TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.592507 %AT, 1715569 nt, 11078 terms. Intergenic: 0.657679 %AT, H2T: 333047 nt, 2225 terms; T2T: 70555 nt, 1309 terms; H2H: 66696 nt, 725 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|15902044|ref|NC_003098.1| Streptococcus pneumoniae R6, complete genome (length 2038615) dnaA 1 - 1362 + | chromosomal replication initiation protein dnaN 1521 - 2657 + | DNA polymerase III subunit beta TERM 1 2659 - 2690 + F 75 -9.6 -2.66316 | gap 1, opp_overlap 2659 2664, overlap 2664 TTCGTACAAATTAAG TGAAAGAGGTTGAGC CTG GCTC-GCCTCTTTTA TGATATAATCGGAAA TERM 2 2664 - 2685 + F 80 -7.3 -4.52047 | gap 1, opp_overlap 2664 2659, overlap 2659 ACAAATTAAGTGAAA GAGGTTGAGC CTG GCTC-GCCTC TTTTATGATATAATC spr0003 2722 - 2916 + | hypothetical protein spr0004 3000 - 4115 + | translation-associated GTPase TERM 3 4138 - 4160 + F 74 -6.3 -4.4267 | opp_overlap 4139 4154, overlap 4131 4139 TAAATGGTGTCAATT AGGTTGGAA AAAAA TTCCAACCC TTTTGGCTTTTGAAA TERM 4 4139 - 4159 + F 79 -9.8 -3.24879 | opp_overlap 4139 4154, overlap 4138 4131 AAATGGTGTCAATTA GGTTGGAA AAAAA TTCCAACC CTTTTGGCTTTTGAA TERM 5 4159 - 4139 - f 75 -9.8 -2.7186 | opp_overlap 4139 4138 4131, overlap 4154 AAATGGTGTCAATTA GGTTGGAA AAAAA TTCCAACC CTTTTGGCTTTTGAA pth 4186 - 4755 + | peptidyl-tRNA hydrolase TERM 6 5009 - 5022 + G 71 -3.8 -4.87807 | overlap 4977 TTTTGGTAGATGATG CTCC TATGGT GGAG TTTTTGATGTCTTCA TERM 7 6469 - 6459 - g 70 -5.4 -4.43911 | AAAGGCCAAGCAAAA GGTT AAG AACC AGGTAGAGGATATAG mfd 4756 - 8265 + | transcription-repair coupling factor spr0007 8323 - 8589 + | S4 domain protein spr0008 8582 - 8950 + | hypothetical protein spr0009 9001 - 10338 + | hypothetical protein TERM 8 11127 - 11145 + G 77 -8.2 -4.24002 | opp_overlap 11123 11122 CTTACAAAAGCTCAG TTTGCTGA AGT TCAGCAGA TTTTAAAATTTAAAA TERM 9 11295 - 11305 + G 74 -4 -5.04377 | CAAAATCAGGTAGCT TATC AAG GATA TTTATTTTCTTTTGG TERM 10 11497 - 11523 + G 71 -6.1 -4.14392 | gap 1, opp_overlap 11515, overlap 11486 ACTCTGCTCTTATTA TTGAG-CAATTT GGTG AAATTGTCTCAA TTTTGGGAATTGCGA spr0010 10335 - 11612 + | hypothetical protein hgt 11616 - 12158 + | hypoxanthine-guanine phosphoribosyltransferase TERM 11 12334 - 12322 - g 71 -6.3 -4.30987 | AGTTGGTACAAGAAA TTACC GAT GGTAA TGTAAAAGAATTAAC TERM 12 13203 - 13213 + G 73 -6.8 -4.25283 | GATCCTGCCCTTTTG CGTC CAG GACG TTTTGATAGAAAAGT ftsH 12174 - 14132 + | cell division protein FtsH TERM 13 14139 - 14156 + F 100 -11.3 -5.28826 | opp_overlap 14133 GAAAAATAACCCTGA GAGAGGC TGGA GCCTCTC TTTTTTGTGCAGTTT comX1 14254 - 14733 + | competence-specific global transcription modulator TERM 14 14945 - 14934 - f 77 -3 -5.52986 | ACTTGATGAAAAAAA GTTT AAAA AAAC TTAAAAATCTTCAAA TERM 15 15130 - 15116 - f 95 -8.6 -4.89605 | GAAAAAAACAATAAA TCTGTC AGT GACAGA AATGAGTAAGAACTC TERM 16 17232 - 17213 - f 91 -12.2 -3.62096 | opp_overlap 17212 17211 CGGCAGGAGGGCAAA CCGAAGAG TTTA CTCTTCGG GGTTGTAGGACTGCA TERM 17 20130 - 20143 + F 89 -6.7 -5.60689 | opp_overlap 20130 GAGTAATTGAGTTAA GAGGT TTAG ACCTC TTTTTTGTTATGTAA TERM 18 20277 - 20255 - g 72 -3.4 -5.0133 | GATTTTCGTAAAAAA GTTCTCTC TTATTGT GAGCGAAC AGGTAGTATAACAGA transposase_A 20207 - 20554 + | transposase spr0015 20751 - 20593 - | hypothetical protein TERM 19 20999 - 21045 + Gr 74 -4.6 -4.83518 | gap 1, opp_overlap 20999, overlap 20994 21002 GGCTTATATCAAAAA GAACCTC-AAAAAGGTATTAC CAAGTT GCAATACCTTTTACGAGGCTC TTTTCTCTTGTTCTT TERM 20 21045 - 20999 - gR 100 -11.2 -4.8048 | gap 1, opp_overlap 20999 20994 21002 GGCTTATATCAAAAA GAACCTCA-AAAAGGTATTAC CAAGTT GCAATACCTTTTACGAGGCTC TTTTCTCTTGTTCTT transposase_B 20733 - 21071 + | transposase IS1167-truncation 21312 - 21106 - | degenerate transposase (orf2) TERM 21 21140 - 21162 + g 90 -9.2 -5.15117 | opp_overlap 21144 GAAAGCGAAGATCTA GAAAGGACAA ATT TCGTCCTTTC TTTTTTGAAGTTTTC IS1167-truncation 21604 - 21455 - | degenerate transposase (orf2) IS1167-truncation 21851 - 21645 - | degenerate transposase (orf1) TERM 22 21965 - 21926 - H 71 -5.3 -4.50976 | TTTTATACTAGAAAA TCAGAACCATAATACCT ATATAA AAATATTATAGTTCTAA TAGGACTTACCCAAA spr0020 22162 - 22404 + | hypothetical protein TERM 23 22624 - 22611 - f 73 -8.1 -3.61244 | overlap 22613 TATGTGAGAAAGGAA GAGCC TGAG GGCTC AGACAAGATTATGAC purA 22635 - 23921 + | adenylosuccinate synthetase TERM 24 24042 - 24059 + F 100 -9.1 -5.80817 | opp_overlap 24042 TAATCTCCCTATAGA GTCACCG CATT CGGTGGC TTTTTTTGTGTTGGG spr0022 24122 - 24589 + | cytidine/deoxycytidylate deaminase family protein dut 24776 - 25219 + | deoxyuridine 5'-triphosphate nucleotidohydrolase spr0024 25158 - 25736 + | hypothetical protein radA 25849 - 27111 + | DNA repair protein RadA spr0026 27115 - 27681 + | hypothetical protein TERM 25 28114 - 28131 + G 70 -3.5 -4.87893 | GCTTTGATTCCTGTG CGAAAAT TAAA ATTTTTG TTTTTACTTGGAATT spr0027 27706 - 28365 + | hypothetical protein TERM 26 28512 - 28536 + F 74 -3.5 -5.34655 | opp_overlap 28515, overlap 28515 TTCAAAAGAATGATG CAAGGGTACAA ATA TGGTGCCCTTC TTTTATTTTTGATTG TERM 27 28515 - 28533 + F 74 -5.2 -4.70511 | opp_overlap 28515, overlap 28512 AAAAGAATGATGCAA GGGTACAA ATA TGGTGCCC TTCTTTTATTTTTGA prsA 28583 - 29602 + | ribose-phosphate pyrophosphokinase TERM 28 29628 - 29611 - T 75 -9.9 -2.56908 | opp_overlap 29611, overlap 29610 AATTTAATGACCAAG CCTGAGA TGAT TCTCAGG TTTTTCGTCTTTTTT TERM 29 29611 - 29628 + T 100 -9.9 -5.04265 | opp_overlap 29610 29611 AATTTAATGACCAAG CCTGAGA TGAT TCTCAGG TTTTTCGTCTTTTTT IS1167-truncation 30016 - 29624 - | degenerate transposase (orf1) TERM 30 30140 - 30088 - R 100 -16 -4.52589 | gap 1, opp_overlap 30089 30090, overlap 30090 TTTTTCTACACAAAA TAGGCTCCATAATATCCATAGGG GATTTACT CACTATGGATATTATGGAGCC-A TTTTACAACAGTGCC TERM 31 30089 - 30140 + r 100 -19.1 -4.08767 | gap 1, opp_overlap 30088 30090, overlap 30090 TTTTCTACACAAAAT AGGCTCCATAATATCCATAG-GGG ATTTA CTCACTATGGATATTATGGAGCCA TTTTACAACAGTGCC TERM 32 30139 - 30090 - R 100 -21.1 -3.87627 | opp_overlap 30089 30090, overlap 30088 TTTCTACACAAAATA GGCTCCATAATATCCATAGGG GATTTACT CACTATGGATATTATGGAGCC ATTTTACAACAGTGC TERM 33 30090 - 30139 + r 100 -22.6 -3.05046 | gap 1, opp_overlap 30090 30088, overlap 30089 TTTCTACACAAAATA GGCTCCATAATATCCATAG-GGG ATTTA CTCACTATGGATATTATGGAGCC ATTTTACAACAGTGC spr0030 30481 - 30143 - | hypothetical protein TERM 34 30540 - 30556 + r 74 -6.6 -4.36931 | opp_overlap 30539 TTAATTCCAAGAATG CCATCT TAACC AGATGG TTTTCCTGTCCATTG spr0031 31053 - 30700 - | hypothetical protein TERM 35 32991 - 33005 + G 82 -11.4 -3.15841 | overlap 32989 AGCAGTGGATGTTTT GGAGCG TCT CGCTCC TATTGCTCCGATTGT polA 31306 - 33939 + | DNA polymerase I TERM 36 33943 - 33957 + F 80 -4.9 -5.31275 | opp_overlap 33937 33943 GAGGCTAAATAAAAA GGGGG CTAGT CCTCC TTTTTTGTAGTAGAA TERM 37 33957 - 33943 - f 72 -2.7 -5.28942 | opp_overlap 33943, overlap 33937 GAGGCTAAATAAAAA GGGGG CTAGT CCTCC TTTTTTGTAGTAGAA spr0033 34024 - 34461 + | hypothetical protein TERM 38 34485 - 34468 - T 89 -7 -5.24416 | opp_overlap 34463 34468 GAAGCATAAGAAAAA GGTAGC TGATGG GCTACC TTTTGTGTTATACTC TERM 39 34468 - 34485 + T 83 -7.7 -4.75289 | opp_overlap 34468, overlap 34463 GAAGCATAAGAAAAA GGTAGCT GATG GGCTACC TTTTGTGTTATACTC TERM 40 34595 - 34583 - T 71 -7.7 -3.58905 | AGGTTGCAGATAGAA CTGAC GAA GTCAG TAACATATATACGGC spr0034 35674 - 34652 - | hypothetical protein aspC 35811 - 36980 + | aromatic amino acid aminotransferase TERM 41 37455 - 37468 + G 70 -3.1 -4.89521 | TCTGCCATCGGGTTG GTCAG GCTT TTGAC TTTTCTTTCAAATAT recO 36977 - 37747 + | DNA repair protein RecO TERM 42 37992 - 37974 - g 87 -6 -5.29445 | TCGGAATAAGAAAAA TGCCAGTA TGG TATTGGCA GCCAAGGCTGTCAAA plsX 37744 - 38736 + | putative glycerol-3-phosphate acyltransferase PlsX acpP 38742 - 38975 + | acyl carrier protein, putative TERM 43 39253 - 39211 - g 85 -7.2 -4.98531 | overlap 39205 39245 TTGCCAAAGTAAAAA CGTTTAAAATGTTTTCAACA ACC TATCGAAATCATCGTAAACG CTTCGGATTACGAAT IS1381-truncation 39018 - 39311 + | degenerate transposase (orf2) thmA 39514 - 39744 + | amphipathic pore-forming peptide precursor TERM 44 39861 - 39850 - T 70 -4.4 -4.77165 | CTTCGGAGAAGAAAA CAGA AAAA TCTG TTAAAAAATAATCAA TERM 45 40159 - 40182 + T 100 -9.6 -5.10077 | overlap 40161 ATAGCATATTTTTAG TGGGCAGGAC TCTT GTTCTGCCTA TTTTTTCGGCTCTTT TERM 46 40161 - 40180 + T 93 -10 -4.16351 | overlap 40159 AGCATATTTTTAGTG GGCAGGAC TCTT GTTCTGCC TATTTTTTCGGCTCT TERM 47 40234 - 40256 + T 100 -13.6 -5.27779 | opp_overlap 40238 AAAAGCTAAGCTCGA GAAAGGACAA ATT TTGTCCTTTC TTTTTTGATATTCAG TERM 48 40252 - 40238 - T 79 -8.6 -3.89614 | opp_overlap 40234 GCTAAGCTCGAGAAA GGACAA ATT TTGTCC TTTCTTTTTTGATAT IS1167 40991 - 40224 - | transposase TERM 49 40623 - 40642 + g 70 -9.4 -2.64981 | opp_overlap 40621 CATACGAAAAGTAGG GCGATAAA AATG TTTATCGC TGAGTTTACGACTAT IS1167 41500 - 40982 - | transposase TERM 50 41625 - 41573 - H 73 -4.5 -4.96848 | overlap 41575 TTTTCTACACAAAAA TAGGCTCCATAATATCCATAG-GGG ATTTA CCCACTACAAATATTATAGAACC-A TTTTTTTATCCAAAA TERM 51 41624 - 41575 - H 93 -9.6 -4.11141 | gap 1, overlap 41573 TTCTACACAAAAATA GGCTCCATAATATCCATAG-GGG ATTTA CCCACTACAAATATTATAGAACC ATTTTTTTATCCAAA TERM 52 41834 - 41816 - H 78 -10.4 -2.61383 | overlap 41815 AGTCCTATCTACAAC CTCAAAAC AGT GTTTTGAG CAGCCTGCGGCTAGT comA 41902 - 44055 + | competence factor transporting ATP-binding/permease protein ComA comB 44068 - 45417 + | competence factor transport protein ComB TERM 53 45451 - 45474 + F 84 -3.9 -5.64421 | TAAATAATTTTTAAA CTGTGAGAA AGATTC TTCTTGCAG TTTTTTCTTTACAAT purC 45545 - 46294 + | phosphoribosylaminoimidazole-succinocarboxamide synthase TERM 54 46375 - 46336 - f 70 -8 -3.18268 | gap 1, opp_overlap 46342 46349, overlap 46349 TCTCAACTAAAAGGA CT-CAGGCTGAAAAGGTCC CCC AGACCTTTTCACTCTGTAG AGAACTAGGTGAACT TERM 55 47817 - 47807 - g 79 -6.8 -4.56597 | opp_overlap 47807 47816 47816, overlap 47816 GTTGTCCGTGAAAAA CCTG AAG CAGG TGATGTGATCATCCT TERM 56 49425 - 49414 - g 74 -4.4 -4.96468 | opp_overlap 49414 TAAAGCCAAAGAAAA GGTT GAAA AACC TGTGGTTTACATCCC purL 46493 - 50221 + | phosphoribosylformylglycinamidine synthase, putative purF 50314 - 51756 + | amidophosphoribosyltransferase purM 51793 - 52815 + | phosphoribosylaminoimidazole synthetase purN 52812 - 53357 + | phosphoribosylglycinamide formyltransferase vanZ 53441 - 53950 + | vanZ protein, putative purH 53954 - 55522 + | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase TERM 57 55533 - 55554 + F 90 -8.1 -5.15969 | opp_overlap 55533 55528 ATTAAGAAGATAAAA GGGAAGAAA ACAG TTTCTTTCC TTTTTTGGCTTAAAA TERM 58 55554 - 55533 - f 77 -5.9 -4.80656 | opp_overlap 55533, overlap 55528 ATTAAGAAGATAAAA GGGAAGAAA ACAG TTTCTTTCC TTTTTTGGCTTAAAA TERM 59 56872 - 56857 - g 91 -6.2 -5.46657 | TATCCCAACAAAAAA TAGAAG GACT CTTCTA CCGAACAGATATCGG purD 55644 - 56906 + | phosphoribosylamine--glycine ligase TERM 60 56989 - 56965 - f 100 -13 -4.07568 | TCGTCGTGGTGAAAA GACCAGAACA GTGAA TGTTCTGGTC AGGGGGAAACTTGGA TERM 61 57196 - 57169 - f 100 -15.8 -3.53091 | opp_overlap 57175, overlap 57172 ACCGCCGTTGTGAAA GAACGATTGGAT GATA ATCCAATCGTTC AGGGAAATTGGAAGA TERM 62 57193 - 57172 - f 93 -11.7 -3.90744 | opp_overlap 57175, overlap 57169 GCCGTTGTGAAAGAA CGATTGGAT GATA ATCCAATCG TTCAGGGAAATTGGA purE 57276 - 57797 + | phosphoribosylaminoimidazole carboxylase catalytic subunit TERM 63 57816 - 57844 + GF 79 -8.1 -4.04318 | AATCGGAATTATCGG TGGCGGTCAACTG GGT CAGATGATGGCCA TTTCTGCTATCTACA purK 57724 - 58875 + | phosphoribosylaminoimidazole carboxylase ATPase subunit spr0055 58885 - 59112 + | hypothetical protein purB 59175 - 60473 + | adenylosuccinate lyase TERM 64 60510 - 60482 - T 100 -13.3 -5.30155 | opp_overlap 60482 TGATTAATTAAAAAA TAAACAGCGAGCT TCA ATCTCGCTGTTTA TTTTTTATCGAAAAG TERM 65 60482 - 60510 + T 100 -13.3 -5.24129 | opp_overlap 60482 TGATTAATTAAAAAA TAAACAGCGAGCT TCA ATCTCGCTGTTTA TTTTTTATCGAAAAG strH 64466 - 60528 - | beta-N-acetylhexosaminidase TERM 66 60610 - 60626 + g 87 -5.1 -5.47431 | overlap 60611 TCTGCAGAATCGTGA GTTCCTG TTT CAGGAAG TTTTTTCTCTGTTAC TERM 67 60611 - 60625 + g 77 -8.6 -3.86832 | overlap 60610 CTGCAGAATCGTGAG TTCCTG TTT CAGGAA GTTTTTTCTCTGTTA TERM 68 61198 - 61221 + g 76 -4.6 -5.12172 | GCTGTGATAATATTT TCCTGACC AGCTGGGA GGTTAGGA TTTTCTTTCTTGATA TERM 69 61385 - 61397 + g 77 -7.7 -4.20918 | TGGCTACAAGTGTGT CAAGC TCA GCTTG TTTATTACGGTTGAG TERM 70 64418 - 64451 + g 71 -3.9 -4.946 | opp_overlap 64406 64411 64438, overlap 64411 64421 64437 64438 GAACAGAAGCTGCTC CTACAGCGTATTT ACGAATAG AAAAACGCTGTTG TTTTTCATGTTTCAT TERM 71 64780 - 64746 - R 80 -10.2 -3.04443 | gap 1, opp_overlap 64746 64752, overlap 64752 GGTATAATAAGCATA GAA-AAAGCCCGAGC GATTAG GCTCAGGCTTTCTTC TTAGTGATCACGGTC TERM 72 64746 - 64780 + r 70 -8 -3.21416 | gap 1, opp_overlap 64746 64752, overlap 64752 GGTATAATAAGCATA GAA-AAAGCCCGAGC GATTAG GCTCAGGCTTTCTTC TTAGTGATCACGGTC TERM 73 64752 - 64773 + r 80 -7.2 -4.49316 | opp_overlap 64752 64746, overlap 64746 ATAAGCATAGAAAAA GCCCGAGC GATTAG GCTCAGGC TTTCTTCTTAGTGAT TERM 74 64773 - 64752 - R 100 -9.4 -5.05079 | opp_overlap 64746 64752, overlap 64746 ATAAGCATAGAAAAA GCCCGAGC GATTAG GCTCAGGC TTTCTTCTTAGTGAT spr0058 65539 - 64781 - | hypothetical protein bgaC 65845 - 67632 + | Beta-galactosidase 3 TERM 75 68022 - 68006 - g 71 -9.5 -2.9062 | overlap 68003 68015 CGTAGTAGACAAGGA TGTGGAA GAC TTCCACA AACTGGCAGAAAAAG PTS-EIIB 67629 - 68105 + | PTS system, IIB component PTS-EIIC 68133 - 69038 + | PTS system, IIC component PTS-EIID 69010 - 69840 + | PTS system, IID component PTS-EII 69847 - 70251 + | PTS system, IIA component agaS 70549 - 71715 + | sugar isomerase domain protein AgaS galM 71831 - 72868 + | aldose 1-epimerase TERM 76 72904 - 72941 + F 70 -4.3 -4.78237 | overlap 72940 TTAAAATTAAAATAA CGCATATTGTCAGGT GATGAAAA GTTTGATAATATGCG TTTTATTATGAAATG spr0066 73075 - 73929 + | hypothetical protein spr0067 74079 - 74336 + | hypothetical protein TERM 77 74511 - 74457 - f 100 -29.1 -3.67296 | TATCAGGTATTGAAA TGTACTGCCCCCCAAAAGTTAGA TTCTTTCTG TCTAACTTTTGGGGGGCAGTACA TAAAAACCTTGATAG TERM 78 74654 - 74636 - f 78 -10.4 -2.61383 | opp_overlap 74635, overlap 74635 74645 AGTTCTATCCACAAC CTCAAAAC AGT GTTTTGAG CTGACTTCGTCAGTT TERM 79 75258 - 75272 + F 72 -5 -4.7373 | overlap 75259 TCATCAGCTTCCTCC TTGACA CTT TGTCAG TTTTTGATACAATAG spr0068 75311 - 76075 + | hypothetical protein TERM 80 76338 - 76350 + F 71 -7.7 -3.58905 | CCGTATAGATGTGTA CTGAC TTC GTCAG TTCTATCTGCAACCT TERM 81 76427 - 76409 - f 78 -10.4 -2.61383 | overlap 76408 AGTTCTATCCACAAC CTCAAAAC AGT GTTTTGAG CAACCTGTGACTAGC TERM 82 76497 - 76485 - f 83 -6.3 -4.93365 | overlap 76491 GCCTATAATCAAAAA GAGAA ATT TTCTC CTGAAAAGCATATAG spr0069 76547 - 76705 + | hypothetical protein trkH 76686 - 78065 + | Trk transporter membrane-spanning protein - K+ transport trkA 78058 - 78744 + | Trk transporter NAD+ binding protein - K+ transport TERM 83 78760 - 78746 - Tf 71 -7.8 -3.61268 | opp_overlap 78746 CATTGAATTCGTAAA GAGGGA TGA CCCCTC TTTTTTGATGCCTAA TERM 84 78746 - 78760 + TF 88 -7.1 -5.1675 | opp_overlap 78746 CATTGAATTCGTAAA GAGGG ATGAC CCCTC TTTTTTGATGCCTAA TERM 85 78964 - 78952 - Tf 71 -7.7 -3.58905 | AGGTTGCAGATAGAA CTGAC GAA GTCAG TAACATCTATACGGC spr0073 80040 - 79471 - | hypothetical protein spr0072 79054 - 79593 + | hypothetical protein spr0074 79660 - 80070 + | hypothetical protein TERM 86 80090 - 80123 + FH 73 -4.1 -4.98531 | gap 1, opp_overlap 80098, overlap 80084 80094 80095 AGTGTTTTATAAGAG GGATTTAAGAAAAATT TTA ACTTTTTCTTA-GTCC TTTTTAATTTCAGGA TERM 87 80896 - 80882 - g 73 -7.2 -3.99986 | TTAACAAAAGGGAAA TACTTC TAT GAAGTA GACTTAAATGGCAAT spr0075 80186 - 83671 + | cell wall surface anchor family protein TERM 88 83816 - 83787 - f 74 -2.2 -5.4593 | opp_overlap 83787 83789, overlap 83789 83804 GTAAAACAATAAAAA TAGTGTTATACT TAAAGC AGTATAGCACTG TTTTTATCAAAGGAG TERM 89 83787 - 83816 + F 80 -6.6 -4.82901 | opp_overlap 83787 83789 83804, overlap 83789 GTAAAACAATAAAAA TAGTGTTATACT TAAAGC AGTATAGCACTG TTTTTATCAAAGGAG TERM 90 83789 - 83814 + F 73 -7 -4.03995 | opp_overlap 83789 83787 83804, overlap 83787 AAAACAATAAAAATA GTGTTATACT TAAAGC AGTATAGCAC TGTTTTTATCAAAGG rr08 83838 - 84536 + | DNA-binding response regulator TERM 91 84582 - 84596 + G 79 -5 -5.09173 | TTATTTCAACCCTCT TAACCA TTT TGGTTG TTTTTTGGGCTGTTC hk08 84533 - 85585 + | sensor histidine kinase TERM 92 86010 - 85981 - g 78 -7.3 -4.42748 | GTAGGTGAAAAACAA TTCCGTAACTTGT TCGT ACAAGCTACAAAA ATCAAAGGCGGAATC rpsD 85780 - 86391 + | 30S ribosomal protein S4 TERM 93 86433 - 86459 + F 87 -6.5 -5.4387 | opp_overlap 86433 AGGCCTTGATATTAA GCACTTTGGGA CGTTC TCCCTTAGTGC TTTTTTGATTTCTCT TERM 94 86629 - 86607 - g 72 -3.4 -5.0133 | GATTTTCGTAAAAAA GTTCTCTC TTATTGT GAGCGAAC AGGTAGTATAACAGA transposase_A 86559 - 86735 + | degenerative transposase spr0080 87044 - 87313 + | hypothetical protein TERM 95 87544 - 87503 - f 100 -9.7 -4.88711 | gap 1, opp_overlap 87503 ATAACATATTAAAAA TCTCCAGATTA-GGAACT ATCTCTG AGTTCCCTAGTCTGGAGA TTTTTCAGTATACCC TERM 96 87503 - 87544 + F 100 -11.9 -4.70659 | gap 1, opp_overlap 87503 ATAACATATTAAAAA TCTCCAGATTA-GGAACT ATCTCTG AGTTCCCTAGTCTGGAGA TTTTTCAGTATACCC ABC-MSP 87777 - 88736 + | ABC transporter permease ABC-MSP 88750 - 89673 + | ABC transporter permease TERM 97 89832 - 89812 - f 72 -8.3 -3.35996 | overlap 89813 89819 CAGTCTTATCTACAA CCTCAAAGC AGT GCTTTGAGC AGCCTGCGGCTAGTT TERM 98 89831 - 89813 - f 84 -11.8 -2.61383 | overlap 89812 89819 AGTCTTATCTACAAC CTCAAAGC AGT GCTTTGAG CAGCCTGCGGCTAGT ABC-SBP 89862 - 91406 + | ABC transporter substrate-binding protein TERM 99 91455 - 91492 + F 100 -13.5 -5.40072 | opp_overlap 91455 91456, overlap 91456 CTCCTAAAATAAGAA TCACTGCTTTCCTCAGG TTGG TCTGGGGAGGGCAGTGG TTTTTTTGGCACAAG TERM 100 91456 - 91491 + F 100 -14.8 -3.83561 | opp_overlap 91456 91455, overlap 91455 TCCTAAAATAAGAAT CACTGCTTTCCTCAGG TTGG TCTGGGGAGGGCAGTG GTTTTTTTGGCACAA TERM 101 91504 - 91523 + F 72 -5 -4.76193 | opp_overlap 91507, overlap 91507 GTGGTTTTTTTGGCA CAAGGATA TAGA TATCCATG TTTTCTCTTGTCCTT TERM 102 91790 - 91776 - gf 83 -11.4 -2.70525 | opp_overlap 91776, overlap 91775 TTTCTGTAAATCAAT CGGCCT TAA AGGCCG TATCCTAGTCGCTGA TERM 103 91776 - 91790 + GF 83 -11.4 -2.83164 | opp_overlap 91776 91775 TTTCTGTAAATCAAT CGGCCT TAA AGGCCG TATCCTAGTCGCTGA spr0084 91678 - 92664 + | hypothetical protein TERM 104 92672 - 92687 + GT 85 -6.8 -5.06585 | opp_overlap 92672 CTGTATAAGATCAAA CAGTCC TCAG GGGCTG TTTTTCTATGCTTTG spr0085 92633 - 93646 + | hypothetical protein TERM 105 93654 - 93671 + T 88 -7.7 -5.0538 | opp_overlap 93654 AAAAGTAAAGCAGAA GCAGGTC AATC GACTTGC TTTTTTGACATAGAA TERM 106 93710 - 93691 - T 95 -8.6 -5.4251 | opp_overlap 93691 TTGACATAGAAAAAA TCCTGCCA AGGA TGACAGGA TTGAATTTTAAAGAA spr0086 94782 - 93718 - | hypothetical protein spr0087 95807 - 94845 - | hypothetical protein spr0088 96342 - 95749 - | hypothetical protein spr0089 96655 - 96329 - | hypothetical protein TERM 107 96792 - 96773 - R 93 -7.2 -5.4251 | opp_overlap 96773 TTTATATATAAAAAA CTTCTAGC TAAA ACTAGAAG TTTAAAGGATCTTAT spr0090 97960 - 96794 - | transporter, putative spr0091 98018 - 99175 + | hypothetical protein TERM 108 99475 - 99489 + G 75 -2.9 -5.22312 | TACAGCAAGATTACG GATTT CATGA AAATC TTTTTTGGTGTGACT capD 99217 - 101067 + | CapD protein, required for the biosynthesis of type 1 capsular polysaccharide TERM 109 101073 - 101119 + T 100 -15.5 -3.494 | opp_overlap 101078, overlap 101078 CATTGAATAAAAAAG AAAAACGCATATTACCAAGTT AAACA ACCTTGGTAATATGCGTTTTA TTATGTAGAGACTTA TERM 110 101078 - 101114 + T 100 -15.4 -4.84311 | opp_overlap 101078, overlap 101073 AATAAAAAAGAAAAA CGCATATTACCAAGTT AAACA ACCTTGGTAATATGCG TTTTATTATGTAGAG TERM 111 101114 - 101078 - T 100 -15.4 -5.84011 | opp_overlap 101078 101073 AATAAAAAAGAAAAA CGCATATTACCAAGTT AAACA ACCTTGGTAATATGCG TTTTATTATGTAGAG gph 102095 - 101463 - | phosphoglycolate phosphatase sdaA 102989 - 102117 - | L-serine dehydratase, iron-sulfur-dependent, alpha subunit sdaB 103669 - 102998 - | L-serine dehydratase, iron-sulfur-dependent, beta subunit TERM 112 104268 - 104254 - g 73 -8.6 -3.79043 | overlap 104249 104248 CAGTAGTAAGTGAAA CAGTTG TTT CAACTG TAAGCGGATCTGAAG spr0096 103911 - 104414 + | LysM domain protein TERM 113 104443 - 104461 + T 93 -8.1 -5.5762 | opp_overlap 104441 104443 AATAATATGTAAAGA GTCGAGG AAATC CCTCGGC TTTTTTATCTTTCCT TERM 114 104542 - 104565 + T 84 -11.8 -2.65532 | overlap 104537 GTTTCCTCGGTTAGC TCCAGAAGGG AGAA CCCTTTTGGA TAAGTTTAGAATCGT spr0097 104785 - 104537 - | hypothetical protein spr0098 105242 - 105490 + | bacteriocin, putative TERM 115 105524 - 105497 - f 81 -7.6 -4.42238 | opp_overlap 105499, overlap 105498 105499 GGATTTTAATTAAAA TTCTCCCTCCCC TTTT GGAGAGGGAGTT TCTTCACGGGAGGTA TERM 116 105523 - 105498 - f 86 -11.1 -3.2486 | opp_overlap 105499, overlap 105497 105499 GATTTTAATTAAAAT TCTCCCTCCCC TTTT GGAGAGGGAGT TTCTTCACGGGAGGT TERM 117 105522 - 105499 - f 95 -14.6 -2.54434 | opp_overlap 105499, overlap 105498 105497 ATTTTAATTAAAATT CTCCCTCCCC TTTT GGAGAGGGAG TTTCTTCACGGGAGG TERM 118 105499 - 105522 + F 100 -12.4 -4.15044 | opp_overlap 105498 105497 105499 ATTTTAATTAAAATT CTCCCTCCCC TTTT GGAGAGGGAG TTTCTTCACGGGAGG TERM 119 106390 - 106400 + G 73 -6.8 -4.31166 | overlap 106388 GTTGTCTCATTTTTT GCTG TTG CAGC TTTATCTCTTTATCA ABC-MSP 105545 - 107653 + | ABC transporter membrane-spanning permease - amino acid transport ABC-NBD 107650 - 108291 + | amino acid ABC transporter ATP-binding protein TERM 120 108357 - 108389 + F 91 -4.4 -5.95539 | gap 2 AATAGCATAAATACG CCTAGGAATG--ACAT TTT ATGTAGCATTTCTAGG TTTTTTTGTTTCAAA ABC-SBP 108506 - 109303 + | amino acid ABC transporter periplasmic amino acid-binding protein argG 109269 - 110516 + | argininosuccinate synthase argH 110545 - 111936 + | argininosuccinate lyase TERM 121 112202 - 112220 + T 93 -8.1 -5.5762 | opp_overlap 112200 112202 AATAATATGTAAAGA GTCGAGG AAATC CCTCGGC TTTTTTATCTTTCCT spr0104 113124 - 112225 - | hypothetical protein Transporter-truncation 113542 - 113775 + | transporter, truncation Transporter-truncation 113839 - 115773 + | transporter, truncation spr0107 115766 - 116233 + | hypothetical protein spr0108 116230 - 117582 + | hypothetical protein TERM 122 117921 - 117911 - g 83 -3.2 -5.626 | TATGCGATAAAAAAA GCTA TCT CAGC TAATAGAGGGGCTAT spr0109 117728 - 118108 + | hypothetical protein TERM 123 118345 - 118367 + T 93 -9.2 -4.3953 | opp_overlap 118342 118345 TGTATTTAAAAACAA GAGGTTGGTA GAT TATCAGCCTC TTTCTTGTCGTTGAA TERM 124 118588 - 118606 + T 93 -8.1 -5.5762 | opp_overlap 118586 118588 AATAATATGTAAAGA GTCGAGG AAATC CCTCGGC TTTTTTATCTTTCCT spr0110 118931 - 118611 - | hypothetical protein spr0111 119688 - 120059 + | hypothetical protein spr0112 120067 - 120279 + | hypothetical protein TERM 125 120373 - 120357 - f 70 -3.7 -5.0133 | GAGGTTGGGAAAAAA CTCAATT TGA AAGTGAG ATTGAGTAAATCTTT TERM 126 121161 - 121171 + G 70 -3.2 -4.90455 | TTTTCCATTGATTGA TTCC AAG GGGA TTTTTGTAAGTATAT spr0113 121084 - 122142 + | hypothetical protein spr0114 122441 - 123433 + | hypothetical protein spr0115 123810 - 124184 + | hypothetical protein spr0116 124191 - 124373 + | hypothetical protein spr0117 124392 - 125294 + | hypothetical protein TERM 127 125330 - 125318 - gf 72 -4.9 -4.65933 | TATTTGTAAAACAAA TGAAA CAA TTTCA ACTAAGGAGGAGAAA spr0118 125317 - 125703 + | hypothetical protein TERM 128 125932 - 125944 + GF 75 -2.7 -5.1925 | overlap 125933 TTTTAATCAATAAGT TTTTC CCA GAAAG TTTTTTGACTTATAC spr0119 125670 - 126428 + | hypothetical protein TERM 129 126711 - 126741 + F 77 -9.3 -3.15257 | gap 1, opp_overlap 126684 126682 126734, overlap 126677 126709 126715 126719 TGAAAACATTTATTT TATG-GCAATTCTA AGCT TAGAATTGCTCATA TATATGTATTTGAGC TERM 130 126715 - 126736 + F 78 -10.3 -2.75713 | opp_overlap 126684 126682 126734, overlap 126677 126711 126709 126719 AACATTTATTTTATG GCAATTCTA AGCT TAGAATTGC TCATATATATGTATT TERM 131 127139 - 127161 + F 74 -6.3 -4.3953 | overlap 127159 CTGTATCTAAAAACA GAGGTTGGT CGATT ATCAGCCTC TTTCTTGTCGTTGAA TERM 132 127653 - 127663 + G 71 -4 -4.88407 | AAGTATTTAGAGACT TTCA AAG TGAA TTTTTGCTTGACTGA TERM 133 127753 - 127737 - g 70 -3.6 -4.90778 | opp_overlap 127737 GCTAGTCAAACAAAA CCTGCT ATTCA AGCTGG TGTTTTTATTTTAGA spr0120 127503 - 127802 + | hypothetical protein TERM 134 128074 - 128091 + F 100 -9.1 -5.72254 | GCTATAAAGATTGTC CGCAGGC TTAA GCTTGCG TTTTTTGTTGTTTAA pspA 128356 - 130215 + | surface protein pspA precursor TERM 135 130350 - 130396 + F 79 -5.3 -5.14682 | opp_overlap 130337, overlap 130345 ATGTCATTAAAAAAA CGACTCCTTTTCTCTAACTTG AAAAA TAGATTAGAGAAAATGGGTTG TTTTATTTATTATAG trmU 130562 - 131737 + | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase TERM 136 132047 - 132029 - g 75 -3 -5.29385 | overlap 132036 AAGTTAACGAAAAAA CGGAAGAC GCG GTAGTCCG TGAAGTGAGGGAAGA TERM 137 132305 - 132281 - g 71 -4.9 -4.57073 | overlap 132283 132294 CAGCCTTTTTAAAAA CAGCCCTACCA GAT TGGGAAGGCCA ACTAAGACACATTCA TERM 138 132303 - 132283 - g 71 -7.5 -3.90048 | overlap 132281 132294 GCCTTTTTAAAAACA GCCCTACCA GAT TGGGAAGGC CAACTAAGACACATT spr0123 131851 - 132333 + | MutT/nudix family protein gidA 132343 - 134256 + | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA TERM 139 134284 - 134300 + T 77 -9.5 -3.2614 | opp_overlap 134279 TTCTTACGAATGAGT TCAAAGC TTG GCTTTGA TTCATCTCCAACCTC TERM 140 134416 - 134445 + T 87 -11.5 -3.25072 | opp_overlap 134421, overlap 134421 AAAGAAAGCATAGAG AAAAACAGCTCCG AAGA CGGGGCTGTTTTG TTGACTTGTACTCAA TERM 141 134421 - 134440 + T 100 -11.4 -4.73635 | opp_overlap 134421, overlap 134416 AAGCATAGAGAAAAA CAGCTCCG AAGA CGGGGCTG TTTTGTTGACTTGTA TERM 142 134440 - 134421 - T 100 -9.2 -5.06505 | opp_overlap 134421 134416 AAGCATAGAGAAAAA CAGCTCCG AAGA CGGGGCTG TTTTGTTGACTTGTA TERM 143 134548 - 134530 - T 76 -9.6 -2.87931 | opp_overlap 134545 134546, overlap 134533 134545 TTGAGGTTGTAGATA GAACTGAC GAA GTCAGCTC AAAACACAGTTTTGA TERM 144 134545 - 134533 - T 71 -7.7 -3.58905 | overlap 134530 AGGTTGTAGATAGAA CTGAC GAA GTCAG CTCAAAACACAGTTT TERM 145 134546 - 134564 + T 78 -10.4 -2.61383 | opp_overlap 134530 134545, overlap 134545 AACTGACGAAGTCAG CTCAAAAC ACA GTTTTGAG GTTGTGGATAGAACT spr0125 136468 - 134636 - | hypothetical protein TERM 146 134932 - 134944 + gT 71 -7.7 -3.53444 | opp_overlap 134932 134919 CACCGTCTTCAGATA GATCG CGA CGATC TTTGAGGACAGCTGC TERM 147 135109 - 135121 + gT 84 -7.7 -4.66609 | overlap 135100 CAGTATCCACTGCTA GTCCA GCG TGGAC TTTTTGCATGCGGTA spr0126 136550 - 136317 - | hypothetical protein TERM 148 137140 - 137111 - R 78 -7.1 -4.371 | opp_overlap 137111 137105 137113, overlap 137112 137113 TTTACGACACGAAAA TTCCACCCCATCT ATCA AGATGAGGTGGTC TTTGCATTTTTCTAA TERM 149 137139 - 137112 - R 83 -10.6 -3.21778 | opp_overlap 137111 137105 137113, overlap 137111 137113 TTACGACACGAAAAT TCCACCCCATCT ATCA AGATGAGGTGGT CTTTGCATTTTTCTA TERM 150 137138 - 137113 - R 93 -14.1 -2.52585 | opp_overlap 137113 137111 137105, overlap 137112 137111 TACGACACGAAAATT CCACCCCATCT ATCA AGATGAGGTGG TCTTTGCATTTTTCT TERM 151 137113 - 137138 + r 91 -11.9 -3.59063 | opp_overlap 137112 137111 137113, overlap 137111 137105 TACGACACGAAAATT CCACCCCATCT ATCA AGATGAGGTGG TCTTTGCATTTTTCT orf51 137520 - 137368 - | hypothetical protein spr0128 137707 - 137522 - | hypothetical protein TERM 152 137688 - 137678 - G 74 -4 -5.02439 | AGATAAGGATAAAAA TTGA TTG TCAA GAATGTCAAAATTTG TERM 153 138277 - 138294 + G 71 -7 -4.08945 | TGCCAAACCTGTCAT GGCAGA AGCACA TCTGCC TTTTGAGCGAGTCAT spr0129 137885 - 138568 + | hypothetical protein rimI 138565 - 139002 + | ribosomal protein alanine acetyltransferase gcp 138992 - 140002 + | O-sialoglycoprotein endopeptidase TERM 154 140052 - 140074 + T 100 -15 -5.27779 | opp_overlap 140045 AAAAGCTACAATCTG GAGAGTACGA AAT TCGTACTCTC TTTTTTGATGTTCAA IS1167-truncation 140428 - 140042 - | degenerate transposase (orf2) TERM 155 140254 - 140244 - G 72 -3.2 -5.02074 | CTATCTCTTAAAAAA GTCC AAA AGAC CGTTTGAAAAAGCGG IS1167-truncation 140970 - 140419 - | degenerate transposase (orf2) TERM 156 140506 - 140490 - G 83 -10.9 -3.72576 | opp_overlap 140490 TCCTGGCGTAGTAAA TCAGTCC AGT GGACTGA TTTAGCCCGAGCCTA TERM 157 140490 - 140506 + g 82 -10.9 -3.53224 | opp_overlap 140490 TCCTGGCGTAGTAAA TCAGTCC AGT GGACTGA TTTAGCCCGAGCCTA TERM 158 140559 - 140548 - G 73 -7.2 -4.08767 | GCGAGGGTTCCAAAA GCGC TTGA GCGC CCGATACTCCAAGGA TERM 159 141458 - 141407 - R 100 -14.6 -4.30719 | opp_overlap 141388 141418, overlap 141408 TTTTTCTACAAGAAA CGACCCTATAATTCCTGGGGTGGG ATTA CCCACTACAGAAATTATAGAGCCA AAGCATTCCAAAGTC TERM 160 141457 - 141408 - R 100 -15.9 -3.1811 | opp_overlap 141388 141418, overlap 141407 TTTTCTACAAGAAAC GACCCTATAATTCCTGGGGTGGG ATTA CCCACTACAGAAATTATAGAGCC AAAGCATTCCAAAGT TERM 161 141492 - 141461 - R 75 -8.1 -3.75193 | opp_overlap 141462, overlap 141462 141464 AATTATAGAGCCAAA GCATTCCAAAGTC TTGTCT GACTCTGGAATGT TTTCTGTTCACAGTT TERM 162 141491 - 141462 - R 83 -11.6 -2.84393 | opp_overlap 141462, overlap 141461 141464 ATTATAGAGCCAAAG CATTCCAAAGTC TTGTCT GACTCTGGAATG TTTTCTGTTCACAGT TERM 163 141462 - 141491 + r 100 -9.4 -4.66938 | opp_overlap 141462 141461 141464 ATTATAGAGCCAAAG CATTCCAAAGTC TTGTCT GACTCTGGAATG TTTTCTGTTCACAGT transposase_A 142307 - 142041 - | degenerative transposase TERM 164 143496 - 143522 + G 76 -11 -2.50859 | overlap 143495 143493 143490 TATCGGATTTATTGT ATATTCCTTCTG ATA CAGAAGGAATAC CTATGTGTGTTTTAG TERM 165 143739 - 143727 - g 71 -4.9 -4.58698 | opp_overlap 143732, overlap 143732 GTAAATCAAAAATAA GAAAA CAT TTTTC TGTGCAAAAAATGTT TERM 166 143752 - 143732 - g 72 -3.4 -5.16681 | opp_overlap 143732, overlap 143727 TCAAAAATAAGAAAA CATTTTTC TGTGC AAAAAATG TTTGTAGAAACCATG epsG 142595 - 143809 + | glycosyltransferase involved exopolysaccharide (EPS) synthesis glycosyltransferase 143802 - 144755 + | glycosyl transferase family protein ABC-NP 144765 - 146381 + | ABC transporter ATP-binding protein TERM 167 146634 - 146688 + F 100 -28.4 -4.27686 | opp_overlap 146638 AATATCCCAATCTTA TGAACTGCACCCCAAAAGTTAGAT TTATTCT GTCTAACTTTTGGGGTGCAGTTCA TTTTGCATAGTTTTG TERM 168 146684 - 146638 - f 100 -22.7 -3.18681 | opp_overlap 146634 TCCCAATCTTATGAA CTGCACCCCAAAAGTTAGA TTTATTCTG TCTAACTTTTGGGGTGCAG TTCATTTTGCATAGT TERM 169 147605 - 147617 + G 70 -3.4 -4.88736 | overlap 147596 147601 CTTTCACTTGGTGAC CATG TTGAT CATG TTTTTGTGAATAGTA spr0138 147164 - 147919 + | hypothetical protein TERM 170 148749 - 148730 - g 84 -2.2 -5.73672 | overlap 148733 AAACAATTAAAAAAA GAATTTAT AGAA ATAAATGC CCCAGTGATAGAAGC ugd 147932 - 149104 + | UDP-glucose dehydrogenase TERM 171 149359 - 149391 + F 71 -6.3 -4.14511 | TTCTATTTAGAACGA GGATTGAGTTCTGTA TTG TACAAGGCTCGGTCC TTTTAGAGTCAGCTT TERM 172 149399 - 149415 + F 80 -6.5 -4.65895 | CTCGGTCCTTTTAGA GTCAGCT TAA GGCTGGC TTTTTCAATCACCAA TERM 173 149792 - 149773 - g 77 -10.8 -2.82516 | opp_overlap 149775, overlap 149775 TTGCCCATCAGGATA TAGCTGCT TTAG AGCAGCTA TTGGAGGAAGTTGAT TERM 174 149896 - 149884 - g 70 -3.4 -4.9448 | ATTCACTAAATAAAA GCTA CCCAC TAGC AGAGGAGGATAGCGA TERM 175 150285 - 150261 - g 79 -5.8 -4.93547 | GGAAGCAATCAAAAA GAGATTGAAC GCTTT ATCCAATCTC TGCAGGTATTAGAAA mutR 149499 - 150362 + | transcriptional regulator spr0141 150653 - 150886 + | hypothetical protein spr0142 150908 - 151585 + | hypothetical protein spr0143 151597 - 152262 + | hypothetical protein spr0144 152331 - 153560 + | hypothetical protein TERM 176 153588 - 153603 + F 95 -9 -4.93296 | ATAATATATGTTTGA GACTGG ATTG CCAGTC TTTTTATGATGGTCA spr0145 153770 - 154366 + | hypothetical protein TERM 177 155134 - 155111 - g 72 -9 -3.30159 | CCAAGGTTTGGACAA CTTGAAAGTT ATCG AACTTCCAAG CGACCAACAACCGTA ABC-SBP 154470 - 155300 + | ABC transporter substrate-binding protein - amino acid transport ABC-SBP 155454 - 156308 + | lipoprotein TERM 178 156320 - 156344 + F 73 -7.9 -3.79162 | opp_overlap 156319 GTAATAAGAAACAGG GAGGTGGGA GAGAAAA TTCCACCTC TTGCTTTTGTATAGA dapE 156408 - 157781 + | hypothetical protein ABC-NBD 157774 - 158835 + | ABC transporter ATP-binding protein ABC-MSD 158837 - 159529 + | ABC transporter permease TERM 179 159554 - 159527 - T 87 -10 -3.93984 | opp_overlap 159534, overlap 159534 AAATTGAGCCATAAA TAAAAAAGAGCC GCGT GGCTCTTTTTAA CTGATCAGATTTTCT TERM 180 159534 - 159547 + T 86 -8.1 -4.68593 | opp_overlap 159534 159527 GCCATAAATAAAAAA GAGCC GCGT GGCTC TTTTTAACTGATCAG TERM 181 159547 - 159534 - T 93 -8.1 -5.72622 | opp_overlap 159534, overlap 159527 GCCATAAATAAAAAA GAGCC GCGT GGCTC TTTTTAACTGATCAG spr0151 160128 - 159559 - | hypothetical protein spr0152 160263 - 160877 + | hypothetical protein TERM 182 161811 - 161791 - f 70 -6.9 -3.87373 | overlap 161803 GACATTTCCGAGAAA GATCAGGAA TTA CTCCTAATC GCGGAGACGACCAAT hk07 161830 - 162525 + | histidine kinase TERM 183 163668 - 163680 + G 72 -9.1 -3.33151 | opp_overlap 163668 163667, overlap 163667 163676 AAACAACGTATTAAG GCTGC CCA GCAGC TCTTGCTTTCAACCA rr07 162537 - 163823 + | DNA-binding response regulator TERM 184 164164 - 164150 - gf 81 -7.2 -4.56597 | opp_overlap 164149 CCTTGTTCGTAAAAA TTTGCA ATA TGCAAA CTATACTTACGTTGG spr0155 163827 - 164408 + | hypothetical protein TERM 185 164451 - 164423 - gT 87 -6.1 -5.28778 | opp_overlap 164423 164426, overlap 164426 AGTATTGACAAAAAA GAACTATCAAGAT ACA ATCTTGGTAGTTG TTTTTTGATTATAGA TERM 186 164423 - 164451 + GT 93 -8.3 -5.32944 | opp_overlap 164423 164426, overlap 164426 AGTATTGACAAAAAA GAACTATCAAGAT ACA ATCTTGGTAGTTG TTTTTTGATTATAGA TERM 187 164426 - 164448 + GT 100 -10 -4.73828 | opp_overlap 164426 164423, overlap 164423 ATTGACAAAAAAGAA CTATCAAGAT ACA ATCTTGGTAG TTGTTTTTTGATTAT TERM 188 164448 - 164426 - gT 84 -7.8 -4.73105 | opp_overlap 164423 164426, overlap 164423 ATTGACAAAAAAGAA CTATCAAGAT ACA ATCTTGGTAG TTGTTTTTTGATTAT spr0156 164354 - 164956 + | hypothetical protein TERM 189 165086 - 165105 + T 73 -3.6 -5.1287 | overlap 165088 165103 AGTTCTTATAAGAGG TGGTTGAA GTTG TTCAACTG TTTTTTGAGTATAAA TERM 190 165178 - 165143 - T 80 -4.8 -5.2166 | gap 1, opp_overlap 165143 TAAGAACGTAAAAAA GCATAAGTTC-AGGTCT TCA AAACCTTGTTCTTATGC TTTTTATCATAGAAA spr0157 166511 - 165249 - | hypothetical protein TERM 191 166585 - 166575 - R 72 -2.6 -5.26918 | ATATTCTACAAAAAA TTTT GGA AAAA TGCAAGAATATTTTG TERM 192 166800 - 166781 - R 93 -7.9 -5.40464 | opp_overlap 166780 166775 166781 CAGGATAAAGAAAAA CCGAGAA GTTTCT TTCTCGG ATTTGCTTATTATGA TERM 193 166781 - 166800 + r 71 -8.6 -3.06276 | opp_overlap 166781, overlap 166780 166775 CAGGATAAAGAAAAA CCGAGAAG TTTC TTTCTCGG ATTTGCTTATTATGA spr0158 167279 - 166821 - | hypothetical protein TERM 194 166983 - 166959 - G 72 -9.3 -3.28497 | overlap 166963 CCAGTGGAAAGGGAA CCAACCAGCAA GAG TTGCTAGTGGG ACAAAGCCAGCCAGC spr0159 167797 - 167276 - | hypothetical protein TERM 195 167446 - 167436 - G 70 -5.4 -4.41241 | GAAATTTGGATAAAA TTGC TTG GCAA GAGTTTAAGAACCTG TERM 196 167977 - 167994 + H 73 -4.1 -4.86029 | ATGTGGAGGGATTGG GCTCC TATGTGGT GGAGC TTTTCTGTTCTTTCT TERM 197 168108 - 168090 - g 70 -8.9 -3.11634 | TCTCATATTATTGAA TTGCCAG AGATG CTGGCAA ACCAAATCGCAGCTG TERM 198 169305 - 169293 - g 80 -7.7 -4.31379 | overlap 169287 ACCAAGCCAGCAAAA CTGCA TTT TGCAG AGAGAAAGCCTGCTA mutL 168072 - 170021 + | DNA mismatch repair protein TERM 199 170109 - 170058 - T 85 -12.1 -3.1012 | gap 2, opp_overlap 170064, overlap 170064 AAATTTTCAAAATCA GA-AAAACGCATAAAATC-AGGTGT TCAA AAACCTTGATTTTATGCGTTTTATC ATAGAAATATTTACT TERM 200 170102 - 170064 - T 100 -11.3 -5.09245 | gap 1, opp_overlap 170064, overlap 170058 TCAAAATCAGAAAAA CGCATAAAATC-AGGTGT TCAA AAACCTTGATTTTATGCG TTTTATCATAGAAAT TERM 201 170064 - 170102 + T 100 -13.5 -4.4648 | gap 1, opp_overlap 170064 170058 TCAAAATCAGAAAAA CGCATAAAATCAGGTGTT CAAA AAC-CTTGATTTTATGCG TTTTATCATAGAAAT TERM 202 170202 - 170184 - T 77 -10.4 -2.52635 | opp_overlap 170183 170180, overlap 170183 AGTTTTATCAGTAAT CTCAAAAC AGT GTTTTGAG CTAATTTTGCCAGTT ribE 170813 - 170346 - | riboflavin synthase beta chain ribA 172019 - 170814 - | 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II ribC 172674 - 172039 - | riboflavin synthase subunit alpha ribD 173759 - 172659 - | riboflavin biosynthesis protein RibD TERM 203 173691 - 173711 + g 82 -6.1 -4.86033 | GCCGACCATAGGATT GGGGTTG ACGTAAC CAGCCCC TTTTTGTGCCAGTTT TERM 204 173809 - 173778 - H 100 -11.8 -5.03715 | ACTACCTCCAAAAAA TATACCTTGAATAG GGGA CTACTCAAGGCATA CAAAAGAAAACTTAT TERM 205 173871 - 173839 - H 100 -14.4 -5.1356 | TGCGATTAACAAAAA TGCTCTGAAATGAC AAGTA ATCATTTCAGAGCA CGCAAAAAGCACAAA TERM 206 174542 - 174518 - g 80 -6.4 -4.6635 | overlap 174520 AAATTGGCAAGAAAA CAGCCCAGCA GATGG TGCTGGACTT GGAAGGCAAGGTAGT TERM 207 174540 - 174520 - g 79 -9 -3.93768 | overlap 174518 ATTGGCAAGAAAACA GCCCAGCA GATGG TGCTGGAC TTGGAAGGCAAGGTA ruvA 174163 - 174756 + | Holliday junction DNA helicase motor protein TERM 208 175008 - 175022 + G 73 -10 -2.90723 | opp_overlap 175007 TGAATTGGAAGCCAT GCTGGA GAA TCCAGC TATCATTCGAAATAG tag 174766 - 175329 + | DNA-3-methyladenine glycosylase I spr0167 175326 - 176003 + | hypothetical protein TERM 209 176156 - 176137 - T 95 -8.6 -5.30686 | opp_overlap 176137 AATACCGAGAAAAAA GCTGAGAA ACTT TTCCCAGC TTTATTTGTTATAGT TERM 210 176137 - 176156 + T 80 -6.4 -4.7458 | opp_overlap 176137 AATACCGAGAAAAAA GCTGAGAA ACTT TTCCCAGC TTTATTTGTTATAGT spr0168 177189 - 176158 - | MccC family protein TERM 211 177443 - 177399 - R 76 -4.4 -5.20154 | gap 1, opp_overlap 177404 177405 177411, overlap 177411 ATATAACTCAAAAAA GTAAGTGA-AAAAGCAACCGC ACCT GCAGTTGCTTTTATCGTTTTC TTATTCTTGATAGCG TERM 212 177404 - 177438 + r 88 -7.3 -5.00467 | gap 1, opp_overlap 177399 177411, overlap 177405 177411 ACTCAAAAAAGTAAG TGA-AAAAGCAACCGC ACCT GCAGTTGCTTTTATCG TTTTCTTATTCTTGA TERM 213 177405 - 177437 + r 77 -8.6 -3.58654 | gap 1, opp_overlap 177399 177411, overlap 177404 177411 CTCAAAAAAGTAAGT GA-AAAAGCAACCGC ACCT GCAGTTGCTTTTATC GTTTTCTTATTCTTG TERM 214 177430 - 177411 - R 100 -10 -4.788 | opp_overlap 177405 177404 177411, overlap 177399 AAAGTAAGTGAAAAA GCAACCGC ACCT GCAGTTGC TTTTATCGTTTTCTT TERM 215 177411 - 177430 + r 83 -7.8 -4.71401 | opp_overlap 177411 177399, overlap 177405 177404 AAAGTAAGTGAAAAA GCAACCGC ACCT GCAGTTGC TTTTATCGTTTTCTT spr0169 178148 - 177444 - | hypothetical protein corA 179083 - 178139 - | magnesium/cobalt transporter CorA uvrA 179215 - 182046 + | excinuclease ABC subunit A TERM 216 182380 - 182406 + G 85 -12.4 -3.22858 | overlap 182380 182381 TGCAGGTTTGGACTT GCTTCCACAAAC TCA GTTTGTGGAAGG TCTTCGTATGATTAA TERM 217 182381 - 182405 + G 100 -15.9 -2.53233 | overlap 182380 182380 GCAGGTTTGGACTTG CTTCCACAAAC TCA GTTTGTGGAAG GTCTTCGTATGATTA pepP 182039 - 183100 + | peptidase M24 family protein spxA 183232 - 183630 + | transcriptional regulator Spx TERM 218 183620 - 183607 - f 73 -8.1 -3.543 | opp_overlap 183604 GTAGAAAATGCAGAA GCACG TTTG CGTGC AGCTCTATAAACATC TERM 219 183638 - 183658 + F 93 -9.7 -4.10559 | opp_overlap 183635 183634 183638 CTCTATAAACATCAA GGCTGGGAG CAC TTCCCAGTC TTATTCTATTTTAAT TERM 220 183778 - 183762 - g 78 -2.9 -5.36441 | TGCGGACAGAAAAAA GAAACTG GAC CAGCTAC AAAAACAGAAAAAGA spr0174 183696 - 184265 + | hypothetical protein spr0175 184352 - 184618 + | hypothetical protein spr0176 184622 - 185041 + | Holliday junction resolvase-like protein spr0177 185057 - 185362 + | hypothetical protein TERM 221 185417 - 185429 + F 71 -5.5 -4.58283 | GGGGAAGAGTTGGAA CGTCC AGT GGATG TTTTTAGCCCAGTTC TERM 222 185616 - 185628 + F 71 -5.5 -4.62783 | GGGGAAGGGTTGGAA CGTCC AGT GGATG TTTTTAGCCTAGCTC TERM 223 185733 - 185754 + F 77 -5.8 -4.66002 | opp_overlap 185733 GCTAACCAGGTAAGA GGTCGGGA CGAAAA TCCTGGCC TTGTTTTTATTAGTA folC 185813 - 187069 + | dihydrofolate:folylpolyglutamate synthetase TERM 224 187180 - 187196 + G 76 -6.6 -4.43815 | AGATTCACACTTTCT CTTGCT TCTCT AGCAAG TTTTAGTCTCTTAGT spr0179 187066 - 187584 + | hypothetical protein TERM 225 187603 - 187619 + F 95 -8.7 -5.10154 | opp_overlap 187602 187595 187603 TATGCAAGTAGAAAG GGCTGGA TTT TTCAGCC TTTTTACTTTTACCT cls 187730 - 189262 + | cardiolipin synthetase orf47 189340 - 189483 + | hypothetical protein TERM 226 190849 - 190861 + G 86 -9.1 -4.4017 | overlap 190848 AAGAGTGAGCGCTTG TCGCC ATC GGCGA TTTTGTCCCCGTTGC spr0182 189502 - 191058 + | competence-induced protein Ccs4 TERM 227 191958 - 191946 - g 82 -6.3 -4.83593 | AAGAATTATCAAAAA CATCT CAA AGATG CAGAAGAGTGGGTAT nrdD 191172 - 193385 + | anaerobic ribonucleoside triphosphate reductase TERM 228 193562 - 193535 - f 86 -5.6 -5.70522 | opp_overlap 193540, overlap 193542 AAGAACAAGAAAAAA TAAAAGTGAGAG CCAG CTCTCGCTTTTC TCATAGTGGGAGGTA TERM 229 193540 - 193557 + F 82 -7.7 -4.4891 | opp_overlap 193535 193542 CAAGAAAAAATAAAA GTGAGAG CCAG CTCTCGC TTTTCTCATAGTGGG spr0184 193581 - 194087 + | hypothetical protein nrdG 194080 - 194670 + | anaerobic ribonucleoside-triphosphate reductase activating protein spr0186 194667 - 195284 + | hypothetical protein TERM 230 195376 - 195407 + F 79 -8 -4.01089 | opp_overlap 195378 195382, overlap 195378 195382 AAACGAAAAAACAGC AACAAATCCCTTGC AATC GCAGGGGCTTTGTG TTATTCTATTATGGT TERM 231 195378 - 195405 + F 86 -10.6 -3.58527 | opp_overlap 195378 195382, overlap 195376 195382 ACGAAAAAACAGCAA CAAATCCCTTGC AATC GCAGGGGCTTTG TGTTATTCTATTATG TERM 232 195405 - 195378 - f 73 -8.4 -3.67898 | opp_overlap 195378 195376 195382, overlap 195382 ACGAAAAAACAGCAA CAAATCCCTTGC AATC GCAGGGGCTTTG TGTTATTCTATTATG TERM 233 195423 - 195437 + F 73 -8.6 -3.27901 | overlap 195422 195419 TTATTCTATTATGGT GCTGTA AAT TACAGC CTTATTTTTGATGCA rpsJ 195551 - 195859 + | 30S ribosomal protein S10 TERM 234 196646 - 196618 - g 70 -5.4 -4.37092 | gap 1, overlap 196621 196637 AGTTGTTCCAGAAAA GAACGTTATCCTT ATCA AAGG-TAACGTAC CAGGTGCTAAGAAAT rplC 196076 - 196702 + | 50S ribosomal protein L3 rplD 196727 - 197350 + | 50S ribosomal protein L4 rplW 197350 - 197646 + | 50S ribosomal protein L23 rplB 197664 - 198497 + | 50S ribosomal protein L2 TERM 235 198524 - 198505 - Tf 82 -8.6 -4.05319 | AGAAATAATATTAAA CTAGTCGC TTAA GCAACTAG TAAATCCGCCAGCTC spr0193 199198 - 198743 - | hypothetical protein rpsS 198601 - 198882 + | 30S ribosomal protein S19 rplV 198894 - 199238 + | 50S ribosomal protein L22 TERM 236 199405 - 199383 - g 71 -4.8 -4.58685 | opp_overlap 199374 199387 199388, overlap 199388 AAATTCGTTCAAAAA GAACTTGCTG ACG CAGCAGTTTC AACTATTGAAATCGA rpsC 199251 - 199904 + | 30S ribosomal protein S3 rplP 199908 - 200321 + | 50S ribosomal protein L16 TERM 237 200405 - 200391 - g 73 -7.8 -3.9461 | overlap 200367 200392 CTTTCTCAAGAAGAA CTCGCG AAG CGCGAA AACGAATTGAAAAAA rpmC 200331 - 200537 + | 50S ribosomal protein L29 rpsQ 200562 - 200822 + | 30S ribosomal protein S17 rplN 200848 - 201216 + | 50S ribosomal protein L14 TERM 238 201258 - 201234 - f 71 -8.5 -3.12942 | opp_overlap 201233 201234, overlap 201231 201232 TTTAGGAACAAACTA GTCCCCTAGCT TCA AGCTAGGGTGC CCTTATGGGCGTAAG rplX 201294 - 201599 + | 50S ribosomal protein L24 TERM 239 201595 - 201579 - f 74 -2.2 -5.55769 | opp_overlap 201579 CGCTACAACAAAAAA TCAGGC GAAGT GCTTGA TTAATCACGAAGGAA rplE 201623 - 202165 + | 50S ribosomal protein L5 rpsN 202183 - 202452 + | 30S ribosomal protein S14 TERM 240 203034 - 203007 - g 85 -5.6 -5.24129 | CGTGTCTACAAAAAA CGTGAAGACCTT CCAA AAGTTCTTAACG GACTTGGAATTGCCA rpsH 202737 - 203135 + | 30S ribosomal protein S8 rplF 203327 - 203863 + | 50S ribosomal protein L6 TERM 241 203901 - 203855 - f 87 -10.5 -3.78677 | gap 2, opp_overlap 203862 203864 203865, overlap 203853 203864 203865 AAAGAAGGTAAAACA GGTAAATAATGTTGAGTGGTTGA TCA TCAACCAC-CAAC-CTATTTTCC AACTTTGTGCATAGC TERM 242 203864 - 203893 + F 77 -8.7 -3.68071 | gap 1, opp_overlap 203864 203855 203853 203865, overlap 203862 203865 AAAACAGGTAAATAA TGTTGAGTGGTTGA TCA TCAACCAC-CAACC TATTTTCCAACTTTG TERM 243 203893 - 203864 - f 82 -8.7 -4.03611 | gap 1, opp_overlap 203862 203864 203865, overlap 203855 203853 203865 AAAACAGGTAAATAA TGTTGAGTGGTTGA TCA TCAACCAC-CAACC TATTTTCCAACTTTG TERM 244 203892 - 203865 - f 85 -12.2 -3.0054 | gap 1, opp_overlap 203865 203864 203862, overlap 203864 203855 203853 AAACAGGTAAATAAT GTTGAGTGGTTGA TCA TCAACCAC-CAAC CTATTTTCCAACTTT TERM 245 203865 - 203892 + F 84 -12.2 -2.8012 | gap 1, opp_overlap 203864 203855 203853 203865, overlap 203864 203862 AAACAGGTAAATAAT GTTGAGTGGTTGA TCA TCAACCAC-CAAC CTATTTTCCAACTTT rplR 203947 - 204303 + | 50S ribosomal protein L18 rpsE 204321 - 204815 + | 30S ribosomal protein S5 rpmD 204829 - 205011 + | 50S ribosomal protein L30 TERM 246 205060 - 205008 - f 82 -8.8 -4.0802 | opp_overlap 205005 205012 205059, overlap 205012 205016 205052 205058 AGTTGAAGAAGTAAA CTA-ATGAAGTTTTAGGGGATGTGCA CTG TAC-CATCCCCTAAAACTAGATATAG TCATCTATGATGACA TERM 247 205012 - 205055 + F 76 -9.8 -2.85606 | gap 1, opp_overlap 205008 205012 205016 205052, overlap 205005 GAAGAAGTAAACTAA TGAAGTTTTAGGGGAT-GTGC ACT GTACCATCCCCTAAAACTAGA TATAGTCATCTATGA TERM 248 205055 - 205012 - f 82 -9.8 -3.65261 | gap 1, opp_overlap 205012 205005, overlap 205008 205016 205052 GAAGAAGTAAACTAA TGAAGTTTTAGGGGATGTGCA CTG TAC-CATCCCCTAAAACTAGA TATAGTCATCTATGA TERM 249 205051 - 205016 - f 100 -15 -3.51804 | gap 1, opp_overlap 205012 205005, overlap 205012 205008 AAGTAAACTAATGAA GTTTTAGGGGATGTGCA CTG TAC-CATCCCCTAAAAC TAGATATAGTCATCT TERM 250 205074 - 205060 - f 71 -8.6 -3.10531 | opp_overlap 205005 205059, overlap 205052 205058 CTAAAACTAGATATA GTCATC TAT GATGAC ATCGTATAGGCGAGT rplO 205156 - 205596 + | 50S ribosomal protein L15 secY 205609 - 206919 + | preprotein translocase subunit SecY TERM 251 206944 - 206922 - f 100 -12.2 -4.92791 | overlap 206934 CAGAACAGAATAAAA GTATTTACTG AAT CAGTAAATAC TGAGGGAGTGGAGGT TERM 252 206950 - 206996 + F 71 -6.7 -4.1922 | gap 1, opp_overlap 206965, overlap 206946 CAGTAAATACTGAGG GAGTGGAGGTTTAAACTCTGAC ATTT GTAAGAGTT-GGATCTCCCCTC TTCTATTTTGTTTTT adk 207070 - 207708 + | adenylate kinase infA 207771 - 208043 + | translation initiation factor IF-1 rpmJ 208068 - 208184 + | 50S ribosomal protein L36 rpsM 208202 - 208567 + | 30S ribosomal protein S13 rpsK 208585 - 208968 + | 30S ribosomal protein S11 TERM 253 209855 - 209845 - g 79 -5.4 -4.9792 | GATTTGACAGAAAAA TCTG AAG CAGA GATGATGAAAGTACG rpoA 209011 - 209946 + | DNA-directed RNA polymerase subunit alpha rplQ 209958 - 210344 + | 50S ribosomal protein L17 TERM 254 210512 - 210462 - f 84 -12.1 -2.8547 | opp_overlap 210462 AGTTGGGATAGTAGA CGCTTGTTTACGAAATTGTTTTT TTCTT AAGAACAACTTCGTAAGCAGGCG TTTTTGAGTATTTTC TERM 255 210462 - 210512 + F 100 -16.5 -4.80396 | opp_overlap 210462 AGTTGGGATAGTAGA CGCTTGTTTACGAAATTGTTTTT TTCTT AAGAACAACTTCGTAAGCAGGCG TTTTTGAGTATTTTC spr0217 210609 - 210875 + | hypothetical protein spr0218 210885 - 212222 + | hypothetical protein TERM 256 212400 - 212417 + F 74 -3.3 -5.22137 | overlap 212395 TAATCTCCTTCAAAA GTCGCCT GTAT GGGTGGC TTTTATTTTATCATT gpmB 212409 - 213158 + | phosphoglycerate mutase family protein TERM 257 213244 - 213220 - T 89 -6.4 -5.64304 | gap 1, opp_overlap 213220 CAAGATAAGAAAAAA CAGCCG-AGGG TACT CCTTTCGGCTG TTTTTGATGTGGAAA TERM 258 213220 - 213244 + T 100 -10 -4.8048 | opp_overlap 213220 CAAGATAAGAAAAAA CAGCCGAGGG TACTC CTTTCGGCTG TTTTTGATGTGGAAA ABC-MSP 214295 - 213261 - | ABC transporter membrane-spanning permease - iron transport ABC-MSP 214906 - 214280 - | ABC transporter membrane-spanning permease - iron transport ABC-NBD 215987 - 214896 - | ABC transporter ATP-binding protein ABC-SBP-truncation 216368 - 216000 - | ABC transporter solute-binding protein - iron transport, truncation ABC-SBP-truncation 216707 - 216513 - | ABC transporter substrate-binding protein - iron transport, truncation TERM 259 216794 - 216807 + r 73 -3.9 -5.09259 | TGTTTTGATATTCTT TGATA ACAT TATCA TTTTCTTTTGAAGTA TERM 260 217355 - 217329 - R 81 -6 -4.84017 | overlap 217316 AATTCTCTACAAAAA GAAGAATAGC CTATTTT ACTATTCTTC CGAGTGATTTCAATT spr0225 217536 - 217339 - | hypothetical protein pflE 218387 - 217611 - | pyruvate formate-lyase 3 TERM 261 218853 - 218838 - g 83 -6.2 -5.12785 | opp_overlap 218837 CAAGCAAAAAAGAAA TGTTAC GATT GTAACA AATTCATTTTTTATA deoR 218461 - 219255 + | DEOR-type transcriptional regulator spr0228 219268 - 220248 + | hypothetical protein TERM 262 220252 - 220274 + F 93 -7.8 -5.67529 | opp_overlap 220252 220253 220255, overlap 220253 CTAGGTGAGTGAAAA TGATAGACTG ATT CAGTTTATCG TTTTTCTTTTTAGTT TERM 263 220253 - 220273 + F 85 -9.1 -3.96857 | opp_overlap 220252 220253 220255, overlap 220252 TAGGTGAGTGAAAAT GATAGACTG ATT CAGTTTATC GTTTTTCTTTTTAGT TERM 264 220634 - 220620 - g 70 -2.8 -5.01553 | AATCTACAAACAAAA TTCTTG GCA CAGGAA GCGTCTGGTACAAAG PTS-EIIA 220443 - 220763 + | PTS system, IIA component TERM 265 220776 - 220761 - f 80 -4.8 -5.27923 | opp_overlap 220761 GAACTTCATAAAAAA TAATAC TAGA GTATTA TCATTGTTATTAACA TERM 266 220886 - 220876 - g 73 -5.4 -4.52347 | TAAATAATATGAAAA TTGC AGC GCAA GCTAGTGGAGTTGAG PTS-EIIB 220809 - 221117 + | PTS system, IIB component TERM 267 221820 - 221835 + G 71 -6.2 -4.19324 | overlap 221828 TGGATCTTTGTATGG TGCAAT TGGA ATTGCA TTCTTTATATCATTT PTS-EIIC 221110 - 222432 + | PTS system, IIC component TERM 268 224245 - 224230 - g 73 -7.6 -4.07687 | ATTGGTCGTGGAAAA CACCTT AAAG AAGGTG GAGCAGTATATGATT pflF 222574 - 225021 + | formate acetyltransferase 3 TERM 269 225581 - 225613 + G 72 -4.7 -4.67011 | opp_overlap 225570, overlap 225580 225584 ATAATGCTTTAGCTG CAGGTGCGCATGCTG TTA CAGCAGGAGCAGATG TTTTTGAATCAGCTT talC 225040 - 225708 + | fructose-6-phosphate aldolase TERM 270 226644 - 226633 - g 89 -4.4 -5.61596 | AGTTTTACAAAAAAA TTGG TATG CCAA CAACTCTAAAAGAAA gldA 225726 - 226814 + | glycerol dehydrogenase TERM 271 226823 - 226847 + F 93 -8.7 -4.75472 | opp_overlap 226823 AAAATAAACAATAAG GACTACTGTTT TCC AAATGGTAGTC TTTTATTGATCTCCG TERM 272 228150 - 228121 - g 73 -7.1 -4.03078 | opp_overlap 228123, overlap 228123 GTAGCAGACTATAAA CACCAAGCCAGCC TTAA GTCTGACTTGGTT CGTACAGACCTTGCT TERM 273 228148 - 228123 - g 77 -9.7 -3.60505 | opp_overlap 228123, overlap 228121 AGCAGACTATAAACA CCAAGCCAGCC TTAA GTCTGACTTGG TTCGTACAGACCTTG TERM 274 229367 - 229355 - g 74 -6.3 -4.38927 | CTGTCACAGAACAAA TTGAG TCT CTCAA ATTCAACACAGCTAT leuS 227269 - 229770 + | leucyl-tRNA synthetase TERM 275 229863 - 229886 + F 88 -7.5 -5.17054 | opp_overlap 229856 229863, overlap 229882 229885 GAAATAAGGTAGGAA TCCTTCAGA GTAGAA TCTGGAGGA TTTTTTGAATCTTCT TERM 276 230000 - 230040 + G 73 -6.9 -4.15044 | CAAATGATTGGGGAG TCAATGGAAGGTTATACAC CAG GTGAACTGCCTTCTATTGA TTTCTTAGAAGGGCG spr0236 229964 - 230659 + | hypothetical protein spr0237 230671 - 231087 + | hypothetical protein TERM 277 231228 - 231211 - f 79 -9.1 -3.3482 | opp_overlap 231211 CAATCTCCTAATGAA GCCACCC AATC AGGTGGC TTTTTTGCGTGGTGA TERM 278 231211 - 231228 + F 90 -8.4 -5.1101 | opp_overlap 231211 CAATCTCCTAATGAA GCCACC CAATCA GGTGGC TTTTTTGCGTGGTGA TERM 279 231401 - 231420 + F 100 -9.3 -5.15381 | overlap 231416 231418 AATAATCTCCCTTAA CTCCACC CAATCA GGTGGAG TTTTTTAGCTCTATT TERM 280 231858 - 231891 + F 79 -5.3 -5.04987 | opp_overlap 231858 TCATAGGCTAGAAAA GACCCCAAGCTCA CGACCAAA TAAGCTTGAGGTC TTTTTTGACACTATT TERM 281 231891 - 231858 - f 100 -10.4 -4.41548 | opp_overlap 231858 TCATAGGCTAGAAAA GACCCCAAGCTCAC GACCAA ATAAGCTTGAGGTC TTTTTTGACACTATT TERM 282 232071 - 232088 + F 86 -4.8 -5.72622 | opp_overlap 232065 GTGCTAAACTTAGGA GTCACC CAATCA GGTGGC TTTTTTGTTTGTGGC ruvB 232128 - 233126 + | Holliday junction DNA helicase B spr0239 233107 - 233679 + | hypothetical protein TERM 283 233778 - 233801 + F 82 -4.5 -5.41143 | opp_overlap 233781 233783, overlap 233781 233797 TCTCCCTATAAAAAT AAAGTCGCC CAATCA GGCGGCTTA TTTTTTTGAAAAATG TERM 284 233798 - 233781 - f 75 -4.7 -4.96501 | opp_overlap 233781 233778 233797, overlap 233783 CCCTATAAAAATAAA GTCGCCC AATC AGGCGGC TTATTTTTTTGAAAA TERM 285 233781 - 233798 + F 77 -6.2 -4.79949 | opp_overlap 233781 233783, overlap 233778 233797 CCCTATAAAAATAAA GTCGCC CAATCA GGCGGC TTATTTTTTTGAAAA TERM 286 234150 - 234137 - g 73 -6.7 -4.18018 | TTTTTCTACGGAAAA CTGGA CCCG TCCAG ATCAGGAAGTCAAGT uppS 233892 - 234668 + | undecaprenyl diphosphate synthase cdsA 234677 - 235480 + | phosphatidate cytidylyltransferase TERM 287 235544 - 235573 + G 72 -8.5 -3.53444 | overlap 235550 GTTTTCGGGATTATT GTAGTGGTGCACG AGTT CGGGCACTTCTAC TTTGCCAAGAAATCA TERM 288 236223 - 236211 - g 70 -7.7 -3.61764 | TTAGCAACTGGGAAA GCTTG ATC CAAGC TGTGGAAACAGAAAC eep 235502 - 236761 + | determinant for enhanced expression of pheromone TERM 289 238407 - 238397 - g 79 -5.4 -4.96848 | GCCTTGACAGAAAAA CTTG AAG CAAG CTTGATGGGAGCTGG proS 236774 - 238627 + | prolyl-tRNA synthetase TERM 290 238679 - 238649 - f 72 -2.7 -5.24416 | opp_overlap 238649 TAATCAGAAGAAAAA CAAGGAAAAAA TGTAACTAG TTTTTACCTTG TTTTTTCTGTATAAT TERM 291 238649 - 238679 + F 77 -3.4 -5.43414 | opp_overlap 238649 TAATCAGAAGAAAAA CAAGGAAAAAAT GTAACTA GTTTTTACCTTG TTTTTTCTGTATAAT bglA 238727 - 240106 + | 6-phospho-beta-glucosidase TERM 292 240143 - 240111 - f 75 -8.5 -3.37188 | opp_overlap 240113, overlap 240110 240113 ATGGATTTTAAAAAG GACTCTGACTGATTA TCC CAATCGGTCAGAGTT TTTTGCTTACAGGAG TERM 293 240113 - 240141 + F 100 -12.6 -5.26875 | opp_overlap 240113 240111 240110 GGATTTTAAAAAGGA CTCTGACTGATT ATCCC AATCGGTCAGAG TTTTTTGCTTACAGG TERM 294 240141 - 240113 - f 86 -11.1 -3.25166 | opp_overlap 240113, overlap 240111 240110 GGATTTTAAAAAGGA CTCTGACTGATTA TCC CAATCGGTCAGAG TTTTTTGCTTACAGG TERM 295 240556 - 240572 + G 80 -6.5 -4.73864 | overlap 240564 AATGCTCACCCACAC CGCTCTG AGA CAGAACG TTTTGTCTTGGTTCA glmS 240298 - 242106 + | D-fructose-6-phosphate amidotransferase TERM 296 242116 - 242131 + F 77 -5.4 -4.91109 | opp_overlap 242116 242118 GAATAAGCTAAAAAA GTCTAG TTAT CTAGGC TTTTTCTAATGAGCA TERM 297 242131 - 242116 - f 74 -3.2 -5.2166 | opp_overlap 242116, overlap 242118 GAATAAGCTAAAAAA GTCTAG TTAT CTAGGC TTTTTCTAATGAGCA spr0246 242225 - 243274 + | hypothetical protein TERM 298 243302 - 243282 - T 84 -5.5 -5.45652 | AGGCTTAATAAAAAA TCCTAATCA AGT TTATTAGGA CAACAAATATTGTAC TERM 299 243352 - 243327 - T 87 -10.4 -3.71672 | opp_overlap 243327, overlap 243323 TTGTACGAAAATTAA TCCCCCGAGC TATAAT GCTTGGGGGA TTTTTCTATAGGAGG TERM 300 243327 - 243352 + T 100 -12.6 -4.96848 | opp_overlap 243327 243323 TTGTACGAAAATTAA TCCCCCGAGC TATAAT GCTTGGGGGA TTTTTCTATAGGAGG TERM 301 243364 - 243382 + T 95 -6 -6.04324 | GGGATTTTTCTATAG GAGGGCTA GTT TAGTTCTC TTTTTTATTTTTTAG pulA 247144 - 243374 - | alkaline amylopullulanase TERM 302 246846 - 246856 + g 76 -3.2 -5.35365 | GTAGAAGTAGTTGGC TCTG TTG CAGG TTTTTCTTCTGTTTT rpsL 247561 - 247974 + | 30S ribosomal protein S12 TERM 303 248356 - 248340 - g 79 -9.5 -3.68024 | GTGGTGAACACACAA TGCAAGA CCG TCTTGCA AAAGAAATCTTGGAT rpsG 247994 - 248464 + | 30S ribosomal protein S7 TERM 304 248806 - 248826 + F 100 -9.7 -5.08601 | opp_overlap 248806, overlap 248825 TGAAAACATTGAGAA CGGGTAGGT CCT GCCTATCCG TTTTTATTAAAATCG fusA 248889 - 250970 + | elongation factor G TERM 305 250982 - 250959 - f 71 -3.1 -5.06961 | overlap 250960 ATTAAGAAAAATAAA GGTGAAGAC TAATCC GTCCTCACT CTAGAAGGAAGTCAC TERM 306 250984 - 251014 + F 90 -12 -3.35597 | opp_overlap 250989 250993, overlap 250989 AATCCGTCCTCACTC TAGAAGGAAGTCAC TTA GTGGCTTCCTTTTG TCTTTAGAAAATACC TERM 307 250989 - 251009 + F 100 -11.9 -4.78848 | opp_overlap 250989 250993, overlap 250984 GTCCTCACTCTAGAA GGAAGTCAC TTA GTGGCTTCC TTTTGTCTTTAGAAA TERM 308 251009 - 250989 - f 79 -9.7 -3.32844 | opp_overlap 250989 250984, overlap 250993 GTCCTCACTCTAGAA GGAAGTCAC TTA GTGGCTTCC TTTTGTCTTTAGAAA TERM 309 251686 - 251662 - g 76 -9.3 -3.67597 | overlap 251672 CGTGCTATGGAACAA CTGGAGCAGAT GGC ACCTCCTCCAG CGGAAGAGAAACCAG TERM 310 252922 - 252910 - g 85 -5.5 -5.252 | GATTCTTACAAAAAA GCTCG GAT CAAGC ATGCGACCATCTATG polC 251074 - 255465 + | DNA polymerase III PolC TERM 311 255494 - 255524 + F 79 -5.5 -5.20735 | opp_overlap 255493 255491 255494 AATCTATTAGAAGAG GCTAACGTATATC CAATA GATTTACATTAGC TTTCTTTTTTGTTAA spr0252 255567 - 255830 + | hypothetical protein TERM 312 256014 - 256024 + G 79 -6.8 -4.61873 | TGAATGCCATACCCA GCCA GAT TGGC TTTTGGTTTATAAAG spr0253 255823 - 256101 + | hypothetical protein pepS 256296 - 257537 + | aminopeptidase PepS spr0255 257547 - 257777 + | hypothetical protein TERM 313 257883 - 257871 - f 71 -7.7 -3.58905 | AGGTTGCAGATAGAA CTGAC GAA GTCAG CTAAAAACACTGTTT TERM 314 257928 - 257916 - f 71 -7.7 -3.58905 | AGGTTGCAGATAGAA CTGAC GAA GTCAG CTAAAAACACTGTTT TERM 315 257973 - 257961 - f 71 -7.7 -3.58905 | AGGTTGCAGATAGAA CTGAC GAA GTCAG TAACATATATACGGC TERM 316 258071 - 258036 - f 73 -9.1 -2.90307 | opp_overlap 258041, overlap 258041 TGAAGAGTATGAAAC GAAAAGGAGGTTGGT CATTGT ACCAGCCTCCTTTTG ATATGATATAATAGT TERM 317 258041 - 258066 + F 100 -11.2 -4.38171 | opp_overlap 258041 258036 AGTATGAAACGAAAA GGAGGTTGGT CATTGT ACCAGCCTCC TTTTGATATGATATA TERM 318 258066 - 258041 - f 89 -9 -4.59376 | opp_overlap 258041, overlap 258036 AGTATGAAACGAAAA GGAGGTTGGT CATTGT ACCAGCCTCC TTTTGATATGATATA rsuA 258090 - 258812 + | ribosomal small subunit pseudouridine synthase A TERM 319 258931 - 258966 + GF 93 -8.4 -5.32565 | gap 1, opp_overlap 258912 258938 CGAAGAGTATAAATT CGAAAAAGGTGAGGGAC AAT GTCC-TCGCCTTTTATG TTTTTTAGTTGCTTC TERM 320 258959 - 258938 - gf 74 -5.1 -4.72486 | gap 1, opp_overlap 258931 TATAAATTCGAAAAA GGTGAGGGAC AAT GTCC-TCGCC TTTTATGTTTTTTAG spr0257 258893 - 259057 + | hypothetical protein pepC 259029 - 260363 + | aminopeptidase C TERM 321 260403 - 260378 - T 93 -6.9 -5.43487 | opp_overlap 260378 AAAGCATAGAAAAAA GGAATCAGATT TTAG AACCTGGTTCC TTTTTAGTTGCTTGA TERM 322 