TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.623654 %AT, 1694339 nt, 12012 terms. Intergenic: 0.672503 %AT, H2T: 253832 nt, 2131 terms; T2T: 64413 nt, 1373 terms; H2H: 51059 nt, 802 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|24378532|ref|NC_004350.1| Streptococcus mutans UA159, complete genome (length 2030921) dnaA 194 - 1552 + | chromosomal replication initiation protein TERM 1 2140 - 2128 - g 74 -4.9 -4.99645 | opp_overlap 2128 ATTTTAGAAACAAAA TTGTT AAA AACAA TTATTTCTGAAACAG dnaN 1708 - 2844 + | DNA polymerase III subunit beta TERM 2 2847 - 2867 + F 93 -8.3 -5.29782 | opp_overlap 2847 2848 2850, overlap 2850 TCGCACAAACTAAAA TGACGCCTA TTA TAGGCGTTG TTTTTTGTCAATATG TERM 3 2864 - 2850 - f 82 -10 -3.23921 | opp_overlap 2847 2850, overlap 2848 2847 CACAAACTAAAATGA CGCCTA TTA TAGGCG TTGTTTTTTGTCAAT TERM 4 2850 - 2864 + F 93 -10 -4.73105 | opp_overlap 2850 2848 2847, overlap 2847 CACAAACTAAAATGA CGCCTA TTA TAGGCG TTGTTTTTTGTCAAT SMU.05 3106 - 3297 + | hypothetical protein TERM 5 3385 - 3402 + F 93 -6.3 -5.54403 | opp_overlap 3385 TGAATTTTATATTAA GCTTGTT AATT GACAAGC TTTTTCTTATTTTTT TERM 6 3908 - 3898 - g 75 -8.2 -3.7282 | TGAGTCTATTAATAA GCGC TAT GCGC GTGTAGAAAAAATTG TERM 7 3934 - 3921 - g 75 -3.1 -5.24129 | CGCGTGTAGAAAAAA TTGCA CGTA CGCAA AAAGATAAGGATTCT SMU.06 3461 - 4576 + | translation-associated GTPase pth 4663 - 5232 + | peptidyl-tRNA hydrolase TERM 8 7188 - 7202 + G 72 -8.6 -3.23216 | opp_overlap 7187 AAGTAGCGATGAGAG CTGCTT TTA AAGCAG TTAATGATGATAAAC trcF 5234 - 8722 + | putative transcription-repair coupling factor SMU.09 8852 - 9124 + | hypothetical protein SMU.10 9111 - 9482 + | hypothetical protein SMU.11 9482 - 9601 + | hypothetical protein TERM 9 9797 - 9783 - g 73 -3.6 -5.055 | GTAAGGTTCAAAAAA TAAAAC TTG GTTCTA AATTTAAAATTAGGT SMU.12 9632 - 10846 + | hypothetical protein TERM 10 10925 - 10953 + G 74 -5.3 -4.77986 | overlap 10949 TAATAGCTGTATCAG GTGGGGTAGATTC GAT GAATTTGCTGCAC TTTTTGCATATTTAC TERM 11 11214 - 11226 + G 74 -5.5 -4.82855 | TCATGCTAATGATCA GGCTG AGA CAGTC TTTTTACGTTTACTC SMU.13 10843 - 12114 + | putative cell-cycle protein hprT 12118 - 12660 + | hypoxanthine-guanine phosphoribosyltransferase TERM 12 13294 - 13261 - g 70 -6.9 -3.78934 | opp_overlap 13267, overlap 13267 GCTGGTGCAGAAGAA GAAAAACAAGAACTT ATTG AAGTTGTTGATTTTC TAAAAGATCCTAAAC TERM 13 13288 - 13267 - g 79 -4.5 -5.34365 | opp_overlap 13267, overlap 13261 GCAGAAGAAGAAAAA CAAGAACTT ATTG AAGTTGTTG ATTTTCTAAAAGATC ftsH 12682 - 14652 + | putative cell division protein FtsH TERM 14 14827 - 14774 - f 72 -7.2 -3.8591 | gap 2, opp_overlap 14777 14783, overlap 14783 TGGCATAACTAACAA TATTAATAAGGGGATTTGGTTTTGTA CTAT TATAAAACCAAATCCCCT--TTAATT TTGTTGTAATTTATC TERM 15 14777 - 14825 + F 100 -13.6 -4.86902 | gap 1, opp_overlap 14774 14783, overlap 14783 CATAACTAACAATAT TAATAAGGGGATTTGGTTTTGTA CTAT TATAAAACCAAATCCCCTT-TAA TTTTGTTGTAATTTA TERM 16 14820 - 14783 - f 100 -17.3 -3.85878 | opp_overlap 14783 14777, overlap 14774 TAACAATATTAATAA GGGGATTTGGTTTTGTA CTAT TATAAAACCAAATCCCC TTTAATTTTGTTGTA TERM 17 14783 - 14820 + F 100 -19.5 -4.35361 | opp_overlap 14774 14783, overlap 14777 TAACAATATTAATAA GGGGATTTGGTTTTGTA CTAT TATAAAACCAAATCCCC TTTAATTTTGTTGTA SMU.16 15140 - 16555 + | putative amino acid permease SMU.18 16624 - 16761 + | hypothetical protein TERM 18 18766 - 18744 - f 95 -10.6 -4.30809 | overlap 18745 GAATAGCTAGTAAAA GCCCTATAGC GCA GCTATAGGGA AACAAAAAAGAAACC TERM 19 18765 - 18745 - f 100 -14.1 -3.17762 | overlap 18744 AATAGCTAGTAAAAG CCCTATAGC GCA GCTATAGGG AAACAAAAAAGAAAC TERM 20 19102 - 19083 - f 95 -12.2 -3.62275 | opp_overlap 19082 19081 AGGCAGGAGGGCAAA CCAGAGTG TTTA CACTCTGG GGTTGTAGGACTGCG TERM 21 19159 - 19144 - f 77 -7.6 -3.98114 | overlap 19146 AAGGGAATAGAAGAA GACTCT GGGA AGAGTC GCCAGAGAGAGTAAG TERM 22 23412 - 23397 - f 89 -9 -4.51238 | opp_overlap 23407 TTTATAAAAGATAAA CCAAGC ATAG GCTTGG GCGCGTAGCTCAGCT TERM 23 23589 - 23611 + F 72 -5.7 -4.50661 | gap 1, opp_overlap 23589 ATTCTCCGTAGTAAA CGAGATTATC TATT GATA-TCTCG TTTTAATTATACGTT mreC 23655 - 24464 + | putative cell shape-determining protein MreC mreD 24466 - 24972 + | putative cell shape-determining protein MreD TERM 24 25434 - 25422 - g 73 -4.1 -5.02074 | GTAGTGCTCAAAAAA GTAAC GCA GCTAC CAGCTATATTAATGC TERM 25 25768 - 25745 - g 74 -6 -4.57569 | gap 1, overlap 25747 25760 TTAGTTGCTCAAAAA GCG-GCAGC AGAGGAA GCTGCACGC CAAGCAGCAGCAGCA gbpB 25082 - 26377 + | putative secreted antigen GbpB/SagA; putative peptidoglycan hydrolase TERM 26 26388 - 26417 + F 100 -10.3 -4.99056 | opp_overlap 26388 26394, overlap 26394 ACTAATTTAATATTA TAAAAAGGTAAGA TTTA TCTTATCTTTTTA TTTTTCCTTATATTC TERM 27 26394 - 26411 + F 85 -4.9 -5.67529 | opp_overlap 26388 26394, overlap 26388 TTAATATTATAAAAA GGTAAGA TTTA TCTTATC TTTTTATTTTTCCTT TERM 28 26993 - 27009 + G 70 -8.7 -3.21416 | overlap 26996 TCGTGGTATGTGTGG CAGCGAC TAT GTCGTTG TTAGTCCTGACCATG prs 26502 - 27470 + | ribose-phosphate pyrophosphokinase TERM 29 27474 - 27488 + F 93 -6.4 -5.626 | opp_overlap 27474 ACTTTTAACTAGGAA TCGCTG AAA TAGCGA TTTTTTTATAGGATG SMU.24 27559 - 28734 + | aromatic amino acid aminotransferase recO 28724 - 29479 + | DNA repair protein RecO plsX 29687 - 30685 + | putative glycerol-3-phosphate acyltransferase PlsX acpP 30687 - 30935 + | acyl carrier protein TERM 30 30966 - 30992 + F 87 -5.2 -5.59564 | GTTGTTAATAATGGA GGGTTTAGTTAT ATG AAAGCTAAATCC TTTTTTTAAATTTCT TERM 31 31011 - 31026 + F 71 -7.6 -3.52477 | overlap 31009 TTTTAAATTTCTCAG GTGACA TTTT TGTCAC TACTTTTTTTGCATT SMU.28 31163 - 31744 + | putative ATP-binding protein TERM 32 31747 - 31771 + F 100 -7.2 -5.81622 | opp_overlap 31747, overlap 31738 GATGACTCTTTGAAA GATTGTTCGT TAAAT GCGAACGATC TTTTTTTAGTTTTAT SMU.29 31867 - 32574 + | phosphoribosylaminoimidazole-succinocarboxamide synthase TERM 33 32625 - 32614 - g 79 -4.4 -5.24129 | TTTGTTGAGAAAAAA GCTA ACTT TAGC ATTAAATCGGAGTCA TERM 34 33905 - 33895 - g 77 -6.8 -4.56597 | opp_overlap 33895 GTCGTGCGTGAAAAA CCAG AAG CTGG TGATGTGGTCATCCT purL 32584 - 36309 + | putative phosphoribosylformylglycinamidine synthase, (FGAM synthase) TERM 35 36707 - 36677 - g 79 -7 -4.62872 | gap 1 ATGAATGGTTAAAAA GTAGCAA-TCTCC ATACGA GGAGAGCTGCTAC AGAAGGGTTAAGAAT SMU.31 36331 - 36951 + | hypothetical protein TERM 36 37974 - 37962 - g 70 -9.1 -3.07816 | overlap 37970 CCTTTATCCAGCCAA CGCAG GAA CTGCG TGAGCAAGGGGTTCG purF 36977 - 38416 + | amidophosphoribosyltransferase TERM 37 38812 - 38800 - g 70 -2.7 -5.04385 | TAGATTTGTAAAAAA TCTAG AAC CTAAA CTTGTTGATGATGAG SMU.33 38633 - 38914 + | hypothetical protein purM 38960 - 39982 + | phosphoribosylaminoimidazole synthetase purN 39982 - 40536 + | phosphoribosylglycinamide formyltransferase SMU.36 40643 - 41350 + | hypothetical protein purH 41377 - 42939 + | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase TERM 38 42999 - 43021 + T 82 -6.3 -5.07275 | overlap 42993 TATCGCTAACAACGA GAGGAGATG CAAGT CGTCTTCTC TTTTTGTATGTCTAA SMU.38c 43664 - 43122 - | putative transcriptional regulator SMU.39 43832 - 44341 + | hypothetical protein TERM 39 44493 - 44477 - f 82 -7.9 -4.60924 | opp_overlap 44478, overlap 44478 TAAATCTCCTAAAAA GCCCGCT TCA AGCGGGT TTTTCATTTTGGTTT TERM 40 44492 - 44478 - f 88 -11.4 -3.35832 | opp_overlap 44478, overlap 44477 AAATCTCCTAAAAAG CCCGCT TCA AGCGGG TTTTTCATTTTGGTT TERM 41 44478 - 44492 + F 100 -11.4 -5.13016 | opp_overlap 44477 44478 AAATCTCCTAAAAAG CCCGCT TCA AGCGGG TTTTTCATTTTGGTT SMU.40 44518 - 44679 + | hypothetical protein SMU.41 44663 - 44764 + | hypothetical protein SMU.42 44831 - 45709 + | hypothetical protein TERM 42 45717 - 45734 + F 74 -4.1 -5.23316 | opp_overlap 45721 ATAAATAGACAGGAA GTAAGCT AGAA GGCTTGC TTTTTTGGTATAATA TERM 43 46968 - 46955 - g 79 -3.9 -5.42131 | opp_overlap 46955 TAATTACAGAAAAAA TTCAT GTTT ATGAA TTAGATGCTCAAACA SMU.43 45781 - 47160 + | putative site-specific DNA-methyltransferase restriction-modification protein SMU.44 47171 - 47782 + | DNA mismatch repair protein SMU.45 47969 - 49570 + | hypothetical protein TERM 44 49660 - 49650 - g 76 -2.6 -5.42131 | overlap 49643 GAATTAGAGAAAAAA TTTT CTA AAAA GGGCTATAGTGTTGA SMU.46 49572 - 50207 + | hypothetical protein SMU.47 50207 - 50815 + | hypothetical protein TERM 45 50864 - 50881 + F 100 -11.3 -5.08255 | TATTTTTATTCCCCC GCACCAC ATCA GTGGTGC TTTTCTTTTCCGAAT purD 51039 - 52298 + | phosphoribosylamine--glycine ligase TERM 46 52934 - 52918 - g 74 -9.5 -3.1372 | overlap 52916 GATGGTTCAGCAAGA CATAGTC GGA GACTATG GTCAGGTTCAAGCAG SMU.49 52358 - 53539 + | hypothetical protein purE 53862 - 54350 + | phosphoribosylaminoimidazole carboxylase catalytic subunit purK 54337 - 55428 + | phosphoribosylaminoimidazole carboxylase ATPase subunit SMU.52 55428 - 56093 + | hypothetical protein TERM 47 56166 - 56155 - g 72 -5.8 -4.52669 | AAGAAGGCAAAGAAA CCAC CGTT GTGG AAGTGCTCTTTGCCA SMU.53 56109 - 56324 + | hypothetical protein SMU.54 56331 - 57023 + | putative amino acid recemase SMU.55 57125 - 57388 + | hypothetical protein SMU.56 57408 - 57536 + | hypothetical protein SMU.58 57639 - 58934 + | hypothetical protein purB 59244 - 60542 + | adenylosuccinate lyase TERM 48 60574 - 60551 - f 83 -6.6 -4.83032 | opp_overlap 60554, overlap 60554 AGACTAAATACAAAA CAAGGCGGCC GATG GGCTGCCTTT TATGCTATAATCAAG TERM 49 60571 - 60554 - f 85 -8.3 -4.49132 | opp_overlap 60554, overlap 60551 CTAAATACAAAACAA GGCGGCC GATG GGCTGCC TTTTATGCTATAATC TERM 50 60554 - 60571 + F 95 -10.5 -4.52047 | opp_overlap 60554 60551 CTAAATACAAAACAA GGCGGCC GATG GGCTGCC TTTTATGCTATAATC SMU.60 60562 - 61248 + | DNA alkylation repair enzyme TERM 51 61244 - 61264 + F 93 -9.9 -4.52589 | opp_overlap 61243 61242 AAGCTAGCAAATATT TATGATAAG CCG CTTATCATA TTTTATATCACACGA TERM 52 61363 - 61378 + F 83 -8.2 -4.26903 | overlap 61371 ATAAATTCTTTTATT GCGGCC TTGC GGTCGC TTTTAATAAGCTAGC SMU.61 61631 - 62545 + | putative transcriptional regulator TERM 53 62533 - 62556 + T 100 -11.8 -5.41143 | opp_overlap 62536 GCAAAAAGATTCTCA GAACGGGACA TAAA TGTCCTGTTC TTTTTTTGAAGGATC TERM 54 62950 - 62896 - T 72 -8.9 -2.67803 | opp_overlap 62906 62943, overlap 62906 CTGGGACTAAAGTCA CTAACTAAAACAGAGACTCACAT TACAATCAC ACGTGAATCTCTGTTTTTCTTAG CTGAGAAATCTTTTT TERM 55 62940 - 62906 - T 79 -7.3 -4.45945 | opp_overlap 62906, overlap 62896 AGTCACTAACTAAAA CAGAGACTCACAT TACAATCAC ACGTGAATCTCTG TTTTTCTTAGCTGAG TERM 56 63001 - 63050 + T 95 -10.4 -4.40963 | gap 1, opp_overlap 63001 63013, overlap 62997 63005 63007 63013 AGTAAATCTATTAAT GGCATGCTAAAAGGTGTG-ATTT CTAAT AAATACACACCTTTTAGTATATC TTGTTTTTAGAGGAT TERM 57 63005 - 63046 + T 91 -12 -3.47868 | gap 1, opp_overlap 63001 63013, overlap 63001 62997 63007 63013 AATCTATTAATGGCA TGCTAAAAGGTGTG-ATTT CTAAT AAATACACACCTTTTAGTA TATCTTGTTTTTAGA TERM 58 63007 - 63044 + T 90 -12.4 -3.29246 | gap 1, opp_overlap 63001 63013, overlap 63005 63001 62997 63013 TCTATTAATGGCATG CTAAAAGGTGTG-ATTT CTAAT AAATACACACCTTTTAG TATATCTTGTTTTTA SMU.63c 64920 - 63079 - | hypothetical protein TERM 59 65029 - 64990 - H 83 -9.7 -3.94933 | opp_overlap 65000, overlap 65000 TCAACTTTAAAAATA TAATAAAAAAGAATGAT AACTTG ATCATTCTTTTTTACCA CCGTTCTATTATATC TERM 60 65019 - 65000 - H 85 -5.1 -5.66338 | opp_overlap 65000, overlap 64990 AAATATAATAAAAAA GAATGAT AACTTG ATCATTC TTTTTTACCACCGTT TERM 61 65000 - 65019 + H 75 -5.1 -5.01732 | opp_overlap 65000 64990 AAATATAATAAAAAA GAATGAT AACTTG ATCATTC TTTTTTACCACCGTT TERM 62 65440 - 65461 + G 79 -5.8 -4.89477 | overlap 65430 TATTTGGTCCTCCTG GCCTTGGT AAGACC ACCATGGC TTTTGTTATTGCCAA ruvB 65217 - 66251 + | Holliday junction DNA helicase B SMU.65 66289 - 66714 + | putative protein tyrosine-phosphatase TERM 63 67033 - 67056 + G 73 -9.6 -3.05294 | overlap 67036 67038 CGGTCATGGCCGCTT TAAGTCCAGC ATGG GCTGGTCTTA TGTTGGCGAGTTTAA TERM 64 67038 - 67051 + G 71 -8.1 -3.41024 | overlap 67036 67033 ATGGCCGCTTTAAGT CCAGC ATGG GCTGG TCTTATGTTGGCGAG SMU.66 66779 - 67162 + | hypothetical protein TERM 65 67977 - 68005 + G 91 -12.5 -3.08679 | overlap 67979 TTTAGCCAGTCTATT CACGGCTGTAATG GTT TATTCCAGCCGTG TCTTAAATGACCAAA TERM 66 67979 - 68003 + G 74 -9.3 -3.10344 | overlap 67977 TAGCCAGTCTATTCA CGGCTGTAATG GTT TATTCCAGCCG TGTCTTAAATGACCA SMU.67 67159 - 68949 + | putative acyltransferase SMU.68 69215 - 69292 + | hypothetical protein TERM 67 69304 - 69327 + F 100 -9.6 -5.19328 | TTAATATTTTGTGAA GGTTGGGACA AAAG TGTTCCGACC TTTTTATTGTGCGGT TERM 68 69504 - 69520 + F 70 -7.3 -3.66356 | opp_overlap 69502 69504 ACAACAAAATCAACA TCGCAGT TTC ATTGCGA TTTACCATTACCGAT TERM 69 69801 - 69815 + G 70 -2.8 -5.13521 | CCAAGAAGTTGCCAA GTTGGT TTT ATCAGC TTTTTTGGATGATTT thrC 69631 - 71115 + | threonine synthase TERM 70 71121 - 71144 + F 91 -7.4 -5.25699 | opp_overlap 71121 AGGAATTTAACAGGA GGCTGGAACA AAAG TGTTCCGACC TTTTTATTGTGTAGT SMU.71 71523 - 72872 + | putative cation efflux pump (multidrug resistance protein) SMU.72 73231 - 73497 + | hypothetical protein TERM 71 73742 - 73754 + G 72 -7.7 -3.8646 | GTTAATAAGCGTGTA TCGGT TAC ACCGA TTTCAATTATTGGTG SMU.73 73517 - 74854 + | hypothetical protein TERM 72 74861 - 74883 + F 100 -11.4 -5.17488 | opp_overlap 74860 74863 AAAAATTAAGTAGAG CACTTGCAAG TCT TTTGCAAGTG TTTTCTTTTAATGTT SMU.74 74927 - 75637 + | hypothetical protein TERM 73 75767 - 75751 - g 77 -6.5 -4.67982 | overlap 75753 CGGTAGGGAACAAAA CGCAGCA AGC TGCTGAG ACAAAAAAGAGCAAA SMU.75 75621 - 76370 + | putative D-alanyl-D-alanine carboxypeptidase SMU.76 76374 - 76961 + | putative N-acetyl-muramidase TERM 74 77067 - 77087 + F 70 -8.4 -3.17051 | opp_overlap 77073, overlap 77070 TCAAGCTATATTCTT CAACAATC AAAAC GATTGTTG TCTTGATACTAACAG fruA 77576 - 81847 + | fructan hydrolase; exo-beta-D-fructosidase; fructanase, FruA TERM 75 81854 - 81887 + F 79 -6.9 -4.66163 | opp_overlap 81858, overlap 81858 AAGGATTGATTAAAG TAAACCTCTAGAT TTTGACGC GTCTAGAGGTTTG TTTTTGGCTAACAAT TERM 76 81858 - 81883 + F 74 -5.5 -4.89063 | opp_overlap 81858, overlap 81854 ATTGATTAAAGTAAA CCTCTAGAT TTTGACGC GTCTAGAGG TTTGTTTTTGGCTAA TERM 77 82190 - 82211 + G 73 -6.7 -4.29227 | opp_overlap 82190 GGAGCATTTTGAAAA TTTAGGAGT AGCT ATTCCTAAA TTTGTTAATGGTTGG fruB 81918 - 83477 + | fructan hydrolase; exo-beta-D-fructosidase; FruB TERM 78 83509 - 83535 + F 100 -6.7 -5.69068 | TCTTAAGTCGGATTT TTAGCACTC AAGCAGAAA GAGTGCTAA TTTTTTGTATTTTTC hrcA 83652 - 84686 + | heat-inducible transcription repressor TERM 79 84930 - 84911 - g 70 -5.8 -4.35524 | gap 1, overlap 84914 TGCTGAAATGCAAAA CATTCAGCG TCG CGCT-AATG AAGAGCGACAAAGTT grpE 84729 - 85268 + | heat shock protein GrpE (HSP-70 cofactor) TERM 80 85404 - 85379 - f 100 -14.9 -3.54424 | CCCGATGTGGTGAAA GTTTCAGTAGC TTGC GCTACTGAAAC AAGGGGATTTTTTGG dnaK 85642 - 87480 + | molecular chaperone DnaK TERM 81 87502 - 87478 - f 72 -7.3 -3.92373 | opp_overlap 87483, overlap 87483 GAGTTTACGGAGAAA TAAAATAGTTC AGT GGACTATTTTA TCCCGAGCTTGAAAA TERM 82 87678 - 87700 + F 93 -9.9 -4.64766 | opp_overlap 87677 87680 AGCCCAAATTAAATT CAGAGGTTG CAAAC CAGCCTCTG TTTTTGGAATATGGC TERM 83 88212 - 88191 - g 70 -2.9 -5.1356 | GGCGATGAACAAAAA CGTGCTGCT TATG ATCAGTACG GTCCAGCTGGAGCTA dnaJ 88008 - 89141 + | heat shock protein DnaJ (HSP-40) TERM 84 89159 - 89196 + F 100 -6.5 -5.73978 | gap 1, opp_overlap 89159 TGTGTTAATATAAGA GCAATCGTAGTTGGCT TGGGCAT AGTC-ATTACGATTGC TTTTTTATTTCTCAT truA 89443 - 90192 + | tRNA pseudouridine synthase A thiD 90182 - 90949 + | phosphomethylpyrimidine kinase SMU.86 90936 - 91400 + | hypothetical protein SMU.87 91445 - 92008 + | hypothetical protein TERM 85 92084 - 92041 - T 100 -18.4 -4.16033 | opp_overlap 92041 92048, overlap 92048 TGGAAATAAGAATAA GCATAAAGCCCTCATTAGAA ATCA TTCTAATGAGGGCTTTTAGC GTTTGTGGTCTGTTT TERM 86 92041 - 92084 + T 100 -18.4 -3.03782 | opp_overlap 92041 92048, overlap 92048 TGGAAATAAGAATAA GCATAAAGCCCTCATTAGAA ATCA TTCTAATGAGGGCTTTTAGC GTTTGTGGTCTGTTT TERM 87 92048 - 92077 + T 100 -18.1 -4.26189 | opp_overlap 92041 92048, overlap 92041 AAGAATAAGCATAAA GCCCTCATTAGAA ATCA TTCTAATGAGGGC TTTTAGCGTTTGTGG TERM 88 92077 - 92048 - T 100 -18.1 -4.16767 | opp_overlap 92048 92041, overlap 92041 AAGAATAAGCATAAA GCCCTCATTAGAA ATCA TTCTAATGAGGGC TTTTAGCGTTTGTGG SMU.88c 93036 - 92179 - | mechanosensitive ion channel SMU.89c 94063 - 93254 - | putative nitrite transporter TERM 89 95159 - 95175 + G 70 -8.7 -3.15056 | opp_overlap 95155 95158, overlap 95147 95158 ACTGCATACAATGAT GCTGTTG AAG CAGCAGC TATTGACTTAGCGGT tig 94301 - 95584 + | trigger factor TERM 90 95621 - 95589 - T 79 -3.5 -5.67283 | opp_overlap 95594 AAGTTAAATAAAAAA TAAAAGCTAGATG GGAGAAA CATCTGGCTTTTT GAGTGCAAAAAATGT TERM 91 95594 - 95616 + T 71 -5.6 -4.65895 | opp_overlap 95589 AAATAAAAAATAAAA GCTAGATG GGAGAAA CATCTGGC TTTTTGAGTGCAAAA SMU.92c 95861 - 95724 - | putative putative transposase SMU.93c 96090 - 95980 - | putative putative transposase SMU.94c 96461 - 96291 - | putative putative transposase TERM 92 96637 - 96614 - H 74 -9 -3.13475 | gap 1, opp_overlap 96616, overlap 96636 GAATTCCATACCTAA GATTTGAG-CC TAA GGTCTCAAATC TTCCGAGTGCCTGAA TERM 93 96644 - 96671 + H 100 -17.2 -4.36914 | opp_overlap 96636 TCTCAAATCTTCCGA GTGCCTGAAACT TTAA AGTTTCAGGCAC TTTTATCACGGCGGA rpoE 97086 - 97670 + | DNA-directed RNA polymerase subunit delta TERM 94 97741 - 97762 + F 74 -2.9 -5.48054 | overlap 97742 TTTGAGGTCAGAATA AGCTCTCTA CTTG TAGGGGGCA TTTTTTCATTTTCCT pyrG 97804 - 99414 + | CTP synthetase TERM 95 99498 - 99543 + F 100 -19.5 -5.49729 | opp_overlap 99498 99502 ACTTTTGCTTATAAA GAAACACCTTCTTAAATCT CATTTACT AGATTTAAGAAGGTGTTTC TTTTTTTGGATCATT TERM 96 99543 - 99498 - f 100 -19.5 -3.85817 | opp_overlap 99498, overlap 99502 ACTTTTGCTTATAAA GAAACACCTTCTTAAATCT CATTTACT AGATTTAAGAAGGTGTTTC TTTTTTTGGATCATT TERM 97 99539 - 99502 - f 100 -14.5 -4.55295 | opp_overlap 99498, overlap 99498 TTGCTTATAAAGAAA CACCTTCTTAAATCT CATTTACT AGATTTAAGAAGGTG TTTCTTTTTTTGGAT TERM 98 100052 - 100066 + F 80 -7.2 -4.61482 | CTGTTTTTTTAAGTT TTTTGC CAT GCAAAA TTATTTTTTAGCAGC TERM 99 100424 - 100442 + F 100 -8.9 -5.9218 | opp_overlap 100421 100424 CTCTCCGCAAAGTGA GCTGACT GTTCA AGTCAGC TTTTTTTGTTGTCTA TERM 100 100442 - 100424 - f 72 -8.9 -2.64155 | opp_overlap 100424, overlap 100421 CTCTCCGCAAAGTGA GCTGACT GTTCA AGTCAGC TTTTTTTGTTGTCTA TERM 101 100548 - 100536 - f 71 -7.7 -3.38207 | AAATAAACAACGTAA TGGGT TTG ACCCA AAAAATATTTAGGAG fbaA 100574 - 101455 + | fructose-bisphosphate aldolase TERM 102 101493 - 101529 + F 77 -3.2 -5.60556 | overlap 101485 GATTCTCTTTCCCTA GACTGAGGAAAT CCTATTTTGGATA ATTTCTTCAGTC TTTTTGTTTTCTCTT SMU.100 101780 - 102271 + | putative sorbose PTS system, IIB component SMU.101 102284 - 103081 + | putative sorbose PTS system, IIC component SMU.102 103071 - 103892 + | putative PTS system, IID component SMU.103 103889 - 104305 + | putative PTS system, IIA component SMU.104 104305 - 106500 + | putative alpha-glucosidase; glycosyl hydrolase TERM 103 107386 - 107357 - g 81 -10.1 -3.76968 | opp_overlap 107345 AAGGCAGTTATCAAA TTGCTTCCATTAG GCAG CCAGTGGAAGCAA TGGTGAAGGCAGCTG SMU.105 106501 - 107499 + | putative transcriptional regulator; repressor of sugar transport operon SMU.106c 107970 - 107734 - | putative putative transposase TERM 104 108318 - 108329 + H 83 -5.8 -5.26316 | opp_overlap 108318 ATCACTAACAGCATA GTCC AAAT GGAC TTTTTTGTGGACTAA TERM 105 108975 - 108950 - H 73 -9.2 -2.91274 | opp_overlap 108950, overlap 108952 GCTAGTTTAATTATA GATTGAAGAA TAATGT TTCTTCAATC TTTTTTATATGTCAA TERM 106 108950 - 108975 + H 100 -9.2 -5.4251 | opp_overlap 108950 108952 GCTAGTTTAATTATA GATTGAAGAA TAATGT TTCTTCAATC TTTTTTATATGTCAA SMU.107 109108 - 109278 + | hypothetical protein SMU.108 109280 - 109417 + | hypothetical protein SMU.109 109582 - 110682 + | permease (efflux protein) TERM 107 110792 - 110815 + T 100 -10.4 -5.16133 | opp_overlap 110792 ATTTCTAGCAAAAAA GAACGCTTGA GTTG TCAAGTGTTC TTTTTATCTTATAGT TERM 108 110815 - 110792 - T 93 -8.2 -5.14965 | opp_overlap 110792 ATTTCTAGCAAAAAA GAACGCTTGA GTTG TCAAGTGTTC TTTTTATCTTATAGT mutR 111684 - 110824 - | putative transcriptional regulator MutR TERM 109 111919 - 111885 - R 100 -16 -4.81752 | opp_overlap 111885 AAAAATACTTAAAAA GAGAGTAGAGAACA TTACGTT TGTTCTCTACTCTC TTTTTGCTTTGAGCT TERM 110 111885 - 111919 + r 100 -16 -4.99134 | opp_overlap 111885 AAAAATACTTAAAAA GAGAGTAGAGAACA TTACGTT TGTTCTCTACTCTC TTTTTGCTTTGAGCT SMU.112c 112694 - 111945 - | putative transcriptional regulator SMU.113 112823 - 113755 + | putative fructose-1-phosphate kinase SMU.114 113760 - 115160 + | putative PTS system, fructose-specific IIBC component TERM 111 115363 - 115331 - g 86 -12.2 -2.82933 | opp_overlap 115342, overlap 115343 TCTGAAGGTACTACA GGCATGATGGAA-GGC TTT GCCATTCC-TCATGCC AAAGACAAAAGTATA SMU.115 115175 - 115627 + | putative PTS system, fructose-specific IIA component TERM 112 115949 - 115925 - g 71 -3.5 -5.15634 | overlap 115927 TAGCTTACGAAAAAA CGGGTTATGAT GCG AACACAACCAG TCGTTTGCCAGATTG lacD2 115645 - 116634 + | tagatose 1,6-diphosphate aldolase TERM 113 116695 - 116722 + T 77 -4.3 -5.31456 | opp_overlap 116692 116695, overlap 116687 116698 AGTCGTATAAAAGAA GAATTATTCAT TTAAGT ATGAATAATCC TTTTTTATGAATTCA TERM 114 116722 - 116695 - T 70 -6.5 -4.31397 | opp_overlap 116695 116687 116698, overlap 116692 AGTCGTATAAAAGAA GAATTATTCAT TTAAGT ATGAATAATCC TTTTTTATGAATTCA SMU.117c 118090 - 116735 - | hypothetical protein TERM 115 117148 - 117132 - G 79 -2.2 -5.61689 | AAAAGTAATAAAAAA CTTGCT GTACT AGCCAG TAAACAAACGATAGT TERM 116 117485 - 117473 - G 89 -6.3 -5.55855 | TGTAAAAAAAGAAAA TAGCA GCA TGCTA ATGGCTGGAAAAAAA TERM 117 118454 - 118431 - R 100 -9.6 -5.19328 | ACTGTACAATAAAAA GGTTGGAACA TTTT TGTTCCAGCC TCAATAAAAGAACCG SMU.118c 119547 - 118705 - | putative esterase adh 120676 - 119558 - | putative alcohol dehydrogenase class III TERM 118 120882 - 120862 - H 72 -4.7 -4.74801 | overlap 120866 CAAGTCTATTAAAAA TCAGGCCAT GTT ATGGCATAA GAAATCATTCAAAGT rpmB 121103 - 121291 + | 50S ribosomal protein L28 dinF 122672 - 121344 - | putative DinF, damage-inducible protein; cation efflux pump (multidrug resistance protein) TERM 119 122259 - 122243 - G 73 -4.3 -4.87291 | TATTGTAAGCAAAAA GTGGGAC TAA GCCCAAC AAAATAATTTTTAAA TERM 120 122512 - 122537 + g 80 -7.5 -4.36914 | overlap 122515 AGCGTAACGACTTGG GTACTGGCTCC GACA GCAGCCAGTCC TTTTGTACCCACAAG TERM 121 122948 - 122971 + G 72 -2.4 -5.23316 | opp_overlap 122957, overlap 122950 ATCAGATTGAGATGC CGCTTGAAAT GAAG AATTCAAGGG TTTTTTCATCTGCTG TERM 122 124351 - 124381 + G 91 -12.6 -3.03635 | opp_overlap 124350 124360 124361, overlap 124360 GGGATCACAGATCAG CATGTGAAAGGGGC TAA GCCCATTTCACAAG TATTGCAGGAATTTC TERM 123 125788 - 125759 - g 75 -6.5 -4.37092 | gap 1, overlap 125760 125761 ATTTGCCTGATAAAA TCT-GTTCGGAATG CGG CACTCCGTACAAGA AAGATGGTCAGGATA TERM 124 125785 - 125761 - g 71 -9.3 -2.52946 | overlap 125760 125759 TTGCCTGATAAAATC TGTTCGGAATG CGG CACTCCGTACA AGAAAGATGGTCAGG polC 122905 - 127302 + | DNA polymerase III PolC TERM 125 127314 - 127339 + F 100 -12.1 -5.27476 | opp_overlap 127313 TTAATGTGATAGGAG GTTAGGATAAA ATTT TTTATCCTAAC TTTTATTTTATTAAA SMU.124 127505 - 127954 + | MarR family transcriptional regulator TERM 126 128553 - 128534 - g 74 -5 -4.93296 | opp_overlap 128543 128546, overlap 128537 128546 GTATCAGCAGAAAAA TTAGCAGA ATTA TCTGCTCA GGCAGATGCTCTATT SMU.125 128033 - 128587 + | hypothetical protein TERM 127 128700 - 128757 + F 100 -20.4 -3.33344 | opp_overlap 128708 128711, overlap 128702 128708 CGGTTTGCTGTCTGG TACTAAAAGAACACTTGAAGTTCATT CTTAAC AATGAGCTTCAAGTGTTCTTTTTGTG TCTTAACTTTTTTAT TERM 128 128702 - 128755 + F 100 -20.8 -3.20915 | opp_overlap 128708 128711, overlap 128700 128708 GTTTGCTGTCTGGTA CTAAAAGAACACTTGAAGTTCATT CTTAAC AATGAGCTTCAAGTGTTCTTTTTG TGTCTTAACTTTTTT TERM 129 128708 - 128749 + F 100 -18.4 -5.10064 | opp_overlap 128708 128711, overlap 128702 128700 TGTCTGGTACTAAAA GAACACTTGAAGTTCATT CTTAAC AATGAGCTTCAAGTGTTC TTTTTGTGTCTTAAC TERM 130 128749 - 128708 - f 100 -16.2 -4.25104 | opp_overlap 128708 128702 128700, overlap 128711 TGTCTGGTACTAAAA GAACACTTGAAGTTCATT CTTAAC AATGAGCTTCAAGTGTTC TTTTTGTGTCTTAAC TERM 131 128746 - 128711 - f 100 -12.1 -4.25256 | opp_overlap 128708 128702 128700, overlap 128708 CTGGTACTAAAAGAA CACTTGAAGTTCATT CTTAAC AATGAGCTTCAAGTG TTCTTTTTGTGTCTT adhA 128963 - 129958 + | putative acetoin dehydrogenase (TPP-dependent), E1 component alpha subunit TERM 132 130325 - 130297 - g 70 -8.1 -3.32963 | ACCCCTATTTCAGAA GCAGCCATTGCAG GAT CTGCAGTAGGTGC CGCTCAAACTGGACT adhB 130090 - 131103 + | putative acetoin dehydrogenase (TPP-dependent), E1 component beta subunit TERM 133 131543 - 131521 - g 76 -2.8 -5.42198 | gap 1, overlap 131496 GCTGAAAAAACAAAA GCAA-TGTC TTCTCC GACAGTTGC AGCAGCCCCTCAAGG adhC 131203 - 132570 + | branched-chain alpha-keto acid dehydrogenase subunit E2 adhD 132644 - 134389 + | putative dihydrolipoamide dehydrogenase lplA 134495 - 135484 + | putative lipoate-protein ligase SMU.132 135749 - 136885 + | putative hippurate amidohydrolase SMU.133c 138402 - 137008 - | putative MDR permease; transmembrane efflux protein TERM 134 139177 - 139161 - g 100 -6.5 -5.69793 | opp_overlap 139161 ACACCAAATAAAAAA GACTGGC ATA GACAGTC TTGATCTGATTATTA SMU.134 138553 - 139206 + | TetR/AcrR family transcriptional regulator mleR 140364 - 139471 - | putative transcriptional regulator TERM 135 139534 - 139572 + g 74 -5.4 -4.78266 | overlap 139537 ATCAGGTGTTAAGGT TGAGGATTTTAAGTAAGC GTA GTTAACATAAAATCCTAA TTTATTATTTTCTTT SMU.136c 140907 - 140554 - | putative transcriptional regulator TERM 136 140960 - 140977 + H 78 -5.7 -4.75289 | opp_overlap 140960 140976, overlap 140950 TTTTATACAATACTA TGTATTA TATG TAATACA TTTTATGTTATAATA TERM 137 141401 - 141386 - g 70 -7.6 -3.6581 | overlap 141384 ACCATCCTGAAAATA TTGAGG CTAC CCTCAA AAATGCGGCAGGTGA TERM 138 142139 - 142123 - g 83 -10.9 -3.66666 | opp_overlap 142123, overlap 142115 GTTAAAACCGTGAAA CCAACCA TCT TGGTTGG TACCTCAACAAATCC mleS 141022 - 142644 + | malate dehydrogenase SMU.138 142800 - 143744 + | putative malate permease TERM 139 144857 - 144867 + G 74 -5.4 -4.72986 | TGACGAAACGTTGGT CTTC GTT GAAG TTTTTCGTAACCCTG SMU.139 143865 - 145049 + | hypothetical protein TERM 140 145919 - 145898 - g 74 -5.9 -4.66833 | gap 1, opp_overlap 145912, overlap 145899 145900 145912 CTCCAATTGGAAAAA GC-CGGCATA GAA TATACCGAGC GCGGAATCTCTGTTG SMU.140 145133 - 146428 + | putative glutathione reductase SMU.141 146430 - 147131 + | hypothetical protein TERM 141 147165 - 147138 - T 100 -13.6 -4.43911 | opp_overlap 147138 AAATCCTAATGAAAA TCCCTGAGTTTA AATT CAAACTCAGGGA TTTTTCTATAATGTA TERM 142 147138 - 147165 + T 100 -12.9 -5.02502 | opp_overlap 147138 AAATCCTAATGAAAA TCCCTGAGTTT AAATTC AAACTCAGGGA TTTTTCTATAATGTA TERM 143 147316 - 147334 + T 75 -2.5 -5.65513 | overlap 147318 AATCAAAAGTAAACC TTCTTTT ATTTC AAAAGGA TTTTTTTCATTGATG def 147909 - 147295 - | peptide deformylase TERM 144 147611 - 147624 + g 70 -5.9 -4.28791 | GCATAGGCTTCTTTA GGCGG ATTG CCGTC TTTATCTTCTGGATT TERM 145 147682 - 147716 + g 78 -5.4 -5.02074 | overlap 147683 TGAAATATCTAATTG CGGAGCAGCGAGACCG ACA CCGCCGCGCAGCTCCA TTTTTTCAGCAGTCA TERM 146 147683 - 147715 + g 74 -8.9 -3.60762 | overlap 147682 GAAATATCTAATTGC GGAGCAGCGAGACCG ACA CCGCCGCGCAGCTCC ATTTTTTCAGCAGTC SMU.144c 148631 - 147984 - | putative transcriptional regulator TERM 147 148651 - 148666 + H 88 -6.2 -5.47159 | TTCCTCTTCGTCATT TATGAC ATAT GTCATA TTTTTCTTTGTTAAA SMU.145 148736 - 149920 + | hypothetical protein TERM 148 149908 - 149927 + F 81 -4.3 -5.46698 | opp_overlap 149908 149909, overlap 149909 TAAAACAAATAGAAA TCTCAGA AAATAA TCTGAGG TTTTTTAATTTTCAA TERM 149 150030 - 150001 - f 80 -5.9 -5.03747 | overlap 149989 AAATTTGGGAAAAAA TTCACAAAAAGAC TTGC ATTTTTTTGTGAA AAGGGTTACAATGAC TERM 150 151501 - 151480 - g 71 -6.5 -4.19238 | TCTTGAATGTGAAAA CTGTTGCGA AACG CCGCAACCG TCCTCAATGGGTTCG adhE 150120 - 152789 + | bifunctional acetaldehyde-CoA/alcohol dehydrogenase TERM 151 152812 - 152827 + F 100 -11.8 -5.50499 | TCGTTTAGCAGTCAG GCCCGC TTAT GCGGGC TTTTTTTGCCTCTCG TERM 152 152865 - 152847 - f 86 -9.6 -4.07568 | opp_overlap 152850 TTTGCCTCTCGAAAA CCACTAGC TAT GCTAGTAG TTCCGGAAACTTTTA SMU.149 152999 - 153301 + | putative transposase TERM 153 153537 - 153556 + F 100 -12.2 -4.56133 | opp_overlap 153537 CAGTCGCAGAACAAA CCACCAGT TCAC ACTGGTGG TTTTGATTGTTAGCC TERM 154 153556 - 153537 - f 100 -12.2 -4.31433 | opp_overlap 153537 CAGTCGCAGAACAAA CCACCAGT TCAC ACTGGTGG TTTTGATTGTTAGCC TERM 155 153879 - 153859 - g 70 -6.9 -3.72588 | TAATGGACAGCCAAA CACTTTCAA CTG TTGAAGGTG GGAAGGTATCGGGTG SMU.150 153813 - 154016 + | hypothetical protein SMU.151 154025 - 154261 + | hypothetical protein SMU.152 154456 - 154875 + | hypothetical protein TERM 156 154959 - 154975 + F 83 -6.7 -4.87665 | AATTATGGAGGAGGA TTAACTA TGA TAGTTAA TTTTTATCAATACAA SMU.153 155368 - 155469 + | hypothetical protein TERM 157 156141 - 156127 - f 71 -2.1 -5.45802 | opp_overlap 156138 156139, overlap 156128 156139 TTGCTAAAATAAAAA CTGTC GTAGA GACAA GAAACTTTTTCTTGG rpsO 156212 - 156481 + | 30S ribosomal protein S15 TERM 158 156559 - 156528 - f 70 -7.4 -3.73775 | opp_overlap 156535 CGTAGCTTGATTAAA TAAAAAAGCTGTCC ATTA GGATGGCTTTTTTA GCTGTAGCAAGTCAA TERM 159 156535 - 156552 + F 80 -5.5 -5.1287 | opp_overlap 156528 TGATTAAATAAAAAA GCTGTCC ATTA GGATGGC TTTTTTAGCTGTAGC TERM 160 156824 - 156863 + F 74 -9.6 -2.78547 | gap 1, opp_overlap 156824, overlap 156828 CGCTAAAATAGATAA TAAAGCCCTTGTTAGGTAT CTA AT-CTTAGTAAGGGCTTTA TAGTTGATAAGCTCA pnpA 157228 - 159420 + | polynucleotide phosphorylase/polyadenylase TERM 161 159456 - 159474 + GF 77 -4.6 -5.13521 | TGGCACTCAGAAGTT TTATCAAG GAA CCTGATAA TTTTTTAAATAGTTT SMU.156 159410 - 160150 + | hypothetical protein cysE 160110 - 160778 + | putative serine acetyltransferase; serine O-acetyltransferase cysS 160852 - 162195 + | cysteinyl-tRNA synthetase SMU.159 162188 - 162607 + | hypothetical protein TERM 162 162702 - 162720 + F 72 -2.4 -5.43866 | opp_overlap 162693, overlap 162693 162704 AATCCACTATAAAAA TAGTTTTC AAT GAAGGCTG TTTTTTTACCGCTTG SMU.160 162786 - 163691 + | metallopeptidase TERM 163 164063 - 164051 - g 70 -7.7 -3.56155 | opp_overlap 164051 164050, overlap 164049 GACCAATATCAAACA GAAGC AGA GCTTC GTTATGGGAAAACAT SMU.161 163670 - 164407 + | putative transcriptional regulator TERM 164 164448 - 164411 - T 79 -10.1 -2.95388 | opp_overlap 164412, overlap 164419 TATTTAACTTAGATA GTGTAAAAGGCAAAG GTAGATTT CTTTGCCTTTTACAT TTGTTTTATTGAATT TERM 165 164412 - 164447 + T 100 -14.3 -4.88795 | opp_overlap 164411 164419 ATTTAACTTAGATAG TGTAAAAGGCAAAGG TAGATT TCTTTGCCTTTTACA TTTGTTTTATTGAAT SMU.162c 165435 - 164443 - | hypothetical protein SMU.163c 166178 - 165624 - | hypothetical protein TERM 166 165749 - 165737 - G 75 -7.7 -4.14392 | opp_overlap 165740 GGCTAAGGCTGAAAA GTTGC TGG GCAAC AGCTGTATCGTTATG TERM 167 165960 - 165974 + g 79 -3.6 -5.42265 | overlap 165947 TTCCCGACCTTCTTG GGTTAT TCG ATAATC TTTTTTCTCCTTTCC TERM 168 166210 - 166235 + H 85 -9.3 -3.97406 | opp_overlap 166208 166210, overlap 166205 TCTACCTCCAGAATA TTTATATTCTA TTAC TAGAATATAAA TTTGTCAAATTTTAA TERM 169 166235 - 166210 - H 77 -9.3 -3.22475 | opp_overlap 166205 166210, overlap 166208 TCTACCTCCAGAATA TTTATATTCTA TTAC TAGAATATAAA TTTGTCAAATTTTAA TERM 170 166775 - 166759 - g 75 -8.1 -3.71213 | ATACAGAATTTGAAA TGCTTTT AAA AAAAGCA GAGCGAGAAGATAAT SMU.164 166491 - 167237 + | putative tRNA/rRNA methyltransferase TERM 171 167447 - 167421 - g 73 -2.9 -5.24129 | TGTTGTTAGAAAAAA TCGCTGCTGGC AGTAA ACCAACGACGA GTCAAGTGAATGTTG TERM 172 168045 - 168031 - g 100 -2.8 -6.04324 | opp_overlap 168031 168032, overlap 168032 TGAAAAAATAAAAAA TGTAGT CAC ACTACC TTTAGGCCCTGTCAT SMU.165 167261 - 168121 + | hypothetical protein TERM 173 168131 - 168152 + F 88 -6.7 -5.26119 | opp_overlap 168131 AGATAAAGAGAGAAA TCAGATAAG TTAG TTTATCTGA TTTTATTTTTCAAAA SMU.166 168253 - 168768 + | hypothetical protein SMU.167 168768 - 169214 + | hypothetical protein SMU.168 169211 - 169405 + | putative transcriptional regulator TERM 174 169648 - 169677 + F 83 -5.7 -5.30189 | opp_overlap 169648 AAAAATTTATAATTA TCAGCCTGTAAGT CTTG ACTTTGGGGCTGA TTTTTTGATATTATA TERM 175 169837 - 169808 - g 71 -4.3 -4.76123 | gap 1, overlap 169815 169817 AAATCATGAACAAAA CAACAT-ACATGGC TAA GCCAGGTGAAGTTG AACGTAAATGGTACA rplM 169798 - 170244 + | 50S ribosomal protein L13 rpsI 170269 - 170661 + | 30S ribosomal protein S9 TERM 176 170689 - 170714 + F 100 -10.5 -5.46698 | opp_overlap 170689, overlap 170709 TACAGCATTTTCAAA CACTTCATGGT TCAC ACCATGGGGTG TTTTTTGATTTTCAA SMU.172 170983 - 171228 + | putative cell growth regulatory protein SMU.173 171222 - 171554 + | putative ppGpp-regulated growth inhibitor TERM 177 171594 - 171568 - T 100 -7.4 -5.49729 | opp_overlap 171568 AATGAGCTAAAAAAA GATTTCAGTTAA ACT TCTACTGAAATC TTTTTTATTTTATTT TERM 178 171568 - 171594 + T 95 -5.3 -5.95449 | opp_overlap 171568 AATGAGCTAAAAAAA GATTTCAGT TAAACTTCT ACTGAAATC TTTTTTATTTTATTT SMU.174c 172543 - 171752 - | hypothetical protein TERM 179 172673 - 172703 + H 80 -7.6 -4.18018 | overlap 172675 TCAAAAGCACAAACT CTCCTCTTAAGTAT AAT AGACTTAGGAGGTG TTTTGAATGACAGAA TERM 180 172675 - 172701 + H 77 -8.8 -3.69216 | overlap 172673 AAAAGCACAAACTCT CCTCTTAAGTAT AAT AGACTTAGGAGG TGTTTTGAATGACAG SMU.175 172710 - 172838 + | hypothetical protein SMU.176 172926 - 173081 + | hypothetical protein TERM 181 173866 - 173877 + G 84 -2.2 -5.72616 | ATATTTTTATCTTTT GGTG GCGT CATC TTTTTTTCTCTGGGT SMU.177 173245 - 174465 + | hypothetical protein SMU.178 174443 - 175291 + | hypothetical protein TERM 182 175305 - 175322 + F 71 -5.6 -4.61566 | opp_overlap 175305, overlap 175300 175316 AAGAGGAATTAAAAA TCTTCC AATAAC GGAAGA TTTTCTGCTTTAACA TERM 183 175322 - 175305 - f 80 -6.3 -4.92777 | opp_overlap 175305 175300 175316 AAGAGGAATTAAAAA TCTTCCA ATAA CGGAAGA TTTTCTGCTTTAACA TERM 184 175595 - 175605 + G 79 -6.8 -4.83169 | opp_overlap 175582 AAGACAGCTCCAGCT GCAG TGA CTGC TTTTTCTAAAAAGAT SMU.179 175433 - 176035 + | hypothetical protein TERM 185 176236 - 176224 - g 80 -7.7 -4.43012 | ACTTTAACACTAAAA TCAGC CAA GCTGA TGGAGTCATTATTGC TERM 186 178261 - 178246 - g 72 -9 -3.37533 | opp_overlap 178243, overlap 178239 CTCGAAAACCAGCAA CCCATC ATAC GATGGG CGGTTTGAAGATTGA SMU.180 176037 - 178448 + | putative oxidoreductase; fumarate reductase TERM 187 178496 - 178542 + F 74 -3.9 -5.243 | opp_overlap 178509 CCTTTTTGGTAAATT CTCCTCAAATAATGAGTGAC-AT CAA ATCGTCTCTC-TTATAAGAGGAG TTTTTTGATCATTTA SMU.181 178654 - 179652 + | putative mevalonate kinase TERM 188 179704 - 179744 + F 100 -16.4 -5.19879 | ACTAATCGGTGAATC GCACTGTCGAAGTTAGAT GTCCG ACCTAACTTTGACAGTGC TTTTTATATTTAAAG TERM 189 179808 - 179847 + F 89 -10.5 -3.78235 | opp_overlap 179803 179808 179813, overlap 179809 TCGGAATTAATTACA TCTAATATAAAAATTAA CTTGAC TTAATTTTTATATTAGG TTATATTACTTATAA TERM 190 179809 - 179846 + F 88 -11.8 -2.86218 | opp_overlap 179803 179808 179813, overlap 179808 CGGAATTAATTACAT CTAATATAAAAATTAA CTTGAC TTAATTTTTATATTAG GTTATATTACTTATA sloA 179874 - 180596 + | iron/manganese ABC transporter ATP-binding protein sloB 180593 - 181432 + | putative Mn/Zn ABC transporter TERM 191 182059 - 182041 - g 81 -3.1 -5.65927 | TAGCCAAAGAAAAAA TCAGTCG TATCC CTACTGA GAAGAAAATGATCGT sloC 181479 - 182399 + | ABC transporter SMU.185 182383 - 182520 + | hypothetical protein sloR 182584 - 183237 + | putative metal-dependent transcriptional regulator TERM 192 183344 - 183382 + T 77 -8.4 -3.86015 | gap 1, opp_overlap 183333 183344 183348, overlap 183348 AAATTTTCGCATAAA TAAAGCTTCCATG-CAT GCTTGA AAGTCATGGAAGCTTTA TTTATGCGAAAGATG TERM 193 183382 - 183344 - T 77 -8.4 -3.8709 | gap 1, opp_overlap 183344 183348, overlap 183333 183348 AAATTTTCGCATAAA TAAAGCTTCCATG-CAT GCTTGA AAGTCATGGAAGCTTTA TTTATGCGAAAGATG SMU.187c 184394 - 183417 - | hypothetical protein hslO 185313 - 184381 - | Hsp33-like chaperonin SMU.189 185427 - 185633 + | hypothetical protein TERM 194 187638 - 187616 - T 95 -10.6 -4.30809 | overlap 187617 GAATAGCTAGTAAAA GCCCTATAGC GCA GCTATAGGGA AACAAAAAAGAAACC TERM 195 187637 - 187617 - T 100 -14.1 -3.17762 | overlap 187616 AATAGCTAGTAAAAG CCCTATAGC GCA GCTATAGGG AAACAAAAAAGAAAC TERM 196 187974 - 187955 - T 95 -12.2 -3.62275 | opp_overlap 187954 187953 AGGCAGGAGGGCAAA CCAGAGTG TTTA CACTCTGG GGTTGTAGGACTGCG TERM 197 188031 - 188016 - T 77 -7.6 -3.98114 | overlap 188018 AAGGGAATAGAAGAA GACTCT GGGA AGAGTC GCCAGAGAGAGTAAG TERM 198 191074 - 191059 - T 89 -9 -4.51238 | opp_overlap 191069 TTTATAAAAGATAAA CCAAGC ATAG GCTTGG GCGCGTAGCTCAGCT TERM 199 191955 - 191982 + T 100 -12.9 -5.16472 | opp_overlap 191952 GCCGGTATAGTACTA GCCTAGTAGAA AGCTTA TTCTACTAGGC TTTTTTAAGATTTTT SMU.191c 193192 - 192029 - | putative integrase TERM 200 192308 - 192325 + g 79 -4.2 -5.20735 | TTCTAGACCATAGTG GAAGAA AAGAAA TTCTTC TTTGTTTTTTATTCG TERM 201 192919 - 192934 + g 85 -2.6 -5.68438 | TTTGATAATTTTTCT TTGTCT CTTG AGATAA TTTTTTCTTTGGTCG TERM 202 193152 - 193127 - G 89 -7.7 -5.09426 | TCTAATTTCAAAAAA GAAAAGACC TGATTTTT GGTCTTTTC TAATCCGTGGATTGA SMU.193c 193384 - 193199 - | hypothetical protein SMU.194c 193639 - 193388 - | bacteriophage P2 associated TERM 203 193686 - 193663 - R 95 -10.4 -4.208 | TTTCAAAACTATAAA GAGCAAGTTC CTTC AAACTTGCTC ATACGTCGCTTCAAA SMU.195c 193935 - 193675 - | hypothetical protein SMU.196c 195050 - 193953 - | putative transfer protein TERM 204 195084 - 195097 + r 74 -3.9 -5.1861 | opp_overlap 195084 TCCTTAAGTCTGAAA TAAAG ACTG CTTTA TTTTTTCCTGCTGAC SMU.197c 197498 - 195072 - | hypothetical protein TERM 205 197221 - 197231 + g 74 -5.4 -4.78107 | TGCAAACGATCATCA GCTT TAG AAGC TTTTTGATAATCCTC SMU.198c 200041 - 197498 - | putative conjugative transposon protein TERM 206 198802 - 198785 - G 79 -2.1 -5.5112 | gap 1, overlap 198787 GCGATCAATAAAAAA GAGATTTT CAC AAAATC-C ATCAATTTCAACAGG TERM 207 198801 - 198787 - G 72 -5.8 -4.39002 | overlap 198785 GATCAATAAAAAAGA GATTTT CAC AAAATC CATCAATTTCAACAG TERM 208 199614 - 199624 + g 73 -4 -5.08169 | GTACTGTCTAGAGTC GTTT TTA AAAC TTTTTTCAAATCTAT SMU.199c 200441 - 200061 - | hypothetical protein SMU.200c 200697 - 200470 - | hypothetical protein SMU.201c 201690 - 200710 - | putative transposon protein SMU.202c 202179 - 201706 - | hypothetical protein TERM 209 202071 - 202054 - G 85 -2.7 -5.73978 | ACCACAAACAAAAAA GGCATCA TCTC TAATACC TCTTTCAGACATACG SMU.204c 202430 - 202302 - | hypothetical protein TERM 210 202480 - 202457 - R 100 -7.5 -5.93252 | CTCAAAAACAAAAAA CGGTTAGCT TTTAAT AACTAACCG CTTGCAATATTTTTA SMU.205c 202765 - 202493 - | hypothetical protein SMU.206c 203269 - 202868 - | hypothetical protein TERM 211 203000 - 202974 - GR 84 -4.5 -5.54894 | gap 1, opp_overlap 202974 AATTCATCAAAAAAA GGCTGCCTAG CTTCTTGT CTAG-CAGCC TTTTCAATAGCATTC SMU.207c 204464 - 203232 - | putative transposon protein TERM 212 204324 - 204310 - GR 70 -2.8 -5.08824 | opp_overlap 204319, overlap 204311 TTTCGATTCAAAAAA TGAAAC AGC GTTTCT TCAAACTCTTTTGTA TERM 213 204559 - 204580 + r 86 -10.1 -3.61715 | TTGTGTTAGTTCTAA CCCCCCTAT TAGT ATCGGGGGG TTATTAAAAAGCGTC SMU.208c 206423 - 204699 - | putative transposon protein; DNA segregation ATPase SMU.209c 206864 - 206439 - | hypothetical protein SMU.210c 207199 - 206888 - | hypothetical protein SMU.211c 207862 - 207419 - | hypothetical protein SMU.212c 208113 - 207865 - | hypothetical protein TERM 214 208079 - 208057 - G 100 -8.6 -5.52079 | opp_overlap 208057 AGACGAAAATAAAAA GTTATCATAA ACT TTACGATAAC TTGCCTTACAATAAT SMU.213c 208327 - 208136 - | hypothetical protein SMU.214c 208663 - 208355 - | hypothetical protein SMU.215c 208872 - 208672 - | hypothetical protein TERM 215 208965 - 208947 - R 81 -3.2 -5.72207 | overlap 208948 208950 TCCAAACTAAAAAAA CTATACTA ATT TAGTACAA CCCCACGTTTAAACC SMU.216c 209266 - 208952 - | hypothetical protein TERM 216 209384 - 209365 - R 77 -2.9 -5.63517 | TTTCCAAACAAAAAA TGCACAA TTTTAT TTGTACA TTTAATTAAGATACT SMU.217c 209913 - 209386 - | hypothetical protein TERM 217 210410 - 210449 + H 82 -5 -5.4833 | GTCTAAGTTAGATTA GTGTGTTATTCAGTTCTG CCTG CAGAGTTGTCTGACGCAC TTTTTTATTCAATAA TERM 218 210558 - 210589 + H 77 -9 -3.31461 | opp_overlap 210560 210569, overlap 210560 210565 210567 AAATGAGGTTAACTA GATTTTTAACAGTT ATTT AACTGTTAAAAATA TTATACAGCTAAATA TERM 219 210560 - 210587 + H 88 -11.6 -3.22475 | opp_overlap 210560 210569, overlap 210558 210565 210567 ATGAGGTTAACTAGA TTTTTAACAGTT ATTT AACTGTTAAAAA TATTATACAGCTAAA TERM 220 210587 - 210560 - H 86 -11.6 -2.91452 | opp_overlap 210560 210558 210565 210567, overlap 210569 ATGAGGTTAACTAGA TTTTTAACAGTT ATTT AACTGTTAAAAA TATTATACAGCTAAA TERM 221 210567 - 210608 + H 71 -8.4 -3.27012 | gap 1, opp_overlap 210560 210569 210593 210595, overlap 210560 210558 210565 TAACTAGATTTTTAA CAGTTATTTAACTGT-TAA AAATA TTATACAGCTAAATAACTG TATTGTCAATAGTTT TERM 222 210621 - 210633 + H 88 -3.5 -6.04324 | CTGTATTGTCAATAG TTTTT TTG AAAAA TTTTTTATTTTTTAA TERM 223 210923 - 210900 - g 78 -10.4 -3.17725 | opp_overlap 210899 210898 210902, overlap 210897 210898 CTTGAAAAAGAACTA GACAGAGCTA TTGA TAACTCTGTC GGTTTTGAAGGAAAA SMU.218 210660 - 211013 + | putative transcriptional regulator SMU.219 211020 - 211451 + | hypothetical protein TERM 224 211533 - 211510 - T 88 -8.9 -4.27316 | opp_overlap 211510 TTTGGCAACGGAAAA GCCCTAGCT TGGCAG AGCTAAGGC TTTTTTTACACAGCT TERM 225 211510 - 211533 + T 100 -7.4 -5.40474 | opp_overlap 211510 TTTGGCAACGGAAAA GCCCTAGCTT GGCA GAGCTAAGGC TTTTTTTACACAGCT SMU.220c 212222 - 211770 - | hypothetical protein SMU.221c 213113 - 212568 - | putative integrase TERM 226 212865 - 212855 - G 86 -5.4 -5.54264 | opp_overlap 212853 212855 AAAGATCTAAAAAAA TGAC ATT GTCA TCATTTATTATATAA TERM 227 212963 - 212974 + g 75 -4.4 -5.1417 | TCGGAACTTTTCTAA CAGA TTCT TCTG TTTTTGGTTTTGTCC SMU.222c 213704 - 213510 - | integrase fragment SMU.223c 213856 - 213755 - | hypothetical protein SMU.224c 214355 - 213906 - | hypothetical protein SMU.225c 214449 - 214336 - | hypothetical protein SMU.226c 215092 - 214544 - | putative transposase TERM 228 215440 - 215451 + r 83 -5.8 -5.26316 | opp_overlap 215440 ATCACTAACAGCATA GTCC AAAT GGAC TTTTTTGTGGACTAA SMU.227c 216404 - 215841 - | hypothetical protein SMU.228 216789 - 217154 + | putative alkaline-shock protein TERM 229 217936 - 217959 + G 81 -9.8 -3.74224 | opp_overlap 217942, overlap 217939 CTATGTTAAAGATTT TAATTACGAA AATT TTCGTAATTA TTTAAATAATTTAGG TERM 230 217939 - 217956 + G 72 -7.1 -3.99347 | opp_overlap 217942, overlap 217936 TGTTAAAGATTTTAA TTACGAA AATT TTCGTAA TTATTTAAATAATTT SMU.229 217154 - 218821 + | hypothetical protein TERM 231 218830 - 218845 + F 85 -3.2 -6.09196 | AGAATAAGAAATCAA GTCGTT TGCT GACGGC TTTTTTTCTTTTGGA ilvB 218987 - 220690 + | acetolactate synthase catalytic subunit TERM 232 221141 - 221120 - g 77 -6.6 -4.57569 | overlap 221122 TTACGGGGTGAAAAA TATCGCTC GTACGG GAGCGACA GGCTTTACTAGAGAT TERM 233 221139 - 221122 - g 72 -7 -3.90316 | overlap 221120 ACGGGGTGAAAAATA TCGCTC GTACGG GAGCGA CAGGCTTTACTAGAG ilvH 220683 - 221165 + | acetolactate synthase 3 regulatory subunit ilvC 221232 - 222254 + | ketol-acid reductoisomerase TERM 234 222264 - 222296 + F 93 -9.4 -4.58395 | opp_overlap 222262 222264 222272, overlap 222272 AACTAAAATAAATGA TATGAAAAGTTGGA TGTGT TCCAGCTTTTTATA TTTTTAAAGAATGGC TERM 235 222272 - 222288 + F 81 -4.4 -5.36364 | opp_overlap 222272 222264 222262, overlap 222264 TAAATGATATGAAAA GTTGGA TGTGT TCCAGC TTTTTATATTTTTAA TERM 236 222383 - 222405 + F 78 -5.7 -4.8048 | opp_overlap 222383 TGTATAATAAATAAA CACTTAATA TTACT TGTTAAGTG TTTTTAATGTCAAAC ilvA 222495 - 223745 + | threonine dehydratase SMU.235 223800 - 224687 + | hypothetical protein TERM 237 224730 - 224761 + T 100 -11 -5.69473 | opp_overlap 224730 TGATAGCAGAAAAAA CTCCCAACTTTCAT ATTT ATGGAAATTGGGAG TTTTTTTCTAGTCTG TERM 238 224761 - 224730 - T 100 -11 -5.34555 | opp_overlap 224730 TGATAGCAGAAAAAA CTCCCAACTTTCAT ATTT ATGGAAATTGGGAG TTTTTTTCTAGTCTG SMU.236c 225451 - 224810 - | putative transcriptional regulator SMU.237c 226700 - 225477 - | putative integral membrane protein SMU.238c 227416 - 226697 - | putative ABC transporter, ATP-binding protein TERM 239 227545 - 227583 + r 74 -9.8 -2.78032 | opp_overlap 227545, overlap 227544 227542 227547 TAAACGAAACAAAAA TACAAGAGTAAGGCGA TAATGGC TCTTCTTACTCTTGTA CTATTTTAAAAACAA TERM 240 227583 - 227545 - R 100 -7.6 -5.41941 | opp_overlap 227545 227544 227542 227547 TAAACGAAACAAAAA TACAAGAGTAAGGCGA TAATGGC TCTTCTTACTCTTGTA CTATTTTAAAAACAA SMU.239c 228202 - 227612 - | hypothetical protein TERM 241 228492 - 228471 - R 100 -7.3 -5.46698 | opp_overlap 228472 228480, overlap 228472 TGTAAAACTAAAAAA CCTGCTAAG TTTG CCTAGCAGA TTTTAGATAAGTTTA TERM 242 228491 - 228472 - R 79 -8.6 -3.86392 | opp_overlap 228472 228480, overlap 228471 GTAAAACTAAAAAAC CTGCTAAG TTTG CCTAGCAG ATTTTAGATAAGTTT SMU.241c 229245 - 228505 - | putative ABC transporter, ATP-binding protein; amino acid transport system TERM 243 229182 - 229192 + g 72 -5.4 -4.56775 | TTAGAGAAATGTCTT TGAG AAC CTCA TTTTTGCCGAAGGAT SMU.242c 230798 - 229245 - | putative amino acid ABC transporter, permease protein, glutamine transport system TERM 244 231509 - 231490 - H 71 -8.6 -2.88544 | TTCCATGCTCATACA GGCTACTT TAAA AAGCAGCC TAAAGTCACTCAAAA TERM 245 232684 - 232656 - g 91 -10.5 -4.81249 | opp_overlap 232656 232655 232658 TTTGAAAGTTAAAAA TATTCATTTGCAG AAC CCACAAATGAATA CTTATCTTGAGATCA SMU.243 231574 - 232851 + | hypothetical protein uppP 232909 - 233754 + | undecaprenyl pyrophosphate phosphatase TERM 246 234543 - 234531 - g 72 -7.7 -3.74693 | GTTCAGCTCATTAAA GCAGA TGC TCTGC AAGAATTACAAATGA mecA 233844 - 234566 + | adaptor protein TERM 247 235336 - 235321 - g 71 -3.2 -5.055 | opp_overlap 235322 235326, overlap 235322 235323 TCAAGGGTTAAAAAA TGCAAC GGCA GTTGCT GTTGTCACCCCTATC rgpG 234572 - 235732 + | putative glycosyl transferase N-acetylglucosaminyltransferase), RgpG TERM 248 235751 - 235762 + F 95 -5.8 -5.89921 | opp_overlap 235751 TTAGACAAGAAGAAA GTCC AATT GGAC TTTTTTTGTTATAAT TERM 249 235762 - 235751 - f 74 -5.8 -4.55093 | opp_overlap 235751 TTAGACAAGAAGAAA GTCC AATT GGAC TTTTTTTGTTATAAT TERM 250 235954 - 235965 + G 74 -5.8 -4.62069 | TTTCAGCAGCTATTA TGGG AAAT CCCA TTTTTGAAGTGACAC TERM 251 236037 - 236049 + G 70 -2.6 -5.08601 | GAAGTTGATGAGCGA GCTC GCTTA GGGC TTTTTCTTGCCATGC SMU.247 235806 - 236576 + | putative ABC transporter, ATP-binding protein SMU.248 236614 - 237876 + | putative ABC transporter, membrane protein TERM 252 237966 - 237933 - g 70 -4.7 -4.67048 | gap 1 CCATTTTAAAACAAA TTGTCAATGATGAACC TTT GGTGTATC-TTGACAA TGCAGCTACAACTCA nifS 237881 - 239110 + | putative NifS protein homologue, class-V aminotransferase nifU 239097 - 239531 + | putative nitrogen fixation-like protein, NifU TERM 253 240915 - 240930 + G 75 -7.6 -4.12738 | overlap 240924 TTCCGATGGAGTATG CGATTG AACT CAATCG TTTGATTTCCTATGA SMU.251 239552 - 240967 + | ABC transporter membrane protein TERM 254 240986 - 241021 + F 100 -14.4 -5.67283 | opp_overlap 240986 240996 AAACGTTATGATTAA GTTTTAAAAACAATGA GCTA TCATTGTTTTTAAAGC TTTTTTATTTACATT TERM 255 241021 - 240986 - f 90 -12.2 -3.22491 | opp_overlap 240986, overlap 240996 AAACGTTATGATTAA GTTTTAAAAACAATGA GCTA TCATTGTTTTTAAAGC TTTTTTATTTACATT TERM 256 241011 - 240996 - f 76 -6.2 -4.62872 | opp_overlap 240986, overlap 240986 ATTAAGTTTTAAAAA CAATGA GCTA TCATTG TTTTTAAAGCTTTTT SMU.252 241259 - 242032 + | hypothetical protein TERM 257 242163 - 242196 + T 100 -13.9 -3.70068 | opp_overlap 242159 242169, overlap 242164 242166 ACATCAGCATATCGC ATATCAGCCAGCGCC TAAA GACGCTGGCTGATAA TTTGGGCTTATAGTC TERM 258 242164 - 242195 + T 100 -17.4 -2.81559 | opp_overlap 242159 242169, overlap 242163 242166 CATCAGCATATCGCA TATCAGCCAGCGCC TAAA GACGCTGGCTGATA ATTTGGGCTTATAGT TERM 259 242166 - 242193 + T 100 -15.6 -2.95126 | opp_overlap 242159 242169, overlap 242164 242163 TCAGCATATCGCATA TCAGCCAGCGCC TAAA GACGCTGGCTGA TAATTTGGGCTTATA TERM 260 242190 - 242169 - T 100 -13.7 -2.64243 | opp_overlap 242166 242164 242163, overlap 242159 GCATATCGCATATCA GCCAGCGCC TAAA GACGCTGGC TGATAATTTGGGCTT TERM 261 242222 - 242240 + T 87 -11 -3.52093 | opp_overlap 242225 TAGTCCTAGTGCAGA CCACCTGT TTA ACGGGTGG TTATAATTCAAGTCT dacA 243534 - 242290 - | putative D-alanyl-D-alanine carboxypeptidase; penicillin-binding protein TERM 262 242356 - 242344 - G 75 -7.7 -4.19678 | opp_overlap 242343 242340 242344 CCAGACTTTAAGAAA GAAGC TGC GCTTC ACTTCTTTTTTAGCA oppA 243822 - 245471 + | putative oligopeptide ABC transporter, substrate-binding protein OppA TERM 263 245502 - 245528 + F 100 -9.5 -5.10461 | overlap 245515 CACTTTTACACATGG CAAGGATTGGC TTGAT GCCAGTTCTTG TTTTTATTGGATAGC oppB 245577 - 246491 + | putative oligopeptide transport system, permease protein OppB oppC 246502 - 247533 + | putative transmembrane protein, permease OppC oppD 247543 - 248595 + | putative oligopeptide ABC transporter, ATP-binding protein OppD TERM 264 249222 - 249183 - g 71 -8.1 -3.39483 | opp_overlap 249190 249194, overlap 249182 ATCTCATGCAAAAAC TGCAGCA-TGAACAGGGAC TAAC GTACCTGTTCATTGCT-CA TGATTTATCAATGGT TERM 265 249190 - 249215 + G 79 -10.5 -3.26874 | opp_overlap 249183 249182, overlap 249194 GCAAAAACTGCAGCA TGAACAGGGAC TAAC GTACCTGTTCA TTGCTCATGATTTAT oppF 248588 - 249514 + | putative oligopeptide ABC transporter, ATP-binding protein OppF SMU.260 250170 - 250772 + | hypothetical protein SMU.261c 251945 - 250989 - | putative transcriptional regulator TERM 266 251510 - 251499 - G 74 -5.8 -4.68593 | opp_overlap 251499, overlap 251509 CTTACTATTGAAAAA GGCT ATCA AGCC TGTATAAAACAGAAG TERM 267 251740 - 251725 - G 75 -7.6 -4.0825 | opp_overlap 251725 251723 GTTTTAATGAAAGAA GTTCCT TGAA AGGAAC TGTTGTAATTGGAAG TERM 268 252034 - 252046 + H 70 -4.1 -5.04249 | overlap 252036 GCTTTGTAAAAAAGG CCTAA ACC TTGGG TTTATTTTTTAAAAA TERM 269 252036 - 252050 + H 88 -7.2 -5.00884 | overlap 252034 TTTGTAAAAAAGGCC TAAACC TTG GGTTTA TTTTTTAAAAACGGT TERM 270 252077 - 252094 + H 89 -8.5 -4.59944 | opp_overlap 252077 CGGTTTATTTCATAA GGTTTAG TTAG CTAAACC TTTGTTTGTAATCGT TERM 271 252094 - 252077 - H 74 -8.5 -3.32844 | opp_overlap 252077 CGGTTTATTTCATAA GGTTTAG TTAG CTAAACC TTTGTTTGTAATCGT TERM 272 252184 - 252170 - H 79 -2.8 -5.72207 | opp_overlap 252172 TGGAAATGAAAAAAA TAGAGG AGG CTTCTA TGATGAAAAAAACAG otcA 252184 - 253203 + | putrescine carbamoyltransferase SMU.263 253301 - 254659 + | putative amino acid antiporter SMU.264 254669 - 255778 + | agmatine deiminase arcC 255810 - 256760 + | carbamate kinase TERM 273 256892 - 256937 + T 100 -17.9 -4.71708 | gap 1, opp_overlap 256900, overlap 256893 TTTGATGCAGTGGTT G-GGAGTAAGACTGGAACTGGC TTT GTTAGTTCTAGTCTTACTCCTC TTTTGCTTTATTCTT TERM 274 256893 - 256935 + T 100 -21.6 -3.94086 | opp_overlap 256900, overlap 256892 TTGATGCAGTGGTTG GGAGTAAGACTGGAACTGGC TTT GTTAGTTCTAGTCTTACTCC TCTTTTGCTTTATTC TERM 275 257181 - 257150 - T 100 -11.8 -5.1101 | opp_overlap 257160, overlap 257152 CCATCATTTAAAAAA TCCACCCAAATGTA AGTT TACATTTGGATGAA AAATAAAAAAATGAG TERM 276 257179 - 257152 - T 89 -12.2 -2.78807 | opp_overlap 257160, overlap 257150 ATCATTTAAAAAATC CACCCAAATGTA AGTT TACATTTGGATG AAAAATAAAAAAATG TERM 277 257233 - 257193 - T 95 -4 -6.20267 | opp_overlap 257196, overlap 257194 TGAAAAATAAAAAAA TGAGGCTGGGACAG CAATCATGCGTAT CTGTTCCAGCCTCT TACAGTGTAAAAATG TERM 278 257232 - 257194 - T 80 -7.5 -4.285 | opp_overlap 257196, overlap 257193 GAAAAATAAAAAAAT GAGGCTGGGACAG CAATCATGCGTAT CTGTTCCAGCCTC TTACAGTGTAAAAAT SMU.267c 259536 - 257272 - | bifunctional glutamate--cysteine ligase/glutathione synthetase TERM 279 259897 - 259908 + G 73 -4.4 -4.93877 | opp_overlap 259897 TTAAACTGCATTTAA TTCC GTCA GGAA TTTTCTTTCCTGAAA purA 259734 - 261023 + | adenylosuccinate synthetase TERM 280 261051 - 261070 + F 75 -5 -5.01811 | TTATGCTATAAAAAA GAAGTTGC TTGT GTGACTTC TTTTTCATTTGGTAC ulaA 261355 - 262812 + | ascorbate-specific PTS system enzyme IIC ptxB 262880 - 263161 + | putative PTS system, enzyme IIB component TERM 281 263171 - 263201 + F 71 -8.4 -3.23708 | overlap 263168 263168 263173 AAATAAAAAGCGTAG TGGGTGTCTTCA ATTTTGC TGAAGGCACCTA TAGTTTTTAAGAAAG TERM 282 263173 - 263199 + F 74 -8.8 -3.18031 | overlap 263171 263168 263168 ATAAAAAGCGTAGTG GGTGTCTTCA ATTTTGC TGAAGGCACC TATAGTTTTTAAGAA ptxA 263227 - 263712 + | putative PTS system, enzyme IIA component ulaD 263751 - 264416 + | 3-keto-L-gulonate-6-phosphate decarboxylase TERM 283 264495 - 264507 + G 84 -7.7 -4.73108 | AACGCCTCAACTTTG CCAAG GAA CTTGG TTTTGATTTTGTCGA SMU.274 264422 - 265285 + | putative L-xylulose 5-phosphate 3-epimerase araD 265288 - 265998 + | L-ribulose-5-phosphate 4-epimerase TERM 284 266026 - 266047 + T 100 -8.1 -5.37593 | opp_overlap 266026 TTGTTTCAGATTGAA GACAAACTT TTCG AGGTTTGTC TTTTTTACTTTCAGA SMU.276c 266341 - 266180 - | hypothetical protein SMU.277 266412 - 266663 + | hypothetical protein SMU.278 266907 - 267038 + | hypothetical protein TERM 285 267241 - 267219 - f 80 -9.3 -3.695 | overlap 267217 TTGGAAAAGTAAACA TCTCTCATA AGTAA TATGAGAGA GACTGTTAAAATGAA TERM 286 267297 - 267253 - f 79 -8.2 -4.13728 | gap 1, opp_overlap 267261, overlap 267257 267261 GAGAGACTGTTAAAA TGAATC-AATAGCCTAATTCT TATA AGAATTAGGCTATTTGAGTAA AAATATGTGAATAGA TERM 