TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.591451 %AT, 1663994 nt, 11448 terms. Intergenic: 0.652938 %AT, H2T: 290521 nt, 2431 terms; T2T: 64154 nt, 1369 terms; H2H: 62822 nt, 881 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|116515308|ref|NC_008533.1| Streptococcus pneumoniae D39, complete genome (length 2046115) dnaA 1 - 1362 + | chromosomal replication initiation protein dnaN 1521 - 2657 + | DNA polymerase III subunit beta TERM 1 2659 - 2690 + F 75 -9.6 -2.66316 | gap 1, opp_overlap 2659 2664, overlap 2664 TTCGTACAAATTAAG TGAAAGAGGTTGAGC CTG GCTC-GCCTCTTTTA TGATATAATCGGAAA TERM 2 2664 - 2685 + F 80 -7.3 -4.52047 | gap 1, opp_overlap 2664 2659, overlap 2659 ACAAATTAAGTGAAA GAGGTTGAGC CTG GCTC-GCCTC TTTTATGATATAATC SPD_0003 2722 - 2916 + | hypothetical protein SPD_0004 3000 - 4115 + | translation-associated GTPase TERM 3 4138 - 4160 + F 74 -6.3 -4.4267 | opp_overlap 4139 4154, overlap 4131 4139 TAAATGGTGTCAATT AGGTTGGAA AAAAA TTCCAACCC TTTTGGCTTTTGAAA TERM 4 4139 - 4159 + F 79 -9.8 -3.24879 | opp_overlap 4139 4154, overlap 4138 4131 AAATGGTGTCAATTA GGTTGGAA AAAAA TTCCAACC CTTTTGGCTTTTGAA TERM 5 4159 - 4139 - f 75 -9.8 -2.7186 | opp_overlap 4139 4138 4131, overlap 4154 AAATGGTGTCAATTA GGTTGGAA AAAAA TTCCAACC CTTTTGGCTTTTGAA pth 4186 - 4755 + | peptidyl-tRNA hydrolase TERM 6 5009 - 5022 + G 71 -3.8 -4.87807 | overlap 4977 TTTTGGTAGATGATG CTCC TATGGT GGAG TTTTTGATGTCTTCA TERM 7 6469 - 6459 - g 70 -5.4 -4.43911 | AAAGGCCAAGCAAAA GGTT AAG AACC AGGTAGAGGATATAG mfd 4756 - 8265 + | transcription-repair coupling factor SPD_0007 8323 - 8589 + | S4 domain-containing protein SPD_0008 8582 - 8950 + | hypothetical protein SPD_0009 8955 - 9077 + | hypothetical protein SPD_0010 9070 - 10338 + | hypothetical protein TERM 8 11127 - 11145 + G 77 -8.2 -4.24002 | opp_overlap 11123 11122 CTTACAAAAGCTCAG TTTGCTGA AGT TCAGCAGA TTTTAAAATTTAAAA TERM 9 11295 - 11305 + G 74 -4 -5.04377 | CAAAATCAGGTAGCT TATC AAG GATA TTTATTTTCTTTTGG TERM 10 11497 - 11523 + G 71 -6.1 -4.14392 | gap 1, opp_overlap 11515, overlap 11486 ACTCTGCTCTTATTA TTGAG-CAATTT GGTG AAATTGTCTCAA TTTTGGGAATTGCGA tilS 10335 - 11612 + | tRNA(Ile)-lysidine synthetase hpt 11616 - 12158 + | hypoxanthine-guanine phosphoribosyltransferase TERM 11 12334 - 12322 - g 71 -6.3 -4.30987 | AGTTGGTACAAGAAA TTACC GAT GGTAA TGTAAAAGAATTAAC TERM 12 13203 - 13213 + G 73 -6.8 -4.25283 | GATCCTGCCCTTTTG CGTC CAG GACG TTTTGATAGAAAAGT ftsH 12174 - 14132 + | cell division protein FtsH TERM 13 14139 - 14156 + F 100 -11.3 -5.28826 | opp_overlap 14133 GAAAAATAACCCTGA GAGAGGC TGGA GCCTCTC TTTTTTGTGCAGTTT comX1 14254 - 14733 + | transcriptional regulator ComX1 TERM 14 14945 - 14934 - f 77 -3 -5.52986 | ACTTGATGAAAAAAA GTTT AAAA AAAC TTAAAAATCTTCAAA TERM 15 15130 - 15116 - f 95 -8.6 -4.89605 | GAAAAAAACAATAAA TCTGTC AGT GACAGA AATGAGTAAGAACTC TERM 16 17232 - 17213 - f 91 -12.2 -3.62096 | opp_overlap 17212 17211 CGGCAGGAGGGCAAA CCGAAGAG TTTA CTCTTCGG GGTTGTAGGACTGCA TERM 17 20130 - 20143 + F 89 -6.7 -5.60689 | opp_overlap 20130 GAGTAATTGAGTTAA GAGGT TTAG ACCTC TTTTTTGTTATGTAA TERM 18 20999 - 21045 + F 73 -4.6 -4.83518 | gap 1, opp_overlap 20999, overlap 20994 21002 GGCTTATATCAAAAA GAACCTC-AAAAAGGTATTAC CAAGTT GCAATACCTTTTACGAGGCTC TTTTCTCTTGTTCTT TERM 19 21045 - 20999 - f 100 -11.2 -4.8048 | gap 1, opp_overlap 20999 20994 21002 GGCTTATATCAAAAA GAACCTCA-AAAAGGTATTAC CAAGTT GCAATACCTTTTACGAGGCTC TTTTCTCTTGTTCTT TERM 20 21140 - 21162 + F 100 -9.2 -5.15117 | opp_overlap 21144 GAAAGCGAAGATCTA GAAAGGACAA ATT TCGTCCTTTC TTTTTTGAAGTTTTC TERM 21 21965 - 21926 - f 71 -5.3 -4.50976 | TTTTATACTAGAAAA TCAGAACCATAATACCT ATATAA AAATATTATAGTTCTAA TAGGACTTACCCAAA SPD_0023 22168 - 22404 + | hypothetical protein TERM 22 22624 - 22611 - f 73 -8.1 -3.61244 | overlap 22613 TATGTGAGAAAGGAA GAGCC TGAG GGCTC AGACAAGATTATGAC purA 22635 - 23921 + | adenylosuccinate synthetase TERM 23 24042 - 24059 + F 100 -9.1 -5.80817 | opp_overlap 24042 TAATCTCCCTATAGA GTCACCG CATT CGGTGGC TTTTTTTGTGTTGGG SPD_0025 24122 - 24589 + | cytidine/deoxycytidylate deaminase family protein dut 24776 - 25219 + | deoxyuridine 5'-triphosphate nucleotidohydrolase SPD_0028 25179 - 25736 + | hypothetical protein radA 25849 - 27111 + | DNA repair protein RadA SPD_0030 27184 - 27681 + | hypothetical protein TERM 24 28114 - 28131 + G 70 -3.5 -4.87893 | GCTTTGATTCCTGTG CGAAAAT TAAA ATTTTTG TTTTTACTTGGAATT SPD_0031 27706 - 28365 + | hypothetical protein SPD_0032 28358 - 28489 + | hypothetical protein TERM 25 28512 - 28536 + F 74 -3.5 -5.34655 | opp_overlap 28515, overlap 28515 TTCAAAAGAATGATG CAAGGGTACAA ATA TGGTGCCCTTC TTTTATTTTTGATTG TERM 26 28515 - 28533 + F 74 -5.2 -4.70511 | opp_overlap 28515, overlap 28512 AAAAGAATGATGCAA GGGTACAA ATA TGGTGCCC TTCTTTTATTTTTGA prsA 28634 - 29602 + | ribose-phosphate pyrophosphokinase TERM 27 29611 - 29628 + T 100 -9.9 -5.04265 | opp_overlap 29610 29611 AATTTAATGACCAAG CCTGAGA TGAT TCTCAGG TTTTTCGTCTTTTTT TERM 28 29628 - 29611 - T 75 -9.9 -2.56908 | opp_overlap 29611, overlap 29610 AATTTAATGACCAAG CCTGAGA TGAT TCTCAGG TTTTTCGTCTTTTTT TERM 29 30140 - 30088 - T 100 -16 -4.52589 | gap 1, opp_overlap 30089 30090, overlap 30090 TTTTTCTACACAAAA TAGGCTCCATAATATCCATAGGG GATTTACT CACTATGGATATTATGGAGCC-A TTTTACAACAGTGCC TERM 30 30089 - 30140 + T 100 -19.1 -4.08767 | gap 1, opp_overlap 30088 30090, overlap 30090 TTTTCTACACAAAAT AGGCTCCATAATATCCATAG-GGG ATTTA CTCACTATGGATATTATGGAGCCA TTTTACAACAGTGCC TERM 31 30139 - 30090 - T 100 -21.1 -3.87627 | opp_overlap 30089 30090, overlap 30088 TTTCTACACAAAATA GGCTCCATAATATCCATAGGG GATTTACT CACTATGGATATTATGGAGCC ATTTTACAACAGTGC TERM 32 30090 - 30139 + T 100 -22.6 -3.05046 | gap 1, opp_overlap 30090 30088, overlap 30089 TTTCTACACAAAATA GGCTCCATAATATCCATAG-GGG ATTTA CTCACTATGGATATTATGGAGCC ATTTTACAACAGTGC SPD_0035 30376 - 30143 - | hypothetical protein SPD_0036 30485 - 30369 - | hypothetical protein TERM 33 30540 - 30556 + r 74 -6.6 -4.36931 | opp_overlap 30539 TTAATTCCAAGAATG CCATCT TAACC AGATGG TTTTCCTGTCCATTG SPD_0037 31053 - 30700 - | hypothetical protein TERM 34 32991 - 33005 + G 82 -11.4 -3.15841 | overlap 32989 AGCAGTGGATGTTTT GGAGCG TCT CGCTCC TATTGCTCCGATTGT SPD_0038 31306 - 33939 + | DNA polymerase I TERM 35 33943 - 33957 + F 80 -4.9 -5.31275 | opp_overlap 33937 33943 GAGGCTAAATAAAAA GGGGG CTAGT CCTCC TTTTTTGTAGTAGAA TERM 36 33957 - 33943 - f 72 -2.7 -5.28942 | opp_overlap 33943, overlap 33937 GAGGCTAAATAAAAA GGGGG CTAGT CCTCC TTTTTTGTAGTAGAA SPD_0039 34024 - 34461 + | hypothetical protein TERM 37 34468 - 34485 + T 83 -7.7 -4.75289 | opp_overlap 34468, overlap 34463 GAAGCATAAGAAAAA GGTAGCT GATG GGCTACC TTTTGTGTTATACTC TERM 38 34485 - 34468 - T 89 -7 -5.24416 | opp_overlap 34463 34468 GAAGCATAAGAAAAA GGTAGC TGATGG GCTACC TTTTGTGTTATACTC TERM 39 34595 - 34583 - T 71 -7.7 -3.58905 | AGGTTGCAGATAGAA CTGAC GAA GTCAG TAACATATATACGGC SPD_0040 35662 - 34652 - | hypothetical protein araT 35811 - 36980 + | aromatic amino acid aminotransferase TERM 40 37455 - 37468 + G 70 -3.1 -4.89521 | TCTGCCATCGGGTTG GTCAG GCTT TTGAC TTTTCTTTCAAATAT recO 36977 - 37747 + | DNA repair protein RecO TERM 41 37992 - 37974 - g 87 -6 -5.29445 | TCGGAATAAGAAAAA TGCCAGTA TGG TATTGGCA GCCAAGGCTGTCAAA plsX 37744 - 38736 + | putative glycerol-3-phosphate acyltransferase PlsX SPD_0044 38742 - 38975 + | acyl carrier protein, putative TERM 42 39253 - 39211 - f 88 -7.2 -4.98531 | overlap 39205 39245 TTGCCAAAGTAAAAA CGTTTAAAATGTTTTCAACA ACC TATCGAAATCATCGTAAACG CTTCGGATTACGAAT blpU 39514 - 39744 + | bacteriocin BlpU SPD_0047 39747 - 39872 + | hypothetical protein TERM 43 39861 - 39850 - f 70 -4.4 -4.77165 | CTTCGGAGAAGAAAA CAGA AAAA TCTG TTAAAAAATAATCAA TERM 44 40159 - 40182 + F 100 -9.6 -5.10077 | overlap 40161 ATAGCATATTTTTAG TGGGCAGGAC TCTT GTTCTGCCTA TTTTTTCGGCTCTTT TERM 45 40161 - 40180 + F 93 -10 -4.16351 | overlap 40159 AGCATATTTTTAGTG GGCAGGAC TCTT GTTCTGCC TATTTTTTCGGCTCT TERM 46 40234 - 40256 + F 100 -13.6 -5.27779 | opp_overlap 40238 AAAAGCTAAGCTCGA GAAAGGACAA ATT TTGTCCTTTC TTTTTTGATATTCAG TERM 47 40252 - 40238 - f 79 -8.6 -3.89614 | opp_overlap 40234 GCTAAGCTCGAGAAA GGACAA ATT TTGTCC TTTCTTTTTTGATAT TERM 48 40623 - 40642 + F 72 -9.4 -2.64981 | opp_overlap 40621 CATACGAAAAGTAGG GCGATAAA AATG TTTATCGC TGAGTTTACGACTAT TERM 49 41625 - 41573 - f 73 -4.5 -4.96848 | overlap 41575 TTTTCTACACAAAAA TAGGCTCCATAATATCCATAG-GGG ATTTA CCCACTACAAATATTATAGAACC-A TTTTTTTATCCAAAA TERM 50 41624 - 41575 - f 93 -9.6 -4.11141 | gap 1, overlap 41573 TTCTACACAAAAATA GGCTCCATAATATCCATAG-GGG ATTTA CCCACTACAAATATTATAGAACC ATTTTTTTATCCAAA TERM 51 41834 - 41816 - f 78 -10.4 -2.61383 | overlap 41815 AGTCCTATCTACAAC CTCAAAAC AGT GTTTTGAG CAGCCTGCGGCTAGT comA 41902 - 44055 + | competence factor transporting ATP-binding/permease protein ComA comB 44068 - 45417 + | competence factor transport protein ComB TERM 52 45451 - 45474 + F 84 -3.9 -5.64421 | TAAATAATTTTTAAA CTGTGAGAA AGATTC TTCTTGCAG TTTTTTCTTTACAAT purC 45587 - 46294 + | phosphoribosylaminoimidazole-succinocarboxamide synthase TERM 53 46375 - 46336 - f 70 -8 -3.18268 | gap 1, opp_overlap 46342 46349, overlap 46349 TCTCAACTAAAAGGA CT-CAGGCTGAAAAGGTCC CCC AGACCTTTTCACTCTGTAG AGAACTAGGTGAACT TERM 54 47817 - 47807 - g 79 -6.8 -4.56597 | opp_overlap 47807 47816 47816, overlap 47816 GTTGTCCGTGAAAAA CCTG AAG CAGG TGATGTGATCATCCT TERM 55 49425 - 49414 - g 74 -4.4 -4.96468 | opp_overlap 49414 TAAAGCCAAAGAAAA GGTT GAAA AACC TGTGGTTTACATCCC SPD_0052 46496 - 50221 + | phosphoribosylformylglycinamidine synthase, putative purF 50314 - 51756 + | amidophosphoribosyltransferase purM 51793 - 52815 + | phosphoribosylaminoimidazole synthetase purN 52812 - 53357 + | phosphoribosylglycinamide formyltransferase SPD_0056 53441 - 53950 + | vanZ protein, putative purH 53975 - 55522 + | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase TERM 56 55533 - 55554 + F 90 -8.1 -5.15969 | opp_overlap 55528 55533 ATTAAGAAGATAAAA GGGAAGAAA ACAG TTTCTTTCC TTTTTTGGCTTAAAA TERM 57 55554 - 55533 - f 77 -5.9 -4.80656 | opp_overlap 55533, overlap 55528 ATTAAGAAGATAAAA GGGAAGAAA ACAG TTTCTTTCC TTTTTTGGCTTAAAA TERM 58 56872 - 56857 - g 91 -6.2 -5.46657 | TATCCCAACAAAAAA TAGAAG GACT CTTCTA CCGAACAGATATCGG purD 55644 - 56906 + | phosphoribosylamine--glycine ligase TERM 59 56989 - 56965 - f 100 -13 -4.07568 | TCGTCGTGGTGAAAA GACCAGAACA GTGAA TGTTCTGGTC AGGGGGAAACTTGGA TERM 60 57196 - 57169 - f 100 -15.8 -3.53091 | opp_overlap 57175, overlap 57172 ACCGCCGTTGTGAAA GAACGATTGGAT GATA ATCCAATCGTTC AGGGAAATTGGAAGA TERM 61 57193 - 57172 - f 93 -11.7 -3.90744 | opp_overlap 57175, overlap 57169 GCCGTTGTGAAAGAA CGATTGGAT GATA ATCCAATCG TTCAGGGAAATTGGA purE 57309 - 57797 + | phosphoribosylaminoimidazole carboxylase catalytic subunit TERM 62 57816 - 57844 + G 75 -8.1 -4.04318 | AATCGGAATTATCGG TGGCGGTCAACTG GGT CAGATGATGGCCA TTTCTGCTATCTACA purK 57784 - 58875 + | phosphoribosylaminoimidazole carboxylase ATPase subunit SPD_0061 58885 - 59112 + | hypothetical protein purB 59175 - 60473 + | adenylosuccinate lyase TERM 63 60510 - 60482 - T 100 -13.3 -5.30155 | opp_overlap 60482 TGATTAATTAAAAAA TAAACAGCGAGCT TCA ATCTCGCTGTTTA TTTTTTATCGAAAAG TERM 64 60482 - 60510 + T 100 -13.3 -5.24129 | opp_overlap 60482 TGATTAATTAAAAAA TAAACAGCGAGCT TCA ATCTCGCTGTTTA TTTTTTATCGAAAAG strH 64466 - 60528 - | beta-N-acetylhexosaminidase TERM 65 60610 - 60626 + g 87 -5.1 -5.47431 | overlap 60611 TCTGCAGAATCGTGA GTTCCTG TTT CAGGAAG TTTTTTCTCTGTTAC TERM 66 60611 - 60625 + g 77 -8.6 -3.86832 | overlap 60610 CTGCAGAATCGTGAG TTCCTG TTT CAGGAA GTTTTTTCTCTGTTA TERM 67 61198 - 61221 + g 76 -4.6 -5.12172 | GCTGTGATAATATTT TCCTGACC AGCTGGGA GGTTAGGA TTTTCTTTCTTGATA TERM 68 61385 - 61397 + g 77 -7.7 -4.20918 | TGGCTACAAGTGTGT CAAGC TCA GCTTG TTTATTACGGTTGAG TERM 69 64418 - 64451 + g 71 -3.9 -4.946 | opp_overlap 64406 64411 64438, overlap 64411 64421 64437 64438 GAACAGAAGCTGCTC CTACAGCGTATTT ACGAATAG AAAAACGCTGTTG TTTTTCATGTTTCAT TERM 70 64746 - 64780 + r 70 -8 -3.21416 | gap 1, opp_overlap 64746 64752, overlap 64752 GGTATAATAAGCATA GAA-AAAGCCCGAGC GATTAG GCTCAGGCTTTCTTC TTAGTGATCACGGTC TERM 71 64780 - 64746 - R 80 -10.2 -3.04443 | gap 1, opp_overlap 64746 64752, overlap 64752 GGTATAATAAGCATA GAA-AAAGCCCGAGC GATTAG GCTCAGGCTTTCTTC TTAGTGATCACGGTC TERM 72 64773 - 64752 - R 100 -9.4 -5.05079 | opp_overlap 64752 64746, overlap 64746 ATAAGCATAGAAAAA GCCCGAGC GATTAG GCTCAGGC TTTCTTCTTAGTGAT TERM 73 64752 - 64773 + r 80 -7.2 -4.49316 | opp_overlap 64746 64752, overlap 64746 ATAAGCATAGAAAAA GCCCGAGC GATTAG GCTCAGGC TTTCTTCTTAGTGAT SPD_0064 65524 - 64781 - | transcriptional regulator, GntR family protein bgaC 65845 - 67632 + | Beta-galactosidase 3 TERM 74 68022 - 68006 - g 71 -9.5 -2.9062 | overlap 68003 68015 CGTAGTAGACAAGGA TGTGGAA GAC TTCCACA AACTGGCAGAAAAAG SPD_0066 67629 - 68105 + | PTS system, IIB component SPD_0067 68133 - 69038 + | PTS system, IIC component SPD_0068 69025 - 69840 + | PTS system, IID component SPD_0069 69847 - 70251 + | PTS system, IIA component agaS 70550 - 71716 + | sugar isomerase domain-containing protein galM 71832 - 72869 + | aldose 1-epimerase TERM 75 72905 - 72942 + F 70 -4.3 -4.78237 | overlap 72941 TTAAAATTAAAATAA CGCATATTGTCAGGT GATGAAAA GTTTGATAATATGCG TTTTATTATGAAATG SPD_0072 73076 - 73930 + | hypothetical protein SPD_0073 74080 - 74337 + | hypothetical protein TERM 76 74512 - 74458 - f 100 -29.1 -3.67296 | TATCAGGTATTGAAA TGTACTGCCCCCCAAAAGTTAGA TTCTTTCTG TCTAACTTTTGGGGGGCAGTACA TAAAAACCTTGATAG TERM 77 74655 - 74637 - f 78 -10.4 -2.61383 | opp_overlap 74636, overlap 74636 74646 AGTTCTATCCACAAC CTCAAAAC AGT GTTTTGAG CTGACTTCGTCAGTT TERM 78 75259 - 75273 + F 72 -5 -4.7373 | overlap 75260 TCATCAGCTTCCTCC TTGACA CTT TGTCAG TTTTTGATACAATAG SPD_0074 75312 - 76076 + | phosphorylase, Pnp/Udp family protein, putative TERM 79 76427 - 76409 - g 72 -10.4 -2.61383 | overlap 76408 AGTTCTATCCACAAC CTCAAAAC AGT GTTTTGAG CAACCTGTGACTAGC TERM 80 76497 - 76485 - g 82 -6.3 -4.93365 | overlap 76491 GCCTATAATCAAAAA GAGAA ATT TTCTC CTGAAAAGCATATAG SPD_0075 76332 - 76517 + | hypothetical protein SPD_0076 76686 - 78065 + | potassium uptake protein, Trk family protein SPD_0077 78079 - 78744 + | potassium uptake protein, Trk family protein TERM 81 78746 - 78760 + F 88 -7.1 -5.1675 | opp_overlap 78746 CATTGAATTCGTAAA GAGGG ATGAC CCCTC TTTTTTGATGCCTAA TERM 82 78760 - 78746 - f 71 -7.8 -3.61268 | opp_overlap 78746 CATTGAATTCGTAAA GAGGGA TGA CCCCTC TTTTTTGATGCCTAA TERM 83 78964 - 78952 - f 71 -7.7 -3.58905 | AGGTTGCAGATAGAA CTGAC GAA GTCAG TAACATCTATACGGC SPD_0078 79054 - 79593 + | glycosyl transferase, group 2 family protein SPD_0079 79660 - 80070 + | hypothetical protein TERM 84 80090 - 80123 + F 73 -4.1 -4.98531 | gap 1, opp_overlap 80098, overlap 80084 80094 80095 AGTGTTTTATAAGAG GGATTTAAGAAAAATT TTA ACTTTTTCTTA-GTCC TTTTTAATTTCAGGA TERM 85 80896 - 80882 - g 73 -7.2 -3.99986 | TTAACAAAAGGGAAA TACTTC TAT GAAGTA GACTTAAATGGCAAT SPD_0080 80186 - 83671 + | cell wall surface anchor family protein TERM 86 83787 - 83816 + F 80 -6.6 -4.82901 | opp_overlap 83787 83789 83804, overlap 83789 GTAAAACAATAAAAA TAGTGTTATACT TAAAGC AGTATAGCACTG TTTTTATCAAAGGAG TERM 87 83816 - 83787 - f 74 -2.2 -5.4593 | opp_overlap 83787 83789, overlap 83789 83804 GTAAAACAATAAAAA TAGTGTTATACT TAAAGC AGTATAGCACTG TTTTTATCAAAGGAG TERM 88 83789 - 83814 + F 73 -7 -4.03995 | opp_overlap 83787 83789 83804, overlap 83787 AAAACAATAAAAATA GTGTTATACT TAAAGC AGTATAGCAC TGTTTTTATCAAAGG SPD_0081 83838 - 84536 + | DNA-binding response regulator TERM 89 84582 - 84596 + G 79 -5 -5.09173 | TTATTTCAACCCTCT TAACCA TTT TGGTTG TTTTTTGGGCTGTTC SPD_0082 84533 - 85585 + | sensor histidine kinase TERM 90 86010 - 85981 - g 78 -7.3 -4.42748 | GTAGGTGAAAAACAA TTCCGTAACTTGT TCGT ACAAGCTACAAAA ATCAAAGGCGGAATC rpsD 85780 - 86391 + | 30S ribosomal protein S4 TERM 91 86433 - 86459 + F 87 -6.5 -5.4387 | opp_overlap 86433 AGGCCTTGATATTAA GCACTTTGGGA CGTTC TCCCTTAGTGC TTTTTTGATTTCTCT TERM 92 86629 - 86607 - g 72 -3.4 -5.0133 | GATTTTCGTAAAAAA GTTCTCTC TTATTGT GAGCGAAC AGGTAGTATAACAGA SPD_0084 86577 - 86735 + | IS630-Spn1, transposase Orf1 SPD_0085 86973 - 86833 - | hypothetical protein SPD_0086 87053 - 87313 + | hypothetical protein SPD_0087 87267 - 87488 + | hypothetical protein TERM 93 87544 - 87503 - f 100 -9.7 -4.88711 | gap 1, opp_overlap 87503 ATAACATATTAAAAA TCTCCAGATTA-GGAACT ATCTCTG AGTTCCCTAGTCTGGAGA TTTTTCAGTATACCC TERM 94 87503 - 87544 + F 100 -11.9 -4.70659 | gap 1, opp_overlap 87503 ATAACATATTAAAAA TCTCCAGATTA-GGAACT ATCTCTG AGTTCCCTAGTCTGGAGA TTTTTCAGTATACCC SPD_0088 87807 - 88736 + | ABC transporter, permease protein SPD_0089 88750 - 89673 + | ABC transporter, permease protein TERM 95 89832 - 89812 - f 72 -8.3 -3.35996 | overlap 89813 89819 CAGTCTTATCTACAA CCTCAAAGC AGT GCTTTGAGC AGCCTGCGGCTAGTT TERM 96 89831 - 89813 - f 84 -11.8 -2.61383 | overlap 89812 89819 AGTCTTATCTACAAC CTCAAAGC AGT GCTTTGAG CAGCCTGCGGCTAGT SPD_0090 89931 - 91406 + | ABC transporter, substrate-binding protein TERM 97 91455 - 91492 + F 100 -13.5 -5.40072 | opp_overlap 91455 91456, overlap 91456 CTCCTAAAATAAGAA TCACTGCTTTCCTCAGG TTGG TCTGGGGAGGGCAGTGG TTTTTTTGGCACAAG TERM 98 91456 - 91491 + F 100 -14.8 -3.83561 | opp_overlap 91455 91456, overlap 91455 TCCTAAAATAAGAAT CACTGCTTTCCTCAGG TTGG TCTGGGGAGGGCAGTG GTTTTTTTGGCACAA TERM 99 91504 - 91523 + F 72 -5 -4.76193 | opp_overlap 91507, overlap 91507 GTGGTTTTTTTGGCA CAAGGATA TAGA TATCCATG TTTTCTCTTGTCCTT TERM 100 91776 - 91790 + G 80 -11.4 -2.83164 | opp_overlap 91775 91776 TTTCTGTAAATCAAT CGGCCT TAA AGGCCG TATCCTAGTCGCTGA TERM 101 91790 - 91776 - g 79 -11.4 -2.70525 | opp_overlap 91776, overlap 91775 TTTCTGTAAATCAAT CGGCCT TAA AGGCCG TATCCTAGTCGCTGA SPD_0091 91678 - 92664 + | hypothetical protein TERM 102 92672 - 92687 + F 84 -6.8 -5.06585 | opp_overlap 92672 CTGTATAAGATCAAA CAGTCC TCAG GGGCTG TTTTTCTATGCTTTG SPD_0092 92786 - 93646 + | hypothetical protein TERM 103 93654 - 93671 + T 88 -7.7 -5.0538 | opp_overlap 93654 AAAAGTAAAGCAGAA GCAGGTC AATC GACTTGC TTTTTTGACATAGAA TERM 104 93710 - 93691 - T 95 -8.6 -5.4251 | opp_overlap 93691 TTGACATAGAAAAAA TCCTGCCA AGGA TGACAGGA TTGAATTTTAAAGAA SPD_0093 94782 - 93718 - | hypothetical protein SPD_0094 95756 - 94845 - | hypothetical protein SPD_0095 96342 - 95749 - | hypothetical protein SPD_0096 96655 - 96329 - | hypothetical protein TERM 105 96792 - 96773 - R 93 -7.2 -5.4251 | opp_overlap 96773 TTTATATATAAAAAA CTTCTAGC TAAA ACTAGAAG TTTAAAGGATCTTAT SPD_0097 97960 - 96794 - | transporter, putative SPD_0098 98018 - 99175 + | glycosyl transferase, group 2 family protein TERM 106 99475 - 99489 + G 75 -2.9 -5.22312 | TACAGCAAGATTACG GATTT CATGA AAATC TTTTTTGGTGTGACT capD 99217 - 101067 + | capsular polysaccharide biosynthesis protein TERM 107 101073 - 101119 + T 100 -15.5 -3.494 | opp_overlap 101078, overlap 101078 CATTGAATAAAAAAG AAAAACGCATATTACCAAGTT AAACA ACCTTGGTAATATGCGTTTTA TTATGTAGAGACTTA TERM 108 101114 - 101078 - T 100 -15.4 -5.84011 | opp_overlap 101073 101078 AATAAAAAAGAAAAA CGCATATTACCAAGTT AAACA ACCTTGGTAATATGCG TTTTATTATGTAGAG TERM 109 101078 - 101114 + T 100 -15.4 -4.84311 | opp_overlap 101078, overlap 101073 AATAAAAAAGAAAAA CGCATATTACCAAGTT AAACA ACCTTGGTAATATGCG TTTTATTATGTAGAG SPD_0101 102095 - 101463 - | hydrolase, haloacid dehalogenase-like family protein sdhA 102989 - 102117 - | L-serine dehydratase, iron-sulfur-dependent, alpha subunit sdhB 103669 - 102998 - | L-serine dehydratase, iron-sulfur-dependent, beta subunit TERM 110 104268 - 104254 - g 73 -8.6 -3.79043 | overlap 104249 104248 CAGTAGTAAGTGAAA CAGTTG TTT CAACTG TAAGCGGATCTGAAG SPD_0104 103911 - 104414 + | LysM domain-containing protein TERM 111 104443 - 104461 + T 93 -8.1 -5.5762 | opp_overlap 104443 104441 AATAATATGTAAAGA GTCGAGG AAATC CCTCGGC TTTTTTATCTTTCCT TERM 112 104542 - 104565 + T 84 -11.8 -2.65532 | overlap 104537 GTTTCCTCGGTTAGC TCCAGAAGGG AGAA CCCTTTTGGA TAAGTTTAGAATCGT SPD_0105 104785 - 104537 - | hypothetical protein SPD_0106 105242 - 105490 + | bacteriocin, putative TERM 113 105524 - 105497 - f 81 -7.6 -4.42238 | opp_overlap 105499, overlap 105498 105499 GGATTTTAATTAAAA TTCTCCCTCCCC TTTT GGAGAGGGAGTT TCTTCACGGGAGGTA TERM 114 105523 - 105498 - f 86 -11.1 -3.2486 | opp_overlap 105499, overlap 105497 105499 GATTTTAATTAAAAT TCTCCCTCCCC TTTT GGAGAGGGAGT TTCTTCACGGGAGGT TERM 115 105522 - 105499 - f 95 -14.6 -2.54434 | opp_overlap 105499, overlap 105498 105497 ATTTTAATTAAAATT CTCCCTCCCC TTTT GGAGAGGGAG TTTCTTCACGGGAGG TERM 116 105499 - 105522 + F 100 -12.4 -4.15044 | opp_overlap 105499 105498 105497 ATTTTAATTAAAATT CTCCCTCCCC TTTT GGAGAGGGAG TTTCTTCACGGGAGG TERM 117 106390 - 106400 + G 73 -6.8 -4.31166 | overlap 106388 GTTGTCTCATTTTTT GCTG TTG CAGC TTTATCTCTTTATCA SPD_0107 105545 - 107653 + | membrnae protein, putative SPD_0108 107650 - 108291 + | amino acid ABC transporter, ATP-binding protein, putative TERM 118 108357 - 108389 + F 91 -4.4 -5.95539 | gap 2 AATAGCATAAATACG CCTAGGAATG--ACAT TTT ATGTAGCATTTCTAGG TTTTTTTGTTTCAAA SPD_0109 108497 - 109303 + | amino acid ABC transporter, periplasmic amino acid-binding protein, putative argG 109320 - 110516 + | argininosuccinate synthase argH 110545 - 111936 + | argininosuccinate lyase TERM 119 112202 - 112220 + T 93 -8.1 -5.5762 | opp_overlap 112200 112202 AATAATATGTAAAGA GTCGAGG AAATC CCTCGGC TTTTTTATCTTTCCT SPD_0112 113088 - 112225 - | hypothetical protein SPD_0114 115766 - 116233 + | hypothetical protein SPD_0115 116230 - 117582 + | hypothetical protein TERM 120 117921 - 117911 - g 83 -3.2 -5.626 | TATGCGATAAAAAAA GCTA TCT CAGC TAATAGAGGGGCTAT SPD_0116 117728 - 118108 + | hypothetical protein TERM 121 118345 - 118367 + F 93 -9.2 -4.3953 | opp_overlap 118342 118345 TGTATTTAAAAACAA GAGGTTGGTA GAT TATCAGCCTC TTTCTTGTCGTTGAA TERM 122 118588 - 118606 + F 93 -8.1 -5.5762 | opp_overlap 118586 118588 AATAATATGTAAAGA GTCGAGG AAATC CCTCGGC TTTTTTATCTTTCCT SPD_0117 119688 - 120059 + | hypothetical protein TERM 123 120373 - 120357 - f 70 -3.7 -5.0133 | GAGGTTGGGAAAAAA CTCAATT TGA AAGTGAG ATTGAGTAAATCTTT SPD_0118 120653 - 120778 + | hypothetical protein TERM 124 121161 - 121171 + G 70 -3.2 -4.90455 | TTTTCCATTGATTGA TTCC AAG GGGA TTTTTGTAAGTATAT SPD_0119 121084 - 122142 + | hypothetical protein SPD_0120 122456 - 123433 + | hypothetical protein SPD_0121 123810 - 124184 + | hypothetical protein SPD_0122 124392 - 125294 + | hypothetical protein TERM 125 125330 - 125318 - f 72 -4.9 -4.65933 | TATTTGTAAAACAAA TGAAA CAA TTTCA ACTAAGGAGGAGAAA SPD_0123 125350 - 125703 + | hypothetical protein TERM 126 125932 - 125944 + GF 75 -2.7 -5.1925 | overlap 125933 TTTTAATCAATAAGT TTTTC CCA GAAAG TTTTTTGACTTATAC SPD_0124 125670 - 126428 + | hypothetical protein TERM 127 126711 - 126741 + F 77 -9.3 -3.15257 | gap 1, opp_overlap 126684 126682 126734, overlap 126677 126709 126715 126719 TGAAAACATTTATTT TATG-GCAATTCTA AGCT TAGAATTGCTCATA TATATGTATTTGAGC TERM 128 126715 - 126736 + F 78 -10.3 -2.75713 | opp_overlap 126684 126682 126734, overlap 126677 126711 126709 126719 AACATTTATTTTATG GCAATTCTA AGCT TAGAATTGC TCATATATATGTATT TERM 129 127139 - 127161 + F 74 -6.3 -4.3953 | overlap 127159 CTGTATCTAAAAACA GAGGTTGGT CGATT ATCAGCCTC TTTCTTGTCGTTGAA TERM 130 127653 - 127663 + G 71 -4 -4.88407 | AAGTATTTAGAGACT TTCA AAG TGAA TTTTTGCTTGACTGA TERM 131 127753 - 127737 - g 70 -3.6 -4.90778 | opp_overlap 127737 GCTAGTCAAACAAAA CCTGCT ATTCA AGCTGG TGTTTTTATTTTAGA SPD_0125 127557 - 127802 + | hypothetical protein TERM 132 128074 - 128091 + F 100 -9.1 -5.72254 | GCTATAAAGATTGTC CGCAGGC TTAA GCTTGCG TTTTTTGTTGTTTAA pspA 128356 - 130215 + | pneumococcal surface protein A TERM 133 130350 - 130396 + F 79 -5.3 -5.14682 | opp_overlap 130337, overlap 130345 ATGTCATTAAAAAAA CGACTCCTTTTCTCTAACTTG AAAAA TAGATTAGAGAAAATGGGTTG TTTTATTTATTATAG trmU 130616 - 131737 + | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase TERM 134 132047 - 132029 - g 75 -3 -5.29385 | overlap 132036 AAGTTAACGAAAAAA CGGAAGAC GCG GTAGTCCG TGAAGTGAGGGAAGA TERM 135 132305 - 132281 - g 71 -4.9 -4.57073 | overlap 132283 132294 CAGCCTTTTTAAAAA CAGCCCTACCA GAT TGGGAAGGCCA ACTAAGACACATTCA TERM 136 132303 - 132283 - g 71 -7.5 -3.90048 | overlap 132281 132294 GCCTTTTTAAAAACA GCCCTACCA GAT TGGGAAGGC CAACTAAGACACATT SPD_0128 131878 - 132333 + | MutT/nudix family protein gidA 132343 - 134256 + | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA TERM 137 134284 - 134300 + T 77 -9.5 -3.2614 | opp_overlap 134279 TTCTTACGAATGAGT TCAAAGC TTG GCTTTGA TTCATCTCCAACCTC TERM 138 134416 - 134445 + T 87 -11.5 -3.25072 | opp_overlap 134421, overlap 134421 AAAGAAAGCATAGAG AAAAACAGCTCCG AAGA CGGGGCTGTTTTG TTGACTTGTACTCAA TERM 139 134421 - 134440 + T 100 -11.4 -4.73635 | opp_overlap 134421, overlap 134416 AAGCATAGAGAAAAA CAGCTCCG AAGA CGGGGCTG TTTTGTTGACTTGTA TERM 140 134440 - 134421 - T 100 -9.2 -5.06505 | opp_overlap 134421 134416 AAGCATAGAGAAAAA CAGCTCCG AAGA CGGGGCTG TTTTGTTGACTTGTA TERM 141 134548 - 134530 - T 76 -9.6 -2.87931 | opp_overlap 134545 134546, overlap 134533 134545 TTGAGGTTGTAGATA GAACTGAC GAA GTCAGCTC AAAACACAGTTTTGA TERM 142 134545 - 134533 - T 71 -7.7 -3.58905 | overlap 134530 AGGTTGTAGATAGAA CTGAC GAA GTCAG CTCAAAACACAGTTT TERM 143 134546 - 134564 + T 78 -10.4 -2.61383 | opp_overlap 134530 134545, overlap 134545 AACTGACGAAGTCAG CTCAAAAC ACA GTTTTGAG GTTGTGGATAGAACT SPD_0130 136315 - 134636 - | metallo-beta-lactamase domain-containing protein TERM 144 135109 - 135121 + g 84 -7.7 -4.66609 | overlap 135100 CAGTATCCACTGCTA GTCCA GCG TGGAC TTTTTGCATGCGGTA SPD_0131 136550 - 136317 - | hypothetical protein TERM 145 137140 - 137111 - R 78 -7.1 -4.371 | opp_overlap 137105 137111 137113, overlap 137112 137113 TTTACGACACGAAAA TTCCACCCCATCT ATCA AGATGAGGTGGTC TTTGCATTTTTCTAA TERM 146 137139 - 137112 - R 83 -10.6 -3.21778 | opp_overlap 137111 137105 137113, overlap 137111 137113 TTACGACACGAAAAT TCCACCCCATCT ATCA AGATGAGGTGGT CTTTGCATTTTTCTA TERM 147 137113 - 137138 + r 91 -11.9 -3.59063 | opp_overlap 137112 137111 137113, overlap 137111 137105 TACGACACGAAAATT CCACCCCATCT ATCA AGATGAGGTGG TCTTTGCATTTTTCT TERM 148 137138 - 137113 - R 93 -14.1 -2.52585 | opp_overlap 137113 137111 137105, overlap 137112 137111 TACGACACGAAAATT CCACCCCATCT ATCA AGATGAGGTGG TCTTTGCATTTTTCT SPD_0132 137520 - 137368 - | hypothetical protein SPD_0133 137707 - 137522 - | hypothetical protein TERM 149 137688 - 137678 - G 74 -4 -5.02439 | AGATAAGGATAAAAA TTGA TTG TCAA GAATGTCAAAATTTG TERM 150 138277 - 138294 + G 71 -7 -4.08945 | TGCCAAACCTGTCAT GGCAGA AGCACA TCTGCC TTTTGAGCGAGTCAT SPD_0134 137885 - 138568 + | hypothetical protein rimI 138565 - 139002 + | ribosomal-protein-alanine acetyltransferase SPD_0136 138992 - 140002 + | O-sialoglycoprotein endopeptidase TERM 151 140052 - 140074 + F 100 -15 -5.27779 | opp_overlap 140045 AAAAGCTACAATCTG GAGAGTACGA AAT TCGTACTCTC TTTTTTGATGTTCAA TERM 152 140506 - 140490 - f 90 -10.9 -3.72576 | opp_overlap 140490 TCCTGGCGTAGTAAA TCAGTCC AGT GGACTGA TTTAGCCCGAGCCTA TERM 153 140490 - 140506 + F 89 -10.9 -3.53224 | opp_overlap 140490 TCCTGGCGTAGTAAA TCAGTCC AGT GGACTGA TTTAGCCCGAGCCTA TERM 154 140559 - 140548 - f 75 -7.2 -4.08767 | GCGAGGGTTCCAAAA GCGC TTGA GCGC CCGATACTCCAAGGA TERM 155 141458 - 141407 - f 100 -14.6 -4.30719 | opp_overlap 141388 141418, overlap 141408 TTTTTCTACAAGAAA CGACCCTATAATTCCTGGGGTGGG ATTA CCCACTACAGAAATTATAGAGCCA AAGCATTCCAAAGTC TERM 156 141457 - 141408 - f 100 -15.9 -3.1811 | opp_overlap 141388 141418, overlap 141407 TTTTCTACAAGAAAC GACCCTATAATTCCTGGGGTGGG ATTA CCCACTACAGAAATTATAGAGCC AAAGCATTCCAAAGT TERM 157 141492 - 141461 - f 75 -8.1 -3.75193 | opp_overlap 141462, overlap 141462 141464 AATTATAGAGCCAAA GCATTCCAAAGTC TTGTCT GACTCTGGAATGT TTTCTGTTCACAGTT TERM 158 141462 - 141491 + F 100 -9.4 -4.66938 | opp_overlap 141461 141462 141464 ATTATAGAGCCAAAG CATTCCAAAGTC TTGTCT GACTCTGGAATG TTTTCTGTTCACAGT TERM 159 141491 - 141462 - f 83 -11.6 -2.84393 | opp_overlap 141462, overlap 141461 141464 ATTATAGAGCCAAAG CATTCCAAAGTC TTGTCT GACTCTGGAATG TTTTCTGTTCACAGT TERM 160 143496 - 143522 + G 76 -11 -2.50859 | overlap 143495 143493 143490 TATCGGATTTATTGT ATATTCCTTCTG ATA CAGAAGGAATAC CTATGTGTGTTTTAG TERM 161 143739 - 143727 - g 71 -4.9 -4.58698 | opp_overlap 143732, overlap 143732 GTAAATCAAAAATAA GAAAA CAT TTTTC TGTGCAAAAAATGTT TERM 162 143752 - 143732 - g 72 -3.4 -5.16681 | opp_overlap 143732, overlap 143727 TCAAAAATAAGAAAA CATTTTTC TGTGC AAAAAATG TTTGTAGAAACCATG SPD_0138 142604 - 143809 + | glycosyl transferase, group 1 family protein SPD_0139 143802 - 144755 + | glycosyl transferase, group 2 family protein SPD_0140 144765 - 146381 + | ABC transporter, ATP-binding protein TERM 163 146634 - 146688 + F 100 -28.4 -4.27686 | opp_overlap 146638 AATATCCCAATCTTA TGAACTGCACCCCAAAAGTTAGAT TTATTCT GTCTAACTTTTGGGGTGCAGTTCA TTTTGCATAGTTTTG TERM 164 146684 - 146638 - f 100 -22.7 -3.18681 | opp_overlap 146634 TCCCAATCTTATGAA CTGCACCCCAAAAGTTAGA TTTATTCTG TCTAACTTTTGGGGTGCAG TTCATTTTGCATAGT SPD_0141 146691 - 147158 + | hypothetical protein TERM 165 147605 - 147617 + G 70 -3.4 -4.88736 | overlap 147596 147601 CTTTCACTTGGTGAC CATG TTGAT CATG TTTTTGTGAATAGTA SPD_0142 147164 - 147919 + | hypothetical protein TERM 166 148749 - 148730 - g 84 -2.2 -5.73672 | overlap 148733 AAACAATTAAAAAAA GAATTTAT AGAA ATAAATGC CCCAGTGATAGAAGC SPD_0143 147932 - 149104 + | UDP-glucose 6-dehydrogenase, putative TERM 167 149359 - 149391 + F 71 -6.3 -4.14511 | TTCTATTTAGAACGA GGATTGAGTTCTGTA TTG TACAAGGCTCGGTCC TTTTAGAGTCAGCTT TERM 168 149399 - 149415 + F 80 -6.5 -4.65895 | CTCGGTCCTTTTAGA GTCAGCT TAA GGCTGGC TTTTTCAATCACCAA TERM 169 149792 - 149773 - g 77 -10.8 -2.82516 | opp_overlap 149775, overlap 149775 TTGCCCATCAGGATA TAGCTGCT TTAG AGCAGCTA TTGGAGGAAGTTGAT TERM 170 149896 - 149884 - g 70 -3.4 -4.9448 | ATTCACTAAATAAAA GCTA CCCAC TAGC AGAGGAGGATAGCGA TERM 171 150285 - 150261 - g 79 -5.8 -4.93547 | GGAAGCAATCAAAAA GAGATTGAAC GCTTT ATCCAATCTC TGCAGGTATTAGAAA SPD_0144 149499 - 150362 + | transcriptional regulator SPD_0145 150653 - 150886 + | hypothetical protein SPD_0146 150908 - 151585 + | CAAX amino terminal protease family protein SPD_0147 151597 - 152262 + | CAAX amino terminal protease family protein SPD_0148 152334 - 153560 + | transporter, major facilitator family protein TERM 172 153588 - 153603 + F 95 -9 -4.93296 | ATAATATATGTTTGA GACTGG ATTG CCAGTC TTTTTATGATGGTCA SPD_0149 153893 - 154366 + | hypothetical protein TERM 173 155134 - 155111 - g 72 -9 -3.30159 | CCAAGGTTTGGACAA CTTGAAAGTT ATCG AACTTCCAAG CGACCAACAACCGTA SPD_0150 154470 - 155300 + | ABC transporter, substrate-binding protein SPD_0151 155454 - 156308 + | lipoprotein TERM 174 156320 - 156344 + F 73 -7.9 -3.79162 | opp_overlap 156319 GTAATAAGAAACAGG GAGGTGGGA GAGAAAA TTCCACCTC TTGCTTTTGTATAGA SPD_0152 156408 - 157781 + | hypothetical protein SPD_0153 157774 - 158835 + | ABC transporter, ATP-binding protein SPD_0154 158837 - 159529 + | ABC transporter, permease protein, putative TERM 175 159554 - 159527 - T 87 -10 -3.93984 | opp_overlap 159534, overlap 159534 AAATTGAGCCATAAA TAAAAAAGAGCC GCGT GGCTCTTTTTAA CTGATCAGATTTTCT TERM 176 159547 - 159534 - T 93 -8.1 -5.72622 | opp_overlap 159534, overlap 159527 GCCATAAATAAAAAA GAGCC GCGT GGCTC TTTTTAACTGATCAG TERM 177 159534 - 159547 + T 86 -8.1 -4.68593 | opp_overlap 159534 159527 GCCATAAATAAAAAA GAGCC GCGT GGCTC TTTTTAACTGATCAG SPD_0155 160128 - 159559 - | hypothetical protein SPD_0156 160263 - 160877 + | hypothetical protein SPD_0157 160879 - 162525 + | sensor histidine kinase, putative TERM 178 163668 - 163680 + G 72 -9.1 -3.33151 | opp_overlap 163668 163667, overlap 163667 163676 AAACAACGTATTAAG GCTGC CCA GCAGC TCTTGCTTTCAACCA SPD_0158 162537 - 163823 + | DNA-binding response regulator TERM 179 164164 - 164150 - g 81 -7.2 -4.56597 | opp_overlap 164149 CCTTGTTCGTAAAAA TTTGCA ATA TGCAAA CTATACTTACGTTGG SPD_0159 163875 - 164408 + | hypothetical protein TERM 180 164423 - 164451 + F 90 -8.3 -5.32944 | opp_overlap 164423 164426, overlap 164426 AGTATTGACAAAAAA GAACTATCAAGAT ACA ATCTTGGTAGTTG TTTTTTGATTATAGA TERM 181 164451 - 164423 - f 84 -6.1 -5.28778 | opp_overlap 164423 164426, overlap 164426 AGTATTGACAAAAAA GAACTATCAAGAT ACA ATCTTGGTAGTTG TTTTTTGATTATAGA TERM 182 164448 - 164426 - f 83 -7.8 -4.73105 | opp_overlap 164426 164423, overlap 164423 ATTGACAAAAAAGAA CTATCAAGAT ACA ATCTTGGTAG TTGTTTTTTGATTAT TERM 183 164426 - 164448 + F 100 -10 -4.73828 | opp_overlap 164423 164426, overlap 164423 ATTGACAAAAAAGAA CTATCAAGAT ACA ATCTTGGTAG TTGTTTTTTGATTAT SPD_0160 164486 - 164956 + | hypothetical protein TERM 184 165086 - 165105 + T 73 -3.6 -5.1287 | overlap 165088 165103 AGTTCTTATAAGAGG TGGTTGAA GTTG TTCAACTG TTTTTTGAGTATAAA TERM 185 165178 - 165143 - T 80 -4.8 -5.2166 | gap 1, opp_overlap 165143 TAAGAACGTAAAAAA GCATAAGTTC-AGGTCT TCA AAACCTTGTTCTTATGC TTTTTATCATAGAAA SPD_0161 166511 - 165249 - | hypothetical protein TERM 186 166585 - 166575 - R 72 -2.6 -5.26918 | ATATTCTACAAAAAA TTTT GGA AAAA TGCAAGAATATTTTG TERM 187 166800 - 166781 - R 93 -7.9 -5.40464 | opp_overlap 166780 166775 166781 CAGGATAAAGAAAAA CCGAGAA GTTTCT TTCTCGG ATTTGCTTATTATGA TERM 188 166781 - 166800 + r 71 -8.6 -3.06276 | opp_overlap 166781, overlap 166780 166775 CAGGATAAAGAAAAA CCGAGAAG TTTC TTTCTCGG ATTTGCTTATTATGA SPD_0162 167279 - 166821 - | hypothetical protein TERM 189 166983 - 166959 - G 72 -9.3 -3.28497 | overlap 166963 CCAGTGGAAAGGGAA CCAACCAGCAA GAG TTGCTAGTGGG ACAAAGCCAGCCAGC SPD_0163 167716 - 167276 - | hypothetical protein TERM 190 167446 - 167436 - G 70 -5.4 -4.41241 | GAAATTTGGATAAAA TTGC TTG GCAA GAGTTTAAGAACCTG TERM 191 167977 - 167994 + G 71 -4.1 -4.86029 | ATGTGGAGGGATTGG GCTCC TATGTGGT GGAGC TTTTCTGTTCTTTCT SPD_0164 167832 - 168011 + | hypothetical protein TERM 192 168108 - 168090 - g 70 -8.9 -3.11634 | TCTCATATTATTGAA TTGCCAG AGATG CTGGCAA ACCAAATCGCAGCTG TERM 193 169305 - 169293 - g 80 -7.7 -4.31379 | overlap 169287 ACCAAGCCAGCAAAA CTGCA TTT TGCAG AGAGAAAGCCTGCTA mutL 168072 - 170021 + | DNA mismatch repair protein TERM 194 170109 - 170058 - T 85 -12.1 -3.1012 | gap 2, opp_overlap 170064, overlap 170064 AAATTTTCAAAATCA GA-AAAACGCATAAAATC-AGGTGT TCAA AAACCTTGATTTTATGCGTTTTATC ATAGAAATATTTACT TERM 195 170102 - 170064 - T 100 -11.3 -5.09245 | gap 1, opp_overlap 170064, overlap 170058 TCAAAATCAGAAAAA CGCATAAAATC-AGGTGT TCAA AAACCTTGATTTTATGCG TTTTATCATAGAAAT TERM 196 170064 - 170102 + T 100 -13.5 -4.4648 | gap 1, opp_overlap 170058 170064 TCAAAATCAGAAAAA CGCATAAAATCAGGTGTT CAAA AAC-CTTGATTTTATGCG TTTTATCATAGAAAT TERM 197 170202 - 170184 - T 77 -10.4 -2.52635 | opp_overlap 170183 170180, overlap 170183 AGTTTTATCAGTAAT CTCAAAAC AGT GTTTTGAG CTAATTTTGCCAGTT ribH 170813 - 170346 - | 6,7-dimethyl-8-ribityllumazine synthase ribB 172019 - 170814 - | 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II ribE 172674 - 172039 - | riboflavin synthase subunit alpha ribD 173759 - 172659 - | riboflavin biosynthesis protein RibD TERM 198 173691 - 173711 + g 82 -6.1 -4.86033 | GCCGACCATAGGATT GGGGTTG ACGTAAC CAGCCCC TTTTTGTGCCAGTTT TERM 199 173809 - 173778 - H 100 -11.8 -5.03715 | ACTACCTCCAAAAAA TATACCTTGAATAG GGGA CTACTCAAGGCATA CAAAAGAAAACTTAT TERM 200 173871 - 173839 - H 100 -14.4 -5.1356 | TGCGATTAACAAAAA TGCTCTGAAATGAC AAGTA ATCATTTCAGAGCA CGCAAAAAGCACAAA TERM 201 174542 - 174518 - g 80 -6.4 -4.6635 | overlap 174520 AAATTGGCAAGAAAA CAGCCCAGCA GATGG TGCTGGACTT GGAAGGCAAGGTAGT TERM 202 174540 - 174520 - g 79 -9 -3.93768 | overlap 174518 ATTGGCAAGAAAACA GCCCAGCA GATGG TGCTGGAC TTGGAAGGCAAGGTA ruvA 174163 - 174756 + | Holliday junction DNA helicase motor protein TERM 203 175008 - 175022 + G 73 -10 -2.90723 | opp_overlap 175007 TGAATTGGAAGCCAT GCTGGA GAA TCCAGC TATCATTCGAAATAG tag 174766 - 175329 + | DNA-3-methyladenine glycosylase I SPD_0172 175326 - 176003 + | hypothetical protein TERM 204 176137 - 176156 + T 80 -6.4 -4.7458 | opp_overlap 176137 AATACCGAGAAAAAA GCTGAGAA ACTT TTCCCAGC TTTATTTGTTATAGT TERM 205 176156 - 176137 - T 95 -8.6 -5.30686 | opp_overlap 176137 AATACCGAGAAAAAA GCTGAGAA ACTT TTCCCAGC TTTATTTGTTATAGT SPD_0173 177189 - 176158 - | MccC family protein TERM 206 177443 - 177399 - R 76 -4.4 -5.20154 | gap 1, opp_overlap 177404 177405 177411, overlap 177411 ATATAACTCAAAAAA GTAAGTGA-AAAAGCAACCGC ACCT GCAGTTGCTTTTATCGTTTTC TTATTCTTGATAGCG TERM 207 177404 - 177438 + r 88 -7.3 -5.00467 | gap 1, opp_overlap 177399 177411, overlap 177405 177411 ACTCAAAAAAGTAAG TGA-AAAAGCAACCGC ACCT GCAGTTGCTTTTATCG TTTTCTTATTCTTGA TERM 208 177405 - 177437 + r 77 -8.6 -3.58654 | gap 1, opp_overlap 177399 177411, overlap 177404 177411 CTCAAAAAAGTAAGT GA-AAAAGCAACCGC ACCT GCAGTTGCTTTTATC GTTTTCTTATTCTTG TERM 209 177430 - 177411 - R 100 -10 -4.788 | opp_overlap 177405 177404 177411, overlap 177399 AAAGTAAGTGAAAAA GCAACCGC ACCT GCAGTTGC TTTTATCGTTTTCTT TERM 210 177411 - 177430 + r 83 -7.8 -4.71401 | opp_overlap 177411 177399, overlap 177405 177404 AAAGTAAGTGAAAAA GCAACCGC ACCT GCAGTTGC TTTTATCGTTTTCTT SPD_0174 178148 - 177444 - | hypothetical protein SPD_0175 179083 - 178139 - | magnesium transporter, CorA family protein uvrA 179215 - 182046 + | excinuclease ABC subunit A TERM 211 182380 - 182406 + G 85 -12.4 -3.22858 | overlap 182380 182381 TGCAGGTTTGGACTT GCTTCCACAAAC TCA GTTTGTGGAAGG TCTTCGTATGATTAA TERM 212 182381 - 182405 + G 100 -15.9 -2.53233 | overlap 182380 182380 GCAGGTTTGGACTTG CTTCCACAAAC TCA GTTTGTGGAAG GTCTTCGTATGATTA SPD_0177 182039 - 183100 + | peptidase M24 family protein spxA 183232 - 183630 + | transcriptional regulator Spx TERM 213 183620 - 183607 - f 73 -8.1 -3.543 | opp_overlap 183604 GTAGAAAATGCAGAA GCACG TTTG CGTGC AGCTCTATAAACATC TERM 214 183638 - 183658 + F 93 -9.7 -4.10559 | opp_overlap 183638 183635 183634 CTCTATAAACATCAA GGCTGGGAG CAC TTCCCAGTC TTATTCTATTTTAAT TERM 215 183778 - 183762 - g 78 -2.9 -5.36441 | TGCGGACAGAAAAAA GAAACTG GAC CAGCTAC AAAAACAGAAAAAGA SPD_0179 183696 - 184265 + | hypothetical protein SPD_0180 184352 - 184618 + | hypothetical protein SPD_0181 184622 - 185041 + | Holliday junction resolvase-like protein SPD_0182 185057 - 185362 + | hypothetical protein TERM 216 185417 - 185429 + F 71 -5.5 -4.58283 | GGGGAAGAGTTGGAA CGTCC AGT GGATG TTTTTAGCCCAGTTC TERM 217 185616 - 185628 + F 71 -5.5 -4.62783 | GGGGAAGGGTTGGAA CGTCC AGT GGATG TTTTTAGCCTAGCTC TERM 218 185733 - 185754 + F 77 -5.8 -4.66002 | opp_overlap 185733 GCTAACCAGGTAAGA GGTCGGGA CGAAAA TCCTGGCC TTGTTTTTATTAGTA folC 185813 - 187069 + | folylpolyglutamate synthase TERM 219 187180 - 187196 + G 76 -6.6 -4.43815 | AGATTCACACTTTCT CTTGCT TCTCT AGCAAG TTTTAGTCTCTTAGT SPD_0184 187153 - 187584 + | hypothetical protein TERM 220 187603 - 187619 + F 95 -8.7 -5.10154 | opp_overlap 187602 187595 187603 TATGCAAGTAGAAAG GGCTGGA TTT TTCAGCC TTTTTACTTTTACCT SPD_0185 187730 - 189262 + | cardiolipin synthetase TERM 221 190849 - 190861 + G 86 -9.1 -4.4017 | overlap 190848 AAGAGTGAGCGCTTG TCGCC ATC GGCGA TTTTGTCCCCGTTGC SPD_0186 189520 - 191058 + | competence-induced protein Ccs4 TERM 222 191958 - 191946 - g 82 -6.3 -4.83593 | AAGAATTATCAAAAA CATCT CAA AGATG CAGAAGAGTGGGTAT nrdD 191178 - 193385 + | anaerobic ribonucleoside triphosphate reductase SPD_0188 193397 - 193537 + | hypothetical protein TERM 223 193562 - 193535 - f 86 -5.6 -5.70522 | opp_overlap 193540, overlap 193542 AAGAACAAGAAAAAA TAAAAGTGAGAG CCAG CTCTCGCTTTTC TCATAGTGGGAGGTA TERM 224 193540 - 193557 + F 82 -7.7 -4.4891 | opp_overlap 193535 193542 CAAGAAAAAATAAAA GTGAGAG CCAG CTCTCGC TTTTCTCATAGTGGG SPD_0189 193581 - 194087 + | acetyltransferase, GNAT family protein nrdG 194080 - 194670 + | anaerobic ribonucleoside-triphosphate reductase activating protein SPD_0191 194667 - 195284 + | hypothetical protein TERM 225 195376 - 195407 + F 79 -8 -4.01089 | opp_overlap 195378 195382, overlap 195378 195382 AAACGAAAAAACAGC AACAAATCCCTTGC AATC GCAGGGGCTTTGTG TTATTCTATTATGGT TERM 226 195378 - 195405 + F 86 -10.6 -3.58527 | opp_overlap 195378 195382, overlap 195376 195382 ACGAAAAAACAGCAA CAAATCCCTTGC AATC GCAGGGGCTTTG TGTTATTCTATTATG TERM 227 195405 - 195378 - f 73 -8.4 -3.67898 | opp_overlap 195378 195376 195382, overlap 195382 ACGAAAAAACAGCAA CAAATCCCTTGC AATC GCAGGGGCTTTG TGTTATTCTATTATG rpsJ 195551 - 195859 + | 30S ribosomal protein S10 TERM 228 196646 - 196618 - g 70 -5.4 -4.37092 | gap 1, overlap 196621 196637 AGTTGTTCCAGAAAA GAACGTTATCCTT ATCA AAGG-TAACGTAC CAGGTGCTAAGAAAT rplC 196076 - 196702 + | 50S ribosomal protein L3 rplD 196727 - 197350 + | 50S ribosomal protein L4 rplW 197350 - 197646 + | 50S ribosomal protein L23 rplB 197664 - 198497 + | 50S ribosomal protein L2 TERM 229 198524 - 198505 - f 82 -8.6 -4.05319 | AGAAATAATATTAAA CTAGTCGC TTAA GCAACTAG TAAATCCGCCAGCTC rpsS 198601 - 198882 + | 30S ribosomal protein S19 rplV 198894 - 199238 + | 50S ribosomal protein L22 TERM 230 199405 - 199383 - g 71 -4.8 -4.58685 | opp_overlap 199374 199387 199388, overlap 199388 AAATTCGTTCAAAAA GAACTTGCTG ACG CAGCAGTTTC AACTATTGAAATCGA rpsC 199251 - 199904 + | 30S ribosomal protein S3 rplP 199908 - 200321 + | 50S ribosomal protein L16 TERM 231 200405 - 200391 - g 73 -7.8 -3.9461 | overlap 200367 200392 CTTTCTCAAGAAGAA CTCGCG AAG CGCGAA AACGAATTGAAAAAA rpmC 200331 - 200537 + | 50S ribosomal protein L29 rpsQ 200562 - 200822 + | 30S ribosomal protein S17 rplN 200848 - 201216 + | 50S ribosomal protein L14 TERM 232 201258 - 201234 - f 71 -8.5 -3.12942 | opp_overlap 201234 201233, overlap 201231 201232 TTTAGGAACAAACTA GTCCCCTAGCT TCA AGCTAGGGTGC CCTTATGGGCGTAAG rplX 201294 - 201599 + | 50S ribosomal protein L24 TERM 233 201595 - 201579 - f 74 -2.2 -5.55769 | opp_overlap 201579 CGCTACAACAAAAAA TCAGGC GAAGT GCTTGA TTAATCACGAAGGAA rplE 201623 - 202165 + | 50S ribosomal protein L5 rpsN 202183 - 202452 + | 30S ribosomal protein S14 TERM 234 203034 - 203007 - g 85 -5.6 -5.24129 | CGTGTCTACAAAAAA CGTGAAGACCTT CCAA AAGTTCTTAACG GACTTGGAATTGCCA rpsH 202737 - 203135 + | 30S ribosomal protein S8 rplF 203327 - 203863 + | 50S ribosomal protein L6 TERM 235 203901 - 203855 - f 87 -10.5 -3.78677 | gap 2, opp_overlap 203862 203864 203865, overlap 203853 203864 203865 AAAGAAGGTAAAACA GGTAAATAATGTTGAGTGGTTGA TCA TCAACCAC-CAAC-CTATTTTCC AACTTTGTGCATAGC TERM 236 203864 - 203893 + F 77 -8.7 -3.68071 | gap 1, opp_overlap 203855 203853 203864 203865, overlap 203862 203865 AAAACAGGTAAATAA TGTTGAGTGGTTGA TCA TCAACCAC-CAACC TATTTTCCAACTTTG TERM 237 203893 - 203864 - f 82 -8.7 -4.03611 | gap 1, opp_overlap 203864 203862 203865, overlap 203855 203853 203865 AAAACAGGTAAATAA TGTTGAGTGGTTGA TCA TCAACCAC-CAACC TATTTTCCAACTTTG TERM 238 203865 - 203892 + F 84 -12.2 -2.8012 | gap 1, opp_overlap 203864 203855 203853 203865, overlap 203864 203862 AAACAGGTAAATAAT GTTGAGTGGTTGA TCA TCAACCAC-CAAC CTATTTTCCAACTTT TERM 239 203892 - 203865 - f 85 -12.2 -3.0054 | gap 1, opp_overlap 203865 203864 203862, overlap 203864 203855 203853 AAACAGGTAAATAAT GTTGAGTGGTTGA TCA TCAACCAC-CAAC CTATTTTCCAACTTT rplR 203947 - 204303 + | 50S ribosomal protein L18 rpsE 204321 - 204815 + | 30S ribosomal protein S5 rpmD 204829 - 205011 + | 50S ribosomal protein L30 TERM 240 205060 - 205008 - f 82 -8.8 -4.0802 | opp_overlap 205005 205012 205059, overlap 205012 205016 205052 205058 AGTTGAAGAAGTAAA CTA-ATGAAGTTTTAGGGGATGTGCA CTG TAC-CATCCCCTAAAACTAGATATAG TCATCTATGATGACA TERM 241 205012 - 205055 + F 76 -9.8 -2.85606 | gap 1, opp_overlap 205012 205008 205016 205052, overlap 205005 GAAGAAGTAAACTAA TGAAGTTTTAGGGGAT-GTGC ACT GTACCATCCCCTAAAACTAGA TATAGTCATCTATGA TERM 242 205055 - 205012 - f 82 -9.8 -3.65261 | gap 1, opp_overlap 205005 205012, overlap 205008 205016 205052 GAAGAAGTAAACTAA TGAAGTTTTAGGGGATGTGCA CTG TAC-CATCCCCTAAAACTAGA TATAGTCATCTATGA TERM 243 205051 - 205016 - f 100 -15 -3.51804 | gap 1, opp_overlap 205012 205005, overlap 205012 205008 AAGTAAACTAATGAA GTTTTAGGGGATGTGCA CTG TAC-CATCCCCTAAAAC TAGATATAGTCATCT TERM 244 205074 - 205060 - f 71 -8.6 -3.10531 | opp_overlap 205005 205059, overlap 205052 205058 CTAAAACTAGATATA GTCATC TAT GATGAC ATCGTATAGGCGAGT rplO 205156 - 205596 + | 50S ribosomal protein L15 secY 205609 - 206919 + | preprotein translocase subunit SecY TERM 245 206944 - 206922 - f 100 -12.2 -4.92791 | overlap 206934 CAGAACAGAATAAAA GTATTTACTG AAT CAGTAAATAC TGAGGGAGTGGAGGT TERM 246 206950 - 206996 + F 71 -6.7 -4.1922 | gap 1, opp_overlap 206965, overlap 206946 CAGTAAATACTGAGG GAGTGGAGGTTTAAACTCTGAC ATTT GTAAGAGTT-GGATCTCCCCTC TTCTATTTTGTTTTT adk 207070 - 207708 + | adenylate kinase infA 207825 - 208043 + | translation initiation factor IF-1 rpsM 208202 - 208567 + | 30S ribosomal protein S13 rpsK 208585 - 208968 + | 30S ribosomal protein S11 TERM 247 209855 - 209845 - g 79 -5.4 -4.9792 | GATTTGACAGAAAAA TCTG AAG CAGA GATGATGAAAGTACG rpoA 209011 - 209946 + | DNA-directed RNA polymerase subunit alpha rplQ 209958 - 210344 + | 50S ribosomal protein L17 TERM 248 210462 - 210512 + F 100 -16.5 -4.80396 | opp_overlap 210462 AGTTGGGATAGTAGA CGCTTGTTTACGAAATTGTTTTT TTCTT AAGAACAACTTCGTAAGCAGGCG TTTTTGAGTATTTTC TERM 249 210512 - 210462 - f 84 -12.1 -2.8547 | opp_overlap 210462 AGTTGGGATAGTAGA CGCTTGTTTACGAAATTGTTTTT TTCTT AAGAACAACTTCGTAAGCAGGCG TTTTTGAGTATTTTC SPD_0220 210609 - 210875 + | hypothetical protein TERM 250 212401 - 212418 + F 74 -3.3 -5.22137 | overlap 212396 TAATCTCCTTCAAAA GTCGCCT GTAT GGGTGGC TTTTATTTTATCATT SPD_0222 212467 - 213159 + | phosphoglycerate mutase family protein TERM 251 213221 - 213245 + T 100 -10 -4.8048 | opp_overlap 213221 CAAGATAAGAAAAAA CAGCCGAGGG TACTC CTTTCGGCTG TTTTTGATGTGGAAA TERM 252 213245 - 213221 - T 89 -6.4 -5.64304 | gap 1, opp_overlap 213221 CAAGATAAGAAAAAA CAGCCG-AGGG TACT CCTTTCGGCTG TTTTTGATGTGGAAA SPD_0223 214254 - 213262 - | iron(III) ABC transporter, permease protein SPD_0224 214907 - 214281 - | iron(III) ABC transporter, permease protein SPD_0225 215988 - 214897 - | ABC transporter, ATP-binding protein SPD_0226 216369 - 216001 - | iron ABC transporter, iron-binding protein SPD_0227 216708 - 216514 - | iron(III) ABC transporter, iron-binding protein TERM 253 216795 - 216808 + r 73 -3.9 -5.09259 | TGTTTTGATATTCTT TGATA ACAT TATCA TTTTCTTTTGAAGTA TERM 254 217356 - 217330 - R 81 -6 -4.84017 | overlap 217317 AATTCTCTACAAAAA GAAGAATAGC CTATTTT ACTATTCTTC CGAGTGATTTCAATT SPD_0228 217537 - 217340 - | transcriptional regulator, AraC family protein SPD_0229 218388 - 217612 - | glycyl-radical enzyme activating protein family protein TERM 255 218854 - 218839 - g 83 -6.2 -5.12785 | opp_overlap 218838 CAAGCAAAAAAGAAA TGTTAC GATT GTAACA AATTCATTTTTTATA SPD_0230 218510 - 219256 + | transcriptional regulator, DeoR family protein SPD_0231 219269 - 220249 + | transcriptional activator TERM 256 220253 - 220275 + F 93 -7.8 -5.67529 | opp_overlap 220253 220254 220256, overlap 220254 CTAGGTGAGTGAAAA TGATAGACTG ATT CAGTTTATCG TTTTTCTTTTTAGTT TERM 257 220254 - 220274 + F 85 -9.1 -3.96857 | opp_overlap 220253 220254 220256, overlap 220253 TAGGTGAGTGAAAAT GATAGACTG ATT CAGTTTATC GTTTTTCTTTTTAGT TERM 258 220635 - 220621 - g 70 -2.8 -5.01553 | AATCTACAAACAAAA TTCTTG GCA CAGGAA GCGTCTGGTACAAAG SPD_0232 220444 - 220764 + | PTS system, IIA component TERM 259 220777 - 220762 - f 80 -4.8 -5.27923 | opp_overlap 220762 GAACTTCATAAAAAA TAATAC TAGA GTATTA TCATTGTTATTAACA TERM 260 220887 - 220877 - g 73 -5.4 -4.52347 | TAAATAATATGAAAA TTGC AGC GCAA GCTAGTGGAGTTGAG SPD_0233 220810 - 221118 + | PTS system, IIB component TERM 261 221821 - 221836 + G 71 -6.2 -4.19324 | overlap 221829 TGGATCTTTGTATGG TGCAAT TGGA ATTGCA TTCTTTATATCATTT SPD_0234 221135 - 222433 + | PTS system, IIC component TERM 262 224246 - 224231 - g 73 -7.6 -4.07687 | ATTGGTCGTGGAAAA CACCTT AAAG AAGGTG GAGCAGTATATGATT pfl 222584 - 225022 + | pyruvate formate-lyase TERM 263 225582 - 225614 + G 72 -4.7 -4.67011 | opp_overlap 225571, overlap 225581 225585 ATAATGCTTTAGCTG CAGGTGCGCATGCTG TTA CAGCAGGAGCAGATG TTTTTGAATCAGCTT talC 225041 - 225709 + | fructose-6-phosphate aldolase TERM 264 226645 - 226634 - g 89 -4.4 -5.61596 | AGTTTTACAAAAAAA TTGG TATG CCAA CAACTCTAAAAGAAA gldA 225727 - 226815 + | glycerol dehydrogenase TERM 265 226824 - 226848 + F 93 -8.7 -4.75472 | opp_overlap 226824 AAAATAAACAATAAG GACTACTGTTT TCC AAATGGTAGTC TTTTATTGATCTCCG TERM 266 228151 - 228122 - g 73 -7.1 -4.03078 | opp_overlap 228124, overlap 228124 GTAGCAGACTATAAA CACCAAGCCAGCC TTAA GTCTGACTTGGTT CGTACAGACCTTGCT TERM 267 228149 - 228124 - g 77 -9.7 -3.60505 | opp_overlap 228124, overlap 228122 AGCAGACTATAAACA CCAAGCCAGCC TTAA GTCTGACTTGG TTCGTACAGACCTTG TERM 268 229368 - 229356 - g 74 -6.3 -4.38927 | CTGTCACAGAACAAA TTGAG TCT CTCAA ATTCAACACAGCTAT leuS 227270 - 229771 + | leucyl-tRNA synthetase TERM 269 229864 - 229887 + F 88 -7.5 -5.17054 | opp_overlap 229857 229864, overlap 229883 229886 GAAATAAGGTAGGAA TCCTTCAGA GTAGAA TCTGGAGGA TTTTTTGAATCTTCT TERM 270 230001 - 230041 + G 73 -6.9 -4.15044 | CAAATGATTGGGGAG TCAATGGAAGGTTATACAC CAG GTGAACTGCCTTCTATTGA TTTCTTAGAAGGGCG SPD_0239 229965 - 230660 + | acetyltransferase, GNAT family protein SPD_0240 230672 - 231088 + | acetyltransferase, GNAT family protein TERM 271 231229 - 231212 - f 79 -9.1 -3.3482 | opp_overlap 231212 CAATCTCCTAATGAA GCCACCC AATC AGGTGGC TTTTTTGCGTGGTGA TERM 272 231212 - 231229 + F 90 -8.4 -5.1101 | opp_overlap 231212 CAATCTCCTAATGAA GCCACC CAATCA GGTGGC TTTTTTGCGTGGTGA TERM 273 231402 - 231421 + F 100 -9.3 -5.15381 | overlap 231417 231419 AATAATCTCCCTTAA CTCCACC CAATCA GGTGGAG TTTTTTAGCTCTATT TERM 274 231859 - 231892 + F 79 -5.3 -5.04987 | opp_overlap 231859 TCATAGGCTAGAAAA GACCCCAAGCTCA CGACCAAA TAAGCTTGAGGTC TTTTTTGACACTATT TERM 275 231892 - 231859 - f 100 -10.4 -4.41548 | opp_overlap 231859 TCATAGGCTAGAAAA GACCCCAAGCTCAC GACCAA ATAAGCTTGAGGTC TTTTTTGACACTATT TERM 276 232072 - 232089 + F 86 -4.8 -5.72622 | opp_overlap 232066 GTGCTAAACTTAGGA GTCACC CAATCA GGTGGC TTTTTTGTTTGTGGC ruvB 232129 - 233127 + | Holliday junction DNA helicase B SPD_0242 233108 - 233680 + | hypothetical protein TERM 277 233779 - 233802 + F 82 -4.5 -5.41143 | opp_overlap 233782 233784, overlap 233782 233798 TCTCCCTATAAAAAT AAAGTCGCC CAATCA GGCGGCTTA TTTTTTTGAAAAATG TERM 278 233799 - 233782 - f 75 -4.7 -4.96501 | opp_overlap 233779 233782 233798, overlap 233784 CCCTATAAAAATAAA GTCGCCC AATC AGGCGGC TTATTTTTTTGAAAA TERM 279 233782 - 233799 + F 77 -6.2 -4.79949 | opp_overlap 233782 233784, overlap 233779 233798 CCCTATAAAAATAAA GTCGCC CAATCA GGCGGC TTATTTTTTTGAAAA TERM 280 234151 - 234138 - g 73 -6.7 -4.18018 | TTTTTCTACGGAAAA CTGGA CCCG TCCAG ATCAGGAAGTCAAGT uppS 233911 - 234669 + | undecaprenyl diphosphate synthase cdsA 234678 - 235481 + | phosphatidate cytidylyltransferase TERM 281 235545 - 235574 + G 72 -8.5 -3.53444 | overlap 235551 GTTTTCGGGATTATT GTAGTGGTGCACG AGTT CGGGCACTTCTAC TTTGCCAAGAAATCA TERM 282 236224 - 236212 - g 70 -7.7 -3.61764 | TTAGCAACTGGGAAA GCTTG ATC CAAGC TGTGGAAACAGAAAC eep 235503 - 236762 + | zinc metalloprotease Eep TERM 283 238408 - 238398 - g 79 -5.4 -4.96848 | GCCTTGACAGAAAAA CTTG AAG CAAG CTTGATGGGAGCTGG proS 236775 - 238628 + | prolyl-tRNA synthetase TERM 284 238680 - 238650 - f 72 -2.7 -5.24416 | opp_overlap 238650 TAATCAGAAGAAAAA CAAGGAAAAAA TGTAACTAG TTTTTACCTTG TTTTTTCTGTATAAT TERM 285 238650 - 238680 + F 77 -3.4 -5.43414 | opp_overlap 238650 TAATCAGAAGAAAAA CAAGGAAAAAAT GTAACTA GTTTTTACCTTG TTTTTTCTGTATAAT SPD_0247 238728 - 240107 + | glycosyl hydrolase, family protein 1 TERM 286 240144 - 240112 - f 75 -8.5 -3.37188 | opp_overlap 240114, overlap 240111 240114 ATGGATTTTAAAAAG GACTCTGACTGATTA TCC CAATCGGTCAGAGTT TTTTGCTTACAGGAG TERM 287 240142 - 240114 - f 86 -11.1 -3.25166 | opp_overlap 240114, overlap 240112 240111 GGATTTTAAAAAGGA CTCTGACTGATTA TCC CAATCGGTCAGAG TTTTTTGCTTACAGG TERM 288 240114 - 240142 + F 100 -12.6 -5.26875 | opp_overlap 240112 240111 240114 GGATTTTAAAAAGGA CTCTGACTGATT ATCCC AATCGGTCAGAG TTTTTTGCTTACAGG TERM 289 240557 - 240573 + G 80 -6.5 -4.73864 | overlap 240565 AATGCTCACCCACAC CGCTCTG AGA CAGAACG TTTTGTCTTGGTTCA glmS 240299 - 242107 + | D-fructose-6-phosphate amidotransferase TERM 290 242117 - 242132 + F 77 -5.4 -4.91109 | opp_overlap 242117 242119 GAATAAGCTAAAAAA GTCTAG TTAT CTAGGC TTTTTCTAATGAGCA TERM 291 242132 - 242117 - f 74 -3.2 -5.2166 | opp_overlap 242117, overlap 242119 GAATAAGCTAAAAAA GTCTAG TTAT CTAGGC TTTTTCTAATGAGCA SPD_0249 242226 - 243275 + | hypothetical protein TERM 292 243303 - 243283 - T 84 -5.5 -5.45652 | AGGCTTAATAAAAAA TCCTAATCA AGT TTATTAGGA CAACAAATATTGTAC TERM 293 243328 - 243353 + T 100 -12.6 -4.96848 | opp_overlap 243328 243324 TTGTACGAAAATTAA TCCCCCGAGC TATAAT GCTTGGGGGA TTTTTCTATAGGAGG TERM 294 243353 - 243328 - T 87 -10.4 -3.71672 | opp_overlap 243328, overlap 243324 TTGTACGAAAATTAA TCCCCCGAGC TATAAT GCTTGGGGGA TTTTTCTATAGGAGG TERM 295 243365 - 243383 + T 95 -6 -6.04324 | GGGATTTTTCTATAG GAGGGCTA GTT TAGTTCTC TTTTTTATTTTTTAG SPD_0250 247145 - 243375 - | pullulanase, extracellular TERM 296 246847 - 246857 + g 76 -3.2 -5.35365 | GTAGAAGTAGTTGGC TCTG TTG CAGG TTTTTCTTCTGTTTT rpsL 247562 - 247975 + | 30S ribosomal protein S12 TERM 297 248357 - 248341 - g 79 -9.5 -3.68024 | GTGGTGAACACACAA TGCAAGA CCG TCTTGCA AAAGAAATCTTGGAT rpsG 247995 - 248465 + | 30S ribosomal protein S7 TERM 298 248807 - 248827 + F 100 -9.7 -5.08601 | opp_overlap 248807, overlap 248826 TGAAAACATTGAGAA CGGGTAGGT CCT GCCTATCCG TTTTTATTAAAATCG fusA 248890 - 250971 + | elongation factor G TERM 299 250983 - 250960 - f 71 -3.1 -5.06961 | overlap 250961 ATTAAGAAAAATAAA GGTGAAGAC TAATCC GTCCTCACT CTAGAAGGAAGTCAC TERM 300 250985 - 251015 + F 90 -12 -3.35597 | opp_overlap 250990 250994, overlap 250990 AATCCGTCCTCACTC TAGAAGGAAGTCAC TTA GTGGCTTCCTTTTG TCTTTAGAAAATACC TERM 301 251010 - 250990 - f 79 -9.7 -3.32844 | opp_overlap 250990 250985, overlap 250994 GTCCTCACTCTAGAA GGAAGTCAC TTA GTGGCTTCC TTTTGTCTTTAGAAA TERM 302 250990 - 251010 + F 100 -11.9 -4.78848 | opp_overlap 250990 250994, overlap 250985 GTCCTCACTCTAGAA GGAAGTCAC TTA GTGGCTTCC TTTTGTCTTTAGAAA TERM 303 251687 - 251663 - g 76 -9.3 -3.67597 | overlap 251673 CGTGCTATGGAACAA CTGGAGCAGAT GGC ACCTCCTCCAG CGGAAGAGAAACCAG TERM 304 252923 - 252911 - g 85 -5.5 -5.252 | GATTCTTACAAAAAA GCTCG GAT CAAGC ATGCGACCATCTATG polC 251075 - 255466 + | DNA polymerase III PolC TERM 305 255495 - 255525 + F 79 -5.5 -5.20735 | opp_overlap 255495 255494 255492 AATCTATTAGAAGAG GCTAACGTATATC CAATA GATTTACATTAGC TTTCTTTTTTGTTAA SPD_0255 255568 - 255831 + | hypothetical protein TERM 306 256015 - 256025 + G 79 -6.8 -4.61873 | TGAATGCCATACCCA GCCA GAT TGGC TTTTGGTTTATAAAG SPD_0256 255824 - 256102 + | hypothetical protein SPD_0257 256123 - 256275 + | hypothetical protein pepS 256297 - 257538 + | aminopeptidase PepS SPD_0259 257548 - 257778 + | hypothetical protein TERM 307 257884 - 257872 - f 71 -7.7 -3.58905 | AGGTTGCAGATAGAA CTGAC GAA GTCAG CTAAAAACACTGTTT TERM 308 257929 - 257917 - f 71 -7.7 -3.58905 | AGGTTGCAGATAGAA CTGAC GAA GTCAG CTAAAAACACTGTTT TERM 309 257974 - 257962 - f 71 -7.7 -3.58905 | AGGTTGCAGATAGAA CTGAC GAA GTCAG TAACATATATACGGC TERM 310 258072 - 258037 - f 73 -9.1 -2.90307 | opp_overlap 258042, overlap 258042 TGAAGAGTATGAAAC GAAAAGGAGGTTGGT CATTGT ACCAGCCTCCTTTTG ATATGATATAATAGT TERM 311 258042 - 258067 + F 100 -11.2 -4.38171 | opp_overlap 258037 258042 AGTATGAAACGAAAA GGAGGTTGGT CATTGT ACCAGCCTCC TTTTGATATGATATA TERM 312 258067 - 258042 - f 89 -9 -4.59376 | opp_overlap 258042, overlap 258037 AGTATGAAACGAAAA GGAGGTTGGT CATTGT ACCAGCCTCC TTTTGATATGATATA rsuA-1 258091 - 258813 + | ribosomal small subunit pseudouridine synthase A TERM 313 258932 - 258967 + F 90 -8.4 -5.32565 | gap 1, opp_overlap 258913 258939 CGAAGAGTATAAATT CGAAAAAGGTGAGGGAC AAT GTCC-TCGCCTTTTATG TTTTTTAGTTGCTTC TERM 314 258960 - 258939 - f 72 -5.1 -4.72486 | gap 1, opp_overlap 258932 TATAAATTCGAAAAA GGTGAGGGAC AAT GTCC-TCGCC TTTTATGTTTTTTAG pepC 259030 - 260364 + | aminopeptidase C TERM 315 260379 - 260404 + T 88 -6.9 -4.93547 | opp_overlap 260379 AAAGCATAGAAAAAA GGAATCAGATT TTAG AACCTGGTTCC TTTTTAGTTGCTTGA TERM 316 260404 - 260379 - T 93 -6.9 -5.43487 | opp_overlap 260379 AAAGCATAGAAAAAA GGAATCAGATT TTAG AACCTGGTTCC TTTTTAGTTGCTTGA SPD_0262 261331 - 260420 - | PTS system, mannose/fructose/sorbose family protein, IID component manM 262158 - 261355 - | PTS system, mannose-specific IIC component manL 263175 - 262186 - | PTS system, mannose-specific IIAB components TERM 317 263282 - 263294 + r 71 -3.5 -5.10968 | opp_overlap 263282, overlap 263272 