260378 - 260403 + T 88 -6.9 -4.93547 | opp_overlap 260378 AAAGCATAGAAAAAA GGAATCAGATT TTAG AACCTGGTTCC TTTTTAGTTGCTTGA manN 261330 - 260419 - | phosphotransferase system, mannose-specific EIID manM 262157 - 261354 - | PTS system, mannose-specific IIC component manL 263183 - 262185 - | PTS system, mannose-specific IIAB components TERM 323 263273 - 263285 + r 71 -3.5 -5.10968 | opp_overlap 263266 AGCAACTATTTATCA TAAAA AAT TTTTA TTTTTATATGTTGAT adhP 264377 - 263358 - | alcohol dehydrogenase TERM 324 263675 - 263695 + g 85 -3.9 -5.68438 | CGGCAGTTACGACAG CTGAATGAG CTC CTCCATCAG TTTTTTCTTTAATGA TERM 325 264593 - 264574 - R 100 -12.2 -4.13711 | opp_overlap 264573 264570 TGAAAAGAGCACAAA GACCAGCT TGCA AGCTGGTC ATACTCTTCGAAAAT TERM 326 264659 - 264639 - R 72 -8.3 -3.35996 | overlap 264640 CAGCTTCATCTACAA CCTCAAAGC AGT GCTTTGAGC AACCTACGGCTAGCT TERM 327 264658 - 264640 - R 84 -11.8 -2.61383 | overlap 264639 AGCTTCATCTACAAC CTCAAAGC AGT GCTTTGAG CAACCTACGGCTAGC spr0263 265528 - 264716 - | Cof family protein TERM 328 265249 - 265261 + g 87 -4.9 -5.37043 | opp_overlap 265249 CTGAACGTTGAACCA TATCT AGC AGATA TTTTTTGTCTACAGT TERM 329 266661 - 266647 - g 77 -8.6 -3.92373 | overlap 266659 TATCGTAGCGACAAA TGGTGA AAA TCACCA ATCAGCCAAATTGGA spr0264 265664 - 267136 + | xanthine/uracil permease family protein TERM 330 267149 - 267163 + F 95 -8.5 -5.14563 | overlap 267144 267149 TAATAGAATGACCCA GGGGG ATTTC CCCCC TTTTTTAATACAAAA TERM 331 267149 - 267162 + F 80 -9.5 -3.68256 | overlap 267144 267149 TAATAGAATGACCCA GGGGG ATTT CCCCC CTTTTTTAATACAAA TERM 332 267325 - 267313 - g 77 -7.7 -4.19746 | opp_overlap 267313, overlap 267316 TTGACTTTAAAAGAA GTAGC CCT GCTAC AGTCAGGGCTGATAG spr0265 267187 - 267897 + | hypothetical protein TERM 333 267932 - 267965 + F 70 -3.9 -4.91511 | overlap 267960 GACCTCTTTCTACTA GGGAAAGATGAATGC AATC GTGTCCATCTTTTTC TTTTTATGGTAAAAT sulA 268022 - 268966 + | dihydropteroate synthase TERM 334 269549 - 269535 - g 84 -10 -3.79747 | opp_overlap 269542 GCAGGTATTATCAAA CAAGGG ATG CCCTTG GTAACAGGGCGTATT sulB 268968 - 270290 + | dihydrofolate synthetase folE 270271 - 270825 + | GTP cyclohydrolase I TERM 335 270832 - 270846 + F 80 -6.4 -4.82901 | opp_overlap 270829 270832 GGGCTATAAAAAGAA TCCGTT TCA AGCGGA TTTTTCTAGAAAGGA sulD 270868 - 271680 + | bifunctional folate synthesis protein TERM 336 271686 - 271721 + T 100 -12.1 -4.62783 | opp_overlap 271686, overlap 271678 GAAAAAATAGAAAAA CTCTAGTTTTCAGTT ACTTGC AACTGAAGGCTAGAG TTTTTAAAATAGGTC TERM 337 271721 - 271686 - T 93 -8.4 -5.41787 | opp_overlap 271678 271686 GAAAAAATAGAAAAA CTCTAGTTTTCAGTTA CTTG CAACTGAAGGCTAGAG TTTTTAAAATAGGTC spr0270 272096 - 271725 - | hypothetical protein rplM 272399 - 272845 + | 50S ribosomal protein L13 rpsI 272865 - 273257 + | 30S ribosomal protein S9 TERM 338 273284 - 273303 + F 89 -6.4 -5.75599 | opp_overlap 273284 TACTATACTTATACA GAGCACCT TTCG GGGTGTTC TTTTTTTATACTTTC TERM 339 273440 - 273466 + F 89 -7.3 -5.25656 | opp_overlap 273440 TATCAATGTTTCAAA GCACTCAAAAG TTTAC CTTATGGGTGC TTTTTTCGTGCTTTT TERM 340 273789 - 273743 - g 89 -9 -4.8048 | gap 1, opp_overlap 273743 273745 273746, overlap 273746 GGCTCATATCAAAAA GCACCTCA-AAAAGGTATTAC CAAGTT GCAATACCTTTTATGAGGCTC TTTTGTCCTGCTCTT TERM 341 273786 - 273746 - g 85 -11.5 -3.30658 | gap 1, opp_overlap 273746 273745 273743, overlap 273743 TCATATCAAAAAGCA CCTCA-AAAAGGTATTAC CAAGTT GCAATACCTTTTATGAGG CTCTTTTGTCCTGCT transposase_B 273609 - 273815 + | degenerate transposase bglB-truncation 273803 - 273895 + | phospho-beta-glucosidase, truncation TERM 342 273907 - 273932 + F 100 -12.1 -5.47399 | opp_overlap 273907 TTAGTTCATAAAAAA CAAGTTTAGAT CCTC ATCTAAACTTG TTTTTTTAAAATTGA TERM 343 273932 - 273907 - f 100 -12.1 -5.26316 | opp_overlap 273907 TTAGTTCATAAAAAA CAAGTTTAGAT CCTC ATCTAAACTTG TTTTTTTAAAATTGA TERM 344 274242 - 274222 - g 71 -4.8 -4.54306 | gap 1, overlap 274225 TTTAAGAAAAAAATA TC-ACTTGC AGAT GCAAGTTGA ACGTTATATAGAAGA spr0275 273944 - 274309 + | hypothetical protein celA 274499 - 275935 + | 6-phospho-beta-glucosidase TERM 345 275969 - 275938 - f 100 -16.2 -2.8214 | opp_overlap 275942 275946, overlap 275942 275946 ATCAGTAGAATAGTA TAAACAAACTGAGA TTAT TCTCAGTTTGTTTA GCATATTGAGGTGAC TERM 346 275942 - 275965 + F 95 -12.6 -3.66803 | opp_overlap 275938 275942 275946, overlap 275946 GTAGAATAGTATAAA CAAACTGAGA TTAT TCTCAGTTTG TTTAGCATATTGAGG TERM 347 275965 - 275942 - f 100 -12.6 -4.08571 | opp_overlap 275942 275946, overlap 275938 275946 GTAGAATAGTATAAA CAAACTGAGA TTAT TCTCAGTTTG TTTAGCATATTGAGG TERM 348 275946 - 275961 + F 81 -7.6 -4.4572 | opp_overlap 275942 275938 275946, overlap 275942 AATAGTATAAACAAA CTGAGA TTAT TCTCAG TTTGTTTAGCATATT TERM 349 275961 - 275946 - f 82 -7.6 -4.61852 | opp_overlap 275946 275942, overlap 275942 275938 AATAGTATAAACAAA CTGAGA TTAT TCTCAG TTTGTTTAGCATATT spr0277 275987 - 276226 + | hypothetical protein celB 276356 - 276670 + | cellobiose phosphotransferase system IIB component TERM 350 277686 - 277669 - g 82 -4.2 -5.48303 | overlap 277681 ACAATGTCAAAAAAA TCAGAA GAATAT TTCTGA AGAAGTTTTAAAAAA bglG 276788 - 278767 + | BigG family transcription antiterminator celC 278777 - 279091 + | cellobiose phosphotransferase system IIA component spr0281 279110 - 279616 + | hypothetical protein TERM 351 279766 - 279751 - g 72 -9 -3.37522 | opp_overlap 279750 279751 ATGTTATGGAACCAA TGGGCA AACT TGCCCA GTTTAAAGTAGTACG TERM 352 280741 - 280755 + G 75 -5.8 -4.75174 | opp_overlap 280741 CAGCCTTATTTAATA TTAATG AAC CATTAA TTTTTGGATTACCTA celD 279696 - 281042 + | cellobiose phosphotransferase system IIC component TERM 353 281105 - 281140 + F 100 -9.2 -5.19819 | gap 1, opp_overlap 281105 281117 TGAGTGTTAACATTA GCAGTGAAGAG-ATCTT TTT AAGATATTCTTCTCTGC TTTTTCATTTTATTT spr0283 281424 - 281600 + | hypothetical protein TERM 354 281964 - 281947 - f 77 -5.5 -5.01845 | opp_overlap 281942 281947 CAGAATAATGAAAAA CGCATCA AAAA TGGTGCG TTCTGTTTTTATGCT TERM 355 281947 - 281964 + F 78 -7.7 -4.1472 | opp_overlap 281947, overlap 281942 CAGAATAATGAAAAA CGCATCA AAAA TGGTGCG TTCTGTTTTTATGCT TERM 356 282876 - 282890 + G 75 -2.8 -5.31158 | opp_overlap 282876 GGTTAAATGTAGAAC TAGAAG AAC CTGCTA TTTTTGATTTTTTTA xylS 282002 - 284215 + | Alpha-xylosidase TERM 357 284329 - 284354 + T 77 -4.7 -5.20783 | ACATAGACTTTACAA CACTTCATGTT TCAT ATCATGGGGTG TTTTTCTATTTAAGT TERM 358 284429 - 284387 - T 85 -6.6 -5.29385 | gap 1, opp_overlap 284387 284419 AAGCCAATCAAAAAA TCTCACTATTCATCAGGTT AAAGGA AACCTAATCA-TAGTGAGA TTGTGAATTATAGTA basA 284913 - 284437 - | glutathione peroxidase TERM 359 285163 - 285149 - g 75 -2.8 -5.31519 | opp_overlap 285149 285157, overlap 285157 ACATGCAAACAAAAA CAAAGA AGC TCATTG TGAGTTTGTCTTCAC TERM 360 287681 - 287710 + G 70 -9.5 -2.59028 | opp_overlap 287679, overlap 287673 CTGAAACCCAAAGTG TCTTTTTAGAATC GTCC GATTCGAAAAAGA ATATTGGTTACTTTT hysA 285103 - 288339 + | hyaluronate lyase precursor (hyaluronidase/hyase) TERM 361 288390 - 288415 + T 83 -4.8 -5.45802 | opp_overlap 288390 GGAAAATAGAAAAAA TCCGAAGA AGGCCAAATA TCTTCGGA TTTTTCTTTTAAAAA TERM 362 288415 - 288390 - T 86 -4.8 -5.63645 | opp_overlap 288390 GGAAAATAGAAAAAA TCCGAAGA AGGCCAAATA TCTTCGGA TTTTTCTTTTAAAAA TERM 363 288452 - 288431 - T 74 -5.9 -4.56597 | opp_overlap 288418 288432, overlap 288432 TTTTTCTTTTAAAAA GGGATAAGT TGAT ACTTATCCT TTTTTACTTCATTAT TERM 364 288451 - 288432 - T 79 -9.4 -3.33744 | opp_overlap 288418 288432, overlap 288431 TTTTCTTTTAAAAAG GGATAAGT TGAT ACTTATCC TTTTTTACTTCATTA TERM 365 288432 - 288451 + T 100 -9.4 -5.32565 | opp_overlap 288432 288431, overlap 288418 TTTTCTTTTAAAAAG GGATAAGT TGAT ACTTATCC TTTTTTACTTCATTA TERM 366 288639 - 288615 - T 82 -7.7 -4.55287 | overlap 288580 288618 288619 CGGAGCGAGACAAAA CAACCACCCGC TAT GCGGGTGCGCG TCGAAGGTTATACCA TERM 367 288636 - 288618 - T 100 -10.2 -4.38744 | overlap 288615 288619 AGCGAGACAAAACAA CCACCCGC TAT GCGGGTGC GCGTCGAAGGTTATA TERM 368 288635 - 288619 - T 93 -13.7 -3.22162 | overlap 288618 288615 GCGAGACAAAACAAC CACCCGC TAT GCGGGTG CGCGTCGAAGGTTAT TERM 369 289132 - 289110 - T 76 -7.8 -3.94184 | opp_overlap 289114, overlap 289114 ATAGTCAAGATTAAA GAAATTATCC AGT GGATGATTTC TTCACGAGTATGAAA TERM 370 289424 - 289403 - T 90 -11.5 -3.72051 | opp_overlap 289400 289398, overlap 289385 TTGAACAACGTGAAA GCCAGCGTC TTTA GGCGCTGGC TGATGATTTGGGCTT TERM 371 289451 - 289480 + T 76 -6.5 -4.56358 | gap 1, opp_overlap 289456, overlap 289456 GCTTATAGCTCTGGG ATA-AACCACCCGT TTG ACGGGTGGTTATGA TTTTATCTGAGTGTA TERM 372 289474 - 289456 - T 100 -14.6 -3.86015 | opp_overlap 289456 289451 TAGCTCTGGGATAAA CCACCCGT TTG ACGGGTGG TTATGATTTTATCTG TERM 373 289456 - 289474 + T 100 -14.6 -3.74012 | opp_overlap 289456, overlap 289451 TAGCTCTGGGATAAA CCACCCGT TTG ACGGGTGG TTATGATTTTATCTG kdgA 290112 - 289483 - | keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase kdgK 291123 - 290122 - | 2-keto-3-deoxygluconate kinase spr0289 291795 - 291154 - | hypothetical protein gno 292629 - 291814 - | gluconate 5-dehydrogenase PTS-EII 292900 - 293334 + | PTS system, IIA component TERM 374 294351 - 294339 - g 75 -7.7 -3.98204 | opp_overlap 294347 AAAGATATTTATAAA CATGC TAT GCATG CCATGCTTCGTTCCT ugl 293346 - 294536 + | glucuronyl hydrolase TERM 375 295009 - 294983 - g 78 -7.3 -4.43681 | CATTTAATACGAAAA CAACTCCAACA GGAAA TGATGGAGCTG TTCAAGTCAACATTA PTS-EII 294547 - 295038 + | PTS system, IIB component PTS-EII 295053 - 295832 + | PTS system, IIC component PTS-EII 295819 - 296637 + | PTS system, IID component spr0296 296637 - 296930 + | preprotein translocase, YajC subunit TERM 376 296939 - 296906 - f 71 -7.7 -3.66921 | gap 1, opp_overlap 296913, overlap 296913 AAGTGTAATGGGAAA GACAAAAGAACTGCTT TTT AAGTAGTTCTTTT-TC TGGTAATAGATAATG TERM 377 296933 - 296913 - f 83 -6.9 -4.79451 | opp_overlap 296913, overlap 296906 ATGGGAAAGACAAAA GAACTGCTT TTT AAGTAGTTC TTTTTCTGGTAATAG TERM 378 296913 - 296933 + F 100 -9.1 -4.93296 | opp_overlap 296906 296913 ATGGGAAAGACAAAA GAACTGCTT TTT AAGTAGTTC TTTTTCTGGTAATAG spr0297 296952 - 298853 + | hypothetical protein TERM 379 299020 - 299007 - g 76 -3.1 -5.32699 | GGAAATATGAAAAAA TGTCC CAAG AGACA CGTGAAAAGATTGAA regR 298847 - 299914 + | GalR family transcription regulator TERM 380 299987 - 299956 - T 100 -16.1 -5.09762 | opp_overlap 299956 299959 TGTTAAGAAATAAAA TAATCCCACCTAG AACAAG CTAGGTGGGATTA TTTGCCTATGAAATG TERM 381 299956 - 299987 + T 100 -16.1 -3.71378 | opp_overlap 299956, overlap 299959 TGTTAAGAAATAAAA TAATCCCACCTAG AACAAG CTAGGTGGGATTA TTTGCCTATGAAATG TERM 382 299959 - 299984 + T 100 -13.4 -3.98913 | opp_overlap 299956, overlap 299956 TAAGAAATAAAATAA TCCCACCTAG AACAAG CTAGGTGGGA TTATTTGCCTATGAA spr0299 300406 - 300143 - | hypothetical protein spr0300 300602 - 300360 - | hypothetical protein yorfE 300812 - 300618 - | transcriptional regulator TERM 383 300847 - 300861 + H 75 -7.2 -4.11394 | ATGTCGTATATATTT GACTAT ATT ATAGTC TTTTAAACATAAAGT TERM 384 301319 - 301333 + G 73 -2.1 -5.18726 | gap 1 TAGTCCTCAATTGGA CCAGCG TGAG CG-TGG TTTTTCTTATAAAAA mraW 300978 - 301928 + | S-adenosyl-methyltransferase MraW ftsL 301940 - 302257 + | cell division protein FtsL TERM 385 303943 - 303965 + G 74 -6.3 -4.4195 | overlap 303945 GAAAAATGGTGGTTA TCTAGTCGG GTTAA CCGACTATA TTTTCTCGGCTGTAT TERM 386 303945 - 303963 + G 79 -8.9 -3.81279 | overlap 303943 AAAATGGTGGTTATC TAGTCGG GTTAA CCGACTA TATTTTCTCGGCTGT pbpX 302261 - 304513 + | penicillin-binding protein 2X mraY 304515 - 305495 + | phospho-N-acetylmuramoyl-pentapeptide-transferase TERM 387 305502 - 305521 + F 100 -12.2 -5.20783 | opp_overlap 305500 TTGATGTAAGAATGG CACCCTGA TGTT TCAGGGTG TTTTTGTGTTTAAAT TERM 388 305807 - 305763 - g 87 -5.1 -5.47431 | opp_overlap 305778, overlap 305765 CGAAGAGATAAAAAA TATTGGTCAATTAAAGTCAAA ATA CTTGACCTTTTCTGACCAATG TAGTATATTATGAAC TERM 389 305805 - 305765 - g 80 -7.7 -4.35708 | opp_overlap 305778, overlap 305763 AAGAGATAAAAAATA TTGGTCAATTAAAGTCAAA ATA CTTGACCTTTTCTGACCAA TGTAGTATATTATGA spr0306 305635 - 305820 + | hypothetical protein clpL 306052 - 308157 + | ATP-dependent protease ATP-binding subunit TERM 390 308212 - 308181 - T 76 -3.7 -5.31275 | opp_overlap 308184, overlap 308184 TTTGAGGATAAAAAA GAAGGAGCCAGCT GAAAAA AACTGGTTCCTTT TTAGGTACGACAGGC TERM 391 308184 - 308209 + T 74 -5.4 -4.65895 | opp_overlap 308181 308184 GAGGATAAAAAAGAA GGAGCCAGCT GAAAAA AACTGGTTCC TTTTTAGGTACGACA TERM 392 308209 - 308184 - T 74 -5.4 -4.74611 | opp_overlap 308184, overlap 308181 GAGGATAAAAAAGAA GGAGCCAGCT GAAAAA AACTGGTTCC TTTTTAGGTACGACA luxS 308935 - 308453 - | S-ribosylhomocysteinase TERM 393 308825 - 308839 + g 74 -6.4 -4.37067 | opp_overlap 308824 GCGAATATCATAATT GGAGAT GAT GTCTCC TTTTGGTCCTGTTTC TERM 394 309020 - 309001 - R 100 -9.3 -4.6645 | overlap 308992 308994 GAGACAGAGAGAAAA CCTCTCC GAGGCT GGAGAGG TTGAAATCTTTACTT spr0309 310514 - 309030 - | hypothetical protein TERM 395 309440 - 309451 + g 70 -5.8 -4.46576 | ATTCAAAGGCTAGGG CTGG TCCA CCAG TTTCTTCTGCTTTTT TERM 396 310319 - 310341 + g 79 -9.2 -3.85542 | TCACAACCTCAACCT GCTCTTTCAA TTC TTGCAAGAGC TTGATTTTGTTGTCA dexB 310667 - 312274 + | glucan 1,6-alpha-glucosidase spr0311 312433 - 312606 + | hypothetical protein transposase_B 312760 - 312599 - | degenerate transposase TERM 397 312625 - 312671 + g 89 -9 -4.8048 | gap 1, opp_overlap 312625 312627 312628, overlap 312628 AAGAACAAGACAAAA GAGCCTCATAAAAGGTATTGC AACTTG GTAATACCTTTT-TGAGGTGC TTTTTGATATGAGCC TERM 398 312671 - 312625 - G 74 -4.6 -4.83518 | gap 1, opp_overlap 312625 312628, overlap 312627 312628 AAGAACAAGACAAAA GAGCCTCATAAAAGGTATTGC AACTTG GTAATACCTTTT-TGAGGTGC TTTTTGATATGAGCC TERM 399 312628 - 312668 + g 85 -11.5 -3.30658 | gap 1, opp_overlap 312627 312625 312628, overlap 312625 AACAAGACAAAAGAG CCTCATAAAAGGTATTGC AACTTG GTAATACCTTTT-TGAGG TGCTTTTTGATATGA transposase_A 313462 - 313115 - | transposase TERM 400 313392 - 313414 + g 72 -3.4 -5.0133 | TCTGTTATACTACCT GTTCGCTC ACAATAA GAGAGAAC TTTTTTACGAAAATC TERM 401 313734 - 313716 - gH 83 -6 -5.02476 | overlap 313719 AGACGTTTTAAAAAA TCACGTTC ACA GAAAGTGA AGCGAAGTGTTAATA cps2A 313695 - 314657 + | hypothetical protein cps2H 314551 - 315585 + | hypothetical protein cps2I 315715 - 316872 + | hypothetical protein cps2J 316869 - 318278 + | hypothetical protein TERM 402 318457 - 318439 - g 71 -5.3 -4.59212 | opp_overlap 318439 AATTAATCAAAGAAA GTCACCT ATTCA AGATGAC TATATAGAGAAATAT cps2K 318314 - 319552 + | hypothetical protein cps2P 319581 - 320186 + | hypothetical protein TERM 403 320516 - 320530 + G 78 -7.1 -4.33417 | CAGCCTAGTCCAGAT GGCCT TGCTC AGGCC TTTCTTATCGGTGAG cps2L 320264 - 321133 + | hypothetical protein cps2M 321134 - 321727 + | hypothetical protein cpsN 321740 - 322789 + | dTDP-glucose-4,6-dehydratase TERM 404 322787 - 322813 + F 72 -8.2 -3.37493 | opp_overlap 322787 322793, overlap 322793 GAGATTATTACAGTA TAAAAAGCAG GAAATAG CTGCTTTTTA TTGCTATATTGGGAA TERM 405 323347 - 323325 - g 73 -10 -2.91695 | overlap 323322 GGTATTTGGAAATTA TGGCAAAAAC TTC GTTTTTACCA TGCAAAATCTTGCGA cpsO 322855 - 323706 + | dTDP-L-rhamnose synthase transposase_G-truncation 323782 - 324228 + | hypothetical protein spr0325 324231 - 324680 + | hypothetical protein TERM 406 324655 - 324669 + F 93 -10 -4.14243 | opp_overlap 324655 TGGGACGGAGTAAAA GAGTCC AGT GGACTC TTTTAGCCTAAGCTC TERM 407 324669 - 324655 - f 100 -10 -4.2828 | opp_overlap 324655 TGGGACGGAGTAAAA GAGTCC AGT GGACTC TTTTAGCCTAAGCTC spr0326 324751 - 324909 + | hypothetical protein TERM 408 324955 - 324914 - f 100 -9.7 -4.57581 | gap 1, opp_overlap 324914 AGTGCAAATAAGAAA TCTCCAGATTAG-GAACT ATCCGTG AGTTCTCTAGTCTGGAGA TTTTTCAATATACTT TERM 409 324914 - 324955 + F 100 -11.9 -4.72333 | gap 1, opp_overlap 324914 AGTGCAAATAAGAAA TCTCCAGATTAG-GAACT ATCCGTG AGTTCTCTAGTCTGGAGA TTTTTCAATATACTT TERM 410 325650 - 325636 - g 82 -8.6 -4.17556 | opp_overlap 325635 TACACTTTGAACAAA CCAGAA AGC TTCTGG AATTCTAAGACAACC TERM 411 326389 - 326353 - g 77 -5.2 -4.93318 | gap 1, overlap 326354 326355 326358 326380 326383 TACAATCCAGAAAAA GCCAAGGCTGAATTTGC TAAA GCTAAATCAGCCTT-AC AAGCAGAAGGTGTGA TERM 412 326385 - 326358 - g 72 -8.4 -3.49077 | overlap 326355 326353 326354 326380 326383 TCCAGAAAAAGCCAA GGCTGAATTTGC TAAA GCTAAATCAGCC TTACAAGCAGAAGGT aliA 325111 - 327093 + | ABC transporter substrate-binding protein - oligopeptide transport TERM 413 327105 - 327153 + F 73 -7.8 -3.85817 | opp_overlap 327105 327107, overlap 327114 327142 ATAACTGTTGCAAAA TATAAGAAAGGATTTAGTATTT CTCTT GAATGCTGAATCCTTTTTTACA TTTGTAAAGAAAGAT TERM 414 327114 - 327144 + F 85 -6.3 -5.24449 | opp_overlap 327107 327105, overlap 327105 327142 GCAAAATATAAGAAA GGATTTAGTATTT CTCTT GAATGCTGAATCC TTTTTTACATTTGTA TERM 415 328254 - 328235 - g 91 -9.4 -4.63527 | TGACCATCTTAAAAA TGAGAAGA AGAT TCTTCTCA AGGCGGGCTCTTATG TERM 416 328338 - 328324 - g 82 -7.8 -4.59511 | AAGAGGGGGTAAAAA CAGAGG ATA CCCCTG CTGAAAAAGAAACAG TERM 417 329536 - 329524 - g 75 -2.7 -5.27477 | ACTTCAATGAAAAAA TTCTC CGT AAGAA TCCAGATGGAAGCTA spr0328 327393 - 332696 + | cell wall surface anchor family protein TERM 418 332795 - 332772 - T 100 -15.4 -5.02502 | opp_overlap 332772 TATAGTACAGAAAAA GCCTGAGAAG ATGT CTTCTCAGGC TTTTGTTAAGCACAT TERM 419 332772 - 332795 + T 100 -15.4 -4.63486 | opp_overlap 332772 TATAGTACAGAAAAA GCCTGAGAAG ATGT CTTCTCAGGC TTTTGTTAAGCACAT TERM 420 332856 - 332835 - T 100 -9.5 -5.14965 | AGTGCTATGAAAAAA TCACCCAGA AAAA TCTGGATGA TAAATGTTATGGTTG pbpA 335022 - 332863 - | penicillin-binding protein 1A TERM 421 334829 - 334843 + g 73 -2.1 -5.22006 | overlap 334825 CGTTCAGAACCCAAG TCAGC AATGA GTTGA TTTTTATTGTCGTAG recU 335615 - 335019 - | Holliday junction-specific endonuclease TERM 422 335895 - 335874 - g 71 -9.5 -2.78463 | AGGTTGCTCAGGAGA TGAAAACCG AATA CGGTTTCCA GTTGGCCACCATTTT spr0331 335681 - 336208 + | hypothetical protein spr0332 336266 - 336607 + | hypothetical protein TERM 423 337023 - 337049 + F 100 -10.2 -5.0538 | AAATTGCATATAGGT TGGGGCTGAGAA ATT TTCTCAACCTCA TTTTTTAAAGTGGAC spr0333 337078 - 338250 + | hypothetical protein TERM 424 338287 - 338276 - g 93 -5.8 -5.55664 | TCATGAGTAAAAAAA GACG AAAT CGTC ATAAAAAAGAAGCTC spr0334 338263 - 339657 + | hypothetical protein gnd 339733 - 341157 + | 6-phosphogluconate dehydrogenase csrR 341169 - 341858 + | DNA-binding response regulator TERM 425 341863 - 341884 + F 100 -9.5 -5.03747 | opp_overlap 341858 341863 TGCAAGAATAGAAAA GCAGTTGCA GTTG TGTAACTGC TTTTTTGAGGAGTTT TERM 426 341884 - 341863 - f 83 -7.3 -4.79752 | opp_overlap 341863, overlap 341858 TGCAAGAATAGAAAA GCAGTTGCA GTTG TGTAACTGC TTTTTTGAGGAGTTT TERM 427 341976 - 341997 + G 76 -2.3 -5.41941 | gap 1, opp_overlap 341976 341978, overlap 341978 ACTTTTGAAAAAAAT GA-TGCAAGT TCT ACTAGCAGTC TTTTTCTTTGGTTTG cbpF 341956 - 342972 + | choline-binding protein F TERM 428 342987 - 343004 + F 86 -5.5 -5.61596 | opp_overlap 342981 ATGAAAGAAGCGATT GCGAATG GAAA CAATCGC TTTTTTTGTGAAAAT TERM 429 343661 - 343648 - gf 81 -8.1 -4.17316 | opp_overlap 343649, overlap 343649 AGTGGTTCAAAATAA GGGCA AGGA TGCCC TACCGTTTTTGCATG mvk 343094 - 343972 + | mevalonate kinase TERM 430 344042 - 344054 + GF 71 -7.7 -3.64364 | overlap 344046 AAAAAGAGATGGTGC CTGCT ACT AGCAG TATTTCTCTAACTTT mvd1 343873 - 344907 + | diphosphomevalonate decarboxylase mvaK2 344894 - 345901 + | phosphomevalonate kinase TERM 431 346032 - 346048 + G 71 -3.7 -4.99035 | opp_overlap 346010, overlap 346033 ACAGAGTTTGCTGGT CGAAAGT GGG ACTTTCC TTTTTATATCAATGC fni 345885 - 346895 + | isopentenyl pyrophosphate isomerase TERM 432 346903 - 346889 - f 70 -4.2 -4.82667 | opp_overlap 346889 TGATCAGATGAAAAA GGCG TAACCAG CGCC TTTTTTTCCATCCTC TERM 433 346889 - 346903 + F 83 -4.9 -5.48825 | opp_overlap 346889 TGATCAGATGAAAAA GGCGT AACCA GCGCC TTTTTTTCCATCCTC spr0342 346973 - 347671 + | hypothetical protein hk03 347668 - 348663 + | sensor histidine kinase, putative rr03 348677 - 349309 + | DNA-binding response regulator alkD-truncation 349310 - 349456 + | DNA alkylation repair enzyme, truncation alkD-truncation 349534 - 349788 + | DNA alkylation repair enzyme, truncation alkD-truncation 349807 - 350079 + | DNA alkylation repair enzyme, truncation spr0348 350229 - 350423 + | hypothetical protein TERM 434 350876 - 350862 - g 73 -8.6 -3.77588 | ATTTGACAGGAATAA CTGTGA CTA TCACAG GCTATCCATCATATA cbpG-truncation 350465 - 351121 + | choline binding protein G, truncation cbpG 351246 - 351374 + | choline binding protein G pcpC 351393 - 352277 + | choline-binding protein TERM 435 352446 - 352414 - T 77 -8.5 -3.69734 | opp_overlap 352414 AATAATTTATCCAAA GGATTTAGTTCTGTA CTG CACAGGACTAAGTCC TTTTAGTTTTACCTT TERM 436 352414 - 352446 + T 100 -12.2 -4.69549 | opp_overlap 352414 AATAATTTATCCAAA GGATTTAGTTCTGT ACTGC ACAGGACTAAGTCC TTTTAGTTTTACCTT IS861-truncation 352590 - 352405 - | degenerate transposase (orf2) IS861-truncation 352891 - 352538 - | degenerate transposase (orf2) IS861-truncation 353113 - 353009 - | degenerate transposase (orf2) IS861-truncation 353614 - 353339 - | degenerate transposase (orf1) TERM 437 353557 - 353603 + g 83 -11.8 -3.26471 | opp_overlap 353560, overlap 353560 353562 353597 TTAATTTCATAATAA AAACACCCCAAAAGTTAGAT TTTTTCT GTCTAACTTTTGGGGTGTAG TTCATGTACACCTGA TERM 438 353600 - 353560 - G 100 -17.2 -5.19328 | opp_overlap 353560 353557 353562 353597 ATTTCATAATAAAAA CACCCCAAAAGTTAGA TTTTTTCTG TCTAACTTTTGGGGTG TAGTTCATGTACACC TERM 439 353560 - 353600 + g 100 -17.9 -2.81547 | opp_overlap 353560, overlap 353557 353562 353597 ATTTCATAATAAAAA CACCCCAAAAGTTAGAT TTTTTCT GTCTAACTTTTGGGGTG TAGTTCATGTACACC TERM 440 353562 - 353598 + g 100 -14.7 -2.95521 | opp_overlap 353560, overlap 353560 353557 353597 TTCATAATAAAAACA CCCCAAAAGTTAGAT TTTTTCT GTCTAACTTTTGGGG TGTAGTTCATGTACA TERM 441 353703 - 353669 - H 70 -8 -3.15324 | opp_overlap 353668 353659 353673 353699, overlap 353668 353672 353673 353699 CAGCCTCATCAAAAG TAATGTTTTGACACAA AAT CTGTGACAAAACTTTA GTTTTAAAGGTTTTT TERM 442 353673 - 353699 + H 81 -8.1 -4.20136 | opp_overlap 353672 353669 353668 353673, overlap 353668 353659 CTCATCAAAAGTAAT GTTTTGACACA AAATC TGTGACAAAAC TTTAGTTTTAAAGGT mtlA 353760 - 355529 + | PTS system, mannitol-specific IIBC components TERM 443 355616 - 355583 - g 72 -9.7 -3.05496 | opp_overlap 355589, overlap 355580 355588 CGAGAAGAACAATTA TTGAAGGCTTTCCTA CATG TAGGGAAGCTTTCAA TGCAAGATATGACTG TERM 444 355589 - 355610 + G 79 -9.5 -3.6502 | opp_overlap 355588 355583 355580 GAACAATTATTGAAG GCTTTCCTA CATG TAGGGAAGC TTTCAATGCAAGATA spr0357 355553 - 357508 + | transcriptional regulator mtlF 357510 - 357947 + | mannitol-specific enzyme IIA component mtlD 358009 - 359145 + | mannitol-1-phosphate 5-dehydrogenase TERM 445 359204 - 359216 + F 71 -7.7 -3.58905 | CTTAGGCATATGTTA CTGAC TTC GTCAG TTCTATCTACAACCT TERM 446 359249 - 359229 - f 72 -8.3 -3.35996 | opp_overlap 359246, overlap 359230 CAGTTCTATCTACAA CCTCAAAGC AGT GCTTTGAGC TGACTCCGTCAGTCT TERM 447 359248 - 359230 - f 84 -11.8 -2.61383 | opp_overlap 359246, overlap 359229 AGTTCTATCTACAAC CTCAAAGC AGT GCTTTGAG CTGACTCCGTCAGTC spr0360 359316 - 359474 + | hypothetical protein TERM 448 359457 - 359467 + F 74 -5.4 -4.75404 | TTATTGGATTTTCTC CTCA GAT TGAG TTTTTGATCAGCTTT spr0361 359527 - 359640 + | hypothetical protein tig 359944 - 361227 + | trigger factor TERM 449 361269 - 361238 - T 100 -17.5 -4.22591 | opp_overlap 361245, overlap 361245 AATAATCTTAATAAA CAGAAAACCCACC TGAATT GGTGGGTTTTCTG ATGCACTATTTTCCA TERM 450 361245 - 361262 + T 84 -8.4 -4.46926 | opp_overlap 361245 361238 TTAATAAACAGAAAA CCCACC TGAATT GGTGGG TTTTCTGATGCACTA TERM 451 361262 - 361245 - T 90 -8.4 -4.89838 | opp_overlap 361245, overlap 361238 TTAATAAACAGAAAA CCCACC TGAATT GGTGGG TTTTCTGATGCACTA recD 363641 - 361275 - | exonuclease V TERM 452 361325 - 361341 + g 88 -8.7 -4.72029 | TAATCCCAATCATGG CTGGGAT GCG GTCCCAG TTTTCTTCGGTTAGG TERM 453 363865 - 363838 - R 79 -8.4 -3.9093 | opp_overlap 363838 CTCACGATAGAAGAA GAGGCTGAGATT GGTG ATTCTCGGCCTC TTAGGTTTCTTAAAA TERM 454 363838 - 363865 + r 85 -10.6 -3.37761 | opp_overlap 363838 CTCACGATAGAAGAA GAGGCTGAGATT GGTG ATTCTCGGCCTC TTAGGTTTCTTAAAA spi 364489 - 363875 - | signal peptidase I TERM 455 364108 - 364141 + g 88 -11.1 -4.02022 | AAGTTCCTTTATTTC CTTCAAAGCCCTTGC CTGA GTAAGTGCTTTGGAG TTTGTCATCCTTGAA rnhB 365373 - 364501 - | ribonuclease HIII spr0366 365451 - 365762 + | hypothetical protein spr0367 365759 - 366307 + | hypothetical protein TERM 456 366331 - 366311 - f 88 -7.6 -4.87786 | gap 1, opp_overlap 366311 TTAATCGGATAAAAA GGGC-AGGA GTTT TCCTAGCCC TTTGTTTACAGATTT TERM 457 366311 - 366331 + F 81 -7.6 -4.4448 | gap 1, opp_overlap 366311 TTAATCGGATAAAAA GGGC-AGGA GTTT TCCTAGCCC TTTGTTTACAGATTT TERM 458 366637 - 366622 - g 73 -7.6 -4.00348 | TCTCAACTAAGGAAA TTGCAG GAGT CTGCAA GAGGTTGGAGATGGG mutS2 366411 - 368747 + | MutS2 family protein TERM 459 369031 - 369055 + F 100 -10.1 -4.68655 | opp_overlap 369036 TATCTAAGCATTCCA GAGTACATGTA TCT TGCATGTGCTC TTTCTTTTGGGGTTG TERM 460 369460 - 369431 - g 95 -12.9 -3.72576 | CTCTTGGCCATCAAA TACCGCACCAAGG ACGA CCATGGTGCAGTA GCGGGAGGTCCCATG TERM 461 369515 - 369505 - g 76 -6.8 -4.40358 | opp_overlap 369505 369508 AGGGATGGGAGAAAA GTGG CGA CCAC TTGCTGTTTTGTTTG TERM 462 370240 - 370250 + G 70 -3.2 -4.93296 | TCGCTTTATCTGGCT CTAC CGT GTGG TTTTTGTGCTCATGG dagA 369089 - 370411 + | sodium:alanine symporter family protein TERM 463 370417 - 370433 + F 87 -6.6 -5.50499 | opp_overlap 370417 TGACAAATAATGGAA TCACAC AGCTC GTGTGA TTTTTTTGCCTATAA TERM 464 370851 - 370837 - g 79 -10 -3.55622 | opp_overlap 370843 GTGAAGTGGTGCAAA TCACGG CAG CCGTGA CCAATGGTTGTGCCT mip 370629 - 371177 + | hypothetical protein TERM 465 371195 - 371219 + F 82 -4.3 -5.48825 | opp_overlap 371196, overlap 371196 CATATCTGAGTAAAA TGAAGTCTG AAATAAG CGGACTTCG TTTTTTTAAATCCTC shetA 371275 - 372186 + | exfoliative toxin, putative TERM 466 372177 - 372206 + T 87 -6.5 -5.42265 | opp_overlap 372180, overlap 372180 GATTTGGTTACGAAA AAAGGTCTAGCTA GAAA TAGCTAAACCTTA TTTTTTATGGTTTGA TERM 467 372180 - 372203 + T 86 -8.2 -4.75967 | opp_overlap 372180, overlap 372177 TTGGTTACGAAAAAA GGTCTAGCTA GAAA TAGCTAAACC TTATTTTTTATGGTT TERM 468 372203 - 372180 - T 100 -10.4 -5.14563 | opp_overlap 372180 372177 TTGGTTACGAAAAAA GGTCTAGCTA GAAA TAGCTAAACC TTATTTTTTATGGTT serS 373485 - 372211 - | seryl-tRNA synthetase spr0373 374069 - 373698 - | hypothetical protein lysC 375436 - 374072 - | aspartate kinase TERM 469 374492 - 374476 - G 70 -8.7 -3.27525 | opp_overlap 374476 374474 TGCGGCCAAATCCAA CCTCACG GTT CATGAGG TATTTCGACATGTTA TERM 470 375539 - 375561 + H 100 -9.2 -5.59655 | AGCGAGCCTTTCTTA TCGGCTGAGA CAC TTTCAGTCGA TTTTTTCTTGCTTTC phaB 375761 - 376546 + | enoyl-CoA hydratase spr0376 376640 - 377074 + | hypothetical protein fabH 377074 - 378048 + | 3-oxoacyl-(acyl carrier protein) synthase III acpP 378108 - 378332 + | acyl carrier protein TERM 471 378371 - 378350 - f 72 -8 -3.47709 | opp_overlap 378350 378347 AGAATATTAGTAGAA GGAGTAGG GAGAAA CCCACTCC CTCTTGTTTAGGTAA fabK 378451 - 379425 + | enoyl-acyl carrier protein(ACP) reductase fabD 379418 - 380338 + | acyl-carrier-protein S-malonyltransferase fabG 380372 - 381103 + | 3-ketoacyl-(acyl-carrier-protein) reductase fabF 381116 - 382360 + | 3-oxoacyl-(acyl carrier protein) synthase II accB 382363 - 382848 + | acetyl-CoA carboxylase biotin carboxyl carrier protein subunit TERM 472 382986 - 382952 - g 83 -7.2 -4.72272 | opp_overlap 382953, overlap 382953 TGTTGCTATCAAAAA TGTGACCATTAACGAA CCT TTCTTTAACGGCCACT TTCCTCAATACCCAG TERM 473 382985 - 382953 - g 80 -10.7 -3.43042 | opp_overlap 382953, overlap 382952 GTTGCTATCAAAAAT GTGACCATTAACGAA CCT TTCTTTAACGGCCAC TTTCCTCAATACCCA fabZ 382845 - 383267 + | (3R)-hydroxymyristoyl-ACP dehydratase accC 383279 - 384646 + | acetyl-CoA carboxylase biotin carboxylase subunit TERM 474 384767 - 384749 - g 79 -6.6 -4.65895 | TCGGTTAGGGAAAAA CCTCAAGC TAA GCCAGAGG TTCCAGATGAATTAT TERM 475 384959 - 384945 - g 80 -10 -3.67792 | opp_overlap 384944 384945 TTACAGGGATTGAAA GCAAGG ATC CCTTGC ATTTCCCTGGTTACC TERM 476 384945 - 384959 + G 73 -10 -2.82595 | opp_overlap 384945, overlap 384944 TTACAGGGATTGAAA GCAAGG ATC CCTTGC ATTTCCCTGGTTACC accD 384683 - 385549 + | acetyl-CoA carboxylase subunit beta TERM 477 386241 - 386230 - g 73 -5.8 -4.62085 | AGTGTCAAAAAAGAA CTCC AAAC GGAG CTGGCTAGACTTTCA accA 385546 - 386313 + | acetyl-CoA carboxylase subunit alpha TERM 478 386325 - 386343 + F 82 -5.3 -5.24129 | opp_overlap 386325 CTAAGAATGACTAAA TGAGACT AGAAA GGTCTCA TTTTTTATGGAAAAA spr0388 386472 - 386657 + | hypothetical protein TERM 479 387095 - 387117 + G 70 -7.8 -3.68351 | opp_overlap 387086, overlap 387098 AGGAGACTCTTGATA GAGGGTATTT TAT GAATACCTTC TTTCCCTAGTCCAAG spr0389 386914 - 387126 + | hypothetical protein TERM 480 387202 - 387233 + T 71 -3.1 -5.05153 | CTATCTCACAGAGAT CCAATTAGTTTAT TATATT ATAGTCTGATTGG TTTCTTTTTTGCCCT TERM 481 387381 - 387426 + T 100 -11.5 -4.10144 | opp_overlap 387393, overlap 387393 TTTTAGATAGTGGGA GGCAAAGAAAAAGTGTTTGAT AGAT ATCAAACACTTTTTCTTTTTA TTGTTCTTCTGTTAC TERM 482 387393 - 387414 + T 100 -10.3 -5.74684 | opp_overlap 387393, overlap 387381 GGAGGCAAAGAAAAA GTGTTTGAT AGAT ATCAAACAC TTTTTCTTTTTATTG TERM 483 387414 - 387393 - T 100 -10.3 -5.30616 | opp_overlap 387381 387393 GGAGGCAAAGAAAAA GTGTTTGAT AGAT ATCAAACAC TTTTTCTTTTTATTG nusB 387864 - 387424 - | transcription antitermination protein NusB spr0391 388228 - 387839 - | hypothetical protein efp 388810 - 388250 - | elongation factor P TERM 484 388935 - 388905 - R 75 -8.5 -3.48924 | gap 1, opp_overlap 388905 388907 388912, overlap 388912 GGAGTTGGTAGAGAA GAA-AAAACCAACC TTAG GGCTGGTTTTGTTC TGTCTAGTTTTCTTT TERM 485 388927 - 388912 - R 89 -6.8 -5.60689 | opp_overlap 388907 388905 388912, overlap 388905 GTAGAGAAGAAAAAA CCAACC TTAG GGCTGG TTTTGTTCTGTCTAG TERM 486 388912 - 388927 + r 73 -4.6 -4.87592 | opp_overlap 388912 388905, overlap 388907 388905 GTAGAGAAGAAAAAA CCAACC TTAG GGCTGG TTTTGTTCTGTCTAG gatB 390381 - 388939 - | aspartyl/glutamyl-tRNA amidotransferase subunit B gatA 391847 - 390381 - | aspartyl/glutamyl-tRNA amidotransferase subunit A gatC 392149 - 391847 - | aspartyl/glutamyl-tRNA amidotransferase subunit C prfC 392362 - 393906 + | peptide chain release factor 3 TERM 487 393938 - 393921 - f 79 -8.5 -3.75292 | opp_overlap 393921 393920 393903 ACTCAGTACCAACAA TTGGAAC TAAA GTTCCAA ATTGTTGGACGCTAG spr0397 394175 - 394660 + | hypothetical protein rpmB 394776 - 394964 + | 50S ribosomal protein L28 TERM 488 394981 - 394992 + F 93 -5.8 -5.92399 | opp_overlap 394974 394968 394981, overlap 394968 AATAAAAGCAAAGGA GACC TTAG GGTC TTTTTTCTTTTATTG asp23 395121 - 395486 + | hypothetical protein TERM 489 396238 - 396267 + G 76 -7.3 -4.1899 | gap 1 TGAAATCATGGTAGC TCTTAAGCA-AGGT CCA ACCTATGCTAAAGA TTTTGACTACGATGA spr0400 395489 - 397156 + | hypothetical protein TERM 490 397167 - 397184 + F 100 -6.3 -6.04324 | opp_overlap 397167 397170 AATAAGATTAATGAA GGACTGA GAAA TCAGTTC TTTTTTCTTTTTTAG TERM 491 397257 - 397236 - f 82 -3.1 -5.74684 | TAATAAAAACAAAAA TAACATTCA TAAA TAAACGTTA AAATAGAAAATTCAG TERM 492 397969 - 397955 - gf 70 -7.2 -3.74158 | CGAATGATATGCAAA TCAAGA AAA TCTTGA AGCAATTGTCCAAGG ilvB 397357 - 399057 + | acetolactate synthase catalytic subunit ilvH 399026 - 399526 + | acetolactate synthase 3 regulatory subunit ilvC 399592 - 400614 + | ketol-acid reductoisomerase spr0404 400691 - 400957 + | hypothetical protein spr0405 401195 - 401551 + | hypothetical protein TERM 493 401583 - 401552 - f 87 -10.4 -3.7732 | opp_overlap 401560, overlap 401553 401560 TTCGGAGATGAATAA CTAAAAAACAGTCA TTAG TGACTGTTTTTTAT AGAAAAAGAGGTTTT TERM 494 401582 - 401553 - f 89 -13.9 -2.86071 | opp_overlap 401560, overlap 401552 401560 TCGGAGATGAATAAC TAAAAAACAGTCA TTAG TGACTGTTTTTTA TAGAAAAAGAGGTTT TERM 495 401560 - 401575 + F 89 -7.6 -5.24129 | opp_overlap 401553 401552 401560 TGAATAACTAAAAAA CAGTCA TTAG TGACTG TTTTTTATAGAAAAA TERM 496 401575 - 401560 - f 89 -7.6 -5.37865 | opp_overlap 401560, overlap 401553 401552 TGAATAACTAAAAAA CAGTCA TTAG TGACTG TTTTTTATAGAAAAA ilvA 401601 - 402851 + | threonine dehydratase TERM 497 403747 - 403732 - g 78 -2.6 -5.46698 | overlap 403734 TGCAAAAGTAAAAAA TATTTC ATTT GAAACA GCCTTAGGCCTAATT spr0407 403586 - 403801 + | hypothetical protein TERM 498 403901 - 403881 - T 74 -5.4 -4.82667 | opp_overlap 403883 403889 TGAGGACAGCAAAAA GACTGCAC GGTTG ATGCAGCC TTTTCTTTTTATTTG TERM 499 403889 - 403901 + T 84 -5.5 -5.48028 | opp_overlap 403881, overlap 403883 GCAAAAAGACTGCAC GGTTG ATG CAGCC TTTTCTTTTTATTTG glnQ 404650 - 403910 - | amino acid ABC transporter ATP-binding protein glnH 405585 - 404650 - | ABC transporter substrate binding protein - glutamine transport TERM 500 407096 - 407067 - g 83 -5.1 -5.27938 | opp_overlap 407067 407092 ATCGTTAAAGAAAAA GATCAAAGTAAAC AACT ACTTACTTGGATC TTCCCTTCGATCCTT TERM 501 407635 - 407650 + G 72 -9 -3.31558 | GAAAACGAGTTTCCT TCTGGG GGCT CCCAGA TTACTATCGTCCTTT TERM 502 407787 - 407797 + G 70 -5.4 -4.43189 | CTTTACCTCCCTTTG CCAA TAC TTGG TTTTCTAGGGTTAGT spr0410 406350 - 408242 + | hypothetical protein transposase_F 408400 - 408239 - | hypothetical protein transposase_F 409090 - 408542 - | degenerate transposase TERM 503 408836 - 408800 - G 83 -12.3 -2.50994 | opp_overlap 408803, overlap 408799 408834 CCCAATCCCAGTAAC CGTCGTGATGGCCGAGT TGA ACTCAGCCATCAAGTCA TTGACACATGTTTCC TERM 504 408803 - 408833 + g 83 -12.6 -2.72227 | opp_overlap 408800 408799 AATCCCAGTAACCGT CGTGATGGCCGAGT TGA ACTCAGCCATCAAG TCATTGACACATGTT uppP 409666 - 410511 + | undecaprenyl pyrophosphate phosphatase TERM 505 410513 - 410546 + T 84 -11.9 -2.74192 | opp_overlap 410518, overlap 410518 GTTTATTTGTATAAG AAAAACCTTGAAGGG GCAA CTCTTCAAGGTTTTA TACTCTTAGAAAATC TERM 506 410541 - 410518 - T 100 -9.6 -5.18726 | opp_overlap 410518 410513 TTTGTATAAGAAAAA CCTTGAAGGG GCAA CTCTTCAAGG TTTTATACTCTTAGA TERM 507 410518 - 410541 + T 100 -11.8 -4.55023 | opp_overlap 410518, overlap 410513 TTTGTATAAGAAAAA CCTTGAAGGG GCAA CTCTTCAAGG TTTTATACTCTTAGA dinP 411727 - 410657 - | DNA polymerase IV TERM 508 410866 - 410896 + g 83 -4.9 -5.27399 | GTTGATGTAGATTGA GAGC-GACTTTTTCT GAT AGAAGA-GTCAGCTC TTTTTTGATATCTTC TERM 509 411657 - 411678 + g 74 -3.7 -5.06816 | opp_overlap 411657 411658 411660, overlap 411658 411676 ACCGCAGCAAAAAAG GCATCCATG TCAA TATGGATGA TTTTTCTTGACAAAT TERM 510 411797 - 411815 + H 81 -9.6 -3.35597 | overlap 411780 411800 TCAAAACAGTATTTT GAGCTGAC TTC GTCAGTTC TATTTACAACCTCAA TERM 511 411800 - 411812 + H 73 -7.7 -3.81755 | overlap 411797 AAACAGTATTTTGAG CTGAC TTC GTCAG TTCTATTTACAACCT TERM 512 411845 - 411825 - H 72 -8.3 -3.35996 | opp_overlap 411844, overlap 411826 411832 CAGTTCTATTTACAA CCTCAAAGC AGT GCTTTGAGC AGCCTGCGGCTAGCT TERM 513 411844 - 411826 - H 84 -11.8 -2.61383 | overlap 411825 411832 AGTTCTATTTACAAC CTCAAAGC AGT GCTTTGAG CAGCCTGCGGCTAGC TERM 514 413979 - 413965 - g 74 -6.4 -4.44046 | CTTACTCTAAACAAA CTGGTA ACT CACCAG TTCACAAAGGTGTAT pfl 412113 - 414437 + | formate acetyltransferase TERM 515 414464 - 414485 + T 100 -12.3 -4.54821 | opp_overlap 414464 414460 AATAATGAAAAGGAA CCCTCGGTC AATC GACTGAGGG TTTTGTGCTTGGGAT TERM 516 414485 - 414464 - T 83 -10.1 -3.78229 | opp_overlap 414464, overlap 414460 AATAATGAAAAGGAA CCCTCGGTC AATC GACTGAGGG TTTTGTGCTTGGGAT spr0416 415151 - 414804 - | hypothetical protein spr0417 415633 - 415349 - | hypothetical protein TERM 517 415428 - 415467 + g 70 -3.1 -5.00616 | overlap 415431 415431 GAAATCACATATTTA TGAG-TTGGAGTATGCTCT TGAA AG-GCATACTTCAAGCTAA TTTTTTGAAAACGGG spr0418 416025 - 416195 + | hypothetical protein spr0419 416416 - 416246 - | hypothetical protein TERM 518 416964 - 416988 + r 74 -6.4 -4.33487 | overlap 416961 TCAACATAGCGAGAA GGCGGTTTCC TATAT GGAAGTCGTC TTGTTTTCATATTGT xylR 418291 - 417068 - | ROK family protein TERM 519 418386 - 418371 - H 91 -2.6 -6.04953 | overlap 418373 ATACAAAGAAAAAAA TATTGT AAAA ACAACA AAAAATATATTGACA TERM 520 418525 - 418513 - gH 82 -7.7 -4.56597 | CCGTTTGGTGAAAAA GTTGG CAA CCAAC GGCATTTGAAAGCTA PTS-EII 418456 - 419781 + | PTS system, cellobiose-specific IIC component spr0422 419729 - 421669 + | hypothetical protein PTS-EII 421837 - 422181 + | PTS system, lactose-specific IIA component lacG 422191 - 423603 + | 6-phospho-beta-galactosidase PTS-EII 423672 - 425351 + | phosphotransferase system sugar-specific EII component TERM 521 425469 - 425440 - T 100 -16.7 -3.9644 | opp_overlap 425440 TTTTTAATATAAGAA TCCCTCTTTTTAC AATT GTAAAAAGAGGGA TTTTGTATTTTATCT TERM 522 425440 - 425469 + T 100 -16.7 -4.95843 | opp_overlap 425440 TTTTTAATATAAGAA TCCCTCTTTTTAC AATT GTAAAAAGAGGGA TTTTGTATTTTATCT trkH 426918 - 425479 - | Trk transporter membrane-spanning protein - K+ transport trkA 428271 - 426922 - | potassium transporter peripheral membrane component TERM 523 427596 - 427608 + g 70 -7.7 -3.64609 | CGATGAGAAGGCTCT TCACG GCG CGTGA TTTAAAATAATTATG TERM 524 429176 - 429186 + G 71 -6.8 -3.96483 | opp_overlap 429176 429175 TGCAGATGTGAGAAT TGGG CAA CCCA TTCTTTACATCAACT spr0428 428433 - 429308 + | hypothetical protein TERM 525 429479 - 429489 + G 71 -6.8 -4.09292 | TCTATTATTTTTGGA CCGA TTA TCGG TTTGCTTGTTGGGTT spr0429 429323 - 429871 + | hypothetical protein TERM 526 429919 - 429937 + F 78 -10.4 -2.61383 | overlap 429918 GTTAGCCGCAGGTTG CTCAAAAC AGT GTTTTGAG GTTGTAGATGAAACT TERM 527 429963 - 429951 - f 73 -7.7 -3.83205 | AGGTTGTAGATGAAA CTGAC GAA GTCAG TAACCATACCTACGG ABC-NBD 430192 - 431874 + | ABC transporter ATP-binding protein TERM 528 432083 - 432093 + G 70 -5.4 -4.34345 | overlap 432073 TGCGACGGTATTTGC CGTT TTA AACG TTTTGATGGTCTATC ABC-MSD 431859 - 432689 + | hypothetical protein cspR 432843 - 433385 + | rRNA methylase TERM 529 433428 - 433411 - f 77 -5.5 -4.89562 | opp_overlap 433411 433412, overlap 433406 433412 TGAAAATGAACAAAA TGCTTGC GCTT GCAAGCG TTTTTTGTTATGATA TERM 530 433411 - 433428 + F 93 -7.7 -5.58179 | opp_overlap 433411 433406 433412, overlap 433412 TGAAAATGAACAAAA TGCTTGC GCTT GCAAGCG TTTTTTGTTATGATA TERM 531 433412 - 433427 + F 82 -9 -3.9328 | opp_overlap 433412 433411 433406, overlap 433411 GAAAATGAACAAAAT GCTTGC GCTT GCAAGC GTTTTTTGTTATGAT TERM 532 433427 - 433412 - f 75 -9 -3.5211 | opp_overlap 433411 433412, overlap 433411 433406 GAAAATGAACAAAAT GCTTGC GCTT GCAAGC GTTTTTTGTTATGAT spr0433 433829 - 434407 + | hypothetical protein TERM 533 434426 - 434439 + G 84 -8.1 -4.72729 | opp_overlap 434426 AACATTTTTAATGAA GGGCA GTTT TGCCC TTTTACTTTTCGTTA TERM 534 434607 - 434620 + G 70 -3.1 -4.94487 | overlap 434577 GTGATTATCACTTGG GTTGT CATT ACAGC TTTTGTCTTTTATCG TERM 535 434859 - 434849 - g 79 -5.4 -4.93547 | TCAACGAATTAAAAA TCCA GTC TGGA GAAAAATCGTACAAA spr0434 434397 - 435047 + | PAP2 family protein spr0435 435075 - 435464 + | hypothetical protein spr0436 435469 - 435918 + | hypothetical protein rpoE 436046 - 436633 + | DNA-directed RNA polymerase subunit delta TERM 536 436701 - 436725 + F 93 -7.1 -5.75538 | overlap 436698 436703 CTCTTTTAGAGGTCG GGGCTCCCTAG TTC TTAGGGAGCTA TTTTTGTTTTTTCAA TERM 537 436703 - 436723 + F 100 -11.9 -4.48934 | overlap 436698 436701 CTTTTAGAGGTCGGG GCTCCCTAG TTC TTAGGGAGC TATTTTTGTTTTTTC TERM 538 436736 - 436757 + F 74 -5.9 -4.4767 | overlap 436738 AGCTATTTTTGTTTT TTCAAGAAG TTAT CTTCTTGTA TTTTATACTCAATGA TERM 539 436738 - 436755 + F 79 -8.5 -3.84585 | overlap 436736 CTATTTTTGTTTTTT CAAGAAG TTAT CTTCTTG TATTTTATACTCAAT TERM 540 436810 - 436828 + F 78 -10.4 -2.61383 | overlap 436809 ACTAGCCGTAGGCTG CTCAAAAC ACT GTTTTGAG GTTGTAGATAAGACT TERM 541 437418 - 437402 - g 81 -2.9 -5.63517 | CTTTGAAAGAAAAAA TCAAGCG TGC CGCTCTA ACGACCGACTCTGAT pyrG 437023 - 438630 + | CTP synthetase TERM 542 438642 - 438663 + T 100 -9.5 -5.09225 | opp_overlap 438642 TTAGCAAAATCAGAA CCTTTGAGA AAAA TCTCAGAGG TTTTTTGCATACGAT TERM 543 439185 - 439149 - T 70 -4.5 -4.72272 | opp_overlap 439149 439150 439153 439156, overlap 439153 439156 CTTGCTTAGGAAAAA GTAAGAAGCCATCCA ATTATGA TGGATAGCTTCTTGG TTATTAGATTTGTTC TERM 544 439181 - 439153 - T 83 -9.7 -3.84901 | opp_overlap 439150 439149 439153 439156, overlap 439149 439156 CTTAGGAAAAAGTAA GAAGCCATCCA ATTATGA TGGATAGCTTC TTGGTTATTAGATTT TERM 545 439153 - 439181 + T 71 -7.5 -3.56576 | opp_overlap 439153 439149 439156, overlap 439150 439149 439156 CTTAGGAAAAAGTAA GAAGCCATCCA ATTATGA TGGATAGCTTC TTGGTTATTAGATTT spr0439 440820 - 439189 - | hypothetical protein TERM 546 444852 - 444830 - g 76 -3.5 -5.28942 | TACCTCAAACAAAAA TTAGCAG AAGTTGAAG CTGCTAA GAACAAGGTGGTCTA spr0440 441113 - 446092 + | endo-beta-N-acetylglucosaminidase, putative pgk 446182 - 447378 + | phosphoglycerate kinase TERM 547 447399 - 447426 + F 81 -7.8 -4.42238 | opp_overlap 447399, overlap 447404 TATAAACAAATCAAA GAAGAGAGGGAT GAGA GTTCCTCTTTTC TTTTGCTTAAAATAA TERM 548 447404 - 447421 + F 76 -4.1 -5.18643 | opp_overlap 447399, overlap 447399 ACAAATCAAAGAAGA GAGGGAT GAGA GTTCCTC TTTTCTTTTGCTTAA spr0442 447514 - 448041 + | hypothetical protein TERM 549 448061 - 448039 - f 100 -7.2 -5.8096 | opp_overlap 448039 448042 GAGAAAAAAGAAAAA TAATGTTACA TTT TATAACATTA TCAATTGACGTTTGT glnR 448118 - 448474 + | transcriptional repressor of the glutamine synthetase gene glnA 448511 - 449857 + | glutamine synthetase, type I TERM 550 449938 - 449955 + F 83 -6.3 -4.85782 | opp_overlap 449938 CTATAACCCTTAAAA TAGCGAT TTCG GTCGCTA TTTATTTTTCGAAAA TERM 551 450518 - 450533 + F 95 -9 -5.04175 | AACCCATTATCTATA GGCGTA TTTT TACGCC TTTTTATATACTTGA hsdS 450637 - 451917 + | type I restriction-modification system S subunit hsdS 452470 - 451871 - | type I restriction-modification system S subunit TERM 552 452448 - 452476 + g 93 -11.1 -5.055 | opp_overlap 452448 452451 CCATAATCACAAAAA TAGCAGGTAGTCA GTT TGACCACCTGTTA TTTTTTACCAATTAA TERM 553 452476 - 452448 - G 93 -11.1 -5.01535 | opp_overlap 452448, overlap 452451 CCATAATCACAAAAA TAGCAGGTAGTCA GTT TGACCACCTGTTA TTTTTTACCAATTAA TERM 554 452473 - 452451 - G 84 -12.8 -3.05709 | opp_overlap 452448, overlap 452448 TAATCACAAAAATAG CAGGTAGTCA GTT TGACCACCTG TTATTTTTTACCAAT xerD 453278 - 452481 - | integrase/recombinase hsdS 454903 - 453335 - | type I restriction-modification system S subunit hsdM 456366 - 454903 - | type I restriction-modification system, M subunit TERM 555 455984 - 456001 + g 84 -7 -4.84274 | opp_overlap 455958 ATAACATTGATGACT TGGCGT AACAAG ACGCCA TTTTTCATATAGTTG hsdR 458712 - 456379 - | type I restriction-modification system R subunit spr0451 459085 - 459285 + | hypothetical protein spr0452 459320 - 459829 + | hypothetical protein TERM 556 459857 - 459883 + F 100 -15.4 -5.30575 | TCTTCAGATTGATTT TTAGCACTCTTT ATA AAAGAGTGCTAA TTTTTTGAGTTTTTG TERM 557 460152 - 460140 - g 70 -3.4 -4.98255 | opp_overlap 460151 GCGGAACTAGAAAAA CAAG GGTTG CTTG AGAAGGCTCATACTT TERM 558 460544 - 460554 + G 73 -6.8 -4.28656 | TCAGGAACGTTTCCT CGGT CAC ACCG TTTTAGATATTCACT hrcA 459960 - 461027 + | heat-inducible transcription repressor grpE 461030 - 461578 + | heat shock protein GrpE TERM 559 461641 - 461627 - f 73 -8.6 -3.20858 | TAGGAGATTGACGAA GTGTTC GAT GAACAC AAGAAAATCTATCTT TERM 560 461987 - 461967 - f 73 -8.3 -3.67588 | overlap 461979 CAAAGTTTAGTCAAA GAGATTGAC GAA GTCAAGCTC TGACGGCGTCGCCAC dnaK 462058 - 463881 + | molecular chaperone DnaK TERM 561 464316 - 464338 + F 100 -9.9 -4.65895 | TAATTTACTTATTTG CAGAGGTTG CAACC CAGCCTCTG TTTTTCGATAAAAAG TERM 562 464723 - 464709 - g 70 -2.8 -5.02715 | opp_overlap 464710, overlap 464710 AGACGAAATCAAAAA GGCTTA TCG TAAGCT TTCCAAAAAATATCA TERM 563 465744 - 465718 - g 89 -4.4 -5.67283 | opp_overlap 465718, overlap 465706 AATCCAAAGAAAAAA GGCTTCTTTGAC CAT ATTAAAGATGCC TTTGATGGAGAATAA dnaJ 464641 - 465759 + | heat-shock protein (activation of DnaK) TERM 564 466071 - 466096 + T 73 -9.1 -2.82529 | opp_overlap 466077, overlap 466077 ACTTGTTTACGTTTT AAAAAAGAGCC GGGG GGCTCTTTTTA CTTATCTTCAGTTCC TERM 565 466090 - 466077 - T 90 -8.1 -5.02074 | opp_overlap 466071 466077 TTACGTTTTAAAAAA GAGCC GGGG GGCTC TTTTTACTTATCTTC TERM 566 466077 - 466090 + T 90 -8.1 -4.99056 | opp_overlap 466077, overlap 466071 TTACGTTTTAAAAAA GAGCC GGGG GGCTC TTTTTACTTATCTTC spr0457 466381 - 466094 - | hypothetical protein spr0458 466801 - 466391 - | hypothetical protein ABC-NBD 466869 - 467600 + | ABC transporter ATP-binding protein TERM 567 468113 - 468132 + G 70 -5.8 -4.4572 | gap 1, opp_overlap 468112 468113 TCTCAAGAAAGCAAG CGTAAGCAA GTC TTGCTT-CG TTTCTTTGCCCTCTT ABC-MSP 467597 - 468646 + | ABC transporter permease TERM 568 468671 - 468698 + T 82 -4.2 -5.5112 | gap 1, opp_overlap 468663 TACGACACTAAAAAA GAAGTTGAGTTCA GTC TGT-CTCAGCTTC TTTTTTGTTACTACA blpT 469143 - 468814 - | hypothetical protein blpS 469419 - 469757 + | regulatory protein BlpS TERM 569 470016 - 469986 - g 71 -7.6 -3.87869 | opp_overlap 469986 469988 GGAAGTGGCTAGAAA GATTCGGGAACAAG ACC CTTATGCCCTAATC GTCTTTGTGACGACT TERM 570 470425 - 470403 - g 70 -8.6 -3.31144 | opp_overlap 470407, overlap 470407 GGTGCATTTGGATAA GAAAGAAAAA CTC CTTTTCTTTC CCAATGGTGGAAGCT rr13 469762 - 470499 + | response regulator BlpR TERM 571 470861 - 470881 + G 75 -2.5 -5.2204 | overlap 470866 GGGCAAGGAATTGTA GATGGGGAT GGC AATCCTATC TTTTTATTGATTATG hk13 470513 - 471853 + | histidine kinase TERM 572 471891 - 471861 - T 100 -11.3 -5.39755 | opp_overlap 471861 CAGAATGATAAAAAA CAAGACCGAGA GTTCTTGTT TCTCGGTCTTG TTTTTATAGCTGAAT TERM 573 471861 - 471891 + T 100 -12 -4.88067 | opp_overlap 471861 CAGAATGATAAAAAA CAAGACCGAGAG TTCTTGT TTCTCGGTCTTG TTTTTATAGCTGAAT ip 472050 - 471895 - | peptide pheromone BlpC spr0466 473114 - 472107 - | hypothetical protein spr0467 473468 - 473133 - | hypothetical protein spr0468 475104 - 473479 - | hypothetical protein TERM 574 474515 - 474538 + gr 80 -6 -4.69053 | opp_overlap 474515 AAATAATCTACAAAT TCGCTGTCTA TATT TTGATAGCGA TTTTCTTCACTCGTG spr0469 475642 - 475049 - | hypothetical protein spr0470 475926 - 476159 + | hypothetical protein spr0471 476175 - 476354 + | hypothetical protein blpY 476191 - 476880 + | immunity protein BlpY blpZ 476922 - 477155 + | hypothetical protein TERM 575 477870 - 477845 - g 72 -4.7 -4.82901 | CCTTGCTTATAAAAA GAGCCAAAACC TATG GGTTTCTACTC TAGTCCACATGTTTT pncP 477306 - 477917 + | ABC transporter ATP binding protein - unknown substrate TERM 576 477953 - 477930 - f 74 -6.8 -4.45077 | opp_overlap 477930, overlap 477924 TAAAAATTATGAAAA GGTAAGCA GAAGACGG TGCTTACC TTTTTCAAGCTATAA TERM 577 477930 - 477953 + F 76 -6.8 -4.61231 | opp_overlap 477924 477930 TAAAAATTATGAAAA GGTAAGCA GAAGACGG TGCTTACC TTTTTCAAGCTATAA spr0475 478078 - 478872 + | hypothetical protein trmB 478869 - 479504 + | tRNA (guanine-N(7))-methyltransferase TERM 578 479592 - 479615 + F 87 -11 -3.44146 | opp_overlap 479592 479591 479594 AAGAATATGAAAAGT GAGGCGGGGA AATA TCTTCGCCTC TTGCTTATGAGGAGG spr0477 479630 - 480109 + | hypothetical protein nusA 480153 - 481289 + | transcription elongation factor NusA spr0479 481311 - 481604 + | hypothetical protein spr0480 481597 - 481896 + | hypothetical protein TERM 579 482073 - 482051 - g 70 -9.8 -2.60032 | opp_overlap 482033, overlap 482050 482049 GTCGCTGCAAAAATT GCTGCCAGCT TTA AGCCTGCAGC TGCTCCGAAAGTAGA TERM 580 482192 - 482180 - g 73 -6.9 -4.29928 | opp_overlap 482180 AAGGAAGAGGCAAAA CCGGC TGA GCCAG TTGCTCCGAAAACAG TERM 581 482382 - 482395 + G 70 -8.1 -3.72695 | opp_overlap 482381 AAGGTCAAAGCAACC GCGAC AATC GTCGC TTTAATGACCAAGCT infB 481913 - 484705 + | translation initiation factor IF-2 TERM 582 484797 - 484826 + F 100 -15.9 -3.53012 | opp_overlap 484791 TCTCAAAAATCCCCT GTGATGGGACTGA TAAA TCAGTTCCATCAC TTTCACCACGGCGAA TERM 583 484926 - 484907 - f 73 -7.8 -3.71291 | opp_overlap 484907, overlap 484905 AAGAAGTTTAAAATA GCTAGGTC TGCT GGCCTAGC TTTTGGTTCAAAGTA TERM 584 484907 - 484926 + F 100 -10 -4.41494 | opp_overlap 484907 484905 AAGAAGTTTAAAATA GCTAGGTC TGCT GGCCTAGC TTTTGGTTCAAAGTA TERM 585 485160 - 485148 - g 84 -6.9 -4.93365 | TCGGATAACCAAAAA GCCCA AAT CGGGC TTGAAAAAGCAACTG rbfA 484929 - 485306 + | ribosome-binding factor A TERM 586 485311 - 485325 + F 100 -11.4 -5.14563 | opp_overlap 485311 ATAAGAACTAAAGAA GAGGGG TTG CCCCTC TTTTTTGGTGGAGGA TERM 587 485325 - 485311 - f 100 -11.4 -4.1648 | opp_overlap 485311 ATAAGAACTAAAGAA GAGGGG TTG CCCCTC TTTTTTGGTGGAGGA spr0483 485549 - 486364 + | hypothetical protein spr0484 486366 - 486548 + | hypothetical protein TERM 588 486730 - 486709 - f 72 -5.9 -4.4017 | gap 1, opp_overlap 486709 CCAAGTCGCAGAAAA CTAGCAG-GA ACT CCACTGCTAG TTTTTTAATCTCTCT TERM 589 486709 - 486730 + F 84 -5.9 -5.25893 | opp_overlap 486709 CCAAGTCGCAGAAAA CTAGCAG GAACTCCA CTGCTAG TTTTTTAATCTCTCT TERM 590 486881 - 486863 - f 78 -10.4 -2.61383 | opp_overlap 486862 486879, overlap 486862 AGTTCTATCCACAAC CTCAAAAC GGT GTTTTGAG CTGACTTCGTCAGTT TERM 591 486879 - 486897 + F 76 -9.6 -2.87931 | opp_overlap 486863 486862, overlap 486862 486882 TCAAAACGGTGTTTT GAGCTGAC TTC GTCAGTTC TATCTACAACCTCAA TERM 592 486882 - 486894 + F 71 -7.7 -3.58905 | overlap 486879 AAACGGTGTTTTGAG CTGAC TTC GTCAG TTCTATCTACAACCT TERM 593 486926 - 486908 - f 78 -10.4 -2.61383 | overlap 486907 AGTTCTATCTACAAC CTCAAAAC ACT GTTTTGAG CAACCTGCGGCTAGC spr0485 486986 - 487231 + | hypothetical protein TERM 594 487251 - 487264 + G 74 -5.3 -4.68103 | opp_overlap 487244 AGATGAACGGATTCA TATCC TACG GGATA TTTTGTTAGAATTGC spr0486 487231 - 488565 + | hypothetical protein spr0487 488575 - 488829 + | hypothetical protein TERM 595 488884 - 488901 + F 82 -4.1 -5.4505 | AATGTTTATGTTAAA TCCTTGT CAGA GCAGGGA TTTTTTATTGAAAGG spr0488 488925 - 489320 + | hypothetical protein TERM 596 489515 - 489499 - f 71 -7.9 -3.5913 | opp_overlap 489498 TTTAAAGACTAAAGA TGCGGGC TTG GCCCGAA ATTGGGTGGTACCGC TERM 597 489546 - 489569 + F 89 -7.4 -5.24647 | overlap 489547 GGATAAACACATTCG TCCCTGTCAT GTAG ATGGCAGGGC TTTTCTTTTGTGTCT TERM 598 489547 - 489568 + F 90 -10.9 -3.72348 | overlap 489546 GATAAACACATTCGT CCCTGTCAT GTAG ATGGCAGGG CTTTTCTTTTGTGTC spr0489 489732 - 490181 + | hypothetical protein spr0490 490168 - 490725 + | hypothetical protein spr0491 490727 - 491689 + | hypothetical protein TERM 599 492486 - 492463 - g 85 -9 -4.183 | gap 1 CCAATCGCTAATAAA CTCATC-CCAA TCG TTGGAGATGAG CACGCAGATCCTGAG TERM 600 494244 - 494218 - g 76 -4.4 -5.00884 | overlap 494219 494222 ATGGTTGGCAAAAAA CTCAGCAACGAA CGC TTCGTCGCCAAC GCTAAACCAGAAGTT TERM 601 494240 - 494222 - g 71 -9.6 -2.92111 | overlap 494219 494218 TTGGCAAAAAACTCA GCAACGAA CGC TTCGTCGC CAACGCTAAACCAGA valS 491701 - 494352 + | valyl-tRNA synthetase TERM 602 494362 - 494378 + F 84 -5.8 -5.23316 | opp_overlap 494354 494362 AAATAAACACAGAAA CACGGT GATGA GCCGTG TTTTTTGGTATAATG spr0493 494407 - 495177 + | hypothetical protein TERM 603 496029 - 496041 + G 70 -3.3 -4.89009 | CGAAGGAAACACTCG GACAG TAA CGGTC TTTTTGATTCAGTAT spr0494 495460 - 496263 + | cell filamentation protein Fic-related protein TERM 604 496388 - 496420 + T 70 -4.2 -4.69549 | AATAATTTATCCGAA GGATTTAGTTCTGT ATTGC ACAAGGCTAAGTCC TTTTAGTTTTACCTT IS861-truncation 496486 - 496379 - | degenerate transposase (orf2) IS861-truncation 496857 - 496468 - | degenerate transposase (orf2) IS861-truncation 497191 - 496934 - | degenerate transposase (orf2) IS861-truncation 497692 - 497417 - | degenerate transposase (orf1) TERM 605 497635 - 497681 + g 83 -11.8 -3.26471 | opp_overlap 497638, overlap 497638 497640 497675 TTAATTTCATAATAA AAACACCCCAAAAGTTAGAT TTTTTCT GTCTAACTTTTGGGGTGTAG TTCATGTACACCTGA TERM 606 497678 - 497638 - G 100 -17.2 -5.19328 | opp_overlap 497635 497638 497640 497675 ATTTCATAATAAAAA CACCCCAAAAGTTAGA TTTTTTCTG TCTAACTTTTGGGGTG TAGTTCATGTACACC TERM 607 497638 - 497678 + g 100 -17.9 -2.81547 | opp_overlap 497638, overlap 497635 497640 497675 ATTTCATAATAAAAA CACCCCAAAAGTTAGAT TTTTTCT GTCTAACTTTTGGGGTG TAGTTCATGTACACC TERM 608 497640 - 497676 + g 100 -14.7 -2.95521 | opp_overlap 497638, overlap 497638 497635 497675 TTCATAATAAAAACA CCCCAAAAGTTAGAT TTTTTCT GTCTAACTTTTGGGG TGTAGTTCATGTACA TERM 609 497846 - 497882 + G 79 -5.3 -5.14985 | gap 1, opp_overlap 497846 497848 TATTCTTGTTATAAT CAGCCTATAGGAATCA AGGAGG TGACTCTTAT-GGCTG TTTTTGTGTCTTTGG spr0499 497816 - 498883 + | hypothetical protein spr0500 498905 - 499246 + | hypothetical protein spr0501 499462 - 499665 + | hypothetical protein spr0502 499631 - 499915 + | hypothetical protein TERM 610 500159 - 500143 - g 71 -7.3 -3.87641 | AAGATGTTTCAGAAA CGACAAG TAG CTTATCG AAAGATGGATTATCG spr0503 499939 - 500571 + | hypothetical protein TERM 611 500794 - 500848 + F 77 -6.1 -4.66537 | gap 2, opp_overlap 500810, overlap 500810 500844 500845 TAATACAAGTGAGCA GGAACCTATTT-AATCACATCA-GAAG AAG TTTCTTGATGTTTTTTAAGTAGGTTCC TTTTATGTTAAAAGG TERM 612 500810 - 500831 + F 71 -3.1 -5.10497 | gap 1, opp_overlap 500810, overlap 500794 GAACCTATTTAATCA CATCA-GAAG AAG TTTCTTGATG TTTTTTAAGTAGGTT licT 500872 - 501711 + | BglG family transcriptional antiterminator TERM 613 502869 - 502857 - g 81 -2.6 -5.63645 | TTAAAATATAAAAAA CCGC TTTAT GCAG CTATGATTGGTGGTG PTS-EII 501729 - 503567 + | PTS system, beta-glucosides-specific IIABC components bglH 503580 - 504995 + | 6-phospho-beta-glucosidase TERM 614 505100 - 505048 - f 83 -9.6 -3.75169 | opp_overlap 505055 505059 505087, overlap 505055 505059 CAGCATCTCATTAAA TATGAAATAAAGAGGTTTGGAA GACATCAAA TTCTAAACCTCTTTATTTTATA GGGGGATTAATTAAT TERM 615 505093 - 505055 - f 76 -7.7 -4.02719 | opp_overlap 505055 505059 505087, overlap 505048 505059 TCATTAAATATGAAA TAAAGAGGTTTGGAA GACATCAAA TTCTAAACCTCTTTA TTTTATAGGGGGATT TERM 616 505055 - 505093 + F 100 -9.9 -4.37658 | opp_overlap 505055 505048 505059, overlap 505059 505087 TCATTAAATATGAAA TAAAGAGGTTTGGAA GACATCAAA TTCTAAACCTCTTTA TTTTATAGGGGGATT TERM 617 505059 - 505089 + F 80 -6.3 -4.77173 | opp_overlap 505059 505055 505048, overlap 505055 505087 TAAATATGAAATAAA GAGGTTTGGAA GACATCAAA TTCTAAACCTC TTTATTTTATAGGGG TERM 618 505512 - 505550 + F 82 -5.3 -5.38839 | gap 1, overlap 505525 TGAAAACGGATGGTA CCGCGTGTCA-ACGCTCC GAGT GGAGTTTTTGGCATGTGG TTTTCTTTTTATCTA TERM 619 505525 - 505536 + F 77 -5.8 -4.65168 | overlap 505512 TACCGCGTGTCAACG CTCC GAGT GGAG TTTTTGGCATGTGGT TERM 620 505632 - 505614 - g 79 -6.7 -4.61824 | GAAGAACAATTAAAA GCGCTTC GCGAA GAAACGC TGACTAGCTTGAAGC TERM 621 505969 - 505939 - g 73 -7.6 -4.03413 | opp_overlap 505933 ACGTTTTGACACAAA CCAGTGAAGAAATC GAA GATATCTTCATCGG TATGGGTTATCAAGT pheS 505587 - 506633 + | phenylalanyl-tRNA synthetase subunit alpha spr0508 506633 - 507142 + | hypothetical protein TERM 622 509594 - 509578 - g 79 -5.1 -5.1287 | overlap 509580 GCTATATGGAAAAAA TCCAAGC ATC GCTCGAA GAAAAAGTCAATGCA pheT 507219 - 509621 + | phenylalanyl-tRNA synthetase subunit beta TERM 623 509673 - 509640 - T 71 -6.7 -4.10566 | opp_overlap 509641 509643, overlap 509641 ATAGTATGATACAAA TTCCCCCTCTAGTTT ATGA ACACTAGAGGGGTGA TTTTATATAAAATAA TERM 624 509641 - 509673 + T 100 -10 -4.54047 | gap 1, opp_overlap 509640 509641, overlap 509643 TAGTATGATACAAAT TC-CCCCTCTAGTTT ATGA ACACTAGAGGGGTGA TTTTATATAAAATAA TERM 625 509673 - 509641 - T 77 -10 -3.05616 | gap 1, opp_overlap 509641 509643, overlap 509640 TAGTATGATACAAAT TC-CCCCTCTAGTTT ATGA ACACTAGAGGGGTGA TTTTATATAAAATAA TERM 626 509643 - 509670 + T 91 -12.8 -3.22094 | opp_overlap 509640 509641, overlap 509641 GTATGATACAAATTC CCCCTCTAGTTT ATGA ACACTAGAGGGG TGATTTTATATAAAA spr0510 510690 - 509689 - | hypothetical protein TERM 627 510958 - 510930 - g 83 -7.5 -4.72772 | opp_overlap 510937, overlap 510931 510935 AAAAAAGAAGGAAAA TCAAATAGAGAAG TTG CCTCTCTACTTGG AAAAGCTCCTCAAAC TERM 628 510957 - 510931 - g 80 -11 -3.40003 | opp_overlap 510937, overlap 510930 510935 AAAAAGAAGGAAAAT CAAATAGAGAAG TTG CCTCTCTACTTG GAAAAGCTCCTCAAA TERM 629 510953 - 510935 - g 77 -8.2 -4.27965 | opp_overlap 510937, overlap 510931 510930 AGAAGGAAAATCAAA TAGAGAAG TTG CCTCTCTA CTTGGAAAAGCTCCT IS1239-truncation 510846 - 511148 + | degenerate transposase IS1239-truncation 511168 - 511296 + | degenerate transposase spr0513 511419 - 511685 + | hypothetical protein TERM 630 511799 - 511822 + F 74 -2.4 -5.54907 | ACAAGCTATACAAAG GATTTGAGAC GTTT GCTTCAAGTC TTTTTCTTTTGTCCG metE 511802 - 514195 + | 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase TERM 631 515071 - 515059 - g 70 -7.7 -3.76482 | CTATACGATGAATAA TGCTG ATA CAGCA AAATACATCCATCAA metF 514259 - 515125 + | 5,10-methylenetetrahydrofolate reductase TERM 632 515136 - 515161 + F 87 -10.5 -3.85504 | opp_overlap 515131 515136, overlap 515155 GATAATAAAAGCAAA CCATTCTTCTC AGGT GAGGGGAATGG TTCCTTTTTAATGGT TERM 633 515161 - 515136 - f 72 -6.1 -4.35361 | opp_overlap 515136 515155, overlap 515131 GATAATAAAAGCAAA CCATTCTTCTC AGGT GAGGGGAATGG TTCCTTTTTAATGGT TERM 634 515155 - 515165 + F 74 -5.4 -4.77036 | opp_overlap 515136 515131, overlap 515136 TCTTCTCAGGTGAGG GGAA TGG TTCC TTTTTAATGGTAAAG TERM 635 515331 - 515369 + F 73 -7.6 -3.74626 | gap 1, opp_overlap 515331, overlap 515322 GAGAGAGTTAGTAAA GCATTTA-GCTAATCGC CCGATA GCGATTAGCGTGAAAGC TTTAGATACTTTAGT TERM 636 515633 - 515618 - f 71 -9 -3.01726 | overlap 515617 TTTTTCTACAGAAAT GTTCGG CAAG CCGAAC CGTCCAAAATATCTT pnpA 515696 - 518023 + | polynucleotide phosphorylase/polyadenylase cysE 518039 - 518656 + | Serine acetyltransferase TERM 637 518795 - 518843 + G 71 -6 -4.24285 | opp_overlap 518799 518802 TGCTTAATTTTGACC CAAACATGCCCGCCTTTTTCCT TTATT ATGAAAAAGGCGAACTTGTTGG TTTATTAACTGTCTA TERM 638 518839 - 518799 - g 79 -9.8 -3.65827 | opp_overlap 