287 267293 - 267257 - f 100 -13.4 -3.67622 | gap 1, opp_overlap 267261, overlap 267253 267261 GACTGTTAAAATGAA TC-AATAGCCTAATTCT TATA AGAATTAGGCTATTTGA GTAAAAATATGTGAA TERM 288 267288 - 267261 - f 100 -14.4 -3.54177 | opp_overlap 267261, overlap 267257 267253 GTTAAAATGAATCAA TAGCCTAATTCT TATA AGAATTAGGCTA TTTGAGTAAAAATAT TERM 289 267261 - 267288 + F 100 -14.4 -3.65529 | opp_overlap 267261 267257 267253 GTTAAAATGAATCAA TAGCCTAATTCT TATA AGAATTAGGCTA TTTGAGTAAAAATAT SMU.279 267523 - 267732 + | hypothetical protein TERM 290 267734 - 267751 + F 70 -7.1 -3.71075 | opp_overlap 267731, overlap 267731 ATAAAAAAGGATGAT TTCATGT TCTT ACATGAA TCTTTTAGATAGTGT SMU.281 267970 - 268248 + | hypothetical protein TERM 291 269174 - 269189 + F 74 -6.2 -4.49838 | TATTAGAGTGTATTG CCATAA CATT TTATGG TTTATATTTGTTATT SMU.283 269323 - 269541 + | hypothetical protein TERM 292 269917 - 269934 + G 70 -2.7 -5.06451 | gap 1 TTTATTGCTATCACA GCTGTGAG CAT CTT-CAGC TTTTTTAGCATAATA SMU.284 269566 - 269973 + | hypothetical protein SMU.285 270023 - 270199 + | hypothetical protein TERM 293 270238 - 270220 - f 73 -7.5 -3.60818 | opp_overlap 270219 270222, overlap 270212 TTAAAATCTCTTAAA GAGTTGA GATGA TCAACTC ACTTTACTTAAGTAC TERM 294 270558 - 270540 - f 73 -7.5 -3.60818 | opp_overlap 270539, overlap 270532 TTAAAATCTCTTAAA GAGTTGA GATGA TCAACTC ACTCTATTTAAAATA TERM 295 270572 - 270593 + F 78 -6 -4.89852 | opp_overlap 270572 270575 TCACTCTATTTAAAA TAACTCAA CCTAGT TTGAGTTA TTTTTCTGAATATAA TERM 296 272313 - 272287 - g 79 -5.2 -5.30155 | TTATCAATCAAAAAA GGCTCCAA GGTCAGTCTAG TTGGAGCC AGTGGTTCTGGTAAA SMU.286 270628 - 272910 + | putative ABC transporter, ATP-binding protein ComA SMU.287 272924 - 273826 + | putative ComB, accessory factor for ComA TERM 297 273954 - 273972 + F 100 -11.8 -5.1675 | opp_overlap 273957 ATCGCTAATGTCTGA GAAGACCA AAC TGGTCTTC TTTTTTGCTAGCTAC TERM 298 274407 - 274396 - g 76 -3.6 -5.22006 | opp_overlap 274401, overlap 274390 274400 TCATCACAACAAAAA GCAG CCTG CCGC ACTTTGCTAGCAGAT SMU.289 274183 - 275850 + | putative transcriptional regulator TERM 299 276138 - 276099 - f 87 -11 -3.53012 | gap 1, opp_overlap 276100 276104, overlap 276104 CCCTTGCTCTGCAAA CGAT-AGCTCCAACAGTTT GAA AAACTATTGGAGCTTATCT TATTTCGTGAACGGT TERM 300 276100 - 276137 + F 100 -12.3 -4.00042 | gap 1, opp_overlap 276099 276104, overlap 276104 CCTTGCTCTGCAAAC GAT-AGCTCCAACAGTTT GAA AAACTATTGGAGCTTATC TTATTTCGTGAACGG TERM 301 276104 - 276132 + F 100 -13.3 -3.92071 | opp_overlap 276104 276099, overlap 276100 GCTCTGCAAACGATA GCTCCAACAGTTT GAA AAACTATTGGAGC TTATCTTATTTCGTG TERM 302 276132 - 276104 - f 100 -15.5 -3.00525 | opp_overlap 276100 276104, overlap 276099 GCTCTGCAAACGATA GCTCCAACAGTTT GAA AAACTATTGGAGC TTATCTTATTTCGTG TERM 303 276232 - 276243 + F 81 -4.4 -5.50499 | TCAATAAAATAATTT CTGT GAAT ACAG TTTTTTTAAGTCTGA TERM 304 276331 - 276342 + F 73 -4.4 -5.00923 | overlap 276320 276318 CAGTCCAAATGTGAA CACA AGCT TGTG TTTTATTTGGTCTTT TERM 305 276594 - 276583 - g 70 -5.8 -4.25104 | GTGTCTGGATTAAAA CTCC TGGT GGAG CCAATGTGGTTATGG SMU.290 276429 - 277520 + | putative L-ascorbate 6-phosphate lactonase TERM 306 277777 - 277804 + F 90 -11.4 -3.56594 | TGTCTTTAAACTTTA TATCCGCATGTC GCAC GATATGCGGGTA TTTGAAAGAGTTTAA tkt 277894 - 279870 + | transketolase TERM 307 279979 - 280016 + F 100 -10.1 -4.98522 | ATTGATTTTGACCTG CATCTCAAAAGTTAG CCTAAAAT CTAACTTTTGGGGTG TTTTTCTATGAAATT TERM 308 280531 - 280508 - g 74 -5.3 -4.82901 | opp_overlap 280492, overlap 280509 CTGGTTTTACAAAAA GCACAGCTT CCTAAT AAGCTGTGG CAAGAAGAGCTTACT TERM 309 280530 - 280509 - g 74 -8.8 -3.49419 | opp_overlap 280492, overlap 280508 TGGTTTTACAAAAAG CACAGCTT CCTAAT AAGCTGTG GCAAGAAGAGCTTAC SMU.292 280397 - 281398 + | putative transcriptional regulator SMU.293 281529 - 282041 + | hypothetical protein TERM 310 282067 - 282090 + F 88 -6.7 -5.24129 | opp_overlap 282067 ATTTCAGTTATTTAA TCCTGCAAC TTGGTT GATGCAGGA TTTTTTGTGGAAAAG SMU.294 282083 - 282568 + | hypothetical protein SMU.295 282568 - 282951 + | hypothetical protein SMU.296 282969 - 283943 + | hypothetical protein TERM 311 283998 - 284015 + F 93 -6.3 -5.66684 | GATAAAAATGAGGCT TGAGGCA ATAG TGTCTCA TTTTTTTGTGGCTTG polI 284102 - 286738 + | DNA polymerase I SMU.298 286831 - 287259 + | hypothetical protein TERM 312 287410 - 287383 - T 100 -15.8 -5.6473 | opp_overlap 287376 287383 ATAATATCAAAAAAA CACCTCATCTAT TATA ATAGATGAGGTG TTTGCCGTTTATATA TERM 313 287383 - 287410 + T 100 -15.8 -3.75418 | opp_overlap 287383, overlap 287376 ATAATATCAAAAAAA CACCTCATCTAT TATA ATAGATGAGGTG TTTGCCGTTTATATA SMU.299c 287670 - 287452 - | putative bacteriocin peptide precursor tgt 288082 - 289224 + | queuine tRNA-ribosyltransferase SMU.301 289224 - 289787 + | hypothetical protein TERM 314 289948 - 289982 + F 100 -13.9 -3.57651 | opp_overlap 289955 289976, overlap 289955 AGACTTTGTCTACAC TCTGAAATCATCTAG CTCTA CTAGATGATTTTAGA TTATATAATCTAAAA TERM 315 289975 - 289955 - f 80 -9.1 -3.59262 | opp_overlap 289948 289955 GTCTACACTCTGAAA TCATCTAGC TCT ACTAGATGA TTTTAGATTATATAA TERM 316 289955 - 289975 + F 83 -8.4 -4.34267 | opp_overlap 289955, overlap 289948 GTCTACACTCTGAAA TCATCTAG CTCTA CTAGATGA TTTTAGATTATATAA TERM 317 290777 - 290789 + G 70 -7.7 -3.55444 | opp_overlap 290777, overlap 290752 GCGCAGGATTGATAA GGCTT TAG AAGCC TTTAGACAATCGAAA SMU.302 290214 - 291227 + | hypothetical protein TERM 318 291383 - 291362 - g 70 -7.3 -3.85518 | overlap 291352 291355 291363 AAGATGAAGGAACAA CCTCCTATC TCTT GACAGGAGA AGACGGTTTTCAGCT TERM 319 291550 - 291565 + G 75 -7.6 -4.17089 | opp_overlap 291547 291550 291549 CTTTATCCTAAACAT CTTTGG ACGC CCAAAG TTTTACCGATTTACG SMU.303 291304 - 292080 + | hypothetical protein SMU.304 292080 - 292550 + | putative deaminase SMU.305 292547 - 293110 + | hypothetical protein pgi 293667 - 295016 + | glucose-6-phosphate isomerase TERM 320 295070 - 295031 - f 91 -8 -4.98255 | opp_overlap 295036 295041, overlap 295036 295041 GTTTAATGATAAAAA TATAATAAAAGCCAAGGC TGTT GTCTTGGCTTTTATTTTG CCAATTAGTATGCTA TERM 321 295036 - 295065 + F 100 -14.5 -4.15106 | opp_overlap 295031 295036 295041, overlap 295041 ATGATAAAAATATAA TAAAAGCCAAGGC TGTT GTCTTGGCTTTTA TTTTGCCAATTAGTA TERM 322 295065 - 295036 - f 100 -12.3 -4.1472 | opp_overlap 295036 295041, overlap 295031 295041 ATGATAAAAATATAA TAAAAGCCAAGGC TGTT GTCTTGGCTTTTA TTTTGCCAATTAGTA TERM 323 295041 - 295060 + F 100 -10 -5.08255 | opp_overlap 295036 295031 295041, overlap 295036 AAAAATATAATAAAA GCCAAGGC TGTT GTCTTGGC TTTTATTTTGCCAAT TERM 324 295060 - 295041 - f 89 -7.8 -5.0095 | opp_overlap 295041 295036, overlap 295036 295031 AAAAATATAATAAAA GCCAAGGC TGTT GTCTTGGC TTTTATTTTGCCAAT SMU.308 295182 - 295982 + | sorbitol-6-phosphate 2-dehydrogenase TERM 325 297041 - 297055 + G 70 -5.8 -4.23758 | AAAAGTCGCTGGTGA TGATTT AAA AAATCA TTTTGGCTGTCAGCT TERM 326 297189 - 297153 - g 84 -2.2 -5.79595 | gap 1, overlap 297146 297154 297155 TTTCAAAACAAAAAA CGCCGAGTTGCCGTTGT TTGT ACAACGGGA-CGCGGAA CAGCACATATGATAA TERM 327 297455 - 297425 - g 82 -4.8 -5.39721 | TTATCATAGAAAAAA TCTCAAAACAATCA TTT TGACCTTTTCGAGA TTGGTCAAAGCTGCT SMU.309 296004 - 297869 + | regulator of sorbitol operon SMU.310 297869 - 298357 + | sorbitol operon activator SMU.311 298437 - 298979 + | PTS system, sorbitol (glucitol) phosphotransferase enzyme IIC2 SMU.312 299070 - 300080 + | PTS system, sorbitol phosphotransferase enzyme IIBC SMU.313 300122 - 300487 + | putative PTS system, sorbitol-specific enzyme IIA SMU.314 300738 - 300899 + | hypothetical protein TERM 328 301027 - 301043 + F 100 -8 -5.52079 | ACAATGATAGCTTTT GACCTC GAACA GAGGTC TTTTTCTTTTCCTCT SMU.317 301122 - 301820 + | putative tetrahydrodipicolinate succinylase TERM 329 302130 - 302095 - f 95 -5.6 -5.92337 | gap 1, overlap 302097 302104 302121 ACACATCAAAAAAAA TATCTAAAAGCTTGAGT AAG ACTCAAGC-TTCAGACT GAAGACAAACCTATT TERM 330 302128 - 302097 - f 95 -10.4 -4.59226 | gap 1, overlap 302095 302104 302121 ACATCAAAAAAAATA TCTAAAAGCTTGAGT AAG ACTCAAGC-TTCAGA CTGAAGACAAACCTA TERM 331 302122 - 302104 - f 100 -11.8 -4.39347 | overlap 302097 302095 302121 AAAAAATATCTAAAA GCTTGAGT AAG ACTCAAGC TTCAGACTGAAGACA TERM 332 302267 - 302240 - f 88 -8.5 -4.46212 | TCCGCCATGATAAAA GTGTCTGAAAC TTTAAT GTTTCAGGCAC TCGGAAGATTTGAGA TERM 333 302274 - 302297 + F 74 -9 -3.05384 | gap 1, opp_overlap 302276, overlap 302276 TTCAGGCACTCGGAA GATTTGAGACC TTA GG-CTCAAATC TTAACTGACCACGGG TERM 334 302785 - 302770 - g 70 -4.7 -4.61482 | opp_overlap 302770 302768 GTCCTCAAAAAACAA TCGGT TGGCGT ACCGA TATTGATGCGCTTCC TERM 335 303335 - 303351 + G 75 -6.6 -4.4078 | opp_overlap 303349 AACCATCCGAACCCT GACTCA GGACA TGAGTC TTTTGATTCAAAAGC SMU.318 302577 - 303707 + | putative hippurate hydrolase TERM 336 303735 - 303712 - f 100 -11.1 -5.32565 | opp_overlap 303712 GAACGAATTAAAAAA CCTTGCAGA TTTAAG TCTGCAAGG TTTTTTAAGAAAAAG TERM 337 303712 - 303735 + F 100 -11.8 -5.00616 | opp_overlap 303712 GAACGAATTAAAAAA CCTTGCAGAT TTAA GTCTGCAAGG TTTTTTAAGAAAAAG TERM 338 303779 - 303755 - f 100 -13.7 -3.52358 | TTAAGAAAAAGGGAA GGGCATCCAAT TTC ATTGAATGCCC AGGAGATTTATGAAA TERM 339 303827 - 303797 - f 87 -7.7 -4.76041 | opp_overlap 303822 GAGATTTATGAAAAA GGGGAAATAAAAT AGGAA AGTTTATCTCCCC AACCACTTGGGGAAG TERM 340 303827 - 303848 + F 100 -11.7 -4.17023 | overlap 303822 303830 GAAAGTTTATCTCCC CAACCACTT GGGG AAGTGGTTG TTTTAGGATGATTAA TERM 341 303830 - 303845 + F 80 -7.6 -4.20148 | overlap 303822 303827 AGTTTATCTCCCCAA CCACTT GGGG AAGTGG TTGTTTTAGGATGAT TERM 342 304124 - 304107 - g 76 -4.1 -5.24449 | opp_overlap 304107 304107, overlap 304108 GATAAAGCCAAAAAA GTGCTCA GAGA TGAGCAA CTTTTGGAAGAACTT TERM 343 304123 - 304108 - g 72 -7.6 -3.73043 | opp_overlap 304107 304107, overlap 304107 ATAAAGCCAAAAAAG TGCTCA GAGA TGAGCA ACTTTTGGAAGAACT SMU.320 304041 - 304577 + | putative 5-formyltetrahydrofolate cyclo-ligase TERM 344 304912 - 304937 + G 72 -6.1 -4.48743 | opp_overlap 304912 304911 304915, overlap 304915 TATTTGACTCCAAAT GTAGTTGCAGC AGGT GCTTCAACTTC TTTGTTTGGGCTTTT TERM 345 304915 - 304934 + G 73 -6.4 -4.33281 | opp_overlap 304912 304911 304915, overlap 304912 TTGACTCCAAATGTA GTTGCAGC AGGT GCTTCAAC TTCTTTGTTTGGGCT TERM 346 305160 - 305176 + G 72 -5.1 -4.76874 | overlap 305162 AAAACTTTTCTCTCT TAGGCAA CGC TTGCCCA TTTTAATTTTGTATT SMU.321 304564 - 305235 + | hypothetical protein TERM 347 305266 - 305251 - T 84 -6.1 -5.18726 | opp_overlap 305251 305248 TTGTCATAATAAAAA CTCGG TTTAAT CCGAG TTCTTTTGAGTCGAT TERM 348 305251 - 305266 + T 70 -6.1 -4.22214 | opp_overlap 305251, overlap 305248 TTGTCATAATAAAAA CTCGG TTTAAT CCGAG TTCTTTTGAGTCGAT SMU.322c 306177 - 305257 - | glucose-1-phosphate uridylyltransferase gpsA 307198 - 306179 - | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase TERM 349 306708 - 306733 + g 86 -11.9 -2.79302 | opp_overlap 306704, overlap 306731 TTTTGAACGTATTTG GCGGCTTCTAA ATCT TTAGATGCCGC TGTAATCAGGGTAAT TERM 350 306918 - 306946 + g 86 -8.1 -4.63218 | opp_overlap 306922 306938, overlap 306924 306925 TGATCAAGAATTTGT GAAACTTGCTTGG CCA CCAAGCGTGTTAC TTTTGTTGGAACAAC TERM 351 306924 - 306940 + g 74 -8.7 -3.48686 | opp_overlap 306922 306938, overlap 306918 306925 AGAATTTGTGAAACT TGCTTGG CCA CCAAGCG TGTTACTTTTGTTGG TERM 352 306925 - 306939 + g 74 -10 -2.68127 | opp_overlap 306922 306938, overlap 306924 306918 GAATTTGTGAAACTT GCTTGG CCA CCAAGC GTGTTACTTTTGTTG dut 307519 - 307965 + | deoxyuridine 5'-triphosphate nucleotidohydrolase TERM 353 308217 - 308197 - gf 70 -8.3 -3.05224 | opp_overlap 308200, overlap 308196 AGAGTCTTTGAAAAG CGTCAAGCA TCT TGCTTTACG AACCAAAACTTAACA SMU.326 307975 - 308445 + | hypothetical protein TERM 354 308906 - 308935 + GF 75 -2.2 -5.37865 | gap 1, overlap 308910 TAATATGCAAAGTAT TCGTGCTGAGATT GAAAA AATC-CAGCCTGA TTTTTTAATTATTGA TERM 355 309248 - 309276 + GF 84 -5.3 -5.40072 | overlap 309249 AATGAGGTCGGGTGG TTTGGTTGAGGTT TTG AATCCCAGCCAAG TTTTTTTAGAAGAGC SMU.327 308403 - 309803 + | DNA repair protein RadA SMU.328 309887 - 310387 + | putative carbonic anhydrase TERM 356 310407 - 310427 + F 71 -7.7 -3.46647 | opp_overlap 310412, overlap 310405 CTAATTAATTTTTAA GTCAATTTA TAA TAAATTGGC TATTTCATGGATAAA TERM 357 310839 - 310864 + G 74 -7.6 -3.89756 | CGATGGTAAATTGGC CTTGGCCC CTTCTATGCC GGGCCAAG TTATTGCTTTAGAAT SMU.329 310576 - 311289 + | hypothetical protein TERM 358 312859 - 312843 - g 72 -9.5 -2.80028 | overlap 312842 ATGAAGATTTCAAAT CGGAAAA TAT TTTTCCG CAAATTAAAGCCGTT gltX 311576 - 313033 + | glutamyl-tRNA synthetase SMU.331 313149 - 313673 + | putative transcriptional regulator TERM 359 313797 - 313810 + G 73 -6.7 -4.28651 | AATCTGACATTATCA GCTGT TTTA ACAGC TTTTAGCATTTTAAT SMU.332 313740 - 314288 + | hypothetical protein TERM 360 314943 - 314956 + G 75 -4.5 -5.1356 | TCTTATTTTCTTAGT CAGCG GGCT TGCTG TTTTTGTTCGTCAGG SMU.333 314437 - 315672 + | hypothetical protein TERM 361 315729 - 315702 - f 93 -6.4 -5.66229 | opp_overlap 315702 AGTAATAATAAAAAA GCTATCTTTACT AACA AGTAAGAATAGC TTTTTTGATTTAAGA TERM 362 315702 - 315729 + F 88 -6.4 -5.37593 | opp_overlap 315702 AGTAATAATAAAAAA GCTATCTTTACT AACA AGTAAGAATAGC TTTTTTGATTTAAGA SMU.334 315869 - 317059 + | argininosuccinate synthase TERM 363 317320 - 317347 + F 100 -11.4 -3.9644 | opp_overlap 317320 317323, overlap 317323 TGAGAGGAGCTTAAA TAAGTCTGAGAC GAGG GTCCCAGACTTA TTGTTATATTAAGGA TERM 364 317347 - 317320 - f 100 -13.6 -3.63068 | opp_overlap 317320 317323, overlap 317323 TGAGAGGAGCTTAAA TAAGTCTGAGAC GAGG GTCCCAGACTTA TTGTTATATTAAGGA TERM 365 317323 - 317344 + F 82 -8.7 -4.10144 | opp_overlap 317320 317323, overlap 317320 GAGGAGCTTAAATAA GTCTGAGAC GAGG GTCCCAGAC TTATTGTTATATTAA TERM 366 317344 - 317323 - f 90 -10.9 -3.94634 | opp_overlap 317323 317320, overlap 317320 GAGGAGCTTAAATAA GTCTGAGAC GAGG GTCCCAGAC TTATTGTTATATTAA SMU.335 317402 - 318784 + | argininosuccinate lyase TERM 367 318803 - 318826 + F 75 -4.7 -5.10601 | opp_overlap 318796 318803 TAGCAAAATTGATAA GTCAAAAAT AATGAG ATTTTTGGC TTTTTCTCATTTTAT rnpA 318879 - 319238 + | ribonuclease P TERM 368 319345 - 319359 + G 83 -7.1 -4.88067 | TTTGTTTATTTCTTT GCGGA GACCA TCCGC TTTTTATCCATCAAT SMU.337 319222 - 320037 + | hypothetical protein TERM 369 320236 - 320222 - g 72 -7.8 -3.85043 | overlap 320220 GAATTAATGAAAAGA CAGCCC ATA AGGCTG ATCAAAAGGCAGTAC TERM 370 320451 - 320429 - g 79 -7.8 -4.30719 | overlap 320409 320442 TTTCTGCACAAGAAA TGTTAGAGCA AAA TGCTTTAACA ACTAAAACATCGGCA SMU.338 320050 - 321018 + | Jag family RNA-binding protein TERM 371 321227 - 321215 - g 70 -2.6 -5.0666 | CACCTAAAAAATAAA GGCG TTTAT CACC CCATGACTCATGCAG SMU.339 321128 - 321730 + | hypothetical protein rpmH 321953 - 322087 + | 50S ribosomal protein L34 SMU.341 322265 - 323164 + | putative deoxyribonuclease TERM 372 323293 - 323268 - f 80 -7.7 -4.25104 | GCCGCCGTAGCAAAA TCTTCTAACAA CTGT TTGTTAGAGGA CGAGGAAAACTTCAA SMU.342 323332 - 323967 + | hypothetical protein SMU.343 324244 - 324765 + | hypothetical protein TERM 373 325027 - 325044 + G 82 -8.5 -4.25848 | CGCCCAACTGGTGCA GATTGCT GCGG AGCAATC TTTTGATGACAGCTT SMU.344 324866 - 325123 + | hypothetical protein SMU.345c 325442 - 325128 - | hypothetical protein TERM 374 325753 - 325732 - g 75 -4.3 -5.09173 | GAAGATCTGAAAAAA CTGGCAGCC CTTC AGCCGCAAG TTGCAACTGCGTCAG SMU.346 325540 - 326157 + | putative NADH dehydrogenase; NAD(P)H nitroreductase SMU.348 326257 - 326703 + | putative histidine triad (HIT) hydrolase ksgA 326715 - 327590 + | dimethyladenosine transferase SMU.350 327600 - 328004 + | hypothetical protein TERM 375 328014 - 327996 - f 81 -3.8 -5.52384 | opp_overlap 327990 327996 GTCTTATCAAAAAAA TCTCGCTA AGT CAGTGAGA TTTTTCTTATTATTT TERM 376 327996 - 328014 + F 84 -5.3 -5.40014 | opp_overlap 327996, overlap 327990 GTCTTATCAAAAAAA TCTCGCT AAGTC AGTGAGA TTTTTCTTATTATTT TERM 377 328752 - 328737 - g 81 -5.4 -5.30155 | TCATGAACGAAAAAA CAGTCT AGTG AGACCG CCAATTGTCAATATT SMU.351 328549 - 329421 + | ribosome-associated GTPase SMU.352 329429 - 330088 + | ribulose-phosphate 3-epimerase SMU.353 330081 - 330713 + | hypothetical protein TERM 378 330901 - 330884 - g 71 -3.5 -5.06414 | GGTTGCTAATAAAAA TCAATTG CTTG CAATTAA TCAGCAGTTGACACG TERM 379 331519 - 331509 - g 89 -6.8 -5.47218 | CTTTATCGAAAAAAA CTGC TAA GCAG TATCAAGACTTTTGC TERM 380 331770 - 331754 - g 83 -3.7 -5.52909 | overlap 331756 GAATATTCAAAAAAA TGCTGAT GAT ATCAGTA AAATTTTAGGAAATG SMU.354 330720 - 331994 + | hypothetical protein SMU.355 331984 - 332952 + | putative CMP-binding factor TERM 381 332941 - 332968 + F 86 -4.2 -5.77571 | CAAAACACGAAAAAA GATGACTATTAG AGCT CTAATGTTCGTC TTTTTATTTTTTAAT purR 333020 - 333835 + | purine operon repressor TERM 382 334206 - 334194 - g 73 -2.7 -5.30686 | AATAGCCATAAAAAA GTTCA TAC TAAAC TTGCTGCACCTCAAA rpsL 334095 - 334508 + | 30S ribosomal protein S12 SMU.358 334526 - 334996 + | 30S ribosomal protein S7 TERM 383 335097 - 335117 + F 93 -9.7 -4.72272 | opp_overlap 335096 335097 AAACAAAACATAAAG CGGGTAGGT TAT GCCTATCCG TTTTTAATAACAAAG TERM 384 335414 - 335386 - g 74 -8.9 -3.46068 | TGCTCAATGGAAAGA CCATCGTGTCAAT ATT ATTGACACACCGG GGCACGTAGACTTTA SMU.359 335165 - 337246 + | elongation factor G TERM 385 337322 - 337369 + F 76 -3.6 -5.5112 | opp_overlap 337322 AATAGTGATTATTAA GAGAAAATAAGAAGTTTAAAGT AATA AATCTTGACTTCTTATTCTCTC TTTTTTCTTGCTAGA TERM 386 337498 - 337508 + F 79 -2.6 -5.79588 | opp_overlap 337478, overlap 337480 TAAAAGGCAATGCCT TTTA AAA TAAA TTTTTTTGATTTTCA gapC 337541 - 338554 + | glyceraldehyde-3-phosphate dehydrogenase TERM 387 338568 - 338596 + F 90 -12.5 -3.33261 | opp_overlap 338574, overlap 338574 AATACTCATTATTTT GTAAAAGGGGACC TTT GGTCCTCTTTTTC TTATAAAGGTTAAGA TERM 388 338590 - 338574 - f 77 -7.9 -4.10161 | opp_overlap 338568 338574 CATTATTTTGTAAAA GGGGACC TTT GGTCCTC TTTTTCTTATAAAGG TERM 389 338574 - 338590 + F 100 -10.1 -5.18726 | opp_overlap 338574, overlap 338568 CATTATTTTGTAAAA GGGGACC TTT GGTCCTC TTTTTCTTATAAAGG pgk 338960 - 340156 + | phosphoglycerate kinase TERM 390 340223 - 340238 + F 93 -9 -4.84359 | opp_overlap 340222 340216 TAATGATAGCAAAGG GGTGGA TTTG TCCACC TTTTTGTGAGAATGA TERM 391 340271 - 340288 + F 74 -6.3 -4.4767 | opp_overlap 340271 ATATTGTGATGAAAA GAGTTGT GAAC GCAACTC TTTTCTAGTGCATAC SMU.362 340543 - 341061 + | hypothetical protein TERM 392 341204 - 341234 + G 70 -8.4 -3.28712 | opp_overlap 341203 341204 341207, overlap 341207 GAACTGTAATGAAAT TGACGGATTTAACG GCT CGTCAAATTCGTTA TTATGAAGACCAAGG TERM 393 341207 - 341231 + G 72 -7.9 -3.78934 | opp_overlap 341204 341203 341207, overlap 341204 CTGTAATGAAATTGA CGGATTTAACG GCT CGTCAAATTCG TTATTATGAAGACCA glnR 341143 - 341514 + | transcriptional regulator; glutamine synthetase repressor glnA 341554 - 342900 + | glutamine synthetase type 1; glutamate--ammonia ligase TERM 394 342911 - 342927 + F 90 -5.8 -5.53991 | opp_overlap 342911 ATTAAGGTTAGAAAA CAGCCG ATAGC TGGCTG TTTTTTTAATCAATC gltA 343060 - 347577 + | glutamate synthase (large subunit) TERM 395 348113 - 348127 + G 74 -8.6 -3.62859 | CTTAACCAGTTGGGT CACAGT GTA ACTGTG TTTGAGCGTTCTGAT gltD 347579 - 349015 + | glutamate synthase subunit beta TERM 396 349197 - 349220 + G 86 -11 -4.17762 | AAAAAGCTGTGTTTA CTGTTGCGGC TACG GCAGCAACAG TTGTTTTAGGAAATA TERM 397 349253 - 349239 - g 73 -4.2 -4.93877 | opp_overlap 349239 TTTTAGGAAATAAAA TGGCTG ATG CAGACA CTTATACTCTTCAAG SMU.367 349163 - 349798 + | hypothetical protein TERM 398 349839 - 349860 + T 100 -9.5 -5.79595 | TTTTATCAGATTGAC GACAAGCTT TTTG AGGCTTGTC TTTTTTGTTTTAGAC TERM 399 349907 - 349886 - T 100 -10.9 -5.58522 | TAGACAAAATAAAAA GCCAATGTC TGTA GACACTGGC TAAGGATGGGGCAAA SMU.368c 351666 - 349984 - | hypothetical protein SMU.369c 351898 - 351668 - | hypothetical protein TERM 400 351971 - 351944 - H 72 -2.8 -5.42265 | overlap 351947 CCAAACTACAAAAAA TCAGTCAAATAT AACT ACATTTGACAAA AATTTATGAAATTTT TERM 401 352266 - 352305 + H 100 -10.2 -5.89659 | opp_overlap 352280, overlap 352270 TATCTATAAATTTTC TATAGTGACATTAATGTC GTCT GACATTGATGTCACTTTC TTTTTGTTTTTTTAT TERM 402 352270 - 352301 + H 100 -15.4 -5.21459 | opp_overlap 352280, overlap 352266 TATAAATTTTCTATA GTGACATTAATGTC GTCT GACATTGATGTCAC TTTCTTTTTGTTTTT TERM 403 352898 - 352912 + G 76 -5.6 -4.87665 | opp_overlap 352897 352898 352899, overlap 352899 TTTTAGAACTAAAAG CGGCAG GGA CTGCCA TTTTTCTAACTACCC TERM 404 352899 - 352911 + G 74 -9.1 -3.52117 | opp_overlap 352899 352898 352897, overlap 352898 TTTAGAACTAAAAGC GGCAG GGA CTGCC ATTTTTCTAACTACC SMU.370 352360 - 353205 + | putative ABC transporter, ATP-binding protein SMU.371 353198 - 353911 + | hypothetical protein SMU.372 353956 - 355119 + | hypothetical protein TERM 405 355507 - 355524 + G 74 -4.9 -5.00884 | AGTTTCGCTTTTCAG TCATGGA GATT TCTATGA TTTTTTGAAAAAGAT SMU.373 355112 - 355855 + | hypothetical protein SMU.374 355842 - 356552 + | putative oxidoreductase SMU.375 356563 - 357471 + | hypothetical protein TERM 406 358168 - 358158 - g 76 -4 -5.28778 | opp_overlap 358158 ACTACTGAGAAAAAA TCAA GTT TTGA TTGTCTTTGATGAGG SMU.376 357487 - 358725 + | putative aminotransferase TERM 407 358713 - 358703 - f 77 -4 -5.42259 | opp_overlap 358703 TGATTTCTAAAAAAA TTGA AAG TCAA AATTCTTTTTAAGCT SMU.378 358920 - 359159 + | hypothetical protein SMU.379 359137 - 359274 + | hypothetical protein TERM 408 359299 - 359324 + T 87 -5.5 -5.59962 | ATTCTTTAAGATGGA GACAAATTTCT TTTT GGAGGTTTGTC TTTTTGTTTATTTTA TERM 409 359393 - 359444 + T 71 -8.8 -2.83233 | opp_overlap 359393, overlap 359390 AATCAAAAAAGAAAA GCCCTGTAATACCCTTAGCAGGTA AATA TACCTACTATAGATATTACAGAGC TAGTTGCTATAATTA TERM 410 359444 - 359393 - T 100 -17.6 -5.47846 | opp_overlap 359393 359390 AATCAAAAAAGAAAA GCCCTGTAATACCCTTAGCAGGTA AATA TACCTACTATAGATATTACAGAGC TAGTTGCTATAATTA SMU.381c 360683 - 359781 - | hypothetical protein TERM 411 360102 - 360113 + g 71 -4.4 -4.72272 | overlap 360098 GTCTACTGTTAGCTC TTGC TTGA GCAA TTTTTGCTCAAGCAA SMU.382c 361912 - 361058 - | putative oxidoreductase TERM 412 361265 - 361281 + g 91 -7.3 -5.42259 | opp_overlap 361265 CAGTTTTTGCAGAAG CTCAATC AAG GGTTGAG TTTTTTTAAGACTGC TERM 413 361574 - 361588 + g 83 -6.4 -5.08088 | GTTGCTGACCCCAAT GGCTTT TAT AAGGCC TTTTTCTTGCAAGTT SMU.383c 363093 - 362047 - | putative reductase TERM 414 362295 - 362306 + g 70 -5.8 -4.20367 | TATGACGTTTTGGAG CAGG AATG CCTG TTATTTCTTCCAAGG TERM 415 363128 - 363180 + H 88 -6.8 -5.16572 | gap 1, opp_overlap 363134 363135 363146, overlap 363136 363146 TGGCGAGTTAATTAA TAAAAGTTTAATCAAAAATAGATGA CATG TCATCTATTTTTGATTAT-TTTATA TTTTTTAACTTAAAT TERM 416 363175 - 363134 - H 85 -10.5 -3.4642 | opp_overlap 363128 363136 363146, overlap 363135 363146 GTTAATTAATAAAAG TTTAATCAAAAATAGATGA CATG TCATCTATTTTTGATTATT TTATATTTTTTAACT TERM 417 363174 - 363135 - H 100 -14 -2.67129 | opp_overlap 363128 363136 363146, overlap 363134 363146 TTAATTAATAAAAGT TTAATCAAAAATAGATGA CATG TCATCTATTTTTGATTAT TTTATATTTTTTAAC TERM 418 363136 - 363173 + H 100 -17.5 -5.06052 | opp_overlap 363135 363134 363146, overlap 363128 363146 TAATTAATAAAAGTT TAATCAAAAATAGATGA CATG TCATCTATTTTTGATTA TTTTATATTTTTTAA TERM 419 363163 - 363146 - H 86 -7.1 -4.87893 | opp_overlap 363136 363128 363146, overlap 363135 363134 AAGTTTAATCAAAAA TAGATGA CATG TCATCTA TTTTTGATTATTTTA TERM 420 363146 - 363163 + H 88 -7.1 -5.07971 | opp_overlap 363146 363135 363134, overlap 363136 363128 AAGTTTAATCAAAAA TAGATGA CATG TCATCTA TTTTTGATTATTTTA TERM 421 363372 - 363387 + G 70 -7.6 -3.65991 | opp_overlap 363364 GGAATAACTCCTAAT CAAGGA GAAG TCCTTG TTATATTAGGAAGCT TERM 422 363529 - 363540 + G 72 -5.8 -4.41348 | CGACCAGTGACGGGC GCAG CTTC CTGC TTTCTTTAACGGCAG SMU.384 363267 - 363725 + | hypothetical protein TERM 423 363946 - 363978 + G 70 -8.4 -3.24017 | gap 1, opp_overlap 363946 CCGGGATCCTACACA GGTCTACGC-GTGGC TGTA GCGACAGCGAAGACC TTGGCTTATACGCTT SMU.385 363736 - 364422 + | putative glycoprotein endopeptidase TERM 424 364807 - 364790 - g 76 -7.1 -4.35483 | TCTTACTACAAGAAA GGATTAT TATC ATAATCC TAAAGAAGATGCCAT SMU.386 364422 - 364856 + | putative ribosomal-protein-alanine acetyltransferase TERM 425 365570 - 365558 - g 72 -4.8 -4.84017 | AATGCCCGACAAAAA GGAG AGCAA CTCC GCTTAGAAGATTTAT TERM 426 365846 - 365862 + G 73 -7.3 -4.11484 | opp_overlap 365846 GAACTCGATCTAAAT GCTAAAC CCA GTTTGGC TTTTGAAGGATTAGA SMU.387 364871 - 365881 + | O-sialoglycoprotein endopeptidase SMU.388 365960 - 366658 + | putative integral membrane protein; branched-chain amino acid permease SMU.389 366648 - 366971 + | hypothetical protein SMU.390 366854 - 367012 + | hypothetical protein TERM 427 367056 - 367080 + T 72 -3.5 -5.16237 | opp_overlap 367057, overlap 367057 AAAAAAATCAAAAAA AGCAAGAACAT TTA GTGTCCTTGCC TTTTTTGATGGCGTT TERM 428 367079 - 367057 - T 100 -8.5 -5.88061 | opp_overlap 367057 367056 AAAAAATCAAAAAAA GCAAGAACA TTTAG TGTCCTTGC CTTTTTTGATGGCGT SMU.391c 367558 - 367067 - | hypothetical protein TERM 429 367153 - 367165 + g 78 -3.4 -5.41143 | GTTTTTCTTTACTTT GAGA TTTTT TCTC TTTTTTTAAAGCCTC SMU.392c 368828 - 367656 - | hypothetical protein TERM 430 368166 - 368147 - G 70 -5 -4.66264 | opp_overlap 368145 368147 368148 368150, overlap 368137 368148 CAAAATGCGTAAAAA GCAGATCA TGAT TGATCTGA TGTTTACCACATGTC TERM 431 368165 - 368148 - G 71 -8.5 -3.38674 | opp_overlap 368147 368145 368148 368150, overlap 368147 368137 AAAATGCGTAAAAAG CAGATCA TGAT TGATCTG ATGTTTACCACATGT SMU.393 368963 - 369478 + | hypothetical protein TERM 432 369551 - 369581 + T 87 -5.5 -5.55769 | gap 1, opp_overlap 369546 369551 TTTTTAAAAAGAAAA CTGGCTCATTCTCT TTGA GGAGAATT-GCCAG TTTTTTGTTGTAAGG TERM 433 369581 - 369551 - T 79 -4.8 -5.26119 | gap 1, opp_overlap 369551, overlap 369546 TTTTTAAAAAGAAAA CTGGCTCATTCTC TTTGAG GAGAATT-GCCAG TTTTTTGTTGTAAGG SMU.394c 369897 - 369598 - | hypothetical protein TERM 434 369847 - 369858 + g 71 -4.4 -4.7153 | overlap 369854 CTGCTTTTTTTCCAT TTGC TTTT GCAA TTTTTGCGCTTGTTT TERM 435 370119 - 370137 + r 95 -10.4 -4.68424 | opp_overlap 370121 AAGCTTTCTTTCTAA GAGCAAAA ATT TTTTGCTC TTTTTACATGCGTTG pepX 372432 - 370156 - | x-prolyl-dipeptidyl aminopeptidase TERM 436 371989 - 371975 - G 76 -7.2 -4.25256 | TTGCCATTAAAATAA CGATAA TGG TTATCG GCTGGCAAAAAGCCT glpF 372547 - 373416 + | putative glycerol uptake facilitator protein TERM 437 373460 - 373430 - f 100 -12.8 -3.28684 | opp_overlap 373430 373436, overlap 373436 AATCATTTAGATTAA CAAAAAGCTGAG TTGTTTG CTCAGCTTTTTG TTTTTTTACTTTCGT TERM 438 373430 - 373460 + F 100 -13.5 -5.73563 | opp_overlap 373430 373436, overlap 373436 AATCATTTAGATTAA CAAAAAGCTGAGT TGTTT GCTCAGCTTTTTG TTTTTTTACTTTCGT TERM 439 373454 - 373436 - f 83 -6 -5.16841 | opp_overlap 373430 373436, overlap 373430 TTAGATTAACAAAAA GCTGAG TTGTTTG CTCAGC TTTTTGTTTTTTTAC TERM 440 373436 - 373454 + F 100 -6.7 -5.86609 | opp_overlap 373436 373430, overlap 373430 TTAGATTAACAAAAA GCTGAGT TGTTT GCTCAGC TTTTTGTTTTTTTAC SMU.399 373588 - 374346 + | hypothetical protein SMU.400 374343 - 375293 + | putative secreted esterase SMU.401c 375867 - 375427 - | hypothetical protein TERM 441 375982 - 376005 + r 100 -11.8 -4.14243 | opp_overlap 375982 CCGAAAGCAAATAAA GACCTCACTT TTAT GAGTGAGGTC TTTTAAACTAAACTG TERM 442 376005 - 375982 - R 100 -11.1 -4.62772 | opp_overlap 375982 CCGAAAGCAAATAAA GACCTCACT TTTATG AGTGAGGTC TTTTAAACTAAACTG pfl 378356 - 376029 - | pyruvate formate-lyase TERM 443 378306 - 378317 + g 74 -5.8 -4.57073 | opp_overlap 378306 GTCAGTTCCTTTAAA GCCT TCCC AGGC TTTTTCAAAAACGTC TERM 444 378823 - 378801 - g 87 -10.6 -4.20148 | opp_overlap 378790 378799 378801 ATGAGTTCAAAAGAA GCTTACGAAC GTT GTCCGCAAGC TATTTTTATCAGAGG SMU.403 378579 - 379691 + | DNA polymerase IV SMU.404c 380020 - 379697 - | hypothetical protein SMU.405c 380440 - 380033 - | putative transcriptional regulator TERM 445 380520 - 380545 + r 79 -3.3 -5.60689 | opp_overlap 380521, overlap 380521 ATAATGGTCAAAAAA AGCTTGTCAAA ATAT TTTGACAAACC TTTTTTATTCTATAG TERM 446 380544 - 380521 - R 100 -9 -5.43866 | opp_overlap 380521 380520 TAATGGTCAAAAAAA GCTTGTCAAA ATAT TTTGACAAAC CTTTTTTATTCTATA SMU.406c 381367 - 380555 - | hypothetical protein SMU.407 381676 - 382275 + | hypothetical protein TERM 447 382363 - 382353 - g 71 -4 -4.86621 | ATTTTTAATGAAAAA GTTT TTT AAAC TAAAAGAGAACAAAA SMU.408 382345 - 383775 + | putative permease TERM 448 383825 - 383798 - f 100 -14.3 -2.88544 | opp_overlap 383798, overlap 383800 TTTTATTTGCATATA TAGGAGCTCAG ATAAGG CTGAGCTCCTA TTTTTACTGTCCAAA TERM 449 383798 - 383825 + F 100 -14.3 -4.8048 | opp_overlap 383798 383800 TTTTATTTGCATATA TAGGAGCTCAG ATAAGG CTGAGCTCCTA TTTTTACTGTCCAAA TERM 450 383823 - 383800 - f 90 -12.5 -2.99471 | opp_overlap 383798, overlap 383798 TTATTTGCATATATA GGAGCTCAG ATAAGG CTGAGCTCC TATTTTTACTGTCCA SMU.409 383904 - 384347 + | hypothetical protein brpA 384678 - 385898 + | putative transcriptional regulator TERM 451 385909 - 385952 + T 100 -15.6 -2.50994 | opp_overlap 385909, overlap 385912 385919 ATTAAAAATAAAAAA TAAGGTGGAAGGGTATGGTT TTTC AGTTATACCCTTTCACCTTA CTTCATAAAGTTGAG TERM 452 385952 - 385909 - T 100 -8.4 -5.95286 | opp_overlap 385909 385912 385919 ATTAAAAATAAAAAA TAAGGTGGAAGGGTAT GGTTTTTCAGTT ATACCCTTTCACCTTA CTTCATAAAGTTGAG TERM 453 385912 - 385949 + T 100 -12.9 -3.40639 | opp_overlap 385909, overlap 385909 385919 AAAAATAAAAAATAA GGTGGAAGGGTATGGTT TTTC AGTTATACCCTTTCACC TTACTTCATAAAGTT SMU.411c 386361 - 386068 - | hypothetical protein SMU.412c 386777 - 386358 - | putative Hit-like protein involved in cell-cycle regulation SMU.413 386842 - 387567 + | putative ABC transporter, ATP-binding protein SMU.414 387570 - 388604 + | putative ABC transporter, permease protein TERM 454 388795 - 388819 + G 100 -12.9 -4.36914 | opp_overlap 388800 ATCTTAGCTGCCTTA GCTAAGGAGCA GAT TGCTCCTCAGC TTTTATGGGCAAAAC TERM 455 388814 - 388800 - g 76 -10 -3.05463 | opp_overlap 388795 AGCTGCCTTAGCTAA GGAGCA GAT TGCTCC TCAGCTTTTATGGGC SMU.415 388663 - 389445 + | hypothetical protein TERM 456 389840 - 389824 - g 79 -5.8 -5.00616 | CCTTGGCCTAAAAAA CGGCAT GAAAA ACGCCG CTTGACTTATAAAAG trmB 389455 - 390090 + | tRNA (guanine-N(7))-methyltransferase TERM 457 390369 - 390323 - f 82 -7.5 -4.60292 | gap 1, opp_overlap 390334 390349, overlap 390326 390334 TATAATAAGAAGAAA TAATACAGA-AAGGAGCGAAGT TGTG ACTTCGCTCCTTATGTGTGTAA GGAGGGAAATACTAT TERM 458 390366 - 390326 - f 89 -9.2 -4.37348 | gap 1, opp_overlap 390334 390349, overlap 390323 390334 AATAAGAAGAAATAA TACAGA-AAGGAGCGAAGT TGTG ACTTCGCTCCTTATGTGTG TAAGGAGGGAAATAC TERM 459 390357 - 390334 - f 100 -15.4 -4.30477 | opp_overlap 390334 390349, overlap 390326 390323 GAAATAATACAGAAA GGAGCGAAGT TGTG ACTTCGCTCC TTATGTGTGTAAGGA TERM 460 390334 - 390357 + F 100 -15.4 -3.64198 | opp_overlap 390334 390326 390323, overlap 390349 GAAATAATACAGAAA GGAGCGAAGT TGTG ACTTCGCTCC TTATGTGTGTAAGGA SMU.417 390362 - 390853 + | hypothetical protein nusA 390889 - 392082 + | transcription elongation factor NusA SMU.419 392100 - 392396 + | hypothetical protein SMU.420 392389 - 392691 + | hypothetical protein TERM 461 392755 - 392737 - g 74 -7.5 -3.89334 | AAAGATTATACGAAA TTGCCAA GGAAA TTGGCAA AGAAAGTAAAGAAAT TERM 462 393535 - 393516 - g 72 -7.2 -4.03234 | GCTCGCCCAGATAAA TCACGTGA TTTT TCACATGA GAATGAAGACGGACC infB 392712 - 395462 + | translation initiation factor IF-2 TERM 463 395598 - 395579 - f 82 -7.8 -4.66814 | opp_overlap 395579 AAGATAAACAATAAA GCTAGGTC ATCT GGCCTAGC TTTTTTCAGAAGATG TERM 464 395579 - 395598 + F 100 -10 -5.0133 | opp_overlap 395579 AAGATAAACAATAAA GCTAGGTC ATCT GGCCTAGC TTTTTTCAGAAGATG rbfA 395696 - 396046 + | ribosome-binding factor A TERM 465 396111 - 396142 + F 100 -13.2 -4.65895 | gap 1 GAAAATAGGTGTCAA GCCTTCGTTAGGATT ATA AGTCC-AACGAAGGC TTTTTCCATCAACCA TERM 466 396264 - 396290 + F 73 -4.4 -5.11033 | opp_overlap 396271, overlap 396265 TATTTCCATCTCCAT CTCAGAAGGCCT CCC AAGCCTTTTGAC TTTTTTGAGCTTGTC TERM 467 396265 - 396289 + F 73 -7.9 -3.65535 | opp_overlap 396271, overlap 396264 ATTTCCATCTCCATC TCAGAAGGCCT CCC AAGCCTTTTGA CTTTTTTGAGCTTGT TERM 468 396729 - 396751 + G 76 -4.8 -5.07486 | overlap 396697 396732 TTAGGAGGCTGGTCT GGAGCAGC TGTAGGT GCTGCTAC TTTTTGTTGAACATG SMU.423 396531 - 396761 + | hypothetical protein TERM 469 396996 - 397022 + F 83 -4.5 -5.69023 | gap 1, opp_overlap 396996 CATTGTTTGAGTGAA GAGGC-AGAAAC TAAG GTTTATCGCCTC TTTTTTTGCTCTTTT copY 397152 - 397595 + | negative transcriptional regulator, CopY copA 397592 - 399820 + | copper-transporting ATPase; P-type ATPase copZ 399833 - 400036 + | putative copper chaperone TERM 470 400118 - 400129 + F 100 -5.8 -6.00086 | opp_overlap 400116 400118, overlap 400109 CAAAGAGGGAAAAGA CTGG GAAA CCAG TTTTTTTTCTGCTGT SMU.428 400277 - 401104 + | hypothetical protein SMU.429c 401702 - 401211 - | hypothetical protein SMU.431 402054 - 402923 + | putative ABC transporter, ATP-binding protein SMU.432 402924 - 403781 + | putative ABC transporter, integral membrane protein TERM 471 404146 - 404156 + G 72 -5.4 -4.56775 | GACCATCTGGAATCT CTGT CAG ACAG TTTTTCGGGGAACAT SMU.433 403795 - 404253 + | putative transcriptional regulator SMU.434 404267 - 404665 + | hypothetical protein TERM 472 404657 - 404674 + F 95 -5.6 -5.95946 | opp_overlap 404657, overlap 404650 GAGCGCCATAAAAAA CAAGAG TAATTT CTCTTG TTTTTTTATTGTTGA TERM 473 404674 - 404657 - f 80 -5.6 -5.252 | opp_overlap 404657 404650 GAGCGCCATAAAAAA CAAGAG TAATTT CTCTTG TTTTTTTATTGTTGA TERM 474 405267 - 405279 + G 71 -4.1 -5.00616 | GAGAATTGCTCTCGG CTGGT GTG ACTAG TTTTTTACCAACAGG SMU.435 404987 - 406165 + | putative N-acetylglucosamine-6-phosphate deacetylase TERM 475 406259 - 406291 + T 95 -10.7 -4.69549 | opp_overlap 406259 AAAAATTTAAGTAAA GGATTTCGTTCTGTA CTG TACAGGACTAAGTCC TTTTAGTTTTACCTT SMU.436c 407086 - 406250 - | putative transposase, ISSmu1 TERM 476 407091 - 407103 + r 79 -4.8 -5.31855 | TCCGTTACCAATCCT CGGA CAATT TCCG TTTTTCTTCTTGCTC TERM 477 407605 - 407651 + r 70 -7.4 -3.6053 | opp_overlap 407608, overlap 407602 407606 TCAATTTCATAATAA AAACACCCCAAAAGTTAGAT TTTTTCT GTCTAACTTTTGGGGTGCAG TTCATTTGTGAACGA TERM 478 407606 - 407650 + r 82 -10.9 -2.75997 | opp_overlap 407608, overlap 407605 407602 CAATTTCATAATAAA AACACCCCAAAAGTTAGAT TTTTTCT GTCTAACTTTTGGGGTGCA GTTCATTTGTGAACG TERM 479 407648 - 407608 - R 100 -17.2 -5.19328 | opp_overlap 407606 407605 407602 ATTTCATAATAAAAA CACCCCAAAAGTTAGA TTTTTTCTG TCTAACTTTTGGGGTG CAGTTCATTTGTGAA SMU.438c 412040 - 407739 - | putative (R)-2-hydroxyglutaryl-CoA dehydratase activator-related protein TERM 480 409902 - 409913 + g 73 -3 -5.28826 | overlap 409904 AATGGTTTCGATTCC CTTT TGAT AAAG TTTTTTATCAGATTT SMU.439 412321 - 412932 + | putative transcriptional regulator SMU.440 413049 - 413465 + | hypothetical protein SMU.441 413462 - 413920 + | putative transcriptional regulator SMU.442 413913 - 414323 + | hypothetical protein TERM 481 414500 - 414556 + F 85 -8 -4.61873 | gap 1, overlap 414503 TAATAAATTAGGGTG GAACCGCGTTTCAAACGCCCCTATGTC AGTT GGCATGGGAGTGATTGA-GCGTGGCTC TTTTGATTTCTCAGC SMU.444 414522 - 414629 + | hypothetical protein TERM 482 414899 - 414873 - g 71 -3.6 -4.94972 | opp_overlap 414874, overlap 414874 TATGATAATGAAAAA GGTGCAGGTACC ATG AGTCCCTACACT TTCTTACGTGCTATT glyQ 414774 - 415691 + | glycyl-tRNA synthetase subunit alpha glyS 415694 - 417733 + | glycyl-tRNA synthetase subunit beta SMU.447 417839 - 418093 + | hypothetical protein SMU.448 418217 - 418597 + | hypothetical protein TERM 483 418617 - 418649 + F 100 -14.3 -3.36131 | opp_overlap 418617 418622, overlap 418622 TCATTTTGACACTAA TAAAAGGGGCGGAAC AAT GTTTCGGCCCTTTTA TTGTGCAGTAGTTTT TERM 484 418649 - 418617 - f 89 -12.1 -3.26471 | opp_overlap 418617 418622, overlap 418622 TCATTTTGACACTAA TAAAAGGGGCGGAAC AAT GTTTCGGCCCTTTTA TTGTGCAGTAGTTTT TERM 485 418622 - 418644 + F 100 -9.8 -4.78237 | opp_overlap 418617 418622, overlap 418617 TTGACACTAATAAAA GGGGCGGAAC AAT GTTTCGGCCC TTTTATTGTGCAGTA TERM 486 418644 - 418622 - f 87 -7.6 -4.75472 | opp_overlap 418622 418617, overlap 418617 TTGACACTAATAAAA GGGGCGGAAC AAT GTTTCGGCCC TTTTATTGTGCAGTA TERM 487 418745 - 418719 - f 100 -11.8 -4.42386 | opp_overlap 418719 TTTTTAGGTACAAAA TTTTAACAGTCC AGC GGACTATTAAAA TCTCTCTTGCCAAGT TERM 488 418719 - 418745 + F 76 -9.6 -3.09452 | opp_overlap 418719 TTTTTAGGTACAAAA TTTTAACAGTCC AGC GGACTATTAAAA TCTCTCTTGCCAAGT TERM 489 418765 - 418793 + F 80 -9.7 -3.54653 | opp_overlap 418763 TCTTGCCAAGTGATA GCTCTAACGGTTT TCT AAACTGTTAAAGC TTATCTAATCCCCAT proB 419086 - 419895 + | gamma-glutamyl kinase proA 419899 - 421149 + | gamma-glutamyl phosphate reductase SMU.451 421261 - 421365 + | hypothetical protein mraW 421452 - 422402 + | S-adenosyl-methyltransferase MraW TERM 490 422469 - 422491 + G 74 -4.8 -4.91511 | opp_overlap 422470, overlap 422470 CAAAAAAGAATCAAA ACCTTTACCA GAT TGGAAAAGGC TTTTTATGGTGCGAT TERM 491 422470 - 422490 + G 71 -8.3 -3.54183 | opp_overlap 422470, overlap 422469 AAAAAAGAATCAAAA CCTTTACCA GAT TGGAAAAGG CTTTTTATGGTGCGA TERM 492 422490 - 422470 - g 87 -8.3 -4.72772 | opp_overlap 422470 422469 AAAAAAGAATCAAAA CCTTTACCA GAT TGGAAAAGG CTTTTTATGGTGCGA ftsL 422412 - 422735 + | putative cell division protein TERM 493 423489 - 423464 - g 78 -3.3 -5.36364 | gap 1 CCAAAAAGATAAAAA TGGAAACACACT TCT AG-GTGCTGCCA CAACTGTAAAAAAAG TERM 494 424002 - 424021 + G 71 -6.4 -4.13767 | opp_overlap 424001 424002 TATCTCAATAAATAT CGTTTTGG CTTA CCAACACG TTTTGGAATGGGCAG pbp2x 422739 - 424988 + | putative penicillin-binding protein 2X TERM 495 425629 - 425640 + G 75 -2.2 -5.43414 | ATTTCCATGGTTGGT GCTT TACT AGGC TTTTTTGTCTATAAT mraY 424990 - 426009 + | phospho-N-acetylmuramoyl-pentapeptide-transferase TERM 496 426198 - 426234 + G 85 -5.1 -5.64873 | CATAATGATTTGCGA CACTCTGAAAGACTGCT ATC AACTAACTTTCAGAGTG TTTTTTGTTGTTCGA SMU.457 426103 - 426270 + | hypothetical protein TERM 497 427675 - 427659 - g 71 -3.6 -4.90917 | opp_overlap 427659, overlap 427672 AAAGTTAATGAAAAA CGTCGT AAAGA ACGCCG TTTTGTTAAACGTGC SMU.458 426390 - 427733 + | putative ATP-dependent RNA helicase TERM 498 427750 - 427768 + F 74 -5.3 -4.81249 | opp_overlap 427750 ATATAGAGAGAAAAG TTGGGAT TAAGT GTCCCAA TTTTTAAATTTCGAA SMU.459 427974 - 428795 + | putative ABC transporter, amino acid binding protein SMU.460 428818 - 429621 + | putative amino acid ABC transporter, permease TERM 499 430217 - 430248 + G 74 -8.8 -3.6761 | overlap 430214 430220 GGTTAGTCATGATAT GAGCTTTGTTCGTC AGGT GGCGGATAAAGTTC TATTTCTTGAAAAGG TERM 500 430220 - 430245 + G 72 -6.9 -3.96841 | overlap 430217 430214 TAGTCATGATATGAG CTTTGTTCGTC AGGT GGCGGATAAAG TTCTATTTCTTGAAA SMU.461 429621 - 430364 + | putative amino acid ABC transporter, ATP-binding protein TERM 501 430376 - 430392 + F 74 -3 -5.40464 | opp_overlap 430370, overlap 430370 430378 TTGATATAATAAGAA TGCTCT TAATC AGAGTA TTTTTATTTATGGTG TERM 502 430459 - 430470 + G 70 -5.8 -4.34008 | AAGGTCTTCTTATGT CTGC TTTG GCAG TTATTTTAGTTAGTG SMU.462 430413 - 430637 + | hypothetical protein trxB 430700 - 431614 + | putative thioredoxin reductase (NADPH) SMU.464 432078 - 433538 + | nicotinate phosphoribosyltransferase nadE 433535 - 434359 + | NAD synthetase TERM 503 434397 - 434361 - f 100 -16.2 -3.90291 | gap 1, opp_overlap 434361 434365, overlap 434366 ATTTTTGGAAGTAAA TTGAA-GAGTTTGGGAC AAAA GTCCCAAACTCCTTCAA TCTGTGCAACATCAA TERM 504 434361 - 434397 + F 100 -16.2 -2.87931 | gap 1, opp_overlap 434361 434366, overlap 434365 ATTTTTGGAAGTAAA TTGAA-GAGTTTGGGAC AAAA GTCCCAAACTCCTTCAA TCTGTGCAACATCAA TERM 505 434365 - 434392 + F 100 -12.8 -3.15999 | opp_overlap 434361 434366, overlap 434361 TTGGAAGTAAATTGA AGAGTTTGGGAC AAAA GTCCCAAACTCC TTCAATCTGTGCAAC TERM 506 434391 - 434366 - f 100 -16.3 -3.33399 | opp_overlap 434365 434361, overlap 434361 TGGAAGTAAATTGAA GAGTTTGGGAC AAAA GTCCCAAACTC CTTCAATCTGTGCAA pepC 434472 - 435806 + | cysteine aminopeptidase C TERM 507 435872 - 435917 + T 90 -10.1 -4.11304 | gap 1, opp_overlap 435881, overlap 435874 435881 ATATACTTAGATTGG ATA-TTTAAAGGCACACTCT AATACCA AGAGTGTGCCTTTAAAATAA TTATTTATGGATTAG TERM 508 435874 - 435914 + T 100 -14.3 -3.07537 | opp_overlap 435881, overlap 435872 435881 ATACTTAGATTGGAT ATTTAAAGGCACACTCT AATACCA AGAGTGTGCCTTTAAAA TAATTATTTATGGAT TERM 509 435881 - 435907 + T 95 -12.4 -3.6501 | opp_overlap 435881, overlap 435874 435872 GATTGGATATTTAAA GGCACACTCT AATACCA AGAGTGTGCC TTTAAAATAATTATT TERM 510 435907 - 435881 - T 95 -12.4 -3.71378 | opp_overlap 435881 435874 435872 GATTGGATATTTAAA GGCACACTCT AATACCA AGAGTGTGCC TTTAAAATAATTATT pbp1a 438045 - 435922 - | penicillin-binding protein 1a; membrane carboxypeptidase TERM 511 436611 - 436598 - G 71 -3.7 -4.93296 | CCACCATTAGAAAAA GCAGC ATAA GCGGC GGCCATTTTTTCACT recU 438739 - 438146 - | Holliday junction-specific endonuclease SMU.470 438819 - 439340 + | hypothetical protein SMU.471 439446 - 439784 + | hypothetical protein TERM 512 440194 - 440209 + F 95 -9 -4.95302 | TTGCATAATAGGTGA GCTAGC TTTG GCTAGC TTTTATTGTCTTTAG SMU.472 440234 - 441388 + | N6-adenine-specific DNA methylase SMU.473 441479 - 443044 + | hypothetical protein luxS 443687 - 443205 - | S-ribosylhomocysteinase SMU.475 443832 - 445439 + | hypothetical protein TERM 513 445449 - 445472 + F 90 -8.2 -4.78237 | gap 1, opp_overlap 445448 AAATGAGAAGAGCAG GGGTAGGAACA AAA TGTTCC-GCCC TTTTATTGTGCAGTG gmk 445886 - 446518 + | guanylate kinase TERM 514 446700 - 446681 - g 74 -9.4 -3.19668 | CATCAGTTAAGCCAA CTCTTCAA GCAC TTGAAGAG ATTGAAGCAGGTAAT rpoZ 446542 - 446859 + | DNA-directed RNA polymerase subunit omega TERM 515 446847 - 446886 + F 100 -15.4 -3.06162 | opp_overlap 446846 446855, overlap 446855 GAAGGAAGAAGAAGG TGAGAAAATCTAAGGTTG GCAT CAATCTTAGATTTTTTCA TATTGAGGTAAGCTA TERM 516 446855 - 446878 + F 95 -9 -5.27779 | opp_overlap 446846 446855, overlap 446847 AAGAAGGTGAGAAAA TCTAAGGTTG GCAT CAATCTTAGA TTTTTTCATATTGAG TERM 517 446878 - 446855 - f 78 -6.8 -4.44461 | opp_overlap 446855 446847, overlap 446846 AAGAAGGTGAGAAAA TCTAAGGTTG GCAT CAATCTTAGA TTTTTTCATATTGAG priA 446901 - 449285 + | primosome assembly protein PriA TERM 518 449926 - 449910 - g 71 -6.5 -4.07687 | overlap 449911 ATCTGTCTGGTAAAA TTGAGCC ACA GGCTCAG GATGATAGTCAAGCA TERM 519 449925 - 449911 - g 75 -10 -3.04398 | overlap 449910 TCTGTCTGGTAAAAT TGAGCC ACA GGCTCA GGATGATAGTCAAGC fmt 449333 - 450280 + | methionyl-tRNA formyltransferase sunL 450270 - 451583 + | putative RNA-binding Sun protein; rRNA methylase TERM 520 451738 - 451775 + G 78 -9.9 -3.32769 | GGCAGATGGCATGGG CGGTCATCGTGCTGG AAATATAG CCAGTGAGATGACCG TTACTGATTTGGGGC TERM 521 452040 - 452015 - g 70 -9.1 -3.12351 | opp_overlap 452015 452012 GGGGTTTATACGCAA TTGACTAGTGA TCAC TCTCTAGTCAA TGAATTAGTTAAGGC SMU.483 451622 - 452365 + | putative phosphoprotein phosphatase (pppL protein) pknB 452362 - 454212 + | putative serine/threonine protein kinase TERM 522 454271 - 454222 - f 100 -11.1 -4.80736 | gap 1, opp_overlap 454231, overlap 454231 CATTAAATAAAGAAA TAGGT-AAAACAAGGACTGAGAAG AAT CTTCTCAATCCTTGTTTTTATATA TCATGGCTCGAACTA TERM 523 454231 - 454261 + F 100 -15.6 -5.05601 | opp_overlap 454231 454222 AAGAAATAGGTAAAA CAAGGACTGAGAAG AAT CTTCTCAATCCTTG TTTTTATATATCATG TERM 524 454261 - 454231 - f 100 -17.8 -4.34811 | opp_overlap 454231, overlap 454222 AAGAAATAGGTAAAA CAAGGACTGAGAAG AAT CTTCTCAATCCTTG TTTTTATATATCATG TERM 525 454795 - 454805 + G 71 -3.2 -5.06816 | TTTATCGTTTAGGCA GTCG AAA TGAC TTTTTATTGACAGCT TERM 526 454997 - 454986 - g 80 -5.8 -5.15634 | opp_overlap 454986 454985 GATGTGACTAAAAAA CCAC ATCA GTGG ATTGGTAATGATGAA SMU.485 454530 - 455348 + | hypothetical protein SMU.486 455345 - 456349 + | putative histidine kinase TERM 527 456697 - 456679 - g 70 -7.6 -3.60627 | CCAGCGCAGCTGAAA TTTTGAAT GCC ATTCAAAA AGTAGCTAAGGGAGA SMU.487 456336 - 456983 + | putative response regulator SMU.488 457027 - 458442 + | putative hydrolase SMU.489 458420 - 458812 + | hypothetical protein TERM 528 458873 - 458828 - T 95 -8.7 -5.00616 | gap 2, opp_overlap 458828 GTGTTCGTTAAAAAA CTGCATCTTTAAG--TTGGAC AGAAAA ATCCAAAACTTAAAGATGCAG TTTTTTATTTTATAT TERM 529 458828 - 458873 + T 100 -8 -5.8901 | gap 2, opp_overlap 458828 GTGTTCGTTAAAAAA CTGCATCTTTAAG--TTGGA CAGAAAAA TCCAAAACTTAAAGATGCAG TTTTTTATTTTATAT pflC 459667 - 458891 - | putative pyruvate formate-lyase activating enzyme TERM 530 459266 - 459255 - G 70 -3 -5.02323 | TCAGTATAAATAAAA TCAA CATA TTGA ATCAAATCGGTAAAT SMU.491 459798 - 460544 + | putative DeoR-type transcriptional regulator TERM 531 461026 - 461011 - g 70 -4.8 -4.61231 | TTACATGCTTAAAAA CATTTT AGAA AAAATG TCGCTCTATATTGAT pfl2 460793 - 463249 + | formate acetyltransferase (pyruvate formate-lyase 2) TERM 532 463797 - 463823 + G 75 -9.5 -3.23216 | opp_overlap 463820, overlap 463798 TTACTCAGGTTGCCA AGGCTTTAGCA GCGGG TGCTAAAGCCG TTACTGCTGGTGCAG TERM 533 463798 - 463822 + G 89 -13 -2.53715 | opp_overlap 463820, overlap 463797 TACTCAGGTTGCCAA GGCTTTAGCA GCGGG TGCTAAAGCC GTTACTGCTGGTGCA SMU.494 463268 - 463936 + | fructose-6-phosphate aldolase TERM 534 463923 - 463949 + F 86 -9.6 -4.05788 | opp_overlap 463916 463922 AAAGCACACAAGGAC GTCCTTATATTT AAA AAATAAAAGGAC TTTACTTTAGAAGGA gldA 463971 - 465065 + | glycerol dehydrogenase TERM 535 465205 - 465171 - T 85 -10.3 -3.51563 | opp_overlap 465171, overlap 465174 AAAAGCTTGAGAGAA TAATCTGATTCCT AAATGCAAG AGGAATCAGATTA TTTTTTGTGTTGGAA TERM 536 465171 - 465205 + T 100 -10.3 -5.47159 | opp_overlap 465171 465174 AAAAGCTTGAGAGAA TAATCTGATTCCT AAATGCAAG AGGAATCAGATTA TTTTTTGTGTTGGAA TERM 537 465202 - 465174 - T 74 -7.6 -3.885 | opp_overlap 465171, overlap 465171 AGCTTGAGAGAATAA TCTGATTCCT AAATGCAAG AGGAATCAGA TTATTTTTTGTGTTG cysK 466325 - 465399 - | putative cysteine synthetase A; O-acetylserine lyase SMU.497c 467045 - 466416 - | hypothetical protein TERM 538 467202 - 467186 - g 70 -5.1 -4.62783 | CAGTGATTTGAAAAA GCAAGCT AAA ATCTTGC CAGCTATGATAAAAA comF 467118 - 468419 + | putative late competence protein TERM 539 468474 - 468495 + G 76 -5.3 -4.86731 | gap 1, overlap 468476 468477 ATTTCTATTCTATTT TCTTCTTGAA AAC TTCAAGA-GA TTTTGTTTGCCCACC SMU.499 468416 - 469081 + | putative late competence protein TERM 540 469142 - 469131 - f 79 -7.2 -4.4078 | ATAATAATGAAGAAA GCGC TTAA GCGC GAGAAAAGAGGTAAC SMU.500 469160 - 469708 + | putative ribosome-associated protein TERM 541 469727 - 469749 + F 79 -3.4 -5.63504 | overlap 469747 AATTAATACTAATAA GTCAATTCAT TAA GTGGGTTGGC TTTTTTTATAGCCTT SMU.501 469832 - 470926 + | hypothetical protein SMU.502 470946 - 472646 + | hypothetical protein TERM 542 472646 - 472691 + T 100 -11.6 -5.0916 | opp_overlap 472651, overlap 472651 AAATACAGTTGACTA AAAAATACTTTAATGGATTT TTCAAT GAATCCATTAAAGTATTTTA TTTTTCTCTTACCAG TERM 543 472651 - 472686 + T 100 -11.5 -5.40873 | opp_overlap 472651, overlap 472646 CAGTTGACTAAAAAA TACTTTAATGGATTT TTCAAT GAATCCATTAAAGTA TTTTATTTTTCTCTT TERM 544 472686 - 472651 - T 100 -10.8 -5.15634 | opp_overlap 472651 472646 CAGTTGACTAAAAAA TACTTTAATGGATT TTTCAATG AATCCATTAAAGTA TTTTATTTTTCTCTT SMU.503c 473361 - 472726 - | hypothetical protein dam 473630 - 474487 + | putative site-specific DNA-methyltransferase TERM 545 474990 - 474963 - g 76 -2.8 -5.47914 | AAAAATGATAAAAAA TCAAAACATTAT TATA ATTATGATTTGA TGAAAAAAATCAATG TERM 546 475084 - 475062 - g 72 -5.5 -4.67168 | AAAAAGTCCGAAAAA TGGGCTGGG AAACA CCCAACTCA AAAGCCAGAATATTT SMU.505 474477 - 475286 + | putative adenine-specific DNA methylase SMU.506 475270 - 476208 + | putative type II restriction endonuclease TERM 547 476535 - 476518 - f 88 -6.3 -5.38497 | opp_overlap 476518 ATCTAAATCAAAAAA CCAACAT CTGA ACGTTGG CTTTTTTAGTATATT TERM 548 476634 - 476685 + F 100 -17.8 -3.35073 | opp_overlap 476631 TAGAAATATAAGGTT TTGCAAGTATTCTTAAGTGTTTTT ACAT ACAAATACTTAAGAATACTTGCGA TTACTTAAAAATCAT TERM 549 476982 - 476971 - g 79 -4.4 -5.22289 | GATGAAAGAGAAAAA TGAG ATTG CTCA GAAGGCTTACCAATT SMU.507 476732 - 477478 + | DeoR family transcriptional regulator TERM 550 478027 - 478037 + G 74 -5.4 -4.81249 | AAACGAGTGAATTTT GAAG ATG CTTC TTTTTACCTTTCGAA SMU.508 477490 - 478314 + | hypothetical protein TERM 551 478323 - 478344 + F 79 -3.7 -5.58179 | opp_overlap 478297 AATTTAAAACAGAGA TCAAGTGGT TTTT GCTGCTTGA TTTTTTGTTATAATA TERM 552 478999 - 478985 - g 70 -7.2 -3.78778 | opp_overlap 478982 478983 478985, overlap 478982 TTATCATATGAACAA GAAATC TTG GATTTC TCTTGTTTTAGATGA SMU.509 478383 - 479447 + | hypothetical protein SMU.510c 480157 - 479522 - | hypothetical protein SMU.512c 480740 - 480285 - | hypothetical protein TERM 553 480702 - 480690 - G 76 -4.9 -5.10208 | GAAGGTGAAGAAAAA GATAA TAA TTATC AGAAATTTTGGATTT SMU.513 481136 - 481369 + | hypothetical protein TERM 554 481498 - 481508 + F 88 -6.8 -5.26316 | opp_overlap 481498 ATCACTAACAGCATA GTCC AAT GGAC TTTTTTGTGAACTAA TERM 555 481632 - 481611 - g 79 -3.7 -5.4148 | overlap 481603 CAAACAACTAAAAAA GCTTTAGAG GACT CTCTCAAAC ATTTGTTGTTACAAA TERM 556 481689 - 481704 + G 77 -10.4 -2.9432 | opp_overlap 481688 481685, overlap 481685 GACATAACAGATGAT TGCGGC ATTA GCCGCA TGACTTTTTATTATC SMU.514 481590 - 482156 + | putative transcriptional regulator TERM 557 482683 - 482663 - g 71 -3.9 -4.8622 | overlap 482639 482667 CCGTGCAACGAAAAA GCAAGGACA AGA TGCCCATAC TGATAAAAAATTTAC SMU.515 482277 - 484052 + | putative 67 kDa myosin-crossreactive streptococcal antigen TERM 558 484094 - 484121 + F 87 -7.9 -4.81212 | opp_overlap 484096 ATTTTATGCTCAATG GAGATTAGGAT TATTGT ATTCTAATCTC TTTTGTTATCATAAA SMU.516 484636 - 485175 + | hypothetical protein coaD 485165 - 485665 + | phosphopantetheine adenylyltransferase TERM 559 486622 - 486612 - g 71 -4 -5.0133 | CAGGCTGCTAAAAAA TTAG GCA CTAA GATGAAGATTGTCCC SMU.518 485643 - 486683 + | hypothetical protein TERM 560 486684 - 486712 + F 100 -10.5 -4.91977 | opp_overlap 486684 486688, overlap 486689 CTAAGAAAACACTAA TAAAGGTTCTAGA ATT TCTAGGACTTTTA TTTTCTCTTTTAATA TERM 561 486689 - 486707 + F 93 -8.2 -5.2894 | opp_overlap 486688 486684, overlap 486684 AAAACACTAATAAAG GTTCTAGA ATT TCTAGGAC TTTTATTTTCTCTTT TERM 562 487042 - 487022 - g 83 -11.3 -3.5332 | opp_overlap 487011 487025 487040, overlap 487011 487018 487038 AAAGGCTGAAATCAA TCAGCTTTA TCA TAAAGCTGA CTTCCAAGTCATCTT TERM 563 487239 - 487227 - g 76 -4.9 -5.03314 | opp_overlap 487217, overlap 487229 TCCAGTCTTAAAAAA GATTT GGA AAATC CAGAGGTAGCGGCAG SMU.520 486756 - 488087 + | hypothetical protein TERM 564 488394 - 488406 + G 71 -3.3 -5.07652 | AAGAATATTGCAATT TTGGC TGT GCCTA TTTTGTTTTGGAAAA SMU.521 488084 - 488632 + | hypothetical protein SMU.522 488629 - 489714 + | hypothetical protein SMU.523 489714 - 490250 + | hypothetical protein TERM 565 490237 - 490259 + F 76 -5.5 -5.06505 | opp_overlap 490237 AACAGAAATCTCAAA GTGGTAAGG CTTGA CCTTTCCGC TTTTTGTATGTAATT TERM 566 490355 - 490374 + F 83 -5.7 -5.18726 | opp_overlap 490349, overlap 490356 AATGTAAAAGAAGGT TTCCCTC AGATGA GAGGGAG TTTTTCTTGTCAAAA SMU.524 490389 - 492152 + | putative ABC transporter, ATP-binding protein SMU.525 492142 - 493884 + | putative ABC transporter, ATP-binding protein TERM 567 493936 - 493908 - T 90 -4.8 -5.87996 | gap 1, opp_overlap 493908 TAACTAATAAAAAAA GTTGGATAA-TAT ACGT ACACTTATCCAAC TTTTTTGTAAATTCT TERM 568 493908 - 493936 + T 76 -3.3 -5.3236 | opp_overlap 493908 TAACTAATAAAAAAA GTTGGATAA TATACGTACAC TTATCCAAC TTTTTTGTAAATTCT SMU.526c 494787 - 493951 - | putative transcriptional regulator TERM 569 494804 - 494820 + H 71 -8.1 -3.33782 | ACATTTCTCCTTGAC TCTATAG TTA CTATAGA TATTATAATATATTT SMU.527 495084 - 496118 + | hypothetical protein SMU.528c 496538 - 496257 - | hypothetical protein SMU.529 496432 - 496545 + | hypothetical protein TERM 570 496697 - 496680 - TR 84 -6.3 -5.30155 | opp_overlap 496680 TGAGCAAGTAAAAAA GCCAGAT GTTT ATCTAGC TTTTGGTATTAGAAT SMU.530c 497462 - 496725 - | hypothetical protein TERM 571 496890 - 496880 - G 71 -6.8 -4.11371 | opp_overlap 496873 TAAGATTGGCTAAAA TGGC CCA GCCA ATAAAGCTTAACTGA TERM 572 498083 - 498107 + H 100 -17.3 -5.64304 | opp_overlap 498080 AGCTAGATTTAACGC CCTCACACAGA TTT TCTGTGTGAGG TTTTTTGTTATCTTC SMU.531 498134 - 498445 + | putative chorismate mutase trpE 498454 - 499815 + | anthranilate synthase component I trpG 499812 - 500375 + | anthranilate synthase component II trpD 500396 - 501403 + | anthranilate phosphoribosyltransferase trpC 501396 - 502163 + | indole-3-glycerol-phosphate synthase TERM 573 502501 - 502489 - g 74 -7.7 -4.00526 | opp_overlap 502489 502487 AATTTGACAAGTAAA GCAGA TTA TCTGC TCTTTGATGCTCCCA trpF 502150 - 502731 + | N-(5'-phosphoribosyl)anthranilate isomerase trpB 502728 - 503939 + | tryptophan synthase subunit beta trpA 503943 - 504725 + | tryptophan synthase subunit alpha TERM 574 504734 - 504770 + T 77 -4.5 -5.25656 | gap 1, overlap 504769 AAAATAATTATTCAA TCAGCCAGTC-GGGAA TGTTGT TTCTCTGATGGGCTGA TTTTTTAATCCTTTT SMU.539c 505618 - 504962 - | signal peptidase type IV TERM 575 505042 - 505015 - G 79 -9.4 -3.76065 | gap 1, opp_overlap 505020, overlap 505020 CGAATAAGAAAGGAA CAAAAGCA-AAAG GTT CTTTGTGCTTTTG AAAAAGCAGGCTGTA TERM 576 505796 - 505784 - g 75 -2 -5.49579 | GGAGAAAAAAGAAAA TTCA GGAAA TGAA AAAACCAAGGCTGTA dpr 505719 - 506246 + | peroxide resistance protein Dpr SMU.541 506453 - 506659 + | hypothetical protein glk 506652 - 507623 + | putative glucose kinase SMU.543 507633 - 508022 + | hypothetical protein TERM 577 508115 - 508152 + G 