TTTATCATAAAAAAT TAAAA AAT TTTTA TTTTTATATGTTGAT TERM 318 263366 - 263384 + r 100 -11.8 -4.15854 | opp_overlap 263366 ATTTAATATAAAAAA GTTGGAAG AAG CTTCCAAC TTTTAAAATAGGTTT TERM 319 263384 - 263366 - R 100 -11.8 -5.48063 | opp_overlap 263366 ATTTAATATAAAAAA GTTGGAAG AAG CTTCCAAC TTTTAAAATAGGTTT SPD_0265 264427 - 263408 - | alcohol dehydrogenase TERM 320 263725 - 263745 + g 85 -3.9 -5.68438 | CGGCAGTTACGACAG CTGAATGAG CTC CTCCATCAG TTTTTTCTTTAATGA TERM 321 264643 - 264624 - R 100 -12.2 -4.13711 | opp_overlap 264623 264620 TGAAAAGAGCACAAA GACCAGCT TGCA AGCTGGTC ATACTCTTCGAAAAT TERM 322 264709 - 264689 - R 72 -8.3 -3.35996 | overlap 264690 CAGCTTCATCTACAA CCTCAAAGC AGT GCTTTGAGC AACCTACGGCTAGCT TERM 323 264708 - 264690 - R 84 -11.8 -2.61383 | overlap 264689 AGCTTCATCTACAAC CTCAAAGC AGT GCTTTGAG CAACCTACGGCTAGC SPD_0266 265578 - 264766 - | Cof family protein TERM 324 265299 - 265311 + g 87 -4.9 -5.37043 | opp_overlap 265299 CTGAACGTTGAACCA TATCT AGC AGATA TTTTTTGTCTACAGT TERM 325 266711 - 266697 - g 77 -8.6 -3.92373 | overlap 266709 TATCGTAGCGACAAA TGGTGA AAA TCACCA ATCAGCCAAATTGGA SPD_0267 265768 - 267186 + | xanthine/uracil permease family protein TERM 326 267199 - 267213 + F 95 -8.5 -5.14563 | overlap 267194 267199 TAATAGAATGACCCA GGGGG ATTTC CCCCC TTTTTTAATACAAAA TERM 327 267199 - 267212 + F 80 -9.5 -3.68256 | overlap 267194 267199 TAATAGAATGACCCA GGGGG ATTT CCCCC CTTTTTTAATACAAA TERM 328 267375 - 267363 - g 77 -7.7 -4.19746 | opp_overlap 267363, overlap 267366 TTGACTTTAAAAGAA GTAGC CCT GCTAC AGTCAGGGCTGATAG SPD_0268 267255 - 267947 + | hypothetical protein TERM 329 267982 - 268015 + F 70 -3.9 -4.91511 | overlap 268010 GACCTCTTTCTACTA GGGAAAGATGAATGC AATC GTGTCCATCTTTTTC TTTTTATGGTAAAAT folP 268042 - 269016 + | dihydropteroate synthase TERM 330 269599 - 269585 - g 84 -10 -3.79747 | opp_overlap 269592 GCAGGTATTATCAAA CAAGGG ATG CCCTTG GTAACAGGGCGTATT SPD_0270 269018 - 270340 + | folylpolyglutamate synthase folE 270321 - 270875 + | GTP cyclohydrolase I TERM 331 270882 - 270896 + F 80 -6.4 -4.82901 | opp_overlap 270879 270882 GGGCTATAAAAAGAA TCCGTT TCA AGCGGA TTTTTCTAGAAAGGA sulD 270918 - 271730 + | bifunctional folate synthesis protein TERM 332 271771 - 271736 - T 93 -8.4 -5.41787 | opp_overlap 271728 271736 GAAAAAATAGAAAAA CTCTAGTTTTCAGTTA CTTG CAACTGAAGGCTAGAG TTTTTAAAATAGGTC TERM 333 271736 - 271771 + T 100 -12.1 -4.62783 | opp_overlap 271736, overlap 271728 GAAAAAATAGAAAAA CTCTAGTTTTCAGTT ACTTGC AACTGAAGGCTAGAG TTTTTAAAATAGGTC SPD_0273 272146 - 271775 - | hypothetical protein rplM 272449 - 272895 + | 50S ribosomal protein L13 rpsI 272915 - 273307 + | 30S ribosomal protein S9 TERM 334 273334 - 273353 + F 89 -6.4 -5.75599 | opp_overlap 273334 TACTATACTTATACA GAGCACCT TTCG GGGTGTTC TTTTTTTATACTTTC TERM 335 273490 - 273516 + F 89 -7.3 -5.25656 | opp_overlap 273490 TATCAATGTTTCAAA GCACTCAAAAG TTTAC CTTATGGGTGC TTTTTTCGTGCTTTT TERM 336 273839 - 273793 - f 93 -9 -4.8048 | gap 1, opp_overlap 273793 273795 273796, overlap 273796 GGCTCATATCAAAAA GCACCTCA-AAAAGGTATTAC CAAGTT GCAATACCTTTTATGAGGCTC TTTTGTCCTGCTCTT TERM 337 273836 - 273796 - f 87 -11.5 -3.30658 | gap 1, opp_overlap 273795 273793 273796, overlap 273793 TCATATCAAAAAGCA CCTCA-AAAAGGTATTAC CAAGTT GCAATACCTTTTATGAGG CTCTTTTGTCCTGCT TERM 338 273796 - 273836 + F 73 -9.3 -2.9043 | gap 1, opp_overlap 273796 273793, overlap 273795 273793 TCATATCAAAAAGCA CCTCA-AAAAGGTATTAC CAAGTT GCAATACCTTTTATGAGG CTCTTTTGTCCTGCT TERM 339 273982 - 273957 - f 100 -12.1 -5.26316 | opp_overlap 273957 TTAGTTCATAAAAAA CAAGTTTAGAT CCTC ATCTAAACTTG TTTTTTTAAAATTGA TERM 340 273957 - 273982 + F 100 -12.1 -5.47399 | opp_overlap 273957 TTAGTTCATAAAAAA CAAGTTTAGAT CCTC ATCTAAACTTG TTTTTTTAAAATTGA TERM 341 274292 - 274272 - g 71 -4.8 -4.54306 | gap 1, overlap 274275 TTTAAGAAAAAAATA TC-ACTTGC AGAT GCAAGTTGA ACGTTATATAGAAGA SPD_0276 273994 - 274359 + | hypothetical protein celA 274549 - 275985 + | 6-phospho-beta-glucosidase TERM 342 276019 - 275988 - f 100 -16.2 -2.8214 | opp_overlap 275992 275996, overlap 275992 275996 ATCAGTAGAATAGTA TAAACAAACTGAGA TTAT TCTCAGTTTGTTTA GCATATTGAGGTGAC TERM 343 276015 - 275992 - f 100 -12.6 -4.08571 | opp_overlap 275992 275996, overlap 275988 275996 GTAGAATAGTATAAA CAAACTGAGA TTAT TCTCAGTTTG TTTAGCATATTGAGG TERM 344 275992 - 276015 + F 95 -12.6 -3.66803 | opp_overlap 275992 275988 275996, overlap 275996 GTAGAATAGTATAAA CAAACTGAGA TTAT TCTCAGTTTG TTTAGCATATTGAGG TERM 345 276011 - 275996 - f 82 -7.6 -4.61852 | opp_overlap 275992 275996, overlap 275992 275988 AATAGTATAAACAAA CTGAGA TTAT TCTCAG TTTGTTTAGCATATT TERM 346 275996 - 276011 + F 81 -7.6 -4.4572 | opp_overlap 275996 275992 275988, overlap 275992 AATAGTATAAACAAA CTGAGA TTAT TCTCAG TTTGTTTAGCATATT SPD_0278 276037 - 276276 + | hypothetical protein celB 276406 - 276720 + | cellobiose phosphotransferase system IIB component TERM 347 277736 - 277719 - g 82 -4.2 -5.48303 | overlap 277731 ACAATGTCAAAAAAA TCAGAA GAATAT TTCTGA AGAAGTTTTAAAAAA SPD_0280 276844 - 278817 + | transcriptional regulator, putative celC 278827 - 279141 + | cellobiose phosphotransferase system IIA component SPD_0282 279160 - 279666 + | hypothetical protein TERM 348 279816 - 279801 - g 72 -9 -3.37522 | opp_overlap 279801 279800 ATGTTATGGAACCAA TGGGCA AACT TGCCCA GTTTAAAGTAGTACG TERM 349 280791 - 280805 + G 75 -5.8 -4.75174 | opp_overlap 280791 CAGCCTTATTTAATA TTAATG AAC CATTAA TTTTTGGATTACCTA celD 279746 - 281092 + | cellobiose phosphotransferase system IIC component TERM 350 281155 - 281190 + F 100 -9.2 -5.19819 | gap 1, opp_overlap 281155 281167 TGAGTGTTAACATTA GCAGTGAAGAG-ATCTT TTT AAGATATTCTTCTCTGC TTTTTCATTTTATTT SPD_0284 281474 - 281650 + | hypothetical protein TERM 351 282014 - 281997 - f 77 -5.5 -5.01845 | opp_overlap 281992 281997 CAGAATAATGAAAAA CGCATCA AAAA TGGTGCG TTCTGTTTTTATGCT TERM 352 281997 - 282014 + F 78 -7.7 -4.1472 | opp_overlap 281997, overlap 281992 CAGAATAATGAAAAA CGCATCA AAAA TGGTGCG TTCTGTTTTTATGCT TERM 353 282926 - 282940 + G 75 -2.8 -5.31158 | opp_overlap 282926 GGTTAAATGTAGAAC TAGAAG AAC CTGCTA TTTTTGATTTTTTTA SPD_0285 282052 - 284265 + | glycosyl hydrolase, family protein 31 TERM 354 284379 - 284404 + T 77 -4.7 -5.20783 | ACATAGACTTTACAA CACTTCATGTT TCAT ATCATGGGGTG TTTTTCTATTTAAGT TERM 355 284479 - 284437 - T 85 -6.6 -5.29385 | gap 1, opp_overlap 284437 284469 AAGCCAATCAAAAAA TCTCACTATTCATCAGGTT AAAGGA AACCTAATCA-TAGTGAGA TTGTGAATTATAGTA SPD_0286 284963 - 284487 - | glutathione peroxidase TERM 356 285213 - 285199 - g 75 -2.8 -5.31519 | opp_overlap 285199 285207, overlap 285207 ACATGCAAACAAAAA CAAAGA AGC TCATTG TGAGTTTGTCTTCAC TERM 357 287731 - 287760 + G 70 -9.5 -2.59028 | opp_overlap 287729, overlap 287723 CTGAAACCCAAAGTG TCTTTTTAGAATC GTCC GATTCGAAAAAGA ATATTGGTTACTTTT SPD_0287 285186 - 288389 + | hyaluronate lyase precursor TERM 358 288465 - 288440 - T 86 -4.8 -5.63645 | opp_overlap 288440 GGAAAATAGAAAAAA TCCGAAGA AGGCCAAATA TCTTCGGA TTTTTCTTTTAAAAA TERM 359 288440 - 288465 + T 83 -4.8 -5.45802 | opp_overlap 288440 GGAAAATAGAAAAAA TCCGAAGA AGGCCAAATA TCTTCGGA TTTTTCTTTTAAAAA TERM 360 288502 - 288481 - T 74 -5.9 -4.56597 | opp_overlap 288468 288482, overlap 288482 TTTTTCTTTTAAAAA GGGATAAGT TGAT ACTTATCCT TTTTTACTTCATTAT TERM 361 288501 - 288482 - T 79 -9.4 -3.33744 | opp_overlap 288468 288482, overlap 288481 TTTTCTTTTAAAAAG GGATAAGT TGAT ACTTATCC TTTTTTACTTCATTA TERM 362 288482 - 288501 + T 100 -9.4 -5.32565 | opp_overlap 288482 288481, overlap 288468 TTTTCTTTTAAAAAG GGATAAGT TGAT ACTTATCC TTTTTTACTTCATTA TERM 363 288689 - 288665 - T 82 -7.7 -4.55287 | overlap 288630 288668 288669 CGGAGCGAGACAAAA CAACCACCCGC TAT GCGGGTGCGCG TCGAAGGTTATACCA TERM 364 288686 - 288668 - T 100 -10.2 -4.38744 | overlap 288665 288669 AGCGAGACAAAACAA CCACCCGC TAT GCGGGTGC GCGTCGAAGGTTATA TERM 365 288685 - 288669 - T 93 -13.7 -3.22162 | overlap 288668 288665 GCGAGACAAAACAAC CACCCGC TAT GCGGGTG CGCGTCGAAGGTTAT TERM 366 289182 - 289160 - T 76 -7.8 -3.94184 | opp_overlap 289164, overlap 289164 ATAGTCAAGATTAAA GAAATTATCC AGT GGATGATTTC TTCACGAGTATGAAA TERM 367 289474 - 289453 - T 90 -11.5 -3.72051 | opp_overlap 289450 289448, overlap 289435 TTGAACAACGTGAAA GCCAGCGTC TTTA GGCGCTGGC TGATGATTTGGGCTT TERM 368 289501 - 289530 + T 76 -6.5 -4.56358 | gap 1, opp_overlap 289506, overlap 289506 GCTTATAGCTCTGGG ATA-AACCACCCGT TTG ACGGGTGGTTATGA TTTTATCTGAGTGTA TERM 369 289524 - 289506 - T 100 -14.6 -3.86015 | opp_overlap 289501 289506 TAGCTCTGGGATAAA CCACCCGT TTG ACGGGTGG TTATGATTTTATCTG TERM 370 289506 - 289524 + T 100 -14.6 -3.74012 | opp_overlap 289506, overlap 289501 TAGCTCTGGGATAAA CCACCCGT TTG ACGGGTGG TTATGATTTTATCTG eda 290162 - 289533 - | keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase SPD_0290 291173 - 290172 - | carbohydrate kinase, PfkB family protein SPD_0291 291845 - 291204 - | hypothetical protein SPD_0292 292679 - 291864 - | gluconate 5-dehydrogenase SPD_0293 292950 - 293384 + | PTS system, IIA component TERM 371 294401 - 294389 - g 75 -7.7 -3.98204 | opp_overlap 294397 AAAGATATTTATAAA CATGC TAT GCATG CCATGCTTCGTTCCT SPD_0294 293396 - 294586 + | glucuronyl hydrolase TERM 372 295059 - 295033 - g 78 -7.3 -4.43681 | CATTTAATACGAAAA CAACTCCAACA GGAAA TGATGGAGCTG TTCAAGTCAACATTA SPD_0295 294597 - 295088 + | PTS system, IIB component SPD_0296 295103 - 295882 + | PTS system, IIC component SPD_0297 295869 - 296687 + | PTS system, IID component yajC-1 296687 - 296980 + | preprotein translocase, YajC subunit TERM 373 296989 - 296956 - f 71 -7.7 -3.66921 | gap 1, opp_overlap 296963, overlap 296963 AAGTGTAATGGGAAA GACAAAAGAACTGCTT TTT AAGTAGTTCTTTT-TC TGGTAATAGATAATG TERM 374 296963 - 296983 + F 100 -9.1 -4.93296 | opp_overlap 296956 296963 ATGGGAAAGACAAAA GAACTGCTT TTT AAGTAGTTC TTTTTCTGGTAATAG TERM 375 296983 - 296963 - f 83 -6.9 -4.79451 | opp_overlap 296963, overlap 296956 ATGGGAAAGACAAAA GAACTGCTT TTT AAGTAGTTC TTTTTCTGGTAATAG SPD_0299 297002 - 297118 + | hypothetical protein SPD_0300 297064 - 298902 + | hypothetical protein TERM 376 299069 - 299056 - g 76 -3.1 -5.32699 | GGAAATATGAAAAAA TGTCC CAAG AGACA CGTGAAAAGATTGAA regR 298962 - 299963 + | sugar binding transcriptional regulator RegR TERM 377 300005 - 300036 + T 100 -16.1 -3.71378 | opp_overlap 300005, overlap 300008 TGTTAAGAAATAAAA TAATCCCACCTAG AACAAG CTAGGTGGGATTA TTTGCCTATGAAATG TERM 378 300036 - 300005 - T 100 -16.1 -5.09762 | opp_overlap 300005 300008 TGTTAAGAAATAAAA TAATCCCACCTAG AACAAG CTAGGTGGGATTA TTTGCCTATGAAATG TERM 379 300008 - 300033 + T 100 -13.4 -3.98913 | opp_overlap 300005, overlap 300005 TAAGAAATAAAATAA TCCCACCTAG AACAAG CTAGGTGGGA TTATTTGCCTATGAA SPD_0302 300651 - 300409 - | hypothetical protein SPD_0303 300861 - 300667 - | transcriptional regulator, putative TERM 380 300896 - 300910 + H 75 -7.2 -4.11394 | ATGTCGTATATATTT GACTAT ATT ATAGTC TTTTAAACATAAAGT TERM 381 301368 - 301382 + G 73 -2.1 -5.18726 | gap 1 TAGTCCTCAATTGGA CCAGCG TGAG CG-TGG TTTTTCTTATAAAAA mraW 301027 - 301977 + | S-adenosyl-methyltransferase MraW ftsL 301989 - 302306 + | cell division protein FtsL TERM 382 303992 - 304014 + G 74 -6.3 -4.4195 | overlap 303994 GAAAAATGGTGGTTA TCTAGTCGG GTTAA CCGACTATA TTTTCTCGGCTGTAT TERM 383 303994 - 304012 + G 79 -8.9 -3.81279 | overlap 303992 AAAATGGTGGTTATC TAGTCGG GTTAA CCGACTA TATTTTCTCGGCTGT pbpX 302310 - 304562 + | penicillin-binding protein 2X mraY 304564 - 305544 + | phospho-N-acetylmuramoyl-pentapeptide-transferase TERM 384 305551 - 305570 + F 100 -12.2 -5.20783 | opp_overlap 305549 TTGATGTAAGAATGG CACCCTGA TGTT TCAGGGTG TTTTTGTGTTTAAAT TERM 385 305856 - 305812 - f 83 -5.1 -5.47431 | opp_overlap 305827, overlap 305814 CGAAGAGATAAAAAA TATTGGTCAATTAAAGTCAAA ATA CTTGACCTTTTCTGACCAATG TAGTATATTATGAAC TERM 386 305854 - 305814 - f 81 -7.7 -4.35708 | opp_overlap 305827, overlap 305812 AAGAGATAAAAAATA TTGGTCAATTAAAGTCAAA ATA CTTGACCTTTTCTGACCAA TGTAGTATATTATGA clpL 306101 - 308206 + | ATP-dependent Clp protease, ATP-binding subunit TERM 387 308261 - 308230 - T 76 -3.7 -5.31275 | opp_overlap 308233, overlap 308233 TTTGAGGATAAAAAA GAAGGAGCCAGCT GAAAAA AACTGGTTCCTTT TTAGGTACGACAGGC TERM 388 308233 - 308258 + T 74 -5.4 -4.65895 | opp_overlap 308230 308233 GAGGATAAAAAAGAA GGAGCCAGCT GAAAAA AACTGGTTCC TTTTTAGGTACGACA TERM 389 308258 - 308233 - T 74 -5.4 -4.74611 | opp_overlap 308233, overlap 308230 GAGGATAAAAAAGAA GGAGCCAGCT GAAAAA AACTGGTTCC TTTTTAGGTACGACA luxS 308984 - 308502 - | S-ribosylhomocysteinase TERM 390 308874 - 308888 + g 74 -6.4 -4.37067 | opp_overlap 308873 GCGAATATCATAATT GGAGAT GAT GTCTCC TTTTGGTCCTGTTTC TERM 391 309069 - 309050 - R 100 -9.3 -4.6645 | overlap 309041 309043 GAGACAGAGAGAAAA CCTCTCC GAGGCT GGAGAGG TTGAAATCTTTACTT SPD_0310 310563 - 309079 - | hypothetical protein TERM 392 309489 - 309500 + g 70 -5.8 -4.46576 | ATTCAAAGGCTAGGG CTGG TCCA CCAG TTTCTTCTGCTTTTT TERM 393 310368 - 310390 + g 79 -9.2 -3.85542 | TCACAACCTCAACCT GCTCTTTCAA TTC TTGCAAGAGC TTGATTTTGTTGTCA dexB 310716 - 312323 + | glucan 1,6-alpha-glucosidase SPD_0313 312482 - 312655 + | hypothetical protein TERM 394 312674 - 312720 + F 93 -9 -4.8048 | gap 1, opp_overlap 312674 312676 312677, overlap 312677 AAGAACAAGACAAAA GAGCCTCATAAAAGGTATTGC AACTTG GTAATACCTTTT-TGAGGTGC TTTTTGATATGAGCC TERM 395 312720 - 312674 - f 73 -4.6 -4.83518 | gap 1, opp_overlap 312674 312677, overlap 312676 312677 AAGAACAAGACAAAA GAGCCTCATAAAAGGTATTGC AACTTG GTAATACCTTTT-TGAGGTGC TTTTTGATATGAGCC TERM 396 312717 - 312677 - f 74 -9.3 -2.98651 | gap 1, opp_overlap 312677 312674, overlap 312676 312674 AACAAGACAAAAGAG CCTCATAAAAGGTATTGC AACTTG GTAATACCTTTT-TGAGG TGCTTTTTGATATGA TERM 397 312677 - 312717 + F 87 -11.5 -3.30658 | gap 1, opp_overlap 312676 312674 312677, overlap 312674 AACAAGACAAAAGAG CCTCATAAAAGGTATTGC AACTTG GTAATACCTTTT-TGAGG TGCTTTTTGATATGA TERM 398 313783 - 313765 - g 83 -6 -5.02476 | overlap 313768 AGACGTTTTAAAAAA TCACGTTC ACA GAAAGTGA AGCGAAGTGTTAATA cps2A 313744 - 315189 + | integral membrane regulatory protein Cps2A cps2B 315191 - 315922 + | tyrosine-protein phosphatase CpsB cps2C 315931 - 316623 + | chain length determinant protein/polysaccharide export protein, MPA1 family protein cps2D 316633 - 317313 + | tyrosine-protein kinase Cps2D cytosolic ATPase cps2E 317328 - 318695 + | undecaprenylphosphate glucosephosphotransferase Cps2E TERM 399 318834 - 318823 - g 74 -4.4 -4.9181 | ACAGAATATCAAAAA GATG GGAA CATC CAATACTATGTTGCC cps2T 318727 - 319911 + | glycosyl transferase, group 1 family protein, putative cps2F 319904 - 320848 + | glycosyl transferase, group 2 family protein TERM 400 321104 - 321086 - g 76 -7.4 -4.18762 | AAGTTTGATTTAAAA CGGATACC AGT GGTATCAG AAAAATATATACGTG cps2G 320864 - 321910 + | glycosyl transferase, group 1 family protein csp2H 321951 - 323114 + | polysaccharide polymerase cps2I 323244 - 324401 + | glycosyl transferase, group 1 family protein, putative SPD_0325 324398 - 325807 + | hypothetical protein TERM 401 325986 - 325968 - g 71 -5.3 -4.59212 | opp_overlap 325968 AATTAATCAAAGAAA GTCACCT ATTCA AGATGAC TATATAGAGAAATAT cps2K 325843 - 327081 + | UDP-glucose 6-dehydrogenase, putative cps2P 327110 - 327715 + | UDP-galactopyranose mutase TERM 402 328045 - 328059 + G 78 -7.1 -4.33417 | CAGCCTAGTCCAGAT GGCCT TGCTC AGGCC TTTCTTATCGGTGAG cps2L 327793 - 328662 + | glucose-1-phosphate thymidylyltransferase rfbC 328663 - 329256 + | dTDP-4-dehydrorhamnose 3,5-epimerase, putative rfbB 329269 - 330318 + | dTDP-glucose 4,6-dehydratase TERM 403 330316 - 330342 + F 72 -8.2 -3.37493 | opp_overlap 330316 330322, overlap 330322 GAGATTATTACAGTA TAAAAAGCAG GAAATAG CTGCTTTTTA TTGCTATATTGGGAA TERM 404 330876 - 330854 - g 73 -10 -2.91695 | overlap 330851 GGTATTTGGAAATTA TGGCAAAAAC TTC GTTTTTACCA TGCAAAATCTTGCGA rfbD 330384 - 331235 + | dTDP-4-dehydrorhamnose reductase TERM 405 331542 - 331529 - f 71 -5.3 -4.46212 | opp_overlap 331529 CCTTTTACGAGAAAA GTTGT TAGA ACAAC CTCTTCTTCATGCGG TERM 406 332184 - 332198 + F 93 -10 -4.14243 | opp_overlap 332184 TGGGACGGAGTAAAA GAGTCC AGT GGACTC TTTTAGCCTAAGCTC TERM 407 332198 - 332184 - f 100 -10 -4.2828 | opp_overlap 332184 TGGGACGGAGTAAAA GAGTCC AGT GGACTC TTTTAGCCTAAGCTC SPD_0333 332280 - 332438 + | hypothetical protein TERM 408 332443 - 332484 + F 100 -11.9 -4.72333 | gap 1, opp_overlap 332443 AGTGCAAATAAGAAA TCTCCAGATTAG-GAACT ATCCGTG AGTTCTCTAGTCTGGAGA TTTTTCAATATACTT TERM 409 332484 - 332443 - f 100 -9.7 -4.57581 | gap 1, opp_overlap 332443 AGTGCAAATAAGAAA TCTCCAGATTAG-GAACT ATCCGTG AGTTCTCTAGTCTGGAGA TTTTTCAATATACTT TERM 410 333179 - 333165 - g 82 -8.6 -4.17556 | opp_overlap 333164 TACACTTTGAACAAA CCAGAA AGC TTCTGG AATTCTAAGACAACC TERM 411 333918 - 333882 - g 77 -5.2 -4.93318 | gap 1, overlap 333883 333884 333887 333909 333912 TACAATCCAGAAAAA GCCAAGGCTGAATTTGC TAAA GCTAAATCAGCCTT-AC AAGCAGAAGGTGTGA TERM 412 333914 - 333887 - g 72 -8.4 -3.49077 | overlap 333884 333882 333883 333909 333912 TCCAGAAAAAGCCAA GGCTGAATTTGC TAAA GCTAAATCAGCC TTACAAGCAGAAGGT aliA 332640 - 334622 + | oligopeptide ABC transporter, oligopeptide-binding protein AliA TERM 413 334634 - 334682 + F 73 -7.8 -3.85817 | opp_overlap 334634 334636, overlap 334643 334671 ATAACTGTTGCAAAA TATAAGAAAGGATTTAGTATTT CTCTT GAATGCTGAATCCTTTTTTACA TTTGTAAAGAAAGAT TERM 414 334643 - 334673 + F 85 -6.3 -5.24449 | opp_overlap 334636 334634, overlap 334634 334671 GCAAAATATAAGAAA GGATTTAGTATTT CTCTT GAATGCTGAATCC TTTTTTACATTTGTA TERM 415 335783 - 335764 - g 91 -9.4 -4.63527 | TGACCATCTTAAAAA TGAGAAGA AGAT TCTTCTCA AGGCGGGCTCTTATG TERM 416 335867 - 335853 - g 82 -7.8 -4.59511 | AAGAGGGGGTAAAAA CAGAGG ATA CCCCTG CTGAAAAAGAAACAG TERM 417 337065 - 337053 - g 75 -2.7 -5.27477 | ACTTCAATGAAAAAA TTCTC CGT AAGAA TCCAGATGGAAGCTA SPD_0335 334922 - 340225 + | cell wall surface anchor family protein TERM 418 340324 - 340301 - T 100 -15.4 -5.02502 | opp_overlap 340301 TATAGTACAGAAAAA GCCTGAGAAG ATGT CTTCTCAGGC TTTTGTTAAGCACAT TERM 419 340301 - 340324 + T 100 -15.4 -4.63486 | opp_overlap 340301 TATAGTACAGAAAAA GCCTGAGAAG ATGT CTTCTCAGGC TTTTGTTAAGCACAT TERM 420 340385 - 340364 - T 100 -9.5 -5.14965 | AGTGCTATGAAAAAA TCACCCAGA AAAA TCTGGATGA TAAATGTTATGGTTG pbp1A 342551 - 340392 - | penicillin-binding protein 1A TERM 421 342358 - 342372 + g 73 -2.1 -5.22006 | overlap 342354 CGTTCAGAACCCAAG TCAGC AATGA GTTGA TTTTTATTGTCGTAG recU 343144 - 342548 - | Holliday junction-specific endonuclease TERM 422 343424 - 343403 - g 71 -9.5 -2.78463 | AGGTTGCTCAGGAGA TGAAAACCG AATA CGGTTTCCA GTTGGCCACCATTTT SPD_0338 343210 - 343737 + | hypothetical protein SPD_0339 343807 - 344136 + | hypothetical protein TERM 423 344552 - 344578 + F 100 -10.2 -5.0538 | AAATTGCATATAGGT TGGGGCTGAGAA ATT TTCTCAACCTCA TTTTTTAAAGTGGAC SPD_0341 344622 - 345779 + | hypothetical protein TERM 424 345816 - 345805 - g 93 -5.8 -5.55664 | TCATGAGTAAAAAAA GACG AAAT CGTC ATAAAAAAGAAGCTC SPD_0342 345792 - 347186 + | hypothetical protein gnd 347262 - 348686 + | 6-phosphogluconate dehydrogenase SPD_0344 348698 - 349387 + | DNA-binding response regulator TERM 425 349392 - 349413 + F 100 -9.5 -5.03747 | opp_overlap 349387 349392 TGCAAGAATAGAAAA GCAGTTGCA GTTG TGTAACTGC TTTTTTGAGGAGTTT TERM 426 349413 - 349392 - f 83 -7.3 -4.79752 | opp_overlap 349392, overlap 349387 TGCAAGAATAGAAAA GCAGTTGCA GTTG TGTAACTGC TTTTTTGAGGAGTTT TERM 427 349505 - 349526 + G 76 -2.3 -5.41941 | gap 1, opp_overlap 349505 349507, overlap 349507 ACTTTTGAAAAAAAT GA-TGCAAGT TCT ACTAGCAGTC TTTTTCTTTGGTTTG cbpC 349485 - 350501 + | choline binding protein C TERM 428 350516 - 350533 + F 86 -5.5 -5.61596 | opp_overlap 350510 ATGAAAGAAGCGATT GCGAATG GAAA CAATCGC TTTTTTTGTGAAAAT TERM 429 351190 - 351177 - g 77 -8.1 -4.17316 | opp_overlap 351178, overlap 351178 AGTGGTTCAAAATAA GGGCA AGGA TGCCC TACCGTTTTTGCATG mvk 350623 - 351501 + | mevalonate kinase TERM 430 351571 - 351583 + G 70 -7.7 -3.64364 | overlap 351575 AAAAAGAGATGGTGC CTGCT ACT AGCAG TATTTCTCTAACTTT mvaD 351483 - 352436 + | diphosphomevalonate decarboxylase mvaK2 352423 - 353430 + | phosphomevalonate kinase TERM 431 353561 - 353577 + G 71 -3.7 -4.99035 | opp_overlap 353539, overlap 353562 ACAGAGTTTGCTGGT CGAAAGT GGG ACTTTCC TTTTTATATCAATGC fni 353414 - 354424 + | isopentenyl pyrophosphate isomerase TERM 432 354418 - 354432 + F 83 -4.9 -5.48825 | opp_overlap 354418 TGATCAGATGAAAAA GGCGT AACCA GCGCC TTTTTTTCCATCCTC TERM 433 354432 - 354418 - f 70 -4.2 -4.82667 | opp_overlap 354418 TGATCAGATGAAAAA GGCG TAACCAG CGCC TTTTTTTCCATCCTC SPD_0350 354502 - 355200 + | hypothetical protein SPD_0351 355197 - 356192 + | sensor histidine kinase, putative SPD_0352 356206 - 356838 + | DNA-binding response regulator SPD_0353 356839 - 356985 + | hypothetical protein SPD_0355 357758 - 357952 + | hypothetical protein TERM 434 358405 - 358391 - f 79 -8.6 -3.77588 | ATTTGACAGGAATAA CTGTGA CTA TCACAG GCTATCCATCATATA cbpF 358922 - 359806 + | choline binding protein F TERM 435 359943 - 359975 + T 100 -12.2 -4.69549 | opp_overlap 359943 AATAATTTATCCAAA GGATTTAGTTCTGT ACTGC ACAGGACTAAGTCC TTTTAGTTTTACCTT TERM 436 359975 - 359943 - T 77 -8.5 -3.69734 | opp_overlap 359943 AATAATTTATCCAAA GGATTTAGTTCTGTA CTG CACAGGACTAAGTCC TTTTAGTTTTACCTT SPD_0359 361080 - 360868 - | hypothetical protein TERM 437 361086 - 361132 + H 89 -11.8 -3.26471 | opp_overlap 361089, overlap 361089 361091 361126 TTAATTTCATAATAA AAACACCCCAAAAGTTAGAT TTTTTCT GTCTAACTTTTGGGGTGTAG TTCATGTACACCTGA TERM 438 361089 - 361129 + H 100 -17.9 -2.81547 | opp_overlap 361089, overlap 361086 361091 361126 ATTTCATAATAAAAA CACCCCAAAAGTTAGAT TTTTTCT GTCTAACTTTTGGGGTG TAGTTCATGTACACC TERM 439 361129 - 361089 - H 100 -17.2 -5.19328 | opp_overlap 361089 361086 361091 361126 ATTTCATAATAAAAA CACCCCAAAAGTTAGA TTTTTTCTG TCTAACTTTTGGGGTG TAGTTCATGTACACC TERM 440 361091 - 361127 + H 95 -14.7 -2.95521 | opp_overlap 361089, overlap 361089 361086 361126 TTCATAATAAAAACA CCCCAAAAGTTAGAT TTTTTCT GTCTAACTTTTGGGG TGTAGTTCATGTACA TERM 441 361232 - 361198 - H 70 -8 -3.15324 | opp_overlap 361197 361188 361202 361228, overlap 361197 361201 361202 361228 CAGCCTCATCAAAAG TAATGTTTTGACACAA AAT CTGTGACAAAACTTTA GTTTTAAAGGTTTTT TERM 442 361202 - 361228 + H 81 -8.1 -4.20136 | opp_overlap 361201 361198 361197 361202, overlap 361197 361188 CTCATCAAAAGTAAT GTTTTGACACA AAATC TGTGACAAAAC TTTAGTTTTAAAGGT mtlA 361289 - 363058 + | PTS system, mannitol-specific IIBC components TERM 443 363145 - 363112 - g 72 -9.7 -3.05496 | opp_overlap 363118, overlap 363109 363117 CGAGAAGAACAATTA TTGAAGGCTTTCCTA CATG TAGGGAAGCTTTCAA TGCAAGATATGACTG TERM 444 363118 - 363139 + G 79 -9.5 -3.6502 | opp_overlap 363117 363112 363109 GAACAATTATTGAAG GCTTTCCTA CATG TAGGGAAGC TTTCAATGCAAGATA SPD_0361 363082 - 365037 + | transcriptional regulator, putative mtlA2 365039 - 365476 + | PTS system, mannitol-specific enzyme IIA SPD_0363 365538 - 366674 + | mannitol-1-phosphate 5-dehydrogenase TERM 445 366733 - 366745 + F 71 -7.7 -3.58905 | CTTAGGCATATGTTA CTGAC TTC GTCAG TTCTATCTACAACCT TERM 446 366778 - 366758 - f 72 -8.3 -3.35996 | opp_overlap 366775, overlap 366759 CAGTTCTATCTACAA CCTCAAAGC AGT GCTTTGAGC TGACTCCGTCAGTCT TERM 447 366777 - 366759 - f 84 -11.8 -2.61383 | opp_overlap 366775, overlap 366758 AGTTCTATCTACAAC CTCAAAGC AGT GCTTTGAG CTGACTCCGTCAGTC TERM 448 366986 - 366996 + F 74 -5.4 -4.75404 | TTATTGGATTTTCTC CTCA GAT TGAG TTTTTGATCAGCTTT SPD_0364 367056 - 367169 + | ABC-type polar amino acid transport system, ATPase component tig 367473 - 368756 + | trigger factor TERM 449 368798 - 368767 - T 100 -17.5 -4.22591 | opp_overlap 368774, overlap 368774 AATAATCTTAATAAA CAGAAAACCCACC TGAATT GGTGGGTTTTCTG ATGCACTATTTTCCA TERM 450 368791 - 368774 - T 90 -8.4 -4.89838 | opp_overlap 368774, overlap 368767 TTAATAAACAGAAAA CCCACC TGAATT GGTGGG TTTTCTGATGCACTA TERM 451 368774 - 368791 + T 84 -8.4 -4.46926 | opp_overlap 368774 368767 TTAATAAACAGAAAA CCCACC TGAATT GGTGGG TTTTCTGATGCACTA SPD_0366 371170 - 368804 - | helicase, RecD/TraA family protein TERM 452 368854 - 368870 + g 88 -8.7 -4.72029 | TAATCCCAATCATGG CTGGGAT GCG GTCCCAG TTTTCTTCGGTTAGG TERM 453 371394 - 371367 - R 79 -8.4 -3.9093 | opp_overlap 371367 CTCACGATAGAAGAA GAGGCTGAGATT GGTG ATTCTCGGCCTC TTAGGTTTCTTAAAA TERM 454 371367 - 371394 + r 85 -10.6 -3.37761 | opp_overlap 371367 CTCACGATAGAAGAA GAGGCTGAGATT GGTG ATTCTCGGCCTC TTAGGTTTCTTAAAA lepB 372018 - 371404 - | signal peptidase I TERM 455 371637 - 371670 + g 88 -11.1 -4.02022 | AAGTTCCTTTATTTC CTTCAAAGCCCTTGC CTGA GTAAGTGCTTTGGAG TTTGTCATCCTTGAA rnhC 372902 - 372030 - | ribonuclease HIII SPD_0369 372980 - 373291 + | hypothetical protein SPD_0370 373288 - 373836 + | hypothetical protein TERM 456 373840 - 373860 + F 81 -7.6 -4.4448 | gap 1, opp_overlap 373840 TTAATCGGATAAAAA GGGC-AGGA GTTT TCCTAGCCC TTTGTTTACAGATTT TERM 457 373860 - 373840 - f 88 -7.6 -4.87786 | gap 1, opp_overlap 373840 TTAATCGGATAAAAA GGGC-AGGA GTTT TCCTAGCCC TTTGTTTACAGATTT TERM 458 374166 - 374151 - g 73 -7.6 -4.00348 | TCTCAACTAAGGAAA TTGCAG GAGT CTGCAA GAGGTTGGAGATGGG SPD_0371 373940 - 376276 + | MutS2 family protein TERM 459 376560 - 376584 + F 100 -10.1 -4.68655 | opp_overlap 376565 TATCTAAGCATTCCA GAGTACATGTA TCT TGCATGTGCTC TTTCTTTTGGGGTTG TERM 460 376989 - 376960 - g 95 -12.9 -3.72576 | CTCTTGGCCATCAAA TACCGCACCAAGG ACGA CCATGGTGCAGTA GCGGGAGGTCCCATG TERM 461 377044 - 377034 - g 76 -6.8 -4.40358 | opp_overlap 377034 377037 AGGGATGGGAGAAAA GTGG CGA CCAC TTGCTGTTTTGTTTG TERM 462 377769 - 377779 + G 70 -3.2 -4.93296 | TCGCTTTATCTGGCT CTAC CGT GTGG TTTTTGTGCTCATGG SPD_0372 376618 - 377940 + | sodium:alanine symporter family protein TERM 463 377946 - 377962 + F 87 -6.6 -5.50499 | opp_overlap 377946 TGACAAATAATGGAA TCACAC AGCTC GTGTGA TTTTTTTGCCTATAA TERM 464 378380 - 378366 - g 79 -10 -3.55622 | opp_overlap 378372 GTGAAGTGGTGCAAA TCACGG CAG CCGTGA CCAATGGTTGTGCCT SPD_0373 378158 - 378706 + | hypothetical protein TERM 465 378724 - 378748 + F 82 -4.3 -5.48825 | opp_overlap 378725, overlap 378725 CATATCTGAGTAAAA TGAAGTCTG AAATAAG CGGACTTCG TTTTTTTAAATCCTC SPD_0374 378816 - 379715 + | exfoliative toxin, putative TERM 466 379706 - 379735 + T 87 -6.5 -5.42265 | opp_overlap 379709, overlap 379709 GATTTGGTTACGAAA AAAGGTCTAGCTA GAAA TAGCTAAACCTTA TTTTTTATGGTTTGA TERM 467 379732 - 379709 - T 100 -10.4 -5.14563 | opp_overlap 379706 379709 TTGGTTACGAAAAAA GGTCTAGCTA GAAA TAGCTAAACC TTATTTTTTATGGTT TERM 468 379709 - 379732 + T 86 -8.2 -4.75967 | opp_overlap 379709, overlap 379706 TTGGTTACGAAAAAA GGTCTAGCTA GAAA TAGCTAAACC TTATTTTTTATGGTT serS 381014 - 379740 - | seryl-tRNA synthetase SPD_0376 381598 - 381227 - | hypothetical protein SPD_0377 382965 - 381601 - | aspartate kinase TERM 469 382021 - 382005 - G 70 -8.7 -3.27525 | opp_overlap 382005 382003 TGCGGCCAAATCCAA CCTCACG GTT CATGAGG TATTTCGACATGTTA TERM 470 383068 - 383090 + H 100 -9.2 -5.59655 | AGCGAGCCTTTCTTA TCGGCTGAGA CAC TTTCAGTCGA TTTTTTCTTGCTTTC SPD_0378 383290 - 384075 + | enoyl-CoA hydratase SPD_0379 384169 - 384603 + | transcriptional regulator, MarR family protein fabH 384603 - 385577 + | 3-oxoacyl-(acyl carrier protein) synthase III acpP 385637 - 385861 + | acyl carrier protein TERM 471 385900 - 385879 - f 72 -8 -3.47709 | opp_overlap 385879 385876 AGAATATTAGTAGAA GGAGTAGG GAGAAA CCCACTCC CTCTTGTTTAGGTAA fabK 385980 - 386954 + | trans-2-enoyl-ACP reductase II fabD 386947 - 387867 + | acyl-carrier-protein S-malonyltransferase fabG 387901 - 388632 + | 3-ketoacyl-(acyl-carrier-protein) reductase fabF 388654 - 389889 + | 3-oxoacyl-(acyl carrier protein) synthase II accB 389892 - 390377 + | acetyl-CoA carboxylase biotin carboxyl carrier protein subunit TERM 472 390515 - 390481 - g 83 -7.2 -4.72272 | opp_overlap 390482, overlap 390482 TGTTGCTATCAAAAA TGTGACCATTAACGAA CCT TTCTTTAACGGCCACT TTCCTCAATACCCAG TERM 473 390514 - 390482 - g 80 -10.7 -3.43042 | opp_overlap 390482, overlap 390481 GTTGCTATCAAAAAT GTGACCATTAACGAA CCT TTCTTTAACGGCCAC TTTCCTCAATACCCA fabZ 390374 - 390796 + | (3R)-hydroxymyristoyl-ACP dehydratase accC 390808 - 392175 + | acetyl-CoA carboxylase biotin carboxylase subunit TERM 474 392296 - 392278 - g 79 -6.6 -4.65895 | TCGGTTAGGGAAAAA CCTCAAGC TAA GCCAGAGG TTCCAGATGAATTAT TERM 475 392488 - 392474 - g 80 -10 -3.67792 | opp_overlap 392473 392474 TTACAGGGATTGAAA GCAAGG ATC CCTTGC ATTTCCCTGGTTACC TERM 476 392474 - 392488 + G 73 -10 -2.82595 | opp_overlap 392474, overlap 392473 TTACAGGGATTGAAA GCAAGG ATC CCTTGC ATTTCCCTGGTTACC accD 392212 - 393078 + | acetyl-CoA carboxylase subunit beta TERM 477 393770 - 393759 - g 73 -5.8 -4.62085 | AGTGTCAAAAAAGAA CTCC AAAC GGAG CTGGCTAGACTTTCA accA 393075 - 393842 + | acetyl-CoA carboxylase subunit alpha TERM 478 393854 - 393872 + F 82 -5.3 -5.24129 | opp_overlap 393854 CTAAGAATGACTAAA TGAGACT AGAAA GGTCTCA TTTTTTATGGAAAAA SPD_0391 394001 - 394186 + | hypothetical protein TERM 479 394624 - 394646 + G 70 -7.8 -3.68351 | opp_overlap 394615, overlap 394627 AGGAGACTCTTGATA GAGGGTATTT TAT GAATACCTTC TTTCCCTAGTCCAAG SPD_0392 394443 - 394655 + | hypothetical protein TERM 480 394731 - 394762 + T 71 -3.1 -5.05153 | CTATCTCACAGAGAT CCAATTAGTTTAT TATATT ATAGTCTGATTGG TTTCTTTTTTGCCCT TERM 481 394910 - 394955 + T 100 -11.5 -4.10144 | opp_overlap 394922, overlap 394922 TTTTAGATAGTGGGA GGCAAAGAAAAAGTGTTTGAT AGAT ATCAAACACTTTTTCTTTTTA TTGTTCTTCTGTTAC TERM 482 394922 - 394943 + T 100 -10.3 -5.74684 | opp_overlap 394922, overlap 394910 GGAGGCAAAGAAAAA GTGTTTGAT AGAT ATCAAACAC TTTTTCTTTTTATTG TERM 483 394943 - 394922 - T 100 -10.3 -5.30616 | opp_overlap 394922 394910 GGAGGCAAAGAAAAA GTGTTTGAT AGAT ATCAAACAC TTTTTCTTTTTATTG nusB 395375 - 394953 - | transcription antitermination protein NusB SPD_0394 395757 - 395368 - | hypothetical protein efp 396339 - 395779 - | elongation factor P TERM 484 396464 - 396434 - R 75 -8.5 -3.48924 | gap 1, opp_overlap 396434 396436 396441, overlap 396441 GGAGTTGGTAGAGAA GAA-AAAACCAACC TTAG GGCTGGTTTTGTTC TGTCTAGTTTTCTTT TERM 485 396456 - 396441 - R 89 -6.8 -5.60689 | opp_overlap 396436 396434 396441, overlap 396434 GTAGAGAAGAAAAAA CCAACC TTAG GGCTGG TTTTGTTCTGTCTAG TERM 486 396441 - 396456 + r 73 -4.6 -4.87592 | opp_overlap 396441 396434, overlap 396436 396434 GTAGAGAAGAAAAAA CCAACC TTAG GGCTGG TTTTGTTCTGTCTAG gatB 397910 - 396468 - | aspartyl/glutamyl-tRNA amidotransferase subunit B gatA 399376 - 397910 - | aspartyl/glutamyl-tRNA amidotransferase subunit A gatC 399678 - 399376 - | aspartyl/glutamyl-tRNA amidotransferase subunit C prfC 399891 - 401435 + | peptide chain release factor 3 TERM 487 401467 - 401450 - f 79 -8.5 -3.75292 | opp_overlap 401450 401449 401432 ACTCAGTACCAACAA TTGGAAC TAAA GTTCCAA ATTGTTGGACGCTAG SPD_0400 401704 - 402189 + | glycosyl transferase family protein 8, putative rpmB 402305 - 402493 + | 50S ribosomal protein L28 TERM 488 402510 - 402521 + F 93 -5.8 -5.92399 | opp_overlap 402503 402497 402510, overlap 402497 AATAAAAGCAAAGGA GACC TTAG GGTC TTTTTTCTTTTATTG SPD_0402 402650 - 403015 + | hypothetical protein TERM 489 403767 - 403796 + G 76 -7.3 -4.1899 | gap 1 TGAAATCATGGTAGC TCTTAAGCA-AGGT CCA ACCTATGCTAAAGA TTTTGACTACGATGA SPD_0403 403018 - 404685 + | hypothetical protein TERM 490 404696 - 404713 + F 100 -6.3 -6.04324 | opp_overlap 404696 404699 AATAAGATTAATGAA GGACTGA GAAA TCAGTTC TTTTTTCTTTTTTAG TERM 491 404786 - 404765 - f 82 -3.1 -5.74684 | TAATAAAAACAAAAA TAACATTCA TAAA TAAACGTTA AAATAGAAAATTCAG ilvB 404886 - 406586 + | acetolactate synthase catalytic subunit ilvH 406579 - 407055 + | acetolactate synthase 3 regulatory subunit ilvC 407121 - 408143 + | ketol-acid reductoisomerase SPD_0407 408220 - 408486 + | hypothetical protein SPD_0408 408724 - 409080 + | hypothetical protein TERM 492 409112 - 409081 - f 87 -10.4 -3.7732 | opp_overlap 409089, overlap 409082 409089 TTCGGAGATGAATAA CTAAAAAACAGTCA TTAG TGACTGTTTTTTAT AGAAAAAGAGGTTTT TERM 493 409111 - 409082 - f 89 -13.9 -2.86071 | opp_overlap 409089, overlap 409081 409089 TCGGAGATGAATAAC TAAAAAACAGTCA TTAG TGACTGTTTTTTA TAGAAAAAGAGGTTT TERM 494 409104 - 409089 - f 89 -7.6 -5.37865 | opp_overlap 409089, overlap 409082 409081 TGAATAACTAAAAAA CAGTCA TTAG TGACTG TTTTTTATAGAAAAA TERM 495 409089 - 409104 + F 89 -7.6 -5.24129 | opp_overlap 409082 409081 409089 TGAATAACTAAAAAA CAGTCA TTAG TGACTG TTTTTTATAGAAAAA ilvA 409130 - 410380 + | threonine dehydratase TERM 496 411276 - 411261 - g 78 -2.6 -5.46698 | overlap 411263 TGCAAAAGTAAAAAA TATTTC ATTT GAAACA GCCTTAGGCCTAATT SPD_0410 411115 - 411330 + | hypothetical protein TERM 497 411430 - 411410 - T 74 -5.4 -4.82667 | opp_overlap 411412 411418 TGAGGACAGCAAAAA GACTGCAC GGTTG ATGCAGCC TTTTCTTTTTATTTG TERM 498 411418 - 411430 + T 84 -5.5 -5.48028 | opp_overlap 411410, overlap 411412 GCAAAAAGACTGCAC GGTTG ATG CAGCC TTTTCTTTTTATTTG SPD_0411 412179 - 411439 - | amino acid ABC transporter, ATP-binding protein SPD_0412 413744 - 412179 - | amino acid ABC transporter, amino acid-binding protein/permease protein TERM 499 414625 - 414596 - g 83 -5.1 -5.27938 | opp_overlap 414596 414621 ATCGTTAAAGAAAAA GATCAAAGTAAAC AACT ACTTACTTGGATC TTCCCTTCGATCCTT TERM 500 415164 - 415179 + G 72 -9 -3.31558 | GAAAACGAGTTTCCT TCTGGG GGCT CCCAGA TTACTATCGTCCTTT TERM 501 415316 - 415326 + G 70 -5.4 -4.43189 | CTTTACCTCCCTTTG CCAA TAC TTGG TTTTCTAGGGTTAGT SPD_0414 413882 - 415771 + | hypothetical protein SPD_0413 415929 - 415768 - | hypothetical protein TERM 502 416366 - 416328 - H 73 -8.8 -3.18681 | opp_overlap 416332, overlap 416329 416363 CCCCAATCCCAGTAA CCGTCGTGATGGCCGAGT TGA ACTCAGCCATCAAGTCAT TGACACATGTTTCCG TERM 503 416365 - 416329 - H 86 -12.3 -2.50994 | opp_overlap 416332, overlap 416328 416363 CCCAATCCCAGTAAC CGTCGTGATGGCCGAGT TGA ACTCAGCCATCAAGTCA TTGACACATGTTTCC TERM 504 416332 - 416362 + H 86 -12.6 -2.72227 | opp_overlap 416329 416328 AATCCCAGTAACCGT CGTGATGGCCGAGT TGA ACTCAGCCATCAAG TCATTGACACATGTT bacA 417195 - 418040 + | undecaprenyl pyrophosphate phosphatase TERM 505 418042 - 418075 + G 81 -11.9 -2.74192 | opp_overlap 418047, overlap 418047 GTTTATTTGTATAAG AAAAACCTTGAAGGG GCAA CTCTTCAAGGTTTTA TACTCTTAGAAAATC TERM 506 418070 - 418047 - g 100 -9.6 -5.18726 | opp_overlap 418042 418047 TTTGTATAAGAAAAA CCTTGAAGGG GCAA CTCTTCAAGG TTTTATACTCTTAGA TERM 507 418047 - 418070 + G 95 -11.8 -4.55023 | opp_overlap 418047, overlap 418042 TTTGTATAAGAAAAA CCTTGAAGGG GCAA CTCTTCAAGG TTTTATACTCTTAGA SPD_0418 418033 - 418161 + | hypothetical protein dinP 419248 - 418187 - | DNA polymerase IV TERM 508 418396 - 418426 + g 83 -4.9 -5.27399 | GTTGATGTAGATTGA GAGC-GACTTTTTCT GAT AGAAGA-GTCAGCTC TTTTTTGATATCTTC TERM 509 419187 - 419208 + g 74 -3.7 -5.06816 | opp_overlap 419187 419188 419190, overlap 419188 419206 ACCGCAGCAAAAAAG GCATCCATG TCAA TATGGATGA TTTTTCTTGACAAAT TERM 510 419327 - 419345 + H 81 -9.6 -3.35597 | overlap 419310 419330 TCAAAACAGTATTTT GAGCTGAC TTC GTCAGTTC TATTTACAACCTCAA TERM 511 419330 - 419342 + H 73 -7.7 -3.81755 | overlap 419327 AAACAGTATTTTGAG CTGAC TTC GTCAG TTCTATTTACAACCT TERM 512 419375 - 419355 - H 72 -8.3 -3.35996 | opp_overlap 419374, overlap 419356 419362 CAGTTCTATTTACAA CCTCAAAGC AGT GCTTTGAGC AGCCTGCGGCTAGCT TERM 513 419374 - 419356 - H 84 -11.8 -2.61383 | overlap 419355 419362 AGTTCTATTTACAAC CTCAAAGC AGT GCTTTGAG CAGCCTGCGGCTAGC TERM 514 421509 - 421495 - g 74 -6.4 -4.44046 | CTTACTCTAAACAAA CTGGTA ACT CACCAG TTCACAAAGGTGTAT pflB 419643 - 421967 + | formate acetyltransferase TERM 515 421994 - 422015 + T 100 -12.3 -4.54821 | opp_overlap 421990 421994 AATAATGAAAAGGAA CCCTCGGTC AATC GACTGAGGG TTTTGTGCTTGGGAT TERM 516 422015 - 421994 - T 83 -10.1 -3.78229 | opp_overlap 421994, overlap 421990 AATAATGAAAAGGAA CCCTCGGTC AATC GACTGAGGG TTTTGTGCTTGGGAT SPD_0421 422681 - 422334 - | hypothetical protein SPD_0422 423163 - 422879 - | hypothetical protein TERM 517 422958 - 422997 + g 70 -3.1 -5.00616 | overlap 422961 422961 GAAATCACATATTTA TGAG-TTGGAGTATGCTCT TGAA AG-GCATACTTCAAGCTAA TTTTTTGAAAACGGG TERM 518 424494 - 424518 + r 74 -6.4 -4.33487 | overlap 424491 TCAACATAGCGAGAA GGCGGTTTCC TATAT GGAAGTCGTC TTGTTTTCATATTGT SPD_0423 425821 - 424598 - | ROK family protein TERM 519 425916 - 425901 - H 91 -2.6 -6.04953 | overlap 425903 ATACAAAGAAAAAAA TATTGT AAAA ACAACA AAAAATATATTGACA TERM 520 426055 - 426043 - g 82 -7.7 -4.56597 | CCGTTTGGTGAAAAA GTTGG CAA CCAAC GGCATTTGAAAGCTA SPD_0424 425989 - 427311 + | PTS system, cellobiose-specific IIC component SPD_0425 427313 - 429199 + | hypothetical protein lacF-1 429367 - 429711 + | PTS system, lactose-specific IIA component lacG-1 429721 - 431133 + | 6-phospho-beta-galactosidase lacE-1 431202 - 432881 + | PTS system, lactose-specific IIBC components TERM 521 432999 - 432970 - T 100 -16.7 -3.9644 | opp_overlap 432970 TTTTTAATATAAGAA TCCCTCTTTTTAC AATT GTAAAAAGAGGGA TTTTGTATTTTATCT TERM 522 432970 - 432999 + T 100 -16.7 -4.95843 | opp_overlap 432970 TTTTTAATATAAGAA TCCCTCTTTTTAC AATT GTAAAAAGAGGGA TTTTGTATTTTATCT SPD_0429 434448 - 433009 - | potassium uptake protein, Trk family protein trkA 435801 - 434452 - | potassium transporter peripheral membrane component TERM 523 435126 - 435138 + g 70 -7.7 -3.64609 | CGATGAGAAGGCTCT TCACG GCG CGTGA TTTAAAATAATTATG TERM 524 436706 - 436716 + G 71 -6.8 -3.96483 | opp_overlap 436706 436705 TGCAGATGTGAGAAT TGGG CAA CCCA TTCTTTACATCAACT SPD_0431 435990 - 436838 + | hypothetical protein TERM 525 437009 - 437019 + G 71 -6.8 -4.09292 | TCTATTATTTTTGGA CCGA TTA TCGG TTTGCTTGTTGGGTT SPD_0432 436853 - 437401 + | hypothetical protein TERM 526 437449 - 437467 + G 72 -10.4 -2.61383 | overlap 437448 GTTAGCCGCAGGTTG CTCAAAAC AGT GTTTTGAG GTTGTAGATGAAACT TERM 527 437493 - 437481 - g 73 -7.7 -3.83205 | AGGTTGTAGATGAAA CTGAC GAA GTCAG TAACCATACCTACGG SPD_0433 437408 - 437620 + | hypothetical protein SPD_0434 437722 - 439404 + | ABC transporter, ATP-binding protein TERM 528 439613 - 439623 + G 70 -5.4 -4.34345 | overlap 439603 TGCGACGGTATTTGC CGTT TTA AACG TTTTGATGGTCTATC SPD_0435 439389 - 440219 + | hypothetical protein SPD_0436 440412 - 440915 + | TrmH family RNA methyltransferase TERM 529 440958 - 440941 - f 77 -5.5 -4.89562 | opp_overlap 440941 440942, overlap 440936 440942 TGAAAATGAACAAAA TGCTTGC GCTT GCAAGCG TTTTTTGTTATGATA TERM 530 440941 - 440958 + F 93 -7.7 -5.58179 | opp_overlap 440936 440941 440942, overlap 440942 TGAAAATGAACAAAA TGCTTGC GCTT GCAAGCG TTTTTTGTTATGATA TERM 531 440957 - 440942 - f 75 -9 -3.5211 | opp_overlap 440942 440941, overlap 440941 440936 GAAAATGAACAAAAT GCTTGC GCTT GCAAGC GTTTTTTGTTATGAT TERM 532 440942 - 440957 + F 82 -9 -3.9328 | opp_overlap 440941 440936 440942, overlap 440941 GAAAATGAACAAAAT GCTTGC GCTT GCAAGC GTTTTTTGTTATGAT SPD_0437 441374 - 441937 + | hypothetical protein TERM 533 441956 - 441969 + G 84 -8.1 -4.72729 | opp_overlap 441956 AACATTTTTAATGAA GGGCA GTTT TGCCC TTTTACTTTTCGTTA TERM 534 442137 - 442150 + G 70 -3.1 -4.94487 | overlap 442107 GTGATTATCACTTGG GTTGT CATT ACAGC TTTTGTCTTTTATCG TERM 535 442389 - 442379 - g 79 -5.4 -4.93547 | TCAACGAATTAAAAA TCCA GTC TGGA GAAAAATCGTACAAA SPD_0438 441927 - 442577 + | PAP2 family protein SPD_0439 442605 - 442994 + | hypothetical protein SPD_0440 442999 - 443448 + | hypothetical protein SPD_0441 443576 - 444163 + | DNA-directed RNA polymerase subunit delta TERM 536 444231 - 444255 + F 93 -7.1 -5.75538 | overlap 444228 444233 CTCTTTTAGAGGTCG GGGCTCCCTAG TTC TTAGGGAGCTA TTTTTGTTTTTTCAA TERM 537 444233 - 444253 + F 100 -11.9 -4.48934 | overlap 444228 444231 CTTTTAGAGGTCGGG GCTCCCTAG TTC TTAGGGAGC TATTTTTGTTTTTTC TERM 538 444266 - 444287 + F 74 -5.9 -4.4767 | overlap 444268 AGCTATTTTTGTTTT TTCAAGAAG TTAT CTTCTTGTA TTTTATACTCAATGA TERM 539 444268 - 444285 + F 79 -8.5 -3.84585 | overlap 444266 CTATTTTTGTTTTTT CAAGAAG TTAT CTTCTTG TATTTTATACTCAAT TERM 540 444340 - 444358 + F 78 -10.4 -2.61383 | overlap 444339 ACTAGCCGTAGGCTG CTCAAAAC ACT GTTTTGAG GTTGTAGATAAGACT TERM 541 444948 - 444932 - g 81 -2.9 -5.63517 | CTTTGAAAGAAAAAA TCAAGCG TGC CGCTCTA ACGACCGACTCTGAT pyrG 444553 - 446160 + | CTP synthetase TERM 542 446172 - 446193 + T 100 -9.5 -5.09225 | opp_overlap 446172 TTAGCAAAATCAGAA CCTTTGAGA AAAA TCTCAGAGG TTTTTTGCATACGAT TERM 543 446715 - 446679 - T 70 -4.5 -4.72272 | opp_overlap 446679 446680 446683 446686, overlap 446683 446686 CTTGCTTAGGAAAAA GTAAGAAGCCATCCA ATTATGA TGGATAGCTTCTTGG TTATTAGATTTGTTC TERM 544 446683 - 446711 + T 71 -7.5 -3.56576 | opp_overlap 446679 446683 446686, overlap 446680 446679 446686 CTTAGGAAAAAGTAA GAAGCCATCCA ATTATGA TGGATAGCTTC TTGGTTATTAGATTT TERM 545 446711 - 446683 - T 83 -9.7 -3.84901 | opp_overlap 446683 446680 446679 446686, overlap 446679 446686 CTTAGGAAAAAGTAA GAAGCCATCCA ATTATGA TGGATAGCTTC TTGGTTATTAGATTT SPD_0443 448350 - 446719 - | Na/Pi-cotransporter II-related protein TERM 546 452382 - 452360 - g 76 -3.5 -5.28942 | TACCTCAAACAAAAA TTAGCAG AAGTTGAAG CTGCTAA GAACAAGGTGGTCTA SPD_0444 448715 - 453622 + | endo-beta-N-acetylglucosaminidase, putative pgk 453712 - 454908 + | phosphoglycerate kinase TERM 547 454929 - 454956 + F 81 -7.8 -4.42238 | opp_overlap 454929, overlap 454934 TATAAACAAATCAAA GAAGAGAGGGAT GAGA GTTCCTCTTTTC TTTTGCTTAAAATAA TERM 548 454934 - 454951 + F 76 -4.1 -5.18643 | opp_overlap 454929, overlap 454929 ACAAATCAAAGAAGA GAGGGAT GAGA GTTCCTC TTTTCTTTTGCTTAA SPD_0446 455044 - 455571 + | hypothetical protein TERM 549 455591 - 455569 - f 100 -7.2 -5.8096 | opp_overlap 455569 455572 GAGAAAAAAGAAAAA TAATGTTACA TTT TATAACATTA TCAATTGACGTTTGT SPD_0447 455648 - 456004 + | transcriptional regulator, MerR family protein glnA 456041 - 457387 + | glutamine synthetase, type I TERM 550 457468 - 457485 + F 83 -6.3 -4.85782 | opp_overlap 457468 CTATAACCCTTAAAA TAGCGAT TTCG GTCGCTA TTTATTTTTCGAAAA SPD_0449 457860 - 457997 + | hypothetical protein TERM 551 458048 - 458063 + F 95 -9 -5.04175 | AACCCATTATCTATA GGCGTA TTTT TACGCC TTTTTATATACTTGA SPD_0451 458167 - 459447 + | type I restriction-modification system, S subunit, putative SPD_0450 460000 - 459401 - | type I restriction-modification system, S subunit, putative TERM 552 460006 - 459978 - G 93 -11.1 -5.01535 | opp_overlap 459978, overlap 459981 CCATAATCACAAAAA TAGCAGGTAGTCA GTT TGACCACCTGTTA TTTTTTACCAATTAA TERM 553 459978 - 460006 + g 93 -11.1 -5.055 | opp_overlap 459978 459981 CCATAATCACAAAAA TAGCAGGTAGTCA GTT TGACCACCTGTTA TTTTTTACCAATTAA TERM 554 460003 - 459981 - G 84 -12.8 -3.05709 | opp_overlap 459978, overlap 459978 TAATCACAAAAATAG CAGGTAGTCA GTT TGACCACCTG TTATTTTTTACCAAT SPD_0452 460808 - 460011 - | integrase/recombinase, phage integrase family protein hsdS 462433 - 460865 - | type I restriction-modification system, S subunit hsdM 463896 - 462433 - | type I restriction-modification system, M subunit TERM 555 463514 - 463531 + g 84 -7 -4.84274 | opp_overlap 463488 ATAACATTGATGACT TGGCGT AACAAG ACGCCA TTTTTCATATAGTTG hsdR 466242 - 463909 - | type I restriction-modification system, R subunit SPD_0456 466615 - 466815 + | hypothetical protein SPD_0457 466850 - 467359 + | hypothetical protein TERM 556 467387 - 467413 + F 100 -15.4 -5.30575 | TCTTCAGATTGATTT TTAGCACTCTTT ATA AAAGAGTGCTAA TTTTTTGAGTTTTTG TERM 557 467682 - 467670 - g 70 -3.4 -4.98255 | opp_overlap 467681 GCGGAACTAGAAAAA CAAG GGTTG CTTG AGAAGGCTCATACTT TERM 558 468074 - 468084 + G 73 -6.8 -4.28656 | TCAGGAACGTTTCCT CGGT CAC ACCG TTTTAGATATTCACT hrcA 467523 - 468557 + | heat-inducible transcription repressor grpE 468584 - 469108 + | heat shock protein GrpE TERM 559 469171 - 469157 - f 73 -8.6 -3.20858 | TAGGAGATTGACGAA GTGTTC GAT GAACAC AAGAAAATCTATCTT TERM 560 469517 - 469497 - f 73 -8.3 -3.67588 | overlap 469509 CAAAGTTTAGTCAAA GAGATTGAC GAA GTCAAGCTC TGACGGCGTCGCCAC dnaK 469588 - 471411 + | molecular chaperone DnaK TERM 561 471846 - 471868 + F 100 -9.9 -4.65895 | TAATTTACTTATTTG CAGAGGTTG CAACC CAGCCTCTG TTTTTCGATAAAAAG TERM 562 472253 - 472239 - g 70 -2.8 -5.02715 | opp_overlap 472240, overlap 472240 AGACGAAATCAAAAA GGCTTA TCG TAAGCT TTCCAAAAAATATCA TERM 563 473274 - 473248 - g 89 -4.4 -5.67283 | opp_overlap 473248, overlap 473236 AATCCAAAGAAAAAA GGCTTCTTTGAC CAT ATTAAAGATGCC TTTGATGGAGAATAA dnaJ 472171 - 473289 + | chaperone protein DnaJ TERM 564 473601 - 473626 + T 73 -9.1 -2.82529 | opp_overlap 473607, overlap 473607 ACTTGTTTACGTTTT AAAAAAGAGCC GGGG GGCTCTTTTTA CTTATCTTCAGTTCC TERM 565 473620 - 473607 - T 90 -8.1 -5.02074 | opp_overlap 473601 473607 TTACGTTTTAAAAAA GAGCC GGGG GGCTC TTTTTACTTATCTTC TERM 566 473607 - 473620 + T 90 -8.1 -4.99056 | opp_overlap 473607, overlap 473601 TTACGTTTTAAAAAA GAGCC GGGG GGCTC TTTTTACTTATCTTC SPD_0462 473911 - 473624 - | hypothetical protein SPD_0463 474331 - 473921 - | Hit-like protein involved in cell-cycle regulation, putative SPD_0464 474399 - 475130 + | ABC transporter, ATP-binding protein TERM 567 475643 - 475662 + G 70 -5.8 -4.4572 | gap 1, opp_overlap 475643 475642 TCTCAAGAAAGCAAG CGTAAGCAA GTC TTGCTT-CG TTTCTTTGCCCTCTT SPD_0465 475127 - 476176 + | ABC transporter, permease protein, putative TERM 568 476201 - 476228 + T 82 -4.2 -5.5112 | gap 1, opp_overlap 476193 TACGACACTAAAAAA GAAGTTGAGTTCA GTC TGT-CTCAGCTTC TTTTTTGTTACTACA SPD_0466 476673 - 476344 - | hypothetical protein blpS 476949 - 477287 + | BlpS protein TERM 569 477546 - 477516 - g 71 -7.6 -3.87869 | opp_overlap 477516 477518 GGAAGTGGCTAGAAA GATTCGGGAACAAG ACC CTTATGCCCTAATC GTCTTTGTGACGACT TERM 570 477955 - 477933 - g 70 -8.6 -3.31144 | opp_overlap 477937, overlap 477937 GGTGCATTTGGATAA GAAAGAAAAA CTC CTTTTCTTTC CCAATGGTGGAAGCT blpR 477292 - 478029 + | response regulator BlpR TERM 571 478391 - 478411 + G 75 -2.5 -5.2204 | overlap 478396 GGGCAAGGAATTGTA GATGGGGAT GGC AATCCTATC TTTTTATTGATTATG blpH 478043 - 479383 + | histidine kinase BlpH, putative TERM 572 479421 - 479391 - T 100 -11.3 -5.39755 | opp_overlap 479391 CAGAATGATAAAAAA CAAGACCGAGA GTTCTTGTT TCTCGGTCTTG TTTTTATAGCTGAAT TERM 573 479391 - 479421 + T 100 -12 -4.88067 | opp_overlap 479391 CAGAATGATAAAAAA CAAGACCGAGAG TTCTTGT TTCTCGGTCTTG TTTTTATAGCTGAAT blpC 479580 - 479425 - | peptide pheromone BlpC TERM 574 482045 - 482068 + H 77 -6 -4.69053 | opp_overlap 482045 AAATAATCTACAAAT TCGCTGTCTA TATT TTGATAGCGA TTTTCTTCACTCGTG blpY 483721 - 484410 + | immunity protein BlpY SPD_0474 484452 - 484685 + | hypothetical protein TERM 575 485400 - 485375 - g 72 -4.7 -4.82901 | CCTTGCTTATAAAAA GAGCCAAAACC TATG GGTTTCTACTC TAGTCCACATGTTTT SPD_0475 484836 - 485447 + | CAAX amino terminal protease family protein TERM 576 485460 - 485483 + F 76 -6.8 -4.61231 | opp_overlap 485454 485460 TAAAAATTATGAAAA GGTAAGCA GAAGACGG TGCTTACC TTTTTCAAGCTATAA TERM 577 485483 - 485460 - f 74 -6.8 -4.45077 | opp_overlap 485460, overlap 485454 TAAAAATTATGAAAA GGTAAGCA GAAGACGG TGCTTACC TTTTTCAAGCTATAA SPD_0476 485608 - 486402 + | hypothetical protein trmB 486399 - 487034 + | tRNA (guanine-N(7))-methyltransferase TERM 578 487122 - 487145 + F 87 -11 -3.44146 | opp_overlap 487121 487122 487124 AAGAATATGAAAAGT GAGGCGGGGA AATA TCTTCGCCTC TTGCTTATGAGGAGG SPD_0478 487160 - 487639 + | hypothetical protein nusA 487683 - 488819 + | transcription elongation factor NusA SPD_0480 488841 - 489134 + | hypothetical protein SPD_0481 489127 - 489426 + | hypothetical protein TERM 579 489603 - 489581 - g 70 -9.8 -2.60032 | opp_overlap 489563, overlap 489580 489579 GTCGCTGCAAAAATT GCTGCCAGCT TTA AGCCTGCAGC TGCTCCGAAAGTAGA TERM 580 489722 - 489710 - g 73 -6.9 -4.29928 | opp_overlap 489710 AAGGAAGAGGCAAAA CCGGC TGA GCCAG TTGCTCCGAAAACAG TERM 581 489912 - 489925 + G 70 -8.1 -3.72695 | opp_overlap 489911 AAGGTCAAAGCAACC GCGAC AATC GTCGC TTTAATGACCAAGCT infB 489443 - 492235 + | translation initiation factor IF-2 TERM 582 492327 - 492356 + F 100 -15.9 -3.53012 | opp_overlap 492321 TCTCAAAAATCCCCT GTGATGGGACTGA TAAA TCAGTTCCATCAC TTTCACCACGGCGAA TERM 583 492456 - 492437 - f 73 -7.8 -3.71291 | opp_overlap 492437, overlap 492435 AAGAAGTTTAAAATA GCTAGGTC TGCT GGCCTAGC TTTTGGTTCAAAGTA TERM 584 492437 - 492456 + F 100 -10 -4.41494 | opp_overlap 492437 492435 AAGAAGTTTAAAATA GCTAGGTC TGCT GGCCTAGC TTTTGGTTCAAAGTA TERM 585 492690 - 492678 - g 84 -6.9 -4.93365 | TCGGATAACCAAAAA GCCCA AAT CGGGC TTGAAAAAGCAACTG rbfA 492486 - 492836 + | ribosome-binding factor A TERM 586 492841 - 492855 + F 100 -11.4 -5.14563 | opp_overlap 492841 ATAAGAACTAAAGAA GAGGGG TTG CCCCTC TTTTTTGGTGGAGGA TERM 587 492855 - 492841 - f 100 -11.4 -4.1648 | opp_overlap 492841 ATAAGAACTAAAGAA GAGGGG TTG CCCCTC TTTTTTGGTGGAGGA SPD_0484 493079 - 493894 + | hypothetical protein SPD_0485 493896 - 494078 + | hypothetical protein SPD_0486 494075 - 494215 + | hypothetical protein TERM 588 494239 - 494260 + F 84 -5.9 -5.25893 | opp_overlap 494239 CCAAGTCGCAGAAAA CTAGCAG GAACTCCA CTGCTAG TTTTTTAATCTCTCT TERM 589 494260 - 494239 - f 72 -5.9 -4.4017 | gap 1, opp_overlap 494239 CCAAGTCGCAGAAAA CTAGCAG-GA ACT CCACTGCTAG TTTTTTAATCTCTCT TERM 590 494411 - 494393 - f 78 -10.4 -2.61383 | opp_overlap 494392 494409, overlap 494392 AGTTCTATCCACAAC CTCAAAAC GGT GTTTTGAG CTGACTTCGTCAGTT TERM 591 494409 - 494427 + F 76 -9.6 -2.87931 | opp_overlap 494393 494392, overlap 494392 494412 TCAAAACGGTGTTTT GAGCTGAC TTC GTCAGTTC TATCTACAACCTCAA TERM 592 494412 - 494424 + F 71 -7.7 -3.58905 | overlap 494409 AAACGGTGTTTTGAG CTGAC TTC GTCAG TTCTATCTACAACCT TERM 593 494456 - 494438 - f 78 -10.4 -2.61383 | overlap 494437 AGTTCTATCTACAAC CTCAAAAC ACT GTTTTGAG CAACCTGCGGCTAGC SPD_0487 494516 - 494761 + | hypothetical protein TERM 594 494781 - 494794 + G 74 -5.3 -4.68103 | opp_overlap 494774 AGATGAACGGATTCA TATCC TACG GGATA TTTTGTTAGAATTGC SPD_0488 494761 - 496095 + | hypothetical protein SPD_0489 496105 - 496359 + | hypothetical protein TERM 595 496414 - 496431 + F 82 -4.1 -5.4505 | AATGTTTATGTTAAA TCCTTGT CAGA GCAGGGA TTTTTTATTGAAAGG SPD_0490 496455 - 496850 + | hypothetical protein TERM 596 497045 - 497029 - f 71 -7.9 -3.5913 | opp_overlap 497028 TTTAAAGACTAAAGA TGCGGGC TTG GCCCGAA ATTGGGTGGTACCGC TERM 597 497076 - 497099 + F 89 -7.4 -5.24647 | overlap 497077 GGATAAACACATTCG TCCCTGTCAT GTAG ATGGCAGGGC TTTTCTTTTGTGTCT TERM 598 497077 - 497098 + F 90 -10.9 -3.72348 | overlap 497076 GATAAACACATTCGT CCCTGTCAT GTAG ATGGCAGGG CTTTTCTTTTGTGTC SPD_0491 497262 - 497711 + | hypothetical protein SPD_0492 497698 - 498255 + | acetyltransferase, GNAT family protein SPD_0493 498257 - 499219 + | hypothetical protein TERM 599 500016 - 499993 - g 85 -9 -4.183 | gap 1 CCAATCGCTAATAAA CTCATC-CCAA TCG TTGGAGATGAG CACGCAGATCCTGAG TERM 600 501774 - 501748 - g 76 -4.4 -5.00884 | overlap 501749 501752 ATGGTTGGCAAAAAA CTCAGCAACGAA CGC TTCGTCGCCAAC GCTAAACCAGAAGTT TERM 601 501770 - 501752 - g 71 -9.6 -2.92111 | overlap 501749 501748 TTGGCAAAAAACTCA GCAACGAA CGC TTCGTCGC CAACGCTAAACCAGA valS 499231 - 501882 + | valyl-tRNA synthetase TERM 602 501892 - 501908 + F 84 -5.8 -5.23316 | opp_overlap 501884 501892 AAATAAACACAGAAA CACGGT GATGA GCCGTG TTTTTTGGTATAATG SPD_0495 501952 - 502707 + | hypothetical protein TERM 603 503559 - 503571 + G 70 -3.3 -4.89009 | CGAAGGAAACACTCG GACAG TAA CGGTC TTTTTGATTCAGTAT SPD_0496 502990 - 503793 + | cell filamentation protein Fic-related protein TERM 604 503918 - 503950 + T 70 -4.2 -4.69549 | AATAATTTATCCGAA GGATTTAGTTCTGT ATTGC ACAAGGCTAAGTCC TTTTAGTTTTACCTT SPD_0499 505159 - 504947 - | hypothetical protein TERM 605 505165 - 505211 + H 89 -11.8 -3.26471 | opp_overlap 505168, overlap 505168 505170 505205 TTAATTTCATAATAA AAACACCCCAAAAGTTAGAT TTTTTCT GTCTAACTTTTGGGGTGTAG TTCATGTACACCTGA TERM 606 505168 - 505208 + H 100 -17.9 -2.81547 | opp_overlap 505168, overlap 505165 505170 505205 ATTTCATAATAAAAA CACCCCAAAAGTTAGAT TTTTTCT GTCTAACTTTTGGGGTG TAGTTCATGTACACC TERM 607 505208 - 505168 - H 100 -17.2 -5.19328 | opp_overlap 505165 505168 505170 505205 ATTTCATAATAAAAA CACCCCAAAAGTTAGA TTTTTTCTG TCTAACTTTTGGGGTG TAGTTCATGTACACC TERM 608 505170 - 505206 + H 95 -14.7 -2.95521 | opp_overlap 505168, overlap 505168 505165 505205 TTCATAATAAAAACA CCCCAAAAGTTAGAT TTTTTCT GTCTAACTTTTGGGG TGTAGTTCATGTACA TERM 609 505376 - 505412 + H 79 -5.3 -5.14985 | gap 1, opp_overlap 505376 505378 TATTCTTGTTATAAT CAGCCTATAGGAATCA AGGAGG TGACTCTTAT-GGCTG TTTTTGTGTCTTTGG TERM 610 507689 - 507673 - H 70 -7.3 -3.87641 | AAGATGTTTCAGAAA CGACAAG TAG CTTATCG AAAGATGGATTATCG TERM 611 508324 - 508378 + H 83 -6.1 -5.07652 | gap 2, opp_overlap 508340, overlap 508340 508374 508375 TAATACAAGTGAGCA GGAACCTATTT-AATCACATCA-GAAG AAG TTTCTTGATGTTTTTTAAGTAGGTTCC TTTTATTTTAAAAGG TERM 612 508340 - 508361 + H 71 -3.1 -5.10497 | gap 1, opp_overlap 508340, overlap 508324 GAACCTATTTAATCA CATCA-GAAG AAG TTTCTTGATG TTTTTTAAGTAGGTT licT 508402 - 509241 + | transcription antiterminator Lict TERM 613 510399 - 510387 - g 81 -2.6 -5.63645 | TTAAAATATAAAAAA CCGC TTTAT GCAG CTATGATTGGTGGTG SPD_0502 509259 - 511097 + | PTS system, beta-glucosides-specific IIABC components bglA-2 511110 - 512525 + | 6-phospho-beta-glucosidase TERM 614 512630 - 512578 - f 83 -9.6 -3.75169 | opp_overlap 512585 512589 512617, overlap 512585 512589 CAGCATCTCATTAAA TATGAAATAAAGAGGTTTGGAA GACATCAAA TTCTAAACCTCTTTATTTTATA GGGGGATTAATTAAT TERM 615 512585 - 512623 + F 100 -9.9 -4.37658 | opp_overlap 512585 512578 512589, overlap 512589 512617 TCATTAAATATGAAA TAAAGAGGTTTGGAA GACATCAAA TTCTAAACCTCTTTA TTTTATAGGGGGATT TERM 616 512623 - 512585 - f 76 -7.7 -4.02719 | opp_overlap 512585 512589 512617, overlap 512578 512589 TCATTAAATATGAAA TAAAGAGGTTTGGAA GACATCAAA TTCTAAACCTCTTTA TTTTATAGGGGGATT TERM 617 512589 - 512619 + F 80 -6.3 -4.77173 | opp_overlap 512589 512585 512578, overlap 512585 512617 TAAATATGAAATAAA GAGGTTTGGAA GACATCAAA TTCTAAACCTC TTTATTTTATAGGGG TERM 618 513042 - 513080 + F 82 -5.3 -5.38839 | gap 1, overlap 513055 TGAAAACGGATGGTA CCGCGTGTCA-ACGCTCC GAGT GGAGTTTTTGGCATGTGG TTTTCTTTTTATCTA TERM 619 513055 - 513066 + F 77 -5.8 -4.65168 | overlap 513042 TACCGCGTGTCAACG CTCC GAGT GGAG TTTTTGGCATGTGGT TERM 620 513162 - 513144 - g 79 -6.7 -4.61824 | GAAGAACAATTAAAA GCGCTTC GCGAA GAAACGC TGACTAGCTTGAAGC TERM 621 513499 - 513469 - g 73 -7.6 -4.03413 | opp_overlap 513463 ACGTTTTGACACAAA CCAGTGAAGAAATC GAA GATATCTTCATCGG TATGGGTTATCAAGT pheS 513117 - 514163 + | phenylalanyl-tRNA synthetase subunit alpha SPD_0505 514163 - 514672 + | acetyltransferase, GNAT family protein TERM 622 517124 - 517108 - g 79 -5.1 -5.1287 | overlap 517110 GCTATATGGAAAAAA TCCAAGC ATC GCTCGAA GAAAAAGTCAATGCA pheT 514749 - 517151 + | phenylalanyl-tRNA synthetase subunit beta TERM 623 517203 - 517170 - T 71 -6.7 -4.10566 | opp_overlap 517171 517173, overlap 517171 ATAGTATGATACAAA TTCCCCCTCTAGTTT ATGA ACACTAGAGGGGTGA TTTTATATAAAATAA TERM 624 517203 - 517171 - T 77 -10 -3.05616 | gap 1, opp_overlap 517171 517173, overlap 517170 TAGTATGATACAAAT TC-CCCCTCTAGTTT ATGA ACACTAGAGGGGTGA TTTTATATAAAATAA TERM 625 517171 - 517203 + T 100 -10 -4.54047 | gap 1, opp_overlap 517170 517171, overlap 517173 TAGTATGATACAAAT TC-CCCCTCTAGTTT ATGA ACACTAGAGGGGTGA TTTTATATAAAATAA TERM 626 517173 - 517200 + T 91 -12.8 -3.22094 | opp_overlap 517170 517171, overlap 517171 GTATGATACAAATTC CCCCTCTAGTTT ATGA ACACTAGAGGGG TGATTTTATATAAAA SPD_0507 518220 - 517219 - | hypothetical protein TERM 627 518488 - 518460 - H 83 -7.5 -4.72772 | opp_overlap 518467, overlap 518461 518465 AAAAAAGAAGGAAAA TCAAATAGAGAAG TTG CCTCTCTACTTGG AAAAGCTCCTCAAAC TERM 628 518487 - 518461 - H 87 -11 -3.40003 | opp_overlap 518467, overlap 518460 518465 AAAAAGAAGGAAAAT CAAATAGAGAAG TTG CCTCTCTACTTG GAAAAGCTCCTCAAA TERM 629 518483 - 518465 - H 83 -8.2 -4.27965 | opp_overlap 518467, overlap 518461 518460 AGAAGGAAAATCAAA TAGAGAAG TTG CCTCTCTA CTTGGAAAAGCTCCT SPD_0509 518949 - 519215 + | hypothetical protein TERM 630 519329 - 519352 + F 74 -2.4 -5.54907 | ACAAGCTATACAAAG GATTTGAGAC GTTT GCTTCAAGTC TTTTTCTTTTGTCCG metE 519476 - 521725 + | 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase TERM 631 522601 - 522589 - g 70 -7.7 -3.76482 | CTATACGATGAATAA TGCTG ATA CAGCA AAATACATCCATCAA metF 521789 - 522655 + | 5,10-methylenetetrahydrofolate reductase TERM 632 522691 - 522666 - f 72 -6.1 -4.35361 | opp_overlap 522666 522685, overlap 522661 GATAATAAAAGCAAA CCATTCTTCTC AGGT GAGGGGAATGG TTCCTTTTTAATGGT TERM 633 522666 - 522691 + F 87 -10.5 -3.85504 | opp_overlap 522666 522661, overlap 522685 GATAATAAAAGCAAA CCATTCTTCTC AGGT GAGGGGAATGG TTCCTTTTTAATGGT TERM 634 522685 - 522695 + F 74 -5.4 -4.77036 | opp_overlap 522666 522661, overlap 522666 TCTTCTCAGGTGAGG GGAA TGG TTCC TTTTTAATGGTAAAG TERM 635 522861 - 522899 + F 73 -7.6 -3.74626 | gap 1, opp_overlap 522861, overlap 522852 GAGAGAGTTAGTAAA GCATTTA-GCTAATCGC CCGATA GCGATTAGCGTGAAAGC