518795, overlap 518802 TAATTTTGACCCAAA CATGCCCGCCTTTTTCCT TTATT ATGAAAAAGGCGAACTTG TTGGTTTATTAACTG TERM 639 518836 - 518802 - g 72 -10.1 -2.64144 | opp_overlap 518795, overlap 518799 TTTTGACCCAAACAT GCCCGCCTTTTTCCT TTATT ATGAAAAAGGCGAAC TTGTTGGTTTATTAA spr0518 518668 - 519552 + | hypothetical protein TERM 640 520869 - 520858 - g 83 -7.2 -4.66609 | GACTTGATTCAAAAA CGCC AAGA GGCG CGTGCCAATCGAGAC cysS 519634 - 520977 + | cysteinyl-tRNA synthetase spr0520 520970 - 521356 + | hypothetical protein spr0521 521360 - 522244 + | hypothetical protein TERM 641 522258 - 522284 + F 100 -10.3 -4.96848 | gap 1, opp_overlap 522257 522256 AAAGAAGTTAATATT TGGAGAAGA-GG ATTG CCATCTTCTCCA TTTTTATGTGCAGAG spr0522 522381 - 522836 + | hypothetical protein transposase_H-truncation 523125 - 523298 + | hypothetical protein TERM 642 523432 - 523466 + F 79 -9.3 -3.50953 | opp_overlap 523437, overlap 523437 TTAAACGTGCTATAT CAAAACCAGTCCTTG GAAAA CGTGGACTGGTTTCG TGTTTGGATTATTAC TERM 643 523437 - 523461 + F 76 -7.8 -4.02206 | opp_overlap 523437, overlap 523432 CGTGCTATATCAAAA CCAGTCCTTG GAAAA CGTGGACTGG TTTCGTGTTTGGATT vex1 523650 - 524927 + | peptide ABC transporter permease vex2 524940 - 525587 + | ABC transporter ATP-binding protein vex3 525639 - 527018 + | peptide ABC transporter permease TERM 644 527112 - 527143 + F 89 -8.8 -4.58946 | opp_overlap 527111 527112, overlap 527109 527114 CAATTCAAAATAAAT CCGAAAGCAGTGGT GAAA ATCATTGCTTTCAG TTGTTTTCTTTGTAC TERM 645 527114 - 527141 + F 75 -10 -2.58618 | opp_overlap 527112 527111, overlap 527112 527109 ATTCAAAATAAATCC GAAAGCAGTGGT GAAA ATCATTGCTTTC AGTTGTTTTCTTTGT pep27 527198 - 527281 + | signal peptide TERM 646 527831 - 527815 - g 74 -5.1 -4.67353 | CTATCTAGTGAAAAA TGAAGGC CGG GCCTTGA CTCGGTCTCAGATTA vncR 527330 - 527986 + | VncR, response regulator vncS 527983 - 529311 + | VncS, histidine kinase fba 529452 - 530333 + | fructose-bisphosphate aldolase TERM 647 530358 - 530375 + T 74 -3.3 -5.37593 | opp_overlap 530349 530358 ATAATACAGATAAAA CCTGCCT GTGA GGGTGGG TTTTTTGATTTCAAG TERM 648 530621 - 530644 + T 88 -13.2 -3.0003 | opp_overlap 530621, overlap 530616 TTTGGCTATAAAAAA CTCTCCTGGG AAAT TCCAGGAGAG TATGATTACTTATTT TERM 649 530644 - 530621 - T 100 -12.5 -5.24129 | opp_overlap 530621 530616 TTTGGCTATAAAAAA CTCTCCTGG GAAATT CCAGGAGAG TATGATTACTTATTT spr0531 531856 - 530654 - | oxidoreductase, putative TERM 650 531980 - 531960 - R 100 -10.5 -5.14965 | opp_overlap 531957 ACTCTCATCAAAAAA CTCTCCAAT TGA ACTGGAGAG TGGCTGTTTATACTC glnP 532761 - 532102 - | amino acid ABC transporter permease glnP 533448 - 532771 - | amino acid ABC transporter permease TERM 651 533069 - 533057 - G 77 -7.7 -4.26188 | CTGATATAGGTAAAA CCTTG CGA CAAGG CGGCCTCCATCTGAC glnH 534255 - 533461 - | amino acid ABC transporter amino acid-binding protein glnQ-truncation 534610 - 534266 - | ABC transporter ATP-binding protein - glutamine, truncation glnQ-truncation 535024 - 534635 - | ABC transporter ATP-binding protein - glutamine, truncation TERM 652 534925 - 534940 + g 81 -7.6 -4.56597 | opp_overlap 534916 534925 CAGAAGGTCCAAGCA GGACAA CAAC TTGTCC TTTTTCAAAACGGAG TERM 653 535116 - 535105 - H 82 -4.4 -5.45726 | CATATCTGAAAAAAA TCAC TATA GTGA AATAAGAACAGGACA recJ 535289 - 537523 + | single-stranded-DNA-specific exonuclease RecJ TERM 654 537535 - 537552 + F 83 -6.3 -5.00616 | opp_overlap 537535 537550 537551 GTAGAAGTTAGGAAA GAGTTGG GAAA TCAACTC TTTTTTGAAAACAGA TERM 655 537769 - 537779 + G 89 -5.4 -5.48213 | opp_overlap 537769 GTACATTGCTGAAAT TGGA GAG TCCA TTTTTGTTTTGAATG spr0538 537698 - 539359 + | metallo-beta-lactamase superfamily protein TERM 656 539377 - 539401 + F 79 -10.1 -3.29511 | opp_overlap 539377 539383, overlap 539383 GTTGAAATAAACAGA GAGAAAGTCGA GTT TCGGCTTTTTC TTATAGAAAAATAGA TERM 657 539383 - 539395 + F 79 -5.5 -5.18726 | opp_overlap 539377 539383, overlap 539377 ATAAACAGAGAGAAA GTCGA GTT TCGGC TTTTTCTTATAGAAA TERM 658 540017 - 540003 - g 71 -4.2 -4.90296 | overlap 540005 AAAATCGGATAAAAA GACCAA ACT TTGGGC GTGGTGTGGCGAACA estA 539428 - 540207 + | tributyrin esterase TERM 659 540470 - 540487 + G 74 -6.3 -4.41494 | opp_overlap 540470 ACAGGGAAGAAAAAT TACTGGC GACA GCTAGTA TTTTGATTAGAACTC murM 540319 - 541539 + | Serine/alanine adding enzyme TERM 660 542358 - 542344 - g 74 -5 -4.7373 | overlap 542346 TGATTTGAGTAAAAA TCCTCA TTC TGAGAA AAAACAAAATCAACT murN 541544 - 542776 + | beta-lactam resistance factor TERM 661 543041 - 543019 - g 93 -10 -4.73388 | AACGGTCAGTAAAAA TTGGTCAACA AAG TATTGACCAA TGGGAGAAAACAGGG spr0542 542892 - 543551 + | hypothetical protein TERM 662 543548 - 543569 + F 85 -4.4 -5.59357 | ATATGAGACTAGTGA GTAGGGTA CTATCT TTCCCTAC TTTTTTTGCTATAAT uvrC 543591 - 545435 + | excinuclease ABC subunit C spr0544 545425 - 546258 + | hypothetical protein TERM 663 546293 - 546313 + T 100 -11.2 -4.4296 | opp_overlap 546293 ATGCAAACTAAAAAA GCGATTGG CTGGT CCAATCGC TTTTAGTATATCTTA TERM 664 546313 - 546293 - T 100 -11.2 -5.38497 | opp_overlap 546293 ATGCAAACTAAAAAA GCGATTGG CTGGT CCAATCGC TTTTAGTATATCTTA ABC-SBP 547255 - 546440 - | glutamine ABC transporter substrate-binding protein TERM 665 547082 - 547069 - G 71 -6.7 -4.08216 | CTACTGCCTTTAAAA CTTCG ATAT CGAAG CCTGTCAGATTGCCC nrd 547411 - 548016 + | nitroreductase family protein pepV 548029 - 549429 + | dipeptidase PepV spr0548 549483 - 550061 + | hypothetical protein spr0549 550225 - 550377 + | hypothetical protein spr0550 550378 - 550512 + | hypothetical protein TERM 666 550523 - 550554 + F 95 -8.8 -5.2853 | overlap 550524 TTTAAAATTTTGCAT TTCTCCTACTTGGT GTGG ACTGGGTAGGAGAG TTTTATTTTTAGATA TERM 667 550524 - 550553 + F 83 -10.1 -3.75491 | overlap 550523 TTAAAATTTTGCATT TCTCCTACTTGGT GTGG ACTGGGTAGGAGA GTTTTATTTTTAGAT TERM 668 550608 - 550619 + F 76 -4.4 -5.03715 | AAACATTTAATATTT GCAT CGTG ATGC TTTTTTCAGACTCCT TERM 669 550794 - 550807 + G 86 -8.1 -4.89567 | GGAGAACATTTTCTT CCTGC CATC GCAGG TTTTGTCTTTTCAGG brnQ 550668 - 552008 + | branched chain amino acid ABC transporter carrier protein TERM 670 552119 - 552158 + F 93 -8.1 -5.626 | opp_overlap 552124 GATTTTCATTGAGTA TAAAATCACTTTTGTAG TCAAGT CTACAGGAGTGATTTTC TTTTTTTATCCGATG TERM 671 553065 - 553078 + GF 71 -5.3 -4.5442 | ATATTCCATTTAAGC TGGAT ATCT ATCCA TTTTATGGTTCGGAC spr0552 552212 - 553249 + | hypothetical protein spr0553 553218 - 553721 + | HIT family protein TERM 672 553948 - 553931 - g 73 -8.5 -3.77219 | AGCATTCAAGGGAAA TACGATG AAAT CATCGTA GCCAACAAACACTAT spr0554 553724 - 554440 + | hypothetical protein TERM 673 554531 - 554513 - f 78 -10.4 -2.61264 | opp_overlap 554512, overlap 554512 GGTTCTATTCACAAC CTCAAAAC AGT GTTTTGAG CTGACTTCGTCAGTT TERM 674 554532 - 554544 + F 82 -7.7 -4.52857 | AAACAGTGTTTTGAG CTGAC TTC GTCAG TTTTATCTGCAACCT TERM 675 555004 - 554963 - g 71 -6.5 -4.25104 | overlap 554966 CTTTCGTTACGAAAA CACCACCAGCTGCTGTTCT TTTG AAAAAAGCTGCAGGTGTTG AAAAAGGATCAGGTA rplK 554749 - 555174 + | 50S ribosomal protein L11 TERM 676 555963 - 555934 - g 83 -7.3 -4.66833 | TTTGAAGCTGAAAAA TTGGTTGAAAACT TTAA AGCTTTCAACGAA ACAATCCAAAAAGCA rplA 555382 - 556071 + | 50S ribosomal protein L1 TERM 677 556097 - 556118 + F 89 -6.7 -5.58454 | gap 1, opp_overlap 556097 AACTAATGTAAAAAA GTTGAAGACA CTA TGTCT-CAAC TTTTTTTGATGTACG TERM 678 556118 - 556097 - f 84 -6.7 -5.1848 | gap 1, opp_overlap 556097 AACTAATGTAAAAAA GTTGAAGACA CTA TGTCT-CAAC TTTTTTTGATGTACG TERM 679 556474 - 556508 + F 79 -9.3 -3.50953 | opp_overlap 556479, overlap 556479 TTAAACGTGCTATAT CAAAACCAGTCCTTG AAAAA CGTGGACTGGTTTCG TGTTTGGATTATTAC TERM 680 556479 - 556503 + F 76 -7.8 -4.02206 | opp_overlap 556479, overlap 556474 CGTGCTATATCAAAA CCAGTCCTTG AAAAA CGTGGACTGG TTTCGTGTTTGGATT TERM 681 556768 - 556750 - f 78 -10.4 -2.61383 | opp_overlap 556749, overlap 556749 556759 AGTTCTATCCACAAC CTCAAAAC AGT GTTTTGAG CTGACTTCGTCAGTT TERM 682 556813 - 556795 - f 78 -10.4 -2.61383 | opp_overlap 556794, overlap 556794 556804 AGTTCTATCCACAAC CTCAAAAC AGT GTTTTGAG CTGACTTCGTCAGTT TERM 683 556858 - 556840 - f 78 -10.4 -2.61383 | overlap 556839 556849 AGTTCTATCCACAAC CTCAAAAC AGT GTTTTGAG CTGACTACGTCAGTT TERM 684 556903 - 556885 - f 78 -10.4 -2.61383 | opp_overlap 556884, overlap 556884 556894 AGTTCTATCCACAAC CTCAAAAC AGT GTTTTGAG CTGACTTCGTCAGTT TERM 685 556948 - 556930 - f 78 -10.4 -2.61383 | opp_overlap 556929, overlap 556929 556939 AGTTCTATCCACAAC CTCAAAAC AGT GTTTTGAG CTGACTTCGTCAGTT TERM 686 556993 - 556975 - f 78 -10.4 -2.61383 | overlap 556974 556984 AGTTCTATCCACAAC CTCAAAAC AGT GTTTTGAG CTGACTACGTCAGTT TERM 687 557038 - 557020 - f 78 -10.4 -2.61383 | opp_overlap 557019, overlap 557019 557029 AGTTCTATCCACAAC CTCAAAAC AGT GTTTTGAG CTGACTTCGTCAGTT TERM 688 557083 - 557065 - f 78 -10.4 -2.61383 | overlap 557064 AGTTCTATCCACAAC CTCAAAAC AGT GTTTTGAG CTGACTACGTCAGTT TERM 689 557128 - 557110 - f 78 -10.4 -2.61383 | opp_overlap 557126, overlap 557109 AGTTCCATCTACAAC CTCAAAAC AGT GTTTTGAG CAACCTGAGGCTAGT TERM 690 558705 - 558720 + GF 71 -7.6 -3.66178 | overlap 558696 GCAGACCTTTGAAGC GGTCAA GGAT TTGACC TTTGAGGTTCCAAAA ABC-NBD 558589 - 559581 + | ABC transporter ATP-binding protein spr0558 559541 - 560401 + | hypothetical protein spr0559 560403 - 561188 + | hypothetical protein TERM 691 561488 - 561478 - g 79 -5.4 -4.92314 | opp_overlap 561478 ATCAAGGTAGAAAAA TTGG GAG CCAA TTGCTTGCTACTTTA spr0560 561441 - 561686 + | hypothetical protein TERM 692 561829 - 561857 + F 83 -8.3 -4.41237 | opp_overlap 561827 561829 561832 TAGATAGGTAGAAGA TAACCGTTAAG CCTTATT CTTAGCGGTTA TTTATATTGTTTAAT TERM 693 562100 - 562082 - f 78 -10.4 -2.61383 | opp_overlap 562081, overlap 562081 AGTTCTATCCACAAC CTCAAAAC AGT GTTTTGAG CTGACTTCGTCAGTT TERM 694 562145 - 562127 - f 78 -10.4 -2.61383 | overlap 562126 AGTTCCATCTACAAC CTCAAAAC AGT GTTTTGAG CAACCTGCGGCTAGT prtA 562418 - 568852 + | cell wall-associated serine proteinase precursor PrtA TERM 695 569112 - 569142 + F 100 -9.9 -5.27335 | overlap 569139 ATGAGACAATTTCAA GGAATTAAGTAGC GTTTG GTTGCTTAATTCC TTTTTATTTGGAAGG TERM 696 569165 - 569204 + F 100 -16 -2.81312 | gap 1, opp_overlap 569161 569160 TTGGAAGGAAGTTTT TCGTAACCGCCCAATA-AC GAA GTCTATTGGACGGTTACGA TATGATCACTGACTT TERM 697 569257 - 569239 - f 78 -10.4 -2.61383 | overlap 569238 AGTCTTATCTACAAC CTCAAAAC TGT GTTTTGAG CAACCTGCGGCTAGC TERM 698 569917 - 569903 - g 74 -5 -4.76644 | AAGACCTATCAAAAA TTTCCG AAC CAGAAA AACTTTATGCTTACA PTS-EII 569431 - 569952 + | PTS system IIA component, putative spr0563 569990 - 570295 + | hypothetical protein PTS-EII 570343 - 571818 + | PTS system, IIC component, putative TERM 699 571930 - 571948 + F 78 -10.4 -2.61383 | opp_overlap 571915 571929, overlap 571929 GACTGACGAAGTCAG CTCAAAAC ATG GTTTTGAG GTTGTAGATGAAACT TERM 700 571974 - 571962 - f 73 -7.7 -3.83205 | AGGTTGTAGATGAAA CTGAC GAA GTCAG TAATCATACATACGG TERM 701 575451 - 575441 - g 70 -5.4 -4.34263 | GCCGAAGAAGATAAA GCTA AGT TAGC AATTCCAGGTTCTCG bgaA 572123 - 578809 + | beta-galactosidase precursor spr0566 579598 - 579191 - | hypothetical protein TERM 702 579309 - 579290 - G 81 -12.2 -2.87132 | opp_overlap 579292, overlap 579292 GCGTTCGTTCATATA CAGTCCCT TTTG AGGGACTG ATTCAGGTTCATCAG TERM 703 579567 - 579587 + g 77 -6.1 -4.63218 | overlap 579568 TCTGTTCTTGAAGTT TGGCGGAGA ATT TCTCTGTCG TTTTCTTCCACACAA spr0567 579911 - 579666 - | hypothetical protein TERM 704 579982 - 580000 + rH 100 -10.3 -5.42259 | opp_overlap 579982 AACCATGCAAAAAAA GCAACGG CAAAT CCGTTGC TTTTTTTGGAGATAA TERM 705 580000 - 579982 - RH 100 -10.3 -5.49729 | opp_overlap 579982 AACCATGCAAAAAAA GCAACGG CAAAT CCGTTGC TTTTTTTGGAGATAA spr0568 580482 - 580123 - | hypothetical protein TERM 706 580648 - 580636 - gH 74 -6.3 -4.37092 | opp_overlap 580623, overlap 580623 ACTCTTTGGAGAAAA GACTT TTA AAGTC CCTATTGATGCGGAA spr0569 580406 - 581026 + | hypothetical protein spr0570 581084 - 581530 + | hypothetical protein spr0571 581508 - 582071 + | hypothetical protein spr0572 582064 - 582318 + | hypothetical protein nha2 582330 - 584384 + | sodium/hydrogen exchanger family protein TERM 707 584443 - 584459 + F 87 -10.9 -3.48924 | TTACCGTATGTATGT GACTGAC TTC GTCAGTC TTATCTACAACCTCA TERM 708 584489 - 584471 - f 78 -10.4 -2.61383 | overlap 584470 AGTCTTATCTACAAC CTCAAAAC AGT GTTTTGAG CAGCTTGCGGCTAGC TERM 709 584595 - 584609 + G 75 -2.8 -5.2166 | opp_overlap 584595, overlap 584597 AGAGCTGATAGACAA GCCTTT ATT AAAAGC TTTTTTGCATTATTA spr0574 584548 - 585423 + | ribonuclease BN, putative TERM 710 585435 - 585492 + F 100 -18.1 -3.7046 | opp_overlap 585443, overlap 585438 585443 CTAACTATTTATCCA TTACAAAAGCGCATAGTATCAAGGCTT TATA GAATCTTGATACTATGCGCTTTTGTGC TTTGACAGTTTTTTG TERM 711 585438 - 585489 + F 100 -22 -2.93783 | opp_overlap 585443, overlap 585435 585443 ACTATTTATCCATTA CAAAAGCGCATAGTATCAAGGCTT TATA GAATCTTGATACTATGCGCTTTTG TGCTTTGACAGTTTT TERM 712 585484 - 585443 - f 100 -15.4 -4.4767 | opp_overlap 585438 585435 585443 TTATCCATTACAAAA GCGCATAGTATCAAGGCT TTATAG AATCTTGATACTATGCGC TTTTGTGCTTTGACA TERM 713 585443 - 585484 + F 100 -16.1 -4.61566 | opp_overlap 585443, overlap 585438 585435 TTATCCATTACAAAA GCGCATAGTATCAAGGCTT TATA GAATCTTGATACTATGCGC TTTTGTGCTTTGACA TERM 714 585633 - 585643 + F 79 -4 -5.49579 | TGATAGGAGGAACTT TATG GGT CATA TTTTCTTTTTTCTAA TERM 715 585674 - 585684 + G 70 -5.4 -4.39226 | GTGTCTTTTTGGCAG GGAT TCT ATCC TTCTTTTCTCCTTGT ccdA 585634 - 586344 + | cytochrome c-type biogenesis protein TERM 716 586391 - 586406 + G 74 -6.1 -4.42464 | overlap 586388 CAAACATGTGTTCTT GGAGC AGGTTC GCTCC TTTGTTTGACGGCTT spr0576 586337 - 586930 + | hypothetical protein TERM 717 587384 - 587398 + G 73 -8.6 -3.6761 | overlap 587383 AAATGATGTGGGGAC CCAGTA CCG TACTGG TGTTTATTACACAGA msrA 586941 - 588053 + | bifunctional methionine sulfoxide reductase A/B protein TERM 718 588111 - 588123 + F 82 -7.7 -4.52857 | CCGTATGTAGGGTTA CTGAC TTC GTCAG TTTTATCTACAACCT TERM 719 588156 - 588168 + F 88 -7.7 -4.87133 | AAGCTATACTTTGAG CTGAC TTC GTCAG TTTTATTTACAACCT rr09 588303 - 589058 + | DNA-binding response regulator TERM 720 589045 - 589070 + F 81 -7.6 -4.42238 | opp_overlap 589044 589047 GTCAGTTTAAGAAGG GAGAAGACCG ATGAAG CGTTCTTCTC TTTTAGTTAGAATGG hk09 589055 - 590746 + | sensor histidine kinase, putative TERM 721 590747 - 590766 + F 93 -9.3 -4.44915 | opp_overlap 590747 ATAGAAACTAGCTAA CTCCCAG TCAATT CTGGGAG TTTTATGCGTAATTG TERM 722 590766 - 590747 - f 77 -9.3 -3.182 | opp_overlap 590747 ATAGAAACTAGCTAA CTCCCAG TCAATT CTGGGAG TTTTATGCGTAATTG spr0580 590841 - 591425 + | hypothetical protein zmpB 591447 - 597077 + | Zinc metalloprotease TERM 723 597099 - 597125 + F 70 -3.8 -4.95758 | gap 1, opp_overlap 597092, overlap 597088 597121 ATAAAATCGTAAAAA GGTAGAT-CAG CTTTGT CTGTATCTGCC TTTTTATGCTATACT TERM 724 597674 - 597686 + G 79 -4.8 -5.00884 | GGCAGTAATTTCCAT GAGC CCAGA GCTC TTTTTTGAGCAAAAT pabB 597147 - 598868 + | Para-aminobenzoate synthetase spr0583 599026 - 600015 + | pneumococcal surface protein, putative TERM 725 600054 - 600089 + F 77 -9.2 -3.21778 | opp_overlap 600057, overlap 600053 600057 GAAAAAAATTCCTTA TAATTCACTTACGCAA ACCT TTGCATAAGTGAATGA ATTTTGATATACTAG TERM 726 600086 - 600057 - f 91 -13.1 -3.3341 | opp_overlap 600054 600053 600057 AAAAATTCCTTATAA TTCACTTACGCAA ACCT TTGCATAAGTGAA TGAATTTTGATATAC TERM 727 600057 - 600086 + F 81 -10.9 -2.79239 | opp_overlap 600057, overlap 600054 600053 AAAAATTCCTTATAA TTCACTTACGCAA ACCT TTGCATAAGTGAA TGAATTTTGATATAC glcK 600133 - 601110 + | glucokinase TERM 728 601116 - 601161 + F 80 -5 -5.34555 | gap 1, opp_overlap 601121 601129 601131, overlap 601121 ATTGCAATAAGATAA TGAGAGAGGAA-AATGCTAAC CTAGA GTTAGTAATGTTCCTCTTTTA TTTTTTATGCTATAC TERM 729 601121 - 601156 + F 83 -4.9 -5.49579 | gap 1, opp_overlap 601121 601129 601131, overlap 601116 AATAAGATAATGAGA GAGGAA-AATGCTAAC CTAGA GTTAGTAATGTTCCTC TTTTATTTTTTATGC thyA 601207 - 602046 + | thymidylate synthase TERM 730 602056 - 602089 + TF 81 -8.3 -4.18934 | opp_overlap 602061, overlap 602061 ATTTAAAAGAATAGA AAAAAGAAGTTGAGA ATAA TCCCAACTTCTTTTG TTTCTTAACGTGATA TERM 731 602061 - 602084 + TF 90 -8.2 -5.09762 | opp_overlap 602061, overlap 602056 AAAGAATAGAAAAAA GAAGTTGAGA ATAA TCCCAACTTC TTTTGTTTCTTAACG TERM 732 602084 - 602061 - Tf 100 -10.4 -5.57729 | opp_overlap 602061 602056 AAAGAATAGAAAAAA GAAGTTGAGA ATAA TCCCAACTTC TTTTGTTTCTTAACG TERM 733 602106 - 602120 + TF 77 -4.9 -5.15117 | TTCTTAACGTGATAC GCGGC GACGA GCTGC TTTTTTACGGTTTTC spr0586 602264 - 602094 - | hypothetical protein spr0587 602140 - 602328 + | hypothetical protein TERM 734 602589 - 602605 + G 80 -6.5 -4.81644 | opp_overlap 602590, overlap 602590 GATGTTAGAGAGATA ACCGAGT CTT ACTCGGC TTTTGATTTTGTTTC TERM 735 602590 - 602604 + G 79 -10 -3.46546 | opp_overlap 602590, overlap 602589 ATGTTAGAGAGATAA CCGAGT CTT ACTCGG CTTTTGATTTTGTTT TERM 736 602604 - 602590 - g 80 -10 -3.64466 | opp_overlap 602590 602589 ATGTTAGAGAGATAA CCGAGT CTT ACTCGG CTTTTGATTTTGTTT miaA 602334 - 603269 + | tRNA delta(2)-isopentenylpyrophosphate transferase spr0589 603262 - 604500 + | GTP-binding protein HflX spr0590 604493 - 605116 + | hypothetical protein spr0591 605131 - 606060 + | ribonuclease Z spr0592 606081 - 606836 + | hypothetical protein TERM 737 606834 - 606885 + TF 79 -8.2 -3.91144 | opp_overlap 606840, overlap 606840 606843 ACTTTTAATTATAAG TAAAAAGAACCAATGTGCAGGTTG TTGC TAGCCTACATATTGGTTCTTATCA TTTCTCAACTATCAA TERM 738 606879 - 606840 - Tf 95 -8.7 -4.95876 | opp_overlap 606834 606840 606843 AATTATAAGTAAAAA GAACCAATGTGCAGGTT GTTGCT AGCCTACATATTGGTTC TTATCATTTCTCAAC TERM 739 606840 - 606879 + TF 90 -11.6 -3.64915 | opp_overlap 606840, overlap 606834 606843 AATTATAAGTAAAAA GAACCAATGTGCAGGTTG TTGC TAGCCTACATATTGGTTC TTATCATTTCTCAAC TERM 740 606843 - 606876 + TF 76 -7.5 -3.94823 | opp_overlap 606840, overlap 606840 606834 TATAAGTAAAAAGAA CCAATGTGCAGGTTG TTGC TAGCCTACATATTGG TTCTTATCATTTCTC cpsY 607936 - 606890 - | transcriptional regulator spr0594 607862 - 608131 + | hypothetical protein spr0595 608131 - 608511 + | hypothetical protein spr0596 608630 - 608827 + | hypothetical protein TERM 741 608833 - 608864 + T 74 -6.8 -4.40804 | opp_overlap 608834 608841, overlap 608841 TTTTCGGTAAATAAA AGAAAAAAGCTTTA GTTT TAAAGCTTTTTTTG TTTTATCGACTCATC TERM 742 608863 - 608834 - T 90 -8.1 -4.86731 | opp_overlap 608833 608841, overlap 608841 TTTCGGTAAATAAAA GAAAAAAGCTTTA GTTT TAAAGCTTTTTTT GTTTTATCGACTCAT TERM 743 608856 - 608841 - T 93 -6.2 -5.95449 | opp_overlap 608833 608841, overlap 608834 AAATAAAAGAAAAAA GCTTTA GTTT TAAAGC TTTTTTTGTTTTATC TERM 744 608841 - 608856 + T 95 -6.2 -6.14618 | opp_overlap 608841 608834, overlap 608833 AAATAAAAGAAAAAA GCTTTA GTTT TAAAGC TTTTTTTGTTTTATC rsuA 609592 - 608867 - | ribosomal small subunit pseudouridine synthase A TERM 745 610122 - 610108 - g 83 -6.4 -5.08824 | opp_overlap 610108 TTCGTATTGAAAAAA GCCTTG GAA CAAGAC CTTGTCCCAATCGTG typA 609733 - 611595 + | elongation factor Tu family protein spr0599 611615 - 611869 + | hypothetical protein TERM 746 611874 - 611889 + F 79 -5.4 -5.14965 | opp_overlap 611867 611874 AAAGAAGATAAAAAA GAGAGT TTTG GCTCTC TTTTTTGCTAGGAAT TERM 747 611889 - 611874 - f 83 -4.7 -5.57729 | opp_overlap 611874, overlap 611867 AAAGAAGATAAAAAA GAGAG TTTTGG CTCTC TTTTTTGCTAGGAAT TERM 748 612198 - 612210 + G 79 -3.3 -5.40072 | TTTTGTTGCATTGTT GCTCA AGG TGTGC TTTTTTTGAAAGAAA spr0600 612185 - 612532 + | hypothetical protein TERM 749 612580 - 612553 - f 89 -11.4 -3.48395 | opp_overlap 612553 AGTTTTCTTAGATAA TTCCCCTTGTAA GAAA TTACAGGGGGAA TTTTGTTTACAAGGA TERM 750 612553 - 612580 + F 100 -13.6 -4.86731 | opp_overlap 612553 AGTTTTCTTAGATAA TTCCCCTTGTAA GAAA TTACAGGGGGAA TTTTGTTTACAAGGA spr0601 612603 - 614624 + | hypothetical protein TERM 751 614963 - 614953 - g 79 -5.4 -4.87893 | opp_overlap 614953 AAGTTGAAGGAAAAA GAGA AAA TCTC TTTGATGAAACAAGC TERM 752 615184 - 615174 - g 85 -6.8 -5.06103 | AGAATCTTTAAAAAA TCCG AAT CGGA CCATTATTATTGCGA ABC-NBD 614626 - 615267 + | ABC transporter ATP-binding protein - sodium transport TERM 753 615295 - 615315 + F 88 -6.2 -5.65927 | opp_overlap 615303 CAGTTAGAAGAAAGA GTCACAAA CACAC TTTGTGGC TTTTTTATTTCCATA murD 615371 - 616723 + | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase murG 616727 - 617785 + | N-acetylglucosaminyl transferase divIB 617795 - 618985 + | cell division protein DivIB spr0606 619395 - 619165 - | hypothetical protein TERM 754 619508 - 619539 + H 84 -6.7 -5.09762 | gap 1 TATTGATTGCGGACT GAGGGACTAGAGTA TGTTT TACT-TAGCCCCTC TTTTATTTATTAAAG spr0607 619725 - 620573 + | hypothetical protein TERM 755 621355 - 621332 - g 70 -9 -3.09925 | overlap 621329 AGATATAAATAAGTA CACTTTATCT GATA AGACAAAGTG GCCGACTACACCAGA TERM 756 621892 - 621904 + G 71 -4.9 -4.56978 | GTATAGTGTGTCTTA GTTAT TAT ATAAC TTTATTATTTGGCAA spr0608 620916 - 621929 + | HesA/MoeB/ThiF family protein ABC-NBD-truncation 622097 - 622222 + | ABC transporter ATP-binding protein - unknown substrate, truncation ABC-NBD-truncation 622319 - 622972 + | ABC transporter ATP-binding protein - unknown substrate, truncation spr0611 622965 - 623678 + | hypothetical protein IS1239-truncation 624095 - 623952 - | degenerate transposase TERM 757 624305 - 624321 + H 70 -4.3 -4.7254 | opp_overlap 624306, overlap 624306 AGGTTAGACGGTGAA AGGGTGG AGA CTACCCA TTTTTCGTGGAACCT TERM 758 624330 - 624353 + H 90 -8.2 -5.18357 | gap 1 CTACCCATTTTTCGT GGAACCTTGCT GTT GGCA-GGTTCC TTTTTTCGTGGCTTC pyrF 624413 - 625114 + | orotidine 5'-phosphate decarboxylase pyrE 625148 - 625780 + | orotate phosphoribosyltransferase TERM 759 625802 - 625817 + F 89 -9 -4.30559 | opp_overlap 625797 625801 625799 625802 625804 AAGATAAAGAGAGAC GAGGCT ACCG AGCCTC TTTTACCATTTTGTT TERM 760 625826 - 625859 + F 87 -12.9 -2.71263 | opp_overlap 625846 GAGCCTCTTTTACCA TTTTGTTTAAAATAT GACA ATATTTTAAACAAAA TAATTGACAACGCTT spr0615 625960 - 626364 + | hypothetical protein TERM 761 626402 - 626435 + F 83 -6.2 -5.18726 | gap 1, overlap 626403 AAAGATGGTTGATTG T-GGGTGTAGCAT GAAAAAAGA ATGCTACACCCTA TTTTTATTATAAGGA TERM 762 626403 - 626433 + F 100 -11.3 -4.22377 | overlap 626402 AAGATGGTTGATTGT GGGTGTAGCAT GAAAAAAGA ATGCTACACCC TATTTTTATTATAAG spr0616 626460 - 627224 + | hypothetical protein spr0617 627173 - 627976 + | hypothetical protein TERM 763 628147 - 628158 + G 80 -4.4 -5.30189 | AAAAGGGCCTAATCT GAGT CAAA ACTC TTTTTTAGTCTTATC spr0618 627980 - 628684 + | hypothetical protein ABC-NBD 628681 - 629328 + | ABC transporter ATP-binding protein TERM 764 629406 - 629364 - T 75 -7.3 -4.23758 | gap 1, opp_overlap 629373, overlap 629373 ATGTTATAGGTAAAA TCTTAAAAAGGGATTGGA GCTTAAAA TCCAGTCCCTTT-TAAGA GTTAATGGCCACCTT TERM 765 629373 - 629398 + T 75 -6.9 -4.15106 | opp_overlap 629373 629364 GTAAAATCTTAAAAA GGGATTGGA GCTTAAAA TCCAGTCCC TTTTAAGAGTTAATG TERM 766 629398 - 629373 - T 72 -4.7 -4.7416 | opp_overlap 629373, overlap 629364 GTAAAATCTTAAAAA GGGATTGGA GCTTAAAA TCCAGTCCC TTTTAAGAGTTAATG ABC-SBP-truncation 629956 - 629408 - | ABC transporter substrate-binding protein - unknown substrate, truncation ABC-SBP-truncation 630273 - 630031 - | ABC transporter substrate-binding protein - unknown substrate, truncation glnQ 631043 - 630285 - | amino acid ABC transporter ATP-binding protein glnP 631721 - 631044 - | amino acid ABC transporter permease glnP 632361 - 631681 - | amino acid ABC transporter permease TERM 767 632418 - 632430 + H 76 -2.7 -5.4756 | ACTTAAAATCTTCTT TGGAT AAT ATCTA TTTTTTATTGCCGTT lctO-truncation 632576 - 632722 + | lactate oxidase, truncation lysS 632850 - 634340 + | lysyl-tRNA synthetase TERM 768 634348 - 634369 + F 79 -4.4 -5.26875 | TGAAATAAATTCTTA TCCTCTGG CTCTTA TCAGGGGA TTTTTTGATTCAAAA lctO 634965 - 636101 + | lactate oxidase TERM 769 636114 - 636132 + F 100 -10.3 -5.17744 | opp_overlap 636112 TGATAAAACAGATTG CCTCCAC TGAAT GTGGAGG TTTTTCTTCGTGTAT spr0628 636656 - 637324 + | hypothetical protein TERM 770 637424 - 637406 - f 78 -10.4 -2.61383 | opp_overlap 637405 637422, overlap 637405 AGTTCTATCCACAAC CTCAAAAC AGT GTTTTGAG CTGACTTCGTCAGTC TERM 771 637674 - 637643 - g 93 -7.4 -5.50723 | opp_overlap 637649 637653, overlap 637644 TTATTAAAAGAAAAA GCACCATTGGTCAT TTGT ATAACCAATGATGT AGTAAAAAATTTCAC TERM 772 637673 - 637644 - g 86 -10.9 -3.88807 | opp_overlap 637649 637653, overlap 637643 TATTAAAAGAAAAAG CACCATTGGTCAT TTGT ATAACCAATGATG TAGTAAAAAATTTCA TERM 773 638307 - 638294 - g 74 -4.5 -4.89393 | opp_overlap 638294, overlap 638295 GAAATGGCAGAAAAA CGTCC AAAT GGACA TCTTCCTGGGACATT thiM 637592 - 638395 + | hydroxyethylthiazole kinase thiE 638397 - 639026 + | thiamine-phosphate pyrophosphorylase TERM 774 639363 - 639387 + F 89 -3 -5.79595 | gap 1 ATCTTGTAAGCTGAA CTCTAATT-CG TATC TGTAATTAGAG TTTTTTCTTTTACGA TERM 775 639561 - 639577 + G 76 -2.3 -5.47159 | overlap 639562 639567 CTTGAGTGTCCCACT TTTCTTT AAA AAAGGAG TTTTTTATGTTGAAA spr0631 639551 - 640144 + | hypothetical protein ABC-NBD 640145 - 641530 + | ABC transporter ATP-binding protein spr0633 641532 - 642182 + | hypothetical protein tenA 642193 - 642885 + | extracellular enzyme gene transcriptional regulator spr0635 642890 - 643414 + | hypothetical protein thiM 643414 - 644217 + | hydroxyethylthiazole kinase, putative thiE 644210 - 644842 + | thiamine-phosphate pyrophosphorylase TERM 776 645042 - 645010 - T 100 -12.9 -4.98436 | opp_overlap 644999 645010 CGAAGAGTATAAAAA CTCTCTAATTCCC TTAAAGT GGGAACTAGAGAG TTTTTTTCTTAATCT TERM 777 645010 - 645042 + T 100 -10.7 -5.85737 | opp_overlap 645010, overlap 644999 CGAAGAGTATAAAAA CTCTCTAATTCCC TTAAAGT GGGAACTAGAGAG TTTTTTTCTTAATCT thiD 645842 - 645051 - | phosphomethylpyrimidine kinase copY 646178 - 646603 + | COPAB ATPase metal-fist type repressor spr0640 646614 - 646985 + | hypothetical protein TERM 778 648552 - 648540 - g 74 -6.3 -4.32201 | CGAATCAATGGAAAA CAAGT TTT ACTTG GAAATGCTAAAATGC ctpA 646986 - 649238 + | P-type ATPase - copper transporter TERM 779 649478 - 649461 - g 71 -6.3 -4.28774 | opp_overlap 649461 TGACTCAAGGGAAAA TTACTGC ATCT GCAGCAA TGCTTAACGTATTGA spxB 649445 - 651220 + | pyruvate oxidase TERM 780 651294 - 651311 + F 83 -7.7 -4.82901 | opp_overlap 651283 651294 651297 AGCAGAACTTTAAAA GATCGGA GCAA TCCGGTC TTTTTATGGAGGAGA spr0643 651331 - 651678 + | hypothetical protein TERM 781 651748 - 651765 + T 88 -7.7 -4.96848 | opp_overlap 651748 651751 TATGAACTATTGAAA GATCGGA GCAA TCCGGTC TTTTTATATAAAGAA transposase_C 652448 - 651795 - | degenerate transposase spr0645 652683 - 652336 - | hypothetical protein bgl-truncation 653116 - 653412 + | phospho-beta-gluco or galactosidase, truncation TERM 782 653471 - 653487 + F 89 -6.6 -5.59357 | opp_overlap 653471, overlap 653463 ATAAGATGTAAAAAA GAGTTC AAATG GAACTC TTTTTTTGCTATAAT TERM 783 653487 - 653471 - f 84 -6.6 -5.17054 | opp_overlap 653471 653463 ATAAGATGTAAAAAA GAGTTC AAATG GAACTC TTTTTTTGCTATAAT pmi 653533 - 654477 + | mannose-6-phosphate isomerase TERM 784 654514 - 654482 - T 100 -10 -5.28176 | opp_overlap 654486, overlap 654486 GTCATCCATAAAAAA GAAAGGACCTGAGT TCATT ACTCAAGTCCTTTT GATTACATAAATTGG TERM 785 654510 - 654486 - T 100 -10.8 -5.13354 | opp_overlap 654486, overlap 654482 TCCATAAAAAAGAAA GGACCTGAGT TCATT ACTCAAGTCC TTTTGATTACATAAA TERM 786 654486 - 654510 + T 89 -8.6 -4.43477 | opp_overlap 654486 654482 TCCATAAAAAAGAAA GGACCTGAGT TCATT ACTCAAGTCC TTTTGATTACATAAA NS_transporter 655971 - 654580 - | sodium-dependent transporter TERM 787 655038 - 654985 - G 100 -21.2 -4.06786 | overlap 654987 AGGCAAGACGATAAA GACCAAGCTCGGTCCCCCTTCA GACTGGATAT TGAAGGGGGACCGAGCTTGGAA AATGGCTAGACCTGC TERM 788 655036 - 654987 - G 100 -28.2 -3.62291 | overlap 654985 GCAAGACGATAAAGA CCAAGCTCGGTCCCCCTTCA GACTGGATAT TGAAGGGGGACCGAGCTTGG AAAATGGCTAGACCT TERM 789 655901 - 655880 - G 93 -8.1 -5.4593 | opp_overlap 655879 655880 655893 TCAAAATAAGAAAAA GCTACTTGA GTTG TCAAATAGC CTTCTGTTTGATTGA TERM 790 656454 - 656437 - g 71 -4.1 -4.99056 | CAAGACAATCAAAAA TACCACC AAGA AGCGGTA GAGAAATATGGTCAA mta 656131 - 656793 + | regulator of the multidrug efflux pump pmrA TERM 791 656817 - 656795 - T 100 -15 -4.37211 | opp_overlap 656795 CAAATGCAGAATAAA TAGGCTAGGA ATT TCCTAGCCTA TTTTTTATTTCAAAT TERM 792 656795 - 656817 + T 100 -15 -5.64421 | opp_overlap 656795 CAAATGCAGAATAAA TAGGCTAGGA ATT TCCTAGCCTA TTTTTTATTTCAAAT spr0650 657277 - 656822 - | hypothetical protein spr0651 658490 - 657297 - | hypothetical protein TERM 793 658518 - 658496 - R 100 -11.4 -5.67063 | opp_overlap 658499 TGTACCACAAAAAAA CAAGAGATGA TGG TCACCTCTTG TCAAGAATGCAATTA spr0652 659376 - 658531 - | hypothetical protein TERM 794 658652 - 658662 + g 71 -4 -4.99435 | ATTCGCTCTGAGAGC TGTT GAC AACA TTTTTCGTTATTGCG TERM 795 659408 - 659422 + H 76 -2.8 -5.48303 | overlap 659390 659389 TGTCAGTTATACATT GACAAA GGT TCTGTC TTTTTTTACAATTAT spr0653 659501 - 660058 + | hypothetical protein TERM 796 660491 - 660476 - g 76 -4.6 -5.1356 | opp_overlap 660476, overlap 660460 CTTTATCAAGAAAAA GGGACA GAAT TGACCC ATTTACCACTTGAGA comEB 660077 - 660544 + | cytidine and deoxycytidylate deaminase family protein TERM 797 660562 - 660585 + F 82 -5.4 -5.23316 | opp_overlap 660558 660563, overlap 660563 ATTATCAAAAATAAA TGGTTTAGAA AGAT TTTTAAACCG TTTTTTGGTATAATA upp 660612 - 661262 + | uracil phosphoribosyltransferase TERM 798 661302 - 661278 - f 71 -6.6 -4.22475 | gap 1 GATCGAAAAGAAGAA TGACTTGGAAA AGTA TTTCCA-GTCA CGAAAGGAGGTTGGG clpP 661436 - 662026 + | ATP-dependent Clp protease proteolytic subunit TERM 799 662039 - 662058 + TF 95 -8.6 -5.59357 | opp_overlap 662038 662039 TAATGATGATAGAAG GCAAACTC GACT GGGTTTGC TTTTTTTGGTATAAT spr0658 662449 - 662219 - | hypothetical protein spr0657 662105 - 662353 + | hypothetical protein livJ 662455 - 663615 + | branched chain amino acid ABC transporter amino acid-binding protein TERM 800 663624 - 663668 + F 95 -12.3 -3.84648 | opp_overlap 663624 663632 663634, overlap 663626 ACCATAATAGAAAAA TGTTGAAATAGGGAATGAGCC TTT GACTCACTCCCTGTTTCGATA TTTAATACTCTTCGA TERM 801 663668 - 663624 - f 100 -10.1 -5.16133 | opp_overlap 663624 663626, overlap 663632 663634 ACCATAATAGAAAAA TGTTGAAATAGGGAATGAGCC TTT GACTCACTCCCTGTTTCGATA TTTAATACTCTTCGA TERM 802 663626 - 663666 + F 93 -12.7 -3.50553 | opp_overlap 663624 663632 663634, overlap 663624 CATAATAGAAAAATG TTGAAATAGGGAATGAGCC TTT GACTCACTCCCTGTTTCGA TATTTAATACTCTTC TERM 803 663660 - 663632 - f 86 -10.3 -3.69455 | opp_overlap 663626 663624, overlap 663624 663634 AGAAAAATGTTGAAA TAGGGAATGAGCC TTT GACTCACTCCCTG TTTCGATATTTAATA TERM 804 663658 - 663634 - f 93 -12.9 -3.41445 | opp_overlap 663626 663624, overlap 663632 663624 AAAAATGTTGAAATA GGGAATGAGCC TTT GACTCACTCCC TGTTTCGATATTTAA TERM 805 663728 - 663744 + F 87 -10.9 -3.48924 | opp_overlap 663725 TTGGATTATATATGT GACTGAC TTC GTCAGTC TTATCTACAACCTCA TERM 806 663775 - 663755 - f 72 -8.3 -3.35996 | overlap 663756 CAGTCTTATCTACAA CCTCAAAGC AGT GCTTTGAGC AACCTGCGGCTAGTT TERM 807 663774 - 663756 - f 84 -11.8 -2.61383 | overlap 663755 AGTCTTATCTACAAC CTCAAAGC AGT GCTTTGAG CAACCTGCGGCTAGT livH 663874 - 664752 + | branched chain amino acid ABC transporter permease livM 664756 - 665712 + | branched chain amino acid ABC transporter permease livG 665712 - 666476 + | branched chain amino acid ABC transporter ATP-binding protein TERM 808 666824 - 666811 - g 74 -5.3 -4.6635 | AAATCGTGAAGAAAA TCAAG CTAA CTTGA AGAAGGTTTTCTCAC livF 666476 - 667186 + | branched chain amino acid ABC transporter ATP-binding protein TERM 809 667189 - 667203 + F 85 -8.6 -4.25283 | opp_overlap 667189 TCTAGGTGGCTAAAA CAATCC AGT GGATTG TTTTAGTCGGCAGAT TERM 810 667203 - 667189 - f 85 -8.6 -4.08767 | opp_overlap 667189 TCTAGGTGGCTAAAA CAATCC AGT GGATTG TTTTAGTCGGCAGAT TERM 811 667291 - 667277 - f 82 -8.6 -4.0371 | TAGGTTGCAGATAAA GATTGC GAA GCAATC ATCAAATCCAGAGGA TERM 812 667470 - 667488 + F 93 -8.9 -4.77759 | opp_overlap 667472 TTACCTTCATTCACA GAGCTCT ATTTC AGAGCTC TTTTTGCTAGCTTAT TERM 813 668207 - 668197 - g 78 -4 -5.27335 | opp_overlap 668197 GCCTTGAAAGAAAAA TTTG AAG CAAA TGGTATTCAAGTGGA spr0664 667600 - 668256 + | acetoin utilization protein AcuB, putative TERM 814 668262 - 668277 + F 95 -9 -5.14563 | opp_overlap 668261 AGTCTTGTAAGAAGG GAAGCC CAAA GGCTTC TTTTTTCATGAAAAG TERM 815 668584 - 668568 - g 70 -9.5 -2.56828 | overlap 668567 668565 AAACACTTACAATAC CTTCCAT AAG ATGGAAG AGTTGCAGGATGAAG prfB 668470 - 669459 + | peptide chain release factor 2 ftsE 669477 - 670169 + | ABC transporter ATP-binding protein & cell division protein ftsX 670099 - 671088 + | cell division ABC transporter, permease protein FtsX TERM 816 671110 - 671127 + F 95 -8.5 -5.14563 | TAGCTGCTTTTATGA GGAGATT GTAA AATCTCC TTTTTTGCTACAAGA TERM 817 671349 - 671322 - f 100 -10.8 -4.18119 | gap 1, opp_overlap 671329, overlap 671323 ATTAAATCATAGAAA GTGCAAACGTTTT CGT AAAACGTTTGC-C TAAATAAAAATAAAG TERM 818 671349 - 671323 - f 83 -11 -3.09787 | opp_overlap 671329, overlap 671322 TTAAATCATAGAAAG TGCAAACGTTTT CGT AAAACGTTTGCC TAAATAAAAATAAAG ptsG 671374 - 673554 + | PTS system, IIABC components TERM 819 673562 - 673587 + F 100 -12 -4.17048 | opp_overlap 673559 AATTGTAATATACTT GAGGTTGGAA GCTGTA TTCCAACCTC TTATTTTGGGAGAAA spr0669 673606 - 674421 + | hypothetical protein TERM 820 674434 - 674457 + F 77 -6 -4.71426 | opp_overlap 674432 674434 TAATAACTGAAAAGA GGTTGGAACT ATAA AATTCCAGCC TTTTCTTACTAGAGA TERM 821 675740 - 675728 - g 76 -3.4 -5.25803 | AACCGTGAGAAAAAA CAAG ATAAA CTTG ATATCGAAATGATTG rheB 674561 - 675904 + | ATP-dependent RNA helicase TERM 822 675913 - 675933 + F 88 -7.6 -5.04601 | opp_overlap 675912 ATTTTAATAGAAATT GTTGGAGT ACTGA GCTCCAAC TTTTTGCTTTATGAG metK 676119 - 677309 + | S-adenosylmethionine synthetase TERM 823 677318 - 677334 + F 95 -8.7 -5.47914 | opp_overlap 677320 AAAATAAGATTTTAA GAGGGGA ACG TCCTCTC TTTTTTATAGTTTTT pyrDA 677862 - 678797 + | dihydroorotate dehydrogenase 1A holA 678831 - 679868 + | DNA polymerase III subunit delta TERM 824 679887 - 679913 + F 100 -10.8 -4.30833 | opp_overlap 679887 TTGTTGAAACTACAA CCCGCGTCAGGA CTA TCTTGTCGTGGG TTTCTTGCTGATTTG TERM 825 680527 - 680512 - g 76 -3.2 -5.1925 | TCAGAAGGTAAAAAA CCAATC TTGG GCTTGG ACGTTTGGGAACATG sodA 680041 - 680646 + | superoxide dismutase, manganese-dependent TERM 826 680658 - 680676 + F 90 -8.2 -5.1925 | ATAATGATAGTTGGA GGGAAGAA TTG TTCTTCTC TTTTTTAGGTTATAA TERM 827 680699 - 680718 + F 93 -7.9 -5.56112 | opp_overlap 680692 GGTTATAAGATTCTG GTCTGAC AAAATC GTCAGAC TTTTTTCATTTTTAT spr0675 680803 - 681333 + | hypothetical protein TERM 828 682424 - 682401 - g 71 -6.6 -4.08221 | overlap 682402 TCTAACACAATGAAA CGTGACCGCC AGAA GGCAGTCGCA GAGGTAAATCCGTAA spr0676 681354 - 682439 + | hypothetical protein TERM 829 682540 - 682567 + G 87 -4.8 -5.48213 | GAACAATCGGGAACT CCAGGTATTCAG CATC TTGGACGCCTGG TTTTTCTTTTGACTC spr0677 682441 - 682908 + | hypothetical protein TERM 830 684383 - 684400 + G 70 -5.5 -4.37886 | GGATCTATCCTTATG GTCTGCC ACGA GCCAGAC TTTTATGAAGGCTGG ABC-NBD 682910 - 684451 + | ABC transporter ATP-binding protein TERM 831 684460 - 684504 + T 70 -4.6 -4.70879 | gap 1, opp_overlap 684470, overlap 684461 684470 AACTTAAGAATGAGA GTAAAAGAAATACAGTA-CCG AATG TGGATACTGTATTTTTTTTGG TTTTTAAGATTTAAA TERM 832 684461 - 684503 + T 72 -8.1 -3.41804 | gap 1, opp_overlap 684470, overlap 684460 684470 ACTTAAGAATGAGAG TAAAAGAAATACAGTA-CCG AATG TGGATACTGTATTTTTTTTG GTTTTTAAGATTTAA TERM 833 684494 - 684470 - T 80 -6.5 -4.75288 | opp_overlap 684461 684460 684470 TGAGAGTAAAAGAAA TACAGTACCGA ATG TGGATACTGTA TTTTTTTTGGTTTTT TERM 834 684470 - 684494 + T 93 -4.4 -6.11019 | gap 1, opp_overlap 684470, overlap 684461 684460 TGAGAGTAAAAGAAA TACAGTA-CCG AATG TGGATACTGTA TTTTTTTTGGTTTTT ppiA 685311 - 684508 - | peptidyl-prolyl cis-trans isomerase, cyclophilin-type spr0680 685616 - 685395 - | hypothetical protein spr0681 685734 - 685504 - | hypothetical protein TERM 835 685614 - 685601 - G 74 -3.8 -5.0538 | TGCCATTGTAAAAAA GTCC ATAGAA GGAC ATGAAAGTGACCAGC TERM 836 685933 - 685958 + H 100 -10.5 -5.77632 | opp_overlap 685933 ATACAGCATTTACAA CACTTCATGGT TCAC ACCATGGGGTG TTTTTTTATGATTTT rpsP 686482 - 686754 + | 30S ribosomal protein S16 spr0683 686774 - 687013 + | hypothetical protein TERM 837 687019 - 687036 + F 100 -9.1 -5.37043 | opp_overlap 687018 CGAAAAATAAGAAGG GCGGGAC GGAT GTCTCGC TTTTTTGTGTGGAAT spr0684 687578 - 688018 + | hypothetical protein spr0685 688019 - 688378 + | hypothetical protein TERM 838 688627 - 688613 - g 71 -7.2 -3.87551 | overlap 688626 ATTATTAAATTCAAA GATATG TAC CATATC AATACTATCGAAAAG rimM 688409 - 688927 + | 16S rRNA-processing protein TERM 839 689068 - 689045 - g 76 -7.4 -4.19879 | AGAAAATGCTGAAAA GGCCCGTCAT GTAG ATGATGAGCC CTACGGAGGCGGTCA trmD 688917 - 689636 + | tRNA (guanine-N(1)-)-methyltransferase spr0688 689648 - 689986 + | hypothetical protein TERM 840 689994 - 690022 + T 100 -12.5 -4.24887 | opp_overlap 689994 TTCGCTAAGAAAAAA GAGTGGGATGAAG CAA CTACATCTCACTC TTTCTTAAATCTATT TERM 841 690022 - 689994 - T 100 -10.3 -5.4505 | opp_overlap 689994 TTCGCTAAGAAAAAA GAGTGGGATGAAG CAA CTACATCTCACTC TTTCTTAAATCTATT spr0689 690337 - 690017 - | hypothetical protein TERM 842 690405 - 690375 - H 71 -5.6 -4.61147 | overlap 690377 CAATATTATATAAAA TTTTCCTAAAATCT ACA AGATTTTACGAATA AACTAATGAAACTAA spr0690 690411 - 690650 + | hypothetical protein TERM 843 690708 - 690720 + T 73 -7.7 -3.72695 | CCGTATGTATGGTTA CTGAC TTC GTCAG TTTCATCCACAACCT TERM 844 690752 - 690734 - T 78 -10.4 -2.61383 | overlap 690733 AGTTTCATCCACAAC CTCAAAAC AGT GTTTTGAG CAGCCTGCGGCTAGC TERM 845 690821 - 690849 + T 89 -7.5 -5.30155 | opp_overlap 690821 TTCAAAATAAAAAAA GGATATTGAGTCA TGA TAACTCGGTATCC TTTTTTAGTTAGTAA TERM 846 690849 - 690821 - T 93 -5.3 -6.09196 | opp_overlap 690821 TTCAAAATAAAAAAA GGATATTGAGTCA TGA TAACTCGGTATCC TTTTTTAGTTAGTAA bioY 691390 - 690854 - | biotin synthase TERM 847 691094 - 691063 - G 70 -3 -5.06414 | GGTTTGCAAGAAAAA TCTTAACAACACCA CTCT TGCTGTTGGTTAGA GAGGAAGTAAGTCCA TERM 848 691550 - 691575 + r 75 -4.7 -4.94058 | opp_overlap 691550, overlap 691545 AAAATCATTAAAAAA GAAGCAGACAT ATTT ATATCAGCTTC TTTTGTTTCGATTAA TERM 849 691575 - 691550 - R 89 -6.9 -5.25656 | opp_overlap 691550 691545 AAAATCATTAAAAAA GAAGCAGACAT ATTT ATATCAGCTTC TTTTGTTTCGATTAA gor 692933 - 691587 - | glutathione reductase TERM 850 693324 - 693339 + G 71 -7.6 -3.9461 | opp_overlap 693324 CAGACTGCTCTAAAA GATGAG CCTA CTCATC TTGTTGTTGCCAAGG TERM 851 693339 - 693324 - g 73 -7.6 -4.09243 | opp_overlap 693324 CAGACTGCTCTAAAA GATGAG CCTA CTCATC TTGTTGTTGCCAAGG spr0693 693198 - 694397 + | hypothetical protein TERM 852 694978 - 694967 - g 76 -4.4 -5.05712 | ATAAAGAAGGAAAAA CCAT TATC ATGG TAACGCATGAGCCTG ABC-NBD 694381 - 695082 + | ABC transporter ATP-binding protein - unknown substrate spr0695 695084 - 696343 + | hypothetical protein TERM 853 696373 - 696350 - f 70 -8.2 -3.33361 | opp_overlap 696350, overlap 696353 TATGAATGAGATCAA CAAGATGGAC ACTC GTCTATCTTG TTTTTGTATGGATTT TERM 854 696350 - 696373 + F 100 -10.4 -5.01546 | opp_overlap 696350 696353 TATGAATGAGATCAA CAAGATGGAC ACTC GTCTATCTTG TTTTTGTATGGATTT metG 696467 - 698464 + | methionyl-tRNA synthetase TERM 855 698472 - 698495 + F 100 -8.2 -6.02919 | opp_overlap 698472 698474 TTGGGTAAAAGTAGA CAGGACTAGT TCAG GCTAGTTCTG TTTTTTTATTTATAC TERM 856 698555 - 698573 + F 78 -10.4 -2.61383 | overlap 698554 GCTAGCCGCAGGTTG CTCAAAAC ACT GTTTTGAG GTTGTAGATAGAACT TERM 857 698602 - 698584 - f 76 -9.6 -2.87931 | opp_overlap 698599 698600, overlap 698587 698599 TTGAGGTTGTAGATA GAACTGAC GAA GTCAGCTC AAAACACTGTTTTGA TERM 858 698599 - 698587 - f 71 -7.7 -3.58905 | overlap 698584 AGGTTGTAGATAGAA CTGAC GAA GTCAG CTCAAAACACTGTTT TERM 859 698600 - 698618 + F 78 -10.4 -2.61383 | opp_overlap 698584 698599, overlap 698599 AACTGACGAAGTCAG CTCAAAAC ACT GTTTTGAG GTTGTAGATGAAACT TERM 860 698644 - 698632 - f 73 -7.7 -3.83205 | AGGTTGTAGATGAAA CTGAC GAA GTCAG TAACCATACATACGG spr0697 698792 - 699115 + | hypothetical protein TERM 861 699936 - 699963 + G 77 -10 -3.40403 | opp_overlap 699943, overlap 699943 GGAGTGAAGTACAGT CAAAAAGCCGTT GCAA AGCGGTTTTTTG TTATAATGAAGGGAA TERM 862 699943 - 699956 + G 89 -4.5 -5.58179 | opp_overlap 699943, overlap 699936 AGTACAGTCAAAAAG CCGTT GCAA AGCGG TTTTTTGTTATAATG spr0698 699119 - 699994 + | hypothetical protein spr0699 700006 - 700935 + | hypothetical protein TERM 863 700971 - 700984 + F 91 -4.5 -5.89921 | opp_overlap 700971 ATCACAGTCAAAAAG CCGTT TTAA AGCGG TTTTTTTGTTATAAT spr0700 701014 - 701271 + | hypothetical protein fabG 701264 - 701962 + | 3-ketoacyl-(acyl-carrier-protein) reductase spr0702 701973 - 702452 + | MutT/nudix family protein TERM 864 702877 - 702887 + G 81 -5.4 -5.07652 | CAGGGGGATTTTGAG TCCT ATC AGGA TTTTGTTTTAAAAGG spr0703 702460 - 703188 + | hypothetical protein spr0704 703224 - 704099 + | hypothetical protein spr0705 704074 - 704514 + | hypothetical protein pepN 704637 - 707183 + | aminopeptidase N TERM 865 707207 - 707240 + F 84 -4 -5.75342 | gap 1 AAAATAAAAAGAAAA CTCAGCTATCT-CAT GTAAA ATGCAGAGAGTTGAG TTTTTTTTAAGGCAA TERM 866 707330 - 707348 + G 77 -6.1 -4.61527 | GGATGACCTAGGTCT GTCAAAT TCAGT ATTTGAC TTTTTAGACGATTTT ciaR 707226 - 707966 + | DNA-binding response regulator CiaR ciaH 707956 - 709290 + | sensor histidine kinase CiaH TERM 867 709321 - 709288 - Tf 91 -5.3 -5.93252 | opp_overlap 709294, overlap 709294 TCTAAAAAGAAAAAA TAAAAATATCGCTCC AATT GGGGCGATATTTTGG ATTTATCTTCTACGT TERM 868 709315 - 709294 - Tf 100 -8.7 -5.84011 | opp_overlap 709294, overlap 709288 AAGAAAAAATAAAAA TATCGCTCC AATT GGGGCGATA TTTTGGATTTATCTT TERM 869 709294 - 709315 + TF 100 -10.9 -4.42081 | opp_overlap 709294 709288 AAGAAAAAATAAAAA TATCGCTCC AATT GGGGCGATA TTTTGGATTTATCTT spr0709 709611 - 709324 - | hypothetical protein spr0710 709610 - 710680 + | hypothetical protein TERM 870 710694 - 710729 + FH 88 -7.8 -4.97461 | gap 1 AAAATACATGATTCG TTGAGAGAAGGAA-GAT GCA AACATTTCTTCTCTCAA TTTTTCGTATTTCTT TERM 871 710843 - 710856 + FH 84 -3.7 -5.59357 | ATCCTATGTTTGCAG GTGCC AAAT GGCCC TTTTTTTGGTATAAT TERM 872 710899 - 710887 - g 77 -6.3 -4.48987 | opp_overlap 710887 710886 TTTTTATAATGAAAA CGATT GGT AATCG CTATGTTGTGGTGGA dinG 710880 - 713330 + | bifunctional ATP-dependent DNA helicase/DNA polymerase III subunit epsilon TERM 873 713799 - 713810 + G 73 -2.2 -5.28166 | GAATGGAGACGCACG GTTC CGCT GGAC TTTTTGTTAATTTTC rodA 713340 - 714590 + | rod shape-determining protein RodA, putative thiJ 714601 - 715155 + | 4-methyl-5(b-hydroxyethyl)-thiazole monophosphate biosynthesis protein, putative TERM 874 715158 - 715174 + F 84 -5.8 -5.36441 | opp_overlap 715158 715153 TAAAAATCAGTAAAA CGGGAG TTATT CTCTCG TTTTTTATGTGGAAA gph 715231 - 715803 + | phosphoglycolate phosphatase TERM 875 716106 - 716095 - g 81 -5.8 -5.17353 | opp_overlap 716094 ATATTCAGGAAAAAA CAGG TCGT CCTG CTGTTGAGACCGTCT gyrB 715818 - 717764 + | DNA gyrase subunit B ezrA 717819 - 719573 + | septation ring formation regulator EzrA TERM 876 719621 - 719579 - f 76 -6.6 -4.63218 | opp_overlap 719579 TCGTTTTTAATAAAA GAAAAAGATTTTATTGTG TGAGGAG CAGAATCAAATCTTTTTC TATAGTTGTGGGGAG TERM 877 719900 - 719941 + F 100 -9.7 -4.57581 | gap 1, opp_overlap 719900 AAGTCTATTGAAAAA TCTCCAGACTAGAGAACT CACGGAT AGTTC-CTAATCTGGAGA TTTCTTATTTGCACT TERM 878 719941 - 719900 - f 100 -11.9 -4.67011 | gap 1, opp_overlap 719900 AAGTCTATTGAAAAA TCTCCAGACTAGAGAACT CACGGAT AGTTC-CTAATCTGGAGA TTTCTTATTTGCACT transposase_C 720316 - 720720 + | transposase transposase_D 720608 - 721261 + | transposase TERM 879 721304 - 721271 - T 90 -8.3 -4.93898 | opp_overlap 721275, overlap 721275 AGATGAGTATAAAAA GAAAGTCCTCATTTC AATA GAAATCACGACTTTC TGATAGATTTATTTT transposase_E 721526 - 721347 - | transposase spr0720 722194 - 721895 - | hypothetical protein spr0721 722781 - 722359 - | MutT/nudix family protein TERM 880 722695 - 722714 + g 72 -3.6 -5.05606 | opp_overlap 722687 722684 722683 722709, overlap 722683 722697 GAACCAAGCACCATT TGGTTCTT GAAC AAGAACAA TTTGTTTTTGTTCAG TERM 881 722944 - 722922 - g 72 -3.4 -5.0133 | GATTTTCGTAAAAAA GTTCTCTC TTATTGT GAGCGAAC AGGTAGTATAACAGA transposase_A 722874 - 723221 + | transposase transposase_B 723400 - 723483 + | degenerate transposase TERM 882 723470 - 723492 + F 71 -6.4 -4.1891 | CGATGACGAGCGACT TTTTTGAAGC TTA GTTTCAGAAA TTTCTCTTACCAACA TERM 883 723666 - 723713 + G 95 -11.5 -4.83518 | opp_overlap 723666 723669, overlap 723668 723669 GGCTCATATCAAAAA GCACCTCATAAAAGGTATTAC CAAGTT GCAATACCTTTTATGAGGCTC TTTTGTCTTGTTCTT TERM 884 723713 - 723666 - g 100 -15.9 -4.8048 | opp_overlap 723666 723668 723669, overlap 723669 GGCTCATATCAAAAA GCACCTCATAAAAGGTATTAC CAAGTT GCAATACCTTTTATGAGGCTC TTTTGTCTTGTTCTT TERM 885 723668 - 723711 + G 93 -12.7 -4.00463 | opp_overlap 723666 723669, overlap 723666 723669 CTCATATCAAAAAGC ACCTCATAAAAGGTATTAC CAAGTT GCAATACCTTTTATGAGGC TCTTTTGTCTTGTTC TERM 886 723710 - 723669 - g 100 -18.4 -3.30658 | opp_overlap 723668 723666 723669, overlap 723666 TCATATCAAAAAGCA CCTCATAAAAGGTATTAC CAAGTT GCAATACCTTTTATGAGG CTCTTTTGTCTTGTT TERM 887 723669 - 723710 + G 100 -16.2 -2.98651 | opp_overlap 723669 723666, overlap 723668 723666 TCATATCAAAAAGCA CCTCATAAAAGGTATTAC CAAGTT GCAATACCTTTTATGAGG CTCTTTTGTCTTGTT transposase_B 723532 - 723708 + | degenerate transposase TERM 888 723932 - 723905 - T 84 -5.7 -5.52986 | opp_overlap 723930 ATTTTAGTAAAAAAA GAAGCAGAAAA ATTTCA TTTTCTACTCC TTTTCTATAGGATTT TERM 889 723930 - 723944 + T 72 -2.8 -5.21459 | opp_overlap 723905 AATTTCATTTTCTAC TCCTTT TCT ATAGGA TTTATTTTTCTTTTT clpE 726204 - 723946 - | ATP dependent protease TERM 890 724983 - 724993 + g 79 -3.2 -5.49568 | TGATAGGAGTATCCT GGTC TGT GATC TTTTTCTTTTGCATT TERM 891 726115 - 726128 + g 83 -5.3 -5.18409 | AATCTTATAGCAGTT TTGAC AGAG GTCAA TTTGTTTTTGTTTTC TERM 892 726391 - 726369 - R 93 -7.8 -5.67063 | opp_overlap 726369 TGGACTATAAAAAAA TCCTATTTGT GAG ACAAAAAGGA TTTTACTTAGACATG TERM 893 726369 - 726391 + r 81 -7.8 -4.41494 | opp_overlap 726369 TGGACTATAAAAAAA TCCTATTTGT GAG ACAAAAAGGA TTTTACTTAGACATG TERM 894 726403 - 726425 + r 81 -7.6 -4.30014 | opp_overlap 726405, overlap 726406 AGGATTTTACTTAGA CATGCAGGGA CAA TCCCAGCTTG TTTTAGATTAGTAGA TERM 895 726406 - 726422 + r 78 -7.9 -4.26461 | opp_overlap 726405, overlap 726403 ATTTTACTTAGACAT GCAGGGA CAA TCCCAGC TTGTTTTAGATTAGT spr0726 726663 - 726433 - | hypothetical protein TERM 896 726806 - 726789 - H 70 -2.1 -5.28826 | opp_overlap 726782, overlap 726790 AAATTGGATAAAAAA TTTAAAT TTTA ATTCAAA ACATGTTATAATCAT glnP 726847 - 727536 + | amino acid ABC transporter permease glnQ 727536 - 728270 + | amino acid ABC transporter ATP-binding protein folD 728361 - 729281 + | methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase TERM 897 729372 - 729387 + F 74 -3.2 -5.25699 | TATAAGATTACAAAA GGAGGT CTGC GTCTCC TTTTTATTGTATAAT spr0730 729423 - 730295 + | hypothetical protein rpiA 730520 - 731260 + | ribose-5-phosphate isomerase A TERM 898 732194 - 732208 + GF 81 -10 -3.38088 | CCATCGTCGTAATGC TCACGG TTA CCGTGA TTGCTTGCATGAGTT deoB 731211 - 732485 + | phosphopentomutase spr0733 732487 - 732897 + | hypothetical protein pnp 733045 - 733854 + | purine nucleoside phosphorylase TERM 899 734404 - 734388 - g 90 -10.9 -4.208 | overlap 734401 CTCCAAAACTAGAAA CTCCTCT TAG AGAGGAG CCAAGACTAGCTCCT spr0735 734318 - 735061 + | hypothetical protein spr0736 735107 - 735310 + | hypothetical protein spr0737 735335 - 735847 + | hemolysin-related protein TERM 900 735993 - 736013 + F 72 -8.3 -3.35996 | overlap 735994 AACTAGCCGCAGGTT GCTCAAAGC ACT GCTTTGAGG TTGTAGATAAGACTG TERM 901 735994 - 736012 + F 84 -11.8 -2.61383 | overlap 735993 ACTAGCCGCAGGTTG CTCAAAGC ACT GCTTTGAG GTTGTAGATAAGACT TERM 902 736040 - 736024 - f 87 -10.9 -3.48924 | opp_overlap 736021 TGAGGTTGTAGATAA GACTGAC GAA GTCAGTC ACATATATAATCCAA TERM 903 736951 - 736961 + G 73 -5.4 -4.52047 | TGGTATGACTACTCA CGTT GGG AACG TTTTGTCATCTGATG deoD 736505 - 737215 + | purine nucleoside phosphorylase (inosine phosphorylase) flaR 737762 - 737238 - | topology modulation protein TERM 904 737810 - 737795 - R 80 -2.5 -5.71712 | TTGGAGACAAAAAAA CAGCC TCTATG GACTG TTTCTTATTTAGCAA rpsT 738051 - 737815 - | 30S ribosomal protein S20 TERM 905 737942 - 737952 + g 70 -5.4 -4.38712 | TCTTCAGATGGGTTT GCTT CGA AAGC TTTTATAGCAGTACG coaA 739069 - 738119 - | pantothenate kinase spr0742 739237 - 739677 + | hypothetical protein TERM 906 739772 - 739824 + F 70 -4.3 -4.81863 | overlap 739773 ATTATTTATAAGTGT TGAAAGAGATTGAAGAAAATGGCTT CGT GACTCGCTTTCTTCGGTCTTTTTCG TTTTATTATCAATTT TERM 907 740027 - 740005 - g 100 -12.2 -4.71426 | opp_overlap 740005 TTTTTAGCAAGAAAA TAGTTGACTT TGG AAGTCAACTA TTGCTCAAGTGTCTT TERM 908 740005 - 740027 + G 83 -12.2 -3.18507 | opp_overlap 740005 TTTTTAGCAAGAAAA TAGTTGACTT TGG AAGTCAACTA TTGCTCAAGTGTCTT spr0743 739884 - 740474 + | hypothetical protein TERM 909 740558 - 740574 + G 75 -9.5 -3.35934 | GTAGAAGGCTATGTG TCAGGAA CTG TTCCTGA TTATCAGATGTCTGC pdp 740471 - 741748 + | pyrimidine-nucleoside phosphorylase deoC 741766 - 742428 + | deoxyribose-phosphate aldolase TERM 910 742755 - 742745 - g 70 -5.4 -4.45168 | overlap 742746 GTCGCAAAAGATAAA TCGA CGG TCGA GATGACGGTCGGGGA cdd 742415 - 742804 + | cytidine deaminase spr0747 742822 - 743946 + | hypothetical protein TERM 911 743971 - 743985 + F 100 -12.8 -5.055 | opp_overlap 743971 GTCATTTCTTAGGAA GCGGCC AAG GGCCGC TTTTTTAAGAGTTGA TERM 912 743985 - 743971 - f 91 -12.8 -3.14931 | opp_overlap 743971 GTCATTTCTTAGGAA GCGGCC AAG GGCCGC TTTTTTAAGAGTTGA TERM 913 745333 - 745323 - gf 85 -5.4 -5.24551 | GGAAATCAACAAAAA GCAA TTA TTGC TCGTGAAATTGATCG ABC-NBD 744090 - 745625 + | sugar ABC transporter, ATP-binding protein TERM 914 745829 - 745841 + GF 70 -5.5 -4.44046 | TTGGTTTTGCGGTTG CCAGT CGA GCTGG TTTCTTTAACGTCGG ABC-MSP 745591 - 746676 + | sugar ABC transporter, permease protein, putative ABC-MSP 746679 - 747635 + | sugar ABC transporter, permease protein, putative TERM 915 747671 - 747711 + F 100 -12.8 -5.19328 | opp_overlap 747650 747668, overlap 747673 CCAATGACTGAACTG CCCCCCAAAAGTTAGA CAGAAAAAA TCTAACTTTTGGGGTG TTTTTATTATGAAAT TERM 916 747673 - 747709 + F 100 -14 -4.22377 | opp_overlap 747668, overlap 747671 AATGACTGAACTGCC CCCCAAAAGTTAGA CAGAAAAAA TCTAACTTTTGGGG TGTTTTTATTATGAA IS861-truncation 747720 - 747932 + | degenerate transposase (orf1) IS861-truncation 748068 - 748235 + | degenerate transposase (orf1) IS861-truncation 748235 - 748603 + | degenerate transposase (orf2) TERM 917 749058 - 749026 - g 93 -10 -4.69549 | opp_overlap 749026 AAGGTAAAACTAAAA GGACTTAGCCCTGT GCAAT ACAGAACTAAATCC TTTGGATAAATTATT IS861-truncation 748579 - 749067 + | degenerate transposase (orf2) spr0755 749751 - 749110 - | putative glycerol-3-phosphate acyltransferase PlsY TERM 918 749798 - 749784 - H 100 -10 -4.88405 | overlap 749787 AATTGGGAAAGAAAA GCAGAG AAT CTCTGC TGAAATTGTCACATC TERM 919 750421 - 750395 - g 89 -10.2 -4.19953 | CACTCAAGTCTAAAA CAGGCACCAAAG TTA CTTTTATGCCTG ACGCGACTATCTTTT parE 749887 - 751830 + | DNA topoisomerase IV subunit B TERM 920 753576 - 753564 - g 70 -7.7 -3.71848 | opp_overlap 753573 GTCTTGCAGGAAGAA GAAGC AGA GCTTC GTGAGAAGATTGCTA parC 752241 - 754721 + | DNA topoisomerase IV subunit A ilvE 754851 - 755873 + | branched-chain amino acid aminotransferase TERM 921 756593 - 756583 - g 93 -5.4 -5.61881 | TGGCAAAAAGAAAAA TTGG AAT CCAA TAGCAAATACCAAAA ABC-SBP-internal-deletion 755929 - 756633 + | ABC transporter substrate-binding protein - oligopeptid transport, internal deletion spr0760 756677 - 757387 + | hypothetical protein TERM 922 757490 - 757478 - g 71 -4.1 -4.84918 | overlap 757482 GTTATAAAGATAAAA CAAAC CCA GTTCG ACTTGGGACATCTGC TERM 923 757496 - 757482 - g 71 -4.2 -4.91778 | overlap 757478 TAAAGATAAAACAAA CCCAGT TCG ACTTGG GACATCTGCATTTTG spr0761 757384 - 758307 + | hypothetical protein pcp 758322 - 758966 + | pyrrolidone-carboxylate peptidase TERM 924 759073 - 759046 - f 100 -12.2 -4.52589 | opp_overlap 759046 GTTGTTTACATAAAA CTCTATATCAGA GAAG CCTGATATAGAG TTTTTTCTTGCTAGT TERM 925 759046 - 759073 + F 100 -11.5 -5.52023 | opp_overlap 759046 GTTGTTTACATAAAA CTCTATATCAG AGAAGC CTGATATAGAG TTTTTTCTTGCTAGT spr0763 759134 - 759364 + | hypothetical protein TERM 926 760839 - 760829 - g 76 -2.4 -5.51353 | CAAAAAGAAGAAAAA CGTG CTG CTCG TCCACGTCGTCCAAG rpsA 759737 - 760939 + | 30S ribosomal protein S1 TERM 927 760983 - 760961 - T 82 -7.8 -4.54477 | opp_overlap 760956 760961, overlap 760956 TGAAAATTCACAAAA TCCTTTGTTT ACT AAACAAGGGA TTTTTCTGGCTCTTT TERM 928 760961 - 760983 + T 100 -10 -4.92363 | opp_overlap 760961 760956, overlap 760956 TGAAAATTCACAAAA TCCTTTGTTT ACT AAACAAGGGA TTTTTCTGGCTCTTT TERM 929 761084 - 761106 + T 74 -3.4 -5.27779 | opp_overlap 761088, overlap 761088 GTCAGCTAAGCTCGA TAAAGGACAA AAT TCGTCCTTTC TTTTTTGATGTTCAG TERM 930 761088 - 761102 + T 76 -4.2 -5.10526 | opp_overlap 761088, overlap 761084 GCTAAGCTCGATAAA GGACAA AAT TCGTCC TTTCTTTTTTGATGT IS1167-truncation 761214 - 761074 - | degenerate transposase (orf2) IS1167-truncation 761602 - 761198 - | degenerate transposase (orf2) TERM 931 761474 - 761493 + g 70 -9.4 -2.64981 | opp_overlap 761472 CATGCGAAAAGTAGG GCGATAAA AACG TTTATCGC TGAGTTTACGGCTAT TERM 932 761682 - 761668 - R 77 -8.6 -3.6502 | opp_overlap 761668 CATTCGGGAGTGAAA CAGTCT GGG AGACTG TTTCAGCCTGAGCCT TERM 933 761668 - 761682 + r 77 -8.6 -3.57263 | opp_overlap 761668 CATTCGGGAGTGAAA CAGTCT GGG AGACTG TTTCAGCCTGAGCCT IS1167 762401 - 761883 - | transposase TERM 934 762527 - 762474 - H 100 -11.4 -4.96848 | gap 1, overlap 762476 TTTTCTACACAAAAA TAGGCTCCATAATATCTATAA-GGG ATTTA CCCACTACAAATATTATAGAGCCCA AAATCCTTTGTTTAC TERM 935 762525 - 762476 - H 100 -11.8 -4.11141 | gap 1, overlap 762474 TTCTACACAAAAATA GGCTCCATAATATCTATAA-GGG ATTTA CCCACTACAAATATTATAGAGCC CAAAATCCTTTGTTT TERM 936 762531 - 762553 + H 100 -10 -5.58522 | opp_overlap 762531, overlap 762547 TTATAGAGCCCAAAA TCCTTTGTTT ACT AAACAAGGGA TTTTTCTTTTGTCTC TERM 937 762553 - 762531 - H 78 -7.8 -4.18401 | opp_overlap 762531 762547 TTATAGAGCCCAAAA TCCTTTGTTT ACT AAACAAGGGA TTTTTCTTTTGTCTC spr0768 762595 - 763092 + | hypothetical protein dnaX 763092 - 764747 + | DNA polymerase III subunits gamma and tau TERM 938 764853 - 764873 + G 76 -7.5 -4.14013 | opp_overlap 764841, overlap 764871 GAAGCCTGGATGACT GGCCGCTAT ATT ATGGCAGCC TTTTGGGCAATTTTA spr0770 764775 - 764969 + | hypothetical protein TERM 939 764995 - 765005 + F 100 -6.8 -6.17268 | opp_overlap 764995 764990 CCAGACAAAATCAAA GCCT TTT AGGC TTTTTTTTGTTATAC TERM 940 765005 - 764995 - f 74 -6.8 -4.30161 | opp_overlap 764995, overlap 764990 CCAGACAAAATCAAA GCCT TTT AGGC TTTTTTTTGTTATAC ABC-NBD 765098 - 765889 + | ABC transporter ATP-binding protein - unknown substrate spr0772 765917 - 767179 + | hypothetical protein TERM 941 767814 - 767834 + G 83 -7.5 -4.7416 | CATATGAAGATTGAT GTCCAGGAC TTG GATCTGGAC TTTTTCGCCTTTTCG spr0773 767190 - 768416 + | hypothetical protein nifU 768403 - 768843 + | NifU protein TERM 942 768865 - 768838 - f 70 -2.2 -5.28166 | gap 1, opp_overlap 768841 768844, overlap 768841 768844 GAAAATCAAGAAAAA CAGTAAGACAA GTTTCTT TTGTCTTA-TG AATTATTAGAAATGA spr0775 768897 - 770309 + | hypothetical protein TERM 943 770379 - 770391 + T 73 -7.7 -3.83205 | TCGTATGTATGGTTA CTGAC TTC GTCAG TTTCATCTACAACCT TERM 944 770423 - 770405 - T 78 -10.4 -2.61383 | overlap 770404 AGTTTCATCTACAAC CTCAAAAC AGT GTTTTGAG CAACCTGCGGCTAGC TERM 945 770475 - 770512 + T 84 -11.7 -3.02946 | gap 1, opp_overlap 770485, overlap 770485 TTGAAGATGAACTTG TATCAAAAAATCGCGGTT TAA AATCGCGATTTTTT-ATA ATTTCTCGTTAACAA TERM 946 770503 - 770485 - T 88 -7.4 -5.14965 | opp_overlap 770485 770475 ACTTGTATCAAAAAA TCGCGGTT TAA AATCGCGA TTTTTTATAATTTCT TERM 947 770485 - 770503 + T 100 -9.6 -5.43621 | opp_overlap 770485, overlap 770475 ACTTGTATCAAAAAA TCGCGGTT TAA AATCGCGA TTTTTTATAATTTCT dacA 771749 - 770508 - | D-alanyl-D-alanine carboxypeptidase TERM 948 771422 - 771404 - G 81 -11.8 -2.71268 | opp_overlap 771406, overlap 771401 771406 TGGCACTAGATACCA GAGTTGCT TCA AGCAACTC TTCGACAGTATAATT TERM 949 771613 - 771625 + g 71 -6.3 -4.15543 | GGTTGCGTTGCATCC TTCTC ATA GAGAA TTTTACCAGTATTTG TERM 950 772154 - 772179 + G 79 -8.5 -3.9712 | GATTAATCAGTTATC TAGTTTGATTA TATC TAGTCAAACTA TTTATAGTCGAGTAC TERM 951 772456 - 772472 + G 73 -8.7 -3.64283 | TTCTAAAGAGGGATC GCTTGCA TAT TGCAGGC TTATTAAAGAATTTA spr0777 771852 - 772961 + | hypothetical protein TERM 952 772965 - 772979 + F 82 -5.7 -5.33405 | opp_overlap 772964 772965 TTAGCTAAGTAAAAG TCAGG AGAAC CCTGA TTTTTCTTTACTGGA TERM 953 773093 - 773127 + F 72 -5.9 -4.34947 | gap 2, opp_overlap 773093 TAAAAATCGAAAAAA CCAGTGGAA-TT-CCGT GTC AGGGTAAGTTCCACTGG TTTTCATAGTCTATT TERM 954 773127 - 773093 - f 84 -5.9 -5.30575 | gap 2, opp_overlap 773093 TAAAAATCGAAAAAA CCAGTGGAA-TT-CCGT GTC AGGGTAAGTTCCACTGG TTTTCATAGTCTATT TERM 955 773988 - 774003 + F 93 -4.7 -5.98675 | opp_overlap 773988 CATTCCTTGGTAAAA CGTTG TTAAAT CAACG TTTTTTATTTTTATC TERM 956 774116 - 774095 - f 93 -7.3 -5.43487 | AAAGGATAGAAAAAA GGATACAAC ATTT GTCGCATCC TAAAAATAATCTTTT fruR 774386 - 775126 + | lactose phosphotransferase system repressor TERM 957 775463 - 775424 - g 70 -5.8 -4.46976 | gap 1, overlap 775428 ACCAAGAAACAGAAA TC-AACGGAACGGGTCCAA CTG TTGAACCGGTTCAGCTAGA AGAATTGAAAGCTAT TERM 958 775458 - 775428 - g 76 -9 -3.73525 | overlap 775424 AGAAACAGAAATCAA CGGAACGGGTCCAA CTG TTGAACCGGTTCAG CTAGAAGAATTGAAA TERM 959 775569 - 775594 + G 72 -10.5 -2.72036 | gap 1, overlap 