71 -4.1 -4.89567 | opp_overlap 508112 508121, overlap 508121 ATTTTATAAAATTTG GAGATACCAAGACTGCG ACTT TGCTATCTTGGTTTTTC TTTTATATTTTAAAA TERM 578 508121 - 508146 + G 83 -3.9 -5.60556 | opp_overlap 508112 508121, overlap 508115 TAAAATTTGGAGATA CCAAGACTGCG ACTT TGCTATCTTGG TTTTTCTTTTATATT SMU.545 508090 - 508230 + | hypothetical protein TERM 579 508624 - 508610 - g 74 -5 -5.00616 | TTTGTTTTGAAAAAA GCTTTG GAA CAAAAC CTGGTTCCAATCGTG SMU.546 508256 - 510100 + | putative GTP-binding protein SMU.547 510129 - 510383 + | hypothetical protein murD 510572 - 511927 + | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase murG 511930 - 513015 + | N-acetylglucosaminyl transferase ftsQ 513015 - 514139 + | putative cell division protein FtsQ (DivIB) TERM 580 514181 - 514203 + F 85 -4.9 -5.69473 | opp_overlap 514181 TTCTATAACAAAAAA CGTAAAAAG CTTAA CATTTTACG TTTTTTTATGGTATA TERM 581 514203 - 514181 - f 87 -5.6 -5.55769 | opp_overlap 514181 TTCTATAACAAAAAA CGTAAAAAGC TTA ACATTTTACG TTTTTTTATGGTATA TERM 582 515373 - 515389 + G 73 -8.1 -3.68569 | CAGAAATCCTATGTT TGCTAAT ATT ATTAGCA TTGTTGAATACGTAG ftsA 514291 - 515652 + | cell division protein FtsA ftsZ 515676 - 516980 + | cell division protein FtsZ ylmE 516983 - 517654 + | hypothetical protein ylmF 517668 - 518243 + | hypothetical protein ylmG 518243 - 518503 + | hypothetical protein TERM 583 518589 - 518571 - g 72 -2.4 -5.1848 | overlap 518572 518575 AAGTAATTGAAAAAA CGTATGAT CTG ATCAAACA GGTAGAGGATACTTA TERM 584 518689 - 518700 + G 71 -4.4 -4.71223 | AAAACTACAGGTTTA TCAG AGTT CTGA TTTTATCTCTTCTGA ylmH 518507 - 519298 + | hypothetical protein divIVA 519309 - 520124 + | putative cell division protein DivIVA TERM 585 520390 - 520415 + F 100 -9.1 -5.59655 | TTAAGGTGGTACCAC GAGCTTTCGTC CTTT GATGAAAGTTC TTTTTTATTGATTTA TERM 586 521851 - 521840 - g 90 -4.4 -5.7946 | TGGCGAACAAAAAAA CCAA TTAT TTGG CGTGCAGTCCCACAA TERM 587 521912 - 521888 - g 71 -6.5 -4.07568 | opp_overlap 521888 GCCTCTGTTTCAAAA TTCCGTCAAGA TAT TCTTGATGAAA TTGATAAGGTTCATT TERM 588 522463 - 522434 - g 70 -5.1 -4.55128 | overlap 522457 ATGTCTAAATCAAAA GGAAACATTATTT CGCC AAATGATGTTGCC AAACAATATGGTGCT ileS 520634 - 523426 + | isoleucyl-tRNA synthetase TERM 589 523477 - 523430 - T 74 -2.9 -5.41941 | opp_overlap 523430 523442, overlap 523433 GAAAGCAAATAAAAA GAC-TGAGCTCTTTCGTTCTCAA AAAT TTGAGAATGAT-GAGTTCAAGTC TTTTTTGCTTTCTAG TERM 590 523430 - 523477 + T 100 -7.3 -5.42514 | opp_overlap 523430 523433, overlap 523442 GAAAGCAAATAAAAA GAC-TGAGCTCTTTCGTTCTCAA AAAT TTGAGAATG-ATGAGTTCAAGTC TTTTTTGCTTTCTAG TERM 591 523442 - 523465 + T 71 -9 -2.55267 | opp_overlap 523433 523430, overlap 523430 AAAGACTGAGCTCTT TCGTTCTCAA AAAT TTGAGAATGA TGAGTTCAAGTCTTT TERM 592 523563 - 523590 + T 76 -9.4 -3.08415 | gap 1, opp_overlap 523570 523571, overlap 523571 TGGCCTTTATTCTAC CTTAAAAGGGTCT GTG AGACC-TTTTAAG CTTGTTTGTAGTTGG TERM 593 523571 - 523583 + T 80 -7.7 -4.2573 | opp_overlap 523570 523571, overlap 523563 ATTCTACCTTAAAAG GGTCT GTG AGACC TTTTAAGCTTGTTTG TERM 594 523854 - 523827 - T 100 -14.3 -4.36914 | TCCGCCGTGATAAAA GTGCCTGAAAC TTTAAT GTTTCAGGCAC TCGGAAGATTTGAGA TERM 595 523861 - 523884 + T 74 -9 -3.05384 | gap 1, opp_overlap 523863, overlap 523863 TTCAGGCACTCGGAA GATTTGAGACC TTA GG-CTCAAATC TTAACTGACCACGGG TERM 596 524077 - 524062 - T 71 -7.6 -3.48593 | CAGGTTGGGACATAA GGAAAC GAAA GTTTCC TCATCGCTACCGTCC SMU.560c 524525 - 524199 - | hypothetical protein SMU.561c 525083 - 524568 - | MutT family hydrolase TERM 597 525114 - 525128 + r 72 -5.7 -4.53602 | opp_overlap 525114 GAAAAAAAGAAAAAA TCAGG AAAGA CCTGA TTTCTTTAATCTGAA TERM 598 525128 - 525114 - R 100 -5.7 -6.12458 | opp_overlap 525114 GAAAAAAAGAAAAAA TCAGG AAAGA CCTGA TTTCTTTAATCTGAA clpE 527395 - 525134 - | ATP-dependent protease ClpE TERM 599 527095 - 527107 + g 76 -10.5 -2.81088 | overlap 527094 527104 CCTGTTGCTGAGGTC CGCCG GGA CGGCG ATTATTGCCTCCGTT TERM 600 527130 - 527156 + g 74 -8.7 -3.57615 | gap 1, overlap 527131 CCTCCGTTGCCATTG C-CGCCGCCAGC TTGT GTTGGCGGTGTG TTTGGCAGATCTTGA TERM 601 527131 - 527154 + g 89 -12.4 -3.36341 | overlap 527130 CTCCGTTGCCATTGC CGCCGCCAGC TTGT GTTGGCGGTG TGTTTGGCAGATCTT SMU.563 527652 - 528632 + | ornithine carbamoyltransferase SMU.564 528709 - 528939 + | hypothetical protein TERM 602 528987 - 528955 - T 76 -5.6 -5.09895 | gap 1 TAGTTATTCAAAAAA GGGGTCTGGAACAAA AGAG TTTGTACT-GACCCC AAAAAGTTAGACAAA TERM 603 529016 - 529048 + T 95 -10.7 -4.69549 | opp_overlap 529016 AAAAATTTAAGTAAA GGATTTCGTTCTGTA CTG TACAGGACTAAGTCC TTTTAGTTTTACCTT SMU.565c 529843 - 529007 - | putative transposase, ISSmu1 TERM 604 529273 - 529287 + g 72 -7.8 -3.78022 | opp_overlap 529273 529272 GATGATAAAAATCAT GCTGGT ATT GCCAGC TTTGGTCACTATGAA TERM 605 529848 - 529860 + r 79 -4.8 -5.31855 | TCCGTTACCAATCCT CGGA CAATT TCCG TTTTTCTTCTTGCTC SMU.566c 530355 - 529837 - | hypothetical protein TERM 606 530404 - 530364 - H 100 -17.2 -5.19328 | opp_overlap 530361 530399 ATTTCATAATAAAAA CACCCCAAAAGTTAGA TTTTTTCTG TCTAACTTTTGGGGTG CAGTTCAGTTCTGGA SMU.567 530592 - 531278 + | putative glutamine ABC transporter, permease component TERM 607 531341 - 531331 - g 72 -5.4 -4.57837 | overlap 531317 ACATTTTGGTAAAAA TGAG GTA CTCA AGGGAATTGACCTTG SMU.568 531278 - 532012 + | putative amino acid ABC transporter, ATP-binding protein feoA 532205 - 532681 + | putative ferrous ion transport protein A feoB 532678 - 534828 + | putative ferrous ion transport protein B SMU.571 534841 - 534993 + | hypothetical protein folD 535113 - 535967 + | putative tetrahydrofolate dehydrogenase/cyclohydrolase TERM 608 536575 - 536562 - g 78 -3.1 -5.38249 | ATCAAGGACAAAAAA TCGGA CATA TCCAA GTTGGCGGTCCCTAT SMU.573 535964 - 536797 + | hypothetical protein TERM 609 537061 - 537098 + T 100 -14.3 -3.24924 | opp_overlap 537066, overlap 537066 CATACCCCTACTTTT AAAAAGCCTTTCGCGGA ACCA TCCGTGAGAGGCTTTTG TCTTATCGATAGCAG TERM 610 537093 - 537066 - T 93 -9.8 -4.59773 | opp_overlap 537061 537066 CCCTACTTTTAAAAA GCCTTTCGCGGA ACCA TCCGTGAGAGGC TTTTGTCTTATCGAT TERM 611 537066 - 537093 + T 100 -14.2 -4.74285 | opp_overlap 537066, overlap 537061 CCCTACTTTTAAAAA GCCTTTCGCGGA ACCA TCCGTGAGAGGC TTTTGTCTTATCGAT SMU.574c 537854 - 537123 - | hypothetical protein TERM 612 537188 - 537168 - G 70 -7.5 -3.57213 | overlap 537164 GATAGGAATAACCAA GTCAACGAC GAG GCCGATGAC AACAACTGCGATGGC TERM 613 537566 - 537576 + g 81 -5.4 -5.19328 | CCTTCCAATATTTTT TGAC AGC GTCA TTTTTCTTATAAAGT SMU.575c 538323 - 537856 - | hypothetical protein TERM 614 538439 - 538414 - R 90 -4.8 -5.78622 | CGATTGCAAAAAAAA GAAGCTGAAT TGCAAT ATCCAACTTC TTAACGCCAATGTAA lytR 539233 - 538499 - | putative response regulator LytR lytS 540956 - 539214 - | putative histidine kinase LytS TERM 615 540326 - 540338 + g 70 -7.7 -3.55604 | overlap 540324 CATCCCGAGTCTGAA CAGCT CTC AGCTG TCTTTCATTGGATAA TERM 616 541828 - 541809 - gH 77 -6.4 -4.57569 | overlap 541812 GCAGTTTGTTAAAAA GATTGGTG TTGT CACCAGTC CTAGTGGAGCGGTTA TERM 617 542566 - 542554 - gH 72 -5.5 -4.56597 | opp_overlap 542554 GCCCGTTTTGAAAAA GCACA AGA TGCGC TTTTGTCACTGGATA xseA 541399 - 542742 + | exodeoxyribonuclease VII large subunit xseB 542717 - 542938 + | exodeoxyribonuclease VII small subunit SMU.582 542935 - 543804 + | putative farnesyl diphosphate synthase SMU.583 543797 - 544624 + | putative hemolysin SMU.584 544611 - 545075 + | putative arginine repressor TERM 618 545760 - 545746 - g 72 -7.2 -3.95653 | opp_overlap 545745 545742 545746 AAACAACGTGATAAA CTTATG AAT CATAAG CTTATTGTTGATACC recN 545092 - 546750 + | DNA repair protein RecN SMU.586 546972 - 547811 + | hypothetical protein TERM 619 548159 - 548144 - gf 79 -4.8 -5.186 | GAAAAGAGAGAAAAA TTCAAA AAAG TTTGAA TAAGGCTAATTTAAT SMU.587 547804 - 548661 + | hypothetical protein SMU.588 548636 - 549235 + | hypothetical protein TERM 620 549375 - 549362 - g 71 -6.7 -4.14243 | opp_overlap 549362 GATTTGATTGCAAAA GTAGC AGAA GCTAC TGAATTGACTAAGAA SMU.589 549332 - 549607 + | putative DNA-binding protein TERM 621 549703 - 549745 + T 90 -11.5 -3.43234 | opp_overlap 549707, overlap 549708 TGGACAAGAAATTAT TGAAGGGATTTAGTCCTGT ATTGC ACAGGGCTGAGTCCTTTTA GTTTTGTCTTGATTC TERM 622 549708 - 549740 + T 100 -11.4 -4.76874 | opp_overlap 549707, overlap 549703 AAGAAATTATTGAAG GGATTTAGTCCTGT ATTGC ACAGGGCTGAGTCC TTTTAGTTTTGTCTT SMU.590c 549899 - 549699 - | putative transposase, fragment SMU.591c 551145 - 550027 - | hypothetical protein TERM 623 550435 - 550449 + g 93 -5 -5.81032 | CCCTAGCATATCACC CGAGAT ACC ATCTTG TTTTTTTTCAACTTC TERM 624 550681 - 550695 + g 76 -7.2 -4.34486 | ATCAGTATGACGTTT TTGGAT GAT ATCCAA TTGTTTATTGTTAAT TERM 625 550707 - 550717 + g 80 -2.6 -5.54079 | CCAATTGTTTATTGT TAAT TTT ATTA TTTTTTAATTTTTGA SMU.592c 551793 - 551152 - | putative transcriptional regulator TERM 626 551796 - 551849 + H 80 -6.5 -4.79683 | gap 1, opp_overlap 551811 551815, overlap 551793 551801 551803 551805 TTCGTCTCGCCATAA GAGATCCTCCTATAATTAATTAAACT AGC GGTTTAATTAATTATAGTAT-ATTTC TTTCTTTTGTCAATT TERM 627 551801 - 551845 + H 74 -5.3 -4.91046 | opp_overlap 551811 551815, overlap 551793 551796 551803 551805 CTCGCCATAAGAGAT CCTCCTATAATTAATTAAACT AGC GGTTTAATTAATTATAGTATA TTTCTTTCTTTTGTC TERM 628 551803 - 551843 + H 100 -12.3 -4.03308 | opp_overlap 551811 551815, overlap 551793 551801 551796 551805 CGCCATAAGAGATCC TCCTATAATTAATTAAACT AGC GGTTTAATTAATTATAGTA TATTTCTTTCTTTTG TERM 629 551805 - 551841 + H 100 -14.9 -3.5593 | opp_overlap 551811 551815, overlap 551793 551803 551801 551796 CCATAAGAGATCCTC CTATAATTAATTAAACT AGC GGTTTAATTAATTATAG TATATTTCTTTCTTT furR 552056 - 552532 + | putative ferric uptake regulator protein FurR SMU.594 552595 - 552750 + | hypothetical protein TERM 630 552754 - 552783 + T 100 -17.3 -4.34402 | opp_overlap 552754 TTTGATTTTTAAAAA GACCTGACTGAGG AGAT TCTCAGTCAGGTC TTTTGGTATACAGAA TERM 631 552783 - 552754 - T 100 -16.6 -4.59773 | opp_overlap 552754 TTTGATTTTTAAAAA GACCTGACTGAG GAGATT CTCAGTCAGGTC TTTTGGTATACAGAA pyrD 553748 - 552813 - | dihydroorotate dehydrogenase 1A pmgY 553966 - 554658 + | phosphoglyceromutase TERM 632 554761 - 554788 + F 100 -6.3 -5.77677 | ATAATAGTGATTTGA GAGGTTAGGAT TTTGTT ATCCCGACCTC TTTTTTCTTATTTTC TERM 633 555718 - 555700 - g 80 -6 -5.07053 | AACTATGTTAAAAAA GGTTATTC TCT GAATGACC GCGTTGGAACATCTT pbp2b 554905 - 556983 + | penicillin-binding protein 2b recR 556993 - 557592 + | recombination protein RecR TERM 634 557645 - 557669 + F 83 -5.8 -5.29385 | opp_overlap 557645 TTTTTCTAAAAAAAA CCAATTGG CCGATATTT CCAATTGG TTTTTTCGTTGAATT TERM 635 557669 - 557645 - f 95 -5.8 -5.75342 | opp_overlap 557645 TTTTTCTAAAAAAAA CCAATTGG CCGATATTT CCAATTGG TTTTTTCGTTGAATT ddl 557804 - 558853 + | D-alanyl-alanine synthetase A TERM 636 558999 - 559020 + T 78 -9.5 -3.24289 | opp_overlap 558999 ATGGGCTACAAAAAA TCAGAGAGG GATG TCTCTCTGA TTAACTATTTAAAAT TERM 637 559020 - 558999 - T 95 -8.8 -5.24531 | opp_overlap 558999 ATGGGCTACAAAAAA TCAGAGAG GGATGT CTCTCTGA TTAACTATTTAAAAT SMU.600c 559585 - 559025 - | hypothetical protein TERM 638 559728 - 559747 + H 82 -6.4 -5.07652 | overlap 559730 CGAATCATCTACTCT GTGCAAAG CAGG CTTTGCTC TTTTATTTTACCACA TERM 639 559730 - 559745 + H 80 -7.6 -4.16397 | overlap 559728 AATCATCTACTCTGT GCAAAG CAGG CTTTGC TCTTTTATTTTACCA TERM 640 560180 - 560196 + G 74 -10.1 -2.72052 | overlap 560180 TCACTATGTTATTAT GCCGAGC TTG GCTTGGC TGCTCTGCTTGATTT SMU.602 559938 - 560888 + | putative sodium-dependent transporter TERM 641 560941 - 560929 - f 72 -4.8 -4.78237 | opp_overlap 560929, overlap 560924 TATGTTATAATAAAA GAGC GAAAA GCTC TTTTTATTTTTTAGG TERM 642 560929 - 560941 + F 90 -4.8 -5.75538 | opp_overlap 560929 560924 TATGTTATAATAAAA GAGC GAAAA GCTC TTTTTATTTTTTAGG murF 560966 - 562324 + | putative D-Ala-D-Ala adding enzyme; UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6- diaminopimelate-D-alanyl-D-alanyl ligase pentapeptide synthase TERM 643 562332 - 562358 + F 95 -8.9 -5.0133 | opp_overlap 562356 AAGGGTAAAATTTTA TAGTTCTGAAT TGAAT GTTCAGAACTA TTTTTTGAAAAAGTA SMU.604 562431 - 562706 + | hypothetical protein SMU.605 562712 - 563263 + | hypothetical protein SMU.606 563276 - 564523 + | hypothetical protein SMU.607 564579 - 565262 + | hypothetical protein prfC 565446 - 566990 + | peptide chain release factor 3 TERM 644 567020 - 567043 + F 79 -2.5 -5.74122 | gap 1, overlap 567012 AATCTTATAAATAAG CATC-AACCA TTTCT TGGTTTGGTG TTTTTTTATATAGTA SMU.609 567244 - 569079 + | putative 40K cell wall protein precursor TERM 645 569090 - 569111 + F 91 -5.2 -5.75599 | opp_overlap 569090 ATTGAAGTAAAAAAG GTTAGGAT GACAAA ATCCTGAC TTTTTTTGTGCTTTA TERM 646 569243 - 569230 - f 74 -3.9 -5.27477 | opp_overlap 569230 ATTTCAAGCAAAAAA TTTGA CAAA TCAAA TCAATTATATTACAA TERM 647 569349 - 569333 - g 80 -3 -5.58209 | overlap 569334 TGAAAGTCAAAAAAA CTTACG GTTTT CGTAAA AGTAAAATTAGTAAA TERM 648 571752 - 571741 - g 75 -4.4 -5.07107 | opp_overlap 571741 GAAACTGGCAAAAAA CCAA ATAT TTGG TATTCTTTAAATGGT TERM 649 572563 - 572543 - g 70 -8.3 -3.27511 | overlap 572541 ATAATGCAACTAATA CAGTCACCT TCA AGGCAACTG CAGCAACTTTGGCTA spaP 569317 - 574005 + | cell surface antigen SpaP TERM 650 574036 - 574076 + F 76 -3.6 -5.32565 | gap 2, opp_overlap 574046 ATTAGAATTAAAAAG TGAGATAGAAGCGATAAATC ACA GATTGA--GCTTTTATCTCA TTTTTTGATTAATTA TERM 651 574644 - 574632 - g 74 -4.9 -4.89063 | opp_overlap 574635, overlap 574636 GCATTGAAAAACAAA TTAAG GCT CTTAA ATCAGGAGCCCATAT TERM 652 574759 - 574771 + G 72 -5.5 -4.59511 | opp_overlap 574759 TGAAGCAGATGAAAT GCTCA ACA TGGGC TTTTTAGAAGATATT TERM 653 575686 - 575727 + G 74 -10.1 -2.72461 | opp_overlap 575707, overlap 575685 GGATCGTCGGGGAGG TCGCGACAGTCGCCGTAAT CATC GTGACGGTGGCCGTCGTGA ATTTAAACGGACTTC SMU.611 574295 - 575848 + | ATP-dependent RNA helicase TERM 654 575858 - 575885 + F 95 -8.6 -5.03747 | opp_overlap 575858 AGATAACCATTCAAA TTCTCTTAAAAC ATAT GTTTCAAGAGAA TTTTTTGAAAAGTTT TERM 655 575885 - 575858 - f 89 -10.8 -3.73386 | opp_overlap 575858 AGATAACCATTCAAA TTCTCTTAAAAC ATAT GTTTCAAGAGAA TTTTTTGAAAAGTTT TERM 656 576158 - 576173 + F 84 -6.2 -5.27779 | opp_overlap 576157 ATATTCCAAAAGTAT TCAGAA AATT TTCTGA TTTTTTACTATTAAA SMU.613 576338 - 576616 + | hypothetical protein SMU.614 576710 - 576850 + | hypothetical protein TERM 657 577483 - 577510 + F 100 -14.4 -5.03747 | opp_overlap 577483 AGATAATCATTCAAA TTCTCTTGAAAC ATAT GTTTCAAGAGAA TTTTTTGAAAAGTTT TERM 658 577510 - 577483 - f 100 -14.4 -3.73386 | opp_overlap 577483 AGATAATCATTCAAA TTCTCTTGAAAC ATAT GTTTCAAGAGAA TTTTTTGAAAAGTTT TERM 659 577551 - 577576 + F 74 -6.2 -4.36914 | opp_overlap 577543, overlap 577554 CTCAAATCTTCCGAG TAGCAGAAGC ATCAAC GCTTCTGGTA TTTTATCACAGCGAA TERM 660 577695 - 577710 + F 84 -6.2 -5.27779 | opp_overlap 577694 ATATTTCAAAAGTAT TCAGAA AGAT TTCTGA TTTTTTACTATTAAA SMU.616 577901 - 578149 + | hypothetical protein SMU.618 578253 - 578552 + | hypothetical protein TERM 661 578632 - 578659 + F 100 -10.7 -5.4477 | opp_overlap 578632 CAGAAATCATTCAAA CTCTCCTGAAA CACATA TTTCGGGAGAG TTTTTTTAAAAGTTT TERM 662 578659 - 578632 - f 80 -9.2 -3.75295 | opp_overlap 578632 CAGAAATCATTCAAA CTCTCCTGAAAC ACAT ATTTCGGGAGAG TTTTTTTAAAAGTTT TERM 663 579206 - 579234 + G 84 -6.1 -5.18371 | gap 1 TAAAGATATCTCTGT CTTCCTG-TCTC CGTTTA GAGGTCAGGAAG TTTTATTTTGTGGGA SMU.620 579129 - 579287 + | hypothetical protein SMU.621c 580586 - 579567 - | hypothetical protein TERM 664 580547 - 580559 + g 71 -3.3 -5.05153 | CAGTTGAAAAAAGCT GATCG ACA CGTTC TTTCTTTTTTAAAAT SMU.622c 581144 - 580632 - | hypothetical protein TERM 665 581190 - 581168 - R 76 -8.6 -3.4252 | opp_overlap 581170, overlap 581171 TCCTATTGATTAGAA TAACAGAAAA ATT TTTTCTGCTA ATTGAAAAAAACAAA TERM 666 581187 - 581171 - R 77 -8.1 -3.8512 | opp_overlap 581170, overlap 581168 TATTGATTAGAATAA CAGAAAA ATT TTTTCTG CTAATTGAAAAAAAC SMU.623c 582168 - 581233 - | putative deacetylase TERM 667 582588 - 582576 - g 72 -5.5 -4.62783 | opp_overlap 582580 582581, overlap 582580 GATTGATCGTAAAAA CCCAG GGA CTGAG GCTGTCCGTTATCCT SMU.624 582307 - 583059 + | putative 1-acylglycerol-3-phosphate O-acyltransferase TERM 668 583163 - 583138 - f 71 -7.7 -3.41913 | opp_overlap 583129 583138, overlap 583137 583160 TTTATACCTAAAAAG GAAGTTTAGGA TTTT TACTAAACTTC TTTTTTTTTTACGAA TERM 669 583138 - 583163 + F 100 -7.7 -6.34424 | opp_overlap 583137 583138 583160, overlap 583129 TTTATACCTAAAAAG GAAGTTTAGGA TTTT TACTAAACTTC TTTTTTTTTTACGAA comEA 583200 - 583877 + | putative competence protein TERM 670 584022 - 584034 + G 76 -4.9 -5.17507 | TAGGCAAATCTGTAT CAAAA CAC TTTTG TTTTTATTGCCTTTT TERM 671 584231 - 584221 - g 72 -5.4 -4.61873 | TTTTATAAATTAAAA TCTG AAA CAGA GAAACATTATTTTGA TERM 672 586037 - 586022 - g 75 -3.2 -5.27335 | TTGCGCAAATAAAAA GTCGGA TTTA TCGGAC GGATCAAGAGGGTGC SMU.626 583867 - 586101 + | putative competence protein TERM 673 586099 - 586109 + F 75 -2.6 -5.68438 | ATTGAGACTGTGCGA TAAA TGC TTTA TTTTTTCTTTCATCG SMU.627 586287 - 586913 + | hypothetical protein TERM 674 586933 - 586962 + F 100 -8.6 -5.39721 | opp_overlap 586932 586933 ACTCTATTTATCAAG GGAGTCAGAGAT AAACGA ATCTCAGGCTCC TTTTTTATATGGTCA TERM 675 587204 - 587223 + G 75 -2.2 -5.4593 | TTTAATAAAATTGGC TTTGAATC GAGT GATTTGAA TTTTTCTTATTTTGA TERM 676 587531 - 587519 - g 70 -7.7 -3.5936 | opp_overlap 587489 587518, overlap 587486 GCGAAAGTGCTCAAA GAAGC AGA GCTTC GTACTTATTTTCAAA holA 587081 - 588121 + | DNA polymerase III subunit delta TERM 677 588575 - 588550 - g 76 -5.4 -4.94487 | opp_overlap 588551, overlap 588551 CCAGAAAAGACAAAA GTTACTGCGG AAGTAG CCGCAGCAAT TAATGAAGCTTTTGG TERM 678 588574 - 588551 - g 74 -8.9 -3.55066 | opp_overlap 588551, overlap 588550 CAGAAAAGACAAAAG TTACTGCGG AAGTAG CCGCAGCAA TTAATGAAGCTTTTG TERM 679 588626 - 588610 - g 70 -8 -3.62096 | TTTGATGATTTTAAA GCAGCT TTTAC AGCTGC CGCAACGACGCGTTT sod 588268 - 588879 + | putative manganese-type superoxide dismutase, Fe/Mn-SOD TERM 680 588956 - 588941 - f 74 -6.8 -4.2828 | overlap 588926 TGCTATTTAGTAAAA GCAACC GTAA GGTCGC TATACGCTATAAAGG TERM 681 589137 - 589171 + F 76 -8.8 -3.49618 | opp_overlap 589145, overlap 589145 TTATAAATACGAGTT CTAAAAAAGGAGAA ACTAGTG TTCTCCCTTTTTAG TTAGTTCTCTGGGAA TERM 682 589163 - 589145 - f 73 -4.6 -5.03715 | opp_overlap 589137 589145 ACGAGTTCTAAAAAA GGAGAA ACTAGTG TTCTCC CTTTTTAGTTAGTTC TERM 683 589300 - 589331 + F 82 -2.4 -5.95539 | gap 1 TCTGTTATTAAGAAT GGAATAGC-TCGTTA CAA TTATGAGGTTATTCC TTTTTTTGTTTCAAA TERM 684 589578 - 589568 - g 78 -3.2 -5.42975 | TCAGAGAAAGAAAAA CAGC AGT GCTA AGACTCCCGAATCAA TERM 685 589802 - 589790 - g 70 -4.8 -4.60808 | overlap 589786 TTATAAAAATACAAA GACC AATGA GGTC ATTGCGATGAATGAA SMU.630 589431 - 590486 + | hypothetical protein TERM 686 591335 - 591345 + G 86 -5.4 -5.52347 | ACTGAGTTGATTCTA CTAG GGG CTAG TTTTTTGCTTTTGTT SMU.631 590651 - 591409 + | hypothetical protein TERM 687 591442 - 591470 + F 81 -3.9 -5.64274 | overlap 591443 TCTTGACATTCATCT GCTTTATGTTAAG ATA CTTAACAAAGAGG TTTTTTTATGGATAA TERM 688 591443 - 591469 + F 74 -7.4 -3.9748 | overlap 591442 CTTGACATTCATCTG CTTTATGTTAAG ATA CTTAACAAAGAG GTTTTTTTATGGATA SMU.632 591478 - 591942 + | putative transcriptional regulator TERM 689 591922 - 591942 + F 71 -6.9 -4.13304 | opp_overlap 591922 AAAATTTGGAAAGGA TTGCCTTGG TTA TCAAGGTAA TTTTAAAAATCATTT TERM 690 592710 - 592724 + G 71 -6.4 -4.10161 | opp_overlap 592710 592709 ATGGGCGTTCAAAAG GAGCAG AAT TTGCTC TTTTGGCGGCTAGTC SMU.633 591989 - 593218 + | putative thioesterase queA 594432 - 593404 - | S-adenosylmethionine:tRNA ribosyltransferase-isomerase TERM 691 593889 - 593916 + g 70 -8.4 -3.2486 | gap 1, opp_overlap 593889, overlap 593848 593888 CTTCTGTAAAATGGA GGC-CAGCTGTTG GGG CAGCAGCAGAGCC ATTTTCCTTAGCATA SMU.635 594570 - 595289 + | hypothetical protein TERM 692 595309 - 595345 + F 100 -13.9 -5.71712 | opp_overlap 595311 595315 TTGAAGAAGTTAGAT CAGACAGTCGGGATTAT ACC ATAATCCTGATAGTCTG TTTTTTTATCTAAAG TERM 693 595882 - 595894 + G 78 -3.3 -5.40072 | CACCGTCTACAATTG CAGCT AAT AGCCG TTTTTTTGAAAAAGC SMU.636 595419 - 596120 + | putative N-acetylglucosamine-6-phosphate isomerase TERM 694 596174 - 596188 + T 93 -6.4 -5.67529 | opp_overlap 596174 596169 TCAGATGGAAGAAAA GGGTCA TTT TGATCC TTTTTCTTTTTGATT SMU.637c 596816 - 596313 - | hypothetical protein SMU.638 597135 - 597851 + | putative 16S pseudouridylate synthase TERM 695 597982 - 597998 + G 75 -7.9 -4.03978 | TAGAAGTATTATCCA GCTGCCG GAG CTGCAGC TTTATGTGAAGGATT SMU.639 597866 - 598366 + | putative acetyltransferase SMU.640c 599829 - 598456 - | GntR family transcriptional regulator TERM 696 599000 - 599023 + g 71 -3.9 -4.93365 | overlap 599001 GTAAAAGCATAAGTG TCATCTTCT ATTAGG AGAAGGTGG TTTTTACTTATCAAC TERM 697 599993 - 599982 - g 85 -7.2 -5.1287 | TTTATATTCAAAAAA CGGG AGGA CCCG CAACGATTATTGTTG TERM 698 600413 - 600398 - g 100 -7.6 -5.49568 | AAGCCAAAACAAAAA CTCCTT ATTG AAGGAG CAGCTGGCCATGTGG SMU.641 599957 - 600925 + | putative oxidoreductase TERM 699 601123 - 601143 + F 74 -2 -5.61881 | gap 1, opp_overlap 601118, overlap 601114 601118 601124 601125 GCGTTATAATTCGAT TA-TTCGAT ATAT ATCGAACTA TTTTTATTTTTGGAA TERM 700 601357 - 601346 - g 70 -3 -5.06414 | GTTCTTCAACAAAAA TTCA GAAT TGAA ACATTTATGGGATAC SMU.642 601170 - 601451 + | hypothetical protein SMU.643 601557 - 602450 + | putative esterase TERM 701 602593 - 602583 - f 81 -4 -5.59502 | TAAAAAATTAAAAAA CTTT GAA AAAG ACATCAATTTTTGTT TERM 702 602709 - 602724 + F 74 -3.9 -5.14477 | TTGTAGTTTTTAAAG CCTGC CTTTGC GCGGG TTTTTTAACTATCTA TERM 703 603523 - 603533 + G 76 -5.4 -5.00884 | opp_overlap 603523 AATCTGATAGCACAA TCAG ATG CTGA TTTTTTCCCGCAGGT SMU.644 602758 - 603696 + | putative competence protein/transcription factor TERM 704 604480 - 604493 + G 70 -8.1 -3.25538 | overlap 604478 AAGAGTGCGCGTGAA GCTGC TCTG GCAGC TAATTTTATTCCCGA pepB 603718 - 605517 + | putative oligopeptidase TERM 705 605541 - 605518 - f 85 -11.2 -3.24 | opp_overlap 605523, overlap 605521 AAAGGAATTGATTAA TAAGATAGCT TAAA AGCTATCTTA GGATGAAAACACTTT TERM 706 605538 - 605521 - f 77 -8.5 -3.75105 | opp_overlap 605523, overlap 605518 GGAATTGATTAATAA GATAGCT TAAA AGCTATC TTAGGATGAAAACAC SMU.646 605730 - 606347 + | putative phosphatase TERM 707 606355 - 606376 + F 93 -8.1 -5.22006 | opp_overlap 606354 ATTTCTAAAAATATC TTCCTTAAC CTAA GTTAGGGAA TTTTTGTTATAATAA SMU.647 606397 - 607104 + | putative methyltransferase prsA 607166 - 608167 + | foldase protein PrsA SMU.649 608406 - 608906 + | hypothetical protein TERM 708 610585 - 610597 + G 71 -4.1 -5.00616 | overlap 610577 GCAGTATCAGAAGGC CAAGT TCT GCTTG TTTTTTCGGAGACAC TERM 709 611405 - 611389 - g 76 -3.6 -5.28942 | opp_overlap 611399, overlap 611390 611392 611393 GAGCTGAAAGAAAAA GCAGCC GCAGT AGCCGC AGGCGATATCTTCAA TERM 710 611482 - 611496 + G 70 -7.1 -3.79747 | GAAGTTGCCGATGCG GGTGC CCTTC GCACC TTTGCTGATAAATGG alaS 609121 - 611739 + | alanyl-tRNA synthetase TERM 711 611808 - 611776 - T 89 -12.2 -2.6675 | opp_overlap 611781, overlap 611781 TATTTTATAACTAAT CAAAAGGTTTTGGG TATAT CCCAAAACCTTTTT TGTAATGGTATAATT TERM 712 611781 - 611803 + T 100 -12.1 -5.32882 | opp_overlap 611781 611776 TATAACTAATCAAAA GGTTTTGGG TATAT CCCAAAACC TTTTTTGTAATGGTA TERM 713 611803 - 611781 - T 100 -12.1 -4.51197 | opp_overlap 611781, overlap 611776 TATAACTAATCAAAA GGTTTTGGG TATAT CCCAAAACC TTTTTTGTAATGGTA SMU.651c 612979 - 611951 - | putative ABC transporter, substrate-binding protein TERM 714 612523 - 612510 - G 75 -9.5 -3.29704 | overlap 612508 612506 CGTTTAGCAAAGATA GCGGG ACTG CCCGC AACAGCAGTTACCCC SMU.652c 613748 - 612999 - | nitrate ABC transporter ATP-binding protein TERM 715 613169 - 613186 + g 70 -7.1 -3.8046 | CTTCGACATCATGAG TTACCAT GATC ATGGTAA TTTGGCGTTTTTGCC SMU.653c 614728 - 613742 - | putative ABC transporter, permease protein mutF 614935 - 615639 + | putative ABC transporter, ATP-binding protein MutF mutE1 615641 - 615889 + | putative MutE mutE2 615874 - 616389 + | putative MutE mutG 616389 - 617135 + | putative MutG SMU.658 617511 - 618350 + | hypothetical protein SMU.659 618390 - 619049 + | putative response regulator SpaR TERM 716 620285 - 620303 + G 72 -8.8 -3.29626 | opp_overlap 620277 GATACCAGCCGTCAT GACCGCAA GCA TAGCGGTC TTGGTCTAACTATTG SMU.660 619040 - 620422 + | putative histidine kinase SpaK TERM 717 620444 - 620491 + F 79 -7.3 -4.36595 | opp_overlap 620458, overlap 620447 620458 620485 TTTTATTAATATCTT TTATAAACAAAAAACGGAAAT AAAATG ATTTCCGTTTTTTGCATATTA TTTTAGATTTGACTA TERM 718 620447 - 620488 + F 88 -9 -4.29139 | opp_overlap 620458, overlap 620444 620458 620485 TATTAATATCTTTTA TAAACAAAAAACGGAAAT AAAATG ATTTCCGTTTTTTGCATA TTATTTTAGATTTGA TERM 719 620458 - 620477 + F 84 -6.5 -5.17054 | opp_overlap 620458, overlap 620447 620444 TTTATAAACAAAAAA CGGAAAT AAAATG ATTTCCG TTTTTTGCATATTAT TERM 720 620477 - 620458 - f 100 -6.5 -5.72622 | opp_overlap 620447 620444 620458 TTTATAAACAAAAAA CGGAAAT AAAATG ATTTCCG TTTTTTGCATATTAT TERM 721 620527 - 620492 - f 72 -9.3 -2.62184 | opp_overlap 620485 GTTTTTTGCATATTA TTTTAGATTTGACTA TGATAT TTGTCAAATCTAAAA AGAGGTGATATATTG SMU.661 620728 - 620973 + | putative transcriptional regulator SMU.662 621118 - 621807 + | hypothetical protein TERM 722 621833 - 621855 + F 100 -10 -4.91084 | opp_overlap 621833 TTATCATGAGTTAAA GTATCTAGTT ATA AACTAGGTAC TTTTTACATTTTATT TERM 723 621855 - 621833 - f 73 -7.8 -3.69323 | opp_overlap 621833 TTATCATGAGTTAAA GTATCTAGTT ATA AACTAGGTAC TTTTTACATTTTATT argC 621942 - 622964 + | N-acetyl-gamma-glutamyl-phosphate reductase TERM 724 623147 - 623176 + G 74 -9.3 -3.12803 | gap 1, opp_overlap 623146 623145 ATTGATGGAAATATT GCCAGTCCGCTAGG TTT CTCAGCGGA-TGGC TTACATGCTGGTTTT argJ 623123 - 624316 + | bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein argB 624345 - 625082 + | acetylglutamate kinase TERM 725 625546 - 625525 - g 86 -10.2 -4.25848 | AAGCGGCTATTAAAA TTGCCCGT AAAGCA ACGGGCAA GCAAGAGATTATTAC TERM 726 626217 - 626191 - g 73 -8.1 -3.67792 | gap 1, opp_overlap 626201, overlap 626194 626196 TGATAGGTATTGAAA CGA-CAGCTGAC CTTG GTCAGCTGGTCA AGGCTACTCGCGACC TERM 727 626213 - 626194 - g 87 -12.2 -2.9462 | opp_overlap 626201, overlap 626191 626196 TAGGTATTGAAACGA CAGCTGAC CTTG GTCAGCTG GTCAAGGCTACTCGC argD 625218 - 626357 + | acetylornithine aminotransferase nrdF 627440 - 626481 - | ribonucleotide-diphosphate reductase subunit beta TERM 728 627539 - 627562 + r 85 -10.4 -3.56568 | gap 1 GTGTTTTGTTGCTTA TTCTCGAGACC TCA GG-CTCGAGAA TTTCCCAGATAATTG TERM 729 627766 - 627754 - R 74 -9.1 -3.01712 | GTTGTGGTGTTAAGA GCGGT GTA ACCGC TCGAGGAAGTTCAAA TERM 730 627798 - 627775 - R 100 -14 -3.14881 | opp_overlap 627775 TAACCGCTCGAGGAA GTTCAAAGCC TTTA GGCTTTGAAC TTAGTCATGGAACGA TERM 731 627775 - 627798 + r 100 -14 -3.21099 | opp_overlap 627775 TAACCGCTCGAGGAA GTTCAAAGCC TTTA GGCTTTGAAC TTAGTCATGGAACGA TERM 732 627952 - 627988 + r 88 -11.8 -2.8499 | gap 1, opp_overlap 627925 627961, overlap 627949 CCATTAGCGATTGCC GTGTAAGGATTAGGAGC TTTA GCTCC-AATCCTTACAA TCCTTACTGTTCAGT SMU.668c 630162 - 628003 - | ribonucleotide-diphosphate reductase subunit alpha TERM 733 630067 - 630049 - G 71 -8.2 -3.54129 | opp_overlap 630042 630042 630049, overlap 630053 GACATTTTCTTTAAA GAAAGCTT CTA AAGCTTCC TTATCCTTATGAAGT TERM 734 630224 - 630194 - R 78 -9 -3.48593 | opp_overlap 630194 630198, overlap 630197 TATTCTTTGACATAA GAAGGGGGTTGGAA ATT TCCCAACCTCTTTC TTTAAAATATAGTGA TERM 735 630194 - 630224 + r 89 -11.2 -3.64599 | opp_overlap 630194 630197, overlap 630198 TATTCTTTGACATAA GAAGGGGGTTGGAA ATT TCCCAACCTCTTTC TTTAAAATATAGTGA TERM 736 630198 - 630220 + r 85 -8.4 -4.45117 | opp_overlap 630197 630194, overlap 630194 CTTTGACATAAGAAG GGGGTTGGAA ATT TCCCAACCTC TTTCTTTAAAATATA SMU.669c 630586 - 630362 - | putative glutaredoxin TERM 737 630540 - 630554 + g 70 -5 -4.61482 | overlap 630541 AACTTCTTAGTCATT TTGCAT TGC ATGCAG TTATTTTTTGAAAAA citB 630841 - 633507 + | aconitate hydratase citZ 633512 - 634630 + | methylcitrate synthase idh 634632 - 635813 + | isocitrate dehydrogenase TERM 738 636109 - 636082 - f 100 -17.2 -4.36914 | TCCGCCGTGATAAAA GTGCCTGAAACT TTAA AGTTTCAGGCAC TCGGAAGGTTTGAGA TERM 739 636332 - 636317 - f 71 -7.6 -3.48593 | CAGGTTGGGACATAA GGAAAC GAAA GTTTCC TCATCGCTACCGTCC TERM 740 636589 - 636571 - g 73 -6.8 -4.2558 | opp_overlap 636558 636571 TACTGTTCATTAAAA GATAAACA GTT TGTCTATC GTGGATTTTTAGCAG TERM 741 636632 - 636643 + G 72 -2.2 -5.26119 | CTGTTTATGGTTTTG CGGT AACA ACTG TTTTGTTTTTGACGA SMU.673 636481 - 637278 + | hypothetical protein ptsH 637444 - 637707 + | phosphocarrier protein HPr TERM 742 637874 - 637835 - g 71 -9.4 -2.61306 | gap 1, opp_overlap 637835, overlap 637834 637832 ACACAAGCAGAAGAG GCTCGTTTGGATGCAGCTC TAG AAGCTTC-TCAAAACGAGC TTTCTCTTATCCGCC TERM 743 637835 - 637874 + G 83 -8.7 -4.27117 | gap 1, opp_overlap 637834 637832 637835 ACACAAGCAGAAGAG GCTCGTTTGGATGCAGCT CTAGA AGCTTC-TCAAAACGAGC TTTCTCTTATCCGCC SMU.675 637712 - 639445 + | phosphoenolpyruvate:sugar phosphotransferase system enzyme I, PTS system EI component gapN 639675 - 641102 + | NADP-dependent glyceraldehyde-3-phosphate dehydrogenase TERM 744 641163 - 641186 + F 100 -11 -5.18726 | GAGTTCAGTATGTGA GGCTGGAACA AAAG TGCTCCAGCC TTTTTATTGTACAGG TERM 745 641346 - 641307 - f 76 -8.8 -3.53012 | gap 1, opp_overlap 641312, overlap 641291 641289 641288 641312 CCTTTGCTTTGCAAA TGAT-AGCTCCAATTGTTT GGG AAACAGTTGGAGCTTATCT AAGCTCATGAGGTCA TERM 746 641340 - 641312 - f 100 -13.3 -3.00525 | opp_overlap 641312, overlap 641307 GCTTTGCAAATGATA GCTCCAATTGTTT GGG AAACAGTTGGAGC TTATCTAAGCTCATG TERM 747 641312 - 641340 + F 100 -15.5 -3.50869 | opp_overlap 641307 641312 GCTTTGCAAATGATA GCTCCAATTGTTT GGG AAACAGTTGGAGC TTATCTAAGCTCATG TERM 748 641630 - 641610 - f 75 -4.8 -4.99638 | gap 1, opp_overlap 641615 ATATGTATAGAAAAA GCAGACTTG TCTT CAAGT-TGC TAAGGGGTTATTATA SMU.677 641773 - 642165 + | MerR family transcriptional regulator TERM 749 642201 - 642211 + G 72 -5.4 -4.60746 | AATGGTGTGAAAATG CCTA TCT TAGG TTTTGGTGTTTTTCA SMU.678 642165 - 643007 + | oxidoreductase TERM 750 643664 - 643654 - g 78 -5.4 -5.14563 | GCGCTCATCAAAAAA CTGT TGG ACAG ATCATGTTGCGCTGG SMU.679 643017 - 643883 + | oxidoreductase TERM 751 644191 - 644210 + G 75 -6.4 -4.4261 | CGCTTTCTATGTCGG CTGGCCAA AAGC TTGGGCAG TTTTCATCTTAGCCA SMU.680 643925 - 644263 + | putative gamma-carboxymuconolactone decarboxylase subunit SMU.681 644674 - 644859 + | hypothetical protein TERM 752 647261 - 647241 - g 70 -4.8 -4.67942 | overlap 647235 TCTAATAAACTAAAA GATAACCT TTCAG AAGTTATC GGGGCTGCTGAAGCT SMU.682 645162 - 647720 + | hypothetical protein TERM 753 650858 - 650844 - g 70 -8.6 -3.06261 | overlap 650846 TCTCAATTGGGAATA GACAGT TTG ACTGTC CGCAGAATTTTAGAC SMU.683 647736 - 651149 + | putative ATP-binding protein TERM 754 651186 - 651174 - g 80 -7.7 -4.49756 | TTTGAAACACTAAAA CACTC AGG GAGTG AAACCAAAGTAAGCA SMU.684 651153 - 651842 + | hypothetical protein SMU.685 651839 - 652240 + | hypothetical protein SMU.687c 652832 - 652698 - | hypothetical protein TERM 755 652742 - 652754 + g 81 -3.4 -5.56673 | overlap 652733 GATAACTATTTTTTA TCAG AAATA CTGA TTTTTTATTCTGAAT SMU.688 652915 - 653412 + | hypothetical protein TERM 756 653409 - 653427 + F 74 -6.8 -4.22009 | ACAAGAAAGGCTGGC TTAAGAGT AAA ACTCTTGA TTTCTATTGAGTAAT TERM 757 653986 - 653963 - g 79 -8.2 -4.06055 | overlap 653943 653968 ACCTGCCAAAGCAAA TGAGACTGAA ACAG TTCCGTCTCA GGCAAGTACTGCTAG TERM 758 654909 - 654897 - g 75 -7.7 -4.1891 | opp_overlap 654897 TGGTCTGAAGATAAA GGTCA AGA TGACC TTAAGTGGTATTCAC SMU.689 653658 - 656597 + | hypothetical protein SMU.690 656618 - 657205 + | hypothetical protein pepT 657298 - 658518 + | peptidase T SMU.692 658574 - 659059 + | hypothetical protein TERM 759 659068 - 659047 - T 100 -6.6 -6.28401 | opp_overlap 659047 TAAAAAAGAAAAAAA GCCCTTAC GGTAAT GTAAGAGC TTTTGTTGGACAATT SMU.694c 659245 - 659051 - | putative ferredoxin [4Fe-4S] TERM 760 659334 - 659318 - g 73 -3.7 -5.08601 | CCATGGGAAGAAAAA GTAACTG ATG CAACTAC TGATAATGAAGAAAT SMU.695 659291 - 659773 + | hypothetical protein cmk 659784 - 660467 + | cytidylate kinase TERM 761 660581 - 660602 + F 100 -8.7 -5.69262 | AATATTATGTGTATA CGGGCTTGA TTTG TCAGGTCCG TTTTTGTTTTTCTCA infC 660634 - 661164 + | translation initiation factor IF-3 rpmI 661199 - 661399 + | 50S ribosomal protein L35 rplT 661444 - 661803 + | 50S ribosomal protein L20 TERM 762 661900 - 661927 + T 100 -10 -5.2189 | opp_overlap 661900 TTTCGCAATAAAAAA CATCTGAAAACT AGTT AGTCTTCAGATG TTTTTTGATGCTTGA TERM 763 661927 - 661900 - T 100 -12.2 -5.4505 | opp_overlap 661900 TTTCGCAATAAAAAA CATCTGAAAACT AGTT AGTCTTCAGATG TTTTTTGATGCTTGA SMU.700c 662636 - 662010 - | putative phosphoglycerate mutase-like protein SMU.701c 663012 - 662644 - | hypothetical protein TERM 764 662695 - 662682 - G 91 -8.1 -5.1166 | opp_overlap 662681 662686 TACCAAAAGGAAAAA GGCTG ATGC CAGCC ATCTTGATAGACTGT SMU.702c 663490 - 663017 - | putative transcriptional regulator SMU.703c 664329 - 663487 - | hypothetical protein TERM 765 663909 - 663895 - G 84 -8.6 -4.49316 | ACCAGCAAGAATAAA GCTAAC AAA GTTAGC AGGAATTGTCCCAAT SMU.704c 665356 - 664373 - | putative autolysin; amidase SMU.706c 666060 - 665446 - | hypothetical protein TERM 766 666048 - 666022 - G 85 -5.8 -5.4251 | opp_overlap 666039, overlap 666025 TTTAGACATAAAAAA GACCTCCTTGTA CAA TCCAAGGAGTCC ATGTGTGTTCATTTA SMU.707c 667065 - 666217 - | putative endolysin TERM 767 666941 - 666954 + g 71 -8.1 -3.43826 | opp_overlap 666940, overlap 666940 TCTGTAGCAGGAATG GCTGC TTGG GCAGC TCTTAATTCTTTTTG SMU.709 667339 - 667863 + | hypothetical protein SMU.711 667847 - 668236 + | hypothetical protein TERM 768 668227 - 668252 + F 90 -4.9 -5.80817 | gap 1, opp_overlap 668230 668233, overlap 668230 GAAAGTTTATAAAGG TAA-GAACTAGG CTG TCTAGTTCTTTA TTTTTTTGTGTTAAA TERM 769 668230 - 668248 + F 93 -8.2 -5.29742 | opp_overlap 668230 668233, overlap 668227 AGTTTATAAAGGTAA GAACTAGG CTG TCTAGTTC TTTATTTTTTTGTGT capP 668354 - 671077 + | phosphoenolpyruvate carboxylase ftsW 671372 - 672649 + | putative cell division protein FtsW tuf 672868 - 674064 + | elongation factor Tu TERM 770 674116 - 674129 + F 83 -4.5 -5.69068 | opp_overlap 674116 AATAATTGTAAAAGA GTCTC GAAA GAGGC TTTTTTCTATTTTTA TERM 771 674621 - 674595 - g 78 -9.5 -3.55444 | opp_overlap 674594 674598 674612 674612, overlap 674598 CTTTTACTGGTGAAA CAAGTCCTGCA GCGCT TGCAGCACTTG GTGTTGACTATGTTA tpiA 674360 - 675118 + | triosephosphate isomerase TERM 772 675190 - 675246 + T 100 -14.2 -2.97747 | gap 1, opp_overlap 675207, overlap 675207 AACCTGCAAGAAATT CATTTCATACTTAAAAACACTGCTGAT AAAA ATCAGCAGTGTTTTTTGGTAT-AACTG TCTATCATATCAAAA TERM 773 675207 - 675230 + T 100 -14 -5.22312 | opp_overlap 675207, overlap 675190 TTTCATACTTAAAAA CACTGCTGAT AAAA ATCAGCAGTG TTTTTTGGTATAACT TERM 774 675230 - 675207 - T 100 -14 -4.70659 | opp_overlap 675207 675190 TTTCATACTTAAAAA CACTGCTGAT AAAA ATCAGCAGTG TTTTTTGGTATAACT TERM 775 675280 - 675265 - T 85 -4.7 -5.59357 | opp_overlap 675265 675274 ATCATATCAAAAAAA CACCT GATTGA AGGTG CTTCTTTTAGACTGA murN 676560 - 675328 - | putative peptidoglycan branched peptide synthesis protein; alanine adding enzyme; beta-lactam resistance factor MurN TERM 776 675784 - 675804 + g 81 -6.9 -4.7261 | opp_overlap 675788, overlap 675778 CAAATCGGCTTGCAA CTTAGCAAT TTT ATTGCCAAG TTTATTTTGATCCCT TERM 777 676009 - 676023 + g 90 -6.4 -5.52384 | CCGACGAAGTTTAGT GCCGAA AGT TTTGGC TTTTTTTACTAAAGG murM 677777 - 676563 - | putative peptidoglycan branched peptide synthesis protein MurM SMU.718c 678586 - 677777 - | hypothetical protein SMU.719c 680138 - 678834 - | hypothetical protein TERM 778 679317 - 679329 + g 75 -7.7 -4.07568 | ACTAAGATAGTCTTC TAGGG TAA CCCTA TTTTCAAAAAAAGGG TERM 779 679559 - 679571 + g 70 -9.1 -3.09803 | opp_overlap 679556 679559 CAATTGGACGAATGA CGCGT AAG ACGCG TGTTAAATCAAATTC TERM 780 680195 - 680206 + H 71 -3 -5.19879 | opp_overlap 680195 GAAAGTATGTAAACA GAAA AAAA TTTC TTTTTGTATTTACGG SMU.720 680250 - 681128 + | Na+/solute symporter SMU.721 681190 - 681582 + | hypothetical protein TERM 781 681664 - 681651 - f 85 -2.4 -6.22802 | opp_overlap 681651 GGTTATAAAAAAAAA CACT TTTATG AGTG GTTTTACCATGACTC SMU.722 681658 - 681837 + | hypothetical protein TERM 782 681925 - 681949 + F 100 -10.9 -5.45802 | opp_overlap 681922 681946 CATATTAAATAGCGA GACTTGTTTAA TTA TTAAACAGGTC TTTTTCTTTTAAAGA TERM 783 682039 - 682003 - g 100 -9.5 -6.04324 | opp_overlap 682004, overlap 682004 TCAAAAAACAAAAAA GGGACAGTTTTTACGTC CAA GATGAAAAAACTGTCCT ATCTGGCCTAGAATC TERM 784 682004 - 682038 + G 100 -15.2 -2.89683 | opp_overlap 682003 682004 CAAAAAACAAAAAAG GGACAGTTTTTACGTC CAA GATGAAAAAACTGTCC TATCTGGCCTAGAAT TERM 785 682038 - 682004 - g 100 -13 -4.18934 | opp_overlap 682004, overlap 682003 CAAAAAACAAAAAAG GGACAGTTTTTACGTC CAA GATGAAAAAACTGTCC TATCTGGCCTAGAAT SMU.723 681984 - 684665 + | putative calcium-transporting ATPase; P-type ATPase TERM 786 684675 - 684698 + F 77 -3.9 -5.4588 | opp_overlap 684675, overlap 684666 ATTTAATAGAAAAAA TGACTGG TATTGAAACT CCAGTCA TTTTTTATGATTTTG TERM 787 684698 - 684675 - f 86 -6 -5.48063 | opp_overlap 684675 684666 ATTTAATAGAAAAAA TGACTGGTAT TGAA ACTCCAGTCA TTTTTTATGATTTTG SMU.724 684778 - 685518 + | putative glycerophosphoryl diester phosphodiesterase TERM 788 685669 - 685637 - T 100 -18.1 -3.18264 | opp_overlap 685637 TGGTTGATTTATGAA TAGTTTCAACAGTTT GAA AAACTGTTGAAACTA TTATTTGCAGGACAA TERM 789 685637 - 685669 + T 100 -18.1 -3.90744 | opp_overlap 685637 TGGTTGATTTATGAA TAGTTTCAACAGTTT GAA AAACTGTTGAAACTA TTATTTGCAGGACAA SMU.725c 686740 - 685823 - | hypothetical protein SMU.727 686922 - 687305 + | putative transcriptional regulator SMU.728 687292 - 688176 + | putative oxidoreductase TERM 790 688196 - 688179 - f 82 -9.9 -3.30124 | opp_overlap 688179, overlap 688182 GCTCATTTTCTAGAA GAAGCCT TTAT AGGCTTC TTTTTTTGGTATTTT TERM 791 688179 - 688196 + F 100 -9.9 -5.69023 | opp_overlap 688179 688182 GCTCATTTTCTAGAA GAAGCCT TTAT AGGCTTC TTTTTTTGGTATTTT SMU.730 688445 - 688657 + | hypothetical protein TERM 792 688957 - 688941 - g 71 -3.7 -5.00027 | opp_overlap 688941 AGGAAAAAGATAAAA GAAATTG TGG CAATTAC TCGTGTTTTCTATAA TERM 793 689343 - 689329 - g 71 -4.2 -4.6951 | overlap 689331 ATTACGCAAAAGAAA TAGGTG GTA CACCGA CACTTGAAGATATTA SMU.731 688659 - 689393 + | putative ABC transporter, ATP-binding protein TERM 794 689614 - 689627 + G 73 -3.9 -5.10665 | AGACGTAGTTACAGC CAAAT ATCT ATTTG TTTTGTTTATTGAAT SMU.732 689393 - 690043 + | hypothetical protein SMU.734 690257 - 690682 + | hypothetical protein SMU.735 690868 - 691317 + | hypothetical protein SMU.737 691383 - 692591 + | hypothetical protein TERM 795 692598 - 692586 - f 88 -6.3 -5.45652 | overlap 692596 ATTTTTAAGAAAAAA GACTA ATC TAGTC TCGTCAGGGACAAAT SMU.738 692912 - 693046 + | hypothetical protein TERM 796 693088 - 693060 - T 90 -9.6 -4.21462 | opp_overlap 693060 AGGTATCAGTCAAAA CGAGGTTAGGAC AAGAA GTGCCAACCTCG TTAGATAAAACAATG SMU.739c 694746 - 693190 - | hypothetical protein TERM 797 693391 - 693405 + g 72 -7.1 -3.88985 | TGAAGAGATGACGCT GACGG TTTTT CCGTC TTTATCAACAATTTT SMU.741 695056 - 696114 + | hypothetical protein SMU.742 696178 - 697008 + | hypothetical protein SMU.743 697005 - 697826 + | hypothetical protein TERM 798 697943 - 697929 - g 100 -11.4 -4.84914 | AGTTACACAAGAAAA GCCAGC ACT GCTGGC AGAAACTGCTGAAAC TERM 799 697963 - 697949 - g 81 -10 -3.86015 | opp_overlap 697949, overlap 697958 697960 CACTGCTGGCAGAAA CTGCTG AAA CAGCAG AGAGTCAGCAGTCTG TERM 800 698300 - 698284 - g 88 -8.7 -4.81249 | overlap 698285 698294 GTGGAAAGCCAAAAA CCAGCAG AGA CTGCTGA GCAAGAAAGCCAAAC TERM 801 698299 - 698285 - g 79 -10 -3.48026 | overlap 698284 698294 TGGAAAGCCAAAAAC CAGCAG AGA CTGCTG AGCAAGAAAGCCAAA TERM 802 698459 - 698438 - g 82 -5.1 -5.42259 | GCAGTCTGAAAAAAA CCCGCAC TGGCTTTG GTGCGAG ACTTAATGCTTTCTT ftsY 697828 - 699324 + | putative cell division protein FtsY; signal recognition particle (docking protein) lmrB 700765 - 699401 - | putative drug-export protein; multidrug resistance protein TERM 803 699586 - 699597 + g 72 -2.2 -5.2853 | TTTGGAAAATAGCAG TAGC ATCC GCTG TTTTATTTTTGGGTA TERM 804 700161 - 700149 - G 73 -2.7 -5.27476 | overlap 700150 GCTAATAAAAGAAAA CTGAT GAA ATCAA AGGGACGTTTACTAG TERM 805 700854 - 700808 - R 88 -6.1 -5.47159 | TTGTAACACAAAAAA GAAGTACAACAAAGCTGATTT TTTAG AAATGAACCTTGTTAGACTTC TTTTAATTGAGATAT SMU.746c 701690 - 700875 - | hypothetical protein SMU.747c 702592 - 701687 - | putative permease TERM 806 702574 - 702544 - GH 71 -7.6 -3.41709 | opp_overlap 702556 TAATAGAAAGGAAGA TTGCCAAGCATTGC AGA ACACTGCTTGGTAA ATGATTAAAAATCGC SMU.748 702575 - 702751 + | hypothetical protein TERM 807 702793 - 702780 - TR 72 -2.4 -5.50499 | opp_overlap 702780 TCAGATTGAAAAAAA GTCT TTTTTG AGAC TTTTTAACCTTAAAC SMU.750c 703579 - 703472 - | hypothetical protein TERM 808 704295 - 704285 - g 72 -5.4 -4.64334 | AAGCGGCGAACAAAA GCAA CAA TTGC TCGTGAAAATGGACT SMU.751 703952 - 706078 + | transcriptional accessory protein SMU.752 706065 - 706502 + | hypothetical protein TERM 809 706493 - 706508 + F 76 -5.4 -4.97957 | opp_overlap 706493 706488, overlap 706488 ATTAAGACATCAAAA TCAGTC GTAA GGCTGA TTTTATTCTTCTCTA SMU.753 706590 - 706889 + | hypothetical protein TERM 810 706997 - 707017 + F 77 -4 -5.45802 | opp_overlap 706997 CCTAATAGTTTGAAA GACAAGTT AGTAA ATCTTGTC TTTTTCTTTTAAAGC TERM 811 707335 - 707319 - g 86 -8.1 -4.64861 | overlap 707328 CTGTTTTAAAAGAAA TGTTTCA AAC TGAAACA CCAGCCATTATCGTT SMU.754 707087 - 708022 + | HPr kinase/phosphorylase TERM 812 708189 - 708201 + G 70 -4.8 -4.53119 | TTTCCTTTAGCCATT GTCG GTGCA CGAC TTTATTATGTTATTT SMU.755 708015 - 708794 + | prolipoprotein diacylglyceryl transferase SMU.756 708823 - 709218 + | hypothetical protein TERM 813 709263 - 709273 + G 75 -6.8 -4.38141 | overlap 709260 GGAGCGGTATCAGGA GCTG CTG CAGC TTATTTTCTCTCAAC SMU.757 709218 - 709673 + | hypothetical protein TERM 814 709763 - 709752 - T 95 -5.8 -5.7946 | opp_overlap 709752 TTGGCAAGAAAAAAA CTCC CTTA GGAG TTAATAGTTAATGTT SMU.758c 710058 - 709771 - | hypothetical protein TERM 815 709926 - 709916 - G 81 -5.4 -5.28176 | GTTACGCAGAAAAAA GCTA ATT TAGC AAAAAAGATGAGTTC TERM 816 709944 - 709933 - G 79 -4.4 -5.18357 | opp_overlap 709933 TAATTTAGCAAAAAA GATG AGTT CATC TAGCTTTGTTCTATT TERM 817 710117 - 710127 + H 77 -4 -5.37171 | overlap 710123 AAAAGTTTGTCATTA GTTT TTG AAAC TTTTTCTTTGATATT TERM 818 711060 - 711075 + G 73 -4 -5.06414 | CCAGGACATAATTTT GTTGAG ATTG TTCAAC TTTTTGTTAAAGCAA SMU.759 710298 - 711224 + | putative protease TERM 819 711338 - 711394 + F 90 -8.3 -4.8543 | opp_overlap 711348, overlap 711339 711340 ACGGTAATTACCTGC GTTTATGAGAGTGGGACAAAAGT TCTGCCTTTTT GATTTTGTCCCACTCTCATAAGG TTTTTCTAGGGATTG TERM 820 711339 - 711393 + F 91 -11.8 -3.50535 | opp_overlap 711348, overlap 711338 711340 CGGTAATTACCTGCG TTTATGAGAGTGGGACAAAAGT TCTGCCTTTTT GATTTTGTCCCACTCTCATAAG GTTTTTCTAGGGATT TERM 821 711340 - 711392 + F 100 -13.1 -2.69598 | opp_overlap 711348, overlap 711339 711338 GGTAATTACCTGCGT TTATGAGAGTGGGACAAAAGT TCTGCCTTTTT GATTTTGTCCCACTCTCATAA GGTTTTTCTAGGGAT SMU.761 711496 - 712782 + | putative protease TERM 822 712783 - 712802 + F 95 -8.6 -5.22137 | opp_overlap 712778 712783 ACTGTTAGAACTTAA GAGTATGG GAAA CCATGCTC TTTTGTTTTATGCTT ahpC 712912 - 713472 + | alkyl hydroperoxide reductase SMU.765 713482 - 715014 + | NADH oxidase/alkyl hydroperoxidase reductase peroxide-forming TERM 823 715036 - 715076 + F 100 -17.2 -5.19328 | opp_overlap 715033 GGACTTATTGAACTG CACCCCAAAAGTTAGA CAGAAAAAA TCTAACTTTTGGGGTG TTTTTATTATGAAAT SMU.766 715085 - 715603 + | hypothetical protein TERM 824 715592 - 715580 - f 79 -4.8 -5.31855 | GAGCAAGAAGAAAAA CGGA AATTG TCCG AGGATTGGTAACGGA TERM 825 716424 - 716392 - g 91 -10.7 -4.69549 | opp_overlap 716392 AAGGTAAAACTAAAA GGACTTAGTCCTGTA CAG TACAGAACGAAATCC TTTACTTAAATTTTT SMU.767 715597 - 716433 + | putative transposase, ISSmu1 SMU.768c 716797 - 716480 - | hypothetical protein SMU.769 716931 - 717143 + | hypothetical protein SMU.770c 718673 - 717333 - | putative manganese transporter SMU.771c 719347 - 719213 - | hypothetical protein TERM 826 719466 - 719480 + H 74 -4.2 -5.31275 | opp_overlap 719458 AAATAGATTCAGATT GAAGAC AAA GTCCTC TTTTTTATCATGACG TERM 827 719835 - 719810 - g 70 -2.7 -5.0925 | opp_overlap 719812 719813 719824, overlap 719812 719813 TTTGAAAAGCAAAAA CACTTTAGTTT ACGT AAACTAAAATT TGGTTTAGTTTCAGT TERM 828 721612 - 721628 + G 74 -9.5 -3.14344 | opp_overlap 721611 721610 GAAAGCTCTGAAAGG TCAACCA ATG TGGTTGA TTCATACACGAACTG gbpD 719789 - 721969 + | putative glucan-binding protein D; BglB-like protein TERM 829 722010 - 721978 - T 77 -9.3 -3.27992 | opp_overlap 721983, overlap 721983 AAGGTAATAATAAAC GAAAACGCTAGAATA ACT TGTTCTAGCGTTTTT TCTTAGATTTAAAAT TERM 830 722005 - 721983 - T 90 -9.2 -4.71708 | opp_overlap 721983, overlap 721978 AATAATAAACGAAAA CGCTAGAATA ACT TGTTCTAGCG TTTTTTCTTAGATTT TERM 831 721983 - 722005 + T 100 -11.4 -5.52096 | opp_overlap 721983 721978 AATAATAAACGAAAA CGCTAGAATA ACT TGTTCTAGCG TTTTTTCTTAGATTT TERM 832 722231 - 722211 - T 74 -5.6 -4.84353 | opp_overlap 722211 AGAAAGCAAAAGAAA TAAAATCA GATTT TGATTTTA ACTGAGTATTAAGTT TERM 833 722316 - 722285 - T 95 -8.8 -5.02606 | overlap 722286 722288 TATTAAAGAATAAAA CGACTCCTATTGGA TAAT TCCAATAGGAGCTA ATAACGATCTATAAG TERM 834 722314 - 722286 - T 89 -11.2 -3.59937 | gap 1, overlap 722285 722288 ATTAAAGAATAAAAC GACTCCTATTGGA TAAT TCCAATAGGAG-C TAATAACGATCTATA TERM 835 722313 - 722288 - T 100 -14.9 -3.35275 | overlap 722286 722285 TAAAGAATAAAACGA CTCCTATTGGA TAAT TCCAATAGGAG CTAATAACGATCTAT lysS 723844 - 722354 - | lysyl-tRNA synthetase TERM 836 724320 - 724334 + G 70 -8.6 -3.16202 | overlap 724317 724333 ATACAGAATTGCCGT GGGAAA GTG TTTCCC TGATTTTGATATGGC SMU.774 724249 - 725151 + | hypothetical protein TERM 837 725279 - 725318 + T 100 -15.3 -5.05505 | gap 1, opp_overlap 725279 TGAGACAATATATAA GGCAATCGTGTGTGGCTT GGCGG AAGC-ACATACGATTGCC TTTTTCGTTTCTCAT TERM 838 725318 - 725279 - T 100 -13.1 -3.74975 | gap 1, opp_overlap 725279 TGAGACAATATATAA GGCAATCGTGTGTGGCTT GGCGG AAGC-ACATACGATTGCC TTTTTCGTTTCTCAT SMU.775c 727610 - 725457 - | integral membrane protein TERM 839 725895 - 725879 - G 72 -9.5 -2.84878 | opp_overlap 725882, overlap 725878 CTTCGGAACGGAAAG CAACAAG CTG CTTGTTG TTAGGAGACAGTAAA TERM 840 727256 - 727237 - G 79 -8.6 -4.1673 | CAAGGTCTCAATAAA TTAAGGGC AGAA GCCCCTAA ACCAGCAGAAGTCTT TERM 841 727842 - 727815 - g 90 -13 -2.87136 | opp_overlap 727813 727812, overlap 727817 TTATTAAGTAGCAGA GATTATCCAAAT TTAA ATTTGGATAATC AAGTTGTTCAATTAT TERM 842 727840 - 727817 - g 75 -9.8 -2.98282 | opp_overlap 727813 727812, overlap 727815 ATTAAGTAGCAGAGA TTATCCAAAT TTAA ATTTGGATAA TCAAGTTGTTCAATT SMU.776 727743 - 728900 + | hypothetical protein aroD 728907 - 729584 + | 3-dehydroquinate dehydratase TERM 843 729754 - 729738 - g 73 -3.8 -5.10029 | opp_overlap 729738 AGTAACTTTAAAAAA TATCAT GCGTT ATGATA TGTTTGGCATTAACA aroE 729574 - 730443 + | shikimate 5-dehydrogenase aroB 730457 - 731524 + | 3-dehydroquinate synthase aroC 731526 - 732692 + | chorismate synthase TERM 844 732780 - 732769 - g 76 -3 -5.49234 | ATATGGAAGAAAAAA CAAT TTAT ATTG CAGGACTAGGACTAA TERM 845 732997 - 732985 - g 72 -4.9 -4.8487 | opp_overlap 732989, overlap 732989 CTATTAAAAAAACAA TTGAT TTT ATCAA AATTTTAGCAGATTT TERM 846 733232 - 733246 + G 81 -10 -3.80535 | opp_overlap 733231, overlap 733230 TAAACCTAATACTAT TCCTGC CTT GCAGGA TCTTTTATCAGGCTT SMU.781 732756 - 733862 + | prephenate dehydrogenase SMU.782 733873 - 734214 + | hypothetical protein TERM 847 734258 - 734294 + F 100 -12.5 -4.83615 | TTTAGGAAAATTTCA GAGCTTAGGGAAACG TTTGTTT CGTTTTTCTAAGCTC TTTTTGTAAGCAATG aroA 734377 - 735660 + | 3-phosphoshikimate 1-carboxyvinyltransferase aroK 735653 - 736129 + | putative shikimate kinase TERM 848 736144 - 736157 + G 70 -5.9 -4.32436 | AAAATTGCTTATTTA GGGCC TAGC GGCTC TTTTACTCATAATGT pheA 736126 - 736950 + | prephenate dehydratase TERM 849 737359 - 737343 - g 75 -2.1 -5.34655 | overlap 737332 737345 CAAGGAAAAAGAAAA GATTCCG TTT CGGCAAC TAAGCCTAAAAAGCG SMU.787 736995 - 738383 + | putative transcriptional regulator TERM 850 738420 - 738398 - f 82 -7.7 -4.41716 | opp_overlap 738398 738396 738395 ATATGATATAATAAA GGAGTTGAG CATTT CTCAGCTCC TCATTTTTGTGAAAT TERM 851 738398 - 738420 + F 82 -9.9 -3.32317 | opp_overlap 738398, overlap 738396 738395 ATATGATATAATAAA GGAGTTGAG CATTT CTCAGCTCC TCATTTTTGTGAAAT SMU.788 738555 - 739910 + | putative RNA methyltransferase TERM 852 739960 - 739935 - f 71 -9.1 -2.52234 | opp_overlap 739940, overlap 739940 ACAAATCGTAGCAAT GAAAAGCCTTG AAAC CAAGGCTTTTT GCAGTGTAAAAGTGA TERM 853 739940 - 739955 + F 90 -9 -4.64766 | opp_overlap 739940 739935 TCGTAGCAATGAAAA GCCTTG AAAC CAAGGC TTTTTGCAGTGTAAA TERM 854 739955 - 739940 - f 89 -9 -4.45544 | opp_overlap 739940, overlap 739935 TCGTAGCAATGAAAA GCCTTG AAAC CAAGGC TTTTTGCAGTGTAAA TERM 855 740007 - 739985 - f 70 -6.3 -4.31692 | opp_overlap 739979 739977, overlap 739976 AAGTGAGCATTAAAA CCGTATAAC TATAC GCCATACGG TTTTAATATGTTCTC SMU.789 740430 - 741065 + | hypothetical protein TERM 856 741411 - 741394 - f 82 -9.9 -3.33151 | overlap 741388 741392 GGGTTTAAAGGAATA TTTCCCG TAGT CGGGAAA TGCTAAACTATGTCT SMU.790 741646 - 741885 + | hypothetical protein SMU.791c 742105 - 741866 - | hypothetical protein TERM 857 742220 - 742246 + H 71 -5.2 -4.59376 | opp_overlap 742231, overlap 742223 TTTTTAGCTATTGTG TCAGAAAGCAAT AAG AATGCTTTCTCA TTTTGATTTGCTGAT SMU.793 742327 - 742716 + | hypothetical protein TERM 858 743081 - 743060 - g 70 -2.9 -5.08824 | GGCTGATTTAAAAAA GGGCTATGT CTAT AGAAAGCCC AATGTCCCAATAGAA SMU.794 742803 - 743180 + | hypothetical protein SMU.795 743214 - 743621 + | esterase SMU.796 743711 - 744544 + | hypothetical protein SMU.797 744579 - 744797 + | hypothetical protein SMU.798c 745061 - 744933 - | hypothetical protein TERM 859 744988 - 744961 - G 100 -12.9 -4.36914 | opp_overlap 744953 744964 TTCTCCGTGATAAAA GTAGCAGAAAC GTTGAT GTTTCTGCTAC TTGGAAGATTTGAGA TERM 860 744964 - 744985 + g 72 -9.5 -2.72855 | opp_overlap 744961, overlap 744953 TCCGTGATAAAAGTA GCAGAAACG TTGA TGTTTCTGC TACTTGGAAGATTTG SMU.799c 745623 - 745261 - | hypothetical protein SMU.800 745834 - 746076 + | hypothetical protein TERM 861 746084 - 746095 + F 76 -3.6 -5.40474 | TTATTTAAAAGGGAA CGCT TACG GGCG TTTTTTTAAGCGAAT TERM 862 746495 - 746509 + G 72 -9.2 -2.85583 | overlap 746492 TGTAGCCCATGGTGG TCGCGG CGG CCGCGG TAATATTCGTTTTGC TERM 863 746625 - 746653 + G 70 -8.3 -3.23715 | overlap 746623 GCTGATGTTGGTTTA GTTGGTTTTCC TTCAGTT GGAAAATCAAC TCTTCTCAGCGTTAT obgE 746136 - 747440 + | GTPase ObgE SMU.802 747742 - 747924 + | hypothetical protein SMU.803c 749466 - 747961 - | putative ABC transporter, ATP-binding protein TERM 864 750705 - 750691 - g 70 -7.2 -3.86063 | ATAAAAAGTCAAGAA GAGTTT CAA AAACTC ATAGGTGAAATAAGA SMU.804 749791 - 751005 + | hypothetical protein TERM 865 751025 - 751061 + T 100 -15.5 -3.15544 | opp_overlap 751033, overlap 751033 TTCTCAGTTCCGACA GTTAAAAAGCAAGAC CGATAAT GTCTTGCTTTTTAAC TTAGTAAGGGTGCAA TERM 866 751033 - 751053 + T 83 -6.9 -4.7629 | opp_overlap 751033, overlap 751025 TCCGACAGTTAAAAA GCAAGAC CGATAAT GTCTTGC TTTTTAACTTAGTAA TERM 867 751053 - 751033 - T 79 -6.9 -4.70659 | opp_overlap 751033 751025 TCCGACAGTTAAAAA GCAAGAC CGATAAT GTCTTGC TTTTTAACTTAGTAA SMU.805c 752001 - 751261 - | putative amino acid ABC transporter, ATP-binding protein TERM 868 751596 - 751620 + g 71 -3.6 -4.8543 | overlap 751597 GGCTGTTAGGATAGG CTTGGGCTTT ATCCG AAAGTCCAAC TTTTTCTAGAAGTTC SMU.806c 754187 - 752001 - | putative glutamine ABC transporter, permease protein SMU.807 754378 - 755295 + | hypothetical protein TERM 869 755382 - 755431 + F 100 -17.5 -5.80951 | AGTTGACTGGTATGG GAGAGCTGCACAGAACTCT GTTTTATTTATA AGAGTTTTGTGCAGCTCTC TTTTTTCTTTTAGCT TERM 870 757302 - 757277 - g 75 -3.3 -5.243 | gap 1, overlap 757279 757282 CAAACCATCAAAAAA GATATCCGCGAT CTT ATCGCGATTA-C AAAAGCAAATGACTC TERM 871 757301 - 757279 - g 76 -7 -4.23218 | overlap 757277 757282 AACCATCAAAAAAGA TATCCGCGAT CTT ATCGCGATTA CAAAAGCAAATGACT uvrB 755492 - 757483 + | excinuclease ABC subunit B SMU.811 757851 - 758147 + | hypothetical protein SMU.812 758147 - 758260 + | hypothetical protein SMU.813 758451 - 759341 + | transcription regulator mutT 759399 - 759863 + | putative MutT-like protein SMU.815 759971 - 760786 + | putative amino acid transporter, amino acid-binding protein TERM 872 760866 - 760914 + F 100 -9.8 -4.87592 | gap 2, opp_overlap 760879, overlap 760868 760869 GCTAATGAGTTGGAT GCTGGGATAGACAGGCATGATTGC TGT GCAATT-TGCCTATTTGTCCC-GC TTTTATTATGTCTGA TERM 873 760868 - 760913 + F 84 -9.9 -3.5147 | gap 1, opp_overlap 760879, overlap 760866 760869 TAATGAGTTGGATGC TGGGATAGACAGGCATGATTGC TGT GCAATT-TGCCTATTTGTCCCG CTTTTATTATGTCTG TERM 874 760869 - 760912 + F 82 -11.2 -2.69798 | gap 1, opp_overlap 760879, overlap 760868 760866 AATGAGTTGGATGCT GGGATAGACAGGCATGATTGC TGT GCAATT-TGCCTATTTGTCCC GCTTTTATTATGTCT SMU.816 761002 - 762138 + | transaminase SMU.817 762171 - 762986 + | putative amino acid transporter, amino acid-binding protein TERM 875 763079 - 763106 + F 91 -8 -5.03715 | gap 1, opp_overlap 763082 763086, overlap 763082 763105 TTTATGAGAGAATAG CAA-GCAATAATT