TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.605752 %AT, 1497810 nt, 10182 terms. Intergenic: 0.648444 %AT, H2T: 245323 nt, 1990 terms; T2T: 59634 nt, 1260 terms; H2H: 53054 nt, 913 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|139472888|ref|NC_009332.1| Streptococcus pyogenes str. Manfredo, complete genome (length 1841271) TERM 1 1332 - 1312 - g 73 -6.9 -4.14392 | GCGCAAGTTGGAAAA TTTTACGGT GTT ACCGTCAAA GAAATTAAAGCTACT dnaA 202 - 1557 + | chromosomal replication initiation protein TERM 2 1847 - 1818 - g 90 -8.7 -5.1356 | opp_overlap 1823 TTTCATCAATAAAAA TTGAAGTCACTCC TACA GGAGTAACTTTAA CAGGGTCTAACGGTC TERM 3 2150 - 2160 + G 71 -6.8 -4.0896 | TTGAAGTCTATTATT GCTG AAA CAGC TTTTGCAGCCAGTTT dnaN 1712 - 2848 + | DNA polymerase III subunit beta TERM 4 2860 - 2873 + F 93 -3.8 -5.97979 | opp_overlap 2860 CTAAGTAAGAAAAAG CTCC CTTTTA GGAG TTTTTTTGTTATTAT SpyM50003 2923 - 3120 + | hypothetical protein SpyM50004 3450 - 4565 + | translation-associated GTPase TERM 5 5124 - 5150 + G 90 -8.8 -4.86731 | GCTATTTCGTTAACT CTTGACAGAGTT GTC AATGCTGTCAAG TTTTATTTACAAGAA pth 4635 - 5204 + | peptidyl-tRNA hydrolase TERM 6 6199 - 6185 - g 70 -8.6 -3.29626 | GAAGATTTACAGCAA GGAAAG GCT CTTTCC AATCTTAACTACTTT TERM 7 7262 - 7243 - g 70 -5.8 -4.32034 | overlap 7244 GCAGCATTATGAAAA CTTCAAAG CACG CTTTGAAA ATTACCTTGTTGAGG TERM 8 7502 - 7479 - g 70 -3.2 -4.95957 | overlap 7480 TAAAGGAATTAAAAA CTAAGGTTGA CGTC TTAACCTTAA CAGCTACTCCGATTC TERM 9 7860 - 7884 + G 72 -4.3 -4.67607 | opp_overlap 7862, overlap 7862 CAATCATCGAAACAG GAGTTGACATT TCT AATGTAAACAC TTTGTTTATTGAGAA trcF 5207 - 8710 + | putative transcription-repair coupling factor SpyM50007 8872 - 9144 + | S4 domain-containing protein TERM 10 9327 - 9301 - g 76 -11.1 -2.74605 | opp_overlap 9299 TCTTGTCAAAAGTTA TGTTGATTTTG AAAAG CAAAATCAACA GGTGGTTAAATTAAA SpyM50008 9131 - 9502 + | putative septum formation initiator protein SpyM50009 9499 - 9624 + | hypothetical protein TERM 11 10127 - 10102 - g 79 -6.9 -4.57569 | TCATTTGCTCAAAAA GTTCATGCCAC TCAA ATGGCACAAAC AAACCATGGAACTTA SpyM50010 9637 - 10923 + | hypothetical protein TERM 12 10971 - 10958 - g 88 -3.9 -5.72053 | TAATGAAATAAAAAA TAAAG CCTA CTTTA AAAATCATAGACATG TERM 13 11005 - 11033 + G 82 -6.1 -4.92363 | TAATAGCCGTATCTG GTGGAGTAGATTC AAT GAATTTATTGCAC TTTTTATACCTGTTT SpyM50011 10920 - 12206 + | PP-loop family protein hpt 12211 - 12753 + | hypoxanthine-guanine phosphoribosyltransferase TERM 14 13924 - 13894 - g 77 -4.8 -4.87389 | CATGCTAAAAATAAA CCACTTGCAAATGA CGT TAATTTGAAAGTAG TAGCCCAACAGACTC ftsH 12775 - 14754 + | putative cell division protease FtsH TERM 15 14801 - 14752 - f 95 -13.4 -3.33261 | gap 1, opp_overlap 14764, overlap 14764 TCTGAATCTGCAGAA TG-ATATAAAAAAGCTGAACTTA TAGAT TAAGTTCAGCTTTTTTATAAACA CAATATCCTTGTAAA TERM 16 14764 - 14788 + F 100 -11.6 -5.24129 | opp_overlap 14752 14764 GAATGATATAAAAAA GCTGAACTTA TAGAT TAAGTTCAGC TTTTTTATAAACACA TERM 17 14788 - 14764 - f 100 -11.6 -5.42131 | opp_overlap 14764, overlap 14752 GAATGATATAAAAAA GCTGAACTTA TAGAT TAAGTTCAGC TTTTTTATAAACACA SpyM50014 15079 - 16470 + | putative amino acid permease TERM 18 16613 - 16585 - f 84 -11.8 -3.19038 | opp_overlap 16585, overlap 16577 TTTAAAATTACCCAA CCCCTAGAGAAT TGATT AGTCTCTAGGGG TTGATTGGCACAATG TERM 19 16585 - 16613 + F 85 -11.8 -3.34013 | opp_overlap 16585 16577 TTTAAAATTACCCAA CCCCTAGAGAAT TGATT AGTCTCTAGGGG TTGATTGGCACAATG TERM 20 17011 - 16997 - f 90 -8.6 -4.65032 | GAAACGAGAAATAAA TCTGTC AGC GACAGA AGGAACGAGTAAGTT TERM 21 18051 - 18064 + F 70 -5.3 -4.43477 | ACATCCCGATGCCCG CTCTA GAGA TAGAG TTTTACTTCGGTACA TERM 22 18820 - 18775 - f 78 -7.7 -4.2558 | gap 1, opp_overlap 18782, overlap 18782 CACTTCCTAGGAAAA TAGACAATCTTCCCTTGTGTGC AAG GCACACATGGTCAGATT-CCTA ATTTTCTACAGAAGT TERM 23 18782 - 18814 + F 73 -9.1 -3.3972 | opp_overlap 18775 18782 TAGGAAAATAGACAA TCTTCCCTTGTGTGC AAG GCACACATGGTCAGA TTCCTAATTTTCTAC TERM 24 18814 - 18782 - f 80 -9.1 -3.84985 | opp_overlap 18782, overlap 18775 TAGGAAAATAGACAA TCTTCCCTTGTGTGC AAG GCACACATGGTCAGA TTCCTAATTTTCTAC TERM 25 19294 - 19275 - f 90 -12.2 -3.62096 | opp_overlap 19274 19273 CGGCAGGAGGGCAAA CCGAAGTG TTTA CACTTCGG GGTTGTAGGACTGCG TERM 26 19986 - 19953 - f 70 -8.9 -3.03412 | overlap 19952 19975 CAATCTCAGATAAAC TCCGAATGCCAACGA GATA TCATCGGCAGTCAGA CTGCGAGTGCTAAGA TERM 27 23012 - 22998 - f 90 -8.6 -4.65032 | GAAACGAGAAATAAA TCTGTC AGC GACAGA AGGAACGAGTAAGTT TERM 28 24052 - 24065 + F 70 -5.3 -4.43477 | ACATCCCGATGCCCG CTCTA GAGA TAGAG TTTTACTTCGGTACA TERM 29 24821 - 24776 - f 78 -7.7 -4.2558 | gap 1, opp_overlap 24783, overlap 24783 CACTTCCTAGGAAAA TAGACAATCTTCCCTTGTGTGC AAG GCACACATGGTCAGATT-CCTA ATTTTCTACAGAAGT TERM 30 24815 - 24783 - f 80 -9.1 -3.84985 | opp_overlap 24783, overlap 24776 TAGGAAAATAGACAA TCTTCCCTTGTGTGC AAG GCACACATGGTCAGA TTCCTAATTTTCTAC TERM 31 24783 - 24815 + F 73 -9.1 -3.3972 | opp_overlap 24783 24776 TAGGAAAATAGACAA TCTTCCCTTGTGTGC AAG GCACACATGGTCAGA TTCCTAATTTTCTAC TERM 32 25295 - 25276 - f 90 -12.2 -3.62096 | opp_overlap 25275 25274 CGGCAGGAGGGCAAA CCGAAGTG TTTA CACTTCGG GGTTGTAGGACTGCG TERM 33 25987 - 25954 - f 70 -8.9 -3.03412 | overlap 25953 25976 CAATCTCAGATAAAC TCCGAATGCCAACGA GATA TCATCGGCAGTCAGA CTGCGAGTGCTAAGA TERM 34 29635 - 29647 + F 88 -5.5 -5.70829 | opp_overlap 29635 TATTAGGGGAAAGAA GACGG TTA TCGTC TTTTTTTGTAATCTT SpyM50015 30944 - 32140 + | putative amidase TERM 35 32152 - 32173 + F 100 -11.7 -5.00339 | opp_overlap 32148 CTAACATATTATTTA GGTTAGAAC AGTT GTTCTAACC TTTTTGATTATTCCT prs1 32393 - 33355 + | ribose-phosphate pyrophosphokinase TERM 36 33366 - 33388 + F 100 -9.9 -4.75174 | opp_overlap 33356 33366 ATTAAGCTTAACGAA GCCTGAGAT AATAG ATCTCGGGC TTTTTGACTTGAATA recO 33541 - 34296 + | DNA repair protein RecO plsX 34399 - 35406 + | putative glycerol-3-phosphate acyltransferase PlsX SpyM50019 35399 - 35641 + | acyl carrier protein TERM 37 35645 - 35680 + F 100 -18 -3.53091 | opp_overlap 35648 35651 35657, overlap 35648 35651 35657 CGTTTGACTTAGTTA GAATAATAAAAAGAGC GTAA GCTCTTTTTATTATTC TTTAAAAACGAACCT TERM 38 35677 - 35648 - f 100 -13.9 -3.36878 | opp_overlap 35645 35648 35651 35657, overlap 35651 35657 TTGACTTAGTTAGAA TAATAAAAAGAGC GTAA GCTCTTTTTATTA TTCTTTAAAAACGAA TERM 39 35648 - 35677 + F 100 -13.9 -3.90744 | opp_overlap 35648 35651 35657, overlap 35645 35651 35657 TTGACTTAGTTAGAA TAATAAAAAGAGC GTAA GCTCTTTTTATTA TTCTTTAAAAACGAA TERM 40 35674 - 35651 - f 88 -11.2 -3.82378 | opp_overlap 35648 35645 35651 35657, overlap 35648 35657 ACTTAGTTAGAATAA TAAAAAGAGC GTAA GCTCTTTTTA TTATTCTTTAAAAAC TERM 41 35651 - 35674 + F 89 -11.2 -4.08557 | opp_overlap 35651 35648 35657, overlap 35648 35645 35657 ACTTAGTTAGAATAA TAAAAAGAGC GTAA GCTCTTTTTA TTATTCTTTAAAAAC TERM 42 35668 - 35657 - f 89 -5.8 -5.34365 | opp_overlap 35651 35648 35645 35657, overlap 35651 35648 TTAGAATAATAAAAA GAGC GTAA GCTC TTTTTATTATTCTTT TERM 43 35657 - 35668 + F 89 -5.8 -5.40014 | opp_overlap 35657 35651 35648, overlap 35651 35648 35645 TTAGAATAATAAAAA GAGC GTAA GCTC TTTTTATTATTCTTT SpyM50022 36573 - 40346 + | putative phosphoribosylformylglycinamidine synthase protein purF 40580 - 42034 + | amidophosphoribosyltransferase TERM 44 42161 - 42140 - g 90 -3.8 -6.01369 | gap 1 GAAAGAATAAAAAAA CACGTTGCT CGTAC AG-AACGTG CGGGAGTCATGGGAG purM 42062 - 43084 + | phosphoribosylaminoimidazole synthetase TERM 45 43137 - 43109 - f 71 -9 -3.15008 | overlap 43107 TTTTATAAGAAAGGA GTGTTTAGTTAG TTTGC CTAACTGAACAC GGGATTAAATTTCTA purN 43252 - 43806 + | phosphoribosylglycinamide formyltransferase TERM 46 44191 - 44163 - T 77 -10.3 -2.92475 | overlap 44162 44165 TGGATTCCCAGAAAT GATGGACGGTCGT GTT AAGACCCTCCATC CAAACATTCACGGTG TERM 47 44199 - 44225 + T 70 -8.6 -3.01791 | opp_overlap 44196 44199 CCTCCATCCAAACAT TCACGGTGGGCT TTT GGCCCGTCGCGA TGTTGACAGCCACCT TERM 48 45504 - 45490 - T 76 -6.4 -4.42062 | opp_overlap 45489, overlap 45486 GACGCCGCAAACAAA CATGGC TTG ACCATG ATCTTCACAGGTGTG TERM 49 45566 - 45546 - T 93 -6.2 -5.84381 | opp_overlap 45546 GCATTAATAAAAAAA TGTGGTCT AATTA AAACCACA TTTTTTTATTAAAAG TERM 50 45546 - 45566 + T 90 -4 -5.7946 | opp_overlap 45546 GCATTAATAAAAAAA TGTGGTCT AATTA AAACCACA TTTTTTTATTAAAAG SpyM50028 46720 - 45596 - | putative amidase TERM 51 46405 - 46382 - G 76 -9 -3.72695 | gap 1, opp_overlap 46380 46378 46382 AGCGTTTTTATCAAA CCAAGCGATAG CCC CTAT-GCTTGG TGTCTTATTCACAGG TERM 52 46382 - 46405 + g 70 -9 -3.26444 | gap 1, opp_overlap 46382, overlap 46380 46378 AGCGTTTTTATCAAA CCAAGCGATAG CCC CTAT-GCTTGG TGTCTTATTCACAGG TERM 53 47543 - 47566 + G 73 -6.7 -4.27441 | GAGGAATTCTTGGAT GGCGAGGAG TTTTCC CTCTTTGCC TTTGTTAATGGTGAT purD 46973 - 48238 + | phosphoribosylamine--glycine ligase TERM 54 48286 - 48272 - f 82 -11.4 -2.78216 | overlap 48269 TAGCGTCAGCAATCA GCGACC GAA GGTCGC TCCAAAAAGAAAGAA purE 48519 - 49007 + | phosphoribosylaminoimidazole carboxylase catalytic subunit TERM 55 49047 - 49065 + G 73 -10.3 -2.87132 | opp_overlap 49049, overlap 49049 TCAGCTAGGGCAGAT GATGGCC ATTGC GGCCATC TATATGGGCCACAAG purK 48994 - 50067 + | phosphoribosylaminoimidazole carboxylase ATPase subunit SpyM50032 50069 - 51487 + | hypothetical protein purB 51507 - 52799 + | adenylosuccinate lyase TERM 56 52826 - 52811 - f 95 -4.7 -6.10295 | opp_overlap 52804 52811 52824, overlap 52800 TTAATATAAAAAAAA GAAGG TGATTC CCTTC TTTTTTATTTAAAAA TERM 57 52811 - 52826 + F 88 -4.7 -5.63517 | opp_overlap 52811 52800, overlap 52804 52824 TTAATATAAAAAAAA GAAGG TGATTC CCTTC TTTTTTATTTAAAAA SpyM50034 52930 - 53841 + | putative DNA-binding protein TERM 58 53852 - 53869 + F 74 -4.9 -4.73432 | overlap 53854 TTTAAATAATAATTT TATGACA TGGA TGTCATG TTTATTTATATTTAC ruvB 54061 - 55059 + | Holliday junction DNA helicase B TERM 59 55482 - 55472 - g 75 -5.4 -4.6902 | overlap 55481 CGATAATGTGAAAAA TCTC AAA GAGA TGTCGCAACATCAAT SpyM50036 55197 - 55634 + | putative phosphotyrosine protein phosphatase SpyM50037 55657 - 56058 + | hypothetical protein TERM 60 56230 - 56242 + G 71 -4.1 -5.00616 | overlap 56231 CAAAAAAAGAGTCTA TCGAT ATT ATCGG TTTTTTAAAAAGACG TERM 61 57034 - 57048 + G 70 -2.8 -5.11836 | overlap 57036 TGTCTCATATTTTGG CAGTTA TTC TAACAG TTTTCTTTTCAATCT SpyM50038 56055 - 57830 + | acyltransferase family protein TERM 62 57937 - 57958 + F 77 -2.9 -5.51402 | opp_overlap 57937, overlap 57926 GGTTTTTAAAAGAAA GCGGTTTCG GAAA CAAAACGGC TTTTTTTAGATATAT TERM 63 57958 - 57937 - f 71 -5.1 -4.64861 | opp_overlap 57937 57926 GGTTTTTAAAAGAAA GCGGTTTCG GAAA CAAAACGGC TTTTTTTAGATATAT TERM 64 58057 - 58037 - f 88 -4.8 -5.48303 | opp_overlap 58037, overlap 58038 ATAATTTGAAAAAAA CTTCACAA ATTTA TTGTGAAA TGATTTACAAAATTT adhE 58139 - 60781 + | bifunctional acetaldehyde-CoA/alcohol dehydrogenase TERM 65 60836 - 60805 - f 93 -11.9 -3.81951 | opp_overlap 60805 GTTGATACCAGGAAA TGATTTCTTATGA TTAAAG TCATAAGAAATCA TTTTATTTTCTAAAT TERM 66 60805 - 60836 + F 100 -12.6 -5.19275 | opp_overlap 60805 GTTGATACCAGGAAA TGATTTCTTATGAT TAAA GTCATAAGAAATCA TTTTATTTTCTAAAT adhP 61033 - 62049 + | alcohol dehydrogenase TERM 67 62160 - 62106 - f 90 -11.9 -3.61371 | gap 2, opp_overlap 62111, overlap 62111 AAACTTGATTCCAAA TAAAATAGCACTCTCGAGTATCAGAAA ACA TTTTTGA--CTCGAGAGTGCTATTTTG ATACATTGAAAGTTG TERM 68 62111 - 62155 + F 100 -14 -4.30978 | gap 2, opp_overlap 62106 62111 TGATTCCAAATAAAA TAGCACTCTCGAGTATCAGAAA ACA TTTTTG--ACTCGAGAGTGCTA TTTTGATACATTGAA TERM 69 62155 - 62111 - f 100 -11.8 -4.88918 | gap 2, opp_overlap 62111, overlap 62106 TGATTCCAAATAAAA TAGCACTCTCGAGTATCAGAAA ACA TTTTTGA--CTCGAGAGTGCTA TTTTGATACATTGAA SpyM50041 62437 - 63726 + | MATE family transporter TERM 70 63791 - 63775 - f 70 -2.9 -5.18357 | opp_overlap 63778, overlap 63776 63778 63787 TAAGGTATGAAAAAA GCACCTC TAA GAGGTAT ACTTGTAGTTCACCA TERM 71 64621 - 64581 - f 100 -18.4 -3.14211 | ATGTCGTTCCAGTAA GTGCCTCTCTCCCATCCC TATGC GTCATGGGAGAGAGGCAC TAACGAAAACCATAA TERM 72 64698 - 64675 - f 75 -7.4 -4.33165 | CTAAAGGTACCAAAA CAACGACCCC TAAA GAAGTCGCTG CTATTGAACATTGGA TERM 73 64796 - 64811 + F 70 -5.4 -4.52949 | opp_overlap 64810 CAACTTGAAATTTGG CCTTTC ATTA GGAAGG TATTTTTTTTGAAAA rpsJ 65004 - 65312 + | 30S ribosomal protein S10 TERM 74 65416 - 65426 + F 81 -4 -5.49568 | CAGAAGTTTTTGTGT TAGA TTT TCTA TTTTTATTTTGAGTT TERM 75 65501 - 65477 - f 73 -2.1 -5.32882 | overlap 65478 65490 65491 TATGAGCACAAAAAA CGCTCGTAAAA AAC TTTTTTGAGCA CAAAAAACGCTCATA TERM 76 66130 - 66102 - g 70 -5.4 -4.40358 | gap 1, overlap 66105 66121 AGTTATCCCAGAAAA GAACGTTATCCTT GTTA AAGG-TAACGTAC CAGGTGCTAAGAAAT TERM 77 66127 - 66105 - g 70 -5.7 -4.32067 | gap 1, overlap 66102 66121 TATCCCAGAAAAGAA CGTTATCCTT GTTA AAGG-TAACG TACCAGGTGCTAAGA rplC 65560 - 66186 + | 50S ribosomal protein L3 rplD 66210 - 66833 + | 50S ribosomal protein L4 TERM 78 66873 - 66860 - g 76 -3.1 -5.28481 | opp_overlap 66867, overlap 66861 GACGTAATCAAAAAA CCAGT TATC ACTGA GAAGTCAATGATTGC rplW 66833 - 67129 + | 50S ribosomal protein L23 rplB 67147 - 67980 + | 50S ribosomal protein L2 TERM 79 68224 - 68206 - g 84 -2.4 -5.83211 | GACGAAAAGAAAAAA GTAATCAA AAC TTGGTCAC GTCGTTCAACGATTT rpsS 68119 - 68397 + | 30S ribosomal protein S19 TERM 80 68455 - 68477 + G 79 -9.2 -3.86106 | overlap 68446 ATGGCTCGTACAGTG CGTGTTTCAC CTC GTAAAACACG TTTAGTACTTGATCT rplV 68413 - 68757 + | 50S ribosomal protein L22 rpsC 68770 - 69423 + | 30S ribosomal protein S3 rplP 69427 - 69840 + | 50S ribosomal protein L16 rpmC 69850 - 70056 + | 50S ribosomal protein L29 rpsQ 70082 - 70342 + | 30S ribosomal protein S17 rplN 70367 - 70735 + | 50S ribosomal protein L14 rplX 70814 - 71119 + | 50S ribosomal protein L24 rplE 71143 - 71685 + | 50S ribosomal protein L5 TERM 81 71792 - 71779 - g 79 -6.7 -4.56775 | opp_overlap 71779 ACTCGCTGTGAAAAA TGTGG ACGT CCACA TTCAGTTTACCGCAA rpsN 71701 - 71886 + | 30S ribosomal protein S14 TERM 82 71935 - 71890 - f 71 -5 -4.56597 | gap 1, opp_overlap 71894 71895 71897 71900 71902, overlap 71895 71897 71902 GCTTCTTGGTAAAAA TATGACACAAAACTTAATTTG TTCTT CAGATTAAGTCTTGTG-CTTA ATTAAAACGGTGTGA TERM 83 71895 - 71931 + F 76 -10.4 -2.60194 | opp_overlap 71890 71895 71897 71902, overlap 71894 71897 71900 71902 TTGGTAAAAATATGA CACAAAACTTAATTTG TTCTT CAGATTAAGTCTTGTG CTTAATTAAAACGGT TERM 84 71931 - 71895 - f 78 -10.4 -3.01831 | opp_overlap 71895 71894 71897 71900 71902, overlap 71890 71897 71902 TTGGTAAAAATATGA CACAAAACTTAATTTG TTCTT CAGATTAAGTCTTGTG CTTAATTAAAACGGT TERM 85 71981 - 71969 - f 74 -7.7 -3.84712 | TAAGCTGATACCAAA GTCCT TTA AGGAC AACATTAACTAGTAA rpsH 72037 - 72435 + | 30S ribosomal protein S8 rplF 72638 - 73174 + | 50S ribosomal protein L6 rplR 73279 - 73635 + | 50S ribosomal protein L18 TERM 86 73886 - 73870 - g 73 -9.5 -3.16564 | overlap 73862 AAAAACATGATCGAA GTACCAA TGG TTGGTAC AACAATCCCTCACGA rpsE 73654 - 74148 + | 30S ribosomal protein S5 rpmD 74163 - 74345 + | 50S ribosomal protein L30 rplO 74560 - 75000 + | 50S ribosomal protein L15 secY 75017 - 76321 + | preprotein translocase subunit SecY TERM 87 76324 - 76349 + F 78 -4.1 -5.2853 | gap 1, opp_overlap 76324 76326 76328, overlap 76319 76325 76328 TACAGCAGAATAGAA TACA-GGTTGAC ATT GTCAACCTTCTA TTTTGTTTTTAAATG TERM 88 76346 - 76326 - f 72 -8.3 -3.46859 | opp_overlap 76325 76324 76319 76328, overlap 76324 76328 CAGCAGAATAGAATA CAGGTTGAC ATT GTCAACCTT CTATTTTGTTTTTAA TERM 89 76328 - 76344 + F 90 -10.9 -4.1922 | opp_overlap 76326 76324 76328, overlap 76325 76324 76319 GCAGAATAGAATACA GGTTGAC ATT GTCAACC TTCTATTTTGTTTTT TERM 90 76344 - 76328 - f 82 -10.9 -3.29569 | opp_overlap 76328 76325 76324 76319, overlap 76326 76324 GCAGAATAGAATACA GGTTGAC ATT GTCAACC TTCTATTTTGTTTTT adk 76471 - 77109 + | adenylate kinase TERM 91 77147 - 77111 - f 73 -6.2 -4.51765 | gap 1, opp_overlap 77103 77111 77113 77120, overlap 77102 77112 77114 77120 TAGAACTCAAATAAA TTAT-ACTAATCTACTT GCAT AAGTAGATTAGTAATGA TATACTAGTTTAGTC TERM 92 77144 - 77112 - f 73 -8.8 -3.29975 | gap 1, opp_overlap 77111 77103 77113 77120, overlap 77102 77111 77114 77120 AGAACTCAAATAAAT TATACTAATCTACTT GCAT AAGTAGATTAGTA-A TGATATACTAGTTTA TERM 93 77113 - 77144 + F 76 -10.4 -2.69202 | opp_overlap 77102 77112 77111 77114 77120, overlap 77111 77103 77120 GAACTCAAATAAATT ATACTAATCTACTT GCAT AAGTAGATTAGTAA TGATATACTAGTTTA TERM 94 77143 - 77114 - f 100 -13.9 -3.20126 | opp_overlap 77113 77111 77103 77120, overlap 77102 77112 77111 77120 AACTCAAATAAATTA TACTAATCTACTT GCAT AAGTAGATTAGTA ATGATATACTAGTTT infA 77227 - 77445 + | translation initiation factor IF-1 rpmJ 77471 - 77587 + | 50S ribosomal protein L36 TERM 95 77815 - 77797 - g 71 -7.4 -3.93288 | GTGGATGCAATCAAA GTTGAAGG TGA CCTTCGAC GTGAAGTAAACATGA rpsM 77605 - 77970 + | 30S ribosomal protein S13 rpsK 77988 - 78371 + | 30S ribosomal protein S11 TERM 96 78889 - 78879 - g 79 -3.2 -5.5074 | overlap 78882 78884 GAAGGCAACAAAAAA GATG ATG CACC TGTGGGTACATTGGC rpoA 78417 - 79355 + | DNA-directed RNA polymerase subunit alpha rplQ 79370 - 79756 + | 50S ribosomal protein L17 TERM 97 79879 - 79929 + F 100 -12.9 -4.92791 | opp_overlap 79879 ATTGTTAATATGTAA CGCTTGTTTATGAAAGGTATCTA AGCTA TAGAAACTTTTTATAAGCAGGCG TTTTGTTGTATTATG TERM 98 79998 - 79984 - f 78 -8.6 -3.70437 | opp_overlap 79983 79981, overlap 79982 79989 AGCAAAACAATAACA CAGAAG CCT CTTCTG ATGCGTTTATAAAGT TERM 99 80137 - 80125 - f 78 -4.1 -5.41746 | overlap 80126 AATGTCCGAAAAAAA CTTGC ATC GCAAA CAGATGCTCAAACTA TERM 100 80341 - 80325 - f 70 -2.9 -5.18357 | opp_overlap 80328, overlap 80326 80328 80337 TAAGGTATGAAAAAA GCACCTC TAA GAGGTAT ACTTGTAGTTCACCA TERM 101 81253 - 81230 - g 83 -7.4 -4.75309 | CTAAAGGTAACAAAA CAACGACCCC TAAA GAAGTCGCTG CTATTGAACATTGGA SpyM50071 80380 - 81369 + | insertion sequence IS1239 putative transposase TERM 102 81636 - 81622 - f 90 -8.6 -4.65032 | GAAACGAGAAATAAA TCTGTC AGC GACAGA AGGAACGAGTAAGTT TERM 103 82676 - 82689 + F 70 -5.3 -4.43477 | ACATCCCGATGCCCG CTCTA GAGA TAGAG TTTTACTTCGGTACA TERM 104 83445 - 83400 - f 78 -7.7 -4.2558 | gap 1, opp_overlap 83407, overlap 83407 CACTTCCTAGGAAAA TAGACAATCTTCCCTTGTGTGC AAG GCACACATGGTCAGATT-CCTA ATTTTCTACAGAAGT TERM 105 83407 - 83439 + F 73 -9.1 -3.3972 | opp_overlap 83400 83407 TAGGAAAATAGACAA TCTTCCCTTGTGTGC AAG GCACACATGGTCAGA TTCCTAATTTTCTAC TERM 106 83439 - 83407 - f 80 -9.1 -3.84985 | opp_overlap 83407, overlap 83400 TAGGAAAATAGACAA TCTTCCCTTGTGTGC AAG GCACACATGGTCAGA TTCCTAATTTTCTAC TERM 107 83919 - 83900 - f 90 -12.2 -3.62096 | opp_overlap 83899 83898 CGGCAGGAGGGCAAA CCGAAGTG TTTA CACTTCGG GGTTGTAGGACTGCG TERM 108 84611 - 84578 - f 70 -8.9 -3.03412 | overlap 84577 84600 CAATCTCAGATAAAC TCCGAATGCCAACGA GATA TCATCGGCAGTCAGA CTGCGAGTGCTAAGA TERM 109 87828 - 87859 + F 95 -10.4 -4.43012 | opp_overlap 87835, overlap 87826 87835 GGCCGCCGGTATACT TGAAAAACAAGGTT TGTA AACCTTGTTTTTTG TTTTGATCTTAGGCT TERM 110 87835 - 87852 + F 100 -8.5 -5.83211 | opp_overlap 87835, overlap 87826 87828 GGTATACTTGAAAAA CAAGGTT TGTA AACCTTG TTTTTTGTTTTGATC TERM 111 87852 - 87835 - f 88 -8.5 -4.64766 | opp_overlap 87826 87835 87828 GGTATACTTGAAAAA CAAGGTT TGTA AACCTTG TTTTTTGTTTTGATC TERM 112 88003 - 88016 + F 76 -4.5 -5.1287 | TTTGAAAAAGGTTTG GCACT ACTA GGTGC TTTTTTAACTATAGA TERM 113 88832 - 88846 + F 73 -7.2 -4.04474 | opp_overlap 88831 88834 GTTGACCATATAGAT GACAAT AAG ATTGTC TTTGTCTCAAACTGT TERM 114 89487 - 89471 - f 71 -4.5 -4.81249 | TGCCAAACCGAAAAA CAAACTA TAA TAGTTTA AAAGGACTTTGCAAG SpyM50075 89598 - 90041 + | MarR family regulatory protein TERM 115 90277 - 90246 - g 73 -2.4 -5.33985 | gap 1, opp_overlap 90255 90267, overlap 90249 90255 90265 GCTAAAAAAAATAAA GAC-GGTAAACAATT AAG AATTGCTTACTTGCC GCAGCAAGTAGCTAG SpyM50076 90045 - 90764 + | ABC transporter ATP-binding protein SpyM50077 90757 - 91572 + | ABC transporter permease protein TERM 116 91606 - 91582 - T 100 -10.1 -5.29445 | opp_overlap 91582 TTTTAATAAGAAAAA TCCTCACATGT TTA ATATGTGAGGA TTTATTTATAAATGC TERM 117 91582 - 91606 + T 100 -12.3 -4.57482 | opp_overlap 91582 TTTTAATAAGAAAAA TCCTCACATGT TTA ATATGTGAGGA TTTATTTATAAATGC TERM 118 91782 - 91809 + T 80 -10.6 -3.36878 | CTGAAATGGGAAGGT GCTGCTCTAGCT TAGC AACTAGAGCGGC TTGTAAGTCGATGAG TERM 119 92031 - 92018 - T 100 -8.1 -5.14563 | opp_overlap 92018 CTCCTTATGAAAAAA CGAGC CAGA GCTCG TTTAATCGGTTATCT TERM 120 92018 - 92031 + T 74 -8.1 -3.81259 | opp_overlap 92018 CTCCTTATGAAAAAA CGAGC CAGA GCTCG TTTAATCGGTTATCT tyrS 93301 - 92045 - | tyrosyl-tRNA synthetase TERM 121 93488 - 93506 + G 85 -2.5 -5.86465 | gap 1 GGTGCTATTACGTAC GTTGAGAC TACT GTCT-AAC TTTTTTTATATTGTT pbp1B 93405 - 95705 + | putative penicillin-binding protein 1B TERM 122 95790 - 95830 + F 79 -4.8 -5.1104 | opp_overlap 95790 95792, overlap 95792 TCCAGTTAGGAAGAA CAGCAGTTAAATCACACT GATAA AGTCAGATTTAGCTGCTC TTTTTGTGTCTATTT TERM 123 95792 - 95828 + F 73 -7.4 -4.15325 | opp_overlap 95792 95790, overlap 95790 CAGTTAGGAAGAACA GCAGTTAAATCACACT GATAA AGTCAGATTTAGCTGC TCTTTTTGTGTCTAT rpoB 95969 - 99535 + | DNA-directed RNA polymerase subunit beta rpoC 99626 - 103267 + | DNA-directed RNA polymerase subunit beta' TERM 124 103278 - 103293 + F 91 -6.8 -5.38951 | opp_overlap 103278 AATAATCTCATGAAA GAGTCC TTAG GGGCTC TTTTTTGTCTGAGTT SpyM50083 103419 - 103784 + | putative DNA binding protein TERM 125 103840 - 103814 - f 76 -6.8 -4.41817 | opp_overlap 103814, overlap 103809 CAAAATAAGTTAAAA GAAAATATCA CTTCTTC TGATATTTTC TTTTTTTGTTTACGA TERM 126 103814 - 103840 + F 93 -6.8 -5.95539 | opp_overlap 103814 103809 CAAAATAAGTTAAAA GAAAATATCA CTTCTTC TGATATTTTC TTTTTTTGTTTACGA TERM 127 103908 - 103898 - g 70 -5.4 -4.33105 | opp_overlap 103890, overlap 103899 CAAGTATTAGCAAAA GCTA TTC TAGC AAAAGCTGAACAGGT TERM 128 103958 - 103970 + G 91 -6.3 -5.42259 | opp_overlap 103958 ATTTTGCCAAGAGCA GATCA ATA TGATC TTTTTTTACGAATAG SpyM50084 103877 - 104815 + | putative competence protein TERM 129 104916 - 104902 - g 73 -5.7 -4.56597 | opp_overlap 104887 104906 104909, overlap 104906 TTGCTTTTTTAAAAA GAAGC CAGTT GCTTC AGCTAGATTATGTTC TERM 130 105333 - 105343 + G 73 -8.2 -3.81575 | TTGAAACTCTATAGT CGGC TAA GCCG TTATCCTTTTTTAGG SpyM50085 104799 - 105785 + | putative competence protein comYC 105787 - 106113 + | putative competence protein SpyM50087 106088 - 106516 + | putative competence protein SpyM50088 106521 - 106757 + | hypothetical protein SpyM50089 106750 - 107184 + | hypothetical protein SpyM50090 107168 - 107494 + | hypothetical protein SpyM50091 107592 - 108545 + | hypothetical protein TERM 131 108538 - 108549 + F 77 -3 -5.58179 | GGAAACTGAGTAATG TCAA TTAA TTGA TTTTTTGTTATAATA TERM 132 108615 - 108605 - g 75 -5.4 -4.6644 | AAGAGAGGTTAAAAA TGTC AAA GACA ATTGCAATTAATGCA ackA 108604 - 109800 + | acetate kinase TERM 133 109826 - 109850 + F 100 -9.4 -5.28826 | opp_overlap 109826 GTTTTCATAGATTAA CCAAGTAAGG CAACA CTTTACTTGG TTTTTTATGAGGTTT SpyM50093 109987 - 110295 + | hypothetical protein proC 111148 - 110378 - | pyrroline-5-carboxylate reductase pepA 112263 - 111196 - | putative glutamyl-aminopeptidase TERM 134 112388 - 112364 - R 100 -7.2 -5.58522 | overlap 112366 CACAGAAAAGAAAAA TCCCAGAGAC TAGAG ATCTCTGGAA GAAGTGTTTGTCTTT SpyM50095A 112537 - 112373 - | hypothetical protein SpyM50096 112728 - 113012 + | hypothetical protein TERM 135 113083 - 113105 + G 70 -9.8 -2.60206 | overlap 113082 113081 113085 GGTGTTATTTTTTAC GGCAGACTGG TGT CCAGACTGTC AATTTATTTATCCTA SpyM50097 113009 - 113326 + | putative thioredoxin SpyM50098 113344 - 113970 + | putative tRNA-binding protein TERM 136 114048 - 114009 - f 76 -10.2 -3.02881 | opp_overlap 114009 114019, overlap 114019 TATTTAACTAAATGA CCAGAAAAAAGGATTAGG ATCC CCTATTCCTTTTTTCTTA TGTTTTCAAAAACGT TERM 137 114038 - 114019 - f 91 -6.4 -5.33785 | opp_overlap 114009 114019, overlap 114009 AATGACCAGAAAAAA GGATTAGG ATCC CCTATTCC TTTTTTCTTATGTTT TERM 138 114019 - 114038 + F 93 -6.4 -5.66338 | opp_overlap 114019 114009, overlap 114009 AATGACCAGAAAAAA GGATTAGG ATCC CCTATTCC TTTTTTCTTATGTTT SpyM50099 114121 - 114516 + | single-strand DNA-binding protein SpyM50100 115417 - 114776 - | putative deoxyadenosine kinase protein SpyM50101 116414 - 115437 - | tRNA-dihydrouridine synthase TERM 139 116314 - 116290 - G 79 -9.3 -3.86944 | TCCATAACCACCAAA CCAGCACCAAA TTC TTTGGCGATGG TACGAAAGGCAGAGT hslO 117273 - 116401 - | Hsp33-like chaperonin TERM 140 117085 - 117102 + g 70 -3.4 -4.8622 | opp_overlap 117068, overlap 117068 ACCAATCACTTTGAC GGTGAT TTTACT ATCGCC TTTTTGATTAGCCGC rofA 118934 - 117399 - | RofA transcriptional regulator TERM 141 119823 - 119813 - g 73 -5.4 -4.55849 | GAAAACCCAAACAAA GAAC TAG GTTC TCCATATACTATAGA SpyM50104 119366 - 120937 + | putative surface-anchored protein TERM 142 121442 - 121420 - g 73 -5.7 -4.49716 | gap 1 AAATAAAAGGGAAAA TCTCAACTCT ATTA AGAGT-GAGA GGAATTTAAAAAAAT SpyM50105 120930 - 121451 + | putative signal peptidase TERM 143 122379 - 122368 - g 72 -4.4 -4.67635 | CTCAAAACCAGAAAA CAGA CGAA TCTG CTGACGAAATCGTTG SpyM50106 121458 - 122516 + | putative surface-anchored protein TERM 144 123167 - 123147 - g 73 -5.6 -4.56729 | AGTAAAAGATCAAAA CAATTTAA ACCTG TTAAATTG AAGCATCATACAAAG TERM 145 123192 - 123208 + G 71 -3.8 -4.91109 | ACAAAGTTCGTTGCT TTTTCA ACGTG TGAAAA TTTTTCTACTGACAA srtB 122517 - 123257 + | sortase B SpyM50106a 123274 - 123861 + | putative surface-anchored protein TERM 146 123922 - 123953 + T 95 -11.7 -4.58424 | opp_overlap 123918 AATGAAACTTATTGA CATCTCCATAGTC TTGCTT GACTTTGGAGATG TTTTCTATGCTGATA SpyM50109 125226 - 124021 - | AraC family transcription regulator TERM 147 125639 - 125658 + G 93 -9.4 -4.74598 | GCTATAAGTTAAGCT TCCTGTTA TCCC TAACAGGA TTTATTTTAGGTTTA SpyM50110 125608 - 127698 + | protein F2 like fibronectin-binding protein TERM 148 127728 - 127750 + T 95 -8.5 -4.85599 | gap 1, opp_overlap 127728 127729, overlap 127729 GACAATAGCGAAAAA G-GGTCCACT TGTT AGTGGACCTC TTTTTCTGGAATCGA TERM 149 127749 - 127728 - T 100 -8.7 -4.76312 | opp_overlap 127728 127729, overlap 127729 GACAATAGCGAAAAA GGGTCCACT TGTT AGTGGACCT CTTTTTCTGGAATCG TERM 150 127748 - 127729 - T 89 -12.2 -3.44703 | opp_overlap 127728 127729, overlap 127728 ACAATAGCGAAAAAG GGTCCACT TGTT AGTGGACC TCTTTTTCTGGAATC TERM 151 127729 - 127748 + T 93 -12.2 -4.05067 | opp_overlap 127729 127728, overlap 127728 ACAATAGCGAAAAAG GGTCCACT TGTT AGTGGACC TCTTTTTCTGGAATC TERM 152 127922 - 127893 - T 100 -10.2 -5.24416 | gap 1, opp_overlap 127916 CAAGCATAATAAAAA GAGTCTGAG-CAA TCATG TTGTCTCAGACTC TGACTGTAATTATGC SpyM50111 128629 - 127964 - | hypothetical protein TERM 153 128699 - 128677 - H 88 -5 -5.59357 | opp_overlap 128677 ATTATATCAAAAAAA CTAAAAAGTA AAT TATTTTTTAG TTTTTTATCATAATT TERM 154 128677 - 128699 + H 95 -7.2 -5.33785 | opp_overlap 128677 ATTATATCAAAAAAA CTAAAAAGTA AAT TATTTTTTAG TTTTTTATCATAATT TERM 155 129425 - 129436 + G 75 -5.8 -4.70887 | opp_overlap 129425 GCAAAAAGGGATTAA GGTG CATA CACC TTTGTTTGTTGCTAC SpyM50112 128982 - 130388 + | putative short-chain fatty acids transporter TERM 156 130406 - 130430 + T 85 -2.9 -5.79526 | gap 2, opp_overlap 130406 AATAACTACATGAAA CGCCTG--GGA TTGTT TCCTTCAGGCG TTTTTTTTAAGGTCT SpyM50113 131368 - 130457 - | LysR family regulatory protein atoB1 131489 - 132673 + | acetyl-CoA acetyltransferase 1 atoD1 132685 - 133344 + | acetate CoA-transferase alpha subunit 1 atoA1 133347 - 133994 + | acetate CoA-transferase beta subunit 1 SpyM50117 134796 - 134116 - | putative DNA-binding protein SpyM50118 134970 - 135335 + | endoribonuclease L-PSP family protein SpyM50119 135372 - 136391 + | hypothetical protein SpyM50120 136840 - 137163 + | hypothetical protein TERM 157 138636 - 138648 + G 78 -4.1 -5.27476 | overlap 138632 CGGCCTATACGTCAA GTCTA GCT TGGAC TTTTATTTTATTAGG ntpI 137153 - 139153 + | V-type ATP synthase subunit I ntpK 139155 - 139634 + | V-type ATP synthase subunit K TERM 158 139674 - 139664 - f 73 -3.2 -5.07567 | CTAGATTTTAAAAAA CGGT GGC ACCA CTAACACTATCAAAA ntpE 139702 - 140286 + | V-type sodium ATP synthase subunit E ntpC 140302 - 141300 + | V-type sodium ATP synthase subunit C SpyM50125 141297 - 141617 + | V-type ATP synthase subunit F TERM 159 141998 - 142026 + G 100 -14.7 -3.92641 | opp_overlap 142004 TCAGGGATCGGTCCA GGAGAACCAGTAG TGA CTACTGGTTGTCC TTTGTCGGTCGAGTT TERM 160 142020 - 142004 - g 80 -10.9 -3.40522 | opp_overlap 141998 ATCGGTCCAGGAGAA CCAGTAG TGA CTACTGG TTGTCCTTTGTCGGT TERM 161 142991 - 143007 + G 70 -8.7 -3.35224 | overlap 142989 GCCATCGGCGCGGTT TCTCCTC CTG GAGGGGA TATTTCAGAGCCTGT ntpA 141818 - 143593 + | V-type ATP synthase subunit A TERM 162 144497 - 144485 - g 72 -3.3 -5.03314 | CTGATCGGGAAAAAA GGGTC AGT GACTC AAATTCCTATTTTAA ntpB 143594 - 145009 + | V-type ATP synthase subunit B ntpD 145054 - 145680 + | V-type ATP synthase subunit D TERM 163 145731 - 145768 + T 73 -5.6 -4.66609 | gap 1, opp_overlap 145731 TTAAGTAGTAAAAAA GCAAGCCATCA-AAGGG ATTAA CCTAACTGATGGCTTGC TTTTTAAGTAGCGTG TERM 164 145768 - 145731 - T 86 -6.5 -5.2189 | gap 2, opp_overlap 145731 TTAAGTAGTAAAAAA GCAAGCCATCAA--AGG GATTAA CCTAACTGATGGCTTGC TTTTTAAGTAGCGTG SpyM50129 147062 - 145800 - | hypothetical protein SpyM50130 147953 - 147075 - | hypothetical protein TERM 165 149296 - 149310 + G 70 -7.8 -3.6187 | overlap 149297 TACGACAACAGGTCG TCCACG TCG CGTGGG TTGGTTTGATTCGGT purA 148391 - 149683 + | adenylosuccinate synthetase TERM 166 149702 - 149724 + F 83 -7 -4.7339 | opp_overlap 149702 GTCTAGTATGACAAA GAGTTGGATA GCG TTTCCAGCTC TTTTTACCGTTTGTT TERM 167 150497 - 150485 - g 72 -3.4 -5.09245 | opp_overlap 150485 CTAAAACGACAAAAA CCAA GCAAG TTGG TTTTGTAGGTGGTAT SpyM50132 150010 - 151053 + | basic lipoprotein TERM 168 151068 - 151097 + F 100 -10.1 -4.72986 | opp_overlap 151067 AAACTGTACAATACC GTCCAGAGTCG TCACGAAC CGACTTTGGAC TTTTTAATAAAGGTG TERM 169 151136 - 151150 + F 75 -5.7 -4.81212 | opp_overlap 151109 CTCCACAGATACGTT GACAG CAGCC CTGTC TTTTATTATAATGAA nusG 151227 - 151766 + | transcription antitermination protein NusG TERM 170 151776 - 151806 + F 100 -14.2 -5.26875 | opp_overlap 151776 CTATAGGCTCTCAAA GGTCTGATGGTA TAAATAT TACCATCAGACC TTTTTTAGTTGGCAG TERM 171 151806 - 151776 - f 100 -14.2 -3.55071 | opp_overlap 151776 CTATAGGCTCTCAAA GGTCTGATGGTA TAAATAT TACCATCAGACC TTTTTTAGTTGGCAG TERM 172 152698 - 152680 - g 74 -6 -4.43844 | opp_overlap 152694 CCATCAGGGACAAAA CAAGGATA TTT TAGCCTTG TCAGAGGTCACTTTT nga 152138 - 153493 + | NAD glycohydrolase SpyM50135 153627 - 153983 + | hypothetical protein TERM 173 153987 - 153976 - f 74 -3 -5.40014 | overlap 153970 AAAGAACAATAAAAA CATT TTAG AATG ATAAAAAGGTATGAA TERM 174 154397 - 154387 - g 73 -5.4 -4.58663 | AGTACTTGCTAAAAA TGGT GAA ACCA TTGAAAATTTTGTTC slo 153998 - 155722 + | streptolysin O precursor (thiol-activated cytolysin) TERM 175 155839 - 155809 - T 100 -12.8 -5.51046 | opp_overlap 155809 CAAATACAGAAAAAA GCTTGTCTATGA GATACCT TCATAGACAAGC TTTGTTATAACTGTT TERM 176 155809 - 155839 + T 100 -13.5 -4.35091 | opp_overlap 155809 CAAATACAGAAAAAA GCTTGTCTATGAG ATACC TTCATAGACAAGC TTTGTTATAACTGTT SpyM50137 156103 - 155861 - | hypothetical protein TERM 177 156016 - 156029 + g 76 -3.1 -5.27779 | CTACTGCCTCATTTG CCGAA ACAG TTTGG TTTTTTGGTGTTGCA TERM 178 156357 - 156367 + r 74 -4.6 -4.90471 | TTCTCTCCTTTTATA GGCG GTG TGCC TTTTCTCTTTTACCT TERM 179 156449 - 156422 - R 100 -20 -4.88407 | opp_overlap 156422 TTAGCCAATCAAAAA GCCTAAGGCTGC ATAA GCAGCCTTAGGC TTTTCATAACCGTAG TERM 180 156422 - 156449 + r 100 -20 -4.26076 | opp_overlap 156422 TTAGCCAATCAAAAA GCCTAAGGCTGC ATAA GCAGCCTTAGGC TTTTCATAACCGTAG SpyM50138 156671 - 156504 - | hypothetical protein SpyM50139 157122 - 156856 - | hypothetical protein SpyM50140 157606 - 158745 + | putative cystathionine beta-lyase TERM 181 158727 - 158738 + F 71 -4.4 -4.75356 | ATTGGCCGATTTTGA GCAA GCAC TTGC TTTTTAAGTCTATTT TERM 182 158755 - 158788 + F 100 -10.3 -5.83226 | overlap 158756 TTTTAAGTCTATTTG TCCAGATTGGCTCTG TTTA CAGAGCAAGTCTGGC TTTTTTTATTAGCTT TERM 183 158756 - 158787 + F 100 -13.8 -4.07495 | overlap 158755 TTTAAGTCTATTTGT CCAGATTGGCTCTG TTTA CAGAGCAAGTCTGG CTTTTTTTATTAGCT leuS 158957 - 161458 + | leucyl-tRNA synthetase TERM 184 161553 - 161576 + F 100 -14 -4.83593 | opp_overlap 161553 ACTCATCTAGAAAAA CCACAAGAAC GAAG GTTCTTGTGG TTTTTAATCGTTGTT TERM 185 161576 - 161553 - f 100 -14 -4.88067 | opp_overlap 161553 ACTCATCTAGAAAAA CCACAAGAAC GAAG GTTCTTGTGG TTTTTAATCGTTGTT TERM 186 161822 - 161791 - g 72 -8.8 -3.53811 | CCTAGCTCCCCTAAA CTGGTTCTCGCAAA ATAT TTTGCAAAACCCAG CGTTCTTTGTAGGTC TERM 187 162473 - 162489 + G 73 -7.3 -3.96696 | overlap 162483 ATTTTCCATGATACT GTTGTTG CGT CAGCAAC TTTGATGTTGGTCTT SpyM50142 161765 - 163198 + | ascorbate-specific PTS system enzyme IIC SpyM50143 163269 - 163547 + | sugar phosphotransferase system (PTS),lactose/cellobiose-specific family IIB protein SpyM50144 163670 - 164155 + | PTS system, 3-keto-L-gulonate specific IIA component ulaD 164246 - 164908 + | 3-keto-L-gulonate-6-phosphate decarboxylase SpyM50146 164913 - 165776 + | putative