775567 TAAGGATTTGATTTC CTTGACGCGCCA GAC TGGTGCG-CAAG TGGTCTGTGACTTTG fruB 775123 - 776034 + | 1-phosphofructokinase TERM 960 776258 - 776240 - g 72 -4.5 -4.8048 | opp_overlap 776245 GCCTCACAGCAAAAA CGCTGCT GTCAA AGAAGCG ACAGTTCTATTTGCT fruA 776031 - 777983 + | PTS system, fructose specific IIABC components TERM 961 778002 - 778023 + F 77 -5.1 -5.0916 | opp_overlap 778002 777997 778005 ATAGAAAAATGAAAA GATTGGACC GTTT GGTGCAGTC TTTTTCTCTTCCCGA TERM 962 778109 - 778097 - g 79 -9.1 -3.91959 | ATACAAGTACAACAA GACGG AGA CCGTC TAAAGCAGAACTGGA ftsK 778069 - 780372 + | SpoE family protein TERM 963 780407 - 780378 - T 100 -7.9 -5.97979 | opp_overlap 780378 ACAACAATAAAAAAA TAGCTTCTTTCCA AGTT TGGAGGGAAGCTA TTTTTCTGGCTATTG TERM 964 780378 - 780407 + T 100 -12.3 -4.91459 | opp_overlap 780378 ACAACAATAAAAAAA TAGCTTCTTTCCA AGTT TGGAGGGAAGCTA TTTTTCTGGCTATTG spr0782 780950 - 780417 - | hypothetical protein TERM 965 780918 - 780907 - G 76 -2.2 -5.51165 | overlap 780877 AAAATCTTAAAAAAA GAGA AATT TCCC TTTCTTGTCGCAAGC spr0783 780983 - 782125 + | pyridoxal-phosphate dependent aminotransferase thiI 782134 - 783348 + | thiamine biosynthesis protein ThiI TERM 966 783424 - 783389 - f 86 -5.6 -5.5943 | opp_overlap 783389 AAATCAGTAAAAAAA GTTAGTTTTTTCTCTA AAAA CAGGTAAAAAACTAAC TTTTTTTATTTTTAT TERM 967 783389 - 783424 + F 100 -7.1 -6.23317 | opp_overlap 783389 AAATCAGTAAAAAAA GTTAGTTTTTTCTCT AAAAAC AGGTAAAAAACTAAC TTTTTTTATTTTTAT spr0785 783459 - 784307 + | hypothetical protein spr0787 785035 - 784604 - | hypothetical protein spr0786 784329 - 784664 + | hypothetical protein spr0788 784661 - 785068 + | hypothetical protein spr0789 785081 - 786247 + | hypothetical protein TERM 968 786256 - 786283 + F 89 -7.1 -5.23292 | opp_overlap 786254 786251 AGAATAAGAACTATC GGATTAAGGAA ATTAAC TCCCTTAATCC TTTTGTTTTGTCTGA TERM 969 786547 - 786567 + F 79 -9.1 -3.35996 | overlap 786541 786548 AGCTAGCCGCAGGTT TCTCAAAAC ACT GTTTTGAGG TTGTGGATAGAACTG TERM 970 786548 - 786566 + F 78 -10.4 -2.61383 | overlap 786541 786547 GCTAGCCGCAGGTTT CTCAAAAC ACT GTTTTGAG GTTGTGGATAGAACT hsdM 786755 - 788248 + | type I restriction-modification system M subunit hsdS 788261 - 788872 + | Type I restriction-modification enzyme 1, S subunit TERM 971 790960 - 790941 - g 71 -6.5 -4.15565 | TTGATGATTTTAAAA TTGAGGA GAAGTA TCCTCAA ATTGCGATTTCTGTC TERM 972 791205 - 791217 + G 73 -5.5 -4.53602 | GTCGTCACATTGTTT CGTTG ACT CAGCG TTTATTTAATATCAA hsdR 788951 - 792301 + | type I restriction-modification system R subunit TERM 973 792658 - 792676 + T 78 -10.4 -2.61383 | opp_overlap 792643 792657, overlap 792657 GACTGACGAAGTCAG CTCAAAAC ATG GTTTTGAG GTTGTAGATGAAACT TERM 974 792702 - 792690 - T 73 -7.7 -3.83205 | AGGTTGTAGATGAAA CTGAC GAA GTCAG TAACCATACCTACGG TERM 975 792828 - 792780 - T 100 -20.7 -2.97475 | opp_overlap 792780 792785, overlap 792785 CTTCCTAGGATAAAG CAAAACGCATAGTATCAAGGGTT TTC AACACTTGATACTATGCGTTTTC TGATGTTAAAGACTT TERM 976 792780 - 792828 + T 100 -20.7 -2.74371 | opp_overlap 792780 792785, overlap 792785 CTTCCTAGGATAAAG CAAAACGCATAGTATCAAGGGTT TTC AACACTTGATACTATGCGTTTTC TGATGTTAAAGACTT TERM 977 792785 - 792823 + T 100 -20.6 -4.55023 | opp_overlap 792780 792785, overlap 792780 TAGGATAAAGCAAAA CGCATAGTATCAAGGGTT TTC AACACTTGATACTATGCG TTTTCTGATGTTAAA TERM 978 792823 - 792785 - T 100 -20.6 -4.63479 | opp_overlap 792785 792780, overlap 792780 TAGGATAAAGCAAAA CGCATAGTATCAAGGGTT TTC AACACTTGATACTATGCG TTTTCTGATGTTAAA argR 793357 - 792887 - | arginine repressor pepXP 795761 - 793374 - | x-prolyl-dipeptidyl aminopeptidase TERM 979 793478 - 793490 + g 77 -7.7 -4.27465 | opp_overlap 793477 793478 TATAGAGGACTAAAC GGAGA GTG TCTCC TTCTTTTAGCTTGTA TERM 980 794614 - 794624 + g 70 -5.4 -4.35524 | AGATAGGAAAGTCCT GTTG TAG CAAC TTTTCCGTTTGACCA TERM 981 798654 - 798644 - g 70 -5.4 -4.39002 | opp_overlap 798644 798639 AAATTTGTCAGAAAA TAGC TAT GCTA TTATCTTGGTTGAAG dnaE 795966 - 799094 + | DNA polymerase III DnaE pfkA 799177 - 800184 + | 6-phosphofructokinase TERM 982 800783 - 800770 - g 73 -6.7 -4.19506 | AGTTGAAGTTGAAAA CGATG GTAT CATCG CTAAACAAAAAGGTG pykF 800243 - 801748 + | pyruvate kinase TERM 983 801797 - 801763 - T 72 -2.9 -5.38398 | gap 1, opp_overlap 801763 801784 801792 AGAAAAATATAAAAA CCTATCATATCCAGCT TTCT AGCCTG-TATGATGGG CTCTTTTTTTGTCCA TERM 984 801907 - 801919 + T 71 -7.7 -3.58905 | ACCGTATATATGTTA CTGAC TTC GTCAG TTCTATCTACAACCT TERM 985 801952 - 801932 - T 72 -8.3 -3.35996 | overlap 801933 CAGTTCTATCTACAA CCTCAAAGC AGT GCTTTGAGC AACCTGCGGCTAGCT TERM 986 801951 - 801933 - T 84 -11.8 -2.61383 | overlap 801932 AGTTCTATCTACAAC CTCAAAGC AGT GCTTTGAG CAACCTGCGGCTAGC spr0798 803119 - 802865 - | hypothetical protein spr0799 803555 - 804427 + | hypothetical protein spr0800 804440 - 804604 + | hypothetical protein IS1381-truncation 804917 - 804729 - | degenerate transposase (orf1) spr0802 805060 - 805371 + | hypothetical protein spr0803 805375 - 806091 + | hypothetical protein TERM 987 806203 - 806162 - T 93 -6 -5.9218 | gap 1, opp_overlap 806162 CATATAACAAAAAAA CGAACAGGCTCTTTTTCTG TTATT CAGAAGA-GAACTTGTTCG TTTTTATCTTGATTT TERM 988 806162 - 806203 + T 90 -8.2 -5.16206 | gap 1, opp_overlap 806162 CATATAACAAAAAAA CGAACAGGCTCTTTTTCTG TTATT CAGAAGA-GAACTTGTTCG TTTTTATCTTGATTT spr0804 807036 - 806221 - | hypothetical protein TERM 989 807048 - 807028 - G 72 -3.3 -5.10154 | overlap 807030 807033 AGCTAAAACTAAAAA TCGAATCAT AGG ATGACTCCA ATCAAGAGAGAATAG spr0805 807938 - 807033 - | hypothetical protein TERM 990 807468 - 807457 - G 75 -3 -5.1963 | CTCAAGTAAGAAAAA TCAT GCTC ATGA CAAGCCAGACGATTT TERM 991 807789 - 807759 - G 70 -2.5 -5.03747 | overlap 807761 AAAGGTCCCAAAAAA GATTCTCCCCCAA CGATT TCGAGGGAGAAAA TGATAAACCTTGTCA TERM 992 807787 - 807761 - G 89 -9.5 -4.13963 | overlap 807759 AGGTCCCAAAAAAGA TTCTCCCCCAA CGATT TCGAGGGAGAA AATGATAAACCTTGT spr0806 808280 - 808648 + | hypothetical protein spr0807 808645 - 809649 + | hypothetical protein TERM 993 811653 - 811638 - g 71 -7.6 -3.88498 | GTCCTAGATATCAAA GACCTA GTGG TAGGTC AGAAGCTAGAAGGTG tex 809733 - 811880 + | toxin expression - transcriptional accessory protein spr0809 811867 - 812316 + | hypothetical protein spr0810 812345 - 812647 + | hypothetical protein TERM 994 812715 - 812679 - T 88 -7.6 -4.99435 | gap 1, opp_overlap 812679 TGGAATAAGCAAAAA GCTTTAAATCAA-TAGT CTAA ACTGCTTGATTTAAAGC TTTTTTACTTTTATA TERM 995 812679 - 812715 + T 100 -9.8 -5.50313 | gap 1, opp_overlap 812679 TGGAATAAGCAAAAA GCTTTAAATCAA-TAGT CTAA ACTGCTTGATTTAAAGC TTTTTTACTTTTATA TERM 996 812763 - 812775 + T 74 -9.1 -2.96695 | opp_overlap 812754 812761 812762, overlap 812761 TGCAAACTAGGAAGC CAGCC ACA GGCTG TAATTTAGTCGGCAA spr0811 813192 - 813001 - | hypothetical protein ABC-NBD 813563 - 814378 + | ABC transporter ATP-binding protein ABC-MSD 814380 - 816368 + | ABC transporter membrane-spanning permease - unknown substrate TERM 997 816401 - 816374 - T 93 -7.8 -5.58209 | opp_overlap 816376, overlap 816376 CCAAATGTAAAAAAA GATACCTCGACT TCAA AATCGAGGTATT TCTTGTTTTCTAAAT TERM 998 816399 - 816376 - T 100 -10.4 -4.41528 | opp_overlap 816376, overlap 816374 AAATGTAAAAAAAGA TACCTCGACT TCAA AATCGAGGTA TTTCTTGTTTTCTAA TERM 999 816376 - 816399 + T 86 -8.2 -4.72617 | opp_overlap 816374 816376 AAATGTAAAAAAAGA TACCTCGACT TCAA AATCGAGGTA TTTCTTGTTTTCTAA spr0814 817001 - 816411 - | hypothetical protein TERM 1000 816665 - 816653 - G 75 -7.7 -3.99898 | opp_overlap 816663 CAACGAAGCTAGAAA TGGCA GCG TGCCA AGGATTGGTAAATTC IS1239-truncation 818001 - 817081 - | degenerate transposase TERM 1001 818412 - 818429 + H 73 -8.5 -3.29973 | TTTTATAAGTTGATG TTAGGAC ACTT GTCCTAA TTCATAAATTTTTAG TERM 1002 818574 - 818593 + H 100 -12.2 -5.1675 | opp_overlap 818570 818567 CGTCAGAAGATTGCA GAGCAGGT GAAA ACCTGCTC TTTTTTCATGAGTCA cad 818663 - 820138 + | lysine decarboxylase transposase_F 820340 - 820104 - | degenerate transposase transposase_F 820819 - 820292 - | degenerate transposase TERM 1003 821819 - 821791 - g 85 -8.9 -4.17608 | overlap 821794 TGCATCGAAAAAATA CCACCCTGTCAAA GAT TTTGACAAGGAAG GCTGGAAAAAACGCC TERM 1004 821816 - 821794 - g 82 -11.4 -3.09579 | overlap 821791 ATCGAAAAAATACCA CCCTGTCAAA GAT TTTGACAAGG AAGGCTGGAAAAAAC speE 821075 - 821935 + | spermidine synthase spr0820 821932 - 823191 + | hypothetical protein nspC 823191 - 824318 + | carboxynorspermidine decarboxylase TERM 1005 824725 - 824739 + G 75 -10 -3.03443 | CAGTCGTTTTGCTGA GGCCTT GGA AAGGCC TGTCTATGATGCTAA spr0822 824315 - 825400 + | agmatine deiminase but 825410 - 826285 + | Beta-alanine synthase or beta-ureidopropionase TERM 1006 826423 - 826461 + T 89 -7 -5.26918 | gap 1, opp_overlap 826428, overlap 826428 TTTAAAATATTAGCA AAAAAGCAAATAG-CAG TAACTT CTGTCTATTTGCTTTTC TTTTTTATAGAATAT TERM 1007 826428 - 826456 + T 93 -6.9 -5.49579 | gap 1, opp_overlap 826428, overlap 826423 AATATTAGCAAAAAA GCAAATAG-CAG TAACTT CTGTCTATTTGC TTTTCTTTTTTATAG TERM 1008 826456 - 826428 - T 89 -6.9 -5.2112 | gap 1, opp_overlap 826428 826423 AATATTAGCAAAAAA GCAAATAG-CAG TAACTT CTGTCTATTTGC TTTTCTTTTTTATAG spr0824 827275 - 826466 - | Cof family protein spr0825 827547 - 827768 + | hypothetical protein spr0826 827822 - 828493 + | hypothetical protein TERM 1009 828502 - 828529 + TF 88 -7.8 -5.02074 | opp_overlap 828507, overlap 828507 AAGTTAGCTTACTAA AAAAATGTCGGA ATTT TCCGGCATTTTC TTTTTTCACAAATAG TERM 1010 828524 - 828507 - Tf 84 -5.5 -5.52986 | opp_overlap 828502 828507 AGCTTACTAAAAAAA TGTCGGA ATTT TCCGGCA TTTTCTTTTTTCACA TERM 1011 828507 - 828524 + TF 93 -7.7 -5.42198 | opp_overlap 828507, overlap 828502 AGCTTACTAAAAAAA TGTCGGA ATTT TCCGGCA TTTTCTTTTTTCACA spr0827 828742 - 828545 - | hypothetical protein TERM 1012 828571 - 828585 + gF 70 -3.5 -4.83715 | opp_overlap 828571 CTTTCCGATACTGAA GTGGT GTGTA GCCAC TTATTTTTTTGAATT TERM 1013 828655 - 828667 + gF 81 -2.7 -5.54079 | GAAGATAGTTAAGAA GAATA GGA TGTTC TTTTTTCCTTTTTGG cpsY 828735 - 829643 + | regulatory function on capsule expression in group B streptococci lspA 829640 - 830101 + | Signal peptidase type II; lipoprotein signal peptidase rluD 830091 - 830978 + | ribosomal large subunit pseudouridine synthase D lytD 830981 - 832864 + | choline binding protein E TERM 1014 832872 - 832889 + F 70 -4.1 -4.80882 | opp_overlap 832872 AACAGTAGTAGAAAA GAAGGTT TTAG GGCCTTC TTTTTCCTATCAACT proB 832944 - 834074 + | gamma-glutamyl kinase proA 834084 - 835346 + | gamma-glutamyl phosphate reductase TERM 1015 835857 - 835871 + G 76 -7.1 -4.21994 | GCGACAGGTCTTGCA GGCTG TGGAC CAGCC TTTGTCTATCTCTTT proC 835350 - 836147 + | pyrroline-5-carboxylate reductase TERM 1016 836148 - 836167 + F 71 -5.7 -4.4767 | opp_overlap 836148 GAACTAGGTAAATAA GAGGTAG CTTTGA CTGCCTC TTTTATGGTGGCTGA tdk 836263 - 836901 + | thymidylate kinase holB 836898 - 837788 + | DNA polymerase III subunit delta' spr0837 837801 - 838145 + | DNA replication intiation control protein YabA spr0838 838148 - 839017 + | hypothetical protein TERM 1017 839393 - 839415 + G 76 -9.2 -3.67597 | overlap 839394 839404 AGAAAACCTTGCTTA TCAGGTTGGT TGG ACCAACTTGG TTCTTAAATGGGAAG TERM 1018 839394 - 839414 + G 73 -10.5 -2.80344 | overlap 839393 839404 GAAAACCTTGCTTAT CAGGTTGGT TGG ACCAACTTG GTTCTTAAATGGGAA spr0839 839217 - 839762 + | hypothetical protein TERM 1019 839808 - 839831 + F 79 -4.6 -5.27938 | opp_overlap 839808 AAAATGGTTACCAAA GGCGATAG AAGAAAAA CTATCGTC TTTTTCTTTGCAAAT TERM 1020 840260 - 840245 - g 83 -6.2 -5.10933 | overlap 840248 TCAGGTAAAAGAAAA TGACTT ACAG AAGTCA AAAAACTTAACTTCA TERM 1021 840306 - 840266 - g 91 -7.7 -5.20154 | overlap 840248 ACAGAAGTCAAAAAA CTTAACTTCAGAAGTAAAA GAT TTTAACCTCAGAAGTAAAG AAAATGAACTTCAAG spr0840 839871 - 840518 + | hypothetical protein IS1381 840896 - 840507 - | tranposase (orf2) TERM 1022 840565 - 840607 + g 70 -3.6 -4.98531 | opp_overlap 840542, overlap 840552 840542 840539 840588 840591 ATTCGTAATCCGAAG CGTTTACGATGATTTTGATA GGT TGTTGAAAACATTTTAAACG TTTTTACTTTGGCAA IS1381 841311 - 840922 - | tranposase (orf1) spr0843 841288 - 841560 + | hypothetical protein TERM 1023 841623 - 841642 + FH 91 -5 -5.89921 | opp_overlap 841623 841621 GAAAATGACTAAACA GGGAAG TTTGCCTT CTTCCC TTTTTTTGTTATACT TERM 1024 841707 - 841697 - fH 80 -6.8 -4.65895 | opp_overlap 841697 TGTGGGAGTGAAAAA GTCC TGT GGAC TTTTTCAGCCTGAGC TERM 1025 841697 - 841707 + FH 76 -6.8 -4.59773 | opp_overlap 841697 TGTGGGAGTGAAAAA GTCC TGT GGAC TTTTTCAGCCTGAGC gidA 841805 - 843139 + | tRNA (uracil-5-)-methyltransferase Gid pyrH 843217 - 843960 + | uridylate kinase frr 843969 - 844526 + | ribosome recycling factor TERM 1026 844542 - 844564 + F 84 -8.4 -4.63218 | AAATAAACAGAAAAA CTCAGTTGGC ATT GCTGGCTGAG TTTTATTCGAAAGAA spr0847 844547 - 845440 + | hypothetical protein spr0848 845449 - 845664 + | hypothetical protein TERM 1027 845789 - 845804 + G 70 -3.3 -4.87291 | opp_overlap 845781, overlap 845781 CAACTGAGTCATCCA GATGA CCTGTT TCATC TTTTTGGTTCCAATG TERM 1028 846066 - 846054 - g 71 -4.9 -4.48713 | TTTACGAAGAAGAAA TTATC AAA GATAA TACTGGGAAACCTAT phoL 845750 - 846718 + | PhoH family protein spr0850 846911 - 847411 + | hypothetical protein spr0851 847414 - 847641 + | hypothetical protein TERM 1029 847831 - 847805 - T 83 -5.9 -5.03994 | gap 1, opp_overlap 847804 847805 TTTTATATATAAAAA GAAGCTGGGACT AAAG AG-CTCAGCTTC CTTTGGTTTATATAA ald-truncation 848316 - 848041 - | alanine dehydrogenase, truncation ald-truncation 848576 - 848313 - | alanine dehydrogenase, truncation ald-truncation 849152 - 848727 - | alanine dehydrogenase, truncation TERM 1030 849252 - 849220 - H 79 -5.6 -5.04601 | TTCATAAATCAAAAA TGTGACGGTTTCAT TGTAT ATGAAACCGCTTCA AAAATCAAGAAAAAC spr0855 849329 - 849898 + | hypothetical protein TERM 1031 849900 - 849924 + F 95 -8.7 -5.54885 | opp_overlap 849900 849899 TTGCAAATAAATAAG CAGTTGAAAAG AAA TTTTTCGACTG TTTTTTCTTCCTCTT celA 849966 - 850616 + | competence protein CelA TERM 1032 851325 - 851345 + G 86 -7.6 -5.1675 | TATCCACCTCTTTGC CCTATCTG GCATG CAGGTAGG TTTTTTCATGAATGG TERM 1033 851684 - 851698 + G 80 -10 -3.64318 | GTCTAGTCATCTCCT TGGGCA TAT TGCCCA TTCTATCCTTCTATT celB 850600 - 852840 + | competence protein CelB spr0858 853019 - 853207 + | hypothetical protein spr0859 853218 - 853715 + | ABC transporter ATP-binding protein TERM 1034 854115 - 854099 - g 82 -3.7 -5.42862 | opp_overlap 854114, overlap 854114 AGACGTGCAAAAAAA TCTTTTG ACG CGAAAGA CAGAAATTCTGACTT TERM 1035 854769 - 854800 + G 72 -9.6 -3.03159 | gap 1 CTCATTGGGATTGTT GGCTTA-TTGTTTGG CAT CCAAACAATTCAGCC TCTTCAAAGGATTGC spr0860 853830 - 855011 + | hypothetical protein TERM 1036 855077 - 855043 - f 73 -7.2 -3.98991 | opp_overlap 855049, overlap 855048 CTAAAGAAAAACTAA CATAGGGAGAGAATCA ACT TGATTCTCTCTTTTTG ATTCGAAAACCAAAC TERM 1037 855072 - 855048 - f 75 -10.1 -2.5719 | opp_overlap 855049, overlap 855043 GAAAAACTAACATAG GGAGAGAATCA ACT TGATTCTCTCT TTTTGATTCGAAAAC TERM 1038 855049 - 855071 + F 100 -13.6 -4.8622 | opp_overlap 855048 855043 AAAAACTAACATAGG GAGAGAATCA ACT TGATTCTCTC TTTTTGATTCGAAAA TERM 1039 855249 - 855237 - f 74 -6.3 -4.2828 | CCCTACGGATGAAAA GTTTC GAA GAAAC GCTATCATAACGTGC TERM 1040 855262 - 855290 + G 79 -6.8 -4.59846 | gap 1, overlap 855263 AACGCTATCATAACG T-GCGGGCTTGTA TATT TACGAGTCCGCTA TTGTTTTTCTCTAAT TERM 1041 855263 - 855288 + G 91 -11.9 -3.89226 | overlap 855262 ACGCTATCATAACGT GCGGGCTTGTA TATT TACGAGTCCGC TATTGTTTTTCTCTA infC 855261 - 855848 + | translation initiation factor IF-3 rpmI 855881 - 856081 + | 50S ribosomal protein L35 rplT 856133 - 856492 + | 50S ribosomal protein L20 TERM 1042 856503 - 856525 + G 81 -7.1 -4.59773 | gap 1, opp_overlap 856505 AATAACAACTGATGA GACTGGAACA GGAT TGT-CCAGTC TTTTTAAAAATAAAG TERM 1043 856607 - 856623 + G 75 -5.9 -4.67038 | CTTGAAAAATCAATC GCATTTT ATC AAGATGC TTTTGGTTTTAAAGA lguL 856499 - 856930 + | lactoylglutathione lyase TERM 1044 856941 - 856970 + F 93 -7.3 -5.47218 | opp_overlap 856946 AATAATTTCGTGCAA GTTAAGTAGAATA TTCG TTTTCTACTTGAC TTTTTTTAGCTGAAA TERM 1045 857118 - 857137 + F 100 -10 -5.06016 | opp_overlap 857118 TACGATTTTAACTGA GGCCTTGC ACTA GCAAGGTC TTTTCTTTATCTGGT pyrDII 857180 - 857980 + | dihydroorotate dehydrogenase electron transfer subunit pyrD 857991 - 858929 + | dihydroorotate dehydrogenase 1B TERM 1046 859053 - 859063 + G 81 -5.4 -5.11063 | TAAGATTTATTTTTT TAGC TCT GCTA TTTTTCTTAGCTAGT lytB 858971 - 861136 + | endo-beta-N-acetylglucosaminidase TERM 1047 861202 - 861179 - T 93 -9 -4.76892 | opp_overlap 861179 ATAGTAAGTTAAAAA TCCTGATTTC AAGT AAAATCAGGA TTTTTTCATGGATGC TERM 1048 861179 - 861202 + T 90 -8.3 -5.1675 | opp_overlap 861179 ATAGTAAGTTAAAAA TCCTGATTT CAAGTA AAATCAGGA TTTTTTCATGGATGC flpA 862879 - 861197 - | adherence and virulence protein A TERM 1049 861553 - 861568 + g 76 -3.3 -5.24449 | TTTTGCCATCGCTTG CTAGA TATTGT TCTAG TTTTTTGCGTTTCTG TERM 1050 862150 - 862164 + g 74 -6.4 -4.3255 | opp_overlap 862129, overlap 862149 862151 TGAAGGAAGTCTCAG TCAAGC ATG GCTTGG TTTCTTGATTGAAAA spr0869 862957 - 863454 + | putative metalloprotease TERM 1051 863802 - 863817 + G 72 -4.7 -4.67697 | GCGCATTGATTTTTC TCCCA CGAATC TGGGA TTTATTATTTTAAAC dgkA 863435 - 863830 + | diacylglycerol kinase era 863847 - 864746 + | GTP-binding protein Era TERM 1052 864750 - 864771 + F 89 -8.7 -4.40561 | opp_overlap 864750, overlap 864747 AGAGAATACTAAGTA GAGGTAGGC TCAT GCCTGCTTC TTGTTTTTACAGAAG TERM 1053 865579 - 865589 + GF 76 -6.8 -4.38154 | TTCAACTAGGCGGAC GTGG AAC CCAC TTTTGTCCAAACTGT mutM 864795 - 865619 + | formamidopyrimidine-DNA glycosylase spr0874 866308 - 866108 - | hypothetical protein coaE 865592 - 866224 + | dephospho-CoA kinase pmrA 866211 - 867410 + | major facilitator superfamily multi-drug resistance efflux pump rpmG 867410 - 867559 + | 50S ribosomal protein L33 secG 867599 - 867832 + | preprotein translocase subunit SecG TERM 1054 868155 - 868166 + GF 72 -4.4 -4.73108 | GGGGATTTTTCATGC CCAT AAAA ATGG TTTTGGTTTTGTCAG TERM 1055 868797 - 868807 + GF 73 -5.4 -4.55093 | GGAGCTTGGGGTTCA CATC GCA GATG TTTCTTATTATGTGA rnr 867934 - 870288 + | exoribonuclease R smpB 870251 - 870718 + | SsrA-binding protein tehB 870728 - 871594 + | tellurite resistance protein TehB TERM 1056 871606 - 871625 + F 100 -7.2 -6.04324 | opp_overlap 871606, overlap 871600 GTAAACACACATGAA GATTAGGA ATTT TCCTGATC TTTTTTCTTTTTTAC coiA 871667 - 872620 + | competence protein CoiA pepB 872639 - 874441 + | oligoendopeptidase F spr0883 874443 - 875156 + | O-methyltransferase TERM 1057 875427 - 875415 - g 74 -4.9 -4.68994 | ATGACCATCCAAAAA GTTTT TGA AAAAC AATATGGCTCAGAGC TERM 1058 875974 - 875958 - g 78 -3.7 -5.34632 | AAGAAAACAGAAAAA TCATCTA ATA TTGATGA CTACAAAGAAAAATT prsA 875223 - 876164 + | foldase protein PrsA TERM 1059 876291 - 876323 + T 80 -6.4 -4.76874 | opp_overlap 876294, overlap 876292 AATTAATTTATCCGA AGATTTAGTTCTGT ATTGC ACAGAGCTAAGTCC TTTTAGTTTTATCTT TERM 1060 876292 - 876322 + T 81 -9.9 -3.43684 | opp_overlap 876294, overlap 876291 ATTAATTTATCCGAA GATTTAGTTCTGT ATTGC ACAGAGCTAAGTC CTTTTAGTTTTATCT IS861-truncation 876623 - 876381 - | degenerate transposase (orf2) IS861-truncation 876820 - 876623 - | degenerate transposase (orf1) TERM 1061 876763 - 876809 + g 83 -11.8 -3.26471 | opp_overlap 876766, overlap 876766 876768 876803 TTAATTTCATAATAA AAACACCCCAAAAGTTAGAT TTTTTCT GTCTAACTTTTGGGGTGTAG TTCATGTACACCTGA TERM 1062 876766 - 876806 + g 100 -17.9 -2.81547 | opp_overlap 876766, overlap 876763 876768 876803 ATTTCATAATAAAAA CACCCCAAAAGTTAGAT TTTTTCT GTCTAACTTTTGGGGTG TAGTTCATGTACACC TERM 1063 876806 - 876766 - G 100 -17.2 -5.19328 | opp_overlap 876766 876763 876768 876803 ATTTCATAATAAAAA CACCCCAAAAGTTAGA TTTTTTCTG TCTAACTTTTGGGGTG TAGTTCATGTACACC TERM 1064 876768 - 876804 + g 100 -14.7 -2.95521 | opp_overlap 876766, overlap 876766 876763 876803 TTCATAATAAAAACA CCCCAAAAGTTAGAT TTTTTCT GTCTAACTTTTGGGG TGTAGTTCATGTACA TERM 1065 877280 - 877301 + r 76 -6.7 -4.60255 | gap 1, opp_overlap 877280 877300, overlap 877300 TGTTCATATCAAAAA GGTATTGGCA AGT TGC-AATACC TTTTTACAAGGTTCT TERM 1066 877301 - 877280 - R 80 -6.7 -4.8048 | gap 1, opp_overlap 877280 877300, overlap 877300 TGTTCATATCAAAAA GGTATTGGCA AGT TGC-AATACC TTTTTACAAGGTTCT gpmB 878003 - 877383 - | phosphoglycerate mutase family protein ebsC 878485 - 878003 - | regulatory protein, putative spr0889 879327 - 878485 - | hypothetical protein spr0890 880222 - 879422 - | hypothetical protein gcaD 880306 - 881745 + | UDP-N-acetylglucosamine pyrophosphorylase TERM 1067 882018 - 882006 - g 82 -7.7 -4.51097 | overlap 882008 GGAAGTAGGAGAAAA CACAG CCC CTGTG GCAGCTGCCCTTCGT spr0892 881755 - 882300 + | hypothetical protein spr0893 882279 - 882626 + | hypothetical protein pfs 882643 - 883335 + | 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase TERM 1068 883816 - 883790 - g 86 -10.3 -4.00445 | overlap 883813 GATCAGCAACAACAA TTGACCCTTCA AGCCA TGAAGGATCAA GAAAATCTTAAGCTA spr0895 883412 - 883903 + | hypothetical protein dnaQ 883965 - 884591 + | DNA polymerase III subunit epsilon TERM 1069 885370 - 885386 + G 83 -9.5 -3.89411 | opp_overlap 885369, overlap 885367 885377 GGTAGATGATATCAC TCAGAGA GAG TCTCTGA TTCTTGGTATTTTGA spr0897 884594 - 886363 + | hypothetical protein TERM 1070 886391 - 886374 - f 100 -9.9 -5.5112 | TTTAGTAATAAAAAA GAGGAAC GGTT GTTCCTC CCATGATAGGTAAGT TERM 1071 886401 - 886424 + F 85 -6.8 -5.37345 | TTCCTCCCATGATAG GTAAGTATTC TTGT GAATGCTTGC TTTTTTGTGGTTGCA transposase_A 886559 - 886924 + | degenerative transposase transposase_B 887083 - 887223 + | degenerate transposase spr0901 888035 - 887403 - | hypothetical protein spr0900 887384 - 887584 + | hypothetical protein TERM 1072 887979 - 887964 - Gg 70 -3.2 -5.00196 | CGTGAAAGAAGAAAA TGGCTC AGCA GAGACA GAAACTAAACTAGTA spr0902 887626 - 888030 + | hypothetical protein TERM 1073 888080 - 888106 + FH 83 -7.3 -4.80396 | TTTTCGTTCACAAAA GCAGCGATGAG TAATC CTTGTCGTTGC TTTTTGGCTATTTTG TERM 1074 888791 - 888801 + G 70 -8.2 -3.71527 | TCTCATTTACACTCT GGGC ATG GCCC TTCCTTTCTTGGTCT ccdA 888261 - 888968 + | cytochrome c-type biogenesis protein spr0904 888961 - 889536 + | hypothetical protein TERM 1075 889570 - 889548 - f 82 -7.8 -4.49337 | opp_overlap 889548, overlap 889543 CTAGAATCGATAAAA TCTGATTACA AGA TGTAGTCAGA TTTTGGTAACTTCTA TERM 1076 889548 - 889570 + F 100 -10 -4.32049 | opp_overlap 889543 889548 CTAGAATCGATAAAA TCTGATTACA AGA TGTAGTCAGA TTTTGGTAACTTCTA TERM 1077 889642 - 889676 + F 87 -6.4 -5.42605 | opp_overlap 889645, overlap 889643 GAAAAACGCGTGACA TCAGTGGAAATCCGTC TTA GACTAACTTCCACTGG TTTTCTTTTTCTTGA TERM 1078 889643 - 889675 + F 73 -7.7 -3.83123 | opp_overlap 889645, overlap 889642 AAAAACGCGTGACAT CAGTGGAAATCCGTC TTA GACTAACTTCCACTG GTTTTCTTTTTCTTG TERM 1079 891146 - 891164 + G 74 -6 -4.43844 | opp_overlap 891141 891146 GAATTTAAAACACCA TTGGTACC TCT GTTACCAA TTTTATCGATCATCA yfnA 889898 - 891301 + | cationic amino acid transporter lmb 891426 - 892361 + | adhesion lipoprotein phtD 892369 - 894930 + | pneumococcal histidine triad protein D precursor TERM 1080 894956 - 894982 + F 100 -9.6 -5.00616 | opp_overlap 894961 GGAGCATATTTTATG GAGAAGTAAC CTTTCGT GTTACTTCTC TTTTTTAGAAAAACG TERM 1081 895042 - 895069 + F 77 -8.6 -3.55815 | opp_overlap 895028 895055 895063, overlap 895023 ATAGTAAACTATTTA CTGGTTAATTAA ATGG TTAAATAACCAG TTTAGAAAACTATTT TERM 1082 895162 - 895182 + G 72 -10.5 -2.7044 | opp_overlap 895160 895162 895165, overlap 895165 TCAGTAAAAAATATA TAGCAGCTG GAT CAGCTGTTA TCGTATCCTTGAGTC TERM 1083 895182 - 895162 - g 73 -8.3 -3.69447 | opp_overlap 895162 895165, overlap 895160 895165 TCAGTAAAAAATATA TAGCAGCTG GAT CAGCTGTTA TCGTATCCTTGAGTC TERM 1084 895165 - 895179 + G 79 -10 -3.49858 | opp_overlap 895162 895160 895165, overlap 895162 GTAAAAAATATATAG CAGCTG GAT CAGCTG TTATCGTATCCTTGA TERM 1085 895179 - 895165 - g 72 -10 -2.62912 | opp_overlap 895165 895162, overlap 895162 895160 GTAAAAAATATATAG CAGCTG GAT CAGCTG TTATCGTATCCTTGA TERM 1086 897685 - 897675 - g 71 -4 -4.93318 | GAGAAGGTAGAAAAA GAAA AAC TTTC TGAAACTGGGAATAG phtE 895140 - 898259 + | pneumococcal histidine triad protein E precursor TERM 1087 898292 - 898342 + F 95 -8.7 -4.93661 | gap 1, opp_overlap 898292 AGTCTGAATCAAAAA TGAAGTTCTCTCAAAAGTTAGA AATAAAAC TCTGACTT-TGGGAGAATTTCA TTTTATTATTAATAT TERM 1088 898406 - 898425 + F 71 -5.2 -4.54253 | opp_overlap 898406, overlap 898415 TGGAATATTTACTAA TTAATTAA CTGG TTAATTAA TTTATTTAATCATTT TERM 1089 899148 - 899173 + G 72 -9.9 -2.97029 | gap 1, opp_overlap 899147 899152 899155, overlap 899147 899150 899165 TCTATTTCAATCTAC GATAGT-ACCAC ATG GTGGTCACTATC ATTTCATTCCTGAGA spr0909 899089 - 899229 + | hypothetical protein phtE-truncation 899263 - 899811 + | pneumococcal histidine triad protein E precursor, truncation spr0911 900088 - 899873 - | hypothetical protein TERM 1090 900172 - 900154 - gR 73 -7.4 -3.88985 | opp_overlap 900157, overlap 900157 AAAAGCTGCCACAAA CAAGGCTG ATG CAGACTTG GATGAAGTAAACAGT spr0912 900059 - 900688 + | hypothetical protein TERM 1091 900724 - 900692 - TR 100 -9.9 -5.22006 | opp_overlap 900696, overlap 900696 900698 CCAGTAGAATAAAAA GAAAGGCGAAGTAGC TGA GCTACCTCGTCTTTT TAGCTTTTATAAGCT TERM 1092 900696 - 900720 + Tr 100 -10.7 -4.89729 | opp_overlap 900696 900692 900698 TAGAATAAAAAGAAA GGCGAAGTAGC TGA GCTACCTCGTC TTTTTAGCTTTTATA TERM 1093 900720 - 900696 - TR 100 -10.7 -5.09221 | opp_overlap 900696, overlap 900692 900698 TAGAATAAAAAGAAA GGCGAAGTAGC TGA GCTACCTCGTC TTTTTAGCTTTTATA TERM 1094 900718 - 900698 - TR 84 -11.9 -2.75415 | opp_overlap 900696, overlap 900696 900692 GAATAAAAAGAAAGG CGAAGTAGC TGA GCTACCTCG TCTTTTTAGCTTTTA pepT 901951 - 900731 - | peptidase T TERM 1095 902215 - 902189 - g 70 -9.4 -2.70946 | overlap 902188 902186 TTTTTTCACAAATAT TCGTCGTGGGGT GAG ACCCCAAGACCA CGAGATTCAGACTCT TERM 1096 903179 - 903166 - g 90 -5.3 -5.52986 | ATCTTATCAAAAAAA TGCTT GAAA AAGCA GGCAAGTTACCCAAA hemH 902106 - 903200 + | ferrochelatase TERM 1097 903231 - 903209 - T 89 -6.3 -5.69793 | opp_overlap 903209 AGAGTAAAGAAAAAA GGATTTAGC TTTGC GCTAGATCC TTTTAATCGATTATT TERM 1098 903209 - 903231 + T 89 -8.5 -4.32651 | opp_overlap 903209 AGAGTAAAGAAAAAA GGATTTAGC TTTGC GCTAGATCC TTTTAATCGATTATT mscL 903619 - 903242 - | large conductance mechanosensitive channel protein MscL TERM 1099 903283 - 903295 + g 88 -4.1 -5.75945 | TTTCTTGAAGGACTT CCAAT TCG GTTGG TTTTTTTTCGGCAGT mesH 904132 - 903701 - | GtrA family protein ccl 904183 - 904764 + | hypothetical protein TERM 1100 904775 - 904795 + F 86 -8.3 -4.8048 | opp_overlap 904775 AATAGAAGAAGATAA GCTAGGTAG TTC TTACCTGGC TTTTTCCTATGGAAA TERM 1101 904797 - 904811 + F 70 -7.2 -3.86194 | AGTTCTTACCTGGCT TTTTCC TAT GGAAAA TTTCTAAGGAAACTT TERM 1102 904954 - 904969 + F 89 -3.2 -5.89921 | ATATGTATAGGGAAA CTCTTG AATA CGGGAG TTTTTTTGTTATACT TERM 1103 905148 - 905174 + F 87 -6.6 -5.45802 | overlap 905156 TCACATGAAGATGCC TCTTAGTCCCTA GTC TAGCGACTGGGA TTTTTATTTTCCAAA TERM 1104 905156 - 905173 + F 73 -7.7 -3.86397 | overlap 905148 AGATGCCTCTTAGTC CCTAGTC TAGC GACTGGG ATTTTTATTTTCCAA TERM 1105 906072 - 906062 - g 70 -3.2 -4.92385 | TATATCGAAACAAAA GAAG TGG CTCC AATCGAAGAAGTAAA asd 905279 - 906355 + | aspartate-semialdehyde dehydrogenase TERM 1106 906368 - 906385 + F 87 -9.9 -3.9392 | TAGTCATATCGTTTA GGAGTTC AGAT GAACTCC TTCTTTGAAATAGAG TERM 1107 906772 - 906759 - g 76 -6.7 -4.35483 | CCTTACTACAACAAA CCTTC TCAA GAAGG AATGTATCAGCATTT dapA 906411 - 907346 + | dihydrodipicolinate synthase TERM 1108 907386 - 907361 - T 77 -5.5 -4.96657 | opp_overlap 907361 907374, overlap 907356 ATAAAGACAATAAAA TCCATGACC GAATGAAG GATCATGGA TTTTTCTTATTTTCC TERM 1109 907361 - 907386 + T 82 -4.1 -5.4593 | gap 1, opp_overlap 907361 907356, overlap 907374 ATAAAGACAATAAAA TCCATGA-CC GAATGAA GGATCATGGA TTTTTCTTATTTTCC trmE 908766 - 907393 - | tRNA modification GTPase TrmE TERM 1110 908795 - 908811 + r 80 -6.6 -4.68655 | overlap 908792 ATTAATAGCTCTTTT CTTGGA AATTC TCCAAG TTTCTTTTCAAATTG TERM 1111 908898 - 908877 - R 100 -9.5 -4.70659 | opp_overlap 908877 908894 TTGGAGATTGAAAAA GCCTAAGCA ATTC TGCTTAAGC TAGCTTATTTAGTAC xylH 909085 - 908903 - | 4-oxalocrotonate tautomerase tdk 909208 - 909807 + | thymidine kinase bltD 909797 - 910276 + | spermine/spermidine acetyltransferase prfA 910286 - 911365 + | peptide chain release factor 1 TERM 1112 911453 - 911478 + GF 77 -4.8 -4.87389 | CTTTTGTCTATCGTA GTCTGAAAAA TCTATC TTTTACAGAC TTTATTTTTGCCCTC TERM 1113 911772 - 911757 - gf 70 -2.6 -5.14563 | gap 1, overlap 911759 CGCTCTAGCAAAAAA TAGACCA GAT TGGTC-A GTGACAGCAGCAGAT TERM 1114 911771 - 911759 - gf 78 -7.7 -4.20707 | overlap 911757 CTCTAGCAAAAAATA GACCA GAT TGGTC AGTGACAGCAGCAGA TERM 1115 912166 - 912154 - gf 73 -7.7 -3.76373 | GTTCGAACACTCAAA GACCA ATT TGGTC AAAATAGGATGGTTG hemK 911365 - 912204 + | HemK protein spr0926 912179 - 912790 + | hypothetical protein spr0927 912753 - 913223 + | hypothetical protein glyA 913285 - 914541 + | serine hydroxymethyltransferase TERM 1116 914702 - 914725 + G 79 -9.7 -3.70511 | opp_overlap 914698, overlap 914709 GATGAAGCCAAGACT GGGATTTTC GAAGAA GAAAATCCC TTCTTCAATCATATT TERM 1117 914814 - 914831 + G 74 -4.1 -5.17507 | GCATTTCTGAAAATC TCAAGAC CAAT GACTTGA TTTTTGTTCAATTTT spr0929 914516 - 915523 + | hypothetical protein TERM 1118 915509 - 915499 - f 70 -4 -4.87291 | TATCTTAATCAAAAA TATC GAG GATA TCCAAAGTAAATAAT spr0930 915523 - 916137 + | hypothetical protein TERM 1119 916127 - 916145 + F 85 -6.7 -5.21236 | TCACTCTCTTTTCAA CATCTGG CTAGA CCAGGTG TTTTTGTTATAAGTT spr0931 916211 - 917185 + | hypothetical protein TERM 1120 917205 - 917228 + F 82 -5.3 -5.24129 | TTTCATGGTATAATG GATGGTAAC CGTAAC GTTGCCGTC TTTTTTGTCGGCCAA TERM 1121 918021 - 918033 + G 73 -7.7 -3.96327 | GCGATTTTTGGTAAG GAGTG GCG CACTC TTTATGGTCAAGACT TERM 1122 918306 - 918293 - g 90 -3.1 -5.94597 | GAATAGTAAAAAAAA TGCTC AGCT GAACA ATATTTCAAACGCCC spr0932 917259 - 918890 + | hypothetical protein TERM 1123 919008 - 919018 + F 73 -4 -5.19879 | opp_overlap 919008 GCTCAATATAAAGAT TGAT AGG ATCA TTTTTATATTTAAAG TERM 1124 919344 - 919286 - f 73 -3.69999 -5.08015 | gap 4, opp_overlap 919289 919307, overlap 919288 919289 AACTCAAAAAATAAA TAGTTGGTGTGCTGCTTACAATATCCATT TTAAT AATGGATATTGTAAGCAGCATAC---C-A ATGAATTTAAAGATT TERM 1125 919346 - 919288 - f 100 -25.1 -4.13692 | opp_overlap 919289 919307, overlap 919286 919289 CTCAAAAAATAAATA GTTGGTGTGCTGCTTACAATATCCATT TTAAT AATGGATATTGTAAGCAGCATACCAAT GAATTTAAAGATTCT TERM 1126 919345 - 919289 - f 100 -28.6 -3.06588 | opp_overlap 919289 919307, overlap 919286 919288 TCAAAAAATAAATAG TTGGTGTGCTGCTTACAATATCCATT TTAAT AATGGATATTGTAAGCAGCATACCAA TGAATTTAAAGATTC TERM 1127 919289 - 919345 + F 100 -30.8 -2.65279 | opp_overlap 919286 919288 919289, overlap 919307 TCAAAAAATAAATAG TTGGTGTGCTGCTTACAATATCCATT TTAAT AATGGATATTGTAAGCAGCATACCAA TGAATTTAAAGATTC TERM 1128 919407 - 919434 + F 82 -5.7 -5.31275 | AATATGTAAATCTCA GACGATAGA AATTAAAAAC TCTATCGTC TTTTTTATACTCAAA spr0933 919628 - 919846 + | hypothetical protein ABC-SBP 920239 - 921264 + | iron-compound ABC transporter, iron compound-binding protein TERM 1129 921314 - 921269 - g 81 -2.8 -5.64421 | gap 1, opp_overlap 921275 921277, overlap 921273 921277 ATGCGAAATAAAAAA CAAATAAACCTAGGCATAATT TTTGT AATC-TGCCTAGGTCTTCTTA TTACAATATTTTTGT TERM 1130 921310 - 921273 - g 76 -3.6 -5.26158 | gap 1, opp_overlap 921275 921277, overlap 921269 921277 GAAATAAAAAACAAA TAAACCTAGGCATAATT TTTGT AATC-TGCCTAGGTCTT CTTATTACAATATTT TERM 1131 921306 - 921277 - g 84 -6.6 -5.00234 | gap 1, opp_overlap 921277 921275, overlap 921273 921269 TAAAAAACAAATAAA CCTAGGCATAATT TTTGT AATC-TGCCTAGG TCTTCTTATTACAAT TERM 1132 921966 - 921992 + G 84 -8 -4.67608 | opp_overlap 921966 921968 921969 921971, overlap 921969 ATGTTAATAGGATAA GATCACTTGCAA TAA TTGCAAGTGTGC TTTTATGTTCAAGTA TERM 1133 921990 - 921968 - g 72 -9.2 -3.33348 | opp_overlap 921966 921969, overlap 921966 921969 921971 GTTAATAGGATAAGA TCACTTGCAA TAA TTGCAAGTGT GCTTTTATGTTCAAG TERM 1134 921969 - 921989 + G 85 -12.7 -3.26141 | opp_overlap 921968 921966 921969 921971, overlap 921966 TTAATAGGATAAGAT CACTTGCAA TAA TTGCAAGTG TGCTTTTATGTTCAA TERM 1135 921989 - 921969 - g 83 -12.7 -2.59527 | opp_overlap 921969 921966, overlap 921968 921966 921971 TTAATAGGATAAGAT CACTTGCAA TAA TTGCAAGTG TGCTTTTATGTTCAA TERM 1136 921987 - 921971 - g 71 -9.5 -2.82988 | opp_overlap 921969 921966, overlap 921969 921968 921966 AATAGGATAAGATCA CTTGCAA TAA TTGCAAG TGTGCTTTTATGTTC ABC-MSP 921242 - 922261 + | iron-compound ABC transporter, permease protein TERM 1137 922633 - 922623 - gT 71 -4 -4.91852 | GGTATTAAAAACAAA TAGT TTA ACTA CTGGAATTATTTCAA spr0937 923156 - 922743 - | hypothetical protein TERM 1138 922974 - 922990 + Gg 77 -5.1 -4.86862 | opp_overlap 922955 ACTTGGAGCAAATCC CGAGCTT TCA AGGCTTG TTTTAATTTTTTGCG ABC-MSP 922261 - 923268 + | iron-compound ABC transporter, permease protein ABC-NBD 923268 - 924062 + | iron-compound ABC transporter, ATP-binding protein spr0939 924630 - 924839 + | hypothetical protein spr0940 924964 - 925119 + | hypothetical protein TERM 1139 925271 - 925311 + F 100 -11.3 -4.96848 | opp_overlap 925270 GACAGTTACCAAGAG GGTCTAATTTTCACTGC TACTTAT GCAGTGGGAATTTGACC TTTTTATATAAGCAA spr0941 925803 - 925964 + | hypothetical protein TERM 1140 926090 - 926077 - g 85 -3.9 -5.58051 | AAAGAAAAAATAAAA GTATA CCTC TATAC ACGAGTATCTACGTC ccrB 926056 - 927735 + | low similarity to site-specific recombinase spr0943 927958 - 928569 + | hypothetical protein spr0944 928882 - 929079 + | hypothetical protein TERM 1141 929077 - 929096 + F 73 -3.6 -5.055 | opp_overlap 929077 ATTTACTCAAAAAAA TAAGAGCA AAAT TGCTATTA TTTTTTACAAATTGG TERM 1142 929096 - 929077 - f 79 -3.6 -5.47821 | opp_overlap 929077 ATTTACTCAAAAAAA TAAGAGCA AAAT TGCTATTA TTTTTTACAAATTGG spr0945 929141 - 929956 + | hypothetical protein TERM 1143 930038 - 930012 - g 70 -9.6 -2.66329 | opp_overlap 930017, overlap 930011 930017 CGAATGGAACAATAT CAAAACAAAGGA CTT TCCTTTATTTCG GAAGGACTGCTTTTT TERM 1144 930033 - 930017 - g 73 -5.9 -4.49937 | opp_overlap 930017, overlap 930012 930011 GGAACAATATCAAAA CAAAGGA CTT TCCTTTA TTTCGGAAGGACTGC spr0946 929956 - 930810 + | hydrolase, putative TERM 1145 931063 - 931048 - g 75 -5.4 -4.7329 | opp_overlap 931048 AAAATTACCGAAAAA GTGCTG GATG CAACAC ATTTTGCTGAAGAAG spr0947 930871 - 931806 + | hypothetical protein TERM 1146 931809 - 931842 + F 72 -9.1 -2.73619 | opp_overlap 931819, overlap 931811 931819 GAAAGAGGATTAGTA TATAGAGAAAGCCTT TTTT AAGGCTTTTTGTATA CTTTAAAAGATAGTT TERM 1147 931832 - 931819 - f 71 -6.7 -4.18367 | opp_overlap 931811 931809 931819 TAGTATATAGAGAAA GCCTT TTTT AAGGC TTTTTGTATACTTTA TERM 1148 931819 - 931832 + F 84 -6.7 -5.06585 | opp_overlap 931819, overlap 931811 931809 TAGTATATAGAGAAA GCCTT TTTT AAGGC TTTTTGTATACTTTA nplT 931945 - 933708 + | neopullulanase spr0949 933794 - 934111 + | hypothetical protein spr0950 934157 - 934438 + | hypothetical protein TERM 1149 934810 - 934839 + F 89 -7.9 -5.34555 | opp_overlap 934813, overlap 934811 934813 934816 GGATAGAAACACAAG AAATAACGCACCA TTTT TGGTGCGTTATGC TTTTTTATGCTATAA TERM 1150 934811 - 934838 + F 90 -11.4 -3.79649 | opp_overlap 934813, overlap 934810 934813 934816 GATAGAAACACAAGA AATAACGCACCA TTTT TGGTGCGTTATG CTTTTTTATGCTATA TERM 1151 934836 - 934813 - f 100 -14 -4.54553 | opp_overlap 934813 934811 934810 934816 TAGAAACACAAGAAA TAACGCACCA TTTT TGGTGCGTTA TGCTTTTTTATGCTA TERM 1152 934813 - 934836 + F 100 -14 -3.46407 | opp_overlap 934813, overlap 934811 934810 934816 TAGAAACACAAGAAA TAACGCACCA TTTT TGGTGCGTTA TGCTTTTTTATGCTA TERM 1153 934816 - 934833 + F 90 -11.3 -3.83985 | opp_overlap 934813, overlap 934813 934811 934810 AAACACAAGAAATAA CGCACCA TTTT TGGTGCG TTATGCTTTTTTATG spr0951 934826 - 935359 + | transcriptional regulator spr0952 935359 - 936120 + | hypothetical protein TERM 1154 936323 - 936333 + GF 70 -2.6 -5.03314 | opp_overlap 936323 936332 TTACTGAAGATGAAC TATA TGA TATA TTTTTTGAAAATAAG spr0953 936148 - 936924 + | hypothetical protein spr0954 936852 - 937304 + | hypothetical protein TERM 1155 937316 - 937337 + F 88 -5.9 -5.72622 | opp_overlap 937316 GTAGAGTCAGAAAAA GTAGGTTAG AAAT TTAGCCTAC TTTTTTCTTTGTCCG TERM 1156 937949 - 937999 + F 100 -9.3 -4.67556 | gap 1, overlap 937942 937952 GGAGCCACTAAGTTA TCTTATCGTTAG-CTGTCAAAACT GGTA GGTTTTGATAGGCTGGCGATATGA TTTTTGGGATATTGT TERM 1157 937952 - 937996 + F 79 -9.6 -3.25567 | gap 1, overlap 937942 937949 GCCACTAAGTTATCT TATCGTTAG-CTGTCAAAACT GGTA GGTTTTGATAGGCTGGCGATA TGATTTTTGGGATAT TERM 1158 938111 - 938072 - f 87 -12.4 -3.14564 | gap 1, opp_overlap 938071 938084, overlap 938084 TGAGGTCTTTAGGAA TCGTACTGACAATGTGAGG CAG CCTTACATTGTCAG-ACAA GTATAATGTTGAAAG spr0955 938136 - 938495 + | Tn5252, ORF 10 protein spr0956 938505 - 938834 + | Tn5252, ORF 9 protein relaxase-truncation 938857 - 939474 + | Tn5252, relaxase, truncation relaxase-truncation 939505 - 940062 + | Tn5252, relaxase, truncation TERM 1159 940488 - 940465 - g 93 -7.4 -5.52096 | overlap 940466 AAACCCAAGAAAAAA TCGCCACCTT AAAC AAGATGGCGG AAGTCCTTATCAATT TERM 1160 940487 - 940466 - g 86 -10.9 -3.88817 | overlap 940465 AACCCAAGAAAAAAT CGCCACCTT AAAC AAGATGGCG GAAGTCCTTATCAAT spr0959 940146 - 940742 + | hypothetical protein mutR 941641 - 940787 - | putative positive transcriptional regulator MutR TERM 1161 941228 - 941262 + g 80 -11.6 -2.75074 | opp_overlap 941226 941228 941229, overlap 941225 AATTTTGAAAAGATA GTCTGTCAGATGAAGA AGC TCTTCATCTGATGGAA TGATGTTCGAATCCA TERM 1162 941261 - 941229 - G 76 -10.7 -2.63891 | opp_overlap 941228 941225, overlap 941228 941226 ATTTTGAAAAGATAG TCTGTCAGATGAAGA AGC TCTTCATCTGATGGA ATGATGTTCGAATCC TERM 1163 941798 - 941815 + H 75 -8.5 -3.40558 | opp_overlap 941797 941798, overlap 941797 941812 TTGGTGGATAAAATG CTTAGGT GTAC ACCTAAG TCTTTAGAGTATCTA rffD 941893 - 943188 + | UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase TERM 1164 943215 - 943199 - gf 78 -3.7 -5.24449 | GATAAAGTGAAAAAA GCATTAA TAA TTACTGC CCATCCAGATGATGC spr0962 943148 - 943798 + | hypothetical protein spr0963 943808 - 944590 + | hypothetical protein TERM 1165 944636 - 944622 - g 80 -4.3 -5.27399 | TAAGATATGAAAAAA TGTTG GCTTA CAACA AACTTTGAAGACTAT TERM 1166 945340 - 945316 - g 73 -8.7 -3.67141 | opp_overlap 945319 945323, overlap 945317 945323 945326 ATAATGTGATGGAAA CGAGAAATATC AAT GATATTCCTCA TTGGGCTAAAAATCC TERM 1167 945339 - 945317 - g 73 -10 -2.79803 | opp_overlap 945319 945323, overlap 945316 945323 945326 TAATGTGATGGAAAC GAGAAATATC AAT GATATTCCTC ATTGGGCTAAAAATC spr0964 944613 - 946505 + | hypothetical protein TERM 1168 946634 - 946648 + G 95 -8.6 -5.47218 | AGAATGTTGTGATTT GCTTTG GTG CAAAGC TTTTTTTCAATGAAG spr0965 946534 - 947640 + | hypothetical protein TERM 1169 947986 - 947998 + G 83 -3.4 -5.52986 | AAGAGAGATTTCGGA CACT CCTTT AGTG TTTTTTTCATCAGGT spr0966 947648 - 948958 + | hypothetical protein TERM 1170 949934 - 949891 - g 82 -10.6 -3.59698 | opp_overlap 949893, overlap 949892 949895 CTATTTTAGATAGAA TTCATATTTCACAAAAACCT AAAA AAGTTTTTGTGAAATATGTT GGTGGAGAGAATTTC TERM 1171 949933 - 949892 - g 93 -14.1 -2.75498 | opp_overlap 949893, overlap 949891 949895 TATTTTAGATAGAAT TCATATTTCACAAAAACCT AAAA AAGTTTTTGTGAAATATGT TGGTGGAGAGAATTT TERM 1172 949893 - 949932 + G 100 -15.4 -3.14463 | opp_overlap 949892 949891 949895 ATTTTAGATAGAATT CATATTTCACAAAAACCT AAAA AAGTTTTTGTGAAATATG TTGGTGGAGAGAATT TERM 1173 949930 - 949895 - g 93 -14.4 -2.64877 | opp_overlap 949893, overlap 949892 949891 TTTAGATAGAATTCA TATTTCACAAAAACCT AAAA AAGTTTTTGTGAAATA TGTTGGTGGAGAGAA spr0967 948960 - 950183 + | hypothetical protein TERM 1174 950876 - 950886 + G 70 -2.6 -5.01845 | CAGTTCATATGGGAA TAAT TTT ATTA TTTTTAGTTATTATG spr0968 950173 - 951123 + | hypothetical protein TERM 1175 951913 - 951923 + G 78 -4 -5.28778 | ATCATACAATTCCTT TTCA TGC TGAA TTTTTTGTAGATGGT nikS 951138 - 952337 + | nikkomycin biosynthesis protein, carboxylase spr0970 952356 - 953000 + | hypothetical protein TERM 1176 953322 - 953340 + F 71 -7.6 -3.65046 | opp_overlap 953322 AGATGAGGATCATAA TCATTTTT TGA AAAAATGA TTATTACGATAAAAG TERM 1177 953710 - 953723 + G 70 -3.1 -4.83615 | ACTAATATTATCTTG GCATT TATG AGTGC TTTTTCTGGACCGTC mefE 953383 - 954594 + | ABC transporter membrane-spanning permease - macrolide efflux TERM 1178 955089 - 955112 + F 81 -7.5 -4.34759 | CTTATAACATTTTTA GACGGTTAA TAGATT TTGACCGTC TTTCTTAATATTGTC TERM 1179 955178 - 955206 + F 73 -9 -3.17639 | opp_overlap 955185, overlap 955175 ATAAATTAATTTTAG TTCAAAATGTCC AGTTA GGACACTTTGAA TGATTTCTTAGTTTT spr0972 955253 - 955474 + | hypothetical protein TERM 1180 955467 - 955517 + F 100 -16.6 -4.14764 | opp_overlap 955472, overlap 955472 ATAAAATTCGCTTTA GAAAATAATCTCCTCAATTTCATA GAG TGTGAAAATGAGGAGATTATTTTA TTTGGTTCTTTGACA TERM 1181 955512 - 955472 - f 100 -14.3 -4.37092 | opp_overlap 955467 955472 ATTCGCTTTAGAAAA TAATCTCCTCAATTTCATA GAG TGTGAAAATGAGGAGATTA TTTTATTTGGTTCTT TERM 1182 955472 - 955512 + F 100 -16.5 -5.03713 | opp_overlap 955472, overlap 955467 ATTCGCTTTAGAAAA TAATCTCCTCAATTTCATA GAG TGTGAAAATGAGGAGATTA TTTTATTTGGTTCTT TERM 1183 955811 - 955781 - f 81 -9.8 -3.44289 | opp_overlap 955790, overlap 955782 955790 GAGAAACGCAATTAA TCCTCAAAAGGTTC CCC GAACCTTTTGAGTT CCACAGACGCATCAC TERM 1184 955810 - 955782 - f 87 -13.3 -2.6585 | opp_overlap 955790, overlap 955781 955790 AGAAACGCAATTAAT CCTCAAAAGGTTC CCC GAACCTTTTGAGT TCCACAGACGCATCA TERM 1185 955790 - 955802 + F 81 -7.7 -4.27316 | opp_overlap 955782 955781 955790 AATTAATCCTCAAAA GGTTC CCC GAACC TTTTGAGTTCCACAG TERM 1186 955802 - 955790 - f 78 -7.7 -4.15508 | opp_overlap 955790, overlap 955782 955781 AATTAATCCTCAAAA GGTTC CCC GAACC TTTTGAGTTCCACAG ftsW 956376 - 957605 + | cell division protein FtsW, putative ppc 957625 - 960321 + | phosphoenolpyruvate carboxylase TERM 1187 960614 - 960640 + F 100 -14.6 -5.52384 | TACCGCGCATCGACG TCCTCACACAAG TTT TTTGTGTGAGGA TTTTTTTGATGGAGG ABC-SBP 960704 - 961738 + | hypothetical protein TERM 1188 961746 - 961767 + F 83 -6.5 -5.0133 | opp_overlap 961747, overlap 961747 TCGAATAAATAAGGT AGGGAGGAG GAGA CTCTTCCCA TTTTTTAAAAAGATG TERM 1189 961747 - 961766 + F 82 -10 -3.60316 | opp_overlap 961747, overlap 961746 CGAATAAATAAGGTA GGGAGGAG GAGA CTCTTCCC ATTTTTTAAAAAGAT TERM 1190 962051 - 962041 - g 79 -6.8 -4.52589 | CTTCTTTATACAAAA GGGA AGA TCCC AACCTTGCTCTCAGG ABC-MSP 961807 - 962673 + | ABC transporter membrane-spanning permease - unknown substrate ABC-NBD 962670 - 963428 + | ABC transporter ATP-binding protein TERM 1191 963566 - 963553 - g 79 -5.3 -5.09521 | TGAAGAAATCAAAAA CAATG CCAA CATTG TGGAAGTCATAGGAG TERM 1192 964220 - 964207 - g 74 -4.5 -4.98255 | opp_overlap 964207 TTCTAAGTATAAAAA CAGCC GATC GACTG TAATTTTTAACAAAA dnaG 963503 - 965278 + | DNA primase rpoD 965281 - 966390 + | RNA polymerase sigma factor RpoD spr0980 966371 - 966733 + | hypothetical protein TERM 1193 966802 - 966748 - f 75 -10.1 -2.54448 | gap 1, opp_overlap 966749 966750, overlap 966747 966767 AACATATAAAAGCAT GTGAGAGACTGTTGGAAAAGTGAGGA AATT TCCCCTCTTTTCCTCTAGTCTCTC-C TTTCTTTTGCTGATT TERM 1194 966749 - 966802 + F 100 -10.3 -4.74518 | opp_overlap 966748 966747 966767, overlap 966750 ACATATAAAAGCATG TGAGAGACTGTTGGAAAAGTGAGGA AATT TCCCCTCTTTTCCTCTAGTCTCTCC TTTCTTTTGCTGATT TERM 1195 966750 - 966801 + F 95 -13.8 -3.43084 | opp_overlap 966748 966747 966767, overlap 966749 CATATAAAAGCATGT GAGAGACTGTTGGAAAAGTGAGGA AATT TCCCCTCTTTTCCTCTAGTCTCTC CTTTCTTTTGCTGAT cpoA 966767 - 967891 + | glycosyl transferase CpoA spr0982 967907 - 969232 + | glycosyl transferase, group 1 spr0983 969263 - 969439 + | hypothetical protein TERM 1196 969654 - 969673 + F 71 -3.4 -5.0538 | opp_overlap 969653, overlap 969655 TTCAAGAAAATTTAG TGACTGGG ATTT CCCAGCCC TTTTTTAAAGTGAGA obgE 969702 - 971006 + | GTPase ObgE spr0985 971016 - 971174 + | hypothetical protein TERM 1197 971235 - 971257 + T 100 -13.6 -5.27779 | opp_overlap 971239 GTCAGCTAAGCTCGA GAAAGGACAA ATT TTGTCCTTTC TTTTTTGATATTCAG TERM 1198 971253 - 971239 - T 79 -8.6 -3.89614 | opp_overlap 971235 GCTAAGCTCGAGAAA GGACAA ATT TTGTCC TTTCTTTTTTGATAT IS1167-truncation 971728 - 971225 - | degenerate transposase (orf2) TERM 1199 971600 - 971619 + g 70 -9.4 -2.64981 | opp_overlap 971598 971596 971595, overlap 971596 CATACGAAAAGTAGG GCGATAAA AACG TTTATCGC TCAATTTACGACTAT IS1167-truncation 972018 - 971764 - | degenerate transposase (orf2) TERM 1200 971808 - 971794 - G 73 -8.6 -3.6502 | opp_overlap 971794 CATTCGGGAGTGAAA CAGTCT GGG AGACTG TTTCAGCCTGAGCCT TERM 1201 971794 - 971808 + g 72 -8.6 -3.57263 | opp_overlap 971794 CATTCGGGAGTGAAA CAGTCT GGG AGACTG TTTCAGCCTGAGCCT IS1167 972563 - 972009 - | transposase TERM 1202 972652 - 972599 - H 100 -17.1 -4.96848 | opp_overlap 972611, overlap 972601 TTTTCTACACAAAAA TAGGCTCCATAATATCTATAGTGGA TTTA CCCACTACAAATATTATAGAGCCAA AAATCCCGTGCCACA TERM 1203 972650 - 972601 - H 100 -19.7 -4.11141 | opp_overlap 972611, overlap 972599 TTCTACACAAAAATA GGCTCCATAATATCTATAGTGGA TTTA CCCACTACAAATATTATAGAGCC AAAAATCCCGTGCCA TERM 1204 972656 - 972679 + H 71 -5.3 -4.46212 | opp_overlap 972656 TTATAGAGCCAAAAA TCCCGTG CCACATCAAA CACGGGA TTTTGTGGTACGACG TERM 1205 972679 - 972656 - H 80 -6.7 -4.72846 | opp_overlap 972656 TTATAGAGCCAAAAA TCCCGTGCC ACATCA AACACGGGA TTTTGTGGTACGACG TERM 1206 972990 - 973007 + H 78 -7.7 -4.2349 | opp_overlap 972990 GGTAGTGGATTAAAA CGGTCTG GGGA TAGACCG TTTTAAGTCTGACGC TERM 1207 973007 - 972990 - H 75 -7 -4.26903 | opp_overlap 972990 GGTAGTGGATTAAAA CGGTCT GGGGAT AGACCG TTTTAAGTCTGACGC TERM 1208 973612 - 973594 - H 78 -10.4 -2.61383 | overlap 973593 AGTTCCATCTACAAC CTCAAAAC AGT GTTTTGAG CAACCTGCGGCTAGT murZ 973796 - 975055 + | UDP-N-acetylglucosamine 1-carboxyvinyltransferase spr0990 975065 - 975622 + | hypothetical protein spr0991 975615 - 976892 + | hypothetical protein map 976908 - 977768 + | methionine aminopeptidase IS1381-truncation 977840 - 978547 + | degenerate transposase (orf1) TERM 1209 978893 - 978851 - g 85 -7.2 -4.98531 | overlap 978845 978885 TTGCCAAAGTAAAAA CGTTTAAAATGTTTTCAACA ACC TATCGAAATCATCGTAAACG CTTCGGATTACGAAT IS1381 978562 - 978951 + | tranposase (orf2) TERM 1210 980172 - 980184 + G 71 -6.3 -4.23007 | opp_overlap 980171 GTCGCAGTCAAAACT TCCTT CAT AAGGA TTTTGCAGTTCTCTA pcrA 979142 - 981433 + | ATP-dependent DNA helicase PcrA TERM 1211 981441 - 981470 + F 81 -5.8 -4.9792 | AAATCTAATTTTCCA TCCTTCTCAC GAATAATAAA GTGAGGAGGA TTTTTATGTACAGTA TERM 1212 981853 - 981842 - g 73 -2.2 -5.26316 | overlap 981845 TTAGGGGATAAAAAA CAAG AGCA CCTG GTGGCACTCTATCTC TERM 1213 981862 - 981845 - g 75 -5.5 -4.72201 | overlap 981842 GGGGATAAAAAACAA GAGCACC TGGT GGCACTC TATCTCAATACTCAA radC 981461 - 982156 + | DNA repair protein RadC spr0997 982842 - 982153 - | hypothetical protein TERM 1214 982775 - 982802 + g 93 -7 -5.40004 | CCTTTTGCTGCGTAG CTCATCATGATG TCAT CATCTGGATGAG TTTTTTCGTTTCCTG spr0998 983501 - 982860 - | redox-sensing transcriptional repressor Rex TERM 1215 983572 - 983587 + r 72 -6.2 -4.34402 | opp_overlap 983572 AAAAATAAGAAAAAA CTAAGA AAAA TCTTAG TTTTGATGTAAAAAA TERM 1216 983587 - 983572 - R 93 -6.2 -5.80727 | opp_overlap 983572 AAAAATAAGAAAAAA CTAAGA AAAA TCTTAG TTTTGATGTAAAAAA spr0999 983835 - 983584 - | hypothetical protein TERM 1217 983739 - 983725 - GR 73 -8.6 -3.32997 | TCCTGACAAAGTCAA CATGAG AGC CTCATG ATCCTCATACTTGAG spr1000 984154 - 983807 - | hypothetical protein nifS 985274 - 984159 - | pyridoxal-phosphate dependent aminotransferase TERM 1218 984464 - 984478 + g 73 -7.1 -4.07786 | opp_overlap 984452 GAATGCCCTCCAGCT CTGCC AGAAA GGCAG TTTCTAGATTTTGTA prs 986243 - 985284 - | ribose-phosphate pyrophosphokinase spr1003 986925 - 986356 - | hypothetical protein spr1004 987053 - 987724 + | putative GTP pyrophosphokinase ppnK 987696 - 988526 + | inorganic polyphosphate/ATP-NAD kinase rluD 988523 - 989419 + | 23S rRNA pseudouridine synthase eutD 989463 - 990437 + | phosphotransacetylase TERM 1219 990554 - 990544 - T 71 -5.4 -4.57073 | GATTGGTGTCAAAAA GGAA AAC TTCC AAGCGATGATATCCT TERM 1220 990709 - 990731 + T 100 -13.6 -5.27779 | opp_overlap 990713 AAAAGCTAAGCTCGA GAAAGGACAA ATT TTGTCCTTTC TTTTTTGATATTCAG TERM 1221 990727 - 990713 - T 79 -8.6 -3.89614 | opp_overlap 990709 GCTAAGCTCGAGAAA GGACAA ATT TTGTCC TTTCTTTTTTGATAT IS1167-truncation 991217 - 990699 - | degenerate transposase (orf2) TERM 1222 991297 - 991283 - R 77 -8.6 -3.6502 | opp_overlap 991283 CATTCGGGAGTGAAA CAGTCT GGG AGACTG TTTCAGCCTGAGCCT TERM 1223 991283 - 991297 + r 77 -8.6 -3.57263 | opp_overlap 991283 CATTCGGGAGTGAAA CAGTCT GGG AGACTG TTTCAGCCTGAGCCT IS1167 992016 - 991498 - | transposase TERM 1224 992141 - 992089 - R 93 -8.8 -4.77165 | gap 1, opp_overlap 992058 992053 992090 992091, overlap 992091 TTTTCTACAATAAAA TAGGCTCCATAATATCTATAGTGGA TTTA CCCACTACAAATATTATAGAGTC-A TTTTTGCACCTTTCT TERM 1225 992090 - 992141 + r 74 -5.3 -4.6526 | opp_overlap 992089 992091, overlap 992058 992053 992091 TTTCTACAATAAAAT AGGCTCCATAATATCTATAGTGG ATTTAC CCACTACAAATATTATAGAGTCA TTTTTGCACCTTTCT TERM 1226 992140 - 992091 - R 100 -13.9 -4.00512 | opp_overlap 992058 992053 992090 992091, overlap 992089 TTCTACAATAAAATA GGCTCCATAATATCTATAGTGGA TTTA CCCACTACAAATATTATAGAGTC ATTTTTGCACCTTTC TERM 1227 992091 - 992140 + r 75 -8.8 -3.38071 | opp_overlap 992091 992089, overlap 992058 992053 992090 TTCTACAATAAAATA GGCTCCATAATATCTATAGTGG ATTTAC CCACTACAAATATTATAGAGTC ATTTTTGCACCTTTC spr1010 992497 - 992198 - | hypothetical protein spr1011 992899 - 993603 + | hypothetical protein rplU 993785 - 994099 + | 50S ribosomal protein L21 spr1013 994115 - 994459 + | hypothetical protein rpmA 994500 - 994769 + | 50S ribosomal protein L27 TERM 1228 994773 - 994785 + TF 81 -7.7 -4.37092 | opp_overlap 994773 ATCGCAAAATAAAAA GGTTC ATT GAACC TTTTATCCCGAACCT TERM 1229 994785 - 994773 - Tf 93 -7.7 -5.46706 | opp_overlap 994773 ATCGCAAAATAAAAA GGTTC ATT GAACC TTTTATCCCGAACCT TERM 1230 994840 - 994867 + TF 100 -10.6 -6.11229 | opp_overlap 994832 994839 994842, overlap 994842 GAAACAGCTTAAAAT AAGGCTTTCCGA GTTT TCGGAGAGCCTG TTTTTTTATTTTGAT TERM 1231 994865 - 994842 - Tf 100 -11 -4.2142 | opp_overlap 994840 994842, overlap 994839 AACAGCTTAAAATAA GGCTTTCCGA GTTT TCGGAGAGCC TGTTTTTTTATTTTG TERM 1232 994842 - 994865 + TF 100 -13.2 -4.67109 | opp_overlap 994842 994839, overlap 994840 AACAGCTTAAAATAA GGCTTTCCGA GTTT TCGGAGAGCC TGTTTTTTTATTTTG spr1015 995285 - 995115 - | hypothetical protein spr1016 995261 - 995434 + | hypothetical protein TERM 1233 995762 - 995748 - g 75 -2.8 -5.252 | TATTCCTATAAAAAA CCAAAA AGA TATTGG CACACCATCTGATTC mreA 995722 - 996639 + | bifunctional riboflavin kinase/FMN adenylyltransferase TERM 1234 996710 - 996728 + T 77 -3.1 -5.51353 | opp_overlap 996669, overlap 996670 TTTAGTCTAACTTTT GAGGTCA CGACA TTACCTC TTTTTATTCTTTTTC spr1018 997580 - 996732 - | hypothetical protein TERM 1235 997647 - 997657 + H 90 -4 -5.90981 | GATTGACTCCATTAG GATT TTT AATC TTTTTTTTGATATAA spr1019 997722 - 998561 + | hypothetical protein hlpA 998667 - 998942 + | DNA-binding protein HU TERM 1236 998958 - 998992 + F 100 -9.5 -5.32944 | gap 1, opp_overlap 998958 TCAGTCTTTAAAAAG CCTATTGTATCAAGCT TTCT AGCTTGGT-CAGTAGG TTTTTTAATTATGAA TERM 1237 1000527 - 1000516 - gf 80 -7.2 -4.48221 | opp_overlap 1000516 TATCAAGGGAGAAAA GCGC TTTG GCGC TAATGTTGAGGTTGG ABC-NBD 999368 - 1001269 + | ABC transporter ATP-binding protein TERM 1238 1001384 - 1001407 + GF 70 -8.1 -3.27619 | overlap 1001383 CTCGCTTTGAGCTTG GGGAGTCTG ACCTGG CAGTCTCCC GTTTCTTTGAGATTT rggD 1001242 - 1002135 + | transcriptional regulator MutR, putative TERM 1239 1002164 - 1002208 + F 79 -8.8 -3.84825 | gap 1, opp_overlap 1002164 GGGAAAAAATAAAAA GCTCCTTTC-GGTTTTGATAC AATA GTTTCAAAATTTGAGAGGAGC TTTAATATGAATCGC TERM 1240 1002208 - 1002164 - f 78 -2.2 -5.75538 | gap 1, opp_overlap 1002164 GGGAAAAAATAAAAA GCTCCTTTC-GGTTTTGATAC AATA GTTTCAAAATTTGAGAGGAGC TTTAATATGAATCGC TERM 1241 1003065 - 1003082 + G 71 -4.1 -4.91511 | TTTTGATTTTACTGG CTTTGAC AGGT GTCGGAG TTTTTATGATGGGAT ABC-MSP 1002215 - 1003393 + | ABC transporter membrane-spanning permease - macrolide efflux TERM 1242 1003439 - 1003462 + F 100 -11 -4.35042 | overlap 1003437 CTAAGTGTTTTTTCC GCCCTTCTCG TTTG TGAGGAGGGC TTGTTTTATGGTAAA TERM 1243 1003519 - 1003539 + G 70 -9.7 -2.62263 | GAGTTAGTCGCTTTG CTCAATCGC TAT GCGACTGAG TACTATACCAGCGAT TERM 1244 1004184 - 1004198 + G 70 -5.7 -4.4767 | opp_overlap 1004184 AAAGGGTTTGAAGTA CCTAG AACAA CTAGG TTTTGTGGTCAATCC ligA 1003486 - 1005444 + | NAD-dependent DNA ligase LigA TERM 1245 1007077 - 1007087 + G 73 -5.4 -4.49556 | AATGCCTACCAGATG CCAA ATA TTGG TTTCTTTAATGACAA pulI 1005556 - 1007835 + | thermostable pullulanase TERM 1246 1007983 - 1008021 + G 100 -17.1 -5.18726 | gap 1, opp_overlap 1007983, overlap 1008019 ATTTTCACGAAACAA GACCTCCTATCAAA-GTT TTTG AACATTTGATAGGAGGTC TTTTTATTATGAAGA TERM 1247 1008021 - 1007983 - g 100 -17.1 -4.0031 | gap 1, opp_overlap 1007983 1008019 ATTTTCACGAAACAA GACCTCCTATCAAA-GTT TTTG AACATTTGATAGGAGGTC TTTTTATTATGAAGA spr1026 1007886 - 1008047 + | hypothetical protein spr1027 1008360 - 1008187 - | hypothetical protein TERM 1248 1008649 - 1008620 - g 73 -2.3 -5.32944 | gap 1 GCGATAAGGAAAAAA TTGGTACTATCCTT GCC AAAGA-AGTAGCAA AAGGGATTAAAGCAG TERM 1249 1009420 - 1009408 - g 76 -3.3 -5.20333 | GATGCACAAGAAAAA GAGGC TCA GGCTC TTACACCAATCAAAC gapN 1008379 - 1009803 + | glyceraldehyde-3-phosphate dehydrogenase, NADP-dependent TERM 1250 1009808 - 1009837 + F 100 -11.7 -5.58454 | opp_overlap 1009813 1009814 1009816, overlap 1009835 ATGTGAAATAACGTG TAAAATCAGGAAA TTGT TTTCCTGGTTTTA TTTTTTTGCTATAAA TERM 1251 1009831 - 1009814 - f 71 -8.5 -3.09429 | opp_overlap 1009808, overlap 1009813 1009816 AATAACGTGTAAAAT CAGGAAA TTGT TTTCCTG GTTTTATTTTTTTGC glgB 1010268 - 1012196 + | glycogen branching enzyme glgC 1012186 - 1013328 + | glucose-1-phosphate adenylyltransferase glgD 1013318 - 1014457 + | required for glycogen biosynthesis glgA 1014454 - 1015887 + | glycogen synthase TERM 1252 1015922 - 1015892 - f 73 -8.5 -3.19081 | opp_overlap 1015897, overlap 1015897 TAGTTAATTAATAGA TAAAATCGTATGA TGACT TCATACGATTTTT AGGCTGTTTAGAGAG TERM 1253 1015897 - 1015917 + F 86 -8.4 -4.6856 | opp_overlap 1015897 1015892 AATTAATAGATAAAA TCGTATGA TGACT TCATACGA TTTTTAGGCTGTTTA TERM 1254 1015917 - 1015897 - f 86 -8.4 -4.70453 | opp_overlap 1015897, overlap 1015892 AATTAATAGATAAAA TCGTATGA TGACT TCATACGA TTTTTAGGCTGTTTA TERM 1255 1016428 - 1016415 - g 74 -5.3 -4.74219 | AGAAAGAAACTAAAA CTTTC TAAA GAAAG AAGGGTGGCAATCGG serB-truncation 1016262 - 1016591 + | phosphoserine phosphatase, truncation TERM 1256 1017530 - 1017513 - g 82 -7.7 -4.57073 | opp_overlap 1017513 TAGGTGTTGCAAAAA GAACCCC TGTT GGAGTTC CTGTTATTGCTATTT glxK 1016588 - 1017715 + | glycerate kinase spr1035 1018158 - 1017712 - | hypothetical protein TERM 1257 1018540 - 1018520 - g 74 -4.7 -4.96848 | overlap 1018537 CTTGGTACACAAAAA GCTGTTGAC AAC GTAAACAAC ATCATTGCTGAAGCT eno 1018322 - 1019626 + | phosphopyruvate hydratase TERM 1258 1019648 - 1019624 - T 100 -11.7 -5.11033 | opp_overlap 1019629, overlap 1019629 TACAACCTTAAAAAA TAAAATAGTTC AGT GAACTATTTTA TCCCGAACCATGAAA TERM 1259 1019629 - 1019643 + T 78 -7.2 -4.36914 | opp_overlap 1019624 1019629 CCTTAAAAAATAAAA TAGTTC AGT GAACTA TTTTATCCCGAACCA TERM 1260 1019643 - 1019629 - T 93 -7.2 -5.42198 | opp_overlap 1019629, overlap 1019624 CCTTAAAAAATAAAA TAGTTC AGT GAACTA TTTTATCCCGAACCA TERM 1261 1019698 - 1019726 + T 100 -16.1 -5.19879 | opp_overlap 1019692 ATTTAACAACGTTTC TAGCCCCTCGGAT TTT ATCCGAAGGGCTA TTTTTGTATTTAGAG transposase_B 1020448 - 1020110 - | transposase TERM 1262 1020139 - 1020179 + g 72 -9.3 -3.30658 | gap 1, opp_overlap 1020139 1020149, overlap 1020149 AGCAGGATAAAAAAG CCTCGTAAAAGGTATTGC AACTTG GTAATACCTTTT-TGAGG TGCTTTTTGATATGA TERM 1263 1020149 - 1020170 + g 71 -5.2 -4.652 | opp_overlap 1020139 1020149, overlap 1020139 AAAAGCCTCGTAAAA GGTATTGC AACTTG GTAATACC TTTTTGAGGTGCTTT transposase_A 1020975 - 1020607 - | transposase TERM 1264 1020905 - 1020927 + g 72 -3.4 -5.0133 | TCTGTTATACTACCT GTTCGCTC ACAATAA GAGAGAAC TTTTTTACGAAAATC TERM 1265 1021291 - 1021306 + H 89 -6.8 -5.60689 | opp_overlap 1021291 ATCATAAAACTCAAA GCCTTG TTAC CGAGGC TTTTTTATTATGTGA TERM 1266 1021614 - 1021642 + G 74 -6 -4.47888 | gap 1, opp_overlap 1021608 TTTGAAAAGGAACGC GCCGTGCTGGAAT ACTT GTCCCAGCA-GGC TTCTTTTTCGATTAC TERM 1267 1023349 - 1023362 + G 71 -6.7 -4.03219 | TTTCCTTGGTCAATT CTGCT CGTA AGCAG TTGTTCTTGTCGGCT TERM 1268 1023374 - 1023384 + G 79 -6.8 -4.57073 | GCAGTTGTTCTTGTC GGCT CCA AGCC TTTTTAACGAAAGTG TERM 1269 1024730 - 1024710 - g 72 -4.7 -4.82901 | overlap 1024711 CTGGTCGGAGAAAAA CTCAAGCAA GCT TGGCTTGAA AAAATAAGAGAGGAG rexB 1021482 - 1024757 + | second subunit of major exonuclease TERM 1270 1024808 - 1024796 - g 74 -4.8 -4.7173 | GAGGAGATTCAAAAA CTGC AAGAA GCAG AAGCAAATTCGAGCA TERM 1271 1024849 - 1024839 - g 70 -3.2 -4.91285 | AGGAACAGAAGAAAA CTGC CGA GCAA ATCGAAGCTATCTAC TERM 1272 1025771 - 1025749 - g 73 -7 -4.24534 | overlap 1025751 CAACGAAGAGAGAAA GACCCAGTTT GCT AAACTAGGAC AATTATCAGACCAGA TERM 1273 1025769 - 1025751 - g 70 -8.2 -3.70645 | overlap 1025749 ACGAAGAGAGAAAGA CCCAGTTT GCT AAACTAGG ACAATTATCAGACCA TERM 1274 1026295 - 1026308 + G 79 -6.7 -4.59773 | opp_overlap 1026295 AATCAACTATGATAA CAAGC ACCA GCTTG TTTTTGCCAATACCA rexA 1024754 - 1028404 + | exonuclease RexA TERM 1275 1028510 - 1028492 - f 78 -10.4 -2.61383 | opp_overlap 1028491, overlap 1028491 AGTTCTATCCACAAC