TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.606858 %AT, 1509258 nt, 10228 terms. Intergenic: 0.650083 %AT, H2T: 258043 nt, 2020 terms; T2T: 63731 nt, 1282 terms; H2H: 53923 nt, 859 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|15674250|ref|NC_002737.1| Streptococcus pyogenes M1 GAS, complete genome (length 1852441) TERM 1 1362 - 1342 - g 73 -6.9 -4.14392 | GCGCAAGTTGGAAAA TTTTACGGT GTT ACCGTCAAA GAAATTAAAGCTACT dnaA 232 - 1587 + | chromosomal replication initiation protein TERM 2 1877 - 1848 - g 70 -2.9 -5.1356 | opp_overlap 1836 1853, overlap 1850 TTTCATCAATAAAAA TTGAAGTCACTTC TACA GGAGTAACTTTAA CAGGGTCTAACGGTC TERM 3 2180 - 2190 + G 71 -6.8 -4.0896 | TTGAAGTCTATTATT GCTG AAA CAGC TTTTGCAGCCAGTTT dnaN 1742 - 2878 + | DNA polymerase III subunit beta TERM 4 2890 - 2903 + F 93 -3.8 -5.97979 | opp_overlap 2890 CTAAGTAAGAAAAAG CTCC CTTTTA GGAG TTTTTTTGTTATTAT SPy_0004 2953 - 3150 + | hypothetical protein SPy_0006 3480 - 4595 + | translation-associated GTPase TERM 5 5154 - 5180 + G 90 -8.8 -4.86731 | GCTATTTCGTTAACT CTTGACAGAGTT GTC AATGCTGTCAAG TTTTATTTACAAGAA pth 4665 - 5234 + | peptidyl-tRNA hydrolase TERM 6 6229 - 6215 - g 70 -8.6 -3.29626 | GAAGATTTACAGCAA GGAAAG GCT CTTTCC AATCTTAACTACTTT TERM 7 7292 - 7273 - g 70 -5.8 -4.32034 | overlap 7274 GCAGCATTATGAAAA CTTCAAAG CACG CTTTGAAA ATTACCCTGTTGAGG TERM 8 7532 - 7509 - g 70 -3.2 -4.95957 | overlap 7510 TAAAGGAATTAAAAA CTAAGGTTGA CGTC TTAACCTTAA CAGCTACTCCGATTC TERM 9 7890 - 7914 + G 72 -4.3 -4.67607 | opp_overlap 7892, overlap 7892 CAATCATCGAAACAG GAGTTGACATT TCT AATGTAAACAC TTTGTTTATTGAGAA trcF 5237 - 8740 + | putative transcription-repair coupling factor SPy_0009 8879 - 9175 + | hypothetical protein TERM 10 9358 - 9332 - g 76 -11.1 -2.74605 | opp_overlap 9330 TCTTGTCAAAAGTTA TGTTGATTTTG AAAAG CAAAATCAACA GGTGGTTAAATTAAA divIC 9162 - 9533 + | putative cell division protein (DivIC) TERM 11 10158 - 10133 - g 79 -6.9 -4.57569 | TTATTTGCTCAAAAA GTTCATGCCAC TCAA ATGGCACAAAC AAACCATGGAACTTA SPy_0012 9668 - 10954 + | hypothetical protein TERM 12 11002 - 10989 - g 88 -3.9 -5.72053 | TAATGAAATAAAAAA TAAAG CCTA CTTTA AAAATCATAGACATG TERM 13 11036 - 11064 + G 82 -6.1 -4.92363 | TAATAGCCGTATCTG GTGGAGTAGATTC AAT GAATTTATTGCAC TTTTTATACCTGTTT SPy_0013 10951 - 12237 + | putative cell-cycle protein TERM 14 13955 - 13925 - g 77 -4.8 -4.87389 | CATGCTAAAAATAAA CCACTTGCAAATGA CGT TAATTTGAAAGTAG TAGCCCAACAGACTC ftsH 12806 - 14785 + | putative cell division protein TERM 15 14832 - 14783 - f 93 -13.4 -3.33261 | gap 1, opp_overlap 14795, overlap 14795 TCTGAATCTGCAGAA TGAT-ATAAAAAAGCTGAACTTA TAGAT TAAGTTCAGCTTTTTTATCAACA CAATATCCTTGTAAA TERM 16 14819 - 14795 - f 100 -11.6 -5.42131 | opp_overlap 14795, overlap 14783 GAATGATATAAAAAA GCTGAACTTA TAGAT TAAGTTCAGC TTTTTTATCAACACA TERM 17 14795 - 14819 + F 100 -11.6 -5.24129 | opp_overlap 14783 14795 GAATGATATAAAAAA GCTGAACTTA TAGAT TAAGTTCAGC TTTTTTATCAACACA SPy_0016 15110 - 16501 + | putative amino acid permease TERM 18 17041 - 17027 - f 93 -8.6 -4.65032 | GAAACGAGAAATAAA TCTGTC AGC GACAGA AGGAACGAGTAAGTT TERM 19 19304 - 19325 + F 75 -10.1 -2.58544 | opp_overlap 19305, overlap 19303 ACGGCAGGAGGGCAA ACCGAGGAG TTTA CTCCTCGGG GTTGTAGGACTGCGA TERM 20 19324 - 19305 - f 100 -13.6 -3.62096 | opp_overlap 19304 19303 CGGCAGGAGGGCAAA CCGAGGAG TTTA CTCCTCGG GGTTGTAGGACTGCG TERM 21 23042 - 23028 - f 93 -8.6 -4.65032 | GAAACGAGAAATAAA TCTGTC AGC GACAGA AGGAACGAGTAAGTT TERM 22 25305 - 25326 + F 75 -10.1 -2.58544 | opp_overlap 25306, overlap 25304 ACGGCAGGAGGGCAA ACCGAGGAG TTTA CTCCTCGGG GTTGTAGGACTGCGA TERM 23 25325 - 25306 - f 100 -13.6 -3.62096 | opp_overlap 25305 25304 CGGCAGGAGGGCAAA CCGAGGAG TTTA CTCCTCGG GGTTGTAGGACTGCG TERM 24 26017 - 25984 - f 71 -8.9 -3.03412 | overlap 25983 26006 CAATCTCAGATAAAC TCCGAATGCCAACGA GATA TCATCGGCAGTCAGA CTGCGAGTGCTAAGA TERM 25 29119 - 29131 + F 86 -5.5 -5.70829 | opp_overlap 29119 ATAAAGGGGAAAGAA GACGG TTA TCGTC TTTTTTTGTAATCTT SPy_0019 30546 - 31742 + | putative secreted protein TERM 26 31754 - 31775 + F 100 -11.7 -4.90869 | opp_overlap 31750 CTAACATATTATTTA GGTTAGAAC AGTT GTTCTAACC TTTTTGATTACTCCT prsA.2 31995 - 32957 + | ribose-phosphate pyrophosphokinase TERM 27 32968 - 32990 + F 100 -9.9 -4.75174 | opp_overlap 32968 ATTAAACTTAACGAA GCCTGAGAT AATAG ATCTCGGGC TTTTTGACTTGAATA recO 33143 - 33898 + | DNA repair protein RecO plsX 34001 - 35008 + | putative glycerol-3-phosphate acyltransferase PlsX acpP.2 35001 - 35243 + | acyl carrier protein TERM 28 35247 - 35282 + F 100 -18 -3.53091 | opp_overlap 35250 35253 35259, overlap 35250 35253 35259 CGTTTGACTTAGTTA GAATAATAAAAAGAGC GTAA GCTCTTTTTATTATTC TTTAAAAACGAACCT TERM 29 35279 - 35250 - f 95 -13.9 -3.36878 | opp_overlap 35247 35250 35253 35259, overlap 35253 35259 TTGACTTAGTTAGAA TAATAAAAAGAGC GTAA GCTCTTTTTATTA TTCTTTAAAAACGAA TERM 30 35250 - 35279 + F 100 -13.9 -3.90744 | opp_overlap 35250 35253 35259, overlap 35247 35253 35259 TTGACTTAGTTAGAA TAATAAAAAGAGC GTAA GCTCTTTTTATTA TTCTTTAAAAACGAA TERM 31 35253 - 35276 + F 93 -11.2 -4.08557 | opp_overlap 35250 35253 35259, overlap 35250 35247 35259 ACTTAGTTAGAATAA TAAAAAGAGC GTAA GCTCTTTTTA TTATTCTTTAAAAAC TERM 32 35276 - 35253 - f 90 -11.2 -3.82378 | opp_overlap 35253 35250 35247 35259, overlap 35250 35259 ACTTAGTTAGAATAA TAAAAAGAGC GTAA GCTCTTTTTA TTATTCTTTAAAAAC TERM 33 35259 - 35270 + F 86 -5.8 -5.40014 | opp_overlap 35253 35250 35259, overlap 35253 35250 35247 TTAGAATAATAAAAA GAGC GTAA GCTC TTTTTATTATTCTTT TERM 34 35270 - 35259 - f 84 -5.8 -5.34365 | opp_overlap 35259 35253 35250 35247, overlap 35253 35250 TTAGAATAATAAAAA GAGC GTAA GCTC TTTTTATTATTCTTT purC 35364 - 36098 + | phosphoribosylaminoimidazole-succinocarboxamide synthase TERM 35 37994 - 37974 - g 72 -4.7 -4.66163 | ACCGTTACTGAAAAA CCAAATCTT GTC ATGACTTGG AATGGCGAAATCATC SPy_0025 36174 - 39947 + | putative phosphoribosylformylglycinamidine synthase II TERM 36 39970 - 39944 - f 77 -9.6 -3.13177 | opp_overlap 39951, overlap 39951 ATACTTTACAGGGAA GTAAAAAGGTTC AGT GAACCTTTTTAG CCCTCGCCTTGAATT TERM 37 39963 - 39951 - f 88 -7.7 -4.89009 | opp_overlap 39951, overlap 39944 ACAGGGAAGTAAAAA GGTTC AGT GAACC TTTTTAGCCCTCGCC TERM 38 39951 - 39963 + F 82 -7.7 -4.59773 | opp_overlap 39951 39944 ACAGGGAAGTAAAAA GGTTC AGT GAACC TTTTTAGCCCTCGCC purF 40108 - 41562 + | amidophosphoribosyltransferase TERM 39 41689 - 41668 - g 90 -3.8 -6.01369 | gap 1 GAAAGAATAAAAAAA CACGTTGCT CGTAC AG-AACGTG CGGGAGTCATGGGAG purM 41590 - 42612 + | phosphoribosylaminoimidazole synthetase TERM 40 42665 - 42637 - f 73 -9 -3.15008 | overlap 42635 TTTTATAAGAAAGGA GTGTTTAGTTAG TTTGC CTAACTGAACAC GGGATTAAATTTCTA purN 42780 - 43334 + | phosphoribosylglycinamide formyltransferase TERM 41 43941 - 43928 - T 76 -6.7 -4.58395 | CTCAGCCGCTAAAAA TCACG CTAG CGTGA CCGTTGTGGTTGACC TERM 42 44355 - 44340 - T 71 -7.6 -3.53012 | opp_overlap 44342 GTTGTTGCTCTCAAA CACATG AACC CATGTG GTATCGGACAGGCTG TERM 43 45032 - 45018 - T 74 -6.4 -4.42062 | opp_overlap 45017, overlap 45014 GACGCCGCAAACAAA CATGGC TTG ACCATG ATCTTCACAGGTGTG TERM 44 45094 - 45074 - T 93 -6.2 -5.84381 | opp_overlap 45074 GCATTAATAAAAAAA TGTGGTCT AATTA AAACCACA TTTTTTATTAAAAGA TERM 45 45074 - 45094 + T 79 -4 -5.4505 | opp_overlap 45074 GCATTAATAAAAAAA TGTGGTCT AATTA AAACCACA TTTTTTATTAAAAGA SPy_0031 46247 - 45123 - | putative choline binding protein TERM 46 45909 - 45932 + g 70 -9 -3.26444 | gap 1, opp_overlap 45909, overlap 45907 45905 AGCGTTTTTATCAAA CCAAGCGATAG CCC CTAT-GCTTGG TGTCTTATTCACAGG TERM 47 45932 - 45909 - G 76 -9 -3.72695 | gap 1, opp_overlap 45909 45907 45905 AGCGTTTTTATCAAA CCAAGCGATAG CCC CTAT-GCTTGG TGTCTTATTCACAGG purD 46500 - 47765 + | phosphoribosylamine--glycine ligase TERM 48 47813 - 47799 - f 83 -11.4 -2.78216 | overlap 47796 TAGCGTCAGCAATCA GCGACC GAA GGTCGC TCCAAAAAGAAAGAA TERM 49 48023 - 48006 - f 77 -8.5 -3.64822 | opp_overlap 48001, overlap 48016 ATTTTTCTACGGAAA GTTTCGA CAAG TCGAAAC GCCCCTTTGTATCTT purE 48043 - 48534 + | phosphoribosylaminoimidazole carboxylase catalytic subunit purK 48485 - 49594 + | phosphoribosylaminoimidazole carboxylase ATPase subunit TERM 50 49875 - 49863 - g 72 -3.5 -5.01535 | opp_overlap 49863 CTATAACGATAAAAA TAAAA AAA TTTTA TATTTTATTCAAACT abiR 49621 - 51264 + | abortive infection phage resistance protein purB 51282 - 52574 + | adenylosuccinate lyase TERM 51 52586 - 52601 + F 86 -4.7 -5.63517 | opp_overlap 52586 52575, overlap 52579 TTAATATAAAAAAAA GAAGG TGATTC CCTTC TTTTTTATTTAAAAA TERM 52 52601 - 52586 - f 93 -4.7 -6.10295 | opp_overlap 52579 52586, overlap 52575 TTAATATAAAAAAAA GAAGG TGATTC CCTTC TTTTTTATTTAAAAA SPy_0037 52706 - 53617 + | hypothetical protein ruvB 53843 - 54841 + | Holliday junction DNA helicase B TERM 53 55264 - 55254 - g 75 -5.4 -4.6902 | overlap 55263 CGATAATGTGAAAAA TCTC AAA GAGA TGTCGCAACATCAAT SPy_0039 54979 - 55416 + | putative protein-tyrosine phosphatase SPy_0040 55439 - 55840 + | hypothetical protein TERM 54 56012 - 56024 + G 71 -4.1 -5.00616 | overlap 56013 CAAAAAAAGAGTCTA TCGAT ATT ATCGG TTTTTTAAAAAGACG TERM 55 56816 - 56830 + G 70 -2.8 -5.11836 | overlap 56818 TGTCTCATATTTTGG CAGTTA TTC TAACAG TTTTCTTTTCAATCT SPy_0041 55837 - 57612 + | putative acyltransferase TERM 56 57839 - 57819 - f 83 -4.8 -5.48303 | opp_overlap 57819, overlap 57820 ATAATTTGAAAAAAA CTTCACAA ATTTA TTGTGAAA TGATTTACAAAATTT TERM 57 58582 - 58566 - f 71 -7.9 -3.55761 | TACTCATGTGGGAAA CCTGCCC TTG GGGTAGG TGCTGGTAACGTTCC TERM 58 60587 - 60618 + F 100 -12.6 -5.19275 | opp_overlap 60587 GTTGATACCAGGAAA TGATTTCTTATGAT TAAA GTCATAAGAAATCA TTTTATTTTCTAAAT TERM 59 60618 - 60587 - f 91 -11.9 -3.81951 | opp_overlap 60587 GTTGATACCAGGAAA TGATTTCTTATGA TTAAAG TCATAAGAAATCA TTTTATTTTCTAAAT adhA 60815 - 61831 + | alcohol dehydrogenase TERM 60 61942 - 61888 - f 91 -11.9 -3.61371 | gap 2, opp_overlap 61893, overlap 61893 AAACTTGATTCCAAA TAAAATAGCACTCTCGAGTATCAGAAA ACA TTTTTGA--CTCGAGAGTGCTATTTTG ATACATTGAAAGTTG TERM 61 61893 - 61937 + F 100 -14 -4.30978 | gap 2, opp_overlap 61893 61888 TGATTCCAAATAAAA TAGCACTCTCGAGTATCAGAAA ACA TTTTTG--ACTCGAGAGTGCTA TTTTGATACATTGAA TERM 62 61937 - 61893 - f 100 -11.8 -4.88918 | gap 2, opp_overlap 61893, overlap 61888 TGATTCCAAATAAAA TAGCACTCTCGAGTATCAGAAA ACA TTTTTGA--CTCGAGAGTGCTA TTTTGATACATTGAA SPy_0045 62219 - 63511 + | Na+ driven multidrug efflux pump TERM 63 63498 - 63519 + F 95 -5.9 -6.06723 | opp_overlap 63499, overlap 63499 AAAAGTACCAAGAAA TTACCTTTC ATTA GGAAGGTAG TTTTTTTTTGAAAAA TERM 64 63499 - 63518 + F 75 -7.2 -4.22949 | opp_overlap 63499, overlap 63498 AAAGTACCAAGAAAT TACCTTTC ATTA GGAAGGTA GTTTTTTTTTGAAAA TERM 65 63586 - 63601 + F 71 -7.6 -3.58343 | TTATTATATTGTGGT GCTGTA AAAA TACAGC TTTAGCAATGATACA rpsJ 63712 - 64020 + | 30S ribosomal protein S10 TERM 66 64124 - 64134 + F 79 -4 -5.49568 | CAGAAGCTTTTGTGT TAGA TTT TCTA TTTTTATTTTGAGTT TERM 67 64209 - 64185 - f 70 -2.1 -5.32882 | overlap 64186 64198 64199 TATGAGCACAAAAAA CGCTCGTAAAA AAC TTTTTTGAGCA CAAAAAACGCTCATA TERM 68 64838 - 64810 - g 70 -5.4 -4.40358 | gap 1, overlap 64813 64829 AGTTATCCCAGAAAA GAACGTTATCCTT GTTA AAGG-TAACGTAC CAGGTGCTAAGAAAT TERM 69 64835 - 64813 - g 70 -5.7 -4.32067 | gap 1, overlap 64810 64829 TATCCCAGAAAAGAA CGTTATCCTT GTTA AAGG-TAACG TACCAGGTGCTAAGA rplC 64268 - 64894 + | 50S ribosomal protein L3 rplD 64918 - 65541 + | 50S ribosomal protein L4 TERM 70 65581 - 65568 - g 76 -3.1 -5.28481 | opp_overlap 65575, overlap 65569 GACGTAATCAAAAAA CCAGT TATC ACTGA GAAGTCAATGATTGC rplW 65541 - 65837 + | 50S ribosomal protein L23 rplB 65855 - 66688 + | 50S ribosomal protein L2 TERM 71 66932 - 66914 - g 84 -2.4 -5.83211 | GACGAAAAGAAAAAA GTAATCAA AAC TTGGTCAC GTCGTTCAACGATTT rpsS 66827 - 67105 + | 30S ribosomal protein S19 TERM 72 67163 - 67185 + G 79 -9.2 -3.86106 | overlap 67154 ATGGCTCGTACAGTG CGTGTTTCAC CTC GTAAAACACG TTTAGTACTTGATCT rplV 67121 - 67465 + | 50S ribosomal protein L22 rpsC 67478 - 68131 + | 30S ribosomal protein S3 rplP 68135 - 68548 + | 50S ribosomal protein L16 rpmC 68558 - 68764 + | 50S ribosomal protein L29 rpsQ 68790 - 69050 + | 30S ribosomal protein S17 rplN 69075 - 69443 + | 50S ribosomal protein L14 rplX 69522 - 69827 + | 50S ribosomal protein L24 TERM 73 69823 - 69807 - f 70 -2.2 -5.21709 | opp_overlap 69807 CGTTACAGCAAAAAA TCAGGC GAAGT GCTTGA TTAATCACGAAGGAA rplE 69851 - 70393 + | 50S ribosomal protein L5 TERM 74 70500 - 70487 - g 79 -6.7 -4.56775 | opp_overlap 70487 ACTCGCTGTGAAAAA TGTGG ACGT CCACA TTCAGTTTACCGCAA rpsN 70409 - 70594 + | 30S ribosomal protein S14 TERM 75 70603 - 70639 + F 78 -10.4 -2.60194 | opp_overlap 70603 70598 70605 70610, overlap 70602 70605 70608 70610 TTGGTAAAAATATGA CACAAAACTTAATTTG TTCTT CAGATTAAGTCTTGTG CTTAATTAAAACGGT TERM 76 70639 - 70603 - f 80 -10.4 -3.01831 | opp_overlap 70602 70603 70605 70608 70610, overlap 70598 70605 70610 TTGGTAAAAATATGA CACAAAACTTAATTTG TTCTT CAGATTAAGTCTTGTG CTTAATTAAAACGGT TERM 77 70689 - 70677 - f 73 -7.7 -3.84712 | TAAGCTGATACCAAA GTCCT TTA AGGAC AACATTAACTAGTAA rpsH 70745 - 71143 + | 30S ribosomal protein S8 rplF 71346 - 71882 + | 50S ribosomal protein L6 rplR 71987 - 72343 + | 50S ribosomal protein L18 TERM 78 72594 - 72578 - g 73 -9.5 -3.16564 | overlap 72570 AAAAACATGATCGAA GTACCAA TGG TTGGTAC AACAATCCCTCACGA rpsE 72362 - 72856 + | 30S ribosomal protein S5 rpmD 72871 - 73053 + | 50S ribosomal protein L30 rplO 73267 - 73707 + | 50S ribosomal protein L15 secY 73724 - 75028 + | preprotein translocase subunit SecY TERM 79 75026 - 75061 + F 70 -4.2 -4.66163 | gap 1, opp_overlap 75031 75033 75035, overlap 75031 75032 75035 ATGAATACAGCAGAA TAGAATACA-GGTTGAC ATT GTCAACCTTCTATTTTG TTTTTAAATGACAAT TERM 80 75031 - 75056 + F 79 -4.1 -5.2853 | gap 1, opp_overlap 75031 75033 75035, overlap 75026 75032 75035 TACAGCAGAATAGAA TACA-GGTTGAC ATT GTCAACCTTCTA TTTTGTTTTTAAATG TERM 81 75053 - 75033 - f 72 -8.3 -3.46859 | opp_overlap 75032 75031 75026 75035, overlap 75031 75035 CAGCAGAATAGAATA CAGGTTGAC ATT GTCAACCTT CTATTTTGTTTTTAA TERM 82 75035 - 75051 + F 100 -10.9 -4.1922 | opp_overlap 75033 75031 75035, overlap 75032 75031 75026 GCAGAATAGAATACA GGTTGAC ATT GTCAACC TTCTATTTTGTTTTT TERM 83 75051 - 75035 - f 86 -10.9 -3.29569 | opp_overlap 75035 75032 75031 75026, overlap 75033 75031 GCAGAATAGAATACA GGTTGAC ATT GTCAACC TTCTATTTTGTTTTT adk 75178 - 75816 + | adenylate kinase TERM 84 75850 - 75821 - f 77 -9.5 -3.20126 | opp_overlap 75827, overlap 75818 75827 AACTCAAATAAATTA TACAAATCTACTT GCAT AAGTAGATTAGTA ATGATATACTAGTTT TERM 85 75844 - 75827 - f 75 -7.1 -4.20027 | opp_overlap 75827, overlap 75818 75821 AATAAATTATACAAA TCTACTT GCAT AAGTAGA TTAGTAATGATATAC infA 75934 - 76152 + | translation initiation factor IF-1 rpmJ 76178 - 76294 + | 50S ribosomal protein L36 TERM 86 76522 - 76504 - g 71 -7.4 -3.93288 | GTGGATGCAATCAAA GTTGAAGG TGA CCTTCGAC GTGAAGTAAACATGA rpsM 76312 - 76677 + | 30S ribosomal protein S13 rpsK 76695 - 77078 + | 30S ribosomal protein S11 TERM 87 77596 - 77586 - g 79 -3.2 -5.5074 | overlap 77589 77591 GAAGGCAACAAAAAA GATG ATG CACC TGTGGGTACATTGGC rpoA 77124 - 78062 + | DNA-directed RNA polymerase subunit alpha rplQ 78077 - 78463 + | 50S ribosomal protein L17 TERM 88 78586 - 78636 + F 100 -12.9 -4.92791 | opp_overlap 78586 ATTGTTAATATGTAA CGCTTGTTTATGAAAGGTATCTA AGCTA TAGAAACTTTTTATAAGCAGGCG TTTTGTTGTATTATG TERM 89 78708 - 78694 - f 77 -8.6 -3.70437 | opp_overlap 78693 78691, overlap 78692 78699 AGCAAAACAATAACA CAGAAG CCT CTTCTG ATGCGTTTATAAAGT TERM 90 78847 - 78835 - f 82 -4.1 -5.41746 | overlap 78836 AATGTCCGAAAAAAA CTTGC ATC GCAAA CAGATGCTCAAACTA TERM 91 79260 - 79246 - f 93 -8.6 -4.65032 | GAAACGAGAAATAAA TCTGTC AGC GACAGA AGGAACGAGTAAGTT TERM 92 81543 - 81524 - f 91 -12.2 -3.62096 | opp_overlap 81523 81522 CGGCAGGAGGGCAAA CCGAAGTG TTTA CACTTCGG GGTTGTAGGACTGCG TERM 93 82235 - 82202 - f 71 -8.9 -3.03412 | overlap 82201 82224 CAATCTCAGATAAAC TCCGAATGCCAACGA GATA TCATCGGCAGTCAGA CTGCGAGTGCTAAGA TERM 94 85453 - 85484 + F 100 -10.4 -4.43012 | opp_overlap 85460, overlap 85451 85460 GGCCGCCGGTATACT TGAAAAACAAGGTT TGTA AACCTTGTTTTTTG TTTTGATCTTAAGCT TERM 95 85477 - 85460 - f 89 -8.5 -4.64766 | opp_overlap 85451 85453 85460 GGTATACTTGAAAAA CAAGGTT TGTA AACCTTG TTTTTTGTTTTGATC TERM 96 85460 - 85477 + F 100 -8.5 -5.83211 | opp_overlap 85460, overlap 85451 85453 GGTATACTTGAAAAA CAAGGTT TGTA AACCTTG TTTTTTGTTTTGATC SPy_0084 85708 - 85893 + | hypothetical protein TERM 97 87103 - 87087 - f 70 -4.5 -4.81249 | TGCCAAACCGAAAAA CAAACTA TAA TAGTTTA AAAGGACTTTGCAAG adcR 87214 - 87657 + | putative repressor protein TERM 98 87893 - 87862 - g 73 -2.4 -5.33985 | gap 1, opp_overlap 87871 87883, overlap 87865 87871 87881 GCTAAAAAAAATAAA GAC-GGTAAACAATT AAG AATTGCTTACTTGCC GCAGCAAGTAGCTAG adcC 87661 - 88380 + | ABC transporter ATP-binding protein adcB 88373 - 89188 + | putative ABC transporter (permease) TERM 99 89198 - 89222 + T 100 -15.9 -4.57482 | opp_overlap 89198 TTTTAATAAGAAAAA TCCTCACATGT TTA ACATGTGAGGA TTTATTTATAAATGC TERM 100 89222 - 89198 - T 100 -15.9 -5.29445 | opp_overlap 89198 TTTTAATAAGAAAAA TCCTCACATGT TTA ACATGTGAGGA TTTATTTATAAATGC SPy_0095 89611 - 89228 - | putative histidine triad (HIT) protein TERM 101 89398 - 89425 + g 80 -10.6 -3.36878 | CTGAAATGGGAAGGT GCTGCTCTAGCT TAGC AACTAGAGCGGC TTGTAAGTCGATGAG TERM 102 89648 - 89635 - R 90 -8.1 -5.14563 | opp_overlap 89635 CTCCTTATGAAAAAA CGAGC CAGA GCTCG TTTAATCGGTTATCT TERM 103 89635 - 89648 + r 75 -8.1 -3.81259 | opp_overlap 89635 CTCCTTATGAAAAAA CGAGC CAGA GCTCG TTTAATCGGTTATCT tyrS 90918 - 89662 - | tyrosyl-tRNA synthetase TERM 104 91105 - 91123 + G 85 -2.5 -5.86465 | gap 1 GGTGCTATTACGTAC GTTGAGAC TACT GTCT-AAC TTTTTTTATATTGTT pbp1b 91010 - 93322 + | putative penicillin-binding protein 1b TERM 105 93407 - 93447 + F 77 -4.8 -5.1104 | opp_overlap 93407 93409, overlap 93409 TCCAGTTAGGAAGAA CAGCAGTTAAATCACACT GATAA AGTCAGATTTAGCTGCTC TTTTTGTGTCTATTT TERM 106 93409 - 93445 + F 78 -7.4 -4.15325 | opp_overlap 93407 93409, overlap 93407 CAGTTAGGAAGAACA GCAGTTAAATCACACT GATAA AGTCAGATTTAGCTGC TCTTTTTGTGTCTAT rpoB 93586 - 97152 + | DNA-directed RNA polymerase subunit beta rpoC 97243 - 100884 + | DNA-directed RNA polymerase subunit beta' TERM 107 100895 - 100910 + F 79 -4.6 -5.38951 | AATAATCTCATGAAA GGGTCC TTAG GGGCTC TTTTTTGTCTGAGTT SPy_0100 101036 - 101401 + | putative DNA binding protein TERM 108 101457 - 101431 - f 74 -6.8 -4.41817 | opp_overlap 101431, overlap 101426 CAAAATAAGTTAAAA GAAAATATCA CTTCTTC TGATATTTTC TTTTTTTGTTTACGA TERM 109 101431 - 101457 + F 95 -6.8 -5.95539 | opp_overlap 101431 101426 CAAAATAAGTTAAAA GAAAATATCA CTTCTTC TGATATTTTC TTTTTTTGTTTACGA TERM 110 101525 - 101515 - g 70 -5.4 -4.33105 | opp_overlap 101507, overlap 101516 CAAGCATTAGCAAAA GCTA TTC TAGC AAAAGCTGAACAGGT TERM 111 101575 - 101587 + G 91 -6.3 -5.42259 | opp_overlap 101575 ATTTTGCCAAGAGCA GATCA ATA TGATC TTTTTTTACGAATAG comYA 101494 - 102432 + | putative ABC transporter subunit ComYA TERM 112 102533 - 102519 - f 71 -5.7 -4.56597 | opp_overlap 102504 102523 102526, overlap 102523 TTGCTTTTTTAAAAA GAAGC CAGTT GCTTC AGCTAGATTATGTTC TERM 113 102950 - 102960 + G 73 -8.2 -3.81575 | TTGAAACTCTATAGT CGGC TAA GCCG TTATCCTTTTTTAGG comYB 102554 - 103402 + | putative competence protein, ABC transporter subunit comYC 103404 - 103730 + | putative competence protein SPy_0104 103705 - 104133 + | putative competence protein SPy_0105 104138 - 104374 + | hypothetical protein comYD 104367 - 104801 + | putative competence protein SPy_0107 104785 - 105111 + | hypothetical protein SPy_0108 105209 - 106162 + | hypothetical protein TERM 114 106155 - 106166 + F 77 -3 -5.58179 | GGAAACTGAGTAATG TCAA TTAA TTGA TTTTTTGTTATAATA TERM 115 106232 - 106222 - g 75 -5.4 -4.6644 | AAGAGAGGTTAAAAA TGTC AAA GACA ATTGCAATTAATGCA ackA 106221 - 107417 + | acetate kinase TERM 116 107432 - 107420 - f 89 -7.7 -5.2894 | AAATACAAAATAAAA GAGAC TAA GTCTC AATAGATTAACCAAG TERM 117 107467 - 107443 - f 81 -10.1 -3.37493 | opp_overlap 107443, overlap 107447 GTCTCAATAGATTAA CCAAGTAAGGT AAC ACTTTACTTGG TTTTTTATGAGGTTT TERM 118 107443 - 107467 + F 100 -12.3 -5.28826 | opp_overlap 107443 107447 GTCTCAATAGATTAA CCAAGTAAGGT AAC ACTTTACTTGG TTTTTTATGAGGTTT SPy_0110 107604 - 107912 + | hypothetical protein proC 108765 - 107995 - | pyrroline-5-carboxylate reductase pepA 109880 - 108813 - | putative glutamyl-aminopeptidase TERM 119 110005 - 109981 - R 93 -7.2 -5.58522 | overlap 109983 CACAGAAAAGAAAAA TCCCAGAGAC TAGAG ATCTCTGGAA GAAGTGTTTGTCTTT SPy_0116 110154 - 109990 - | hypothetical protein SPy_0117 110345 - 110629 + | hypothetical protein TERM 120 110700 - 110722 + T 75 -9.8 -2.60206 | overlap 110699 110698 110702 GGTGTTATTTTTTAC GGCAGACTGG TGT CCAGACTGTC AATTTATTTATCCTA TERM 121 111656 - 111637 - T 88 -5.8 -5.67967 | gap 1, opp_overlap 111637 ATGACCAGAAAAAAA GGATT-AGG AGC CCTTAATCC TTTTTTCTTATGTTT TERM 122 111637 - 111656 + T 93 -7.2 -5.66338 | opp_overlap 111637 ATGACCAGAAAAAAA GGATTAGG AGCC CTTAATCC TTTTTTCTTATGTTT SPy_0121 113035 - 112394 - | putative deoxyguanosine kinase/deoxyadenosine kinase(I) subunit SPy_0122 114032 - 113055 - | tRNA-dihydrouridine synthase TERM 123 113932 - 113908 - G 79 -9.3 -3.86944 | TCCATAACCACCAAA CCAGCACCAAA TTC TTTGGCGATGG TACGAAAGGCAGAAT hslO 114891 - 114019 - | Hsp33-like chaperonin TERM 124 114703 - 114720 + g 70 -3.4 -4.8622 | opp_overlap 114686, overlap 114686 ACCAATCACTTTGAC GGTGAT TTTACT ATCGCC TTTTTGATTAGCCGC TERM 125 114990 - 114971 - R 79 -4.3 -5.25893 | gap 1, opp_overlap 114971 ATAGACAGTAAAAAA TCCCAGAG AATGA CTC-GGGA TTAAGTTAAGGTGTG TERM 126 115016 - 115037 + r 79 -8.7 -3.77721 | GTGTGGTCTAAAGTC GCGCAATGT GGTG ACATGGCGC TTATGTTAATTGCTT rofA 116531 - 115038 - | regulatory protein TERM 127 117632 - 117585 - H 78 -7.3 -4.40894 | gap 2 TAAAGGATACCAAAA TCT-TTTGAG-TGGTGGTTTAGT TCCT ACTAAACCACCAACTCCAGGAGA CCCACCAATGCCTCC SPy_0127 119222 - 119617 + | putative signal peptidase I SPy_0128 119650 - 120672 + | hypothetical protein SPy_0129 120682 - 121395 + | hypothetical protein SPy_0130 121417 - 122064 + | hypothetical protein TERM 128 122153 - 122130 - T 80 -4.7 -5.24003 | opp_overlap 122130 AAGAAAAACCAAAAA TTCCTTTAC TTAATG ATAAAGGAA TTTTTTATTGCCCCA TERM 129 122130 - 122153 + T 79 -4 -5.4505 | opp_overlap 122130 AAGAAAAACCAAAAA TTCCTTTA CTTAATGA TAAAGGAA TTTTTTATTGCCCCA TERM 130 122216 - 122244 + T 71 -5.3 -4.56133 | opp_overlap 122216, overlap 122210 AAGGTATATTGAAAA CCTCCAAAGTT TCTAATT GACTCTGGAGG TTTTGATTATTGACA TERM 131 122244 - 122216 - T 71 -6.8 -4.24606 | opp_overlap 122216 122210 AAGGTATATTGAAAA CCTCCAAAGT TTCTAATTG ACTCTGGAGG TTTTGATTATTGACA SPy_0131 123603 - 122251 - | hypothetical protein TERM 132 123709 - 123723 + r 89 -8.6 -4.36778 | overlap 123695 GGGCTAGCTCATTAG CCATTG TTT CAATGG TTTTGGCTTGTGTTT TERM 133 123805 - 123830 + r 72 -4.7 -4.7657 | opp_overlap 123805, overlap 123807 TATACCTGAAGAAAA GCCATGAGTTC AATA GAAATCATGAC TTTTTGAAATTTTTA TERM 134 123830 - 123805 - R 83 -6.9 -4.66987 | opp_overlap 123805 123807 TATACCTGAAGAAAA GCCATGAGTTC AATA GAAATCATGAC TTTTTGAAATTTTTA SPy_0133 124164 - 123814 - | hypothetical protein SPy_0135 124468 - 125223 + | sortase TERM 135 125271 - 125251 - T 100 -13.3 -4.20769 | opp_overlap 125251 AGATTGTAATAGAAA CTGGTGGAC TTT GCCCACCAG TTTTTTGGGGTACGG TERM 136 125251 - 125271 + T 100 -11.1 -5.0538 | opp_overlap 125251 AGATTGTAATAGAAA CTGGTGGAC TTT GCCCACCAG TTTTTTGGGGTACGG TERM 137 125376 - 125347 - T 85 -4.4 -5.59962 | gap 1 TAAAAGAAATAAAAA GAGTCTGAG-CAA TCATG TTGTCTTAGACTC TGACTGTATTATGCA SPy_0136 126082 - 125417 - | hypothetical protein TERM 138 125844 - 125833 - G 76 -4.4 -5.1356 | CCTTAGGAAGAAAAA CTGA GAAA TCAG GGTAAACCCATTGTT TERM 139 126130 - 126152 + H 89 -7.2 -5.33785 | opp_overlap 126116 126130 ATTATAACAAAAAAA CTAAAAAGTA AAT TATTTTTTAG TTTTTTATCATAATT TERM 140 126152 - 126130 - H 91 -5 -5.89921 | opp_overlap 126130, overlap 126116 ATTATAACAAAAAAA CTAAAAAGTA AAT TATTTTTTAG TTTTTTATCATAATT atoE 126461 - 127837 + | putative short-chain fatty acids transporter SPy_0140 128936 - 130120 + | putative acetyl-CoA acetyltransferase atoD.2 130132 - 130791 + | putative acetyl-CoA:acetoacetyl-CoA transferase alpha subunit SPy_0142 130794 - 131441 + | butyrate-acetoacetate CoA-transferase, beta subunit SPy_0144 132243 - 131563 - | hypothetical protein SPy_0145 132417 - 132782 + | hypothetical protein SPy_0146 132819 - 133838 + | putative regulatory protein SPy_0147 134293 - 134613 + | hypothetical protein TERM 141 134763 - 134747 - g 77 -8 -4.1552 | overlap 134734 GATGCTTTTAACAAA GGCAAC GTCAA GTTGCC ACAAATCGTCCAATA TERM 142 136086 - 136098 + G 78 -4.1 -5.27476 | overlap 136082 CGGCCTATACGTCAA GTCTA GCT TGGAC TTTTATTTTATTAGG ntpI 134603 - 136603 + | V-type ATP synthase subunit I ntpK 136605 - 137084 + | V-type ATP synthase subunit K TERM 143 137124 - 137114 - f 71 -3.2 -5.07567 | CTAGATTTTAAAAAA CGGT GAC ACCA CTAACACTATCAAAA ntpE 137152 - 137736 + | putative V-type Na+ -ATPase subunit E ntpC 137752 - 138750 + | putative V-type Na+ -ATPase subunit C TERM 144 139448 - 139476 + G 100 -14.7 -3.92641 | opp_overlap 139454 TCAGGGATCGGTCCA GGAGAACCAGTAG TGA CTACTGGTTGTCC TTTGTCGGTCGAGTT TERM 145 139470 - 139454 - g 80 -10.9 -3.40522 | opp_overlap 139448 ATCGGTCCAGGAGAA CCAGTAG TGA CTACTGG TTGTCCTTTGTCGGT TERM 146 140441 - 140457 + G 70 -8.7 -3.35224 | overlap 140439 GCCATCGGCGCGGTT TCTCCTC CTG GAGGGGA TATTTCAGAGCCTGT ntpA 139268 - 141043 + | V-type ATP synthase subunit A TERM 147 141947 - 141935 - g 72 -3.3 -5.03314 | TTGATCGGGAAAAAA GGGTC AGT GACTC AAATTCCTATTTTAA ntpB 141044 - 142459 + | V-type ATP synthase subunit B ntpD 142504 - 143130 + | V-type ATP synthase subunit D TERM 148 143181 - 143218 + T 74 -5.6 -4.66609 | gap 1, opp_overlap 143181 TTAAGTAGTAAAAAA GCAAGCCATCA-AAGGG ATTAA CCTAACTGATGGCTTGC TTTTTAAGTAGCGTG TERM 149 143218 - 143181 - T 85 -6.5 -5.2189 | gap 2, opp_overlap 143181 TTAAGTAGTAAAAAA GCAAGCCATCAA--AGG GATTAA CCTAACTGATGGCTTGC TTTTTAAGTAGCGTG SPy_0158 144512 - 143250 - | putative toxic anion resistance protein SPy_0159 145403 - 144525 - | hypothetical protein purA 145841 - 147133 + | adenylosuccinate synthetase TERM 150 147152 - 147174 + F 83 -7 -4.7339 | opp_overlap 147152 GTCTAGTATGACAAA GAGTTGGATA GCG TTTCCAGCTC TTTTTACCGTTTGTT TERM 151 147242 - 147275 + F 83 -11.3 -2.75349 | overlap 147240 147245 AGTTTTGTCGTTGTC TTATCTCCTTAAGAG GTGA TTTTTAAGGAGATAA TGGGTTTTACCAGTT TERM 152 147947 - 147935 - g 72 -3.4 -5.09245 | opp_overlap 147935 CTAAAACGACAAAAA CCAA GCAAG TTGG TTTTGTAGGTGGTAT SPy_0163 147475 - 148503 + | putative ABC transporter (lipoprotein) TERM 153 148518 - 148547 + F 100 -10.1 -4.72986 | opp_overlap 148517 AAACTGTACAATACC GTCCAGAGTCG TCACGAAC CGACTTTGGAC TTTTTAATAAAGGTG nusG 148676 - 149215 + | transcription antitermination protein NusG TERM 154 149255 - 149225 - f 73 -8.4 -3.55071 | opp_overlap 149220 149225 CTATAGGCTCTCAAA GGTTTGATGGTA TAAGTAT TACCATCAGACC TTTTTTAGTTGGAAG TERM 155 149225 - 149255 + F 100 -10.6 -5.26875 | opp_overlap 149225, overlap 149220 CTATAGGCTCTCAAA GGTTTGATGGTA TAAGTAT TACCATCAGACC TTTTTTAGTTGGAAG TERM 156 150147 - 150129 - g 74 -6 -4.43844 | opp_overlap 150143 CCATCAGGGACAAAA CAAGGATA TTT TAGCCTTG TCAGAGGTCACTTTT TERM 157 150472 - 150456 - g 95 -4.4 -5.78622 | CGATGCTAAAAAAAA GTCAAC GATTG GTCGAC AAGAAAACGGTCTTT nga 149587 - 150930 + | NAD glycohydrolase SPy_0166 151064 - 151420 + | hypothetical protein TERM 158 151424 - 151413 - f 77 -3 -5.40014 | overlap 151407 AAAGAACAATAAAAA CATT TTAG AATG ATAAAAAGGTATGAA TERM 159 151834 - 151824 - g 73 -5.4 -4.58663 | AGTACTTGCTAAAAA TGGT GAA ACCA TTGAAAATTTTGTTC slo 151444 - 153159 + | streptolysin O precursor TERM 160 153164 - 153207 + F 91 -12.7 -3.30441 | gap 1, opp_overlap 153173 153175 153178, overlap 153164 CTTATAAGTAGGACT GG-TTCAAGAGATAAGCACC TTGAT GCTGCTTATCTCTTGAGGCC TTGTGCCCACTCCTC TERM 161 153164 - 153206 + F 87 -12.9 -2.5805 | opp_overlap 153173 153175 153178, overlap 153164 CTTATAAGTAGGACT GGTTCAAGAGATAAGCACC TTGAT GCTGCTTATCTCTTGAGGC CTTGTGCCCACTCCT TERM 162 153241 - 153271 + F 100 -13.5 -5.23316 | opp_overlap 153241 CAAATACAGAAAAAA GCTTGTCTATGAG ATACC TTCATAGACAAGC TTTTTTGATATACTA TERM 163 153271 - 153241 - f 100 -12.8 -5.51046 | opp_overlap 153241 CAAATACAGAAAAAA GCTTGTCTATGA GATACCT TCATAGACAAGC TTTTTTGATATACTA SPy_0168 153409 - 153837 + | hypothetical protein TERM 164 153882 - 153854 - T 88 -7.5 -4.97312 | opp_overlap 153854 AAAATGAATTAAAAA CAGCCTTTAAC TGCTAAT GTGAAAGGCTG TTTTTTTAGGATATG TERM 165 153854 - 153882 + T 93 -7.5 -5.45726 | opp_overlap 153854 AAAATGAATTAAAAA CAGCCTTTAAC TGCTAAT GTGAAAGGCTG TTTTTTTAGGATATG TERM 166 153973 - 153952 - T 85 -6.6 -5.36441 | opp_overlap 153952 CGGCCACACAAAAAA GCAATAGC TTTGAC GCCATTGC TTTTCTAGCATAATC SPy_0169 154239 - 154039 - | hypothetical protein TERM 167 154596 - 154569 - R 100 -12 -4.88407 | opp_overlap 154567 154569 TTAGCCAATCAAAAA GCCTAAGGCTGC TTAT GCAGTCCTAGGC TTTTCATAACCGTAG TERM 168 154569 - 154596 + r 100 -12 -4.26076 | opp_overlap 154569, overlap 154567 TTAGCCAATCAAAAA GCCTAAGGCTGC TTAT GCAGTCCTAGGC TTTTCATAACCGTAG SPy_0170 154818 - 154651 - | hypothetical protein SPy_0171 155329 - 155003 - | hypothetical protein TERM 169 155082 - 155048 - G 84 -8 -4.8066 | AAGATAATTTAAAAA GCACCAAAACCAATTA GAA CAATCATTTTTGGTGC TAGAAGTTTCACTCT TERM 170 155714 - 155728 + H 77 -5 -5.04601 | AGGTTAGCAGATCAC GCTTTT TTG AAGAGC TTTTTGGTTTGTGCA metB 155813 - 156952 + | putative cystathionine beta-lyase TERM 171 156934 - 156945 + F 70 -4.4 -4.71061 | ATTAGCCGATTTTGA GCAA GCAC TTGC TTTTTAAGTCTGGCT leuS 157127 - 159628 + | leucyl-tRNA synthetase TERM 172 159746 - 159723 - f 100 -14 -4.88067 | opp_overlap 159723 ACTTATCTAGAAAAA CCACAAGAAC GAAG GTTCTTGTGG TTTTTAATCGTTGTT TERM 173 159723 - 159746 + F 100 -14 -4.83593 | opp_overlap 159723 ACTTATCTAGAAAAA CCACAAGAAC GAAG GTTCTTGTGG TTTTTAATCGTTGTT TERM 174 159992 - 159961 - g 72 -8.8 -3.53811 | CCTAGCTCCCCTAAA CTGGTTCTCGCAAA ATAT TTTGCAAAACCCAG CGTTCTTTGTAGGTC TERM 175 160643 - 160659 + G 73 -7.3 -3.96696 | overlap 160653 ATTTTCCATGATACT GTTGTTG CGT CAGCAAC TTTGATGTTGGTCTT ulaA 159941 - 161368 + | ascorbate-specific PTS system enzyme IIC SPy_0175 161439 - 161717 + | PTS system, 3-keto-L-gulonate specific IIB component SPy_0176 161839 - 162324 + | PTS system, 3-keto-L-gulonate specific IIA component ulaD 162415 - 163077 + | 3-keto-L-gulonate-6-phosphate decarboxylase SPy_0178 163082 - 163945 + | putative L-xylulose 5-phosphate 3-epimerase araD 163947 - 164651 + | L-ribulose-5-phosphate 4-epimerase TERM 176 164725 - 164747 + G 89 -9.9 -4.19258 | TGTTAATCATTGTTT GGGCAAGTC CTTTT GACTTGTCC TTTTCGATGAACTGT SPy_0180 164709 - 164855 + | hypothetical protein TERM 177 166032 - 166050 + G 80 -2.4 -5.65513 | overlap 166034 TGTAAGGCGCTCGTT TACCGTAA AGC TTATGGGA TTTTTTTAGTTAATC SPy_0181 164979 - 166622 + | putative transcriptional regulator TERM 178 166845 - 166827 - f 73 -9 -3.19568 | overlap 166826 TCATTGACAAGAAAG TCTATACT TAA AGTATAGA AACGAAGAACAAATT SPy_0182 166875 - 167966 + | putative L-ascorbate 6-phosphate lactonase opuAA 168454 - 169650 + | putative glycine betaine/proline ABC transporter ATP-binding protein TERM 179 169890 - 169879 - g 89 -5.8 -5.4505 | opp_overlap 169853 CTTGCTAAGAAAAAA TGGC CTTT GCCA ACCTTTACCTTGTTA TERM 180 170561 - 170515 - g 83 -6 -5.11112 | gap 1, opp_overlap 170531 170551 170551 170552 170560, overlap 170521 AAACCTCAAGAAAAA GCCAAAGCTGGCAAAACCAAT AAATGG ATTGGTTTAGC-AGCCCTTGC TGTCTTTTTGATAGC TERM 181 170555 - 170521 - g 71 -6.6 -4.05495 | gap 1, opp_overlap 170531 170551 170551 170552, overlap 170515 CAAGAAAAAGCCAAA GCTGGCAAAACCAAT AAATGG ATTGGTTTAGC-AGC CCTTGCTGTCTTTTT opuABC 169666 - 171393 + | putative glycine-betaine binding permease protein TERM 182 171423 - 171442 + F 93 -8.6 -4.74103 | opp_overlap 171416 171423 ATAGCAAATAGAGAA GTCTAGGA ATTA TCCTAGGC TTTTTAGGTTAACCA TERM 183 172042 - 172004 - g 70 -2.5 -5.07107 | overlap 172006 GAAATTTCTAAAAAA GGGGT-AGCCGAATTTGAA GAA TTCACAC-CGGCTTACCTC ATGGAAAAAATGGGA polA 171524 - 174166 + | DNA polymerase I SPy_0186 174353 - 174808 + | hypothetical protein spf 174860 - 175327 + | ferric transport regulator protein TERM 184 175369 - 175342 - f 77 -8.6 -3.61268 | opp_overlap 175346, overlap 175334 175346 GAGTTAACCCTTAAA TAAAGGCATTAT AAAT ATAGTGCCTTTA CAAATCAAAAACCCC vlg 175483 - 175782 + | regulatory protein TERM 185 176671 - 176681 + G 74 -4 -5.01823 | overlap 176678 AAGACATATGGCATG CTTA CTA TAAG TTTTCTTATTCTTAT SPy_0189 176004 - 177338 + | hypothetical protein TERM 186 177645 - 177624 - g 70 -9.5 -2.67441 | opp_overlap 177612, overlap 177612 177621 177629 TAAGTCATTAGACTA TCGAATGGC TTCT ACCATTCGA CATAATAGAGCTAGA SPy_0190 177331 - 177861 + | hypothetical protein TERM 187 177918 - 177940 + G 95 -11.4 -4.74706 | opp_overlap 177918 177915 177912 TATCATTAACAACGA GAGAGAATCA GAT TGGTTCTCTC TTTTTGGATGTTCAA SPy_0191a 177854 - 178063 + | hypothetical protein SPy_0195 179339 - 179046 - | hypothetical protein TERM 188 179150 - 179195 + g 77 -4.8 -4.93316 | gap 1, opp_overlap 179159, overlap 179152 179159 TTGTCTCAAATTGAG CAT-GACGAAGTGCGCTCCCA TGTCC TGGGAACGCACTTTCTCCATA TTTTTCATATTCTTG TERM 189 179152 - 179193 + g 73 -7.4 -4.06487 | gap 1, opp_overlap 179159, overlap 179150 179159 GTCTCAAATTGAGCA T-GACGAAGTGCGCTCCCA TGTCC TGGGAACGCACTTTCTCCA TATTTTTCATATTCT TERM 190 179185 - 179159 - G 95 -14.5 -3.23395 | opp_overlap 179152 179150 179159 ATTGAGCATGACGAA GTGCGCTCCCA TGTCC TGGGAACGCAC TTTCTCCATATTTTT TERM 191 179159 - 179185 + g 93 -12.3 -4.02468 | opp_overlap 179159, overlap 179152 179150 ATTGAGCATGACGAA GTGCGCTCCCA TGTCC TGGGAACGCAC TTTCTCCATATTTTT SPy_0196 180727 - 179417 - | putative integral membrane protein TERM 192 181572 - 181600 + G 70 -8.7 -3.28173 | opp_overlap 181587, overlap 181570 181573 GAAGTGGAAAGCCTT GCTGCTGCCGAAG AAG CTGCGGCGGCGGG TGTTGATATTATCAT TERM 193 181573 - 181599 + G 81 -12.2 -2.56181 | opp_overlap 181587, overlap 181572 181570 AAGTGGAAAGCCTTG CTGCTGCCGAAG AAG CTGCGGCGGCGG GTGTTGATATTATCA nadC 180951 - 181823 + | nicotinate-nucleotide pyrophosphorylase TERM 194 182126 - 182170 + T 100 -15.4 -4.62054 | opp_overlap 182123 182132, overlap 182127 182132 TTGGACAAATAATTA TTGAAAGGATTTAGTTCTGT ATTGG ACAGGACTAAATCCTTTTAG TTTTGCTTTAATTCG TERM 195 182127 - 182169 + T 100 -16.7 -3.36148 | opp_overlap 182123 182132, overlap 182126 182132 TGGACAAATAATTAT TGAAAGGATTTAGTTCTGT ATTGG ACAGGACTAAATCCTTTTA GTTTTGCTTTAATTC TERM 196 182132 - 182164 + T 100 -14.4 -4.74084 | opp_overlap 182123 182132, overlap 182127 182126 AAATAATTATTGAAA GGATTTAGTTCTGT ATTGG ACAGGACTAAATCC TTTTAGTTTTGCTTT TERM 197 182164 - 182132 - T 91 -12.2 -3.74658 | opp_overlap 182132 182127 182126, overlap 182123 AAATAATTATTGAAA GGATTTAGTTCTGT ATTGG ACAGGACTAAATCC TTTTAGTTTTGCTTT SPy_0198 182929 - 182123 - | putative transposase, IS861 SPy_0199 183465 - 182950 - | hypothetical protein TERM 198 183374 - 183399 + g 70 -7.7 -3.75665 | overlap 183375 TTGAGATCGGATTCT GCCATATCAAA CTTT TTTGATATGGA TTTAATGGACTCTCC TERM 199 183375 - 183398 + g 80 -11.2 -2.85078 | overlap 183374 TGAGATCGGATTCTG CCATATCAAA CTTT TTTGATATGG ATTTAATGGACTCTC TERM 200 183516 - 183473 - R 93 -7.6 -5.63504 | gap 1, opp_overlap 183486, overlap 183475 AATTTCATAAAAAAA TAGCACCCCAATCGTTAGA TTTTGTG TCTAACTTTTGGGGTGC-A GTTCAAGGGCTATTT TERM 201 183515 - 183475 - R 100 -12.7 -4.45201 | opp_overlap 183486, overlap 183473 TTTCATAAAAAAATA GCACCCCAATCGTTAGA TTTTGTG TCTAACTTTTGGGGTGC AGTTCAAGGGCTATT SPy_0201 184414 - 183551 - | hypothetical protein TERM 202 184688 - 184677 - g 73 -5.8 -4.63172 | TATCAAAGCAGAAAA GCAC ACCG GTGC ACGCTTGGGCGAAAT tgt 184633 - 185775 + | queuine tRNA-ribosyltransferase TERM 203 185793 - 185828 + F 100 -9.8 -5.71712 | AAAAATGCTATGATC CTGGAACTGAGGGCGA TCTA TCGTCTTTGGTTTCAG TTTTTTTGTATAGAC SPy_0205 185992 - 186303 + | hypothetical protein SPy_0207 186307 - 186846 + | putative biotin synthase TERM 204 186878 - 186909 + F 100 -16 -4.76041 | opp_overlap 186880 TTAAGTTGTGTTGAA CAGGTCTTGGCAGA TTTA TCTGCTAGGACCTG TTTTTGGTGGGTCTC SPy_0208 186986 - 187765 + | hypothetical protein SPy_0210 190126 - 188894 - | hypothetical protein TERM 205 188995 - 188983 - G 71 -6.3 -4.20932 | opp_overlap 188983 188981 AATACTGATTGAAAA GGTTA TGA TAACC TGTTTGATTCGTCGT TERM 206 189585 - 189595 + g 83 -3.2 -5.58179 | CTGCCTGATTGATAG GCTT CAA AGGC TTTTTTATTGTAGTC TERM 207 190268 - 190281 + H 71 -5.3 -4.4959 | AAAATGAAGCTATGC TCACT TGAA AGTGA TTTTACTTAGTTGGA speG 190526 - 191230 + | exotoxin G precursor TERM 208 191451 - 191462 + F 89 -7.2 -5.2112 | opp_overlap 191450 TTATTACGGTAAAGC GGCC TCAG GGCC TTTTTTCATGATATT TERM 209 192159 - 192169 + G 70 -5.4 -4.41047 | TATTGCCTTTCGCGT GTTC AAA GAAC TTTTGGTTAAAAAAT pgi 191686 - 193035 + | glucose-6-phosphate isomerase TERM 210 193197 - 193149 - T 100 -20.6 -4.43309 | opp_overlap 193156 193160 CAAGGTTAAGTAAAA GGGATAATAAAGTGCGCTTCCA GAACA TGGGAGCGCACTTTATTATACC AAATTTCAGATAAGA TERM 211 193156 - 193190 + T 100 -18.1 -3.32294 | opp_overlap 193149, overlap 193160 AAGTAAAAGGGATAA TAAAGTGCGCTTCCA GAACA TGGGAGCGCACTTTA TTATACCAAATTTCA TERM 212 193160 - 193186 + T 100 -14.5 -4.30987 | opp_overlap 193149, overlap 193156 AAAAGGGATAATAAA GTGCGCTTCCA GAACA TGGGAGCGCAC TTTATTATACCAAAT TERM 213 193373 - 193339 - T 71 -7.9 -3.69621 | overlap 193304 193341 AGTGACAACCTTAAA GACCCTCCTAGAC TGTGAAAGT ATCTAGGAGGGAC TGTCAAAAAATTAAG TERM 214 193371 - 193341 - T 79 -9.1 -3.4268 | overlap 193304 193339 TGACAACCTTAAAGA CCCTCCTAGAC TGTGAAAGT ATCTAGGAGGG ACTGTCAAAAAATTA SPy_0216 194892 - 193384 - | putative regulatory protein - RofA related TERM 215 194780 - 194761 - G 72 -9.4 -3.08088 | AAATTGTCGAAGATA CTGCTTTA TTTT TAAAGCAG TCAAAGTTGTTTGAG TERM 216 195150 - 195125 - H 86 -8.3 -4.81249 | opp_overlap 195125 TTTTAAATTTAAAAA CCTAACCAGCC GGTT AACTGGTCAGG TTTAAACAAGGGAGG TERM 217 195187 - 195164 - H 86 -12.5 -2.71101 | overlap 195161 GGTTTAAACAAGGGA GGGCACCTA AGAAGA TAGGTGCCC AGGAGATTTATGAAA TERM 218 195234 - 195251 + H 70 -4.1 -4.69464 | overlap 195235 AAACCTATTCTCCCA ACGGTTT AGGT AAACCGC TTTTTAGGATGTTTT SPy_0219 196574 - 196678 + | hypothetical protein TERM 219 196740 - 196723 - f 74 -3.5 -5.2112 | gap 1, opp_overlap 196723 196727, overlap 196727 AAGATGATGAAAAAA GAGATTCT CAA AGAA-CTC TTCTAGTCTTTACGA SPy_0223 196863 - 197564 + | hypothetical protein TERM 220 197675 - 197618 - T 100 -17 -2.88023 | gap 3, opp_overlap 197622 197623 197637, overlap 197620 197637 CTAGTAGGATGAAAT GACTTAAAAACCATAAAAATAAGGAGGGA TTT TCCCTCCTTATTTTTATGGTTTT---GTC TTCTCTAGTGCTTTG TERM 221 197676 - 197620 - T 100 -15.5 -2.98761 | opp_overlap 197622 197623 197637, overlap 197618 197637 AGTAGGATGAAATGA CTTAAAAACCATAAAAATAAGGAGGGA TTT TCCCTCCTTATTTTTATGGTTTTGTCT TCTCTAGTGCTTTGC TERM 222 197622 - 197675 + T 100 -20.9 -3.58802 | gap 1, opp_overlap 197618 197620 197637, overlap 197623 197637 TAGGATGAAATGACT TA-AAAACCATAAAAATAAGGAGGGA TTT TCCCTCCTTATTTTTATGGTTTTGTC TTCTCTAGTGCTTTG TERM 223 197623 - 197673 + T 100 -26 -3.36018 | opp_overlap 197618 197620 197637, overlap 197622 197637 AGGATGAAATGACTT AAAAACCATAAAAATAAGGAGGGA TTT TCCCTCCTTATTTTTATGGTTTTG TCTTCTCTAGTGCTT TERM 224 197659 - 197637 - T 100 -15 -5.1286 | opp_overlap 197623 197622 197637, overlap 197618 197620 TAAAAACCATAAAAA TAAGGAGGGA TTT TCCCTCCTTA TTTTTATGGTTTTGT TERM 225 197637 - 197659 + T 100 -15 -5.10601 | opp_overlap 197637 197618 197620, overlap 197623 197622 TAAAAACCATAAAAA TAAGGAGGGA TTT TCCCTCCTTA TTTTTATGGTTTTGT hasC.2 198562 - 197663 - | putative UDP-glucose pyrophosphorylase TERM 226 197710 - 197735 + g 72 -9.1 -3.35046 | overlap 197708 GTTGGATGATGTAGG CTTTCAAGTCA TCTT TGACTTGAGGG TGTTTCAGGGCATAA TERM 227 197834 - 197822 - G 73 -7.7 -3.80862 | opp_overlap 197822 AAACTCACGAGCAAA GACAC GCT GTGTC TTATTGAGGGTATCA TERM 228 197822 - 197834 + g 70 -7.7 -3.64487 | opp_overlap 197822 AAACTCACGAGCAAA GACAC GCT GTGTC TTATTGAGGGTATCA TERM 229 197877 - 197887 + g 76 -6.8 -4.36508 | AGTTGAACTTCATTG CCTG CAC CAGG TTCTTGTTTTTCTAA TERM 230 198072 - 198099 + g 77 -7.8 -4.27441 | gap 1 TCCTCGTGAGGAACC CTCATGACGGCAA TAG TTGCAG-CATGAG TTTCTTCATAGTCAT gpsA 199611 - 198595 - | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase TERM 231 199769 - 199783 + H 71 -5.6 -4.57543 | CAGGTGAGCTGTTGT CATGGC TTT GCCCTG TTCTTTTTAGTTATT SPy_0227 199909 - 200118 + | hypothetical protein SPy_0228 200127 - 200360 + | hypothetical protein SPy_0229 200353 - 202059 + | putative ABC transporter, ATP-binding protein SPy_0230 202062 - 203846 + | putative ABC transporter ATP-binding protein TERM 232 203857 - 203874 + F 90 -8.4 -5.14563 | AATAGATGGCATCAG CTCCGC GTCTTA GCGGAG TTTTTTGGTGAACAA TERM 233 204551 - 204529 - g 79 -4.8 -5.08601 | TGATTTCAAGAAAAA CAACGGTTAT CGC AGATCCGTTG AAATGTGTGAGGAGT SPy_0233 203963 - 204730 + | hypothetical protein TERM 234 204745 - 204767 + F 72 -2.6 -5.31545 | ATGGCATGATTAAAA GTGGTCCGTT TAA AGTTGACCGC TTTTTTGCTATTCTT TERM 235 204863 - 204875 + G 73 -7.7 -3.80841 | AATTCGTGGTTTCGA GCTTG TTT CAAGC TTTACTAATCCTGAT dut 204840 - 205286 + | deoxyuridine 5'-triphosphate nucleotidohydrolase TERM 236 205315 - 205341 + F 73 -8.8 -3.31726 | opp_overlap 205303, overlap 205319 AAATGCTTATGACAG CAGACCTATTCT TTA AGAGTGGGTTTG TCTTGTATAGGGGAG TERM 237 205319 - 205337 + F 72 -6 -4.31164 | overlap 205315 GCTTATGACAGCAGA CCTATTCT TTA AGAGTGGG TTTGTCTTGTATAGG TERM 238 206654 - 206641 - g 79 -6.7 -4.57569 | opp_overlap 206641 CTATGCTCCTAAAAA TGCCT TGCA AGGCA TTGATATCCCTCAAG sms 205367 - 206728 + | DNA repair protein RadA SPy_0237 206917 - 207414 + | hypothetical protein TERM 239 207432 - 207447 + F 100 -9 -5.93252 | AGTAGCCAAGTTGTA GAGCTG AATT CAGCTC TTTTTTATTTTTAAA SPy_0238 207560 - 208255 + | hypothetical protein TERM 240 208272 - 208289 + F 82 -4.1 -5.44119 | opp_overlap 208272 208267 CAAAATAACATAAAA TCAGCTT TTTA GGGCTGA TTTTTTTCGCCTAAG gltX 208437 - 209882 + | glutamyl-tRNA synthetase TERM 241 209945 - 209968 + F 86 -6.1 -5.39755 | opp_overlap 209945 209948 GTCACGACAACGAAA GATTGAAGA TTAAGT TCTTCAGTC TTTTTTATCGTTATC TERM 242 210748 - 210766 + G 81 -6.8 -4.70353 | TCGCATAATTTCTAT CAAACATT GCT GATGTTTG TTTTGGTTTATTATG SPy_0242 210277 - 211623 + | histidine kinase TERM 243 211766 - 211776 + G 70 -5.4 -4.4078 | opp_overlap 211773 TGCTAATATGATATT TGAC AAA GTCA TTTTGATTGACCAAC SPy_0244 211620 - 212903 + | putative histidine kinase SPy_0245 212907 - 213647 + | putative response regulator TERM 244 213703 - 213682 - f 77 -5.9 -4.77036 | opp_overlap 213682 213680 TTTTAGGACGAAAAA GCAACATTT CAGG AAATGATGC TCTTATTGAAACATT TERM 245 213871 - 213861 - f 71 -5.4 -4.52589 | opp_overlap 213854 213861 GCTCGGCAGACAAAA TGAC GAT GTCA GTTGTCTTTGTTTGG TERM 246 213923 - 213936 + F 100 -9.5 -5.1675 | opp_overlap 213923 213922 AAATCAGTATTAAAG CCCGG CTTG CCGGG TTTTTTGATAGGTAA TERM 247 213936 - 213923 - f 73 -9.5 -2.89138 | opp_overlap 213923, overlap 213922 AAATCAGTATTAAAG CCCGG CTTG CCGGG TTTTTTGATAGGTAA rnpA 214187 - 214546 + | ribonuclease P TERM 248 214897 - 214881 - gf 73 -2.2 -5.24129 | GCCCTTTACAAAAAA TATGGG GTTAA CCCTTA TGCTAGTCTCTTACC SPy_0247 214512 - 215339 + | hypothetical protein TERM 249 215941 - 215931 - g 70 -8.2 -3.7108 | ATTTGCAGATTGAAA CGCC AGA GGCG GGACGTGTGATTGGT SPy_0248 215351 - 216265 + | hypothetical protein TERM 250 216279 - 216307 + F 90 -8.3 -5.36441 | AGATCCTAAAAAGAA TCTTTGGTAGTTA GTT TAGCTATCGAAGA TTTTTTGTATGGCCA rpmH 216580 - 216714 + | 50S ribosomal protein L34 TERM 251 216740 - 216762 + F 79 -5.6 -5.15117 | opp_overlap 216740 TACAACTAAAGTAAA CCAAGAGT GCTCGAG GCTCTTGG TTTTTTAACGTTTTC TERM 252 217024 - 217014 - g 85 -6.8 -5.00851 | ACCAACCAAAGAAAA GCTC ATG GAGC AGTTAAAGGGTGGGA SPy_0251 216988 - 217692 + | N-acetylmannosamine-6-phosphate 2-epimerase TERM 253 218815 - 218843 + G 71 -7.5 -3.80174 | opp_overlap 218812, overlap 218829 218831 GGACCTAAAAATGTT GTTCGTACAGG TGCTTTC CCTGTAAGAAC TTCTTATGGGGATCT TERM 254 218831 - 218855 + G 77 -10.1 -3.34398 | opp_overlap 218812, overlap 218815 218829 TTCGTACAGGTGCTT TCCCTGTAAGA ACT TCTTATGGGGA TCTTTACAAAGACAA SPy_0252 217741 - 219060 + | N-acetylneuraminate-binding protein TERM 255 219077 - 219119 + F 89 -7.1 -5.26119 | opp_overlap 219118, overlap 219110 TGTTCCTAACAAGTG GCTTCTTTTCAATGCACAT GTCAA ATGGTCACTGGAAAGAAGC TTTTCTTTTTAGAAA TERM 256 219110 - 219124 + G 71 -5 -4.58283 | opp_overlap 219118 219119, overlap 219077 TGTCAAATGGTCACT GGAAAG AAG CTTTTC TTTTTAGAAAAGTTG TERM 257 219204 - 219185 - g 81 -5.8 -5.09521 | gap 1, opp_overlap 219185 TCAATAAATTAAAAA TGAGA-GAG ACG CTCATCTCA TACGCTTTCTTAGCT TERM 258 219555 - 219541 - g 72 -8.6 -3.53091 | ACGGTGGTTTGGAAA TGGATC TAT GATCCA ATGTCAGGGATTTTG SPy_0254 219088 - 220050 + | N-acetylneuraminate transport system permease protein SPy_0255 220063 - 220893 + | N-acetylneuraminate transport system permease protein SPy_0256 221050 - 221712 + | hypothetical protein nanH 221724 - 222638 + | N-acetylneuraminate lyase SPy_0258 222660 - 223598 + | putative glucose kinase TERM 259 223726 - 223680 - T 82 -7.4 -4.58663 | opp_overlap 223680 223688 ACGACCCTTTAAAAA GAAAACAACGCCCTTTTTGCTA TTG TAGTCTAAAGGTCGTTATTTTC TTTGTCAATAATAGT TERM 260 223680 - 223726 + T 76 -7.4 -3.93963 | opp_overlap 223680, overlap 223688 ACGACCCTTTAAAAA GAAAACAACGCCCTTTTTGCTA TTG TAGTCTAAAGGTCGTTATTTTC TTTGTCAATAATAGT SPy_0259 224539 - 223709 - | hypothetical protein TERM 261 225413 - 225393 - g 87 -8.3 -4.59773 | overlap 225395 225411 GGTCACTTTCAAAAA GGCTCTTGA TAT TCAAGAGGC AGCGCAGCACTTGCC TERM 262 225411 - 225395 - g 70 -9.5 -2.61004 | overlap 225393 TCACTTTCAAAAAGG CTCTTGA TAT TCAAGAG GCAGCGCAGCACTTG SPy_0260 224791 - 225615 + | hypothetical protein SPy_0261 225608 - 226177 + | hypothetical protein ksgA 226291 - 227163 + | dimethyladenosine transferase TERM 263 227406 - 227417 + F 73 -4.4 -4.90266 | opp_overlap 227406 TACCTCAAAAAATCA TCAG TGAT CTGA TTTTTAGTTGATAAA SPy_0263 227587 - 228459 + | ribosome-associated GTPase TERM 264 228953 - 228937 - g 77 -5.1 -4.8543 | overlap 228938 GAATGTTTAGAAAAA GTGGCTA CCG TAGCCAA ATGGCGAGATGAAAA TERM 265 228952 - 228938 - g 72 -8.6 -3.50535 | overlap 228937 AATGTTTAGAAAAAG TGGCTA CCG TAGCCA AATGGCGAGATGAAA rpe 228469 - 229131 + | ribulose-phosphate 3-epimerase TERM 266 229205 - 229236 + G 83 -11 -3.72141 | opp_overlap 229205 GTCGGTATTGATAGA GGGAGCCTATTTTT ATTA GAAAATGGGCTTCC TTTGAATATGGCTGT SPy_0265 229124 - 229756 + | hypothetical protein TERM 267 230071 - 230056 - g 78 -4 -5.25803 | AACGCTTAGAAAAAA TTAACC AGCA GGTCAA CCAATCGCTCAAAAA TERM 268 230808 - 230792 - g 82 -3.7 -5.52909 | overlap 230794 TAATATCCAAAAAAA TGCTGAT GAC ATCAGTA AAATTTTAGGCAATG SPy_0266 229758 - 231029 + | hypothetical protein TERM 269 231293 - 231266 - g 73 -7.8 -3.91911 | gap 1 CTCAGGTTAATCAAA TCACCT-TGCGAA ATG TTCGCCCAGGTGA GCCCAATGATCCAAA cbf 231019 - 231957 + | CMP-binding factor TERM 270 232015 - 232037 + F 100 -9.3 -4.77216 | opp_overlap 232017 TTTTGATGTGCTTAA CACTTATGA TGGTT TCATAAGTG TTTTTGGCTCTTGTT TERM 271 232942 - 232928 - g 78 -7.1 -4.36914 | TGTGTTTGCAGAAAA CGCTC AATCA GAGCG TGAGCAAATGACCTT TERM 272 233007 - 232997 - g 73 -5.4 -4.62783 | opp_overlap 232997, overlap 232984 GATTGATGTCAAAAA CAAC AAT GTTG TTGTAGAAGTTGGTA purR 232224 - 233063 + | purine operon repressor prgA 233054 - 235675 + | putative surface exclusion protein TERM 273 235727 - 235757 + F 76 -4.1 -5.1166 | gap 1 TCTATTTGACATGAA GTGCCGTCT-GTGT TATT ATATTAGACGGTAC TTTTTACTTTTGGTC rpsL 235883 - 236296 + | 30S ribosomal protein S12 rpsG 236317 - 236787 + | 30S ribosomal protein S7 TERM 274 237078 - 237098 + F 100 -9.7 -4.75372 | opp_overlap 237078 CAAATATTTAGATAA CGGGTAGGT CCT GCCTATCCG TTTTTGCTAAATAGT TERM 275 237731 - 237707 - g 77 -8 -4.16443 | opp_overlap 237707 237705 AGATGAAAGCAGAAA TCTATACCAA CGACC TTGGTACAGA TATTCTTGAAGAAGA fus 237154 - 239232 + | elongation factor G TERM 276 239237 - 239224 - f 76 -4.5 -5.06961 | overlap 239233 239236 ATTAAGAAAAACAAA GGTGA ATAA CCACC ACTAAGAGGTTGAGG TERM 277 239243 - 239269 + F 95 -8.9 -5.21709 | gap 1, opp_overlap 239236 239233 239243 AATAACCACCACTAA GAGGTTGAGGAT AACT ATCCT-AACCTC TTTTTTAGTGTAACA TERM 278 239269 - 239243 - f 73 -8.9 -3.2613 | gap 1, opp_overlap 239243, overlap 239236 239233 AATAACCACCACTAA GAGGTTGAGGAT AACT ATCCT-AACCTC TTTTTTAGTGTAACA TERM 279 239374 - 239363 - f 77 -3 -5.48787 | opp_overlap 239363, overlap 239354 AGAACATAGAAAAAA GAAA GCCC TTTC CTATATTTGGTGGGT plr 239580 - 240590 + | glyceraldehyde-3-phosphate dehydrogenase TERM 280 240772 - 240746 - T 70 -3.8 -4.98522 | opp_overlap 240746 AACTGTATACAAAAA GGCTAAGA TGGAAGGGGTG TCTTAGCC TTTTTTTGTCTGACT TERM 281 240746 - 240772 + T 86 -5.2 -5.72616 | opp_overlap 240746 AACTGTATACAAAAA GGCTAAGATG GAAGGGG TGTCTTAGCC TTTTTTTGTCTGACT TERM 282 240905 - 240919 + T 82 -5.7 -5.26918 | TCAGTCTTCTGTAAG CTGAC GATAA GTCAG TTTTTTCTGCCATAT SPy_0276 241814 - 241074 - | putative amino acid ABC transporter ATP-binding protein TERM 283 241358 - 241373 + g 73 -5.4 -4.57569 | CAGATAAGGCTCTGG CAATGG CAAC CCGTTG TTTTTGCCCCCCTGA SPy_0277 243375 - 241807 - | putative glutamine-binding periplasmic protein TERM 284 243355 - 243367 + g 80 -6.3 -4.81551 | opp_overlap 243353 243355 CAAGGCGACCAAACA GCTAA GGA TTAGC TTTTTCATATAGGTC TERM 285 244319 - 244339 + G 71 -3.9 -5.00196 | opp_overlap 244321, overlap 244310 244323 GCTATTTGGCAAAGT CATTCCTCT GGT AGAGGTAGG TTTTCTTCTTTGGCA SPy_0278 243573 - 245471 + | hypothetical protein uppP 245537 - 246376 + | undecaprenyl pyrophosphate phosphatase TERM 286 246400 - 246423 + F 100 -12.4 -4.83759 | ATCGTTTAGGATGTT GCGACAGACC TTGG GGACTGTCGC TTTTTAAATTTCCTT TERM 287 246555 - 246538 - g 73 -5.6 -4.62772 | TGGAAATGAAACAAA TTAGCG AGACAA CGCTAA AAATAACAATTAGTA TERM 288 246651 - 246631 - g 82 -4 -5.4505 | TTCCTCAAGAAAAAA CAGAAGAG TTTTT CTATTCTG TGATGGACGAACTCG mecA 246522 - 247283 + | adaptor protein TERM 289 247922 - 247937 + G 85 -5.4 -5.33848 | overlap 247924 CATTTTGGTCTTGAT TTCTGC TATT GCAGGA TTTTTTCCTTATAAT rgpG 247290 - 248459 + | hypothetical protein SPy_0285 248581 - 249351 + | putative ABC transporter ATP-binding protein SPy_0287 249446 - 250708 + | hypothetical protein TERM 290 250953 - 250969 + G 71 -6.5 -4.2704 | AATATGAGGCCAGTC GCCAGCA GGT TGCTGAC TTTATTCATGCTAAA SPy_0288 250739 - 251965 + | putative aminotransferase SPy_0289 251952 - 252431 + | NifU protein SPy_0290 252424 - 253842 + | hypothetical protein TERM 291 253902 - 253919 + T 77 -5.6 -4.90013 | TTATGAGTTGTAGTA CTAACC CCAAGT GGTTAG TTTTTAGTTGCCTTG TERM 292 253946 - 253993 + T 77 -8.7 -3.65224 | opp_overlap 253949 253951 253960, overlap 253950 253951 253953 253960 CTTGAACACGTAAGA TAACATATCAAAAACCTCTGT GCTTTG ACAGAGGTTTTTGATAATTCA TTATTGGCGTCCCAT TERM 293 253990 - 253949 - T 87 -10.4 -3.71517 | opp_overlap 253946 253950 253951 253953 253960, overlap 253951 253960 GAACACGTAAGATAA CATATCAAAAACCTCTGT GCTTTG ACAGAGGTTTTTGATAAT TCATTATTGGCGTCC TERM 294 253950 - 253989 + T 100 -13.9 -3.54158 | opp_overlap 253949 253951 253960, overlap 253946 253951 253953 253960 AACACGTAAGATAAC ATATCAAAAACCTCTGT GCTTTG ACAGAGGTTTTTGATAA TTCATTATTGGCGTC TERM 295 253951 - 253988 + T 100 -17.4 -2.72013 | opp_overlap 253949 253951 253960, overlap 253950 253946 253953 253960 ACACGTAAGATAACA TATCAAAAACCTCTGT GCTTTG ACAGAGGTTTTTGATA ATTCATTATTGGCGT TERM 296 253988 - 253951 - T 100 -17.4 -3.42884 | opp_overlap 253951 253950 253946 253953 253960, overlap 253949 253960 ACACGTAAGATAACA TATCAAAAACCTCTGT GCTTTG ACAGAGGTTTTTGATA ATTCATTATTGGCGT TERM 297 253953 - 253986 + T 100 -15.6 -2.89971 | opp_overlap 253951 253949 253960, overlap 253951 253950 253946 253960 ACGTAAGATAACATA TCAAAAACCTCTGT GCTTTG ACAGAGGTTTTTGA TAATTCATTATTGGC TERM 298 253960 - 253979 + T 83 -7.9 -4.81685 | opp_overlap 253951 253949 253960, overlap 253953 253951 253950 253946 ATAACATATCAAAAA CCTCTGT GCTTTG ACAGAGG TTTTTGATAATTCAT TERM 299 253979 - 253960 - T 88 -7.9 -4.88711 | opp_overlap 253960 253953 253951 253950 253946, overlap 253951 253949 ATAACATATCAAAAA CCTCTGT GCTTTG ACAGAGG TTTTTGATAATTCAT TERM 300 255314 - 255291 - T 85 -6.8 -5.24003 | gap 1 AATAAAAATGAAAAA GACTG-CAGAA GTA CTCTGTCAGTC AATGTCATACAAAAA