TTT AATTATTGCCTTG TTTTTTGAAAATAGT TERM 876 763082 - 763102 + F 82 -9.9 -3.36166 | opp_overlap 763082 763086, overlap 763079 ATGAGAGAATAGCAA GCAATAATT TTT AATTATTGC CTTGTTTTTTGAAAA TERM 877 763102 - 763082 - f 84 -9.9 -3.44844 | opp_overlap 763079 763082, overlap 763086 ATGAGAGAATAGCAA GCAATAATT TTT AATTATTGC CTTGTTTTTTGAAAA rpsU 763222 - 763398 + | 30S ribosomal protein S21 TERM 878 763437 - 763409 - T 89 -10.5 -3.82097 | opp_overlap 763417, overlap 763417 TCTAAAGTGATTAAA TAAAAAAACAGGT CTG ACCTGTTTTTTTG TTGGAAAATTCGAAT TERM 879 763429 - 763417 - T 100 -7.7 -5.99154 | opp_overlap 763417, overlap 763409 GATTAAATAAAAAAA CAGGT CTG ACCTG TTTTTTTGTTGGAAA TERM 880 763417 - 763429 + T 100 -7.7 -5.7946 | opp_overlap 763417 763409 GATTAAATAAAAAAA CAGGT CTG ACCTG TTTTTTTGTTGGAAA TERM 881 763501 - 763521 + T 74 -4 -5.18726 | opp_overlap 763501 GAATTCATAAAAAAA CAAACCTC AATAA GAAGTTTG TTTTTGTTCTACCAG TERM 882 763521 - 763501 - T 93 -6.2 -5.66684 | opp_overlap 763501 GAATTCATAAAAAAA CAAACCTC AATAA GAAGTTTG TTTTTGTTCTACCAG mscL 763939 - 763556 - | putative large conductance mechanosensitive channel SMU.820 764099 - 765619 + | hypothetical protein TERM 883 765678 - 765641 - f 89 -10.7 -3.8709 | opp_overlap 765641 AAAGGTTGTTATAAA GCACTTTCAGGTTAAGT TTAG ACTTTAACCGAAAGTGC TTTTTTGCCTATCAT TERM 884 765641 - 765678 + F 100 -10.2 -5.13473 | opp_overlap 765641 AAAGGTTGTTATAAA GCACTTTCAGGTT-AAGT TTAG ACTTTAACC-GAAAGTGC TTTTTTGCCTATCAT TERM 885 765877 - 765887 + G 71 -6.8 -4.07568 | overlap 765863 GGTCGTAATTATTTA GGAC TTT GTCC TTTTCACAAAGAAAA TERM 886 766174 - 766192 + G 70 -7.4 -3.86194 | opp_overlap 766178 ACAACGAAAGTTGGA GAAACTGC ACG GCAGTATC TTTATGAGAGAGGTT dnaG 765772 - 767550 + | DNA primase rpoD 767558 - 768673 + | RNA polymerase sigma factor RpoD SMU.823 768686 - 769021 + | hypothetical protein SMU.824 769338 - 770192 + | dTDP-4-keto-L-rhamnose reductase TERM 887 770211 - 770224 + F 100 -6.7 -5.79595 | opp_overlap 770211 TTTAGCAAAGAAGGA CAGGT TTAA ACCTG TTTTTTCTTTTCGCA rgpA 770365 - 771453 + | putative RgpAc; glycosyltransferase TERM 888 771797 - 771778 - g 76 -3.6 -5.26119 | opp_overlap 771778 771781, overlap 771781 TGTTGAAAAAGAAAA CAATCAAA TCCC TTTGATGG TTTATACAGATTTGA rgpB 771443 - 772378 + | rhamnosyltransferase rgpC 772378 - 773187 + | putative polysaccharide ABC transporter, permease protein rgpD 773187 - 774404 + | putative polysaccharide ABC transporter, ATP-binding protein rgpE 774427 - 775824 + | putative glycosyltransferase rgpF 775821 - 777572 + | RgpFc protein SMU.831 777569 - 780109 + | hypothetical protein SMU.832 780146 - 781462 + | hypothetical protein SMU.833 781479 - 782405 + | putative glycosyltransferase SMU.834 782537 - 783475 + | hypothetical protein TERM 889 784095 - 784105 + G 71 -4 -4.87389 | TTTATAAGACGTCGC GATA GAT TATC TTTGTTTTTACCGTG TERM 890 785204 - 785214 + G 76 -4 -5.31855 | overlap 785187 TCTATTACTAACAGG GATT CTA AATC TTTTTATTGTTAGTC SMU.835 783609 - 785420 + | hypothetical protein TERM 891 785438 - 785483 + F 70 -4.3 -4.76193 | gap 2, opp_overlap 785421 ATTATTTTACAACAA TAGAGTTTGTTCGATGATTGC ATCTTA GCG-TCATTGG-CAAACTCTA TTTTATATTGTGATT TERM 892 787066 - 787052 - g 76 -7.2 -4.21275 | TTAAGGGATTCAAAA TAGGAA CTG TTCCTA AAGTTGGTGCTATTG SMU.836 785626 - 787260 + | hypothetical protein SMU.837 787379 - 788221 + | putative reductase TERM 893 788227 - 788272 + F 100 -11.3 -5.09426 | gap 1, opp_overlap 788227 TGCCTTTTAAGAAAA CAGAACAGGCTTACCTGCTTGC TGG GCAA-TAGGTTAGCTTGCTCTG TTTTTTCAGATTAAA TERM 894 788272 - 788227 - f 90 -9.1 -4.63218 | gap 1, opp_overlap 788227 TGCCTTTTAAGAAAA CAGAACAGGCTTACCTGCTTGC TGG GCAAT-AGGTTAGCTTGCTCTG TTTTTTCAGATTAAA gshR 788354 - 789706 + | glutathione reductase TERM 895 789746 - 789713 - T 76 -9.7 -2.98942 | opp_overlap 789718, overlap 789718 ATGCGCTGATATATA TAAAAGACAAGGTTC ATTG GAGCCTTGTCTTTTC GATTAGGTGATTACG TERM 896 789741 - 789718 - T 93 -9.6 -4.64844 | opp_overlap 789718, overlap 789713 CTGATATATATAAAA GACAAGGTTC ATTG GAGCCTTGTC TTTTCGATTAGGTGA TERM 897 789718 - 789741 + T 100 -11.8 -4.28774 | opp_overlap 789713 789718 CTGATATATATAAAA GACAAGGTTC ATTG GAGCCTTGTC TTTTCGATTAGGTGA fol 790982 - 789726 - | putative folyl-polyglutamate synthetase TERM 898 791287 - 791312 + r 100 -13.4 -4.70626 | opp_overlap 791287 TTATGCAATAAAAAA GGTTGGGACA AAAAAG TGTCCCAACC TTTTTAAAATTATTG TERM 899 791312 - 791287 - R 100 -13.4 -5.4833 | opp_overlap 791287 TTATGCAATAAAAAA GGTTGGGACA AAAAAG TGTCCCAACC TTTTTAAAATTATTG SMU.840c 791768 - 791322 - | hypothetical protein TERM 900 791698 - 791713 + g 74 -9 -3.428 | overlap 791693 GTTTTGATATGTTCA GTCGGA CGTT TCCGAC TTGTCCCCTTTGTTT SMU.841 791892 - 793034 + | putative aminotransferase thiI 793149 - 794366 + | thiamine biosynthesis protein ThiI TERM 901 794444 - 794422 - f 70 -4.2 -5.00611 | opp_overlap 794422 794426, overlap 794418 CATAAATAAAAGAAA CATTGGAAAA ACA TCTTTCAATG TTTTTTCTTTCAATG TERM 902 794422 - 794444 + F 81 -4.2 -5.65927 | opp_overlap 794422 794418, overlap 794426 CATAAATAAAAGAAA CATTGGAAAA ACA TCTTTCAATG TTTTTTCTTTCAATG TERM 903 795270 - 795246 - g 80 -2.9 -5.5353 | CAGAGGAACAAAAAA CACTCTATCAT AAA ATGATCAAATG GGGAGCGGATGTCAT SMU.843 794504 - 795685 + | hypothetical protein TERM 904 796089 - 796077 - g 79 -7.7 -4.23156 | opp_overlap 796077 796076, overlap 796074 ATAGTGAACAAAGAA GACAG CGG CTGTC CTTTTATGAGCGCAA SMU.844 795716 - 796246 + | hypothetical protein SMU.845 796274 - 796861 + | hypothetical protein TERM 905 796935 - 796921 - Tf 71 -8.6 -2.82681 | TAAAAGTTGACTATA TGCACA TCC TGTGCA ACCGCACGAAAATCG SMU.847c 797376 - 796972 - | hypothetical protein rplU 797035 - 797349 + | 50S ribosomal protein L21 SMU.848 797361 - 797696 + | hypothetical protein rpmA 797718 - 798011 + | 50S ribosomal protein L27 TERM 906 798102 - 798124 + F 95 -5.7 -5.77571 | gap 1, opp_overlap 798102 GGCTTCAGTCTAAAA GGAGTTGAAA TCAT TTTCA-CTCC TTTTTCTTTTTTAGT TERM 907 798307 - 798271 - f 100 -14.9 -3.67976 | opp_overlap 798272 798281, overlap 798272 TCGATCAATCGTAAA CGATTATTAATCATTAT GCT ATAATGATTAATAATCA ATAGAAAGAGGTTCT TERM 908 798306 - 798272 - f 100 -16.2 -2.80464 | opp_overlap 798272 798281, overlap 798271 CGATCAATCGTAAAC GATTATTAATCATTAT GCT ATAATGATTAATAATC AATAGAAAGAGGTTC SMU.850 798325 - 799020 + | hypothetical protein SMU.851 799021 - 799512 + | hypothetical protein TERM 909 799895 - 799885 - f 79 -6.8 -4.57569 | GGATTGTGTCAAAAA GAGG AAT CCTC CTAGAATCTTAATGA TERM 910 800103 - 800119 + F 90 -5.1 -5.74122 | TTTCTTCAATCTGAA TCACGCG CAA TGTGTGA TTTTTTTGTATAATA SMU.852 800165 - 801070 + | putative transcriptional regulator; CpsY-like protein lspA 801079 - 801540 + | putative lipoprotein signal peptidase SMU.854 801530 - 802420 + | putative pseudouridylate synthase TERM 911 802913 - 802935 + G 80 -9.8 -3.5771 | TTGGGATTTCATATT GCTAGACGGT TTG GCCGTCCAGC TTTGGAGACATTTTT SMU.855 802622 - 803194 + | hypothetical protein TERM 912 803367 - 803384 + F 100 -6.3 -5.80727 | opp_overlap 803367 TTATATTTTGTGAAA TCTCCTT GTAT GAGGAGA TTTTTTCTTATTTTT pyrR 803417 - 803947 + | pyrimidine regulatory protein PyrR TERM 913 804895 - 804905 + G 79 -6.8 -4.77983 | overlap 804893 804902 TCTGTTTATGTTATT GCTG GAG CAGC TTTTCTTGCTGTCTT SMU.857 803944 - 805209 + | putative uracil permease pyrB 805214 - 806140 + | aspartate carbamoyltransferase catalytic subunit pyrA 806269 - 807357 + | carbamoyl phosphate synthase small subunit carB 807537 - 810716 + | carbamoyl phosphate synthase large subunit TERM 914 810750 - 810723 - f 77 -8.6 -3.59023 | opp_overlap 810729, overlap 810729 GCTATATAATCAGAA TAAAAAGATGGA GATA TCCATCTTTTTT GATGTAGGTAAGAGG TERM 915 810729 - 810744 + F 91 -7.6 -5.22312 | opp_overlap 810723 810729 TAATCAGAATAAAAA GATGGA GATA TCCATC TTTTTTGATGTAGGT TERM 916 810744 - 810729 - f 91 -7.6 -5.24416 | opp_overlap 810729, overlap 810723 TAATCAGAATAAAAA GATGGA GATA TCCATC TTTTTTGATGTAGGT TERM 917 810912 - 810951 + F 100 -18.4 -2.63479 | opp_overlap 810917 810924, overlap 810917 810924 CATTGTTCTTTATTA TTAAAGTTAAAACTTACA ATTT TGTAAGTTTTAACTTTAA TAATGTAAGGCTCTT TERM 918 810946 - 810917 - f 100 -13.9 -3.78775 | opp_overlap 810912 810917 810924, overlap 810924 TTCTTTATTATTAAA GTTAAAACTTACA ATTT TGTAAGTTTTAAC TTTAATAATGTAAGG TERM 919 810917 - 810946 + F 100 -13.9 -3.81951 | opp_overlap 810917 810924, overlap 810912 810924 TTCTTTATTATTAAA GTTAAAACTTACA ATTT TGTAAGTTTTAAC TTTAATAATGTAAGG TERM 920 810939 - 810924 - f 74 -6.2 -4.37711 | opp_overlap 810917 810912 810924, overlap 810917 TTATTAAAGTTAAAA CTTACA ATTT TGTAAG TTTTAACTTTAATAA TERM 921 810924 - 810939 + F 74 -6.2 -4.37711 | opp_overlap 810924 810917, overlap 810917 810912 TTATTAAAGTTAAAA CTTACA ATTT TGTAAG TTTTAACTTTAATAA TERM 922 811207 - 811164 - g 75 -8.4 -3.72695 | gap 1, overlap 811172 ATGTTGGTTATCAAA CAGTCAAAGTCAAAGAAGGAA CGA TTGCCTCTTCAACTTTG-CTG TCAGGAACTGTTAAG SMU.862 810983 - 812317 + | putative permease SMU.863 812323 - 813030 + | putative ABC transporter, ATP-binding protein TERM 923 813429 - 813417 - g 70 -4.9 -4.62904 | AAAGAGCTCTAAAAA TGTTA ATA TAACA GGAATTAACAGGACT SMU.864 813040 - 814284 + | putative ABC transporter, permease component TERM 924 814354 - 814387 + F 76 -5.4 -5.06451 | overlap 814357 TACATTATAGCTCAA TGGCGTTTAGATTG TTTTTT CAGTCTAGACGTTA TTTTTTGAGGTACTG TERM 925 814357 - 814384 + F 80 -7.1 -4.63089 | overlap 814354 ATTATAGCTCAATGG CGTTTAGATTG TTTTTT CAGTCTAGACG TTATTTTTTGAGGTA rpsP 814687 - 814962 + | 30S ribosomal protein S16 SMU.866 814973 - 815212 + | hypothetical protein TERM 926 815209 - 815228 + F 82 -5 -5.37043 | TGTGATTGATGAAAA GTAGTAAC GGTA GTTGCTGC TTTTTTCTATAGAAT TERM 927 815337 - 815361 + G 70 -5 -4.61868 | opp_overlap 815340 815343, overlap 815340 AAGATTGTCAATACG CAAGGACTTC GAGGA GAAGTTCGTG TTTTATCTGTGACTG rimM 815301 - 815819 + | 16S rRNA-processing protein trmD 815809 - 816531 + | tRNA (guanine-N(1)-)-methyltransferase TERM 928 816676 - 816687 + G 74 -5.8 -4.67168 | overlap 816668 816667 CCGTTATCGGTGGCG GACC GGTT GGTC TTTTTACAGCTTTTT trxB2 816615 - 817628 + | putative thioredoxin reductase TERM 929 817652 - 817626 - f 91 -9.6 -4.44245 | opp_overlap 817631, overlap 817631 ACATCATTGATAAAA TAAAAGAAAGGA CTT TCCTTTCTTTTT GTTAATTTTTGGTAG TERM 930 817647 - 817631 - f 100 -9.5 -5.19275 | opp_overlap 817631, overlap 817626 ATTGATAAAATAAAA GAAAGGA CTT TCCTTTC TTTTTGTTAATTTTT TERM 931 817631 - 817647 + F 100 -9.5 -5.30199 | opp_overlap 817626 817631 ATTGATAAAATAAAA GAAAGGA CTT TCCTTTC TTTTTGTTAATTTTT TERM 932 818161 - 818149 - g 76 -2.7 -5.44721 | ATTAGTTGAAAAAAA TATCA ATA CGATA ATTATTGGTGGTTAT SMU.870 817697 - 818494 + | putative transcriptional regulator of sugar metabolism TERM 933 819314 - 819329 + G 74 -6.1 -4.652 | AATGGGGAGTGGCTT GCGGT ACAGCA ACCGC TTTTTCAGATGATTT pfkB 818491 - 819402 + | putative fructose-1-phosphate kinase TERM 934 819882 - 819896 + G 74 -10 -2.71657 | overlap 819881 819880 ACACCTGCTGCTCCA GTGGCT GAT AGCCAC GATTTTCTTGTTGCT SMU.872 819399 - 821366 + | putative PTS system, fructose-specific enzyme IIABC component TERM 935 821420 - 821474 + F 70 -4.5 -4.90381 | gap 1, opp_overlap 821420 821421 821453 TAATAAAAAAAATTA CTCCTCTTATTAGTGGACAGTGACAA ACAA TAGTCACT-TGAAATGATAAGAGGAG TTTTCTTGTATTCAA TERM 936 822999 - 822984 - g 70 -9 -3.16512 | opp_overlap 822986, overlap 822983 ACAATCAAGAGAAAT CAGACG GACA CGTCTG GCTTGGAAGCGTGGT metE 821698 - 823935 + | 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase SMU.874 823953 - 825809 + | bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase protein SMU.875c 826466 - 825849 - | putative transposase, IS150-like TERM 937 826359 - 826389 + g 82 -8.4 -4.3487 | gap 1 TGCTTTAAAGTTTCG GGCAAG-CACGTT GTAGTG GACGTGTCTTGCC TTTTCAGTTATCTCT TERM 938 826735 - 826701 - R 100 -11.5 -4.23045 | opp_overlap 826699 826698 826701, overlap 826704 CAACGACTTAATAAA GAAGGCCTCTTCTCA CTTTC TGAGGAGAGGCCTTA AGATCTTTAAAATGG TERM 939 826732 - 826704 - R 100 -13.2 -4.22554 | opp_overlap 826701 826699 826698, overlap 826701 CGACTTAATAAAGAA GGCCTCTTCTCA CTTTC TGAGGAGAGGCC TTAAGATCTTTAAAA TERM 940 827041 - 827097 + r 78 -7 -4.44915 | opp_overlap 827041, overlap 827048 TTCGCCATATGAAAA GAACCTCCTTATAA-GAACAGTATATAA CTT TTTTATACTGTCCATTATAAGT-GGTTC TTTTATAAGTGGTTC TERM 941 827097 - 827041 - R 88 -9.2 -4.34402 | opp_overlap 827041 827048 TTCGCCATATGAAAA GAACCTCCTTATAA-GAACAGTATATAA CTT TTTTATACTGTCCATTATAAGT-GGTTC TTTTATAAGTGGTTC msmR 828247 - 827411 - | putative MSM operon regulatory protein agaL 828355 - 830517 + | alpha-galactosidase TERM 942 831083 - 831069 - g 76 -2.8 -5.41359 | opp_overlap 831069 AATCAAAGCAAAAAA GGAAAC ACC GTTTGC TTTAGCGGGAACAGA msmE 830530 - 831792 + | multiple sugar-binding ABC transporter, sugar-binding protein precursor MsmE msmF 831805 - 832677 + | multiple sugar-binding ABC transporter, permease protein MsmF msmG 832692 - 833525 + | multiple sugar-binding ABC transporter, permease protein MsmG TERM 943 834752 - 834764 + G 79 -7.7 -4.26344 | AATACTTTTTGGCCC GCTTG ATA CAAGC TTTTGCTCCAGGTAT gtfA 833680 - 835125 + | sucrose phosphorylase, GtfA msmK 835140 - 836273 + | multiple sugar-binding ABC transporter, ATP-binding protein, MsmK dexB 836364 - 837974 + | dextran glucosidase DexB galR 839132 - 838128 - | galactose operon repressor GalR TERM 944 838662 - 838640 - G 75 -6.4 -4.43173 | AAAAATAATCTAAAA CTTTAACAAC AGC ATTGTCAAAG TCAGTCATTACGCAA TERM 945 838926 - 838939 + g 75 -2.4 -5.37043 | CTGCTGACTGTACCA TTGC ACGATA GCAA TTTTTTGTCTGACCT TERM 946 839317 - 839330 + G 72 -2.3 -5.24129 | opp_overlap 839320 CACGTTTTTGGAAGA GAAGC AGAC GCTAC TTTTTTCTCACCGGG galK 839269 - 840441 + | galactokinase galT 840446 - 841921 + | galactose-1-phosphate uridylyltransferase TERM 947 842973 - 842961 - g 72 -4.8 -4.84359 | opp_overlap 842961 GCATCTTCAGAAAAA GCAC GTGAG GTGC TTGGCTGGAAACCGC galE 842007 - 843071 + | UDP-galactose 4-epimerase, GalE pbpX 843360 - 844418 + | putative penicillin-binding protein, class C; fmt-like protein TERM 948 844431 - 844455 + F 100 -7.9 -5.63012 | opp_overlap 844431 TAAAAAGACAAGGGA CAGTACCATTT AAA AAGCGGTACTG TTTTTATTTGTTTTT TERM 949 845137 - 845152 + G 76 -5.4 -5.00138 | gap 1, overlap 845138 CATCACTGGTCTTAT G-GCAGG AAG CCTGCTC TTTTTGGTTTAAGTG TERM 950 845138 - 845150 + G 79 -9.1 -4.11472 | overlap 845137 ATCACTGGTCTTATG GCAGG AAG CCTGC TCTTTTTGGTTTAAG SMU.890 844622 - 845164 + | hypothetical protein TERM 951 846789 - 846777 - g 79 -9.1 -4.1196 | AACCTATGTCGAAAA GCGTG ACA CACGC GAAATTATCAATATT hsdM 845296 - 846900 + | type I restriction-modification system DNA methylase hsdS 846893 - 848704 + | putative type I restriction-modification system, specificity determinant; restriction endonuclease SMU.893 848735 - 849880 + | putative anticodon nuclease TERM 952 849917 - 849891 - f 74 -3 -5.33124 | opp_overlap 849891, overlap 849886 AATAATAAAACAAAA GCAAGAAATTAT ATT ACTTTTTCTTGC TTTTTTGGTATAATA SMU.895 849954 - 850226 + | DNA-damage-inducible protein SMU.896 850213 - 850491 + | hypothetical protein TERM 953 850832 - 850843 + G 73 -3 -5.3104 | opp_overlap 850832 TAAAATTCAAGAGAA TCAT ATTT ATGA TTTTATTTTTGATGA TERM 954 851661 - 851647 - g 78 -7.2 -4.39889 | AGAATGATAGTAAAA TTGTTG TGA CAACAA TTCAGAAATTAAATG SMU.897 850494 - 853541 + | putative type I restriction-modification system, helicase subunits TERM 955 853538 - 853560 + F 79 -3.6 -5.66684 | overlap 853557 GACTTATACAGGGAT TTAAAAAG GTGTCTA CTTTTTAA TTTTTTTGTAAATTA SMU.898 853755 - 854129 + | hypothetical protein TERM 956 854778 - 854759 - g 76 -3.6 -5.3236 | opp_overlap 854759 854761, overlap 854761 AGAACTGAGAAAAAA GCGATTAA GCGT TTAATCTC TATTATAGATGAGGT SMU.899 854135 - 854980 + | hypothetical protein TERM 957 855247 - 855266 + G 71 -6.4 -4.07568 | GAAAATGGTTTTCGT CCAGTTGT GGGA ACAACAGG TTTTACGCAAGAGCA dapB 854992 - 855759 + | dihydrodipicolinate reductase TERM 958 855773 - 855793 + G 90 -11.9 -3.6106 | opp_overlap 855771 GAGATTAAAACATTT GCCTTCTGA ATT TCAGGAGGC TTTACCAGTATTAGA TERM 959 855861 - 855879 + G 71 -9.6 -2.51702 | overlap 855860 855863 855871 GGCGGCAGTGTTCGT GATGTCCT TTT AGGGCATC CTATTCATGATGTTG papS 855756 - 856961 + | tRNA CCA-pyrophosphorylase SMU.902 856964 - 858832 + | putative ABC transporter, ATP-binding protein TERM 960 858847 - 858834 - f 70 -8.1 -3.04646 | opp_overlap 858833 858834 858830 858822, overlap 858833 AACTGGAGAAATAAT GCAGC AGTA GCTGC GCTTATTTTCCATTC TERM 961 858938 - 858952 + F 72 -5 -4.88163 | opp_overlap 858937 858938, overlap 858916 858937 CTAGCTACTATCAAT CTATTC CTA GAGTAG TTTATTTTGTCTTGA TERM 962 858992 - 859009 + F 83 -7 -4.91459 | GTCAGATTGTTGGAA CTGGAG GATTTG CTCCAG TTTTTCTGGCTGTTG SMU.905 859289 - 861025 + | putative ABC transporter, ATP-binding protein SMU.906 861036 - 862808 + | putative ABC transporter, ATP-binding protein TERM 963 862854 - 862874 + F 88 -6.2 -5.42514 | opp_overlap 862854 TATGGGCACTAAAAA CAAGTAAG AAGCC CTTGCTTG TTTTTTGCTTTCTCG SMU.909 862924 - 863844 + | putative permease TERM 964 864122 - 864105 - g 72 -5.5 -4.6902 | opp_overlap 864103 GTACAAGGTTAAAAA GCACTGG GTAA CCATTGC TGTCGCTTCTGGTTT TERM 965 866739 - 866772 + G 70 -8.9 -3.13191 | opp_overlap 866737, overlap 866737 866735 CCAACTCTTCAAATC TTGGGGTGTCACTTC CTTT GAAATGGCACCGCAA TATGTCTCTTCTGAA gtfD 864064 - 868452 + | glucosyltransferase-S TERM 966 868469 - 868491 + T 95 -8.5 -5.093 | ACTGACATAGCTTAA CGTGATCAA TAAAT TTGATCGCG TTTTCTTGTTTTAGA TERM 967 868572 - 868609 + T 83 -10.8 -2.9834 | opp_overlap 868573, overlap 868567 TTAAACAAATAAAAA ACTCCTAAAATCATTG CTATAT CAGTGATTTTAGGAGC TGTGCTTATGATAAT TERM 968 868608 - 868573 - T 100 -12.1 -5.85425 | opp_overlap 868572 868567 TAAACAAATAAAAAA CTCCTAAAATCATTG CTATAT CAGTGATTTTAGGAG CTGTGCTTATGATAA SMU.911c 869136 - 868627 - | hypothetical protein TERM 969 869290 - 869304 + H 70 -7.2 -3.66356 | opp_overlap 869271 869292 CCTTTCAATCTCAAG CAGTTT TCT AAACTG TTTGAGATTACCGGT SMU.913 869772 - 871121 + | glutamate dehydrogenase TERM 970 871126 - 871170 + T 85 -8.2 -4.68384 | opp_overlap 871125 871123 871128 871132, overlap 871127 871128 GAATTGTATAAACAC TAGTAACTTAAGAATACA AGCTTACAA TGTATTCTTAAGTTACGG TTTTCTTAAATAAGT TERM 971 871127 - 871169 + T 80 -9.5 -3.40307 | opp_overlap 871125 871123 871128 871132, overlap 871126 871128 AATTGTATAAACACT AGTAACTTAAGAATACA AGCTTACAA TGTATTCTTAAGTTACG GTTTTCTTAAATAAG TERM 972 871168 - 871128 - T 100 -13 -2.90065 | opp_overlap 871127 871126 871128, overlap 871125 871123 871132 ATTGTATAAACACTA GTAACTTAAGAATACA AGCTTACAA TGTATTCTTAAGTTAC GGTTTTCTTAAATAA TERM 973 871128 - 871168 + T 95 -13 -2.63702 | opp_overlap 871128 871125 871123 871132, overlap 871127 871126 ATTGTATAAACACTA GTAACTTAAGAATACA AGCTTACAA TGTATTCTTAAGTTAC GGTTTTCTTAAATAA TERM 974 871164 - 871132 - T 71 -8 -3.31691 | opp_overlap 871128 871127 871126, overlap 871128 871125 871123 TATAAACACTAGTAA CTTAAGAATACA AGCTTACAA TGTATTCTTAAG TTACGGTTTTCTTAA TERM 975 871203 - 871235 + T 85 -5 -5.63517 | gap 1, opp_overlap 871208, overlap 871208 TTCAATAAATATATA TATAAGGCCTGGAAG TGAG TTTCCAGACCTT-TA TTTTTTATTTCGAAA TERM 976 871208 - 871231 + T 91 -7.4 -5.26158 | opp_overlap 871208, overlap 871203 TAAATATATATATAA GGCCTGGAAG TGAG TTTCCAGACC TTTATTTTTTATTTC TERM 977 871231 - 871208 - T 80 -8.9 -3.70689 | opp_overlap 871208 871203 TAAATATATATATAA GGCCTGGAA GTGAGT TTCCAGACC TTTATTTTTTATTTC SMU.914c 871616 - 871233 - | hypothetical protein SMU.915c 872213 - 871725 - | 7-cyano-7-deazaguanine reductase SMU.916c 872957 - 872226 - | hypothetical protein TERM 978 872579 - 872591 + g 70 -7.7 -3.61398 | opp_overlap 872579 AAGTTACTTGATCAA TGGCT TTT AGCCA TTCTTGCCAGCGAGA SMU.917c 873385 - 872939 - | putative 6-pyruvoyl tetrahydropterin synthase SMU.919c 874038 - 873385 - | putative ATPase, confers aluminum resistance TERM 979 873680 - 873668 - G 74 -6.3 -4.6902 | GGATAACCTGAAAAA TCTGT TTG ACAGA CTCCGGTGACAATAT TERM 980 874108 - 874086 - H 84 -6.3 -5.1861 | TTGAGCAGTAAAAAA GCTCCTAAT ATAAA AATAGGAGC TGCCAAATAATAGGC TERM 981 874319 - 874333 + H 82 -8.6 -4.14392 | opp_overlap 874319 AAGGCGAAAAGTGAA TAGTCC AGC GGACTA TTTTAGAAATTCAAG TERM 982 874333 - 874319 - H 76 -8.6 -3.37939 | opp_overlap 874319 AAGGCGAAAAGTGAA TAGTCC AGC GGACTA TTTTAGAAATTCAAG TERM 983 874533 - 874562 + H 77 -8.9 -3.27475 | opp_overlap 874530 874533 874541 874542, overlap 874531 874539 TAGTTTAAGGAATCA TTATAATAGTTTT CATG AGAACTATTATAA TATTCTCATAAAAAG SMU.921 874590 - 875024 + | putative transcriptional regulator SMU.922 875028 - 876830 + | putative ABC transporter, ATP-binding protein SMU.923 876820 - 878574 + | putative ABC transporter, ATP-binding protein tpx 878771 - 879256 + | thiol peroxidase TERM 984 879291 - 879261 - f 80 -10.6 -2.71815 | opp_overlap 879260 879259 879268, overlap 879268 CAGTGAAATAAGTTA GTAAAAAGGCACAA TTT CTGTGTCTTTTTAC CGTTTAGGACAAAAT SMU.925 879393 - 879863 + | hypothetical protein TERM 985 879918 - 879876 - f 100 -16.6 -3.7791 | opp_overlap 879876 879885, overlap 879885 TAATGACTGATTAAA CCACAAAAAGCCTACCAT GCAGATA ATGCTAGGCTTTTTGTGG TTATGGCAGCTAGTT TERM 986 879876 - 879918 + F 100 -16.6 -3.30619 | opp_overlap 879876 879885, overlap 879885 TAATGACTGATTAAA CCACAAAAAGCCTACCAT GCAGATA ATGCTAGGCTTTTTGTGG TTATGGCAGCTAGTT TERM 987 879885 - 879909 + F 73 -4.3 -5.01535 | opp_overlap 879876 879885, overlap 879876 ATTAAACCACAAAAA GCCTACCAT GCAGATA ATGCTAGGC TTTTTGTGGTTATGG TERM 988 879909 - 879885 - f 73 -4.3 -5.05228 | opp_overlap 879885 879876, overlap 879876 ATTAAACCACAAAAA GCCTACCAT GCAGATA ATGCTAGGC TTTTTGTGGTTATGG SMU.926 880091 - 880714 + | GTP-pyrophosphokinase SMU.927 880715 - 881401 + | putative response regulator SMU.928 881401 - 882639 + | putative histidine kinase TERM 989 882683 - 882655 - T 100 -13.3 -5.36441 | opp_overlap 882655 TTTTGATATAAAAAA TGAGGTTAGGATA TTT TATCCTGACCTCA TTTTTAACCTATTAA TERM 990 882655 - 882683 + T 100 -15.5 -4.66953 | opp_overlap 882655 TTTTGATATAAAAAA TGAGGTTAGGATA TTT TATCCTGACCTCA TTTTTAACCTATTAA SMU.929c 883045 - 882695 - | hypothetical protein SMU.930c 884103 - 883192 - | putative transcriptional regulator TERM 991 885167 - 885177 + G 71 -6.8 -4.10453 | TCGTAAACTTTTTGG CGGT AAA ACCG TTTTGGGAGGATTTG SMU.932 884361 - 885368 + | hypothetical protein SMU.933 885392 - 886246 + | putative amino acid ABC transporter, periplasmic amino acid-binding protein SMU.934 886256 - 886948 + | putative amino acid ABC transporter, permease protein SMU.935 886957 - 887631 + | putative amino acid ABC transporter, permease protein SMU.936 887641 - 888405 + | putative amino acid ABC transporter, ATP-binding protein TERM 992 888442 - 888478 + F 100 -9.7 -5.15634 | TAAAAAGAATTACAG TTCTCTAAGTTAGAA ATGAACA TTCTGACTTAGGGAA TTTTTTAGTCAGATA TERM 993 889265 - 889287 + G 71 -9.2 -2.71924 | opp_overlap 889264, overlap 889264 GGACTATTTAAAAGC TGCTGACTTT GAA AAAGTCGGCG ATTTAACAGAAGCTA SMU.937 888612 - 889544 + | putative mevalonate diphosphate decarboxylase SMU.938 889546 - 890544 + | putative phosphomevalonate kinase TERM 994 891359 - 891337 - g 87 -8.4 -4.84311 | TTGGACATAATAAAA GCTTTGGTCC TTG GAGCCAAAGC GGTCGGTTTATCTCG SMU.939 890554 - 891549 + | isopentenyl pyrophosphate isomerase TERM 995 891628 - 891600 - T 80 -7.5 -4.19649 | opp_overlap 891600 891605, overlap 891605 AAAATTAAATAATAA GAAAACTCCGTTT TTG AAGCGGAGTTTTA ATTTTATAGCATATA TERM 996 891600 - 891628 + T 78 -9.7 -3.24447 | opp_overlap 891600 891605, overlap 891605 AAAATTAAATAATAA GAAAACTCCGTTT TTG AAGCGGAGTTTTA ATTTTATAGCATATA TERM 997 891605 - 891623 + T 93 -9.6 -4.73108 | opp_overlap 891600 891605, overlap 891600 TAAATAATAAGAAAA CTCCGTTT TTG AAGCGGAG TTTTAATTTTATAGC TERM 998 891623 - 891605 - T 88 -7.4 -5.04082 | opp_overlap 891605 891600, overlap 891600 TAAATAATAAGAAAA CTCCGTTT TTG AAGCGGAG TTTTAATTTTATAGC SMU.940c 892288 - 891632 - | putative hemolysin III SMU.941c 892598 - 892257 - | hypothetical protein mvaA 894153 - 892870 - | putative hydroxymethylglutaryl-CoA reductase SMU.943c 895306 - 894131 - | putative hydroxymethylglutaryl-CoA synthase TERM 999 895619 - 895606 - g 76 -3.8 -5.19879 | opp_overlap 895606 TCCTAAATATAAAAA TGGC AAGACA GCCA ATTCTAAATATATTA TERM 1000 895976 - 895956 - g 71 -4 -5.01732 | opp_overlap 895958 AAGCCTTTGAAAAAA CAGAAGGT CTCCT ACCTTGTG CCTTTCAAATCATGT thyA 895514 - 896353 + | thymidylate synthase TERM 1001 896361 - 896379 + F 83 -6 -5.24129 | opp_overlap 896360 896361 896374 CTATTTAAAAATGAC GAGCCA ATAATTA TGGCTC TTTTTTATAAAAAAC SMU.946 896470 - 897249 + | putative permease TERM 1002 897278 - 897300 + F 78 -2.1 -5.77853 | gap 1 ATACAATAGACAAAA TGCATTTGAG TTTT TTCAA-TGCA TTTTTTTTAGAAATT dfrA 897334 - 897846 + | putative dihydrofolate reductase SMU.948 897864 - 898034 + | hypothetical protein TERM 1003 898900 - 898874 - g 100 -14 -4.17048 | opp_overlap 898877 898880, overlap 898877 898880 CTTTGGTCAAAATAA TAAGAAGATTGA TGA TCAATCTTCTTA TATGCAAGAAATTAT TERM 1004 898897 - 898877 - g 88 -11.3 -4.20868 | opp_overlap 898877 898880, overlap 898874 898880 TGGTCAAAATAATAA GAAGATTGA TGA TCAATCTTC TTATATGCAAGAAAT TERM 1005 898877 - 898897 + G 83 -11.3 -3.48395 | opp_overlap 898877 898874 898880, overlap 898880 TGGTCAAAATAATAA GAAGATTGA TGA TCAATCTTC TTATATGCAAGAAAT TERM 1006 898880 - 898894 + G 72 -7.2 -3.88232 | opp_overlap 898880 898877 898874, overlap 898877 TCAAAATAATAAGAA GATTGA TGA TCAATC TTCTTATATGCAAGA TERM 1007 898894 - 898880 - g 76 -7.2 -4.20953 | opp_overlap 898877 898880, overlap 898877 898874 TCAAAATAATAAGAA GATTGA TGA TCAATC TTCTTATATGCAAGA clpX 898059 - 899291 + | ATP-dependent protease ATP-binding subunit SMU.950 899307 - 899900 + | GTPase EngB TERM 1008 899942 - 899974 + F 91 -7.2 -5.25735 | gap 1, opp_overlap 899942 GTTGATTAGATGAAG GGTGTGATTC-CTAT AAAC ATAGTGAGTCATACC TTTTTGCTTTTTTAG TERM 1009 900454 - 900464 + G 73 -6.8 -4.26327 | TTAGCAGTAGCTATG CCTG TTA CAGG TTCTTTTCATACCTA SMU.951 900229 - 901605 + | putative amino acid permease mmuM 901615 - 902565 + | homocysteine methyltransferase TERM 1010 902666 - 902695 + T 89 -8.7 -4.7254 | opp_overlap 902666 TAAGCTATCGAAAAA TACAGGCTGGAAT GGTT GTTCTAGTCTGTA TTTTTACTCGAAAAT SMU.953c 903961 - 902699 - | putative transcriptional regulator/aminotransferase SMU.954 904059 - 904910 + | pyridoxamine kinase SMU.955 904907 - 905440 + | hypothetical protein TERM 1011 905480 - 905451 - T 100 -14.5 -5.54192 | ATTAATTTAAAAAAA GAGAGACTAGAAT TAGC ATTCTAGCCTCTC AAATTGCATAGGATT clp 907599 - 905494 - | putative Clp-like ATP-dependent protease, ATP-binding subunit TERM 1012 906586 - 906596 + g 71 -4 -4.87389 | TTGTTGTTTATCTTT TTCA GTT TGAA TTTCTTTTTCAAGTG TERM 1013 907026 - 907008 - G 83 -9 -4.2231 | AACCAGCACCTAAAA TTTGATGA ATT TCATCAAA GAAGAGGATGATATT rplJ 907994 - 908497 + | 50S ribosomal protein L10 TERM 1014 908523 - 908509 - gTf 74 -8.6 -3.36569 | overlap 908507 TTAAGTCTTCAAACA GTAGCA TAG TGCTAC AAATTATTTAAGAAA SMU.958 908214 - 908534 + | hypothetical protein SMU.959c 908795 - 908541 - | hypothetical protein rplL 908563 - 908931 + | 50S ribosomal protein L7/L12 TERM 1015 908966 - 908990 + FH 100 -9.3 -5.39681 | opp_overlap 908966 908968 TATTCAAACAATAAA GTCCGCTAAGG TTT TCTTAGTGGGC TTTTTCTTTGGTTAT SMU.961 909198 - 909749 + | hypothetical protein SMU.962 909770 - 910837 + | putative dehydrogenase TERM 1016 910989 - 910965 - T 100 -13.1 -4.15453 | opp_overlap 910970, overlap 910970 TAATGGAGGCGAAAA CTAAATAATCC AGC GGATTATTTAG AAATCTAAGGACTGT TERM 1017 910984 - 910970 - T 76 -7.2 -4.20806 | opp_overlap 910970, overlap 910965 GAGGCGAAAACTAAA TAATCC AGC GGATTA TTTAGAAATCTAAGG TERM 1018 910970 - 910984 + T 70 -7.2 -3.59262 | opp_overlap 910965 910970 GAGGCGAAAACTAAA TAATCC AGC GGATTA TTTAGAAATCTAAGG TERM 1019 911148 - 911120 - T 81 -10.4 -2.87132 | overlap 911142 911143 TTGTTGTCCTAGAGA CCCATCGTCT AAAAAATAA AGACGATGGG AATACCCACCAGTTG TERM 1020 911426 - 911389 - T 84 -10.8 -3.17274 | opp_overlap 911390 911395, overlap 911395 CAAGGATAATATATA TCAAAAGACTAGGACT GTTTTT AATCCTAGTCTTTTGT CGTTACTGAATGGCA TERM 1021 911390 - 911425 + T 100 -12.8 -2.79098 | opp_overlap 911389 911395, overlap 911395 AAGGATAATATATAT CAAAAGACTAGGACTG TTTT TAATCCTAGTCTTTTG TCGTTACTGAATGGC TERM 1022 911395 - 911420 + T 79 -6.9 -4.56607 | opp_overlap 911395 911389, overlap 911390 TAATATATATCAAAA GACTAGGACTG TTTT TAATCCTAGTC TTTTGTCGTTACTGA TERM 1023 911420 - 911395 - T 85 -8.4 -4.4296 | opp_overlap 911390 911395, overlap 911389 TAATATATATCAAAA GACTAGGACT GTTTTT AATCCTAGTC TTTTGTCGTTACTGA SMU.963c 912328 - 911429 - | putative deacetylase TERM 1024 911734 - 911750 + g 76 -5.1 -5.13137 | TCAGAGTATGAGATT GGAAAGA CAT TCCTTCC TTTTTCATTTCTTTC TERM 1025 912423 - 912412 - H 77 -3 -5.69379 | ATATAATGAAAAAAA TTGT GTTT ACAA GGAGAAGGAAATGTC SMU.965 912434 - 913720 + | homoserine dehydrogenase SMU.966 913722 - 914588 + | homoserine kinase TERM 1026 914865 - 914851 - g 76 -5.7 -4.85599 | TGGATGCTAGAAAAA TTGGG CAATC CCCAA CGGCATATTTGCGGC folC 914758 - 916035 + | putative folyl-polyglutamate synthetase TERM 1027 916209 - 916221 + G 76 -4.1 -5.24129 | overlap 916183 GAGGATCCTAAAGAC CAGTT TAC AGCTG TTTTTTCTGAAGAAC folE 916041 - 916619 + | GTP cyclohydrolase I folP 916629 - 917429 + | dihydropteroate synthase folA 917437 - 917799 + | putative dihydroneopterin aldolase folK 917796 - 918275 + | putative 2-amino-4-hydroxy-6-hydroxymethylpteridine pyrophosphokinase TERM 1028 918361 - 918377 + F 72 -3.7 -5.21709 | opp_overlap 918346 918361 TTTGATATAATAAAA TCGGT TTAATTT ACCGA TTTTTTAATATGAAA murB 918410 - 919330 + | UDP-N-acetylenolpyruvoylglucosamine reductase potA 919334 - 920488 + | putative spermidine/putrescine ABC transporter, ATP-binding protein potB 920472 - 921266 + | putative spermidine/putrescine ABC transporter, permease protein TERM 1029 921801 - 921822 + G 70 -5.1 -4.54477 | opp_overlap 921803, overlap 921803 TGCTGCCTTATTTAA CACCTAGCA TTAT TGCTGGGTA TTTTATGGCTTTTAC TERM 1030 921803 - 921820 + G 72 -7.7 -3.86814 | opp_overlap 921803, overlap 921801 CTGCCTTATTTAACA CCTAGCA TTAT TGCTGGG TATTTTATGGCTTTT potC 921263 - 922039 + | putative spermidine/putrescine ABC transporter, permease protein potD 922032 - 923105 + | putative ABC transporter, periplasmic spermidine/putrescine-binding protein TERM 1031 923112 - 923127 + F 75 -2.6 -5.68438 | CGTAAATAAAGTTTT CTAAGA TATT TTTTAG TTTTTTATTTAATAG licT 923353 - 924027 + | putative transcriptional antiterminator LicT (fragment) TERM 1032 924047 - 924069 + F 100 -7.1 -5.80951 | opp_overlap 924047 TAGTTTCAGATTGAA GACAAACTT ACTTG AGGTTTGTC TTTTTTCTTTTGCCT TERM 1033 925455 - 925469 + G 71 -4.2 -4.72007 | overlap 925457 CTGGTGTCATTCTTG TAGCGA CTA TCGCCA TTTGTTTTGCTCAAG TERM 1034 925779 - 925797 + G 73 -3.8 -5.07652 | overlap 925783 TCTTAATCGCTATTG CTATGAAC TTT GTTCTTGG TTTTGTTTTAACACA bglP 924428 - 926362 + | putative PTS system, beta-glucoside-specific EII component bglB1 926535 - 927422 + | putative BglB fragment bglB2 927460 - 928017 + | putative BglB fragment bglC 929155 - 928250 - | putative transcriptional regulator TERM 1035 929646 - 929683 + G 74 -7.7 -3.95183 | opp_overlap 929645 AAAGGCTATACAACG GGTAATCAGGCAAAAGT TGGA GCTATAGCCTGCTTACC TTCTTATCTATCTGA SMU.984 929340 - 929840 + | hypothetical protein TERM 1036 931191 - 931177 - g 70 -5 -4.60487 | overlap 931179 GATTATCTTCAAAAA CACTTG ATG CAAGTA GGAGAAGCCCTGCAA bglA 929971 - 931410 + | putative beta-glucosidase TERM 1037 931473 - 931439 - T 70 -7.3 -3.58159 | opp_overlap 931441, overlap 931437 931441 TTAAAAATTTAAAGA GAGTTTAGGGTGAAA TTCAC TTTCACTCTAAACTT TTTTGTTGGCAGTAA TERM 1038 931441 - 931471 + T 100 -12.1 -5.45652 | opp_overlap 931441 931439 931437 AAAAATTTAAAGAGA GTTTAGGGTGAAA TTCAC TTTCACTCTAAAC TTTTTTGTTGGCAGT TERM 1039 931471 - 931441 - T 82 -9.9 -3.34803 | opp_overlap 931441, overlap 931439 931437 AAAAATTTAAAGAGA GTTTAGGGTGAAA TTCAC TTTCACTCTAAAC TTTTTTGTTGGCAGT SMU.986c 932013 - 931498 - | hypothetical protein TERM 1040 931859 - 931886 + g 72 -5.8 -4.49556 | gap 1 AAATTATTTGTTTGT CCATTAG-AATTT TCA AGATTACTAATGG TTTGTTTGGTAACAC wapA 932362 - 933723 + | cell wall-associated protein precursor WapA TERM 1041 933745 - 933778 + F 81 -3.9 -5.61689 | opp_overlap 933745, overlap 933775 933776 TTATGCTAATAAAAC CGAGGTTGGAA TCGAAGCTGATT TTCCTACCTCG TTTTTTATTGCTTTT TERM 1042 935376 - 935366 - g 71 -4 -4.87786 | TCAACTTTACAAAAA GAAA AAA TTTC GACAAAATTAATTGG SMU.988 934040 - 935425 + | putative cardiolipin synthase TERM 1043 935594 - 935613 + F 88 -6.4 -5.5074 | overlap 935595 ATCAAAAGTGCCTTT TCCCTTGT AATA ACAAGGGC TTTTTTATTGAATTC TERM 1044 935595 - 935612 + F 87 -9.9 -3.88817 | overlap 935594 TCAAAAGTGCCTTTT CCCTTGT AATA ACAAGGG CTTTTTTATTGAATT asd 935710 - 936786 + | aspartate-semialdehyde dehydrogenase dapA 936827 - 937708 + | dihydrodipicolinate synthase TERM 1045 937714 - 937737 + F 93 -9.6 -4.66163 | TGAGAAATGATTGCA GCACACTGGT TTTT GCTAGTGTGC TTTTTGAATGGGGCT SMU.991 937986 - 938354 + | putative ribonucleotide reductase TERM 1046 938525 - 938467 - f 83 -10.5 -3.13737 | opp_overlap 938469 CAATATCTAAAATTA GGTGAGAGTCACAACAAATCAACTTCT TCTTG AGCTACTGATTTGTTGTGACTCTCATT TTGTATTTACAACGA TERM 1047 938469 - 938523 + F 100 -13.8 -4.78848 | opp_overlap 938467 ATATCTAAAATTAGG TGAGAGTCACAACAAATCAACTTCTT CTT GAGCTACTGATTTGTTGTGACTCTCA TTTTGTATTTACAAC SMU.992 938639 - 939604 + | hypothetical protein rbgA 939801 - 940652 + | ribosomal biogenesis GTPase rnhB 940639 - 941421 + | ribonuclease HII TERM 1048 941449 - 941410 - f 74 -6.8 -4.20354 | opp_overlap 941410 AAGTCAATGTTAAAA GAAAAGAACTAAAA AGGCTGTATTTG TTTTAGTTCTTTTC TTTTTATGAAAATAT TERM 1049 941410 - 941449 + F 83 -6.8 -4.84761 | opp_overlap 941410 AAGTCAATGTTAAAA GAAAAGAACTAAAA AGGCTGTATTTG TTTTAGTTCTTTTC TTTTTATGAAAATAT TERM 1050 941545 - 941563 + F 77 -7.5 -3.98716 | TGATAAAATGGTTTT GTAAGCT AATTA AGCTTAC TTTAATTAATCATTT TERM 1051 942132 - 942147 + G 84 -6.2 -5.3104 | TTTTCCATCATGACT TCTCAT CGAT ATGAGA TTTTATTTTTGGTGC SMU.995 941595 - 942557 + | ferrichrome ABC transporter permease protein TERM 1052 943032 - 943047 + G 85 -6.2 -5.46698 | CTTTTTTTCAGATGC TCATTG ATCC CAATGA TTTTTTGATTTTGCA SMU.996 942554 - 943525 + | ferrichrome ABC transporter permease protein SMU.997 943522 - 944328 + | putative inorganic ion ABC transporter, ATP-binding protein; ferrichrome transport system TERM 1053 944742 - 944703 - g 73 -6.7 -4.2123 | gap 1, opp_overlap 944712 944712 944715, overlap 944705 944711 944713 TATTCAGCTAAGAAA TATCAAAATGCAGGTTCA CTTTT TGAACCTG-ACTTTGAAA CAATTGCAAAACTGC TERM 1054 944740 - 944705 - g 78 -9.3 -3.70307 | gap 1, opp_overlap 944712 944712 944715, overlap 944703 944711 944713 TTCAGCTAAGAAATA TCAAAATGCAGGTTCA CTTTT TGAACCTG-ACTTTGA AACAATTGCAAAACT TERM 1055 944734 - 944711 - g 70 -4.7 -4.55446 | gap 1, opp_overlap 944712 944712 944715, overlap 944705 944703 944713 TAAGAAATATCAAAA TGCAGGTTCA CTTTT TGAACCTG-A CTTTGAAACAATTGC TERM 1056 944733 - 944713 - g 74 -9.8 -2.57358 | opp_overlap 944712 944712 944715, overlap 944711 944705 944703 AGAAATATCAAAATG CAGGTTCA CTTTT TGAACCTG ACTTTGAAACAATTG SMU.998 944370 - 945392 + | putative ABC transporter, periplasmic ferrichrome-binding protein TERM 1057 945427 - 945400 - f 100 -10 -5.63012 | opp_overlap 945400 AAAAATAAAGAAAAA GCGTTCGATT AGCGAAAA AATCGAACGC TTTCATGCTATAATG TERM 1058 945400 - 945427 + F 87 -10 -3.82665 | opp_overlap 945400 AAAAATAAAGAAAAA GCGTTCGATT AGCGAAAA AATCGAACGC TTTCATGCTATAATG SMU.999 945464 - 945745 + | hypothetical protein SMU.1000 945720 - 945845 + | hypothetical protein TERM 1059 945877 - 945860 - f 82 -8.5 -3.97659 | opp_overlap 945860 AATAATGTAATGAAA CTCTATC AATT GATAGAG TTTTTTCGAATAGTT TERM 1060 945860 - 945877 + F 95 -8.5 -5.07053 | opp_overlap 945860 AATAATGTAATGAAA CTCTATC AATT GATAGAG TTTTTTCGAATAGTT smf 945912 - 946754 + | putative DNA processing Smf protein TERM 1061 948361 - 948377 + G 73 -7.3 -4.11216 | AAGCGTTACTATGTA CGTTTAG TAT CTAAGCG TTTTGAGCCTACAGA TERM 1062 948906 - 948896 - g 79 -2.4 -5.60993 | TCGTTGAGAAAAAAA TCCG TGG CGGC GGCAAACAAGTTGTT topA 946849 - 948966 + | DNA topoisomerase I gid 949332 - 950666 + | tRNA (uracil-5-)-methyltransferase Gid TERM 1063 950847 - 950826 - f 70 -7.3 -3.57144 | opp_overlap 950826 CGTTTCATTGCTAAA GTTGGAGTT TGTA ATCTCCAAC TTTGCCAGATGCTGT TERM 1064 950995 - 951022 + F 80 -5.8 -5.06414 | opp_overlap 950995 TAAAAAATTTGAATA TTCTTTTTTATT TTTA AAGAAAAAAGAA TTTTTGTTGCAAAAA TERM 1065 951037 - 951023 - f 78 -5.8 -4.88687 | opp_overlap 951022 951023 TTAAAGAAAAAAGAA TTTTTG TTG CAAAAA GATTGTTTTATTATT TERM 1066 952583 - 952601 + G 70 -8.8 -3.21695 | overlap 952578 CTATTTTAGAGGCAT GGAGTGAC AAC GACACTCC TTACCTTCATGATGA gtfB 951112 - 955542 + | glucosyltransferase-I TERM 1067 955578 - 955552 - f 100 -9.5 -5.1848 | opp_overlap 955552 AACTAATTGAAAAAA CGCTCTCTTAA GTTAA TTAAGAGGGCG TTTCTAGGGTTAGGA TERM 1068 955552 - 955578 + F 100 -11.7 -3.92522 | opp_overlap 955552 AACTAATTGAAAAAA CGCTCTCTTAA GTTAA TTAAGAGGGCG TTTCTAGGGTTAGGA TERM 1069 956231 - 956221 - g 72 -5.4 -4.65078 | opp_overlap 956221 ATAGTTCCAATAAAA CCAA AGA TTGG TAAATTAAAACAGCC gtfC 955738 - 960105 + | glucosyltransferase-Si TERM 1070 960159 - 960188 + F 83 -5.8 -5.17054 | opp_overlap 960159 TTCTAATGTTAAAAA GAAGTCTGAG CTGTAAATTT CTCAGGCTTC TTTTTTGGCTGTTAT TERM 1071 960244 - 960213 - f 81 -3.1 -5.86061 | gap 1, opp_overlap 960217, overlap 960215 960217 TGTTATCAAAAAAAA CAG-AGCCAAACTA AAATA TTGTTTGGCTTCTA TTAAATTAATGTCAA SMU.1006 960370 - 961122 + | putative ABC transporter, ATP-binding protein TERM 1072 961988 - 961998 + G 75 -6.8 -4.46757 | AACATTACTCTGCTA GCCA TTA TGGC TTTTGTAACTATATT SMU.1007 961124 - 963127 + | putative ABC transporter, permease protein TERM 1073 963154 - 963125 - f 87 -10.9 -3.45527 | opp_overlap 963131, overlap 963131 AAAATTATTGAAAGA TAAAAAGTGACGA TTTT TCGTCACTTTTTT GGTAGAATAAAGTTA TERM 1074 963131 - 963148 + F 100 -9.9 -5.15634 | opp_overlap 963125 963131 ATTGAAAGATAAAAA GTGACGA TTTT TCGTCAC TTTTTTGGTAGAATA TERM 1075 963148 - 963131 - f 100 -9.9 -5.20783 | opp_overlap 963131, overlap 963125 ATTGAAAGATAAAAA GTGACGA TTTT TCGTCAC TTTTTTGGTAGAATA SMU.1008 963169 - 963840 + | putative response regulator TERM 1076 964187 - 964173 - g 81 -10 -3.76778 | opp_overlap 964172 964175 AAAACGCAGGAAGAA CAGCTG CAG CAGCTG ATTAAATTGTGGTCC TERM 1077 964363 - 964343 - g 73 -6.9 -4.19704 | overlap 964352 TAAGTTCAGTCAAAA TCAAAGCGA TTT TCGTTTTGA AAAGTGTCAGATTCG SMU.1009 963837 - 964790 + | putative histidine kinase citC 965990 - 964941 - | putative citrate lyase ligase citG 967056 - 966166 - | putative CitG protein TERM 1078 966805 - 966784 - G 78 -7.3 -4.38712 | opp_overlap 966788 CTCAGTTGCAGAAAA CATAGCAGC CTCA GCTTCTATG CCAAGTTTTCTGAGT SMU.1012c 967751 - 967062 - | putative transcriptional regulator SMU.1013c 969384 - 967981 - | putative Mg2+/citrate transporter TERM 1079 969526 - 969506 - H 79 -4.7 -5.26119 | overlap 969507 969509 CGCTTAAAAATAAAA CGATCTTCT TTA AGAAGAACA CAAAAAAAACATTTT SMU.1014 969627 - 970007 + | hypothetical protein bcc 970026 - 970418 + | acetyl-CoA carboxylase biotin carboxyl carrier protein subunit oadB 970441 - 971562 + | putative oxaloacetate decarboxylase, sodium ion pump subunit SMU.1018 971596 - 971724 + | hypothetical protein TERM 1080 971836 - 971825 - g 74 -5.8 -4.53602 | opp_overlap 971825 971824 TGGATATTAAACAAA CAGC TGTT GCTG GTTCGTTAGAATCTA cilG 971809 - 972117 + | citrate lyase subunit gamma cilB 972105 - 973007 + | putative citrate lyase CilB, citryl-CoA lyase, beta subunit cilA 972994 - 974529 + | putative citrate lyase, alfa subunit citX 974570 - 975058 + | 2'-(5''-triphosphoribosyl)-3'-dephospho-CoA:apo-citrate lyase TERM 1081 975093 - 975081 - g 80 -6.3 -5.06735 | TAGAAATGACAAAAA TCCAT ATT ATGGA GACGGTTTTAAGAGA pycB 975071 - 976462 + | oxaloacetate decarboxylase TERM 1082 976533 - 976577 + T 100 -12.4 -4.73864 | opp_overlap 976539, overlap 976534 976539 TTGGACAAGAAATTA TTGAAAGGATTTAGTCCTGT ATTGC ACAGGGCTGAGTCCTTTTAG TTTTGTCTTGATTCG TERM 1083 976534 - 976576 + T 100 -13.7 -3.43234 | opp_overlap 976539, overlap 976533 976539 TGGACAAGAAATTAT TGAAAGGATTTAGTCCTGT ATTGC ACAGGGCTGAGTCCTTTTA GTTTTGTCTTGATTC TERM 1084 976539 - 976571 + T 100 -11.4 -4.76874 | opp_overlap 976539, overlap 976534 976533 AAGAAATTATTGAAA GGATTTAGTCCTGT ATTGC ACAGGGCTGAGTCC TTTTAGTTTTGTCTT SMU.1024c 976691 - 976530 - | putative putative transposase TERM 1085 976789 - 976821 + H 71 -8.7 -2.87564 | opp_overlap 976792, overlap 976792 TTGTTTTTTGCCTTA TAATATGTGTACAAA CTA TATGTATACATATTA TATGTGGAGGAATAA SMU.1025 976838 - 977263 + | putative transcriptional regulator SMU.1026 977310 - 977690 + | hypothetical protein TERM 1086 977844 - 977833 - g 70 -3 -5.06103 | AGAATTTTGAAAAAA TATC AGAT GATA AAAAAAAGCTAATAA TERM 1087 978229 - 978210 - g 76 -2.8 -5.34555 | CTATATCATAAAAAA TCAAGCGA AAAA TCACGTGA GATTATTTTAAGTGC TERM 1088 978411 - 978396 - g 76 -4.8 -5.17576 | opp_overlap 978396 CATGAATTTAAAAAA GATATT AAAG AATATC TCGATTTAATGATTT SMU.1027 977808 - 978446 + | putative transcription regulator TERM 1089 978576 - 978564 - g 73 -2.7 -5.24129 | GTTTTTCAGAAAAAA CTTAT GAT ACAAG GAGTGTTAAACTGAA SMU.1028 978482 - 979516 + | putative hydrolase or acyltransferase TERM 1090 979701 - 979741 + F 100 -11.4 -4.25104 | overlap 979703 GGACGCAAAGACGCA GAGCCGATAATGTAAGAT ATACA ATCTTATGTTATCGGCTA TTTTCATCAGGAGAA TERM 1091 979703 - 979739 + F 100 -14 -3.73042 | overlap 979701 ACGCAAAGACGCAGA GCCGATAATGTAAGAT ATACA ATCTTATGTTATCGGC TATTTTCATCAGGAG TERM 1092 979881 - 979910 + F 100 -8 -5.80003 | opp_overlap 979881 979889 TCAAAACCGGCAAAG CACATGAACAGA GAGCAA TCTGTTTGTGTG TTTTTTATTTATTCG SMU.1029 980040 - 980396 + | hypothetical protein SMU.1030 980476 - 980706 + | putative polyribonucleotide nucleotidyltransferase; Tn916 ORF8-like TERM 1093 981014 - 981026 + F 71 -7.7 -3.44255 | overlap 981012 981025 GTGAGATTTCCGTGA GCCTT GCC AAGGC TGTTTGACTGCTTGT xis 981073 - 981276 + | putative transposon excisionase; Tn916 ORF1-like tnr5 981357 - 982523 + | putative transposon integrase; Tn916 ORF3-like xerS 984043 - 982973 - | site-specific tyrosine recombinase XerS glrA 984162 - 985043 + | putative ABC transporter, ATP-binding protein SMU.1036 985064 - 985807 + | hypothetical protein TERM 1094 985849 - 985811 - T 100 -12 -4.91459 | opp_overlap 985811 CAAGACTTATAAAAA GAATCATTGTGCATTA TTATATT TTATGCACAATGATTC TTTTTTTATAGCGTT TERM 1095 985811 - 985849 + T 100 -12 -5.63504 | opp_overlap 985811 CAAGACTTATAAAAA GAATCATTGTGCATTA TTATATT TTATGCACAATGATTC TTTTTTTATAGCGTT SMU.1037c 986733 - 985855 - | putative histidine kinase TERM 1096 986053 - 986072 + g 70 -5 -4.65747 | GATATTTTTGGTTTG CAGAACAA TTTT TTGATCTG TTTTCTTCAAGATTA SMU.1038c 987425 - 986733 - | putative response regulator SMU.1039c 988391 - 987558 - | putative lipopolysaccharide glycosyltransferase SMU.1040c 989162 - 988407 - | putative oxidoreductase, short-chain dehydrogenase/reductase SMU.1041 989323 - 990069 + | putative ABC transporter, ATP-binding protein TERM 1097 990444 - 990454 + G 74 -5.4 -4.79955 | opp_overlap 990444, overlap 990428 990442 ATTTCGTCTCAAGGA GGAA GTC TTCC TTTTCTTATGCCTAT TERM 1098 990838 - 990852 + G 70 -2.8 -5.07486 | opp_overlap 990838 TAGGAATCACCATAA CTATCA TTT TGTTAG TTTTTATTCAACGTA SMU.1042 990066 - 991673 + | hypothetical protein TERM 1099 991729 - 991703 - T 71 -3.1 -5.1287 | gap 1, opp_overlap 991703 CTCATATGTAAAAAA GAGACTTAGATT TTTT ATTCTA-GTCTC TAGTCTAAGACAAAT TERM 1100 991738 - 991765 + T 91 -7.1 -5.13137 | TAGTCTCTAGTCTAA GACAAATTCCG TTATTT TGGAGTTTGTC TTTTTAGTTTATTTA eutD 992769 - 991774 - | phosphotransacetylase SMU.1044c 993676 - 992786 - | putative pseudouridylate synthase TERM 1101 993443 - 993426 - G 78 -3.5 -5.46698 | TCCAAAATTAAAAAA TGTTCAT CTTC ATAAACA ATATTCAAATCATGC ppnK 994506 - 993673 - | inorganic polyphosphate/ATP-NAD kinase SMU.1046c 995146 - 994481 - | putative GTP pyrophosphokinase TERM 1102 995348 - 995323 - RH 79 -6.9 -4.57073 | opp_overlap 995325, overlap 995325 TAGCTGTGTTAAAAA TGGCAGAAACA TCAA TGCTTCTGCTA CTTGGAAGATTTGAG TERM 1103 995346 - 995325 - RH 74 -9.5 -2.60032 | opp_overlap 995325, overlap 995323 GCTGTGTTAAAAATG GCAGAAACA TCAA TGCTTCTGC TACTTGGAAGATTTG SMU.1047c 995653 - 995546 - | hypothetical protein SMU.1048 995645 - 996211 + | hypothetical protein TERM 1104 996221 - 996231 + FH 74 -4 -5.14949 | opp_overlap 996221 GAATAAACCCAAGGA CAAA GTT TTTG TTTTCTTATTTTATT krpS 996314 - 997294 + | ribose-phosphate pyrophosphokinase SMU.1051 997355 - 998416 + | iron-sulfur cofactor synthesis protein SMU.1052 998418 - 998765 + | hypothetical protein TERM 1105 998942 - 998913 - f 100 -14.5 -3.30441 | gap 1, opp_overlap 998914 998916, overlap 998916 CAGTACCCCTTATAA TTATGACCACCCGT CTA ACGGGTGGTCA-AA TTTGTTATAAAAAAA TERM 1106 998914 - 998942 + F 100 -16.1 -4.30719 | opp_overlap 998913 998916, overlap 998916 AGTACCCCTTATAAT TATGACCACCCGT CTA ACGGGTGGTCAAA TTTGTTATAAAAAAA TERM 1107 998940 - 998916 - f 100 -18.7 -2.8294 | opp_overlap 998914 998916, overlap 998913 TACCCCTTATAATTA TGACCACCCGT CTA ACGGGTGGTCA AATTTGTTATAAAAA TERM 1108 998916 - 998940 + F 100 -18.7 -2.50545 | opp_overlap 998916 998913, overlap 998914 TACCCCTTATAATTA TGACCACCCGT CTA ACGGGTGGTCA AATTTGTTATAAAAA SMU.1053 999061 - 999702 + | redox-sensing transcriptional repressor Rex TERM 1109 999835 - 999852 + G 74 -9.1 -3.39803 | opp_overlap 999834 AGGGGGTTCAGGAAG CTGGCGG TCTA CCGCTAG TTATCCCTATCAGTG TERM 1110 999920 - 999942 + G 79 -4.9 -5.31275 | gap 1, opp_overlap 999913, overlap 999924 TAAACTTATCTTAAC CGGCGGTCAA AATG TTGACC-CTG TTTTTTATGGTGAAG SMU.1054 999726 - 1000421 + | putative glutamine amidotransferase radC 1001047 - 1000418 - | DNA repair protein RadC TERM 1111 1000504 - 1000487 - Gf 72 -4.9 -4.70266 | AATATGATCTAAAAA GACGATT CCTA AATCATC ACAGGATCGTTTTAT SMU.1056 1001046 - 1001165 + | hypothetical protein TERM 1112 1001159 - 1001190 + Tr 93 -6.1 -5.53288 | opp_overlap 1001159 1001183 TTCAAAAAATAAAAA GATTTAGATTTTT CAGGCA AGAAGTCTAAATC TTTTTTTAGATTAAA TERM 1113 1001190 - 1001159 - TR 79 -2.4 -5.75538 | opp_overlap 1001159, overlap 1001183 TTCAAAAAATAAAAA GATTTAGATTTTTC AGGC AAGAAGTCTAAATC TTTTTTTAGATTAAA satE 1001933 - 1001196 - | hypothetical protein satD 1002598 - 1001930 - | hypothetical protein TERM 1114 1001966 - 1001978 + g 78 -3.3 -5.38054 | opp_overlap 1001966 GGCATTTAACAGTAA GGTCG TAG CTACC TTTTTATTTCTGAGG TERM 1115 1002614 - 1002661 + r 100 -24.8 -4.85822 | opp_overlap 1002627 AAAACGCCTCCTTTA GTTTCCATTATAACAGAAATTT ATAA AAATTTCTGTTATAATGGAAAC TTTTATATTTGTCAT TERM 1116 1002648 - 1002627 - R 78 -8.9 -3.4072 | opp_overlap 1002614 TAGTTTCCATTATAA CAGAAATTT ATAA AAATTTCTG TTATAATGGAAACTT satC 1003222 - 1002695 - | hypothetical protein ffh 1004792 - 1003242 - | signal recognition particle protein subunit, Ffh TERM 1117 1003828 - 1003844 + g 83 -6.6 -5.15167 | TTCTCGCGCATTTTT TCAGCT AATTC AGCTGA TTTTTGTTCATCGTA ylxM 1005237 - 1004905 - | hypothetical protein opuAb 1007077 - 1005347 - | putative ABC transporter, proline/glycine betaine permease protein opuAa 1008294 - 1007080 - | putative ABC transporter, ATP-binding protein, proline/glycine betaine transport system TERM 1118 1008249 - 1008271 + g 71 -6.4 -4.06281 | overlap 1008248 GTGCTGCTTTTTGTT TTTTACCAAA AAT TTTGGTGAGA TGTTTTATTTCAAGT TERM 1119 1008366 - 1008327 - R 80 -5.8 -4.95876 | opp_overlap 1008331 AATCATAATTAAAAA CCAACTGACCATATCATT ATAT AATAGTGTGGTCAGTTTG TCAAAAAAGAAGGAG TERM 1120 1008331 - 1008362 + r 72 -7.4 -3.85698 | opp_overlap 1008327 ATAATTAAAAACCAA CTGACCATATCATT ATAT AATAGTGTGGTCAG TTTGTCAAAAAAGAA TERM 1121 1008430 - 1008378 - R 93 -9.5 -4.61482 | gap 1, overlap 1008379 TTTGTCAAAAAAGAA GGAGAGCAAAAGAGAACCTTAA AAAGCAAAAA TCAAGGTTTTCTTTTGCTC-CC AGATAGTCTCATTTA TERM 1122 1008430 - 1008379 - R 89 -11.9 -3.36166 | overlap 1008378 TTGTCAAAAAAGAAG GAGAGCAAAAGAGAACCTTAA AAAGCAAAAA TCAAGGTTTTCTTTTGCTCCC AGATAGTCTCATTTA TERM 1123 1008547 - 1008514 - R 95 -10.6 -4.53047 | opp_overlap 1008513 1008510 1008520, overlap 1008520 AGTAAACACAACAAA TTAAAACTTTGGAA CAGTTC TCCCAAAGTTTTAA ATCGTATTAAGTTAG TERM 1124 1008541 - 1008520 - R 71 -5.2 -4.70353 | opp_overlap 1008520 1008513 1008510, overlap 1008514 CACAACAAATTAAAA CTTTGGAA CAGTTC TCCCAAAG TTTTAAATCGTATTA SMU.1064c 1009199 - 1008567 - | GntR family transcriptional regulator SMU.1065c 1009901 - 1009203 - | GntR family transcriptional regulator TERM 1125 1010166 - 1010133 - g 71 -3.3 -5.15381 | gap 1, overlap 1010136 AAGATATTCAAAAAA TTATCGTACTTGACTA CGG CAGTCA-GTACAATCA GCTGATCGCACGCCG guaA 1010105 - 1011658 + | bifunctional GMP synthase/glutamine amidotransferase protein TERM 1126 1011683 - 1011705 + T 86 -7.1 -4.83169 | gap 1, opp_overlap 1011682 1011675 1011683 CATTAAATGTTAAAT GCCAACA-AC CTTT GTCTGTTGGC TTTTTATACGCACAT TERM 1127 1011751 - 1011726 - T 74 -6.2 -4.36262 | opp_overlap 1011724 ATACGCACATTAAAA CCCTAGTTTT TTATTG AAAGCTAGGG CATAATTATTTCATT SMU.1067c 1012572 - 1011784 - | putative ABC transporter, permease protein SMU.1068c 1013413 - 1012553 - | putative ABC transporter, ATP-binding protein SMU.1069c 1013869 - 1013423 - | hypothetical protein SMU.1070c 1014386 - 1013859 - | hypothetical protein TERM 1128 1013973 - 1013992 + g 80 -8 -4.4727 | opp_overlap 1013972, overlap 1013964 AATTCTTCCATAAGG TTCACTAT TGAA ATAGTGAA TTTTATAGATATTGA TERM 1129 1014505 - 1014490 - R 80 -5.4 -5.18726 | opp_overlap 1014490 1014484 1014501, overlap 1014484 CTCCTATAAGAAAAA GCAAGC CTTG GCTTAC TTTTTAAATTTTATC SMU.1071c 1015401 - 1014550 - | hypothetical protein SMU.1072c 1015941 - 1015450 - | putative acetyltransferase TERM 1130 1015973 - 1016002 + r 77 -7.9 -4.07568 | opp_overlap 1015977, overlap 1015977 ACCTTAAACTAATGA AAAAGCAGGATAG TTCA CTATCCTGCTTAA TTTTAGAACAAGCCA TERM 1131 1015998 - 1015977 - R 100 -13.1 -4.95957 | opp_overlap 1015977 1015973 TAAACTAATGAAAAA GCAGGATAG TTCA CTATCCTGC TTAATTTTAGAACAA TERM 1132 1015977 - 1015998 + r 100 -13.1 -3.66908 | opp_overlap 1015977, overlap 1015973 TAAACTAATGAAAAA GCAGGATAG TTCA CTATCCTGC TTAATTTTAGAACAA fthS 1017675 - 1016005 - | formate--tetrahydrofolate ligase SMU.1074 1017842 - 1018528 + | phosphopantothenate--cysteine ligase TERM 1133 1018722 - 1018710 - g 72 -7.7 -3.76492 | TCGAATGTTATGAAA GAGGA TGA TCCTC AAGTTATTAATCATA dfp 1018521 - 1019060 + | phosphopantothenoylcysteine decarboxylase SMU.1076 1019135 - 1019707 + | hypothetical protein TERM 1134 1019726 - 1019705 - f 83 -5.9 -5.2696 | opp_overlap 1019708, overlap 1019708 TTAAAACTTAAAAAA TAATCACGT GAAA ACGTGATTT TTTTTTATGAAAGTG TERM 1135 1019723 - 1019708 - f 82 -7.6 -4.68528 | opp_overlap 1019708, overlap 1019705 AAACTTAAAAAATAA TCACGT GAAA ACGTGA TTTTTTTTTATGAAA TERM 1136 1019708 - 1019723 + F 100 -7.6 -6.22802 | opp_overlap 1019708 1019705 AAACTTAAAAAATAA TCACGT GAAA ACGTGA TTTTTTTTTATGAAA pgm 1019802 - 1021517 + | putative phosphoglucomutase TERM 1137 1021508 - 1021494 - T 86 -7.2 -4.74706 | GCTAATATCGAAAAA GAAATC AAT GATTTC GTCGGATAGTGCTTC TERM 1138 1021553 - 1021587 + T 74 -2.9 -5.4387 | opp_overlap 1021548 1021553, overlap 1021566 AAGTTAAAATTAAAA TGCTTGAATGACG CGTTTAAAA CGTATTTCAAGCA TTTTTTACTTTATAT SMU.1078c 1023393 - 1021648 - | putative ABC transporter, ATP-binding protein TERM 1139 1021841 - 1021853 + g 70 -6.3 -4.26463 | AGCTTTTCAAATGCT TCTTG GAC CAAGA TTTCTGTTCGTGTAT SMU.1079c 1025123 - 1023390 - | putative ABC transporter, ATP-binding protein SMU.1080c 1025747 - 1025133 - | transposon-like protein SMU.1081c 1026726 - 1025749 - | hypothetical protein glyA 1027985 - 1026723 - | serine hydroxymethyltransferase SMU.1083c 1028585 - 1027995 - | hypothetical protein TERM 1140 1028516 - 1028489 - G 71 -9.4 -2.52104 | gap 1, overlap 1028488 1028486 AAACATTATCAACAG CTCTTTTGCTCAA AGC TTGAGCAAAA-AG ACCATAGACGGTTTC hemK 1029414 - 1028578 - | putative protoporphyrinogen oxidase TERM 1141 1029074 - 1029094 + g 76 -4.7 -5.09259 | CCAATGTCTAAAAGT TTAGCAGAG CTT CTATGCTGA TTTTCTTTTAAGATA prfA 1030490 - 1029411 - | peptide chain release factor 1 kitH 1031134 - 1030550 - | thymidine kinase TERM 1142 1031222 - 1031212 - H 74 -5.4 -4.86731 | opp_overlap 1031212 TTTTGTTAAATAAAA GACA TAT TGTC ATCTTCTTTTTAACA SMU.1087 1031284 - 1031469 + | 4-oxalocrotonate tautomerase TERM 1143 1032175 - 1032148 - g 71 -3.4 -5.09173 | opp_overlap 1032156, overlap 1032111 1032149 1032156 CAAGATCCTAAAAAA CCACGAAACCAA AATA TTGGTATTGTGA AAATTCATGGTCAAT apbE 1031551 - 1032486 + | putative thiamine biosynthesis lipoprotein TERM 1144 1033015 - 1033027 + G 76 -4.8 -5.08601 | CTTGATGCTATCTTT GACG ATTTC CGTC TTTTTGTTAAAATCA SMU.1089 1032511 - 1033113 + | hypothetical protein SMU.1090 1033133 - 1034392 + | hypothetical protein TERM 1145 1034579 - 1034613 + F 90 -9 -4.55295 | opp_overlap 1034577 1034580 1034582, overlap 1034580 AAATCATGATAAACT ATATTATTATTTTAAT GAC ATTAAAATAATAATAA TTTATTTATGAGAGG TERM 1146 1034612 - 1034580 - f 90 -12.5 -3.05238 | opp_overlap 1034580 1034579, overlap 1034577 1034582 AATCATGATAAACTA TATTATTATTTTAAT GAC ATTAAAATAATAATA ATTTATTTATGAGAG TERM 1147 1034580 - 1034612 + F 90 -12.5 -3.32695 | opp_overlap 1034577 1034580 1034582, overlap 1034579 AATCATGATAAACTA TATTATTATTTTAAT GAC ATTAAAATAATAATA ATTTATTTATGAGAG TERM 