CTCAAAAC AGT GTTTTGAG CTGATTGCGGCTAGC TERM 1276 1028598 - 1028610 + G 75 -7.7 -4.11484 | opp_overlap 1028597 CCAGTTAGAAAATCC CTGCA CGA TGCAG TTTTACAGGCTTCGA spr1041 1028574 - 1029752 + | hypothetical protein TERM 1277 1029754 - 1029788 + F 100 -15.2 -3.28924 | opp_overlap 1029757, overlap 1029757 GATTAGTGATATGAG TAACACCTACCGTGTA AAT TTCATGGTAGGTGTTA TTGTACCCCCAAATA TERM 1278 1029785 - 1029757 - f 83 -10.3 -3.25223 | opp_overlap 1029754 1029757 TAGTGATATGAGTAA CACCTACCGTGTA AAT TTCATGGTAGGTG TTATTGTACCCCCAA TERM 1279 1029757 - 1029785 + F 95 -12.5 -3.78934 | opp_overlap 1029757, overlap 1029754 TAGTGATATGAGTAA CACCTACCGTGTA AAT TTCATGGTAGGTG TTATTGTACCCCCAA TERM 1280 1030835 - 1030821 - g 77 -8.6 -3.80604 | overlap 1030829 AGAAACGAAGAAAGA GGAGAA GAT TTCTCC AAAAGAAAAGACTGG TERM 1281 1031166 - 1031141 - g 90 -4.8 -5.54894 | overlap 1031161 AAGGTACTAAAAAAA CTCAAGTTAT AAAGGA ACAACCTGAG ACTGGTGTAGAACAT TERM 1282 1031479 - 1031465 - g 73 -2.1 -5.25803 | AAGGTCCAGAAAAAA CTGAA GAAGT TCCAG TAAAACCAACAGAAG TERM 1283 1032214 - 1032197 - g 70 -5.5 -4.40358 | overlap 1032200 1032208 AGTCAGTTTATAAAA TCACAGC CAAA GCTGAGA AACTCCAGCAAGAAC TERM 1284 1035653 - 1035637 - g 74 -6.5 -4.43221 | overlap 1035640 AAAGATCCGACAAAA CCATGGC CAA GCTATGG CACAAAGACTATCAA iga 1029961 - 1035852 + | immunoglobulin A1 protease TERM 1285 1035861 - 1035850 - f 77 -3 -5.55769 | TTTGAGAATAAAAAA TAGT GTTT ACTA TTAGGAAATAAAGTT TERM 1286 1036084 - 1036099 + F 84 -5.4 -5.4251 | opp_overlap 1036084 TGCTCCCTCTGAAAA GTCATC ATTT GATGGC TTTTTTCTATATAGG rbgA 1036311 - 1037162 + | ribosomal biogenesis GTPase TERM 1287 1037196 - 1037176 - g 73 -6.9 -4.22442 | overlap 1037169 1037173 AAAGAAATCAAAGAA CTCCTTG TGACAGT CAAGGAG TTAGAAAGCCCTATT rnhB 1037149 - 1037928 + | ribonuclease HII TERM 1288 1038695 - 1038713 + G 82 -11.8 -3.08867 | TCCTTGGATTTTCAG GCTTTCTC TAT GAGAAAGC TGTATTAAACGTTGG spr1045 1037929 - 1039494 + | voltage-gated chloride channel family protein TERM 1289 1039496 - 1039533 + F 100 -10.9 -4.27211 | overlap 1039491 1039497 ATTTGTTGTTGTAGT ATGATCATTTACATAAT TTAT GTTATGTAAATGATCAG TTTGATTTATTTAGA TERM 1290 1039497 - 1039532 + F 95 -14.4 -3.15242 | overlap 1039496 1039491 TTTGTTGTTGTAGTA TGATCATTTACATAAT TTAT GTTATGTAAATGATCA GTTTGATTTATTTAG TERM 1291 1039549 - 1039577 + F 79 -5.4 -5.1861 | gap 1, opp_overlap 1039552, overlap 1039552 TTTGATTTATTTAGA AAACCGATTCTCA GAAA TGAGA-TCGGTTA TTTTTTACTGATGAG TERM 1292 1039552 - 1039574 + F 83 -7.1 -4.68456 | gap 1, opp_overlap 1039552, overlap 1039549 GATTTATTTAGAAAA CCGATTCTCA GAAA TGAGA-TCGG TTATTTTTTACTGAT TERM 1293 1039574 - 1039552 - f 78 -7.1 -4.431 | gap 1, opp_overlap 1039549 1039552 GATTTATTTAGAAAA CCGATTCTCA GAAA TGAGA-TCGG TTATTTTTTACTGAT xerS 1040078 - 1041148 + | site-specific tyrosine recombinase XerS TERM 1294 1041189 - 1041212 + T 90 -8.2 -5.04601 | opp_overlap 1041189 TAAATATCAAAAAAA GAAGTTGGTT AGTT GGCCAACTTC TTTTTGATTTATCCA TERM 1295 1041212 - 1041189 - T 89 -6.8 -5.66989 | opp_overlap 1041189 TAAATATCAAAAAAA GAAGTTGG TTAGTTGG CCAACTTC TTTTTGATTTATCCA lplA 1042210 - 1041221 - | lipoate-protein ligase, putative TERM 1296 1042256 - 1042239 - R 71 -6.3 -4.11404 | opp_overlap 1042239 TTTATATGATAGAAA CTGGAAA TAAC CTTCCAG TCTAATCTATCTTCG acoL 1043977 - 1042274 - | dihydrolipoamide dehydrogenase acoC 1045066 - 1044023 - | dihydrolipoamide acetyltransferase acoB 1046276 - 1045284 - | acetoin dehydrogenase, E1 component, beta subunit, putative acoA 1047260 - 1046292 - | TPP-dependent acetoin dehydrogenase alpha chain TERM 1297 1047385 - 1047358 - R 100 -9.2 -5.86976 | opp_overlap 1047358 1047364 1047381 1047383, overlap 1047381 TCACAAAATAAAAAA GAAAACCCCGTG AAAA CAAGGGATTTTC TTGTCAAGAATATTT spr1052 1048775 - 1047414 - | MATE efflux family protein TERM 1298 1048390 - 1048378 - G 70 -7.7 -3.7798 | overlap 1048376 GATAAAAACCAAAGA TAGCG AAC CGCTA CTGCCGCTACTGCTG pyrC 1050328 - 1049060 - | dihydroorotase mutX 1050805 - 1050341 - | 8-oxodGTP nucleoside triphosphatase ung 1051483 - 1050815 - | uracil-DNA glycosylase TERM 1299 1051266 - 1051248 - G 70 -3.1 -4.99035 | overlap 1051249 TCAGGTACAGAAAAA CTCAAGC CCTGC GCTTGAC CTGGTCCGTGATAGG TERM 1300 1051533 - 1051503 - R 76 -9.9 -2.78463 | opp_overlap 1051510, overlap 1051510 ACTGCCTCTATTATA GCAAAAAGTGGCT ATGGA AACCACTTTTTAC AGTTTATCTAAAGAT TERM 1301 1051526 - 1051510 - R 70 -4.4 -4.82667 | opp_overlap 1051510, overlap 1051503 CTATTATAGCAAAAA GTGGCT ATGGA AACCAC TTTTTACAGTTTATC spr1056 1052251 - 1051604 - | hypothetical protein spr1057 1052978 - 1052265 - | hypothetical protein TERM 1302 1052484 - 1052470 - G 73 -10 -2.83403 | overlap 1052469 TTTTCTTTACTAAAT CCAGCA ATT TGCTGG CCAATCTTTTCATAA TERM 1303 1053350 - 1053330 - R 84 -5.4 -5.45802 | CTGTTAAAATAAAAA GGAACTGC ATAAA GCAATCCC TTTCTGATTTTGAAA spr1058 1053594 - 1053436 - | hypothetical protein spr1059 1053819 - 1053664 - | hypothetical protein TERM 1304 1053932 - 1053945 + r 70 -3.9 -4.8487 | TAACAGACTGGCCGT CAATA ATAG TATTG TTCTTTTTTTCATCA TERM 1305 1054180 - 1054152 - R 90 -4 -5.93809 | gap 1, opp_overlap 1054146 TTTTCATAAAAAAAA TGAGAACTAGAAC TCAC ATTCT-GCTCTCA TTTTTCGTTTTCCCG phpA 1056805 - 1054238 - | histidine motif-containing protein TERM 1306 1056882 - 1056937 + r 76 -3.8 -5.32565 | opp_overlap 1056888 1056897, overlap 1056887 1056888 1056897 CAAGAATTTTACATA TATACATAAT-AAAAATGAAAGCCTC TTTATC GAGACTTTCATTTTTCATTA-GTTTA TTTTTTCCTTACTTA TERM 1307 1056887 - 1056933 + r 77 -4.8 -5.12785 | gap 1, opp_overlap 1056888 1056897, overlap 1056882 1056888 1056897 ATTTTACATATATAC ATAAT-AAAAATGAAAGCCTC TTTATC GAGACTTTCATTTTTCATTAG TTTATTTTTTCCTTA TERM 1308 1056888 - 1056932 + r 73 -8.3 -3.65231 | gap 1, opp_overlap 1056888 1056897, overlap 1056887 1056882 1056897 TTTTACATATATACA TAAT-AAAAATGAAAGCCTC TTTATC GAGACTTTCATTTTTCATTA GTTTATTTTTTCCTT TERM 1309 1056932 - 1056888 - R 80 -10.5 -3.08197 | gap 1, opp_overlap 1056887 1056882 1056888 1056897, overlap 1056897 TTTTACATATATACA TAAT-AAAAATGAAAGCCTC TTTATC GAGACTTTCATTTTTCATTA GTTTATTTTTTCCTT TERM 1310 1056897 - 1056922 + r 81 -6.2 -4.95957 | opp_overlap 1056897 1056888, overlap 1056888 1056887 1056882 TATACATAATAAAAA TGAAAGCCTC TTTATC GAGACTTTCA TTTTTCATTAGTTTA TERM 1311 1056922 - 1056897 - R 90 -8.4 -5.27206 | opp_overlap 1056888 1056887 1056882 1056897, overlap 1056888 TATACATAATAAAAA TGAAAGCCTC TTTATC GAGACTTTCA TTTTTCATTAGTTTA phtA 1059416 - 1056930 - | pneumococcal histidine triad protein A precursor TERM 1312 1057582 - 1057592 + g 89 -5.4 -5.35815 | GCGTCTGGAGATGGA GGTA GGA TACC TTTTTCTTTAGTATA TERM 1313 1059603 - 1059627 + r 100 -15.1 -4.30014 | opp_overlap 1059603 AAAATATCAAAAAAA GTCCCTGTAAC TGA GTTGCAGGGAC TTTTCGATTAATCAA TERM 1314 1059627 - 1059603 - R 100 -12.9 -5.69023 | opp_overlap 1059603 AAAATATCAAAAAAA GTCCCTGTAAC TGA GTTGCAGGGAC TTTTCGATTAATCAA ptsI 1061368 - 1059635 - | phosphoenolpyruvate-protein phosphotransferase TERM 1315 1060101 - 1060126 + g 85 -7 -5.1356 | gap 1, opp_overlap 1060107 ATGTTATCCGCAACT GCAACACCTTC AGCAA GAAGGT-TTGC TTTTTCTTCATCAAA TERM 1316 1060831 - 1060841 + g 71 -4 -4.87786 | opp_overlap 1060831 TGTTGGTTACAAAAG CTTT TAC AAAG TTTTTGTCCAATTGA TERM 1317 1061206 - 1061245 + g 71 -7.2 -3.87597 | gap 1, opp_overlap 1061206, overlap 1061184 CGCGAATAACAGAAA GCTCGTCTTG-TGATGC CTGTAGA GCGGCATCAAGGCGAGC TTCTTCTGCGTTTGT ptsH 1061637 - 1061374 - | phosphocarrier protein HPr nrdH 1061970 - 1062206 + | glutaredoxin-like protein involved in electron transport system for ribonucleotide reductase system NrdEF nrdE 1062287 - 1064446 + | ribonucleotide-diphosphate reductase subunit alpha TERM 1318 1064446 - 1064462 + F 70 -8.1 -3.26042 | overlap 1064445 AAGCTGTGTGATTTA GTTTCTA GCA TAGAAAC ATTATTTTTCCCTAA TERM 1319 1064550 - 1064537 - f 81 -8.1 -4.1964 | opp_overlap 1064537 TGTAACATTTTAAAA GTCGG GCTT CCGAC TTTTTGTGCGATACT TERM 1320 1064537 - 1064550 + F 90 -8.1 -4.86001 | opp_overlap 1064537 TGTAACATTTTAAAA GTCGG GCTT CCGAC TTTTTGTGCGATACT nrdF 1064634 - 1065596 + | ribonucleotide-diphosphate reductase subunit beta TERM 1321 1065690 - 1065661 - f 71 -3.1 -5.14645 | gap 1, opp_overlap 1065661, overlap 1065669 ATAACCCAACAAAAA TATCGAAAGTTT TGAAAAC AAAC-TTCGATA TTTTTGTTTTTGTTT TERM 1322 1065661 - 1065690 + F 89 -3.1 -5.77734 | gap 1, opp_overlap 1065661 1065669 ATAACCCAACAAAAA TATCGAAAGTTT TGAAAAC AAAC-TTCGATA TTTTTGTTTTTGTTT lacR 1065778 - 1066539 + | lactose phosphotransferase system repressor TERM 1323 1066608 - 1066643 + T 100 -22.2 -5.43487 | opp_overlap 1066608 TTCCCACAATAAAAA GCATAGTATCAGGTGT TTCA ACACCTGATACTATGC TTTTTTCTATGATTT TERM 1324 1066643 - 1066608 - T 100 -22.2 -5.18726 | opp_overlap 1066608 TTCCCACAATAAAAA GCATAGTATCAGGTGT TTCA ACACCTGATACTATGC TTTTTTCTATGATTT lacG 1068443 - 1067037 - | 6-phospho-beta-galactosidase lacE 1070343 - 1068652 - | PTS system, lactose-specific IIBC component lacF 1070660 - 1070343 - | PTS system, lactose-specific IIA component lacT 1071532 - 1070696 - | transcription antiterminator LacT TERM 1325 1070919 - 1070930 + g 70 -3 -5.01676 | opp_overlap 1070919 TGAATCATAAAGCGA TCAT AGAA ATGA TTATTTTTTTTGGTT TERM 1326 1071626 - 1071576 - R 100 -12.3 -5.32882 | gap 1 TATGAGTACAAAAAA TGACCACAAATGAACTAGAAAATC AGCT GATTT-CTAATTCACCTGTGATCA TGCCTAATATTACTT lacD 1072746 - 1071766 - | tagatose 1,6-diphosphate aldolase lacC 1073677 - 1072748 - | tagatose-6-phosphate kinase lacB 1074203 - 1073688 - | galactose-6-phosphate isomerase subunit LacB lacA 1074659 - 1074234 - | galactose-6-phosphate isomerase subunit LacA TERM 1327 1074566 - 1074582 + g 87 -6.5 -5.35224 | opp_overlap 1074568, overlap 1074568 GACCTTCAGCTGTAA CATCCAC AAG GTGGAAG TTTTCTTTTTCTAAG lacX-truncation 1075161 - 1074817 - | hypothetical protein IS1381-truncation 1075728 - 1075330 - | degenerate transposase (orf2) TERM 1328 1075388 - 1075430 + gr 88 -7.2 -4.98531 | overlap 1075375 1075414 ATTCGTAATCCGAAG CGTTTACGATGATTTCGATA GGT TGTTGAAAACATTTTAAACG TTTTTACTTTGGCAA IS1381-truncation 1076180 - 1075659 - | degenerate transposase (orf1) spr1080 1076442 - 1076140 - | hypothetical protein TERM 1329 1076423 - 1076411 - GR 74 -9.1 -3.09327 | TGACTTGAGTTAACA CCTGC ACC GCAGG CAGCAAGAATGTTAA spr1081 1076752 - 1076480 - | hypothetical protein TERM 1330 1076515 - 1076529 + g 74 -5 -4.76644 | TATAAGCATAAAGTT TTTCTG GTT CGGAAA TTTTTGATAGGTCTT TERM 1331 1077177 - 1077195 + r 78 -10.4 -2.61383 | overlap 1077176 GCTAGCCGCAGGTTA CTCAAAAC ACA GTTTTGAG GTTGTAGATGAAACT TERM 1332 1077221 - 1077209 - R 73 -7.7 -3.83205 | AGGTTGTAGATGAAA CTGAC GAA GTCAG TAACCATACATACAG TERM 1333 1077311 - 1077293 - R 82 -4.5 -5.56112 | ATAAAAACTAAAAAA GCAGACC ATCTA AGCCTGC TTTACTATTGATTCT lepA 1079192 - 1077369 - | GTP-binding protein LepA pphA 1079999 - 1079271 - | serine/threonine protein phosphatase TERM 1334 1079502 - 1079522 + g 80 -4.7 -5.35459 | overlap 1079497 1079505 ATTTTCAGCTCCGTG GAATGGTTT TCT AAGCCATAC TTTTTTATAATCTGT recN 1081668 - 1080001 - | DNA repair protein RecN ahrC 1082106 - 1081675 - | arginine metabolism transcriptional regulator spr1086 1082914 - 1082099 - | hypothetical protein TERM 1335 1082147 - 1082174 + g 87 -5 -5.42198 | gap 1, overlap 1082148 TACTGCTTCTTTAAT CTCAGCAAG-AAT CTG ATTGCTTGCTGAC TTTTCTTTTTTCAAA TERM 1336 1082148 - 1082173 + g 77 -8.5 -3.83692 | gap 1, overlap 1082147 ACTGCTTCTTTAATC TCAGCAAG-AAT CTG ATTGCTTGCTGA CTTTTCTTTTTTCAA ispA 1083782 - 1082907 - | geranyltranstransferase xseB 1083991 - 1083779 - | exodeoxyribonuclease VII small subunit TERM 1337 1083815 - 1083830 + g 76 -7.6 -4.1585 | TCCGTCTTCTTGCAT GACCTT GACC AAGGTC TTTTCAGCCTTGTCC TERM 1338 1083921 - 1083945 + g 80 -10.1 -3.70068 | TCCAGAGCAATTTCA CCATTTTCCAA ACT TTGGACAATGG TTTCCAGTTCTGCTA xseA 1085315 - 1083969 - | exodeoxyribonuclease VII large subunit TERM 1339 1085229 - 1085249 + g 71 -7.5 -3.95621 | opp_overlap 1085229 1085227 TTGACCAGTTAAATA GACCCGTTC CAA GTATGGGTC TTTATCGAATTTCAT TERM 1340 1085428 - 1085414 - R 100 -11.4 -5.36364 | GGAAAAATAGAAAAA GGAGGC AAG GCCTCC ACATGTGATTATTTG udK 1086075 - 1085437 - | uridine kinase TERM 1341 1086172 - 1086151 - R 84 -6.6 -5.1861 | CTCATCAGCAAAAAA CACCAGAG TCTTCC CTCTGATG TTCGACAGTTTTAAC spr1091 1086485 - 1086183 - | hypothetical protein truB 1087604 - 1086726 - | tRNA pseudouridine synthase B TERM 1342 1087562 - 1087550 - G 73 -5.5 -4.62783 | overlap 1087551 TACGCAGTTTAAAAA CCGCA TCA TGCGA GGTCATTCCTGCTTC spr1093 1090890 - 1087705 - | hypothetical protein TERM 1343 1090270 - 1090286 + g 84 -8.1 -4.69664 | ATTTTCAAAATTTTC CCTATTT TTT AAATAGG TTTTTGAATAATCTG spr1094 1092176 - 1090902 - | hypothetical protein TERM 1344 1092255 - 1092236 - R 95 -8.6 -5.10154 | opp_overlap 1092236 AGGGAAAATCAAAAA CAGTGAGT CAAA ACCCACTG TTTATCTTCTTTTAC TERM 1345 1092236 - 1092255 + r 74 -6.4 -4.45253 | opp_overlap 1092236 AGGGAAAATCAAAAA CAGTGAGT CAAA ACCCACTG TTTATCTTCTTTTAC metY-truncation 1093387 - 1092272 - | O-acetylhomoserine sulfhydrylase, truncation TERM 1346 1092860 - 1092842 - G 71 -6 -4.15222 | overlap 1092846 ACTCTCGTCAACAAA TTGAGGGA ATT TCCCTGAA GCCGTCCAGTCAAAA metY-truncation 1093531 - 1093409 - | O-acetylhomoserine sulfhydrylase, truncation TERM 1347 1093670 - 1093654 - R 95 -8.7 -5.46698 | opp_overlap 1093654 1093652 TTGAAAATGAAAAAA GCACGAC TCA ATCGTGC TCATTTTCTTAATCT TERM 1348 1093654 - 1093670 + r 70 -8 -3.28327 | opp_overlap 1093654, overlap 1093652 TTGAAAATGAAAAAA GCACGA CTCAA TCGTGC TCATTTTCTTAATCT nirC 1094476 - 1093679 - | formate/nitrate transporter TERM 1349 1093930 - 1093918 - G 70 -7.7 -3.75824 | TAGCTGACAACACAA GCCAA AGT TTGGC ACCACCATCTTTGAC TERM 1350 1094168 - 1094178 + g 100 -5.4 -5.75342 | AATCTCAGCTGTTTT TCTC CAA GAGA TTTTTTTTAAGAAAC TERM 1351 1094713 - 1094689 - R 100 -14.5 -5.15117 | opp_overlap 1094689 GAAAATCTTAAAAAA TCAGTGAAATC CAT GATTTCACTGA TTTGTATTAATAAAA TERM 1352 1094689 - 1094713 + r 100 -14.5 -4.23674 | opp_overlap 1094689 GAAAATCTTAAAAAA TCAGTGAAATC CAT GATTTCACTGA TTTGTATTAATAAAA srtA 1095463 - 1094720 - | sortase gyrA 1097931 - 1095463 - | DNA gyrase subunit A ldh 1098125 - 1099111 + | L-lactate dehydrogenase TERM 1353 1099149 - 1099124 - T 80 -10.5 -3.01984 | opp_overlap 1099124, overlap 1099127 TAATTTAACTATAGA CAACTCCTTGA ATCA TCAGGGAGTTG TTTTTTATCTATATG TERM 1354 1099124 - 1099149 + T 100 -12.7 -5.4492 | opp_overlap 1099124 1099127 TAATTTAACTATAGA CAACTCCTTGA ATCA TCAGGGAGTTG TTTTTTATCTATATG spnII-interrupted-C 1102751 - 1099497 - | type II restriction endonuclease, putative TERM 1355 1102420 - 1102436 + g 79 -6.7 -4.59853 | opp_overlap 1102420 TGCTGAACAAACTTA TCAAAAA GAT TTTTTGA TTTTTCAGGAGTTCC spnII-interrupted-N 1104793 - 1102916 - | type II restriction endonuclease, putative TERM 1356 1103429 - 1103415 - G 70 -2.8 -5.07652 | opp_overlap 1103416, overlap 1103416 TTTTTGAAAACAAAA TCTAAC TGA GTTAGT GATTTCGAAACAATT TERM 1357 1104040 - 1104062 + g 70 -3.4 -4.90778 | opp_overlap 1104041 1104045, overlap 1104041 CTAGCTCATCCGCAA ACAAACTCAA TTG TTGAGATTGC TTTTGTTTAGCTGAA TERM 1358 1104057 - 1104045 - G 74 -6.3 -4.42806 | opp_overlap 1104041 1104040, overlap 1104041 TCATCCGCAAACAAA CTCAA TTG TTGAG ATTGCTTTTGTTTAG TERM 1359 1104241 - 1104229 - G 75 -7.7 -4.09685 | opp_overlap 1104229, overlap 1104232 TCTCACGCGCCAAAA GGAGA GAA TCTCC TTGATACTCATAACC spr1103 1105125 - 1104862 - | hypothetical protein spr1104 1105420 - 1105118 - | hypothetical protein TERM 1360 1105447 - 1105429 - R 71 -3.1 -5.10767 | opp_overlap 1105421, overlap 1105423 1105421 CAGTCAATATAAAAA GAACACC TTCTC AGCGTTC TTTCTATATCTCTGT vicX 1106260 - 1105451 - | metal-dependent hydrolase TERM 1361 1105911 - 1105923 + g 71 -6.3 -4.17089 | TCGATGTCGATATCT CCAAA GGT TTTGG TTTTACCCATTTCAA hk02 1107611 - 1106262 - | sensory box sensor histidine kinase rr02 1108359 - 1107604 - | DNA-binding response regulator mutY 1109538 - 1108363 - | A/G-specific adenine glycosylase TERM 1362 1108984 - 1108964 - G 71 -6.1 -4.25848 | opp_overlap 1108967, overlap 1108967 AAGGCTTGATTAAAA TCACCCGGA CGA TCCGGATTA ATCAAGATCTCCATC TERM 1363 1109676 - 1109694 + r 78 -10.4 -2.61383 | overlap 1109675 GCTAGCCGCAGGTTG CTCAAAAC ACT GTTTTGAG GTTGTGGATAGAACT TERM 1364 1109845 - 1109819 - R 95 -8.8 -5.252 | opp_overlap 1109822 CAGTCTGAGAAAAAA TGAGCTTGGATA TTA TTTCCAAACTCA CTTAAAGTCAATTTC fhs 1111537 - 1109867 - | formate--tetrahydrofolate ligase TERM 1365 1111936 - 1111914 - g 71 -4.9 -4.51097 | gap 1, overlap 1111915 1111917 TTAATTACGACAAAA CGAG-CTCTG AAGC CAGAGCCTCA TCCTAACCTAAGTAT TERM 1366 1111932 - 1111917 - g 70 -9 -3.2043 | overlap 1111915 1111914 ATTACGACAAAACGA GCTCTG AAGC CAGAGC CTCATCCTAACCTAA dfp-C-terminus 1111752 - 1112456 + | phosphopantothenate--cysteine ligase dfp-N-terminus 1112468 - 1113019 + | phosphopantothenoylcysteine decarboxylase spr1112 1113003 - 1113566 + | hypothetical protein TERM 1367 1113603 - 1113570 - f 86 -5.3 -5.75538 | opp_overlap 1113573, overlap 1113573 TTGAAAAAATAAAAA CAATCTCCGCTTTCA AACC TGAAGGTGGAGATTT TGCTCTATACAGTTT TERM 1368 1113600 - 1113573 - f 88 -7 -4.8855 | opp_overlap 1113573, overlap 1113570 AAAAAATAAAAACAA TCTCCGCTTTCA AACC TGAAGGTGGAGA TTTTGCTCTATACAG TERM 1369 1113573 - 1113600 + F 100 -11.4 -4.39166 | opp_overlap 1113573 1113570 AAAAAATAAAAACAA TCTCCGCTTTCA AACC TGAAGGTGGAGA TTTTGCTCTATACAG TERM 1370 1114031 - 1114041 + G 73 -5.4 -4.49644 | GCAGTTTTTGTCATC CTAG CCT CTAG TTTTGGATTTTTGAT spr1113 1113794 - 1114375 + | hypothetical protein TERM 1371 1114872 - 1114843 - g 84 -10 -3.84017 | opp_overlap 1114846, overlap 1114846 GAAGCCGAAACACAA CAAGACCTCCAC TATATC GAGGAGGCCTTG GATCAGCTAGGTTAT spr1114 1114387 - 1114902 + | hypothetical protein spr1115 1115366 - 1114899 - | hypothetical protein TERM 1372 1115001 - 1115027 + g 79 -6.6 -4.56597 | opp_overlap 1115001 TGGTAGCATATCATA GGCCAGATTTAA GTT TGGAATCTGGTC TTTTTGCACCCAAGA spr1116 1115928 - 1115440 - | hypothetical protein spr1117 1116457 - 1115894 - | hypothetical protein uvrB 1118455 - 1116467 - | excinuclease ABC subunit B spr1119 1119485 - 1118532 - | hypothetical protein TERM 1373 1119597 - 1119567 - H 76 -7.8 -3.91947 | opp_overlap 1119566 1119567 AAAAGGAAAAATCAA TGTTATATTTTCTG ACA CGAAAAATATAACA ATTTGCCTTTTTTTA glnP 1119658 - 1121823 + | amino acid ABC transporter permease/amino acid-binding protein TERM 1374 1121860 - 1121839 - g 74 -3.9 -5.0925 | gap 1, overlap 1121843 TGGCAAAATTAAAAA TTGATGTAAA TGA TTTACA-CAA GCACTATGGAAAAAA TERM 1375 1122051 - 1122040 - g 76 -4.4 -5.16572 | ATTTAACTGAAAAAA CAAC CAAT GTTG ACCACGTCCGTGAAA glnQ 1121823 - 1122563 + | amino acid ABC transporter ATP-binding protein TERM 1376 1122571 - 1122590 + F 95 -8.6 -4.88736 | opp_overlap 1122571 ACGTCTAAACTCAAA CTGTAAGG ATTT CCTTGCAG TTTTTCTACCTCGTA TERM 1377 1122668 - 1122656 - f 73 -7.7 -3.76759 | ATTAAGTTTATGAAA TGAGG TTT CCTCA TACCTAGCAAGACTA zwf 1122712 - 1124199 + | glucose-6-phosphate 1-dehydrogenase TERM 1378 1124233 - 1124205 - T 89 -3.1 -5.88565 | opp_overlap 1124207, overlap 1124206 1124207 CTTAGAATAAAAAAA TTTCCTGCAAG TTTATGC CTTGCAGGATT TTTGCTTCTGATTAG TERM 1379 1124232 - 1124206 - T 71 -6.6 -4.11512 | opp_overlap 1124207, overlap 1124205 1124207 TTAGAATAAAAAAAT TTCCTGCAAG TTTATGC CTTGCAGGAT TTTTGCTTCTGATTA TERM 1380 1124207 - 1124231 + T 100 -10.1 -4.95876 | opp_overlap 1124207 1124206 1124205 TAGAATAAAAAAATT TCCTGCAAG TTTATGC CTTGCAGGA TTTTTGCTTCTGATT TERM 1381 1124231 - 1124207 - T 77 -10.1 -3.05281 | opp_overlap 1124207, overlap 1124206 1124205 TAGAATAAAAAAATT TCCTGCAAG TTTATGC CTTGCAGGA TTTTTGCTTCTGATT ftsY 1125522 - 1124245 - | signal recognition particle-docking protein FtsY TERM 1382 1124657 - 1124667 + g 79 -6.8 -4.62336 | overlap 1124658 TCAAAGACCACGCTG GCTG GAT CAGC TTTTTCAGGTCCAGT spr1124 1126344 - 1125526 - | Cof family protein spr1125 1127138 - 1126344 - | Cof family protein smc 1130674 - 1127135 - | chromosome condensation and segregation SMC protein TERM 1383 1128607 - 1128624 + g 71 -4.1 -5.00267 | overlap 1128616 CTTCTGAACCCAAGC TTGCTTC ATCT GCAGCAA TTTCTTTTTGTAATT rnc 1131363 - 1130665 - | ribonuclease III TERM 1384 1131528 - 1131515 - R 85 -4.5 -5.73978 | opp_overlap 1131515 AGGATAAAGAAAAAA GCCCT ATTA AAGGC TTTTTAGGATGTTTA guaC 1132667 - 1131681 - | guanosine 5'-monophosphate oxidoreductase TERM 1385 1132859 - 1132829 - R 72 -2.6 -5.26119 | gap 1, opp_overlap 1132833, overlap 1132833 1132835 GTGTTAAAAATAAAA GAAAGAGGGGAAA TTATTT TCTCCCCACTT-C TTCATCAATAATCGC TERM 1386 1132854 - 1132833 - R 77 -5.1 -5.098 | opp_overlap 1132833, overlap 1132829 1132835 TAAAAATAAAAGAAA GAGGGGAAA TTAT TTTCTCCCC ACTTCTTCATCAATA spr1129 1134185 - 1132842 - | hypothetical protein spr1130 1136079 - 1134145 - | endonuclease, putative TERM 1387 1135060 - 1135073 + gr 70 -3.1 -4.84353 | overlap 1135061 AAAATTATCTTGTCC TCCAA TCAA TTGGG TTTCTTTTGCTTTCT TERM 1388 1136227 - 1136189 - R 88 -7.5 -4.91429 | opp_overlap 1136189 AAATTCTAAACAAAA GCCCAGTGTTAGGAGCT TTAAT ATCTCATAACACTAGAC TTCTTCTCTATCCTA spr1131 1136410 - 1136240 - | hypothetical protein spr1132 1136564 - 1136391 - | hypothetical protein leuD-truncation 1137385 - 1137026 - | 3-isopropylmalate dehydratase small subunit, truncation TERM 1389 1137263 - 1137275 + g 70 -7.7 -3.75598 | opp_overlap 1137262 TCTAGGCTGAACGAT TGGCA ACA TGCCA TTATTGAGTTCATTA spr1134 1137658 - 1137389 - | hypothetical protein leuB 1138692 - 1137655 - | 3-isopropylmalate dehydrogenase leuA-truncation 1139138 - 1138704 - | 2-isopropylmalate synthase, truncation leuA-truncation 1139798 - 1139166 - | 2-isopropylmalate synthase, truncation spr1138 1140473 - 1139817 - | hypothetical protein TERM 1390 1140483 - 1140502 + r 70 -7.2 -3.76387 | gap 1, opp_overlap 1140483 AAACATAAGTGAAAA CTGCTA-CC CAA GGCTAGCAG TTCCTTTCTATTTTT TERM 1391 1140502 - 1140483 - R 78 -7.2 -4.36778 | gap 1, opp_overlap 1140483 AAACATAAGTGAAAA CTGCTA-CC CAA GGCTAGCAG TTCCTTTCTATTTTT cutC 1141149 - 1140517 - | copper homeostasis protein CutC TERM 1392 1140721 - 1140737 + g 70 -9.5 -2.55253 | ACGAGTGACACCGGC TTGACTG AGC CAGTCAA TAGCTTCCGGTTGAT spr1140 1141601 - 1141242 - | hypothetical protein TERM 1393 1141701 - 1141675 - R 89 -8.7 -4.41895 | opp_overlap 1141675 1141672 AAGTTCTAACCAAAA GGAGCCTGAAA TTTAC TTTCGGGCCCC TCCTCTTATTTAATC topA 1143812 - 1141707 - | DNA topoisomerase I TERM 1394 1143083 - 1143057 - G 77 -8 -4.19817 | opp_overlap 1143057 1143076, overlap 1143078 CTGATCTACTGAAAA GTCTTTACTCGT CAG ACGAGACAAGAC TTCCTTGACTTCGTT TERM 1395 1143900 - 1143885 - R 75 -4.8 -4.92791 | TATAATAGAAGAAAA GTTTTA TACT TAAAAC CTCAGTCTTCCTTTG spr1142 1145004 - 1143961 - | hypothetical protein spr1143 1145383 - 1145198 - | hypothetical protein TERM 1396 1145628 - 1145648 + r 72 -8.3 -3.35996 | overlap 1145629 AGCTAGCCACAGGTT GCTCAAAGC ACT GCTTTGAGG TTGTAGATAAGACTG TERM 1397 1145629 - 1145647 + r 84 -11.8 -2.61383 | overlap 1145628 GCTAGCCACAGGTTG CTCAAAGC ACT GCTTTGAG GTTGTAGATAAGACT TERM 1398 1145779 - 1145825 + r 91 -12.6 -3.33315 | opp_overlap 1145784, overlap 1145784 ACTAATCCACTTAGA AAAAACGCATATTATCAAGTGT TAA AAACTTGCTAATATGCGTTTTA TTATGGAAATGTTGG TERM 1399 1145820 - 1145784 - R 100 -12.5 -5.28176 | opp_overlap 1145779 1145784 TCCACTTAGAAAAAA CGCATATTATCAAGTGT TAA AAACTTGCTAATATGCG TTTTATTATGGAAAT TERM 1400 1145784 - 1145820 + r 100 -12.5 -4.77567 | opp_overlap 1145784, overlap 1145779 TCCACTTAGAAAAAA CGCATATTATCAAGTGT TAA AAACTTGCTAATATGCG TTTTATTATGGAAAT smf 1146754 - 1145894 - | DNA processing protein DprA, putative TERM 1401 1146828 - 1146807 - R 89 -6.6 -5.59502 | TAAAAAATCAAAAAA CATCCGAC TATTTT GTCAGATG TTGGAATCTTTAATT licC 1147527 - 1146838 - | hypothetical protein licB 1148429 - 1147539 - | hypothetical protein pck 1149276 - 1148407 - | choline kinase spr1148 1150333 - 1149293 - | zinc-containing alcohol dehydrogenase ispD 1151027 - 1150320 - | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase TERM 1402 1151273 - 1151261 - H 75 -4.9 -4.86731 | opp_overlap 1151261 TTTCCTTAAAGAAAA CTTAA AAC TTAAG ATTTGAAACTTCAAA spr1150 1151363 - 1152850 + | polysaccharide biosynthesis protein, putative TERM 1403 1153490 - 1153480 - g 70 -5.4 -4.48175 | AAAATTTAAGGAAAA GGAA GTC TTCC CAAGTGGTACCTTTG licD1 1152860 - 1153663 + | required for phosphorylcholine incorporation in teichoic and lipoteichoic acids licD2 1153665 - 1154474 + | licD protein TERM 1404 1154608 - 1154558 - T 100 -30.4 -3.32819 | opp_overlap 1154558 1154563, overlap 1154563 TACATATTCCCACAA TAAAACGCATCATATCAAGGTTTT TGA AAAACCTTGATATGATGCGTTTTA TAATTTTAAAGACTT TERM 1405 1154558 - 1154608 + T 100 -30.4 -3.08776 | opp_overlap 1154558 1154563, overlap 1154563 TACATATTCCCACAA TAAAACGCATCATATCAAGGTTTT TGA AAAACCTTGATATGATGCGTTTTA TAATTTTAAAGACTT TERM 1406 1154603 - 1154563 - T 100 -25.9 -4.77567 | opp_overlap 1154558 1154563, overlap 1154558 ATTCCCACAATAAAA CGCATCATATCAAGGTTTT TGA AAAACCTTGATATGATGCG TTTTATAATTTTAAA TERM 1407 1154563 - 1154603 + T 100 -25.9 -4.67635 | opp_overlap 1154563 1154558, overlap 1154558 ATTCCCACAATAAAA CGCATCATATCAAGGTTTT TGA AAAACCTTGATATGATGCG TTTTATAATTTTAAA carB 1157925 - 1154749 - | carbamoyl phosphate synthase large subunit carA 1159317 - 1158238 - | carbamoyl phosphate synthase small subunit TERM 1408 1158825 - 1158809 - G 72 -8.7 -3.58522 | overlap 1158814 AGCACCACGCTCAAA CCAACTC CTG GAGCTGG ATAAGACGTTTTAGT TERM 1409 1159334 - 1159349 + r 71 -6.8 -4.20712 | overlap 1159344 TTTTCACCTCTCGTG GACGCT CACT GGCGTC TTTTAACGTCTTGTG pyrB 1160290 - 1159367 - | aspartate carbamoyltransferase catalytic subunit pyrR 1160830 - 1160309 - | pyrimidine regulatory protein PyrR TERM 1410 1160871 - 1160852 - R 100 -10.8 -5.26119 | opp_overlap 1160847, overlap 1160863 CCTCCAAAAAGAAAA GTCTCCTT AAAC AAGGAGAC TTGAAATTTATAGCC nth 1161670 - 1161041 - | endonuclease III TERM 1411 1161634 - 1161652 + g 86 -4.5 -5.40072 | overlap 1161637 GGGCAATGATTTCTT CTAGCAC CTTTC GTGCTCG TTTTTTTGACAAGAC spr1158 1162212 - 1161670 - | hypothetical protein spr1159 1162334 - 1162522 + | hypothetical protein spr1160 1162519 - 1162698 + | hypothetical protein TERM 1412 1162791 - 1162830 + F 76 -4.6 -5.20633 | gap 1, opp_overlap 1162804, overlap 1162795 GGAGACATGAACAGC TAAG-TCTATCAAATAAAG AAC CTTTATTTAGTAGATCTTG TTTTTGTCTCTTTTT TERM 1413 1162795 - 1162825 + F 73 -7.8 -3.89226 | opp_overlap 1162804, overlap 1162791 ACATGAACAGCTAAG TCTATCAAATAAAG AAC CTTTATTTAGTAGA TCTTGTTTTTGTCTC TERM 1414 1162908 - 1162929 + F 95 -8.8 -5.19328 | TGACATAGACTTTGG GCTCTACT AGGTAA AGTAGAGC TTTTTGTTATGCACT TERM 1415 1163210 - 1163199 - g 73 -5.8 -4.59109 | TACATTCCTCAAAAA GTCC CTGA GGAC CTAAAAAAGAAAACT TERM 1416 1163666 - 1163650 - g 78 -7.3 -4.41616 | overlap 1163631 1163658 ATTTTGCCAAACAAA GTCAGCA AGC TGCTAAC AACCAAAGAGCCTAC ABC-NBD 1162971 - 1164497 + | ABC transporter ATP-binding protein TERM 1417 1164573 - 1164608 + T 100 -12.1 -4.7416 | opp_overlap 1164573 CTTCCCATAGTAAAA CGCATAATATCAAGT TTTCAC ACCTGATATTATGCG TTTTTCAGATTTTAA TERM 1418 1164608 - 1164573 - T 100 -14.3 -4.34402 | opp_overlap 1164573 CTTCCCATAGTAAAA CGCATAATATCAAGT TTTCAC ACCTGATATTATGCG TTTTTCAGATTTTAA htpX 1165554 - 1164646 - | heat shock protein HtpX TERM 1419 1164683 - 1164720 + g 77 -7.7 -4.19336 | opp_overlap 1164683 1164700, overlap 1164673 ATCCGTTCTGAGATA GGTGGGTGGGTATAAAA GAGT TTTTGGAACCCCCCACC TTTCTTGGGATCATT lemA 1166107 - 1165547 - | cytoplasmic membrane protein gidB 1166177 - 1166914 + | glucose-inhibited division protein B TERM 1420 1166994 - 1166980 - f 81 -5.8 -5.00884 | AGGCTCGGGAAAAAA TGATTT ACA AAATCA GCCTCGCTCTTTTAT TERM 1421 1167043 - 1167029 - f 81 -5.8 -5.00884 | AGGCTCGGGAAAAAA TGATTT ACA AAATCA GCCTCGCTCTTTTAT TERM 1422 1167067 - 1167103 + F 76 -9.7 -2.87468 | opp_overlap 1167078, overlap 1167070 1167078 CTTTTATTTCTAGGC TCGGGAAAAAATGATTT ACA AAATCATTTTTTTCTGC TATACTATCCTAAGC TERM 1423 1167070 - 1167100 + F 84 -12.2 -2.6891 | opp_overlap 1167078, overlap 1167067 1167078 TTATTTCTAGGCTCG GGAAAAAATGATTT ACA AAATCATTTTTTTC TGCTATACTATCCTA TERM 1424 1167078 - 1167092 + F 88 -5.8 -5.69473 | opp_overlap 1167078, overlap 1167070 1167067 AGGCTCGGGAAAAAA TGATTT ACA AAATCA TTTTTTTCTGCTATA TERM 1425 1167092 - 1167078 - f 81 -5.8 -5.00884 | opp_overlap 1167078 1167070 1167067 AGGCTCGGGAAAAAA TGATTT ACA AAATCA TTTTTTTCTGCTATA pyrP 1167230 - 1168549 + | Uracil permease TERM 1426 1168554 - 1168544 - T 74 -5.4 -4.75288 | CCATACGAAAATAAA GACT AAG AGTC TAAATACACCTAATC TERM 1427 1168589 - 1168568 - T 91 -13.1 -3.21872 | opp_overlap 1168568, overlap 1168559 TCTAAATACACCTAA TCCACTCAG ACAG CTGAGTGGA TTTTTCGTATACCAT TERM 1428 1168568 - 1168589 + T 100 -13.1 -4.80882 | opp_overlap 1168559 1168568 TCTAAATACACCTAA TCCACTCAG ACAG CTGAGTGGA TTTTTCGTATACCAT ffh 1170315 - 1168744 - | signal recognition particle protein TERM 1429 1169998 - 1169968 - G 83 -9.8 -3.80461 | opp_overlap 1169961 1169991, overlap 1169993 CAATTTACCAGCAAA GGTTGTTTTACCAG CCC CTTGTAAACCAACC ATCATGATGATGGTT TERM 1430 1170015 - 1169993 - G 100 -15 -3.53444 | opp_overlap 1169991, overlap 1169968 CCAGCCCCTTGTAAA CCAACCATCA TGA TGATGGTTGG AATCTTAGGTGACTT spr1167 1170659 - 1170327 - | hypothetical protein spr1168 1171127 - 1170750 - | hypothetical protein TERM 1431 1171761 - 1171781 + GH 70 -8.3 -3.24747 | overlap 1171775 ATGGGGAATTTGACC TGACTCGAA TCC TCCGAGTCA TTCGTCCTATCGAAA TERM 1432 1172354 - 1172320 - gH 80 -2.1 -5.626 | gap 1, overlap 1172321 1172322 1172324 GATTTTACAAAAAAA TGGAGAACTGGC-AGA ACTC TCTAGCCTGTCCCCTA TCGTCCAATCCCTTG spr1169 1171103 - 1172503 + | hypothetical protein TERM 1433 1173291 - 1173252 - g 84 -2.1 -5.75822 | overlap 1173253 1173285 CAGAAATCAAAAAAA TCGCCAAATACATCACT AAAACA AATGACGAATCCGGCGT TGCCCACGCCATCCG spr1170 1172516 - 1173322 + | Cof family protein TERM 1434 1173364 - 1173337 - T 93 -12.8 -3.39349 | opp_overlap 1173343, overlap 1173343 AAAGGAAAGAATAGA CTAAAACCGCTC AGCT GAGCGGTTTTTG ATGTCTAATTACTGC TERM 1435 1173343 - 1173358 + T 100 -10.4 -4.85129 | opp_overlap 1173337 1173343 AAGAATAGACTAAAA CCGCTC AGCT GAGCGG TTTTTGATGTCTAAT TERM 1436 1173358 - 1173343 - T 100 -10.4 -4.45723 | opp_overlap 1173343, overlap 1173337 AAGAATAGACTAAAA CCGCTC AGCT GAGCGG TTTTTGATGTCTAAT TERM 1437 1173459 - 1173476 + T 100 -9.9 -5.16237 | opp_overlap 1173459 GGAGCTAGATAAAAA CTCTGCT GAAA AGCAGAG TTTTTTAGTCGAATT TERM 1438 1173476 - 1173459 - T 100 -9.9 -4.99035 | opp_overlap 1173459 GGAGCTAGATAAAAA CTCTGCT GAAA AGCAGAG TTTTTTAGTCGAATT rplS 1173837 - 1173490 - | 50S ribosomal protein L19 crcB 1174285 - 1173956 - | CrcB protein crcB 1174653 - 1174279 - | CrcB protein spr1174 1174916 - 1174650 - | hypothetical protein TERM 1439 1174876 - 1174888 + g 71 -6.3 -4.16016 | TTGACAATTTGGTCG TCGAT TTG ATCGA TTTCTTGACGAATAA TERM 1440 1175022 - 1174998 - R 84 -6.5 -5.18726 | opp_overlap 1174998 TCTCGATAAGAAAAA TGCACTGAT TGATTAC ATCAGCGCA CTTTTATGTTTATCC flaV 1175475 - 1175032 - | flavodoxin TERM 1441 1175555 - 1175538 - H 78 -2.1 -5.61881 | gap 1 TTTTAAAAATAAAAA TTC-TTGT GCT ACAATGAA ATGAGAAAGAATTGA TERM 1442 1175745 - 1175721 - g 91 -7.9 -5.24531 | opp_overlap 1175732, overlap 1175722 ATTTCCCAGAAAAAA CCATCAAAGCC GTC GGTTTTGATGA ACCAACTCTTACTTG TERM 1443 1175744 - 1175722 - g 76 -9.2 -3.73995 | opp_overlap 1175732, overlap 1175721 TTTCCCAGAAAAAAC CATCAAAGCC GTC GGTTTTGATG AACCAACTCTTACTT spr1176 1175567 - 1176514 + | DHH subfamily 1 protein TERM 1444 1176637 - 1176619 - g 82 -3.9 -5.46698 | TGCAAAATGAAAAAA GATATCC ATCCA GAATATC GCCCAGTTGTCTTCA rpmE2 1176610 - 1176852 + | 50S ribosomal protein L31 type B TERM 1445 1176861 - 1176878 + T 95 -6.3 -5.80003 | opp_overlap 1176859 1176861 CAAATAATGATAAGA GAACAGT TTCG GCTGTTC TTTTTTGTTTCTTGA spr1178 1177487 - 1176909 - | hypothetical protein TERM 1446 1177408 - 1177393 - GT 87 -3.2 -5.72622 | overlap 1177395 TTCACAAAGAAAAAA CTCAAG CTTT CTTGGG CACCTGCTGGGGAAA TERM 1447 1177472 - 1177434 - GT 70 -2.7 -5.04356 | overlap 1177441 1177448 GGAAAGAATTAAAAA TGACAAAGCTAAAA-CTAG TAA CCAGCTTTTAGCCTT-CCA ATAATTTCTGACCAA TERM 1448 1177466 - 1177441 - GT 74 -6.3 -4.27774 | gap 1, overlap 1177434 1177448 ATTAAAAATGACAAA GCTAAAA-CTAG TAA CCAGCTTTTAGC CTTCCAATAATTTCT spr1179 1178466 - 1177462 - | hypothetical protein transposase_C 1178784 - 1178518 - | degenerate transposase TERM 1449 1179384 - 1179396 + H 80 -2.7 -5.64421 | opp_overlap 1179380, overlap 1179380 AATTGAAAGAATTTT TAGAA AAT TTCTG TTTTTTCTTTACAGT gdhA 1179472 - 1180818 + | glutamate dehydrogenase TERM 1450 1180834 - 1180856 + T 95 -8.5 -4.90013 | GATTTATTTGCTTAA TCCTCAATC ACTAC GATTGGGGA TTTTTAGTTGAGTTA TERM 1451 1181168 - 1181149 - T 100 -8.6 -6.01725 | opp_overlap 1181148 1181149 AACAAAAAGAAAAAA CGCTACTC CTAA GAATAGCG ATTTAATCATGTTTT spr1182 1181484 - 1181314 - | hypothetical protein ABC-NBD-truncation 1182138 - 1181497 - | ABC transporter ATP-binding protein spr1184 1182410 - 1182847 + | hypothetical protein spr1185 1183341 - 1183138 - | hypothetical protein TERM 1452 1183365 - 1183403 + r 77 -9.1 -3.31144 | gap 2, opp_overlap 1183364 1183368 1183369 1183393, overlap 1183368 CCTTATGGATTAGAG GAAGC-GCT-CCTTGGTTT CAC GAATCAAGGCAGCAGCTTC TTCTACAACTGGACG npl-truncation 1184090 - 1183359 - | N-acetylneuraminate lyase subunit, truncation npl-truncation 1184276 - 1184181 - | N-acetylneuraminate lyase subunit, truncation cdd 1184715 - 1184308 - | cytidine deaminase TERM 1453 1184970 - 1184915 - R 93 -12.4 -3.40622 | gap 1, opp_overlap 1184914, overlap 1184913 TATGCGGAAAATATA TTTGGTTTCTAGATTTATCATTATCCA ATT TGAATGACAAT-AATCTAGAAACCAAA CGCTTTATTATTTAC spr1189 1185491 - 1185003 - | hypothetical protein TERM 1454 1185236 - 1185269 + g 71 -3.9 -4.98255 | overlap 1185239 CATACAATGGATTAT CTTTCTCCATAATCT TTTG AAATTCTGGAGATAG TTTTTGTGCTTCAGC spr1190 1186914 - 1185496 - | hypothetical protein TERM 1455 1186767 - 1186743 - G 77 -5.1 -4.96388 | AATCATCAAAGAAAA CATTTGGATAA CTG TTATCAAAACG AATTTCCCATGGTTT TERM 1456 1186882 - 1186866 - G 72 -4.5 -4.8269 | opp_overlap 1186856 1186866 GATAAGGATTAAAAA TTCCTTT ATC AAAGAAA TATATTTTTTTATTT appD 1188897 - 1186915 - | ABC transporter ATP-binding protein - oligopeptide transport appC 1189761 - 1188910 - | ABC transporter membrane-spanning permease - oligopeptide transport TERM 1457 1189683 - 1189659 - G 70 -8.7 -3.32562 | overlap 1189661 ATAAAGGTGCTAGAA TACATGCTAAT AGA ATTAGCATGAA GCATATAAAGCCGAT TERM 1458 1189681 - 1189661 - G 82 -11.3 -3.22668 | overlap 1189659 AAAGGTGCTAGAATA CATGCTAAT AGA ATTAGCATG AAGCATATAAAGCCG appB 1190773 - 1189778 - | ABC transporter membrane-spanning permease - oligopeptide transport TERM 1459 1190797 - 1190749 - G 79 -5.6 -5.00616 | overlap 1190752 TTTCTCCTGAAAAAA CAAGAGTG-AGAGATACATGATTC AAT AAACCA-GCATCTCTACACTCCTA AAAGATTATCAAACT TERM 1460 1190794 - 1190752 - G 81 -7.3 -4.61482 | overlap 1190749 CTCCTGAAAAAACAA GAGTG-AGAGATACATGATTC AAT AAACCA-GCATCTCTACACTC CTAAAAGATTATCAA appA 1192466 - 1190838 - | ABC transporter substrate-binding protein - oligopeptide transport TERM 1461 1191341 - 1191359 + g 72 -4.6 -4.82678 | overlap 1191344 TGCTATTATCGTATT TAGCTTCT TTA AGAAGTTG TTTTGCTTTTTCTGG TERM 1462 1191344 - 1191356 + g 74 -6.3 -4.47007 | overlap 1191341 TATTATCGTATTTAG CTTCT TTA AGAAG TTGTTTTGCTTTTTC TERM 1463 1192363 - 1192376 + g 83 -5.3 -5.26875 | TTTTCTTTTCCAGAC TCTGA AAAA TCAGA TTTTTTGCTTCCCGA spr1195 1193471 - 1192548 - | hypothetical protein nanE 1194193 - 1193495 - | N-acetylmannosamine-6-phosphate 2-epimerase IS1381-truncation 1194503 - 1194240 - | degenerate transposase (orf2) TERM 1464 1194298 - 1194340 + g 85 -7.2 -4.98531 | overlap 1194285 1194324 ATTCGTAATCCGAAG CGTTTACGATGATTTCGATA GGT TGTTGAAAACATTTTAAACG TTTTTACTTTGGCAA transposase_D 1194544 - 1194648 + | degenerate transposase spr1199 1195307 - 1195086 - | hypothetical protein TERM 1465 1195701 - 1195721 + r 88 -6.2 -5.58454 | gap 1, opp_overlap 1195701 TTGTCGCTAAAAAAA TGCATCAGG TTAT CCTG-TGCA TTTTTTTGATATCAA TERM 1466 1195721 - 1195701 - R 86 -6.2 -5.40072 | gap 1, opp_overlap 1195701 TTGTCGCTAAAAAAA TGCATCAGG TTAT CCTG-TGCA TTTTTTTGATATCAA spr1200 1195921 - 1195742 - | hypothetical protein TERM 1467 1195986 - 1195959 - R 100 -9.2 -4.8667 | opp_overlap 1195959 TACAGTTGACAAAAA GACAAACCAGCC TAAT GACTAGCTTGTC TTCAATCAAGAGAGG spr1201 1197690 - 1196371 - | hypothetical protein ABC-NDB 1198451 - 1197693 - | ABC transporter ATP-binding protein TERM 1468 1198063 - 1198073 + g 88 -2.6 -5.9873 | AAGTTTTCTACATTT TTAA TAG TTAA TTTTTTTTGTGATAA ABC-NP 1200055 - 1198448 - | drug efflux ABC transporter, ATP-binding/permease protein TERM 1469 1198651 - 1198662 + g 100 -4.4 -5.93252 | opp_overlap 1198647 TTCTAATCAGAGCTC TAGC TAAA GCTA TTTTTTGTTTTTGAC ptrB 1201992 - 1200052 - | prolyl oligopeptidase family protein spr1205 1204661 - 1202025 - | hypothetical protein TERM 1470 1203985 - 1204001 + g 80 -2.2 -5.61913 | opp_overlap 1203987, overlap 1203987 GCATTATCTATAATA AAGGGA AAGTC TCCCTG TTTTTTATCTTTCTT TERM 1471 1203999 - 1203987 - G 70 -5.5 -4.33819 | opp_overlap 1203987 1203985 ATTATCTATAATAAA GGGAA AGT CTCCC TGTTTTTTATCTTTC TERM 1472 1204726 - 1204704 - R 100 -16.4 -5.30616 | TTATTTAAATAAAAA GGGAGAATCC TTT GGATTCTCCC CATATAAGCACTAAC spr1206 1205739 - 1205152 - | hypothetical protein spr1207 1206368 - 1205988 - | hypothetical protein spr1208 1206701 - 1206423 - | hypothetical protein spr1209 1206963 - 1206709 - | hypothetical protein spr1210 1207172 - 1206960 - | hypothetical protein TERM 1473 1207181 - 1207157 - G 100 -9.4 -6.09196 | CTGAAAATAAAAAAA GGAGAACAAT ATTCA ACTGTTCTCC AAAATAATTTTATTA TERM 1474 1207231 - 1207207 - R 100 -10.8 -5.65496 | opp_overlap 1207222, overlap 1207208 TATTAAAAAGAAAAA CCCTGCCAAA GAATT TTTGGCAGGA AACCAAATCAATTTA TERM 1475 1207230 - 1207208 - R 95 -12.1 -3.96857 | opp_overlap 1207222, overlap 1207207 ATTAAAAAGAAAAAC CCTGCCAAA GAATT TTTGGCAGG AAACCAAATCAATTT rplL 1207689 - 1207321 - | 50S ribosomal protein L7/L12 rplJ 1208265 - 1207765 - | 50S ribosomal protein L10 TERM 1476 1208339 - 1208320 - g 85 -4.2 -5.61881 | TTTCAAAAAGAAAAA CGCGCCCA AACC TAGACACG AAAGTACAATACGCT TERM 1477 1208412 - 1208424 + G 89 -5.5 -5.41143 | AGTCGAGCTCCCCTA CTGTC TTA GGCAG TTTTTTTAAACCGTA spr1213 1208270 - 1208455 + | hypothetical protein TERM 1478 1208482 - 1208468 - T 70 -4.3 -4.8236 | opp_overlap 1208456 TAGTCAAAAAAAGAA TGCAA GATTT TTGCA AACTTTTTTTAAAAT trzA 1209831 - 1208515 - | chlorohydrolase TERM 1479 1209851 - 1209863 + r 71 -7.7 -3.58905 | CCGTAGGTGTGGTTA CTGAC TTC GTCAG TTCTATCTGCAACCT TERM 1480 1209941 - 1209921 - R 72 -8.3 -3.35996 | opp_overlap 1209938, overlap 1209922 CAGTCTTATCTACAA CCTCAAAGC TGT GCTTTGAGC AACCTACGGCTAGCT TERM 1481 1209940 - 1209922 - R 84 -11.8 -2.61383 | opp_overlap 1209938, overlap 1209921 AGTCTTATCTACAAC CTCAAAGC TGT GCTTTGAG CAACCTACGGCTAGC ABC-N/P 1211866 - 1210076 - | ABC transporter permease/ATP-binding protein TERM 1482 1211664 - 1211650 - GR 81 -5.7 -5.03747 | overlap 1211661 AAATCTGCCAAAAAA CTGGT GATGA ACCAG CCACTAGGACTTGGT ABC-N/P 1213553 - 1211829 - | ABC transporter permease/ATP-binding protein TERM 1483 1213583 - 1213608 + r 83 -6.1 -5.18866 | opp_overlap 1213585 1213589, overlap 1213585 CATATTCTAGAAATG AAGAAAGTGGG AAGC CCCACTCTCTG TTTTATTTGTTTAAG TERM 1484 1213585 - 1213606 + r 85 -8.7 -4.20284 | opp_overlap 1213585 1213589, overlap 1213583 TATTCTAGAAATGAA GAAAGTGGG AAGC CCCACTCTC TGTTTTATTTGTTTA TERM 1485 1213606 - 1213585 - R 89 -10.9 -3.61244 | opp_overlap 1213585 1213583, overlap 1213589 TATTCTAGAAATGAA GAAAGTGGG AAGC CCCACTCTC TGTTTTATTTGTTTA TERM 1486 1213602 - 1213589 - R 83 -8.1 -4.42976 | opp_overlap 1213585 1213583, overlap 1213585 CTAGAAATGAAGAAA GTGGG AAGC CCCAC TCTCTGTTTTATTTG msrA 1214549 - 1213611 - | bifunctional methionine sulfoxide reductase A/B protein TERM 1487 1214639 - 1214651 + r 71 -7.7 -3.58905 | CCGTAGGTATGGTTA CTGAC TTC GTCAG TTCTATCTGCAACCT TERM 1488 1214728 - 1214710 - R 78 -10.4 -2.61383 | overlap 1214709 AGTTCTATCCACAAC CTCAAAAC ACT GTTTTGAG CAGCCTGCGGCTAGC thrB 1215714 - 1214845 - | homoserine kinase TERM 1489 1215285 - 1215269 - G 70 -9.5 -2.73771 | overlap 1215268 TCACACTCTGGAAAG TCTGCTA CGA TAGCAGA GACTTGCCCTTCAAC hom 1217035 - 1215716 - | homoserine dehydrogenase TERM 1490 1216486 - 1216518 + g 70 -9.1 -3.19668 | overlap 1216513 CGTAAGACCAGCCTT CTTCCACCATCTTGG TCA CCATGAAGTTGGAAG TTCCGTTGACTACTC TERM 1491 1217115 - 1217100 - R 100 -7.6 -5.98675 | opp_overlap 1217100 1217099 TATAAAAAGAAAAAA CGAATC AGAC GATTCG CTCTTCTTAAAATCT mecA 1217890 - 1217153 - | adaptor protein TERM 1492 1217979 - 1218015 + r 87 -10.9 -3.35996 | opp_overlap 1217980, overlap 1217980 1217989 CAGACAGATAGAAAA AGCCTTCAAAATCGGCT CTT AGCCGACTTTGAAGACC TTATACATCAGAATA TERM 1493 1217980 - 1218014 + r 93 -14.4 -2.61383 | opp_overlap 1217980, overlap 1217979 1217989 AGACAGATAGAAAAA GCCTTCAAAATCGGCT CTT AGCCGACTTTGAAGAC CTTATACATCAGAAT TERM 1494 1218014 - 1217980 - R 100 -18.8 -5.08178 | opp_overlap 1217980 1217979 1217989 AGACAGATAGAAAAA GCCTTCAAAATCGGCT CTT AGCCGACTTTGAAGAC CTTATACATCAGAAT spr1221 1219066 - 1218032 - | hypothetical protein TERM 1495 1219051 - 1219041 - G 70 -5.4 -4.43208 | overlap 1219027 AGATTTGCAAACAAA TCAG CTA CTGA ATAATGTTCAAACAT spr1222 1220528 - 1219095 - | hypothetical protein cps23FU 1221530 - 1220544 - | galactosyl transferase paralog spr1224 1222689 - 1221532 - | hypothetical protein licD1 1223470 - 1222625 - | LicD1 paralog TERM 1496 1223580 - 1223541 - R 84 -6.6 -5.07567 | opp_overlap 1223570 GCAGACTGTAAAAAA TCAAAGCCTGACTACTAT CCAA ATAGCTATCAAACTTTGA TTTTTCTGTCTTATA TERM 1497 1223570 - 1223580 + r 73 -4 -5.12474 | opp_overlap 1223541 CTATCCAAATAGCTA TCAA ACT TTGA TTTTTCTGTCTTATA spr1226 1225023 - 1223749 - | hypothetical protein TERM 1498 1224756 - 1224770 + g 100 -10 -5.42198 | opp_overlap 1224758 TAAAAATTCGTTTAA GACGGA GCT TCCGTC TTTTCTTTTTTGGAG pheA 1225868 - 1225020 - | prephenate dehydratase aroK 1226341 - 1225865 - | shikimate kinase aroA 1227629 - 1226334 - | 3-phosphoshikimate 1-carboxyvinyltransferase TERM 1499 1227690 - 1227664 - R 77 -5.2 -4.91511 | opp_overlap 1227684, overlap 1227684 ATTTTATCATAAAAA GCCAGAAATTCC TTA AAAATTCCTGAC TTTAGGATCGTTCTT spr1230 1228047 - 1227709 - | hypothetical protein tyrA 1229161 - 1228058 - | prephenate dehydrogenase TERM 1500 1228101 - 1228127 + g 72 -4.4 -4.67011 | opp_overlap 1228101 TTTTCTGTTATGAGA TGCTCAGCTCTT TCC AAGTCTTGAGCA TTTTTAAATGAAATT aroC 1230337 - 1229171 - | chorismate synthase aroB 1231414 - 1230347 - | 3-dehydroquinate synthase aroE 1232287 - 1231433 - | shikimate 5-dehydrogenase aroD 1232954 - 1232277 - | 3-dehydroquinate dehydratase spr1236 1234123 - 1232951 - | hypothetical protein TERM 1501 1234251 - 1234273 + r 100 -10.6 -4.96501 | opp_overlap 1234251 AATCACAATAAAAAA TGCTCTTCCG TCT TGGAGGAGCA TTTCTTTTTATCAAC TERM 1502 1234273 - 1234251 - R 93 -7.7 -5.59534 | opp_overlap 1234251 AATCACAATAAAAAA TGCTCTTCC GTCTT GGAGGAGCA TTTCTTTTTATCAAC spr1237 1236462 - 1234801 - | hypothetical protein TERM 1503 1235394 - 1235408 + gr 71 -6.4 -4.11216 | opp_overlap 1235394 GAATGTCTGGAACTA TCTGAG AAT CTCGGA TTTTGGAAATCAGAC TERM 1504 1235622 - 1235632 + gr 75 -5.4 -4.7373 | opp_overlap 1235622 CGTCATAAAAACGAG GAAG GAC CTTC TTTTTGGTCAGATAA ABC-NBD 1237222 - 1236416 - | ABC transporter ATP-binding protein TERM 1505 1236769 - 1236745 - GH 70 -3.6 -4.91109 | CCCCGATGACAAAAA CTTTCTGACG CATTC CATGAGAAAG GGTTTCAATAACCTG TERM 1506 1236952 - 1236962 + gH 73 -6.8 -4.14739 | overlap 1236945 CAATCTTTCGTTTGA TCGC CAA GCGA TTTTCCGATAACTCC amy 1237343 - 1238797 + | cytoplasmic alpha-amylase TERM 1507 1238815 - 1238836 + T 83 -5.1 -5.47159 | opp_overlap 1238815 GCTCATAATAACCAA GCTAGGTCC AAGC GGATTTGGC TTTTTTGTATTCACA TERM 1508 1238877 - 1238856 - T 88 -7.3 -4.87665 | opp_overlap 1238856 1238859 TTGTATTCACAAAAA GACCTACCC AAAT GGATAGATC TTTACTTGATTACAA alaS 1241505 - 1238887 - | alanyl-tRNA synthetase TERM 1509 1239217 - 1239237 + g 89 -6.8 -5.28942 | gap 1, overlap 1239219 ATCTTTGAAGATATC GCCTGCGGC TGCA GCTGC-GGC TTTTTCTTTCAACTC spr1241 1242024 - 1241527 - | hypothetical protein spr1242 1242526 - 1242287 - | hypothetical protein TERM 1510 1242768 - 1242748 - R 84 -8.3 -4.58395 | opp_overlap 1242746 1242748 TCTATTCCTTAAAAA CGAACCAGC TTG ACTGATTCG TCTTCTTACGTTTAT potD 1243857 - 1242787 - | spermidine/putrescine ABC transporter spermidine/putrescine-binding protein potC 1244627 - 1243854 - | spermidine/putrescine ABC transporter permease potB 1245451 - 1244624 - | spermidine/putrescine ABC transporter permease potA 1246568 - 1245411 - | spermidine/putrescine ABC transporter ATP-binding protein TERM 1511 1245600 - 1245618 + gr 73 -8.2 -3.61764 | overlap 1245597 GATGGCCTTACGGGT TGAGTGGA TCA TCCATTCA TTTCCAAGTTCGTCA murB 1247577 - 1246627 - | UDP-N-acetylenolpyruvoylglucosamine reductase TERM 1512 1247684 - 1247674 - R 76 -4.6 -5.18726 | opp_overlap 1247674 1247668, overlap 1247668 TTTGCATAAGAAAAA GAGG TTC CCCC CTTTTTATGATTTTT spr1248 1248441 - 1247689 - | hypothetical protein aldB 1249182 - 1248451 - | alpha-acetolactate decarboxylase spr1250 1249324 - 1250595 + | hypothetical protein TERM 1513 1250581 - 1250608 + T 95 -8.5 -5.3798 | opp_overlap 1250562 1250581 TTAAACTATTTAAAA GCAGAATTGGA ATGACA TCCAACTCTGC TTTTTCTTATTCTTC TERM 1514 1250608 - 1250581 - T 100 -10.7 -4.26079 | opp_overlap 1250581, overlap 1250562 TTAAACTATTTAAAA GCAGAATTGGA ATGACA TCCAACTCTGC TTTTTCTTATTCTTC glnH 1251430 - 1250615 - | amino acid ABC transporter amino acid-binding protein TERM 1515 1251481 - 1251493 + r 72 -2.7 -5.30575 | TAACGATATCCAAGT TACTT GTC AAGTG TTTTTTAAATTTTTA phoU 1252240 - 1251587 - | phosphate transporter PhoU TERM 1516 1252039 - 1252051 + g 74 -4.9 -4.69559 | overlap 1252028 GTTGTTGGAGTGCGA TCATT TCA AATGA TTTCTTTTCCAGTTT TERM 1517 1252152 - 1252140 - G 70 -5.5 -4.37886 | opp_overlap 1252143, overlap 1252143 TCATGCGTGACAAAA GCACG TAC CGTAC GATTGATTTGTGAGA pstB 1253010 - 1252252 - | phosphate ABC transporter ATP-binding protein TERM 1518 1252490 - 1252505 + g 73 -7.6 -4.12902 | AAAGCCGAAGTTGGC TCATCC AAGA GGATGA TTTTAGGACTAGTTG pstB 1253826 - 1253023 - | phosphate ABC transporter ATP-binding protein pstA 1254721 - 1253837 - | phosphate ABC transporter permease pstC 1255628 - 1254711 - | phosphate ABC transporter permease TERM 1519 1255564 - 1255540 - G 73 -7.9 -3.86206 | opp_overlap 1255539 1255542, overlap 1255542 ACTATCAAAGAAAGA CAGGCAAAGGT CAA ACCTTTTCCTA ATTTCTCCAGACGAG TERM 1520 1255562 - 1255542 - G 72 -8.3 -3.50491 | opp_overlap 1255542 1255539, overlap 1255540 TATCAAAGAAAGACA GGCAAAGGT CAA ACCTTTTCC TAATTTCTCCAGACG pstS 1256506 - 1255628 - | phosphate ABC transporter phosphate-binding protein spr1258 1257475 - 1257080 - | hypothetical protein spr1259 1258384 - 1257581 - | hypothetical protein TERM 1521 1258333 - 1258311 - G 93 -12.8 -4.07568 | opp_overlap 1258310 1258313 GCTTCCTCCTCAAAA GAGGCAAGAA AAT CTCTTGCCTC ATCTCCTAGTATCTC spr1260 1259233 - 1258385 - | inositol monophosphatase family protein TERM 1522 1258503 - 1258492 - GR 77 -5.8 -4.72986 | GAGCTTCACCAAAAA GGGT CACA ACCC GATAGCCCAGACTTT spr1261 1259426 - 1259148 - | hypothetical protein TERM 1523 1259389 - 1259359 - GR 100 -7 -5.56568 | gap 1, overlap 1259363 ACATCATTAAAAAAA GAAAGCACTGAAG CAAGTT CTTCAGTGC-TCC ACGACAAATCTAGTG TERM 1524 1259386 - 1259363 - GR 100 -11.1 -5.23943 | overlap 1259359 CATTAAAAAAAGAAA GCACTGAAG CAAGTT CTTCAGTGC TCCACGACAAATCTA spxA 1259827 - 1259426 - | transcriptional regulator Spx TERM 1525 1259907 - 1259935 + r 73 -8.3 -3.54459 | opp_overlap 1259909, overlap 1259892 1259889 1259909 GGATTTTTAGAAAAA AAGCCTATTTTTT CAA GAAAAATAGGCTG TTTGCGAACGATTGA TERM 1526 1259909 - 1259933 + r 87 -10.9 -3.34894 | opp_overlap 1259909, overlap 1259892 1259889 1259907 ATTTTTAGAAAAAAA GCCTATTTTTT CAA GAAAAATAGGC TGTTTGCGAACGATT TERM 1527 1259933 - 1259909 - R 100 -10.2 -5.61596 | opp_overlap 1259892 1259889 1259907 1259909 ATTTTTAGAAAAAAA GCCTATTTTT TCAAG AAAAATAGGC TGTTTGCGAACGATT spr1263 1260687 - 1260037 - | hypothetical protein nagD 1261417 - 1260644 - | N-acetyl-glucosamine matabolism spr1265 1262165 - 1261428 - | acyl-ACP thioesterase, putative hemN 1263300 - 1262170 - | coproporphyrinogen III oxidase TERM 1528 1263379 - 1263341 - R 100 -9.6 -4.9792 | opp_overlap 1263341 1263339 GATTCCAGATAAAAA TCACCATCCCCAGATACA TAG TCCGTCCGGAGATGGTGA TGGTTTATTCTTCTG spr1267 1263773 - 1263384 - | hypothetical protein spr1268 1264172 - 1263789 - | hypothetical protein lgt 1264973 - 1264173 - | prolipoprotein diacylglyceryl transferase hprK 1265904 - 1264954 - | HPr kinase/phosphorylase TERM 1529 1266007 - 1265989 - R 79 -3.9 -5.48213 | gap 1, opp_overlap 1265990, overlap 1265990 TATTTAAAAGAAAAA GGACTAGA TTTC TCTAG-CC TTTCATTTCAATTAG rpsU 1266219 - 1266019 - | 30S ribosomal protein S21 nagB 1267057 - 1266335 - | glucosamine-6-phosphate isomerase TERM 1530 1268024 - 1268004 - g 72 -8.3 -3.57263 | opp_overlap 1268012 1268017, overlap 1268012 AGTTTGATGGGCAAA TCCAAGCAG ATT CTGGTTGGA CCAATATCTTTATCA queA 1267181 - 1268221 + | S-adenosylmethionine:tRNA ribosyltransferase-isomerase TERM 1531 1268522 - 1268534 + T 71 -7.7 -3.58905 | GGATTATATATGTGA CTGAC TTC GTCAG TTCTATCTACAACCT TERM 1532 1268683 - 1268707 + T 71 -3 -5.06505 | gap 1 CACTTTTTTATAGTC GCTATAAGATG ACCT TATCT-ATAGC TTTTTATATATAATT spsA-truncation 1269159 - 1268770 - | choline binding protein TERM 1533 1269330 - 1269342 + r 71 -3.3 -5.02476 | CTTGGACAAGAACTT GGGGC TTG GTTCC TTTTTTAACAACTCT TERM 1534 1270407 - 1270427 + r 80 -10.5 -3.09987 | CACATTACCACCTGT TCGACTGGA GAA TCTAGTCGA TTAGCTCCCTCTTAG spr1275 1271164 - 1270613 - | hypothetical protein nadE 1272235 - 1271411 - | NAD synthetase spr1277 1273692 - 1272232 - | nicotinate phosphoribosyltransferase spr1278 1274296 - 1273808 - | hypothetical protein spr1279 1274525 - 1274286 - | transcriptional repressor, putative spr1280 1275608 - 1274880 - | hypothetical protein ABC-NBD 1276346 - 1275624 - | ABC transporter ATP-binding protein TERM 1535 1276647 - 1276609 - R 79 -9.8 -3.21938 | opp_overlap 1276609, overlap 1276616 GTAAAATTTTATTAA CAAAAAACTCTCTACAAC AAA ATAATAGAGAGTTTTCTG CTTATTAATTTTTTT TERM 1536 1276640 - 1276616 - R 82 -4.3 -5.5112 | opp_overlap 1276609, overlap 1276609 TTTATTAACAAAAAA CTCTCTACAAC AAA ATAATAGAGAG TTTTCTGCTTATTAA spr1282 1277576 - 1276851 - | hypothetical protein TERM 1537 1277727 - 1277708 - H 76 -4.4 -5.14563 | opp_overlap 1277722 GGGGCTAGGAAAAAA GTCTTTAA AATC TTAAAAAC GCATAGTATCAGGTA TERM 1538 1277722 - 1277770 + H 79 -10 -3.30635 | gap 1, opp_overlap 1277708 1277727, overlap 1277727 AGTCTTTAAAATCTT AAAAACGCATAGTATCAGGTATT GAAC AAT-CTTGATATTATGCGTTTTA TTGTGGGAAGATTTA TERM 1539 1277765 - 1277727 - H 74 -5.5 -4.7416 | gap 1, opp_overlap 1277722 1277727 TTAAAATCTTAAAAA CGCATAGTATCAGGTATT GAAC AAT-CTTGATATTATGCG TTTTATTGTGGGAAG TERM 1540 1277727 - 1277765 + H 100 -9.9 -4.77165 | gap 1, opp_overlap 1277727, overlap 1277722 TTAAAATCTTAAAAA CGCATAGTATCAGGTATT GAAC AAT-CTTGATATTATGCG TTTTATTGTGGGAAG spr1283 1277743 - 1277910 + | hypothetical protein spr1284 1279469 - 1278165 - | protease TERM 1541 1278390 - 1278421 + g 72 -8.8 -3.50335 | overlap 1278395 AAACTCAACTTGGTC CCCTTCGTTAATGA CGTT TCGTTGACGAATGG TTGCTGTTTGTACCG TERM 1542 1279660 - 1279641 - H 88 -7.2 -5.1417 | overlap 1279642 CTAGAAAAGTAAAAA CCAGTATC CCAA GATACTGA CTCGTAAAAATACAT TERM 1543 1279659 - 1279642 - H 77 -8.5 -3.66876 | overlap 1279641 TAGAAAAGTAAAAAC CAGTATC CCAA GATACTG ACTCGTAAAAATACA spnIR-truncation 1280075 - 1280257 + | Type II restriction endonuclease, uncharacterized, truncation spnIR-truncation 1280441 - 1280632 + | Type II restriction endonuclease, uncharacterized, truncation TERM 1544 1281256 - 1281239 - g 73 -5.5 -4.55849 | overlap 1281241 CAAAAGCTAAAGAAA GAGTAGG TTAT CCTACAC AAAAACCTATTCTGT spnIM 1280629 - 1281807 + | type II DNA modification (methyltransferase TERM 1545 1281851 - 1281876 + T 80 -2.6 -5.59655 | opp_overlap 1281851 AGAAAGAACAAAAAA TGCTCTGAAA CACTGA TTTCAAGGCA TTTTTTGTTAGTTTA TERM 1546 1281876 - 1281851 - T 82 -3.3 -5.74288 | opp_overlap 1281851 AGAAAGAACAAAAAA TGCTCTGAAAC ACTG ATTTCAAGGCA TTTTTTGTTAGTTTA TERM 1547 1282214 - 1282239 + T 84 -3.9 -5.68039 | opp_overlap 1282217, overlap 1282218 GTGCAGAGAGATAAA TATTGGCGGTC TTCG GACTGCCTTTA TTTTTTTATCCATTT TERM 1548 1282218 - 1282235 + T 100 -9.1 -5.27709 | opp_overlap 1282217, overlap 1282214 AGAGAGATAAATATT GGCGGTC TTCG GACTGCC TTTATTTTTTTATCC spr1288 1283326 - 1282334 - | hypothetical protein ABC-N/P 1283480 - 1285240 + | ABC transporter permease/ATP-binding protein TERM 1549 1286105 - 1286084 - gf 93 -10.3 -3.9638 | opp_overlap 1286082, overlap 1286082 TATGAAGATAAAAGA CTCTTTAGA TGCA TCTAAAGAG GGCTTGATGGAAATA ABC-N/P 1285200 - 1286945 + | ABC transporter ATP-binding protein TERM 1550 1287561 - 1287514 - g 76 -4.5 -5.08824 | gap 2, opp_overlap 1287526 1287529, overlap 1287526 GCTCTATTGAAAAAA CACTT--TGAAAAAGCAGGCATT GTAT AATGCCTACTTTTTCTTCAAATG CTCCCTTTAATCCCA spr1291 1286956 - 1287540 + | hypothetical protein TERM 1551 1287547 - 1287526 - f 93 -9.5 -4.62904 | opp_overlap 1287526 1287529, overlap 1287514 AAACACTTTGAAAAA GCAGGCATT GTAT AATGCCTAC TTTTTCTTCAAATGC TERM 1552 1287526 - 1287547 + F 88 -7.3 -5.08601 | opp_overlap 1287514 1287526, overlap 1287529 AAACACTTTGAAAAA GCAGGCATT GTAT AATGCCTAC TTTTTCTTCAAATGC TERM 1553 1287718 - 1287706 - g 85 -2.7 -5.72616 | ATGGATACAAAAAAA CACTT TTC AAATG GATTATATTGTGTGG TERM 1554 1288136 - 1288115 - g 71 -5.1 -4.55697 | AGCGGCAGAAACAAA GGCAATAGA AAAT CCAATTGCC AAGACCAGATACATT spr1292 1287540 - 1288235 + | hypothetical protein TERM 1555 1288501 - 1288525 + G 76 -6.6 -4.35474 | TCCTAAGACATATTT TTTTAATGTC AATAC GACATTAGAA TTATTATTTTATTTG ABC-NBD 1288223 - 1289587 + | ABC transporter ATP-binding protein TERM 1556 1289732 - 1289757 + T 76 -6.3 -4.56702 | opp_overlap 1289735 TATTTATAGTATTAG TAATTTCCATA TCTT TAGGGAAATTA TTTATTTACTTACCA TERM 1557 1289796 - 1289821 + T 88 -6.1 -5.66868 | opp_overlap 1289796 1289799, overlap 1289800 GAGATGAGAGATAAA TATCGGCAGTC TTCG GACTGCCTTTA TTTTTTTACTTAATT TERM 1558 1289800 - 1289817 + T 100 -11.3 -5.25976 | opp_overlap 1289799 1289796, overlap 1289796 TGAGAGATAAATATC GGCAGTC TTCG GACTGCC TTTATTTTTTTACTT TERM 1559 1289995 - 1290036 + T 100 -14.1 -4.57581 | gap 1, opp_overlap 1289995 AAGTCTATTGAAAAA TCTCCAGATTAGTGAACT CACGGAT AGTTC-CTAATCTGGAGA TTTCTTATTTGCACT TERM 1560 1290036 - 1289995 - T 100 -14.1 -4.67011 | gap 1, opp_overlap 1289995 AAGTCTATTGAAAAA TCTCCAGATTAGTGAACT CACGGAT AGTTC-CTAATCTGGAGA TTTCTTATTTGCACT TERM 1561 1290400 - 1290386 - T 93 -10 -4.14243 | opp_overlap 1290386 GAGCTTAGGCTAAAA GAGTCC ACT GGACTC TTTTACTCCGTCCCA TERM 1562 1290386 - 1290400 + T 100 -10 -4.2828 | opp_overlap 1290386 GAGCTTAGGCTAAAA GAGTCC ACT GGACTC TTTTACTCCGTCCCA spr1294 1290836 - 1290375 - | hypothetical protein transposase_G 1291121 - 1290909 - | hypothetical protein spr1296 1291498 - 1291130 - | hypothetical protein TERM 1563 1291457 - 1291435 - GR 83 -10.7 -3.06261 | opp_overlap 1291434 1291433 TTTCAACTGGGAACA TCTCCATCT TTCTC AGATGGAGA CTCTTCCTCAAAAAG spr1297 1291616 - 1291422 - | hypothetical protein TERM 1564 1291806 - 1291773 - R 86 -8.3 -4.82667 | opp_overlap 1291777, overlap 1291777 TCACTATACTAAAAA GAAAGTCCTCATTTC AATA GAAATCACGACTTTC TGATAAATTTATTTT transposase_E 1292136 - 1291786 - | degenerate transposase IS1381-truncation 1292356 - 1292117 - | degenerate transposase (orf1) TERM 1565 1292440 - 1292469 + r 74 -3.5 -5.252 | opp_overlap 1292443, overlap 1292441 1292443 TCATTATATATATCA AAAGACCGCAGTT TGAA AACTACGGTCTAA TTTTTTGTCCAAATG TERM 1566 1292441 - 1292468 + r 70 -7 -3.74397 | opp_overlap 1292443, overlap 1292440 1292443 CATTATATATATCAA AAGACCGCAGTT TGAA AACTACGGTCTA ATTTTTTGTCCAAAT TERM 1567 1292466 - 1292443 - R 100 -11.8 -4.41353 | opp_overlap 1292443 1292441 1292440 TTATATATATCAAAA GACCGCAGTT TGAA AACTACGGTC TAATTTTTTGTCCAA TERM 1568 1292443 - 1292466 + r 81 -9.6 -3.44801 | opp_overlap 1292443, overlap 1292441 1292440 TTATATATATCAAAA GACCGCAGTT TGAA AACTACGGTC TAATTTTTTGTCCAA guaA 1294168 - 1292606 - | bifunctional GMP synthase/glutamine amidotransferase protein TERM 1569 1294629 - 1294617 - g 81 -2.7 -5.60993 | overlap 1294618 TTTCCTACAAAAAAA CCATT CCC AATGA GCAAGAAGTTGCCAA TERM 1570 1294789 - 1294766 - g 81 -5.4 -5.07053 | AAGGACTTTAAAAAA GAAGAAATCA CCAG TCATTTCTTC CAAACCTTGCAAAAA spr1301 1294301 - 1295008 + | hypothetical protein TERM 1571 1295022 - 1295046 + T 93 -5.7 -5.98675 | opp_overlap 1295024, overlap 1295024 AGATTACCACGCAAA AACTCTCTGTC ACG GACAAAGAGTC TTTTTTATTTTTCTA TERM 1572 1295044 - 1295024 - T 100 -10.5 -4.68994 | opp_overlap 1295022 1295024 ATTACCACGCAAAAA CTCTCTGTC ACG GACAAAGAG TCTTTTTTATTTTTC TERM 1573 1295024 - 1295044 + T 84 -8.3 -4.585 | opp_overlap 1295024, overlap 1295022 ATTACCACGCAAAAA CTCTCTGTC ACG GACAAAGAG TCTTTTTTATTTTTC spr1302 1296007 - 1295051 - | hypothetical protein spr1303 1296894 - 1295956 - | hypothetical protein cppA 1297631 - 1296891 - | C3-degrading proteinase spr1305 1298335 - 1297700 - | hypothetical protein spr1306 1299164 - 1298337 - | Cof family protein spr1307 1299521 - 1299186 - | hypothetical protein spr1308 1300034 - 1299522 - | hypothetical protein spr1309 1300224 - 1300439 + | hypothetical protein def 1300763 - 1301374 + | peptide deformylase TERM 1574 1301381 - 1301398 + F 74 -5.5 -4.75289 | opp_overlap 1301381 1301376 1301382, overlap 1301382 CTTGAATAAAGAAAA