TERM 301 255367 - 255350 - T 79 -8.5 -3.89346 | GTGTTATTCTATAAA GAGGTAT TGAC ATACCTC ACAAAACGGTTCCAC dacA 256575 - 255343 - | penicillin-binding protein (D-alanyl-D-alanine carboxypeptidase) TERM 302 256216 - 256200 - G 71 -9.5 -2.78679 | opp_overlap 256199 256198, overlap 256199 TTTTTTCAGCTAAAG CAATAGC GGG GCTATTG GCGTTATTAACAACT TERM 303 258343 - 258357 + H 76 -10 -2.78384 | opp_overlap 258342 258334 GAAACATCAACTCAC GAAGCC CAA GGCTTC TATGCTGAGACCCCA TERM 304 258931 - 258879 - H 79 -4.4 -5.26119 | gap 1, opp_overlap 258883 258883 258891, overlap 258882 258883 CGTTGAAAAATAAAA CGAT-GTTCAAAAGAACTTTCTC GTTTATGT GAGGGAGTTCTTTTGAACTATTG AGGACAACTATGAAA TERM 305 258926 - 258883 - H 75 -9.8 -2.64578 | opp_overlap 258883 258883 258891, overlap 258882 258879 GAAAAATAAAACGAT GTTCAAAAGAACTTTCTC GTTTATGT GAGGGAGTTCTTTTGAAC TATTGAGGACAACTA TERM 306 258883 - 258926 + H 100 -15.6 -3.01924 | opp_overlap 258882 258879 258883, overlap 258883 258891 GAAAAATAAAACGAT GTTCAAAAGAACTTTCTCGT TTAT GTGAGGGAGTTCTTTTGAAC TATTGAGGACAACTA TERM 307 259704 - 259690 - g 74 -4.3 -4.87665 | opp_overlap 259690, overlap 259697 CCGTAGCTACAAAAA TCCAA AATCA TTGGA TGATATCACCAAGGT oppB 258941 - 260443 + | oligopeptidepermease oppC 260443 - 261369 + | oligopeptidepermease oppD 261378 - 262448 + | oligopeptidepermease ATP-binding protein TERM 308 262496 - 262478 - g 86 -10.4 -4.01564 | TAAAAGACCTAGAAA TTTCCTTC GGA GAAGGAAA GAAAAAATTTGTTGC oppF 262441 - 263364 + | oligopeptidepermease TERM 309 263433 - 263443 + F 83 -6.8 -4.83677 | overlap 263412 GTTTTGTATTGTAGA GGAC TAA GTCC TTTTAGTTTTATTTT TERM 310 263555 - 263570 + F 89 -3.3 -5.86465 | AGAACTCGTCTTTGT CCATT TTTTAT AATGG TTTTTTTGTCTTCTT TERM 311 263610 - 263622 + F 77 -3.3 -5.47218 | opp_overlap 263610 GATGCTTCTTTCAAA CGGAG TTC CTCGG TTTTTTTAAGTAAGC TERM 312 263752 - 263762 + F 82 -5.4 -5.31072 | CTCTTGTTTTCTCAA CAGT ATA ACTG TTTTTCTTATATTGT TERM 313 264001 - 263962 - f 100 -9.4 -5.27923 | opp_overlap 263964 263971, overlap 263964 TAATTTCATAAAAAA TACCCCGAACGTTAGA TTTTTTTG TCTAACGTTTGGGGTG TAGTTCAAGGCTTTT TERM 314 263964 - 263999 + F 95 -14.9 -2.90571 | opp_overlap 263962 263964, overlap 263971 ATTTCATAAAAAATA CCCCGAACGTTAGAT TTTTTT GTCTAACGTTTGGGG TGTAGTTCAAGGCTT TERM 315 263999 - 263964 - f 100 -12 -4.26475 | opp_overlap 263964 263971, overlap 263962 ATTTCATAAAAAATA CCCCGAACGTTAGA TTTTTTTG TCTAACGTTTGGGG TGTAGTTCAAGGCTT TERM 316 264325 - 264311 - f 93 -8.6 -4.65032 | GAAACGAGAAATAAA TCTGTC AGC GACAGA AGGAACGAGTAAGTT TERM 317 266589 - 266610 + F 75 -10.1 -2.58544 | opp_overlap 266590, overlap 266588 ACGGCAGGAGGGCAA ACCGAGGAG TTTA CTCCTCGGG GTTGTAGGACTGCGA TERM 318 266609 - 266590 - f 100 -13.6 -3.62096 | opp_overlap 266589 266588 CGGCAGGAGGGCAAA CCGAGGAG TTTA CTCCTCGG GGTTGTAGGACTGCG TERM 319 269516 - 269533 + F 89 -6.3 -5.61824 | opp_overlap 269516, overlap 269507 GGCGGAGTAGAGAGA GGTAGGA AGCG TCCTATC TTTTTTTGCATTTTA TERM 320 269696 - 269673 - f 100 -14 -5.68023 | opp_overlap 269673 GCATAATGAAAAAAA CAACAGGACA TTAA TGTCCTGTTG TTTTTTTGTGGTTCT TERM 321 269673 - 269696 + F 100 -14 -5.73339 | opp_overlap 269673 GCATAATGAAAAAAA CAACAGGACA TTAA TGTCCTGTTG TTTTTTTGTGGTTCT comX1.1 269686 - 270237 + | putative competence protein TERM 322 270535 - 270562 + F 100 -12.2 -5.04597 | AATCATTTGTGATTA TCTTATCAGGAG TTGA CTCTTGATAAGA TTTTTGTATATCAGT SPy_0303 270848 - 271981 + | IS1548 transposase SPy_0305 272087 - 272671 + | hypothetical protein TERM 323 272747 - 272731 - g 87 -5.1 -5.4659 | GAAGATAAAGAAAAA GCTGG TTTTACG CCAGC TGCTGCTTTGAAAAA SPy_0306 272671 - 273789 + | GTP-binding protein YqeH TERM 324 273830 - 273815 - g 78 -2.6 -5.43866 | GAAGTTGGAAAAAAA TGCTTA CAAG TAAACA AAGAGCTTTCTTAAA SPy_0307 273814 - 274122 + | hypothetical protein nadD 274191 - 274823 + | nicotinic acid mononucleotide adenylyltransferase TERM 325 275286 - 275274 - g 70 -3.3 -4.86001 | opp_overlap 275274 ATGACGCTAGAAAAA TCGCG AAG CTCGA TTTGAATCAGGCTGT SPy_0309 274820 - 275413 + | hypothetical protein TERM 326 275686 - 275701 + G 82 -4 -5.40072 | TTGCTTGATTTGACC GATGTG GTGG TACATC TTTTTTTAGAAGACG SPy_0310 275413 - 275790 + | iojap protein family TERM 327 275804 - 275822 + G 79 -6.7 -4.60487 | opp_overlap 275802 275804 AATGTTACAAAGAGA CCTTGTC AATAC GACAGGG TTTTTGAGGATGATA TERM 328 276547 - 276560 + G 80 -4.5 -5.26918 | opp_overlap 276547 AGGAGCCAACTAAGA CCAGC AAGC GTTGG TTTTTTGTAGCATAT SPy_0312 275790 - 276581 + | hypothetical protein TERM 329 277247 - 277235 - g 76 -3.4 -5.28176 | GCTATCCACAAAAAA CACA AAAAA TGTG GGAAATCTTTGCTGG SPy_0314 276835 - 277941 + | hypothetical protein TERM 330 277936 - 277926 - f 84 -5.4 -5.58179 | opp_overlap 277933 TATTATAATAAAAAA TGAG AGG CTCA ATTAAACTCTAATTG TERM 331 277933 - 277953 + F 93 -7 -5.41746 | opp_overlap 277926 ATAAAAAATGAGAGG CTCAATTA AACTC TAATTGAG TTTTTTTGGGGGCTT SPy_0315 278293 - 278433 + | hypothetical protein SPy_0316 278423 - 279139 + | hypothetical protein TERM 332 279161 - 279182 + F 86 -8.1 -4.68994 | opp_overlap 279161 ATAGAATAATAAAAA GAGTTGAAA TCTA TTTCAGCTC TTTTTAAGTGATGCT TERM 333 279182 - 279161 - f 84 -5.9 -5.35721 | opp_overlap 279161 ATAGAATAATAAAAA GAGTTGAAA TCTA TTTCAGCTC TTTTTAAGTGATGCT TERM 334 279381 - 279367 - g 75 -10 -3.20207 | AACAGTATTTAGGAA GGGCAA CAA TTGCCC TAGCATCGACCCTTG SPy_0317 279342 - 280184 + | ABC transporter substrate-binding protein TERM 335 280910 - 280900 - g 70 -5.4 -4.3453 | overlap 280896 AAGGCTAAATACAAA TCAG TAG CTGA TCTGCCAAATGGTAC SPy_0319 280513 - 281358 + | ABC transporter substrate-binding protein SPy_0320 281608 - 282672 + | ABC transporter ATP-binding protein SPy_0321 282704 - 283366 + | ABC transporter permease TERM 336 283405 - 283368 - T 100 -10.2 -4.57482 | gap 2, opp_overlap 283373 283376, overlap 283373 TTAGTCATAAATAAA CGAAACAACACCCTAAGT AAAA ACTTAGGGTGTTGTT--G TTTAGATGATGTCAT TERM 337 283402 - 283373 - T 100 -18.1 -4.29621 | opp_overlap 283373 283376, overlap 283368 CATAAATAAACGAAA CAACACCCTAAGT AAAA ACTTAGGGTGTTG TTGTTTAGATGATGT TERM 338 283373 - 283402 + T 100 -18.1 -3.98075 | opp_overlap 283373 283368, overlap 283376 CATAAATAAACGAAA CAACACCCTAAGT AAAA ACTTAGGGTGTTG TTGTTTAGATGATGT TERM 339 283376 - 283399 + T 100 -14 -4.10744 | opp_overlap 283373 283368, overlap 283373 AAATAAACGAAACAA CACCCTAAGT AAAA ACTTAGGGTG TTGTTGTTTAGATGA braB 284790 - 283420 - | putative branched-chain amino acid transport protein SPy_0324 285024 - 286238 + | serine/threonine transporter SstT TERM 340 286284 - 286261 - T 100 -11.1 -5.27399 | opp_overlap 286261 TAACATAGTAAAAAA CATCCTTGG AAAACG CCAAGGATG TTTTTTTATTATTTA TERM 341 286261 - 286284 + T 100 -11.1 -6.01369 | opp_overlap 286261 TAACATAGTAAAAAA CATCCTTGG AAAACG CCAAGGATG TTTTTTTATTATTTA SPy_0326 286967 - 286293 - | hypothetical protein ntpJ 288368 - 286977 - | putative V-type Na+ -ATPase subunit J TERM 342 287849 - 287830 - G 71 -6.4 -4.17089 | overlap 287831 287833 287845 CCTAAATTGTCAAAA CCAGCGTT ACAA AACGCCGA CACAGCTAAAAAAAT TERM 343 288424 - 288407 - R 82 -5.6 -5.23016 | opp_overlap 288407 288406 AAATAAGTTAAAAAA GCTAAG TTTCAT CTTAGC CTTTGGTACTATTTT gidB 289151 - 288438 - | glucose-inhibited division protein B TERM 344 288995 - 289008 + g 84 -6.7 -4.85918 | AATCATAAAAATGCT TGAGG TAAA CCTCA TTTTCTTCTGTAATA TERM 345 289667 - 289648 - g 74 -6.5 -4.48175 | AAAAGCTAACGAAAA CTTCTTG AAATTA CAAGAAG AGTTGACCAATACGG lemA 289301 - 289858 + | putative cytoplasmic membrane protein TERM 346 290276 - 290261 - g 83 -9 -4.09864 | opp_overlap 290262 290263, overlap 290262 ATCTAGCCCTCAAAA TGCTGC TGTT GCAGCA ACGACAGGTTTACTT htpX 289905 - 290801 + | heat shock protein HtpX TERM 347 290798 - 290829 + F 79 -3.8 -5.51046 | gap 1 AAGGTTAAAAAACAT GTGAGCGTTTGGG GTTTTTG CTCAAGC-CTCAC TTTTTTATGTCTTTG TERM 348 291540 - 291517 - g 83 -6.1 -5.093 | opp_overlap 291517 291534 TCTAAAAGAAGAAAA GCAAAAAGA AAATAA TCCTTTTGC TAGCTTGCAAGGGTT SPy_0334 291032 - 291568 + | hypothetical protein TERM 349 291885 - 291870 - f 72 -6.2 -4.43681 | opp_overlap 291869 291865 291870 TATTGAAGATGAAAA GAATCT GGCT AGATTC GTTTCTCTTGAGCTG TERM 350 292708 - 292738 + G 82 -8.4 -4.27316 | AAGCTGTAAATATTG TTAGAGTTCGTCTT TCT GAGGTGGACTCTAA TTTTACATTAGAGAA csrS 292527 - 294029 + | putative sensory transduction histidine kinase SPy_0338 294244 - 294738 + | transcriptional regulator NrdR SPy_0339 294722 - 295897 + | hypothetical protein TERM 351 296507 - 296491 - g 70 -2.9 -5.09895 | opp_overlap 296492, overlap 296492 CATTGATGTAAAAAA TGCCATT TCA AACGGCT CTGTTAAAGAAGAAA dnaI 295898 - 296800 + | primosomal protein DnaI engA 296863 - 298173 + | GTP-binding protein EngA TERM 352 298227 - 298259 + F 95 -8.5 -4.92783 | opp_overlap 298227 TCTCATCATTGATAA GGACTGTGTTGTGTA TGT TACAGGAGACAGTCC TTTTTATAATACCTT snf 298380 - 301478 + | putative SNF helicase SPy_0343 301721 - 302323 + | hypothetical protein murC 302363 - 303691 + | UDP-N-acetylmuramate--L-alanine ligase TERM 353 303697 - 303711 + F 100 -11.4 -4.58466 | opp_overlap 303695 TAACCAATAACATGT CCTGCC TTA GGCAGG TTTTCTCATTCTAAA SPy_0346 303737 - 304219 + | putative arylalkylamine n-acetyltransferase TERM 354 305242 - 305225 - g 76 -3.5 -5.32699 | opp_overlap 305234 GGAAAGACCAAAAAA GCTAAAA CACC TTTTAAC GAGAAGGATTTTTTG TERM 355 305873 - 305850 - g 81 -6.8 -4.68593 | opp_overlap 305852 TTTACTATGCAAAAA CATTTGAAGA ACAC TCTGCAAATG TTGAAAAATATGTGA SPy_0348 304331 - 305905 + | putative aminodeoxychorismate lyase TERM 356 305899 - 305945 + F 100 -23.5 -3.33696 | gap 1, opp_overlap 305899 305907 305913, overlap 305907 305913 TGTGAATAGTCAAAT TCAGTAAACACAAACATGGTGC TTAA GCACCATGTTTGTGTTT-CTGA TTCGTTCAAAAAAGA TERM 357 305945 - 305899 - f 100 -23.5 -2.85503 | gap 1, opp_overlap 305899 305907 305913, overlap 305907 305913 TGTGAATAGTCAAAT TCAGTAAACACAAACATGGTGC TTAA GCACCATGTTTGTGTTT-CTGA TTCGTTCAAAAAAGA TERM 358 305938 - 305907 - f 100 -20.4 -3.82097 | opp_overlap 305907 305899 305913, overlap 305899 305913 GTCAAATTCAGTAAA CACAAACATGGTGC TTAA GCACCATGTTTGTG TTTCTGATTCGTTCA TERM 359 305907 - 305938 + F 100 -20.4 -4.10331 | opp_overlap 305899 305907 305913, overlap 305899 305913 GTCAAATTCAGTAAA CACAAACATGGTGC TTAA GCACCATGTTTGTG TTTCTGATTCGTTCA TERM 360 305913 - 305932 + F 100 -12.2 -4.42513 | opp_overlap 305907 305899 305913, overlap 305907 305899 TTCAGTAAACACAAA CATGGTGC TTAA GCACCATG TTTGTGTTTCTGATT TERM 361 305932 - 305913 - f 100 -12.2 -4.36903 | opp_overlap 305913 305907 305899, overlap 305907 305899 TTCAGTAAACACAAA CATGGTGC TTAA GCACCATG TTTGTGTTTCTGATT greA 305930 - 306460 + | transcription elongation factor GreA TERM 362 306659 - 306636 - T 71 -3.1 -5.17488 | overlap 306639 AATACCAAAAGAAAA GACCAGCAC CTTAAT GTACTGACC CCAAAAAGTTGGACA TERM 363 306979 - 307026 + T 100 -15.8 -5.38951 | overlap 306980 ATCGTTAGATTTTTT TGATATGTCCCCTTTCACTAGA TGAG TCCAGTAAAAGGGGGCATATCG TTTTTTGTCTAACTT TERM 364 306980 - 307025 + T 100 -17.1 -3.81744 | overlap 306979 TCGTTAGATTTTTTT GATATGTCCCCTTTCACTAGA TGAG TCCAGTAAAAGGGGGCATATC GTTTTTTGTCTAACT SPy_0351 308006 - 307083 - | OxaA-like protein precursor SPy_0352 308366 - 308088 - | putative acylphosphatase SPy_0356 309941 - 310678 + | 23S rRNA methyltransferase SPy_0357 310717 - 311217 + | hypothetical protein SPy_0358 311232 - 311921 + | hypothetical protein TERM 365 311963 - 311915 - f 100 -18.8 -4.1552 | gap 1, opp_overlap 311924 311931, overlap 311918 311931 TATTTTTGGAAGAAA TGATTAACATTAAAAAGTGAGTA TAAC TACTCACTTTTTAATGTTAA-CA GGATAAGTAAACTGT TERM 366 311961 - 311918 - f 100 -21.6 -3.10244 | opp_overlap 311924 311931, overlap 311915 311931 TTTTGGAAGAAATGA TTAACATTAAAAAGTGAGTA TAAC TACTCACTTTTTAATGTTAA CAGGATAAGTAAACT TERM 367 311924 - 311955 + F 95 -14.8 -3.02511 | opp_overlap 311918 311915 311931, overlap 311931 AAGAAATGATTAACA TTAAAAAGTGAGTA TAAC TACTCACTTTTTAA TGTTAACAGGATAAG TERM 368 311931 - 311948 + F 95 -8.5 -4.87626 | opp_overlap 311918 311915 311931, overlap 311924 GATTAACATTAAAAA GTGAGTA TAAC TACTCAC TTTTTAATGTTAACA TERM 369 311948 - 311931 - f 95 -8.5 -4.89233 | opp_overlap 311931 311924, overlap 311918 311915 GATTAACATTAAAAA GTGAGTA TAAC TACTCAC TTTTTAATGTTAACA SPy_0359 312099 - 312341 + | hypothetical protein TERM 370 312463 - 312486 + F 100 -11.1 -4.82667 | opp_overlap 312463 GGGTTTAAAAAGAAA CTCAGTTGG CTATTT CCAACTGAG TTTTTCATATCGTCA TERM 371 312486 - 312463 - f 100 -11.1 -4.85782 | opp_overlap 312463 GGGTTTAAAAAGAAA CTCAGTTGG CTATTT CCAACTGAG TTTTTCATATCGTCA glr 312519 - 313313 + | glutamate racemase SPy_0362 313310 - 314296 + | fused deoxyribonucleotide triphosphate pyrophosphatase/unknown domain-containing protein SPy_0363 314275 - 314796 + | putative phosphoesterase SPy_0364 314793 - 315254 + | CBS domain containing protein TERM 372 315591 - 315576 - g 72 -3.2 -5.14563 | TTTTCTATCAAAAAA CCCC TTTTGTGT GGGG GCAATTAATCAGCTT xerD 315251 - 315997 + | site-specific tyrosine recombinase XerD-like protein TERM 373 316498 - 316461 - g 70 -2.8 -5.03715 | opp_overlap 316472, overlap 316496 AGCAGTTTTAAAAAA CAACCATACAGTCATC GAGCGT GATGATTATAAGATTG AAGACATGATGGCTT scpA 315997 - 316698 + | segregation and condensation protein A scpB 316695 - 317246 + | segregation and condensation protein B SPy_0369 317369 - 318091 + | hypothetical protein SPy_0370 318091 - 318351 + | hypothetical protein SPy_0371 318529 - 319077 + | 23S rRNA methyltransferase TERM 374 319140 - 319082 - f 76 -9.9 -2.77539 | gap 1, opp_overlap 319083 319092, overlap 319092 AACTAAAATAATGGA CTTTTTAAAAGCGTCAGTTTTTGGCAAC ATGC GTTGTCAGTAGCTGACGCTTTTAAAAA- TTTAGTCAAAGCTAT TERM 375 319083 - 319140 + F 100 -22.5 -3.73402 | opp_overlap 319082 319092, overlap 319092 ACTAAAATAATGGAC TTTTTAAAAGCGTCAGTTTTTGGCAAC ATGC GTTGTCAGTAGCTGACGCTTTTAAAAA TTTAGTCAAAGCTAT TERM 376 319092 - 319131 + F 100 -14.4 -4.17491 | opp_overlap 319092 319082, overlap 319083 ATGGACTTTTTAAAA GCGTCAGTTTTTGGCAAC ATGC GTTGTCAGTAGCTGACGC TTTTAAAAATTTAGT TERM 377 319131 - 319092 - f 78 -7.8 -4.09864 | opp_overlap 319083 319092, overlap 319082 ATGGACTTTTTAAAA GCGTCAGTTTTTGGCAAC ATGC GTTGTCAGTAGCTGACGC TTTTAAAAATTTAGT TERM 378 319353 - 319380 + F 89 -7.2 -5.21709 | CAATAACGACGGAAC TTCTTTCAATTT GAAA AAATTGGAGGAA TTTTTTAATGTCAAA SPy_0373 319388 - 319951 + | hypothetical protein TERM 379 320234 - 320249 + G 70 -3.2 -4.86621 | opp_overlap 320234 GTTTATCTTGTCAAA TGGTGC CATT GCAGCA TTTTTGATTACGACT SPy_0374 319953 - 320606 + | hypothetical protein TERM 380 320642 - 320692 + F 81 -7.9 -4.43879 | opp_overlap 320648, overlap 320643 320648 GCTTATTTAAATCAT TTAGAATAACATTGGCAAGCA TCACCCCCT TGATTGCCAGTGTTATTTTAG TTTTAGTTAGATGAT TERM 381 320643 - 320691 + F 77 -9.2 -3.25604 | opp_overlap 320648, overlap 320642 320648 CTTATTTAAATCATT TAGAATAACATTGGCAAGCA TCACCCCCT TGATTGCCAGTGTTATTTTA GTTTTAGTTAGATGA TERM 382 320648 - 320686 + F 83 -6.9 -4.72729 | opp_overlap 320648, overlap 320643 320642 TTAAATCATTTAGAA TAACATTGGCAAGCA TCACCCCCT TGATTGCCAGTGTTA TTTTAGTTTTAGTTA SPy_0376 320899 - 321819 + | hypothetical protein TERM 383 321961 - 321987 + G 76 -7.4 -4.22407 | ATGGAAATGATACTG CCTTTTTGGC ACAATTA GCTAAAAAGG TTTATGCTTTTGATG TERM 384 322361 - 322375 + G 75 -2.8 -5.2112 | opp_overlap 322361 TCAGCCTCTTAATCA GGTG AATACCC CACC TTTTTTAATCATGTT SPy_0377 321858 - 322412 + | SAM-dependent methyltransferase hlyX 322545 - 323879 + | putative hemolysin TERM 385 323874 - 323894 + F 100 -11.2 -4.7254 | opp_overlap 323874 CAGATTATTGAGGAA GACTAGGC TCCAT GCCTAGTC TTTTTGATGAAAAGT TERM 386 323894 - 323874 - f 87 -11.2 -3.1994 | opp_overlap 323874 CAGATTATTGAGGAA GACTAGGC TCCAT GCCTAGTC TTTTTGATGAAAAGT TERM 387 324704 - 324694 - g 75 -5.4 -4.7416 | TCAAAATGCTAAAAA TCTG ATG CAGA CCGAATCTTACACAG pflC 323957 - 324748 + | putative pyruvate-formate lyase activating enzyme TERM 388 324762 - 324778 + F 83 -7.3 -4.67556 | AAGAGCTGTTATAGG GTTGAGG TTT CTTCAAC TTTTTAAAGTATTAT TERM 389 325289 - 325274 - g 74 -4.7 -4.87803 | TATGTTTAAAGAAAA TGGCA TCGAGG TGCCA AAAGCGATTGCAGGG SPy_0380 324879 - 325814 + | putative manganese-dependent inorganic pyrophosphatase TERM 390 325857 - 325833 - f 71 -6.5 -4.11773 | opp_overlap 325833 325847 AAAGACGCTTTAAAA GGACTTGAT TTTTTTG ACCAAGTCC TTTTGTCACTCTTCT SPy_0382 325890 - 326543 + | hypothetical protein TERM 391 326576 - 326548 - T 71 -5.3 -4.58424 | opp_overlap 326550, overlap 326550 TAGCACCATAGAAAA GAGCTAGGAACAA GGA CTGTTCTTAGCTT TTTGAGTGCTTTTAT TERM 392 326574 - 326550 - T 73 -7.9 -3.89814 | opp_overlap 326550, overlap 326548 GCACCATAGAAAAGA GCTAGGAACAA GGA CTGTTCTTAGC TTTTTGAGTGCTTTT TERM 393 326550 - 326574 + T 100 -9.4 -4.7329 | opp_overlap 326548 326550 GCACCATAGAAAAGA GCTAGGAACA AGGAC TGTTCTTAGC TTTTTGAGTGCTTTT fhuG 327625 - 326588 - | putative ferrichrome ABC transporter (permease) TERM 394 327651 - 327662 + r 70 -7.2 -3.72695 | opp_overlap 327650 TTAAGCTAACCAATG CCCC AAGA GGGG TTTCATAAGGCGGAT fhuB.1 328618 - 327698 - | putative ferrichrome ABC transporter (permease) TERM 395 327824 - 327814 - G 75 -5.4 -4.77775 | AGCCGATAAAAGAAA TGCT TCC AGCA ATGGCTACAGCTGCT fhuD 329561 - 328629 - | ferrichrome ABC transporter (ferrichrome-binding protein) TERM 396 329266 - 329279 + g 76 -2.4 -5.46629 | opp_overlap 329260, overlap 329260 329263 TCTAAATCAGTTGCA GCAA CTTGCT TTGC TTTTTTTACAGTCTT fhuA 330369 - 329587 - | putative ferrichrome ABC transporter ATP-binding protein TERM 397 330313 - 330301 - G 80 -6.3 -4.70583 | TTCAGGAATATAAAA CGATA ATT TATCG ATGATGGTACGCTGT TERM 398 330515 - 330502 - R 87 -6.7 -5.40625 | opp_overlap 330502, overlap 330495 ATAGCATAGAAAAAA GGCTT AACA AAGCC TTTTTTGATGTGATT TERM 399 330502 - 330515 + r 85 -6.7 -5.2422 | opp_overlap 330502 330495 ATAGCATAGAAAAAA GGCTT AACA AAGCC TTTTTTGATGTGATT TERM 400 330604 - 330554 - R 73 -3.7 -5.0917 | overlap 330556 GTATTAAAAAAGAAA TATTAGTTTAGAATGATTA AAAACAATAGCGA TAATCATTCTAAACTAACG TCAACATACTCTAGA TERM 401 330602 - 330556 - R 85 -8.5 -4.15047 | overlap 330554 ATTAAAAAAGAAATA TTAGTTTAGAATGATTA AAAACAATAGCGA TAATCATTCTAAACTAA CGTCAACATACTCTA murE 332060 - 330615 - | UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase SPy_0390 332148 - 333782 + | hypothetical protein TERM 402 333800 - 333826 + F 91 -5.3 -5.84381 | gap 1, opp_overlap 333800 TAATGACACCAAGAA CGATTTCG-TGA GTGC TTATCGAAATCG TTTTTTTCTTAATGA upp 333950 - 334579 + | uracil phosphoribosyltransferase SPy_0393 334548 - 334682 + | hypothetical protein clpP 334803 - 335393 + | ATP-dependent Clp protease proteolytic subunit TERM 403 335405 - 335440 + F 74 -9.2 -3.01712 | opp_overlap 335411 335414, overlap 335411 ATAAAGAGGATCTCT GCAAAAGTATTCTAGA AACT TCTAGGATGCTTTTTC TCTTAGAAAGGAAAA TERM 404 335411 - 335434 + F 84 -6.8 -5.0916 | opp_overlap 335411 335414, overlap 335405 AGGATCTCTGCAAAA GTATTCTAGA AACT TCTAGGATGC TTTTTCTCTTAGAAA SPy_0397 335885 - 336160 + | hypothetical protein TERM 405 336166 - 336154 - f 81 -7.7 -4.40037 | AAACAACCATCAAAA GGGTT AAC AACCC CCTAGTTACTGATTA TERM 406 336333 - 336355 + F 70 -4.2 -4.7329 | gap 1, opp_overlap 336333, overlap 336352 TGGTCCTAAAATAGA GCACTG-CA AAGATA TGCCAGTGC TTTTTAGCTCATTTT tdk 336409 - 337044 + | thymidylate kinase SPy_0400 337062 - 337937 + | DNA polymerase III subunit delta' SPy_0401 337956 - 338195 + | hypothetical protein TERM 407 338808 - 338788 - g 81 -6.9 -4.67011 | opp_overlap 338788 AACGGTAGCTAAAAA TCCTTCC AAACAAA GGAAGGA TCACTTAGAGGGAAT SPy_0405 338600 - 338923 + | DNA replication intiation control protein YabA TERM 408 338975 - 338962 - g 86 -2.4 -5.88197 | opp_overlap 338962, overlap 338966 338967 TTAAAGACAAAAAAA CAAG CGGAAC CTTG TATTTGGTTCCAACC TERM 409 339605 - 339589 - g 70 -7.9 -3.73775 | opp_overlap 339589, overlap 339591 CCTACCTTGAGGAAA CACCCCT CAA AGGGGAG TGTCTGCTGATTGTG TERM 410 339603 - 339591 - g 74 -9.1 -3.45324 | opp_overlap 339589, overlap 339589 TACCTTGAGGAAACA CCCCT CAA AGGGG AGTGTCTGCTGATTG SPy_0406 338928 - 339791 + | hypothetical protein SPy_0407 339818 - 340210 + | hypothetical protein TERM 411 340246 - 340220 - T 100 -9.6 -5.50925 | opp_overlap 340220 AACTAAGAGAAAAAA GACCATCAAT TGGATTT ATTGATGGTC TTTTAGGTGTTTAAA TERM 412 340220 - 340246 + T 100 -9.6 -4.323 | opp_overlap 340220 AACTAAGAGAAAAAA GACCATCAAT TGGATTT ATTGATGGTC TTTTAGGTGTTTAAA SPy_0408 340886 - 340257 - | hypothetical protein TERM 413 340701 - 340690 - G 73 -5.8 -4.60797 | TCGTTATAGACAAAA TCGC CACC GCGA GGTCGAATCATGGTC TERM 414 341159 - 341143 - H 80 -6.5 -4.7871 | overlap 341145 AATGATGACCAAAAA CAGGCGC CTC ACGCCTA AAACAGTTACACTAA TERM 415 341157 - 341145 - H 73 -6.9 -4.00443 | overlap 341143 TGATGACCAAAAACA GGCGC CTC ACGCC TAAAACAGTTACACT SPy_0410 341233 - 341541 + | putative arsenate reductase TERM 416 341547 - 341604 + T 100 -11.7 -4.62471 | gap 1, opp_overlap 341542 341562, overlap 341551 341562 TTTAGGATAATGCGA CAAAGTCTCAAAAAAGGACAAGGC AACATTATAAC GCCTTGTCCTTTTTTGGGA-TCTG TTTTTAGAAATTAGA TERM 417 341551 - 341602 + T 100 -13.4 -3.92577 | gap 1, opp_overlap 341542 341562, overlap 341547 341562 GGATAATGCGACAAA G-TCTCAAAAAAGGACAAGGC AACATTATAAC GCCTTGTCCTTTTTTGGGATC TGTTTTTAGAAATTA TERM 418 341562 - 341590 + T 88 -7.5 -5.08169 | opp_overlap 341562, overlap 341551 341547 CAAAGTCTCAAAAAA GGACAAGGC AACATTATAAC GCCTTGTCC TTTTTTGGGATCTGT TERM 419 341590 - 341562 - T 100 -10.3 -5.07107 | opp_overlap 341562 341551 341547 CAAAGTCTCAAAAAA GGACAAGGCAACA TTA TAACGCCTTGTCC TTTTTTGGGATCTGT exoA 342442 - 341615 - | putative 3'-exo-deoxyribonuclease TERM 420 342700 - 342689 - g 73 -2.2 -5.27923 | CAATGGCACAAAAAA CAGT CATC ACCG AAGAAACAACCGATT lctO 342670 - 343857 + | L-lactate oxidase prtS 344120 - 349063 + | putative cell envelope proteinase TERM 421 349063 - 349049 - f 83 -5 -5.44119 | TTTAGCCGAAAAAAA TCAACC AAA GATTGA TAACAAAGCGCAAAG TERM 422 349191 - 349229 + F 100 -20.6 -3.87505 | opp_overlap 349191 349193 349201, overlap 349193 349201 AGGAACAGACATAAA GACCATAAAAGCAAGCCA GTT TGGCTTGCTTTTATGGTG TTATTGTCGTGTGCT TERM 423 349229 - 349191 - f 100 -20.6 -4.21945 | opp_overlap 349191 349193 349201, overlap 349193 349201 AGGAACAGACATAAA GACCATAAAAGCAAGCCA GTT TGGCTTGCTTTTATGGTG TTATTGTCGTGTGCT TERM 424 349227 - 349193 - f 100 -23.2 -3.6979 | opp_overlap 349193 349191 349201, overlap 349191 349201 GAACAGACATAAAGA CCATAAAAGCAAGCCA GTT TGGCTTGCTTTTATGG TGTTATTGTCGTGTG TERM 425 349193 - 349227 + F 100 -23.2 -3.51879 | opp_overlap 349191 349193 349201, overlap 349191 349201 GAACAGACATAAAGA CCATAAAAGCAAGCCA GTT TGGCTTGCTTTTATGG TGTTATTGTCGTGTG TERM 426 349219 - 349201 - f 100 -13.2 -4.59207 | opp_overlap 349193 349191 349201, overlap 349193 349191 ATAAAGACCATAAAA GCAAGCCA GTT TGGCTTGC TTTTATGGTGTTATT TERM 427 349201 - 349219 + F 100 -13.2 -4.57533 | opp_overlap 349201 349193 349191, overlap 349193 349191 ATAAAGACCATAAAA GCAAGCCA GTT TGGCTTGC TTTTATGGTGTTATT TERM 428 349582 - 349572 - f 71 -6.8 -4.2687 | CTCAAAAAGCATAAA CAGC TCT GCTG ATGTGACATCTGATT TERM 429 349716 - 349688 - f 72 -5.9 -4.41633 | TAGGCTCAAAAATAA GGCATAGAATTCC AAA GGAAGTCGCTGCC GTGAGCACAACCTAA TERM 430 349770 - 349784 + F 100 -7.2 -5.86976 | opp_overlap 349770, overlap 349765 TTCTGCAATTTGAAA TACTGA ATT TCAGTA TTTTTTCTTTTGTAA SPy_0421 349834 - 350541 + | hypothetical protein metG 350781 - 352781 + | methionyl-tRNA synthetase TERM 431 352827 - 352804 - f 84 -6.8 -5.1101 | opp_overlap 352804 CTATTATTCAAAAAA CCTAAGCA AGAACATG TGCTTAGG TTTTTTTGATTGCCT TERM 432 352804 - 352827 + F 89 -6.8 -5.64006 | opp_overlap 352804 CTATTATTCAAAAAA CCTAAGCA AGAACATG TGCTTAGG TTTTTTTGATTGCCT TERM 433 353035 - 353020 - f 72 -6.2 -4.37092 | opp_overlap 353020 ATGGTTTTTATAAAA GTTAAG CATA CTTAAC TTTAGCCAAACAAAA TERM 434 353070 - 353053 - f 73 -7 -4.07285 | overlap 353051 TAGCCAAACAAAAGA GGACAC TAGAGC GTGTCC CACAAGACAGTTGAG nrdF 353276 - 354289 + | ribonucleotide-diphosphate reductase subunit beta nrdI 354293 - 354781 + | ribonucleotide reductase stimulatory protein TERM 435 356144 - 356159 + GT 75 -4.7 -5.00616 | overlap 356131 CAGTAGGATTAGGCG CCATG AACCTA CATGG TTTTTTGGCAACCAA nrdE.1 354748 - 356928 + | ribonucleotide-diphosphate reductase subunit alpha TERM 436 356993 - 357020 + T 100 -10 -5.44119 | opp_overlap 356995 356998 CACTCGACCTTTCAA GACAAGCAAG CATCAGCT CTTGCTTGTC TTTTTTTGGCCTCAA TERM 437 357118 - 357081 - T 72 -8 -3.44051 | gap 1, opp_overlap 357093, overlap 357093 TTTTGAGCATCAGAA CGTCA-AAAAAAAGGAC ATGGA GTCCTTTTTTTGTGAGG CCGTCACAAACTGCC TERM 438 357093 - 357105 + T 86 -4.8 -5.60993 | opp_overlap 357081 357093 GAACGTCAAAAAAAA GGAC ATGGA GTCC TTTTTTTGTGAGGCC TERM 439 357105 - 357093 - T 91 -4.8 -5.81032 | opp_overlap 357093, overlap 357081 GAACGTCAAAAAAAA GGAC ATGGA GTCC TTTTTTTGTGAGGCC TERM 440 357144 - 357158 + T 77 -3.5 -5.56568 | CTGCCCTTGAAATAC GCTTC TATGT GGAGC TTTTTTTGGTCCTGT SPy_0428 357874 - 357122 - | hypothetical protein TERM 441 357358 - 357380 + g 72 -9.2 -3.36273 | TGCTCATAAAACTGT GCTTGGTGTA GCG TGTACCAAGC TTGATCTTACAAAGG SPy_0430 358315 - 358869 + | hypothetical protein TERM 442 358861 - 358890 + TF 73 -3.7 -5.03145 | opp_overlap 358888, overlap 358888 ACATACTTAAGCGGT TTGTTCTAAAAAA TATT TTTTATAGTACAA TTTTTTAGCAAATTG SPy_0431 359177 - 358959 - | hypothetical protein TERM 443 359079 - 359099 + gF 100 -13.3 -5.2696 | CCCTTTAGTAGTCAG GCCACCTCT GAT AGGGGTGGC TTTTTTGGGTTTTAG SPy_0432 359143 - 359394 + | hypothetical protein TERM 444 359461 - 359423 - TR 100 -15.5 -3.37344 | opp_overlap 359425 359434, overlap 359425 359434 TTCGCACGCAATCAA CAGCACAAAAAGCACCC CTGAC AGGTGCTTTTTGTGCTT TAGCCAACCTATAGC TERM 445 359459 - 359425 - TR 100 -18.1 -3.25652 | opp_overlap 359425 359434, overlap 359423 359434 CGCACGCAATCAACA GCACAAAAAGCACCC CTGAC AGGTGCTTTTTGTGC TTTAGCCAACCTATA TERM 446 359425 - 359459 + Tr 100 -17.4 -3.54129 | opp_overlap 359425 359423 359434, overlap 359434 CGCACGCAATCAACA GCACAAAAAGCACC CCTGACA GGTGCTTTTTGTGC TTTAGCCAACCTATA TERM 447 359450 - 359434 - TR 81 -5.8 -4.98436 | opp_overlap 359425 359434, overlap 359425 359423 TCAACAGCACAAAAA GCACCC CTGAC AGGTGC TTTTTGTGCTTTAGC TERM 448 359434 - 359450 + Tr 77 -5.1 -5.04325 | opp_overlap 359434 359425 359423, overlap 359425 TCAACAGCACAAAAA GCACC CCTGACA GGTGC TTTTTGTGCTTTAGC SPy_0433 360120 - 359488 - | hypothetical protein TERM 449 360232 - 360248 + H 81 -10.9 -2.67735 | overlap 360231 360227 AGTCCTAGATTTCTC TGAGTGG CTG CCACTCA CTTAATGTTTCACTA TERM 450 360589 - 360608 + H 72 -2.8 -5.28755 | overlap 360591 TTTAAAGAAATACGA CTGTATCT TGAT AGGTACTG TTTTTTGATGTCTTT SPy_0435 360799 - 361119 + | hypothetical protein TERM 451 361146 - 361167 + T 74 -3 -5.27335 | gap 1 ATCCAGATATATATA GTAGCAGAG TAATT CTC-GCTGC TTTTTATTTCAACGC speJ 362130 - 361432 - | putative exotoxin (superantigen) TERM 452 362324 - 362339 + r 84 -6.8 -5.04325 | TTGTCTAGGTTCTAA GCACCT GTAA GGGTGC TTTTTGTGCTTTAGC SPy_0437 362992 - 362378 - | hypothetical protein SPy_0439 363353 - 363589 + | hypothetical protein fabG 363582 - 364280 + | 3-ketoacyl-(acyl-carrier-protein) reductase SPy_0441 364356 - 365315 + | NAD-dependent oxidoreductase TERM 453 365378 - 365401 + F 100 -12.4 -5.00884 | opp_overlap 365371, overlap 365379 TTGAAAGACGTGTTT TCACGAGGGG GAGC CCCCTCGTGC TTTTTTGGCAAAAAT TERM 454 365379 - 365400 + F 100 -15.9 -3.60048 | opp_overlap 365371, overlap 365378 TGAAAGACGTGTTTT CACGAGGGG GAGC CCCCTCGTG CTTTTTTGGCAAAAA SPy_0442 365648 - 366985 + | putative glycerol-3-phosphate transporter TERM 455 366998 - 367039 + F 77 -9.1 -3.28712 | gap 1, opp_overlap 366995 367006, overlap 367006 TAGCTAGGCAAATGC CTAAGAAAGACA-GACTT ATTGCTG AAGTCCTGTCTTTTTTAG TTATCACAAGCCGCA TERM 456 367006 - 367031 + F 72 -2.7 -5.32944 | gap 1, opp_overlap 366995 367006, overlap 366998 CAAATGCCTAAGAAA GACA-GACTT ATTGCTG AAGTCCTGTC TTTTTTAGTTATCAC TERM 457 367250 - 367263 + G 81 -6.7 -4.79223 | opp_overlap 367249 AGTATCTGGACTAAC CATGC TTGA GCATG TTTTTCGTAGTGTAA TERM 458 368246 - 368230 - g 70 -2.9 -5.02476 | ACATTGGTGAAAAAA CAAAGGC TGG GCATCTG ACTTATATTGGAAAC gcaD 367158 - 368540 + | putative UDP-N-acetylglucosamine pyrophosphorylase SPy_0444 368571 - 369125 + | hypothetical protein SPy_0446 369125 - 369376 + | hypothetical protein pfs 369396 - 370091 + | 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase SPy_0448 370242 - 370583 + | hypothetical protein TERM 459 370623 - 370660 + T 100 -24.5 -5.40072 | opp_overlap 370623 AGCCCCTCAAAAAAA GAGGCCACACTCATTTA AATT TAAATGAGTGTGGCCTC TTTTTTTGAGGAGAC TERM 460 370660 - 370623 - T 100 -24.5 -5.40474 | opp_overlap 370623 AGCCCCTCAAAAAAA GAGGCCACACTCATTTA AATT TAAATGAGTGTGGCCTC TTTTTTTGAGGAGAC SPy_0450 371331 - 370684 - | putative metal-dependent transcriptional regulator TERM 461 371828 - 371815 - g 83 -5.3 -5.25735 | opp_overlap 371827 TCAAAAAACGAAAAA CAAAG ATTA CTTTG CCGTGTCTGATGGCA mtsA 371477 - 372409 + | metal binding protein of ABC transporter (lipoprotein) TERM 462 372418 - 372448 + F 83 -6.2 -5.05113 | AAAATAAGATAACAA TAAAGCACAGCGAT TTT AGTGTTGTGCTTTG TTTTATTTATGTAAA mtsB 372473 - 373198 + | ABC transporter ATP-binding protein mtsC 373199 - 374053 + | ABC transporter (permease protein) TERM 463 374101 - 374112 + T 74 -2.2 -5.43414 | AATAGTAGCAAATAA CATC AAAG GGTG TTTTTTATATGTCAT SPy_0457 375007 - 374201 - | putative cyclophilin-type protein SPy_0458 375224 - 377629 + | hypothetical protein TERM 464 377669 - 377627 - T 85 -12.2 -3.02698 | opp_overlap 377632, overlap 377632 GTATTGCAGACAAAC TAAAAGAACCTGACGTCTCA TGA TGAGATGTTAGGTTCTTTTT TTGTGATGTCAAGCC TERM 465 377664 - 377632 - T 100 -12.1 -4.65153 | opp_overlap 377632, overlap 377627 GCAGACAAACTAAAA GAACCTGACGTCTCA TGA TGAGATGTTAGGTTC TTTTTTTGTGATGTC TERM 466 377632 - 377664 + T 100 -16.5 -5.69473 | opp_overlap 377627 377632 GCAGACAAACTAAAA GAACCTGACGTCTCA TGA TGAGATGTTAGGTTC TTTTTTTGTGATGTC SPy_0459 378052 - 377699 - | hypothetical protein TERM 467 378551 - 378510 - g 71 -6.5 -4.30844 | overlap 378513 ATTTCATCACTAAAA CACCACCAGCTGCTGTTCT TTTG AAAAAAGCTGCAGGTGTTG AAAAAGGATCAGGTA rplK 378296 - 378721 + | 50S ribosomal protein L11 TERM 468 378863 - 378845 - g 71 -5.3 -4.5187 | GCTAAAAAAAGCAAA CAAATGC GTGCT GCACTTG AAAAAGTAGATAGCA rplA 378827 - 379516 + | 50S ribosomal protein L1 TERM 469 379540 - 379525 - f 89 -3.3 -5.80364 | ACTTTAAGAAAAAAA TTAGG GCATCG CCTAA TCATAGCAAAAAGAC TERM 470 379567 - 379591 + F 86 -5.8 -5.42265 | AGACAAATTTCTGAA GACAAATCTT CACTA GAGGTTTGTC TTTTTTATGGTTTAA pyrH 379839 - 380567 + | uridylate kinase frr 380596 - 381153 + | ribosome recycling factor SPy_0464 381262 - 382119 + | hypothetical protein TERM 471 382143 - 382123 - f 70 -3.9 -4.98436 | opp_overlap 382125, overlap 382124 382125 TTAATAGGATAAAAA TGCTTTGCC ACT GGCAAAGTT TTTTGTTACAATGAA TERM 472 382142 - 382124 - f 71 -7.4 -3.57977 | opp_overlap 382125, overlap 382123 382125 TAATAGGATAAAAAT GCTTTGCC ACT GGCAAAGT TTTTTGTTACAATGA TERM 473 382125 - 382141 + F 100 -10.9 -5.46657 | opp_overlap 382124 382123 382125 AATAGGATAAAAATG CTTTGCC ACT GGCAAAG TTTTTTGTTACAATG TERM 474 382141 - 382125 - f 81 -10.9 -2.73702 | opp_overlap 382125, overlap 382124 382123 AATAGGATAAAAATG CTTTGCC ACT GGCAAAG TTTTTTGTTACAATG TERM 475 382521 - 382511 - g 81 -5.4 -5.0707 | AAAGACAAAAAGAAA TTGC AGA GCAA TCAAAAGCAAACTTG msrA.2 382192 - 382701 + | methionine sulfoxide reductase A SPy_0467 382698 - 382913 + | hypothetical protein TERM 476 382943 - 382929 - f 85 -6.4 -5.252 | opp_overlap 382929 382941 TACGTGGATAAAAAA GAGTCA TAT CGACTC TTTTGAAGGGTTATC TERM 477 383799 - 383789 - g 70 -3.2 -4.91109 | overlap 383797 383798 GCCCCAGCAGAAAAA GAAG AAA CCTC TGCGCCAGCAGCACA SPy_0469 383069 - 384238 + | putative 42 kDa protein TERM 478 384257 - 384274 + F 88 -7.7 -5.06103 | opp_overlap 384257 ATGCTATTAAAAAAA CTCACGT TTAG GCGTGAG TTTTTTGACAATTCT TERM 479 384274 - 384257 - f 93 -7 -5.52986 | opp_overlap 384257 ATGCTATTAAAAAAA CTCACG TTTAGG CGTGAG TTTTTTGACAATTCT TERM 480 385054 - 385066 + G 74 -6.3 -4.42806 | opp_overlap 385050 385045 AAACCATTGAAGAGT TCTTC TCA GAAGA TTTCTTTAAGAGTAA TERM 481 386289 - 386275 - g 85 -2.8 -5.71712 | overlap 386280 TCGGACATAAAAAAA TCAAGG ATA CCTTTA TCGAAGAATTGCTCA SPy_0470 384552 - 386324 + | 67 kDa Myosin-crossreactive streptococcal antigen TERM 482 386368 - 386345 - f 82 -9.7 -3.70149 | opp_overlap 386345 CTTAGAGTAGTTAAA GCTGATAAG TTTAGG CTTATCAGC TTTTTTGATGATTTA TERM 483 386345 - 386368 + F 100 -10.4 -5.243 | opp_overlap 386345 CTTAGAGTAGTTAAA GCTGATAAGT TTAG GCTTATCAGC TTTTTTGATGATTTA TERM 484 386702 - 386730 + G 71 -6.7 -4.12532 | GTGGGTCGTGGCATG GTGGTCAACACAT CAG ATGTGGTGACAGC TTTATCTATGGCAGA phoH 386483 - 387535 + | phosphate starvation-induced protein SPy_0472 387581 - 388156 + | hypothetical protein SPy_0473 388315 - 388812 + | putative metalloprotease TERM 485 388971 - 388981 + G 73 -5.4 -4.56187 | TTTTTAGCATTTCAG CCAT CGA ATGG TTATTTTTACTTCTA TERM 486 389064 - 389074 + G 73 -5.4 -4.57755 | TAGTTGATTTGGCTA GTGA CTA TCAC TTTTCTATGCTAGCT TERM 487 389110 - 389095 - g 72 -4.7 -4.66609 | opp_overlap 389109 TATGCTAGCTAAAAA TGCCA AGGATA TGGCA GCAGGTGCTGTTTTG TERM 488 389109 - 389120 + G 70 -5.8 -4.40993 | opp_overlap 389095 ATGCCAAGGATATGG CAGC AGGT GCTG TTTTGATGATTTCTG dgk 388793 - 389200 + | putative diacylglycerol kinase era 389320 - 390216 + | GTP-binding protein Era TERM 489 390381 - 390366 - g 72 -4.6 -4.77165 | GTGGTGATAAGAAAA CCTGGA CTAT TCCTGG TGGCACTATGGAACT SPy_0477 390236 - 390712 + | hypothetical protein TERM 490 390783 - 390798 + T 95 -9 -5.63103 | TGAAAGACGATATTC GAGAGC TTAT GCTCTC TTTTTTTGCTTCCAA TERM 491 390837 - 390857 + T 73 -4.1 -4.90525 | overlap 390839 ATTAAGTCTGAATAA TTTTGTTAA ATG TTAACAGGA TTTTCTTTCCAATTG SPy_0478 391271 - 391017 - | hypothetical protein SPy_0479 391669 - 391914 + | hypothetical protein SPy_0480 391929 - 392111 + | hypothetical protein TERM 492 392990 - 393043 + F 76 -4.3 -5.14985 | GTAAACTGAGTCATG GGAATAAATCTCTTTCTAGTA-AGT GTCGCA ACTCTACTATACAG-GATTTATTCC TTTTTGTGTGTTTAC SPy_0484 393535 - 393735 + | hypothetical protein SPy_0486 394029 - 394223 + | hypothetical protein TERM 493 394525 - 394559 + F 95 -8.8 -5.46657 | opp_overlap 394524 394525 TCATCTTTGCCAAAG CTCGTCATTTTATATG ATT TATATAGAATTACGAG TTTTTTGTTAGACTA TERM 494 394737 - 394749 + G 77 -7.7 -4.20354 | CAGATTCAGTCCATT CGTCT GAT AGACG TTTTGGAGTTGGCTT TERM 495 395401 - 395385 - g 81 -5.8 -5.08824 | overlap 395399 GTTTTATGGAAAAAA GGCTCC GTAAA AGAGCC TACTGAAGCCGATCA SPy_0488 394716 - 395711 + | hypothetical protein TERM 496 395795 - 395777 - g 90 -13.2 -2.70932 | GTTTCTTCTGAAGTA GCTGTGAG CGC CTCACAGC CGGAAGAATTGCATC SPy_0489 395756 - 396202 + | hypothetical protein TERM 497 396533 - 396509 - T 100 -10.8 -5.06451 | opp_overlap 396507 GATTAGCTTAAAAAA GAACACTACC GAAAT GGTAGTGTCC ACTGATTTTAGGAGA SPy_0492 396819 - 396550 - | hypothetical protein mutR 397890 - 398756 + | putative positive transcriptional regulator TERM 498 399588 - 399572 - g 77 -7.9 -4.30014 | opp_overlap 399571 TTTAGGAATTGAAAA GGGCGGT TCG ACCGTCC GTACTTACCGTAATG fpg 398928 - 399755 + | formamidopyrimidine-DNA glycosylase coaE 399752 - 400345 + | dephospho-CoA kinase SPy_0500 400535 - 402037 + | ATPase TERM 499 402186 - 402218 + G 70 -5.6 -4.37734 | CAAAATCTAAAAGTG GCTTGGCTTGGTAA CTTCT TTACTGGGGCAAGC TTTTCACTTGTTATG SPy_0501 402159 - 403352 + | putative multi-drug resistance efflux pump secG 403541 - 403777 + | preprotein translocase subunit SecG TERM 500 403782 - 403808 + F 89 -6.6 -5.60993 | opp_overlap 403781 CAAGTAAATAAGGAG TGAGCTTGAC AGAGTTA GTCTAGCTCA TTTTTTTATCAGCGA TERM 501 404000 - 403986 - g 76 -7.2 -4.26076 | overlap 403989 CCAGCCTTATTAAAA CCATTT CCA AAATGG AAAGTCAGAGCCTGT TERM 502 404084 - 404072 - g 87 -3.4 -5.79595 | CGTGAAAAGAAAAAA GAAC CTACT GTTC AGGGTGTTTTTCGTG SPy_0503 403871 - 406204 + | putative exoribonuclease R smpB 406207 - 406674 + | SsrA-binding protein TERM 503 406729 - 406701 - g 71 -6.8 -4.0251 | opp_overlap 406701 406707, overlap 406704 ATTATGATAACTAAA GGACAAGTTCGT TTGTT ACGAACTTATTC TTATGATAGCAACTT TERM 504 406707 - 406723 + G 71 -6.6 -4.05004 | opp_overlap 406704 406701, overlap 406701 ATAACTAAAGGACAA GTTCGT TTGTT ACGAAC TTATTCTTATGATAG TERM 505 407246 - 407234 - g 74 -9.1 -3.55563 | opp_overlap 407234 ACCTGATTCTGGAAA GGTGG TAG CCACC TATGATATTAGCCCT SPy_0505 406680 - 407399 + | putative glutamine cyclotransferase TERM 506 407483 - 407463 - T 84 -4 -5.67063 | opp_overlap 407463 407480 407481 TTTAGCACAAAAAAA CAGAGTTA GTTCA TATCTCTG TTTTTTTAAAATAGG TERM 507 407463 - 407483 + T 79 -4 -5.44119 | opp_overlap 407463, overlap 407480 407481 TTTAGCACAAAAAAA CAGAGTTA GTTCA TATCTCTG TTTTTTTAAAATAGG pcp 408162 - 407515 - | pyrrolidone-carboxylate peptidase SPy_0507 409138 - 408212 - | hypothetical protein SPy_0508 409821 - 409138 - | hypothetical protein SPy_0510 410958 - 410032 - | putative sugar transferase TERM 508 411068 - 411093 + r 95 -14.9 -3.29038 | opp_overlap 411068, overlap 411071 GGTTAAAAAATAAAA CAACAGAAGCT TTAA AGCTTCTGTTG TTAATAGTATTAGTT TERM 509 411093 - 411068 - R 100 -14.9 -5.42198 | opp_overlap 411068 411071 GGTTAAAAAATAAAA CAACAGAAGCT TTAA AGCTTCTGTTG TTAATAGTATTAGTT TERM 510 411071 - 411090 + r 90 -10.8 -3.77553 | opp_overlap 411068, overlap 411068 TAAAAAATAAAACAA CAGAAGCT TTAA AGCTTCTG TTGTTAATAGTATTA gloA 411480 - 411103 - | putative lactoylglutathione lyase SPy_0512 412156 - 411491 - | NAD(P)H-dependent quinone reductase pepQ 413290 - 412205 - | putative XAA-Pro dipeptidase; X-Pro dipeptidase TERM 511 413345 - 413330 - H 79 -4 -5.40474 | overlap 413340 413344 ATTTTTTCAAAAAAA GCTTAA AAAA TCAAGC TTCGAGTTAATTTTT TERM 512 413395 - 413340 - H 71 -3.1 -5.16472 | gap 2, overlap 413330 413344 413356 413389 AAAAAGCTTAAAAAA TCAAGC-TT-CGAGTTAATTTTTGAAA ACTT TTTCAAAAATTAACCTATAACACTTGA AAGTGGTTACAAATC ccpA 413464 - 414465 + | catabolite control protein A TERM 513 414550 - 414523 - f 84 -11.4 -3.01791 | opp_overlap 414529, overlap 414529 ACTGTTTCTTCAATA CTAAAATCAGCC TTAG GGCTGATTTTTG CATGTCTTAGTGAAA TERM 514 414529 - 414544 + F 93 -9 -4.74453 | opp_overlap 414523 414529 TCTTCAATACTAAAA TCAGCC TTAG GGCTGA TTTTTGCATGTCTTA TERM 515 414544 - 414529 - f 89 -9 -4.4261 | opp_overlap 414529, overlap 414523 TCTTCAATACTAAAA TCAGCC TTAG GGCTGA TTTTTGCATGTCTTA SPy_0515 414596 - 415594 + | putative sugar transferase SPy_0516 415596 - 416930 + | 1,2-diacylglycerol 3-glucosyltransferase TERM 516 417148 - 417175 + F 100 -10.6 -6.09196 | TAAGGTGGAACCACG CTGATTGCGTCC TTTG GGATGCGGTCAG TTTTTTTGTTTTGGA thrS 417352 - 419295 + | threonyl-tRNA synthetase TERM 517 419303 - 419332 + F 71 -6.5 -4.1673 | overlap 419309 AAGCTTAATCAATGG CAAAAAGAGGTCC TTAT GGGCTTCTTTTTC TTTCTTAAAAAATTA TERM 518 419309 - 419326 + F 84 -5.5 -5.47159 | overlap 419303 AATCAATGGCAAAAA GAGGTCC TTAT GGGCTTC TTTTTCTTTCTTAAA TERM 519 419352 - 419366 + F 79 -4.2 -5.36965 | opp_overlap 419349 419354, overlap 419354 419360 TTAAAAAATTAAGCA AACGGT TGC ACCGTC TTTTTTATGGTGTTA TERM 520 419364 - 419354 - f 71 -6.8 -4.1144 | opp_overlap 419352 419354 419360, overlap 419349 AAAAAATTAAGCAAA CGGT TGC ACCG TCTTTTTTATGGTGT TERM 521 419354 - 419364 + F 74 -6.8 -4.30057 | opp_overlap 419349 419354, overlap 419352 419360 AAAAAATTAAGCAAA CGGT TGC ACCG TCTTTTTTATGGTGT TERM 522 419481 - 419471 - g 78 -2.6 -5.42259 | CCACCTTCAAAAAAA TTTT TCC AAAA CCATTAAAGAGCCAG SPy_0518 419436 - 420428 + | putative ABC transporter ATP-binding protein SPy_0519 420430 - 421248 + | hypothetical protein SPy_0521 421250 - 422035 + | ABC transporter permease TERM 523 422124 - 422100 - f 81 -10 -3.49135 | opp_overlap 422100, overlap 422096 TAGATAATGAAGGAA GGCAGCTGTT GTAAA AACGGCTGCC TTTTTTTGTGATGGT TERM 524 422100 - 422124 + F 100 -12.2 -5.67967 | opp_overlap 422096 422100 TAGATAATGAAGGAA GGCAGCTGTT GTAAA AACGGCTGCC TTTTTTTGTGATGGT TERM 525 422405 - 422456 + F 70 -8.4 -3.17391 | gap 1, opp_overlap 422394 422387 422411, overlap 422405 422407 422409 422411 422421 TAAAGACAAGGTTTG TCAATACCATAAAAAAGTTAAG-TG TCA CAGCTTAGCTTTTTTATGGTGTCTA ATTCTTTATTCTATA TERM 526 422405 - 422457 + F 74 -6.8 -4.31697 | gap 2, opp_overlap 422394 422387 422411, overlap 422405 422407 422409 422411 422421 TAAAGACAAGGTTTG TCA-ATACCATAAAAAAGTTAAG-TG TCA CAGCTTAGCTTTTTTATGGTGTCTAA TTCTTTATTCTATAT TERM 527 422407 - 422454 + F 83 -11 -3.12788 | gap 1, opp_overlap 422387 422411, overlap 422405 422405 422409 422411 422421 AAGACAAGGTTTGTC AATACCATAAAAAAGTTAAG-TG TCA CAGCTTAGCTTTTTTATGGTGTC TAATTCTTTATTCTA TERM 528 422409 - 422452 + F 90 -13.6 -3.10303 | gap 1, opp_overlap 422387 422411, overlap 422407 422405 422405 422411 422421 GACAAGGTTTGTCAA TACCATAAAAAAGTTAAG-TG TCA CAGCTTAGCTTTTTTATGGTG TCTAATTCTTTATTC TERM 529 422450 - 422411 - f 85 -11.8 -3.02461 | gap 1, opp_overlap 422409 422407 422405 422405 422411 422421, overlap 422387 CAAGGTTTGTCAATA CCATAAAAAAGTTAAG-TG TCA CAGCTTAGCTTTTTTATGG TGTCTAATTCTTTAT TERM 530 422411 - 422450 + F 93 -14 -3.08961 | gap 1, opp_overlap 422387 422411, overlap 422409 422407 422405 422405 422421 CAAGGTTTGTCAATA CCATAAAAAAGTTAAG-TG TCA CAGCTTAGCTTTTTTATGG TGTCTAATTCTTTAT TERM 531 422421 - 422440 + F 70 -2.2 -5.35459 | gap 1, opp_overlap 422411, overlap 422411 422409 422407 422405 422405 CAATACCATAAAAAA GTTAAG-TG TCA CAGCTTAGC TTTTTTATGGTGTCT TERM 532 423834 - 423818 - gf 71 -8.7 -3.09327 | opp_overlap 423807, overlap 423806 GGACGCTATGGAATA GCTGCTA TAG CAGCAGC TGGTGGCCAAGGGTT SPy_0524 422780 - 423928 + | putative acetyl-CoA c-acetyltransferase TERM 533 423943 - 423933 - gf 93 -5.4 -5.63517 | TGCCCAAATAAAAAA GCTA TCG TAGC CGATCAGATAAGCTT TERM 534 424443 - 424433 - gf 89 -6.8 -5.27477 | opp_overlap 424433 ATGGCAAGCAAAAAA GGTG AGT CACC TTTACCTTTTACCGA SPy_0526 423885 - 425132 + | hypothetical protein TERM 535 425688 - 425717 + G 100 -13.7 -4.06419 | opp_overlap 425676 AGACGCCCAAGCTCT GGCCCTTTTTTTG AGGT CTAAAAAAGGGCC TTGTTTGTGGCGGCA SPy_0527 425227 - 426222 + | hypothetical protein vicR 426384 - 427094 + | two-component response regulator TERM 536 427378 - 427368 - g 87 -3.2 -5.7946 | overlap 427351 TGCCCAAGAAAAAAA TCGC TTG GCAA GTATTTTGGCTTATA TERM 537 428350 - 428382 + G 75 -10 -3.23274 | overlap 428355 428357 ATCTGGGCTAAGAGT GACTATGGTAAAGG ATCGA CCTTTACTATTGTC TTGCCTTATGAAAAA TERM 538 428409 - 428398 - g 72 -4.4 -4.72272 | TTGCCTTATGAAAAA GATG CAGC CATC TATGAAGAATGGGAG vicK 427087 - 428439 + | two-component sensor histidine kinase vicX 428443 - 429252 + | hypothetical protein TERM 539 429282 - 429314 + F 100 -12.1 -5.27399 | opp_overlap 429281 429282 429284 AGAGAATATGCAAAG TAGCGCTGATTGGTG ATA TACCAGTCAGGGCTA TTTTTTGATGTCTTA TERM 540 429314 - 429282 - f 73 -9.2 -2.87362 | opp_overlap 429282, overlap 429281 429284 AGAGAATATGCAAAG TAGCGCTGATTGGT GATAT ACCAGTCAGGGCTA TTTTTTGATGTCTTA TERM 541 429497 - 429552 + F 70 -7.2 -3.86903 | gap 2, opp_overlap 429497, overlap 429496 TAAAAACAAAAATAG CTCTATACTATCTGTAGTGGGACTGT AGTGGG AAATTCCC-CT-CAGATAGTGTAGAG TCTTTTGATTGTATG TERM 542 429645 - 429618 - f 73 -4.2 -4.85267 | opp_overlap 429618 ATAAATCACGAAAAA TCCACTTAGA GTCGGTTT TCTAGGTGGA TTTTTGGTATACTAA TERM 543 429618 - 429645 + F 83 -7.1 -4.82667 | opp_overlap 429618 ATAAATCACGAAAAA TCCACTTAGAG TCGGTT TTCTAGGTGGA TTTTTGGTATACTAA rnc 429696 - 430388 + | ribonuclease III TERM 544 432101 - 432089 - g 100 -5.5 -5.78622 | TTATTTGAAAAAAAA TCGCC AAG GACGA GCAACTTTTTTACCT smc 430389 - 433928 + | putative chromosome segregation SMC protein TERM 545 433933 - 433951 + T 100 -9.6 -5.52909 | opp_overlap 433933 TGACCAATTAAAAAA CAGAAGGG AGT TCCTTCTG TTTTTTTGGATGTTC TERM 546 433951 - 433933 - T 95 -8.9 -5.30155 | opp_overlap 433933 TGACCAATTAAAAAA CAGAAGG GAGTT CCTTCTG TTTTTTTGGATGTTC TERM 547 434051 - 434076 + T 100 -12.7 -4.71061 | opp_overlap 434051 TAGAGTACAAAGAAA GCCTTGGAAAT AGCA GTTTCCAAGGC TTTTTAGCTGTCGAT TERM 548 434076 - 434051 - T 100 -12 -4.60949 | opp_overlap 434051 TAGAGTACAAAGAAA GCCTTGGAAA TAGCAG TTTCCAAGGC TTTTTAGCTGTCGAT SPy_0533 435032 - 434181 - | putative positive regulator TERM 549 435102 - 435057 - H 71 -3.5 -5.06414 | overlap 435061 CTTTCCCAACAAAAA TCAATTCCGTTTTTTTTTATT GTAC AATAAATAAAAACTGAAAGGA AGTCCGCTTATGAAG TERM 550 435098 - 435061 - H 73 -7.3 -3.9407 | overlap 435057 CCCAACAAAAATCAA TTCCGTTTTTTTTTATT GTAC AATAAATAAAAACTGAA AGGAAGTCCGCTTAT TERM 551 435225 - 435205 - H 84 -11.3 -3.12668 | opp_overlap 435186 435205 TAGGTGTACACTTAA GTCTTTAGA GTA TCTAAAGAC TTATAGGTAATGGGT TERM 552 435205 - 435225 + H 89 -11.3 -3.37975 | opp_overlap 435205, overlap 435186 TAGGTGTACACTTAA GTCTTTAGA GTA TCTAAAGAC TTATAGGTAATGGGT aroE.2 435252 - 436178 + | shikimate 5-dehydrogenase SPy_0535 436175 - 437011 + | hypothetical protein SPy_0536 437013 - 437747 + | hypothetical protein SPy_0537 437740 - 438726 + | hypothetical protein SPy_0538 438736 - 439935 + | S-adenosylmethionine synthetase SPy_0539 439919 - 440887 + | hypothetical protein SPy_0540 440942 - 441931 + | hypothetical protein TERM 553 442261 - 442251 - f 86 -5.4 -5.61596 | ATGGTTAGAAAAAAA TCCT AGT AGGA CTGCAATCGAAGATG SPy_0542 442624 - 443781 + | UDP-glucose 6-dehydrogenase TERM 554 444193 - 444206 + G 70 -3.1 -4.9218 | ACTAATGTTATCTTG GCATT TATG AGTGC TTTTTCTAGTCCATC TERM 555 444266 - 444256 - g 74 -4 -5.07107 | GAAATTGTTAAAAAA GATA GTA TATC ACAACTTAATTCATT SPy_0543 443866 - 445074 + | putative efflux protein TERM 556 445165 - 445124 - T 77 -9.6 -3.03151 | opp_overlap 445124, overlap 445123 TTTTTCAAAGTAAAG GCACTAAGTTGATCTGAC TTACAC ATCTTATCAACTTAGTGC TTTTTTTATTTCTAG TERM 557 445124 - 445165 + T 100 -8.9 -6.02919 | opp_overlap 445124 445123 TTTTTCAAAGTAAAG GCACTAAGTTGATCTGA CTTACACA TCTTATCAACTTAGTGC TTTTTTTATTTCTAG SPy_0544 445386 - 445177 - | hypothetical protein SPy_0545 446221 - 445376 - | hypothetical protein TERM 558 446079 - 446101 + g 76 -3.4 -5.31275 | opp_overlap 446078 446079, overlap 446081 CGTTCAGTTGAGAAT TCGGAATCTA AAA TAGTTTCCAA TTTTTTGTGGTAAGC TERM 559 446264 - 446290 + r 100 -11.7 -5.30199 | AAGACTGCTTTCTAA CTCCAGCTTAG TATTT CTAAGTTGGAG TTTTTGTTGATTTTT SPy_0546 447034 - 446306 - | hypothetical protein SPy_0547 447249 - 447025 - | hypothetical protein SPy_0549 448343 - 447249 - | hypothetical protein TERM 560 447766 - 447751 - G 72 -3.2 -5.07567 | TGATAGGTTAAAAAA CCATCT GGGC AGAGGG CTATCAGATTCAGTG SPy_0550 448362 - 448676 + | hypothetical protein SPy_0552 448673 - 448996 + | hypothetical protein SPy_0553 449015 - 449287 + | hypothetical protein TERM 561 449344 - 449361 + F 93 -7.7 -5.60993 | opp_overlap 449344 AGAAATATACCGAAA GCACTTC AAAG GAGGTGC TTTTTTTGTACCCCA TERM 562 449439 - 449423 - g 79 -5.1 -5.10208 | TAATTGGAAGAAAAA GGGCT AGAGATA AGCCC CAAAACAGTTATGAA SPy_0555 449392 - 449844 + | putative portal protein - phage associated SPy_0556 449886 - 450224 + | hypothetical protein TERM 563 450235 - 450257 + F 77 -3.3 -5.4387 | ATTGATAAAAGGCAA GGGCGTATC AATTC GGCACGTCC TTTTTTAGTTTATCT TERM 564 450567 - 450593 + F 100 -10.3 -4.98911 | TAGTTTATCGCTTGT TTTATCGCTTG AAGAA CGAGCGATAAA TTTATTTTTATGGTA SPy_0558 450638 - 450979 + | hypothetical protein TERM 565 451416 - 451427 + G 70 -3 -5.10064 | opp_overlap 451416 TTCATTGGAATATAA TGAT GAAC ATCA TTTTTATGTGTTAAC SPy_0559 451003 - 451827 + | asparagine synthetase A SPy_0560 451805 - 453088 + | hypothetical protein TERM 566 455151 - 455141 - T 76 -4 -5.31158 | TAAAAAAATCAAAAA GTTT TTT AAAC ATGAATTATATTCGA TERM 567 455426 - 455394 - T 95 -8.7 -5.14563 | gap 1, opp_overlap 455394 GTCTCTACTAAAAAA TACTCCGTCTTCTA TGAAAC TAGAA-ACGGAGTA TTTCTGTTTGTCTAT TERM 568 455394 - 455426 + T 89 -8.7 -4.44187 | gap 1, opp_overlap 455394 GTCTCTACTAAAAAA TACTCCGTCTTCTA TGAAAC TAGAA-ACGGAGTA TTTCTGTTTGTCTAT tnpA 456754 - 455717 - | transposase TERM 569 456285 - 456300 + g 72 -3.3 -5.04868 | AGAATGACTTTGATA GACTT CACACC AAGTC TTTTGTTTGCTTTGG TERM 570 456879 - 456908 + H 83 -5.8 -5.03314 | AGTTCACTTCAAAAA CGGTCAGGTTAT CGAAAT ATAATCTGGCTG TTTTTTACGAATGGA TERM 571 457797 - 457771 - g 80 -11 -3.38281 | overlap 457766 457774 CTACGGAAAATGCAA GACCTGAAATCA AAG TGATTTCAGACC AAGTCATTGGCCACT TERM 572 457794 - 457774 - g 79 -11.3 -2.54586 | overlap 457771 457766 CGGAAAATGCAAGAC CTGAAATCA AAG TGATTTCAG ACCAAGTCATTGGCC SPy_0567 457059 - 457856 + | hypothetical protein SPy_0568 457860 - 458684 + | hypothetical protein TERM 573 458794 - 458772 - g 76 -7.1 -4.14627 | overlap 458773 458785 TTTTGACAGAAACAA CTCAGAAAG AGGAG CTTTCTGAA AAAGCCAATGAGCAA TERM 574 459342 - 459326 - g 79 -5.1 -5.17744 | overlap 459328 ACAGATCAAGAAAAA TACAAGC GTA GCTTGAA AAAAACGCGGACTGG TERM 575 459340 - 459328 - g 77 -7.7 -4.20491 | overlap 459326 AGATCAAGAAAAATA CAAGC GTA GCTTG AAAAAAACGCGGACT ftsY 458684 - 460234 + | putative signal recognition particle (docking protein) TERM 576 460271 - 460244 - T 100 -14.3 -4.90906 | opp_overlap 460244 TTATAACAGCAAAAA CCAGTCTCGTT TTATTG AACGAGACTGG TTTTTAGTATGTCAT TERM 577 460244 - 460271 + T 100 -15 -4.85129 | opp_overlap 460244 TTATAACAGCAAAAA CCAGTCTCGTTT TATT GAACGAGACTGG TTTTTAGTATGTCAT SPy_0570 461655 - 460288 - | putative drug resistance protein TERM 578 461404 - 461394 - G 72 -4.6 -4.81249 | TGCCAAATGTAAAAA GACC TGT GGCC ATAAAAAAGAGGGGT TERM 579 461598 - 461618 + g 85 -8.3 -4.43397 | overlap 461599 AAAAACCAATGAGTG CTATGGCGA TAA TCGCCATAA TTGTTTGTTTTGAAA TERM 580 461599 - 461617 + g 83 -11.8 -3.24954 | overlap 461598 AAAACCAATGAGTGC TATGGCGA TAA TCGCCATA ATTGTTTGTTTTGAA TERM 581 462753 - 462738 - g 89 -5.4 -5.39721 | opp_overlap 462738 TGAGGAGATAAAAAA GCGGTA CAAC TACCAC CTTAATTCAAGCGAA licT 461983 - 462825 + | putative transcription antiterminator TERM 582 462912 - 462890 - g 80 -10.6 -3.31416 | opp_overlap 462891, overlap 462885 AAAACAAATATTCAA CGTGTGACAC ACT GTGTAACACG TCTACGCTTAGTACT TERM 583 463891 - 463869 - g 73 -5.5 -4.65032 | opp_overlap 463882 CAAAGCAGAAACAAA CACGTCAAG TTGCC CTTGCCGCG GGGATTTCAGCTTTG TERM 584 464437 - 464425 - g 86 -7.7 -5.00616 | TGTTGCCTTAAAAAA CACAC GTG GTGTG GAAGTCTTGATTCAT SPy_0572 462827 - 464689 + | PTS system, beta-glucoside-specific IIABC component TERM 585 465290 - 465280 - g 76 -2.4 -5.38839 | GACAGAAAAAGAAAA GCTG AGC CTGC AAGATTTATACCAAG bglA 464708 - 466132 + | 6-phospho-beta-glucosidase TERM 586 466216 - 466190 - T 83 -6.7 -4.89729 | opp_overlap 466190 GATAAAACTCAAAAA GCATTTGTTTT GATAA AAAACAAGTGC TTTTTTATTAGTCTT TERM 587 466190 - 466216 + T 95 -8.9 -5.54885 | opp_overlap 466190 GATAAAACTCAAAAA GCATTTGTTTT GATAA AAAACAAGTGC TTTTTTATTAGTCTT SPy_0575 467046 - 466231 - | hypothetical protein SPy_0576 467948 - 467046 - | hypothetical protein TERM 588 467915 - 467900 - G 71 -4 -5.00642 | overlap 467902 467907 TAATGGACATAAAAA TCGCAA ACCA TTGCAA GACACTGGGAGGAAG TERM 589 468008 - 467976 - RH 71 -5.6 -4.50976 | gap 1, opp_overlap 467998, overlap 467978 467979 467981 TTCTAGATGATAAAA GAGGAGGCTGAAACA CGAA TGTT-CAGCCTCGAC TGATACGTTTTGTTA TERM 590 468005 - 467979 - RH 79 -10.3 -2.91099 | gap 1, opp_overlap 467998, overlap 467978 467976 467981 TAGATGATAAAAGAG GAGGCTGAAACA CGAA TGTT-CAGCCTC GACTGATACGTTTTG SPy_0577 468251 - 468096 - | hypothetical protein SPy_0578 468082 - 468279 + | hypothetical protein TERM 591 468317 - 468333 + FH 71 -3 -5.05153 | AACAATGCCAAAGCG GAAGTG TTGTT TACTTC TTTCTTTTTTAAAAT SPy_0580 468485 - 470617 + | hypothetical protein TERM 592 470714 - 470734 + G 71 -6.9 -4.11394 | TGGCGGTCGCTTTTT TCCAAAAGA TGG TCATTTGGA TTTTAACCCTAGGAT TERM 593 470964 - 470935 - g 73 -10.1 -2.84687 | opp_overlap 470944, overlap 470944 CTAATCATCATTATA GTTGCCAAACCTG TGGG CAGGTTTATCAAC GAAAAAGGCGTATCA SPy_0581 470604 - 471041 + | hypothetical protein TERM 594 471047 - 471032 - f 77 -3.2 -5.47821 | opp_overlap 471027 471032 471033, overlap 471033 ACTTATGGAAAAAAA TCAGTC GTAA GACTGG TTTTATTTTGCGAAA TERM 595 471032 - 471047 + F 79 -5.4 -5.07652 | opp_overlap 471032 471033, overlap 471027 471033 ACTTATGGAAAAAAA TCAGTC GTAA GACTGG TTTTATTTTGCGAAA SPy_0583 471105 - 471377 + | hypothetical protein TERM 596 471462 - 471497 + F 86 -8.4 -4.7629 | overlap 471469 TTGATATGTAAGTAA GCGAAGGGTCTTATCA ACTA TGATGAGGCTTTTTGC TTTTTGACTTAGTAA TERM 597 471469 - 471490 + F 83 -5.9 -5.18355 | overlap 471462 GTAAGTAAGCGAAGG GTCTTATCA ACTA TGATGAGGC TTTTTGCTTTTTGAC ptsK 471682 - 472674 + | HPr kinase/phosphorylase lgt 472671 - 473450 + | prolipoprotein diacylglyceryl transferase SPy_0587 473472 - 473879 + | hypothetical protein TERM 598 473990 - 473980 - g 73 -5.4 -4.57341 | AATCGTGCTGAAAAA GCTT ATC AAGC CTACAAAGAAAGTCC SPy_0588 473872 - 474300 + | hypothetical protein TERM 599 474392 - 474407 + T 95 -3.3 -6.20267 | ACTGAAGAAGGGGGG GATTG TGGCTT CAATC TTTTTTTGTTTTTGA TERM 600 474453 - 474434 - T 100 -7.2 -6.02914 | gap 1 TTGACACAAAAAAAA GAGTCACGT AAA ACG-GACTC TGGAAGTTACATCAG SPy_0589 474744 - 474460 - | hypothetical protein SPy_0590 474943 - 475869 + | putative protease SPy_0591 475960 - 477246 + | putative protease TERM 601 477262 - 477314 + F 100 -7.3 -5.77853 | gap 2, opp_overlap 477264 477281, overlap 477264 TAACAAGAAATACTA GAGGCCCTCTTTTTCCAA--ATGGT ATACG ACCATAGTTGGGAAAAGAGAGCCTG TTTTTTTTGAAAATT TERM 602 477264 - 477312 + F 100 -9.9 -4.52949 | gap 2, opp_overlap 477264 477281, overlap 477262 ACAAGAAATACTAGA GGCCCTCTTTTTCCAA--ATGGT ATACG ACCATAGTTGGGAAAAGAGAGCC TGTTTTTTTTGAAAA TERM 603 477312 - 477264 - f 77 -9.9 -3.02508 | gap 2, opp_overlap 477262 477264, overlap 477281 ACAAGAAATACTAGA GGCCCTCTTTTTCCAA--ATGGT ATACG ACCATAGTTGGGAAAAGAGAGCC TGTTTTTTTTGAAAA TERM 604 477419 - 477395 - f 89 -6.6 -5.64274 | opp_overlap 477395 TGAGTCATAAAAAAA GTGAAAAAAA GATGA TTTTTTCCAC TTTAATTTCGAATAG SPy_0593 477456 - 477668 + | hypothetical protein TERM 605 477968 - 477943 - T 100 -14.9 -4.16842 | opp_overlap 477946 GCTACTGTTAATAAA CCAGTCTTCAT GGTA ATGAAGACTGG TTAGAGATAATAAAA TERM 606 477946 - 477965 + T 72 -9.4 -2.72661 | opp_overlap 477943 ACTGTTAATAAACCA GTCTTCAT GGTA ATGAAGAC TGGTTAGAGATAATA lysS 479534 - 478041 - | lysyl-tRNA synthetase TERM 607 478451 - 478463 + g 77 -6.3 -4.62069 | TGATGATATGTCCGA CACTT ATG AAGTG TTTTTCGAGTGGGAC TERM 608 479184 - 479207 + g 79 -5.2 -5.07107 | GACTTCGCCTTCAAC GCCGATAAAG TCGC CTAAATCGGC TTTTTTGAAGATTTC TERM 609 480342 - 480356 + G 73 -7.1 -4.02334 | opp_overlap 480341 480342 GTCGTCAGCTAAAAC CAGGC ACTAA GCCTG TTTATGATGTGGCTA SPy_0596 479708 - 480610 + | hypothetical protein SPy_0598 481341 - 480718 - | putative phosphoglycerate mutase SPy_0599 482161 - 481682 - | putative transcription regulator TERM 610 482219 - 482196 - R 100 -7.6 -5.88197 | opp_overlap 482196 CTAAACATAAAAAAA TGGTATAACA ACAT TATTATACCA TTTTTTTAATGTAAG TERM 611 482196 - 482219 + r 86 -5.4 -5.58454 | opp_overlap 482196 CTAAACATAAAAAAA TGGTATAACA ACAT TATTATACCA TTTTTTTAATGTAAG SPy_0600 482815 - 482252 - | hypothetical protein TERM 612 482843 - 482822 - R 90 -8.1 -5.36441 | opp_overlap 482820 TGGTGACATAAAAAA CTCCTTTTG TGCA CAAAAAGAG TATCGCTTTCCAATC TERM 613 482988 - 483008 + r 83 -8.3 -4.36127 | opp_overlap 482987 482988, overlap 482980 ATATGATGAGATAAT CTCCTTGTC AAG GATAAGGGG TTTTAAATTATTGAC TERM 614 483081 - 483062 - R 85 -4.3 -5.75599 | opp_overlap 483062 TAAACTATAAAAAAA GATTAGC CATGAT GCTAACC TCTTAATTGTTGGAG SPy_0601 483932 - 483084 - | N-acetylmuramoyl-L-alanine amidase TERM 615 484470 - 484480 + G 73 -5.4 -4.6265 | CCTTGGGTCTTTTGG CAAG TTA CTTG TTTTGTGCTTGTTCT SPy_0603 484257 - 484760 + | hypothetical protein SPy_0604 484744 - 485130 + | hypothetical protein TERM 616 485178 - 485137 - T 100 -20.7 -2.81815 | opp_overlap 485142 485147, overlap 485140 485147 TTTAATTAGTAACTA TAATATAAAATAGACTTGG CACG CCAAGTCTATTTTATATTA ACCAAGAAGTGCTTT TERM 617 485175 - 485140 - T 100 -18 -3.55145 | opp_overlap 485142 485147, overlap 485137 485147 AATTAGTAACTATAA TATAAAATAGACTTGG CACG CCAAGTCTATTTTATA TTAACCAAGAAGTGC TERM 618 485142 - 485173 + T 100 -16.2 -3.01791 | opp_overlap 485140 485137 485147, overlap 485147 TTAGTAACTATAATA TAAAATAGACTTGG CACG CCAAGTCTATTTTA TATTAACCAAGAAGT TERM 619 485147 - 485168 + T 100 -11.7 -4.66537 | opp_overlap 485140 485137 485147, overlap 485142 AACTATAATATAAAA TAGACTTGG CACG CCAAGTCTA TTTTATATTAACCAA TERM 620 485168 - 485147 - T 100 -11.7 -4.76193 | opp_overlap 485147 485142, overlap 485140 485137 AACTATAATATAAAA TAGACTTGG CACG CCAAGTCTA TTTTATATTAACCAA bsaA 485655 - 485176 - | putative glutathione peroxidase TERM 621 485534 - 485550 + g 73 -8 -3.79138 | TGCAAGGCCTGGTAT TGTGGG GTTAG CCCACA TTTGGTAGCTGTATT pepF 487447 - 485648 - | putative oligopeptidase ppc 487642 - 490404 + | phosphoenolpyruvate carboxylase TERM 622 491285 - 491305 + G 80 -4.7 -5.25656 | overlap 491287 491289 CCTGTTTTTGGCTAT GTCGCTAAA CGT TTTAGTGCC TTTTTTAATCCTTTT ftsW 490544 - 491848 + | putative cell division protein TERM 623 491883 - 491849 - f 100 -19 -3.69338 | opp_overlap 491859, overlap 491859 AAGCAATTTCAATAA TATTCTAAAATCTCCT TTA AGGAGATTTTAGAATA TAGACAATCCCAGTT TERM 624 491859 - 491873 + F 85 -8.6 -4.16943 | opp_overlap 491859 491849 AATAATATTCTAAAA TCTCCT TTA AGGAGA TTTTAGAATATAGAC TERM 625 491873 - 491859 - f 85 -8.6 -4.21314 | opp_overlap 491859, overlap 491849 AATAATATTCTAAAA TCTCCT TTA AGGAGA TTTTAGAATATAGAC tuf 492202 - 493398 + | elongation factor Tu TERM 626 493454 - 493470 + F 100 -10.8 -4.87807 | opp_overlap 493454 CTTAAGTTTGAAGAA GCCCCC AATTC GGGGGC TTTTTGCTATCTTAA TERM 627 493470 - 493454 - f 90 -11.5 -3.65314 | opp_overlap 493454 CTTAAGTTTGAAGAA GCCCCCA ATT CGGGGGC TTTTTGCTATCTTAA tpiA 493639 - 494397 + | triosephosphate isomerase TERM 628 494392 - 494450 + T 91 -13 -3.25942 | gap 1, opp_overlap 494398 494411 494448, overlap 494398 494411 TTGCTTGATTTCCTT -AACTAAGTCATCTAAAAAAGAAAAGG TTAAAT CCTTTTCTTTTTTAGATGACTTAACTC TTACTATAAGAGAAT TERM 629 494443 - 494398 - T 100 -22.4 -3.34013 | opp_overlap 494392 494398 494411, overlap 494411 GATTTCCTTAACTAA GTCATCTAAAAAAGAAAAGG TTAAAT CCTTTTCTTTTTTAGATGAC TTAACTCTTACTATA TERM 630 494398 - 494443 + T 100 -22.4 -3.21062 | opp_overlap 494398 494411, overlap 494392 494411 GATTTCCTTAACTAA GTCATCTAAAAAAGAAAAGG TTAAAT CCTTTTCTTTTTTAGATGAC TTAACTCTTACTATA TERM 631 494411 - 494430 + T 84 -6.5 -5.10497 | opp_overlap 494411 494398, overlap 494398 494392 AAGTCATCTAAAAAA GAAAAGG TTAAAT CCTTTTC TTTTTTAGATGACTT TERM 632 494430 - 494411 - T 84 -6.5 -5.10497 | opp_overlap 494398 494392 494411, overlap 494398 AAGTCATCTAAAAAA GAAAAGG TTAAAT CCTTTTC TTTTTTAGATGACTT murN 495731 - 494496 - | putative peptidoglycan branched peptide synthesis protein, alanine adding enzyme TERM 633 494694 - 494708 + g 70 -8.6 -3.41051 | CTTGTGAATTGCCTT GAGCAT AGC ATGCTC TTGTAATAGAGCTGG TERM 634 495296 - 495307 + g 73 -5.8 -4.58663 | opp_overlap 495284 AAACAGGTTCACCCT CAGG ATAG CCTG TTTTTAAACCGTCAT murM 496944 - 495718 - | putative peptidoglycan branched peptide synthesis protein, serine/alanine adding enzyme TERM 635 496108 - 496118 + g 79 -3.2 -5.50313 | TAAATCTTTTTGTAG CCGT GCA ATGG TTTTTTGATTTTCTG TERM 636 496185 - 496209 + g 95 -3 -6.09888 | gap 2, overlap 496185 496186 CTTGTTCTGCTAAGG C-CTTG-TCCAA CTG TTGGATCAAGAG TTTTTTTTGTTCAGG TERM 637 496318 - 496328 + g 79 -3.2 -5.52384 | AAGGATAATGCCTTT TCGA TTC TCGG TTTTTTTCATCAAGG TERM 638 496525 - 496536 + g 76 -2.2 -5.40072 | TGTTCTGCCAGACCA TTCG ACAC CGAG TTTTTTTAGAAAAGC SPy_0617 497753 - 496944 - | hypothetical protein TERM 639 497291 - 497305 + g 83 -7.2 -4.70887 | opp_overlap 497288 497291 CAGGTTCATCAATCA TCATCA TTT TGATGA TTTCTTTATTGGTCA TERM 640 497938 - 497911 - R 100 -14.4 -4.90266 | opp_overlap 497913 497918 TGTAGTAACTAAAAA GATTGAAGAAAG TACT CTTTCTTCAATC TTAGAATGGAGACAA TERM 641 497913 - 497936 + r 84 -11.2 -3.05844 | opp_overlap 497911, overlap 497918 TAGTAACTAAAAAGA TTGAAGAAAG TACT CTTTCTTCAA TCTTAGAATGGAGAC SPy_0619 498137 - 497904 - | hypothetical protein TERM 642 498150 - 498124 - G 70 -3.6 -4.86385 | overlap 498132 498139 AGGCTCAAAAATAAA GCATAGAATTCC AAA GGAAGTCGCTGC CATAAGCATCACCTA SPy_0621 499510 - 498209 - | hypothetical protein TERM 643 498522 - 498500 - G 76 -9.2 -3.75015 | ATAATCTGGATCAAA GCCAACTGAT TCG ACCAATTGGC GCAAGCGTTCTAACT TERM 644 498993 - 498981 - G 77 -4.9 -4.91109 | TTGGCAGCAGAAAAA TAAGA ATC TCTTA AAAGGTAATCCATAC SPy_0622 499592 - 499978 + | hypothetical protein TERM 645 500137 - 500163 + F 84 -6 -5.27335 | opp_overlap 500124 500158 500160 AATCTTAAACAGCGA GACTTGTTTA AGAAAAA TAAACAGGTC TTTTTATTTGAACAA TERM 646 500196 - 500158 - f 83 -6.2 -5.05606 | opp_overlap 500137, overlap 500160 TTTAAGAAAAATAAA CAGGTCTTTTTATTTGAA CAA CTAAAATAAAAAGACCAA GGAGGTACTAATTTG TERM 647 500194 - 500160 - f 100 -11 -4.13123 | opp_overlap 500137, overlap 500158 TAAGAAAAATAAACA GGTCTTTTTATTTGAA CAA CTAAAATAAAAAGACC AAGGAGGTACTAATT TERM 648 501461 - 501474 + G 71 -6.7 -3.99678 | TGGCAGAACCTCGTG TGGCA GAAC TGCCA TTTGATTCTGACCGT pacL 500209 - 502890 + | putative calcium-transporting ATPase TERM 649 502903 - 502926 + T 100 -14 -5.67967 | opp_overlap 502903 TAATAGACGCTAAAA GGTTTGAGAC AATT GTCTCAAACC TTTTTTTATAATCGT TERM 650 502926 - 502903 - T 100 -14 -4.19472 | opp_overlap 502903 TAATAGACGCTAAAA GGTTTGAGAC AATT GTCTCAAACC TTTTTTTATAATCGT regR 503969 - 502974 - | LacI family transcriptional regulator TERM 651 503845 - 503856 + g 72 -3.6 -5.09521 | GTAGCTTTGATACTC TCGC TGAT GCGG TTTTTAGTTTCTTCA SPy_0628 505940 - 504033 - | hypothetical protein TERM 652 505824 - 505840 + g 70 -3 -5.14965 | AAAGGTATTGGTTAA GAGTAG GTCAG CTATTC TTTTTTGATCAGCAT TERM 653 506017 - 505966 - R 95 -8.9 -5.07652 | gap 1 CTTTCCAAAAGAAAA GAGACCTCATCATGTGCTTAGGAA CTATT TCCCTATGCTCATAAC-AGGTCTC TATGAACCATTAAGC agaD 506848 - 506027 - | PTS system, N-acetylgalactosamine-specific IID component TERM 654 506803 - 506793 - G 73 -6.8 -4.24342 | opp_overlap 506791 506793 506795 TTTTGTAGGAAGAAA GCTC TCA GAGC TGTTTTGAGGTAATC agaW 507617 - 506835 - | PTS system, N-acetylgalactosamine-specific IIC component agaV 508124 - 507636 - | PTS system, N-acetylgalactosamine-specific IIB component TERM 655 507714 - 507704 - G 79 -6.8 -4.56597 | TTTTGGTGTTAAAAA CCAC GTG GTGG TCATGGGCTAAGCAA ugl 509359 - 508160 - | putative unsaturated glucuronyl hydrolase TERM 656 508926 - 508942 + g 82 -10.9 -3.50393 | TGGACTAATTTGTCG GCTGCTT TCA AAGCAGC TTCTCTAGACTCAGG agaF 509796 - 509359 - | putative PTS dependent N-acetyl-galactosamine- and galactosamine IIA component TERM 657 510820 - 510834 + G 82 -6.4 -4.87665 | overlap 510822 GGACAACAGAAGACT TAGCTG GTC CAGCTG TTTTTCTAGCTAGCG TERM 658 510822 - 510832 + G 71 -6.8 -4.06182 | overlap 510820 ACAACAGAAGACTTA GCTG GTC CAGC TGTTTTTCTAGCTAG idnO 510132 - 510926 + | gluconate 5-dehydrogenase TERM 659 510990 - 510977 - g 79 -6.7 -4.50193 | ATTAATTAATGAAAA TAGCC AAGC GGCTA AAAATGGTATCATTT SPy_0637 510951 - 511592 + | hypothetical protein kdgK 511621 - 512622 + | 2-dehydro-3-deoxygluconokinase kgdA 512627 - 513262 + | keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase TERM 660 513902 - 513937 + G 73 -7 -4.20148 | opp_overlap 513936 CTCGAAGCGTCAGGA TGTTTTGTTGGCGTTG GAGA CAACGCAAATAAAAGA TTATTTTGAAATAAT TERM 661 513953 - 513936 - g 79 -5.7 -4.94962 | opp_overlap 513902 ACAACGCAAATAAAA GATTATT TTGA AATAATC CTAGCGCGTGAAGAT TERM 662 514079 - 514068 - g 75 -5.8 -4.7173 | overlap 514072 GAGGACAGCCAAAAA GGCA TTGC TGCC GCCAAAGCAGCCAAT SPy_0640 513552 - 514208 + | hypothetical protein TERM 663 515167 - 515153 - g 70 -2.8 -5.10029 | overlap 515165 AGCAACCTCAAAAAA CACCTT ATA AACGTG GAAAAATTACACCTA SPy_0642 514849 - 516024 + | iron-sulfur cluster-binding protein TERM 664 516301 - 516283 - g 71 -6 -4.26079 | opp_overlap 516282 CTAAATGAGTTAAAA GGTAAGTA TGA TACTTTCC ATAATATGCAAGAAT TERM 665 516498 - 516479 - g 71 -7.2 -3.89524 | gap 1, overlap 516483 ATGCTATCTTAGAAA TCCATCCTG GTT CAGGA-GGA ACTGAAGCGCAAGAT prfB 516178 - 517191 + | peptide chain release factor 2 TERM 666 517582 - 517564 - g 80 -4.4 -5.21709 | opp_overlap 517563 517564 CGCCACATTAAAAAA CGCGTGCC AGA GGTACTCG ATTTAGTTGGCTTGA ftsE 517210 - 517902 + | putative cell-division ATP-binding protein ftsX 517886 - 518824 + | putative cell-division protein TERM 667 519048 - 519004 - T 100 -14.6 -4.90381 | opp_overlap 519005 519007 519015, overlap 519005 TTCAAGAGAAGAAAA GCACCCCAAAAGTTAGAT GTTTGATGT ATCTAACTTTTGGGGTGT CATTCAAAATTTAGT TERM 668 519047 - 519005 - T 100 -18.1 -3.53144 | opp_overlap 519005 519007 519015, overlap 519004 TCAAGAGAAGAAAAG CACCCCAAAAGTTAGAT GTTTGATGT ATCTAACTTTTGGGGTG TCATTCAAAATTTAG TERM 669 519005 - 519047 + T 100 -19.5 -2.74514 | opp_overlap 519004 519005, overlap 519007 519015 TCAAGAGAAGAAAAG CACCCCAAAAGTTAGATGT TTGAT GTATCTAACTTTTGGGGTG TCATTCAAAATTTAG TERM 670 519007 - 519045 + T 100 -16.3 -2.91467 | opp_overlap 519005 519004, overlap 519005 519015 AAGAGAAGAAAAGCA CCCCAAAAGTTAGATGT TTGAT GTATCTAACTTTTGGGG TGTCATTCAAAATTT SPy_0646 519832 - 519134 - | hypothetical protein TERM 671 520781 - 520803 + H 100 -12.8 -5.02476 | opp_overlap 520778 AATGATTAATACTGA CACTGTGGGT TTC ACTCACAGTG TTTTTTAAGAAGTAT TERM 672 522055 - 522041 - g 70 -2.7 -5.04868 | opp_overlap 522041, overlap 522036 CGAAATCAAACAAAA GCAGC GCTTT GCAGC TTATTTTGAGCAGCT TERM 673 522438 - 522423 - g 72 -4.7 -4.73614 | TACTATCAAAATAAA GAGCA CCAGCT TGCTC ATGATTGGTCTCGTA dinG 520872 - 523373 + | bifunctional ATP-dependent DNA helicase/DNA polymerase III subunit epsilon TERM 674 523360 - 523400 + F 100 -10.8 -4.74801 | opp_overlap 523358, overlap 523361 TAGTAGAAACGGACT GTTTTCTGATATAATGGA AAGGA TCTATTATATCAGAAAAA TTTTTAATGGCGTTA TERM 675 523361 - 523399 + F 100 -14.3 -3.44158 | opp_overlap 523358, overlap 523360 AGTAGAAACGGACTG TTTTCTGATATAATGGA AAGGA TCTATTATATCAGAAAA ATTTTTAATGGCGTT aspC 523708 - 524901 + | aspartate aminotransferase asnC 524922 - 526268 + | asparaginyl-tRNA synthetase TERM 676 526306 - 526272 - f 91 -11.8 -3.67112 | opp_overlap 526272 526280, overlap 526280 ATTAGACCCTAATAA TACAAAAAGTTCAT GTCATCT ATGAACTTTTTGTA TTGGTAAGAAGTGAG TERM 677 526272 - 526306 + F 91 -12.5 -3.14931 | opp_overlap 526272 526280, overlap 526280 ATTAGACCCTAATAA TACAAAAAGTTCATG TCATC TATGAACTTTTTGTA TTGGTAAGAAGTGAG TERM 678 526298 - 526280 - f 71 -3.2 -5.2015 | opp_overlap 526272 526280, overlap 526272 CTAATAATACAAAAA GTTCAT GTCATCT ATGAAC TTTTTGTATTGGTAA TERM 679 526280 - 526298 + F 73 -3.9 -5.1244 | opp_overlap 526280 526272, overlap 526272 CTAATAATACAAAAA GTTCATG TCATC TATGAAC TTTTTGTATTGGTAA SPy_0652 526682 - 527572 + | hypothetical protein SPy_0653 527569 - 528546 + | hypothetical protein TERM 680 529067 - 529035 - g 84 -7.9 -4.68424 | CAACTCATGCAAAAA TTTATGCTAGATG CCAAAAC CATCGAGCATAAA AGCGGTGCAGTTACT SPy_0654 528543 - 529454 + | hypothetical protein TERM 681 529465 - 529488 + T 100 -10.4 -5.71712 | overlap 529486 TATAGAACATTTTTA TCGTATGAGC CTTT GTTCATACGA TTTTTTTGTCTAAAA int1 531046 - 529631 - | putative integrase; bacteriophage 370.1 TERM 682 529755 - 529769 + g 75 -2.8 -5.24796 | TTATCCATCAGCATT CCAAGA GAG TCTTCG TTTTTCTTGTCTAAA TERM 683 529883 - 529902 + g 83 -3.6 -5.66684 | opp_overlap 529887, overlap 529887 CAAATCATTAATATA TAAATCGT TTAG ACGATTGA TTTTTTTATCGATTA TERM 684 530521 - 530535 + g 73 -2.1 -5.34055 | TAGCAGCCTCTAACT CGTTG ACCGA CAATG TTTTTTCGTCTTTGT TERM 685 531091 - 531105 + r 70 -4.2 -4.82667 | opp_overlap 531091 531089 AGTACAGTAAAGAGA CCTACT TAA AGCAGG TTTTTACTATACTAG TERM 686 531125 - 531161 + r 95 -4.4 -6.14618 | gap 1 TACTATACTAGATTC GCCTCACGCTCGCAC CGACCAAA GT-TGAGCGGGGGGC TTTTTTTATTTTGTC SPy_0656 531532 - 531167 - | hypothetical protein SPy_0657 532320 - 531559 - | putative cI-like repressor, phage associated SPy_0658 532504 - 532734 + | putative Cro-like protein, phage associated TERM 687 532774 - 532748 - f 85 -4.4 -5.65927 | GATGCAAATAAAAAA GCCCTGTAAAAT AGC AGTTTACGGGAC AGACAGATTCTTATG SPy_0659 532803 - 532940 + | hypothetical protein SPy_0660 532942 - 533067 + | hypothetical protein SPy_0661 533064 - 533291 + | hypothetical protein SPy_0663 533291 - 534610 + | hypothetical protein TERM 688 535301 - 535281 - g 74 -4 -5.08824 | gap 1, overlap 535282 GTGGGATGCAAAAAA CCGTCATGG GTTA CCA-GACGA AATGCCTCTTGACTA SPy_0664 534625 - 535716 + | hypothetical protein SPy_0665 535756 - 536178 + | hypothetical protein TERM 689 536253 - 536237 - g 74 -5.1 -4.74132 | ACAGCTCACGAAAAA CCTAAGA CTA TCTTGGG TAGTGATGGTAAAGA SPy_0666 536180 - 536914 + | hypothetical protein SPy_0667 536936 - 537571 + | hypothetical protein TERM 690 537633 - 537652 + G 70 -9.4 -2.72839 | opp_overlap 537630 537618, overlap 537621 537636 CGAGTGGGAAGACGG CAAGAAGA GAAC TCTTCTTG TCCTTCCAACTGGTT SPy_0669 537571 - 539154 + | DEAD box family helicase SPy_0670 539164 - 539793 + | hypothetical protein SPy_0671 539783 - 542056 + | hypothetical protein TERM 691 542184 - 542200 + F 72 -8.1 -3.39892 | opp_overlap 542187, overlap 542187 AGAAAATACAGCCTA TAACTCT TTC AGAGTTA TTATAAAATGTTTTT TERM 692 542283 - 542234 - f 82 -8.9 -3.92659 | gap 3, opp_overlap 542233 542234 542241, overlap 542211 542241 TCGTCAAAAGTCAAA GGGA-AAAGGA-AGAGGGG-CG ACTGAGCTA CGCCCCCTCTGTCCTTTGTCCC ATATTTGACAAAGGC SPy_0672 542334 - 542552 + | hypothetical protein SPy_0673 542545 - 542940 + | phage associated protein SPy_0674 542937 - 543158 + | hypothetical protein SPy_0676 543435 - 544070 + | phage associated protein TERM 693 544085 - 544105 + F 81 -9.7 -3.36273 | ACCAATAACGGTATC CCGCACG TTCGACT CGTGCGG TTGGTATTGACCGAA TERM 694 544292 - 544274 - f 82 -4.5 -5.54907 | overlap 544268 TCCACAAAACAAAAA GACGTCC ACACG GAACGCC CCCTTGGTTAAATTT SPy_0677 544343 - 544777 + | phage associated protein TERM 695 545040 - 545058 + F 89 -7.4 -5.24796 | ACTCAATATGCACTA GTCATCAC ACC GTGGTGGC TTTTTATTATGTAAA SPy_0679 545087 - 546253 + | phage associated protein TERM 696 546682 - 546668 - g 89 -5.6 -5.49809 | GAAATTGCAAAAAAA GGAGGC ATA GCTTCC GGCAAAGCTAGGAGG SPy_0680 546596 - 547072 + | hypothetical protein TERM 697 547126 - 547099 - f 81 -7.8 -4.41616 | opp_overlap 547105, overlap 547105 ATCTTTTCAAATAAA CAAAAAGACGTC ATTA GACGCCCTTTTA ACTACGAATTAGAGG TERM 698 547120 - 547105 - f 87 -6.8 -5.5454 | opp_overlap 547105, overlap 547099 TCAAATAAACAAAAA GACGTC ATTA GACGCC CTTTTAACTACGAAT TERM 699 547242 - 547232 - g 70 -5.4 -4.46656 | opp_overlap 547217 547215, overlap 547224 GTCAGAAGATGAAAA TCAC CTT GTGA CTGCTTATAATCAAG TERM 700 547347 - 547335 - g 77 -4.8 -4.88405 | opp_overlap 547345 AACTGTGAAATAAAA CACG ACGAG CGTG GAGATCACTTGTTAA SPy_0681 547155 - 548366 + | hypothetical protein TERM 701 549135 - 549150 + G 70 -9 -3.21269 | opp_overlap 549135 549123, overlap 549133 549132 TAACAAGGATATTAA TAGCCC ACTT GGGCTA TCTATCTTTGATAAC TERM 702 549150 - 549135 - g 72 -9 -3.35176 | opp_overlap 549133 549132 549135, overlap 549123 TAACAAGGATATTAA TAGCCC ACTT GGGCTA TCTATCTTTGATAAC SPy_0682 548380 - 549882 + | putative minor capsid protein, phage associated SPy_0683 549887 - 551380 + | putative minor capsid protein, phage associated SPy_0684 551380 - 551607 + | hypothetical protein TERM 703 551642 - 551664 + F 100 -9.2 -5.37345 | opp_overlap 551640 CTTATTAAATCTAGA GCATTTAGCT AAA AGCTAGGTGC TTTTTTGTACTTAAA SPy_0685 551694 - 551960 + | hypothetical protein TERM 704 552000 - 552015 + F 82 -5.4 -5.21236 | opp_overlap 552000 CCTTTAGAAATCAAA GTCGTA GCAA TACGGC TTTTTATTATGCCTT TERM 705 552371 - 552356 - g 78 -7.6 -4.3453 | AATGCTAAAGACAAA GAGCTT GAGG AAGCTC GGGCAAACAATAAGG SPy_0686 552086 - 552700 + | hypothetical protein TERM 706 552756 - 552736 - g 72 -9.7 -2.97721 | overlap 552735 TAAAATGGCACAAAT GCTAGACCC TGA GGTTCTAGC GGATATGATTGACGC SPy_0688 552704 - 553522 + | putative major head protein, phage associated TERM 707 553678 - 553666 - g 77 -4.8 -4.95854 | opp_overlap 553668 GAAAAAATGGAAAAA CGTG CTAGC CACG CTGTCAATCTTTACT TERM 708 553834 - 553808 - g 71 -9.5 -2.80195 | opp_overlap 553805 553815, overlap 553805 553810 ACTCAGGAGTAATGA CAGCAGAGGAT AAACA ATCCTTTGCTG GAATATCTCTAGGAC SPy_0689 553576 - 553992 + | hypothetical protein TERM 709 554052 - 554070 + G 89 -9.6 -4.18401 | AAGGTGATTATGGAG GGTTTGTC TAT GACGAACC TTTTACACTCTCTCC SPy_0690 553982 - 554314 + | hypothetical protein SPy_0691 554314 - 554670 + | hypothetical protein TERM 710 554821 - 554801 - g 71 -6.9 -4.0098 | TGGGAAGGTAAATAA CGAGTAC ATGGACG GTACTCG TGAGATAAGCCTGCC SPy_0693 554667 - 555065 + | putative minor capsid protein, phage associated SPy_0694 555065 - 555460 + | putative major tail shaft protein, phage associated TERM 711 555556 - 555573 + F 79 -8.4 -4.08064 | opp_overlap 555556 555568 AGCGATGTGAGACAA GGGTGG GCTAAA CCACCC TTTTAAGGAGGAATT TERM 712 555573 - 555556 - f 72 -8.4 -3.50572 | opp_overlap 555556, overlap 555568 AGCGATGTGAGACAA GGGTGG GCTAAA CCACCC TTTTAAGGAGGAATT SPy_0695 555589 - 556023 + | hypothetical protein SPy_0696 556027 - 556608 + | phage associated protein TERM 713 556855 - 556841 - g 73 -8.6 -3.74747 | CCAAGGGTCATGAAA GCTATG GGG CATAGC GCTGAGTATGTTGCT TERM 714 557232 - 557212 - g 76 -4.7 -5.1675 | opp_overlap 557212 557213, overlap 557213 TGAGGCATTAAAAAA CGGGCAAAT AAC ATTTGACCA ATTTTCTAATAAGTT TERM 715 559647 - 559607 - g 93 -11.4 -4.53303 | gap 1, opp_overlap 559605 GATGCGGATAGAAAA GTCATTGACTCATCTATGC AAAA GC-TAAAAGAGTCAATGAC GATTAATGCGACCCC SPy_0697 556598 - 559858 + | hypothetical protein SPy_0698 559855 - 560571 + | hypothetical protein TERM 716 560887 - 560874 - g 71 -6.7 -4.09243 | GATATTGCTTTAAAA CCGTT TGTA AACGG TGCGAGCGTAGGAGC TERM 717 561447 - 561414 - g 100 -8.1 -5.98675 | GACAAAAATAAAAAA GAGCCAACGATCGAA GAAA TCCGAAAGCTGGCTC AGAAATACCTTAAGG SPy_0700 560568 - 562712 + | hypothetical protein TERM 718 563381 - 563369 - g 79 -5.5 -4.84359 | CGAGGGTCAGAAAAA GCGCT AGG AACGC TAAAAATTACTCATG hylP1 562709 - 563722 + | hyaluronidase, phage associated TERM 719 564260 - 564250 - g 71 -6.8 -4.09864 | ATCGAGGGGCTAAAA GCCA CAA TGGC CAATGATAAAATCGG TERM 720 564931 - 564920 - g 74 -4.4 -4.91109 | CCTTTACCACAAAAA TAGC CGAG GCTA TCAAGATTAGGGCTG SPy_0702 563737 - 565623 + | hypothetical protein TERM 721 565881 - 565850 - g 77 -5.2 -4.93296 | gap 1 TGATGAGCACAAAAA CATCAAGC-TAGCAG ACC CCGCTAAACTCGACG AGCTCAACGACCTAC SPy_0703 565635 - 566066 + | hypothetical protein SPy_0705 566069 - 566686 + | hypothetical protein TERM 722 566877 - 566848 - g 82 -8.6 -4.16943 | gap 1 TGTTACACGCCAAAA TGCTCGGCG-GCT TGAAG AGCACGCTGAGCA AAATAAAACGTTGAT TERM 723 566935 - 566917 - g 76 -4.7 -5.02715 | AGAGCAAATTAAAAA TTTAACA GATGA TGTTAAA GATTTAAAAGATATG SPy_0706 566696 - 566971 + | hypothetical protein SPy_0707 566968 - 567195 + | putative holin, phage associated TERM 724 568340 - 568319 - g 84 -12.3 -2.94062 | opp_overlap 568317 GAGATCAATATCAGA CGCTGGCCA AGTC TAGCCAGCG AGGTTGTAGGTATCT SPy_0710 567311 - 568513 + | phage associated protein TERM 725 568567 - 568536 - T 83 -10.2 -3.31905 | opp_overlap 568541, overlap 568541 AGCTCCGAGATAAGA CAAAACCGCTCAGA TTAT TCTGGGCGGTTTTT TGTGTATGATGAATT TERM 726 568562 - 568541 - T 100 -10.1 -4.76963 | opp_overlap 568541, overlap 568536 CGAGATAAGACAAAA CCGCTCAGA TTAT TCTGGGCGG TTTTTTGTGTATGAT TERM 727 568541 - 568562 + T 100 -12.3 -5.43414 | opp_overlap 568541 568536 CGAGATAAGACAAAA CCGCTCAGA TTAT TCTGGGCGG TTTTTTGTGTATGAT speC 569288 - 568581 - | pyrogenic exotoxin C precursor, phage associated TERM 728 568626 - 568640 + g 70 -5.8 -4.45168 | AAAGTTCTTCATATT GATAAT TCT ATTATC TTTATATTTTGCAAA mf2 570157 - 569399 - | putative DNase ( mitogenic factor), phage associated TERM 729 570122 - 570137 + g 79 -5.4 -4.9138 | TAACAGTAAAACAGC GGTAAG CAAA CTTGCC TTTTGTTTAGATAAT pepD 570469 - 571887 + | putative dipeptidase TERM 730 571900 - 571919 + F 100 -10 -5.05782 | opp_overlap 571900 TAATAGTGAAGCTAA GGCTGAGC AACT GCTTAGCC TTTTTTACGATAACT adcA 572039 - 573586 + | putative adhesion protein TERM 731 573601 - 573626 + F 100 -9.1 -5.38054 | opp_overlap 573601 ATCTTAACTCACTAA GCAAATCTTCT TTTA AGGAGGTTTGC TTTTTCTTTGTGGAG SPy_0715 573734 - 574456 + | GntR family transcriptional regulator TERM 732 574583 - 574605 + G 79 -4.8 -5.00884 | opp_overlap 574587, overlap 574603 574604 ATGACGTTTTTTGAA GAAACAAGAG ATT CTCTGGATTC TTTTTTAAAGAGAGT agaS 574475 - 575674 + | putative tagatose-6-phosphate aldose/ketose isomerase TERM 733 575752 - 575734 - T 100 -11 -5.46706 | opp_overlap 575734 AGGTCAAAAGAAAAA CCCTCCTG ATA CAGGAAGG TTTTTTGTATTGTCT TERM 734 575734 - 575752 + T 95 -8.8 -5.53436 | opp_overlap 575734 AGGTCAAAAGAAAAA CCCTCCTG ATA CAGGAAGG TTTTTTGTATTGTCT rpmE2 576031 - 575771 - | 50S ribosomal protein L31 type B SPy_0720 577087 - 576146 - | hypothetical protein TERM 735 576711 - 576723 + g 74 -9.1 -3.49653 | GCAATGATTTCACTT GCGCT AGA AGCGC TTGTGTCCACATAAT SPy_0721 577481 - 577930 + | flavodoxin TERM 736 577947 - 577966 + F 83 -6.4 -4.92239 | ACTATTTAGTAAAAA TGTCAGGG ACTT CCTTGGCA TTTTTAGATTTTTAA SPy_0722 578106 - 578390 + | hypothetical protein SPy_0723 578383 - 579645 + | putative transposase TERM 737 579703 - 579679 - f 93 -9.4 -4.30719 | overlap 579681 TTTTGTTAGAATAAA TCTCGTGTGT AATGG ACACACGAAA ATTACGGCTAATCCG TERM 738 579701 - 579681 - f 75 -9.8 -2.50545 | overlap 579679 TTGTTAGAATAAATC TCGTGTGT AATGG ACACACGA AAATTACGGCTAATC rplS 579760 - 580107 + | 50S ribosomal protein L19 TERM 739 580163 - 580135 - f 100 -14.9 -3.71686 | opp_overlap 580135 580141, overlap 580141 CGTAACGTAATAGAA TAAAAAGACTAGA GTC TCTAGTCTTTTTA TGTCGTCGTGACAAT TERM 740 580135 - 580163 + F 95 -14.9 -2.82635 | opp_overlap 580135 580141, overlap 580141 CGTAACGTAATAGAA TAAAAAGACTAGA GTC TCTAGTCTTTTTA TGTCGTCGTGACAAT TERM 741 580157 - 580141 - f 100 -9.5 -5.29716 | opp_overlap 580135 580141, overlap 580135 GTAATAGAATAAAAA GACTAGA GTC TCTAGTC TTTTTATGTCGTCGT TERM 742 580141 - 580157 + F 100 -9.5 -5.01497 | opp_overlap 580141 580135, overlap 580135 GTAATAGAATAAAAA GACTAGA GTC TCTAGTC TTTTTATGTCGTCGT TERM 743 580437 - 580465 + F 83 -7.6 -4.70613 | opp_overlap 580443, overlap 580443 GTCATTATTGTCACT GAAAAAGCCTTT ACATC AAAGGCTTTTTG TTTTATTCCGGTTTT TERM 744 580459 - 580443 - f 83 -7.3 -4.66163 | opp_overlap 580437 580443 ATTGTCACTGAAAAA GCCTTTA CAT CAAAGGC TTTTTGTTTTATTCC TERM 745 580443 - 580459 + F 89 -6.6 -5.62288 | opp_overlap 580443, overlap 580437 ATTGTCACTGAAAAA GCCTTT ACATC AAAGGC TTTTTGTTTTATTCC SPy_0726 581119 - 581679 + | hypothetical protein TERM 746 582627 - 582617 - g 82 -4 -5.42605 | CTAAGAAAAATAAAA TTCT TAA AGAA AATGAGGACAATTTG gyrB 581680 - 583632 + | DNA gyrase subunit B TERM 747 583701 - 583689 - f 80 -6.3 -4.77157 | overlap 583679 CGAATTGACTAAAAA TCATG ATG CATGA TGCCAACAGCTTTGT TERM 748 583755 - 583787 + F 79 -10.1 -3.33171 | opp_overlap 583757 GGGACAGCGTTAATG CATAGGTATTGAG ACCGCCC CTTAATACCTATG TTAGTCCTTATTAAG SPy_0728 584000 - 585724 + | septation ring formation regulator EzrA TERM 749 585752 - 585734 - T 77 -8.9 -3.63627 | opp_overlap 585734 TTTTGATACTTGAAA GTCGTGA TATTC TCACGAC TTTTTATTAGCTTTT TERM 750 585734 - 585752 + T 95 -8.9 -5.17507 | opp_overlap 585734 TTTTGATACTTGAAA GTCGTGA TATTC TCACGAC TTTTTATTAGCTTTT TERM 751 585877 - 585890 + T 79 -5.3 -5.03747 | opp_overlap 585872, overlap 585871 TTTCAAAAATCTTTT CCAAA AGGA TTTGG TTTTTTCAGGAGTTT SPy_0729 586314 - 585856 - | hypothetical protein eno 586541 - 587848 + | phosphopyruvate hydratase TERM 752 587981 - 588011 + T 93 -14.2 -2.95896 | opp_overlap 587987, overlap 587987 TTAAAGATTAAAGAA TAGAAAGCTTGGGA AAA TCCCAAGCTTTTTG CTTTCTAAATAGTAA TERM 753 588005 - 587987 - T 100 -13.2 -4.41237 | opp_overlap 587987 587981 ATTAAAGAATAGAAA GCTTGGGA AAA TCCCAAGC TTTTTGCTTTCTAAA TERM 754 587987 - 588005 + T 100 -13.2 -5.04601 | opp_overlap 587987, overlap 587981 ATTAAAGAATAGAAA GCTTGGGA AAA TCCCAAGC TTTTTGCTTTCTAAA TERM 755 588140 - 588150 + T 74 -6.8 -4.40572 | opp_overlap 588138 588140 TATATTTTAAATACA GGAC TAA GTCC TTTTATACCAATTGT SPy_0732 588964 - 588374 - | hypothetical protein TERM 756 588413 - 588453 + g 93 -9.8 -5.05505 | AAGGCAATGTCTAGA GGCAATCGTATGTGGCTT GGTTG AAGCTGTTTGCGATTGCC TTTTTCGTTTCTCAT TERM 757 588829 - 588849 + g 71 -6.1 -4.26076 | opp_overlap 588829 TGGCATAGTAGCGAA CCTCTTCTA TCA TCGGAGAGG TTTTCGTAACAGTAA TERM 758 588976 - 588957 - G 77 -10.8 -2.81133 | GATTGACGGATGATA GCTGACAA TGCT TTGTCAGC TAGCTCCAGTACAAA SPy_0733 589264 - 589013 - | hypothetical protein TERM 759 594305 - 594281 - g 76 -2.2 -5.4182 | overlap 594282 AAGGATAAAGAAAAA CTTCTTGC AGAATTGAA GCAAAAAG CAGATGATACTGAAA TERM 760 596314 - 596300 - g 83 -7.2 -4.77438 | overlap 596310 ACTCATGACCAAAAA GTTGAT CAA ATCAAC AAAGTTGAACAAGCT TERM 761 596573 - 596553 - g 72 -4.6 -4.74787 | overlap 596555 ATAAAGACAAACAAA CAGCAGCG GTTGA CGCAGCTA AGAATACAGCAATTG epf 591680 - 597817 + | putative extracellular matrix binding protein TERM 762 597885 - 597860 - f 100 -14.9 -3.59738 | opp_overlap 597860 TACTATATTTTCAAA CCAAGGTGATT TTGA AATCACCTTGG TTTTTTGGATCGTAA TERM 763 597860 - 597885 + F 100 -14.9 -5.1101 | opp_overlap 597860 TACTATATTTTCAAA CCAAGGTGATT TTGA AATCACCTTGG TTTTTTGGATCGTAA sagA 598682 - 598843 + | streptolysin S associated protein TERM 764 598989 - 599035 + F 83 -9.7 -3.74693 | gap 1, opp_overlap 598998, overlap 598990 598992 598994 598998 TCTTGATGCTAACGT C-TCAGGTAATTAGCAGGTACT AGAT AGTACCTGCTAATTACTATATG TTTAGTAAAATGAGA TERM 765 598990 - 599033 + F 95 -13.4 -3.4582 | opp_overlap 598998, overlap 598989 598992 598994 598998 CTTGATGCTAACGTC TCAGGTAATTAGCAGGTACT AGAT AGTACCTGCTAATTACTATA TGTTTAGTAAAATGA TERM 766 598992 - 599031 + F 100 -16 -3.29972 | opp_overlap 598998, overlap 598990 598989 598994 598998 TGATGCTAACGTCTC AGGTAATTAGCAGGTACT AGAT AGTACCTGCTAATTACTA TATGTTTAGTAAAAT TERM 767 598994 - 599029 + F 100 -20.8 -3.21269 | opp_overlap 598998, overlap 598992 598990 598989 598998 ATGCTAACGTCTCAG GTAATTAGCAGGTACT AGAT AGTACCTGCTAATTAC TATATGTTTAGTAAA TERM 768 599025 - 598998 - f 100 -15.8 -3.06133 | opp_overlap 598994 598992 598990 598989 598998 TAACGTCTCAGGTAA TTAGCAGGTACT AGAT AGTACCTGCTAA TTACTATATGTTTAG TERM 769 598998 - 599025 + F 100 -15.8 -3.40082 | opp_overlap 598998, overlap 598994 598992 598990 598989 TAACGTCTCAGGTAA TTAGCAGGTACT AGAT AGTACCTGCTAA TTACTATATGTTTAG sagB 599065 - 600015 + | streptolysin S associated ORF sagC 600012 - 601070 + | streptolysin S associated ORF TERM 770 602076 - 602088 + GF 70 -4.1 -4.81851 | opp_overlap 602054 TGCAAATATTGAATG CGAAG AAC CTTTG TTTTTAGATTTAGAT TERM 771 602335 - 602350 + GF 71 -7.6 -3.67558 | TGGTACGTCACGCGA GTTCTG ATGC CAGAAC TTCTTGAAATGTGTA SPy_0741 601090 - 602448 + | hypothetical protein TERM 772 602928 - 602939 + G 73 -2.2 -5.31877 | TAAATCACTTATTGA TGGG GAAA TCCA TTTTTTATGCTAAGT SPy_0742 602423 - 603094 + | hypothetical protein SPy_0743 603091 - 603774 + | hypothetical protein TERM 773 604160 - 604136 - g 86 -7.3 -5.0538 | opp_overlap 604140 GCTCAGCTTAAAAAA CAAGTTCTAAA AAG TTTAGAATTTG TGGGGCTACACTCCC SPy_0744 603797 - 604720 + | putative ABC transporter ATP-binding protein sagH 604729 - 605856 + | ABC transporter ATP-binding protein SPy_0746 605853 - 606971 + | putative ABC transporter ATP-binding protein TERM 774 607017 - 607055 + F 100 -9.1 -5.00412 | opp_overlap 607010, overlap 607005 TTAGCTAACTACCAG GTAGCCCTTTTATTG GCTTATATG CAATAAAAGGGTTGC TTTTTGCTTATATTT TERM 775 607262 - 607252 - f 79 -4 -5.52986 | opp_overlap 607252 ATGTTATTAAAAAAA GTTT TGA AAAC GTATTTATTTTATGG TERM 776 608765 - 608802 + G 77 -9.9 -3.44848 | overlap 608762 AGGGAAAGATCGTAT CGCGCCAGCCAATATTA TTGA TAATGATGGCTTGCGTG TGTTTGATCCAGAAG TERM 777 609185 - 609164 - g 74 -3.7 -5.05153 | ACCTGAAAAAACAAA CTTGCAAAA AGAC CTTAGCAAG TTAAGCATTGCTTCT TERM 778 609755 - 609775 + G 70 -9.7 -2.66316 | opp_overlap 609760, overlap 609752 609760 CACTTTTAAATCTGA GCAAAGACG TCA CGTCTTGGC TAATATGCTAGCACA SPy_0747 607542 - 610274 + | hypothetical protein SPy_0749 610552 - 611052 + | hypothetical protein TERM 779 611072 - 611093 + F 82 -4.3 -5.57729 | opp_overlap 611072, overlap 611077 GCATCATACTCAAAA GAGTTGGGT CAAT ACCCTTCTC TTTTTTATGTTGTTT ligA 611246 - 613204 + | NAD-dependent DNA ligase LigA SPy_0752 613218 - 614240 + | putative lipid kinase TERM 780 614359 - 614381 + F 88 -7.7 -5.20216 | TCAATTTATTCATAT GAGGGGCCT ATTTG AGGTCTCTC TTTTTTGATCATATG TERM 781 614418 - 614433 + F 74 -5.4 -4.67556 | AATGCCATGTTTTAG GGGTGT TATT ATACCC TTTTTGGAATCTTGT atpE 614633 - 614830 + | F0F1 ATP synthase subunit C TERM 782 615201 - 615211 + G 73 -6.8 -4.21098 | opp_overlap 615201, overlap 615194 TGGACCTCGCCAACA GCCA ATC TGGC TTTTGACCTTGCTCT atpB 614865 - 615581 + | F0F1 ATP synthase subunit A atpF 615599 - 616093 + | F0F1 ATP synthase subunit B atpH 616093 - 616629 + | F0F1 ATP synthase subunit delta atpA 616645 - 618153 + | F0F1 ATP synthase subunit alpha TERM 783 618640 - 618664 + G 72 -4.4 -4.77759 | gap 1, opp_overlap 618640 618641 CAAATCATTTCACAA TC-CGTTGACA TGTT TGTCAATGAGA TTTTTGATGAGTTAT atpG 618169 - 619044 + | F0F1 ATP synthase subunit gamma TERM 784 619067 - 619049 - f 76 -2.5 -5.58179 | gap 1, opp_overlap 619051, overlap 619052 CACTAGAATAAAAAA TAA-CGCT GACT AGCGATTA GGTTATTGTCAGCAT TERM 785 619063 - 619052 - f 81 -5.8 -4.84921 | opp_overlap 619051, overlap 619049 TAGAATAAAAAATAA CGCT GACT AGCG ATTAGGTTATTGTCA atpD 619206 - 620612 + | F0F1 ATP synthase subunit beta atpC 620625 - 621041 + | F0F1 ATP synthase subunit epsilon SPy_0762 621307 - 621564 + | hypothetical protein SPy_0763 621629 - 622900 + | UDP-N-acetylglucosamine 1-carboxyvinyltransferase epuA 622904 - 623092 + | hypothetical protein TERM 786 623089 - 623103 + F 100 -10 -4.8667 | opp_overlap 623089, overlap 623084 TAAATTTACTGGAAA GTAGGC CTT GCCTAC TTTTTATAGCATCTG TERM 787 623103 - 623089 - f 82 -10 -3.62864 | opp_overlap 623084 623089 TAAATTTACTGGAAA GTAGGC CTT GCCTAC TTTTTATAGCATCTG endA 623186 - 623668 + | putative competence associated membrane nuclease TERM 788 623881 - 623921 + F 88 -7.5 -5.14563 | AAAACGGATGGTACC GCGTGTCAACGCTCCGCTT ATC AAGTGGAGGAGTGGCATGC TTTTTTCATCGCCAA pheS 623951 - 624994 + | phenylalanyl-tRNA synthetase subunit alpha TERM 789 625157 - 625184 + F 76 -9.8 -2.91144 | opp_overlap 625156 625150 625147 625159, overlap 625156 GGAAATGACTCAAAT CACGGCTTGAGA GCTT TCTCTAGCCGAG TGATTTGGGCACTAA TERM 790 625182 - 625159 - f 83 -11 -2.96232 | opp_overlap 625157 625156, overlap 625156 625150 625147 AAATGACTCAAATCA CGGCTTGAGA GCTT TCTCTAGCCG AGTGATTTGGGCACT TERM 791 626570 - 626598 + G 75 -10.4 -3.14463 | gap 1, overlap 626573 TAGCTGTTCCTCGGC GTC-GTTGGGATG TTAG CATCCCAGCTGAC TTGGTGGAAGAAATT TERM 792 626573 - 626594 + G 76 -10.9 -2.56596 | overlap 626570 CTGTTCCTCGGCGTC GTTGGGATG TTAG CATCCCAGC TGACTTGGTGGAAGA pheT 625204 - 627609 + | phenylalanyl-tRNA synthetase subunit beta TERM 793 627618 - 627636 + F 95 -6.6 -5.84432 | opp_overlap 627618 627620, overlap 627620 627622 ACGCTAAGAAAAAAA CTGGGCCT CTA AGGCTCCG TTTTTTTCTGTTATA TERM 794 627636 - 627618 - f 91 -4.4 -5.80364 | opp_overlap 627618 627620 627622, overlap 627620 ACGCTAAGAAAAAAA CTGGGCCT CTA AGGCTCCG TTTTTTTCTGTTATA TERM 795 627676 - 627665 - f 79 -4.4 -5.27399 | TAATAGAGGAAAAAA GAAC TCCA GTTC AAATGATTGGAGAAA TERM 796 627753 - 627735 - g 75 -2.5 -5.33405 | gap 1 TGTATCAAACAAAAA TAACAGGC AACC GCCT-TTA CCACACGGTTTCGAA TERM 797 627896 - 627914 + G 85 -8.9 -4.19624 | TACCATCGTCAATTT CAGCAAG ACACA CTTGCTG TTTCTGTTGAGGCTA SPy_0770 627719 - 628096 + | hypothetical protein SPy_0771 628089 - 628475 + | hypothetical protein SPy_0772 628548 - 629624 + | hypothetical protein TERM 798 630224 - 630209 - g 72 -3.2 -5.01858 | overlap 630211 TAAAGAAAAAAACAA GGCCAT TATT ATGGTC ACTCATGATGATCGG SPy_0773 629634 - 630302 + | ABC transporter ATP-binding protein TERM 799 630321 - 630378 + T 84 -11.9 -2.54919 | gap 1, opp_overlap 630337, overlap 630337 ACTGGTAAGAGTTTA TGATA-TTAGAAAAAAACCAAACAAG CACAGCA CTTGTTTGGTTTTTTTCTAAGTGTGA CTATTATCAATACGT TERM 800 630361 - 630337 - T 100 -10.1 -5.69473 | opp_overlap 630337 630321 GATATTAGAAAAAAA CCAAACAAGCA CAG CACTTGTTTGG TTTTTTTCTAAGTGT TERM 801 630337 - 630361 + T 95 -8.7 -5.65177 | opp_overlap 630337, overlap 630321 GATATTAGAAAAAAA CCAAACAAG CACAGCA CTTGTTTGG TTTTTTTCTAAGTGT SPy_0775 631321 - 630404 - | hypothetical protein TERM 802 632024 - 632052 + G 80 -6.1 -4.7657 | opp_overlap 632021 632024 632027 CTTTTAAATAACCAA CTATCAAAAACAG TTG TTGTTATTGATGG TTTTTCACGTTTTTC rexB 631472 - 634687 + | ATP-dependent nuclease subunit B TERM 803 636150 - 636160 + G 81 -6.8 -4.77157 | AGAGGTGTTAAATGT CAGC AAT GCTG TTTTTAGTCACTTAA rexA 634684 - 638316 + | putative ATP-dependent exonuclease, subunit A SPy_0778 638456 - 639268 + | putative ABC transporter (substrate-binding protein) rpsU 639409 - 639585 + | 30S ribosomal protein S21 TERM 804 639627 - 639597 - T 89 -7 -5.31456 | opp_overlap 639602, overlap 639602 CTAATGGATAAAAAA TAAAACAGTTCTCA CAA TTAGAACTGTTTTT ATTTTTTATCCAGAA TERM 805 639602 - 639622 + T 100 -6.9 -5.8096 | opp_overlap 639597 639602 GGATAAAAAATAAAA CAGTTCTCA CAA TTAGAACTG TTTTTATTTTTTATC TERM 806 639622 - 639602 - T 93 -6.9 -5.49579 | opp_overlap 639602, overlap 639597 GGATAAAAAATAAAA CAGTTCTCA CAA TTAGAACTG TTTTTATTTTTTATC TERM 807 639675 - 639696 + T 73 -7.4 -3.86897 | opp_overlap 639675 TTGATATCAAAAAAA GTAGTTAG ACATGC CTAACTAC TTTATCAAAAATCGC TERM 808 639696 - 639675 - T 93 -8.1 -5.58454 | opp_overlap 639675 TTGATATCAAAAAAA GTAGTTAGA CATG CCTAACTAC TTTATCAAAAATCGC mscL 640075 - 639713 - | putative large conductance mechanosensitive channel TERM 809 639765 - 639778 + g 80 -4.5 -5.18355 | AATTCTTCTTGAGTA GGAGC TGCA GCTTC TTTTTCCTTTTTAGG dnaG 640206 - 642020 + | DNA primase rpoD 642029 - 643138 + | RNA polymerase sigma factor RpoD TERM 810 643131 - 643165 + F 89 -10.8 -3.53031 | opp_overlap 643132 643135 643141, overlap 643132 643134 643141 TAAGAGACTTTATAG AGGACTAAAATCGTCC AGT GGACGATTTTAGGTCG TTCCTTTGAAATAAG TERM 811 643164 - 643132 - f 84 -12.1 -2.91507 | opp_overlap 643131 643132 643134 643141, overlap 643135 643141 AAGAGACTTTATAGA GGACTAAAATCGTCC AGT GGACGATTTTAGGTC GTTCCTTTGAAATAA TERM 812 643132 - 643164 + F 93 -14.3 -2.71497 | opp_overlap 643132 643135 643141, overlap 643131 643134 643141 AAGAGACTTTATAGA GGACTAAAATCGTCC AGT GGACGATTTTAGGTC GTTCCTTTGAAATAA TERM 813 643134 - 643162 + F 87 -13.3 -2.89837 | opp_overlap 643132 643135 643141, overlap 643132 643131 643141 GAGACTTTATAGAGG ACTAAAATCGTCC AGT GGACGATTTTAGG TCGTTCCTTTGAAAT TERM 814 643161 - 643135 - f 100 -16.8 -2.69977 | opp_overlap 643134 643132 643131 643141, overlap 643132 643141 AGACTTTATAGAGGA CTAAAATCGTCC AGT GGACGATTTTAG GTCGTTCCTTTGAAA TERM 815 643155 - 643141 - f 100 -10 -4.34345 | opp_overlap 643134 643132 643131 643141, overlap 643135 643132 TATAGAGGACTAAAA TCGTCC AGT GGACGA TTTTAGGTCGTTCCT TERM 816 643141 - 643155 + F 93 -10 -4.24294 | opp_overlap 643141 643135 643132, overlap 643134 643132 643131 TATAGAGGACTAAAA TCGTCC AGT GGACGA TTTTAGGTCGTTCCT TERM 817 643413 - 643438 + G 72 -8.5 -3.57883 | gap 1, opp_overlap 643421 CAAGATCAGGTGATA GCTATCAAGAAT AGA ATTCTTGA-AGC TTTAGAAACTGTTAT SPy_0783 643374 - 643712 + | hypothetical protein TERM 818 644342 - 644320 - g 73 -10 -2.91695 | overlap 644317 GGTATTTGGAAATTA TGGTAAAAAC TTT GTCTTTACCA TGGAGCAGTTAGCAG rmlD 643850 - 644704 + | putative dTDP-4-keto-L-rhamnose reductase TERM 819 644740 - 644717 - f 100 -9.6 -4.64598 | opp_overlap 644717 TAAGTATTCTAAAAA GAGTTGGCTT TCTA AGGCCAACTC TTTTTCATGGGTTTA TERM 820 644717 - 644740 + F 100 -11.8 -4.78764 | opp_overlap 644717 TAAGTATTCTAAAAA GAGTTGGCTT TCTA AGGCCAACTC TTTTTCATGGGTTTA TERM 821 645855 - 645831 - g 70 -3.5 -4.90266 | opp_overlap 645846 TGGACCAAGCAAAAA GGGCAATTAGC AGA GCTGATTAACC AAGTTGATGCAGGTT rgpAc 644823 - 645977 + | hypothetical protein rgpBc 645967 - 646899 + | alpha-L-Rha alpha-1,3-L-rhamnosyltransferase rgpCc 646944 - 647705 + | ABC-transporter permease TERM 822 648494 - 648480 - g 70 -2.8 -5.055 | TGAATGCTGAAAAAA TATCTG TAT CTGATA TTGCCAAAGATTTGA rgpDc 647705 - 648910 + | ABC transporter ATP-binding protein rgpEc 648935 - 649942 + | glycosyltransferase TERM 823 651300 - 651290 - g 74 -4 -5.05153 | ATGTTAAAAAACAAA TTGA TTT TCAA GCTATGGATACATTT rgpFc 649939 - 651684 + | hypothetical protein TERM 824 651825 - 651837 + G 74 -4.9 -4.77775 | GTAAACTATTATGCT CATTT ACT AAATG TTTCTTTTGTGGGAT SPy_0793 651681 - 654155 + | hypothetical protein TERM 825 654808 - 654824 + G 76 -6.6 -4.33105 | opp_overlap 654807 CTAAGGTTAATTGAC CGTTCA TTGAT TGAACG TTTTGCTAATCATTA SPy_0794 654334 - 655029 + | putative glycosyl transferase SPy_0796 655031 - 655372 + | hypothetical protein SPy_0797 655365 - 656651 + | hypothetical protein SPy_0798 656632 - 658128 + | hypothetical protein TERM 826 658180 - 658142 - f 79 -10.6 -2.91467 | opp_overlap 658142 AAACTCTTAATTAGA GGCTTTAAAAAACTTA GCTTGAA TAAGTATTTTAAAGCC TTTTATGCTATAATT TERM 827 658142 - 658180 + F 100 -10.6 -4.5265 | opp_overlap 658142 AAACTCTTAATTAGA GGCTTTAAAAAACTTA GCTTGAA TAAGTATTTTAAAGCC TTTTATGCTATAATT pepT 658222 - 659445 + | peptidase T SPy_0800 659486 - 659974 + | putative pore-forming peptide TERM 828 659978 - 659957 - T 85 -6.6 -5.32882 | opp_overlap 659957 CAGCATGATAAAAAA GCCCTTAC TCGAGG GTAAGAGC TTTAGTTGGGCAAGA SPy_0801 660158 - 659961 - | ferredoxin SPy_0802 660207 - 660683 + | hypothetical protein TERM 829 660784 - 660752 - g 70 -9.3 -3.18433 | opp_overlap 660750 660753 660755, overlap 660750 660755 AGTGGAAAAAGTACA GTAGCCAAGATTATT GCA AAAAATCTTGGCTAT ACTTATCTAGATACT TERM 830 660753 - 660783 + G 83 -12.8 -2.89793 | opp_overlap 660752 660750 660755, overlap 660750 660755 GTGGAAAAAGTACAG TAGCCAAGATTATT GCA AAAAATCTTGGCTA TACTTATCTAGATAC TERM 831 660781 - 660755 - g 77 -11 -2.78025 | opp_overlap 660753 660750 660755, overlap 660752 660750 GGAAAAAGTACAGTA GCCAAGATTATT GCA AAAAATCTTGGC TATACTTATCTAGAT TERM 832 660755 - 660781 + G 78 -11 -2.99717 | opp_overlap 660755 660752 660750, overlap 660753 660750 GGAAAAAGTACAGTA GCCAAGATTATT GCA AAAAATCTTGGC TATACTTATCTAGAT cmk 660698 - 661378 + | cytidylate kinase TERM 833 661483 - 661516 + F 81 -5.9 -4.96848 | overlap 661451 661447 661488 TCCTATGGAATATTA TGTGTGCGGGCTTGA TTTA TCAAGTCCGCTTTCG TTTTTCTCTAAAAAA TERM 834 661488 - 661511 + F 100 -13.2 -4.40526 | overlap 661451 661447 661483 TGGAATATTATGTGT GCGGGCTTGA TTTA TCAAGTCCGC TTTCGTTTTTCTCTA infC 661540 - 662070 + | translation initiation factor IF-3 rpmI 662112 - 662309 + | 50S ribosomal protein L35 rplT 662368 - 662727 + | 50S ribosomal protein L20 TERM 835 662774 - 662748 - T 100 -9.7 -5.1287 | opp_overlap 662751 GCTATACCTAAAAAA TAACTTTCTAT TACCT ATAGAAAGTTA TAAAGAAACAAAAAT TERM 836 662793 - 662811 + T 85 -6.7 -5.22006 | opp_overlap 662793 662796 662801, overlap 662801 662808 AGAAACAAAAATGAA GGAGACG ATGGA CGTCTTC TTTTTATTATACTCA TERM 837 662808 - 662842 + T 79 -8.9 -3.7229 | opp_overlap 662793 662801, overlap 662793 662801 GGAGACGATGGACGT CTTCTTTTTATTATA CTCAA TATAATAAAAAGCAG TTTCCCATGTTTTAT TERM 838 662997 - 662974 - T 100 -11.2 -5.45652 | opp_overlap 662977 ATCGCCAATAAAAAA GAAGCAAAAT TATT ATTTTGCTTC TAGTCAGATCATTAA SPy_0807 665228 - 663018 - | hypothetical protein TERM 839 663176 - 663191 + g 71 -6.2 -4.23486 | overlap 663189 CTGATCCGAGTTTTG CTGAAA TATC TTTCAG TTGTTTTAACTGCTT TERM 840 665450 - 665434 - g 100 -5.1 -5.75822 | overlap 665435 TATAAAGGAAAAAAA TCAGTTG GTT CAACTGG TGACCAAGTCCAATC TERM 841 665449 - 665435 - g 79 -8.6 -4.03053 | overlap 665434 ATAAAGGAAAAAAAT CAGTTG GTT CAACTG GTGACCAAGTCCAAT SPy_0808 665336 - 666499 + | hypothetical protein aroD 666496 - 667182 + | 3-dehydroquinate dehydratase TERM 842 668153 - 668142 - g 70 -5.8 -4.41348 | opp_overlap 668142 668141 TGGTCGTCAAACAAA CCAC TTAG GTGG CTTTGAAGGTGGCAT aroF 667276 - 668442 + | chorismate synthase SPy_0811 668503 - 668844 + | hypothetical protein TERM 843 668867 - 668894 + F 74 -3.5 -5.34055 | gap 1 AAGATAGGAAAAAAA CAGATTGCTGGC AGCTC GTCAG-GATCTG TTTTTTAGTGTTTAT TERM 844 669480 - 669494 + G 73 -5.7 -4.62302 | ATATTTTGATTGCTA CAGGA GGACA TCCTG TTTTTCCAGATATTG gor 669065 - 670417 + | glutathione reductase TERM 845 670444 - 670489 + T 83 -4.9 -5.4833 | gap 1, opp_overlap 670445, overlap 670445 TAAGGCAATAAAAAA TGATGTTAACAGTTTTTGAGGA AAG TCTTCTA-AACTGCTAGCATCG TTTTTTGTTAGGTGA folC.2 671773 - 670505 - | putative folyl-polyglutamate synthetase SPy_0815 672243 - 671803 - | hypothetical protein TERM 846 672197 - 672213 + g 70 -2.9 -5.06414 | overlap 672185 TGCTCGGTAGGGACA CCTCCTG ATT TACGAGG TTTTTGTTGACGGGA TERM 847 672597 - 672607 + G 71 -6.8 -4.11484 | opp_overlap 672597 CCAATTAGGGACAAA TGCG TCT CGCA TTTTAGAAGCTTCCC SPy_0816 672478 - 673599 + | putative iron-sulfur cofactor synthesis protein thiI 673633 - 674847 + | thiamine biosynthesis protein ThiI TERM 848 674901 - 674914 + G 72 -3.1 -5.15634 | gap 1, opp_overlap 674901 674902, overlap 674903 TGATACTATTGAAAA GCCTCT ATA AG-GGC TTTTTTGCTGCAATG TERM 849 675105 - 675091 - g 95 -8.6 -5.40072 | overlap 675094 TGGGGTTCAAAAAAA TGAGCT AGC AGCTCA AAAATCTGCTCAGCC TERM 850 675662 - 675647 - g 71 -4 -4.94703 | overlap 675648 AAGATAAAAAAAGAA CTTCAG CTAG CTGAAA AAAAGGCTGACGTGA SPy_0818 674885 - 676177 + | hypothetical protein TERM 851 676292 - 676278 - f 79 -8.6 -3.74747 | GTAACGTTGACTAAA TGCACA TCC TGTGCA ACCGCGCGAAAATCG TERM 852 676618 - 676603 - g 87 -6.2 -5.19998 | ACAAGGAAAACAAAA GAAAGT TGTA ACTTTC AAATACAAACCTAAA rplU 676391 - 676705 + | 50S ribosomal protein L21 SPy_0821 676717 - 677043 + | hypothetical protein rpmA 677071 - 677364 + | 50S ribosomal protein L27 TERM 853 677386 - 677413 + F 100 -8.4 -6.11229 | opp_overlap 677388, overlap 677387 677388 AACATCGCATTATAT AAGGCTTTCCAG GTGT CTGGAAAGCCGA TTTTTTTATTTTGCT TERM 854 677387 - 677412 + F 100 -11.9 -4.23077 | opp_overlap 677388, overlap 677386 677388 ACATCGCATTATATA AGGCTTTCCAG GTGT CTGGAAAGCCG ATTTTTTTATTTTGC TERM 855 677411 - 677388 - f 100 -15.4 -3.54951 | opp_overlap 677388 677387 677386 CATCGCATTATATAA GGCTTTCCAG GTGT CTGGAAAGCC GATTTTTTTATTTTG TERM 856 677388 - 677411 + F 100 -15.4 -3.11406 | opp_overlap 677388, overlap 677387 677386 CATCGCATTATATAA GGCTTTCCAG GTGT CTGGAAAGCC GATTTTTTTATTTTG TERM 857 677884 - 677898 + G 78 -4.2 -5.24129 | opp_overlap 677877 677875, overlap 677877 CAGGAACAGTCTTGA CAAGTC AAG GACTAG TTTTTTATGAGAAAG SPy_0824 677712 - 678626 + | putative capsular polysaccharide biosynthesis protein TERM 858 678793 - 678808 + G 70 -5.4 -4.35483 | overlap 678788 678786 CTTTTCCATATTGCA GGACCA GCAA TGGTTC TTTGTTGTCATAACG lsp 678623 - 679081 + | putative prolipoprotein signal peptidase SPy_0827 679071 - 679961 + | hypothetical protein TERM 859 680274 - 680264 - f 74 -5.4 -4.76041 | GAGACGGATTAAAAA CATG CAT CATG ATACTTAATTGTGCT TERM 860 680301 - 680324 + F 90 -8.2 -5.34381 | overlap 680303 TGCTATATTTTGCTG AATCTCCTTG TTTC CAAGGAGATC TTTTTATTTGAATTT TERM 861 680303 - 680322 + F 100 -10.8 -4.2793 | overlap 680301 CTATATTTTGCTGAA TCTCCTTG TTTC CAAGGAGA TCTTTTTATTTGAAT TERM 862 680611 - 680575 - g 77 -11 -2.87881 | opp_overlap 680583 680585, overlap 680580 CAAGCCTTTTAGAGA TGACATGAGAGTTGAG GAAGA CACAACTCTGATGTCA GTAGATATTACAGGC pyrR 680357 - 680878 + | pyrimidine regulatory protein PyrR pyrP 680894 - 682153 + | putative uracil permease pyrB 682214 - 683149 + | aspartate carbamoyltransferase catalytic subunit TERM 863 683995 - 683983 - g 77 -7.7 -4.14472 | opp_overlap 683992 CTAAGACTTGTAAAA TGACC TTT GGTCA TCGTGGCTTTAACCA carA 683193 - 684275 + | carbamoyl phosphate synthase small subunit TERM 864 684538 - 684552 + G 73 -7.8 -3.9461 | AAAAAATCATGGTTA TCGGGT CTG GCCCGA TTATTATTGGACAAG TERM 865 687136 - 687161 + G 71 -5.3 -4.54727 | opp_overlap 687116 TTTATCCCCAAAGTC CACTGGTGCAT ATCA AAGCGCCTGTG TTTTCATTTACAAAG carB 684501 - 687677 + | carbamoyl phosphate synthase large subunit TERM 866 687715 - 687690 - f 100 -10.7 -5.85011 | opp_overlap 687690, overlap 687705 687707 TAAAAATTAAAAAAA TCATTTTTAAG AAAA CTTAAAAATGA TTTTTTTAGATTATA TERM 867 687690 - 687715 + F 100 -10.7 -5.55698 | opp_overlap 687690 687705 687707 TAAAAATTAAAAAAA TCATTTTTAAG AAAA CTTAAAAATGA TTTTTTTAGATTATA TERM 868 688435 - 688414 - g 72 -9.5 -2.974 | overlap 688411 GCAAGATTTAAATGA TGCTTATGC AGAT GCACAAGCA GAAGTAAATAAAGCG SPy_0836 687884 - 689155 + | hypothetical protein SPy_0837 689179 - 689865 + | ABC transporter ATP-binding protein SPy_0838 689877 - 691097 + | ABC transporter permease TERM 869 691277 - 691308 + F 73 -8.8 -3.29511 | overlap 691278 AGTGATACATCTCTT ATTTCTAGCTGAAC TTCG GTTCGGCTAGGAAG TTGTCAGGCAATGAG TERM 870 691278 - 691307 + F 86 -12.3 -2.57564 | overlap 691277 GTGATACATCTCTTA TTTCTAGCTGAAC TTCG GTTCGGCTAGGAA GTTGTCAGGCAATGA SPy_0839 691351 - 693084 + | putative glycerophosphodiester phosphodiesterase TERM 871 693132 - 693086 - f 95 -12.6 -3.73224 | opp_overlap 693075 693087 693094 693098, overlap 693087 693098 GTAGTCTTTATTAAA GGTTTAAGGAAAGTGTCAAG AAAAAAA CTTGACACTTTCTTTAAACT GAGTTATACTGTTTA TERM 872 693131 - 693087 - f 100 -16.1 -2.8372 | opp_overlap 693087 693094 693098, overlap 693086 693098 TAGTCTTTATTAAAG GTTTAAGGAAAGTGTCAAG AAAAAAA CTTGACACTTTCTTTAAAC TGAGTTATACTGTTT TERM 873 693087 - 693131 + F 100 -18.3 -2.63636 | opp_overlap 693087 693086 693098, overlap 693094 693098 TAGTCTTTATTAAAG GTTTAAGGAAAGTGTCAAG AAAAAAA CTTGACACTTTCTTTAAAC TGAGTTATACTGTTT TERM 874 693094 - 693124 + F 95 -12.8 -3.62418 | opp_overlap 693087 693086 693098, overlap 693087 693098 TATTAAAGGTTTAAG GAAAGTGTCAAG AAAAAAA CTTGACACTTTC TTTAAACTGAGTTAT TERM 875 693120 - 693098 - f 76 -7.8 -3.922 | opp_overlap 693094 693087 693098, overlap 693087 693086 AAAGGTTTAAGGAAA GTGTCAAG AAAAAAA CTTGACAC TTTCTTTAAACTGAG TERM 876 693098 - 693120 + F 81 -7.8 -4.44046 | opp_overlap 693098 693087 693086, overlap 693094 693087 AAAGGTTTAAGGAAA GTGTCAAG AAAAAAA CTTGACAC TTTCTTTAAACTGAG rpsP 693211 - 693483 + | 30S ribosomal protein S16 SPy_0841 693493 - 693732 + | RNA binding protein TERM 877 693758 - 693782 + F 100 -15.9 -4.65895 | opp_overlap 693758 693778 693781, overlap 693781 GAGATGGATTGAAAA GCTTGTTGACT TAA AGTCAACAAGC TTTTTGAATAGCAAA TERM 878 693782 - 693758 - f 100 -15.9 -4.20531 | opp_overlap 693758 693781, overlap 693778 693781 GAGATGGATTGAAAA GCTTGTTGACT TAA AGTCAACAAGC TTTTTGAATAGCAAA TERM 879 694027 - 694062 + F 100 -18 -4.40333 | opp_overlap 694038, overlap 694017 CAGTTTTTTGGGGGG CATTCCTAAAATTAAG TATA CTTAATTTTAGGAATG TTTATATTCTTTACA TERM 880 694196 - 694186 - f 73 -4 -5.20216 | opp_overlap 694186 TATACGATCAAAAAA GTTA GAG TAAC TTTATAAAACAGTGG TERM 881 694303 - 694261 - f 80 -5 -5.28778 | opp_overlap 694292, overlap 694292 ATTATCTATAAAAAA TCCCAAAAGTAGTTTGTT TCCAGTT AATGAACTTCTTTTGGGA AGGCTTTTTTGCTGA SPy_0843 694643 - 697669 + | hypothetical protein SPy_0844 697689 - 698090 + | hypothetical protein TERM 882 698192 - 698138 - T 100 -16.8 -5.12707 | opp_overlap 698141 698189 TTAAACGCTAAAAAA CAAGCATACTCTTTTTTACAGCATAG TGA CTATGTTGTAAAAAGGGGTATGCTTA TTAGGTGCTCTTAAT TERM 883 698141 - 698189 + T 100 -22.9 -3.70511 | opp_overlap 698138 AACGCTAAAAAACAA GCATACTCTTTTTTACAGCATAG TGA CTATGTTGTAAAAAGGGGTATGC TTATTAGGTGCTCTT czcD 699145 - 698270 - | putative cation-efflux system membrane protein TERM 884 698586 - 698566 - G 86 -4.7 -5.48825 | opp_overlap 698567, overlap 698567 CACCATCTAAAAAAA TGTTAGCAG TTG CTACTAACT TTGGAAGAGCTTTAG TERM 885 698585 - 698567 - G 73 -8.2 -3.8821 | opp_overlap 698567, overlap 698566 ACCATCTAAAAAAAT GTTAGCAG TTG CTACTAAC TTTGGAAGAGCTTTA SPy_0846 699281 - 699802 + | hypothetical protein rimM 700017 - 700535 + | 16S rRNA-processing protein TERM 886 700675 - 700654 - g 91 -9.5 -4.60487 | GATTATGCTGAAAAA GCTCGTCAT GTGG ATGACGAAC CCTATGGTGGGGGCC TERM 887 700813 - 700834 + G 93 -6.7 -5.40464 | opp_overlap 700813, overlap 700804 GCTTATGCTGAAGAA TTAGCTCTT GAGG AAGAGTTAA TTTTTATTTGTGGTC trmD 700525 - 701256 + | tRNA (guanine-N(1)-)-methyltransferase TERM 888 701527 - 701551 + G 72 -4.3 -4.74103 | opp_overlap 701526 701524 701530, overlap 701528 701530 TAAAAGAAGAAGTAT TAACCTTTGAC AAG GTTAAAGGTGG TTTTTCGATTAGGAC SPy_0850 701256 - 702248 + | putative thioredoxin reductase TERM 889 703029 - 703051 + G 76 -9.2 -3.76641 | CTTATCATTGTTAGT CCGATTTCAA CTG TTGCAATCGG TTTAGCTATTGGGCT SPy_0851 702426 - 703484 + | regulatory protein apbA 703497 - 704420 + | 2-dehydropantoate 2-reductase TERM 890 704440 - 704471 + F 100 -9.6 -5.58179 | TATCAAATCGTTATA CTCAATATTATGGC TAAA GCTTTAATATTGAG TTTTTTGTTATGCTG SPy_0853 704676 - 705389 + | putative transcriptional repressor fruB 705386 - 706297 + | putative fructose-1-phosphate kinase SPy_0855 706294 - 708240 + | PTS system, fructose-specific IIABC component TERM 891 708269 - 708290 + F 90 -8.1 -5.23316 | opp_overlap 708269 TTTTTCTTACTAAAA CTAGAATCT GTCA AGGTTCTAG TTTTTTGCTATACTA mur1.1 708333 - 708932 + | putative peptidoglycan hydrolase mur1.2 709084 - 709791 + | putative peptidoglycan hydrolase TERM 892 709857 - 709889 + T 100 -19.5 -4.74084 | opp_overlap 709857 709882 TCTATTTTAAGTAAA GGATTTAGTTCTGTA TTG TACAGAACTAAATCC TTTTAGTTTTACTTT TERM 893 709889 - 709857 - T 100 -19.5 -3.91911 | opp_overlap 709857, overlap 709882 TCTATTTTAAGTAAA GGATTTAGTTCTGTA TTG