TTTAGATACTTTAGT TERM 636 523163 - 523148 - f 71 -9 -3.01726 | overlap 523147 TTTTTCTACAGAAAT GTTCGG CAAG CCGAAC CGTCCAAAATATCTT pnp 523226 - 525553 + | polynucleotide phosphorylase/polyadenylase cysE 525569 - 526186 + | serine O-acetyltransferase TERM 637 526325 - 526373 + G 71 -6 -4.24285 | opp_overlap 526329 526332 TGCTTAATTTTGACC CAAACATGCCCGCCTTTTTCCT TTATT ATGAAAAAGGCGAACTTGTTGG TTTATTAACTGTCTA TERM 638 526369 - 526329 - g 79 -9.8 -3.65827 | opp_overlap 526325, overlap 526332 TAATTTTGACCCAAA CATGCCCGCCTTTTTCCT TTATT ATGAAAAAGGCGAACTTG TTGGTTTATTAACTG TERM 639 526366 - 526332 - g 72 -10.1 -2.64144 | opp_overlap 526325, overlap 526329 TTTTGACCCAAACAT GCCCGCCTTTTTCCT TTATT ATGAAAAAGGCGAAC TTGTTGGTTTATTAA SPD_0514 526198 - 527082 + | acetyltransferase, GNAT family protein TERM 640 528399 - 528388 - g 83 -7.2 -4.66609 | GACTTGATTCAAAAA CGCC AAGA GGCG CGTGCCAATCGAGAC cysS 527164 - 528507 + | cysteinyl-tRNA synthetase SPD_0516 528500 - 528886 + | hypothetical protein SPD_0517 528890 - 529774 + | hypothetical protein TERM 641 529788 - 529814 + F 100 -10.3 -4.96848 | gap 1, opp_overlap 529787 529786 AAAGAAGTTAATATT TGGAGAAGA-GG ATTG CCATCTTCTCCA TTTTTATGTGCAGAG SPD_0518 529911 - 530366 + | hypothetical protein SPD_0519 530363 - 530509 + | hypothetical protein SPD_0520 530655 - 530828 + | transposase, putative, truncation TERM 642 530962 - 530996 + F 79 -9.3 -3.50953 | opp_overlap 530967, overlap 530967 TTAAACGTGCTATAT CAAAACCAGTCCTTG GAAAA CGTGGACTGGTTTCG TGTTTGGATTATTAC TERM 643 530967 - 530991 + F 76 -7.8 -4.02206 | opp_overlap 530967, overlap 530962 CGTGCTATATCAAAA CCAGTCCTTG GAAAA CGTGGACTGG TTTCGTGTTTGGATT vex1 531180 - 532457 + | ABC transporter, transmembrane protein Vexp1 vex2 532470 - 533117 + | ABC transporter, ATP-binding protein Vexp2 vex3 533169 - 534548 + | ABC transporter, transmembrane protein Vexp3 TERM 644 534642 - 534673 + F 89 -8.8 -4.58946 | opp_overlap 534642 534641, overlap 534639 534644 CAATTCAAAATAAAT CCGAAAGCAGTGGT GAAA ATCATTGCTTTCAG TTGTTTTCTTTGTAC TERM 645 534644 - 534671 + F 75 -10 -2.58618 | opp_overlap 534642 534641, overlap 534642 534639 ATTCAAAATAAATCC GAAAGCAGTGGT GAAA ATCATTGCTTTC AGTTGTTTTCTTTGT TERM 646 535361 - 535345 - g 74 -5.1 -4.67353 | CTATCTAGTGAAAAA TGAAGGC CGG GCCTTGA CTCGGTCTCAGATTA vncR 534860 - 535516 + | DNA-binding response regulator VncR vncS 535513 - 536841 + | sensor histidine kinase VncS fba 536982 - 537863 + | fructose-bisphosphate aldolase TERM 647 537888 - 537905 + T 74 -3.3 -5.37593 | opp_overlap 537879 537888 ATAATACAGATAAAA CCTGCCT GTGA GGGTGGG TTTTTTGATTTCAAG TERM 648 538151 - 538174 + T 88 -13.2 -3.0003 | opp_overlap 538151, overlap 538146 TTTGGCTATAAAAAA CTCTCCTGGG AAAT TCCAGGAGAG TATGATTACTTATTT TERM 649 538174 - 538151 - T 100 -12.5 -5.24129 | opp_overlap 538146 538151 TTTGGCTATAAAAAA CTCTCCTGG GAAATT CCAGGAGAG TATGATTACTTATTT SPD_0527 539374 - 538184 - | oxidoreductase, putative TERM 650 539510 - 539490 - R 100 -10.5 -5.14965 | opp_overlap 539487 ACTCTCATCAAAAAA CTCTCCAAT TGA ACTGGAGAG TGGCTGTTTATACTC SPD_0528 540291 - 539632 - | amino acid ABC transporter, permease protein SPD_0529 540978 - 540301 - | amino acid ABC transporter, permease protein TERM 651 540599 - 540587 - G 77 -7.7 -4.26188 | CTGATATAGGTAAAA CCTTG CGA CAAGG CGGCCTCCATCTGAC SPD_0530 541785 - 540991 - | amino acid ABC transporter, amino acid-binding protein TERM 652 542455 - 542470 + H 82 -7.6 -4.56597 | opp_overlap 542446 542455 CAGAAGGTCCAAGCA GGACAA CAAC TTGTCC TTTTTCAAAACGGAG TERM 653 542646 - 542635 - H 82 -4.4 -5.45726 | CATATCTGAAAAAAA TCAC TATA GTGA AATAAGAACAGGACA recJ 542831 - 545053 + | single-stranded-DNA-specific exonuclease RecJ TERM 654 545065 - 545082 + F 83 -6.3 -5.00616 | opp_overlap 545065 545080 545081 GTAGAAGTTAGGAAA GAGTTGG GAAA TCAACTC TTTTTTGAAAACAGA TERM 655 545299 - 545309 + G 89 -5.4 -5.48213 | opp_overlap 545299 GTACATTGCTGAAAT TGGA GAG TCCA TTTTTGTTTTGAATG SPD_0533 545228 - 546889 + | metallo-beta-lactamase superfamily protein TERM 656 546907 - 546931 + F 79 -10.1 -3.29511 | opp_overlap 546907 546913, overlap 546913 GTTGAAATAAACAGA GAGAAAGTCGA GTT TCGGCTTTTTC TTATAGAAAAATAGA TERM 657 546913 - 546925 + F 79 -5.5 -5.18726 | opp_overlap 546907 546913, overlap 546907 ATAAACAGAGAGAAA GTCGA GTT TCGGC TTTTTCTTATAGAAA TERM 658 547547 - 547533 - g 71 -4.2 -4.90296 | overlap 547535 AAAATCGGATAAAAA GACCAA ACT TTGGGC GTGGTGTGGCGAACA estA 546958 - 547737 + | tributyrin esterase TERM 659 548000 - 548017 + G 74 -6.3 -4.41494 | opp_overlap 548000 ACAGGGAAGAAAAAT TACTGGC GACA GCTAGTA TTTTGATTAGAACTC murM/fibA 547849 - 549069 + | serine/alanine-adding enzyme MurM TERM 660 549888 - 549874 - g 74 -5 -4.7373 | overlap 549876 TGATTTGAGTAAAAA TCCTCA TTC TGAGAA AAAACAAAATCAACT fibB 549074 - 550306 + | beta-lactam resistance factor TERM 661 550571 - 550549 - g 93 -10 -4.73388 | AACGGTCAGTAAAAA TTGGTCAACA AAG TATTGACCAA TGGGAGAAAACAGGG SPD_0537 550422 - 551081 + | hypothetical protein TERM 662 551078 - 551099 + F 85 -4.4 -5.59357 | ATATGAGACTAGTGA GTAGGGTA CTATCT TTCCCTAC TTTTTTTGCTATAAT uvrC 551121 - 552965 + | excinuclease ABC subunit C SPD_0539 552955 - 553788 + | Ser/Thr protein phosphatase family protein TERM 663 553843 - 553823 - T 100 -11.2 -5.38497 | opp_overlap 553823 ATGCAAACTAAAAAA GCGATTGG CTGGT CCAATCGC TTTTAGTATATCTTA TERM 664 553823 - 553843 + T 100 -11.2 -4.4296 | opp_overlap 553823 ATGCAAACTAAAAAA GCGATTGG CTGGT CCAATCGC TTTTAGTATATCTTA SPD_0540 554770 - 553970 - | amino acid ABC transporter, amino acid-binding protein, putative TERM 665 554612 - 554599 - G 71 -6.7 -4.08216 | CTACTGCCTTTAAAA CTTCG ATAT CGAAG CCTGTCAGATTGCCC SPD_0541 554941 - 555546 + | nitroreductase family protein pepV 555559 - 556959 + | dipeptidase PepV SPD_0543 557013 - 557591 + | hypothetical protein SPD_0544 557755 - 557907 + | hypothetical protein SPD_0545 557908 - 558042 + | hypothetical protein TERM 666 558053 - 558084 + F 95 -8.8 -5.2853 | overlap 558054 TTTAAAATTTTGCAT TTCTCCTACTTGGT GTGG ACTGGGTAGGAGAG TTTTATTTTTAGATA TERM 667 558054 - 558083 + F 83 -10.1 -3.75491 | overlap 558053 TTAAAATTTTGCATT TCTCCTACTTGGT GTGG ACTGGGTAGGAGA GTTTTATTTTTAGAT TERM 668 558138 - 558149 + F 76 -4.4 -5.03715 | AAACATTTAATATTT GCAT CGTG ATGC TTTTTTCAGACTCCT TERM 669 558324 - 558337 + G 86 -8.1 -4.89567 | GGAGAACATTTTCTT CCTGC CATC GCAGG TTTTGTCTTTTCAGG brnQ 558213 - 559538 + | branched-chain amino acid transport system II carrier protein TERM 670 559649 - 559688 + F 93 -8.1 -5.626 | opp_overlap 559654 GATTTTCATTGAGTA TAAAATCACTTTTGTAG TCAAGT CTACAGGAGTGATTTTC TTTTTTTATCCGATG TERM 671 560595 - 560608 + GF 71 -5.3 -4.5442 | ATATTCCATTTAAGC TGGAT ATCT ATCCA TTTTATGGTTCGGAC SPD_0547 559742 - 560779 + | hypothetical protein SPD_0548 560748 - 561251 + | HIT family protein TERM 672 561478 - 561461 - g 73 -8.5 -3.77219 | AGCATTCAAGGGAAA TACGATG AAAT CATCGTA GCCAACAAACACTAT SPD_0549 561254 - 561970 + | hypothetical protein TERM 673 562061 - 562043 - f 78 -10.4 -2.61264 | opp_overlap 562042, overlap 562042 GGTTCTATTCACAAC CTCAAAAC AGT GTTTTGAG CTGACTTCGTCAGTT TERM 674 562062 - 562074 + F 82 -7.7 -4.52857 | AAACAGTGTTTTGAG CTGAC TTC GTCAG TTTTATCTGCAACCT TERM 675 562534 - 562493 - g 71 -6.5 -4.25104 | overlap 562496 CTTTCGTTACGAAAA CACCACCAGCTGCTGTTCT TTTG AAAAAAGCTGCAGGTGTTG AAAAAGGATCAGGTA rplK 562279 - 562704 + | 50S ribosomal protein L11 TERM 676 563493 - 563464 - g 83 -7.3 -4.66833 | TTTGAAGCTGAAAAA TTGGTTGAAAACT TTAA AGCTTTCAACGAA ACAATCCAAAAAGCA rplA 562912 - 563601 + | 50S ribosomal protein L1 TERM 677 563627 - 563648 + TF 89 -6.7 -5.58454 | gap 1, opp_overlap 563627 AACTAATGTAAAAAA GTTGAAGACA CTA TGTCT-CAAC TTTTTTTGATGTACG TERM 678 563648 - 563627 - Tf 84 -6.7 -5.1848 | gap 1, opp_overlap 563627 AACTAATGTAAAAAA GTTGAAGACA CTA TGTCT-CAAC TTTTTTTGATGTACG TERM 679 564004 - 564038 + TF 79 -9.3 -3.50953 | opp_overlap 564009, overlap 564009 TTAAACGTGCTATAT CAAAACCAGTCCTTG AAAAA CGTGGACTGGTTTCG TGTTTGGATTATTAC TERM 680 564009 - 564033 + TF 76 -7.8 -4.02206 | opp_overlap 564009, overlap 564004 CGTGCTATATCAAAA CCAGTCCTTG AAAAA CGTGGACTGG TTTCGTGTTTGGATT SPD_0552 564780 - 564193 - | hypothetical protein TERM 681 564298 - 564280 - Gf 78 -10.4 -2.61383 | opp_overlap 564279, overlap 564279 564289 AGTTCTATCCACAAC CTCAAAAC AGT GTTTTGAG CTGACTTCGTCAGTT TERM 682 564343 - 564325 - Gf 78 -10.4 -2.61383 | opp_overlap 564324, overlap 564324 564334 AGTTCTATCCACAAC CTCAAAAC AGT GTTTTGAG CTGACTTCGTCAGTT TERM 683 564388 - 564370 - Gf 78 -10.4 -2.61383 | overlap 564369 564379 AGTTCTATCCACAAC CTCAAAAC AGT GTTTTGAG CTGACTACGTCAGTT TERM 684 564433 - 564415 - Gf 78 -10.4 -2.61383 | opp_overlap 564414, overlap 564414 564424 AGTTCTATCCACAAC CTCAAAAC AGT GTTTTGAG CTGACTTCGTCAGTT TERM 685 564478 - 564460 - Gf 78 -10.4 -2.61383 | opp_overlap 564459, overlap 564459 564469 AGTTCTATCCACAAC CTCAAAAC AGT GTTTTGAG CTGACTTCGTCAGTT TERM 686 564523 - 564505 - Gf 78 -10.4 -2.61383 | overlap 564504 564514 AGTTCTATCCACAAC CTCAAAAC AGT GTTTTGAG CTGACTACGTCAGTT TERM 687 564568 - 564550 - Gf 78 -10.4 -2.61383 | opp_overlap 564549, overlap 564549 564559 AGTTCTATCCACAAC CTCAAAAC AGT GTTTTGAG CTGACTTCGTCAGTT TERM 688 564613 - 564595 - Gf 78 -10.4 -2.61383 | overlap 564594 AGTTCTATCCACAAC CTCAAAAC AGT GTTTTGAG CTGACTACGTCAGTT TERM 689 564658 - 564640 - Gf 78 -10.4 -2.61383 | opp_overlap 564656, overlap 564639 AGTTCCATCTACAAC CTCAAAAC AGT GTTTTGAG CAACCTGAGGCTAGT SPD_0553 564746 - 565075 + | hypothetical protein SPD_0554 566119 - 567111 + | ABC transporter, ATP-binding protein SPD_0555 567113 - 567931 + | hypothetical protein SPD_0556 567933 - 568718 + | hypothetical protein TERM 690 569018 - 569008 - f 77 -5.4 -4.92314 | opp_overlap 569008 ATCAAGGTAGAAAAA TTGG GAG CCAA TTGCTTGCTACTTTA TERM 691 569359 - 569387 + F 83 -8.3 -4.41237 | opp_overlap 569357 569359 569362 TAGATAGGTAGAAGA TAACCGTTAAG CCTTATT CTTAGCGGTTA TTTATATTGTTTAAT TERM 692 569630 - 569612 - f 78 -10.4 -2.61383 | opp_overlap 569611, overlap 569611 AGTTCTATCCACAAC CTCAAAAC AGT GTTTTGAG CTGACTTCGTCAGTT TERM 693 569675 - 569657 - f 78 -10.4 -2.61383 | overlap 569656 AGTTCCATCTACAAC CTCAAAAC AGT GTTTTGAG CAACCTGCGGCTAGT prtA 569948 - 576382 + | cell wall-associated serine protease PrtA TERM 694 576642 - 576672 + F 100 -9.9 -5.27335 | overlap 576669 ATGAGACAATTTCAA GGAATTAAGTAGC GTTTG GTTGCTTAATTCC TTTTTATTTGGAAGG TERM 695 576695 - 576734 + F 100 -16 -2.81312 | gap 1, opp_overlap 576691 576690 TTGGAAGGAAGTTTT TCGTAACCGCCCAATA-AC GAA GTCTATTGGACGGTTACGA TATGATCACTGACTT TERM 696 576787 - 576769 - f 78 -10.4 -2.61383 | overlap 576768 AGTCTTATCTACAAC CTCAAAAC TGT GTTTTGAG CAACCTGCGGCTAGC TERM 697 577448 - 577434 - g 74 -5 -4.76644 | AAGACCTATCAAAAA TTTCCG AAC CAGAAA AACTTTATGCTTACA SPD_0559 577007 - 577483 + | PTS system IIA component, putative SPD_0560 577521 - 577826 + | PTS system, IIB component, putative SPD_0561 577874 - 579349 + | PTS system, IIC component, putative TERM 698 579461 - 579479 + F 78 -10.4 -2.61383 | opp_overlap 579446 579460, overlap 579460 GACTGACGAAGTCAG CTCAAAAC ATG GTTTTGAG GTTGTAGATGAAACT TERM 699 579505 - 579493 - f 73 -7.7 -3.83205 | AGGTTGTAGATGAAA CTGAC GAA GTCAG TAATCATACATACGG TERM 700 582982 - 582972 - g 70 -5.4 -4.34263 | GCCGAAGAAGATAAA GCTA AGT TAGC AATTCCAGGTTCTCG bgaA 579654 - 586340 + | beta-galactosidase precursor, putative TERM 701 586840 - 586821 - T 84 -12.2 -2.87132 | opp_overlap 586823, overlap 586823 GCGTTCGTTCATATA CAGTCCCT TTTG AGGGACTG ATTCAGGTTCATCAG TERM 702 586838 - 586823 - T 71 -9 -2.98823 | opp_overlap 586823, overlap 586821 GTTCGTTCATATACA GTCCCT TTTG AGGGAC TGATTCAGGTTCATC TERM 703 587098 - 587118 + T 74 -6.1 -4.63218 | overlap 587099 TCTGTTCTTGAAGTT TGGCGGAGA ATT TCTCTGTCG TTTTCTTCCACACAA TERM 704 587513 - 587531 + T 100 -10.3 -5.42259 | opp_overlap 587513 AACCATGCAAAAAAA GCAACGG CAAAT CCGTTGC TTTTTTTGGAGATAA TERM 705 587531 - 587513 - T 100 -10.3 -5.49729 | opp_overlap 587513 AACCATGCAAAAAAA GCAACGG CAAAT CCGTTGC TTTTTTTGGAGATAA SPD_0564 588007 - 587654 - | hypothetical protein TERM 706 588179 - 588167 - g 74 -6.3 -4.37092 | opp_overlap 588154, overlap 588154 ACTCTTTGGAGAAAA GACTT TTA AAGTC CCTATTGATGCGGAA SPD_0565 588105 - 588557 + | hypothetical protein SPD_0566 588615 - 589061 + | hypothetical protein SPD_0567 589039 - 589602 + | hypothetical protein SPD_0568 589595 - 589849 + | hypothetical protein SPD_0569 589861 - 591915 + | sodium/hydrogen exchanger family protein TERM 707 591974 - 591990 + F 87 -10.9 -3.48924 | TTACCGTATGTATGT GACTGAC TTC GTCAGTC TTATCTACAACCTCA TERM 708 592020 - 592002 - f 78 -10.4 -2.61383 | overlap 592001 AGTCTTATCTACAAC CTCAAAAC AGT GTTTTGAG CAGCTTGCGGCTAGC TERM 709 592126 - 592140 + G 75 -2.8 -5.2166 | opp_overlap 592126, overlap 592128 AGAGCTGATAGACAA GCCTTT ATT AAAAGC TTTTTTGCATTATTA SPD_0570 592094 - 592954 + | ribonuclease BN, putative TERM 710 592966 - 593023 + F 100 -18.1 -3.7046 | opp_overlap 592974, overlap 592969 592974 CTAACTATTTATCCA TTACAAAAGCGCATAGTATCAAGGCTT TATA GAATCTTGATACTATGCGCTTTTGTGC TTTGACAGTTTTTTG TERM 711 592969 - 593020 + F 100 -22 -2.93783 | opp_overlap 592974, overlap 592966 592974 ACTATTTATCCATTA CAAAAGCGCATAGTATCAAGGCTT TATA GAATCTTGATACTATGCGCTTTTG TGCTTTGACAGTTTT TERM 712 592974 - 593015 + F 100 -16.1 -4.61566 | opp_overlap 592974, overlap 592969 592966 TTATCCATTACAAAA GCGCATAGTATCAAGGCTT TATA GAATCTTGATACTATGCGC TTTTGTGCTTTGACA TERM 713 593015 - 592974 - f 100 -15.4 -4.4767 | opp_overlap 592969 592966 592974 TTATCCATTACAAAA GCGCATAGTATCAAGGCT TTATAG AATCTTGATACTATGCGC TTTTGTGCTTTGACA TERM 714 593164 - 593174 + F 79 -4 -5.49579 | TGATAGGAGGAACTT TATG GGT CATA TTTTCTTTTTTCTAA TERM 715 593205 - 593215 + G 70 -5.4 -4.39226 | GTGTCTTTTTGGCAG GGAT TCT ATCC TTCTTTTCTCCTTGT ccdA-1 593165 - 593875 + | cytochrome c-type biogenesis protein CcdA TERM 716 593922 - 593937 + G 74 -6.1 -4.42464 | overlap 593919 CAAACATGTGTTCTT GGAGC AGGTTC GCTCC TTTGTTTGACGGCTT SPD_0572 593895 - 594461 + | thioredoxin family protein TERM 717 594915 - 594929 + G 73 -8.6 -3.6761 | overlap 594914 AAATGATGTGGGGAC CCAGTA CCG TACTGG TGTTTATTACACAGA msrAB2 594649 - 595584 + | bifunctional methionine sulfoxide reductase A/B protein TERM 718 595642 - 595654 + F 82 -7.7 -4.52857 | CCGTATGTAGGGTTA CTGAC TTC GTCAG TTTTATCTACAACCT TERM 719 595687 - 595699 + F 88 -7.7 -4.87133 | AAGCTATACTTTGAG CTGAC TTC GTCAG TTTTATTTACAACCT SPD_0574 595852 - 596589 + | DNA-binding response regulator TERM 720 596576 - 596601 + F 81 -7.6 -4.42238 | opp_overlap 596575 596578 GTCAGTTTAAGAAGG GAGAAGACCG ATGAAG CGTTCTTCTC TTTTAGTTAGAATGG SPD_0575 596586 - 598277 + | sensor histidine kinase, putative TERM 721 598278 - 598297 + F 93 -9.3 -4.44915 | opp_overlap 598278 ATAGAAACTAGCTAA CTCCCAG TCAATT CTGGGAG TTTTATGCGTAATTG TERM 722 598297 - 598278 - f 77 -9.3 -3.182 | opp_overlap 598278 ATAGAAACTAGCTAA CTCCCAG TCAATT CTGGGAG TTTTATGCGTAATTG SPD_0576 598393 - 598956 + | hypothetical protein zmpB 598978 - 604608 + | zinc metalloprotease ZmpB TERM 723 604630 - 604656 + F 70 -3.8 -4.95758 | gap 1, opp_overlap 604623, overlap 604619 604652 ATAAAATCGTAAAAA GGTAGAT-CAG CTTTGT CTGTATCTGCC TTTTTATGCTATACT TERM 724 605205 - 605217 + G 79 -4.8 -5.00884 | GGCAGTAATTTCCAT GAGC CCAGA GCTC TTTTTTGAGCAAAAT pabB 604678 - 606399 + | para-aminobenzoate synthase, component I SPD_0579 606557 - 607546 + | pneumococcal surface protein, putative TERM 725 607585 - 607620 + F 77 -9.2 -3.21778 | opp_overlap 607588, overlap 607584 607588 GAAAAAAATTCCTTA TAATTCACTTACGCAA ACCT TTGCATAAGTGAATGA ATTTTGATATACTAG TERM 726 607588 - 607617 + F 81 -10.9 -2.79239 | opp_overlap 607588, overlap 607585 607584 AAAAATTCCTTATAA TTCACTTACGCAA ACCT TTGCATAAGTGAA TGAATTTTGATATAC TERM 727 607617 - 607588 - f 91 -13.1 -3.3341 | opp_overlap 607585 607584 607588 AAAAATTCCTTATAA TTCACTTACGCAA ACCT TTGCATAAGTGAA TGAATTTTGATATAC gki 607682 - 608641 + | glucokinase TERM 728 608647 - 608692 + F 80 -5 -5.34555 | gap 1, opp_overlap 608652 608660 608662, overlap 608652 ATTGCAATAAGATAA TGAGAGAGGAA-AATGCTAAC CTAGA GTTAGTAATGTTCCTCTTTTA TTTTTTATGCTATAC TERM 729 608652 - 608687 + F 83 -4.9 -5.49579 | gap 1, opp_overlap 608652 608660 608662, overlap 608647 AATAAGATAATGAGA GAGGAA-AATGCTAAC CTAGA GTTAGTAATGTTCCTC TTTTATTTTTTATGC thyA 608738 - 609577 + | thymidylate synthase TERM 730 609587 - 609620 + T 81 -8.3 -4.18934 | opp_overlap 609592, overlap 609592 ATTTAAAAGAATAGA AAAAAGAAGTTGAGA ATAA TCCCAACTTCTTTTG TTTCTTAACGTGATA TERM 731 609592 - 609615 + T 90 -8.2 -5.09762 | opp_overlap 609592, overlap 609587 AAAGAATAGAAAAAA GAAGTTGAGA ATAA TCCCAACTTC TTTTGTTTCTTAACG TERM 732 609615 - 609592 - T 100 -10.4 -5.57729 | opp_overlap 609592 609587 AAAGAATAGAAAAAA GAAGTTGAGA ATAA TCCCAACTTC TTTTGTTTCTTAACG TERM 733 609637 - 609651 + T 77 -4.9 -5.15117 | TTCTTAACGTGATAC GCGGC GACGA GCTGC TTTTTTACGGTTTTC SPD_0582 609795 - 609625 - | hypothetical protein TERM 734 610120 - 610136 + G 80 -6.5 -4.81644 | opp_overlap 610121, overlap 610121 GATGTTAGAGAGATA ACCGAGT CTT ACTCGGC TTTTGATTTTGTTTC TERM 735 610135 - 610121 - g 80 -10 -3.64466 | opp_overlap 610121 610120 ATGTTAGAGAGATAA CCGAGT CTT ACTCGG CTTTTGATTTTGTTT TERM 736 610121 - 610135 + G 79 -10 -3.46546 | opp_overlap 610121, overlap 610120 ATGTTAGAGAGATAA CCGAGT CTT ACTCGG CTTTTGATTTTGTTT miaA 609916 - 610800 + | tRNA delta(2)-isopentenylpyrophosphate transferase hflX 610793 - 612031 + | GTP-binding protein HflX SPD_0585 612024 - 612647 + | hypothetical protein rnz 612662 - 613591 + | ribonuclease Z SPD_0587 613612 - 614367 + | oxidoreductase, short chain dehydrogenase/reductase family protein TERM 737 614365 - 614416 + T 79 -8.2 -3.91144 | opp_overlap 614371, overlap 614371 614374 ACTTTTAATTATAAG TAAAAAGAACCAATGTGCAGGTTG TTGC TAGCCTACATATTGGTTCTTATCA TTTCTCAACTATCAA TERM 738 614410 - 614371 - T 95 -8.7 -4.95876 | opp_overlap 614365 614371 614374 AATTATAAGTAAAAA GAACCAATGTGCAGGTT GTTGCT AGCCTACATATTGGTTC TTATCATTTCTCAAC TERM 739 614371 - 614410 + T 90 -11.6 -3.64915 | opp_overlap 614371, overlap 614365 614374 AATTATAAGTAAAAA GAACCAATGTGCAGGTTG TTGC TAGCCTACATATTGGTTC TTATCATTTCTCAAC TERM 740 614374 - 614407 + T 76 -7.5 -3.94823 | opp_overlap 614371, overlap 614371 614365 TATAAGTAAAAAGAA CCAATGTGCAGGTTG TTGC TAGCCTACATATTGG TTCTTATCATTTCTC SPD_0588 615389 - 614421 - | transcriptional regulator, putative SPD_0589 615393 - 615662 + | hypothetical protein SPD_0590 615662 - 616042 + | rhodanese-like domain-containing protein SPD_0591 616161 - 616358 + | hypothetical protein TERM 741 616364 - 616395 + T 74 -6.8 -4.40804 | opp_overlap 616365 616372, overlap 616372 TTTTCGGTAAATAAA AGAAAAAAGCTTTA GTTT TAAAGCTTTTTTTG TTTTATCGACTCATC TERM 742 616394 - 616365 - T 90 -8.1 -4.86731 | opp_overlap 616364 616372, overlap 616372 TTTCGGTAAATAAAA GAAAAAAGCTTTA GTTT TAAAGCTTTTTTT GTTTTATCGACTCAT TERM 743 616387 - 616372 - T 93 -6.2 -5.95449 | opp_overlap 616364 616372, overlap 616365 AAATAAAAGAAAAAA GCTTTA GTTT TAAAGC TTTTTTTGTTTTATC TERM 744 616372 - 616387 + T 95 -6.2 -6.14618 | opp_overlap 616372 616365, overlap 616364 AAATAAAAGAAAAAA GCTTTA GTTT TAAAGC TTTTTTTGTTTTATC rsuA-2 617123 - 616398 - | ribosomal small subunit pseudouridine synthase A TERM 745 617653 - 617639 - g 83 -6.4 -5.08824 | opp_overlap 617639 TTCGTATTGAAAAAA GCCTTG GAA CAAGAC CTTGTCCCAATCGTG SPD_0593 617285 - 619126 + | elongation factor Tu family protein SPD_0594 619146 - 619400 + | hypothetical protein TERM 746 619420 - 619405 - f 83 -4.7 -5.57729 | opp_overlap 619405, overlap 619398 AAAGAAGATAAAAAA GAGAG TTTTGG CTCTC TTTTTTGCTAGGAAT TERM 747 619405 - 619420 + F 79 -5.4 -5.14965 | opp_overlap 619405 619398 AAAGAAGATAAAAAA GAGAGT TTTG GCTCTC TTTTTTGCTAGGAAT TERM 748 619729 - 619741 + G 79 -3.3 -5.40072 | TTTTGTTGCATTGTT GCTCA AGG TGTGC TTTTTTTGAAAGAAA SPD_0595 619716 - 620063 + | hypothetical protein TERM 749 620084 - 620111 + F 100 -13.6 -4.86731 | opp_overlap 620084 AGTTTTCTTAGATAA TTCCCCTTGTAA GAAA TTACAGGGGGAA TTTTGTTTACAAGGA TERM 750 620111 - 620084 - f 89 -11.4 -3.48395 | opp_overlap 620084 AGTTTTCTTAGATAA TTCCCCTTGTAA GAAA TTACAGGGGGAA TTTTGTTTACAAGGA SPD_0596 620134 - 622155 + | hypothetical protein TERM 751 622494 - 622484 - g 79 -5.4 -4.87893 | opp_overlap 622484 AAGTTGAAGGAAAAA GAGA AAA TCTC TTTGATGAAACAAGC TERM 752 622715 - 622705 - g 85 -6.8 -5.06103 | AGAATCTTTAAAAAA TCCG AAT CGGA CCATTATTATTGCGA SPD_0597 622157 - 622798 + | ABC transporter, ATP-binding protein TERM 753 622826 - 622846 + F 88 -6.2 -5.65927 | opp_overlap 622834 CAGTTAGAAGAAAGA GTCACAAA CACAC TTTGTGGC TTTTTTATTTCCATA murD 622902 - 624254 + | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase murG 624258 - 625316 + | N-acetylglucosaminyl transferase divIB 625326 - 626516 + | cell division protein DivIB SPD_0601 626647 - 626772 + | hypothetical protein SPD_0602 626784 - 626915 + | hypothetical protein TERM 754 627039 - 627070 + F 84 -6.7 -5.09762 | gap 1 TATTGATTGCGGACT GAGGGACTAGAGTA TGTTT TACT-TAGCCCCTC TTTTATTTATTAAAG SPD_0603 627307 - 628104 + | hypothetical protein TERM 755 628886 - 628863 - g 70 -9 -3.09925 | overlap 628860 AGATATAAATAAGTA CACTTTATCT GATA AGACAAAGTG GCCGACTACACCAGA TERM 756 629423 - 629435 + G 71 -4.9 -4.56978 | GTATAGTGTGTCTTA GTTAT TAT ATAAC TTTATTATTTGGCAA SPD_0604 628447 - 629460 + | HesA/MoeB/ThiF family protein SPD_0606 630496 - 631209 + | hypothetical protein TERM 757 631836 - 631852 + F 70 -4.3 -4.7254 | opp_overlap 631837, overlap 631837 AGGTTAGACGGTGAA AGGGTGG AGA CTACCCA TTTTTCGTGGAACCT TERM 758 631861 - 631884 + F 90 -8.2 -5.18357 | gap 1 CTACCCATTTTTCGT GGAACCTTGCT GTT GGCA-GGTTCC TTTTTTCGTGGCTTC pyrF 631944 - 632645 + | orotidine 5'-phosphate decarboxylase pyrE 632679 - 633311 + | orotate phosphoribosyltransferase TERM 759 633333 - 633348 + F 89 -9 -4.30559 | opp_overlap 633328 633333 633332 633330 633335 AAGATAAAGAGAGAC GAGGCT ACCG AGCCTC TTTTACCATTTTGTT TERM 760 633357 - 633390 + F 87 -12.9 -2.71263 | opp_overlap 633377 GAGCCTCTTTTACCA TTTTGTTTAAAATAT GACA ATATTTTAAACAAAA TAATTGACAACGCTT SPD_0610 633491 - 633895 + | hypothetical protein TERM 761 633933 - 633966 + F 83 -6.2 -5.18726 | gap 1, overlap 633934 AAAGATGGTTGATTG T-GGGTGTAGCAT GAAAAAAGA ATGCTACACCCTA TTTTTATTATAAGGA TERM 762 633934 - 633964 + F 100 -11.3 -4.22377 | overlap 633933 AAGATGGTTGATTGT GGGTGTAGCAT GAAAAAAGA ATGCTACACCC TATTTTTATTATAAG SPD_0611 633991 - 634755 + | hypothetical protein SPD_0612 634755 - 635507 + | hypothetical protein TERM 763 635678 - 635689 + G 80 -4.4 -5.30189 | AAAAGGGCCTAATCT GAGT CAAA ACTC TTTTTTAGTCTTATC SPD_0613 635511 - 636215 + | hypothetical protein SPD_0614 636212 - 636859 + | ABC transporter, ATP-binding protein TERM 764 636937 - 636895 - T 75 -7.3 -4.23758 | gap 1, opp_overlap 636904, overlap 636904 ATGTTATAGGTAAAA TCTTAAAAAGGGATTGGA GCTTAAAA TCCAGTCCCTTT-TAAGA GTTAATGGCCACCTT TERM 765 636929 - 636904 - T 72 -4.7 -4.7416 | opp_overlap 636904, overlap 636895 GTAAAATCTTAAAAA GGGATTGGA GCTTAAAA TCCAGTCCC TTTTAAGAGTTAATG TERM 766 636904 - 636929 + T 75 -6.9 -4.15106 | opp_overlap 636904 636895 GTAAAATCTTAAAAA GGGATTGGA GCTTAAAA TCCAGTCCC TTTTAAGAGTTAATG SPD_0616 638574 - 637816 - | amino acid ABC transporter, ATP-binding protein SPD_0617 639252 - 638575 - | amino acid ABC transporter, permease protein SPD_0618 639892 - 639212 - | amino acid ABC transporter, permease protein TERM 767 639949 - 639961 + H 76 -2.7 -5.4756 | ACTTAAAATCTTCTT TGGAT AAT ATCTA TTTTTTATTGCCGTT SPD_0619 640107 - 640253 + | hypothetical protein lysS 640381 - 641871 + | lysyl-tRNA synthetase TERM 768 641879 - 641900 + F 79 -4.4 -5.26875 | TGAAATAAATTCTTA TCCTCTGG CTCTTA TCAGGGGA TTTTTTGATTCAAAA lctO 642496 - 643632 + | lactate oxidase TERM 769 643645 - 643663 + F 100 -10.3 -5.17744 | opp_overlap 643643 TGATAAAACAGATTG CCTCCAC TGAAT GTGGAGG TTTTTCTTCGTGTAT SPD_0622 644187 - 644855 + | transcriptional regulator, TENA/THI-4 family protein, putative TERM 770 644955 - 644937 - f 78 -10.4 -2.61383 | opp_overlap 644936 644953, overlap 644936 AGTTCTATCCACAAC CTCAAAAC AGT GTTTTGAG CTGACTTCGTCAGTC TERM 771 645205 - 645174 - g 93 -7.4 -5.50723 | opp_overlap 645180 645184, overlap 645175 TTATTAAAAGAAAAA GCACCATTGGTCAT TTGT ATAACCAATGATGT AGTAAAAAATTTCAC TERM 772 645204 - 645175 - g 86 -10.9 -3.88807 | opp_overlap 645180 645184, overlap 645174 TATTAAAAGAAAAAG CACCATTGGTCAT TTGT ATAACCAATGATG TAGTAAAAAATTTCA TERM 773 645838 - 645825 - g 74 -4.5 -4.89393 | opp_overlap 645825, overlap 645826 GAAATGGCAGAAAAA CGTCC AAAT GGACA TCTTCCTGGGACATT thiM 645144 - 645926 + | hydroxyethylthiazole kinase thiE-1 645928 - 646557 + | thiamine-phosphate pyrophosphorylase TERM 774 646894 - 646918 + F 89 -3 -5.79595 | gap 1 ATCTTGTAAGCTGAA CTCTAATT-CG TATC TGTAATTAGAG TTTTTTCTTTTACGA TERM 775 647092 - 647108 + F 74 -2.3 -5.47159 | overlap 647093 647098 CTTGAGTGTCCCACT TTTCTTT AAA AAAGGAG TTTTTTATGTTGAAA SPD_0625 647115 - 647675 + | hypothetical protein SPD_0626 647676 - 649061 + | ABC transporter, ATP-binding protein SPD_0627 649063 - 649713 + | hypothetical protein tenA 649724 - 650416 + | transcriptional activator TenA, TENA/THI-4 family protein thiW 650421 - 650945 + | hypothetical protein SPD_0630 650945 - 651748 + | hydroxyethylthiazole kinase, putative thiE-2 651741 - 652373 + | thiamine-phosphate pyrophosphorylase TERM 776 652541 - 652573 + T 100 -10.7 -5.85737 | opp_overlap 652541, overlap 652530 CGAAGAGTATAAAAA CTCTCTAATTCCC TTAAAGT GGGAACTAGAGAG TTTTTTTCTTAATCT TERM 777 652573 - 652541 - T 100 -12.9 -4.98436 | opp_overlap 652530 652541 CGAAGAGTATAAAAA CTCTCTAATTCCC TTAAAGT GGGAACTAGAGAG TTTTTTTCTTAATCT thiD 653373 - 652582 - | phosphomethylpyrimidine kinase SPD_0633 653739 - 654134 + | transcriptional regulator, putative SPD_0634 654145 - 654516 + | hypothetical protein TERM 778 656083 - 656071 - g 74 -6.3 -4.32201 | CGAATCAATGGAAAA CAAGT TTT ACTTG GAAATGCTAAAATGC SPD_0635 654526 - 656769 + | cation-transporting ATPase, E1-E2 family protein TERM 779 657009 - 656992 - g 71 -6.3 -4.28774 | opp_overlap 656992 TGACTCAAGGGAAAA TTACTGC ATCT GCAGCAA TGCTTAACGTATTGA spxB 656976 - 658751 + | pyruvate oxidase TERM 780 658825 - 658842 + F 83 -7.7 -4.82901 | opp_overlap 658814 658825 658828 AGCAGAACTTTAAAA GATCGGA GCAA TCCGGTC TTTTTATGGAGGAGA SPD_0637 658862 - 659209 + | hypothetical protein TERM 781 659279 - 659296 + T 88 -7.7 -4.96848 | opp_overlap 659279 659282 TATGAACTATTGAAA GATCGGA GCAA TCCGGTC TTTTTATATAAAGAA SPD_0638 659979 - 659326 - | transposase family protein SPD_0639 660214 - 659867 - | hypothetical protein TERM 782 661002 - 661018 + H 89 -6.6 -5.59357 | opp_overlap 661002, overlap 660994 ATAAGATGTAAAAAA GAGTTC AAATG GAACTC TTTTTTTGCTATAAT TERM 783 661018 - 661002 - H 84 -6.6 -5.17054 | opp_overlap 661002 660994 ATAAGATGTAAAAAA GAGTTC AAATG GAACTC TTTTTTTGCTATAAT manA 661064 - 662008 + | mannose-6-phosphate isomerase, class I TERM 784 662045 - 662013 - T 100 -10 -5.28176 | opp_overlap 662017, overlap 662017 GTCATCCATAAAAAA GAAAGGACCTGAGT TCATT ACTCAAGTCCTTTT GATTACATAAATTGG TERM 785 662041 - 662017 - T 100 -10.8 -5.13354 | opp_overlap 662017, overlap 662013 TCCATAAAAAAGAAA GGACCTGAGT TCATT ACTCAAGTCC TTTTGATTACATAAA TERM 786 662017 - 662041 + T 89 -8.6 -4.43477 | opp_overlap 662017 662013 TCCATAAAAAAGAAA GGACCTGAGT TCATT ACTCAAGTCC TTTTGATTACATAAA SPD_0642 663496 - 662111 - | sodium-dependent transporter TERM 787 662569 - 662516 - G 100 -21.2 -4.06786 | overlap 662518 AGGCAAGACGATAAA GACCAAGCTCGGTCCCCCTTCA GACTGGATAT TGAAGGGGGACCGAGCTTGGAA AATGGCTAGACCTGC TERM 788 662567 - 662518 - G 100 -28.2 -3.62291 | overlap 662516 GCAAGACGATAAAGA CCAAGCTCGGTCCCCCTTCA GACTGGATAT TGAAGGGGGACCGAGCTTGG AAAATGGCTAGACCT TERM 789 663432 - 663411 - G 93 -8.1 -5.4593 | opp_overlap 663411 663410 663424 TCAAAATAAGAAAAA GCTACTTGA GTTG TCAAATAGC CTTCTGTTTGATTGA TERM 790 663985 - 663968 - R 73 -4.1 -4.99056 | CAAGACAATCAAAAA TACCACC AAGA AGCGGTA GAGAAATATGGTCAA TERM 791 664348 - 664326 - R 100 -15 -4.37211 | opp_overlap 664326 CAAATGCAGAATAAA TAGGCTAGGA ATT TCCTAGCCTA TTTTTTATTTCAAAT TERM 792 664326 - 664348 + r 100 -15 -5.64421 | opp_overlap 664326 CAAATGCAGAATAAA TAGGCTAGGA ATT TCCTAGCCTA TTTTTTATTTCAAAT SPD_0644 664808 - 664353 - | MutT/nudix family protein SPD_0645 666003 - 664828 - | hypothetical protein TERM 793 666049 - 666027 - R 100 -11.4 -5.67063 | opp_overlap 666030 TGTACCACAAAAAAA CAAGAGATGA TGG TCACCTCTTG TCAAGAATGCAATTA SPD_0646 666907 - 666062 - | hypothetical protein TERM 794 666183 - 666193 + g 71 -4 -4.99435 | ATTCGCTCTGAGAGC TGTT GAC AACA TTTTTCGTTATTGCG TERM 795 666939 - 666953 + H 76 -2.8 -5.48303 | overlap 666921 666920 TGTCAGTTATACATT GACAAA GGT TCTGTC TTTTTTTACAATTAT SPD_0647 667032 - 667589 + | transcriptional regulator, TetR family protein TERM 796 668022 - 668007 - g 76 -4.6 -5.1356 | opp_overlap 668007, overlap 667991 CTTTATCAAGAAAAA GGGACA GAAT TGACCC ATTTACCACTTGAGA SPD_0648 667608 - 668075 + | cytidine and deoxycytidylate deaminase family protein TERM 797 668093 - 668116 + F 82 -5.4 -5.23316 | opp_overlap 668089 668094, overlap 668094 ATTATCAAAAATAAA TGGTTTAGAA AGAT TTTTAAACCG TTTTTTGGTATAATA upp 668143 - 668793 + | uracil phosphoribosyltransferase TERM 798 668833 - 668809 - f 71 -6.6 -4.22475 | gap 1 GATCGAAAAGAAGAA TGACTTGGAAA AGTA TTTCCA-GTCA CGAAAGGAGGTTGGG clpP 668967 - 669557 + | ATP-dependent Clp protease proteolytic subunit TERM 799 669570 - 669589 + F 95 -8.6 -5.59357 | opp_overlap 669569 669570 TAATGATGATAGAAG GCAAACTC GACT GGGTTTGC TTTTTTTGGTATAAT SPD_0651 669636 - 669884 + | hypothetical protein livJ 669986 - 671146 + | branched-chain amino acid ABC transporter, amino acid-binding protein TERM 800 671199 - 671155 - f 100 -10.1 -5.16133 | opp_overlap 671155 671157, overlap 671163 671165 ACCATAATAGAAAAA TGTTGAAATAGGGAATGAGCC TTT GACTCACTCCCTGTTTCGATA TTTAATACTCTTCGA TERM 801 671155 - 671199 + F 95 -12.3 -3.84648 | opp_overlap 671155 671163 671165, overlap 671157 ACCATAATAGAAAAA TGTTGAAATAGGGAATGAGCC TTT GACTCACTCCCTGTTTCGATA TTTAATACTCTTCGA TERM 802 671157 - 671197 + F 93 -12.7 -3.50553 | opp_overlap 671155 671163 671165, overlap 671155 CATAATAGAAAAATG TTGAAATAGGGAATGAGCC TTT GACTCACTCCCTGTTTCGA TATTTAATACTCTTC TERM 803 671191 - 671163 - f 86 -10.3 -3.69455 | opp_overlap 671157 671155, overlap 671155 671165 AGAAAAATGTTGAAA TAGGGAATGAGCC TTT GACTCACTCCCTG TTTCGATATTTAATA TERM 804 671189 - 671165 - f 93 -12.9 -3.41445 | opp_overlap 671157 671155, overlap 671163 671155 AAAAATGTTGAAATA GGGAATGAGCC TTT GACTCACTCCC TGTTTCGATATTTAA TERM 805 671259 - 671275 + F 87 -10.9 -3.48924 | opp_overlap 671256 TTGGATTATATATGT GACTGAC TTC GTCAGTC TTATCTACAACCTCA TERM 806 671306 - 671286 - f 72 -8.3 -3.35996 | overlap 671287 CAGTCTTATCTACAA CCTCAAAGC AGT GCTTTGAGC AACCTGCGGCTAGTT TERM 807 671305 - 671287 - f 84 -11.8 -2.61383 | overlap 671286 AGTCTTATCTACAAC CTCAAAGC AGT GCTTTGAG CAACCTGCGGCTAGT livH 671414 - 672283 + | branched-chain amino acid ABC transporter, permease protein livM 672287 - 673243 + | branched-chain amino acid ABC transporter, permease protein livG 673243 - 674007 + | branched-chain amino acid ABC transporter, ATP-binding protein TERM 808 674355 - 674342 - g 74 -5.3 -4.6635 | AAATCGTGAAGAAAA TCAAG CTAA CTTGA AGAAGGTTTTCTCAC livF 674007 - 674717 + | branched-chain amino acid ABC transporter, ATP-binding protein TERM 809 674720 - 674734 + F 85 -8.6 -4.25283 | opp_overlap 674720 TCTAGGTGGCTAAAA CAATCC AGT GGATTG TTTTAGTCGGCAGAT TERM 810 674734 - 674720 - f 85 -8.6 -4.08767 | opp_overlap 674720 TCTAGGTGGCTAAAA CAATCC AGT GGATTG TTTTAGTCGGCAGAT TERM 811 674822 - 674808 - f 82 -8.6 -4.0371 | TAGGTTGCAGATAAA GATTGC GAA GCAATC ATCAAATCCAGAGGA TERM 812 675001 - 675019 + F 93 -8.9 -4.77759 | opp_overlap 675003 TTACCTTCATTCACA GAGCTCT ATTTC AGAGCTC TTTTTGCTAGCTTAT TERM 813 675738 - 675728 - g 78 -4 -5.27335 | opp_overlap 675728 GCCTTGAAAGAAAAA TTTG AAG CAAA TGGTATTCAAGTGGA SPD_0657 675131 - 675787 + | acetoin utilization protein AcuB, putative TERM 814 675793 - 675808 + F 95 -9 -5.14563 | opp_overlap 675792 AGTCTTGTAAGAAGG GAAGCC CAAA GGCTTC TTTTTTCATGAAAAG TERM 815 676115 - 676099 - g 70 -9.5 -2.56828 | overlap 676098 676096 AAACACTTACAATAC CTTCCAT AAG ATGGAAG AGTTGCAGGATGAAG prfB 676001 - 676990 + | peptide chain release factor 2 ftsE 677008 - 677700 + | cell division ATP-binding protein FtsE ftsX 677693 - 678619 + | cell division ABC transporter, permease protein FtsX TERM 816 678641 - 678658 + F 95 -8.5 -5.14563 | TAGCTGCTTTTATGA GGAGATT GTAA AATCTCC TTTTTTGCTACAAGA TERM 817 678880 - 678853 - f 100 -10.8 -4.18119 | gap 1, opp_overlap 678860, overlap 678854 ATTAAATCATAGAAA GTGCAAACGTTTT CGT AAAACGTTTGC-C TAAATAAAAATAAAG TERM 818 678880 - 678854 - f 83 -11 -3.09787 | opp_overlap 678860, overlap 678853 TTAAATCATAGAAAG TGCAAACGTTTT CGT AAAACGTTTGCC TAAATAAAAATAAAG exp5 678905 - 681085 + | PTS system, IIABC components TERM 819 681093 - 681118 + F 100 -12 -4.17048 | opp_overlap 681090 AATTGTAATATACTT GAGGTTGGAA GCTGTA TTCCAACCTC TTATTTTGGGAGAAA SPD_0662 681137 - 681952 + | hypothetical protein TERM 820 681965 - 681988 + F 77 -6 -4.71426 | opp_overlap 681963 681965 TAATAACTGAAAAGA GGTTGGAACT ATAA AATTCCAGCC TTTTCTTACTAGAGA TERM 821 683271 - 683259 - g 76 -3.4 -5.25803 | AACCGTGAGAAAAAA CAAG ATAAA CTTG ATATCGAAATGATTG SPD_0663 682092 - 683435 + | ATP-dependent RNA helicase, DEAD/DEAH box family protein TERM 822 683444 - 683464 + F 88 -7.6 -5.04601 | opp_overlap 683443 ATTTTAATAGAAATT GTTGGAGT ACTGA GCTCCAAC TTTTTGCTTTATGAG metK 683650 - 684840 + | S-adenosylmethionine synthetase TERM 823 684849 - 684865 + F 95 -8.7 -5.47914 | opp_overlap 684851 AAAATAAGATTTTAA GAGGGGA ACG TCCTCTC TTTTTTATAGTTTTT pyrDa 685393 - 686328 + | dihydroorotate dehydrogenase 1A holA 686362 - 687399 + | DNA polymerase III subunit delta TERM 824 687418 - 687444 + F 100 -10.8 -4.30833 | opp_overlap 687418 TTGTTGAAACTACAA CCCGCGTCAGGA CTA TCTTGTCGTGGG TTTCTTGCTGATTTG TERM 825 688058 - 688043 - g 76 -3.2 -5.1925 | TCAGAAGGTAAAAAA CCAATC TTGG GCTTGG ACGTTTGGGAACATG sodA 687572 - 688177 + | superoxide dismutase, manganese-dependent TERM 826 688189 - 688207 + F 90 -8.2 -5.1925 | ATAATGATAGTTGGA GGGAAGAA TTG TTCTTCTC TTTTTTAGGTTATAA TERM 827 688230 - 688249 + F 93 -7.9 -5.56112 | opp_overlap 688223 GGTTATAAGATTCTG GTCTGAC AAAATC GTCAGAC TTTTTTCATTTTTAT SPD_0668 688334 - 688864 + | hypothetical protein TERM 828 689955 - 689932 - g 71 -6.6 -4.08221 | overlap 689933 TCTAACACAATGAAA CGTGACCGCC AGAA GGCAGTCGCA GAGGTAAATCCGTAA SPD_0669 688885 - 689970 + | hypothetical protein TERM 829 690071 - 690098 + G 87 -4.8 -5.48213 | GAACAATCGGGAACT CCAGGTATTCAG CATC TTGGACGCCTGG TTTTTCTTTTGACTC SPD_0670 690008 - 690439 + | hypothetical protein TERM 830 691914 - 691931 + G 70 -5.5 -4.37886 | GGATCTATCCTTATG GTCTGCC ACGA GCCAGAC TTTTATGAAGGCTGG SPD_0671 690441 - 691982 + | ABC transporter, ATP-binding protein TERM 831 691991 - 692035 + T 70 -4.6 -4.70879 | gap 1, opp_overlap 692001, overlap 691992 692001 AACTTAAGAATGAGA GTAAAAGAAATACAGTA-CCG AATG TGGATACTGTATTTTTTTTGG TTTTTAAGATTTAAA TERM 832 691992 - 692034 + T 72 -8.1 -3.41804 | gap 1, opp_overlap 692001, overlap 691991 692001 ACTTAAGAATGAGAG TAAAAGAAATACAGTA-CCG AATG TGGATACTGTATTTTTTTTG GTTTTTAAGATTTAA TERM 833 692025 - 692001 - T 80 -6.5 -4.75288 | opp_overlap 692001 691992 691991 TGAGAGTAAAAGAAA TACAGTACCGA ATG TGGATACTGTA TTTTTTTTGGTTTTT TERM 834 692001 - 692025 + T 93 -4.4 -6.11019 | gap 1, opp_overlap 692001, overlap 691992 691991 TGAGAGTAAAAGAAA TACAGTA-CCG AATG TGGATACTGTA TTTTTTTTGGTTTTT SPD_0672 692842 - 692039 - | peptidyl-prolyl cis-trans isomerase, cyclophilin-type SPD_0673 693147 - 692926 - | hypothetical protein TERM 835 693145 - 693132 - G 74 -3.8 -5.0538 | TGCCATTGTAAAAAA GTCC ATAGAA GGAC ATGAAAGTGACCAGC TERM 836 693464 - 693489 + H 100 -10.5 -5.77632 | opp_overlap 693464 ATACAGCATTTACAA CACTTCATGGT TCAC ACCATGGGGTG TTTTTTTATGATTTT rpsP 694013 - 694285 + | 30S ribosomal protein S16 SPD_0675 694305 - 694544 + | hypothetical protein TERM 837 694550 - 694567 + F 100 -9.1 -5.37043 | opp_overlap 694549 CGAAAAATAAGAAGG GCGGGAC GGAT GTCTCGC TTTTTTGTGTGGAAT SPD_0676 695121 - 695549 + | hypothetical protein SPD_0677 695550 - 695909 + | hypothetical protein TERM 838 696158 - 696144 - g 71 -7.2 -3.87551 | overlap 696157 ATTATTAAATTCAAA GATATG TAC CATATC AATACTATCGAAAAG rimM 695940 - 696458 + | 16S rRNA-processing protein TERM 839 696599 - 696576 - g 76 -7.4 -4.19879 | AGAAAATGCTGAAAA GGCCCGTCAT GTAG ATGATGAGCC CTACGGAGGCGGTCA trmD 696448 - 697167 + | tRNA (guanine-N(1)-)-methyltransferase SPD_0680 697179 - 697517 + | hypothetical protein TERM 840 697525 - 697553 + T 100 -12.5 -4.24887 | opp_overlap 697525 TTCGCTAAGAAAAAA GAGTGGGATGAAG CAA CTACATCTCACTC TTTCTTAAATCTATT TERM 841 697553 - 697525 - T 100 -10.3 -5.4505 | opp_overlap 697525 TTCGCTAAGAAAAAA GAGTGGGATGAAG CAA CTACATCTCACTC TTTCTTAAATCTATT SPD_0681 697868 - 697548 - | hypothetical protein TERM 842 697936 - 697906 - H 71 -5.6 -4.61147 | overlap 697908 CAATATTATATAAAA TTTTCCTAAAATCT ACA AGATTTTACGAATA AACTAATGAAACTAA SPD_0683 697966 - 698181 + | hypothetical protein SPD_0682 698324 - 698178 - | hypothetical protein TERM 843 698239 - 698251 + g 70 -7.7 -3.72695 | CCGTATGTATGGTTA CTGAC TTC GTCAG TTTCATCCACAACCT TERM 844 698283 - 698265 - G 72 -10.4 -2.61383 | overlap 698264 AGTTTCATCCACAAC CTCAAAAC AGT GTTTTGAG CAGCCTGCGGCTAGC TERM 845 698352 - 698380 + r 89 -7.5 -5.30155 | opp_overlap 698352 TTCAAAATAAAAAAA GGATATTGAGTCA TGA TAACTCGGTATCC TTTTTTAGTTAGTAA TERM 846 698380 - 698352 - R 93 -5.3 -6.09196 | opp_overlap 698352 TTCAAAATAAAAAAA GGATATTGAGTCA TGA TAACTCGGTATCC TTTTTTAGTTAGTAA SPD_0684 698921 - 698385 - | biotin synthase (BioY family protein), putative TERM 847 698625 - 698594 - G 70 -3 -5.06414 | GGTTTGCAAGAAAAA TCTTAACAACACCA CTCT TGCTGTTGGTTAGA GAGGAAGTAAGTCCA TERM 848 699081 - 699106 + r 75 -4.7 -4.94058 | opp_overlap 699081, overlap 699076 AAAATCATTAAAAAA GAAGCAGACAT ATTT ATATCAGCTTC TTTTGTTTCGATTAA TERM 849 699106 - 699081 - R 89 -6.9 -5.25656 | opp_overlap 699076 699081 AAAATCATTAAAAAA GAAGCAGACAT ATTT ATATCAGCTTC TTTTGTTTCGATTAA gor 700464 - 699118 - | glutathione reductase TERM 850 700855 - 700870 + G 71 -7.6 -3.9461 | opp_overlap 700855 CAGACTGCTCTAAAA GATGAG CCTA CTCATC TTGTTGTTGCCAAGG TERM 851 700870 - 700855 - g 73 -7.6 -4.09243 | opp_overlap 700855 CAGACTGCTCTAAAA GATGAG CCTA CTCATC TTGTTGTTGCCAAGG SPD_0686 700729 - 701928 + | hypothetical protein TERM 852 702509 - 702498 - g 76 -4.4 -5.05712 | ATAAAGAAGGAAAAA CCAT TATC ATGG TAACGCATGAGCCTG SPD_0687 701912 - 702613 + | ABC transporter ATP-binding protein SPD_0688 702615 - 703874 + | hypothetical protein TERM 853 703881 - 703904 + F 100 -10.4 -5.01546 | opp_overlap 703881 703884 TATGAATGAGATCAA CAAGATGGAC ACTC GTCTATCTTG TTTTTGTATGGATTT TERM 854 703904 - 703881 - f 70 -8.2 -3.33361 | opp_overlap 703881, overlap 703884 TATGAATGAGATCAA CAAGATGGAC ACTC GTCTATCTTG TTTTTGTATGGATTT metG 703998 - 705995 + | methionyl-tRNA synthetase TERM 855 706003 - 706026 + F 100 -8.2 -6.02919 | opp_overlap 706003 706005 TTGGGTAAAAGTAGA CAGGACTAGT TCAG GCTAGTTCTG TTTTTTTATTTATAC TERM 856 706086 - 706104 + G 72 -10.4 -2.61383 | overlap 706085 GCTAGCCGCAGGTTG CTCAAAAC ACT GTTTTGAG GTTGTAGATAGAACT TERM 857 706133 - 706115 - g 71 -9.6 -2.87931 | opp_overlap 706130 706131, overlap 706118 706130 TTGAGGTTGTAGATA GAACTGAC GAA GTCAGCTC AAAACACTGTTTTGA TERM 858 706131 - 706149 + G 72 -10.4 -2.61383 | opp_overlap 706115 706130, overlap 706130 AACTGACGAAGTCAG CTCAAAAC ACT GTTTTGAG GTTGTAGATGAAACT TERM 859 706175 - 706163 - g 73 -7.7 -3.83205 | AGGTTGTAGATGAAA CTGAC GAA GTCAG TAACCATACATACGG SPD_0690 706045 - 706236 + | hypothetical protein SPD_0691 706326 - 706646 + | hypothetical protein TERM 860 707467 - 707494 + G 77 -10 -3.40403 | opp_overlap 707474, overlap 707474 GGAGTGAAGTACAGT CAAAAAGCCGTT GCAA AGCGGTTTTTTG TTATAATGAAGGGAA TERM 861 707474 - 707487 + G 89 -4.5 -5.58179 | opp_overlap 707474, overlap 707467 AGTACAGTCAAAAAG CCGTT GCAA AGCGG TTTTTTGTTATAATG SPD_0692 706650 - 707525 + | hypothetical protein SPD_0693 707540 - 708466 + | oxidoreductase, aldo/keto reductase family protein TERM 862 708502 - 708515 + F 91 -4.5 -5.89921 | opp_overlap 708502 ATCACAGTCAAAAAG CCGTT TTAA AGCGG TTTTTTTGTTATAAT SPD_0694 708545 - 708802 + | hypothetical protein fabG 708795 - 709493 + | 3-ketoacyl-(acyl-carrier-protein) reductase SPD_0696 709504 - 709983 + | MutT/nudix family protein TERM 863 710408 - 710418 + G 81 -5.4 -5.07652 | CAGGGGGATTTTGAG TCCT ATC AGGA TTTTGTTTTAAAAGG SPD_0697 709991 - 710719 + | acetyltransferase, GNAT family protein SPD_0698 710761 - 711630 + | hypothetical protein SPD_0699 711605 - 712045 + | hypothetical protein pepN 712168 - 714714 + | aminopeptidase N TERM 864 714738 - 714771 + F 84 -4 -5.75342 | gap 1 AAAATAAAAAGAAAA CTCAGCTATCT-CAT GTAAA ATGCAGAGAGTTGAG TTTTTTTTAAGGCAA TERM 865 714861 - 714879 + G 77 -6.1 -4.61527 | GGATGACCTAGGTCT GTCAAAT TCAGT ATTTGAC TTTTTAGACGATTTT ciaR 714757 - 715497 + | DNA-binding response regulator CiaR ciaH 715487 - 716821 + | sensor histidine kinase CiaH TERM 866 716852 - 716819 - Tf 91 -5.3 -5.93252 | opp_overlap 716825, overlap 716825 TCTAAAAAGAAAAAA TAAAAATATCGCTCC AATT GGGGCGATATTTTGG ATTTATCTTCTACGT TERM 867 716825 - 716846 + TF 100 -10.9 -4.42081 | opp_overlap 716819 716825 AAGAAAAAATAAAAA TATCGCTCC AATT GGGGCGATA TTTTGGATTTATCTT TERM 868 716846 - 716825 - Tf 100 -8.7 -5.84011 | opp_overlap 716825, overlap 716819 AAGAAAAAATAAAAA TATCGCTCC AATT GGGGCGATA TTTTGGATTTATCTT SPD_0703 717142 - 716855 - | hypothetical protein SPD_0704 717141 - 718211 + | hypothetical protein TERM 869 718225 - 718260 + FH 88 -7.8 -4.97461 | gap 1 AAAATACATGATTCG TTGAGAGAAGGAA-GAT GCA AACATTTCTTCTCTCAA TTTTTCGTATTTCTT TERM 870 718374 - 718387 + FH 84 -3.7 -5.59357 | ATCCTATGTTTGCAG GTGCC AAAT GGCCC TTTTTTTGGTATAAT TERM 871 718430 - 718418 - g 77 -6.3 -4.48987 | opp_overlap 718417 718418 TTTTTATAATGAAAA CGATT GGT AATCG CTATGTTGTGGTGGA SPD_0705 718411 - 720861 + | bifunctional ATP-dependent DNA helicase/DNA polymerase III subunit epsilon TERM 872 721330 - 721341 + G 73 -2.2 -5.28166 | GAATGGAGACGCACG GTTC CGCT GGAC TTTTTGTTAATTTTC SPD_0706 720898 - 722121 + | rod shape-determining protein RodA, putative SPD_0707 722132 - 722686 + | 4-methyl-5(b-hydroxyethyl)-thiazole monophosphate biosynthesis protein, putative TERM 873 722689 - 722705 + F 84 -5.8 -5.36441 | opp_overlap 722689 722684 TAAAAATCAGTAAAA CGGGAG TTATT CTCTCG TTTTTTATGTGGAAA SPD_0708 722771 - 723334 + | hydrolase, haloacid dehalogenase-like family protein TERM 874 723637 - 723626 - g 81 -5.8 -5.17353 | opp_overlap 723625 ATATTCAGGAAAAAA CAGG TCGT CCTG CTGTTGAGACCGTCT gyrB 723349 - 725295 + | DNA gyrase subunit B ezrA 725377 - 727104 + | septation ring formation regulator EzrA TERM 875 727152 - 727110 - f 76 -6.6 -4.63218 | opp_overlap 727110 TCGTTTTTAATAAAA GAAAAAGATTTTATTGTG TGAGGAG CAGAATCAAATCTTTTTC TATAGTTGTGGGGAG TERM 876 727472 - 727431 - f 100 -11.9 -4.67011 | gap 1, opp_overlap 727431 AAGTCTATTGAAAAA TCTCCAGACTAGAGAACT CACGGAT AGTTC-CTAATCTGGAGA TTTCTTATTTGCACT TERM 877 727431 - 727472 + F 100 -9.7 -4.57581 | gap 1, opp_overlap 727431 AAGTCTATTGAAAAA TCTCCAGACTAGAGAACT CACGGAT AGTTC-CTAATCTGGAGA TTTCTTATTTGCACT SPD_0711 727898 - 728251 + | hypothetical protein SPD_0712 728283 - 728792 + | transposase family protein TERM 878 728835 - 728802 - T 90 -8.3 -4.93898 | opp_overlap 728806, overlap 728806 AGATGAGTATAAAAA GAAAGTCCTCATTTC AATA GAAATCACGACTTTC TGATAGATTTATTTT SPD_0714 729725 - 729426 - | hypothetical protein SPD_0715 730312 - 729890 - | MutT/nudix family protein TERM 879 730226 - 730245 + g 72 -3.6 -5.05606 | opp_overlap 730218 730215 730214 730240, overlap 730214 730228 GAACCAAGCACCATT TGGTTCTT GAAC AAGAACAA TTTGTTTTTGTTCAG TERM 880 730475 - 730453 - g 72 -3.4 -5.0133 | GATTTTCGTAAAAAA GTTCTCTC TTATTGT GAGCGAAC AGGTAGTATAACAGA SPD_0716 730405 - 730752 + | IS630-Spn1, transposase Orf1 TERM 881 731001 - 731023 + T 71 -6.4 -4.1891 | CGATGACGAGCGACT TTTTTGAAGC TTA GTTTCAGAAA TTTCTCTTACCAACA TERM 882 731244 - 731197 - T 100 -15.9 -4.8048 | opp_overlap 731197 731199 731200, overlap 731200 GGCTCATATCAAAAA GCACCTCATAAAAGGTATTAC CAAGTT GCAATACCTTTTATGAGGCTC TTTTGTCTTGTTCTT TERM 883 731197 - 731244 + T 100 -11.5 -4.83518 | opp_overlap 731197 731200, overlap 731199 731200 GGCTCATATCAAAAA GCACCTCATAAAAGGTATTAC CAAGTT GCAATACCTTTTATGAGGCTC TTTTGTCTTGTTCTT TERM 884 731199 - 731242 + T 100 -12.7 -4.00463 | opp_overlap 731197 731200, overlap 731197 731200 CTCATATCAAAAAGC ACCTCATAAAAGGTATTAC CAAGTT GCAATACCTTTTATGAGGC TCTTTTGTCTTGTTC TERM 885 731241 - 731200 - T 100 -18.4 -3.30658 | opp_overlap 731199 731197 731200, overlap 731197 TCATATCAAAAAGCA CCTCATAAAAGGTATTAC CAAGTT GCAATACCTTTTATGAGG CTCTTTTGTCTTGTT TERM 886 731200 - 731241 + T 100 -16.2 -2.98651 | opp_overlap 731200 731197, overlap 731199 731197 TCATATCAAAAAGCA CCTCATAAAAGGTATTAC CAAGTT GCAATACCTTTTATGAGG CTCTTTTGTCTTGTT TERM 887 731463 - 731436 - T 84 -5.7 -5.52986 | opp_overlap 731461 ATTTTAGTAAAAAAA GAAGCAGAAAA ATTTCA TTTTCTACTCC TTTTCTATAGGATTT TERM 888 731461 - 731475 + T 72 -2.8 -5.21459 | opp_overlap 731436 AATTTCATTTTCTAC TCCTTT TCT ATAGGA TTTATTTTTCTTTTT clpE 733735 - 731477 - | ATP-dependent Clp protease ATP-binding subunit ClpE TERM 889 732514 - 732524 + g 79 -3.2 -5.49568 | TGATAGGAGTATCCT GGTC TGT GATC TTTTTCTTTTGCATT TERM 890 733646 - 733659 + g 83 -5.3 -5.18409 | AATCTTATAGCAGTT TTGAC AGAG GTCAA TTTGTTTTTGTTTTC TERM 891 733922 - 733900 - R 93 -7.8 -5.67063 | opp_overlap 733900 TGGACTATAAAAAAA TCCTATTTGT GAG ACAAAAAGGA TTTTACTTAGACATG TERM 892 733900 - 733922 + r 81 -7.8 -4.41494 | opp_overlap 733900 TGGACTATAAAAAAA TCCTATTTGT GAG ACAAAAAGGA TTTTACTTAGACATG TERM 893 733934 - 733956 + r 81 -7.6 -4.30014 | opp_overlap 733936, overlap 733937 AGGATTTTACTTAGA CATGCAGGGA CAA TCCCAGCTTG TTTTAGATTAGTAGA TERM 894 733937 - 733953 + r 78 -7.9 -4.26461 | opp_overlap 733936, overlap 733934 ATTTTACTTAGACAT GCAGGGA CAA TCCCAGC TTGTTTTAGATTAGT SPD_0718 734194 - 733964 - | hypothetical protein TERM 895 734337 - 734320 - H 70 -2.1 -5.28826 | opp_overlap 734313, overlap 734321 AAATTGGATAAAAAA TTTAAAT TTTA ATTCAAA ACATGTTATAATCAT SPD_0719 734384 - 735067 + | amino acid ABC transporter, permease protein SPD_0720 735067 - 735801 + | amino acid ABC transporter, ATP-binding protein folD 735934 - 736812 + | methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase TERM 896 736903 - 736918 + F 74 -3.2 -5.25699 | TATAAGATTACAAAA GGAGGT CTGC GTCTCC TTTTTATTGTATAAT SPD_0722 736954 - 737826 + | YjeF-like protein rpiA 738108 - 738791 + | ribose-5-phosphate isomerase A TERM 897 739725 - 739739 + G 77 -10 -3.38088 | CCATCGTCGTAATGC TCACGG TTA CCGTGA TTGCTTGCATGAGTT deoB 738805 - 740016 + | phosphopentomutase SPD_0726 740576 - 741385 + | purine nucleoside phosphorylase TERM 898 741935 - 741919 - g 90 -10.9 -4.208 | overlap 741932 CTCCAAAACTAGAAA CTCCTCT TAG AGAGGAG CCAAGACTAGCTCCT SPD_0727 741861 - 742592 + | hypothetical protein SPD_0728 742638 - 742841 + | hypothetical protein SPD_0729 742866 - 743378 + | hemolysin-related protein TERM 899 743524 - 743544 + F 72 -8.3 -3.35996 | overlap 743525 AACTAGCCGCAGGTT GCTCAAAGC ACT GCTTTGAGG TTGTAGATAAGACTG TERM 900 743525 - 743543 + F 84 -11.8 -2.61383 | overlap 743524 ACTAGCCGCAGGTTG CTCAAAGC ACT GCTTTGAG GTTGTAGATAAGACT TERM 901 743571 - 743555 - f 87 -10.9 -3.48924 | opp_overlap 743552 TGAGGTTGTAGATAA GACTGAC GAA GTCAGTC ACATATATAATCCAA TERM 902 744482 - 744492 + G 73 -5.4 -4.52047 | TGGTATGACTACTCA CGTT GGG AACG TTTTGTCATCTGATG deoD 744036 - 744746 + | purine nucleoside phosphorylase SPD_0731 745293 - 744769 - | topology modulation protein TERM 903 745341 - 745326 - R 80 -2.5 -5.71712 | TTGGAGACAAAAAAA CAGCC TCTATG GACTG TTTCTTATTTAGCAA rpsT 745582 - 745346 - | 30S ribosomal protein S20 TERM 904 745473 - 745483 + g 70 -5.4 -4.38712 | TCTTCAGATGGGTTT GCTT CGA AAGC TTTTATAGCAGTACG coaA 746570 - 745650 - | pantothenate kinase SPD_0734 746768 - 747208 + | hypothetical protein TERM 905 747303 - 747355 + F 70 -4.3 -4.81863 | overlap 747304 ATTATTTATAAGTGT TGAAAGAGATTGAAGAAAATGGCTT CGT GACTCGCTTTCTTCGGTCTTTTTCG TTTTATTATCAATTT TERM 906 747536 - 747558 + G 83 -12.2 -3.18507 | opp_overlap 747536 TTTTTAGCAAGAAAA TAGTTGACTT TGG AAGTCAACTA TTGCTCAAGTGTCTT TERM 907 747558 - 747536 - g 100 -12.2 -4.71426 | opp_overlap 747536 TTTTTAGCAAGAAAA TAGTTGACTT TGG AAGTCAACTA TTGCTCAAGTGTCTT SPD_0735 747415 - 748005 + | methyltransferase small subunit TERM 908 748089 - 748105 + G 75 -9.5 -3.35934 | GTAGAAGGCTATGTG TCAGGAA CTG TTCCTGA TTATCAGATGTCTGC pdp 748002 - 749279 + | pyrimidine-nucleoside phosphorylase deoC 749297 - 749959 + | deoxyribose-phosphate aldolase TERM 909 750286 - 750276 - g 70 -5.4 -4.45168 | overlap 750277 GTCGCAAAAGATAAA TCGA CGG TCGA GATGACGGTCGGGGA cdd-1 749946 - 750335 + | cytidine deaminase SPD_0739 750425 - 751477 + | membrane lipoprotein TmpC precursor TERM 910 751502 - 751516 + F 100 -12.8 -5.055 | opp_overlap 751502 GTCATTTCTTAGGAA GCGGCC AAG GGCCGC TTTTTTAAGAGTTGA TERM 911 751516 - 751502 - f 91 -12.8 -3.14931 | opp_overlap 751502 GTCATTTCTTAGGAA GCGGCC AAG GGCCGC TTTTTTAAGAGTTGA TERM 912 752864 - 752854 - g 85 -5.4 -5.24551 | GGAAATCAACAAAAA GCAA TTA TTGC TCGTGAAATTGATCG SPD_0740 751621 - 753156 + | sugar ABC transporter, ATP-binding protein TERM 913 753360 - 753372 + G 70 -5.5 -4.44046 | TTGGTTTTGCGGTTG CCAGT CGA GCTGG TTTCTTTAACGTCGG SPD_0741 753149 - 754207 + | sugar ABC transporter, permease protein, putative SPD_0742 754210 - 755166 + | sugar ABC transporter, permease protein, putative TERM 914 755202 - 755242 + T 100 -12.8 -5.19328 | opp_overlap 755181 755199, overlap 755204 CCAATGACTGAACTG CCCCCCAAAAGTTAGA CAGAAAAAA TCTAACTTTTGGGGTG TTTTTATTATGAAAT TERM 915 755204 - 755240 + T 100 -14 -4.22377 | opp_overlap 755199, overlap 755202 AATGACTGAACTGCC CCCCAAAAGTTAGA CAGAAAAAA TCTAACTTTTGGGG TGTTTTTATTATGAA TERM 916 756589 - 756557 - T 100 -10 -4.69549 | opp_overlap 756557 AAGGTAAAACTAAAA GGACTTAGCCCTGT GCAAT ACAGAACTAAATCC TTTGGATAAATTATT SPD_0745 757282 - 756641 - | putative glycerol-3-phosphate acyltransferase PlsY TERM 917 757329 - 757315 - H 100 -10 -4.88405 | overlap 757318 AATTGGGAAAGAAAA GCAGAG AAT CTCTGC TGAAATTGTCACATC TERM 918 757952 - 757926 - g 89 -10.2 -4.19953 | CACTCAAGTCTAAAA CAGGCACCAAAG TTA CTTTTATGCCTG ACGCGACTATCTTTT parE 757418 - 759361 + | DNA topoisomerase IV subunit B SPD_0747 759482 - 759607 + | hypothetical protein TERM 919 761107 - 761095 - g 70 -7.7 -3.71848 | opp_overlap 761104 GTCTTGCAGGAAGAA GAAGC AGA GCTTC GTGAGAAGATTGCTA parC 759772 - 762252 + | DNA topoisomerase IV subunit A ilvE 762382 - 763404 + | branched-chain amino acid aminotransferase TERM 920 764124 - 764114 - g 93 -5.4 -5.61881 | TGGCAAAAAGAAAAA TTGG AAT CCAA TAGCAAATACCAAAA SPD_0750 763460 - 764164 + | hypothetical protein SPD_0751 764229 - 764918 + | hypothetical protein TERM 921 765021 - 765009 - g 71 -4.1 -4.84918 | overlap 765013 GTTATAAAGATAAAA CAAAC CCA GTTCG ACTTGGGACATCTGC TERM 922 765027 - 765013 - g 71 -4.2 -4.91778 | overlap 765009 TAAAGATAAAACAAA CCCAGT TCG ACTTGG GACATCTGCATTTTG SPD_0752 764915 - 765838 + | hypothetical protein pcp 765853 - 766497 + | pyrrolidone-carboxylate peptidase TERM 923 766604 - 766577 - f 100 -12.2 -4.52589 | opp_overlap 766577 GTTGTTTACATAAAA CTCTATATCAGA GAAG CCTGATATAGAG TTTTTTCTTGCTAGT TERM 924 766577 - 766604 + F 100 -11.5 -5.52023 | opp_overlap 766577 GTTGTTTACATAAAA CTCTATATCAG AGAAGC CTGATATAGAG TTTTTTCTTGCTAGT SPD_0754 766665 - 766895 + | hypothetical protein TERM 925 768370 - 768360 - g 76 -2.4 -5.51353 | CAAAAAGAAGAAAAA CGTG CTG CTCG TCCACGTCGTCCAAG rpsA 767268 - 768470 + | 30S ribosomal protein S1 TERM 926 768492 - 768514 + F 100 -10 -4.92363 | opp_overlap 768487 768492, overlap 768487 TGAAAATTCACAAAA TCCTTTGTTT ACT AAACAAGGGA TTTTTCTGGCTCTTT TERM 927 768514 - 768492 - f 82 -7.8 -4.54477 | opp_overlap 768487 768492, overlap 768487 TGAAAATTCACAAAA TCCTTTGTTT ACT AAACAAGGGA TTTTTCTGGCTCTTT TERM 928 768615 - 768637 + F 74 -3.4 -5.27779 | opp_overlap 768619, overlap 768619 GTCAGCTAAGCTCGA TAAAGGACAA AAT TCGTCCTTTC TTTTTTGATGTTCAG TERM 929 768619 - 768633 + F 76 -4.2 -5.10526 | opp_overlap 768619, overlap 768615 GCTAAGCTCGATAAA GGACAA AAT TCGTCC TTTCTTTTTTGATGT TERM 930 769005 - 769024 + F 72 -9.4 -2.64981 | opp_overlap 769003 CATGCGAAAAGTAGG GCGATAAA AACG TTTATCGC TGAGTTTACGGCTAT TERM 931 769199 - 769213 + F 77 -8.6 -3.57263 | opp_overlap 769199 CATTCGGGAGTGAAA CAGTCT GGG AGACTG TTTCAGCCTGAGCCT TERM 932 769213 - 769199 - f 77 -8.6 -3.6502 | opp_overlap 769199 CATTCGGGAGTGAAA CAGTCT GGG AGACTG TTTCAGCCTGAGCCT TERM 933 770058 - 770005 - f 100 -11.4 -4.96848 | gap 1, overlap 770007 TTTTCTACACAAAAA TAGGCTCCATAATATCTATAA-GGG ATTTA CCCACTACAAATATTATAGAGCCCA AAATCCTTTGTTTAC TERM 934 770056 - 770007 - f 100 -11.8 -4.11141 | gap 1, overlap 770005 TTCTACACAAAAATA GGCTCCATAATATCTATAA-GGG ATTTA CCCACTACAAATATTATAGAGCC CAAAATCCTTTGTTT TERM 935 770084 - 770062 - f 78 -7.8 -4.18401 | opp_overlap 770062 770078 TTATAGAGCCCAAAA TCCTTTGTTT ACT AAACAAGGGA TTTTTCTTTTGTCTC TERM 936 770062 - 770084 + F 100 -10 -5.58522 | opp_overlap 770062, overlap 770078 TTATAGAGCCCAAAA TCCTTTGTTT ACT AAACAAGGGA TTTTTCTTTTGTCTC SPD_0759 770126 - 770623 + | hypothetical protein dnaX 770623 - 772278 + | DNA polymerase III subunits gamma and tau TERM 937 772384 - 772404 + G 76 -7.5 -4.14013 | opp_overlap 772372, overlap 772402 GAAGCCTGGATGACT GGCCGCTAT ATT ATGGCAGCC TTTTGGGCAATTTTA SPD_0761 772306 - 772500 + | hypothetical protein TERM 938 772526 - 772536 + F 100 -6.8 -6.17268 | opp_overlap 772521 772526 CCAGACAAAATCAAA GCCT TTT AGGC TTTTTTTTGTTATAC TERM 939 772536 - 772526 - f 74 -6.8 -4.30161 | opp_overlap 772526, overlap 772521 CCAGACAAAATCAAA GCCT TTT AGGC TTTTTTTTGTTATAC sufC 772650 - 773420 + | FeS assembly ATPase SufC sufD 773448 - 774710 + | hypothetical protein TERM 940 775345 - 775365 + G 83 -7.5 -4.7416 | CATATGAAGATTGAT GTCCAGGAC TTG GATCTGGAC TTTTTCGCCTTTTCG sufS 774721 - 775947 + | cysteine desulfurases, SufS subfamily protein SPD_0765 775934 - 776374 + | SUF system FeS assembly protein, NifU family protein TERM 941 776396 - 776369 - f 70 -2.2 -5.28166 | gap 1, opp_overlap 776372 776375, overlap 776372 776375 GAAAATCAAGAAAAA CAGTAAGACAA GTTTCTT TTGTCTTA-TG AATTATTAGAAATGA sufB 776428 - 777840 + | FeS assembly protein SufB TERM 942 777910 - 777922 + T 73 -7.7 -3.83205 | TCGTATGTATGGTTA CTGAC TTC GTCAG TTTCATCTACAACCT TERM 943 777954 - 777936 - T 78 -10.4 -2.61383 | overlap 777935 AGTTTCATCTACAAC CTCAAAAC AGT GTTTTGAG CAACCTGCGGCTAGC TERM 944 778006 - 778043 + T 84 -11.7 -3.02946 | gap 1, opp_overlap 778016, overlap 778016 TTGAAGATGAACTTG TATCAAAAAATCGCGGTT TAA AATCGCGATTTTTT-ATA ATTTCTCGTTAACAA TERM 945 778016 - 778034 + T 100 -9.6 -5.43621 | opp_overlap 778016, overlap 778006 ACTTGTATCAAAAAA TCGCGGTT TAA AATCGCGA TTTTTTATAATTTCT TERM 946 778034 - 778016 - T 88 -7.4 -5.14965 | opp_overlap 778016 778006 ACTTGTATCAAAAAA TCGCGGTT TAA AATCGCGA TTTTTTATAATTTCT dacC 779280 - 778039 - | D-alanyl-D-alanine carboxypeptidase TERM 947 778953 - 778935 - G 81 -11.8 -2.71268 | opp_overlap 778937, overlap 778932 778937 TGGCACTAGATACCA GAGTTGCT TCA AGCAACTC TTCGACAGTATAATT TERM 948 779144 - 779156 + g 71 -6.3 -4.15543 | GGTTGCGTTGCATCC TTCTC ATA GAGAA TTTTACCAGTATTTG TERM 949 779685 - 779710 + G 79 -8.5 -3.9712 | GATTAATCAGTTATC TAGTTTGATTA TATC TAGTCAAACTA TTTATAGTCGAGTAC TERM 950 779987 - 780003 + G 73 -8.7 -3.64283 | TTCTAAAGAGGGATC GCTTGCA TAT TGCAGGC TTATTAAAGAATTTA SPD_0768 779383 - 780492 + | hypothetical protein TERM 951 780496 - 780510 + F 82 -5.7 -5.33405 | opp_overlap 780496 780495 TTAGCTAAGTAAAAG TCAGG AGAAC CCTGA TTTTTCTTTACTGGA TERM 952 780624 - 780658 + F 72 -5.9 -4.34947 | gap 2, opp_overlap 780624 TAAAAATCGAAAAAA CCAGTGGAA-TT-CCGT GTC AGGGTAAGTTCCACTGG TTTTCATAGTCTATT TERM 953 780658 - 780624 - f 84 -5.9 -5.30575 | gap 2, opp_overlap 780624 TAAAAATCGAAAAAA CCAGTGGAA-TT-CCGT GTC AGGGTAAGTTCCACTGG TTTTCATAGTCTATT TERM 954 781519 - 781534 + F 93 -4.7 -5.98675 | opp_overlap 781519 CATTCCTTGGTAAAA CGTTG TTAAAT CAACG TTTTTTATTTTTATC TERM 955 781647 - 781626 - f 93 -7.3 -5.43487 | AAAGGATAGAAAAAA GGATACAAC ATTT GTCGCATCC TAAAAATAATCTTTT lacR1 781917 - 782657 + | lactose phosphotransferase system repressor TERM 956 782994 - 782955 - g 70 -5.8 -4.46976 | gap 1, overlap 782959 ACCAAGAAACAGAAA TC-AACGGAACGGGTCCAA CTG TTGAACCGGTTCAGCTAGA AGAATTGAAAGCTAT TERM 957 782989 - 782959 - g 76 -9 -3.73525 | overlap 782955 AGAAACAGAAATCAA CGGAACGGGTCCAA CTG TTGAACCGGTTCAG CTAGAAGAATTGAAA TERM 958 783100 - 783125 + G 72 -10.5 -2.72036 | gap 1, overlap 783098 TAAGGATTTGATTTC CTTGACGCGCCA GAC TGGTGCG-CAAG TGGTCTGTGACTTTG SPD_0772 782654 - 783565 + | 1-phosphofructokinase, putative TERM 959 783789 - 783771 - g 72 -4.5 -4.8048 | opp_overlap 783776 GCCTCACAGCAAAAA CGCTGCT GTCAA AGAAGCG ACAGTTCTATTTGCT SPD_0773 783562 - 785514 + | PTS system, fructose specific IIABC components TERM 960 785533 - 785554 + F 77 -5.1 -5.0916 | opp_overlap 785528 785533 785536 ATAGAAAAATGAAAA GATTGGACC GTTT GGTGCAGTC TTTTTCTCTTCCCGA TERM 961 785640 - 785628 - g 79 -9.1 -3.91959 | ATACAAGTACAACAA GACGG AGA CCGTC TAAAGCAGAACTGGA SPD_0774 785600 - 787903 + | SpoE family protein TERM 962 787938 - 787909 - T 100 -7.9 -5.97979 | opp_overlap 787909 ACAACAATAAAAAAA TAGCTTCTTTCCA AGTT TGGAGGGAAGCTA TTTTTCTGGCTATTG TERM 963 787909 - 787938 + T 100 -12.3 -4.91459 | opp_overlap 787909 ACAACAATAAAAAAA TAGCTTCTTTCCA AGTT TGGAGGGAAGCTA TTTTTCTGGCTATTG SPD_0775 788481 - 787948 - | hypothetical protein TERM 964 788449 - 788438 - G 76 -2.2 -5.51165 | overlap 788408 AAAATCTTAAAAAAA GAGA AATT TCCC TTTCTTGTCGCAAGC SPD_0776 788514 - 789656 + | aminotransferase, class V thiI 789665 - 790879 + | thiamine biosynthesis protein ThiI TERM 965 790920 - 790955 + F 100 -7.1 -6.23317 | opp_overlap 790920 AAATCAGTAAAAAAA GTTAGTTTTTTCTCT AAAAAC AGGTAAAAAACTAAC TTTTTTTATTTTTAT TERM 966 790955 - 790920 - f 86 -5.6 -5.5943 | opp_overlap 790920 AAATCAGTAAAAAAA GTTAGTTTTTTCTCTA AAAA CAGGTAAAAAACTAAC TTTTTTTATTTTTAT SPD_0778 791014 - 791838 + | hypothetical protein SPD_0779 791860 - 792195 + | hypothetical protein SPD_0780 792195 - 792599 + | hypothetical protein SPD_0781 792612 - 793778 + | hypothetical protein TERM 967 793787 - 793814 + F 89 -7.1 -5.23292 | opp_overlap 793785 793782 AGAATAAGAACTATC GGATTAAGGAA ATTAAC TCCCTTAATCC TTTTGTTTTGTCTGA TERM 968 794078 - 794098 + F 79 -9.1 -3.35996 | overlap 794072 794079 AGCTAGCCGCAGGTT TCTCAAAAC ACT GTTTTGAGG TTGTGGATAGAACTG TERM 969 794079 - 794097 + F 78 -10.4 -2.61383 | overlap 794072 794078 GCTAGCCGCAGGTTT CTCAAAAC ACT GTTTTGAG GTTGTGGATAGAACT SPD_0782 794286 - 795779 + | type I restriction-modification system, M subunit, putative SPD_0783 795792 - 796403 + | type I restriction-modification system, S subunit, putative TERM 970 798491 - 798472 - g 71 -6.5 -4.15565 | TTGATGATTTTAAAA TTGAGGA GAAGTA TCCTCAA ATTGCGATTTCTGTC TERM 971 798736 - 798748 + G 73 -5.5 -4.53602 | GTCGTCACATTGTTT CGTTG ACT CAGCG TTTATTTAATATCAA SPD_0784 796482 - 799832 + | type I restriction-modification system, R subunit, putative TERM 972 800189 - 800207 + G 72 -10.4 -2.61383 | opp_overlap 800174 800188, overlap 800188 GACTGACGAAGTCAG CTCAAAAC ATG GTTTTGAG GTTGTAGATGAAACT TERM 973 800233 - 800221 - g 73 -7.7 -3.83205 | AGGTTGTAGATGAAA CTGAC GAA GTCAG TAACCATACCTACGG SPD_0785 800103 - 800303 + | hypothetical protein TERM 974 800311 - 800359 + T 100 -20.7 -2.74371 | opp_overlap 800311 800316, overlap 800316 CTTCCTAGGATAAAG CAAAACGCATAGTATCAAGGGTT TTC AACACTTGATACTATGCGTTTTC TGATGTTAAAGACTT TERM 975 800359 - 800311 - T 100 -20.7 -2.97475 | opp_overlap 800311 800316, overlap 800316 CTTCCTAGGATAAAG CAAAACGCATAGTATCAAGGGTT TTC AACACTTGATACTATGCGTTTTC TGATGTTAAAGACTT TERM 976 800316 - 800354 + T 100 -20.6 -4.55023 | opp_overlap 800311 800316, overlap 800311 TAGGATAAAGCAAAA CGCATAGTATCAAGGGTT TTC AACACTTGATACTATGCG TTTTCTGATGTTAAA TERM 977 800354 - 800316 - T 100 -20.6 -4.63479 | opp_overlap 800316 800311, overlap 800311 TAGGATAAAGCAAAA CGCATAGTATCAAGGGTT TTC AACACTTGATACTATGCG TTTTCTGATGTTAAA SPD_0786 800888 - 800418 - | transcriptional regulator of arginine metabolism expression, putative pepX 803178 - 800905 - | x-prolyl-dipeptidyl aminopeptidase TERM 978 801009 - 801021 + g 77 -7.7 -4.27465 | opp_overlap 801008 801009 TATAGAGGACTAAAC GGAGA GTG TCTCC TTCTTTTAGCTTGTA TERM 979 802145 - 802155 + g 70 -5.4 -4.35524 | AGATAGGAAAGTCCT GTTG TAG CAAC TTTTCCGTTTGACCA TERM 980 806185 - 806175 - g 70 -5.4 -4.39002 | opp_overlap 806170 806175 AAATTTGTCAGAAAA TAGC TAT GCTA TTATCTTGGTTGAAG dnaE 803524 - 806625 + | DNA polymerase III DnaE pfkA 806708 - 807715 + | 6-phosphofructokinase TERM 981 808314 - 808301 - g 73 -6.7 -4.19506 | AGTTGAAGTTGAAAA CGATG GTAT CATCG CTAAACAAAAAGGTG pyk 807774 - 809279 + | pyruvate kinase TERM 982 809328 - 809294 - T 72 -2.9 -5.38398 | gap 1, opp_overlap 809294 809315 809323 AGAAAAATATAAAAA CCTATCATATCCAGCT TTCT AGCCTG-TATGATGGG CTCTTTTTTTGTCCA TERM 983 809438 - 809450 + T 71 -7.7 -3.58905 | ACCGTATATATGTTA CTGAC TTC GTCAG TTCTATCTACAACCT TERM 984 809483 - 809463 - T 72 -8.3 -3.35996 | overlap 809464 CAGTTCTATCTACAA CCTCAAAGC AGT GCTTTGAGC AACCTGCGGCTAGCT TERM 985 809482 - 809464 - T 84 -11.8 -2.61383 | overlap 809463 AGTTCTATCTACAAC CTCAAAGC AGT GCTTTGAG CAACCTGCGGCTAGC SPD_0791 810650 - 810396 - | hypothetical protein SPD_0792 811086 - 811958 + | hypothetical protein SPD_0793 811971 - 812135 + | hypothetical protein SPD_0795 812591 - 812902 + | hypothetical protein SPD_0796 812906 - 813622 + | hypothetical protein TERM 986 813734 - 813693 - T 93 -6 -5.9218 | gap 1, opp_overlap 813693 CATATAACAAAAAAA CGAACAGGCTCTTTTTCTG TTATT CAGAAGA-GAACTTGTTCG TTTTTATCTTGATTT TERM 987 813693 - 813734 + T 90 -8.2 -5.16206 | gap 1, opp_overlap 813693 CATATAACAAAAAAA CGAACAGGCTCTTTTTCTG TTATT CAGAAGA-GAACTTGTTCG TTTTTATCTTGATTT SPD_0797 814567 - 813752 - | hypothetical protein TERM 988 814579 - 814559 - G 72 -3.3 -5.10154 | overlap 814561 814564 AGCTAAAACTAAAAA TCGAATCAT AGG ATGACTCCA ATCAAGAGAGAATAG SPD_0798 815469 - 814564 - | hypothetical protein TERM 989 814999 - 814988 - G 75 -3 -5.1963 | CTCAAGTAAGAAAAA TCAT GCTC ATGA CAAGCCAGACGATTT TERM 990 815320 - 815290 - G 70 -2.5 -5.03747 | overlap 815292 AAAGGTCCCAAAAAA GATTCTCCCCCAA CGATT TCGAGGGAGAAAA TGATAAACCTTGTCA TERM 991 815318 - 815292 - G 89 -9.5 -4.13963 | overlap 815290 AGGTCCCAAAAAAGA TTCTCCCCCAA CGATT TCGAGGGAGAA AATGATAAACCTTGT SPD_0799 815601 - 815470 - | hypothetical protein SPD_0800 815811 - 816170 + | capsular polysaccharide biosynthesis protein, putative SPD_0801 816133 - 817179 + | hypothetical protein TERM 992 819183 - 819168 - g 71 -7.6 -3.88498 | GTCCTAGATATCAAA GACCTA GTGG TAGGTC AGAAGCTAGAAGGTG SPD_0802 817281 - 819410 + | S1 RNA-binding domain-containing protein SPD_0803 819905 - 820177 + | hypothetical protein TERM 993 820245 - 820209 - f 88 -7.6 -4.99435 | gap 1, opp_overlap 820209 TGGAATAAGCAAAAA GCTTTAAATCAA-TAGT CTAA ACTGCTTGATTTAAAGC TTTTTTACTTTTATA TERM 994 820209 - 820245 + F 100 -9.8 -5.50313 | gap 1, opp_overlap 820209 TGGAATAAGCAAAAA GCTTTAAATCAA-TAGT CTAA ACTGCTTGATTTAAAGC TTTTTTACTTTTATA TERM 995 820293 - 820305 + F 74 -9.1 -2.96695 | opp_overlap 820284 820291 820292, overlap 820291 TGCAAACTAGGAAGC CAGCC ACA GGCTG TAATTTAGTCGGCAA SPD_0804 821150 - 821908 + | ABC transporter, ATP-binding protein SPD_0805 821910 - 823898 + | transporter, permease protein, putative TERM 996 823931 - 823904 - T 93 -7.8 -5.58209 | opp_overlap 823906, overlap 823906 CCAAATGTAAAAAAA GATACCTCGACT TCAA AATCGAGGTATT TCTTGTTTTCTAAAT TERM 997 823906 - 823929 + T 86 -8.2 -4.72617 | opp_overlap 823904 823906 AAATGTAAAAAAAGA TACCTCGACT TCAA AATCGAGGTA TTTCTTGTTTTCTAA TERM 998 823929 - 823906 - T 100 -10.4 -4.41528 | opp_overlap 823906, overlap 823904 AAATGTAAAAAAAGA TACCTCGACT TCAA AATCGAGGTA TTTCTTGTTTTCTAA SPD_0806 824531 - 823941 - | hypothetical protein TERM 999 824195 - 824183 - G 75 -7.7 -3.99898 | opp_overlap 824193 CAACGAAGCTAGAAA TGGCA GCG TGCCA AGGATTGGTAAATTC SPD_0807 825486 - 824611 - | IS1239, transposase, putative SPD_0808 825832 - 825719 - | hypothetical protein TERM 1000 825942 - 825959 + H 73 -8.5 -3.29973 | TTTTATAAGTTGATG TTAGGAC ACTT GTCCTAA TTCATAAATTTTTAG TERM 1001 826104 - 826123 + H 100 -12.2 -5.1675 | opp_overlap 826100 826097 CGTCAGAAGATTGCA GAGCAGGT GAAA ACCTGCTC TTTTTTCATGAGTCA cad 826193 - 827668 + | lysine decarboxylase TERM 1002 829349 - 829321 - g 85 -8.9 -4.17608 | overlap 829324 TGCATCGAAAAAATA CCACCCTGTCAAA GAT TTTGACAAGGAAG GCTGGAAAAAACGCC TERM 1003 829346 - 829324 - g 82 -11.4 -3.09579 | overlap 829321 ATCGAAAAAATACCA CCCTGTCAAA GAT TTTGACAAGG AAGGCTGGAAAAAAC speE 828605 - 829465 + | spermidine synthase lys1 829462 - 830721 + | hypothetical protein nspC 830721 - 831848 + | carboxynorspermidine decarboxylase TERM 1004 832255 - 832269 + G 75 -10 -3.03443 | CAGTCGTTTTGCTGA GGCCTT GGA AAGGCC TGTCTATGATGCTAA SPD_0814 831845 - 832930 + | hypothetical protein SPD_0815 832940 - 833815 + | hydrolase, carbon-nitrogen family protein TERM 1005 833953 - 833991 + T 89 -7 -5.26918 | gap 1, opp_overlap 833958, overlap 833958 TTTAAAATATTAGCA AAAAAGCAAATAG-CAG TAACTT CTGTCTATTTGCTTTTC TTTTTTATAGAATAT TERM 1006 833986 - 833958 - T 89 -6.9 -5.2112 | gap 1, opp_overlap 833953 833958 AATATTAGCAAAAAA GCAAATAG-CAG TAACTT CTGTCTATTTGC TTTTCTTTTTTATAG TERM 1007 833958 - 833986 + T 93 -6.9 -5.49579 | gap 1, opp_overlap 833958, overlap 833953 AATATTAGCAAAAAA GCAAATAG-CAG TAACTT CTGTCTATTTGC TTTTCTTTTTTATAG SPD_0816 834805 - 833996 - | Cof family protein SPD_0817 835352 - 836023 + | hypothetical protein TERM 1008 836032 - 836059 + F 88 -7.8 -5.02074 | opp_overlap 836037, overlap 836037 AAGTTAGCTTACTAA AAAAATGTCGGA ATTT TCCGGCATTTTC TTTTTTCACAAATAG TERM 1009 836037 - 836054 + F 93 -7.7 -5.42198 | opp_overlap 836037, overlap 836032 AGCTTACTAAAAAAA TGTCGGA ATTT TCCGGCA TTTTCTTTTTTCACA TERM 1010 836054 - 836037 - f 84 -5.5 -5.52986 | opp_overlap 836037 836032 AGCTTACTAAAAAAA TGTCGGA ATTT TCCGGCA TTTTCTTTTTTCACA TERM 1011 836185 - 836197 + F 76 -2.7 -5.54079 | GAAGATAGTTAAGAA GAATA GGA TGTTC TTTTTTCCTTTTTGG SPD_0818 836265 - 837173 + | transcriptional regulator, LysR family protein lspA 837170 - 837631 + | signal peptidase II rluD 837621 - 838508 + | ribosomal large subunit pseudouridine synthase D cbpE 838511 - 840394 + | choline binding protein E TERM 1012 840402 - 840419 + F 70 -4.1 -4.80882 | opp_overlap 840402 AACAGTAGTAGAAAA GAAGGTT TTAG GGCCTTC TTTTTCCTATCAACT proB 840495 - 841604 + | gamma-glutamyl kinase proA 841614 - 842876 + | gamma-glutamyl phosphate reductase TERM 1013 843387 - 843401 + G 76 -7.1 -4.21994 | GCGACAGGTCTTGCA GGCTG TGGAC CAGCC TTTGTCTATCTCTTT proC 842880 - 843677 + | pyrroline-5-carboxylate reductase TERM 1014 843678 - 843697 + F 71 -5.7 -4.4767 | opp_overlap 843678 GAACTAGGTAAATAA GAGGTAG CTTTGA CTGCCTC TTTTATGGTGGCTGA tdk 843793 - 844431 + | thymidylate kinase holB 844428 - 845318 + | DNA polymerase III subunit delta' SPD_0827 845358 - 845675 + | DNA replication intiation control protein YabA SPD_0828 845678 - 846547 + | hypothetical protein TERM 1015 846923 - 846945 + G 76 -9.2 -3.67597 | overlap 846924 846934 AGAAAACCTTGCTTA TCAGGTTGGT TGG ACCAACTTGG TTCTTAAATGGGAAG TERM 1016 846924 - 846944 + G 73 -10.5 -2.80344 | overlap 846923 846934 GAAAACCTTGCTTAT CAGGTTGGT TGG ACCAACTTG GTTCTTAAATGGGAA SPD_0829 846774 - 847292 + | hypothetical protein TERM 1017 847338 - 847361 + F 79 -4.6 -5.27938 | opp_overlap 847338 AAAATGGTTACCAAA GGCGATAG AAGAAAAA CTATCGTC TTTTTCTTTGCAAAT TERM 1018 847790 - 847775 - g 83 -6.2 -5.10933 | overlap 847778 TCAGGTAAAAGAAAA TGACTT ACAG AAGTCA AAAAACTTAACTTCA TERM 1019 847836 - 847796 - g 91 -7.7 -5.20154 | overlap 847778 ACAGAAGTCAAAAAA CTTAACTTCAGAAGTAAAA GAT TTTAACCTCAGAAGTAAAG AAAATGAACTTCAAG SPD_0831 847401 - 848048 + | hypothetical protein SPD_0830 848426 - 848037 - | IS1381, transposase OrfB TERM 1020 848095 - 848137 + g 70 -3.6 -4.98531 | opp_overlap 848072, overlap 848082 848072 848069 848118 848121 ATTCGTAATCCGAAG CGTTTACGATGATTTTGATA GGT TGTTGAAAACATTTTAAACG TTTTTACTTTGGCAA SPD_0832 848841 - 848452 - | IS1381, transposase OrfA TERM 1021 849153 - 849172 + H 91 -5 -5.89921 | opp_overlap 849153 849151 GAAAATGACTAAACA GGGAAG TTTGCCTT CTTCCC TTTTTTTGTTATACT TERM 1022 849237 - 849227 - H 80 -6.8 -4.65895 | opp_overlap 849227 TGTGGGAGTGAAAAA GTCC TGT GGAC TTTTTCAGCCTGAGC TERM 1023 849227 - 849237 + H 76 -6.8 -4.59773 | opp_overlap 849227 TGTGGGAGTGAAAAA GTCC TGT GGAC TTTTTCAGCCTGAGC gid 849335 - 850669 + | tRNA (uracil-5-)-methyltransferase Gid pyrH 850753 - 851490 + | uridylate kinase frr 851499 - 852056 + | ribosome recycling factor TERM 1024 852072 - 852094 + F 84 -8.4 -4.63218 | AAATAAACAGAAAAA CTCAGTTGGC ATT GCTGGCTGAG TTTTATTCGAAAGAA SPD_0836 852077 - 852970 + | hypothetical protein SPD_0837 852979 - 853194 + | hypothetical protein TERM 1025 853319 - 853334 + G 70 -3.3 -4.87291 | opp_overlap 853311, overlap 853311 CAACTGAGTCATCCA GATGA CCTGTT TCATC TTTTTGGTTCCAATG TERM 1026 853596 - 853584 - g 71 -4.9 -4.48713 | TTTACGAAGAAGAAA TTATC AAA GATAA TACTGGGAAACCTAT SPD_0838 853280 - 854248 + | PhoH family protein SPD_0839 854441 - 854941 + | acetyltransferase, GNAT family protein SPD_0840 854944 - 855171 + | hypothetical protein TERM 1027 855361 - 855335 - f 83 -5.9 -5.03994 | gap 1, opp_overlap 855335 855334 TTTTATATATAAAAA GAAGCTGGGACT AAAG AG-CTCAGCTTC CTTTGGTTTATATAA TERM 1028 856782 - 856750 - f 79 -5.6 -5.04601 | TTCATAAATCAAAAA TGTGACGGTTTCAT TGTAT ATGAAACCGCTTCA AAAATCAAGAAAAAC SPD_0842 856859 - 857428 + | acetyltransferase, GNAT family protein TERM 1029 857430 - 857454 + F 95 -8.7 -5.54885 | opp_overlap 857430 857429 TTGCAAATAAATAAG CAGTTGAAAAG AAA TTTTTCGACTG TTTTTTCTTCCTCTT celA 857496 - 858146 + | competence protein CelA TERM 1030 858855 - 858875 + G 86 -7.6 -5.1675 | TATCCACCTCTTTGC CCTATCTG GCATG CAGGTAGG TTTTTTCATGAATGG TERM 1031 859214 - 859228 + G 80 -10 -3.64318 | GTCTAGTCATCTCCT TGGGCA TAT TGCCCA TTCTATCCTTCTATT celB 858130 - 860370 + | competence protein CelB SPD_0845 860769 - 861245 + | ABC transporter, ATP-binding protein TERM 1032 861645 - 861629 - g 82 -3.7 -5.42862 | opp_overlap 861644, overlap 861644 AGACGTGCAAAAAAA TCTTTTG ACG CGAAAGA CAGAAATTCTGACTT TERM 1033 862299 - 862330 + G 72 -9.6 -3.03159 | gap 1 CTCATTGGGATTGTT GGCTTA-TTGTTTGG CAT CCAAACAATTCAGCC TCTTCAAAGGATTGC SPD_0846 861360 - 862541 + | hypothetical protein TERM 1034 862607 - 862573 - f 73 -7.2 -3.98991 | opp_overlap 862579, overlap 862578 CTAAAGAAAAACTAA CATAGGGAGAGAATCA ACT TGATTCTCTCTTTTTG ATTCGAAAACCAAAC TERM 1035 862602 - 862578 - f 75 -10.1 -2.5719 | opp_overlap 862579, overlap 862573 GAAAAACTAACATAG GGAGAGAATCA ACT TGATTCTCTCT TTTTGATTCGAAAAC TERM 1036 862579 - 862601 + F 100 -13.6 -4.8622 | opp_overlap 862578 862573 AAAAACTAACATAGG GAGAGAATCA ACT TGATTCTCTC TTTTTGATTCGAAAA TERM 1037 862779 - 862767 - f 74 -6.3 -4.2828 | CCCTACGGATGAAAA GTTTC GAA GAAAC GCTATCATAACGTGC TERM 1038 862792 - 862820 + F 76 -6.8 -4.59846 | gap 1, overlap 862793 AACGCTATCATAACG T-GCGGGCTTGTA TATT TACGAGTCCGCTA TTGTTTTTCTCTAAT TERM 1039 862793 - 862818 + F 91 -11.9 -3.89226 | overlap 862792 ACGCTATCATAACGT GCGGGCTTGTA TATT TACGAGTCCGC TATTGTTTTTCTCTA infC 862821 - 863378 + | translation initiation factor IF-3 rpmI 863411 - 863611 + | 50S ribosomal protein L35 rplT 863663 - 864022 + | 50S ribosomal protein L20 TERM 1040 864033 - 864055 + F 80 -7.1 -4.59773 | gap 1, opp_overlap 864035 AATAACAACTGATGA GACTGGAACA GGAT TGT-CCAGTC TTTTTAAAAATAAAG TERM 1041 864137 - 864153 + G 75 -5.9 -4.67038 | CTTGAAAAATCAATC GCATTTT ATC AAGATGC TTTTGGTTTTAAAGA gloA 864080 - 864460 + | lactoylglutathione lyase TERM 1042 864471 - 864500 + F 93 -7.3 -5.47218 | opp_overlap 864476 AATAATTTCGTGCAA GTTAAGTAGAATA TTCG TTTTCTACTTGAC TTTTTTTAGCTGAAA TERM 1043 864648 - 864667 + F 100 -10 -5.06016 | opp_overlap 864648 TACGATTTTAACTGA GGCCTTGC ACTA GCAAGGTC TTTTCTTTATCTGGT pyrK 864710 - 865510 + | dihydroorotate dehydrogenase electron transfer subunit pyrDb 865521 - 866459 + | dihydroorotate dehydrogenase 1B TERM 1044 866583 - 866593 + G 81 -5.4 -5.11063 | TAAGATTTATTTTTT TAGC TCT GCTA TTTTTCTTAGCTAGT lytB 866558 - 868666 + | endo-beta-N-acetylglucosaminidase precursor, putative TERM 1045 868732 - 868709 - T 93 -9 -4.76892 | opp_overlap 868709 ATAGTAAGTTAAAAA TCCTGATTTC AAGT AAAATCAGGA TTTTTTCATGGATGC TERM 1046 868709 - 868732 + T 90 -8.3 -5.1675 | opp_overlap 868709 ATAGTAAGTTAAAAA TCCTGATTT CAAGTA AAATCAGGA TTTTTTCATGGATGC pavA 870382 - 868727 - | adherence and virulence protein A TERM 1047 869083 - 869098 + g 76 -3.3 -5.24449 | TTTTGCCATCGCTTG CTAGA TATTGT TCTAG TTTTTTGCGTTTCTG TERM 1048 869680 - 869694 + g 74 -6.4 -4.3255 | opp_overlap 869659, overlap 869679 869681 TGAAGGAAGTCTCAG TCAAGC ATG GCTTGG TTTCTTGATTGAAAA SPD_0855 870487 - 870984 + | putative metalloprotease TERM 1049 871332 - 871347 + G 72 -4.7 -4.67697 | GCGCATTGATTTTTC TCCCA CGAATC TGGGA TTTATTATTTTAAAC dgkA 870965 - 871360 + | diacylglycerol kinase era 871377 - 872276 + | GTP-binding protein Era TERM 1050 872280 - 872301 + F 89 -8.7 -4.40561 | opp_overlap 872280, overlap 872277 AGAGAATACTAAGTA GAGGTAGGC TCAT GCCTGCTTC TTGTTTTTACAGAAG TERM 1051 873109 - 873119 + G 76 -6.8 -4.38154 | TTCAACTAGGCGGAC GTGG AAC CCAC TTTTGTCCAAACTGT mutM 872325 - 873149 + | formamidopyrimidine-DNA glycosylase coaE 873149 - 873754 + | dephospho-CoA kinase pmrA 873741 - 874940 + | multi-drug resistance efflux pump secG 875129 - 875362 + | preprotein translocase subunit SecG TERM 1052 875685 - 875696 + GF 72 -4.4 -4.73108 | GGGGATTTTTCATGC CCAT AAAA ATGG TTTTGGTTTTGTCAG TERM 1053 876327 - 876337 + GF 73 -5.4 -4.55093 | GGAGCTTGGGGTTCA CATC GCA GATG TTTCTTATTATGTGA rnr 875464 - 877818 + | ribonuclease R smpB 877781 - 878248 + | SsrA-binding protein tehB 878264 - 879124 + | tellurite resistance protein TehB TERM 1054 879136 - 879155 + F 100 -7.2 -6.04324 | opp_overlap 879136, overlap 879130 GTAAACACACATGAA GATTAGGA ATTT TCCTGATC TTTTTTCTTTTTTAC coiA 879197 - 880150 + | competence protein CoiA pepF 880169 - 881971 + | oligoendopeptidase F SPD_0867 881973 - 882686 + | O-methyltransferase TERM 1055 882957 - 882945 - g 74 -4.9 -4.68994 | ATGACCATCCAAAAA GTTTT TGA AAAAC AATATGGCTCAGAGC TERM 1056 883504 - 883488 - g 78 -3.7 -5.34632 | AAGAAAACAGAAAAA TCATCTA ATA TTGATGA CTACAAAGAAAAATT prsA 882753 - 883694 + | foldase protein PrsA TERM 1057 883822 - 883854 + T 100 -12.2 -4.76874 | opp_overlap 883825 ATTAATTTATCCGAA GGATTTAGTTCTGT ATTGC ACAGAGCTAAGTCC TTTTAGTTTTATCTT SPD_0869 884154 - 883912 - | hypothetical protein TERM 1058 884294 - 884340 + r 89 -11.8 -3.26471 | opp_overlap 884297, overlap 884297 884299 884334 TTAATTTCATAATAA AAACACCCCAAAAGTTAGAT TTTTTCT GTCTAACTTTTGGGGTGTAG TTCATGTACACCTGA TERM 1059 884337 - 884297 - R 100 -17.2 -5.19328 | opp_overlap 884297 884294 884299 884334 ATTTCATAATAAAAA CACCCCAAAAGTTAGA TTTTTTCTG TCTAACTTTTGGGGTG TAGTTCATGTACACC TERM 1060 884297 - 884337 + r 100 -17.9 -2.81547 | opp_overlap 884297, overlap 884294 884299 884334 ATTTCATAATAAAAA CACCCCAAAAGTTAGAT TTTTTCT GTCTAACTTTTGGGGTG TAGTTCATGTACACC TERM 1061 884299 - 884335 + r 95 -14.7 -2.95521 | opp_overlap 884297, overlap 884297 884294 884334 TTCATAATAAAAACA CCCCAAAAGTTAGAT TTTTTCT GTCTAACTTTTGGGG TGTAGTTCATGTACA TERM 1062 884811 - 884832 + r 76 -6.7 -4.60255 | gap 1, opp_overlap 884811 884831, overlap 884831 TGTTCATATCAAAAA GGTATTGGCA AGT TGC-AATACC TTTTTACAAGGTTCT TERM 1063 884832 - 884811 - R 80 -6.7 -4.8048 | gap 1, opp_overlap 884811 884831, overlap 884831 TGTTCATATCAAAAA GGTATTGGCA AGT TGC-AATACC TTTTTACAAGGTTCT SPD_0870 885534 - 884914 - | phosphoglycerate mutase family protein SPD_0871 886016 - 885534 - | regulatory protein, putative SPD_0872 886858 - 886016 - | hypothetical protein SPD_0873 887753 - 886953 - | hypothetical protein glmU 887897 - 889276 + | UDP-N-acetylglucosamine pyrophosphorylase TERM 1064 889549 - 889537 - g 82 -7.7 -4.51097 | overlap 889539 GGAAGTAGGAGAAAA CACAG CCC CTGTG GCAGCTGCCCTTCGT SPD_0875 889286 - 889831 + | hydrolase, NUDIX family protein SPD_0876 889843 - 890157 + | hypothetical protein mtnN 890174 - 890866 + | 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase TERM 1065 891347 - 891321 - g 86 -10.3 -4.00445 | overlap 891344 GATCAGCAACAACAA TTGACCCTTCA AGCCA TGAAGGATCAA GAAAATCTTAAGCTA SPD_0878 890943 - 891434 + | hypothetical protein SPD_0879 891532 - 892122 + | DNA polymerase III subunit epsilon TERM 1066 892901 - 892917 + G 83 -9.5 -3.89411 | opp_overlap 892900, overlap 892898 892908 GGTAGATGATATCAC TCAGAGA GAG TCTCTGA TTCTTGGTATTTTGA SPD_0880 892131 - 893894 + | hypothetical protein TERM 1067 893922 - 893905 - f 100 -9.9 -5.5112 | TTTAGTAATAAAAAA GAGGAAC GGTT GTTCCTC CCATGATAGGTAAGT TERM 1068 893932 - 893955 + F 85 -6.8 -5.37345 | TTCCTCCCATGATAG GTAAGTATTC TTGT GAATGCTTGC TTTTTTGTGGTTGCA SPD_0882 894614 - 894754 + | IS630-Spn1, transposase Orf2, truncation SPD_0883 894915 - 895115 + | hypothetical protein TERM 1069 895510 - 895495 - g 70 -3.2 -5.00196 | CGTGAAAGAAGAAAA TGGCTC AGCA GAGACA GAAACTAAACTAGTA SPD_0884 895157 - 895561 + | hypothetical protein TERM 1070 895611 - 895637 + F 83 -7.3 -4.80396 | TTTTCGTTCACAAAA GCAGCGATGAG TAATC CTTGTCGTTGC TTTTTGGCTATTTTG TERM 1071 896322 - 896332 + G 70 -8.2 -3.71527 | TCTCATTTACACTCT GGGC ATG GCCC TTCCTTTCTTGGTCT ccdA-2 895792 - 896499 + | cytochrome c-type biogenesis protein CcdA SPD_0886 896510 - 897067 + | thioredoxin family protein TERM 1072 897079 - 897101 + F 100 -10 -4.32049 | opp_overlap 897079 897074 CTAGAATCGATAAAA TCTGATTACA AGA TGTAGTCAGA TTTTGGTAACTTCTA TERM 1073 897101 - 897079 - f 82 -7.8 -4.49337 | opp_overlap 897079, overlap 897074 CTAGAATCGATAAAA TCTGATTACA AGA TGTAGTCAGA TTTTGGTAACTTCTA TERM 1074 897173 - 897207 + F 87 -6.4 -5.42605 | opp_overlap 897176, overlap 897174 GAAAAACGCGTGACA TCAGTGGAAATCCGTC TTA GACTAACTTCCACTGG TTTTCTTTTTCTTGA TERM 1075 897174 - 897206 + F 73 -7.7 -3.83123 | opp_overlap 897176, overlap 897173 AAAAACGCGTGACAT CAGTGGAAATCCGTC TTA GACTAACTTCCACTG GTTTTCTTTTTCTTG TERM 1076 898677 - 898695 + G 74 -6 -4.43844 | opp_overlap 898672 898677 GAATTTAAAACACCA TTGGTACC TCT GTTACCAA TTTTATCGATCATCA SPD_0887 897441 - 898832 + | amino acid permease family protein lmb 898975 - 899892 + | adhesion lipoprotein phtD 899900 - 902461 + | pneumococcal histidine triad protein D precursor TERM 1077 902487 - 902513 + F 100 -9.6 -5.00616 | opp_overlap 902492 GGAGCATATTTTATG GAGAAGTAAC CTTTCGT GTTACTTCTC TTTTTTAGAAAAACG TERM 1078 902573 - 902600 + F 77 -8.6 -3.55815 | opp_overlap 902559 902586 902594, overlap 902554 ATAGTAAACTATTTA CTGGTTAATTAA ATGG TTAAATAACCAG TTTAGAAAACTATTT TERM 1079 902713 - 902693 - g 73 -8.3 -3.69447 | opp_overlap 902693 902696, overlap 902691 902696 TCAGTAAAAAATATA TAGCAGCTG GAT CAGCTGTTA TCGTATCCTTGAGTC TERM 1080 902693 - 902713 + G 72 -10.5 -2.7044 | opp_overlap 902691 902693 902696, overlap 902696 TCAGTAAAAAATATA TAGCAGCTG GAT CAGCTGTTA TCGTATCCTTGAGTC TERM 1081 902696 - 902710 + G 79 -10 -3.49858 | opp_overlap 902693 902691 902696, overlap 902693 GTAAAAAATATATAG CAGCTG GAT CAGCTG TTATCGTATCCTTGA TERM 1082 902710 - 902696 - g 72 -10 -2.62912 | opp_overlap 902696 902693, overlap 902693 902691 GTAAAAAATATATAG CAGCTG GAT CAGCTG TTATCGTATCCTTGA TERM 1083 905216 - 905206 - g 71 -4 -4.93318 | GAGAAGGTAGAAAAA GAAA AAC TTTC TGAAACTGGGAATAG phtE 902671 - 905790 + | pneumococcal histidine triad protein E precursor TERM 1084 905823 - 905873 + F 95 -8.7 -4.93661 | gap 1, opp_overlap 905823 AGTCTGAATCAAAAA TGAAGTTCTCTCAAAAGTTAGA AATAAAAC TCTGACTT-TGGGAGAATTTCA TTTTATTATTAATAT TERM 1085 905937 - 905956 + F 71 -5.2 -4.54253 | opp_overlap 905937, overlap 905946 TGGAATATTTACTAA TTAATTAA CTGG TTAATTAA TTTATTTAATCATTT TERM 1086 906679 - 906704 + F 77 -9.9 -2.97029 | gap 1, opp_overlap 906678 906683 906686, overlap 906678 906681 906696 TCTATTTCAATCTAC GATAGT-ACCAC ATG GTGGTCACTATC ATTTCATTCCTGAGA TERM 1087 907703 - 907685 - g 71 -7.4 -3.88985 | opp_overlap 907688, overlap 907688 AAAAGCTGCCACAAA CAAGGCTG ATG CAGACTTG GATGAAGTAAACAGT SPD_0893 907590 - 908219 + | hypothetical protein TERM 1088 908255 - 908223 - T 100 -9.9 -5.22006 | opp_overlap 908227, overlap 908227 908229 CCAGTAGAATAAAAA GAAAGGCGAAGTAGC TGA GCTACCTCGTCTTTT TAGCTTTTATAAGCT TERM 1089 908251 - 908227 - T 100 -10.7 -5.09221 | opp_overlap 908227, overlap 908223 908229 TAGAATAAAAAGAAA GGCGAAGTAGC TGA GCTACCTCGTC TTTTTAGCTTTTATA TERM 1090 908227 - 908251 + T 100 -10.7 -4.89729 | opp_overlap 908227 908223 908229 TAGAATAAAAAGAAA GGCGAAGTAGC TGA GCTACCTCGTC TTTTTAGCTTTTATA TERM 1091 908249 - 908229 - T 84 -11.9 -2.75415 | opp_overlap 908227, overlap 908227 908223 GAATAAAAAGAAAGG CGAAGTAGC TGA GCTACCTCG TCTTTTTAGCTTTTA pepT 909482 - 908262 - | peptidase T TERM 1092 909746 - 909720 - g 70 -9.4 -2.70946 | overlap 909719 909717 TTTTTTCACAAATAT TCGTCGTGGGGT GAG ACCCCAAGACCA CGAGATTCAGACTCT TERM 1093 910710 - 910697 - g 90 -5.3 -5.52986 | ATCTTATCAAAAAAA TGCTT GAAA AAGCA GGCAAGTTACCCAAA hemH 909637 - 910731 + | ferrochelatase TERM 1094 910740 - 910762 + T 89 -8.5 -4.32651 | opp_overlap 910740 AGAGTAAAGAAAAAA GGATTTAGC TTTGC GCTAGATCC TTTTAATCGATTATT TERM 1095 910762 - 910740 - T 89 -6.3 -5.69793 | opp_overlap 910740 AGAGTAAAGAAAAAA GGATTTAGC TTTGC GCTAGATCC TTTTAATCGATTATT mscL 911150 - 910773 - | large conductance mechanosensitive channel protein MscL TERM 1096 910814 - 910826 + g 88 -4.1 -5.75945 | TTTCTTGAAGGACTT CCAAT TCG GTTGG TTTTTTTTCGGCAGT SPD_0897 911663 - 911232 - | GtrA family protein SPD_0898 911786 - 912295 + | hypothetical protein TERM 1097 912306 - 912326 + F 86 -8.3 -4.8048 | opp_overlap 912306 AATAGAAGAAGATAA GCTAGGTAG TTC TTACCTGGC TTTTTCCTATGGAAA TERM 1098 912328 - 912342 + F 70 -7.2 -3.86194 | AGTTCTTACCTGGCT TTTTCC TAT GGAAAA TTTCTAAGGAAACTT TERM 1099 912485 - 912500 + F 89 -3.2 -5.89921 | ATATGTATAGGGAAA CTCTTG AATA CGGGAG TTTTTTTGTTATACT TERM 1100 912679 - 912705 + F 87 -6.6 -5.45802 | overlap 912687 TCACATGAAGATGCC TCTTAGTCCCTA GTC TAGCGACTGGGA TTTTTATTTTCCAAA TERM 1101 912687 - 912704 + F 73 -7.7 -3.86397 | overlap 912679 AGATGCCTCTTAGTC CCTAGTC TAGC GACTGGG ATTTTTATTTTCCAA TERM 1102 913603 - 913593 - g 70 -3.2 -4.92385 | TATATCGAAACAAAA GAAG TGG CTCC AATCGAAGAAGTAAA asd 912810 - 913886 + | aspartate-semialdehyde dehydrogenase TERM 1103 913899 - 913916 + F 87 -9.9 -3.9392 | TAGTCATATCGTTTA GGAGTTC AGAT GAACTCC TTCTTTGAAATAGAG TERM 1104 914303 - 914290 - g 76 -6.7 -4.35483 | CCTTACTACAACAAA CCTTC TCAA GAAGG AATGTATCAGCATTT dapA 913942 - 914877 + | dihydrodipicolinate synthase TERM 1105 914892 - 914917 + T 82 -4.1 -5.4593 | gap 1, opp_overlap 914887 914892, overlap 914905 ATAAAGACAATAAAA TCCATGA-CC GAATGAA GGATCATGGA TTTTTCTTATTTTCC TERM 1106 914917 - 914892 - T 77 -5.5 -4.96657 | opp_overlap 914892 914905, overlap 914887 ATAAAGACAATAAAA TCCATGACC GAATGAAG GATCATGGA TTTTTCTTATTTTCC trmE 916297 - 914924 - | tRNA modification GTPase TrmE TERM 1107 916326 - 916342 + r 80 -6.6 -4.68655 | overlap 916323 ATTAATAGCTCTTTT CTTGGA AATTC TCCAAG TTTCTTTTCAAATTG TERM 1108 916429 - 916408 - R 100 -9.5 -4.70659 | opp_overlap 916408 916425 TTGGAGATTGAAAAA GCCTAAGCA ATTC TGCTTAAGC TAGCTTATTTAGTAC xylH 916616 - 916434 - | 4-oxalocrotonate tautomerase tdk 916739 - 917338 + | thymidine kinase SPD_0905 917328 - 917807 + | acetyltransferase, GNAT family protein prfA 917817 - 918896 + | peptide chain release factor 1 TERM 1109 918984 - 919009 + G 77 -4.8 -4.87389 | CTTTTGTCTATCGTA GTCTGAAAAA TCTATC TTTTACAGAC TTTATTTTTGCCCTC TERM 1110 919303 - 919288 - g 70 -2.6 -5.14563 | gap 1, overlap 919290 CGCTCTAGCAAAAAA TAGACCA GAT TGGTC-A GTGACAGCAGCAGAT TERM 1111 919302 - 919290 - g 77 -7.7 -4.20707 | overlap 919288 CTCTAGCAAAAAATA GACCA GAT TGGTC AGTGACAGCAGCAGA TERM 1112 919697 - 919685 - g 70 -7.7 -3.76373 | GTTCGAACACTCAAA GACCA ATT TGGTC AAAATAGGATGGTTG hemK 918896 - 919735 + | HemK protein SPD_0908 919719 - 920321 + | Sua5/YciO/YrdC/YwlC family protein SPD_0909 920323 - 920754 + | acetyltransferase, GNAT family protein glyA 920816 - 922072 + | serine hydroxymethyltransferase TERM 1113 922233 - 922256 + G 79 -9.7 -3.70511 | opp_overlap 922229, overlap 922240 GATGAAGCCAAGACT GGGATTTTC GAAGAA GAAAATCCC TTCTTCAATCATATT TERM 1114 922345 - 922362 + G 74 -4.1 -5.17507 | GCATTTCTGAAAATC TCAAGAC CAAT GACTTGA TTTTTGTTCAATTTT SPD_0911 922047 - 923054 + | hypothetical protein TERM 1115 923040 - 923030 - f 70 -4 -4.87291 | TATCTTAATCAAAAA TATC GAG GATA TCCAAAGTAAATAAT pvaA 923054 - 923668 + | hypothetical protein TERM 1116 923658 - 923676 + F 85 -6.7 -5.21236 | TCACTCTCTTTTCAA CATCTGG CTAGA CCAGGTG TTTTTGTTATAAGTT SPD_0913 923742 - 924716 + | hypothetical protein TERM 1117 924736 - 924759 + F 82 -5.3 -5.24129 | TTTCATGGTATAATG GATGGTAAC CGTAAC GTTGCCGTC TTTTTTGTCGGCCAA TERM 1118 925552 - 925564 + G 73 -7.7 -3.96327 | GCGATTTTTGGTAAG GAGTG GCG CACTC TTTATGGTCAAGACT TERM 1119 925837 - 925824 - g 90 -3.1 -5.94597 | GAATAGTAAAAAAAA TGCTC AGCT GAACA ATATTTCAAACGCCC rumA-1 924790 - 926421 + | 23S rRNA (uracil-5-)-methyltransferase RumA TERM 1120 926539 - 926549 + F 73 -4 -5.19879 | opp_overlap 926539 GCTCAATATAAAGAT TGAT AGG ATCA TTTTTATATTTAAAG TERM 1121 926875 - 926817 - f 73 -3.69999 -5.08015 | gap 4, opp_overlap 926820 926838, overlap 926819 926820 AACTCAAAAAATAAA TAGTTGGTGTGCTGCTTACAATATCCATT TTAAT AATGGATATTGTAAGCAGCATAC---C-A ATGAATTTAAAGATT TERM 1122 926877 - 926819 - f 100 -25.1 -4.13692 | opp_overlap 926820 926838, overlap 926817 926820 CTCAAAAAATAAATA GTTGGTGTGCTGCTTACAATATCCATT TTAAT AATGGATATTGTAAGCAGCATACCAAT GAATTTAAAGATTCT TERM 1123 926876 - 926820 - f 100 -28.6 -3.06588 | opp_overlap 926820 926838, overlap 926817 926819 TCAAAAAATAAATAG TTGGTGTGCTGCTTACAATATCCATT TTAAT AATGGATATTGTAAGCAGCATACCAA TGAATTTAAAGATTC TERM 1124 926820 - 926876 + F 100 -30.8 -2.65279 | opp_overlap 926817 926820 926819, overlap 926838 TCAAAAAATAAATAG TTGGTGTGCTGCTTACAATATCCATT TTAAT AATGGATATTGTAAGCAGCATACCAA TGAATTTAAAGATTC TERM 1125 926938 - 926965 + F 82 -5.7 -5.31275 | AATATGTAAATCTCA GACGATAGA AATTAAAAAC TCTATCGTC TTTTTTATACTCAAA SPD_0915 927770 - 928795 + | iron-compound ABC transporter, iron compound-binding protein TERM 1126 928845 - 928800 - g 81 -2.8 -5.64421 | gap 1, opp_overlap 928806 928808, overlap 928804 928808 ATGCGAAATAAAAAA CAAATAAACCTAGGCATAATT TTTGT AATC-TGCCTAGGTCTTCTTA TTACAATATTTTTGT TERM 1127 928841 - 928804 - g 76 -3.6 -5.26158 | gap 1, opp_overlap 928806 928808, overlap 928800 928808 GAAATAAAAAACAAA TAAACCTAGGCATAATT TTTGT AATC-TGCCTAGGTCTT CTTATTACAATATTT TERM 1128 928837 - 928808 - g 84 -6.6 -5.00234 | gap 1, opp_overlap 928808 928806, overlap 928804 928800 TAAAAAACAAATAAA CCTAGGCATAATT TTTGT AATC-TGCCTAGG TCTTCTTATTACAAT TERM 1129 929497 - 929523 + G 84 -8 -4.67608 | opp_overlap 929497 929499 929500 929502, overlap 929500 ATGTTAATAGGATAA GATCACTTGCAA TAA TTGCAAGTGTGC TTTTATGTTCAAGTA TERM 1130 929521 - 929499 - g 72 -9.2 -3.33348 | opp_overlap 929497 929500, overlap 929497 929500 929502 GTTAATAGGATAAGA TCACTTGCAA TAA TTGCAAGTGT GCTTTTATGTTCAAG TERM 1131 929500 - 929520 + G 85 -12.7 -3.26141 | opp_overlap 929499 929497 929500 929502, overlap 929497 TTAATAGGATAAGAT CACTTGCAA TAA TTGCAAGTG TGCTTTTATGTTCAA TERM 1132 929520 - 929500 - g 83 -12.7 -2.59527 | opp_overlap 929500 929497, overlap 929499 929497 929502 TTAATAGGATAAGAT CACTTGCAA TAA TTGCAAGTG TGCTTTTATGTTCAA TERM 1133 929518 - 929502 - g 71 -9.5 -2.82988 | opp_overlap 929500 929497, overlap 929500 929499 929497 AATAGGATAAGATCA CTTGCAA TAA TTGCAAG TGTGCTTTTATGTTC SPD_0916 928785 - 929792 + | iron-compound ABC transporter, permease protein TERM 1134 930164 - 930154 - g 71 -4 -4.91852 | GGTATTAAAAACAAA TAGT TTA ACTA CTGGAATTATTTCAA TERM 1135 930505 - 930521 + G 77 -5.1 -4.86862 | opp_overlap 930486 ACTTGGAGCAAATCC CGAGCTT TCA AGGCTTG TTTTAATTTTTTGCG SPD_0917 929792 - 930799 + | iron-compound ABC transporter, permease protein SPD_0918 930799 - 931593 + | iron-compound ABC transporter, ATP-binding protein SPD_0919 932495 - 932650 + | hypothetical protein TERM 1136 932802 - 932842 + F 100 -11.3 -4.96848 | opp_overlap 932801 GACAGTTACCAAGAG GGTCTAATTTTCACTGC TACTTAT GCAGTGGGAATTTGACC TTTTTATATAAGCAA SPD_0920 933334 - 933495 + | hypothetical protein TERM 1137 933621 - 933608 - g 85 -3.9 -5.58051 | AAAGAAAAAATAAAA GTATA CCTC TATAC ACGAGTATCTACGTC SPD_0921 933587 - 935266 + | site-specific recombinase, resolvase family protein SPD_0922 935489 - 936100 + | hypothetical protein SPD_0923 936413 - 936610 + | hypothetical protein TERM 1138 936627 - 936608 - f 79 -3.6 -5.47821 | opp_overlap 936608 ATTTACTCAAAAAAA TAAGAGCA AAAT TGCTATTA TTTTTTACAAATTGG TERM 1139 936608 - 936627 + F 73 -3.6 -5.055 | opp_overlap 936608 ATTTACTCAAAAAAA TAAGAGCA AAAT TGCTATTA TTTTTTACAAATTGG SPD_0924 936672 - 937487 + | hypothetical protein TERM 1140 937569 - 937543 - g 70 -9.6 -2.66329 | opp_overlap 937548, overlap 937542 937548 CGAATGGAACAATAT CAAAACAAAGGA CTT TCCTTTATTTCG GAAGGACTGCTTTTT TERM 1141 937564 - 937548 - g 73 -5.9 -4.49937 | opp_overlap 937548, overlap 937543 937542 GGAACAATATCAAAA CAAAGGA CTT TCCTTTA TTTCGGAAGGACTGC SPD_0925 937487 - 938341 + | hydrolase, putative TERM 1142 938594 - 938579 - g 75 -5.4 -4.7329 | opp_overlap 938579 AAAATTACCGAAAAA GTGCTG GATG CAACAC ATTTTGCTGAAGAAG SPD_0926 938453 - 939337 + | hypothetical protein TERM 1143 939340 - 939373 + F 72 -9.1 -2.73619 | opp_overlap 939350, overlap 939342 939350 GAAAGAGGATTAGTA TATAGAGAAAGCCTT TTTT AAGGCTTTTTGTATA CTTTAAAAGATAGTT TERM 1144 939350 - 939363 + F 84 -6.7 -5.06585 | opp_overlap 939350, overlap 939342 939340 TAGTATATAGAGAAA GCCTT TTTT AAGGC TTTTTGTATACTTTA TERM 1145 939363 - 939350 - f 71 -6.7 -4.18367 | opp_overlap 939350 939342 939340 TAGTATATAGAGAAA GCCTT TTTT AAGGC TTTTTGTATACTTTA nplT 939476 - 941239 + | neopullulanase SPD_0928 941325 - 941642 + | hypothetical protein SPD_0929 941688 - 941969 + | hypothetical protein TERM 1146 942341 - 942370 + F 89 -7.9 -5.34555 | opp_overlap 942344, overlap 942342 942344 942347 GGATAGAAACACAAG AAATAACGCACCA TTTT TGGTGCGTTATGC TTTTTTATGCTATAA TERM 1147 942342 - 942369 + F 90 -11.4 -3.79649 | opp_overlap 942344, overlap 942341 942344 942347 GATAGAAACACAAGA AATAACGCACCA TTTT TGGTGCGTTATG CTTTTTTATGCTATA TERM 1148 942344 - 942367 + F 100 -14 -3.46407 | opp_overlap 942344, overlap 942342 942341 942347 TAGAAACACAAGAAA TAACGCACCA TTTT TGGTGCGTTA TGCTTTTTTATGCTA TERM 1149 942367 - 942344 - f 100 -14 -4.54553 | opp_overlap 942342 942341 942344 942347 TAGAAACACAAGAAA TAACGCACCA TTTT TGGTGCGTTA TGCTTTTTTATGCTA TERM 1150 942347 - 942364 + F 90 -11.3 -3.83985 | opp_overlap 942344, overlap 942344 942342 942341 AAACACAAGAAATAA CGCACCA TTTT TGGTGCG TTATGCTTTTTTATG SPD_0930 942414 - 942890 + | transcriptional regulator, putative SPD_0931 942890 - 943651 + | hypothetical protein TERM 1151 943854 - 943864 + GF 70 -2.6 -5.03314 | opp_overlap 943854 943863 TTACTGAAGATGAAC TATA TGA TATA TTTTTTGAAAATAAG SPD_0932 943679 - 944455 + | hypothetical protein SPD_0933 944383 - 944835 + | hypothetical protein TERM 1152 944847 - 944868 + F 88 -5.9 -5.72622 | opp_overlap 944847 GTAGAGTCAGAAAAA GTAGGTTAG AAAT TTAGCCTAC TTTTTTCTTTGTCCG TERM 1153 945480 - 945530 + F 100 -9.3 -4.67556 | gap 1, overlap 945473 945483 GGAGCCACTAAGTTA TCTTATCGTTAG-CTGTCAAAACT GGTA GGTTTTGATAGGCTGGCGATATGA TTTTTGGGATATTGT TERM 1154 945483 - 945527 + F 79 -9.6 -3.25567 | gap 1, overlap 945473 945480 GCCACTAAGTTATCT TATCGTTAG-CTGTCAAAACT GGTA GGTTTTGATAGGCTGGCGATA TGATTTTTGGGATAT TERM 1155 945642 - 945603 - f 87 -12.4 -3.14564 | gap 1, opp_overlap 945602 945615, overlap 945615 TGAGGTCTTTAGGAA TCGTACTGACAATGTGAGG CAG CCTTACATTGTCAG-ACAA GTATAATGTTGAAAG SPD_0934 945667 - 946026 + | Tn5252, ORF 10 protein SPD_0935 946036 - 946365 + | Tn5252, ORF 9 protein SPD_0936 946388 - 947005 + | Tn5252, relaxase TERM 1156 948019 - 947996 - g 93 -7.4 -5.52096 | overlap 947997 AAACCCAAGAAAAAA TCGCCACCTT AAAC AAGATGGCGG AAGTCCTTATCAATT TERM 1157 948018 - 947997 - g 86 -10.9 -3.88817 | overlap 947996 AACCCAAGAAAAAAT CGCCACCTT AAAC AAGATGGCG GAAGTCCTTATCAAT SPD_0938 947686 - 948273 + | hypothetical protein SPD_0939 949172 - 948318 - | transcriptional activator, Rgg/GadR/MutR family protein TERM 1158 948759 - 948793 + g 80 -11.6 -2.75074 | opp_overlap 948757 948759 948760, overlap 948756 AATTTTGAAAAGATA GTCTGTCAGATGAAGA AGC TCTTCATCTGATGGAA TGATGTTCGAATCCA TERM 1159 948792 - 948760 - G 76 -10.7 -2.63891 | opp_overlap 948759 948756, overlap 948759 948757 ATTTTGAAAAGATAG TCTGTCAGATGAAGA AGC TCTTCATCTGATGGA ATGATGTTCGAATCC TERM 1160 949329 - 949346 + H 75 -8.5 -3.40558 | opp_overlap 949328 949329, overlap 949328 949343 TTGGTGGATAAAATG CTTAGGT GTAC ACCTAAG TCTTTAGAGTATCTA SPD_0940 949424 - 950719 + | UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase, putative TERM 1161 950746 - 950730 - g 78 -3.7 -5.24449 | GATAAAGTGAAAAAA GCATTAA TAA TTACTGC CCATCCAGATGATGC SPD_0941 950721 - 951329 + | hypothetical protein SPD_0942 951339 - 952121 + | hypothetical protein TERM 1162 952167 - 952153 - g 80 -4.3 -5.27399 | TAAGATATGAAAAAA TGTTG GCTTA CAACA AACTTTGAAGACTAT TERM 1163 952871 - 952847 - g 73 -8.7 -3.67141 | opp_overlap 952850 952854, overlap 952848 952854 952857 ATAATGTGATGGAAA CGAGAAATATC AAT GATATTCCTCA TTGGGCTAAAAATCC TERM 1164 952870 - 952848 - g 73 -10 -2.79803 | opp_overlap 952850 952854, overlap 952847 952854 952857 TAATGTGATGGAAAC GAGAAATATC AAT GATATTCCTC ATTGGGCTAAAAATC SPD_0943 952144 - 954036 + | hypothetical protein TERM 1165 954165 - 954179 + G 95 -8.6 -5.47218 | AGAATGTTGTGATTT GCTTTG GTG CAAAGC TTTTTTTCAATGAAG SPD_0944 954065 - 955171 + | hypothetical protein TERM 1166 955517 - 955529 + G 83 -3.4 -5.52986 | AAGAGAGATTTCGGA CACT CCTTT AGTG TTTTTTTCATCAGGT SPD_0945 955179 - 956489 + | AMP-binding enzyme, putative TERM 1167 957465 - 957422 - g 82 -10.6 -3.59698 | opp_overlap 957424, overlap 957423 957426 CTATTTTAGATAGAA TTCATATTTCACAAAAACCT AAAA AAGTTTTTGTGAAATATGTT GGTGGAGAGAATTTC TERM 1168 957464 - 957423 - g 93 -14.1 -2.75498 | opp_overlap 957424, overlap 957422 957426 TATTTTAGATAGAAT TCATATTTCACAAAAACCT AAAA AAGTTTTTGTGAAATATGT TGGTGGAGAGAATTT TERM 1169 957424 - 957463 + G 100 -15.4 -3.14463 | opp_overlap 957423 957422 957426 ATTTTAGATAGAATT CATATTTCACAAAAACCT AAAA AAGTTTTTGTGAAATATG TTGGTGGAGAGAATT TERM 1170 957461 - 957426 - g 93 -14.4 -2.64877 | opp_overlap 957424, overlap 957423 957422 TTTAGATAGAATTCA TATTTCACAAAAACCT AAAA AAGTTTTTGTGAAATA TGTTGGTGGAGAGAA SPD_0946 956491 - 957714 + | hypothetical protein TERM 1171 958407 - 958417 + G 70 -2.6 -5.01845 | CAGTTCATATGGGAA TAAT TTT ATTA TTTTTAGTTATTATG SPD_0947 957719 - 958654 + | hypothetical protein TERM 1172 959444 - 959454 + G 78 -4 -5.28778 | ATCATACAATTCCTT TTCA TGC TGAA TTTTTTGTAGATGGT SPD_0948 958669 - 959868 + | hypothetical protein SPD_0949 959932 - 960531 + | hexapeptide repeat-containing transferase TERM 1173 960853 - 960871 + F 71 -7.6 -3.65046 | opp_overlap 960853 AGATGAGGATCATAA TCATTTTT TGA AAAAATGA TTATTACGATAAAAG TERM 1174 961241 - 961254 + G 70 -3.1 -4.83615 | ACTAATATTATCTTG GCATT TATG AGTGC TTTTTCTGGACCGTC SPD_0950 960914 - 962125 + | transporter, major facilitator family protein TERM 1175 962620 - 962643 + F 81 -7.5 -4.34759 | CTTATAACATTTTTA GACGGTTAA TAGATT TTGACCGTC TTTCTTAATATTGTC TERM 1176 962709 - 962737 + F 73 -9 -3.17639 | opp_overlap 962716, overlap 962706 ATAAATTAATTTTAG TTCAAAATGTCC AGTTA GGACACTTTGAA TGATTTCTTAGTTTT SPD_0951 962784 - 963005 + | hypothetical protein TERM 1177 962998 - 963048 + F 100 -16.6 -4.14764 | opp_overlap 963003, overlap 963003 ATAAAATTCGCTTTA GAAAATAATCTCCTCAATTTCATA GAG TGTGAAAATGAGGAGATTATTTTA TTTGGTTCTTTGACA TERM 1178 963043 - 963003 - f 100 -14.3 -4.37092 | opp_overlap 963003 962998 ATTCGCTTTAGAAAA TAATCTCCTCAATTTCATA GAG TGTGAAAATGAGGAGATTA TTTTATTTGGTTCTT TERM 1179 963003 - 963043 + F 100 -16.5 -5.03713 | opp_overlap 963003, overlap 962998 ATTCGCTTTAGAAAA TAATCTCCTCAATTTCATA GAG TGTGAAAATGAGGAGATTA TTTTATTTGGTTCTT TERM 1180 963342 - 963312 - f 81 -9.8 -3.44289 | opp_overlap 963321, overlap 963313 963321 GAGAAACGCAATTAA TCCTCAAAAGGTTC CCC GAACCTTTTGAGTT CCACAGACGCATCAC TERM 1181 963341 - 963313 - f 87 -13.3 -2.6585 | opp_overlap 963321, overlap 963312 963321 AGAAACGCAATTAAT CCTCAAAAGGTTC CCC GAACCTTTTGAGT TCCACAGACGCATCA TERM 1182 963333 - 963321 - f 78 -7.7 -4.15508 | opp_overlap 963321, overlap 963313 963312 AATTAATCCTCAAAA GGTTC CCC GAACC TTTTGAGTTCCACAG TERM 1183 963321 - 963333 + F 81 -7.7 -4.27316 | opp_overlap 963313 963312 963321 AATTAATCCTCAAAA GGTTC CCC GAACC TTTTGAGTTCCACAG SPD_0952 963907 - 965136 + | cell division protein FtsW, putative ppc 965156 - 967852 + | phosphoenolpyruvate carboxylase TERM 1184 968145 - 968171 + F 100 -14.6 -5.52384 | TACCGCGCATCGACG TCCTCACACAAG TTT TTTGTGTGAGGA TTTTTTTGATGGAGG SPD_0954 968235 - 969269 + | hypothetical protein TERM 1185 969277 - 969298 + F 83 -6.5 -5.0133 | opp_overlap 969278, overlap 969278 TCGAATAAATAAGGT AGGGAGGAG GAGA CTCTTCCCA TTTTTTAAAAAGATG TERM 1186 969278 - 969297 + F 82 -10 -3.60316 | opp_overlap 969278, overlap 969277 CGAATAAATAAGGTA GGGAGGAG GAGA CTCTTCCC ATTTTTTAAAAAGAT TERM 1187 969582 - 969572 - g 79 -6.8 -4.52589 | CTTCTTTATACAAAA GGGA AGA TCCC AACCTTGCTCTCAGG SPD_0955 969338 - 970204 + | amino acid or sugar ABC transport systems, permease protein SPD_0956 970201 - 970959 + | ABC transporter, ATP-binding protein TERM 1188 971097 - 971084 - g 79 -5.3 -5.09521 | TGAAGAAATCAAAAA CAATG CCAA CATTG TGGAAGTCATAGGAG TERM 1189 971751 - 971738 - g 74 -4.5 -4.98255 | opp_overlap 971738 TTCTAAGTATAAAAA CAGCC GATC GACTG TAATTTTTAACAAAA dnaG 971049 - 972809 + | DNA primase rpoD 972812 - 973921 + | RNA polymerase sigma factor RpoD SPD_0959 973935 - 974264 + | hypothetical protein TERM 1190 974333 - 974279 - f 75 -10.1 -2.54448 | gap 1, opp_overlap 974280 974281, overlap 974278 974298 AACATATAAAAGCAT GTGAGAGACTGTTGGAAAAGTGAGGA AATT TCCCCTCTTTTCCTCTAGTCTCTC-C TTTCTTTTGCTGATT TERM 1191 974280 - 974333 + F 100 -10.3 -4.74518 | opp_overlap 974279 974278 974298, overlap 974281 ACATATAAAAGCATG TGAGAGACTGTTGGAAAAGTGAGGA AATT TCCCCTCTTTTCCTCTAGTCTCTCC TTTCTTTTGCTGATT TERM 1192 974281 - 974332 + F 95 -13.8 -3.43084 | opp_overlap 974279 974278 974298, overlap 974280 CATATAAAAGCATGT GAGAGACTGTTGGAAAAGTGAGGA AATT TCCCCTCTTTTCCTCTAGTCTCTC CTTTCTTTTGCTGAT cpoA 974298 - 975422 + | glycosyl transferase CpoA SPD_0961 975438 - 976763 + | glycosyl transferase, group 1 SPD_0962 976794 - 976970 + | hypothetical protein SPD_0963 977029 - 977163 + | hypothetical protein TERM 1193 977185 - 977204 + F 71 -3.4 -5.0538 | opp_overlap 977184, overlap 977186 TTCAAGAAAATTTAG TGACTGGG ATTT CCCAGCCC TTTTTTAAAGTGAGA obgE 977227 - 978537 + | GTPase ObgE SPD_0965 978547 - 978705 + | hypothetical protein TERM 1194 978766 - 978788 + F 100 -13.6 -5.27779 | opp_overlap 978770 GTCAGCTAAGCTCGA GAAAGGACAA ATT TTGTCCTTTC TTTTTTGATATTCAG TERM 1195 978784 - 978770 - f 79 -8.6 -3.89614 | opp_overlap 978766 GCTAAGCTCGAGAAA GGACAA ATT TTGTCC TTTCTTTTTTGATAT TERM 1196 979127 - 979154 + F 71 -7.8 -3.59738 | opp_overlap 979126 979127 979129, overlap 979131 AATGCATACGAAAAG TAGGGCGATAAA AACG TTTATCGCTCAA TTTACGACTATCCTG TERM 1197 979152 - 979129 - f 70 -8.2 -3.16202 | opp_overlap 979127 979131, overlap 979127 979126 TGCATACGAAAAGTA GGGCGATAAA AACG TTTATCGCTC AATTTACGACTATCC TERM 1198 979131 - 979150 + F 72 -9.4 -2.64981 | opp_overlap 979129 979127 979126, overlap 979127 CATACGAAAAGTAGG GCGATAAA AACG TTTATCGC TCAATTTACGACTAT TERM 1199 979325 - 979339 + F 77 -8.6 -3.57263 | opp_overlap 979325 CATTCGGGAGTGAAA CAGTCT GGG AGACTG TTTCAGCCTGAGCCT TERM 1200 979339 - 979325 - f 77 -8.6 -3.6502 | opp_overlap 979325 CATTCGGGAGTGAAA CAGTCT GGG AGACTG TTTCAGCCTGAGCCT TERM 1201 980183 - 980130 - f 100 -17.1 -4.96848 | opp_overlap 980142, overlap 980132 TTTTCTACACAAAAA TAGGCTCCATAATATCTATAGTGGA TTTA CCCACTACAAATATTATAGAGCCAA AAATCCCGTGCCACA TERM 1202 980181 - 980132 - f 100 -19.7 -4.11141 | opp_overlap 980142, overlap 980130 TTCTACACAAAAATA GGCTCCATAATATCTATAGTGGA TTTA CCCACTACAAATATTATAGAGCC AAAAATCCCGTGCCA TERM 1203 980210 - 980187 - f 80 -6.7 -4.72846 | opp_overlap 980187 TTATAGAGCCAAAAA TCCCGTGCC ACATCA AACACGGGA TTTTGTGGTACGACG TERM 1204 980187 - 980210 + F 71 -5.3 -4.46212 | opp_overlap 980187 TTATAGAGCCAAAAA TCCCGTG CCACATCAAA CACGGGA TTTTGTGGTACGACG TERM 1205 980538 - 980521 - f 75 -7 -4.26903 | opp_overlap 980521 GGTAGTGGATTAAAA CGGTCT GGGGAT AGACCG TTTTAAGTCTGACGC TERM 1206 980521 - 980538 + F 78 -7.7 -4.2349 | opp_overlap 980521 GGTAGTGGATTAAAA CGGTCTG GGGA TAGACCG TTTTAAGTCTGACGC TERM 1207 981143 - 981125 - f 78 -10.4 -2.61383 | overlap 981124 AGTTCCATCTACAAC CTCAAAAC AGT GTTTTGAG CAACCTGCGGCTAGT murA-1 981327 - 982586 + | UDP-N-acetylglucosamine 1-carboxyvinyltransferase SPD_0968 982602 - 983153 + | acetyltransferase, GNAT family protein SPD_0969 983146 - 984423 + | hypothetical protein map 984439 - 985299 + | methionine aminopeptidase SPD_0971 985680 - 986078 + | IS1381, transposase OrfA TERM 1208 986424 - 986382 - g 85 -7.2 -4.98531 | overlap 986376 986416 TTGCCAAAGTAAAAA CGTTTAAAATGTTTTCAACA ACC TATCGAAATCATCGTAAACG CTTCGGATTACGAAT SPD_0972 986093 - 986482 + | IS1381, transposase OrfB TERM 1209 987703 - 987715 + G 71 -6.3 -4.23007 | opp_overlap 987702 GTCGCAGTCAAAACT TCCTT CAT AAGGA TTTTGCAGTTCTCTA pcrA 986673 - 988964 + | ATP-dependent DNA helicase PcrA TERM 1210 988972 - 989001 + F 81 -5.8 -4.9792 | AAATCTAATTTTCCA TCCTTCTCAC GAATAATAAA GTGAGGAGGA TTTTTATGTACAGTA TERM 1211 989384 - 989373 - g 73 -2.2 -5.26316 | overlap 989376 TTAGGGGATAAAAAA CAAG AGCA CCTG GTGGCACTCTATCTC TERM 1212 989393 - 989376 - g 75 -5.5 -4.72201 | overlap 989373 GGGGATAAAAAACAA GAGCACC TGGT GGCACTC TATCTCAATACTCAA radC 989007 - 989687 + | DNA repair protein RadC SPD_0974 990373 - 989684 - | class I glutamine amidotransferase, putative TERM 1213 990306 - 990333 + g 93 -7 -5.40004 | CCTTTTGCTGCGTAG CTCATCATGATG TCAT CATCTGGATGAG TTTTTTCGTTTCCTG SPD_0976 991032 - 990391 - | redox-sensing transcriptional repressor Rex TERM 1214 991103 - 991118 + r 72 -6.2 -4.34402 | opp_overlap 991103 AAAAATAAGAAAAAA CTAAGA AAAA TCTTAG TTTTGATGTAAAAAA TERM 1215 991118 - 991103 - R 93 -6.2 -5.80727 | opp_overlap 991103 AAAAATAAGAAAAAA CTAAGA AAAA TCTTAG TTTTGATGTAAAAAA SPD_0977 991366 - 991115 - | hypothetical protein TERM 1216 991270 - 991256 - GR 73 -8.6 -3.32997 | TCCTGACAAAGTCAA CATGAG AGC CTCATG ATCCTCATACTTGAG SPD_0978 991685 - 991338 - | hypothetical protein SPD_0979 992805 - 991690 - | aminotransferase, class V TERM 1217 991995 - 992009 + g 73 -7.1 -4.07786 | opp_overlap 991983 GAATGCCCTCCAGCT CTGCC AGAAA GGCAG TTTCTAGATTTTGTA prs2 993774 - 992815 - | ribose-phosphate pyrophosphokinase SPD_0981 994456 - 993887 - | hypothetical protein SPD_0982 994584 - 995255 + | pyrophosphokinase family protein ppnK 995239 - 996057 + | inorganic polyphosphate/ATP-NAD kinase SPD_0984 996054 - 996950 + | ribosomal large subunit pseudouridine synthase, RluD subfamily protein eutD 996994 - 997968 + | phosphotransacetylase TERM 1218 998085 - 998075 - T 71 -5.4 -4.57073 | GATTGGTGTCAAAAA GGAA AAC TTCC AAGCGATGATATCCT TERM 1219 998240 - 998262 + T 100 -13.6 -5.27779 | opp_overlap 998244 AAAAGCTAAGCTCGA GAAAGGACAA ATT TTGTCCTTTC TTTTTTGATATTCAG TERM 1220 998258 - 998244 - T 79 -8.6 -3.89614 | opp_overlap 998240 GCTAAGCTCGAGAAA GGACAA ATT TTGTCC TTTCTTTTTTGATAT TERM 1221 998828 - 998814 - T 77 -8.6 -3.6502 | opp_overlap 998814 CATTCGGGAGTGAAA CAGTCT GGG AGACTG TTTCAGCCTGAGCCT TERM 1222 998814 - 998828 + T 77 -8.6 -3.57263 | opp_overlap 998814 CATTCGGGAGTGAAA CAGTCT GGG AGACTG TTTCAGCCTGAGCCT TERM 1223 999672 - 999620 - T 93 -8.8 -4.77165 | gap 1, opp_overlap 999589 999584 999621 999622, overlap 999622 TTTTCTACAATAAAA TAGGCTCCATAATATCTATAGTGGA TTTA CCCACTACAAATATTATAGAGTC-A TTTTTGCACCTTTCT TERM 1224 999621 - 999672 + T 74 -5.3 -4.6526 | opp_overlap 999620 999622, overlap 999589 999584 999622 TTTCTACAATAAAAT AGGCTCCATAATATCTATAGTGG ATTTAC CCACTACAAATATTATAGAGTCA TTTTTGCACCTTTCT TERM 1225 999622 - 999671 + T 75 -8.8 -3.38071 | opp_overlap 999622 999620, overlap 999589 999584 999621 TTCTACAATAAAATA GGCTCCATAATATCTATAGTGG ATTTAC CCACTACAAATATTATAGAGTC ATTTTTGCACCTTTC TERM 1226 999671 - 999622 - T 100 -13.9 -4.00512 | opp_overlap 999589 999584 999621 999622, overlap 999620 TTCTACAATAAAATA GGCTCCATAATATCTATAGTGGA TTTA CCCACTACAAATATTATAGAGTC ATTTTTGCACCTTTC SPD_0987 1000028 - 999729 - | hypothetical protein SPD_0988 1000430 - 1001134 + | hypothetical protein rplU 1001316 - 1001630 + | 50S ribosomal protein L21 SPD_0990 1001646 - 1001990 + | hypothetical protein rpmA 1002007 - 1002300 + | 50S ribosomal protein L27 TERM 1227 1002316 - 1002304 - T 93 -7.7 -5.46706 | opp_overlap 1002304 ATCGCAAAATAAAAA GGTTC ATT GAACC TTTTATCCCGAACCT TERM 1228 1002304 - 1002316 + T 81 -7.7 -4.37092 | opp_overlap 1002304 ATCGCAAAATAAAAA GGTTC ATT GAACC TTTTATCCCGAACCT TERM 1229 1002371 - 1002398 + T 100 -10.6 -6.11229 | opp_overlap 1002363 1002370 1002373, overlap 1002373 GAAACAGCTTAAAAT AAGGCTTTCCGA GTTT TCGGAGAGCCTG TTTTTTTATTTTGAT TERM 1230 1002373 - 1002396 + T 100 -13.2 -4.67109 | opp_overlap 1002370 1002373, overlap 1002371 AACAGCTTAAAATAA GGCTTTCCGA GTTT TCGGAGAGCC TGTTTTTTTATTTTG TERM 1231 1002396 - 1002373 - T 100 -11 -4.2142 | opp_overlap 1002373 1002371, overlap 1002370 AACAGCTTAAAATAA GGCTTTCCGA GTTT TCGGAGAGCC TGTTTTTTTATTTTG SPD_0992 1002816 - 1002646 - | hypothetical protein SPD_0993 1002916 - 1002788 - | hypothetical protein TERM 1232 1003293 - 1003279 - g 75 -2.8 -5.252 | TATTCCTATAAAAAA CCAAAA AGA TATTGG CACACCATCTGATTC ribF 1003253 - 1004170 + | bifunctional riboflavin kinase/FMN adenylyltransferase TERM 1233 1004241 - 1004259 + T 77 -3.1 -5.51353 | opp_overlap 1004200, overlap 1004201 TTTAGTCTAACTTTT GAGGTCA CGACA TTACCTC TTTTTATTCTTTTTC SPD_0995 1005111 - 1004263 - | hypothetical protein TERM 1234 1005178 - 1005188 + H 90 -4 -5.90981 | GATTGACTCCATTAG GATT TTT AATC TTTTTTTTGATATAA SPD_0996 1005253 - 1006092 + | DegV family protein hup 1006198 - 1006473 + | DNA-binding protein HU TERM 1235 1006489 - 1006523 + F 100 -9.5 -5.32944 | gap 1, opp_overlap 1006489 TCAGTCTTTAAAAAG CCTATTGTATCAAGCT TTCT AGCTTGGT-CAGTAGG TTTTTTAATTATGAA TERM 1236 1008058 - 1008047 - g 78 -7.2 -4.48221 | opp_overlap 1008047 TATCAAGGGAGAAAA GCGC TTTG GCGC TAATGTTGAGGTTGG SPD_0998 1006899 - 1008800 + | ABC transporter, ATP-binding protein SPD_0999 1008803 - 1009666 + | transcriptional regulator MutR, putative TERM 1237 1009739 - 1009695 - f 78 -2.2 -5.75538 | gap 1, opp_overlap 1009695 GGGAAAAAATAAAAA GCTCCTTTC-GGTTTTGATAC AATA GTTTCAAAATTTGAGAGGAGC TTTAATATGAATCGC TERM 1238 1009695 - 1009739 + F 79 -8.8 -3.84825 | gap 1, opp_overlap 1009695 GGGAAAAAATAAAAA GCTCCTTTC-GGTTTTGATAC AATA GTTTCAAAATTTGAGAGGAGC TTTAATATGAATCGC TERM 1239 1010596 - 1010613 + G 71 -4.1 -4.91511 | TTTTGATTTTACTGG CTTTGAC AGGT GTCGGAG TTTTTATGATGGGAT SPD_1000 1009746 - 1010924 + | transporter, major facilitator family protein TERM 1240 1010970 - 1010993 + F 100 -11 -4.35042 | overlap 1010968 CTAAGTGTTTTTTCC GCCCTTCTCG TTTG TGAGGAGGGC TTGTTTTATGGTAAA TERM 1241 1011050 - 1011070 + G 70 -9.7 -2.62263 | GAGTTAGTCGCTTTG CTCAATCGC TAT GCGACTGAG TACTATACCAGCGAT TERM 1242 1011715 - 1011729 + G 70 -5.7 -4.4767 | opp_overlap 1011715 AAAGGGTTTGAAGTA CCTAG AACAA CTAGG TTTTGTGGTCAATCC ligA 1011017 - 1012975 + | NAD-dependent DNA ligase LigA TERM 1243 1014608 - 1014618 + G 73 -5.4 -4.49556 | AATGCCTACCAGATG CCAA ATA TTGG TTTCTTTAATGACAA pulA 1013087 - 1015366 + | pullulanase, type I TERM 1244 1015514 - 1015552 + T 100 -17.1 -5.18726 | gap 1, opp_overlap 1015514, overlap 1015550 ATTTTCACGAAACAA GACCTCCTATCAAA-GTT TTTG AACATTTGATAGGAGGTC TTTTTATTATGAAGA TERM 1245 1015552 - 1015514 - T 100 -17.1 -4.0031 | gap 1, opp_overlap 1015514 1015550 ATTTTCACGAAACAA GACCTCCTATCAAA-GTT TTTG AACATTTGATAGGAGGTC TTTTTATTATGAAGA SPD_1003 1015891 - 1015718 - | hypothetical protein TERM 1246 1016180 - 1016151 - g 73 -2.3 -5.32944 | gap 1 GCGATAAGGAAAAAA TTGGTACTATCCTT GCC AAAGA-AGTAGCAA AAGGGATTAAAGCAG TERM 1247 1016951 - 1016939 - g 76 -3.3 -5.20333 | GATGCACAAGAAAAA GAGGC TCA GGCTC TTACACCAATCAAAC gapN 1015910 - 1017334 + | glyceraldehyde-3-phosphate dehydrogenase, NADP-dependent TERM 1248 1017339 - 1017368 + F 100 -11.7 -5.58454 | opp_overlap 1017344 1017345 1017347, overlap 1017366 ATGTGAAATAACGTG TAAAATCAGGAAA TTGT TTTCCTGGTTTTA TTTTTTTGCTATAAA TERM 1249 1017362 - 1017345 - f 71 -8.5 -3.09429 | opp_overlap 1017339, overlap 1017344 1017347 AATAACGTGTAAAAT CAGGAAA TTGT TTTCCTG GTTTTATTTTTTTGC glgB 1017799 - 1019727 + | glycogen branching enzyme glgC 1019717 - 1020859 + | glucose-1-phosphate adenylyltransferase glgD 1020849 - 1021988 + | glucose-1-phosphate adenylyltransferase, GlgD subunit glgA 1021985 - 1023418 + | glycogen synthase TERM 1250 1023453 - 1023423 - f 73 -8.5 -3.19081 | opp_overlap 1023428, overlap 1023428 TAGTTAATTAATAGA TAAAATCGTATGA TGACT TCATACGATTTTT AGGCTGTTTAGAGAG TERM 1251 1023428 - 1023448 + F 86 -8.4 -4.6856 | opp_overlap 1023428 1023423 AATTAATAGATAAAA TCGTATGA TGACT TCATACGA TTTTTAGGCTGTTTA TERM 1252 1023448 - 1023428 - f 86 -8.4 -4.70453 | opp_overlap 1023428, overlap 1023423 AATTAATAGATAAAA TCGTATGA TGACT TCATACGA TTTTTAGGCTGTTTA TERM 1253 1023959 - 1023946 - f 74 -5.3 -4.74219 | AGAAAGAAACTAAAA CTTTC TAAA GAAAG AAGGGTGGCAATCGG TERM 1254 1025061 - 1025044 - g 82 -7.7 -4.57073 | opp_overlap 1025044 TAGGTGTTGCAAAAA GAACCCC TGTT GGAGTTC CTGTTATTGCTATTT SPD_1011 1024131 - 1025246 + | glycerate kinase SPD_1010 1025689 - 1025243 - | hypothetical protein TERM 1255 1026071 - 1026051 - g 74 -4.7 -4.96848 | overlap 1026068 CTTGGTACACAAAAA GCTGTTGAC AAC GTAAACAAC ATCATTGCTGAAGCT eno 1025853 - 1027157 + | phosphopyruvate hydratase TERM 1256 1027179 - 1027155 - T 100 -11.7 -5.11033 | opp_overlap 1027160, overlap 1027160 TACAACCTTAAAAAA TAAAATAGTTC AGT GAACTATTTTA TCCCGAACCATGAAA TERM 1257 1027160 - 1027174 + T 78 -7.2 -4.36914 | opp_overlap 1027155 1027160 CCTTAAAAAATAAAA TAGTTC AGT GAACTA TTTTATCCCGAACCA TERM 1258 1027174 - 1027160 - T 93 -7.2 -5.42198 | opp_overlap 1027160, overlap 1027155 CCTTAAAAAATAAAA TAGTTC AGT GAACTA TTTTATCCCGAACCA TERM 1259 1027229 - 1027257 + T 100 -16.1 -5.19879 | opp_overlap 1027223 ATTTAACAACGTTTC TAGCCCCTCGGAT TTT ATCCGAAGGGCTA TTTTTGTATTTAGAG SPD_1013 1027741 - 1027295 - | integrase/recombinase, phage integrase family protein TERM 1260 1027670 - 1027710 + g 72 -9.3 -3.30658 | gap 1, opp_overlap 1027670 1027680, overlap 1027680 AGCAGGATAAAAAAG CCTCGTAAAAGGTATTGC AACTTG GTAATACCTTTT-TGAGG TGCTTTTTGATATGA TERM 1261 1027680 - 1027701 + g 71 -5.2 -4.652 | opp_overlap 1027670 1027680, overlap 1027670 AAAAGCCTCGTAAAA GGTATTGC AACTTG GTAATACC TTTTTGAGGTGCTTT SPD_1014 1028488 - 1028138 - | IS630-Spn1, transposase Orf1 TERM 1262 1028436 - 1028458 + g 72 -3.4 -5.0133 | TCTGTTATACTACCT GTTCGCTC ACAATAA GAGAGAAC TTTTTTACGAAAATC TERM 1263 1028822 - 1028837 + H 89 -6.8 -5.60689 | opp_overlap 1028822 ATCATAAAACTCAAA GCCTTG TTAC CGAGGC TTTTTTATTATGTGA TERM 1264 1029145 - 1029173 + G 74 -6 -4.47888 | gap 1, opp_overlap 1029139 TTTGAAAAGGAACGC GCCGTGCTGGAAT ACTT GTCCCAGCA-GGC TTCTTTTTCGATTAC TERM 1265 1030880 - 1030893 + G 71 -6.7 -4.03219 | TTTCCTTGGTCAATT CTGCT CGTA AGCAG TTGTTCTTGTCGGCT TERM 1266 1030905 - 1030915 + G 79 -6.8 -4.57073 | GCAGTTGTTCTTGTC GGCT CCA AGCC TTTTTAACGAAAGTG TERM 1267 1032261 - 1032241 - g 72 -4.7 -4.82901 | overlap 1032242 CTGGTCGGAGAAAAA CTCAAGCAA GCT TGGCTTGAA AAAATAAGAGAGGAG rexB 1028989 - 1032288 + | ATP-dependent exonuclease RexB TERM 1268 1032339 - 1032327 - g 74 -4.8 -4.7173 | GAGGAGATTCAAAAA CTGC AAGAA GCAG AAGCAAATTCGAGCA TERM 1269 1032380 - 1032370 - g 70 -3.2 -4.91285 | AGGAACAGAAGAAAA CTGC CGA GCAA ATCGAAGCTATCTAC TERM 1270 1033302 - 1033280 - g 73 -7 -4.24534 | overlap 1033282 CAACGAAGAGAGAAA GACCCAGTTT GCT AAACTAGGAC AATTATCAGACCAGA TERM 1271 1033300 - 1033282 - g 70 -8.2 -3.70645 | overlap 1033280 ACGAAGAGAGAAAGA CCCAGTTT GCT AAACTAGG ACAATTATCAGACCA TERM 1272 1033826 - 1033839 + G 79 -6.7 -4.59773 | opp_overlap 1033826 AATCAACTATGATAA CAAGC ACCA GCTTG TTTTTGCCAATACCA rexA 1032285 - 1035935 + | exonuclease RexA TERM 1273 1036041 - 1036023 - f 78 -10.4 -2.61383 | opp_overlap 1036022, overlap 1036022 AGTTCTATCCACAAC CTCAAAAC AGT GTTTTGAG CTGATTGCGGCTAGC TERM 1274 1036129 - 1036141 + G 75 -7.7 -4.11484 | opp_overlap 1036128 CCAGTTAGAAAATCC CTGCA CGA TGCAG TTTTACAGGCTTCGA SPD_1017 1036105 - 1037283 + | hypothetical protein TERM 1275 1037285 - 1037319 + F 100 -15.2 -3.28924 | opp_overlap 1037288, overlap 1037288 GATTAGTGATATGAG TAACACCTACCGTGTA AAT TTCATGGTAGGTGTTA TTGTACCCCCAAATA TERM 1276 1037288 - 1037316 + F 95 -12.5 -3.78934 | opp_overlap 1037288, overlap 1037285 TAGTGATATGAGTAA