L-xylulose 5-phosphate 3-epimerase araD 165778 - 166482 + | L-ribulose-5-phosphate 4-epimerase TERM 188 166556 - 166578 + G 89 -9.9 -4.19258 | TGTTAATCATTGTTT GGGCAAGTC CTTTT GACTTGTCC TTTTCGATGAACTGT SpyM50147A 166540 - 166686 + | hypothetical protein TERM 189 167863 - 167881 + G 80 -2.4 -5.65513 | overlap 167865 TGTAAGGCGCTCGTT TACCGTAA AGC TTATGGGA TTTTTTTAGTTAATC SpyM50148 166807 - 168453 + | putative transcriptional antiterminator TERM 190 168676 - 168658 - f 71 -9 -3.19568 | overlap 168657 TCATTGACAAGAAAG TCTATACT TAA AGTATAGA AACGAAGAACAAATT SpyM50149 168706 - 169797 + | putative L-ascorbate 6-phosphate lactonase SpyM50150 170285 - 171481 + | putative glycine betaine transport ATP-binding protein TERM 191 171721 - 171710 - g 89 -5.8 -5.4505 | opp_overlap 171684 CTTGCTAAGAAAAAA TGGC CTTT GCCA ACCTTTACCTTGTTA TERM 192 172357 - 172346 - g 81 -5.8 -5.11112 | overlap 172352 AAACCTCAAGAAAAA GCCA AAGC TGGC AAAACCAATAAATGG SpyM50151 171497 - 173224 + | putative glycine-betaine binding permease protein TERM 193 173254 - 173273 + F 100 -8.6 -4.74103 | opp_overlap 173247 173254 ATAGCAAATAGAGAA GTCTAGGA ATTT TCCTAGGC TTTTTAGGTTAACCA pol 173355 - 175997 + | DNA polymerase I SpyM50153 176175 - 176630 + | putative CoA binding protein SpyM50154 176682 - 177149 + | ferric uptake regulator family protein TERM 194 177191 - 177164 - T 75 -8.6 -3.61268 | opp_overlap 177168, overlap 177156 177168 GAGTTAACCCTTAAA TAAAGGCATTAT AAAT ATAGTGCCTTTA CAAATCAAAAACCCC TERM 195 177226 - 177203 - T 72 -3.8 -5.04601 | gap 1, opp_overlap 177203 TTTACAAATCAAAAA CCCCCAGTTCA TTT TGG-CTGAGGG CTATTTTTATGGATG SpyM50155 178115 - 177252 - | hypothetical protein SpyM50156 178152 - 178337 + | hypothetical protein TERM 196 178389 - 178378 - g 79 -5.8 -4.91977 | TATCAAAACAGAAAA GCAC ACCG GTGC ACGCTTGGGCGAAAT tgt 178334 - 179476 + | queuine tRNA-ribosyltransferase TERM 197 179493 - 179530 + F 100 -12.1 -5.71712 | TAAAAATGCTATGAT CCTGGAACTGAGGGCGA TCTA TCGTCTTTGGTTTCAGG TTTTTTTGTGTAGAC SpyM50158 179694 - 180005 + | CHY zinc finger protein SpyM50159 180009 - 180548 + | BioY family protein TERM 198 180580 - 180611 + F 100 -16 -4.76041 | opp_overlap 180582 TTAAGTTGTGTTGAA CAGGTCTTGGCAGA TTTA TCTGCTAGGACCTG TTTTTGGTGGGTCTC SpyM50160 180688 - 181467 + | metallo-beta-lactamase superfamily protein SpyM50161 181467 - 181940 + | putative deaminase TERM 199 182108 - 182134 + T 71 -5.1 -4.56775 | opp_overlap 182103 182108 182110 ATAGAATATACAAAA GGGCGTTTCCA AGTAC TAGAAGCGCTC TTTTTCAGACCCAAT SpyM50162 183827 - 182595 - | putative lipoprotein TERM 200 182696 - 182684 - G 71 -6.3 -4.20932 | opp_overlap 182682 182684 AATACTGATTGAAAA GGTTA TGA TAACC TGTTTGATTCGTCGT TERM 201 183286 - 183296 + g 83 -3.2 -5.58179 | CTGCCTGATTGATAG GCTT CAA AGGC TTTTTTATTGTAGTC SpyM50163 183869 - 183976 + | hypothetical protein TERM 202 183969 - 183982 + T 70 -5.3 -4.4959 | AAAATGAAGCTATGC TCACT TGAA AGTGA TTTTACTTAGTTGGA SpyM50164 185221 - 184223 - | insertion sequence IS1239 putative transposase TERM 203 184348 - 184371 + g 83 -7.4 -4.75309 | TCCAATGTTCAATAG CAGCGACTTC TTTA GGGGTCGTTG TTTTGTTACCTTTAG TERM 204 185260 - 185276 + H 70 -2.9 -5.18357 | opp_overlap 185263, overlap 185246 185261 185263 TGGTGAACTACAAGT ATACCTC TTA GAGGTGC TTTTTTCATACCTTA SpyM50166 186102 - 186221 + | hypothetical protein TERM 205 186238 - 186249 + F 90 -7.2 -5.2112 | opp_overlap 186237 TTATTAAGGTAAAGC GGCC TCAG GGCC TTTTTTCATGATATT TERM 206 186946 - 186956 + G 70 -5.4 -4.41047 | TATTGCCTTTCGCGT GTTC AAA GAAC TTTTGGTTAAAAAAT pgi 186473 - 187822 + | glucose-6-phosphate isomerase TERM 207 187983 - 187936 - T 100 -18.1 -4.43309 | gap 1, opp_overlap 187943 187947, overlap 187940 CAAGGTTAAGTAAAA GCGATAATAAAGTGCGCTTCCA GAACA TGGGAGCGCACTTTATTAT-GC CAAATTTCAGATAAG TERM 208 187980 - 187940 - T 100 -18.6 -2.80479 | opp_overlap 187943 187947, overlap 187936 GTTAAGTAAAAGCGA TAATAAAGTGCGCTTCCA GAACA TGGGAGCGCACTTTATTA TGCCAAATTTCAGAT TERM 209 187943 - 187977 + T 100 -18.1 -3.32294 | opp_overlap 187940 187936, overlap 187947 AAGTAAAAGCGATAA TAAAGTGCGCTTCCA GAACA TGGGAGCGCACTTTA TTATGCCAAATTTCA TERM 210 187947 - 187973 + T 100 -14.5 -4.30987 | opp_overlap 187940 187936, overlap 187943 AAAAGCGATAATAAA GTGCGCTTCCA GAACA TGGGAGCGCAC TTTATTATGCCAAAT SpyM50168 189678 - 188170 - | putative regulatory protein-RofA related TERM 211 189566 - 189547 - G 72 -9.4 -3.08088 | AAATTGTCGAAGATA CTGCTTTA TTTT TAAAGCAG TCAAAGTTGTTTGAG TERM 212 189936 - 189911 - H 95 -8.3 -4.81249 | opp_overlap 189911 TTTTAAATTTAAAAA CCTAACCAGCC GGTT AACTGGTCAGG TTTAAACAAGGGAGG TERM 213 189973 - 189950 - H 85 -12.5 -2.71101 | overlap 189947 GGTTTAAACAAGGGA GGGCACCTA AGAAGA TAGGTGCCC AGGAGATTTATGAAA SpyM50169 189983 - 190114 + | hypothetical protein TERM 214 190212 - 190195 - f 73 -3.5 -5.2112 | gap 1, opp_overlap 190195 190199, overlap 190199 AAGATGATGAAAAAA GAGATTCT CAA AGAA-CTC TTCTAGTCTTTACGA SpyM50170 190231 - 190338 + | hypothetical protein TERM 215 190569 - 190580 + G 80 -2.2 -5.64274 | overlap 190552 GATATTTATTCATAT TGGC TTTG GTCA TTTTTTTGTCAATGG SpyM50171 190366 - 191037 + | rhomboid family membrane protein TERM 216 191148 - 191093 - T 100 -18.8 -2.98761 | gap 1, opp_overlap 191096 191110, overlap 191110 AGTAGGATGAAACGA CTCAAAAACCATAAAAATAAGGAGGGA TTT TCCCTCCTTATTTTTATGGTTTT-GTT TTCTCTAGTGCTTTG TERM 217 191096 - 191146 + T 100 -26 -4.59027 | opp_overlap 191093 191110, overlap 191110 AGGATGAAACGACTC AAAAACCATAAAAATAAGGAGGGA TTT TCCCTCCTTATTTTTATGGTTTTG TTTTCTCTAGTGCTT TERM 218 191132 - 191110 - T 100 -15 -5.1286 | opp_overlap 191096 191110, overlap 191093 CAAAAACCATAAAAA TAAGGAGGGA TTT TCCCTCCTTA TTTTTATGGTTTTGT TERM 219 191110 - 191132 + T 100 -15 -5.10601 | opp_overlap 191110 191093, overlap 191096 CAAAAACCATAAAAA TAAGGAGGGA TTT TCCCTCCTTA TTTTTATGGTTTTGT hasC2 192035 - 191136 - | UTP--glucose-1-phosphate uridylyltransferase 2 TERM 220 191183 - 191208 + g 72 -9.1 -3.35046 | overlap 191181 GTTGGATGATGTAGG CTTTCAAGTCA TCTT TGACTTGAGGG TGTTTCAGGGCATAA TERM 221 191307 - 191295 - G 73 -7.7 -3.80862 | opp_overlap 191295 AAACTCACGAGCAAA GACAC GCT GTGTC TTATTGAGGGTATCA TERM 222 191295 - 191307 + g 70 -7.7 -3.64487 | opp_overlap 191295 AAACTCACGAGCAAA GACAC GCT GTGTC TTATTGAGGGTATCA TERM 223 191350 - 191360 + g 76 -6.8 -4.36508 | AGTTGAACTTCATTG CCTG CAC CAGG TTCTTGTTTTTCTAA TERM 224 191545 - 191572 + g 77 -7.8 -4.27441 | gap 1 TCCTCGTGAGGAACC CTCATGACGGCAA TAG TTGCAG-CATGAG TTTCTTCATAGTCAT gpsA 193084 - 192068 - | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase TERM 225 193242 - 193256 + H 73 -5.6 -4.57543 | CAGGTGAGCTGTTGT CATGGC TTT GCCCTG TTCTTTTTAGTTATT TERM 226 193272 - 193287 + H 71 -4.8 -4.59773 | opp_overlap 193284 193285, overlap 193286 TTCTTTTTAGTTATT TAAGTT CGGA AACTTA TTTTTAAAAATAAAG SpyM50174 193382 - 193831 + | MarR family regulatory protein SpyM50175 193824 - 195530 + | ABC transporter ATP-binding membrane protein SpyM50176 195533 - 197317 + | ABC transporter ATP-binding membrane protein TERM 227 197328 - 197345 + F 100 -8.4 -5.14563 | AATAGATGGTATCAG CTCCGC GTCTTA GCGGAG TTTTTTGGTGAACAA SpyM50177 197435 - 198202 + | hypothetical protein TERM 228 198217 - 198239 + F 74 -2.6 -5.31545 | ATGGCATGATTAAAA GTGGTCCGTT TAA AGTTGACCGC TTTTTTGCTATTCTT TERM 229 198335 - 198347 + G 73 -7.7 -3.80841 | AATTCGTGGTTTCGA GCTTG TTT CAAGC TTTACTAATCCTGAT dut 198312 - 198758 + | deoxyuridine 5'-triphosphate nucleotidohydrolase TERM 230 198787 - 198813 + F 73 -8.8 -3.31726 | opp_overlap 198775, overlap 198791 AAATGCTTATGACAG CAGACCTATTCT TTA AGAGTGGGTTTG TCTTGTCTAGGGGAG radA 198839 - 200200 + | DNA repair protein RadA SpyM50180 200388 - 200885 + | putative carbonic anhydrase TERM 231 200903 - 200918 + F 100 -9 -5.93252 | AGTAGCCAAGTTGTA GAGCTG AATT CAGCTC TTTTTTATTTTTAAA SpyM50181 201016 - 201726 + | hypothetical protein TERM 232 201743 - 201760 + F 81 -4.1 -5.44119 | opp_overlap 201738 201743 CAAAATAACATAAAA TCAGCTT TTTA GGGCTGA TTTTTTTCGCCTAAG gltX 201908 - 203353 + | glutamyl-tRNA synthetase TERM 233 203416 - 203439 + F 89 -6.1 -5.39755 | opp_overlap 203416 203419 GTCACGACAACGAAA GATTGAAGA TTAAGT TCTTCAGTC TTTTTTATCGTTATC fasB 203748 - 205094 + | sensor histidine kinase TERM 234 205237 - 205247 + F 70 -5.4 -4.4078 | opp_overlap 205244 TGCTAATATGATATT TGAC AAA GTCA TTTTGATTGACCAAC fasA 206377 - 207117 + | response regulator protein TERM 235 207173 - 207152 - f 78 -5.9 -4.77036 | opp_overlap 207152 207150 TTTTAGGACGAAAAA GCAACATTT CAGG AAATGATGC TCTTATTGAAGTATT TERM 236 207341 - 207331 - f 70 -5.4 -4.52589 | opp_overlap 207324 207331 GCTCGGCAGACAAAA TGAC GAT GTCA GTTGTCTTTGTTTGG TERM 237 207406 - 207393 - f 73 -9.5 -2.89138 | opp_overlap 207393, overlap 207392 AAATCAGTATTAAAG CCCGG CTTG CCGGG TTTTTTGATAGGTAA TERM 238 207393 - 207406 + F 100 -9.5 -5.1675 | opp_overlap 207392 207393 AAATCAGTATTAAAG CCCGG CTTG CCGGG TTTTTTGATAGGTAA rnpA 207657 - 208016 + | ribonuclease P TERM 239 208367 - 208351 - g 73 -2.2 -5.24129 | GCCCTTTACAAAAAA TATGGG GTTAA CCCTTA TGCCAGTCTCTTACC SpyM50188 208000 - 208809 + | membrane protein OxaA 1 precursor TERM 240 209411 - 209401 - g 70 -8.2 -3.7108 | ATTTGCAGATTGAAA CGCC AGA GGCG GGACGTGTGATTGGT SpyM50189 208821 - 209735 + | putative ssDNA-binding protein TERM 241 209749 - 209777 + F 100 -8.3 -5.36441 | AGATCCTAAAAAGAA TCTTTGGTAGTTA GTT TAGCTATCGAAGA TTTTTTGTATGACCA rpmH 210050 - 210184 + | 50S ribosomal protein L34 TERM 242 210210 - 210232 + F 81 -5.6 -5.15117 | opp_overlap 210210 TACAACTAAAGTAAA CCAAGAGT GCTCGAG GCTCTTGG TTTTTTAACGTTTTC TERM 243 210494 - 210484 - g 85 -6.8 -5.00851 | ACCAACCAAAGAAAA GCTC ATG GAGC AGTTAAAGGGTGGGA SpyM50191 210458 - 211162 + | N-acetylmannosamine-6-phosphate 2-epimerase TERM 244 212285 - 212313 + G 71 -7.5 -3.80174 | opp_overlap 212282, overlap 212299 212301 GGACCTAAAAATGTT GTTCGTACAGG TGCTTTC CCTGTAAGAAC TTCTTATGGGGATCT TERM 245 212301 - 212325 + G 77 -10.1 -3.34398 | opp_overlap 212282, overlap 212285 212299 TTCGTACAGGTGCTT TCCCTGTAAGA ACT TCTTATGGGGA TCTTTACAAAGACAA SpyM50192 211211 - 212530 + | N-acetylneuraminate-binding protein TERM 246 212580 - 212595 + F 95 -7.6 -5.40072 | overlap 212546 TGTCAAATGGTCACT GGAAAG GAGC CTTTCC TTTTTTTAGGAGAGA TERM 247 212676 - 212657 - g 81 -5.8 -5.09521 | gap 1, opp_overlap 212657 TCAATAAATTAAAAA TGAGA-GAG ACG CTCATCTCA TACGCTTTCTTAGCT SpyM50193 212635 - 213522 + | N-acetylneuraminate transport system permease protein SpyM50194 213535 - 214365 + | N-acetylneuraminate transport system permease protein SpyM50195 214522 - 215184 + | hypothetical protein nanH 215196 - 216110 + | N-acetylneuraminate lyase SpyM50197 216132 - 217070 + | ROK family protein TERM 248 217152 - 217198 + T 71 -7.4 -3.93963 | opp_overlap 217152, overlap 217160 ACGACCCTTTAAAAA GAAAACAACGCCCTTTTTGCTA TTG TAGTCTAAAGGTCGTTATTTTC TTTGTCAATAATAGT TERM 249 217198 - 217152 - T 81 -7.4 -4.58663 | opp_overlap 217152 217160 ACGACCCTTTAAAAA GAAAACAACGCCCTTTTTGCTA TTG TAGTCTAAAGGTCGTTATTTTC TTTGTCAATAATAGT SpyM50198 218011 - 217181 - | putative transcription regulator TERM 250 218885 - 218865 - g 87 -8.3 -4.59773 | overlap 218867 218883 GGTCACTTTCAAAAA GGCTCTTGA TAT TCAAGAGGC AGCGCAGCACTTGCC TERM 251 218883 - 218867 - g 70 -9.5 -2.61004 | overlap 218865 TCACTTTCAAAAAGG CTCTTGA TAT TCAAGAG GCAGCGCAGCACTTG SpyM50199 218263 - 219087 + | TatD related DNase SpyM50200 219080 - 219649 + | hypothetical protein ksgA 219763 - 220635 + | dimethyladenosine transferase TERM 252 220877 - 220888 + F 74 -4.4 -4.90266 | opp_overlap 220877 CTACCTCAAAAATCA TCAG TGAT CTGA TTTTTAGTTGATAAA engC 221059 - 221931 + | ribosome-associated GTPase TERM 253 222425 - 222409 - g 77 -5.1 -4.8543 | overlap 222410 GAATGTTTAGAAAAA GTGGCTA CCG TAGCCAA ATGGCGAGATGAAAA TERM 254 222424 - 222410 - g 72 -8.6 -3.50535 | overlap 222409 AATGTTTAGAAAAAG TGGCTA CCG TAGCCA AATGGCGAGATGAAA rpe 221941 - 222603 + | ribulose-phosphate 3-epimerase TERM 255 222677 - 222708 + G 83 -11 -3.72141 | opp_overlap 222677 GTCGGTATTGATAGA GGGAGCCTATTTTT ATTA GAAAATGGGCTTCC TTTGAATATGGCTGT thiN 222596 - 223228 + | putative thiamin pyrophosphokinase TERM 256 224280 - 224264 - g 82 -3.7 -5.52909 | overlap 224266 TAATATCCAAAAAAA TGCTGAT GAC ATCAGTA AAATTTTGGGCAATG SpyM50205 223230 - 224501 + | RmuC family protein SpyM50206 224491 - 225429 + | CMP-binding factor TERM 257 225487 - 225509 + F 100 -9.3 -4.77216 | opp_overlap 225489 TTTTGATGTGCTTAA CACTTATGA TGGTT TCATAAGTG TTTTTGGCTCTTGTT TERM 258 226414 - 226400 - g 78 -7.1 -4.36914 | TGTGTTTGCAGAAAA CGCTC AATCA GAGCG TGAGCAAATGACCTT TERM 259 226479 - 226469 - g 73 -5.4 -4.62783 | opp_overlap 226469, overlap 226456 GATTGATGTCAAAAA CAAC AAT GTTG TTGTAGAAGTTGGTA purR 225696 - 226535 + | purine operon repressor SpyM50208 226526 - 229147 + | putative membrane anchored protein TERM 260 229199 - 229229 + F 83 -6.3 -5.1166 | gap 1, opp_overlap 229199 TCTATTTGACATGAA GTACCGTCT-GTGT TATT ATATTAGACGGTAC TTTTTACTTTTGGTC rpsL 229355 - 229768 + | 30S ribosomal protein S12 rpsG 229789 - 230259 + | 30S ribosomal protein S7 TERM 261 230668 - 230688 + F 100 -9.7 -4.75372 | opp_overlap 230668 CAAATATTTAGATAA CGGGTAGGT CCT GCCTATCCG TTTTTGCTAAATAGT TERM 262 231321 - 231297 - g 77 -8 -4.16443 | opp_overlap 231297 231295 AGATGAAAGCAGAAA TCTATACCAA CGACC TTGGTACAGA TATTCTTGAAGAAGA fus 230744 - 232822 + | elongation factor G TERM 263 232827 - 232814 - f 74 -4.5 -5.06961 | overlap 232823 232826 ATTAAGAAAAACAAA GGTGA ATAA CCACC ACTAAGAGGTTGAGG TERM 264 232859 - 232833 - f 71 -8.9 -3.2613 | gap 1, opp_overlap 232833, overlap 232826 232823 AATAACCACCACTAA GAGGTTGAGGAT AACT ATCCT-AACCTC TTTTTTAGTGTAACA TERM 265 232833 - 232859 + F 100 -8.9 -5.21709 | gap 1, opp_overlap 232826 232823 232833 AATAACCACCACTAA GAGGTTGAGGAT AACT ATCCT-AACCTC TTTTTTAGTGTAACA TERM 266 232957 - 232946 - f 77 -3 -5.53436 | opp_overlap 232946, overlap 232937 ACAGAATAGAAAAAA GAAA GCCC TTTC CTATATTTGGTGGGT gapA 233163 - 234173 + | glyceraldehyde-3-phosphate dehydrogenase TERM 267 234355 - 234329 - T 72 -3.8 -4.98522 | opp_overlap 234329 AACTGTATACAAAAA GGCTAAGA TGGAAGGGGTG TCTTAGCC TTTTTTTGTCTGACT TERM 268 234329 - 234355 + T 88 -5.2 -5.72616 | opp_overlap 234329 AACTGTATACAAAAA GGCTAAGATG GAAGGGG TGTCTTAGCC TTTTTTTGTCTGACT SpyM50213 234515 - 234399 - | hypothetical protein TERM 269 234488 - 234502 + g 85 -5.7 -5.26918 | TCAGTCTTCTGTAAG CTGAC GATAA GTCAG TTTTTTCTGCCATAT TERM 270 234649 - 234621 - R 70 -2.5 -5.15969 | overlap 234602 TTTGAATTGAAAAAA GACCCAACT GGCATAGAAAT AGTTGGATC CTTTATCTTATTTTA glnQ2 235397 - 234657 - | putative glutamine ABC transporter, ATP-binding protein 2 TERM 271 234941 - 234956 + g 73 -5.4 -4.57569 | CAGATAAGGCTCTGG CAATGG CAAC CCGTTG TTTTTGCCCCCCTGA SpyM50215 236958 - 235390 - | glutamine ABC transporter, glutamine-binding protein/permease protein TERM 272 236938 - 236950 + g 80 -6.3 -4.81551 | opp_overlap 236938 236936 CAAGGCGACCAAACA GCTAA GGA TTAGC TTTTTCATATAGGTC TERM 273 237902 - 237922 + G 71 -3.9 -5.00196 | opp_overlap 237904, overlap 237893 237906 GCTATTTGGCAAAGT CATTCCTCT GGT AGAGGTAGG TTTTCTTCTTTGGCA SpyM50216 237156 - 239081 + | hypothetical protein bacA 239147 - 239986 + | undecaprenyl pyrophosphate phosphatase TERM 274 240010 - 240033 + F 100 -12.4 -4.83759 | ATCGTTTAGGATGTT GCGACAGACC TTGG GGACTGTCGC TTTTTAAATTTCCTT TERM 275 240165 - 240148 - g 73 -5.6 -4.62772 | TGGAAATGAAACAAA TTAGCG AGACAA CGCTAA AAATAACAATTAGTA TERM 276 240261 - 240241 - g 82 -4 -5.4505 | TTCCTCAAGAAAAAA CAGAAGAG TTTTT CTATTCTG TGATGGACGAACTCG mecA 240132 - 240893 + | adaptor protein TERM 277 241532 - 241547 + G 85 -5.4 -5.33848 | overlap 241534 CATTTTGGTCTTGAT TTCTGC TATT GCAGGA TTTTTTCCTTATAAT rgpG 240900 - 242069 + | putative glycosyl transferase sufC 242191 - 242961 + | putative ABC transporter, ATP-binding protein sufD 243056 - 244318 + | hypothetical protein TERM 278 244563 - 244579 + G 71 -6.5 -4.2704 | AATATGAGGCCAGTC GCCAGCA GGT TGCTGAC TTTATTCATGCTAAA csdB 244349 - 245575 + | putative cysteine desulfurase iscU 245562 - 246041 + | NifU-like protein sufB 246034 - 247452 + | hypothetical protein TERM 279 247512 - 247529 + T 78 -5.6 -4.90013 | TTATGAGTTGTAGTA CTAACC CCAAGT GGTTAG TTTTTAGTTGCCTTA TERM 280 247556 - 247603 + T 78 -8.7 -3.65224 | opp_overlap 247559 247561 247570, overlap 247560 247561 247563 247570 CTTAAACACGTAAGA TAACATATCAAAAACCTCTGT GCTTTG ACAGAGGTTTTTGATAATTCA TTATTGGCGTCCCAT TERM 281 247600 - 247559 - T 86 -10.4 -3.7212 | opp_overlap 247556 247560 247561 247563 247570, overlap 247561 247570 AAACACGTAAGATAA CATATCAAAAACCTCTGT GCTTTG ACAGAGGTTTTTGATAAT TCATTATTGGCGTCC TERM 282 247560 - 247599 + T 100 -13.9 -3.54158 | opp_overlap 247559 247561 247570, overlap 247556 247561 247563 247570 AACACGTAAGATAAC ATATCAAAAACCTCTGT GCTTTG ACAGAGGTTTTTGATAA TTCATTATTGGCGTC TERM 283 247598 - 247561 - T 100 -17.4 -3.42884 | opp_overlap 247560 247556 247561 247563 247570, overlap 247559 247570 ACACGTAAGATAACA TATCAAAAACCTCTGT GCTTTG ACAGAGGTTTTTGATA ATTCATTATTGGCGT TERM 284 247561 - 247598 + T 100 -17.4 -2.72013 | opp_overlap 247561 247559 247570, overlap 247560 247556 247563 247570 ACACGTAAGATAACA TATCAAAAACCTCTGT GCTTTG ACAGAGGTTTTTGATA ATTCATTATTGGCGT TERM 285 247563 - 247596 + T 100 -15.6 -2.89971 | opp_overlap 247561 247559 247570, overlap 247561 247560 247556 247570 ACGTAAGATAACATA TCAAAAACCTCTGT GCTTTG ACAGAGGTTTTTGA TAATTCATTATTGGC TERM 286 247589 - 247570 - T 88 -7.9 -4.88711 | opp_overlap 247563 247561 247560 247556 247570, overlap 247561 247559 ATAACATATCAAAAA CCTCTGT GCTTTG ACAGAGG TTTTTGATAATTCAT TERM 287 247570 - 247589 + T 88 -7.9 -4.81685 | opp_overlap 247570 247561 247559, overlap 247563 247561 247560 247556 ATAACATATCAAAAA CCTCTGT GCTTTG ACAGAGG TTTTTGATAATTCAT SpyM50225 248785 - 247604 - | putative D-alanyl-D-alanine carboxypeptidase TERM 288 248263 - 248241 - G 71 -6.2 -4.16921 | opp_overlap 248241 248240 TAATAACCTTGAAAA GCTTGTGCTG CTG CACCACTAGC GTTTGAAAAATGAGT TERM 289 248924 - 248901 - R 86 -6.8 -5.24003 | gap 1 AATAAAAATGAAAAA GACTG-CAGAA GTA CTCTGTCAGTC AATGTCATACAAAAA TERM 290 248977 - 248960 - R 77 -8.5 -3.89346 | GTGTTATTCTATAAA GAGGTAT TGAC ATACCTC ACAAAACGGTTCCAC SpyM50226 250185 - 248953 - | putative D-alanyl-D-alanine carboxypeptidase TERM 291 249826 - 249810 - G 71 -9.5 -2.78679 | opp_overlap 249809 249808, overlap 249809 TTTTTTCAGCTAAAG CAATAGC GGG GCTATTG GCGTTATTAACAACT TERM 292 251792 - 251776 - g 73 -7.3 -4.09685 | GCTGAGTTTGCAAAA GCCAAAG AAG CTTTGAC AGCTGAAGGTGTAAC TERM 293 251953 - 251967 + G 73 -10 -2.78384 | opp_overlap 251952 251944 GAAACATCAACTCAC GAAGCC CAA GGCTTC TATGCTGAGACCCCA SpyM50227 250507 - 252486 + | putative extracellular oligopeptide-binding protein TERM 294 252541 - 252489 - f 81 -4.4 -5.26119 | gap 1, opp_overlap 252493 252493 252501, overlap 252492 252493 CGTTGAAAAATAAAA CGAT-GTTCAAAAGAACTTTCTC GTTTATGT GAGGGAGTTCTTTTGAACTATTG AGGACAACTATGAAA TERM 295 252493 - 252536 + F 100 -15.6 -3.01924 | opp_overlap 252492 252489 252493, overlap 252493 252501 GAAAAATAAAACGAT GTTCAAAAGAACTTTCTCGT TTAT GTGAGGGAGTTCTTTTGAAC TATTGAGGACAACTA TERM 296 252536 - 252493 - f 74 -9.8 -2.64578 | opp_overlap 252493 252493 252501, overlap 252492 252489 GAAAAATAAAACGAT GTTCAAAAGAACTTTCTC GTTTATGT GAGGGAGTTCTTTTGAAC TATTGAGGACAACTA TERM 297 253314 - 253300 - g 74 -4.3 -4.87665 | opp_overlap 253300, overlap 253307 CCGTAGCTACAAAAA TCCAA AATCA TTGGA TGATATCACCAAGGT SpyM50228 252551 - 254053 + | putative oligopeptide transporter permease protein SpyM50229 254053 - 254979 + | putative oligopeptide transporter permease protein SpyM50230 254988 - 256058 + | putative oligopeptide transporter ATP-binding protein TERM 298 256106 - 256088 - g 86 -10.4 -4.01564 | TAAAAGACCTAGAAA TTTCCTTC GGA GAAGGAAA GAAAAAATTTGTTGC SpyM50231 256051 - 256974 + | putative oligopeptide transporter ATP-binding protein TERM 299 257043 - 257053 + T 80 -6.8 -4.83677 | overlap 257022 GTTTTGTATTGTAGA GGAC TAA GTCC TTTTAGTTTTATTTT TERM 300 257165 - 257180 + T 73 -3.3 -5.2166 | AGAGCTCGTCTTTGT CCATT CTTTAT AATGG TTTTTTGCCTTCTTC TERM 301 257219 - 257232 + T 76 -2.3 -5.47218 | opp_overlap 257219 GATGCTTCTTTCAAA CGGAG TTCC CTCGG TTTTTTTAAGTAAGC TERM 302 257362 - 257372 + T 86 -5.4 -5.31072 | CTCTTGTTTTCTCAA CAGT ATA ACTG TTTTTCTTATATTAT SpyM50235 258611 - 258318 - | putative transposase TERM 303 258422 - 258467 + g 77 -4.8 -4.93316 | gap 1, opp_overlap 258431, overlap 258424 258431 TTATCTCAAATTGAG CAT-GACGAAGTGCGCTCCCA TGTCC TGGGAACGCACTTTCTCCATA TTTTTCATATTCTTG TERM 304 258424 - 258465 + g 73 -7.4 -4.06487 | gap 1, opp_overlap 258431, overlap 258422 258431 ATCTCAAATTGAGCA T-GACGAAGTGCGCTCCCA TGTCC TGGGAACGCACTTTCTCCA TATTTTTCATATTCT TERM 305 258457 - 258431 - G 95 -14.5 -3.23395 | opp_overlap 258424 258422 258431 ATTGAGCATGACGAA GTGCGCTCCCA TGTCC TGGGAACGCAC TTTCTCCATATTTTT TERM 306 258431 - 258457 + g 93 -12.3 -4.02468 | opp_overlap 258431, overlap 258424 258422 ATTGAGCATGACGAA GTGCGCTCCCA TGTCC TGGGAACGCAC TTTCTCCATATTTTT TERM 307 258982 - 258968 - H 90 -8.6 -4.65032 | GAAACGAGAAATAAA TCTGTC AGC GACAGA AGGAACGAGTAAGTT TERM 308 260022 - 260035 + H 70 -5.3 -4.43477 | ACATCCCGATGCCCG CTCTA GAGA TAGAG TTTTACTTCGGTACA TERM 309 260791 - 260746 - H 78 -7.7 -4.2558 | gap 1, opp_overlap 260753, overlap 260753 CACTTCCTAGGAAAA TAGACAATCTTCCCTTGTGTGC AAG GCACACATGGTCAGATT-CCTA ATTTTCTACAGAAGT TERM 310 260753 - 260785 + H 73 -9.1 -3.3972 | opp_overlap 260746 260753 TAGGAAAATAGACAA TCTTCCCTTGTGTGC AAG GCACACATGGTCAGA TTCCTAATTTTCTAC TERM 311 260785 - 260753 - H 80 -9.1 -3.84985 | opp_overlap 260753, overlap 260746 TAGGAAAATAGACAA TCTTCCCTTGTGTGC AAG GCACACATGGTCAGA TTCCTAATTTTCTAC TERM 312 261265 - 261246 - H 90 -12.2 -3.62096 | opp_overlap 261245 261244 CGGCAGGAGGGCAAA CCGAAGTG TTTA CACTTCGG GGTTGTAGGACTGCG TERM 313 261957 - 261924 - H 70 -8.9 -3.03412 | overlap 261923 261946 CAATCTCAGATAAAC TCCGAATGCCAACGA GATA TCATCGGCAGTCAGA CTGCGAGTGCTAAGA TERM 314 264160 - 264195 + H 74 -9.2 -3.04517 | opp_overlap 264169, overlap 264169 AGTCCTACTGGCGGA GTAGAAAGAGGTAGGA AGCG TCCTATCTTTTTTTGC ATTTTAGAGAAGAGT TERM 315 264169 - 264186 + H 91 -6.3 -5.61824 | opp_overlap 264169, overlap 264160 GGCGGAGTAGAAAGA GGTAGGA AGCG TCCTATC TTTTTTTGCATTTTA TERM 316 264350 - 264325 - g 100 -10.5 -5.32944 | opp_overlap 264326, overlap 264326 TGCATAATGAAAAAA GCAACAGGACA TTAG TGTCCTGTTGT TTTTTTGTGGTTCTC TERM 317 264349 - 264326 - g 95 -14 -3.78682 | opp_overlap 264326, overlap 264325 GCATAATGAAAAAAG CAACAGGACA TTAG TGTCCTGTTG TTTTTTTGTGGTTCT TERM 318 264326 - 264349 + G 100 -14 -5.73339 | opp_overlap 264326 264325 GCATAATGAAAAAAG CAACAGGACA TTAG TGTCCTGTTG TTTTTTTGTGGTTCT comX1 264309 - 264890 + | putative competence-specific global transcription modulator truA 265077 - 265826 + | tRNA pseudouridine synthase A TERM 319 266101 - 266113 + G 70 -9.1 -3.11922 | opp_overlap 266095, overlap 266098 266098 TTTATAAAGGGGCAT CTGGG AAT CCCAG TGGTTTTAGATCCTG thiD 265816 - 266580 + | phosphomethylpyrimidine kinase SpyM50239 266570 - 267040 + | hypothetical protein SpyM50240 267054 - 267614 + | hypothetical protein TERM 320 267663 - 267616 - T 86 -10.3 -3.71649 | gap 1, opp_overlap 267616 267617, overlap 267617 TCCGTAAATCCTAAA CCCTTTTTTCTGGAATAAAACA ATTGG TGTTTT-TTCTAGAAAAAAGGA TTTTTTAAGATTATA TERM 321 267616 - 267663 + T 100 -10.3 -5.11033 | gap 1, opp_overlap 267616 267617, overlap 267617 TCCGTAAATCCTAAA CCCTTTTTTCTGGAATAAAACA ATTGG TGTTTT-TTCTAGAAAAAAGGA TTTTTTAAGATTATA TERM 322 267617 - 267662 + T 100 -13.8 -3.65535 | gap 1, opp_overlap 267616 267617, overlap 267616 CCGTAAATCCTAAAC CCTTTTTTCTGGAATAAAACA ATTGG TGTTTT-TTCTAGAAAAAAGG ATTTTTTAAGATTAT TERM 323 267662 - 267617 - T 82 -11.6 -2.82668 | gap 1, opp_overlap 267617 267616, overlap 267616 CCGTAAATCCTAAAC CCTTTTTTCTGGAATAAAACA ATTGG TGTTTT-TTCTAGAAAAAAGG ATTTTTTAAGATTAT SpyM50241 268524 - 267679 - | mechanosensitive ion channel protein tig 268845 - 270128 + | trigger factor TERM 324 270155 - 270181 + F 100 -8.1 -5.69262 | opp_overlap 270155 AACAAAACGTACAAG CCGGATTAGAA CGTCT TTCTAGTCTGG TTTTTCTTTTTCTAA rpoE 270345 - 270920 + | DNA-directed RNA polymerase subunit delta TERM 325 271018 - 271042 + F 77 -2.8 -5.54907 | overlap 271020 TATGAGGTCAGGCAA AAGCTCTCTA GTTAA TAGGGGGCTA TTTTTGTTTTCTAGA TERM 326 271020 - 271040 + F 70 -5.4 -4.39746 | overlap 271018 TGAGGTCAGGCAAAA GCTCTCTA GTTAA TAGGGGGC TATTTTTGTTTTCTA pyrG 271177 - 272781 + | CTP synthetase TERM 327 272979 - 272991 + G 71 -6.3 -4.30809 | ATAGCAAAGTATTTA GGAAT TCT ATTCC TTTTGATAACTCTTA SpyM50245 272949 - 273875 + | hypothetical protein TERM 328 274023 - 274045 + F 100 -9.2 -5.38326 | opp_overlap 274023 CTCCGCATAATGTAA GAGGTGAATC ATT GATTCGTCTC TTTTTGTTTGGTTAA fba 274222 - 275103 + | fructose-bisphosphate aldolase TERM 329 275127 - 275140 + F 79 -5.2 -5.09225 | opp_overlap 275120 275127, overlap 275120 ACTAAATACCCTAAA GCCC CCTTGA GGGC TTTTTTAGATACAAT rpmB 275485 - 275673 + | 50S ribosomal protein L28 TERM 330 275670 - 275704 + F 70 -8.9 -3.08696 | gap 1, opp_overlap 275660 275669 275680, overlap 275669 TAAAGTAGAACGCAT CTAATAGAAATAAGCC TTAG GGCTT-TTTTTATTAG CTTATTTCTATCCAT SpyM50248 275825 - 276190 + | hypothetical protein SpyM50249 276190 - 277854 + | hypothetical protein TERM 331 277876 - 277897 + F 90 -7.3 -5.09685 | opp_overlap 277876 ACAATAAAAAAAGAG GAGTTAGGC AAAG GTCTGACTC TTTTTGTCTATATTG TERM 332 277971 - 277956 - f 70 -3.2 -5.03145 | TAAGCCCCTAAAAAA TGAGGG TAAT CCATCA CAAAGCTAATGGTTA SpyM50250 278091 - 278981 + | hypothetical protein SpyM50251 279211 - 280065 + | putative acid phosphatase pgk 280258 - 281454 + | phosphoglycerate kinase TERM 333 281479 - 281496 + F 100 -7.7 -5.65513 | opp_overlap 281478 281479 TAATATATAGTAAAG GGCATGC TGAT GCATGTC TTTTTTTAGTTGATC TERM 334 282090 - 282104 + G 91 -10 -4.56133 | AATCAGGTATTATTG GAGCAG TGG CTGCTC TTTTGATTATTACAC SpyM50253 281717 - 282268 + | hypothetical protein glnR 282335 - 282706 + | MerR family regulatory protein TERM 335 282890 - 282869 - g 80 -10.3 -3.63298 | opp_overlap 282867 282887, overlap 282867 TGCAACTAAAGAACA GTTAGACAA AGTA TTGTCTAAC AAGGTTATGTTTGAT glnA 282744 - 284090 + | putative glutamine synthetase TERM 336 284100 - 284122 + T 90 -10.6 -4.19258 | TATTAGACTTATCAG GACCTGCTCA AGT TGAGTGGGTC TTTTGGATGAGCTAT TERM 337 284194 - 284248 + T 75 -8.8 -3.50393 | opp_overlap 284185 284202 284209, overlap 284195 284197 284209 AATTGATTTTCCATT ATAGAAAACTAAAAACCAGTCCATGT TCT ATGAGGACTGGTTTTTAGTTTGATAA TTATCTGAACTAGAA TERM 338 284195 - 284247 + T 83 -12.3 -2.70022 | opp_overlap 284185 284202 284209, overlap 284194 284197 284209 ATTGATTTTCCATTA TAGAAAACTAAAAACCAGTCCATGT TCT ATGAGGACTGGTTTTTAGTTTGATA ATTATCTGAACTAGA TERM 339 284197 - 284245 + T 77 -10.5 -2.89298 | opp_overlap 284185 284202 284209, overlap 284195 284194 284209 TGATTTTCCATTATA GAAAACTAAAAACCAGTCCATGT TCT ATGAGGACTGGTTTTTAGTTTGA TAATTATCTGAACTA TERM 340 284240 - 284202 - T 100 -12 -4.57353 | opp_overlap 284197 284195 284194 284209, overlap 284209 TTCCATTATAGAAAA CTAAAAACCAGTCC ATGTTCTATGA GGACTGGTTTTTAG TTTGATAATTATCTG TERM 341 284233 - 284209 - T 76 -4.3 -5.15526 | opp_overlap 284197 284195 284194 284209, overlap 284202 ATAGAAAACTAAAAA CCAGTCC ATGTTCTATGA GGACTGG TTTTTAGTTTGATAA TERM 342 284209 - 284233 + T 85 -7.1 -5.01811 | opp_overlap 284209 284202, overlap 284197 284195 284194 ATAGAAAACTAAAAA CCAGTCCATGT TCT ATGAGGACTGG TTTTTAGTTTGATAA SpyM50256 286000 - 284318 - | Zn-dependent hydrolase TERM 343 284425 - 284438 + g 79 -6.7 -4.61482 | CACCGTTAACTGATT GGATG CTAG CATCC TTATTTTTTAAAGCA TERM 344 285881 - 285838 - G 79 -9.8 -3.63341 | gap 1, opp_overlap 285847, overlap 285847 AATAGTCTGGAATAA CGTAATCAA-TTCCCAAAAGA TCA TCTTCTGGGAATTTGATACCG GCATCAACGATAATG TERM 345 285871 - 285847 - G 87 -12.3 -3.43049 | opp_overlap 285847, overlap 285838 GAATAACGTAATCAA TTCCCAAAAGA TCA TCTTCTGGGAA TTTGATACCGGCATC TERM 346 285847 - 285871 + g 80 -10.1 -3.72893 | opp_overlap 285847 285838 GAATAACGTAATCAA TTCCCAAAAGA TCA TCTTCTGGGAA TTTGATACCGGCATC SpyM50257 286232 - 286002 - | hypothetical protein SpyM50258 286516 - 287214 + | glycoprotease family protein SpyM50259 287216 - 287641 + | acetyltransferase (GNAT) family protein SpyM50260 287631 - 288659 + | O-sialoglycoprotein endopeptidase TERM 347 288742 - 288715 - T 100 -14.3 -5.00616 | opp_overlap 288718 CTCCCTTTGAAAAAA CAACCCGGTAT CTTGGC ATACCGGGTTG TCATGATGATAAGTA TERM 348 288718 - 288739 + T 78 -10.2 -3.45023 | opp_overlap 288715 CCTTTGAAAAAACAA CCCGGTAT CTTGGC ATACCGGG TTGTCATGATGATAA rpsN 289099 - 288830 - | 30S ribosomal protein S14 TERM 349 289154 - 289186 + r 85 -12.2 -2.98729 | overlap 289155 TATCAGCGCTCTGAA TCCACTTAACTGGT ATTTA ACTGGTTAAGTGGA TATATAATCATTATA SpyM50262 290078 - 289320 - | GntR family regulatory protein udp 290318 - 291097 + | putative uridine phosphorylase SpyM50264 291118 - 292320 + | putative Na+ dependent nucleoside transporter deoC 292350 - 293021 + | deoxyribose-phosphate aldolase TERM 350 293107 - 293083 - T 91 -9.4 -4.70266 | opp_overlap 293083 AATAGGAGTTAAAAA GCCTACTATC TTAGT GATAATAGGC TTTTTTAGCTATGAA TERM 351 293083 - 293107 + T 90 -7.2 -5.1287 | opp_overlap 293083 AATAGGAGTTAAAAA GCCTACTATC TTAGT GATAATAGGC TTTTTTAGCTATGAA SpyM50266 294285 - 293116 - | hypothetical protein TERM 352 293328 - 293356 + g 76 -4.6 -5.093 | CTGTAATGGGTATTT GGAGGTGTTTGA GTTTA TCAAGCAATTCC TTTTCTTGTTTTGGA TERM 353 294167 - 294181 + g 83 -3.5 -5.53288 | GTTCCCGCTAATTTT TTGCC TAAGC GGCGA TTTTTTTCAATTAAG SpyM50267 294467 - 295018 + | putative DNA-binding protein TERM 354 295036 - 295050 + G 86 -7.8 -5.00616 | opp_overlap 295036 ACAAAAAATGACGAA GGCCCT ATC AGGGTC TTTTTTGGAGGAAAA SpyM50268 295028 - 295654 + | DNA polymerase III subunit epsilon SpyM50269 295806 - 296543 + | MerR family regulatory protein TERM 355 296588 - 296563 - T 100 -12.7 -5.66684 | opp_overlap 296563 TAACTCATAAAAAAA CTAGCCTGAGA TCCT TCTCAAGCTAG TTTTTGTTTTTTTAG TERM 356 296563 - 296588 + T 100 -10.5 -5.86609 | opp_overlap 296563 TAACTCATAAAAAAA CTAGCCTGAGA TCCT TCTCAAGCTAG TTTTTGTTTTTTTAG SpyM50270 296899 - 296600 - | hypothetical protein SpyM50271 297466 - 297092 - | putative DNA-binding protein TERM 357 297796 - 297822 + G 76 -2.2 -5.42259 | opp_overlap 297799, overlap 297798 297799 TAAAAGGTATTGCAC AAGCATTAGCGG TTT CCGTTGATGATA TTTTTTTAGGAATAG SpyM50272 297636 - 297857 + | putative DNA-binding protein TERM 358 297899 - 297932 + T 82 -7.6 -4.41302 | opp_overlap 297904, overlap 297904 TAAGACCAATTAACA AAAAAGTGCTTAGT TATATT GCTAAGCACTTTTC TTTGTTAATTTGATG TERM 359 297927 - 297904 - T 93 -6.8 -5.5604 | opp_overlap 297904 297899 CCAATTAACAAAAAA GTGCTTAG TTATATTG CTAAGCAC TTTTCTTTGTTAATT TERM 360 297904 - 297927 + T 93 -7.5 -5.13527 | opp_overlap 297904, overlap 297899 CCAATTAACAAAAAA GTGCTTAGT TATATT GCTAAGCAC TTTTCTTTGTTAATT pepXP 300219 - 297937 - | x-prolyl-dipeptidyl aminopeptidase TERM 361 299216 - 299228 + g 75 -5.5 -4.67353 | TTTGCCCAATCAGCT CTCAC TTG GTGGG TTTTTGAGTGGCTGG TERM 362 299474 - 299510 + g 87 -5.1 -5.41143 | opp_overlap 299483, overlap 299483 299486 GGCTGTGTCTCAAGA GGAATAAAATCCCTGTC TTC GACAGTGATTTGTCTCC TTTTTTTAACGACTA TERM 363 299483 - 299501 + g 76 -7.4 -4.24562 | opp_overlap 299483, overlap 299474 299486 TCAAGAGGAATAAAA TCCCTGTC TTC GACAGTGA TTTGTCTCCTTTTTT TERM 364 299501 - 299483 - G 83 -7.4 -4.78753 | opp_overlap 299483 299474 299486 TCAAGAGGAATAAAA TCCCTGTC TTC GACAGTGA TTTGTCTCCTTTTTT SpyM50274 300960 - 300241 - | Crp family regulatory protein TERM 365 301088 - 301078 - g 74 -4 -5.13741 | opp_overlap 301079, overlap 301079 TCAATGGAAGAAAAA TTGT TTA ACAA ACATTTTGTGGCCAT TERM 366 301885 - 301912 + G 76 -2.1 -5.42259 | gap 1, opp_overlap 301891, overlap 301890 301896 ATGGATGCTAAAGGC GATAA-ATGGGT CTTGT ACCCAAGTTATC TTTTTTTAGCAATGG SpyM50275 301066 - 302262 + | major facilitator transporter SpyM50276 302448 - 302564 + | hypothetical protein TERM 367 302566 - 302606 + F 72 -4 -4.97957 | opp_overlap 302566 302568 302570 ATACTATGAAATAAA GTGATAAAGATAAGGTCT TTTAT GGTCCTTTTCTTTACCGC TTTTATTATTGTGTG gla 302734 - 303582 + | glycerol facilitator-aquaporin TERM 368 303912 - 303885 - T 76 -4.9 -4.98616 | opp_overlap 303885 GTAAAATATTAAAAA CGTCTCTGG TTAGTGATTC CCAGAAACG TTATCTTATCTATTT SpyM50278 304814 - 303918 - | hypothetical protein TERM 369 304476 - 304464 - G 85 -9.1 -4.18702 | ATAAGCTCCAATAAA GGCTG CTG CAGCC ATAGCAAGTAAAGTT TERM 370 304781 - 304760 - G 80 -2.2 -5.67711 | overlap 304772 TAAAGAAAATAAAAA GCATTGCC GAAACT AGCAAAGC TTGTATCAGTCTAAG SpyM50279 305112 - 305864 + | hypothetical protein SpyM50280 305849 - 306799 + | putative beta-lactamase TERM 371 306946 - 306907 - T 100 -15.3 -5.1925 | opp_overlap 306907 TTATAAGTGAAAAAA GAATAGCCATCTCATTT TGAATC AAATGAGATGGCTGTTC TTTTTTATAAGTTAT