TACAGAACTAAATCC TTTTAGTTTTACTTT TERM 894 710560 - 710578 + T 71 -3.2 -5.093 | overlap 710561 TAGTCAAATAAATTT CTTTTGAT TCC ATCAAAAA TTTTCTTATTTTAAA SPy_0861 711766 - 710747 - | hypothetical protein TERM 895 711046 - 711074 + g 100 -6.1 -5.95539 | CTTCGGTTAACTCTT TCTTAATGAGATC ACT GATTTCTTTGAGA TTTTTTTCTTTAAAA TERM 896 712066 - 712047 - H 100 -6.4 -6.04953 | opp_overlap 712046 712049 AGACAAATAAAAAAA GACCTCAT CCAG AAGAGGTC GTGTATAACTGGGGA TERM 897 712479 - 712490 + H 78 -2.2 -5.59357 | GGTGCAGTACAAGAC CACT AACG GGTG TTTTTTTGGTATAAT SPy_0864 712669 - 713049 + | hypothetical protein SPy_0865 713049 - 713897 + | hypothetical protein TERM 898 714063 - 714035 - f 81 -11.1 -2.91027 | opp_overlap 714039, overlap 714028 714038 714039 GTATGAAATTAATGA CAATGCCTTCTGA GTT TCAGAAGGCTTTA CCCATATTGACTAAA TERM 899 714060 - 714038 - g 82 -10.6 -3.58914 | opp_overlap 714039, overlap 714035 714028 714039 TGAAATTAATGACAA TGCCTTCTGA GTT TCAGAAGGCT TTACCCATATTGACT TERM 900 714039 - 714059 + G 100 -14.1 -3.6106 | opp_overlap 714039 714038 714035 714028 GAAATTAATGACAAT GCCTTCTGA GTT TCAGAAGGC TTTACCCATATTGAC TERM 901 714059 - 714039 - g 93 -14.1 -2.74625 | opp_overlap 714039, overlap 714038 714035 714028 GAAATTAATGACAAT GCCTTCTGA GTT TCAGAAGGC TTTACCCATATTGAC papS 714037 - 715230 + | tRNA CCA-pyrophosphorylase SPy_0867 715227 - 717104 + | putative ABC transporter ATP-binding protein TERM 902 717175 - 717157 - f 82 -7.4 -4.46621 | GATAATAGAAAAGAA GGGCTC TTGCACT GAGCCC CAAAAGTTGGCTACT TERM 903 717199 - 717243 + F 77 -5.1 -5.13722 | opp_overlap 717205, overlap 717197 717200 717205 717241 717242 GGCTACTCTATTTGA AGTAAAGGATTTAGTTCTGTG TTG TAGAGGACTAAGTCCTTTTCG TTTTATTTTAATACG TERM 904 717200 - 717242 + F 77 -8.6 -3.67149 | opp_overlap 717205, overlap 717197 717199 717205 717241 GCTACTCTATTTGAA GTAAAGGATTTAGTTCTGTG TTG TAGAGGACTAAGTCCTTTTC GTTTTATTTTAATAC TERM 905 717205 - 717237 + F 88 -7.1 -4.83677 | opp_overlap 717205, overlap 717197 717200 717199 TCTATTTGAAGTAAA GGATTTAGTTCTGTG TTG TAGAGGACTAAGTCC TTTTCGTTTTATTTT TERM 906 717349 - 717364 + F 77 -3.3 -5.55695 | AGAACTCGTCTTTGT CCATT CTTTAT AATGG TTTTTTGTCTTCTTC TERM 907 717403 - 717416 + F 74 -2.3 -5.42259 | opp_overlap 717403 GATGCTTCTTTCAAA CGGAG TTCC CTCGG TTTTTTTAGCGCTAA TERM 908 717468 - 717513 + F 100 -16.4 -3.80625 | opp_overlap 717471, overlap 717471 717473 CTTAATGTCATACAA AAACACCCCAAACGTTAGAT TTTTTT ATCTAACGTTTGGGGTGTAG TTTACATTATGGCGC TERM 909 717471 - 717510 + F 100 -22.5 -2.98778 | opp_overlap 717471, overlap 717468 717473 AATGTCATACAAAAA CACCCCAAACGTTAGAT TTTTTT ATCTAACGTTTGGGGTG TAGTTTACATTATGG TERM 910 717510 - 717471 - f 100 -22.5 -4.98522 | opp_overlap 717468 717471 717473 AATGTCATACAAAAA CACCCCAAACGTTAGAT TTTTTT ATCTAACGTTTGGGGTG TAGTTTACATTATGG TERM 911 717473 - 717508 + F 100 -19.3 -3.04183 | opp_overlap 717471, overlap 717471 717468 TGTCATACAAAAACA CCCCAAACGTTAGAT TTTTTT ATCTAACGTTTGGGG TGTAGTTTACATTAT fms 717997 - 718407 + | peptide deformylase TERM 912 718415 - 718435 + T 79 -4 -5.40072 | opp_overlap 718415 TAATTTAACAAAAAA CCTAGAGT AGGAC GCTTTAGG TTTTTTTGGCAAAGA TERM 913 718425 - 718415 - T 84 -5.4 -5.5074 | opp_overlap 718415 TAATTTAACAAAAAA CCTA GAG TAGG ACGCTTTAGGTTTTT SPy_0872 720501 - 718489 - | 5'-nucleotidase TERM 914 718965 - 718951 - G 71 -5 -4.59944 | opp_overlap 718955, overlap 718952 718953 ACCACCATAAAGAAA GTCGTT GAC AACAAC GGTGTAAGTAGTTGT TERM 915 720639 - 720620 - H 77 -5.8 -4.69027 | AAAGCGATTTAAAAA CAAACGAT ACAG ATCATTTG AAGTTATATAGTTAG SPy_0873 720721 - 721371 + | GTP pyrophosphokinase TERM 916 721431 - 721401 - g 85 -11.2 -3.37245 | opp_overlap 721429 TTAGCTGAAGACGAA TGGCAGATGTCTAA TGT TTTGACAACTGCCA TGACTCATCAAGGTT SPy_0874 721374 - 722042 + | putative two-component response regulator TERM 917 722214 - 722204 - g 70 -5.4 -4.41616 | ATTTCCTCAAATAAA GGTA AAT TACC TGGCACTACGGAAAG SPy_0875 722051 - 723283 + | putative two-component sensory transduction histidine kinase TERM 918 723350 - 723366 + F 100 -9.4 -4.71482 | opp_overlap 723353 ATAAACGATGCTTAA CCAGCC CATGA GGCTGG TTTTTAACGTTTAAT mvaK1 723562 - 724455 + | mevalonate kinase mvaD 724437 - 725381 + | mevalonate pyrophosphate decarboxylase mvaK2 725374 - 726381 + | phosphomevalonate kinase SPy_0879 726374 - 727363 + | isopentenyl pyrophosphate isomerase TERM 919 727573 - 727530 - T 100 -11.3 -4.63044 | gap 1, opp_overlap 727537, overlap 727537 ATGTATAGAAATAAA GATTAAACACCCATGTAAAC CAATT GTTTACATGGGTGTTTG-CC TTATATTAGTTGTTT TERM 920 727537 - 727567 + T 100 -17.1 -3.85509 | opp_overlap 727537 727530 GAAATAAAGATTAAA CACCCATGTAAAC CAATT GTTTACATGGGTG TTTGCCTTATATTAG TERM 921 727567 - 727537 - T 100 -17.1 -4.10269 | opp_overlap 727537, overlap 727530 GAAATAAAGATTAAA CACCCATGTAAAC CAATT GTTTACATGGGTG TTTGCCTTATATTAG mvaS.1 728870 - 727593 - | putative 3-hydroxy-3-methylglutaryl-coenzyme A TERM 922 728115 - 728140 + g 90 -8.3 -5.05782 | overlap 728117 CCGGTAAGGATCTAC TTGAGCTAGTC GGCT GGCTAGCTCTA TTTTTTGAGCTAACT TERM 923 728117 - 728138 + g 90 -10.9 -4.15748 | overlap 728115 GGTAAGGATCTACTT GAGCTAGTC GGCT GGCTAGCTC TATTTTTTGAGCTAA TERM 924 728443 - 728457 + g 85 -2.8 -5.86976 | overlap 728441 GGATAAGCTTTATTT GCCAAT GCA ATTAGC TTTTTTGTTTTATGA TERM 925 728815 - 728827 + g 71 -4.1 -4.86731 | TCGATAAGTTGGAGG CGTTC TTC GAATG TTTTCTTTGAAAAAC mvaS.2 730032 - 728857 - | putative 3-hydroxy-3-methylglutaryl-coenzyme A synthase (HMG-CoA synthase) TERM 926 729227 - 729255 + g 100 -14.1 -4.74453 | opp_overlap 729227 729231 ATTTGTTTGCTATAA CTAATAGAAGCTT GAA AGGCTTCTATTAG TTTTTCCCTGTGTTC TERM 927 729255 - 729227 - G 86 -11.9 -3.28791 | opp_overlap 729227, overlap 729231 ATTTGTTTGCTATAA CTAATAGAAGCTT GAA AGGCTTCTATTAG TTTTTCCCTGTGTTC thyA 730241 - 731080 + | thymidylate synthase dyr 731160 - 731657 + | putative dihydrofolate reductase SPy_0884 731677 - 731847 + | hypothetical protein TERM 928 732331 - 732309 - g 70 -5.7 -4.42386 | gap 1, opp_overlap 732294 TGTGGATTTACAAAA GTCCAA-CAT TTTG ATGATTGGAC CAACAGGTTCAGGAA TERM 929 732663 - 732635 - g 70 -9 -3.1706 | gap 2 AAGGTACGGTAGCAA GTG-TTCC-CCCAC AAG GTGGGCGGAAGCAC CCTAATCAAGAAATG clpX 731977 - 733206 + | ATP-dependent protease ATP-binding subunit SPy_0886 733216 - 733815 + | GTPase EngB TERM 930 733845 - 733862 + F 76 -4.1 -5.18726 | TTATCTATGCTAAAA CATTCTC AGTA GAGGGTG TTTTTCTTATCGAAA SPy_0887 733963 - 734706 + | hypothetical protein TERM 931 734691 - 734723 + T 74 -3.3 -5.36314 | opp_overlap 734691 AGCGCTAAAAAAAAG TCCGTCAAGTGTATA ACG TAGTCACAAGACGGA TTTTTTCATGTTTTG clpL 736863 - 734764 - | putative ATP-dependent Clp proteinase (ATP-binding subunit) TERM 932 734800 - 734817 + g 75 -2.7 -5.1925 | overlap 734794 734801 CACTAGTTGTCCTTC TTTTAGG ATTG CCTGAAG TTTTTTGACTTCTGG TERM 933 737576 - 737559 - g 74 -4.2 -5.17576 | TACTAATGGAAAAAA TTGTTG CAACAC CAACAA AAGAATACATCTGGG rpiA 737243 - 737926 + | ribose-5-phosphate isomerase A TERM 934 738042 - 738077 + G 71 -7 -4.03141 | gap 1 TTGGTTGTTTTAGAC TCTGTCGGTAT-TGGTG CAG CACCAGATGCTGACAAA TTCTTTAATGCTGGT TERM 935 738219 - 738208 - g 72 -4.4 -4.8083 | CAATACCACTAAAAA CTGT TCCA ACAG AAGACAATCCTACTG deoB 738003 - 739214 + | phosphopentomutase arsC 739233 - 739673 + | putative arsenate reductase punA 739657 - 740466 + | purine nucleoside phosphorylase deoD2 741129 - 741842 + | putative purine nucleoside phosphorylase TERM 936 741877 - 741851 - g 83 -8.9 -4.09805 | gap 1, opp_overlap 741850 741854 741856 741858, overlap 741854 741856 TGACTAATAATCAAA CACTAGACATCC TTTT GGATGTCTA-TG CTTATAATCACGCCT TERM 937 741875 - 741854 - g 81 -11.7 -2.77051 | opp_overlap 741850 741854 741856 741858, overlap 741851 741856 CTAATAATCAAACAC TAGACATCC TTTT GGATGTCTA TGCTTATAATCACGC TERM 938 741854 - 741875 + G 81 -11.7 -2.86271 | opp_overlap 741854 741851 741856, overlap 741850 741856 741858 CTAATAATCAAACAC TAGACATCC TTTT GGATGTCTA TGCTTATAATCACGC TERM 939 741873 - 741856 - g 71 -9.9 -2.91872 | opp_overlap 741854 741850 741856 741858, overlap 741854 741851 AATAATCAAACACTA GACATCC TTTT GGATGTC TATGCTTATAATCAC TERM 940 741856 - 741873 + G 72 -9.9 -2.98072 | opp_overlap 741856 741854 741851, overlap 741854 741850 741858 AATAATCAAACACTA GACATCC TTTT GGATGTC TATGCTTATAATCAC SPy_0895 741835 - 742623 + | histidine protein kinase cpsY 743607 - 742702 - | putative transcriptional regulator SPy_0899 743829 - 744365 + | hypothetical protein TERM 941 744571 - 744594 + F 100 -12.4 -4.81685 | overlap 744568 TTTTAGTTTGCTGTA GCCTCGCTTC TTTG GTAGCGAGGC TTTTTGGTGCTTAAT TERM 942 744665 - 744701 + G 93 -9.6 -4.7153 | opp_overlap 744694, overlap 744692 AGAACGCCCAATTAT TGCTTTAGACTTTTCA TCATT TGAGGAGACTAAAGCA TTTTTAGACTTATTT pyrF 744642 - 745334 + | orotidine 5'-phosphate decarboxylase pyrE 745392 - 746021 + | orotate phosphoribosyltransferase amiC 746218 - 747672 + | amidase TERM 943 747920 - 747898 - g 75 -2.7 -5.34309 | gap 1 ACTATCAAAGAAAAA GGGGT-GTTA AAAG TAGCTACCCC AGGAACCTATCAGCC TERM 944 748250 - 748237 - g 84 -2.3 -5.72207 | TGGAAAGGAAAAAAA GCAGC CGGC GCTTC TGGAACAGAATACAT SPy_0903 747754 - 748653 + | putative ABC transporter (binding protein) SPy_0904 748682 - 749332 + | putative ABC transporter (permease) TERM 945 749355 - 749383 + F 100 -9.7 -4.33928 | opp_overlap 749353 749357, overlap 749357 TAAAAAACGAATATT AACCCTGGAAATA TCA TATTTTCAGGGTC TTTCTATTTAAAATG TERM 946 749381 - 749357 - f 81 -10.1 -3.46844 | opp_overlap 749355 749357, overlap 749353 AAAAACGAATATTAA CCCTGGAAATA TCA TATTTTCAGGG TCTTTCTATTTAAAA TERM 947 749357 - 749381 + F 95 -12.3 -3.76586 | opp_overlap 749357 749353, overlap 749355 AAAAACGAATATTAA CCCTGGAAATA TCA TATTTTCAGGG TCTTTCTATTTAAAA ung 749465 - 750118 + | uracil-DNA glycosylase TERM 948 750828 - 750839 + G 72 -4.4 -4.82678 | TTTTAATGAAGGTAT TGCT GAGG AGCA TTTTCATTTTTGTGG pyrC 750250 - 751518 + | dihydroorotase TERM 949 751564 - 751540 - T 100 -11.5 -5.80951 | opp_overlap 751540 AGTTAAAACAAAAAA GCTTGACTTTC AGA GAAAGTCAGGC TTTTAGTAAATTTAT TERM 950 751540 - 751564 + T 100 -13.7 -4.33767 | opp_overlap 751540 AGTTAAAACAAAAAA GCTTGACTTTC AGA GAAAGTCAGGC TTTTAGTAAATTTAT SPy_0908 752217 - 751576 - | putative glycerol-3-phosphate acyltransferase PlsY TERM 951 752299 - 752280 - H 73 -3.6 -5.06103 | overlap 752283 AGAATTCGGAAAAAA TTAGCAAA TTAT TTTGCAAA ATTGGTAAAAAACTT TERM 952 752987 - 752969 - g 81 -7.5 -4.56597 | TTTTCTTTTGAAAAA TGTCAAG ATGAG CTTGACA GATCTTCGTGGAGAT TERM 953 753595 - 753579 - g 86 -2.3 -6.01725 | AAGAAAAACAAAAAA GACAA AGGCTTG TTGTC GGGAAAACTAACCCC parE 752349 - 754301 + | DNA topoisomerase IV subunit B TERM 954 755316 - 755306 - g 73 -6.8 -4.15748 | TGAGTTGAAAAAAGA GGCT GAT AGCC AAACCATTCTAAATT parC 754392 - 756851 + | DNA topoisomerase IV subunit A TERM 955 756848 - 756873 + F 100 -10.7 -4.49344 | opp_overlap 756847 756855, overlap 756855 GGTAGCTAGAACACG TTAAAAAGAGT GAAA ACTCTTTTTAA TTTTATGATAAATTT TERM 956 756866 - 756855 - f 70 -4.4 -4.67556 | opp_overlap 756848 756855, overlap 756847 AGAACACGTTAAAAA GAGT GAAA ACTC TTTTTAATTTTATGA TERM 957 756855 - 756866 + F 76 -4.4 -5.1417 | opp_overlap 756855 756847, overlap 756848 AGAACACGTTAAAAA GAGT GAAA ACTC TTTTTAATTTTATGA TERM 958 757121 - 757110 - g 71 -7.2 -3.91858 | opp_overlap 757110 TACATATCTCAGAAA GCGC TCCA GCGC TTCATTATGGACAAC bcaT 756974 - 757996 + | branched-chain amino acid aminotransferase TERM 959 758018 - 758003 - f 75 -9 -3.46858 | opp_overlap 758003, overlap 758001 757999 GTAGATTAAAATAGA GCTTGC TCTT GCAAGC TTTTTTGATTTTGTG TERM 960 758003 - 758018 + F 95 -9 -5.50313 | opp_overlap 758003 758001 757999 GTAGATTAAAATAGA GCTTGC TCTT GCAAGC TTTTTTGATTTTGTG SPy_0912 758060 - 758290 + | hypothetical protein TERM 961 758318 - 758343 + F 71 -7.8 -3.61517 | ACACTTGCCAGCTTA CAAAAACTAT GATAGA ATAGTTTTTG TTGTTACGGAAAGAT TERM 962 758658 - 758643 - f 85 -9 -4.26344 | opp_overlap 758643 ATATTGTTATCAAAA GCTAGC ATTG GCTAGC TTTTGTTGGAGGATT TERM 963 758643 - 758658 + F 89 -9 -4.64334 | opp_overlap 758643 ATATTGTTATCAAAA GCTAGC ATTG GCTAGC TTTTGTTGGAGGATT rpsA 758681 - 759886 + | 30S ribosomal protein S1 TERM 964 759923 - 759892 - T 85 -11.8 -3.12069 | opp_overlap 759893 759899, overlap 759899 TGAATTGTAATAAAT CTAAAAAGTTGAGG TTTT CCTCAACTTTTTAT TGTCTTCTGGTTAGA TERM 965 759893 - 759922 + T 100 -15.3 -3.79995 | opp_overlap 759892 759899, overlap 759899 GAATTGTAATAAATC TAAAAAGTTGAGG TTTT CCTCAACTTTTTA TTGTCTTCTGGTTAG TERM 966 759899 - 759916 + T 100 -9.9 -5.31072 | opp_overlap 759899 759892, overlap 759893 TAATAAATCTAAAAA GTTGAGG TTTT CCTCAAC TTTTTATTGTCTTCT TERM 967 759916 - 759899 - T 100 -9.9 -4.86939 | opp_overlap 759893 759899, overlap 759892 TAATAAATCTAAAAA GTTGAGG TTTT CCTCAAC TTTTTATTGTCTTCT TERM 968 760104 - 760089 - T 76 -2.6 -5.43487 | gap 1, opp_overlap 760089 760091 AAATCATATAAAAAA GCCTTAT TTG AT-AGGC TCTTTTTGTTTCTTG TERM 969 760296 - 760306 + T 71 -5.4 -4.58663 | opp_overlap 760296 TAATTAATGATGAGA TGGT GAA ACCA TTTTTAGCAAGTGCT SPy_0914 760735 - 760433 - | hypothetical protein SPy_0915 760934 - 761920 + | hypothetical protein TERM 970 761931 - 761950 + F 89 -7.2 -5.31275 | opp_overlap 761931 CCTAATATCTCAAAA CAAATCAG GAAA CTGGTTTG TTTTTTGTGATACAG TERM 971 761996 - 761980 - f 75 -8.1 -3.86916 | GATGATGAGACCAAA TTGCAAA GAC TTTGCAA CAAGATACAAGTGAA SPy_0916 761991 - 762182 + | hypothetical protein SPy_0917 762231 - 762650 + | hypothetical protein TERM 972 763320 - 763333 + G 76 -4.5 -5.06414 | opp_overlap 763314 CGGCATTAACAGCAC CTGCT AGTA GGCAG TTTTTATTAGGACAG SPy_0918 762887 - 763795 + | putative exfoliative toxin TERM 973 763889 - 763862 - T 71 -3.3 -5.20216 | opp_overlap 763862 GAGATTACTAAAAAA GAGGCCGGCAC TTTAAT GTGCTAGTCTC TTTTAAATTGATCCA TERM 974 763920 - 763939 + T 71 -3.4 -5.15117 | overlap 763934 TTGTCACGTTAGCGA GCTACACG ACGA CGCGCAGC TTTTTTGCGGTTTTC SPy_0919 764089 - 763913 - | hypothetical protein TERM 975 763946 - 763969 + g 76 -3.1 -5.29445 | overlap 763934 ACGCGCAGCTTTTTT GCGGTTTTC TTCAAT GAAAGCAGC TTTTTCTTCTTCAGG miaA 764223 - 765122 + | tRNA delta(2)-isopentenylpyrophosphate transferase SPy_0922 765195 - 766433 + | putative GTP-binding protein SPy_0923 766426 - 767061 + | hypothetical protein SPy_0924 767076 - 768005 + | ribonuclease Z SPy_0925 768005 - 768769 + | putative oxidoreductase TERM 976 768822 - 768804 - g 85 -8.9 -4.17186 | opp_overlap 768804 768807, overlap 768799 GAAAATAAAAGACAA GAAGCCA GATGA TGGCTTC TTTAAGCTAGCAAAG TERM 977 768804 - 768822 + G 74 -8.9 -3.59979 | opp_overlap 768804 768799, overlap 768807 GAAAATAAAAGACAA GAAGCCA GATGA TGGCTTC TTTAAGCTAGCAAAG TERM 978 768858 - 768844 - g 80 -6.4 -4.82128 | CTAGCAAAGACAAAA GGTCTA ACC CAGACC GCCGCTCAGTTGATT recJ 768766 - 770976 + | putative single-strand DNA-specific exonuclease apt 771127 - 771645 + | adenine phosphoribosyltransferase SPy_0928 771726 - 772409 + | hypothetical protein nth 772406 - 773062 + | putative endonuclease III (DNA repair) TERM 979 773046 - 773074 + F 93 -7.5 -5.61596 | opp_overlap 773052 ATCAAGATACTTATG GAAAATCGAAAGC CTA GCCTTTGGTTTTC TTTTTTTATGGAGGT SPy_0930 773134 - 773820 + | hypothetical protein TERM 980 774518 - 774508 - g 73 -6.8 -4.15066 | overlap 774515 774516 TACGGAGAAATTAAA GGAG AAA CTCC AAGGGTGGAAAGAAG SPy_0931 773810 - 774598 + | hypothetical protein TERM 981 775472 - 775460 - g 79 -3.4 -5.41143 | opp_overlap 775460 CAGGTTTTAAAAAAA CTTG AAATG CAAG CTCTTACTTATTTGC SPy_0932 774638 - 775744 + | putative oxidoreductase cpsFO 775802 - 776671 + | glucose-1-phosphate thymidyl transferase cpsFP 776671 - 777264 + | dTDP-4-dehydrorhamnose 3,5-epimerase cpsFQ 777508 - 778548 + | dTDP-glucose 4,6-dehydratase int3 779781 - 778642 - | putative integrase - phage associated TERM 982 778739 - 778751 + g 77 -6.3 -4.57341 | TCAGCATGTCCAACT CTATC CAT GATAG TTTTTAAGGGCACTT TERM 983 779861 - 779900 + r 93 -4.4 -5.98675 | gap 2, overlap 779861 779860 779897 TACTATACTAGATTT GCCTCGCGCTC--AGAGT CGCCAA ACTTTGAGAGCGTGGGGC TTTTTTATTTTTCTA TERM 984 779951 - 779926 - R 91 -4.7 -5.79595 | opp_overlap 779897 TTCTAAAACAAAAAA GAGCACTTATT CGAA AACAGGCGCTC ACAGTGGAGTTGGAC SPy_0938 780844 - 780035 - | hypothetical protein TERM 985 780144 - 780162 + g 74 -3.9 -5.01811 | CCGACAGGGTCAAGA TCGTTAA TTGGT TTAGCGA TTTTTAGTTTACTGA TERM 986 780519 - 780530 + g 80 -4.4 -5.27779 | opp_overlap 780519 TTGTTAATTGACAGA CTCT CTTT AGAG TTTTTTGATGTTAGC SPy_0939 781603 - 780857 - | putative repressor protein - phage associated SPy_0940 781793 - 781951 + | hypothetical protein TERM 987 781968 - 781955 - T 93 -8.1 -5.56263 | ATTACAAAATAAAAA CTCCC AAGA GGGAG TGGAAAGGAGGAAAA SPy_0942 782969 - 782130 - | hypothetical protein TERM 988 783078 - 783044 - gR 72 -5.8 -4.27483 | gap 1, overlap 783045 ATGGAGAAAATGAAA GCACCTAGCC-TAGA AGTTAA TCTACGGCTAGGCGA AAAGGAAATCAAGGC TERM 989 783077 - 783045 - gR 77 -9.3 -3.15405 | gap 1, overlap 783044 TGGAGAAAATGAAAG CACCTAGCC-TAGA AGTTAA TCTACGGCTAGGCG AAAAGGAAATCAAGG SPy_0944 783314 - 783087 - | hypothetical protein SPy_0943 783029 - 783169 + | hypothetical protein TERM 990 783287 - 783266 - Gf 73 -6.6 -4.19577 | opp_overlap 783266, overlap 783267 CAAGTTTTAAAACAA CTTGACGG AAATCG CCGTCAAA CTTTATGTTAATTTT SPy_0945 783388 - 783594 + | hypothetical protein SPy_0946 783634 - 784362 + | putative P1-type antirepressor - phage associated TERM 991 784554 - 784510 - gT 100 -10.1 -5.5604 | TCAACTAACAAAAAA GCTTCATCACCTAGAAGACTA CAA TAGTCCGATTGATGATGAAGC AATTAGATTGGCTGA SPy_0948 785401 - 784595 - | hypothetical protein SPy_0947 784394 - 784660 + | hypothetical protein TERM 992 785512 - 785487 - TR 75 -4.7 -4.9792 | overlap 785489 TAGCGGAGAGAAAAA GAGAGCCTATC ATAA GATAGACCCTG AACTGATAAAAACCG TERM 993 785510 - 785489 - TR 75 -7.3 -4.11141 | overlap 785487 GCGGAGAGAAAAAGA GAGCCTATC ATAA GATAGACCC TGAACTGATAAAAAC SPy_0949 785779 - 785543 - | hypothetical protein TERM 994 785870 - 785853 - H 100 -7.7 -5.9218 | CAGATAACAAAAAAA GTCCGAC GGCA ATCGGAC TCAAAACTAGATTAA SPy_0952 786231 - 786416 + | hypothetical protein SPy_0953 786899 - 787285 + | hypothetical protein SPy_0954 787266 - 787499 + | hypothetical protein SPy_0956 787645 - 787851 + | hypothetical protein SPy_0957 787907 - 788236 + | hypothetical protein SPy_0958 788239 - 789030 + | hypothetical protein TERM 995 789607 - 789576 - g 70 -9.6 -2.66257 | gap 1, opp_overlap 789582, overlap 789575 789574 789578 CGAAAAAGCAAAAGC TACCAT-CTCAGGAC AAT GTGCTGAGTATGGTA TGACTGACCAACCTT SPy_0959 789040 - 789705 + | hypothetical protein SPy_0960 789709 - 790068 + | hypothetical protein SPy_0961 790264 - 790602 + | hypothetical protein SPy_0962 790599 - 791111 + | hypothetical protein SPy_0963 791288 - 791533 + | hypothetical protein TERM 996 791540 - 791554 + F 84 -6.4 -5.04987 | AGGCAGTGATCAAGT CATTGC TGA GCAGTG TTTTTTAAAAGTATT SPy_0965 791585 - 792046 + | hypothetical protein TERM 997 792444 - 792426 - f 82 -4.5 -5.54907 | overlap 792420 TCCACAAAACAAAAA GACGTCC ATACG GAACGCC CCCTTGGTTAAATTT TERM 998 792580 - 792535 - g 78 -2.6 -5.43553 | gap 1, overlap 792540 792564 ATCCAAAAAACAAAA TCCAACGCCAAGCGTAAAT TGAGAGAGT ATCCACGCT-GGCGGAGGA TAGCTAATGATGTAG SPy_0967 792496 - 792936 + | hypothetical protein SPy_0968 793251 - 794165 + | hypothetical protein TERM 999 794215 - 794238 + G 76 -3.2 -5.23644 | overlap 794218 TTAAAAGAAACTGGC CGATTATACT ATTT GGTATAATAG TTTTTATATTTAGTT SPy_0970 794184 - 794645 + | hypothetical protein TERM 1000 794646 - 794664 + F 89 -7.4 -5.21236 | opp_overlap 794646 TTCAAAAATAAATAG GTCATCAC ATT GTGGTGGC TTTTTATTATGGATT SPy_0971 794673 - 795155 + | putative terminase, small subunit - phage associated TERM 1001 795372 - 795400 + G 74 -5.3 -4.82855 | TACCGATTTTAAATG GGCGTGTAATC AATTAAA GGTTACACACC TTTTTAAGTTTAATG TERM 1002 795637 - 795681 + G 83 -6.4 -5.14563 | opp_overlap 795637, overlap 795639 TTTAAACAGATAACA GTCACGTTTAACCCGTGGTC AGAAA GACATTGGCTTAAACGTGTC TTTTTTGATGAAGAA TERM 1003 795639 - 795679 + G 76 -7.6 -4.20707 | opp_overlap 795637, overlap 795637 TAAACAGATAACAGT CACGTTTAACCCGTGGTC AGAAA GACATTGGCTTAAACGTG TCTTTTTTGATGAAG SPy_0972 795133 - 796422 + | putative terminase, large subunit - phage associated SPy_0975 797917 - 799542 + | hypothetical protein SPy_0976 799533 - 799712 + | hypothetical protein TERM 1004 799717 - 799741 + F 100 -10.1 -4.84492 | opp_overlap 799717 TTGCATATTAATTAA GCGCTTAGCTA TTA TAGTTAAGTGC TTTTCTTATGCTTAA SPy_0977 799772 - 800041 + | hypothetical protein SPy_0978 800131 - 800301 + | hypothetical protein TERM 1005 800348 - 800306 - f 80 -7.1 -4.56978 | gap 1, overlap 800344 GTCTGAAATAACAAA TACCGTCTAGCTCTC-GGTC GGCA AACTTGCGAGCTAAACGGTA TCACCACAGAAGTGT TERM 1006 800358 - 800398 + F 78 -7.7 -4.11216 | opp_overlap 800360, overlap 800360 ACGGTATCACCACAG AAGTGTTTCTGCATGAAAT ATT ATATCATGTAGAGACGCTC TTTTCAAGATACACG TERM 1007 800360 - 800396 + F 86 -10.3 -3.65542 | opp_overlap 800360, overlap 800358 GGTATCACCACAGAA GTGTTTCTGCATGAAAT ATT ATATCATGTAGAGACGC TCTTTTCAAGATACA SPy_0979 800430 - 800678 + | hypothetical protein TERM 1008 800850 - 800824 - g 73 -6.6 -4.27007 | overlap 800849 GAAAGACTTAATAAA GATGGTGTAACT ACT AGTGACATCATC GACAGTCTTGGTCGA SPy_0980 800680 - 801426 + | putative antirepressor - phage associated TERM 1009 801438 - 801453 + F 82 -5.4 -5.24796 | opp_overlap 801438 TTAATTCACTTTAAA GTCGTA GCAA TACGGC TTTTTATTATGTCCA SPy_0981 801538 - 802071 + | hypothetical protein SPy_0982 802081 - 802461 + | putative structural protein - phage associated SPy_0984 802464 - 803513 + | hypothetical protein SPy_0985 803525 - 803791 + | hypothetical protein SPy_0986 803803 - 804156 + | hypothetical protein TERM 1010 804267 - 804247 - g 80 -11.3 -2.84298 | overlap 804244 CAGAGGTCATAAGTA TCACAAAAC CTT GTTTTGTGA TGGACATGGGCATGG SPy_0987 804153 - 804461 + | hypothetical protein SPy_0988 804442 - 804807 + | hypothetical protein TERM 1011 805017 - 805044 + G 74 -4.1 -5.01732 | opp_overlap 805019, overlap 805019 GTGCAGAAAAAACGG AAGCAGGTGTC TGACAT GGCATCTGCTA TTTTTTCGCAAGCTT TERM 1012 805019 - 805042 + G 71 -6.7 -4.13561 | opp_overlap 805019, overlap 805017 GCAGAAAAAACGGAA GCAGGTGTC TGACAT GGCATCTGC TATTTTTTCGCAAGC SPy_0989 804804 - 805193 + | hypothetical protein SPy_0991 805290 - 805856 + | putative structural protein - phage associated TERM 1013 805864 - 805882 + F 85 -6.7 -5.29885 | opp_overlap 805864 AAGGTTAATCAACAA GGCCAGT TAATT ACTGGTC TTTTATTTTTAAGTT SPy_0992 805916 - 806269 + | hypothetical protein SPy_0993 806311 - 806640 + | hypothetical protein TERM 1014 809235 - 809260 + G 77 -11.1 -2.75562 | opp_overlap 809233 809235, overlap 809234 809255 CTAATGACAATAACA CCAGCTCTAGC ACAA GCTGGCGCTGG CTTTGCCGCGTTTGT TERM 1015 809260 - 809235 - g 74 -8.9 -3.52995 | opp_overlap 809234 809235 809255, overlap 809233 CTAATGACAATAACA CCAGCTCTAGC ACAA GCTGGCGCTGG CTTTGCCGCGTTTGT TERM 1016 809255 - 809270 + G 73 -6.8 -4.258 | gap 1, opp_overlap 809233 809235, overlap 809235 809234 TCTAGCACAAGCTGG CGCTGGC TTT GCC-GCG TTTGTTGCTCAATCA SPy_0994 806655 - 810290 + | putative minor tail protein - phage associated TERM 1017 810270 - 810303 + F 100 -9.1 -5.40072 | gap 1, opp_overlap 810275, overlap 810275 ATTGAAAAAATCAGA CTAAAGAGAAGCAGCT GGT AGTTGTTTCTC-TTAG TTTTTTTGAAAGGAG TERM 1018 810275 - 810299 + F 87 -10.1 -4.03885 | opp_overlap 810275, overlap 810270 AAAAATCAGACTAAA GAGAAGCAGCT GGT AGTTGTTTCTC TTAGTTTTTTTGAAA TERM 1019 810711 - 810679 - g 72 -9.4 -3.06686 | gap 1, overlap 810676 ACCTGACAGAAATTA TCTAGG-CATCTTTA AATC TAAAGATGTCCCAGA AGAAGTTTCTAACGA SPy_0995 810323 - 811102 + | hypothetical protein SPy_0996 811099 - 813147 + | hypothetical protein TERM 1020 813348 - 813333 - g 74 -9 -3.5936 | overlap 813340 CCCAAAGGTCCTAAA GGAGAC ACTG GTCTCC AAGGTAAAACTGGAG hylP2 813147 - 814265 + | hyaluronidase - phage associated TERM 1021 814784 - 814772 - g 70 -3.4 -4.86033 | overlap 814761 814760 AAACGCTGATAAAAA GCTA TCAGC TAGC TATCAGCTGGGCATA SPy_0998 814278 - 816188 + | hypothetical protein SPy_0999 816202 - 816363 + | hypothetical protein SPy_1001 816366 - 816977 + | hypothetical protein TERM 1022 817106 - 817078 - g 85 -6.8 -5.01732 | gap 1 AATCCCTTTAAAAAA GCCATGG-AAGCT AATG AGTTTGCCATGGC TCAACTCAAGGACTC SPy_1002 816988 - 817284 + | hypothetical protein TERM 1023 817844 - 817857 + G 81 -6.7 -4.78107 | AGGTGTTACACCGTA TAGCC ATGT GGCTA TTTTTGATAGTGATG lys 817578 - 818912 + | putative lysin - phage associated TERM 1024 818945 - 818968 + F 83 -5.8 -5.18726 | opp_overlap 818942 818946 818947, overlap 818947 CTTTAGATAAGACAA ATGCCCTCGC TTTT GCGGGGGCTG TTTTTGTTATAAAGA TERM 1025 818967 - 818946 - f 78 -7.1 -4.31164 | opp_overlap 818945 818947, overlap 818942 818947 TTTAGATAAGACAAA TGCCCTCGC TTTT GCGGGGGCT GTTTTTGTTATAAAG TERM 1026 818947 - 818966 + F 100 -12.8 -4.22377 | opp_overlap 818942 818946 818947, overlap 818945 TTAGATAAGACAAAT GCCCTCGC TTTT GCGGGGGC TGTTTTTGTTATAAA TERM 1027 818966 - 818947 - f 83 -10.6 -3.17975 | opp_overlap 818947 818945, overlap 818942 818946 TTAGATAAGACAAAT GCCCTCGC TTTT GCGGGGGC TGTTTTTGTTATAAA speI 819186 - 819863 + | streptococcal exotoxin I speH 819889 - 820599 + | streptococcal exotoxin H precursor TERM 1028 821036 - 820985 - f 100 -14.3 -4.9448 | gap 2, opp_overlap 820992, overlap 820992 AGTGATTAAATAAAA CATTAAAGAACCTTGTCATATCAAC GATA ATTGATATGACAAGGTTCTTT--TG ATAGTTTAAATTGAT TERM 1029 820992 - 821031 + F 100 -19.7 -4.39386 | opp_overlap 820985 820992 AAATAAAACATTAAA GAACCTTGTCATATCAA CGATAA TTGATATGACAAGGTTC TTTTGATAGTTTAAA TERM 1030 821031 - 820992 - f 100 -20.4 -4.14724 | opp_overlap 820992, overlap 820985 AAATAAAACATTAAA GAACCTTGTCATATCAAC GATA ATTGATATGACAAGGTTC TTTTGATAGTTTAAA mutX 821203 - 821679 + | putative 7,8-dihydro-8-oxoguanine-triphosphatase SPy_1011 821737 - 822918 + | hypothetical protein SPy_1012 822908 - 824155 + | hypothetical protein TERM 1031 824198 - 824161 - T 100 -7.7 -5.89921 | opp_overlap 824161 ATCAGAATAAAAAAA CAGTTCTCCTAGGGGAA ATAA CTTTCCTAGGAGAGCTG TTTTTTAGTTGCTTA TERM 1032 824161 - 824198 + T 100 -13.6 -5.32565 | opp_overlap 824161 ATCAGAATAAAAAAA CAGTTCTCCTAGGGGA AATAAC TTTCCTAGGAGAGCTG TTTTTTAGTTGCTTA fbp 825866 - 824214 - | putative fibronectin-binding protein-like protein A TERM 1033 826126 - 826150 + H 93 -7.9 -5.45802 | opp_overlap 826124 826126 TTGGATTTCACAAGA GCGCCTAGTAA TCA TTACTAAGTGC TTTTTCTTTTGAGAA TERM 1034 827196 - 827183 - g 72 -3.1 -5.14965 | ATTGCTATTAAAAAA GAAGA TTTT CCTTC AGCTTCTTTTATTGA SPy_1016 826220 - 827218 + | hypothetical protein SPy_1017 827223 - 827387 + | hypothetical protein SPy_1018 827564 - 828433 + | putative ABC transport protein (permease) SPy_1019 828430 - 829188 + | ABC transporter ATP-binding protein TERM 1035 829202 - 829226 + F 85 -6.5 -5.38497 | opp_overlap 829189 829202 AATCAACGATCTAAA TCATTGACTAA TAA TAAGTCAGTGA TTTTTTGATTTCCAT SPy_1020 829392 - 831053 + | Zn-dependent hydrolase TERM 1036 831063 - 831090 + F 89 -9.3 -4.19735 | gap 1, opp_overlap 831062 831060 831063, overlap 831067 CGTTAGTGAAAATAG GAAGGTTAGGCA AAAAC TGCCTA-CCTTC TTTGATTTTAACAAC TERM 1037 831090 - 831063 - f 76 -10 -2.81208 | gap 1, opp_overlap 831063 831067, overlap 831062 831060 CGTTAGTGAAAATAG GAAGGTTAGGCAA AAA CTGCCTA-CCTTC TTTGATTTTAACAAC estA 831186 - 831971 + | putative tributyrin esterase SPy_1024 832001 - 832327 + | hypothetical protein TERM 1038 833993 - 833968 - g 70 -3.3 -4.84359 | gap 1 TTACCTTGAGAAAAA GGCAGAGCTA GAAGAAT TAGCCC-GCC TAGCAGCAGGAGAGA SPy_1025 832373 - 834280 + | ABC transporter ATP-binding protein TERM 1039 834310 - 834284 - f 88 -7.5 -5.02439 | gap 1, opp_overlap 834284 ATAGAATCATAAAAA TAAGCTTTAGCA GTTT TGCTAA-GCTTA TTTTTATCGCTTTGC TERM 1040 834284 - 834310 + F 88 -7.5 -4.94992 | gap 1, opp_overlap 834284 ATAGAATCATAAAAA TAAGCTTTAGCA GTTT TGCTAA-GCTTA TTTTTATCGCTTTGC TERM 1041 834622 - 834638 + G 73 -9.5 -3.1478 | opp_overlap 834620, overlap 834620 AAAATGGAACGTATT CGTGAAT TTG ATTCACG TATTAATAAACTCGT TERM 1042 835371 - 835360 - g 80 -4.4 -5.28942 | GAGTGGAAAGAAAAA GATC CAAT GATC AAATATCGTACTTAT acoA 834565 - 835533 + | putative acetoin dehydrogenase (TPP-dependent) alpha chain acoB 835592 - 836590 + | putative acetoin dehydrogenase (TPP-dependent) beta chain TERM 1043 836886 - 836847 - g 81 -5.8 -5.05782 | gap 1, opp_overlap 836860 ATCGAGTGGAAAAAA CAAGAAGGTGAT-ACCGTC AAT GAAGGTGATATCCTTCTTG AAATCATGTCAGACA acoC 836775 - 838184 + | branched-chain alpha-keto acid dehydrogenase subunit E2 TERM 1044 838340 - 838322 - f 83 -10.3 -3.25356 | overlap 838317 TGATAAGCAATTGAA TCCGAGC GAAAA GCTCGGA TAAAAATGGTAAGAG TERM 1045 839560 - 839544 - g 79 -5.1 -5.09426 | overlap 839545 TTGAACTTCAAAAAA TCCTTTC TAA GAAAGGC ATGAAGATCAAAACA TERM 1046 839559 - 839545 - g 73 -8.6 -3.64933 | overlap 839544 TGAACTTCAAAAAAT CCTTTC TAA GAAAGG CATGAAGATCAAAAC acoL 838511 - 840274 + | putative dihydrolipoamide dehydrogenase, component E3 TERM 1047 840394 - 840351 - T 77 -10.4 -2.58231 | opp_overlap 840353, overlap 840350 840362 840376 AGCACAACTATGAAC TGCACCCCAAACGTTAGA TATAAAAC CCTAACGTTTGGGGTGTT TTTGTATGACATTAA TERM 1048 840353 - 840392 + T 100 -16.7 -4.98522 | opp_overlap 840351 840350 840362 840376 CACAACTATGAACTG CACCCCAAACGTTAG ATATAAAACC CTAACGTTTGGGGTG TTTTTGTATGACATT TERM 1049 840460 - 840447 - T 74 -2.3 -5.42259 | opp_overlap 840447 TTAGCGCTAAAAAAA CCGAG AGAA CTCCG TTTGAAAGAAGCATC TERM 1050 840514 - 840499 - T 77 -3.3 -5.55695 | GAAGAAGACAAAAAA CCATT ATAAAG AATGG ATAAAGACGAGTTCT TERM 1051 840664 - 840620 - T 88 -7.3 -5.13722 | opp_overlap 840626, overlap 840621 840626 840648 CGTATCAAAATAAAA CGAAAAGGACTTAGTCCTCTA CAA TACAGAACTAAATCCTTTACT TCAAATAGAGTAGCC TERM 1052 840663 - 840621 - T 89 -10.8 -3.67149 | opp_overlap 840626, overlap 840620 840626 840648 GTATCAAAATAAAAC GAAAAGGACTTAGTCCTCTA CAA TACAGAACTAAATCCTTTAC TTCAAATAGAGTAGC TERM 1053 840658 - 840626 - T 100 -9.3 -4.83677 | opp_overlap 840626, overlap 840621 840620 840648 AAAATAAAACGAAAA GGACTTAGTCCTCTA CAA TACAGAACTAAATCC TTTACTTCAAATAGA hylA 843365 - 840948 - | extracellular hyaluronate lyase TERM 1054 843416 - 843403 - H 70 -3.9 -4.86822 | overlap 843412 AATGAGATAATAAAA GTAAA TTGA TTTAC TAAGTAAAAATATAC SPy_1033 843598 - 844587 + | putative lipoate-protein ligase TERM 1055 844667 - 844635 - T 74 -5.7 -4.76171 | gap 1, opp_overlap 844655, overlap 844630 GAAAAAACTATAAAA CTCCTAAGC-GAAC TATCGT GTCCTACTTAGGAG TTTTTGTTTGATGAC SPy_1034 845487 - 844696 - | hypothetical protein SPy_1035 846824 - 845487 - | UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase TERM 1056 845615 - 845630 + g 75 -5.4 -4.7219 | TTTCTATGATTTGCT CGAGCT TTTC AGCTTG TTTTATCTTAGTATC TERM 1057 847528 - 847552 + G 72 -8.7 -3.54935 | GCAGCCTGTGCTTAC TTGCCTTTG TCAGAAT CAAAGGCAA TTTCCAAAGAATTTG SPy_1036 846937 - 847788 + | hypothetical protein SPy_1037 847785 - 848741 + | hypothetical protein TERM 1058 849031 - 849043 + G 70 -7.7 -3.63298 | overlap 849029 ACTTGGCGTTTTAGC GACAC CTG GTGTC TCTTATTTAGTTAGA TERM 1059 849114 - 849068 - g 76 -4.5 -5.1523 | gap 1, overlap 849069 GTTAGAACAGAAAAA GCAAGTGCAGGTGTGATGATTT CTGC AAGTCATAAC-CCTGCGCTTGA CAATGGCATCAAATT TERM 1060 849113 - 849069 - g 70 -8 -3.68053 | gap 1, overlap 849068 TTAGAACAGAAAAAG CAAGTGCAGGTGTGATGATTT CTGC AAGTCATAAC-CCTGCGCTTG ACAATGGCATCAAAT SPy_1038 848795 - 850150 + | putative phospho-sugar mutase TERM 1061 850190 - 850169 - f 81 -8.1 -4.11183 | opp_overlap 850173, overlap 850173 GTTGAGTACAAACAA GAAACCTTA TTTC TAAGGCTTC TGTCAACAATTGGAA TERM 1062 850186 - 850173 - f 71 -5.3 -4.63952 | opp_overlap 850173, overlap 850169 AGTACAAACAAGAAA CCTTA TTTC TAAGG CTTCTGTCAACAATT TERM 1063 850201 - 850240 + F 78 -10.2 -2.69073 | opp_overlap 850207, overlap 850207 850237 GCTTCTGTCAACAAT TGGAAAGAGGCTTGGG GCGTTTAG CCCAAGTCTCTTTTTA TAAATTGTTATAAAT TERM 1064 850207 - 850234 + F 100 -9.2 -4.94222 | opp_overlap 850207, overlap 850201 GTCAACAATTGGAAA GAGGCTTGGG GCGTTTAG CCCAAGTCTC TTTTTATAAATTGTT TERM 1065 850234 - 850207 - f 70 -7 -3.72051 | opp_overlap 850201 850207 GTCAACAATTGGAAA GAGGCTTGGG GCGTTTAG CCCAAGTCTC TTTTTATAAATTGTT SPy_1039 850284 - 850925 + | hypothetical protein hemN 850988 - 852118 + | coproporphyrinogen III oxidase SPy_1042 852312 - 852881 + | hypothetical protein SPy_1043 852881 - 853645 + | hypothetical protein SPy_1044 853645 - 854277 + | hypothetical protein TERM 1066 854343 - 854313 - f 70 -8.4 -3.23708 | opp_overlap 854318, overlap 854318 TTTCCCTAAAAATGA TAAAACAAGCGTTT TGA AAGCGCTTGTTTTT TTGGTTTGCAGTCAG TERM 1067 854318 - 854338 + F 100 -10.5 -5.72207 | opp_overlap 854313 854318 CTAAAAATGATAAAA CAAGCGTTT TGA AAGCGCTTG TTTTTTTGGTTTGCA TERM 1068 854338 - 854318 - f 86 -8.3 -4.72556 | opp_overlap 854318, overlap 854313 CTAAAAATGATAAAA CAAGCGTTT TGA AAGCGCTTG TTTTTTTGGTTTGCA TERM 1069 854397 - 854383 - f 100 -11.4 -5.58074 | opp_overlap 854382 854381 GAAGTATCAAAAAAA GCACCG ACT CGGTGC CACTTTTTCAAGTTG TERM 1070 855055 - 855067 + G 74 -4.1 -5.14563 | opp_overlap 855033 ATAGTTTCTTTCATC GACTT GAA GAGTC TTTTTTGGTGGAAGA SPy_1046 854757 - 858863 + | hypothetical protein TERM 1071 858966 - 858980 + G 70 -3.6 -4.89477 | CGGAGCTGATCCATT TATCAG AAA TTGATA TTTTGTTATTAGAAA TERM 1072 859224 - 859239 + G 73 -7.6 -4.09685 | ATCAATCTTGCTATC TAGGAG CATG CTCCTA TTTTGAAAAATCCCA SPy_1047 858863 - 859732 + | hypothetical protein SPy_1048 859729 - 860070 + | hypothetical protein SPy_1049 860060 - 860722 + | hypothetical protein TERM 1073 861853 - 861836 - f 83 -7.7 -4.65747 | opp_overlap 861836 861838 TAATCCGTAAGAAAA GATAGGC AAAG GCCTACC TTTTTTGTTATAATA TERM 1074 861836 - 861853 + F 84 -5.5 -5.58179 | opp_overlap 861836, overlap 861838 TAATCCGTAAGAAAA GATAGGC AAAG GCCTACC TTTTTTGTTATAATA TERM 1075 862026 - 862011 - g 72 -9 -3.40175 | overlap 862007 862009 ATTTTGGAAAAGACA GAGACG GTTT CGTCTC GTGAAATGCAGGCTC TERM 1076 863678 - 863700 + G 83 -9.2 -3.9693 | overlap 863680 TGGTTCTGTCGAAGT CCCTCAAGAA GCC TTCTTGAGTG TTCTTTCAATGGATG TERM 1077 863680 - 863698 + G 79 -10.4 -3.57185 | overlap 863678 GTTCTGTCGAAGTCC CTCAAGAA GCC TTCTTGAG TGTTCTTTCAATGGA lepA 861900 - 863732 + | GTP-binding protein LepA SPy_1054 863979 - 864860 + | putative collagen-like protein TERM 1078 864900 - 864921 + F 100 -13.1 -5.08824 | opp_overlap 864900 864897 864896 GGAAAGTAAAACTCA GAGAGAACC TCAA GGTTCTCTC TTTTTTGAATCAAGA TERM 1079 864921 - 864900 - f 87 -13.1 -2.82666 | opp_overlap 864900, overlap 864897 864896 GGAAAGTAAAACTCA GAGAGAACC TCAA GGTTCTCTC TTTTTTGAATCAAGA csrA 865046 - 865483 + | methionine sulfoxide reductase B TERM 1080 866029 - 866057 + G 85 -5.4 -5.22289 | gap 1 CATTAAGGCAAAGGA TGAC-GAGGTTGC TAAG GCAATTTCAGTCA TTTTTCTCTTTAATA SPy_1056 865598 - 866617 + | hypothetical protein TERM 1081 866648 - 866628 - f 83 -11.3 -2.73067 | opp_overlap 866628, overlap 866632 GGTAATCAGACACGA GAAATCAGT TTG ACTGATTTC TTTTTTTGTATCTTA TERM 1082 866628 - 866648 + F 100 -11.3 -5.80248 | opp_overlap 866628 866632 GGTAATCAGACACGA GAAATCAGT TTG ACTGATTTC TTTTTTTGTATCTTA TERM 1083 866784 - 866798 + F 71 -3.5 -5.1356 | TGAGATAAGCAATTA CCGTT TACTC AGCGG TTTTTGTTAATAGAG SPy_1057 866824 - 867249 + | PTS system, mannose/fructose family IIA component TERM 1084 867420 - 867410 - g 71 -6.8 -4.13304 | AAATGACGCTTAAAA TGGC TGT GCCA AACGGCATGAAACTG SPy_1058 867268 - 867759 + | PTS system, mannose/fructose family IIB component SPy_1059 867794 - 868585 + | PTS system, mannose/fructose family IIC component SPy_1060 868582 - 869409 + | PTS system, mannose/fructose family IID component TERM 1085 869428 - 869461 + F 100 -14.1 -5.0925 | opp_overlap 869428 TCTCCTAGCAATAAA GGTAAGTAAGACAAG TTTT CTTGTTTTGCTTACC TTTTTCCTTTTAAGA TERM 1086 869461 - 869428 - f 93 -9.7 -4.24342 | opp_overlap 869428 TCTCCTAGCAATAAA GGTAAGTAAGACAAG TTTT CTTGTTTTGCTTACC TTTTTCCTTTTAAGA TERM 1087 869917 - 869929 + G 74 -4.9 -4.76041 | opp_overlap 869913 869917 TTTGCTAGTAACCCA CATTT AGG AAATG TTTTTAGTAAATCTG SPy_1061 869545 - 871194 + | putative two-component sensor histidine kinase TERM 1088 871771 - 871758 - g 84 -6.7 -4.98616 | opp_overlap 871757 871758 TCAAAATATCAAAAA GCATC TTCA GATGC CTTTAAGTGATTACA SPy_1062 871198 - 871986 + | putative two-component response regulator SPy_1063 872055 - 873026 + | putative periplasmic-iron-binding protein TERM 1089 873060 - 873071 + F 79 -3.6 -5.48787 | opp_overlap 873060 873061, overlap 873054 873052 TGTCAACTTGAAAAA GGTC CTAA GGCC TTTTTTCTATGTTAT SPy_1064 873123 - 873470 + | hypothetical protein SPy_1065 873805 - 874371 + | putative acetyltransferase SPy_1066 874375 - 875076 + | hypothetical protein gabD 875171 - 876568 + | putative succinic semialdehyde dehydrogenase TERM 1090 877140 - 877089 - g 81 -7 -4.77896 | gap 1, opp_overlap 877089 877088 877086, overlap 877090 TAATGAAGTTAAAAA GTTATTAGATAGGATTTTTCCATTT AAA AAGTGTAAAAATCCTATC-AATAAG GTCTGTTTTTATTAC TERM 1091 877139 - 877090 - g 79 -10.5 -3.45653 | gap 1, opp_overlap 877089 877088 877086, overlap 877089 AATGAAGTTAAAAAG TTATTAGATAGGATTTTTCCATTT AAA AAGTGTAAAAATCCTATC-AATAA GGTCTGTTTTTATTA uvrC 876670 - 878466 + | excinuclease ABC subunit C SPy_1069 878651 - 879253 + | NAD(P)H-dependent quinone reductase TERM 1092 879433 - 879423 - g 85 -5.4 -5.24449 | GACAAACGTAAAAAA GCTA TGC TAGC AGATTTAGTTGACCT SPy_1070 879378 - 880787 + | dipeptidase PepV TERM 1093 880830 - 880808 - T 100 -16.4 -4.82667 | opp_overlap 880808 TTATGACAGCAAAAA GAGCTGGAAC ACT GTTCCAGCTC TTTTGTGATGATTAG TERM 1094 880808 - 880830 + T 100 -16.4 -4.51097 | opp_overlap 880808 TTATGACAGCAAAAA GAGCTGGAAC ACT GTTCCAGCTC TTTTGTGATGATTAG trmE 882231 - 880855 - | tRNA modification GTPase TrmE TERM 1095 881605 - 881622 + g 73 -7.1 -4.12066 | opp_overlap 881603, overlap 881601 TGTTCGAAGGAGACT TTCCAAA AGGC TTTGGAA TTCTTGTGTTTTCTC TERM 1096 882426 - 882413 - H 70 -2.3 -5.24129 | GGTTTTGATAAAAAA CTGAC CTAA GACAG CAGGGGAGCATGCTC TERM 1097 882498 - 882519 + H 93 -3.7 -5.96219 | AACGTATTTGTACTT TCGTGTCTA GGTT TAGGTGCGA TTTTTTTTGTACCTA rplJ 882564 - 883064 + | 50S ribosomal protein L10 rplL 883129 - 883494 + | 50S ribosomal protein L7/L12 TERM 1098 883622 - 883597 - f 84 -8.3 -4.56597 | opp_overlap 883597 GTTTCTTGCCAAAAA TCCTGCCCAAA AAAT CTTTGGCAGGA TTTTTATTTTCTATA TERM 1099 883597 - 883622 + F 93 -7.6 -5.58522 | opp_overlap 883597 GTTTCTTGCCAAAAA TCCTGCCCAA AAAATC TTTGGCAGGA TTTTTATTTTCTATA TERM 1100 883703 - 883728 + F 93 -5.5 -6.09196 | opp_overlap 883706, overlap 883704 ATTTTTTTATGTGAA CGAGAACATTT TAAT AAGTGTTCTCA TTTTTTTATTTTCAG TERM 1101 883704 - 883727 + F 85 -9 -4.23077 | opp_overlap 883706, overlap 883703 TTTTTTTATGTGAAC GAGAACATTT TAAT AAGTGTTCTC ATTTTTTTATTTTCA SPy_1075 884024 - 884392 + | hypothetical protein TERM 1102 884513 - 884537 + F 76 -4.3 -5.18371 | opp_overlap 884513 ATTATAGTTGAGTAA GGACGTTAC ATAAGCA GTAAGGTCC TTTTATTTTGTCAGA SPy_1077 884567 - 884890 + | putative methyl transferase srtI 885728 - 886375 + | protein involved in lantibiotic (srt) production srtR 886526 - 887212 + | putative DNA binding regulatory protein - lantibiotic associated TERM 1103 887292 - 887304 + G 86 -7.7 -4.86385 | ACTGTTTTAATGATT GCGAT AAT ATCGC TTTCTTTTTCAAAGT TERM 1104 887733 - 887713 - g 73 -5.5 -4.64861 | overlap 887709 GGTTTGTAAAAGAAA TTTCTTTGA ATT TCAAGGAAA TCAAGAAGTTAGCAA srtK 887205 - 888551 + | putative histidine kinase - lantibiotic associated TERM 1105 888572 - 888611 + F 86 -5.2 -5.60993 | TTGATTGAAACTGGA GTATTTCAGGCAAAAAAT CGTA AATTTTTGGCTAAAATAC TTTTTTTCTGAACAA srtA 888699 - 888839 + | lantibiotic precursor TERM 1106 888902 - 888927 + F 75 -6.9 -4.258 | ATTTATAAATTTAGG GGAGTAGACTG ATTT TAGTTTGCTCC TTTATTAGTAGATAA srtT 888954 - 889571 + | ABC transporter (ATP binding) - lantibiotic associated TERM 1107 889692 - 889680 - g 90 -4.9 -5.61824 | opp_overlap 889683 CAAAATCTAAAAAAA TCTTA TGG TAAGA GAACCATATTGAATA srtF 889653 - 890342 + | ABC transporter (ATP-binding) - lantibiotic associated TERM 1108 890583 - 890567 - g 76 -6.7 -4.41348 | opp_overlap 890548 GGTTTGTTAAATAAA TTAGAAT TAG ATTCTAA TAAGTATTCTGTTTT srtE 890348 - 891097 + | hypothetical protein srtG 891100 - 891822 + | hypothetical protein SPy_1088 892014 - 892232 + | putative repressor protein - phage associated TERM 1109 892282 - 892235 - f 71 -3.4 -5.14682 | opp_overlap 892235 TCATAATAAATAAAA GTCTCGCCTTGATTTGTTCATT GACA ACTGAATAAACCGAGGTGGGAC TTTCTTGTTTGTCGA TERM 1110 892235 - 892282 + F 100 -10 -4.63048 | opp_overlap 892235 TCATAATAAATAAAA GTCTCGCCTTGATTTGTTCATT GACA ACTGAATAAACCGAGGTGGGAC TTTCTTGTTTGTCGA SPy_1093 894068 - 895303 + | putative D,D-carboxypeptidase, penicillin-binding protein TERM 1111 895341 - 895372 + T 100 -14 -4.99134 | opp_overlap 895341 AAACAATCAAAAAAA GACAGTTATGAAAG AATT TTTTCATAACTGTC TTTTTAGTTTACAGT TERM 1112 895372 - 895341 - T 100 -13.3 -5.73672 | opp_overlap 895341 AAACAATCAAAAAAA GACAGTTATGAAA GAATTT TTTCATAACTGTC TTTTTAGTTTACAGT SPy_1094 896382 - 895420 - | hypothetical protein TERM 1113 896198 - 896219 + g 71 -6 -4.21812 | GTTTCTTTTTTTGCC GTCTTTTT GTGATG AAAAAGAC TTATTTTAGGTACAA TERM 1114 896441 - 896455 + H 86 -2.8 -5.80727 | opp_overlap 896441, overlap 896433 TTTTAGAGAAAAGAA GGCT TGAAGTC AGCC TTTTTTCTTGTTTTT folC.1 896714 - 897991 + | putative folyl-polyglutamate synthetase folE 898002 - 898604 + | GTP cyclohydrolase I folP 898613 - 899413 + | dihydropteroate synthase folQ 899420 - 899779 + | dihydroneopterin aldolase folK 899776 - 900276 + | 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase TERM 1115 900266 - 900282 + F 75 -7.3 -4.12188 | opp_overlap 900266 900268 TTTCAGCTCAACAGA CAGAGTT CTA GACTCTG TTTTCGGAGTAATGC TERM 1116 900368 - 900382 + F 93 -7.1 -5.51402 | opp_overlap 900368 TTTGATATAATAGTA TCGGC TTTAT GCCGA TTTTTTTACGTGTAT murB 900426 - 901313 + | UDP-N-acetylenolpyruvoylglucosamine reductase potA 901359 - 902513 + | sperimidine/putrescine ABC transporter ATP-binding protein potB 902497 - 903291 + | putative spermidine / putrescine ABC transporter (permease protein) potC 903288 - 904064 + | putative spermidine/putrescine ABC transporter (permease protein) potD 904057 - 905130 + | putative spermidine/putrescine ABC transporter (periplasmic transport protein) TERM 1117 905135 - 905167 + T 73 -9.3 -2.87564 | opp_overlap 905134 905132 905142, overlap 905142 ATCGCAAATAAGCAC TCAAAAAGGCTGG TATTTCT CCAGCCTTTTTAA TGTATCGACAGATGA TERM 1118 905160 - 905142 - T 83 -7.4 -4.71382 | opp_overlap 905135 905142, overlap 905134 905132 ATAAGCACTCAAAAA GGCTGG TATTTCT CCAGCC TTTTTAATGTATCGA TERM 1119 905142 - 905160 + T 88 -7.4 -4.84527 | opp_overlap 905142 905134 905132, overlap 905135 ATAAGCACTCAAAAA GGCTGG TATTTCT CCAGCC TTTTTAATGTATCGA SPy_1106 905850 - 905185 - | putative two-component response regulator SPy_1107 907372 - 905831 - | putative two-component sensor histidine kinase TERM 1120 905885 - 905901 + g 71 -7.3 -3.95022 | opp_overlap 905885 TGTTGTCACTGAGAA CTGTAAC TCG GTTACGG TTTGATGTTGATGGA TERM 1121 906607 - 906631 + g 79 -10 -3.54459 | GGTAATTGAAACTGT TGCCAGTAGG TTTTC CCAACTGGCA TTTCCGAGCAATTAA TERM 1122 906820 - 906810 - G 89 -6.8 -5.26247 | CGAAAAGAAATAAAA CTGG TGA CCAG TAAACTAATAAGAAG TERM 1123 908594 - 908582 - g 70 -7.7 -3.6422 | opp_overlap 908570 908581, overlap 908580 TATCCCCTTAAAAGA GGTTG TGG CAACC CTTAGCTGGCAATAT malP 907533 - 908864 + | putative L-malate permease SPy_1110 908895 - 910061 + | NAD-dependent malic enzyme TERM 1124 910097 - 910143 + T 100 -19.3 -3.12378 | gap 1, opp_overlap 910097 910105, overlap 910105 AAGTTATACTTTAAA TCACAAAATAAGTAGAAGCATA TTTC TA-GCTTCTACTTATTTTGTGA TTAGCTAATATCATT TERM 1125 910143 - 910097 - T 100 -19.3 -3.64371 | gap 1, opp_overlap 910097 910105, overlap 910105 AAGTTATACTTTAAA TCACAAAATAAGTAGAAGCATA TTTC TA-GCTTCTACTTATTTTGTGA TTAGCTAATATCATT TERM 1126 910105 - 910135 + T 93 -9.3 -4.55491 | gap 1, opp_overlap 910105 910097, overlap 910097 CTTTAAATCACAAAA TAAGTAGAAGCATA TTTC TA-GCTTCTACTTA TTTTGTGATTAGCTA TERM 1127 910135 - 910105 - T 93 -9.3 -4.61566 | gap 1, opp_overlap 910097 910105, overlap 910097 CTTTAAATCACAAAA TAAGTAGAAGCATA TTTC TA-GCTTCTACTTA TTTTGTGATTAGCTA SPy_1111 911193 - 910144 - | putative zinc-containing alcohol dehydrogenase TERM 1128 911078 - 911090 + g 71 -4.8 -4.58395 | opp_overlap 911088 ATATGCAAATCAGTT CCAC AAATA GTGG TTTTTACCAACTGGA TERM 1129 911708 - 911725 + G 76 -7.1 -4.15106 | opp_overlap 911720 CCAGGCTCATTTGAT TTTTTGC ATAA GCAAAAA TTTTGGGACTTGGTC aphA 911429 - 912160 + | acid phosphatase/phosphotransferase TERM 1130 912208 - 912235 + F 83 -6.2 -5.15969 | opp_overlap 912226 AATTTCTTTCATCAC CCCACTGAGTAA CCAA TAGCCCAGTGGG TTTTTTGGGTTACAG TERM 1131 912608 - 912596 - g 82 -7.7 -4.53303 | overlap 912600 GATTCTGATATAAAA GGATC AGG GATCC CCCATGTCGAAGGAG TERM 1132 912938 - 912948 + G 74 -4 -5.05113 | overlap 912934 GCGCTAGTGGCTAGC TTAG TGG CTAA TTTTATTTCTCTGAA TERM 1133 913329 - 913340 + G 89 -4.4 -5.54264 | overlap 913337 GTTATGGAAGTGGCT TACC TGGA GGTA TTTTTTTACCTATTT SPy_1114 912338 - 913870 + | hypothetical protein SPy_1115 914033 - 914647 + | hypothetical protein SPy_1117 914806 - 915954 + | hypothetical protein TERM 1134 915964 - 915943 - f 95 -6.7 -5.81412 | gap 1, opp_overlap 915943 GCTATTCAAAAAAAA CAAGTTTCCT AAA AGGAA-CTTG TTTTTTTGTCGAATA TERM 1135 915943 - 915964 + F 89 -6.7 -5.626 | gap 1, opp_overlap 915943 GCTATTCAAAAAAAA CAAGTTTCCT AAA AGGAA-CTTG TTTTTTTGTCGAATA radC 916003 - 916683 + | DNA repair protein RadC SPy_1119 917380 - 916685 - | hypothetical protein SPy_1120 918034 - 917390 - | redox-sensing transcriptional repressor Rex TERM 1136 918156 - 918139 - R 88 -7.1 -5.1101 | GTATGAGTTAAAAAA GCTAAAA TTAG TTTTAGC ACTATATAATAGTAT SPy_1121 918633 - 918286 - | hypothetical protein SPy_1122 919750 - 918623 - | putative iron-sulfur cofactor synthesis protein TERM 1137 919289 - 919299 + g 71 -6.8 -4.0802 | opp_overlap 919289, overlap 919285 GTCCTTAATAGGTAA CAGG TCA CCTG TTTCGTTATTGGCAT prs 920727 - 919747 - | ribose-phosphate pyrophosphokinase TERM 1138 920824 - 920853 + r 81 -10.9 -2.75349 | opp_overlap 920826 920832, overlap 920821 920820 ACATCCCTATTTTAA CAGAAAAACAGAA AAAT TTCAGTTTTTCTG TCGCTTTTAGCCATT TERM 1139 920853 - 920832 - R 83 -6 -5.09762 | opp_overlap 920824 920821 920820, overlap 920826 ATTTTAACAGAAAAA CAGAAAAA TTTCAG TTTTTCTG TCGCTTTTAGCCATT SPy_1124 921445 - 920867 - | hypothetical protein TERM 1140 921199 - 921250 + g 73 -6.6 -4.21768 | opp_overlap 921189 TCATATCTTTTGCTT GTTCAAGAAAAAGAGGGACATTGT ACTC ACGATTCCCCACTTTTTCTGGCAC TTTTAGGGTTAATTC SPy_1125 921533 - 922204 + | putative GTP pyrophosphokinase ppnK 922179 - 923015 + | inorganic polyphosphate/ATP-NAD kinase SPy_1127 923012 - 923917 + | hypothetical protein TERM 1141 924606 - 924620 + G 73 -10 -2.76737 | overlap 924605 924608 CAACAGAAATTGCTA CAGGGT TGA ACCCTG ATTTGGCACTTGATG eutD 923921 - 924916 + | phosphotransacetylase TERM 1142 924998 - 925018 + T 89 -6.8 -5.76949 | opp_overlap 924998 TGACATTATTAAAAA CGAGTTGG CCAGA CCATCTCG TTTTTTTTGAAGGTG TERM 1143 925018 - 924998 - T 83 -7.5 -4.79223 | opp_overlap 924998 TGACATTATTAAAAA CGAGTTGGC CAG ACCATCTCG TTTTTTTTGAAGGTG SPy_1131 926698 - 926009 - | Na+ driven multidrug efflux pump TERM 1144 926044 - 926070 + g 78 -7.3 -4.33819 | gap 1, opp_overlap 926028 926023, overlap 926044 926045 926067 GGCCTGATGTGACAT C-GGACCAGCCA ACAA TGGCTTGTCCAG TTTCTTCTAAATACT TERM 1145 926045 - 926068 + g 76 -11 -2.51259 | opp_overlap 926028 926023, overlap 926044 926044 926067 GCCTGATGTGACATC GGACCAGCCA ACAA TGGCTTGTCC AGTTTCTTCTAAATA SPy_1133 927118 - 927846 + | putative ABC transporter ATP-binding protein SPy_1134 927833 - 929365 + | putative ABC transporter (binding protein) TERM 1146 929373 - 929393 + F 84 -6.1 -5.27399 | AGAAATAAACAGAAA TGTTGGTCC GTA GGACTGGCA TTTTTTCGTCTCTTA SPy_1135 929643 - 930626 + | guanosine 5'-monophosphate oxidoreductase xpt 930931 - 931512 + | xanthine phosphoribosyltransferase TERM 1147 932212 - 932241 + G 71 -6.5 -4.13872 | CTTTTGAAATCACTT CTATTGTGATGAT GTGT ATCATCGCAACGG TTTCTATGGTTGAAT SPy_1137 931512 - 932795 + | putative purine permease TERM 1148 932818 - 932804 - T 89 -7.1 -5.37865 | opp_overlap 932804 932797, overlap 932797 TGAATAATTAAAAAA CGGCT AATTG AGCCG TTTTTTCTGTGATCA TERM 1149 932804 - 932818 + T 93 -7.1 -5.39721 | opp_overlap 932797 932804, overlap 932797 TGAATAATTAAAAAA CGGCT AATTG AGCCG TTTTTTCTGTGATCA SPy_1138 933797 - 932859 - | putative thiamine biosynthesis lipoprotein precursor TERM 1150 933224 - 933252 + g 72 -9.7 -3.07816 | overlap 933210 GTTTTTGAATGCCAA TTCGAAAAGTCTT GTC AGGGCTTTTCGGA TTAGGTCCATGAACG TERM 1151 933844 - 933821 - R 87 -11 -3.40403 | opp_overlap 933819 933818, overlap 933823 CTCTTTTTAGCAGAA TACCCCCACT AAGG AGTGGGGGAA GGTCATTATGATTTT TERM 1152 933842 - 933823 - R 93 -13.6 -3.27475 | opp_overlap 933819 933818, overlap 933821 CTTTTTAGCAGAATA CCCCCACT AAGG AGTGGGGG AAGGTCATTATGATT SPy_1139 934035 - 933850 - | 4-oxalocrotonate tautomerase tdk2 934173 - 934742 + | thymidine kinase TERM 1153 935144 - 935158 + G 75 -5.6 -4.78107 | GTGGTGCTGCTGGTG GCGATG AAG CAGCGC TTTTTGCTGGTGATC prfA 934777 - 935856 + | peptide chain release factor 1 hemK 935856 - 936695 + | putative protoporphyrinogen oxidase SPy_1143 936679 - 937269 + | hypothetical protein SPy_1144 937287 - 937739 + | hypothetical protein TERM 1154 938609 - 938626 + G 79 -6.9 -4.57073 | opp_overlap 938609 938607 CTATTATTGATAATA CTGCGGC TATG GCAGCAG TTTTTGCACAAGATG glyA 937729 - 938985 + | serine hydroxymethyltransferase SPy_1146 938992 - 939969 + | hypothetical protein SPy_1147 939970 - 940569 + | hypothetical protein TERM 1155 940887 - 940901 + G 72 -8.6 -3.46965 | opp_overlap 940884 940881 TTTGAGCAAGGAGGA CCAAGA CCA TCTTGG TTATGCTAGTCTGTT SPy_1148 940579 - 942303 + | putative ABC transporter ATP-binding protein TERM 1156 942322 - 942343 + G 76 -7.3 -4.15044 | opp_overlap 942314 AAACAGATCATCACC TCCTAAAGC GAGT GCTTCAGGA TTTGTTAAAAAAACC TERM 1157 943493 - 943473 - g 85 -12.7 -3.14211 | opp_overlap 943473 943464 ATGCGCTTTTATGAA CTTGATGCT GGT AGCATCAAG TTAGATAAAGTTCCT TERM 1158 943473 - 943493 + G 84 -12.7 -3.08173 | opp_overlap 943473, overlap 943464 ATGCGCTTTTATGAA CTTGATGCT GGT AGCATCAAG TTAGATAAAGTTCCT TERM 1159 943794 - 943782 - g 74 -4.1 -5.00884 | opp_overlap 943782, overlap 943768 ATGTTTTTGAAAAAA CCAAA AGT CTTGG TTCTAGATGAAGCCA SPy_1149 942300 - 944027 + | putative ABC transporter ATP-binding protein nox 944268 - 945638 + | NADH oxidase TERM 1160 945655 - 945679 + T 93 -7.7 -5.54079 | opp_overlap 945655 ATCTGATAGGAAAAA GCCAGAGCAGT TCA GCAGCACTGGC TTTTTTGCTTTTTAA TERM 1161 945679 - 945655 - T 83 -7 -4.80882 | opp_overlap 945655 ATCTGATAGGAAAAA GCCAGAGCAG TTCAG CAGCACTGGC TTTTTTGCTTTTTAA TERM 1162 945795 - 945769 - T 78 -7.5 -4.23723 | gap 1, opp_overlap 945769 945770 945775, overlap 945775 GAATATCAGGCAAAA CA-AAAAGAGAC CGAA GTCTCTTTTGTG ATTAGTTTTTAGCAG TERM 1163 945775 - 945788 + T 76 -6.7 -4.59117 | opp_overlap 945769 945775, overlap 945770 945769 CAGGCAAAACAAAAA GAGAC CGAA GTCTC TTTTGTGATTAGTTT TERM 1164 945788 - 945775 - T 87 -6.7 -5.48213 | opp_overlap 945775 945770 945769, overlap 945769 CAGGCAAAACAAAAA GAGAC CGAA GTCTC TTTTGTGATTAGTTT ldh 946780 - 945797 - | L-lactate dehydrogenase TERM 1165 945866 - 945879 + g 79 -3.1 -5.37345 | AGCTTTCAATTGATT TGCAG AGGC TTGCA TTTTTTGTAATTCAG gyrA 946971 - 949457 + | DNA gyrase subunit A TERM 1166 950018 - 950000 - g 85 -2.5 -5.76237 | opp_overlap 950010, overlap 950004 950010 CAGATAAAGAAAAAA TTTACGA ATACA TCATAAA AGATGTTTTCACGGT SPy_1154 949477 - 950226 + | hypothetical protein SPy_1155 950309 - 950722 + | hypothetical protein TERM 1167 951001 - 951020 + F 76 -6.6 -4.48175 | CGTATTAATGTTTTT TTATCTAT TGCG ATAGATAA TTTTACTTCAATTTT TERM 1168 951310 - 951291 - g 79 -3.6 -5.41746 | AACTTGCTAAAAAAA TGTTTAAC GATA GTAAAACA CCGTCTAAAAGAAAG SPy_1156 951209 - 951328 + | hypothetical protein SPy_1157 951336 - 951704 + | hypothetical protein TERM 1169 951755 - 951730 - T 79 -9.1 -3.41292 | opp_overlap 951736, overlap 951736 ACCTTTAAGATAAGA CAAAAAGTGCC ATTA GGCACTTTTTT AATCTTCTGTTGGAA TERM 1170 951749 - 951736 - T 90 -8.1 -5.18995 | opp_overlap 951736, overlap 951730 AAGATAAGACAAAAA GTGCC ATTA GGCAC TTTTTTAATCTTCTG TERM 1171 951736 - 951749 + T 90 -8.1 -5.30189 | opp_overlap 951736 951730 AAGATAAGACAAAAA GTGCC ATTA GGCAC TTTTTTAATCTTCTG SPy_1158 952665 - 951754 - | hypothetical protein TERM 1172 952737 - 952721 - R 73 -8.1 -3.63991 | TACCACTTCTAAGAA