CACCTACCGTGTA AAT TTCATGGTAGGTG TTATTGTACCCCCAA TERM 1277 1037316 - 1037288 - f 83 -10.3 -3.25223 | opp_overlap 1037288 1037285 TAGTGATATGAGTAA CACCTACCGTGTA AAT TTCATGGTAGGTG TTATTGTACCCCCAA TERM 1278 1038366 - 1038352 - g 77 -8.6 -3.80604 | overlap 1038360 AGAAACGAAGAAAGA GGAGAA GAT TTCTCC AAAAGAAAAGACTGG TERM 1279 1038697 - 1038672 - g 90 -4.8 -5.54894 | overlap 1038692 AAGGTACTAAAAAAA CTCAAGTTAT AAAGGA ACAACCTGAG ACTGGTGTAGAACAT TERM 1280 1039010 - 1038996 - g 73 -2.1 -5.25803 | AAGGTCCAGAAAAAA CTGAA GAAGT TCCAG TAAAACCAACAGAAG TERM 1281 1039745 - 1039728 - g 70 -5.5 -4.40358 | overlap 1039731 1039739 AGTCAGTTTATAAAA TCACAGC CAAA GCTGAGA AACTCCAGCAAGAAC TERM 1282 1043184 - 1043168 - g 74 -6.5 -4.43221 | overlap 1043171 AAAGATCCGACAAAA CCATGGC CAA GCTATGG CACAAAGACTATCAA iga 1037492 - 1043383 + | immunoglobulin A1 protease precursor TERM 1283 1043392 - 1043381 - f 77 -3 -5.55769 | TTTGAGAATAAAAAA TAGT GTTT ACTA TTAGGAAATAAAGTT TERM 1284 1043615 - 1043630 + F 84 -5.4 -5.4251 | opp_overlap 1043615 TGCTCCCTCTGAAAA GTCATC ATTT GATGGC TTTTTTCTATATAGG rbgA 1043842 - 1044693 + | ribosomal biogenesis GTPase TERM 1285 1044727 - 1044707 - g 73 -6.9 -4.22442 | overlap 1044700 1044704 AAAGAAATCAAAGAA CTCCTTG TGACAGT CAAGGAG TTAGAAAGCCCTATT rnhB 1044680 - 1045459 + | ribonuclease HII TERM 1286 1046226 - 1046244 + G 82 -11.8 -3.08867 | TCCTTGGATTTTCAG GCTTTCTC TAT GAGAAAGC TGTATTAAACGTTGG SPD_1021 1045475 - 1047025 + | voltage-gated chloride channel family protein TERM 1287 1047027 - 1047064 + T 100 -10.9 -4.27211 | overlap 1047022 1047028 ATTTGTTGTTGTAGT ATGATCATTTACATAAT TTAT GTTATGTAAATGATCAG TTTGATTTATTTAGA TERM 1288 1047028 - 1047063 + T 95 -14.4 -3.15242 | overlap 1047027 1047022 TTTGTTGTTGTAGTA TGATCATTTACATAAT TTAT GTTATGTAAATGATCA GTTTGATTTATTTAG TERM 1289 1047080 - 1047108 + T 79 -5.4 -5.1861 | gap 1, opp_overlap 1047083, overlap 1047083 TTTGATTTATTTAGA AAACCGATTCTCA GAAA TGAGA-TCGGTTA TTTTTTACTGATGAG TERM 1290 1047083 - 1047105 + T 83 -7.1 -4.68456 | gap 1, opp_overlap 1047083, overlap 1047080 GATTTATTTAGAAAA CCGATTCTCA GAAA TGAGA-TCGG TTATTTTTTACTGAT TERM 1291 1047105 - 1047083 - T 78 -7.1 -4.431 | gap 1, opp_overlap 1047080 1047083 GATTTATTTAGAAAA CCGATTCTCA GAAA TGAGA-TCGG TTATTTTTTACTGAT SPD_1022 1047331 - 1047218 - | hypothetical protein xerS 1047609 - 1048679 + | site-specific tyrosine recombinase XerS TERM 1292 1048720 - 1048743 + T 90 -8.2 -5.04601 | opp_overlap 1048720 TAAATATCAAAAAAA GAAGTTGGTT AGTT GGCCAACTTC TTTTTGATTTATCCA TERM 1293 1048743 - 1048720 - T 89 -6.8 -5.66989 | opp_overlap 1048720 TAAATATCAAAAAAA GAAGTTGG TTAGTTGG CCAACTTC TTTTTGATTTATCCA SPD_1024 1049741 - 1048752 - | lipoate-protein ligase, putative TERM 1294 1049787 - 1049770 - R 71 -6.3 -4.11404 | opp_overlap 1049770 TTTATATGATAGAAA CTGGAAA TAAC CTTCCAG TCTAATCTATCTTCG lpdA 1051490 - 1049805 - | dihydrolipoamide dehydrogenase SPD_1026 1052597 - 1051554 - | dihydrolipoamide acetyltransferase SPD_1027 1053807 - 1052815 - | acetoin dehydrogenase, E1 component, beta subunit, putative acoA 1054791 - 1053823 - | TPP-dependent acetoin dehydrogenase alpha-subunit TERM 1295 1054916 - 1054889 - R 100 -9.2 -5.86976 | opp_overlap 1054889 1054895 1054912 1054914, overlap 1054912 TCACAAAATAAAAAA GAAAACCCCGTG AAAA CAAGGGATTTTC TTGTCAAGAATATTT SPD_1029 1056306 - 1054945 - | MATE efflux family protein TERM 1296 1055921 - 1055909 - G 70 -7.7 -3.7798 | overlap 1055907 GATAAAAACCAAAGA TAGCG AAC CGCTA CTGCCGCTACTGCTG pyrC 1057859 - 1056591 - | dihydroorotase mutX 1058336 - 1057872 - | Mutator mutT protein (7,8-dihydro-8-oxoguanine-triphosphatase) (8-oxo-dGTPase) ung 1058999 - 1058346 - | uracil-DNA glycosylase TERM 1297 1058797 - 1058779 - G 70 -3.1 -4.99035 | overlap 1058780 TCAGGTACAGAAAAA CTCAAGC CCTGC GCTTGAC CTGGTCCGTGATAGG TERM 1298 1059064 - 1059034 - R 76 -9.9 -2.78463 | opp_overlap 1059041, overlap 1059041 ACTGCCTCTATTATA GCAAAAAGTGGCT ATGGA AACCACTTTTTAC AGTTTATCTAAAGAT TERM 1299 1059057 - 1059041 - R 70 -4.4 -4.82667 | opp_overlap 1059041, overlap 1059034 CTATTATAGCAAAAA GTGGCT ATGGA AACCAC TTTTTACAGTTTATC SPD_1033 1059782 - 1059135 - | hypothetical protein SPD_1034 1060509 - 1059796 - | hydrolase, haloacid dehalogenase-like family protein TERM 1300 1060015 - 1060001 - G 73 -10 -2.83403 | overlap 1060000 TTTTCTTTACTAAAT CCAGCA ATT TGCTGG CCAATCTTTTCATAA TERM 1301 1060881 - 1060861 - R 84 -5.4 -5.45802 | CTGTTAAAATAAAAA GGAACTGC ATAAA GCAATCCC TTTCTGATTTTGAAA SPD_1035 1061125 - 1060967 - | hypothetical protein SPD_1036 1061347 - 1061195 - | hypothetical protein TERM 1302 1061463 - 1061476 + r 70 -3.9 -4.8487 | TAACAGACTGGCCGT CAATA ATAG TATTG TTCTTTTTTTCATCA TERM 1303 1061711 - 1061683 - R 90 -4 -5.93809 | gap 1, opp_overlap 1061677 TTTTCATAAAAAAAA TGAGAACTAGAAC TCAC ATTCT-GCTCTCA TTTTTCGTTTTCCCG SPD_1037 1064303 - 1061769 - | histidine triad protein TERM 1304 1064413 - 1064468 + r 76 -3.8 -5.32565 | opp_overlap 1064419 1064428, overlap 1064418 1064419 1064428 CAAGAATTTTACATA TATACATAAT-AAAAATGAAAGCCTC TTTATC GAGACTTTCATTTTTCATTA-GTTTA TTTTTTCCTTACTTA TERM 1305 1064418 - 1064464 + r 77 -4.8 -5.12785 | gap 1, opp_overlap 1064419 1064428, overlap 1064413 1064419 1064428 ATTTTACATATATAC ATAAT-AAAAATGAAAGCCTC TTTATC GAGACTTTCATTTTTCATTAG TTTATTTTTTCCTTA TERM 1306 1064463 - 1064419 - R 80 -10.5 -3.08197 | gap 1, opp_overlap 1064419 1064418 1064413 1064428, overlap 1064428 TTTTACATATATACA TAAT-AAAAATGAAAGCCTC TTTATC GAGACTTTCATTTTTCATTA GTTTATTTTTTCCTT TERM 1307 1064419 - 1064463 + r 73 -8.3 -3.65231 | gap 1, opp_overlap 1064419 1064428, overlap 1064418 1064413 1064428 TTTTACATATATACA TAAT-AAAAATGAAAGCCTC TTTATC GAGACTTTCATTTTTCATTA GTTTATTTTTTCCTT TERM 1308 1064428 - 1064453 + r 81 -6.2 -4.95957 | opp_overlap 1064428 1064419, overlap 1064419 1064418 1064413 TATACATAATAAAAA TGAAAGCCTC TTTATC GAGACTTTCA TTTTTCATTAGTTTA TERM 1309 1064453 - 1064428 - R 90 -8.4 -5.27206 | opp_overlap 1064419 1064418 1064413 1064428, overlap 1064419 TATACATAATAAAAA TGAAAGCCTC TTTATC GAGACTTTCA TTTTTCATTAGTTTA phpA 1066911 - 1064461 - | pneumococcal histidine triad protein A precursor TERM 1310 1065113 - 1065123 + g 89 -5.4 -5.35815 | GCGTCTGGAGATGGA GGTA GGA TACC TTTTTCTTTAGTATA TERM 1311 1067158 - 1067134 - R 100 -12.9 -5.69023 | opp_overlap 1067134 AAAATATCAAAAAAA GTCCCTGTAAC TGA GTTGCAGGGAC TTTTCGATTAATCAA TERM 1312 1067134 - 1067158 + r 100 -15.1 -4.30014 | opp_overlap 1067134 AAAATATCAAAAAAA GTCCCTGTAAC TGA GTTGCAGGGAC TTTTCGATTAATCAA ptsI 1068899 - 1067166 - | phosphoenolpyruvate-protein phosphotransferase TERM 1313 1067632 - 1067657 + g 85 -7 -5.1356 | gap 1, opp_overlap 1067638 ATGTTATCCGCAACT GCAACACCTTC AGCAA GAAGGT-TTGC TTTTTCTTCATCAAA TERM 1314 1068362 - 1068372 + g 71 -4 -4.87786 | opp_overlap 1068362 TGTTGGTTACAAAAG CTTT TAC AAAG TTTTTGTCCAATTGA TERM 1315 1068737 - 1068776 + g 71 -7.2 -3.87597 | gap 1, opp_overlap 1068737, overlap 1068715 CGCGAATAACAGAAA GCTCGTCTTG-TGATGC CTGTAGA GCGGCATCAAGGCGAGC TTCTTCTGCGTTTGT ptsH 1069168 - 1068905 - | phosphocarrier protein HPr nrdH 1069519 - 1069737 + | glutaredoxin-like protein NrdH nrdE 1069818 - 1071977 + | ribonucleotide-diphosphate reductase subunit alpha TERM 1316 1071977 - 1071993 + F 70 -8.1 -3.26042 | overlap 1071976 AAGCTGTGTGATTTA GTTTCTA GCA TAGAAAC ATTATTTTTCCCTAA TERM 1317 1072068 - 1072081 + F 90 -8.1 -4.86001 | opp_overlap 1072068 TGTAACATTTTAAAA GTCGG GCTT CCGAC TTTTTGTGCGATACT TERM 1318 1072081 - 1072068 - f 81 -8.1 -4.1964 | opp_overlap 1072068 TGTAACATTTTAAAA GTCGG GCTT CCGAC TTTTTGTGCGATACT nrdF 1072165 - 1073127 + | ribonucleotide-diphosphate reductase subunit beta TERM 1319 1073192 - 1073221 + F 89 -3.1 -5.77734 | gap 1, opp_overlap 1073192 1073200 ATAACCCAACAAAAA TATCGAAAGTTT TGAAAAC AAAC-TTCGATA TTTTTGTTTTTGTTT TERM 1320 1073221 - 1073192 - f 71 -3.1 -5.14645 | gap 1, opp_overlap 1073192, overlap 1073200 ATAACCCAACAAAAA TATCGAAAGTTT TGAAAAC AAAC-TTCGATA TTTTTGTTTTTGTTT lacR2 1073309 - 1074070 + | lactose phosphotransferase system repressor TERM 1321 1074139 - 1074174 + T 100 -22.2 -5.43487 | opp_overlap 1074139 TTCCCACAATAAAAA GCATAGTATCAGGTGT TTCA ACACCTGATACTATGC TTTTTTCTATGATTT TERM 1322 1074174 - 1074139 - T 100 -22.2 -5.18726 | opp_overlap 1074139 TTCCCACAATAAAAA GCATAGTATCAGGTGT TTCA ACACCTGATACTATGC TTTTTTCTATGATTT SPD_1045 1074525 - 1074340 - | hypothetical protein lacG-2 1075974 - 1074568 - | 6-phospho-beta-galactosidase lacE-2 1077874 - 1076183 - | PTS system, lactose-specific IIBC components lacF-2 1078191 - 1077874 - | PTS system, lactose-specific IIA component lacT 1079063 - 1078227 - | transcription antiterminator LacT TERM 1323 1078450 - 1078461 + g 70 -3 -5.01676 | opp_overlap 1078450 TGAATCATAAAGCGA TCAT AGAA ATGA TTATTTTTTTTGGTT TERM 1324 1079157 - 1079107 - R 100 -12.3 -5.32882 | gap 1 TATGAGTACAAAAAA TGACCACAAATGAACTAGAAAATC AGCT GATTT-CTAATTCACCTGTGATCA TGCCTAATATTACTT lacD 1080277 - 1079297 - | tagatose 1,6-diphosphate aldolase lacC 1081208 - 1080279 - | tagatose-6-phosphate kinase lacB 1081734 - 1081219 - | galactose-6-phosphate isomerase subunit LacB lacA 1082190 - 1081765 - | galactose-6-phosphate isomerase subunit LacA TERM 1325 1082097 - 1082113 + g 87 -6.5 -5.35224 | opp_overlap 1082099, overlap 1082099 GACCTTCAGCTGTAA CATCCAC AAG GTGGAAG TTTTCTTTTTCTAAG SPD_1054 1082692 - 1082348 - | hypothetical protein TERM 1326 1082919 - 1082961 + r 88 -7.2 -4.98531 | overlap 1082906 1082945 ATTCGTAATCCGAAG CGTTTACGATGATTTCGATA GGT TGTTGAAAACATTTTAAACG TTTTTACTTTGGCAA SPD_1057 1083973 - 1083671 - | PTS system, IIB component, putative TERM 1327 1084046 - 1084060 + H 72 -5 -4.76644 | TATAAGCATAAAGTT TTTCTG GTT CGGAAA TTTTTGATAGGTCTT TERM 1328 1084708 - 1084726 + G 72 -10.4 -2.61383 | overlap 1084707 GCTAGCCGCAGGTTA CTCAAAAC ACA GTTTTGAG GTTGTAGATGAAACT TERM 1329 1084752 - 1084740 - g 73 -7.7 -3.83205 | AGGTTGTAGATGAAA CTGAC GAA GTCAG TAACCATACATACAG SPD_1059 1084667 - 1084819 + | hypothetical protein TERM 1330 1084842 - 1084824 - T 82 -4.5 -5.56112 | ATAAAAACTAAAAAA GCAGACC ATCTA AGCCTGC TTTACTATTGATTCT lepA 1086723 - 1084900 - | GTP-binding protein LepA SPD_1061 1087530 - 1086802 - | serine/threonine protein phosphatase TERM 1331 1087033 - 1087053 + g 80 -4.7 -5.35459 | overlap 1087028 1087036 ATTTTCAGCTCCGTG GAATGGTTT TCT AAGCCATAC TTTTTTATAATCTGT recN 1089199 - 1087532 - | DNA repair protein RecN SPD_1063 1089637 - 1089206 - | transcriptional regulator of arginine metabolism expression, putative SPD_1064 1090445 - 1089630 - | hemolysin A, putative TERM 1332 1089678 - 1089705 + g 87 -5 -5.42198 | gap 1, overlap 1089679 TACTGCTTCTTTAAT CTCAGCAAG-AAT CTG ATTGCTTGCTGAC TTTTCTTTTTTCAAA TERM 1333 1089679 - 1089704 + g 77 -8.5 -3.83692 | gap 1, overlap 1089678 ACTGCTTCTTTAATC TCAGCAAG-AAT CTG ATTGCTTGCTGA CTTTTCTTTTTTCAA ispA 1091313 - 1090438 - | geranyltranstransferase xseB 1091522 - 1091310 - | exodeoxyribonuclease VII small subunit TERM 1334 1091346 - 1091361 + g 76 -7.6 -4.1585 | TCCGTCTTCTTGCAT GACCTT GACC AAGGTC TTTTCAGCCTTGTCC TERM 1335 1091452 - 1091476 + g 80 -10.1 -3.70068 | TCCAGAGCAATTTCA CCATTTTCCAA ACT TTGGACAATGG TTTCCAGTTCTGCTA xseA 1092840 - 1091500 - | exodeoxyribonuclease VII large subunit TERM 1336 1092760 - 1092780 + g 71 -7.5 -3.95621 | opp_overlap 1092758 1092760 TTGACCAGTTAAATA GACCCGTTC CAA GTATGGGTC TTTATCGAATTTCAT TERM 1337 1092959 - 1092945 - R 100 -11.4 -5.36364 | GGAAAAATAGAAAAA GGAGGC AAG GCCTCC ACATGTGATTATTTG udk 1093606 - 1092968 - | uridine kinase TERM 1338 1093703 - 1093682 - R 84 -6.6 -5.1861 | CTCATCAGCAAAAAA CACCAGAG TCTTCC CTCTGATG TTCGACAGTTTTAAC SPD_1069 1094016 - 1093714 - | hypothetical protein truB 1095135 - 1094257 - | tRNA pseudouridine synthase B TERM 1339 1095093 - 1095081 - G 73 -5.5 -4.62783 | overlap 1095082 TACGCAGTTTAAAAA CCGCA TCA TGCGA GGTCATTCCTGCTTC SPD_1071 1098421 - 1095236 - | hypothetical protein TERM 1340 1097801 - 1097817 + g 84 -8.1 -4.69664 | ATTTTCAAAATTTTC CCTATTT TTT AAATAGG TTTTTGAATAATCTG SPD_1072 1099707 - 1098433 - | hypothetical protein TERM 1341 1099786 - 1099767 - R 95 -8.6 -5.10154 | opp_overlap 1099767 AGGGAAAATCAAAAA CAGTGAGT CAAA ACCCACTG TTTATCTTCTTTTAC TERM 1342 1099767 - 1099786 + r 74 -6.4 -4.45253 | opp_overlap 1099767 AGGGAAAATCAAAAA CAGTGAGT CAAA ACCCACTG TTTATCTTCTTTTAC SPD_1073 1100918 - 1099803 - | O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase TERM 1343 1100391 - 1100373 - G 71 -6 -4.15222 | overlap 1100377 ACTCTCGTCAACAAA TTGAGGGA ATT TCCCTGAA GCCGTCCAGTCAAAA SPD_1074 1101062 - 1100940 - | hypothetical protein TERM 1344 1101201 - 1101185 - R 95 -8.7 -5.46698 | opp_overlap 1101185 1101183 TTGAAAATGAAAAAA GCACGAC TCA ATCGTGC TCATTTTCTTAATCT TERM 1345 1101185 - 1101201 + r 70 -8 -3.28327 | opp_overlap 1101185, overlap 1101183 TTGAAAATGAAAAAA GCACGA CTCAA TCGTGC TCATTTTCTTAATCT SPD_1075 1102007 - 1101210 - | transporter, FNT family protein, putative TERM 1346 1101461 - 1101449 - G 70 -7.7 -3.75824 | TAGCTGACAACACAA GCCAA AGT TTGGC ACCACCATCTTTGAC TERM 1347 1101699 - 1101709 + g 100 -5.4 -5.75342 | AATCTCAGCTGTTTT TCTC CAA GAGA TTTTTTTTAAGAAAC TERM 1348 1102220 - 1102244 + r 100 -14.5 -4.23674 | opp_overlap 1102220 GAAAATCTTAAAAAA TCAGTGAAATC CAT GATTTCACTGA TTTGTATTAATAAAA TERM 1349 1102244 - 1102220 - R 100 -14.5 -5.15117 | opp_overlap 1102220 GAAAATCTTAAAAAA TCAGTGAAATC CAT GATTTCACTGA TTTGTATTAATAAAA srtA 1102994 - 1102251 - | sortase gyrA 1105462 - 1102994 - | DNA gyrase subunit A ldh 1105656 - 1106642 + | L-lactate dehydrogenase TERM 1350 1106680 - 1106655 - T 80 -10.5 -3.01984 | opp_overlap 1106655, overlap 1106658 TAATTTAACTATAGA CAACTCCTTGA ATCA TCAGGGAGTTG TTTTTTATCTATATG TERM 1351 1106655 - 1106680 + T 100 -12.7 -5.4492 | opp_overlap 1106655 1106658 TAATTTAACTATAGA CAACTCCTTGA ATCA TCAGGGAGTTG TTTTTTATCTATATG SPD_1079 1110282 - 1107028 - | type II restriction endonuclease, putative TERM 1352 1109951 - 1109967 + g 79 -6.7 -4.59853 | opp_overlap 1109951 TGCTGAACAAACTTA TCAAAAA GAT TTTTTGA TTTTTCAGGAGTTCC SPD_1080 1112318 - 1110447 - | type II restriction endonuclease, putative TERM 1353 1110960 - 1110946 - G 70 -2.8 -5.07652 | opp_overlap 1110947, overlap 1110947 TTTTTGAAAACAAAA TCTAAC TGA GTTAGT GATTTCGAAACAATT TERM 1354 1111571 - 1111593 + g 70 -3.4 -4.90778 | opp_overlap 1111572 1111576, overlap 1111572 CTAGCTCATCCGCAA ACAAACTCAA TTG TTGAGATTGC TTTTGTTTAGCTGAA TERM 1355 1111588 - 1111576 - G 74 -6.3 -4.42806 | opp_overlap 1111572 1111571, overlap 1111572 TCATCCGCAAACAAA CTCAA TTG TTGAG ATTGCTTTTGTTTAG TERM 1356 1111772 - 1111760 - G 75 -7.7 -4.09685 | opp_overlap 1111760, overlap 1111763 TCTCACGCGCCAAAA GGAGA GAA TCTCC TTGATACTCATAACC SPD_1081 1112647 - 1112393 - | hypothetical protein SPD_1082 1112951 - 1112649 - | hypothetical protein TERM 1357 1112978 - 1112960 - R 71 -3.1 -5.10767 | opp_overlap 1112952, overlap 1112954 1112952 CAGTCAATATAAAAA GAACACC TTCTC AGCGTTC TTTCTATATCTCTGT vicX 1113791 - 1112982 - | vicX protein TERM 1358 1113442 - 1113454 + g 71 -6.3 -4.17089 | TCGATGTCGATATCT CCAAA GGT TTTGG TTTTACCCATTTCAA SPD_1084 1115142 - 1113793 - | sensory box sensor histidine kinase SPD_1085 1115839 - 1115135 - | DNA-binding response regulator mutY 1117069 - 1115894 - | A/G-specific adenine glycosylase TERM 1359 1116515 - 1116495 - G 71 -6.1 -4.25848 | opp_overlap 1116498, overlap 1116498 AAGGCTTGATTAAAA TCACCCGGA CGA TCCGGATTA ATCAAGATCTCCATC TERM 1360 1117207 - 1117225 + r 78 -10.4 -2.61383 | overlap 1117206 GCTAGCCGCAGGTTG CTCAAAAC ACT GTTTTGAG GTTGTGGATAGAACT TERM 1361 1117376 - 1117350 - R 95 -8.8 -5.252 | opp_overlap 1117353 CAGTCTGAGAAAAAA TGAGCTTGGATA TTA TTTCCAAACTCA CTTAAAGTCAATTTC fhs 1119068 - 1117398 - | formate--tetrahydrofolate ligase TERM 1362 1119467 - 1119445 - g 71 -4.9 -4.51097 | gap 1, overlap 1119446 1119448 TTAATTACGACAAAA CGAG-CTCTG AAGC CAGAGCCTCA TCCTAACCTAAGTAT TERM 1363 1119463 - 1119448 - g 70 -9 -3.2043 | overlap 1119446 1119445 ATTACGACAAAACGA GCTCTG AAGC CAGAGC CTCATCCTAACCTAA coaB 1119298 - 1119987 + | phosphopantothenate--cysteine ligase coaC 1119999 - 1120550 + | phosphopantothenoylcysteine decarboxylase SPD_1090 1120534 - 1121097 + | hypothetical protein TERM 1364 1121134 - 1121101 - f 86 -5.3 -5.75538 | opp_overlap 1121104, overlap 1121104 TTGAAAAAATAAAAA CAATCTCCGCTTTCA AACC TGAAGGTGGAGATTT TGCTCTATACAGTTT TERM 1365 1121131 - 1121104 - f 88 -7 -4.8855 | opp_overlap 1121104, overlap 1121101 AAAAAATAAAAACAA TCTCCGCTTTCA AACC TGAAGGTGGAGA TTTTGCTCTATACAG TERM 1366 1121104 - 1121131 + F 100 -11.4 -4.39166 | opp_overlap 1121101 1121104 AAAAAATAAAAACAA TCTCCGCTTTCA AACC TGAAGGTGGAGA TTTTGCTCTATACAG TERM 1367 1121562 - 1121572 + G 73 -5.4 -4.49644 | GCAGTTTTTGTCATC CTAG CCT CTAG TTTTGGATTTTTGAT SPD_1091 1121379 - 1121906 + | hypothetical protein TERM 1368 1122403 - 1122374 - g 84 -10 -3.84017 | opp_overlap 1122377, overlap 1122377 GAAGCCGAAACACAA CAAGACCTCCAC TATATC GAGGAGGCCTTG GATCAGCTAGGTTAT SPD_1093 1121918 - 1122433 + | transcriptional regulator, biotin repressor family protein SPD_1092 1122897 - 1122430 - | MutT/nudix family protein TERM 1369 1122532 - 1122558 + g 79 -6.6 -4.56597 | opp_overlap 1122532 TGGTAGCATATCATA GGCCAGATTTAA GTT TGGAATCTGGTC TTTTTGCACCCAAGA SPD_1094 1123459 - 1122971 - | acetyltransferase, GNAT family protein SPD_1095 1123988 - 1123425 - | hypothetical protein uvrB 1125986 - 1123998 - | excinuclease ABC subunit B SPD_1097 1127016 - 1126063 - | hypothetical protein TERM 1370 1127128 - 1127098 - H 76 -7.8 -3.91947 | opp_overlap 1127097 1127098 AAAAGGAAAAATCAA TGTTATATTTTCTG ACA CGAAAAATATAACA ATTTGCCTTTTTTTA SPD_1098 1127189 - 1129354 + | amino acid ABC transporter, amino acid-binding protein/permease protein TERM 1371 1129391 - 1129370 - g 74 -3.9 -5.0925 | gap 1, overlap 1129374 TGGCAAAATTAAAAA TTGATGTAAA TGA TTTACA-CAA GCACTATGGAAAAAA TERM 1372 1129582 - 1129571 - g 76 -4.4 -5.16572 | ATTTAACTGAAAAAA CAAC CAAT GTTG ACCACGTCCGTGAAA SPD_1099 1129354 - 1130094 + | amino acid ABC transporter, ATP-binding protein TERM 1373 1130102 - 1130121 + F 95 -8.6 -4.88736 | opp_overlap 1130102 ACGTCTAAACTCAAA CTGTAAGG ATTT CCTTGCAG TTTTTCTACCTCGTA TERM 1374 1130199 - 1130187 - f 73 -7.7 -3.76759 | ATTAAGTTTATGAAA TGAGG TTT CCTCA TACCTAGCAAGACTA zwf 1130243 - 1131730 + | glucose-6-phosphate 1-dehydrogenase TERM 1375 1131764 - 1131736 - T 89 -3.1 -5.88565 | opp_overlap 1131738, overlap 1131737 1131738 CTTAGAATAAAAAAA TTTCCTGCAAG TTTATGC CTTGCAGGATT TTTGCTTCTGATTAG TERM 1376 1131763 - 1131737 - T 71 -6.6 -4.11512 | opp_overlap 1131738, overlap 1131736 1131738 TTAGAATAAAAAAAT TTCCTGCAAG TTTATGC CTTGCAGGAT TTTTGCTTCTGATTA TERM 1377 1131762 - 1131738 - T 77 -10.1 -3.05281 | opp_overlap 1131738, overlap 1131737 1131736 TAGAATAAAAAAATT TCCTGCAAG TTTATGC CTTGCAGGA TTTTTGCTTCTGATT TERM 1378 1131738 - 1131762 + T 100 -10.1 -4.95876 | opp_overlap 1131737 1131736 1131738 TAGAATAAAAAAATT TCCTGCAAG TTTATGC CTTGCAGGA TTTTTGCTTCTGATT ftsY 1133053 - 1131776 - | signal recognition particle-docking protein FtsY TERM 1379 1132188 - 1132198 + g 79 -6.8 -4.62336 | overlap 1132189 TCAAAGACCACGCTG GCTG GAT CAGC TTTTTCAGGTCCAGT SPD_1102 1133875 - 1133057 - | Cof family protein SPD_1103 1134669 - 1133875 - | Cof family protein smc 1138205 - 1134666 - | chromosome segregation protein SMC TERM 1380 1136138 - 1136155 + g 71 -4.1 -5.00267 | overlap 1136147 CTTCTGAACCCAAGC TTGCTTC ATCT GCAGCAA TTTCTTTTTGTAATT rnc 1138894 - 1138196 - | ribonuclease III TERM 1381 1139059 - 1139046 - R 85 -4.5 -5.73978 | opp_overlap 1139046 AGGATAAAGAAAAAA GCCCT ATTA AAGGC TTTTTAGGATGTTTA guaC 1140198 - 1139212 - | guanosine 5'-monophosphate oxidoreductase TERM 1382 1140390 - 1140360 - R 72 -2.6 -5.26119 | gap 1, opp_overlap 1140364, overlap 1140364 1140366 GTGTTAAAAATAAAA GAAAGAGGGGAAA TTATTT TCTCCCCACTT-C TTCATCAATAATCGC TERM 1383 1140385 - 1140364 - R 77 -5.1 -5.098 | opp_overlap 1140364, overlap 1140360 1140366 TAAAAATAAAAGAAA GAGGGGAAA TTAT TTTCTCCCC ACTTCTTCATCAATA SPD_1108 1141689 - 1140373 - | hypothetical protein SPD_1109 1143607 - 1141676 - | endonuclease, putative TERM 1384 1142591 - 1142604 + g 70 -3.1 -4.84353 | overlap 1142592 AAAATTATCTTGTCC TCCAA TCAA TTGGG TTTCTTTTGCTTTCT TERM 1385 1143758 - 1143720 - R 88 -7.5 -4.91429 | opp_overlap 1143720 AAATTCTAAACAAAA GCCCAGTGTTAGGAGCT TTAAT ATCTCATAACACTAGAC TTCTTCTCTATCCTA SPD_1110 1143932 - 1143771 - | hypothetical protein SPD_1111 1144095 - 1143922 - | hypothetical protein SPD_1112 1144338 - 1144195 - | hypothetical protein SPD_1113 1144916 - 1144557 - | 3-isopropylmalate dehydratase small subunit, putative TERM 1386 1144794 - 1144806 + g 70 -7.7 -3.75598 | opp_overlap 1144793 TCTAGGCTGAACGAT TGGCA ACA TGCCA TTATTGAGTTCATTA SPD_1114 1145014 - 1145127 + | hypothetical protein leuB 1146223 - 1145186 - | 3-isopropylmalate dehydrogenase SPD_1117 1148004 - 1147348 - | hypothetical protein TERM 1387 1148014 - 1148033 + r 70 -7.2 -3.76387 | gap 1, opp_overlap 1148014 AAACATAAGTGAAAA CTGCTA-CC CAA GGCTAGCAG TTCCTTTCTATTTTT TERM 1388 1148033 - 1148014 - R 78 -7.2 -4.36778 | gap 1, opp_overlap 1148014 AAACATAAGTGAAAA CTGCTA-CC CAA GGCTAGCAG TTCCTTTCTATTTTT cutC 1148680 - 1148048 - | copper homeostasis protein CutC TERM 1389 1148252 - 1148268 + g 70 -9.5 -2.55253 | ACGAGTGACACCGGC TTGACTG AGC CAGTCAA TAGCTTCCGGTTGAT SPD_1119 1149132 - 1148773 - | hypothetical protein TERM 1390 1149232 - 1149206 - R 89 -8.7 -4.41895 | opp_overlap 1149203 1149206 AAGTTCTAACCAAAA GGAGCCTGAAA TTTAC TTTCGGGCCCC TCCTCTTATTTAATC topA 1151325 - 1149238 - | DNA topoisomerase I TERM 1391 1150614 - 1150588 - G 77 -8 -4.19817 | opp_overlap 1150588 1150607, overlap 1150609 CTGATCTACTGAAAA GTCTTTACTCGT CAG ACGAGACAAGAC TTCCTTGACTTCGTT TERM 1392 1151431 - 1151416 - R 75 -4.8 -4.92791 | TATAATAGAAGAAAA GTTTTA TACT TAAAAC CTCAGTCTTCCTTTG SPD_1121 1152535 - 1151492 - | hypothetical protein TERM 1393 1153159 - 1153179 + r 72 -8.3 -3.35996 | overlap 1153160 AGCTAGCCACAGGTT GCTCAAAGC ACT GCTTTGAGG TTGTAGATAAGACTG TERM 1394 1153160 - 1153178 + r 84 -11.8 -2.61383 | overlap 1153159 GCTAGCCACAGGTTG CTCAAAGC ACT GCTTTGAG GTTGTAGATAAGACT TERM 1395 1153310 - 1153356 + r 91 -12.6 -3.33315 | opp_overlap 1153315, overlap 1153315 ACTAATCCACTTAGA AAAAACGCATATTATCAAGTGT TAA AAACTTGCTAATATGCGTTTTA TTATGGAAATGTTGG TERM 1396 1153315 - 1153351 + r 100 -12.5 -4.77567 | opp_overlap 1153315, overlap 1153310 TCCACTTAGAAAAAA CGCATATTATCAAGTGT TAA AAACTTGCTAATATGCG TTTTATTATGGAAAT TERM 1397 1153351 - 1153315 - R 100 -12.5 -5.28176 | opp_overlap 1153315 1153310 TCCACTTAGAAAAAA CGCATATTATCAAGTGT TAA AAACTTGCTAATATGCG TTTTATTATGGAAAT SPD_1122 1154273 - 1153425 - | DNA processing protein DprA, putative TERM 1398 1154359 - 1154338 - R 89 -6.6 -5.59502 | TAAAAAATCAAAAAA CATCCGAC TATTTT GTCAGATG TTGGAATCTTTAATT licC 1155058 - 1154369 - | CTP:phosphocholine cytidylyltransferase licB 1155948 - 1155070 - | protein LicB pck 1156807 - 1155938 - | choline kinase SPD_1126 1157846 - 1156824 - | alcohol dehydrogenase, zinc-containing ispD 1158558 - 1157851 - | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase TERM 1399 1158804 - 1158792 - H 75 -4.9 -4.86731 | opp_overlap 1158792 TTTCCTTAAAGAAAA CTTAA AAC TTAAG ATTTGAAACTTCAAA SPD_1128 1158894 - 1160381 + | polysaccharide biosynthesis protein, putative TERM 1400 1161021 - 1161011 - g 70 -5.4 -4.48175 | AAAATTTAAGGAAAA GGAA GTC TTCC CAAGTGGTACCTTTG licD1 1160391 - 1161194 + | phosphotransferase LicD1 licD2 1161196 - 1162005 + | phosphotransferase LicD2 TERM 1401 1162139 - 1162089 - T 100 -30.4 -3.32819 | opp_overlap 1162089 1162094, overlap 1162094 TACATATTCCCACAA TAAAACGCATCATATCAAGGTTTT TGA AAAACCTTGATATGATGCGTTTTA TAATTTTAAAGACTT TERM 1402 1162089 - 1162139 + T 100 -30.4 -3.08776 | opp_overlap 1162089 1162094, overlap 1162094 TACATATTCCCACAA TAAAACGCATCATATCAAGGTTTT TGA AAAACCTTGATATGATGCGTTTTA TAATTTTAAAGACTT TERM 1403 1162094 - 1162134 + T 100 -25.9 -4.67635 | opp_overlap 1162089 1162094, overlap 1162089 ATTCCCACAATAAAA CGCATCATATCAAGGTTTT TGA AAAACCTTGATATGATGCG TTTTATAATTTTAAA TERM 1404 1162134 - 1162094 - T 100 -25.9 -4.77567 | opp_overlap 1162094 1162089, overlap 1162089 ATTCCCACAATAAAA CGCATCATATCAAGGTTTT TGA AAAACCTTGATATGATGCG TTTTATAATTTTAAA carB 1165456 - 1162280 - | carbamoyl phosphate synthase large subunit carA 1166848 - 1165769 - | carbamoyl phosphate synthase small subunit TERM 1405 1166356 - 1166340 - G 72 -8.7 -3.58522 | overlap 1166345 AGCACCACGCTCAAA CCAACTC CTG GAGCTGG ATAAGACGTTTTAGT TERM 1406 1166865 - 1166880 + r 71 -6.8 -4.20712 | overlap 1166875 TTTTCACCTCTCGTG GACGCT CACT GGCGTC TTTTAACGTCTTGTG pyrB 1167821 - 1166898 - | aspartate carbamoyltransferase catalytic subunit pyrR 1168361 - 1167840 - | pyrimidine regulatory protein PyrR TERM 1407 1168402 - 1168383 - R 100 -10.8 -5.26119 | opp_overlap 1168378, overlap 1168394 CCTCCAAAAAGAAAA GTCTCCTT AAAC AAGGAGAC TTGAAATTTATAGCC nth 1169201 - 1168572 - | endonuclease III TERM 1408 1169165 - 1169183 + g 86 -4.5 -5.40072 | overlap 1169168 GGGCAATGATTTCTT CTAGCAC CTTTC GTGCTCG TTTTTTTGACAAGAC SPD_1136 1169743 - 1169201 - | hypothetical protein TERM 1409 1170322 - 1170361 + H 76 -4.6 -5.20633 | gap 1, opp_overlap 1170335, overlap 1170326 GGAGACATGAACAGC TAAG-TCTATCAAATAAAG AAC CTTTATTTAGTAGATCTTG TTTTTGTCTCTTTTT TERM 1410 1170326 - 1170356 + H 73 -7.8 -3.89226 | opp_overlap 1170335, overlap 1170322 ACATGAACAGCTAAG TCTATCAAATAAAG AAC CTTTATTTAGTAGA TCTTGTTTTTGTCTC TERM 1411 1170439 - 1170460 + H 95 -8.8 -5.19328 | TGACATAGACTTTGG GCTCTACT AGGTAA AGTAGAGC TTTTTGTTATGCACT TERM 1412 1170741 - 1170730 - g 73 -5.8 -4.59109 | TACATTCCTCAAAAA GTCC CTGA GGAC CTAAAAAAGAAAACT TERM 1413 1171197 - 1171181 - g 78 -7.3 -4.41616 | overlap 1171162 1171189 ATTTTGCCAAACAAA GTCAGCA AGC TGCTAAC AACCAAAGAGCCTAC SPD_1137 1170469 - 1172028 + | ABC transporter, ATP-binding protein TERM 1414 1172104 - 1172139 + T 100 -12.1 -4.7416 | opp_overlap 1172104 CTTCCCATAGTAAAA CGCATAATATCAAGT TTTCAC ACCTGATATTATGCG TTTTTCAGATTTTAA TERM 1415 1172139 - 1172104 - T 100 -14.3 -4.34402 | opp_overlap 1172104 CTTCCCATAGTAAAA CGCATAATATCAAGT TTTCAC ACCTGATATTATGCG TTTTTCAGATTTTAA htpX 1173076 - 1172177 - | heat shock protein HtpX TERM 1416 1172214 - 1172251 + g 77 -7.7 -4.19336 | opp_overlap 1172214 1172231, overlap 1172204 ATCCGTTCTGAGATA GGTGGGTGGGTATAAAA GAGT TTTTGGAACCCCCCACC TTTCTTGGGATCATT lemA 1173638 - 1173078 - | LemA protein gidB 1173732 - 1174445 + | glucose-inhibited division protein B TERM 1417 1174525 - 1174511 - f 81 -5.8 -5.00884 | AGGCTCGGGAAAAAA TGATTT ACA AAATCA GCCTCGCTCTTTTAT TERM 1418 1174574 - 1174560 - f 81 -5.8 -5.00884 | AGGCTCGGGAAAAAA TGATTT ACA AAATCA GCCTCGCTCTTTTAT TERM 1419 1174598 - 1174634 + F 76 -9.7 -2.87468 | opp_overlap 1174609, overlap 1174601 1174609 CTTTTATTTCTAGGC TCGGGAAAAAATGATTT ACA AAATCATTTTTTTCTGC TATACTATCCTAAGC TERM 1420 1174601 - 1174631 + F 84 -12.2 -2.6891 | opp_overlap 1174609, overlap 1174598 1174609 TTATTTCTAGGCTCG GGAAAAAATGATTT ACA AAATCATTTTTTTC TGCTATACTATCCTA TERM 1421 1174623 - 1174609 - f 81 -5.8 -5.00884 | opp_overlap 1174609 1174601 1174598 AGGCTCGGGAAAAAA TGATTT ACA AAATCA TTTTTTTCTGCTATA TERM 1422 1174609 - 1174623 + F 88 -5.8 -5.69473 | opp_overlap 1174609, overlap 1174601 1174598 AGGCTCGGGAAAAAA TGATTT ACA AAATCA TTTTTTTCTGCTATA uraA 1174797 - 1176080 + | uracil-xanthine permease TERM 1423 1176085 - 1176075 - T 74 -5.4 -4.75288 | CCATACGAAAATAAA GACT AAG AGTC TAAATACACCTAATC TERM 1424 1176099 - 1176120 + T 100 -13.1 -4.80882 | opp_overlap 1176090 1176099 TCTAAATACACCTAA TCCACTCAG ACAG CTGAGTGGA TTTTTCGTATACCAT TERM 1425 1176120 - 1176099 - T 91 -13.1 -3.21872 | opp_overlap 1176099, overlap 1176090 TCTAAATACACCTAA TCCACTCAG ACAG CTGAGTGGA TTTTTCGTATACCAT ffh 1177846 - 1176275 - | signal recognition particle protein TERM 1426 1177529 - 1177499 - G 83 -9.8 -3.80461 | opp_overlap 1177492 1177522, overlap 1177524 CAATTTACCAGCAAA GGTTGTTTTACCAG CCC CTTGTAAACCAACC ATCATGATGATGGTT TERM 1427 1177546 - 1177524 - G 100 -15 -3.53444 | opp_overlap 1177522, overlap 1177499 CCAGCCCCTTGTAAA CCAACCATCA TGA TGATGGTTGG AATCTTAGGTGACTT SPD_1143 1178190 - 1177858 - | hypothetical protein SPD_1144 1178658 - 1178281 - | hypothetical protein TERM 1428 1179885 - 1179851 - g 80 -2.1 -5.626 | gap 1, overlap 1179852 1179853 1179855 GATTTTACAAAAAAA TGGAGAACTGGC-AGA ACTC TCTAGCCTGTCCCCTA TCGTCCAATCCCTTG SPD_1145 1178730 - 1180034 + | hypothetical protein TERM 1429 1180822 - 1180783 - g 84 -2.1 -5.75822 | overlap 1180784 1180816 CAGAAATCAAAAAAA TCGCCAAATACATCACT AAAACA AATGACGAATCCGGCGT TGCCCACGCCATCCG SPD_1146 1180047 - 1180853 + | Cof family protein TERM 1430 1180895 - 1180868 - T 93 -12.8 -3.39349 | opp_overlap 1180874, overlap 1180874 AAAGGAAAGAATAGA CTAAAACCGCTC AGCT GAGCGGTTTTTG ATGTCTAATTACTGC TERM 1431 1180874 - 1180889 + T 100 -10.4 -4.85129 | opp_overlap 1180868 1180874 AAGAATAGACTAAAA CCGCTC AGCT GAGCGG TTTTTGATGTCTAAT TERM 1432 1180889 - 1180874 - T 100 -10.4 -4.45723 | opp_overlap 1180874, overlap 1180868 AAGAATAGACTAAAA CCGCTC AGCT GAGCGG TTTTTGATGTCTAAT TERM 1433 1180990 - 1181007 + T 100 -9.9 -5.16237 | opp_overlap 1180990 GGAGCTAGATAAAAA CTCTGCT GAAA AGCAGAG TTTTTTAGTCGAATT TERM 1434 1181007 - 1180990 - T 100 -9.9 -4.99035 | opp_overlap 1180990 GGAGCTAGATAAAAA CTCTGCT GAAA AGCAGAG TTTTTTAGTCGAATT rplS 1181368 - 1181021 - | 50S ribosomal protein L19 crcB1 1181816 - 1181487 - | CrcB protein crcB2 1182184 - 1181810 - | CrcB protein SPD_1151 1182447 - 1182181 - | hypothetical protein TERM 1435 1182407 - 1182419 + g 71 -6.3 -4.16016 | TTGACAATTTGGTCG TCGAT TTG ATCGA TTTCTTGACGAATAA TERM 1436 1182553 - 1182529 - R 84 -6.5 -5.18726 | opp_overlap 1182529 TCTCGATAAGAAAAA TGCACTGAT TGATTAC ATCAGCGCA CTTTTATGTTTATCC fld 1183006 - 1182563 - | flavodoxin TERM 1437 1183086 - 1183069 - H 78 -2.1 -5.61881 | gap 1 TTTTAAAAATAAAAA TTC-TTGT GCT ACAATGAA ATGAGAAAGAATTGA TERM 1438 1183276 - 1183252 - g 91 -7.9 -5.24531 | opp_overlap 1183263, overlap 1183253 ATTTCCCAGAAAAAA CCATCAAAGCC GTC GGTTTTGATGA ACCAACTCTTACTTG TERM 1439 1183275 - 1183253 - g 76 -9.2 -3.73995 | opp_overlap 1183263, overlap 1183252 TTTCCCAGAAAAAAC CATCAAAGCC GTC GGTTTTGATG AACCAACTCTTACTT SPD_1153 1183110 - 1184045 + | DHH subfamily 1 protein TERM 1440 1184168 - 1184150 - g 82 -3.9 -5.46698 | TGCAAAATGAAAAAA GATATCC ATCCA GAATATC GCCCAGTTGTCTTCA rpmE2 1184141 - 1184383 + | 50S ribosomal protein L31 type B TERM 1441 1184392 - 1184409 + T 95 -6.3 -5.80003 | opp_overlap 1184392 1184390 CAAATAATGATAAGA GAACAGT TTCG GCTGTTC TTTTTTGTTTCTTGA SPD_1155 1185018 - 1184440 - | hypothetical protein TERM 1442 1184939 - 1184924 - GT 87 -3.2 -5.72622 | overlap 1184926 TTCACAAAGAAAAAA CTCAAG CTTT CTTGGG CACCTGCTGGGGAAA TERM 1443 1185003 - 1184965 - GT 70 -2.7 -5.04356 | overlap 1184972 1184979 GGAAAGAATTAAAAA TGACAAAGCTAAAA-CTAG TAA CCAGCTTTTAGCCTT-CCA ATAATTTCTGACCAA TERM 1444 1184997 - 1184972 - GT 74 -6.3 -4.27774 | gap 1, overlap 1184965 1184979 ATTAAAAATGACAAA GCTAAAA-CTAG TAA CCAGCTTTTAGC CTTCCAATAATTTCT SPD_1156 1185997 - 1184993 - | Dyp-type peroxidase family protein SPD_1157 1186315 - 1186049 - | hypothetical protein TERM 1445 1186915 - 1186927 + H 80 -2.7 -5.64421 | opp_overlap 1186911, overlap 1186911 AATTGAAAGAATTTT TAGAA AAT TTCTG TTTTTTCTTTACAGT gdhA 1187003 - 1188349 + | glutamate dehydrogenase TERM 1446 1188365 - 1188387 + T 95 -8.5 -4.90013 | GATTTATTTGCTTAA TCCTCAATC ACTAC GATTGGGGA TTTTTAGTTGAGTTA TERM 1447 1188699 - 1188680 - T 100 -8.6 -6.01725 | opp_overlap 1188680 1188679 AACAAAAAGAAAAAA CGCTACTC CTAA GAATAGCG ATTTAATCATGTTTT SPD_1159 1189015 - 1188845 - | hypothetical protein SPD_1160 1189669 - 1189028 - | ABC transporter, ATP-bindng protein SPD_1161 1189941 - 1190378 + | hypothetical protein SPD_1162 1190872 - 1190669 - | hypothetical protein TERM 1448 1190896 - 1190934 + r 77 -9.1 -3.31144 | gap 2, opp_overlap 1190895 1190899 1190900 1190924, overlap 1190899 CCTTATGGATTAGAG GAAGC-GCT-CCTTGGTTT CAC GAATCAAGGCAGCAGCTTC TTCTACAACTGGACG SPD_1163 1191621 - 1190890 - | N-acetylneuraminate lyase, putative cdd-2 1192246 - 1191839 - | cytidine deaminase TERM 1449 1192501 - 1192446 - R 93 -12.4 -3.40622 | gap 1, opp_overlap 1192445, overlap 1192444 TATGCGGAAAATATA TTTGGTTTCTAGATTTATCATTATCCA ATT TGAATGACAAT-AATCTAGAAACCAAA CGCTTTATTATTTAC SPD_1165 1193022 - 1192534 - | hypothetical protein TERM 1450 1192767 - 1192800 + g 71 -3.9 -4.98255 | overlap 1192770 CATACAATGGATTAT CTTTCTCCATAATCT TTTG AAATTCTGGAGATAG TTTTTGTGCTTCAGC SPD_1166 1194436 - 1193027 - | hypothetical protein TERM 1451 1194298 - 1194274 - G 77 -5.1 -4.96388 | AATCATCAAAGAAAA CATTTGGATAA CTG TTATCAAAACG AATTTCCCATGGTTT TERM 1452 1194413 - 1194397 - G 72 -4.5 -4.8269 | opp_overlap 1194387 1194397 GATAAGGATTAAAAA TTCCTTT ATC AAAGAAA TATATTTTTTTATTT SPD_1167 1196428 - 1194446 - | ABC transporter, ATP-binding protein SPD_1168 1197292 - 1196441 - | oligopeptide ABC transporter, pemease protein TERM 1453 1197214 - 1197190 - G 70 -8.7 -3.32562 | overlap 1197192 ATAAAGGTGCTAGAA TACATGCTAAT AGA ATTAGCATGAA GCATATAAAGCCGAT TERM 1454 1197212 - 1197192 - G 82 -11.3 -3.22668 | overlap 1197190 AAAGGTGCTAGAATA CATGCTAAT AGA ATTAGCATG AAGCATATAAAGCCG SPD_1169 1198259 - 1197309 - | oligopeptide ABC transporter, permease protein TERM 1455 1198328 - 1198280 - R 77 -5.6 -5.00616 | overlap 1198283 TTTCTCCTGAAAAAA CAAGAGTG-AGAGATACATGATTC AAT AAACCA-GCATCTCTACACTCCTA AAAGATTATCAAACT TERM 1456 1198325 - 1198283 - R 80 -7.3 -4.61482 | overlap 1198280 CTCCTGAAAAAACAA GAGTG-AGAGATACATGATTC AAT AAACCA-GCATCTCTACACTC CTAAAAGATTATCAA SPD_1170 1199997 - 1198369 - | oligopeptide ABC transporter,oligopeptide-binding protein TERM 1457 1198872 - 1198890 + g 72 -4.6 -4.82678 | overlap 1198875 TGCTATTATCGTATT TAGCTTCT TTA AGAAGTTG TTTTGCTTTTTCTGG TERM 1458 1198875 - 1198887 + g 74 -6.3 -4.47007 | overlap 1198872 TATTATCGTATTTAG CTTCT TTA AGAAG TTGTTTTGCTTTTTC TERM 1459 1199894 - 1199907 + g 83 -5.3 -5.26875 | TTTTCTTTTCCAGAC TCTGA AAAA TCAGA TTTTTTGCTTCCCGA SPD_1171 1201002 - 1200079 - | hypothetical protein nanE-2 1201724 - 1201026 - | N-acetylmannosamine-6-phosphate 2-epimerase TERM 1460 1201829 - 1201871 + r 88 -7.2 -4.98531 | overlap 1201816 1201855 ATTCGTAATCCGAAG CGTTTACGATGATTTCGATA GGT TGTTGAAAACATTTTAAACG TTTTTACTTTGGCAA SPD_1174 1202838 - 1202617 - | hypothetical protein TERM 1461 1203232 - 1203252 + r 88 -6.2 -5.58454 | gap 1, opp_overlap 1203232 TTGTCGCTAAAAAAA TGCATCAGG TTAT CCTG-TGCA TTTTTTTGATATCAA TERM 1462 1203252 - 1203232 - R 86 -6.2 -5.40072 | gap 1, opp_overlap 1203232 TTGTCGCTAAAAAAA TGCATCAGG TTAT CCTG-TGCA TTTTTTTGATATCAA TERM 1463 1203517 - 1203490 - R 100 -9.2 -4.8667 | opp_overlap 1203490 TACAGTTGACAAAAA GACAAACCAGCC TAAT GACTAGCTTGTC TTCAATCAAGAGAGG SPD_1175 1205221 - 1203902 - | hypothetical protein SPD_1176 1205964 - 1205224 - | ABC transporter, ATP-binding protein TERM 1464 1205594 - 1205604 + g 88 -2.6 -5.9873 | AAGTTTTCTACATTT TTAA TAG TTAA TTTTTTTTGTGATAA SPD_1177 1207586 - 1205979 - | drug efflux ABC transporter, ATP-binding/permease protein TERM 1465 1206182 - 1206193 + g 100 -4.4 -5.93252 | opp_overlap 1206178 TTCTAATCAGAGCTC TAGC TAAA GCTA TTTTTTGTTTTTGAC SPD_1178 1209523 - 1207583 - | prolyl oligopeptidase family protein SPD_1179 1212165 - 1209556 - | hypothetical protein TERM 1466 1211516 - 1211532 + g 80 -2.2 -5.61913 | opp_overlap 1211518, overlap 1211518 GCATTATCTATAATA AAGGGA AAGTC TCCCTG TTTTTTATCTTTCTT TERM 1467 1211530 - 1211518 - G 70 -5.5 -4.33819 | opp_overlap 1211518 1211516 ATTATCTATAATAAA GGGAA AGT CTCCC TGTTTTTTATCTTTC TERM 1468 1212257 - 1212235 - R 100 -16.4 -5.30616 | TTATTTAAATAAAAA GGGAGAATCC TTT GGATTCTCCC CATATAAGCACTAAC SPD_1180 1213270 - 1212683 - | CAAX amino terminal protease family protein SPD_1181 1213506 - 1213363 - | hypothetical protein SPD_1182 1213899 - 1213519 - | hypothetical protein SPD_1183 1214232 - 1213954 - | hypothetical protein SPD_1184 1214494 - 1214240 - | hypothetical protein SPD_1185 1214664 - 1214491 - | hypothetical protein TERM 1469 1214712 - 1214688 - gR 100 -9.4 -6.09196 | CTGAAAATAAAAAAA GGAGAACAAT ATTCA ACTGTTCTCC AAAATAATTTTATTA TERM 1470 1214762 - 1214738 - gR 100 -10.8 -5.65496 | opp_overlap 1214753, overlap 1214739 TATTAAAAAGAAAAA CCCTGCCAAA GAATT TTTGGCAGGA AACCAAATCAATTTA TERM 1471 1214761 - 1214739 - gR 95 -12.1 -3.96857 | opp_overlap 1214753, overlap 1214738 ATTAAAAAGAAAAAC CCTGCCAAA GAATT TTTGGCAGG AAACCAAATCAATTT SPD_1186 1214640 - 1214822 + | hypothetical protein rplL 1215220 - 1214852 - | 50S ribosomal protein L7/L12 rplJ 1215796 - 1215296 - | 50S ribosomal protein L10 TERM 1472 1215870 - 1215851 - g 85 -4.2 -5.61881 | TTTCAAAAAGAAAAA CGCGCCCA AACC TAGACACG AAAGTACAATACGCT TERM 1473 1215943 - 1215955 + G 89 -5.5 -5.41143 | AGTCGAGCTCCCCTA CTGTC TTA GGCAG TTTTTTTAAACCGTA TERM 1474 1216013 - 1215999 - g 72 -4.3 -4.8236 | opp_overlap 1215987 CAGTCAAAAAAAGAA TGCAA GATTT TTGCA AACTTTTTTTAAAAT SPD_1189 1215801 - 1216025 + | hypothetical protein SPD_1190 1217305 - 1216046 - | chlorohydrolase TERM 1475 1217382 - 1217394 + r 71 -7.7 -3.58905 | CCGTAGGTGTGGTTA CTGAC TTC GTCAG TTCTATCTGCAACCT TERM 1476 1217472 - 1217452 - R 72 -8.3 -3.35996 | opp_overlap 1217469, overlap 1217453 CAGTCTTATCTACAA CCTCAAAGC TGT GCTTTGAGC AACCTACGGCTAGCT TERM 1477 1217471 - 1217453 - R 84 -11.8 -2.61383 | opp_overlap 1217469, overlap 1217452 AGTCTTATCTACAAC CTCAAAGC TGT GCTTTGAG CAACCTACGGCTAGC SPD_1191 1219358 - 1217607 - | ABC transporter, ATP-binding/permease protein TERM 1478 1219195 - 1219181 - G 70 -2.8 -5.03747 | AAATCTGCCAAAAAA CTGG TGATGAT CCAG CCACTAGGACTTGGT SPD_1192 1221084 - 1219360 - | ABC transporter, ATP-binding/permease protein TERM 1479 1221114 - 1221139 + r 83 -6.1 -5.18866 | opp_overlap 1221116 1221120, overlap 1221116 CATATTCTAGAAATG AAGAAAGTGGG AAGC CCCACTCTCTG TTTTATTTGTTTAAG TERM 1480 1221137 - 1221116 - R 89 -10.9 -3.61244 | opp_overlap 1221116 1221114, overlap 1221120 TATTCTAGAAATGAA GAAAGTGGG AAGC CCCACTCTC TGTTTTATTTGTTTA TERM 1481 1221116 - 1221137 + r 85 -8.7 -4.20284 | opp_overlap 1221116 1221120, overlap 1221114 TATTCTAGAAATGAA GAAAGTGGG AAGC CCCACTCTC TGTTTTATTTGTTTA TERM 1482 1221133 - 1221120 - R 83 -8.1 -4.42976 | opp_overlap 1221116 1221114, overlap 1221116 CTAGAAATGAAGAAA GTGGG AAGC CCCAC TCTCTGTTTTATTTG msrAB1 1222080 - 1221142 - | bifunctional methionine sulfoxide reductase A/B protein TERM 1483 1222170 - 1222182 + r 71 -7.7 -3.58905 | CCGTAGGTATGGTTA CTGAC TTC GTCAG TTCTATCTGCAACCT TERM 1484 1222259 - 1222241 - R 78 -10.4 -2.61383 | overlap 1222240 AGTTCTATCCACAAC CTCAAAAC ACT GTTTTGAG CAGCCTGCGGCTAGC thrB 1223245 - 1222376 - | homoserine kinase TERM 1485 1222816 - 1222800 - G 70 -9.5 -2.73771 | overlap 1222799 TCACACTCTGGAAAG TCTGCTA CGA TAGCAGA GACTTGCCCTTCAAC hom 1224533 - 1223247 - | homoserine dehydrogenase TERM 1486 1224017 - 1224049 + g 70 -9.1 -3.19668 | overlap 1224044 CGTAAGACCAGCCTT CTTCCACCATCTTGG TCA CCATGAAGTTGGAAG TTCCGTTGACTACTC TERM 1487 1224646 - 1224631 - R 100 -7.6 -5.98675 | opp_overlap 1224631 1224630 TATAAAAAGAAAAAA CGAATC AGAC GATTCG CTCTTCTTAAAATCT mecA 1225421 - 1224684 - | adaptor protein TERM 1488 1225510 - 1225546 + r 87 -10.9 -3.35996 | opp_overlap 1225511, overlap 1225511 1225520 CAGACAGATAGAAAA AGCCTTCAAAATCGGCT CTT AGCCGACTTTGAAGACC TTATACATCAGAATA TERM 1489 1225511 - 1225545 + r 93 -14.4 -2.61383 | opp_overlap 1225511, overlap 1225510 1225520 AGACAGATAGAAAAA GCCTTCAAAATCGGCT CTT AGCCGACTTTGAAGAC CTTATACATCAGAAT TERM 1490 1225545 - 1225511 - R 100 -18.8 -5.08178 | opp_overlap 1225510 1225511 1225520 AGACAGATAGAAAAA GCCTTCAAAATCGGCT CTT AGCCGACTTTGAAGAC CTTATACATCAGAAT SPD_1197 1226597 - 1225563 - | hypothetical protein TERM 1491 1226582 - 1226572 - G 70 -5.4 -4.43208 | overlap 1226558 AGATTTGCAAACAAA TCAG CTA CTGA ATAATGTTCAAACAT SPD_1198 1228059 - 1226626 - | hypothetical protein SPD_1199 1229061 - 1228075 - | glycosyl transferase, group 2 family protein SPD_1200 1230163 - 1229063 - | glycosyl transferase, group 1 family protein licD3 1231001 - 1230156 - | phosphotransferase LicD3 TERM 1492 1231111 - 1231072 - R 84 -6.6 -5.07567 | opp_overlap 1231101 GCAGACTGTAAAAAA TCAAAGCCTGACTACTAT CCAA ATAGCTATCAAACTTTGA TTTTTCTGTCTTATA TERM 1493 1231101 - 1231111 + r 73 -4 -5.12474 | opp_overlap 1231072 CTATCCAAATAGCTA TCAA ACT TTGA TTTTTCTGTCTTATA psr 1232554 - 1231280 - | Psr protein TERM 1494 1232287 - 1232301 + g 100 -10 -5.42198 | opp_overlap 1232289 TAAAAATTCGTTTAA GACGGA GCT TCCGTC TTTTCTTTTTTGGAG SPD_1203 1233399 - 1232551 - | prephenate dehydratase aroK 1233872 - 1233396 - | shikimate kinase aroA 1235148 - 1233865 - | 3-phosphoshikimate 1-carboxyvinyltransferase TERM 1495 1235221 - 1235195 - R 77 -5.2 -4.91511 | opp_overlap 1235215, overlap 1235215 ATTTTATCATAAAAA GCCAGAAATTCC TTA AAAATTCCTGAC TTTAGGATCGTTCTT SPD_1206 1235578 - 1235240 - | hypothetical protein tyrA 1236692 - 1235589 - | prephenate dehydrogenase TERM 1496 1235632 - 1235658 + g 72 -4.4 -4.67011 | opp_overlap 1235632 TTTTCTGTTATGAGA TGCTCAGCTCTT TCC AAGTCTTGAGCA TTTTTAAATGAAATT aroC 1237868 - 1236702 - | chorismate synthase aroB 1238945 - 1237878 - | 3-dehydroquinate synthase aroE 1239818 - 1238964 - | shikimate 5-dehydrogenase aroD 1240485 - 1239808 - | 3-dehydroquinate dehydratase SPD_1212 1241654 - 1240482 - | hypothetical protein TERM 1497 1241782 - 1241804 + r 100 -10.6 -4.96501 | opp_overlap 1241782 AATCACAATAAAAAA TGCTCTTCCG TCT TGGAGGAGCA TTTCTTTTTATCAAC TERM 1498 1241804 - 1241782 - R 93 -7.7 -5.59534 | opp_overlap 1241782 AATCACAATAAAAAA TGCTCTTCC GTCTT GGAGGAGCA TTTCTTTTTATCAAC SPD_1213 1243966 - 1242332 - | hypothetical protein TERM 1499 1243153 - 1243163 + g 75 -5.4 -4.7373 | opp_overlap 1243153 CGTCATAAAAACGAG GAAG GAC CTTC TTTTTGGTCAGATAA SPD_1214 1244696 - 1243947 - | ABC transporter, ATP-binding protein TERM 1500 1244300 - 1244276 - G 70 -3.6 -4.91109 | CCCCGATGACAAAAA CTTTCTGACG CATTC CATGAGAAAG GGTTTCAATAACCTG TERM 1501 1244483 - 1244493 + g 73 -6.8 -4.14739 | overlap 1244476 CAATCTTTCGTTTGA TCGC CAA GCGA TTTTCCGATAACTCC amy 1244874 - 1246328 + | cytoplasmic alpha-amylase TERM 1502 1246346 - 1246367 + T 83 -5.1 -5.47159 | opp_overlap 1246346 GCTCATAATAACCAA GCTAGGTCC AAGC GGATTTGGC TTTTTTGTATTCACA TERM 1503 1246408 - 1246387 - T 88 -7.3 -4.87665 | opp_overlap 1246387 1246390 TTGTATTCACAAAAA GACCTACCC AAAT GGATAGATC TTTACTTGATTACAA alaS 1249036 - 1246418 - | alanyl-tRNA synthetase TERM 1504 1246748 - 1246768 + g 89 -6.8 -5.28942 | gap 1, overlap 1246750 ATCTTTGAAGATATC GCCTGCGGC TGCA GCTGC-GGC TTTTTCTTTCAACTC SPD_1217 1249543 - 1249058 - | hypothetical protein TERM 1505 1250299 - 1250279 - R 84 -8.3 -4.58395 | opp_overlap 1250277 1250279 TCTATTCCTTAAAAA CGAACCAGC TTG ACTGATTCG TCTTCTTACGTTTAT potD 1251388 - 1250318 - | spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein potC 1252158 - 1251385 - | spermidine/putrescine ABC transporter, permease protein potH 1252961 - 1252155 - | spermidine/putrescine ABC transporter, permease protein potA 1254099 - 1252942 - | spermidine/putrescine ABC transporter, ATP-binding protein TERM 1506 1253131 - 1253149 + g 70 -8.2 -3.61764 | overlap 1253128 GATGGCCTTACGGGT TGAGTGGA TCA TCCATTCA TTTCCAAGTTCGTCA murB 1255108 - 1254158 - | UDP-N-acetylenolpyruvoylglucosamine reductase TERM 1507 1255215 - 1255205 - R 76 -4.6 -5.18726 | opp_overlap 1255199 1255205, overlap 1255199 TTTGCATAAGAAAAA GAGG TTC CCCC CTTTTTATGATTTTT SPD_1223 1255972 - 1255220 - | hypothetical protein budA 1256713 - 1255982 - | alpha-acetolactate decarboxylase SPD_1225 1256855 - 1258126 + | hypothetical protein TERM 1508 1258112 - 1258139 + T 95 -8.5 -5.3798 | opp_overlap 1258093 1258112 TTAAACTATTTAAAA GCAGAATTGGA ATGACA TCCAACTCTGC TTTTTCTTATTCTTC TERM 1509 1258139 - 1258112 - T 100 -10.7 -4.26079 | opp_overlap 1258112, overlap 1258093 TTAAACTATTTAAAA GCAGAATTGGA ATGACA TCCAACTCTGC TTTTTCTTATTCTTC SPD_1226 1258961 - 1258146 - | amino acid ABC transporter, amino acid-binding protein TERM 1510 1259012 - 1259024 + r 72 -2.7 -5.30575 | TAACGATATCCAAGT TACTT GTC AAGTG TTTTTTAAATTTTTA SPD_1227 1259771 - 1259118 - | phosphate transport system regulatory protein PhoU, putative TERM 1511 1259570 - 1259582 + g 74 -4.9 -4.69559 | overlap 1259559 GTTGTTGGAGTGCGA TCATT TCA AATGA TTTCTTTTCCAGTTT TERM 1512 1259683 - 1259671 - G 70 -5.5 -4.37886 | opp_overlap 1259674, overlap 1259674 TCATGCGTGACAAAA GCACG TAC CGTAC GATTGATTTGTGAGA SPD_1228 1260541 - 1259783 - | phosphate ABC transporter, ATP-binding protein, putative TERM 1513 1260021 - 1260036 + g 73 -7.6 -4.12902 | AAAGCCGAAGTTGGC TCATCC AAGA GGATGA TTTTAGGACTAGTTG SPD_1229 1261357 - 1260554 - | phosphate ABC transporter, ATP-binding protein, putative SPD_1230 1262252 - 1261368 - | phosphate ABC transporter, permease protein, putative SPD_1231 1263159 - 1262242 - | phosphate ABC transporter, permease protein, putative TERM 1514 1263095 - 1263071 - G 73 -7.9 -3.86206 | opp_overlap 1263070 1263073, overlap 1263073 ACTATCAAAGAAAGA CAGGCAAAGGT CAA ACCTTTTCCTA ATTTCTCCAGACGAG TERM 1515 1263093 - 1263073 - G 72 -8.3 -3.50491 | opp_overlap 1263070 1263073, overlap 1263071 TATCAAAGAAAGACA GGCAAAGGT CAA ACCTTTTCC TAATTTCTCCAGACG SPD_1232 1264037 - 1263159 - | phosphate ABC transporter, phosphate-binding protein, putative SPD_1233 1265915 - 1264611 - | NOL1/NOP2/sun family protein TERM 1516 1265864 - 1265842 - G 93 -12.8 -4.07568 | opp_overlap 1265841 1265844 GCTTCCTCCTCAAAA GAGGCAAGAA AAT CTCTTGCCTC ATCTCCTAGTATCTC SPD_1234 1266689 - 1265916 - | inositol monophosphatase family protein TERM 1517 1266034 - 1266023 - G 75 -5.8 -4.72986 | GAGCTTCACCAAAAA GGGT CACA ACCC GATAGCCCAGACTTT SPD_1235 1266957 - 1266679 - | hypothetical protein TERM 1518 1266920 - 1266890 - G 100 -7 -5.56568 | gap 1, overlap 1266894 ACATCATTAAAAAAA GAAAGCACTGAAG CAAGTT CTTCAGTGC-TCC ACGACAAATCTAGTG TERM 1519 1266917 - 1266894 - G 100 -11.1 -5.23943 | overlap 1266890 CATTAAAAAAAGAAA GCACTGAAG CAAGTT CTTCAGTGC TCCACGACAAATCTA spxA 1267358 - 1266957 - | transcriptional regulator Spx TERM 1520 1267438 - 1267466 + r 73 -8.3 -3.54459 | opp_overlap 1267440, overlap 1267423 1267420 1267440 GGATTTTTAGAAAAA AAGCCTATTTTTT CAA GAAAAATAGGCTG TTTGCGAACGATTGA TERM 1521 1267464 - 1267440 - R 100 -10.2 -5.61596 | opp_overlap 1267423 1267420 1267438 1267440 ATTTTTAGAAAAAAA GCCTATTTTT TCAAG AAAAATAGGC TGTTTGCGAACGATT TERM 1522 1267440 - 1267464 + r 87 -10.9 -3.34894 | opp_overlap 1267440, overlap 1267423 1267420 1267438 ATTTTTAGAAAAAAA GCCTATTTTTT CAA GAAAAATAGGC TGTTTGCGAACGATT SPD_1237 1268185 - 1267568 - | hypothetical protein SPD_1238 1268948 - 1268175 - | hydrolase, haloacid dehalogenase-like family protein SPD_1239 1269696 - 1268959 - | acyl-ACP thioesterase, putative SPD_1240 1270831 - 1269701 - | coproporphyrinogen III oxidase TERM 1523 1270910 - 1270872 - R 100 -9.6 -4.9792 | opp_overlap 1270870 1270872 GATTCCAGATAAAAA TCACCATCCCCAGATACA TAG TCCGTCCGGAGATGGTGA TGGTTTATTCTTCTG SPD_1241 1271304 - 1270915 - | hypothetical protein SPD_1242 1271703 - 1271320 - | hypothetical protein lgt 1272492 - 1271704 - | prolipoprotein diacylglyceryl transferase hprK 1273420 - 1272485 - | HPr kinase/phosphorylase TERM 1524 1273538 - 1273520 - R 79 -3.9 -5.48213 | gap 1, opp_overlap 1273521, overlap 1273521 TATTTAAAAGAAAAA GGACTAGA TTTC TCTAG-CC TTTCATTTCAATTAG rpsU 1273726 - 1273550 - | ribosomal protein S21 nagB 1274573 - 1273866 - | glucosamine-6-phosphate isomerase TERM 1525 1275555 - 1275535 - g 72 -8.3 -3.57263 | opp_overlap 1275543 1275548, overlap 1275543 AGTTTGATGGGCAAA TCCAAGCAG ATT CTGGTTGGA CCAATATCTTTATCA queA 1274724 - 1275752 + | S-adenosylmethionine:tRNA ribosyltransferase-isomerase TERM 1526 1276053 - 1276065 + T 71 -7.7 -3.58905 | GGATTATATATGTGA CTGAC TTC GTCAG TTCTATCTACAACCT TERM 1527 1276214 - 1276238 + T 71 -3 -5.06505 | gap 1 CACTTTTTTATAGTC GCTATAAGATG ACCT TATCT-ATAGC TTTTTATATATAATT SPD_1248 1276690 - 1276301 - | hypothetical protein TERM 1528 1276861 - 1276873 + r 71 -3.3 -5.02476 | CTTGGACAAGAACTT GGGGC TTG GTTCC TTTTTTAACAACTCT TERM 1529 1277938 - 1277958 + r 80 -10.5 -3.09987 | CACATTACCACCTGT TCGACTGGA GAA TCTAGTCGA TTAGCTCCCTCTTAG SPD_1249 1278695 - 1278144 - | acetyltransferase nadE 1279766 - 1278942 - | NAD synthetase pncB 1281223 - 1279763 - | nicotinate phosphoribosyltransferase SPD_1252 1281827 - 1281339 - | hypothetical protein SPD_1253 1282026 - 1281817 - | transcriptional repressor, putative SPD_1254 1283139 - 1282411 - | hypothetical protein SPD_1255 1283877 - 1283155 - | ABC transporter, ATP-binding protein TERM 1530 1284178 - 1284140 - R 79 -9.8 -3.21938 | opp_overlap 1284140, overlap 1284147 GTAAAATTTTATTAA CAAAAAACTCTCTACAAC AAA ATAATAGAGAGTTTTCTG CTTATTAATTTTTTT TERM 1531 1284171 - 1284147 - R 82 -4.3 -5.5112 | opp_overlap 1284140, overlap 1284140 TTTATTAACAAAAAA CTCTCTACAAC AAA ATAATAGAGAG TTTTCTGCTTATTAA SPD_1256 1285107 - 1284382 - | peptidase, U32 family protein TERM 1532 1285258 - 1285239 - H 76 -4.4 -5.14563 | opp_overlap 1285253 GGGGCTAGGAAAAAA GTCTTTAA AATC TTAAAAAC GCATAGTATCAGGTA TERM 1533 1285253 - 1285301 + H 79 -10 -3.30635 | gap 1, opp_overlap 1285239 1285258, overlap 1285258 AGTCTTTAAAATCTT AAAAACGCATAGTATCAGGTATT GAAC AAT-CTTGATATTATGCGTTTTA TTGTGGGAAGATTTA TERM 1534 1285258 - 1285296 + H 100 -9.9 -4.77165 | gap 1, opp_overlap 1285258, overlap 1285253 TTAAAATCTTAAAAA CGCATAGTATCAGGTATT GAAC AAT-CTTGATATTATGCG TTTTATTGTGGGAAG TERM 1535 1285296 - 1285258 - H 74 -5.5 -4.7416 | gap 1, opp_overlap 1285258 1285253 TTAAAATCTTAAAAA CGCATAGTATCAGGTATT GAAC AAT-CTTGATATTATGCG TTTTATTGTGGGAAG SPD_1257 1285274 - 1285441 + | hypothetical protein SPD_1258 1286982 - 1285696 - | peptidase, U32 family protein TERM 1536 1285921 - 1285952 + g 72 -8.8 -3.50335 | overlap 1285926 AAACTCAACTTGGTC CCCTTCGTTAATGA CGTT TCGTTGACGAATGG TTGCTGTTTGTACCG TERM 1537 1287191 - 1287172 - H 88 -7.2 -5.1417 | overlap 1287173 CTAGAAAAGTAAAAA CCAGTATC CCAA GATACTGA CTCGTAAAAATACAT TERM 1538 1287190 - 1287173 - H 77 -8.5 -3.66876 | overlap 1287172 TAGAAAAGTAAAAAC CAGTATC CCAA GATACTG ACTCGTAAAAATACA TERM 1539 1288787 - 1288770 - g 73 -5.5 -4.55849 | overlap 1288772 CAAAAGCTAAAGAAA GAGTAGG TTAT CCTACAC AAAAACCTATTCTGT SPD_1260 1288160 - 1289338 + | type II DNA modification methyltransferase, putative TERM 1540 1289407 - 1289382 - f 82 -3.3 -5.74288 | opp_overlap 1289382 AGAAAGAACAAAAAA TGCTCTGAAAC ACTG ATTTCAAGGCA TTTTTTGTTAGTTTA TERM 1541 1289382 - 1289407 + F 80 -2.6 -5.59655 | opp_overlap 1289382 AGAAAGAACAAAAAA TGCTCTGAAA CACTGA TTTCAAGGCA TTTTTTGTTAGTTTA SPD_1261 1289597 - 1289743 + | hypothetical protein TERM 1542 1289745 - 1289770 + T 84 -3.9 -5.68039 | opp_overlap 1289748, overlap 1289749 GTGCAGAGAGATAAA TATTGGCGGTC TTCG GACTGCCTTTA TTTTTTTATCCATTT TERM 1543 1289749 - 1289766 + T 100 -9.1 -5.27709 | opp_overlap 1289748, overlap 1289745 AGAGAGATAAATATT GGCGGTC TTCG GACTGCC TTTATTTTTTTATCC SPD_1262 1290857 - 1289865 - | transcriptional regulator, AraC family protein SPD_1263 1291017 - 1292771 + | ABC transporter, ATP-binding/permease protein TERM 1544 1293636 - 1293615 - g 84 -10.3 -3.9638 | opp_overlap 1293613, overlap 1293613 TATGAAGATAAAAGA CTCTTTAGA TGCA TCTAAAGAG GGCTTGATGGAAATA SPD_1264 1292755 - 1294476 + | ABC transporter, ATP-binding protein TERM 1545 1295092 - 1295045 - g 76 -4.5 -5.08824 | gap 2, opp_overlap 1295057 1295060, overlap 1295057 GCTCTATTGAAAAAA CACTT--TGAAAAAGCAGGCATT GTAT AATGCCTACTTTTTCTTCAAATG CTCCCTTTAATCCCA SPD_1265 1294487 - 1295071 + | hypothetical protein TERM 1546 1295057 - 1295078 + F 88 -7.3 -5.08601 | opp_overlap 1295057 1295045, overlap 1295060 AAACACTTTGAAAAA GCAGGCATT GTAT AATGCCTAC TTTTTCTTCAAATGC TERM 1547 1295078 - 1295057 - f 93 -9.5 -4.62904 | opp_overlap 1295057 1295060, overlap 1295045 AAACACTTTGAAAAA GCAGGCATT GTAT AATGCCTAC TTTTTCTTCAAATGC TERM 1548 1295249 - 1295237 - g 85 -2.7 -5.72616 | ATGGATACAAAAAAA CACTT TTC AAATG GATTATATTGTGTGG TERM 1549 1295667 - 1295646 - g 71 -5.1 -4.55697 | AGCGGCAGAAACAAA GGCAATAGA AAAT CCAATTGCC AAGACCAGATACATT SPD_1266 1295071 - 1295766 + | hypothetical protein TERM 1550 1296032 - 1296056 + G 76 -6.6 -4.35474 | TCCTAAGACATATTT TTTTAATGTC AATAC GACATTAGAA TTATTATTTTATTTG SPD_1267 1295754 - 1297118 + | ABC transporter, ATP-binding protein TERM 1551 1297263 - 1297288 + T 76 -6.3 -4.56702 | opp_overlap 1297266 TATTTATAGTATTAG TAATTTCCATA TCTT TAGGGAAATTA TTTATTTACTTACCA TERM 1552 1297327 - 1297352 + T 88 -6.1 -5.66868 | opp_overlap 1297327 1297330, overlap 1297331 GAGATGAGAGATAAA TATCGGCAGTC TTCG GACTGCCTTTA TTTTTTTACTTAATT TERM 1553 1297331 - 1297348 + T 100 -11.3 -5.25976 | opp_overlap 1297330 1297327, overlap 1297327 TGAGAGATAAATATC GGCAGTC TTCG GACTGCC TTTATTTTTTTACTT TERM 1554 1297567 - 1297526 - T 100 -14.1 -4.67011 | gap 1, opp_overlap 1297526 AAGTCTATTGAAAAA TCTCCAGATTAGTGAACT CACGGAT AGTTC-CTAATCTGGAGA TTTCTTATTTGCACT TERM 1555 1297526 - 1297567 + T 100 -14.1 -4.57581 | gap 1, opp_overlap 1297526 AAGTCTATTGAAAAA TCTCCAGATTAGTGAACT CACGGAT AGTTC-CTAATCTGGAGA TTTCTTATTTGCACT TERM 1556 1297931 - 1297917 - T 93 -10 -4.14243 | opp_overlap 1297917 GAGCTTAGGCTAAAA GAGTCC ACT GGACTC TTTTACTCCGTCCCA TERM 1557 1297917 - 1297931 + T 100 -10 -4.2828 | opp_overlap 1297917 GAGCTTAGGCTAAAA GAGTCC ACT GGACTC TTTTACTCCGTCCCA SPD_1268 1298367 - 1297906 - | hypothetical protein SPD_1269 1298652 - 1298440 - | hypothetical protein SPD_1270 1298966 - 1298661 - | hypothetical protein TERM 1558 1298988 - 1298966 - G 78 -10.7 -3.06261 | opp_overlap 1298965 1298964 TTTCAACTGGGAACA TCTCCATCT TTCTC AGATGGAGA CTCTTCCTCAAAAAG SPD_1271 1299147 - 1298953 - | hypothetical protein TERM 1559 1299337 - 1299304 - R 86 -8.3 -4.82667 | opp_overlap 1299308, overlap 1299308 TCACTATACTAAAAA GAAAGTCCTCATTTC AATA GAAATCACGACTTTC TGATAAATTTATTTT SPD_1272 1299667 - 1299317 - | IS66 family Orf2 SPD_1273 1299887 - 1299648 - | IS66 family Orf1 TERM 1560 1299971 - 1300000 + r 74 -3.5 -5.252 | opp_overlap 1299974, overlap 1299972 1299974 TCATTATATATATCA AAAGACCGCAGTT TGAA AACTACGGTCTAA TTTTTTGTCCAAATG TERM 1561 1299972 - 1299999 + r 70 -7 -3.74397 | opp_overlap 1299974, overlap 1299971 1299974 CATTATATATATCAA AAGACCGCAGTT TGAA AACTACGGTCTA ATTTTTTGTCCAAAT TERM 1562 1299974 - 1299997 + r 81 -9.6 -3.44801 | opp_overlap 1299974, overlap 1299972 1299971 TTATATATATCAAAA GACCGCAGTT TGAA AACTACGGTC TAATTTTTTGTCCAA TERM 1563 1299997 - 1299974 - R 100 -11.8 -4.41353 | opp_overlap 1299974 1299972 1299971 TTATATATATCAAAA GACCGCAGTT TGAA AACTACGGTC TAATTTTTTGTCCAA guaA 1301699 - 1300137 - | bifunctional GMP synthase/glutamine amidotransferase protein TERM 1564 1302160 - 1302148 - g 81 -2.7 -5.60993 | overlap 1302149 TTTCCTACAAAAAAA CCATT CCC AATGA GCAAGAAGTTGCCAA TERM 1565 1302320 - 1302297 - g 81 -5.4 -5.07053 | AAGGACTTTAAAAAA GAAGAAATCA CCAG TCATTTCTTC CAAACCTTGCAAAAA SPD_1275 1301841 - 1302539 + | transcriptional regulator, GntR family protein TERM 1566 1302553 - 1302577 + T 93 -5.7 -5.98675 | opp_overlap 1302555, overlap 1302555 AGATTACCACGCAAA AACTCTCTGTC ACG GACAAAGAGTC TTTTTTATTTTTCTA TERM 1567 1302555 - 1302575 + T 84 -8.3 -4.585 | opp_overlap 1302555, overlap 1302553 ATTACCACGCAAAAA CTCTCTGTC ACG GACAAAGAG TCTTTTTTATTTTTC TERM 1568 1302575 - 1302555 - T 100 -10.5 -4.68994 | opp_overlap 1302555 1302553 ATTACCACGCAAAAA CTCTCTGTC ACG GACAAAGAG TCTTTTTTATTTTTC SPD_1276 1303478 - 1302582 - | hypothetical protein SPD_1277 1304425 - 1303487 - | hypothetical protein cppA 1305147 - 1304422 - | C3-degrading proteinase SPD_1279 1305866 - 1305231 - | GDSL-like lipase/acylhydrolase, putative SPD_1280 1306695 - 1305868 - | Cof family protein SPD_1281 1307052 - 1306717 - | hypothetical protein SPD_1282 1307565 - 1307053 - | hypothetical protein SPD_1283 1307781 - 1307659 - | hypothetical protein SPD_1284 1307857 - 1307970 + | hypothetical protein def 1308294 - 1308905 + | peptide deformylase TERM 1569 1308912 - 1308929 + F 74 -5.5 -4.75289 | opp_overlap 1308912 1308907 1308913, overlap 1308913 CTTGAATAAAGAAAA TCCCGTT GCAA GACGGGG TTTTGTGTTATAATA TERM 1570 1309051 - 1309022 - g 71 -5.1 -4.56113 | gap 1, overlap 1309023 1309024 AATACAGGAAACAAA CTCTACCTCCAAGA AGA TCTCCGAGGTA-AG AATGTTGAGAAAGTC TERM 1571 1309110 - 1309090 - g 70 -5.4 -4.38744 | overlap 1309092 AGCTACAGAAAAGAA GGTGTCCA TTTCT TGGACATC AAAAAAATCTCTCTC TERM 1572 1309130 - 1309118 - g 83 -3.4 -5.58454 | overlap 1309120 TGGACATCAAAAAAA TCTC TCTCT GAGA TGACTGAAGGTGCTG SPD_1286 1308950 - 1309678 + | TrmH family RNA methyltransferase group 3 TERM 