TERM 372 306907 - 306946 + T 100 -17.5 -5.3236 | opp_overlap 306907 TTATAAGTGAAAAAA GAATAGCCATCTCATTT TGAATC AAATGAGATGGCTGTTC TTTTTTATAAGTTAT pfl 309306 - 306979 - | formate acetyltransferase TERM 373 308941 - 308967 + g 71 -6.5 -4.14511 | GCCGTTTTCTTTAAG GGTCGTTTCCG CCATA CGGATACCACC TTTTGGCATGAAGTT dinB 309515 - 310609 + | DNA polymerase IV TERM 374 310641 - 310696 + T 88 -8.39999 -4.63932 | opp_overlap 310653, overlap 310644 310653 310656 TCCGTCCGCCTCATT TTGGAGAAAAAAGAAGCTGATTAGGG ATTT CCCTAATCAGCTTCTTTGGTCCATTA TTTTATTACAGCATA TERM 375 310644 - 310693 + T 100 -12.3 -4.43307 | opp_overlap 310653, overlap 310641 310653 310656 GTCCGCCTCATTTTG GAGAAAAAAGAAGCTGATTAGGG ATTT CCCTAATCAGCTTCTTTGGTCCA TTATTTTATTACAGC TERM 376 310653 - 310684 + T 100 -20.4 -3.82531 | opp_overlap 310653, overlap 310644 310641 310656 ATTTTGGAGAAAAAA GAAGCTGATTAGGG ATTT CCCTAATCAGCTTC TTTGGTCCATTATTT TERM 377 310684 - 310653 - T 100 -20.4 -5.24531 | opp_overlap 310653 310644 310641 310656 ATTTTGGAGAAAAAA GAAGCTGATTAGGG ATTT CCCTAATCAGCTTC TTTGGTCCATTATTT TERM 378 310656 - 310681 + T 100 -16.3 -4.02571 | opp_overlap 310653, overlap 310653 310644 310641 TTGGAGAAAAAAGAA GCTGATTAGGG ATTT CCCTAATCAGC TTCTTTGGTCCATTA SpyM50283 311184 - 310702 - | hypothetical protein TERM 379 311154 - 311166 + g 74 -4.8 -4.7254 | TAGTAGACGTTTTGA GTGC CTGAC GCAC TTTTTCATAAGAAAT SpyM50284 313728 - 311275 - | hypothetical protein TERM 380 313779 - 313764 - R 90 -10.4 -4.35874 | opp_overlap 313764 CAAGATAACTGAAAA CCTGCC CAAA GGCAGG TTTTTTCTAATTAAA TERM 381 313764 - 313779 + r 100 -10.4 -5.37345 | opp_overlap 313764 CAAGATAACTGAAAA CCTGCC CAAA GGCAGG TTTTTTCTAATTAAA spi 314379 - 313786 - | putative signal peptidase I TERM 382 314347 - 314361 + g 73 -8.6 -3.76781 | opp_overlap 314346 AATTAAAAAGAGAGT GAATGG GCC CCATTC TTTAATAAACTGTTT SpyM50286 315292 - 314390 - | ribonuclease HIII TERM 383 314907 - 314917 + g 70 -2.6 -5.06451 | ATCTGTTGAATGGTT TTAT CCG ATAA TTTTTTAGAATCATC TERM 384 315487 - 315473 - g 77 -8.6 -3.89881 | ATTAATCGCTACAAA TTCACC TTT GGTGAA AAAACATTAACATTG SpyM50287 315449 - 315757 + | hypothetical protein SpyM50288 315760 - 316305 + | hypothetical protein TERM 385 316328 - 316357 + F 79 -7.3 -4.41348 | gap 1, opp_overlap 316328 TTGTGACTAATATAA GAACCTGGAG-TGA GTT TCACCTTTAGGTTC TTTATTTACGAGAAA mutS2 316454 - 318793 + | putative DNA mismatch repair protein SpyM50290 318797 - 319297 + | putative PAP2 superfamily protein SpyM50291 319378 - 319692 + | putative thioredoxin TERM 386 319731 - 319693 - T 100 -17 -3.09933 | opp_overlap 319694 319699 319703, overlap 319699 319703 GCTGAATTGAGTTAA CTAAAATAAAGCCCAGCG TCA CGCTGAGCTTTATTTTAT TATCTACTAACTTCA TERM 387 319694 - 319730 + T 100 -18.3 -3.56161 | opp_overlap 319693 319699 319703, overlap 319699 319703 CTGAATTGAGTTAAC TAAAATAAAGCCCAGCG TCA CGCTGAGCTTTATTTTA TTATCTACTAACTTC TERM 388 319725 - 319699 - T 100 -16 -4.43477 | opp_overlap 319694 319699 319703, overlap 319693 319703 TTGAGTTAACTAAAA TAAAGCCCAGCG TCA CGCTGAGCTTTA TTTTATTATCTACTA TERM 389 319699 - 319725 + T 100 -13.8 -4.85918 | opp_overlap 319699 319693 319703, overlap 319694 319703 TTGAGTTAACTAAAA TAAAGCCCAGCG TCA CGCTGAGCTTTA TTTTATTATCTACTA TERM 390 319721 - 319703 - T 100 -12.4 -4.78077 | opp_overlap 319699 319694 319703, overlap 319699 319693 GTTAACTAAAATAAA GCCCAGCG TCA CGCTGAGC TTTATTTTATTATCT TERM 391 319703 - 319721 + T 100 -10.2 -4.94168 | opp_overlap 319703 319699 319693, overlap 319699 319694 GTTAACTAAAATAAA GCCCAGCG TCA CGCTGAGC TTTATTTTATTATCT SpyM50292 320331 - 319744 - | putative DNA-binding membrane protein TERM 392 320501 - 320483 - R 86 -5.3 -5.29846 | opp_overlap 320483 AATTGTAAACAAAAA GTGAACC GTCAT AGTTCAC TTGTGATTAAACATT SpyM50293 321632 - 320508 - | putative A/G-specific adenine glycosylase TERM 393 320861 - 320851 - G 70 -3.2 -4.84363 | GGAAATGACCAAAAA CCTC CTA GAAG TCTCCCTTTAGTATT SpyM50294 321830 - 322123 + | hypothetical protein rpsF 322296 - 322586 + | 30S ribosomal protein S6 ssb 322608 - 323099 + | single-strand DNA-binding protein rpsR 323264 - 323503 + | 30S ribosomal protein S18 TERM 394 323512 - 323528 + T 95 -8 -5.32565 | opp_overlap 323508 323512 AGACTAATAAACCAA CAGTCC ATTTC GGACTG TTTTTTAGTTGATTA TERM 395 323528 - 323512 - T 78 -8.7 -3.71527 | opp_overlap 323512, overlap 323508 AGACTAATAAACCAA CAGTCCA TTT CGGACTG TTTTTTAGTTGATTA TERM 396 323622 - 323602 - T 81 -6.9 -4.6038 | GAGAGTAAACGAAAA TCCTTGC GTAGATA GCAAGGA TGAAATGATTGTTAT SpyM50298 324290 - 323634 - | hypothetical protein TERM 397 324033 - 324051 + g 71 -3.8 -4.95896 | opp_overlap 324039, overlap 324039 AGAGGTATCTAGCCA CATCAACC AAG GATTGGTG TTTTTGTCAGTTTCT SpyM50299 325367 - 324423 - | CorA-like Mg2+ transporter protein uvrA 325570 - 328398 + | excinuclease ABC subunit A TERM 398 328404 - 328421 + F 89 -7.7 -4.98616 | ACAACAATAGGATTA GGAGTTC GTTT GAGCTCC TTTTTAATCTTTTAA SpyM50301 328514 - 329587 + | Xaa-Pro dipeptidase SpyM50302 329622 - 330083 + | putative cytidine and deoxycytidylate deaminase efp 330179 - 330736 + | elongation factor P SpyM50304 330782 - 331171 + | hypothetical protein TERM 399 331209 - 331219 + G 76 -6.8 -4.44046 | GATTTGCGTGAACGT GCCT TTC AGGC TTTATTTAACATAGA nusB 331164 - 331616 + | transcription antitermination protein NusB TERM 400 331621 - 331647 + T 86 -6.7 -5.11033 | gap 1, opp_overlap 331621 ATAAATCATAATAAG TCGGA-GCAATC TTAG GATTGTATCCGA TTTTTTCAAGTTATG TERM 401 331729 - 331671 - T 100 -21.5 -3.15699 | opp_overlap 331677 331683, overlap 331677 331683 AGTTATGTACGAATA TTAAAAGACAAACAAGCATACTCTCGC ATCTA GAAAGAGTATGCTTGTTTGTCTTTTAG AGTAATTAGTGATTG TERM 402 331723 - 331677 - T 100 -20.5 -4.44797 | opp_overlap 331677 331683, overlap 331671 331683 GTACGAATATTAAAA GACAAACAAGCATACTCTCGC ATCTA GAAAGAGTATGCTTGTTTGTC TTTTAGAGTAATTAG TERM 403 331677 - 331723 + T 100 -18.3 -4.17023 | opp_overlap 331677 331671 331683, overlap 331683 GTACGAATATTAAAA GACAAACAAGCATACTCTCGC ATCTA GAAAGAGTATGCTTGTTTGTC TTTTAGAGTAATTAG TERM 404 331683 - 331717 + T 91 -10.1 -4.45771 | opp_overlap 331683 331677 331671, overlap 331677 ATATTAAAAGACAAA CAAGCATACTCTCGC ATCTA GAAAGAGTATGCTTG TTTGTCTTTTAGAGT TERM 405 331717 - 331683 - T 100 -12.3 -4.49352 | opp_overlap 331677 331683, overlap 331677 331671 ATATTAAAAGACAAA CAAGCATACTCTCGC ATCTA GAAAGAGTATGCTTG TTTGTCTTTTAGAGT scrR 332722 - 331757 - | putative sucrose operon repressor scrB 334166 - 332727 - | putative sucrose-6-phosphate hydrolase TERM 406 334275 - 334256 - H 76 -2.2 -5.58522 | CATATAAAATAAAAA TATGTTAA ACGC TTGACATA AAAAATATTAGTGAT scrA 334408 - 336291 + | PTS system, sucrose-specific IIABC component TERM 407 336325 - 336292 - f 100 -14.8 -4.015 | opp_overlap 336300, overlap 336300 GCACTTATCAAATAA GGACAAAAGAGCTA ACTAAG CAGCTCTTTTGTCC TGCCATGAATGGCAG TERM 408 338472 - 338458 - g 73 -7.8 -3.89085 | ACAAGCAAAAACCAA CTGGGC ATT ACCCAG ATACCTATGGGAAAA SpyM50309 336522 - 339494 + | endoglycosidase (EndoS) TERM 409 339626 - 339578 - f 100 -16.5 -2.52933 | opp_overlap 339578 339583, overlap 339583 339592 CTGGAATTGATTAAC CAAAAGACTAAAAATCTGAGA TGAATAG TCCCAGATTTTTAGTCTTTTA TAGGTTTTGATGACA TERM 410 339578 - 339626 + F 86 -12.8 -2.77781 | opp_overlap 339578 339583 339592, overlap 339583 CTGGAATTGATTAAC CAAAAGACTAAAAATCTGAGAT GAATA GTCCCAGATTTTTAGTCTTTTA TAGGTTTTGATGACA TERM 411 339621 - 339583 - f 100 -14.2 -4.45945 | opp_overlap 339578 339583, overlap 339578 339592 ATTGATTAACCAAAA GACTAAAAATCTGAGA TGAATAG TCCCAGATTTTTAGTC TTTTATAGGTTTTGA TERM 412 339583 - 339621 + F 100 -12.7 -4.54477 | opp_overlap 339583 339578 339592, overlap 339578 ATTGATTAACCAAAA GACTAAAAATCTGAGAT GAATA GTCCCAGATTTTTAGTC TTTTATAGGTTTTGA TERM 413 339612 - 339592 - f 70 -3.3 -4.98616 | opp_overlap 339583 339578, overlap 339583 339578 CCAAAAGACTAAAAA TCTGAGA TGAATAG TCCCAGA TTTTTAGTCTTTTAT scrK 339758 - 340642 + | fructokinase manA 340737 - 341690 + | mannose-6-phosphate isomerase TERM 414 341910 - 341899 - g 86 -4.4 -5.51165 | AAAATTGCAAAAAAA GTAG AATC CTAC GCAGATCAAATGGCG secA 341824 - 344343 + | preprotein translocase subunit SecA TERM 415 344376 - 344412 + F 91 -11.7 -3.79071 | opp_overlap 344382 344385, overlap 344378 ACAAAGTTAGGTATA TAGAAAGAAGCTGAGAA TAA TTCTCAGCTTCTCACTG TTTAAATCTTCTAAC TERM 416 344378 - 344410 + F 90 -12.1 -3.47542 | opp_overlap 344382 344385, overlap 344376 AAAGTTAGGTATATA GAAAGAAGCTGAGAA TAA TTCTCAGCTTCTCAC TGTTTAAATCTTCTA TERM 417 344406 - 344382 - f 100 -15.9 -4.1399 | opp_overlap 344378 344376, overlap 344385 TTAGGTATATAGAAA GAAGCTGAGAA TAA TTCTCAGCTTC TCACTGTTTAAATCT TERM 418 344403 - 344385 - f 91 -11.8 -4.18674 | opp_overlap 344378 344376, overlap 344382 GGTATATAGAAAGAA GCTGAGAA TAA TTCTCAGC TTCTCACTGTTTAAA acpS 344459 - 344815 + | 4'-phosphopantetheinyl transferase alr 344812 - 345912 + | alanine racemase TERM 419 346172 - 346160 - g 82 -4.1 -5.4593 | GGAAAATAATAAAAA TGCAG CAC CTACA ACATCAGATAAAACT TERM 420 346397 - 346372 - g 72 -8.3 -3.53298 | overlap 346354 346386 ATCATTCGAAACCAA CTGACCAGCCA AAAC CGACTGATCAG CCCAAACCATCACCA SpyM50315 345999 - 347528 + | putative amidase TERM 421 347631 - 347657 + F 100 -9.5 -6.17268 | opp_overlap 347636 AATAAATGATTTTGA GACAATAGCAC GATTA GGGCTATTGTC TTTTTTTTATTGTGA TERM 422 348270 - 348260 - g 85 -6.8 -5.14965 | ATGTCTATGAAAAAA GCCT GGA AGGC GAGCGAACCTTTGAT SpyM50316 348019 - 351846 + | putative iron transport-associated protein TERM 423 352420 - 352409 - g 72 -4.4 -4.70266 | AATATCACCCAAAAA GGTA CTGA TACC AATGGGACAACACTA SpyM50317 352043 - 352918 + | hypothetical protein SpyM50318 352902 - 353786 + | putative transport system extracellular binding lipoprotein TERM 424 354563 - 354583 + G 87 -8.3 -4.49958 | overlap 354550 TATTGGCTTCGGTAG CCACTTCGA TCG TTGGAGTGG TTTCTTTCCTAGGCT SpyM50319 353788 - 354810 + | putative iron/heme permease SpyM50320 354807 - 355643 + | ABC transporter ATP-binding protein SpyM50321 355640 - 357403 + | ABC transporter ATP-binding protein SpyM50322 357396 - 359066 + | ABC transporter ATP-binding protein SpyM50323 359063 - 359656 + | hypothetical protein SpyM50324 359653 - 360333 + | hypothetical protein TERM 425 360790 - 360777 - g 71 -6.7 -4.04587 | GGGCAAAAACAAAGA GTTGC TATT GCAAC GGCCATTATGCAAGG SpyM50325 360330 - 361724 + | ABC transporter ATP-binding protein TERM 426 361805 - 361783 - T 78 -9.3 -3.60072 | overlap 361779 GAAAATAAATAGGAA CTCTTGTAT AATAG ATACAAGAG TCAGAACGTAGACAA SpyM50325A 361902 - 361762 - | hypothetical protein TERM 427 361869 - 361879 + g 79 -6.8 -4.56597 | CTGCTGATTTGACAT TCGG TTT CCGA TTTTTACACACAAAG TERM 428 361927 - 361961 + H 81 -11.5 -2.60508 | opp_overlap 361929, overlap 361926 361925 TTTTTGCTGTGGTAA AAGAGTGGCGTCAAT ACGAG ATTGACGCCACTCGG GATTTTTGAGACCTC TERM 429 361959 - 361929 - H 100 -18.5 -4.07568 | opp_overlap 361927 361926 361925 TTTGCTGTGGTAAAA GAGTGGCGTCAAT ACGAG ATTGACGCCACTC GGGATTTTTGAGACC recG 362099 - 364114 + | ATP-dependent DNA helicase SpyM50327 364407 - 365309 + | ABC transporter ATP-binding protein SpyM50328 365322 - 366026 + | hypothetical protein TERM 430 366363 - 366322 - T 100 -16.2 -2.9587 | opp_overlap 366329, overlap 366329 TTAAAGCTTAAAGTA CTAGAAATGTCCCACTAA TATGTT TTAGTGGGACATTTCTAC AGGAAGCTAGATTAT TERM 431 366356 - 366329 - T 95 -12.9 -4.04209 | opp_overlap 366329, overlap 366322 TTAAAGTACTAGAAA TGTCCCACTAA TATGTT TTAGTGGGACA TTTCTACAGGAAGCT TERM 432 366329 - 366356 + T 95 -12.9 -3.85817 | opp_overlap 366322 366329 TTAAAGTACTAGAAA TGTCCCACTAA TATGTT TTAGTGGGACA TTTCTACAGGAAGCT asnB 367340 - 366375 - | L-asparaginase TERM 433 367970 - 367950 - g 70 -3.3 -4.84642 | CTGAAACTAAGAAAA TACAAGAGA AGT TCCCTCATA TAAAAATTACAAGAA SpyM50330 367412 - 368800 + | haloacid dehalogenase-like hydrolase SpyM50331 369429 - 368923 - | putative universal stress protein TERM 434 369405 - 369419 + g 83 -3.6 -5.68023 | opp_overlap 369405 TTAACAGTTTGACAA GAATAG CTT TTATTC TTTTTTTCATTATAC TERM 435 370587 - 370597 + G 71 -6.8 -3.99693 | opp_overlap 370587, overlap 370585 TTATCGGCAGTTAAA CCTG AAG CAGG TCTTTATTTATTTCC SpyM50332 369606 - 370820 + | aminotransferase AlaT TERM 436 371615 - 371605 - g 73 -6.8 -4.15066 | opp_overlap 371583 371604, overlap 371583 TATTCAGAAATGAAA GCTG TTG CAGC AATTCTTGGAGAGTT codY 371038 - 371820 + | transcriptional repressor CodY TERM 437 371858 - 371830 - f 100 -10.5 -5.19879 | opp_overlap 371835, overlap 371835 TTTTAAATAGAAAAA GAAAACATCTCTT TTC AAGAGATGTTTTT TGCTGTTAATGGTAG TERM 438 371835 - 371853 + F 100 -10.4 -5.28683 | opp_overlap 371830 371835 AATAGAAAAAGAAAA CATCTCTT TTC AAGAGATG TTTTTTGCTGTTAAT TERM 439 371853 - 371835 - f 100 -10.4 -5.40873 | opp_overlap 371835, overlap 371830 AATAGAAAAAGAAAA CATCTCTT TTC AAGAGATG TTTTTTGCTGTTAAT SpyM50334 371967 - 372521 + | isochorismatase family protein TERM 440 373300 - 373335 + F 100 -20 -5.24989 | GTTTAGTTTGTCACA CTTCCTGACTAAGGTT TTCT GACCTTAGTCAGGAAG TTTTTTGCTGTATGG gatC 373515 - 373817 + | aspartyl/glutamyl-tRNA amidotransferase subunit C gatA 373817 - 375283 + | aspartyl/glutamyl-tRNA amidotransferase subunit A gatB 375283 - 376722 + | aspartyl/glutamyl-tRNA amidotransferase subunit B TERM 441 376769 - 376793 + G 81 -5.6 -5.05601 | TGTCTCTGAAAAAAA GGCGGTCGGT CTTTC ACAGGCTGCC TTTTTGTATGTCATG SpyM50340 376719 - 376934 + | hypothetical protein SpyM50341 377143 - 377391 + | transglycosylase associated protein TERM 442 377397 - 377422 + F 100 -13.3 -5.02074 | opp_overlap 377397 AAGGTATTAAAAAAA GGCTGCATGGA AGTT TCCAAGCAGCC TTTTTTGCAACATAA TERM 443 377422 - 377397 - f 100 -13.3 -5.54894 | opp_overlap 377397 AAGGTATTAAAAAAA GGCTGCATGGA AGTT TCCAAGCAGCC TTTTTTGCAACATAA SpyM50342 377783 - 378490 + | phosphoglycerate mutase family protein TERM 444 378538 - 378551 + G 73 -6.7 -4.15044 | TCCTGCTCTTTGTCG GAGGT ATTT ACCTC TTTATTAAGCCAGAG SpyM50343 378480 - 379223 + | putative D-alanyl-D-alanine carboxypeptidase TERM 445 379741 - 379731 - g 70 -5.4 -4.45485 | ATTATACTGATAAAA CCTA TGC TAGG CGACTGATTCAGGTC SpyM50344 379220 - 379789 + | N-acetylmuramoyl-L-alanine amidase TERM 446 379782 - 379828 + F 91 -4.6 -5.80364 | opp_overlap 379792, overlap 379792 ACGATTTAACAAACT ATGACTGAAATTAGCACTCTTT ATA AAAGAGTGCTAATTTTTTTGAG TTTTTTTCTTGACAT TERM 447 379818 - 379792 - f 100 -15.4 -3.70438 | opp_overlap 379792 379782 AAACTATGACTGAAA TTAGCACTCTTT ATA AAAGAGTGCTAA TTTTTTTGAGTTTTT TERM 448 379792 - 379818 + F 100 -15.4 -5.63857 | opp_overlap 379792, overlap 379782 AAACTATGACTGAAA TTAGCACTCTTT ATA AAAGAGTGCTAA TTTTTTTGAGTTTTT TERM 449 379902 - 379876 - f 73 -7.4 -4.14004 | TAATAGAATTATAAA TTAGCAGTCTAC TAA ATAGAGTGCTAA ACGAAAGGGAGTGGT hrcA 379924 - 380958 + | heat-inducible transcription repressor TERM 450 381049 - 381039 - g 71 -6.8 -4.03888 | GATTTACAAGAAGAA GTGG AAG CCAC TGAAACTGAAGAGAC grpE 380961 - 381533 + | GrpE protein (HSP-70 cofactor) dnaK 381714 - 383540 + | molecular chaperone DnaK TERM 451 383576 - 383597 + F 90 -8.8 -4.67353 | opp_overlap 383569 383566 383578 ATTAATATCCGAATT CAGAGGTT GTACCA AACCTCTG TTTTTGGCTAAATAA TERM 452 383673 - 383658 - f 74 -7.6 -3.82605 | AAGAAAGGAATACAA GTTCGA TTAT TCGAAC ACAGGCTAAAGCGTG TERM 453 384162 - 384176 + G 73 -8.6 -3.64866 | opp_overlap 384156, overlap 384174 AAACCCAAATGCCCC TCGTCA AGG TGACGA TTTGCAATATCGTGT TERM 454 384767 - 384746 - g 70 -5.9 -4.33907 | gap 1, overlap 384766 CACAAACAGGTAAAA CCTTCCGCCT CAA AGGC-AAAGG AGCACCAAAACTCCG dnaJ 383821 - 384957 + | chaperone protein DnaJ TERM 455 385003 - 384968 - f 72 -7.7 -3.695 | opp_overlap 384968 TTTAAAGATGTCAAA CGTATAATCTCAGGA TAATTT TCCCGAAGTTATACG TTTTTTTTATGTCAA TERM 456 384968 - 385003 + F 95 -5.5 -6.02914 | opp_overlap 384968 TTTAAAGATGTCAAA CGTATAATCTCAGGA TAATTT TCCCGAAGTTATACG TTTTTTTTATGTCAA TERM 457 385604 - 385620 + G 84 -7.9 -4.68511 | overlap 385605 GTAAATGTTGGACTA GCACCGG ATG CCGGTGG TTTATTTCTATTGAC TERM 458 385605 - 385619 + G 85 -11.4 -3.40022 | overlap 385604 TAAATGTTGGACTAG CACCGG ATG CCGGTG GTTTATTTCTATTGA SpyM50349 385178 - 385969 + | enoyl-CoA hydratase SpyM50350 386043 - 386477 + | MarR family regulatory protein TERM 459 386654 - 386694 + G 71 -7.2 -3.87952 | gap 2, overlap 386640 386645 386655 386657 AGCTATTCAGGTTGC T-G-ATCAGCTTTTGACTCA GTC TGGGTTAAAAGCTGATGCTA TTGATTTTATTATTG TERM 460 386655 - 386692 + G 90 -12.3 -3.4959 | gap 1, overlap 386640 386654 386645 386657 GCTATTCAGGTTGCT G-ATCAGCTTTTGACTCA GTC TGGGTTAAAAGCTGATGC TATTGATTTTATTAT TERM 461 386657 - 386689 + G 95 -15.1 -2.86186 | overlap 386640 386655 386654 386645 TATTCAGGTTGCTGA TCAGCTTTTGACTCA GTC TGGGTTAAAAGCTGA TGCTATTGATTTTAT fabH 386478 - 387452 + | 3-oxoacyl-(acyl carrier protein) synthase III TERM 462 387460 - 387472 + F 74 -7.7 -3.85817 | GAATCTAGTTATTCA TGTGC CTA GCACA TTTATAAAAACAAAT acpP 387513 - 387737 + | acyl carrier protein fabK 387938 - 388909 + | enoyl-ACP reductase fabD 388934 - 389872 + | acyl-carrier-protein S-malonyltransferase fabG 389862 - 390596 + | 3-ketoacyl-(acyl-carrier-protein) reductase fabF 390611 - 391843 + | 3-oxoacyl-(acyl carrier protein) synthase II TERM 463 392019 - 391983 - g 95 -13.1 -3.59402 | opp_overlap 391989, overlap 391986 TCGATATCAAATCAA GAACATGCTGTGCCTGT ACC ACAGGTACAACTTGTTC CGAATTCAACTGCTT TERM 464 392016 - 391986 - g 79 -9 -3.92143 | opp_overlap 391989, overlap 391983 ATATCAAATCAAGAA CATGCTGTGCCTGT ACC ACAGGTACAACTTG TTCCGAATTCAACTG TERM 465 391989 - 392013 + G 76 -9.3 -3.65314 | opp_overlap 391986 391983 TCAAATCAAGAACAT GCTGTGCCTGT ACC ACAGGTACAAC TTGTTCCGAATTCAA fabE 391845 - 392345 + | acetyl-CoA carboxylase biotin carboxyl carrier protein subunit TERM 466 392648 - 392624 - g 70 -2.8 -5.09426 | GTGAAGTTCAAAAAA CAAGTCGTCC CTGGT GATCAACTTG TGATGACAGCAACCT fabZ 392345 - 392764 + | (3R)-hydroxymyristoyl-ACP dehydratase accC 392796 - 394160 + | acetyl-CoA carboxylase biotin carboxylase subunit accD 394169 - 395035 + | acetyl-CoA carboxylase subunit beta TERM 467 395133 - 395144 + G 73 -5.8 -4.63527 | CTTTATGGAACTGCA TGGC GATC GCCA TTTTTCAGATGATGG accA 395032 - 395802 + | acetyl-CoA carboxylase subunit alpha TERM 468 395997 - 396026 + T 79 -10.8 -2.82317 | opp_overlap 395997, overlap 395994 395993 CTTTAAAATAGTAAA CCCCAGAAATCA CTTTAA TGATCTCTGGGG TGAGTTTATTATTTA TERM 469 396026 - 395997 - T 100 -13.7 -4.07678 | opp_overlap 395997 395994 395993 CTTTAAAATAGTAAA CCCCAGAAATCAC TTTA ATGATCTCTGGGG TGAGTTTATTATTTA serS 397312 - 396035 - | seryl-tRNA synthetase SpyM50363 398063 - 397704 - | hypothetical protein TERM 470 398166 - 398142 - R 100 -10.8 -5.43621 | opp_overlap 398141 398145 ATAAAGCATAAAAAA GAAGCCTGAG TTCAT CTCAGACTTC CATTGGTTGATTACA manN 399088 - 398177 - | PTS system, mannose-specific IID component TERM 471 398713 - 398703 - G 71 -6.8 -4.0098 | GTTGAAGCCAAAGAA GCAC CAA GTGC CCCAAGGATAGGACG manM 399914 - 399105 - | PTS system, mannose-specific IIC component manL 400995 - 400003 - | putative mannose-specific phosphotransferase system (PTS), IIAB component TERM 472 401334 - 401311 - R 81 -9 -4.06864 | opp_overlap 401311 TTGACAGAAGAAGAA CCACCATTTT CTGA AAAATAGTGG TTTCGTTTGCTACTA TERM 473 401311 - 401334 + r 70 -6.8 -4.11623 | opp_overlap 401311 TTGACAGAAGAAGAA CCACCATTTT CTGA AAAATAGTGG TTTCGTTTGCTACTA SpyM50367 402159 - 401347 - | putative haloacid dehalogenase-like hydrolase SpyM50368 402422 - 403882 + | putative permease TERM 474 403915 - 403954 + F 72 -3.9 -4.98531 | gap 1 TTTGCTACTAACTGC CGCTTCTTTA-ATTGA TTTTAACCT TTAATATAAAGAAGCG TTTTTACTTTACGAA TERM 475 403984 - 404011 + F 90 -2.8 -6.00086 | gap 1, overlap 403987 ATACCTTATTTGAGT CAT-CTTCTAGGT AGT GCTTGGAAGTATG TTTTTTTTCTGATAT SpyM50369 404036 - 404497 + | ATP/GTP hydrolase SpyM50370 404472 - 404996 + | acetyltransferase (GNAT) family protein SpyM50371 405005 - 406288 + | LytR family regulatory protein TERM 476 406299 - 406276 - T 82 -11 -3.36273 | opp_overlap 406276 TCCTGCTAATATCAA CCCTCAGACC TAAC GTTCTGAGGG TTTTTATGTTTAAAA TERM 477 406276 - 406299 + T 100 -11 -5.19879 | opp_overlap 406276 TCCTGCTAATATCAA CCCTCAGACC TAAC GTTCTGAGGG TTTTTATGTTTAAAA TERM 478 406363 - 406338 - T 100 -9.1 -5.47159 | opp_overlap 406338 406340 406342 TTTGAATATAAAAAA GACAGGTATCA AAGA TGATAGCTGTC TGTGATTTCAAATAA TERM 479 406338 - 406363 + T 70 -9.1 -3.01497 | opp_overlap 406338, overlap 406340 406342 TTTGAATATAAAAAA GACAGGTATCA AAGA TGATAGCTGTC TGTGATTTCAAATAA SpyM50372 406755 - 406399 - | hypothetical protein SpyM50373 407171 - 406752 - | HIT-family protein TERM 480 407018 - 406989 - G 100 -14.5 -3.8505 | gap 1, opp_overlap 406991 406993 AGGAATACGAGCAAA GAGATGACTAGCTG TCT CAGC-AGTCATCTC TAGTAAGTTACGAAC TERM 481 406991 - 407016 + g 80 -11.3 -2.82933 | gap 1, opp_overlap 406989, overlap 406993 GAATACGAGCAAAGA GATGACTAGCTG TCT CAGC-AGTCATC TCTAGTAAGTTACGA SpyM50374 407243 - 407968 + | ABC transporter ATP-binding protein SpyM50375 407971 - 409005 + | ABC transporter protein EcsB SpyM50376 409069 - 409860 + | phosphotransferase enzyme family protein TERM 482 410327 - 410317 - g 73 -6.8 -4.15854 | AAATTCATTTTAAAA CCGA TAA TCGG GGCTTGTTTGAGTAC trmB 409860 - 410495 + | tRNA (guanine-N(7))-methyltransferase TERM 483 410721 - 410742 + F 90 -8.7 -4.68724 | opp_overlap 410709 410721 AAATAATACAGAAAG GTGGTGGGA TATG TCTCGCCAC TTTTGTATTAAGTGG SpyM50378 410754 - 411290 + | hypothetical protein nusA 411465 - 412622 + | transcription elongation factor NusA SpyM50380 412638 - 412934 + | hypothetical protein SpyM50381 412927 - 413229 + | hypothetical protein TERM 484 415401 - 415388 - g 84 -8.1 -4.72986 | TACGCTGATGAAAAA GCTGC GCGT GCAGC TGGTGAGGAGCGATC infB 413249 - 416110 + | translation initiation factor IF-2 TERM 485 416260 - 416288 + F 95 -12.5 -4.13014 | opp_overlap 416265, overlap 416265 AACAGGTAGCAATGT CATAAGCTGGGCT TTC AGCCTAGCTTTTG TTTTAAAAATGTGGA TERM 486 416283 - 416265 - f 73 -8.8 -3.37464 | opp_overlap 416260 416265 GTAGCAATGTCATAA GCTGGGCT TTC AGCCTAGC TTTTGTTTTAAAAAT TERM 487 416265 - 416283 + F 100 -11 -5.08255 | opp_overlap 416265, overlap 416260 GTAGCAATGTCATAA GCTGGGCT TTC AGCCTAGC TTTTGTTTTAAAAAT TERM 488 416404 - 416388 - g 73 -2.1 -5.24531 | overlap 416389 416390 ATTCTTCAGAAAAAA GTGCGTG ATC CACGCGT TCAGGGAGTAACGAT rbfA 416316 - 416666 + | ribosome-binding factor A TERM 489 416690 - 416726 + T 80 -11.1 -3.15078 | opp_overlap 416696, overlap 416696 GTGCGGATGTTATGA TAGAAAGAGCCTTATCA TTA TGATAGAGCTCTTTTTA ATTGTTATTTTGTGG TERM 490 416696 - 416720 + T 89 -7.9 -5.03201 | opp_overlap 416696, overlap 416690 ATGTTATGATAGAAA GAGCCTTATCA TTA TGATAGAGCTC TTTTTAATTGTTATT TERM 491 416720 - 416696 - T 76 -7.9 -4.08974 | opp_overlap 416696 416690 ATGTTATGATAGAAA GAGCCTTATCA TTA TGATAGAGCTC TTTTTAATTGTTATT TERM 492 416778 - 416760 - T 100 -10.3 -5.97575 | AAGCTACAAAAAAAA CCACCAG ATTAA CTGGTGG CAGGTAGGAATTATT TERM 493 416794 - 416808 + T 75 -5.6 -4.71828 | overlap 416796 CAGGTAGGAATTATT CCCCTC ATT GAGGAG TTTTGTTGATGGCAT SpyM50384 417787 - 416798 - | hypothetical protein copY 417959 - 418393 + | putative negative regulator of copper transport operon TERM 494 418650 - 418628 - g 77 -8.4 -3.80569 | overlap 418630 418645 CAAAACATATGCAAA CAGGTCGTCG TGA CGAAGACCTA AAGGTTATTTGGTCT TERM 495 418648 - 418630 - g 72 -8.8 -3.46904 | overlap 418628 418645 AAACATATGCAAACA GGTCGTCG TGA CGAAGACC TAAAGGTTATTTGGT copA 418393 - 420624 + | copper-transporting ATPase copZ 420638 - 420841 + | putative copper chaperone lacR1 421815 - 421045 - | lactose phosphotransferase system repressor 1 TERM 496 421198 - 421209 + g 72 -4.4 -4.67011 | overlap 421186 GAATTTTTGGTTATC TACC AAGA GGTA TTTTTCAATAGAATT TERM 497 422255 - 422227 - g 73 -10.4 -2.88427 | AAGATGGGTCAGATA TTTTGTATGCGG CTATT CCGCATACAGAA ACCAAGTATTGCTTG SpyM50389 422052 - 422525 + | PTS system, galactose-specific IIA component SpyM50390 422518 - 422823 + | PTS system, galactose-specific IIB component SpyM50391 422849 - 424300 + | sugar phosphotransferase system (PTS),galactitol-specific family IIC protein TERM 498 424340 - 424328 - f 84 -4.9 -5.30155 | TGACTAACTAAAAAA CTATT GGG AATAG CAGATAACCGCTTAA TERM 499 424411 - 424435 + F 90 -8.6 -4.63218 | gap 1, opp_overlap 424410 CTCATGTAAGGCAAG GCGCTCTGTGG GTAC CCGCA-AGCGC TTTTCTTGAAAGAAA TERM 500 424505 - 424519 + F 76 -5 -4.91712 | opp_overlap 424490 424489 424503 424505, overlap 424503 CCTGACCTAAGGACA GGTAAT CCT GTTACC TTTTTGTAGATTGGC lacA1 424564 - 424989 + | galactose-6-phosphate isomerase subunit LacA TERM 501 425304 - 425318 + G 77 -8.6 -3.79251 | opp_overlap 425303 AAGGAGGAATTGAAT GCCAAT GTG ATTGGC TTTGGTGGTAAAATC lacB1 425004 - 425519 + | galactose-6-phosphate isomerase subunit LacB lacD1 426029 - 427006 + | tagatose 1,6-diphosphate aldolase TERM 502 427083 - 427111 + F 100 -11.2 -5.37345 | opp_overlap 427087 TTTGAATCTTTTGTA GCAAGGATGAAA ATGGG TTTTATCCTTGC TTTTTTATCCTTACA SpyM50396 427203 - 427820 + | hypothetical protein SpyM50397 427822 - 428646 + | haloacid dehalogenase-like hydrolase TERM 503 428697 - 428641 - T 100 -16.4 -4.62069 | gap 2, opp_overlap 428654 428662, overlap 428643 428647 428662 CTTGCAGCTCAAAAA GACTAACTATTAACGTAAAAAGGTTCCC AAA AGGAACCTTTTTACGTTAATAG--AGGC AAGCCCATAGCAGCC TERM 504 428695 - 428643 - T 100 -17.6 -3.92746 | gap 2, opp_overlap 428654 428662, overlap 428641 428647 428662 TGCAGCTCAAAAAGA CTAACTATTAACGTAAAAAGGTTCCC AAA AGGAACCTTTTTACGTTAATAG--AG GCAAGCCCATAGCAG TERM 505 428693 - 428647 - T 100 -26.4 -3.60925 | opp_overlap 428654 428662, overlap 428643 428641 428662 GCTCAAAAAGACTAA CTATTAACGTAAAAAGGTTCCC AAA AGGAACCTTTTTACGTTAATAG AGGCAAGCCCATAGC TERM 506 428654 - 428686 + T 100 -18 -3.14132 | opp_overlap 428647 428643 428641 428662, overlap 428662 AAGACTAACTATTAA CGTAAAAAGGTTCC CAAAA GGAACCTTTTTACG TTAATAGAGGCAAGC TERM 507 428662 - 428678 + T 88 -8 -4.7629 | opp_overlap 428647 428643 428641 428662, overlap 428654 CTATTAACGTAAAAA GGTTCC CAAAA GGAACC TTTTTACGTTAATAG TERM 508 428678 - 428662 - T 100 -8.7 -4.7629 | opp_overlap 428662 428654, overlap 428647 428643 428641 CTATTAACGTAAAAA GGTTCCC AAA AGGAACC TTTTTACGTTAATAG SpyM50398 429239 - 428682 - | TetR family regulatory protein TERM 509 428900 - 428912 + g 88 -7.7 -5.16572 | TGAAAATCATTTTAA GAAGC TGA GCTTC TTTTTTAGCTTCAGT TERM 510 428940 - 428959 + g 78 -7.2 -4.35518 | gap 1, opp_overlap 428939 428937 428935 428940, overlap 428940 428941 428943 AGTAAAAAGATAGAG C-CAGGCTT GAT AAGCCTGAG TTTTAATATCAAATT TERM 511 428958 - 428940 - G 70 -9.6 -2.60234 | opp_overlap 428940 428940 428941 428943, overlap 428939 428937 428935 AGTAAAAAGATAGAG CCAGGCTT GAT AAGCCTGA GTTTTAATATCAAAT TERM 512 428941 - 428957 + g 76 -10.9 -2.51871 | opp_overlap 428940 428939 428937 428935, overlap 428940 428940 428943 GTAAAAAGATAGAGC CAGGCTT GAT AAGCCTG AGTTTTAATATCAAA TERM 513 430172 - 430162 - g 100 -6.8 -5.75342 | opp_overlap 430162, overlap 430166 CGTGGTCAAAAAAAA GCAG TTT CTGC TTTGATAGAAGAAAT SpyM50399 429532 - 430374 + | hypothetical protein SpyM50400 431189 - 430503 - | hypothetical protein TERM 514 431467 - 431480 + G 72 -4.5 -4.70515 | CATTTCATTTCTTTG GAGGC TTAG GTCTC TTTCTTTTCAGTATC SpyM50401 431427 - 433058 + | putative Na+/Pi-cotransporter protein TERM 515 433095 - 433064 - f 100 -9.6 -5.42259 | opp_overlap 433066 433071 433093, overlap 433066 CCAGCTTTAAAAAAA GAGAAAACGTGAAT GATC ATCCACGTTTTCTT TTTTGAATCCAAAAA TERM 516 433066 - 433093 + F 100 -10 -5.08824 | opp_overlap 433064 433066, overlap 433071 AGCTTTAAAAAAAGA GAAAACGTGAAT GATC ATCCACGTTTTC TTTTTTGAATCCAAA TERM 517 433093 - 433066 - f 93 -12.2 -4.35085 | opp_overlap 433066 433071, overlap 433064 AGCTTTAAAAAAAGA GAAAACGTGAAT GATC ATCCACGTTTTC TTTTTTGAATCCAAA TERM 518 433071 - 433088 + F 81 -4.1 -5.43553 | opp_overlap 433066 433064, overlap 433066 TAAAAAAAGAGAAAA CGTGAAT GATC ATCCACG TTTTCTTTTTTGAAT SpyM50402 433176 - 434324 + | N-acetylglucosamine-6-phosphate deacetylase SpyM50403 434446 - 435285 + | aldo/keto reductase family protein TERM 519 435320 - 435297 - f 73 -6.8 -4.20981 | opp_overlap 435297 TTAAGAAACTACAAA GATTTAGCCA TAAT TCGCTAAATC TTTTTTGAAAACGGT TERM 520 435297 - 435320 + F 82 -6.8 -5.00884 | opp_overlap 435297 TTAAGAAACTACAAA GATTTAGCCA TAAT TCGCTAAATC TTTTTTGAAAACGGT TERM 521 435508 - 435498 - g 72 -3.2 -5.10877 | overlap 435507 ATAACAAATGAAAAA GCCA TAT TAGC CCAAGGAGGACAGGA TERM 522 435616 - 435628 + G 75 -2.7 -5.19916 | overlap 435617 TTAAACAAATTAAGT TTGAT GGC ATCAG TTTTTTAGGTCTTTT SpyM50404 435420 - 435953 + | isoprenylcysteine carboxyl methyltransferase (ICMT) family protein TERM 523 436161 - 436210 + F 100 -17.3 -5.1675 | TAAATTAGGGTGGAA CCGCGTTTTGACGCCCCTAGGTC TTAT GATTTAGGAGCATCAAAATGCGG TTTTTTGGTGCCTAG glyQ 436325 - 437242 + | glycyl-tRNA synthetase subunit alpha TERM 524 437320 - 437298 - f 72 -7.6 -3.74762 | overlap 437299 AAGAGCGAGCAAGAA GTGGGCGACC GAA GGTCGCCGAG TCAAGGTTACTCCCG TERM 525 437319 - 437299 - f 79 -11.1 -2.84134 | overlap 437298 AGAGCGAGCAAGAAG TGGGCGACC GAA GGTCGCCGA GTCAAGGTTACTCCC TERM 526 437426 - 437452 + F 81 -9.6 -3.6502 | opp_overlap 437432, overlap 437427 437432 GAACACTTTTGTTTT CTGAAATTATCC ACT GGATAATTTCAC TTTGCGTCCCCCCTA TERM 527 437427 - 437451 + F 90 -13.1 -2.78798 | opp_overlap 437432, overlap 437426 437432 AACACTTTTGTTTTC TGAAATTATCC ACT GGATAATTTCA CTTTGCGTCCCCCCT TERM 528 437432 - 437446 + F 71 -7.2 -3.85909 | opp_overlap 437432, overlap 437427 437426 TTTTGTTTTCTGAAA TTATCC ACT GGATAA TTTCACTTTGCGTCC TERM 529 438903 - 438885 - g 72 -9.6 -3.02511 | TCTATCTGGTGAAGA TGCTGCTG TGG CAACAGCA ATCCGTGAACACTAC glyS 437620 - 439659 + | glycyl-tRNA synthetase subunit beta SpyM50407 439813 - 440070 + | hypothetical protein TERM 530 440101 - 440071 - f 86 -10.6 -3.6943 | opp_overlap 440073 440079, overlap 440073 440079 GACCCAAAATCATAA GACAAAAAGCAGCT CTG AACTGCTTTTTGTT TATCGTGATGACTGT TERM 531 440073 - 440099 + F 89 -11 -3.99592 | opp_overlap 440071 440073 440079, overlap 440079 CCCAAAATCATAAGA CAAAAAGCAGCT CTG AACTGCTTTTTG TTTATCGTGATGACT TERM 532 440099 - 440073 - f 95 -13.2 -3.41757 | opp_overlap 440073 440079, overlap 440071 440079 CCCAAAATCATAAGA CAAAAAGCAGCT CTG AACTGCTTTTTG TTTATCGTGATGACT TERM 533 440079 - 440093 + F 81 -4.2 -5.40464 | opp_overlap 440073 440071 440079, overlap 440073 ATCATAAGACAAAAA GCAGCT CTG AACTGC TTTTTGTTTATCGTG TERM 534 440093 - 440079 - f 86 -6.4 -5.16133 | opp_overlap 440079 440073, overlap 440073 440071 ATCATAAGACAAAAA GCAGCT CTG AACTGC TTTTTGTTTATCGTG SpyM50408 440245 - 440589 + | putative lipoprotein TERM 535 440699 - 440740 + F 100 -13.2 -4.81644 | opp_overlap 440709 CTTAGTTCTCTTTAT GACCCAATGATGACTCTG GATTAG CAGAGTGATTGTTGGGTC TTTTGATTTTCTTTG glpK 440949 - 442475 + | glycerol kinase TERM 536 444276 - 444264 - g 73 -7.7 -3.80174 | overlap 444261 AGAGTGGCACAAGAA GACGA TCT TCGTC GCGTGATTGCAGACA glpO 442491 - 444329 + | alpha-glycerophosphate oxidase glpF1 444331 - 445032 + | glycerol uptake facilitator protein 1 TERM 537 445039 - 445074 + F 84 -4.8 -5.38054 | gap 1, opp_overlap 445044, overlap 445040 445044 ATGTCCTAACCATCA CTAAAGGGGTTGGC-TA TCA TAGGCCAGCTCCTTTGC TTTTTCTTTATAGGA TERM 538 445040 - 445073 + F 74 -8.3 -3.81748 | gap 1, opp_overlap 445044, overlap 445039 445044 TGTCCTAACCATCAC TAAAGGGGTTGGC-TA TCA TAGGCCAGCTCCTTTG CTTTTTCTTTATAGG TERM 539 445044 - 445069 + F 79 -6.9 -4.46652 | gap 1, opp_overlap 445044, overlap 445040 445039 CTAACCATCACTAAA GGGGTTGGC-TA TCA TAGGCCAGCTCC TTTGCTTTTTCTTTA TERM 540 445862 - 445876 + G 70 -8.6 -3.27525 | overlap 445851 CCTTCCAAGGTGATT TGGCTA TTT TAGCCA TTAACTTTAGGCCAA SpyM50412 445141 - 446487 + | NADH peroxidase TERM 541 447776 - 447802 + G 75 -9.5 -3.34398 | overlap 447763 447794 CATCAGAAAGTTTAT GACTGTCTGAT TACCT ATCAGACTGTC TGTTTACCGAGACAA TERM 542 447869 - 447879 + G 70 -5.4 -4.37092 | CCCTACGAACTCACT GCTT TAG AAGC TTTTCTCAAAGACCT SpyM50413 446477 - 447976 + | trans-acting positive regulator TERM 543 448198 - 448214 + G 71 -6.6 -4.10007 | AATCCAACCATTATC TCACGT GAAGG ACGTGA TTTTGAAACAGTTAT SpyM50414 448102 - 448746 + | putative translaldolase tkt 448964 - 450949 + | transketolase TERM 544 450965 - 450990 + F 100 -13.5 -5.44119 | opp_overlap 450965 GTTACACATCCCAAA CAGAGTAAATC AAAT GATTTACTCTG TTTTTTTAAAATAAA TERM 545 450990 - 450965 - f 100 -13.5 -3.65425 | opp_overlap 450965 GTTACACATCCCAAA CAGAGTAAATC AAAT GATTTACTCTG TTTTTTTAAAATAAA SpyM50416 451141 - 451407 + | hypothetical protein SpyM50417 451441 - 452175 + | ABC transporter ATP-binding protein TERM 546 452344 - 452354 + G 76 -3.2 -5.28414 | GATTGCCATGTTTTT GGTG ATT TACC TTTTTATGTTTATTG SpyM50418 452180 - 453808 + | ABC transporter permease TERM 547 453835 - 453850 + F 82 -6.8 -4.95758 | opp_overlap 453835, overlap 453829 CATTATTCGGAAAAA CAGTCC TCTG GGGCTG TTTTTATGCTATAAT proA 454686 - 455936 + | gamma-glutamyl phosphate reductase TERM 548 455993 - 455983 - g 70 -5.4 -4.37863 | opp_overlap 455983, overlap 455980 AGAGAAAAAGAAGAA GCAA AGG TTGC TTTAGAAGAACTTTT SpyM50422 455956 - 456177 + | hypothetical protein TERM 549 456562 - 456585 + G 82 -8.8 -4.27512 | overlap 456559 TTATGTTGATGCGAC GCTAGGTGGC TCAG GCCACTCAGC TTATTTGTTGTCCAA TERM 550 456983 - 456959 - g 71 -6.5 -4.19624 | overlap 456946 TATGGTGAAGATAAA TTCTCCAAGCA GAT TGCTCGAAAAA TTGAACAAGCAAGAG mraW 456470 - 457420 + | S-adenosyl-methyltransferase MraW TERM 551 457503 - 457483 - g 75 -2.5 -5.30199 | opp_overlap 457483, overlap 457485 AAAAACGAATAAAAA CTTTCTCTA GAA TTGAGAAGG CTTTTTATACTGCTA ftsL 457425 - 457748 + | putative cell division protein TERM 552 458851 - 458833 - g 73 -7.4 -4.10672 | opp_overlap 458833, overlap 458843 TCAACCCAAACGAAA CCTTTAGC AAT GCTAATGG TTTAACAATTGCAGA pbpX 457752 - 460007 + | putative penicillin binding protein 2x mraY 460009 - 461019 + | phospho-N-acetylmuramoyl-pentapeptide-transferase TERM 553 461699 - 461720 + G 75 -10.3 -3.21593 | overlap 461697 ATTGCAGCTTCGCTT CCAAAATCT GTTC AGATTTTGG TGTTCTCAGCAACTA mraW 461177 - 462520 + | ATP-dependent RNA helicase SpyM50428 462714 - 463517 + | ABC transporter permease protein SpyM50429 463517 - 464260 + | ABC transporter ATP-binding protein TERM 554 464275 - 464317 + F 72 -3.7 -5.00884 | gap 1, overlap 464287 ATGTTATTCTTTTGT TATAATAA-AAAGGTCTAGG TATT CCTGGGCTTTTCTTGTTATG TTTTTTAGAAAAACT TERM 555 464287 - 464304 + F 78 -5.5 -4.99312 | overlap 464275 TGTTATAATAAAAAG GTCTAGG TATT CCTGGGC TTTTCTTGTTATGTT SpyM50430 464364 - 464588 + | hypothetical protein SpyM50431 464652 - 465569 + | putative thioredoxin reductase SpyM50432 465738 - 467117 + | amino acid permease TERM 556 468250 - 468230 - g 79 -9.1 -3.90112 | GGTGTTGGAACCAAA CTGATCACA GCC TATGATCAG CCTGCCTTAGGTGCT SpyM50433 467288 - 468742 + | nicotinate phosphoribosyltransferase TERM 557 469344 - 469354 + G 71 -6.8 -4.03413 | TTGAAAGTTTTAGGA GCAG ATG CTGC TTTGTATGAAAAAGT nadE 468744 - 469568 + | NAD synthetase TERM 558 469631 - 469600 - f 100 -8.2 -5.57888 | opp_overlap 469608, overlap 469608 AGTAAAAAAAGAAAA CAAAAAAAGTTAGG TTAT CCTAACTTTTTTCT TGAAGAAAATCAAAT TERM 559 469608 - 469623 + F 100 -7.6 -5.4505 | opp_overlap 469600 469608 AAGAAAACAAAAAAA GTTAGG TTAT CCTAAC TTTTTTCTTGAAGAA TERM 560 469623 - 469608 - f 100 -7.6 -6.17669 | opp_overlap 469608, overlap 469600 AAGAAAACAAAAAAA GTTAGG TTAT CCTAAC TTTTTTCTTGAAGAA pepC 469753 - 471090 + | aminopeptidase C TERM 561 471216 - 471240 + T 81 -2.8 -5.60864 | opp_overlap 471216 TGACATATGAAAAAA CACGTCTTCG GTATA TGGAAACGTG TTTTTTTCATGTATA TERM 562 471240 - 471216 - T 73 -2.1 -5.24989 | opp_overlap 471216 TGACATATGAAAAAA CACGTCTTC GGTATAT GGAAACGTG TTTTTTTCATGTATA TERM 563 471362 - 471382 + T 81 -8.5 -4.29034 | TTAACGTTGTACCTT TTCTTTAAT ACG ATTAAAGAA TTCTGTTTTTTGTTT TERM 564 471425 - 471474 + T 80 -10.3 -3.42354 | gap 1, opp_overlap 471436, overlap 471436 GGTAAGTCATTTGTG TC-ATATAAAAAGCGAGTCCTC ACAGAAC GTGGACTCGCTTTTTATTTAGA TTATCACTTAAGGTA TERM 565 471462 - 471436 - T 100 -10.8 -4.96848 | opp_overlap 471425 471436 TGTGTCATATAAAAA GCGAGTCCTCAC AGA ACGTGGACTCGC TTTTTATTTAGATTA TERM 566 471436 - 471462 + T 100 -9.4 -5.33026 | opp_overlap 471436, overlap 471425 TGTGTCATATAAAAA GCGAGTCCTC ACAGAAC GTGGACTCGC TTTTTATTTAGATTA pbp1A 473722 - 471557 - | putative penicillin-binding protein 1A recU 474317 - 473709 - | Holliday junction-specific endonuclease TERM 567 474062 - 474094 + g 82 -7.8 -4.57569 | CGCCGCAATAGTCAG TCGTTGAAGCTTGT CTAAA GTATGCTTCAACGA TTTTTGCCCGACTGC TERM 568 474777 - 474791 + G 75 -2.8 -5.24129 | opp_overlap 474777 TTTTATTAGAAAAGA CAGAAG GGG CTTATG TTTTTTATGACACAG SpyM50438 474398 - 474913 + | hypothetical protein SpyM50439 475032 - 475358 + | DivIVA protein TERM 569 475759 - 475774 + F 100 -9 -5.04868 | TGCATAATAGGTTAA GCTAGC ACTT GCTAGC TTTTATTTGATTTAA TERM 570 476332 - 476322 - g 79 -6.8 -4.57073 | TATCGCGTTCAAAAA GGTG GAG CACC GATCAAGGAAAATAT SpyM50440 475803 - 476957 + | putative RNA methylase family protein SpyM50441 476971 - 478440 + | hypothetical protein TERM 571 478478 - 478455 - T 100 -8.2 -5.81622 | opp_overlap 478455 AGAAAATCAAAAAAA CTGAGATAAG GCAA CTTGTCTCAG TTTTTTGATTAATAA TERM 572 478455 - 478478 + T 100 -10.4 -5.30155 | opp_overlap 478455 AGAAAATCAAAAAAA CTGAGATAAG GCAA CTTGTCTCAG TTTTTTGATTAATAA luxS 479067 - 478585 - | S-ribosylhomocysteinase SpyM50443 480472 - 479141 - | putative permease SpyM50444 481322 - 480543 - | 3-hydroxybutyrate dehydrogenase TERM 573 480701 - 480718 + g 75 -7.7 -4.09511 | overlap 480704 CTTCAAGAACATTTT CAAGGGG AATA CCTCTTG TTTTGGAAAGGTCTT atoD2 482671 - 482021 - | acetate CoA-transferase alpha subunit 2 TERM 574 482354 - 482343 - G 73 -7.2 -4.13767 | CCGCCTAGCCCAAAA CCGC CACT GCGG ATGCGCTCAGCTAAT atoB2 483882 - 482695 - | acetyl-CoA acetyltransferase 2 TERM 575 483967 - 483982 + H 79 -3.4 -5.54894 | opp_overlap 483952 TAAAAATATAGAATT TTTATA AGCA TATAAA TTTTTTTGATAGATT TERM 576 484951 - 484964 + G 76 -2.4 -5.47218 | GCCTACATCATGGAC GACT TGCTAC AGTC TTTTTTTAAGTAGGG SpyM50448 484081 - 484977 + | LysR family regulatory protein TERM 577 485597 - 485575 - g 78 -2.8 -5.36965 | gap 1 GAAGAGGAGAAAAAA GCAG-AACT GGAAAA AGTTGCTGC GATGACGATTGCAGA SpyM50449 485107 - 486714 + | hypothetical protein TERM 578 486739 - 486714 - f 88 -13.5 -2.74012 | opp_overlap 486714 486720, overlap 486720 TGATTATGCCAAGTA GAAAAAGAGGA ATTA TCCTCTTTTTC TTTATGACTAGCCTT TERM 579 486714 - 486739 + F 100 -13.5 -3.92641 | opp_overlap 486714 486720, overlap 486720 TGATTATGCCAAGTA GAAAAAGAGGA ATTA TCCTCTTTTTC TTTATGACTAGCCTT TERM 580 486733 - 486720 - f 82 -6.7 -4.98255 | opp_overlap 486720 486714, overlap 486714 TGCCAAGTAGAAAAA GAGGA ATTA TCCTC TTTTTCTTTATGACT TERM 581 486720 - 486733 + F 91 -6.7 -5.38958 | opp_overlap 486714 486720, overlap 486714 TGCCAAGTAGAAAAA GAGGA ATTA TCCTC TTTTTCTTTATGACT TERM 582 487161 - 487184 + G 93 -6.8 -5.40072 | overlap 487167 CTCTTCAGGTTAAGT CAAAAGTACC AGAT GGTGTTTTTG TTTTTTTAACACCAC TERM 583 487167 - 487178 + G 84 -2.2 -5.86609 | overlap 487161 AGGTTAAGTCAAAAG TACC AGAT GGTG TTTTTGTTTTTTTAA gmk 486824 - 487459 + | guanylate kinase rpoZ 487475 - 487792 + | DNA-directed RNA polymerase subunit omega TERM 584 487788 - 487810 + F 100 -8.6 -5.32699 | opp_overlap 487788 AAGAAGGAGAAAAAA TCTAAGGTTT CAG AAATCTTAGA TTTTTTCATATTTAG TERM 585 487810 - 487788 - f 91 -6.4 -5.4111 | opp_overlap 487788 AAGAAGGAGAAAAAA TCTAAGGTTT CAG AAATCTTAGA TTTTTTCATATTTAG priA 487857 - 490241 + | primosome assembly protein PriA fmt 490303 - 491238 + | methionyl-tRNA formyltransferase TERM 586 492156 - 492146 - g 70 -3.2 -4.84914 | ATTGAGACAAGAAAA CTAG ATG CCAG AGAGGTTCATCGTCA SpyM50454 491228 - 492550 + | 16S rRNA m(5)C 967 methyltransferase TERM 587 492578 - 492566 - f 72 -7.7 -3.79251 | TATTTTAGGAGGAAA CTGAC TGA GTCAG AAAAAACGTATGAAG TERM 588 492794 - 492772 - g 71 -4.8 -4.63542 | overlap 492774 GAGAATGGGTAAAAA CAGACTTCAC AGA GTTAAGTCAG ATTAGAGATTGGTTA SpyM50455 492588 - 493328 + | putative protein phosphatase stk1 493325 - 495223 + | serine/threonine-protein kinase TERM 589 495228 - 495270 + F 84 -7.9 -4.68994 | opp_overlap 495228 495231 AAACACCTTAACAAA GAATAGTTAGTCTCATGTT TTACT GGCATGCCACTAACTATTC TTTTTAACTACTCGT TERM 590 495270 - 495228 - f 73 -6.5 -4.21351 | opp_overlap 495228, overlap 495231 AAACACCTTAACAAA GAATAGTTAGTCTCATG TTTTACTGG CATGCCACTAACTATTC TTTTTAACTACTCGT SpyM50457 495346 - 496038 + | hypothetical protein SpyM50458 496035 - 497039 + | sensor histidine kinase TERM 591 497165 - 497185 + G 71 -4.8 -4.50058 | gap 1, overlap 497167 497179 AAGGGGTTGATTTGG CAT-TGGCT TTGA AGCCAGATG TTTTGGTTATGGATC SpyM50459 497032 - 497673 + | response regulator protein SpyM50460 497710 - 499110 + | cyclophilin type peptidyl-prolyl cis-trans isomerase protein TERM 592 499511 - 499460 - g 85 -6.9 -5.02074 | gap 1, opp_overlap 499472 499474, overlap 499472 GCAGTTTTTAAAAAA GAACACTAAAAAGAGTCTGGAACC TTAGT AGTTCCAAACCCTTTTTTAT-TTC GTCTTAATTACTGGT SpyM50461 499110 - 499487 + | hypothetical protein TERM 593 499472 - 499500 + T 84 -3.1 -5.69793 | opp_overlap 499460 499472, overlap 499474 AAAGAACACTAAAAA GAGTCTGGAAC CTTAGTA GTTCCAAACCC TTTTTTATTTCGTCT TERM 594 499500 - 499472 - T 95 -8.2 -4.94672 | opp_overlap 499472 499474, overlap 499460 AAAGAACACTAAAAA GAGTCTGGAACC TTAGT AGTTCCAAACCC TTTTTTATTTCGTCT cysM 500446 - 499505 - | putative cysteine synthase TERM 595 500557 - 500523 - R 71 -5.2 -4.59376 | overlap 500527 500529 ATTATTAAAGTAAAA TACAGATTTACTATCA CTC TGATAATAAAGCCATA TCACTTTTGTTGATG SpyM50463 501206 - 500574 - | hypothetical protein TERM 596 501622 - 501605 - gH 76 -2 -5.46698 | TGCAAAATCAAAAAA CAACAT TAGTTC ATGCTG TAACTGGTTCAGGAA comFA 501262 - 502587 + | putative late competence protein TERM 597 502981 - 503000 + GF 78 -6.4 -4.55887 | GAGTGCTATTCTTGA GGCAGCTA ATGT TAGCTACC TTTCTCTTTTTGAAA comFC 502559 - 503224 + | putative late competence protein TERM 598 503287 - 503275 - f 78 -9.1 -3.72621 | TTAAAGATAAAGTAA GCGCT TCA AGCGC GAGAAAGAGGTATCC SpyM50466 503304 - 503852 + | sigma 54 modulation protein / S30EA ribosomal protein TERM 599 504083 - 504106 + T 100 -4.6 -6.20267 | opp_overlap 504075 504083 AAAAATATGAAAAAG CGCGTTTT CAGAATAT AAAGCGCG TTTTTTTCTTTTTCC TERM 600 504229 - 504216 - T 78 -3.9 -5.35815 | GACACCAAATAAAAA TAGAA TTTT TTCTA ACTAAAAATAATAGC TERM 601 504259 - 504270 + T 70 -3 -5.08824 | CACAATCTTTGGCAG CAAT CTGA ATTG TTTTTTCCATAAAAG TERM 602 504736 - 504722 - T 90 -8.6 -4.65032 | GAAACGAGAAATAAA TCTGTC AGC GACAGA AGGAACGAGTAAGTT TERM 603 505776 - 505789 + T 70 -5.3 -4.43477 | ACATCCCGATGCCCG CTCTA GAGA TAGAG TTTTACTTCGGTACA TERM 604 506545 - 506500 - T 78 -7.7 -4.2558 | gap 1, opp_overlap 506507, overlap 506507 CACTTCCTAGGAAAA TAGACAATCTTCCCTTGTGTGC AAG GCACACATGGTCAGATT-CCTA ATTTTCTACAGAAGT TERM 605 506507 - 506539 + T 73 -9.1 -3.3972 | opp_overlap 506500 506507 TAGGAAAATAGACAA TCTTCCCTTGTGTGC AAG GCACACATGGTCAGA TTCCTAATTTTCTAC TERM 606 506539 - 506507 - T 80 -9.1 -3.84985 | opp_overlap 506507, overlap 506500 TAGGAAAATAGACAA TCTTCCCTTGTGTGC AAG GCACACATGGTCAGA TTCCTAATTTTCTAC TERM 607 507019 - 507000 - T 90 -12.2 -3.62096 | opp_overlap 506999 506998 CGGCAGGAGGGCAAA CCGAAGTG TTTA CACTTCGG GGTTGTAGGACTGCG TERM 608 507711 - 507678 - T 70 -8.9 -3.03412 | overlap 507677 507700 CAATCTCAGATAAAC TCCGAATGCCAACGA GATA TCATCGGCAGTCAGA CTGCGAGTGCTAAGA TERM 609 510589 - 510560 - T 100 -13.9 -4.98255 | opp_overlap 510560 TTTTAATGATAAAAA GCTTAAATTTGTT GTAT AACAAATTTAAGC TTTTTATTGTTTCTT TERM 610 510560 - 510589 + T 100 -13.9 -5.44198 | opp_overlap 510560 TTTTAATGATAAAAA GCTTAAATTTGTT GTAT AACAAATTTAAGC TTTTTATTGTTTCTT TERM 611 511117 - 511127 + T 73 -5.4 -4.68724 | GAAGACGATTGAGGC CGAT GGT ATCG TTTTGTCTTGAATGA TERM 612 511343 - 511356 + T 74 -3.9 -5.243 | CGGAGATTTCCTCGC TACTA AACT TAGTA TTTTTTGATACTTTC TERM 613 511385 - 511419 + T 71 -5 -4.63527 | TCCTTAGGTAGTGCT TAAGGCAGCGACTTCT TTT GGAATTCCATGCCTTA TTTTTGAGATCCTAG SpyM50468 511498 - 511373 - | hypothetical protein TERM 614 511482 - 511444 - G 79 -6.9 -4.59773 | gap 1, opp_overlap 511450, overlap 511446 511450 TCCTAGGCTCAAAAA TACCAAGTGGCGTCAACA CTAA CATTGACGCCACTTT-TA CCACAACGAAAAACA TERM 615 511481 - 511446 - G 71 -7.6 -3.91506 | opp_overlap 511450, overlap 511444 511450 CTAGGCTCAAAAATA CCAAGTGGCGTCAACA CTAA CATTGACGCCACTTTT ACCACAACGAAAAAC TERM 616 511450 - 511477 + g 90 -11.4 -4.07568 | opp_overlap 511446 511444 511450 GCTCAAAAATACCAA GTGGCGTCAA CACTAACA TTGACGCCAC TTTTACCACAACGAA TERM 617 511477 - 511450 - G 90 -12.8 -3.60925 | opp_overlap 511450, overlap 511446 511444 GCTCAAAAATACCAA GTGGCGTCAACA CTAA CATTGACGCCAC TTTTACCACAACGAA SpyM50469 512163 - 511630 - | hypothetical protein recX 513019 - 512243 - | recombination regulator RecX SpyM50471 514334 - 513249 - | putative integrase TERM 618 514212 - 514226 + g 72 -10 -2.72537 | overlap 514211 514209 TTGTATCGTTTTTAT GCCACT TTC AGTGGC CTCCTTTTTTTCTCC TERM 619 514294 - 514313 + g 76 -3.6 -5.31091 | opp_overlap 514296, overlap 514296 514297 CCTTTCAAGGTAATG TACCAAAA TATG TTTGGGTA TTTTGTTTTATTGTA TERM 620 514468 - 514503 + r 95 -2 -6.22691 | gap 2, overlap 514467 TTGATTGCATATTGC CTCACGCTC--AGAGT CGCCAA ACTTTGAGAGCGTGGG TTTTTTTTATTCTTA SpyM50472 515937 - 514516 - | phage membrane protein TERM 621 514925 - 514937 + g 80 -6.3 -4.66938 | TCCTCTTTATCTTTT TCAAG CTC CTTGA TTTTATCTTCAAGCT SpyM50473 516320 - 515952 - | hypothetical protein SpyM50474 516663 - 516322 - | hypothetical protein TERM 622 516433 - 516467 + g 78 -2.9 -5.4505 | gap 1, overlap 516434 516435 516437 CACAACCTTTTCGCG TAGATTGGATAGGTCA ATAG TGGCCTG-CCAATCAG TTTTTTCTTCAGCAA TERM 623 516552 - 516572 + g 71 -7.5 -3.92996 | opp_overlap 516551, overlap 516553 TTGCATTCATCACAC CGCGCTCTA AAA TGGAGCGCA TTGTTGTGTATGGGA TERM 624 516553 - 516571 + g 78 -11 -2.95316 | opp_overlap 516551, overlap 516552 TGCATTCATCACACC GCGCTCTA AAA TGGAGCGC ATTGTTGTGTATGGG SpyM50475 516846 - 517073 + | hypothetical protein SpyM50476 517101 - 517820 + | putative phage antirepressor protein TERM 625 517887 - 517862 - T 76 -4.7 -4.9792 | overlap 517864 TAGCGGAGAGAAAAA GAGAGCCTATC ATAA GATAGACCCTG AACTGATAAAAACCG TERM 626 517885 - 517864 - T 73 -7.3 -4.11141 | overlap 517862 GCGGAGAGAAAAAGA GAGCCTATC ATAA GATAGACCC TGAACTGATAAAAAC SpyM50477 518157 - 517918 - | hypothetical protein SpyM50478 518324 - 518509 + | putative DNA-binding phage protein TERM 627 518534 - 518517 - f 100 -7.7 -5.60689 | TTAGATAACAAAAAA GTCCGAC GGGA ATCGGAC TCAAAACAAACTTAA SpyM50479 518580 - 518831 + | putative DNA binding phage protein SpyM50480 518862 - 518999 + | hypothetical protein SpyM50481 519093 - 519809 + | putative phage replication protein SpyM50482 519796 - 520578 + | putative phage DNA replication protein SpyM50483 520569 - 520706 + | hypothetical protein SpyM50484 520719 - 521072 + | hypothetical protein SpyM50485 521053 - 521307 + | hypothetical protein TERM 628 521533 - 521518 - g 74 -6.2 -4.45259 | AAAGCCGAAAAAGAA GCTTTT TACA AAAAGC AAAAGCAAGCAGAAG SpyM50486 521329 - 521811 + | hypothetical protein TERM 629 522675 - 522657 - f 76 -7.5 -4.08394 | ACAGTCTGCTGAAAA TTTAGCC AACTG GGCTAAA AAAGGTGCTTTGATC SpyM50488 522909 - 523112 + | putative phage DNA-binding protein SpyM50489 523112 - 523552 + | putative phage endodeoxyribonuclease SpyM50490 523549 - 523905 + | hypothetical protein TERM 630 524084 - 524070 - g 80 -7.8 -4.41047 | ACTTGGCAATTAAAA GCGCTC TTA GAACGC AGAATATTGCCAAAT SpyM50491 523902 - 524147 + | hypothetical protein SpyM50492 524147 - 524383 + | hypothetical protein SpyM50493 524380 - 524550 + | hypothetical protein SpyM50494 524547 - 524831 + | putative phage membrane protein SpyM50495 524833 - 525465 + | hypothetical protein SpyM50496 525470 - 525949 + | hypothetical protein SpyM50497 525946 - 526116 + | hypothetical protein TERM 631 526347 - 526329 - g 89 -4.5 -5.54907 | overlap 526323 TCCACAAAACAAAAA GACGTCC ATACG GAACGCC CCCTTGGTTAAATTT SpyM50498 526233 - 526358 + | hypothetical protein SpyM50499 526400 - 526834 + | putative autolysin regulatory protein SpyM50500 526983 - 527177 + | hypothetical protein TERM 632 527421 - 527439 + F 100 -9.6 -5.24796 | opp_overlap 527421 ATGGTTAACCAATTA GTCATCAC ATT GTGGTGAC TTTTTATTATGTAAA TERM 633 529064 - 529050 - g 89 -5.6 -5.49809 | GAAATTGCAAAAAAA GGAGGC ATA GCTTCC GGCAAAGCTAGGAGG SpyM50504 528978 - 529454 + | hypothetical protein TERM 634 529508 - 529481 - f 82 -7.8 -4.41616 | opp_overlap 529487, overlap 529487 ATCTTTTCAAATAAA CAAAAAGACGTC ATTA GACGCCCTTTTA ACTACGAATTAGAGG TERM 635 529502 - 529487 - f 93 -6.8 -5.5454 | opp_overlap 529487, overlap 529481 TCAAATAAACAAAAA GACGTC ATTA GACGCC CTTTTAACTACGAAT TERM 636 529624 - 529614 - g 70 -5.4 -4.46656 | opp_overlap 529599 529597, overlap 529606 GTCAGAAGATGAAAA TCAC CTT GTGA CTGCTTATAATCAAG TERM 637 529729 - 529717 - g 77 -4.8 -4.88405 | opp_overlap 529727 AACTGCGAAATAAAA CACG ACGAG CGTG GAGATCACTTGTTAA SpyM50505 529537 - 530748 + | hypothetical protein TERM 638 531517 - 531532 + G 70 -9 -3.21269 | opp_overlap 531505 531517, overlap 531515 531514 TAACAAGGATATTAA TAGCCC ACTT GGGCTA TCTATCTTTGATAAC TERM 639 531532 - 531517 - g 72 -9 -3.35176 | opp_overlap 531517 531515 531514, overlap 531505 TAACAAGGATATTAA TAGCCC ACTT GGGCTA TCTATCTTTGATAAC SpyM50506 530762 - 532264 + | putative minor capsid protein SpyM50509 533762 - 533989 + | hypothetical protein TERM 640 534024 - 534046 + F 100 -9.2 -5.37345 | opp_overlap 534022 CTTATTAAATCTAGA GCATTTAGCT AAA AGCTAGGTGC TTTTTTGTACTTAAA SpyM50510 534076 - 534342 + | putative secreted phage protein TERM 641 534382 - 534397 + F 81 -5.4 -5.21236 | opp_overlap 534382 CCTTTAGAAGTCAAA GTCGTA GCAA TACGGC TTTTTATTATGCCTT TERM 642 534753 - 534738 - g 78 -7.6 -4.3453 | AATGCTAAAGACAAA GAGCTT GAGG AAGCTC GGGCAAACAATAAGG SpyM50511 534468 - 535082 + | hypothetical protein TERM 643 535138 - 535118 - g 72 -9.7 -2.97721 | overlap 535117 TAAAATGGCACAAAT GCTAGACCC TGA GGTTCTAGC GGATATGATTGATGC SpyM50512 535086 - 535904 + | putative major head protein TERM 644 536060 - 536048 - g 77 -4.8 -4.95854 | opp_overlap 536050 GAAAAAATGGAAAAA CGTG CTAGC CACG CTGTCAATCTTTACT TERM 645 536216 - 536190 - g 71 -9.5 -2.80195 | opp_overlap 536187 536197, overlap 536187 536192 ACTCAGGAGTAATGA CAGCAGAGGAT AAACA ATCCTTTGCTG GAATATCTCTAGGAC SpyM50513 535958 - 536374 + | hypothetical protein TERM 646 536434 - 536452 + G 76 -7.4 -4.18401 | AAGGTGATTATGGAG GGTTTGTC TAT GACGGACC TTTTACACTCTCTCC SpyM50514 536364 - 536696 + | hypothetical protein SpyM50515 536696 - 537052 + | hypothetical protein TERM 647 537203 - 537183 - g 71 -6.9 -4.0098 | CGGGAAGGTAAATAA CGAGTAC ATGGACG GTACTCG TGAGATAAGCCTGCC SpyM50516 537049 - 537447 + | hypothetical protein SpyM50517 537447 - 537908 + | hypothetical protein TERM 648 537904 - 537934 + F 100 -13.5 -5.00616 | opp_overlap 537909 TCCCAAGTGAGGTTT TATAAGGTTGGGC TAACT GCTCAACCTTATA TTTTTTAAGGAGGAA SpyM50518 537952 - 538386 + | hypothetical protein SpyM50519 538390 - 538971 + | putative phage Gp15 protein TERM 649 539589 - 539569 - f 76 -4.7 -5.03314 | opp_overlap 539569 539570, overlap 539570 TTGAGCGTTAAAAAA CGGGCAAAT AAC ATTTGACCA ATTTTCTAATAAGTT TERM 650 541546 - 541559 + F 70 -8.1 -3.46647 | opp_overlap 541532, overlap 541544 AGAGTTGGGTATCCA CTCGC CATC GCGAG TATTTACTGAGTACG TERM 651 542004 - 541964 - f 95 -11.4 -4.53303 | gap 1, opp_overlap 541962 GATGCGGATAGAAAA GTCATTGACTCATCTATGC AAAA GC-TAAAAGAGTCAATGAC GATTAATGCGACCCC SpyM50522 542212 - 542928 + | hypothetical protein TERM 652 543244 - 543231 - g 71 -6.7 -4.09243 | GATATTGCTTTAAAA CCGTT TGTA AACGG TGCGAGCGTAGGAGC TERM 653 543804 - 543771 - g 100 -6.7 -5.98675 | GACAAAAATAAAAAA GAGCCAACAGTCGAA GAAA TTAGAAAGTTGGCTC AGAAGTACCTTAAGG SpyM50523 542925 - 545069 + | hypothetical protein SpyM50524 545066 - 546076 + | putative phage hyaluronidase TERM 654 546533 - 546514 - f 75 -9.4 -3.14931 | opp_overlap 546510 GCTAGCGCTCATCAA TGATACCA TTGA TGGTATCA GGCGTGAGTATCGAG TERM 655 547284 - 547269 - f 74 -7.6 -3.96624 | CACCTTTACCACAAA GATAGC AGAG GCTATC AAGATTAGGGCTGAT TERM 656 547466 - 547490 + F 73 -6.5 -4.32034 | overlap 547470 ATGGCGCTATGCTTA TTGATCTTAGC TCG GCTAAGATGGA TTTTAATAGTAATGC TERM 657 547470 - 547486 + F 73 -9.5 -2.78495 | overlap 547466 CGCTATGCTTATTGA TCTTAGC TCG GCTAAGA TGGATTTTAATAGTA TERM 658 548232 - 548201 - g 77 -5.2 -4.93296 | gap 1 TGATGAGCACAAAAA CATCAAGC-TAGCAG ACC CCGCTAAACTCGACG AGCTCAACGACCTAC SpyM50527 547986 - 548417 + | hypothetical protein SpyM50528 548420 - 549052 + | hypothetical protein SpyM50529 549062 - 549517 + | putative phage holin protein TERM 659 549710 - 549654 - g 81 -3 -5.58522 | gap 1, opp_overlap 549671 549697, overlap 549656 TAGACAAAATAAAAA GCGCAGTTATCGCAGAGTGGCACACTC ATAA GATTTTGCCATCCTT-GACAACTGCTC AAGCTATTTTAGAGA TERM 660 550661 - 550640 - g 84 -12.3 -2.94062 | opp_overlap 550638 GAGATCAATATCAGA CGCTGGCCA AGTC TAGCCAGCG AGGTTGTAGGTATCT SpyM50530 549629 - 550834 + | putative phage amidase protein TERM 661 550844 - 550868 + F 79 -4.8 -5.23316 | opp_overlap 550845 550846, overlap 550846 AATTAGATAAGACAA ATGCCCTCGC TTTTT GCGGGGGCTG TTTTTTGGTATCCTA TERM 662 550846 - 550866 + F 91 -11.8 -4.23988 | opp_overlap 550845 550846, overlap 550844 TTAGATAAGACAAAT GCCCTCGC TTTTT GCGGGGGC TGTTTTTTGGTATCC TERM 663 550866 - 550846 - f 75 -9.6 -3.17975 | opp_overlap 550846 550844, overlap 550845 TTAGATAAGACAAAT GCCCTCGC TTTTT GCGGGGGC TGTTTTTTGGTATCC TERM 664 551422 - 551410 - g 73 -7.7 -3.91332 | ATGAGGATAGAATAA TGGAC GGT GTCCA AGGAATTAAATATAC SpyM50531 550974 - 551498 + | hypothetical protein SpyM50532 551486 - 552352 + | phage membrane protein TERM 665 552361 - 552382 + T 100 -9.4 -5.5208 | opp_overlap 552361 TAAATAAAAAGCCAA CCGCTCTC TTGATT GAGGGCGG TTTTTTGTGTTATAA SpyM50533 552836 - 552402 - | phage membrane protein TERM 666 553067 - 553027 - R 89 -10.8 -4.06491 | opp_overlap 553027 TTAACTTTATACAAA TTACCCCAAATATTAAAT AAATA ATCTAACATTTGGGATAA TGTTCACAATCTAGA SpyM50534 553914 - 553108 - | streptococcal phage DNAse TERM 667 553801 - 553782 - G 71 -5 -4.63218 | opp_overlap 553782 TCGTTCCTAACAAAA TTTCCGTG GTAT CAGGGAAA TTTCTAATTTTTCTG TERM 668 554069 - 554101 + H 78 -9.6 -3.61438 | opp_overlap 554068 554067 554077, overlap 554068 554072 554077 554096 TAACAAAAAAGATGT TAATTAAATTTAAA CGACC TTTAAATTTAATTA TATTATTTCCTGTAA TERM 669 554072 - 554098 + H 71 -6.9 -3.92071 | opp_overlap 554068 554067 554077, overlap 554069 554068 554077 554096 CAAAAAAGATGTTAA TTAAATTTAAA CGACC TTTAAATTTAA TTATATTATTTCCTG SpyM50535 554146 - 554328 + | hypothetical protein TERM 670 554349 - 554333 - f 86 -4.4 -5.76237 | overlap 554335 TAGACAAATAAAAAA GACCTC GTCCA GAAGTC GGGGAATAGTCGAGG TERM 671 554910 - 554893 - g 79 -5.5 -4.90266 | TTTAGGAATGAAAAA GCCAGAT CACT ATCGGGC CAAATTGCAGTTTCA TERM 672 555575 - 555553 - g 100 -7 -5.64274 | GGATGCACAAAAAAA TGCCAAATCC ATG GGCTTTGACA ACGCTTACTATGAGG SpyM50536 554519 - 555874 + | putative RNA methyltransferase SpyM50537 556540 - 557895 + | putative sensor kinase TERM 673 557933 - 557958 + T 100 -11.9 -4.74453 | opp_overlap 557924 557933 TCAAAATCAACTTAA GAGTCTGAGAC AATA GTCCCAGACTC TTTTTGAATATGTTA TERM 674 557958 - 557933 - T 100 -14.1 -3.28783 | opp_overlap 557933, overlap 557924 TCAAAATCAACTTAA GAGTCTGAGAC AATA GTCCCAGACTC TTTTTGAATATGTTA SpyM50538 560701 - 557996 - | glycosyl hydrolases family protein SpyM50539 562029 - 560716 - | hypothetical protein SpyM50540 562135 - 563175 + | GntR family regulatory protein TERM 675 563812 - 563798 - g 70 -8.6 -3.38522 | overlap 563796 GACTTATTTCAAAGA GCTACT TGC AGTAGC CAAGGAAGAAGGGAT SpyM50541 563226 - 564920 + | beta-N-acetylglucosaminidase SpyM50542 564945 - 566387 + | putative beta-glucosidase TERM 676 566440 - 566484 + T 79 -7.1 -4.42062 | opp_overlap 566442, overlap 566442 TGTTACCAATGATTA AACAAGGGCCTTTTTCCTCAT GTT AAGAGGATCGAGGCTCTTGTA TTTCTTTGGAAAGTG TERM 677 566442 - 566482 + T 84 -9.7 -3.81557 | opp_overlap 566442, overlap 566440 TTACCAATGATTAAA CAAGGGCCTTTTTCCTCAT GTT AAGAGGATCGAGGCTCTTG TATTTCTTTGGAAAG SpyM50544 567876 - 566998 - | ROK family protein SpyM50545 568093 - 569043 + | binding-protein-dependent transport system membrane protein SpyM50546 569053 - 569979 + | binding-protein-dependent transport system membrane protein TERM 678 569990 - 570007 + F 73 -5.5 -4.59027 | opp_overlap 569991 570001, overlap 569991 AATAGGACTTAAGGA ACTGGTC ACAA GACCAGA TTTTATCTAATCGTT TERM 679 569991 - 570006 + F 73 -9 -3.34332 | opp_overlap 569991 570001, overlap 569990 ATAGGACTTAAGGAA CTGGTC ACAA GACCAG ATTTTATCTAATCGT TERM 680 570006 - 569991 - f 73 -9 -3.38584 | opp_overlap 569990 569991, overlap 570001 ATAGGACTTAAGGAA CTGGTC ACAA GACCAG ATTTTATCTAATCGT SpyM50547 570060 - 571505 + | extracellular solute-binding protein TERM 681 571534 - 571553 + F 88 -7.8 -4.81212 | TTGATTATAAGTTGA GGGCTGGG AAAT CTCAGCTC TTTTCTTCTGATGAG SpyM50548 571811 - 572416 + | hypothetical protein TERM 682 573241 - 573252 + G 76 -4.4 -5.03994 | overlap 573235 ATTTATTAGCGGAAG CTGT CAGG ACAG TTTTTGTGTATGGCC SpyM50549 572406 - 574130 + | sensor histidine kinase TERM 683 574512 - 574490 - g 71 -7.6 -3.90038 | overlap 574492 ATGAAACAATTTAAA GACTGCTTGG ATG CCCAGCAGGC AGAATCAATCCGGCA TERM 684 574510 - 574492 - g 72 -8.8 -3.5256 | overlap 574490 GAAACAATTTAAAGA CTGCTTGG ATG CCCAGCAG GCAGAATCAATCCGG SpyM50550 574130 - 575614 + | response regulator protein SpyM50551 575634 - 579050 + | glycosy hydrolase family protein aroE 579188 - 580066 + | shikimate 5-dehydrogenase SpyM50553 580318 - 581073 + | SAM-dependent methyltransferase SpyM50554 581126 - 581464 + | hypothetical protein SpyM50555 581466 - 581771 + | hypothetical protein TERM 685 581843 - 581811 - g 70 -9.3 -3.10597 | opp_overlap 581816, overlap 581816 TGGCCTATGGAAAAG CAAAAGAGAAGGTGA CGC TCATCTTCTCTTTTT ACGTATTCAAAGCGA TERM 686 581816 - 581838 + G 95 -11.4 -4.74706 | opp_overlap 581811 581816 TATGGAAAAGCAAAA GAGAAGGTGA CGC TCATCTTCTC TTTTTACGTATTCAA TERM 687 581838 - 581816 - g 89 -9.2 -4.68645 | opp_overlap 581816, overlap 581811 TATGGAAAAGCAAAA GAGAAGGTGA CGC TCATCTTCTC TTTTTACGTATTCAA SpyM50556 581791 - 581937 + | hypothetical protein TERM 688 581984 - 581943 - T 100 -7.4 -5.54894 | opp_overlap 581916 581943 581942 AATTCACTAAAAAAA CCTTAATGAGTTTCCTAT CTCCTT ATAGGTTTCTCATTAAGG CTTTTTAGACGAAAT TERM 689 582235 - 582217 - T 86 -9.6 -4.33819 | opp_overlap 582217 582216, overlap 582218 ACTATTTATAATAAA CTGTCGAG CTT CTCGACAA ATTGGTGATCGTCTT TERM 690 582234 - 582218 - T 80 -10.9 -3.19568 | opp_overlap 582217 582216, overlap 582217 CTATTTATAATAAAC TGTCGAG CTT CTCGACA AATTGGTGATCGTCT aroB 583280 - 582207 - | 3-dehydroquinate synthase SpyM50558 584088 - 583336 - | 3-deoxy-7-phosphoheptulonate synthase TERM 691 584053 - 584039 - G 70 -3.6 -4.89477 | GGTCCAACAATAAAA TTATTC TTA GAACAA GTCTTATTTTGAAAG TERM 692 584290 - 584317 + H 95 -7.1 -5.28176 | opp_overlap 584290 CTAGCTATAAAAAAA TACTGCCCTAA ATCTTA TTAGGACAGTA TTTTTTATAGATGCC TERM 693 584317 - 584290 - H 100 -9.3 -5.64274 | opp_overlap 584290 CTAGCTATAAAAAAA TACTGCCCTAA ATCTTA TTAGGACAGTA TTTTTTATAGATGCC SpyM50559 584566 - 584820 + | hypothetical protein SpyM50560 584884 - 585237 + | hypothetical protein TERM 694 585452 - 585478 + F 100 -13.8 -4.17906 | opp_overlap 585449 GTAACACGAAATTCG TCCCTGTCTAGG TTA TCTAGGCAGGGA TTATTTGGTTTCATT TERM 695 585561 - 585550 - f 70 -3 -5.1764 | TATATAATAGAAAAA CTTT GCCC AAAG TGGAAACAGAACGGC SpyM50563 585838 - 586401 + | hypothetical protein TERM 696 586756 - 586736 - g 77 -8.3 -3.85698 | CTTGGTCGTGACAAA TTCCTAGAC AAG GTCTGGGAA TGGAAAGACGAATAT TERM 697 588668 - 588654 - g 73 -8.6 -3.72743 | CACCATCAAAACCAA TCACCA TTT TGGTGA AGACAGCAGATAGTG valS 586403 - 589051 + | valyl-tRNA synthetase TERM 698 589078 - 589113 + T 100 -10.5 -4.87807 | gap 1 CATTGCTTCCGCAGA GTCCTGCCGC-TAGAC CATCA GTCTAAGCGACAGGGC TTTTTGCTATATTCA SpyM50565 590122 - 589268 - | hypothetical protein SpyM50566 590442 - 591422 + | putative oxidoreductase SpyM50567 591514 - 592446 + | CorA-like Mg2+ transporter protein TERM 699 592512 - 592538 + F 76 -5.8 -4.69027 | GATTTTCGTCATGAA CCTGATCTCATT AAA AGAGAGGTCGGG TTTTTACATGCCTTT SpyM50568 592666 - 593376 + | putative cytochrome c-type biogenesis protein SpyM50569 593389 - 594012 + | putative lipoprotein msrAB 594055 - 595161 + | bifunctional methionine sulfoxide reductase A/B protein TERM 700 595209 - 595224 + F 74 -7.5 -3.87815 | opp_overlap 595209 AAGACTAGTATGAGA GGGCC ATGCAA GGCCC TTTATAAAGATAAGG TERM 701 595301 - 595275 - g 73 -9.5 -3.25192 | opp_overlap 595275, overlap 595273 595279 GTTAATTGTAGAAGA CGAATACCTTG TGCGC CAGGGTATTCG TTCTTTGGTTGATTT TERM 702 595275 - 595301 + G 91 -11.7 -4.12947 | opp_overlap 595275 595273 595279 GTTAATTGTAGAAGA CGAATACCTTG TGCGC CAGGGTATTCG TTCTTTGGTTGATTT SpyM50571 595249 - 595989 + | response regulator protein TERM 703 597612 - 597597 - g 73 -7.6 -4.10161 | GACCAGCGGTTAAAA CTTCAC TATG GTGAAG GCTACCACATGACCA SpyM50572 595986 - 597719 + | sensor histidine kinase SpyM50573 597792 - 598871 + | hypothetical protein SpyM50574 598894 - 599610 + | hypothetical protein TERM 704 599696 - 599653 - T 100 -7.6 -5.4756 | gap 1, opp_overlap 599653 AAGGTTAACAAAAAA GCGAGTAAACGAATGTCCT GTCATTT AGGTT-TTCGTTTACTCGC TTTTTGATGAGATTT TERM 705 599653 - 599696 + T 100 -10.5 -4.75404 | gap 1, opp_overlap 599653 AAGGTTAACAAAAAA GCGAGTAAACGAATGTCCTG TCATT TAGGTT-TTCGTTTACTCGC TTTTTGATGAGATTT argR 600249 - 599776 - | arginine repressor TERM 706 600514 - 600504 - g 70 -3.2 -4.87318 | CCGAAAAGCTAAAAA GGAC CAT ATCC TTTTTTTTGAGGGAG SpyM50576 600391 - 601071 + | Crp family regulatory protein TERM 707 602125 - 602112 - g 70 -3.1 -4.87803 | overlap 602113 CATCTTTAAACAAAA CCTTG GCTT CAAGA AAGTATTGGCCTTTG arcA 601345 - 602580 + | arginine deiminase TERM 708 603024 - 603011 - g 71 -5.3 -4.56775 | AGTCCCTTGCAAAAA CCATT CTTA AATGG GAGAAGAATATGGAC SpyM50578 602680 - 603108 + | acetyltransferase (GNAT) family protein TERM 709 603735 - 603718 - g 71 -6.3 -4.25256 | opp_overlap 603717 603718 TTCTCACCAAAAGAA CTCTTCC CAGA AGAAGAG ATTGTGACATTGGCT arcB 603148 - 604161 + | ornithine carbamoyltransferase TERM 710 604255 - 604301 + F 100 -11.1 -4.83169 | gap 2, opp_overlap 604255 604258, overlap 604258 ACTTTAACTACATGA CAAGTCGTTCTGGTTCTCGTGTC CTT GAC-CG-GAACTAGAACGGCTTA TTTTTATGAAAAGGT TERM 711 604258 - 604298 + F 100 -12.8 -4.52873 | gap 2, opp_overlap 604258 604255, overlap 604255 TTAACTACATGACAA GTCGTTCTGGTTCTCGTGTC CTT GAC-CG-GAACTAGAACGGC TTATTTTTATGAAAA TERM 712 604298 - 604258 - f 72 -8.4 -3.49858 | gap 2, opp_overlap 604255 604258, overlap 604255 TTAACTACATGACAA GTCGTTCTGGTTCTCGTGTC CTT GAC-CG-GAACTAGAACGGC TTATTTTTATGAAAA SpyM50580 604331 - 605824 + | C4-dicarboxylate anaerobic carrier protein SpyM50581 605841 - 607172 + | hypothetical protein arcC 607192 - 608142 + | carbamate kinase TERM 713 608274 - 608307 + F 100 -14.9 -4.37711 | opp_overlap 608279, overlap 608279 ACAATAGTAGTATTA GAAAAGGCTAATTTT ATTG AGAATTAGCCTTTTC TTTTAGCTTTGATAG TERM 714 608279 - 608302 + F 100 -9 -5.14698 | opp_overlap 608279, overlap 608274 AGTAGTATTAGAAAA GGCTAATTTT ATTG AGAATTAGCC TTTTCTTTTAGCTTT TERM 715 608302 - 608279 - f 76 -6.8 -4.49311 | opp_overlap 608279 608274 AGTAGTATTAGAAAA GGCTAATTTT ATTG AGAATTAGCC TTTTCTTTTAGCTTT asnA 608455 - 609447 + | asparagine synthetase AsnA SpyM50585 609570 - 610109 + | putative methylase coaD 610099 - 610590 + | phosphopantetheine adenylyltransferase TERM 716 611418 - 611447 + G 70 -5.7 -4.36592 | opp_overlap 611418, overlap 611421 GTGCAGGTCTTAAAG TAGTTGCAGCAGC TGAA GCTGGTGCAGATA TATTTTTTGTTCCGA SpyM50587 610577 - 611614 + | hypothetical protein TERM 717 611719 - 611671 - f 86 -4.5 -5.66684 | opp_overlap 611671 611672, overlap 611672 TAACTCATAAAAAAA CGGTTGAACCAGATAGACAGATC CTT GACCAGTCTTTTGGGTTCAATCA TTTTTTACATAAAAC TERM 718 611671 - 611719 + F 76 -4.5 -5.08824 | opp_overlap 611671 611672, overlap 611672 TAACTCATAAAAAAA CGGTTGAACCAGATAGACAGATC CTT GACCAGTCTTTTGGGTTCAATCA TTTTTTACATAAAAC TERM 719 611672 - 611718 + F 72 -8 -3.64812 | opp_overlap 611672 611671, overlap 611671 AACTCATAAAAAAAC GGTTGAACCAGATAGACAGATC CTT GACCAGTCTTTTGGGTTCAATC ATTTTTTACATAAAA SpyM50588 612026 - 613003 + | LacI family regulatory protein TERM 720 613475 - 613464 - g 70 -3 -5.14819 | AAATGAAAAAAGAAA TTTC GCCA GAAA TGTACAACTATAATA SpyM50590 613427 - 614071 + | hypothetical protein SpyM50591 614075 - 615154 + | radical SAM superfamily protein TERM 721 615201 - 615222 + T 100 -8.8 -5.37043 | opp_overlap 615200 615199 TGATGACAAAATATT CCTAGTCA CTAAAA TGACTAGG TTTTTTATCTGGCCT SpyM50592 615862 - 615236 - | type IV leader peptidase family protein TERM 722 616348 - 616358 + G 73 -8.2 -3.80733 | CGTTTGATCACTATT GGCG GAG CGCC TTATTCTACCCTAGC TERM 723 616591 - 616571 - g 70 -2.5 -5.04385 | overlap 616574 616575 CAGAGGCTGAAAAAA CCATTTGGA TGC TCCAAGCAG AGCGTGGACAAGGCC dpr 616090 - 616617 + | Dps-like peroxide resistance protein Dpr TERM 724 616640 - 616663 + F 89 -6.1 -5.26316 | opp_overlap 616640 TGCCTTAGGATAAAA GAAGTCAAT GATAAA ATTGGCTTC TTTTTTATGGAATCA TERM 725 616787 - 616804 + G 83 -4.9 -5.33026 | opp_overlap 616787 ATGATGTGCAACAAT TGCTAAA AAAC TTTGGCA TTTTTGTTTACCTTG SpyM50594 616759 - 616962 + | hypothetical protein glkA 616967 - 617938 + | glucokinase SpyM50596 617948 - 618337 + | hypothetical protein SpyM50597 618520 - 620361 + | BipA family GTPase TERM 726 620393 - 620435 + F 70 -8.1 -3.38581 | opp_overlap 620393, overlap 620433 AACTAAATAAAATAG CAAAAAGATATTTAAGAAA AGTCA TTTTTTAAAGGTCTTTTTG TGTTTACAAGTTCCT SpyM50598 620483 - 620734 + | hypothetical protein TERM 727 620775 - 620808 + F 79 -6.9 -4.37013 | gap 1, opp_overlap 620777, overlap 620777 GTTTTTATACGATAA AAGGACTGAT-TTGTT TTA GACAATATCAGTCCTC TTTTAATAGTTCATT TERM 728 620777 - 620806 + F 81 -9.5 -3.77927 | gap 1, opp_overlap 620777, overlap 620775 TTTTATACGATAAAA