TTGATGT CTT ACATCAA ATCATCACATTAAGC hlyIII 953432 - 952782 - | hypothetical protein TERM 1173 953360 - 953376 + g 77 -8.7 -3.85704 | overlap 953362 TAGCAAATGCTCCGA TAGCGTG TGT CACGCTG TTTGCTACTTCCTCA TERM 1174 953362 - 953374 + g 74 -9.1 -3.51124 | overlap 953360 GCAAATGCTCCGATA GCGTG TGT CACGC TGTTTGCTACTTCCT SPy_1160 953869 - 953429 - | hypothetical protein rbgA 954088 - 954936 + | ribosomal biogenesis GTPase rnhB 954926 - 955717 + | ribonuclease HII TERM 1175 955722 - 955738 + F 95 -5.9 -6.28401 | opp_overlap 955722 CTAATCCTTAAAAAG TTCTGTT TTT AGCAGAA TTTTTTTCTTTTTTA smf 955782 - 956618 + | Smf family DNA processing protein TERM 1176 957014 - 957001 - g 76 -2.3 -5.41746 | overlap 956988 AATTCTTTAAAAAAA GAAGC CAAA GCTGC TAAAAAAGTTTATTT TERM 1177 957525 - 957499 - g 76 -11 -2.64454 | overlap 957498 957496 CTAACAAATGAAGAT TTTCTTGTCAGC AAG GTTGACAAGAAA GAGCGACGTCGTAAT topA 956725 - 958854 + | DNA topoisomerase I TERM 1178 958860 - 958889 + F 95 -6.6 -5.95539 | opp_overlap 958860 AATTAAATAAAAAAA GAATTGGAAC TCCTTGTCTT GTTCCAATTC TTTTTTTATTTACAA TERM 1179 958889 - 958860 - f 100 -6.6 -6.01187 | opp_overlap 958860 AATTAAATAAAAAAA GAATTGGAAC TCCTTGTCTT GTTCCAATTC TTTTTTTATTTACAA SPy_1169 959824 - 960369 + | hypothetical protein ddh 960384 - 961376 + | D-lactate dehydrogenase TERM 1180 961390 - 961433 + F 100 -14.3 -5.49569 | AACAACTGATTTGAC GTCCATTATAAAGGAAT AATTCTAAAA ATTCCTTTATAATGGAC TTTTTTATATTAGTC satD 961481 - 962146 + | hypothetical protein satE 962139 - 962855 + | hypothetical protein TERM 1181 962874 - 962900 + F 100 -11 -5.50774 | opp_overlap 962878 AAAAGGGTTCCCGTA GAAAGAGACAAA CGC TTAGTCTCTTTC TTTTTCTTTCTTCTC TERM 1182 963629 - 963612 - g 79 -8.5 -4.13206 | ATGACCAAAGAAGAA TTCATGG CTTT CCATGAA GCTCTGACAACCGCA gid 963006 - 964352 + | tRNA (uracil-5-)-methyltransferase Gid TERM 1183 964366 - 964395 + F 76 -3.6 -5.30155 | opp_overlap 964355, overlap 964367 AACACTAAAAAAGAG TTCCTTTTCAGT TGAGTT GCTGAAGAGGAC TTTTTTACTTGCTGA TERM 1184 964367 - 964394 + F 70 -7.1 -3.77008 | opp_overlap 964355, overlap 964366 ACACTAAAAAAGAGT TCCTTTTCAGT TGAGTT GCTGAAGAGGA CTTTTTTACTTGCTG SPy_1174 964505 - 965911 + | oxaloacetate decarboxylase SPy_1175 965954 - 966268 + | hypothetical protein TERM 1185 966416 - 966386 - g 100 -14.1 -4.57482 | CTACTGAGAAAGAAA TGAATGCCAACGC TGCTG GCGGTGGCATTCA GGTAAAGGCTCCAAT SPy_1176 966268 - 966618 + | putative methylmalonyl-CoA decarboxylase, gamma-subunit SPy_1177 966628 - 967758 + | putative methylmalonyl-CoA decarboxylase, beta-subunit TERM 1186 967803 - 967825 + T 84 -6.3 -5.14563 | AATAAATCATTATCA GGAGTTGGA AGCAA TCTAGCTCC TTTTTTAGTAGAAAG citG 968842 - 967958 - | triphosphoribosyl-dephospho-CoA synthase SPy_1179 969530 - 968835 - | putative transcriptional regulator TERM 1187 969648 - 969615 - R 71 -5.4 -4.58663 | opp_overlap 969615 ATGAGTTCTGAAAAA TTAAAGCCATGCTC ACAAAA GGACATGACTTTAA TCATCTCATAAGGAA SPy_1180 971094 - 969688 - | putative Mg2+/citrate complex transporter TERM 1188 971301 - 971350 + H 90 -11.1 -3.87869 | AGTATCTTGATCTCA GTTTTTCAACAGTTACCTA AAAATAAAATAA AAGGTAACTGTTGAAAAAC TTTATGAAACATTGA SPy_1181 971471 - 971653 + | hypothetical protein SPy_1183 971849 - 972247 + | acetyl-CoA carboxylase biotin carboxyl carrier protein subunit SPy_1184 972292 - 973413 + | putative decarboxylase, beta subunit citD 973601 - 973909 + | citrate lyase subunit gamma TERM 1189 974630 - 974618 - g 78 -4.1 -5.33131 | CAACAAAAAAAGAAA TTGAC CAT GCCAA ACAAGTCATCTGGGC TERM 1190 974712 - 974699 - g 74 -5.3 -4.81249 | CCTTAAATGGAAAAA TGGTT GATA AACCA ATCGTTGAACGTGCA citE 973897 - 974784 + | putative citrate lyase, beta subunit citF 974787 - 976319 + | putative citrate lyase, alpha subunit citX 976312 - 976890 + | 2'-(5''-triphosphoribosyl)-3'-dephospho-CoA:apo-citrate lyase TERM 1191 976927 - 976915 - g 80 -7.7 -4.33105 | overlap 976917 CAATTATGACGAAAA TCCGT ATA ACGGA AACAGTTTTACGTGA oadA 976890 - 978299 + | oxaloacetate decarboxylase TERM 1192 978399 - 978373 - T 100 -10.3 -4.93316 | opp_overlap 978373 GAACAATACCAAAAA CCTACCTGATT TTGAT AATCAGATAGG TTTTTTATCTTAGTA TERM 1193 978373 - 978399 + T 93 -8.1 -5.49569 | opp_overlap 978373 GAACAATACCAAAAA CCTACCTGATT TTGAT AATCAGATAGG TTTTTTATCTTAGTA citC 979461 - 978409 - | putative citrate lyase synthetase (citrate (pro-3S)-lyase ligase) SPy_1193 980032 - 979550 - | hypothetical protein TERM 1194 980699 - 980738 + r 93 -13.3 -3.49668 | overlap 980700 TTGAAGCTATTTTTA TCTTTAATGTTACATAA AAACAA TTATGTAACATTAAAGG TTATCTAAAGCATTT TERM 1195 980700 - 980737 + r 95 -14.6 -2.69319 | overlap 980699 TGAAGCTATTTTTAT CTTTAATGTTACATAA AAACAA TTATGTAACATTAAAG GTTATCTAAAGCATT xerS 981802 - 980732 - | site-specific tyrosine recombinase XerS TERM 1196 981247 - 981207 - G 74 -9.2 -3.47383 | gap 1, overlap 981205 AGTAGAGCAATAATA GCCAAATC-CCTCTCCTTA TTTT TACGGAAAGAAGATTTGGC ACGATTAGACAATTT TERM 1197 981343 - 981357 + g 91 -7.8 -5.29208 | overlap 981348 GCTTAATATTTTCCG CTCTGG AAG CCAGGG TTTCTTTTTTCTTTT TERM 1198 981348 - 981361 + g 100 -3.1 -6.07374 | overlap 981343 ATATTTTCCGCTCTG GAAGC CAGG GTTTC TTTTTTCTTTTTTGT TERM 1199 981955 - 981966 + H 76 -4.4 -5.03715 | TCGGAAAGATGTTAC GAGA CAGA TCTC TTTTTTACAGATACT TERM 1200 982258 - 982235 - H 75 -9.8 -2.62263 | overlap 982250 ATTTTTTTGATACTA TTAGTAAAGT TATA ACTTTACTAA AGGAGCTACCAAATG SPy_1198 982271 - 982969 + | putative repressor protein TERM 1201 983059 - 983088 + T 100 -10.9 -4.9251 | opp_overlap 983064, overlap 983064 AATGAATTTCACATC AAAAAGAGACGAA AATT TTCGTCTCTTTTA TTTTCGTTTTTTCTT TERM 1202 983064 - 983083 + T 100 -10.8 -5.24291 | opp_overlap 983064, overlap 983059 ATTTCACATCAAAAA GAGACGAA AATT TTCGTCTC TTTTATTTTCGTTTT TERM 1203 983083 - 983064 - T 100 -10.8 -4.80882 | opp_overlap 983064 983059 ATTTCACATCAAAAA GAGACGAA AATT TTCGTCTC TTTTATTTTCGTTTT ffh 984645 - 983086 - | putative signal recognition particle ylxM 985001 - 984660 - | hypothetical protein TERM 1204 985086 - 985067 - R 75 -5 -5.00616 | opp_overlap 985068 985071, overlap 985068 TGTTCGTGTAAAAAA GGAAGTCA TAAA TGACTTCT TTACTAATTATTTTC TERM 1205 985068 - 985085 + r 82 -8.5 -3.91642 | opp_overlap 985068 985067, overlap 985071 GTTCGTGTAAAAAAG GAAGTCA TAAA TGACTTC TTTACTAATTATTTT TERM 1206 985085 - 985068 - R 77 -8.5 -3.60048 | opp_overlap 985068 985071, overlap 985067 GTTCGTGTAAAAAAG GAAGTCA TAAA TGACTTC TTTACTAATTATTTT SPy_1202 985815 - 985090 - | GntR family transcriptional regulator SPy_1203 987304 - 985871 - | hypothetical protein TERM 1207 986283 - 986294 + g 72 -4.4 -4.83169 | AATTCTGGCGCATAG CCAA TAAA TTGG TTTTTCTCAAACAAT TERM 1208 986690 - 986676 - G 70 -8.6 -3.28712 | opp_overlap 986665, overlap 986683 TGCTGCTTTGCATAA GCGAAA GCT TTTCGC AAAAGACGATTGTTT guaA 987471 - 989033 + | bifunctional GMP synthase/glutamine amidotransferase protein TERM 1209 989089 - 989034 - T 100 -23.2 -3.68222 | gap 1, opp_overlap 989036 989039 989043, overlap 989036 989039 989043 989051 GTTGAATGGGAATAA CAGAATAAACATTAAAAGACTCGC-CA AAA TGAGCGAGTCTTTTAATGTTTATTCTT TAACTGTTTTCGTAT TERM 1210 989036 - 989087 + T 100 -25.8 -3.85786 | gap 1, opp_overlap 989034 989036 989039 989043 989051, overlap 989039 989043 TGAATGGGAATAACA GAATAAACATTAAAAGACTCGC-CA AAA TGAGCGAGTCTTTTAATGTTTATTC TTTAACTGTTTTCGT TERM 1211 989087 - 989036 - T 100 -25.8 -3.42069 | gap 1, opp_overlap 989036 989039 989043, overlap 989034 989039 989043 989051 TGAATGGGAATAACA GAATAAACATTAAAAGACTCGC-CA AAA TGAGCGAGTCTTTTAATGTTTATTC TTTAACTGTTTTCGT TERM 1212 989039 - 989084 + T 100 -21.7 -4.03611 | gap 1, opp_overlap 989039 989036 989034 989043 989051, overlap 989036 989043 ATGGGAATAACAGAA TAAACATTAAAAGACTCGC-CA AAA TGAGCGAGTCTTTTAATGTTTA TTCTTTAACTGTTTT TERM 1213 989084 - 989039 - T 100 -21.7 -3.8372 | gap 1, opp_overlap 989036 989039 989043, overlap 989036 989034 989043 989051 ATGGGAATAACAGAA TAAACATTAAAAGACTCGC-CA AAA TGAGCGAGTCTTTTAATGTTTA TTCTTTAACTGTTTT TERM 1214 989080 - 989043 - T 100 -18.1 -4.51763 | gap 1, opp_overlap 989039 989036 989043, overlap 989039 989036 989034 989051 GAATAACAGAATAAA CATTAAAAGACTCGC-CA AAA TGAGCGAGTCTTTTAATG TTTATTCTTTAACTG TERM 1215 989043 - 989080 + T 100 -18.1 -4.58585 | gap 1, opp_overlap 989043 989039 989036 989034 989051, overlap 989039 989036 GAATAACAGAATAAA CATTAAAAGACTCGC-CA AAA TGAGCGAGTCTTTTAATG TTTATTCTTTAACTG TERM 1216 989072 - 989051 - T 93 -9.5 -4.55446 | gap 1, opp_overlap 989043 989039 989036, overlap 989043 989039 989036 989034 GAATAAACATTAAAA GACTCGC-CA AAA TGAGCGAGTC TTTTAATGTTTATTC SPy_1205 990298 - 989075 - | putative anti resistance factor TERM 1217 990544 - 990557 + r 82 -5.3 -5.30155 | opp_overlap 990544, overlap 990537 ATTAGATAAAAAAAA GATGT AGTC ACATC TTTTTTGGTTGGTGA TERM 1218 990557 - 990544 - R 93 -5.3 -6.0427 | opp_overlap 990537 990544 ATTAGATAAAAAAAA GATGT AGTC ACATC TTTTTTGGTTGGTGA SPy_1206 992228 - 990663 - | ABC transporter ATP-binding protein TERM 1219 992249 - 992236 - R 90 -8.1 -5.14965 | opp_overlap 992236 ACTGTCATCAAAAAA GCCGT CAAA ACGGC TTTATAGTTATTTCA TERM 1220 992236 - 992249 + r 81 -8.1 -4.17537 | opp_overlap 992236 ACTGTCATCAAAAAA GCCGT CAAA ACGGC TTTATAGTTATTTCA SPy_1208 992898 - 992341 - | hypothetical protein pdxK 993742 - 992876 - | pyridoxamine kinase TERM 1221 994198 - 994210 + G 73 -7.7 -3.93288 | opp_overlap 994197 CTAGAAGAACTAAGG GAAGC TTT GCTTC TTTACTTAGCTGAAA TERM 1222 994717 - 994733 + G 71 -3.7 -5.00616 | overlap 994720 GCTCTAGTTTTACCG TCAGGTT TAA AACCTCA TTTTTTAACCCAAAA SPy_1210 993832 - 995100 + | hypothetical protein TERM 1223 995449 - 995422 - T 100 -14.4 -5.56568 | opp_overlap 995422 ATAGTAGCAAAAAAA TACCTAACAGAT TTTT ATCTGTTAGGTA TTTAAACCTTATCCC TERM 1224 995422 - 995449 + T 100 -14.4 -3.62591 | opp_overlap 995422 ATAGTAGCAAAAAAA TACCTAACAGAT TTTT ATCTGTTAGGTA TTTAAACCTTATCCC SPy_1211 995854 - 995498 - | hypothetical protein TERM 1225 996022 - 996002 - R 100 -12.7 -5.81622 | ATAAAATTAAAAAAA GGATTGAGA ATA TCTCAATCC AAGGGGCATTCTTAA TERM 1226 996131 - 996116 - R 76 -7.6 -4.07568 | CTCCCCTGCGCAAAA GTGACT TTGC AGTCAC AATCGACTCATCGCA SPy_1212 997753 - 996176 - | putative cardiolipin synthetase TERM 1227 997811 - 997831 + r 100 -12.7 -4.72272 | opp_overlap 997805 997804 GGAAGAAAGGAGCGC TTGCTCGAA TTA TTCGAGCAA TTTTTCCTAAAAGAG fhs.1 999508 - 997838 - | formate--tetrahydrofolate ligase lplA 1000655 - 999636 - | putative lipoate-protein ligase TERM 1228 1000206 - 1000196 - G 73 -6.8 -4.29738 | CCACATCTAGCAAAA GGGA ATA TCCC CCATAAACACGGCCA SPy_1215 1001583 - 1000702 - | SIR2 family protein TERM 1229 1001205 - 1001187 - G 72 -4.6 -4.66833 | overlap 1001188 CTTGAATGTGAAAAA TGTTATGA GGA TCATAACC AGCCACCCAAAAAGC SPy_1216 1002388 - 1001576 - | hypothetical protein SPy_1217 1002713 - 1002381 - | putative glycine cleavage system H protein SPy_1218 1003753 - 1002755 - | hypothetical protein SPy_1219 1004949 - 1003750 - | putative trimethylamine dehydrogenase SPy_1220 1005797 - 1004946 - | hypothetical protein TERM 1230 1005935 - 1005917 - H 85 -8.8 -4.2586 | opp_overlap 1005914 1005917 1005917, overlap 1005922 CCATATTAATACAAA CGCAAGAC AAT GTCTGGCG TCATTATCTTCCGTT TERM 1231 1006362 - 1006380 + G 82 -3.8 -5.40072 | overlap 1006365 1006366 CCGAAAATCTCATCT GCATCTGA TTA TCAGGTTC TTTTTTTGAAAAAAA dpfB 1005984 - 1006670 + | phosphopantothenate--cysteine ligase dfp 1006663 - 1007208 + | phosphopantothenoylcysteine decarboxylase TERM 1232 1007681 - 1007691 + G 78 -4 -5.20328 | ATACTATATTTGTAT TATC TGG GATA TTTATTTTTTTCGCG SPy_1223 1007266 - 1007835 + | hypothetical protein TERM 1233 1007849 - 1007881 + F 89 -8.7 -4.42851 | opp_overlap 1007849 1007852, overlap 1007878 AATTAGCTTTCACAA TAACCGAGTTTTT CTCTTTT AAAAACTTGGTTA TTTTAACTTTCTTAC TERM 1234 1009217 - 1009190 - g 70 -2.7 -5.07486 | opp_overlap 1009214 GAGTTTGAAGAAAAA CATAACCACAC CTATAT GTTTGGTTTTG AAGAAAGCTTCGGAT pgmA 1008011 - 1009729 + | putative phosphoglucomutase TERM 1235 1009809 - 1009761 - T 82 -5.6 -5.3104 | gap 2, opp_overlap 1009773, overlap 1009773 TCAGTAAAAACAAAA GACAAG-C-AAAAAGAACTAAGCC GCT GACTTAGTTCTTTTTAGTCTATTC TTGCTTCTATTGTGA TERM 1236 1009773 - 1009795 + T 100 -9.2 -4.88711 | opp_overlap 1009761 1009773 AAAGACAAGCAAAAA GAACTAAGCC GCT GACTTAGTTC TTTTTAGTCTATTCT TERM 1237 1009795 - 1009773 - T 100 -11.4 -5.00412 | opp_overlap 1009773, overlap 1009761 AAAGACAAGCAAAAA GAACTAAGCC GCT GACTTAGTTC TTTTTAGTCTATTCT TERM 1238 1009906 - 1009865 - T 95 -8.8 -5.055 | opp_overlap 1009865 GTAAGTCCCAAAAAA GCACCCTTAAAGCTAGAC CTAACT ATCTTGCTTTAGGAGTGC TGTTAAACCTCACTA SPy_1225 1010898 - 1009942 - | putative sugar ABC transporter (permease protein) TERM 1239 1010480 - 1010454 - G 70 -3.1 -4.87803 | overlap 1010463 TATTTTTAAAGAAAA TATCACCAATC ACAGG AATTTGTGATA AACCTGGGAAATCAA SPy_1226 1011964 - 1010900 - | putative sugar ABC transporter (permease protein) TERM 1240 1011796 - 1011781 - G 71 -6.2 -4.2679 | CAAGCGCTATTAAAA TCAATG GCCC CATTGA ACGGAATATTTCTCC SPy_1227 1013489 - 1011957 - | putative sugar ABC transporter ATP-binding protein TERM 1241 1013561 - 1013581 + r 90 -11.3 -3.53012 | opp_overlap 1013557 1013556, overlap 1013515 CTATCACAAACTTTA CTGAGATAA AAA TTATCTCAG TTTAAAAAGAGCGAC TERM 1242 1013590 - 1013611 + r 75 -7.2 -4.09963 | opp_overlap 1013590 1013592 ATCTCAGTTTAAAAA GAGCGACC GACAAA GGTCGCGC TTCTTGTTCTTAAAC TERM 1243 1013611 - 1013590 - R 80 -7.2 -4.62336 | opp_overlap 1013590, overlap 1013592 ATCTCAGTTTAAAAA GAGCGACC GACAAA GGTCGCGC TTCTTGTTCTTAAAC TERM 1244 1013609 - 1013592 - R 79 -8.4 -3.92746 | opp_overlap 1013590, overlap 1013590 CTCAGTTTAAAAAGA GCGACC GACAAA GGTCGC GCTTCTTGTTCTTAA SPy_1228 1014680 - 1013628 - | putative lipoprotein TERM 1245 1013762 - 1013774 + g 82 -4.1 -5.39721 | CATAGACAGTTGTTT TTCCT CCA GGGAA TTTTTTATCTGCTAC cdd 1015163 - 1014774 - | cytidine deaminase TERM 1246 1015777 - 1015825 + r 100 -15.7 -4.14859 | opp_overlap 1015777 1015782 CTCTTTACTATTTAA GCAAACCTAATTTAAATGAGCAA TTG TTGATTATTTAAATTAGGCTTGC TTTATACTTCTTAAT TERM 1247 1015825 - 1015777 - R 100 -15.7 -3.09516 | opp_overlap 1015777, overlap 1015782 CTCTTTACTATTTAA GCAAACCTAATTTAAATGAGCAA TTG TTGATTATTTAAATTAGGCTTGC TTTATACTTCTTAAT TERM 1248 1015820 - 1015782 - R 93 -10.6 -3.94002 | opp_overlap 1015777, overlap 1015777 TACTATTTAAGCAAA CCTAATTTAAATGAGCAA TTG TTGATTATTTAAATTAGG CTTGCTTTATACTTC SPy_1232 1016409 - 1015816 - | 16S rRNA m(2)G 1207 methyltransferase TERM 1249 1015910 - 1015923 + g 84 -2.3 -5.81412 | overlap 1015907 ATTTTTGCTTTAGCG CTAGG AGCT CCTTG TTTTTTTTGAATCAC TERM 1250 1016467 - 1016477 + H 79 -5.4 -5.08011 | overlap 1016475 CTTTGAAATGGTTTA CAAG ACG CTTG TTTTTTAACAATTTT coaA 1016677 - 1017597 + | pantothenate kinase TERM 1251 1017883 - 1017858 - g 84 -6.8 -4.97405 | overlap 1017873 1017874 ATTCACAAAAACAAA GCAAGCCGCG ATAAAG CACGCCTTGC TGCAAAACTTGGCTA rpsT 1017666 - 1017899 + | 30S ribosomal protein S20 TERM 1252 1017928 - 1017917 - T 72 -5.8 -4.45151 | opp_overlap 1017917 AATATCCAATGAAAA CTCC AGCT GGAG TTTTTTTATACGGTA TERM 1253 1017917 - 1017928 + T 88 -5.8 -5.626 | opp_overlap 1017917 AATATCCAATGAAAA CTCC AGCT GGAG TTTTTTTATACGGTA TERM 1254 1018026 - 1017983 - T 72 -4.7 -4.70659 | gap 1, opp_overlap 1017975 1017994, overlap 1017986 1017988 1017994 GTTGACAGTTAAAAA TAACTTTAAAAGGGCTGACC TTATT GGTC-GCCCTTTTTAGCTTA TAGTTTGACTTCAAA TERM 1255 1018022 - 1017986 - T 71 -5.3 -4.46215 | gap 2, opp_overlap 1017994, overlap 1017983 1017988 1017994 GACAGTTAAAAATAA CTTTAAAAGGGCTGACC TTATT GGTC-GCCCTTTTT-AG CTTATAGTTTGACTT TERM 1256 1017994 - 1018015 + T 86 -8 -4.78752 | gap 1, opp_overlap 1017994 1017988 1017986 1017983 AAAATAACTTTAAAA GGGCTGACC TTATT GGTC-GCCC TTTTTAGCTTATAGT TERM 1257 1018015 - 1017994 - T 81 -8 -4.26634 | gap 1, opp_overlap 1017994, overlap 1017988 1017986 1017983 AAAATAACTTTAAAA GGGCTGACC TTATT GGTC-GCCC TTTTTAGCTTATAGT SPy_1236 1019334 - 1018024 - | putative histidine kinase protein SPy_1237 1020001 - 1019327 - | putative response regulator TERM 1258 1020333 - 1020312 - R 80 -5.1 -5.31275 | GCTCACTACAAAAAA GAGCTGGAA AGTC CCCCAACTC TTTTGCTTATGGTCT pepN 1022884 - 1020347 - | putative lysyl-aminopeptidase; aminopeptidase N TERM 1259 1021519 - 1021499 - G 89 -5.5 -5.4505 | opp_overlap 1021499 TTTTCCAATAAAAAA TTGTTTTTG ACT CAAAATCAA TTGATCGTTTTCAAG TERM 1260 1022945 - 1022926 - R 77 -9.4 -3.26546 | opp_overlap 1022926 1022928, overlap 1022924 1022916 CATAATAGATCAACA GATGATAC CTAA GTATCATC TCTGTCTACATATAT TERM 1261 1022926 - 1022945 + r 74 -9.4 -3.0218 | opp_overlap 1022924 1022916 1022926, overlap 1022928 CATAATAGATCAACA GATGATAC CTAA GTATCATC TCTGTCTACATATAT TERM 1262 1023053 - 1023043 - R 74 -6.8 -4.386 | opp_overlap 1023045 1023046 1023048, overlap 1023046 CAATTTCGTATAAAA CCAG GGA CTGG CAAGCTGTTTCCCAG phoU 1023742 - 1023089 - | putative phosphate uptake regulatory protein pstB 1024571 - 1023810 - | phosphate ABC transporter ATP-binding protein pstB2 1025384 - 1024581 - | putative phosphate ABC transporter ATP-binding protein pstC 1026287 - 1025400 - | putative phosphate ABC transporter (permease protein) pstC2 1027212 - 1026277 - | putative phosphate ABC transporter (permease protein) TERM 1263 1026892 - 1026882 - G 74 -4.6 -4.87665 | TTTCAGTCATAAAAA CGGC TGC GCCA ATGGCAAATGGGGTG pstS 1028089 - 1027223 - | putative phosphate ABC transporter, periplasmic phosphate-binding protein TERM 1264 1028173 - 1028185 + r 89 -6.3 -5.65927 | TAACATATCTACCTA TGCTT TGA AAGCA TTTTTTCTTTAAATA SPy_1246 1029538 - 1028228 - | putative nucleolar protein TERM 1265 1029276 - 1029255 - G 80 -10.1 -3.69618 | opp_overlap 1029254, overlap 1029253 GCCAAGTCTAAAACA CGACTCCCC TTTT GAGGAGCCG CTACTTGTGCCACCA SPy_1247 1030329 - 1029541 - | putative myo-inositol-1(or 4)-monophosphatase SPy_1248 1030597 - 1030319 - | hypothetical protein TERM 1266 1030561 - 1030530 - G 100 -12.4 -5.09225 | opp_overlap 1030528 ACTTTATTCAAAAAA TGAAGCACTGAGGA TATT TCTTCAGTGCTCCA ACTTAAGTCAAGTGG spxA 1031003 - 1030599 - | transcriptional regulator Spx mreA 1031978 - 1031046 - | bifunctional riboflavin kinase/FMN adenylyltransferase TERM 1267 1031118 - 1031132 + g 72 -4.3 -4.72846 | TCTATCAGTCAAATC TTCGA TTCCC TCGAA TTTTTCCATGTCTCG truB 1032891 - 1032007 - | tRNA pseudouridine synthase B TERM 1268 1032845 - 1032861 + g 80 -2.2 -5.54192 | opp_overlap 1032836, overlap 1032837 1032836 1032836 AAAACTGCGTCATGA GAGGTC ATGCC GGCTTC TTTTTTTAAATTAAT SPy_1252 1034347 - 1033007 - | hypothetical protein TERM 1269 1034413 - 1034391 - R 74 -3.4 -5.23316 | TATTATAGCAAAAAA GCTCAGGA AGTTAAG TCCCAAGC TGTCATAGATAAGAA SPy_1253 1035400 - 1034444 - | hypothetical protein TERM 1270 1035034 - 1035023 - G 73 -2.2 -5.24531 | AGTCCCTACAAAAAA GAGC ATAA ACTC ATTCGATAAAATAGG TERM 1271 1035366 - 1035349 - G 73 -5.5 -4.4959 | GGTAAGCAATTAAAA TGGCAAC AATG GTAGCCA AGGTCATTTTTAATG SPy_1254 1036007 - 1035411 - | hypothetical protein SPy_1255 1038735 - 1036099 - | hypothetical protein TERM 1272 1037331 - 1037341 + g 73 -5.4 -4.62471 | ACTGAGCTGCATTGA GGAA TAA TTCC TTTTTGACAATTAAG TERM 1273 1038711 - 1038722 + g 76 -4.4 -5.02323 | opp_overlap 1038711 TAGCTCTCAAAATAT CCTT CCAT AAGG TTTTCTTTATCATAC SPy_1257 1039451 - 1038750 - | ABC transporter ATP-binding protein SPy_1258 1039569 - 1040111 + | TetR/AcrR family transcriptional regulator TERM 1274 1040233 - 1040253 + T 81 -9.8 -3.52111 | opp_overlap 1040233 ACAGCAACAAAAAAA GTTTGAGG TGGGC CCTCAAAC TTATAATCCTTTTCG TERM 1275 1040253 - 1040233 - T 100 -9.8 -5.85737 | opp_overlap 1040233 ACAGCAACAAAAAAA GTTTGAGG TGGGC CCTCAAAC TTATAATCCTTTTCG SPy_1259 1040895 - 1040254 - | putative transcriptional regulator TERM 1276 1041015 - 1040996 - R 100 -12.2 -4.8543 | TAACCGTGACAAAAA GAGCTGGT AAAT ACCAGCTC AAACTTATCACCACC SPy_1260 1041549 - 1041058 - | hypothetical protein SPy_1261 1041757 - 1041557 - | hypothetical protein SPy_1262 1042337 - 1041798 - | hypothetical protein SPy_1263 1042538 - 1042350 - | hypothetical protein SPy_1264 1043160 - 1042549 - | hypothetical protein SPy_1265 1043445 - 1043197 - | hypothetical protein TERM 1277 1043766 - 1043800 + r 100 -13.1 -6.04419 | opp_overlap 1043766 GAAATCTAAAAAAAA TGAGCTTCCTACT CACTTATAT AGTAGGAAGCTCA TTTTTTTCTTATTTT TERM 1278 1043800 - 1043766 - R 100 -13.1 -5.89947 | opp_overlap 1043766 GAAATCTAAAAAAAA TGAGCTTCCTACT CACTTATAT AGTAGGAAGCTCA TTTTTTTCTTATTTT pcrA 1046127 - 1043809 - | DNA helicase II TERM 1279 1046937 - 1046948 + G 79 -3.6 -5.44119 | AGCGCTCTTTTGGAT GTGG GTTG CCGC TTTTTTTGGAATGGC SPy_1270 1046656 - 1047978 + | Na(+)-linked D-alanine glycine permease SPy_1272 1048098 - 1049333 + | putative cation efflux system protein TERM 1280 1049457 - 1049424 - T 90 -8.3 -5.18561 | opp_overlap 1049424 GAAATAGTTAAAAAA TCCCTACAATTTGTT TTTA AACAGATCATAGGGA TTTTTTTAAGAATAC TERM 1281 1049424 - 1049457 + T 86 -6.1 -5.42259 | opp_overlap 1049424 GAAATAGTTAAAAAA TCCCTACAATTTGTT TTTA AACAGATCATAGGGA TTTTTTTAAGAATAC cfa 1050475 - 1049702 - | cAMP factor TERM 1282 1050770 - 1050758 - R 76 -2.7 -5.46657 | opp_overlap 1050746 1050759, overlap 1050746 1050743 CAGTTTAATAAAAAA CCTTA AAC TAAGA TTTTTATTAAATCGT TERM 1283 1050830 - 1050841 + r 77 -5.8 -4.71482 | opp_overlap 1050830 TGTTAAACAAAAAAA GGAC AAGT GTCC TTTTTAAGATTTAAT TERM 1284 1050841 - 1050830 - R 93 -5.8 -5.95539 | opp_overlap 1050830 TGTTAAACAAAAAAA GGAC AAGT GTCC TTTTTAAGATTTAAT SPy_1274 1051681 - 1050845 - | putative amino acid ABC transporter, periplasmic amino acid-binding protein TERM 1285 1051249 - 1051275 + g 91 -6 -5.40072 | overlap 1051240 1051251 ACACTTTATGTTTCA TATCTGATATTG TTT TAATATCAGATC TTTTTTTGACAACAA TERM 1286 1051251 - 1051273 + g 85 -8.6 -4.34482 | overlap 1051249 ACTTTATGTTTCATA TCTGATATTG TTT TAATATCAGA TCTTTTTTTGACAAC SPy_1275 1052326 - 1051697 - | putative amino acid ABC transporter ATP-binding protein TERM 1287 1052186 - 1052153 - G 71 -6.7 -4.13767 | TTCGCCATTGTAAAA GACTTGACCTGAATC AATA GATTCAAGACCAGCC AACATCCGTAAGAGT TERM 1288 1052271 - 1052283 + g 72 -3.4 -5.00884 | opp_overlap 1052271 1052274 1052281 ACGGTTAGATTAAAG CCAT CAAAA ATGG TTTTTTGACCAAACT SPy_1276 1052977 - 1052336 - | putative amino acid ABC transporter (permease protein) TERM 1289 1053074 - 1053052 - R 70 -4.1 -4.82901 | opp_overlap 1053052 1053053 1053057, overlap 1053054 1053057 GGTTTTTTATAAAAA TACAACCAG ATCAG CTGGTTGCG TATTATTATTAGATT TERM 1290 1053072 - 1053054 - R 82 -8.9 -4.03995 | opp_overlap 1053053 1053052 1053057, overlap 1053052 1053057 TTTTTTATAAAAATA CAACCAG ATCAG CTGGTTG CGTATTATTATTAGA SPy_1277 1053418 - 1053083 - | hypothetical protein TERM 1291 1053595 - 1053573 - R 100 -12.8 -5.61881 | opp_overlap 1053573 1053572 TCCTAAAAACAAAAA GCAACCACCT AAC AGATGGTTGC CTTATCCATTATAAT TERM 1292 1053573 - 1053595 + r 78 -10.6 -2.66979 | opp_overlap 1053573, overlap 1053572 TCCTAAAAACAAAAA GCAACCACCT AAC AGATGGTTGC CTTATCCATTATAAT glmS 1055428 - 1053614 - | D-fructose-6-phosphate amidotransferase TERM 1293 1055612 - 1055587 - R 100 -9.1 -5.71983 | opp_overlap 1055587 CTAATTATAAAAAAA GTAGAGTAGCC TGAC AACTACTCTAC TTCTACAAATCCAAA sipC 1056161 - 1055604 - | putative signal peptidase I TERM 1294 1056354 - 1056332 - R 85 -6.4 -5.21709 | opp_overlap 1056332 TTTGATATCAAAAAA GGTTAGAA TATTGCC TTCTAACC TTTAGGTAAATAGTT pyk 1057881 - 1056379 - | pyruvate kinase TERM 1295 1057521 - 1057541 + g 75 -2.5 -5.26316 | overlap 1057522 1057523 GAGTTGATTGAATAC CTTGTGTAG TCG CTACACGGA TTTTTTCTCCAGTAA pfkA 1058957 - 1057944 - | 6-phosphofructokinase dnaE 1062147 - 1059037 - | DNA polymerase III DnaE TERM 1296 1062487 - 1062459 - g 73 -7.6 -3.9777 | gap 1 GTGAATATGCAGAAA TCGCA-GGTGTTA ATCC TAACACCATGCAA CGAGCGTTTACAGAA SPy_1285 1062332 - 1062703 + | GntR family transcriptional regulator TERM 1297 1063284 - 1063294 + G 73 -5.4 -4.63218 | CATTGAACCTATCCT TGAC GAA GTCA TTTTCTTGAAACAAG SPy_1286 1062703 - 1063401 + | ABC transporter ATP-binding protein SPy_1287 1063411 - 1064196 + | ABC transporter permease TERM 1298 1064206 - 1064245 + T 100 -13.3 -5.52909 | opp_overlap 1064206 CAGTAAGCGTTAAGA CTTTCTTTTAAACTATG ACACAC TATAGTTTAAAAGAAAG TTTTTTTCAGTGTTC TERM 1299 1064245 - 1064206 - T 87 -12.6 -3.06737 | opp_overlap 1064206 CAGTAAGCGTTAAGA CTTTCTTTTAAACTAT GACACACT ATAGTTTAAAAGAAAG TTTTTTTCAGTGTTC TERM 1300 1064300 - 1064277 - T 100 -6.8 -5.99154 | gap 1, opp_overlap 1064277 TAGTAAATAAAAAAA CCGTCTTCCAT CAA ATAGAAG-CGG TTTATCAAATTAACA SPy_1288 1064679 - 1064323 - | hypothetical protein TERM 1301 1064673 - 1064663 - GT 85 -6.8 -5.04733 | TAATTATAAATAAAA CCTG TTA CAGG GGCCAAAGATTAAAA SPy_1289 1064938 - 1064651 - | hypothetical protein TERM 1302 1065411 - 1065426 + H 93 -4.7 -5.98675 | opp_overlap 1065411 CATAACTTACTAAAA CCTTG TTACAT CAAGG TTTTTTCTTTTTGTC TERM 1303 1065572 - 1065630 + H 75 -7.2 -4.18303 | gap 3, opp_overlap 1065577 1065587, overlap 1065575 1065580 1065581 1065582 TCTAAAAAAAAGAAT CAAAATAGTA-CTA-AATTCCCCATAGCG CATG CGCTATGGGGAATCATAGCTA-TATCTTG TTTATAATTTATGAT TERM 1304 1065625 - 1065577 - H 100 -9.8 -4.72772 | gap 1, opp_overlap 1065575 1065572 1065580 1065581 1065582, overlap 1065587 AAAAAAGAATCAAAA TAGTACTA-AATTCCCCATAGCG CATG CGCTATGGGGAATCATAGCTATA TCTTGTTTATAATTT TERM 1305 1065580 - 1065623 + H 81 -9.9 -3.39301 | gap 2, opp_overlap 1065577 1065587, overlap 1065575 1065572 1065581 1065582 AAAGAATCAAAATAG TA-CTA-AATTCCCCATAGCG CATG CGCTATGGGGAATCATAGCTA TATCTTGTTTATAAT TERM 1306 1065581 - 1065621 + H 83 -10.6 -3.25162 | gap 1, opp_overlap 1065577 1065587, overlap 1065580 1065575 1065572 1065582 AAGAATCAAAATAGT ACTA-AATTCCCCATAGCG CATG CGCTATGGGGAATCATAGC TATATCTTGTTTATA TERM 1307 1065582 - 1065620 + H 93 -14.1 -2.54013 | gap 1, opp_overlap 1065577 1065587, overlap 1065581 1065580 1065575 1065572 AGAATCAAAATAGTA CTA-AATTCCCCATAGCG CATG CGCTATGGGGAATCATAG CTATATCTTGTTTAT TERM 1308 1065614 - 1065587 - H 100 -18.6 -3.88442 | opp_overlap 1065582 1065581 1065580 1065575 1065572, overlap 1065577 CAAAATAGTACTAAA TTCCCCATAGCG CATG CGCTATGGGGAA TCATAGCTATATCTT SPy_1290 1065679 - 1066299 + | hypothetical protein TERM 1309 1066356 - 1066327 - T 100 -10.9 -4.57837 | opp_overlap 1066327 ATATTTTGCTAAAAA GATTGATTTCGGT GTAC ATCGAAATCAATC TTTTTATATCATTTT TERM 1310 1066327 - 1066356 + T 100 -13.1 -5.07941 | opp_overlap 1066327 ATATTTTGCTAAAAA GATTGATTTCGGT GTAC ATCGAAATCAATC TTTTTATATCATTTT TERM 1311 1066503 - 1066473 - T 100 -12.8 -4.41895 | opp_overlap 1066473 1066476 AAGTCTGAAGTAAAA TCATAAGACAGCAG AAA CTACTGTCTTATAA TTTAGTTTAAGCATG TERM 1312 1066473 - 1066503 + T 79 -8.4 -4.06502 | opp_overlap 1066473, overlap 1066476 AAGTCTGAAGTAAAA TCATAAGACAGCAG AAA CTACTGTCTTATAA TTTAGTTTAAGCATG TERM 1313 1066476 - 1066500 + T 77 -10.1 -3.0693 | opp_overlap 1066473, overlap 1066473 TCTGAAGTAAAATCA TAAGACAGCAG AAA CTACTGTCTTA TAATTTAGTTTAAGC glgP 1068820 - 1066556 - | putative glycogen phosphorylase TERM 1314 1067881 - 1067903 + g 73 -5.6 -4.56775 | opp_overlap 1067880 1067878 1067881, overlap 1067883 CTTCTGCAAGAATAG TGTGGTTAGT GTA ACCAACCATA TTTTTCACAACAGCT malM 1070348 - 1068855 - | putative 4-alpha-glucanotransferase TERM 1315 1070451 - 1070429 - R 82 -4.2 -5.40474 | opp_overlap 1070421 AGTTTCCTAAAAAAA GTAACATTCC TTA AAAATGCTAC TTTTTTTGTTCTTAA malR 1071482 - 1070463 - | putative maltose operon transcriptional repressor TERM 1316 1070529 - 1070519 - G 78 -4 -5.28166 | TAAAAGGAACAAAAA TAGT CTG ACTA AGATTCTGTTCATTG TERM 1317 1071053 - 1071068 + g 79 -4.8 -5.0133 | opp_overlap 1071038 1071055 TGACAAATGGTAAGT TATTTG TCAT CAAATA TTTTTTGACAGGATC TERM 1318 1071658 - 1071624 - H 79 -10.5 -2.91888 | opp_overlap 1071641, overlap 1071639 1071640 1071642 AAATTCTCTAAACTA TTTTTTTAAAAAAAA CGACC TTTTTTTTAAAAAAA GGCTTGACTTTTTCT TERM 1319 1071664 - 1071639 - H 80 -2.7 -5.75342 | gap 1, opp_overlap 1071641, overlap 1071624 1071640 1071642 TTTTTTTAAAAAAAA CGA-CCTTTTTT TTA AAAAAAGGCTTG ACTTTTTCTGCAAGC TERM 1320 1071660 - 1071642 - H 77 -9 -3.60685 | opp_overlap 1071641, overlap 1071624 1071640 1071639 TTTTAAAAAAAACGA CCTTTTTT TTA AAAAAAGG CTTGACTTTTTCTGC TERM 1321 1072152 - 1072133 - g 79 -8.6 -4.0162 | opp_overlap 1072133 1072132 GGTGCACAGTACAAA GGGAAAAC ATAT GCTTTCCC ATTTGGTATTGAATC SPy_1294 1071728 - 1072975 + | putative maltose/maltodextrin-binding protein TERM 1322 1073127 - 1073182 + F 95 -13 -3.78775 | opp_overlap 1073147, overlap 1073126 TTTTTGTTTTACTAG TAGCTTAGTGCTACTTAAATTTTTAA CTCT TTAAAAGTTTACGTAACACTTAGCTA TTTCATCCTAACAAG TERM 1323 1074133 - 1074145 + G 79 -4.8 -5.01497 | opp_overlap 1074133 AATCGGCTTGATTAA TGGC TCACT GCCA TTTTTATCTGATCCT malF 1073249 - 1074610 + | putative maltose/maltodextrin ABC transport system (permease) TERM 1324 1074684 - 1074697 + G 71 -6.7 -3.99775 | overlap 1074675 AATCATTTGGCTCTT CCCAA TCGC TTGGG TTATTCTTACTAGCT malG 1074610 - 1075446 + | putative maltose/maltodextrin ABC transport system (permease) TERM 1325 1075463 - 1075489 + F 100 -9.5 -4.7497 | opp_overlap 1075463 TTACAACATACCAAA CCTTCTAAGGG CAAGC CCTTTAGGAGG TTTTTGATAAATAAG TERM 1326 1076070 - 1076104 + G 70 -2.8 -5.03314 | opp_overlap 1076070 1076072 1076090, overlap 1076072 TCTTTCAAATTAATA CAGATTATGCTGCTCT CAA AGATCAGGCTAATCAG TTTTTTAAGGATGAA SPy_1297 1075601 - 1076401 + | LacI family transcriptional regulator TERM 1327 1076447 - 1076474 + T 100 -11.4 -5.24989 | opp_overlap 1076447 CCTTGTAACTCAAAA CCTTGCCTCTTT AGAT AAAGAAGCAAGG TTTTTTGATGTCTAA TERM 1328 1076474 - 1076447 - T 100 -13.6 -4.27316 | opp_overlap 1076447 CCTTGTAACTCAAAA CCTTGCCTCTTT AGAT AAAGAAGCAAGG TTTTTTGATGTCTAA malA 1077332 - 1076517 - | putative maltodextrose utilization protein malD 1078214 - 1077354 - | putative maltodextrin transport system permease malC 1079518 - 1078211 - | maltodextrin transport system permease TERM 1329 1079398 - 1079365 - G 86 -11.9 -3.32769 | overlap 1079359 CTGTTAAAGCAGGAA TTCCTAGAACTACAA TTTC TAGTAGCTCTAGGAA GAAAACAACTAATAA TERM 1330 1079505 - 1079517 + g 83 -3.4 -5.54885 | GGCTTCTGTTGTCTT TGGT TCTCT ACCA TTTTTTATTCCTCTT amyA 1081728 - 1079593 - | putative cyclomaltodextrin glucanotransferase amyB 1083457 - 1081754 - | putative cyclomaltodextrinase malX 1084882 - 1083623 - | maltose/maltodextrin-binding protein TERM 1331 1083976 - 1083997 + g 79 -5.1 -5.1361 | overlap 1083993 AAATAACCCAAGCTT TACCACCTG CGAA CGGTTGGTA TTTTTTACCATTTGT TERM 1332 1085243 - 1085186 - R 100 -13.8 -4.88918 | opp_overlap 1085191, overlap 1085191 1085230 1085235 TCAGCGTAAATAAAA CAAAAGCTCTATAATCTCTTGAATGG GTAAAT CCACTGTAGAGATTATAGAGCTTTTT GAATATCAAAAAAGT TERM 1333 1085238 - 1085191 - R 100 -13.7 -5.34857 | opp_overlap 1085191, overlap 1085186 1085230 1085235 GTAAATAAAACAAAA GCTCTATAATCTCTTGAATGG GTAAAT CCACTGTAGAGATTATAGAGC TTTTTGAATATCAAA TERM 1334 1085191 - 1085238 + r 100 -12.2 -4.70659 | opp_overlap 1085191 1085186 1085230 1085235 GTAAATAAAACAAAA GCTCTATAATCTCTTGAATGGG TAAA TCCACTGTAGAGATTATAGAGC TTTTTGAATATCAAA SPy_1308 1086480 - 1085497 - | putative esterase dltD 1087761 - 1086511 - | putative extramembranal protein TERM 1335 1087709 - 1087695 - G 72 -3.6 -5.1166 | TAGGAAAACTAAAAA TAGTAA TCA CTACTA AAACAAAGGCAATAA dltC 1087993 - 1087754 - | D-alanine--poly(phosphoribitol) ligase subunit 2 dltB 1089267 - 1088011 - | putative integral membrane protein TERM 1336 1089143 - 1089154 + g 70 -3.6 -4.87803 | overlap 1089138 ACCAAGGTTTCATAA GTGC TTAA GCGC TTTTGTTTAAAAATC dltA 1090802 - 1089264 - | D-alanine--D-alanyl carrier protein ligase uvrB 1093212 - 1091221 - | excinuclease ABC subunit B TERM 1337 1091866 - 1091878 + g 75 -10.5 -2.92267 | overlap 1091864 1091860 GAACGTCCGTTCATC GCGCG CTA CGCGC TGGTTAATTTCTCCC TERM 1338 1092215 - 1092203 - G 87 -6.3 -5.33848 | overlap 1092205 ATCATAATTAAAAAA TCTTC TGG GAAGA AATCTAACAAGGTAT TERM 1339 1093309 - 1093295 - H 76 -4.3 -5.11937 | opp_overlap 1093295 1093297, overlap 1093297 AATAAGCGTAAAAAA CATGT CATTT ACATG TTATGTTTTATGACA TERM 1340 1093335 - 1093297 - H 71 -6.3 -4.17355 | opp_overlap 1093295 1093297, overlap 1093295 TAAGCGTAAAAAACA TGTCATTTACATGTTAT GTTTT ATGACATATAAATAACA AATTTCTTGCTTAAT TERM 1341 1093871 - 1093860 - g 88 -3 -6.02345 | opp_overlap 1093860 TAACTATAAAAAAAA GTAT GATT ATAC TGTTAAAACATTTGA SPy_1315 1093405 - 1095579 + | hypothetical protein TERM 1342 1095605 - 1095595 - g 71 -4 -4.96646 | TGACAGAATTAAAAA TTGA TGT TCAA GATTTACACAAATCT TERM 1343 1095983 - 1095960 - g 84 -6.7 -4.84359 | opp_overlap 1095966 GCACTTCTAGAAAAA GTCGGACTT TCTGAT AAGGCCGAC GCCTTCCCAGGAAGT TERM 1344 1095966 - 1095997 + G 73 -8 -3.85698 | opp_overlap 1095960 CTAGAAAAAGTCGGA CTTTCTGATAAGGC CGAC GCCTTCCCAGGAAG TTTATCCGGCGGGCA SPy_1316 1095579 - 1096319 + | putative ABC transporter ATP-binding protein TERM 1345 1096386 - 1096351 - T 100 -10.6 -5.055 | opp_overlap 1096357, overlap 1096354 1096357 CTAACTTCCAAAAAA TAATAAGGCAAGGAAA CAGG TTTCCTTGCCTTTTTT GGTTACTGTTATTAT TERM 1346 1096383 - 1096354 - T 100 -12.3 -4.62085 | opp_overlap 1096357, overlap 1096351 1096357 ACTTCCAAAAAATAA TAAGGCAAGGAAA CAGG TTTCCTTGCCTTT TTTGGTTACTGTTAT TERM 1347 1096357 - 1096380 + T 100 -14 -5.31059 | opp_overlap 1096354 1096351 1096357 TCCAAAAAATAATAA GGCAAGGAAA CAGG TTTCCTTGCC TTTTTTGGTTACTGT TERM 1348 1096380 - 1096357 - T 100 -14 -4.40692 | opp_overlap 1096357, overlap 1096354 1096351 TCCAAAAAATAATAA GGCAAGGAAA CAGG TTTCCTTGCC TTTTTTGGTTACTGT TERM 1349 1096413 - 1096462 + T 70 -2.4 -5.25803 | gap 1, opp_overlap 1096416 1096418, overlap 1096414 1096416 1096417 TTATTCAAACCAGCA AAATA-GGGATACTCTTATGA CTCTCTCCT TCATAAGAGTGTCCCCTATGC TTTTTTATGGGCGTT TERM 1350 1096459 - 1096416 - T 74 -6.3 -4.39386 | gap 1, opp_overlap 1096416 1096414 1096413 1096417, overlap 1096418 TTCAAACCAGCAAAA TA-GGGATACTCTTATGA CTCTCTCCT TCATAAGAGTGTCCCCTA TGCTTTTTTATGGGC TERM 1351 1096416 - 1096459 + T 75 -8.5 -3.44801 | gap 1, opp_overlap 1096416 1096418, overlap 1096414 1096413 1096417 TTCAAACCAGCAAAA TA-GGGATACTCTTATGA CTCTCTCCT TCATAAGAGTGTCCCCTA TGCTTTTTTATGGGC TERM 1352 1096417 - 1096457 + T 77 -9.2 -3.28457 | opp_overlap 1096416 1096418, overlap 1096416 1096414 1096413 TCAAACCAGCAAAAT AGGGATACTCTTATGA CTCTCTCCT TCATAAGAGTGTCCCC TATGCTTTTTTATGG TERM 1353 1096456 - 1096418 - T 87 -10.5 -3.79533 | opp_overlap 1096417 1096416 1096414 1096413, overlap 1096416 CAAACCAGCAAAATA GGGATACTCTTATGA CTCTCTCCT TCATAAGAGTGTCCC CTATGCTTTTTTATG TERM 1354 1096620 - 1096633 + T 74 -2.3 -5.47159 | ATTTTTTTCTGTCAT GCAAG GTCA CTCGC TTTTTCTTTATTGGC TERM 1355 1097077 - 1097091 + T 87 -11.4 -3.21593 | opp_overlap 1097076 1097073, overlap 1097074 1097088 GGTATGGTAAATTAG CAGCGC TAT GCGCTG TATTGTAAGCAGCTG SPy_1322 1098622 - 1098173 - | hypothetical protein SPy_1323 1098954 - 1098619 - | PTS system, cellobiose-specific IIA component SPy_1324 1099268 - 1098957 - | PTS system, cellobiose-specific IIB component SPy_1325 1101285 - 1099291 - | BglG family transcription antiterminator SPy_1326 1102485 - 1101391 - | outer surface protein bglA.2 1103894 - 1102494 - | putative beta-glucosidase SPy_1329 1104119 - 1104616 + | hypothetical protein TERM 1356 1104842 - 1104800 - T 91 -5 -5.84381 | opp_overlap 1104810, overlap 1104802 1104810 TTACCAAGAAAAAAA GGTCAAAAAAGGATGAGG GCCTAAG CCTCATCCTTTTTCAATT TTTCACGTTCTAAGC TERM 1357 1104840 - 1104802 - T 85 -12 -3.03774 | opp_overlap 1104810, overlap 1104800 1104810 ACCAAGAAAAAAAGG TCAAAAAAGGATGAGG GCCTAAG CCTCATCCTTTTTCAA TTTTTCACGTTCTAA TERM 1358 1104832 - 1104810 - T 100 -9.2 -5.16472 | opp_overlap 1104810, overlap 1104802 1104800 AAAAAGGTCAAAAAA GGATGAGG GCCTAAG CCTCATCC TTTTTCAATTTTTCA TERM 1359 1104810 - 1104832 + T 100 -9.2 -4.92239 | opp_overlap 1104810 1104802 1104800 AAAAAGGTCAAAAAA GGATGAGG GCCTAAG CCTCATCC TTTTTCAATTTTTCA SPy_1332 1104978 - 1104820 - | hypothetical protein obgE 1106354 - 1105047 - | GTPase ObgE TERM 1360 1105446 - 1105457 + g 86 -4.4 -5.4505 | ATCAAACTCGTCATA TTGG GCAG CCAA TTTTTTCTTGAAGGC TERM 1361 1105464 - 1105479 + g 77 -6.2 -4.65078 | GGCAGCCAATTTTTT CTTGAA GGCT TTCAAG TTTTCTTGAGCCTCT TERM 1362 1106411 - 1106400 - H 79 -3.6 -5.44119 | TTTACTTTAAAAAAA CGCC TTTC AGCG TTTCCTTACATTAAT TERM 1363 1106736 - 1106779 + H 93 -7.6 -5.63504 | gap 1, opp_overlap 1106748, overlap 1106737 CCTCGTCTGGTGAAC T-GCACCCCAAAAGTTAGA CACAAAA TCTAACGATTGGGGTGCTA TTTTTTTATGAAATT TERM 1364 1106737 - 1106777 + H 100 -12.7 -4.45201 | opp_overlap 1106748, overlap 1106736 CTCGTCTGGTGAACT GCACCCCAAAAGTTAGA CACAAAA TCTAACGATTGGGGTGC TATTTTTTTATGAAA TERM 1365 1106878 - 1106853 - g 70 -7.7 -3.75665 | overlap 1106854 GGAGAGTCCATTAAA TCCATATCAAA AAAG TTTGATATGGC AGAATCCGATCTCAA TERM 1366 1106877 - 1106854 - g 80 -11.2 -2.85078 | overlap 1106853 GAGAGTCCATTAAAT CCATATCAAA AAAG TTTGATATGG CAGAATCCGATCTCA SPy_1335 1106787 - 1107302 + | hypothetical protein TERM 1367 1108126 - 1108082 - g 100 -13.2 -4.62054 | opp_overlap 1108088, overlap 1108083 1108088 CGAATTAAAGCAAAA CTAAAAGGACTTAGTCCTGT CCAAT ACAGAACTAAATCCTTTCAA TAATTATTTGTCCAA TERM 1368 1108125 - 1108083 - g 100 -14.5 -3.36148 | opp_overlap 1108088, overlap 1108082 1108088 GAATTAAAGCAAAAC TAAAAGGACTTAGTCCTGT CCAAT ACAGAACTAAATCCTTTCA ATAATTATTTGTCCA TERM 1369 1108088 - 1108120 + G 70 -7.8 -3.74658 | opp_overlap 1108083 1108082 1108088 AAAGCAAAACTAAAA GGACTTAGTCCTGT CCAAT ACAGAACTAAATCC TTTCAATAATTATTT TERM 1370 1108120 - 1108088 - g 100 -12.2 -4.74084 | opp_overlap 1108088, overlap 1108083 1108082 AAAGCAAAACTAAAA GGACTTAGTCCTGT CCAAT ACAGAACTAAATCC TTTCAATAATTATTT SPy_1336 1107323 - 1108129 + | putative transposase - IS861 associated rsuA 1108912 - 1108178 - | putative 16S pseudouridylate synthase SPy_1339 1109024 - 1109389 + | hypothetical protein TERM 1371 1109450 - 1109397 - T 100 -12.1 -5.13722 | gap 1, opp_overlap 1109412 CGGAGTAAAACAAAA GAAAAGAACCAAAAAGGTAAGCAATC CCT AAGTGCTTACCTTTTTGGTTATCT-C AATCAATAAAATAGC TERM 1372 1109412 - 1109436 + T 88 -7.2 -4.96646 | opp_overlap 1109397 GAAAAGAACCAAAAA GGTAAGCAAT CCCTA AGTGCTTACC TTTTTGGTTATCTCA SPy_1340 1110729 - 1109509 - | hypothetical protein TERM 1373 1110240 - 1110228 - G 76 -3.3 -5.20783 | ATCCAAAGAGAAAAA GGCCA CGC CAGCC TAGACTTGGAGCCAG TERM 1374 1110820 - 1110805 - H 93 -7.6 -5.49809 | CAAAGGTCAAAAAAA GACTTG GAAA CAAGTC CGCAAGTCCATCAAA SPy_1343 1111031 - 1112587 + | hypothetical protein TERM 1375 1112620 - 1112589 - T 100 -13.2 -4.44046 | gap 1, opp_overlap 1112595 1112596 1112598 TTTACCGTAAATAAA CCATAA-CCACCCGT CTA ACGGGTGATTTATGG TATCTCTCAATAAAG TERM 1376 1112595 - 1112613 + T 82 -8.8 -4.05389 | opp_overlap 1112589, overlap 1112596 1112598 GTAAATAAACCATAA CCACCCGT CTA ACGGGTGA TTTATGGTATCTCTC TERM 1377 1112596 - 1112612 + T 87 -12.3 -3.0251 | opp_overlap 1112589, overlap 1112595 1112598 TAAATAAACCATAAC CACCCGT CTA ACGGGTG ATTTATGGTATCTCT TERM 1378 1112598 - 1112610 + T 74 -9.1 -3.05982 | opp_overlap 1112589, overlap 1112596 1112595 AATAAACCATAACCA CCCGT CTA ACGGG TGATTTATGGTATCT TERM 1379 1112667 - 1112643 - T 100 -11.5 -5.46129 | opp_overlap 1112643 CAATAAAGGAAAAAA GTCCCAATTCT CAG AGAGTTGGGAC TTTTTTAGCCTTCTA TERM 1380 1112643 - 1112667 + T 100 -13.7 -5.11033 | opp_overlap 1112643 CAATAAAGGAAAAAA GTCCCAATTCT CAG AGAGTTGGGAC TTTTTTAGCCTTCTA SPy_1344 1113095 - 1112694 - | hypothetical protein SPy_1345 1113692 - 1113180 - | hypothetical protein TERM 1381 1113784 - 1113806 + r 76 -4.1 -5.17576 | ACAGGGTAAACCTTT GTGGCTGAA ATGAA TTCTGCTAC TTTTTTACCTTGATG SPy_1346 1115385 - 1113997 - | putative RNA methyltransferase TERM 1382 1115420 - 1115397 - R 90 -8.2 -5.02074 | opp_overlap 1115385 1115397 1115400, overlap 1115385 CCATTGCTCAAAAAA GAAGAGCAAC TTTA GTTACTCTCC ATTATACCATATCTT psr 1116885 - 1115434 - | putative PBP 5 synthesis repressor TERM 1383 1115829 - 1115842 + g 71 -3.8 -4.8622 | CTTCGATGGTTTGGT TGGG AACAAC CCCA TTTTTCATTCGCAAG aroK 1117584 - 1117093 - | shikimate kinase TERM 1384 1117236 - 1117246 + g 81 -5.4 -5.02201 | opp_overlap 1117236 ACTTAAGAAATAGAG GTCT TTG AGAC TTTTTATCATGTTTT aroA 1118869 - 1117577 - | 3-phosphoshikimate 1-carboxyvinyltransferase TERM 1385 1118949 - 1118922 - R 85 -6.4 -5.252 | CATCCTCATAAAAAA TGAAGCAAGAAA ATAG TTTCTCACTCCA CGACTTATTATCTTT SPy_1353 1119936 - 1118971 - | hypothetical protein TERM 1386 1119784 - 1119771 - G 71 -3.9 -4.88407 | TGAGGTAAGGAAAAA TATTG GCTG CAATA ACAATTAATGGAAAG map 1120798 - 1119938 - | methionine aminopeptidase SPy_1355 1122097 - 1120814 - | hypothetical protein SPy_1356 1122648 - 1122106 - | putative acetyl transferase TERM 1387 1122178 - 1122201 + g 76 -4.6 -5.13521 | opp_overlap 1122179, overlap 1122179 1122187 ATCACTTCCTTTAAA ACAGGTTTTT AGTT GAAAACCTGC TTTTTTAGCTACTTT TERM 1388 1122200 - 1122179 - G 73 -7.4 -4.08216 | opp_overlap 1122178 1122179 1122187 TCACTTCCTTTAAAA CAGGTTTT TAGTTG AAAACCTG CTTTTTTAGCTACTT TERM 1389 1122179 - 1122200 + g 70 -8.1 -3.66486 | opp_overlap 1122179, overlap 1122178 1122187 TCACTTCCTTTAAAA CAGGTTTTT AGTT GAAAACCTG CTTTTTTAGCTACTT TERM 1390 1122627 - 1122617 - G 79 -3.2 -5.42259 | GGAGTCTCAAAAAAA GCAA ACA CTGC AAGCTTTGTCCAAAT TERM 1391 1122857 - 1122840 - R 83 -6.3 -5.00846 | opp_overlap 1122840 1122834, overlap 1122834 TAAATATCAGAAAAA GAGAATC TTTC GATTCCC TTGTTTCATTTGCTA grab 1123539 - 1122886 - | protein GRAB (protein G-related alpha 2M-binding protein) TERM 1392 1123895 - 1123878 - R 100 -9.9 -5.48063 | opp_overlap 1123878 ATGTAATATAAAAAA GAGAAGC GTTA GCTTCTC TTTAGTCTTCGATTA TERM 1393 1123878 - 1123895 + r 87 -9.9 -3.94853 | opp_overlap 1123878 ATGTAATATAAAAAA GAGAAGC GTTA GCTTCTC TTTAGTCTTCGATTA murZ 1125156 - 1123897 - | UDP-N-acetylglucosamine 1-carboxyvinyltransferase TERM 1394 1124134 - 1124164 + g 86 -9 -4.40237 | GATATCTGCTCCCAT GCGCATCAACTCTG GCA CATGGTTAATGCGC TTTTCATATATAGTG TERM 1395 1125281 - 1125309 + r 71 -3.2 -5.16237 | opp_overlap 1125261 1125281, overlap 1125284 TTTAATAACAAAAAA GCAGAGTAAG ATTTTTTCA CTTACTCTAC TTTTTTAATAAAGTT TERM 1396 1125309 - 1125281 - R 86 -5.4 -5.64873 | opp_overlap 1125281 1125284, overlap 1125261 TTTAATAACAAAAAA GCAGAGTAAG ATTTTTTCA CTTACTCTAC TTTTTTAATAAAGTT metK 1126526 - 1125330 - | S-adenosylmethionine synthetase TERM 1397 1126704 - 1126683 - R 73 -9.5 -2.79684 | gap 1, opp_overlap 1126682, overlap 1126676 CTAGTAAGGCAACTA GCTAGTCCAC CTA GTGG-CTAGC GTCCATTAACCAGAC TERM 1398 1126995 - 1126976 - R 93 -7.9 -5.44119 | opp_overlap 1126976 TTTATTTCAAAAAAA CCTCAAG GTTATT CTTGAGG TTCTCTTGATAGTCA TERM 1399 1126976 - 1126995 + r 79 -8.6 -3.72742 | opp_overlap 1126976 TTTATTTCAAAAAAA CCTCAAGG TTAT TCTTGAGG TTCTCTTGATAGTCA inlA 1129441 - 1127063 - | putative internalin A precursor TERM 1400 1127232 - 1127245 + g 76 -4.5 -5.09204 | CTTTCTTTCGCCTTA GTAGC CATA GCTGC TTTTTCTTCAGCTGT TERM 1401 1130254 - 1130265 + G 80 -4.4 -5.24129 | GATGTCATTATTGGG GTTG GTCT CAAC TTTTTTGTCACCGAC TERM 1402 1130446 - 1130422 - g 93 -8 -5.38054 | opp_overlap 1130421, overlap 1130407 GTTTACAAAGAAAAA TCACTTGTTC TTAAT AAACAAGTGA CCTTTATAGAAAATA birA 1129645 - 1130586 + | biotin--protein ligase SPy_1363 1130833 - 1130561 - | hypothetical protein TERM 1403 1130822 - 1130843 + g 80 -10.2 -3.77906 | opp_overlap 1130821 1130820, overlap 1130825 AACGAGATAAAACGT GGGTAAGG GCAAAA CCTTACCC TTATGTATTTCAGTT dnaX 1132529 - 1130859 - | DNA polymerase III subunits gamma and tau TERM 1404 1132425 - 1132409 - G 79 -5.1 -5.06451 | overlap 1132417 TAGGACCTGAAAAAA GATAAGC ATG GCTAATC TTGCCAGATTCAACT SPy_1365 1133026 - 1132529 - | hypothetical protein SPy_1366 1133171 - 1133980 + | hypothetical protein SPy_1367 1134296 - 1134033 - | hypothetical protein TERM 1405 1134364 - 1134342 - R 88 -7.1 -4.9645 | AGCACAACAATAAAA GAGCAGATT TAAAT AATCTACTC AGCCACTTCCACTAT udk 1135002 - 1134376 - | uridine kinase TERM 1406 1135705 - 1135716 + G 72 -4.4 -4.68994 | opp_overlap 1135705 AGAGCAAACCAACGA TGCT ATTC AGCA TTTTTACCTCATGGT deaD2 1135100 - 1136185 + | ATP-dependent RNA helicase TERM 1407 1136260 - 1136224 - T 100 -15.5 -4.73388 | opp_overlap 1136227 1136230, overlap 1136227 AAGGGCTACTAAAAA CAACAATCCAATTACTT CAA AAGTAATTGGATTGTTT AGTATATCAATTCTA TERM 1408 1136257 - 1136227 - T 100 -17.2 -4.47707 | opp_overlap 1136227 1136230, overlap 1136224 GGCTACTAAAAACAA CAATCCAATTACTT CAA AAGTAATTGGATTG TTTAGTATATCAATT TERM 1409 1136227 - 1136257 + T 100 -17.2 -3.89614 | opp_overlap 1136224 1136227, overlap 1136230 GGCTACTAAAAACAA CAATCCAATTACTT CAA AAGTAATTGGATTG TTTAGTATATCAATT TERM 1410 1136230 - 1136254 + T 100 -13.1 -4.06993 | opp_overlap 1136227 1136224, overlap 1136227 TACTAAAAACAACAA TCCAATTACTT CAA AAGTAATTGGA TTGTTTAGTATATCA SPy_1370 1137570 - 1136296 - | putative deacetylase TERM 1411 1137069 - 1137059 - G 73 -6.8 -4.26076 | opp_overlap 1137059 1137058 TTATCGCTATTAAAA CCAG CAT CTGG ATATTTTTTTTCAAC TERM 1412 1137620 - 1137655 + r 100 -12.2 -6.13503 | opp_overlap 1137620 AAAACATTAAAAAAA TAAACAAAAAGTTAAG TTAA CCTAACTTTTTGTTTA TTTTTTTTATTACTG TERM 1413 1137655 - 1137620 - R 100 -14.4 -5.69023 | opp_overlap 1137620 AAAACATTAAAAAAA TAAACAAAAAGTTAAG TTAA CCTAACTTTTTGTTTA TTTTTTTTATTACTG gapN 1139092 - 1137665 - | putative NADP-dependent glyceraldehyde-3-phosphate dehydrogenase TERM 1414 1138108 - 1138098 - G 73 -5.4 -4.64334 | opp_overlap 1138098 AACCCTTCAACAAAA TCAG CAG CTGA TGTATCAATTAATGG TERM 1415 1139267 - 1139248 - R 95 -8.6 -5.1675 | opp_overlap 1139248 TTATCTAGCAAAAAA GAGCTGGT TTAA ACCAACTC TTTAACCCTTTAATC pstI 1141010 - 1139277 - | putative phosphoenolpyruvate:sugar phosphotransferase system enzyme I TERM 1416 1139755 - 1139768 + g 72 -3.1 -5.1356 | ACCGCAACGCCTTCT GCAAG CAAG TTTGC TTTTTCTTCGTCAAA TERM 1417 1140239 - 1140254 + g 76 -3.2 -5.28942 | TGTGCGCATCTTTAA GGAGAG ACCA CTCTGC TTTTTGTTTGGCATA ptsH 1141278 - 1141015 - | phosphocarrier protein HPr TERM 1418 1141400 - 1141411 + H 71 -3 -5.10163 | AACGACAAAAAATGT GAAA TTAT TTTC TTTTATTTTCACGTT nrdH 1141671 - 1141889 + | putative glutaredoxin TERM 1419 1142008 - 1142018 + G 73 -5.4 -4.62069 | opp_overlap 1142001 1142008 1142005 CATAAAGACAAAGAA GCTT TAA AAGC TTTTTCCGCTGAAAA nrdE.2 1141909 - 1144068 + | ribonucleotide-diphosphate reductase subunit alpha TERM 1420 1144320 - 1144347 + F 82 -8.5 -4.07868 | TTAAACTTATTATTA CCGGTAGAACT TTGGTC GGTTCTACTGG TTTATCTCGATATCC TERM 1421 1144477 - 1144457 - gf 72 -8.4 -3.36505 | AGACGTCATTGACAA GTCAACTT GGGAA AAGTTGAC CGAACAATTTTGGCT TERM 1422 1144861 - 1144851 - gf 75 -5.4 -4.77173 | GCCTTACAAAAGAAA GTTG CCT CAAC ATATCTCGAAACTTT nrdF 1144401 - 1145360 + | ribonucleotide-diphosphate reductase subunit beta TERM 1423 1145371 - 1145393 + GT 100 -13.6 -4.77719 | opp_overlap 1145375 TCTAATAGTGCTCAC GAGACTGATA ATC TATCAGTCTC TTTTCTTAACTTTTG SPy_1379 1145335 - 1146648 + | putative chloride channel protein TERM 1424 1146975 - 1146930 - T 75 -4.8 -4.93316 | gap 1, opp_overlap 1146940, overlap 1146932 1146940 CAAGAATATGAAAAA TATGGAGAAAGTGCGTTCCCA GGACA TGGGAGCGCACTTCGTC-ATG CTCAATTTAAGACAA TERM 1425 1146973 - 1146932 - T 76 -7.4 -4.06487 | gap 1, opp_overlap 1146940, overlap 1146930 1146940 AGAATATGAAAAATA TGGAGAAAGTGCGTTCCCA GGACA TGGGAGCGCACTTCGTC-A TGCTCAATTTAAGAC TERM 1426 1146940 - 1146966 + T 95 -14.5 -3.23395 | opp_overlap 1146940 1146932 1146930 AAAAATATGGAGAAA GTGCGTTCCCA GGACA TGGGAGCGCAC TTCGTCATGCTCAAT TERM 1427 1146966 - 1146940 - T 100 -12.3 -4.02468 | opp_overlap 1146940, overlap 1146932 1146930 AAAAATATGGAGAAA GTGCGTTCCCA GGACA TGGGAGCGCAC TTCGTCATGCTCAAT SPy_1384 1148729 - 1148034 - | hypothetical protein SPy_1385 1149509 - 1148748 - | hypothetical protein TERM 1428 1149017 - 1149004 - G 73 -6.7 -4.2018 | overlap 1149008 1149010 AAATTTGGAAAATAA GGAAC ATCG GTTCC CCGAATGGCATTGTA SPy_1386 1149721 - 1149506 - | putative transcriptional regulator protein TERM 1429 1150078 - 1150041 - R 86 -10.2 -3.61178 | opp_overlap 1150040 1150050, overlap 1150050 GGTAGTCATTTCAAA TATAAAAAACCAAGTT CTAAAT AACTTGGTTTTTTATG GATTTACACTATTTC TERM 1430 1150069 - 1150050 - R 87 -6.5 -5.56264 | opp_overlap 1150050 1150040, overlap 1150041 TTCAAATATAAAAAA CCAAGTT CTAAAT AACTTGG TTTTTTATGGATTTA TERM 1431 1150050 - 1150069 + r 85 -6.5 -5.33866 | opp_overlap 1150041 1150050, overlap 1150040 TTCAAATATAAAAAA CCAAGTT CTAAAT AACTTGG TTTTTTATGGATTTA alaS 1152700 - 1150082 - | alanyl-tRNA synthetase TERM 1432 1150431 - 1150411 - G 70 -9.7 -2.54801 | opp_overlap 1150411 1150414 1150422, overlap 1150410 1150408 1150413 CATCTTTAAAGACAT CACCAGCTG CTG CAGCTGCTG CTTTTTCTTTAAGTT TERM 1433 1150411 - 1150431 + g 79 -9.7 -3.78189 | opp_overlap 1150410 1150408 1150411 1150413, overlap 1150414 1150422 CATCTTTAAAGACAT CACCAGCTG CTG CAGCTGCTG CTTTTTCTTTAAGTT TERM 1434 1150414 - 1150428 + g 72 -10 -2.65994 | opp_overlap 1150413 1150411 1150410 1150408, overlap 1150411 1150422 CTTTAAAGACATCAC CAGCTG CTG CAGCTG CTGCTTTTTCTTTAA TERM 1435 1150422 - 1150432 + g 89 -6.8 -5.33026 | opp_overlap 1150413 1150411 1150410 1150408, overlap 1150414 1150411 ACATCACCAGCTGCT GCAG CTG CTGC TTTTTCTTTAAGTTC prsA 1154142 - 1153087 - | foldase protein PrsA SPy_1391 1154912 - 1154205 - | O-methyltransferase TERM 1436 1154951 - 1154934 - R 93 -7 -5.75478 | opp_overlap 1154929 1154934 AATTATATAAAAAAA CCCTAG GCTTTG CTAGGG TTTACTTTTAAATTT TERM 1437 1154934 - 1154951 + r 75 -7 -4.24432 | opp_overlap 1154934, overlap 1154929 AATTATATAAAAAAA CCCTAG GCTTTG CTAGGG TTTACTTTTAAATTT SPy_1392 1156174 - 1154978 - | putative oxalate:formate antiporter TERM 1438 1156518 - 1156464 - R 100 -21.9 -5.40873 | opp_overlap 1156477, overlap 1156465 AATATAAAAAGAAAA TGACCGATAGAAATGGAGATTCACA CCAAC TGTGAATCTCCATTTCTATCAATCC TAAACTCTTTTTGTC TERM 1439 1156517 - 1156465 - R 100 -25.4 -3.80863 | opp_overlap 1156477, overlap 1156464 ATATAAAAAGAAAAT GACCGATAGAAATGGAGATTCACA CCAAC TGTGAATCTCCATTTCTATCAATC CTAAACTCTTTTTGT TERM 1440 1156477 - 1156505 + r 100 -14.8 -4.07124 | opp_overlap 1156465 1156464 AATGACCGATAGAAA TGGAGATTCACA CCAAC TGTGAATCTCCA TTTCTATCAATCCTA pepB 1158355 - 1156550 - | putative oligopeptidase SPy_1395 1159330 - 1158368 - | putative transcription factor TERM 1441 1159768 - 1159782 + r 80 -7.2 -4.49389 | overlap 1159755 AGGTCAAAAACATTT TTTCAC TTG GTGAAA TTTTCCTTCTGAAAT SPy_1398 1160340 - 1159756 - | putative 16S pseudouridylate synthetase nagB 1161163 - 1160459 - | putative N-acetylglucosamine-6-phosphate isomerase queA 1161365 - 1162393 + | S-adenosylmethionine:tRNA ribosyltransferase-isomerase SPy_1401 1162400 - 1163620 + | hypothetical protein TERM 1442 1163655 - 1163630 - T 100 -11.2 -4.67904 | opp_overlap 1163630 CATTAATCTCAAAAA GCTTGACCTG AAGAAA CAGGCCAAGC TTTTTTAATGAGCAA TERM 1443 1163630 - 1163655 + T 95 -9 -5.14563 | opp_overlap 1163630 CATTAATCTCAAAAA GCTTGACCTG AAGAAA CAGGCCAAGC TTTTTTAATGAGCAA SPy_1402 1164324 - 1163734 - | hypothetical protein SPy_1404 1164569 - 1164321 - | hypothetical protein SPy_1405 1164781 - 1164554 - | hypothetical protein TERM 1444 1164751 - 1164762 + g 76 -4.4 -5.08731 | TTCCTAAAATAATCC CTAC AATG GTAG TTTTCTTCTTTCTTA TERM 1445 1164936 - 1164916 - R 100 -9.8 -5.13521 | AAAGCACTTAAAAAA CCAATCTC TTTTT GAGATTGG AAACCCTTTTCTTAT sodA 1165553 - 1164948 - | superoxide dismutase (Fe/Mn) holA 1166690 - 1165650 - | DNA polymerase III subunit delta TERM 1446 1166388 - 1166399 + g 79 -3.6 -5.45802 | opp_overlap 1166379, overlap 1166379 TAAATAGGCTTCAAA GGCC TTTA GGTC TTTTTCTTTTAAGAA comEC 1169004 - 1166761 - | putative competence protein TERM 1447 1167189 - 1167171 - G 76 -11 -2.5294 | overlap 1167170 1167168 CACTTCCCATAATAG GCAACTGG TCT CCAGCTGC TAAAACCCTAACGTG TERM 1448 1167399 - 1167435 + g 73 -7.2 -4.07568 | GAATTAAGGTTTTCT GAGCATTAGCTACGTG ATGTC CTCGTCGCCAGTGCTC TTTTGAAGAAAAGAA TERM 1449 1167649 - 1167639 - G 89 -5.4 -5.39755 | overlap 1167646 GATAATCATAAAAAA TAGC GAA GCTA ATCACCAAGATAAGC comEA 1169647 - 1168985 - | putative competence protein SPy_1410 1170665 - 1169847 - | 1-acyl-sn-glycerol-3-phosphate acyltransferase TERM 1450 1171054 - 1171025 - g 70 -2.9 -5.1101 | gap 1, opp_overlap 1171026, overlap 1171026 TGATGATTTAAAAAA CCTCCTAAACCATG TGC CACG-TTCAGGAGT TGATTTGATGCTCTG SPy_1411 1170705 - 1171481 + | hypothetical protein SPy_1412 1171471 - 1171749 + | hypothetical protein TERM 1451 1171743 - 1171767 + T 93 -7.3 -5.71983 | opp_overlap 1171743, overlap 1171732 AAAAGAAAAGAAAAA TCATTGAGA CTTATCA TCTCAATGA TTTTTTTATGCTTCA TERM 1452 1171767 - 1171743 - T 93 -8 -5.70761 | opp_overlap 1171732 1171743 AAAAGAAAAGAAAAA TCATTGAGAC TTATC ATCTCAATGA TTTTTTTATGCTTCA SPy_1414 1173773 - 1171773 - | putative cation (K+) transport protein TERM 1453 1173898 - 1173865 - R 93 -9.1 -4.37658 | opp_overlap 1173872, overlap 1173872 AACTTTTTCAGAAAA TTAAAAAGAGCTGAC TCTC ATCAACTCTCTTTAA GCTTATTCACCTTTG TERM 1454 1173891 - 1173872 - R 77 -5 -5.1417 | opp_overlap 1173872, overlap 1173865 TCAGAAAATTAAAAA GAGCTGAC TCTC ATCAACTC TCTTTAAGCTTATTC deaD 1175520 - 1173901 - | putative ATP-dependent RNA helicase prfC 1177371 - 1175827 - | peptide chain release factor 3 TERM 1455 1177580 - 1177557 - R 75 -9.6 -2.60032 | opp_overlap 1177557, overlap 1177556 1177555 1177559 TTTTTTTTAAAAATC GAGCCTGGAA ATCA TCCCAGACTC TTCTTATTATAGCTG SPy_1419 1178314 - 1177619 - | hypothetical protein TERM 1456 1178370 - 1178382 + r 74 -6.3 -4.38712 | opp_overlap 1178369 CATGAGAGAACAAGC CTTTC TCT GAAAG TTTTATAAAAATCAA murF 1179785 - 1178394 - | putative D-Ala-D-Ala adding enzyme TERM 1457 1178833 - 1178846 + g 72 -3.1 -5.05782 | gap 1, opp_overlap 1178831 1178833, overlap 1178831 TCTGACAAAATATCA GCA-CC ATT GGCTGC TTTTTTCCACTCCGT TERM 1458 1179417 - 1179436 + g 75 -9.4 -3.29704 | overlap 1179414 AGTTTTGTAAGTGGT TGATAGGA CAGC TCCTATCA TATCTTTGGTGGAAG ddl 1181022 - 1179976 - | D-alanyl-alanine synthetase A TERM 1459 1180171 - 1180159 - G 72 -3.3 -5.06414 | overlap 1180166 TTGGGTCAAGAAAAA GTCAC AAC GGGAC AACCCACAACCACCT recR 1181719 - 1181123 - | recombination protein RecR SPy_1424 1183297 - 1182518 - | putative formate dehydrogenase TERM 1460 1183361 - 1183392 + r 72 -8.1 -3.47841 | gap 1, opp_overlap 1183361 1183363 1183366, overlap 1183363 AATTTTCCTAAAAAA TG-CAAGCCCTTTC AACAA GAAAGGGCTCGTCA TTATCATATAACTAT TERM 1461 1183392 - 1183361 - R 100 -10.3 -5.01732 | gap 1, opp_overlap 1183361 1183363, overlap 1183363 1183366 AATTTTCCTAAAAAA TG-CAAGCCCTTTC AACAA GAAAGGGCTCGTCA TTATCATATAACTAT TERM 1462 1183389 - 1183363 - R 87 -13.1 -2.75708 | opp_overlap 1183363 1183361, overlap 1183361 1183366 TTTTCCTAAAAAATG CAAGCCCTTTC AACAA GAAAGGGCTCG TCATTATCATATAAC TERM 1463 1183363 - 1183389 + r 81 -10.9 -2.88069 | opp_overlap 1183361 1183363 1183366, overlap 1183361 TTTTCCTAAAAAATG CAAGCCCTTTC AACAA GAAAGGGCTCG TCATTATCATATAAC TERM 1464 1183386 - 1183366 - R 89 -11.2 -3.52177 | opp_overlap 1183363 1183361, overlap 1183363 1183361 TCCTAAAAAATGCAA GCCCTTTC AACAA GAAAGGGC TCGTCATTATCATAT SPy_1425 1183963 - 1183421 - | hypothetical protein TERM 1465 1183917 - 1183906 - G 70 -5.8 -4.42238 | TTATCGGAATCAAAA TCGC AAAT GCGA CCAAAATAGAGGTAT SPy_1427 1184645 - 1184124 - | putative transcriptional regulator TERM 1466 1184751 - 1184720 - R 89 -11 -3.61902 | opp_overlap 1184728, overlap 1184728 TCTTAGGATATAGAA CCAAAAAACCAGAC CAAA GTCTGGTTTTTAAG TTATTCACCACCAAG TERM 1467 1184728 - 1184743 + r 93 -9 -4.8143 | opp_overlap 1184720 1184728 TATAGAACCAAAAAA CCAGAC CAAA GTCTGG TTTTTAAGTTATTCA TERM 1468 1184743 - 1184728 - R 95 -9 -5.35354 | opp_overlap 1184728, overlap 1184720 TATAGAACCAAAAAA CCAGAC CAAA GTCTGG TTTTTAAGTTATTCA TERM 1469 1184776 - 1184790 + r 70 -3.6 -4.84274 | overlap 1184777 ACCAAGGTAGTATTC TTTAAC AAT GTTAAG TTTTTCATCTAATTC gpmA 1185447 - 1184752 - | phosphoglyceromutase TERM 1470 1186038 - 1186028 - g 73 -6.8 -4.18094 | GAAACCATTTTAAAA GCCA TCA TGGC TTCAGATTATGAGGG TERM 1471 1186052 - 1186070 + G 71 -6 -4.1822 | GCTTCAGATTATGAG GGTCTAGT GGA ACTAAACC TTTCTTGCCCTAACG pyrD 1185686 - 1186621 + | dihydroorotate dehydrogenase 1A TERM 1472 1186672 - 1186639 - T 100 -14.1 -5.1615 | gap 1, opp_overlap 1186639 TTAATAGTCAAAAAA GCTTGGAAATGTGCAC TTT GTACAC-TTTCCAAGC TTTTTAAAATGGGAA TERM 1473 1186639 - 1186672 + T 100 -12.7 -4.62069 | gap 1, opp_overlap 1186639 TTAATAGTCAAAAAA GCTTGGAAA-TGTGCA CTT TGTACACTTTCCAAGC TTTTTAAAATGGGAA SPy_1434 1188783 - 1186921 - | putative heavy metal-transporting ATPase TERM 1474 1189115 - 1189074 - H 100 -11.1 -5.88197 | opp_overlap 1189077 1189078, overlap 1189077 1189078 CCAAATATAAAAAAA GAACCTTGTCGCTATCAAT AAAC ATCGATAGCAACAAGATTT TTCTAGACGAATTAT TERM 1475 1189112 - 1189077 - H 100 -12.8 -4.94703 | opp_overlap 1189077 1189078, overlap 1189074 1189078 AATATAAAAAAAGAA CCTTGTCGCTATCAAT AAAC ATCGATAGCAACAAGA TTTTTCTAGACGAAT TERM 1476 1189077 - 1189112 + H 77 -6.2 -4.83169 | opp_overlap 1189077 1189074 1189078, overlap 1189078 AATATAAAAAAAGAA CCTTGTCGCTATCAAT AAAC ATCGATAGCAACAAGA TTTTTCTAGACGAAT TERM 1477 1189111 - 1189078 - H 100 -14.1 -3.53161 | opp_overlap 1189078 1189077, overlap 1189077 1189074 ATATAAAAAAAGAAC CTTGTCGCTATCAAT AAAC ATCGATAGCAACAAG ATTTTTCTAGACGAA TERM 1478 1189078 - 1189111 + H 81 -9.7 -3.49419 | opp_overlap 1189077 1189074 1189078, overlap 1189077 ATATAAAAAAAGAAC CTTGTCGCTATCAAT AAAC ATCGATAGCAACAAG ATTTTTCTAGACGAA TERM 1479 1189573 - 1189541 - H 82 -9.6 -3.61438 | opp_overlap 1189540 1189539 1189549, overlap 1189536 1189539 1189544 1189549 TTACAGGAAATAATA TAATTAAATTTAAA GGTCG TTTAAATTTAATTA ACATCTTTTTTGTTA TERM 1480 1189570 - 1189544 - H 73 -6.9 -3.92071 | opp_overlap 1189540 1189539 1189549, overlap 1189536 1189541 1189539 1189549 CAGGAAATAATATAA TTAAATTTAAA GGTCG TTTAAATTTAA TTAACATCTTTTTTG TERM 1481 1189841 - 1189860 + G 71 -5 -4.63218 | opp_overlap 1189841 CAGAAAAATTAGAAA TTTCCCTG ATAC CACGGAAA TTTTGTTAGGAACGA mf3 1189728 - 1190534 + | putative deoxyribonuclease TERM 1482 1190575 - 1190615 + F 93 -10.8 -4.06491 | opp_overlap 1190575 TCTAGATTGTGAACA TTATCCCAAATGTTAGAT TATTT ATTTAATATTTGGGGTAA TTTGTATAAAGTTAA SPy_1437 1190754 - 1191239 + | hypothetical protein TERM 1483 1191258 - 1191279 + T 83 -7.2 -4.76963 | opp_overlap 1191258, overlap 1191253 CTTAAACACAAAAAA CCGCCCTC GATTAA GAGAGCGG TTTTGTCTTATCTAA TERM 1484 1191279 - 1191258 - T 100 -9.4 -5.56264 | opp_overlap 1191258 1191253 CTTAAACACAAAAAA CCGCCCTC GATTAA GAGAGCGG TTTTGTCTTATCTAA SPy_1438 1192514 - 1191309 - | hypothetical protein TERM 1485 1192390 - 1192417 + g 71 -7.6 -3.94381 | opp_overlap 1192378 1192387 1192385, overlap 1192391 ATACCAAACAGAGCG TTGTGTGGGGCA TGTT TGCCCCACCCGC TTTCTAAGATTGTCT TERM 1486 1192391 - 1192416 + g 78 -11.1 -2.95906 | opp_overlap 1192378 1192387 1192385, overlap 1192390 TACCAAACAGAGCGT TGTGTGGGGCA TGTT TGCCCCACCCG CTTTCTAAGATTGTC SPy_1440 1192857 - 1192630 - | putative holin - phage associated SPy_1441 1193129 - 1192854 - | hypothetical protein TERM 1487 1192890 - 1192908 + g 76 -4.7 -5.02715 | CATATCTTTTAAATC TTTAACA TCATC TGTTAAA TTTTTAATTTGCTCT TERM 1488 1192948 - 1192977 + g 82 -8.6 -4.16943 | gap 1 ATCAACGTTTTATTT TGCTCAGCGTGCT CTTCA AGC-CGCCGAGCA TTTTGGCGTGTAACA SPy_1442 1193756 - 1193139 - | hypothetical protein SPy_1443 1194190 - 1193759 - | hypothetical protein TERM 1489 1193944 - 1193975 + g 77 -5.2 -4.93296 | gap 1, overlap 1193932 GTAGGCCGTTGAACT CGTCGAGTTTAGCGG GGT CTGCTA-GCTTGATG TTTTTGTGCTCATCA SPy_1444 1195986 - 1194202 - | hypothetical protein TERM 1490 1195782 - 1195746 - G 76 -10.9 -2.74144 | opp_overlap 1195746 1195749, overlap 1195745 CTTTTAGCTGTAAAT CAAGCTCTTTGACCTGC TGA GCTAGTCCAAAAGCTTG TTGAGTGGTAACTTT hylP3 1197113 - 1196001 - | hyaluronidase - phage associated TERM 1491 1196912 - 1196927 + g 74 -9 -3.5936 | overlap 1196910 CTCCAGTTTTACCTT GGAGAC CAGT GTCTCC TTTAGGACCTTTGGG SPy_1446 1199071 - 1197113 - | hypothetical protein TERM 1492 1198519 - 1198535 + g 83 -5.1 -5.20333 | TGATAGTATCTGTTT CCTCATA AGA TTTGAGG TTTTTCTTGTACATG SPy_1447 1199763 - 1199068 - | hypothetical protein TERM 1493 1199691 - 1199669 - G 76 -7 -4.37886 | overlap 1199670 1199672 TCATTTTCGACAAAA CTAGGGGATA GAA TATCCCCCAC ATCGTAACCGGTCAA TERM 1494 1199690 - 1199670 - G 75 -10.5 -3.2241 | overlap 1199669 1199672 CATTTTCGACAAAAC TAGGGGATA GAA TATCCCCCA CATCGTAACCGGTCA TERM 1495 1199688 - 1199672 - G 79 -10.9 -3.1733 | overlap 1199670 1199669 TTTTCGACAAAACTA GGGGATA GAA TATCCCC CACATCGTAACCGGT SPy_1448 1202117 - 1199760 - | hypothetical protein TERM 1496 1200956 - 1200940 - G 77 -5 -4.91712 | GCGAAGTTAGAAAAA CCTGCC TGTAG GGCTGG TAAAATTGCTGAAAT SPy_1449 1202488 - 1202117 - | hypothetical protein TERM 1497 1202419 - 1202395 - G 100 -12.2 -4.82154 | opp_overlap 1202395 1202397 AACCGACAGCAAAAA CAGCCACCTG ATAAG CAGGTAGCTG TCTGTAATCATATAT TERM 1498 1202395 - 1202419 + g 75 -10 -2.97456 | opp_overlap 1202395, overlap 1202397 AACCGACAGCAAAAA CAGCCACCTG ATAAG CAGGTAGCTG TCTGTAATCATATAT TERM 1499 1202518 - 1202534 + r 80 -6.7 -4.65182 | opp_overlap 1202517 CTAGTTTTTTAAATC TTTTTGA CTT TCAAAAA TTTCTTTGATTTCTA SPy_1450 1202766 - 1202503 - | hypothetical protein SPy_1451 1203370 - 1202777 - | putative structural protein - phage associated SPy_1452 1203717 - 1203382 - | hypothetical protein TERM 1500 1203609 - 1203574 - G 76 -7.6 -4.20136 | opp_overlap 1203575, overlap 1203575 ACTTTGAAAAGCAAA CGTGGAACTTAGCAAA TGAT TTTGCTTAGCCCCACT AGTCTTTTCTAAGAT TERM 1501 1203608 - 1203575 - G 79 -11.1 -3.11359 | opp_overlap 1203575, overlap 1203574 CTTTGAAAAGCAAAC GTGGAACTTAGCAAA TGAT TTTGCTTAGCCCCAC TAGTCTTTTCTAAGA TERM 1502 1203625 - 1203645 + g 82 -6.2 -4.87626 | AGTCTTTTCTAAGAT GATGAATC GTGCA GGTTCATC TTTTTGATGTTCAAA TERM 1503 1203687 - 1203665 - G 89 -5.6 -5.42259 | gap 1, opp_overlap 1203669 TGATGTTCAAAAAAA GACG-GCAC ATCTAA GTGCTCGTC TAAATATTTTTTGAT SPy_1453 1203954 - 1203718 - | hypothetical protein SPy_1454 1204276 - 1203947 - | hypothetical protein SPy_1455 1204667 - 1204245 - | hypothetical protein SPy_1456 1204877 - 1204677 - | hypothetical protein SPy_1457 1205788 - 1204877 - | putative structural protein - phage associated TERM 1504 1205018 - 1205028 + g 75 -5.4 -4.68908 | ACCGTATTTAATGAT TTCC ATT GGAA TTTGTTTTGCATAAC SPy_1459 1206274 - 1205813 - | hypothetical protein TERM 1505 1206347 - 1206334 - R 82 -4.5 -5.55664 | opp_overlap 1206309 1206334 TTAGCAGTAAAAAAA CACCC TTTC GGATG TCGTTTTTTAACAGC SPy_1460 1207770 - 1206355 - | hypothetical protein TERM 1506 1207845 - 1207830 - R 79 -5.4 -5.19328 | opp_overlap 1207830 1207842 AGGGCACAATAAAAA GCCGTA TTGC TACGAC TTTGATTTCTAAAGG SPy_1461 1208146 - 1207880 - | hypothetical protein SPy_1462 1208399 - 1208139 - | hypothetical protein TERM 1507 1208367 - 1208347 - GR 80 -6.2 -4.77165 | gap 1, opp_overlap 1208347 TTGGGCATAAGAAAA GCACC-AGA TTGC TCTAGGTGC TTAATATATTGCGTT SPy_1463 1208592 - 1208368 - | hypothetical protein SPy_1464 1210091 - 1208598 - | hypothetical protein SPy_1465 1211352 - 1210084 - | putative structural protein - phage associated TERM 1508 1211335 - 1211310 - G 87 -8.3 -4.59773 | CTCCAGTTTTAAAAA GAGCTAACTTC CTAC GAAGATAGCCC ATACCCATATAATTC SPy_1466 1211705 - 1211349 - | hypothetical protein SPy_1468 1212198 - 1211854 - | hypothetical protein TERM 1509 1212155 - 1212171 + g 91 -6.5 -5.37043 | opp_overlap 1212155 1212154, overlap 1212157 TTATTTCTGTCAAAT GCTACCC GGT GGGTACC TTTTTTATCTGCCCT SPy_1469 1212726 - 1212307 - | hypothetical protein TERM 1510 1212777 - 1212793 + r 95 -8.7 -5.24129 | opp_overlap 1212777, overlap 1212786 1212791 ATTATTAACTAAGGA GTCAGCT GTG AGCTGGC TTTTTTGTGGAGAAA TERM 1511 1212786 - 1212817 + r 71 -6.6 -4.18638 | opp_overlap 1212777, overlap 1212777 1212791 TAAGGAGTCAGCTGT GAGCTGGCTTTTTT GTGG AGAAAAGCCCTCTC TTCCTTTTTTTTATT SPy_1470 1213629 - 1212994 - | hypothetical protein SPy_1471 1213900 - 1213631 - | hypothetical protein SPy_1473 1214496 - 1213984 - | hypothetical protein TERM 1512 1214260 - 1214281 + g 76 -2.3 -5.44119 | gap 1, overlap 1214261 TTTAAGCATGGATTG CT-GGTTAGG TCC CATAACCGAG TTTTTTTCGACTGCG SPy_1474 1214906 - 1214493 - | hypothetical protein SPy_1475 1215808 - 1215011 - | hypothetical protein TERM 1513 1215072 - 1215091 + g 74 -4.2 -5.06451 | opp_overlap 1215072 TCGCATTTTCCACAA GGCTTAGG CTTT TCTATGCC TTTTTTAACGTCATC TERM 1514 1215518 - 1215529 + g 76 -4.4 -5.0538 | AATCATCTGTTCTGC GACT AAAT AGTC TTTTTTGAGCTGACC SPy_1476 1216001 - 1215801 - | hypothetical protein SPy_1477 1216987 - 1215998 - | putative recombinase - phage associated SPy_1478 1217319 - 1216987 - | hypothetical protein SPy_1479 1217581 - 1217375 - | hypothetical protein SPy_1481 1217960 - 1217727 - | hypothetical protein SPy_1482 1218327 - 1217941 - | hypothetical protein SPy_1483 1219001 - 1218816 - | hypothetical protein xis 1219314 - 1219003 - | putative excisionase TERM 1515 1219366 - 1219383 + r 89 -7.7 -5.25699 | TATTTTTTGTTTGGA GTCCGAT TCCC GTCGGAC TTTTTATTATCTAAT TERM 1516 1219447 - 1219471 + r 100 -11.5 -4.72863 | opp_overlap 1219450 TGTTTACATTGAATC GAAGTCTATCC TTT GGATGGGCTTC TTTTAGTTTCTTTAC TERM 1517 1219556 - 1219582 + r 87 -10.4 -3.82067 | opp_overlap 1219563, overlap 1219558 CATGTGTGTCCTTTC TACTATATGATT TTA AATCATATAGTG TTTAAAATTTTTGTG TERM 1518 1219558 - 1219580 + r 87 -10.8 -3.47713 | opp_overlap 1219563, overlap 1219556 TGTGTGTCCTTTCTA CTATATGATT TTA AATCATATAG TGTTTAAAATTTTTG SPy_1485 1219796 - 1219584 - | putative Cro-like repressor protein - phage associated TERM 1519 1220368 - 1220355 - g 73 -2.4 -5.26918 | ATATTCGATAAAAAA TCTG AGGAGA CAGA AGATTATATCACTGA SPy_1486 1219998 - 1220753 + | putative repressor - phage associated SPy_1487 1220765 - 1221283 + | hypothetical protein TERM 1520 1221326 - 1221291 - f 84 -5.4 -5.5604 | TCAACTAACAAAAAA GCCCCACGCTCA AATTTGGCGAGG AGAGCGTGAGGC GAATCTAGTATAGTA int2 1221407 - 1222549 + | putative integrase - phage associated TERM 1521 1222582 - 1222627 + T 76 -9.8 -2.93769 | opp_overlap 1222587, overlap 1222587 TACCCCCTGAACACA AAAAAGCCCACTGCACAGGC TACAAC GCTTGTACAATGGGCTTTTA TATATGCAATTATTT TERM 1522 1222622 - 1222587 - T 100 -11.9 -5.47159 | opp_overlap 1222582 1222587 CCTGAACACAAAAAA GCCCACTGCACAGGC TACAAC GCTTGTACAATGGGC TTTTATATATGCAAT TERM 1523 1222587 - 1222622 + T 100 -9.7 -4.61199 | opp_overlap 1222587, overlap 1222582 CCTGAACACAAAAAA GCCCACTGCACAGGC TACAAC GCTTGTACAATGGGC TTTTATATATGCAAT hlpA 1222912 - 1222637 - | histone-like DNA-binding protein SPy_1491 1223598 - 1223011 - | hypothetical protein SPy_1492 1224436 - 1223576 - | hypothetical protein SPy_1493 1225250 - 1224411 - | hypothetical protein TERM 1524 1224616 - 1224628 + gr 74 -4.9 -4.67982 | overlap 1224623 AGGTAACTATCTAAC CATTT CGT AAATG TTTTATTACCTCGAC TERM 1525 1225450 - 1225409 - R 74 -5.9 -4.64591 | gap 1, opp_overlap 1225409 TAACGAGATACAAAA CGAGGCAAAAGT-CAACCTT TTC ACGCTTGAACATTTGCCCCG TCTTTTACAACTACA SPy_1494 1226419 - 1225478 - | hypothetical protein TERM 1526 1225574 - 1225584 + g 83 -3.2 -5.61881 | CCTCTCTCCCGTTTG TGGC AGG GCTA TTTTTCTTTTTGCAA TERM 1527 1226603 - 1226577 - R 78 -7.4 -4.09285 | overlap 1226579 TATGAAAATATCAAA TACCAAACATAA TCT TAATGTTTGGCA AGTAGTTCACGAGCC TERM 1528 1226601 - 1226579 - R 71 -7.8 -3.62411 | overlap 1226577 TGAAAATATCAAATA CCAAACATAA TCT TAATGTTTGG CAAGTAGTTCACGAG recN 1228252 - 1226591 - | putative DNA repair and genetic recombination protein TERM 1529 1226762 - 1226748 - G 77 -5 -4.99043 | overlap 1226750 TCTTTAGAAATAAAA TACTGA TAA TCAGCA ATAGCAATAACTTGA SPy_1496 1228744 - 1228274 - | putative repressor protein TERM 1530 1228652 - 1228629 - G 71 -9.6 -2.84325 | opp_overlap 1228632, overlap 1228626 1228624 TCTCTTGAAATAGTA GCCTGGGTTA ATTC TAACCCATGC TCTGCCAATAATCTT hlyA1 1229558 - 1228731 - | putative hemolysin fps 1230423 - 1229551 - | putative geranyltranstransferase (farnesyl diphosphate synthase) xseB 1230638 - 1230423 - | exodeoxyribonuclease VII small subunit TERM 1531 1230462 - 1230475 + g 76 -3.1 -5.25803 | GCCATCAGCTTGCAT CACTT TGAC GAGTG TTTTTTCTGCCGCTT xseA 1231956 - 1230616 - | exodeoxyribonuclease VII large subunit TERM 1532 1231746 - 1231761 + g 80 -4.7 -5.26316 | TTTTCATGCCTTCTT CTAGG TCGAAT CCTAG TTTTTTATAGACTCC TERM 1533 1232075 - 1232056 - R 91 -2.8 -5.98675 | opp_overlap 1232057, overlap 1232057 CAGAAAAACAAAAAA GGAAGCCA TTGC TGACTTCT TATATTCTCTTATGT TERM 1534 1232074 - 1232057 - R 71 -6.3 -4.15545 | opp_overlap 1232057, overlap 1232056 AGAAAAACAAAAAAG GAAGCCA TTGC TGACTTC TTATATTCTCTTATG folD 1232963 - 1232109 - | putative bifunctional methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase SPy_1503 1234865 - 1233171 - | putative phosphomannomutase TERM 1535 1233603 - 1233617 + g 73 -7.8 -3.85698 | opp_overlap 1233603 TACAATCATCATAGA GGCGCT AAC AGCGTC TTTGTCACGAACAAA TERM 1536 1234284 - 1234300 + g 71 -5.1 -4.63675 | overlap 1234281 1234285 AAGTCCACTGTCCAG AGCCTTT TCA AAAGGCA TTTGTTTGATTTCCT TERM 1537 1234285 - 1234299 + g 70 -8.6 -3.36578 | overlap 1234284 1234281 AGTCCACTGTCCAGA GCCTTT TCA AAAGGC ATTTGTTTGATTTCC phr 1236452 - 1235043 - | putative deoxyribodipyrimidine photolyase TERM 1538 1235321 - 1235305 - G 90 -10.9 -4.2142 | AATATTCTAAAATAA GGAACAG CAT CTGTTCC AGTGGAAGCAGCCCA TERM 1539 1236544 - 1236586 + r 100 -24 -3.14463 | opp_overlap 1236544 1236552, overlap 1236552 AAATGCCTTAGCAAA TTATAAAAGGAAGTCCTAAA TCA TTTAGGACTTCCTTTTATAA TTCATAGAACAGATT TERM 1540 1236586 - 1236544 - R 100 -24 -3.73968 | opp_overlap 1236544 1236552, overlap 1236552 AAATGCCTTAGCAAA TTATAAAAGGAAGTCCTAAA TCA TTTAGGACTTCCTTTTATAA TTCATAGAACAGATT TERM 1541 1236578 - 1236552 - R 100 -16.8 -4.63172 | opp_overlap 1236544 1236552, overlap 1236544 TAGCAAATTATAAAA GGAAGTCCTAAA TCA TTTAGGACTTCC TTTTATAATTCATAG TERM 1542 1236552 - 1236578 + r 100 -16.8 -4.56607 | opp_overlap 1236552 1236544, overlap 1236544 TAGCAAATTATAAAA GGAAGTCCTAAA TCA TTTAGGACTTCC TTTTATAATTCATAG SPy_1506 1237335 - 1236601 - | putative amino acid ABC transporter ATP-binding protein SPy_1507 1238021 - 1237335 - | putative amino acid ABC transporter (permease protein) TERM 1543 1238136 - 1238106 - R 83 -10.6 -3.30007 | opp_overlap 1238112 1238114 1238132, overlap 1238114 AATACTTTTTGACAA TAAAAAAACCTGCC TCA GGCAAGTCTCTTTA CTATGTCAAGCTTAA TERM 1544 1238128 - 1238114 - R 100 -7.8 -5.88565 | opp_overlap 1238114 1238112, overlap 1238106 TTGACAATAAAAAAA CCTGCC TCA GGCAAG TCTCTTTACTATGTC SPy_1508 1238378 - 1238148 - | hypothetical protein clpE 1238676 - 1240958 + | putative ATP-dependent protease TERM 1545 1240967 - 1240994 + F 77 -5.6 -5.01546 | opp_overlap 1240969 1240971 1240984, overlap 1240969 CGATTAACGTTAGCT AAGAGAGTTTCT ATAA GGAGACTCTCTC TTTTTCTATCAATTT TERM 1546 1240969 - 1240992 + F 81 -8.2 -4.11744 | opp_overlap 1240969 1240971 1240984, overlap 1240967 ATTAACGTTAGCTAA GAGAGTTTCT ATAA GGAGACTCTC TCTTTTTCTATCAAT mutT 1241086 - 1241541 + | putative mutator protein SPy_1511 1241592 - 1241894 + | hypothetical protein TERM 1547 1241943 - 1241920 - T 100 -10.4 -4.55287 | opp_overlap 1241920 GCTATTCAGACAAAA CTTAGCCCTT CTAA AAGAGCTAAG TTTTTTTATTAGCGA TERM 1548 1241920 - 1241943 + T 100 -8.2 -5.7946 | opp_overlap 1241920 GCTATTCAGACAAAA CTTAGCCCTT CTAA AAGAGCTAAG TTTTTTTATTAGCGA TERM 1549 1242095 - 1242118 + T 90 -11 -3.85505 | opp_overlap 1242095 AGCTCTACTAAAAAA CCATCAGGTC CTAA GACCCGATGG TTGTCTTCTTACTCA TERM 1550 1242118 - 1242095 - T 100 -13.2 -5.14965 | opp_overlap 1242095 AGCTCTACTAAAAAA CCATCAGGTC CTAA GACCCGATGG TTGTCTTCTTACTCA ileS 1244960 - 1242159 - | isoleucyl-tRNA synthetase divIVAS 1245991 - 1245233 - | cell-division initiation protein (septum placement) SPy_1515 1246792 - 1246001 - | RNA binding protein SPy_1516 1247046 - 1246792 - | hypothetical protein SPy_1518 1247707 - 1247051 - | hypothetical protein SPy_1519 1248390 - 1247719 - | hypothetical protein ftsZ 1249712 - 1248393 - | cell division protein FtsZ ftsA 1251100 - 1249736 - | cell division protein TERM 1551 1251097 - 1251086 - G 73 -2.2 -5.243 | CAAACCAGTAAAAAA GCCA TTTC TAGC CATTCACTTGACCTC TERM 1552 1251191 - 1251212 + r 100 -10.3 -5.60689 | opp_overlap 1251191 TATACCATAAAAAAA CGTAAAATG TTAT CATTTTACG TTTTTTGTTATATAA TERM 1553 1251212 - 1251191 - R 100 -10.3 -5.69473 | opp_overlap 1251191 TATACCATAAAAAAA CGTAAAATG TTAT CATTTTACG TTTTTTGTTATATAA divIB 1252460 - 1251312 - | cell division protein TERM 1554 1252248 - 1252258 + g 73 -5.4 -4.49344 | TTCTGACTCAATTTC CTGA CTA TCAG TTTTCTCATCAGTTT murG 1253564 - 1252461 - | N-acetylglucosaminyl transferase murD 1254901 - 1253543 - | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase TERM 1555 1255214 - 1255185 - R 100 -9.5 -5.2189 | gap 1, opp_overlap 1255185 1255180 TGAACTATTAAAAAA GGACTGATATTGTC TAA AACAA-ATCAGTCC TTTTATCGTATAAAA TERM 1556 1255185 - 1255214 + r 89 -8.8 -4.50976 | gap 1, opp_overlap 1255185, overlap 1255180 TGAACTATTAAAAAA GGACTGATATTGT CTAAA ACAA-ATCAGTCC TTTTATCGTATAAAA TERM 1557 1255258 - 1255281 + r 72 -2.6 -5.31519 | overlap 1255247 ATCTTTAAGTATTTT TATTTAAGTA TTTT TATTTAAGTA TTTTTATTTAACTCT SPy_1526 1255536 - 1255285 - | hypothetical protein TERM 1558 1255627 - 1255583 - R 78 -10.4 -2.76737 | opp_overlap 1255584 TAGGAACTTGTAAAC GCAAAAAGACCTTTAAAAAA TGACT TTTCTTAAATATCTTTTTGC TATTTTATTTAGTTA SPy_1527 1257499 - 1255658 - | putative GTP-binding protein TypA/BipA (tyrosine phosphorylated protein A) SPy_1528 1258071 - 1257682 - | hypothetical protein glcK 1259052 - 1258081 - | glucose kinase SPy_1530 1259260 - 1259057 - | hypothetical protein TERM 1559 1259232 - 1259215 - G 83 -4.9 -5.33026 | opp_overlap 1259215 CAAGGTAAACAAAAA TGCCAAA GTTT TTTAGCA ATTGTTGCACATCAT TERM 1560 1259379 - 1259356 - R 84 -6.1 -5.26316 | opp_overlap 1259356 TGATTCCATAAAAAA GAAGCCAAT TTTATC ATTGACTTC TTTTATCCTAAGGCA dpr 1259929 - 1259402 - | putative peroxide resistance protein TERM 1561 1259428 - 1259448 + g 70 -2.5 -5.04385 | overlap 1259431 1259432 GGCCTTGTCCACGCT CTGCTTGGA GCA TCCAAATGG TTTTTTCAGCCTCTG TERM 1562 1259671 - 1259661 - G 73 -8.2 -3.80733 | GCTAGGGTAGAATAA GGCG CTC CGCC AATAGTGATCAAACG SPy_1532 1260157 - 1260783 + | hypothetical protein TERM 1563 1260818 - 1260797 - T 95 -8.8 -5.37043 | opp_overlap 1260796 1260795 AGGCCAGATAAAAAA CCTAGTCA TTTTAG TGACTAGG AATATTTTGTCATCA SPy_1533 1261944 - 1260865 - | hypothetical protein SPy_1534 1262592 - 1261948 - | hypothetical protein TERM 1564 1262544 - 1262555 + g 70 -3 -5.14819 | TATTATAGTTGTACA TTTC TGGC GAAA TTTCTTTTTTCATTT SPy_1535 1263993 - 1263016 - | putative ribose transport operon repressor TERM 1565 1264351 - 1264303 - R 76 -4.5 -5.08824 | opp_overlap 1264303 1264304, overlap 1264304 GTTTTATGTAAAAAA TGATTGAACCCAAAAGACTGGTC AAG GATCTGTCTATCTGGTTCAACCG TTTTTTATGAGTTAA TERM 1566 1264303 - 1264351 + r 79 -4.5 -5.31456 | opp_overlap 1264303 1264304, overlap 1264304 GTTTTATGTAAAAAA TGATTGAACCCAAAAGACTGGTC AAG GATCTGTCTATCTGGTTCAACCG TTTTTTATGAGTTAA TERM 1567 1264350 - 1264304 - R 73 -8 -3.64812 | opp_overlap 1264304 1264303, overlap 1264303 TTTTATGTAAAAAAT GATTGAACCCAAAAGACTGGTC AAG GATCTGTCTATCTGGTTCAACC GTTTTTTATGAGTTA SPy_1536 1265444 - 1264407 - | hypothetical protein TERM 1568 1264603 - 1264574 - G 70 -5.7 -4.36592 | opp_overlap 1264574, overlap 1264577 TCGGAACAAAAAATA TATCTGCACCAGC TTCA GCTGCTGCAACTA CTTTAAGACCTGCAC coaD 1265922 - 1265431 - | phosphopantetheine adenylyltransferase SPy_1538 1266451 - 1265912 - | hypothetical protein asnA 1267566 - 1266574 - | asparagine synthetase AsnA TERM 1569 1267747 - 1267714 - R 100 -14.9 -4.37711 | opp_overlap 1267709 1267719, overlap 1267719 CTATCAAAGCTAAAA GAAAAGGCTAATTCT CAAT AAAATTAGCCTTTTC TAATACTATTATTGT TERM 1570 1267719 - 1267742 + r 76 -6.8 -4.50583 | opp_overlap 1267714 1267719, overlap 1267709 AAAGCTAAAAGAAAA GGCTAATTCT CAAT AAAATTAGCC TTTTCTAATACTATT TERM 1571 1267742 - 1267719 - R 95 -9 -5.14698 | opp_overlap 1267719 1267709, overlap 1267714 AAAGCTAAAAGAAAA GGCTAATTCT CAAT AAAATTAGCC TTTTCTAATACTATT arcC 1268829 - 1267879 - | carbamate kinase SPy_1542 1270180 - 1268849 - | hypothetical protein SPy_1543 1271690 - 1270197 - | hypothetical protein TERM 1572 1271766 - 1271720 - R 83 -7.5 -4.83169 | gap 2, opp_overlap 1271720 1271723, overlap 1271723 ACCTTTTCATAAAAA TAAGCCGTTCTAGTT-CCG-GTC AAG GACGCGAAAACCAGAACGACTTG TCATGTAGTTAAAGT TERM 1573 1271763 - 1271723 - R 93 -9.2 -4.52873 | gap 2, opp_overlap 1271723 1271720, overlap 1271720 TTTTCATAAAAATAA GCCGTTCTAGTT-CCG-GTC AAG GACGCGAAAACCAGAACGAC TTGTCATGTAGTTAA arcB 1272873 - 1271860 - | ornithine carbamoyltransferase SPy_1546 1273341 - 1272913 - | hypothetical protein TERM 1574 1272997 - 1273010 + g 71 -5.3 -4.56775 | GTCCATATTCTTCTC CCATT TAAG AATGG TTTTTGCAAGGGACT sagP 1274676 - 1273441 - | arginine deiminase TERM 1575 1273896 - 1273909 + g 70 -3.1 -4.87803 | overlap 1273897 CAAAGGCCAATACTT TCTTG AAGC CAAGG TTTTGTTTAAAGATG TERM 1576 1274804 - 1274822 + r 70 -3.8 -4.855 | overlap 1274799 GCTATTTTGAGTAAT CGCTTACA TTT TTTGAGCG TTGTTTTTATTTTTA SPy_1548 1275630 - 1274950 - | hypothetical protein TERM 1577 1275507 - 1275517 + g 70 -3.2 -4.87318 | CTCCCTCAAAAAAAA GGAT ATG GTCC TTTTTAGCTTTTCGG ahrC.2 1275772 - 1276245 + | putative arginine repressor TERM 1578 1276368 - 1276325 - T 100 -10.5 -4.75404 | gap 1, opp_overlap 1276325 AAATCTCATCAAAAA GCGAGTAAACGAA-AACCTA AATGA CAGGACATTCGTTTACTCGC TTTTTGTTAACCTTC TERM 1579 1276325 - 1276368 + T 88 -7.6 -5.10208 | gap 1, opp_overlap 1276325 AAATCTCATCAAAAA GCGAGTAAACGAA-AACCT AAATGAC AGGACATTCGTTTACTCGC TTTTTGTTAACCTTC SPy_1551 1277127 - 1276411 - | hypothetical protein SPy_1552 1278220 - 1277141 - | hypothetical protein TERM 1580 1278400 - 1278415 + r 78 -7.6 -4.10161 | TGGTCATGTGGTAGC CTTCAC CATA GTGAAG TTTTAACCGCTGGTC SPy_1556 1280764 - 1280024 - | putative two-component response regulator TERM 1581 1280712 - 1280738 + g 73 -9.5 -3.25192 | opp_overlap 1280712, overlap 1280710 1280716 AAATCAACCAAAGAA CGAATACCCTG GCGCA CAAGGTATTCG TCTTCTACAATTAAC TERM 1582 1280738 - 1280712 - G 91 -11.7 -4.12947 | opp_overlap 1280712 1280710 1280716 AAATCAACCAAAGAA CGAATACCCTG GCGCA CAAGGTATTCG TCTTCTACAATTAAC TERM 1583 1280804 - 1280789 - R 73 -7.5 -3.87815 | opp_overlap 1280789 CCTTATCTTTATAAA GGGCC TTGCAT GGCCC TCTCATACTAGTCTT msrA 1281958 - 1280852 - | bifunctional methionine sulfoxide reductase A/B protein TERM 1584 1281330 - 1281353 + g 74 -3.8 -5.08601 | opp_overlap 1281336, overlap 1281322 1281336 GTCGCTTGGTTGATG TCAATATGGC AGTA GCCATTTGGA TTTTTCTTGAGGTAA SPy_1558 1282624 - 1282001 - | hypothetical protein ccdA 1283347 - 1282637 - | putative cytochrome C-type biogenesis protein TERM 1585 1283501 - 1283475 - R 83 -7.3 -4.69027 | opp_overlap 1283475 AAAGGCATGTAAAAA CCCGACCTC ATTAAAAGA GAGATCGGG TTCATCTTTCAATCC TERM 1586 1283536 - 1283518 - R 77 -10.3 -2.52896 | TCATCTTTCAATCCA CTCACCC ATGAA GGGTGAG ACGCTGTGACATTGC TERM 1587 1283602 - 1283584 - R 77 -10.3 -2.57162 | AAAAATTTCAATCCA CTCACCC ATGAA GGGTGAG ACTAAAGCAAACCTA TERM 1588 1283667 - 1283649 - R 77 -10.3 -2.53995 | ACTTATTTCAATCCA CTCACCC ATGAA GGGTGAG ACCTGATGTAATTGG TERM 1589 1283734 - 1283716 - R 77 -10.3 -2.53876 | TTTTATTTCAATCCA CTCACCC ATGAA GGGTGAG ACTGCGCCAAATGAC SPy_1561 1284178 - 1283885 - | hypothetical protein TERM 1590 1283998 - 1283978 - G 70 -2.5 -5.09762 | overlap 1283980 CCCCAATAAATAAAA GCGAATACT ATC AGTTTTCTC ATCAATGATTTGTGT SPy_1562 1285214 - 1284189 - | hypothetical protein TERM 1591 1284357 - 1284347 - G 76 -3.2 -5.25906 | ACAAATCAATAAAAA TAGC TCT GCCA TTTTCCGTCAATAAA SPy_1563 1285885 - 1285211 - | hypothetical protein SPy_1564 1286735 - 1285887 - | hypothetical protein SPy_1565 1288635 - 1286740 - | hypothetical protein SPy_1566 1289363 - 1288635 - | hypothetical protein SPy_1567 1291904 - 1289496 - | hypothetical protein TERM 1592 1290303 - 1290322 + g 71 -9.4 -2.85585 | opp_overlap 1290303 1290302, overlap 1290301 CATATTTGTCGAAAG CTGATAGA CCGG TCTATCAG TCATGTCTTTTAGCA TERM 1593 1290322 - 1290303 - G 70 -9.4 -2.72829 | opp_overlap 1290301 1290303, overlap 1290302 CATATTTGTCGAAAG CTGATAGA CCGG TCTATCAG TCATGTCTTTTAGCA TERM 1594 1290728 - 1290740 + g 72 -3.4 -5.07652 | AACTTGAAAAACGTC TCAG ATTAG CTGA TTTTGTTTTGAAAAG TERM 1595 1292051 - 1292028 - R 100 -10.4 -4.73613 | opp_overlap 1292031 CTATTAGTAAGAAAA GAACACAGTT TTTC AACTGCGTTC TAAACACTATGATTT valS 1294706 - 1292058 - | valyl-tRNA synthetase TERM 1596 1292166 - 1292192 + g 76 -4.4 -5.00884 | overlap 1292164 1292167 AACTTCTGGTTTGGC GTTGGCAACAAA GCG TTCGTTGCCGAG TTTTTTGCCGACCAT TERM 1597 1292441 - 1292455 + g 73 -8.6 -3.72743 | CACTATCTGCTGTCT TCACCA AAA TGGTGA TTGGTTTTGATGGTG SPy_1569 1295271 - 1294708 - | hypothetical protein SPy_1570 1295447 - 1295268 - | hypothetical protein TERM 1598 1295548 - 1295559 + r 71 -3 -5.1764 | GCCGTTCTGTTTCCA CTTT GGGC AAAG TTTTTCTATTATATA TERM 1599 1295657 - 1295631 - R 100 -13.8 -4.17906 | opp_overlap 1295628 AATGAAACCAAATAA TCCCTGCCTAGA TAA CCTAGACAGGGA CGAATTTCGTGTTAC SPy_1571 1296267 - 1295872 - | hypothetical protein SPy_1572 1296539 - 1296285 - | hypothetical protein TERM 1600 1296816 - 1296789 - H 93 -7.1 -5.64274 | opp_overlap 1296789 GCATCTATAAAAAAA TACTGTCCTAA TAAGAT TTAGGGCAGTA TTTTTTTATAGCTAG TERM 1601 1296789 - 1296816 + H 100 -9.3 -5.64274 | opp_overlap 1296789 GCATCTATAAAAAAA TACTGTCCTAA TAAGAT TTAGGGCAGTA TTTTTTTATAGCTAG SPy_1574 1296969 - 1298102 + | IS1548 transposase SPy_1575 1298107 - 1298292 + | hypothetical protein TERM 1602 1298379 - 1298393 + G 70 -3.6 -4.89477 | CTTTCAAAATAAGAC TTGTTC TAA GAATAA TTTTATTGTTGGACC SPy_1576 1298344 - 1299096 + | 3-deoxy-7-phosphoheptulonate synthase TERM 1603 1300197 - 1300215 + G 90 -9.6 -4.33819 | opp_overlap 1300196 1300197, overlap 1300198 AAGACGATCACCAAT TTGTCGAG AAG CTCGACAG TTTATTATAAATAGT TERM 1604 1300198 - 1300214 + G 79 -10.9 -3.19568 | opp_overlap 1300197 1300196, overlap 1300197 AGACGATCACCAATT TGTCGAG AAG CTCGACA GTTTATTATAAATAG aroB 1299152 - 1300225 + | 3-dehydroquinate synthase TERM 1605 1300447 - 1300488 + T 93 -7.4 -5.54894 | opp_overlap 1300447 1300446 1300487 ATTTCGTCTAAAAAG CCTTAATGAGAAACCTAT AAGGAG ATAGGAAACTCATTAAGG TTTTTTTAGTGAATT TERM 1606 1300588 - 1300620 + T 74 -9.3 -3.10597 | opp_overlap 1300593, overlap 1300593 TCGCTTTGAATACGT AAAAAGAGAAGATGA GCG TCACCTTCTCTTTTG CTTTTCCATAGGCCA TERM 1607 1300593 - 1300615 + T 100 -9.2 -4.68645 | opp_overlap 1300593, overlap 1300588 TTGAATACGTAAAAA GAGAAGATGA GCG TCACCTTCTC TTTTGCTTTTCCATA TERM 1608 1300615 - 1300593 - T 100 -11.4 -4.74706 | opp_overlap 1300593 1300588 TTGAATACGTAAAAA GAGAAGATGA GCG TCACCTTCTC TTTTGCTTTTCCATA SPy_1580 1300965 - 1300660 - | putative acetate kinase SPy_1581 1301305 - 1300967 - | hypothetical protein SPy_1582 1302113 - 1301358 - | SAM-dependent methyltransferase aroE 1303226 - 1302348 - | putative shikimate 5-dehydrogenase SPy_1586 1306870 - 1303364 - | putative beta-galactosidase TERM 1609 1304944 - 1304934 - GR 72 -8.2 -3.41051 | GCATTTTTAGGAGAA GGCC AAA GGCC TACAACACCGCTGTC SPy_1587 1308284 - 1306800 - | putative two-component sensor response regulator SPy_1588 1310008 - 1308284 - | putative two-component sensor histidine kinase TERM 1610 1309173 - 1309162 - G 76 -4.4 -5.03994 | overlap 1309156 GGCCATACACAAAAA CTGT CCTG ACAG CTTCCGCTAATAAAT SPy_1589 1310603 - 1309998 - | hypothetical protein TERM 1611 1310152 - 1310138 - G 71 -5 -4.65747 | overlap 1310140 TAATTCCCAACAAAA CACTCA GCA TGAGTA AAAAGGATTTGAAAC TERM 1612 1310880 - 1310861 - R 83 -7.8 -4.81212 | CTCATCAGAAGAAAA GAGCTGAG ATTT CCCAGCCC TCAACTTATAATCAA SPy_1591 1311241 - 1310909 - | hypothetical protein SPy_1592 1312355 - 1311213 - | hypothetical protein TERM 1613 1312425 - 1312408 - R 71 -5.5 -4.59027 | opp_overlap 1312396 1312409, overlap 1312409 AATGATTAGATAAAA TCTGGTC TTGT GACCAGT TCCTTAAGTCCTATT TERM 1614 1312424 - 1312409 - R 75 -9 -3.34332 | opp_overlap 1312396 1312409, overlap 1312408 ATGATTAGATAAAAT CTGGTC TTGT GACCAG TTCCTTAAGTCCTAT TERM 1615 1312409 - 1312424 + r 75 -9 -3.38584 | opp_overlap 1312408 1312409, overlap 1312396 ATGATTAGATAAAAT CTGGTC TTGT GACCAG TTCCTTAAGTCCTAT SPy_1593 1313362 - 1312436 - | putative sugar-binding transport protein SPy_1595 1314322 - 1313372 - | putative sugar-binding transport protein SPy_1596 1314473 - 1315396 + | putative transcriptional regulator TERM 1616 1315954 - 1315910 - T 78 -7.1 -4.42062 | opp_overlap 1315912, overlap 1315912 CACTTTCCAAAGAAA TACAAGAGCCTCGATCCTCTT AAC ATGAGGAAAAAGGCCCTTGTT TAATCATTGGTAACA TERM 1617 1315952 - 1315912 - T 83 -9.7 -3.81557 | opp_overlap 1315912, overlap 1315910 CTTTCCAAAGAAATA CAAGAGCCTCGATCCTCTT AAC ATGAGGAAAAAGGCCCTTG TTTAATCATTGGTAA SPy_1599 1317449 - 1316007 - | putative beta-glucosidase SPy_1600 1319167 - 1317473 - | putative hyaluronidase TERM 1618 1318581 - 1318595 + g 70 -8.6 -3.38522 | overlap 1318580 AGCCCTTCTTCCTTG GCTACT GCA AGTAGC TCTTTGAAATAAGTC SPy_1602 1320258 - 1319218 - | putative transcription regulator SPy_1603 1320364 - 1321677 + | hypothetical protein SPy_1604 1321692 - 1324397 + | hypothetical protein TERM 1619 1324460 - 1324435 - T 100 -11.9 -4.74453 | opp_overlap 1324428 1324435 TAACATATTCAAAAA GAGTCTGGGAC TATT GTCTCAGACTC TTAAGTTGATTTTGA TERM 1620 1324435 - 1324460 + T 95 -14.1 -3.28783 | opp_overlap 1324435, overlap 1324428 TAACATATTCAAAAA GAGTCTGGGAC TATT GTCTCAGACTC TTAAGTTGATTTTGA SPy_1605 1325853 - 1324498 - | putative two-component responsible histidine kinase TERM 1621 1324866 - 1324876 + g 74 -4 -5.10497 | TCGATACCTCAACCT TAAG CTT CTTA TTTTTTGCCTCAATT TERM 1622 1326245 - 1326256 + r 70 -4.4 -4.64846 | TGGTAATGTAACCTC CTGA CCAC TCAG TTTTCTAATTTATAG SPy_1606 1327873 - 1326518 - | putative RNA methyltransferase TERM 1623 1326817 - 1326839 + g 100 -12.8 -5.65177 | CCTCATAGTAAGCGT TGTCAAAGCC CAT GGCTTTGGCA TTTTTTTGTGCATCT TERM 1624 1327482 - 1327499 + g 79 -5.5 -4.90266 | TGAAACTGCAATTTG GCCCGAT AGTG ATCTGGC TTTTTCATTCCTAAA recX 1327988 - 1328764 + | recombination regulator RecX SPy_1608 1328844 - 1329377 + | hypothetical protein TERM 1625 1329555 - 1329528 - f 93 -11.4 -4.07568 | opp_overlap 1329524 1329522 1329521 TTCGTTGTGGTAAAA GTGGCGTCAA TGTTAATG TTGACGCCAC TTGGCATTTTTGAGC TERM 1626 1329662 - 1329649 - f 76 -3.9 -5.243 | GAAAGTATCAAAAAA TACTA AGTT TAGTA GCGAGGAAATCTCCG TERM 1627 1329888 - 1329878 - g 75 -5.4 -4.68724 | TCATTCAAGACAAAA CGAT ACC ATCG GCCTCAATCATCTTC SPy_1610 1329747 - 1330025 + | hypothetical protein TERM 1628 1330402 - 1330347 - T 100 -16.8 -4.86621 | opp_overlap 1330360, overlap 1330360 ATCTGCAATTAAAAA TAAACAATAAAAAGCTTAAATTTGTT ATAC AACAAATTTAAGCTTTTTATCATTAA AATACAATCAACCAA TERM 1629 1330360 - 1330389 + T 100 -13.9 -4.98255 | opp_overlap 1330347 1330360 AATAAACAATAAAAA GCTTAAATTTGTT ATAC AACAAATTTAAGC TTTTTATCATTAAAA TERM 1630 1330389 - 1330360 - T 100 -13.9 -5.44198 | opp_overlap 1330360, overlap 1330347 AATAAACAATAAAAA GCTTAAATTTGTT ATAC AACAAATTTAAGC TTTTTATCATTAAAA TERM 1631 1333240 - 1333273 + T 71 -8.9 -3.03412 | overlap 1333234 1333239 TCTTAGCACTCGCAG TCTGACTGCCGATGA TATC TCGTTGGCATTCGGA GTTTATCTGAGATTG TERM 1632 1333952 - 1333931 - T 75 -10.1 -2.58544 | opp_overlap 1333932, overlap 1333930 TCGCAGTCCTACAAC CCCGAGGAG TAAA CTCCTCGGT TTGCCCTCCTGCCGT TERM 1633 1333932 - 1333951 + T 100 -13.6 -3.62096 | opp_overlap 1333931 1333930 CGCAGTCCTACAACC CCGAGGAG TAAA CTCCTCGG TTTGCCCTCCTGCCG TERM 1634 1336215 - 1336229 + T 93 -8.6 -4.65032 | AACTTACTCGTTCCT TCTGTC GCT GACAGA TTTATTTCTCGTTTC TERM 1635 1336694 - 1336707 + T 76 -3.9 -5.35815 | GCTATTATTTTTAGT TAGAA AAAA TTCTA TTTTTATTTGGTGTC TERM 1636 1336840 - 1336817 - T 95 -4.6 -6.20267 | opp_overlap 1336817 1336831 GGAAAAAGAAAAAAA CGCGCTTT ATATTCTG AAAACGCG CTTTTTCATATTTTT SPy_1613 1337618 - 1337070 - | hypothetical protein TERM 1637 1337635 - 1337647 + r 81 -9.1 -3.72621 | GGATACCTCTTTCTC GCGCT TGA AGCGC TTACTTTATCTTTAA comFC 1338363 - 1337698 - | putative late competence protein TERM 1638 1337941 - 1337922 - GR 77 -6.4 -4.55887 | TTTCAAAAAGAGAAA GGTAGCTA ACAT TAGCTGCC TCAAGAATAGCGCTC comFA 1339660 - 1338335 - | putative late competence protein required for DNA uptake TERM 1639 1339300 - 1339317 + gH 76 -2 -5.46698 | TTCCTGCACCAGTTA CAGCAT GAACTA ATGTTG TTTTTTGATTTTGCA SPy_1617 1339716 - 1340348 + | hypothetical protein TERM 1640 1340365 - 1340399 + F 71 -5.2 -4.59376 | overlap 1340369 1340371 CATCAACAAAAGTGA TATGGCTTTATTATCA GAG TGATAGTAAATCTGTA TTTTACTTTAATAAT cysM 1340476 - 1341417 + | putative O-acetylserine lyase TERM 1641 1341411 - 1341462 + T 88 -6.9 -5.02074 | gap 1, opp_overlap 1341422 1341424, overlap 1341422 ACCAGTAATTAAGAC GAA-ATAAAAAAGGGTTTGGAACT ACTAA GGTTCCAGACTCTTTTTAGTGTTC TTTTTTAAAAACTGC TERM 1642 1341450 - 1341422 - T 82 -3.1 -5.69793 | opp_overlap 1341411 1341422, overlap 1341424 AGACGAAATAAAAAA GGGTTTGGAAC TACTAAG GTTCCAGACTC TTTTTAGTGTTCTTT TERM 1643 1341422 - 1341450 + T 90 -8.2 -4.94672 | opp_overlap 1341422 1341424, overlap 1341411 AGACGAAATAAAAAA GGGTTTGGAACT ACTAA GGTTCCAGACTC TTTTTAGTGTTCTTT SPy_1619 1341812 - 1341435 - | hypothetical protein SPy_1621 1343890 - 1343249 - | putative two-component response regulator TERM 1644 1343757 - 1343737 - G 71 -4.8 -4.50058 | gap 1, overlap 1343731 1343740 GATCCATAACCAAAA CATCTGGCT TCAA AGCCA-ATG CCAAATCAACCCCTT SPy_1622 1344887 - 1343883 - | putative two-component sensor histidine kinase SPy_1623 1345627 - 1344941 - | hypothetical protein TERM 1645 1345652 - 1345694 + r 71 -6.5 -4.21351 | opp_overlap 1345652, overlap 1345655 ACGAGTAGTTAAAAA GAATAGTTAGTGGCATG CCAGTAAAA CATGAGACTAACTATTC TTTGTTAAGGTGTTT TERM 1646 1345694 - 1345652 - R 83 -7.9 -4.68994 | opp_overlap 1345652 1345655 ACGAGTAGTTAAAAA GAATAGTTAGTGGCATGCC AGTAA AACATGAGACTAACTATTC TTTGTTAAGGTGTTT SPy_1625 1347597 - 1345699 - | putative protein kinase pppL 1348334 - 1347594 - | putative phosphoprotein phosphatase TERM 1647 1348128 - 1348150 + g 71 -4.8 -4.63542 | overlap 1348130 TAACCAATCTCTAAT CTGACTTAAC TCT GTGAAGTCTG TTTTTACCCATTCTC TERM 1648 1348344 - 1348356 + r 73 -7.7 -3.79251 | CTTCATACGTTTTTT CTGAC TCA GTCAG TTTCCTCCTAAAATA sunL 1349694 - 1348372 - | 16S rRNA m(5)C 967 methyltransferase TERM 1649 1348766 - 1348776 + g 70 -3.2 -4.84914 | TGACGATGAACCTCT CTGG CAT CTAG TTTTCTTGTCTCAAT fmt 1350619 - 1349684 - | methionyl-tRNA formyltransferase priA 1353065 - 1350681 - | primosome assembly protein PriA TERM 1650 1353112 - 1353134 + r 87 -6.4 -5.4111 | opp_overlap 1353112 CTAAATATGAAAAAA TCTAAGATTT CTG AAACCTTAGA TTTTTTCTCCTTCTT TERM 1651 1353134 - 1353112 - R 95 -8.6 -5.32699 | opp_overlap 1353112 CTAAATATGAAAAAA TCTAAGATTT CTG AAACCTTAGA TTTTTTCTCCTTCTT SPy_1630 1353444 - 1353130 - | DNA-directed RNA polymerase subunit omega gmk 1354098 - 1353463 - | guanylate kinase TERM 1652 1353761 - 1353738 - G 93 -6.8 -5.40072 | overlap 1353744 GTGGTGTTAAAAAAA CAAAAACACC ATCT GGTACTTTTG ACTTAACCTGAAGAG TERM 1653 1353755 - 1353744 - G 84 -2.2 -5.86609 | overlap 1353738 TTAAAAAAACAAAAA CACC ATCT GGTA CTTTTGACTTAACCT TERM 1654 1354208 - 1354183 - R 100 -13.5 -3.98484 | opp_overlap 1354183 1354189, overlap 1354189 AAGGCAAGTCATAAA GAAAAAGAGGA TAAT TCCTCTTTTTC TACTTGGCATAATCA TERM 1655 1354183 - 1354208 + r 89 -13.5 -2.74012 | opp_overlap 1354183 1354189, overlap 1354189 AAGGCAAGTCATAAA GAAAAAGAGGA TAAT TCCTCTTTTTC TACTTGGCATAATCA TERM 1656 1354202 - 1354189 - R 85 -6.7 -5.38958 | opp_overlap 1354183 1354189, overlap 1354183 AGTCATAAAGAAAAA GAGGA TAAT TCCTC TTTTTCTACTTGGCA TERM 1657 1354189 - 1354202 + r 83 -6.7 -4.98255 | opp_overlap 1354189 1354183, overlap 1354183 AGTCATAAAGAAAAA GAGGA TAAT TCCTC TTTTTCTACTTGGCA SPy_1633 1355815 - 1354208 - | hypothetical protein TERM 1658 1355325 - 1355347 + g 78 -2.8 -5.36965 | gap 1 TCTGCAATCGTCATC GCAGCAACT TTTTCC AGTT-CTGC TTTTTTCTCCTCTTC TERM 1659 1355971 - 1355958 - R 74 -2.4 -5.47218 | CCCTACTTAAAAAAA GACT GTAGCA AGTC GTCCATGATGTAGGC SPy_1634 1356841 - 1355945 - | LysR family transcriptional regulator TERM 1660 1356957 - 1356942 - H 77 -3.4 -5.52986 | opp_overlap 1356954 ACTCTATCAAAAAAA TTTATA TGCT TATAAA AATTCTATATTTTTA atoB 1357043 - 1358230 + | putative acetyl-CoA:acetyltransferase TERM 1661 1358571 - 1358582 + G 73 -7.2 -4.13767 | ATTAGCTGAGCGCAT CCGC AGTG GCGG TTTTGGGCTAGGCGG atoD.1 1358254 - 1358904 + | putative Acetyl-CoA:acetoacetyl-CoA transferase A subunit atoA 1358906 - 1359565 + | putative Acetyl-CoA:acetoacetyl-CoA transferase b subunit TERM 1662 1359870 - 1359896 + G 73 -7.5 -4.11216 | gap 1 GGTTAACAACGCAGG TCTTCAA-CATG TTGC CATGATTGAAGA TTTTCCAACTGAAAA TERM 1663 1360219 - 1360202 - g 75 -7.7 -4.09511 | overlap 1360205 AAGACCTTTCCAAAA CAAGAGG TATT CCCCTTG AAAATGTTCTTGAAG SPy_1640 1359598 - 1360377 + | 3-hydroxybutyrate dehydrogenase SPy_1641 1360448 - 1361779 + | hypothetical protein luxS 1361853 - 1362335 + | S-ribosylhomocysteinase TERM 1664 1362442 - 1362465 + T 100 -8.2 -5.81622 | opp_overlap 1362442 TTATTAATCAAAAAA CTGAGACAAG TTGC CTTATCTCAG TTTTTTTGATTTTCT TERM 1665 1362465 - 1362442 - T 100 -10.4 -5.30155 | opp_overlap 1362442 TTATTAATCAAAAAA CTGAGACAAG TTGC CTTATCTCAG TTTTTTTGATTTTCT SPy_1643 1363949 - 1362480 - | hypothetical protein SPy_1644 1365117 - 1363963 - | hypothetical protein TERM 1666 1364588 - 1364598 + g 79 -6.8 -4.57073 | ATATTTTCCTTGATC GGTG CTC CACC TTTTTGAACGCGATA TERM 1667 1365161 - 1365146 - R 95 -9 -5.04868 | TTAAATCAAATAAAA GCTAGC AAAT GCTAGC TTAACCTATTATGCA SPy_1646 1365888 - 1365562 - | hypothetical protein SPy_1647 1366525 - 1366010 - | hypothetical protein TERM 1668 1366146 - 1366132 - G 75 -2.8 -5.24129 | opp_overlap 1366132 CTGTGTCATAAAAAA CATAAG CCC CTTCTG TCTTTTCTAATAAAA TERM 1669 1366852 - 1366820 - g 82 -7.8 -4.57569 | GCAGTCGGGCAAAAA TCGTTGAAGCGTAC TTTAG ACAAGCTTCAACGA CTGACTATTGCGGCG recU 1366606 - 1367205 + | Holliday junction-specific endonuclease pbp1A 1367192 - 1369357 + | putative penicillin-binding protein 1a TERM 1670 1369489 - 1369440 - T 85 -10.3 -3.42354 | gap 1, opp_overlap 1369452, overlap 1369452 TACCTTAAGTGATAA TCTAAATAAAAAGCGAGTCCAC GTTCTGT GAGGACTCGCTTTTTATAT-GA CACAAATGACTTACC TERM 1671 1369452 - 1369478 + T 100 -10.8 -4.96848 | opp_overlap 1369452 1369440 TAATCTAAATAAAAA GCGAGTCCACGT TCT GTGAGGACTCGC TTTTTATATGACACA TERM 1672 1369478 - 1369452 - T 100 -9.4 -5.33026 | opp_overlap 1369452, overlap 1369440 TAATCTAAATAAAAA GCGAGTCCAC GTTCTGT GAGGACTCGC TTTTTATATGACACA TERM 1673 1369552 - 1369532 - T 89 -8.5 -4.29034 | AAACAAAAAACAGAA TTCTTTAAT CGT ATTAAAGAA AAGGTACAACGTTAA TERM 1674 1369674 - 1369698 + T 70 -2.1 -5.24989 | opp_overlap 1369674 TATACATGAAAAAAA CACGTTTCC ATATACC GAAGACGTG TTTTTTCATATGTCA TERM 1675 1369698 - 1369674 - T 80 -2.8 -5.60864 | opp_overlap 1369674 TATACATGAAAAAAA CACGTTTCCA TATAC CGAAGACGTG TTTTTTCATATGTCA pepC 1371161 - 1369824 - | putative cysteine aminopeptidase C TERM 1676 1371283 - 1371314 + r 93 -8.2 -5.57888 | opp_overlap 1371291, overlap 1371291 ATTTGATTTTCTTCA AGAAAAAAGTTAGG ATAA CCTAACTTTTTTTG TTTTCTTTTTTTACT TERM 1677 1371291 - 1371306 + r 100 -7.6 -6.17669 | opp_overlap 1371291, overlap 1371283 TTCTTCAAGAAAAAA GTTAGG ATAA CCTAAC TTTTTTTGTTTTCTT TERM 1678 1371306 - 1371291 - R 93 -7.6 -5.4505 | opp_overlap 1371291 1371283 TTCTTCAAGAAAAAA GTTAGG ATAA CCTAAC TTTTTTTGTTTTCTT nadE 1372170 - 1371346 - | NAD synthetase TERM 1679 1371570 - 1371560 - G 71 -6.8 -4.03413 | ACTTTTTCATACAAA GCAG CAT CTGC TCCTAAAACTTTCAA SPy_1653 1373626 - 1372172 - | nicotinate phosphoribosyltransferase TERM 1680 1372664 - 1372684 + g 76 -9.1 -3.72576 | AGCACCTAAGGCAGG CTGATCATA GGC TGTGATCAG TTTGGTCCCAACACC aapA 1375176 - 1373797 - | putative amino acid permease SPy_1656 1376550 - 1376326 - | hypothetical protein TERM 1681 1376639 - 1376597 - R 70 -3.7 -5.00884 | gap 1, overlap 1376610 AGTTTTTCTAAAAAA CATAACAAGAAAAGCCCAGG GATA CCTAGACCTTT-TTATTATA ACAAAAGAATAACAT TERM 1682 1376627 - 1376610 - R 77 -5.5 -4.99312 | overlap 1376597 AACATAACAAGAAAA GCCCAGG GATA CCTAGAC CTTTTTATTATAACA SPy_1657 1377397 - 1376654 - | amino acid ABC transporter ATP-binding protein SPy_1658 1378200 - 1377397 - | putative amino acid ABC transproter (permease protein) SPy_1659 1379738 - 1378395 - | ATP-dependent RNA helicase TERM 1683 1379216 - 1379195 - G 75 -10.3 -3.21593 | overlap 1379193 TAGTTGCTGAGAACA CCAAAATCT GAAC AGATTTTGG AAGCGAAGCTGCAAT mraY 1380906 - 1379896 - | phospho-N-acetylmuramoyl-pentapeptide-transferase pbpX 1383163 - 1380908 - | putative penicillin binding protein 2X TERM 1684 1382064 - 1382082 + g 73 -7.4 -4.10672 | opp_overlap 1382064 TCTGCAATTGTCAAA CCATTAGC ATT GCTAAAGG TTTCGTTTGGGTTGA ftsL 1383490 - 1383167 - | putative cell division protein TERM 1685 1383412 - 1383432 + g 75 -2.5 -5.30199 | opp_overlap 1383412, overlap 1383414 TAGCAGTATAAAAAG CCTTCTCAA TTC TAGAGAAAG TTTTTATTCGTTTTT mraW 1384508 - 1383495 - | S-adenosyl-methyltransferase MraW TERM 1686 1384353 - 1384330 - G 82 -8.8 -4.27512 | overlap 1384327 TTGGACAACAAATAA GCTGAGTGGC CTGA GCCACCTAGC GTCGCATCAACATAA TERM 1687 1384869 - 1384851 - R 87 -2.4 -6.07627 | ATCTCCAAAAAAAAA CAAAATAG CCC CAATTTCG GACAATTTTCAATTC proA 1386232 - 1384982 - | gamma-glutamyl phosphate reductase proB 1387046 - 1386225 - | gamma-glutamyl kinase TERM 1688 1387084 - 1387069 - R 85 -6.8 -5.34555 | opp_overlap 1387069 TTATAGCATAAAAAA CAGCCC CAGA GGACTG TTTTTCCGAATAATG SPy_1673 1388739 - 1387111 - | ABC transporter permease TERM 1689 1388575 - 1388565 - G 76 -3.2 -5.28414 | CAATAAACATAAAAA GGTA AAT CACC AAAAACATGGCAATC SPy_1674 1389478 - 1388744 - | ABC transporter ATP-binding protein SPy_1675 1389778 - 1389512 - | hypothetical protein TERM 1690 1389955 - 1389930 - R 100 -13.5 -5.44119 | opp_overlap 1389930 TTTATTTTAAAAAAA CAGAGTAAATC AAAT GATTTACTCTG TTTGGGATGTTTAAC TERM 1691 1389930 - 1389955 + r 100 -13.5 -3.695 | opp_overlap 1389930 TTTATTTTAAAAAAA CAGAGTAAATC AAAT GATTTACTCTG TTTGGGATGTTTAAC tkt 1391956 - 1389971 - | transketolase TERM 1692 1392166 - 1392138 - R 72 -8.1 -3.44124 | opp_overlap 1392138 1392155, overlap 1392136 ACGATGAATATAAGA GAGCCTGTTGACA CAG TGGCCACAGACTC TTTAGCCTTATTTTT SPy_1678 1392818 - 1392174 - | putative translaldolase TERM 1693 1392722 - 1392706 - G 71 -6.6 -4.10007 | ATAACTGTTTCAAAA TCACGT CCTTC ACGTGA GATAATGGTTGGATT SPy_1680 1394443 - 1392944 - | trans-acting positive regulator TERM 1694 1393051 - 1393041 - G 70 -5.4 -4.37092 | AGGTCTTTGAGAAAA GCTT CTA AAGC AGTGAGTTCATAGGG SPy_1681 1395779 - 1394433 - | NADH peroxidase TERM 1695 1395058 - 1395044 - G 70 -8.6 -3.27525 | overlap 1395056 TTGGCCTAAAGTTAA TGGCTA AAA TAGCCA AATCACCTTGGAAGG TERM 1696 1395875 - 1395850 - R 73 -6.9 -4.02396 | gap 1, opp_overlap 1395850, overlap 1395846 TAAAGAAAATGCAAA GGAGCTGGCCTA TGA TA-GCCAACCCC TTTAGTGATGGTTAG glpF 1396588 - 1395887 - | putative glycerol uptake facilitator glpO 1398428 - 1396590 - | putative alpha-glycerophosphate oxidase TERM 1697 1396643 - 1396655 + g 73 -7.7 -3.80174 | overlap 1396646 TGTCTGCAATCACGC GACGA AGA TCGTC TTCTTGTGCCACTCT glpK 1399970 - 1398444 - | glycerol kinase TERM 1698 1400220 - 1400179 - R 100 -13.2 -4.81644 | opp_overlap 1400189 CAAAGAAAATCAAAA GACCCAACAATCACTCTG CTAATC CAGAGTCATCATTGGGTC ATAAAGAGAACTAAG SPy_1686 1400782 - 1400330 - | hypothetical protein TERM 1699 1400818 - 1400848 + r 86 -10.6 -3.6943 | opp_overlap 1400820 1400826, overlap 1400820 1400826 ACAGTCATCACGATA AACAAAAAGCAGTT CAG AGCTGCTTTTTGTC TTATGATTTTGGGTC TERM 1700 1400820 - 1400846 + r 93 -13.2 -3.41757 | opp_overlap 1400820 1400826, overlap 1400818 1400826 AGTCATCACGATAAA CAAAAAGCAGTT CAG AGCTGCTTTTTG TCTTATGATTTTGGG TERM 1701 1400846 - 1400820 - R 93 -11 -3.99592 | opp_overlap 1400820 1400818 1400826, overlap 1400826 AGTCATCACGATAAA CAAAAAGCAGTT CAG AGCTGCTTTTTG TCTTATGATTTTGGG TERM 1702 1400826 - 1400840 + r 84 -6.4 -5.16133 | opp_overlap 1400820 1400826, overlap 1400820 1400818 CACGATAAACAAAAA GCAGTT CAG AGCTGC TTTTTGTCTTATGAT TERM 1703 1400840 - 1400826 - R 82 -4.2 -5.40464 | opp_overlap 1400826 1400820 1400818, overlap 1400820 CACGATAAACAAAAA GCAGTT CAG AGCTGC TTTTTGTCTTATGAT SPy_1687 1401106 - 1400849 - | hypothetical protein glyS 1403299 - 1401260 - | glycyl-tRNA synthetase subunit beta TERM 1704 1402016 - 1402034 + g 72 -9.6 -3.02511 | GTAGTGTTCACGGAT TGCTGTTG CCA CAGCAGCA TCTTCACCAGCTAGA TERM 1705 1403493 - 1403467 - R 82 -9.6 -3.6502 | opp_overlap 1403473, overlap 1403468 1403473 TAGGGGGGACGCAAA GTGAAATTATCC AGT GGATAATTTCAG AAAACAAAAGTGTTC TERM 1706 1403492 - 1403468 - R 87 -13.1 -2.78798 | opp_overlap 1403473, overlap 1403467 1403473 AGGGGGGACGCAAAG TGAAATTATCC AGT GGATAATTTCA GAAAACAAAAGTGTT TERM 1707 1403487 - 1403473 - R 70 -7.2 -3.85909 | opp_overlap 1403473, overlap 1403468 1403467 GGACGCAAAGTGAAA TTATCC AGT GGATAA TTTCAGAAAACAAAA TERM 1708 1403599 - 1403621 + r 73 -7.6 -3.74762 | overlap 1403600 CGGGAGTAACCTTGA CTCGGCGACC TTC GGTCGCCCAC TTCTTGCTCGCTCTT TERM 1709 1403600 - 1403620 + r 81 -11.1 -2.84134 | overlap 1403599 GGGAGTAACCTTGAC TCGGCGACC TTC GGTCGCCCA CTTCTTGCTCGCTCT glyQ 1404594 - 1403677 - | glycyl-tRNA synthetase subunit alpha TERM 1710 1404758 - 1404709 - R 100 -17.3 -5.1675 | CTAGGCACCAAAAAA CCGCATTTTGATGCTCCTAAATC ATAA GACCTAGGGGCGTCAAAACGCGG TTCCACCCTAATTTA SPy_1691 1405520 - 1404966 - | hypothetical protein TERM 1711 1405411 - 1405421 + g 72 -3.2 -5.10877 | overlap 1405400 TCCTGTCCTCCTTGG GCTA ATA TGGC TTTTTCATTTGTTAT TERM 1712 1405619 - 1405596 - R 83 -6.8 -5.00884 | opp_overlap 1405596 ACCGTTTTCAAAAAA GATTTAGCGA ATTA TGGCTAAATC TTTGTAGTTCCTTAA TERM 1713 1405596 - 1405619 + r 71 -6.8 -4.10331 | opp_overlap 1405596 ACCGTTTTCAAAAAA GATTTAGCGA ATTA TGGCTAAATC TTTGTAGTTCCTTAA SPy_1693 1406470 - 1405631 - | putative reductase / dehydrogenase TERM 1714 1406587 - 1406540 - R 70 -2 -5.22481 | CATAAAGAAAGAAAA TACAAAAAGAATTGGCCTGCCA GACA TAGCTACCCCAATCCTTTTGTA TCTCTTAGGCATCAA nagA 1407740 - 1406592 - | N-acetylglucosamine-6-phosphate deacetylase TERM 1715 1407821 - 1407852 + r 100 -9.6 -5.42259 | opp_overlap 1407823 1407828, overlap 1407823 TTTTGGGATTCAAAA AAGAAAACGTGGAT GATC ATTCACGTTTTCTC TTTTTTTAAAGCTGG TERM 1716 1407823 - 1407850 + r 100 -12.2 -4.35085 | opp_overlap 1407823 1407828, overlap 1407821 TTGGGATTCAAAAAA GAAAACGTGGAT GATC ATTCACGTTTTC TCTTTTTTTAAAGCT TERM 1717 1407850 - 1407823 - R 100 -10 -5.08824 | opp_overlap 1407821 1407823, overlap 1407828 TTGGGATTCAAAAAA GAAAACGTGGAT GATC ATTCACGTTTTC TCTTTTTTTAAAGCT TERM 1718 1407845 - 1407828 - R 82 -4.1 -5.43553 | opp_overlap 1407823 1407821, overlap 1407823 ATTCAAAAAAGAAAA CGTGGAT GATC ATTCACG TTTTCTCTTTTTTTA SPy_1695 1409489 - 1407858 - | hypothetical protein TERM 1719 1409449 - 1409436 - G 72 -4.5 -4.70515 | GATACTGAAAAGAAA GAGAC CTAA GCCTC CAAAGAAATGAAATG SPy_1697 1409691 - 1410413 + | hypothetical protein SPy_1698 1411384 - 1410542 - | hypothetical protein TERM 1720 1410744 - 1410754 + g 100 -6.8 -5.75342 | opp_overlap 1410743 ATTTCTTCTATCAAG GCAG AAA CTGC TTTTTTTTGACCACG TERM 1721 1412016 - 1412004 - g 88 -7.7 -5.16572 | ACTGAAGCTAAAAAA GAAGC TCA GCTTC TTAAAATGATTTTCA SPy_1699 1411677 - 1412234 + | putative transcription regulator TERM 1722 1412219 - 1412275 + T 100 -12 -4.62069 | gap 2, opp_overlap 1412230 1412238, overlap 1412221 1412226 1412238 GGCTGCTATGGGCTT GCCT--CTATTAACGTAAAAAGGTTCCT TTT GGGAACCTTTTTACGTTAATTGTTAGTC TTTTTGAGCTACAAG TERM 1723 1412221 - 1412273 + T 100 -13.2 -3.92746 | gap 2, opp_overlap 1412230 1412238, overlap 1412219 1412226 1412238 CTGCTATGGGCTTGC CT--CTATTAACGTAAAAAGGTTCCT TTT GGGAACCTTTTTACGTTAATTGTTAG TCTTTTTGAGCTACA TERM 1724 1412226 - 1412266 + T 100 -22.3 -3.91821 | opp_overlap 1412230 1412238, overlap 1412221 1412219 1412238 ATGGGCTTGCCTCTA TTAACGTAAAAAGGTTCCT TTT GGGAACCTTTTTACGTTAA TTGTTAGTCTTTTTG TERM 1725 1412262 - 1412230 - T 100 -18 -3.14132 | opp_overlap 1412226 1412221 1412219 1412238, overlap 1412238 GCTTGCCTCTATTAA CGTAAAAAGGTTCC TTTTG GGAACCTTTTTACG TTAATTGTTAGTCTT TERM 1726 1412254 - 1412238 - T 86 -8 -4.7629 | opp_overlap 1412226 1412221 1412219 1412238, overlap 1412230 CTATTAACGTAAAAA GGTTCC TTTTG GGAACC TTTTTACGTTAATTG TERM 1727 1412238 - 1412254 + T 93 -8.7 -4.77896 | opp_overlap 1412238 1412230, overlap 1412226 1412221 1412219 CTATTAACGTAAAAA GGTTCCT TTT GGGAACC TTTTTACGTTAATTG SPy_1700 1413094 - 1412270 - | hypothetical protein SPy_1701 1413701 - 1413096 - | hypothetical protein TERM 1728 1413833 - 1413805 - R 100 -11.2 -5.37345 | opp_overlap 1413809 TGTAAGGATAAAAAA GCAAGGATAAAA CCCAT TTTCATCCTTGC TACAAAAGATTCAAA lacD.1 1414887 - 1413910 - | tagatose 1,6-diphosphate aldolase lacB.1 1415912 - 1415397 - | galactose-6-phosphate isomerase subunit LacB TERM 1729 1415612 - 1415598 - G 77 -8.6 -3.79251 | opp_overlap 1415597 GATTTTACCACCAAA GCCAAT CAC ATTGGC ATTCAATTCTTCCTT lacA.1 1416352 - 1415927 - | galactose-6-phosphate isomerase subunit LacA TERM 1730 1416503 - 1416471 - R 77 -10 -3.02144 | gap 1, opp_overlap 1416469, overlap 1416475 TTATTTCTTTCAAGA CAAAGCACT-TGTGG GTTC CCACAGAGCGCCTTG CCTTACATGAGAAAT TERM 1731 1416499 - 1416475 - R 75 -7.2 -4.1891 | gap 1, opp_overlap 1416469, overlap 1416471 TTCTTTCAAGACAAA GCACT-TGTGG