1573 1309706 - 1309683 - T 90 -8.2 -5.35459 | opp_overlap 1309683 ATAGACTATAAAAAA GTTTCCAGTC ATCT GATTGGAAAC TTTTTTATGATTAAC TERM 1574 1309683 - 1309706 + T 100 -10.4 -5.37345 | opp_overlap 1309683 ATAGACTATAAAAAA GTTTCCAGTC ATCT GATTGGAAAC TTTTTTATGATTAAC trxB 1310628 - 1309717 - | thioredoxin-disulfide reductase SPD_1288 1310918 - 1310694 - | hypothetical protein TERM 1575 1310943 - 1310986 + r 83 -10.6 -3.22886 | gap 1, opp_overlap 1310949 1310954, overlap 1310949 1310954 CATTTCTATCTTTTT TAAAGAGTAAACTCAGCTAGT CCA ACTAACTGAGTTTTC-CTTTA TCTATTATATCAAAT TERM 1576 1310949 - 1310981 + r 83 -10.7 -3.14751 | opp_overlap 1310949 1310954, overlap 1310943 1310954 TATCTTTTTTAAAGA GTAAACTCAGCTAGT CCA ACTAACTGAGTTTTC CTTTATCTATTATAT TERM 1577 1310981 - 1310949 - R 93 -12.9 -3.34715 | opp_overlap 1310949 1310943 1310954, overlap 1310954 TATCTTTTTTAAAGA GTAAACTCAGCTAGT CCA ACTAACTGAGTTTTC CTTTATCTATTATAT TERM 1578 1310976 - 1310954 - R 93 -11.4 -4.00532 | opp_overlap 1310954 1310949 1310943, overlap 1310949 TTTTTAAAGAGTAAA CTCAGCTAGT CCA ACTAACTGAG TTTTCCTTTATCTAT TERM 1579 1310954 - 1310976 + r 100 -9.2 -4.66057 | opp_overlap 1310949 1310954, overlap 1310949 1310943 TTTTTAAAGAGTAAA CTCAGCTAGT CCA ACTAACTGAG TTTTCCTTTATCTAT SPD_1289 1311739 - 1310996 - | amino acid ABC transporter, ATP-binding protein SPD_1290 1312539 - 1311739 - | amino acid ABC transporter, permease protein TERM 1580 1312695 - 1312669 - R 76 -9.7 -2.95388 | opp_overlap 1312668 1312665 CAGGGAAGTTATATA TTTTATCTATC AAAGA GATAGATAAAA ACTATTTCAGTCCCA SPD_1291 1313053 - 1312697 - | hypothetical protein ogt 1313577 - 1313047 - | methylated-DNA--protein-cysteine S-methyltransferase SPD_1293 1314071 - 1313577 - | acetyltransferase, GNAT family protein SPD_1294 1314206 - 1314652 + | hypothetical protein SPD_1295 1314649 - 1315296 + | hemolysin TERM 1581 1315321 - 1315301 - T 79 -5.5 -5.13473 | opp_overlap 1315301 ATTACATGTAAAAAA GTTGAGA AATTCAA TCTCAAC TTTTTTCTTTACACA TERM 1582 1315301 - 1315321 + T 86 -5.5 -5.63517 | opp_overlap 1315301 ATTACATGTAAAAAA GTTGAGA AATTCAA TCTCAAC TTTTTTCTTTACACA SPD_1296 1315898 - 1315317 - | glutamine amidotransferase subunit PdxT SPD_1297 1316774 - 1315899 - | pyridoxine biosynthesis protein TERM 1583 1316672 - 1316656 - G 73 -10.1 -2.80994 | opp_overlap 1316656 TCCAAGGCCATCACA GCTGCCG CAC CAGCAGC TTCTGCGATACGAGC TERM 1584 1316724 - 1316742 + g 82 -3.9 -5.38326 | gap 1 CATAATAACACCACC CTTGAGCA TCTG TGC-CAAG TTTTTATTTAGTTCA TERM 1585 1316885 - 1316915 + r 77 -9.8 -3.0089 | opp_overlap 1316886, overlap 1316882 ACAGATTAGCTAAAA ACTATCTGACCTTA ACT TAAGGCCAGATAGC TCATTCATTTTTATT TERM 1586 1316914 - 1316886 - R 100 -15.5 -4.69664 | opp_overlap 1316885 1316882 CAGATTAGCTAAAAA CTATCTGACCTTA ACT TAAGGCCAGATAG CTCATTCATTTTTAT nox 1318305 - 1316926 - | NADH oxidase SPD_1299 1318447 - 1318602 + | hypothetical protein TERM 1587 1318709 - 1318689 - g 71 -4.8 -4.56775 | overlap 1318691 ATCTTTCTCCAAAAA TCCTTTGA CTTGC TCAAAGAA CTTGAATACCGCTTC SPD_1300 1318599 - 1319522 + | thiamine biosynthesis protein ApbE, putative TERM 1588 1320139 - 1320125 - g 84 -10 -3.94811 | opp_overlap 1320123 AAGATTACTGAGAAA TTGCGC AAT GCGCAA GAATTGCTTCGCAAA SPD_1301 1319582 - 1320187 + | NADPH-dependent FMN reductase SPD_1302 1320205 - 1321449 + | oxidoreductase, putative TERM 1589 1321462 - 1321478 + T 100 -10.9 -5.00616 | TAATGATAGTTTTTA GGAACCA TTA TGGTTCC TTTTTTAGCGAAAAA TERM 1590 1321519 - 1321495 - T 84 -6.5 -5.08824 | opp_overlap 1321495 1321493 TTTTTAGCGAAAAAA GACTAGCAA ACACAAA CTGCTAGTC TCTTTGTTATCGTTT SPD_1303 1321823 - 1321566 - | hypothetical protein glyS 1323901 - 1321865 - | glycyl-tRNA synthetase subunit beta TERM 1591 1323786 - 1323813 + g 83 -6.2 -5.07053 | opp_overlap 1323787, overlap 1323787 ATGGCTTCAAAAGAC AGGCGGTTTTCC TTGA GGAAGGCTGCCA TTTTTTCGCCTAGTT TERM 1592 1323787 - 1323812 + g 79 -9.7 -3.63148 | opp_overlap 1323787, overlap 1323786 TGGCTTCAAAAGACA GGCGGTTTTCC TTGA GGAAGGCTGCC ATTTTTTCGCCTAGT glyQ 1325078 - 1324161 - | glycyl-tRNA synthetase subunit alpha SPD_1306 1325661 - 1325272 - | hypothetical protein SPD_1307 1326032 - 1325643 - | hypothetical protein TERM 1593 1325948 - 1325938 - G 74 -4 -5.02074 | opp_overlap 1325927 1325923 1325938 TCATTCTTTAAAAAA GATT GAT AATC TTTCAACTTTTCAGT TERM 1594 1326129 - 1326073 - R 82 -7.5 -4.56736 | gap 2, opp_overlap 1326086, overlap 1326081 ACTGAATAAGCAAAA GAACCACA-T-CTGACAATCCTAGGTT GATTT AACCTAGGGGCGTCAGAAACGCGGTTC CACCCTAATTTATTA TERM 1595 1326119 - 1326081 - R 83 -11.1 -3.11158 | opp_overlap 1326086, overlap 1326073 AGCAAAAGAACCACA TCTGACAATCCTAGGTT GATTT AACCTAGGGGCGTCAGA AACGCGGTTCCACCC SPD_1308 1327147 - 1326305 - | oxidoreductase, aldo/keto reductase family protein TERM 1596 1326338 - 1326354 + g 81 -6.6 -4.72486 | opp_overlap 1326326 AACTCGTGGAGCACC CGATTG AACAG CAATCG TTTTTAAGGTTTCTC TERM 1597 1327249 - 1327222 - R 84 -6.4 -5.02476 | opp_overlap 1327225 ATATTCTGTAAAAAA TAAGTCTGTCAA ATAT CTAACAGACCTA TTTTTTCTTGCTTAT pgdA 1328703 - 1327261 - | peptidoglycan GlcNAc deacetylase SPD_1310 1329132 - 1328887 - | hypothetical protein SPD_1311 1329479 - 1330456 + | oxidoreductase, Gfo/Idh/MocA family protein TERM 1598 1330825 - 1330796 - g 76 -10.8 -2.60776 | opp_overlap 1330796 1330795, overlap 1330795 1330794 AACGTCTTAAAAAGG GGCCAGAAATTC TGATTG GAACTCCTGGCC GTATCTTTGAACTCA TERM 1599 1330888 - 1330856 - g 80 -2 -5.58209 | opp_overlap 1330879 1330880, overlap 1330857 1330860 1330878 1330880 TTAAACTTAAAAAAA TCAAGATGATGAAT GTGGA AACCATCATCCTGG ATGAATTTGACCAAT SPD_1312 1330453 - 1331535 + | ATP-dependent RNA helicase, DEAD/DEAH box family protein TERM 1600 1331545 - 1331571 + T 100 -11.7 -5.24531 | opp_overlap 1331557 AAATAAAGCCCCATT GCTCTATACAC ATCCA GTGTATGGAGC TTTTTTATAAGCAAT TERM 1601 1332195 - 1332227 + T 100 -10 -4.76874 | overlap 1332190 ATTAATTTATCCGAA GGATTTAGTTCTGT ATTGC ACAGGGCTAAGTCC TTTTAGTTTTATCTT TERM 1602 1333505 - 1333465 - T 100 -17.2 -5.19328 | opp_overlap 1333462 ATTTCATAATAAAAA CACCCCAAAAGTTAGA TTTTTTCTG TCTAACTTTTGGGGTG CAGTTCACTTGTCTT SPD_1316 1333848 - 1333510 - | hypothetical protein SPD_1317 1334111 - 1333971 - | hypothetical protein TERM 1603 1334209 - 1334221 + r 71 -7.7 -3.58905 | GTCGTATAGATGTTA CTGAC TTC GTCAG TTCTATCTACAACCT TERM 1604 1334447 - 1334427 - R 100 -10.5 -5.52909 | opp_overlap 1334427 CAATATCTAAAAAAA GAACCTTGC CAA GCAAGATTC TTTTAGTGTCTAACT TERM 1605 1334427 - 1334447 + r 83 -8.3 -4.39568 | opp_overlap 1334427 CAATATCTAAAAAAA GAACCTTGC CAA GCAAGATTC TTTTAGTGTCTAACT tuf 1335691 - 1334495 - | elongation factor Tu SPD_1319 1336156 - 1336034 - | hypothetical protein TERM 1606 1336568 - 1336546 - R 100 -9.2 -5.25735 | opp_overlap 1336546 CTAAAAAATCAAAAA GAGAGAACCA GTC TGATCCTCTC TTACTTATAGATGGT SPD_1320 1337482 - 1336613 - | glycerol uptake facilitator protein, putative TERM 1607 1337048 - 1337071 + g 74 -6 -4.40804 | opp_overlap 1337038, overlap 1337052 ATTAATCAAACCATT GACAGTTGCT GCAT AGCGACTTTC TTTTGTACCATGGTC TERM 1608 1337052 - 1337067 + g 75 -5.4 -4.77775 | overlap 1337048 ATCAAACCATTGACA GTTGCT GCAT AGCGAC TTTCTTTTGTACCAT TERM 1609 1337685 - 1337650 - R 82 -8.5 -4.07687 | gap 2, opp_overlap 1337650 1337661 1337682, overlap 1337636 1337661 ACCTCGTTCTCAAAA CCAGGAAAAAAGCCCAC ATCT GTGAGCTT-TT-CCTGG TTCCTAGATTCTAAA TERM 1610 1337676 - 1337661 - R 85 -6.8 -5.25656 | opp_overlap 1337661 1337650, overlap 1337650 AAAACCAGGAAAAAA GCCCAC ATCT GTGAGC TTTTCCTGGTTCCTA SPD_1321 1338314 - 1337706 - | cell wall surface anchor family protein SPD_1322 1339378 - 1338272 - | hypothetical protein TERM 1611 1338689 - 1338712 + gr 86 -4.6 -5.4251 | overlap 1338690 AGTATAATATTTTCC GTCAGTAGTA GTCA TGCTACTGAG TTTTTTATCTGTGAC TERM 1612 1338690 - 1338711 + gr 75 -8.1 -3.84422 | overlap 1338689 GTATAATATTTTCCG TCAGTAGTA GTCA TGCTACTGA GTTTTTTATCTGTGA SPD_1323 1339743 - 1339489 - | hypothetical protein SPD_1324 1340400 - 1340101 - | IS630-Spn1, transposase Orf2 pgm 1341179 - 1342897 + | phosphoglucomutase/phosphomannomutase family protein bta 1343008 - 1343355 + | bacterocin transport accessory protein TERM 1613 1343384 - 1343430 + T 75 -8.4 -3.71848 | gap 1, opp_overlap 1343389, overlap 1343389 AAGTCTTAAAATCAC AAAAACGCATAATGT-AAGGT GCAAAA ACCTTGATATTATGCGTTTTA TTGTTCCTAAAACAG TERM 1614 1343425 - 1343389 - T 83 -6.1 -5.09245 | gap 1, opp_overlap 1343389 1343384 TTAAAATCACAAAAA CGCATAATGT-AAGGT GCAAAA ACCTTGATATTATGCG TTTTATTGTTCCTAA TERM 1615 1343389 - 1343425 + T 90 -8.3 -4.92757 | gap 1, opp_overlap 1343389, overlap 1343384 TTAAAATCACAAAAA CGCATAATGT-AAGGT GCAAAA ACCTTGATATTATGCG TTTTATTGTTCCTAA TERM 1616 1343614 - 1343590 - T 100 -9.4 -6.00086 | opp_overlap 1343590, overlap 1343611 AGATTACAAAAAAAA CTACGTTTTG CTAAT CAAAACGCAG TTTCAGCCACTATTT aatB 1344470 - 1343634 - | amino acid ABC transporter, amino acid-binding protein SPD_1329 1345112 - 1344483 - | amino acid ABC transporter, ATP-binding protein SPD_1330 1345763 - 1345122 - | amino acid ABC transporter, permease protein TERM 1617 1345207 - 1345196 - G 75 -5.8 -4.67692 | overlap 1345198 TCAAAATCAAATAAA TGGC TCCT GCCA AGAACATAGGAACTA TERM 1618 1345543 - 1345529 - G 72 -8.6 -3.51232 | GGCGGTCTAAACGAA TCCCAA TAC TTGGGA GCACATAATAGATAA SPD_1331 1347138 - 1345909 - | TPR domain-containing protein TERM 1619 1346030 - 1346044 + g 72 -8.6 -3.52093 | AGATAGATATAGTGT TCCAGA AAT TCTGGA TTGTCCTTCAAATCT SPD_1332 1348294 - 1347128 - | hypothetical protein TERM 1620 1348120 - 1348104 - G 77 -6.5 -4.53119 | AAATAATATAACAAA CCAGACA AAA TGACTGG CAACATCACAACTGC SPD_1333 1348438 - 1349451 + | hypothetical protein TERM 1621 1349488 - 1349466 - T 85 -6.4 -5.38321 | opp_overlap 1349466 AAACACCATAAAAAA TGAACTTG GTATTTT CAAGTTCA TTTTTTCTTATAGTC TERM 1622 1349466 - 1349488 + T 93 -7.1 -5.58179 | opp_overlap 1349466 AAACACCATAAAAAA TGAACTTGG TATTT TCAAGTTCA TTTTTTCTTATAGTC atpC 1349915 - 1349496 - | F0F1 ATP synthase subunit epsilon atpD 1351332 - 1349926 - | F0F1 ATP synthase subunit beta TERM 1623 1350996 - 1351008 + g 74 -9.1 -3.48276 | overlap 1350993 TTTTATGAATTGGCT GACGC TCT GCGTC TTCTGTAAAAGGAGC TERM 1624 1351297 - 1351287 - G 70 -3.2 -4.86731 | CTGCTGCAAACAAAA CGTC TAC AACG GGACCGATAACCTGA atpG 1352296 - 1351418 - | F0F1 ATP synthase subunit gamma TERM 1625 1352164 - 1352140 - G 79 -8.6 -4.10657 | GGATATCTGTCAAAA GTTTACGCAC TTTCT GAGCGTAAAC TTGGAAGTTGCGAGC atpA 1353817 - 1352312 - | F0F1 ATP synthase subunit alpha TERM 1626 1353242 - 1353256 + g 74 -4.3 -4.86621 | opp_overlap 1353242 1353249, overlap 1353249 CGCGACGTAGATACA GATCA TATCT TGATC TTTTTGGTTCAAGAT TERM 1627 1353426 - 1353412 - G 77 -10 -3.30243 | opp_overlap 1353411 1353412 1353414, overlap 1353417 ACTTACGTTGCATAA CACCAG GAG CTGGTG CTTCTACTGGACGAG TERM 1628 1353412 - 1353426 + g 72 -10 -2.64099 | opp_overlap 1353412 1353417, overlap 1353411 1353414 ACTTACGTTGCATAA CACCAG GAG CTGGTG CTTCTACTGGACGAG atpH 1354368 - 1353832 - | F0F1 ATP synthase subunit delta atpF 1354862 - 1354368 - | F0F1 ATP synthase subunit B atpB 1355592 - 1354876 - | F0F1 ATP synthase subunit A atpE 1355827 - 1355627 - | F0F1 ATP synthase subunit C SPD_1342 1356909 - 1355902 - | IS1239, transposase, putative TERM 1629 1357110 - 1357091 - R 83 -7.9 -4.76274 | opp_overlap 1357091 GAAAGCAACACAAAA TCCGAGA GGGGAA TCTCGGA TTAATAGATAGAGAG SPD_1343 1357782 - 1357354 - | acetyltransferase, GNAT family protein SPD_1344 1358277 - 1357870 - | hypothetical protein TERM 1630 1357921 - 1357939 + g 72 -10.4 -2.61383 | overlap 1357920 ACTAGCCGCAGGTTG CTCAAAAC ACT GTTTTGAG GTTGTAGATGAAACT TERM 1631 1357966 - 1357984 + g 72 -10.4 -2.61383 | opp_overlap 1357965, overlap 1357965 AACTGACGAAGTTAG CTCAAAAC ACT GTTTTGAG GTTGTAGATGAAACT TERM 1632 1358010 - 1357998 - G 73 -7.7 -3.83205 | AGGTTGTAGATGAAA CTGAC GAA GTCAG CTCAAAACATAGTTT TERM 1633 1358011 - 1358029 + g 72 -10.4 -2.61383 | opp_overlap 1358010, overlap 1358010 AACTGACGAAGTCAG CTCAAAAC ATA GTTTTGAG GTTGTAGATGAAACT TERM 1634 1358056 - 1358074 + g 72 -10.4 -2.61383 | opp_overlap 1358055, overlap 1358055 AACTGACGAAGTTAG CTCAAAAC ACT GTTTTGAG GTTGTAGATGAAACT TERM 1635 1358100 - 1358088 - G 73 -7.7 -3.83205 | AGGTTGTAGATGAAA CTGAC GAA GTCAG CTCAAAACATAGTTT TERM 1636 1358101 - 1358119 + g 72 -10.4 -2.61383 | opp_overlap 1358100, overlap 1358100 AACTGACGAAGTCAG CTCAAAAC ATA GTTTTGAG GTTGTAGATGAAACT TERM 1637 1358146 - 1358164 + g 72 -10.4 -2.61383 | opp_overlap 1358145, overlap 1358145 AACTGACGAAGTTAG CTCAAAAC ACT GTTTTGAG GTTGTAAATGAAACT TERM 1638 1358190 - 1358178 - G 75 -7.7 -4.06055 | AGGTTGTAAATGAAA CTGAC AAA GTCAG TAACCATACATACGG TERM 1639 1358293 - 1358262 - G 93 -10.2 -4.88222 | gap 1, opp_overlap 1358262 AGCAAAATGGAAAAA GGAGTGAGTGAAGCA CAT CGCCTC-CCCACTCC TTTTTCTGTTTTTAG TERM 1640 1358262 - 1358293 + g 87 -5.1 -5.36364 | gap 1, opp_overlap 1358262 AGCAAAATGGAAAAA GGAGTGAGTGAAGC ACATC GCCTC-CCCACTCC TTTTTCTGTTTTTAG greA 1358787 - 1358305 - | transcription elongation factor GreA TERM 1641 1358403 - 1358414 + g 73 -7.2 -4.06055 | TGCCAATCAAGGCCT GCCC AATT GGGC TTTCATTTGAAACCT TERM 1642 1358564 - 1358576 + g 79 -3.3 -5.38054 | TCGCTATTGACGATT TCAGC ATA GCGGA TTTTTGTTTCTAAGC TERM 1643 1358764 - 1358774 + g 78 -4 -5.28826 | CTTTTCCTCAAGGGT CATA GGA TATG TTTTTTCTGCCATTT TERM 1644 1358822 - 1358851 + r 72 -8.1 -3.36578 | opp_overlap 1358813 1358822 1358827, overlap 1358813 1358827 ATAATATTTTCTAAA GAAAATTATGTGA AGTA TCACATAATTTTA GTTTGTTTAGTTTAA TERM 1645 1358851 - 1358822 - R 73 -8.1 -3.57883 | opp_overlap 1358813 1358822 1358827, overlap 1358813 1358827 ATAATATTTTCTAAA GAAAATTATGTGA AGTA TCACATAATTTTA GTTTGTTTAGTTTAA TERM 1646 1358846 - 1358827 - R 90 -8 -4.87133 | opp_overlap 1358827 1358822, overlap 1358822 ATTTTCTAAAGAAAA TTATGTGA AGTA TCACATAA TTTTAGTTTGTTTAG TERM 1647 1358827 - 1358846 + r 86 -8 -4.72863 | opp_overlap 1358822 1358827, overlap 1358822 ATTTTCTAAAGAAAA TTATGTGA AGTA TCACATAA TTTTAGTTTGTTTAG SPD_1346 1360513 - 1358858 - | hypothetical protein SPD_1347 1361088 - 1360594 - | acetyltransferase, GNAT family protein SPD_1348 1361549 - 1361085 - | acetyltransferase, GNAT family protein TERM 1648 1361435 - 1361405 - G 70 -8.5 -3.35996 | gap 1, opp_overlap 1361410, overlap 1361409 1361410 CATCCCTAGCTAGAA GAAAGGTATCCGCA CACT TACGGATA-CTTTC TTCTAAAATATGGGA TERM 1649 1361432 - 1361409 - G 74 -6 -4.33417 | opp_overlap 1361410, overlap 1361405 1361410 CCTAGCTAGAAGAAA GGTATCCGCA CACT TACGGATACT TTCTTCTAAAATATG TERM 1650 1361431 - 1361410 - G 73 -9.5 -3.19568 | opp_overlap 1361410, overlap 1361409 1361405 CTAGCTAGAAGAAAG GTATCCGCA CACT TACGGATAC TTTCTTCTAAAATAT TERM 1651 1361410 - 1361431 + g 78 -7.3 -4.32579 | opp_overlap 1361410 1361409 1361405 CTAGCTAGAAGAAAG GTATCCGCA CACT TACGGATAC TTTCTTCTAAAATAT murC 1362893 - 1361559 - | UDP-N-acetylmuramate--L-alanine ligase TERM 1652 1361683 - 1361713 + g 80 -6.2 -4.68384 | AGTGGAGAAACATTT TCAACAGTAATCAC TTG GTGTTTTTTGTTGA TTTTGTTGGCTAGGT SPD_1350 1363521 - 1362904 - | hypothetical protein SPD_1351 1366667 - 1363569 - | Snf2 family protein TERM 1653 1365478 - 1365448 - G 70 -7.7 -3.65199 | opp_overlap 1365456 AAGCCCGCAGCCAAA CAGACTTGGAAAA TTCTT TCTTCTAAGTCTG CGTCACTTGAAAAGG TERM 1654 1366361 - 1366375 + g 79 -10 -3.54307 | opp_overlap 1366353 1366354 CCAAAAACTTGCCAC CCAAGG TCA CCTTGG TTTCAACGGCCTCTT TERM 1655 1366718 - 1366756 + r 77 -6.1 -4.70879 | gap 1, opp_overlap 1366702 1366720 1366722, overlap 1366719 1366722 ATTTTCGCCTATGAA AATAGCCTTCTAGGAAGA CTTT TCT-CCTAGAAGGCTGGA TTTTTAACATTTGGC TERM 1656 1366719 - 1366755 + r 81 -9.6 -3.41804 | gap 1, opp_overlap 1366702 1366720 1366722, overlap 1366718 1366722 TTTTCGCCTATGAAA ATAGCCTTCTAGGAAGA CTTT TCT-CCTAGAAGGCTGG ATTTTTAACATTTGG TERM 1657 1366754 - 1366720 - R 100 -10.9 -4.25104 | gap 1, opp_overlap 1366719 1366718 1366722, overlap 1366702 1366722 TTTCGCCTATGAAAA TAGCCTTCTAGGAAGA CTTT TCT-CCTAGAAGGCTG GATTTTTAACATTTG TERM 1658 1366722 - 1366752 + r 89 -13.5 -2.85019 | gap 1, opp_overlap 1366720 1366722, overlap 1366719 1366718 TCGCCTATGAAAATA GCCTTCTAGGAAGA CTTT TCT-CCTAGAAGGC TGGATTTTTAACATT TERM 1659 1366752 - 1366722 - R 100 -13.5 -3.73042 | gap 1, opp_overlap 1366722 1366719 1366718, overlap 1366720 TCGCCTATGAAAATA GCCTTCTAGGAAGA CTTT TCT-CCTAGAAGGC TGGATTTTTAACATT SPD_1352 1367926 - 1366760 - | aminotransferase, class II SPD_1353 1369028 - 1367934 - | cystathionine gamma-synthase TERM 1660 1369146 - 1369128 - R 71 -3.1 -5.06585 | opp_overlap 1369128 CAAACTATATAAAAA GGGAG TTTTTCCTG CTCCC TTTAATAGACTATAA SPD_1354 1369338 - 1369186 - | hypothetical protein SPD_1355 1369909 - 1369457 - | hypothetical protein TERM 1661 1370993 - 1370955 - R 77 -6.1 -4.77165 | opp_overlap 1370955, overlap 1370950 CTTCCTATAACAAAA CGCATAACATCTAGGAT TTTAT ATACCTGATATTATGCG TTTTTAAGCACAAAG aliB 1372999 - 1371041 - | oligopeptide ABC transporter, oligopeptide-binding protein AliB SPD_1358 1374824 - 1373202 - | polysaccharide biosynthesis protein, putative TERM 1662 1375852 - 1375873 + G 72 -9.5 -3.02511 | gap 1 TTGCTGCTGGACTTG CTTGTCTCCG TCT CGGAG-CAAG TCTTGAGGACATCAA murE 1374930 - 1376375 + | UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase TERM 1663 1376379 - 1376420 + T 79 -8.4 -4.00042 | gap 1, opp_overlap 1376379 1376388, overlap 1376388 1376412 AATTATTTATAAGAA TA-GAAAAAATCAAGGG AAAATGAAA CCCTTGATTTTTTCCTA TTATTTAGTAAAAAC TERM 1664 1376420 - 1376379 - T 75 -8.4 -3.83226 | gap 1, opp_overlap 1376379 1376388 1376412, overlap 1376388 AATTATTTATAAGAA TA-GAAAAAATCAAGGG AAAATGAAA CCCTTGATTTTTTCCTA TTATTTAGTAAAAAC TERM 1665 1376388 - 1376410 + T 80 -4.9 -5.31545 | opp_overlap 1376379 1376388, overlap 1376379 TAAGAATAGAAAAAA TCAAGGG AAAATGAAA CCCTTGA TTTTTTCCTATTATT TERM 1666 1376410 - 1376388 - T 83 -4.9 -5.55695 | opp_overlap 1376388 1376379, overlap 1376379 TAAGAATAGAAAAAA TCAAGGG AAAATGAAA CCCTTGA TTTTTTCCTATTATT SPD_1360 1376615 - 1376421 - | hypothetical protein SPD_1362 1377860 - 1377348 - | hypothetical protein TERM 1667 1377894 - 1377881 - R 85 -4.5 -5.61596 | opp_overlap 1377881, overlap 1377885 ACTCCTAGAAAAAAA GGAGC CGAA ACTCC TTTCGATATAAGGCA ppaC 1378882 - 1377947 - | putative manganese-dependent inorganic pyrophosphatase TERM 1668 1378066 - 1378086 + g 79 -8.3 -4.02534 | CTTCGACCTTGTCCA TATTGGCAC CAA GAGCCAATA TTTCTGAGTTTGAGT TERM 1669 1378966 - 1378947 - R 79 -10 -3.32997 | TTTTGACAAAGGTAA GAGGAGTC AAAG GACTCCCC ACGATTCTTCAAAAT SPD_1364 1379252 - 1378953 - | hypothetical protein SPD_1365 1379991 - 1379242 - | hypothetical protein SPD_1366 1380404 - 1380045 - | hypothetical protein SPD_1367 1381806 - 1380406 - | Cof family protein/peptidyl-prolyl cis-trans isomerase, cyclophilin type TERM 1670 1380541 - 1380531 - G 81 -6.8 -4.77157 | CTAACTGACCAAAAA CCGT GTG ACGG CGGTCTAGGTGAGGT TERM 1671 1382021 - 1382052 + r 86 -8 -4.67697 | opp_overlap 1382030, overlap 1382030 CTCATTTCAAAGCTT GTGAAAAAAGACCC GTTG GGGTCTTAATTCGC TTTCTTGTTTTCAAG TERM 1672 1382030 - 1382043 + r 72 -8.1 -3.44891 | opp_overlap 1382030, overlap 1382021 AAGCTTGTGAAAAAA GACCC GTTG GGGTC TTAATTCGCTTTCTT TERM 1673 1382043 - 1382030 - R 90 -8.1 -5.01732 | opp_overlap 1382021 1382030 AAGCTTGTGAAAAAA GACCC GTTG GGGTC TTAATTCGCTTTCTT TERM 1674 1382096 - 1382079 - R 74 -5.5 -4.74801 | opp_overlap 1382081, overlap 1382081 CAAGCTCATGAAAAA GAGACCC AACC GGGTCTT TTCTTTAATCTTCGT TERM 1675 1382094 - 1382081 - R 79 -8.1 -3.98658 | opp_overlap 1382081, overlap 1382079 AGCTCATGAAAAAGA GACCC AACC GGGTC TTTTCTTTAATCTTC TERM 1676 1382081 - 1382094 + r 90 -8.1 -4.99568 | opp_overlap 1382079 1382081 AGCTCATGAAAAAGA GACCC AACC GGGTC TTTTCTTTAATCTTC rpsR 1382340 - 1382101 - | 30S ribosomal protein S18 ssb 1382842 - 1382372 - | single-strand DNA-binding protein rpsF 1383144 - 1382854 - | 30S ribosomal protein S6 TERM 1677 1383256 - 1383235 - R 74 -3.1 -5.34555 | overlap 1383237 TTATACTAGAAAAAA TTTTTTTAC GCAA GTAAAAACA CTAGAATTCGAAAAA TERM 1678 1383273 - 1383285 + r 74 -6.2 -4.50841 | opp_overlap 1383273, overlap 1383268 TAGAATTCGAAAAAA CGCC ACATG GGCG TTTTCCTGTTCTTAT TERM 1679 1383285 - 1383273 - R 83 -6.2 -5.11033 | opp_overlap 1383268 1383273 TAGAATTCGAAAAAA CGCC ACATG GGCG TTTTCCTGTTCTTAT asnC 1384640 - 1383297 - | asparaginyl-tRNA synthetase SPD_1372 1385024 - 1384659 - | glyoxalase family protein aspC 1386204 - 1385017 - | aspartate aminotransferase SPD_1374 1386632 - 1386201 - | hypothetical protein TERM 1680 1386266 - 1386256 - G 81 -5.4 -5.00895 | TCTACTAGATAAAAA TCAG ATC CTGA CTTAACTTCCCAGAT TERM 1681 1386425 - 1386443 + g 85 -8.9 -4.15044 | opp_overlap 1386427 CTTTACCAATCAGGA CAGCAAG CGCTT CTTGCTG TTTATTACGACCAAG SPD_1375 1387010 - 1387558 + | hypothetical protein TERM 1682 1387595 - 1387612 + T 100 -9.1 -5.38958 | opp_overlap 1387595 TCTAAATCAATTATA GCCACCT AATA GGGTGGC TTTTTATTTCTCAAT TERM 1683 1387686 - 1387665 - T 100 -10.9 -5.81412 | opp_overlap 1387665 GCCATCCAAAAAAAA CCTTGAGCG TTAC CACTCAAGG TTTTTAGCAGTCTTT TERM 1684 1387665 - 1387686 + T 89 -8.7 -4.62904 | opp_overlap 1387665 GCCATCCAAAAAAAA CCTTGAGCG TTAC CACTCAAGG TTTTTAGCAGTCTTT SPD_1376 1395451 - 1387796 - | G5 domain-containing protein TERM 1685 1387999 - 1388017 + g 77 -9.6 -3.52073 | overlap 1387990 1387987 GTTCTGGAACCGCTG GTACTGGT TTA ACCGGTAC TTCTGGTGTTGAAAC TERM 1686 1388046 - 1388072 + g 86 -10.2 -3.97209 | ACAGCTGGAGTTGGT TGTACTGGCACT TCT GGTGTCGGTACA TTTGGTGTTGGTTGC TERM 1687 1391327 - 1391351 + g 73 -5.7 -4.57341 | TGGACGACCTTCTAC TGGTGTAATTG TTA CTAATACACCA TTTTTAACAGCAATT TERM 1688 1395261 - 1395285 + g 83 -7.2 -4.73617 | GTAGCTGCTTCTCCC CTACCAACAG AAATA CTATTGGTAG TTTCTTGTTTGTTTT SPD_1377 1395667 - 1397151 + | hypothetical protein TERM 1689 1397159 - 1397188 + T 75 -8.7 -3.40389 | opp_overlap 1397164, overlap 1397164 CTTTATAAGTTATCA AAAAAGTCAGCAT AATC GTGCTGACTTTTC TCTTATCTGATTTCT TERM 1690 1397164 - 1397183 + T 93 -8.6 -4.76963 | opp_overlap 1397164, overlap 1397159 TAAGTTATCAAAAAA GTCAGCAT AATC GTGCTGAC TTTTCTCTTATCTGA TERM 1691 1397183 - 1397164 - T 88 -7.9 -5.18357 | opp_overlap 1397164 1397159 TAAGTTATCAAAAAA GTCAGCA TAATCG TGCTGAC TTTTCTCTTATCTGA SPD_1378 1397930 - 1397202 - | hypothetical protein TERM 1692 1398008 - 1397974 - R 87 -13 -2.78354 | opp_overlap 1397975 1397977 1397983, overlap 1397983 CAACCAAGAAATTCA TTTGAAAAACCTCGGT TTG ACCGAGGTTTTTCTAT TTATTTGGGCCATCC TERM 1693 1397975 - 1398007 + r 100 -16.5 -4.42062 | opp_overlap 1397974 1397983, overlap 1397977 1397983 AACCAAGAAATTCAT TTGAAAAACCTCGGT TTG ACCGAGGTTTTTCTA TTTATTTGGGCCATC TERM 1694 1397977 - 1398005 + r 100 -19.1 -3.81557 | opp_overlap 1397974 1397983, overlap 1397975 1397983 CCAAGAAATTCATTT GAAAAACCTCGGT TTG ACCGAGGTTTTTC TATTTATTTGGGCCA TERM 1695 1397983 - 1397999 + r 100 -12.3 -5.30448 | opp_overlap 1397983 1397974, overlap 1397977 1397975 AATTCATTTGAAAAA CCTCGGT TTG ACCGAGG TTTTTCTATTTATTT TERM 1696 1397999 - 1397983 - R 100 -12.3 -4.63184 | opp_overlap 1397977 1397975 1397983, overlap 1397974 AATTCATTTGAAAAA CCTCGGT TTG ACCGAGG TTTTTCTATTTATTT SPD_1379 1398173 - 1398009 - | hypothetical protein TERM 1697 1398076 - 1398089 + g 82 -3.9 -5.37345 | opp_overlap 1398076 AAACTTGTTAAGATA GATAA GAAT TTATC TTTTTTCTCCTTGAA SPD_1380 1399935 - 1398340 - | hypothetical protein def-2 1400357 - 1399947 - | peptide deformylase TERM 1698 1400441 - 1400475 + r 81 -8.1 -4.19648 | gap 1, opp_overlap 1400450, overlap 1400450 CCTTTCCCTCAACTG TAGC-AAAAAGCCATC CGAA GATGACTTTTTTGCTA TTTAATTTCTGTATA TERM 1699 1400450 - 1400465 + r 74 -3.2 -5.32699 | opp_overlap 1400450, overlap 1400441 CAACTGTAGCAAAAA GCCATC CGAA GATGAC TTTTTTGCTATTTAA TERM 1700 1400465 - 1400450 - R 74 -5.4 -4.74801 | opp_overlap 1400450 1400441 CAACTGTAGCAAAAA GCCATC CGAA GATGAC TTTTTTGCTATTTAA SPD_1382 1401264 - 1400473 - | putative glutathione S-transferase YghU TERM 1701 1400817 - 1400807 - G 76 -6.8 -4.42386 | opp_overlap 1400807 CCCCCACCTAGAAAA GGTG CTG CACC TGCTTGCCAGAATAG SPD_1383 1403973 - 1401277 - | cation-transporting ATPase, E1-E2 family protein TERM 1702 1404069 - 1404044 - H 100 -11.3 -5.40464 | opp_overlap 1404043 1404042, overlap 1404008 1404003 CACGACAAACAAAAA GAGACCTGTTA ATCA TAACAAGTCTC GCTGTTTAAGATAGG SPD_1384 1404277 - 1405461 + | cation efflux family protein TERM 1703 1405455 - 1405496 + T 82 -8.9 -3.97947 | opp_overlap 1405456, overlap 1405456 TCAAGAAACCAAAAA AGAATAGAGAAATCCTTTC ATGA GACGGGATTTTTCTATTCG TTTATACTCAATAAA TERM 1704 1405495 - 1405456 - T 93 -8 -5.46129 | opp_overlap 1405455 1405456 CAAGAAACCAAAAAA GAATAGAGAAATCCTTTC ATGA GACGGGATTTTTCTATTC GTTTATACTCAATAA TERM 1705 1405456 - 1405495 + T 87 -12.4 -2.98447 | opp_overlap 1405456, overlap 1405455 CAAGAAACCAAAAAA GAATAGAGAAATCCTTTC ATGA GACGGGATTTTTCTATTC GTTTATACTCAATAA SPD_1385 1407475 - 1405604 - | ABC transporter, ATP-binding protein SPD_1386 1408656 - 1407472 - | tRNA CCA-pyrophosphorylase TERM 1706 1408633 - 1408655 + g 86 -10.6 -3.79787 | opp_overlap 1408634, overlap 1408634 TTCTAATACTGGTAA AGCCTTCTGA AAT TCAGAAGGCA TTTGCGTTAATCTCA TERM 1707 1408654 - 1408634 - G 100 -14.1 -3.6106 | opp_overlap 1408633 1408634 TCTAATACTGGTAAA GCCTTCTGA AAT TCAGAAGGC ATTTGCGTTAATCTC TERM 1708 1408634 - 1408654 + g 93 -14.1 -2.8739 | opp_overlap 1408634, overlap 1408633 TCTAATACTGGTAAA GCCTTCTGA AAT TCAGAAGGC ATTTGCGTTAATCTC dapB 1409435 - 1408668 - | dihydrodipicolinate reductase TERM 1709 1408965 - 1408986 + g 87 -6.5 -5.22006 | CTCAGCTGTTTTAAT GGCTGTTCC ACTC GGAGCATCC TTTTTCTTGTCATGA SPD_1388 1410560 - 1409712 - | DegV family protein SPD_1389 1410936 - 1410562 - | hypothetical protein SPD_1390 1412362 - 1411010 - | phosphoglucomutase/phosphomannomutase family protein SPD_1391 1413165 - 1412386 - | hypothetical protein SPD_1392 1413967 - 1413152 - | hypothetical protein TERM 1710 1413941 - 1413925 - G 79 -6.7 -4.58644 | AAGCAACAATCAAAA TATCAAT CAG ATTGATA GCTATCGTCCATGGA SPD_1393 1414145 - 1415113 + | pyridine nucleotide-disulphide oxidoreductase family protein TERM 1711 1415147 - 1415118 - T 80 -5 -5.26316 | opp_overlap 1415121, overlap 1415121 CCAGTTTATAAAAAA GAACCACGAGTC ACATAG GATTCGTGGTTT TATAATTCATCCGCT TERM 1712 1415121 - 1415144 + T 89 -8.9 -4.56607 | opp_overlap 1415118 1415121 GTTTATAAAAAAGAA CCACGAGTC ACATAG GATTCGTGG TTTTATAATTCATCC TERM 1713 1415144 - 1415121 - T 80 -6.7 -4.72201 | opp_overlap 1415121, overlap 1415118 GTTTATAAAAAAGAA CCACGAGTC ACATAG GATTCGTGG TTTTATAATTCATCC SPD_1394 1416058 - 1415147 - | hypothetical protein SPD_1395 1417032 - 1416055 - | hypothetical protein SPD_1396 1417919 - 1417029 - | hypothetical protein TERM 1714 1417963 - 1417941 - R 100 -11.4 -4.34402 | CTCCTTATATCAAAA GAAGTTTGGC AAC ACCAAACTTC AACTAGCTTATCCAA SPD_1397 1418351 - 1417971 - | endoribonuclease L-PSP SPD_1398 1418949 - 1418362 - | GTPase EngB clpX 1420190 - 1418958 - | ATP-dependent protease ATP-binding subunit SPD_1400 1420392 - 1420222 - | hypothetical protein folA 1420898 - 1420392 - | dihydrofolate reductase TERM 1715 1421005 - 1420984 - R 93 -8.1 -5.65678 | opp_overlap 1420984 ACAAAATAGAAAAAA TCTGTAAGA AATT TCCTACAGA TTTATCTATGTTTCC SPD_1402 1421546 - 1421028 - | non-heme iron-containing ferritin TERM 1716 1422027 - 1422004 - R 78 -2.4 -5.59962 | gap 1 TAAAACAAAGAAAAA GAGGG-TGCTA CTA TCACATCCCTC TTTCAAATCATCGCT lytC 1423514 - 1422042 - | 1,4-beta-N-acetylmuramidase, putative TERM 1717 1423562 - 1423536 - R 74 -3.1 -5.24129 | gap 1 CTCTCCTATAAAAAA TGTAACAGACAT CTGA ATG-CTGTTCCA CCTAGCTTTTGCTAC tpiA 1424343 - 1423585 - | triosephosphate isomerase TERM 1718 1423626 - 1423612 - G 70 -8.6 -3.33399 | GTCAAGCAAAGCCAA GAAGCT TTC AGCTTC AAGTGACGCACCACC TERM 1719 1423988 - 1423998 + g 79 -5.4 -4.9251 | overlap 1423988 GGAAGCATACCGTTC GCAA AGA TTGC TTTTGCTTTTTTGTT TERM 1720 1423988 - 1424004 + g 81 -3 -5.5353 | overlap 1423988 GGAAGCATACCGTTC GCAAAG ATTGC TTTTGC TTTTTTGTTGATATC SPD_1405 1425118 - 1424441 - | hypothetical protein metA 1426071 - 1425127 - | homoserine O-succinyltransferase TERM 1721 1425429 - 1425417 - G 70 -5.5 -4.45168 | opp_overlap 1425417 TGGCCAAAATAGAAA CCCCA ACC TGAGG TCCTTCTGATAAAAT TERM 1722 1426226 - 1426252 + r 70 -8 -3.22298 | opp_overlap 1426232, overlap 1426227 1426232 TATATCCTAGTGTAG AGAAAACAGCCC TAG GGACTGTTTTCA TTAATAATGCATAAG TERM 1723 1426227 - 1426251 + r 82 -11.5 -2.53164 | opp_overlap 1426232, overlap 1426226 1426232 ATATCCTAGTGTAGA GAAAACAGCCC TAG GGACTGTTTTC ATTAATAATGCATAA TERM 1724 1426246 - 1426232 - R 82 -7.8 -4.54047 | opp_overlap 1426227 1426226 1426232 CTAGTGTAGAGAAAA CAGCCC TAG GGACTG TTTTCATTAATAATG TERM 1725 1426232 - 1426246 + r 71 -5.6 -4.46615 | opp_overlap 1426232, overlap 1426227 1426226 CTAGTGTAGAGAAAA CAGCCC TAG GGACTG TTTTCATTAATAATG apt 1426783 - 1426253 - | adenine phosphoribosyltransferase TERM 1726 1426705 - 1426721 + g 73 -8.7 -3.76411 | opp_overlap 1426704 AAGGACTAATATCAC GGAAGGT AAT GCCTTCC TTTGGATAATTTTCA SPD_1408 1427611 - 1426853 - | hypothetical protein TERM 1727 1427904 - 1427892 - R 82 -7.7 -4.52857 | AGGTTGCAGATAAAA CTGAC GAA GTCAG TAATCATACGTACGG TERM 1728 1428035 - 1428011 - R 100 -11.5 -4.72272 | CTTCCCTAGCAAAAA GGAGAGAAGCA TTT TGTTTCTCTCC CTAGATCAACTGATA SPD_1409 1429242 - 1428112 - | sugar ABC transporter, ATP-binding protein TERM 1729 1429331 - 1429353 + r 80 -9.2 -3.56643 | opp_overlap 1429331 CAAAAAAATAAAAAA GTTCTGTGCA ACT TGCACAAAAC TTTAGAGAATATCGG TERM 1730 1429353 - 1429331 - R 100 -11.4 -6.12458 | opp_overlap 1429331 CAAAAAAATAAAAAA GTTCTGTGCA ACT TGCACAAAAC TTTAGAGAATATCGG TERM 1731 1429521 - 1429492 - R 77 -8.7 -3.61232 | opp_overlap 1429497, overlap 1429497 TTTTTTAGAGAAATA CAAAAGAGCTAGC TTTA GCTAACTCTTTTC CTATGCGGAGAGAGG TERM 1732 1429516 - 1429497 - R 95 -8.6 -4.87328 | opp_overlap 1429497, overlap 1429492 TAGAGAAATACAAAA GAGCTAGC TTTA GCTAACTC TTTTCCTATGCGGAG TERM 1733 1429497 - 1429516 + r 74 -6.4 -4.34402 | opp_overlap 1429497 1429492 TAGAGAAATACAAAA GAGCTAGC TTTA GCTAACTC TTTTCCTATGCGGAG SPD_1411 1430267 - 1429692 - | isochorismatase family protein codY 1431055 - 1430267 - | transcriptional repressor CodY TERM 1734 1431150 - 1431187 + r 79 -8.9 -3.82442 | opp_overlap 1431153, overlap 1431153 ACTTGCATTGACTTA CAATTTAATTAAAAA CCAGAATA TTTTTAATTAAATTG TTCCTTTTCTATTGA TERM 1735 1431312 - 1431294 - R 100 -9.6 -5.36441 | opp_overlap 1431294 TCCTTATATAAAAAA GCGATTCA TTT TGAACCGC TTTTTCTTATTTATC TERM 1736 1431294 - 1431312 + r 93 -7.4 -5.42164 | opp_overlap 1431294 TCCTTATATAAAAAA GCGATTCA TTT TGAACCGC TTTTTCTTATTTATC SPD_1413 1432893 - 1431319 - | ATP-dependent RNA helicase, putative TERM 1737 1432544 - 1432556 + g 77 -4.9 -4.89063 | ATATGGGCACCAGAT TTAAG AGC CTTAA TTTGTTTTTCAATGC SPD_1414 1434318 - 1433092 - | oxalate:formate antiporter SPD_1415 1434508 - 1435824 + | pyridine nucleotide-disulfide oxidoreductase TERM 1738 1435847 - 1435863 + F 100 -9.4 -4.93365 | opp_overlap 1435847 TCTCATCTTAACTGA CAGCCC TCTTT GGGCTG TTTTTACTTCTACGA TERM 1739 1435863 - 1435847 - f 72 -9.4 -2.53876 | opp_overlap 1435847 TCTCATCTTAACTGA CAGCCC TCTTT GGGCTG TTTTTACTTCTACGA SPD_1416 1435923 - 1437266 + | hypothetical protein SPD_1417 1437266 - 1438048 + | hypothetical protein TERM 1740 1438066 - 1438098 + F 100 -10.7 -4.16397 | opp_overlap 1438073, overlap 1438073 AAAGGAAAATGATAT CAAAGAACTCCGTTA TCT TGTCGGAGTTTTTTG TCTTTTCTTTTACCC TERM 1741 1438073 - 1438091 + F 86 -5.2 -5.65678 | opp_overlap 1438073, overlap 1438066 AATGATATCAAAGAA CTCCGTTA TCT TGTCGGAG TTTTTTGTCTTTTCT pepQ 1438174 - 1439256 + | proline dipeptidase PepQ TERM 1742 1439231 - 1439242 + F 70 -4.4 -4.78077 | TCTTTACAAGCACCA GCAA AGAT TTGC TTTATTTTGATTAAA SPD_1419 1439249 - 1439452 + | hypothetical protein TERM 1743 1439588 - 1439620 + T 100 -12.2 -4.69549 | opp_overlap 1439591 ATTAATTTATCCGAA GGATTTAGTTCTGT ACTGC ACAGGACTAAGTCC TTTTAGTTTTACCTT TERM 1744 1440888 - 1440848 - T 100 -11.4 -5.19328 | opp_overlap 1440846 1440845 ATTTCATAATAAAAA CACTCCAAAAGTTAGA TTTTTTCTG TCTAACTTTTGGGGTG CAGTTCATCATTTCA SPD_1422 1441532 - 1441071 - | hypothetical protein SPD_1423 1442283 - 1441510 - | phosphomethylpyrimidine kinase TERM 1745 1441807 - 1441817 + g 76 -6.8 -4.43213 | TAAATCATGCAATTT CTGC GCT GCAG TTTTCATGTCTTCCA truA 1443022 - 1442273 - | tRNA pseudouridine synthase A TERM 1746 1443339 - 1443321 - R 93 -7.5 -5.50723 | opp_overlap 1443321 1443320 GTATCAAAAGAAAAA CTTAGGA ATCAA TCCTAAG CTCTCTTCTGAAGTA SPD_1425 1444486 - 1443335 - | transporter, major facilitator family protein SPD_1426 1445355 - 1444726 - | hypothetical protein TERM 1747 1445151 - 1445164 + g 71 -6.7 -4.13767 | opp_overlap 1445150, overlap 1445140 TTAAGCGCAAGAGAC TTGGC CTTT GCCAA TTTTCACCTACACGG phnA 1445696 - 1445358 - | PhnA protein TERM 1748 1445815 - 1445798 - R 86 -5.6 -5.68039 | opp_overlap 1445797 1445798 AAATTTAGAAAAAAA CCGATA TCAATC TATCGG CTTTTCTACATTTAC cmk 1446498 - 1445827 - | cytidylate kinase TERM 1749 1446133 - 1446143 + g 70 -5.4 -4.44667 | opp_overlap 1446127, overlap 1446130 CATGACAATCCCGCC TTGC TGG GCAA TTTCTTGTTGGAGAG SPD_1429 1446983 - 1446507 - | hypothetical protein fer 1447035 - 1447241 + | ferredoxin SPD_1431 1448256 - 1447303 - | glycosyl transferase, group 2 family protein TERM 1750 1447636 - 1447621 - G 83 -3.3 -5.54894 | AATGGAGTAAAAAAA GAGTT GCCTAA AACTC CAACTGGTCTTGCCA TERM 1751 1448191 - 1448171 - G 77 -9.8 -3.53091 | ATTTCTGTTTCCAAA TCTGGAAG TAAAG CTTCCAGA GCCTGATAAAAAAGA TERM 1752 1448220 - 1448205 - G 90 -7.6 -5.252 | opp_overlap 1448205 1448201 GAGCCTGATAAAAAA GAGGAA GTAC TTCCTC TTCGTTTAAACAAGG galE-1 1449277 - 1448258 - | UDP-glucose 4-epimerase TERM 1753 1449485 - 1449467 - R 78 -10.4 -2.61383 | opp_overlap 1449466, overlap 1449466 1449476 AGTTCTATCCACAAC CTCAAAAC AGT GTTTTGAG CTGACTTCGTCAGTT TERM 1754 1449531 - 1449511 - R 72 -8.3 -3.35996 | overlap 1449512 CAGTTCTATCCACAA CCTCAAAGC AGT GCTTTGAGT AACCCGCGGCTAGTT TERM 1755 1449530 - 1449512 - R 84 -11.8 -2.61383 | overlap 1449511 AGTTCTATCCACAAC CTCAAAGC AGT GCTTTGAG TAACCCGCGGCTAGT SPD_1433 1450681 - 1449578 - | FAD dependent oxidoreductase TERM 1756 1450153 - 1450165 + g 76 -3.3 -5.27335 | opp_overlap 1450153 AGCCTGATGATAAGA GTGTC AGA GTCAC TTTTTCTTTGACCAG SPD_1434 1451495 - 1450698 - | hypothetical protein TERM 1757 1451488 - 1451514 + g 73 -9.4 -3.23183 | opp_overlap 1451495 TGGATCACTTCACTT GCTAACATGGAG CAC CTCCTTGATAGC TTGAATCTTATCTAC SPD_1435 1452159 - 1451482 - | hypothetical protein TERM 1758 1452134 - 1452108 - G 77 -8 -4.29738 | CCACATCTAGTAAAA TAGCCCCCTGTG ACA CAAAGGAAGCTA CCAATTCTAATCTCT TERM 1759 1452232 - 1452255 + r 90 -8.2 -4.91046 | opp_overlap 1452234, overlap 1452234 TCTTGTACCTAAAAA AACTGCAATC CACA GATTGCAGTC TTTCTTTATTTTCTA TERM 1760 1452234 - 1452253 + r 93 -10.8 -4.03308 | opp_overlap 1452234, overlap 1452232 TTGTACCTAAAAAAA CTGCAATC CACA GATTGCAG TCTTTCTTTATTTTC TERM 1761 1452253 - 1452234 - R 100 -10.8 -5.47218 | opp_overlap 1452232 1452234 TTGTACCTAAAAAAA CTGCAATC CACA GATTGCAG TCTTTCTTTATTTTC SPD_1436 1454597 - 1452261 - | cation-transporting ATPase, E1-E2 family protein TERM 1762 1454278 - 1454290 + g 77 -7.7 -4.28651 | overlap 1454272 AGAGCAACTTCCTGA CCATC ACG GATGG TTTTGACCTTTTCCT TERM 1763 1455359 - 1455345 - g 76 -2.1 -5.39755 | opp_overlap 1455351, overlap 1455350 1455351 CACAATGATAAAAAA CCAAA TCCAC TCTGG TGGTTTATCCGCATC SPD_1437 1454730 - 1455479 + | acyltransferase domain-containing protein TERM 1764 1455490 - 1455509 + T 74 -5.7 -4.66057 | opp_overlap 1455490 CATAGAAGAAATGAA CCTTGGC CAAACA GCTAAGG TTTTCATTTATATAT TERM 1765 1455677 - 1455657 - T 80 -6.9 -4.62054 | opp_overlap 1455657 1455661 CTAATCAAATCAAAA GCCACTCTA CAA TAGAGTAAC TTTAAGATTGTCCAT TERM 1766 1455710 - 1455730 + T 76 -9.7 -2.92613 | opp_overlap 1455710 1455722 1455727, overlap 1455722 ATACTCAATGAAAAA GCCCTCTGA AAA TCAGAGAGC TGATTTGAGCTCGGG TERM 1767 1455730 - 1455710 - T 100 -11.9 -4.89009 | opp_overlap 1455710 1455722, overlap 1455722 1455727 ATACTCAATGAAAAA GCCCTCTGA AAA TCAGAGAGC TGATTTGAGCTCGGG SPD_1438 1456386 - 1455772 - | cadmium resistance transporter, putative TERM 1768 1456328 - 1456314 - G 74 -4.4 -4.86731 | GCTGTGCAAATAAAA TAATTA AAA TAATTA AATAATCGATACTGG TERM 1769 1456557 - 1456582 + r 73 -7.8 -3.86897 | opp_overlap 1456562 1456577, overlap 1456557 AGTGACTACTTCCAT GTAAAGTATA ACATAC TATACTTTAC TTTGTAAAGAGTGGG TERM 1770 1456647 - 1456621 - R 100 -16 -2.87132 | opp_overlap 1456614 1456613 GGGGGCTTGCATACA GCTACTCGGCTT GAA AAGCCGAGTAAC TGCGCACCTTTATGG TERM 1771 1456753 - 1456734 - R 100 -10 -5.4756 | opp_overlap 1456734 1456745 AACCTCAATAAAAAA GCCCTCTG AAGT CAGAGAGC TGATTTGAGCCCGGG TERM 1772 1456958 - 1456943 - R 100 -9 -6.23545 | GTGAAACAAAAAAAA TCTCCC CGAA GGGAGA AAAGCTGGTTTATTT TERM 1773 1457066 - 1457047 - R 79 -5.7 -5.1925 | opp_overlap 1457047 TGACAACGCAAAAAA GCTACCC AATTTA GAGTAGC TTCATTATCAAGATA rpsO 1457389 - 1457120 - | 30S ribosomal protein S15 TERM 1774 1457201 - 1457211 + g 80 -2.4 -5.53991 | TGCAAGCAAGTTACG ACGG CGA CCGA TTTTTTTCATCAATC TERM 1775 1457226 - 1457243 + g 70 -5.5 -4.38219 | ATTTTTTTCATCAAT CCACGGT AAGT AGCGTGG TCTTTTTTGTGTTGT SPD_1440 1458159 - 1457530 - | hypothetical protein TERM 1776 1458174 - 1458200 + H 70 -8.2 -3.33315 | TTTTTTATACCTCTC TTGTTGTAATTA TTT TAGTTACAGCAA TTGTGACACTCTTAA SPD_1441 1458222 - 1458344 + | hypothetical protein TERM 1777 1458981 - 1459006 + G 100 -14.1 -5.80364 | AAGGTGGAACCACGT TGCGACGTCCT TTCG AGGATGTCGCA TTTTTTTATTAGGAT SPD_1442 1458963 - 1459169 + | hypothetical protein SPD_1443 1459176 - 1459352 + | hypothetical protein TERM 1778 1459699 - 1459711 + G 75 -7.7 -3.9712 | TGGGAGTTGGTCCAG CCATC GAA GATGG TTTCTACTACGATAC TERM 1779 1459779 - 1459761 - g 70 -9.6 -2.54276 | overlap 1459760 ATCTCTAACGAAGAC CTTCCTCG TAT CGAAGAAG AAATGCAAAAAATCG thrS 1459410 - 1461353 + | threonyl-tRNA synthetase TERM 1780 1461369 - 1461385 + T 100 -12.3 -4.97666 | opp_overlap 1461369 GAGTCTAGCATAAAA GCCTCCA ATC TGGAGGC TTTTTCTCATCTATT TERM 1781 1461385 - 1461369 - T 100 -12.3 -4.46926 | opp_overlap 1461369 GAGTCTAGCATAAAA GCCTCCA ATC TGGAGGC TTTTTCTCATCTATT SPD_1445 1462376 - 1461402 - | sensor histidine kinase SPD_1446 1463046 - 1462369 - | DNA-binding response regulator TERM 1782 1463144 - 1463114 - H 82 -9.9 -3.68265 | opp_overlap 1463116 1463141, overlap 1463141 AAACTGAATTTGAAA TAGCCTGTTTTTA GCCAG TACAAACAGGCTA TGCTACTAGCTAATT SPD_1447 1463202 - 1464275 + | hypothetical protein TERM 1783 1464349 - 1464304 - T 80 -7.1 -4.59081 | opp_overlap 1464309, overlap 1464309 TAAATGTATACAAAA CAAAAGACCTAGAATACATAC TTTC ATGTGCATTCTAAGTCTTTTT AAATAGAATCTAATA TERM 1784 1464344 - 1464309 - T 89 -7 -5.23292 | opp_overlap 1464309, overlap 1464304 GTATACAAAACAAAA GACCTAGAATACATAC TTTC ATGTGCATTCTAAGTC TTTTTAAATAGAATC TERM 1785 1464309 - 1464344 + T 70 -4.1 -4.66609 | opp_overlap 1464309 1464304 GTATACAAAACAAAA GACCTAGAATACATA CTTTCA TGTGCATTCTAAGTC TTTTTAAATAGAATC TERM 1786 1464736 - 1464720 - T 93 -5.1 -5.96894 | opp_overlap 1464720 ATCCAAAGAAAAAAA GAGGG CATTTAT CCCTC TTAATCCTTCATCTG SPD_1448 1465174 - 1464737 - | Rrf2 family protein SPD_1449 1466092 - 1465250 - | hypothetical protein TERM 1787 1466144 - 1466159 + H 93 -7.6 -5.59357 | opp_overlap 1466142 ACATAAAAAGTCACA GCTAGA GAAA TCTAGC TTTTTTTGATATACT SPD_1450 1466204 - 1466854 + | iron-dependent transcriptional regulator TERM 1788 1466875 - 1466897 + G 95 -11.4 -5.06016 | opp_overlap 1466875 CAAGTCCCCTACCAA CCCTGAAAGT TTT ATTTTCAGGG TTTTATTTCTATCAT TERM 1789 1466897 - 1466875 - g 70 -9.2 -3.14881 | opp_overlap 1466875 CAAGTCCCCTACCAA CCCTGAAAGT TTT ATTTTCAGGG TTTTATTTCTATCAT SPD_1451 1466835 - 1467005 + | hypothetical protein TERM 1790 1467206 - 1467222 + G 80 -8.1 -4.40804 | ATGGGGAAATTACTT TGGTATT GTT AATACCA TTTTGTCCGGTGCTA TERM 1791 1467480 - 1467538 + G 100 -23.4 -4.5287 | overlap 1467481 1467482 GTAACAACTATTGCC TTTGCACTGTCCCTCATTGCCAATGCTT TGA ATGCATTGGCAATGAGGGACAGTGGGGC TTTTGGTTGATTTAC TERM 1792 1467481 - 1467537 + G 100 -26.9 -3.30638 | overlap 1467480 1467482 TAACAACTATTGCCT TTGCACTGTCCCTCATTGCCAATGCTT TGA ATGCATTGGCAATGAGGGACAGTGGGG CTTTTGGTTGATTTA TERM 1793 1467482 - 1467536 + G 100 -28.2 -2.57298 | overlap 1467481 1467480 AACAACTATTGCCTT TGCACTGTCCCTCATTGCCAATGCTT TGA ATGCATTGGCAATGAGGGACAGTGGG GCTTTTGGTTGATTT SPD_1452 1467156 - 1467548 + | hypothetical protein SPD_1454 1467807 - 1468244 + | hypothetical protein TERM 1794 1468316 - 1468333 + F 73 -8.4 -3.66784 | opp_overlap 1468315 1468312 1468316 ATTTTCAAAAACAAG GGGAGG GATTAA CCTCCC TTATATTAGACATAA TERM 1795 1468333 - 1468316 - f 70 -8.4 -3.24256 | opp_overlap 1468316, overlap 1468315 1468312 ATTTTCAAAAACAAG GGGAGG GATTAA CCTCCC TTATATTAGACATAA TERM 1796 1469046 - 1469067 + F 72 -8.1 -3.494 | opp_overlap 1469046 ATTTTATCCAATCTA TACGTTCTT TTTT AGGAACGTA TTCTCTAACAGCTTG TERM 1797 1469209 - 1469225 + F 86 -5.1 -5.626 | opp_overlap 1469212, overlap 1469210 TTTTTGCACATTATC ACACCTT TCT AAGGTGG TTTTTTTATCCCGTA TERM 1798 1469210 - 1469224 + F 82 -8.6 -3.96475 | opp_overlap 1469212, overlap 1469209 TTTTGCACATTATCA CACCTT TCT AAGGTG GTTTTTTTATCCCGT TERM 1799 1469327 - 1469309 - f 74 -5.4 -4.78149 | TCCACAATCTAAAAA TTTATCAT TTT ATGACAAA CATACTATCGTTAAA TERM 1800 1469395 - 1469360 - f 73 -7.8 -3.76952 | opp_overlap 1469360 CTGATTTAATCGAAA TTTTGAGTTATAAACT CCTC AGTTTCGAACTCAAAA TTAGTCGTGCAGGAT SPD_1455 1469540 - 1469653 + | hypothetical protein SPD_1456 1469793 - 1469954 + | hypothetical protein TERM 1801 1469955 - 1469999 + T 100 -15.2 -4.84527 | opp_overlap 1469966, overlap 1469957 TGGAGTATTTTATGA TCGATGAGAAAGACCAAGCC GACTG GGCTTGGTCTTTCTTATCTC TTTTTAGTATCTAGG TERM 1802 1469957 - 1469997 + T 100 -22.2 -4.03909 | opp_overlap 1469966, overlap 1469955 GAGTATTTTATGATC GATGAGAAAGACCAAGCC GACTG GGCTTGGTCTTTCTTATC TCTTTTTAGTATCTA TERM 1803 1469988 - 1469966 - T 100 -13.5 -3.98214 | opp_overlap 1469957 1469955 ATGATCGATGAGAAA GACCAAGCC GACTG GGCTTGGTC TTTCTTATCTCTTTT dtd 1470436 - 1469993 - | D-tyrosyl-tRNA deacylase relA 1472688 - 1470466 - | GTP pyrophosphokinase TERM 1804 1472799 - 1472769 - H 93 -5 -5.97979 | AGAATAAGAAAAAAA TAATTCAAAATT GCTTGAT AATTCTGAATTA TTGGCCCGTAATATA TERM 1805 1473029 - 1473049 + H 72 -8.3 -3.35996 | opp_overlap 1473039, overlap 1473030 AACTAGCCGCAGGTT ACTCAAAGC ACC GCTTTGAGG TTGTAGATAAGACTG TERM 1806 1473030 - 1473048 + H 84 -11.8 -2.61383 | opp_overlap 1473039, overlap 1473029 ACTAGCCGCAGGTTA CTCAAAGC ACC GCTTTGAG GTTGTAGATAAGACT TERM 1807 1473076 - 1473060 - H 87 -10.9 -3.48924 | opp_overlap 1473057 TGAGGTTGTAGATAA GACTGAC AAA GTCAGTC ACATATATACGGCAA TERM 1808 1473213 - 1473228 + H 73 -7.6 -3.79882 | ATTTCTATCTTTGCT CTCCTA ACGT TAGGAG TTTGCTGCCTGTTCT TERM 1809 1473457 - 1473484 + H 74 -5.5 -4.788 | opp_overlap 1473450 1473457 TTGATAAATTGATAA CCAGCCTGTCT TCATCT AGTCATGCTGG TTTTTAAGTTCATTT SPD_1459 1473683 - 1474312 + | metallo-beta-lactamase superfamily protein TERM 1810 1474407 - 1474371 - T 89 -8.8 -4.46212 | gap 1, opp_overlap 1474371 CTTTCTATTATAAAA GGCATCCTATCAAG-GT TTTC ACACGTGATTGGATGCC TTTTTTCTGATGACT TERM 1811 1474371 - 1474407 + T 95 -8.8 -5.31877 | gap 1, opp_overlap 1474371 CTTTCTATTATAAAA GGCATCCTATCAAG-GT TTTC ACACGTGATTGGATGCC TTTTTTCTGATGACT pepO 1476327 - 1474435 - | endopeptidase O TERM 1812 1476037 - 1476051 + g 71 -7.2 -3.91716 | opp_overlap 1476036 1476026 AAAATCCGCAAAAGT TTCCAA TTC TTGGAA TTCTTTAAGGAGTGG TERM 1813 1476482 - 1476446 - H 84 -8.1 -4.46212 | opp_overlap 1476441 1476438 1476446 CTTTCCATGATAAAA CGCATAATTCCAAGTTT TTT ACACTTGATACTATGCG TTTTATAATTTAGAA psaB 1476618 - 1477340 + | manganese ABC transporter, ATP-binding protein psaC 1477337 - 1478185 + | manganese ABC transporter, permease protein, putative TERM 1814 1478570 - 1478556 - g 80 -6.4 -4.75954 | opp_overlap 1478564 1478569, overlap 1478552 1478561 AAAACTGAAAACAAA GACTAC TTC GCAGTC AGCGACGGCGTTGAT SPD_1463 1478217 - 1479146 + | ABC transporter, substrate binding lipoprotein tpx 1479269 - 1479760 + | thiol peroxidase TERM 1815 1479807 - 1479767 - T 100 -9.1 -5.36441 | opp_overlap 1479767 GCCCTATAGAAAAAA TCCTCTGTCACAAAGAG TTCCCTG CTCTTTGAAACGGAGGA TTTTTGAATATTAGT TERM 1816 1479767 - 1479807 + T 100 -9.8 -4.75308 | opp_overlap 1479767 GCCCTATAGAAAAAA TCCTCTGTCACAAAGAGT TCCCT GCTCTTTGAAACGGAGGA TTTTTGAATATTAGT SPD_1465 1482564 - 1479856 - | hypothetical protein TERM 1817 1480145 - 1480133 - G 80 -7.7 -4.32034 | TCATTATTATGAAAA CCAAG AAC CTTGG TAGTGGAGAGTTCAC TERM 1818 1481763 - 1481802 + g 73 -5.6 -4.61482 | overlap 1481760 1481757 1481764 1481766 1481769 AATTAGTCTGAGCCT TGTCAAGGGTCTCTTGCC CCTT GTCTAGAGACTCTTGTCC TTCTTTTTTCAAAAG TERM 1819 1481764 - 1481801 + g 72 -9.1 -3.36166 | overlap 1481760 1481757 1481763 1481766 1481769 ATTAGTCTGAGCCTT GTCAAGGGTCTCTTGCC CCTT GTCTAGAGACTCTTGTC CTTCTTTTTTCAAAA TERM 1820 1481766 - 1481799 + g 75 -10.3 -3.23795 | overlap 1481760 1481757 1481764 1481763 1481769 TAGTCTGAGCCTTGT CAAGGGTCTCTTGCC CCTT GTCTAGAGACTCTTG TCCTTCTTTTTTCAA TERM 1821 1482095 - 1482114 + g 73 -2.1 -5.27938 | opp_overlap 1482098, overlap 1482098 TAAGTATGGTCTTTT AAAGAGG AATGAC CCTCTTC TTTTTCTTTAAAACT SPD_1466 1483267 - 1482566 - | ABC transporter, ATP-binding protein SPD_1467 1485928 - 1483517 - | hypothetical protein TERM 1822 1485022 - 1485032 + g 74 -4.6 -4.92385 | GCCTTGATTTCAATT GGGT ATA GCCC TTTTCTTTAGCTGTG TERM 1823 1485970 - 1485950 - R 88 -7.6 -5.13344 | ATACTAACATAAAAA GCCTAGAA ATCAA TCCTAGGC TTACAATTTTTTATT SPD_1468 1486673 - 1485981 - | phosphoglyceromutase TERM 1824 1486699 - 1486713 + r 75 -7.1 -4.27297 | CTCCTTTAAATTTTC CGAGG TTTCC CCTCG TTTATCTATTCTATT SPD_1469 1486912 - 1486724 - | hypothetical protein TERM 1825 1486795 - 1486805 + g 74 -4 -5.05712 | overlap 1486778 TTTGACAATGTTTGG CAAT CAC ATTG TTTTTGGTTGTTTCT SPD_1470 1487428 - 1487288 - | hypothetical protein SPD_1471 1487548 - 1487432 - | hypothetical protein TERM 1826 1487930 - 1487893 - R 100 -7.1 -5.88476 | opp_overlap 1487893 AAAATAAATAAAAAA CGCATCATATCAGGTAT TCAA AAACGTGATACAATGCG TTTAATAGACTATAA ileS 1490788 - 1487996 - | isoleucyl-tRNA synthetase TERM 1827 1490853 - 1490823 - R 83 -6.2 -5.10877 | ATAACAAATTAAAAA CCACGACTTCCA AAAAGGA CGAAAATCGTGG TACCACCTTTATTCG SPD_1473 1491157 - 1491041 - | hypothetical protein divIVA 1491924 - 1491136 - | cell division protein DivIVA TERM 1828 1491207 - 1491231 + g 79 -9.3 -3.84712 | opp_overlap 1491209 CTTGAGGACTCACTA CAGGAGTTGGA GTT TCCACTTCCTG TTTAATCTGAGCTTC ylmH 1492718 - 1491933 - | YlmH protein ylmG 1492978 - 1492715 - | YlmG protein ylmF 1493517 - 1492978 - | YlmF protein TERM 1829 1493092 - 1493104 + g 84 -7.7 -4.70879 | opp_overlap 1493091 1493092 TGTCAACAAATACAT GGTAG AAG CTACC TTTTTCAAATTTCCA ylmE 1494198 - 1493527 - | YlmE protein TERM 1830 1494080 - 1494051 - G 70 -9.3 -3.25223 | gap 1, opp_overlap 1494042, overlap 1494054 CACCGATATGATGAA CACCTAGCGGAAGC AAG GCTTCCGCT-GTCG GTACATCTACATACT TERM 1831 1494077 - 1494054 - G 81 -11.8 -2.50988 | gap 1, opp_overlap 1494042, overlap 1494051 CGATATGATGAACAC CTAGCGGAAGC AAG GCTTCCGCT-G TCGGTACATCTACAT ftsZ 1495462 - 1494203 - | cell division protein FtsZ TERM 1832 1494940 - 1494962 + g 70 -7.9 -3.62275 | opp_overlap 1494943, overlap 1494943 GCGGTGTTTTCTTAT CAACAATTT CAAGC AAATTGTTG TTTGAGATAATCAAT ftsA 1496852 - 1495479 - | cell division protein FtsA TERM 1833 1497051 - 1497041 - R 71 -5.4 -4.56775 | AGCTGCTTGTAAAAA CTCT CTA AGAG CAAAAAAGAAAGCTC TERM 1834 1497080 - 1497059 - R 74 -3 -5.27779 | TCTAAGAGCAAAAAA GAAAGCTC TGTGTT AAGCTTCC TTTGCAATCATTTTT SPD_1481 1497775 - 1497071 - | hypothetical protein SPD_1482 1498477 - 1497866 - | MutT/nudix family protein murF 1499837 - 1498464 - | UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase TERM 1835 1499220 - 1499230 + g 79 -5.4 -4.98531 | TGAAGCCATTCCGTC TGCA ATT TGCA TTTTTCCTTTAGCAA TERM 1836 1499932 - 1499942 + r 70 -8.2 -3.32294 | opp_overlap 1499931 1499932, overlap 1499931 CATTTTATATCAAAT GCGC TTC GCGC TTGTCAAAACTTTCC ddl 1500964 - 1499921 - | D-alanyl-alanine synthetase A TERM 1837 1500879 - 1500864 - G 79 -10.4 -3.57144 | GTCTTGACTGTGAAA CGGTCG TAAT CGACCG CACGCATGACACTCT TERM 1838 1501095 - 1501068 - R 71 -3.4 -5.02502 | CACACTATACAAAAA GAGGCCGATA GGAACGAT TTTCAGCCTC TTTGATTTTTTATAA recR 1501736 - 1501140 - | recombination protein RecR penA 1503804 - 1501747 - | penicillin-binding protein 2B TERM 1839 1502042 - 1502030 - G 71 -4.1 -4.87786 | overlap 1502031 GCAACCTGATAAAAA CCTTG GTG CAAGA TGCTCATATCGGAGT TERM 1840 1503053 - 1503066 + g 84 -8.1 -4.67353 | GCTTCTGCTTCTTCC GCTGG GAGA CCAGC TTTTTCACTGGATAC TERM 1841 1503640 - 1503655 + g 79 -3.2 -5.52384 | overlap 1503641 TGTAATCTTGGTCTG ACTAGC TGAG GCTAGC TTTTTTTCGTAAAAA TERM 1842 1503716 - 1503701 - G 70 -5.4 -4.42974 | overlap 1503702 TGCATATACAACAAA CGACCA ATAA TGGTCA TAAAGAGTAAAATGA SPD_1487 1504004 - 1504855 + | phosphosugar-binding transcriptional regulator, putative TERM 1843 1504847 - 1504879 + T 100 -16.5 -4.67608 | opp_overlap 1504850, overlap 1504850 CAAAAACGTGTAAGA AAATCCTAGTTTGGC TGA GCCAAACTAGGATTG TTTTGTCTTAAAATG TERM 1844 1504850 - 1504876 + T 100 -18.2 -4.44211 | opp_overlap 1504850, overlap 1504847 AAACGTGTAAGAAAA TCCTAGTTTGGC TGA GCCAAACTAGGA TTGTTTTGTCTTAAA TERM 1845 1504876 - 1504850 - T 100 -18.2 -4.6635 | opp_overlap 1504850 1504847 AAACGTGTAAGAAAA TCCTAGTTTGGC TGA GCCAAACTAGGA TTGTTTTGTCTTAAA SPD_1488 1505755 - 1504871 - | ROK family protein SPD_1489 1506504 - 1505773 - | N-acetylneuraminate lyase, putative TERM 1846 1506716 - 1506729 + r 85 -6.7 -5.39681 | CTATTATTTTTATTT TCTGC TAAA GCAGA TTTTTCTTTACTTCT SPD_1490 1507337 - 1506873 - | hypothetical protein SPD_1491 1507968 - 1507624 - | hypothetical protein SPD_1492 1508517 - 1508065 - | hypothetical protein SPD_1493 1509629 - 1508790 - | sugar ABC transporter, permease protein SPD_1494 1510532 - 1509645 - | sugar ABC transporter, permease protein SPD_1495 1512091 - 1510763 - | sugar ABC transporter, sugar-binding protein TERM 1847 1510803 - 1510831 + g 72 -4.5 -4.73388 | overlap 1510804 GTTTCGTTTGCTTTT TCAGTGAAGGCTT TCA AAGCATCCGCTGG TTTTTCGTCACCATT SPD_1496 1513733 - 1512216 - | PTS system, IIBC components nanE-1 1514450 - 1513752 - | N-acetylmannosamine-6-phosphate 2-epimerase TERM 1848 1514600 - 1514569 - R 79 -8.8 -3.77219 | overlap 1514571 ACTAGCCAAGTCAAA CAGCTCCTCTAAAA GTAC TTTCAGAGGAGCAA GTCGACCTATAATAG TERM 1849 1514598 - 1514571 - R 95 -13.6 -3.46783 | overlap 1514569 TAGCCAAGTCAAACA GCTCCTCTAAAA GTAC TTTCAGAGGAGC AAGTCGACCTATAAT SPD_1498 1515733 - 1514630 - | putative oxidoreductase TERM 1850 1515636 - 1515665 + g 76 -2.1 -5.50499 | opp_overlap 1515641 1515643, overlap 1515639 TCTGCATTATCTGGA TCATAGAGAAGAG TAAT CTCTGCTCCATCA TTTTTTTGCATGTAG nanB 1517838 - 1515745 - | sialidase B precursor TERM 1851 1517358 - 1517372 + g 83 -7.2 -4.79451 | opp_overlap 1517358 CTTCTATTCCATTAA CATACA TTG TGTATG TTTTATCTTTAGAAT TERM 1852 1517815 - 1517837 + g 95 -4.3 -5.73672 | AGAAATTCCTAGTTT TGAATAAAG ACCTC TTTTATTCA TTTTTTTCCTTCTTT SPD_1500 1518689 - 1517856 - | ABC transporter, permease protein SPD_1501 1519573 - 1518689 - | ABC transporter, permease protein TERM 1853 1519666 - 1519684 + r 71 -3.2 -5.05301 | opp_overlap 1519670 TCTACTGAACAGCCT CAAATAAA TCG TTTAATTG TTTTTCTGCTTCTTT SPD_1502 1520989 - 1519652 - | ABC transporter, substrate-binding protein SPD_1503 1521460 - 1521008 - | hypothetical protein TERM 1854 1522408 - 1522433 + r 80 -10.5 -3.06384 | opp_overlap 1522408, overlap 1522405 1522410 ATGTCATCAAAAAAA GATAGCAGGCT TGAA AACCTGCTATC TCCTTCTATTTTTAC TERM 1855 1522433 - 1522408 - R 100 -12.7 -5.52986 | opp_overlap 1522408 1522405 1522410 ATGTCATCAAAAAAA GATAGCAGGCT TGAA AACCTGCTATC TCCTTCTATTTTTAC nanA 1525468 - 1522475 - | sialidase A precursor SPD_1505 1526052 - 1525825 - | hypothetical protein TERM 1856 1526163 - 1526151 - R 71 -6.3 -4.24623 | opp_overlap 1526129 1526151 1526150 1526159, overlap 1526129 1526157 TTAAATATACATAAA GATAG ATT CTATC ACTTTTTATAAGTGT TERM 1857 1526332 - 1526319 - R 70 -2.4 -5.35224 | opp_overlap 1526319, overlap 1526314 TCCATAAAAAGAAAA CAGA AACTCA TCTG TTTTTATACTCAATG TERM 1858 1526386 - 1526404 + r 78 -10.4 -2.61383 | overlap 1526385 GCTAGCCGCATGATG CTCAAAAC ACT GTTTTGAG GTTGTAGATAAGACT TERM 1859 1526431 - 1526449 + r 78 -10.4 -2.61383 | opp_overlap 1526416 1526430, overlap 1526430 GACTGACAAAGTCAG CTCAAAAC ACT GTTTTGAG GTTGTGGATAGAACT TERM 1860 1526476 - 1526494 + r 78 -10.4 -2.61383 | opp_overlap 1526475, overlap 1526453 1526475 AACTGACGAAGTCAG CTCAAAAC ACT GTTTTGAG GTTGTGGATAGAACT TERM 1861 1526544 - 1526516 - R 73 -8.9 -3.24425 | overlap 1526508 1526528 GATAGAACTGACGAA GTCAGCTCAAAAC ACC GTTTTGAGGTGGC AGATAGAACTGACGA TERM 1862 1526565 - 1526553 - R 71 -7.7 -3.58905 | AGGTGGCAGATAGAA CTGAC GAA GTCAG TAACATATATACGGC TERM 1863 1526906 - 1526867 - R 89 -8.8 -4.4648 | opp_overlap 1526865 1526867 ATTTCTATGATAAAA CGCATAGTATCAAG TTTTCTTAATCC CCTGATACTATGCG TGTTTGTAATTTTTA SPD_1506 1527927 - 1526947 - | acetyl xylan esterase, putative TERM 1864 1527622 - 1527603 - G 79 -8.6 -3.9693 | overlap 1527614 CATCCATGGAAACAA CACCGTAA CCAG CTACGGTG AAGCCCAGCATGTCG TERM 1865 1527905 - 1527919 + g 80 -6.4 -4.7373 | TAGGTCTTAATTTCT TCTAGC AAA GCTGGA TTTTTCATAGCATGC TERM 1866 1528083 - 1528071 - R 79 -5.5 -5.04601 | opp_overlap 1528064 1528069 1528071, overlap 1528064 TTTAGAAACGAAAAA GAGCA TTT CGCTC TCTCTTCTGTTTATA TERM 1867 1528251 - 1528216 - R 72 -4.8 -4.81851 | opp_overlap 1528216 AGCCAAACCTAAAAA CTAGCTTAAGTTTTCC TTAG AGAAAGCTTAATCCAG ATGTTCTTTCTTTTC recG 1530258 - 1528243 - | ATP-dependent DNA helicase RecG alr 1531380 - 1530277 - | alanine racemase acpS 1531732 - 1531370 - | 4'-phosphopantetheinyl transferase TERM 1868 1531765 - 1531744 - R 100 -10.9 -4.26076 | opp_overlap 1531743 1531741 TCATTCTCATCAAAA GGAGTTGAG ATTC CCCAACTCC ATCCTTTTCACTTAT SPD_1510 1532808 - 1531777 - | phospho-2-dehydro-3-deoxyheptonate aldolase SPD_1511 1533841 - 1532810 - | phospho-2-dehydro-3-deoxyheptonate aldolase TERM 1869 1533903 - 1533865 - R 81 -8.3 -4.13995 | opp_overlap 1533875 TCCTTATAAAGCAAA CGGATACCCAGTAAAAA TTTAC TTTTCACAAGATATCCG CCTCTAAACTATCTC secA 1536435 - 1533922 - | preprotein translocase subunit SecA TERM 1870 1535946 - 1535958 + g 70 -7.7 -3.73072 | CATAGGCTTCTTTTT TCTCC ATT GGAGA TTTGGTAGCCAAGTT TERM 1871 1536562 - 1536539 - R 90 -8.2 -5.0925 | opp_overlap 1536537 1536533 1536541 TTTGAAAAGGAAAAA GAGGTTAGTT TCCA AGCTAACCTC TCTGACTTTTATGAT SPD_1514 1537531 - 1536881 - | ABC transporter, ATP-binding protein SPD_1515 1538110 - 1537535 - | hypothetical protein SPD_1516 1538960 - 1538169 - | hypothetical protein TERM 1872 1538936 - 1538909 - G 89 -12.2 -3.71205 | overlap 1538905 1538926 GAAAAAGCAAAGTAA GCAAGACATAAA CAAA TTTATGCCTTGC AAAAGTTAAGAGAGG SPD_1517 1539374 - 1538982 - | hypothetical protein TERM 1873 1539645 - 1539673 + H 70 -8.4 -3.18155 | ATAATAATACCACCT TTTTCTACGTTT TTTAT AAATGTAGAAAA TATTCACATTTTTCT SPD_1518 1539701 - 1540552 + | transcriptional activator, Rgg/GadR/MutR family protein TERM 1874 1540769 - 1540727 - T 86 -5.8 -5.54338 | opp_overlap 1540727 TAATCAAAATAAAAA TGACTGTATCTATAGCTC CATAAAC AAATCATAGATACAGTCA TTTTTTAGTTCCTAC TERM 1875 1540727 - 1540769 + T 74 -3 -5.30155 | gap 1, opp_overlap 1540727 TAATCAAAATAAAAA TGACTGTATCTATAGCT CCATAAACAA ATC-ATAGATACAGTCA TTTTTTAGTTCCTAC TERM 1876 1541677 - 1541658 - T 86 -5 -5.59357 | opp_overlap 1541658 ATTATATCAAAAAAA TCCGGAAC TGTC ATTCCAGA TTCTACTTTTTTATT engA 1542998 - 1541688 - | GTP-binding protein EngA SPD_1520 1543725 - 1543012 - | nitroreductase family protein dnaI 1544618 - 1543722 - | primosomal protein DnaI TERM 1877 1544018 - 1544034 + g 71 -5.1 -4.62783 | opp_overlap 1544017 CCAAGGTCTTAACAT TGCCATC ACT GATAGCA TTTTTGACATCAATG TERM 1878 1544273 - 1544260 - G 73 -2.4 -5.18561 | overlap 1544252 TAAACATCTAAAAAA CTGA CATTTT TCAG GCTAGATGGAAAATT SPD_1522 1545788 - 1544619 - | hypothetical protein TERM 1879 1545027 - 1545037 + g 81 -6.8 -4.69549 | opp_overlap 1545027 GATTTCTGCCAAGAA CTGC AGG GCAG TTTTACTTTTGGCTT TERM 1880 1545723 - 1545680 - G 85 -8.8 -4.40003 | gap 1 TCGTATAAAGATAAA GGCTCAGTGCCTCCTGACCGA TAA TCGGG-AGGTAGCACTGTACC AGAGATGAGGTATCT SPD_1523 1546262 - 1545789 - | transcriptional regulator NrdR SPD_1524 1546402 - 1546767 + | transcriptional regulator, GntR family protein SPD_1525 1546772 - 1547467 + | ABC transporter, ATP-binding protein SPD_1526 1547484 - 1548251 + | hypothetical protein TERM 1881 1548403 - 1548349 - T 100 -29.8 -3.04501 | overlap 1548353 ATCAAGTGTTGAATA TGAACTGCCCCCCAAAAGTTAGAC AGAAAAA ATCTAACTTTTGGGGGGCAGTTCA AAAAATCCTTGATAT TERM 1882 1548399 - 1548353 - T 100 -24.8 -3.36452 | overlap 1548349 AGTGTTGAATATGAA CTGCCCCCCAAAAGTTAGAC AGAAAAA ATCTAACTTTTGGGGGGCAG TTCAAAAAATCCTTG TERM 1883 1548658 - 1548643 - T 76 -6.8 -4.59773 | opp_overlap 1548643 1548647 TTTCACCTTTAAAAA CCTCGC TTTC GCAAGG CTCTTCTATTTATAA SPD_1527 