GGACTGAT-TTGTT TTA GACAATATCAGTCC TCTTTTAATAGTTCA TERM 729 620806 - 620777 - f 90 -8.8 -4.50976 | gap 1, opp_overlap 620777 620775 TTTTATACGATAAAA GGACTGAT-TTGT TTTAG ACAATATCAGTCC TCTTTTAATAGTTCA murD 621090 - 622448 + | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase murG 622448 - 623530 + | N-acetylglucosaminyl transferase TERM 730 623707 - 623695 - g 71 -6.3 -4.20696 | overlap 623687 GCAGCAAGCTCAAAA TGCTT CTG AAGCA GTTGAGCTTAAAACT TERM 731 623743 - 623733 - g 73 -5.4 -4.49344 | AAACTGATGAGAAAA CTGA TAG TCAG GAAATTGAGTCAGAA SpyM50601 623531 - 624679 + | putative cell division protein TERM 732 624779 - 624800 + F 100 -10.3 -5.69473 | opp_overlap 624779 TTATATAACAAAAAA CGTAAAATG ATAA CATTTTACG TTTTTTTATGGTATA TERM 733 624800 - 624779 - f 100 -10.3 -5.60689 | opp_overlap 624779 TTATATAACAAAAAA CGTAAAATG ATAA CATTTTACG TTTTTTTATGGTATA TERM 734 624894 - 624905 + G 73 -2.2 -5.243 | GAGGTCAAGTGAATG GCTA GAAA TGGC TTTTTTACTGGTTTG ftsA 624891 - 626255 + | putative cell division protein ftsZ 626279 - 627598 + | cell division protein FtsZ SpyM50604 627601 - 628272 + | hypothetical protein SpyM50605 628284 - 628940 + | hypothetical protein SpyM50606 628945 - 629199 + | hypothetical protein SpyM50607 629199 - 629990 + | RNA binding protein SpyM50608 630000 - 630758 + | putative cell-division protein DivIVA ileS 631031 - 633832 + | isoleucyl-tRNA synthetase TERM 735 633896 - 633873 - T 89 -11 -3.85505 | opp_overlap 633873 TGAGTAAGAAGACAA CCATCGGGTC TTAG GACCTGATGG TTTTTTAGTAGAGCT TERM 736 633873 - 633896 + T 100 -13.2 -5.14965 | opp_overlap 633873 TGAGTAAGAAGACAA CCATCGGGTC TTAG GACCTGATGG TTTTTTAGTAGAGCT TERM 737 634070 - 634047 - T 100 -8.2 -5.4505 | opp_overlap 634047 TTCGCTAATAAAAAA CTTAGCTCTT TTAG AAGGGCTAAG TTTTGTCTGAATAGC TERM 738 634047 - 634070 + T 95 -10.4 -4.55287 | opp_overlap 634047 TTCGCTAATAAAAAA CTTAGCTCTT TTAG AAGGGCTAAG TTTTGTCTGAATAGC SpyM50610 634398 - 634096 - | hypothetical protein SpyM50611 634904 - 634449 - | Mut/NUDIX family protein TERM 739 635023 - 634996 - R 78 -5.6 -5.01546 | opp_overlap 634996 634998 635000, overlap 634998 AAATTGATAGAAAAA GAGAGAGTCTCC TTAT AGAAACTCTCTT AGCTAACGTTAATCT TERM 740 635021 - 634998 - R 79 -8.2 -4.11744 | opp_overlap 634996 634998 635000, overlap 634996 ATTGATAGAAAAAGA GAGAGTCTCC TTAT AGAAACTCTC TTAGCTAACGTTAAT clpE 637314 - 635032 - | putative ATP-dependent Clp protease ATP-binding subunit SpyM50613 637612 - 637842 + | hypothetical protein TERM 741 637854 - 637884 + F 80 -10.6 -3.30007 | opp_overlap 637844 637860 637862, overlap 637862 TTAAGCTTGACATAG TAAAGAGACTTGCC TGA GGCAGGTTTTTTTA TTGTCAAAAAGTATT TERM 742 637862 - 637876 + F 100 -7.8 -5.88565 | opp_overlap 637860 637862, overlap 637854 GACATAGTAAAGAGA CTTGCC TGA GGCAGG TTTTTTTATTGTCAA SpyM50614 637969 - 638655 + | putative amino acid ABC transporter permease protein glnQ3 638655 - 639389 + | putative glutamine transporter, ATP-binding protein 3 TERM 743 639446 - 639404 - f 100 -24 -3.14463 | opp_overlap 639404 639412, overlap 639412 AATCTGTTCTATGAA TTATAAAAGGAAGTCCTAAA TGA TTTAGGACTTCCTTTTATAA TTTGCTAAGGCATTT TERM 744 639404 - 639446 + F 100 -24 -3.73968 | opp_overlap 639404 639412, overlap 639412 AATCTGTTCTATGAA TTATAAAAGGAAGTCCTAAA TGA TTTAGGACTTCCTTTTATAA TTTGCTAAGGCATTT TERM 745 639438 - 639412 - f 100 -16.8 -4.56607 | opp_overlap 639404 639412, overlap 639404 CTATGAATTATAAAA GGAAGTCCTAAA TGA TTTAGGACTTCC TTTTATAATTTGCTA TERM 746 639412 - 639438 + F 100 -16.8 -4.63172 | opp_overlap 639412 639404, overlap 639404 CTATGAATTATAAAA GGAAGTCCTAAA TGA TTTAGGACTTCC TTTTATAATTTGCTA TERM 747 640669 - 640685 + G 90 -10.9 -4.2142 | TGGGCTGCTTCCACT GGAACAG ATG CTGTTCC TTATTTTAGAATATT phr 639538 - 640947 + | putative deoxyribodipyrimidine photolyase SpyM50617 641955 - 640957 - | insertion sequence IS1239 putative transposase TERM 748 641082 - 641105 + g 83 -7.4 -4.75309 | TCCAATGTTCAATAG CAGCGACTTC TTTA GGGGTCGTTG TTTTGTTACCTTTAG TERM 749 641994 - 642010 + H 70 -2.9 -5.18357 | opp_overlap 641997, overlap 641980 641995 641997 TGGTGAACTACAAGT ATACCTC TTA GAGGTGC TTTTTTCATACCTTA TERM 750 642149 - 642160 + H 74 -3 -5.42259 | GTTGTCTCCCTTAGA GAAA GCGA TTTC TTTTTTTGGAGCTGA TERM 751 642792 - 642776 - g 71 -5.1 -4.63675 | overlap 642772 642777 AGGAAATCAAACAAA TGCCTTT TGA AAAGGCT CTGGACAGTGGACTT TERM 752 642791 - 642777 - g 70 -8.6 -3.36578 | overlap 642776 642772 GGAAATCAAACAAAT GCCTTT TGA AAAGGC TCTGGACAGTGGACT TERM 753 643473 - 643459 - g 73 -7.8 -3.85698 | opp_overlap 643459 TTTGTTCGTGACAAA GACGCT GTT AGCGCC TCTATGATGATTGTA SpyM50618 642211 - 643905 + | putative phosphoglucomutase folD 644113 - 644967 + | FolD bifunctional protein TERM 754 645001 - 645020 + F 90 -2.8 -5.98675 | opp_overlap 645002, overlap 645002 ACATAAGAGAATATA AGAAGTCA GCAA TGGCTTCC TTTTTTGTTTTTCTG TERM 755 645330 - 645315 - g 80 -4.7 -5.26316 | GGAGTCTATAAAAAA CTAGG ATTCGA CCTAG AAGAAGGCATGAAAA xseA 645120 - 646460 + | exodeoxyribonuclease VII large subunit TERM 756 646614 - 646601 - g 76 -3.1 -5.25803 | AAGCGGCAGAAAAAA CACTC GTCA AAGTG ATGCAAGCTGATGGC xseB 646438 - 646653 + | exodeoxyribonuclease VII small subunit TERM 757 647398 - 647367 - g 93 -7.2 -5.42259 | TTATTTGCAAAAAAA GCTACTTACCCAAG TTTA CTGGGGTTAGAAGC CTCCTACCAACTGTT fps 646653 - 647525 + | putative geranyltranstransferase SpyM50623 647518 - 648345 + | hemolysin-like protein TERM 758 648424 - 648447 + G 71 -9.6 -2.84325 | opp_overlap 648427, overlap 648422 648420 AAGATTATTGGCAGA GCATGGGTTA GAAT TAACCCAGGC TACTATTTCAAGAGA SpyM50624 648332 - 648802 + | putative repressor protein TERM 759 649938 - 649891 - g 71 -4.1 -4.86033 | opp_overlap 649894, overlap 649895 649924 AAAGCCTTAGAAAAA CAATTGGTTGCTGCAGCCACT AACTTG AGTGAACGCCGCCATCAATTG GCGGAGCAATTAGAA TERM 760 650313 - 650327 + G 77 -5 -4.99043 | overlap 650315 TCAAGTTATTGCTAT TGCTGA TTA TCAGTA TTTTATTTCTAAAGA recN 648823 - 650484 + | putative DNA repair protein TERM 761 650472 - 650498 + F 73 -7.4 -4.09285 | overlap 650474 GGCTCGTGAACTACT TGCCAAACATTA AGA TTATGTTTGGTA TTTGATATTTTCATA TERM 762 651498 - 651488 - g 83 -3.2 -5.61881 | TTGCAAAAAGAAAAA TAGC CCT GCCA CAAACGGGAGAGGAG SpyM50626 650656 - 651594 + | hypothetical protein TERM 763 651622 - 651663 + F 76 -5.9 -4.64591 | gap 1, opp_overlap 651622 TGTAGTTGTAAAAGA CGGGGCAAATGTTCAAGCGT GAA AAGGTTG-ACTTTTGCCTCG TTTTGTATCTCGTTA TERM 764 652456 - 652444 - g 74 -4.9 -4.67982 | overlap 652439 GTCGAGGTAATAAAA CATTT ACG AAATG GTTAGATAGTTACCT SpyM50627 651822 - 652661 + | hypothetical protein SpyM50628 652654 - 653496 + | GDSL-like lipase/acylhydrolase protein TERM 765 653731 - 653709 - g 80 -2 -5.59357 | opp_overlap 653709 ATCAGACTAAAAAAA TGTCTTATAA ATT TTATGCGACA TCTTCTTCTATTTTG SpyM50629 653474 - 654061 + | hypothetical protein hlpA 654160 - 654435 + | DNA-binding protein HU TERM 766 654450 - 654486 + T 91 -5.9 -5.47159 | gap 1, opp_overlap 654445 654450 ATTGCATAGATAAAA GCCCATTGTATCAAGC GTTACA GCCTG-TGCAGTGGGC TTTTTTGTGTTCAGG SpyM50631 655667 - 654525 - | phage integrase SpyM50632 656057 - 655791 - | hypothetical protein SpyM50633 656455 - 656069 - | hypothetical protein SpyM50634 656808 - 656458 - | putative DNA-binding phage protein TERM 767 656898 - 656843 - H 88 -5.2 -5.67967 | AGCATTACAAAAAAA TATTTTAAAATTAATTCTAAAATCTG TTGA CAAAATTTATAATTAGTTCTAAAATA TAAAATGTAAAGCGA TERM 768 657068 - 657081 + H 73 -6.7 -4.19735 | ATCTAAAAATATTTC GCGAA AAAA TTCGC TTTACTTTTAAAAAG SpyM50635 657116 - 657331 + | hypothetical protein TERM 769 657440 - 657416 - g 95 -11.5 -4.72863 | opp_overlap 657419 GTAAAGAAACTAAAA GAAGCCCATCC AAA GGATAGACTTC AATTCAATATAAATA SpyM50636 657344 - 657478 + | hypothetical protein SpyM50636A 657841 - 658026 + | putative DNA-binding phage protein TERM 770 658052 - 658035 - f 100 -7 -5.9218 | TAGATAACAAAAAAA GTCCGA TTGCCG TCGGAC TCAAAACAAATTTTA SpyM50638 658105 - 658416 + | putative excisionase SpyM50639 658418 - 658603 + | hypothetical protein SpyM50640 658712 - 658966 + | putative DNA-binding phage protein SpyM50641 659121 - 659507 + | hypothetical protein SpyM50642 659488 - 659721 + | hypothetical protein SpyM50643 659718 - 659858 + | hypothetical protein SpyM50644 659867 - 660073 + | hypothetical protein SpyM50645 660129 - 660458 + | hypothetical protein SpyM50646 660461 - 661237 + | RecT family phage protein TERM 771 661814 - 661783 - g 70 -9.6 -2.66257 | gap 1, opp_overlap 661789, overlap 661782 661781 661785 CGAAAAAGCAAAAGC TACCAT-CTCAGGAC AAT GTGCTGAGTATGGTA TGACTGACCAACCTT SpyM50647 661247 - 662275 + | hypothetical protein SpyM50649 662471 - 662812 + | hypothetical protein SpyM50650 662809 - 663321 + | putative phage membrane protein SpyM50651 663308 - 663493 + | hypothetical protein SpyM50652 663521 - 663763 + | putative phage membrane protein TERM 772 664042 - 664032 - g 86 -4.6 -5.48213 | opp_overlap 664034, overlap 664034 GAGCCAAAAGAAAAA GGCA AAG CGCC TGCTATGATTGTTTT SpyM50653 663753 - 664517 + | phage DNA methylase TERM 773 664810 - 664824 + G 83 -6.4 -5.04987 | AGGCAGTGATCAAGT CATTGC TGA GCAGTG TTTTTTAAAAGTATT SpyM50654 664565 - 664858 + | hypothetical protein SpyM50655 664855 - 665376 + | hypothetical protein TERM 774 665750 - 665718 - f 83 -6.3 -5.1285 | opp_overlap 665743, overlap 665723 665743 AAAAAACAAAAGAAA GAGAGGGCTTTTCTC CAC AAAAAAAGCCAGCTC ACAGCTGACTCCTTA TERM 775 665759 - 665743 - f 100 -8.7 -5.60993 | opp_overlap 665743, overlap 665723 665718 TTCTCCACAAAAAAA GCCAGCT CAC AGCTGAC TCCTTAGTTAATAAT SpyM50657 665810 - 666229 + | putative phage DNA-binding protein TERM 776 666381 - 666365 - g 91 -6.5 -5.37043 | opp_overlap 666365 666364, overlap 666367 AGGGCAGATAAAAAA GGTACCC ACC GGGTAGC ATTTGACAGAAATAA SpyM50658 666338 - 666682 + | HNH endonuclease family phage protein SpyM50659 666831 - 667187 + | hypothetical protein TERM 777 667201 - 667226 + G 87 -8.3 -4.59773 | GAATTATATGGGTAT GGGCTATCTTC GTAG GAAGTTAGCTC TTTTTAAAACTGGAG SpyM50660 667184 - 668452 + | hypothetical protein SpyM50661 668445 - 669938 + | hypothetical protein SpyM50662 669944 - 670168 + | hypothetical protein TERM 778 670169 - 670189 + F 78 -6.2 -4.77165 | gap 1, opp_overlap 670169 AACGCAATATATTAA GCACCTAGA GCAA TCT-GGTGC TTTTCTTATGCCCAA SpyM50663 670245 - 670397 + | hypothetical protein SpyM50664 670390 - 670656 + | hypothetical protein SpyM50665 670658 - 670894 + | hypothetical protein TERM 779 670901 - 670916 + F 81 -5.4 -5.19328 | opp_overlap 670887 670901 TCAACTTAAACCAAA GTCGTA GCAA TACGGC TTTTTATTGTGCCCT SpyM50666 670976 - 672391 + | putative phage terminase TERM 780 672397 - 672412 + F 86 -6.8 -5.1861 | opp_overlap 672397 CAGCTGTTAAAAATT GCATCC GAAA GGGTGC TTTTTTAATGCTAAA TERM 781 672613 - 672598 - g 93 -9 -5.22039 | opp_overlap 672598 TTGAAACCGAAAAAA GCAGCT TACA AGCTGC TTTGAATGATGCTAA TERM 782 672598 - 672613 + G 76 -9 -3.69323 | opp_overlap 672598 TTGAAACCGAAAAAA GCAGCT TACA AGCTGC TTTGAATGATGCTAA SpyM50667 672462 - 672923 + | hypothetical protein TERM 783 673718 - 673708 - g 75 -5.4 -4.68908 | GTTATGCAAAACAAA TTCC AAT GGAA ATCATTAAATACGGT SpyM50668 672948 - 673859 + | hypothetical protein SpyM50669 673859 - 674059 + | hypothetical protein SpyM50670 674069 - 674491 + | hypothetical protein SpyM50671 674451 - 674789 + | hypothetical protein TERM 784 675003 - 674991 - g 87 -6.3 -5.20154 | AGATAATTCAAAAAA CAACA CAT TGTTG AAGGCGGTGCGATGA SpyM50672 674782 - 675018 + | hypothetical protein TERM 785 675049 - 675071 + G 89 -5.6 -5.42259 | gap 1, opp_overlap 675054 ATCAAAAAATATTTA GACGAGCAC TTAGAT GTGC-CGTC TTTTTTTGAACATCA TERM 786 675111 - 675091 - g 82 -6.2 -4.87626 | TTTGAACATCAAAAA GATGAACC TGCAC GATTCATC ATCTTAGAAAAGACT SpyM50673 675019 - 675354 + | hypothetical protein TERM 787 675432 - 675445 + G 70 -9.5 -2.52464 | opp_overlap 675412 GGGGCGATTTATTCG GCGCC ACTC GGCGC TAAATTGCCGAAAAA SpyM50674 675366 - 675944 + | putative phage tail protein TERM 788 676203 - 676187 - g 79 -6.7 -4.65182 | opp_overlap 676186 TAGAAATCAAAGAAA TTTTTGA AAG TCAAAAA GATTTAAAAAACTAG SpyM50675 675955 - 676218 + | hypothetical protein TERM 789 676302 - 676326 + G 100 -12.2 -4.82154 | opp_overlap 676302 ATATATGATTACAAA CAGCTACCTG CTTAT CAGGTGGCTG TTTTTGCTGTCGGTT TERM 790 676326 - 676302 - g 86 -10 -4.01184 | opp_overlap 676302 ATATATGATTACAAA CAGCTACCTG CTTAT CAGGTGGCTG TTTTTGCTGTCGGTT SpyM50676 676233 - 676604 + | hypothetical protein SpyM50677 676604 - 678961 + | putative phage tail protein SpyM50678 678958 - 679653 + | hypothetical protein TERM 791 679792 - 679833 + G 84 -8.2 -4.67904 | gap 1, opp_overlap 679789 679792 679800, overlap 679800 TAAAAAAAGGAATAA TCCTAGA-AGCTGATGATC TGCAT GGTCCTCAGCTTTTTAGGA TTTTTGAAATTACTA TERM 792 679800 - 679824 + G 80 -6.4 -4.7657 | opp_overlap 679792 679789 679800, overlap 679792 GGAATAATCCTAGAA GCTGATGATC TGCAT GGTCCTCAGC TTTTTAGGATTTTTG TERM 793 680202 - 680186 - g 83 -5.1 -5.20333 | CATGTACAAGAAAAA CCTCAAA TCT TATGAGG AAACAGATACTATCA SpyM50679 679650 - 681611 + | hypothetical protein TERM 794 682283 - 682271 - g 79 -5.5 -4.84359 | CGAGGGTCAGAAAAA GCGCT AGG AACGC TAAAAATTACTCATG SpyM50680 681608 - 682624 + | phage hyaluronoglucosaminidase TERM 795 682843 - 682879 + G 76 -10.9 -2.74144 | opp_overlap 682843 682846, overlap 682842 AAAGTTACCACTCAA CAAGCTTTTGGACTAGC TCA GCAGGTCAAAGAGCTTG ATTTACAGCTAAAAG SpyM50681 682639 - 684423 + | hypothetical protein TERM 796 684681 - 684650 - g 77 -5.2 -4.93296 | gap 1, overlap 684665 TGATGAGCACAAAAA CATCAAGC-TAGCAG ACC CCGCTAAACTCGACG AGTTCAACGGCCTAC SpyM50682 684435 - 684863 + | hypothetical protein SpyM50683 684866 - 685498 + | hypothetical protein TERM 797 685527 - 685560 + G 84 -6.8 -4.93696 | gap 2, opp_overlap 685529, overlap 685534 CACTTTGATTTACTA CAGGCA-G-GAGCTGC GGCA GCGGCTCTCATGTCTG TTTTTGGTCTTTGGA SpyM50684 685509 - 685808 + | putative phage membrane protein SpyM50685 685805 - 685990 + | putative phage membrane protein SpyM50686 685994 - 686107 + | putative phage membrane protein TERM 798 687237 - 687214 - g 71 -6.6 -4.03696 | opp_overlap 687205, overlap 687207 687216 687218 AACAAGTATGACAAA CAGACCGACA TCAG TGTCGGGCAG TCTGACAAGATTGAT TERM 799 687233 - 687218 - g 72 -9 -3.3663 | opp_overlap 687205, overlap 687216 687214 687207 AGTATGACAAACAGA CCGACA TCAG TGTCGG GCAGTCTGACAAGAT SpyM50687 686104 - 687327 + | putative phage lysin TERM 800 687348 - 687373 + F 78 -3.8 -5.31855 | opp_overlap 687349 687350, overlap 687350 CTTAAGATAAGACAA ATGCCCTCGC TTTTTT GCGGGGGCTG TTTTTGTTATTAATA TERM 801 687371 - 687350 - f 71 -8.6 -3.19582 | opp_overlap 687348 687350, overlap 687349 TAAGATAAGACAAAT GCCCTCGC TTTTTT GCGGGGGC TGTTTTTGTTATTAA TERM 802 687350 - 687371 + F 90 -10.8 -4.27297 | opp_overlap 687350 687349, overlap 687348 TAAGATAAGACAAAT GCCCTCGC TTTTTT GCGGGGGC TGTTTTTGTTATTAA SpyM50688 687362 - 687472 + | putative phage membrane protein TERM 803 687482 - 687509 + F 82 -7.8 -4.40561 | opp_overlap 687482 687481, overlap 687478 687484 GCTTGAATTTATAAG TTTCAAGACACG ATCT TGTGTCTTGACA TTATTTTTAAAAAAA TERM 804 687484 - 687507 + F 75 -10.4 -2.53831 | opp_overlap 687482 687481, overlap 687482 687478 TTGAATTTATAAGTT TCAAGACACG ATCT TGTGTCTTGA CATTATTTTTAAAAA SpyM50689 687614 - 688585 + | putative DNA-binding phage protein TERM 805 688595 - 688625 + F 100 -8.2 -6.08342 | opp_overlap 688599 688602 AAATAGAATTTTTTA GCAAGAATCGCCTG ACA CTAGCGACTCTTGC TTTTTTTATTTGTTG TERM 806 688690 - 688705 + F 93 -6.8 -5.65927 | overlap 688688 AAAGCTATTTTTTCC CAGCCT ATGT GGGCTG TTTTTTATTTGCCTA SpyM50690 688769 - 688969 + | CsbD-like phage protein TERM 807 689010 - 688967 - f 95 -8.3 -4.88326 | opp_overlap 688978 689008 AAAGAAAAACTAAAA TAATAAACCAACCGCTCTC TTGATT GAGGGCGGTTTTTTTATTA GATGCTAATTATAGT TERM 808 688978 - 688999 + F 100 -9.4 -5.8187 | opp_overlap 688967 AAAATAATAAACCAA CCGCTCTC TTGATT GAGGGCGG TTTTTTTATTAGATG SpyM50691 689191 - 689985 + | streptococcal phage DNAse TERM 809 689993 - 690019 + F 82 -6.7 -5.04385 | opp_overlap 689986 689993 ATCAATAATAAACAT GCCAAATCT TTTCTCACT AGATTTGGC TTTTTTACGAATATA SpyM50692 690051 - 690233 + | hypothetical protein TERM 810 690432 - 690473 + F 100 -11.1 -5.88197 | opp_overlap 690435 690436, overlap 690435 690436 ATAATTCGTCTAGAA AAATCTTGTTGCTATCGAT GTTT ATTGATAGCGACAAGGTTC TTTTTTTATATTTGG TERM 811 690435 - 690470 + F 100 -12.8 -4.94703 | opp_overlap 690435 690436, overlap 690432 690436 ATTCGTCTAGAAAAA TCTTGTTGCTATCGAT GTTT ATTGATAGCGACAAGG TTCTTTTTTTATATT TERM 812 690470 - 690435 - f 78 -6.2 -4.83169 | opp_overlap 690435 690432 690436, overlap 690436 ATTCGTCTAGAAAAA TCTTGTTGCTATCGAT GTTT ATTGATAGCGACAAGG TTCTTTTTTTATATT TERM 813 690469 - 690436 - f 80 -9.7 -3.49419 | opp_overlap 690435 690432 690436, overlap 690435 TTCGTCTAGAAAAAT CTTGTTGCTATCGAT GTTT ATTGATAGCGACAAG GTTCTTTTTTTATAT TERM 814 690436 - 690469 + F 100 -14.1 -3.53161 | opp_overlap 690436 690435, overlap 690435 690432 TTCGTCTAGAAAAAT CTTGTTGCTATCGAT GTTT ATTGATAGCGACAAG GTTCTTTTTTTATAT SpyM50693 690765 - 692627 + | putative cation-transporting ATPase SpyM50694 692699 - 692872 + | hypothetical protein TERM 815 692876 - 692909 + T 100 -14.1 -5.1615 | gap 1, opp_overlap 692876 TTCCCATTTTAAAAA GCTTGGAAA-GTGTAC AAA GTGCACATTTCCAAGC TTTTTTGACTATTAA TERM 816 692909 - 692876 - T 100 -12.7 -4.62069 | gap 1, opp_overlap 692876 TTCCCATTTTAAAAA GCTTGGAAAGTGTACA AAG TGCACA-TTTCCAAGC TTTTTTGACTATTAA pyrD 693862 - 692927 - | dihydroorotate dehydrogenase 1A TERM 817 693031 - 693049 + g 75 -10.3 -3.12668 | opp_overlap 693028 GCTCAAAGATAGCTG GCCCTTC TTGAT GAAGGGC TGTTCCAATTTGGAC TERM 818 693510 - 693520 + g 73 -6.8 -4.18094 | CCCTCATAATCTGAA GCCA TGA TGGC TTTTAAAATGGTTTC TERM 819 694772 - 694758 - g 70 -3.6 -4.84274 | overlap 694759 GAATTAGATGAAAAA CTTAAC ATT GTTAAA GAATACTACCTTGGT gpmA 694101 - 694796 + | phosphoglyceromutase TERM 820 694797 - 694828 + F 84 -11 -3.61902 | opp_overlap 694805, overlap 694805 CTTGGTGGTGAATAA CTTAAAAACCAGAC TTTG GTCTGGTTTTTTGG TTCTATATCCTAAGA TERM 821 694820 - 694805 - f 100 -9 -4.8143 | opp_overlap 694797 694805 TGAATAACTTAAAAA CCAGAC TTTG GTCTGG TTTTTTGGTTCTATA TERM 822 694805 - 694820 + F 100 -9 -5.35354 | opp_overlap 694805, overlap 694797 TGAATAACTTAAAAA CCAGAC TTTG GTCTGG TTTTTTGGTTCTATA SpyM50697 694903 - 695424 + | hypothetical protein TERM 823 695631 - 695642 + G 70 -5.8 -4.42238 | ATACCTCTATTTTGG TCGC ATTT GCGA TTTTGATTCCGATAA SpyM50698 695585 - 696127 + | hypothetical protein TERM 824 696156 - 696187 + F 100 -10.3 -5.01732 | gap 1, opp_overlap 696156 696159, overlap 696159 696162 ATAGTTATATGATAA TGACGAGCCCTTTC TTGTT GAAAGGGCTTG-CA TTTTTTAGGGAAATT TERM 825 696187 - 696156 - f 72 -8.1 -3.47841 | gap 1, opp_overlap 696156 696159 696162, overlap 696159 ATAGTTATATGATAA TGACGAGCCCTTTC TTGTT GAAAGGGCTTG-CA TTTTTTAGGGAAATT TERM 826 696159 - 696185 + F 90 -13.1 -2.75708 | opp_overlap 696156 696159, overlap 696156 696162 GTTATATGATAATGA CGAGCCCTTTC TTGTT GAAAGGGCTTG CATTTTTTAGGGAAA TERM 827 696185 - 696159 - f 79 -10.9 -2.88069 | opp_overlap 696159 696156 696162, overlap 696156 GTTATATGATAATGA CGAGCCCTTTC TTGTT GAAAGGGCTTG CATTTTTTAGGGAAA TERM 828 696162 - 696182 + F 84 -11.2 -3.52177 | opp_overlap 696159 696156, overlap 696159 696156 ATATGATAATGACGA GCCCTTTC TTGTT GAAAGGGC TTGCATTTTTTAGGG TERM 829 696958 - 696968 + G 76 -3.2 -5.30199 | TAGTGGTAATATTAT TGGT GGA GCCA TTTTTGTTAGTTTTT SpyM50699 696251 - 697030 + | putative formate/nitrite transporter family protein SpyM50700 697590 - 697772 + | hypothetical protein recR 697819 - 698415 + | recombination protein RecR TERM 830 699367 - 699379 + G 72 -3.3 -5.06414 | overlap 699361 AGGTGGTTGTGGGTT GTCCC GTT GTGAC TTTTTCTTAACCCAA ddl 698516 - 699562 + | D-alanyl-alanine synthetase A TERM 831 700129 - 700110 - g 75 -9.4 -3.29704 | overlap 700106 CTTCCACCAAAGATA TGATAGGA GCTG TCCTATCA ACCACTTACAAAACT TERM 832 700713 - 700700 - g 72 -3.1 -5.05782 | gap 1, opp_overlap 700700 700701 700712, overlap 700701 ACGGAGTGGAAAAAA GCAGCC AAT GG-TGC TGATATTTTATCAGA murF 699761 - 701152 + | putative UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase TERM 833 701176 - 701164 - f 73 -6.3 -4.38712 | opp_overlap 701163 TTGATTTTTATAAAA CTTTC AGA GAAAG GCTTGTTCTCTCATG SpyM50704 701232 - 701927 + | hypothetical protein TERM 834 701964 - 701991 + F 74 -2.6 -5.40072 | opp_overlap 701966, overlap 701965 701966 701968 ATCAGCTATAATAAG AAGAGTCTGGGA TGAT TTCCAGGCTCGA TTTTTTTAAAAAAGA TERM 835 701966 - 701989 + F 73 -9.6 -2.89655 | opp_overlap 701966, overlap 701965 701964 701968 CAGCTATAATAAGAA GAGTCTGGGA TGAT TTCCAGGCTC GATTTTTTTAAAAAA prfC 702175 - 703719 + | peptide chain release factor 3 TERM 836 703989 - 704005 + F 71 -5.1 -4.56597 | opp_overlap 703989 TTAAAAGGTTTATAA GGCAG CTTCGCA CTGCC TTTTTAGAAAAGAGA SpyM50706 704026 - 705645 + | DEAD box helicase family protein TERM 837 705648 - 705681 + F 90 -9.1 -4.37658 | opp_overlap 705655, overlap 705655 CAAAGGTGAATAAGC TTAAAGAGAGTTGAT GAGA GTCAGCTCTTTTTAA TTTTCTGAAAAAGTT TERM 838 705655 - 705674 + F 79 -5 -5.1417 | opp_overlap 705655, overlap 705648 GAATAAGCTTAAAGA GAGTTGAT GAGA GTCAGCTC TTTTTAATTTTCTGA SpyM50707 705772 - 707772 + | potassium transport system protein TERM 839 707778 - 707802 + T 100 -8 -5.70761 | opp_overlap 707767 707778 TGAAGCATAAAAAAA TCATTGAGAT GATAA GTCTCAATGA TTTTTCTTTTCTTTT TERM 840 707802 - 707778 - T 100 -7.3 -5.71983 | opp_overlap 707778, overlap 707767 TGAAGCATAAAAAAA TCATTGAGA TGATAAG TCTCAATGA TTTTTCTTTTCTTTT SpyM50708 708074 - 707796 - | hypothetical protein SpyM50709 708840 - 708064 - | hypothetical protein TERM 841 708491 - 708520 + g 70 -2.9 -5.1101 | gap 1, opp_overlap 708492, overlap 708492 708507 CAGAGCATCAAATCA ACTCCTGAA-CGTG GCA CATGGTTTAGGAGA TTTTTTAAATCATCA SpyM50710 708958 - 709698 + | 1-acyl-sn-glycerol-3-phosphate acyltransferase comEA 709897 - 710559 + | putative competence protein TERM 842 711500 - 711510 + G 73 -6.8 -4.26202 | TTACTTGTCTTTTTA TGGG ATG CCCA TTTCTTAATGACTGT TERM 843 711895 - 711905 + G 89 -5.4 -5.39755 | overlap 711880 GCTTATCTTGGTGAT TAGC TTC GCTA TTTTTTATGATTATC TERM 844 712145 - 712109 - g 73 -7.2 -4.07568 | TTCTTTTCTTCAAAA GAGCACTGGCGACGAG GACAT CACGTAGCTAATGCTC AGAAAACCTTAATTC TERM 845 712355 - 712373 + G 76 -11 -2.5294 | overlap 712354 712353 CACGTTAGGGTTTTA GCAGCTGG AGA CCAGTTGC CTATTATGGGAAGTG comEC 710540 - 712783 + | putative competence protein TERM 846 713083 - 713098 + G 76 -7.6 -4.23213 | opp_overlap 713082, overlap 713062 TTGCTGAGCAGAAGG TGGTCA TTTT TGACCA TTTGTTAGATATCAC TERM 847 713156 - 713145 - g 79 -3.6 -5.45802 | opp_overlap 713153, overlap 713153 TTCTTAAAAGAAAAA GACC TAAA GGCC TTTGAAGCCTATTTA holA 712854 - 713894 + | DNA polymerase III subunit delta sodA 713991 - 714596 + | superoxide dismutase TERM 848 714608 - 714628 + T 100 -9.8 -5.13521 | ATAAGAAAAGGGTTT CCAATCTC AAAAA GAGATTGG TTTTTTAAGTGCTTT TERM 849 714794 - 714783 - T 74 -4.4 -4.90002 | TAAGAGAGAAGAAAA CTAC CATT GTAG GGATTATTTTAGGAA TERM 850 715902 - 715877 - T 100 -13.4 -5.14563 | opp_overlap 715877 TTGCTCATTAAAAAA GCTTGACCTG TTTCTT CAGGTCAAGC TTTTTGAGATTAATG TERM 851 715877 - 715902 + T 100 -13.4 -4.67904 | opp_overlap 715877 TTGCTCATTAAAAAA GCTTGACCTG TTTCTT CAGGTCAAGC TTTTTGAGATTAATG SpyM50716 717132 - 715912 - | hypothetical protein queA 718167 - 717139 - | S-adenosylmethionine:tRNA ribosyltransferase-isomerase nagB 718369 - 719118 + | glucosamine-6-phosphate isomerase TERM 852 719764 - 719750 - g 81 -7.2 -4.49389 | overlap 719759 ATTTCAGAAGGAAAA TTTCAC CAA GTGAAA AAAATGTTTTTGACC SpyM50719 719192 - 719908 + | putative ribosomal small subunit pseudouridine synthase A SpyM50721 720203 - 721165 + | competence protein CoiA-like family protein pepB 721178 - 722983 + | putative oligopeptidase TERM 853 723015 - 723069 + F 100 -21.9 -5.40873 | opp_overlap 723028, overlap 723016 GACAAAAAGAGTTTA GGATTGATAGAAATGGAGATTCACA GTTGG TGTGAATCTCCATTTCTATCGGTCA TTTTCTTTTTATATT TERM 854 723016 - 723068 + F 100 -25.4 -3.80863 | opp_overlap 723028, overlap 723015 ACAAAAAGAGTTTAG GATTGATAGAAATGGAGATTCACA GTTGG TGTGAATCTCCATTTCTATCGGTC ATTTTCTTTTTATAT TERM 855 723056 - 723028 - f 100 -14.8 -4.07124 | opp_overlap 723016 723015 TAGGATTGATAGAAA TGGAGATTCACA GTTGG TGTGAATCTCCA TTTCTATCGGTCATT TERM 856 723338 - 723301 - f 71 -5.1 -4.57218 | ATAATAGAATTAAAA TACTAACATTTATGTTT TTTT AAAAATAAACGTTCGTA TAATAAAAAAGGAGT SpyM50723 723359 - 724555 + | major facilitator superfamily protein TERM 857 724599 - 724582 - f 75 -7 -4.24432 | opp_overlap 724582, overlap 724577 AAATTTAAAAGTAAA CCCTAG CAAAGC CTAGGG TTTTTTTATATAATT TERM 858 724582 - 724599 + F 100 -7 -5.75478 | opp_overlap 724582 724577 AAATTTAAAAGTAAA CCCTAG CAAAGC CTAGGG TTTTTTTATATAATT SpyM50724 724621 - 725328 + | O-methyltransferase prsA 725391 - 726446 + | foldase protein PrsA TERM 859 729111 - 729101 - g 89 -6.8 -5.28942 | opp_overlap 729099 729101 729102 729104, overlap 729102 729105 GAGCTTAAAGAAAAA GCAG CAG CTGC AGCAGCTGGTGATGT TERM 860 729122 - 729102 - g 79 -9.7 -3.76281 | opp_overlap 729101 729099 729102 729104, overlap 729101 729105 AGCTTAAAGAAAAAG CAGCAGCTG CAG CAGCTGGTG ATGTCTTTAAAGATG TERM 861 729102 - 729122 + G 70 -9.7 -2.54801 | opp_overlap 729101 729102 729105, overlap 729101 729099 729104 AGCTTAAAGAAAAAG CAGCAGCTG CAG CAGCTGGTG ATGTCTTTAAAGATG TERM 862 729119 - 729105 - g 72 -10 -2.65994 | opp_overlap 729104 729102 729101 729099, overlap 729101 729102 TTAAAGAAAAAGCAG CAGCTG CAG CAGCTG GTGATGTCTTTAAAG alaS 726833 - 729451 + | alanyl-tRNA synthetase TERM 863 729455 - 729492 + F 80 -10.2 -3.61178 | opp_overlap 729454 729464, overlap 729464 GAAACAGTGTAAATC CATAAAAAACCAAGTT ATTTAG AACTTGGTTTTTTATA TTTGAAATGACTACC TERM 864 729483 - 729464 - f 91 -6.5 -5.33866 | opp_overlap 729455 729464, overlap 729454 TAAATCCATAAAAAA CCAAGTT ATTTAG AACTTGG TTTTTTATATTTGAA TERM 865 729464 - 729483 + F 93 -6.5 -5.56264 | opp_overlap 729464 729454, overlap 729455 TAAATCCATAAAAAA CCAAGTT ATTTAG AACTTGG TTTTTTATATTTGAA SpyM50727 729637 - 729771 + | hypothetical protein SpyM50728 729812 - 730027 + | putative DNA-binding protein TERM 866 730516 - 730529 + G 73 -6.7 -4.2018 | overlap 730512 730509 TACAATGCCATTCGG GGAAC CGAT GTTCC TTATTTTCCAAATTT SpyM50729 730024 - 730785 + | hypothetical protein SpyM50730 730804 - 731499 + | CAAX amino protease SpyM50733 732747 - 732454 - | putative transposase for IS element TERM 867 732558 - 732603 + g 77 -4.8 -4.93316 | gap 1, opp_overlap 732567, overlap 732560 732567 TTATCTCAAATTGAG CAT-GACGAAGTGCGCTCCCA TGTCC TGGGAACGCACTTTCTCCATA TTTTTCATATTCTTG TERM 868 732560 - 732601 + g 73 -7.4 -4.06487 | gap 1, opp_overlap 732567, overlap 732558 732567 ATCTCAAATTGAGCA T-GACGAAGTGCGCTCCCA TGTCC TGGGAACGCACTTTCTCCA TATTTTTCATATTCT TERM 869 732593 - 732567 - G 95 -14.5 -3.23395 | opp_overlap 732560 732558 732567 ATTGAGCATGACGAA GTGCGCTCCCA TGTCC TGGGAACGCAC TTTCTCCATATTTTT TERM 870 732567 - 732593 + g 93 -12.3 -4.02468 | opp_overlap 732567, overlap 732560 732558 ATTGAGCATGACGAA GTGCGCTCCCA TGTCC TGGGAACGCAC TTTCTCCATATTTTT SpyM50734 734183 - 732885 - | voltage gated chloride channel TERM 871 734162 - 734140 - G 100 -13.6 -4.77719 | opp_overlap 734144 CAAAAGTTAAGAAAA GAGACTGATA GAT TATCAGTCTC GTGAGCACTATTAGA nrdF 735132 - 734173 - | ribonucleotide-diphosphate reductase subunit beta TERM 872 734672 - 734682 + g 75 -5.4 -4.77173 | AAAGTTTCGAGATAT GTTG AGG CAAC TTTCTTTTGTAAGGC TERM 873 735056 - 735076 + g 70 -8.4 -3.36505 | AGCCAAAATTGTTCG GTCAACTT TTCCC AAGTTGAC TTGTCAATGACGTCT TERM 874 735213 - 735186 - R 79 -8.5 -4.07868 | GGATATCGAGATAAA CCAGTAGAACC GACCAA AGTTCTACCGG TAATAATAAGTTTAA SpyM50737 737624 - 735465 - | ribonucleotide-diphosphate reductase subunit alpha TERM 875 737525 - 737515 - G 81 -5.4 -5.08824 | opp_overlap 737512 737515 TTTTCAGCGAAAAAA GCTT TTA AAGC TTCTTTGTCTTTATG nrdH 737862 - 737644 - | glutaredoxin-like protein TERM 876 737890 - 737906 + H 70 -8.1 -3.29649 | opp_overlap 737887 TAAAATTAGTAATGG TTCCATT TTA AATGGAA TTACTATAATAGCAT TERM 877 738133 - 738122 - H 70 -3 -5.10163 | AACGTGAAAATAAAA GAAA ATAA TTTC ACATTTTTTGTCGTT ptsH 738255 - 738518 + | phosphocarrier protein HPr TERM 878 739294 - 739279 - g 76 -3.2 -5.28942 | TATGCCAAACAAAAA GCAGAG TGGT CTCTCC TTAAAGATGCGCATA TERM 879 739778 - 739765 - g 72 -3.1 -5.1356 | TTTGACGAAGAAAAA GCAAA CTTG CTTGC AGAAGGCGTTGCGGT pstI 738523 - 740256 + | phosphoenolpyruvate-protein phosphotransferase TERM 880 740266 - 740285 + F 100 -8.6 -5.1675 | opp_overlap 740266 GATTAAAGGGTTAAA GAGTTGGT TTAA ACCAGCTC TTTTTTGCTAGCTAA TERM 881 741425 - 741435 + G 73 -5.4 -4.64334 | CCATTAATTGATACG TCAG CTG CTGA TTTTGTTGAAGGGTT gapN 740441 - 741868 + | putative NADP-dependent glyceraldehyde-3-phosphate dehydrogenase TERM 882 741913 - 741878 - f 100 -12.2 -6.13503 | opp_overlap 741878 CAGTAATAAAAAAAA TAAACAAAAAGTTAGG TTAA CTTAACTTTTTGTTTA TTTTTTTAATGTTTT TERM 883 741878 - 741913 + F 100 -14.4 -5.69023 | opp_overlap 741878 CAGTAATAAAAAAAA TAAACAAAAAGTTAGG TTAA CTTAACTTTTTGTTTA TTTTTTTAATGTTTT SpyM50742 741963 - 743237 + | polysaccharide deacetylase family protein TERM 884 743273 - 743308 + T 100 -13.6 -4.73388 | opp_overlap 743276 743279, overlap 743276 TAGAATTGATATACT AAACAATCCAATTACT TTGA AGTAATTGGATTGTTG TTTTTAGTAGCCCTT TERM 885 743305 - 743276 - T 100 -15.3 -3.89614 | opp_overlap 743273 743276, overlap 743279 AATTGATATACTAAA CAATCCAATTACT TTGA AGTAATTGGATTG TTGTTTTTAGTAGCC TERM 886 743276 - 743305 + T 100 -15.3 -4.47707 | opp_overlap 743276 743279, overlap 743273 AATTGATATACTAAA CAATCCAATTACT TTGA AGTAATTGGATTG TTGTTTTTAGTAGCC TERM 887 743302 - 743279 - T 89 -11.2 -4.06993 | opp_overlap 743276 743273, overlap 743276 TGATATACTAAACAA TCCAATTACT TTGA AGTAATTGGA TTGTTGTTTTTAGTA SpyM50743 744432 - 743347 - | ATP-dependent RNA helicase TERM 888 743827 - 743816 - G 72 -4.4 -4.68994 | opp_overlap 743816 ACCATGAGGTAAAAA TGCT GAAT AGCA TCGTTGGTTTGCTCT udk 744530 - 745156 + | uridine kinase TERM 889 745168 - 745190 + F 85 -7.1 -4.9645 | ATAGTGGAAGTGGCT GAGTAGATT ATTTA AATCTGCTC TTTTATTGTTGTGCT SpyM50745 745236 - 745499 + | hypothetical protein SpyM50746 746361 - 745552 - | hypothetical protein SpyM50747 746506 - 747003 + | hypothetical protein TERM 890 747107 - 747123 + G 79 -5.1 -5.06451 | overlap 747101 AGTTGAATCTGGCAA GATTAGC CAT GCTTATC TTTTTTCAGGTCCTA dnaH 747003 - 748673 + | DNA polymerase III subunits gamma and tau TERM 891 748710 - 748689 - T 84 -10.2 -3.77906 | opp_overlap 748688 748687, overlap 748686 AACTGAAATACATAA GGGTAAGG TTTTGC CCTTACCC ACGTTTTATCTCGTT birA 749888 - 748947 - | biotin--protein ligase TERM 892 749087 - 749111 + g 93 -8 -5.38054 | opp_overlap 749086, overlap 749093 TATTTTCTATAAAGG TCACTTGTTT ATTAA GAACAAGTGA TTTTTCTTTGTAAAC TERM 893 749279 - 749268 - G 80 -4.4 -5.24129 | GTCGGTGACAAAAAA GTTG AGAC CAAC CCCAATAATGACATC TERM 894 752301 - 752288 - g 76 -4.5 -5.09204 | ACAGCTGAAGAAAAA GCAGC TATG GCTAC TAAGGCGAAAGAAAG SpyM50750 750092 - 752470 + | putative lipoprotein TERM 895 752538 - 752557 + F 100 -7.9 -5.44119 | opp_overlap 752538 TGACTATCAAGAGAA CCTCAAG AATAAC CTTGAGG TTTTTTTGAAATAAA TERM 896 752557 - 752538 - f 78 -8.6 -3.72742 | opp_overlap 752538 TGACTATCAAGAGAA CCTCAAGA ATAA CCTTGAGG TTTTTTTGAAATAAA TERM 897 752829 - 752850 + F 73 -9.5 -2.79684 | gap 1, opp_overlap 752828, overlap 752833 GTCTGGTTAATGGAC GCTAG-CCAC TAG GTGGACTAGC TAGTTGCCTTACTAG metK 753007 - 754203 + | S-adenosylmethionine synthetase TERM 898 754224 - 754252 + F 84 -3.2 -5.64873 | overlap 754251 AATTTTATTAAAAAA GTAGAGTGAG TGAAAAAAT CTTACTCTGC TTTTTTGTTATTAAA TERM 899 755399 - 755369 - g 86 -9 -4.40237 | CACTATATATGAAAA GCGCATTAACCATG TGC CAGAGTTGATGCGC ATGGGAGCAGATATC murA2 754377 - 755636 + | UDP-N-acetylglucosamine 1-carboxyvinyltransferase TERM 900 755638 - 755655 + F 100 -9.9 -5.48063 | opp_overlap 755638 TAATCGAAGACTAAA GAGAAGC TAAC GCTTCTC TTTTTTATATTACAT TERM 901 755655 - 755638 - f 85 -9.9 -3.94853 | opp_overlap 755638 TAATCGAAGACTAAA GAGAAGC TAAC GCTTCTC TTTTTTATATTACAT graB 755994 - 756833 + | putative surface-anchored protein (protein G-related alpha 2M-binding protein) TERM 902 756862 - 756879 + F 80 -6.3 -5.00846 | opp_overlap 756855 756862, overlap 756855 TAGCAAATGAAACAA GGGAATC GAAA GATTCTC TTTTTCTGATATTTA TERM 903 757092 - 757102 + G 79 -3.2 -5.42259 | ATTTGGACAAAGCTT GCAG TGT TTGC TTTTTTTGAGACTCC TERM 904 757541 - 757518 - g 76 -4.6 -5.13521 | opp_overlap 757519, overlap 757507 757519 AAAGTAGCTAAAAAA GCAGGTTTTC AACT AAAAACCTGT TTTAAAGGAAGTGAT TERM 905 757519 - 757540 + G 73 -7.4 -4.08216 | opp_overlap 757507 757518 757519 AAGTAGCTAAAAAAG CAGGTTTT CAACTA AAAACCTG TTTTAAAGGAAGTGA TERM 906 757540 - 757519 - g 70 -8.1 -3.66486 | opp_overlap 757519, overlap 757507 757518 AAGTAGCTAAAAAAG CAGGTTTTC AACT AAAAACCTG TTTTAAAGGAAGTGA SpyM50754 757071 - 757613 + | acetyltransferase (GNAT) family