GTTC CCACAGAGCGC CTTGCCTTACATGAG TERM 1732 1416531 - 1416564 + r 100 -19.9 -5.1675 | opp_overlap 1416542 AATACTCTTTTCACG TTAGGGAGTAAGGTA GAAA TACCTTACTCCCTAA TTTTTTAGTCAGTCA SPy_1709 1418040 - 1416592 - | PTS system, galactose-specific IIC component SPy_1710 1418374 - 1418069 - | PTS system, galactose-specific IIB component SPy_1711 1418840 - 1418367 - | PTS system, galactose-specific IIA component TERM 1733 1418637 - 1418665 + g 73 -10.4 -2.88427 | CAAGCAATACTTGGT TTCTGTATGCGG AATAG CCGCATACAAAA TATCTGACCCATCTT TERM 1734 1419694 - 1419683 - g 72 -4.4 -4.67011 | overlap 1419686 AATTCTATTGAAAAA TACC TCTT GGTA GATAACCAAAAATTC lacR.1 1419077 - 1419847 + | putative lactose phosphotransferase system repressor protein copZ 1420254 - 1420051 - | putative copper chaperone - copper transport operon copA 1422469 - 1420268 - | putative cation-transporting ATP-ase - copper transport operon TERM 1735 1422242 - 1422264 + g 77 -8.4 -3.80569 | overlap 1422228 1422244 AGACCAAATAACCTT TAGGTCTTCG TCA CGACGACCTG TTTGCATGTGTTTTG TERM 1736 1422244 - 1422262 + g 72 -8.8 -3.46904 | overlap 1422228 1422242 ACCAAATAACCTTTA GGTCTTCG TCA CGACGACC TGTTTGCATGTGTTT TERM 1737 1422415 - 1422432 + g 78 -4.1 -5.2166 | opp_overlap 1422402 CAGCCTGTTCTACTT CAGGCAA TTGA TTGACTG TTTTTTCAATTGTTA copY 1422933 - 1422499 - | putative negative transcriptional regulator - cpooer transport operon SPy_1718 1423105 - 1424091 + | putative esterase TERM 1738 1424115 - 1424131 + T 100 -8 -6.04378 | ATAACTCCTACCTGC CACCAG TTAAT CTGGTG TTTTTTTTGTAGTTT TERM 1739 1424171 - 1424195 + T 100 -11.5 -4.08974 | opp_overlap 1424171 AATAACAATTAAAAA GAGCCCTATCA TAA TGATAAGGCTC TTTCTGTCATAACAT TERM 1740 1424195 - 1424171 - T 100 -13.7 -5.03201 | opp_overlap 1424171 AATAACAATTAAAAA GAGCCCTATCA TAA TGATAAGGCTC TTTCTGTCATAACAT rbfA 1424581 - 1424225 - | ribosome-binding factor A TERM 1741 1424487 - 1424503 + g 73 -2.1 -5.24531 | overlap 1424488 1424489 ATCGTTACTCCCTGA ACGCGTG GAT CACGCAC TTTTTTCTGAAGAAT TERM 1742 1424630 - 1424602 - R 100 -12.5 -4.16943 | opp_overlap 1424607, overlap 1424607 TTCCACATTTTAAAA CAAAAGCTAGGCT GAA AGCCCAGCTTATG ACATTGCTACCTGTT TERM 1743 1424625 - 1424607 - R 100 -11 -5.09259 | opp_overlap 1424607, overlap 1424602 CATTTTAAAACAAAA GCTAGGCT GAA AGCCCAGC TTATGACATTGCTAC TERM 1744 1424607 - 1424625 + r 75 -8.8 -3.37464 | opp_overlap 1424607 1424602 CATTTTAAAACAAAA GCTAGGCT GAA AGCCCAGC TTATGACATTGCTAC infB 1427641 - 1424780 - | translation initiation factor IF-2 TERM 1745 1425489 - 1425502 + g 84 -8.1 -4.72986 | GATCGCTCCTCACCA GCTGC ACGC GCAGC TTTTTCATCAGCGTA SPy_1722 1427963 - 1427661 - | hypothetical protein SPy_1723 1428252 - 1427956 - | hypothetical protein nusA 1429425 - 1428268 - | transcription elongation factor NusA SPy_1725 1429983 - 1429600 - | hypothetical protein TERM 1746 1430169 - 1430148 - R 93 -8.7 -4.68724 | opp_overlap 1430138 1430148 CCACTTAATACAAAA GTGGCGAGA CATA TCCCACCAC CTTTCTGTATTATTT trmB 1431030 - 1430395 - | tRNA (guanine-N(7))-methyltransferase TERM 1747 1430563 - 1430573 + g 73 -6.8 -4.15854 | GTACTCAAACAAGCC CCGA TTA TCGG TTTTAAAATGAATTT SPy_1727 1431821 - 1431030 - | hypothetical protein SPy_1728 1432919 - 1431885 - | putative ABC transporter (permease) SPy_1729 1433647 - 1432922 - | putative ABC transporter ATP-binding protein TERM 1748 1433872 - 1433901 + G 100 -14.5 -3.8505 | gap 1, opp_overlap 1433874 1433876 GTTCGTAACTTACTA GAGATGACT-GCTG AGA CAGCTAGTCATCTC TTTGCTCGTATTCCT TERM 1749 1433899 - 1433874 - g 80 -11.3 -2.82933 | gap 1, opp_overlap 1433872, overlap 1433876 TCGTAACTTACTAGA GATGACT-GCTG AGA CAGCTAGTCATC TCTTTGCTCGTATTC hit 1433719 - 1434138 + | putative cell-cycle regulation histidine triad (HIT) protein SPy_1731 1434135 - 1434491 + | hypothetical protein TERM 1750 1434552 - 1434527 - T 74 -9.1 -3.01497 | opp_overlap 1434527, overlap 1434529 1434531 TTATTTGAAATCACA GACAGCTATCA TCTT TGATACCTGTC TTTTTTATATTCAAA TERM 1751 1434527 - 1434552 + T 100 -9.1 -5.47159 | opp_overlap 1434527 1434529 1434531 TTATTTGAAATCACA GACAGCTATCA TCTT TGATACCTGTC TTTTTTATATTCAAA TERM 1752 1434614 - 1434591 - T 100 -11 -5.19879 | opp_overlap 1434591 TTTTAAACATAAAAA CCCTCAGAAC GTTA GGTCTGAGGG TTGATATTAGCAGGA TERM 1753 1434591 - 1434614 + T 87 -11 -3.36273 | opp_overlap 1434591 TTTTAAACATAAAAA CCCTCAGAAC GTTA GGTCTGAGGG TTGATATTAGCAGGA SPy_1733 1435876 - 1434602 - | putative transcription regulator SPy_1734 1436409 - 1435885 - | hypothetical protein SPy_1735 1436845 - 1436384 - | ATP/GTP hydrolase TERM 1754 1436897 - 1436870 - R 91 -2.8 -6.00086 | gap 1, overlap 1436874 ATATCAGAAAAAAAA CATACTTCCAAGC ACT ACCTAGAAG-ATG ACTCCAATAAGGTAT TERM 1755 1436966 - 1436927 - R 70 -3.9 -4.98531 | gap 1 TTCGTAAAGTAAAAA CGCTTCTTTATATTAA AGGTTAAAA TCAAT-TAAAGAAGCG GCAGTTAGTAGCAAA SPy_1736 1438459 - 1436999 - | hypothetical protein SPy_1737 1438723 - 1439535 + | hypothetical protein TERM 1756 1439548 - 1439571 + F 82 -9 -4.06864 | opp_overlap 1439548 TAGTAGCAAACGAAA CCACTATTTT TCAG AAAATGGTGG TTCTTCTTCTGTCAA TERM 1757 1439571 - 1439548 - f 71 -6.8 -4.11623 | opp_overlap 1439548 TAGTAGCAAACGAAA CCACTATTTT TCAG AAAATGGTGG TTCTTCTTCTGTCAA manL 1439887 - 1440879 + | mannose-specific phosphotransferase system component IIAB manM 1440968 - 1441777 + | PTS system, mannose-specific IIC component TERM 1758 1442169 - 1442179 + G 71 -6.8 -4.0098 | CGTCCTATCCTTGGG GCAC TTG GTGC TTCTTTGGCTTCAAC manN 1441794 - 1442705 + | PTS system, mannose-specific IID component TERM 1759 1442716 - 1442740 + F 100 -10.8 -5.43621 | opp_overlap 1442715 1442719 TGTAATCAACCAATG GAAGTCTGAG ATGAA CTCAGGCTTC TTTTTTATGCTTTAT SPy_1741 1442819 - 1443178 + | hypothetical protein serS 1443570 - 1444847 + | seryl-tRNA synthetase TERM 1760 1444889 - 1444852 - T 71 -5.6 -4.58585 | opp_overlap 1444856, overlap 1444856 CACCTAAATAATAAA TTCACCCCAGAGATCA TTAAAG TGATTTCTGGGGTTTA CTATTTTAAAGAGCC TERM 1761 1444856 - 1444885 + T 100 -13.7 -4.07678 | opp_overlap 1444852 1444856 TAAATAATAAATTCA CCCCAGAGATCAT TAAA GTGATTTCTGGGG TTTACTATTTTAAAG TERM 1762 1444885 - 1444856 - T 81 -10.8 -2.82317 | opp_overlap 1444856, overlap 1444852 TAAATAATAAATTCA CCCCAGAGATCA TTAAAG TGATTTCTGGGG TTTACTATTTTAAAG accA 1445839 - 1445069 - | acetyl-CoA carboxylase subunit alpha TERM 1763 1445738 - 1445727 - G 73 -5.8 -4.63527 | CCATCATCTGAAAAA TGGC GATC GCCA TGCAGTTCCATAAAG accD 1446702 - 1445836 - | acetyl-CoA carboxylase subunit beta accC 1448075 - 1446711 - | acetyl-CoA carboxylase biotin carboxylase subunit fabZ 1448526 - 1448107 - | (3R)-hydroxymyristoyl-ACP dehydratase TERM 1764 1448223 - 1448247 + g 70 -2.8 -5.09426 | AGGTTGCTGTCATCA CAAGTTGATC ACCAG GGACGACTTG TTTTTTGAACTTCAC accB 1449026 - 1448526 - | acetyl-CoA carboxylase biotin carboxyl carrier protein subunit TERM 1765 1448852 - 1448888 + g 95 -13.1 -3.59402 | opp_overlap 1448858, overlap 1448855 AAGCAGTTGGATTCG GAACAAGTTGTACCTGT GGT ACAGGCACAGCATGTTC TTGATTTGATGTCGA TERM 1766 1448855 - 1448885 + g 79 -9 -3.92143 | opp_overlap 1448858, overlap 1448852 CAGTTGGATTCGGAA CAAGTTGTACCTGT GGT ACAGGCACAGCATG TTCTTGATTTGATGT TERM 1767 1448882 - 1448858 - G 76 -9.3 -3.63515 | opp_overlap 1448855 1448852 TTGGATTCGGAACAA GTTGTACCTGT GGT ACAGGCACAGC ATGTTCTTGATTTGA fabF 1450260 - 1449028 - | 3-oxoacyl-(acyl carrier protein) synthase II fabG 1451009 - 1450275 - | 3-ketoacyl-(acyl-carrier-protein) reductase fabD 1451937 - 1450999 - | acyl-carrier-protein S-malonyltransferase fabK 1452933 - 1451962 - | putative trans-2-enoyl-ACP reductase II acpP 1453359 - 1453135 - | acyl carrier protein TERM 1768 1453412 - 1453400 - R 73 -7.7 -3.85817 | ATTTGTTTTTATAAA TGTGC TAG GCACA TGAATAACTAGATTC fabH 1454394 - 1453420 - | 3-oxoacyl-(acyl carrier protein) synthase III TERM 1769 1454227 - 1454174 - G 77 -5 -5.00467 | gap 3, overlap 1454178 1454180 1454183 1454211 GCAACAATAATAAAA TCAA-TAGC--ATCAGCTTTTAACCCA GAC TGAGTTAAAAGCTGATCAGCAACCTGA ATAGCTAGGTCACTA TERM 1770 1454218 - 1454178 - G 83 -9.4 -3.87952 | gap 2, overlap 1454174 1454180 1454183 1454211 CAATAATAAAATCAA TAGCATCAGCTTTTAACCCA GAC TGAGTTAAAAGCTGAT-C-A GCAACCTGAATAGCT TERM 1771 1454217 - 1454180 - G 100 -14.5 -3.4959 | gap 1, overlap 1454178 1454174 1454183 1454211 ATAATAAAATCAATA GCATCAGCTTTTAACCCA GAC TGAGTTAAAAGCTGAT-C AGCAACCTGAATAGC TERM 1772 1454215 - 1454183 - G 100 -17.3 -2.86186 | overlap 1454180 1454178 1454174 1454211 ATAAAATCAATAGCA TCAGCTTTTAACCCA GAC TGAGTTAAAAGCTGA TCAGCAACCTGAATA SPy_1755 1454829 - 1454395 - | MarR family transcriptional regulator phaB 1455697 - 1454906 - | enoyl-CoA hydratase TERM 1773 1455271 - 1455255 - G 84 -7.9 -4.68511 | overlap 1455256 GTCAATAGAAATAAA CCACCGG CAT CCGGTGC TAGTCCAACATTTAC TERM 1774 1455270 - 1455256 - G 85 -11.4 -3.40022 | overlap 1455255 TCAATAGAAATAAAC CACCGG CAT CCGGTG CTAGTCCAACATTTA TERM 1775 1455906 - 1455871 - R 100 -9.9 -5.47218 | opp_overlap 1455871 TTTGACGTAAAAAAA CGTATAACTTCGGGA AAATTA TCCTGAAATTATACG TTTGACATCTTTAAA TERM 1776 1455871 - 1455906 + r 82 -9.9 -3.695 | opp_overlap 1455871 TTTGACGTAAAAAAA CGTATAACTTCGGGA AAATTA TCCTGAAATTATACG TTTGACATCTTTAAA dnaJ 1457053 - 1455917 - | heat-shock (chaperone) protein TERM 1777 1456107 - 1456128 + g 70 -5.9 -4.33907 | gap 1, overlap 1456093 CGGAGTTTTGGTGCT CCTTT-GCCT TTG AGGCGGAAGG TTTTACCTGTTTGTG TERM 1778 1456712 - 1456698 - G 73 -8.6 -3.64866 | opp_overlap 1456692, overlap 1456686 ACACGATATTGCAAA TCGTCA CCT TGACGA GGGGCATTTGGGTTT TERM 1779 1457201 - 1457216 + r 73 -7.6 -3.82605 | CACGCTTTAGCCTGT GTTCGA ATAA TCGAAC TTGTATTCCTTTCTT TERM 1780 1457298 - 1457277 - R 93 -8.8 -4.67353 | opp_overlap 1457270 1457267 1457279 TTATTTAGCCAAAAA CAGAGGTT TGGTAC AACCTCTG AATTCGGATATTAAT dnaK 1459160 - 1457334 - | molecular chaperone DnaK grpE 1459913 - 1459341 - | putative Hsp-70 cofactor TERM 1781 1459825 - 1459835 + g 71 -6.8 -4.03888 | GTCTCTTCAGTTTCA GTGG CTT CCAC TTCTTCTTGTAAATC hrcA 1460950 - 1459916 - | heat-inducible transcription repressor TERM 1782 1460972 - 1460998 + r 78 -7.4 -4.14004 | ACCACTCCCTTTCGT TTAGCACTCTAT TTA GTAGACTGCTAA TTTATAATTCTATTA TERM 1783 1461092 - 1461046 - R 83 -2.4 -5.80364 | opp_overlap 1461056, overlap 1461056 ATGTCAAGAAAAAAA CTCAAAAAAATTAGCACTCTTT TAT AAAGAGCGCTAATTTCAGTCAT AGTTTGTTAAATCGT TERM 1784 1461082 - 1461056 - R 100 -13.2 -5.63857 | opp_overlap 1461056, overlap 1461046 AAAAACTCAAAAAAA TTAGCACTCTTT TAT AAAGAGCGCTAA TTTCAGTCATAGTTT TERM 1785 1461056 - 1461082 + r 89 -11 -3.70438 | opp_overlap 1461056 1461046 AAAAACTCAAAAAAA TTAGCACTCTTT TAT AAAGAGCGCTAA TTTCAGTCATAGTTT SPy_1764 1461654 - 1461085 - | N-acetylmuramoyl-L-alanine amidase TERM 1786 1461133 - 1461143 + g 70 -5.4 -4.45485 | GACCTGAATTAGTCG CCTA GCA TAGG TTTTATCAGTATAAT SPy_1765 1462394 - 1461651 - | putative D,D-carboxypeptidase SPy_1766 1463091 - 1462384 - | putative phosphoglycerate mutase TERM 1787 1463440 - 1463487 + r 93 -14.4 -2.60211 | opp_overlap 1463451, overlap 1463451 AGATAAGACATTTTA TGTTGCAAAAAGGCTGCTTGGA AACT TCCATGCAGCCTTTTTTTAATA CCTTTTTCCAAAAAT TERM 1788 1463451 - 1463476 + r 100 -13.3 -5.54894 | opp_overlap 1463451, overlap 1463440 TTTATGTTGCAAAAA GGCTGCTTGGA AACT TCCATGCAGCC TTTTTTTAATACCTT TERM 1789 1463476 - 1463451 - R 100 -13.3 -4.58395 | opp_overlap 1463440 1463451 TTTATGTTGCAAAAA GGCTGCTTGGA AACT TCCATGCAGCC TTTTTTTAATACCTT SPy_1768 1463721 - 1463482 - | hypothetical protein SPy_1769 1464155 - 1463940 - | hypothetical protein TERM 1790 1464105 - 1464081 - G 81 -5.6 -5.05601 | CATGACATACAAAAA GGCAGCCTGT GAAAG ACCGACCGCC TTTTTTTCAGAGACA gatB 1465591 - 1464152 - | aspartyl/glutamyl-tRNA amidotransferase subunit B gatA 1467057 - 1465591 - | aspartyl/glutamyl-tRNA amidotransferase subunit A gatC 1467359 - 1467057 - | aspartyl/glutamyl-tRNA amidotransferase subunit C TERM 1791 1467574 - 1467539 - R 100 -20 -5.24989 | CCATACAGCAAAAAA CTTCCTGACTAAGGTC AGAA AACCTTAGTCAGGAAG TGTGACAAACTAAAC SPy_1776 1468908 - 1468354 - | putative pyrazinamidase/nicotinamidase TERM 1792 1469017 - 1469045 + r 83 -6.1 -5.19879 | opp_overlap 1469022, overlap 1469019 1469022 CTACCATTAACAGCA AAAAACATCTCTT TTC AAGAGATGTTGTC TTTTTCTATTTAAAA TERM 1793 1469019 - 1469043 + r 85 -8.7 -4.22132 | opp_overlap 1469022, overlap 1469017 1469022 ACCATTAACAGCAAA AAACATCTCTT TTC AAGAGATGTTG TCTTTTTCTATTTAA TERM 1794 1469022 - 1469040 + r 100 -10.4 -4.17582 | opp_overlap 1469022, overlap 1469019 1469017 ATTAACAGCAAAAAA CATCTCTT TTC AAGAGATG TTGTCTTTTTCTATT TERM 1795 1469040 - 1469022 - R 100 -10.4 -5.28683 | opp_overlap 1469022 1469019 1469017 ATTAACAGCAAAAAA CATCTCTT TTC AAGAGATG TTGTCTTTTTCTATT codY 1469837 - 1469055 - | transcriptional repressor CodY TERM 1796 1469260 - 1469270 + g 73 -6.8 -4.15066 | opp_overlap 1469259 1469269, overlap 1469269 AACTCTCCAAGAATT GCTG CAA CAGC TTTCATTTCTGAATA SPy_1779 1471269 - 1470055 - | aminotransferase AlaT TERM 1797 1470288 - 1470278 - G 71 -6.8 -3.99693 | opp_overlap 1470278, overlap 1470276 GGAAATAAATAAAGA CCTG CTT CAGG TTTAACTGCCGATAA TERM 1798 1471470 - 1471456 - g 83 -3.6 -5.68023 | opp_overlap 1471456 GTATAATGAAAAAAA GAATAA AAG CTATTC TTGTCAAACTGTTAA SPy_1780 1471446 - 1471952 + | hypothetical protein SPy_1781 1473463 - 1472075 - | hypothetical protein TERM 1799 1472905 - 1472925 + g 70 -3.3 -4.84642 | TTCTTGTAATTTTTA TATGAGGGA ACT TCTCTTGTA TTTTCTTAGTTTCAG asnB 1473535 - 1474500 + | L-asparaginase TERM 1800 1474512 - 1474553 + T 100 -18.4 -2.9587 | opp_overlap 1474519, overlap 1474519 ATAATCTAGCTTCCT TTAGAAATGTCCCACTAA AACATA TTAGTGGGACATTTCTAG TACTTTAAGCTTTAA TERM 1801 1474519 - 1474546 + T 100 -12.9 -4.04209 | opp_overlap 1474519, overlap 1474512 AGCTTCCTTTAGAAA TGTCCCACTAA AACATA TTAGTGGGACA TTTCTAGTACTTTAA TERM 1802 1474546 - 1474519 - T 95 -12.9 -3.85817 | opp_overlap 1474519 1474512 AGCTTCCTTTAGAAA TGTCCCACTAA AACATA TTAGTGGGACA TTTCTAGTACTTTAA SPy_1783 1475553 - 1474849 - | hypothetical protein SPy_1784 1476468 - 1475566 - | putative ABC transporter ATP-binding protein TERM 1803 1476044 - 1476028 - G 77 -5.1 -4.88228 | overlap 1476030 ATCCAAGATTAAAAA TTCTGGA AAA TCCAGTA TCGAAAGACCAATAG recG 1478776 - 1476761 - | putative ATP-dependent DNA helicase TERM 1804 1478949 - 1478913 - R 72 -8 -3.34716 | opp_overlap 1478916, overlap 1478912 1478914 TGAGGTCTCAAAAAT CCCGAGTGGCGTCAAT ACGAG ATTGACGCCACTCTTT TACCACAGCAAAAAG TERM 1805 1478948 - 1478914 - R 83 -11.5 -2.60508 | opp_overlap 1478916, overlap 1478913 1478912 GAGGTCTCAAAAATC CCGAGTGGCGTCAAT ACGAG ATTGACGCCACTCTT TTACCACAGCAAAAA TERM 1806 1478916 - 1478946 + r 100 -18.5 -4.07568 | opp_overlap 1478914 1478913 1478912 GGTCTCAAAAATCCC GAGTGGCGTCAAT ACGAG ATTGACGCCACTC TTTTACCACAGCAAA TERM 1807 1479006 - 1478996 - R 76 -6.8 -4.56597 | CTTTGTGTGTAAAAA TCGG AAA CCGA ATGTCAAATCAGCAG TERM 1808 1479070 - 1479092 + r 80 -9.3 -3.60072 | overlap 1479067 TTGTCTACGTTCTGA CTCTTGTAT CTATT ATACAAGAG TTCCTATTTATTTTC SPy_1787 1480545 - 1479151 - | putative ABC transporter ATP-binding protein TERM 1809 1480085 - 1480098 + g 71 -6.7 -4.04587 | CCTTGCATAATGGCC GTTGC AATA GCAAC TCTTTGTTTTTGCCC SPy_1788 1481222 - 1480542 - | hypothetical protein SPy_1789 1481812 - 1481219 - | hypothetical protein SPy_1790 1483479 - 1481809 - | ABC transporter ATP-binding protein SPy_1791 1485235 - 1483472 - | ABC transporter ATP-binding protein SPy_1793 1486068 - 1485232 - | putative ABC transporter ATP-binding protein SPy_1794 1487087 - 1486065 - | putative ABC transporter (permease) TERM 1810 1486312 - 1486292 - G 87 -8.3 -4.49958 | overlap 1486309 AGCCTAGGAAAGAAA CCACTCCAA CGA TCGAAGTGG CTACCGAAGCCAATA SPy_1795 1487973 - 1487089 - | putative ABC transporter (periplasmic binding protein) SPy_1796 1488832 - 1487957 - | hypothetical protein TERM 1811 1488455 - 1488466 + g 72 -4.4 -4.70266 | TAGTGTTGTCCCATT GGTA TCAG TACC TTTTTGGGTGATATT SPy_1798 1492856 - 1489029 - | hypothetical protein TERM 1812 1493242 - 1493216 - R 100 -9.5 -5.89921 | opp_overlap 1493221 ATCACAATAAAAAAA GACAATAGCCC TAATC GTGCTATTGTC TCAAAATCATTTATT isp2 1494856 - 1493345 - | immunogenic secreted protein precursor-like protein TERM 1813 1494683 - 1494695 + g 82 -4.1 -5.4593 | AGTTTTATCTGATGT TGTAG GTG CTGCA TTTTTATTATTTTCC alr 1496043 - 1494943 - | alanine racemase acpS 1496396 - 1496040 - | 4'-phosphopantetheinyl transferase TERM 1814 1496479 - 1496443 - R 90 -11.7 -3.79071 | opp_overlap 1496449 1496452, overlap 1496445 GTTAGAAGATTTAAA CAGTGAGAAGCTGAGAA TTA TTCTCAGCTTCTTTCTA TATACCTAACTTTGT TERM 1815 1496477 - 1496445 - R 90 -12.1 -3.47542 | opp_overlap 1496449 1496452, overlap 1496443 TAGAAGATTTAAACA GTGAGAAGCTGAGAA TTA TTCTCAGCTTCTTTC TATATACCTAACTTT TERM 1816 1496449 - 1496473 + r 100 -15.9 -4.1399 | opp_overlap 1496445 1496443, overlap 1496452 AGATTTAAACAGTGA GAAGCTGAGAA TTA TTCTCAGCTTC TTTCTATATACCTAA TERM 1817 1496452 - 1496470 + r 100 -11.8 -4.18674 | opp_overlap 1496445 1496443, overlap 1496449 TTTAAACAGTGAGAA GCTGAGAA TTA TTCTCAGC TTCTTTCTATATACC secA 1499031 - 1496512 - | preprotein translocase subunit SecA TERM 1818 1498945 - 1498956 + g 86 -4.4 -5.51165 | CGCCATTTGGTCTGC GTAG GATT CTAC TTTTTTTGCAATTTT SPy_1806 1499192 - 1499109 - | hypothetical protein SPy_1807 1500330 - 1499197 - | IS1548 transposase pmi 1501445 - 1500492 - | putative mannose-6-phosphate isomerase scrK 1502424 - 1501540 - | putative fructokinase TERM 1819 1502604 - 1502556 - R 86 -12.8 -2.77781 | opp_overlap 1502556 1502561 1502570, overlap 1502561 TGTCATCAAAACCTA TAAAAGACTAAAAATCTGGGAC TATTC ATCTCAGATTTTTAGTCTTTTG GTTAATCAATTCCAG TERM 1820 1502556 - 1502604 + r 100 -16.5 -2.52933 | opp_overlap 1502556 1502561, overlap 1502561 1502570 TGTCATCAAAACCTA TAAAAGACTAAAAATCTGGGA CTATTCA TCTCAGATTTTTAGTCTTTTG GTTAATCAATTCCAG TERM 1821 1502599 - 1502561 - R 100 -12.7 -4.54477 | opp_overlap 1502556 1502561 1502570, overlap 1502556 TCAAAACCTATAAAA GACTAAAAATCTGGGAC TATTC ATCTCAGATTTTTAGTC TTTTGGTTAATCAAT TERM 1822 1502561 - 1502599 + r 100 -14.2 -4.45945 | opp_overlap 1502561 1502556, overlap 1502556 1502570 TCAAAACCTATAAAA GACTAAAAATCTGGGA CTATTCA TCTCAGATTTTTAGTC TTTTGGTTAATCAAT SPy_1813 1505675 - 1502688 - | hypothetical protein TERM 1823 1503752 - 1503766 + g 73 -7.8 -3.89085 | TTTTCCCATAGGTAT CTGGGT AAT GCCCAG TTGGTTTTTGCTTGT TERM 1824 1505872 - 1505905 + r 93 -10.4 -4.015 | opp_overlap 1505880, overlap 1505880 CTGCCATCCATGGCA GGACAAAAGAGCTG CTTAGT TAGCTCTTTTGACC TTATTTGATAAGTGC scrA 1507790 - 1505928 - | PTS system, sucrose-specific IIABC component scrB 1508032 - 1509471 + | putative sucrose-6-phosphate hydrolase scrR 1509476 - 1510441 + | putative sucrose operon repressor TERM 1825 1510469 - 1510527 + T 100 -17.1 -3.15699 | opp_overlap 1510475 1510481, overlap 1510475 1510481 CAATCACTAATTACT CTAAAAGACAAACAAGCTTACTCTTTC TAGAT GCGAGAGTATGCTTGTTTGTCTTTTAA TATTCGTACATAAAT TERM 1826 1510521 - 1510475 - T 100 -13.9 -4.17023 | opp_overlap 1510469 1510475 1510481, overlap 1510481 CTAATTACTCTAAAA GACAAACAAGCTTACTCTTTC TAGAT GCGAGAGTATGCTTGTTTGTC TTTTAATATTCGTAC TERM 1827 1510475 - 1510521 + T 100 -16.1 -4.44797 | opp_overlap 1510475 1510481, overlap 1510469 1510481 CTAATTACTCTAAAA GACAAACAAGCTTACTCTTTC TAGAT GCGAGAGTATGCTTGTTTGTC TTTTAATATTCGTAC TERM 1828 1510481 - 1510515 + T 82 -7.9 -4.49352 | opp_overlap 1510481 1510475, overlap 1510475 1510469 ACTCTAAAAGACAAA CAAGCTTACTCTTTC TAGAT GCGAGAGTATGCTTG TTTGTCTTTTAATAT TERM 1829 1510577 - 1510551 - T 85 -6.7 -5.24449 | gap 1, opp_overlap 1510551 CATAAATTGAAAAAA TCGGATACAATC CTAA GATTGC-TCCGA CTTATTATGATTTAT nusB 1511034 - 1510582 - | transcription antitermination protein NusB TERM 1830 1510989 - 1510979 - G 76 -6.8 -4.44046 | TCTATGTTAAATAAA GCCT GAA AGGC ACGTTCACGCAAATC SPy_1820 1511416 - 1511027 - | hypothetical protein efp 1512019 - 1511462 - | elongation factor P comEB 1512576 - 1512115 - | putative late competence protein required for DNA binding pepP 1513684 - 1512611 - | Xaa-Pro dipeptidase TERM 1831 1513793 - 1513776 - R 82 -7.7 -4.55826 | TTTAAAAGATTAAAA GGAGCTC AAAC GAACTCC TAATCCTATTGTTGT uvrA 1516627 - 1513799 - | excinuclease ABC subunit A TERM 1832 1514191 - 1514211 + g 71 -6.9 -4.11216 | GTCCAACATCCTTAA TCGTTTGAA TTT TTCGAGCGA TTTTAGGAATAGCAG SPy_1827 1516830 - 1517774 + | putative divalent cation transport protein TERM 1833 1518164 - 1518146 - g 71 -3.8 -4.95896 | opp_overlap 1518148, overlap 1518148 AGAAACTGACAAAAA CACCAATC CTT GGTTGATG TGGCTAGATACCTCT SPy_1828 1517907 - 1518563 + | hypothetical protein TERM 1834 1518575 - 1518595 + T 80 -6.9 -4.6038 | ATAACAATCATTTCA TCCTTGC TGTCTAC GCAAGGA TTTTCGTTTACTATC TERM 1835 1518664 - 1518695 + T 75 -9 -3.44334 | gap 1, opp_overlap 1518671, overlap 1518671 CTAGTCCTAGTCAAC TAAA-AAACAGTCCG AAA TGGACTGTTTGTTTA TTAGTCTTCGTTTAC TERM 1836 1518671 - 1518687 + T 93 -8.7 -4.71791 | opp_overlap 1518671, overlap 1518664 TAGTCAACTAAAAAA CAGTCCG AAA TGGACTG TTTGTTTATTAGTCT TERM 1837 1518687 - 1518671 - T 90 -8 -5.28481 | opp_overlap 1518671 1518664 TAGTCAACTAAAAAA CAGTCC GAAAT GGACTG TTTGTTTATTAGTCT rpsR 1518935 - 1518696 - | 30S ribosomal protein S18 SPy_1830 1519591 - 1519100 - | single-strand DNA-binding protein rpsF 1519903 - 1519613 - | 30S ribosomal protein S6 SPy_1832 1520369 - 1520076 - | hypothetical protein mutY 1520567 - 1521691 + | putative A/G-specific adenine glycosylase TERM 1838 1521698 - 1521716 + F 82 -5.3 -5.29846 | AATGCTTAATCGCAA GTGAACT ATAAC GGTTCAC TTTTTGTTTACAATT TERM 1839 1521733 - 1521750 + F 72 -4.9 -4.70266 | TTTTGTTTACAATTC CTTTACG CCGC TGTAAAG TTTTTCGGTGATATT SPy_1834 1521767 - 1522354 + | hypothetical protein TERM 1840 1522367 - 1522405 + T 100 -17 -3.09933 | opp_overlap 1522373 1522377, overlap 1522373 1522377 TGAAGTTAGTAGGTC ATAAAATAAAGCTCAGCG TGA CGCTGGGCTTTATTTTAG TTAACTCAATTCAGC TERM 1841 1522399 - 1522373 - T 100 -13.8 -4.40804 | opp_overlap 1522373 1522367 1522377, overlap 1522377 TAGTAGGTCATAAAA TAAAGCTCAGCG TGA CGCTGGGCTTTA TTTTAGTTAACTCAA TERM 1842 1522373 - 1522399 + T 100 -16 -4.43477 | opp_overlap 1522373 1522377, overlap 1522367 1522377 TAGTAGGTCATAAAA TAAAGCTCAGCG TGA CGCTGGGCTTTA TTTTAGTTAACTCAA TERM 1843 1522395 - 1522377 - T 100 -10.2 -4.77775 | opp_overlap 1522373 1522367 1522377, overlap 1522373 AGGTCATAAAATAAA GCTCAGCG TGA CGCTGGGC TTTATTTTAGTTAAC TERM 1844 1522377 - 1522395 + T 100 -12.4 -4.78077 | opp_overlap 1522377 1522373, overlap 1522373 1522367 AGGTCATAAAATAAA GCTCAGCG TGA CGCTGGGC TTTATTTTAGTTAAC trx 1522720 - 1522406 - | putative thioredoxin SPy_1836 1523304 - 1522801 - | hypothetical protein mutS2 1525644 - 1523305 - | putative DNA mismatch repair protein TERM 1845 1525770 - 1525741 - R 78 -7.3 -4.41348 | gap 1, opp_overlap 1525741 TTTCTCGTAAATAAA GAACCTAAAGGTGA AAC TCA-CTCCAGGTTC TTATATTAGTCACAA SPy_1839 1526338 - 1525793 - | hypothetical protein SPy_1840 1526649 - 1526341 - | hypothetical protein TERM 1846 1526611 - 1526625 + g 77 -8.6 -3.89881 | CAATGTTAATGTTTT TTCACC AAA GGTGAA TTTATAGCGATTAAT TERM 1847 1527191 - 1527181 - g 70 -2.6 -5.06451 | GATGATTCTAAAAAA TTAT CGG ATAA AACCATTCAACAGAT SPy_1841 1526806 - 1527708 + | ribonuclease HIII TERM 1848 1527751 - 1527737 - g 73 -8.6 -3.76781 | opp_overlap 1527736 AAACAGTTTATTAAA GAATGG GGC CCATTC ACTCTCTTTTTAATT spi 1527719 - 1528312 + | putative signal peptidase I TERM 1849 1528334 - 1528319 - f 100 -10.4 -5.37345 | opp_overlap 1528319 TTTAATTAGAAAAAA CCTGCC TTTG GGCAGG TTTTCAGTTATCTTG TERM 1850 1528319 - 1528334 + F 100 -10.4 -4.35874 | opp_overlap 1528319 TTTAATTAGAAAAAA CCTGCC TTTG GGCAGG TTTTCAGTTATCTTG SPy_1844 1528370 - 1530823 + | putative exodeoxyribonuclease V (alpha subunit) TERM 1851 1530944 - 1530932 - g 74 -4.8 -4.7254 | ATTTCTTATGAAAAA GTGC GTCAG GCAC TCAAAACGTCTACTA TERM 1852 1531292 - 1531275 - g 70 -8.5 -3.35015 | overlap 1531278 TTAACCAGTTCACAA CAACCAT GTCA ATGGTTG GAACTATCCTTATCC SPy_1845 1530914 - 1531396 + | hypothetical protein TERM 1853 1531457 - 1531402 - T 84 -8.39999 -4.63932 | opp_overlap 1531414, overlap 1531405 1531414 1531417 TATGCTGTAATAAAA TAATGGACCAAAGAAGCTGATTAGGG AAAT CCCTAATCAGCTTCTTTTTTCTCCAA AATGAGGCGGACGGA TERM 1854 1531454 - 1531405 - T 100 -12.3 -4.43307 | opp_overlap 1531414, overlap 1531402 1531414 1531417 GCTGTAATAAAATAA TGGACCAAAGAAGCTGATTAGGG AAAT CCCTAATCAGCTTCTTTTTTCTC CAAAATGAGGCGGAC TERM 1855 1531445 - 1531414 - T 100 -20.4 -3.82531 | opp_overlap 1531414, overlap 1531405 1531402 1531417 AAATAATGGACCAAA GAAGCTGATTAGGG AAAT CCCTAATCAGCTTC TTTTTTCTCCAAAAT TERM 1856 1531414 - 1531445 + T 100 -20.4 -5.24531 | opp_overlap 1531405 1531402 1531414 1531417 AAATAATGGACCAAA GAAGCTGATTAGGG AAAT CCCTAATCAGCTTC TTTTTTCTCCAAAAT TERM 1857 1531442 - 1531417 - T 100 -16.3 -4.02571 | opp_overlap 1531414, overlap 1531414 1531405 1531402 TAATGGACCAAAGAA GCTGATTAGGG AAAT CCCTAATCAGC TTCTTTTTTCTCCAA dinP 1532583 - 1531489 - | DNA polymerase IV TERM 1858 1533157 - 1533131 - g 71 -6.5 -4.14511 | AACTTCATGCCAAAA GGTGGTATCCG TATGG CGGAAACGACC CTTAAAGAAAACGGC pfl 1532792 - 1535119 + | putative pyruvate formate-lyase TERM 1859 1535191 - 1535152 - T 100 -17.5 -5.3236 | opp_overlap 1535152 ATAACTTATAAAAAA GAACAGCCATCTCATTT GATTCA AAATGAGATGGCTATTC TTTTTTCACTTATAA TERM 1860 1535152 - 1535191 + T 100 -15.3 -5.1925 | opp_overlap 1535152 ATAACTTATAAAAAA GAACAGCCATCTCATTT GATTCA AAATGAGATGGCTATTC TTTTTTCACTTATAA SPy_1850 1536247 - 1535297 - | putative esterase SPy_1851 1536984 - 1536232 - | putative C3-degrading proteinase TERM 1861 1537315 - 1537336 + G 80 -2.2 -5.67711 | overlap 1537312 CTTAGACTGATACAA GCTTTGCT AGTTTC GGCAATGC TTTTTATTTTCTTTA TERM 1862 1537620 - 1537632 + G 85 -9.1 -4.18702 | AACTTTACTTGCTAT GGCTG CAG CAGCC TTTATTGGAGCTTAT SPy_1852 1537291 - 1538178 + | hypothetical protein TERM 1863 1538184 - 1538211 + T 75 -4.9 -4.98616 | opp_overlap 1538184 AAATAGATAAGATAA CGTTTCTGG GAATCACTAA CCAGAGACG TTTTTAATATTTTAC TERM 1864 1538483 - 1538459 - T 79 -4.3 -5.38951 | opp_overlap 1538459 AACTCATATAAAAAA GACAAGTTC CTTAAGC GAGCTTGTC TTGAGTCTAAAAGAA glpF.2 1539461 - 1538514 - | putative glycerol uptake facilitator protein TERM 1865 1539530 - 1539490 - R 73 -4.1 -4.97957 | gap 1, opp_overlap 1539490 1539492 1539494 CACACAATAATAAAA GCGGTAAAGAAAAGGACC ATAAAA GG-CCTTATCTTTATCAC TTTATTTCATAGTAT norA 1541159 - 1539864 - | putative antibiotic resistance protein NorA TERM 1866 1540241 - 1540214 - G 76 -2.1 -5.42259 | gap 1, opp_overlap 1540221, overlap 1540219 1540220 CCATTGCTAAAAAAA GATAACTTGGGT ACAAG ACCCAT-TTATC GCCTTTAGCATCCAT TERM 1867 1541038 - 1541048 + g 74 -4 -5.13741 | opp_overlap 1541035, overlap 1541035 ATGGCCACAAAATGT TTGT TAA ACAA TTTTTCTTCCATTGA SPy_1857 1541166 - 1541885 + | putative transcriptional regulatory protein TERM 1868 1542652 - 1542616 - g 87 -5.1 -5.41143 | opp_overlap 1542625, overlap 1542625 1542628 TAGTCGTTAAAAAAA GGAGACAAATCACTGTC GAA GACAGGGATTTTATTCC TCTTGAGACACAGCC TERM 1869 1542643 - 1542625 - g 76 -7.4 -4.24562 | opp_overlap 1542625, overlap 1542616 1542628 AAAAAAGGAGACAAA TCACTGTC GAA GACAGGGA TTTTATTCCTCTTGA TERM 1870 1542625 - 1542643 + G 83 -7.4 -4.78753 | opp_overlap 1542616 1542625 1542628 AAAAAAGGAGACAAA TCACTGTC GAA GACAGGGA TTTTATTCCTCTTGA TERM 1871 1542910 - 1542898 - g 75 -5.5 -4.67353 | CCAGCCACTCAAAAA CCCAC CAA GTGAG AGCTGATTGGGCAAA pepXP 1541907 - 1544189 + | x-prolyl-dipeptidyl aminopeptidase TERM 1872 1544227 - 1544194 - f 81 -7.6 -4.41302 | opp_overlap 1544199, overlap 1544199 CATCAAATTAACAAA GAAAAGTGCTTAGC AATATA ACTAAGCACTTTTT TGTTAATTGGTCTTA TERM 1873 1544222 - 1544199 - f 88 -7.5 -5.13527 | opp_overlap 1544199, overlap 1544194 AATTAACAAAGAAAA GTGCTTAGC AATATA ACTAAGCAC TTTTTTGTTAATTGG TERM 1874 1544199 - 1544222 + F 87 -6.8 -5.5604 | opp_overlap 1544199 1544194 AATTAACAAAGAAAA GTGCTTAG CAATATAA CTAAGCAC TTTTTTGTTAATTGG TERM 1875 1544330 - 1544304 - f 74 -2.2 -5.42259 | overlap 1544306 1544307 CTATTCCTAAAAAAA TATCATCAACGG AAA CCGCTAATGCTT GGGCAATACCTTTTA TERM 1876 1544327 - 1544307 - f 70 -8.3 -3.19966 | overlap 1544306 1544304 TTCCTAAAAAAATAT CATCAACGG AAA CCGCTAATG CTTGGGCAATACCTT SPy_1861 1544661 - 1545035 + | putative repressor - phage associated SPy_1862 1545228 - 1545527 + | hypothetical protein TERM 1877 1545564 - 1545539 - T 100 -10.5 -5.86609 | opp_overlap 1545539 CTAAAAAAACAAAAA CTAGCTTGAGA AGGA TCTCAGGCTAG TTTTTTTATGAGTTA TERM 1878 1545539 - 1545564 + T 100 -12.7 -5.66684 | opp_overlap 1545539 CTAAAAAAACAAAAA CTAGCTTGAGA AGGA TCTCAGGCTAG TTTTTTTATGAGTTA SPy_1863 1546321 - 1545584 - | putative transcriptional activator regulator protein dnaQ 1547096 - 1546470 - | DNA polymerase III subunit epsilon TERM 1879 1547088 - 1547074 - G 86 -7.8 -5.00616 | opp_overlap 1547074 TTTTCCTCCAAAAAA GACCCT GAT AGGGCC TTCGTCATCTTTTGT SPy_1865 1547687 - 1547106 - | hypothetical protein TERM 1880 1547960 - 1547946 - g 83 -3.5 -5.53288 | CTTAATTGAAAAAAA TCGCC GCTTA GGCAA AAAATTAGCGGGAAC TERM 1881 1548799 - 1548771 - g 76 -4.6 -5.093 | TCCAAAACAAGAAAA GGAATTGCTTGA TAAAC TCAAACACCTCC AGATACCCATTACAG SPy_1866 1547842 - 1549011 + | hypothetical protein TERM 1882 1549020 - 1549044 + T 100 -9.4 -4.70266 | opp_overlap 1549020 TTCATAGCTAAAAAA GCCTATTATC ACTAA GATAGTAGGC TTTTTAACTCCTATT TERM 1883 1549044 - 1549020 - T 88 -7.2 -5.1287 | opp_overlap 1549020 TTCATAGCTAAAAAA GCCTATTATC ACTAA GATAGTAGGC TTTTTAACTCCTATT TERM 1884 1549052 - 1549066 + T 86 -2.8 -5.83211 | TAGTAGGCTTTTTAA CTCCTA TTA TATGAG TTTTTTGTTTTAGTC deoC 1549777 - 1549106 - | putative deoxyribose-phosphate aldolase nupC 1551009 - 1549807 - | putative nucleoside transporter udp 1551809 - 1551030 - | putative uridine phosphorylase TERM 1885 1551886 - 1551900 + H 75 -5 -4.91573 | opp_overlap 1551886 ACTCTATTTTGTAAA CGCTTT TTT AAAGTG TTTTTCATCTCTTTT SPy_1870 1552049 - 1552792 + | GntR family transcriptional regulator TERM 1886 1552973 - 1552941 - f 85 -12.2 -2.98729 | overlap 1552950 TATAATGATTATATA TCCACTTAACCAGT TAAAT ACCAGTTAAGTGGA TTCAGAGCGCTGATA rpsN 1553028 - 1553297 + | 30S ribosomal protein S14 TERM 1887 1553385 - 1553412 + T 100 -14.3 -5.00616 | opp_overlap 1553388 TACTTATCATCATGA CAACCCGGTAT GCCAAG ATACCGGGTTG TTTTTTCAAAGGGAG TERM 1888 1553409 - 1553388 - T 85 -10.2 -3.45023 | opp_overlap 1553385 TTATCATCATGACAA CCCGGTAT GCCAAG ATACCGGG TTGTTTTTTCAAAGG SPy_1872 1554496 - 1553468 - | O-sialoglycoprotein endopeptidase SPy_1873 1554911 - 1554486 - | putative ribosomal-protein-alanine acetyltransferase SPy_1874 1555611 - 1554913 - | putative glycoprotein endopeptidase SPy_1875 1555896 - 1556126 + | hypothetical protein TERM 1889 1556247 - 1556290 + G 79 -9.8 -3.63341 | gap 1, opp_overlap 1556257, overlap 1556257 CATTATCGTTGATGC CGGTATCAAATTCCCAGAAGA TGA TCTTTTGGGAA-TTGATTACG TTATTCCAGACTATT TERM 1890 1556257 - 1556281 + G 87 -12.3 -3.43049 | opp_overlap 1556257, overlap 1556247 GATGCCGGTATCAAA TTCCCAGAAGA TGA TCTTTTGGGAA TTGATTACGTTATTC TERM 1891 1556281 - 1556257 - g 80 -10.1 -3.72893 | opp_overlap 1556257 1556247 GATGCCGGTATCAAA TTCCCAGAAGA TGA TCTTTTGGGAA TTGATTACGTTATTC TERM 1892 1557703 - 1557690 - g 79 -6.7 -4.61482 | TGCTTTAAAAAATAA GGATG CTAG CATCC AATCAGTTAACGGTG SPy_1876 1556128 - 1557810 + | Zn-dependent hydrolase TERM 1893 1557925 - 1557888 - T 73 -7.9 -3.88015 | gap 1, opp_overlap 1557888 1557894, overlap 1557864 1557894 CAGATAATTATCAAA CTAAAA-CCAGTCCTCAT AGA ACATGGACTGGTTTTTAG TTTTCTATAATGGAA TERM 1894 1557918 - 1557894 - T 80 -7.1 -4.59376 | opp_overlap 1557888 1557894, overlap 1557888 ATTATCAAACTAAAA CCAGTCCTCAT AGA ACATGGACTGG TTTTTAGTTTTCTAT TERM 1895 1557894 - 1557918 + T 76 -4.3 -5.15526 | opp_overlap 1557894 1557888, overlap 1557888 ATTATCAAACTAAAA CCAGTCC TCATAGAACAT GGACTGG TTTTTAGTTTTCTAT TERM 1896 1558027 - 1558005 - T 100 -10.6 -4.19258 | ATAGCTCATCCAAAA GACCCACTCA ACT TGAGCAGGTC CTGATAAGTCTAATA glnA 1559383 - 1558037 - | putative glutamine synthetase TERM 1897 1559237 - 1559258 + g 80 -10.3 -3.63298 | opp_overlap 1559230 1559234, overlap 1559235 ATCAAACATAACCTT GTTAGACAA TACT TTGTCTAAC TGTTCTTTAGTTGCA SPy_1878 1559792 - 1559421 - | putative transcriptional regulator SPy_1879 1560410 - 1559859 - | hypothetical protein TERM 1898 1560037 - 1560023 - G 82 -7.8 -4.56133 | GTGTAATAATCAAAA GAGCAG CCA CTGCCC CAATAATACCTGATT TERM 1899 1560648 - 1560631 - R 93 -7.7 -5.65513 | opp_overlap 1560631 1560630 GATCAACTAAAAAAA GACATGC ATCA GCATGCC CTTTACTATATATTA pgk 1561869 - 1560673 - | phosphoglycerate kinase lppC 1562916 - 1562062 - | putative acid phosphatase SPy_1884 1564036 - 1563146 - | several hypersensitive-induced response proteins TERM 1900 1564062 - 1564082 + r 72 -8.4 -3.34232 | opp_overlap 1564065, overlap 1564065 CCTTGTCATATCTTA GAACTGAA CCGTT TTCAGTTC TTGACTTATTGTTAT TERM 1901 1564156 - 1564171 + r 71 -3.2 -5.03145 | TAACCATTAGCTTTG TGATGG ATTA CCCTCA TTTTTTAGGGGCTTA TERM 1902 1564251 - 1564230 - R 88 -7.3 -5.09685 | opp_overlap 1564230 CAATATAGACAAAAA GAGTCAGAC CTTT GCCTAACTC CTCTTTTTTTATTAT SPy_1885 1565937 - 1564273 - | hypothetical protein asp 1566302 - 1565937 - | putative alkaline-shock protein TERM 1903 1566457 - 1566423 - R 71 -8.9 -3.08696 | gap 1, opp_overlap 1566422 1566432 1566455, overlap 1566422 ATGGATAGAAATAAG CTAATAAAAA-AAGCC CTAA GGCTTATTTCTATTAG ATGCGTTCTACTTTA rpmB 1566642 - 1566454 - | 50S ribosomal protein L28 TERM 1904 1567000 - 1566987 - R 90 -8.1 -5.13473 | opp_overlap 1566987 1566988, overlap 1566988 ATTATATCTAAAAAA GCCCT CAAG AGGGC TTTAGGGTGTTTAAT TERM 1905 1566987 - 1567000 + r 73 -8.1 -3.69902 | opp_overlap 1566987 1566988, overlap 1566988 ATTATATCTAAAAAA GCCCT CAAG AGGGC TTTAGGGTGTTTAAT fba 1567905 - 1567024 - | fructose-bisphosphate aldolase TERM 1906 1568103 - 1568081 - R 100 -9.2 -5.95166 | opp_overlap 1568081 TTTAACCAAAAAAAA GAGACGAATC AAT GATTCACCTC TTACATTATGCGGAG SPy_1892 1569177 - 1568251 - | hypothetical protein TERM 1907 1569147 - 1569135 - G 71 -6.3 -4.30809 | TAAGAGTTATCAAAA GGAAT AGA ATTCC TAAATACTTTGCTAT pyrG 1570949 - 1569345 - | CTP synthetase TERM 1908 1571108 - 1571084 - R 76 -2.8 -5.54907 | overlap 1571086 TCTAGAAAACAAAAA TAGCCCCCTA TTAAC TAGAGAGCTT TTGCCTGACCTCATA rpoE 1571781 - 1571206 - | DNA-directed RNA polymerase subunit delta TERM 1909 1571971 - 1571945 - R 93 -8.1 -5.69262 | opp_overlap 1571945 TTAGAAAAAGAAAAA CCAGACTAGAA AGACG TTCTAATCCGG CTTGTACGTTTTGTT tig 1573281 - 1571998 - | trigger factor SPy_1897 1573602 - 1574447 + | hypothetical protein TERM 1910 1574510 - 1574463 - T 100 -10.3 -5.11033 | gap 1, opp_overlap 1574463 1574464, overlap 1574464 TATAATCTTAAAAAA TCCTTTTTTCTAGAA-AAAACA CCAAT TGTTTTATTCCAGAAAAAAGGG TTTAGGATTTACGGA TERM 1911 1574463 - 1574510 + T 87 -10.3 -3.71649 | gap 1, opp_overlap 1574463 1574464, overlap 1574464 TATAATCTTAAAAAA TCCTTTTTTCTAGAA-AAAACA CCAAT TGTTTTATTCCAGAAAAAAGGG TTTAGGATTTACGGA TERM 1912 1574464 - 1574509 + T 83 -11.6 -2.82668 | gap 1, opp_overlap 1574463 1574464, overlap 1574463 ATAATCTTAAAAAAT CCTTTTTTCTAGAA-AAAACA CCAAT TGTTTTATTCCAGAAAAAAGG GTTTAGGATTTACGG TERM 1913 1574509 - 1574464 - T 100 -13.8 -3.65535 | gap 1, opp_overlap 1574464 1574463, overlap 1574463 ATAATCTTAAAAAAT CCTTTTTTCTAGAA-AAAACA CCAAT TGTTTTATTCCAGAAAAAAGG GTTTAGGATTTACGG SPy_1898 1575069 - 1574512 - | hypothetical protein SPy_1899 1575556 - 1575086 - | hypothetical protein thiD 1576310 - 1575546 - | phosphomethylpyrimidine kinase TERM 1914 1576025 - 1576013 - G 70 -9.1 -3.11922 | opp_overlap 1576015, overlap 1576010 1576011 CAGGATCTAAAACCA CTGGG ATT CCCAG ATGCCCCTTTATAAA truA 1577049 - 1576300 - | tRNA pseudouridine synthase A comX1.2 1577785 - 1577234 - | ComX1-like protein TERM 1915 1577775 - 1577798 + g 100 -14 -5.68023 | opp_overlap 1577775 AGAACCACAAAAAAA CAACAGGACA TTAA TGTCCTGTTG TTTTTTTCATTATGC TERM 1916 1577798 - 1577775 - G 100 -14 -5.73339 | opp_overlap 1577775 AGAACCACAAAAAAA CAACAGGACA TTAA TGTCCTGTTG TTTTTTTCATTATGC TERM 1917 1577955 - 1577938 - R 89 -6.3 -5.61824 | opp_overlap 1577938, overlap 1577929 TAAAATGCAAAAAAA GATAGGA CGCT TCCTACC TCTCTCTACTCCGCC TERM 1918 1578573 - 1578583 + r 75 -8.2 -3.72576 | TTCTGAACCCAGCTC GCGG TGG CCGC TTTAATGGGCGAACA TERM 1919 1580888 - 1580867 - R 75 -10.1 -2.58544 | opp_overlap 1580868, overlap 1580866 TCGCAGTCCTACAAC CCCGAGGAG TAAA CTCCTCGGT TTGCCCTCCTGCCGT TERM 1920 1580868 - 1580887 + r 100 -13.6 -3.62096 | opp_overlap 1580867 1580866 CGCAGTCCTACAACC CCGAGGAG TAAA CTCCTCGG TTTGCCCTCCTGCCG TERM 1921 1583151 - 1583165 + r 93 -8.6 -4.65032 | AACTTACTCGTTCCT TCTGTC GCT GACAGA TTTATTTCTCGTTTC SPy_1903 1584585 - 1583512 - | hypothetical protein TERM 1922 1583654 - 1583634 - G 70 -2.5 -5.08824 | overlap 1583610 GTTGTATTGAAAAAA CAGCCAAAA AGT CTTCTGCTG CTAGTCCTGTCTCAA TERM 1923 1585628 - 1585602 - g 76 -4.4 -5.0809 | opp_overlap 1585605, overlap 1585596 1585605 AACAAACCACAAAAA GATCTCTTTGCC TTT GCCAAAGAAGTC CTATCTATCCCTCGT TERM 1924 1587052 - 1587076 + G 74 -9.3 -3.61398 | GCCTCTACTCTAATG GGGGTGAAAAC GAC GTTTTGGCCCC TTCTTGGGAAGAAGA hsdR 1584936 - 1587914 + | putative type I site-specific deoxyribonuclease TERM 1925 1588288 - 1588261 - g 70 -9.4 -2.60988 | opp_overlap 1588259, overlap 1588258 AAGGTAATGAATTTA TCTTTCAAATAT TAAA ATACTTGAAAGA AATTGGTTATTGGAA hsdS 1587927 - 1589126 + | putative type I site-specific deoxyribonuclease hsdM 1589139 - 1590719 + | putative type I site-specific deoxyribonuclease TERM 1926 1590727 - 1590765 + T 77 -9 -3.6715 | opp_overlap 1590732, overlap 1590732 1590734 GAAACTAAAAGACAA AAAAACACCACAGTAG ATGATTA CTACTGTGGCGTTTTA TTTAAAATTGAGTAG TERM 1927 1590732 - 1590760 + T 95 -8.9 -4.90525 | opp_overlap 1590732, overlap 1590727 1590734 TAAAAGACAAAAAAA CACCACAGTAG ATGATTA CTACTGTGGCG TTTTATTTAAAATTG TERM 1928 1590760 - 1590732 - T 100 -11.1 -5.9362 | opp_overlap 1590732 1590727 1590734 TAAAAGACAAAAAAA CACCACAGTAG ATGATTA CTACTGTGGCG TTTTATTTAAAATTG TERM 1929 1590734 - 1590758 + T 75 -10.1 -2.70854 | opp_overlap 1590732, overlap 1590732 1590727 AAAGACAAAAAAACA CCACAGTAG ATGATTA CTACTGTGG CGTTTTATTTAAAAT TERM 1930 1591012 - 1591037 + T 75 -8.5 -3.34233 | TAAAGTAGTTCCAAT CGTTGATATAT AAGC ATATATTAACG TTCTGGGAGTTGTGA TERM 1931 1591233 - 1591255 + T 85 -9.2 -4.04174 | opp_overlap 1591233 GGAAATCCCTAGCAA CGACACAAGT AAA ACTTATGTCG TTTGATTATCTGCAA TERM 1932 1591255 - 1591233 - T 87 -11.4 -3.17714 | opp_overlap 1591233 GGAAATCCCTAGCAA CGACACAAGT AAA ACTTATGTCG TTTGATTATCTGCAA salR 1591877 - 1591272 - | putative response regulator of salavaricin regulon salY 1595366 - 1593459 - | ABC transporter permease salX 1596105 - 1595368 - | ABC transporter ATP-binding protein salB 1598262 - 1596637 - | putative salivaricin A modification enzyme; amino acid dehydration TERM 1933 1598312 - 1598286 - R 100 -12.4 -4.68994 | opp_overlap 1598285 1598286 ACCACTACTTAAAAA TCCTGCCTAGAC TGA GTCTAAACAGGA AATTTTTAGTCTGCT salA 1598500 - 1598345 - | lantibiotic precursor lacG 1600409 - 1599003 - | 6-phospho-beta-galactosidase TERM 1934 1600477 - 1600440 - R 100 -11.7 -4.59511 | gap 1, opp_overlap 1600444, overlap 1600444 AATATCTTTCAAAAA TAAAGTTCCCAAA-ACAA TTT TTGTGTTTGAGAACTTTA CGACATTTAAACTGT TERM 1935 1600473 - 1600444 - R 90 -8.1 -4.85782 | gap 1, opp_overlap 1600444, overlap 1600440 TCTTTCAAAAATAAA GTTCCCAAA-ACAA TTT TTGTGTTTGAGAAC TTTACGACATTTAAA lacE 1602194 - 1600497 - | PTS system, lactose-specific IIBC component lacF 1602511 - 1602194 - | PTS system, lactose-specific IIA component lacD.2 1603518 - 1602535 - | tagatose 1,6-diphosphate aldolase lacC.2 1604451 - 1603522 - | tagatose-6-phosphate kinase lacB.2 1605014 - 1604499 - | galactose-6-phosphate isomerase subunit LacB TERM 1936 1604569 - 1604593 + g 86 -7.1 -5.10497 | GGGTTGTTTTGATCT TGGCTAGCATG TTG CAAGCTATCCA TTTTTTCAATCCATT lacA.2 1605477 - 1605049 - | galactose-6-phosphate isomerase subunit LacA TERM 1937 1605613 - 1605660 + H 95 -6.8 -5.85011 | gap 1, opp_overlap 1605613 1605617 1605644, overlap 1605617 1605635 CACCAAACATAAAAG TCAACATTTTTTGTTTTATTTTT ATA AAAAATAAA-CAAAATATGTTTA TTTTTTTCATTTTTA TERM 1938 1605617 - 1605656 + H 89 -7.6 -5.25976 | gap 1, opp_overlap 1605617 1605613 1605644, overlap 1605613 1605635 AAACATAAAAGTCAA CATTTTTTGTTTTATTTTT ATA AAAAATAAA-CAAAATATG TTTATTTTTTTCATT TERM 1939 1605660 - 1605644 - H 76 -3.8 -5.252 | opp_overlap 1605617 1605613 1605635, overlap 1605617 1605613 TATTTTTATAAAAAA TAAACA AAATA TGTTTA TTTTTTTCATTTTTA lacR.2 1605923 - 1606696 + | putative lactose phosphotransferase system repressor protein TERM 1940 1607027 - 1606984 - f 74 -9.1 -3.13867 | gap 1, opp_overlap 1606984, overlap 1606982 1606980 TTAGCCATCAACATA CCTCTTAAGTAGATTTTGGT TCGTT ACCATG-TCTACTTAAGAGG TGTCTTCAAAGCGCT TERM 1941 1606984 - 1607027 + F 84 -11.3 -3.06815 | gap 1, opp_overlap 1606984 1606982 1606980 TTAGCCATCAACATA CCTCTTAAGTAGATTTTGGT TCGTT ACCATG-TCTACTTAAGAGG TGTCTTCAAAGCGCT TERM 1942 1607089 - 1607099 + F 71 -3.2 -5.16472 | TTTGAGAATTGTGAA GCTT TAC GAGC TTTTTTAAGGTTTTT SPy_1926 1607352 - 1607639 + | DNA-damage-inducible protein J SPy_1927 1607629 - 1607964 + | hypothetical protein TERM 1943 1607996 - 1607975 - T 85 -8.7 -4.21314 | opp_overlap 1607975 AATAACACGTTAAAA GCCTTAGCA GTCT TGCTAGGGC TTTTTTGGTAGATTA TERM 1944 1607975 - 1607996 + T 100 -10.9 -5.18357 | opp_overlap 1607975 AATAACACGTTAAAA GCCTTAGCA GTCT TGCTAGGGC TTTTTTGGTAGATTA TERM 1945 1608756 - 1608736 - T 80 -4.7 -5.2853 | overlap 1608740 CAGCCAAAAAGAAAA GACACAACT AGC AGTTGCACC TCTTTCAATTAAGTC TERM 1946 1609136 - 1609162 + T 72 -8 -3.47941 | opp_overlap 1609136 AAAACGACAAAAAAA GCACCTTGCAAG AGA CTTGCAAAATGC TTGTAATCGTTGATG TERM 1947 1609162 - 1609136 - T 100 -12.4 -5.77632 | opp_overlap 1609136 AAAACGACAAAAAAA GCACCTTGCAAG AGA CTTGCAAAATGC TTGTAATCGTTGATG rpsI 1609581 - 1609189 - | 30S ribosomal protein S9 TERM 1948 1609465 - 1609482 + g 82 -4.2 -5.45652 | TAAGTCAGCATGTGG GATGTA TTCTTC TACATC TTTTTTGTTAACAGT rplM 1610048 - 1609602 - | 50S ribosomal protein L13 TERM 1949 1610246 - 1610260 + r 75 -10 -2.73875 | opp_overlap 1610245 1610244, overlap 1610243 CGATTTAGGAGAATG GCAGAG CTG CTCTGC TGGTGTTAACGAGAA SPy_1934 1610472 - 1610266 - | putative transcription regulator SPy_1935 1611008 - 1610469 - | hypothetical protein TERM 1950 1611077 - 1611100 + r 83 -10.4 -3.31322 | opp_overlap 1611077, overlap 1611088 TTAAGCAGCAAAAAA GGATTGAGGA TTTC TCTTCAATCC TTATAAGGGATTAAC TERM 1951 1611100 - 1611077 - R 90 -8.2 -5.2189 | opp_overlap 1611077 1611088 TTAAGCAGCAAAAAA GGATTGAGGA TTTC TCTTCAATCC TTATAAGGGATTAAC SPy_1936 1611971 - 1611111 - | hypothetical protein TERM 1952 1612055 - 1612041 - R 83 -4.9 -5.52986 | ATTTTATCAAAAAAA CCCGC ACTTG GCGAG TCGTAATTCTCATTA SPy_1937 1612586 - 1612068 - | hypothetical protein TERM 1953 1612530 - 1612549 + g 79 -10.8 -3.22951 | opp_overlap 1612518, overlap 1612529 AAACAACTGACGGGT TGATTGCC AAAA GGCAATCA TATTATACCCATCTA SPy_1938 1613336 - 1612590 - | putative tRNA/rRNA methyltransferase SPy_1939 1614180 - 1613383 - | hypothetical protein TERM 1954 1614378 - 1614355 - R 89 -9 -4.29738 | gap 1, opp_overlap 1614358 TCAGACCTATGAAAA TAAGAGTCTCC TAG GG-GACTCTTA TGAGGATATCAATTG SPy_1940 1614789 - 1614376 - | hypothetical protein cysS 1616125 - 1614782 - | cysteinyl-tRNA synthetase SPy_1942 1616383 - 1616153 - | hypothetical protein TERM 1955 1616425 - 1616407 - R 100 -11.8 -4.90266 | TTTATTAACGAAAAA CCTTCACA ACC TGTGAAGG CTTCAGAAAGTAGAC cysE 1617443 - 1616862 - | putative serine acetyltransferase SPy_1945 1618204 - 1617452 - | hypothetical protein pnpA 1620329 - 1618197 - | polynucleotide phosphorylase/polyadenylase TERM 1956 1620594 - 1620577 - R 93 -4.1 -6.0458 | opp_overlap 1620577 ACAAAGCAAAAAAAA GCAGG TTGGTATG CCTGC TTTCGTCTCCTAATA SPy_1947 1621341 - 1620610 - | putative translaldolase ulaA 1622729 - 1621494 - | ascorbate-specific PTS system enzyme IIC TERM 1957 1621626 - 1621610 - G 70 -8.7 -3.2827 | TTAGCGAAGCACCAA TCATCGC ACC GCGACGA CCACCTGTTGAATTT SPy_1950 1623040 - 1622756 - | hypothetical protein SPy_1952 1625093 - 1623033 - | hypothetical protein TERM 1958 1625251 - 1625264 + r 84 -6.7 -5.15167 | AAAATAGGCAAATCT GGGAA TTGA TTCCC TTTTTCTTCATGATA TERM 1959 1625280 - 1625317 + r 84 -11.5 -3.07113 | opp_overlap 1625280 1625283 1625288, overlap 1625283 TTTTTCTTCATGATA CAACAAAAGATACCTCA TCAC TGAGATACCTTTTGTTG TTAAATAAAATCATC TERM 1960 1625317 - 1625280 - R 100 -15.9 -2.78384 | opp_overlap 1625280 1625283, overlap 1625283 1625288 TTTTTCTTCATGATA CAACAAAAGATACCTCA TCAC TGAGATACCTTTTGTTG TTAAATAAAATCATC TERM 1961 1625283 - 1625314 + r 71 -7.4 -3.68073 | opp_overlap 1625280 1625283 1625288, overlap 1625280 TTCTTCATGATACAA CAAAAGATACCTCA TCAC TGAGATACCTTTTG TTGTTAAATAAAATC TERM 1962 1625314 - 1625283 - R 91 -11.8 -3.54475 | opp_overlap 1625283 1625280, overlap 1625280 1625288 TTCTTCATGATACAA CAAAAGATACCTCA TCAC TGAGATACCTTTTG TTGTTAAATAAAATC TERM 1963 1625309 - 1625288 - R 81 -5.9 -4.85918 | opp_overlap 1625283 1625280, overlap 1625283 1625280 CATGATACAACAAAA GATACCTCA TCAC TGAGATACC TTTTGTTGTTAAATA TERM 1964 1625429 - 1625408 - R 88 -7.9 -5.18355 | opp_overlap 1625408 1625410 GTCAAAAATGAAAAA GCCCACTGC ATAA GCAGAGGAC TTTTTAAACTTGAAA TERM 1965 1625408 - 1625429 + r 74 -5.7 -4.66833 | opp_overlap 1625408, overlap 1625410 GTCAAAAATGAAAAA GCCCACTGC ATAA GCAGAGGAC TTTTTAAACTTGAAA rpsO 1625714 - 1625445 - | 30S ribosomal protein S15 TERM 1966 1625551 - 1625568 + g 70 -5.5 -4.38219 | ATTTTTTTCATCAAT CCACGGT AAGT AGCGTGG TCTTTTTTGTGTTGT SPy_1956 1626027 - 1625872 - | hypothetical protein TERM 1967 1625899 - 1625912 + g 72 -4.5 -4.66163 | opp_overlap 1625892 1625899 ACTAGCAAGGCCAAA TAGCC AAGA GGCTG TTTTTAAATCAGAAT SPy_1957 1626153 - 1626422 + | hypothetical protein TERM 1968 1627117 - 1627098 - g 74 -5 -4.67904 | GATCAATGCTAAAAA CCCCTTTG AAAC CAAAGAAG AGCTCTTGATTTTAG def 1626523 - 1627137 + | peptide deformylase TERM 1969 1627138 - 1627165 + T 87 -11.5 -3.2794 | opp_overlap 1627138 1627146 TTGATTTTAGACTAA CAAAAAAAGGC CCTTTA GCCTTTTTTTG TTAGTCTAAATAGCC TERM 1970 1627165 - 1627138 - T 89 -12.2 -3.27022 | opp_overlap 1627138, overlap 1627146 TTGATTTTAGACTAA CAAAAAAAGGCC CTTT AGCCTTTTTTTG TTAGTCTAAATAGCC TERM 1971 1627157 - 1627146 - T 90 -3.6 -5.85737 | opp_overlap 1627138, overlap 1627138 AGACTAACAAAAAAA GGCC CTTT AGCC TTTTTTTGTTAGTCT SPy_1959 1627713 - 1627171 - | hypothetical protein SPy_1960 1628272 - 1627844 - | MarR family transcriptional regulator TERM 1972 1628112 - 1628091 - G 89 -10.3 -4.1673 | overlap 1628094 GAAGTCGCTAACAAA GAATCAATC AAGT GATTGATTC GCATACAGCCTTTAG TERM 1973 1628109 - 1628094 - G 71 -6.2 -4.20367 | overlap 1628091 GTCGCTAACAAAGAA TCAATC AAGT GATTGA TTCGCATACAGCCTT polC 1632779 - 1628382 - | DNA polymerase III PolC TERM 1974 1628951 - 1628973 + g 74 -6.3 -4.4009 | opp_overlap 1628954 TTTTTCCACACGATT CAATGTACC AGTCG GGCACATTG TTTTCTCGCATGGCA TERM 1975 1631297 - 1631277 - G 71 -6.9 -4.08945 | ACTATCTTTGCAAAA GTCCTGAAA AGC TTTTAGGAC AGTAACCAATGGCTT TERM 1976 1633021 - 1632997 - R 72 -5 -4.80882 | gap 1 AGTTCACAGCAAAAA GAGGCCACTCT AAAC AG-GCAGCCTC TTCATTTCTTTTTTA proS 1634890 - 1633034 - | prolyl-tRNA synthetase TERM 1977 1635005 - 1635038 + r 100 -12.6 -4.77986 | opp_overlap 1635005 TTTCATTTTGAGTAA GACCTCAACCCT TGCAAATCTT AGGGTTGAGGTC TTTTTCGATCTTTAA TERM 1978 1635038 - 1635005 - R 91 -12.6 -3.15544 | opp_overlap 1635005 TTTCATTTTGAGTAA GACCTCAACCCT TGCAAATCTT AGGGTTGAGGTC TTTTTCGATCTTTAA SPy_1963 1636347 - 1635088 - | may be involved in production of a peptide sex pheromone TERM 1979 1636300 - 1636283 - G 70 -5.6 -4.48449 | TTAGCAAAATAGAAA TGTCCA AATTCA TGGACA ATCACTAAAATACCA cdsA 1637214 - 1636420 - | putative phosphatidate cytidylyltransferase (CDP-diglyceride synthase) TERM 1980 1637083 - 1637063 - G 77 -7.7 -4.16146 | opp_overlap 1637062 1637063 AAAACACCTTCAAAA GAAAAGACT TCT AATCTTTTC ATTTTCAGTAATTCT uppS 1637976 - 1637227 - | putative undecaprenyl pyrophosphate synthetase TERM 1981 1637922 - 1637943 + g 100 -4.4 -5.9003 | opp_overlap 1637921, overlap 1637924 1637938 TGATAATTCCAATAT GCTTTGGG ATACTC CCCAAAAC TTTTTTTGTTGATTT TERM 1982 1638025 - 1638040 + r 79 -4.6 -5.31456 | TATTTTATCATATTT CACGCC TTTT GGCTTG TTTTTTATCAATTAG TERM 1983 1638184 - 1638163 - R 89 -3.1 -5.83211 | gap 1, opp_overlap 1638163, overlap 1638156 GATCAAAACAAAAAA GTTTGGCATA TTT CAT-CCAAAC TTTCCCCGCCTTAAT TERM 1984 1638211 - 1638229 + r 71 -8.8 -2.99545 | overlap 1638208 TAATGGCTTTCAATG GCACTGTC AGT GTCAGTGC TATCTACTGTCTCAA yajC 1638560 - 1638195 - | preprotein translocase subunit YajC TERM 1985 1638471 - 1638482 + g 72 -3.6 -5.08831 | GTTTAACTGATTTTG GCGT TCTT GCGC TTGTTTTTTTTGTTG SPy_1971 1639050 - 1638676 - | hypothetical protein TERM 1986 1638771 - 1638759 - G 72 -9.1 -3.35813 | GCTGATCGTAACTAA CCAGC AAA GCTGG AACTGTCACTAATTG pulA 1642662 - 1639165 - | putative pullulanase TERM 1987 1641035 - 1641046 + g 75 -5.8 -4.70626 | opp_overlap 1641033 1641035 GCTTCATAGATAATA GCGT CTTC ACGC TTTTTAAAGTTGTTA TERM 1988 1641114 - 1641125 + g 70 -5.8 -4.371 | overlap 1641113 TTGGATCAATAAAGG CAGC TTTT GCTG TTTTGATGTCATCAG TERM 1989 1642801 - 1642831 + r 74 -9.1 -3.06796 | gap 1, opp_overlap 1642796 1642801 1642810, overlap 1642803 1642809 ATCTCAAAAATTAAA CAGCCAAAACGAGT TTCC ACTCGCTT-GGCTG TTGGGTAAACTCAAA TERM 1990 1642831 - 1642801 - R 100 -11.3 -4.32649 | gap 1, opp_overlap 1642801 1642803 1642809, overlap 1642796 1642810 ATCTCAAAAATTAAA CAGCCAAAACGAGT TTCC ACTCGCTT-GGCTG TTGGGTAAACTCAAA TERM 1991 1642823 - 1642810 - R 74 -6.7 -4.32903 | opp_overlap 1642809 1642803 1642801, overlap 1642801 1642796 ATTAAACAGCCAAAA CGAGT TTCC ACTCG CTTGGCTGTTGGGTA dexB 1644473 - 1642860 - | dextran glucosidase TERM 1992 1644587 - 1644555 - R 90 -11.5 -3.54488 | opp_overlap 1644564, overlap 1644558 1644564 TTTGCGCAAATAACA TGATAAAAAGGCTGG AAC CCAACCTTTTTATGA ATATCGCTTATACCT TERM 1993 1644584 - 1644558 - R 87 -13.2 -2.90309 | opp_overlap 1644564, overlap 1644555 1644564 GCGCAAATAACATGA TAAAAAGGCTGG AAC CCAACCTTTTTA TGAATATCGCTTATA TERM 1994 1644578 - 1644564 - R 88 -7.8 -4.9934 | opp_overlap 1644564, overlap 1644558 1644555 ATAACATGATAAAAA GGCTGG AAC CCAACC TTTTTATGAATATCG TERM 1995 1644564 - 1644578 + r 77 -5.6 -4.89852 | opp_overlap 1644564 1644558 1644555 ATAACATGATAAAAA GGCTGG AAC CCAACC TTTTTATGAATATCG msmK 1645735 - 1644602 - | sugar ABC transporter ATP-binding protein TERM 1996 1646032 - 1646015 - R 76 -4.1 -5.1675 | CCAGGCAGCAAAAAA GAAAGCC CTGT GCCTTTC CTAATATTTCAACAA lrp 1646881 - 1646033 - | leucine-rich protein TERM 1997 1646511 - 1646526 + g 76 -9 -3.76125 | ATTGAGATTGCTTGT CGGCAT AAAA ATGCCG TTTGGGTTGCACTGA TERM 1998 1648234 - 1648215 - g 72 -8.6 -3.48024 | opp_overlap 1648213, overlap 1648213 GTTCACCATCAAATA CGTTGATG TCAA CACCAACG AATTGCTAAAAAGCG ska 1647241 - 1648563 + | streptokinase A precursor TERM 1999 1648633 - 1648604 - T 95 -8.7 -5.66684 | gap 1, opp_overlap 1648604 TAACTGACAAAAAAA GCAAGCAACACGCT ATC AACA-GTTGCTTGC TTTTTTCTAACCTCT TERM 2000 1648604 - 1648633 + T 80 -5.1 -5.26918 | opp_overlap 1648604 TAACTGACAAAAAAA GCAAGCAAC ACGCTATCAACA GTTGCTTGC TTTTTTCTAACCTCT SPy_1980 1649104 - 1648661 - | D-tyrosyl-tRNA deacylase relA 1651350 - 1649119 - | (p)ppGpp synthetase TERM 2001 1650951 - 1650970 + g 73 -7.2 -4.09739 | gap 1, opp_overlap 1650950 TATCTTTGGACATAG CCATCAGCA TTT TGC-GATGG TTTTCGGCGAGTTGC TERM 2002 1651550 - 1651525 - R 100 -12.7 -4.72272 | opp_overlap 1651520 1651525 GCTCCCGACCAAAAA TAGAGAGAACC AAGG GGCTCTCTCTA TTATGTTTGCTTATC TERM 2003 1651525 - 1651550 + r 93 -10.5 -3.91905 | opp_overlap 1651525, overlap 1651520 GCTCCCGACCAAAAA TAGAGAGAACC AAGG GGCTCTCTCTA TTATGTTTGCTTATC scl 1652636 - 1651590 - | collagen-like surface protei TERM 2004 1653270 - 1653300 + G 89 -11.8 -3.67597 | overlap 1653271 GGAGAGTTTATTGCT GCCCATGGCAACGC CCA GCGTTGTCTTGGGA TTATTGGCTCAGGCA TERM 2005 1653271 - 1653299 + G 95 -15.3 -2.80344 | overlap 1653270 GAGAGTTTATTGCTG CCCATGGCAACGC CCA GCGTTGTCTTGGG ATTATTGGCTCAGGC TERM 2006 1653360 - 1653374 + G 73 -8.6 -3.62275 | opp_overlap 1653359 1653356 1653354 ACAGCCAAACAGTAT GCCAAA CGC TTTGGC TTTCCACTGCTAGGT SPy_1984 1653018 - 1653500 + | hypothetical protein TERM 2007 1653766 - 1653811 + T 100 -24.4 -3.29273 | opp_overlap 1653770, overlap 1653770 GGTTACTGACATGAC TAAAGAGGTCTAACCAGCTC TACCTT GAGCTGGTTAGACCTCTTTG TGTTCTCCTAATCCC TERM 2008 1653807 - 1653770 - T 100 -23 -3.82218 | opp_overlap 1653766 1653770 