1549863 - 1548664 - | hypothetical protein TERM 1884 1549358 - 1549369 + g 81 -3 -5.54338 | overlap 1549365 GCACCTGCTGCAATT GTTT GAAT AAAC TTTTTATTTTCCTTG SPD_1528 1550753 - 1549860 - | ABC transporter, ATP-binding protein TERM 1885 1550960 - 1550948 - H 82 -7.7 -4.52857 | AGGTTGCAGATAAAA CTGAC GAA GTCAG CTCAAAACACTGTTT TERM 1886 1550961 - 1550979 + H 78 -10.4 -2.61383 | opp_overlap 1550960, overlap 1550960 AACTGACGAAGTCAG CTCAAAAC ACT GTTTTGAG GTTGTGGATAGAACT TERM 1887 1552301 - 1552319 + G 79 -8.8 -4.03234 | CATTCCAGGGGCCTT GACCTCGG TGG CTGGGGTC TTTATCTACGGGCAC TERM 1888 1552373 - 1552383 + G 71 -6.8 -4.05861 | TATCGGCATCGTGAT TGGC TGT GCCA TTATCTTTTATCTAG SPD_1530 1552062 - 1552679 + | hypothetical protein TERM 1889 1552691 - 1552712 + T 80 -7.3 -4.58395 | opp_overlap 1552691 TTGACACGTAAAAAA TCCGTTTGG TTTC CCAAGTGGA TTTTTAAAGCGTAGA TERM 1890 1552853 - 1552828 - T 73 -6.9 -4.03234 | opp_overlap 1552830 1552844, overlap 1552830 CCGCCGTGATAGAAA CACCTGAAATC TAAT GGTTTCAGGTA TTCGGAAACTTTGAG TERM 1891 1552830 - 1552851 + T 74 -9.5 -3.03635 | opp_overlap 1552830 1552828, overlap 1552844 GCCGTGATAGAAACA CCTGAAATC TAAT GGTTTCAGG TATTCGGAAACTTTG TERM 1892 1552862 - 1552883 + T 70 -7.3 -3.71645 | opp_overlap 1552862 TCAGGTATTCGGAAA CTTTGAGAC ACTA GGCTCAAAG TTTAGGTATGGAATT TERM 1893 1552960 - 1552997 + T 100 -16.5 -4.66535 | opp_overlap 1552963 1552968, overlap 1552961 1552968 AAATATTGTTTTCAA CCACAAAATCCGTTTGG TTTC CCAAGCGGATTTTGTGC TTTATTTTGAAACTT TERM 1894 1552961 - 1552996 + T 100 -20 -3.38836 | opp_overlap 1552963 1552968, overlap 1552960 1552968 AATATTGTTTTCAAC CACAAAATCCGTTTGG TTTC CCAAGCGGATTTTGTG CTTTATTTTGAAACT TERM 1895 1552994 - 1552963 - T 95 -14.6 -2.71144 | opp_overlap 1552961 1552960 1552968, overlap 1552968 TATTGTTTTCAACCA CAAAATCCGTTTGG TTTC CCAAGCGGATTTTG TGCTTTATTTTGAAA TERM 1896 1552989 - 1552968 - T 89 -8.7 -4.5442 | opp_overlap 1552961 1552960 1552968, overlap 1552963 TTTTCAACCACAAAA TCCGTTTGG TTTC CCAAGCGGA TTTTGTGCTTTATTT TERM 1897 1552968 - 1552989 + T 100 -10.9 -4.68612 | opp_overlap 1552968 1552963, overlap 1552961 1552960 TTTTCAACCACAAAA TCCGTTTGG TTTC CCAAGCGGA TTTTGTGCTTTATTT scrK 1553886 - 1552999 - | fructokinase TERM 1898 1554018 - 1553984 - R 83 -11 -3.10012 | opp_overlap 1553990, overlap 1553990 AATCTTACTATCTAA TAAAAACGAACAAACA TGT CATTTGTTCGTTTTCA CATTAGAGAGGATTG TERM 1899 1553990 - 1554012 + r 71 -6.4 -4.19238 | opp_overlap 1553984 1553990 ACTATCTAATAAAAA CGAACAAA CATGTCA TTTGTTCG TTTTCACATTAGAGA TERM 1900 1554012 - 1553990 - R 88 -7.8 -5.11063 | opp_overlap 1553990, overlap 1553984 ACTATCTAATAAAAA CGAACAAACA TGT CATTTGTTCG TTTTCACATTAGAGA SPD_1532 1555918 - 1554035 - | PTS system IIABC components TERM 1901 1554490 - 1554514 + g 72 -3.6 -5.06414 | gap 1, opp_overlap 1554495 CAAGTGTTTCATTTT GAAG-AGCTGC TGGC GCAACTTCTTC TTTTTCTTCAGCCAC SPD_1533 1556242 - 1556045 - | hypothetical protein scrB 1556295 - 1557749 + | sucrose-6-phosphate hydrolase TERM 1902 1558405 - 1558391 - g 73 -7.2 -3.98952 | GAAAAGAAATGGAAA TCAAGA ATA TCTTGA CCCGGGAAAAACCAG scrR 1557730 - 1558695 + | sucrose operon repressor TERM 1903 1558699 - 1558734 + T 75 -9.9 -2.54586 | opp_overlap 1558702 1558707, overlap 1558707 AAAAGTATTTAAACA CAAGAAAACTCAGAC CGATTC GTCTGAGTTTTTATG ATCTTAAATTTTCGA TERM 1904 1558731 - 1558702 - T 75 -8 -3.84587 | opp_overlap 1558699 1558707, overlap 1558707 AGTATTTAAACACAA GAAAACTCAGAC CGATTC GTCTGAGTTTTT ATGATCTTAAATTTT TERM 1905 1558726 - 1558707 - T 88 -7.9 -4.95302 | opp_overlap 1558699 1558707, overlap 1558702 TTAAACACAAGAAAA CTCAGAC CGATTC GTCTGAG TTTTTATGATCTTAA TERM 1906 1558707 - 1558726 + T 88 -7.9 -4.98436 | opp_overlap 1558707 1558702, overlap 1558699 TTAAACACAAGAAAA CTCAGAC CGATTC GTCTGAG TTTTTATGATCTTAA SPD_1536 1560004 - 1558730 - | hydroxymethylglutaryl-CoA reductase, degradative TERM 1907 1559919 - 1559971 + g 85 -6.6 -5.02074 | gap 3, opp_overlap 1559929 1559930 1559932, overlap 1559930 1559963 AGACTAGCTTGTCTC TCAGGACTAAGGAGCGCCT-GAGCT TTTAGC AGCTCGAGGCGCTC-TTGGTA-TGA TTTTTTAGAAAATCC TERM 1908 1559963 - 1559929 - G 79 -10.8 -3.21099 | gap 1, opp_overlap 1559919 1559930, overlap 1559930 1559932 GTCTCTCAGGACTAA GGAGCGCCT-GAGCT TTTAGC AGCTCGAGGCGCTCT TGGTATGATTTTTTA TERM 1909 1559962 - 1559930 - G 93 -14.3 -2.52516 | gap 1, opp_overlap 1559919 1559930, overlap 1559929 1559932 TCTCTCAGGACTAAG GAGCGCCT-GAGCT TTTAGC AGCTCGAGGCGCTC TTGGTATGATTTTTT TERM 1910 1559930 - 1559962 + g 100 -14.3 -3.40042 | gap 1, opp_overlap 1559930 1559929 1559932, overlap 1559919 TCTCTCAGGACTAAG GAGCGCCT-GAGCT TTTAGC AGCTCGAGGCGCTC TTGGTATGATTTTTT TERM 1911 1559960 - 1559932 - G 77 -11.1 -2.80016 | gap 1, opp_overlap 1559930 1559919, overlap 1559930 1559929 TCTCAGGACTAAGGA GCGCCT-GAGCT TTTAGC AGCTCGAGGCGC TCTTGGTATGATTTT mvaS 1561200 - 1560004 - | hydroxymethylglutaryl-CoA synthase TERM 1912 1561278 - 1561256 - R 93 -7.8 -5.53079 | opp_overlap 1561256 1561254 AAAAGAGAGAAAAAA GACTTGATTC ACC AAATCAAGCC TCTTATTGGTCATCA SPD_1538 1561594 - 1561307 - | hypothetical protein TERM 1913 1561681 - 1561723 + r 100 -11.6 -4.98531 | overlap 1561668 ATTCGTAATCCGAAG CGTTTACGATGATTTCGATA GGT TGTTGAAATCATTTTAAACG TTTTTACTTTGGCAA SPD_1540 1562760 - 1562311 - | hypothetical protein TERM 1914 1562414 - 1562427 + g 76 -6.7 -4.35483 | opp_overlap 1562407 ATGACAACCAAGGTC GCACT TGCC AGTGC TTTATTATAGTCCCC SPD_1541 1563520 - 1562762 - | hypothetical protein TERM 1915 1563578 - 1563603 + r 79 -9.1 -3.44825 | opp_overlap 1563578 TGGACTCAAAAAAAA TCTTTGCCATG AAAT CATGACAAAGA TTGATTACTCATTTT TERM 1916 1563603 - 1563578 - R 100 -11.3 -5.81412 | opp_overlap 1563578 TGGACTCAAAAAAAA TCTTTGCCATG AAAT CATGACAAAGA TTGATTACTCATTTT SPD_1542 1565614 - 1563635 - | serine/threonine protein kinase TERM 1917 1563808 - 1563824 + g 70 -8.1 -3.7282 | opp_overlap 1563811, overlap 1563811 CTTCCTTAATCCCAA CAATTTG AAT CAAATTG TTCTTAGTAAACTCC SPD_1543 1566351 - 1565611 - | phosphatase, putative sun 1567679 - 1566366 - | ribosomal RNA small subunit methyltransferase B fmt 1568607 - 1567672 - | methionyl-tRNA formyltransferase TERM 1918 1568013 - 1568037 + g 71 -7.1 -3.83026 | opp_overlap 1568013 TTGGAGAGAAGGTAA CCTGACTCGTA TCC TGCGGTTCAGG TTTGATATCACCAGC priA 1571016 - 1568620 - | primosome assembly protein PriA TERM 1919 1571084 - 1571061 - R 87 -6.8 -5.47159 | opp_overlap 1571061 TTGCAATAGAAAAAA TAAGATTGAG TCCC CCCAACCTTA AATTTTTTCACCATC SPD_1547 1571396 - 1571082 - | DNA-directed RNA polymerase subunit omega gmk 1572047 - 1571421 - | guanylate kinase SPD_1549 1573790 - 1572177 - | hypothetical protein TERM 1920 1573865 - 1573855 - R 82 -5.4 -5.31275 | TTCTACCATAAAAAA GTGA TTT TCAC AAACCTAAAATAGAA TERM 1921 1573980 - 1573963 - R 83 -6.3 -4.8667 | opp_overlap 1573963 GAGACTTGAGAAAAA GCCTACT TTAC AGTAGAC TTAGTAATGATCTTT SPD_1550 1574235 - 1573981 - | hypothetical protein SPD_1551 1574499 - 1574239 - | hypothetical protein TERM 1922 1574730 - 1574713 - R 70 -4.1 -4.77925 | AAAAAATCTCAAAAA GCCTACC TTTC AGTAGAC TTAGTTTGTTTCTAT SPD_1552 1575828 - 1574731 - | hypothetical protein SPD_1553 1576584 - 1575838 - | hypothetical protein TERM 1923 1576678 - 1576659 - R 89 -8.6 -4.63748 | opp_overlap 1576659 AAATAAGCAAAGAAA CCCAGTTG ACTA CAACTGAG TTCATCTTCTAAGCA SPD_1554 1577040 - 1576687 - | iojap-related protein SPD_1555 1577553 - 1577053 - | isochorismatase family protein SPD_1556 1578147 - 1577554 - | hypothetical protein nadD 1578776 - 1578147 - | nicotinic acid mononucleotide adenylyltransferase TERM 1924 1578246 - 1578228 - G 70 -8.8 -3.33815 | ACCTTGGGCAAGGAA GTCCCGCA CCA TGCTGGAC GAGATATCCATGAGC SPD_1558 1579139 - 1578828 - | hypothetical protein TERM 1925 1579243 - 1579224 - R 72 -5.8 -4.30576 | gap 1, opp_overlap 1579224 CTTTCATGACTAAAA TTTGAG-CC TAA GGTCTCAAA TTTTCCGCAGTTGGT SPD_1559 1580460 - 1579354 - | GTP-binding protein YqeH TERM 1926 1579384 - 1579410 + g 95 -12.2 -4.36262 | overlap 1579373 1579386 TCGTGTGACGACGGC GACGCCTTCTGG TGC CCAGACGGCGAC TTTTGCTATGCCTGT TERM 1927 1579386 - 1579408 + g 90 -13.4 -2.52138 | overlap 1579373 1579384 GTGTGACGACGGCGA CGCCTTCTGG TGC CCAGACGGCG ACTTTTGCTATGCCT SPD_1560 1580990 - 1580463 - | hypothetical protein TERM 1928 1580756 - 1580768 + g 76 -3.3 -5.31545 | CAAATTTCTCAACTG CTCGT TGA ACGCG TTTTTTGGTGTTATT SPD_1561 1581901 - 1581005 - | magnesium transporter, CorA family protein, putative SPD_1562 1582554 - 1581958 - | small conductance mechanosensitive ion channel (MscS) family protein TERM 1929 1583678 - 1583690 + G 79 -9.1 -3.8062 | overlap 1583664 GCTTCAGGTATTGCC GGAGG TTC CCTCC TTCTTATCCCAGTTG SPD_1563 1582907 - 1583866 + | dicarboxylate/amino acid:cation (Na+ or H+) symporter (DAACS) family protein SPD_1564 1583934 - 1584887 + | hypothetical protein TERM 1930 1585101 - 1585086 - g 73 -7.6 -3.97446 | AGAAAGAAATTGAAA GTCTCT TGGA AGAGAC CATTGCCCAACAGAG SPD_1565 1585031 - 1585411 + | transcriptional regulator, putative SPD_1566 1585429 - 1585731 + | hypothetical protein trx 1585748 - 1586062 + | thioredoxin TERM 1931 1586071 - 1586095 + F 93 -7.9 -5.4756 | opp_overlap 1586071 1586073 GAGCTAATCAAACGA GAGACCAAGTA CTT TCTTTGGTCTC TTTTTTCTTGCCCTT TERM 1932 1586309 - 1586324 + F 100 -10.4 -4.69664 | ATTTGGTATTTTTTA GCTCCC TAAT GGGAGC TTTTTGCGTGCTCTG SPD_1568 1586556 - 1586900 + | GTP cyclohydrolase, putative TERM 1933 1586997 - 1586985 - T 73 -7.7 -3.83205 | AGGTTGTAGATGAAA CTGAC GAA GTCAG CTTAAAACACTGTTT TERM 1934 1587042 - 1587030 - T 71 -7.7 -3.58905 | AGGTTGCAGATAGAA CTGAC GAA GTCAG ATCAAAACACTGTTT TERM 1935 1587087 - 1587075 - T 71 -7.7 -3.58905 | AGGTTGCAGATAGAA CTGAC GAA GTCAG CTTAAAACACTGTTT TERM 1936 1587132 - 1587120 - T 71 -7.7 -3.58905 | AGGTTGCAGATAGAA CTGAC GAA GTCAG CTTAAAACACTGTTT TERM 1937 1587177 - 1587165 - T 71 -7.7 -3.58905 | AGGTTGCAGATAGAA CTGAC GAA GTCAG ATCAAAACACTGTTT TERM 1938 1587365 - 1587337 - T 100 -13.9 -4.82667 | opp_overlap 1587337 GTATCATACGAAAAA GCCCTGTTCCTCA AGA TGAGGAGCAAGGC TTTTTGAGTTTCAAT TERM 1939 1587337 - 1587365 + T 100 -13.9 -4.81851 | opp_overlap 1587337 GTATCATACGAAAAA GCCCTGTTCCTCA AGA TGAGGAGCAAGGC TTTTTGAGTTTCAAT SPD_1569 1588048 - 1587380 - | aquaporin TERM 1940 1588082 - 1588072 - R 71 -5.4 -4.56597 | opp_overlap 1588072 TCCTTTTTTCAAAAA CTAG ATA CTAG TCTATCAAAAGTAGG SPD_1570 1588713 - 1588159 - | hypothetical protein SPD_1571 1590755 - 1588959 - | oligoendopeptidase F, putative TERM 1941 1590313 - 1590329 + g 86 -4.4 -5.46698 | gap 1 GCCTTCTCCACATCT GCCC-CT AAGT AGTGGGC TTTTTTGATTTTAGC SPD_1572 1591509 - 1590766 - | hypothetical protein prmA 1592461 - 1591511 - | ribosomal protein L11 methyltransferase SPD_1574 1593027 - 1592599 - | MutT/nudix family protein SPD_1575 1594096 - 1592993 - | hypothetical protein SPD_1576 1594585 - 1594115 - | hypothetical protein TERM 1942 1594240 - 1594229 - G 73 -5.8 -4.56597 | TGGGTCTTCCAAAAA GTCC ATGA GGAC ATCTAGCCCAACCTC TERM 1943 1594700 - 1594724 + r 70 -4.3 -4.65078 | overlap 1594723 TTATACCATATTACC TCATTTAAACC CTT GGTATCAATGA TTTTCTTAAAAGTCT TERM 1944 1594788 - 1594775 - R 79 -5.2 -5.16206 | AAATCAATATAAAAA GCCC GCGAAA GGGC TAATAAATCTATAAA SPD_1577 1595328 - 1594876 - | hypothetical protein TERM 1945 1595600 - 1595568 - R 73 -8.5 -3.21593 | opp_overlap 1595577 1595579, overlap 1595566 1595577 1595579 TACCTCCTGACAACA CCATTATAACACGTG TTA CACGTATTGTAAAGG AGTGATACTTATTAT SPD_1578 1595860 - 1595681 - | hypothetical protein SPD_1579 1596264 - 1596025 - | hypothetical protein SPD_1580 1596534 - 1597805 + | recombination factor protein RarA TERM 1946 1598162 - 1598178 + T 84 -3.7 -5.64006 | overlap 1598153 AATACAACAGGAAAA GTCTTAT AAT ATAGGGC TTTTTTTGCTTAAAT TERM 1947 1598323 - 1598294 - T 90 -8 -5.28983 | opp_overlap 1598294 CCCAAAACACAAAAA GTCCTCTTTCCA CTATTT TAGAAAGAGAAC TTTTTCTTTAGGAGA TERM 1948 1598294 - 1598323 + T 76 -3.6 -5.27335 | opp_overlap 1598294 CCCAAAACACAAAAA GTCCTCTTTCCA CTATTT TAGAAAGAGAAC TTTTTCTTTAGGAGA SPD_1582 1599671 - 1598352 - | sucrose-6-phosphate hydrolase, putative TERM 1949 1599219 - 1599234 + g 73 -7.6 -4.11773 | overlap 1599233 ATCTGGCAAGTCTGA TCCAGT TGCA ACTGGA TTTTGGGAAATCTTT TERM 1950 1599294 - 1599304 + g 76 -2.4 -5.49234 | CATATTTTGCACTTG GCGG ACA CCGG TTTTTTCTTCGATAT SPD_1583 1600526 - 1599681 - | ABC transporter, permease protein TERM 1951 1599767 - 1599752 - G 78 -7.6 -4.41353 | CTACATAGACCAAAA TCAACG GAAT CGTTGA AATAGTTAATACAGC SPD_1584 1601430 - 1600528 - | ABC transporter, permease protein SPD_1585 1602836 - 1601526 - | ABC transporter, sugar-binding protein TERM 1952 1602852 - 1602863 + r 89 -3 -5.88476 | CATTTTCCTCCTTTT TGAA ACGT TTCA TTTTTTATTTATTTT SPD_1586 1603958 - 1602963 - | sugar-binding transcriptional regulator, LacI family protein TERM 1953 1604125 - 1604140 + r 79 -4.6 -5.27399 | opp_overlap 1604125 1604120 CATAAAACAGGAAAA GCCTTG GTTT CATGGC TTTTTTCATATCTTC TERM 1954 1604280 - 1604240 - R 77 -4.9 -5.06414 | opp_overlap 1604244 1604251, overlap 1604242 TTTTCTTAACAAAAA CACCCTAAAAATTAGAC TTTTTCT GTCTAACTTTTGAGGTA CAGTTCAAACGCGAA SPD_1587 1605801 - 1604320 - | transcriptional activator, putative TERM 1955 1605368 - 1605346 - G 70 -2.6 -5.02476 | opp_overlap 1605362 ATATTGTGCAAAAAA GTAACGAATG TCT CTCTCGTTTC CAATGATTTGAACAG SPD_1588 1606491 - 1607057 + | hypothetical protein TERM 1956 1607046 - 1607036 - f 84 -5.4 -5.46706 | ACCTCAAAACAAAAA GACT GTT AGTC GTGTGAAGTAAGGAA SPD_1589 1607069 - 1607239 + | hypothetical protein SPD_1590 1607278 - 1607886 + | general stress protein 24, putative SPD_1591 1607917 - 1608120 + | hypothetical protein TERM 1957 1608226 - 1608197 - T 93 -7.3 -5.54907 | gap 1, opp_overlap 1608197 CTCAGAAAACAAAAA GCTAGAGATTCC CAATTGC GGAA-CTCTAGC TTTTTAATTTTGCCT TERM 1958 1608197 - 1608226 + T 88 -7.3 -5.10154 | gap 1, opp_overlap 1608197 CTCAGAAAACAAAAA GCTAGAGATTCC CAATTGC GGAA-CTCTAGC TTTTTAATTTTGCCT SPD_1592 1609093 - 1608647 - | acetyltransferase, GNAT family protein TERM 1959 1608697 - 1608715 + g 72 -4.6 -4.73388 | opp_overlap 1608694, overlap 1608674 1608694 1608714 GTGCTTCAACCATTT GAACGATT TCA AATCCTTC TTTTTGGTAAAGATT TERM 1960 1609758 - 1609747 - g 86 -4.4 -5.45802 | opp_overlap 1609747, overlap 1609748 CCTGCAAAAGAAAAA GGAA AGAC TTCC TTTCGTGCCTTTCCT SPD_1593 1609163 - 1609822 + | type IV prepilin peptidase, putative SPD_1594 1611025 - 1609874 - | transcriptional regulator TERM 1961 1610350 - 1610325 - G 86 -4.7 -5.4505 | opp_overlap 1610331, overlap 1610328 TTTGGCAATAAAAAA CATGATGCAAA ATAA TTTGCTTCTTG CTCCAAACGATCGCC SPD_1595 1611771 - 1611040 - | hypothetical protein TERM 1962 1611283 - 1611295 + g 80 -6.3 -4.77759 | TAAAATCATAAATTT TTCGA TAT TCGAA TTTTTAGTAGCTTGT TERM 1963 1612037 - 1612026 - R 82 -4.4 -5.45802 | opp_overlap 1612026, overlap 1612004 1612003 1612000 1612027 CCTGCAAAAGAAAAA GGAA AGAC TTCC TTTCGTGCCTTTCCT trpA 1612849 - 1612073 - | tryptophan synthase subunit alpha TERM 1964 1612117 - 1612135 + g 91 -10.3 -4.55826 | TAAAGTCCTGAATCG GCTCTCC TTGGT GGAGAGC TTTTACTATTTTCGA trpB 1614065 - 1612842 - | tryptophan synthase subunit beta TERM 1965 1613838 - 1613865 + g 81 -5.5 -5.1101 | CCGTTTGAGATAAAT CTTGGCTCCGC CGATAT GCTGGGTCAAG TTTTTTGCGTAGTAA trpF 1614642 - 1614043 - | N-(5'-phosphoribosyl)anthranilate isomerase TERM 1966 1614575 - 1614563 - G 74 -4.8 -4.78848 | GGTGCAAAGACAAAA CCGA TATAG TCGG CTCCTGCTGAAACGG trpC 1615396 - 1614629 - | indole-3-glycerol-phosphate synthase trpD 1616397 - 1615393 - | anthranilate phosphoribosyltransferase TERM 1967 1615906 - 1615881 - G 70 -8.5 -3.36968 | gap 1 CAGTCAAGTTCATAA TCGT-TGGAATT CCC AATTCCAAACGA GCTGGCATGATGTAT trpG 1616974 - 1616408 - | anthranilate synthase component II trpE 1618332 - 1616971 - | anthranilate synthase component I TERM 1968 1618411 - 1618384 - R 100 -12.8 -4.7373 | CGACTGTATGAAAAA TCCCCACGCAAA ATAA CTTGCGTGAGGA CGAAATTCGCGGTGC SPD_1603 1618622 - 1618467 - | hypothetical protein SPD_1604 1618745 - 1618626 - | hypothetical protein TERM 1969 1618781 - 1618793 + r 71 -7.7 -3.58905 | CCGTAGGTATGGTTA CTGAC TTC GTCAG TTCTATCTGCAACCT TERM 1970 1618870 - 1618852 - R 78 -10.4 -2.61383 | overlap 1618851 AGTTCTATCCACAAC CTCAAAAC AGT GTTTTGAG CAGCCTGCGGCTAGT TERM 1971 1619053 - 1619087 + r 71 -8.5 -3.14564 | opp_overlap 1619054 CGACGGATAGAAAAA AGCCCACACACAGAA TATAC TTCCGTGTGAGGGCG TTGGTAACGCGGTGC TERM 1972 1619086 - 1619054 - R 100 -14.2 -5.38047 | opp_overlap 1619053 GACGGATAGAAAAAA GCCCACACACAGAA TATAC TTCCGTGTGAGGGC GTTGGTAACGCGGTG TERM 1973 1619132 - 1619114 - R 78 -10.4 -2.73364 | opp_overlap 1619112 1619118, overlap 1619118 GTGCCACCTCAATTA TAAAGGGA CTA TCCCTTTA CATCTCTGCCTTGTT SPD_1605 1620520 - 1619519 - | sugar-binding transcriptional regulator, LacI family protein TERM 1974 1620813 - 1620827 + r 80 -2.9 -5.63517 | TGTCAATGTAACATT TTAAC ATAGA GTTAA TTTTTTCTTTAAAGA TERM 1975 1621048 - 1621028 - R 74 -5.5 -4.69027 | AAATCTACTCAAAAA TTAGATGAT TAA AACATCTAA AAAACAAAAGGACAA TERM 1976 1621080 - 1621053 - R 100 -10 -5.19916 | opp_overlap 1621053, overlap 1621058 AAAACATCTAAAAAA CAAAAGGACAAA AACA TCTGTCCCTTTG TTTACTAAATTTCAG TERM 1977 1621075 - 1621058 - R 87 -6.3 -5.43553 | opp_overlap 1621053, overlap 1621053 ATCTAAAAAACAAAA GGACAAA AACA TCTGTCC CTTTGTTTACTAAAT SPD_1606 1621802 - 1621092 - | MgtC/SapB family protein SPD_1607 1623496 - 1621805 - | ABC transporter, permease protein TERM 1978 1622095 - 1622085 - G 84 -6.8 -4.95758 | ATCATAGTATAAAAA GGTG AAG CACC CATACTTCTTGCTGC SPD_1608 1624518 - 1623508 - | ABC transporter ATP-binding protein SPD_1609 1625688 - 1624621 - | ABC transporter, substrate-binding protein SPD_1610 1626372 - 1625713 - | hypothetical protein SPD_1611 1626613 - 1626500 - | hypothetical protein galE-2 1627562 - 1626582 - | UDP-glucose 4-epimerase galT-1 1629050 - 1627575 - | galactose-1-phosphate uridylyltransferase SPD_1614 1629704 - 1629063 - | phosphate transport system regulatory protein PhoU, putative TERM 1979 1629350 - 1629364 + g 72 -4.4 -4.6635 | CTTCATGAAGTATTT TTATTT CTG AAATAA TTTTCTTCAAAATTT SPD_1615 1630256 - 1629762 - | hypothetical protein SPD_1616 1630613 - 1630317 - | hypothetical protein SPD_1617 1632723 - 1630597 - | cell wall surface anchor family protein TERM 1980 1632926 - 1632938 + H 71 -7.7 -3.54951 | overlap 1632912 CCTAAGTCTAGGTTA CTGAC TTG GTCAG TTCTATAGTAGACTG TERM 1981 1633363 - 1633347 - H 75 -5.1 -4.8543 | TAACCTCGATAAAAA TAGATGC AGT GCTTCTA AAATACTGGAATAGG TERM 1982 1633616 - 1633577 - H 100 -8.7 -6.34616 | opp_overlap 1633577 TGAAAACAAAAAAAA GACGCTAGTTTCCACAA TCTCAC TCATGGAAACTCACGTC TTTCAAAAAATAGGG TERM 1983 1633785 - 1633764 - g 71 -3.7 -4.90296 | overlap 1633765 1633766 AAAATCCTATAAAAA TTCTCTCTC TGAG GAGAAAGAG GCCTCAACTACAGGT SPD_1618 1633669 - 1633845 + | hypothetical protein SPD_1619 1635113 - 1633887 - | capsular polysaccharide biosynthesis protein, putative TERM 1984 1634253 - 1634239 - G 71 -6.4 -4.1585 | CGAGAACCTGCAAAA CCACTA TCA TAGCGG TCCACAATGTCCTTA SPD_1620 1635848 - 1635156 - | glycosyl transferase, putative TERM 1985 1635543 - 1635560 + g 78 -4.1 -5.252 | opp_overlap 1635529, overlap 1635544 ACGGCTATCGTTAGC AGAAGTC ACCA GACTTCC TTTTTTATCCGCATC SPD_1621 1637772 - 1636021 - | ABC transporter, ATP-binding/permease protein TERM 1986 1636432 - 1636420 - G 79 -9.1 -3.92075 | overlap 1636407 ATCTGCATCCACAAA GGCTG CCG CAGCC TGAACCTGCTCATCA SPD_1622 1639507 - 1637762 - | ABC transporter, ATP-binding/permease protein TERM 1987 1639593 - 1639613 + r 72 -8.3 -3.35996 | overlap 1639586 1639594 AACTAGCCGCAGGCT GCTCAAAGC ACT GCTTTGAGG TTGTAGATAGAACTG TERM 1988 1639594 - 1639612 + r 84 -11.8 -2.61383 | overlap 1639586 1639593 ACTAGCCGCAGGCTG CTCAAAGC ACT GCTTTGAG GTTGTAGATAGAACT TERM 1989 1639638 - 1639626 - R 71 -7.7 -3.58905 | AGGTTGTAGATAGAA CTGAC GAA GTCAG TAACCTACATACGGC SPD_1623 1640165 - 1639635 - | hypothetical protein SPD_1624 1640431 - 1640162 - | hypothetical protein SPD_1625 1640618 - 1640391 - | hypothetical protein TERM 1990 1641001 - 1641013 + G 73 -7.7 -3.85698 | CGTAAAGGCTATGCT GGAAC CAT GTTCC TTTATAAGAAAGAAC TERM 1991 1641248 - 1641232 - g 89 -5.8 -5.42975 | CTAGACAAAGAAAAA CCAGTC CTTGC GACCGG TGACTACAACGTAGC xth 1640752 - 1641579 + | exodeoxyribonuclease III TERM 1992 1642013 - 1642050 + F 93 -9.3 -4.46212 | opp_overlap 1642013 TTAAAGTTAGAAAAA GGCATATTGTCAGGTGT CTAA AAACTTGATAGTATGCC TTTTATGATGGAAAA TERM 1993 1642139 - 1642196 + F 100 -14.5 -4.05229 | gap 1, opp_overlap 1642133 1642158, overlap 1642134 1642147 1642148 TATATGATACTGACT CTGTCAATTCTATCCACAACCTCAAAAC AGT GTTTTGAGGTTGTGGATAGC-TTCCTAG TTTGCTCTTTGATTT TERM 1994 1642147 - 1642189 + F 100 -23.8 -3.34629 | opp_overlap 1642158, overlap 1642139 1642148 ACTGACTCTGTCAAT TCTATCCACAACCTCAAAAC AGT GTTTTGAGGTTGTGGATAGC TTCCTAGTTTGCTCT TERM 1995 1642148 - 1642188 + F 100 -27.3 -2.60054 | opp_overlap 1642158, overlap 1642147 1642139 CTGACTCTGTCAATT CTATCCACAACCTCAAAAC AGT GTTTTGAGGTTGTGGATAG CTTCCTAGTTTGCTC TERM 1996 1642178 - 1642158 - f 93 -12.7 -3.36803 | opp_overlap 1642148 1642147 1642139 CAATTCTATCCACAA CCTCAAAAC AGT GTTTTGAGG TTGTGGATAGCTTCC TERM 1997 1642482 - 1642506 + F 95 -8.7 -5.19916 | CATGTCTATTTAGGG GACTTACTTAG AGA TTAAGTAGGTC TTTTTTGAATATTTT TERM 1998 1642647 - 1642661 + F 78 -7.2 -4.34402 | opp_overlap 1642647 AGGCTTAGGCTAAAA TAGTTC CCC GAACTA TTTTACTCTCAAAAA TERM 1999 1642661 - 1642647 - f 75 -7.2 -4.13945 | opp_overlap 1642647 AGGCTTAGGCTAAAA TAGTTC CCC GAACTA TTTTACTCTCAAAAA xpt 1642851 - 1643432 + | xanthine phosphoribosyltransferase pbuX 1643432 - 1644694 + | xanthine permease TERM 2000 1644701 - 1644714 + T 79 -4.5 -5.36441 | opp_overlap 1644695 1644701 AAGAAATAAGAAAAA GAGGT GCGA GCCTC TTTTTTGTGTGACAA TERM 2001 1644714 - 1644701 - T 79 -3.8 -5.44198 | opp_overlap 1644701, overlap 1644695 AAGAAATAAGAAAAA GAGG TGCGAG CCTC TTTTTTGTGTGACAA SPD_1630 1645206 - 1644745 - | hypothetical protein SPD_1631 1645967 - 1645203 - | Dam-replacing family protein TERM 2002 1646140 - 1646115 - R 100 -11.3 -5.04601 | opp_overlap 1646114 1646113 1646115 CTCATAAATTAAAAA TGAGTGAGATA AATT TATCCCACTCA CCTTTCTTTATATAC TERM 2003 1646115 - 1646140 + r 72 -9.1 -2.61322 | opp_overlap 1646115, overlap 1646114 1646113 CTCATAAATTAAAAA TGAGTGAGATA AATT TATCCCACTCA CCTTTCTTTATATAC SPD_1632 1646552 - 1646148 - | hypothetical protein galT-2 1648103 - 1646622 - | galactose-1-phosphate uridylyltransferase TERM 2004 1646739 - 1646759 + g 86 -4.7 -5.38958 | opp_overlap 1646739 GATAGCACCCACAGA GTCCTTG ACGATTG CAAGGGC TTTTTCTTTATCCGT TERM 2005 1647536 - 1647526 - G 73 -6.8 -4.17023 | opp_overlap 1647525, overlap 1647515 CCAACCATTTCAAAA CGGA TAA TCCG GTGGTTGCTGCGAGC galK 1649300 - 1648122 - | galactokinase TERM 2006 1649750 - 1649732 - g 82 -3.8 -5.49569 | overlap 1649734 TAGGAATAGAAAAAA GAGCCCAA GAG TTGGACTA CGATATCTTGCGCTA TERM 2007 1649748 - 1649734 - g 74 -6.4 -4.36863 | overlap 1649732 GGAATAGAAAAAAGA GCCCAA GAG TTGGAC TACGATATCTTGCGC galR 1649464 - 1650471 + | galactose operon repressor TERM 2008 1650512 - 1650486 - T 93 -7.5 -5.5208 | gap 1, opp_overlap 1650486 GGATAACATAAAAAA CGAATA-GAGTT CTAA AACTCCTATTCG TTTTTTATTCGATTA TERM 2009 1650486 - 1650512 + T 93 -7.5 -5.5074 | gap 1, opp_overlap 1650486 GGATAACATAAAAAA CGAATA-GAGTT CTAA AACTCCTATTCG TTTTTTATTCGATTA SPD_1636 1651554 - 1650517 - | alcohol dehydrogenase, zinc-containing SPD_1637 1651908 - 1651555 - | transcriptional regulator, MerR family protein SPD_1638 1653042 - 1652152 - | cation efflux system protein SPD_1639 1653175 - 1653711 + | transcriptional regulator, TetR family protein TERM 2010 1653801 - 1653774 - T 71 -7.8 -3.62046 | opp_overlap 1653779, overlap 1653779 TTATCTTTTCAACAA CAAAAGAGGACC CGCC GATCCTCTTTTT CATACTATAAATCCT TERM 2011 1653796 - 1653779 - T 88 -7.7 -4.89477 | opp_overlap 1653779, overlap 1653774 TTTTCAACAACAAAA GAGGACC CGCC GATCCTC TTTTTCATACTATAA TERM 2012 1653779 - 1653796 + T 74 -5.5 -4.79223 | opp_overlap 1653779 1653774 TTTTCAACAACAAAA GAGGACC CGCC GATCCTC TTTTTCATACTATAA pnuC 1654684 - 1653878 - | nicotinamide mononucleotide transporter PnuC, putative TERM 2013 1654965 - 1654948 - R 79 -4.1 -5.21709 | opp_overlap 1654948 1654961 1654964 TCTCACATCAAAAAA GCCCA GACGAAAT TGGGC TCTATAATATTTGTA TERM 2014 1654961 - 1655014 + r 100 -9.2 -4.96848 | gap 1, opp_overlap 1654948, overlap 1654948 1654964 AAGCCCAGACGAAAT TGGGCTCTATAATATTTGTAGTGGG TAAAT CCC-CTATGGATATTATGGAGCTTA TTTTTGTGTAGAAAA TERM 2015 1654964 - 1655011 + r 100 -10.9 -4.58943 | gap 1, opp_overlap 1654948, overlap 1654948 1654961 CCCAGACGAAATTGG GCTCTATAATATTTGTAGTGGG TAAAT CCC-CTATGGATATTATGGAGC TTATTTTTGTGTAGA TERM 2016 1655820 - 1655806 - R 77 -8.6 -3.57263 | opp_overlap 1655806 AGGCTCAGGCTGAAA CAGTCT CCC AGACTG TTTCACTCCCGAATG TERM 2017 1655806 - 1655820 + r 77 -8.6 -3.6502 | opp_overlap 1655806 AGGCTCAGGCTGAAA CAGTCT CCC AGACTG TTTCACTCCCGAATG TERM 2018 1656394 - 1656372 - R 100 -13.6 -5.27779 | opp_overlap 1656376 CTGAATATCAAAAAA GAAAGGACAA AAT TTGTCCTTTC TCGAGCTTAGCTTTT TERM 2019 1656376 - 1656390 + r 79 -8.6 -3.89614 | opp_overlap 1656372 ATATCAAAAAAGAAA GGACAA AAT TTGTCC TTTCTCGAGCTTAGC proWX 1658033 - 1656513 - | choline transporter (glycine betaine transport system permease protein) proV 1658754 - 1658026 - | choline transporter TERM 2020 1658721 - 1658737 + g 86 -7.3 -5.10767 | overlap 1658734 AGACATCCTTTTCTG TGTAGCG CAG TGCTACA TTTTTGTATTCAATC SPD_1644 1659533 - 1658769 - | hypothetical protein SPD_1645 1659980 - 1659537 - | transcriptional regulator, MarR family protein TERM 2021 1660642 - 1660669 + r 100 -10.8 -4.11751 | gap 1, opp_overlap 1660642 AGATCTTACAAAAAA TGCTTTGA-TCCA CAA TGGAATCAAAGCA TTTTAAAGAGTTCCT TERM 2022 1660669 - 1660642 - R 100 -10.8 -5.26918 | gap 1, opp_overlap 1660642 AGATCTTACAAAAAA TGCTTTGA-TCCA CAA TGGAATCAAAGCA TTTTAAAGAGTTCCT SPD_1646 1660958 - 1660662 - | hypothetical protein pepA 1662044 - 1660980 - | glutamyl aminopeptidase PepA SPD_1648 1662445 - 1663146 + | NAD-dependent epimerase/dehydratase family protein TERM 2023 1663288 - 1663277 - f 74 -2.2 -5.40004 | TACTAAATTAAAAAA TCCC ACAC GAGA TTGTTGCTCGACGTG TERM 2024 1664248 - 1664274 + G 72 -10.2 -2.73681 | AACTGGCCCTCTTTC TGGTGGCGCT AACGACA AGCGTCACCA TGATTACCGTGGGTG SPD_1649 1663569 - 1664528 + | iron-compound ABC transporter, permease protein SPD_1650 1664518 - 1665474 + | iron-compound ABC transporter, permease protein TERM 2025 1665828 - 1665814 - g 74 -4.2 -5.04987 | opp_overlap 1665814, overlap 1665803 AAGACTGGGAAAAAA TCCGAG AAA CTCTGA ATTATTTGGAACTGA SPD_1651 1665471 - 1666223 + | iron-compound ABC transporter, ATP-binding protein TERM 2026 1666851 - 1666835 - g 74 -3.7 -5.01497 | ACTAGTACACAAAAA GCCAA GGAAGAA TTGGC CAAGCTAGACAAGAG TERM 2027 1666958 - 1666941 - g 82 -6.3 -4.93547 | gap 1, opp_overlap 1666949 TTAATGAAGGAAAAA TGGCAGCC TTT GG-TGCCA AATCTCGTTTCTCTT SPD_1652 1666319 - 1667284 + | iron-compound ABC transporter, iron-compound-binding protein TERM 2028 1667439 - 1667476 + T 100 -15.8 -5.09245 | opp_overlap 1667439 TTTGACATTCTAAAA CGCATCCTATCAAGTT CACTCA AACCTGATAGGATGCG TTTTTATCATTTTGA TERM 2029 1667476 - 1667439 - T 100 -18.7 -4.16943 | opp_overlap 1667439 TTTGACATTCTAAAA CGCATCCTATCAAGTTC ACTC AAACCTGATAGGATGCG TTTTTATCATTTTGA SPD_1653 1667751 - 1667509 - | hypothetical protein TERM 2030 1667733 - 1667722 - G 73 -7.2 -4.10855 | opp_overlap 1667722 AAAACGTTGGTAAAA GCGC ACAA GCGC TATTAAAATTCGTTT rluB 1668473 - 1667751 - | ribosomal large subunit pseudouridine synthase B scpB 1669029 - 1668460 - | segregation and condensation protein B scpA 1669776 - 1669048 - | segregation and condensation protein A xerD 1670516 - 1669776 - | site-specific tyrosine recombinase XerD-like protein SPD_1658 1670968 - 1670507 - | CBS domain-containing protein SPD_1659 1671486 - 1670965 - | hypothetical protein SPD_1660 1672433 - 1671462 - | fused deoxyribonucleotide triphosphate pyrophosphatase/unknown domain-containing protein murI 1673224 - 1672430 - | glutamate racemase TERM 2031 1672544 - 1672521 - G 71 -5.2 -4.56597 | GCTGTTGTGTAAAAA CGGTGATGGA GTGG TCCAGCATCG CGACCACGATTGATT TERM 2032 1673390 - 1673429 + r 80 -5.1 -5.29208 | opp_overlap 1673399, overlap 1673394 AAACCATAACCAACA TAGTGAGAAGTCTGGAA CTTTCA TCCCAGACTTTTCCTTA TTTATTTTTTCTTTT TERM 2033 1673394 - 1673425 + r 70 -8.1 -3.33489 | opp_overlap 1673399, overlap 1673390 CATAACCAACATAGT GAGAAGTCTGGAA CTTTCA TCCCAGACTTTTC CTTATTTATTTTTTC SPD_1662 1673679 - 1673431 - | hypothetical protein TERM 2034 1673746 - 1673722 - R 75 -10.1 -2.66316 | opp_overlap 1673722, overlap 1673726 CCTTTCATTATACCA CAAACTAGCCA CCC TGACCAGTTTG TTCTACACTTTCAAG treC 1675446 - 1673821 - | alpha,alpha-phosphotrehalase TERM 2035 1674441 - 1674454 + g 73 -6.7 -4.2349 | CTAGCATGGTGGCTC CTTCC TTGC GGAAG TTTTGAATATCGACA TERM 2036 1675492 - 1675470 - R 89 -8.5 -4.36914 | gap 1, opp_overlap 1675447 1675468 1675470 CCTTTTCTGATAAAA GGGA-GGAAG CAGT CTTCCGTCCC TATTTGTGCTATTTC TERM 2037 1675470 - 1675492 + r 77 -8.5 -3.63897 | gap 1, opp_overlap 1675470, overlap 1675447 1675468 CCTTTTCTGATAAAA GGGA-GGAAG CAGT CTTCCGTCCC TATTTGTGCTATTTC SPD_1664 1677591 - 1675624 - | PTS system, trehalose-specific IIABC components TERM 2038 1677603 - 1677638 + H 79 -10 -3.30124 | overlap 1677607 1677611 CCATTTGATTCTCCT TATACTTGTCAAAGCA AGTT TGATTTGATAAGTATA TTGTAAACGATACCA treR 1677776 - 1678486 + | trehalose operon repressor TERM 2039 1678516 - 1678484 - T 74 -6.4 -4.32607 | opp_overlap 1678489 1678491, overlap 1678489 GCAAAACGCAAGAAA TAAAAGACTGAGAC ACCAG ATCTCAGCCTTTTT CGGCTCTATAATATT TERM 2040 1678511 - 1678489 - T 84 -6.3 -5.10665 | opp_overlap 1678489 1678491, overlap 1678484 ACGCAAGAAATAAAA GACTGAGAC ACCAG ATCTCAGCC TTTTTCGGCTCTATA TERM 2041 1678516 - 1678569 + T 100 -9.2 -4.96848 | gap 1, overlap 1678518 AGATCTCAGCCTTTT TCGGCTCTATAATATTTGTAGTGGG TAAAT CCC-TTATAGATATTATGGAGCCTA TTTTTGTGTAGAAAA TERM 2042 1678518 - 1678567 + T 100 -11.8 -4.11141 | gap 1, overlap 1678516 ATCTCAGCCTTTTTC GGCTCTATAATATTTGTAGTGGG TAAAT CCC-TTATAGATATTATGGAGCC TATTTTTGTGTAGAA TERM 2043 1679355 - 1679341 - T 77 -8.6 -3.57263 | opp_overlap 1679341 AGGCTCAGGCTGAAA CAGTCT CCC AGACTG TTTCACTCCCGAATG TERM 2044 1679341 - 1679355 + T 77 -8.6 -3.6502 | opp_overlap 1679341 AGGCTCAGGCTGAAA CAGTCT CCC AGACTG TTTCACTCCCGAATG TERM 2045 1679938 - 1679916 - T 100 -9.2 -5.27779 | opp_overlap 1679920 TTGAACATCAAAAAA GAAAGGACGA AAT TTGTCCTTTC TCGAGCTTAGCTGAC amiF 1680949 - 1680023 - | oligopeptide ABC transporter, ATP-binding protein AmiF TERM 2046 1680829 - 1680851 + g 70 -9.2 -3.14881 | opp_overlap 1680832, overlap 1680832 TACCGGACTCACCTA CAAGCGAGAA AGT TTCTCCCTTG TTGATAAAGAAGTTA TERM 2047 1680895 - 1680911 + g 72 -9.5 -2.99251 | overlap 1680894 CGACAAACTTCTTAC TTCCTTC ACC GAAGGAA ATTTCTAAATCTTTG TERM 2048 1680973 - 1680985 + r 77 -4.8 -5.02476 | TCCTAGTCAGCCAGA TGGG CAAAT CCCA TTTTTTCACGGATCT amiE 1682027 - 1680960 - | oligopeptide ABC transporter, ATP-binding protein AmiE amiD 1682962 - 1682036 - | oligopeptide ABC transporter, permease protein AmiD amiC 1684458 - 1682962 - | oligopeptide ABC transporter, permease protein AmiC TERM 2049 1684519 - 1684476 - R 84 -8.4 -4.57073 | gap 1, opp_overlap 1684484 1684487 1684509, overlap 1684478 1684484 TATTTCCTTTAAAAA TCCCAAAAGAACCTTCTCCTC ATG GAG-AGAAAGTTCTATTAGAA ATTATTTACTTCACA TERM 2050 1684511 - 1684484 - R 89 -8.6 -4.31329 | gap 1, opp_overlap 1684484 1684487 1684509, overlap 1684478 1684476 TTAAAAATCCCAAAA GAACCTTCTCCTC ATG GAG-AGAAAGTTC TATTAGAAATTATTT amiA 1686504 - 1684525 - | oligopeptide ABC transporter, oligopeptide-binding protein AmiA TERM 2051 1684739 - 1684725 - G 73 -10 -2.9162 | CAATTCGTGAAAGCA CTGGTG CTG CACCAG AAGAAGCCATAGCAG TERM 2052 1687153 - 1687173 + r 73 -8.3 -3.62591 | opp_overlap 1687153 CATCGTATAAAAAAA TCTCCTACC CAA GGTAGAAGA TTTCAAACTTATAAA TERM 2053 1687173 - 1687153 - R 100 -10.5 -5.626 | opp_overlap 1687153 CATCGTATAAAAAAA TCTCCTACC CAA GGTAGAAGA TTTCAAACTTATAAA SPD_1672 1688384 - 1687191 - | hypothetical protein TERM 2054 1688211 - 1688189 - G 79 -4.8 -5.12068 | overlap 1688183 1688192 1688195 TATAGCTAAGAAAAA GAAGCAGCAT CGG ATGCTCCCCC ATTTTCTGAAGAATA TERM 2055 1688208 - 1688192 - G 71 -5.1 -4.64495 | overlap 1688189 1688183 1688195 AGCTAAGAAAAAGAA GCAGCAT CGG ATGCTCC CCCATTTTCTGAAGA TERM 2056 1688484 - 1688472 - R 80 -6.3 -4.68655 | CAATTTGAAAACAAA GGAAA CGT TTTCC AAAATAAAAACCCTA gtfA 1689964 - 1688522 - | sucrose phosphorylase SPD_1674 1690315 - 1690148 - | hypothetical protein TERM 2057 1690230 - 1690242 + g 70 -7.7 -3.72695 | CCGTAGGTATGGTTA CTGAC TTC GTCAG TTTCATCCACAACCT TERM 2058 1690274 - 1690256 - G 72 -10.4 -2.61383 | overlap 1690255 AGTTTCATCCACAAC CTCAAAAC AGT GTTTTGAG CAACCTGCGGCTAGC rafG 1691155 - 1690322 - | sugar ABC transporter, permease protein rafF 1692035 - 1691169 - | sugar ABC transporter, permease protein rafE 1693308 - 1692049 - | sugar ABC transporter, sugar-binding protein TERM 2059 1693344 - 1693397 + r 95 -15 -2.93109 | gap 1, opp_overlap 1693348 TTTATACACCCTTAT TGAACTGCACCCCAAAAGTTAGA CAGAATAAA TCTAACTTTTGGGGT-CAGTACA TATCATAGTTTTCTA TERM 2060 1693393 - 1693348 - R 100 -15.1 -3.06501 | gap 1, opp_overlap 1693344 TACACCCTTATTGAA CTGCACCCCAAAAGTTAGAC AGAATAA ATCTAACTTTTGGGGT-CAG TACATATCATAGTTT aga 1695562 - 1693400 - | alpha-galactosidase AgaN msmR 1695670 - 1696530 + | msm operon regulatory protein MsmR TERM 2061 1697209 - 1697184 - g 90 -4.8 -5.54338 | gap 1, opp_overlap 1697181 1697184, overlap 1697202 GAATTAAAAGAAAAA GCTGCCAGCTT ATTTA AAGCTA-CAGC TCCTATAACAAGGAA SPD_1680 1696527 - 1697462 + | biotin--protein ligase TERM 2062 1697544 - 1697597 + T 88 -7 -4.96848 | gap 1, overlap 1697546 GGATCTGAAGTTTTA TTGTCTCTATAATATTTGTAGTGGG TAAAT CCC-CTATAGATATTATGGAGCCTA TTTTTGTGTAGAAAA TERM 2063 1697546 - 1697595 + T 93 -9.6 -4.11141 | gap 1, overlap 1697544 ATCTGAAGTTTTATT GTCTCTATAATATTTGTAGTGGG TAAAT CCC-CTATAGATATTATGGAGCC TATTTTTGTGTAGAA TERM 2064 1698097 - 1698075 - T 100 -13.6 -5.27779 | opp_overlap 1698079 TTGAACATCAAAAAA GAAAGGACAA AAT TTGTCCTTTC TCGAGCTTAGCTTTT TERM 2065 1698079 - 1698093 + T 79 -8.6 -3.89614 | opp_overlap 1698075 ACATCAAAAAAGAAA GGACAA AAT TTGTCC TTTCTCGAGCTTAGC TERM 2066 1698170 - 1698148 - T 100 -9.2 -5.18561 | opp_overlap 1698152 CAAAGAGCCAAAAAA GAAAGGACGA AAT TTGTCCTTTC TCGAGCTTAGCTTTT TERM 2067 1698306 - 1698290 - T 100 -9.5 -5.93252 | opp_overlap 1698292 TCTAAAAATAAAAAA GAGAGTT ACA AACTCTC ATTAAAACGGAGAAT TERM 2068 1699329 - 1699349 + T 79 -9.7 -3.31263 | overlap 1699331 ATTCGAACCCGCGAC CCCCACCTT GGC AAGGTGGTG TTCTACCACTGAACT TERM 2069 1699331 - 1699347 + T 86 -10.9 -3.22475 | overlap 1699329 TCGAACCCGCGACCC CCACCTT GGC AAGGTGG TGTTCTACCACTGAA TERM 2070 1702628 - 1702647 + T 91 -12.2 -3.62096 | opp_overlap 1702627 1702626 TGCAGTCCTACAACC CCGAAGAG TAAA CTCTTCGG TTTGCCCTCCTGCCG TERM 2071 1704730 - 1704744 + T 95 -8.6 -4.89605 | GAGTTCTTACTCATT TCTGTC ACT GACAGA TTTATTGTTTTTTTC rumA-2 1706450 - 1705095 - | 23S rRNA (uracil-5-)-methyltransferase RumA recX 1706488 - 1707264 + | recombination regulator RecX TERM 2072 1707713 - 1707701 - g 71 -4.8 -4.61633 | ACAGATGGGGAAAAA CGTC TCTTG GACG TTGAAGAGTACGAGC SPD_1706 1707353 - 1707886 + | hypothetical protein TERM 2073 1707897 - 1707918 + T 100 -10.2 -5.20216 | opp_overlap 1707897 GGTAAAGTTGTCAAA GGTCAGGA ACAAAA TCCTGACC TTTTTTGGTAGTATA TERM 2074 1707918 - 1707897 - T 86 -10.2 -3.5936 | opp_overlap 1707897 GGTAAAGTTGTCAAA GGTCAGGA ACAAAA TCCTGACC TTTTTTGGTAGTATA TERM 2075 1707954 - 1707941 - T 74 -5.3 -4.80453 | GTAGTATAAAATAAA TTGTG TAAA CACAA AAAGGAATAAATCTA SPD_1707 1708446 - 1708240 - | hypothetical protein TERM 2076 1708481 - 1708534 + H 100 -14.1 -4.52589 | overlap 1708483 ATTAGATGTGAATTT TCGGCTCTATAATATTTGTAGTGGG TAAC CCCCCTATGGATATTATGGAGCCTA TTTTGTGTAGAAAAA TERM 2077 1708483 - 1708532 + H 100 -16.7 -3.87627 | overlap 1708481 TAGATGTGAATTTTC GGCTCTATAATATTTGTAGTGGG TAAC CCCCCTATGGATATTATGGAGCC TATTTTGTGTAGAAA TERM 2078 1709825 - 1709803 - g 93 -9.2 -5.27779 | opp_overlap 1709807 TTGAACATCAAAAAA GAAAGGACGA AAT TTGTCCTTTC TCGAGCTTAGCTGAC SPD_1708 1708606 - 1709835 + | IS1167, transposase groEL 1711556 - 1709934 - | chaperonin GroEL TERM 2079 1711032 - 1711049 + g 70 -7.7 -3.61889 | overlap 1711032 1711034 ACCACGTGACTCTTC GATGGTG ATGA CACCGTC TTTGCCAACTTTTTC groES 1711856 - 1711572 - | co-chaperonin GroES TERM 2080 1711977 - 1712007 + r 76 -9.9 -2.78813 | opp_overlap 1711977 1711983, overlap 1711976 1711983 CTGACTTTCTCAAGA TAAAAAGCCTGAG ACCAA CTCAGACTTTTTA ATTCTTAAAATGGCA TERM 2081 1712007 - 1711977 - R 85 -12.1 -3.02511 | opp_overlap 1711977 1711976 1711983, overlap 1711983 CTGACTTTCTCAAGA TAAAAAGCCTGAG ACCAA CTCAGACTTTTTA ATTCTTAAAATGGCA TERM 2082 1712001 - 1711983 - R 84 -6.7 -5.0916 | opp_overlap 1711977 1711976 1711983, overlap 1711977 TTCTCAAGATAAAAA GCCTGAG ACCAA CTCAGAC TTTTTAATTCTTAAA TERM 2083 1711983 - 1712001 + r 73 -4.5 -4.99435 | opp_overlap 1711983 1711977, overlap 1711977 1711976 TTCTCAAGATAAAAA GCCTGAG ACCAA CTCAGAC TTTTTAATTCTTAAA SPD_1711 1712407 - 1712012 - | single-strand DNA-binding protein TERM 2084 1712468 - 1712451 - R 85 -4.2 -5.73563 | opp_overlap 1712451 AGGAAATCAAAAAAA GTTACA GAAATT TGTAAC TTTTCGAGGAAATTT TERM 2085 1712470 - 1712480 + r 70 -4 -4.86216 | CAGAAATTTGTAACT TTTC GAG GAAA TTTCTTATTTTTTAT SPD_1712 1713246 - 1712485 - | oxidoreductase, short chain dehydrogenase/reductase family protein SPD_1713 1713905 - 1713279 - | hypothetical protein SPD_1714 1714238 - 1713921 - | thioredoxin family protein SPD_1715 1714534 - 1714235 - | hypothetical protein TERM 2086 1714614 - 1714592 - R 88 -7 -4.97312 | opp_overlap 1714592 1714598, overlap 1714593 AAAAGCAAGTAAAAA GCCTCTTCCT TTA AGGAAAAGGA CTTCTTATACTCAAT TERM 2087 1714613 - 1714593 - R 86 -10.5 -3.55947 | opp_overlap 1714592 1714598, overlap 1714592 AAAGCAAGTAAAAAG CCTCTTCCT TTA AGGAAAAGG ACTTCTTATACTCAA TERM 2088 1714668 - 1714688 + r 72 -8.3 -3.35996 | opp_overlap 1714654, overlap 1714661 1714669 AGCTAGCCGCAGGCT GCTCAAAGC ACT GCTTTGAGG TTGTAGATAGAACTG TERM 2089 1714669 - 1714687 + r 84 -11.8 -2.61383 | overlap 1714661 1714668 GCTAGCCGCAGGCTG CTCAAAGC ACT GCTTTGAG GTTGTAGATAGAACT TERM 2090 1714716 - 1714698 - R 76 -9.6 -2.87931 | opp_overlap 1714713 1714714, overlap 1714701 1714713 TTGAGGTTGTAGATA GAACTGAC GAA GTCAGCTC AAAACACTGTTTTGA TERM 2091 1714713 - 1714701 - R 71 -7.7 -3.58905 | overlap 1714698 AGGTTGTAGATAGAA CTGAC GAA GTCAG CTCAAAACACTGTTT TERM 2092 1714714 - 1714732 + r 78 -10.4 -2.61383 | opp_overlap 1714698 1714713, overlap 1714713 AACTGACGAAGTCAG CTCAAAAC ACT GTTTTGAG GTTGTGGATGAAGCT SPD_1716 1715062 - 1714871 - | hypothetical protein SPD_1717 1715897 - 1715223 - | hypothetical protein SPD_1718 1716349 - 1715903 - | hypothetical protein TERM 2093 1716116 - 1716082 - G 70 -9.2 -3.24709 | overlap 1716087 TAAAATAGCGAGGAA GGATAGCCTCCAACTC ATA GAGCTTGAGGCGAACC TCATAAGCTTCCTTC TERM 2094 1716111 - 1716087 - G 78 -10.7 -2.94199 | overlap 1716082 TAGCGAGGAAGGATA GCCTCCAACTC ATA GAGCTTGAGGC GAACCTCATAAGCTT SPD_1719 1716966 - 1716463 - | PAP2 family protein TERM 2095 1716777 - 1716767 - G 76 -6.8 -4.43859 | GACAAGGCCACAAAA CCTG ATG CAGG AATAAGCACATAAAC SPD_1720 1717325 - 1716963 - | hypothetical protein TERM 2096 1717383 - 1717366 - R 76 -2.7 -5.42164 | opp_overlap 1717361 1717366 TATAAATAAGAAAAA GAAGG TCGTCAAG CCTTC TTTTGATTTATTCTT SPD_1721 1718422 - 1717391 - | ABC transporter, ATP-binding protein SPD_1723 1719380 - 1719267 - | hypothetical protein TERM 2097 1719577 - 1719593 + r 88 -7.3 -4.8543 | opp_overlap 1719581 1719583, overlap 1719578 GCTCGATATCTTTAA TCAAGAC CAA GTCTTGG TTTTTCTCGCGATTA TERM 2098 1719578 - 1719592 + r 75 -8.6 -3.50535 | opp_overlap 1719581 1719583, overlap 1719577 CTCGATATCTTTAAT CAAGAC CAA GTCTTG GTTTTTCTCGCGATT TERM 2099 1719840 - 1719816 - R 100 -9.4 -5.52384 | opp_overlap 1719816 TCTTGATTAAAAAAA TCCCAAGTGA TTTTC TCACTTAGGA TCATGTTCTATAGGT SPD_1725 1720576 - 1719860 - | hypothetical protein TERM 2100 1721313 - 1721275 - R 78 -7.5 -4.20834 | overlap 1721270 TCTAAAACAAGTAAA GGATAATCAATCCCCTG TATAT CAAGGAATTGGCTACCC TTTTTACTTTTTTAC ply 1722872 - 1721457 - | pneumolysin SPD_1727 1723293 - 1722883 - | hypothetical protein SPD_1728 1723894 - 1723286 - | hypothetical protein TERM 2101 1723576 - 1723561 - G 93 -9 -5.2197 | opp_overlap 1723574 GATAAAAATCAAAAA CAGGAG CTAA CTCCTG CCAATCTGATTGGCT SPD_1729 1724365 - 1723907 - | hypothetical protein TERM 2102 1724617 - 1724590 - R 74 -5.6 -4.72986 | opp_overlap 1724577 TAGCTGTATTAAAAA CAGCTTATCAAA AAAG TCGGACAAGCTG GTAAAATCTTGGCTG TERM 2103 1724831 - 1724789 - R 100 -10.8 -4.98531 | overlap 1724823 TTGCCAAAGTAAAAA CGTTTAAAATGTTTTCAACA ACC TGTCGAAATCATCGTAAACG CTTCGGATTACGAAT TERM 2104 1725464 - 1725443 - R 74 -3 -5.23316 | overlap 1725444 TACTATACTAAAAAA CCACCTGA AACAAA TCAAGTGA CTAGAGGATAAAAAC TERM 2105 1725552 - 1725514 - R 93 -7.7 -5.46698 | gap 1 TTGAAAAGCAAAAAA CGCATAATATC-AGGTCT TGAA AAACCTTGATACTATACG TTTGATTGTGGGAAG TERM 2106 1725573 - 1725596 + r 87 -6.8 -5.42265 | overlap 1725564 TTGTGGGAAGATTGA CTTCATTTTC TCCT GAAATTGAAG TTTTTTCTAGTTTCC SPD_1731 1725914 - 1725654 - | hypothetical protein TERM 2107 1725995 - 1726013 + r 78 -10.4 -2.61264 | overlap 1725994 GCTAGTTGCAGGCTG CTCAAAAC ACT GTTTTGAG GTTGTAGATGGAAGC SPD_1732 1726524 - 1725973 - | hypothetical protein SPD_1733 1726711 - 1726514 - | hypothetical protein SPD_1734 1727509 - 1726715 - | hypothetical protein SPD_1735 1728342 - 1727917 - | hypothetical protein SPD_1736 1728830 - 1728471 - | hypothetical protein TERM 2108 1729322 - 1729282 - R 84 -11.6 -3.02121 | opp_overlap 1729294 1729294, overlap 1729277 1729294 AAAAAGAATAGCACA CTTTTGTCATAATTTTTT AAATA AAAAAATTATGACAAAAC AAGGAAGCAATTTAT TERM 2109 1729572 - 1729534 - R 100 -9.9 -4.77567 | gap 1, opp_overlap 1729534 ATCTCCACAAGAAAA CGCATACTATTAAG-CTT TTTC AAGACCTAATAATATGCG CTGTTCTGATTTGAA lytA 1730557 - 1729601 - | autolysin/N-acetylmuramoyl-L-alanine amidase dinF 1732303 - 1730933 - | MATE efflux family protein DinF TERM 2110 1731679 - 1731668 - G 70 -3.6 -4.91285 | overlap 1731669 ACGAATATAATAAAA GCAG AGAA CCGC TGATAAACCTTGCGA TERM 2111 1732600 - 1732581 - R 73 -4.2 -4.92239 | opp_overlap 1732581, overlap 1732584 TCAAAAATCGAAAAA GTAGCGGA TTTC TCCACTGC TTTAACAGCTTATTC recA 1733776 - 1732610 - | recombinase A cinA 1735087 - 1733831 - | competence damage-inducible protein A TERM 2112 1735146 - 1735127 - R 95 -8.6 -5.00884 | opp_overlap 1735124 1735127 ATTTTTTTGAAAAAA TCGCAGGA ATTT TCCTACGA TTGATTTTTTTATTT TERM 2113 1735127 - 1735146 + r 71 -6.4 -4.14454 | opp_overlap 1735127, overlap 1735124 ATTTTTTTGAAAAAA TCGCAGGA ATTT TCCTACGA TTGATTTTTTTATTT SPD_1741 1736188 - 1735172 - | transcriptional regulator, putative TERM 2114 1735418 - 1735443 + g 70 -9.1 -3.24924 | overlap 1735416 GTTAGGGATACTTTT TGCAGACAAAT CAAT ATTGGTCTGCA TATTGTCACTCAAAG SPD_1742 1736714 - 1736196 - | acetyltransferase, GNAT family protein SPD_1743 1737147 - 1736704 - | hypothetical protein SPD_1744 1737853 - 1737233 - | hypothetical protein TERM 2115 1738192 - 1738158 - R 83 -11.7 -2.90061 | opp_overlap 1738155 1738154 1738152, overlap 1738161 AGAGTCACATAATTA TAAGGCTGATAGT ATTAATCTA ACTATCAGCCTTA CAGGTTATTTAACGT TERM 2116 1738189 - 1738161 - R 77 -9 -3.59023 | opp_overlap 1738155 1738154 1738152, overlap 1738158 GTCACATAATTATAA GGCTGATAGT ATTAATCTA ACTATCAGCC TTACAGGTTATTTAA SPD_1745 1739099 - 1738236 - | transcriptional regulator PlcR, putative TERM 2117 1739042 - 1739058 + g 76 -7.3 -4.17301 | overlap 1739049 CTTCTGCAAGAGTTT GTTGGGA GAG TCTCAAC TCTTTTCTTTTCAAT TERM 2118 1739049 - 1739060 + g 76 -4.4 -5.11836 | overlap 1739042 AAGAGTTTGTTGGGA GAGT CTCA ACTC TTTTCTTTTCAATCT TERM 2119 1739285 - 1739274 - H 71 -3 -5.10004 | AAAAACAAGGAAAAA GAAA GGGG TTTC ATTGCATGAGAAAAA SPD_1746 1739291 - 1739461 + | hypothetical protein SPD_1747 1739564 - 1739788 + | hypothetical protein SPD_1748 1739795 - 1739983 + | hypothetical protein TERM 2120 1739997 - 1739981 - f 78 -2.4 -5.68489 | opp_overlap 1739993, overlap 1739993 GACAACAAGAAAAAA TAAAAT ATTCA ATTTTA AAAATAAAAGTTGCT TERM 2121 1740022 - 1740052 + F 100 -7.6 -6.34424 | GTTGCTCTTTATTTT CCTCTCTCGTAACT AAT AATTTTGAGAGAGG TTTTTTTTTTAAACA TERM 2122 1741123 - 1741133 + G 70 -5.4 -4.34932 | ATTATAATTTTGGTG TGCT TTT AGCA TTTATATATTTATTT TERM 2123 1741838 - 1741852 + G 79 -5.8 -4.90778 | CAATGAAATCTACGA TGATTT TGG AAATCA TTTTATTTCCCTACA SPD_1749 1740099 - 1743089 + | bacteriocin formation protein, putative TERM 2124 1743305 - 1743287 - f 76 -7.6 -4.04206 | CTACTGTTATAGAAA TGATTTTA AAC TAAAATCA AAATTACTCCAAAAA TERM 2125 1743749 - 1743738 - g 78 -3 -5.36441 | TGTGGACACAAAAAA CTTT ATTG AAAG GATTGGGGGGTGGAG wrbA 1743439 - 1744143 + | hypothetical protein TERM 2126 1744540 - 1744550 + G 71 -4 -4.98255 | overlap 1744534 AGAATTTTTTATTTT GAAT ATA ATTC TTTTTCTAGTTACGG SPD_1751 1744124 - 1745053 + | hypothetical protein TERM 2127 1745296 - 1745309 + G 70 -3.1 -5.00467 | CCACTCATTTGCTTC TGGGA GAGT TCTCA TTTTATTATTCTTGA SPD_1752 1745050 - 1747158 + | toxin secretion ABC transporter, ATP-binding/permease protein TERM 2128 1748582 - 1748572 - g 88 -4 -5.75342 | TGTTTGTAAAAAAAA TTCT GGA AGAA ACATTACCAGTAAAA SPD_1753 1747182 - 1748921 + | serine protease, subtilase family protein SPD_1754 1748972 - 1749739 + | hypothetical protein SPD_1755 1749741 - 1750373 + | ABC transporter, ATP-binding protein SPD_1756 1750531 - 1750692 + | hypothetical protein TERM 2129 1751133 - 1751149 + T 100 -13.7 -6.02914 | ATAACCTTCGACGCA CACCCGC ATA GCGGGTG TTTTTTTTGTCTCGC TERM 2130 1751245 - 1751208 - T 76 -3.6 -5.28481 | opp_overlap 1751240 CACTTAATCAAAAAA CGCACCATATCAAA AACTAAAAAG TTTGATATCATGCG TCATGTCTTAAACTA ndk 1751732 - 1751319 - | nucleoside diphosphate kinase TERM 2131 1751851 - 1751795 - R 100 -10.4 -4.09459 | gap 1, opp_overlap 1751795 1751805, overlap 1751805 1751812 GGAAAAATGGAGAAA GTTTTCAGAAGAGAGAATGAGAGAACC CTCG GGTTCTCTCATTCTCTCTTATTCTA-C TGTTTCTTCCACAGT TERM 2132 1751805 - 1751842 + r 100 -24.5 -3.90897 | opp_overlap 1751805 1751795 1751812, overlap 1751795 AGAAAGTTTTCAGAA GAGAGAATGAGAGAACC CTCG GGTTCTCTCATTCTCTC TTATTCTACTGTTTC TERM 2133 1751842 - 1751805 - R 100 -24.5 -3.32562 | opp_overlap 1751795 1751805, overlap 1751795 1751812 AGAAAGTTTTCAGAA GAGAGAATGAGAGAACC CTCG GGTTCTCTCATTCTCTC TTATTCTACTGTTTC TERM 2134 1751835 - 1751812 - R 100 -14 -3.72788 | opp_overlap 1751805 1751795, overlap 1751805 1751795 TTTCAGAAGAGAGAA TGAGAGAACC CTCG GGTTCTCTCA TTCTCTCTTATTCTA rpoC 1755520 - 1751843 - | DNA-directed RNA polymerase subunit beta' rpoB 1759164 - 1755553 - | DNA-directed RNA polymerase subunit beta TERM 2135 1759689 - 1759704 + r 71 -3.2 -5.093 | opp_overlap 1759689 TCAAATGAACAGAAA GCCC AATTTGAA GGGC TTTTCTTATTTTCCC TERM 2136 1759840 - 1759815 - R 77 -4.8 -5.1848 | gap 1, overlap 1759816 1759817 AATCAATTGAAAAAA GCTTC-GTCAC GCCTG GTGACAAAAGC CTCTAGTTTATTCTG SPD_1761 1761179 - 1759848 - | CBS domain-containing protein TERM 2137 1761393 - 1761367 - R 71 -5.2 -4.50218 | overlap 1761364 AACTAGTAAAAAGAA CTCCTACATC CATAAGT GACATAGGAG TTTAGGCTTATCTTT SPD_1762 1762232 - 1761408 - | DNA-entry nuclease TERM 2138 1762256 - 1762271 + r 80 -10.4 -3.00138 | opp_overlap 1762256, overlap 1762253 TTATCTTTAGAAAAA GGCTGG TTCT CCAGCC TAATTTCCTGTAAAT TERM 2139 1762271 - 1762256 - R 100 -10.4 -4.84359 | opp_overlap 1762253 1762256 TTATCTTTAGAAAAA GGCTGG TTCT CCAGCC TAATTTCCTGTAAAT SPD_1763 1762477 - 1762271 - | hypothetical protein murA-2 1763735 - 1762452 - | UDP-N-acetylglucosamine 1-carboxyvinyltransferase SPD_1765 1765084 - 1764047 - | hypothetical protein TERM 2140 1764232 - 1764222 - G 71 -6.8 -4.08958 | GGAGCAAAGAAAATA GCAG CAC CTGC CCTAGCCGAAGCTAC coaD 1765556 - 1765068 - | phosphopantetheine adenylyltransferase SPD_1767 1766085 - 1765546 - | type II DNA modification methyltransferase, putative TERM 2141 1766150 - 1766123 - RH 100 -11.4 -4.62163 | opp_overlap 1766128 1766129, overlap 1766128 AGACAAAAAGAGAAA GAAAACCGAACC TTGC GGTTCGATTCTC TACAAAATATTTTCG TERM 2142 1766145 - 1766128 - RH 88 -7.7 -5.15682 | opp_overlap 1766128 1766129, overlap 1766123 AAAAGAGAAAGAAAA CCGAACC TTGC GGTTCGA TTCTCTACAAAATAT asnA 1767142 - 1766150 - | asparagine synthetase AsnA TERM 2143 1767240 - 1767219 - gR 100 -5.2 -5.91981 | opp_overlap 1767219 AAAATTTAAAAAAAA TCAGTGTC ACTCAA AACACTGA TTTCATAGACCTTTT SPD_1770 1767122 - 1767280 + | hypothetical protein SPD_1769 1767961 - 1767254 - | hypothetical protein SPD_1771 1768733 - 1767993 - | SpoU rRNA methylase family protein SPD_1772 1768782 - 1769045 + | acylphosphatase, putative TERM 2144 1769510 - 1769486 - g 79 -9.4 -3.68222 | CTCGAAGCCCAACAA GCTCTCTTTG CTGCT CAAAAAGAGC ACGGTATCAGCATGT TERM 2145 1770044 - 1770019 - g 87 -4.8 -5.41787 | gap 1 GAAAAAACACAAAAA TCGCAACGCTG GAAAA CAACGTT-CGA GATAAGAAGAAAAAG SPD_1773 1769123 - 1770049 + | OxaA-like protein precursor TERM 2146 1770080 - 1770059 - T 79 -4.4 -5.35721 | opp_overlap 1770059, overlap 1770061 AGATAAGAAGAAAAA GGCTTAGC TGATTT GCTAAGTC TTTTTGCAAGTCAAA TERM 2147 1770059 - 1770080 + T 76 -6.6 -4.59773 | opp_overlap 1770059 1770061 AGATAAGAAGAAAAA GGCTTAGC TGATTT GCTAAGTC TTTTTGCAAGTCAAA TERM 2148 1770094 - 1770119 + T 74 -6.1 -4.56358 | opp_overlap 1770097, overlap 1770097 TCTTTTTGCAAGTCA AAAGCCCGATG TTTC CATCAGGCTTC TTTTCTATCCATGTA TERM 2149 1770097 - 1770116 + T 81 -7.8 -4.38744 | opp_overlap 1770097, overlap 1770094 TTTTGCAAGTCAAAA GCCCGATG TTTC CATCAGGC TTCTTTTCTATCCAT TERM 2150 1770116 - 1770097 - T 100 -10 -4.27316 | opp_overlap 1770097 1770094 TTTTGCAAGTCAAAA GCCCGATG TTTC CATCAGGC TTCTTTTCTATCCAT pflA 1770918 - 1770124 - | pyruvate formate-lyase activating enzyme lysA 1772294 - 1771044 - | diaminopimelate decarboxylase TERM 2151 1772346 - 1772325 - R 74 -6.5 -4.41348 | opp_overlap 1772325 CTGTTTGCAAAGAAA GGCTGGGAC AATC GTTCCAACC TTTAGTTCTATCTCT purR 1773188 - 1772361 - | purine operon repressor TERM 2152 1773440 - 1773413 - R 78 -2.1 -5.72616 | overlap 1773414 ATTTACATAAAAAAA CGAACATTCTT ATCCTA AAAAATGCTCA TTTTTCTTAAATTAT cbf1 1774408 - 1773455 - | cmp-binding-factor 1 SPD_1778 1775642 - 1774386 - | hypothetical protein SPD_1779 1776306 - 1775644 - | hypothetical protein rpe 1776925 - 1776269 - | ribulose-phosphate 3-epimerase rsgA 1777814 - 1776936 - | ribosome-associated GTPase ksgA 1778688 - 1777816 - | dimethyladenosine transferase TERM 2153 1778794 - 1778769 - R 100 -9.9 -5.2422 | opp_overlap 1778769 AATCATACCAAAAAA CTATCTTTCCT CATG AAGAAAGATAG TCTTGGAAATCTTTA SPD_1783 1779127 - 1778819 - | hypothetical protein SPD_1784 1779761 - 1779120 - | ABC transporter, ATP-binding protein SPD_1785 1781793 - 1779763 - | immunity protein, putative TERM 2154 1781990 - 1782016 + r 100 -12.5 -4.25104 | opp_overlap 1781990 TTATATCTAAAAAAA CAGTTCTAAAG ACGAA CTTTAGAACTG TTTTGATACGAGGAC TERM 2155 1782016 - 1781990 - R 100 -12.5 -5.50499 | opp_overlap 1781990 TTATATCTAAAAAAA CAGTTCTAAAG ACGAA CTTTAGAACTG TTTTGATACGAGGAC SPD_1786 1782961 - 1782062 - | transcriptional regulator PlcR, putative SPD_1787 1783593 - 1783033 - | primase-related protein TERM 2156 1783128 - 1783146 + g 70 -9.6 -2.59565 | opp_overlap 1783123, overlap 1783127 1783126 CGTTAGAATAGCCGA TTCGGAGA GTC TCTCCGAG ATATTCTCTACGCTT SPD_1788 1784366 - 1783593 - | hydrolase, TatD family protein TERM 2157 1784409 - 1784444 + r 84 -11.2 -3.08679 | gap 1, opp_overlap 1784409, overlap 1784411 1784411 1784441 1784442 TATTATACCAAAAAA GAGGAGGGG-CACCTAA TTT TTCGGTTTCCCCTCCTC TCTTCAATAGAGAGC TERM 2158 1784444 - 1784409 - R 100 -11.2 -5.23316 | gap 1, opp_overlap 1784409 1784411 1784411 1784441 1784442 TATTATACCAAAAAA GAGGAGGGG-CACCTAA TTT TTCGGTTTCCCCTCCTC TCTTCAATAGAGAGC SPD_1789 1785337 - 1784672 - | cell wall surface anchor family protein TERM 2159 1785577 - 1785554 - R 82 -3.2 -5.69262 | opp_overlap 1785554 TTACAAAAATAAAAA TCAGTAGA CTCGAGTT CCTACTGA TTTTTGATAGAATTC rpmH 1785734 - 1785600 - | 50S ribosomal protein L34 SPD_1791 1787093 - 1785879 - | aminotransferase AlaT TERM 2160 1787204 - 1787193 - R 79 -4.4 -5.24796 | CGTATAGAAGAAAAA CCTT GCTA AAGG CGAGGTTAAGAACGT SPD_1792 1787542 - 1787249 - | hypothetical protein TERM 2161 1787426 - 1787411 - G 76 -3.3 -5.1971 | ATGAAAAACTAAAAA TCCAA TAAAAC TTGGA TAAAGAAGCGGTACC SPD_1793 1787704 - 1788156 + | universal stress protein family protein TERM 2162 1788188 - 1788164 - T 78 -7.9 -4.1021 | opp_overlap 1788169, overlap 1788169 CCTTATAATCACAAA GAAAAGGAGCC CCT AGCTCCTTTTT GTTTACGATTTATTT TERM 2163 1788183 - 1788169 - T 88 -7.8 -5.04733 | opp_overlap 1788169, overlap 1788164 TAATCACAAAGAAAA GGAGCC CCT AGCTCC TTTTTGTTTACGATT TERM 2164 1788169 - 1788183 + T 89 -7.1 -5.29846 | opp_overlap 1788169 1788164 TAATCACAAAGAAAA GGAGC CCCTA GCTCC TTTTTGTTTACGATT SPD_1794 1789579 - 1788191 - | Cof family protein TERM 2165 1789450 - 1789440 - G 84 -2.4 -5.7946 | TCCTTAACAAAAAAA GGTC CTC GCCC TGTCGCTACGCCAAC TERM 2166 1789774 - 1789788 + G 81 -5.7 -5.09426 | opp_overlap 1789769 1789774, overlap 1789769 CTTGAAGGAATCCAA GTCCA CGCCT TGGAC TTTTTTAACCTTCCA SPD_1796 1789645 - 1790607 + | L-asparaginase, putative SPD_1795 1790732 - 1790604 - | hypothetical protein TERM 2167 1790665 - 1790677 + g 73 -7.7 -3.83205 | CCGTATGTATGGTTA CTGAC TTC GTCAG TTTCATCTACAACCT TERM 2168 1790710 - 1790722 + g 70 -7.7 -3.72695 | AAAACATGTTTTGAG CTGAC TTC GTCAG TTTCATCCACAACCT TERM 2169 1790857 - 1790823 - R 72 -9.5 -2.73875 | opp_overlap 1790828, overlap 1790828 TCTTGTTTAAGAGCA CAAAATCAGGAAATC TTCTC GATTCCCTGATTTTT TCTATTTACGTTTTC TERM 2170 1790828 - 1790852 + r 93 -7.2 -5.56264 | opp_overlap 1790828 1790823 TTTAAGAGCACAAAA TCAGGAAATC TTCTC GATTCCCTGA TTTTTTCTATTTACG TERM 2171 1790852 - 1790828 - R 93 -9.4 -4.55023 | opp_overlap 1790828, overlap 1790823 TTTAAGAGCACAAAA TCAGGAAATC TTCTC GATTCCCTGA TTTTTTCTATTTACG ccpA 1791869 - 1790859 - | catabolite control protein A TERM 2172 1791669 - 1791681 + g 86 -7.7 -4.8622 | TGGAATCACGACACC GACAG TGG CTGTC TTTTTACTTGCAAGA TERM 2173 1792011 - 1792022 + r 76 -4.4 -5.055 | opp_overlap 1792011 ATCACTAATTGTAAA CACT TTCA AGTG TTTTTTGAAGATTGA TERM 2174 1792057 - 1792047 - R 73 -4 -5.09895 | GATTGATTGAAAAAA TTTC ATA GAAA ACCTAGGTTTAGCTC TERM 2175 1792119 - 1792101 - R 76 -3.8 -5.35815 | TAGACTAAACAAAAA GGAGGA AACTAAG CCCTCC TAAAGTTATAGTAAA SPD_1798 1792893 - 1792294 - | DNA-binding response regulator SPD_1799 1793992 - 1792895 - | sensor histidine kinase, putative SPD_1800 1794729 - 1793992 - | hypothetical protein TERM 2176 1794653 - 1794632 - G 73 -2.3 -5.27709 | gap 1, overlap 1794634 1794639 1794640 CCAGAAAAAAATAAA TAGAAA-GCC GTC GGCATCCCTA CCGACAATAGATAAT SPD_1801 1795615 - 1794731 - | ABC transporter, ATP-binding protein SPD_1802 1795796 - 1795602 - | hypothetical protein SPD_1803 1795972 - 1795793 - | hypothetical protein TERM 2177 1796076 - 1796061 - R 74 -6.2 -4.46212 | TCTGTCACTAGAAAA TATGAC AAAT GTCATA AAAATTCTGTTCAAA TERM 2178 1796405 - 1796389 - R 71 -5.3 -4.56597 | TTGCTTTCTTAAAAA TTTATAA GAG TTATAAA ATCTGTTAAATTTCA TERM 2179 1796530 - 1796508 - R 100 -9.2 -5.46698 | opp_overlap 1796508 CTGAAAATCAAAAAA GAGAGAACCA AAC TGATTCCCTC TTAATGTATATAATA TERM 2180 1796880 - 1796900 + r 79 -9.7 -3.31263 | overlap 1796882 ATTCGAACCCGCGAC CCCCACCTT GGC AAGGTGGTG TTCTACCACTGAACT TERM 2181 1796882 - 1796898 + r 86 -10.9 -3.22475 | overlap 1796880 TCGAACCCGCGACCC CCACCTT GGC AAGGTGG TGTTCTACCACTGAA TERM 2182 1800179 - 1800198 + r 91 -12.2 -3.62096 | opp_overlap 1800178 1800177 TGCAGTCCTACAACC CCGAAGAG TAAA CTCTTCGG TTTGCCCTCCTGCCG TERM 2183 1802281 - 1802295 + r 95 -8.6 -4.89605 | GAGTTCTTACTCATT TCTGTC ACT GACAGA TTTATTGTTTTTTTC TERM 2184 1802466 - 1802477 + r 77 -3 -5.52986 | TTTGAAGATTTTTAA GTTT TTTT AAAC TTTTTTTCATCAAGT comX2 1803157 - 1802678 - | transcriptional regulator ComX2 TERM 2185 1803272 - 1803255 - R 100 -11.3 -5.28826 | opp_overlap 1803268 AAACTGCACAAAAAA GAGAGGC TCCA GCCTCTC TCAGGGTTATAATTC nusG 1803815 - 1803279 - | transcription antitermination protein NusG TERM 2186 1803792 - 1803778 - G 71 -7.2 -3.91357 | TCATAACCAGAATAA GTTTGT AAA ACAAAC CATCCTTTATCAAAA secE 1804046 - 1803870 - | preprotein translocase subunit SecE TERM 2187 1804179 - 1804193 + r 82 -4.2 -5.52986 | overlap 1804180 CGAACCACAAACCGC ACAAGC TAG GCTTGC TTTTTTTAGTGCCAT TERM 2188 1804180 - 1804192 + r 76 -7.7 -3.90707 | overlap 1804179 GAACCACAAACCGCA CAAGC TAG GCTTG CTTTTTTTAGTGCCA pbp2A 1806456 - 1804261 - | penicillin-binding protein 2A TERM 2189 1806435 - 1806420 - G 77 -6.2 -4.56597 | opp_overlap 1806402 1806405 TTTCTTTTTTAAAAA GAGAAA GAAA TTTCTC AAATAATTTATCTAA SPD_1822 1806543 - 1807418 + | ribosomal large subunit pseudouridine synthase, RluD subfamily protein TERM 2190 1807433 - 1807409 - T 86 -5.8 -5.43514 | opp_overlap 1807412, overlap 