1148 1034610 - 1034582 - f 83 -10.7 -3.07455 | opp_overlap 1034580 1034579, overlap 1034580 1034577 TCATGATAAACTATA TTATTATTTTAAT GAC ATTAAAATAATAA TAATTTATTTATGAG wapE 1034634 - 1036157 + | cell wall protein, WapE TERM 1149 1036260 - 1036231 - f 74 -9.3 -2.99257 | opp_overlap 1036231, overlap 1036228 CTTCAAAAAAAGCTA CCCTCACTAGG TGCATAAT CCTAGTGGGGG TTTTATAATTGATCA TERM 1150 1036231 - 1036260 + F 100 -11.5 -4.56607 | opp_overlap 1036231 1036228 CTTCAAAAAAAGCTA CCCTCACTAGG TGCATAAT CCTAGTGGGGG TTTTATAATTGATCA TERM 1151 1036657 - 1036640 - g 70 -2.7 -5.11033 | gap 1, overlap 1036642 GATAATGCTAAAAAA GA-GGCTG GAG CAACCGTC AATCTTCAGGTCAGC SMU.1093 1036487 - 1037995 + | putative ABC transporter, permease protein SMU.1094 1038011 - 1038667 + | putative ABC transporter, ATP-binding protein TERM 1152 1038670 - 1038699 + T 93 -9.3 -4.7497 | opp_overlap 1038664 1038670 TACATTAATTTAAAA GCAAGCGGTGG TTTTCTTT TCGCCGCTTGC TTTTTACTAAGTCAG TERM 1153 1038699 - 1038670 - T 70 -6.4 -4.31085 | opp_overlap 1038670, overlap 1038664 TACATTAATTTAAAA GCAAGCGGTG GTTTTCTTTT CGCCGCTTGC TTTTTACTAAGTCAG opuBc 1040306 - 1038786 - | putative choline ABC transporter, osmoprotectant binding protein TERM 1154 1038908 - 1038918 + g 76 -4 -5.26875 | TTTTTCCAGCTAAGC GATT CAG AATC TTTTTTAGTTCAGGA TERM 1155 1039450 - 1039477 + g 75 -6.4 -4.40963 | opp_overlap 1039450, overlap 1039448 TAAATATCAATATCA CCTTTTTTTAGG GCTT CATAAAGAAAGG TTGTTTTTCCAAAAT TERM 1156 1039910 - 1039898 - G 74 -9.1 -3.64915 | CTCCAGAAATGATAA CTGGC ATA GCCAG CGCTAATTCAAATTT opuBa 1041028 - 1040306 - | putative ABC transporter, ATP-binding protein, choline transporter TERM 1157 1040655 - 1040668 + g 77 -8.1 -3.91434 | TCCAAATACTTATCT GCTGG CAAG CCAGC TTTATCAAGTAATTT SMU.1097c 1041507 - 1041025 - | putative transcriptional regulator protein SMU.1098c 1042469 - 1041507 - | putative oxidoreductase TERM 1158 1042547 - 1042519 - R 82 -7.7 -4.56629 | opp_overlap 1042519 1042518 1042524 TATAACATGACAAAA TTAAATAGTCAAA TAT TTTTACTATTTAA GTGTTGTATTAAAAA TERM 1159 1042577 - 1042565 - R 93 -6.3 -5.52384 | opp_overlap 1042565 1042563 GTTGTATTAAAAAAA TTGGA TCA TCCAA TCTTTTAACTCATTA TERM 1160 1042755 - 1042729 - R 71 -5.2 -4.7173 | TATTATACTTAAAAA CCCAAGAG GTAAATTATTT CTCTTGGG AAGCTTTTTGTGTTT SMU.1100c 1043866 - 1042742 - | putative permease TERM 1161 1043921 - 1043938 + r 70 -7.1 -3.59262 | opp_overlap 1043921 1043935 AAATAACTAAAAAAA CAGATTT TTAA AAATCTG TTTCAGAGTGTAGAC TERM 1162 1043938 - 1043921 - R 100 -7.1 -5.73672 | opp_overlap 1043921, overlap 1043935 AAATAACTAAAAAAA CAGATTT TTAA AAATCTG TTTCAGAGTGTAGAC TERM 1163 1043945 - 1043935 - R 71 -5.4 -4.61633 | opp_overlap 1043921, overlap 1043921 ACAGATTTTTAAAAA TCTG TTT CAGA GTGTAGACAAAGTTT TERM 1164 1043996 - 1044023 + r 93 -9.9 -4.36914 | opp_overlap 1043988 GTTCAAATCTTCCAA GTGGCAGAAAC AGTGAA GCTTCTGCCAC TTTTATCACGGCGGA arb 1045687 - 1044251 - | 6-phospho-beta-glucosidase SMU.1104c 1046293 - 1045895 - | phosphoglycerate mutase-like protein SMU.1105c 1046904 - 1046290 - | putative phosphoglycerate mutase-like protein SMU.1106c 1047512 - 1046916 - | phosphoglycerate mutase-like protein SMU.1107c 1048644 - 1048069 - | hypothetical protein TERM 1165 1048748 - 1048762 + r 72 -2.8 -5.37043 | opp_overlap 1048740 1048749, overlap 1048749 TATGATAGCAAAAAA ACTGTT TAA AACAGG TTTTTTGTATGCACT TERM 1166 1048761 - 1048749 - R 93 -6.3 -5.59357 | opp_overlap 1048748 1048749, overlap 1048740 ATGATAGCAAAAAAA CTGTT TAA AACAG GTTTTTTGTATGCAC SMU.1108c 1049588 - 1048776 - | hypothetical protein TERM 1167 1049347 - 1049361 + g 79 -7.2 -4.60487 | opp_overlap 1049346, overlap 1049331 CTTTGCTGGAAAACT TCAATC AAG GATTGA TTTTTAGAAATAATA SMU.1109c 1051056 - 1049803 - | putative integral membrane protein; permease SMU.1111c 1052172 - 1051336 - | hypothetical protein TERM 1168 1052243 - 1052222 - R 100 -13.1 -3.65991 | ACCTTCTGAACAGAA TCGTTGCTG CTAG CAGCAACGA AACTTAAAGGCACTA SMU.1112c 1052796 - 1052392 - | hypothetical protein TERM 1169 1053008 - 1052987 - R 87 -8.8 -4.18762 | opp_overlap 1052987 1052991, overlap 1052991 AAGTCGTACCTAAAA GAAACTCG TTAGAG CGAGTTTC TTATTTTAAAATGAT TERM 1170 1052987 - 1053008 + r 90 -9.5 -4.20148 | opp_overlap 1052987 1052991, overlap 1052991 AAGTCGTACCTAAAA GAAACTCGT TAGA GCGAGTTTC TTATTTTAAAATGAT srtA 1053754 - 1053014 - | putative sortase TERM 1171 1053370 - 1053380 + g 74 -5.4 -4.81083 | AATTATTTTCTCCCA TGAC TTG GTCA TTTTTCATCGTTCCA gyrA 1056238 - 1053761 - | DNA gyrase subunit A TERM 1172 1054275 - 1054251 - G 75 -10.1 -3.01745 | opp_overlap 1054250 1054263 GTTCCAATAATGATA TCCTCTTGACC ATT GGTCAAAAGAA CGTTGATCAATTCAT TERM 1173 1055882 - 1055868 - G 84 -11.4 -3.28712 | CGCGCTTCTGTATAA CGCTGC GCT GCAGCG CCATCTCCGTCCATA TERM 1174 1056694 - 1056676 - g 86 -8.8 -4.62069 | opp_overlap 1056675 1056670, overlap 1056679 GGTGCACCCCAAAAA CCAGGCGA AAC TCGCCTCG ATCTCGTTGGTAAAA TERM 1175 1056691 - 1056679 - g 72 -9.1 -3.25166 | opp_overlap 1056675 1056670, overlap 1056676 GCACCCCAAAAACCA GGCGA AAC TCGCC TCGATCTCGTTGGTA ldh 1056409 - 1057395 + | L-lactate dehydrogenase TERM 1176 1057441 - 1057416 - T 100 -13.5 -4.98758 | opp_overlap 1057416 AAAAATCCATAAAAA TACCAAGCATT GTGT AATGCTTGGTA TTTTTATTAAACGTT TERM 1177 1057416 - 1057441 + T 100 -13.5 -5.08088 | opp_overlap 1057416 AAAAATCCATAAAAA TACCAAGCATT GTGT AATGCTTGGTA TTTTTATTAAACGTT SMU.1116c 1058593 - 1057457 - | hypothetical protein naoX 1060133 - 1058760 - | NADH oxidase (H2O-forming) TERM 1178 1059968 - 1059956 - G 73 -2.6 -5.32882 | TATCAGCATAAAAAA GACC TTGAG GGCC TGATATTTGTTTTCC SMU.1118c 1061329 - 1060373 - | putative ABC sugar transporter, permease protein SMU.1119c 1062407 - 1061331 - | putative sugar ABC transporter, permease protein SMU.1120 1063932 - 1062400 - | putative sugar ABC transporter, ATP-binding protein TERM 1179 1062912 - 1062894 - G 73 -9.6 -2.96329 | opp_overlap 1062896, overlap 1062891 1062896 TTAACTCAAGAATCA GACCATCA CGA TGACGGTC TTCAGGAACATGACC TERM 1180 1064005 - 1063952 - R 100 -15.1 -3.85698 | opp_overlap 1063953 1063970, overlap 1063953 1063970 TTTTCCTTTCAGAAA TTTTATACTTCAGTAAAATCTACTA ATTT TAGTAGATTTTACTGAGATATAAAT ATCTCAGCTTGAAAA TERM 1181 1064004 - 1063953 - R 100 -18.6 -2.91276 | opp_overlap 1063953 1063970, overlap 1063952 1063970 TTTCCTTTCAGAAAT TTTATACTTCAGTAAAATCTACTA ATTT TAGTAGATTTTACTGAGATATAAA TATCTCAGCTTGAAA TERM 1182 1063953 - 1064004 + r 100 -18.6 -2.91681 | opp_overlap 1063952 1063953 1063970, overlap 1063970 TTTCCTTTCAGAAAT TTTATACTTCAGTAAAATCTACTA ATTT TAGTAGATTTTACTGAGATATAAA TATCTCAGCTTGAAA TERM 1183 1063970 - 1063987 + r 76 -7.1 -4.27617 | opp_overlap 1063970 1063953 1063952, overlap 1063953 TATACTTCAGTAAAA TCTACTA ATTT TAGTAGA TTTTACTGAGATATA TERM 1184 1063987 - 1063970 - R 76 -7.1 -4.27617 | opp_overlap 1063953 1063970, overlap 1063953 1063952 TATACTTCAGTAAAA TCTACTA ATTT TAGTAGA TTTTACTGAGATATA TERM 1185 1064039 - 1064023 - R 100 -10.1 -5.03314 | opp_overlap 1064023 1064022 CTCAGCTTGAAAAAA GCGACCG ACA CGATCGC CTTTAAAAGTTTATT SMU.1121c 1065099 - 1064050 - | putative ABC transporter cdd 1065575 - 1065189 - | cytidine deaminase deoC 1066227 - 1065565 - | putative deoxyribose-phosphate aldolase TERM 1186 1065806 - 1065816 + g 72 -5.4 -4.53334 | CCTGCTGCTACTGCA GCTT GAC AAGC TTTAATTTTTTCTTT pdp 1067523 - 1066246 - | pyrimidine-nucleoside phosphorylase SMU.1125c 1068228 - 1067632 - | hypothetical protein TERM 1187 1068775 - 1068785 + G 74 -5.4 -4.70266 | GTTATGATATGGAAC GTCT ATT AGAC TTTTTAGATACTATT coaA 1068324 - 1069244 + | pantothenate kinase rpsT 1069316 - 1069552 + | 30S ribosomal protein S20 TERM 1188 1069579 - 1069550 - T 95 -11.7 -3.74626 | opp_overlap 1069550 1069558 1069574, overlap 1069541 1069558 AGCAAATTAGCCAAA TAAAAAAACCTCA AAAT CGAGGTTTTTTTA TTTATTAAAAATTAA TERM 1189 1069550 - 1069579 + T 100 -11 -4.183 | opp_overlap 1069541 1069550 1069558, overlap 1069558 1069574 AGCAAATTAGCCAAA TAAAAAAACCTC AAAATC GAGGTTTTTTTA TTTATTAAAAATTAA TERM 1190 1069558 - 1069571 + T 90 -3.8 -6.08342 | opp_overlap 1069550 1069541 1069558, overlap 1069550 AGCCAAATAAAAAAA CCTC AAAATC GAGG TTTTTTTATTTATTA TERM 1191 1069571 - 1069558 - T 91 -4.5 -5.96894 | opp_overlap 1069558 1069550, overlap 1069550 1069541 AGCCAAATAAAAAAA CCTCA AAAT CGAGG TTTTTTTATTTATTA ciaH 1070949 - 1069642 - | putative histidine kinase sensor CiaH ciaR 1071613 - 1070939 - | putative response regulator CiaR SMU.1131c 1071927 - 1071664 - | hypothetical protein TERM 1192 1072274 - 1072243 - R 86 -3.9 -5.86976 | TGATAAAACAAAAAA GATTTAATCCTGT TTCCAT ACAAAACTAAATC TTCATTTCAAATTAT pepN 1074877 - 1072328 - | aminopeptidase N, PepN TERM 1193 1073373 - 1073397 + g 76 -5.1 -5.06451 | opp_overlap 1073376, overlap 1073374 1073377 TTTACAGCAGCTAAT TGACTGAAATT AGG AATTTCAATCG TTTTTTCCGATAATA TERM 1194 1074654 - 1074622 - G 79 -9.1 -4.02005 | opp_overlap 1074630 1074639 1074642 AAAATTCAAGAACAA GGGTCATACTGCCTG TCT CAGGCAGTTCAATCC GAACAGCCTCATTTT TERM 1195 1074630 - 1074646 + g 87 -12.3 -3.05384 | opp_overlap 1074622, overlap 1074639 1074642 AGAACAAGGGTCATA CTGCCTG TCT CAGGCAG TTCAATCCGAACAGC phoU 1075571 - 1074918 - | putative phosphate transport system regulatory protein TERM 1196 1075314 - 1075341 + g 85 -12.2 -2.71011 | opp_overlap 1075322, overlap 1075297 1075319 1075322 AATGTCACTTGAGGC CTTAAGGACAGT GATT ACTGTTCTTAAG TCATTAGAAACAGGT SMU.1134c 1076361 - 1075603 - | putative phosphate ABC transporter, ATP-binding protein TERM 1197 1076298 - 1076308 + g 72 -5.4 -4.63527 | CAATAGATACACTAT GAAG GGC CTTC TTTTTACCATAGTAA pstB 1077176 - 1076373 - | putative phosphate ABC transporter, ATP-binding protein pstC 1078079 - 1077192 - | putative phosphate ABC transporter, permease protein pstC1 1079004 - 1078069 - | putative phosphate ABC transporter, permease protein pstS 1079940 - 1079077 - | putative ABC transporter, phosphate-binding protein TERM 1198 1079573 - 1079592 + g 79 -2.2 -5.52023 | CTTAATTGATCAAGG GTTAAATT TGAT ACTTTAAC TTTTTTGTTAGTAAT TERM 1199 1079914 - 1079932 + g 73 -4.6 -4.8622 | CAGGGCTAGCATTGC GAATAAAG TTA CTTTTTTC TTTTTCATTACCCGC SMU.1139c 1081347 - 1080037 - | methylase TERM 1200 1081407 - 1081384 - R 74 -3.9 -5.18561 | opp_overlap 1081384 TAAACAGCCAAAAAA CCTAATTTG ATTTAA CAAATGAGG CTTTTACTTGATGTA SMU.1140c 1082103 - 1081411 - | hypothetical protein SMU.1141c 1082437 - 1082159 - | hypothetical protein TERM 1201 1082400 - 1082370 - G 73 -2.6 -5.22943 | gap 1, opp_overlap 1082379, overlap 1082374 ACCAAATTTAAAAAA GAAAGCACTGAGG TTATCT CTTCAGTGCT-CC ACGACAAATCCAAAG TERM 1202 1082397 - 1082374 - G 83 -6.7 -5.08015 | opp_overlap 1082379, overlap 1082370 AATTTAAAAAAGAAA GCACTGAGG TTATCT CTTCAGTGC TCCACGACAAATCCA spxA 1082843 - 1082430 - | transcriptional regulator Spx SMU.1143c 1083824 - 1082904 - | bifunctional riboflavin kinase/FMN adenylyltransferase truB 1084736 - 1083855 - | tRNA pseudouridine synthase B TERM 1203 1084070 - 1084057 - G 78 -5.3 -5.08255 | ATTGGCAAAAGAAAA GAGAA ATCT TTCTC TTCAACTTTTTCAGC SMU.1145c 1086159 - 1084846 - | putative histidine kinase; homolog of RumK and ScnK SMU.1146c 1086849 - 1086160 - | putative response regulator; homolog of RumR and ScnR SMU.1147c 1087053 - 1086868 - | hypothetical protein SMU.1148 1087165 - 1087932 + | putative transporter, ATP-binding protein; bacteriocin immunity protein SMU.1149 1087932 - 1088672 + | transporter SMU.1150 1088669 - 1089397 + | transporter TERM 1204 1089487 - 1089436 - T 91 -12.6 -3.47345 | opp_overlap 1089436 AAGTCTAGAGCATAA TGATATATCTTCCAATTGTTGAAC AAGC ATCCAACAACTGGGAGACATACCA TATGATCCTAGGCTT SMU.1151c 1090883 - 1089516 - | hypothetical protein SMU.1152c 1091113 - 1090880 - | hypothetical protein TERM 1205 1091272 - 1091258 - R 72 -2.8 -5.47159 | overlap 1091251 TTGGAAGATAAAAAA GAACCA AGA TGACTC TTTTCTAAAACTATT SMU.1153c 1092197 - 1091286 - | hypothetical protein TERM 1206 1091711 - 1091721 + g 71 -6.8 -4.15066 | overlap 1091707 CAGAAGAGATTGTTT GGCA AAC TGCC TTTAATTTCTGGGTA TERM 1207 1092596 - 1092614 + rH 76 -8.8 -3.53012 | overlap 1092598 GTGGGCTCCCTTCCG CCGCGGAA CCA TTCCGCTG TTTAAAACCAGCGCC TERM 1208 1092598 - 1092612 + rH 82 -10 -3.34398 | overlap 1092596 GGGCTCCCTTCCGCC GCGGAA CCA TTCCGC TGTTTAAAACCAGCG SMU.1154c 1092912 - 1092616 - | hypothetical protein SMU.1156c 1093263 - 1092916 - | hypothetical protein SMU.1155 1092763 - 1093218 + | hypothetical protein SMU.1157c 1096667 - 1093482 - | hypothetical protein TERM 1209 1093640 - 1093629 - G 70 -3 -5.07652 | opp_overlap 1093629 GGTTTCAAAATAAAA GAAA TCAT TTTC TAACTTATCATTCTC TERM 1210 1093701 - 1093665 - G 75 -8.3 -3.72027 | opp_overlap 1093665, overlap 1093672 ATTCTCTAGTAACAA CACGAAATATTTTCCTA TGA TAAAAAAATATTTTGTG TTTTCTTGATTCAAG TERM 1211 1093665 - 1093701 + g 77 -6.1 -4.78572 | opp_overlap 1093665 1093672 ATTCTCTAGTAACAA CACGAAATATTTTCCTA TGA TAAAAAAATATTTTGTG TTTTCTTGATTCAAG TERM 1212 1093847 - 1093831 - G 75 -6.7 -4.38927 | opp_overlap 1093830 1093827 TCTCGATACAACAAA TTAGAAA TTG TTTCTAA ATAGTTTACTGTTGA TERM 1213 1094045 - 1094057 + g 73 -2.7 -5.20216 | overlap 1094046 1094051 GATTATCTTCAATTT TTTCT TTT AGAAG TTTTTTAATAATATC TERM 1214 1094692 - 1094711 + g 81 -7.2 -4.82128 | opp_overlap 1094691 1094692 1094694 TCTTCTTCTAAGAAT GATGAACG TCTT TGTTCATC TTTTGTATTTACTAA TERM 1215 1096580 - 1096604 + g 84 -8.8 -4.51799 | opp_overlap 1096583 TAGAAACTCCTGCAC CAACAAAAAT AACTA ATTTTTGTTG TTTTATGGATTTACT SMU.1158c 1097935 - 1096679 - | hypothetical protein TERM 1216 1097912 - 1097902 - G 72 -5.4 -4.67904 | opp_overlap 1097903, overlap 1097903 CATTAATGGTAAAAA CTGT CCC ACAG TGCGGACATTTGATT SMU.1159c 1098187 - 1098023 - | hypothetical protein SMU.1160c 1099252 - 1098230 - | hypothetical protein TERM 1217 1099303 - 1099316 + r 71 -5.3 -4.65512 | GCAAATCATTCCCTT CATCA TTAT TGATG TTTTCTACTTATTTT SMU.1161c 1100071 - 1099325 - | hypothetical protein TERM 1218 1100284 - 1100313 + r 79 -5 -5.31519 | opp_overlap 1100284 GCTTGCTCGCAAAAA GGAGAAAACCTT ATTTTC ATGGTTCTCTCC TTTTTATTTCACTAT TERM 1219 1100313 - 1100284 - R 82 -7.9 -4.56597 | opp_overlap 1100284 GCTTGCTCGCAAAAA GGAGAAAACCTTA TTTT CATGGTTCTCTCC TTTTTATTTCACTAT SMU.1163c 1102094 - 1100349 - | putative ABC transporter, ATP-binding protein TERM 1220 1101914 - 1101896 - G 74 -9.6 -3.16203 | overlap 1101892 1101900 TGAGCACAAGAGACA GCAACAAG ATA CCTGTTGC CTGCCAAATAACCGT SMU.1164c 1103859 - 1102087 - | putative ABC transporter, ATP-binding protein TERM 1221 1103351 - 1103340 - G 84 -5.8 -5.23292 | TGACATAAAATAAAA TGCC GATT GGCA AGGTTAAAAGAGATA SMU.1165c 1104481 - 1103870 - | putative transcription regulator TERM 1222 1104497 - 1104513 + r 70 -8.1 -3.15841 | opp_overlap 1104503 1104506, overlap 1104495 1104506 GGATCATCTCCTTTT TGATAAC ACT GTTATCA TATTGATACCATTAT TERM 1223 1104617 - 1104578 - R 78 -6.6 -4.35926 | overlap 1104581 AGTTTAAATTCAAAA TAATAATGCAAACAGCCT TAAG AAACTGTTTGCACTACAA AACAAGGAACCATTC TERM 1224 1104614 - 1104581 - R 95 -10.5 -4.29139 | overlap 1104578 TTAAATTCAAAATAA TAATGCAAACAGCCT TAAG AAACTGTTTGCACTA CAAAACAAGGAACCA SMU.1166c 1107307 - 1104674 - | putative ABC transporter, permease protein TERM 1225 1106840 - 1106854 + g 70 -7.2 -3.86822 | CACTTTGAACTTTCT TCTCTT TAA AAGAGA TTTCTCAGAAGATTG TERM 1226 1107042 - 1107062 + g 71 -4 -4.93316 | GTCATATCTGTTACT TGGCCAAA GTCTA TTTGGGCA TTTTTGATATTATTC SMU.1167c 1108024 - 1107323 - | putative ABC transporter, ATP-binding protein TERM 1227 1108197 - 1108179 - g 80 -6 -5.10163 | AAGGCCAAAATAAAA GCAGCT ATTACGG AGCTGC TGCTGAAAAATTCAG SMU.1168 1108137 - 1108685 + | putative transcriptional regulator SMU.1169c 1109372 - 1108809 - | putative thioredoxin family protein ccdA 1110099 - 1109386 - | putative cytochrome C biogenesis protein TERM 1228 1109534 - 1109508 - G 70 -5 -4.56597 | overlap 1109489 TTTGTTTCTTAAAAA CGCTCATTACCC TTT GCGAAAAGAGCG CAATCAAAGCAAAGG TERM 1229 1110301 - 1110325 + r 77 -10.1 -2.58418 | opp_overlap 1110303, overlap 1110300 1110299 1110303 TGTTTTAATGCTAAG CACGAAACTTT TCA AACGTTTCGTG AATTTTATCTGCCAC SMU.1171c 1111066 - 1110296 - | hypothetical protein TERM 1230 1110833 - 1110816 - G 70 -6.3 -4.29176 | gap 1, opp_overlap 1110816 AGAGCCAAGTCAAAA GCCCGATG ATT CAT-GGGC TTTTCCAAAATTAAT TERM 1231 1111154 - 1111117 - R 70 -4.1 -4.96848 | gap 1, opp_overlap 1111134 CTCTTCATACAAAAA GAGTGG-CATAAGCGAAC GAA GACCGCTTCTTTCCACTC TTTTATCTTTACTCC SMU.1172c 1111903 - 1111163 - | hypothetical protein TERM 1232 1111261 - 1111245 - G 71 -6.5 -4.10672 | GCAATCGAAATGAAA CTACCAG TAG CAGGTAG GAGATTAAGGTTGTT cysD 1113230 - 1111917 - | putative O-acetylhomoserine sulfhydrylase pcrA 1115712 - 1113511 - | ATP-dependent DNA helicase TERM 1233 1113896 - 1113886 - G 71 -6.8 -4.15788 | opp_overlap 1113885 AATTTCCTGAATAAA GCGA CTT TCGC GATTGTAGCTAGTAC TERM 1234 1115437 - 1115421 - G 70 -5.1 -4.66264 | opp_overlap 1115420 1115423, overlap 1115423 TAAAATTCTTAAAAA TACGCTT CAT AAGCGTG CGTTGTTCACCGGGA TERM 1235 1115435 - 1115423 - G 74 -7.7 -3.9318 | opp_overlap 1115423 1115420, overlap 1115421 AAATTCTTAAAAATA CGCTT CAT AAGCG TGCGTTGTTCACCGG TERM 1236 1115722 - 1115732 + H 74 -6.8 -4.18164 | opp_overlap 1115721 1115722 TGCCATAATCAAAAG CGGA CCT TCCG TTGTTTTCACAGCTT TERM 1237 1116090 - 1116116 + H 77 -3.9 -5.38497 | gap 2, overlap 1116078 TATCTTCTAACTCTA GAGGTATCGTCAA GTA TTGAC-A-ACCTC TTTTTTGATTTCCAT SMU.1175 1116158 - 1117522 + | putative sodium/amino acid (alanine) symporter TERM 1238 1117509 - 1117533 + F 83 -5.7 -5.28983 | opp_overlap 1117509 1117504 TCATTAAAACTAAAA CAAGGTTAGGA TAA TCCCAGTCTTG TTTTTCTATTTTCAA TERM 1239 1118068 - 1118056 - g 86 -7.7 -4.86862 | overlap 1118060 TCGAAAAAATTAAAA TCAGG CGC CCTGA TGGCTGCAGCAAAAG SMU.1176 1117621 - 1118811 + | putative cation efflux transporter TERM 1240 1118855 - 1118899 + T 95 -8.9 -5.15381 | gap 1, opp_overlap 1118855 TAAAATAATCAAAAA CGAATGACTTTAGAT-AAGC CAACAA GCTTTATCTGAAATCATTCG TTTTTTAACTCTCTT TERM 1241 1118899 - 1118855 - T 100 -9.6 -5.07971 | gap 1, opp_overlap 1118855 TAAAATAATCAAAAA CGAATGACTTTAGATAA-GCC AACA AGCTTTATCTGAAATCATTCG TTTTTTAACTCTCTT SMU.1177c 1119767 - 1118934 - | putative ABC transporter, glutamine binding protein SMU.1178c 1120418 - 1119789 - | putative amino acid ABC transporter, ATP-binding protein TERM 1242 1119861 - 1119875 + g 70 -2.8 -5.1417 | opp_overlap 1119861, overlap 1119846 GTGTGTCACAACAAT TTGTGT GAT ACCCAA TTTTTGATTTTGTAA TERM 1243 1120248 - 1120261 + g 76 -5.3 -5.0133 | opp_overlap 1120244, overlap 1120245 ATCATCATAGATGAC TTGAC CAGA GTCAA TTTTTTCCAGCCCTG SMU.1179c 1121068 - 1120427 - | putative amino acid ABC transporter, permease protein phnA 1121591 - 1121259 - | putative alkylphosphonate uptake protein mtlD 1122914 - 1121766 - | mannitol-1-phosphate 5-dehydrogenase TERM 1244 1121843 - 1121873 + g 70 -7.1 -3.75332 | gap 1, opp_overlap 1121843, overlap 1121833 TTACTTCTTTAACAA CTGCTTTTA-AAGA CTTT TCTTGTAGAAGCAG TTTAAGTTGAACACT mtlA2 1123367 - 1122930 - | PTS system, mannitol-specific enzyme IIA SMU.1184c 1125321 - 1123369 - | putative transcriptional regulator, antiterminator TERM 1245 1123889 - 1123904 + g 73 -4 -5.14965 | TGCTTATTTGTCTGC TCATCG CGAA TGATGA TTTTTTGATGAGCCT TERM 1246 1125287 - 1125262 - G 73 -9.8 -2.52676 | CATCTGTTTAAGCGA CAGCTTCCCA TAATTT TGGAAAGCTG CTAATAAGTGTTTTT mtlA1 1127060 - 1125351 - | PTS system, mannitol-specific enzyme IIBC component TERM 1247 1127216 - 1127180 - R 79 -6.7 -4.63932 | opp_overlap 1127182 1127186, overlap 1127181 1127182 1127186 CATTTTCTAATAAAA CTCAAATTTTGGCACAA AAG TTTTGCCAAAATTTGTT ATCCTAAGCGGAAGA TERM 1248 1127215 - 1127181 - R 84 -10.2 -3.37877 | opp_overlap 1127182 1127186, overlap 1127180 1127182 1127186 ATTTTCTAATAAAAC TCAAATTTTGGCACAA AAG TTTTGCCAAAATTTGT TATCCTAAGCGGAAG TERM 1249 1127182 - 1127214 + r 100 -13.7 -3.40403 | opp_overlap 1127182 1127181 1127180 1127186, overlap 1127186 TTTTCTAATAAAACT CAAATTTTGGCACAA AAG TTTTGCCAAAATTTG TTATCCTAAGCGGAA TERM 1250 1127214 - 1127182 - R 100 -13.7 -2.62244 | opp_overlap 1127182 1127186, overlap 1127181 1127180 1127186 TTTTCTAATAAAACT CAAATTTTGGCACAA AAG TTTTGCCAAAATTTG TTATCCTAAGCGGAA TERM 1251 1127210 - 1127186 - R 82 -8.7 -3.99986 | opp_overlap 1127182 1127186, overlap 1127182 1127181 1127180 CTAATAAAACTCAAA TTTTGGCACAA AAG TTTTGCCAAAA TTTGTTATCCTAAGC TERM 1252 1127186 - 1127210 + r 88 -8.7 -4.35483 | opp_overlap 1127186 1127182 1127181 1127180, overlap 1127182 CTAATAAAACTCAAA TTTTGGCACAA AAG TTTTGCCAAAA TTTGTTATCCTAAGC TERM 1253 1127563 - 1127593 + r 100 -14.3 -3.74178 | opp_overlap 1127563, overlap 1127568 AACAGCCCAAAAAAA CCAAAGAAAAATC AAGTA GATTTTTCTTTGG TTTAAGATTTAGTTC TERM 1254 1127593 - 1127563 - R 100 -14.3 -5.46629 | opp_overlap 1127563 1127568 AACAGCCCAAAAAAA CCAAAGAAAAATC AAGTA GATTTTTCTTTGG TTTAAGATTTAGTTC TERM 1255 1127568 - 1127588 + r 71 -7 -4.08919 | opp_overlap 1127563, overlap 1127563 CCCAAAAAAACCAAA GAAAAATC AAGTA GATTTTTC TTTGGTTTAAGATTT glmS 1129422 - 1127608 - | D-fructose-6-phosphate amidotransferase TERM 1256 1128037 - 1128058 + g 70 -5.9 -4.22214 | overlap 1128038 AAAAGCATTACGTGA TGTTGCTAA AAGA TTAGCAACC TTCTTTTCAATAACT TERM 1257 1128038 - 1128057 + g 74 -9.4 -3.12605 | overlap 1128037 AAAGCATTACGTGAT GTTGCTAA AAGA TTAGCAAC CTTCTTTTCAATAAC TERM 1258 1129600 - 1129584 - R 100 -7.3 -5.50499 | opp_overlap 1129584 TGACATTTAAAAAAA GAGTAGC TGT ACTACTC TTTCGAAACAAATCC lepB 1130149 - 1129595 - | putative signal peptidase TERM 1259 1130227 - 1130205 - R 81 -2 -6.01369 | opp_overlap 1130205 1130211, overlap 1130211 1130224 TAAAGAAGAAAAAAA GCAAGACTTA TCA TAAGTATTCC TTAATTTTCACCAAA SMU.1189c 1130470 - 1130228 - | hypothetical protein TERM 1260 1130743 - 1130717 - R 100 -7.4 -5.65496 | TATTAAAAATAAAAA GTGTAAAAGATT GAA AGTCTTTCACAC TTAAACTTAAATTCA pykF 1132263 - 1130761 - | pyruvate kinase pfkA 1133350 - 1132337 - | 6-phosphofructokinase dnaE 1136537 - 1133433 - | DNA polymerase III DnaE TERM 1261 1133566 - 1133552 - G 70 -8.6 -3.14307 | AGTAATGTAAAACTA CTGGAA TAT TTCCAG GGTAAGCTGCTAAAA TERM 1262 1133723 - 1133736 + g 73 -3.9 -5.09245 | AATAATAAATCGTTT TTTCT GTTA AGAAA TTTTTGTACTTTTGA TERM 1263 1134580 - 1134598 + g 75 -3.2 -5.22039 | overlap 1134580 AACTGATCAGCACCC TGCAAAAA ATC TTTTTCCA TTTTTTGCATTTCAA TERM 1264 1135725 - 1135705 - G 81 -7 -4.73828 | ACAATCAAAAAATAA TCATCAAA GCCCA TTTGATGA ATGACAGCCAATTCA SMU.1193 1136715 - 1137086 + | putative transcriptional regulator SMU.1194 1137083 - 1137790 + | putative ABC transporter, ATP-binding protein SMU.1195 1137800 - 1138618 + | permease SMU.1196c 1139291 - 1138671 - | hypothetical protein TERM 1265 1139563 - 1139587 + H 76 -6.5 -4.64992 | GATCACACAGGCTGG TTTTTAGGCAG CTA CTGCGTAAGAA TTTGTATTTTTTGCA SMU.1197 1139764 - 1140378 + | hypothetical protein TERM 1266 1140381 - 1140398 + T 74 -2 -5.67967 | gap 1, opp_overlap 1140376 1140381 ATTTCATAAGTAAAA GCAG-CT TTGAT AGACTGC TTTTTTTATAATCAT TERM 1267 1140849 - 1140820 - T 100 -15.3 -5.19879 | opp_overlap 1140829 CTTGAAATATAAAAA CCTTCTAAATCTT AAAA AAGATTTAGAAGG GAATAAAATTCAATT rpsA 1142083 - 1140884 - | 30S ribosomal protein S1 SMU.1201c 1142745 - 1142584 - | hypothetical protein TERM 1268 1142873 - 1142847 - R 81 -3.1 -5.71712 | gap 1, overlap 1142852 TTTTACACAAAAAAA TAA-AAGCTTGC AAGA GCAAGCTCGCTA ATTATTTAGTCATCA TERM 1269 1142867 - 1142852 - R 100 -9 -5.61277 | overlap 1142847 CACAAAAAAATAAAA GCTTGC AAGA GCAAGC TCGCTAATTATTTAG ilvE 1143904 - 1142879 - | branched-chain amino acid aminotransferase parC 1146603 - 1144147 - | DNA topoisomerase IV subunit A SMU.1205c 1147284 - 1146796 - | hypothetical protein SMU.1206c 1147944 - 1147387 - | hypothetical protein fic 1148667 - 1148062 - | mobilization/cell filamentation proteins SMU.1208c 1149467 - 1148712 - | hypothetical protein TERM 1270 1149217 - 1149239 + g 73 -9.2 -3.04715 | overlap 1149216 1149233 1149235 GAGAGAGAGCTGTCT CTAGCTGC ATCGGCA GCAGCTAG CTTTTCAGACAGCTG TERM 1271 1149490 - 1149508 + r 70 -7.4 -3.57867 | TTACATCATTTAGTT TGGGTGAG GGG CTCACCAA TTAGATTTTTTATTC TERM 1272 1149746 - 1149728 - R 73 -4.6 -5.07011 | opp_overlap 1149732 GAGAGAAATCAAAAA TTAAGGGA TAA TTCCTTAA TAATAATCATAAACA SMU.1209c 1151083 - 1149743 - | hypothetical protein TERM 1273 1150089 - 1150071 - G 79 -6 -4.93296 | opp_overlap 1150069 1150071 1150071 CTATTATCAGAAAAA GCATAGAA TGC TTCTTTGC TATTTTTCGAATTAT TERM 1274 1150780 - 1150802 + g 70 -4.8 -4.63527 | TATTGAGTTCAACAG GCATCTTTTG TTT CTCAAGATGC TTTTTAAGCTCATCA parE 1153048 - 1151099 - | DNA topoisomerase IV subunit B TERM 1275 1151311 - 1151323 + g 74 -9.1 -3.62491 | GACCCTTGTAGCGCT GGAGC ATA GCTCC TTTACCAAATTTTTT TERM 1276 1151982 - 1151970 - G 74 -7.7 -3.92324 | TGCTCTAACACCAAA CCATC AAC GATGG GACGGGCTAAGGGAC TERM 1277 1152562 - 1152579 + g 70 -8.5 -3.32769 | overlap 1152565 ACTTGGGAGCCTTGC CAACCTT CTCC AAGGTTG TTGCTGGTTTGCCAC SMU.1211 1153161 - 1153799 + | putative glycerol-3-phosphate acyltransferase PlsY TERM 1278 1153833 - 1153805 - T 71 -6.8 -4.04813 | opp_overlap 1153806, overlap 1153803 1153806 AACACATTAAAAAGA GTTCCCTCAATC GAAAT AATTGAGGGAAT TTTTACGCGTTTAAG TERM 1279 1153832 - 1153806 - T 83 -10.3 -3.01261 | opp_overlap 1153806, overlap 1153805 1153803 ACACATTAAAAAGAG TTCCCTCAATC GAAAT AATTGAGGGAA TTTTTACGCGTTTAA TERM 1280 1153806 - 1153832 + T 93 -9.6 -4.64657 | opp_overlap 1153805 1153803 1153806 ACACATTAAAAAGAG TTCCCTCAAT CGAAATA ATTGAGGGAA TTTTTACGCGTTTAA SMU.1213c 1156100 - 1153986 - | putative 5'-nucleotidase precursor TERM 1281 1155490 - 1155478 - G 70 -6.3 -4.21936 | CTGATAATTGGAAAA TCAAG TTT CTTGA CCAAAGTCTTTAATT pyrC 1157554 - 1156286 - | dihydroorotase ung 1158217 - 1157564 - | uracil-DNA glycosylase SMU.1216c 1158893 - 1158240 - | putative amino acid ABC transporter, permease protein TERM 1282 1159048 - 1159002 - R 83 -4.4 -5.64274 | opp_overlap 1159010 1159010 1159013, overlap 1159009 1159013 CCAGTTACAAAAAAA GACAAAACTAAGGCGATCTCTT GAA AAGAGATCGCCTGCTATTAATC AACGTCAGAAATATC TERM 1283 1159039 - 1159009 - R 95 -8.5 -5.11475 | gap 2, opp_overlap 1159010 1159010 1159013, overlap 1159002 1159013 CAAAAAAAGACAAAA CTAAGGCGATCTCTT GAA AAGAGATCGCCT--G CTATTAATCAACGTC TERM 1284 1159010 - 1159042 + r 70 -8 -3.15544 | gap 2, opp_overlap 1159009 1159002 1159013, overlap 1159010 1159013 AAAAAAAGACAAAAC TA--AGGCGATCTCTT GAA AAGAGATCGCCTGCTA TTAATCAACGTCAGA TERM 1285 1159010 - 1159040 + r 84 -11.2 -3.14051 | opp_overlap 1159009 1159002 1159013, overlap 1159010 1159013 AAAAAAAGACAAAAC TAAGGCGATCTCTT GAA AAGAGATCGCCTGC TATTAATCAACGTCA TERM 1286 1159013 - 1159037 + r 100 -17.3 -2.77523 | opp_overlap 1159009 1159002 1159013, overlap 1159010 1159010 AAAAGACAAAACTAA GGCGATCTCTT GAA AAGAGATCGCC TGCTATTAATCAACG TERM 1287 1159037 - 1159013 - R 100 -17.3 -3.86208 | opp_overlap 1159013 1159010 1159010, overlap 1159009 1159002 AAAAGACAAAACTAA GGCGATCTCTT GAA AAGAGATCGCC TGCTATTAATCAACG SMU.1217c 1159894 - 1159043 - | putative ABC transporter, amino acid binding protein TERM 1288 1159434 - 1159447 + g 83 -3.7 -5.53288 | opp_overlap 1159428, overlap 1159429 1159428 ATATAATTAGTGCTG GCAGC TCCG GCAGC TTTTTTTCCCTTAAG TERM 1289 1159868 - 1159849 - G 73 -4.2 -5.00765 | overlap 1159851 AAGCAACTAGAAAAA CAGCCGCT AGCA AGAGGCTA AAAGTCATGAAAAAA nylA 1161451 - 1160009 - | amidase SMU.1219c 1161852 - 1161511 - | hypothetical protein TERM 1290 1161910 - 1161885 - R 74 -7.6 -3.85133 | opp_overlap 1161885, overlap 1161883 TTAAATAGCAAAAGA GAGGTTAAGG TCACAT CCTTAGCCTC TTTATCTTCTTTTCA TERM 1291 1161885 - 1161910 + r 91 -9.8 -4.45253 | opp_overlap 1161885 1161883 TTAAATAGCAAAAGA GAGGTTAAGG TCACAT CCTTAGCCTC TTTATCTTCTTTTCA SMU.1220c 1162526 - 1162026 - | hypothetical protein TERM 1292 1162867 - 1162879 + r 89 -7.7 -4.96468 | ATTATTTTAGTCTTG CCAAG TCT CTTGG TTTTCTTTAAATTTC pyrE 1163487 - 1162858 - | orotate phosphoribosyltransferase pyrF 1164280 - 1163588 - | orotidine 5'-phosphate decarboxylase pyrDB 1165202 - 1164273 - | dihydroorotate dehydrogenase 1B TERM 1293 1165144 - 1165132 - G 84 -9.1 -4.37711 | overlap 1165135 TGACCAAAGCCAAAA CAGCC TGA GGCTG GAATGATAGGATTTT pyrK 1165988 - 1165212 - | dihydroorotate dehydrogenase electron transfer subunit TERM 1294 1166033 - 1166012 - H 100 -7.3 -5.86061 | TTCTATGAAAAAAAA CCTTACCAA CTAA CTGGCAAGG TTACACAAAAAAGTG TERM 1295 1166175 - 1166153 - H 91 -5.6 -5.72207 | opp_overlap 1166153, overlap 1166154 TTGAAATGAAAAAAA TGTCAACTAA GAA TCAGTTGACG TATATGTCTGCAATC TERM 1296 1166174 - 1166154 - H 85 -9.1 -4.01698 | opp_overlap 1166153, overlap 1166153 TGAAATGAAAAAAAT GTCAACTAA GAA TCAGTTGAC GTATATGTCTGCAAT cpsY 1166241 - 1167149 + | putative transcriptional regulator TERM 1297 1167181 - 1167160 - T 76 -6.5 -4.70266 | opp_overlap 1167160 AATAGTATGCAAAAA GGCGACAGC TGCA ACTGTTGCC TTTTTTATTATAAAC TERM 1298 1167160 - 1167181 + T 100 -8 -5.55769 | opp_overlap 1167160 AATAGTATGCAAAAA GGCGACAG CTGCAA CTGTTGCC TTTTTTATTATAAAC SMU.1226c 1167982 - 1167215 - | hypothetical protein TERM 1299 1167391 - 1167358 - G 70 -9.1 -3.21099 | gap 1 CTGTCGTACGATGAA GCTCTTCTTCATCAAA AGG TTTGAT-AAGATGAGC CAGAGGATTTCGTAC deoD 1168688 - 1167984 - | putative purine nucleoside phosphorylase SMU.1228c 1169612 - 1168902 - | glutamine amidotransferase punA 1170431 - 1169622 - | purine nucleoside phosphorylase SMU.1230c 1170918 - 1170442 - | hypothetical protein SMU.1231c 1171132 - 1171037 - | hypothetical protein SMU.1232c 1171456 - 1171241 - | hypothetical protein deoB 1172669 - 1171458 - | phosphopentomutase TERM 1300 1171532 - 1171516 - G 71 -9.5 -2.69601 | overlap 1171513 TCTACACCAAAGTTA TCAGCAA TCG TTGCTGA AATATCAGCGTAATG rpiA 1173401 - 1172724 - | ribose-5-phosphate isomerase A TERM 1301 1172938 - 1172948 + g 75 -3.2 -5.252 | TATTCGCGAAAAGAA GGTT TAT AGCC TTTTTTCTCAAACTC trmE 1173530 - 1174897 + | tRNA modification GTPase TrmE TERM 1302 1174953 - 1174930 - T 77 -3 -5.5762 | opp_overlap 1174923, overlap 1174917 ATTAAATATAAAAAA GGTCGGAACA CTTT TGCCCCATCC TTTTTTATCTTATTC SMU.1236c 1175848 - 1175045 - | hypothetical protein SMU.1237c 1176216 - 1175866 - | hypothetical protein TERM 1303 1176234 - 1176255 + r 93 -8.9 -4.81814 | overlap 1176231 ACAACCTCCTTTTTA TTGTTCAAT AATT ATTGAACAA TTTTATTATAATACT SMU.1238c 1177324 - 1176737 - | hypothetical protein pepV 1178809 - 1177397 - | dipeptidase PepV TERM 1304 1178145 - 1178134 - G 79 -5.8 -5.00616 | opp_overlap 1178124 1178134 1178133 TCGTTGCTGAAAAAA CAGC TGTT GCTG ATTCTGGTACCATGT TERM 1305 1178675 - 1178658 - G 85 -7.1 -5.03314 | GCCATTTTCAAAAAA TGTTCAA GAGC TTGAACA GGGCCGGGCCCAAAA SMU.1240c 1179426 - 1178824 - | putative nitroreductase TERM 1306 1179242 - 1179265 + g 76 -3.9 -5.19879 | gap 1, opp_overlap 1179242, overlap 1179252 TCCTTATTTAAAGCA GGCAGGTCTT CAGCC AAGGC-TGCC TTTTTATCTTTAACA uvrC 1181360 - 1179573 - | excinuclease ABC subunit C TERM 1307 1179617 - 1179642 + g 70 -8.3 -3.25986 | TCTCTTGAATGTTCT CTGCGACATTT TTTG GAATGCCGCAG TTGATAATATCATCT TERM 1308 1180266 - 1180276 + g 77 -6.8 -4.6644 | TCCAATATTTTCAAT CGCA CCA TGCG TTTTTCGAATATCTT TERM 1309 1180369 - 1180379 + g 75 -8.2 -3.8505 | AACTGCTTCTTCTCG CCGC GCT GCGG TTTGATAATCTTAGT TERM 1310 1181828 - 1181842 + G 83 -7.2 -5.00616 | GCTAGCCTATGCTTT TATTGC TCT GCAATA TTTTTTAAAAGGGAA SMU.1243 1181478 - 1182548 + | putative low temperature requirement A protein TERM 1311 1182668 - 1182644 - T 90 -5.7 -5.68039 | AAATCTATAAAAAAA CTGAGTCCATT ATG AACAGTCTCAG CTTTTTCGTACTAAT SMU.1245c 1183222 - 1182665 - | hypothetical protein SMU.1246c 1183870 - 1183574 - | putative transcriptional regulator TERM 1312 1183913 - 1183894 - R 82 -7.8 -4.64766 | opp_overlap 1183894 1183892 1183888 CTTATATCTTAAAAA GCGCACCC TTTT AGATGCGC TCTTTGTTTTAAATA eno 1185232 - 1183934 - | phosphopyruvate hydratase TERM 1313 1184530 - 1184550 + g 73 -8.3 -3.70076 | opp_overlap 1184514, overlap 1184514 1184533 1184547 CAAGGAAGACTTCTT CACCTGGTT TGT AACCAGCTG TTTCAATAGCTTTGA SMU.1249c 1186270 - 1185629 - | hypothetical protein TERM 1314 1186247 - 1186257 + g 78 -5.4 -5.14698 | AATGCCAAGGACTTT CCAA ACA TTGG TTTTATTTTCCATTT SMU.1250c 1186577 - 1186308 - | hypothetical protein TERM 1315 1186554 - 1186564 + g 78 -5.4 -5.11836 | AATTCCTAGAACCTG CCAA ACA TTGG TTTTATTTTCCATCT SMU.1251 1186726 - 1187178 + | hypothetical protein grk 1188367 - 1187255 - | putative glycerate kinase SMU.1253c 1188803 - 1188378 - | hypothetical protein SMU.1254 1188892 - 1189536 + | hypothetical protein TERM 1316 1189544 - 1189570 + T 100 -13.8 -4.62069 | opp_overlap 1189544 TTTTATAACAAAAAA CTCTGAGCAGCT CCT ATCTGCTCAGAG TTTTTGCAATAAAGA TERM 1317 1189570 - 1189544 - T 100 -13.8 -5.55769 | opp_overlap 1189544 TTTTATAACAAAAAA CTCTGAGCAGCT CCT ATCTGCTCAGAG TTTTTGCAATAAAGA SMU.1255c 1189788 - 1189531 - | hypothetical protein SMU.1256c 1190163 - 1189999 - | hypothetical protein SMU.1257c 1190827 - 1190156 - | hypothetical protein SMU.1258c 1191612 - 1190950 - | restriction endonuclease SMU.1259 1191675 - 1192001 + | restriction endonuclease TERM 1318 1192321 - 1192342 + T 93 -9.5 -4.72386 | opp_overlap 1192321 AATACTATCAAAAAA GCTGTCAAA AATG TTTGGCAGC TTTTTGAATGATTTA TERM 1319 1192342 - 1192321 - T 91 -7.3 -5.2112 | opp_overlap 1192321 AATACTATCAAAAAA GCTGTCAAA AATG TTTGGCAGC TTTTTGAATGATTTA SMU.1260c 1192534 - 1192355 - | hypothetical protein SMU.1261c 1192732 - 1192547 - | putative phosphoribosyl-ATP pyrophosphohydrolase TERM 1320 1192805 - 1192817 + r 72 -4.8 -4.89521 | opp_overlap 1192805 ATAATTAGTATAGGA CCCT TCCTT AGGG TTTTCTTTGCGATCT SMU.1262c 1194152 - 1192812 - | hypothetical protein hisI 1194595 - 1194266 - | putative phosphoribosyl-ATP pyrophosphatase / phosphoribosyl-AMP cyclohydrolase hisF 1195350 - 1194595 - | putative imidazoleglycerol-phosphate synthase, cyclase subunit hisA 1196072 - 1195353 - | 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase TERM 1321 1196029 - 1196011 - G 73 -7.4 -4.07568 | opp_overlap 1196026, overlap 1196025 GTCTCTTGCTCAAAA TCCCCCTT GAC AAGGCGGA CAGCATGACCGTTTT TERM 1322 1196026 - 1196040 + g 74 -5.6 -4.81551 | opp_overlap 1196011 1196025 TCCCCCTTGACAAGG CGGACA GCA TGACCG TTTTTAATATCGATA TERM 1323 1196177 - 1196202 + r 88 -9.1 -4.19648 | ATGCTTTTAGCTCGG GTTCAGTTCGA AAAA TCTAACTGAAC TTTCCTTTCTATATA TERM 1324 1196247 - 1196233 - R 77 -10 -2.62192 | overlap 1196232 GTTTAGTCAAGTAAG CGAGCT TTT AGCTCG AACTCATTTCCTTTC TERM 1325 1196323 - 1196348 + r 88 -9.1 -4.19648 | TTTAGCTCGGGTTCA GTTCAGTTCGA AAAA TCTAACTGAAC TTTCCTTTCTATATA TERM 1326 1196393 - 1196379 - R 77 -10 -2.62192 | overlap 1196378 GTTTAGTCAAGTAAG CGAGCT TTT AGCTCG AACTCATTTCCTTTC hisH 1197117 - 1196512 - | imidazole glycerol phosphate synthase subunit HisH SMU.1267c 1197476 - 1197114 - | hypothetical protein hisB 1198067 - 1197483 - | imidazoleglycerol-phosphate dehydratase serB 1198711 - 1198064 - | putative phosphoserine phosphatase hisD 1199981 - 1198698 - | histidinol dehydrogenase hisG 1200625 - 1199978 - | ATP phosphoribosyltransferase catalytic subunit TERM 1327 1200385 - 1200403 + g 75 -7.5 -4.07568 | CCAAGTAACCTGTCG GATGTTC GATCA GAACATC TTTTCCCACAACACC hisZ 1201597 - 1200635 - | putative histidyl-tRNA synthetase hisC 1202643 - 1201594 - | histidinol-phosphate aminotransferase TERM 1328 1202700 - 1202672 - R 100 -16.1 -5.13521 | AAACTATTCAAAAAA GCGCCCTTGCAAA AAA CTTGCAAGGACGC TGACACACACGTGGT TERM 1329 1202757 - 1202771 + r 72 -8.6 -3.14602 | opp_overlap 1202747, overlap 1202747 1202755 CAAGACTACCCTCAG GGAGTT TGA AACTCC TATTCGTAACGTGAA TERM 1330 1203053 - 1203074 + r 83 -4.4 -5.64421 | opp_overlap 1203053 CTCTTATTCAAAAAA GCAACGGT ATCAAA ACCGTTAC TTTTTTGTTTGAGCT TERM 1331 1203074 - 1203053 - R 85 -6.6 -5.08824 | opp_overlap 1203053 CTCTTATTCAAAAAA GCAACGGT ATCAAA ACCGTTAC TTTTTTGTTTGAGCT TERM 1332 1203085 - 1203111 + r 82 -9.5 -3.58329 | gap 1, overlap 1203104 GTTACTTTTTTGTTT GAGC-TGGGGCA CTAT TGTCCCAAGCTC TTGGTTATTAATTGA TERM 1333 1203779 - 1203751 - R 100 -13.3 -4.27886 | TCTTAAATATAGAAA GAGTTTGAGACAA AAG TCGTCCCAAACTC TCAATCTATACAGCA SMU.1276c 1205541 - 1203817 - | septation ring formation regulator EzrA TERM 1334 1204281 - 1204291 + g 71 -6.8 -4.19276 | AGCTATCTAATTTCT GACG TGC CGTC TTTTCAACATTTTCA TERM 1335 1204299 - 1204309 + g 73 -4 -5.09173 | GTGCCGTCTTTTCAA CATT TTC AATG TTTTTTAAGCTATTA gyrB 1207589 - 1205637 - | DNA gyrase subunit B SMU.1278c 1208173 - 1207589 - | hypothetical protein TERM 1336 1208610 - 1208590 - R 70 -6.2 -4.24948 | opp_overlap 1208590 TTAGTATATCGAAAA GAGCCTTA ACTTG TAAGACTC TCCTTTTTGATATGA SMU.1279c 1209821 - 1208595 - | putative cell division protein (cell shape determining protein) SMU.1280c 1211146 - 1210028 - | hypothetical protein TERM 1337 1210438 - 1210419 - G 72 -2.2 -5.26119 | gap 1 GTTTTAAAAATAAAA GCTA-AAAC TGG GTTCATAGC AATGGTCAGAGCATC TERM 1338 1210545 - 1210533 - G 72 -5.5 -4.59342 | overlap 1210534 CGCATGACAAAGAAA CCTCC CCA GGAGA GTCCCAAAGCTGCCA SMU.1282 1211285 - 1211851 + | putative transcriptional regulator TERM 1339 1211904 - 1211953 + T 82 -11.2 -2.53249 | gap 2, opp_overlap 1211909, overlap 1211909 CACCCAGAAAATAAC AAAAAGCACTGTTTTAAGCAGAAA AGTT TTTCTGCTT-AA-CAGTGCTTTTA CTATCTTATATCCCC TERM 1340 1211948 - 1211909 - T 100 -11.1 -5.47964 | gap 2, opp_overlap 1211904 1211909 AGAAAATAACAAAAA GCACTGTTTTAAGCAGAAA AGTT TTTCTGCTT-AA-CAGTGC TTTTACTATCTTATA TERM 1341 1211909 - 1211948 + T 100 -11.1 -4.44819 | gap 2, opp_overlap 1211909, overlap 1211904 AGAAAATAACAAAAA GCACTGTTTTAAGCAGAAA AGTT TTTCTGCTT-AA-CAGTGC TTTTACTATCTTATA SMU.1284c 1212772 - 1212113 - | hypothetical protein SMU.1286c 1213952 - 1212774 - | putative permease; multidrug efflux protein TERM 1342 1213803 - 1213789 - G 79 -5 -5.28942 | overlap 1213790 TAGGCGAAAGAAAAA CTGGTT CCC AACCAA GCTGTCTGTTCTGCA TERM 1343 1214129 - 1214117 - g 71 -3.4 -5.0666 | TATGGAAAAAAGAAA CGAA GATTA TTCG GCATTATTAGATGTC SMU.1287 1214103 - 1214453 + | putative transcriptional regulator TERM 1344 1214481 - 1214458 - T 81 -3.1 -5.7827 | overlap 1214461 1214462 AAGACAAATAAAAAA GAGTGGAAC ACTTTG GTCCCAGTC TTTCAAAATATAGAA TERM 1345 1214609 - 1214585 - T 100 -13.1 -5.4505 | opp_overlap 1214592 TTTGTCAATAAAAAA GATTGAAGAAA CCA TTTCTTCAATC TAGACAATCTAATAG rplS 1214979 - 1214632 - | 50S ribosomal protein L19 SMU.1289c 1216388 - 1215168 - | putative permease, chloride channel TERM 1346 1215682 - 1215670 - G 78 -3.4 -5.5074 | CAAGCTAATAAAAAA GCAA ATAAA TTGC CTGCTAAACCAAAGA SMU.1290c 1217694 - 1216474 - | putative permease, chloride channel TERM 1347 1217557 - 1217540 - G 80 -2.7 -5.5762 | ATCAAATATAAAAAA TGCGTTT CTCG AAAAGCA GTCAGAGTATTTAAG SMU.1291c 1217956 - 1217684 - | hypothetical protein SMU.1292c 1218679 - 1218002 - | hypothetical protein SMU.1293c 1220483 - 1219101 - | hypothetical protein flaW 1221086 - 1220643 - | flavodoxin add 1222194 - 1221145 - | adenosine deaminase TERM 1348 1222715 - 1222727 + G 73 -6.9 -4.15222 | opp_overlap 1222715 GCTCTTCTGGCAAAT GGGGG CTG CTCCC TTTGTTGGCGGCGGT SMU.1296 1222269 - 1223060 + | putative glutathione S-transferase YghU SMU.1297 1223132 - 1224064 + | hypothetical protein TERM 1349 1224188 - 1224170 - g 83 -3.9 -5.54079 | TTAAAAATGAAAAAA GATATTC ATCCA GAATACC GTCCAGTTGTCTTTA rpmE2 1224161 - 1224403 + | 50S ribosomal protein L31 type B TERM 1350 1224436 - 1224411 - T 100 -14.9 -4.62803 | opp_overlap 1224411 1224416, overlap 1224416 TCAAATAATAAGAAA GAAAACCTTGC TTTG GCAAGGTTTTC TTTTTCTTATATAAG TERM 1351 1224411 - 1224436 + T 100 -14.9 -5.24796 | opp_overlap 1224411 1224416, overlap 1224416 TCAAATAATAAGAAA GAAAACCTTGC TTTG GCAAGGTTTTC TTTTTCTTATATAAG TERM 1352 1224431 - 1224416 - T 95 -9 -5.18297 | opp_overlap 1224411 1224416, overlap 1224411 TAATAAGAAAGAAAA CCTTGC TTTG GCAAGG TTTTCTTTTTCTTAT TERM 1353 1224416 - 1224431 + T 100 -9 -5.44638 | opp_overlap 1224416 1224411, overlap 1224411 TAATAAGAAAGAAAA CCTTGC TTTG GCAAGG TTTTCTTTTTCTTAT SMU.1299c 1224766 - 1224443 - | putative acetate kinase SMU.1300c 1225106 - 1224759 - | hypothetical protein SMU.1301c 1225915 - 1225160 - | putative methyltransferase adcA 1227596 - 1226076 - | putative surface adhesin; AdcA protein homolog; putative Zn-binding lipoprotein TERM 1354 1226654 - 1226668 + g 81 -4.2 -5.41746 | GTTTGATTTCTTTAC CGGCAG AAT CTGTTG TTTTTTTCAAAGCTT SMU.1303c 1229223 - 1227823 - | putative dipeptidase TERM 1355 1228321 - 1228342 + g 70 -5.9 -4.22927 | opp_overlap 1228337 ACTAAGGCGGTCTCC TTCTGATCC ATAA GGATCAAAA TTTGTATCTTGATAG SMU.1304c 1230497 - 1229586 - | hypothetical protein SMU.1305c 1231471 - 1230494 - | hypothetical protein SMU.1306c 1232358 - 1231468 - | hypothetical protein SMU.1307c 1233109 - 1232351 - | hypothetical protein aldR 1233617 - 1233240 - | putative translation initiation inhibitor; aldR regulator-like protein TERM 1356 1233602 - 1233618 + g 79 -3.8 -5.4148 | CGGGTGCTTTATCAG TATGAA TTTTT TTCATA TTTTTTCCTTCTTTC SMU.1309c 1234738 - 1233647 - | putative glycerol dehydrogenase TERM 1357 1234803 - 1234855 + H 71 -7.9 -3.4409 | opp_overlap 1234804, overlap 1234804 1234806 1234848 CAATTTATTAACGAA ACAGAGACAAAAGATGATTTTCAAG CTA TTTGAAGAGCACCTTTTGTATCTGC TTGATGCTTTTTATT TERM 1358 1234854 - 1234804 - H 91 -10.7 -3.967 | opp_overlap 1234803 1234804 1234806 1234848 AATTTATTAACGAAA CAGAGACAAAAGATGATTTTCAA GCTAT TTGAAGAGCACCTTTTGTATCTG CTTGATGCTTTTTAT TERM 1359 1234804 - 1234854 + H 86 -11.4 -2.64827 | opp_overlap 1234804, overlap 1234803 1234806 1234848 AATTTATTAACGAAA CAGAGACAAAAGATGATTTTCAAG CTA TTTGAAGAGCACCTTTTGTATCTG CTTGATGCTTTTTAT TERM 1360 1234848 - 1234862 + G 72 -2.1 -5.18726 | opp_overlap 1234804, overlap 1234806 1234804 1234803 TGAAGAGCACCTTTT GTATC TGCTT GATGC TTTTTATTATAGCAA SMU.1310 1234816 - 1234953 + | hypothetical protein asnC 1236596 - 1235250 - | asparaginyl-tRNA synthetase TERM 1361 1236622 - 1236637 + r 72 -2.6 -5.36364 | TTTCTAATTTTTATT TAAGTT GGAT AACTTG TTTTTCTATTTTTCC aspB 1237824 - 1236643 - | aspartate aminotransferase SMU.1313c 1240352 - 1237890 - | bifunctional ATP-dependent DNA helicase/DNA polymerase III subunit epsilon SMU.1314 1240761 - 1241444 + | hypothetical protein TERM 1362 1241561 - 1241585 + T 100 -10.2 -5.19212 | opp_overlap 1241561 TAAGCCTATTAAAAA TACGGTTAAA CGACA TTTAACCGTA TTTTTTGATAATACT TERM 1363 1241585 - 1241561 - T 100 -10.9 -4.74801 | opp_overlap 1241561 TAAGCCTATTAAAAA TACGGTTAAAC GAC ATTTAACCGTA TTTTTTGATAATACT SMU.1315c 1242309 - 1241656 - | putative ATP-binding protein SMU.1316c 1243042 - 1242311 - | hypothetical protein SMU.1317c 1243307 - 1243080 - | hypothetical protein TERM 1364 1243897 - 1243924 + r 74 -9.2 -3.15999 | opp_overlap 1243898, overlap 1243900 CTCGGAATATCAAAA AGAGTTTGGGAC AAAA GTCTCAAACTCC TTCAATCTGTGCAAC TERM 1365 1243923 - 1243898 - R 100 -10.5 -4.87626 | opp_overlap 1243897 1243900 TCGGAATATCAAAAA GAGTTTGGGAC AAAA GTCTCAAACTC CTTCAATCTGTGCAA TERM 1366 1243900 - 1243921 + r 74 -9.5 -2.78154 | opp_overlap 1243898, overlap 1243897 GGAATATCAAAAAGA GTTTGGGAC AAAA GTCTCAAAC TCCTTCAATCTGTGC SMU.1319c 1244842 - 1244138 - | hypothetical protein SMU.1321c 1246210 - 1245032 - | hypothetical protein TERM 1367 1246341 - 1246330 - R 91 -3.6 -6.11229 | opp_overlap 1246324, overlap 1246322 ACTAAAACAAAAAAA GACC CTAA GGCC TTTTTCTCTATTTTA budC 1247118 - 1246354 - | acetoin reductase TERM 1368 1247194 - 1247223 + H 100 -9.5 -5.08601 | overlap 1247196 AAAAAATGACGGCTT TCCTTTCTTTTTG ATTT CAAAAAGAAAGCA TTTTTGTTAAACTAA TERM 1369 1247196 - 1247221 + H 87 -12.1 -2.7794 | overlap 1247194 AAAATGACGGCTTTC CTTTCTTTTTG ATTT CAAAAAGAAAG CATTTTTGTTAAACT TERM 1370 1247651 - 1247662 + G 73 -4.4 -4.97405 | CCCGGACATTCTTGG GGAA GTGT TTCC TTTATTTTTATAGAT SMU.1323 1247243 - 1247881 + | hydrolase TERM 1371 1247901 - 1247913 + T 70 -6.3 -4.28115 | ATGAGAAATCTTCAA TCAAG CTA CTTGA TTTGCTTTATTTAGT TERM 1372 1247985 - 1247998 + T 91 -5.2 -5.80248 | opp_overlap 1247978 1247985 CCGATAAGCAAAAAA GCCC AATCAA GGGC TTTTTTTATATCTTC TERM 1373 1247998 - 1247985 - T 84 -5.2 -5.32944 | opp_overlap 1247985, overlap 1247978 CCGATAAGCAAAAAA GCCC AATCAA GGGC TTTTTTTATATCTTC ftsX 1248939 - 1248004 - | putative cell-division protein FtsX TERM 1374 1248492 - 1248506 + g 74 -8.6 -3.49102 | TAGCTACTGTTTTGA CTTCAC TAG GTGAAG TTGTCTGCACAATGT ftsE 1249624 - 1248932 - | putative ABC transporter, ATP-binding component rf2 1250623 - 1249646 - | peptide chain release factor 2 SMU.1327c 1251912 - 1250791 - | 4Fe-4S ferredoxin TERM 1375 1252137 - 1252169 + r 79 -10.7 -2.53876 | opp_overlap 1252139 TTCATGAACTTAGAT AAGCTCCAACTGTTT CCC AAACAATTGGAGCTG TCACTTGCAGTGCAA TERM 1376 1252167 - 1252139 - R 100 -15.5 -3.55814 | opp_overlap 1252137 CATGAACTTAGATAA GCTCCAACTGTTT CCC AAACAATTGGAGC TGTCACTTGCAGTGC TERM 1377 1252316 - 1252293 - R 88 -6.6 -5.18726 | opp_overlap 1252293 CCTGTACAATAAAAA GGCTGGGGCA CTTT TGTTCCAGCC TTAATTAAAAAAACA TERM 1378 1252293 - 1252316 + r 85 -11 -3.33696 | opp_overlap 1252293 CCTGTACAATAAAAA GGCTGGGGCA CTTT TGTTCCAGCC TTAATTAAAAAAACA SMU.1329c 1253145 - 1252672 - | putative transposase TERM 1379 1253201 - 1253223 + r 100 -11.4 -4.55023 | opp_overlap 1253196 1253195 1253203 1253205 TATAACTAAGCACGA GAGAGAATCA GAT TGGTTCTCTC TTTTGTGATGTTCAA SMU.1330c 1253331 - 1253191 - | putative transposase SMU.1331c 1253951 - 1253406 - | putative transposase SMU.1332c 1254302 - 1254039 - | putative transposase TERM 1380 1254557 - 1254510 - R 77 -4.3 -5.24989 | gap 1, opp_overlap 1254486, overlap 1254484 1254482 1254511 TCATACACTAAAAAA GCCCTATAATATCCG-AAAGGG ATTTA CCCACTACAGATATTATAGAGT CCAAATTAATTGTCT TERM 1381 1254556 - 1254511 - R 73 -7.8 -3.73909 | gap 1, opp_overlap 1254486, overlap 1254484 1254482 1254510 CATACACTAAAAAAG CCCTATAATATCCG-AAAGGG ATTTA CCCACTACAGATATTATAGAG TCCAAATTAATTGTC sfp 1255776 - 1255084 - | putative phosphopantetheinyl transferase TERM 1382 1255196 - 1255212 + g 75 -2.3 -5.4505 | opp_overlap 1255198, overlap 1255198 1255200 1255201 1255201 CCTTTCTCTATACTA TACTTTT TGA AAAAGAA TTTTTTATTCAAAGG TERM 1383 1255818 - 1255844 + r 72 -7.4 -3.87627 | overlap 1255816 TTTAAGTATTGCCAA CCTGTGGTAAAT CAT ATTTACTGTAGG TCTTTTCTGTACAGC SMU.1335c 1256787 - 1255804 - | putative enoyl-(acyl-carrier-protein) reductase pksD 1257738 - 1256800 - | hypothetical protein SMU.1337c 1258516 - 1257767 - | alpha/beta superfamily hydrolase SMU.1338c 1259699 - 1258545 - | multidrug ABC transporter permease TERM 1384 1259093 - 1259083 - G 70 -2.6 -5.04249 | CCGTTAAAAAAGAAA TTTT GAA AAAA TATAGATACAACAAT bacD 1264157 - 1259790 - | putative bacitracin synthetase TERM 1385 1262169 - 1262153 - G 77 -8.1 -3.87869 | opp_overlap 1262143 TGAATCTGTTAGAAA TAGCTTT TAA AAAGCTA TAAAGATTACTTTGC TERM 1386 1262350 - 1262366 + g 76 -7.3 -4.26188 | TTCAGTATAAATTTT TTCCTTG ACT CAGGGAA TTTTGAATCTATAGG bacA2 1269141 - 1264255 - | putative surfactin synthetase TERM 1387 1267799 - 1267785 - G 72 -5.8 -4.4831 | opp_overlap 1267785 1267784 ACTCAGCAAAAAGAA CTAATT TAG AATTAG ATTTTTCACCAATTA TERM 1388 1267939 - 1267929 - G 71 -3.2 -5.06414 | TGCGGCCAATAAAAA TGAG ATC CCCA TCATTATTTTCTCTA TERM 1389 1269101 - 1269115 + g 79 -5.8 -4.88295 | GTGAGATAATTATCA TAATCA AAT TGATTA TTTTTAAATTTCTTT SMU.1341c 1272830 - 1269141 - | putative gramicidin S synthetase bacA1 1281023 - 1272849 - | putative bacitracin synthetase 1; BacA TERM 1390 1274193 - 1274203 + g 73 -4 -5.10601 | CAAAATATTACTTTG CATT GGT AATG TTTTTCTAATTTTAT TERM 1391 1274454 - 1274439 - G 70 -2.6 -5.06414 | TCCCTTTAAGAAAAA TACTGA AAAT TCAATA AGATATGGATTACTA TERM 1392 1278611 - 1278593 - G 85 -10.4 -3.9243 | TAATTTTGTAAACAA TTGGCATA TTA TATGCCAA AGACTTCTCATCAAT TERM 1393 1280327 - 1280315 - G 72 -6.3 -4.46112 | opp_overlap 1280315 GTTTACTTAAATAAA GAGAA AGT TTCTC TGATTCCTGATTAAG SMU.1343c 1284383 - 1281069 - | putative polyketide synthase TERM 1394 1282137 - 1282147 + g 73 -2.6 -5.33921 | AAAATTTACTGATTC TTTT GGT AAAA TTTTTTGCTTAATTT TERM 1395 1282313 - 1282324 + g 76 -3 -5.4505 | GATATCTTATTTGGT GAAT GTAC ATTC TTTTTTGTTGAGGGG TERM 1396 1282822 - 1282844 + g 86 -10.8 -4.09243 | TTATTTCCAACTTCT GATGAAAAAA ATA TTTTTTCATC TTTTACAAAAGTATC SMU.1344c 1285645 - 1284428 - | putative malonyl-CoA acyl-carrier-protein transacylase SMU.1345c 1287561 - 1285660 - | putative peptide synthetase MycA TERM 1397 1286193 - 1286210 + g 73 -4.1 -5.02074 | CAATAATTACAACTC TTCCTGA TAAC TCTGGAA TTTTTTGAACAATAG bacT 1288292 - 1287573 - | putative thioesterase BacT SMU.1347c 1290627 - 1288285 - | permease TERM 1398 1289427 - 1289413 - G 72 -8.6 -3.34029 | TAAATACCGCCATAA GAAAGG AAT CCTTTC TAATAAAATACCTTT TERM 1399 1290566 - 1290552 - G 70 -5.8 -4.28323 | opp_overlap 1290552 AGGAACCAATAGAAA CAATTA AAA TAATTG TTATAAATTGTGCTA SMU.1348c 1291333 - 1290632 - | putative ABC transporter, ATP-binding protein TERM 1400 1291661 - 1291650 - H 71 -3 -5.24129 | TTTTTTGATAAAAAA TAGT TTAT ACTA CTAAGTAAGGAGAGG TERM 1401 1292106 - 1292094 - g 74 -6.3 -4.68724 | TTATTTAATATAAAA TTTCC TAA GGAAA TGCTAACTGATATAT SMU.1349 1291686 - 1292261 + | hypothetical protein TERM 1402 1292393 - 1292383 - f 76 -5.4 -4.96762 | GAGACAGTAGAAAAA CACT ATT AGTG GACTTGGTATAATAA SMU.1351 1292444 - 1292812 + | putative putative transposase SMU.1352 1292790 - 1293113 + | putative transposase SMU.1353 1293138 - 1293293 + | putative transposase TERM 1403 1293421 - 1293455 + T 70 -6.4 -4.21322 | overlap 1293416 TGACAAGTCCATAGG CGGCCGACCTTCTGTA CTC TATGGGAGATTGGTCG TTTAATTTATGTTGA SMU.1354c 1293939 - 1293679 - | putative putative transposase SMU.1355c 1294247 - 1293954 - | putative transposase fregment SMU.1356c 1294552 - 1294262 - | putative putative transposase SMU.1357 1294643 - 1294879 + | putative putative transposase SMU.1358 1294890 - 1294991 + | putative putative transposase SMU.1359 1295127 - 1295237 + | hypothetical protein SMU.1360c 1295400 - 1295272 - | hypothetical protein SMU.1361c 1295959 - 1295378 - | TetR family transcriptional regulator TERM 1404 1296465 - 1296483 + r 100 -14.6 -3.53224 | opp_overlap 1296465 CCCTTCAAATCATAA CCACCCGT CTA ACGGGTGG TTTGGACGAGGGCTA TERM 1405 1296483 - 1296465 - R 100 -14.6 -3.60151 | opp_overlap 1296465 CCCTTCAAATCATAA CCACCCGT CTA ACGGGTGG TTTGGACGAGGGCTA TERM 1406 1296515 - 1296536 + r 95 -11.5 -3.93262 | opp_overlap 1296512 AAGCCCACATCACCA GCCAGCGCC TAAA GACGCTGGC TTTCACTTTGTTCAA SMU.1363c 1296881 - 1296600 - | putative transposase TERM 1407 1297146 - 1297164 + r 93 -10.2 -4.62441 | opp_overlap 1297143, overlap 1297147 TATAACATTCAATGC GCACCCGC ATA GCGGGTGG TTTATTTGTCTCGCA TERM 1408 1297147 - 1297163 + r 100 -13.7 -3.36742 | opp_overlap 1297143, overlap 1297146 ATAACATTCAATGCG CACCCGC ATA GCGGGTG GTTTATTTGTCTCGC TERM 1409 1297216 - 1297245 + r 74 -5.8 -4.72272 | opp_overlap 1297211 1297216 AAGTCACTAATCAAA GAGTTTGAGAAA TCTTTT TGTCTCAGACTC TTTTTGGTGAGAGCC SMU.1365c 1299660 - 1297315 - | permease TERM 1410 1298457 - 1298443 - G 72 -8.6 -3.34029 | TAAATACCGCCATAA GAAAGG AAT CCTTTC TAATAAAATACCTTT TERM 1411 1299596 - 1299582 - G 70 -5.8 -4.28323 | opp_overlap 1299582 AGGAACCAATAGAAA CAATTA AAA TAATTG TTATAAATTGTGCTA SMU.1366c 1300363 - 1299662 - | putative ABC transporter; ATP-binding protein SMU.1367c 1300975 - 1300376 - | hypothetical protein TERM 1412 1301006 - 1301035 + H 78 -6.7 -4.38927 | opp_overlap 1301006 TCTCCTTTTACATAA GTTTGAAATAT TTATATTT ATATTTCAAAC TTTATTGTATAAAAA SMU.1368 1301468 - 1301587 + | hypothetical protein SMU.1369 1301828 - 1301950 + | hypothetical protein TERM 1413 1302225 - 1302192 - T 71 -8.3 -3.19463 | gap 1, opp_overlap 1302192 1302194 CGTATTATTTAGTAA GATATGACTCCC-TGA ATT CCATAGGAGTCATACC TTTTAATTTCTCTTG SMU.1370c 1302798 - 1302181 - | putative transposase, IS150-like TERM 1414 1302691 - 1302721 + g 82 -8.4 -4.3487 | gap 1 TGCTTTAAAGTTTCG GGCAAG-CACGTT GTAGTG GACGTGTCTTGCC TTTTCAGTTATCTCT TERM 1415 1303067 - 1303033 - R 100 -11.5 -4.23045 | opp_overlap 1303033 1303031 1303030, overlap 1303036 CAACGACTTAATAAA GAAGGCCTCTTCTCA CTTTC TGAGGAGAGGCCTTA AGATCTTTAAAATGG TERM 1416 1303064 - 1303036 - R 100 -13.2 -4.22554 | opp_overlap 1303033 1303031 1303030, overlap 1303033 CGACTTAATAAAGAA GGCCTCTTCTCA CTTTC TGAGGAGAGGCC TTAAGATCTTTAAAA TERM 1417 1303429 - 1303373 - R 88 -9.2 -4.34402 | opp_overlap 1303373 1303377 1303380 TTCGCCATATGAAAA GAACCTCCTTATAA-GAACAGTATATAA CTT TTTTATACTGTCCATTATAAGT-GGTTC TTTTCAACGGCCTTG TERM 1418 1303373 - 1303429 + r 71 -7 -4.08692 | opp_overlap 1303373, overlap 1303377 1303380 TTCGCCATATGAAAA GAACCTCCTTATAA-GAACAGTATATAA CTT TTTTATACTGTCCATTATAAGT-GGTTC TTTTCAACGGCCTTG TERM 1419 1303437 - 1303471 + r 90 -12.2 -3.01924 | AGTGGTTCTTTTCAA CGGCCTTGTCTCTCTT TTC AAGAGGGGCAAGATCG TATTGCAAGAAGGTA SMU.1372c 1303802 - 1303560 - | hypothetical protein SMU.1373c 1304160 - 1303978 - | hypothetical protein SMU.1374 1304544 - 1304747 + | hypothetical protein SMU.1375c 1305683 - 1305078 - | hypothetical protein TERM 1420 1305341 - 1305351 + g 77 -8.2 -3.88029 | GGTGAAATACTTTCT CGGC AAA GCCG TCTTTTGTATAACCT TERM 1421 1305779 - 1305793 + r 77 -10 -2.57003 | opp_overlap 1305779, overlap 1305778 1305776 TTTAATATTGAAAAA CAGTCC TAA GGACTG CTGCTTTTTAATAAT TERM 1422 1305793 - 1305779 - R 100 -10 -4.74706 | opp_overlap 1305779 1305778 1305776 TTTAATATTGAAAAA CAGTCC TAA GGACTG CTGCTTTTTAATAAT SMU.1377c 1306586 - 1305801 - | hypothetical protein SMU.1378 