TCCCGTT GCAA GACGGGG TTTTGTGTTATAATA TERM 1575 1301520 - 1301491 - g 71 -5.1 -4.56113 | gap 1, overlap 1301492 1301493 AATACAGGAAACAAA CTCTACCTCCAAGA AGA TCTCCGAGGTA-AG AATGTTGAGAAAGTC TERM 1576 1301579 - 1301559 - g 70 -5.4 -4.38744 | overlap 1301561 AGCTACAGAAAAGAA GGTGTCCA TTTCT TGGACATC AAAAAAATCTCTCTC TERM 1577 1301599 - 1301587 - g 83 -3.4 -5.58454 | overlap 1301589 TGGACATCAAAAAAA TCTC TCTCT GAGA TGACTGAAGGTGCTG trmH 1301386 - 1302147 + | tRNA (guanosine-2'-O-)-methyltransferase TERM 1578 1302152 - 1302175 + T 100 -10.4 -5.37345 | opp_overlap 1302152 ATAGACTATAAAAAA GTTTCCAGTC ATCT GATTGGAAAC TTTTTTATGATTAAC TERM 1579 1302175 - 1302152 - T 90 -8.2 -5.35459 | opp_overlap 1302152 ATAGACTATAAAAAA GTTTCCAGTC ATCT GATTGGAAAC TTTTTTATGATTAAC trxB 1303097 - 1302186 - | thioredoxin reductase spr1313 1303399 - 1303163 - | hypothetical protein TERM 1580 1303412 - 1303455 + r 83 -10.6 -3.22886 | gap 1, opp_overlap 1303418 1303423, overlap 1303418 1303423 CATTTCTATCTTTTT TAAAGAGTAAACTCAGCTAGT CCA ACTAACTGAGTTTTC-CTTTA TCTATTATATCAAAT TERM 1581 1303450 - 1303418 - R 93 -12.9 -3.34715 | opp_overlap 1303412 1303418 1303423, overlap 1303423 TATCTTTTTTAAAGA GTAAACTCAGCTAGT CCA ACTAACTGAGTTTTC CTTTATCTATTATAT TERM 1582 1303418 - 1303450 + r 83 -10.7 -3.14751 | opp_overlap 1303418 1303423, overlap 1303412 1303423 TATCTTTTTTAAAGA GTAAACTCAGCTAGT CCA ACTAACTGAGTTTTC CTTTATCTATTATAT TERM 1583 1303445 - 1303423 - R 93 -11.4 -4.00532 | opp_overlap 1303418 1303412 1303423, overlap 1303418 TTTTTAAAGAGTAAA CTCAGCTAGT CCA ACTAACTGAG TTTTCCTTTATCTAT TERM 1584 1303423 - 1303445 + r 100 -9.2 -4.66057 | opp_overlap 1303423 1303418, overlap 1303418 1303412 TTTTTAAAGAGTAAA CTCAGCTAGT CCA ACTAACTGAG TTTTCCTTTATCTAT ABC-NDB 1304208 - 1303465 - | amino acid ABC transporter ATP-binding protein ABC-MSP 1305008 - 1304208 - | amino acid ABC transporter permease TERM 1585 1305164 - 1305138 - R 76 -9.7 -2.95388 | opp_overlap 1305137 1305134 CAGGGAAGTTATATA TTTTATCTATC AAAGA GATAGATAAAA ACTATTTCAGTCCCA spr1316 1305522 - 1305166 - | hypothetical protein ogt 1306046 - 1305516 - | methylated-DNA--protein-cysteine S-methyltransferase spr1318 1306540 - 1306046 - | hypothetical protein spr1319 1306669 - 1307121 + | hypothetical protein spr1320 1307118 - 1307765 + | hemolysin TERM 1586 1307770 - 1307790 + T 86 -5.5 -5.63517 | opp_overlap 1307770 ATTACATGTAAAAAA GTTGAGA AATTCAA TCTCAAC TTTTTTCTTTACACA TERM 1587 1307790 - 1307770 - T 79 -5.5 -5.13473 | opp_overlap 1307770 ATTACATGTAAAAAA GTTGAGA AATTCAA TCTCAAC TTTTTTCTTTACACA spr1321 1308367 - 1307786 - | glutamine amidotransferase subunit PdxT pdx1 1309261 - 1308368 - | pyridoxine biosynthesis protein TERM 1588 1309141 - 1309125 - G 73 -10.1 -2.80994 | opp_overlap 1309125 TCCAAGGCCATCACA GCTGCCG CAC CAGCAGC TTCTGCGATACGAGC TERM 1589 1309193 - 1309211 + g 82 -3.9 -5.38326 | gap 1 CATAATAACACCACC CTTGAGCA TCTG TGC-CAAG TTTTTATTTAGTTCA TERM 1590 1309354 - 1309384 + r 77 -9.8 -3.0089 | opp_overlap 1309355, overlap 1309351 ACAGATTAGCTAAAA ACTATCTGACCTTA ACT TAAGGCCAGATAGC TCATTCATTTTTATT TERM 1591 1309383 - 1309355 - R 100 -15.5 -4.69664 | opp_overlap 1309354 1309351 CAGATTAGCTAAAAA CTATCTGACCTTA ACT TAAGGCCAGATAG CTCATTCATTTTTAT nox 1310774 - 1309395 - | NADH oxidase TERM 1592 1311178 - 1311158 - g 71 -4.8 -4.56775 | overlap 1311160 ATCTTTCTCCAAAAA TCCTTTGA CTTGC TCAAAGAA CTTGAATACCGCTTC apbE 1311068 - 1311991 + | thiamine biosynthesis protein ApbE, putative TERM 1593 1312608 - 1312594 - g 84 -10 -3.94811 | opp_overlap 1312592 AAGATTACTGAGAAA TTGCGC AAT GCGCAA GAATTGCTTCGCAAA spr1325 1312051 - 1312656 + | hypothetical protein spr1326 1312674 - 1313918 + | oxidoreductase, putative TERM 1594 1313931 - 1313947 + T 100 -10.9 -5.00616 | TAATGATAGTTTTTA GGAACCA TTA TGGTTCC TTTTTTAGCGAAAAA TERM 1595 1313988 - 1313964 - T 84 -6.5 -5.08824 | opp_overlap 1313962 1313964 TTTTTAGCGAAAAAA GACTAGCAA ACACAAA CTGCTAGTC TCTTTGTTATCGTTT spr1327 1314292 - 1314035 - | hypothetical protein glyS 1316370 - 1314334 - | glycyl-tRNA synthetase subunit beta TERM 1596 1316255 - 1316282 + g 83 -6.2 -5.07053 | opp_overlap 1316256, overlap 1316256 ATGGCTTCAAAAGAC AGGCGGTTTTCC TTGA GGAAGGCTGCCA TTTTTTCGCCTAGTT TERM 1597 1316256 - 1316281 + g 79 -9.7 -3.63148 | opp_overlap 1316256, overlap 1316255 TGGCTTCAAAAGACA GGCGGTTTTCC TTGA GGAAGGCTGCC ATTTTTTCGCCTAGT glyQ 1317547 - 1316630 - | glycyl-tRNA synthetase subunit alpha spr1330 1318130 - 1317741 - | hypothetical protein spr1331 1318519 - 1318112 - | hypothetical protein TERM 1598 1318417 - 1318407 - G 74 -4 -5.02074 | opp_overlap 1318396 1318392 1318407 TCATTCTTTAAAAAA GATT GAT AATC TTTCAACTTTTCAGT TERM 1599 1318598 - 1318542 - R 82 -7.5 -4.56736 | gap 2, opp_overlap 1318555, overlap 1318550 ACTGAATAAGCAAAA GAACCACA-T-CTGACAATCCTAGGTT GATTT AACCTAGGGGCGTCAGAAACGCGGTTC CACCCTAATTTATTA TERM 1600 1318588 - 1318550 - R 83 -11.1 -3.11158 | opp_overlap 1318555, overlap 1318542 AGCAAAAGAACCACA TCTGACAATCCTAGGTT GATTT AACCTAGGGGCGTCAGA AACGCGGTTCCACCC spr1332 1319616 - 1318774 - | hypothetical protein TERM 1601 1318807 - 1318823 + g 81 -6.6 -4.72486 | opp_overlap 1318795 AACTCGTGGAGCACC CGATTG AACAG CAATCG TTTTTAAGGTTTCTC TERM 1602 1319718 - 1319691 - R 84 -6.4 -5.02476 | opp_overlap 1319694 ATATTCTGTAAAAAA TAAGTCTGTCAA ATAT CTAACAGACCTA TTTTTTCTTGCTTAT pgdA 1321121 - 1319730 - | peptidoglycan GlcNAc deacetylase spr1334 1321601 - 1321356 - | hypothetical protein mocA 1321864 - 1322925 + | oxidoreductase TERM 1603 1323294 - 1323265 - g 76 -10.8 -2.60776 | opp_overlap 1323264 1323265, overlap 1323264 1323263 AACGTCTTAAAAAGG GGCCAGAAATTC TGATTG GAACTCCTGGCC GTATCTTTGAACTCA TERM 1604 1323357 - 1323325 - g 80 -2 -5.58209 | opp_overlap 1323348 1323349, overlap 1323326 1323329 1323347 1323349 TTAAACTTAAAAAAA TCAAGATGATGAAT GTGGA AACCATCATCCTGG ATGAATTTGACCAAT DEAD/H 1322922 - 1324004 + | DEAD RNA helicase TERM 1605 1324014 - 1324040 + T 100 -11.7 -5.24531 | opp_overlap 1324026 AAATAAAGCCCCATT GCTCTATACAC ATCCA GTGTATGGAGC TTTTTTATAAGCAAT transposase_D 1324229 - 1324068 - | degenerate transposase transposase_D 1324579 - 1324163 - | degenerate transposase TERM 1606 1324664 - 1324696 + r 100 -10 -4.76874 | overlap 1324659 ATTAATTTATCCGAA GGATTTAGTTCTGT ATTGC ACAGGGCTAAGTCC TTTTAGTTTTATCTT IS861-truncation 1325143 - 1324655 - | degenerate transposase (orf2) IS861-truncation 1325487 - 1325119 - | degenerate transposase (orf2) IS861-truncation 1325982 - 1325713 - | degenerate transposase (orf1) TERM 1607 1325974 - 1325934 - G 100 -17.2 -5.19328 | opp_overlap 1325931 ATTTCATAATAAAAA CACCCCAAAAGTTAGA TTTTTTCTG TCTAACTTTTGGGGTG CAGTTCACTTGTCTT transposase_C 1326317 - 1325979 - | degenerate transposase TERM 1608 1326678 - 1326690 + r 71 -7.7 -3.58905 | GTCGTATAGATGTTA CTGAC TTC GTCAG TTCTATCTACAACCT TERM 1609 1326916 - 1326896 - R 100 -10.5 -5.52909 | opp_overlap 1326896 CAATATCTAAAAAAA GAACCTTGC CAA GCAAGATTC TTTTAGTGTCTAACT TERM 1610 1326896 - 1326916 + r 83 -8.3 -4.39568 | opp_overlap 1326896 CAATATCTAAAAAAA GAACCTTGC CAA GCAAGATTC TTTTAGTGTCTAACT tuf 1328160 - 1326964 - | elongation factor Tu TERM 1611 1329037 - 1329015 - R 100 -9.2 -5.25735 | opp_overlap 1329015 CTAAAAAATCAAAAA GAGAGAACCA GTC TGATCCTCTC TTACTTATAGATGGT glpF 1329951 - 1329082 - | glycerol uptake facilitator protein, putative TERM 1612 1329517 - 1329540 + g 74 -6 -4.40804 | opp_overlap 1329507, overlap 1329521 ATTAATCAAACCATT GACAGTTGCT GCAT AGCGACTTTC TTTTGTACCATGGTC TERM 1613 1329521 - 1329536 + g 75 -5.4 -4.77775 | overlap 1329517 ATCAAACCATTGACA GTTGCT GCAT AGCGAC TTTCTTTTGTACCAT TERM 1614 1330154 - 1330119 - R 82 -8.5 -4.07687 | gap 2, opp_overlap 1330119 1330130 1330151, overlap 1330105 1330130 ACCTCGTTCTCAAAA CCAGGAAAAAAGCCCAC ATCT GTGAGCTT-TT-CCTGG TTCCTAGATTCTAAA TERM 1615 1330145 - 1330130 - R 85 -6.8 -5.25656 | opp_overlap 1330119 1330130, overlap 1330119 AAAACCAGGAAAAAA GCCCAC ATCT GTGAGC TTTTCCTGGTTCCTA spr1345 1330783 - 1330175 - | cell wall surface anchor family protein spr1346 1331853 - 1330741 - | hypothetical protein TERM 1616 1331158 - 1331181 + gr 86 -4.6 -5.4251 | overlap 1331159 AGTATAATATTTTCC GTCAGTAGTA GTCA TGCTACTGAG TTTTTTATCTGTGAC TERM 1617 1331159 - 1331180 + gr 75 -8.1 -3.84422 | overlap 1331158 GTATAATATTTTCCG TCAGTAGTA GTCA TGCTACTGA GTTTTTTATCTGTGA spr1347 1332212 - 1331958 - | hypothetical protein spr1348 1332448 - 1332206 - | hypothetical protein transposase_B 1332869 - 1332570 - | degenerate transposase transposase_A 1333304 - 1333089 - | degenerative transposase pgm 1333648 - 1335366 + | phosphoglucomutase bta 1335477 - 1335824 + | bacterocin transport accessory protein TERM 1618 1335853 - 1335899 + T 75 -8.4 -3.71848 | gap 1, opp_overlap 1335858, overlap 1335858 AAGTCTTAAAATCAC AAAAACGCATAATGT-AAGGT GCAAAA ACCTTGATATTATGCGTTTTA TTGTTCCTAAAACAG TERM 1619 1335858 - 1335894 + T 90 -8.3 -4.92757 | gap 1, opp_overlap 1335858, overlap 1335853 TTAAAATCACAAAAA CGCATAATGT-AAGGT GCAAAA ACCTTGATATTATGCG TTTTATTGTTCCTAA TERM 1620 1335894 - 1335858 - T 83 -6.1 -5.09245 | gap 1, opp_overlap 1335858 1335853 TTAAAATCACAAAAA CGCATAATGT-AAGGT GCAAAA ACCTTGATATTATGCG TTTTATTGTTCCTAA TERM 1621 1336083 - 1336059 - T 100 -9.4 -6.00086 | opp_overlap 1336059, overlap 1336080 AGATTACAAAAAAAA CTACGTTTTG CTAAT CAAAACGCAG TTTCAGCCACTATTT glnH 1336939 - 1336103 - | amino acid ABC transporter amino acid-binding protein glnQ 1337581 - 1336952 - | amino acid ABC transporter ATP-binding protein glnP 1338289 - 1337591 - | amino acid ABC transporter permease TERM 1622 1337676 - 1337665 - G 75 -5.8 -4.67692 | overlap 1337667 TCAAAATCAAATAAA TGGC TCCT GCCA AGAACATAGGAACTA TERM 1623 1338012 - 1337998 - G 72 -8.6 -3.51232 | GGCGGTCTAAACGAA TCCCAA TAC TTGGGA GCACATAATAGATAA spr1356 1339622 - 1338378 - | TPR domain protein TERM 1624 1338499 - 1338513 + gr 75 -8.6 -3.52093 | AGATAGATATAGTGT TCCAGA AAT TCTGGA TTGTCCTTCAAATCT spr1357 1340763 - 1339597 - | hypothetical protein TERM 1625 1340589 - 1340573 - GH 77 -6.5 -4.53119 | AAATAATATAACAAA CCAGACA AAA TGACTGG CAACATCACAACTGC spr1358 1340907 - 1341920 + | hypothetical protein TERM 1626 1341935 - 1341957 + T 93 -7.1 -5.58179 | opp_overlap 1341935 AAACACCATAAAAAA TGAACTTGG TATTT TCAAGTTCA TTTTTTCTTATAGTC TERM 1627 1341957 - 1341935 - T 85 -6.4 -5.38321 | opp_overlap 1341935 AAACACCATAAAAAA TGAACTTG GTATTTT CAAGTTCA TTTTTTCTTATAGTC atpC 1342384 - 1341965 - | F0F1 ATP synthase subunit epsilon atpD 1343801 - 1342395 - | F0F1 ATP synthase subunit beta TERM 1628 1343465 - 1343477 + g 74 -9.1 -3.48276 | overlap 1343462 TTTTATGAATTGGCT GACGC TCT GCGTC TTCTGTAAAAGGAGC TERM 1629 1343766 - 1343756 - G 70 -3.2 -4.86731 | CTGCTGCAAACAAAA CGTC TAC AACG GGACCGATAACCTGA atpG 1344765 - 1343887 - | F0F1 ATP synthase subunit gamma TERM 1630 1344633 - 1344609 - G 79 -8.6 -4.10657 | GGATATCTGTCAAAA GTTTACGCAC TTTCT GAGCGTAAAC TTGGAAGTTGCGAGC atpA 1346286 - 1344781 - | F0F1 ATP synthase subunit alpha TERM 1631 1345711 - 1345725 + g 74 -4.3 -4.86621 | opp_overlap 1345711 1345718, overlap 1345718 CGCGACGTAGATACA GATCA TATCT TGATC TTTTTGGTTCAAGAT TERM 1632 1345895 - 1345881 - G 77 -10 -3.30243 | opp_overlap 1345881 1345880 1345883, overlap 1345886 ACTTACGTTGCATAA CACCAG GAG CTGGTG CTTCTACTGGACGAG TERM 1633 1345881 - 1345895 + g 72 -10 -2.64099 | opp_overlap 1345881 1345886, overlap 1345880 1345883 ACTTACGTTGCATAA CACCAG GAG CTGGTG CTTCTACTGGACGAG atpH 1346837 - 1346301 - | F0F1 ATP synthase subunit delta atpF 1347331 - 1346837 - | F0F1 ATP synthase subunit B atpB 1348061 - 1347345 - | F0F1 ATP synthase subunit A atpE 1348296 - 1348096 - | F0F1 ATP synthase subunit C IS1239 1349378 - 1348371 - | transposase TERM 1634 1349579 - 1349560 - R 83 -7.9 -4.76274 | opp_overlap 1349560 GAAAGCAACACAAAA TCCGAGA GGGGAA TCTCGGA TTAATAGATAGAGAG spr1368 1350305 - 1349823 - | hypothetical protein TERM 1635 1350390 - 1350408 + r 78 -10.4 -2.61383 | overlap 1350389 ACTAGCCGCAGGTTG CTCAAAAC ACT GTTTTGAG GTTGTAGATGAAACT TERM 1636 1350435 - 1350453 + r 78 -10.4 -2.61383 | opp_overlap 1350434, overlap 1350434 AACTGACGAAGTTAG CTCAAAAC ACT GTTTTGAG GTTGTAGATGAAACT TERM 1637 1350479 - 1350467 - R 73 -7.7 -3.83205 | AGGTTGTAGATGAAA CTGAC GAA GTCAG CTCAAAACATAGTTT TERM 1638 1350480 - 1350498 + r 78 -10.4 -2.61383 | opp_overlap 1350479, overlap 1350479 AACTGACGAAGTCAG CTCAAAAC ATA GTTTTGAG GTTGTAGATGAAACT TERM 1639 1350525 - 1350543 + r 78 -10.4 -2.61383 | opp_overlap 1350524, overlap 1350524 AACTGACGAAGTTAG CTCAAAAC ACT GTTTTGAG GTTGTAGATGAAACT TERM 1640 1350569 - 1350557 - R 73 -7.7 -3.83205 | AGGTTGTAGATGAAA CTGAC GAA GTCAG CTCAAAACATAGTTT TERM 1641 1350570 - 1350588 + r 78 -10.4 -2.61383 | opp_overlap 1350569, overlap 1350569 AACTGACGAAGTCAG CTCAAAAC ATA GTTTTGAG GTTGTAGATGAAACT TERM 1642 1350615 - 1350633 + r 78 -10.4 -2.61383 | opp_overlap 1350614, overlap 1350614 AACTGACGAAGTTAG CTCAAAAC ACT GTTTTGAG GTTGTAAATGAAACT TERM 1643 1350659 - 1350647 - R 76 -7.7 -4.06055 | AGGTTGTAAATGAAA CTGAC AAA GTCAG TAACCATACATACGG TERM 1644 1350731 - 1350762 + r 80 -5.1 -5.36364 | gap 1, opp_overlap 1350731 AGCAAAATGGAAAAA GGAGTGAGTGAAGC ACATC GCCTC-CCCACTCC TTTTTCTGTTTTTAG TERM 1645 1350762 - 1350731 - R 100 -10.2 -4.88222 | gap 1, opp_overlap 1350731 AGCAAAATGGAAAAA GGAGTGAGTGAAGCA CAT CGCCTC-CCCACTCC TTTTTCTGTTTTTAG greA 1351265 - 1350774 - | transcription elongation factor GreA TERM 1646 1350872 - 1350883 + g 73 -7.2 -4.06055 | TGCCAATCAAGGCCT GCCC AATT GGGC TTTCATTTGAAACCT TERM 1647 1351033 - 1351045 + g 79 -3.3 -5.38054 | TCGCTATTGACGATT TCAGC ATA GCGGA TTTTTGTTTCTAAGC TERM 1648 1351233 - 1351243 + g 78 -4 -5.28826 | CTTTTCCTCAAGGGT CATA GGA TATG TTTTTTCTGCCATTT TERM 1649 1351320 - 1351291 - R 73 -8.1 -3.57883 | opp_overlap 1351282 1351291 1351296, overlap 1351282 1351296 ATAATATTTTCTAAA GAAAATTATGTGA AGTA TCACATAATTTTA GTTTGTTTAGTTTAA TERM 1650 1351291 - 1351320 + r 72 -8.1 -3.36578 | opp_overlap 1351282 1351291 1351296, overlap 1351282 1351296 ATAATATTTTCTAAA GAAAATTATGTGA AGTA TCACATAATTTTA GTTTGTTTAGTTTAA TERM 1651 1351296 - 1351315 + r 86 -8 -4.72863 | opp_overlap 1351296 1351291, overlap 1351291 ATTTTCTAAAGAAAA TTATGTGA AGTA TCACATAA TTTTAGTTTGTTTAG TERM 1652 1351315 - 1351296 - R 90 -8 -4.87133 | opp_overlap 1351291 1351296, overlap 1351291 ATTTTCTAAAGAAAA TTATGTGA AGTA TCACATAA TTTTAGTTTGTTTAG spr1370 1352982 - 1351327 - | hypothetical protein spr1371 1353557 - 1353063 - | hypothetical protein spr1372 1354018 - 1353554 - | hypothetical protein TERM 1653 1353904 - 1353874 - G 70 -8.5 -3.35996 | gap 1, opp_overlap 1353879, overlap 1353878 1353879 CATCCCTAGCTAGAA GAAAGGTATCCGCA CACT TACGGATA-CTTTC TTCTAAAATATGGGA TERM 1654 1353901 - 1353878 - G 74 -6 -4.33417 | opp_overlap 1353879, overlap 1353874 1353879 CCTAGCTAGAAGAAA GGTATCCGCA CACT TACGGATACT TTCTTCTAAAATATG TERM 1655 1353879 - 1353900 + g 78 -7.3 -4.32579 | opp_overlap 1353878 1353874 1353879 CTAGCTAGAAGAAAG GTATCCGCA CACT TACGGATAC TTTCTTCTAAAATAT TERM 1656 1353900 - 1353879 - G 73 -9.5 -3.19568 | opp_overlap 1353879, overlap 1353878 1353874 CTAGCTAGAAGAAAG GTATCCGCA CACT TACGGATAC TTTCTTCTAAAATAT murC 1355362 - 1354028 - | UDP-N-acetylmuramate--L-alanine ligase TERM 1657 1354152 - 1354182 + g 80 -6.2 -4.68384 | AGTGGAGAAACATTT TCAACAGTAATCAC TTG GTGTTTTTTGTTGA TTTTGTTGGCTAGGT spr1374 1355990 - 1355373 - | hypothetical protein snf 1359136 - 1356038 - | Snf2 family protein TERM 1658 1357947 - 1357917 - G 70 -7.7 -3.65199 | opp_overlap 1357925 AAGCCCGCAGCCAAA CAGACTTGGAAAA TTCTT TCTTCTAAGTCTG CGTCACTTGAAAAGG TERM 1659 1358830 - 1358844 + g 79 -10 -3.54307 | opp_overlap 1358822 1358823 CCAAAAACTTGCCAC CCAAGG TCA CCTTGG TTTCAACGGCCTCTT TERM 1660 1359187 - 1359225 + r 77 -6.1 -4.70879 | gap 1, opp_overlap 1359171 1359189 1359191, overlap 1359188 1359191 ATTTTCGCCTATGAA AATAGCCTTCTAGGAAGA CTTT TCT-CCTAGAAGGCTGGA TTTTTAACATTTGGC TERM 1661 1359188 - 1359224 + r 81 -9.6 -3.41804 | gap 1, opp_overlap 1359171 1359189 1359191, overlap 1359187 1359191 TTTTCGCCTATGAAA ATAGCCTTCTAGGAAGA CTTT TCT-CCTAGAAGGCTGG ATTTTTAACATTTGG TERM 1662 1359223 - 1359189 - R 100 -10.9 -4.25104 | gap 1, opp_overlap 1359188 1359187 1359191, overlap 1359171 1359191 TTTCGCCTATGAAAA TAGCCTTCTAGGAAGA CTTT TCT-CCTAGAAGGCTG GATTTTTAACATTTG TERM 1663 1359191 - 1359221 + r 89 -13.5 -2.85019 | gap 1, opp_overlap 1359191 1359189, overlap 1359188 1359187 TCGCCTATGAAAATA GCCTTCTAGGAAGA CTTT TCT-CCTAGAAGGC TGGATTTTTAACATT TERM 1664 1359221 - 1359191 - R 100 -13.5 -3.73042 | gap 1, opp_overlap 1359188 1359187 1359191, overlap 1359189 TCGCCTATGAAAATA GCCTTCTAGGAAGA CTTT TCT-CCTAGAAGGC TGGATTTTTAACATT patB 1360395 - 1359229 - | aminotransferase, class II metB 1361497 - 1360403 - | cystathionine gamma-synthase TERM 1665 1361615 - 1361597 - R 71 -3.1 -5.06585 | opp_overlap 1361597 CAAACTATATAAAAA GGGAG TTTTTCCTG CTCCC TTTAATAGACTATAA ABC-MSP-truncation 1361807 - 1361655 - | ABC transporter, truncation ABC-MSP-truncation 1362378 - 1361926 - | ABC transporter, truncation ABC-MSP-truncation 1363026 - 1362403 - | ABC transporter, truncation ABC-MSP-truncation 1363338 - 1363036 - | ABC transporter, truncation TERM 1666 1363462 - 1363424 - R 77 -6.1 -4.77165 | opp_overlap 1363424, overlap 1363419 CTTCCTATAACAAAA CGCATAACATCTAGGAT TTTAT ATACCTGATATTATGCG TTTTTAAGCACAAAG aliB 1365468 - 1363510 - | ABC transporter substrate-binding protein - oligopeptide transport PST_transporter 1367293 - 1365671 - | polysaccharide biosynthesis protein TERM 1667 1368321 - 1368342 + G 72 -9.5 -3.02511 | gap 1 TTGCTGCTGGACTTG CTTGTCTCCG TCT CGGAG-CAAG TCTTGAGGACATCAA murE 1367399 - 1368844 + | UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase TERM 1668 1368848 - 1368889 + T 79 -8.4 -4.00042 | gap 1, opp_overlap 1368848 1368857, overlap 1368857 1368881 AATTATTTATAAGAA TA-GAAAAAATCAAGGG AAAATGAAA CCCTTGATTTTTTCCTA TTATTTAGTAAAAAC TERM 1669 1368889 - 1368848 - T 75 -8.4 -3.83226 | gap 1, opp_overlap 1368848 1368857 1368881, overlap 1368857 AATTATTTATAAGAA TA-GAAAAAATCAAGGG AAAATGAAA CCCTTGATTTTTTCCTA TTATTTAGTAAAAAC TERM 1670 1368857 - 1368879 + T 80 -4.9 -5.31545 | opp_overlap 1368857 1368848, overlap 1368848 TAAGAATAGAAAAAA TCAAGGG AAAATGAAA CCCTTGA TTTTTTCCTATTATT TERM 1671 1368879 - 1368857 - T 83 -4.9 -5.55695 | opp_overlap 1368848 1368857, overlap 1368848 TAAGAATAGAAAAAA TCAAGGG AAAATGAAA CCCTTGA TTTTTTCCTATTATT spr1385 1369084 - 1368890 - | hypothetical protein spr1386 1369469 - 1369185 - | hypothetical protein spr1387 1369780 - 1369466 - | hypothetical protein spr1388 1370329 - 1369817 - | hypothetical protein TERM 1672 1370363 - 1370350 - R 85 -4.5 -5.61596 | opp_overlap 1370350, overlap 1370354 ACTCCTAGAAAAAAA GGAGC CGAA ACTCC TTTCGATATAAGGCA ppaC 1371351 - 1370416 - | putative manganese-dependent inorganic pyrophosphatase TERM 1673 1370535 - 1370555 + g 79 -8.3 -4.02534 | CTTCGACCTTGTCCA TATTGGCAC CAA GAGCCAATA TTTCTGAGTTTGAGT TERM 1674 1371435 - 1371416 - R 79 -10 -3.32997 | TTTTGACAAAGGTAA GAGGAGTC AAAG GACTCCCC ACGATTCTTCAAAAT spr1390 1371721 - 1371422 - | hypothetical protein spr1391 1372460 - 1371711 - | hypothetical protein spr1392 1372900 - 1372514 - | hypothetical protein spr1393 1374275 - 1372875 - | Cof family protein/peptidyl-prolyl cis-trans isomerase, cyclophilin type TERM 1675 1373010 - 1373000 - GR 81 -6.8 -4.77157 | CTAACTGACCAAAAA CCGT GTG ACGG CGGTCTAGGTGAGGT TERM 1676 1374490 - 1374521 + r 86 -8 -4.67697 | opp_overlap 1374499, overlap 1374499 CTCATTTCAAAGCTT GTGAAAAAAGACCC GTTG GGGTCTTAATTCGC TTTCTTGTTTTCAAG TERM 1677 1374499 - 1374512 + r 72 -8.1 -3.44891 | opp_overlap 1374499, overlap 1374490 AAGCTTGTGAAAAAA GACCC GTTG GGGTC TTAATTCGCTTTCTT TERM 1678 1374512 - 1374499 - R 90 -8.1 -5.01732 | opp_overlap 1374499 1374490 AAGCTTGTGAAAAAA GACCC GTTG GGGTC TTAATTCGCTTTCTT TERM 1679 1374565 - 1374548 - R 74 -5.5 -4.74801 | opp_overlap 1374550, overlap 1374550 CAAGCTCATGAAAAA GAGACCC AACC GGGTCTT TTCTTTAATCTTCGT TERM 1680 1374550 - 1374563 + r 90 -8.1 -4.99568 | opp_overlap 1374550 1374548 AGCTCATGAAAAAGA GACCC AACC GGGTC TTTTCTTTAATCTTC TERM 1681 1374563 - 1374550 - R 79 -8.1 -3.98658 | opp_overlap 1374550, overlap 1374548 AGCTCATGAAAAAGA GACCC AACC GGGTC TTTTCTTTAATCTTC rpsR 1374809 - 1374570 - | 30S ribosomal protein S18 ssbA 1375311 - 1374841 - | single-strand DNA-binding protein rpsF 1375613 - 1375323 - | 30S ribosomal protein S6 TERM 1682 1375725 - 1375704 - R 74 -3.1 -5.34555 | overlap 1375706 TTATACTAGAAAAAA TTTTTTTAC GCAA GTAAAAACA CTAGAATTCGAAAAA TERM 1683 1375754 - 1375742 - R 83 -6.2 -5.11033 | opp_overlap 1375737 1375742 TAGAATTCGAAAAAA CGCC ACATG GGCG TTTTCCTGTTCTTAT TERM 1684 1375742 - 1375754 + r 74 -6.2 -4.50841 | opp_overlap 1375742, overlap 1375737 TAGAATTCGAAAAAA CGCC ACATG GGCG TTTTCCTGTTCTTAT asnC 1377109 - 1375766 - | asparaginyl-tRNA synthetase spr1398 1377499 - 1377128 - | hypothetical protein aspB 1378673 - 1377486 - | aspartate aminotransferase spr1400 1379158 - 1378670 - | hypothetical protein TERM 1685 1378735 - 1378725 - G 81 -5.4 -5.00895 | TCTACTAGATAAAAA TCAG ATC CTGA CTTAACTTCCCAGAT TERM 1686 1378894 - 1378912 + g 85 -8.9 -4.15044 | opp_overlap 1378896 CTTTACCAATCAGGA CAGCAAG CGCTT CTTGCTG TTTATTACGACCAAG spr1401 1379194 - 1379388 + | hypothetical protein spr1402 1379398 - 1380027 + | hypothetical protein TERM 1687 1380064 - 1380081 + T 100 -9.1 -5.38958 | opp_overlap 1380064 TCTAAATCAATTATA GCCACCT AATA GGGTGGC TTTTTATTTCTCAAT TERM 1688 1380134 - 1380155 + T 89 -8.7 -4.62904 | opp_overlap 1380134 GCCATCCAAAAAAAA CCTTGAGCG TTAC CACTCAAGG TTTTTAGCAGTCTTT TERM 1689 1380155 - 1380134 - T 100 -10.9 -5.81412 | opp_overlap 1380134 GCCATCCAAAAAAAA CCTTGAGCG TTAC CACTCAAGG TTTTTAGCAGTCTTT spr1403 1387920 - 1380265 - | hypothetical protein TERM 1690 1380468 - 1380486 + g 77 -9.6 -3.52073 | overlap 1380459 1380456 GTTCTGGAACCGCTG GTACTGGT TTA ACCGGTAC TTCTGGTGTTGAAAC TERM 1691 1380515 - 1380541 + g 86 -10.2 -3.97209 | ACAGCTGGAGTTGGT TGTACTGGCACT TCT GGTGTCGGTACA TTTGGTGTTGGTTGC TERM 1692 1383796 - 1383820 + g 73 -5.7 -4.57341 | TGGACGACCTTCTAC TGGTGTAATTG TTA CTAATACACCA TTTTTAACAGCAATT TERM 1693 1387730 - 1387754 + g 83 -7.2 -4.73617 | GTAGCTGCTTCTCCC CTACCAACAG AAATA CTATTGGTAG TTTCTTGTTTGTTTT spr1404 1388112 - 1389620 + | hypothetical protein TERM 1694 1389628 - 1389657 + T 75 -8.7 -3.40389 | opp_overlap 1389633, overlap 1389633 CTTTATAAGTTATCA AAAAAGTCAGCAT AATC GTGCTGACTTTTC TCTTATCTGATTTCT TERM 1695 1389652 - 1389633 - T 88 -7.9 -5.18357 | opp_overlap 1389628 1389633 TAAGTTATCAAAAAA GTCAGCA TAATCG TGCTGAC TTTTCTCTTATCTGA TERM 1696 1389633 - 1389652 + T 93 -8.6 -4.76963 | opp_overlap 1389633, overlap 1389628 TAAGTTATCAAAAAA GTCAGCAT AATC GTGCTGAC TTTTCTCTTATCTGA spr1405 1390399 - 1389671 - | hypothetical protein TERM 1697 1390477 - 1390443 - R 87 -13 -2.78354 | opp_overlap 1390444 1390446 1390452, overlap 1390452 CAACCAAGAAATTCA TTTGAAAAACCTCGGT TTG ACCGAGGTTTTTCTAT TTATTTGGGCCATCC TERM 1698 1390444 - 1390476 + r 100 -16.5 -4.42062 | opp_overlap 1390443 1390452, overlap 1390446 1390452 AACCAAGAAATTCAT TTGAAAAACCTCGGT TTG ACCGAGGTTTTTCTA TTTATTTGGGCCATC TERM 1699 1390446 - 1390474 + r 100 -19.1 -3.81557 | opp_overlap 1390443 1390452, overlap 1390444 1390452 CCAAGAAATTCATTT GAAAAACCTCGGT TTG ACCGAGGTTTTTC TATTTATTTGGGCCA TERM 1700 1390452 - 1390468 + r 100 -12.3 -5.30448 | opp_overlap 1390452 1390443, overlap 1390446 1390444 AATTCATTTGAAAAA CCTCGGT TTG ACCGAGG TTTTTCTATTTATTT TERM 1701 1390468 - 1390452 - R 100 -12.3 -4.63184 | opp_overlap 1390446 1390444 1390452, overlap 1390443 AATTCATTTGAAAAA CCTCGGT TTG ACCGAGG TTTTTCTATTTATTT spr1406 1390657 - 1390478 - | hypothetical protein TERM 1702 1390545 - 1390558 + g 82 -3.9 -5.37345 | opp_overlap 1390545 AAACTTGTTAAGATA GATAA GAAT TTATC TTTTTTCTCCTTGAA spr1407 1392404 - 1390809 - | hypothetical protein def 1392826 - 1392416 - | peptide deformylase TERM 1703 1392910 - 1392944 + r 81 -8.1 -4.19648 | gap 1, opp_overlap 1392919, overlap 1392919 CCTTTCCCTCAACTG TAGC-AAAAAGCCATC CGAA GATGACTTTTTTGCTA TTTAATTTCTGTATA TERM 1704 1392919 - 1392934 + r 74 -3.2 -5.32699 | opp_overlap 1392919, overlap 1392910 CAACTGTAGCAAAAA GCCATC CGAA GATGAC TTTTTTGCTATTTAA TERM 1705 1392934 - 1392919 - R 74 -5.4 -4.74801 | opp_overlap 1392919 1392910 CAACTGTAGCAAAAA GCCATC CGAA GATGAC TTTTTTGCTATTTAA spr1409 1393733 - 1392942 - | putative glutathione S-transferase YghU TERM 1706 1393286 - 1393276 - G 76 -6.8 -4.42386 | opp_overlap 1393276 CCCCCACCTAGAAAA GGTG CTG CACC TGCTTGCCAGAATAG pacL 1396442 - 1393746 - | P-type ATPase - calcium transporter TERM 1707 1396538 - 1396513 - H 100 -11.3 -5.40464 | opp_overlap 1396512 1396511, overlap 1396477 1396472 CACGACAAACAAAAA GAGACCTGTTA ATCA TAACAAGTCTC GCTGTTTAAGATAGG spr1411 1396746 - 1397930 + | cation efflux family protein TERM 1708 1397924 - 1397965 + T 82 -8.9 -3.97947 | opp_overlap 1397925, overlap 1397925 TCAAGAAACCAAAAA AGAATAGAGAAATCCTTTC ATGA GACGGGATTTTTCTATTCG TTTATACTCAATAAA TERM 1709 1397964 - 1397925 - T 93 -8 -5.46129 | opp_overlap 1397925 1397924 CAAGAAACCAAAAAA GAATAGAGAAATCCTTTC ATGA GACGGGATTTTTCTATTC GTTTATACTCAATAA TERM 1710 1397925 - 1397964 + T 87 -12.4 -2.98447 | opp_overlap 1397925, overlap 1397924 CAAGAAACCAAAAAA GAATAGAGAAATCCTTTC ATGA GACGGGATTTTTCTATTC GTTTATACTCAATAA ABC-NBD 1399944 - 1398073 - | ABC transporter ATP-binding protein cca 1401140 - 1399941 - | tRNA CCA-pyrophosphorylase TERM 1711 1401102 - 1401124 + g 86 -10.6 -3.79787 | opp_overlap 1401103, overlap 1401103 TTCTAATACTGGTAA AGCCTTCTGA AAT TCAGAAGGCA TTTGCGTTAATCTCA TERM 1712 1401123 - 1401103 - G 100 -14.1 -3.6106 | opp_overlap 1401102 1401103 TCTAATACTGGTAAA GCCTTCTGA AAT TCAGAAGGC ATTTGCGTTAATCTC TERM 1713 1401103 - 1401123 + g 93 -14.1 -2.8739 | opp_overlap 1401103, overlap 1401102 TCTAATACTGGTAAA GCCTTCTGA AAT TCAGAAGGC ATTTGCGTTAATCTC dapB 1401904 - 1401137 - | dihydrodipicolinate reductase TERM 1714 1401434 - 1401455 + g 87 -6.5 -5.22006 | CTCAGCTGTTTTAAT GGCTGTTCC ACTC GGAGCATCC TTTTTCTTGTCATGA spr1415 1403029 - 1402181 - | hypothetical protein spr1416 1403417 - 1403031 - | hypothetical protein glmM 1404831 - 1403479 - | phosphoglucomutase/phosphomannomutase family protein spr1418 1405634 - 1404855 - | hypothetical protein spr1419 1406499 - 1405621 - | hypothetical protein TERM 1715 1406410 - 1406394 - GR 79 -6.7 -4.58644 | AAGCAACAATCAAAA TATCAAT CAG ATTGATA GCTATCGTCCATGGA spr1420 1406569 - 1406396 - | hypothetical protein trxB 1406614 - 1407582 + | pyridine nucleotide-disulphide oxidoreductase family protein TERM 1716 1407616 - 1407587 - T 80 -5 -5.26316 | opp_overlap 1407590, overlap 1407590 CCAGTTTATAAAAAA GAACCACGAGTC ACATAG GATTCGTGGTTT TATAATTCATCCGCT TERM 1717 1407613 - 1407590 - T 80 -6.7 -4.72201 | opp_overlap 1407590, overlap 1407587 GTTTATAAAAAAGAA CCACGAGTC ACATAG GATTCGTGG TTTTATAATTCATCC TERM 1718 1407590 - 1407613 + T 89 -8.9 -4.56607 | opp_overlap 1407590 1407587 GTTTATAAAAAAGAA CCACGAGTC ACATAG GATTCGTGG TTTTATAATTCATCC spr1422 1408527 - 1407616 - | hypothetical protein spr1423 1409501 - 1408524 - | hypothetical protein spr1424 1410388 - 1409498 - | hypothetical protein TERM 1719 1410432 - 1410410 - R 100 -11.4 -4.34402 | CTCCTTATATCAAAA GAAGTTTGGC AAC ACCAAACTTC AACTAGCTTATCCAA aldR 1410820 - 1410440 - | endoribonuclease L-PSP spr1426 1411424 - 1410831 - | GTPase EngB clpX 1412659 - 1411427 - | ATP-dependent protease ATP-binding subunit spr1428 1412861 - 1412691 - | hypothetical protein dfr 1413367 - 1412861 - | dihydrofolate reductase TERM 1720 1413474 - 1413453 - R 93 -8.1 -5.65678 | opp_overlap 1413453 ACAAAATAGAAAAAA TCTGTAAGA AATT TCCTACAGA TTTATCTATGTTTCC dpr 1414033 - 1413497 - | non-heme iron-containing ferritin TERM 1721 1414496 - 1414473 - R 78 -2.4 -5.59962 | gap 1 TAAAACAAAGAAAAA GAGGG-TGCTA CTA TCACATCCCTC TTTCAAATCATCGCT lytC 1416016 - 1414511 - | 1,4-beta-N-acetylmuramidase TERM 1722 1416031 - 1416005 - G 76 -3.1 -5.24129 | gap 1 CTCTCCTATAAAAAA TGTAACAGACAT CTGA ATG-CTGTTCCA CCTAGCTTTTGCTAC tpiA 1416833 - 1416054 - | triosephosphate isomerase TERM 1723 1416095 - 1416081 - G 70 -8.6 -3.33399 | GTCAAGCAAAGCCAA GAAGCT TTC AGCTTC AAGTGACGCACCACC TERM 1724 1416457 - 1416467 + g 79 -5.4 -4.9251 | overlap 1416457 GGAAGCATACCGTTC GCAA AGA TTGC TTTTGCTTTTTTGTT TERM 1725 1416457 - 1416473 + g 81 -3 -5.5353 | overlap 1416457 GGAAGCATACCGTTC GCAAAG ATTGC TTTTGC TTTTTTGTTGATATC spr1433 1417587 - 1416910 - | hypothetical protein metA 1418540 - 1417596 - | homoserine O-succinyltransferase TERM 1726 1417898 - 1417886 - G 70 -5.5 -4.45168 | opp_overlap 1417886 TGGCCAAAATAGAAA CCCCA ACC TGAGG TCCTTCTGATAAAAT TERM 1727 1418695 - 1418721 + r 70 -8 -3.22298 | opp_overlap 1418701, overlap 1418696 1418701 TATATCCTAGTGTAG AGAAAACAGCCC TAG GGACTGTTTTCA TTAATAATGCATAAG TERM 1728 1418696 - 1418720 + r 82 -11.5 -2.53164 | opp_overlap 1418701, overlap 1418695 1418701 ATATCCTAGTGTAGA GAAAACAGCCC TAG GGACTGTTTTC ATTAATAATGCATAA TERM 1729 1418701 - 1418715 + r 71 -5.6 -4.46615 | opp_overlap 1418701, overlap 1418696 1418695 CTAGTGTAGAGAAAA CAGCCC TAG GGACTG TTTTCATTAATAATG TERM 1730 1418715 - 1418701 - R 82 -7.8 -4.54047 | opp_overlap 1418701 1418696 1418695 CTAGTGTAGAGAAAA CAGCCC TAG GGACTG TTTTCATTAATAATG apt 1419252 - 1418722 - | adenine phosphoribosyltransferase TERM 1731 1419174 - 1419190 + g 73 -8.7 -3.76411 | opp_overlap 1419173 AAGGACTAATATCAC GGAAGGT AAT GCCTTCC TTTGGATAATTTTCA spr1436 1420080 - 1419322 - | hypothetical protein TERM 1732 1420373 - 1420361 - R 82 -7.7 -4.52857 | AGGTTGCAGATAAAA CTGAC GAA GTCAG TAATCATACGTACGG TERM 1733 1420504 - 1420480 - R 100 -11.5 -4.72272 | CTTCCCTAGCAAAAA GGAGAGAAGCA TTT TGTTTCTCTCC CTAGATCAACTGATA msmK 1421711 - 1420581 - | sugar ABC transporter, ATP-binding protein TERM 1734 1421800 - 1421822 + r 80 -9.2 -3.56643 | opp_overlap 1421800 CAAAAAAATAAAAAA GTTCTGTGCA ACT TGCACAAAAC TTTAGAGAATATCGG TERM 1735 1421822 - 1421800 - R 100 -11.4 -6.12458 | opp_overlap 1421800 CAAAAAAATAAAAAA GTTCTGTGCA ACT TGCACAAAAC TTTAGAGAATATCGG TERM 1736 1421990 - 1421961 - R 77 -8.7 -3.61232 | opp_overlap 1421966, overlap 1421966 TTTTTTAGAGAAATA CAAAAGAGCTAGC TTTA GCTAACTCTTTTC CTATGCGGAGAGAGG TERM 1737 1421966 - 1421985 + r 74 -6.4 -4.34402 | opp_overlap 1421961 1421966 TAGAGAAATACAAAA GAGCTAGC TTTA GCTAACTC TTTTCCTATGCGGAG TERM 1738 1421985 - 1421966 - R 95 -8.6 -4.87328 | opp_overlap 1421966, overlap 1421961 TAGAGAAATACAAAA GAGCTAGC TTTA GCTAACTC TTTTCCTATGCGGAG entB 1422736 - 1422161 - | isochorismatase family protein codY 1423524 - 1422736 - | transcriptional repressor CodY TERM 1739 1423619 - 1423656 + r 79 -8.9 -3.82442 | opp_overlap 1423622, overlap 1423622 ACTTGCATTGACTTA CAATTTAATTAAAAA CCAGAATA TTTTTAATTAAATTG TTCCTTTTCTATTGA TERM 1740 1423763 - 1423781 + r 93 -7.4 -5.42164 | opp_overlap 1423763 TCCTTATATAAAAAA GCGATTCA TTT TGAACCGC TTTTTCTTATTTATC TERM 1741 1423781 - 1423763 - R 100 -9.6 -5.36441 | opp_overlap 1423763 TCCTTATATAAAAAA GCGATTCA TTT TGAACCGC TTTTTCTTATTTATC spr1440 1425362 - 1423788 - | ATP-dependent RNA helicase, putative TERM 1742 1425013 - 1425025 + g 77 -4.9 -4.89063 | ATATGGGCACCAGAT TTAAG AGC CTTAA TTTGTTTTTCAATGC oxlT 1426787 - 1425561 - | oxalate:formate antiporter merA 1426977 - 1428293 + | pyridine nucleotide-disulfide oxidoreductase TERM 1743 1428316 - 1428332 + F 100 -9.4 -4.93365 | opp_overlap 1428316 TCTCATCTTAACTGA CAGCCC TCTTT GGGCTG TTTTTACTTCTACGA TERM 1744 1428332 - 1428316 - f 72 -9.4 -2.53876 | opp_overlap 1428316 TCTCATCTTAACTGA CAGCCC TCTTT GGGCTG TTTTTACTTCTACGA spr1443 1428392 - 1429735 + | hypothetical protein cobQ 1429735 - 1430517 + | hypothetical protein TERM 1745 1430535 - 1430567 + F 100 -10.7 -4.16397 | opp_overlap 1430542, overlap 1430542 AAAGGAAAATGATAT CAAAGAACTCCGTTA TCT TGTCGGAGTTTTTTG TCTTTTCTTTTACCC TERM 1746 1430542 - 1430560 + F 86 -5.2 -5.65678 | opp_overlap 1430542, overlap 1430535 AATGATATCAAAGAA CTCCGTTA TCT TGTCGGAG TTTTTTGTCTTTTCT pepQ 1430643 - 1431725 + | dipeptidase TERM 1747 1431700 - 1431711 + T 70 -4.4 -4.78077 | TCTTTACAAGCACCA GCAA AGAT TTGC TTTATTTTGATTAAA TERM 1748 1432057 - 1432089 + T 100 -12.2 -4.69549 | opp_overlap 1432060 ATTAATTTATCCGAA GGATTTAGTTCTGT ACTGC ACAGGACTAAGTCC TTTTAGTTTTACCTT IS861-truncation 1432536 - 1432048 - | degenerate transposase (orf2) IS861-truncation 1432870 - 1432598 - | degenerate transposase (orf2) IS861-truncation 1433368 - 1433096 - | degenerate transposase (orf1) TERM 1749 1433357 - 1433317 - G 100 -11.4 -5.19328 | opp_overlap 1433315 1433314 ATTTCATAATAAAAA CACTCCAAAAGTTAGA TTTTTTCTG TCTAACTTTTGGGGTG CAGTTCATCATTTCA spr1449 1434001 - 1433540 - | hypothetical protein pdxK 1434752 - 1433979 - | phosphomethylpyrimidine kinase TERM 1750 1434276 - 1434286 + g 76 -6.8 -4.43213 | TAAATCATGCAATTT CTGC GCT GCAG TTTTCATGTCTTCCA truA 1435491 - 1434742 - | tRNA pseudouridine synthase A TERM 1751 1435808 - 1435790 - g 93 -7.5 -5.50723 | opp_overlap 1435789 1435790 GTATCAAAAGAAAAA CTTAGGA ATCAA TCCTAAG CTCTCTTCTGAAGTA spr1452 1435671 - 1435832 + | hypothetical protein MFS_transporter 1436955 - 1435804 - | major facilitator transporter spr1454 1437824 - 1437195 - | hypothetical protein TERM 1752 1437620 - 1437633 + g 71 -6.7 -4.13767 | opp_overlap 1437619, overlap 1437609 TTAAGCGCAAGAGAC TTGGC CTTT GCCAA TTTTCACCTACACGG phnA 1438165 - 1437827 - | hypothetical protein TERM 1753 1438284 - 1438267 - R 86 -5.6 -5.68039 | opp_overlap 1438266 1438267 AAATTTAGAAAAAAA CCGATA TCAATC TATCGG CTTTTCTACATTTAC cmk 1438967 - 1438296 - | cytidylate kinase TERM 1754 1438602 - 1438612 + g 70 -5.4 -4.44667 | opp_overlap 1438596, overlap 1438599 CATGACAATCCCGCC TTGC TGG GCAA TTTCTTGTTGGAGAG spr1457 1439452 - 1438976 - | hypothetical protein fer 1439432 - 1439710 + | ferredoxin gtrB 1440863 - 1439772 - | glycosil transferase TERM 1755 1440105 - 1440090 - GTR 83 -3.3 -5.54894 | AATGGAGTAAAAAAA GAGTT GCCTAA AACTC CAACTGGTCTTGCCA TERM 1756 1440660 - 1440640 - GTR 82 -9.8 -3.53091 | ATTTCTGTTTCCAAA TCTGGAAG TAAAG CTTCCAGA GCCTGATAAAAAAGA TERM 1757 1440689 - 1440674 - GTR 90 -7.6 -5.252 | opp_overlap 1440670 1440674 GAGCCTGATAAAAAA GAGGAA GTAC TTCCTC TTCGTTTAAACAAGG galE 1441746 - 1440727 - | UDP-glucose 4-epimerase TERM 1758 1441954 - 1441936 - R 78 -10.4 -2.61383 | opp_overlap 1441935, overlap 1441935 1441945 AGTTCTATCCACAAC CTCAAAAC AGT GTTTTGAG CTGACTTCGTCAGTT TERM 1759 1442000 - 1441980 - R 72 -8.3 -3.35996 | overlap 1441981 CAGTTCTATCCACAA CCTCAAAGC AGT GCTTTGAGT AACCCGCGGCTAGTT TERM 1760 1441999 - 1441981 - R 84 -11.8 -2.61383 | overlap 1441980 AGTTCTATCCACAAC CTCAAAGC AGT GCTTTGAG TAACCCGCGGCTAGT spr1461 1443159 - 1442047 - | hypothetical protein TERM 1761 1442622 - 1442634 + g 76 -3.3 -5.27335 | opp_overlap 1442622 AGCCTGATGATAAGA GTGTC AGA GTCAC TTTTTCTTTGACCAG spr1462 1443964 - 1443167 - | hypothetical protein TERM 1762 1443957 - 1443983 + g 73 -9.4 -3.23183 | opp_overlap 1443964 TGGATCACTTCACTT GCTAACATGGAG CAC CTCCTTGATAGC TTGAATCTTATCTAC spr1463 1444628 - 1443951 - | hypothetical protein TERM 1763 1444603 - 1444577 - G 77 -8 -4.29738 | CCACATCTAGTAAAA TAGCCCCCTGTG ACA CAAAGGAAGCTA CCAATTCTAATCTCT TERM 1764 1444701 - 1444724 + r 90 -8.2 -4.91046 | opp_overlap 1444703, overlap 1444703 TCTTGTACCTAAAAA AACTGCAATC CACA GATTGCAGTC TTTCTTTATTTTCTA TERM 1765 1444722 - 1444703 - R 100 -10.8 -5.47218 | opp_overlap 1444701 1444703 TTGTACCTAAAAAAA CTGCAATC CACA GATTGCAG TCTTTCTTTATTTTC TERM 1766 1444703 - 1444722 + r 93 -10.8 -4.03308 | opp_overlap 1444703, overlap 1444701 TTGTACCTAAAAAAA CTGCAATC CACA GATTGCAG TCTTTCTTTATTTTC ctpE 1447066 - 1444730 - | P-type ATPase - metal cation transport TERM 1767 1446747 - 1446759 + g 77 -7.7 -4.28651 | overlap 1446741 AGAGCAACTTCCTGA CCATC ACG GATGG TTTTGACCTTTTCCT TERM 1768 1447828 - 1447814 - g 76 -2.1 -5.39755 | opp_overlap 1447820, overlap 1447819 1447820 CACAATGATAAAAAA CCAAA TCCAC TCTGG TGGTTTATCCGCATC spr1465 1447154 - 1447948 + | hypothetical protein TERM 1769 1447959 - 1447978 + T 74 -5.7 -4.66057 | opp_overlap 1447959 CATAGAAGAAATGAA CCTTGGC CAAACA GCTAAGG TTTTCATTTATATAT TERM 1770 1448146 - 1448126 - T 80 -6.9 -4.62054 | opp_overlap 1448126 1448130 CTAATCAAATCAAAA GCCACTCTA CAA TAGAGTAAC TTTAAGATTGTCCAT TERM 1771 1448199 - 1448179 - T 100 -11.9 -4.89009 | opp_overlap 1448179 1448191, overlap 1448191 1448196 ATACTCAATGAAAAA GCCCTCTGA AAA TCAGAGAGC TGATTTGAGCTCGGG TERM 1772 1448179 - 1448199 + T 76 -9.7 -2.92613 | opp_overlap 1448179 1448191 1448196, overlap 1448191 ATACTCAATGAAAAA GCCCTCTGA AAA TCAGAGAGC TGATTTGAGCTCGGG cadD 1448855 - 1448241 - | cadmium resistance protein TERM 1773 1448797 - 1448783 - G 74 -4.4 -4.86731 | GCTGTGCAAATAAAA TAATTA AAA TAATTA AATAATCGATACTGG TERM 1774 1449026 - 1449051 + r 73 -7.8 -3.86897 | opp_overlap 1449031 1449046, overlap 1449026 AGTGACTACTTCCAT GTAAAGTATA ACATAC TATACTTTAC TTTGTAAAGAGTGGG TERM 1775 1449116 - 1449090 - R 100 -16 -2.87132 | opp_overlap 1449083 1449082 GGGGGCTTGCATACA GCTACTCGGCTT GAA AAGCCGAGTAAC TGCGCACCTTTATGG TERM 1776 1449222 - 1449203 - R 100 -10 -5.4756 | opp_overlap 1449203 1449214 AACCTCAATAAAAAA GCCCTCTG AAGT CAGAGAGC TGATTTGAGCCCGGG TERM 1777 1449427 - 1449412 - R 100 -9 -6.23545 | GTGAAACAAAAAAAA TCTCCC CGAA GGGAGA AAAGCTGGTTTATTT TERM 1778 1449535 - 1449516 - R 79 -5.7 -5.1925 | opp_overlap 1449516 TGACAACGCAAAAAA GCTACCC AATTTA GAGTAGC TTCATTATCAAGATA rpsO 1449858 - 1449589 - | 30S ribosomal protein S15 TERM 1779 1449670 - 1449680 + g 80 -2.4 -5.53991 | TGCAAGCAAGTTACG ACGG CGA CCGA TTTTTTTCATCAATC TERM 1780 1449695 - 1449712 + g 70 -5.5 -4.38219 | ATTTTTTTCATCAAT CCACGGT AAGT AGCGTGG TCTTTTTTGTGTTGT spr1468 1450628 - 1449999 - | hypothetical protein TERM 1781 1450643 - 1450669 + H 70 -8.2 -3.33315 | TTTTTTATACCTCTC TTGTTGTAATTA TTT TAGTTACAGCAA TTGTGACACTCTTAA spr1469 1450858 - 1451067 + | hypothetical protein TERM 1782 1451450 - 1451475 + G 100 -14.1 -5.80364 | AAGGTGGAACCACGT TGCGACGTCCT TTCG AGGATGTCGCA TTTTTTTATTAGGAT spr1470 1451432 - 1451638 + | hypothetical protein spr1471 1451642 - 1451821 + | hypothetical protein TERM 1783 1452168 - 1452180 + G 75 -7.7 -3.9712 | TGGGAGTTGGTCCAG CCATC GAA GATGG TTTCTACTACGATAC TERM 1784 1452248 - 1452230 - g 70 -9.6 -2.54276 | overlap 1452229 ATCTCTAACGAAGAC CTTCCTCG TAT CGAAGAAG AAATGCAAAAAATCG thrS 1451879 - 1453822 + | threonyl-tRNA synthetase TERM 1785 1453854 - 1453838 - T 100 -12.3 -4.46926 | opp_overlap 1453838 GAGTCTAGCATAAAA GCCTCCA ATC TGGAGGC TTTTTCTCATCTATT TERM 1786 1453838 - 1453854 + T 100 -12.3 -4.97666 | opp_overlap 1453838 GAGTCTAGCATAAAA GCCTCCA ATC TGGAGGC TTTTTCTCATCTATT hk01 1454845 - 1453871 - | sensor histidine kinase rr01 1455515 - 1454838 - | DNA-binding response regulator TERM 1787 1455613 - 1455583 - H 82 -9.9 -3.68265 | opp_overlap 1455585 1455610, overlap 1455610 AAACTGAATTTGAAA TAGCCTGTTTTTA GCCAG TACAAACAGGCTA TGCTACTAGCTAATT spr1475 1455671 - 1456744 + | hypothetical protein TERM 1788 1456818 - 1456773 - T 80 -7.1 -4.59081 | opp_overlap 1456778, overlap 1456778 TAAATGTATACAAAA CAAAAGACCTAGAATACATAC TTTC ATGTGCATTCTAAGTCTTTTT AAATAGAATCTAATA TERM 1789 1456813 - 1456778 - T 89 -7 -5.23292 | opp_overlap 1456778, overlap 1456773 GTATACAAAACAAAA GACCTAGAATACATAC TTTC ATGTGCATTCTAAGTC TTTTTAAATAGAATC TERM 1790 1456778 - 1456813 + T 70 -4.1 -4.66609 | opp_overlap 1456778 1456773 GTATACAAAACAAAA GACCTAGAATACATA CTTTCA TGTGCATTCTAAGTC TTTTTAAATAGAATC spr1476 1457137 - 1456835 - | hypothetical protein TERM 1791 1457205 - 1457189 - RH 93 -5.1 -5.96894 | opp_overlap 1457189 ATCCAAAGAAAAAAA GAGGG CATTTAT CCCTC TTAATCCTTCATCTG spr1477 1457643 - 1457206 - | Rrf2 family protein spr1479 1458567 - 1457719 - | hypothetical protein spr1478 1457631 - 1457825 + | hypothetical protein TERM 1792 1458613 - 1458628 + FH 93 -7.6 -5.59357 | opp_overlap 1458611 ACATAAAAAGTCACA GCTAGA GAAA TCTAGC TTTTTTTGATATACT marR 1458673 - 1459323 + | iron-dependent transcriptional regulator TERM 1793 1459366 - 1459344 - g 70 -9.2 -3.14881 | opp_overlap 1459344 CAAGTCCCCTACCAA CCCTGAAAGT TTT ATTTTCAGGG TTTTATTTCTATCAT TERM 1794 1459344 - 1459366 + G 95 -11.4 -5.06016 | opp_overlap 1459344 CAAGTCCCCTACCAA CCCTGAAAGT TTT ATTTTCAGGG TTTTATTTCTATCAT spr1481 1459304 - 1459474 + | hypothetical protein TERM 1795 1459675 - 1459691 + G 80 -8.1 -4.40804 | ATGGGGAAATTACTT TGGTATT GTT AATACCA TTTTGTCCGGTGCTA TERM 1796 1459949 - 1460007 + G 100 -23.4 -4.5287 | overlap 1459950 1459951 GTAACAACTATTGCC TTTGCACTGTCCCTCATTGCCAATGCTT TGA ATGCATTGGCAATGAGGGACAGTGGGGC TTTTGGTTGATTTAC TERM 1797 1459950 - 1460006 + G 100 -26.9 -3.30638 | overlap 1459949 1459951 TAACAACTATTGCCT TTGCACTGTCCCTCATTGCCAATGCTT TGA ATGCATTGGCAATGAGGGACAGTGGGG CTTTTGGTTGATTTA TERM 1798 1459951 - 1460005 + G 100 -28.2 -2.57298 | overlap 1459950 1459949 AACAACTATTGCCTT TGCACTGTCCCTCATTGCCAATGCTT TGA ATGCATTGGCAATGAGGGACAGTGGG GCTTTTGGTTGATTT spr1482 1459595 - 1460017 + | hypothetical protein spr1483 1460276 - 1460713 + | hypothetical protein TERM 1799 1460802 - 1460785 - T 70 -8.4 -3.24256 | opp_overlap 1460785, overlap 1460784 1460781 ATTTTCAAAAACAAG GGGAGG GATTAA CCTCCC TTATATTAGACATAA TERM 1800 1460785 - 1460802 + T 73 -8.4 -3.66784 | opp_overlap 1460785 1460784 1460781 ATTTTCAAAAACAAG GGGAGG GATTAA CCTCCC TTATATTAGACATAA spr1484 1461107 - 1460808 - | hypothetical protein TERM 1801 1461515 - 1461536 + H 72 -8.1 -3.494 | opp_overlap 1461515 ATTTTATCCAATCTA TACGTTCTT TTTT AGGAACGTA TTCTCTAACAGCTTG TERM 1802 1461678 - 1461694 + H 86 -5.1 -5.626 | opp_overlap 1461681, overlap 1461679 TTTTTGCACATTATC ACACCTT TCT AAGGTGG TTTTTTTATCCCGTA TERM 1803 1461679 - 1461693 + H 82 -8.6 -3.96475 | opp_overlap 1461681, overlap 1461678 TTTTGCACATTATCA CACCTT TCT AAGGTG GTTTTTTTATCCCGT TERM 1804 1461796 - 1461778 - H 74 -5.4 -4.78149 | TCCACAATCTAAAAA TTTATCAT TTT ATGACAAA CATACTATCGTTAAA TERM 1805 1461864 - 1461829 - H 73 -7.8 -3.76952 | opp_overlap 1461829 CTGATTTAATCGAAA TTTTGAGTTATAAACT CCTC AGTTTCGAACTCAAAA TTAGTCGTGCAGGAT spr1485 1462112 - 1462423 + | hypothetical protein TERM 1806 1462424 - 1462468 + T 100 -15.2 -4.84527 | opp_overlap 1462435, overlap 1462426 TGGAGTATTTTATGA TCGATGAGAAAGACCAAGCC GACTG GGCTTGGTCTTTCTTATCTC TTTTTAGTATCTAGG TERM 1807 1462426 - 1462466 + T 100 -22.2 -4.03909 | opp_overlap 1462435, overlap 1462424 GAGTATTTTATGATC GATGAGAAAGACCAAGCC GACTG GGCTTGGTCTTTCTTATC TCTTTTTAGTATCTA TERM 1808 1462457 - 1462435 - T 100 -13.5 -3.98214 | opp_overlap 1462426 1462424 ATGATCGATGAGAAA GACCAAGCC GACTG GGCTTGGTC TTTCTTATCTCTTTT spr1486 1462905 - 1462462 - | D-tyrosyl-tRNA deacylase relA 1465157 - 1462935 - | GTP pyrophosphokinase TERM 1809 1465268 - 1465238 - R 93 -5 -5.97979 | AGAATAAGAAAAAAA TAATTCAAAATT GCTTGAT AATTCTGAATTA TTGGCCCGTAATATA spr1488 1465475 - 1465305 - | hypothetical protein TERM 1810 1465498 - 1465518 + H 72 -8.3 -3.35996 | opp_overlap 1465508, overlap 1465499 AACTAGCCGCAGGTT ACTCAAAGC ACC GCTTTGAGG TTGTAGATAAGACTG TERM 1811 1465499 - 1465517 + H 84 -11.8 -2.61383 | opp_overlap 1465508, overlap 1465498 ACTAGCCGCAGGTTA CTCAAAGC ACC GCTTTGAG GTTGTAGATAAGACT TERM 1812 1465545 - 1465529 - H 87 -10.9 -3.48924 | opp_overlap 1465526 TGAGGTTGTAGATAA GACTGAC AAA GTCAGTC ACATATATACGGCAA TERM 1813 1465682 - 1465697 + G 71 -7.6 -3.79882 | ATTTCTATCTTTGCT CTCCTA ACGT TAGGAG TTTGCTGCCTGTTCT spr1489 1465568 - 1465786 + | hypothetical protein TERM 1814 1465926 - 1465953 + F 74 -5.5 -4.788 | opp_overlap 1465926 1465919 TTGATAAATTGATAA CCAGCCTGTCT TCATCT AGTCATGCTGG TTTTTAAGTTCATTT spr1490 1466101 - 1466781 + | metallo-beta-lactamase superfamily protein TERM 1815 1466876 - 1466840 - T 89 -8.8 -4.46212 | gap 1, opp_overlap 1466840 CTTTCTATTATAAAA GGCATCCTATCAAG-GT TTTC ACACGTGATTGGATGCC TTTTTTCTGATGACT TERM 1816 1466840 - 1466876 + T 95 -8.8 -5.31877 | gap 1, opp_overlap 1466840 CTTTCTATTATAAAA GGCATCCTATCAAG-GT TTTC ACACGTGATTGGATGCC TTTTTTCTGATGACT pepO 1468796 - 1466904 - | endopeptidase O TERM 1817 1468506 - 1468520 + g 71 -7.2 -3.91716 | opp_overlap 1468505 1468495 AAAATCCGCAAAAGT TTCCAA TTC TTGGAA TTCTTTAAGGAGTGG TERM 1818 1468951 - 1468915 - H 84 -8.1 -4.46212 | opp_overlap 1468915 1468910 1468907 CTTTCCATGATAAAA CGCATAATTCCAAGTTT TTT ACACTTGATACTATGCG TTTTATAATTTAGAA psaB 1469087 - 1469809 + | manganese ABC transporter, ATP-binding protein psaC 1469806 - 1470654 + | ABC transporter membrane-spanning permease - manganese transport TERM 1819 1471039 - 1471025 - g 80 -6.4 -4.75954 | opp_overlap 1471033 1471038, overlap 1471021 1471030 AAAACTGAAAACAAA GACTAC TTC GCAGTC AGCGACGGCGTTGAT psaA 1470686 - 1471615 + | ABC transporter substrate-binding protein - manganese transport. tpx 1471738 - 1472229 + | thiol peroxidase TERM 1820 1472276 - 1472236 - T 100 -9.1 -5.36441 | opp_overlap 1472236 GCCCTATAGAAAAAA TCCTCTGTCACAAAGAG TTCCCTG CTCTTTGAAACGGAGGA TTTTTGAATATTAGT TERM 1821 1472236 - 1472276 + T 100 -9.8 -4.75308 | opp_overlap 1472236 GCCCTATAGAAAAAA TCCTCTGTCACAAAGAGT TCCCT GCTCTTTGAAACGGAGGA TTTTTGAATATTAGT spr1496 1475099 - 1472325 - | hypothetical protein TERM 1822 1472614 - 1472602 - GT 81 -7.7 -4.32034 | TCATTATTATGAAAA CCAAG AAC CTTGG TAGTGGAGAGTTCAC TERM 1823 1474232 - 1474271 + gT 73 -5.6 -4.61482 | overlap 1474229 1474226 1474233 1474235 1474238 AATTAGTCTGAGCCT TGTCAAGGGTCTCTTGCC CCTT GTCTAGAGACTCTTGTCC TTCTTTTTTCAAAAG TERM 1824 1474233 - 1474270 + gT 79 -9.1 -3.36166 | overlap 1474229 1474226 1474232 1474235 1474238 ATTAGTCTGAGCCTT GTCAAGGGTCTCTTGCC CCTT GTCTAGAGACTCTTGTC CTTCTTTTTTCAAAA TERM 1825 1474235 - 1474268 + gT 83 -10.3 -3.23795 | overlap 1474229 1474226 1474233 1474232 1474238 TAGTCTGAGCCTTGT CAAGGGTCTCTTGCC CCTT GTCTAGAGACTCTTG TCCTTCTTTTTTCAA TERM 1826 1474564 - 1474583 + gT 73 -2.1 -5.27938 | opp_overlap 1474567, overlap 1474567 TAAGTATGGTCTTTT AAAGAGG AATGAC CCTCTTC TTTTTCTTTAAAACT ABC-NBD 1475745 - 1475035 - | ABC transporter ATP-binding protein spr1498 1478397 - 1475986 - | hypothetical protein TERM 1827 1477491 - 1477501 + g 74 -4.6 -4.92385 | GCCTTGATTTCAATT GGGT ATA GCCC TTTTCTTTAGCTGTG TERM 1828 1478439 - 1478419 - R 88 -7.6 -5.13344 | ATACTAACATAAAAA GCCTAGAA ATCAA TCCTAGGC TTACAATTTTTTATT gpmA 1479142 - 1478450 - | phosphoglyceromutase TERM 1829 1479168 - 1479182 + r 75 -7.1 -4.27297 | CTCCTTTAAATTTTC CGAGG TTTCC CCTCG TTTATCTATTCTATT spr1500 1479381 - 1479193 - | hypothetical protein TERM 1830 1479264 - 1479274 + g 74 -4 -5.05712 | overlap 1479247 TTTGACAATGTTTGG CAAT CAC ATTG TTTTTGGTTGTTTCT spr1501 1479897 - 1479757 - | hypothetical protein TERM 1831 1480399 - 1480362 - R 100 -7.1 -5.88476 | opp_overlap 1480362 AAAATAAATAAAAAA CGCATCATATCAGGTAT TCAA AAACGTGATACAATGCG TTTAATAGACTATAA ileS 1483257 - 1480465 - | isoleucyl-tRNA synthetase TERM 1832 1483322 - 1483292 - RH 83 -6.2 -5.10877 | ATAACAAATTAAAAA CCACGACTTCCA AAAAGGA CGAAAATCGTGG TACCACCTTTATTCG spr1503 1483562 - 1483401 - | hypothetical protein spr1504 1483442 - 1483642 + | hypothetical protein divIVA 1484405 - 1483605 - | cell division protein DivIVA TERM 1833 1483676 - 1483700 + g 79 -9.3 -3.84712 | opp_overlap 1483678 CTTGAGGACTCACTA CAGGAGTTGGA GTT TCCACTTCCTG TTTAATCTGAGCTTC spr1506 1485253 - 1484402 - | hypothetical protein spr1507 1485447 - 1485184 - | hypothetical protein spr1508 1485986 - 1485447 - | hypothetical protein TERM 1834 1485561 - 1485573 + g 84 -7.7 -4.70879 | opp_overlap 1485560 1485561 TGTCAACAAATACAT GGTAG AAG CTACC TTTTTCAAATTTCCA spr1509 1486667 - 1485996 - | hypothetical protein TERM 1835 1486549 - 1486520 - G 70 -9.3 -3.25223 | gap 1, opp_overlap 1486511, overlap 1486523 CACCGATATGATGAA CACCTAGCGGAAGC AAG GCTTCCGCT-GTCG GTACATCTACATACT TERM 1836 1486546 - 1486523 - G 81 -11.8 -2.50988 | gap 1, opp_overlap 1486511, overlap 1486520 CGATATGATGAACAC CTAGCGGAAGC AAG GCTTCCGCT-G TCGGTACATCTACAT ftsZ 1487931 - 1486672 - | cell division protein FtsZ TERM 1837 1487409 - 1487431 + g 70 -7.9 -3.62275 | opp_overlap 1487412, overlap 1487412 GCGGTGTTTTCTTAT CAACAATTT CAAGC AAATTGTTG TTTGAGATAATCAAT ftsA 1489321 - 1487948 - | cell division protein FtsA TERM 1838 1489520 - 1489510 - R 71 -5.4 -4.56775 | AGCTGCTTGTAAAAA CTCT CTA AGAG CAAAAAAGAAAGCTC TERM 1839 1489549 - 1489528 - R 74 -3 -5.27779 | TCTAAGAGCAAAAAA GAAAGCTC TGTGTT AAGCTTCC TTTGCAATCATTTTT spr1512 1490244 - 1489540 - | hypothetical protein mutT 1490946 - 1490335 - | MutT/nudix family protein murF 1492306 - 1490933 - | UDP-N-acetylmuramoylalanine-D-glutamyl-lysine-D-alanyl-D-alanine ligase TERM 1840 1491689 - 1491699 + g 79 -5.4 -4.98531 | TGAAGCCATTCCGTC TGCA ATT TGCA TTTTTCCTTTAGCAA TERM 1841 1492401 - 1492411 + r 70 -8.2 -3.32294 | opp_overlap 1492401 1492400, overlap 1492400 CATTTTATATCAAAT GCGC TTC GCGC TTGTCAAAACTTTCC ddl 1493433 - 1492390 - | D-alanyl-alanine synthetase A TERM 1842 1493348 - 1493333 - G 79 -10.4 -3.57144 | GTCTTGACTGTGAAA CGGTCG TAAT CGACCG CACGCATGACACTCT TERM 1843 1493564 - 1493537 - R 71 -3.4 -5.02502 | CACACTATACAAAAA GAGGCCGATA GGAACGAT TTTCAGCCTC TTTGATTTTTTATAA recR 1494205 - 1493609 - | recombination protein RecR pbp2b 1496273 - 1494216 - | penicillin-binding protein 2B TERM 1844 1494511 - 1494499 - G 71 -4.1 -4.87786 | overlap 1494500 GCAACCTGATAAAAA CCTTG GTG CAAGA TGCTCATATCGGAGT TERM 1845 1495522 - 1495535 + g 84 -8.1 -4.67353 | GCTTCTGCTTCTTCC GCTGG GAGA CCAGC TTTTTCACTGGATAC TERM 1846 1496109 - 1496124 + g 79 -3.2 -5.52384 | overlap 1496110 TGTAATCTTGGTCTG ACTAGC TGAG GCTAGC TTTTTTTCGTAAAAA TERM 1847 1496185 - 1496170 - G 70 -5.4 -4.42974 | overlap 1496171 TGCATATACAACAAA CGACCA ATAA TGGTCA TAAAGAGTAAAATGA spr1518 1496473 - 1497324 + | phosphosugar-binding transcriptional regulator, putative TERM 1848 1497316 - 1497348 + T 100 -16.5 -4.67608 | opp_overlap 1497319, overlap 1497319 CAAAAACGTGTAAGA AAATCCTAGTTTGGC TGA GCCAAACTAGGATTG TTTTGTCTTAAAATG TERM 1849 1497345 - 1497319 - T 100 -18.2 -4.6635 | opp_overlap 1497316 1497319 AAACGTGTAAGAAAA TCCTAGTTTGGC TGA GCCAAACTAGGA TTGTTTTGTCTTAAA TERM 1850 1497319 - 1497345 + T 100 -18.2 -4.44211 | opp_overlap 1497319, overlap 1497316 AAACGTGTAAGAAAA TCCTAGTTTGGC TGA GCCAAACTAGGA TTGTTTTGTCTTAAA glk 1498224 - 1497340 - | ROK family protein npl-truncation 1498973 - 1498242 - | N-acetylneuraminate lyase subunit, truncation npl-truncation 1499159 - 1499064 - | N-acetylneuraminate lyase subunit, truncation TERM 1851 1499185 - 1499198 + r 85 -6.7 -5.39681 | CTATTATTTTTATTT TCTGC TAAA GCAGA TTTTTCTTTACTTCT spr1522 1499806 - 1499342 - | hypothetical protein spr1523 1500437 - 1500093 - | hypothetical protein spr1524 1500986 - 1500534 - | hypothetical protein ABC-MSP 1502098 - 1501259 - | sugar ABC transporter, permease protein ABC-MSP 1503010 - 1502114 - | sugar ABC transporter, permease protein ABC-SBP 1504560 - 1503232 - | sugar ABC transporter, sugar-binding protein TERM 1852 1503272 - 1503300 + g 72 -4.5 -4.73388 | overlap 1503273 GTTTCGTTTGCTTTT TCAGTGAAGGCTT TCA AAGCATCCGCTGG TTTTTCGTCACCATT PTS-EII 1506217 - 1504685 - | PTS system, IIBC components nanE 1506919 - 1506221 - | N-acetylmannosamine-6-phosphate 2-epimerase TERM 1853 1507069 - 1507038 - R 79 -8.8 -3.77219 | overlap 1507040 ACTAGCCAAGTCAAA CAGCTCCTCTAAAA GTAC TTTCAGAGGAGCAA GTCGACCTATAATAG TERM 1854 1507067 - 1507040 - R 95 -13.6 -3.46783 | overlap 1507038 TAGCCAAGTCAAACA GCTCCTCTAAAA GTAC TTTCAGAGGAGC AAGTCGACCTATAAT spr1530 1508202 - 1507099 - | hypothetical protein TERM 1855 1508105 - 1508134 + g 76 -2.1 -5.50499 | opp_overlap 1508110 1508112, overlap 1508108 TCTGCATTATCTGGA TCATAGAGAAGAG TAAT CTCTGCTCCATCA TTTTTTTGCATGTAG nanB 1510307 - 1508214 - | sialidase B precursor (neuraminidase B) TERM 1856 1509827 - 1509841 + g 83 -7.2 -4.79451 | opp_overlap 1509827 CTTCTATTCCATTAA CATACA TTG TGTATG TTTTATCTTTAGAAT TERM 1857 1510284 - 1510306 + g 95 -4.3 -5.73672 | AGAAATTCCTAGTTT TGAATAAAG ACCTC TTTTATTCA TTTTTTTCCTTCTTT ABC-MSP 1511158 - 1510325 - | ABC transporter permease ABC-MSP 1512042 - 1511158 - | ABC transporter permease TERM 1858 1512135 - 1512153 + r 71 -3.2 -5.05301 | opp_overlap 1512139 TCTACTGAACAGCCT CAAATAAA TCG TTTAATTG TTTTTCTGCTTCTTT ABC-SBP 1513458 - 1512121 - | ABC transporter substrate-binding protein spr1535 1513929 - 1513477 - | hypothetical protein TERM 1859 1514877 - 1514902 + r 80 -10.5 -3.06384 | opp_overlap 1514877, overlap 1514874 1514879 ATGTCATCAAAAAAA GATAGCAGGCT TGAA AACCTGCTATC TCCTTCTATTTTTAC TERM 1860 1514902 - 1514877 - R 100 -12.7 -5.52986 | opp_overlap 1514877 1514874 1514879 ATGTCATCAAAAAAA GATAGCAGGCT TGAA AACCTGCTATC TCCTTCTATTTTTAC nanA 1518051 - 1514944 - | sialidase A precursor (neuraminidase A) spr1537 1518521 - 1518294 - | hypothetical protein TERM 1861 1518632 - 1518620 - R 71 -6.3 -4.24623 | opp_overlap 1518598 1518619 1518620 1518628, overlap 1518598 1518626 TTAAATATACATAAA GATAG ATT CTATC ACTTTTTATAAGTGT TERM 1862 1518801 - 1518788 - R 70 -2.4 -5.35224 | opp_overlap 1518788, overlap 1518783 TCCATAAAAAGAAAA CAGA AACTCA TCTG TTTTTATACTCAATG TERM 1863 1518855 - 1518873 + r 78 -10.4 -2.61383 | overlap 1518854 GCTAGCCGCATGATG CTCAAAAC ACT GTTTTGAG GTTGTAGATAAGACT TERM 1864 1518900 - 1518918 + r 78 -10.4 -2.61383 | opp_overlap 1518885 1518899, overlap 1518899 GACTGACAAAGTCAG CTCAAAAC ACT GTTTTGAG GTTGTGGATAGAACT TERM 1865 1518945 - 1518963 + r 78 -10.4 -2.61383 | opp_overlap 1518944, overlap 1518922 1518944 AACTGACGAAGTCAG CTCAAAAC ACT GTTTTGAG GTTGTGGATAGAACT TERM 1866 1519013 - 1518985 - R 73 -8.9 -3.24425 | overlap 1518977 1518997 GATAGAACTGACGAA GTCAGCTCAAAAC ACC GTTTTGAGGTGGC AGATAGAACTGACGA TERM 1867 1519034 - 1519022 - R 71 -7.7 -3.58905 | AGGTGGCAGATAGAA CTGAC GAA GTCAG TAACATATATACGGC TERM 1868 1519375 - 1519336 - R 89 -8.8 -4.4648 | opp_overlap 1519336 1519334 ATTTCTATGATAAAA CGCATAGTATCAAG TTTTCTTAATCC CCTGATACTATGCG TGTTTGTAATTTTTA axe1 1520396 - 1519416 - | acetyl xylan esterase, putative TERM 1869 1520091 - 1520072 - G 79 -8.6 -3.9693 | overlap 1520083 CATCCATGGAAACAA CACCGTAA CCAG CTACGGTG AAGCCCAGCATGTCG TERM 1870 1520374 - 1520388 + g 80 -6.4 -4.7373 | TAGGTCTTAATTTCT TCTAGC AAA GCTGGA TTTTTCATAGCATGC TERM 1871 1520552 - 1520540 - R 79 -5.5 -5.04601 | opp_overlap 1520533 1520538 1520540, overlap 1520533 TTTAGAAACGAAAAA GAGCA TTT CGCTC TCTCTTCTGTTTATA TERM 1872 1520720 - 1520685 - R 72 -4.8 -4.81851 | opp_overlap 1520685 AGCCAAACCTAAAAA CTAGCTTAAGTTTTCC TTAG AGAAAGCTTAATCCAG ATGTTCTTTCTTTTC recG 1522727 - 1520712 - | ATP-dependent DNA helicase RecG alr 1523870 - 1522746 - | alanine racemase acpS 1524201 - 1523839 - | 4'-phosphopantetheinyl transferase TERM 1873 1524234 - 1524213 - R 100 -10.9 -4.26076 | opp_overlap 1524212 1524210 TCATTCTCATCAAAA GGAGTTGAG ATTC CCCAACTCC ATCCTTTTCACTTAT aroF 1525277 - 1524246 - | phospho-2-dehydro-3-deoxyheptonate aldolase aroG 1526310 - 1525279 - | phospho-2-dehydro-3-deoxyheptonate aldolase TERM 1874 1526372 - 1526334 - R 81 -8.3 -4.13995 | opp_overlap 1526344 TCCTTATAAAGCAAA CGGATACCCAGTAAAAA TTTAC TTTTCACAAGATATCCG CCTCTAAACTATCTC secA 1528904 - 1526391 - | preprotein translocase subunit SecA TERM 1875 1528415 - 1528427 + g 70 -7.7 -3.73072 | CATAGGCTTCTTTTT TCTCC ATT GGAGA TTTGGTAGCCAAGTT TERM 1876 1529031 - 1529008 - R 90 -8.2 -5.0925 | opp_overlap 1529006 1529002 1529010 TTTGAAAAGGAAAAA GAGGTTAGTT TCCA AGCTAACCTC TCTGACTTTTATGAT spr1545 1529250 - 1529050 - | hypothetical protein ABC-NBD 1530000 - 1529350 - | ABC transporter ATP-binding protein spr1547 1530681 - 1530004 - | hypothetical protein spr1548 1531429 - 1530638 - | hypothetical protein TERM 1877 1531405 - 1531378 - GR 91 -12.2 -3.71205 | overlap 1531374 1531395 GAAAAAGCAAAGTAA GCAAGACATAAA CAAA TTTATGCCTTGC AAAAGTTAAGAGAGG spr1549 1531843 - 1531451 - | hypothetical protein TERM 1878 1532114 - 1532142 + H 70 -8.4 -3.18155 | ATAATAATACCACCT TTTTCTACGTTT TTTAT AAATGTAGAAAA TATTCACATTTTTCT spr1550 1532170 - 1533021 + | hypothetical protein TERM 1879 1533196 - 1533238 + T 74 -3 -5.30155 | gap 1, opp_overlap 1533196 TAATCAAAATAAAAA TGACTGTATCTATAGCT CCATAAACAA ATC-ATAGATACAGTCA TTTTTTAGTTCCTAC TERM 1880 1533238 - 1533196 - T 86 -5.8 -5.54338 | opp_overlap 1533196 TAATCAAAATAAAAA TGACTGTATCTATAGCTC CATAAAC AAATCATAGATACAGTCA TTTTTTAGTTCCTAC spr1551 1533596 - 1533243 - | hypothetical protein spr1552 1534077 - 1533733 - | hypothetical protein TERM 1881 1534146 - 1534127 - R 86 -5 -5.59357 | opp_overlap 1534127 ATTATATCAAAAAAA TCCGGAAC TGTC ATTCCAGA TTCTACTTTTTTATT engA 1535467 - 1534157 - | GTP-binding protein EngA frp 1536194 - 1535481 - | nitroreductase family protein dnaI 1537087 - 1536191 - | primosomal protein DnaI TERM 1882 1536487 - 1536503 + g 71 -5.1 -4.62783 | opp_overlap 1536486 CCAAGGTCTTAACAT TGCCATC ACT GATAGCA TTTTTGACATCAATG TERM 1883 1536742 - 1536729 - G 73 -2.4 -5.18561 | overlap 1536721 TAAACATCTAAAAAA CTGA CATTTT TCAG GCTAGATGGAAAATT dnaB 1538257 - 1537088 - | hypothetical protein TERM 1884 1537496 - 1537506 + g 81 -6.8 -4.69549 | opp_overlap 1537496 GATTTCTGCCAAGAA CTGC AGG GCAG TTTTACTTTTGGCTT TERM 1885 1538192 - 1538149 - G 85 -8.8 -4.40003 | gap 1 TCGTATAAAGATAAA GGCTCAGTGCCTCCTGACCGA TAA TCGGG-AGGTAGCACTGTACC AGAGATGAGGTATCT spr1557 1538731 - 1538258 - | transcriptional regulator NrdR spr1558 1538871 - 1539236 + | hypothetical protein