1807412 AAAAGAATTAAAAAA GAATGGATGA TCGTG TCATCCATTT TTCCATATAAAAAAG TERM 2191 1807430 - 1807412 - T 83 -7.5 -4.73828 | opp_overlap 1807412, overlap 1807409 AGAATTAAAAAAGAA TGGATGA TCGTG TCATCCA TTTTTCCATATAAAA TERM 2192 1807412 - 1807430 + T 86 -8.2 -4.70659 | opp_overlap 1807412 1807409 AGAATTAAAAAAGAA TGGATGAT CGT GTCATCCA TTTTTCCATATAAAA TERM 2193 1807467 - 1807448 - T 85 -6.4 -5.36441 | opp_overlap 1807448, overlap 1807457 TTTCCATATAAAAAA GCAAGACC ACAA AGCCTTGC TTTCTATCAACTCAA gap 1808493 - 1807486 - | glyceraldehyde-3-phosphate dehydrogenase TERM 2194 1808157 - 1808169 + g 82 -7.7 -4.64598 | CAACTTTTTTAGCTC CACCT TTA AGGTG TTTTTCAGCTGCTTC SPD_1824 1809632 - 1808670 - | hypothetical protein TERM 2195 1808884 - 1808874 - G 70 -3.2 -4.8622 | TTGTGCAACCAAAAA TGCC AGC AGCA AGGCGATGCCTACAA TERM 2196 1809722 - 1809762 + r 77 -9.3 -3.30658 | gap 1, opp_overlap 1809722 1809732, overlap 1809732 AGCAGGATAAAAAAG CCTCGTAAAAGGTATTGC AACTTG GTAATACCTTTT-TGAGG TGCTTTTTGATATGA TERM 2197 1809732 - 1809753 + r 74 -5.2 -4.652 | opp_overlap 1809732 1809722, overlap 1809722 AAAAGCCTCGTAAAA GGTATTGC AACTTG GTAATACC TTTTTGAGGTGCTTT nadC 1811528 - 1810656 - | nicotinate-nucleotide pyrophosphorylase TERM 2198 1811641 - 1811662 + H 100 -8.9 -6.06529 | opp_overlap 1811635 1811643 1811646 TCTAACAAGTGTCAA TACAATTGT CAAG ACAATTGTA TTTTTTTTGTGTATA SPD_1827 1811765 - 1813075 + | hypothetical protein TERM 2199 1813326 - 1813281 - T 100 -12.8 -4.93316 | gap 1, opp_overlap 1813291 CAAGAATATGAAAAA TATGAAGAAAGTGCGTTCCCA GGACA TGGGAGCGCAC-TTCGTCATA CTCAATTTGAGATAT TERM 2200 1813291 - 1813317 + T 95 -14.5 -3.23395 | opp_overlap 1813281 AAAAATATGAAGAAA GTGCGTTCCCA GGACA TGGGAGCGCAC TTCGTCATACTCAAT SPD_1828 1813572 - 1813441 - | hypothetical protein TERM 2201 1813678 - 1813658 - R 88 -7.1 -4.86621 | overlap 1813666 ATTCGTAATGAAAAA TAAAAAAAT AAA ATTTTTTTA AATGATTATGATTCA TERM 2202 1813678 - 1813666 - R 95 -3.5 -6.20267 | overlap 1813658 TGAAAAATAAAAAAA TAAAA TTT TTTTA AATGATTATGATTCA SPD_1829 1814823 - 1814095 - | transcriptional regulator, GntR family protein SPD_1830 1814981 - 1816390 + | glycosyl hydrolase, family protein 1 SPD_1831 1816408 - 1817703 + | PTS system, IIC component SPD_1832 1817708 - 1818016 + | PTS system, IIB component SPD_1833 1818013 - 1818321 + | PTS system, IIA component TERM 2203 1818338 - 1818319 - T 72 -5 -4.72007 | opp_overlap 1818319, overlap 1818321 CTCTATCAAAATAAA TAGGAACA CTGT CGTTCCCA TCTGTCTTTATTAAT TERM 2204 1818402 - 1818434 + T 100 -10.7 -5.16132 | opp_overlap 1818402 1818393 ACAAAATGATTGAAA GGATTGGATCCTG CATTACA CAAGATCCAATCC TTTTCTTTTACTCTA TERM 2205 1818434 - 1818402 - T 100 -14.3 -3.77014 | opp_overlap 1818402, overlap 1818393 ACAAAATGATTGAAA GGATTGGATCCTGCA TTA CACAAGATCCAATCC TTTTCTTTTACTCTA TERM 2206 1819118 - 1819156 + T 100 -16.3 -4.46212 | gap 1, opp_overlap 1819118 TCAATATCATAAAAA GGCATCCTATCAGGTGTT CAAA AAC-CTTGATAGGATGCC TTTTATCATAGAAAA TERM 2207 1819156 - 1819118 - T 100 -14.1 -4.98436 | gap 1, opp_overlap 1819118 TCAATATCATAAAAA GGCATCCTATC-AGGTGT TCAA AAACCTTGATAGGATGCC TTTTATCATAGAAAA TERM 2208 1819188 - 1819198 + T 79 -5.4 -5.1485 | GTACTGGATCTTTCC CTCA AAT TGAG TTTTTGTCTTGCTTC SPD_1834 1821880 - 1819229 - | bifunctional acetaldehyde-CoA/alcohol dehydrogenase TERM 2209 1821004 - 1821016 + g 81 -2.7 -5.63517 | opp_overlap 1820996, overlap 1820996 AGCAGAACTCTTCAA GAAGA GCT TTTTC TTTTTTGTTTACAAA TERM 2210 1822063 - 1822073 + r 80 -2.6 -5.63517 | overlap 1822056 GAAGTTTGTGAAATT TATT TCA AATA TTTTTTATTTCACAA SPD_1835 1822220 - 1822083 - | hypothetical protein TERM 2211 1822155 - 1822182 + gr 81 -5.6 -5.06414 | opp_overlap 1822158 1822160, overlap 1822159 1822160 ACCTTGTAATTCTAA TAATACCTCCTT TGAT AAGGAGGCTTTA TTTTTGTTGAAAAAC TERM 2212 1822159 - 1822178 + gr 84 -6.4 -5.05606 | opp_overlap 1822158 1822160, overlap 1822155 1822160 TGTAATTCTAATAAT ACCTCCTT TGAT AAGGAGGC TTTATTTTTGTTGAA TERM 2213 1822160 - 1822177 + gr 82 -9.9 -3.61737 | opp_overlap 1822160 1822158, overlap 1822159 1822155 GTAATTCTAATAATA CCTCCTT TGAT AAGGAGG CTTTATTTTTGTTGA TERM 2214 1822177 - 1822160 - GR 81 -9.9 -3.42069 | opp_overlap 1822159 1822155 1822160, overlap 1822158 GTAATTCTAATAATA CCTCCTT TGAT AAGGAGG CTTTATTTTTGTTGA SPD_1836 1822590 - 1822180 - | hypothetical protein SPD_1837 1823020 - 1822592 - | phosphotyrosine protein phosphatase TERM 2215 1823064 - 1823047 - R 73 -4.1 -4.96848 | opp_overlap 1823047 TCTTTTATAGAAAAA CGGGA GTTCGTGA TCCCG TCTTATTTTTCAATT yajC 1823366 - 1823067 - | preprotein translocase subunit YajC TERM 2216 1823473 - 1823456 - R 79 -5.5 -5.06414 | opp_overlap 1823457 1823469, overlap 1823457 TTCTGGTAAGAAAAA CCAGAGC TTAC GCCCTGA TTTTTAGGATTATTT tkt 1825459 - 1823483 - | transketolase TERM 2217 1823670 - 1823684 + g 70 -8.6 -3.33671 | CGGCGGACTGCATTT GGAAGA ATC TCTTCC TTGTAAGCTGCATCT TERM 2218 1825551 - 1825524 - R 78 -7.2 -4.37502 | overlap 1825518 ACTATTATATGAAAA TTATCCGTAT CATGCAAC ATACGGATAA CCTCCAAAGAATATT SPD_1840 1826664 - 1825573 - | putative L-ascorbate 6-phosphate lactonase TERM 2219 1826769 - 1826733 - R 76 -3.8 -5.36314 | gap 1, opp_overlap 1826745 1826756, overlap 1826735 1826745 CAAAACACTAAAAAA GACCAA-GAAAAACACA GGTT TGTGTTCATCATTGGAC TGTCCTTCAAATATC TERM 2220 1826756 - 1826745 - R 76 -4.4 -5.20606 | opp_overlap 1826745, overlap 1826735 1826733 AAAGACCAAGAAAAA CACA GGTT TGTG TTCATCATTGGACTG SPD_1841 1828449 - 1826776 - | transcriptional regulator, BglG family protein TERM 2221 1827624 - 1827609 - G 71 -4.8 -4.55295 | GTCCTGACAAAGAAA TTTCAA ACTT TTGAAA CAACCGTTCTCCTAA araD 1829332 - 1828628 - | L-ribulose-5-phosphate 4-epimerase SPD_1843 1830197 - 1829334 - | putative L-xylulose 5-phosphate 3-epimerase TERM 2222 1829675 - 1829687 + g 70 -3.4 -4.96848 | ATACAAAGAGGAAGG GAGA GTCAA TCTC TTTTTCTATAGCCAA ulaD 1830866 - 1830201 - | 3-keto-L-gulonate-6-phosphate decarboxylase SPD_1845 1831368 - 1830883 - | PTS system, IIA component TERM 2223 1831437 - 1831389 - R 95 -13.3 -3.64703 | gap 1 CCTCCTTTATTTAAA GAGGGAGAAGGACAGAAAC-GA TAACTC TCAGTTTCTGTCCAGCCCCCTC CAACCTTTTACTGTA SPD_1846 1831726 - 1831445 - | PTS system, IIB component SPD_1847 1833206 - 1831749 - | ascorbate-specific PTS system enzyme IIC TERM 2224 1833306 - 1833270 - R 76 -3.8 -5.29846 | gap 1, opp_overlap 1833293, overlap 1833272 AAGCGCAAACAAAAA GACCAAGAATTACACAG CGGA CTGT-TCACTCTTGGAC TGTATGATTTATGAT SPD_1848 1833960 - 1833337 - | hypothetical protein TERM 2225 1834004 - 1833990 - R 82 -5.7 -5.2189 | opp_overlap 1833985 1833990 CTAACTAGCAAAAAA TCAGG ATAAA CCTGA TTTTACTTATTCTGT TERM 2226 1833990 - 1834004 + r 71 -5.7 -4.60317 | opp_overlap 1833990, overlap 1833985 CTAACTAGCAAAAAA TCAGG ATAAA CCTGA TTTTACTTATTCTGT SPD_1849 1834997 - 1834011 - | protein jag (SpoIIIJ-associated protein ), putative TERM 2227 1834763 - 1834774 + g 78 -3 -5.40072 | TCTTCACAGGCTCGT TCAA ATCA TTGA TTTTTTTCGGAACGC SPD_1850 1835846 - 1835016 - | SpoIIIJ family protein TERM 2228 1835705 - 1835691 - GR 72 -3.5 -5.05228 | ATCAAACGATAAAAA GCGAA TGATT TCCGC AAAGAAGTAAACCAA TERM 2229 1835750 - 1835734 - GR 82 -7.9 -4.63184 | opp_overlap 1835735 1835737, overlap 1835735 AATTTACTCCAAAAA TCAGCCG ATT CGGCTGT AATATCGCTAGTTAC TERM 2230 1835735 - 1835749 + gr 83 -11.4 -2.6574 | opp_overlap 1835734 1835735, overlap 1835737 ATTTACTCCAAAAAT CAGCCG ATT CGGCTG TAATATCGCTAGTTA TERM 2231 1835749 - 1835735 - GR 89 -11.4 -3.37188 | opp_overlap 1835735 1835737, overlap 1835734 ATTTACTCCAAAAAT CAGCCG ATT CGGCTG TAATATCGCTAGTTA rnpA 1836186 - 1835815 - | ribonuclease P SPD_1852 1836334 - 1836203 - | hypothetical protein TERM 2232 1836307 - 1836279 - G 85 -7.5 -4.91511 | ATTTCATCAGAAAAA GAAGCTGGAAAAA TAA CTTTCCCAACTCC TTGTATTGAATATTT ackA 1837525 - 1836335 - | acetate kinase SPD_1854 1838529 - 1837576 - | hypothetical protein TERM 2233 1837648 - 1837634 - G 73 -8.6 -3.74158 | overlap 1837632 AATTTCATTAAAACA CTTGCA TCT TGCAAG CTAGCAAGTGGATAA TERM 2234 1838601 - 1838579 - R 88 -7.1 -4.9725 | gap 1, opp_overlap 1838579 ATCCTTATAGAAAAA TCACTC-CCT GACT AGGCGAGTGA TTTTTGGGCTACTAT TERM 2235 1838579 - 1838601 + r 80 -7.1 -4.63928 | gap 1, opp_overlap 1838579 ATCCTTATAGAAAAA TCACTC-CCT GACT AGGCGAGTGA TTTTTGGGCTACTAT SPD_1855 1838970 - 1838590 - | hypothetical protein SPD_1856 1839184 - 1839002 - | hypothetical protein SPD_1857 1839734 - 1839321 - | hypothetical protein TERM 2236 1839565 - 1839596 + g 78 -3 -5.47159 | TGCTCAACCTTATCT TTGGTTCGTTTAGC CATA GCAAAAGCAACCAA TTTTTCTTTATTCAA SPD_1858 1840173 - 1839712 - | hypothetical protein SPD_1859 1840396 - 1840136 - | hypothetical protein clgD 1840805 - 1840401 - | competence protein CglD cglC 1841124 - 1840798 - | competence protein CglC cglB 1841998 - 1841126 - | competence protein CglB TERM 2237 1842032 - 1842020 - R 83 -7.7 -4.66163 | overlap 1842006 1842027 ACTCCTATCTAAAAA GGAGA TAG TCTCC ACCAGATGAAAACCG TERM 2238 1842090 - 1842103 + r 79 -5.3 -5.1287 | ATGATATTTTTTTGC TTAGC TGTA GCTAA TTTTTTCCGTCTCAG cglA 1843031 - 1842090 - | competence protein CglA TERM 2239 1842700 - 1842688 - G 70 -3.3 -4.98531 | overlap 1842689 TCCTGAAACCAAAAA TGCAG GTC CTGCT CCTCATCGTGCAACA TERM 2240 1843100 - 1843082 - R 91 -2.4 -6.23317 | AGAAAAATAAAAAAA GCAACTCC AAA AAAGTTAC TTTTCTCTATTTTAA SPD_1864 1843472 - 1843107 - | hypothetical protein TERM 2241 1843586 - 1843562 - R 89 -7.2 -5.24129 | opp_overlap 1843562 1843564, overlap 1843564 TTTTTTGATAAAAAA TCCAGCCATC TGATG GATGACTGAA TTTCTATTTACTTAT SPD_1865 1844681 - 1843623 - | alcohol dehydrogenase, zinc-containing TERM 2242 1844566 - 1844578 + g 71 -4.8 -4.62069 | ATATGGAGGTCTGTT CCAC AAATA GTGG TTTTTACAATACGCA TERM 2243 1844835 - 1844811 - R 100 -15.9 -5.24531 | opp_overlap 1844811 ACCCTGCATAAAAAA GCAGAAGTTAG TCT CTAACTTCTGC TTTCTCTCTTATGCT TERM 2244 1844811 - 1844835 + r 100 -15.9 -4.25389 | opp_overlap 1844811 ACCCTGCATAAAAAA GCAGAAGTTAG TCT CTAACTTCTGC TTTCTCTCTTATGCT nagA 1845995 - 1844844 - | N-acetylglucosamine-6-phosphate deacetylase TERM 2245 1846109 - 1846128 + r 71 -6.4 -4.20875 | opp_overlap 1846109, overlap 1846104 GGAGATATTTTAAAA GAGCTGGA TTTC TCCAACTC TTCTCTTTTTTAATA TERM 2246 1846128 - 1846109 - R 85 -8.6 -4.18401 | opp_overlap 1846109 1846104 GGAGATATTTTAAAA GAGCTGGA TTTC TCCAACTC TTCTCTTTTTTAATA SPD_1867 1847965 - 1846148 - | hypothetical protein TERM 2247 1848047 - 1848016 - R 88 -7.5 -4.8487 | opp_overlap 1848022, overlap 1848022 CTATCAAAAAAAGAA GAAAAATCCTAAG AGAAAA CTTAGGATTTTTT TATATCAATTCCATT TERM 2248 1848022 - 1848041 + r 89 -6.5 -5.72616 | opp_overlap 1848016 1848022 AAAAAAGAAGAAAAA TCCTAAG AGAAAA CTTAGGA TTTTTTTATATCAAT TERM 2249 1848041 - 1848022 - R 87 -6.5 -5.54403 | opp_overlap 1848022, overlap 1848016 AAAAAAGAAGAAAAA TCCTAAG AGAAAA CTTAGGA TTTTTTTATATCAAT tgt 1849205 - 1848063 - | queuine tRNA-ribosyltransferase TERM 2250 1849241 - 1849272 + H 100 -15.4 -4.36914 | gap 1, opp_overlap 1849248 AAAGACAGTCCCAGT TCATACAGTGTG-CC CAA GGACACACTGTATGA TTTTATCAAAAAAAG SPD_1869 1849335 - 1850192 + | hypothetical protein TERM 2251 1850473 - 1850489 + T 76 -3.6 -5.31456 | opp_overlap 1850473 GCCGTATTGGAAACA GAGGCC GGTAA GCCCTC TTTTTTATAGCTTGA SPD_1871 1851302 - 1851003 - | hypothetical protein TERM 2252 1851276 - 1851265 - G 74 -4.4 -4.95854 | overlap 1851275 TAAAAAATGTAAAAA TGCT CCAA AGCA ACGATCGTTGTTAAA SPD_1873 1851847 - 1851734 - | hypothetical protein TERM 2253 1851910 - 1851930 + r 73 -8.3 -3.60296 | overlap 1851911 AGCTAGTCGCAGGTT GCTCAAAGC ACA GCTTTGAGG TTTCAGATAAAACTG TERM 2254 1851911 - 1851929 + r 84 -11.8 -2.75963 | overlap 1851910 GCTAGTCGCAGGTTG CTCAAAGC ACA GCTTTGAG GTTTCAGATAAAACT TERM 2255 1852031 - 1851989 - R 80 -2.8 -5.73978 | gap 1 ATGACAAAGAAAAAA CGAACGAGA-ATCGCTTCC TATCAC GAAAGCTAGATCTCATTCG TCAAAATGATGTTAC SPD_1874 1853199 - 1852057 - | LysM domain-containing protein TERM 2256 1853272 - 1853261 - R 93 -7.2 -5.68039 | opp_overlap 1853261 1853260 AAATGTAGAAAAAAA GCCC TCTC GGGC CTATTTAACAGAACT SPD_1875 1853985 - 1853365 - | hydrolase, haloacid dehalogenase-like family protein SPD_1876 1855269 - 1853989 - | MATE efflux family protein TERM 2257 1854980 - 1854970 - G 79 -5.4 -4.91459 | GAAGATGGACAAAAA TCCT AAA AGGA AACTTAATAGTAAGG TERM 2258 1855293 - 1855314 + r 79 -8.7 -3.78736 | opp_overlap 1855293 CCTGATGAAAAGAAA CTCAGTTGG TTTC CCAACCGAG TTTACTCCCTCTATC TERM 2259 1855314 - 1855293 - R 100 -10.9 -4.72007 | opp_overlap 1855293 CCTGATGAAAAGAAA CTCAGTTGG TTTC CCAACCGAG TTTACTCCCTCTATC thrC 1856814 - 1855330 - | threonine synthase TERM 2260 1856199 - 1856209 + g 70 -5.4 -4.42806 | opp_overlap 1856199 1856197 CCACGTCGTTAAACA TGTG CTT CACA TTTGTTTGCGCATCG SPD_1878 1858167 - 1856890 - | hypothetical protein TERM 2261 1858260 - 1858238 - R 77 -3.3 -5.57729 | AAATAATATAAAAAA GGAACGAAG AATAA CAACGTTCC TAACACTATACTATA TERM 2262 1862104 - 1862123 + r 91 -12.2 -3.62096 | opp_overlap 1862103 1862102 TGCAGTCCTACAACC CCGAAGAG TAAA CTCTTCGG TTTGCCCTCCTGCCG TERM 2263 1864206 - 1864220 + r 95 -8.6 -4.89605 | GAGTTCTCACTCATT TCTGTC ACT GACAGA TTTATTGTTTTTTTC TERM 2264 1864626 - 1864610 - R 80 -2.9 -5.58454 | CTTATAGTAAAAAAA GCCAGAA TTA TACTGAC TCTTCTATCGCTCAT SPD_1895 1865065 - 1864631 - | cytidine/deoxycytidylate deaminase family protein TERM 2265 1864803 - 1864816 + g 75 -8.1 -4.03234 | opp_overlap 1864792 GGCATGGCTGAACTT CCACC ATAA GGTGG TTTGTCTCGAAAGGC gltX 1866539 - 1865079 - | glutamyl-tRNA synthetase TERM 2266 1866156 - 1866179 + g 70 -8.2 -3.68222 | gap 1 AAGGTATTCATTGAT GTAGCGTGGTG TTT CGCCA-GCTAC TTCTTGGCGTTCGCG TERM 2267 1866631 - 1866657 + r 75 -8.1 -3.75378 | opp_overlap 1866636, overlap 1866636 ATGGATAAAGAGAGT AAAAAGAGTGG GCAAA CCACTCTTTTC TTCTATTATAGACGT TERM 2268 1866652 - 1866636 - R 90 -8 -4.90217 | opp_overlap 1866631 1866636 TAAAGAGAGTAAAAA GAGTGG GCAAA CCACTC TTTTCTTCTATTATA TERM 2269 1866636 - 1866652 + r 90 -8 -4.92791 | opp_overlap 1866636, overlap 1866631 TAAAGAGAGTAAAAA GAGTGG GCAAA CCACTC TTTTCTTCTATTATA pgi 1868012 - 1866663 - | glucose-6-phosphate isomerase SPD_1898 1868178 - 1867999 - | hypothetical protein SPD_1899 1868910 - 1868182 - | glutamine amidotransferase, class 1 TERM 2270 1869002 - 1868984 - R 76 -4.5 -5.20333 | overlap 1868978 TATGGACAAGAAAAA GCTGCCC ACATA GGACAAC TTCTTTCTTATTCGA SPD_1900 1870776 - 1869010 - | ABC transporter, ATP-binding/permease protein SPD_1901 1871024 - 1871233 + | transposase, putative SPD_1902 1873257 - 1871563 - | ABC transporter, ATP-binding/permease protein TERM 2271 1873221 - 1873235 + g 83 -3.5 -5.54907 | opp_overlap 1873214 GGAGCGAAGCCAGGG CCTGC CACTT GTAGG TTTTTATTTTCTGAA TERM 2272 1873307 - 1873284 - R 70 -3.8 -4.84582 | gap 1, opp_overlap 1873285, overlap 1873279 1873285 AAAAAATAGACAAAA GGGAGC-GACA ATG CGTCAGCTCCT TTTCATTCTGTTTGT TERM 2273 1873285 - 1873306 + r 76 -6.6 -4.58724 | gap 1, opp_overlap 1873285 1873284 1873279 AAAAATAGACAAAAG GGAGC-GAC AATGC GTCAGCTCC TTTTCATTCTGTTTG mutS 1875938 - 1873404 - | DNA mismatch repair protein TERM 2274 1875903 - 1875871 - G 80 -4.3 -5.32699 | opp_overlap 1875871 1875874 CGAAAGAGCAAAAAA GCATCTGGATATT GCTTTTT AATATCCACATAC TGTTGCATGCCGGGT TERM 2275 1875991 - 1875962 - R 93 -9.5 -4.56597 | gap 1, opp_overlap 1875961 1875962 1875964 1875965, overlap 1875965 TCTCCTTTTCAAAAA TAA-GTCTTGAGAG CAA CTCCCAAGACCTTA CTTATCTTTCATCAA TERM 2276 1875987 - 1875965 - R 100 -12.8 -4.40561 | opp_overlap 1875964 1875962 1875961 1875965, overlap 1875962 CCTTTTCAAAAATAA GTCTTGAGAG CAA CTCCCAAGAC CTTACTTATCTTTCA TERM 2277 1875965 - 1875987 + r 78 -10.6 -2.74334 | opp_overlap 1875965 1875962, overlap 1875964 1875962 1875961 CCTTTTCAAAAATAA GTCTTGAGAG CAA CTCCCAAGAC CTTACTTATCTTTCA argR 1876435 - 1875989 - | arginine repressor TERM 2278 1876074 - 1876060 - G 73 -7.2 -4.07133 | overlap 1876067 GATCTCGACAAATAA CCAATA AGG TATTGG CACCAGCAACTGTTC TERM 2279 1876806 - 1876796 - g 73 -5.4 -4.58283 | opp_overlap 1876790 CAAGCCTTTGAAAAA GTTG TCG CAAC AGGACCTTACGTTAA argS 1876583 - 1878274 + | arginyl-tRNA synthetase TERM 2280 1878313 - 1878284 - T 90 -11.7 -3.64236 | gap 1, overlap 1878276 ATGTAAATCGCCAAA GTTACTT-GATTGC AAA GCAATCTAAGTAAC TAACGCCAAATCCTA SPD_1906 1878978 - 1878589 - | IS1381, transposase OrfB TERM 2281 1878647 - 1878689 + g 70 -3.6 -4.98531 | overlap 1878634 ATTCGTAATCCGAAG CGTTTACGATGATTTCGATA GGT TGTTGAAAATATTTTAAACG TTTTTACTTTGGCAA SPD_1907 1879142 - 1879618 + | hypothetical protein SPD_1908 1879702 - 1880409 + | response regulator pnpS 1880410 - 1881741 + | sensor histidine kinase PnpS TERM 2282 1881769 - 1881787 + F 93 -8.2 -5.73672 | CTATTTTTAGGAGCA GCCATTTT TCA AAAGTGGC TTTTTTTGATTCTTT TERM 2283 1882122 - 1882107 - g 85 -4 -5.61596 | overlap 1882114 ACGGTGATAAAAAAA TTGACA ACAC TGCCAA AACAGCTGTGATTCA pstS 1881908 - 1882783 + | phosphate ABC transporter, phosphate-binding protein TERM 2284 1882854 - 1882872 + F 71 -7.4 -3.69809 | opp_overlap 1882851 1882847 1882854, overlap 1882851 TAAAGAAGGCAAGTA GGGAGGTG TCG TATCTCCC TTACTTTCTTCACTA pstC 1882901 - 1883764 + | phosphate ABC transporter, permease protein PstC pstA 1883757 - 1884572 + | phosphate ABC transporter, permease protein PstA pstB 1884574 - 1885326 + | phosphate ABC transporter, ATP-binding protein phoU 1885341 - 1885991 + | phosphate transport system regulatory protein PhoU TERM 2285 1886015 - 1886032 + T 77 -3.4 -5.39755 | ATCCTTAAAAGAGAA GAGTAC GATTAA GTGCTC TTTTTTATGGTTGTA SPD_1916 1887038 - 1886598 - | transcriptional regulator TERM 2286 1886912 - 1886922 + g 70 -5.4 -4.33754 | TTGTTAGTGTTGGTC TGGA TTC TCCA TTTTCAATTCTAATT SPD_1917 1887251 - 1887129 - | hypothetical protein gpsA 1887250 - 1888266 + | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase galU 1888288 - 1889187 + | UTP-glucose-1-phosphate uridylyltransferase TERM 2287 1889196 - 1889220 + T 70 -2.2 -5.26875 | opp_overlap 1889190 GGAATAAAATAAAAA GATAAGGT TCAAAAAAT GCCTTATC TTTTTTCATTACACA SPD_1920 1889931 - 1889254 - | hypothetical protein SPD_1921 1890454 - 1889915 - | 5-formyltetrahydrofolate cyclo-ligase family protein TERM 2288 1890017 - 1890001 - G 72 -9.5 -3.03474 | TTTGACAAGGATATA TCGTACT CAA AGTACGA CCAGAAAAATGTTCC SPD_1922 1891596 - 1890466 - | peptidase, M20/M25/M40 family protein TERM 2289 1891623 - 1891647 + r 87 -6.5 -5.46698 | gap 1, opp_overlap 1891623 CCGATATAGCAGAAA GAGGCTGGAA AAAGGG TTCC-GCCTC TTTTTTACTTTTACA SPD_1923 1892362 - 1891664 - | 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase, putative TERM 2290 1892156 - 1892142 - G 73 -10 -2.84794 | overlap 1892139 GGAACTGCAGAATTA CGAGCA TCT TGCTCG ACAACATAATCTTGA TERM 2291 1892425 - 1892408 - R 76 -4.1 -5.15634 | overlap 1892391 TATTCTACCAAAAAA GGCCTCA AATT TGAAACC TTTTTGTCTGTTTTT SPD_1924 1893503 - 1892592 - | hypothetical protein TERM 2292 1893554 - 1893532 - R 100 -7.1 -5.83211 | gap 1, opp_overlap 1893532 CACGAAAAGAAAAAA GTGGC-AATC CATT GATTGGCCAC TTCATTTAGAGAATT pbp1B 1896033 - 1893568 - | penicillin-binding protein 1B TERM 2293 1895909 - 1895922 + g 78 -3.9 -5.2189 | AAAATGGCTGACTTA TCTAA GGTT TTAGA TTTTTTGGTACTTGA TERM 2294 1895981 - 1895999 + g 100 -11.8 -5.13016 | overlap 1895986 TTATTTTTTTGTTTT TGCTGGAA AAA TTCCAGCA TTTTTCGTTTTAATT tyrS 1896175 - 1897431 + | tyrosyl-tRNA synthetase TERM 2295 1897459 - 1897485 + T 81 -6 -4.89233 | gap 1, opp_overlap 1897459 TTATCTATAAACAAA GGAGTTAACCT CGAGAA AGGT-AACTCC TTTTTGCTGTTAATA TERM 2296 1897485 - 1897459 - T 76 -6.7 -4.57482 | gap 1, opp_overlap 1897459 TTATCTATAAACAAA GGAGTTAACCTC GAGA AAGGT-AACTCC TTTTTGCTGTTAATA SPD_1927 1899572 - 1897509 - | cation-transporting ATPase, E1-E2 family protein TERM 2297 1898715 - 1898733 + g 75 -9.6 -3.34506 | opp_overlap 1898714 1898717 CTTCATCAACTCAAT CAGCTGTA AAA TACGGCTG TTCATCTGATTATCT SPD_1928 1899885 - 1899574 - | hypothetical protein rrmA 1900004 - 1900852 + | rRNA (guanine-N1-)-methyltransferase TERM 2298 1900898 - 1900910 + T 73 -7.7 -3.83205 | CCGTACGTATGGTTA CTGAC TTC GTCAG TTTCATCTACAACCT TERM 2299 1900942 - 1900924 - T 78 -10.4 -2.61383 | opp_overlap 1900923, overlap 1900923 AGTTTCATCTACAAC CTCAAAAC CAT GTTTTGAG CTGACTTCGTCAGTT TERM 2300 1900943 - 1900955 + T 82 -7.7 -4.52857 | AAACCATGTTTTGAG CTGAC TTC GTCAG TTTTATCTGCAACCT SPD_1930 1901574 - 1901368 - | hypothetical protein TERM 2301 1901549 - 1901562 + g 78 -2.5 -5.44721 | AAATCCGTCCATTTA TATTT TGAA AAATA TTTTTTTAACATAAT SPD_1931 1901651 - 1902223 + | hypothetical protein TERM 2302 1902332 - 1902355 + T 71 -9 -3.03554 | gap 1, opp_overlap 1902338, overlap 1902335 GGTGGATCAGCATTG CAATG-ACGAC TTC GTCGTACATTG TATATAATTACTTAA TERM 2303 1902422 - 1902378 - T 100 -11.1 -5.30616 | gap 1, opp_overlap 1902380 1902382 1902387, overlap 1902380 1902382 TTACTTAAAGAAAAA GAG-AGAAAAGGAATGATCT TATACC AGATCATTCCTTTTCTGCTT TCTGTAAATCCCTCG TERM 2304 1902380 - 1902420 + T 100 -13.7 -4.06678 | gap 1, opp_overlap 1902378 1902380 1902382, overlap 1902382 1902387 ACTTAAAGAAAAAGA G-AGAAAAGGAATGATCT TATACC AGATCATTCCTTTTCTGC TTTCTGTAAATCCCT TERM 2305 1902419 - 1902380 - T 100 -13.9 -4.2793 | opp_overlap 1902380 1902382 1902387, overlap 1902378 1902382 ACTTAAAGAAAAAGA GAGAAAAGGAATGATCT TATACC AGATCATTCCTTTTCTG CTTTCTGTAAATCCC TERM 2306 1902417 - 1902382 - T 100 -16.5 -3.71991 | opp_overlap 1902380 1902382 1902387, overlap 1902380 1902378 TTAAAGAAAAAGAGA GAAAAGGAATGATCT TATACC AGATCATTCCTTTTC TGCTTTCTGTAAATC TERM 2307 1902382 - 1902417 + T 100 -16.5 -3.07132 | opp_overlap 1902382 1902380 1902378, overlap 1902380 1902387 TTAAAGAAAAAGAGA GAAAAGGAATGATCT TATACC AGATCATTCCTTTTC TGCTTTCTGTAAATC TERM 2308 1902387 - 1902412 + T 100 -10.6 -4.6575 | opp_overlap 1902382 1902380 1902378, overlap 1902382 1902380 GAAAAAGAGAGAAAA GGAATGATCT TATACC AGATCATTCC TTTTCTGCTTTCTGT TERM 2309 1902451 - 1902473 + T 83 -11.4 -2.89921 | overlap 1902443 CGGAGTGTGTTTGGC GCTTTGATAC GAA GTGTCAAAGC TGTATAAACGTTACT TERM 2310 1902753 - 1902727 - T 100 -11 -5.27769 | opp_overlap 1902730 AGAAAAAACTAAAAA GAATGTAGGG TTTATTT CCCTACATTC TTAAAATAACTTAGT TERM 2311 1903098 - 1903119 + T 88 -7.3 -5.02476 | opp_overlap 1903098, overlap 1903084 ACAGCATTTAAAAAA GCGAATTTC AATC GAAACTCGC TTTTTTACAAAATGT TERM 2312 1903119 - 1903098 - T 100 -9.5 -5.11613 | opp_overlap 1903098 1903084 ACAGCATTTAAAAAA GCGAATTTC AATC GAAACTCGC TTTTTTACAAAATGT malP 1905526 - 1903268 - | maltodextrin phosphorylase TERM 2313 1904173 - 1904194 + g 71 -5.3 -4.60487 | gap 1, overlap 1904165 1904173 1904174 TTTCTTTGACAGCTG CT-TTGTCTT CAT AAGACAAAAG TTTTTCAAGCTCATC TERM 2314 1905396 - 1905409 + g 81 -6.7 -4.7078 | TAAACTTTTTTCTTA CCAGT GTTG ACTGG TTTTTGGCTGCTTGC malQ 1907069 - 1905552 - | 4-alpha-glucanotransferase TERM 2315 1907172 - 1907184 + H 83 -4.9 -5.43514 | overlap 1907176 AGCATAATTGCAAGC GTTTT TAA AAAAC TTTTTTGATTATTTT TERM 2316 1907380 - 1907359 - H 75 -8.7 -3.4376 | gap 1, opp_overlap 1907359 AGATAGGGATTAGAA CCAGG-GAGG TAG CCCCTCCTGG TTTCCCTCTTTAGAC TERM 2317 1907359 - 1907380 + H 73 -7.9 -3.81137 | opp_overlap 1907359 AGATAGGGATTAGAA CCAGGGAGG TAGC CCCTCCTGG TTTCCCTCTTTAGAC TERM 2318 1908640 - 1908624 - g 73 -2.3 -5.30348 | overlap 1908627 ACTGAACAACAAAAA GTATTAT ATG ATAAGAC TAACGAAATCCCAGC malX 1907619 - 1908890 + | maltose/maltodextrin ABC transporter, maltose/maltodextrin-binding protein TERM 2319 1909502 - 1909516 + G 72 -8.6 -3.56594 | overlap 1909481 AAGTTGTTGGACTGG GTTGGT TTG ACCAAC TTTACAAACATTTGG TERM 2320 1909702 - 1909714 + G 70 -9.1 -3.22068 | TTTCCTTCTTCCTTG GGCTG TCC CAGCC TTCATCACTATCTTG malC 1909001 - 1910293 + | maltodextrin ABC transporter, permease protein malD 1910295 - 1911137 + | maltodextrin ABC transporter, permease protein TERM 2321 1911145 - 1911131 - f 73 -8.6 -3.29043 | opp_overlap 1911118, overlap 1911118 AAGTGGTGGCGACAA GGGATA ATT TATCCC CGCCACCCTTTTTCA malA 1911390 - 1912190 + | maltodextrose utilization protein MalA malR 1912200 - 1913186 + | maltose operon transcriptional repressor TERM 2322 1913257 - 1913219 - f 100 -14.8 -5.0925 | opp_overlap 1913219 CGTTAAAAGCAAAAA CGCATAGTATCAGGTATT GAA AAAACTTGATACTATGCG TTTTAATGTGGGAAG TERM 2323 1913219 - 1913257 + F 100 -17 -4.34402 | opp_overlap 1913219 CGTTAAAAGCAAAAA CGCATAGTATCAGGTATT GAA AAAACTTGATACTATGCG TTTTAATGTGGGAAG TERM 2324 1913268 - 1913282 + G 70 -5.7 -4.47328 | ATGCGTTTTAATGTG GGAAG ATTTA CTTCC TTTTCTACTGAAATT TERM 2325 1913369 - 1913387 + G 72 -10.4 -2.61383 | overlap 1913368 GCTAGCCGCAGGTTG CTCAAAAC ACT GTTTTGAG GTTGTAGATGAAACT TERM 2326 1913413 - 1913401 - g 73 -7.7 -3.83205 | AGGTTGTAGATGAAA CTGAC GAA GTCAG TAACCATACCTACGG SPD_1939 1913253 - 1913474 + | hypothetical protein SPD_1940 1914419 - 1913478 - | hypothetical protein TERM 2327 1913642 - 1913675 + g 91 -8.1 -5.35222 | overlap 1913643 GATTATAGGTTCCTT CTGCATCGTGGATCA TGGT TGCTCCGCGGTGCAA TTTTTTATGGATTTT TERM 2328 1913643 - 1913674 + g 88 -11.6 -3.78693 | overlap 1913642 ATTATAGGTTCCTTC TGCATCGTGGATCA TGGT TGCTCCGCGGTGCA ATTTTTTATGGATTT aspS 1916160 - 1914397 - | aspartyl-tRNA synthetase TERM 2329 1914600 - 1914587 - G 70 -8.1 -3.7108 | AGCCCGATAGCCAAA CCACC GTGT GGTGG GAAACCATAGTCCAT TERM 2330 1915964 - 1915954 - G 70 -5.4 -4.45738 | CACCTCAATAACAAA TTCG CTA CGAA GGCTTTCAGCTGTTG SPD_1942 1916470 - 1916279 - | hypothetical protein TERM 2331 1916340 - 1916352 + g 73 -7.7 -3.83205 | CCGTAGGTATGGTTA CTGAC TTC GTCAG TTTCATCTACAACCT TERM 2332 1916384 - 1916366 - G 72 -10.4 -2.61383 | opp_overlap 1916365, overlap 1916365 AGTTTCATCTACAAC CTCAAAAC CAT GTTTTGAG CTGACTTCGTCAGTT TERM 2333 1916385 - 1916397 + g 70 -7.7 -3.72695 | AAACCATGTTTTGAG CTGAC TTC GTCAG TTTCATCCACAACCT TERM 2334 1916429 - 1916411 - G 72 -10.4 -2.61383 | overlap 1916410 AGTTTCATCCACAAC CTCAAAAC AGT GTTTTGAG CAACCTGCGGCTAGC TERM 2335 1916506 - 1916488 - R 100 -9.6 -5.16133 | opp_overlap 1916487 1916488 AGTATAATACAAAAA TCCGATGA ACT TCACCGGA CTCTTTTATTTTGAA SPD_1943 1916742 - 1916512 - | hypothetical protein SPD_1944 1917401 - 1916760 - | hypothetical protein TERM 2336 1917320 - 1917308 - G 74 -9.1 -3.51976 | overlap 1917304 AAGCGCCTAAAGCAA GCGAC GCA GTCGC GAGCCCCTGAATAAA SPD_1945 1918147 - 1917413 - | hypothetical protein SPD_1946 1918347 - 1918150 - | hypothetical protein SPD_1947 1918553 - 1918347 - | transcriptional regulator, putative TERM 2337 1918517 - 1918529 + g 77 -7.7 -4.14615 | GATTGAGACCATCGC GAGCT CGA AGCTC TTTTAGACGATTTTT SPD_1948 1919027 - 1918563 - | hypothetical protein TERM 2338 1918932 - 1918959 + g 89 -10.1 -4.2928 | GTAACACATCTTTTT CTTTTTGACAA ATATAG TTGTCAAAAAG TTTATGATTTTTGTC TERM 2339 1919013 - 1918992 - G 86 -4.4 -5.45802 | TTTGCAAAAGAAAAA GGTCAGGA GTAGGT TACTGACC AGTTTATCTATCATT SPD_1949 1919206 - 1919027 - | hypothetical protein TERM 2340 1919076 - 1919088 + g 73 -7.7 -3.83205 | CCGTAGGTATGGTTA CTGAC TTC GTCAG TTTCATCTACAACCT TERM 2341 1919120 - 1919102 - G 72 -10.4 -2.61383 | opp_overlap 1919101, overlap 1919101 AGTTTCATCTACAAC CTCAAAAC CAT GTTTTGAG CTGACTTCGTCAGTT hisS 1920492 - 1919203 - | histidyl-tRNA synthetase SPD_1951 1921817 - 1920570 - | hypothetical protein SPD_1952 1922858 - 1922007 - | transcriptional activator Rgg/GadR/MutR family protein SPD_1953 1922967 - 1922833 - | hypothetical protein SPD_1954 1922982 - 1923323 + | hypothetical protein TERM 2342 1923354 - 1923373 + F 100 -10 -4.77438 | opp_overlap 1923354 1923366 TTAAAGATGAAAAAA GCAAGCCG AAAA TGGCTTGC TTTTTGATACTCAAT TERM 2343 1923373 - 1923354 - f 100 -9.3 -5.32699 | opp_overlap 1923354, overlap 1923366 TTAAAGATGAAAAAA GCAAGCC GAAAAT GGCTTGC TTTTTGATACTCAAT SPD_1955 1923387 - 1923506 + | hypothetical protein ilvD 1925235 - 1923532 - | dihydroxy-acid dehydratase TERM 2344 1924107 - 1924095 - G 74 -9.1 -3.52073 | opp_overlap 1924094 1924093 CGTTCAAGATGATAA GCGGA CCA TCCGC ACGTTTTGGATTTTC SPD_1957 1926400 - 1925468 - | transketolase, C-terminal subunit SPD_1958 1927254 - 1926397 - | transketolase N-terminal subunit ulaA 1928604 - 1927258 - | ascorbate-specific PTS system enzyme IIC SPD_1960 1928901 - 1928617 - | PTS system, IIB component, putative TERM 2345 1928730 - 1928714 - G 76 -10.9 -2.74701 | overlap 1928711 ACATCTCCAAGATGA CTAGCTG AAT CAGCTAG ATCACGACCAACAAT SPD_1961 1930935 - 1928905 - | transcriptional regulator, BglG family protein SPD_1962 1931126 - 1932133 + | hypothetical protein TERM 2346 1932341 - 1932370 + F 100 -9.4 -5.38348 | TTGATATTTAACACC TTCTCCTGTCTG CCGTGT CGGATAGGAGAA TTTTTTCATCTTTTT TERM 2347 1932377 - 1932417 + F 70 -8 -3.29987 | gap 1, overlap 1932375 1932381 1932388 ATAGGAGAATTTTTT CATCTTTTTTTGTCAAGTA ACTT TACTTTACAAAAAAA-ATG TGTTATCCTAGTATG TERM 2348 1932381 - 1932414 + F 75 -9.9 -2.5214 | overlap 1932377 1932375 1932388 GAGAATTTTTTCATC TTTTTTTGTCAAGTA ACTT TACTTTACAAAAAAA ATGTGTTATCCTAGT rpmF 1932488 - 1932670 + | 50S ribosomal protein L32 TERM 2349 1932827 - 1932800 - g 85 -8.6 -4.31412 | gap 1, opp_overlap 1932803 AAATACTCACCAAAA CTTC-GCAAACAC GTT GTGTTTACAGAAG TGAAGTAAGCATTCA rpmG 1932686 - 1932835 + | 50S ribosomal protein L33 TERM 2350 1932861 - 1932886 + T 82 -5.6 -5.24551 | gap 1, opp_overlap 1932861 1932867, overlap 1932867 CGAATCAATACAGAA GA-AAAACGCT TGATC AGCGTTTTTTC TTTTTGTTAATTTCA TERM 2351 1932879 - 1932867 - T 80 -4.8 -5.28561 | opp_overlap 1932861 1932867, overlap 1932861 AATACAGAAGAAAAA CGCT TGATC AGCG TTTTTTCTTTTTGTT TERM 2352 1932867 - 1932879 + T 93 -4.8 -6.01725 | opp_overlap 1932867 1932861, overlap 1932861 AATACAGAAGAAAAA CGCT TGATC AGCG TTTTTTCTTTTTGTT TERM 2353 1933275 - 1933254 - T 90 -8.1 -5.1925 | opp_overlap 1933254 TGAGAATCCAAAAAA TCTTCCTAC ATAT GTAAGAAGA TTTTTTAGTTCAGAA TERM 2354 1933254 - 1933275 + T 84 -5.9 -5.26875 | opp_overlap 1933254 TGAGAATCCAAAAAA TCTTCCTAC ATAT GTAAGAAGA TTTTTTAGTTCAGAA pcpA 1935357 - 1933315 - | choline binding protein PcpA TERM 2355 1934299 - 1934266 - G 100 -13.5 -4.69622 | gap 1, opp_overlap 1934266 AGATAATGTTAAAAA TTTTGGTAAAC-CGTT CAT AACGTGTTTACCAAAA TTTTTAACATTATCT TERM 2356 1934266 - 1934299 + g 100 -13.5 -4.69622 | gap 1, opp_overlap 1934266 AGATAATGTTAAAAA TTTTGGTAAAC-CGTT CAT AACGTGTTTACCAAAA TTTTTAACATTATCT TERM 2357 1935080 - 1935092 + g 70 -3.4 -4.84359 | ACGGTAAATACTTTA TCAC CTACT GTGA TTTTTGTAGGAATCG TERM 2358 1935588 - 1935531 - H 100 -30.7 -4.45664 | opp_overlap 1935539 TTAAGTCAAGGAAAA TTAACCCACTTTAATTTCTTTTTTAAC CCGT GTTAAAAAAGAAATTAAAGTGGGTTAA AAAAGAAATTAAAGT TERM 2359 1935539 - 1935580 + H 100 -19.3 -2.52464 | opp_overlap 1935531 AGGAAAATTAACCCA CTTTAATTTCTTTTTTAAC CCGT GTTAAAAAAGAAATTAAAG TGGGTTAAAAAAGAA TERM 2360 1935876 - 1935851 - g 83 -3.3 -5.60864 | overlap 1935853 1935868 GATAGATGAAAAAAA CATTGACACCT ACCA AAGAGTCAATA GACTCCCTGCGAAAC SPD_1966 1935714 - 1936283 + | IS1381, transposase OrfA TERM 2361 1936286 - 1936270 - f 79 -3.8 -5.40474 | ATCGCCCTAAAAAAA GAATTA GCGAA TAATTC TGGTAAAAAGAAATT TERM 2362 1936640 - 1936598 - g 70 -3.6 -4.98531 | overlap 1936632 TTGCCAAAGTAAAAA CGTTTAAAATATTTTCAACA ACC TATCGAAATCATCGTAAACG CTTCGGATTACGAAT SPD_1967 1936309 - 1936698 + | IS1381, transposase OrfB SPD_1968 1937076 - 1936750 - | hypothetical protein TERM 2363 1937252 - 1937283 + r 73 -4.5 -4.9218 | gap 1, opp_overlap 1937257, overlap 1937254 1937257 TTCTTCTGTTTCACG CGA-AACACCCTGC GCCAA GCAAGGTGTTCTTG TTTTTATACTCAATG TERM 2364 1937257 - 1937277 + r 74 -6.8 -4.36508 | opp_overlap 1937257, overlap 1937254 1937252 CTGTTTCACGCGAAA CACCCTGC GCCAA GCAAGGTG TTCTTGTTTTTATAC TERM 2365 1937277 - 1937257 - R 77 -9 -3.59979 | opp_overlap 1937257 1937254 1937252 CTGTTTCACGCGAAA CACCCTGC GCCAA GCAAGGTG TTCTTGTTTTTATAC TERM 2366 1937337 - 1937355 + r 78 -10.4 -2.61264 | overlap 1937336 GCTAGCTGCAGGCTG CTCAAAAC ACT GTTTTGAG GTTGTAGATGGAAGC SPD_1969 1939282 - 1937402 - | glycosyl hydrolase-related protein SPD_1970 1940145 - 1939276 - | ROK family protein TERM 2367 1940199 - 1940163 - R 73 -4.4 -4.91109 | opp_overlap 1940163 TTTTTACCATAAAAA GGGGCGAATCAGCA GTTAGTCCT TACTTTTTCGCCCC TCCTTTCTTTTGATG TERM 2368 1940225 - 1940237 + r 72 -4.9 -4.67552 | TGATGTTTACTTTTT GAAAT TAA ATTTC TTCTTTTTTGATGAA SPD_1971 1942874 - 1940229 - | hypothetical protein TERM 2369 1941361 - 1941379 + g 75 -9.6 -3.28712 | opp_overlap 1941372 CGGTGTTCTTGTTCT CCTTCCAG CAA TTGGAAGG TTGTCCAAGAAAGCG SPD_1972 1944245 - 1942965 - | hypothetical protein TERM 2370 1944547 - 1944562 + G 81 -5.4 -5.14965 | GCCCCAGACCAGTGA CCAGGA TGGA TCTTGG TTTTTTGATCCGCAT TERM 2371 1945597 - 1945583 - g 71 -7.1 -3.80551 | overlap 1945572 GAAACAGCCAGCAAA GCCGA CCCTC TCGGC ATCAATGGCCGCCAC SPD_1973 1944416 - 1946500 + | alpha-1,2-mannosidase, putative TERM 2372 1946507 - 1946537 + T 100 -11.3 -4.4017 | opp_overlap 1946510, overlap 1946510 AATCACTAATAACCA AAAGAACCTTTGC ATCGC GCAAAGGTTCTTC TTTTATGAAACTTGG TERM 2373 1946510 - 1946534 + T 100 -13 -4.31397 | opp_overlap 1946510, overlap 1946507 CACTAATAACCAAAA GAACCTTTGC ATCGC GCAAAGGTTC TTCTTTTATGAAACT TERM 2374 1946534 - 1946510 - T 100 -13.7 -4.5774 | opp_overlap 1946507 1946510 CACTAATAACCAAAA GAACCTTTGCA TCG CGCAAAGGTTC TTCTTTTATGAAACT SPD_1974 1948219 - 1946540 - | hypothetical protein TERM 2375 1946633 - 1946649 + g 70 -2.9 -5.1287 | TCCTGCGAAATACAA GGTTGGT AGC GTCAGCC TTTTTTCAGTCTCAC TERM 2376 1947056 - 1947042 - G 70 -5.6 -4.3467 | ACTTGCACATGAAAA GCAGCG ATT CGTTGC CCTAGCTTCAAATCT TERM 2377 1947646 - 1947658 + g 80 -6.3 -4.67904 | opp_overlap 1947646 CCTGCAGGTCACGAA TGGTT TCA AACCA TTTTTCAAATTCATA TERM 2378 1948285 - 1948261 - H 73 -8.7 -3.28712 | opp_overlap 1948249, overlap 1948263 TTCTCTTGTTCACAA GATTATCCACA GGT TGTGGATAATA AACCATGATCTAACA TERM 2379 1948283 - 1948263 - H 87 -11.3 -3.21276 | overlap 1948261 CTCTTGTTCACAAGA TTATCCACA GGT TGTGGATAA TAAACCATGATCTAA TERM 2380 1949044 - 1949078 + H 71 -8.7 -3.07192 | gap 1 AAGTTATGTTGCACC GTCCAGGCAAGGAGTT AGAA AACTTGTTGCC-GGAC TATCTTGAAAGGCTT TERM 2381 1949340 - 1949324 - H 73 -9.5 -2.78547 | overlap 1949327 TCACGGCATCAAGGA CAACCAA GAA TTGGTTG AAAAAACAATGGCTG TERM 2382 1949761 - 1949715 - H 100 -24.2 -4.65895 | opp_overlap 1949715 GCTTCTATCGAAAAA CTTTCTTGAAGCCAACATCTTC AAG AAAAATGTTGGCTTCAAGAAAG TTTTGGCCTTTGAAT TERM 2383 1949715 - 1949761 + H 100 -21.3 -4.24404 | opp_overlap 1949715 GCTTCTATCGAAAAA CTTTCTTGAAGCCAACATCTT CAAGA AAAATGTTGGCTTCAAGAAAG TTTTGGCCTTTGAAT argF 1950271 - 1951287 + | ornithine carbamoyltransferase TERM 2384 1951320 - 1951353 + F 89 -9 -4.58424 | gap 1, opp_overlap 1951313 TCTACCAACAGCTAT GAGGGCTGCGACTAA TAGCT TTAGTC-CGGTCCTC TTTTATATAATGGTA arcC 1951452 - 1952399 + | carbamate kinase TERM 2385 1952656 - 1952629 - g 85 -5.6 -5.30575 | opp_overlap 1952627 1952629 1952630, overlap 1952630 GAAAAAGCTAAAAAA GGGTTTAAGATG CCTT CATCTTACACCG TATTATTGATAATCA TERM 2386 1952655 - 1952630 - g 76 -9.1 -3.75905 | opp_overlap 1952629 1952627 1952630, overlap 1952629 AAAAAGCTAAAAAAG GGTTTAAGATG CCTT CATCTTACACC GTATTATTGATAATC SPD_1978 1952608 - 1954119 + | hypothetical protein SPD_1979 1954141 - 1955472 + | hypothetical protein TERM 2387 1955560 - 1955516 - T 81 -10.9 -2.64199 | opp_overlap 1955518, overlap 1955515 GACCGATTAATGAAC TGCACCCCAAAAGTTAGAC AGAATAA ATCTAACTTTTGGGGTGTT TTATTATGAAATTGA TERM 2388 1955518 - 1955558 + T 100 -17.2 -4.78839 | opp_overlap 1955516 1955515 CCGATTAATGAACTG CACCCCAAAAGTTAGA CAGAATAAA TCTAACTTTTGGGGTG TTTTATTATGAAATT SPD_1981 1956167 - 1955877 - | hypothetical protein SPD_1982 1956304 - 1956155 - | hypothetical protein TERM 2389 1956342 - 1956322 - H 72 -2.5 -5.23943 | overlap 1956323 CAGCAAAAAAATAAA CTCGTTCCT AGC AAGACCGAA CAAGCTCCTATTGCA TERM 2390 1956600 - 1956583 - H 88 -7.7 -5.1167 | opp_overlap 1956583 AACGCAATACAAAAA GAGCCTG TTGC CAAGCTC TTTATACTCAATGAA SPD_1983 1956590 - 1956769 + | hypothetical protein TERM 2391 1956811 - 1956837 + T 79 -8 -4.04474 | TATTAGTCTATTATT TCTTCTCAGCGC GAA GGGCTGACAAGA TTTGTGTACGGATAT SPD_1984 1957705 - 1956806 - | hypersensitive-induced reaction protein 4 SPD_1985 1958986 - 1957835 - | alcohol dehydrogenase, iron-containing fucI 1960898 - 1959132 - | L-fucose isomerase SPD_1987 1964071 - 1960955 - | fucolectin-related protein TERM 2392 1961778 - 1961788 + g 70 -5.4 -4.35348 | GTAGCTACCTTATTT GTAG AGA CTAC TTTATCTTCTGTTAT SPD_1988 1966375 - 1964081 - | hypothetical protein TERM 2393 1964763 - 1964785 + g 72 -3.5 -5.0666 | TGGATTTGCCCATTA CTACCTA TTTTTGTTT TAGGTAG TTTCTTTTTTAACTC TERM 2394 1966054 - 1966020 - G 79 -9.4 -3.65529 | overlap 1966045 ATAGCTGTATCTAAA TCTAGCTCTCTTTCAT ACA ATGAAAGAGCACAAGA CTGAATATCTATATG TERM 2395 1966424 - 1966396 - R 100 -13.3 -4.07687 | opp_overlap 1966387 1966394 ACCTCTCTTCCAAAA TGGAGGTGATATC CCA AATACCACCTCCA CACTTTCTACTACTT SPD_1989 1967234 - 1966434 - | PTS system, IID component SPD_1990 1968004 - 1967231 - | PTS system, IIC component TERM 2396 1967873 - 1967863 - G 71 -6.8 -4.0342 | CTGAACCAATAAGAA CACC TTG GGTG AAATCTCCTAAGACT SPD_1991 1968499 - 1968029 - | PTS system, IIB component SPD_1992 1968933 - 1968490 - | PTS system, IIA component fucU 1969354 - 1968914 - | RbsD/FucU transport protein family protein fucA 1970004 - 1969366 - | L-fuculose phosphate aldolase fucK 1971522 - 1970119 - | L-fuculose kinase FucK, putative TERM 2397 1971795 - 1971767 - g 71 -6.8 -4.10007 | gap 1, overlap 1971769 AGAATTGCCGTAAAA GAGCTGGCAGAAA TCAC TTTCT-CCAGCAC AAGTACCTTACGTCG TERM 2398 1971793 - 1971769 - g 70 -8 -3.64488 | gap 1, overlap 1971767 AATTGCCGTAAAAGA GCTGGCAGAAA TCAC TTTCT-CCAGC ACAAGTACCTTACGT TERM 2399 1971950 - 1971936 - g 79 -5 -5.1101 | opp_overlap 1971948 GTACTAGGCAAAAAA GACTAA TCG CTAGTC TCGCTAAAGACTTTA SPD_1996 1971698 - 1972471 + | fucose operon repressor, putative TERM 2400 1972714 - 1972769 + T 93 -10 -4.13343 | opp_overlap 1972718 1972723, overlap 1972715 1972723 GGAGTAAACCTTCCC ACAATAAAACGCATAGTATCAAGTTT TTGC ACACCTGATATTATGCGTTTTTTTGA TTTTAAAGACTTTGT TERM 2401 1972715 - 1972768 + T 90 -13.5 -3.07283 | opp_overlap 1972718 1972723, overlap 1972714 1972723 GAGTAAACCTTCCCA CAATAAAACGCATAGTATCAAGTTT TTGC ACACCTGATATTATGCGTTTTTTTG ATTTTAAAGACTTTG TERM 2402 1972765 - 1972718 - T 77 -9.4 -3.30635 | opp_overlap 1972715 1972714 1972723, overlap 1972723 TAAACCTTCCCACAA TAAAACGCATAGTATCAAGTTT TTGC ACACCTGATATTATGCGTTTTT TTGATTTTAAAGACT TERM 2403 1972760 - 1972723 - T 100 -9.3 -4.77165 | opp_overlap 1972715 1972714 1972723, overlap 1972718 CTTCCCACAATAAAA CGCATAGTATCAAGTTT TTGC ACACCTGATATTATGCG TTTTTTTGATTTTAA TERM 2404 1972723 - 1972760 + T 100 -9.3 -5.79588 | opp_overlap 1972723 1972718, overlap 1972715 1972714 CTTCCCACAATAAAA CGCATAGTATCAAGTTT TTGC ACACCTGATATTATGCG TTTTTTTGATTTTAA TERM 2405 1973085 - 1973058 - T 100 -9.2 -5.08169 | opp_overlap 1973058 AGATACGTCAAAAAA GCCCTTAACTAC GGCC ATAGTTAGGGGC TTTGGTGTTCTAATG TERM 2406 1973058 - 1973085 + T 93 -10.7 -3.98159 | opp_overlap 1973058 AGATACGTCAAAAAA GCCCTTAACTA CGGCCA TAGTTAGGGGC TTTGGTGTTCTAATG TERM 2407 1973177 - 1973191 + T 70 -3.6 -4.92783 | TTGATGATCTAAATT TAGTGT GGT ATACTA TTTTTGTCATCGGTT TERM 2408 1973401 - 1973428 + T 93 -10.7 -3.98159 | opp_overlap 1973401 AGATACGTCAAAAAA GCCCTTAACTA TGGCAC TAGTTAGGGGC TTTGGTGTTCTAATG TERM 2409 1973428 - 1973401 - T 95 -8.5 -5.08169 | opp_overlap 1973401 AGATACGTCAAAAAA GCCCTTAACTA TGGCAC TAGTTAGGGGC TTTGGTGTTCTAATG TERM 2410 1973592 - 1973567 - T 100 -10.5 -5.1861 | opp_overlap 1973567 1973568, overlap 1973568 TCTAGTATCAAAAAA CCGACTAGCTC TTAT GAACTAGTCGA TTTCTCATCAATGCG TERM 2411 1973568 - 1973591 + T 77 -9.6 -2.98447 | opp_overlap 1973568 1973567, overlap 1973567 CTAGTATCAAAAAAC CGACTAGCTC TTAT GAACTAGTCG ATTTCTCATCAATGC TERM 2412 1973591 - 1973568 - T 91 -11.8 -3.70443 | opp_overlap 1973567 1973568, overlap 1973567 CTAGTATCAAAAAAC CGACTAGCTC TTAT GAACTAGTCG ATTTCTCATCAATGC adcA 1975105 - 1973600 - | zinc ABC transporter, zinc-binding lipoprotein TERM 2413 1974834 - 1974845 + g 72 -4.4 -4.70319 | AGCAATTTAGGTACC CATG TTTC CATG TTTTCATTTTCATAA adcB 1975921 - 1975115 - | zinc ABC transporter, permease protein TERM 2414 1975255 - 1975241 - G 77 -6.4 -4.60487 | overlap 1975246 TACCATTCCCAAAAA GCCAAT CGC ACTGGC AAGCAGCATAACCGA adcC 1976618 - 1975914 - | zinc ABC transporter, ATP-binding protein adcR 1977058 - 1976618 - | adc operon repressor AdcR TERM 2415 1976938 - 1976921 - GH 73 -8.5 -3.29263 | AGATTCCTCTGACAA GAGCATA AGGA TATGCTC CTGAGTATTGGTCAG SPD_2001 1977043 - 1977180 + | hypothetical protein dltD 1978481 - 1977213 - | undecaprenol-phosphate-poly(glycerophosphate subunit) D-alanine transfer protein dltC 1978713 - 1978474 - | D-alanine--poly(phosphoribitol) ligase subunit 2 dltB 1979971 - 1978727 - | protein DltB TERM 2416 1978837 - 1978855 + g 83 -5.2 -5.1848 | overlap 1978834 TCCAGCGATTCTCAG GTAGGGCA GCC TTCCCTGC TTTTTTCCGTTCCTT TERM 2417 1978863 - 1978878 + g 85 -2.5 -5.7946 | TTCCCTGCTTTTTTC CGTTC CTTATT GAGCG TTTTTTTCTTGCGAA TERM 2418 1979465 - 1979453 - G 70 -7.7 -3.75015 | opp_overlap 1979453, overlap 1979462 ATAATTTTCATTAAA TCGCT TAA AGCGA TCGATTGGACCACTC dltA 1981518 - 1979968 - | D-alanine--D-alanyl carrier protein ligase SPD_2006 1981670 - 1981539 - | hypothetical protein TERM 2419 1981948 - 1981910 - R 83 -7.6 -4.77165 | CTTCCCATAATAAAA CACACAATATCAAGTTTT TTC AACACCTGATACTATGCG CTTTTCTGATTTTTA SPD_2007 1983162 - 1981984 - | transporter, major facilitator family protein TERM 2420 1982052 - 1982040 - G 75 -7.7 -4.10164 | CTATCATCAGACAAA TGGCT GAT AGCCA AAAACTGATGCTAAT TERM 2421 1983125 - 1983105 - G 70 -3.3 -4.88918 | TTACTCTAAAGAAAA TATCTGCTA AAT TTGCAAATA ATTGAGAGACTAACA TERM 2422 1983428 - 1983411 - H 77 -4.9 -5.1286 | gap 1 TAAAAATCAGAAAAA CGCTCAAA TCC TTTG-GCG CTCTAAGCTTTTCTA TERM 2423 1984667 - 1984682 + H 71 -9 -2.96656 | overlap 1984669 TTGGAATTCCTAGTT GACGGA TACC TCCGTC TGGTTTAGGTATCTC TERM 2424 1985090 - 1985059 - H 79 -10.3 -2.91264 | opp_overlap 1985060 1985066, overlap 1985066 CTTTCTAGCGACAGA CCTCAAACAGTCT CTCCCC AGACTGTTTGAGT ATTCACCCCTTCGCT TERM 2425 1985060 - 1985089 + H 90 -13.8 -3.04322 | opp_overlap 1985059 1985066, overlap 1985066 TTTCTAGCGACAGAC CTCAAACAGTCT CTCCCC AGACTGTTTGAG TATTCACCCCTTCGC TERM 2426 1985605 - 1985588 - H 100 -9.9 -5.67063 | opp_overlap 1985588 CGTACTACAAAAAAA CGACGAT TTAA ATCGTCG TTTTGCTAAGATAAA TERM 2427 1985588 - 1985605 + H 93 -9.9 -4.26903 | opp_overlap 1985588 CGTACTACAAAAAAA CGACGAT TTAA ATCGTCG TTTTGCTAAGATAAA SPD_2009 1986006 - 1986593 + | hypothetical protein TERM 2428 1986590 - 1986637 + T 100 -21.8 -3.40371 | opp_overlap 1986596 1986602, overlap 1986596 1986602 AACCTACGTGAATTT CTAAAATATAAACCCTGCCT AGATATAA AGGCAGGGTTTATATTTTAG TTAATTGCTCAAGTA TERM 2429 1986631 - 1986596 - T 100 -15 -4.14392 | opp_overlap 1986590 1986596 1986602, overlap 1986602 CGTGAATTTCTAAAA TATAAACCCTGCCT AGATATAA AGGCAGGGTTTATA TTTTAGTTAATTGCT TERM 2430 1986596 - 1986631 + T 100 -15 -4.50193 | opp_overlap 1986596 1986602, overlap 1986590 1986602 CGTGAATTTCTAAAA TATAAACCCTGCCT AGATATAA AGGCAGGGTTTATA TTTTAGTTAATTGCT TERM 2431 1986625 - 1986602 - T 100 -9.6 -4.45168 | opp_overlap 1986596 1986590 1986602, overlap 1986596 TTTCTAAAATATAAA CCCTGCCT AGATATAA AGGCAGGG TTTATATTTTAGTTA TERM 2432 1986602 - 1986625 + T 100 -9.6 -4.50859 | opp_overlap 1986602 1986596, overlap 1986596 1986590 TTTCTAAAATATAAA CCCTGCCT AGATATAA AGGCAGGG TTTATATTTTAGTTA SPD_2010 1986826 - 1986680 - | hypothetical protein TERM 2433 1987046 - 1987031 - R 77 -9 -3.53224 | CATTTTTTGCTGAAA TTGGGC TCTT GCCCAA GCTCTATCAACATAA glpF 1987778 - 1987074 - | glycerol uptake facilitator protein TERM 2434 1987448 - 1987460 + g 70 -7.7 -3.75153 | CTGCATTTTCTTCTG CCTCA TAG TGAGG TTTGAATTGCAACCA glpO 1989674 - 1987848 - | alpha-glycerophosphate oxidase TERM 2435 1989620 - 1989631 + g 80 -2.2 -5.63103 | overlap 1989615 TCAAGAGGTCCAGGG TGCG TTCC TGCA TTTTTTTAATTGACA glpK 1991224 - 1989716 - | glycerol kinase TERM 2436 1991380 - 1991362 - R 79 -4.5 -5.27923 | GAATTTCACAAAAAA GACCTGG ATTAA CCAAGCC TTTTAAGTGAATAAT SPD_2014 1992810 - 1991383 - | hypothetical protein hslO 1992975 - 1993847 + | Hsp33-like chaperonin SPD_2016 1993858 - 1994814 + | TIM-barrel protein, nifR3 family protein, putative TERM 2437 1994879 - 1994928 + T 84 -5.9 -5.21709 | opp_overlap 1994882, overlap 1994882 CTTTCCTCATCAAAA AAACTCCGTAGTCTCTAGC GCTATAAATCCG GCTAGAGATTACAGAGTTA TTTTTTAATCTAAAC TERM 2438 1994882 - 1994925 + T 83 -7.6 -4.69962 | opp_overlap 1994882, overlap 1994879 TCCTCATCAAAAAAA CTCCGTAGTCTCTAGC GCTATAAATCCG GCTAGAGATTACAGAG TTATTTTTTAATCTA TERM 2439 1994925 - 1994882 - T 93 -7.6 -5.52384 | opp_overlap 1994882 1994879 TCCTCATCAAAAAAA CTCCGTAGTCTCTAGC GCTATAAATCCG GCTAGAGATTACAGAG TTATTTTTTAATCTA cbpA 1997149 - 1995044 - | choline binding protein A TERM 2440 1996054 - 1996066 + g 72 -9.1 -3.41234 | CTTGCTTAATTTTTT CCTCG TCT CGAGG TTCCTTAGCTTCCTC SPD_2018 1997755 - 1997228 - | hypothetical protein SPD_2019 1999169 - 1997838 - | sensor histidine kinase SPD_2020 1999819 - 1999166 - | DNA-binding response regulator SPD_2021 2000242 - 2000108 - | hypothetical protein SPD_2022 2002893 - 2000461 - | ATP-dependent Clp protease, ATP-binding subunit ctsR 2003353 - 2002895 - | transcriptional regulator CtsR TERM 2441 2003429 - 2003466 + r 71 -3.3 -5.02439 | opp_overlap 2003431, overlap 2003431 CATTTTTAAAAGAAA AAGGGCGCTGGTAAAGG ATAA TCTTCACCAACTCCCTA TTTTTCTACTTATCT TERM 2442 2003464 - 2003431 - R 100 -9.6 -5.45802 | opp_overlap 2003429 2003431 TTTTTAAAAGAAAAA GGGCGCTGGTAAAG GATAAT CTTCACCAACTCCC TATTTTTCTACTTAT SPD_2024 2004200 - 2003472 - | ABC transporter, ATP-binding protein SPD_2025 2005207 - 2004200 - | ABC transporter, substrate-binding protein, putative TERM 2443 2004361 - 2004376 + g 71 -4 -4.90013 | gap 1, overlap 2004364 AGTATTTTTGAGATT CGATGAC AAA GTCA-CG TTTTTCCTTGAGTTC SPD_2026 2005961 - 2005245 - | ABC transporter, permease protein SPD_2027 2006256 - 2005966 - | hypothetical protein TERM 2444 2006320 - 2006299 - R 100 -7.3 -5.94743 | opp_overlap 2006273 TAAAAAAAAGAAAAA CCTTTACCA TACA TGGAAAAGG TGCAAAATTAGACTA TERM 2445 2006504 - 2006483 - R 80 -7.3 -4.52857 | ACTGCTTACAGAAAA GAGCAGGAA ATTT CTCCTACTC CAATTTTCTATACTC cbpD 2007858 - 2006512 - | choline binding protein D TERM 2446 2007831 - 2007788 - G 78 -4.1 -5.1861 | gap 1, opp_overlap 2007814 CCTACTACTAAAAAA GGAACAAGCTTTTTAACTGA CATCT TCAAGTAATAA-CTTGTTCC TCTTGCTATAAACGG TERM 2447 2007929 - 2007945 + r 81 -9.5 -3.73953 | opp_overlap 2007929 GAGAAAAAAGAAAAA GTGAGAA AAT TTCTCAC TTTAGTCAAGATAAT TERM 2448 2007945 - 2007929 - R 100 -9.5 -5.8096 | opp_overlap 2007929 GAGAAAAAAGAAAAA GTGAGAA AAT TTCTCAC TTTAGTCAAGATAAT SPD_2029 2008213 - 2007947 - | hypothetical protein dnaB 2009567 - 2008215 - | replicative DNA helicase rplI 2010063 - 2009611 - | 50S ribosomal protein L9 SPD_2032 2012033 - 2010060 - | DHH subfamily 1 protein TERM 2449 2010178 - 2010168 - G 71 -6.8 -4.05788 | TGCTGCCAAATTAAA GTGG CCT CCAC CGCCTAACTCTTCCA TERM 2450 2012152 - 2012126 - R 79 -4.6 -5.24416 | gap 1, opp_overlap 2012126 CAATTATAAGAAAAA GGTAG-TTTAC AATTCA GTAAACCTACC TTTACACATATTGAA yfiA 2012717 - 2012169 - | ribosomal subunit interface protein SPD_2034 2013459 - 2012797 - | competence protein ComF, putative SPD_2035 2014754 - 2013456 - | helicase, putative TERM 2451 2014276 - 2014264 - G 72 -3.3 -5.06816 | overlap 2014265 ATTCCGCAAGAAAAA TCCTG TTG CAGGC GCTTGTACAGCTCCA SPD_2036 2014810 - 2015445 + | hypothetical protein TERM 2452 2015670 - 2015636 - f 100 -20.4 -2.80816 | opp_overlap 2015636 2015644, overlap 2015638 2015640 2015644 CTTTGATCTATGATA TATAGAAATCCTATCG CTT CGATAGGATTTCTATA TTTTACAAATGGTAT TERM 2453 2015636 - 2015670 + F 100 -20.4 -4.12456 | opp_overlap 2015636 2015638 2015640 2015644, overlap 2015644 CTTTGATCTATGATA TATAGAAATCCTATCG CTT CGATAGGATTTCTATA TTTTACAAATGGTAT TERM 2454 2015668 - 2015638 - f 100 -18.6 -2.95298 | opp_overlap 2015636 2015644, overlap 2015636 2015640 2015644 TTGATCTATGATATA TAGAAATCCTATCG CTT CGATAGGATTTCTA TATTTTACAAATGGT TERM 2455 2015666 - 2015640 - f 100 -16.8 -3.02947 | opp_overlap 2015636 2015644, overlap 2015638 2015636 2015644 GATCTATGATATATA GAAATCCTATCG CTT CGATAGGATTTC TATATTTTACAAATG TERM 2456 2015662 - 2015644 - f 100 -11.8 -4.18367 | opp_overlap 2015636 2015644, overlap 2015640 2015638 2015636 TATGATATATAGAAA TCCTATCG CTT CGATAGGA TTTCTATATTTTACA TERM 2457 2015644 - 2015662 + F 100 -11.8 -4.33956 | opp_overlap 2015644 2015640 2015638 2015636, overlap 2015636 TATGATATATAGAAA TCCTATCG CTT CGATAGGA TTTCTATATTTTACA cysK 2015730 - 2016650 + | cysteine synthase A TERM 2458 2016679 - 2016720 + T 100 -9.7 -4.57581 | gap 1, opp_overlap 2016679 AAGTCTATTGAAAAA TCTCCAGACTAGAGAACT CACGGAT AGTTC-CTAATCTGGAGA TTTCTTATTTGCACT TERM 2459 2016720 - 2016679 - T 100 -11.9 -4.67011 | gap 1, opp_overlap 2016679 AAGTCTATTGAAAAA TCTCCAGACTAGAGAACT CACGGAT AGTTC-CTAATCTGGAGA TTTCTTATTTGCACT SPD_2038 2017116 - 2016847 - | hypothetical protein TERM 2460 2017553 - 2017520 - R 84 -8.3 -4.63928 | opp_overlap 2017524, overlap 2017524 AGATGAGTGTAAAAA GAAAGTCCTCATTTC AATA GAAATCACGACTTTC TGATGGATTTATAGT TERM 2461 2018114 - 2018129 + r 86 -6.1 -5.54338 | TCCTAAATGCACTTA GCCCT TATTAT AGGGC TTTTTGTTTTAATTA TERM 2462 2018224 - 2018208 - R 100 -10.9 -5.36441 | opp_overlap 2018208 GCCCTATACAAAAAA GGAAGCA AAT TGCTTCC TTTCTATTATTAGTT TERM 2463 2018208 - 2018224 + r 100 -10.9 -4.36774 | opp_overlap 2018208 GCCCTATACAAAAAA GGAAGCA AAT TGCTTCC TTTCTATTATTAGTT tsf 2019274 - 2018234 - | elongation factor Ts TERM 2464 2018463 - 2018484 + g 87 -5.1 -5.42265 | overlap 2018464 2018480 AAGCGGTCCATTTTA CCTGGGATA ATTT TGTCCCAGA TTTTTTCTGGTTTGC TERM 2465 2018464 - 2018483 + g 77 -8.6 -3.83732 | overlap 2018463 2018480 AGCGGTCCATTTTAC CTGGGATA ATTT TGTCCCAG ATTTTTTCTGGTTTG TERM 2466 2019331 - 2019301 - R 100 -17.6 -4.09243 | opp_overlap 2019299 2019296 TATATTTTTTGAAAA TAGGAGAGCCGGGC TAA GCCCCGCCCTCCTA GGTAATTACTATTTG rpsB 2020119 - 2019340 - | 30S ribosomal protein S2 TERM 2467 2019573 - 2019585 + g 76 -3.3 -5.23016 | opp_overlap 2019573 2019574, overlap 2019574 CAACCATCGCTACAA CTGGG ATT CCCAA TTTTTTAGCTTCTTT TERM 2468 2019711 - 2019723 + g 71 -6.3 -4.15044 | CACGTTGTTTGTTAA GAAGT GCA ACTTC TTTCTTAGGAAGAAC TERM 2469 2019878 - 2019894 + g 71 -6.5 -4.24413 | opp_overlap 2019867 CGTACTGCTTCTTCA GCAACTG CAT CAGCTGC TTGTTTCTTAGTACC TERM 2470 2020336 - 2020315 - R 74 -6.6 -4.28049 | gap 1, opp_overlap 2020313 2020317 GGTAAAACCTGAAAA GAGGG-CTC TATTC GAGTCCCTC TGTAAATTAATCTGC SPD_2043 2021521 - 2020343 - | secreted 45 kDa protein precursor TERM 2471 2020827 - 2020858 + g 74 -5 -4.82667 | gap 1, opp_overlap 2020812 GCTGCTTCTGCTACC GCAGCTGCACGAGCC TCT GCCTCA-GCTGCTGC TTTTTGCTCTAATAG TERM 2472 2021591 - 2021572 - R 86 -5 -5.59357 | opp_overlap 2021572 AGTATACCAAAAAAA GGCCTAAT AAAT ATTACGCC TTTGTTACATTTATA SPD_2044 2022109 - 2021615 - | rod shpae-determining protein MreD, putative mreC 2022927 - 2022109 - | rod shape-determining protein MreC TERM 2473 2022437 - 2022453 + g 71 -6.6 -4.08767 | opp_overlap 2022437 AGAAGGTTGACTATA GTAGAG TTCTC CTCTAC TTTTGAAACACTCCC TERM 2474 2022952 - 2022962 + r 70 -4 -4.92314 | opp_overlap 2022952 TTTATATCAAAAACT GTTA CAG TAAC TTTTTATCAATTCCT SPD_2046 2023780 - 2022986 - | cobalt ABC transporter, permease protein TERM 2475 2023523 - 2023507 - G 71 -3.7 -4.97824 | overlap 2023509 AAAACTCAAATAAAA CATTCCC ATT AGAAATG AAAAATAGTTGAAAA cbiO1 2024612 - 2023773 - | cobalt transporter ATP-binding subunit cbiO2 2025424 - 2024597 - | cobalt transporter ATP-binding subunit pgsA 2025966 - 2025421 - | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase SPD_2050 2026798 - 2025977 - | hypothetical protein SPD_2051 2028123 - 2026840 - | peptidase, M16 family protein TERM 2476 2027381 - 2027407 + g 74 -5.2 -4.71186 | ATTCTCATACTATCT GTTGGCTTTACA GGC TGTAAAAACAAC TTTTCTCTTGCTACT TERM 2477 2027433 - 2027445 + g 71 -6.3 -4.15396 | opp_overlap 2027433 2027432 CTACTTCCTGAAAAT CTGAA TCT TTCAG TTCTTTGCTTTCAAA SPD_2052 2029370 - 2028120 - | hypothetical protein TERM 2478 2028476 - 2028463 - G 71 -5.3 -4.5123 | AATCCACTAAATAAA TCAAG CTCA CTTGA AATGGTATAAGCTAA TERM 2479 2028819 - 2028804 - G 77 -6.2 -4.58663 | ATCATTGGCTAAAAA TTCTTG GAAA CAAGAA TAAGAACTTTGTGGA TERM 2480 2029311 - 2029323 + g 75 -2.7 -5.28481 | ACGCACGGTAATTTT GTTTG TTT TAAAC TTTTTTGATTGGATA SPD_2053 2029529 - 2029897 + | hypothetical protein recF 2029900 - 2030997 + | recombination protein F TERM 2481 2031043 - 2031001 - T 81 -10.1 -3.48465 | gap 1, opp_overlap 2031001 2031004, overlap 2031004 2031011 2031014 AATGGAAATTGACAA CATTGTAAAAGAACTCCTGT TTTC ACTGGAGTTCTTTT-CATTG TTTTTTACATAGAAT TERM 2482 2031001 - 2031043 + T 100 -10.1 -5.09225 | gap 1, opp_overlap 2031001 2031004 2031011 2031014, overlap 2031004 AATGGAAATTGACAA CATTGTAAAAGAACTCCTGT TTTC ACTGGAGTTCTTTT-CATTG TTTTTTACATAGAAT TERM 2483 2031040 - 2031004 - T 77 -10.4 -2.57996 | gap 1, opp_overlap 2031001 2031004, overlap 2031001 2031011 2031014 GGAAATTGACAACAT TGTAAAAGAACTCCTGT TTTC ACTGGAGTTCTTTT-CA TTGTTTTTTACATAG TERM 2484 2031004 - 2031040 + T 100 -10.4 -4.64763 | gap 1, opp_overlap 2031004 2031001 2031011 2031014, overlap 2031001 GGAAATTGACAACAT TGTAAAAGAACTCCTGT TTTC ACTGGAGTTCTTTT-CA TTGTTTTTTACATAG TERM 2485 2031034 - 2031011 - T 93 -9.6 -4.20712 | opp_overlap 2031004 2031001, overlap 2031004 2031001 2031014 GACAACATTGTAAAA GAACTCCTGT TTTC ACTGGAGTTC TTTTCATTGTTTTTT guaB 2032526 - 2031048 - | inositol-5-monophosphate dehydrogenase TERM 2486 2032100 - 2032090 - G 70 -3.2 -4.90525 | TAATCTGAAATAAAA CGAA GAT CTCG GTTTGTCAAAATACC TERM 2487 2032660 - 2032632 - R 86 -4.7 -5.63517 | opp_overlap 2032632 GGGGTAAATAAAAAA CTATCTTTTCT TCGAGAT AGAAATGATAG TTTCTTGTAAAATAA trpS 2033703 - 2032678 - | tryptophanyl-tRNA synthetase II SPD_2057 2033909 - 2035531 + | ABC transporter, ATP-binding protein TERM 2488 2035576 - 2035538 - f 81 -6.1 -5.00923 | opp_overlap 2035541 2035546, overlap 2035546 AAAGACTAAATAAAA CTTCAAAACTCAGTTGG GTTAA CCAACTGAGTTTTCTAT CATTCTACGAGGTAA TERM 2489 2035541 - 2035573 + F 85 -12.2 -2.96274 | opp_overlap 2035538 2035546, overlap 2035546 GACTAAATAAAACTT CAAAACTCAGTTGG GTTAA CCAACTGAGTTTTC TATCATTCTACGAGG TERM 2490 2035546 - 2035568 + F 100 -12.1 -4.63007 | opp_overlap 2035538 2035546, overlap 2035541 AATAAAACTTCAAAA CTCAGTTGG GTTAA CCAACTGAG TTTTCTATCATTCTA TERM 2491 2035568 - 2035546 - f 100 -12.1 -4.30559 | opp_overlap 2035546 2035541, overlap 2035538 AATAAAACTTCAAAA CTCAGTTGG GTTAA CCAACTGAG TTTTCTATCATTCTA SPD_2058 2035593 - 2038145 + | ABC transporter, permease protein, putative TERM 2492 2038150 - 2038169 + F 86 -5 -5.6473 | opp_overlap 2038150, overlap 2038143 CTAAGGCATAAAAAA TCGACC AGTTAATC GGTCGA TTTTTTTAATCTTCT TERM 2493 2038169 - 2038150 - f 82 -5.7 -5.31456 | opp_overlap 2038150 2038143 CTAAGGCATAAAAAA TCGACCA GTTAAT CGGTCGA TTTTTTTAATCTTCT TERM 2494 2039089 - 2039101 + F 82 -4.1 -5.54192 | opp_overlap 2039084, overlap 2039084 TTTATCCAAACTACC TGTCA AGG TGGCA TTTTTTTCACTTAGT TERM 2495 2039924 - 2039913 - f 77 -3 -5.5208 | opp_overlap 2039920, overlap 2039906 TTACAAGATAAAAAA TCTA TTTT TAGA CATATAGTCTAATTT TERM 2496 2040091 - 2040071 - g 74 -4.7 -4.95806 | opp_overlap 2040071 AAATTAGTAGAAAAA GCCGGAA TTAGTCG TTCCAGC TTCTATACTCACTAT SPD_2060 2039957 - 2040499 + | transcriptional regulator, TetR family protein TERM 2497 2040528 - 2040508 - T 81 -6.2 -5.01546 | gap 1, opp_overlap 2040509 2040510, overlap 2040510 AAATTGATACAAAAA GAGGAACAC AGCT GTGTTCC-C TTTTATCTATACTCC TERM 2498 2040509 - 2040528 + T 76 -6.4 -4.62984 | opp_overlap 2040508 2040510, overlap 2040510 AATTGATACAAAAAG AGGAACAC AGCT GTGTTCCC TTTTATCTATACTCC TERM 2499 2040527 - 2040510 - T 93 -9.9 -4.11744 | opp_overlap 2040509 2040510, overlap 2040508 ATTGATACAAAAAGA GGAACAC AGCT GTGTTCC CTTTTATCTATACTC TERM 2500 2040510 - 2040527 + T 81 -9.9 -3.37067 | opp_overlap 2040510 2040508, overlap 2040509 ATTGATACAAAAAGA GGAACAC AGCT GTGTTCC CTTTTATCTATACTC comE 2041494 - 2040742 - | response regulator TERM 2501 2040819 - 2040838 + g 72 -3.6 -5.10497 | opp_overlap 2040812, overlap 2040821 GACAACGATGGTCTT CATAGAAA ACAA TTTCTAAG TTTTTTCGATCAATT comD 2042816 - 2041491 - | putative sensor histidine kinase ComD comC1 2042962 - 2042837 - | competence-stimulating peptide type 1 TERM 2502 2043096 - 2043113 + r 73 -6.9 -4.00882 | opp_overlap 2043096 TTTTTTAAGAAAAAA GCCGGGA AAAT TCCCAGC TTTGCTATTATATTG TERM 2503 2043113 - 2043096 - R 100 -9.1 -5.4505 | opp_overlap 2043096 TTTTTTAAGAAAAAA GCCGGGA AAAT TCCCAGC TTTGCTATTATATTG SPD_2067 2043723 - 2043244 - | SPOUT methyltransferase superfamily protein TERM 2504 2043937 - 2043922 - g 74 -4.8 -4.77986 | opp_overlap 2043922 TGAAACATCTAAAAA CATTTT ACAA AAAATG GTTTCAATTATTAGT SPD_2068 2043906 - 2045087 + | serine protease TERM 2505 2045221 - 2045189 - g 88 -4.2 -5.77988 | AGATATACAAAAAAA TCCCTATCAACCCC GAAAA GAATTTGATAGAGA AAAACTAGATGAACT TERM 2506 2045238 - 2045226 - g 72 -3.4 -5.03994 | TTTGATAGAGAAAAA CTAG ATGAA CTAG CACAGTCTATCAAAG SPD_2069 2045145 - 2045903 + | SpoJ protein