1306651 - 1307187 + | hypothetical protein TERM 1423 1307294 - 1307334 + F 100 -17.2 -5.19328 | opp_overlap 1307291 GATTGCTATGAACTG CACCCCAAAAGTTAGA CAGAAAAAA TCTAACTTTTGGGGTG TTTTTATTATGAAAT SMU.1379 1307343 - 1307861 + | hypothetical protein TERM 1424 1307850 - 1307838 - T 79 -4.8 -5.31855 | GAGCAAGAAGAAAAA CGGA AATTG TCCG AGGATTGGTAACGGA TERM 1425 1308682 - 1308650 - T 95 -10.7 -4.69549 | opp_overlap 1308650 AAGGTAAAACTAAAA GGACTTAGTCCTGTA CAG TACAGAACGAAATCC TTTACTTAAATTTTT leuD 1309390 - 1308800 - | isopropylmalate isomerase small subunit TERM 1426 1308943 - 1308930 - G 83 -6.7 -5.02715 | opp_overlap 1308929, overlap 1308923 ATATCAAAGGAAAAA TCTCC TACG GGAGA ATAGATTTTTTGTTC leuC 1310777 - 1309392 - | isopropylmalate isomerase large subunit leuB 1311937 - 1310903 - | 3-isopropylmalate dehydrogenase leuA 1313512 - 1311947 - | 2-isopropylmalate synthase TERM 1427 1312462 - 1312450 - G 83 -7.7 -4.60924 | opp_overlap 1312450 TAAATTTTGCAAAAA GAGGT GCA ACCTC TCCTTCTTCAAAATC TERM 1428 1313580 - 1313553 - R 100 -9.2 -5.77856 | opp_overlap 1313553, overlap 1313568 1313569 AATAAAGTAAAAAAA CATCTCACTCAG AAAC CCAAGCGAGATG TTTTTTCTTCCCGCT TERM 1429 1313553 - 1313580 + r 72 -2.6 -5.45652 | opp_overlap 1313553 1313568 1313569 AATAAAGTAAAAAAA CATCTCACTCAG AAAC CCAAGCGAGATG TTTTTTCTTCCCGCT TERM 1430 1313598 - 1313569 - R 79 -10 -2.95102 | opp_overlap 1313553, overlap 1313553 1313568 ATCTCACTCAGAAAC CCAAGCGAGATG TTTTTT CTTCCCGCTTGG TAAGCCAAACAGGAC TERM 1431 1313635 - 1313608 - R 80 -9.2 -3.75153 | overlap 1313610 GCTTGGTAAGCCAAA CAGGACTAATGC TTTT GCATTAGCCCTC ACACCTCAACAACAA TERM 1432 1313633 - 1313610 - R 91 -11.8 -3.46068 | overlap 1313608 TTGGTAAGCCAAACA GGACTAATGC TTTT GCATTAGCCC TCACACCTCAACAAC urk 1314467 - 1313838 - | uridine kinase TERM 1433 1314398 - 1314412 + g 72 -5.6 -4.62069 | opp_overlap 1314398 1314397 AGTTGGCCAAAATAG CCCGTG AGA CACTGG TTTTTCCACTACCAG SMU.1387 1314686 - 1315666 + | putative oxidoreductase TERM 1434 1315680 - 1315664 - g 75 -2.3 -5.38047 | overlap 1315675 GAGGCAGACAAAAAA TGAAAAC ACA ATTTCCA AGCGTTTGGCAAGAT TERM 1435 1316100 - 1316135 + G 70 -8.6 -3.10052 | gap 1, opp_overlap 1316104, overlap 1316099 TACAATTGTTCTAGA TGAATTTGATGACTTAC TTG GTAAATC-TCAAATTCA CTTTGTTAAAAATAT SMU.1388 1315663 - 1316745 + | putative RNA helicase TERM 1436 1316774 - 1316743 - T 100 -7.5 -5.37043 | opp_overlap 1316743 ATTTTACATAAAAAA TGAAAACAGAG TTGGTGATTG CTCTGTTTTCA TTTTTTTGATAGATT TERM 1437 1316743 - 1316774 + T 100 -8.2 -5.54894 | opp_overlap 1316743 ATTTTACATAAAAAA TGAAAACAGAGT TGGTGATT GCTCTGTTTTCA TTTTTTTGATAGATT pckA 1318578 - 1316938 - | hypothetical protein SMU.1390 1318897 - 1319553 + | hypothetical protein TERM 1438 1319613 - 1319576 - T 72 -5.1 -4.83759 | opp_overlap 1319578, overlap 1319578 AATTAAACCTAAAAA CACAAAAAAGTGAGA TTTCATTT CCTCACTTTTTTATA TTGCTTAATTTTCAG SMU.1391c 1320226 - 1319618 - | hypothetical protein TERM 1439 1320009 - 1320025 + g 72 -8.7 -3.28542 | overlap 1319997 1320008 TTAGATGTTGCTTTT GAAGCGG AAT CTGCTTC CTTCTTTTCTTCTGG SMU.1392c 1320782 - 1320306 - | putative acetyltransferase SMU.1393c 1321688 - 1320861 - | hypothetical protein lepA 1323552 - 1321717 - | GTP-binding protein LepA TERM 1440 1323251 - 1323231 - G 70 -6.2 -4.3129 | gap 1 CATCTACCACCAAAA TGGCA-CCT TCAC AGGCTGCCA AAGAACGTGACACTT SMU.1395c 1323929 - 1323801 - | hypothetical protein TERM 1441 1324204 - 1324244 + r 100 -16.4 -2.87468 | opp_overlap 1324195 1324199, overlap 1324209 TAACAAGAACTGCTG CTCAAGCCTTCAACAGTT CAGTA GACTGTTAAAGGCTTGAG TCTAATCTAATCAAC TERM 1442 1324209 - 1324239 + r 74 -9.1 -3.1544 | opp_overlap 1324195 1324199, overlap 1324204 AGAACTGCTGCTCAA GCCTTCAACAGTT CAGTA GACTGTTAAAGGC TTGAGTCTAATCTAA TERM 1443 1324301 - 1324276 - R 71 -3.2 -5.25699 | ACTATACAATAAAAA GGGCGGAACA CTTTTT TGTCCCAACC TCTTTTTATAGAAAT gbpC 1326075 - 1324324 - | glucan-binding protein C, GbpC TERM 1444 1324581 - 1324598 + g 70 -4.9 -4.54727 | gap 1, overlap 1324584 TTGTTGGTGGTGTCA CTGGAGGA ACT TCCTC-AG TTTTAGTTTCAACAA TERM 1445 1325413 - 1325429 + g 75 -9.5 -3.32832 | ATCAGTATTATATTG CTGAAGA ATA TCTTCAG TTGCATGTTTTTGAC SMU.1397c 1326523 - 1326284 - | hypothetical protein TERM 1446 1326324 - 1326343 + g 70 -8.6 -3.07307 | opp_overlap 1326324 1326325 CTGATATCATAGTAA TTGGCCAA ATCA TTGGCCAG TTGAATGGGAATTTC TERM 1447 1326342 - 1326325 - G 74 -9.9 -2.5844 | opp_overlap 1326324, overlap 1326324 TGATATCATAGTAAT TGGCCAA ATCA TTGGCCA GTTGAATGGGAATTT SMU.1398 1326877 - 1327731 + | putative transcriptional regulator TERM 1448 1327750 - 1327786 + F 88 -11.9 -2.95472 | opp_overlap 1327755, overlap 1327755 TTAAAGAAAGTCCCA TAAAAGACACTTGAA TTATTGC TTCAAGTGTCTTTTG CTTATTTAAAAATCT TERM 1449 1327755 - 1327781 + F 93 -9.6 -4.62203 | opp_overlap 1327755, overlap 1327750 GAAAGTCCCATAAAA GACACTTGAA TTATTGC TTCAAGTGTC TTTTGCTTATTTAAA TERM 1450 1327781 - 1327755 - f 91 -9.6 -4.41241 | opp_overlap 1327755 1327750 GAAAGTCCCATAAAA GACACTTGAA TTATTGC TTCAAGTGTC TTTTGCTTATTTAAA SMU.1399 1327999 - 1328319 + | hypothetical protein TERM 1451 1328359 - 1328394 + T 95 -10.7 -4.39226 | opp_overlap 1328364, overlap 1328364 CTTATATTATACCTA AAAAATCGCTAGAAA TCAATC TTTCTAGCGATTTTA TTGTTTTATAATTGT TERM 1452 1328389 - 1328364 - T 100 -10.6 -5.13473 | opp_overlap 1328364 1328359 ATTATACCTAAAAAA TCGCTAGAAA TCAATC TTTCTAGCGA TTTTATTGTTTTATA TERM 1453 1328364 - 1328389 + T 100 -10.6 -5.12916 | opp_overlap 1328364, overlap 1328359 ATTATACCTAAAAAA TCGCTAGAAA TCAATC TTTCTAGCGA TTTTATTGTTTTATA SMU.1400c 1328777 - 1328400 - | hypothetical protein SMU.1402c 1329655 - 1329083 - | hypothetical protein TERM 1454 1329504 - 1329488 - G 75 -8.1 -3.72576 | TGGTTTTTCATTAAA CTGATTT TCT AAATCAG CGTGAACCAACTTCA SMU.1403c 1330064 - 1329735 - | hypothetical protein SMU.1404c 1330942 - 1330076 - | hypothetical protein SMU.1405c 1334979 - 1330942 - | hypothetical protein TERM 1455 1335122 - 1335136 + r 100 -11.4 -5.74086 | opp_overlap 1335120 AACTTGAAAAAGTGC GCACCG ATT CGGTGC TTTTTTATTTGCTTT TERM 1456 1335342 - 1335307 - R 100 -7.2 -5.40004 | gap 1, overlap 1335299 TATCAAATCAAAAAA TTGATGAAACCAGTCTA AAA TAAACTA-TTTCATCAA TCTGACAGTTACTGT SMU.1406c 1336226 - 1335360 - | hypothetical protein TERM 1457 1336315 - 1336298 - R 74 -2.1 -5.52384 | gap 1, overlap 1336300 TTGCGATTAAAAAAA GT-CATAT CTT ATATGTAC TGACCCCAAAAAGTT TERM 1458 1336351 - 1336383 + r 95 -10.7 -4.69549 | opp_overlap 1336351 AAAAATTTAAGTAAA GGATTTCGTTCTGTA CTG TACAGGACTAAGTCC TTTTAGTTTTACCTT SMU.1407c 1337178 - 1336342 - | putative transposase, ISSmu1 TERM 1459 1337183 - 1337195 + r 79 -4.8 -5.31855 | TCCGTTACCAATCCT CGGA CAATT TCCG TTTTTCTTCTTGCTC SMU.1408c 1337690 - 1337172 - | hypothetical protein TERM 1460 1337739 - 1337699 - R 100 -17.2 -5.19328 | opp_overlap 1337696 ATTTCATAATAAAAA CACCCCAAAAGTTAGA TTTTTTCTG TCTAACTTTTGGGGTG CAGTTCAATATAATG SMU.1409c 1338651 - 1337785 - | putative transcriptional regulator TERM 1461 1337992 - 1337979 - G 71 -3.8 -4.97461 | overlap 1337981 AAGAAATACCAAAAA GCTC GTGGCA GAGC CTTGAAAAATAATTG TERM 1462 1338249 - 1338261 + g 70 -4.9 -4.57073 | CATCATTATTGTCTC TTAGA TTT TCTAA TTTTTCAAGGGCATC TERM 1463 1339738 - 1339712 - g 70 -7.4 -3.76224 | opp_overlap 1339707 1339705, overlap 1339714 GGTGTAGGTAGTAAA TATTACTATGTC ATG GACACAGCAACA CTTGAAAGTTATACG SMU.1410 1338776 - 1340209 + | putative reductase SMU.1411 1340276 - 1341451 + | hypothetical protein TERM 1464 1341618 - 1341589 - T 72 -3.7 -5.24531 | opp_overlap 1341589 1341584 ATGGTGCATAAAAAA GCGAAACAA TTTATTATCTTT TTGTTTCGC TTTTGTCTTTATTCT SMU.1412c 1344155 - 1341627 - | putative ABC transporter, membrane protein subunit and ATP-binding protein TERM 1465 1341936 - 1341920 - G 73 -6.6 -4.22652 | opp_overlap 1341922 CCATAGCACGCAAAA CACCAA TTTCC TTGGTG CGTTCTAAAACAGAG TERM 1466 1342204 - 1342222 + g 75 -4.6 -5.06103 | ATGGTTTCTGGATTA TTGTTATC AAT GATACCAA TTTTTTCCAAGTTAT TERM 1467 1344263 - 1344239 - R 100 -9.4 -5.43553 | opp_overlap 1344237 1344239 1344243 ACGTAAAAAAGAAAA CAAACCAGTT ATCAG AACCGGTTTG TCTCTTCTGTACTGC SMU.1414c 1344909 - 1344250 - | hypothetical protein SMU.1415c 1345672 - 1344899 - | putative phosphatase involved in N-acetyl-glucosamine catabolism SMU.1416c 1346304 - 1345687 - | putative mutator protein MutT SMU.1417c 1347053 - 1346325 - | putative oleoyl-acyl carrier protein thioesterase hemN 1348198 - 1347056 - | coproporphyrinogen III oxidase TERM 1468 1348717 - 1348703 - H 72 -8.6 -3.0539 | opp_overlap 1348703, overlap 1348702 ATACTTATAAACAAG GTAGAC AAT GTCTAC TTTCGGAGGAAAACA TERM 1469 1348703 - 1348717 + H 76 -8.6 -3.53012 | opp_overlap 1348703 1348702 ATACTTATAAACAAG GTAGAC AAT GTCTAC TTTCGGAGGAAAACA TERM 1470 1349184 - 1349166 - g 82 -11.8 -2.97021 | opp_overlap 1349147 TCCGTAAAGAGGAGA GCTTCACT AAT AGTGAAGC TGAGACACTTTTTCA SMU.1419 1348733 - 1349329 + | putative transcriptional regulator SMU.1420 1349326 - 1349892 + | putative oxidoreductase TERM 1471 1349897 - 1349941 + T 100 -14.7 -2.76171 | opp_overlap 1349893 1349902, overlap 1349902 GTAATATTTAATCTC AAAAAGAGAAAGGGAAAAT CAATTAA ATTTTCCCTTTCTCTTTTA CTTCTGCTTATTAGA TERM 1472 1349936 - 1349902 - T 100 -15.3 -4.67234 | opp_overlap 1349897 1349902, overlap 1349893 ATTTAATCTCAAAAA GAGAAAGGGAAAATC AATTA AATTTTCCCTTTCTC TTTTACTTCTGCTTA TERM 1473 1349902 - 1349936 + T 100 -14.6 -4.52781 | opp_overlap 1349893 1349902, overlap 1349897 ATTTAATCTCAAAAA GAGAAAGGGAAAAT CAATTAA ATTTTCCCTTTCTC TTTTACTTCTGCTTA pdhC 1351205 - 1349952 - | branched-chain alpha-keto acid dehydrogenase subunit E2 pdhB 1352250 - 1351219 - | putative pyruvate dehydrogenase E1 component beta subunit) pdhA 1353336 - 1352263 - | putative pyruvate dehydrogenase, TPP-dependent E1 component alpha-subunit pdhD 1354699 - 1353362 - | putative dihydrolipoamide dehydrogenase TERM 1474 1353683 - 1353671 - G 70 -7.7 -3.61178 | TTCACTCAGTCCAAA GGAAG CCA CTTCC GGATTGGTGTAGAGC TERM 1475 1354885 - 1354846 - R 81 -4.5 -5.46698 | gap 1, opp_overlap 1354852 1354857, overlap 1354853 TCTAAAATTAAAAAA CCAACAG-TAAACGCTTG TATAT CAAGGGTTTAACTATTAG TCTTTTTCTTTAAAA clpB 1357510 - 1354928 - | putative Clp proteinase, ATP-binding subunit ClpB TERM 1476 1355975 - 1355992 + g 79 -8.5 -4.16371 | opp_overlap 1355974 TTCCTTTTCTAAAGC TGTCATC TTTT GATGACA TTTCCTTATTTCCTC TERM 1477 1356130 - 1356150 + g 81 -5.5 -5.20216 | GCTCTCTTTCCCTTT GCCAATT TGCTAAT AATTGGC TTTTTTGCTCCTCTA TERM 1478 1357088 - 1357099 + g 80 -3 -5.5454 | ACGAATCCTATGCAT CTTT TGAT AAAG TTTTTCTTTGTTTAG TERM 1479 1357688 - 1357630 - R 100 -27.3 -5.22137 | opp_overlap 1357633 1357641, overlap 1357671 AACTATAAAATAAAA GGACTGAGACAGCTTCTATGATTAC AAAGAGTAA ATAATCATAGAAGCTGTCTCAGTCC TATACACACTATTTT TERM 1480 1357633 - 1357685 + r 100 -21.1 -2.62735 | opp_overlap 1357630 1357671, overlap 1357641 TATAAAATAAAAGGA CTGAGACAGCTTCTATGATTA CAAAGAGTAAA TAATCATAGAAGCTGTCTCAG TCCTATACACACTAT SMU.1426c 1359052 - 1357703 - | putative phospho-sugar mutase TERM 1481 1358518 - 1358496 - G 87 -12.1 -3.14132 | TGGCGGGCTGAGTAA GATGCAGCA CCATT TGCTGCATC AATAGCAATTTTCAT SMU.1427c 1360059 - 1359103 - | hypothetical protein TERM 1482 1360076 - 1360094 + r 74 -3.2 -5.39681 | opp_overlap 1360076 ATGGCGTCCTCCAAA GAATTG CTTCATC CAATTC TTTTTCTTTGGTTCT SMU.1428c 1360906 - 1360052 - | hypothetical protein murC2 1361015 - 1362358 + | putative UDP-N-acetylmuramyl tripeptide synthetase MurC cobQ 1362358 - 1363146 + | putative cobyric acid synthase CobQ TERM 1483 1363181 - 1363159 - T 89 -8.5 -4.56629 | opp_overlap 1363159 TAGAAGATGATAAAA GCACAGATA AATAA CATCTGTGC TTTATATTATAATTT TERM 1484 1363159 - 1363181 + T 80 -7.8 -4.31815 | opp_overlap 1363159 TAGAAGATGATAAAA GCACAGAT AAATAAC ATCTGTGC TTTATATTATAATTT SMU.1431c 1365303 - 1363390 - | putative ABC transporter, ATP-binding protein TERM 1485 1365347 - 1365380 + r 74 -6.9 -4.24413 | opp_overlap 1365348 1365356, overlap 1365348 1365355 TAAGCTAGTTGAGAT AGTAAAAAAGATAAC CGCA GTTATCCTTTTTACA TTGTTTATTGATCCA TERM 1486 1365348 - 1365379 + r 83 -10.4 -3.13925 | opp_overlap 1365348 1365356, overlap 1365347 1365355 AAGCTAGTTGAGATA GTAAAAAAGATAAC CGCA GTTATCCTTTTTAC ATTGTTTATTGATCC TERM 1487 1365379 - 1365348 - R 90 -12.6 -2.9006 | opp_overlap 1365348 1365347 1365355, overlap 1365356 AAGCTAGTTGAGATA GTAAAAAAGATAAC CGCA GTTATCCTTTTTAC ATTGTTTATTGATCC TERM 1488 1365371 - 1365356 - R 84 -6.2 -5.24989 | opp_overlap 1365355 1365348 1365347, overlap 1365348 TGAGATAGTAAAAAA GATAAC CGCA GTTATC CTTTTTACATTGTTT SMU.1432c 1366272 - 1365385 - | putative endoglucanase precursor SMU.1434c 1367669 - 1366506 - | putative glycosyltransferase SMU.1435c 1367949 - 1367788 - | hypothetical protein SMU.1436c 1368751 - 1367963 - | hypothetical protein epsC 1369907 - 1368759 - | putative UDP-N-acetylglucosamine 2-epimerase TERM 1489 1370072 - 1370052 - R 72 -4.7 -4.84274 | TAATTATATTAAAAA CACTCTTTT TTC ACAAGAGCG TCCAAGGATAAAAAT SMU.1438c 1370932 - 1370234 - | putative Zn-dependent protease TERM 1490 1371313 - 1371333 + r 70 -6.2 -4.23213 | opp_overlap 1371317, overlap 1371317 CTTGCAGACTCAGAG CGAACTTC CTTTT GAAGTTTG TTTGTTGACTCTCAG TERM 1491 1371516 - 1371477 - R 100 -17.4 -3.19038 | opp_overlap 1371482, overlap 1371482 CTGAAAATCACGTAA TAAAACAGCAGGCAGAAT TAAG ACTCTGCCTGCTGTTTTT ATTTGTCAGCTAATA TERM 1492 1371482 - 1371511 + r 100 -15.1 -5.38054 | opp_overlap 1371477 1371482 AATCACGTAATAAAA CAGCAGGCAGAAT TAAG ACTCTGCCTGCTG TTTTTATTTGTCAGC TERM 1493 1371511 - 1371482 - R 100 -17.3 -4.69656 | opp_overlap 1371482, overlap 1371477 AATCACGTAATAAAA CAGCAGGCAGAAT TAAG ACTCTGCCTGCTG TTTTTATTTGTCAGC SMU.1442c 1372084 - 1371533 - | hypothetical protein TERM 1494 1372150 - 1372140 - R 70 -4 -5.10601 | opp_overlap 1372140 ATAAAACCAGAAAAA CTTA CCT TAAG ATTATTAGGACAACC SMU.1443c 1372946 - 1372155 - | putative tributyrin esterase TERM 1495 1372341 - 1372357 + g 83 -3.7 -5.61596 | ATCTTCATAACCGCA CCAAG CGTAGAA CTTGG TTTTTTTATCAGACT TERM 1496 1373411 - 1373398 - R 76 -5.3 -5.08824 | TCTCTATCCAAAAAA TCCAA CCAT TTGGA AACAGTATCAATCAA SMU.1444c 1375098 - 1373434 - | hypothetical protein TERM 1497 1373508 - 1373493 - G 70 -4.8 -4.57073 | TAGTTTGTTCAAAAA GAAATT TACC AATTTC ATCACGAACAATAGA TERM 1498 1373660 - 1373671 + g 80 -3 -5.55001 | overlap 1373660 TTGATTTTAGCTCTT GAAA TGAT TTTC TTTTCTTTTTTATTG TERM 1499 1373660 - 1373676 + g 79 -3.7 -5.45652 | overlap 1373660 TTGATTTTAGCTCTT GAAATGA TTT TCTTTTC TTTTTTATTGACAGT TERM 1500 1375199 - 1375176 - R 78 -9 -3.46824 | opp_overlap 1375176 TTATTAACGAATGAA TCTGATGAAA TATA TCTCATCAGA TTATCGTACCAACCA TERM 1501 1375323 - 1375301 - R 72 -2.8 -5.4505 | GCGGGCAATAAAAAA TTGCATAC ATTGTTA GTATACAA CTTTTCGCCAGTTTT SMU.1445c 1376103 - 1375345 - | putative ABC transporter, ATP-binding protein SMU.1446c 1376969 - 1376100 - | putative ABC transporter, permease protein SMU.1447c 1378081 - 1377080 - | hypothetical protein TERM 1502 1379956 - 1379943 - g 72 -2.4 -5.26918 | ATAGGGGACAAAAAA CGTT GCGCGT AACG CCTAATGAAGCTAAG SMU.1449 1378343 - 1379992 + | putative fibronectin/fibrinogen-binding protein TERM 1503 1380200 - 1380180 - f 83 -6.9 -4.78107 | CAGCACTATCAAAAA TGAGGAACA TTA TGTTCATCA TCCAATGATTGGAAT SMU.1450 1380297 - 1381694 + | putative amino acid permease TERM 1504 1381715 - 1381741 + T 100 -10.2 -5.11033 | opp_overlap 1381715 TAGTCAAGTCAAAAA GAGCTAAGGTTT ATA AGTCCTTAGCTC TTTTTTAAAGTTATA TERM 1505 1381741 - 1381715 - T 90 -8.1 -4.75174 | opp_overlap 1381715 TAGTCAAGTCAAAAA GAGCTAAGG TTTATAAGT CCTTAGCTC TTTTTTAAAGTTATA aldB 1382481 - 1381765 - | putative alpha-acetolactate decarboxylase alsS 1384174 - 1382495 - | acetolactate synthase TERM 1506 1382905 - 1382893 - G 70 -7.7 -3.55548 | CAAGAGCTGCCGAAA TTGCC CAA GGCAA AGCAACACCTAAGGT SMU.1453c 1385290 - 1384307 - | hypothetical protein SMU.1454c 1386698 - 1385529 - | putative membrane protein; permease TERM 1507 1386621 - 1386639 + g 70 -8.2 -3.28791 | opp_overlap 1386621 1386618 1386617 1386624 TAAAAGTAAAACCAA TAAGACCG TTA CGGTTTTA TTATCCAAGAACCAT mutX 1387246 - 1386767 - | mutator protein, pyrophosphohydrolase SMU.1456c 1387371 - 1387243 - | hypothetical protein TERM 1508 1387530 - 1387506 - R 88 -8.6 -4.49041 | gap 1, opp_overlap 1387503 1387506 AGAGAAAAAATCAAA GAGGC-AGGAC TTTT GTCCCAGCCTC TTATTTATCTTTAAT TERM 1509 1387506 - 1387530 + r 70 -6.4 -4.28747 | gap 1, opp_overlap 1387506, overlap 1387503 AGAGAAAAAATCAAA GAGGC-AGGAC TTTT GTCCCAGCCTC TTATTTATCTTTAAT rmlB 1388587 - 1387541 - | putative dTDP-glucose-4,6-dehydratase SMU.1459c 1389164 - 1388991 - | hypothetical protein rmlC 1389688 - 1389227 - | putative dTDP-4-keto-L-rhamnose reductase TERM 1510 1389737 - 1389720 - R 73 -8.4 -3.51232 | overlap 1389716 TTTTCTTTAAACCAA CCACGG TTATCG CCGTGG ACTGGAATATCAAAT rmlA 1390694 - 1389825 - | putative glucose-1-phosphate thymidyltransferase TERM 1511 1390442 - 1390428 - G 71 -6.4 -4.05446 | TTCTCCAATGATAAA GGCTTG TGC CAAACC ATCTGGACTCGGTTG SMU.1462c 1391862 - 1390759 - | putative oxidoreductase SMU.1463c 1392677 - 1391889 - | hypothetical protein SMU.1464c 1393365 - 1392667 - | hypothetical protein TERM 1512 1392960 - 1392941 - G 74 -5.8 -4.5442 | gap 1, overlap 1392944 GCCTTAATCATAAAA TCATTGGCT ACT AGCCAA-GA ACGTAAGTCATCTTC TERM 1513 1392958 - 1392944 - G 72 -8.6 -3.22215 | overlap 1392941 TTAATCATAAAATCA TTGGCT ACT AGCCAA GAACGTAAGTCATCT TERM 1514 1393310 - 1393287 - G 70 -7.4 -3.82084 | opp_overlap 1393297 TGCCAACATCAAGAA GCCTTGCACC TTTT GGCACAAAGC TTGCTACTTCCTGTA SMU.1465c 1394050 - 1393355 - | replication protein DnaD-like TERM 1515 1393723 - 1393704 - G 82 -10.8 -3.32343 | CTTATACCTTTAGAA GATGAGAC AGTT GTCTCATC AGCTGCAGTTAACAA TERM 1516 1394026 - 1393996 - G 76 -5.4 -4.8622 | opp_overlap 1393997 1394004, overlap 1393997 1394000 CTTTGTAATGAAAAA GCAAGGCACTTGGT AAG ACCAAATTCCCTGA TTTATAATGTTGCAA TERM 1517 1394025 - 1393997 - G 74 -8.9 -3.5125 | opp_overlap 1393997 1394004, overlap 1393996 1394000 TTTGTAATGAAAAAG CAAGGCACTTGGT AAG ACCAAATTCCCTG ATTTATAATGTTGCA TERM 1518 1394022 - 1394000 - G 72 -7 -3.88182 | opp_overlap 1393997 1394004, overlap 1393997 1393996 GTAATGAAAAAGCAA GGCACTTGGT AAG ACCAAATTCC CTGATTTATAATGTT metA 1395004 - 1394060 - | homoserine O-succinyltransferase TERM 1519 1394170 - 1394157 - G 75 -2.3 -5.43866 | overlap 1394158 CAATTGCTAAAAAAA GTCGC TGCT GCGAG ATTCCAACGCATAAT apt 1395626 - 1395108 - | adenine phosphoribosyltransferase TERM 1520 1395725 - 1395738 + r 73 -8.1 -3.54408 | opp_overlap 1395725, overlap 1395721 TTAAAAATACAAAAA GGGCT AAGC AGCCC TTCATTTAGGTAAAA TERM 1521 1395738 - 1395725 - R 100 -8.1 -5.36364 | opp_overlap 1395725 1395721 TTAAAAATACAAAAA GGGCT AAGC AGCCC TTCATTTAGGTAAAA SMU.1470c 1396931 - 1396299 - | hypothetical protein TERM 1522 1396964 - 1396987 + r 74 -3.2 -5.46129 | ATACCAAGAAAGTAT TAGACTTGTT TGGA AACGAATCTA TTTTTTACTTTGTTG SMU.1471c 1398083 - 1397184 - | hypothetical protein recJ 1400407 - 1398203 - | putative single-strand DNA-specific exonuclease RecJ TERM 1523 1399261 - 1399271 + g 73 -6.8 -4.28254 | overlap 1399250 TACGGGCACTTCCCT TGGC AAG GCCA TTTTCAATATTAAGA TERM 1524 1399571 - 1399585 + g 74 -8.6 -3.43071 | opp_overlap 1399576 CTGGGGTGCTAACTT GAAACC AAT GGTTTC TTCATTGATATCAGC TERM 1525 1399634 - 1399650 + g 79 -6.5 -4.69559 | opp_overlap 1399612 1399611 TGCTATTAATTCTTG CAGACCG ACG CGCTCTG TTTGTTTTAGGATTT TERM 1526 1400354 - 1400366 + g 93 -4.8 -5.77856 | opp_overlap 1400354 AGCCAGCTCAAAAAA GCCA TCATC TGGC TTTTTTTCATTTATT TERM 1527 1400366 - 1400354 - G 76 -4.8 -5.05782 | opp_overlap 1400354 AGCCAGCTCAAAAAA GCCA TCATC TGGC TTTTTTTCATTTATT SMU.1473c 1401168 - 1400404 - | putative oxidoreductase SMU.1474c 1402094 - 1401165 - | ribonuclease Z TERM 1528 1401902 - 1401890 - G 86 -7.7 -4.98531 | CCGGCAAACCAAAAA CATGG TCA CCATG CAGGTGGGTAATAAA SMU.1475c 1402757 - 1402122 - | hypothetical protein TERM 1529 1402300 - 1402317 + g 73 -7.1 -4.07651 | TTTTCCAATGTTTCA CTTTGAT ACTC ATCAAAG TTCATTTTTTTCATT TERM 1530 1402704 - 1402680 - G 74 -5 -4.85599 | opp_overlap 1402680 CTCATCTGACAAAAA GGCTAACTTG TTTTG CAAGTAAACC TTATCTAAGCTAGTA SMU.1476c 1403991 - 1402744 - | putative GTP-binding protein TERM 1531 1403772 - 1403755 - G 74 -9.9 -2.84961 | opp_overlap 1403757, overlap 1403754 1403757 ACGATTATTAACAAT GACGCTA TCAA TAGCGTC CGTTGCAATTATTTG TERM 1532 1403952 - 1403970 + g 79 -4.6 -5.23765 | overlap 1403944 GTAAAGCGACACCAA TAAGAATG ACC CGTTCTTG TTTTTGTCTTGTTTC TERM 1533 1404176 - 1404163 - R 77 -3.1 -5.5943 | opp_overlap 1404163 AAACTATGAAAAAAA TCACC TCAT AGTGA TTTCTAATTTCTTAA miaA 1405064 - 1404180 - | tRNA delta(2)-isopentenylpyrophosphate transferase TERM 1534 1404291 - 1404319 + g 79 -6.1 -5.00884 | overlap 1404289 1404287 1404295 CCAAGTCAACTGCCG TTTAGCAAAACGT CTT GTGTTTTGCTTAA TTTTTTCAACAGCCT TERM 1535 1404295 - 1404315 + g 72 -6.9 -3.93166 | overlap 1404289 1404287 1404291 GTCAACTGCCGTTTA GCAAAACGT CTT GTGTTTTGC TTAATTTTTTCAACA SMU.1479 1405139 - 1405315 + | hypothetical protein TERM 1536 1405380 - 1405330 - f 100 -12.2 -4.28548 | opp_overlap 1405332 1405336 1405341, overlap 1405332 1405341 ATTGATTTACTAAAA TACCAATAAAAGCTTTTCAAGTAA AAC TGACTTGAAAAGCTTTTATTTGCT CTTTCTTGAGAACTT TERM 1537 1405332 - 1405378 + F 100 -17 -2.80244 | opp_overlap 1405332 1405330 1405341, overlap 1405336 1405341 TGATTTACTAAAATA CCAATAAAAGCTTTTCAAGTAA AAC TGACTTGAAAAGCTTTTATTTG CTCTTTCTTGAGAAC TERM 1538 1405378 - 1405332 - f 100 -17 -3.745 | opp_overlap 1405332 1405336 1405341, overlap 1405330 1405341 TGATTTACTAAAATA CCAATAAAAGCTTTTCAAGTAA AAC TGACTTGAAAAGCTTTTATTTG CTCTTTCTTGAGAAC TERM 1539 1405336 - 1405374 + F 100 -16.4 -4.07859 | opp_overlap 1405332 1405330 1405341, overlap 1405332 1405341 TTACTAAAATACCAA TAAAAGCTTTTCAAGTAA AAC TGACTTGAAAAGCTTTTA TTTGCTCTTTCTTGA TERM 1540 1405369 - 1405341 - f 100 -11.9 -4.82518 | opp_overlap 1405336 1405332 1405341, overlap 1405332 1405330 AAAATACCAATAAAA GCTTTTCAAGTAA AAC TGACTTGAAAAGC TTTTATTTGCTCTTT TERM 1541 1405341 - 1405369 + F 100 -11.9 -5.00923 | opp_overlap 1405341 1405332 1405330, overlap 1405336 1405332 AAAATACCAATAAAA GCTTTTCAAGTAA AAC TGACTTGAAAAGC TTTTATTTGCTCTTT SMU.1480 1405637 - 1406278 + | hypothetical protein TERM 1542 1406267 - 1406289 + T 91 -7.1 -5.2291 | gap 1, opp_overlap 1406266, overlap 1406258 1406276 CCACCCCAATTGAAG CCAGCCAGAT AAAA ATCTG-CTGG TTTTTATTGTCATCT SMU.1482c 1406969 - 1406343 - | hypothetical protein SMU.1483c 1407421 - 1406966 - | hypothetical protein SMU.1484c 1408824 - 1407505 - | hypothetical protein TERM 1543 1407767 - 1407786 + g 75 -2.1 -5.37345 | TGAAACAAATCCTCT CTGGCAA TACCCT TTTCCAG TTTTTTATACTTAGC SMU.1485c 1410514 - 1408811 - | putative endonuclease TERM 1544 1409357 - 1409377 + g 73 -2.6 -5.3236 | opp_overlap 1409372 CTCCCCGCGGTTGAT TTCGTC GATAATAAA GACGAA TTTTTTGTCAGTTGT SMU.1486c 1411255 - 1410521 - | hypothetical protein TERM 1545 1412257 - 1412275 + G 82 -11 -3.30159 | GAAATTATGAAAGCC GTTCTGCC TCA GGCGGAAC TTATGAAGCGATTGC SMU.1487 1411476 - 1412621 + | hypothetical protein TERM 1546 1412659 - 1412629 - T 100 -11.3 -4.8622 | opp_overlap 1412629 GGGGTTAAGTAAAAA TCCATTTGGAGCA TTATC TTCTCCAAATGGA TTTTTAGACTGTTTT TERM 1547 1412629 - 1412659 + T 100 -11.3 -4.69464 | opp_overlap 1412629 GGGGTTAAGTAAAAA TCCATTTGGAGCA TTATC TTCTCCAAATGGA TTTTTAGACTGTTTT SMU.1488c 1413085 - 1412816 - | hypothetical protein lacX 1414001 - 1413105 - | LacX TERM 1548 1414077 - 1414046 - R 86 -7.4 -4.77698 | gap 1, opp_overlap 1414047, overlap 1414047 TAACATTAAAACAAA GCAAGAGTG-CAATC AAA GACTGTCACTCTTGT TTTTATTGCTGTCTT TERM 1549 1414076 - 1414047 - R 87 -10.9 -3.44992 | gap 1, opp_overlap 1414047, overlap 1414046 AACATTAAAACAAAG CAAGAGTG-CAATC AAA GACTGTCACTCTTG TTTTTATTGCTGTCT TERM 1550 1414047 - 1414076 + r 95 -8.7 -5.17744 | gap 1, opp_overlap 1414047 1414046 AACATTAAAACAAAG CAAGAGTG-CAATC AAA GACTGTCACTCTTG TTTTTATTGCTGTCT lacG 1415654 - 1414248 - | 6-phospho-beta-galactosidase lacE 1417372 - 1415666 - | PTS system, lactose-specific enzyme IIBC EIIBC-LAC) TERM 1551 1415710 - 1415693 - G 70 -7 -3.85698 | TTGTTCTTCCACAAA GGCAAG CGCTCC CTTGCC ATCACGCGTCAAACC lacF 1417693 - 1417379 - | PTS system, lactose-specific enzyme IIA EIIA-LAC) lacD 1418686 - 1417709 - | tagatose 1,6-diphosphate aldolase TERM 1552 1417795 - 1417813 + g 71 -4.5 -4.7173 | gap 1, overlap 1417785 CTGTACGAAGCCACT GGCG-GGC TGCT GCTTCGCC TTTTTCAATATAATC lacC 1419623 - 1418691 - | tagatose-6-phosphate kinase lacB 1420157 - 1419642 - | galactose-6-phosphate isomerase subunit LacB lacA 1420611 - 1420183 - | galactose-6-phosphate isomerase subunit LacA TERM 1553 1420220 - 1420234 + g 79 -10 -3.39844 | overlap 1420218 TCTACACGGATCTGA TGACGG CCG CCGTCA TATTTAGCCTCTACA TERM 1554 1420643 - 1420662 + r 74 -7.2 -4.03179 | ATGATTTTTTAGTCA GAAAAGCG TTTT CGTTTTTC TTTAGTTATAATATA TERM 1555 1420686 - 1420725 + r 100 -9.7 -4.94672 | opp_overlap 1420685 1420684 TAATATACTATAACT TGTTTAAAAAATCAACA CATTTT TGTTTATTTTTTAAACA TTTTTGGTATTATTT lacR 1421673 - 1420918 - | lactose repressor TERM 1556 1421005 - 1420988 - G 75 -9.9 -2.91199 | opp_overlap 1420969 CAATCTGTAATCAGA GCTGTCA ATTG TGACAGC TGATAAAATGACGTA TERM 1557 1421191 - 1421161 - G 88 -9.3 -4.56775 | opp_overlap 1421160 1421161 ATTGCCGCTGAAAAA CATTTTAGAAAAA TGCAT TTTTTCTAAAACG ATATTTGTTATTTCT TERM 1558 1421808 - 1421765 - R 74 -7.8 -3.9281 | opp_overlap 1421766 1421803, overlap 1421767 1421803 ATTACGTTTAAATAA CAGTTCTTTTCATAAATA AAAAAGAG TATTTATGAAAAGAACCT CCTTATAAGAACAGT TERM 1559 1421766 - 1421807 + r 73 -9.1 -2.82623 | opp_overlap 1421765 1421767 1421803, overlap 1421803 TTACGTTTAAATAAC AGTTCTTTTCATAAATA AAAAAGAG TATTTATGAAAAGAACC TCCTTATAAGAACAG TERM 1560 1421806 - 1421767 - R 91 -12.6 -3.55202 | opp_overlap 1421766 1421803, overlap 1421765 1421803 TACGTTTAAATAACA GTTCTTTTCATAAATA AAAAAGAG TATTTATGAAAAGAAC CTCCTTATAAGAACA rexA 1425536 - 1421898 - | putative exonuclease RexA TERM 1561 1423523 - 1423536 + g 73 -3.9 -5.10033 | TTCTGGCATTCTCCA TCTTT TCAT AAAGA TTTTGTTTGTGTTGA rexB 1428768 - 1425526 - | putative exonuclease RexB TERM 1562 1428454 - 1428431 - G 83 -8.2 -4.43501 | AATTGATTGATAAAA TGAGCATCTT GCTT AAGACGCCCA AAAACTCGCAAATCT SMU.1502c 1429885 - 1429640 - | hypothetical protein SMU.1504c 1430386 - 1430060 - | hypothetical protein SMU.1505c 1430869 - 1430750 - | hypothetical protein TERM 1563 1431234 - 1431211 - R 76 -5.4 -5.07107 | opp_overlap 1431211 TAAAGTTCTAAAAAA GACTTGTA TTACTCCC TACAAGTC TTACATTGTCATTTT SMU.1506c 1432515 - 1431235 - | hypothetical protein TERM 1564 1432193 - 1432182 - G 76 -3 -5.4588 | CAAAACCATAAAAAA CTTT CAAA AAAG GTCTGCTCAATCCCA TERM 1565 1432387 - 1432373 - G 79 -4.3 -5.29885 | AATGCAAAAAGAAAA TTCTG GATAA CAGAA ATGCCAGACAAGGCA SMU.1507c 1432835 - 1432512 - | hypothetical protein SMU.1508c 1433947 - 1432832 - | putative coenzyme PQQ synthesis protein TERM 1566 1433993 - 1433967 - R 100 -11 -5.02476 | opp_overlap 1433966 ATACCTCCTAAAAAA TCTGTAAGCCAT GCA ATGACCTACAGA CCTTGTTTTACTAGT rgg 1435010 - 1434153 - | putative transcriptional regulator TERM 1567 1435221 - 1435186 - R 86 -11.4 -2.90212 | opp_overlap 1435195, overlap 1435195 TCACTAGCTTACATA CCAAAAAAATCTACCT TTAA AGGTAGATTTTTTCGT TATCTCACTTCAGCA TERM 1568 1435212 - 1435195 - R 100 -8.5 -5.60864 | opp_overlap 1435195, overlap 1435186 TACATACCAAAAAAA TCTACCT TTAA AGGTAGA TTTTTTCGTTATCTC TERM 1569 1435195 - 1435212 + r 100 -8.5 -5.35354 | opp_overlap 1435195 1435186 TACATACCAAAAAAA TCTACCT TTAA AGGTAGA TTTTTTCGTTATCTC TERM 1570 1435226 - 1435264 + r 100 -11.1 -5.15381 | GATTTTTTCGTTATC TCACTTCAGCACCAACT TTTTC GGTTAGGGCTGAAGTGA TTTTTTCCATGTATT pheT 1437626 - 1435221 - | phenylalanyl-tRNA synthetase subunit beta SMU.1511c 1438161 - 1437640 - | putative acetyltransferase pheS 1439277 - 1438234 - | phenylalanyl-tRNA synthetase subunit alpha TERM 1571 1439354 - 1439323 - R 100 -7.3 -6.20267 | TTAAAAACAAAAAAA GTGCCAAAACTCC TTAAGC GGAGCGTTGACAC GCGGTACCATCCGTT smc 1443254 - 1439718 - | putative chromosome segregation ATPase; SMC protein TERM 1572 1440509 - 1440525 + g 86 -8.1 -4.56636 | opp_overlap 1440512 ATTGCGTTTGCTGAC GAATGAA CTC TTCATTC TTTTGATTAGTTTTT TERM 1573 1442509 - 1442523 + g 77 -6.4 -4.66163 | overlap 1442510 TTTTGTTTAACTTTT TCAAGC TCA GCTTGG TTTTTCACTAAGGCT rnc 1443949 - 1443254 - | ribonuclease III TERM 1574 1443288 - 1443310 + g 88 -3.5 -5.72207 | TTTTCAAGCGCATTT TTAGCAG CCTCTTGCT CTGCTAA TTTTTTTGATTTGCC covX 1444859 - 1444056 - | hypothetical protein covS 1446208 - 1444856 - | putative histidine kinase CovS; VicK-like protein TERM 1575 1445093 - 1445074 - G 70 -5 -4.67168 | AAAAACGGTCAAAAA TAAGAGGG AGAT CCTTCTTA GGAATACCCAAGCCT TERM 1576 1445720 - 1445739 + g 91 -8.6 -4.91511 | ATATTCATCACGCCG CGTCAGAA CAAT TTCTGGCG TTTTTGTAATCAAAT covR 1446908 - 1446201 - | putative response regulator CovR; VicR-like protein TERM 1577 1447708 - 1447696 - g 74 -5.5 -4.82901 | TCTGGCGGACAAAAA CAGCG TAT CGCTA TTGCACGCGGACTAG glnQ 1447261 - 1448043 + | putative amino acid ABC transporter, ATP-binding protein SMU.1520 1448040 - 1448852 + | putative ABC transporter, glutamine binding protein SMU.1521 1448870 - 1449574 + | putative amino acid ABC transporter, permease protein glnP 1449589 - 1450239 + | putative amino acid ABC transporter, integral membrane protein TERM 1578 1450244 - 1450272 + T 100 -9.8 -5.81622 | gap 1, opp_overlap 1450232 1450244 CAACGGACTAAAAAA TCAGTCTGGATAT CAAA AT-TCCAGACTGA TTTTTTTACTTTTAT TERM 1579 1450272 - 1450244 - T 100 -9.8 -5.18357 | gap 1, opp_overlap 1450244, overlap 1450232 CAACGGACTAAAAAA TCAGTCTGGATAT CAAA AT-TCCAGACTGA TTTTTTTACTTTTAT endA 1451188 - 1450307 - | putative membrane nuclease EndA TERM 1580 1451233 - 1451219 - R 83 -5.7 -5.2112 | opp_overlap 1451219 AATACCATTAAAAAA GTAGG CTAAT CCTAC TTTCCAGTAAATTTA SMU.1524c 1451418 - 1451230 - | hypothetical protein murA 1452692 - 1451421 - | UDP-N-acetylglucosamine 1-carboxyvinyltransferase SMU.1526c 1452967 - 1452758 - | hypothetical protein TERM 1581 1453250 - 1453227 - R 74 -2.3 -5.55769 | opp_overlap 1453227, overlap 1453220 CTGTACAACAAAAAA GCTGGAGCA CTTTTT TGTGCCAGC CTCTTTTTGTTTCTT atpC 1453680 - 1453264 - | F0F1 ATP synthase subunit epsilon atpB 1455100 - 1453694 - | F0F1 ATP synthase subunit beta TERM 1582 1454094 - 1454073 - G 70 -7.3 -3.76839 | opp_overlap 1454084 GAACTTGAAGCTAAA GGATCCACC GCTG GGTAAATCC CCATTTGTGTCAGAC atpC 1456004 - 1455126 - | F0F1 ATP synthase subunit gamma atpD 1457528 - 1456023 - | F0F1 ATP synthase subunit alpha atpE 1458080 - 1457544 - | F0F1 ATP synthase subunit delta TERM 1583 1458051 - 1458067 + g 79 -2.1 -5.66684 | overlap 1458053 ACTCTTGGCATAGAT CTCAGTC ACA GCCTGCG TTTTTTTATCCATTA atpF 1458577 - 1458080 - | F0F1 ATP synthase subunit B TERM 1584 1458133 - 1458143 + g 73 -4 -5.07053 | AGTCACCTTGAGCTG TCTT ATC AAGA TTTTTTGCCATAATT atpG 1459314 - 1458595 - | F0F1 ATP synthase subunit A TERM 1585 1458990 - 1458968 - G 70 -4.8 -4.56802 | opp_overlap 1458974 1458988, overlap 1458969 AAAGAAAGACCAAAA TCAACTGCAA AAT TTGCTGTTGG GGAAGTCCATAAATT TERM 1586 1458989 - 1458969 - G 70 -8.3 -3.31641 | opp_overlap 1458974 1458988, overlap 1458968 AAGAAAGACCAAAAT CAACTGCAA AAT TTGCTGTTG GGGAAGTCCATAAAT atpH 1459547 - 1459344 - | F0F1 ATP synthase subunit C TERM 1587 1459772 - 1459745 - R 100 -12.9 -5.06451 | opp_overlap 1459745 TATTAGGTCAAAAAA GAGACTTAGAC GCTTTT GTCTAAGTCTC TTATTGGGAAGGCTT TERM 1588 1459745 - 1459772 + r 100 -13.6 -3.61894 | opp_overlap 1459745 TATTAGGTCAAAAAA GAGACTTAGACG CTTT TGTCTAAGTCTC TTATTGGGAAGGCTT phsG 1462182 - 1459786 - | glycogen phosphorylase TERM 1589 1460153 - 1460129 - G 87 -12.3 -2.90688 | opp_overlap 1460127, overlap 1460117 1460149 TAATGACGGTAGACA TCATCCTTGGT CAT ACCAAAGATGA CAATATTCTCATCAC TERM 1590 1462205 - 1462224 + r 82 -8.6 -4.08939 | opp_overlap 1462208, overlap 1462208 CTTTCATAAGGGACA GGACTAGC CTAA GCTAGTTC TTTATATAGATGTTC TERM 1591 1462208 - 1462221 + r 74 -6.7 -4.15698 | opp_overlap 1462208, overlap 1462205 TCATAAGGGACAGGA CTAGC CTAA GCTAG TTCTTTATATAGATG glgA 1463643 - 1462213 - | glycogen synthase glgD 1464773 - 1463640 - | putative glycogen biosynthesis protein GlgD TERM 1592 1464690 - 1464679 - G 70 -5.8 -4.3129 | TATTTACCATCAAAA GGCA GATT TGCC AAGGGACGCGTATCT glgC 1465908 - 1464763 - | glucose-1-phosphate adenylyltransferase glgB 1467814 - 1465928 - | glycogen branching enzyme TERM 1593 1466013 - 1466028 + g 70 -6.2 -4.2535 | TTTTCATATTCCTTC CACAAA TTTT TTTGTG TTTTGACTGTCATAT TERM 1594 1468012 - 1468033 + r 100 -10.3 -5.63103 | opp_overlap 1468012 ATAAGAAAACAAAAA TAATCCAAG AAAA CTTGGATTA TTTTTTTAATTCAAA TERM 1595 1468033 - 1468012 - R 100 -10.3 -5.64321 | opp_overlap 1468012 ATAAGAAAACAAAAA TAATCCAAG AAAA CTTGGATTA TTTTTTTAATTCAAA pulA 1470262 - 1468031 - | putative pullulanase TERM 1596 1468813 - 1468825 + g 76 -4.9 -5.11033 | CAATACGCGGCATTT GATAA GCA TTATC TTTTTTAGCCTTATC TERM 1597 1469951 - 1469937 - G 72 -2.1 -5.18726 | overlap 1469938 TCTTGATAAGAAAAA CCAAG CCAGC CTTGA AAACCCCATTCATAA SMU.1542c 1471404 - 1470361 - | putative lipid kinase ligA 1473375 - 1471417 - | NAD-dependent DNA ligase LigA TERM 1598 1471635 - 1471649 + g 83 -5.7 -5.40474 | opp_overlap 1471634 1471635 TCATCCCAGTTAAAG CAGCA TCACT TGCTG TTTTTTTGCCGAGAT TERM 1599 1473225 - 1473243 + g 74 -6 -4.6902 | opp_overlap 1473225 TCGGACTATTAGGAA GAATATCC TCT GGAAATTC TTTTTCAAGTTCTAC TERM 1600 1473587 - 1473568 - R 100 -8 -5.60993 | opp_overlap 1473568 1473566 1473571 TGTCTCATAAAAAAA TAATCTTC CGAA GAAGATTA TCTTGTAAAATCTAT TERM 1601 1473568 - 1473587 + r 71 -8 -3.24633 | opp_overlap 1473568, overlap 1473566 1473571 TGTCTCATAAAAAAA TAATCTTC CGAA GAAGATTA TCTTGTAAAATCTAT SMU.1545c 1474097 - 1473585 - | hypothetical protein SMU.1546 1474220 - 1474678 + | hypothetical protein TERM 1602 1474689 - 1474670 - T 82 -2.8 -5.93252 | TTTAAAAATAAAAAA GAGAGC TAATCAGG GCTCCC TACAACCAATCATTC TERM 1603 1474719 - 1474744 + T 84 -3.4 -5.88565 | gap 1 CCTTTTGTTAAAAAA TTCAGT-TCTG CAAAA CAGGTACTGAA TTTTTTTCTTCTGCA SMU.1547c 1475357 - 1474761 - | putative response regulator SMU.1548c 1476364 - 1475354 - | putative histidine kinase TERM 1604 1476158 - 1476146 - G 71 -3.3 -5.10601 | overlap 1476147 AGAAAAGGATAAAAA GCGGT AAG ACCGG TAGCTGTCTCCAAAC SMU.1550c 1477190 - 1476453 - | integral membrane protein SMU.1551c 1478068 - 1477187 - | putative ABC transporter, ATP-binding protein TERM 1605 1477638 - 1477622 - G 70 -5.1 -4.56597 | TGGCTCGTCTAAAAA GAGAACC TTA GGTTTTC CAATCAGACAAAGGA TERM 1606 1477848 - 1477862 + g 85 -2.8 -5.75599 | AGGAGAACTGCTACC TGAGCT TTG GGCTTA TTTTTTTGTCCTTTA SMU.1552c 1478470 - 1478105 - | hypothetical protein SMU.1553c 1478654 - 1478460 - | hypothetical protein SMU.1554c 1478860 - 1478663 - | hypothetical protein TERM 1607 1478997 - 1478973 - R 90 -5.8 -5.58522 | overlap 1478988 TAGACAAAAGAAAAA GACAAACCTC AACAA GAAGTTTATC TTCGGTTTGAAATAG SMU.1555c 1479948 - 1479016 - | hypothetical protein ampM 1480820 - 1479960 - | methionine aminopeptidase SMU.1557c 1482121 - 1480838 - | hypothetical protein TERM 1608 1481454 - 1481466 + g 86 -5.5 -5.63103 | TTGATAATAGGATAG CGGAC ATG GTTCG TTTTTTTGATTAAAC SMU.1558c 1482668 - 1482114 - | putative acetyltransferase TERM 1609 1482779 - 1482804 + H 72 -9.2 -2.72511 | opp_overlap 1482784, overlap 1482778 TTCATCAACCCTTCA TGATAGAACT ATAAGC AGTTCTATCA CTTTCACAACATAAA SMU.1560 1483157 - 1483570 + | hypothetical protein TERM 1610 1483580 - 1483619 + T 78 -6.8 -4.47397 | gap 1, opp_overlap 1483587, overlap 1483587 AGTTAAGTTATACTA TTAA-AAATTCCATTCAAT GAT ATTGAATGGAATTTCTTCG TTTTCATCTCTTTAT TERM 1611 1483611 - 1483587 - T 100 -13.1 -4.79223 | opp_overlap 1483580 1483587 TTATACTATTAAAAA TTCCATTCAAT GAT ATTGAATGGAA TTTCTTCGTTTTCAT TERM 1612 1483587 - 1483611 + T 100 -13.1 -4.46669 | opp_overlap 1483587, overlap 1483580 TTATACTATTAAAAA TTCCATTCAAT GAT ATTGAATGGAA TTTCTTCGTTTTCAT TERM 1613 1483686 - 1483662 - T 70 -7.1 -3.70039 | opp_overlap 1483662 1483663 1483669, overlap 1483663 AAAGTGCAAAACTAA CGGAACAGCTG CGC CAGCTTTTCCT GATTTTGACTGTTAG TERM 1614 1483685 - 1483663 - T 81 -10.6 -2.80939 | opp_overlap 1483662 1483663 1483669, overlap 1483662 AAGTGCAAAACTAAC GGAACAGCTG CGC CAGCTTTTCC TGATTTTGACTGTTA TERM 1615 1483663 - 1483685 + T 83 -10.6 -3.13737 | opp_overlap 1483663 1483662, overlap 1483662 1483669 AAGTGCAAAACTAAC GGAACAGCTG CGC CAGCTTTTCC TGATTTTGACTGTTA TERM 1616 1483669 - 1483679 + T 78 -6.8 -4.42667 | opp_overlap 1483663 1483662, overlap 1483663 1483662 AAAACTAACGGAACA GCTG CGC CAGC TTTTCCTGATTTTGA trkB 1484317 - 1483658 - | putative potassium uptake system protein TrkB trk 1484984 - 1484331 - | putative potassium uptake protein TrkA pacL 1487813 - 1485021 - | putative cation-transporting P-type ATPase PacL TERM 1617 1487704 - 1487727 + g 73 -8.2 -3.65754 | AACTCTTGCCGCTTT TGAACTTGAG AAGC CTCAAGTCCA TTTGAACTGGTTTGT TERM 1618 1488032 - 1487986 - R 80 -5.5 -5.24129 | gap 2 TCTCTCTATAAAAAA GCGATTGAATTTCTATTCCAAAT TTT AACTGAAATAGA--TTCAATCGC TTTTCTTTTTTAAGT glgP 1490361 - 1488085 - | putative glycogen phosphorylase TERM 1619 1488291 - 1488306 + gr 70 -2.6 -5.08824 | gap 1, opp_overlap 1488291 1488293, overlap 1488293 TAAGCTCATGGTAAA G-ACGTT CTA AACGTTC TTTTTTACCTAGCGC TERM 1620 1488293 - 1488303 + gr 72 -5.4 -4.64763 | opp_overlap 1488291 1488293, overlap 1488291 AGCTCATGGTAAAGA CGTT CTA AACG TTCTTTTTTACCTAG TERM 1621 1488490 - 1488450 - GR 71 -4.2 -4.73388 | gap 1 AATCCTTACCAAAAA TGTAGATATTATCTGAACC GACA AGTTCAG-CAATCTCCACA TTGGCACCATCCATC TERM 1622 1489410 - 1489432 + gr 93 -10 -4.61633 | CTTCTGCTAAAATCG TATGGTTGGT ATA ACCAATCATA TTTTTCACAATATCT TERM 1623 1490211 - 1490224 + gr 72 -5.3 -4.61633 | AGATATAATATACTT TACGT TTAG ACGTA TTTTTAGGCATGTCT malQ 1491862 - 1490333 - | putative 4-alpha-glucanotransferase TERM 1624 1491967 - 1491953 - R 95 -4.3 -6.28401 | opp_overlap 1491953, overlap 1491955 CAAAAAATAAAAAAA GCTTA GAAAT TAAGC TTCTAATCTCTAGCT malR 1492996 - 1491977 - | putative maltose operon transcriptional repressor TERM 1625 1493122 - 1493108 - H 73 -4.3 -5.12068 | opp_overlap 1493108, overlap 1493102 1493097 CAGATTGAAGAAAAA GTCTT TCTTT AAGAC TTTCCTTATAAAGTA malX 1493243 - 1494490 + | putative maltose/maltodextrin ABC transporter, sugar-binding protein MalX TERM 1626 1494498 - 1494526 + F 100 -11.9 -4.22214 | opp_overlap 1494498 1494501, overlap 1494501 CTAAATAAAACATCA TAAGTGAGGGGAT TAA ATCTTCTCACTTA TTCTTTTAACTGAAT TERM 1627 1494501 - 1494523 + F 88 -9.2 -4.22475 | opp_overlap 1494498 1494501, overlap 1494498 AATAAAACATCATAA GTGAGGGGAT TAA ATCTTCTCAC TTATTCTTTTAACTG TERM 1628 1494877 - 1494893 + G 76 -5.2 -5.10516 | TGATGCTCATTTTTG GATTAG CCTCA CTAATC TTTTGTTTGGTTTTT malF 1494567 - 1495928 + | putative maltose/maltodextrin ABC transporter, permease protein MalF malG 1495928 - 1496764 + | putative maltose/maltodextrin ABC transporter, MalG permease TERM 1629 1497639 - 1497627 - g 72 -2 -5.22312 | AGGGACAGGAAAAAA TTCT TGAGG AGAA AGGTTATCTTGGTAA SMU.1571 1496789 - 1497922 + | putative ABC transporter, ATP-binding protein, MsmK-like protein TERM 1630 1497977 - 1498028 + T 100 -19.8 -2.86449 | opp_overlap 1497982, overlap 1497982 TTTGAGATGGACTAA AAAAACAGCCTATCAAGCTGAATG TTTT TAATCAGCTTGATAGGCTGTTTTA TAGTTGTAATCGACT TERM 1631 1497982 - 1498023 + T 100 -19.7 -4.59069 | opp_overlap 1497982, overlap 1497977 GATGGACTAAAAAAA CAGCCTATCAAGCTGAATG TTTT TAATCAGCTTGATAGGCTG TTTTATAGTTGTAAT TERM 1632 1498023 - 1497982 - T 100 -19 -5.53991 | opp_overlap 1497982 1497977 GATGGACTAAAAAAA CAGCCTATCAAGCTGAAT GTTTTT AATCAGCTTGATAGGCTG TTTTATAGTTGTAAT murZ 1499312 - 1498053 - | UDP-N-acetylglucosamine 1-carboxyvinyltransferase TERM 1633 1499460 - 1499432 - R 89 -11.1 -3.59995 | opp_overlap 1499439 1499440, overlap 1499440 TGAAATTTATAAACA CAAAAAAAGCGGA AAA TCCGCCTTTTATG CTTGGACAGCCTTTT TERM 1634 1499439 - 1499453 + r 71 -5.6 -4.5442 | opp_overlap 1499432 1499440, overlap 1499440 TATAAACACAAAAAA AGCGGA AAA TCCGCC TTTTATGCTTGGACA TERM 1635 1499440 - 1499452 + r 77 -9.1 -3.3217 | opp_overlap 1499432 1499440, overlap 1499439 ATAAACACAAAAAAA GCGGA AAA TCCGC CTTTTATGCTTGGAC TERM 1636 1499452 - 1499440 - R 100 -9.1 -5.90231 | opp_overlap 1499440 1499439, overlap 1499432 ATAAACACAAAAAAA GCGGA AAA TCCGC CTTTTATGCTTGGAC metK 1500649 - 1499456 - | S-adenosylmethionine synthetase TERM 1637 1499848 - 1499829 - G 83 -7.1 -4.91109 | gap 1, overlap 1499832 TCCTTACCAGAAAAA GCACCGCC GCCAT GGCGG-GC ATAACCACCATAAGT TERM 1638 1499846 - 1499832 - G 70 -8.5 -3.34102 | overlap 1499829 TTACCAGAAAAAGCA CCGCC GCCAT GGCGG GCATAACCACCATAA TERM 1639 1501247 - 1501226 - R 100 -10.9 -5.42259 | opp_overlap 1501226 CTACCCGCAAAAAAA TCCCAGTCC GAAT GGACTGAGA TTCTTAGGAGATTTA TERM 1640 1501226 - 1501247 + r 77 -8.7 -3.64283 | opp_overlap 1501226 CTACCCGCAAAAAAA TCCCAGTCC GAAT GGACTGAGA TTCTTAGGAGATTTA SMU.1574c 1502491 - 1501433 - | hypothetical protein TERM 1641 1501499 - 1501509 + g 80 -2.6 -5.626 | ATCAATCGAAGGAGC TTTT TCT AAAA TTTTTTTGTAAAATA SMU.1575c 1503105 - 1502821 - | hypothetical protein SMU.1576c 1505134 - 1503086 - | hypothetical protein SMU.1577c 1508940 - 1505191 - | hypothetical protein TERM 1642 1507260 - 1507270 + g 78 -5.4 -5.1471 | overlap 1507257 CAAACTCCTCTTCAT TAGC AAT GCTA TTTATTTTTTCTCGT TERM 1643 1509382 - 1509403 + GH 76 -2.9 -5.41143 | overlap 1509384 GTTAAGAATCGTGGA TATCGCTTG CTTT CGGGCGATC TTTTTTTACCGGATG TERM 1644 1510018 - 1509994 - gH 100 -7.2 -5.38054 | GTCTACAAAGAAAAA TCACTCGTCC TAGAT AGACAAGTGA CCTTTGTGGAAAATG birA 1509217 - 1510152 + | biotin--protein ligase SMU.1579 1510124 - 1510324 + | hypothetical protein TERM 1645 1510370 - 1510349 - T 75 -2.4 -5.52986 | ATTGTACCAAAAAAA GAAAATTC ATGTTA AAATTTTC TTTTAAAAAGTCACA TERM 1646 1510396 - 1510417 + T 90 -5.9 -5.68023 | opp_overlap 1510396 TCACATAATCTAAAA GAAAATCCC TATC GGAATTTTC TTTTTTTGATTATGG TERM 1647 1510417 - 1510396 - T 83 -8.1 -4.34267 | opp_overlap 1510396 TCACATAATCTAAAA GAAAATCCC TATC GGAATTTTC TTTTTTTGATTATGG dnaX 1512103 - 1510427 - | DNA polymerase III subunits gamma and tau TERM 1648 1510927 - 1510953 + g 79 -2.2 -5.57054 | TGGTCACTTTGAAAG GCTTGCCTTTTT CCA GAGATTGCAAGC TTTTTTTGAGTTCTT SMU.1582c 1512600 - 1512103 - | hypothetical protein TERM 1649 1512499 - 1512523 + g 70 -4.9 -4.56702 | overlap 1512500 1512517 ATTCAGCATGGCTGT AGCATTGGCTA AAT TGGCCAAAGCA TTTGTTTCATTGGCA TERM 1650 1512500 - 1512522 + g 70 -8.4 -3.33298 | overlap 1512499 1512517 TTCAGCATGGCTGTA GCATTGGCTA AAT TGGCCAAAGC ATTTGTTTCATTGGC SMU.1584c 1514686 - 1512917 - | putative 67 kDa myosin-crossreactive streptococcal antigen-like protein TERM 1651 1514803 - 1514751 - R 100 -7.9 -5.50499 | GCAGATCCAAAAAAA TAGACAATAAAAAAGGGCTGCCTAA AAA TCTGACAGAACTTTTTAATTGTCTA ACTATAAACTTTCCA SMU.1585c 1515329 - 1514805 - | putative transcriptional regulator TERM 1652 1515494 - 1515444 - R 74 -9.2 -3.024 | opp_overlap 1515456, overlap 1515456 CAATATATCAAATTA CTAGACAAAAAAGACTGAAAGCCC AAT GGAACTTCAGTCTCTCTTATTTAG CATCAGCCGATTTCA TERM 1653 1515482 - 1515456 - R 100 -8 -5.39721 | opp_overlap 1515456, overlap 1515444 TTACTAGACAAAAAA GACTGAAAGCCC AAT GGAACTTCAGTC TCTCTTATTTAGCAT thrS 1517582 - 1515633 - | threonyl-tRNA synthetase TERM 1654 1517497 - 1517515 + g 70 -7.5 -3.59247 | opp_overlap 1517496 TTCTTTGCAAGAGAC TTGCTGA TAGAC TCAGCAA TTTCAGACGTTGTTG SMU.1587c 1518217 - 1517579 - | hypothetical protein TERM 1655 1518199 - 1518189 - G 71 -8.2 -3.4072 | GACTTCCCACTACAA GGCG ATC CGCC AATCATATAAATCAC TERM 1656 1518265 - 1518244 - R 100 -10.9 -5.54907 | CTGACAAAAGAAAAA CGACATCCT TAAA AGGACGTCG CAACGTGGTTCCACC SMU.1588c 1519816 - 1518482 - | putative hexosyltransferase TERM 1657 1518857 - 1518841 - G 70 -8.1 -3.3579 | opp_overlap 1518841, overlap 1518839 AAAGCGTTCCAAACA TCTTATC TGT GATAAGA TCATCTAAATAAGGA SMU.1589c 1520816 - 1519818 - | putative hexosyltransferase TERM 1658 1520549 - 1520538 - G 75 -4.4 -5.02074 | GTATTTTTTAAAAAA TGGA GCAA TCCA ATTAGAACCAACAAA amyA 1522396 - 1520936 - | cytoplasmic alpha-amylase TERM 1659 1522444 - 1522418 - R 76 -7.4 -4.25104 | opp_overlap 1522420 TCCCTTTTATGAAAA GAGTCCAGAA TATAAAC TTCTAGACTC CTTGACTGTGCTGTA ccpA 1523545 - 1522544 - | catabolite control protein A, CcpA TERM 1660 1522904 - 1522919 + g 83 -7.6 -4.60255 | opp_overlap 1522896 1522894 AACAAGTCCTTCTTT GAAAGG CAAT CCTTTC TTTTTCAGGCCTTCT pepQ 1523708 - 1524787 + | putative dipeptidase PepQ TERM 1661 1524809 - 1524860 + T 100 -12.7 -3.33492 | opp_overlap 1524814, overlap 1524814 CTCAAAGAACATGAT AAAAAGCATATCTTCTTAGTGCT TTAATT GGTATTAAGAAGATATGCTTTTA TTATGAACTGAGTGC TERM 1662 1524814 - 1524855 + T 100 -12.6 -4.78237 | opp_overlap 1524814, overlap 1524809 AGAACATGATAAAAA GCATATCTTCTTAGTGCT TTAATT GGTATTAAGAAGATATGC TTTTATTATGAACTG TERM 1663 1524855 - 1524814 - T 89 -7.5 -4.9934 | opp_overlap 1524814 1524809 AGAACATGATAAAAA GCATATCTTCTTAGTGC TTTAATTG GTATTAAGAAGATATGC TTTTATTATGAACTG SMU.1593c 1525444 - 1524878 - | putative CDP-diglyceride synthetase TERM 1664 1525186 - 1525174 - G 85 -4.9 -5.51402 | overlap 1525176 ACAGATTGAAAAAAA TATCA TTG TGATA ACTTTTCACTAATGA cah 1526356 - 1525586 - | putative carbonic anhydrase precursor TERM 1665 1525826 - 1525839 + g 77 -6.7 -4.64334 | GTTCTTTTTTGTCTC TGCCT TTTG AGGCA TTTTCTTCCAAACTT celD 1527980 - 1526622 - | cellobiose phosphotransferase system IIC component TERM 1666 1527856 - 1527839 - G 74 -5.6 -4.80167 | CACTAAAAACCAAAA CCATTG AACCAA CAATGG TAAAAGGAACAACAG SMU.1597c 1528514 - 1527996 - | hypothetical protein celC 1528845 - 1528534 - | cellobiose phosphotransferase system IIA component celR 1530836 - 1528845 - | putative transcriptional regulator; possible antiterminator TERM 1667 1530406 - 1530427 + g 78 -3.1 -5.44721 | opp_overlap 1530406 TCAATCTTTAAATGA TAAGGAA CAAAGCGT TTCCTTA TTTTTTTAAAATCAT celB 1531198 - 1530881 - | cellobiose phosphotransferase system IIB component TERM 1668 1531264 - 1531244 - R 100 -10.5 -5.31877 | ACCCATTATAAAAAA GCGCTTACA AAA TGTAAACGC ACAGTTTTTCCGTAT celA 1532863 - 1531430 - | 6-phospho-beta-glucosidase TERM 1669 1532163 - 1532137 - G 81 -10.2 -3.85817 | opp_overlap 1532137 1532158 AGGTTGCTGGATAAA TTGGACACATGG CAA CCATGCACCCAA TATTGAGATTGGGAT TERM 1670 1532947 - 1532927 - H 100 -7.7 -5.63645 | opp_overlap 1532927 TTAAAATAGAAAAAA TTTCCTTAA AGA CTAAGGAAA TTCTCATCTTAGGGC SMU.1602 1533196 - 1533861 + | putative NAD(P)H-flavin oxidoreductase TERM 1671 1534213 - 1534167 - g 71 -4.5 -4.74801 | gap 2, overlap 1534168 1534169 CAAGCGCATCAAAAA GCCGGCTATACTGTGACAGACCT TTC AGGTCTGCC-CGGTA-AGCCAAA GATGTACTACTTCAT TERM 1672 1534211 - 1534169 - g 71 -9.3 -2.65772 | gap 2, overlap 1534168 1534167 AGCGCATCAAAAAGC CGGCTATACTGTGACAGACCT TTC AGGTCTGCC-CGGTA-AGCCA AAGATGTACTACTTC lguL 1533897 - 1534289 + | putative lactoylglutathione lyase TERM 1673 1534335 - 1534302 - T 100 -16.9 -3.75733 | opp_overlap 1534307, overlap 1534307 TAAAATATATAAAGA TAAAAGGTCGGAACG AAAG CGTTCCGACCTTTTT AATGCGTCATAGTTT TERM 1674 1534307 - 1534330 + T 100 -16.8 -4.75372 | opp_overlap 1534307 1534302 TATATAAAGATAAAA GGTCGGAACG AAAG CGTTCCGACC TTTTTAATGCGTCAT TERM 1675 1534330 - 1534307 - T 100 -16.8 -4.87328 | opp_overlap 1534307, overlap 1534302 TATATAAAGATAAAA GGTCGGAACG AAAG CGTTCCGACC TTTTTAATGCGTCAT SMU.1604c 1535135 - 1534623 - | hypothetical protein TERM 1676 1535843 - 1535823 - g 89 -4 -5.67711 | opp_overlap 1535824, overlap 1535824 GAAAGAAAAGAAAAA GCCAAGAT TGATT ATCTTGGT GCTCTTATCAGTATG TERM 1677 1535842 - 1535824 - g 74 -7.5 -3.96966 | opp_overlap 1535824, overlap 1535823 AAAGAAAAGAAAAAG CCAAGAT TGATT ATCTTGG TGCTCTTATCAGTAT SMU.1605 1535259 - 1536944 + | putative MDR permease; transmembrane efflux protein smpB 1537442 - 1536975 - | SsrA-binding protein TERM 1678 1537389 - 1537400 + gT 84 -2.2 -5.79595 | TTCTAGAATCTCATA GTCA TGTC TGGC TTTTTTATTTTGAGC vacB 1539741 - 1537405 - | putative exoribonuclease R (RNase R) TERM 1679 1539817 - 1539772 - R 77 -4.1 -5.46629 | gap 1 AATATTTTAAAAAAA GAGAG-GAAGAAAACCTAAAAA TAT TATTAAGGTTCCCATCACTCTC TTATTTTAGGTGGTA TERM 1680 1540059 - 1540084 + r 74 -3.2 -5.38326 | opp_overlap 1540059 TCTAACAAAAACTTA GGAGTTGAGA CTACTT TCCCAACCCC TTTTTATTTACTTGA TERM 1681 1540125 - 1540108 - R 70 -6.3 -4.32067 | TACTTGATAAAACAA CAATTGC CAAG GCAATCG CAAGCCAAAAGAAGA secG 1540324 - 1540088 - | preprotein translocase subunit SecG rpmG 1540519 - 1540373 - | 50S ribosomal protein L33 SMU.1611c 1541688 - 1540519 - | putative permease; multi-drug resistance efflux pump SMU.1612c 1542646 - 1541810 - | hypothetical protein TERM 1682 1542435 - 1542415 - G 83 -9.7 -3.90425 | GATCCAAACCAAGAA CGCGCCTAG CTC CTAAACGCG CCAAACTAATCGTAT coaE 1543235 - 1542639 - | dephospho-CoA kinase TERM 1683 1542765 - 1542776 + g 72 -7.2 -3.95324 | CATTTGGCTGGCAAG GCGC TGCT GCGC TTCTTCTTGCGAATA fpg 1544053 - 1543232 - | formamidopyrimidine-DNA glycosylase SMU.1615c 1544628 - 1544104 - | hypothetical protein SMU.1616c 1545198 - 1544728 - | hypothetical protein era 1546142 - 1545243 - | GTP-binding protein Era TERM 1684 1546192 - 1546181 - R 77 -4.4 -5.1971 | overlap 1546175 1546186 ATGAAAAAGCAAAAA CCAA ATTT TTGG TACAAAAATAATCAA TERM 1685 1546200 - 1546186 - R 72 -5.8 -4.39092 | overlap 1546175 1546181 AAAGCAAAAACCAAA TTTTTG GTA CAAAAA TAATCAAGCCTGTCA dagK 1546576 - 1546163 - | diacylglycerol kinase TERM 1686 1546414 - 1546447 + g 79 -4.6 -5.27779 | gap 1, opp_overlap 1546413 1546414 1546416 1546420, overlap 1546416 CTTTAAAAACCAAAC CA-GCAATGACAGCT AAAAG AGCTGACACTGCATG TTTTTTCATATTACG TERM 1687 1546444 - 1546416 - G 74 -9.6 -3.14257 | opp_overlap 1546416 1546414, overlap 1546413 1546414 1546420 TTAAAAACCAAACCA GCAATGACAGCT AAAAG AGCTGACACTGC ATGTTTTTTCATATT SMU.1619c 1547048 - 1546554 - | putative metalloprotease TERM 1688 1546985 - 1546995 + g 95 -5.4 -5.68438 | opp_overlap 1546985 CGAATTCCAAAATAT CCAA AGT TTGG TTTTTTATTTCCTCA TERM 1689 1547179 - 1547159 - R 100 -10.5 -4.95155 | opp_overlap 1547159 GCGATATTATAAAAA GACAAGGAA ACG TTCCCTGTC TTTAACATCATTCGA TERM 1690 1547159 - 1547179 + r 75 -8.3 -3.63895 | opp_overlap 1547159 GCGATATTATAAAAA GACAAGGAA ACG TTCCCTGTC TTTAACATCATTCGA phoH 1548417 - 1547452 - | putative phosphate starvation-induced protein PhoH TERM 1691 1548481 - 1548465 - R 93 -8 -5.23316 | opp_overlap 1548464 1548465 CATTATACCAAAAAA TCACGC TAAAC GCGTGA CTTTAATGTGCCAAA SMU.1621c 1548699 - 1548484 - | hypothetical protein pmsR 1549205 - 1548696 - | methionine sulfoxide reductase A TERM 1692 1549266 - 1549250 - R 91 -7.3 -5.15634 | opp_overlap 1549250 1549240 1549261 TATTGTACCAAAAAA TCCCAGA AAA TCTGAGA TTTTTTCTTAGTTGT TERM 1693 1549250 - 1549266 + r 85 -5.1 -5.57396 | opp_overlap 1549250, overlap 1549240 1549261 TATTGTACCAAAAAA TCCCAGA AAA TCTGAGA TTTTTTCTTAGTTGT SMU.1623c 1550134 - 1549274 - | hypothetical protein TERM 1694 1549334 - 1549345 + g 80 -5.8 -5.15969 | opp_overlap 1549334 CCTAGCTTTCATTAA GCCT CCCA AGGC TTTTTTAAATTGACC TERM 1695 1550286 - 1550266 - R 85 -8.2 -4.45083 | opp_overlap 1550266 TTTACATTTACAAAA GGGAGTGG ATCTG CCACACCC TTCTCTTCTGCCCTT TERM 1696 1550266 - 1550286 + r 75 -8.2 -3.76226 | opp_overlap 1550266 TTTACATTTACAAAA GGGAGTGG ATCTG CCACACCC TTCTCTTCTGCCCTT frr 1550936 - 1550379 - | ribosome recycling factor pyrH 1552024 - 1551287 - | uridylate kinase TERM 1697 1552184 - 1552156 - R 74 -6.8 -4.2349 | opp_overlap 1552161, overlap 1552161 TTTTTATACCTAAAA TAAAAGAACAGC TAAAT GCCGTTCTTTTT CACTACTATTTATTT TERM 1698 1552179 - 1552161 - R 85 -6.7 -5.11836 | opp_overlap 1552161, overlap 1552156 ATACCTAAAATAAAA GAACAGC TAAAT GCCGTTC TTTTTCACTACTATT rplA 1552887 - 1552198 - | 50S ribosomal protein L1 rplK 1553410 - 1552985 - | 50S ribosomal protein L11 TERM 1699 1553113 - 1553127 + g 74 -5 -4.99947 | CTTGTGCACGCGTTA CTGAAG CAA CTTTAG TTTTGTTTGGTTCAC TERM 1700 1553518 - 1553532 + H 74 -8.6 -3.33967 | opp_overlap 1553518, overlap 1553517 ATTCTTTATAAAAAA CAAGGA TTT TCCTTG ATTTATTCTATTTTT TERM 1701 1553532 - 1553518 - H 95 -8.6 -5.24531 | opp_overlap 1553518 1553517 ATTCTTTATAAAAAA CAAGGA TTT TCCTTG ATTTATTCTATTTTT TERM 1702 1553858 - 1553842 - g 74 -5.2 -4.95155 | opp_overlap 1553825, overlap 1553836 GTCAGATCAGAAAAA GAAAGA CCTTT TCTTTC AGACGGTTCTTTAAA SMU.1628 1553598 - 1553951 + | hypothetical protein TERM 1703 1553973 - 1553998 + T 100 -7 -5.64321 | opp_overlap 1553972 1553973 CTTCATATTAAAAAG CAGATAAGTA CTAAAA TGCTTATCTG TTTTTCTTTTATTCT SMU.1629c 1556349 - 1554073 - | putative cell division protein; DNA segregation ATPase TERM 1704 1554845 - 1554867 + g 74 -9.9 -2.56596 | overlap 1554842 TCATCAACAACTTTC TGCAAGGCT TTGCT AGCCTTGCG TGGATTAGTCACAAC TERM 1705 1556081 - 1556061 - G 84 -9.1 -4.49314 | opp_overlap 1556065, overlap 1556064 1556065 1556069 GATCACTAAAAACAA TCACCAAAG TGC CTTTGATGA CACTTTGATCTTTCA TERM 1706 1556390 - 1556409 + H 88 -6.4 -5.33124 | overlap 1556380 AATTCCGCCTTTGTT GGACGG CGTGTTTT CCGTCC TTTTCTTTTATTCTT SMU.1631 1556533 - 1557309 + | putative peptidyl-prolyl cis-trans isomerase TERM 1707 1557357 - 1557307 - T 74 -2.3 -5.55769 | gap 1, opp_overlap 1557320, overlap 1557313 TTTGATAAGAAAAAA TAAAATTAAAAAACGAAGTTGA TTGTGATG TCAATTTCGTTTTTTT-TTTTA TAAAGTTTGTTGTCA TERM 1708 1557320 - 1557345 + T 100 -4.8 -6.69613 | opp_overlap 1557313 1557307 AATAAAATTAAAAAA