ABC-NBD 1539214 - 1539936 + | ABC transporter ATP-binding protein - unknown substrate spr1560 1539872 - 1540720 + | hypothetical protein TERM 1886 1540872 - 1540818 - T 100 -29.8 -3.04501 | overlap 1540822 ATCAAGTGTTGAATA TGAACTGCCCCCCAAAAGTTAGAC AGAAAAA ATCTAACTTTTGGGGGGCAGTTCA AAAAATCCTTGATAT TERM 1887 1540868 - 1540822 - T 100 -24.8 -3.36452 | overlap 1540818 AGTGTTGAATATGAA CTGCCCCCCAAAAGTTAGAC AGAAAAA ATCTAACTTTTGGGGGGCAG TTCAAAAAATCCTTG TERM 1888 1541127 - 1541112 - T 76 -6.8 -4.59773 | opp_overlap 1541112 1541116 TTTCACCTTTAAAAA CCTCGC TTTC GCAAGG CTCTTCTATTTATAA natB 1542332 - 1541133 - | hypothetical protein TERM 1889 1541827 - 1541838 + g 81 -3 -5.54338 | overlap 1541834 GCACCTGCTGCAATT GTTT GAAT AAAC TTTTTATTTTCCTTG natA 1543222 - 1542329 - | ABC transporter ATP-binding protein TERM 1890 1543429 - 1543417 - H 82 -7.7 -4.52857 | AGGTTGCAGATAAAA CTGAC GAA GTCAG CTCAAAACACTGTTT TERM 1891 1543430 - 1543448 + H 78 -10.4 -2.61383 | opp_overlap 1543429, overlap 1543429 AACTGACGAAGTCAG CTCAAAAC ACT GTTTTGAG GTTGTGGATAGAACT IS1239-truncation 1543913 - 1544116 + | degenerate transposase TERM 1892 1544770 - 1544788 + G 79 -8.8 -4.03234 | CATTCCAGGGGCCTT GACCTCGG TGG CTGGGGTC TTTATCTACGGGCAC TERM 1893 1544842 - 1544852 + G 71 -6.8 -4.05861 | TATCGGCATCGTGAT TGGC TGT GCCA TTATCTTTTATCTAG spr1564 1544531 - 1545148 + | hypothetical protein TERM 1894 1545160 - 1545181 + T 80 -7.3 -4.58395 | opp_overlap 1545160 TTGACACGTAAAAAA TCCGTTTGG TTTC CCAAGTGGA TTTTTAAAGCGTAGA TERM 1895 1545322 - 1545297 - T 73 -6.9 -4.03234 | opp_overlap 1545299 1545313, overlap 1545299 CCGCCGTGATAGAAA CACCTGAAATC TAAT GGTTTCAGGTA TTCGGAAACTTTGAG TERM 1896 1545299 - 1545320 + T 74 -9.5 -3.03635 | opp_overlap 1545297 1545299, overlap 1545313 GCCGTGATAGAAACA CCTGAAATC TAAT GGTTTCAGG TATTCGGAAACTTTG TERM 1897 1545331 - 1545352 + T 70 -7.3 -3.71645 | opp_overlap 1545331 TCAGGTATTCGGAAA CTTTGAGAC ACTA GGCTCAAAG TTTAGGTATGGAATT TERM 1898 1545429 - 1545466 + T 100 -16.5 -4.66535 | opp_overlap 1545432 1545437, overlap 1545430 1545437 AAATATTGTTTTCAA CCACAAAATCCGTTTGG TTTC CCAAGCGGATTTTGTGC TTTATTTTGAAACTT TERM 1899 1545430 - 1545465 + T 100 -20 -3.38836 | opp_overlap 1545432 1545437, overlap 1545429 1545437 AATATTGTTTTCAAC CACAAAATCCGTTTGG TTTC CCAAGCGGATTTTGTG CTTTATTTTGAAACT TERM 1900 1545463 - 1545432 - T 95 -14.6 -2.71144 | opp_overlap 1545430 1545429 1545437, overlap 1545437 TATTGTTTTCAACCA CAAAATCCGTTTGG TTTC CCAAGCGGATTTTG TGCTTTATTTTGAAA TERM 1901 1545458 - 1545437 - T 89 -8.7 -4.5442 | opp_overlap 1545430 1545429 1545437, overlap 1545432 TTTTCAACCACAAAA TCCGTTTGG TTTC CCAAGCGGA TTTTGTGCTTTATTT TERM 1902 1545437 - 1545458 + T 100 -10.9 -4.68612 | opp_overlap 1545437 1545432, overlap 1545430 1545429 TTTTCAACCACAAAA TCCGTTTGG TTTC CCAAGCGGA TTTTGTGCTTTATTT scrK 1546355 - 1545468 - | fructokinase TERM 1903 1546487 - 1546453 - R 83 -11 -3.10012 | opp_overlap 1546459, overlap 1546459 AATCTTACTATCTAA TAAAAACGAACAAACA TGT CATTTGTTCGTTTTCA CATTAGAGAGGATTG TERM 1904 1546459 - 1546481 + r 71 -6.4 -4.19238 | opp_overlap 1546453 1546459 ACTATCTAATAAAAA CGAACAAA CATGTCA TTTGTTCG TTTTCACATTAGAGA TERM 1905 1546481 - 1546459 - R 88 -7.8 -5.11063 | opp_overlap 1546459, overlap 1546453 ACTATCTAATAAAAA CGAACAAACA TGT CATTTGTTCG TTTTCACATTAGAGA scrA 1548387 - 1546504 - | PTS system IIABC components TERM 1906 1546959 - 1546983 + g 72 -3.6 -5.06414 | gap 1, opp_overlap 1546964 CAAGTGTTTCATTTT GAAG-AGCTGC TGGC GCAACTTCTTC TTTTTCTTCAGCCAC scrB 1548764 - 1550218 + | sucrose-6-phosphate hydrolase TERM 1907 1550874 - 1550860 - g 73 -7.2 -3.98952 | GAAAAGAAATGGAAA TCAAGA ATA TCTTGA CCCGGGAAAAACCAG scrR 1550199 - 1551164 + | sucrose operon repressor TERM 1908 1551168 - 1551203 + T 75 -9.9 -2.54586 | opp_overlap 1551171 1551176, overlap 1551176 AAAAGTATTTAAACA CAAGAAAACTCAGAC CGATTC GTCTGAGTTTTTATG ATCTTAAATTTTCGA TERM 1909 1551200 - 1551171 - T 75 -8 -3.84587 | opp_overlap 1551168 1551176, overlap 1551176 AGTATTTAAACACAA GAAAACTCAGAC CGATTC GTCTGAGTTTTT ATGATCTTAAATTTT TERM 1910 1551176 - 1551195 + T 88 -7.9 -4.98436 | opp_overlap 1551171 1551176, overlap 1551168 TTAAACACAAGAAAA CTCAGAC CGATTC GTCTGAG TTTTTATGATCTTAA TERM 1911 1551195 - 1551176 - T 88 -7.9 -4.95302 | opp_overlap 1551176 1551168, overlap 1551171 TTAAACACAAGAAAA CTCAGAC CGATTC GTCTGAG TTTTTATGATCTTAA mvaA 1552473 - 1551199 - | 3-hydroxy-3-methylglutaryl-coenzyme a reductase TERM 1912 1552388 - 1552440 + g 85 -6.6 -5.02074 | gap 3, opp_overlap 1552398 1552399 1552401, overlap 1552399 1552432 AGACTAGCTTGTCTC TCAGGACTAAGGAGCGCCT-GAGCT TTTAGC AGCTCGAGGCGCTC-TTGGTA-TGA TTTTTTAGAAAATCC TERM 1913 1552432 - 1552398 - G 79 -10.8 -3.21099 | gap 1, opp_overlap 1552388 1552399, overlap 1552399 1552401 GTCTCTCAGGACTAA GGAGCGCCT-GAGCT TTTAGC AGCTCGAGGCGCTCT TGGTATGATTTTTTA TERM 1914 1552431 - 1552399 - G 93 -14.3 -2.52516 | gap 1, opp_overlap 1552388 1552399, overlap 1552398 1552401 TCTCTCAGGACTAAG GAGCGCCT-GAGCT TTTAGC AGCTCGAGGCGCTC TTGGTATGATTTTTT TERM 1915 1552399 - 1552431 + g 100 -14.3 -3.40042 | gap 1, opp_overlap 1552399 1552398 1552401, overlap 1552388 TCTCTCAGGACTAAG GAGCGCCT-GAGCT TTTAGC AGCTCGAGGCGCTC TTGGTATGATTTTTT TERM 1916 1552429 - 1552401 - G 77 -11.1 -2.80016 | gap 1, opp_overlap 1552399 1552388, overlap 1552399 1552398 TCTCAGGACTAAGGA GCGCCT-GAGCT TTTAGC AGCTCGAGGCGC TCTTGGTATGATTTT mvaS 1553669 - 1552473 - | hydroxymethylglutaryl-CoA synthase TERM 1917 1553747 - 1553725 - R 93 -7.8 -5.53079 | opp_overlap 1553725 1553723 AAAAGAGAGAAAAAA GACTTGATTC ACC AAATCAAGCC TCTTATTGGTCATCA spr1572 1554063 - 1553776 - | hypothetical protein IS1381 1554481 - 1554092 - | tranposase (orf2) TERM 1918 1554150 - 1554192 + g 95 -11.6 -4.98531 | overlap 1554137 ATTCGTAATCCGAAG CGTTTACGATGATTTCGATA GGT TGTTGAAATCATTTTAAACG TTTTTACTTTGGCAA IS1381-truncation 1554715 - 1554515 - | degenerate transposase (orf1) spr1575 1555229 - 1554780 - | hypothetical protein TERM 1919 1554883 - 1554896 + g 76 -6.7 -4.35483 | opp_overlap 1554876 ATGACAACCAAGGTC GCACT TGCC AGTGC TTTATTATAGTCCCC spr1576 1555989 - 1555231 - | hypothetical protein TERM 1920 1556072 - 1556047 - R 100 -11.3 -5.81412 | opp_overlap 1556047 TGGACTCAAAAAAAA TCTTTGCCATG AAAT CATGACAAAGA TTGATTACTCATTTT TERM 1921 1556047 - 1556072 + r 79 -9.1 -3.44825 | opp_overlap 1556047 TGGACTCAAAAAAAA TCTTTGCCATG AAAT CATGACAAAGA TTGATTACTCATTTT pkn2 1558083 - 1556104 - | serine/threonine protein kinase TERM 1922 1556277 - 1556293 + g 70 -8.1 -3.7282 | opp_overlap 1556280, overlap 1556280 CTTCCTTAATCCCAA CAATTTG AAT CAAATTG TTCTTAGTAAACTCC pppL 1558820 - 1558080 - | phosphatase, putative sunL 1560151 - 1558835 - | rRNA methylase fmt 1561076 - 1560141 - | methionyl-tRNA formyltransferase TERM 1923 1560482 - 1560506 + g 71 -7.1 -3.83026 | opp_overlap 1560482 TTGGAGAGAAGGTAA CCTGACTCGTA TCC TGCGGTTCAGG TTTGATATCACCAGC priA 1563485 - 1561089 - | primosome assembly protein PriA TERM 1924 1563553 - 1563530 - R 87 -6.8 -5.47159 | opp_overlap 1563530 TTGCAATAGAAAAAA TAAGATTGAG TCCC CCCAACCTTA AATTTTTTCACCATC spr1582 1563865 - 1563551 - | DNA-directed RNA polymerase subunit omega gmk 1564516 - 1563890 - | guanylate kinase spr1584 1566259 - 1564646 - | hypothetical protein TERM 1925 1566334 - 1566324 - R 82 -5.4 -5.31275 | TTCTACCATAAAAAA GTGA TTT TCAC AAACCTAAAATAGAA TERM 1926 1566449 - 1566432 - R 83 -6.3 -4.8667 | opp_overlap 1566432 GAGACTTGAGAAAAA GCCTACT TTAC AGTAGAC TTAGTAATGATCTTT spr1585 1566704 - 1566450 - | hypothetical protein spr1586 1567001 - 1566708 - | hypothetical protein TERM 1927 1567199 - 1567182 - R 70 -4.1 -4.77925 | AAAAAATCTCAAAAA GCCTACC TTTC AGTAGAC TTAGTTTGTTTCTAT spr1587 1568297 - 1567200 - | hypothetical protein spr1588 1569053 - 1568307 - | hypothetical protein TERM 1928 1569147 - 1569128 - R 89 -8.6 -4.63748 | opp_overlap 1569128 AAATAAGCAAAGAAA CCCAGTTG ACTA CAACTGAG TTCATCTTCTAAGCA spr1589 1569509 - 1569156 - | iojap-related protein spr1590 1570022 - 1569522 - | isochorismatase family protein spr1591 1570616 - 1570023 - | hypothetical protein nadD 1571245 - 1570616 - | nicotinic acid mononucleotide adenylyltransferase TERM 1929 1570715 - 1570697 - G 70 -8.8 -3.33815 | ACCTTGGGCAAGGAA GTCCCGCA CCA TGCTGGAC GAGATATCCATGAGC spr1593 1571608 - 1571297 - | hypothetical protein TERM 1930 1571712 - 1571693 - R 72 -5.8 -4.30576 | gap 1, opp_overlap 1571693 CTTTCATGACTAAAA TTTGAG-CC TAA GGTCTCAAA TTTTCCGCAGTTGGT spr1594 1572929 - 1571823 - | GTP-binding protein YqeH TERM 1931 1571853 - 1571879 + g 95 -12.2 -4.36262 | overlap 1571842 1571855 TCGTGTGACGACGGC GACGCCTTCTGG TGC CCAGACGGCGAC TTTTGCTATGCCTGT TERM 1932 1571855 - 1571877 + g 90 -13.4 -2.52138 | overlap 1571842 1571853 GTGTGACGACGGCGA CGCCTTCTGG TGC CCAGACGGCG ACTTTTGCTATGCCT spr1595 1573522 - 1572932 - | hypothetical protein TERM 1933 1573225 - 1573237 + gr 76 -3.3 -5.31545 | CAAATTTCTCAACTG CTCGT TGA ACGCG TTTTTTGGTGTTATT corA 1574370 - 1573474 - | CorA - magnesium and cobalt transporter spr1597 1575032 - 1574427 - | hypothetical protein TERM 1934 1576147 - 1576159 + G 79 -9.1 -3.8062 | overlap 1576133 GCTTCAGGTATTGCC GGAGG TTC CCTCC TTCTTATCCCAGTTG dctA 1575376 - 1576335 + | dicarboxylate/amino acid:cation (Na+ or H+) symporter spr1599 1576403 - 1577356 + | hypothetical protein TERM 1935 1577570 - 1577555 - g 73 -7.6 -3.97446 | AGAAAGAAATTGAAA GTCTCT TGGA AGAGAC CATTGCCCAACAGAG spr1600 1577455 - 1577880 + | transcriptional regulator spr1601 1577898 - 1578200 + | hypothetical protein trxA 1578217 - 1578531 + | thioredoxin TERM 1936 1578540 - 1578564 + F 93 -7.9 -5.4756 | opp_overlap 1578540 1578542 GAGCTAATCAAACGA GAGACCAAGTA CTT TCTTTGGTCTC TTTTTTCTTGCCCTT TERM 1937 1578778 - 1578793 + F 100 -10.4 -4.69664 | ATTTGGTATTTTTTA GCTCCC TAAT GGGAGC TTTTTGCGTGCTCTG spr1603 1578797 - 1579369 + | 7-cyano-7-deazaguanine reductase TERM 1938 1579466 - 1579454 - T 73 -7.7 -3.83205 | AGGTTGTAGATGAAA CTGAC GAA GTCAG CTTAAAACACTGTTT TERM 1939 1579511 - 1579499 - T 71 -7.7 -3.58905 | AGGTTGCAGATAGAA CTGAC GAA GTCAG ATCAAAACACTGTTT TERM 1940 1579556 - 1579544 - T 71 -7.7 -3.58905 | AGGTTGCAGATAGAA CTGAC GAA GTCAG CTTAAAACACTGTTT TERM 1941 1579601 - 1579589 - T 71 -7.7 -3.58905 | AGGTTGCAGATAGAA CTGAC GAA GTCAG CTTAAAACACTGTTT TERM 1942 1579646 - 1579634 - T 71 -7.7 -3.58905 | AGGTTGCAGATAGAA CTGAC GAA GTCAG ATCAAAACACTGTTT TERM 1943 1579806 - 1579834 + T 100 -13.9 -4.81851 | opp_overlap 1579806 GTATCATACGAAAAA GCCCTGTTCCTCA AGA TGAGGAGCAAGGC TTTTTGAGTTTCAAT TERM 1944 1579834 - 1579806 - T 100 -13.9 -4.82667 | opp_overlap 1579806 GTATCATACGAAAAA GCCCTGTTCCTCA AGA TGAGGAGCAAGGC TTTTTGAGTTTCAAT aqpZ 1580517 - 1579849 - | aquaporin TERM 1945 1580551 - 1580541 - R 71 -5.4 -4.56597 | opp_overlap 1580541 TCCTTTTTTCAAAAA CTAG ATA CTAG TCTATCAAAAGTAGG spr1605 1581188 - 1580628 - | hypothetical protein pepF 1583224 - 1581428 - | oligoendopeptidase F, putative TERM 1946 1582782 - 1582798 + g 86 -4.4 -5.46698 | gap 1 GCCTTCTCCACATCT GCCC-CT AAGT AGTGGGC TTTTTTGATTTTAGC spr1607 1583990 - 1583235 - | hypothetical protein prmA 1584930 - 1583980 - | ribosomal protein L11 methyltransferase mutT 1585496 - 1585068 - | MutT/nudix family protein spr1610 1586580 - 1585462 - | hypothetical protein spr1611 1587054 - 1586584 - | hypothetical protein TERM 1947 1586709 - 1586698 - G 73 -5.8 -4.56597 | TGGGTCTTCCAAAAA GTCC ATGA GGAC ATCTAGCCCAACCTC TERM 1948 1587169 - 1587193 + r 70 -4.3 -4.65078 | overlap 1587192 TTATACCATATTACC TCATTTAAACC CTT GGTATCAATGA TTTTCTTAAAAGTCT TERM 1949 1587257 - 1587244 - R 79 -5.2 -5.16206 | AAATCAATATAAAAA GCCC GCGAAA GGGC TAATAAATCTATAAA spr1612 1587797 - 1587345 - | hypothetical protein spr1613 1588040 - 1587834 - | hypothetical protein spr1614 1588329 - 1588150 - | hypothetical protein spr1615 1588733 - 1588494 - | hypothetical protein cshA 1589003 - 1590274 + | recombination factor protein RarA TERM 1950 1590631 - 1590647 + T 84 -3.7 -5.64006 | overlap 1590622 AATACAACAGGAAAA GTCTTAT AAT ATAGGGC TTTTTTTGCTTAAAT TERM 1951 1590792 - 1590763 - T 90 -8 -5.28983 | opp_overlap 1590763 CCCAAAACACAAAAA GTCCTCTTTCCA CTATTT TAGAAAGAGAAC TTTTTCTTTAGGAGA TERM 1952 1590763 - 1590792 + T 76 -3.6 -5.27335 | opp_overlap 1590763 CCCAAAACACAAAAA GTCCTCTTTCCA CTATTT TAGAAAGAGAAC TTTTTCTTTAGGAGA sacA 1592140 - 1590821 - | sucrose-6-phosphate hydrolase, putative TERM 1953 1591688 - 1591703 + g 73 -7.6 -4.11773 | overlap 1591702 ATCTGGCAAGTCTGA TCCAGT TGCA ACTGGA TTTTGGGAAATCTTT TERM 1954 1591763 - 1591773 + g 76 -2.4 -5.49234 | CATATTTTGCACTTG GCGG ACA CCGG TTTTTTCTTCGATAT ABC-MSP 1593004 - 1592150 - | ABC transporter membrane-spanning permease - sugar transport TERM 1955 1592236 - 1592221 - G 78 -7.6 -4.41353 | CTACATAGACCAAAA TCAACG GAAT CGTTGA AATAGTTAATACAGC ABC-MSP 1593905 - 1592997 - | ABC transporter membrane-spanning permease - sugar transporter ABC-SBP 1595308 - 1593995 - | ABC transporter substrate-binding protein - sugar transport TERM 1956 1595321 - 1595332 + r 89 -3 -5.88476 | CATTTTCCTCCTTTT TGAA ACGT TTCA TTTTTTATTTATTTT scrR 1596445 - 1595432 - | sucrose operon repressor (scr operon regulatory protein) TERM 1957 1596594 - 1596609 + r 79 -4.6 -5.27399 | opp_overlap 1596594 1596589 CATAAAACAGGAAAA GCCTTG GTTT CATGGC TTTTTTCATATCTTC TERM 1958 1596749 - 1596709 - R 77 -4.9 -5.06414 | opp_overlap 1596713 1596720, overlap 1596711 TTTTCTTAACAAAAA CACCCTAAAAATTAGAC TTTTTCT GTCTAACTTTTGAGGTA CAGTTCAAACGCGAA spr1622 1598327 - 1596789 - | hypothetical protein TERM 1959 1597837 - 1597815 - G 70 -2.6 -5.02476 | opp_overlap 1597831 ATATTGTGCAAAAAA GTAACGAATG TCT CTCTCGTTTC CAATGATTTGAACAG spr1623 1598954 - 1599526 + | hypothetical protein TERM 1960 1599515 - 1599505 - f 84 -5.4 -5.46706 | ACCTCAAAACAAAAA GACT GTT AGTC GTGTGAAGTAAGGAA spr1624 1599538 - 1599708 + | hypothetical protein spr1625 1599747 - 1600355 + | general stress protein 24, putative spr1626 1600386 - 1600589 + | hypothetical protein TERM 1961 1600666 - 1600695 + T 88 -7.3 -5.10154 | gap 1, opp_overlap 1600666 CTCAGAAAACAAAAA GCTAGAGATTCC CAATTGC GGAA-CTCTAGC TTTTTAATTTTGCCT TERM 1962 1600695 - 1600666 - T 93 -7.3 -5.54907 | gap 1, opp_overlap 1600666 CTCAGAAAACAAAAA GCTAGAGATTCC CAATTGC GGAA-CTCTAGC TTTTTAATTTTGCCT spr1627 1601562 - 1601116 - | hypothetical protein TERM 1963 1601166 - 1601184 + g 72 -4.6 -4.73388 | opp_overlap 1601163, overlap 1601143 1601163 1601183 GTGCTTCAACCATTT GAACGATT TCA AATCCTTC TTTTTGGTAAAGATT TERM 1964 1602227 - 1602216 - g 86 -4.4 -5.45802 | opp_overlap 1602216, overlap 1602217 CCTGCAAAAGAAAAA GGAA AGAC TTCC TTTCGTGCCTTTCCT pilD 1601632 - 1602291 + | type IV prepilin peptidase, putative spr1629 1603494 - 1602343 - | transcriptional regulator TERM 1965 1602819 - 1602794 - G 86 -4.7 -5.4505 | opp_overlap 1602800, overlap 1602797 TTTGGCAATAAAAAA CATGATGCAAA ATAA TTTGCTTCTTG CTCCAAACGATCGCC spr1630 1604240 - 1603509 - | hypothetical protein TERM 1966 1603752 - 1603764 + g 80 -6.3 -4.77759 | TAAAATCATAAATTT TTCGA TAT TCGAA TTTTTAGTAGCTTGT TERM 1967 1604506 - 1604495 - R 82 -4.4 -5.45802 | opp_overlap 1604495, overlap 1604473 1604472 1604469 1604496 CCTGCAAAAGAAAAA GGAA AGAC TTCC TTTCGTGCCTTTCCT trpA 1605318 - 1604542 - | tryptophan synthase subunit alpha TERM 1968 1604586 - 1604604 + g 91 -10.3 -4.55826 | TAAAGTCCTGAATCG GCTCTCC TTGGT GGAGAGC TTTTACTATTTTCGA trpB 1606534 - 1605311 - | tryptophan synthase subunit beta TERM 1969 1606307 - 1606334 + g 81 -5.5 -5.1101 | CCGTTTGAGATAAAT CTTGGCTCCGC CGATAT GCTGGGTCAAG TTTTTTGCGTAGTAA trpF 1607141 - 1606512 - | N-(5'-phosphoribosyl)anthranilate isomerase TERM 1970 1607044 - 1607032 - GR 74 -4.8 -4.78848 | GGTGCAAAGACAAAA CCGA TATAG TCGG CTCCTGCTGAAACGG trpC 1607865 - 1607098 - | indole-3-glycerol-phosphate synthase TERM 1971 1607787 - 1607803 + gr 70 -8 -3.29471 | AGGTCTGGCGCAGAG GCTGGA TTTGC TCCAGC TTCATCTGCTCCACC trpD 1608866 - 1607862 - | anthranilate phosphoribosyltransferase TERM 1972 1608375 - 1608350 - G 70 -8.5 -3.36968 | gap 1 CAGTCAAGTTCATAA TCGT-TGGAATT CCC AATTCCAAACGA GCTGGCATGATGTAT trpG 1609443 - 1608877 - | anthranilate synthase component II trpE 1610903 - 1609440 - | anthranilate synthase component I TERM 1973 1610880 - 1610853 - G 100 -12.8 -4.7373 | CGACTGTATGAAAAA TCCCCACGCAAA ATAA CTTGCGTGAGGA CGAAATTCGCGGTGC spr1638 1611091 - 1610936 - | hypothetical protein TERM 1974 1611250 - 1611262 + r 71 -7.7 -3.58905 | CCGTAGGTATGGTTA CTGAC TTC GTCAG TTCTATCTGCAACCT TERM 1975 1611339 - 1611321 - R 78 -10.4 -2.61383 | overlap 1611320 AGTTCTATCCACAAC CTCAAAAC AGT GTTTTGAG CAGCCTGCGGCTAGT TERM 1976 1611522 - 1611556 + r 71 -8.5 -3.14564 | opp_overlap 1611523 CGACGGATAGAAAAA AGCCCACACACAGAA TATAC TTCCGTGTGAGGGCG TTGGTAACGCGGTGC TERM 1977 1611555 - 1611523 - R 100 -14.2 -5.38047 | opp_overlap 1611522 GACGGATAGAAAAAA GCCCACACACAGAA TATAC TTCCGTGTGAGGGC GTTGGTAACGCGGTG TERM 1978 1611601 - 1611583 - R 78 -10.4 -2.73364 | opp_overlap 1611581 1611587, overlap 1611587 GTGCCACCTCAATTA TAAAGGGA CTA TCCCTTTA CATCTCTGCCTTGTT ccpA 1612989 - 1611988 - | catabolite control protein spr1640 1613465 - 1613097 - | hypothetical protein TERM 1979 1613282 - 1613296 + g 81 -2.9 -5.63517 | TGTCAATGTAACATT TTAAC ATAGA GTTAA TTTTTTCTTTAAAGA TERM 1980 1613517 - 1613497 - RH 74 -5.5 -4.69027 | AAATCTACTCAAAAA TTAGATGAT TAA AACATCTAA AAAACAAAAGGACAA TERM 1981 1613549 - 1613522 - RH 100 -10 -5.19916 | opp_overlap 1613522, overlap 1613527 AAAACATCTAAAAAA CAAAAGGACAAA AACA TCTGTCCCTTTG TTTACTAAATTTCAG TERM 1982 1613544 - 1613527 - RH 87 -6.3 -5.43553 | opp_overlap 1613522, overlap 1613522 ATCTAAAAAACAAAA GGACAAA AACA TCTGTCC CTTTGTTTACTAAAT mgtC 1614271 - 1613561 - | Mg2+ transporter spr1642 1614153 - 1614308 + | hypothetical protein ABC-MSP 1615965 - 1614274 - | ABC transporter permease TERM 1983 1614564 - 1614554 - G 84 -6.8 -4.95758 | ATCATAGTATAAAAA GGTG AAG CACC CATACTTCTTGCTGC ABC-NBD 1616987 - 1615977 - | ABC transporter ATP-binding protein - unknown substrate ABC-SBP 1618157 - 1617090 - | ABC transporter substrate-binding protein spr1646 1618841 - 1618182 - | hypothetical protein galE 1620031 - 1619051 - | UDP-glucose 4-epimerase galT 1621519 - 1620044 - | galactose-1-phosphate uridylyltransferase spr1649 1622173 - 1621532 - | phosphate transporter PhoU TERM 1984 1621819 - 1621833 + g 72 -4.4 -4.6635 | CTTCATGAAGTATTT TTATTT CTG AAATAA TTTTCTTCAAAATTT spr1650 1622725 - 1622231 - | hypothetical protein spr1651 1623082 - 1622786 - | hypothetical protein spr1652 1625225 - 1623066 - | cell wall surface anchor family protein TERM 1985 1625395 - 1625407 + H 71 -7.7 -3.54951 | overlap 1625381 CCTAAGTCTAGGTTA CTGAC TTG GTCAG TTCTATAGTAGACTG TERM 1986 1625832 - 1625816 - H 75 -5.1 -4.8543 | TAACCTCGATAAAAA TAGATGC AGT GCTTCTA AAATACTGGAATAGG TERM 1987 1626085 - 1626046 - H 100 -8.7 -6.34616 | opp_overlap 1626046 TGAAAACAAAAAAAA GACGCTAGTTTCCACAA TCTCAC TCATGGAAACTCACGTC TTTCAAAAAATAGGG TERM 1988 1626254 - 1626233 - g 71 -3.7 -4.90296 | overlap 1626234 1626235 AAAATCCTATAAAAA TTCTCTCTC TGAG GAGAAAGAG GCCTCAACTACAGGT spr1653 1626138 - 1626314 + | hypothetical protein spr1654 1627609 - 1626356 - | capsular polysaccharide biosynthesis protein, putative TERM 1989 1626722 - 1626708 - G 71 -6.4 -4.1585 | CGAGAACCTGCAAAA CCACTA TCA TAGCGG TCCACAATGTCCTTA spr1655 1628356 - 1627625 - | glycosyl transferase, putative TERM 1990 1628012 - 1628029 + g 78 -4.1 -5.252 | opp_overlap 1627998, overlap 1628013 ACGGCTATCGTTAGC AGAAGTC ACCA GACTTCC TTTTTTATCCGCATC ABC-N/P 1630241 - 1628490 - | ABC transporter permease/ATP-binding protein TERM 1991 1628901 - 1628889 - G 79 -9.1 -3.92075 | overlap 1628876 ATCTGCATCCACAAA GGCTG CCG CAGCC TGAACCTGCTCATCA ABC-N/P 1632015 - 1630231 - | ABC transporter permease/ATP-binding protein TERM 1992 1632062 - 1632082 + r 72 -8.3 -3.35996 | overlap 1632055 1632063 AACTAGCCGCAGGCT GCTCAAAGC ACT GCTTTGAGG TTGTAGATAGAACTG TERM 1993 1632063 - 1632081 + r 84 -11.8 -2.61383 | overlap 1632055 1632062 ACTAGCCGCAGGCTG CTCAAAGC ACT GCTTTGAG GTTGTAGATAGAACT TERM 1994 1632107 - 1632095 - R 71 -7.7 -3.58905 | AGGTTGTAGATAGAA CTGAC GAA GTCAG TAACCTACATACGGC spr1658 1632634 - 1632104 - | hypothetical protein spr1659 1632900 - 1632631 - | hypothetical protein TERM 1995 1633470 - 1633482 + G 73 -7.7 -3.85698 | CGTAAAGGCTATGCT GGAAC CAT GTTCC TTTATAAGAAAGAAC TERM 1996 1633717 - 1633701 - g 89 -5.8 -5.42975 | CTAGACAAAGAAAAA CCAGTC CTTGC GACCGG TGACTACAACGTAGC exoA 1633221 - 1634048 + | exodeoxyribonuclease spr1661 1634203 - 1634442 + | hypothetical protein TERM 1997 1634482 - 1634519 + F 93 -9.3 -4.46212 | opp_overlap 1634482 TTAAAGTTAGAAAAA GGCATATTGTCAGGTGT CTAA AAACTTGATAGTATGCC TTTTATGATGGAAAA TERM 1998 1634608 - 1634665 + F 100 -14.5 -4.05229 | gap 1, opp_overlap 1634602 1634627, overlap 1634603 1634616 1634617 TATATGATACTGACT CTGTCAATTCTATCCACAACCTCAAAAC AGT GTTTTGAGGTTGTGGATAGC-TTCCTAG TTTGCTCTTTGATTT TERM 1999 1634616 - 1634658 + F 100 -23.8 -3.34629 | opp_overlap 1634627, overlap 1634608 1634617 ACTGACTCTGTCAAT TCTATCCACAACCTCAAAAC AGT GTTTTGAGGTTGTGGATAGC TTCCTAGTTTGCTCT TERM 2000 1634617 - 1634657 + F 100 -27.3 -2.60054 | opp_overlap 1634627, overlap 1634616 1634608 CTGACTCTGTCAATT CTATCCACAACCTCAAAAC AGT GTTTTGAGGTTGTGGATAG CTTCCTAGTTTGCTC TERM 2001 1634647 - 1634627 - f 93 -12.7 -3.36803 | opp_overlap 1634617 1634616 1634608 CAATTCTATCCACAA CCTCAAAAC AGT GTTTTGAGG TTGTGGATAGCTTCC TERM 2002 1634951 - 1634975 + F 95 -8.7 -5.19916 | CATGTCTATTTAGGG GACTTACTTAG AGA TTAAGTAGGTC TTTTTTGAATATTTT TERM 2003 1635130 - 1635116 - f 75 -7.2 -4.13945 | opp_overlap 1635116 AGGCTTAGGCTAAAA TAGTTC CCC GAACTA TTTTACTCTCAAAAA TERM 2004 1635116 - 1635130 + F 78 -7.2 -4.34402 | opp_overlap 1635116 AGGCTTAGGCTAAAA TAGTTC CCC GAACTA TTTTACTCTCAAAAA xpt 1635320 - 1635901 + | xanthine phosphoribosyltransferase pbuX 1635901 - 1637163 + | xanthine permease TERM 2005 1637183 - 1637170 - T 79 -3.8 -5.44198 | opp_overlap 1637170, overlap 1637164 AAGAAATAAGAAAAA GAGG TGCGAG CCTC TTTTTTGTGTGACAA TERM 2006 1637170 - 1637183 + T 79 -4.5 -5.36441 | opp_overlap 1637170 1637164 AAGAAATAAGAAAAA GAGGT GCGA GCCTC TTTTTTGTGTGACAA dpnD 1637675 - 1637214 - | hypothetical protein dpnC 1638436 - 1637672 - | Type II restriction enzyme DpnI (dpnC) TERM 2007 1638609 - 1638584 - R 100 -11.3 -5.04601 | opp_overlap 1638583 1638582 1638584 CTCATAAATTAAAAA TGAGTGAGATA AATT TATCCCACTCA CCTTTCTTTATATAC TERM 2008 1638584 - 1638609 + r 72 -9.1 -2.61322 | opp_overlap 1638584, overlap 1638583 1638582 CTCATAAATTAAAAA TGAGTGAGATA AATT TATCCCACTCA CCTTTCTTTATATAC spr1666 1639042 - 1638617 - | hypothetical protein galT 1640572 - 1639091 - | galactose-1-phosphate uridylyltransferase TERM 2009 1639208 - 1639228 + g 86 -4.7 -5.38958 | opp_overlap 1639208 GATAGCACCCACAGA GTCCTTG ACGATTG CAAGGGC TTTTTCTTTATCCGT TERM 2010 1640005 - 1639995 - G 73 -6.8 -4.17023 | opp_overlap 1639994, overlap 1639984 CCAACCATTTCAAAA CGGA TAA TCCG GTGGTTGCTGCGAGC galK 1641769 - 1640591 - | galactokinase TERM 2011 1642219 - 1642201 - g 82 -3.8 -5.49569 | overlap 1642203 TAGGAATAGAAAAAA GAGCCCAA GAG TTGGACTA CGATATCTTGCGCTA TERM 2012 1642217 - 1642203 - g 74 -6.4 -4.36863 | overlap 1642201 GGAATAGAAAAAAGA GCCCAA GAG TTGGAC TACGATATCTTGCGC galR 1641933 - 1642940 + | regulator of gal operon GalR TERM 2013 1642981 - 1642955 - T 93 -7.5 -5.5208 | gap 1, opp_overlap 1642955 GGATAACATAAAAAA CGAATA-GAGTT CTAA AACTCCTATTCG TTTTTTATTCGATTA TERM 2014 1642955 - 1642981 + T 93 -7.5 -5.5074 | gap 1, opp_overlap 1642955 GGATAACATAAAAAA CGAATA-GAGTT CTAA AACTCCTATTCG TTTTTTATTCGATTA adhB 1644023 - 1642986 - | zinc-containing alcohol dehydrogenase spr1671 1644377 - 1644024 - | hypothetical protein czcD 1645520 - 1644621 - | cation efflux system protein spr1673 1645644 - 1646180 + | hypothetical protein TERM 2015 1646270 - 1646243 - T 71 -7.8 -3.62046 | opp_overlap 1646248, overlap 1646248 TTATCTTTTCAACAA CAAAAGAGGACC CGCC GATCCTCTTTTT CATACTATAAATCCT TERM 2016 1646248 - 1646265 + T 74 -5.5 -4.79223 | opp_overlap 1646243 1646248 TTTTCAACAACAAAA GAGGACC CGCC GATCCTC TTTTTCATACTATAA TERM 2017 1646265 - 1646248 - T 88 -7.7 -4.89477 | opp_overlap 1646248, overlap 1646243 TTTTCAACAACAAAA GAGGACC CGCC GATCCTC TTTTTCATACTATAA spr1674 1647156 - 1646347 - | hypothetical protein TERM 2018 1647434 - 1647417 - H 79 -4.1 -5.21709 | opp_overlap 1647417 1647430 1647433 TCTCACATCAAAAAA GCCCA GACGAAAT TGGGC TCTATAATATTTGTA TERM 2019 1647430 - 1647483 + H 100 -9.2 -4.96848 | gap 1, opp_overlap 1647417, overlap 1647417 1647433 AAGCCCAGACGAAAT TGGGCTCTATAATATTTGTAGTGGG TAAAT CCC-CTATGGATATTATGGAGCTTA TTTTTGTGTAGAAAA TERM 2020 1647433 - 1647480 + H 100 -10.9 -4.58943 | gap 1, opp_overlap 1647417, overlap 1647417 1647430 CCCAGACGAAATTGG GCTCTATAATATTTGTAGTGGG TAAAT CCC-CTATGGATATTATGGAGC TTATTTTTGTGTAGA IS1167 1647556 - 1648074 + | transposase TERM 2021 1648275 - 1648289 + F 77 -8.6 -3.6502 | opp_overlap 1648275 AGGCTCAGGCTGAAA CAGTCT CCC AGACTG TTTCACTCCCGAATG TERM 2022 1648289 - 1648275 - f 77 -8.6 -3.57263 | opp_overlap 1648275 AGGCTCAGGCTGAAA CAGTCT CCC AGACTG TTTCACTCCCGAATG TERM 2023 1648863 - 1648841 - g 100 -13.6 -5.27779 | opp_overlap 1648845 CTGAATATCAAAAAA GAAAGGACAA AAT TTGTCCTTTC TCGAGCTTAGCTTTT TERM 2024 1648845 - 1648859 + G 77 -8.6 -3.89614 | opp_overlap 1648841 ATATCAAAAAAGAAA GGACAA AAT TTGTCC TTTCTCGAGCTTAGC IS1167-truncation 1648355 - 1648873 + | degenerate transposase (orf2) proWX 1650502 - 1648982 - | ABC transporter membrane-spanning permease - choline transporter proV 1651223 - 1650495 - | choline transporter TERM 2025 1651190 - 1651206 + g 86 -7.3 -5.10767 | overlap 1651203 AGACATCCTTTTCTG TGTAGCG CAG TGCTACA TTTTTGTATTCAATC spr1679 1652002 - 1651238 - | hypothetical protein spr1680 1652449 - 1652006 - | hypothetical protein TERM 2026 1653138 - 1653111 - R 100 -10.8 -5.26918 | gap 1, opp_overlap 1653111 AGATCTTACAAAAAA TGCTTTGA-TCCA CAA TGGAATCAAAGCA TTTTAAAGAGTTCCT TERM 2027 1653111 - 1653138 + r 100 -10.8 -4.11751 | gap 1, opp_overlap 1653111 AGATCTTACAAAAAA TGCTTTGA-TCCA CAA TGGAATCAAAGCA TTTTAAAGAGTTCCT spr1681 1653436 - 1653131 - | hypothetical protein pepA 1654513 - 1653449 - | glutamyl aminopeptidase galE-truncation 1654914 - 1655615 + | NAD-dependent epimerase/dehydratase family protein TERM 2028 1655757 - 1655746 - f 74 -2.2 -5.40004 | TACTAAATTAAAAAA TCCC ACAC GAGA TTGTTGCTCGACGTG TERM 2029 1656717 - 1656743 + G 72 -10.2 -2.73681 | AACTGGCCCTCTTTC TGGTGGCGCT AACGACA AGCGTCACCA TGATTACCGTGGGTG fatD 1656023 - 1656997 + | iron-compound ABC transporter, permease protein fatC 1656987 - 1657943 + | iron-compound ABC transporter, permease protein TERM 2030 1658297 - 1658283 - g 74 -4.2 -5.04987 | opp_overlap 1658283, overlap 1658272 AAGACTGGGAAAAAA TCCGAG AAA CTCTGA ATTATTTGGAACTGA fecE 1657940 - 1658692 + | iron-compound ABC transporter, ATP-binding protein TERM 2031 1659320 - 1659304 - g 74 -3.7 -5.01497 | ACTAGTACACAAAAA GCCAA GGAAGAA TTGGC CAAGCTAGACAAGAG TERM 2032 1659427 - 1659410 - g 82 -6.3 -4.93547 | gap 1, opp_overlap 1659418 TTAATGAAGGAAAAA TGGCAGCC TTT GG-TGCCA AATCTCGTTTCTCTT fatB 1658788 - 1659753 + | iron-compound ABC transporter, iron-compound-binding protein TERM 2033 1659908 - 1659945 + T 100 -15.8 -5.09245 | opp_overlap 1659908 TTTGACATTCTAAAA CGCATCCTATCAAGTT CACTCA AACCTGATAGGATGCG TTTTTATCATTTTGA TERM 2034 1659945 - 1659908 - T 100 -18.7 -4.16943 | opp_overlap 1659908 TTTGACATTCTAAAA CGCATCCTATCAAGTTC ACTC AAACCTGATAGGATGCG TTTTTATCATTTTGA spr1688 1660220 - 1659978 - | hypothetical protein TERM 2035 1660202 - 1660191 - G 73 -7.2 -4.10855 | opp_overlap 1660191 AAAACGTTGGTAAAA GCGC ACAA GCGC TATTAAAATTCGTTT rluB 1660942 - 1660220 - | ribosomal large subunit pseudouridine synthase B scpB 1661498 - 1660929 - | segregation and condensation protein B scpA 1662245 - 1661517 - | segregation and condensation protein A xerD 1662985 - 1662245 - | site-specific tyrosine recombinase XerD-like protein spr1693 1663437 - 1662976 - | CBS domain protein spr1694 1663955 - 1663434 - | hypothetical protein spr1695 1664902 - 1663931 - | fused deoxyribonucleotide triphosphate pyrophosphatase/unknown domain-containing protein murI 1665693 - 1664899 - | glutamate racemase TERM 2036 1665013 - 1664990 - G 71 -5.2 -4.56597 | GCTGTTGTGTAAAAA CGGTGATGGA GTGG TCCAGCATCG CGACCACGATTGATT TERM 2037 1665859 - 1665898 + r 80 -5.1 -5.29208 | opp_overlap 1665868, overlap 1665863 AAACCATAACCAACA TAGTGAGAAGTCTGGAA CTTTCA TCCCAGACTTTTCCTTA TTTATTTTTTCTTTT TERM 2038 1665863 - 1665894 + r 70 -8.1 -3.33489 | opp_overlap 1665868, overlap 1665859 CATAACCAACATAGT GAGAAGTCTGGAA CTTTCA TCCCAGACTTTTC CTTATTTATTTTTTC spr1697 1666202 - 1665900 - | hypothetical protein TERM 2039 1666215 - 1666191 - G 72 -10.1 -2.66316 | opp_overlap 1666191, overlap 1666195 CCTTTCATTATACCA CAAACTAGCCA CCC TGACCAGTTTG TTCTACACTTTCAAG dexS 1667915 - 1666290 - | dextran glucosidase TERM 2040 1666910 - 1666923 + g 73 -6.7 -4.2349 | CTAGCATGGTGGCTC CTTCC TTGC GGAAG TTTTGAATATCGACA TERM 2041 1667961 - 1667939 - R 89 -8.5 -4.36914 | gap 1, opp_overlap 1667916 1667939 1667937 CCTTTTCTGATAAAA GGGA-GGAAG CAGT CTTCCGTCCC TATTTGTGCTATTTC TERM 2042 1667939 - 1667961 + r 77 -8.5 -3.63897 | gap 1, opp_overlap 1667939, overlap 1667916 1667937 CCTTTTCTGATAAAA GGGA-GGAAG CAGT CTTCCGTCCC TATTTGTGCTATTTC treP 1670210 - 1668093 - | phosphotransferase system, trehalose-specific IIBC component TERM 2043 1670072 - 1670107 + g 77 -10 -3.30124 | overlap 1670076 1670080 CCATTTGATTCTCCT TATACTTGTCAAAGCA AGTT TGATTTGATAAGTATA TTGTAAACGATACCA treR 1670245 - 1670955 + | trehalose operon transcriptional repressor TERM 2044 1670985 - 1670953 - f 74 -6.4 -4.32607 | opp_overlap 1670958 1670960, overlap 1670958 GCAAAACGCAAGAAA TAAAAGACTGAGAC ACCAG ATCTCAGCCTTTTT CGGCTCTATAATATT TERM 2045 1670980 - 1670958 - f 84 -6.3 -5.10665 | opp_overlap 1670958 1670960, overlap 1670953 ACGCAAGAAATAAAA GACTGAGAC ACCAG ATCTCAGCC TTTTTCGGCTCTATA TERM 2046 1670985 - 1671038 + F 100 -9.2 -4.96848 | gap 1, overlap 1670987 AGATCTCAGCCTTTT TCGGCTCTATAATATTTGTAGTGGG TAAAT CCC-TTATAGATATTATGGAGCCTA TTTTTGTGTAGAAAA TERM 2047 1670987 - 1671036 + F 100 -11.8 -4.11141 | gap 1, overlap 1670985 ATCTCAGCCTTTTTC GGCTCTATAATATTTGTAGTGGG TAAAT CCC-TTATAGATATTATGGAGCC TATTTTTGTGTAGAA TERM 2048 1671810 - 1671824 + G 73 -8.6 -3.6502 | opp_overlap 1671810 AGGCTCAGGCTGAAA CAGTCT CCC AGACTG TTTCACTCCCGAATG TERM 2049 1671824 - 1671810 - g 72 -8.6 -3.57263 | opp_overlap 1671810 AGGCTCAGGCTGAAA CAGTCT CCC AGACTG TTTCACTCCCGAATG IS1167-truncation 1671111 - 1671893 + | degenerate transposase (orf1) TERM 2050 1672407 - 1672385 - g 93 -9.2 -5.27779 | opp_overlap 1672389 TTGAACATCAAAAAA GAAAGGACGA AAT TTGTCCTTTC TCGAGCTTAGCTGAC IS1167-truncation 1671890 - 1672417 + | degenerate transposase (orf2) amiF 1673463 - 1672492 - | oligopeptide ABC transporter, ATP-binding protein AmiF TERM 2051 1673298 - 1673320 + gT 74 -9.2 -3.14881 | opp_overlap 1673301, overlap 1673301 TACCGGACTCACCTA CAAGCGAGAA AGT TTCTCCCTTG TTGATAAAGAAGTTA TERM 2052 1673364 - 1673380 + gT 74 -9.5 -2.99251 | overlap 1673363 CGACAAACTTCTTAC TTCCTTC ACC GAAGGAA ATTTCTAAATCTTTG TERM 2053 1673442 - 1673454 + gT 79 -4.8 -5.02476 | TCCTAGTCAGCCAGA TGGG CAAAT CCCA TTTTTTCACGGATCT amiE 1674496 - 1673429 - | oligopeptide ABC transporter, ATP-binding protein AmiE amiD 1675431 - 1674505 - | oligopeptide ABC transporter, permease protein AmiD amiC 1676927 - 1675431 - | oligopeptide ABC transporter, permease protein AmiC TERM 2054 1676988 - 1676945 - R 84 -8.4 -4.57073 | gap 1, opp_overlap 1676953 1676956 1676978, overlap 1676947 1676953 TATTTCCTTTAAAAA TCCCAAAAGAACCTTCTCCTC ATG GAG-AGAAAGTTCTATTAGAA ATTATTTACTTCACA TERM 2055 1676980 - 1676953 - R 89 -8.6 -4.31329 | gap 1, opp_overlap 1676953 1676956 1676978, overlap 1676947 1676945 TTAAAAATCCCAAAA GAACCTTCTCCTC ATG GAG-AGAAAGTTC TATTAGAAATTATTT amiA 1678973 - 1676994 - | ABC transporter substrate-binding protein - oligopeptide transport TERM 2056 1677208 - 1677194 - G 73 -10 -2.9162 | CAATTCGTGAAAGCA CTGGTG CTG CACCAG AAGAAGCCATAGCAG TERM 2057 1679642 - 1679622 - R 100 -10.5 -5.626 | opp_overlap 1679622 CATCGTATAAAAAAA TCTCCTACC CAA GGTAGAAGA TTTCAAACTTATAAA TERM 2058 1679622 - 1679642 + r 73 -8.3 -3.62591 | opp_overlap 1679622 CATCGTATAAAAAAA TCTCCTACC CAA GGTAGAAGA TTTCAAACTTATAAA spr1708 1680853 - 1679660 - | hypothetical protein TERM 2059 1680680 - 1680658 - G 79 -4.8 -5.12068 | overlap 1680652 1680661 1680664 TATAGCTAAGAAAAA GAAGCAGCAT CGG ATGCTCCCCC ATTTTCTGAAGAATA TERM 2060 1680677 - 1680661 - G 71 -5.1 -4.64495 | overlap 1680658 1680652 1680664 AGCTAAGAAAAAGAA GCAGCAT CGG ATGCTCC CCCATTTTCTGAAGA TERM 2061 1680953 - 1680941 - R 80 -6.3 -4.68655 | CAATTTGAAAACAAA GGAAA CGT TTTCC AAAATAAAAACCCTA gtfA 1682433 - 1680991 - | sucrose phosphorylase TERM 2062 1682699 - 1682711 + r 73 -7.7 -3.72695 | CCGTAGGTATGGTTA CTGAC TTC GTCAG TTTCATCCACAACCT TERM 2063 1682743 - 1682725 - R 78 -10.4 -2.61383 | overlap 1682724 AGTTTCATCCACAAC CTCAAAAC AGT GTTTTGAG CAACCTGCGGCTAGC msmG 1683624 - 1682791 - | sugar ABC transporter, permease protein msmF 1684528 - 1683638 - | sugar ABC transporter, permease protein msmE 1685777 - 1684518 - | sugar ABC transporter, sugar-binding protein TERM 2064 1685813 - 1685866 + r 95 -15 -2.93109 | gap 1, opp_overlap 1685817 TTTATACACCCTTAT TGAACTGCACCCCAAAAGTTAGA CAGAATAAA TCTAACTTTTGGGGT-CAGTACA TATCATAGTTTTCTA TERM 2065 1685862 - 1685817 - R 100 -15.1 -3.06501 | gap 1, opp_overlap 1685813 TACACCCTTATTGAA CTGCACCCCAAAAGTTAGAC AGAATAA ATCTAACTTTTGGGGT-CAG TACATATCATAGTTT aga 1688031 - 1685869 - | Alpha-galactosidase (melibiase) msmR 1688139 - 1688999 + | MSM (multiple sugar metabolism) operon regulatory protein TERM 2066 1689678 - 1689653 - g 90 -4.8 -5.54338 | gap 1, opp_overlap 1689650 1689653, overlap 1689671 GAATTAAAAGAAAAA GCTGCCAGCTT ATTTA AAGCTA-CAGC TCCTATAACAAGGAA birA 1688996 - 1689931 + | biotin--protein ligase TERM 2067 1690013 - 1690066 + F 88 -7 -4.96848 | gap 1, overlap 1690015 GGATCTGAAGTTTTA TTGTCTCTATAATATTTGTAGTGGG TAAAT CCC-CTATAGATATTATGGAGCCTA TTTTTGTGTAGAAAA TERM 2068 1690015 - 1690064 + F 93 -9.6 -4.11141 | gap 1, overlap 1690013 ATCTGAAGTTTTATT GTCTCTATAATATTTGTAGTGGG TAAAT CCC-CTATAGATATTATGGAGCC TATTTTTGTGTAGAA TERM 2069 1690566 - 1690544 - g 100 -13.6 -5.27779 | opp_overlap 1690548 TTGAACATCAAAAAA GAAAGGACAA AAT TTGTCCTTTC TCGAGCTTAGCTTTT TERM 2070 1690548 - 1690562 + G 77 -8.6 -3.89614 | opp_overlap 1690544 ACATCAAAAAAGAAA GGACAA AAT TTGTCC TTTCTCGAGCTTAGC IS1167-truncation 1690139 - 1690576 + | degenerate transposase (fusion of orf1 and orf2) TERM 2071 1690639 - 1690617 - T 100 -9.2 -5.18561 | opp_overlap 1690621 CAAAGAGCCAAAAAA GAAAGGACGA AAT TTGTCCTTTC TCGAGCTTAGCTTTT TERM 2072 1690775 - 1690759 - T 100 -9.5 -5.93252 | opp_overlap 1690761 TCTAAAAATAAAAAA GAGAGTT ACA AACTCTC ATTAAAACGGAGAAT TERM 2073 1691798 - 1691818 + T 79 -9.7 -3.31263 | overlap 1691800 ATTCGAACCCGCGAC CCCCACCTT GGC AAGGTGGTG TTCTACCACTGAACT TERM 2074 1691800 - 1691816 + T 86 -10.9 -3.22475 | overlap 1691798 TCGAACCCGCGACCC CCACCTT GGC AAGGTGG TGTTCTACCACTGAA TERM 2075 1695097 - 1695116 + T 91 -12.2 -3.62096 | opp_overlap 1695096 1695095 TGCAGTCCTACAACC CCGAAGAG TAAA CTCTTCGG TTTGCCCTCCTGCCG TERM 2076 1697199 - 1697213 + T 95 -8.6 -4.89605 | GAGTTCTTACTCATT TCTGTC ACT GACAGA TTTATTGTTTTTTTC spr1717 1698919 - 1697564 - | hypothetical protein recX 1698957 - 1699733 + | recombination regulator RecX TERM 2077 1700182 - 1700170 - g 71 -4.8 -4.61633 | ACAGATGGGGAAAAA CGTC TCTTG GACG TTGAAGAGTACGAGC spr1719 1699822 - 1700355 + | hypothetical protein TERM 2078 1700366 - 1700387 + T 100 -10.2 -5.20216 | opp_overlap 1700366 GGTAAAGTTGTCAAA GGTCAGGA ACAAAA TCCTGACC TTTTTTGGTAGTATA TERM 2079 1700387 - 1700366 - T 86 -10.2 -3.5936 | opp_overlap 1700366 GGTAAAGTTGTCAAA GGTCAGGA ACAAAA TCCTGACC TTTTTTGGTAGTATA TERM 2080 1700423 - 1700410 - T 74 -5.3 -4.80453 | GTAGTATAAAATAAA TTGTG TAAA CACAA AAAGGAATAAATCTA spr1720 1700915 - 1700709 - | hypothetical protein TERM 2081 1700950 - 1701003 + H 100 -14.1 -4.52589 | overlap 1700952 ATTAGATGTGAATTT TCGGCTCTATAATATTTGTAGTGGG TAAC CCCCCTATGGATATTATGGAGCCTA TTTTGTGTAGAAAAA TERM 2082 1700952 - 1701001 + H 100 -16.7 -3.87627 | overlap 1700950 TAGATGTGAATTTTC GGCTCTATAATATTTGTAGTGGG TAAC CCCCCTATGGATATTATGGAGCC TATTTTGTGTAGAAA TERM 2083 1702294 - 1702272 - g 93 -9.2 -5.27779 | opp_overlap 1702276 TTGAACATCAAAAAA GAAAGGACGA AAT TTGTCCTTTC TCGAGCCTAGCTGAC IS1167-truncation 1701075 - 1702304 + | degenerate transposase (fusion of orf1 and orf2) groEL 1704025 - 1702403 - | chaperonin GroEL TERM 2084 1703501 - 1703518 + g 70 -7.7 -3.61889 | overlap 1703501 1703503 ACCACGTGACTCTTC GATGGTG ATGA CACCGTC TTTGCCAACTTTTTC groES 1704325 - 1704041 - | co-chaperonin GroES TERM 2085 1704476 - 1704446 - R 85 -12.1 -3.02511 | opp_overlap 1704445 1704446 1704452, overlap 1704452 CTGACTTTCTCAAGA TAAAAAGCCTGAG ACCAA CTCAGACTTTTTA ATTCTTAAAATGGCA TERM 2086 1704446 - 1704476 + r 76 -9.9 -2.78813 | opp_overlap 1704446 1704452, overlap 1704445 1704452 CTGACTTTCTCAAGA TAAAAAGCCTGAG ACCAA CTCAGACTTTTTA ATTCTTAAAATGGCA TERM 2087 1704452 - 1704470 + r 73 -4.5 -4.99435 | opp_overlap 1704446 1704452, overlap 1704446 1704445 TTCTCAAGATAAAAA GCCTGAG ACCAA CTCAGAC TTTTTAATTCTTAAA TERM 2088 1704470 - 1704452 - R 84 -6.7 -5.0916 | opp_overlap 1704452 1704446 1704445, overlap 1704446 TTCTCAAGATAAAAA GCCTGAG ACCAA CTCAGAC TTTTTAATTCTTAAA ssbB 1704876 - 1704481 - | single-strand DNA-binding protein TERM 2089 1704937 - 1704920 - R 85 -4.2 -5.73563 | opp_overlap 1704920 AGGAAATCAAAAAAA GTTACA GAAATT TGTAAC TTTTCGAGGAAATTT TERM 2090 1704939 - 1704949 + r 70 -4 -4.86216 | CAGAAATTTGTAACT TTTC GAG GAAA TTTCTTATTTTTTAT ydfG 1705715 - 1704954 - | oxidoreductase spr1726 1706374 - 1705748 - | hypothetical protein spr1727 1706707 - 1706390 - | hypothetical protein spr1728 1707003 - 1706704 - | hypothetical protein TERM 2091 1707083 - 1707061 - R 88 -7 -4.97312 | opp_overlap 1707061 1707067, overlap 1707062 AAAAGCAAGTAAAAA GCCTCTTCCT TTA AGGAAAAGGA CTTCTTATACTCAAT TERM 2092 1707082 - 1707062 - R 86 -10.5 -3.55947 | opp_overlap 1707061 1707067, overlap 1707061 AAAGCAAGTAAAAAG CCTCTTCCT TTA AGGAAAAGG ACTTCTTATACTCAA TERM 2093 1707137 - 1707157 + r 72 -8.3 -3.35996 | opp_overlap 1707123, overlap 1707130 1707138 AGCTAGCCGCAGGCT GCTCAAAGC ACT GCTTTGAGG TTGTAGATAGAACTG TERM 2094 1707138 - 1707156 + r 84 -11.8 -2.61383 | overlap 1707130 1707137 GCTAGCCGCAGGCTG CTCAAAGC ACT GCTTTGAG GTTGTAGATAGAACT TERM 2095 1707185 - 1707167 - R 76 -9.6 -2.87931 | opp_overlap 1707182 1707183, overlap 1707170 1707182 TTGAGGTTGTAGATA GAACTGAC GAA GTCAGCTC AAAACACTGTTTTGA TERM 2096 1707182 - 1707170 - R 71 -7.7 -3.58905 | overlap 1707167 AGGTTGTAGATAGAA CTGAC GAA GTCAG CTCAAAACACTGTTT TERM 2097 1707183 - 1707201 + r 78 -10.4 -2.61383 | opp_overlap 1707167 1707182, overlap 1707182 AACTGACGAAGTCAG CTCAAAAC ACT GTTTTGAG GTTGTGGATGAAGCT spr1729 1707555 - 1707340 - | hypothetical protein spr1730 1708366 - 1707692 - | hypothetical protein spr1731 1708821 - 1708372 - | hypothetical protein TERM 2098 1708585 - 1708551 - G 70 -9.2 -3.24709 | overlap 1708556 TAAAATAGCGAGGAA GGATAGCCTCCAACTC ATA GAGCTTGAGGCGAACC TCATAAGCTTCCTTC TERM 2099 1708580 - 1708556 - G 78 -10.7 -2.94199 | overlap 1708551 TAGCGAGGAAGGATA GCCTCCAACTC ATA GAGCTTGAGGC GAACCTCATAAGCTT spr1732 1709435 - 1708932 - | PAP2 family protein TERM 2100 1709246 - 1709236 - G 76 -6.8 -4.43859 | GACAAGGCCACAAAA CCTG ATG CAGG AATAAGCACATAAAC spr1733 1709794 - 1709432 - | hypothetical protein TERM 2101 1709852 - 1709835 - R 76 -2.7 -5.42164 | opp_overlap 1709830 1709835 TATAAATAAGAAAAA GAAGG TCGTCAAG CCTTC TTTTGATTTATTCTT ABC-NBD-truncation 1710891 - 1709860 - | ABC transporter ATP-binding protein ABC-NBD-truncation 1711068 - 1710898 - | ABC transporter ATP-binding protein - unknown substrate, truncation ABC-NBD-truncation 1711719 - 1711072 - | ABC transporter ATP-binding protein - unknown substrate, truncation spr1737 1712205 - 1711861 - | hypothetical protein TERM 2102 1712046 - 1712062 + g 85 -7.3 -4.8543 | opp_overlap 1712050 1712052, overlap 1712047 GCTCGATATCTTTAA TCAAGAC CAA GTCTTGG TTTTTCTCGCGATTA TERM 2103 1712047 - 1712061 + g 72 -8.6 -3.50535 | opp_overlap 1712050 1712052, overlap 1712046 CTCGATATCTTTAAT CAAGAC CAA GTCTTG GTTTTTCTCGCGATT TERM 2104 1712309 - 1712285 - R 100 -9.4 -5.52384 | opp_overlap 1712285 TCTTGATTAAAAAAA TCCCAAGTGA TTTTC TCACTTAGGA TCATGTTCTATAGGT spr1738 1713045 - 1712329 - | hypothetical protein TERM 2105 1713782 - 1713744 - R 78 -7.5 -4.20834 | overlap 1713739 TCTAAAACAAGTAAA GGATAATCAATCCCCTG TATAT CAAGGAATTGGCTACCC TTTTTACTTTTTTAC ply 1715341 - 1713926 - | pneumolysin spr1740 1715762 - 1715352 - | hypothetical protein spr1741 1716363 - 1715755 - | hypothetical protein TERM 2106 1716045 - 1716030 - G 93 -9 -5.2197 | opp_overlap 1716043 GATAAAAATCAAAAA CAGGAG CTAA CTCCTG CCAATCTGATTGGCT spr1742 1716851 - 1716369 - | hypothetical protein spr1743 1716585 - 1716376 - | hypothetical protein TERM 2107 1717085 - 1717058 - g 75 -5.6 -4.72986 | opp_overlap 1717045 TAGCTGTATTAAAAA CAGCTTATCAAA AAAG TCGGACAAGCTG GTAAAATCTTGGCTG IS1381-truncation 1716958 - 1717089 + | degenerate transposase (orf1) TERM 2108 1717299 - 1717257 - g 93 -10.8 -4.98531 | overlap 1717291 TTGCCAAAGTAAAAA CGTTTAAAATGTTTTCAACA ACC TGTCGAAATCATCGTAAACG CTTCGGATTACGAAT IS1381-truncation 1717094 - 1717357 + | degenerate transposase (orf2) TERM 2109 1717932 - 1717911 - T 74 -3 -5.23316 | overlap 1717912 TACTATACTAAAAAA CCACCTGA AACAAA TCAAGTGA CTAGAGGATAAAAAC TERM 2110 1718020 - 1717982 - T 93 -7.7 -5.46698 | gap 1 TTGAAAAGCAAAAAA CGCATAATATC-AGGTCT TGAA AAACCTTGATACTATACG TTTGATTGTGGGAAG TERM 2111 1718041 - 1718064 + T 87 -6.8 -5.42265 | overlap 1718032 TTGTGGGAAGATTGA CTTCATTTTC TCCT GAAATTGAAG TTTTTTCTAGTTTCC spr1746 1718382 - 1718122 - | hypothetical protein TERM 2112 1718463 - 1718481 + r 78 -10.4 -2.61264 | overlap 1718462 GCTAGTTGCAGGCTG CTCAAAAC ACT GTTTTGAG GTTGTAGATGGAAGC spr1747 1718995 - 1718441 - | hypothetical protein spr1748 1719179 - 1718982 - | hypothetical protein spr1749 1719977 - 1719183 - | hypothetical protein spr1750 1720810 - 1720385 - | hypothetical protein spr1751 1721298 - 1720939 - | hypothetical protein spr1752 1721586 - 1721344 - | hypothetical protein spr1753 1721710 - 1721537 - | hypothetical protein TERM 2113 1721790 - 1721750 - R 84 -11.6 -3.02121 | opp_overlap 1721762 1721762, overlap 1721745 1721762 AAAAAGAATAGCACA CTTTTGTCATAATTTTTT AAATA AAAAAATTATGACAAAAC AAGGAAGCAATTTAT TERM 2114 1722040 - 1722002 - R 100 -9.9 -4.77567 | gap 1, opp_overlap 1722002 ATCTCCACAAGAAAA CGCATACTATTAAG-CTT TTTC AAGACCTAATAATATGCG CTGTTCTGATTTGAA lytA 1723025 - 1722069 - | N-acetylmuramoyl-L-alanine amidase spr1755 1723153 - 1723091 - | hypothetical protein dinF 1724771 - 1723401 - | MATE efflux family protein DinF TERM 2115 1724147 - 1724136 - G 70 -3.6 -4.91285 | overlap 1724137 ACGAATATAATAAAA GCAG AGAA CCGC TGATAAACCTTGCGA TERM 2116 1725068 - 1725049 - R 73 -4.2 -4.92239 | opp_overlap 1725049, overlap 1725052 TCAAAAATCGAAAAA GTAGCGGA TTTC TCCACTGC TTTAACAGCTTATTC recA 1726244 - 1725078 - | recombinase A cinA 1727555 - 1726299 - | competence damage-inducible protein A TERM 2117 1727595 - 1727614 + r 71 -6.4 -4.14454 | opp_overlap 1727595, overlap 1727592 ATTTTTTTGAAAAAA TCGCAGGA ATTT TCCTACGA TTGATTTTTTTATTT TERM 2118 1727614 - 1727595 - R 95 -8.6 -5.00884 | opp_overlap 1727595 1727592 ATTTTTTTGAAAAAA TCGCAGGA ATTT TCCTACGA TTGATTTTTTTATTT lytR 1728656 - 1727640 - | transcriptional regulator TERM 2119 1727886 - 1727911 + g 70 -9.1 -3.24924 | overlap 1727884 GTTAGGGATACTTTT TGCAGACAAAT CAAT ATTGGTCTGCA TATTGTCACTCAAAG spr1760 1729182 - 1728664 - | hypothetical protein spr1761 1729615 - 1729172 - | hypothetical protein spr1762 1730321 - 1729701 - | hypothetical protein TERM 2120 1730660 - 1730626 - R 83 -11.7 -2.90061 | opp_overlap 1730623 1730622 1730620, overlap 1730629 AGAGTCACATAATTA TAAGGCTGATAGT ATTAATCTA ACTATCAGCCTTA CAGGTTATTTAACGT TERM 2121 1730657 - 1730629 - R 77 -9 -3.59023 | opp_overlap 1730623 1730622 1730620, overlap 1730626 GTCACATAATTATAA GGCTGATAGT ATTAATCTA ACTATCAGCC TTACAGGTTATTTAA plcR 1731567 - 1730704 - | transcriptional activator TERM 2122 1731510 - 1731526 + g 76 -7.3 -4.17301 | overlap 1731517 CTTCTGCAAGAGTTT GTTGGGA GAG TCTCAAC TCTTTTCTTTTCAAT TERM 2123 1731517 - 1731528 + g 76 -4.4 -5.11836 | overlap 1731510 AAGAGTTTGTTGGGA GAGT CTCA ACTC TTTTCTTTTCAATCT TERM 2124 1731753 - 1731742 - H 71 -3 -5.10004 | AAAAACAAGGAAAAA GAAA GGGG TTTC ATTGCATGAGAAAAA spr1764 1731759 - 1731929 + | hypothetical protein spr1765 1732032 - 1732256 + | hypothetical protein spr1766 1732263 - 1732451 + | hypothetical protein TERM 2125 1732465 - 1732449 - f 78 -2.4 -5.68489 | opp_overlap 1732461, overlap 1732461 GACAACAAGAAAAAA TAAAAT ATTCA ATTTTA AAAATAAAAGTTGCT TERM 2126 1732490 - 1732520 + F 100 -7.6 -6.34424 | GTTGCTCTTTATTTT CCTCTCTCGTAACT AAT AATTTTGAGAGAGG TTTTTTTTTTAAACA TERM 2127 1733591 - 1733601 + G 70 -5.4 -4.34932 | ATTATAATTTTGGTG TGCT TTT AGCA TTTATATATTTATTT TERM 2128 1734306 - 1734320 + G 79 -5.8 -4.90778 | CAATGAAATCTACGA TGATTT TGG AAATCA TTTTATTTCCCTACA cylM 1732567 - 1735557 + | bacteriocin formation protein, putative TERM 2129 1735773 - 1735755 - f 76 -7.6 -4.04206 | CTACTGTTATAGAAA TGATTTTA AAC TAAAATCA AAATTACTCCAAAAA TERM 2130 1736217 - 1736206 - g 78 -3 -5.36441 | TGTGGACACAAAAAA CTTT ATTG AAAG GATTGGGGGGTGGAG spr1768 1735907 - 1736611 + | hypothetical protein TERM 2131 1737008 - 1737018 + G 71 -4 -4.98255 | overlap 1737002 AGAATTTTTTATTTT GAAT ATA ATTC TTTTTCTAGTTACGG spr1769 1736592 - 1737521 + | hypothetical protein TERM 2132 1737764 - 1737777 + G 70 -3.1 -5.00467 | CCACTCATTTGCTTC TGGGA GAGT TCTCA TTTTATTATTCTTGA clyB 1737518 - 1739626 + | toxin secretion ABC transporter, ATP-binding/permease protein TERM 2133 1741050 - 1741040 - g 88 -4 -5.75342 | TGTTTGTAAAAAAAA TTCT GGA AGAA ACATTACCAGTAAAA nisP 1739650 - 1741389 + | subtilisin-like serine protease spr1772 1741440 - 1742207 + | hypothetical protein ABC-NBD 1742209 - 1742841 + | ABC transporter ATP-binding protein - unknown substrate spr1774 1742999 - 1743160 + | hypothetical protein TERM 2134 1743601 - 1743617 + T 100 -13.7 -6.02914 | ATAACCTTCGACGCA CACCCGC ATA GCGGGTG TTTTTTTTGTCTCGC TERM 2135 1743713 - 1743676 - T 76 -3.6 -5.28481 | opp_overlap 1743708 CACTTAATCAAAAAA CGCACCATATCAAA AACTAAAAAG TTTGATATCATGCG TCATGTCTTAAACTA ndk 1744200 - 1743787 - | nucleoside diphosphate kinase TERM 2136 1744319 - 1744263 - R 100 -10.4 -4.09459 | gap 1, opp_overlap 1744263 1744273, overlap 1744273 1744280 GGAAAAATGGAGAAA GTTTTCAGAAGAGAGAATGAGAGAACC CTCG GGTTCTCTCATTCTCTCTTATTCTA-C TGTTTCTTCCACAGT TERM 2137 1744273 - 1744310 + r 100 -24.5 -3.90897 | opp_overlap 1744273 1744263 1744280, overlap 1744263 AGAAAGTTTTCAGAA GAGAGAATGAGAGAACC CTCG GGTTCTCTCATTCTCTC TTATTCTACTGTTTC TERM 2138 1744310 - 1744273 - R 100 -24.5 -3.32562 | opp_overlap 1744263 1744273, overlap 1744263 1744280 AGAAAGTTTTCAGAA GAGAGAATGAGAGAACC CTCG GGTTCTCTCATTCTCTC TTATTCTACTGTTTC TERM 2139 1744303 - 1744280 - R 100 -14 -3.72788 | opp_overlap 1744273 1744263, overlap 1744273 1744263 TTTCAGAAGAGAGAA TGAGAGAACC CTCG GGTTCTCTCA TTCTCTCTTATTCTA rpoC 1747988 - 1744311 - | DNA-directed RNA polymerase subunit beta' rpoB 1751671 - 1748021 - | DNA-directed RNA polymerase subunit beta TERM 2140 1752157 - 1752172 + r 71 -3.2 -5.093 | opp_overlap 1752157 TCAAATGAACAGAAA GCCC AATTTGAA GGGC TTTTCTTATTTTCCC TERM 2141 1752308 - 1752283 - R 77 -4.8 -5.1848 | gap 1, overlap 1752284 1752285 AATCAATTGAAAAAA GCTTC-GTCAC GCCTG GTGACAAAAGC CTCTAGTTTATTCTG hlyX 1753647 - 1752316 - | hemolysin TERM 2142 1753861 - 1753835 - R 71 -5.2 -4.50218 | overlap 1753832 AACTAGTAAAAAGAA CTCCTACATC CATAAGT GACATAGGAG TTTAGGCTTATCTTT endA 1754700 - 1753876 - | DNA-entry nuclease TERM 2143 1754739 - 1754724 - R 100 -10.4 -4.84359 | opp_overlap 1754721 1754724 TTATCTTTAGAAAAA GGCTGG TTCT CCAGCC TAATTTCCTGTAAAT TERM 2144 1754724 - 1754739 + r 80 -10.4 -3.00138 | opp_overlap 1754724, overlap 1754721 TTATCTTTAGAAAAA GGCTGG TTCT CCAGCC TAATTTCCTGTAAAT epuA 1754945 - 1754739 - | hypothetical protein murA 1756203 - 1754920 - | UDP-N-acetylglucosamine 1-carboxyvinyltransferase spr1782 1757552 - 1756515 - | hypothetical protein TERM 2145 1756700 - 1756690 - G 71 -6.8 -4.08958 | GGAGCAAAGAAAATA GCAG CAC CTGC CCTAGCCGAAGCTAC coaD 1758024 - 1757536 - | phosphopantetheine adenylyltransferase spr1784 1758553 - 1758014 - | type II DNA modification (methyltransferase TERM 2146 1758618 - 1758591 - RH 100 -11.4 -4.62163 | opp_overlap 1758596 1758597, overlap 1758596 AGACAAAAAGAGAAA GAAAACCGAACC TTGC GGTTCGATTCTC TACAAAATATTTTCG TERM 2147 1758613 - 1758596 - RH 88 -7.7 -5.15682 | opp_overlap 1758596 1758597, overlap 1758591 AAAAGAGAAAGAAAA CCGAACC TTGC GGTTCGA TTCTCTACAAAATAT asnA 1759616 - 1758618 - | asparagine synthetase AsnA TERM 2148 1759708 - 1759687 - gR 100 -5.2 -5.91981 | opp_overlap 1759687 AAAATTTAAAAAAAA TCAGTGTC ACTCAA AACACTGA TTTCATAGACCTTTT spr1786 1759587 - 1759748 + | hypothetical protein spr1787 1760429 - 1759722 - | hypothetical protein yjfA 1761219 - 1760461 - | rRNA/tRNA methylase acyP 1761235 - 1761513 + | acylphosphate phosphohydrolase TERM 2149 1761978 - 1761954 - g 79 -9.4 -3.68222 | CTCGAAGCCCAACAA GCTCTCTTTG CTGCT CAAAAAGAGC ACGGTATCAGCATGT TERM 2150 1762512 - 1762487 - g 87 -4.8 -5.41787 | gap 1 GAAAAAACACAAAAA TCGCAACGCTG GAAAA CAACGTT-CGA GATAAGAAGAAAAAG spr1790 1761591 - 1762517 + | OxaA-like protein precursor TERM 2151 1762548 - 1762527 - T 79 -4.4 -5.35721 | opp_overlap 1762527, overlap 1762529 AGATAAGAAGAAAAA GGCTTAGC TGATTT GCTAAGTC TTTTTGCAAGTCAAA TERM 2152 1762527 - 1762548 + T 76 -6.6 -4.59773 | opp_overlap 1762527 1762529 AGATAAGAAGAAAAA GGCTTAGC TGATTT GCTAAGTC TTTTTGCAAGTCAAA TERM 2153 1762562 - 1762587 + T 74 -6.1 -4.56358 | opp_overlap 1762565, overlap 1762565 TCTTTTTGCAAGTCA AAAGCCCGATG TTTC CATCAGGCTTC TTTTCTATCCATGTA TERM 2154 1762565 - 1762584 + T 81 -7.8 -4.38744 | opp_overlap 1762565, overlap 1762562 TTTTGCAAGTCAAAA GCCCGATG TTTC CATCAGGC TTCTTTTCTATCCAT TERM 2155 1762584 - 1762565 - T 100 -10 -4.27316 | opp_overlap 1762565 1762562 TTTTGCAAGTCAAAA GCCCGATG TTTC CATCAGGC TTCTTTTCTATCCAT pflC 1763386 - 1762592 - | pyruvate-formate lyase activating enzyme lysA 1764762 - 1763512 - | diaminopimelate decarboxylase TERM 2156 1764814 - 1764793 - R 74 -6.5 -4.41348 | opp_overlap 1764793 CTGTTTGCAAAGAAA GGCTGGGAC AATC GTTCCAACC TTTAGTTCTATCTCT purR 1765656 - 1764829 - | purine operon repressor TERM 2157 1765908 - 1765881 - R 78 -2.1 -5.72616 | overlap 1765882 ATTTACATAAAAAAA CGAACATTCTT ATCCTA AAAAATGCTCA TTTTTCTTAAATTAT cbf1 1766927 - 1765923 - | cmp-binding-factor 1 spr1795 1768152 - 1766854 - | hypothetical protein spr1796 1768795 - 1768112 - | hypothetical protein rpe 1769393 - 1768737 - | ribulose-phosphate 3-epimerase spr1798 1770282 - 1769404 - | ribosome-associated GTPase ksgA 1771156 - 1770284 - | dimethyladenosine transferase TERM 2158 1771262 - 1771237 - R 100 -9.9 -5.2422 | opp_overlap 1771237 AATCATACCAAAAAA CTATCTTTCCT CATG AAGAAAGATAG TCTTGGAAATCTTTA spr1800 1771601 - 1771287 - | hypothetical protein ABC-NBD 1772229 - 1771588 - | ABC transporter ATP-binding protein - unknown substrate spr1802 1774273 - 1772231 - | hypothetical protein TERM 2159 1774458 - 1774484 + r 100 -12.5 -4.25104 | opp_overlap 1774458 TTATATCTAAAAAAA CAGTTCTAAAG ACGAA CTTTAGAACTG TTTTGATACGAGGAC TERM 2160 1774484 - 1774458 - R 100 -12.5 -5.50499 | opp_overlap 1774458 TTATATCTAAAAAAA CAGTTCTAAAG ACGAA CTTTAGAACTG TTTTGATACGAGGAC plcR 1775429 - 1774530 - | transcriptional regulator PlcR, putative spr1804 1776061 - 1775501 - | primase-related protein TERM 2161 1775596 - 1775614 + g 70 -9.6 -2.59565 | opp_overlap 1775591, overlap 1775595 1775594 CGTTAGAATAGCCGA TTCGGAGA GTC TCTCCGAG ATATTCTCTACGCTT spr1805 1776834 - 1776061 - | hypothetical protein TERM 2162 1776877 - 1776912 + r 84 -11.2 -3.08679 | gap 1, opp_overlap 1776877, overlap 1776879 1776879 1776909 1776910 TATTATACCAAAAAA GAGGAGGGG-CACCTAA TTT TTCGGTTTCCCCTCCTC TCTTCAATAGAGAGC TERM 2163 1776912 - 1776877 - R 100 -11.2 -5.23316 | gap 1, opp_overlap 1776877 1776879 1776879 1776909 1776910 TATTATACCAAAAAA GAGGAGGGG-CACCTAA TTT TTCGGTTTCCCCTCCTC TCTTCAATAGAGAGC spr1806 1777805 - 1777140 - | cell wall surface anchor family protein TERM 2164 1778045 - 1778022 - R 82 -3.2 -5.69262 | opp_overlap 1778022 TTACAAAAATAAAAA TCAGTAGA CTCGAGTT CCTACTGA TTTTTGATAGAATTC rpmH 1778202 - 1778068 - | 50S ribosomal protein L34 aspC 1779561 - 1778347 - | aminotransferase AlaT TERM 2165 1779672 - 1779661 - R 79 -4.4 -5.24796 | CGTATAGAAGAAAAA CCTT GCTA AAGG CGAGGTTAAGAACGT spr1809 1780025 - 1779717 - | hypothetical protein TERM 2166 1779894 - 1779879 - G 76 -3.3 -5.1971 | ATGAAAAACTAAAAA TCCAA TAAAAC TTGGA TAAAGAAGCGGTACC spr1810 1780109 - 1780624 + | hypothetical protein TERM 2167 1780656 - 1780632 - T 78 -7.9 -4.1021 | opp_overlap 1780637, overlap 1780637 CCTTATAATCACAAA GAAAAGGAGCC CCT AGCTCCTTTTT GTTTACGATTTATTT TERM 2168 1780637 - 1780651 + T 89 -7.1 -5.29846 | opp_overlap 1780632 1780637 TAATCACAAAGAAAA GGAGC CCCTA GCTCC TTTTTGTTTACGATT TERM 2169 1780651 - 1780637 - T 88 -7.8 -5.04733 | opp_overlap 1780637, overlap 1780632 TAATCACAAAGAAAA GGAGCC CCT AGCTCC TTTTTGTTTACGATT spr1811 1782077 - 1780659 - | Cof family protein TERM 2170 1781918 - 1781908 - G 84 -2.4 -5.7946 | TCCTTAACAAAAAAA GGTC CTC GCCC TGTCGCTACGCCAAC TERM 2171 1782242 - 1782256 + G 81 -5.7 -5.09426 | opp_overlap 1782237 1782242, overlap 1782237 CTTGAAGGAATCCAA GTCCA CGCCT TGGAC TTTTTTAACCTTCCA ansB 1782113 - 1783075 + | L-asparaginase, putative TERM 2172 1783133 - 1783145 + T 73 -7.7 -3.83205 | CCGTATGTATGGTTA CTGAC TTC GTCAG TTTCATCTACAACCT TERM 2173 1783178 - 1783190 + T 73 -7.7 -3.72695 | AAAACATGTTTTGAG CTGAC TTC GTCAG TTTCATCCACAACCT TERM 2174 1783325 - 1783291 - T 72 -9.5 -2.73875 | opp_overlap 1783296, overlap 1783296 TCTTGTTTAAGAGCA CAAAATCAGGAAATC TTCTC GATTCCCTGATTTTT TCTATTTACGTTTTC TERM 2175 1783296 - 1783320 + T 93 -7.2 -5.56264 | opp_overlap 1783296 1783291 TTTAAGAGCACAAAA TCAGGAAATC TTCTC GATTCCCTGA TTTTTTCTATTTACG TERM 2176 1783320 - 1783296 - T 93 -9.4 -4.55023 | opp_overlap 1783296, overlap 1783291 TTTAAGAGCACAAAA TCAGGAAATC TTCTC GATTCCCTGA TTTTTTCTATTTACG ccpA 1784367 - 1783327 - | catabolite control protein A TERM 2177 1784137 - 1784149 + g 71 -4.1 -4.8622 | overlap 1784136 TGGAATCACGACACC GACAG TGG TTGTC TTTTTACTTGCAAGA TERM 2178 1784479 - 1784490 + r 76 -4.4 -5.055 | opp_overlap 1784479 ATCACTAATTGTAAA CACT TTCA AGTG TTTTTTGAAGATTGA TERM 2179 1784525 - 1784515 - R 73 -4 -5.09895 | GATTGATTGAAAAAA TTTC ATA GAAA ACCTAGGTTTAGCTC TERM 2180 1784587 - 1784569 - R 76 -3.8 -5.35815 | TAGACTAAACAAAAA GGAGGA AACTAAG CCCTCC TAAAGTTATAGTAAA rr11 1785361 - 1784762 - | DNA-binding response regulator hk11 1786460 - 1785363 - | sensor histidine kinase, putative spr1816 1787227 - 1786460 - | hypothetical protein TERM 2181 1787121 - 1787100 - GR 73 -2.3 -5.27709 | gap 1, overlap 1787102 1787107 1787108 CCAGAAAAAAATAAA TAGAAA-GCC GTC GGCATCCCTA CCGACAATAGATAAT ABC-NBD 1788083 - 1787199 - | ABC transporter ATP-binding protein spr1818 1788467 - 1788261 - | hypothetical protein TERM 2182 1788544 - 1788529 - R 74 -6.2 -4.46212 | TCTGTCACTAGAAAA TATGAC AAAT GTCATA AAAATTCTGTTCAAA TERM 2183 1788873 - 1788857 - R 71 -5.3 -4.56597 | TTGCTTTCTTAAAAA TTTATAA GAG TTATAAA ATCTGTTAAATTTCA TERM 2184 1788998 - 1788976 - R 100 -9.2 -5.46698 | opp_overlap 1788976 CTGAAAATCAAAAAA GAGAGAACCA AAC TGATTCCCTC TTAATGTATATAATA TERM 2185 1789348 - 1789368 + r 79 -9.7 -3.31263 | overlap 1789350 ATTCGAACCCGCGAC CCCCACCTT GGC AAGGTGGTG TTCTACCACTGAACT TERM 2186 1789350 - 1789366 + r 86 -10.9 -3.22475 | overlap 1789348 TCGAACCCGCGACCC CCACCTT GGC AAGGTGG TGTTCTACCACTGAA TERM 2187 1792647 - 1792666 + r 91 -12.2 -3.62096 | opp_overlap 1792646 1792645 TGCAGTCCTACAACC CCGAAGAG TAAA CTCTTCGG TTTGCCCTCCTGCCG TERM 2188 1794749 - 1794763 + r 95 -8.6 -4.89605 | GAGTTCTTACTCATT TCTGTC ACT GACAGA TTTATTGTTTTTTTC TERM 2189 1794934 - 1794945 + r 77 -3 -5.52986 | TTTGAAGATTTTTAA GTTT TTTT AAAC TTTTTTTCATCAAGT comX2 1795625 - 1795146 - | competence-specific global transcription modulator TERM 2190 1795740 - 1795723 - R 100 -11.3 -5.28826 | opp_overlap 1795736 AAACTGCACAAAAAA GAGAGGC TCCA GCCTCTC TCAGGGTTATAATTC nusG 1796298 - 1795747 - | transcription antitermination protein NusG TERM 2191 1796260 - 1796246 - G 71 -7.2 -3.91357 | TCATAACCAGAATAA GTTTGT AAA ACAAAC CATCCTTTATCAAAA secE 1796514 - 1796338 - | preprotein translocase subunit SecE rpmG 1796676 - 1796524 - | 50S ribosomal protein L33 TERM 2192 1796647 - 1796661 + g 85 -4.2 -5.52986 | overlap 1796648 CGAACCACAAACCGC ACAAGC TAG GCTTGC TTTTTTTAGTGCCAT TERM 2193 1796648 - 1796660 + g 73 -7.7 -3.90707 | overlap 1796647 GAACCACAAACCGCA CAAGC TAG GCTTG CTTTTTTTAGTGCCA pbp2a 1798924 - 1796729 - | penicillin-binding protein 2A TERM 2194 1798903 - 1798888 - G 77 -6.2 -4.56597 | opp_overlap 1798870 1798873 TTTCTTTTTTAAAAA GAGAAA GAAA TTTCTC AAATAATTTATCTAA rluD 1799011 - 1799886 + | ribosomal large subunit pseudouridine synthase D TERM 2195 1799901 - 1799877 - T 86 -5.8 -5.43514 | opp_overlap 1799880, overlap 1799880 AAAAGAATTAAAAAA GAATGGATGA TCGTG TCATCCATTT TTCCATATAAAAAAG TERM 2196 1799880 - 1799898 + T 86 -8.2 -4.70659 | opp_overlap 1799880 1799877 AGAATTAAAAAAGAA TGGATGAT CGT GTCATCCA TTTTTCCATATAAAA TERM 2197 1799898 - 1799880 - T 83 -7.5 -4.73828 | opp_overlap 1799880, overlap 1799877 AGAATTAAAAAAGAA TGGATGA TCGTG TCATCCA TTTTTCCATATAAAA TERM 2198 1799935 - 1799916 - T 85 -6.4 -5.36441 | opp_overlap 1799916, overlap 1799925 TTTCCATATAAAAAA GCAAGACC ACAA AGCCTTGC TTTCTATCAACTCAA gapA 1801033 - 1799954 - | glyceraldehyde-3-phosphate dehydrogenase TERM 2199 1800625 - 1800637 + g 82 -7.7 -4.64598 | CAACTTTTTTAGCTC CACCT TTA AGGTG TTTTTCAGCTGCTTC spr1826 1802118 - 1801138 - | hypothetical protein TERM 2200 1801352 - 1801342 - G 70 -3.2 -4.8622 | TTGTGCAACCAAAAA TGCC AGC AGCA AGGCGATGCCTACAA transposase_B 1802484 - 1802161 - | transposase TERM 2201 1802190 - 1802230 + g 72 -9.3 -3.30658 | gap 1, opp_overlap 1802190 1802200, overlap 1802200 AGCAGGATAAAAAAG CCTCGTAAAAGGTATTGC AACTTG GTAATACCTTTT-TGAGG TGCTTTTTGATATGA TERM 2202 1802200 - 1802221 + g 71 -5.2 -4.652 | opp_overlap 1802190 1802200, overlap 1802190 AAAAGCCTCGTAAAA GGTATTGC AACTTG GTAATACC TTTTTGAGGTGCTTT transposase_A 1803011 - 1802664 - | transposase TERM 2203 1802941 - 1802963 + g 72 -3.4 -5.0133 | TCTGTTATACTACCT GTTCGCTC ACAATAA GAGAGAAC TTTTTTACGAAAATC nadC 1804023 - 1803124 - | nicotinate-nucleotide pyrophosphorylase TERM 2204 1804109 - 1804130 + H 100 -8.9 -6.06529 | opp_overlap 1804103 1804111 1804114 TCTAACAAGTGTCAA TACAATTGT CAAG ACAATTGTA TTTTTTTTGTGTATA spr1830 1804233 - 1805543 + | hypothetical protein TERM 2205 1805794 - 1805749 - T 100 -12.8 -4.93316 | gap 1, opp_overlap 1805759 CAAGAATATGAAAAA TATGAAGAAAGTGCGTTCCCA GGACA TGGGAGCGCAC-TTCGTCATA CTCAATTTGAGATAT TERM 2206 1805759 - 1805785 + T 95 -14.5 -3.23395 | opp_overlap 1805749 AAAAATATGAAGAAA GTGCGTTCCCA GGACA TGGGAGCGCAC TTCGTCATACTCAAT spr1831 1806103 - 1805909 - | hypothetical protein TERM 2207 1806146 - 1806126 - R 88 -7.1 -4.86621 | overlap 1806134 ATTCGTAATGAAAAA TAAAAAAAT AAA ATTTTTTTA AATGATTATGATTCA TERM 2208 1806146 - 1806134 - R 95 -3.5 -6.20267 | overlap 1806126 TGAAAAATAAAAAAA TAAAA TTT TTTTA AATGATTATGATTCA spr1832 1807291 - 1806563 - | hypothetical protein bgl2 1807407 - 1808858 + | Beta-glucosidase ptcC 1808876 - 1810171 + | PTS system, IIC component ptcB 1810176 - 1810484 + | PTS system, IIB component ptcA 1810463 - 1810789 + | PTS system, IIA component TERM 2209 1810806 - 1810787 - T 72 -5 -4.72007 | opp_overlap 1810787, overlap 1810789 CTCTATCAAAATAAA TAGGAACA CTGT CGTTCCCA TCTGTCTTTATTAAT TERM 2210 1810870 - 1810902 + T 100 -10.7 -5.16132 | opp_overlap 1810861 1810870 ACAAAATGATTGAAA GGATTGGATCCTG CATTACA CAAGATCCAATCC TTTTCTTTTACTCTA TERM 2211 1810902 - 1810870 - T 100 -14.3 -3.77014 | opp_overlap 1810870, overlap 1810861 ACAAAATGATTGAAA GGATTGGATCCTGCA TTA CACAAGATCCAATCC TTTTCTTTTACTCTA TERM 2212 1811586 - 1811624 + T 100 -16.3 -4.46212 | gap 1, opp_overlap 1811586 TCAATATCATAAAAA GGCATCCTATCAGGTGTT CAAA AAC-CTTGATAGGATGCC TTTTATCATAGAAAA TERM 2213 1811624 - 1811586 - T 100 -14.1 -4.98436 | gap 1, opp_overlap 1811586 TCAATATCATAAAAA GGCATCCTATC-AGGTGT TCAA AAACCTTGATAGGATGCC TTTTATCATAGAAAA TERM 2214 1811656 - 1811666 + T 79 -5.4 -5.1485 | GTACTGGATCTTTCC CTCA AAT TGAG TTTTTGTCTTGCTTC adhE 1814369 - 1811697 - | bifunctional acetaldehyde-CoA/alcohol dehydrogenase TERM 2215 1813472 - 1813484 + g 81 -2.7 -5.63517 | opp_overlap 1813464, overlap 1813464 AGCAGAACTCTTCAA GAAGA GCT TTTTC TTTTTTGTTTACAAA TERM 2216 1814531 - 1814541 + r 80 -2.6 -5.63517 | overlap 1814524 GAAGTTTGTGAAATT TATT TCA AATA TTTTTTATTTCACAA TERM 2217 1814623 - 1814650 + r 79 -5.6 -5.06414 | opp_overlap 1814626 1814628, overlap 1814627 1814628 ACCTTGTAATTCTAA TAATACCTCCTT TGAT AAGGAGGCTTTA TTTTTGTTGAAAAAC TERM 2218 1814627 - 1814646 + r 84 -6.4 -5.05606 | opp_overlap 1814626 1814628, overlap 1814623 1814628 TGTAATTCTAATAAT ACCTCCTT TGAT AAGGAGGC TTTATTTTTGTTGAA TERM 2219 1814628 - 1814645 + r 82 -9.9 -3.61737 | opp_overlap 1814626 1814628, overlap 1814627 1814623 GTAATTCTAATAATA CCTCCTT TGAT AAGGAGG CTTTATTTTTGTTGA TERM 2220 1814645 - 1814628 - R 81 -9.9 -3.42069 | opp_overlap 1814628 1814627 1814623, overlap 1814626 GTAATTCTAATAATA CCTCCTT TGAT AAGGAGG CTTTATTTTTGTTGA spr1838 1815058 - 1814648 - | hypothetical protein spr1839 1815488 - 1815060 - | phosphotyrosine protein phosphatase TERM 2221 1815532 - 1815515 - R 73 -4.1 -4.96848 | opp_overlap 1815515 TCTTTTATAGAAAAA CGGGA GTTCGTGA TCCCG TCTTATTTTTCAATT yajC 1815834 - 1815535 - | preprotein translocase subunit YajC TERM 2222 1815941 - 1815924 - R 79 -5.5 -5.06414 | opp_overlap 1815925 1815937, overlap 1815925 TTCTGGTAAGAAAAA CCAGAGC TTAC GCCCTGA TTTTTAGGATTATTT tktA 1817927 - 1815951 - | transketolase TERM 2223 1816138 - 1816152 + g 70 -8.6 -3.33671 | CGGCGGACTGCATTT GGAAGA ATC TCTTCC TTGTAAGCTGCATCT TERM 2224 1818019 - 1817992 - R 78 -7.2 -4.37502 | overlap 1817986 ACTATTATATGAAAA TTATCCGTAT CATGCAAC ATACGGATAA CCTCCAAAGAATATT spr1842 1819132 - 1818041 - | putative L-ascorbate 6-phosphate lactonase TERM 2225 1819237 - 1819201 - R 76 -3.8 -5.36314 | gap 1, opp_overlap 1819213 1819224, overlap 1819203 1819213 CAAAACACTAAAAAA GACCAA-GAAAAACACA GGTT TGTGTTCATCATTGGAC TGTCCTTCAAATATC TERM 2226 1819224 - 1819213 - R 76 -4.4 -5.20606 | opp_overlap 1819213, overlap 1819203 1819201 AAAGACCAAGAAAAA CACA GGTT TGTG TTCATCATTGGACTG spr1843 1820917 - 1819244 - | hypothetical protein TERM 2227 1820092 - 1820077 - G 71 -4.8 -4.55295 | GTCCTGACAAAGAAA TTTCAA ACTT TTGAAA CAACCGTTCTCCTAA araD 1821800 - 1821096 - | L-ribulose-5-phosphate 4-epimerase sga 1822665 - 1821802 - | putative L-xylulose 5-phosphate 3-epimerase TERM 2228 1822143 - 1822155 + g 70 -3.4 -4.96848 | ATACAAAGAGGAAGG GAGA GTCAA TCTC TTTTTCTATAGCCAA ulaD 1823334 - 1822669 - | 3-keto-L-gulonate-6-phosphate decarboxylase PTS-EII 1823836 - 1823351 - | PTS system, IIA component TERM 2229 1823905 - 1823857 - R 95 -13.3 -3.64703 | gap 1 CCTCCTTTATTTAAA GAGGGAGAAGGACAGAAAC-GA TAACTC TCAGTTTCTGTCCAGCCCCCTC CAACCTTTTACTGTA PTS-EII 1824194 - 1823913 - | PTS system, IIB component ulaA 1825674 - 1824217 - | ascorbate-specific PTS system enzyme IIC TERM 2230 1825774 - 1825738 - R 76 -3.8 -5.29846 | gap 1, opp_overlap 1825761, overlap 1825740 AAGCGCAAACAAAAA GACCAAGAATTACACAG CGGA CTGT-TCACTCTTGGAC TGTATGATTTATGAT spr1850 1826428 - 1825805 - | hypothetical protein TERM 2231 1826458 - 1826472 + r 71 -5.7 -4.60317 | opp_overlap 1826458, overlap 1826453 CTAACTAGCAAAAAA TCAGG ATAAA CCTGA TTTTACTTATTCTGT TERM 2232 1826472 - 1826458 - R 82 -5.7 -5.2189 | opp_overlap 1826453 1826458 CTAACTAGCAAAAAA TCAGG ATAAA CCTGA TTTTACTTATTCTGT spr1851 1827465 - 1826479 - | hypothetical protein TERM 2233 1827231 - 1827242 + g 78 -3 -5.40072 | TCTTCACAGGCTCGT TCAA ATCA TTGA TTTTTTTCGGAACGC spr1852 1828314 - 1827484 - | SpoIIIJ family protein TERM 2234 1828173 - 1828159 - GR 72 -3.5 -5.05228 | ATCAAACGATAAAAA GCGAA TGATT TCCGC AAAGAAGTAAACCAA TERM 2235 1828218 - 1828202 - GR 82 -7.9 -4.63184 | opp_overlap 1828203 1828205, overlap 1828203 AATTTACTCCAAAAA TCAGCCG ATT CGGCTGT AATATCGCTAGTTAC TERM 2236 1828217 - 1828203 - GR 89 -11.4 -3.37188 | opp_overlap 1828203 1828205, overlap 1828202 ATTTACTCCAAAAAT CAGCCG ATT CGGCTG TAATATCGCTAGTTA TERM 2237 1828203 - 1828217 + gr 83 -11.4 -2.6574 | opp_overlap 1828202 1828203, overlap 1828205 ATTTACTCCAAAAAT CAGCCG ATT CGGCTG TAATATCGCTAGTTA rnpA 1828654 - 1828283 - | ribonuclease P TERM 2238 1828775 - 1828747 - R 88 -7.5 -4.91511 | ATTTCATCAGAAAAA GAAGCTGGAAAAA TAA CTTTCCCAACTCC TTGTATTGAATATTT ackA 1829993 - 1828803 - | acetate kinase spr1855 1830997 - 1830044 - | hypothetical protein TERM 2239 1830116 - 1830102 - G 73 -8.6 -3.74158 | overlap 1830100 AATTTCATTAAAACA CTTGCA TCT TGCAAG CTAGCAAGTGGATAA TERM 2240 1831069 - 1831047 - R 88 -7.1 -4.9725 | gap 1, opp_overlap 1831047 ATCCTTATAGAAAAA TCACTC-CCT GACT AGGCGAGTGA TTTTTGGGCTACTAT TERM 2241 1831047 - 1831069 + r 80 -7.1 -4.63928 | gap 1, opp_overlap 1831047 ATCCTTATAGAAAAA TCACTC-CCT GACT AGGCGAGTGA TTTTTGGGCTACTAT spr1856 1831438 - 1831058 - | hypothetical protein spr1857 1831652 - 1831470 - | hypothetical protein spr1858 1832202 - 1831789 - | hypothetical protein TERM 2242 1832033 - 1832064 + g 78 -3 -5.47159 | TGCTCAACCTTATCT TTGGTTCGTTTAGC CATA GCAAAAGCAACCAA TTTTTCTTTATTCAA spr1859 1832686 - 1832180 - | hypothetical protein cglD 1833351 - 1832869 - | competence protein CglD cglC 1833592 - 1833266 - | competence protein CglC cglB 1834685 - 1833594 - | competence protein CglB TERM 2243 1834500 - 1834488 - GR 84 -7.7 -4.66163 | overlap 1834474 1834495 ACTCCTATCTAAAAA GGAGA TAG TCTCC ACCAGATGAAAACCG TERM 2244 1834558 - 1834571 + gr 79 -5.3 -5.1287 | ATGATATTTTTTTGC TTAGC TGTA GCTAA TTTTTTCCGTCTCAG cglA 1835499 - 1834558 - | competence protein CglA TERM 2245 1835168 - 1835156 - GR 70 -3.3 -4.98531 | overlap 1835157 TCCTGAAACCAAAAA TGCAG GTC CTGCT CCTCATCGTGCAACA TERM 2246 1835568 - 1835550 - R 91 -2.4 -6.23317 | AGAAAAATAAAAAAA GCAACTCC AAA AAAGTTAC TTTTCTCTATTTTAA spr1865 1835946 - 1835575 - | hypothetical protein TERM 2247 1836054 - 1836030 - R 89 -7.2 -5.24129 | opp_overlap 1836030 1836032, overlap 1836032 TTTTTTGATAAAAAA TCCAGCCATC TGATG GATGACTGAA TTTCTATTTACTTAT adh 1837149 - 1836091 - | zinc-containing alcohol dehydrogenase TERM 2248 1837034 - 1837046 + g 71 -4.8 -4.62069 | ATATGGAGGTCTGTT CCAC AAATA GTGG TTTTTACAATACGCA TERM 2249 1837303 - 1837279 - R 100 -15.9 -5.24531 | opp_overlap 1837279 ACCCTGCATAAAAAA GCAGAAGTTAG TCT CTAACTTCTGC TTTCTCTCTTATGCT TERM 2250 1837279 - 1837303 + r 100 -15.9 -4.25389 | opp_overlap 1837279 ACCCTGCATAAAAAA GCAGAAGTTAG TCT CTAACTTCTGC TTTCTCTCTTATGCT nagA 1838463 - 1837312 - | N-acetylglucosamine-6-phosphate deacetylase TERM 2251 1838577 - 1838596 + r 71 -6.4 -4.20875 | opp_overlap 1838577, overlap 1838572 GGAGATATTTTAAAA GAGCTGGA TTTC TCCAACTC TTCTCTTTTTTAATA TERM 2252 1838596 - 1838577 - R 85 -8.6 -4.18401 | opp_overlap 1838577 1838572 GGAGATATTTTAAAA GAGCTGGA TTTC TCCAACTC TTCTCTTTTTTAATA spr1868 1840433 - 1838616 - | hypothetical protein TERM 2253 1840515 - 1840484 - R 88 -7.5 -4.8487 | opp_overlap 1840490, overlap 1840490 CTATCAAAAAAAGAA GAAAAATCCTAAG AGAAAA CTTAGGATTTTTT TATATCAATTCCATT TERM 2254 1840509 - 1840490 - R 87 -6.5 -5.54403 | opp_overlap 1840490, overlap 1840484 AAAAAAGAAGAAAAA TCCTAAG AGAAAA CTTAGGA TTTTTTTATATCAAT TERM 2255 1840490 - 1840509 + r 89 -6.5 -5.72616 | opp_overlap 1840490 1840484 AAAAAAGAAGAAAAA TCCTAAG AGAAAA CTTAGGA TTTTTTTATATCAAT tgt 1841673 - 1840531 - | queuine tRNA-ribosyltransferase TERM 2256 1841709 - 1841740 + H 100 -15.4 -4.36914 | gap 1, opp_overlap 1841716 AAAGACAGTCCCAGT TCATACAGTGTG-CC CAA GGACACACTGTATGA TTTTATCAAAAAAAG spr1870 1841803 - 1842660 + | hypothetical protein pcp-truncation 1842903 - 1842688 - | pyrrolidone carboxyl peptidase, truncation pcp-truncation 1843214 - 1842900 - | pyrrolidone carboxyl peptidase, truncation TERM 2257 1842941 - 1842957 + g 76 -3.6 -5.31456 | opp_overlap 1842941 GCCGTATTGGAAACA GAGGCC GGTAA GCCCTC TTTTTTATAGCTTGA spr1873 1843770 - 1843471 - | hypothetical protein TERM 2258 1843744 - 1843733 - G 74 -4.4 -4.95854 | overlap 1843743 TAAAAAATGTAAAAA TGCT CCAA AGCA ACGATCGTTGTTAAA marR 1844119 - 1843781 - | MarR family transcriptional regulator TERM 2259 1844378 - 1844398 + r 73 -8.3 -3.60296 | overlap 1844379 AGCTAGTCGCAGGTT GCTCAAAGC ACA GCTTTGAGG TTTCAGATAAAACTG TERM 2260 1844379 - 1844397 + r 84 -11.8 -2.75963 | overlap 1844378 GCTAGTCGCAGGTTG CTCAAAGC ACA GCTTTGAG GTTTCAGATAAAACT TERM 2261 1844499 - 1844457 - R 80 -2.8 -5.73978 | gap 1 ATGACAAAGAAAAAA CGAACGAGA-ATCGCTTCC TATCAC GAAAGCTAGATCTCATTCG TCAAAATGATGTTAC spr1875 1845667 - 1844525 - | hypothetical protein TERM 2262 1845740 - 1845729 - R 93 -7.2 -5.68039 | opp_overlap 1845728 1845729 AAATGTAGAAAAAAA GCCC TCTC GGGC CTATTTAACAGAACT spr1876 1846453 - 1845833 - | hypothetical protein MATE_transporter 1847737 - 1846457 - | MATE family transporter TERM 2263 1847448 - 1847438 - G 79 -5.4 -4.91459 | GAAGATGGACAAAAA TCCT AAA AGGA AACTTAATAGTAAGG TERM 2264 1847761 - 1847782 + r 79 -8.7 -3.78736 | opp_overlap 1847761 CCTGATGAAAAGAAA CTCAGTTGG TTTC CCAACCGAG TTTACTCCCTCTATC TERM 2265 1847782 - 1847761 - R 100 -10.9 -4.72007 | opp_overlap 1847761 CCTGATGAAAAGAAA CTCAGTTGG TTTC CCAACCGAG TTTACTCCCTCTATC thrC 1849282 - 1847798 - | threonine synthase TERM 2266 1848667 - 1848677 + g 70 -5.4 -4.42806 | opp_overlap 1848667 1848665 CCACGTCGTTAAACA TGTG CTT CACA TTTGTTTGCGCATCG spr1879 1850635 - 1849358 - | hypothetical protein TERM 2267 1850728 - 1850706 - R 77 -3.3 -5.57729 | AAATAATATAAAAAA GGAACGAAG AATAA CAACGTTCC TAACACTATACTATA TERM 2268 1854572 - 1854591 + r 91 -12.2 -3.62096 | opp_overlap 1854571 1854570 TGCAGTCCTACAACC CCGAAGAG TAAA CTCTTCGG TTTGCCCTCCTGCCG TERM 2269 1856674 - 1856688 + r 95 -8.6 -4.89605 | GAGTTCTCACTCATT TCTGTC ACT GACAGA TTTATTGTTTTTTTC TERM 2270 1857094 - 1857078 - R 80 -2.9 -5.58454 | CTTATAGTAAAAAAA GCCAGAA TTA TACTGAC TCTTCTATCGCTCAT spr1880 1857533 - 1857099 - | cytidine/deoxycytidylate deaminase family protein TERM 2271 1857271 - 1857284 + g 75 -8.1 -4.03234 | opp_overlap 1857260 GGCATGGCTGAACTT CCACC ATAA GGTGG TTTGTCTCGAAAGGC gltX 1859007 - 1857547 - | glutamyl-tRNA synthetase TERM 2272 1858624 - 1858647 + g 70 -8.2 -3.68222 | gap 1 AAGGTATTCATTGAT GTAGCGTGGTG TTT CGCCA-GCTAC TTCTTGGCGTTCGCG TERM 2273 1859099 - 1859125 + r 75 -8.1 -3.75378 | opp_overlap 1859104, overlap 1859104 ATGGATAAAGAGAGT AAAAAGAGTGG GCAAA CCACTCTTTTC TTCTATTATAGACGT TERM 2274 1859120 - 1859104 - R 90 -8 -4.90217 | opp_overlap 1859099 1859104 TAAAGAGAGTAAAAA GAGTGG GCAAA CCACTC TTTTCTTCTATTATA TERM 2275 1859104 - 1859120 + r 90 -8 -4.92791 | opp_overlap 1859104, overlap 1859099 TAAAGAGAGTAAAAA GAGTGG GCAAA CCACTC TTTTCTTCTATTATA pgi 1860480 - 1859131 - | glucose-6-phosphate isomerase spr1883 1860646 - 1860467 - | hypothetical protein guaA 1861387 - 1860650 - | glutamine amidotransferase TERM 2276 1861470 - 1861452 - R 76 -4.5 -5.20333 | overlap 1861446 TATGGACAAGAAAAA GCTGCCC ACATA GGACAAC TTCTTTCTTATTCGA ABC-NP 1863289 - 1861478 - | ABC transporter permease/ATP-binding protein transposase_F 1863387 - 1863701 + | degenerate transposase ABC-NP 1865725 - 1864031 - | ABC transporter permease/ATP-binding protein TERM 2277 1865689 - 1865703 + g 83 -3.5 -5.54907 | opp_overlap 1865682 GGAGCGAAGCCAGGG CCTGC CACTT GTAGG TTTTTATTTTCTGAA TERM 2278 1865775 - 1865752 - R 70 -3.8 -4.84582 | gap 1, opp_overlap 1865753, overlap 1865747 1865753 AAAAAATAGACAAAA GGGAGC-GACA ATG CGTCAGCTCCT TTTCATTCTGTTTGT TERM 2279 1865753 - 1865774 + r 76 -6.6 -4.58724 | gap 1, opp_overlap 1865753 1865752 1865747 AAAAATAGACAAAAG GGAGC-GAC AATGC GTCAGCTCC TTTTCATTCTGTTTG hexA 1868445 - 1865872 - | DNA mismatch repair protein TERM 2280 1868371 - 1868339 - G 80 -4.3 -5.32699 | opp_overlap 1868339 1868342 CGAAAGAGCAAAAAA GCATCTGGATATT GCTTTTT AATATCCACATAC TGTTGCATGCCGGGT TERM 2281 1868459 - 1868430 - G 91 -9.5 -4.56597 | gap 1, opp_overlap 1868430 1868429 1868432 1868433, overlap 1868433 TCTCCTTTTCAAAAA TAA-GTCTTGAGAG CAA CTCCCAAGACCTTA CTTATCTTTCATCAA TERM 2282 1868455 - 1868433 - G 100 -12.8 -4.40561 | opp_overlap 1868433 1868432 1868430 1868429, overlap 1868430 CCTTTTCAAAAATAA GTCTTGAGAG CAA CTCCCAAGAC CTTACTTATCTTTCA TERM 2283 1868433 - 1868455 + g 76 -10.6 -2.74334 | opp_overlap 1868430 1868433, overlap 1868432 1868430 1868429 CCTTTTCAAAAATAA GTCTTGAGAG CAA CTCCCAAGAC CTTACTTATCTTTCA argR 1868903 - 1868457 - | arginine repressor TERM 2284 1868542 - 1868528 - G 73 -7.2 -4.07133 | overlap 1868535 GATCTCGACAAATAA CCAATA AGG TATTGG CACCAGCAACTGTTC TERM 2285 1869274 - 1869264 - g 73 -5.4 -4.58283 | opp_overlap 1869258 CAAGCCTTTGAAAAA GTTG TCG CAAC AGGACCTTACGTTAA argS 1869051 - 1870742 + | arginyl-tRNA synthetase TERM 2286 1870781 - 1870752 - T 90 -11.7 -3.64236 | gap 1, overlap 1870744 ATGTAAATCGCCAAA GTTACTT-GATTGC AAA GCAATCTAAGTAAC TAACGCCAAATCCTA IS1381 1871446 - 1871057 - | tranposase (orf2) TERM 2287 1871115 - 1871157 + g 70 -3.6 -4.98531 | overlap 1871102 ATTCGTAATCCGAAG CGTTTACGATGATTTCGATA GGT TGTTGAAAATATTTTAAACG TTTTTACTTTGGCAA spr1892 1871577 - 1872086 + | hypothetical protein phoP_pnpR 1872170 - 1872877 + | response regulator phoR-pnpS 1872878 - 1874209 + | sensor histidine kinase PnpS TERM 2288 1874237 - 1874255 + F 93 -8.2 -5.73672 | CTATTTTTAGGAGCA GCCATTTT TCA AAAGTGGC TTTTTTTGATTCTTT TERM 2289 1874590 - 1874575 - g 85 -4 -5.61596 | overlap 1874582 ACGGTGATAAAAAAA TTGACA ACAC TGCCAA AACAGCTGTGATTCA pstS 1874313 - 1875251 + | phosphate ABC transporter phosphate-binding protein TERM 2290 1875322 - 1875340 + F 71 -7.4 -3.69809 | opp_overlap 1875322 1875319 1875315, overlap 1875319 TAAAGAAGGCAAGTA GGGAGGTG TCG TATCTCCC TTACTTTCTTCACTA pstC 1875369 - 1876232 + | ABC transporter membrane-spanning permease - phosphate transport pstA 1876225 - 1877040 + | ABC transporter membrane-spanning permease - phosphate transport pstB 1877042 - 1877794 + | phosphate ABC transporter ATP-binding protein phoU 1877809 - 1878459 + | phosphate transporter PhoU TERM 2291 1878483 - 1878500 + F 77 -3.4 -5.39755 | ATCCTTAAAAGAGAA GAGTAC GATTAA GTGCTC TTTTTTATGGTTGTA transposase-truncation 1878527 - 1878943 + | truncated IS1380-Spn1 transposase spr1901 1879584 - 1879066 - | transcriptional regulator TERM 2292 1879380 - 1879390 + g 70 -5.4 -4.33754 | TTGTTAGTGTTGGTC TGGA TTC TCCA TTTTCAATTCTAATT gpsA 1879718 - 1880734 + | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase galU 1880756 - 1881655 + | UTP-glucose-1-phosphate uridylyltransferase TERM 2293 1881664 - 1881688 + T 70 -2.2 -5.26875 | opp_overlap 1881658 GGAATAAAATAAAAA GATAAGGT TCAAAAAAT GCCTTATC TTTTTTCATTACACA spr1904 1882402 - 1881722 - | hypothetical protein spr1905 1882928 - 1882383 - | 5-formyltetrahydrofolate cyclo-ligase family protein TERM 2294 1882485 - 1882469 - G 72 -9.5 -3.03474 | TTTGACAAGGATATA TCGTACT CAA AGTACGA CCAGAAAAATGTTCC hipO 1884064 - 1882934 - | putative several hippurate hydrolase and amino acid amidohydrolase; can be a peptidase too TERM 2295 1884091 - 1884115 + r 87 -6.5 -5.46698 | gap 1, opp_overlap 1884091 CCGATATAGCAGAAA GAGGCTGGAA AAAGGG TTCC-GCCTC TTTTTTACTTTTACA dapD 1884830 - 1884132 - | 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase TERM 2296 1884624 - 1884610 - G 73 -10 -2.84794 | overlap 1884607 GGAACTGCAGAATTA CGAGCA TCT TGCTCG ACAACATAATCTTGA TERM 2297 1884893 - 1884876 - R 76 -4.1 -5.15634 | overlap 1884859 TATTCTACCAAAAAA GGCCTCA AATT TGAAACC TTTTTGTCTGTTTTT spr1908 1886193 - 1885060 - | hypothetical protein TERM 2298 1886022 - 1886000 - GR 100 -7.1 -5.83211 | gap 1, opp_overlap 1886000 CACGAAAAGAAAAAA GTGGC-AATC CATT GATTGGCCAC TTCATTTAGAGAATT pbp1b 1888501 - 1886036 - | penicillin-binding protein 1B TERM 2299 1888377 - 1888390 + gH 78 -3.9 -5.2189 | AAAATGGCTGACTTA TCTAA GGTT TTAGA TTTTTTGGTACTTGA TERM 2300 1888449 - 1888467 + gH 100 -11.8 -5.13016 | overlap 1888454 TTATTTTTTTGTTTT TGCTGGAA AAA TTCCAGCA TTTTTCGTTTTAATT tyrS 1888643 - 1889899 + | tyrosyl-tRNA synthetase TERM 2301 1889927 - 1889953 + T 81 -6 -4.89233 | gap 1, opp_overlap 1889927 TTATCTATAAACAAA GGAGTTAACCT CGAGAA AGGT-AACTCC TTTTTGCTGTTAATA TERM 2302 1889953 - 1889927 - T 76 -6.7 -4.57482 | gap 1, opp_overlap 1889927 TTATCTATAAACAAA GGAGTTAACCTC GAGA AAGGT-AACTCC TTTTTGCTGTTAATA ctpC 1892049 - 1889977 - | P-type ATPase - metal/cation transport TERM 2303 1891183 - 1891201 + g 75 -9.6 -3.34506 | opp_overlap 1891182 1891185 CTTCATCAACTCAAT CAGCTGTA AAA TACGGCTG TTCATCTGATTATCT spr1912 1892353 - 1892042 - | hypothetical protein rrmA 1892472 - 1893320 + | rRNA (guanine-N1-)-methyltransferase TERM 2304 1893366 - 1893378 + T 73 -7.7 -3.83205 | CCGTACGTATGGTTA CTGAC TTC GTCAG TTTCATCTACAACCT TERM 2305 1893410 - 1893392 - T 78 -10.4 -2.61383 | opp_overlap 1893391, overlap 1893391 AGTTTCATCTACAAC CTCAAAAC CAT GTTTTGAG CTGACTTCGTCAGTT TERM 2306 1893411 - 1893423 + T 82 -7.7 -4.52857 | AAACCATGTTTTGAG CTGAC TTC GTCAG TTTTATCTGCAACCT spr1914 1894042 - 1893836 - | hypothetical protein TERM 2307 1894017 - 1894030 + g 78 -2.5 -5.44721 | AAATCCGTCCATTTA TATTT TGAA AAATA TTTTTTTAACATAAT spr1915 1894119 - 1894691 + | hypothetical protein TERM 2308 1894800 - 1894823 + T 71 -9 -3.03554 | gap 1, opp_overlap 1894806, overlap 1894803 GGTGGATCAGCATTG CAATG-ACGAC TTC GTCGTACATTG TATATAATTACTTAA TERM 2309 1894890 - 1894846 - T 100 -11.1 -5.30616 | gap 1, opp_overlap 1894848 1894850 1894855, overlap 1894848 1894850 TTACTTAAAGAAAAA GAG-AGAAAAGGAATGATCT TATACC AGATCATTCCTTTTCTGCTT TCTGTAAATCCCTCG TERM 2310 1894848 - 1894888 + T 100 -13.7 -4.06678 | gap 1, opp_overlap 1894848 1894846 1894850, overlap 1894850 1894855 ACTTAAAGAAAAAGA G-AGAAAAGGAATGATCT TATACC AGATCATTCCTTTTCTGC TTTCTGTAAATCCCT TERM 2311 1894887 - 1894848 - T 100 -13.9 -4.2793 | opp_overlap 1894848 1894850 1894855, overlap 1894846 1894850 ACTTAAAGAAAAAGA GAGAAAAGGAATGATCT TATACC AGATCATTCCTTTTCTG CTTTCTGTAAATCCC TERM 2312 1894885 - 1894850 - T 100 -16.5 -3.71991 | opp_overlap 1894848 1894850 1894855, overlap 1894848 1894846 TTAAAGAAAAAGAGA GAAAAGGAATGATCT TATACC AGATCATTCCTTTTC TGCTTTCTGTAAATC TERM 2313 1894850 - 1894885 + T 100 -16.5 -3.07132 | opp_overlap 1894850 1894848 1894846, overlap 1894848 1894855 TTAAAGAAAAAGAGA GAAAAGGAATGATCT TATACC AGATCATTCCTTTTC TGCTTTCTGTAAATC TERM 2314 1894855 - 1894880 + T 100 -10.6 -4.6575 | opp_overlap 1894850 1894848 1894846, overlap 1894850 1894848 GAAAAAGAGAGAAAA GGAATGATCT TATACC AGATCATTCC TTTTCTGCTTTCTGT TERM 2315 1894919 - 1894941 + T 83 -11.4 -2.89921 | overlap 1894911 CGGAGTGTGTTTGGC GCTTTGATAC GAA GTGTCAAAGC TGTATAAACGTTACT TERM 2316 1895221 - 1895195 - T 100 -11 -5.27769 | opp_overlap 1895198 AGAAAAAACTAAAAA GAATGTAGGG TTTATTT CCCTACATTC TTAAAATAACTTAGT TERM 2317 1895587 - 1895566 - T 100 -9.5 -5.11613 | opp_overlap 1895552 1895566 ACAGCATTTAAAAAA GCGAATTTC AATC GAAACTCGC TTTTTTACAAAATGT TERM 2318 1895566 - 1895587 + T 88 -7.3 -5.02476 | opp_overlap 1895566, overlap 1895552 ACAGCATTTAAAAAA GCGAATTTC AATC GAAACTCGC TTTTTTACAAAATGT malP 1897994 - 1895736 - | maltodextrin phosphorylase TERM 2319 1896641 - 1896662 + g 71 -5.3 -4.60487 | gap 1, overlap 1896633 1896641 1896642 TTTCTTTGACAGCTG CT-TTGTCTT CAT AAGACAAAAG TTTTTCAAGCTCATC TERM 2320 1897864 - 1897877 + g 81 -6.7 -4.7078 | TAAACTTTTTTCTTA CCAGT GTTG ACTGG TTTTTGGCTGCTTGC malM 1899537 - 1898020 - | 4-alpha-glucanotransferase TERM 2321 1899640 - 1899652 + H 83 -4.9 -5.43514 | overlap 1899644 AGCATAATTGCAAGC GTTTT TAA AAAAC TTTTTTGATTATTTT TERM 2322 1899848 - 1899827 - H 75 -8.7 -3.4376 | gap 1, opp_overlap 1899827 AGATAGGGATTAGAA CCAGG-GAGG TAG CCCCTCCTGG TTTCCCTCTTTAGAC TERM 2323 1899827 - 1899848 + H 73 -7.9 -3.81137 | opp_overlap 1899827 AGATAGGGATTAGAA CCAGGGAGG TAGC CCCTCCTGG TTTCCCTCTTTAGAC TERM 2324 1901108 - 1901092 - g 73 -2.3 -5.30348 | overlap 1901095 ACTGAACAACAAAAA GTATTAT ATG ATAAGAC TAACGAAATCCCAGC malX 1900087 - 1901358 + | maltose/maltodextrin ABC transporter, maltose/maltodextrin-binding protein TERM 2325 1901970 - 1901984 + G 72 -8.6 -3.56594 | overlap 1901949 AAGTTGTTGGACTGG GTTGGT TTG ACCAAC TTTACAAACATTTGG TERM 2326 1902170 - 1902182 + G 70 -9.1 -3.22068 | TTTCCTTCTTCCTTG GGCTG TCC CAGCC TTCATCACTATCTTG malC 1901454 - 1902761 + | maltodextrin ABC transporter, permease protein malD 1902742 - 1903605 + | maltodextrin ABC transporter, permease protein TERM 2327 1903613 - 1903599 - f 73 -8.6 -3.29043 | opp_overlap 1903586, overlap 1903586 AAGTGGTGGCGACAA GGGATA ATT TATCCC CGCCACCCTTTTTCA malA 1903858 - 1904658 + | MalA protein malR 1904668 - 1905654 + | maltose operon transcriptional repressor TERM 2328 1905687 - 1905725 + T 100 -17 -4.34402 | opp_overlap 1905687 CGTTAAAAGCAAAAA CGCATAGTATCAGGTATT GAA AAAACTTGATACTATGCG TTTTAATGTGGGAAG TERM 2329 1905725 - 1905687 - T 100 -14.8 -5.0925 | opp_overlap 1905687 CGTTAAAAGCAAAAA CGCATAGTATCAGGTATT GAA AAAACTTGATACTATGCG TTTTAATGTGGGAAG TERM 2330 1905736 - 1905750 + T 71 -5.7 -4.47328 | ATGCGTTTTAATGTG GGAAG ATTTA CTTCC TTTTCTACTGAAATT TERM 2331 1905837 - 1905855 + T 78 -10.4 -2.61383 | overlap 1905836 GCTAGCCGCAGGTTG CTCAAAAC ACT GTTTTGAG GTTGTAGATGAAACT TERM 2332 1905881 - 1905869 - T 73 -7.7 -3.83205 | AGGTTGTAGATGAAA CTGAC GAA GTCAG TAACCATACCTACGG spr1923 1906887 - 1905946 - | hypothetical protein TERM 2333 1906110 - 1906143 + g 91 -8.1 -5.35222 | overlap 1906111 GATTATAGGTTCCTT CTGCATCGTGGATCA TGGT TGCTCCGCGGTGCAA TTTTTTATGGATTTT TERM 2334 1906111 - 1906142 + g 88 -11.6 -3.78693 | overlap 1906110 ATTATAGGTTCCTTC TGCATCGTGGATCA TGGT TGCTCCGCGGTGCA ATTTTTTATGGATTT aspS 1908628 - 1906865 - | aspartyl-tRNA synthetase TERM 2335 1907068 - 1907055 - G 70 -8.1 -3.7108 | AGCCCGATAGCCAAA CCACC GTGT GGTGG GAAACCATAGTCCAT TERM 2336 1908432 - 1908422 - G 70 -5.4 -4.45738 | CACCTCAATAACAAA TTCG CTA CGAA GGCTTTCAGCTGTTG TERM 2337 1908808 - 1908820 + r 73 -7.7 -3.83205 | CCGTAGGTATGGTTA CTGAC TTC GTCAG TTTCATCTACAACCT TERM 2338 1908852 - 1908834 - R 78 -10.4 -2.61383 | opp_overlap 1908833, overlap 1908833 AGTTTCATCTACAAC CTCAAAAC CAT GTTTTGAG CTGACTTCGTCAGTT TERM 2339 1908853 - 1908865 + r 73 -7.7 -3.72695 | AAACCATGTTTTGAG CTGAC TTC GTCAG TTTCATCCACAACCT TERM 2340 1908897 - 1908879 - R 78 -10.4 -2.61383 | overlap 1908878 AGTTTCATCCACAAC CTCAAAAC AGT GTTTTGAG CAACCTGCGGCTAGC TERM 2341 1908974 - 1908956 - R 100 -9.6 -5.16133 | opp_overlap 1908956 1908955 AGTATAATACAAAAA TCCGATGA ACT TCACCGGA CTCTTTTATTTTGAA spr1925 1909210 - 1908980 - | hypothetical protein spr1926 1909869 - 1909228 - | hypothetical protein TERM 2342 1909788 - 1909776 - G 74 -9.1 -3.51976 | overlap 1909772 AAGCGCCTAAAGCAA GCGAC GCA GTCGC GAGCCCCTGAATAAA spr1927 1910621 - 1909881 - | hypothetical protein spr1928 1910818 - 1910618 - | hypothetical protein spr1929 1911030 - 1910815 - | transcriptional regulator TERM 2343 1910985 - 1910997 + g 77 -7.7 -4.14615 | GATTGAGACCATCGC GAGCT CGA AGCTC TTTTAGACGATTTTT spr1930 1911495 - 1911031 - | hypothetical protein TERM 2344 1911400 - 1911427 + g 89 -10.1 -4.2928 | GTAACACATCTTTTT CTTTTTGACAA ATATAG TTGTCAAAAAG TTTATGATTTTTGTC TERM 2345 1911481 - 1911460 - G 86 -4.4 -5.45802 | TTTGCAAAAGAAAAA GGTCAGGA GTAGGT TACTGACC AGTTTATCTATCATT TERM 2346 1911544 - 1911556 + r 73 -7.7 -3.83205 | CCGTAGGTATGGTTA CTGAC TTC GTCAG TTTCATCTACAACCT TERM 2347 1911588 - 1911570 - R 78 -10.4 -2.61383 | opp_overlap 1911569, overlap 1911569 AGTTTCATCTACAAC CTCAAAAC CAT GTTTTGAG CTGACTTCGTCAGTT TERM 2348 1911589 - 1911601 + r 71 -7.7 -3.52668 | AAACCATGTTTTGAG CTGAC TTC GTCAG TTCTATCCATAACTT hisS 1912960 - 1911671 - | histidyl-tRNA synthetase spr1932 1914285 - 1913038 - | hypothetical protein rgg 1915326 - 1914475 - | positive transcriptional regulator of glucosyltransferase and Spp phenotype spr1934 1915450 - 1915791 + | hypothetical protein TERM 2349 1915822 - 1915841 + T 100 -10 -4.77438 | opp_overlap 1915822 1915834 TTAAAGATGAAAAAA GCAAGCCG AAAA TGGCTTGC TTTTTGATACTCAAT TERM 2350 1915841 - 1915822 - T 100 -9.3 -5.32699 | opp_overlap 1915822, overlap 1915834 TTAAAGATGAAAAAA GCAAGCC GAAAAT GGCTTGC TTTTTGATACTCAAT TERM 2351 1915940 - 1915928 - T 71 -7.7 -3.52668 | AAGTTATGGATAGAA CTGAC GAA GTCAG TAACCATACCTACGG ilvD 1917703 - 1916000 - | dihydroxy-acid dehydratase TERM 2352 1916575 - 1916563 - G 74 -9.1 -3.52073 | opp_overlap 1916562 1916561 CGTTCAAGATGATAA GCGGA CCA TCCGC ACGTTTTGGATTTTC tktC 1918868 - 1917936 - | transketolase, C-terminal subunit tktN 1919722 - 1918865 - | putative transketolase n-terminal section ulaA 1921072 - 1919726 - | ascorbate-specific PTS system enzyme IIC spr1939 1921369 - 1921085 - | PTS system, IIB component, putative TERM 2353 1921198 - 1921182 - G 76 -10.9 -2.74701 | overlap 1921179 ACATCTCCAAGATGA CTAGCTG AAT CAGCTAG ATCACGACCAACAAT spr1940 1923403 - 1921373 - | hypothetical protein spr1941 1923594 - 1924601 + | hypothetical protein spr1942 1924604 - 1924804 + | hypothetical protein TERM 2354 1924809 - 1924838 + F 100 -9.4 -5.38348 | TTGATATTTAACACC TTCTCCTGTCTG CCGTGT CGGATAGGAGAA TTTTTTCATCTTTTT TERM 2355 1924845 - 1924885 + F 70 -8 -3.29987 | gap 1, overlap 1924843 1924849 1924856 ATAGGAGAATTTTTT CATCTTTTTTTGTCAAGTA ACTT TACTTTACAAAAAAA-ATG TGTTATCCTAGTATG TERM 2356 1924849 - 1924882 + F 75 -9.9 -2.5214 | overlap 1924845 1924843 1924856 GAGAATTTTTTCATC TTTTTTTGTCAAGTA ACTT TACTTTACAAAAAAA ATGTGTTATCCTAGT rpmF 1924956 - 1925138 + | 50S ribosomal protein L32 TERM 2357 1925295 - 1925268 - g 85 -8.6 -4.31412 | gap 1, opp_overlap 1925271 AAATACTCACCAAAA CTTC-GCAAACAC GTT GTGTTTACAGAAG TGAAGTAAGCATTCA rpmG 1925154 - 1925303 + | 50S ribosomal protein L33 TERM 2358 1925329 - 1925354 + T 82 -5.6 -5.24551 | gap 1, opp_overlap 1925329 1925335, overlap 1925335 CGAATCAATACAGAA GA-AAAACGCT TGATC AGCGTTTTTTC TTTTTGTTAATTTCA TERM 2359 1925335 - 1925347 + T 93 -4.8 -6.01725 | opp_overlap 1925329 1925335, overlap 1925329 AATACAGAAGAAAAA CGCT TGATC AGCG TTTTTTCTTTTTGTT TERM 2360 1925347 - 1925335 - T 80 -4.8 -5.28561 | opp_overlap 1925335 1925329, overlap 1925329 AATACAGAAGAAAAA CGCT TGATC AGCG TTTTTTCTTTTTGTT TERM 2361 1925743 - 1925722 - T 90 -8.1 -5.1925 | opp_overlap 1925722 TGAGAATCCAAAAAA TCTTCCTAC ATAT GTAAGAAGA TTTTTTAGTTCAGAA TERM 2362 1925722 - 1925743 + T 84 -5.9 -5.26875 | opp_overlap 1925722 TGAGAATCCAAAAAA TCTTCCTAC ATAT GTAAGAAGA TTTTTTAGTTCAGAA pcpA 1927855 - 1925783 - | choline binding protein PcpA TERM 2363 1926734 - 1926767 + g 100 -13.5 -4.69622 | gap 1, opp_overlap 1926734 AGATAATGTTAAAAA TTTTGGTAAAC-CGTT CAT AACGTGTTTACCAAAA TTTTTAACATTATCT TERM 2364 1926767 - 1926734 - G 100 -13.5 -4.69622 | gap 1, opp_overlap 1926734 AGATAATGTTAAAAA TTTTGGTAAAC-CGTT CAT AACGTGTTTACCAAAA TTTTTAACATTATCT TERM 2365 1927548 - 1927560 + g 70 -3.4 -4.84359 | ACGGTAAATACTTTA TCAC CTACT GTGA TTTTTGTAGGAATCG TERM 2366 1928086 - 1928029 - H 100 -30.7 -4.45664 | opp_overlap 1928037 TTAAGTCAAGGAAAA TTAACCCACTTTAATTTCTTTTTTAAC CCGT GTTAAAAAAGAAATTAAAGTGGGTTAA AAAAGAAATTAAAGT TERM 2367 1928037 - 1928078 + H 100 -19.3 -2.52464 | opp_overlap 1928029 AGGAAAATTAACCCA CTTTAATTTCTTTTTTAAC CCGT GTTAAAAAAGAAATTAAAG TGGGTTAAAAAAGAA TERM 2368 1928374 - 1928349 - g 83 -3.3 -5.60864 | overlap 1928351 1928366 GATAGATGAAAAAAA CATTGACACCT ACCA AAGAGTCAATA GACTCCCTGCGAAAC IS1381-truncation 1928212 - 1928781 + | degenerate transposase (orf1) TERM 2369 1928784 - 1928768 - f 79 -3.8 -5.40474 | ATCGCCCTAAAAAAA GAATTA GCGAA TAATTC TGGTAAAAAGAAATT TERM 2370 1929138 - 1929096 - g 70 -3.6 -4.98531 | overlap 1929130 TTGCCAAAGTAAAAA CGTTTAAAATATTTTCAACA ACC TATCGAAATCATCGTAAACG CTTCGGATTACGAAT IS1381 1928807 - 1929196 + | tranposase (orf2) spr1948 1929574 - 1929248 - | hypothetical protein TERM 2371 1929750 - 1929781 + r 73 -4.5 -4.9218 | gap 1, opp_overlap 1929755, overlap 1929752 1929755 TTCTTCTGTTTCACG CGA-AACACCCTGC GCCAA GCAAGGTGTTCTTG TTTTTATACTCAATG TERM 2372 1929775 - 1929755 - R 77 -9 -3.59979 | opp_overlap 1929752 1929750 1929755 CTGTTTCACGCGAAA CACCCTGC GCCAA GCAAGGTG TTCTTGTTTTTATAC TERM 2373 1929755 - 1929775 + r 74 -6.8 -4.36508 | opp_overlap 1929755, overlap 1929752 1929750 CTGTTTCACGCGAAA CACCCTGC GCCAA GCAAGGTG TTCTTGTTTTTATAC TERM 2374 1929835 - 1929853 + r 78 -10.4 -2.61264 | overlap 1929834 GCTAGCTGCAGGCTG CTCAAAAC ACT GTTTTGAG GTTGTAGATGGAAGC spr1949 1931780 - 1929900 - | glycosyl hydrolase-related protein spr1950 1932655 - 1931774 - | ROK family protein TERM 2375 1932697 - 1932661 - R 73 -4.4 -4.91109 | opp_overlap 1932661 TTTTTACCATAAAAA GGGGCGAATCAGCA GTTAGTCCT TACTTTTTCGCCCC TCCTTTCTTTTGATG TERM 2376 1932723 - 1932735 + r 72 -4.9 -4.67552 | TGATGTTTACTTTTT GAAAT TAA ATTTC TTCTTTTTTGATGAA spr1951 1935387 - 1932727 - | hypothetical protein TERM 2377 1933859 - 1933877 + g 75 -9.6 -3.28712 | opp_overlap 1933870 CGGTGTTCTTGTTCT CCTTCCAG CAA TTGGAAGG TTGTCCAAGAAAGCG spr1952 1936767 - 1935463 - | hypothetical protein TERM 2378 1937045 - 1937060 + G 81 -5.4 -5.14965 | GCCCCAGACCAGTGA CCAGGA TGGA TCTTGG TTTTTTGATCCGCAT TERM 2379 1938095 - 1938081 - g 71 -7.1 -3.80551 | overlap 1938070 GAAACAGCCAGCAAA GCCGA CCCTC TCGGC ATCAATGGCCGCCAC spr1953 1936914 - 1938998 + | hypothetical protein TERM 2380 1939005 - 1939035 + T 100 -11.3 -4.4017 | opp_overlap 1939008, overlap 1939008 AATCACTAATAACCA AAAGAACCTTTGC ATCGC GCAAAGGTTCTTC TTTTATGAAACTTGG TERM 2381 1939008 - 1939032 + T 100 -13 -4.31397 | opp_overlap 1939008, overlap 1939005 CACTAATAACCAAAA GAACCTTTGC ATCGC GCAAAGGTTC TTCTTTTATGAAACT TERM 2382 1939032 - 1939008 - T 100 -13.7 -4.5774 | opp_overlap 1939008 1939005 CACTAATAACCAAAA GAACCTTTGCA TCG CGCAAAGGTTC TTCTTTTATGAAACT spr1954 1940789 - 1939038 - | hypothetical protein TERM 2383 1939131 - 1939147 + g 70 -2.9 -5.1287 | TCCTGCGAAATACAA GGTTGGT AGC GTCAGCC TTTTTTCAGTCTCAC TERM 2384 1939554 - 1939540 - G 70 -5.6 -4.3467 | ACTTGCACATGAAAA GCAGCG ATT CGTTGC CCTAGCTTCAAATCT TERM 2385 1940144 - 1940156 + g 80 -6.3 -4.67904 | opp_overlap 1940144 CCTGCAGGTCACGAA TGGTT TCA AACCA TTTTTCAAATTCATA TERM 2386 1940783 - 1940759 - G 70 -8.7 -3.28712 | opp_overlap 1940747, overlap 1940761 TTCTCTTGTTCACAA GATTATCCACA GGT TGTGGATAATA AACCATGATCTAACA TERM 2387 1940781 - 1940761 - G 82 -11.3 -3.21276 | overlap 1940759 CTCTTGTTCACAAGA TTATCCACA GGT TGTGGATAA TAAACCATGATCTAA TERM 2388 1941838 - 1941822 - g 71 -9.5 -2.78547 | overlap 1941825 TCACGGCATCAAGGA CAACCAA GAA TTGGTTG AAAAAACAATGGCTG arcA-truncation 1941478 - 1942221 + | arginine deiminase, truncation TERM 2389 1942259 - 1942213 - f 100 -24.2 -4.65895 | opp_overlap 1942213 GCTTCTATCGAAAAA CTTTCTTGAAGCCAACATCTTC AAG AAAAATGTTGGCTTCAAGAAAG TTTTGGCCTTTGAAT TERM 2390 1942213 - 1942259 + F 100 -21.3 -4.24404 | opp_overlap 1942213 GCTTCTATCGAAAAA CTTTCTTGAAGCCAACATCTT CAAGA AAAATGTTGGCTTCAAGAAAG TTTTGGCCTTTGAAT arcA-truncation 1942262 - 1942711 + | arginine deiminase, truncation arcB 1942769 - 1943785 + | ornithine carbamoyltransferase TERM 2391 1943818 - 1943851 + F 89 -9 -4.58424 | gap 1, opp_overlap 1943811 TCTACCAACAGCTAT GAGGGCTGCGACTAA TAGCT TTAGTC-CGGTCCTC TTTTATATAATGGTA arcC 1943950 - 1944897 + | carbamate kinase TERM 2392 1945154 - 1945127 - g 85 -5.6 -5.30575 | opp_overlap 1945127 1945125 1945128, overlap 1945128 GAAAAAGCTAAAAAA GGGTTTAAGATG CCTT CATCTTACACCG TATTATTGATAATCA TERM 2393 1945153 - 1945128 - g 76 -9.1 -3.75905 | opp_overlap 1945127 1945125 1945128, overlap 1945127 AAAAAGCTAAAAAAG GGTTTAAGATG CCTT CATCTTACACC GTATTATTGATAATC spr1959 1945106 - 1946617 + | hypothetical protein spr1960 1946639 - 1947970 + | hypothetical protein TERM 2394 1948058 - 1948014 - T 81 -10.9 -2.64199 | opp_overlap 1948016, overlap 1948013 GACCGATTAATGAAC TGCACCCCAAAAGTTAGAC AGAATAA ATCTAACTTTTGGGGTGTT TTATTATGAAATTGA TERM 2395 1948016 - 1948056 + T 100 -17.2 -4.78839 | opp_overlap 1948014 1948013 CCGATTAATGAACTG CACCCCAAAAGTTAGA CAGAATAAA TCTAACTTTTGGGGTG TTTTATTATGAAATT spr1961 1948665 - 1948375 - | hypothetical protein TERM 2396 1948840 - 1948820 - R 72 -2.5 -5.23943 | overlap 1948821 CAGCAAAAAAATAAA CTCGTTCCT AGC AAGACCGAA CAAGCTCCTATTGCA TERM 2397 1949098 - 1949081 - R 88 -7.7 -5.1167 | opp_overlap 1949081 AACGCAATACAAAAA GAGCCTG TTGC CAAGCTC TTTATACTCAATGAA TERM 2398 1949239 - 1949227 - R 71 -7.7 -3.58905 | AGGTTGCAGATAGAA CTGAC GAA GTCAG TAACATCTATACGGC TERM 2399 1949309 - 1949335 + r 79 -8 -4.04474 | TATTAGTCTATTATT TCTTCTCAGCGC GAA GGGCTGACAAGA TTTGTGTACGGATAT spr1962 1950203 - 1949304 - | hypothetical protein adh2 1951484 - 1950333 - | iron-containing alcohol dehydrogenase fucI 1953396 - 1951630 - | L-fucose isomerase spr1965 1956569 - 1953453 - | fucolectin-related protein TERM 2400 1954276 - 1954286 + g 70 -5.4 -4.35348 | GTAGCTACCTTATTT GTAG AGA CTAC TTTATCTTCTGTTAT spr1966 1958873 - 1956579 - | hypothetical protein TERM 2401 1957261 - 1957283 + g 72 -3.5 -5.0666 | TGGATTTGCCCATTA CTACCTA TTTTTGTTT TAGGTAG TTTCTTTTTTAACTC TERM 2402 1958552 - 1958518 - G 79 -9.4 -3.65529 | overlap 1958543 ATAGCTGTATCTAAA TCTAGCTCTCTTTCAT ACA ATGAAAGAGCACAAGA CTGAATATCTATATG TERM 2403 1958922 - 1958894 - R 100 -13.3 -4.07687 | opp_overlap 1958885 1958892 ACCTCTCTTCCAAAA TGGAGGTGATATC CCA AATACCACCTCCA CACTTTCTACTACTT PTS-EII 1959732 - 1958932 - | PTS system, IID component PTS-EII 1960502 - 1959729 - | PTS system, IIC component TERM 2404 1960371 - 1960361 - G 71 -6.8 -4.0342 | CTGAACCAATAAGAA CACC TTG GGTG AAATCTCCTAAGACT PTS-EII 1960997 - 1960527 - | PTS system, IIB component PTS-EII 1961434 - 1960988 - | PTS system, IIA component fucU 1961852 - 1961412 - | fucose pathway protein, function unknown fucA 1962517 - 1961864 - | L-fuculose phosphate aldolase fcsK 1964065 - 1962617 - | fucose kinase TERM 2405 1964293 - 1964265 - g 71 -6.8 -4.10007 | gap 1, overlap 1964267 AGAATTGCCGTAAAA GAGCTGGCAGAAA TCAC TTTCT-CCAGCAC AAGTACCTTACGTCG TERM 2406 1964291 - 1964267 - g 70 -8 -3.64488 | gap 1, overlap 1964265 AATTGCCGTAAAAGA GCTGGCAGAAA TCAC TTTCT-CCAGC ACAAGTACCTTACGT TERM 2407 1964448 - 1964434 - g 79 -5 -5.1101 | opp_overlap 1964446 GTACTAGGCAAAAAA GACTAA TCG CTAGTC TCGCTAAAGACTTTA fcsR 1964196 - 1964969 + | fucose operon repressor, putative TERM 2408 1965212 - 1965267 + T 93 -10 -4.13343 | opp_overlap 1965216 1965221, overlap 1965213 1965221 GGAGTAAACCTTCCC ACAATAAAACGCATAGTATCAAGTTT TTGC ACACCTGATATTATGCGTTTTTTTGA TTTTAAAGACTTTGT TERM 2409 1965213 - 1965266 + T 90 -13.5 -3.07283 | opp_overlap 1965216 1965221, overlap 1965212 1965221 GAGTAAACCTTCCCA CAATAAAACGCATAGTATCAAGTTT TTGC ACACCTGATATTATGCGTTTTTTTG ATTTTAAAGACTTTG TERM 2410 1965263 - 1965216 - T 77 -9.4 -3.30635 | opp_overlap 1965213 1965212 1965221, overlap 1965221 TAAACCTTCCCACAA TAAAACGCATAGTATCAAGTTT TTGC ACACCTGATATTATGCGTTTTT TTGATTTTAAAGACT TERM 2411 1965221 - 1965258 + T 100 -9.3 -5.79588 | opp_overlap 1965216 1965221, overlap 1965213 1965212 CTTCCCACAATAAAA CGCATAGTATCAAGTTT TTGC ACACCTGATATTATGCG TTTTTTTGATTTTAA TERM 2412 1965258 - 1965221 - T 100 -9.3 -4.77165 | opp_overlap 1965221 1965213 1965212, overlap 1965216 CTTCCCACAATAAAA CGCATAGTATCAAGTTT TTGC ACACCTGATATTATGCG TTTTTTTGATTTTAA TERM 2413 1965556 - 1965583 + T 93 -10.7 -3.98159 | opp_overlap 1965556 AGATACGTCAAAAAA GCCCTTAACTA CGGCCA TAGTTAGGGGC TTTGGTGTTCTAATG TERM 2414 1965583 - 1965556 - T 100 -9.2 -5.08169 | opp_overlap 1965556 AGATACGTCAAAAAA GCCCTTAACTAC GGCC ATAGTTAGGGGC TTTGGTGTTCTAATG TERM 2415 1965675 - 1965689 + T 70 -3.6 -4.92783 | TTGATGATCTAAATT TAGTGT GGT ATACTA TTTTTGTCATCGGTT TERM 2416 1965926 - 1965899 - T 95 -8.5 -5.08169 | opp_overlap 1965899 AGATACGTCAAAAAA GCCCTTAACTA TGGCAC TAGTTAGGGGC TTTGGTGTTCTAATG TERM 2417 1965899 - 1965926 + T 93 -10.7 -3.98159 | opp_overlap 1965899 AGATACGTCAAAAAA GCCCTTAACTA TGGCAC TAGTTAGGGGC TTTGGTGTTCTAATG TERM 2418 1966090 - 1966065 - T 100 -10.5 -5.1861 | opp_overlap 1966065 1966066, overlap 1966066 TCTAGTATCAAAAAA CCGACTAGCTC TTAT GAACTAGTCGA TTTCTCATCAATGCG TERM 2419 1966089 - 1966066 - T 91 -11.8 -3.70443 | opp_overlap 1966065 1966066, overlap 1966065 CTAGTATCAAAAAAC CGACTAGCTC TTAT GAACTAGTCG ATTTCTCATCAATGC TERM 2420 1966066 - 1966089 + T 77 -9.6 -2.98447 | opp_overlap 1966066 1966065, overlap 1966065 CTAGTATCAAAAAAC CGACTAGCTC TTAT GAACTAGTCG ATTTCTCATCAATGC adcA 1967603 - 1966098 - | zinc ABC transporter zinc-binding protein TERM 2421 1967332 - 1967343 + g 72 -4.4 -4.70319 | AGCAATTTAGGTACC CATG TTTC CATG TTTTCATTTTCATAA adcB 1968449 - 1967613 - | zinc ABC transporter permease TERM 2422 1967753 - 1967739 - GR 77 -6.4 -4.60487 | overlap 1967744 TACCATTCCCAAAAA GCCAAT CGC ACTGGC AAGCAGCATAACCGA adcC 1969116 - 1968412 - | ABC transporter ATPase adcR 1969616 - 1969116 - | adc operon repressor AdcR TERM 2423 1969436 - 1969419 - G 70 -8.5 -3.29263 | AGATTCCTCTGACAA GAGCATA AGGA TATGCTC CTGAGTATTGGTCAG dltD 1970994 - 1969711 - | D-alanine transfer from undecaprenol-phosphate to the poly(glycerophosphate) chain dltC 1971211 - 1970972 - | D-alanine--poly(phosphoribitol) ligase subunit 2 dltB 1972469 - 1971225 - | D-alanine transfer from Dcp to undecaprenol-phosphate TERM 2424 1971335 - 1971353 + g 83 -5.2 -5.1848 | overlap 1971332 TCCAGCGATTCTCAG GTAGGGCA GCC TTCCCTGC TTTTTTCCGTTCCTT TERM 2425 1971361 - 1971376 + g 85 -2.5 -5.7946 | TTCCCTGCTTTTTTC CGTTC CTTATT GAGCG TTTTTTTCTTGCGAA TERM 2426 1971963 - 1971951 - G 70 -7.7 -3.75015 | opp_overlap 1971951, overlap 1971960 ATAATTTTCATTAAA TCGCT TAA AGCGA TCGATTGGACCACTC dltA 1973932 - 1972466 - | D-alanine--D-alanyl carrier protein ligase TERM 2427 1974446 - 1974408 - R 83 -7.6 -4.77165 | CTTCCCATAATAAAA CACACAATATCAAGTTTT TTC AACACCTGATACTATGCG CTTTTCTGATTTTTA spr1983 1975660 - 1974482 - | hypothetical protein TERM 2428 1974550 - 1974538 - G 75 -7.7 -4.10164 | CTATCATCAGACAAA TGGCT GAT AGCCA AAAACTGATGCTAAT TERM 2429 1975623 - 1975603 - G 70 -3.3 -4.88918 | TTACTCTAAAGAAAA TATCTGCTA AAT TTGCAAATA ATTGAGAGACTAACA TERM 2430 1975926 - 1975909 - R 77 -4.9 -5.1286 | gap 1 TAAAAATCAGAAAAA CGCTCAAA TCC TTTG-GCG CTCTAAGCTTTTCTA transposase_H 1977108 - 1976116 - | hypothetical protein TERM 2431 1976166 - 1976190 + g 70 -5.6 -4.34402 | opp_overlap 1976166 1976161 AATCCAAACACGAAA CCAGTCCACG TTTTT CCAGGACTGG TTTTGATATAGCACG transposase_H 1977393 - 1977112 - | hypothetical protein TERM 2432 1977588 - 1977557 - H 79 -10.3 -2.91264 | opp_overlap 1977558 1977564, overlap 1977564 CTTTCTAGCGACAGA CCTCAAACAGTCT CTCCCC AGACTGTTTGAGT ATTCACCCCTTCGCT TERM 2433 1977558 - 1977587 + H 90 -13.8 -3.04322 | opp_overlap 1977557 1977564, overlap 1977564 TTTCTAGCGACAGAC CTCAAACAGTCT CTCCCC AGACTGTTTGAG TATTCACCCCTTCGC TERM 2434 1978103 - 1978086 - H 100 -9.9 -5.67063 | opp_overlap 1978086 CGTACTACAAAAAAA CGACGAT TTAA ATCGTCG TTTTGCTAAGATAAA TERM 2435 1978086 - 1978103 + H 93 -9.9 -4.26903 | opp_overlap 1978086 CGTACTACAAAAAAA CGACGAT TTAA ATCGTCG TTTTGCTAAGATAAA spr1986 1978504 - 1979091 + | hypothetical protein TERM 2436 1979088 - 1979135 + T 100 -21.8 -3.40371 | opp_overlap 1979094 1979100, overlap 1979094 1979100 AACCTACGTGAATTT CTAAAATATAAACCCTGCCT AGATATAA AGGCAGGGTTTATATTTTAG TTAATTGCTCAAGTA TERM 2437 1979094 - 1979129 + T 100 -15 -4.50193 | opp_overlap 1979094 1979100, overlap 1979088 1979100 CGTGAATTTCTAAAA TATAAACCCTGCCT AGATATAA AGGCAGGGTTTATA TTTTAGTTAATTGCT TERM 2438 1979129 - 1979094 - T 100 -15 -4.14392 | opp_overlap 1979094 1979088 1979100, overlap 1979100 CGTGAATTTCTAAAA TATAAACCCTGCCT AGATATAA AGGCAGGGTTTATA TTTTAGTTAATTGCT TERM 2439 1979100 - 1979123 + T 100 -9.6 -4.50859 | opp_overlap 1979094 1979100, overlap 1979094 1979088 TTTCTAAAATATAAA CCCTGCCT AGATATAA AGGCAGGG TTTATATTTTAGTTA TERM 2440 1979123 - 1979100 - T 100 -9.6 -4.45168 | opp_overlap 1979100 1979094 1979088, overlap 1979094 TTTCTAAAATATAAA CCCTGCCT AGATATAA AGGCAGGG TTTATATTTTAGTTA spr1987 1979381 - 1979178 - | hypothetical protein TERM 2441 1979544 - 1979529 - R 77 -9 -3.53224 | CATTTTTTGCTGAAA TTGGGC TCTT GCCCAA GCTCTATCAACATAA glpF 1980276 - 1979572 - | glycerol uptake facilitator protein TERM 2442 1979946 - 1979958 + g 70 -7.7 -3.75153 | CTGCATTTTCTTCTG CCTCA TAG TGAGG TTTGAATTGCAACCA glpD-truncation 1980843 - 1980346 - | glycerol-3-phosphate dehydrogenase, truncation glpD-truncation 1982174 - 1980789 - | glycerol-3-phosphate dehydrogenase, truncation TERM 2443 1982120 - 1982131 + gr 80 -2.2 -5.63103 | overlap 1982115 TCAAGAGGTCCAGGG TGCG TTCC TGCA TTTTTTTAATTGACA glpK 1983724 - 1982216 - | glycerol kinase TERM 2444 1983880 - 1983862 - R 79 -4.5 -5.27923 | GAATTTCACAAAAAA GACCTGG ATTAA CCAAGCC TTTTAAGTGAATAAT spr1992 1985310 - 1983883 - | hypothetical protein hslO 1985475 - 1986347 + | Hsp33-like chaperonin spr1994 1986304 - 1987314 + | hypothetical protein TERM 2445 1987379 - 1987428 + T 84 -5.9 -5.21709 | opp_overlap 1987382, overlap 1987382 CTTTCCTCATCAAAA AAACTCCGTAGTCTCTAGC GCTATAAATCCG GCTAGAGATTACAGAGTTA TTTTTTAATCTAAAC TERM 2446 1987382 - 1987425 + T 83 -7.6 -4.69962 | opp_overlap 1987382, overlap 1987379 TCCTCATCAAAAAAA CTCCGTAGTCTCTAGC GCTATAAATCCG GCTAGAGATTACAGAG TTATTTTTTAATCTA TERM 2447 1987425 - 1987382 - T 93 -7.6 -5.52384 | opp_overlap 1987379 1987382 TCCTCATCAAAAAAA CTCCGTAGTCTCTAGC GCTATAAATCCG GCTAGAGATTACAGAG TTATTTTTTAATCTA pspC 1989649 - 1987544 - | choline binding protein A TERM 2448 1988554 - 1988566 + g 72 -9.1 -3.41234 | CTTGCTTAATTTTTT CCTCG TCT CGAGG TTCCTTAGCTTCCTC spr1996 1990255 - 1989728 - | hypothetical protein hk06 1991669 - 1990338 - | histidine kinase rr06 1992319 - 1991666 - | response regulator clpC-truncation 1993104 - 1992961 - | class III stress response-related ATPase, truncation clpC-truncation 1995393 - 1993105 - | ATP-dependent Clp protease, ATP-binding subunit ctsR 1995916 - 1995395 - | transcriptional regulator CtsR TERM 2449 1995929 - 1995966 + r 71 -3.3 -5.02439 | opp_overlap 1995931, overlap 1995931 CATTTTTAAAAGAAA AAGGGCGCTGGTAAAGG ATAA TCTTCACCAACTCCCTA TTTTTCTACTTATCT TERM 2450 1995964 - 1995931 - R 100 -9.6 -5.45802 | opp_overlap 1995929 1995931 TTTTTAAAAGAAAAA GGGCGCTGGTAAAG GATAAT CTTCACCAACTCCC TATTTTTCTACTTAT ABC-NBD 1996700 - 1995972 - | ABC transporter ATP-binding protein spr2003 1997707 - 1996700 - | ABC transporter substrate-binding protein TERM 2451 1996861 - 1996876 + g 71 -4 -4.90013 | gap 1, overlap 1996864 AGTATTTTTGAGATT CGATGAC AAA GTCA-CG TTTTTCCTTGAGTTC ABC-MSP 1998506 - 1997745 - | ABC transporter permease spr2005 1998756 - 1998466 - | hypothetical protein TERM 2452 1998820 - 1998799 - R 100 -7.3 -5.94743 | opp_overlap 1998773 TAAAAAAAAGAAAAA CCTTTACCA TACA TGGAAAAGG TGCAAAATTAGACTA TERM 2453 1999004 - 1998983 - R 80 -7.3 -4.52857 | ACTGCTTACAGAAAA GAGCAGGAA ATTT CTCCTACTC CAATTTTCTATACTC cbpD 2000358 - 1999012 - | choline binding protein D TERM 2454 2000331 - 2000288 - G 78 -4.1 -5.1861 | gap 1, opp_overlap 2000314 CCTACTACTAAAAAA GGAACAAGCTTTTTAACTGA CATCT TCAAGTAATAA-CTTGTTCC TCTTGCTATAAACGG TERM 2455 2000445 - 2000429 - R 100 -9.5 -5.8096 | opp_overlap 2000429 GAGAAAAAAGAAAAA GTGAGAA AAT TTCTCAC TTTAGTCAAGATAAT TERM 2456 2000429 - 2000445 + r 81 -9.5 -3.73953 | opp_overlap 2000429 GAGAAAAAAGAAAAA GTGAGAA AAT TTCTCAC TTTAGTCAAGATAAT spr2007 2000713 - 2000447 - | hypothetical protein dnaC 2002067 - 2000715 - | replicative DNA helicase rplI 2002563 - 2002111 - | 50S ribosomal protein L9 spr2010 2004533 - 2002560 - | DHH subfamily 1 protein TERM 2457 2002678 - 2002668 - G 71 -6.8 -4.05788 | TGCTGCCAAATTAAA GTGG CCT CCAC CGCCTAACTCTTCCA TERM 2458 2004652 - 2004626 - R 79 -4.6 -5.24416 | gap 1, opp_overlap 2004626 CAATTATAAGAAAAA GGTAG-TTTAC AATTCA GTAAACCTACC TTTACACATATTGAA spr2011 2005217 - 2004669 - | ribosomal subunit interface protein comFC 2005959 - 2005297 - | competence protein ComF, putative comFA 2007254 - 2005956 - | helicase, putative TERM 2459 2006776 - 2006764 - G 72 -3.3 -5.06816 | overlap 2006765 ATTCCGCAAGAAAAA TCCTG TTG CAGGC GCTTGTACAGCTCCA spr2014 2007310 - 2007945 + | hypothetical protein TERM 2460 2008170 - 2008136 - f 100 -20.4 -2.80816 | opp_overlap 2008136 2008144, overlap 2008138 2008140 2008144 CTTTGATCTATGATA TATAGAAATCCTATCG CTT CGATAGGATTTCTATA TTTTACAAATGGTAT TERM 2461 2008136 - 2008170 + F 100 -20.4 -4.12456 | opp_overlap 2008136 2008138 2008140 2008144, overlap 2008144 CTTTGATCTATGATA TATAGAAATCCTATCG CTT CGATAGGATTTCTATA TTTTACAAATGGTAT TERM 2462 2008168 - 2008138 - f 100 -18.6 -2.95298 | opp_overlap 2008136 2008144, overlap 2008136 2008140 2008144 TTGATCTATGATATA TAGAAATCCTATCG CTT CGATAGGATTTCTA TATTTTACAAATGGT TERM 2463 2008166 - 2008140 - f 100 -16.8 -3.02947 | opp_overlap 2008136 2008144, overlap 2008138 2008136 2008144 GATCTATGATATATA GAAATCCTATCG CTT CGATAGGATTTC TATATTTTACAAATG TERM 2464 2008162 - 2008144 - f 100 -11.8 -4.18367 | opp_overlap 2008136 2008144, overlap 2008140 2008138 2008136 TATGATATATAGAAA TCCTATCG CTT CGATAGGA TTTCTATATTTTACA TERM 2465 2008144 - 2008162 + F 100 -11.8 -4.33956 | opp_overlap 2008144 2008140 2008138 2008136, overlap 2008136 TATGATATATAGAAA TCCTATCG CTT CGATAGGA TTTCTATATTTTACA cycK 2008230 - 2009150 + | cysteine synthase, O-acetylserine sulfhydrylase TERM 2466 2009220 - 2009179 - T 100 -11.9 -4.67011 | gap 1, opp_overlap 2009179 AAGTCTATTGAAAAA TCTCCAGACTAGAGAACT CACGGAT AGTTC-CTAATCTGGAGA TTTCTTATTTGCACT TERM 2467 2009179 - 2009220 + T 100 -9.7 -4.57581 | gap 1, opp_overlap 2009179 AAGTCTATTGAAAAA TCTCCAGACTAGAGAACT CACGGAT AGTTC-CTAATCTGGAGA TTTCTTATTTGCACT transposase_G 2009616 - 2009347 - | hypothetical protein transposase_D 2009766 - 2009945 + | degenerate transposase TERM 2468 2010053 - 2010020 - T 84 -8.3 -4.63928 | opp_overlap 2010024, overlap 2010024 AGATGAGTGTAAAAA GAAAGTCCTCATTTC AATA GAAATCACGACTTTC TGATGGATTTATAGT transposase_E 2010488 - 2010201 - | degenerate transposase TERM 2469 2010614 - 2010629 + r 86 -6.1 -5.54338 | TCCTAAATGCACTTA GCCCT TATTAT AGGGC TTTTTGTTTTAATTA TERM 2470 2010724 - 2010708 - R 100 -10.9 -5.36441 | opp_overlap 2010708 GCCCTATACAAAAAA GGAAGCA AAT TGCTTCC TTTCTATTATTAGTT TERM 2471 2010708 - 2010724 + r 100 -10.9 -4.36774 | opp_overlap 2010708 GCCCTATACAAAAAA GGAAGCA AAT TGCTTCC TTTCTATTATTAGTT tsf 2011774 - 2010734 - | elongation factor Ts TERM 2472 2010963 - 2010984 + g 87 -5.1 -5.42265 | overlap 2010964 2010980 AAGCGGTCCATTTTA CCTGGGATA ATTT TGTCCCAGA TTTTTTCTGGTTTGC TERM 2473 2010964 - 2010983 + g 77 -8.6 -3.83732 | overlap 2010963 2010980 AGCGGTCCATTTTAC CTGGGATA ATTT TGTCCCAG ATTTTTTCTGGTTTG TERM 2474 2011831 - 2011801 - R 100 -17.6 -4.09243 | opp_overlap 2011799 2011796 TATATTTTTTGAAAA TAGGAGAGCCGGGC TAA GCCCCGCCCTCCTA GGTAATTACTATTTG rpsB 2012619 - 2011840 - | 30S ribosomal protein S2 TERM 2475 2012073 - 2012085 + g 76 -3.3 -5.23016 | opp_overlap 2012073 2012074, overlap 2012074 CAACCATCGCTACAA CTGGG ATT CCCAA TTTTTTAGCTTCTTT TERM 2476 2012211 - 2012223 + g 71 -6.3 -4.15044 | CACGTTGTTTGTTAA GAAGT GCA ACTTC TTTCTTAGGAAGAAC TERM 2477 2012378 - 2012394 + g 71 -6.5 -4.24413 | opp_overlap 2012367 CGTACTGCTTCTTCA GCAACTG CAT CAGCTGC TTGTTTCTTAGTACC TERM 2478 2012836 - 2012815 - R 74 -6.6 -4.28049 | gap 1, opp_overlap 2012813 2012817 GGTAAAACCTGAAAA GAGGG-CTC TATTC GAGTCCCTC TGTAAATTAATCTGC gsp-781 2014021 - 2012843 - | general stress protein GSP-781 TERM 2479 2013327 - 2013358 + g 74 -5 -4.82667 | gap 1, opp_overlap 2013312 GCTGCTTCTGCTACC GCAGCTGCACGAGCC TCT GCCTCA-GCTGCTGC TTTTTGCTCTAATAG TERM 2480 2014091 - 2014072 - R 86 -5 -5.59357 | opp_overlap 2014072 AGTATACCAAAAAAA GGCCTAAT AAAT ATTACGCC TTTGTTACATTTATA mreD 2014609 - 2014115 - | rod shpae-determining protein MreD, putative mreC 2015427 - 2014609 - | rod shape-determining protein MreC TERM 2481 2014937 - 2014953 + g 71 -6.6 -4.08767 | opp_overlap 2014937 AGAAGGTTGACTATA GTAGAG TTCTC CTCTAC TTTTGAAACACTCCC TERM 2482 2015452 - 2015462 + r 70 -4 -4.92314 | opp_overlap 2015452 TTTATATCAAAAACT GTTA CAG TAAC TTTTTATCAATTCCT ABC-MSP 2016280 - 2015486 - | ABC transporter membrane-spanning permease - unknown substrate TERM 2483 2016023 - 2016007 - G 71 -3.7 -4.97824 | overlap 2016009 AAAACTCAAATAAAA CATTCCC ATT AGAAATG AAAAATAGTTGAAAA ABC-NBP 2017112 - 2016273 - | cobalt transporter ATP-binding subunit stpA 2017924 - 2017097 - | cobalt transporter ATP-binding subunit pgsA 2018466 - 2017921 - | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase spr2028 2019307 - 2018477 - | hypothetical protein spr2029 2020623 - 2019340 - | hypothetical protein TERM 2484 2019881 - 2019907 + g 74 -5.2 -4.71186 | ATTCTCATACTATCT GTTGGCTTTACA GGC TGTAAAAACAAC TTTTCTCTTGCTACT TERM 2485 2019933 - 2019945 + g 71 -6.3 -4.15396 | opp_overlap 2019933 2019932 CTACTTCCTGAAAAT CTGAA TCT TTCAG TTCTTTGCTTTCAAA spr2030 2021870 - 2020620 - | hypothetical protein TERM 2486 2020976 - 2020963 - G 71 -5.3 -4.5123 | AATCCACTAAATAAA TCAAG CTCA CTTGA AATGGTATAAGCTAA TERM 2487 2021319 - 2021304 - G 77 -6.2 -4.58663 | ATCATTGGCTAAAAA TTCTTG GAAA CAAGAA TAAGAACTTTGTGGA TERM 2488 2021811 - 2021823 + g 75 -2.7 -5.28481 | ACGCACGGTAATTTT GTTTG TTT TAAAC TTTTTTGATTGGATA spr2031 2022029 - 2022397 + | hypothetical protein recF 2022400 - 2023497 + | recombination protein F TERM 2489 2023501 - 2023543 + T 100 -10.1 -5.09225 | gap 1, opp_overlap 2023501 2023504 2023511 2023514, overlap 2023504 AATGGAAATTGACAA CATTGTAAAAGAACTCCTGT TTTC ACTGGAGTTCTTTT-CATTG TTTTTTACATAGAAT TERM 2490 2023543 - 2023501 - T 81 -10.1 -3.48465 | gap 1, opp_overlap 2023501 2023504, overlap 2023504 2023511 2023514 AATGGAAATTGACAA CATTGTAAAAGAACTCCTGT TTTC ACTGGAGTTCTTTT-CATTG TTTTTTACATAGAAT TERM 2491 2023540 - 2023504 - T 77 -10.4 -2.57996 | gap 1, opp_overlap 2023501 2023504, overlap 2023501 2023511 2023514 GGAAATTGACAACAT TGTAAAAGAACTCCTGT TTTC ACTGGAGTTCTTTT-CA TTGTTTTTTACATAG TERM 2492 2023504 - 2023540 + T 100 -10.4 -4.64763 | gap 1, opp_overlap 2023504 2023501 2023511 2023514, overlap 2023501 GGAAATTGACAACAT TGTAAAAGAACTCCTGT TTTC ACTGGAGTTCTTTT-CA TTGTTTTTTACATAG TERM 2493 2023534 - 2023511 - T 93 -9.6 -4.20712 | opp_overlap 2023504 2023501, overlap 2023504 2023501 2023514 GACAACATTGTAAAA GAACTCCTGT TTTC ACTGGAGTTC TTTTCATTGTTTTTT imdH 2025026 - 2023548 - | inositol-5-monophosphate dehydrogenase TERM 2494 2024600 - 2024590 - G 70 -3.2 -4.90525 | TAATCTGAAATAAAA CGAA GAT CTCG GTTTGTCAAAATACC TERM 2495 2025160 - 2025132 - R 86 -4.7 -5.63517 | opp_overlap 2025132 GGGGTAAATAAAAAA CTATCTTTTCT TCGAGAT AGAAATGATAG TTTCTTGTAAAATAA trpS 2026203 - 2025178 - | tryptophanyl-tRNA synthetase II ABC-NBD 2026409 - 2028031 + | ABC transporter ATP-binding protein TERM 2496 2028076 - 2028038 - f 81 -6.1 -5.00923 | opp_overlap 2028041 2028046, overlap 2028046 AAAGACTAAATAAAA CTTCAAAACTCAGTTGG GTTAA CCAACTGAGTTTTCTAT CATTCTACGAGGTAA TERM 2497 2028041 - 2028073 + F 85 -12.2 -2.96274 | opp_overlap 2028038 2028046, overlap 2028046 GACTAAATAAAACTT CAAAACTCAGTTGG GTTAA CCAACTGAGTTTTC TATCATTCTACGAGG TERM 2498 2028068 - 2028046 - f 100 -12.1 -4.30559 | opp_overlap 2028041 2028046, overlap 2028038 AATAAAACTTCAAAA CTCAGTTGG GTTAA CCAACTGAG TTTTCTATCATTCTA TERM 2499 2028046 - 2028068 + F 100 -12.1 -4.63007 | opp_overlap 2028046 2028038, overlap 2028041 AATAAAACTTCAAAA CTCAGTTGG GTTAA CCAACTGAG TTTTCTATCATTCTA spr2036 2028093 - 2030645 + | ABC transporter permease TERM 2500 2030669 - 2030650 - T 82 -5.7 -5.31456 | opp_overlap 2030643 2030650 CTAAGGCATAAAAAA TCGACCA GTTAAT CGGTCGA TTTTTTTAATCTTCT TERM 2501 2030650 - 2030669 + T 86 -5 -5.6473 | opp_overlap 2030650, overlap 2030643 CTAAGGCATAAAAAA TCGACC AGTTAATC GGTCGA TTTTTTTAATCTTCT spr2037 2031060 - 2030746 - | hypothetical protein spr2038 2031426 - 2031088 - | hypothetical protein spr2039 2032278 - 2031511 - | hypothetical protein TERM 2502 2031589 - 2031601 + g 85 -4.1 -5.54192 | opp_overlap 2031584, overlap 2031584 TTTATCCAAACTACC TGTCA AGG TGGCA TTTTTTTCACTTAGT TERM 2503 2032115 - 2032125 + g 70 -5.4 -4.43012 | TTTTCTTTTAAATTG GACA CCA TGTC TTTTCCTATTGCCAT TERM 2504 2032424 - 2032413 - H 77 -3 -5.5208 | opp_overlap 2032420, overlap 2032406 TTACAAGATAAAAAA TCTA TTTT TAGA CATATAGTCTAATTT TERM 2505 2032591 - 2032571 - g 74 -4.7 -4.95806 | opp_overlap 2032571 AAATTAGTAGAAAAA GCCGGAA TTAGTCG TTCCAGC TTCTATACTCACTAT spr2040 2032457 - 2032999 + | hypothetical protein TERM 2506 2033028 - 2033008 - T 81 -6.2 -5.01546 | gap 1, opp_overlap 2033009 2033010, overlap 2033010 AAATTGATACAAAAA GAGGAACAC AGCT GTGTTCC-C TTTTATCTATACTCC TERM 2507 2033009 - 2033028 + T 76 -6.4 -4.62984 | opp_overlap 2033008 2033010, overlap 2033010 AATTGATACAAAAAG AGGAACAC AGCT GTGTTCCC TTTTATCTATACTCC TERM 2508 2033027 - 2033010 - T 93 -9.9 -4.11744 | opp_overlap 2033009 2033010, overlap 2033008 ATTGATACAAAAAGA GGAACAC AGCT GTGTTCC CTTTTATCTATACTC TERM 2509 2033010 - 2033027 + T 81 -9.9 -3.37067 | opp_overlap 2033010 2033008, overlap 2033009 ATTGATACAAAAAGA GGAACAC AGCT GTGTTCC CTTTTATCTATACTC comE 2033994 - 2033242 - | response regulator TERM 2510 2033319 - 2033338 + g 72 -3.6 -5.10497 | opp_overlap 2033312, overlap 2033321 GACAACGATGGTCTT CATAGAAA ACAA TTTCTAAG TTTTTTCGATCAATT comD 2035316 - 2033991 - | putative sensor histidine kinase ComD comC 2035462 - 2035337 - | competence stimulating peptide precursor (csp) TERM 2511 2035613 - 2035596 - R 100 -9.1 -5.4505 | opp_overlap 2035596 TTTTTTAAGAAAAAA GCCGGGA AAAT TCCCAGC TTTGCTATTATATTG TERM 2512 2035596 - 2035613 + r 73 -6.9 -4.00882 | opp_overlap 2035596 TTTTTTAAGAAAAAA GCCGGGA AAAT TCCCAGC TTTGCTATTATATTG spr2044 2036223 - 2035744 - | SPOUT methyltransferase superfamily protein TERM 2513 2036437 - 2036422 - g 74 -4.8 -4.77986 | opp_overlap 2036422 TGAAACATCTAAAAA CATTTT ACAA AAAATG GTTTCAATTATTAGT sphtra 2036394 - 2037587 + | serine protease TERM 2514 2037721 - 2037689 - g 88 -4.2 -5.77988 | AGATATACAAAAAAA TCCCTATCAACCCC GAAAA GAATTTGATAGAGA AAAACTAGATGAACT TERM 2515 2037738 - 2037726 - g 72 -3.4 -5.03994 | TTTGATAGAGAAAAA CTAG ATGAA CTAG CACAGTCTATCAAAG spo0J 2037645 - 2038403 + | chromosome segregation protein