ACTGACATGACTAAA GAGGTCTAACCAGCTC TACCTT GAGCTGGTTAGACCTC TTTGTGTTCTCCTAA TERM 2009 1653770 - 1653807 + T 100 -23 -4.29304 | opp_overlap 1653770, overlap 1653766 ACTGACATGACTAAA GAGGTCTAACCAGCTC TACCTT GAGCTGGTTAGACCTC TTTGTGTTCTCCTAA SPy_1985 1654712 - 1653894 - | hypothetical protein SPy_1986 1656981 - 1654795 - | PTS system, glucose-specific IIABC component TERM 2010 1657292 - 1657267 - R 90 -3.9 -5.87996 | GAAGCAATAAAAAAA GGCCGTTGACA CAAT CGTGAACTGCC TGTCCGTTTCTTTAG TERM 2011 1657320 - 1657341 + r 72 -5.9 -4.2828 | opp_overlap 1657323, overlap 1657323 TAGCCTCTTCTTTCT AAAGTAAGC AACA GCTTACTTA TTTTGATGCCTGCAA TERM 2012 1657323 - 1657338 + r 78 -7.6 -4.26327 | opp_overlap 1657323, overlap 1657320 CCTCTTCTTTCTAAA GTAAGC AACA GCTTAC TTATTTTGATGCCTG TERM 2013 1657338 - 1657323 - R 71 -7.6 -3.53012 | opp_overlap 1657323 1657320 CCTCTTCTTTCTAAA GTAAGC AACA GCTTAC TTATTTTGATGCCTG SPy_1987 1658088 - 1657339 - | hypothetical protein TERM 2014 1658038 - 1658050 + g 100 -6.3 -5.75599 | GATGGTATCTTTATC GGTAA TCG TTACC TTTTTTTCTGCTTTG prmA 1659041 - 1658088 - | ribosomal protein L11 methyltransferase TERM 2015 1658192 - 1658178 - G 70 -2.8 -5.06816 | overlap 1658180 AGTTTCTAAGAAAAA GCCT GCGCTAA AGGC AGCTTCCAGAACCAT SPy_1989 1659543 - 1659112 - | hypothetical protein TERM 2016 1659999 - 1660020 + G 73 -7.3 -4.13767 | opp_overlap 1659998 1660001 CCCATAATGACAGAC TAGGCAACG AGTA CCTTGCCTA TTTTACAGTGCACAA pabB 1659782 - 1661539 + | putative para-aminobenzoate synthetase TERM 2017 1661795 - 1661785 - g 79 -5.4 -4.93877 | TTTTACCAAACAAAA CCTA TCT TAGG AGTGTGTCTGGGACA trpG 1661572 - 1662138 + | anthranilate synthase component II SPy_1992 1662171 - 1663439 + | recombination factor protein RarA TERM 2018 1663830 - 1663817 - f 82 -5.3 -5.24989 | opp_overlap 1663817 CTATACATGAAAAAA CCTTT GTTT AAAGG CTTTTTTTGCTTGTC SPy_1994 1663936 - 1664376 + | pai1 protein (theoretical repressor) flaR 1664431 - 1664937 + | topology modulation protein TERM 2019 1664974 - 1664993 + F 72 -5.8 -4.42464 | gap 1, opp_overlap 1664957 1664991, overlap 1664991 ACCACGGGTAATCCG GGCTATTCA GAC TGAA-AGCC TTTGTTTAAAGGCTT TERM 2020 1664991 - 1665006 + F 93 -7.6 -5.4148 | opp_overlap 1664991, overlap 1664974 CTATTCAGACTGAAA GCCTTT GTTT AAAGGC TTTTTTGCTTGTTTC TERM 2021 1665006 - 1664991 - f 73 -7.6 -3.71873 | opp_overlap 1664974 1664991 CTATTCAGACTGAAA GCCTTT GTTT AAAGGC TTTTTTGCTTGTTTC smeZ 1665186 - 1665887 + | mitogenic exotoxin Z SPy_1999 1666437 - 1666171 - | hypothetical protein dppA 1666616 - 1668244 + | surface lipoprotein TERM 2022 1669152 - 1669164 + G 82 -7.7 -4.52047 | overlap 1669148 TTTGGAGGATCTGTT CTTGC TGA GCAAG TTTTCTCATATCCTG dppB 1668357 - 1669334 + | transmembrane transport protein TERM 2023 1669465 - 1669509 + G 80 -10.9 -3.3353 | opp_overlap 1669477, overlap 1669462 1669477 TTTACGCAACCTCGC TCCTTCCTTAAACCATCTTTT TGG GACAGATGGTTTAGGTAGGGA TATGTTTGTCAGAAC dppC 1669331 - 1670152 + | transmembrane transport protein dppD 1670164 - 1670967 + | ATPase protein dppE 1670951 - 1671577 + | ATPase protein TERM 2024 1671657 - 1671626 - T 83 -11.2 -2.77512 | gap 1, opp_overlap 1671627 1671635, overlap 1671635 AACAAAATCACACCA TTAAAAAAACCAGCT TAC AGCTGG-TTTTTTAA TTATTTTAATTTTTC TERM 2025 1671627 - 1671657 + T 100 -12.8 -4.47007 | opp_overlap 1671626 1671635, overlap 1671635 ACAAAATCACACCAT TAAAAAAACCAGCT TAC AGCTGGTTTTTTAA TTATTTTAATTTTTC TERM 2026 1671649 - 1671635 - T 100 -10 -5.56568 | opp_overlap 1671627 1671635, overlap 1671626 ACACCATTAAAAAAA CCAGCT TAC AGCTGG TTTTTTAATTATTTT TERM 2027 1671635 - 1671649 + T 100 -10 -5.43514 | opp_overlap 1671635 1671626, overlap 1671627 ACACCATTAAAAAAA CCAGCT TAC AGCTGG TTTTTTAATTATTTT SPy_2005 1671858 - 1671658 - | hypothetical protein TERM 2028 1671827 - 1671837 + g 71 -4 -4.86293 | CCACCAGATGCTTGC TCAA TTT TTGA TTTTAATTTTTCTTC SPy_2006 1674504 - 1672027 - | hypothetical protein TERM 2029 1673007 - 1673031 + g 75 -2.9 -5.33026 | overlap 1673008 TTGTTACTTTGCGAC TCACTTTTTTA GTG TCAAAGAGTGG TTTTTCTTTGCCTTG TERM 2030 1673747 - 1673763 + g 74 -6.5 -4.44608 | opp_overlap 1673746 GGGCGGTAATCAGAC GGTCTAG CAC CTCGACC TTGTTTTTGACTCCA TERM 2031 1674031 - 1674041 + g 73 -5.4 -4.62669 | overlap 1674036 AGTTCCTTTGGCTAC TTGC TCA GCAA TTTGTTGTTTGGTTC lmb 1675437 - 1674517 - | putative laminin adhesion TERM 2032 1674580 - 1674604 + g 79 -11.5 -2.65274 | overlap 1674579 TAGATATGTCTTGTT TCCGCTTGGAG CAG CTTCAAGTGGA CTTAATGTCTTTACT TERM 2033 1675070 - 1675095 + g 89 -10.5 -4.14392 | TCCATATCTTCTAGC CCTTTGACTCT ATCT AGTGTCAAAGG TTTTGACGCTTCAAA TERM 2034 1675115 - 1675125 + g 85 -4 -5.53288 | opp_overlap 1675115 GACGCTTCAAACACA TCAA CCT TTGA TTTTTTTAAATTAGG TERM 2035 1675642 - 1675616 - R 100 -16.8 -5.50499 | opp_overlap 1675616 1675606 1675604 1675618 1675620 1675622 GCACATCTAAAAAAA TAGAGAGAACCA AAT TGGTTCTCTCTA TTAAATAAGCTCTTA TERM 2036 1675616 - 1675642 + r 100 -16.8 -3.0792 | opp_overlap 1675616, overlap 1675606 1675604 1675618 1675620 1675622 GCACATCTAAAAAAA TAGAGAGAACCA AAT TGGTTCTCTCTA TTAAATAAGCTCTTA TERM 2037 1675618 - 1675640 + r 95 -15 -3.09505 | opp_overlap 1675616, overlap 1675616 1675606 1675604 1675620 1675622 ACATCTAAAAAAATA GAGAGAACCA AAT TGGTTCTCTC TATTAAATAAGCTCT TERM 2038 1675620 - 1675638 + r 85 -11.8 -3.10522 | opp_overlap 1675616, overlap 1675618 1675616 1675606 1675604 1675622 ATCTAAAAAAATAGA GAGAACCA AAT TGGTTCTC TCTATTAAATAAGCT TERM 2039 1675622 - 1675636 + r 71 -8.6 -3.11072 | opp_overlap 1675616, overlap 1675620 1675618 1675616 1675606 1675604 CTAAAAAAATAGAGA GAACCA AAT TGGTTC TCTCTATTAAATAAG SPy_2009 1676812 - 1675673 - | hypothetical protein TERM 2040 1675833 - 1675858 + g 93 -9.1 -5.24129 | overlap 1675854 GACAATGAGCGATTT GGAGAGTAAGA CTGT TCTTGCTCTTC TTTTTTATCAGAAGA scpA 1680454 - 1676909 - | C5A peptidase precursor TERM 2041 1677580 - 1677591 + g 70 -3.6 -5.00138 | TACGCTCACGGTAAA CCGG TTGG CTGG TTTTTGGTTTAGATG TERM 2042 1680527 - 1680506 - H 100 -11.7 -4.73613 | opp_overlap 1680510 TGACCATTAAGAAAA GAGAGAATC AAAC GATTCTCTC CTAGCTGTCCATCTG TERM 2043 1680790 - 1680769 - H 100 -13.1 -4.60797 | opp_overlap 1680771 1680773 CTTTTAGACATAAAA GAGAGAACC GATC GGTTCTCTC TTCAGACTGAAGACA TERM 2044 1680771 - 1680788 + H 77 -9.9 -3.04144 | opp_overlap 1680769, overlap 1680773 TTTAGACATAAAAGA GAGAACC GATC GGTTCTC TCTTCAGACTGAAGA TERM 2045 1680808 - 1680833 + H 81 -6.2 -5.00846 | CAGACTGAAGACAAA GTCCTTAGAA TCGCTT TTCTAGGGGC TTTTTATGATATTTA SPy_2013 1680888 - 1682093 + | IS1562 transposase TERM 2046 1682239 - 1682215 - T 100 -10.1 -5.38348 | opp_overlap 1682215 AAAAACACTAAAAAA GACAAACACCA AAT CGATGTTTGTC TTCAATCTGTTCTAG sic 1683598 - 1682672 - | inhibitor of complement-mediated lysis TERM 2047 1683754 - 1683733 - R 100 -13.1 -4.60797 | opp_overlap 1683733 CTTCTATACATAAAA GAGAGAACC GACT GGTTCTCTC TTGATGTTCACTCAG TERM 2048 1683733 - 1683754 + r 93 -13.1 -3.38072 | opp_overlap 1683733 CTTCTATACATAAAA GAGAGAACC GACT GGTTCTCTC TTGATGTTCACTCAG emm1 1685241 - 1683787 - | M protein type 1 TERM 2049 1684243 - 1684284 + g 86 -4.4 -5.38549 | gap 1 TTCACGTGATGCGTC CAAGTCAC-GGCGAAGGCC TTGAC GGCTTGCGTCTGAGATTTG TTTTTCTTCTTTAAC TERM 2050 1685205 - 1685230 + g 74 -4.9 -4.67168 | gap 1, overlap 1685209 CTGTTTTTAATTTTC TAA-GCGAATAG TGT CTATTCGTGTTA TTTTTAGCCATTTTT TERM 2051 1685209 - 1685225 + g 83 -9.5 -3.80746 | overlap 1685205 TTTTAATTTTCTAAG CGAATAG TGT CTATTCG TGTTATTTTTAGCCA mga 1687015 - 1685426 - | M protein trans-acting positive regulator TERM 2052 1685899 - 1685911 + g 70 -3.4 -4.84359 | TGATAGGTTCTTTCT CTGA ACGCA TCAG TTTTTCTACACCTGC TERM 2053 1686922 - 1686944 + g 93 -9.8 -4.69326 | overlap 1686924 TGCTGAGTTCTTTAT CTTTGACGCC AAT GGCGTCAGCG TTTTCTGTTACGTAT TERM 2054 1686924 - 1686942 + g 76 -11 -2.63584 | overlap 1686922 CTGAGTTCTTTATCT TTGACGCC AAT GGCGTCAG CGTTTTCTGTTACGT TERM 2055 1687635 - 1687672 + r 71 -8.7 -2.97146 | opp_overlap 1687635, overlap 1687634 CAAAAGACCAAAAAA CTTCCAATAACTTAG CTCGTGCT CTAAATTATTGGAAG ATTATTTGACCTATT TERM 2056 1687672 - 1687635 - R 100 -10.9 -5.36314 | opp_overlap 1687635 1687634 CAAAAGACCAAAAAA CTTCCAATAACTTAG CTCGTGCT CTAAATTATTGGAAG ATTATTTGACCTATT SPy_2023 1687942 - 1687691 - | hypothetical protein isp 1689646 - 1688021 - | immunogenic secreted protein precursor TERM 2057 1688592 - 1688605 + g 84 -2.3 -5.72207 | ATCAAGGTATCCAAC TGGCC TAGT GACCA TTTTTTTGCTTTGAG SPy_2026 1691136 - 1689748 - | putative histidine kinase SPy_2027 1691786 - 1691133 - | putative two-component response regulator TERM 2058 1691177 - 1691194 + g 89 -5.5 -5.40474 | TGCCTGTAATTGTCT TGAGGGG AATA CCCGTCA TTTTTTTACGAAGGT TERM 2059 1691830 - 1691851 + r 81 -5.9 -4.89729 | gap 1, opp_overlap 1691830, overlap 1691838 GTATCAAGCAGCTAA GGATGACATC AAA GG-GTCATCC TTTTTGACTTTTATG SPy_2029 1693097 - 1691880 - | ABC transporter permease TERM 2060 1692136 - 1692146 + g 88 -8.2 -5.14965 | ATAAGCTTACGTCTA GCGC CAA GCGC TTTTTTGATCCCAAT SPy_2031 1693784 - 1693110 - | ABC transporter ATP-binding protein TERM 2061 1693418 - 1693436 + g 72 -3.1 -5.01732 | gap 1, overlap 1693423 GCTTTAACATCTCTA GGGC-TCG TTTG CGACGCTC TTTTTTAGGAACATT SPy_2032 1695039 - 1693771 - | putative ATP-binding cassette transporter-like protein TERM 2062 1694127 - 1694142 + g 70 -3.2 -4.85177 | GGTCATTGCCACCTT GGCC TTGACCTT GGCC TTTTTCCTCTGCTTT TERM 2063 1695333 - 1695296 - R 76 -2.8 -5.45802 | opp_overlap 1695296 1695291 TTTGGAAAACAAAAA TCATATAACCGTTC GCTCACATAA GCACGGGTATATGA TTTTGTACATTTGCG SPy_2033 1695866 - 1695462 - | hypothetical protein SPy_2034 1696189 - 1695893 - | hypothetical protein TERM 2064 1696350 - 1696360 + r 70 -4 -4.98255 | TTGTTTTGTGACCTT GATT TTT AATC TTTTTCTCCTTAAAA TERM 2065 1696654 - 1696696 + r 71 -8.7 -3.02829 | gap 2, overlap 1696657 CTGGTACTGGGGGTA TAGTCAGATTGGGTAGTTAGA GTT TCTGACT-CCCAATCAG-CTA TGTTAACGGACTATC TERM 2066 1696761 - 1696720 - R 90 -11.8 -3.38272 | opp_overlap 1696722, overlap 1696722 GACTATCACTGATAA CATTCACGCTAAGCCT CATTCTAGCT AGGCTTAGCGTGAATT TTTTTTGCTGACTGG TERM 2067 1696759 - 1696722 - R 95 -14.4 -3.25896 | opp_overlap 1696722, overlap 1696720 CTATCACTGATAACA TTCACGCTAAGCCT CATTCTAGCT AGGCTTAGCGTGAA TTTTTTTTGCTGACT TERM 2068 1696722 - 1696759 + r 100 -14.4 -5.86965 | opp_overlap 1696722 1696720 CTATCACTGATAACA TTCACGCTAAGCCT CATTCTAGCT AGGCTTAGCGTGAA TTTTTTTTGCTGACT TERM 2069 1696786 - 1696823 + r 93 -10.8 -3.92522 | opp_overlap 1696787 1696788 1696792, overlap 1696776 1696787 1696792 GACTGGTTTTTAAAT ATTAAAGACTCTATCC TTATTT GGATAGAGTCTTTAGC TTTATGACATTGCCC TERM 2070 1696822 - 1696787 - R 90 -12.1 -3.34517 | opp_overlap 1696776 1696786 1696787 1696792, overlap 1696788 1696792 ACTGGTTTTTAAATA TTAAAGACTCTATCC TTATTT GGATAGAGTCTTTAG CTTTATGACATTGCC TERM 2071 1696787 - 1696822 + r 93 -14.3 -2.95192 | opp_overlap 1696787 1696788 1696792, overlap 1696776 1696786 1696792 ACTGGTTTTTAAATA TTAAAGACTCTATCC TTATTT GGATAGAGTCTTTAG CTTTATGACATTGCC TERM 2072 1696821 - 1696788 - R 100 -15.6 -2.60496 | opp_overlap 1696776 1696787 1696786 1696792, overlap 1696787 1696792 CTGGTTTTTAAATAT TAAAGACTCTATCC TTATTT GGATAGAGTCTTTA GCTTTATGACATTGC TERM 2073 1696817 - 1696792 - R 95 -12 -4.00532 | opp_overlap 1696776 1696787 1696786 1696792, overlap 1696788 1696787 TTTTTAAATATTAAA GACTCTATCC TTATTT GGATAGAGTC TTTAGCTTTATGACA TERM 2074 1696792 - 1696817 + r 91 -12 -3.89215 | opp_overlap 1696792 1696788 1696787, overlap 1696776 1696787 1696786 TTTTTAAATATTAAA GACTCTATCC TTATTT GGATAGAGTC TTTAGCTTTATGACA prsA 1697874 - 1696945 - | foldase protein PrsA TERM 2075 1698161 - 1698115 - R 71 -5.3 -4.64144 | gap 1, opp_overlap 1698123, overlap 1698123 AATAACTCTCAAAAA TCGTAAAAGGACTGAGTCCCAT CTCT ACAGAACTCAGTCC-TTTACCT TGGCATCTTAGGGAA TERM 2076 1698154 - 1698123 - R 100 -12.4 -4.31329 | opp_overlap 1698123, overlap 1698115 TCAAAAATCGTAAAA GGACTGAGTCCCAT CTCT ACAGAACTCAGTCC TTTACCTTGGCATCT speB 1699857 - 1698661 - | pyrogenic exotoxin B SPy_2040 1700299 - 1700129 - | hypothetical protein SPy_2041 1700383 - 1700514 + | hypothetical protein TERM 2077 1701369 - 1701380 + G 70 -3 -5.09762 | CGATTCGGATGTTTG TCAA TATG TTGA TTTTGTTTATTCAGC ropB 1700798 - 1701640 + | putative transcription regulator TERM 2078 1701654 - 1701676 + T 84 -6.3 -5.02715 | opp_overlap 1701654 GAGGCTCTTTAAAAA GCTAACGCT CTTAT GGTGTTAGC TTTTTGATTTGGTAT TERM 2079 1701774 - 1701793 + T 83 -6.5 -5.02201 | opp_overlap 1701766 1701774, overlap 1701768 GACAAATCATAAAAA GCAATGA CGACAA TCATTGC TTTTTCTAGTATTTT TERM 2080 1701793 - 1701774 - T 88 -7.2 -5.06735 | opp_overlap 1701774 1701768, overlap 1701766 GACAAATCATAAAAA GCAATGAC GACA ATCATTGC TTTTTCTAGTATTTT mf 1702696 - 1701881 - | mitogenic factor TERM 2081 1702584 - 1702642 + g 73 -6.8 -4.25104 | CGTGCCAGTGCAGTA TTTTCAAGTGTGACTGTTGTTACAGCCA TTG TGGCTGATACAAGAGCTACCATTGAAAA TTTTACTAGCCGACA SPy_2045 1703060 - 1703569 + | protein low temperature requirement C TERM 2082 1703609 - 1703571 - T 100 -17 -3.01329 | opp_overlap 1703576, overlap 1703576 CCAACCAACAATAAG CAAAACAAGTCTAGGAAG TGA CTCCCTAGACTTGTTTTT TTGAGGTTATCTGGC TERM 2083 1703576 - 1703604 + T 100 -14.7 -5.48303 | opp_overlap 1703576 1703571 CAACAATAAGCAAAA CAAGTCTAGGAAG TGA CTCCCTAGACTTG TTTTTTTGAGGTTAT TERM 2084 1703604 - 1703576 - T 100 -16.9 -4.61824 | opp_overlap 1703576, overlap 1703571 CAACAATAAGCAAAA CAAGTCTAGGAAG TGA CTCCCTAGACTTG TTTTTTTGAGGTTAT gldA 1704739 - 1703651 - | glycerol dehydrogenase TERM 2085 1703980 - 1703966 - G 72 -8.6 -3.54424 | TGTCAGCGCTGTAAA GCCATT GTG AATGGC ATGTGCAGCAGCCAG mipB 1705464 - 1704796 - | fructose-6-phosphate aldolase pflD 1707894 - 1705477 - | putative pyruvate formate-lyase 2 TERM 2086 1705766 - 1705788 + g 70 -7.8 -3.68529 | opp_overlap 1705787, overlap 1705754 CCTCCGACAATCTCA TCTGTTGGTA ATT TAGCAACAGA TTTCAATACTGAAGT TERM 2087 1706385 - 1706406 + g 77 -6.5 -4.5774 | TGCGGGTAATTTCGC GCAGGGTGG CATC CCATGCTGC TTTTAATTCTTCATA TERM 2088 1708078 - 1708059 - R 77 -5.7 -5.00616 | TCTTTTTCTAAAAAA CCACCTC TAACTG GAGATGG TCTCAAGAATTTGGT SPy_2050 1709408 - 1708104 - | PTS system, cellobiose-specific IIC component SPy_2051 1709726 - 1709418 - | PTS system, cellobiose-specific IIB component SPy_2052 1710074 - 1709754 - | PTS system, cellobiose-specific IIA component TERM 2089 1710328 - 1710306 - R 93 -5.5 -5.99154 | gap 1, opp_overlap 1710319 CATCAAACAAAAAAA GCCC-TGACC GTTT GGTCTTGGGC CTCTATAAATATCAT SPy_2053 1711342 - 1710362 - | putative transcriptional regulator SPy_2054 1712104 - 1711358 - | putative transcriptional regulator TERM 2090 1711618 - 1711585 - G 70 -8.4 -3.32997 | gap 1, overlap 1711587 TGCCCATAAAGCCAA GATCTTTGTTGAAAC CGTCT GTTCCAACAAAGA-C ACGATTGACATGAAA TERM 2091 1711617 - 1711587 - G 83 -12.1 -3.23047 | overlap 1711585 CCCATAAAGCCAAGA TCTTTGTTGAAAC CGTCT GTTCCAACAAAGA CACGATTGACATGAA SPy_2055 1712230 - 1713003 + | putative pyruvate formate-lyase activating enzyme TERM 2092 1713197 - 1713178 - T 100 -13.6 -5.34555 | opp_overlap 1713174 TGATACTACAAAAAA GGCTGGGA ATAC TCCCAGCC TAGGCTTTTCCAAGC secE 1713416 - 1713240 - | preprotein translocase subunit SecE TERM 2093 1713459 - 1713477 + r 76 -6.8 -4.59982 | TGTGTAAGGTATATG TTTTGCAG TAT TTGCAAAA TTTATTTACTTCTAG pbp2A 1715967 - 1713631 - | penicillin-binding protein 2a TERM 2094 1714976 - 1714986 + g 70 -3.2 -4.9138 | AGCCCTACTGCTCTA GCTT GCT GAGC TTTTGTTTGGGTAAT TERM 2095 1715876 - 1715888 + g 76 -3.3 -5.18357 | overlap 1715877 TTTTGATTGTGTTGT GGCGT TAA ACGCG TTTTTTGATGCATTA SPy_2060 1716386 - 1716006 - | hypothetical protein SPy_2063 1717145 - 1717963 + | hypothetical protein TERM 2096 1717982 - 1717942 - T 100 -14.9 -3.57792 | opp_overlap 1717944 1717951, overlap 1717943 1717951 TGACGCAGTCTTAAA CGCTCAAAAGGCTAGGAAA TAA TCTCCTAGCCTTTTGAGTT TATCTGTTTTCATAG TERM 2097 1717981 - 1717943 - T 100 -18.4 -2.74461 | opp_overlap 1717944 1717951, overlap 1717942 1717951 GACGCAGTCTTAAAC GCTCAAAAGGCTAGGAAA TAA TCTCCTAGCCTTTTGAGT TTATCTGTTTTCATA TERM 2098 1717944 - 1717980 + T 100 -19.7 -4.34859 | opp_overlap 1717943 1717942 1717951, overlap 1717951 ACGCAGTCTTAAACG CTCAAAAGGCTAGGAAA TAA TCTCCTAGCCTTTTGAG TTTATCTGTTTTCAT TERM 2099 1717951 - 1717973 + T 100 -10.6 -4.41177 | opp_overlap 1717943 1717942 1717951, overlap 1717944 CTTAAACGCTCAAAA GGCTAGGAAA TAA TCTCCTAGCC TTTTGAGTTTATCTG TERM 2100 1717973 - 1717951 - T 100 -12.8 -4.17089 | opp_overlap 1717951 1717944, overlap 1717943 1717942 CTTAAACGCTCAAAA GGCTAGGAAA TAA TCTCCTAGCC TTTTGAGTTTATCTG SPy_2065 1719776 - 1718052 - | hypothetical protein SPy_2066 1719939 - 1721435 + | putative dipeptidase TERM 2101 1721525 - 1721499 - T 100 -13.2 -5.15969 | opp_overlap 1721502 GCTGAAGTCAAAAAA TAAGGTCTCACA CTT TGTGAAACCTTA TCGGTATAGGAGGGG TERM 2102 1721502 - 1721522 + T 72 -8.3 -3.39327 | opp_overlap 1721499 GAAGTCAAAAAATAA GGTCTCACA CTT TGTGAAACC TTATCGGTATAGGAG TERM 2103 1722341 - 1722358 + T 71 -3.5 -5.08169 | gap 1 CTTTTAATCGTAATC CCTTT-GA TTC TCTAAAGG TTTTTTAAAATCTCT TERM 2104 1722480 - 1722459 - T 84 -5.3 -5.40464 | overlap 1722453 CATGACAAAGAAAAA CAATGTATT TTCC AATACATTA AAAGTCTGTAACCAC TERM 2105 1722526 - 1722568 + T 77 -5 -5.1861 | opp_overlap 1722529, overlap 1722529 ATATCACAACTAAAA AAACAAAGATGGGATATC ATGAGTC GAAATCCAATCTTTGTTC TTTTTTCATAGTAAG TERM 2106 1722565 - 1722529 - T 93 -7.4 -5.68023 | opp_overlap 1722529 1722526 TCACAACTAAAAAAA CAAAGATGGGATATCA TGAGT CGAAATCCAATCTTTG TTCTTTTTTCATAGT TERM 2107 1722529 - 1722565 + T 80 -6.7 -4.68456 | opp_overlap 1722529, overlap 1722526 TCACAACTAAAAAAA CAAAGATGGGATATC ATGAGTC GAAATCCAATCTTTG TTCTTTTTTCATAGT groEL 1724269 - 1722638 - | chaperonin GroEL TERM 2108 1723888 - 1723905 + g 70 -9.9 -2.6462 | overlap 1723869 1723887 1723885 1723891 TGGCTTTCAAGGCTT CAACAGC TGTT GCTGTTG CTGTTTCAATGCCTC groES 1724595 - 1724305 - | co-chaperonin GroES TERM 2109 1724626 - 1724662 + r 77 -9 -3.59658 | gap 1, opp_overlap 1724620 1724630, overlap 1724630 TAAAAGAATCTTTAG TAAAGTTAGCACTC-AT GTTC ATCGAGGGCTAACTTTA TATTCTATTTTATCA TERM 2110 1724704 - 1724729 + r 82 -4.1 -5.52986 | opp_overlap 1724704, overlap 1724707 ATAGTCAAGAAAAAA GAAGTTATTTT TGTA AGAATAACCTC TTTTTTTGGTGACAT TERM 2111 1724729 - 1724704 - R 82 -4.1 -5.49234 | opp_overlap 1724704 1724707 ATAGTCAAGAAAAAA GAAGTTATTTT TGTA AGAATAACCTC TTTTTTTGGTGACAT clpC 1727217 - 1724773 - | putative endopeptidase Clp ATP-binding chain C TERM 2112 1725887 - 1725897 + g 81 -5.4 -5.04987 | ATTGGTGTTAAAGTC TCAG GTG CTGA TTTTTTCACCATGTT ctsR 1727678 - 1727217 - | putative transcriptional regulator TERM 2113 1727849 - 1727826 - R 93 -7.4 -5.42514 | opp_overlap 1727826 GTAGAAATCAAAAAA GCAGTTGCTG TTTC CAACATCTGC TTCTCTTTAGTTACT csp 1728077 - 1727874 - | putative cold shock protein TERM 2114 1728305 - 1728282 - H 73 -7.5 -3.76125 | overlap 1728285 CTATGGTAAGGTAAA CAAGTAGAG ATTCAA CTCTACTCG CTCTCACATCACCGT TERM 2115 1728579 - 1728543 - H 88 -6 -5.75538 | gap 1, opp_overlap 1728542 1728543, overlap 1728537 CGCAAAAAATAAAAA CCTTGATTTAACAACGT TTTC ACGAAGTTAA-TCAAGG CTTGTTTTGTATATA ahpC 1729073 - 1729633 + | putative alkyl hydroperoxidase nox1 1729654 - 1731186 + | putative NADH oxidase/alkyl hydroperoxidase reductase TERM 2116 1731203 - 1731230 + T 100 -13.6 -5.32608 | opp_overlap 1731203 ACAGCATATTTAAAA GAAGTTTTGAGC TAAC GCTCAAAGCTTC TTTTTTAAATTTTTT TERM 2117 1731230 - 1731203 - T 100 -11.4 -4.2535 | opp_overlap 1731203 ACAGCATATTTAAAA GAAGTTTTGAGC TAAC GCTCAAAGCTTC TTTTTTAAATTTTTT TERM 2118 1731261 - 1731279 + T 89 -7.4 -5.27923 | opp_overlap 1731254 AAAGAATACGACCTC GGTCAACT GTG AGTTGTCC TTTTTTATAGACTTG hutI 1732530 - 1731244 - | imidazolonepropionase TERM 2119 1732583 - 1732599 + H 70 -7.3 -3.72695 | opp_overlap 1732583 CTCACCCACTCAATA GTTGCGA TCT TTGCAAC TTTGGTAACAACAAT TERM 2120 1733469 - 1733481 + G 70 -7.7 -3.76379 | opp_overlap 1733468 1733469 TGGCCCACAAGGAAT CGTTC ATG GAACG TTTAATACCCTCTTA hutU 1732801 - 1734831 + | urocanate hydratase SPy_2083 1734920 - 1735819 + | glutamate formiminotransferase SPy_2084 1735830 - 1736456 + | formiminotetrahydrofolate cyclodeaminase fhs.2 1736474 - 1738147 + | formate--tetrahydrofolate ligase TERM 2121 1738287 - 1738276 - g 74 -4.4 -4.95155 | opp_overlap 1738276, overlap 1738270 TGGAGATTACAAAAA GAGA GAAT TCTC TTATCGTCTCTCAAC TERM 2122 1738750 - 1738710 - g 71 -7.6 -3.90112 | gap 1, opp_overlap 1738714 1738715 1738745, overlap 1738713 TTTGCCTCAATCAAA CAAGCCCCGCCCAAACTCC AGTA GCTGTTTGGGCAGG-CTTA TGGTATAAGACTTAG TERM 2123 1738747 - 1738713 - g 73 -7.1 -4.0825 | gap 1, opp_overlap 1738714 1738715 1738745, overlap 1738710 GCCTCAATCAAACAA GCCCCGCCCAAACTCC AGTA GCTGTTTGGGCAGG-C TTATGGTATAAGACT SPy_2087 1738169 - 1738765 + | hypothetical protein SPy_2088 1738985 - 1740328 + | putative cationic amino acid transporter protein TERM 2124 1741106 - 1741084 - g 71 -7.6 -3.86346 | CCATTCGCCCACAAA GCGGCCAGTT GGC AACAGCCCGC AATATCCGAAACCTC hutH 1740339 - 1741880 + | histidine ammonia-lyase TERM 2125 1741906 - 1741931 + F 71 -7.5 -3.61178 | ACTTCTTTAACTAGA GGGGCTGTGGC AGAG GTCATGGCCTC TTTAGACTAACTAAC hutG 1742066 - 1743052 + | formimidoylglutamase TERM 2126 1743076 - 1743055 - T 100 -10.2 -4.28977 | opp_overlap 1743055 ACAACATAGCTAAAA CCCTCTGA TTCACT TCAGAGGG TTTTCCTTAGCTTTT TERM 2127 1743055 - 1743076 + T 100 -10.2 -4.48175 | opp_overlap 1743055 ACAACATAGCTAAAA CCCTCTGA TTCACT TCAGAGGG TTTTCCTTAGCTTTT SPy_2091 1746157 - 1743083 - | putative regulatory protein TERM 2128 1743720 - 1743740 + g 73 -8.3 -3.6502 | opp_overlap 1743727 AAGTCAATCGACTGT TGAAGCAGA CGC TCTGCCTCA TTTAACTCCCCAATA TERM 2129 1746701 - 1746683 - g 74 -3.9 -5.14563 | gap 1, opp_overlap 1746687, overlap 1746687 1746698 GTTGGTACTAAAAAA CAAGCTGC TGAA GCAG-TTG CTGACGAAGCAACGC TERM 2130 1746869 - 1746857 - g 71 -6.3 -4.15044 | GTTCTTCCTAAGAAA GAAGT TGC ACTTC TTAACAAACAACGCG TERM 2131 1747007 - 1746995 - g 76 -3.3 -5.23016 | opp_overlap 1747004 AAAGAAGCTAAAAAA CTTGG TAT CCCAG TCGTAGCGATGGTTG rpsB 1746461 - 1747228 + | 30S ribosomal protein S2 tsf 1747362 - 1748402 + | elongation factor Ts TERM 2132 1748430 - 1748455 + T 89 -7.6 -5.24796 | opp_overlap 1748430 1748432 GATAAGTCTAAAAAA GGCAACCTTC TTTCCT GAGGGTTGTC TTTTTGTTGTGTCAA TERM 2133 1748455 - 1748430 - T 71 -3.2 -5.11033 | opp_overlap 1748430, overlap 1748432 GATAAGTCTAAAAAA GGCAACCTTC TTTCCT GAGGGTTGTC TTTTTGTTGTGTCAA TERM 2134 1748495 - 1748525 + T 77 -5.4 -4.91109 | opp_overlap 1748498, overlap 1748496 1748498 CAATAAGGAAGCAAA AAACTGATCCTGTG TTT CACAGAATCAGTCA TTTTTATAATCACAG TERM 2135 1748496 - 1748524 + T 77 -8.9 -3.54183 | opp_overlap 1748498, overlap 1748495 1748498 AATAAGGAAGCAAAA AACTGATCCTGTG TTT CACAGAATCAGTC ATTTTTATAATCACA TERM 2136 1748522 - 1748498 - T 100 -13.7 -5.32565 | opp_overlap 1748496 1748495 1748498 TAAGGAAGCAAAAAA CTGATCCTGTG TTT CACAGAATCAG TCATTTTTATAATCA TERM 2137 1748498 - 1748522 + T 89 -11.5 -3.34102 | opp_overlap 1748498, overlap 1748496 1748495 TAAGGAAGCAAAAAA CTGATCCTGTG TTT CACAGAATCAG TCATTTTTATAATCA pepO 1750463 - 1748568 - | putative endopeptidase O TERM 2138 1749729 - 1749715 - G 77 -6.4 -4.57341 | overlap 1749716 AATTCTGTCCAAAAA CGTTCC TCA GGAACA ATAACCTTGTCAGGT TERM 2139 1750639 - 1750669 + r 86 -12.7 -2.6675 | opp_overlap 1750644, overlap 1750644 TTTCGTGACAATCAG CAAAAGCCTGAGG CCTAA CCTCAGGCTTTTA GTTAGTTATCAGCTA TERM 2140 1750664 - 1750644 - R 100 -13.3 -4.37527 | opp_overlap 1750639 1750644 TGACAATCAGCAAAA GCCTGAGGC CTA ACCTCAGGC TTTTAGTTAGTTATC TERM 2141 1750644 - 1750664 + r 100 -12.6 -4.51197 | opp_overlap 1750644, overlap 1750639 TGACAATCAGCAAAA GCCTGAGG CCTAA CCTCAGGC TTTTAGTTAGTTATC dexS 1752299 - 1750671 - | putative dextran glucosidase TERM 2142 1752320 - 1752349 + r 83 -7.9 -4.70583 | opp_overlap 1752320 1752318 1752321, overlap 1752321 1752322 TTCCTCCCTAAAATA GTTTCAGGAACTG ATCT CAGTTCCTGAACG TTTTCTCTTAGTAAA TERM 2143 1752348 - 1752320 - R 90 -11.2 -3.63744 | gap 1, opp_overlap 1752320 1752321 1752322, overlap 1752318 1752321 TTCCTCCCTAAAATA GTTTCAGGAACTG ATCT CAGTTCCTGAA-C GTTTTCTCTTAGTAA TERM 2144 1752348 - 1752321 - R 83 -11.4 -2.78032 | opp_overlap 1752320 1752321 1752322, overlap 1752320 1752318 TCCTCCCTAAAATAG TTTCAGGAACTG ATCT CAGTTCCTGAAC GTTTTCTCTTAGTAA TERM 2145 1752321 - 1752348 + r 89 -11.4 -3.41627 | opp_overlap 1752320 1752321 1752318, overlap 1752320 1752322 TCCTCCCTAAAATAG TTTCAGGAACTG ATCT CAGTTCCTGAAC GTTTTCTCTTAGTAA TERM 2146 1752322 - 1752347 + r 95 -14.9 -2.64253 | opp_overlap 1752320 1752321 1752318, overlap 1752321 1752320 CCTCCCTAAAATAGT TTCAGGAACTG ATCT CAGTTCCTGAA CGTTTTCTCTTAGTA SPy_2097 1754390 - 1752366 - | putative PTS system enzyme II SPy_2099 1754601 - 1755314 + | GntR family transcriptional regulator TERM 2147 1755320 - 1755354 + F 95 -8.9 -5.12068 | gap 2, opp_overlap 1755327, overlap 1755323 1755327 ACCAAAATAAAGACA GAAAA--AAGCCTTGCA AAA TGCAAGGCTTGCTTTTC TTTTTCTTGACTCTG TERM 2148 1755323 - 1755349 + F 93 -8 -5.42605 | opp_overlap 1755327, overlap 1755320 1755327 AAAATAAAGACAGAA AAAAGCCTTGCA AAA TGCAAGGCTTGC TTTTCTTTTTCTTGA TERM 2149 1755327 - 1755345 + F 100 -13.2 -3.96867 | opp_overlap 1755327, overlap 1755323 1755320 TAAAGACAGAAAAAA GCCTTGCA AAA TGCAAGGC TTGCTTTTCTTTTTC TERM 2150 1755345 - 1755327 - f 100 -13.2 -5.51046 | opp_overlap 1755323 1755320 1755327 TAAAGACAGAAAAAA GCCTTGCA AAA TGCAAGGC TTGCTTTTCTTTTTC TERM 2151 1755526 - 1755536 + F 73 -4 -5.02476 | AAACTGTAAAGAATG TGAT AAT ATCA TTTTTTAAAAACTCT TERM 2152 1756805 - 1756793 - g 79 -4.8 -5.0538 | overlap 1756799 CCTTACCTCAAAAAA CACC AAGAA GGTG CTCCAGGCTTAGCCT SPy_2103 1756118 - 1756975 + | hypothetical protein TERM 2153 1757072 - 1757051 - g 72 -4.5 -4.68655 | gap 1, overlap 1757055 CAACCGCAAAAGAAA TGACGATCCC TAA GGAATC-TCA CCCACACCTCCTTCC TERM 2154 1757195 - 1757185 - g 79 -6.8 -4.64763 | TCAGCTAAAAAAGAA CAGC AAC GCTG GCAAGACATGGCCTC TERM 2155 1757616 - 1757604 - g 72 -3.3 -5.06451 | opp_overlap 1757604 1757605, overlap 1757605 CACCATTTCAAAAAA GGCAC GAG GTGCA TTTCTCACTGCCTGT SPy_2104 1757017 - 1757748 + | hypothetical protein TERM 2156 1757733 - 1757761 + T 82 -9.8 -3.68725 | gap 1, opp_overlap 1757740, overlap 1757733 1757740 TGAATTTGTCTATAT C-AAAAAAGAGGC CTAG GCCTCTTTTTTAG TCTTTATTCACAATT TERM 2157 1757733 - 1757760 + T 76 -10 -2.80512 | opp_overlap 1757740, overlap 1757733 1757740 TGAATTTGTCTATAT CAAAAAAGAGGC CTAG GCCTCTTTTTTA GTCTTTATTCACAAT TERM 2158 1757753 - 1757740 - T 90 -8.1 -5.21709 | opp_overlap 1757740 1757733 1757733 GTCTATATCAAAAAA GAGGC CTAG GCCTC TTTTTTAGTCTTTAT TERM 2159 1757740 - 1757753 + T 90 -8.1 -5.34055 | opp_overlap 1757740, overlap 1757733 1757733 GTCTATATCAAAAAA GAGGC CTAG GCCTC TTTTTTAGTCTTTAT nrdG 1758536 - 1757922 - | putative anaerobic ribonucleotide reductase activator SPy_2106 1759045 - 1758536 - | hypothetical protein SPy_2107 1759989 - 1759054 - | putative oxidoreductase TERM 2160 1759107 - 1759095 - G 77 -7.7 -4.30987 | opp_overlap 1759091 ACTCTCCATAAGAAA GCTGA GAG TCAGC AATCTGTTGACAAAT TERM 2161 1759641 - 1759654 + g 77 -5.3 -4.90778 | opp_overlap 1759633 TGTTAAATCCTGCCA TCAGA AAAG TCTGA TTTTCTTTGGCTAAG TERM 2162 1760301 - 1760271 - R 93 -10.7 -4.06533 | opp_overlap 1760276, overlap 1760276 GAAACCATTAAACAA TAAAAGATTGCTT GCATG AAGCAACCTTTTA AGCATATCATATTTC TERM 2163 1760296 - 1760276 - R 83 -6.2 -5.02606 | opp_overlap 1760276, overlap 1760271 CATTAAACAATAAAA GATTGCTT GCATG AAGCAACC TTTTAAGCATATCAT nrdD 1762544 - 1760346 - | anaerobic ribonucleoside triphosphate reductase TERM 2164 1760632 - 1760646 + g 71 -5 -4.63218 | overlap 1760629 TAGTCCCAAACCGCT TCCAAG GCC TTTGGA TTTTGTTGCAAAACA TERM 2165 1762590 - 1762633 + r 73 -8.5 -3.19808 | gap 1, opp_overlap 1762590, overlap 1762588 1762594 CGACAACTAAAAAAA TCAATATATTGTGT-CAAGT TTTTT GCTCGAACACAATATATTGA TATTAAATTACTTTT TERM 2166 1762633 - 1762590 - R 100 -10 -5.68023 | gap 1, opp_overlap 1762588 1762590 1762594 CGACAACTAAAAAAA TCAATATATTGTG-TCAAG TTTTTTG CTCGAACACAATATATTGA TATTAAATTACTTTT SPy_2111 1764200 - 1762641 - | hypothetical protein TERM 2167 1763716 - 1763706 - G 73 -6.8 -4.2586 | opp_overlap 1763705 CGATATTAATATAAA TGGC ATA GCCA GTTGAGTAGGATACA TERM 2168 1764586 - 1764572 - R 86 -5.7 -5.6473 | opp_overlap 1764572 1764571, overlap 1764564 ATAACATTAAAAAAA TAGCC CTCAC GGCTA CTTTTTAACATAGTG SPy_2112 1764918 - 1764613 - | hypothetical protein SPy_2113 1765349 - 1764930 - | Holliday junction resolvase-like protein TERM 2169 1765089 - 1765075 - G 70 -8.6 -3.31144 | opp_overlap 1765080 1765088, overlap 1765079 CGTTCATCTTGATAA TGGACT GGA AGTCCA AAGAGGTGCTCTATG SPy_2114 1765615 - 1765346 - | hypothetical protein TERM 2170 1765725 - 1765713 - R 93 -7.7 -5.47821 | opp_overlap 1765713 AGGTATTTAAAAAAA GCTCT ACA AGAGC TTTTAGAGTGCAGCA TERM 2171 1765713 - 1765725 + r 78 -7.7 -4.13767 | opp_overlap 1765713 AGGTATTTAAAAAAA GCTCT ACA AGAGC TTTTAGAGTGCAGCA TERM 2172 1765738 - 1765751 + r 70 -8.1 -3.29187 | overlap 1765734 1765733 1765731 AGCTTTTAGAGTGCA GCACG TAAT CGTGC TTCAGTATTTTCAAT spxA 1766126 - 1765728 - | transcriptional regulator Spx TERM 2173 1766069 - 1766081 + g 77 -7.7 -4.1711 | GCTTATGGGCATTTA GCCAA GTT TTGGC TTTCTTGCAGCTCGT TERM 2174 1766205 - 1766190 - R 71 -7.6 -3.5511 | opp_overlap 1766181 1766190, overlap 1766188 TCTTATCTATAAATA TAGGTC TTTG GACCTA TTTTTTTAATTTTAA TERM 2175 1766190 - 1766205 + r 100 -7.6 -5.79588 | opp_overlap 1766190 1766188, overlap 1766181 TCTTATCTATAAATA TAGGTC TTTG GACCTA TTTTTTTAATTTTAA TERM 2176 1766398 - 1766413 + r 73 -4.6 -4.88228 | opp_overlap 1766400, overlap 1766400 AAAATACATTTTAAA AAGCCC TGAA GGGCTC TTTTTAATCTTCAAT TERM 2177 1766400 - 1766411 + r 73 -7.2 -4.05583 | opp_overlap 1766400, overlap 1766398 AATACATTTTAAAAA GCCC TGAA GGGC TCTTTTTAATCTTCA TERM 2178 1766411 - 1766400 - R 83 -7.2 -4.6644 | opp_overlap 1766400 1766398 AATACATTTTAAAAA GCCC TGAA GGGC TCTTTTTAATCTTCA recA 1767553 - 1766417 - | recombinase A cinA 1768913 - 1767642 - | competence damage-inducible protein A TERM 2179 1768989 - 1768963 - R 95 -8.9 -5.15634 | opp_overlap 1768963, overlap 1768983 CATTTTATCAAAAAA TCTTCCAATTC ACGAA GAATTAGAAGA TTCTATTGAAAACAC tag 1769542 - 1768982 - | DNA-3-methyladenine glycosylase ruvA 1770148 - 1769552 - | Holliday junction DNA helicase motor protein TERM 2180 1769741 - 1769757 + g 70 -9.5 -2.73243 | overlap 1769740 GGTATGACCAGTCTC TTGTGGA GCC TCCACAA ATTTGCCAGCTAAGT lmrP 1771370 - 1770150 - | putative integral membrane protein TERM 2181 1770626 - 1770614 - G 70 -9.1 -3.20349 | overlap 1770612 CTTGGAAACCTAATA CAGCC GTT GGCTG AAAATACAGTTTCAA TERM 2182 1771181 - 1771163 - G 73 -9.6 -3.14132 | CTTTTTTGCGACCAA GAGCATCT GAC AGATGCCC ACCGTATAAAGTTCC mutL 1773363 - 1771381 - | DNA mismatch repair protein TERM 2183 1772926 - 1772916 - G 79 -5.4 -5.00616 | opp_overlap 1772905 1772916 GCGTGTTGTAAAAAA GGTT TTC AACC TTAATTTTGGTTCCA int4 1774603 - 1773458 - | putative integrase - phage associated TERM 2184 1773794 - 1773815 + g 71 -3.7 -4.83615 | overlap 1773797 CTGTCTCATTTGATA GAGCTTTAG GCTT CTAAGGGTC TTTTTATCAACACTA TERM 2185 1774066 - 1774056 - G 74 -4 -5.03747 | AAATGTTCTAAAAAA GATT TCA AATC AGACGGATCAATAAA TERM 2186 1774743 - 1774773 + r 86 -4.7 -5.74086 | opp_overlap 1774733 TATTAGTCTTTTTAA GACCTTGCGAG CGTGGAAAA CTTGCGGGGTC TTTTTTGTTTGGTTT TERM 2187 1775036 - 1775007 - R 76 -3.6 -5.28414 | gap 1 GAACAAATAGAAAAA CCGTCCCACACTT TAGCC AATCGTGG-ACGG TTTATAGAAAATATA TERM 2188 1775094 - 1775115 + r 100 -9.5 -5.04597 | opp_overlap 1775094 AACGGTGTTACCACA GGAGATTGT TTGC GCAATCTCC TTTTTCTATGTCCAT SPy_2125 1776629 - 1775862 - | putative repressor protein - phage associated SPy_2126 1776783 - 1776989 + | hypothetical protein TERM 2189 1777480 - 1777462 - g 72 -10.4 -2.59431 | TGGCTTTAGAAGGTA CTACGAAA AAT TTTCGTAG TGGTCAAAAAGTTTG SPy_2127 1777023 - 1777790 + | hypothetical protein TERM 2190 1777837 - 1777823 - g 70 -8.6 -3.28393 | opp_overlap 1777822 1777823 AACAGAAACATGGAA CGGATA TAC TATCCG ATTTGTAGAGCACCA SPy_2128 1777800 - 1778423 + | hypothetical protein TERM 2191 1778428 - 1778415 - f 100 -8.1 -5.94214 | AACACAATAAAAAAA GCGCA GTGA TGCGC GTGGATAAAGGAGAA SPy_2129 1778423 - 1778692 + | hypothetical protein SPy_2130 1778948 - 1779289 + | hypothetical protein SPy_2131 1779276 - 1779497 + | hypothetical protein SPy_2132 1779500 - 1779691 + | hypothetical protein SPy_2133 1779703 - 1780032 + | hypothetical protein SPy_2134 1780035 - 1780307 + | hypothetical protein SPy_2135 1780308 - 1781165 + | putative replication protein TERM 2192 1781658 - 1781648 - gf 70 -5.4 -4.4195 | ACACACTTTACAAAA TTGC TAG GCAA AGTCAACTGAAGGAG SPy_2136 1781134 - 1782822 + | putative DNA primase - phage associated TERM 2193 1783084 - 1783053 - f 95 -12.6 -3.60098 | ACGGCTGACTTTAAA TTTTATACGTTTGA AAAA CCAAACGTATAAAA CGTATAAAATTCGGA SPy_2140 1783562 - 1783972 + | hypothetical protein TERM 2194 1783980 - 1783993 + F 76 -4.5 -5.10601 | TTAAATAGACATTCA GAGGG TTTT TCCTC TTTTTGTCGTTTTAT TERM 2195 1784215 - 1784225 + G 71 -4 -4.85129 | CAGGAACTTATGGTG GTAA ACG TTAC TTTTTCGTGTGTCCT SPy_2142 1784046 - 1784534 + | hypothetical protein TERM 2196 1784739 - 1784725 - f 72 -5.8 -4.43681 | CATCTAAGACTAAAA TAAAAC ATT GTTTTA GCGCTTCTAGCTACT TERM 2197 1784889 - 1784859 - f 75 -4.7 -4.90918 | overlap 1784865 ACAAAACGAACAAAA CAAAAAGACGTCC ACACG GAACGCCCCCTTG GTTAAATTTAAGCTT TERM 2198 1784883 - 1784865 - f 85 -4.5 -5.62288 | overlap 1784859 CGAACAAAACAAAAA GACGTCC ACACG GAACGCC CCCTTGGTTAAATTT SPy_2144 1784938 - 1785300 + | hypothetical protein SPy_2145 1785275 - 1785658 + | hypothetical protein SPy_2147 1785832 - 1786407 + | hypothetical protein TERM 2199 1786699 - 1786680 - T 82 -7.9 -4.55798 | opp_overlap 1786680 TAGGGCAAACTAAAA GCGTAGT ATTTAA ACTACGC TAGTTCTTGCCTGCT TERM 2200 1786732 - 1786745 + T 95 -6.7 -5.80364 | opp_overlap 1786732 1786731 ACTCATTGTGTAAAG GACCT GTAA AGGTC TTTTTTTGTTCACCT TERM 2201 1786975 - 1786998 + T 79 -5.3 -5.0925 | opp_overlap 1786975 TTGACAGAACAAAAA GATGCCTTC AATATA GAAAGCATC TTTTTCATTTTCAGC TERM 2202 1786998 - 1786975 - T 89 -7.5 -5.24796 | opp_overlap 1786975 TTGACAGAACAAAAA GATGCCTTC AATATA GAAAGCATC TTTTTCATTTTCAGC mutS 1789576 - 1787021 - | DNA mismatch repair protein TERM 2203 1787421 - 1787380 - G 82 -11.2 -3.25823 | gap 1, opp_overlap 1787382, overlap 1787382 GCGTTGCTACATGAA CATTGACTAGACTTGTCAA GTTAG TTGACAAGTCT-GTCAATT CATGATAATGCGTTG TERM 2204 1787419 - 1787382 - G 93 -13.8 -3.19602 | gap 1, opp_overlap 1787382, overlap 1787380 GTTGCTACATGAACA TTGACTAGACTTGTCAA GTTAG TTGACAAGTCT-GTCAA TTCATGATAATGCGT TERM 2205 1787382 - 1787419 + g 93 -13.8 -3.23395 | gap 1, opp_overlap 1787382 1787380 GTTGCTACATGAACA TTGACTAGACTTGTCAA GTTAG TTGACAAGTCT-GTCAA TTCATGATAATGCGT TERM 2206 1789541 - 1789509 - G 80 -2.1 -5.54079 | gap 1, opp_overlap 1789509 1789512 CTAAAAAGCAAAAAA GCATCTGGATAATC TTTTTT GATG-TCCAGATAC TGTTGCATTCCAGGA SPy_2149 1789769 - 1789563 - | hypothetical protein ahrC 1790349 - 1789912 - | putative arginine repressor argS 1790640 - 1792331 + | arginyl-tRNA synthetase TERM 2207 1792373 - 1792344 - f 76 -10.1 -2.88074 | opp_overlap 1792344, overlap 1792341 1792348 TAAGTAATAACATTA CTAAGGCTGTCAC ATTT ATGACAGTCTTAG TTTTTTATATTATAA TERM 2208 1792344 - 1792373 + F 100 -11.6 -5.5208 | opp_overlap 1792344 1792341 1792348 TAAGTAATAACATTA CTAAGGCTGTCA CATTTA TGACAGTCTTAG TTTTTTATATTATAA SPy_2152 1792419 - 1792727 + | hypothetical protein TERM 2209 1792725 - 1792756 + T 82 -9 -4.04811 | opp_overlap 1792725 1792731, overlap 1792731 AGTGGGGGACCAAAA TAAAAATACAGG CTGTTTGA CCTGTATTTTTA TTTATCATAATTTCT TERM 2210 1792756 - 1792725 - T 93 -9.7 -4.25283 | opp_overlap 1792725 1792731, overlap 1792731 AGTGGGGGACCAAAA TAAAAATACAGGC TGTTTG ACCTGTATTTTTA TTTATCATAATTTCT TERM 2211 1792731 - 1792750 + T 79 -3.6 -5.40464 | opp_overlap 1792725 1792731, overlap 1792725 GGACCAAAATAAAAA TACAGG CTGTTTGA CCTGTA TTTTTATTTATCATA TERM 2212 1792750 - 1792731 - T 82 -4.3 -5.50723 | opp_overlap 1792731 1792725, overlap 1792725 GGACCAAAATAAAAA TACAGGC TGTTTG ACCTGTA TTTTTATTTATCATA SPy_2153 1793626 - 1792754 - | hypothetical protein SPy_2154 1794547 - 1793669 - | hypothetical protein SPy_2155 1795508 - 1794567 - | hypothetical protein TERM 2213 1794797 - 1794820 + g 75 -3 -5.18643 | overlap 1794798 TCACACGCTCTGGAT GGCTGGTAAC AATA GTTGCCTGCA TTTTCTTTTGCTTGG TERM 2214 1795373 - 1795403 + g 74 -4 -5.09762 | opp_overlap 1795367 1795376, overlap 1795375 1795376 TAGAGAGAATGCCAT AAAGCAGAGAAG CCGAAAT CTTCTCTGCATA TTTTTCTCTTGAAAT TERM 2215 1795375 - 1795401 + g 73 -6.6 -4.17211 | opp_overlap 1795367 1795376, overlap 1795373 1795376 GAGAGAATGCCATAA AGCAGAGAAG CCGAAAT CTTCTCTGCA TATTTTTCTCTTGAA TERM 2216 1795376 - 1795400 + g 75 -10.1 -3.09242 | opp_overlap 1795367 1795376, overlap 1795375 1795373 AGAGAATGCCATAAA GCAGAGAAG CCGAAAT CTTCTCTGC ATATTTTTCTCTTGA TERM 2217 1795400 - 1795376 - G 84 -10.1 -3.94381 | opp_overlap 1795376 1795375 1795373, overlap 1795367 AGAGAATGCCATAAA GCAGAGAAG CCGAAAT CTTCTCTGC ATATTTTTCTCTTGA aspS 1797249 - 1795501 - | aspartyl-tRNA synthetase TERM 2218 1796339 - 1796355 + g 70 -9.5 -2.52742 | overlap 1796338 TTGAAGTCATTTCCT TTGACAG TTA CTGTCAA GTCTTGTAAAAGCAT TERM 2219 1797429 - 1797400 - R 78 -7.3 -4.32857 | opp_overlap 1797407, overlap 1797407 TTTTCTAAAGATAAA GCAAAAATACTGA GCCG TCAGTATTTTGAC ATATCAAGTGTCCTC TERM 2220 1797422 - 1797407 - R 83 -6.2 -5.08367 | opp_overlap 1797407, overlap 1797400 AAGATAAAGCAAAAA TACTGA GCCG TCAGTA TTTTGACATATCAAG TERM 2221 1797526 - 1797489 - R 100 -11.5 -4.83243 | gap 1, opp_overlap 1797489 CTTACAGAAAACAAA CAGGTGCAACTCC-CTTC TAA AAAGAGAAGTTACACCTG TTTTAGTGATTATCT TERM 2222 1797489 - 1797526 + r 74 -6.4 -4.38129 | gap 1, opp_overlap 1797489 CTTACAGAAAACAAA CAGGTGCAACT-CCCTT CTAAA AAGAGAAGTTACACCTG TTTTAGTGATTATCT hisS 1798867 - 1797587 - | histidyl-tRNA synthetase TERM 2223 1799021 - 1798992 - H 84 -3.7 -5.61881 | opp_overlap 1798997, overlap 1798993 TTGTAAAAATAAAAA GTTTTGTCAAGTA ACTT TACTTTACAAAAA AGATATGTTATCATA TERM 2224 1799020 - 1798993 - H 73 -7.2 -3.95502 | opp_overlap 1798997, overlap 1798992 TGTAAAAATAAAAAG TTTTGTCAAGTA ACTT TACTTTACAAAA AAGATATGTTATCAT TERM 2225 1799033 - 1799023 - H 76 -4 -5.26316 | overlap 1799025 TTACTTTACAAAAAA GATA TGT TATC ATAGTGAAGTTGATG rpmF 1799149 - 1799268 + | 50S ribosomal protein L32 rpmG 1799284 - 1799433 + | 50S ribosomal protein L33 cadD 1799726 - 1800340 + | putative cadmium resistance protein cadC 1800352 - 1800690 + | putative cadmium efflux system accessory SPy_2164 1800720 - 1801664 + | hypothetical protein SPy_2165 1801730 - 1802482 + | hypothetical protein SPy_2166 1802479 - 1803081 + | hypothetical protein TERM 2226 1803088 - 1803126 + F 84 -5.3 -5.55695 | gap 2 AAGCGTTAATTCCTT GGGGCTG--TGGCTTGCGT TAA GCAAAAGCCAGACAGCCCC TTTTTTATATTCTTA TERM 2227 1803351 - 1803396 + F 77 -8.5 -3.53091 | opp_overlap 1803356 1803361, overlap 1803353 1803354 1803361 AAGTAAAATAATTGA GATGAGAAAAGCCTATGAAAT GAAC GTTTCAAAGGCTTTTTTCGTG TTTAAAAAAACAAAT TERM 2228 1803353 - 1803394 + F 87 -11.1 -3.34398 | opp_overlap 1803356 1803361, overlap 1803351 1803354 1803361 GTAAAATAATTGAGA TGAGAAAAGCCTATGAAAT GAAC GTTTCAAAGGCTTTTTTCG TGTTTAAAAAAACAA TERM 2229 1803354 - 1803393 + F 86 -12.4 -2.60496 | opp_overlap 1803356 1803361, overlap 1803353 1803351 1803361 TAAAATAATTGAGAT GAGAAAAGCCTATGAAAT GAAC GTTTCAAAGGCTTTTTTC GTGTTTAAAAAAACA TERM 2230 1803361 - 1803386 + F 89 -6.9 -5.32699 | opp_overlap 1803356 1803361, overlap 1803354 1803353 1803351 ATTGAGATGAGAAAA GCCTATGAAAT GAAC GTTTCAAAGGC TTTTTTCGTGTTTAA TERM 2231 1803386 - 1803361 - f 74 -6.2 -4.51378 | opp_overlap 1803361 1803354 1803353 1803351, overlap 1803356 ATTGAGATGAGAAAA GCCTATGAAA TGAACG TTTCAAAGGC TTTTTTCGTGTTTAA TERM 2232 1804091 - 1804107 + F 73 -4.5 -4.88405 | overlap 1804086 1804100 1804101 ATAATTATCGTAAGG TTTACAG TCT TTGTAAA TTTTATTTACAACTT TERM 2233 1804889 - 1804899 + G 84 -6.8 -4.84761 | overlap 1804885 ATCGGAGGAGTCCTA GCCA TCT TGGC TTTTTCTAAAAGTAT SPy_2169 1804292 - 1805134 + | hypothetical protein TERM 2234 1805169 - 1805158 - T 70 -4.4 -4.82901 | GTTTGTTGACAAAAA GTTG ACGC CAAC AAACTAGTGCTCTAT TERM 2235 1805187 - 1805214 + T 100 -9.2 -5.29846 | ACTAGTGCTCTATCT CCCCTTAGATTT TTCA ATATCTGAGGGG TTTTTCTTTGCAATT SPy_2170 1805822 - 1805181 - | hypothetical protein SPy_2172 1806029 - 1806355 + | hypothetical protein SPy_2173 1806342 - 1806929 + | hypothetical protein TERM 2236 1807362 - 1807338 - g 77 -5 -5.00616 | opp_overlap 1807338, overlap 1807341 CTGTTCCTGAAAAAA CTAGCCTCAA TGAAG TTAAGGCAAG TAATGTCCCACATAC SPy_2174 1806926 - 1808005 + | hypothetical protein TERM 2237 1808045 - 1808027 - T 93 -7.5 -5.64304 | opp_overlap 1808027, overlap 1808038 CAAGACAATAAAAAA CTTGACA GAAAT TGTCAAG TTATTGTCAAAATAA TERM 2238 1808027 - 1808045 + T 75 -8.2 -3.79906 | opp_overlap 1808027 1808038 CAAGACAATAAAAAA CTTGACAG AAA TTGTCAAG TTATTGTCAAAATAA TERM 2239 1808099 - 1808070 - T 83 -5 -5.57729 | opp_overlap 1808070 AAATAAGACAAAAAA CAGCATCTAGTG TAACTG CCTTAGATGCTG TTTTTTTTTTGAGGT TERM 2240 1808070 - 1808099 + T 100 -7.9 -6.3578 | opp_overlap 1808070 AAATAAGACAAAAAA CAGCATCTAGTGT AACT GCCTTAGATGCTG TTTTTTTTTTGAGGT SPy_2176 1810396 - 1808123 - | hypothetical protein TERM 2241 1810512 - 1810482 - H 90 -4 -5.84432 | opp_overlap 1810486, overlap 1810483 1810484 1810486 TACAAGAGAAAAAAA TTCACTTTTGGACA TTA TGTCTAAAAGTGTT CAAAAGGAGAGATGG TERM 2242 1810511 - 1810483 - H 76 -7.5 -4.08219 | opp_overlap 1810486, overlap 1810482 1810484 1810486 ACAAGAGAAAAAAAT TCACTTTTGGACA TTA TGTCTAAAAGTGT TCAAAAGGAGAGATG TERM 2243 1810510 - 1810484 - H 83 -11 -3.02491 | opp_overlap 1810486, overlap 1810483 1810482 1810486 CAAGAGAAAAAAATT CACTTTTGGACA TTA TGTCTAAAAGTG TTCAAAAGGAGAGAT TERM 2244 1810486 - 1810508 + H 77 -10 -3.01712 | opp_overlap 1810486 1810484 1810483 1810482 AGAGAAAAAAATTCA CTTTTGGACA TTA TGTCTAAAAG TGTTCAAAAGGAGAG SPy_2177 1810531 - 1811064 + | TetR/AcrR family transcriptional regulator TERM 2245 1811202 - 1811172 - T 73 -9.2 -2.94218 | opp_overlap 1811174 1811180, overlap 1811180 ATTTGTTATGAGATA CAAAAAAAGCCTAT TAA ATAGGCTTTTTGTA AGTTTAATCTTAAAA TERM 2246 1811174 - 1811200 + T 75 -9.6 -2.71059 | opp_overlap 1811172 1811180, overlap 1811180 TTGTTATGAGATACA AAAAAAGCCTAT TAA ATAGGCTTTTTG TAAGTTTAATCTTAA TERM 2247 1811180 - 1811194 + T 95 -8.6 -4.94992 | opp_overlap 1811172 1811180, overlap 1811174 TGAGATACAAAAAAA GCCTAT TAA ATAGGC TTTTTGTAAGTTTAA TERM 2248 1811194 - 1811180 - T 95 -8.6 -5.76633 | opp_overlap 1811180 1811174, overlap 1811172 TGAGATACAAAAAAA GCCTAT TAA ATAGGC TTTTTGTAAGTTTAA rpsD 1811829 - 1811218 - | 30S ribosomal protein S4 SPy_2180 1813253 - 1812120 - | putative transposase TERM 2249 1813879 - 1813867 - R 100 -9.1 -5.28942 | TATTGTAAAGAAAAA GCCTC TAT GAGGC AAAAATCAATCTAAA SPy_2181 1814157 - 1813885 - | hypothetical protein holB 1815541 - 1814174 - | replicative DNA helicase TERM 2250 1815148 - 1815180 + g 91 -13.5 -2.62184 | opp_overlap 1815139 1815150 TTAAAATTTCATCAT AAGCTAGGTTGACAG ATT CTGTCAACCTAGCAA TAATATCACGCAACA TERM 2251 1815178 - 1815150 - G 100 -20.5 -3.43689 | opp_overlap 1815148, overlap 1815139 AAAATTTCATCATAA GCTAGGTTGACAG ATT CTGTCAACCTAGC AATAATATCACGCAA rplI 1816023 - 1815571 - | 50S ribosomal protein L9 SPy_2184 1817996 - 1816020 - | hypothetical protein TERM 2252 1816273 - 1816308 + g 85 -4.2 -5.67063 | gap 1, overlap 1816274 1816277 GACAGTATCGTATCT GCAGCTTTACTAGCAAT AAC ATTGCTA-TAAAGATGA TTTTTTTCTCCTGCA TERM 2253 1816274 - 1816307 + g 75 -7.7 -3.99153 | gap 1, overlap 1816273 1816277 ACAGTATCGTATCTG CAGCTTTACTAGCAAT AAC ATTGCTA-TAAAGATG ATTTTTTTCTCCTGC TERM 2254 1817935 - 1817915 - G 70 -8.3 -3.32844 | overlap 1817917 TTTTTGATTGCATAA TACTGACAC AAA GTGCCAGCA GTCCAAATAAAATCA TERM 2255 1818051 - 1818035 - R 84 -5.8 -5.34555 | TTATACCATAAAAAA GCCCTG AAATA CAGAGC TTCCACTTGCTTTGA gidA 1819985 - 1818087 - | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA SPy_2186 1820426 - 1820109 - | hypothetical protein TERM 2256 1820530 - 1820519 - R 73 -3.6 -5.04325 | overlap 1820520 GCTAAACCATAAAAA GGGC CAAA ACCC TAGAAGATTGCAGGA trmU 1822324 - 1821203 - | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase TERM 2257 1821668 - 1821697 + g 72 -10.1 -2.65527 | overlap 1821667 1821666 AGTCATCATGCGACC TTTTTGTGCCGGT AAGT ACTGGCTCAAAAA CTGTTTGAAATTCTT TERM 2258 1821770 - 1821780 + g 71 -6.8 -4.10179 | CGTTGCAAGCCCTGC TCGC TCA GCGA TTTCTCTAACTTCTG TERM 2259 1822361 - 1822389 + H 74 -3.3 -5.21236 | opp_overlap 1822361 1822364, overlap 1822364 TAAGATAGAAAAAGA TAATCATCATATT ATG AATATTATGATTC TTTTTCTTATCAGTT TERM 2260 1822364 - 1822386 + H 72 -5 -4.68512 | opp_overlap 1822364 1822361, overlap 1822361 GATAGAAAAAGATAA TCATCATATT ATG AATATTATGA TTCTTTTTCTTATCA TERM 2261 1822514 - 1822527 + H 76 -2.5 -5.55769 | GGAATGCCAATCATT TTATT GCTC AATAA TTTTTTATTATAAAA sdhB 1822622 - 1823293 + | putative L-serine dehydratase beta subunit TERM 2262 1823824 - 1823846 + G 80 -10.6 -3.38812 | overlap 1823822 GCAGAAGTTGGTTCT GCAGCTGC TATGAGT GCAGCTGC TCTTGTTAAAGCAGC sdhA 1823305 - 1824177 + | putative L-serine dehydratase alpha subunit TERM 2263 1824532 - 1824569 + T 100 -14.5 -4.1552 | opp_overlap 1824537, overlap 1824537 AGACAATTAAATACC AAAAACCTATTGTTAGT AAAT ACTAACAATAGGTTTTA TTTCTTCCAGCCATG TERM 2264 1824564 - 1824537 - T 100 -14.4 -4.946 | opp_overlap 1824532 1824537 ATTAAATACCAAAAA CCTATTGTTAGT AAAT ACTAACAATAGG TTTTATTTCTTCCAG TERM 2265 1824537 - 1824564 + T 100 -14.4 -5.09762 | opp_overlap 1824537, overlap 1824532 ATTAAATACCAAAAA CCTATTGTTAGT AAAT ACTAACAATAGG TTTTATTTCTTCCAG SPy_2191 1825204 - 1824590 - | hypothetical protein TERM 2266 1824984 - 1824997 + g 76 -2.4 -5.41941 | GGAATAGGCTCCGAA GCAA TGCTCT TTGC TTTTTCTTTGCTTTC TERM 2267 1825398 - 1825408 + r 74 -6.8 -4.39318 | opp_overlap 1825383 1825398, overlap 1825379 GTTCTGTATTGAACA GGAC TCA GTCC TTTTAGATTTCGTTC TERM 2268 1825531 - 1825491 - R 100 -12.1 -4.84642 | opp_overlap 1825502 1825503 1825510 CTCAAATGAAGAAAA GTACCTCAATCATTAGATA TTG TATCTAACTTTTGAGGTAC AATTCACTTCTTACT SPy_2193 1826376 - 1825576 - | hypothetical protein SPy_2194 1827211 - 1826369 - | cobalt transporter ATP-binding subunit SPy_2195 1828077 - 1827187 - | cobalt transporter ATP-binding subunit TERM 2269 1827277 - 1827293 + gr 77 -9.5 -3.29263 | opp_overlap 1827279 ACCTTCTTCTTGAAG CATCTGT ACA ACAGATG TTGTAAAAGGGATAT TERM 2270 1827462 - 1827472 + gr 79 -3.2 -5.4588 | CAGTCAGCTGGTAGT CGTC ACG GATG TTTTTTATAGTTTTG TERM 2271 1827953 - 1827966 + gr 73 -2.3 -5.20606 | ACATGAAACGATACG CCATC TAAT GTTGG TTTTTCTTGGTCTTT pgsA 1828570 - 1828028 - | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase SPy_2197 1829609 - 1828584 - | hypothetical protein SPy_2198 1830948 - 1829659 - | hypothetical protein SPy_2199 1832194 - 1830950 - | hypothetical protein TERM 2272 1831786 - 1831796 + g 78 -2.6 -5.50499 | CTGACTCGATGTAGT TAAT CAA ATTA TTTTTTTCAGTCTCA TERM 2273 1832447 - 1832479 + H 83 -2.2 -5.86609 | opp_overlap 1832456, overlap 1832450 1832451 AACAATTCAATTATT TTGAGATAATTTAT ATTAA ATAAATTATCCTGA TTTTTCTTTTTTTGG hasA 1832625 - 1833884 + | hyaluronate synthase hasB 1833920 - 1835128 + | UDP-glucose 6-dehydrogenase TERM 2274 1836199 - 1836240 + G 100 -20.6 -5.4148 | opp_overlap 1836199 AAGCTTTGGAAAAAA GTAAAGTACCAACACATT CAAAGT AATGTGTTGGTACTTTAC TTTTTTCCTTGTTTA TERM 2275 1836240 - 1836199 - g 100 -20.6 -5.01732 | opp_overlap 1836199 AAGCTTTGGAAAAAA GTAAAGTACCAACACATT CAAAGT AATGTGTTGGTACTTTAC TTTTTTCCTTGTTTA hasC 1835310 - 1836224 + | UDP-glucose pyrophosphorylase SPy_2203 1836532 - 1836945 + | hypothetical protein recF 1836947 - 1838053 + | recombination protein F TERM 2276 1838099 - 1838054 - T 91 -12.3 -3.20382 | gap 1, opp_overlap 1838068, overlap 1838057 1838067 1838068 TCTGATATTCACTAA TAACATCAAAAAAGGGTTCAGT TAA ACTGAGCC-TTTTTTGATATTA TGTGGCGATTAAGAT TERM 2277 1838096 - 1838057 - T 83 -9.6 -3.74361 | gap 1, opp_overlap 1838068, overlap 1838054 1838067 1838068 GATATTCACTAATAA CATCAAAAAAGGGTTCAGT TAA ACTGAGCC-TTTTTTGATA TTATGTGGCGATTAA TERM 2278 1838087 - 1838067 - T 76 -3.9 -5.31545 | opp_overlap 1838068, overlap 1838057 1838054 1838068 AATAACATCAAAAAA GGGTTCAGT TAA ACTGAGCCT TTTTTGATATTATGT TERM 2279 1838068 - 1838086 + T 100 -9.6 -5.30189 | opp_overlap 1838067 1838057 1838054 1838068 ATAACATCAAAAAAG GGTTCAGT TAA ACTGAGCC TTTTTTGATATTATG TERM 2280 1838086 - 1838068 - T 73 -7.4 -3.76487 | opp_overlap 1838068, overlap 1838067 1838057 1838054 ATAACATCAAAAAAG GGTTCAGT TAA ACTGAGCC TTTTTTGATATTATG SPy_2205 1838941 - 1838108 - | hypothetical protein TERM 2281 1839150 - 1839128 - R 86 -6.2 -5.47159 | TTTTAATATAAAAAA GAGCTGGCAC AAT ATGTCAGCCC TTAAAGTTACTAAAT guaB 1840654 - 1839173 - | inositol-5-monophosphate dehydrogenase TERM 2282 1840829 - 1840854 + r 81 -10.7 -2.8805 | opp_overlap 1840852 AAAAAATTCATTTGG GTCTTATTTTT AATC AAAAATAAGAC TATATAAAACATAAT trsA 1841984 - 1840962 - | tryptophanyl-tRNA synthetase II TERM 2283 1842047 - 1842021 - H 83 -6.5 -4.84527 | opp_overlap 1842021, overlap 1842023 TTGATATAGCAAAAA GTCCCCACGCT ATTAA AACGTGAGGGC GTTATTACAAGTAAT TERM 2284 1842634 - 1842624 - g 70 -2.6 -5.07652 | TCTTGGAAAACAAAA TTTT ATT AAAA CACTTTATGGTTCTT SPy_2209 1842403 - 1843275 + | hypothetical protein SPy_2210 1843354 - 1844973 + | ABC transporter, ATP-binding protein TERM 2285 1844992 - 1845019 + F 90 -8.4 -5.1361 | opp_overlap 1844991, overlap 1844994 CTTATGATAAATGAG GTGGCTAAGAAG ATCT CTTCCTAGCCTC TTTTTTAAAATTTGT TERM 2286 1844994 - 1845017 + F 93 -9.6 -4.18259 | opp_overlap 1844991, overlap 1844992 TATGATAAATGAGGT GGCTAAGAAG ATCT CTTCCTAGCC TCTTTTTTAAAATTT TERM 2287 1846194 - 1846214 + G 80 -7.7 -4.37527 | opp_overlap 1846194, overlap 1846199 AAGAAGTGACTCAAA TAAAAGCAG GTT TTGCTTTTA TTTTCCTCATTATAC TERM 2288 1846199 - 1846209 + G 72 -3.2 -5.14626 | opp_overlap 1846194, overlap 1846194 GTGACTCAAATAAAA GCAG GTT TTGC TTTTATTTTCCTCAT SPy_2211 1845056 - 1847632 + | ABC transporter permease TERM 2289 1848116 - 1848098 - T 100 -10.4 -5.99154 | opp_overlap 1848097 1848096 TACTAAATAAAAAAA TCCTAAGA TTA TCTTAGGA AATATCTTATCACTC TERM 2290 1848229 - 1848215 - T 95 -5 -6.20267 | GGAAAAAGAAAAAAA TTGCCA AAA TGACAA TTGCGATAGTCCGTA TERM 2291 1849311 - 1849322 + T 78 -2.2 -5.59534 | AATTCTAGTATATCA GACG AACA TGTC TTTTTTGTTGTACTT TERM 2292 1849530 - 1849516 - T 84 -5.7 -5.5762 | opp_overlap 1849516, overlap 1849509 ATCAAAGATAAAAAA GCACT GTTTT AGTGC TTTTTTTGTATTTAC TERM 2293 1849516 - 1849530 + T 95 -6.4 -5.88197 | opp_overlap 1849516 1849509 ATCAAAGATAAAAAA GCACTG TTT TAGTGC TTTTTTTGTATTTAC SPy_2215 1850140 - 1849661 - | SPOUT methyltransferase superfamily protein TERM 2294 1850241 - 1850208 - H 89 -13.5 -2.71011 | opp_overlap 1850212 1850216 1850218, overlap 1850212 1850218 ATTTTTCTTCAACTA CTAATAAAAACCTTT GTAC AAAGGTCTTTATTAG TAAAAAGAAAAGTAA TERM 2295 1850237 - 1850212 - H 73 -8.5 -3.27298 | opp_overlap 1850212 1850216 1850218, overlap 1850208 1850218 TTCTTCAACTACTAA TAAAAACCTTT GTAC AAAGGTCTTTA TTAGTAAAAAGAAAA TERM 2296 1850231 - 1850218 - H 79 -5.3 -5.16071 | opp_overlap 1850216 1850212 1850218, overlap 1850212 1850208 AACTACTAATAAAAA CCTTT GTAC AAAGG TCTTTATTAGTAAAA TERM 2297 1850280 - 1850248 - H 100 -19.5 -4.77036 | opp_overlap 1850248, overlap 1850253 CTTTATTAGTAAAAA GAAAAGTAATCCACA GGC TGTGGATTACTTTTC TTTTTTTTATTTTTA TERM 2298 1850248 - 1850280 + H 100 -19.5 -6.4275 | opp_overlap 1850248 1850253 CTTTATTAGTAAAAA GAAAAGTAATCCACA GGC TGTGGATTACTTTTC TTTTTTTTATTTTTA TERM 2299 1850275 - 1850253 - H 100 -13.6 -5.3104 | opp_overlap 1850248, overlap 1850248 TTAGTAAAAAGAAAA GTAATCCACA GGC TGTGGATTAC TTTTCTTTTTTTTAT htrA 1850352 - 1851575 + | putative serine protease TERM 2300 1851608 - 1851636 + F 100 -17.7 -4.55093 | opp_overlap 1851600 1851610 1851615, overlap 1851615 TATTACATTTTATCA CATAAAACAGTCC AAA GGACTGTTTTATG TTTCTTATTCTATCC TERM 2301 1851634 - 1851610 - f 95 -14.5 -2.80443 | opp_overlap 1851608 1851615, overlap 1851600 1851615 TTACATTTTATCACA TAAAACAGTCC AAA GGACTGTTTTA TGTTTCTTATTCTAT TERM 2302 1851615 - 1851629 + F 100 -10 -4.91194 | opp_overlap 1851610 1851615, overlap 1851608 TTTTATCACATAAAA CAGTCC AAA GGACTG TTTTATGTTTCTTAT TERM 2303 1851629 - 1851615 - f 100 -10 -4.57353 | opp_overlap 1851615 1851608, overlap 1851610 TTTTATCACATAAAA CAGTCC AAA GGACTG TTTTATGTTTCTTAT spoJ 1851634 - 1852440 + | putative chromosome segregation protein