CGAAGTTGAT TGTGAT GTCAATTTCG TTTTTTTTTTTATAA pfs 1558065 - 1557370 - | 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase SMU.1633c 1558399 - 1558076 - | hypothetical protein SMU.1634c 1558962 - 1558411 - | hypothetical protein glmU 1560351 - 1558972 - | putative UDP-N-acetylglucosamine pyrophosphorylase SMU.1636c 1560974 - 1560390 - | hypothetical protein TERM 1709 1560957 - 1560973 + g 70 -5.1 -4.58395 | TGACCTCTTCGTTTC TGCTTCC TCG GGAAACA TTTTTGAACCATACG SMU.1637c 1561282 - 1561076 - | hypothetical protein SMU.1638c 1561587 - 1561426 - | hypothetical protein metG 1563631 - 1561622 - | methionyl-tRNA synthetase TERM 1710 1561965 - 1561990 + g 70 -4.7 -4.66002 | overlap 1561967 1561970 GCCTTCTTCTCGTTT TTGAGCTCAAC TGTT GTTGGGTTCCA TTCTTTTTCTTCCTC TERM 1711 1563517 - 1563499 - G 80 -2.5 -5.65927 | gap 1, opp_overlap 1563499, overlap 1563516 CAGTCAAATAAAAAA CGTCATGA TTCA TCAT-ACG CTTATAGCGAGCCAA TERM 1712 1564098 - 1564076 - R 100 -11.4 -4.55023 | opp_overlap 1564071 1564070 1564078 1564080 TTGAACATCACAAAA GAGAGAACCA ATC TGATTCTCTC TCATGCTTAGTTAGC SMU.1641c 1564409 - 1564209 - | hypothetical protein SMU.1642c 1565114 - 1564482 - | hypothetical protein SMU.1643c 1565564 - 1565187 - | hypothetical protein SMU.1644c 1566742 - 1565939 - | hypothetical protein TERM 1713 1567276 - 1567264 - g 70 -2.7 -5.10933 | TTATTTAAAAGAAAA CAGTA AAA TACTA GACCTTGGATCCGGT SMU.1645 1566884 - 1567765 + | tellurite resistance protein TehB SMU.1646c 1568529 - 1567891 - | hemolysis inducing protein SMU.1647c 1568797 - 1568519 - | putative transcriptional regulator SMU.1648c 1569161 - 1568916 - | hypothetical protein TERM 1714 1569890 - 1569874 - g 81 -6.6 -4.96646 | overlap 1569889 TTAGATAAGCAAAAA CCTGTT CTGGC AACAGG CGACTATAATGTTGC exoA 1569394 - 1570221 + | putative exodeoxyribonuclease III TERM 1715 1570230 - 1570262 + T 89 -8.6 -4.66002 | gap 1, opp_overlap 1570229 1570228 1570230 TTTATAAACAAAAGT CCTCTGCAAGTGA AAATTAAC TCACT-GCAGAGG TTATTTTTATTGGTA TERM 1716 1570262 - 1570230 - T 72 -9.3 -2.74499 | gap 1, opp_overlap 1570230, overlap 1570229 1570228 TTTATAAACAAAAGT CCTCTGCAAGTGAA AATTAA CTCACT-GCAGAGG TTATTTTTATTGGTA end3 1570909 - 1570286 - | putative endonuclease III (DNA repair) TERM 1717 1570986 - 1570966 - R 100 -9.1 -5.74086 | opp_overlap 1570964 1570966 AAAGGAAAGAAAAAA TCTCGACTT TAA AAGTCAAGA TCTTCGTAGGCTGTT TERM 1718 1570993 - 1571011 + r 75 -8.2 -3.7229 | AAGTCAAGATCTTCG TAGGCTGT TCG ATAGCCTA TTTGCACTATTTTAT SMU.1651 1571327 - 1570974 - | putative arsenate reductase TERM 1719 1571087 - 1571111 + g 78 -7.3 -4.48449 | overlap 1571105 CTAATAAATTCGCTG CTTCATCAA GACTTAG TTGATGAAG TTTATCTTTTAATCC ogt 1571858 - 1571364 - | putative methylated-DNA--protein-cysteine S-methyltransferase TERM 1720 1571831 - 1571818 - G 73 -6.7 -4.28067 | overlap 1571810 GCAACAAGAGATAAA TCTCC CAAA GGAGA ATGATAAATCTGCTT serA 1573128 - 1571947 - | putative D-3-phosphoglycerate dehydrogenase TERM 1721 1572863 - 1572843 - G 70 -4.7 -4.61482 | opp_overlap 1572845, overlap 1572845 GCGCTGAAAAAAGAA GAGAAGCAA TTA CTGCTTCTT TGACAGCATTGGCAT TERM 1722 1572861 - 1572845 - G 72 -7.3 -3.91465 | opp_overlap 1572845, overlap 1572843 GCTGAAAAAAGAAGA GAAGCAA TTA CTGCTTC TTTGACAGCATTGGC SMU.1654c 1573726 - 1573214 - | putative acetyltransferase SMU.1655c 1574059 - 1573919 - | hypothetical protein serC 1575268 - 1574177 - | phosphoserine aminotransferase TERM 1723 1575249 - 1575235 - G 75 -10 -3.01712 | CTGGTTTTGGCAAGA CTGCAG GAC CTGCAG AAAAATTATAAATTG SMU.1657c 1575829 - 1575488 - | putative nitrogen regulatory protein PII nrgA 1577080 - 1575845 - | putative ammonium transporter, NrgA protein TERM 1724 1577100 - 1577120 + r 82 -8.5 -4.08216 | opp_overlap 1577119 ATCAGCACCTCCCTT TATGTTATA TAA TATAACATA TTTTCAGGAAAATAA TERM 1725 1577385 - 1577370 - R 100 -7.6 -5.65927 | opp_overlap 1577370 1577372 TACTCAAAGAAAAAA GACAGT CGAA ACTGTC TACTGTAATTCATGA SMU.1659c 1578251 - 1577385 - | hypothetical protein TERM 1726 1577668 - 1577703 + g 100 -13.6 -4.44974 | opp_overlap 1577672, overlap 1577670 GTCAATTCTCTGGTC AATACTATCTGTCTAT CACC ATAGACAGATAGTATA TTTTCTAAAGTTTCC TERM 1727 1577670 - 1577701 + g 100 -16.2 -3.82551 | opp_overlap 1577672, overlap 1577668 CAATTCTCTGGTCAA TACTATCTGTCTAT CACC ATAGACAGATAGTA TATTTTCTAAAGTTT TERM 1728 1577699 - 1577672 - G 95 -14.4 -3.01791 | opp_overlap 1577670 1577668 ATTCTCTGGTCAATA CTATCTGTCTAT CACC ATAGACAGATAG TATATTTTCTAAAGT SMU.1660c 1578589 - 1578257 - | DNA replication intiation control protein YabA TERM 1729 1578431 - 1578449 + g 70 -7.5 -3.68359 | opp_overlap 1578430 CATCTGGCTAAAATG GCTAAGA CGGTC TCTTAGC TTATCATTTTCCAAA SMU.1661c 1579388 - 1578582 - | putative signal peptidase II holB 1580260 - 1579385 - | DNA polymerase III subunit delta' TERM 1730 1580136 - 1580124 - G 74 -5.5 -4.84359 | overlap 1580125 GGACTGTCACAAAAA CGGCT CTG AGCCA ACAAAACAGCCATTT tdk 1580911 - 1580273 - | thymidylate kinase TERM 1731 1580985 - 1580964 - R 100 -7.9 -5.69023 | overlap 1580968 1580976 AAAATATGAAAAAAA GGCACTGCC AAAT GGCAGAACC AATTAAAAATCAGTC TERM 1732 1580981 - 1580968 - R 70 -8.1 -3.00863 | overlap 1580964 1580976 TATGAAAAAAAGGCA CTGCC AAAT GGCAG AACCAATTAAAAATC SMU.1664c 1581647 - 1580988 - | putative acetoin utilization protein, acetoin dehydrogenase livF 1582473 - 1581763 - | putative branched chain amino acid ABC transporter, ATP-binding protein livG 1583237 - 1582473 - | putative branched chain amino acid ABC transporter, ATP-binding protein livM 1584193 - 1583237 - | putative branched chain amino acid ABC transporter, permease protein livH 1585066 - 1584197 - | putative branched chain amino acid ABC transporter, permease protein TERM 1733 1585096 - 1585127 + r 74 -7.5 -3.91984 | gap 1, opp_overlap 1585096 1585099 1585101, overlap 1585099 1585101 CTTTCTATAAATAAA T-AATATCTGGGGA TACGT TCCCCAGATGTTCA TTGTTTCAGACCTAT TERM 1734 1585126 - 1585096 - R 79 -6.9 -4.55295 | opp_overlap 1585096 1585099 1585101, overlap 1585099 1585101 CTTTCTATAAATAAA TAATATCTGGGGA TACGT TCCCCAGATGTTC ATTGTTTCAGACCTA TERM 1735 1585099 - 1585123 + r 89 -10.8 -3.61652 | opp_overlap 1585096 1585099 1585101, overlap 1585096 1585101 TCTATAAATAAATAA TATCTGGGGA TACGT TCCCCAGATG TTCATTGTTTCAGAC TERM 1736 1585123 - 1585099 - R 88 -8.6 -4.38748 | opp_overlap 1585099 1585096 1585101, overlap 1585096 1585101 TCTATAAATAAATAA TATCTGGGGA TACGT TCCCCAGATG TTCATTGTTTCAGAC TERM 1737 1585101 - 1585121 + r 87 -11.2 -3.38135 | opp_overlap 1585099 1585096 1585101, overlap 1585099 1585096 TATAAATAAATAATA TCTGGGGA TACGT TCCCCAGA TGTTCATTGTTTCAG TERM 1738 1585121 - 1585101 - R 90 -11.2 -3.78321 | opp_overlap 1585101 1585099 1585096, overlap 1585099 1585096 TATAAATAAATAATA TCTGGGGA TACGT TCCCCAGA TGTTCATTGTTTCAG livK 1586322 - 1585150 - | putative ABC transporter, branched chain amino acid-binding protein SMU.1670c 1586673 - 1586425 - | hypothetical protein SMU.1671c 1587120 - 1586680 - | hypothetical protein TERM 1739 1587226 - 1587206 - R 83 -6.9 -4.75174 | opp_overlap 1587206 TACTCAACTTAAAAA GCTAAGTCA TTA TAACTCAGC TTTTCCTACTTATTT clpP 1587826 - 1587236 - | ATP-dependent Clp protease proteolytic subunit TERM 1740 1588340 - 1588360 + r 100 -12.7 -4.36914 | opp_overlap 1588340 1588343 TTCAGGCTCGGGAAA TAACAGTCC ACT GGACTGTTA TTTTGTGCCAAACAA TERM 1741 1588360 - 1588340 - R 100 -12.7 -3.53811 | opp_overlap 1588340, overlap 1588343 TTCAGGCTCGGGAAA TAACAGTCC ACT GGACTGTTA TTTTGTGCCAAACAA TERM 1742 1588357 - 1588343 - R 87 -10 -3.90922 | opp_overlap 1588340, overlap 1588340 AGGCTCGGGAAATAA CAGTCC ACT GGACTG TTATTTTGTGCCAAA upp 1588987 - 1588358 - | uracil phosphoribosyltransferase metC 1590463 - 1589300 - | putative aminotransferase; beta-cystathionase TERM 1743 1589873 - 1589853 - G 79 -9.1 -3.88464 | overlap 1589863 CCAAAAAGAGCCAAA TCCTGATGA ATT TCATCAGAA ACTAAAATCACACCA metB 1591572 - 1590478 - | cystathionine gamma-synthase TERM 1744 1591791 - 1591770 - R 93 -9.5 -4.68593 | opp_overlap 1591787 GCGAGGATCCAAAAA TCCCAATGA AAAA CCATTGGGA CAGCTCATTAATTCA SMU.1676c 1593412 - 1591799 - | hypothetical protein TERM 1745 1594513 - 1594491 - g 84 -7.7 -4.71061 | ACTGATATTCAAAAA GGCATCGTT CAAAC AACGGTGCC GGGGCGCATGGAAGT murE 1593522 - 1594973 + | UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase TERM 1746 1595988 - 1595969 - g 71 -3.6 -4.89567 | GTTGAAAAGACAAAA GCAAATAT TCTC ATTTTTGC CGGAGAAAATGATAG SMU.1678 1595207 - 1596226 + | acyl-CoA thioesterase TERM 1747 1596417 - 1596440 + T 100 -10.4 -5.06414 | overlap 1596404 TATCATACCATCATT GGTCTGGAAT TTTG ATTCCAGATC TTTTTATTGCCAAAA SMU.1679c 1596913 - 1596404 - | hypothetical protein SMU.1680c 1597559 - 1596939 - | hypothetical protein TERM 1748 1597031 - 1597045 + g 79 -5 -5.3104 | opp_overlap 1597031 CAGCTTGCCAAAGAA TGGAAG CGA CTTTCA TTTTATTTTTAATCC SMU.1681c 1597934 - 1597560 - | hypothetical protein SMU.1682c 1598570 - 1597995 - | intracellular protease TERM 1749 1598638 - 1598619 - R 77 -4.3 -5.1925 | opp_overlap 1598619 1598621, overlap 1598611 1598610 GTATAACCTAAAAAA GATGACA GCTTTA TGTCACC TTTTATAGAATGATT SMU.1683c 1599557 - 1598634 - | hypothetical protein SMU.1685c 1600265 - 1599615 - | hypothetical protein TERM 1750 1600456 - 1600441 - R 81 -3.2 -5.72622 | TTTACAAAGAAAAAA GACAGC TCTC ACCGTC TTTCATTTAAATTTT ppaC 1601404 - 1600472 - | putative manganese-dependent inorganic pyrophosphatase dltD 1602731 - 1601466 - | putative extramembranal protein, DltD protein TERM 1751 1601939 - 1601950 + g 70 -3 -5.11112 | overlap 1601932 AATGATCATTAATTT CAAA TTGA TTTG TTTTTGTTAACCTTT TERM 1752 1602433 - 1602403 - G 73 -6.9 -4.19746 | TGCATGCCAAAATAA TGTGACAAAGAGG TTGAC CCTTTTTGTCCCA GTAAATAGGGACGAT TERM 1753 1602707 - 1602683 - G 74 -5 -4.9251 | gap 1, overlap 1602684 1602686 AAGAAAAAACCAAAA CTAGGGCACAG AAAA CTG-GCCCCAA AATCAACCATAACCG dltC 1602963 - 1602724 - | D-alanine--poly(phosphoribitol) ligase subunit 2 dltB 1604240 - 1602978 - | hypothetical protein dltA 1605787 - 1604237 - | D-alanine--D-alanyl carrier protein ligase TERM 1754 1606193 - 1606158 - R 100 -7.8 -5.63236 | gap 1, opp_overlap 1606158 ATTTAAAAAGAAAAA GCTTGAAA-TAGCTCTT TCT AAAAGCAACTTTCAAGC TTTTTCTTAGATTTG TERM 1755 1606158 - 1606193 + r 80 -5.6 -5.16151 | gap 1, opp_overlap 1606158 ATTTAAAAAGAAAAA GCTTGAAA-TAGCTCTT TCT AAAAGCAACTTTCAAGC TTTTTCTTAGATTTG pflA 1607396 - 1606605 - | pyruvate-formate lyase activating enzyme TERM 1756 1607457 - 1607476 + r 70 -4.4 -4.90136 | gap 1, opp_overlap 1607449 1607457 TTTAAAAGTAAAAAA GACTA-ACA TTA TGTTTAGTC TTTTTCATCTTCCTT TERM 1757 1607476 - 1607457 - R 81 -4.4 -5.46698 | gap 1, opp_overlap 1607457, overlap 1607449 TTTAAAAGTAAAAAA GACTA-ACA TTA TGTTTAGTC TTTTTCATCTTCCTT hlyX 1608808 - 1607471 - | putative hemolysin SMU.1694c 1609938 - 1608844 - | putative permease SMU.1695 1610015 - 1610797 + | molybdenum ABC transporter ATP-binding protein TERM 1758 1610901 - 1610865 - T 80 -5.5 -5.1287 | gap 1, opp_overlap 1610865 GTGATATCTAAAAAA GCTTAAAACTAA-GTT GTCAGA AACGTTAATTTTAAGC TTTTTTATATCGCTT TERM 1759 1610865 - 1610901 + T 76 -3.3 -5.38951 | gap 1, opp_overlap 1610865 GTGATATCTAAAAAA GCTTAAAACTAA-GTT GTCAGA AACGTTAATTTTAAGC TTTTTTATATCGCTT SMU.1697c 1611476 - 1610931 - | hypothetical protein TERM 1760 1611250 - 1611273 + g 76 -5.3 -4.946 | TTATTAATAGTTTGA TGTCCATCT AAAATG AGTTGGACA TTTTTAATATTTAAT TERM 1761 1611387 - 1611374 - G 79 -2.3 -5.626 | GATGGGACAAAAAAA CGGTA TCAT TTCCG TTGCCCATAGTCGCA SMU.1699c 1612405 - 1611473 - | hypothetical protein SMU.1700c 1613205 - 1612510 - | LrgB family protein TERM 1762 1613155 - 1613139 - G 77 -5.9 -4.77757 | overlap 1613141 GCCTAAAAATCAAAA TACCTAT CAA ATAGGCA AATATAGACAGCCAA SMU.1701c 1613543 - 1613202 - | hypothetical protein TERM 1763 1613662 - 1613642 - R 100 -8.4 -5.45802 | TTTTTAAAACAAAAA TGGAAATC ATATA GATTTCCA AATTAGATGCCAAAT SMU.1702c 1614380 - 1613730 - | putative phosphatase TERM 1764 1613843 - 1613831 - G 75 -7.7 -4.08767 | GCCAGCCTCCTAAAA CATCC GTT GGATG GTGGACACCGATATA SMU.1703c 1614996 - 1614370 - | hypothetical protein TERM 1765 1614859 - 1614848 - G 75 -4.4 -5.055 | TCAAGTTTCAAAAAA TCCA CGCC TGGA ATAATTGGAAAGTTA TERM 1766 1614977 - 1614950 - G 85 -5 -5.60993 | TTTTTCATAAAAAAA TTCCTCCAATTT TTAC AAATCGAAAGAA GGCCTAAAGAGTGTA SMU.1704 1615455 - 1615781 + | hypothetical protein SMU.1705 1615768 - 1616364 + | hypothetical protein SMU.1706 1616361 - 1617188 + | hypothetical protein TERM 1767 1617294 - 1617259 - T 100 -12.8 -5.36441 | opp_overlap 1617259 TTGGTATATAAAAAA CGTTTGAGACACTATT CAAA AAGAGTATCTCAAACG TTTTTCTGATAGTCA TERM 1768 1617259 - 1617294 + T 100 -10.6 -4.93296 | opp_overlap 1617259 TTGGTATATAAAAAA CGTTTGAGACACTATT CAAA AAGAGTATCTCAAACG TTTTTCTGATAGTCA SMU.1707c 1617915 - 1617367 - | putative rRNA methylase TERM 1769 1617968 - 1617948 - H 87 -5.3 -5.626 | TACTTTACAAAAAAA GAACCACGG AAC CCGGAGTCC AGCTCAGCAGGTAAC TERM 1770 1619009 - 1619033 + G 86 -8.7 -4.64676 | overlap 1619010 TCGTAACAGGCAAGC GTATGGAAATG ATT CATTTCCATAA TTTTGTTAAAAATAA TERM 1771 1619010 - 1619032 + G 90 -12.2 -3.38324 | overlap 1619009 CGTAACAGGCAAGCG TATGGAAATG ATT CATTTCCATA ATTTTGTTAAAAATA trkA 1618381 - 1619736 + | potassium transporter peripheral membrane component TERM 1772 1619867 - 1619881 + G 75 -6.4 -4.46404 | overlap 1619869 TCATCTTTAGCATTT TGGCCA CTA TGGCTA TTTTAATCTTGCTTG TERM 1773 1620924 - 1620910 - g 76 -8.6 -3.75581 | overlap 1620908 CTGGATAAAAGAACA CAACAC AGT GTGTTG AAATATTTAGCTATC TERM 1774 1621010 - 1621025 + G 71 -6.8 -4.14472 | opp_overlap 1621010 TTATGATTGTAACCA GCGCTG CTGC CAGTGC TTTTAACAATATTGG trkH 1619743 - 1621182 + | putative potassium uptake protein TrkH TERM 1775 1621206 - 1621251 + T 71 -8.6 -2.90992 | gap 1, opp_overlap 1621211, overlap 1621211 TATCAATTAACATAA AAAAAGCCTCCAAA-GTTATT AAGAA ATTAACTTTTGGAGGCTTTTA TGATTTAGACGGCTT TERM 1776 1621246 - 1621211 - T 100 -8.5 -5.82172 | gap 1, opp_overlap 1621206 1621211 ATTAACATAAAAAAA GCCTCCAAA-GTTATT AAGAA ATTAACTTTTGGAGGC TTTTATGATTTAGAC TERM 1777 1621211 - 1621246 + T 89 -8.5 -4.61566 | gap 1, opp_overlap 1621211, overlap 1621206 ATTAACATAAAAAAA GCCTCCAAA-GTTATT AAGAA ATTAACTTTTGGAGGC TTTTATGATTTAGAC SMU.1710c 1621503 - 1621249 - | hypothetical protein rluB 1622225 - 1621503 - | putative pseudouridylate synthase B, large subunit scpB 1622811 - 1622215 - | segregation and condensation protein B scpA 1623515 - 1622808 - | segregation and condensation protein A xerD 1624252 - 1623515 - | site-specific tyrosine recombinase XerD-like protein SMU.1715c 1624710 - 1624249 - | hypothetical protein SMU.1716c 1625225 - 1624707 - | hypothetical protein SMU.1717c 1626184 - 1625207 - | fused deoxyribonucleotide triphosphate pyrophosphatase/unknown domain-containing protein TERM 1778 1626158 - 1626171 + g 85 -2.5 -5.68438 | CCAGTTATGATCATC TTTAT ATTC ATAAA TTTTTTCTTTCATAA murI 1626975 - 1626181 - | glutamate racemase TERM 1779 1627018 - 1626995 - R 79 -8.2 -4.07687 | opp_overlap 1626998 1627000, overlap 1626998 ATCTTCTTTCTAAAA TAAGACTAGG AAAA CCCAGTCTCA TCTAAAAGATTATTT TERM 1780 1627015 - 1626998 - R 80 -7.7 -4.17048 | opp_overlap 1626998 1627000, overlap 1626995 TTCTTTCTAAAATAA GACTAGG AAAA CCCAGTC TCATCTAAAAGATTA SMU.1719c 1627276 - 1627028 - | hypothetical protein SMU.1721c 1628899 - 1627649 - | putative diaminopimelate decarboxylase TERM 1781 1628150 - 1628133 - G 70 -7.1 -3.83437 | overlap 1628131 TTAGGAACTAAAATA TCATCAA ATTT TTGATGA ACACCCTCTCCAATA TERM 1782 1628960 - 1628944 - R 93 -6.6 -5.34555 | TTATACCATAAAAAA GAGTGA AACCA TCACTC TAGAAAATCCCTACA TERM 1783 1629074 - 1629024 - R 82 -4.9 -5.38951 | gap 1 AACCGATACAAAAAA TAGGAAGCACTCAGCAAGCCATTA TTAA TATTAGACT-CTGAGTTCTTCCTA TACTCCTATATTTTT SMU.1722c 1629777 - 1629088 - | putative integral membrane protein SMU.1723c 1630300 - 1629797 - | hypothetical protein TERM 1784 1630381 - 1630352 - R 93 -8.7 -4.788 | opp_overlap 1630362 1630363, overlap 1630356 AAATTAAGCTAAAAA TAAATATAGCTGC AGCA GCTGCTACATTTA AGCTTTCTGCTCTTC TERM 1785 1630377 - 1630356 - R 72 -5.1 -4.91473 | opp_overlap 1630362 1630363, overlap 1630352 TAAGCTAAAAATAAA TATAGCTGC AGCA GCTGCTACA TTTAAGCTTTCTGCT SMU.1724c 1631075 - 1630335 - | putative rRNA methylase TERM 1786 1630702 - 1630685 - G 76 -5.5 -4.96848 | overlap 1630687 TTTCTGACACAAAAA CAGCATC AAAA GCTGCTG CATCTGCTGTCCGAA SMU.1725 1631108 - 1631386 + | putative acylphosphatase SMU.1727 1631478 - 1632410 + | OxaA-like protein precursor TERM 1787 1632728 - 1632674 - T 84 -11.2 -3.05597 | gap 1, opp_overlap 1632685, overlap 1632685 TTGATTGTTGAAAAG CAT-CAAAAAAACCTATTCCTAG TCATTTAATT CTAGGAATAGGTTTTTTAGAATG GAGAGAAACTAGATG TERM 1788 1632716 - 1632685 - T 100 -8.9 -5.5943 | opp_overlap 1632685, overlap 1632674 AAAGCATCAAAAAAA CCTATTCCTAG TCATTTAATT CTAGGAATAGG TTTTTTAGAATGGAG TERM 1789 1632685 - 1632716 + T 95 -8.9 -5.0538 | opp_overlap 1632685 1632674 AAAGCATCAAAAAAA CCTATTCCTAG TCATTTAATT CTAGGAATAGG TTTTTTAGAATGGAG TERM 1790 1632809 - 1632827 + T 75 -4.7 -4.98672 | opp_overlap 1632793, overlap 1632793 TAGAAGCTATGGTTC TAATAAG TTCTT CTTATTA TTTTGTCTTTTTCAC greA 1633307 - 1632825 - | transcription elongation factor GreA TERM 1791 1633343 - 1633367 + r 100 -16.5 -3.91084 | opp_overlap 1633343 1633346, overlap 1633346 TTATTTAGACATGAA GAGGCTGGGAC AAA GTCCCAGCTTC TTTAGTTACAAGTAA TERM 1792 1633367 - 1633343 - R 100 -14.3 -3.32993 | opp_overlap 1633343 1633346, overlap 1633346 TTATTTAGACATGAA GAGGCTGGGAC AAA GTCCCAGCTTC TTTAGTTACAAGTAA TERM 1793 1633346 - 1633364 + r 100 -14.6 -4.0825 | opp_overlap 1633343 1633346, overlap 1633343 TTTAGACATGAAGAG GCTGGGAC AAA GTCCCAGC TTCTTTAGTTACAAG TERM 1794 1633364 - 1633346 - R 100 -14.6 -2.53345 | opp_overlap 1633346 1633343, overlap 1633343 TTTAGACATGAAGAG GCTGGGAC AAA GTCCCAGC TTCTTTAGTTACAAG SMU.1729c 1635287 - 1633443 - | putative aminodeoxychorismate lyase (fragment) TERM 1795 1634926 - 1634903 - G 79 -8.3 -4.14392 | opp_overlap 1634903 CTTTAACTTCCAAAA CATCAGAAA CTTTGT TTTCTGATG TTTTTTTATTAGGAA TERM 1796 1634903 - 1634926 + g 100 -8.3 -5.7946 | opp_overlap 1634903 CTTTAACTTCCAAAA CATCAGAAA CTTTGT TTTCTGATG TTTTTTTATTAGGAA SMU.1730c 1635952 - 1635461 - | putative acetyltransferase TERM 1797 1635999 - 1635978 - R 83 -4.5 -5.60993 | opp_overlap 1635978, overlap 1635979 TCCTTTAGAAAAAAA GTCTTTACT AAAA AGTAAAGAG ATCTTTTATCTTGTA TERM 1798 1635998 - 1635979 - R 77 -8 -3.95873 | opp_overlap 1635978, overlap 1635978 CCTTTAGAAAAAAAG TCTTTACT AAAA AGTAAAGA GATCTTTTATCTTGT murC 1637336 - 1636005 - | UDP-N-acetylmuramate--L-alanine ligase SMU.1732c 1637943 - 1637353 - | hypothetical protein TERM 1799 1637772 - 1637796 + g 70 -8.7 -3.19936 | CTTTCTGAGGATTAG GATTATCAGGT ATA AACTGATAATC TTGAGTTACGTCGTT TERM 1800 1638012 - 1638028 + r 70 -3.8 -5.10665 | opp_overlap 1638012, overlap 1638020 AAAAGGTATCATGAA GAAATT CCTAA AATTTC TTTTATTTCTTCAAT SMU.1733c 1641097 - 1638005 - | putative SNF helicase TERM 1801 1639262 - 1639237 - G 70 -2.5 -5.04249 | TTGTTAAAAAAGAAA GGGTCTGCAAA GTTT TCCCCAAACCC ATATCATCAGCCAAA TERM 1802 1639873 - 1639889 + g 75 -2.3 -5.42198 | opp_overlap 1639876, overlap 1639876 AGCCATACTGTTTCA AAAGATT AGC AATCTTC TTTTCTTTTTTAAAA TERM 1803 1640281 - 1640232 - G 79 -9.1 -3.89956 | gap 1, opp_overlap 1640232 1640231 1640234 1640246, overlap 1640234 1640235 1640275 1640280 TTATGATAGAGTAAA TAG-TGATTATCAAAGAAAAAA GTTGCTG TTTTTTCTTTGATAATCAACTC AATTGATTGACGATG TERM 1804 1640278 - 1640234 - G 90 -11.9 -3.53419 | opp_overlap 1640232 1640231 1640234 1640246, overlap 1640232 1640235 1640275 ATGATAGAGTAAATA GTGATTATCAAAGAAAAAA GTTGCTG TTTTTTCTTTGATAATCAA CTCAATTGATTGACG TERM 1805 1640234 - 1640279 + g 81 -11.7 -2.60244 | gap 1, opp_overlap 1640234 1640232 1640235 1640275, overlap 1640232 1640231 1640246 ATGATAGAGTAAATA G-TGATTATCAAAGAAAAAA GTTGCTG TTTTTTCTTTGATAATCAAC TCAATTGATTGACGA TERM 1806 1640277 - 1640235 - G 100 -15.4 -2.71329 | opp_overlap 1640234 1640232 1640231 1640246, overlap 1640234 1640232 1640275 TGATAGAGTAAATAG TGATTATCAAAGAAAAAA GTTGCTG TTTTTTCTTTGATAATCA ACTCAATTGATTGAC TERM 1807 1640794 - 1640806 + g 73 -4.1 -5.09762 | overlap 1640787 GGAAGAGGCTGCCAA GGGAA GTT TTCTC TTTTCTTTCTTCAAG TERM 1808 1641205 - 1641188 - R 77 -4.1 -5.44837 | AAAAAAATAGAAAAA TCCCACC TAAA GATGAGA TTAATTTTTAATACT TERM 1809 1641229 - 1641239 + r 71 -5.4 -4.62783 | opp_overlap 1641229 TAATACTTTCTAAAA CGTT GGT AACG TTTTTCAAGTAAATC accA 1641983 - 1641213 - | acetyl-CoA carboxylase subunit alpha accD 1642846 - 1641980 - | acetyl-CoA carboxylase subunit beta accC 1644225 - 1642855 - | acetyl-CoA carboxylase biotin carboxylase subunit TERM 1810 1643988 - 1643978 - G 71 -3.2 -5.08824 | TTTTCACTTAAAAAA CCAA AAC CTGG ATGAATAGCTTCAGC fabZ 1644814 - 1644392 - | (3R)-hydroxymyristoyl-ACP dehydratase TERM 1811 1644508 - 1644532 + g 100 -7.9 -5.22039 | opp_overlap 1644508 1644511 ACTTAGCCGTCATAA CAAGTTGATCT CCA GGAACAACTTG TTTTTTAAATTTCAC bccP 1645299 - 1644811 - | acetyl-CoA carboxylase biotin carboxyl carrier protein subunit fabF 1646534 - 1645302 - | 3-oxoacyl-(acyl carrier protein) synthase II fabG 1647317 - 1646583 - | 3-ketoacyl-(acyl-carrier-protein) reductase fabD 1648252 - 1647332 - | acyl-carrier-protein S-malonyltransferase TERM 1812 1647877 - 1647891 + g 70 -7.8 -3.68619 | CCATTTTCCCCACTC CAGCGG GTG CTGCTG TTTCCATAAATTCAC TERM 1813 1648005 - 1648015 + g 81 -5.4 -5.27335 | overlap 1647990 CCAGCAACAATGTCT GGTT GAT AACC TTTTTCTTTCAAAAG TERM 1814 1648225 - 1648242 + g 70 -2.7 -5.03945 | TTTGAGCTCCTTGGC CAGCA AATAAAAA TGCTG TTTTTGTCATTATTA SMU.1742c 1649220 - 1648255 - | putative trans-2-enoyl-ACP reductase TERM 1815 1649310 - 1649289 - R 79 -6.7 -4.69324 | opp_overlap 1649294 ATAATAAAGAAGAAA GAATATTCT TACA AGAATACTC TCAAAATACTACTTA TERM 1816 1649312 - 1649330 + r 82 -4.7 -5.4505 | TTACAAGAATACTCT CAAAATA CTACT TATTTTG TTTTTTCTTCAACAA acpP 1649547 - 1649323 - | acyl carrier protein fabH 1650584 - 1649607 - | 3-oxoacyl-(acyl carrier protein) synthase III TERM 1817 1650376 - 1650389 + g 81 -4.5 -5.43866 | AAATCAATCTCTTTC GCCTT TAAT GAGGC TTTTTTTAAAAGTTC SMU.1745c 1651018 - 1650584 - | putative transcriptional regulator TERM 1818 1650866 - 1650878 + g 73 -4.1 -5.06451 | AGCAATATCACTCGG TGTCA CAT TGGCA TTTTTTCCAATAATA TERM 1819 1651063 - 1651041 - R 93 -10.8 -4.12532 | opp_overlap 1651045, overlap 1651045 CCTCCCACACATAAA TAAACTTTGA CTA TCAAAGTTTA TCAAAAGATGACCCA TERM 1820 1651059 - 1651045 - R 80 -7.2 -4.65722 | opp_overlap 1651045, overlap 1651041 CCACACATAAATAAA CTTTGA CTA TCAAAG TTTATCAAAAGATGA TERM 1821 1651045 - 1651059 + r 72 -7.2 -3.86346 | opp_overlap 1651045 1651041 CCACACATAAATAAA CTTTGA CTA TCAAAG TTTATCAAAAGATGA TERM 1822 1651312 - 1651290 - R 84 -6.3 -5.19328 | gap 1, opp_overlap 1651290 ACTGCACAATAAAAA GGC-GGAACA TTTT TGTCCCAGCC TATACTTACACTTTT SMU.1746c 1652138 - 1651347 - | enoyl-CoA hydratase TERM 1823 1651801 - 1651770 - G 72 -5.3 -4.66938 | gap 1, opp_overlap 1651774, overlap 1651772 1651792 ACTGGCAATACAAAA GT-CTGCAGCTA CCGCTATAT TAGCTGCAGCAC CTGCAACTGCACCAT SMU.1747c 1652944 - 1652300 - | putative phosphatase TERM 1824 1652905 - 1652889 - G 76 -3.7 -5.18726 | CTTCGATAATAAAAA CCTTCTG TAT CAAAAAG AACACCATCCATATC akh 1653043 - 1654401 + | aspartate kinase TERM 1825 1654705 - 1654688 - T 85 -4.9 -5.63374 | TGAATACCAAAAAAA GAAGATT AAGC AATCCTC TCTAAATGTCAGTAT TERM 1826 1658476 - 1658491 + T 77 -7.6 -3.98114 | overlap 1658469 CTTACTCTCTCTGGC GACTCT TCCC AGAGTC TTCTTCTATTCCCTT TERM 1827 1658533 - 1658552 + T 95 -12.2 -3.62275 | opp_overlap 1658532 1658531 CGCAGTCCTACAACC CCAGAGTG TAAA CACTCTGG TTTGCCCTCCTGCCT TERM 1828 1658869 - 1658891 + T 95 -10.6 -4.30809 | overlap 1658870 GGTTTCTTTTTTGTT TCCCTATAGC TGC GCTATAGGGC TTTTACTAGCTATTC TERM 1829 1658870 - 1658890 + T 100 -14.1 -3.17762 | overlap 1658869 GTTTCTTTTTTGTTT CCCTATAGC TGC GCTATAGGG CTTTTACTAGCTATT SMU.1750c 1661680 - 1661570 - | hypothetical protein SMU.1752c 1662154 - 1661984 - | hypothetical protein TERM 1830 1662282 - 1662264 - R 87 -11.7 -2.55074 | opp_overlap 1662277 TTCAATTTCAATCCA CGCACCC GTGAA GGGTGCG ACGGCGCGTAGTTGC SMU.1753c 1662725 - 1662432 - | hypothetical protein SMU.1754c 1663131 - 1662736 - | hypothetical protein SMU.1755c 1663506 - 1663207 - | hypothetical protein SMU.1757c 1663759 - 1663475 - | hypothetical protein SMU.1758c 1664400 - 1663756 - | hypothetical protein TERM 1831 1664235 - 1664257 + g 76 -7 -4.22652 | AAACATGCATGGCCC GCGAAGTGAT AAT ATCCTTTCGC TTTTCCCTAATATAA SMU.1760c 1665304 - 1664429 - | hypothetical protein SMU.1761c 1666717 - 1665308 - | hypothetical protein SMU.1762c 1667240 - 1666677 - | hypothetical protein TERM 1832 1666881 - 1666893 + gr 73 -7.7 -3.60587 | overlap 1666884 TTTATTATTTTCAGT CTGGA TAA TCCAG TTATCTAAATTTTGT SMU.1763c 1667989 - 1667240 - | hypothetical protein SMU.1764c 1670492 - 1668084 - | hypothetical protein TERM 1833 1669780 - 1669798 + g 81 -3.2 -5.54885 | TCAATAGCTTCCAGA TAAGAC CTATTTA GTCTTA TTTTTTCTTCCTGTT TERM 1834 1670667 - 1670705 + r 73 -8.4 -3.54741 | opp_overlap 1670669, overlap 1670668 1670671 1670678 TTATTTTCATAAAAA AATAGATAAAAGTACATA AAA TATGTGCTTTTATCTAAA TTTCAAAAGATAATC TERM 1835 1670668 - 1670704 + r 87 -11.9 -2.7263 | opp_overlap 1670669, overlap 1670667 1670671 1670678 TATTTTCATAAAAAA ATAGATAAAAGTACATA AAA TATGTGCTTTTATCTAA ATTTCAAAAGATAAT TERM 1836 1670703 - 1670669 - R 100 -13.2 -5.61596 | opp_overlap 1670668 1670667 1670671 1670678 ATTTTCATAAAAAAA TAGATAAAAGTACATA AAA TATGTGCTTTTATCTA AATTTCAAAAGATAA TERM 1837 1670671 - 1670701 + r 100 -13.6 -2.64274 | opp_overlap 1670669, overlap 1670668 1670667 1670678 TTTCATAAAAAAATA GATAAAAGTACATA AAA TATGTGCTTTTATC TAAATTTCAAAAGAT TERM 1838 1670678 - 1670694 + r 74 -5.9 -4.59081 | opp_overlap 1670669, overlap 1670671 1670668 1670667 AAAAAATAGATAAAA GTACATA AAA TATGTGC TTTTATCTAAATTTC SMU.1765c 1671711 - 1670737 - | hypothetical protein TERM 1839 1671913 - 1671888 - R 100 -10.5 -5.27779 | CTTAATATCAAAAAA CAAGCCCAACC ATGC GGTTAGACTTG TTGAGAAGATTTACT SMU.1766c 1672159 - 1672007 - | hypothetical protein SMU.1767c 1672407 - 1672216 - | hypothetical protein SMU.1768c 1672696 - 1672391 - | hypothetical protein valS 1675918 - 1673267 - | valyl-tRNA synthetase TERM 1840 1674885 - 1674903 + g 70 -7.4 -3.78026 | overlap 1674882 CCTGTCCGTTCTGAG TGACCAAC CGA GTGGGTCA TCTTTTCGATTTCCA SMU.1771c 1676238 - 1675930 - | hypothetical protein SMU.1772c 1676620 - 1676210 - | hypothetical protein SMU.1773c 1677548 - 1676613 - | hypothetical protein TERM 1841 1676824 - 1676836 + g 91 -3.5 -5.95286 | TTTAATATATCTTTG TTATT CTC AATAA TTTTTTGTTTTTGCT TERM 1842 1677648 - 1677623 - R 100 -13.3 -4.72272 | opp_overlap 1677622 1677647, overlap 1677624 CTTTCCTACCAAAAA CCGTCCCTGCC AATT GACAGGGACGA ATGTCATTCTATGAT TERM 1843 1677647 - 1677624 - R 100 -14.6 -3.43042 | opp_overlap 1677622, overlap 1677623 TTTCCTACCAAAAAC CGTCCCTGCC AATT GACAGGGACG AATGTCATTCTATGA SMU.1774c 1678095 - 1677838 - | hypothetical protein TERM 1844 1678327 - 1678352 + r 100 -10.5 -5.03747 | opp_overlap 1678324, overlap 1678328 1678350 GTGGCATGAAACTTG ACCGACCTAAT TCCT ATTAGGTCGGC TTTTTTAGAGCCTTT TERM 1845 1678328 - 1678351 + r 100 -14 -3.61164 | opp_overlap 1678324, overlap 1678327 1678350 TGGCATGAAACTTGA CCGACCTAAT TCCT ATTAGGTCGG CTTTTTTAGAGCCTT TERM 1846 1678350 - 1678364 + r 76 -6.4 -4.59773 | opp_overlap 1678324, overlap 1678328 1678327 AATTCCTATTAGGTC GGCTTT TTT AGAGCC TTTTTAACAATGGCA SMU.1775c 1678767 - 1678588 - | hypothetical protein SMU.1776c 1679243 - 1678998 - | hypothetical protein TERM 1847 1679448 - 1679424 - R 72 -5 -4.78752 | opp_overlap 1679410 1679424 ACGATAATTGAAAAA GGATCTGAAA ATTTA TCTCAGTTCC TTTTTTCTATTGTTG TERM 1848 1679424 - 1679448 + r 75 -2.8 -5.55695 | opp_overlap 1679424, overlap 1679410 ACGATAATTGAAAAA GGATCTGAAA ATTTA TCTCAGTTCC TTTTTTCTATTGTTG nrdI 1679958 - 1679497 - | hypothetical protein SMU.1779c 1681347 - 1679968 - | putative RNA methyltransferase TERM 1849 1681300 - 1681324 + g 83 -6.5 -5.14626 | overlap 1681302 1681315 TTCACCGTTAATTCC CATTCTCTTGA TTT TCAAGGGAATC TTTTGTTTTACTCGT TERM 1850 1681302 - 1681322 + g 79 -9.1 -4.18807 | overlap 1681300 1681315 CACCGTTAATTCCCA TTCTCTTGA TTT TCAAGGGAA TCTTTTGTTTTACTC recX 1681383 - 1682159 + | recombination regulator RecX SMU.1781 1682245 - 1682778 + | hypothetical protein TERM 1851 1682791 - 1682805 + F 72 -3.5 -5.13354 | opp_overlap 1682791, overlap 1682787 TAAAGTTGTCAAAAA GCACT TCAGT GGTGC TTTCTTTTTTATAGA SMU.1782 1682838 - 1683158 + | hypothetical protein TERM 1852 1683303 - 1683281 - T 100 -11.4 -4.55023 | TTGAACATCACAAAA GAGAGAACCA ATC TGATTCTCTC GCACGCTTTATCAAT TERM 1853 1683373 - 1683350 - T 72 -6 -4.44915 | opp_overlap 1683352 CAAGGAGCCATAAAA GAGAAGGTCA AGGG TAGCCTTCTC TCTGGATATGTTATA TERM 1854 1686778 - 1686793 + T 77 -7.6 -3.98114 | overlap 1686771 CTTACTCTCTCTGGC GACTCT TCCC AGAGTC TTCTTCTATTCCCTT TERM 1855 1686835 - 1686854 + T 95 -12.2 -3.62275 | opp_overlap 1686834 1686833 CGCAGTCCTACAACC CCAGAGTG TAAA CACTCTGG TTTGCCCTCCTGCCT TERM 1856 1687171 - 1687193 + T 95 -10.6 -4.30809 | overlap 1687172 GGTTTCTTTTTTGTT TCCCTATAGC TGC GCTATAGGGC TTTTACTAGCTATTC TERM 1857 1687172 - 1687192 + T 100 -14.1 -3.17762 | overlap 1687171 GTTTCTTTTTTGTTT CCCTATAGC TGC GCTATAGGG CTTTTACTAGCTATT TERM 1858 1689287 - 1689242 - T 71 -7.9 -3.41053 | opp_overlap 1689253, overlap 1689243 TCAAAGTATTTATAA TTTTGTCAAGACTTTTTCAAA AGAA TTTCAAAAAGTTTTGACAAAT ACACTATTGATTATT TERM 1859 1689286 - 1689243 - T 86 -11.4 -2.6415 | opp_overlap 1689253, overlap 1689242 CAAAGTATTTATAAT TTTGTCAAGACTTTTTCAAA AGAA TTTCAAAAAGTTTTGACAAA TACACTATTGATTAT TERM 1860 1689392 - 1689370 - T 74 -6.2 -4.49756 | TCTTAAATATCAAAA GGCTGGGC ACAAGTA GCTCAGCC TTCAAAAAAATTCTA proS 1691255 - 1689405 - | prolyl-tRNA synthetase TERM 1861 1690720 - 1690706 - G 71 -4.2 -4.74801 | overlap 1690707 CAACTCTAGTAAAAA TGGCTT CAT AAGCCT TACGATAATCTTCAT SMU.1784c 1692541 - 1691282 - | membrane-associated Zn-dependent protease TERM 1862 1692292 - 1692303 + g 74 -5.8 -4.56914 | TAAGCGTCAAAGCGG CAGG TATC CCTG TTTTAATTTCGCTAG cdsA 1693351 - 1692557 - | putative phosphatidate cytidylyltransferase synthase) uppS 1694115 - 1693366 - | putative undecaprenyl pyrophosphate synthetase TERM 1863 1694104 - 1694117 + g 76 -3.9 -5.26875 | opp_overlap 1694116 TTGTTTTTTTCGTCT TAATG TAAA CATTA TTTTTTCCTTAAAAA TERM 1864 1694220 - 1694198 - R 75 -4.8 -5.0538 | opp_overlap 1694199, overlap 1694199 TTCCAGTTGAAAAAA GCCCCAATCA CAA CGATTGAGGT TTATAATTATTCTTC TERM 1865 1694219 - 1694199 - R 75 -8.3 -3.62746 | opp_overlap 1694199, overlap 1694198 TCCAGTTGAAAAAAG CCCCAATCA CAA CGATTGAGG TTTATAATTATTCTT yajC 1694610 - 1694227 - | preprotein translocase subunit YajC SMU.1788c 1695132 - 1694785 - | putative bacterocin transport accessory protein, Bta TERM 1866 1695313 - 1695295 - R 95 -6 -5.83226 | overlap 1695287 AAGGTAAGAAAAAAA CCTCACAA AAT TTGCAAGG TTTCTTTTTGCTTAT SMU.1789c 1696041 - 1695325 - | hypothetical protein TERM 1867 1695895 - 1695857 - G 77 -9.2 -3.44284 | gap 2, opp_overlap 1695856 1695855, overlap 1695855 GCCTTATCAATAACA TGTTTTGGAACCTGTGCT TGTTT AGCAC-G-TTCCAAAACA AATTTCAAAGCTGAA SMU.1790c 1696921 - 1696187 - | putative transcriptional regulator SMU.1791c 1698107 - 1697007 - | hypothetical protein TERM 1868 1697119 - 1697151 + g 81 -7 -4.80882 | overlap 1697122 AGGGCGTCCCACGGT TGAGACCCGATTCG GGAGA TGATTCGGGTCTTG TTTTTAATATGAGAT TERM 1869 1697122 - 1697148 + g 84 -8.7 -4.50988 | overlap 1697119 GCGTCCCACGGTTGA GACCCGATTCG GGAGA TGATTCGGGTC TTGTTTTTAATATGA TERM 1870 1697262 - 1697273 + g 70 -7.2 -3.85114 | overlap 1697271 ATAGATTAAGATGCG GCGC ACGC GCGC TTTGGTGTAGCGTTT TERM 1871 1698171 - 1698160 - R 71 -3 -5.17507 | overlap 1698166 AAAAGTCAATAAAAA GATA AGTC TATC AGCAATACAAGCGCA SMU.1792c 1698428 - 1698255 - | hypothetical protein TERM 1872 1698411 - 1698399 - G 84 -7.7 -4.7173 | CAGCACAGCTAAAAA TGTGG GCT CCACA ATGGCTGTATAAATC SMU.1794c 1698731 - 1698501 - | hypothetical protein SMU.1795c 1699535 - 1698792 - | hypothetical protein TERM 1873 1699606 - 1699626 + r 71 -6.9 -4.10552 | opp_overlap 1699606 GGTTTCATTCCTAAA CCGAAAG ACTTAAA CTTTCGG TTTCCTTTGATAGCA TERM 1874 1699779 - 1699806 + r 78 -7 -4.48072 | opp_overlap 1699784, overlap 1699784 TTTTCTCTTATTTTC AAAAACCTTGCC ATCT GGCAAGGTTGTC TTTTATGCTAAGTAT TERM 1875 1699784 - 1699801 + r 100 -11.3 -4.04187 | opp_overlap 1699784, overlap 1699779 TCTTATTTTCAAAAA CCTTGCC ATCT GGCAAGG TTGTCTTTTATGCTA TERM 1876 1699801 - 1699784 - R 100 -11.3 -4.59773 | opp_overlap 1699779 1699784 TCTTATTTTCAAAAA CCTTGCC ATCT GGCAAGG TTGTCTTTTATGCTA SMU.1797c 1700162 - 1699809 - | hypothetical protein SMU.1798c 1700756 - 1700163 - | hypothetical protein nadD 1701385 - 1700753 - | nicotinic acid mononucleotide adenylyltransferase SMU.1800c 1701720 - 1701412 - | hypothetical protein TERM 1877 1701629 - 1701643 + g 72 -5.7 -4.61231 | ACGCTGGTTTTGATT TGGTC GTTGA GACCA TTTTTCCCAATCTGC SMU.1801c 1702883 - 1701777 - | GTP-binding protein YqeH SMU.1802c 1703411 - 1702884 - | hypothetical protein TERM 1878 1703507 - 1703480 - R 79 -4.9 -5.1356 | gap 1, opp_overlap 1703480, overlap 1703481 GGCGAGGAAGAAAAA GCCCT-GTTATC TGCTT GATAGCAAGGGC TTAAATCGTTAATTT SMU.1803c 1704133 - 1703516 - | hypothetical protein SMU.1804c 1704304 - 1704149 - | hypothetical protein TERM 1879 1704461 - 1704447 - H 83 -5.7 -5.1925 | opp_overlap 1704447 CTATAATCTAAAAAA CAGAC TGTTG GTCTG TTTTATGAAAAAGAA TERM 1880 1704447 - 1704461 + H 74 -6.4 -4.36914 | opp_overlap 1704447 CTATAATCTAAAAAA CAGACT GTT GGTCTG TTTTATGAAAAAGAA SMU.1805 1704542 - 1705138 + | putative transcriptional regulator TERM 1881 1705502 - 1705492 - g 79 -4 -5.37593 | opp_overlap 1705492 CCTTAAATGAAAAAA TTCT GAC AGAA TTTGGGAAAACAGGT SMU.1806 1705116 - 1706285 + | putative glycosyltransferase TERM 1882 1706287 - 1706335 + T 77 -9.3 -3.22774 | gap 1, opp_overlap 1706291 1706295 1706296 1706303, overlap 1706291 1706296 1706303 1706328 AAACCAAACCTTAAT CAAATAGAGCAAAAAATCTGAG ATGGAA CTCAGATTTTTT-CTTTATTGG TTACTAATAAGTCTC TERM 1883 1706291 - 1706331 + T 76 -8.7 -3.41693 | gap 1, opp_overlap 1706291 1706295 1706296 1706303, overlap 1706287 1706296 1706303 1706328 CAAACCTTAATCAAA TAGAGCAAAAAATCTGAG ATGGAA CTCAGATTTTTT-CTTTA TTGGTTACTAATAAG TERM 1884 1706296 - 1706327 + T 80 -7.5 -4.34737 | opp_overlap 1706295 1706291 1706296 1706303, overlap 1706291 1706287 1706303 CTTAATCAAATAGAG CAAAAAATCTGAG ATGGAA CTCAGATTTTTTC TTTATTGGTTACTAA TERM 1885 1706303 - 1706320 + T 91 -5.6 -5.80003 | opp_overlap 1706295 1706296 1706291 1706303, overlap 1706296 1706291 1706287 AAATAGAGCAAAAAA TCTGAG ATGGAA CTCAGA TTTTTTCTTTATTGG TERM 1886 1706320 - 1706303 - T 80 -5.6 -5.28755 | opp_overlap 1706303 1706296 1706291 1706287, overlap 1706295 1706296 1706291 AAATAGAGCAAAAAA TCTGAG ATGGAA CTCAGA TTTTTTCTTTATTGG SMU.1807c 1707224 - 1706316 - | putative integral membrane protein, permease TERM 1887 1707293 - 1707279 - R 74 -4.2 -5.14563 | opp_overlap 1707279 1707287 TTTTCTATCAAAAAA CCAGCA CCC TGATGG TTTAAGCTTCATCAG SMU.1808c 1707414 - 1707319 - | putative integrase fragment scnG 1708519 - 1707788 - | putative bacteroiocin operon protein ScnG-like protein scnE 1709271 - 1708519 - | putative bacteriocin operon component, ScnE-like protein TERM 1888 1709244 - 1709262 + g 72 -6 -4.50976 | TTCGCTTGCTTTTCA GCCATTCA ACT TGAATTGC TTTTGTCATCTCAAA scnF 1710181 - 1709273 - | putative bacteriocin component ScnF homolog, putative ABC transporter, ATP-binding protein TERM 1889 1710397 - 1710348 - H 70 -8 -3.04947 | opp_overlap 1710349, overlap 1710393 1710395 CAACAAAAAAACTCA GGCTCTATAATTTCTGTAGTGG GTAAAA CCACTGTAGAGATTATAGAGCT TTTTGAGTGTACACA TERM 1890 1710349 - 1710396 + H 100 -18.1 -4.70659 | opp_overlap 1710348 1710393 1710395 AACAAAAAAACTCAG GCTCTATAATTTCTGTAGTGG GTAAAA CCACTGTAGAGATTATAGAGC TTTTTGAGTGTACAC SMU.1812 1710468 - 1711718 + | putative transposase, ISSmu2 SMU.1813 1712141 - 1712251 + | putative putative transposase scnK 1713683 - 1712304 - | putative histidine kinase, ScnK-like protein TERM 1891 1712406 - 1712420 + g 70 -7.2 -3.85184 | CATATCACCATTATG CAAATC AAT GATTTG TTTAGATATTTTCAA scnR 1714399 - 1713701 - | putative response regulator; ScnR-like protein TERM 1892 1713754 - 1713771 + g 76 -2.7 -5.40625 | overlap 1713756 TGAGATGCACTGGCT TTGAGGA GTTT TTCTCGA TTTTTTCTCTGATAT SMU.1816c 1714737 - 1714504 - | putative maturase-related protein SMU.1817c 1715277 - 1715071 - | putative maturase-related protein TERM 1893 1715410 - 1715430 + r 73 -8.3 -3.53091 | opp_overlap 1715411, overlap 1715411 GGGTCGGAATCCATA ACTCGTTTC GGA GAAACGAGG TTTACAGAAAGGACT TERM 1894 1715429 - 1715411 - R 91 -11.8 -3.41878 | opp_overlap 1715410 1715411 GGTCGGAATCCATAA CTCGTTTC GGA GAAACGAG GTTTACAGAAAGGAC TERM 1895 1715411 - 1715429 + r 87 -11.8 -2.71712 | opp_overlap 1715411, overlap 1715410 GGTCGGAATCCATAA CTCGTTTC GGA GAAACGAG GTTTACAGAAAGGAC SMU.1818c 1715749 - 1715576 - | hypothetical protein TERM 1896 1715683 - 1715709 + g 81 -9.4 -4.02468 | opp_overlap 1715683, overlap 1715676 ATTGGGCATGACGAA GAGCGCTCCC TTGTCCT GGGAACGCTC TTTCTCCATATTTTT TERM 1897 1715709 - 1715683 - G 83 -11.6 -3.21218 | opp_overlap 1715683 1715676 ATTGGGCATGACGAA GAGCGCTCCC TTGTCCT GGGAACGCTC TTTCTCCATATTTTT gatB 1717441 - 1716002 - | aspartyl/glutamyl-tRNA amidotransferase subunit B gatA 1718907 - 1717441 - | aspartyl/glutamyl-tRNA amidotransferase subunit A TERM 1898 1718325 - 1718315 - G 77 -6.8 -4.62054 | GCAATCAAACCAAAA CGTG ATA CACG ACCGTAAGTTGGCTT gatC 1719209 - 1718907 - | aspartyl/glutamyl-tRNA amidotransferase subunit C gatA 1721087 - 1719336 - | putative aspartyl-tRNA synthetase TERM 1899 1721148 - 1721115 - R 74 -3.1 -5.45802 | opp_overlap 1721143, overlap 1721116 1721143 TTCGTAAAATAAAAA GCACCACCTTCATCT AAAC AGACGAAGACCGTGG TGCCACTGTTATTTG pncA 1721896 - 1721345 - | putative pyrazinamidase/nicotinamidase SMU.1824c 1722683 - 1721898 - | transcriptional repressor CodY yfbQ 1724009 - 1722792 - | aminotransferase AlaT SMU.1827 1724183 - 1724719 + | putative biotin biosynthesis protein SMU.1828 1724817 - 1725266 + | hypothetical protein TERM 1900 1725373 - 1725337 - T 100 -10.5 -5.2166 | gap 1, opp_overlap 1725337 CAACAACGTAAAAAA GCTTAAAACCAATGTT TTTGAT AAC-TTGGTTTTAAGC TTTTTTACTATTGGG TERM 1901 1725337 - 1725373 + T 100 -10.5 -5.27779 | gap 1, opp_overlap 1725337 CAACAACGTAAAAAA GCTTAAAACCAATGTT TTTGAT AAC-TTGGTTTTAAGC TTTTTTACTATTGGG TERM 1902 1725454 - 1725444 - T 71 -3.2 -5.27476 | opp_overlap 1725445, overlap 1725445 TTGAACAAAATAAAA GCCA GTA TAGC TGGTAATATGGCCTA SMU.1830c 1726944 - 1725544 - | hypothetical protein TERM 1903 1725745 - 1725727 - G 70 -3 -5.15634 | TACTGTATCAAAAAA GGGTTTAG GGT CTACTCCC ATTAATACAAAGGAA TERM 1904 1726799 - 1726787 - G 79 -6.9 -4.6635 | AAAGGCGCAACAAAA GCCGG ACC CCGAC CAGTTGCTACACCAA TERM 1905 1727565 - 1727579 + G 71 -6.4 -4.14243 | opp_overlap 1727564, overlap 1727566 CTTTTTCAAAACAGC TGAACC GCG GGTTCG TTTTCGCCTAGAATC aspG 1727002 - 1727961 + | putative L-asparaginase SMU.1832 1727988 - 1728152 + | hypothetical protein recG 1730310 - 1728295 - | putative ATP-dependent DNA helicase, RecG TERM 1906 1730492 - 1730473 - R 79 -5 -5.2166 | opp_overlap 1730473 1730467 TAATAAGCCAAAAAA GTTCAGCC ACTT AACTGAAC TTTTTATCATATTTT alr 1731598 - 1730483 - | alanine racemase TERM 1907 1730563 - 1730586 + g 77 -10.4 -2.96873 | overlap 1730559 TAATCGTCTCTCGTT TTTCAGCGAC ATCT GTTGCTGAAA TCGTTTCATGACCAT acpS 1731954 - 1731595 - | 4'-phosphopantetheinyl transferase TERM 1908 1732068 - 1732036 - R 88 -7.1 -5.09204 | opp_overlap 1732044, overlap 1732037 AGAGTGGAATAAAAA GCGCTAAATCGCAAT TTC ATTACGATTTATCGT CCTGCTTTCCGAAAA TERM 1909 1732067 - 1732037 - R 87 -10.6 -3.64438 | opp_overlap 1732044, overlap 1732036 GAGTGGAATAAAAAG CGCTAAATCGCAAT TTC ATTACGATTTATCG TCCTGCTTTCCGAAA aroG 1733258 - 1732224 - | phospho-2-dehydro-3-deoxyheptonate aldolase aroH 1734291 - 1733260 - | phospho-2-dehydro-3-deoxyheptonate aldolase secA 1736830 - 1734311 - | preprotein translocase subunit SecA TERM 1910 1736942 - 1736921 - R 100 -10.9 -4.32607 | opp_overlap 1736917 TCAAAAGCTAATAAA GAGGCAGAA ACTT TTCTGCCCC CATAGCTTTATCTTA manA 1737958 - 1737008 - | mannose-6-phosphate isomerase TERM 1911 1737893 - 1737915 + g 88 -3.3 -5.68039 | ATAACCAAATTCTTT TCTGAGCCG ATTGC CGCCCCAGA TTTTTTTATGCATTT scrK 1739008 - 1738127 - | putative fructokinase TERM 1912 1739173 - 1739198 + r 74 -9.1 -2.99258 | opp_overlap 1739172 1739180, overlap 1739180 GAATCTTTTAAGCAG TCAAAAAGACC TTAC GGTCTTTCTGA TAATATTTCTTATTT TERM 1913 1739191 - 1739180 - R 74 -5.8 -4.7078 | opp_overlap 1739180 1739173, overlap 1739172 TTAAGCAGTCAAAAA GACC TTAC GGTC TTTCTGATAATATTT scrA 1741202 - 1739208 - | putative PTS system, sucrose-specific IIABC component TERM 1914 1739683 - 1739696 + g 75 -8.1 -3.83262 | overlap 1739681 1739689 ACTTGTGCCTTATTT GCTGC AGAA GCAGC TTCTTCTGGAATTTC TERM 1915 1740040 - 1740063 + g 79 -9 -4.0865 | opp_overlap 1740043, overlap 1740043 1740060 GCTGACACACCTGAA GAAGATGAGA GACC TTTCATCTTC TTATCTTTTGTTAAG scrB 1741398 - 1742837 + | sucrose-6-phosphate hydrolase TERM 1916 1743106 - 1743119 + G 71 -6.7 -4.07133 | opp_overlap 1743104 1743106 AGAGTTGTTTAAACA TGGCT ACAA AGCCA TTATTTGTAACAGTC TERM 1917 1743162 - 1743139 - g 71 -8.2 -3.42503 | opp_overlap 1743142, overlap 1743142 1743155 TTGTAACAGTCAGAA TAATCCCGAT AAAG AACGGGATTA TCTCGAAATGTTAGA scrR 1742840 - 1743802 + | sucrose operon repressor TERM 1918 1743980 - 1743944 - T 100 -16.9 -4.81249 | opp_overlap 1743944 TTTTAAATTCAAAAA GAAGAGGTAAGATTTAA GCC TAAAATCTTACCTCTTC TTTTATCAGCCCTTA TERM 1919 1743944 - 1743980 + T 100 -16.9 -4.386 | opp_overlap 1743944 TTTTAAATTCAAAAA GAAGAGGTAAGATTTAA GCC TAAAATCTTACCTCTTC TTTTATCAGCCCTTA nusB 1744424 - 1743996 - | transcription antitermination protein NusB TERM 1920 1744381 - 1744367 - G 100 -8.6 -5.64421 | overlap 1744378 ATTCCAAAGAAAAAA GTGCTT GAA AAGCAC GTTCACGAAGATCGC SMU.1846c 1744806 - 1744417 - | hypothetical protein efp 1745409 - 1744849 - | elongation factor P SMU.1848 1745549 - 1746253 + | hypothetical protein TERM 1921 1746292 - 1746259 - T 79 -6.9 -4.64361 | opp_overlap 1746259 1746258 TAAAAAATAGGAAAA GCTCTTAGAGT GTCGTTTATATA ACTCTAAGAGC CTTTTTAATTACTTT comEB 1746753 - 1746301 - | putative deoxycytidylate deaminase pepP 1747987 - 1746923 - | putative aminopeptidase P uvrA 1750808 - 1747977 - | excinuclease ABC subunit A TERM 1922 1751534 - 1751522 - g 72 -6.3 -4.50159 | opp_overlap 1751530 CCGAATTTAAAGAAA TCGAA ACA TTCGA GCCAGGTGCTTGGAT SMU.1852 1751479 - 1752423 + | putative magnesium/cobalt transport protein TERM 1923 1752505 - 1752543 + F 100 -15.4 -3.24 | opp_overlap 1752515, overlap 1752498 1752511 CTAACCCACTTACTT GCGCAAGGAAGAGAATAG TAT CGATTCTCTCCCTTGTGC TTCGTAACTTCCTTT TERM 1924 1752511 - 1752537 + F 73 -8 -3.54297 | opp_overlap 1752515, overlap 1752505 1752498 CACTTACTTGCGCAA GGAAGAGAATAG TAT CGATTCTCTCCC TTGTGCTTCGTAACT TERM 1925 1752563 - 1752586 + F 89 -11.8 -3.30124 | overlap 1752565 TAACTTCCTTTATAT TGTCGGATGC TTAA GTATCCGACA TTCTACAGCATCCGC TERM 1926 1752859 - 1752845 - g 100 -7.8 -5.2853 | opp_overlap 1752844 TATCGAAAAACAAAA GCAAGG AAT CCCTGC ACGTTCTTTTTTGGG SMU.1853 1752705 - 1753367 + | hypothetical protein TERM 1927 1753397 - 1753439 + F 91 -8 -4.95758 | opp_overlap 1753406 1753426, overlap 1753406 TGGTTACCTCTTAGA CATTAAAAATGACCACTT AATAGAA AAGTGGTCATTTTTAACC TTTTTATGCTATAGT TERM 1928 1753406 - 1753430 + F 93 -8.7 -4.7657 | opp_overlap 1753406 1753426, overlap 1753397 CTTAGACATTAAAAA TGACCACTT AATAGAA AAGTGGTCA TTTTTAACCTTTTTA TERM 1929 1753430 - 1753406 - f 93 -8.7 -4.84527 | opp_overlap 1753406 1753397, overlap 1753426 CTTAGACATTAAAAA TGACCACTT AATAGAA AAGTGGTCA TTTTTAACCTTTTTA SMU.1854 1753461 - 1753862 + | hypothetical protein TERM 1930 1754004 - 1754014 + G 78 -3.2 -5.38054 | TAGCTTTGAGTAACA GGAG TAT CTTC TTTTTCTTTCTAGCC TERM 1931 1754052 - 1754067 + G 70 -6.2 -4.30441 | TTCTTAGTATCTACT TGAAAG ATAT CTTTCA TTTTGACTATTCTAC SMU.1855 1753859 - 1754545 + | hypothetical protein SMU.1856c 1755272 - 1754553 - | hypothetical protein TERM 1932 1755429 - 1755402 - R 74 -9.2 -3.15999 | opp_overlap 1755397 1755403, overlap 1755405 GTTGCACAGATTGAA GGAGTTTGAGAC TTTT GTCCCAAACTCT TTGACATTTTGAATC TERM 1933 1755403 - 1755428 + r 89 -10.5 -3.76815 | opp_overlap 1755402 1755405, overlap 1755397 TTGCACAGATTGAAG GAGTTTGAGAC TTTT GTCCCAAACTC TTTGACATTTTGAAT TERM 1934 1755426 - 1755405 - R 74 -9.5 -2.78154 | opp_overlap 1755403 1755397, overlap 1755402 GCACAGATTGAAGGA GTTTGAGAC TTTT GTCCCAAAC TCTTTGACATTTTGA TERM 1935 1755542 - 1755498 - R 100 -12.4 -4.27117 | opp_overlap 1755504, overlap 1755499 1755504 TTTTTAGAAGACAAA CTAAAAGGACTCAGCCCTGT GCAAT ACAGGACTAAATCCTTTCAA TAATTTCTTGTCCAA TERM 1936 1755541 - 1755499 - R 100 -13.7 -3.15788 | opp_overlap 1755504, overlap 1755498 1755504 TTTTAGAAGACAAAC TAAAAGGACTCAGCCCTGT GCAAT ACAGGACTAAATCCTTTCA ATAATTTCTTGTCCA TERM 1937 1755536 - 1755504 - R 100 -11.4 -4.67563 | opp_overlap 1755504, overlap 1755499 1755498 GAAGACAAACTAAAA GGACTCAGCCCTGT GCAAT ACAGGACTAAATCC TTTCAATAATTTCTT TERM 1938 1755621 - 1755610 - R 72 -5.8 -4.42386 | TCTTCATTTACAAAA GGCA TAAG TGCC ATTACGCGAGCACGT rpsR 1755830 - 1755591 - | 30S ribosomal protein S18 TERM 1939 1755691 - 1755710 + g 72 -8.6 -3.28712 | GTCCCTGTCACACGG CGTGGAAG AATC TTTCCACG TTCTGAAACAAAACG ssb 1756353 - 1755859 - | single-strand DNA-binding protein TERM 1940 1756041 - 1756057 + g 70 -8.1 -3.28791 | CACGTGTAGCACGAC TTTCCAA AAT TTGGAAA TTATCCGCAACAACT rpsF 1756661 - 1756371 - | 30S ribosomal protein S6 TERM 1941 1756795 - 1756807 + r 75 -4.9 -4.99645 | ACAAATTAATGTTCA GAATT TAG AATTC TTTTATTTATCACAT SMU.1861c 1757062 - 1756817 - | hypothetical protein TERM 1942 1757208 - 1757198 - H 80 -5.4 -5.14698 | AAAGCTAAAAGAAAA GCAT TGT ATGC ATATATTGACTTTCA SMU.1862 1757367 - 1757570 + | hypothetical protein TERM 1943 1757896 - 1757935 + F 74 -6.5 -4.37507 | opp_overlap 1757894 1757898, overlap 1757894 1757898 ACCTTCAATACAATT AAGACCCCCAACAAT CTACACGCTC ATCGTTGGGGGTCTC TTATTATTTTGTTTT TERM 1944 1757933 - 1757898 - f 90 -11.3 -3.54382 | opp_overlap 1757896 1757894 1757898, overlap 1757894 CTTCAATACAATTAA GACCCCCAACAAT CTACACGCTC ATCGTTGGGGGTC TCTTATTATTTTGTT TERM 1945 1757898 - 1757933 + F 80 -9.1 -3.73299 | opp_overlap 1757898 1757894, overlap 1757896 1757894 CTTCAATACAATTAA GACCCCCAACAAT CTACACGCTC ATCGTTGGGGGTC TCTTATTATTTTGTT TERM 1946 1758618 - 1758600 - f 71 -7.6 -3.50393 | GGGCATTTGATACAA TAGATTTA TGT TAAATCTA AGTGACTACGGCATT mutY 1758607 - 1759752 + | putative A/G-specific DNA glycosylase TERM 1947 1759892 - 1759834 - T 100 -22.3 -3.50532 | opp_overlap 1759834 1759835 1759843 1759851, overlap 1759837 1759851 ACTGAAATCAATCAA TTATTATAAGCACAAAAGCCACTGA AAAATAAAA TCAGTGGCTTTTGTGCTTATAAAAA ATATTTAACACCAAA TERM 1948 1759834 - 1759892 + T 100 -22.3 -2.60496 | opp_overlap 1759834 1759837 1759851, overlap 1759835 1759843 1759851 ACTGAAATCAATCAA TTATTATAAGCACAAAAGCCACTGA AAAATAAAA TCAGTGGCTTTTGTGCTTATAAAAA ATATTTAACACCAAA TERM 1949 1759835 - 1759893 + T 78 -9.4 -3.34398 | gap 2, opp_overlap 1759834 1759837 1759851, overlap 1759834 1759843 1759851 CTGAAATCAATCAAT --TATTATAAGCACAAAAGCCACTGA AAAATAAAA TCAGTGGCTTTTGTGCTTATAAAAAA TATTTAACACCAAAC TERM 1950 1759889 - 1759837 - T 100 -24 -2.88425 | opp_overlap 1759834 1759835 1759843 1759851, overlap 1759834 1759851 GAAATCAATCAATTA TTATAAGCACAAAAGCCACTGA AAAATAAAA TCAGTGGCTTTTGTGCTTATAA AAAATATTTAACACC TERM 1951 1759843 - 1759883 + T 100 -18.6 -3.31515 | opp_overlap 1759837 1759834 1759851, overlap 1759834 1759835 1759851 AATCAATTATTATAA GCACAAAAGCCACTGA AAAATAAAA TCAGTGGCTTTTGTGC TTATAAAAAATATTT TERM 1952 1759851 - 1759875 + T 80 -7.2 -4.58466 | opp_overlap 1759837 1759834 1759851, overlap 1759843 1759834 1759835 ATTATAAGCACAAAA GCCACTGA AAAATAAAA TCAGTGGC TTTTGTGCTTATAAA TERM 1953 1759875 - 1759851 - T 80 -7.2 -4.59069 | opp_overlap 1759851 1759843 1759834 1759835, overlap 1759837 1759834 ATTATAAGCACAAAA GCCACTGA AAAATAAAA TCAGTGGC TTTTGTGCTTATAAA SMU.1867c 1760989 - 1759940 - | putative alcohol dehydrogenase TERM 1954 1761080 - 1761065 - R 93 -6.1 -5.52384 | opp_overlap 1761065 1761064 TTTTTATCAAAAAAA CAGGC ATTGAA GCCTG CTTATACTATGCAAG TERM 1955 1761099 - 1761111 + r 73 -7.7 -3.63195 | ATACTATGCAAGTTC GGCTA CAA TAGCC TTAATTTGATCTTTC trxA 1761401 - 1761087 - | putative thioredoxin mutS2 1763806 - 1761476 - | putative DNA mismatch repair protein MutS2 TERM 1956 1761740 - 1761756 + g 75 -6.6 -4.41206 | TTGAGAAGTCCTTTT GACAAG GTGAG CTTGTC TTTTCTGCGATGCTT TERM 1957 1763401 - 1763384 - G 79 -7.7 -4.19974 | opp_overlap 1763384 1763388 AAAATCTTCAATAAA GCCACCA TCAT TGATGGC TTGTAAACTCCCTTG TERM 1958 1763878 - 1763862 - R 86 -5.8 -5.47914 | opp_overlap 1763862 AAAAATGATAAAAAA GCGAGG ACAAA CCTCAC TTCACTATTGTTGTT SMU.1871c 1764420 - 1763875 - | hypothetical protein TERM 1959 1764028 - 1764018 - G 86 -5.4 -5.54264 | AAACATTCAAAAAAA GACT AAC AGTC AGCATAGTCACTAAT SMU.1872c 1764722 - 1764417 - | hypothetical protein TERM 1960 1764814 - 1764853 + H 90 -11.2 -3.80014 | opp_overlap 1764814 1764810, overlap 1764828 CTATAAAATAAGGAA TTATCTTTTAAAAGTTTT TTGT AAAAATTTTAAAAGATAA TTTAATCATAAATAT TERM 1961 1764853 - 1764814 - H 89 -11.2 -3.72078 | opp_overlap 1764814 1764828, overlap 1764810 CTATAAAATAAGGAA TTATCTTTTAAAAGTTTT TTGT AAAAATTTTAAAAGATAA TTTAATCATAAATAT rnh3 1764918 - 1765829 + | ribonuclease HIII lepC 1765849 - 1766436 + | putative signal peptidase I TERM 1962 1766453 - 1766502 + F 100 -11.7 -4.72272 | gap 1, opp_overlap 1766459 1766469, overlap 1766454 AAGTTTTTATCTCTA ACGGAAGCAGAGTACAGTTCAGAA ATC TTTTGAACT-TATTCCGCTTCCGA TTTTTAATAAGGAAA TERM 1963 1766454 - 1766501 + F 100 -15.2 -3.43042 | gap 1, opp_overlap 1766459 1766469, overlap 1766453 AGTTTTTATCTCTAA CGGAAGCAGAGTACAGTTCAGAA ATC TTTTGAACT-TATTCCGCTTCCG ATTTTTAATAAGGAA TERM 1964 1767039 - 1767015 - g 75 -4.4 -5.02606 | gap 1, overlap 1767017 GATTAAATAACAAAA CAGCTGTTCAA ATTT TTGAAC-GCTA TAAAGAAGAAAGTTT SMU.1875 1766522 - 1768885 + | putative exodeoxyribonuclease V, conjugation transfer protein SMU.1876 1768984 - 1769454 + | hypothetical protein TERM 1965 1769521 - 1769572 + F 83 -5.7 -5.14477 | gap 3, opp_overlap 1769532 TTTAATGCTAAAAAA GAGTGTGATA-AGAAGT-A-AAAATC TTA GATTTTCTGACTTCTATATTACGCTC TTTTTTGCCTATCTC TERM 1966 1770275 - 1770288 + F 70 -3.9 -4.96848 | opp_overlap 1770275 TTCTTTAATTAAAGA GAATA ACAT TATTC TTTTTATCTGAGAAA ptnA 1770331 - 1771323 + | putative PTS system, mannose-specific component IIAB ptnC 1771358 - 1772176 + | putative PTS system, mannose-specific component IIC TERM 1967 1772344 - 1772329 - g 70 -2.6 -5.1675 | CCAGCTATCAAAAAA CTTTAT ACAA ACAAAG AAGATCGTGCTGCCG TERM 1968 1772517 - 1772533 + G 77 -6.5 -4.67256 | GATGGGACCATTAGC CGGTATC GGA GATCCCG TTTTCTGGTTTGTTC TERM 1969 1772566 - 1772576 + G 73 -8.2 -3.68325 | opp_overlap 1772560 1772563 CGCCCAACACTAGGT GCCC TTG GGGC TTCTCTTGCAATATC SMU.1879 1772191 - 1773117 + | putative PTS system, mannose-specific component IID TERM 1970 1773136 - 1773166 + T 93 -6.3 -5.66989 | overlap 1773148 AAAAATTAGAATTTT CCATATCTGATTT CAAAA AAATTGGGTATGG TTTTTTTGATATTTC TERM 1971 1773254 - 1773202 - T 71 -2.3 -5.42131 | gap 1, overlap 1773207 1773232 1773236 GAATGATACAAAAAA TAAAATGC-ATCCCAACAATTAGA AAAAAA TCTAACAATTAGGATTGCACTTCA CATTTGTGTAAAAGT TERM 1972 1773249 - 1773207 - T 71 -2.2 -5.51612 | gap 1, overlap 1773202 1773232 1773236 ATACAAAAAATAAAA TGC-ATCCCAACAATTAGA AAAAAA TCTAACAATTAGGATTGCA CTTCACATTTGTGTA SMU.1881c 1775740 - 1773449 - | putative ABC transporter, ATP-binding protein TERM 1973 1774776 - 1774753 - G 84 -4.6 -5.65678 | opp_overlap 1774753, overlap 1774770 AGAAAATAGAAAAAA TTGTTGACGC CACA GCATCAATAA TTTGATTGGCATCAG TERM 1974 1775887 - 1775865 - R 89 -7.6 -5.06414 | TGTCCTTAACAAAAA GCCTGACATC TAT GTAGTCAGGC TAGTGCTCATATTAG SMU.1882c 1776643 - 1776290 - | hypothetical protein TERM 1975 1776770 - 1776744 - H 87 -10.4 -3.69323 | opp_overlap 1776743 1776740 1776744, overlap 1776749 TTAGTATTATTGAAA TATAATAGCAAA TAT TCTGCTATTATA ATTATTTTCTTAGTA TERM 1976 1776744 - 1776770 + H 71 -8.2 -3.26868 | opp_overlap 1776744 1776749, overlap 1776743 1776740 TTAGTATTATTGAAA TATAATAGCAAA TAT TCTGCTATTATA ATTATTTTCTTAGTA SMU.1883 1776962 - 1777330 + | hypothetical protein SMU.1884c 1778640 - 1777567 - | hypothetical protein TERM 1977 1778003 - 1777992 - G 70 -3 -5.14985 | TTAAACACAGAAAAA GTAA AAAT TTAC GACTGAATAAACGCT TERM 1978 1778608 - 1778618 + g 76 -2.6 -5.39221 | TCCAGCATTATATGG TAAA CTT TTTA TTTTTTCATTCTTCT sys 1779164 - 1780444 + | seryl-tRNA synthetase TERM 1979 1780505 - 1780465 - f 72 -2.5 -5.50774 | CAGAACAAATAAAAA GCACCCCAAAAATTAGACT AAA ACTCTAACGATTGAGGGGC TTTTCTTATGATCTT SMU.1888 1780765 - 1780971 + | putative transposase TERM 1980 1780964 - 1780954 - T 83 -6.8 -4.76874 | opp_overlap 1780954 AAGACAAAATTAAAA GGAC TGA GTCC TGTCTAATACAGAAA SMU.1889c 1781393 - 1781127 - | hypothetical protein TERM 1981 1781203 - 1781189 - G 74 -8.6 -3.3907 | overlap 1781179 CTAAATCCCAACCAA TTGCTG CAC CAGCAA TAGGACCGAGACCTC SMU.1891c 1781749 - 1781567 - | hypothetical protein SMU.1892c 1781879 - 1781694 - | hypothetical protein TERM 1982 1781978 - 1781956 - R 77 -4 -5.40072 | overlap 1781960 CCCTTTGTAAAAAAA GAGACAGGAC TTT GTACTGACCC CAAAAAGTTAGACAA TERM 1983 1782008 - 1782040 + r 95 -10.7 -4.69549 | opp_overlap 1782008 AAAAATTTAAGTAAA GGATTTCGTTCTGTA CTG TACAGGACTAAGTCC TTTTAGTTTTACCTT SMU.1893c 1782835 - 1781999 - | putative transposase, ISSmu1 TERM 1984 1782840 - 1782852 + r 79 -4.8 -5.31855 | TCCGTTACCAATCCT CGGA CAATT TCCG TTTTTCTTCTTGCTC SMU.1894c 1783347 - 1782829 - | hypothetical protein TERM 1985 1783396 - 1783356 - R 100 -17.2 -5.19328 | opp_overlap 1783353 ATTTCATAATAAAAA CACCCCAAAAGTTAGA TTTTTTCTG TCTAACTTTTGGGGTG CAGTTCACTTTTGAA SMU.1895c 1783617 - 1783456 - | hypothetical protein TERM 1986 1783530 - 1783502 - G 74 -5.3 -4.74103 | opp_overlap 1783502 TTTGGAATGTAAAAA GATCCTATAGTTG CAC CAACAATAGCACC TATTTCTGCCCAAGT SMU.1896c 1783964 - 1783662 - | hypothetical protein TERM 1987 1784770 - 1784719 - g 79 -8.3 -4.11394 | gap 1, opp_overlap 1784719 ATCCTACTGTTAAAA TAGCAACACCTGTCCAAATC GCAATTTGCAGAA GAAT-GGACAGGTGTTGCTA TTTTTCTGGCACCTG TERM 1988 1784719 - 1784770 + G 87 -8.3 -4.83615 | gap 1, opp_overlap 1784719 ATCCTACTGTTAAAA TAGCAACACCTGTCCAAATC GCAATTTGCAGAA GAAT-GGACAGGTGTTGCTA TTTTTCTGGCACCTG SMU.1897 1784304 - 1784786 + | putative ABC transporter, ATP-binding protein SMU.1898 1784881 - 1786392 + | putative ABC transporter, ATP-binding and permease protein SMU.1899 1786364 - 1786489 + | putative ABC transporter, ATP-binding and permease protein (fragment) TERM 1989 1786767 - 1786752 - g 78 -3.2 -5.40474 | overlap 1786753 ACGCCGTTAAAAAAA GGGATG TTCT CATCCA ATATGTTAATCCAGC SMU.1900 1786502 - 1787515 + | hypothetical protein TERM 1990 1787728 - 1787749 + T 81 -2.1 -6.06529 | opp_overlap 1787729, overlap 1787729 TCTTACATATAAAAA ACGGGGCTT TTGA ACGCTCCGC TTTTTTTTATATGTA TERM 1991 1787748 - 1787729 - T 76 -3.4 -5.4251 | opp_overlap 1787729 1787728 CTTACATATAAAAAA CGGGGCTT TTGA ACGCTCCG CTTTTTTTTATATGT SMU.1902c 1787920 - 1787777 - | hypothetical protein SMU.1903c 1788139 - 1787987 - | hypothetical protein SMU.1904c 1789234 - 1788212 - | hypothetical protein TERM 1992 1789051 - 1789092 + g 100 -12.5 -3.93009 | overlap 1789044 1789052 TCGAAGCAGTCGTTG CTGCTGGTGCTACTGTT TCCTGAAC AACAGTAGCATCAGCAC TTTGAGTTTCTGTTG TERM 1993 1789052 - 1789091 + g 100 -16 -2.94721 | overlap 1789051 1789044 CGAAGCAGTCGTTGC TGCTGGTGCTACTGTT TCCTGAAC AACAGTAGCATCAGCA CTTTGAGTTTCTGTT TERM 1994 1789107 - 1789126 + g 70 -7.8 -3.56361 | CTTTGAGTTTCTGTT GTGACTGC AGAT GCAGACAC TTCCGTTTTTTCTAT SMU.1905c 1789908 - 1789720 - | putative bacteriocin secretion protein TERM 1995 1789942 - 1789993 + r 100 -9.6 -5.59502 | opp_overlap 1789944 1789961, overlap 1789943 1789944 ATTTACATAAAGCAT AAGCTCTATAATATCGAAAGTGGG TTGA CCTACTATAGATATTATAGAGCCG TTTTTTCATTTTTTC TERM 1996 1789943 - 1789992 + r 100 -13.1 -3.92041 | opp_overlap 1789944 1789961, overlap 1789942 1789944 TTTACATAAAGCATA AGCTCTATAATATCGAAAGTGGG TTGA CCTACTATAGATATTATAGAGCC GTTTTTTCATTTTTT TERM 1997 1789944 - 1789991 + r 100 -16.6 -2.91564 | opp_overlap 1789944 1789961, overlap 1789943 1789942 TTACATAAAGCATAA GCTCTATAATATCGAAAGTGGG TTGA CCTACTATAGATATTATAGAGC CGTTTTTTCATTTTT TERM 1998 1789991 - 1789944 - R 100 -14.4 -3.67102 | opp_overlap 1789944 1789943 1789942, overlap 1789961 TTACATAAAGCATAA GCTCTATAATATCGAAAGTGGG TTGA CCTACTATAGATATTATAGAGC CGTTTTTTCATTTTT SMU.1906c 1790284 - 1790072 - | hypothetical protein TERM 1999 1790439 - 1790414 - g 72 -4.9 -4.70879 | gap 1 CCTAAACGGTAAAAA TGCCAAATTTCT ATT AGAAATT-GACA AATTGACCCTTCCTG SMU.1907 1790364 - 1790495 + | hypothetical protein SMU.1908c 1790853 - 1790689 - | hypothetical protein SMU.1909c 1792032 - 1791628 - | hypothetical protein SMU.1910c 1792598 - 1792179 - | hypothetical protein SMU.1912c 1793568 - 1793413 - | hypothetical protein SMU.1913c 1794380 - 1793979 - | putative immunity protein, BLpL-like TERM 2000 1794329 - 1794317 - G 79 -7.7 -4.25437 | overlap 1794320 AAATTAACAGACAAA CAGCT ATC AGCTG CGCTGTTAAAAGTCT SMU.1914c 1794741 - 1794511 - | hypothetical protein comC 1795008 - 1795148 + | competence stimulating peptide, precursor TERM 2001 1795199 - 1795172 - T 79 -7 -4.6759 | opp_overlap 1795175, overlap 1795175 AACATTGGAATAAAA CAAGGCTGGATT TATT ATTCCAGCCTTT TTAAATGTAAAATAA TERM 2002 1795196 - 1795175 - T 88 -8.7 -4.43909 | opp_overlap 1795175, overlap 1795172 ATTGGAATAAAACAA GGCTGGATT TATT ATTCCAGCC TTTTTAAATGTAAAA TERM 2003 1795175 - 1795196 + T 89 -8.7 -4.70659 | opp_overlap 1795172 1795175 ATTGGAATAAAACAA GGCTGGATT TATT ATTCCAGCC TTTTTAAATGTAAAA comD 1796615 - 1795290 - | putative histidine kinase of the competence regulon, ComD TERM 2004 1795680 - 1795704 + g 70 -8.6 -3.13737 | AGCTTCTAAGATTTT TGCTGACAAG ATACC CTTGACAGCA TCGTTTTGAATATTA comE 1797364 - 1796612 - | putative response regulator of the competence regulon, ComE; response regulator of sakacin A production TERM 2005 1797564 - 1797552 - R 72 -2.7 -5.47399 | CTAACCGCAAAAAAA GAAAA GTT TCTTC TATAAGTATGAACCG dedA 1798474 - 1797836 - | putative membrane-associated protein DedA sapR2 1799147 - 1798521 - | hypothetical protein engA 1800532 - 1799222 - | GTP-binding protein EngA TERM 2006 1800557 - 1800573 + r 93 -9.5 -4.7261 | TTCTTATCTTCTATT TTCACCT TCA AGGTGAA TTTCTTTTGCTAAAT dnaI 1801444 - 1800545 - | primosomal protein DnaI TERM 2007 1801372 - 1801383 + g 75 -2.2 -5.43414 | overlap 1801365 CCTGATCTGATAAAA TGGC TTGA GTCA TTTTTTCTGTATCAT dnaB 1802614 - 1801445 - | putative chromosome replication protein SMU.1923c 1803092 - 1802601 - | transcriptional regulator NrdR TERM 2008 1803282 - 1803253 - R 100 -12.3 -4.86621 | opp_overlap 1803251 1803247 1803254 1803258 1803262, overlap 1803254 ATTTGGAATTAAAAA CTTAAGCAACGGT TAAA ACCGTTGCTTAAT CATTCATTTTAAATG TERM 2009 1803254 - 1803281 + r 100 -15.8 -2.94735 | opp_overlap 1803253 1803254, overlap 1803251 1803247 1803258 1803262 TTTGGAATTAAAAAC TTAAGCAACGGT TAAA ACCGTTGCTTAA TCATTCATTTTAAAT TERM 2010 1803281 - 1803254 - R 100 -15.8 -3.5125 | opp_overlap 1803254 1803251 1803247 1803258 1803262, overlap 1803253 TTTGGAATTAAAAAC TTAAGCAACGGT TAAA ACCGTTGCTTAA TCATTCATTTTAAAT TERM 2011 1803258 - 1803277 + r 90 -12.2 -3.32228 | opp_overlap 1803254 1803253, overlap 1803254 1803251 1803247 1803262 GAATTAAAAACTTAA GCAACGGT TAAA ACCGTTGC TTAATCATTCATTTT gcrR 1804154 - 1803462 - | response regulator GcrR for glucan-binding protein C TERM 2012 1804534 - 1804505 - R 100 -12.4 -5.03405 | AATATCATATAAAAA GAAGGTCTATTT CTCATC AAATAGACCTTC CAAAGCTGCAAAAGG SMU.1925c 1805047 - 1804511 - | hypothetical protein psaR 1805615 - 1805040 - | putative transcriptional regulator TERM 2013 1805633 - 1805647 + H 90 -5.8 -5.5604 | opp_overlap 1805633 TAACCTCTTGCCAAA TAAACA GAA TGTTTA TTTTTTGTTCATTGA TERM 2014 1806327 - 1806348 + G 71 -8.1 -3.41325 | gap 1, opp_overlap 1806327, overlap 1806325 TGACTCATAATTCAA TGATCAAGCC GAT GGCT-GATCA TGTTCTTGAAGTATC TERM 2015 1806348 - 1806327 - g 70 -8.1 -3.24245 | gap 1, opp_overlap 1806327 1806325 TGACTCATAATTCAA TGATCAAGCC GAT GGCT-GATCA TGTTCTTGAAGTATC SMU.1927 1805723 - 1806430 + | putative ABC transporter, ATP-binding protein psaB 1806432 - 1809044 + | putative ABC transporter, permease protein TERM 2016 1809082 - 1809055 - T 100 -11.4 -4.58786 | opp_overlap 1809055 1809059, overlap 1809059 ATTAACAAGAAGAAA CAAACTGGAAGC AATT GTTTCCAGTTTG TTTAACGATAAAGCT TERM 2017 1809055 - 1809082 + T 100 -13.6 -3.57263 | opp_overlap 1809055 1809059, overlap 1809059 ATTAACAAGAAGAAA CAAACTGGAAGC AATT GTTTCCAGTTTG TTTAACGATAAAGCT TERM 2018 1809059 - 1809078 + T 88 -8.6 -4.42806 | opp_overlap 1809055 1809059, overlap 1809055 ACAAGAAGAAACAAA CTGGAAGC AATT GTTTCCAG TTTGTTTAACGATAA TERM 2019 1809078 - 1809059 - T 80 -6.4 -4.79953 | opp_overlap 1809059 1809055, overlap 1809055 ACAAGAAGAAACAAA CTGGAAGC AATT GTTTCCAG TTTGTTTAACGATAA htpX 1810080 - 1809181 - | heat shock protein HtpX TERM 2020 1809707 - 1809723 + g 70 -8.7 -3.05597 | overlap 1809706 GCTAAGAGTCCAGTG GTTGCAG CCA CTGCAGC ATTTTGGGGACTGGA TERM 2021 1810032 - 1810049 + g 72 -4.9 -4.71426 | opp_overlap 1810021 1810032 TAAAGAAAACAATCA GAAGAAC GATT GTTTTTC TTTTATTGCTAGCAA lemA 1810650 - 1810090 - | putative cytoplasmic membrane protein; LemA-like protein gidB 1810738 - 1811451 + | glucose-inhibited division protein B TERM 2022 1811484 - 1811529 + T 75 -5 -4.96646 | gap 2, opp_overlap 1811484 1811485 TTCTTAAATAAAAAG GCTCTAGAATGTCTATAGTGGG ATAA TCCACT-TGGA-ATTATAGAGC TTTTTGATTATATAA SMU.1933c 1812508 - 1811675 - | cobalt permease SMU.1934c 1814177 - 1812501 - | putative cobalt ABC transporter, ATP-binding protein TERM 2023 1812943 - 1812925 - G 76 -10.4 -2.64472 | opp_overlap 1812929, overlap 1812929 1812932 CACTTGCGAAACTCA TAAAGACC GCA GGTCTTTA AAACCTTCAAAACGC SMU.1935c 1814751 - 1814206 - | hypothetical protein TERM 2024 1814469 - 1814430 - G 70 -7.4 -3.78904 | gap 1, opp_overlap 1814429 1814430 TATTAAAGGTAACAA CATCTTTA-GTTGAAAAGA TTC CCTTTTCAACATGAAGACG ATTTCTCAAAAAACC TERM 2025 1814733 - 1814743 + g 73 -2.6 -5.27769 | TTGCGACAACTGCTT TAAT TGA ATTA TTTTTCATTTTTTCT SMU.1936c 1815606 - 1814761 - | hypothetical protein TERM 2026 1815727 - 1815689 - R 89 -11.2 -3.68378 | opp_overlap 1815688 1815692 1815696, overlap 1815687 1815692 1815696 GTAGACTGTAAAAGA GTAGAAACAGCTATAGTT ATT ACCTATAACTGTTTCTTC ATTTAATAAAGTTCC TERM 2027 1815692 - 1815724 + r 80 -9.3 -3.56972 | opp_overlap 1815689 1815687 1815692 1815696, overlap 1815688 1815696 GACTGTAAAAGAGTA GAAACAGCTATAGTT ATT ACCTATAACTGTTTC TTCATTTAATAAAGT TERM 2028 1815724 - 1815692 - R 86 -11.5 -2.94337 | opp_overlap 1815692 1815688 1815696, overlap 1815689 1815687 1815696 GACTGTAAAAGAGTA GAAACAGCTATAGTT ATT ACCTATAACTGTTTC TTCATTTAATAAAGT cnhA 1816506 - 1815730 - | putative carbon-nitrogen hydrolase SMU.1938c 1817263 - 1816574 - | putative ABC transporter, permease protein SMU.1939c 1818329 - 1817265 - | putative ABC transporter, ATP-binding protein SMU.1940c 1819695 - 1818322 - | hypothetical protein TERM 2029 1819100 - 1819082 - G 70 -4.7 -4.5394 | overlap 1819077 ACAGAAAGATTAAAA GTAATAA TACCT TTATTAC CACCTGTAATTTCTA TERM 2030 1819574 - 1819555 - G 78 -10 -3.34894 | opp_overlap 1819554 1819549, overlap 1819553 AATTTCGCCCAAATA GCCTGCAA CATC CTGCAGGC CTATCTGTTGTGCAA TERM 2031 1819866 - 1819837 - R 83 -8 -4.15565 | gap 1, opp_overlap 1819837 1819840, overlap 1819840 GTCATTATCTTAAAA TAAGTCTGGGTAG CTTTT CT-CCCAGACTCA TTGTTATTTGCCTTT TERM 2032 1819863 - 1819840 - R 80 -7.5 -4.20148 | gap 1, opp_overlap 1819840 1819837, overlap 1819837 ATTATCTTAAAATAA GTCTGGGTAG CTTTT CT-CCCAGAC TCATTGTTATTTGCC atmB 1820732 - 1819890 - | putative membrane lipoprotein TERM 2033 1820873 - 1820888 + r 80 -7.6 -4.32651 | opp_overlap 1820873 CTCAATTCCAAAAAA TCAGGT GAAA ACCTGA TTTTAATGAATTATT TERM 2034 1820888 - 1820873 - R 89 -7.6 -5.09426 | opp_overlap 1820873 CTCAATTCCAAAAAA TCAGGT GAAA ACCTGA TTTTAATGAATTATT SMU.1942c 1821702 - 1820899 - | putative amino acid binding protein TERM 2035 1821117 - 1821128 + g 70 -3 -5.03747 | GCTCTTTGATGATCG TTTC TGCT GAAA TTTTTTCAAAAATTT leuS 1824504 - 1822003 - | leucyl-tRNA synthetase TERM 2036 1824847 - 1824835 - H 72 -4.9 -4.83169 | ATCCCTCTACAAAAA TCTTA AGA TAAGA GAATAATGCCATATT SMU.1945 1824905 - 1825669 + | hypothetical protein SMU.1946 1825662 - 1826351 + | hypothetical protein TERM 2037 1826368 - 1826395 + T 82 -4.8 -5.47159 | opp_overlap 1826368 ATATAACATGAAAAA GGTCTCTTGGTA ACAC TATCCCGAGACC TTTTTGTTTCTTCCA nusG 1827104 - 1826568 - | transcription antitermination protein NusG TERM 2038 1827227 - 1827256 + r 70 -8.1 -3.0579 | opp_overlap 1827219 1827234, overlap 1827226 1827249 1827251 AAACAAATTTCTTCA TAAAAAACAGC CTTTTCCA GCTGTTTTTTA CTTTTAAAAACGTTT secE 1827436 - 1827260 - | preprotein translocase subunit SecE TERM 2039 1827424 - 1827438 + g 91 -7.2 -5.31275 | CTGAAAAAACGCCAC CAATGA ATT TCATTG TTTTTTCTCCTAACG pbp2a 1829843 - 1827651 - | putative membrane carboxypeptidase, penicillin-binding protein 2a TERM 2040 1829891 - 1829901 + H 70 -4 -5.06103 | CAATATTTTTATTTG GAAA AAA TTTC TTTTTTAACAGTTCT TERM 2041 1829975 - 1829923 - H 76 -9.6 -3.08639 | opp_overlap 1829923 1829924 AACAGTTCTAATATA CTCATGACCTTATTATATCAATTT TAAAG AAAATGATATAATAAAATCATGAC TTTTACTGTAAAAAT TERM 2042 1829924 - 1829974 + H 78 -9.4 -3.2032 | opp_overlap 1829923, overlap 1829923 ACAGTTCTAATATAC TCATGACCTTATTATATCAATTTT AAA GAAAATGATATAATAAAATCATGA CTTTTACTGTAAAAA TERM 2043 1830199 - 1830188 - g 71 -4.4 -4.71828 | ATCCTATCAAGAAAA TTCC TATG GGAA ACAAGACTTTAATAG SMU.1950 1829971 - 1830837 + | putative pseudouridylate synthase TERM 2044 1830844 - 1830823 - T 76 -9.5 -3.11302 | opp_overlap 1830823, overlap 1830822 GCAACATTTGAAAAG GGACTTCCT AAAT AGGAAATCC TTTTTTTCTGACTTA TERM 2045 1830823 - 1830844 + T 100 -7.3 -5.66684 | opp_overlap 1830823 1830822 GCAACATTTGAAAAG GGACTTCCT AAAT AGGAAATCC TTTTTTTCTGACTTA SMU.1951c 1832560 - 1830857 - | hypothetical protein TERM 2046 1832470 - 1832480 + g 71 -6.8 -4.05788 | TCTTAAGAAGATCTT GCAG CTG CTGC TTTAATTTCCCCACA TERM 2047 1833142 - 1833116 - R 74 -6.6 -4.31164 | TTTAGACAACACAAA GAGAACCTAGCC TTT AACCAGATTCTC TTAAAAATATTAATG groEL 1834832 - 1833204 - | chaperonin GroEL TERM 2048 1834591 - 1834619 + g 81 -10.5 -3.66646 | opp_overlap 1834591, overlap 1834592 TCACCGGCAATATCA TTAGTTTTAGAAG CAA CTTCTGAAACTAG TTTAGCTCCCATATT TERM 2049 1834592 - 1834618 + g 81 -11.8 -2.79505 | opp_overlap 1834591, overlap 1834591 CACCGGCAATATCAT TAGTTTTAGAAG CAA CTTCTGAAACTA GTTTAGCTCCCATAT groES 1835231 - 1834944 - | co-chaperonin GroES TERM 2050 1835325 - 1835342 + r 70 -4.1 -5.11937 | opp_overlap 1835325, overlap 1835327 TAGTCAAGAAAAAAA CCTTACC TTTC GGTAAAG TTTTTTCAGATTATT TERM 2051 1835342 - 1835325 - R 100 -6.3 -5.8187 | opp_overlap 1835325 1835327 TAGTCAAGAAAAAAA CCTTACC TTTC GGTAAAG TTTTTTCAGATTATT SMU.1956c 1835649 - 1835353 - | hypothetical protein SMU.1957 1836509 - 1835673 - | putative PTS system, mannose-specific IID component TERM 2052 1836483 - 1836493 + g 73 -4 -5.07652 | overlap 1836476 AGATTTCGTTAAAGT TTTC TTT GAAA TTTTCTTTTGAGCCA SMU.1958c 1837362 - 1836511 - | putative PTS system, mannose-specific IIC component TERM 2053 1837191 - 1837179 - G 74 -7.7 -3.9693 | GAGCGATGTAAACAA GTTGC ATA GCAAC ACCGCAAACAATACC SMU.1960c 1838230 - 1837736 - | putative PTS system, mannose-specific IIB component SMU.1961c 1838679 - 1838248 - | putative PTS system, sugar-specific enzyme IIA component TERM 2054 1838758 - 1838810 + r 100 -16.7 -5.06451 | opp_overlap 1838775, overlap 1838747 1838764 GTGTCATTTGTCATT TTCATATCCCTGACAAATGTCAT CTGTTGA ATGACATTTGTCAGGGATTTAAA TTTTTTAAACTGATC TERM 2055 1838764 - 1838804 + r 100 -20.1 -4.05875 | opp_overlap 1838775, overlap 1838747 1838758 TTTGTCATTTTCATA TCCCTGACAAATGTCAT CTGTTGA ATGACATTTGTCAGGGA TTTAAATTTTTTAAA TERM 2056 1838902 - 1838864 - R 72 -9 -2.63833 | opp_overlap 1838865 1838873, overlap 1838862 1838873 AAATATAAAGAAACT GCTCAAAAAGTCTGGGAA TTT TTTCCAGACTTTTTGATG TTATTGACAGCAAGT TERM 2057 1838865 - 1838902 + r 100 -14.5 -3.61517 | gap 1, opp_overlap 1838864 1838862 1838873, overlap 1838873 AATATAAAGAAACTG C-TCAAAAAGTCTGGGAA TTT TTTCCAGACTTTTTGATG TTATTGACAGCAAGT TERM 2058 1838873 - 1838893 + r 100 -10.5 -4.93316 | opp_overlap 1838864 1838862 1838873, overlap 1838865 GAAACTGCTCAAAAA GTCTGGGAA TTT TTTCCAGAC TTTTTGATGTTATTG TERM 2059 1838893 - 1838873 - R 85 -8.3 -4.60924 | opp_overlap 1838873 1838865, overlap 1838864 1838862 GAAACTGCTCAAAAA GTCTGGGAA TTT TTTCCAGAC TTTTTGATGTTATTG SMU.1963c 1840289 - 1838982 - | putative sugar-binding periplasmic protein SMU.1964c 1840962 - 1840282 - | putative response regulator SMU.1965c 1842284 - 1840962 - | putative histidine kinase TERM 2060 1841352 - 1841362 + g 71 -8.2 -3.44801 | overlap 1841351 GCTTCCCTTTTCAAG GGCC CCT GGCC TCATTTTTTCTAAAG TERM 2061 1841706 - 1841696 - G 73 -4 -5.0809 | AAGAAATTAGAAAAA CAAT GAT ATTG AGCGAGTAAAGAAAG TERM 2062 1842236 - 1842223 - G 70 -2.5 -5.055 | GTAACTGCCAAAAAA TTAAT AAAA ATTAA AGCCTGCTTAGCATA SMU.1966c 1843246 - 1842284 - | putative periplasmic sugar-binding protein TERM 2063 1843454 - 1843411 - R 84 -6.3 -5.27477 | ATTTGAACTAAAAAA GAATGATTACAGTCCAA AAAATAAAGA TTGAACTATAATCACTC TCTTACTTTAGCTAG ssb2 1844057 - 1843662 - | single-strand DNA-binding protein SMU.1968c 1844500 - 1844144 - | hypothetical protein TERM 2064 1844361 - 1844387 + g 71 -6.6 -4.04318 | overlap 1844377 TTTGCTCCTTTAATT TGCTCTTTCTTA ATC TGAGATGGAGCA TTTCTAATATCTAAC TERM 2065 1844524 - 1844546 + r 80 -5.6 -5.12987 | overlap 1844525 CTCTCCTTTCCTAAT TGCTTTTACC ATC GTTAAAAGCG TTTCTTTTTGTTTAG SMU.1969c 1844931 - 1844500 - | putative transcriptional regulator TERM 2066 1844992 - 1845012 + r 93 -8.3 -5.25803 | opp_overlap 1844992, overlap 1844994 TCCTGCAAGAAAAAA CCTCGTCAT TTC ATGACGAAG TTTTTTCTCACCCTT TERM 2067 1845012 - 1844992 - R 100 -10.5 -5.4505 | opp_overlap 1844992 1844994 TCCTGCAAGAAAAAA CCTCGTCAT TTC ATGACGAAG TTTTTTCTCACCCTT TERM 2068 1844994 - 1845010 + r 75 -9.5 -2.83915 | opp_overlap 1844992, overlap 1844992 CTGCAAGAAAAAACC TCGTCAT TTC ATGACGA AGTTTTTTCTCACCC SMU.1970c 1845646 - 1845020 - | putative phenylalanyl-tRNA synthetase, beta subunit TERM 2069 1845201 - 1845181 - G 72 -5.4 -4.56775 | AGTTGCCTGGAAAAA TGAGGCCA CCGCT TGGCATCA TGGCACCTGGCAGAG SMU.1971c 1845972 - 1845643 - | putative thioredoxin H1 SMU.1972c 1846258 - 1845950 - | hypothetical protein TERM 2070 1847105 - 1847133 + G 73 -4 -5.11063 | GCTTTTACGATCCGG GTCATGTCATG-CT TAA AGACATG-CGTGAC TTTTTGTTGACTACT pepA 1846318 - 1847385 + | putative glutamyl-aminopeptidase; endo-1,4-beta-glucanase TERM 2071 1847430 - 1847396 - f 88 -7.2 -5.05505 | ATTAGAAAGGAAAAA CACAGTCAGATCTATA CTA TTTATCTCTGACTGTG ACATTTGACTATGAA TERM 2072 1848162 - 1848147 - g 77 -6.8 -4.55287 | TTGATCTAGAGAAAA CCGGCT TTAC AGCCAG TACCATTTCAGCCAT proC 1847441 - 1848211 + | pyrroline-5-carboxylate reductase SMU.1975c 1848958 - 1848296 - | hypothetical protein SMU.1976c 1849451 - 1849011 - | hypothetical protein SMU.1977c 1849665 - 1849420 - | putative transcriptional regulator TERM 2073 1850197 - 1850180 - R 80 -5.5 -5.26875 | TCGTCAATCAAAAAA GCTGACC AATT GCTCAGC CAACTTTTCTGGTCT ackA 1851433 - 1850234 - | putative acetate kinase SMU.1979c 1852445 - 1851492 - | hypothetical protein SMU.1980c 1852889 - 1852500 - | hypothetical protein SMU.1981c 1853301 - 1852867 - | hypothetical protein SMU.1982c 1853581 - 1853288 - | hypothetical protein comYD 1853984 - 1853553 - | putative competence protein ComYD comYC 1854258 - 1853944 - | putative competence protein ComYC comYB 1855106 - 1854258 - | ABC transporter ComYB comYA 1856166 - 1855225 - | putative ABC transporter, ATP-binding protein ComYA; late competence gene TERM 2074 1856261 - 1856245 - R 100 -6.6 -6.23317 | ATAAAAAGAAAAAAA CTGAGA ACGAA TCTCAG TCTAAAACGATATAC SMU.1988c 1856679 - 1856296 - | putative DNA binding protein TERM 2075 1856796 - 1856766 - R 100 -9.2 -5.51353 | opp_overlap 1856766 1856769 GAAAAATAAGAAAAA GCATACTTATCTTT TTA AGAGATAAGTATAC TTTTAAATAGTTACT TERM 2076 1856766 - 1856796 + r 88 -9.2 -4.24294 | opp_overlap 1856766, overlap 1856769 GAAAAATAAGAAAAA GCATACTTATCTTT TTA AGAGATAAGTATAC TTTTAAATAGTTACT TERM 2077 1856769 - 1856793 + r 76 -9.5 -3.12324 | opp_overlap 1856766, overlap 1856766 AAATAAGAAAAAGCA TACTTATCTTT TTA AGAGATAAGTA TACTTTTAAATAGTT rpoC 1860463 - 1856807 - | DNA-directed RNA polymerase subunit beta' TERM 2078 1859763 - 1859779 + g 77 -6.6 -4.57073 | TTTAATACCATCCAT TCAGGT TTATT ACCTGA TTTTTGGAAGGCATC rpoB 1864235 - 1860672 - | DNA-directed RNA polymerase subunit beta TERM 2079 1864409 - 1864367 - R 70 -4.2 -5.00765 | overlap 1864369 AATTAAGCATAAAAA GAGCAGCTAAATCGGACTTC ATT AAAGCTTGATTTAACTGCTG TGAGCTTTGTTTGGA TERM 2080 1864407 - 1864369 - R 71 -6.8 -4.11322 | overlap 1864367 TTAAGCATAAAAAGA GCAGCTAAATCGGACTTC ATT AAAGCTTGATTTAACTGC TGTGAGCTTTGTTTG pbp1b 1866850 - 1864496 - | putative membrane carboxypeptidase, penicillin-binding protein 1b TERM 2081 1867100 - 1867090 - g 73 -4 -5.03145 | GAAGCCCTTAAAAAA TCAT TAG ATGA CGGACAAGTTTCTTT tyrS 1867006 - 1868274 + | tyrosyl-tRNA synthetase adcB 1869242 - 1868430 - | putative ABC transporter, zinc permease protein TERM 2082 1869193 - 1869178 - G 76 -2.6 -5.40474 | gap 1 ATTGGTGCAAAAAAA CTGATTG CAA CAA-CAG CCAATAAAGCACGTT adcC 1869942 - 1869232 - | putative ABC transporter, ATP-binding protein SMU.1995c 1870391 - 1869945 - | putative transcriptional regulator TERM 2083 1870477 - 1870458 - R 100 -5.8 -6.87161 | CATAAAAAAAAAAAA GAATCAAT TAAA ATTGACTC TACTCATACGGTTAA TERM 2084 1870922 - 1870912 - R 70 -4 -5.09225 | opp_overlap 1870904, overlap 1870916 AGGGGAGTGAAAAAA TTCA TTT TGAA AAAACCGCAAATCAT ipk 1871874 - 1871026 - | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase TERM 2085 1871177 - 1871199 + g 91 -8.6 -5.03715 | CATTTTATCATACGG CCTTTTATTT TTT GAATAAAAGG TTTTTTAGCAATAGT TERM 2086 1872007 - 1871982 - R 80 -6.2 -4.86621 | opp_overlap 1871982 1871985 ATTTTCAACCAAAAA GAATGGTACA ATCACA TGTTCCATTC TTTCCCTTTTTAACT comX1 1872503 - 1872021 - | putative ComX1, transcriptional regulator of competence-specific genes TERM 2087 1873098 - 1873081 - R 76 -3.4 -5.50313 | GACAAAACTAAAAAA GCACCT AGGTAA AGATGC TTCATTATTTATGAA TERM 2088 1876055 - 1876070 + r 77 -7.6 -3.98114 | overlap 1876048 CTTACTCTCTCTGGC GACTCT TCCC AGAGTC TTCTTCTATTCCCTT TERM 2089 1876112 - 1876131 + r 95 -12.2 -3.62275 | opp_overlap 1876111 1876110 CGCAGTCCTACAACC CCAGAGTG TAAA CACTCTGG TTTGCCCTCCTGCCT TERM 2090 1876448 - 1876470 + r 95 -10.6 -4.30809 | overlap 1876449 GGTTTCTTTTTTGTT TCCCTATAGC TGC GCTATAGGGC TTTTACTAGCTATTC TERM 2091 1876449 - 1876469 + r 100 -14.1 -3.17762 | overlap 1876448 GTTTCTTTTTTGTTT CCCTATAGC TGC GCTATAGGG CTTTTACTAGCTATT SMU.1999c 1879807 - 1878521 - | hypothetical protein TERM 2092 1879515 - 1879534 + g 72 -8 -3.85527 | ATATCCTGAATCTTT TTTGCTTT CCCA AAAGCAAA TTCTATTGTATTATA TERM 2093 1879864 - 1879922 + r 100 -13.7 -4.60487 | gap 1, opp_overlap 1879867, overlap 1879865 1879867 TTGTAAAAAAATCAA -AAAGCGTTTATTTAGGAAATGCTTCTA CTAT TAAAAGTATTTCCTAAATAAACGCTGTC TTTTTCAACATGATG TERM 2094 1879865 - 1879920 + r 100 -18.8 -3.91506 | opp_overlap 1879867, overlap 1879864 1879867 TGTAAAAAAATCAAA AAGCGTTTATTTAGGAAATGCTTCTA CTAT TAAAAGTATTTCCTAAATAAACGCTG TCTTTTTCAACATGA TERM 2095 1879918 - 1879867 - R 100 -21.4 -5.31158 | opp_overlap 1879865 1879864 1879867 TAAAAAAATCAAAAA GCGTTTATTTAGGAAATGCTTCTA CTAT TAAAAGTATTTCCTAAATAAACGC TGTCTTTTTCAACAT TERM 2096 1879867 - 1879918 + r 100 -21.4 -3.54256 | opp_overlap 1879867, overlap 1879865 1879864 TAAAAAAATCAAAAA GCGTTTATTTAGGAAATGCTTCTA CTAT TAAAAGTATTTCCTAAATAAACGC TGTCTTTTTCAACAT TERM 2097 1879973 - 1879936 - R 80 -10.7 -2.73875 | gap 1, overlap 1879933 TCTTTTTCAACATGA TGAGTGTTCCACTAGGAG CCT CTCCTAGTGGTAGAC-CA GAGCTAGACTAAGAA rplQ 1880419 - 1880033 - | 50S ribosomal protein L17 rpoA 1881376 - 1880438 - | DNA-directed RNA polymerase subunit alpha rs11 1881805 - 1881422 - | 30S ribosomal protein S11 TERM 2098 1881793 - 1881805 + g 79 -4.1 -5.48825 | CACGACGTTTACGTG TTGGT TTA GCCAA TTTTTTTACCTCCTA rpsM 1882188 - 1881823 - | 30S ribosomal protein S13 rpmJ 1882324 - 1882208 - | 50S ribosomal protein L36 infA 1882568 - 1882350 - | translation initiation factor IF-1 adk 1883325 - 1882687 - | adenylate kinase secY 1884859 - 1883555 - | preprotein translocase subunit SecY rplO 1885299 - 1884859 - | 50S ribosomal protein L15 TERM 2099 1884920 - 1884939 + g 73 -2.9 -5.32565 | GCAGATTTTGAGAAT TTAGCTG CCTTAA CAGTTAA TTTTTTAGTTAATTC rpmD 1885774 - 1885592 - | 50S ribosomal protein L30 rpsE 1886282 - 1885788 - | 30S ribosomal protein S5 rplR 1886657 - 1886301 - | 50S ribosomal protein L18 TERM 2100 1886598 - 1886629 + g 81 -4.4 -5.38839 | gap 1, opp_overlap 1886594 1886608 AGTTCCAGAGAGTTT TCCG-CGAACACGAC GAT GGCGTTTTTGGCGGA TTTTATTTTTATCTG TERM 2101 1886698 - 1886746 + r 100 -12.1 -4.03611 | opp_overlap 1886695 1886709, overlap 1886701 TTGTCAAATTGACAG GGATGATCTAATAGTGTTTGT AAAATAG ACAAACATTATTAGATCAATC TTATTTACCTGTTTT TERM 2102 1886701 - 1886743 + r 100 -14.6 -2.74231 | opp_overlap 1886695 1886709, overlap 1886698 TCAAATTGACAGGGA TGATCTAATAGTGTTTGT AAAATAG ACAAACATTATTAGATCA ATCTTATTTACCTGT rplF 1887283 - 1886747 - | 50S ribosomal protein L6 rpsH 1888094 - 1887696 - | 30S ribosomal protein S8 TERM 2103 1888242 - 1888268 + r 79 -8.2 -4.11216 | TTCAAAACTTTCTTT GATTGATAAG CTAACCA CTTATCAATC TTTTCACCCTAACAA TERM 2104 1888351 - 1888321 - R 88 -11.4 -3.35798 | overlap 1888333 AGTGCTCACCGATAA GTTTGAAAAAAGCT GAA AACTCTTTTCAAAC TACCAAGAAGCTTTT rpsN 1888536 - 1888351 - | 30S ribosomal protein S14 rplE 1889093 - 1888551 - | 50S ribosomal protein L5 rplX 1889422 - 1889117 - | 50S ribosomal protein L24 rplN 1889956 - 1889588 - | 50S ribosomal protein L14 rpsQ 1890243 - 1889983 - | 30S ribosomal protein S17 TERM 2105 1890282 - 1890304 + r 76 -7.1 -4.34557 | gap 1 TTCTTTCGTTTCTGC TTGCACG-GT TTTA ACACGTGCAA TTTGCTTTTTCACTT rpmC 1890473 - 1890264 - | 50S ribosomal protein L29 rplP 1890896 - 1890483 - | 50S ribosomal protein L16 rpsC 1891553 - 1890900 - | 30S ribosomal protein S3 rplV 1891910 - 1891566 - | 50S ribosomal protein L22 TERM 2106 1891868 - 1891846 - G 75 -9.2 -3.34806 | overlap 1891844 1891838 AGATCAAGCACAAGA CGTGTTTTAC GAG GTGAAACACG GACTGTACGAGCCAT SMU.2023c 1892049 - 1891927 - | 30S ribosomal protein S19 SMU.2024c 1892134 - 1892039 - | 50S ribosomal protein L4 rplC 1892785 - 1892159 - | 50S ribosomal protein L3 SMU.2026c 1893130 - 1893020 - | 30S ribosomal protein S10 TERM 2107 1893641 - 1893612 - H 100 -13.9 -4.2687 | opp_overlap 1893610 1893608 1893619, overlap 1893608 GTTAAAAATGATAAA CTCATAATTAGTT TATA AACTAATTATGAG GAGTATATGTTTTCA TERM 2108 1893697 - 1893672 - g 74 -5.5 -4.78661 | AGTCAAAAATTAAAA GAAAGACGAAA AAAA CTTGGTCTTTC GCAAGCACAAACAGC SMU.2027 1893648 - 1894334 + | putative transcriptional regulator sacB 1896912 - 1894525 - | levansucrase precursor; beta-D-fructosyltransferase TERM 2109 1895470 - 1895480 + g 81 -3.2 -5.61596 | CGTGTAAAATTGATC TACC TCA GGTG TTTTTTTATCGCCCT TERM 2110 1897001 - 1897027 + r 90 -11.2 -3.92694 | TTTTTAGAAACTTTA TTTATGAAAAAA TCG TTTTTTCATAAA TTTCATCTCATTTTC TERM 2111 1897090 - 1897117 + r 83 -4.3 -5.70829 | opp_overlap 1897090 AGCTGAAATTAAAAA TATCTCTTG AACCAAAAAA CAAGAGATA TTTTTTTATAATCTT TERM 2112 1897117 - 1897090 - R 73 -4.3 -4.99134 | opp_overlap 1897090 AGCTGAAATTAAAAA TATCTCTTG AACCAAAAAA CAAGAGATA TTTTTTTATAATCTT clpC 1899640 - 1897199 - | class III stress response-related ATP-dependent Clp protease, ATP-binding subunit TERM 2113 1897791 - 1897805 + g 71 -6.4 -4.1899 | opp_overlap 1897791 AGAAGAACAGAGTAA GGTTTG TTA CGAACC TTTTCCGTCAACTCA ctsR 1900101 - 1899637 - | putative transcriptional regulator CtsR tsf 1901428 - 1900382 - | elongation factor Ts TERM 2114 1901456 - 1901475 + r 87 -10 -3.8374 | gap 1, opp_overlap 1901456, overlap 1901456 AAATTTTAATAAAAA GGG-AGGGC TTA GCCCTGCCC TTTAGGATTTTTTCA TERM 2115 1901456 - 1901474 + r 79 -10.2 -2.8916 | opp_overlap 1901456, overlap 1901456 AAATTTTAATAAAAA GGGAGGGC TTA GCCCTGCC CTTTAGGATTTTTTC TERM 2116 1901474 - 1901456 - R 100 -10.2 -5.11112 | opp_overlap 1901456 1901456 AAATTTTAATAAAAA GGGAGGGC TTA GCCCTGCC CTTTAGGATTTTTTC rpsB 1902280 - 1901495 - | 30S ribosomal protein S2 TERM 2117 1902045 - 1902055 + g 72 -5.4 -4.67552 | GCCTCTTCTTTAATC GCTT CAG AAGC TTGTTTTTTCGTACC TERM 2118 1902248 - 1902283 + g 70 -7 -3.71907 | gap 1 AAAGTGCACACCAGC CTCGAGG-AGTTGTTTC ATT GAAATAACTGCCATGAG TATTTCTCCTTTTTA SMU.2033c 1904324 - 1902471 - | hypothetical protein TERM 2119 1902602 - 1902639 + g 79 -5.9 -4.87273 | gap 1, opp_overlap 1902605, overlap 1902600 1902605 1902628 TAGGAAGCCAAGCTA GA-ATTTCTATAGTGTAT CCA ATACACTGTACAAATGTC TTTTTGTAAGCTATT TERM 2120 1902605 - 1902635 + g 70 -7.8 -3.61001 | opp_overlap 1902605, overlap 1902600 1902602 1902628 GAAGCCAAGCTAGAA TTTCTATAGTGTAT CCA ATACACTGTACAAA TGTCTTTTTGTAAGC TERM 2121 1904685 - 1904705 + H 100 -7.6 -5.36441 | opp_overlap 1904685 GCCTTTTGTAAAAAA TCTCCTAG CCCAA CTAGGGGA TTTTTTGTATCGAAA TERM 2122 1904705 - 1904685 - H 82 -6.1 -5.00616 | opp_overlap 1904685 GCCTTTTGTAAAAAA TCTCCTAGC CCA ACTAGGGGA TTTTTTGTATCGAAA SMU.2035 1905118 - 1906074 + | bacteriocin immunity protein TERM 2123 1906126 - 1906159 + T 78 -6.9 -4.39407 | opp_overlap 1906131, overlap 1906131 TTATCTAGTCAATGA AAAAACGCTTGAA TTAAAATT TTCAAGCGTTTTA TTTTAGATTGTTTAA TERM 2124 1906131 - 1906154 + T 88 -6.8 -5.13343 | opp_overlap 1906131, overlap 1906126 TAGTCAATGAAAAAA CGCTTGAA TTAAAATT TTCAAGCG TTTTATTTTAGATTG TERM 2125 1906154 - 1906131 - T 88 -6.8 -5.28481 | opp_overlap 1906131 1906126 TAGTCAATGAAAAAA CGCTTGAA TTAAAATT TTCAAGCG TTTTATTTTAGATTG pepO 1908114 - 1906219 - | putative peptidase treA 1910251 - 1908623 - | putative trehalose-6-phosphate hydrolase TreA pttB 1912244 - 1910277 - | putative PTS system, trehalose-specific IIABC component TERM 2126 1911686 - 1911658 - G 73 -6.9 -4.05788 | TGCGGTGAAACCAAA CAAATTCCAAGTA CAA TACCTAAAATTTG ACTCGTTCCCATCTT treR 1912418 - 1913131 + | putative transcriptional regulator; repressor of the trehalose operon TERM 2127 1913427 - 1913406 - T 100 -11.7 -4.70659 | opp_overlap 1913406 TGTGATATGCAAAAA CCTCAGATA CAAT TATCTGAGG TTTCTTGTCACATAA TERM 2128 1913406 - 1913427 + T 100 -11.7 -4.32177 | opp_overlap 1913406 TGTGATATGCAAAAA CCTCAGATA CAAT TATCTGAGG TTTCTTGTCACATAA dexA 1916029 - 1913477 - | dextranase precursor TERM 2129 1914427 - 1914447 + g 72 -8.9 -3.28712 | ACATGTGATATCCTC CTGCTGCCG CAA TGGCCGCAG TTGTCAGCAGAACCG SMU.2043c 1916960 - 1916514 - | D-tyrosyl-tRNA deacylase TERM 2130 1916613 - 1916592 - G 75 -8.1 -3.73414 | overlap 1916594 CATATCAGAGCCAAA TATTCCTGT TTGA ACAGGAACA AACTGAGCTAGCTCT TERM 2131 1916611 - 1916594 - G 71 -8.5 -3.44487 | overlap 1916592 TATCAGAGCCAAATA TTCCTGT TTGA ACAGGAA CAAACTGAGCTAGCT relA 1919189 - 1916967 - | putative stringent response protein, ppGpp synthetase SMU.2046c 1920158 - 1919337 - | hypothetical protein ptsG 1922438 - 1920249 - | putative PTS system, glucose-specific IIABC component TERM 2132 1922467 - 1922480 + H 71 -5.3 -4.60977 | CAAACATCTTTTTCA TGCAA ACGT TTGCA TTTTATGGTTCTATT SMU.2048 1922836 - 1922988 + | hypothetical protein SMU.2049c 1924020 - 1923277 - | hypothetical protein TERM 2133 1923554 - 1923568 + g 71 -4.2 -4.83169 | opp_overlap 1923554 1923562 AATACGGCCAACTGA GTCAGA AAG TCAGAC TTTTTCTCAAAAAAT prmA 1924974 - 1924021 - | ribosomal protein L11 methyltransferase SMU.2052c 1925417 - 1925202 - | hypothetical protein TERM 2134 1925302 - 1925287 - G 70 -7.6 -3.59481 | overlap 1925285 AAGAAGCTACAAAGA GTTCCA ATGT TGGAAC CAATTGCTGTTCCTG SMU.2053c 1925499 - 1925407 - | hypothetical protein SMU.2054c 1925982 - 1925512 - | hypothetical protein TERM 2135 1926258 - 1926272 + GH 79 -4.2 -5.30155 | AATCATTCAGAAGTT TGAGAG CAA CACTCA TTTTTTAGTTGCTAA SMU.2055 1926130 - 1926621 + | putative acetyltransferase TERM 2136 1927720 - 1927706 - gT 90 -10 -4.00042 | opp_overlap 1927705 1927704 GCTGGCAGTAAAGAA TTGGGC AAT GCCCAA GATTATCTCTACCCG SMU.2056 1926593 - 1927876 + | recombination factor protein RarA TERM 2137 1928254 - 1928227 - T 100 -10 -5.96219 | opp_overlap 1928227 1928233 TAGCTATAAAAAAAA GAAAAAGCCC CTCAGTGT GGGCTTTTTC TTTTTAAAATGCGTT TERM 2138 1928227 - 1928254 + T 93 -10 -4.63184 | opp_overlap 1928227, overlap 1928233 TAGCTATAAAAAAAA GAAAAAGCCC CTCAGTGT GGGCTTTTTC TTTTTAAAATGCGTT TERM 2139 1928233 - 1928248 + T 77 -3.2 -5.61881 | opp_overlap 1928227, overlap 1928227 TAAAAAAAAGAAAAA GCCC CTCAGTGT GGGC TTTTTCTTTTTAAAA SMU.2057c 1930142 - 1928283 - | putative cadmium-transporting ATPase; P-type ATPase TERM 2140 1928644 - 1928657 + g 72 -2.4 -5.18726 | TGACTTTGATATTTC GCAA TGATTT TTGC TTTTTGTTCTGGCAA TERM 2141 1929216 - 1929198 - G 70 -7.4 -3.72576 | opp_overlap 1929197 CCCTGTTTTATCAAA GGCAATCA TTT TGATAGCC GTTAAATCAGAAAGG SMU.2058 1930297 - 1931091 + | putative transcriptional regulator SMU.2059c 1932301 - 1931276 - | putative integral membrane protein TERM 2142 1931478 - 1931464 - G 71 -4.3 -4.69656 | AAGGAGTGAAGAAAA TAGGA TTGAC TCCTA AAGCTGTTAAAATAG SMU.2060 1932406 - 1933281 + | LysR family transcriptional regulator SMU.2061 1933350 - 1934003 + | hypothetical protein TERM 2143 1934166 - 1934203 + T 89 -8.6 -4.6759 | opp_overlap 1934167 1934171, overlap 1934167 AAAGTCGCATAAATA ATAAACAGACCTGAAA AAATCA TCTCAGGTCTGTTTAA TTTTCTTACAATCTT TERM 2144 1934202 - 1934167 - T 100 -14.3 -4.07535 | opp_overlap 1934167 1934166, overlap 1934171 AAGTCGCATAAATAA TAAACAGACCTGAAA AAATCA TCTCAGGTCTGTTTA ATTTTCTTACAATCT TERM 2145 1934167 - 1934202 + T 91 -12.1 -3.39469 | opp_overlap 1934167 1934171, overlap 1934166 AAGTCGCATAAATAA TAAACAGACCTGAAA AAATCA TCTCAGGTCTGTTTA ATTTTCTTACAATCT TERM 2146 1934198 - 1934171 - T 95 -10.7 -4.63048 | opp_overlap 1934167 1934166, overlap 1934167 CGCATAAATAATAAA CAGACCTGAAA AAATCA TCTCAGGTCTG TTTAATTTTCTTACA hemH 1935168 - 1934209 - | ferrochelatase TERM 2147 1934540 - 1934503 - G 74 -8.6 -3.48276 | opp_overlap 1934529 TTGCTCCTCAGATAA GCCAGCAG-CAACCGCAA TTAA TTG-AGCTGTCTGCTGGC AGTGCTCTGTATAAT TERM 2148 1934613 - 1934602 - G 80 -5.8 -5.13722 | opp_overlap 1934602 1934601 GCCATGAAAAGAAAA GAGC AGGT GCTC ATTTTCCTGTAAGTG TERM 2149 1934857 - 1934843 - G 76 -8.6 -3.83347 | ACATCTGAAATAGAA GGCTTA CTG TAAGCC ATAGTAGCTCTAACT TERM 2150 1934903 - 1934913 + g 71 -3.2 -5.06816 | CTCTGATCAAAATGA GCTT GTA GAGC TTTTTCTTGACCAAT SMU.2064c 1938042 - 1935244 - | putative transmembrane protein TERM 2151 1936239 - 1936229 - G 73 -8.2 -3.56836 | AAAGCATCTGTTAAA GGCG TAC CGCC AACATACATGGAAAT TERM 2152 1937143 - 1937130 - G 79 -2.3 -5.62045 | overlap 1937131 AGAGAGAATAAAAAA CCGGC AAAA GCCAA ATCGCACTCAAACCT TERM 2153 1937181 - 1937202 + g 71 -8.1 -3.53012 | gap 1, opp_overlap 1937181 1937186 1937187 1937194, overlap 1937187 1937194 1937196 AAAGAGAATAGATTA GCAAACGCAG CAA CTGC-TTTGC TTTAAAAAGAAAAGC TERM 2154 1937187 - 1937197 + g 71 -6.8 -4.05788 | opp_overlap 1937187 1937186 1937181 1937194, overlap 1937181 1937194 1937196 AATAGATTAGCAAAC GCAG CAA CTGC TTTGCTTTAAAAAGA TERM 2155 1937552 - 1937537 - G 74 -4.7 -4.98436 | CTAAGACCAGAAAAA CCTTG GCGCAG CAAGG TTACCAGAAAAACTG TERM 2156 1938169 - 1938131 - R 72 -6 -4.50976 | opp_overlap 1938131 CTGTATATCATAAAA TCGGGATAGCTACCGATA AAT CAGCATTACCTATCCCGA CTTTTTTACTCTCTA SMU.2065 1939191 - 1938175 - | putative UDP-glucose 4-epimerase SMU.2066c 1942150 - 1939226 - | putative transmembrane protein csbB 1943106 - 1942147 - | putative stress response protein; glycosyltransferase involved in cell wall biogenesis SMU.2069 1943713 - 1944507 + | zinc transporter ZupT TERM 2157 1944591 - 1944570 - g 79 -5.2 -5.18866 | GCTAAAGAAATAAAA GAGGATAA CAAGCC TTATCCCC AGCACTTATCTCAGA TERM 2158 1944746 - 1944725 - g 83 -5.7 -5.47431 | opp_overlap 1944724 1944726, overlap 1944726 GCAAGACATAAAAAA CGGGGAGGC TCTT GCCTACCCT GCTCTCTACTTATTT TERM 2159 1944726 - 1944745 + G 72 -9.2 -2.74182 | opp_overlap 1944725 1944726, overlap 1944724 CAAGACATAAAAAAC GGGGAGGC TCTT GCCTACCC TGCTCTCTACTTATT TERM 2160 1944745 - 1944726 - g 79 -9.2 -3.86832 | opp_overlap 1944726 1944724, overlap 1944725 CAAGACATAAAAAAC GGGGAGGC TCTT GCCTACCC TGCTCTCTACTTATT SMU.2070 1944534 - 1945262 + | hypothetical protein SMU.2071 1945953 - 1945348 - | putative anaerobic ribonucleotide reductase activating protein SMU.2072c 1946470 - 1945913 - | acetyltransferase SMU.2073c 1946635 - 1946504 - | hypothetical protein TERM 2161 1946693 - 1946671 - R 93 -9.9 -4.59081 | opp_overlap 1946671 GAAAGTGAGATAAAA GTCCAGTTG AAATG CAACCGGAC TTCGCTTCAAAAGAT nrdD 1948936 - 1946732 - | anaerobic ribonucleoside triphosphate reductase TERM 2162 1949026 - 1948984 - R 100 -6 -6.08342 | gap 1, opp_overlap 1948988 CAAGAAAGAAAAAAA TCAATATATTGTG-GTAAA AAAAAA TTTAGACACAATATATTGA TATAAAACCTATTTT SMU.2075c 1950606 - 1949035 - | hypothetical protein TERM 2163 1950092 - 1950076 - G 73 -8.1 -3.68071 | CAAACCTGCAAAATA TTTGGTT AAA AACCAAA GGGACAAGAACACAA TERM 2164 1950449 - 1950439 - G 72 -2.4 -5.25656 | AAAATCAGTAAAAAA GGGC ATG GCCA CACTAAAAAAACTGA SMU.2076c 1950771 - 1950643 - | hypothetical protein TERM 2165 1950832 - 1950818 - R 93 -6.4 -5.63236 | opp_overlap 1950818 AGGCAAAAAGAAAAA GCCTGA TCA TCAGAC ATTTCTATCAATCTT SMU.2077c 1951139 - 1950840 - | hypothetical protein SMU.2078c 1951639 - 1951220 - | Holliday junction resolvase-like protein SMU.2079c 1951905 - 1951636 - | hypothetical protein SMU.2080 1952073 - 1952507 + | hypothetical protein TERM 2166 1952625 - 1952638 + G 79 -6.7 -4.70613 | opp_overlap 1952625 CCAAATAGTAATCCA CTTGG TGTC CCAAG TTTTGTTCAACTTTT TERM 2167 1952844 - 1952856 + G 89 -4.1 -5.74086 | TGGTTTTACATGACT CGGAA ATA TTTCG TTTTTTCTTTCCTTT SMU.2081 1952520 - 1952966 + | hypothetical protein SMU.2083c 1953721 - 1953296 - | hypothetical protein spxA 1954370 - 1953972 - | transcriptional regulator Spx TERM 2168 1954432 - 1954447 + r 74 -3.2 -5.37171 | opp_overlap 1954432, overlap 1954434 TTATTAAATAAAGAG TCGGTC TTGG GACCTA TTTTTATTTAATCTT recA 1955606 - 1954455 - | recombinase A TERM 2169 1955308 - 1955296 - G 72 -6.9 -3.95584 | opp_overlap 1955292 TCTGCATCAATGAAA GCGGC AAT ACCGC CATCTTTTTGCGCCT cinA 1956902 - 1955646 - | competence damage-inducible protein A TERM 2170 1956367 - 1956357 - G 75 -3.2 -5.28683 | overlap 1956358 ACCAATACCAAAAAA GCGT AAC ACAC GAGAATAAAGCTTCT TERM 2171 1956378 - 1956388 + g 74 -5.4 -4.7497 | opp_overlap 1956367 1956378 CACACGAGAATAAAG CTTC TCA GAAG TTTTTGATAAATAAG TERM 2172 1956956 - 1956978 + r 80 -7.8 -4.15565 | opp_overlap 1956956 1956957, overlap 1956957 ATATTATAGCACAAA TTCCTCTAAA TTT TTTAGAGGGG TTTTCAAATAATGGA TERM 2173 1956957 - 1956977 + r 74 -9.1 -3.09018 | opp_overlap 1956956 1956957, overlap 1956956 TATTATAGCACAAAT TCCTCTAAA TTT TTTAGAGGG GTTTTCAAATAATGG tagI 1957611 - 1957051 - | putative 3-methyl-adenine DNA glycosylase I ruvA 1958286 - 1957693 - | Holliday junction DNA helicase motor protein TERM 2174 1958127 - 1958112 - G 70 -6.2 -4.22407 | overlap 1958105 TATGAAAACCATAAA GAAGAT GGGC ATCTTC ACGGACAACATGGTG mutL 1960424 - 1958469 - | DNA mismatch repair protein TERM 2175 1959367 - 1959378 + g 73 -3 -5.20331 | TTAAGAGGAAGCTGT GTTT GTTC AAAC TTTTGTTTCTTGTTT TERM 2176 1960492 - 1960469 - R 76 -6.1 -4.63479 | opp_overlap 1960467 1960469 TACCATAAATTAAAA GAGCAATCT TAATTG AGATTACTC TGTTTGTGTCAAGTT SMU.2090c 1960888 - 1960736 - | hypothetical protein SMU.2091c 1963471 - 1960922 - | DNA mismatch repair protein TERM 2177 1961308 - 1961284 - G 85 -11.6 -3.39803 | opp_overlap 1961277 1961286, overlap 1961298 CATGTACATTGACAA GACTTGTCAA TCTAG TTGACAAGTC TGTCAACTCATGATA TERM 2178 1961586 - 1961572 - G 74 -10 -2.80589 | overlap 1961571 1961574 CAAAAATCGGCAAAT CAGCTG AAT CAGCTG CTACAAAAGAACCTA TERM 2179 1963436 - 1963404 - G 76 -2.9 -5.46698 | gap 1 CGGAAAAGCAAAAAA GCATCTGGATAGTC TTTTTT GA-TATCCAAATAC TGCTGCATTCCTGGA SMU.2092c 1963811 - 1963464 - | hypothetical protein argR 1964245 - 1963808 - | putative transcriptional regulator of arginine metabolism SMU.2094c 1965165 - 1964668 - | hypothetical protein SMU.2096c 1965864 - 1965640 - | hypothetical protein SMU.2097 1966306 - 1966542 + | hypothetical protein TERM 2180 1966685 - 1966707 + G 70 -7.1 -3.78629 | gap 1, opp_overlap 1966676 1966683, overlap 1966676 1966685 1966683 GAAATTGCAGCAATC GTT-CCTGCT TTAG AGCAGGAAAC TATTTTAAATTTACT TERM 2181 1968044 - 1968032 - g 80 -7.7 -4.38712 | TCTATCCTTAGAAAA GCTGA TTT TCAGC CTCAGGCAACAGAAA argS 1966643 - 1968334 + | arginyl-tRNA synthetase TERM 2182 1968375 - 1968344 - T 100 -17.6 -3.57239 | opp_overlap 1968344, overlap 1968347 ATGTAAACATTATAA TAAGCTGTTGGAAT ACAT ATTCCAACAGCTTA TTTTTTCTATCTATA TERM 2183 1968344 - 1968375 + T 100 -17.6 -5.4492 | opp_overlap 1968344 1968347 ATGTAAACATTATAA TAAGCTGTTGGAAT ACAT ATTCCAACAGCTTA TTTTTTCTATCTATA TERM 2184 1968372 - 1968347 - T 100 -14.9 -3.90897 | opp_overlap 1968344, overlap 1968344 TAAACATTATAATAA GCTGTTGGAAT ACAT ATTCCAACAGC TTATTTTTTCTATCT SMU.2099c 1969260 - 1968382 - | hypothetical protein TERM 2185 1968794 - 1968780 - G 72 -2.2 -5.2291 | AGAGCATAACAAAAA TATCAA AAA TTAATA AAGCCTGACCCAATT SMU.2100c 1970229 - 1969291 - | hypothetical protein aspS 1971985 - 1970216 - | aspartyl-tRNA synthetase TERM 2186 1972152 - 1972117 - R 77 -4.1 -5.48213 | CAGCTAAAATAAAAA CTCTTAAAAATACTG ACACAA CAGCAAGTTTAAGAG TTTATCAACATTATA hisS 1973505 - 1972216 - | histidyl-tRNA synthetase TERM 2187 1975180 - 1975164 - g 85 -5.1 -5.54907 | opp_overlap 1975179, overlap 1975166 TCCACAAAATAAAAA GTCACTA CAA TAGTGTC GCAGAGCAGCTGCGT SMU.2104 1973798 - 1975642 + | integral membrane protein TERM 2188 1975731 - 1975744 + F 83 -8.1 -4.2074 | opp_overlap 1975731 1975730 1975728 CCAAAAAATGAATAC GGGCT AAAA AGCCC TTTATATCTTACGGA rpmF 1975771 - 1975953 + | 50S ribosomal protein L32 SMU.2105 1976160 - 1976285 + | hypothetical protein TERM 2189 1976307 - 1976278 - T 71 -2.2 -5.39681 | opp_overlap 1976279, overlap 1976267 1976279 ATAATCAAATAAAAA CGCTCTAGTC AAACCATAAA AACTAGAGCA TTTTTTATTGATTAA SMU.2106c 1976650 - 1976393 - | transcription regulator SMU.2107c 1976941 - 1976672 - | hypothetical protein TERM 2190 1976895 - 1976871 - G 71 -3.5 -5.02074 | overlap 1976875 CTAGCTTTTAAAAAA GCAATCTCACT TTG AGTGAGAAAAC GATTAGCTGATAAAA TERM 2191 1976891 - 1976875 - G 81 -9.5 -3.93166 | overlap 1976871 CTTTTAAAAAAGCAA TCTCACT TTG AGTGAGA AAACGATTAGCTGAT SMU.2108c 1978064 - 1976967 - | putative transcriptional regulator SMU.2109 1978141 - 1979520 + | putative MDR permease; multidrug efflux pump TERM 2192 1979524 - 1979552 + T 95 -9 -5.11937 | opp_overlap 1979524 AAAACAAAATAAAAA GGATTTCAGC ATAAATTCA GCTGAAATCC TTTTTTAAAATTATT TERM 2193 1979552 - 1979524 - T 100 -9 -5.70761 | opp_overlap 1979524 AAAACAAAATAAAAA GGATTTCAGC ATAAATTCA GCTGAAATCC TTTTTTAAAATTATT SMU.2111c 1980060 - 1979644 - | hypothetical protein TERM 2194 1980208 - 1980185 - R 80 -6 -5.09426 | opp_overlap 1980185 TTTAAGGCGAAAAAA CGAACAGAGT ATGA AATCTGCTCG TTTTTGTGTGCCATG TERM 2195 1980185 - 1980208 + r 70 -3.8 -4.9792 | opp_overlap 1980185 TTTAAGGCGAAAAAA CGAACAGAGT ATGA AATCTGCTCG TTTTTGTGTGCCATG gbpA 1981932 - 1980235 - | glucan-binding protein A, GbpA SMU.2113c 1982631 - 1982086 - | hypothetical protein TERM 2196 1982355 - 1982382 + g 82 -9.2 -4.08692 | opp_overlap 1982354 TCCAAAAGATCAAGG GCAGCTTTATCT TAGA AGAAAAGGCTGC TTTTAAAGGAACTTC SMU.2114c 1983071 - 1982697 - | putative transcriptional regulator TERM 2197 1983703 - 1983690 - g 71 -6.7 -4.07885 | CACTGTCCTTTAAAA GCCAA AGTT TTGGC TCCTGCTGCAACAAA SMU.2115 1983150 - 1983905 + | putative short-chain dehydrogenase opuCa 1984357 - 1985508 + | putative osmoprotectant amino acid ABC transporter, ATP-binding protein TERM 2198 1985899 - 1985919 + G 100 -14.1 -3.2375 | overlap 1985895 AGCTTCCTTTGGCAG TCCCTGTCA TAA TGACAGGGA TTAGATTATCAGCTA opuCb 1985505 - 1986137 + | putative osmoprotectant ABC transporter; permease protein TERM 2199 1986539 - 1986527 - g 72 -7.7 -3.73072 | opp_overlap 1986527 AACGCTTTGACCAAA CTTGG TTC CCAAG TTATGGCTTCGCTGA TERM 2200 1986660 - 1986627 - g 84 -8.9 -4.42386 | opp_overlap 1986650, overlap 1986629 TTCCGATTTACAAAA GATATCAACAACAGC TAAA GCCGGTGTTGATAGC ACTTGGATGAAACGT TERM 2201 1986658 - 1986629 - g 81 -10.1 -3.82117 | opp_overlap 1986650, overlap 1986627 CCGATTTACAAAAGA TATCAACAACAGC TAAA GCCGGTGTTGATA GCACTTGGATGAAAC opuCc 1986139 - 1987074 + | putative ABC transporter; osmoprotectant-binding protein, glycine betaine/carnitine/choline ABC transporter opuCd 1987083 - 1987739 + | putative osmoprotectant ABC transporter; permease protein TERM 2202 1987781 - 1987756 - T 79 -4.7 -5.27779 | opp_overlap 1987756 1987757, overlap 1987757 1987774 TGGAATACTAAAAAA CCTTCTGTCTC TTAA AAGGCAGAAGA TTTTTGCAGGCAATT TERM 2203 1987835 - 1987856 + T 71 -2.3 -5.51402 | TATTAAGATTTCCAA GTCTCTT TGTCCGTT AAGAGGC TTTTTTTAGCTATCT SMU.2120c 1988400 - 1987822 - | putative 3-methyladenine DNA glycosylase SMU.2121c 1988713 - 1988426 - | hypothetical protein SMU.2123 1988917 - 1989540 + | hypothetical protein SMU.2124 1989375 - 1989572 + | hypothetical protein SMU.2125 1989622 - 1989906 + | hypothetical protein SMU.2126c 1990697 - 1989936 - | putative purine-nucleoside phosphorylase SMU.2127 1990883 - 1992259 + | putative succinate semialdehyde dehydrogenase TERM 2204 1992287 - 1992315 + F 89 -9 -4.39287 | GTTTTAAGCTGTTAA TCTCTTAGATTC AATCA GAGTCTAGGAGA TTTTGCTATCATTGA TERM 2205 1992504 - 1992487 - g 81 -3.5 -5.64274 | overlap 1992488 1992495 TGACTGACAAAAAAA CTCTTAA AGAC TTAAGAA ATCGTAGTTCTGTTT SMU.2128 1992471 - 1994186 + | dihydroxy-acid dehydratase TERM 2206 1994224 - 1994259 + T 88 -6.4 -5.33026 | opp_overlap 1994231, overlap 1994226 TTGAATCAGTATTTG AATTAAAGAAAAGATT AAAC ACTCTTTTCTTTAATC TTTTTCTTTCGCTTG TERM 2207 1994226 - 1994257 + T 88 -9 -4.2793 | opp_overlap 1994231, overlap 1994224 GAATCAGTATTTGAA TTAAAGAAAAGATT AAAC ACTCTTTTCTTTAA TCTTTTTCTTTCGCT TERM 2208 1994334 - 1994281 - T 74 -6.4 -4.36914 | gap 1, opp_overlap 1994287 1994305 1994306 TTTCGCTTGATAAAA TAAAAACTCTCAAAAAAACAGTTAT TGCAT ATTGCAGTTTTT-TGAGAGTTTTTA TTTATTATTTAGGGC TERM 2209 1994287 - 1994328 + T 77 -3.2 -5.52807 | gap 1, opp_overlap 1994281, overlap 1994305 1994306 TTGATAAAATAAAAA CTCTCAAAAAAACAGTTAT TGCAT ATTGCAGTTT-TTTGAGAG TTTTTATTTATTATT TERM 2210 1994305 - 1994317 + T 70 -4.1 -5.08011 | opp_overlap 1994281, overlap 1994287 1994306 TCAAAAAAACAGTTA TTGCA TAT TGCAG TTTTTTGAGAGTTTT SMU.2129c 1994680 - 1994339 - | hypothetical protein SMU.2130 1994869 - 1995813 + | hypothetical protein TERM 2211 1995971 - 1995924 - g 100 -7.9 -5.41941 | gap 1 GAAACGAAAGAAAAA GTCCTATCATCTCTGCAGTAGA TATTG CCTACTATGGAGATGA-AGGAC TCCAATAAAACAAAA SMU.2131 1995815 - 1995979 + | hypothetical protein SMU.2133c 1998508 - 1996004 - | hypothetical protein TERM 2212 1996635 - 1996684 + g 85 -11.7 -3.57561 | overlap 1996600 1996636 1996638 AAAGTCTTAGCATTA TCATTGTCAACTGCTACTAATGA TAAT TTATTTTTAGCAGTTGACAATGC TTTCGACAGTTCACC TERM 2213 1996636 - 1996683 + g 100 -15.2 -2.74322 | overlap 1996600 1996635 1996638 AAGTCTTAGCATTAT CATTGTCAACTGCTACTAATGA TAAT TTATTTTTAGCAGTTGACAATG CTTTCGACAGTTCAC TERM 2214 1996638 - 1996681 + g 87 -12 -2.9162 | overlap 1996636 1996635 GTCTTAGCATTATCA TTGTCAACTGCTACTAATGA TAAT TTATTTTTAGCAGTTGACAA TGCTTTCGACAGTTC SMU.2134 1998640 - 1999194 + | putative transcriptional regulator TERM 2215 1999214 - 1999200 - T 100 -8.6 -5.53991 | opp_overlap 1999200 GATGCATTAAAAAAA GCCATT TGA AATGGC TTTTTGAATAAAATA TERM 2216 1999200 - 1999214 + T 89 -8.6 -4.66609 | opp_overlap 1999200 GATGCATTAAAAAAA GCCATT TGA AATGGC TTTTTGAATAAAATA rpsD 1999847 - 1999236 - | 30S ribosomal protein S4 SMU.2136c 2000127 - 1999951 - | hypothetical protein TERM 2217 2000038 - 2000025 - G 89 -6.7 -5.47431 | overlap 2000027 GTAACATAGAAAAAA GGCTT TGTA AAGCC AAACTTTTCATAGGA SMU.2137c 2000419 - 2000147 - | hypothetical protein dnaC 2001797 - 2000433 - | replicative DNA helicase TERM 2218 2000505 - 2000520 + g 81 -4.6 -5.41143 | TAATTTTACTGTTCC TCGAGC ACCA GCACGA TTTTTTTCCAAGATA rplI 2002270 - 2001818 - | 50S ribosomal protein L9 TERM 2219 2002151 - 2002169 + g 75 -3.1 -5.1963 | overlap 2002153 ATTAATAGCTTGTTT TGTGGCT TCCTT AGCCAAA TTTTTCTTGATTAAA SMU.2140c 2004245 - 2002272 - | hypothetical protein gidA 2006220 - 2004325 - | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA TERM 2220 2004489 - 2004507 + g 70 -2.5 -5.13741 | gap 1 CAATGGCATCCCAAT CGATATTC TTAG GAAT-TCG TTTTTCTTCCATTCG TERM 2221 2005857 - 2005833 - G 75 -6.5 -4.41494 | CATCTTCAACCAAAA TTTCATCAATC ATA GATTGACGTAA GGTTAAGTTTTCCTG TERM 2222 2006301 - 2006243 - R 88 -6.9 -5.19879 | gap 1, opp_overlap 2006262, overlap 2006245 2006252 TCCCAAACACAAAAA TAGCCAAAACCCTCGAAAATTGTGGGTC AAAA GACCAACAATTCTCATGAGCTTTGACC- ATCATGATTATTGTT TERM 2223 2006300 - 2006245 - R 100 -14.2 -4.22132 | opp_overlap 2006262, overlap 2006243 2006252 CCAAACACAAAAATA GCCAAAACCCTCGAAAATTGTGGGTC AAAA GACCAACAATTCTCATGAGCTTTGAC CATCATGATTATTGT TERM 2224 2006293 - 2006252 - R 91 -9.5 -4.37991 | opp_overlap 2006262, overlap 2006245 2006243 CAAAAATAGCCAAAA CCCTCGAAAATTGTGGGTC AAAA GACCAACAATTCTCATGAG CTTTGACCATCATGA rpiB 2006979 - 2006347 - | hypothetical protein trmU 2008162 - 2007041 - | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase TERM 2225 2008504 - 2008464 - R 72 -4.7 -4.79955 | opp_overlap 2008475 ATATTCATAAGAAAA GCACCCCATCCGTTAGA TTTTATG TCTAACTTTTGGAGTGC AAATTACAATAAGTG SMU.2146c 2009136 - 2008531 - | hypothetical protein TERM 2226 2009271 - 2009246 - R 91 -5.6 -5.74086 | opp_overlap 2009246 AAATTAAATAAAAAA TACCCAAAAT ATTAAA ATTTTGAGTA TTTTGCACCTATATC SMU.2147c 2010164 - 2009298 - | hypothetical protein SMU.2148c 2011147 - 2010353 - | cobalt permease SMU.2149c 2011982 - 2011140 - | cobalt transporter ATP-binding subunit TERM 2227 2011941 - 2011916 - G 79 -6.9 -4.68506 | gap 1, opp_overlap 2011924 AACTAACGTTAAAAA GGGCACGACCTT CAA AAGGT-GTTCCC GCTTGATAAGTGTAA SMU.2150c 2012800 - 2011958 - | cobalt transporter ATP-binding subunit pgsA 2013346 - 2012804 - | putative phosphotidylglycerophosphate synthase SMU.2152c 2014335 - 2013358 - | hypothetical protein SMU.2153c 2015700 - 2014408 - | putative peptidase SMU.2154c 2016949 - 2015702 - | putative peptidase TERM 2228 2016493 - 2016479 - G 75 -4.3 -5.03314 | opp_overlap 2016468 2016487 TTCATCTTTAAAAAA GAGTT TTTGT AACTC TAAGTGACTATAATA SMU.2155 2017028 - 2017393 + | hypothetical protein recF 2017396 - 2018487 + | recombination protein F TERM 2229 2018508 - 2018529 + T 89 -8.9 -4.431 | opp_overlap 2018499 AAACTACTGTCAACG TCTTTTACT CTAT AGTAAAAGA TTTTGTCAATCAATA TERM 2230 2018600 - 2018649 + T 75 -9.7 -2.8294 | opp_overlap 2018615, overlap 2018615 ATTGTAAATGTATTC TTGACAGTAAAAAAACTAAAACA AAAT TGTTTTAGTTTTTTTACTTAAAA TCATTGTACAGAATA TERM 2231 2018615 - 2018634 + T 100 -8 -5.63103 | opp_overlap 2018615, overlap 2018600 TTGACAGTAAAAAAA CTAAAACA AAAT TGTTTTAG TTTTTTTACTTAAAA TERM 2232 2018634 - 2018615 - T 100 -8 -5.58454 | opp_overlap 2018600 2018615 TTGACAGTAAAAAAA CTAAAACA AAAT TGTTTTAG TTTTTTTACTTAAAA guaB 2020131 - 2018650 - | inositol-5-monophosphate dehydrogenase TERM 2233 2020269 - 2020237 - R 83 -5.8 -5.15117 | gap 1, opp_overlap 2020240 GAAAATTTCAAAAAA GAACAGAAG-TTAAT TAAC ATTAGTCTTCTGTTC TCCCCCAAATGGTCT SMU.2158c 2021310 - 2020288 - | tryptophanyl-tRNA synthetase II TERM 2234 2021285 - 2021301 + g 70 -5.9 -4.2243 | overlap 2021287 CCTGTTGGTCGATCT CCTGTTA AAA TAATAGG TTTTGACATATTTGT TERM 2235 2022125 - 2022154 + G 75 -10.1 -3.05294 | opp_overlap 2022124 TTGTGGAATTAAATG GCTGGGAAGCT GAAAGTGA AGCTTCTCAGC TCTTGCAAAATTTGA SMU.2159 2021743 - 2023362 + | putative ABC transporter, ATP-binding protein TERM 2236 2023360 - 2023381 + F 100 -10.3 -4.87318 | GCACAACTCTGGCAA TAAAAAGCG GAAA CGCTTTTTA TTTTTACATTTTAAA TERM 2237 2025573 - 2025554 - g 84 -2.2 -5.75599 | overlap 2025562 GAAATTATAAAAAAA CTCAAACA TTAA TATTTAAG CTTAGTTTTCCAAAA TERM 2238 2025712 - 2025702 - g 73 -2.6 -5.23396 | AACAACTAAGAAAAA TAAA ATT TTTA CTACCTATGTTGCCA SMU.2160 2023402 - 2025975 + | transmembrane protein TERM 2239 2026049 - 2026084 + T 100 -11.4 -5.47159 | opp_overlap 2026049 GAGGAAACAATAGAA CTCTTAGAAGTATTGA TGTA TCAGTATTTCTAGGAG TTTTTTATCTTGAAA TERM 2240 2026144 - 2026108 - T 100 -22.7 -5.79595 | opp_overlap 2026115 2026120 CTTGAAAAGAAAAAA GATTGAAGAAAAGATCC AAT GGATCTTTTCTTCAATC TAAAATCCCATATTA TERM 2241 2026115 - 2026137 + T 100 -13.6 -3.12999 | opp_overlap 2026108, overlap 2026120 AGAAAAAAGATTGAA GAAAAGATCC AAT GGATCTTTTC TTCAATCTAAAATCC TERM 2242 2026120 - 2026132 + T 82 -7.7 -4.70169 | opp_overlap 2026108, overlap 2026115 AAAGATTGAAGAAAA GATCC AAT GGATC TTTTCTTCAATCTAA TERM 2243 2026746 - 2026781 + T 74 -6.3 -4.42062 | opp_overlap 2026749, overlap 2026749 AATCCTGCTGGGATC AAAGAAGTCTTTTAG TCTCAT CTAAAGGGCTTCTTC TTTATTTAAAAAATA TERM 2244 2026749 - 2026778 + T 83 -8 -4.32678 | opp_overlap 2026749, overlap 2026746 CCTGCTGGGATCAAA GAAGTCTTTTAG TCTCAT CTAAAGGGCTTC TTCTTTATTTAAAAA SMU.2161c 2027429 - 2026767 - | hypothetical protein TERM 2245 2027443 - 2027456 + r 71 -5.3 -4.62904 | ATAATTTCTCCTTTT GTTTC ACGT GAAAC TTTTTAAAGATATTT SMU.2162c 2028251 - 2027772 - | SPOUT methyltransferase superfamily protein TERM 2246 2028354 - 2028383 + H 74 -2.9 -5.43514 | gap 1, overlap 2028362 CAATCAACATTTTCT GAAAGTTTTCCACA ACT TGTGGATT-CTTTC TTTTTTAATTATTTT TERM 2247 2028362 - 2028376 + H 89 -8.6 -4.59882 | overlap 2028354 ATTTTCTGAAAGTTT TCCACA ACT TGTGGA TTCTTTCTTTTTTAA TERM 2248 2029013 - 2029000 - g 72 -2.3 -5.18371 | overlap 2029010 TCGGATAAAATAAAA GTTGG AGAA CCAGC AATCGCTATTGGTAG htrA 2028457 - 2029665 + | serine protease HtrA TERM 2249 2029692 - 2029722 + F 71 -5.5 -4.65895 | opp_overlap 2029692 2029695 TATACAATACAACAA TAAGTCTGGGA CAACCATAA TCCCAGTCTTA TTTTTAGATAAAACA TERM 2250 2029722 - 2029692 - f 77 -7.6 -4.02093 | opp_overlap 2029692, overlap 2029695 TATACAATACAACAA TAAGTCTGGGACAA CCA TAATCCCAGTCTTA TTTTTAGATAAAACA SMU.2165 2030140 - 2030913 + | putative SpoJ