protein SpyM50755 757622 - 758905 + | putative DNA-binding protein SpyM50756 758921 - 759781 + | methionine aminopeptidase TERM 907 759935 - 759948 + G 71 -3.9 -4.88407 | CTTTCCATTAATTGT TATTG CAGC CAATA TTTTTCCTTACCTCA SpyM50757 759783 - 760748 + | ribonuclease BN-like family protein TERM 908 760770 - 760797 + F 91 -6.4 -5.252 | AAAGATAATAAGTCG TGGAGTGAGAAA CTAT TTTCTTGCTTCA TTTTTTATGAGGATG aroA 760850 - 762142 + | 3-phosphoshikimate 1-carboxyvinyltransferase TERM 909 762483 - 762473 - g 81 -5.4 -5.02201 | opp_overlap 762473 AAAACATGATAAAAA GTCT CAA AGAC CTCTATTTCTTAAGT aroK 762135 - 762626 + | shikimate kinase TERM 910 763890 - 763877 - g 71 -3.8 -4.8622 | CCTGCGAATGAAAAA TGGG GTTGTT CCCA ACCAAACCATCGAAG SpyM50760 762834 - 764285 + | cell envelope-related function transcriptional attenuator TERM 911 764299 - 764322 + F 95 -8.2 -5.02074 | opp_overlap 764299 764302 764314, overlap 764314 AAGATATGGTATAAT GGAGAGTAAC TAAA GTTGCTCTTC TTTTTTGAGCAATGG SpyM50761 764334 - 765722 + | putative RNA methyltransferase TERM 912 765950 - 765928 - f 74 -4.1 -5.1925 | CCATAAGGTAAAAAA GTAGCAGAA TTCAT TTCAGCCAC AAAGGTTTCCCCTGT SpyM50763 766524 - 766925 + | thioesterase superfamily protein TERM 913 766990 - 766934 - T 100 -32.3 -3.39895 | opp_overlap 766950, overlap 766950 CGGGTGATTAATGAA TCAATAAAGGAAAAAAGTCCCAACTCT CTG AGAATTGGGACTTTTTTCCTTTATTGA GAGATACCATAAACC TERM 914 766974 - 766950 - T 100 -13.7 -5.46129 | opp_overlap 766950, overlap 766934 CAATAAAGGAAAAAA GTCCCAACTCT CTG AGAATTGGGAC TTTTTTCCTTTATTG TERM 915 766950 - 766974 + T 100 -11.5 -5.46129 | opp_overlap 766934 766950 CAATAAAGGAAAAAA GTCCCAACTCT CTG AGAATTGGGAC TTTTTTCCTTTATTG TERM 916 766997 - 767028 + T 100 -12.4 -4.44046 | gap 1, opp_overlap 767004 CTTTATTGAGAGATA CCATAAACCACCCGT TAG ACGGGTGGTT-ACGG TTTATTTACGGTAAA TERM 917 767022 - 767004 - T 100 -14.6 -4.05389 | opp_overlap 766997 GAGAGATACCATAAA CCACCCGT TAG ACGGGTGG TTACGGTTTATTTAC SpyM50764 768514 - 767030 - | hypothetical protein TERM 918 768797 - 768812 + H 100 -7.6 -5.49809 | TTTGATGGACTTGCG GACTTG TTTC CAAGTC TTTTTTTGACCTTTG SpyM50766 768888 - 770108 + | major facilitator superfamily protein TERM 919 770167 - 770220 + T 83 -6.3 -5.13722 | gap 1, opp_overlap 770181, overlap 770181 GCTATTTTATTGATT GAGA-TAAGCAAAAAGGTAAGCACTT AGG GATTGCTTACCTTTTTGGTTCTTTTC TTTTGTTTTACTCCG TERM 920 770205 - 770181 - T 85 -7.2 -4.96646 | opp_overlap 770181 770167 TGAGATAAGCAAAAA GGTAAGCACT TAGGG ATTGCTTACC TTTTTGGTTCTTTTC TERM 921 770181 - 770205 + T 93 -7.9 -5.07971 | opp_overlap 770181, overlap 770167 TGAGATAAGCAAAAA GGTAAGCACTT AGG GATTGCTTACC TTTTTGGTTCTTTTC SpyM50767 770593 - 770228 - | hypothetical protein TERM 922 770791 - 770779 - g 72 -3.4 -5.00884 | overlap 770765 ACTTCTCTTAAAAAA GAAG GCTAT CTTC GTCAATCAAAAGGTT SpyM50768 770705 - 771439 + | putative ribosomal small subunit pseudouridine synthase B SpyM50771 772504 - 772211 - | putative transposase TERM 923 772315 - 772360 + g 77 -4.8 -4.93316 | gap 1, opp_overlap 772324, overlap 772317 772324 TTATCTCAAATTGAG CAT-GACGAAGTGCGCTCCCA TGTCC TGGGAACGCACTTTCTCCATA TTTTTCATATTCTTG TERM 924 772317 - 772358 + g 73 -7.4 -4.06487 | gap 1, opp_overlap 772324, overlap 772315 772324 ATCTCAAATTGAGCA T-GACGAAGTGCGCTCCCA TGTCC TGGGAACGCACTTTCTCCA TATTTTTCATATTCT TERM 925 772350 - 772324 - G 95 -14.5 -3.23395 | opp_overlap 772324 772317 772315 ATTGAGCATGACGAA GTGCGCTCCCA TGTCC TGGGAACGCAC TTTCTCCATATTTTT TERM 926 772324 - 772350 + g 93 -12.3 -4.02468 | opp_overlap 772324, overlap 772317 772315 ATTGAGCATGACGAA GTGCGCTCCCA TGTCC TGGGAACGCAC TTTCTCCATATTTTT SpyM50772 773892 - 772582 - | dicarboxylate carrier protein TERM 927 774737 - 774765 + G 70 -8.7 -3.28173 | opp_overlap 774752, overlap 774735 774738 GAAGTGGAAAGCCTT GCTGCTGCCGAAG AAG CTGCGGCGGCGGG TGTTGATATTATCAT TERM 928 774738 - 774764 + G 81 -12.2 -2.56181 | opp_overlap 774752, overlap 774737 774735 AAGTGGAAAGCCTTG CTGCTGCCGAAG AAG CTGCGGCGGCGG GTGTTGATATTATCA nadC 774116 - 774988 + | nicotinate-nucleotide pyrophosphorylase TERM 929 775291 - 775335 + T 100 -15.4 -4.62054 | opp_overlap 775288 775297, overlap 775292 775297 TTGGACAAATAATTA TTGAAAGGATTTAGTTCTGT ATTGG ACAGGACTAAATCCTTTTAG TTTTGCTTTGATTCG TERM 930 775292 - 775334 + T 100 -16.7 -3.36148 | opp_overlap 775288 775297, overlap 775291 775297 TGGACAAATAATTAT TGAAAGGATTTAGTTCTGT ATTGG ACAGGACTAAATCCTTTTA GTTTTGCTTTGATTC TERM 931 775329 - 775297 - T 93 -12.2 -3.74658 | opp_overlap 775292 775291 775297, overlap 775288 AAATAATTATTGAAA GGATTTAGTTCTGT ATTGG ACAGGACTAAATCC TTTTAGTTTTGCTTT TERM 932 775297 - 775329 + T 100 -14.4 -4.74084 | opp_overlap 775297 775288, overlap 775292 775291 AAATAATTATTGAAA GGATTTAGTTCTGT ATTGG ACAGGACTAAATCC TTTTAGTTTTGCTTT SpyM50774 776091 - 775288 - | isertion sequence IS861 putative transposase SpyM50775 776627 - 776112 - | insertion sequence IS861 putative transposase TERM 933 776536 - 776561 + g 70 -7.7 -3.75665 | overlap 776537 TTGAGATCGGATTCT GCCATATCAAA CTTT TTTGATATGGA TTTAATGGACTCTCC TERM 934 776537 - 776560 + g 80 -11.2 -2.85078 | overlap 776536 TGAGATCGGATTCTG CCATATCAAA CTTT TTTGATATGG ATTTAATGGACTCTC TERM 935 776678 - 776635 - H 100 -7.6 -5.63504 | gap 1, opp_overlap 776648, overlap 776637 AATTTCATAAAAAAA TAGCACCCCAATCGTTAGA TTTTGTG TCTAACTTTTGGGGTGC-A GTTCACCAGACGAGG TERM 936 776677 - 776637 - H 100 -12.7 -4.45201 | opp_overlap 776648, overlap 776635 TTTCATAAAAAAATA GCACCCCAATCGTTAGA TTTTGTG TCTAACTTTTGGGGTGC AGTTCACCAGACGAG SpyM50776 776869 - 776997 + | hypothetical protein TERM 937 777003 - 777014 + F 81 -3.6 -5.44119 | ATTAATGTAAGGAAA CGCT GAAA GGCG TTTTTTTAAAGTAAA TERM 938 777950 - 777935 - g 77 -6.2 -4.65078 | AGAGGCTCAAGAAAA CTTGAA AGCC TTCAAG AAAAAATTGGCTGCC TERM 939 777968 - 777957 - g 86 -4.4 -5.4505 | GCCTTCAAGAAAAAA TTGG CTGC CCAA TATGACGAGTTTGAT obgE 777054 - 778367 + | GTPase ObgE SpyM50778 778436 - 778594 + | hypothetical protein TERM 940 778572 - 778614 + T 91 -5 -5.84381 | opp_overlap 778582, overlap 778574 778582 GCTTAGAACGTGAAA AATTGAAAAAGGATGAGG CTTAGGC CCTCATCCTTTTTTGACC TTTTTTTCTTGGTAA TERM 941 778574 - 778612 + T 85 -12 -3.03774 | opp_overlap 778582, overlap 778572 778582 TTAGAACGTGAAAAA TTGAAAAAGGATGAGG CTTAGGC CCTCATCCTTTTTTGA CCTTTTTTTCTTGGT TERM 942 778582 - 778604 + T 100 -9.2 -5.16472 | opp_overlap 778582, overlap 778574 778572 TGAAAAATTGAAAAA GGATGAGG CTTAGGC CCTCATCC TTTTTTGACCTTTTT TERM 943 778604 - 778582 - T 100 -9.2 -4.92239 | opp_overlap 778582 778574 778572 TGAAAAATTGAAAAA GGATGAGG CTTAGGC CCTCATCC TTTTTTGACCTTTTT SpyM50779 779306 - 778599 - | nicotinamide mononucleotide transporter SpyM50780 779519 - 780919 + | putative beta-glucosidase SpyM50781 780928 - 782022 + | outer surface protein SpyM50782 782128 - 784122 + | putative regulatory protein SpyM50783 784145 - 784456 + | PTS system, cellobiose-specific IIB component SpyM50784 784459 - 784794 + | PTS system, cellobiose-specific IIA component SpyM50785 784791 - 785225 + | hypothetical protein TERM 944 786336 - 786322 - g 82 -11.4 -3.21593 | opp_overlap 786321 786319, overlap 786309 786320 CAGCTGCTTACAATA CAGCGC ATA GCGCTG CTAATTTACCATACC SpyM50786 785418 - 786797 + | sugar phosphotransferase system (PTS), IIC component TERM 945 786793 - 786780 - f 76 -2.3 -5.47159 | GCCAATAAAGAAAAA GCGAG TGAC CTTGC ATGACAGAAAAAAAT SpyM50787 786794 - 786946 + | hypothetical protein TERM 946 787000 - 786951 - T 73 -2.4 -5.25803 | gap 1, opp_overlap 786954 786957, overlap 786952 786954 786956 AACGCCCATAAAAAA GCATAGGGGACACTCTTATGA AGGAGAGAG TCATAAGAGTATCCC-TATTT TGCTGGTTTGAATAA TERM 947 786997 - 786954 - T 70 -8.5 -3.44801 | gap 1, opp_overlap 786954 786957, overlap 786952 786951 786956 GCCCATAAAAAAGCA TAGGGGACACTCTTATGA AGGAGAGAG TCATAAGAGTATCCC-TA TTTTGCTGGTTTGAA TERM 948 786954 - 786997 + T 73 -6.3 -4.39386 | gap 1, opp_overlap 786954 786952 786951 786956, overlap 786957 GCCCATAAAAAAGCA TAGGGGACACTCTTATGA AGGAGAGAG TCATAAGAGTATCCC-TA TTTTGCTGGTTTGAA TERM 949 786996 - 786956 - T 75 -9.2 -3.28457 | opp_overlap 786954 786957, overlap 786954 786952 786951 CCATAAAAAAGCATA GGGGACACTCTTATGA AGGAGAGAG TCATAAGAGTATCCCT ATTTTGCTGGTTTGA TERM 950 786957 - 786995 + T 86 -10.5 -3.79533 | opp_overlap 786956 786954 786952 786951, overlap 786954 CATAAAAAAGCATAG GGGACACTCTTATGA AGGAGAGAG TCATAAGAGTATCCC TATTTTGCTGGTTTG TERM 951 787027 - 787062 + T 95 -8.4 -5.055 | opp_overlap 787033, overlap 787030 787033 ATAATAACAGTAACC AAAAAAGGCAAGGAGA TAGG TTTCCTTGCCTTATTA TTTTTTGGAAGTTAG TERM 952 787030 - 787059 + T 91 -10.1 -4.62085 | opp_overlap 787033, overlap 787027 787033 ATAACAGTAACCAAA AAAGGCAAGGAGA TAGG TTTCCTTGCCTTA TTATTTTTTGGAAGT TERM 953 787056 - 787033 - T 100 -9.6 -5.31059 | opp_overlap 787033 787030 787027 ACAGTAACCAAAAAA GGCAAGGAGA TAGG TTTCCTTGCC TTATTATTTTTTGGA TERM 954 787033 - 787056 + T 95 -11.8 -4.40692 | opp_overlap 787033, overlap 787030 787027 ACAGTAACCAAAAAA GGCAAGGAGA TAGG TTTCCTTGCC TTATTATTTTTTGGA glnQ1 787834 - 787094 - | putative glutamine ABC transporter, ATP-binding protein 1 TERM 955 787447 - 787416 - G 73 -8 -3.85698 | opp_overlap 787430 TGCCCGCCGGATAAA CTTCCTGGGAAGGC GTCG GCCTTATCAGAAAG TCCGACTTTTTCTAG TERM 956 787430 - 787453 + g 84 -6.7 -4.84359 | opp_overlap 787416 ACTTCCTGGGAAGGC GTCGGCCTT ATCAGA AAGTCCGAC TTTTTCTAGAAGTGC TERM 957 787808 - 787818 + g 71 -4 -4.96646 | AGATTTGTGTAAATC TTGA ACA TCAA TTTTTAATTCTGTCA SpyM50789 790008 - 787834 - | putative glutamine ABC transporter,glutamine-binding protein/permease protein TERM 958 789542 - 789553 + g 88 -3 -6.02345 | opp_overlap 789542 TCAAATGTTTTAACA GTAT AATC ATAC TTTTTTTTATAGTTA TERM 959 790104 - 790118 + H 76 -4.3 -5.11937 | opp_overlap 790078 790104, overlap 790078 TGTCATAAAACATAA CATGT AAATG ACATG TTTTTTACGCTTATT TERM 960 791198 - 791210 + G 87 -6.3 -5.33848 | overlap 791197 ATACCTTGTTAGATT TCTTC CCA GAAGA TTTTTTAATTATGAT TERM 961 791547 - 791535 - g 75 -10.5 -2.92267 | overlap 791532 791528 GGGAGAAATTAACCA GCGCG TAG CGCGC GATGAACGGACGTTC uvrB 790201 - 792192 + | excinuclease ABC subunit B SpyM50791 792455 - 792598 + | hypothetical protein dltA 792610 - 794148 + | D-alanine--D-alanyl carrier protein ligase dltB 794145 - 795401 + | putative activated D-alanine transport protein dltC 795419 - 795658 + | D-alanine--poly(phosphoribitol) ligase subunit 2 TERM 962 795703 - 795717 + G 72 -3.6 -5.1166 | TTATTGCCTTTGTTT TAGTAG TGA TTACTA TTTTTAGTTTTCCTA dltD 795651 - 796901 + | putative D-alanyl-lipoteichoic acid biosynthesis protein SpyM50796 796932 - 797915 + | hypothetical protein TERM 963 798169 - 798226 + T 100 -18.1 -4.88918 | opp_overlap 798174, overlap 798153 798147 798174 ACTTTTTTGATATTC AAAAAGCTCTATAATCTCTACAGTGGG TTTA CCCATTCAAGAGATTATAGAGCTTTTG TTTTATTTACGCTGA TERM 964 798174 - 798221 + T 100 -18 -5.34857 | opp_overlap 798174, overlap 798153 798147 798169 TTTGATATTCAAAAA GCTCTATAATCTCTACAGTGGG TTTA CCCATTCAAGAGATTATAGAGC TTTTGTTTTATTTAC TERM 965 798221 - 798174 - T 100 -15.8 -4.70659 | opp_overlap 798153 798147 798174 798169 TTTGATATTCAAAAA GCTCTATAATCTCTACAGTGGG TTTA CCCATTCAAGAGATTATAGAGC TTTTGTTTTATTTAC SpyM50798 799415 - 798429 - | putative transposase TERM 966 799454 - 799465 + G 76 -2.2 -5.4756 | AATTCTAGTATATCA GACG AACA TGTC TTTTTTGTTGCACTT TERM 967 799579 - 799553 - g 93 -9.5 -4.7497 | opp_overlap 799553 CTTATTTATCAAAAA CCTCCTAAAGG GCTTG CCCTTAGAAGG TTTGGTATGTTGTAA SpyM50799 799433 - 799594 + | hypothetical protein malD 800432 - 799596 - | putative maltose/maltodextrin ABC transport system permease protein TERM 968 800358 - 800345 - G 71 -6.7 -3.99775 | overlap 800354 AGCTAGTAAGAATAA CCCAA GCGA TTGGG AAGAGCCAAATGATT malC 801793 - 800432 - | putative maltose/maltodextrin ABC transport system permease protein TERM 969 800909 - 800897 - G 79 -4.8 -5.01497 | opp_overlap 800897 AGGATCAGATAAAAA TGGC AGTGA GCCA TTAATCAAGCCGATT TERM 970 801915 - 801860 - R 95 -13 -3.78775 | opp_overlap 801880, overlap 801902 CTTGTTAGGATGAAA TAGCTAAGTGTTACGTAAACTTTTAA AGAG TTAAAAATTTAAGTAGCACTAAGCTA CTAGTAAAACAAAAA malE 803314 - 802067 - | putative maltose/maltodextrin-binding protein precursor TERM 971 802890 - 802909 + g 79 -8.6 -4.0162 | opp_overlap 802890 802889 GATTCAATACCAAAT GGGAAAGC ATAT GTTTTCCC TTTGTACTGTGCACC TERM 972 803986 - 803971 - g 79 -4.8 -5.0133 | opp_overlap 803973 803978 GATCCTGTCAAAAAA TATTTG ATGA CAAATA ACTTACCATTTGTCA TERM 973 804510 - 804520 + G 78 -4 -5.28166 | CAATGAACAGAATCT TAGT CAG ACTA TTTTTGTTCCTTTTA SpyM50803 803557 - 804576 + | LacI family transcriptional repressor TERM 974 804588 - 804610 + F 81 -4.2 -5.40474 | opp_overlap 804579 TTAAGAGCAAAAAAA GTAGCATTTT TAA GGAATGTTAC TTTTTTTAGGAAACT TERM 975 804633 - 804652 + F 72 -9.4 -2.67515 | opp_overlap 804636, overlap 804636 AGGAAACTGGTTGAC TAACGCAA GCGC TTGCGTTA TAATCTCATCATGAA malM 804691 - 806184 + | putative 4-alpha-glucanotransferase TERM 976 807158 - 807136 - g 73 -5.6 -4.56775 | opp_overlap 807136 807138 807140, overlap 807138 AGCTGTTGTGAAAAA TATGGTTGGT TAC ACTAACCACA CTATTCTTGCAGAAG glgP 806219 - 808483 + | putative glycogen phosphorylase TERM 977 808566 - 808536 - T 79 -8.4 -4.06502 | opp_overlap 808536, overlap 808539 CATGCTTAAACTAAA TTATAAGACAGTAG TTT CTGCTGTCTTATGA TTTTACTTCAGACTT TERM 978 808536 - 808566 + T 100 -12.8 -4.41895 | opp_overlap 808536 808539 CATGCTTAAACTAAA TTATAAGACAGTAG TTT CTGCTGTCTTATGA TTTTACTTCAGACTT TERM 979 808563 - 808539 - T 76 -10.1 -3.0693 | opp_overlap 808536, overlap 808536 GCTTAAACTAAATTA TAAGACAGTAG TTT CTGCTGTCTTA TGATTTTACTTCAGA TERM 980 808712 - 808683 - T 100 -13.1 -5.07941 | opp_overlap 808683 AAAATGATATAAAAA GATTGATTTCGAT GTAC ACCGAAATCAATC TTTTTAGCAAAATAT TERM 981 808683 - 808712 + T 95 -10.9 -4.57837 | opp_overlap 808683 AAAATGATATAAAAA GATTGATTTCGAT GTAC ACCGAAATCAATC TTTTTAGCAAAATAT SpyM50806 809360 - 808740 - | putative lipoprotein TERM 982 809457 - 809419 - H 75 -10.5 -2.54013 | gap 1, opp_overlap 809414 809425, overlap 809418 809416 809409 ATAAACAAGATATAG CTATGATTCCCCATAACG CATG CGCTATGGGGAATT-TAG TACTATTTTGATTCT TERM 983 809425 - 809452 + H 95 -12.8 -3.88442 | opp_overlap 809419 809418 809416 809409, overlap 809414 AAGATATAGCTATGA TTCCCCATAACG CATG CGCTATGGGGAA TTTAGTACTATTTTG TERM 984 809628 - 809613 - H 95 -4.7 -5.98675 | opp_overlap 809613 GACAAAAAGAAAAAA CCTTG ATGTAA CAAGG TTTTAGTAAGTTATG TERM 985 810365 - 810375 + G 85 -6.8 -5.04733 | TTTTTAATCTTTGGC CCTG TAA CAGG TTTTATTTATAATTA SpyM50807 810101 - 810715 + | hypothetical protein TERM 986 810730 - 810769 + T 71 -7.4 -3.83205 | gap 1, opp_overlap 810738, overlap 810738 AGGTTTGGTGTTAAT TTGATAAACCG-CTTCTAT TTG ATGGAAGACGGTTTTTTAA TTTACTATGAACACT TERM 987 810738 - 810761 + T 91 -6.8 -5.40004 | gap 1, opp_overlap 810738, overlap 810730 TGTTAATTTGATAAA CCG-CTTCTAT TTG ATGGAAGACGG TTTTTTAATTTACTA TERM 988 810832 - 810793 - T 100 -13.3 -5.52909 | opp_overlap 810793 GAACACTGAAAAAAA CTTTCTTTTAAACTATA GTGTGT CATAGTTTAAAAGAAAG TCTTAACGCTTACTG TERM 989 810793 - 810832 + T 88 -12.6 -3.06737 | opp_overlap 810793 GAACACTGAAAAAAA CTTTCTTTTAAACTAT AGTGTGTC ATAGTTTAAAAGAAAG TCTTAACGCTTACTG SpyM50808 811627 - 810842 - | ABC transporter permease SpyM50809 812335 - 811637 - | ABC transporter ATP-binding protein TERM 990 811754 - 811744 - G 73 -5.4 -4.63218 | CTTGTTTCAAGAAAA TGAC TTC GTCA AGGATAGGTTCAATG SpyM50810 812706 - 812335 - | GntR family regulatory protein dnaE 812891 - 816001 + | DNA polymerase III DnaE pfk 816081 - 817094 + | 6-phosphofructokinase TERM 991 817517 - 817497 - g 75 -2.5 -5.26316 | overlap 817498 817499 TCACTGGAGAAAAAA TCCGTGTAG CGA CTACACAAG GTATTCAATCAACTC pyk 817157 - 818659 + | pyruvate kinase TERM 992 818684 - 818706 + F 100 -10.7 -5.21709 | opp_overlap 818684 AACTATTTACCTAAA GGTTAGAAG GCAAG CTTCTAACC TTTTTTGATATCAAA TERM 993 818706 - 818684 - f 86 -10.7 -3.67564 | opp_overlap 818684 AACTATTTACCTAAA GGTTAGAAG GCAAG CTTCTAACC TTTTTTGATATCAAA sipC 818877 - 819434 + | putative signal peptidase I TERM 994 819426 - 819451 + F 100 -9.1 -5.71983 | opp_overlap 819426 TTCGGATTTGTAGAA GTAGAGTAGTT GTCA GGCTACTCTAC TTTTTTTATAATTAG gcaA 819610 - 821424 + | D-fructose-6-phosphate amidotransferase TERM 995 821465 - 821443 - f 76 -10.6 -2.66979 | opp_overlap 821443, overlap 821442 ATTATAATGGATAAG GCAACCATCT GTT AGGTGGTTGC TTTTTGTTTTTAGGA TERM 996 821443 - 821465 + F 100 -12.8 -5.61881 | opp_overlap 821442 821443 ATTATAATGGATAAG GCAACCATCT GTT AGGTGGTTGC TTTTTGTTTTTAGGA SpyM50816 821620 - 821955 + | PhnA protein TERM 997 821966 - 821984 + F 81 -8.9 -4.03995 | opp_overlap 821965 821964 821969, overlap 821964 821969 TCTAATAATAATACG CAACCAG CTGAT CTGGTTG TATTTTTATAAAAAA SpyM50817 822062 - 822703 + | putative amino acid ABC transporter permease protein TERM 998 822768 - 822756 - g 72 -3.4 -5.00884 | opp_overlap 822745 822748 822756 AGTTTGGTCAAAAAA CCAT TTTTG ATGG CTTTAATCTAACCGT SpyM50818 822713 - 823342 + | putative amino acid ABC transporter ATP-binding protein TERM 999 823790 - 823764 - g 91 -6 -5.40072 | overlap 823766 823789 TTGTTGTCAAAAAAA GATCTGATATTA AAA CAATATCAGATA TGAAACATAAAGTGT TERM 1000 823788 - 823766 - g 85 -8.6 -4.34482 | overlap 823764 GTTGTCAAAAAAAGA TCTGATATTA AAA CAATATCAGA TATGAAACATAAAGT SpyM50819 823358 - 824194 + | putative amino acid ABC transporter,extracellular amino acid-binding protein TERM 1001 824198 - 824209 + F 100 -5.8 -6.23545 | opp_overlap 824198 ATTAAATCTTAAAAA GGAC ACTT GTCC TTTTTTTTGTTTAAC TERM 1002 824209 - 824198 - f 76 -5.8 -4.71482 | opp_overlap 824198 ATTAAATCTTAAAAA GGAC ACTT GTCC TTTTTTTTGTTTAAC TERM 1003 824270 - 824282 + F 77 -2.7 -5.46657 | opp_overlap 824259 824271, overlap 824259 824256 ACGATTTAATAAAAA TCTTA GTT TAAGG TTTTTTATTAAACTG cfa 824565 - 825338 + | cAMP factor TERM 1004 825583 - 825616 + T 100 -8.3 -5.54264 | opp_overlap 825583 GTATTCTTAAAAAAA TCCCTATGATCTGTT TAAA AACAAATTGTAGGGA TTTTTTTAACTATTT TERM 1005 825616 - 825583 - T 89 -6.1 -5.42259 | opp_overlap 825583 GTATTCTTAAAAAAA TCCCTATGATCTGTT TAAA AACAAATTGTAGGGA TTTTTTTAACTATTT SpyM50821 826943 - 825708 - | cation efflux family protein TERM 1006 827021 - 827001 - R 79 -3.2 -5.4505 | opp_overlap 826987, overlap 826987 827002 GGGCTTAAGAAAAAA GCCTAGCT TCTTG AACTTGGC AGAAGAAGACTAGGT SpyM50822 828385 - 827063 - | Na(+)-linked D-alanine glycine permease TERM 1007 828104 - 828093 - G 79 -3.6 -5.44119 | GCCATTCCAAAAAAA GCGG CAAC CCAC ATCCAAAAGAGCGCT pcrA 828914 - 831232 + | DNA helicase II TERM 1008 831241 - 831275 + F 100 -13.1 -5.59564 | opp_overlap 831241 AAAATAAGAAAAAAA TGAGCTTCCTACT ATATAAGTG AGTAGGAAGCTCA TTTTTTTAGATTTCT TERM 1009 831275 - 831241 - f 100 -13.1 -6.04419 | opp_overlap 831241 AAAATAAGAAAAAAA TGAGCTTCCTACT ATATAAGTG AGTAGGAAGCTCA TTTTTTTAGATTTCT SpyM50824 831595 - 831843 + | hypothetical protein SpyM50825 831880 - 832491 + | hypothetical protein SpyM50826 832502 - 832690 + | hypothetical protein SpyM50827 832703 - 833242 + | hypothetical protein SpyM50828 833283 - 833483 + | hypothetical protein SpyM50829 833491 - 833982 + | hypothetical protein TERM 1010 834025 - 834044 + F 100 -12.2 -4.8543 | AGTGGTGATAAGTTT GAGCTGGT ATTT ACCAGCTC TTTTTGTCACGGTTA SpyM50830 834145 - 834786 + | GntR family regulatory protein TERM 1011 834807 - 834787 - T 80 -9.8 -3.52111 | opp_overlap 834787 CGAAAAGGATTATAA GTTTGAGG GCCCA CCTCAAAC TTTTTTTGTTGCTGT TERM 1012 834787 - 834807 + T 100 -9.8 -5.85737 | opp_overlap 834787 CGAAAAGGATTATAA GTTTGAGG GCCCA CCTCAAAC TTTTTTTGTTGCTGT SpyM50831 835471 - 834929 - | TetR family regulatory protein SpyM50832 835577 - 836290 + | ABC transporter ATP-binding protein TERM 1013 836329 - 836318 - g 76 -4.4 -5.02323 | opp_overlap 836318 GTATGATAAAGAAAA CCTT ATGG AAGG ATATTTTGAGAGCTA TERM 1014 837709 - 837699 - g 73 -5.4 -4.62471 | CTTAATTGTCAAAAA GGAA TTA TTCC TCAATGCAGCTCAGT SpyM50833 836305 - 838941 + | ABC transporter permease protein SpyM50834 839033 - 839629 + | hypothetical protein TERM 1015 839674 - 839691 + G 73 -5.5 -4.4959 | CATTAAAAATGACCT TGGCTAC CATT GTTGCCA TTTTAATTGCTTACC TERM 1016 840006 - 840017 + G 73 -2.2 -5.24531 | CCTATTTTATCGAAT GAGT TTAT GCTC TTTTTTGTAGGGACT SpyM50835 839640 - 840596 + | hypothetical protein TERM 1017 840627 - 840649 + F 73 -3.4 -5.23316 | TTCTTATCTATGACA GCTTGGGA CTTAACT TCCTGAGC TTTTTTGCTATAATA SpyM50836 840693 - 842033 + | hypothetical protein TERM 1018 842195 - 842179 - g 80 -2.2 -5.54192 | opp_overlap 842183, overlap 842182 842183 842184 ATTAATTTAAAAAAA GAAGCC GGCAT GACCTC TCATGACGCAGTTTT truB 842149 - 843033 + | tRNA pseudouridine synthase B TERM 1019 843922 - 843908 - g 72 -4.3 -4.72846 | CGAGACATGGAAAAA TTCGA GGGAA TCGAA GATTTAACTGATAGA ribC 843062 - 843994 + | bifunctional riboflavin kinase/FMN adenylyltransferase spxA 844037 - 844441 + | transcriptional regulator Spx TERM 1020 844479 - 844510 + G 100 -12.4 -5.09225 | opp_overlap 844477 CCACTTGACTTAAGT TGGAGCACTGAAGA AATA TCCTCAGTGCTTCA TTTTTTGAATAAAGT SpyM50840 844443 - 844721 + | hypothetical protein SpyM50841 844711 - 845499 + | putative myo-inositol-1(or 4)-monophosphatase TERM 1021 845764 - 845785 + G 80 -10.1 -3.69618 | opp_overlap 845763, overlap 845762 TGGTGGCACAAGTAG CGGCTCCTC AAAA GGGGAGTCG TGTTTTAGACTTGGC SpyM50842 845502 - 846812 + | NOL1/NOP2/sun family protein TERM 1022 846868 - 846856 - f 100 -6.3 -5.96894 | ATTTAAAGAAAAAAA TGCTT TCA AAGCA TAGGTAGATATGTTA pstS 846952 - 847818 + | putative phosphate ABC transporter,extracellular phosphate-binding lipoprotein TERM 1023 848149 - 848159 + G 74 -4.6 -4.87665 | TACCCCATTTGCCAT TGGC GCA GCCG TTTTTATGACTGAAA pstC 847829 - 848764 + | putative phosphate ABC transporter permease protein SpyM50845 848754 - 849641 + | putative phosphate ABC transporter permease protein pstB2 849657 - 850460 + | phosphate import ATP-binding protein 2 pstB1 850473 - 851231 + | phosphate import ATP-binding protein 1 phoU 851299 - 851952 + | putative phosphate transport system protein TERM 1024 851988 - 851998 + F 76 -6.8 -4.386 | opp_overlap 851971 851969 851968, overlap 851969 CTGGGAAACAGCTTG CCAG TCC CTGG TTTTATACGAAATTG TERM 1025 852096 - 852115 + F 75 -9.4 -3.26546 | opp_overlap 852096 852098, overlap 852094 852088 ATATATGTAGACAGA GATGATAC TTAG GTATCATC TGTTGATCTATTATA TERM 1026 852115 - 852096 - f 74 -9.4 -3.0218 | opp_overlap 852094 852088 852096, overlap 852098 ATATATGTAGACAGA GATGATAC TTAG GTATCATC TGTTGATCTATTATA TERM 1027 853522 - 853542 + G 89 -5.5 -5.4505 | opp_overlap 853522 CTTGAAAACGATCAA TTGATTTTG AGT CAAAAACAA TTTTTTATTGGAAAA lap 852157 - 854694 + | putative lysyl-aminopeptidase TERM 1028 854708 - 854729 + F 84 -5.1 -5.31275 | AGACCATAAGCAAAA GAGTTGGGG GACT TTCCAGCTC TTTTTTGTAGTGAGC ciaR 855039 - 855713 + | response regulator protein ciaH 855706 - 857016 + | sensor histidine kinase TERM 1029 857014 - 857057 + T 71 -4.7 -4.70659 | gap 1, opp_overlap 857025 857054, overlap 857018 857019 857025 TTTGAAGTCAAACTA TAAGCTAAAAAGGGC-GACC AATAA GGTCAGCCCTTTTAAAGTTA TTTTTAACTGTCAAC TERM 1030 857018 - 857054 + T 70 -5.3 -4.46215 | gap 2, opp_overlap 857025, overlap 857014 857019 857025 AAGTCAAACTATAAG CT-AAAAAGGGC-GACC AATAA GGTCAGCCCTTTTAAAG TTATTTTTAACTGTC TERM 1031 857025 - 857046 + T 78 -8 -4.26634 | gap 1, opp_overlap 857025, overlap 857019 857018 857014 ACTATAAGCTAAAAA GGGC-GACC AATAA GGTCAGCCC TTTTAAAGTTATTTT TERM 1032 857046 - 857025 - T 88 -8 -4.78752 | gap 1, opp_overlap 857019 857018 857014 857025 ACTATAAGCTAAAAA GGGC-GACC AATAA GGTCAGCCC TTTTAAAGTTATTTT TERM 1033 857112 - 857123 + T 73 -5.8 -4.45151 | opp_overlap 857112 TATCGTATAAAAAAA CTCC AGCT GGAG TTTTCATTGGATATT TERM 1034 857123 - 857112 - T 91 -5.8 -5.626 | opp_overlap 857112 TATCGTATAAAAAAA CTCC AGCT GGAG TTTTCATTGGATATT TERM 1035 857157 - 857182 + T 82 -6.8 -4.97405 | overlap 857146 857154 TAGCCAAGTTTTGCA GCAAGGCGTG CTTTAT CGCGGCTTGC TTTGTTTTTGTGAAT rpsT 857374 - 857141 - | 30S ribosomal protein S20 coaA 858363 - 857443 - | pantothenate kinase TERM 1036 859130 - 859117 - g 84 -2.3 -5.81412 | overlap 859121 GTGATTCAAAAAAAA CAAGG AGCT CCTAG CGCTAAAGCAAAAAT SpyM50854 858631 - 859224 + | 16S rRNA m(2)G 1207 methyltransferase TERM 1037 859215 - 859263 + F 100 -15.7 -3.29471 | opp_overlap 859215, overlap 859220 ATTAAGAAGTATAAA GCAAGCCTAATTTAAATAATCAA CAA TTGCTCATTTAAATTAGGTTTGC TTAATATAGTAAAGA TERM 1038 859263 - 859215 - f 100 -15.7 -4.14859 | opp_overlap 859215 859220 ATTAAGAAGTATAAA GCAAGCCTAATTTAAATAATCAA CAA TTGCTCATTTAAATTAGGTTTGC TTAATATAGTAAAGA TERM 1039 859220 - 859258 + F 88 -10.6 -3.98683 | opp_overlap 859215, overlap 859215 GAAGTATAAAGCAAG CCTAATTTAAATAATCAA CAA TTGCTCATTTAAATTAGG TTTGCTTAATATAGT cdd 859878 - 860267 + | cytidine deaminase TERM 1040 861279 - 861267 - g 82 -4.1 -5.39721 | GTAGCAGATAAAAAA TTCCC TGG AGGAA AAACAACTGTCTATG SpyM50856 860361 - 861413 + | putative lipoprotein TERM 1041 861430 - 861451 + F 81 -7.2 -4.62336 | opp_overlap 861430, overlap 861432 GTTTAAGAACAAGAA GCGCGACC TTTGTC GGTCGCTC TTTTTAAACTGAGAT TERM 1042 861451 - 861430 - f 73 -7.2 -4.09963 | opp_overlap 861430 861432 GTTTAAGAACAAGAA GCGCGACC TTTGTC GGTCGCTC TTTTTAAACTGAGAT TERM 1043 861432 - 861449 + F 77 -8.4 -3.92746 | opp_overlap 861430, overlap 861430 TTAAGAACAAGAAGC GCGACC TTTGTC GGTCGC TCTTTTTAAACTGAG TERM 1044 861480 - 861460 - f 84 -11.3 -3.53012 | opp_overlap 861456 861455, overlap 861469 861470 GTCGCTCTTTTTAAA CTGAGATAA TTT TTATCTCAG TAAAGTTTGTGATAT SpyM50857 861552 - 863084 + | ABC transporter ATP-binding protein TERM 1045 863245 - 863260 + G 71 -6.2 -4.2679 | GGAGAAATATTCCGT TCAATG GGGC CATTGA TTTTAATAGCGCTTG SpyM50858 863077 - 864141 + | ABC transporter permease protein TERM 1046 864561 - 864587 + G 70 -3.1 -4.87803 | overlap 864563 TTGATTTCCCAGGTT TATCACAAATT CCTGT GATTGGTGATA TTTTCTTTAAAAATA SpyM50859 864143 - 865099 + | ABC transporter permease protein TERM 1047 865138 - 865179 + T 100 -8.8 -5.055 | opp_overlap 865138 TAGTGAGGTTTAACA GCACTCCTAAAGCAAGAT AGTTAG GTCTAGCTTTAAGGGTGC TTTTTTGGGACTTAC TERM 1048 865251 - 865273 + T 100 -11.4 -5.00412 | opp_overlap 865251 AGAATAGACTAAAAA GAACTAAGTC AGC GGCTTAGTTC TTTTTGCTTGTCTTT TERM 1049 865273 - 865251 - T 100 -9.2 -4.88711 | opp_overlap 865251 AGAATAGACTAAAAA GAACTAAGTC AGC GGCTTAGTTC TTTTTGCTTGTCTTT pgmA 867035 - 865317 - | putative phosphomannomutase TERM 1050 865829 - 865856 + g 70 -2.7 -5.07486 | opp_overlap 865815 ATCCGAAGCTTTCTT CAAAACCAAAC ATATAG GTGTGGTTATG TTTTTCTTCAAACTC TERM 1051 867113 - 867123 + r 78 -4 -5.38348 | TAATTATTTGCAGCT GTTT ACA AAAC TTTTTTCATATTTTT TERM 1052 867197 - 867165 - R 90 -8.7 -4.42851 | opp_overlap 867165 867168, overlap 867158 GTAAGAAAGTTAAAA TAACCAAGTTTTT AAAAGAG AAAAACTCGGTTA TTGTGAAAGCTAATT SpyM50861 867780 - 867211 - | hypothetical protein TERM 1053 867365 - 867355 - G 78 -4 -5.20328 | CGCGAAAAAAATAAA TATC CCA GATA ATACAAATATAGTAT coaC 868383 - 867838 - | phosphopantothenoylcysteine decarboxylase dpfB 869068 - 868376 - | phosphopantothenate--cysteine ligase TERM 1054 868684 - 868666 - G 82 -3.8 -5.40072 | overlap 868669 868670 TTTTTTTCAAAAAAA GAACCTGA TAA TCAGATGC AGATGAGATTTTCGG TERM 1055 869111 - 869129 + H 83 -8.8 -4.2586 | opp_overlap 869098 869108 869111, overlap 869103 AACGGAAGATAATGA CGCCAGAC ATT GTCTTGCG TTTGTATTAATATGG TERM 1056 869129 - 869111 - H 70 -8.8 -2.95409 | opp_overlap 869103 869111, overlap 869098 869108 AACGGAAGATAATGA CGCCAGAC ATT GTCTTGCG TTTGTATTAATATGG SpyM50864 869249 - 870100 + | hypothetical protein SpyM50865 870097 - 871296 + | NADH:flavin oxidoreductase / NADH oxidase family protein SpyM50866 871293 - 872291 + | luciferase-like monooxygenase SpyM50867 872333 - 872665 + | putative glycine cleavage H-protein TERM 1057 872774 - 872800 + G 71 -7.3 -3.89215 | gap 1, opp_overlap 872759, overlap 872776 GCGACAAGACTTGTG GC-GGGCGCT CATTAACC AGCGCCCTGC TTTGCCTTTATCAAA SpyM50868 872658 - 873470 + | hypothetical protein TERM 1058 873841 - 873859 + G 72 -4.6 -4.66833 | overlap 873842 GCTTTTTGGGTGGCT GGTTATGA TCC TCATAACA TTTTTCACATTCAAG SpyM50869 873463 - 874344 + | SIR2 family protein lplA 874391 - 875410 + | putative lipoate-protein ligase A fhs1 875539 - 877209 + | formate--tetrahydrofolate ligase TERM 1059 877236 - 877216 - f 100 -12.7 -4.72272 | opp_overlap 877209 877231 CTCTTTTAGGAAAAA TTGCTCGAA TAA TTCGAGCAA GCGCTCCTTTCTTCC SpyM50872 877294 - 878871 + | putative cardiolipin synthetase TERM 1060 878916 - 878931 + F 76 -7.6 -4.07568 | TGCGATGAGTCGATT GTGACT GCAA AGTCAC TTTTGCGCAGGGGAG TERM 1061 879025 - 879045 + F 100 -12.7 -5.81622 | TTAAGAATGCCCCTT GGATTGAGA TAT TCTCAATCC TTTTTTTAATTTTAT SpyM50873 879193 - 879549 + | ATP-binding protein TERM 1062 879598 - 879625 + T 100 -14.4 -5.56568 | opp_overlap 879598 GGGATAAGGTTTAAA TACCTAACAGAT AAAA ATCTGTTAGGTA TTTTTTTGCTACTAT TERM 1063 879625 - 879598 - T 100 -14.4 -3.62591 | opp_overlap 879598 GGGATAAGGTTTAAA TACCTAACAGAT AAAA ATCTGTTAGGTA TTTTTTTGCTACTAT SpyM50874 881288 - 880020 - | GntR family regulatory protein TERM 1064 880403 - 880387 - G 71 -3.7 -5.00616 | overlap 880390 TTTTGGGTTAAAAAA TGAGGTT TTA AACCTGA CGGTAAAACTAGAGC TERM 1065 880922 - 880910 - G 73 -7.7 -3.93288 | opp_overlap 880909 TTTCAGCTAAGTAAA GAAGC AAA GCTTC CCTTAGTTCTTCTAG SpyM50875 881378 - 882244 + | pyridoxamine kinase SpyM50876 882222 - 882779 + | hypothetical protein TERM 1066 882884 - 882871 - f 79 -8.1 -4.17537 | opp_overlap 882871 TGAAATAACTATAAA GCCGT TTTG ACGGC TTTTTTGATGACAGT TERM 1067 882871 - 882884 + F 100 -8.1 -5.14965 | opp_overlap 882871 TGAAATAACTATAAA GCCGT TTTG ACGGC TTTTTTGATGACAGT TERM 1068 883527 - 883541 + G 72 -4.3 -4.76274 | opp_overlap 883517 AAAACGCTATTTACA GCATT ATGAA AATGC TTTTGTGTTGATTTC SpyM50877 882892 - 884457 + | ABC transporter ATP-binding protein TERM 1069 884605 - 884576 - f 75 -10.3 -2.53641 | opp_overlap 884576 884584, overlap 884575 884584 TAACTGATCACCAAC CAAAAAAAGATGT GACT ACATCTTTTTTTA TCTAATGGAATGGTG TERM 1070 884584 - 884597 + F 88 -5.3 -5.74122 | opp_overlap 884576 884575 884584, overlap 884576 CACCAACCAAAAAAA GATGT GACT ACATC TTTTTTTATCTAATG TERM 1071 884597 - 884584 - f 88 -5.3 -5.65513 | opp_overlap 884584 884576, overlap 884576 884575 CACCAACCAAAAAAA GATGT GACT ACATC TTTTTTTATCTAATG murM 884659 - 885876 + | putative peptidoglycan branched peptide synthesis protein MurM TERM 1072 885862 - 885917 + T 95 -13 -3.68222 | gap 1, opp_overlap 885864 885867 885871, overlap 885864 885867 885879 ATACGAAAACAGTTA AAGAATAAACATTAAAAGACTCG-GCA AAA TGAGCGAGTCTTTTAATGTTCATTCTG TTATTCCCATTCAAC TERM 1073 885864 - 885915 + T 100 -15.6 -3.42069 | gap 1, opp_overlap 885864 885867 885871, overlap 885862 885867 885879 ACGAAAACAGTTAAA GAATAAACATTAAAAGACTCG-GCA AAA TGAGCGAGTCTTTTAATGTTCATTC TGTTATTCCCATTCA TERM 1074 885915 - 885864 - T 100 -17.8 -3.85786 | gap 1, opp_overlap 885862 885864 885867 885879, overlap 885867 885871 ACGAAAACAGTTAAA GAATAAACATTAAAAGACTCG-GCA AAA TGAGCGAGTCTTTTAATGTTCATTC TGTTATTCCCATTCA TERM 1075 885912 - 885867 - T 100 -13.7 -4.03611 | gap 1, opp_overlap 885867 885864 885862 885879, overlap 885864 885871 AAAACAGTTAAAGAA TAAACATTAAAAGACTCG-GCA AAA TGAGCGAGTCTTTTAATGTTCA TTCTGTTATTCCCAT TERM 1076 885867 - 885912 + T 91 -11.5 -3.8372 | gap 1, opp_overlap 885864 885867 885871, overlap 885864 885862 885879 AAAACAGTTAAAGAA TAAACATTAAAAGACTCG-GCA AAA TGAGCGAGTCTTTTAATGTTCA TTCTGTTATTCCCAT TERM 1077 885908 - 885871 - T 100 -12.3 -4.58585 | gap 1, opp_overlap 885867 885864 885862 885879, overlap 885867 885864 CAGTTAAAGAATAAA CATTAAAAGACTCG-GCA AAA TGAGCGAGTCTTTTAATG TTCATTCTGTTATTC guaA 887480 - 885918 - | bifunctional GMP synthase/glutamine amidotransferase protein TERM 1078 888261 - 888275 + G 70 -8.6 -3.28712 | opp_overlap 888268, overlap 888256 AAACAATCGTCTTTT GCGAAA AGC TTTCGC TTATGCAAAGCAGCA TERM 1079 888668 - 888657 - g 72 -4.4 -4.83169 | ATTGTTTGAGAAAAA CCAA TTTA TTGG CTATGCGCCAGAATT SpyM50880 887647 - 889080 + | hypothetical protein SpyM50881 889136 - 889861 + | GntR family regulatory protein TERM 1080 889865 - 889884 + F 76 -5 -5.00616 | opp_overlap 889866 889869, overlap 889866 GAAAATAATTAGTAA AGAAGTCA TTTA TGACTTCC TTTTTTACACGAACA TERM 1081 889883 - 889866 - f 77 -8.5 -3.91642 | opp_overlap 889866 889865, overlap 889869 AAAATAATTAGTAAA GAAGTCA TTTA TGACTTC CTTTTTTACACGAAC TERM 1082 889866 - 889883 + F 72 -8.5 -3.60048 | opp_overlap 889866 889869, overlap 889865 AAAATAATTAGTAAA GAAGTCA TTTA TGACTTC CTTTTTTACACGAAC SpyM50882 889950 - 890291 + | hypothetical protein ffh 890306 - 891868 + | signal recognition particle protein TERM 1083 891895 - 891866 - T 100 -10.9 -4.9251 | opp_overlap 891871, overlap 891871 AAGAAAAAACGAAAA TAAAAGAGACGAA AATT TTCGTCTCTTTTT GATGTGAAATTCATT TERM 1084 891871 - 891890 + T 100 -10.8 -4.80882 | opp_overlap 891866 891871 AAAACGAAAATAAAA GAGACGAA AATT TTCGTCTC TTTTTGATGTGAAAT TERM 1085 891890 - 891871 - T 100 -10.8 -5.24291 | opp_overlap 891871, overlap 891866 AAAACGAAAATAAAA GAGACGAA AATT TTCGTCTC TTTTTGATGTGAAAT SpyM50884 892683 - 891985 - | putative phage repressor-like protein TERM 1086 892696 - 892719 + H 74 -9.8 -2.62263 | overlap 892694 CATTTGGTAGCTCCT TTAGTAAAGT TATA ACTTTACTAA TAGTATCAAAAAAAT TERM 1087 893611 - 893598 - g 100 -3.1 -6.07374 | overlap 893602 ACAAAAAAGAAAAAA GAAAC CCTG GCTTC CAGAGCGGAAAATAT TERM 1088 893616 - 893602 - g 91 -7.8 -5.29208 | overlap 893598 AAAAGAAAAAAGAAA CCCTGG CTT CCAGAG CGGAAAATATTAAGC TERM 1089 893712 - 893752 + G 76 -9.2 -3.67344 | gap 1, overlap 893711 AAATTGTCTAATCGT GCCAAATCTTCTTTCCGTA AAAA TAAGGAGAGG-GATTTGGC TATTATTTCTCTACT xerS 893157 - 894227 + | site-specific tyrosine recombinase XerS TERM 1090 894260 - 894221 - f 100 -16.9 -3.49668 | opp_overlap 894215 AAATGCTTTAGATAA CCTTTAATGTTACATAA TTTTTT TTATGTAACATTAAAGG TAAAAATAGCTTCAA SpyM50886 894635 - 895117 + | hypothetical protein citC 895206 - 896258 + | putative citrate [pro-3S]-lyase] ligase TERM 1091 896294 - 896268 - T 100 -12.5 -5.49569 | opp_overlap 896268 TACTAAGATAAAAAA CCTATCTGATT ATCAA AATCAGATAGG TTTTTGGTATTGTTC TERM 1092 896268 - 896294 + T 100 -12.5 -4.93316 | opp_overlap 896268 TACTAAGATAAAAAA CCTATCTGATT ATCAA AATCAGATAGG TTTTTGGTATTGTTC SpyM50888 897777 - 896368 - | oxaloacetate decarboxylase TERM 1093 897740 - 897752 + g 80 -7.7 -4.33105 | overlap 897728 TCACGTAAAACTGTT TCCGT TAT ACGGA TTTTCGTCATAATTG citX 898355 - 897777 - | 2'-(5''-triphosphoribosyl)-3'-dephospho-CoA:apo-citrate lyase citF 899880 - 898348 - | putative citrate lyase alpha subunit citE 900770 - 899883 - | putative citrate lyase beta subunit TERM 1094 899955 - 899968 + g 74 -5.3 -4.81249 | TGCACGTTCAACGAT TGGTT TATC AACCA TTTTTCCATTTAAGG TERM 1095 900037 - 900049 + g 78 -4.1 -5.33131 | GCCCAGATGACTTGT TTGGC ATG GTCAA TTTCTTTTTTTGTTG citD 901066 - 900758 - | citrate lyase subunit gamma SpyM50893 901236 - 901102 - | hypothetical protein SpyM50894 902375 - 901254 - | putative Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit TERM 1096 902224 - 902210 - G 77 -7.8 -4.1899 | overlap 902211 CCACTTGACTTAAAA CCCCTG AGC CAGGGA AATTCACAAGGATTG TERM 1097 902223 - 902211 - G 70 -9.1 -3.11073 | overlap 902210 CACTTGACTTAAAAC CCCTG AGC CAGGG AAATTCACAAGGATT SpyM50895 902815 - 902420 - | acetyl-CoA carboxylase biotin carboxyl carrier protein subunit SpyM50896 903195 - 902872 - | hypothetical protein SpyM50897 903361 - 904767 + | putative Mg2+/citrate complex transporter TERM 1098 904807 - 904840 + F 73 -5.4 -4.58663 | opp_overlap 904807 TTCCTTATGAGATGA TTAAAGTCATGTCC TTTTGT GAGCATGGCTTTAA TTTTTCAGAACTCAT TERM 1099 904972 - 904957 - g 82 -6.2 -4.87133 | AGCCGTTAAACAAAA TCTTGA CCTA TCAAGA AATATCCCTTTGAAA SpyM50898 904925 - 905620 + | GntR family regulatory protein citG 905613 - 906497 + | putative 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase TERM 1100 906653 - 906631 - T 83 -6.3 -5.14563 | CTTTCTACTAAAAAA GGAGCTAGA TTGCT TCCAACTCC TGATAATGATTTATT SpyM50900 907828 - 906698 - | putative glutaconyl-CoA decarboxylase beta subunit SpyM50901 908188 - 907838 - | putative glutaconyl-CoA decarboxylase gamma subunit TERM 1101 908040 - 908070 + g 100 -14.1 -4.57482 | ATTGGAGCCTTTACC TGAATGCCACCGC CAGCA GCGTTGGCATTCA TTTCTTTCTCAGTAG SpyM50902 908502 - 908188 - | hypothetical protein SpyM50903 909951 - 908545 - | oxaloacetate decarboxylase TERM 1102 910090 - 910061 - R 78 -3.6 -5.30155 | opp_overlap 910062, overlap 910062 TCAGCAAGTAAAAAA GTCCTCTTCAGC AACTCA ACTGAAAAGGAA CTCTTTTTTTAGTGT SpyM50904 911451 - 910105 - | tRNA (uracil-5-)-methyltransferase Gid TERM 1103 910828 - 910845 + g 79 -8.5 -4.13206 | TGCGGTTGTCAGAGC TTCATGG AAAG CCATGAA TTCTTCTTTGGTCAT TERM 1104 910988 - 911000 + g 75 -2.7 -5.24129 | AATCCATCGCCACCA TTTAC CGC GTGAA TTTTTTCTGCCAGGG TERM 1105 911580 - 911551 - R 100 -12.3 -5.1361 | opp_overlap 911557, overlap 911552 AGAAAGGGGAAAAAA GCAAAAGAGGCTA TGTG TAGCCTCTTTTGT AATCCTCATTTAATT TERM 1106 911579 - 911552 - R 100 -15.8 -3.6654 | opp_overlap 911557, overlap 911551 GAAAGGGGAAAAAAG CAAAAGAGGCTA TGTG TAGCCTCTTTTG TAATCCTCATTTAAT TERM 1107 911557 - 911574 + r 91 -9.9 -4.49311 | opp_overlap 911552 911551 GGGAAAAAAGCAAAA GAGGCTA TGTG TAGCCTC TTTTGTAATCCTCAT topA 913715 - 911586 - | DNA topoisomerase I TERM 1108 912915 - 912941 + g 76 -11 -2.64454 | overlap 912914 912911 ATTACGACGTCGCTC TTTCTTGTCAAC CTT GCTGACAAGAAA ATCTTCATTTGTTAG TERM 1109 913426 - 913439 + g 76 -2.3 -5.41746 | overlap 913437 AAATAAACTTTTTTA GCAGC TTTG GCTTC TTTTTTTAAAGAATT SpyM50906 914657 - 913821 - | SMF family protein TERM 1110 914717 - 914701 - R 100 -5.9 -6.28401 | opp_overlap 914701 TAAAAAAGAAAAAAA TTCTGCT AAA AACAGAA CTTTTTAAGGATTAG rnhB 915513 - 914722 - | ribonuclease HII TERM 1111 915054 - 915066 + g 75 -7.7 -4.01419 | ACTGTTTAATGGCTT CTAGC ATA GCTAG TTTGGTTGCTTCATA rbgA 916351 - 915503 - | ribosomal biogenesis GTPase SpyM50909 916570 - 917010 + | hypothetical protein TERM 1112 917079 - 917063 - g 77 -8.7 -3.85704 | overlap 917065 TGAGGAAGTAGCAAA CAGCGTG ACA CACGCTA TCGGAGCATTTGCTA TERM 1113 917077 - 917065 - g 74 -9.1 -3.51124 | overlap 917063 AGGAAGTAGCAAACA GCGTG ACA CACGC TATCGGAGCATTTGC SpyM50910 917007 - 917657 + | hypothetical protein TERM 1114 918684 - 918709 + T 73 -9.1 -3.41292 | opp_overlap 918690, overlap 918690 TTCCAACAGAAGATT AAAAAAGTGCC TAAT GGCACTTTTTG TCTTATCTTAAAGGT TERM 1115 918703 - 918690 - T 100 -8.1 -5.30189 | opp_overlap 918690 918684 CAGAAGATTAAAAAA GTGCC TAAT GGCAC TTTTTGTCTTATCTT TERM 1116 918690 - 918703 + T 100 -8.1 -5.18995 | opp_overlap 918690, overlap 918684 CAGAAGATTAAAAAA GTGCC TAAT GGCAC TTTTTGTCTTATCTT SpyM50913 919175 - 918735 - | hypothetical protein TERM 1117 919201 - 919220 + r 78 -3.6 -5.41746 | CTTTCTTTTAGACGG TGTTTTAC TATC GTTAAACA TTTTTTTAGCAAGTT TERM 1118 919510 - 919491 - R 76 -6.6 -4.48175 | AAAATTGAAGTAAAA TTATCTAT CGCA ATAGATAA AAAAACATTAATACG SpyM50914 920202 - 919789 - | glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein srtA 921034 - 920285 - | sortase A TERM 1119 920493 - 920511 + g 85 -2.5 -5.76237 | opp_overlap 920488, overlap 920488 920482 ACCGTGAAAACATCT TTTATGA TGTAT TCGTAAA TTTTTTCTTTATCTG cafB 923540 - 921054 - | DNA gyrase subunit A TERM 1120 921293 - 921328 + g 76 -3.4 -5.24551 | gap 1 CTACGGTAACCAATC CAGCTAAT-TGACCATT TTT AGGGGTAATATTAGCTG TTTTTATTCCTTTCC TERM 1121 924645 - 924632 - g 72 -3.1 -5.09426 | CTGAATTGCAAAAAA TGCAA GCCT CTGCA AATCAATTAAAAGCT ldh 923731 - 924714 + | L-lactate dehydrogenase TERM 1122 924716 - 924742 + T 78 -7.5 -4.23723 | gap 1, opp_overlap 924716 924718 924723, overlap 924723 CTGCTAAAAACTAAT CACAAAAGAGAC TTCG GTCTCTTTT-TG TTTTGCCTGATATTC TERM 1123 924723 - 924736 + T 93 -6.7 -5.48213 | opp_overlap 924723 924718 924716, overlap 924716 AAACTAATCACAAAA GAGAC TTCG GTCTC TTTTTGTTTTGCCTG TERM 1124 924736 - 924723 - T 78 -6.7 -4.59117 | opp_overlap 924716 924723, overlap 924718 924716 AAACTAATCACAAAA GAGAC TTCG GTCTC TTTTTGTTTTGCCTG TERM 1125 924856 - 924832 - T 100 -7.7 -5.54079 | opp_overlap 924832 TTAAAAAGCAAAAAA GCCAGTGCTGC TGA ACTGCTCTGGC TTTTTCCTATCAGAT TERM 1126 924832 - 924856 + T 83 -7 -4.80882 | opp_overlap 924832 TTAAAAAGCAAAAAA GCCAGTGCTG CTGAA CTGCTCTGGC TTTTTCCTATCAGAT nox 926243 - 924873 - | NADH oxidase TERM 1127 926481 - 926458 - R 100 -9 -5.28683 | opp_overlap 926458 926448 AGGAAGATTAAAAAA GTTCATCTTT GTTA AAAGACGAAC TTTATTCTATCTTTT TERM 1128 926458 - 926481 + r 76 -6.8 -4.5002 | opp_overlap 926458, overlap 926448 AGGAAGATTAAAAAA GTTCATCTTT GTTA AAAGACGAAC TTTATTCTATCTTTT SpyM50919 928210 - 926483 - | ABC transporter ATP-binding membrane protein TERM 1129 927037 - 927017 - G 84 -12.7 -3.08173 | opp_overlap 927017, overlap 927007 AGGAACTTTATCTAA CTTGATGCT ACC AGCATCAAG TTCATAAAAGCGCAT TERM 1130 927017 - 927037 + g 85 -12.7 -3.14211 | opp_overlap 927007 927017 AGGAACTTTATCTAA CTTGATGCT ACC AGCATCAAG TTCATAAAAGCGCAT TERM 1131 928188 - 928167 - G 76 -7.3 -4.15044 | opp_overlap 928159 GGTTTTTTTAACAAA TCCTGAAGC ACTC GCTTTAGGA GGTGATGATCTGTTT SpyM50920 929931 - 928213 - | ABC transporter ATP-binding membrane protein TERM 1132 929623 - 929609 - G 72 -8.6 -3.46965 | opp_overlap 929606 929603 AACAGACTAGCATAA CCAAGA TGG TCTTGG TCCTCCTTGCTCAAA SpyM50921 930540 - 929941 - | hypothetical protein SpyM50922 931518 - 930541 - | hypothetical protein glyA 932781 - 931525 - | serine hydroxymethyltransferase TERM 1133 931901 - 931884 - G 79 -6.9 -4.57073 | opp_overlap 931884 931882 CATCTTGTGCAAAAA CTGCTGC CATA GCCGCAG TATTATCAATAATAG SpyM50924 933223 - 932771 - | acetyltransferase (GNAT) family protein SpyM50925 933831 - 933241 - | hypothetical protein SpyM50926 934654 - 933815 - | putative methyltransferase prfA 935733 - 934654 - | peptide chain release factor 1 TERM 1134 935366 - 935352 - G 75 -5.6 -4.78107 | GATCACCAGCAAAAA GCGCTG CTT CATCGC CACCAGCAGCACCAC tdk 936337 - 935768 - | thymidine kinase SpyM50929 936475 - 936660 + | 4-oxalocrotonate tautomerase TERM 1135 936666 - 936689 + F 82 -11 -3.40403 | opp_overlap 936664 936662, overlap 936668 AAAATCATAATGACC TTCCCCCACT CCTT AGTGGGGGTA TTCTGCTAAAAAGAG TERM 1136 936668 - 936687 + F 100 -13.6 -3.27475 | opp_overlap 936664 936662, overlap 936666 AATCATAATGACCTT CCCCCACT CCTT AGTGGGGG TATTCTGCTAAAAAG TERM 1137 937286 - 937258 - g 72 -9.7 -3.07816 | overlap 937279 CGTTCATGGACCTAA TCCGAAAAGCCCT GAC AAGACTTTTCGAA TTGGCATTCAAAAAC SpyM50930 936713 - 937651 + | ApbE family protein TERM 1138 937692 - 937706 + T 95 -7.1 -5.37865 | opp_overlap 937692 937685, overlap 937685 TGATCACAGAAAAAA CGGCT CAATT AGCCG TTTTTTAATTATTCA TERM 1139 937706 - 937692 - T 95 -7.1 -5.39721 | opp_overlap 937685 937692, overlap 937685 TGATCACAGAAAAAA CGGCT CAATT AGCCG TTTTTTAATTATTCA pbuX 938998 - 937715 - | putative xanthine permease TERM 1140 938298 - 938269 - G 71 -6.5 -4.13872 | ATTCAATCATAGAAA CCGTTGCGATGAT ACAC ATCATCACAATAG AAGTGATTTCAAAAG xpt 939579 - 938998 - | xanthine phosphoribosyltransferase SpyM50933 940868 - 939885 - | guanosine 5'-monophosphate oxidoreductase TERM 1141 941138 - 941118 - R 89 -6.1 -5.27399 | TAAGAGACGAAAAAA TGCCAGTCC TAC GGACCAACA TTTCTGTTTATTTCT SpyM50934 942672 - 941146 - | ABC-type glycine betaine transport system protein SpyM50935 943393 - 942665 - | ABC-type glycine betaine transport system ATP-binding protein TERM 1142 944467 - 944441 - g 78 -7.3 -4.33819 | gap 1, opp_overlap 944457 944462, overlap 944424 944442 944443 AGTATTTAGAAGAAA CTGGACAAGCCA TTGT TGGCTGGTCC-G ATGTCACATCAGGCC TERM 1143 944466 - 944443 - g 76 -11 -2.51259 | opp_overlap 944457 944462, overlap 944424 944441 944442 TATTTAGAAGAAACT GGACAAGCCA TTGT TGGCTGGTCC GATGTCACATCAGGC SpyM50936 943813 - 944502 + | Na+ driven multidrug efflux pump SpyM50937 945451 - 944696 - | putative NADP-dependent L-serine/L-allo-threonine dehydrogenase TERM 1144 945497 - 945477 - R 100 -6.8 -6.07627 | opp_overlap 945477 ACCTTCAAAAAAAAA CGAGATGG TCTGG CCAACTCG TTTTTAATAATGTCA TERM 1145 945477 - 945497 + r 88 -7.5 -4.79223 | opp_overlap 945477 ACCTTCAAAAAAAAA CGAGATGGT CTG GCCAACTCG TTTTTAATAATGTCA eutD 946574 - 945579 - | phosphotransacetylase SpyM50939 947483 - 946578 - | putative RNA pseudouridylate synthase ppnK 948307 - 947480 - | inorganic polyphosphate/ATP-NAD kinase SpyM50941 948962 - 948291 - | hypothetical protein TERM 1146 949296 - 949245 - g 73 -6.6 -4.21768 | opp_overlap 949283 GAATTAACCCTAAAA GTGCCAGAAAAAGTGGGGAATCGT GAGT ACAATGTCCCTCTTTTTCTTGAAC AAGCAAAAGATATGA SpyM50942 949050 - 949628 + | adenylate cyclase family protein TERM 1147 949671 - 949642 - f 78 -10.9 -2.75349 | opp_overlap 949642 949644, overlap 949639 949638 AATGGCTAAAAGCGA CAGAAAAACTGAA ATTT TTCTGTTTTTCTG TTAAAATAGGGATGT TERM 1148 949642 - 949663 + F 83 -6 -5.09762 | opp_overlap 949642 949639 949638, overlap 949644 AATGGCTAAAAGCGA CAGAAAAA CTGAAA TTTTTCTG TTTTTCTGTTAAAAT prs2 949768 - 950748 + | ribose-phosphate pyrophosphokinase TERM 1149 951206 - 951196 - g 71 -6.8 -4.0802 | opp_overlap 951196, overlap 951192 ATGCCAATAACGAAA CAGG TGA CCTG TTACCTATTAAGGAC SpyM50944 950745 - 951872 + | putative cysteine desulfurase SpyM50945 951862 - 952209 + | hypothetical protein TERM 1150 952339 - 952356 + F 90 -7.1 -5.1101 | ATACTATTATATAGT GCTAAAA CTAA TTTTAGC TTTTTTAACTCATAC rex 952461 - 953105 + | redox-sensing transcriptional repressor Rex SpyM50947 953115 - 953810 + | putative peptidase radC 954492 - 953812 - | DNA repair protein RadC TERM 1151 954552 - 954531 - R 93 -6.7 -5.626 | gap 1, opp_overlap 954531 TATTCGACAAAAAAA CAAG-TTCCT TTT AGGAAACTTG TTTTTTTTGAATAGC TERM 1152 954531 - 954552 + r 93 -6.7 -5.81412 | gap 1, opp_overlap 954531 TATTCGACAAAAAAA CAAG-TTCCT TTT AGGAAACTTG TTTTTTTTGAATAGC SpyM50949 955689 - 954541 - | hypothetical protein SpyM50950 955802 - 955689 - | hypothetical protein SpyM50951 956462 - 955848 - | GDSL-like lipase/acylhydrolase family protein SpyM50952 958157 - 956625 - | voltage gated chloride channel family protein TERM 1153 957166 - 957155 - G 89 -4.4 -5.54264 | overlap 957145 AAATAGGTAAAAAAA TACC TCCA GGTA AGCCACTTCCATAAC TERM 1154 957557 - 957547 - G 74 -4 -5.05113 | overlap 957548 TTCAGAGAAATAAAA TTAG CCA CTAA GCTAGCCACTAGCGC TERM 1155 958287 - 958260 - R 83 -6.2 -5.15969 | opp_overlap 958259 CTGTAACCCAAAAAA CCCACTGGGCTA TTGG TTACTCAGTGGG GTGATGAAAGAAATT aphA 959066 - 958335 - | acid phosphatase/phosphotransferase TERM 1156 958787 - 958770 - G 76 -7.1 -4.15106 | opp_overlap 958765 GACTAAGTCCCAAAA TTTTTGC TTAT GCAAAAA ATCAAATGAGCCTGG TERM 1157 959417 - 959405 - g 71 -4.8 -4.58395 | opp_overlap 959396 TCCAGTTGGTAAAAA CCAC TATTT GTGG AACTGATTTGCATAT SpyM50954 959302 - 960351 + | putative zinc-binding alcohol dehydrogenase TERM 1158 960398 - 960352 - T 100 -19.3 -3.12378 | gap 1, opp_overlap 960352 960360, overlap 960360 AATGATATTAGCTAA TCACAAAATAAGTAGAAGC-TA GAAA TATGCTTCTACTTATTTTGTGA TTTAAAGTATAACTT TERM 1159 960352 - 960398 + T 100 -19.3 -3.64371 | gap 1, opp_overlap 960352 960360, overlap 960360 AATGATATTAGCTAA TCACAAAATAAGTAGAAGC-TA GAAA TATGCTTCTACTTATTTTGTGA TTTAAAGTATAACTT TERM 1160 960390 - 960360 - T 91 -9.3 -4.55491 | gap 1, opp_overlap 960352 960360, overlap 960352 TAGCTAATCACAAAA TAAGTAGAAGC-TA GAAA TATGCTTCTACTTA TTTTGTGATTTAAAG TERM 1161 960360 - 960390 + T 91 -9.3 -4.61566 | gap 1, opp_overlap 960360 960352, overlap 960352 TAGCTAATCACAAAA TAAGTAGAAGC-TA GAAA TATGCTTCTACTTA TTTTGTGATTTAAAG SpyM50955 961598 - 960432 - | NAD-dependent malic enzyme malP 962960 - 961629 - | sodium-dependent malate transporter TERM 1162 961899 - 961911 + g 70 -7.7 -3.6422 | opp_overlap 961898 961910, overlap 961898 ATATTGCAAGCTAAG GGTTG CCA CAACC TCTTTTAAGGGGATA TERM 1163 963673 - 963683 + G 89 -6.8 -5.26247 | CTTCTTATTAGTTTA CTGG TCA CCAG TTTTATTTCTTTTCG TERM 1164 963886 - 963862 - g 79 -10 -3.54459 | TTAATCGCTCGGAAA TGCCAGTTGG GAAAA CCTACTGGCA ACAGTTTCAATCACC TERM 1165 964608 - 964592 - g 71 -7.3 -3.95022 | opp_overlap 964592 TCCATCAACATCAAA CCGTAAC CGA GTTACAG TTCTCAGTGACAACA SpyM50957 963121 - 964662 + | putative sensor kinase SpyM50958 964643 - 965308 + | response regulator protein TERM 1166 965358 - 965326 - T 73 -9.3 -2.87564 | opp_overlap 965333 965349, overlap 965333 965349 TCATCTGTCGATACA TTAAAAAGGCTGG AGAAATA CCAGCCTTTTTGA GGGCTTATTTGCGAT TERM 1167 965351 - 965333 - T 83 -7.4 -4.84527 | opp_overlap 965333 965349, overlap 965326 965349 TCGATACATTAAAAA GGCTGG AGAAATA CCAGCC TTTTTGAGGGCTTAT TERM 1168 965333 - 965351 + T 81 -7.4 -4.60255 | opp_overlap 965326 965333 965349, overlap 965349 TCGATACATTAAAAA GGCTGG AGAAATA CCAGCC TTTTTGAGGGCTTAT potD 966436 - 965363 - | spermidine/putrescine extracellular binding protein potC 967205 - 966429 - | spermidine/putrescine ABC transporter permease protein potB 967996 - 967202 - | putative spermidine/putrescine ABC transporter permease protein potA 969134 - 967980 - | putative spermidine/putrescine ABC transporter ATP-binding protein murB 970067 - 969180 - | UDP-N-acetylenolpyruvoylglucosamine reductase TERM 1169 970125 - 970111 - R 100 -7.1 -5.42862 | opp_overlap 970111 ATACGCGTAAAAAAA TCGGC ATAAA GCCGA TACTATTATATCAAA TERM 1170 970227 - 970211 - R 73 -7.3 -4.12188 | opp_overlap 970211 970213 GCATTACTCCGAAAA CAGAGTC TAG AACTCTG TCTGTTGAGCTGAAA folK 970717 - 970217 - | 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase folB 971073 - 970714 - | dihydroneopterin aldolase folP 971880 - 971080 - | dihydropteroate synthase TERM 1171 971348 - 971330 - G 75 -10.4 -3.02144 | opp_overlap 971319, overlap 971332 971341 GTATTCTGTTGAACA GATTTGGA AAA TCCAAATC CTGGATCAATCCAAA folE 972473 - 971889 - | GTP cyclohydrolase I folC1 973785 - 972508 - | putative folypolyglutamate synthase 1 SpyM50969 974029 - 973874 - | hypothetical protein TERM 1172 974058 - 974044 - H 85 -2.8 -5.80727 | opp_overlap 974044, overlap 974037 AAAAACAAGAAAAAA GGCT GACTTCA AGCC TTCTTTTCTCTAAAA TERM 1173 974301 - 974280 - g 71 -6 -4.21812 | TTGTACCTAAAATAA GTCTTTTT CATCAC AAAAAGAC GGCAAAAAAAGAAAC SpyM50970 974117 - 975079 + | putative polysaccharide deacetylase TERM 1174 975127 - 975158 + T 100 -13.3 -5.73672 | opp_overlap 975127 ACTGTAAACTAAAAA GACAGTTATGAAA AAATTC TTTCATAACTGTC TTTTTTTGATTGTTT TERM 1175 975158 - 975127 - T 100 -14 -4.99134 | opp_overlap 975127 ACTGTAAACTAAAAA GACAGTTATGAAAA AATT CTTTCATAACTGTC TTTTTTTGATTGTTT SpyM50971 976431 - 975196 - | putative D-alanyl-D-alanine carboxypeptidase TERM 1176 976631 - 976609 - R 100 -15 -5.50499 | TGATATTCAAAAAAA CCCGCTATTT TAA AAATAGCGGG CTAATCAGCTTATTT rplL 977035 - 976670 - | 50S ribosomal protein L7/L12 rplJ 977600 - 977100 - | 50S ribosomal protein L10 TERM 1177 977665 - 977644 - H 85 -3.7 -5.64274 | CTAGGTACAAAAAAA TCGCACCTA AACC TAGACACGA AAGTACAAATACGTT TERM 1178 977906 - 977890 - H 70 -2.9 -5.18357 | opp_overlap 977893, overlap 977891 977893 977902 TAAGGTATGAAAAAA GCACCTC TAA GAGGTAT ACTTGTAGTTCACCA TERM 1179 978818 - 978795 - g 83 -7.4 -4.75309 | CTAAAGGTAACAAAA CAACGACCCC TAAA GAAGTCGCTG CTATTGAACATTGGA SpyM50974 977945 - 978931 + | insertion sequence IS1239 putative transposase TERM 1180 979647 - 979630 - g 73 -7.1 -4.12066 | GAGAAAACACAAGAA TTCCAAA GCCT TTTGGAA AATCTCCTTCGAACA trmE 979021 - 980397 + | tRNA modification GTPase TrmE TERM 1181 980422 - 980444 + T 100 -16.4 -4.82667 | opp_overlap 980422 CTAATCATCACAAAA GAGCTGGAAC ACT GTTCCAGCTC TTTTTGCTGTCATAA TERM 1182 980444 - 980422 - T 100 -16.4 -4.51097 | opp_overlap 980422 CTAATCATCACAAAA GAGCTGGAAC ACT GTTCCAGCTC TTTTTGCTGTCATAA pepV 981874 - 980465 - | dipeptidase PepV SpyM50977 982601 - 981999 - | NAD(P)H-dependent quinone reductase uvrC 984582 - 982786 - | excinuclease ABC subunit C TERM 1183 983402 - 983388 - G 77 -6.4 -4.63592 | opp_overlap 983393, overlap 983391 983393 CGTCAACAAAAACAA CCATAG CCG CTACGG GGCTTGTCCCTTGAA TERM 1184 984112 - 984163 + g 81 -7 -4.77896 | gap 1, opp_overlap 984112 984111 984109, overlap 984113 GTAATAAAAACAGAC CTTATT-GATAGGATTTTTACACTT TTT AAATGGAAAAATCCTATCTAATAAC TTTTTAACTTCATTA TERM 1185 984113 - 984162 + g 79 -10.5 -3.45653 | gap 1, opp_overlap 984112 984111 984109, overlap 984112 TAATAAAAACAGACC TTATT-GATAGGATTTTTACACTT TTT AAATGGAAAAATCCTATCTAATAA CTTTTTAACTTCATT SpyM50979 986081 - 984684 - | putative succinate-semialdehyde dehydrogenase SpyM50980 987242 - 986196 - | extracellular solute-binding protein TERM 1186 986365 - 986376 + g 70 -5.8 -4.45485 | CTATTACTAGTTGAC TGCC CAAA GGCA TTTTGTACATCTGAT SpyM50981 988024 - 987236 - | response regulator protein TERM 1187 987451 - 987464 + g 84 -6.7 -4.98616 | opp_overlap 987450 987451 TGTAATCACTTAAAG GCATC TGAA GATGC TTTTTGATATTTTGA SpyM50982 989677 - 988028 - | sensor histidine kinase TERM 1188 989305 - 989293 - G 74 -4.9 -4.76041 | opp_overlap 989293 989298 CAGATTTACTAAAAA CATTT CCT AAATG TGGGTTACTAGCAAA TERM 1189 989761 - 989794 + r 86 -9.7 -4.24342 | opp_overlap 989761 TCTTAAAAGGAAAAA GGTAAGCAAAACAAG AAAA CTTGTCTTACTTACC TTTATTGCTAGGAGA TERM 1190 989794 - 989761 - R 100 -14.1 -5.0925 | opp_overlap 989761 TCTTAAAAGGAAAAA GGTAAGCAAAACAAG AAAA CTTGTCTTACTTACC TTTATTGCTAGGAGA SpyM50983 990640 - 989813 - | sugar phosphotransferase system (PTS),mannose/fructose family IID protein SpyM50984 991446 - 990637 - | sugar phosphotransferase system (PTS),mannose/fructose family IIC protein SpyM50985 991954 - 991463 - | sugar phosphotransferase system (PTS),mannose/fructose family IIB protein TERM 1191 991802 - 991812 + g 71 -6.8 -4.13304 | CAGTTTCATGCCGTT TGGC ACA GCCA TTTTAAGCGTCATTT SpyM50986 992398 - 991973 - | sugar phosphotransferase system (PTS),mannose/fructose family IIA protein TERM 1192 992438 - 992424 - R 73 -3.5 -5.1356 | CTCTATTAACAAAAA CCGCT GAATA AACGG TAATTGCTTATCTCA TERM 1193 992594 - 992574 - R 100 -11.3 -5.80248 | opp_overlap 992574 992578 TAAGATACAAAAAAA GAAATCAGT CAA ACTGATTTC TCGTGTCTGATTACC TERM 1194 992574 - 992594 + r 78 -11.3 -2.73067 | opp_overlap 992574, overlap 992578 TAAGATACAAAAAAA GAAATCAGT CAA ACTGATTTC TCGTGTCTGATTACC SpyM50987 993624 - 992605 - | hypothetical protein TERM 1195 993193 - 993165 - G 87 -6.2 -5.22289 | gap 1, opp_overlap 993165 993174, overlap 993169 TATTAAAGAGAAAAA TGACTGAAATTGC CTTG GCAATCTCA-TCA TCCTTTGCCTTAATG csrA 994191 - 993754 - | methionine sulfoxide reductase B TERM 1196 994317 - 994338 + r 90 -13.1 -2.82666 | opp_overlap 994317, overlap 994314 994313 TCTTGATTCAAAAAA GAGAGAACC TTGA GGTTCTCTC TGAGTTTTACTTTCC TERM 1197 994338 - 994317 - R 100 -13.1 -5.08824 | opp_overlap 994314 994313 994317 TCTTGATTCAAAAAA GAGAGAACC TTGA GGTTCTCTC TGAGTTTTACTTTCC TERM 1198 995080 - 995104 + r 71 -9.1 -3.18766 | overlap 995081 995084 995086 GCCTTGCTCACCACG TGGACCGGCTG GAC CTGCCGGGCCG GTTTTGCCTTGTGGG TERM 1199 995081 - 995103 + r 75 -10.4 -2.50778 | overlap 995080 995084 995086 CCTTGCTCACCACGT GGACCGGCTG GAC CTGCCGGGCC GGTTTTGCCTTGTGG TERM 1200 995622 - 995638 + r 83 -9.5 -3.84246 | TTTTAAATTTATCAT CCACTTT AGG AAAGTGG TTTCGTAATTCAGAG TERM 1201 996060 - 996038 - R 83 -9.2 -3.9693 | overlap 996040 CATCCATTGAAAGAA CACTCAAGAA GGC TTCTTGAGGG ACTTCAACAGAACCA TERM 1202 996058 - 996040 - R 82 -10.4 -3.57185 | overlap 996038 TCCATTGAAAGAACA CTCAAGAA GGC TTCTTGAG GGACTTCAACAGAAC TERM 1203 996712 - 996726 + r 100 -11.4 -5.58074 | opp_overlap 996711 996710 TAACTTGAAAAAGTG GCACCG ATT CGGTGC TTTTTTTGATACTTC TERM 1204 996790 - 996770 - R 100 -10.5 -5.37593 | opp_overlap 996765 996770 CTGCAAACTAAAAAA CAAGCGCTT TCA AAACGCTTG TTTTATCATTTTTAG TERM 1205 996770 - 996790 + r 95 -8.3 -4.72556 | opp_overlap 996770, overlap 996765 CTGCAAACTAAAAAA CAAGCGCTT TCA AAACGCTTG TTTTATCATTTTTAG SpyM50991 997463 - 996831 - | hypothetical protein SpyM50992 998227 - 997463 - | haloacid dehalogenase-like hydrolase SpyM50993 998979 - 998227 - | putative acyl-ACP thioesterase hemN 1000119 - 998989 - | coproporphyrinogen III oxidase SpyM50995 1000823 - 1000182 - | hypothetical protein TERM 1206 1000734 - 1000750 + g 70 -9.5 -2.7035 | opp_overlap 1000723 1000733 1000732 ATATGAAGCATAACC TTCCTGA AAT TCAGGAA TCATATCTAAGTAAA TERM 1207 1000896 - 1000857 - R 73 -10.2 -2.56914 | opp_overlap 1000863, overlap 1000863 TACTTTAGTAATTTA TAAAAAGAGACTTGGG CTAAACGC CCCAAGCCTCTTTCCA ATTGTTGGCAGAAGC TERM 1208 1000890 - 1000863 - R 100 -9.2 -4.92314 | opp_overlap 1000863, overlap 1000857 AGTAATTTATAAAAA GAGACTTGGG CTAAACGC CCCAAGCCTC TTTCCAATTGTTGGC TERM 1209 1000907 - 1000928 + r 79 -8.1 -4.11183 | opp_overlap 1000911, overlap 1000911 TTCCAATTGTTGGCA GAAGCCTTA GAAA TAAGGTTTC TTGTTTGTACTCAAC TERM 1210 1000911 - 1000924 + r 73 -5.3 -4.63952 | opp_overlap 1000911, overlap 1000907 AATTGTTGGCAGAAG CCTTA GAAA TAAGG TTTCTTGTTTGTACT SpyM50996 1002302 - 1000947 - | putative phosphoglucosamine mutase TERM 1211 1001983 - 1002029 + g 76 -4.5 -5.1523 | gap 1, overlap 1001984 AATTTGATGCCATTG TCAAGCGCAGG-GTTATGACTT GCAG AAATCATCACACCTGCACTTGC TTTTTCTGTTCTAAC TERM 1212 1001984 - 1002028 + g 70 -8 -3.68053 | gap 1, overlap 1001983 ATTTGATGCCATTGT CAAGCGCAGG-GTTATGACTT GCAG AAATCATCACACCTGCACTTG CTTTTTCTGTTCTAA TERM 1213 1002066 - 1002054 - G 70 -7.7 -3.63298 | overlap 1002052 TCTAACTAAATAAGA GACAC CAG GTGTC GCTAAAACGCCAAGT SpyM50997 1003312 - 1002356 - | hypothetical protein SpyM50998 1004160 - 1003309 - | hypothetical protein TERM 1214 1003569 - 1003545 - G 72 -8.7 -3.54935 | opp_overlap 1003521 CAAATTCTTTGGAAA TTGCCTTTG ATTCTGA CAAAGGCAA GTAGGCACAGGCTGC TERM 1215 1005477 - 1005462 - g 75 -5.4 -4.7219 | GATACTAAGATAAAA CAAGCT GAAA AGCTCG AGCAAATCATAGAAA SpyM50999 1004262 - 1005605 + | UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase SpyM51000 1005605 - 1006396 + | hypothetical protein TERM 1216 1006425 - 1006457 + T 75 -5.7 -4.76171 | gap 1, opp_overlap 1006426, overlap 1006420 GTCATCAAACAAAAA CTCCTAAGTAGGAC ACGATA GTTC-GCTTAGGAG TTTTATAGTTTTTTC SpyM51001 1007494 - 1006505 - | putative lipoate-protein ligase A TERM 1217 1010430 - 1010474 + r 90 -7.3 -5.13722 | opp_overlap 1010436, overlap 1010428 1010431 1010436 GGCTACTCTATTTGA AGTAAAGGATTTAGTTCTGTA TTG TAGAGGACTAAGTCCTTTTCG TTTTATTTTGATACG TERM 1218 1010431 - 1010473 + r 88 -10.8 -3.67149 | opp_overlap 1010436, overlap 1010428 1010430 1010436 GCTACTCTATTTGAA GTAAAGGATTTAGTTCTGTA TTG TAGAGGACTAAGTCCTTTTC GTTTTATTTTGATAC TERM 1219 1010436 - 1010468 + r 100 -9.3 -4.83677 | opp_overlap 1010436, overlap 1010428 1010431 1010430 TCTATTTGAAGTAAA GGATTTAGTTCTGTA TTG TAGAGGACTAAGTCC TTTTCGTTTTATTTT TERM 1220 1010580 - 1010595 + r 79 -3.3 -5.55695 | AGAACTCGTCTTTGT CCATT CTTTAT AATGG TTTTTTGTCTTCTTC TERM 1221 1010634 - 1010647 + r 73 -2.3 -5.42259 | opp_overlap 1010634 GATGCTTCTTTCAAA CGGAG TTCT CTCGG TTTTTTTAGCGCTAA TERM 1222 1010700 - 1010743 + r 76 -10.4 -2.58231 | opp_overlap 1010702, overlap 1010699 1010704 1010711 TTAATGTCATACAAA AACACCCCAAACGTTAGG GTTTTATA TCTAACGTTTGGGGTGCA GTTCATAGTTGTGCT TERM 1223 1010741 - 1010702 - R 100 -16.7 -4.98522 | opp_overlap 1010700 1010699 1010704 1010711 AATGTCATACAAAAA CACCCCAAACGTTAG GGTTTTATAT CTAACGTTTGGGGTG CAGTTCATAGTTGTG acoL 1012583 - 1010820 - | dihydrolipoamide dehydrogenase TERM 1224 1011534 - 1011550 + g 79 -5.1 -5.09426 | overlap 1011535 TGTTTTGATCTTCAT GCCTTTC TTA GAAAGGA TTTTTTGAAGTTCAA TERM 1225 1011535 - 1011549 + g 73 -8.6 -3.64933 | overlap 1011534 GTTTTGATCTTCATG CCTTTC TTA GAAAGG ATTTTTTGAAGTTCA pdhC 1014323 - 1012914 - | branched-chain alpha-keto acid dehydrogenase subunit E2 TERM 1226 1013267 - 1013245 - G 77 -6.3 -4.58213 | overlap 1013246 GAAGCAAGCACAAAA TCTGACAAG CTCAT CTTGTCAGC CCCATGGATAACAGG TERM 1227 1013266 - 1013246 - G 75 -9.8 -3.33843 | overlap 1013245 AAGCAAGCACAAAAT CTGACAAG CTCAT CTTGTCAG CCCCATGGATAACAG TERM 1228 1014212 - 1014251 + g 81 -5.8 -5.05782 | gap 1, opp_overlap 1014226 TGTCTGACATGATTT CAAGAAGGATATCACCTTC ATT GACGGT-ATCACCTTCTTG TTTTTTCCACTCGAT pdhB 1015509 - 1014508 - | putative pyruvate dehydrogenase E1 component,beta subunit pdhA 1016533 - 1015565 - | putative pyruvate dehydrogenase E1 component,alpha subunit TERM 1229 1015727 - 1015738 + g 80 -4.4 -5.28942 | ATAAGTACGATATTT GATC ATTG GATC TTTTTCTTTCCACTC TERM 1230 1016476 - 1016460 - G 73 -9.5 -3.1478 | opp_overlap 1016458, overlap 1016458 1016475 ACGAGTTTATTAATA CGTGAAT CAA ATTCACG AATACGTTCCATTTT TERM 1231 1016788 - 1016814 + r 95 -7.5 -5.26155 | gap 1, opp_overlap 1016788 ACAAAGCGATAAAAA TAAGC-TTAGCA AAAC TGCTAAAGCTTA TTTTTATGTTTCTAT TERM 1232 1016814 - 1016788 - R 89 -7.5 -4.95896 | gap 1, opp_overlap 1016788 ACAAAGCGATAAAAA TAAGC-TTAGCA AAAC TGCTAAAGCTTA TTTTTATGTTTCTAT SpyM51009 1018725 - 1016818 - | ABC transporter ATP-binding protein TERM 1233 1017105 - 1017130 + g 85 -7.6 -4.84359 | gap 1, overlap 1017102 TCTCTCCTGCTGCTA GGC-GGGCTAG TTCTT CTAGCTCTGCC TTTTTCTCAAGGTAA TERM 1234 1017930 - 1017946 + g 74 -5.1 -4.66318 | TGGCAATTTCTTTTT GCTGTTT GTC AAACTGC TTTTCTTCGGCTACT TERM 1235 1018762 - 1018747 - R 91 -5.4 -5.80364 | opp_overlap 1018747 ATTCTAACAAAAAAA TGCCCT TTTG AGGACA TTTTCAGCCTAGTTT SpyM51010 1019097 - 1018771 - | hypothetical protein TERM 1236 1019125 - 1019137 + r 78 -6.3 -4.78157 | opp_overlap 1019125 1019124 GTTGTACTAGGAAAT GGTTA AGA TAACC TTTCTTCTTTTTGGT SpyM51011 1019912 - 1019127 - | putative esterase TERM 1237 1020008 - 1020035 + r 75 -10 -2.81208 | gap 1, opp_overlap 1020008 1020011, overlap 1020007 1020005 GTTGTTAAAATCAAA GAAGG-TAGGCAG TTT TTGCCTAACCTTC CTATTTTCACTAACG TERM 1238 1020035 - 1020008 - R 86 -9.3 -4.19735 | gap 1, opp_overlap 1020008 1020007 1020005, overlap 1020011 GTTGTTAAAATCAAA GAAGG-TAGGCA GTTTT TGCCTAACCTTC CTATTTTCACTAACG SpyM51012 1021706 - 1020045 - | Zn-dependent hydrolase TERM 1239 1021896 - 1021872 - R 73 -2.2 -5.38497 | opp_overlap 1021890 ACGGAAATCAAAAAA TCACTGAC TTATTATTC GTCAATGA TTTAGATCGTTGATT SpyM51013 1022668 - 1021910 - | ABC transporter ATP-binding protein SpyM51014 1023534 - 1022665 - | ABC transporter permease protein SpyM51015 1023874 - 1023710 - | hypothetical protein SpyM51016 1024877 - 1023879 - | hypothetical protein TERM 1240 1024971 - 1024947 - H 79 -3.5 -5.45802 | opp_overlap 1024945 1024947 TTCTCAAAAGAAAAA GCACTTAGTAA TGA TTGCTAGGCGC TCTTGTGAAATCCAA TERM 1241 1026554 - 1026543 - g 72 -4.4 -4.70659 | CTTCAGATGGAAAAA CCAT TCTC ATGG TGGGACGCAATAACT fbpS 1025231 - 1026883 + | fibronectin/fibrinogen-binding protein TERM 1242 1026899 - 1026936 + T 100 -7.7 -5.89921 | opp_overlap 1026899 TAAGCAACTAAAAAA CAGCTCTCCTAGGAAAG TTAT TTCCCCTAGGAGAACTG TTTTTTTATTCTGAT TERM 1243 1026936 - 1026899 - T 100 -13.6 -5.32565 | opp_overlap 1026899 TAAGCAACTAAAAAA CAGCTCTCCTAGGAAA GTTATT TCCCCTAGGAGAACTG TTTTTTTATTCTGAT SpyM51018 1028189 - 1026942 - | hypothetical protein SpyM51019 1029360 - 1028179 - | hypothetical protein mutX 1029894 - 1029418 - | mutator MutX protein (7,8-dihydro-8-oxoguanine-triphosphatase) TERM 1244 1030061 - 1030112 + r 100 -11.4 -4.9448 | gap 2, opp_overlap 1030066 1030069, overlap 1030066 ATCAATTTAAACTAT CA--AAAGAGCCTTGTCATATCAA CGATAA TTGATATGACAAGGTTCTTTAATG TTTTATTTAATCACT TERM 1245 1030066 - 1030105 + r 100 -17.5 -4.14724 | opp_overlap 1030066 1030069, overlap 1030061 TTTAAACTATCAAAA GAGCCTTGTCATATCAA CGATAA TTGATATGACAAGGTTC TTTAATGTTTTATTT TERM 1246 1030105 - 1030066 - R 100 -16 -4.39386 | opp_overlap 1030066 1030061, overlap 1030069 TTTAAACTATCAAAA GAGCCTTGTCATATCAAC GATA ATTGATATGACAAGGTTC TTTAATGTTTTATTT TERM 1247 1030102 - 1030069 - R 100 -16.3 -2.86636 | opp_overlap 1030066 1030061, overlap 1030066 AAACTATCAAAAGAG CCTTGTCATATCAAC GATA ATTGATATGACAAGG TTCTTTAATGTTTTA speH 1031208 - 1030498 - | streptococcal exotoxin H precursor TERM 1248 1032151 - 1032128 - R 83 -5.8 -5.18726 | opp_overlap 1032129 1032130 1032137, overlap 1032130 TCTTTATAACAAAAA CAGCCCCCGC AAAA GCGAGGGCAT TTGTCTTATCTAAAG TERM 1249 1032129 - 1032150 + r 75 -7.1 -4.31164 | opp_overlap 1032128 1032130, overlap 1032130 1032137 CTTTATAACAAAAAC AGCCCCCGC AAAA GCGAGGGCA TTTGTCTTATCTAAA TERM 1250 1032149 - 1032130 - R 95 -12.8 -4.22377 | opp_overlap 1032130 1032129 1032137, overlap 1032128 TTTATAACAAAAACA GCCCCCGC AAAA GCGAGGGC ATTTGTCTTATCTAA TERM 1251 1032130 - 1032149 + r 79 -10.6 -3.17975 | opp_overlap 1032128 1032130, overlap 1032129 1032137 TTTATAACAAAAACA GCCCCCGC AAAA GCGAGGGC ATTTGTCTTATCTAA lys 1033518 - 1032184 - | putative phage lysin protein TERM 1252 1033252 - 1033239 - G 81 -6.7 -4.78107 | overlap 1033242 CATCACTATCAAAAA TAGCC GCAT GGCTA TACGGTGTAACACCT SpyM51026 1033815 - 1033630 - | putative phage membrane protein SpyM51027 1034108 - 1033812 - | putative phage membrane protein TERM 1253 1033990 - 1034018 + g 85 -6.8 -5.01732 | gap 1 GAGTCCTTGAGTTGA GCCATGGCAAACT CATT AGCTT-CCATGGC TTTTTTAAAGGGATT SpyM51028 1034750 - 1034118 - | hypothetical protein SpyM51029 1035181 - 1034753 - | hypothetical protein TERM 1254 1034935 - 1034966 + g 77 -5.2 -4.93296 | gap 1, overlap 1034923 GTAGGCCGTTGAGCT CGTCGAGTTTAGCGG GGT CTGCTA-GCTTGATG TTTTTGTGCTCATCA SpyM51030 1037079 - 1035193 - | hypothetical protein TERM 1255 1035701 - 1035677 - G 74 -6.5 -4.32034 | overlap 1035681 GCATTACTATTAAAA TCCATCTTAGC CGA GCTAAGATCAA TAAGCATAGCGCCAT TERM 1256 1035697 - 1035681 - G 71 -9.5 -2.78495 | overlap 1035677 TACTATTAAAATCCA TCTTAGC CGA GCTAAGA TCAATAAGCATAGCG TERM 1257 1035883 - 1035898 + g 73 -7.6 -3.96624 | ATCAGCCCTAATCTT GATAGC CTCT GCTATC TTTGTGGTAAAGGTG TERM 1258 1036556 - 1036566 + g 71 -6.8 -4.10925 | overlap 1036563 CCGATTTTATCATTG GCCA TTG TGGC TTTTAAGCCGTCTAT TERM 1259 1036594 - 1036606 + g 70 -3.4 -4.86033 | overlap 1036579 1036578 1036597 1036598 TATGCTAGCTTGATA GCTA GCTGA TAGC TTTTTATCAGCGTTT SpyM51031 1038209 - 1037094 - | putative phage hyaluronidase TERM 1260 1038008 - 1038023 + g 74 -9 -3.5936 | overlap 1038006 CTCCAGTTTTACCTT GGAGAC CAGT GTCTCC TTTAGGACCTTTGGG SpyM51032 1040185 - 1038206 - | hypothetical protein SpyM51033 1041037 - 1040195 - | hypothetical protein TERM 1261 1040986 - 1041016 + g 81 -5.4 -5.1244 | opp_overlap 1040983 1040990, overlap 1040988 1040990 CAATATTATAAATAC CAAAGTCAGACAAC CTA GTTGCCTGACTCTC TTTTTCTATTAATAA TERM 1262 1040988 - 1041014 + g 77 -8 -4.18115 | opp_overlap 1040983 1040990, overlap 1040986 1040990 ATATTATAAATACCA AAGTCAGACAAC CTA GTTGCCTGACTC TCTTTTTCTATTAAT TERM 1263 1041012 - 1040990 - G 93 -12.8 -4.05181 | opp_overlap 1040988 1040986 1040990, overlap 1040983 ATTATAAATACCAAA GTCAGACAAC CTA GTTGCCTGAC TCTCTTTTTCTATTA TERM 1264 1040990 - 1041012 + g 83 -10.6 -3.66691 | opp_overlap 1040990 1040983, overlap 1040988 1040986 ATTATAAATACCAAA GTCAGACAAC CTA GTTGCCTGAC TCTCTTTTTCTATTA SpyM51034 1045431 - 1041049 - | putative phage minor tail protein TERM 1265 1041420 - 1041440 + g 73 -10.5 -2.77678 | overlap 1041417 1041435 1041436 AAGCGCGTCTAATTG TTGCTGCTA CAT TAGCGGCAA TGCTGTTAGCTATTG TERM 1266 1043556 - 1043576 + g 70 -9.7 -2.73124 | overlap 1043555 CGCTAGCGGGGTTCA TCACTGCCC AAA GGGCAATGA CTTTAGGGGCTAAAG SpyM51035 1045679 - 1045446 - | hypothetical protein TERM 1267 1045515 - 1045526 + g 72 -4.4 -4.74132 | overlap 1045513 ATCACTATCGGCTTG GCTA CGGC TAGC TTTTTGATACGATCT SpyM51036 1046209 - 1045754 - | hypothetical protein TERM 1268 1046257 - 1046236 - R 84 -7.9 -4.54727 | opp_overlap 1046237 1046249, overlap 1046237 CTTTTTAAATCAAAA TGGGGTAGC AGTT GCCACCCCT GTGTGCTATTTAGTG TERM 1269 1046237 - 1046256 + r 74 -9.2 -3.04022 | opp_overlap 1046237 1046236, overlap 1046249 TTTTTAAATCAAAAT GGGGTAGC AGTT GCCACCCC TGTGTGCTATTTAGT TERM 1270 1046256 - 1046237 - R 85 -11.4 -3.32354 | opp_overlap 1046237 1046249, overlap 1046236 TTTTTAAATCAAAAT GGGGTAGC AGTT GCCACCCC TGTGTGCTATTTAGT SpyM51037 1046862 - 1046263 - | putative phage major tail protein SpyM51038 1047233 - 1046874 - | hypothetical protein TERM 1271 1047160 - 1047189 + g 75 -3 -5.32608 | gap 1, opp_overlap 1047160 TTAGGCAATTTAAAA TAGATTGGTATGT CTAAA AC-TCCCAATCTA TTTTTTACCTTTTTT SpyM51039 1047581 - 1047237 - | hypothetical protein SpyM51040 1047856 - 1047578 - | hypothetical protein SpyM51041 1048223 - 1047867 - | hypothetical protein TERM 1272 1048174 - 1048135 - G 72 -9.4 -2.99471 | gap 1, overlap 1048139 TTACTTTCATATATA GCAAGGGTGATGAT-CTCA TCT TGCGCACCATCACCCTTGG AAATACCTATAAAGA TERM 1273 1048170 - 1048139 - G 70 -8.8 -3.35197 | gap 1, overlap 1048135 TTTCATATATAGCAA GGGTGATGAT-CTCA TCT TGCGCACCATCACCC TTGGAAATACCTATA SpyM51042 1049122 - 1048235 - | hypothetical protein TERM 1274 1048693 - 1048714 + g 71 -3.7 -4.90918 | overlap 1048694 ATGCAGACAGCGCTT TTTGAAGGC CAAC GCCTTTAAC TTTTGTTGGTTTTGT SpyM51043 1049704 - 1049135 - | hypothetical protein TERM 1275 1049826 - 1049811 - R 81 -5.4 -5.24796 | opp_overlap 1049811 TGGACACAATAAAAA GCCGTA TTGC TACGAC TTTGGTTTCTAAAGG SpyM51044 1050132 - 1049866 - | hypothetical protein SpyM51045 1050325 - 1050137 - | putative phage membrane protein TERM 1276 1050341 - 1050364 + r 72 -3.8 -4.91109 | gap 1 GAAGCAGTTTACTGT GGAGGCGG-TG GGT CATCCTCCTTC TTTTTCTAATACAGC SpyM51046 1051795 - 1050353 - | putative phage minor head protein TERM 1277 1050455 - 1050483 + gr 80 -4.6 -5.24796 | AATATGTTCTAATTG CCCCATTATC TCTTCAAAT GATAAAGGGG TTTTTGTTATATCAA SpyM51047 1053293 - 1051761 - | putative phage portal protein TERM 1278 1052787 - 1052807 + gr 70 -5.3 -4.48175 | GATAACAAAAGTTTG CTCGGCCGG GAG CTGGTAGAG TTTTACTTCGGTTTT SpyM51048 1054586 - 1053309 - | putative phage terminase, large subunit SpyM51049 1055028 - 1054576 - | putative phage terminase, small subunit TERM 1279 1054738 - 1054753 + g 70 -3.2 -4.93661 | overlap 1054740 CTGACCAAACTCTCC AACGCT AATG AGCGTC TTTTCTTGTTGGTCT TERM 1280 1054876 - 1054893 + g 73 -9.9 -3.10732 | TTTAATGTCAGGTTT GGTCAAG TTTT CTTGACC TATTGACCTTGCTGT TERM 1281 1055059 - 1055037 - R 78 -6.3 -4.84274 | opp_overlap 1055037 CAAGCATAGCAAAAA GGCAAGACA CTATC TGCCTTACC TTCAAACTCATACTA SpyM51050 1055534 - 1055118 - | hypothetical protein TERM 1282 1055370 - 1055382 + g 71 -4.9 -4.48713 | CACATCCTCAGTAAC TTTTG AAA CAAAA TTTGTTCTTCCTCCA SpyM51051 1055939 - 1055667 - | putative phage membrane protein TERM 1283 1056118 - 1056142 + r 71 -7.1 -3.87851 | CTAGACCCCTAACTG CGCCTTAACTG CTT CAAGTAAGGCG TTCTGATTTTTTTCT SpyM51052 1057425 - 1056103 - | SNF2 family phage protein TERM 1284 1056660 - 1056672 + g 73 -7.7 -3.95621 | opp_overlap 1056660 1056659 ACTCCAACACCAAAT CAGCT TCA AGCTG TTTGTAGGCTTTCAT SpyM51053 1057697 - 1057422 - | hypothetical protein TERM 1285 1057974 - 1057990 + r 70 -3.1 -4.95854 | overlap 1057980 TTTCCAATTCAGTTT TGATTTT TTA AAAATTA TTTTTAAATTTTTTA TERM 1286 1057980 - 1057998 + r 93 -6.2 -5.93252 | overlap 1057974 1057995 ATTCAGTTTTGATTT TTTAAAAA TTA TTTTTAAA TTTTTTATTTTTAAA SpyM51054 1060467 - 1058083 - | putative phage DNA primase/helicase protein TERM 1287 1059217 - 1059237 + g 74 -3.9 -5.06451 | overlap 1059218 CTTCAAATACTCCTC TGCGTTTGG CAA CCAGATGCC TTTTTTAGCGTCGTA SpyM51055 1062394 - 1060472 - | putative phage DNA polymerase TERM 1288 1062435 - 1062411 - R 78 -6.4 -4.56597 | gap 1, opp_overlap 1062412 1062415, overlap 1062412 CCTCTCCTTTAAAAA TGAGGAGCCTC TAAA GAGGC-CCTCT ACTATAAAATGTCGT TERM 1289 1062434 - 1062412 - R 78 -9.9 -3.33744 | gap 1, opp_overlap 1062412 1062415, overlap 1062411 CTCTCCTTTAAAAAT GAGGAGCCTC TAAA GAGGC-CCTC TACTATAAAATGTCG TERM 1290 1062412 - 1062434 + r 74 -9.9 -2.64243 | gap 1, opp_overlap 1062412 1062411, overlap 1062415 CTCTCCTTTAAAAAT GAGGAGCCTC TAAA GAGGC-CCTC TACTATAAAATGTCG SpyM51056 1062994 - 1062437 - | hypothetical protein SpyM51057 1064166 - 1063009 - | hypothetical protein TERM 1291 1063700 - 1063711 + g 70 -5.8 -4.4078 | CCTAGAGCGTACAGC CCCA TCTG TGGG TTTTGGTTAGCAGAC SpyM51058 1064465 - 1064166 - | hypothetical protein TERM 1292 1064288 - 1064299 + g 75 -5.8 -4.75472 | TCCCTTCTTCAACCT TGGC TTTA GCCA TTTTCTTAATATCAG TERM 1293 1064512 - 1064530 + r 100 -9.6 -5.15634 | TTGTGTATAATTGTT GACGGTTT CCT AAGCCGTC TTTTTTGATGCAATC SpyM51059 1064756 - 1064553 - | hypothetical protein SpyM51060 1064905 - 1064753 - | hypothetical protein SpyM51061 1065285 - 1064902 - | hypothetical protein SpyM51062 1065500 - 1065285 - | hypothetical protein SpyM51062A 1065651 - 1065481 - | hypothetical protein SpyM51063 1065964 - 1065653 - | hypothetical protein TERM 1294 1065765 - 1065783 + g 74 -6 -4.47551 | AATAAACGGAAACCT TCGTAATC AAT GAATACGA TTTTATGCGTTGGAT TERM 1295 1066011 - 1066032 + r 76 -4.4 -5.22943 | TAGAATTTTTGATAA GGGGCTGA CTGCAA TCAGTTCC TTTTTTGCATTTACT SpyM51064 1066234 - 1066043 - | putative phage DNA-binding protein TERM 1296 1066178 - 1066204 + g 71 -3.8 -4.91109 | overlap 1066179 ATCACTCTTCTTGAT ATTGTTACTTTT TAG GAAGGTAACAAC TTTTTCTCGTCCAAC SpyM51065 1066285 - 1067073 + | putative phage membrane protein SpyM51066 1067269 - 1067099 - | hypothetical protein SpyM51067 1067565 - 1067915 + | putative phage DNA-binding protein SpyM51068 1067918 - 1068304 + | hypothetical protein SpyM51069 1068316 - 1068582 + | hypothetical protein TERM 1297 1069752 - 1069740 - g 77 -6.3 -4.57341 | AAGTGCCCTTAAAAA CTATC ATG GATAG AGTTGGACATGCTGA SpyM51070 1068710 - 1069849 + | phage integrase TERM 1298 1069919 - 1069885 - T 88 -5.1 -5.66338 | gap 1, opp_overlap 1069882 1069875 1069885 AAACACAAGAAAAAA CCTTGACATCTTCAAC AAAC GTTGAT-ATGACAAGG TTCTTTAATGTTTTA rmlB 1070972 - 1069932 - | dTDP-glucose 4,6-dehydratase rmlC 1071809 - 1071216 - | dTDP-4-dehydrorhamnose 3,5-epimerase rmlA 1072678 - 1071809 - | glucose-1-phosphate thymidyl transferase SpyM51074 1073842 - 1072736 - | FAD dependent oxidoreductase TERM 1299 1073008 - 1073020 + g 70 -3.4 -4.83615 | opp_overlap 1073008 GCAAATAAGTAAGAG CTTG CATTT CAAG TTTTTCTAAAACCTG SpyM51075 1074670 - 1073882 - | NIF3 (NGG1p interacting factor 3) family protein TERM 1300 1073962 - 1073972 + g 73 -6.8 -4.15066 | overlap 1073953 1073952 CTTCTTTCCACCCTT GGAG TTT CTCC TTTAATTTCTCCGTA SpyM51076 1075346 - 1074660 - | hypothetical protein TERM 1301 1075434 - 1075406 - R 100 -7.5 -5.61596 | opp_overlap 1075412 ACCTCCATAAAAAAA GAAAACCAAAGGC TAG GCTTTCGATTTTC CATAAGTATCTTGAT nth 1076074 - 1075418 - | putative endonuclease III TERM 1302 1075687 - 1075707 + g 73 -5.4 -4.56597 | opp_overlap 1075701, overlap 1075689 GAACACCATAAACCT CTGCCAAT ACCAC ATTGGCTG TTTTTCGGCCAACAC SpyM51078 1076754 - 1076071 - | putative DNA replication protein DnaD apt 1077353 - 1076835 - | adenine phosphoribosyltransferase SpyM51080 1079713 - 1077503 - | putative single-stranded-DNA-specific exonuclease TERM 1303 1079621 - 1079635 + g 80 -6.4 -4.82128 | AATCAACTGAGCGGC GGTCTG GGT TAGACC TTTTGTCTTTGCTAG TERM 1304 1079657 - 1079675 + g 85 -8.9 -4.17186 | opp_overlap 1079657 1079660, overlap 1079653 CTTTGCTAGCTTAAA GAAGCCA TCATC TGGCTTC TTGTCTTTTATTTTC TERM 1305 1079675 - 1079657 - G 74 -8.9 -3.59979 | opp_overlap 1079657 1079653, overlap 1079660 CTTTGCTAGCTTAAA GAAGCCA TCATC TGGCTTC TTGTCTTTTATTTTC SpyM51081 1080474 - 1079710 - | short chain dehydrogenase rnz 1081403 - 1080474 - | ribonuclease Z SpyM51083 1082053 - 1081418 - | hypothetical protein SpyM51084 1083284 - 1082046 - | putative GTPase miaA 1084256 - 1083357 - | tRNA delta(2)-isopentenylpyrophosphate transferase TERM 1306 1084533 - 1084510 - g 76 -3.1 -5.29445 | overlap 1084531 CCTGAAGAAGAAAAA GCTGCTTTC ATTGAA GAAAACCGC AAAAAAGCTGCGCGT TERM 1307 1084559 - 1084540 - g 72 -3.4 -5.15117 | overlap 1084531 GAAAACCGCAAAAAA GCTGCGCG TCGT CGTGTAGC TCGCTAACGTGACAA SpyM51086 1084390 - 1084566 + | hypothetical protein TERM 1308 1084590 - 1084617 + T 73 -3.3 -5.20216 | opp_overlap 1084590 TGGATCAATTTAAAA GAGACTAGCAC ATTAAA GTGCCGGCCTC TTTTTTAGTAATCTC SpyM51087 1085592 - 1084684 - | putative exfoliative toxin TERM 1309 1085159 - 1085146 - G 76 -4.5 -5.06414 | opp_overlap 1085154 CTGTCCTAATAAAAA CTGCC TACT AGCAG GTGCTGTTAATGCCG SpyM51088 1086248 - 1085829 - | hypothetical protein SpyM51089 1086488 - 1086297 - | hypothetical protein TERM 1310 1086483 - 1086499 + g 73 -8.1 -3.86916 | TTCACTGGTATCTCG TTGCAAA GTC TTTGCAA TTTGGTCTCATCATC TERM 1311 1086548 - 1086529 - R 95 -7.2 -5.31275 | opp_overlap 1086529 CTGTATCACAAAAAA CAAACCAG TTTC CTGATTTG TTTTGAGATATTAGG SpyM51090 1087545 - 1086559 - | hypothetical protein TERM 1312 1087604 - 1087622 + H 84 -3.1 -5.75342 | GGAAAAACAAGTCTA GGCAAGC CATTT GTTTGTC TTTTTTTTCACAAAA SpyM51091 1087741 - 1088043 + | hypothetical protein TERM 1313 1088180 - 1088170 - T 73 -5.4 -4.58663 | opp_overlap 1088170 AGCACTTGCTAAAAA TGGT TTC ACCA TCTCATCAATAATTA TERM 1314 1088387 - 1088372 - T 90 -2.6 -6.11392 | gap 1, opp_overlap 1088365 1088372, overlap 1088373 AAAGAAACAAAAAAA GCCT-AT CAA ATAAGGC TTTTTTATATGATTT TERM 1315 1088372 - 1088387 + T 77 -2.6 -5.43487 | gap 1, opp_overlap 1088372 1088373, overlap 1088365 AAAGAAACAAAAAAA GCCT-AT CAA ATAAGGC TTTTTTATATGATTT TERM 1316 1088553 - 1088584 + T 84 -11.8 -3.12069 | opp_overlap 1088554 1088560, overlap 1088560 TCTAACCAGAAGACA ATAAAAAGTTGAGG AAAA CCTCAACTTTTTAG ATTTATTACAATTCA TERM 1317 1088583 - 1088554 - T 100 -15.3 -3.79995 | opp_overlap 1088553 1088560, overlap 1088560 CTAACCAGAAGACAA TAAAAAGTTGAGG AAAA CCTCAACTTTTTA GATTTATTACAATTC TERM 1318 1088560 - 1088577 + T 100 -9.9 -4.86939 | opp_overlap 1088554 1088560, overlap 1088553 AGAAGACAATAAAAA GTTGAGG AAAA CCTCAAC TTTTTAGATTTATTA TERM 1319 1088577 - 1088560 - T 100 -9.9 -5.31072 | opp_overlap 1088560 1088553, overlap 1088554 AGAAGACAATAAAAA GTTGAGG AAAA CCTCAAC TTTTTAGATTTATTA rpsA 1089795 - 1088590 - | 30S ribosomal protein S1 TERM 1320 1089818 - 1089833 + r 83 -9 -4.26344 | opp_overlap 1089818 AATCCTCCAACAAAA GCTAGC CAAT GCTAGC TTTTGATAACAATAT TERM 1321 1089833 - 1089818 - R 90 -9 -4.64334 | opp_overlap 1089818 AATCCTCCAACAAAA GCTAGC CAAT GCTAGC TTTTGATAACAATAT SpyM51093 1090418 - 1090185 - | hypothetical protein TERM 1322 1090457 - 1090472 + r 75 -9 -3.46858 | opp_overlap 1090457, overlap 1090455 1090453 CACAAAATCAAAAAA GCTTGC AAGA GCAAGC TCTATTTTAATCTAC TERM 1323 1090472 - 1090457 - R 100 -9 -5.50313 | opp_overlap 1090457 1090455 1090453 CACAAAATCAAAAAA GCTTGC AAGA GCAAGC TCTATTTTAATCTAC SpyM51094 1091504 - 1090479 - | branched-chain amino acid aminotransferase TERM 1324 1091354 - 1091365 + g 71 -7.2 -3.91858 | opp_overlap 1091354 GTTGTCCATAATGAA GCGC TGGA GCGC TTTCTGAGATATGTA TERM 1325 1091627 - 1091602 - R 95 -10.7 -4.49344 | opp_overlap 1091601 1091609, overlap 1091609 AAATTTACCATAAAA TTAAAAAGAGT TTTC ACTCTTTTTAA CGTGTTCTAGCTACC TERM 1326 1091620 - 1091609 - R 76 -4.4 -5.1417 | opp_overlap 1091601 1091609, overlap 1091602 CCATAAAATTAAAAA GAGT TTTC ACTC TTTTTAACGTGTTCT parC 1094083 - 1091624 - | DNA topoisomerase IV subunit A TERM 1327 1093388 - 1093402 + g 82 -4.2 -5.40004 | AACGACACGTCCCTT GCCTGT TTC GTAGGC TTTTTTGATTTCGTC SpyM51096 1095099 - 1094281 - | hypothetical protein TERM 1328 1094842 - 1094854 + g 73 -7.7 -3.84808 | opp_overlap 1094842, overlap 1094846 TCCAGAAACATCATA GGTTG AGG CAACC TTCTTATGGCTTGGA parE 1097118 - 1095166 - | DNA topoisomerase IV subunit B TERM 1329 1095872 - 1095888 + g 86 -2.3 -6.01725 | GGGGTTAATTTTCCC GACAA CAAGCCT TTGTC TTTTTTGTTTTTCTT TERM 1330 1096480 - 1096498 + g 81 -7.5 -4.56597 | ATCTCCACGAAGATC TGTCAAG CTCAT CTTGACA TTTTTCAAAAGAAAA TERM 1331 1097168 - 1097187 + H 72 -3.6 -5.06103 | overlap 1097171 AAGTTTTTTACCAAT TTTGCAAA ATAA TTTGCTAA TTTTTTCCGAATTCT SpyM51098 1097250 - 1097891 + | putative glycerol-3-phosphate acyltransferase PlsY TERM 1332 1097927 - 1097903 - T 100 -13.7 -4.33767 | opp_overlap 1097903 ATAAATTTACTAAAA GCCTGACTTTC TCT GAAAGTCAAGC TTTTTTGTTTTAACT TERM 1333 1097903 - 1097927 + T 100 -11.5 -5.80951 | opp_overlap 1097903 ATAAATTTACTAAAA GCCTGACTTTC TCT GAAAGTCAAGC TTTTTTGTTTTAACT pyrC 1099217 - 1097949 - | dihydroorotase TERM 1334 1098639 - 1098628 - G 72 -4.4 -4.82678 | CCACAAAAATGAAAA TGCT CCTC AGCA ATACCTTCATTAAAA ung 1100002 - 1099349 - | uracil-DNA glycosylase TERM 1335 1100112 - 1100084 - R 86 -9.7 -4.33928 | opp_overlap 1100082 1100086, overlap 1100086 CATTTTAAATAGAAA GACCCTGAAAATA TGA TATTTCCAGGGTT AATATTCGTTTTTTA TERM 1336 1100086 - 1100110 + r 78 -10.1 -3.46844 | opp_overlap 1100086 1100084, overlap 1100082 TTTTAAATAGAAAGA CCCTGAAAATA TGA TATTTCCAGGG TTAATATTCGTTTTT TERM 1337 1100110 - 1100086 - R 93 -12.3 -3.76586 | opp_overlap 1100082 1100086, overlap 1100084 TTTTAAATAGAAAGA CCCTGAAAATA TGA TATTTCCAGGG TTAATATTCGTTTTT SpyM51101 1100785 - 1100135 - | transport system membrane protein SpyM51102 1101677 - 1100814 - | extracellular solute-binding protein TERM 1338 1101547 - 1101569 + g 75 -2.7 -5.34309 | gap 1 GGCTGATAGGTTCCT GGGGTAGCTA CTTT TAAC-ACCCC TTTTTCTTTGATAGT SpyM51103 1103249 - 1101795 - | amidase pyrE 1104075 - 1103446 - | orotate phosphoribosyltransferase pyrF 1104825 - 1104133 - | orotidine 5'-phosphate decarboxylase TERM 1339 1104802 - 1104766 - G 93 -9.6 -4.7153 | opp_overlap 1104759, overlap 1104757 AAATAAGTCTAAAAA TGCTTTAGTCTCCTCA AATGA TGAAAAGTCTAAAGCA ATAATTGGGCGTTCT TERM 1340 1104896 - 1104873 - R 100 -12.4 -4.81685 | overlap 1104887 ATTAAGCACCAAAAA GCCTCGCTAC CAAA GAAGCGAGGC TACAGCAAACTAAAA SpyM51106 1105638 - 1105102 - | hypothetical protein SpyM51107 1105860 - 1106765 + | LysR family regulatory protein TERM 1341 1106795 - 1106830 + T 70 -2.5 -5.17353 | opp_overlap 1106806 GTCATACTAAAAAAA CACGGTAGTAAGACC TGTATC GGTCAAGTTATCGTG TTTTTTGATAAATAT TERM 1342 1107588 - 1107616 + T 70 -6.8 -4.09805 | gap 1, opp_overlap 1107589 1107592, overlap 1107589 AAAGGCGTGATTATA AGCATAGACATCC AAAA GGATGTCTA-GCG TTTGATTATTAGTCA TERM 1343 1107589 - 1107615 + T 78 -10.3 -3.0516 | gap 1, opp_overlap 1107589 1107592, overlap 1107588 AAGGCGTGATTATAA GCATAGACATCC AAAA GGATGTCTA-GC GTTTGATTATTAGTC TERM 1344 1107615 - 1107589 - T 80 -10.3 -3.40899 | gap 1, opp_overlap 1107589 1107588, overlap 1107592 AAGGCGTGATTATAA GCATAGACATCC AAAA GGATGTCTA-GC GTTTGATTATTAGTC TERM 1345 1107613 - 1107592 - T 82 -11.7 -2.86271 | opp_overlap 1107589 1107588, overlap 1107589 GCGTGATTATAAGCA TAGACATCC AAAA GGATGTCTA GCGTTTGATTATTAG deoD 1108338 - 1107625 - | putative purine nucleoside phosphorylase punA 1109810 - 1109001 - | purine nucleoside phosphorylase SpyM51111 1110234 - 1109794 - | ArsC family protein deoB 1111464 - 1110253 - | phosphopentomutase TERM 1346 1111248 - 1111259 + g 72 -4.4 -4.8083 | CAGTAGGATTATCTT CTGT TGGA ACAG TTTTTAGTGGTATTG TERM 1347 1111425 - 1111390 - G 71 -7 -4.03141 | gap 1 ACCAGCATTAAAGAA TTTGTCAGCATCTGGTG CTG CACCA-ATACCGACAGA GTCTAAAACAACCAA rpiA 1112224 - 1111541 - | ribose-5-phosphate isomerase A TERM 1348 1111891 - 1111908 + g 74 -4.2 -5.17576 | CCCAGATGTATTCTT TTGTTG GTGTTG CAACAA TTTTTTCCATTAGTA TERM 1349 1114665 - 1114648 - g 75 -2.7 -5.1925 | overlap 1114649 1114658 CCAGAAGTCAAAAAA CTTCAGG CAAT CCTAAAA GAAGGACAACTAGTG clpL 1112602 - 1114701 + | putative ATP-dependent protease ATP-binding subunit ClpL TERM 1350 1114774 - 1114742 - T 76 -3.3 -5.36314 | opp_overlap 1114742 CAAAACATGAAAAAA TCCGTCTTGTGACTA CGT TATACACTTGACGGA CTTTTTTTTAGCGCT SpyM51115 1115502 - 1114759 - | hypothetical protein TERM 1351 1115620 - 1115603 - R 74 -4.1 -5.18726 | TTTCGATAAGAAAAA CACCCTC TACT GAGAATG TTTTAGCATAGATAA engB 1116249 - 1115650 - | GTPase EngB clpX 1117488 - 1116259 - | ATP-dependent protease ATP-binding subunit TERM 1352 1116802 - 1116830 + g 70 -9 -3.1706 | gap 2 CATTTCTTGATTAGG GTGCTTCCGCCCAC CTT GTGGG-GGAA-CAC TTGCTACCGTACCTT SpyM51118 1117788 - 1117618 - | hypothetical protein dfrB 1118305 - 1117808 - | dihydrofolate reductase thyA 1119224 - 1118385 - | thymidylate synthase TERM 1353 1120238 - 1120210 - g 88 -8.3 -4.74453 | opp_overlap 1120211 1120214, overlap 1120211 1120214 GAACACAGGGAAAAA CTAATAGAAGCCT TTC AAGCTTCTATTAC TTATGGCAAACAAAT TERM 1354 1120237 - 1120211 - g 86 -11.8 -3.43587 | opp_overlap 1120211 1120214, overlap 1120210 1120214 AACACAGGGAAAAAC TAATAGAAGCCT TTC AAGCTTCTATTA CTTATGGCAAACAAA TERM 1355 1120211 - 1120237 + G 70 -9.6 -2.57132 | opp_overlap 1120210 1120211 1120214, overlap 1120214 AACACAGGGAAAAAC TAATAGAAGCCT TTC AAGCTTCTATTA CTTATGGCAAACAAA TERM 1356 1120234 - 1120214 - g 79 -9.1 -3.83644 | opp_overlap 1120214 1120211, overlap 1120211 1120210 ACAGGGAAAAACTAA TAGAAGCCT TTC AAGCTTCTA TTACTTATGGCAAAC mvaS 1119433 - 1120608 + | 3-hydroxy-3-methylglutaryl coenzyme A synthase TERM 1357 1120650 - 1120638 - g 71 -4.1 -4.86731 | GTTTTTCAAAGAAAA CATTC GAA GAACG CCTCCAACTTATCGA TERM 1358 1121022 - 1121008 - g 85 -2.8 -5.86976 | overlap 1121013 TCATAAAACAAAAAA GCTAAT TGC ATTGGC AAATAAAGCTTATCC TERM 1359 1121350 - 1121325 - g 90 -8.3 -5.05782 | overlap 1121327 AGTTAGCTCAAAAAA TAGAGCTAGCC AGCC GACTAGCTCAA GTAGATCCTTACCGG TERM 1360 1121348 - 1121327 - g 90 -10.9 -4.15748 | overlap 1121325 TTAGCTCAAAAAATA GAGCTAGCC AGCC GACTAGCTC AAGTAGATCCTTACC mvaA 1120595 - 1121872 + | 3-hydroxy-3-methylglutaryl-coenzyme A reductase TERM 1361 1121892 - 1121935 + T 81 -6.9 -4.63044 | gap 1, opp_overlap 1121892 1121897 1121900, overlap 1121898 AAACAACTAATATAA GG-CAATCACCCATGTAAAC AATTG GTTTACATGGGTGTTTAATC TTTGTTTCTATACAT TERM 1362 1121929 - 1121897 - T 100 -13.6 -3.29549 | opp_overlap 1121892 1121898, overlap 1121892 1121900 ACTAATATAAGGCAA TCACCCATGTAAAC AATTG GTTTACATGGGTGT TTAATCTTTGTTTCT TERM 1363 1121898 - 1121928 + T 100 -17.1 -4.10269 | opp_overlap 1121897 1121892 1121900, overlap 1121892 CTAATATAAGGCAAT CACCCATGTAAAC AATTG GTTTACATGGGTG TTTAATCTTTGTTTC TERM 1364 1121926 - 1121900 - T 100 -13.9 -2.81627 | opp_overlap 1121898 1121892, overlap 1121897 1121892 AATATAAGGCAATCA CCCATGTAAAC AATTG GTTTACATGGG TGTTTAATCTTTGTT fni 1123091 - 1122102 - | isopentenyl pyrophosphate isomerase mvaK2 1124091 - 1123078 - | phosphomevalonate kinase mvaD 1125028 - 1124084 - | mevalonate diphosphate decarboxylase mvaK1 1125888 - 1125010 - | mevalonate kinase TERM 1365 1126115 - 1126099 - R 100 -9.4 -4.946 | opp_overlap 1126102 ATTAAACATTAAAAA CCAGCC TCATG GGCTGG TTAAGCATCGTTTAT SpyM51127 1127414 - 1126182 - | sensor histidine kinase TERM 1366 1127251 - 1127261 + g 70 -5.4 -4.41616 | CTTTCCGTAGTGTCA GGTA ATT TACC TTTATTTGAGGAAAT SpyM51128 1128091 - 1127423 - | response regulator protein SpyM51129 1128744 - 1128094 - | GTP pyrophosphokinase TERM 1367 1128825 - 1128846 + H 91 -11.7 -4.22346 | opp_overlap 1128824 1128823 1128820 1128830 TCTAACTATATAACT GCAAACGAT CTGT ATCGTTTGC TTTTAAATCGCTTTC TERM 1368 1129680 - 1129700 + G 70 -8.3 -3.41757 | opp_overlap 1129679 1129678, overlap 1129679 ATATGCTAAAGAACT GCAAGAACA ACA TGTTCATGC TATTGTGGTTTTAGC TERM 1369 1130500 - 1130514 + G 71 -5 -4.59944 | opp_overlap 1130482, overlap 1130499 1130498 ACAACTACTTACACC GTTGTT GTC AACGAC TTTCTTTATGGTGGT SpyM51130 1128964 - 1130976 + | 5'-nucleotidase fms 1131467 - 1131057 - | peptide deformylase SpyM51132 1131941 - 1131723 - | hypothetical protein TERM 1370 1131994 - 1131950 - R 100 -17.4 -3.80625 | opp_overlap 1131953, overlap 1131953 1131955 GCGCCATAATGTAAA CTACACCCCAAACGTTAGAT AAAAA ATCTAACGTTTGGGGTGTTT TTGCATGACATTAAG TERM 1371 1131991 - 1131953 - R 100 -23.5 -2.98778 | opp_overlap 1131953, overlap 1131950 1131955 CCATAATGTAAACTA CACCCCAAACGTTAGAT AAAAA ATCTAACGTTTGGGGTG TTTTTGCATGACATT TERM 1372 1131953 - 1131991 + r 100 -23.5 -4.67011 | opp_overlap 1131953 1131950 1131955 CCATAATGTAAACTA CACCCCAAACGTTAGAT AAAAA ATCTAACGTTTGGGGTG TTTTTGCATGACATT TERM 1373 1131989 - 1131955 - R 100 -20.3 -3.04183 | opp_overlap 1131953, overlap 1131953 1131950 ATAATGTAAACTACA CCCCAAACGTTAGAT AAAAA ATCTAACGTTTGGGG TGTTTTTGCATGACA TERM 1374 1132059 - 1132046 - R 73 -2.3 -5.42259 | opp_overlap 1132046 TTAGTGCTAAAAAAA CCGAG GGAA CTCCG TTTGAAAGAAGCATC TERM 1375 1132122 - 1132107 - R 100 -3.3 -6.17669 | AAGAAAACAAAAAAA CCATT ACAAAG AATGG ACAAAGACGAGTTCT TERM 1376 1132272 - 1132228 - R 79 -5.1 -5.13722 | opp_overlap 1132234, overlap 1132229 1132234 1132256 CGTATCAAAATAAAA CGAAAAGGACTTAGTCCTCTA CAA CACAGAACTAAATCCTTTACT TCAAATAGAGTAGCC TERM 1377 1132271 - 1132229 - R 78 -8.6 -3.67149 | opp_overlap 1132234, overlap 1132228 1132234 1132256 GTATCAAAATAAAAC GAAAAGGACTTAGTCCTCTA CAA CACAGAACTAAATCCTTTAC TTCAAATAGAGTAGC TERM 1378 1132266 - 1132234 - R 83 -7.1 -4.83677 | opp_overlap 1132234, overlap 1132229 1132228 1132256 AAAATAAAACGAAAA GGACTTAGTCCTCTA CAA CACAGAACTAAATCC TTTACTTCAAATAGA TERM 1379 1132303 - 1132314 + r 73 -5.8 -4.46621 | overlap 1132298 AACTTTTGGGGCTCA GTGC AAGA GCAC TTCTTTTCTATTATC SpyM51133 1134244 - 1132367 - | ABC transporter ATP-binding protein cca 1135449 - 1134241 - | tRNA CCA-pyrophosphorylase TERM 1380 1135408 - 1135436 + g 77 -11.1 -2.91027 | opp_overlap 1135412, overlap 1135401 1135411 1135412 TTTAGTCAATATGGG TAAAGCCTTCTGA AAC TCAGAAGGCATTG TCATTAATTTCATAC TERM 1381 1135411 - 1135433 + g 82 -10.6 -3.58914 | opp_overlap 1135412, overlap 1135408 1135401 1135412 AGTCAATATGGGTAA AGCCTTCTGA AAC TCAGAAGGCA TTGTCATTAATTTCA TERM 1382 1135412 - 1135432 + g 93 -14.1 -2.74625 | opp_overlap 1135412, overlap 1135411 1135408 1135401 GTCAATATGGGTAAA GCCTTCTGA AAC TCAGAAGGC ATTGTCATTAATTTC TERM 1383 1135432 - 1135412 - G 100 -14.1 -3.6106 | opp_overlap 1135412 1135411 1135408 1135401 GTCAATATGGGTAAA GCCTTCTGA AAC TCAGAAGGC ATTGTCATTAATTTC SpyM51135 1136422 - 1135574 - | DegV family protein SpyM51136 1136802 - 1136422 - | hypothetical protein TERM 1384 1136992 - 1136981 - R 76 -2.2 -5.59357 | ATTATATCAAAAAAA CACC CGTT AGTG GTCTTGTACTGCACC TERM 1385 1137410 - 1137429 + r 100 -6.4 -6.04953 | opp_overlap 1137409 CCCCAGTTATACCAC GACCTCTT CTGG ATGAGGTC TTTTTTTATTTGTCT TERM 1386 1138437 - 1138409 - R 93 -6.1 -5.7946 | TTTTTAAGAAAAAAA TCTCAAAGAAATC AGT GATCTCATTAAGA AAGAGTTAACCGAAG TERM 1387 1138780 - 1138754 - R 86 -8.1 -4.48713 | opp_overlap 1138757, overlap 1138750 CGTATCAATAAGAAA GAATACCTTCA ACAGA TGATGGTATTC TAAGGACTAATACTA TERM 1388 1138924 - 1138906 - R 73 -3.2 -5.093 | overlap 1138907 TTTAAAATAAGAAAA TTTTTGAT GGA ATCAAAAG AAATTTATTTGACTA TERM 1389 1139201 - 1139239 + r 74 -4.6 -4.98522 | GCTCAGATTGAATTG CGCCCCAAAAGTTAGA CAAAAAA TCTAATAATTGGGGTG TTTTTGTCTGGCATT TERM 1390 1139627 - 1139595 - R 100 -19.5 -4.74084 | opp_overlap 1139589 1139595 AAAGTAAAACTAAAA GGATTTAGTTCTGTA TTG TACAGAACTAAATCC TTTATTTAAAATAGA TERM 1391 1139595 - 1139627 + r 100 -19.5 -4.44046 | opp_overlap 1139595, overlap 1139589 AAAGTAAAACTAAAA GGATTTAGTTCTGTA TTG TACAGAACTAAATCC TTTATTTAAAATAGA SpyM51144 1140400 - 1139693 - | mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase family protein mur1.1 1141150 - 1140551 - | mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase family protein TERM 1392 1141214 - 1141193 - R 100 -8.1 -5.23316 | opp_overlap 1141193 TAGTATAGCAAAAAA CTAGAACCT TGAC AGATTCTAG TTTTAGTAAGAAAAA fruA 1143189 - 1141243 - | PTS system, fructose-specific IIABC component fruB 1144097 - 1143186 - | putative 1-phosphofructokinase SpyM51148 1144807 - 1144094 - | DeoR family regulatory protein TERM 1393 1145043 - 1145012 - R 100 -9.6 -5.58179 | CAGCATAACAAAAAA CTCAATATTAAAGC TTTA GCCATAATATTGAG TATAACGATTTGATA SpyM51149 1145986 - 1145063 - | 2-dehydropantoate 2-reductase SpyM51150 1147057 - 1145999 - | hypothetical protein TERM 1394 1146454 - 1146432 - G 76 -9.2 -3.76641 | AGCCCAATAGCTAAA CCGATTGCAA CAG TTGAAATCGG ACTAACAATGATAAG SpyM51151 1148227 - 1147235 - | pyridine nucleotide-disulphide oxidoreductase family protein TERM 1395 1147956 - 1147932 - G 72 -4.3 -4.74103 | opp_overlap 1147935 1147937 1147938, overlap 1147933 1147935 GTCCTAATCGAAAAA CCACCTTTAAC CTT GTCAAAGGTTA ATACTTCTTCTTTTA trmD 1148958 - 1148227 - | tRNA (guanine-N(1)-)-methyltransferase TERM 1396 1148670 - 1148649 - G 93 -6.7 -5.40464 | opp_overlap 1148649, overlap 1148666 GACCACAAATAAAAA TTAACTCTT CCTC AAGAGCTAA TTCTTCAGCATAAGC TERM 1397 1148808 - 1148829 + g 91 -9.5 -4.60487 | GGCCCCCACCATAGG GTTCGTCAT CCAC ATGACGAGC TTTTTCAGCATAATC rimM 1149466 - 1148948 - | 16S rRNA-processing protein TERM 1398 1149268 - 1149284 + g 84 -2.3 -5.75822 | opp_overlap 1149269, overlap 1149269 1149280 GATACATGTCTTTAA ATTTGAT GAT ATCAAAG TTTTTTTGCTTTCTA SpyM51154 1150202 - 1149681 - | TetR family regulatory protein SpyM51155 1150338 - 1151213 + | cation efflux family protein TERM 1399 1151277 - 1151331 + T 100 -28.4 -5.12707 | opp_overlap 1151236 1151280 ATTAAGAGCACCTAA TAAGCATACCCCTTTTTACAACATAG TCA CTATGCTGTAAAAAGGGGTATGCTTG TTTTTTAGCGTTTAA TERM 1400 1151328 - 1151280 - T 100 -30.1 -3.70511 | opp_overlap 1151277 AAGAGCACCTAATAA GCATACCCCTTTTTACAACATAG TCA CTATGCTGTAAAAAGGGGTATGC TTGTTTTTTAGCGTT SpyM51156 1151780 - 1151379 - | hypothetical protein SpyM51157 1154826 - 1151800 - | putative surface-anchored protein TERM 1401 1155166 - 1155208 + r 84 -5 -5.28778 | opp_overlap 1155164, overlap 1155164 CCAACAAAAAAGCCT TCCCAAAAGAAGTTCATT AACTGGA AACAAACTACTTTTGGGA TTTTTTATAGATAAT TERM 1402 1155273 - 1155283 + r 74 -4 -5.20216 | opp_overlap 1155273 CCACTGTTTTATAAA GTTA TTC TAAC TTTTTTGATAGTATA TERM 1403 1155442 - 1155407 - R 100 -18 -4.40333 | opp_overlap 1155418, overlap 1155432 TGTAAAGAATATAAA CATTCCTAAAATTAAG TATA CTTAATTTTAGGAATG CCCCCCAAAAAACTG TERM 1404 1155708 - 1155732 + r 100 -15.9 -4.20531 | opp_overlap 1155689 1155708, overlap 1155689 1155686 TTTGCTATTCAAAAA GCTTGTTGACT TTA AGTCAACAAGC TTTTCAATCCATCTC TERM 1405 1155732 - 1155708 - R 100 -15.9 -4.65895 | opp_overlap 1155689 1155686 1155708, overlap 1155689 TTTGCTATTCAAAAA GCTTGTTGACT TTA AGTCAACAAGC TTTTCAATCCATCTC SpyM51158 1155997 - 1155758 - | RNA binding protein rpsP 1156279 - 1156007 - | 30S ribosomal protein S16 TERM 1406 1156358 - 1156404 + r 100 -17 -3.73224 | opp_overlap 1156359 1156366 1156370 1156403, overlap 1156359 1156370 TAAACAGTATAACTC AGTTTAAAGAAAGTGTCAAG TTTTTTT CTTGACACTTTCTTTAAACC TTTAATAAAGACTAC TERM 1407 1156403 - 1156359 - R 100 -20.5 -2.63636 | opp_overlap 1156358 1156359 1156370, overlap 1156366 1156370 AAACAGTATAACTCA GTTTAAAGAAAGTGTCAAG TTTTTTT CTTGACACTTTCTTTAAAC CTTTAATAAAGACTA TERM 1408 1156359 - 1156403 + r 100 -20.5 -2.8372 | opp_overlap 1156359 1156366 1156370, overlap 1156358 1156370 AAACAGTATAACTCA GTTTAAAGAAAGTGTCAAG TTTTTTT CTTGACACTTTCTTTAAAC CTTTAATAAAGACTA TERM 1409 1156396 - 1156366 - R 95 -12.8 -3.62418 | opp_overlap 1156359 1156358 1156370, overlap 1156359 1156370 ATAACTCAGTTTAAA GAAAGTGTCAAG TTTTTTT CTTGACACTTTC TTTAAACCTTTAATA TERM 1410 1156392 - 1156370 - R 82 -7.8 -4.44046 | opp_overlap 1156370 1156359 1156358, overlap 1156366 1156359 CTCAGTTTAAAGAAA GTGTCAAG TTTTTTT CTTGACAC TTTCTTTAAACCTTT TERM 1411 1156370 - 1156392 + r 82 -7.8 -4.4448 | opp_overlap 1156366 1156359 1156370, overlap 1156359 1156358 CTCAGTTTAAAGAAA GTGTCAAG TTTTTTT CTTGACAC TTTCTTTAAACCTTT SpyM51160 1158139 - 1156406 - | putative glycerophosphodiester phosphodiesterase TERM 1412 1158213 - 1158182 - R 73 -8.8 -3.29511 | overlap 1158183 CTCATTGCCTGACAA CTTCCTAGCCGAAC CGAA GTTCAGCTAGAAAT AAGAGATGTATCACT TERM 1413 1158212 - 1158183 - R 82 -12.3 -2.57564 | overlap 1158182 TCATTGCCTGACAAC TTCCTAGCCGAAC CGAA GTTCAGCTAGAAA TAAGAGATGTATCAC SpyM51161 1159613 - 1158393 - | ABC transporter permease SpyM51162 1160311 - 1159625 - | ABC transporter ATP-binding protein SpyM51163 1161606 - 1160335 - | hypothetical protein TERM 1414 1161055 - 1161076 + g 72 -9.5 -2.974 | overlap 1161052 CGCTTTATTTACTTC TGCTTGTGC ATCT GCATAAGCA TCATTTAAATCTTGC TERM 1415 1161801 - 1161776 - R 100 -10.7 -5.55698 | opp_overlap 1161768 1161767 1161776 TATAATCTAAAAAAA TCATTTTTAAG TTTT CTTAAAAATGA TTTTTTTAATTTTTA TERM 1416 1161776 - 1161801 + r 100 -10.7 -5.85011 | opp_overlap 1161776, overlap 1161768 1161767 TATAATCTAAAAAAA TCATTTTTAAG TTTT CTTAAAAATGA TTTTTTTAATTTTTA carB 1164990 - 1161814 - | carbamoyl phosphate synthase large subunit TERM 1417 1164953 - 1164939 - G 73 -7.8 -3.9461 | CTTGTCCAATAATAA TCGGGC CAG ACCCGA TAACCATGATTTTTT carA 1166318 - 1165236 - | carbamoyl phosphate synthase small subunit TERM 1418 1165516 - 1165528 + g 77 -7.7 -4.14472 | opp_overlap 1165509 TGGTTAAAGCCACGA TGACC AAA GGTCA TTTTACAAGTCTTAG pyrB 1167297 - 1166362 - | aspartate carbamoyltransferase catalytic subunit pyrP 1168617 - 1167358 - | uracil permease pyrR 1169154 - 1168633 - | pyrimidine regulatory protein PyrR TERM 1419 1168900 - 1168936 + g 100 -16.8 -2.87881 | opp_overlap 1168895 1168908 1168910, overlap 1168901 1168905 GCCTGTAATATCTAC TGACATGAGAGTTGTG TCTTC CTCAACTCTCATGTCA TCTCTAAAAGGCTTG TERM 1420 1168905 - 1168931 + g 71 -9.5 -2.88999 | opp_overlap 1168895 1168908 1168910, overlap 1168901 1168900 TAATATCTACTGACA TGAGAGTTGTG TCTTC CTCAACTCTCA TGTCATCTCTAAAAG TERM 1421 1169210 - 1169187 - R 100 -8.2 -5.34381 | overlap 1169189 AAATTCAAATAAAAA GATCTCCTTG GAAA CAAGGAGATT CAGCAAAATATAGCA TERM 1422 1169208 - 1169189 - R 90 -10.8 -4.2793 | overlap 1169187 ATTCAAATAAAAAGA TCTCCTTG GAAA CAAGGAGA TTCAGCAAAATATAG TERM 1423 1169237 - 1169247 + r 75 -5.4 -4.76041 | AGCACAATTAAGTAT CATG GTG CATG TTTTTAATCCGTCTC SpyM51169 1170440 - 1169550 - | putative RNA pseudouridylate synthase lsp 1170888 - 1170430 - | lipoprotein signal peptidase TERM 1424 1170718 - 1170703 - G 70 -5.4 -4.35483 | overlap 1170707 1170709 CGTTATGACAACAAA GAACCA TTGC TGGTCC TGCAATATGGAAAAG SpyM51171 1171799 - 1170885 - | LysR family regulatory protein TERM 1425 1171627 - 1171613 - G 78 -4.2 -5.24129 | opp_overlap 1171614 1171616, overlap 1171616 CTTTCTCATAAAAAA CTAGTC CTT GACTTG TCAAGACTGTTCCTG TERM 1426 1172126 - 1172099 - R 100 -8.4 -6.34616 | opp_overlap 1172101, overlap 1172100 1172101 GCAAAATAAAAAAAA TCGGCTTTCCAG ACAC CTGGAAAGCCTT ATATAATGCGATGTT TERM 1427 1172125 - 1172100 - R 100 -11.9 -4.37109 | opp_overlap 1172101, overlap 1172099 1172101 CAAAATAAAAAAAAT CGGCTTTCCAG ACAC CTGGAAAGCCT TATATAATGCGATGT TERM 1428 1172101 - 1172124 + r 100 -15.4 -3.54951 | opp_overlap 1172100 1172099 1172101 AAAATAAAAAAAATC GGCTTTCCAG ACAC CTGGAAAGCC TTATATAATGCGATG TERM 1429 1172124 - 1172101 - R 100 -15.4 -3.18605 | opp_overlap 1172101, overlap 1172100 1172099 AAAATAAAAAAAATC GGCTTTCCAG ACAC CTGGAAAGCC TTATATAATGCGATG rpmA 1172441 - 1172148 - | 50S ribosomal protein L27 SpyM51173 1172795 - 1172469 - | hypothetical protein rplU 1173121 - 1172807 - | 50S ribosomal protein L21 TERM 1430 1173220 - 1173234 + r 78 -8.6 -3.74747 | CGATTTTCGCGCGGT TGCACA GGA TGTGCA TTTAGTCAACGTTAC SpyM51175 1174528 - 1173335 - | hypothetical protein TERM 1431 1173850 - 1173865 + g 71 -4 -4.94703 | overlap 1173851 TCACGTCAGCCTTTT TTTCAG CTAG CTGAAG TTCTTTTTTTATCTT TERM 1432 1174407 - 1174421 + g 87 -5 -5.40072 | overlap 1174393 GGCTGAGCAGATTTT TGAGCT GCT AGCTTA TTTTTTTGAACCCCA TERM 1433 1174611 - 1174598 - R 73 -3.1 -5.15634 | gap 1, opp_overlap 1174598 1174600, overlap 1174599 CATTGCAGCAAAAAA GCC-CT TAT AGAGGC TTTTCAATAGTATCA thiI 1175879 - 1174665 - | thiamine biosynthesis protein ThiI SpyM51177 1177033 - 1175891 - | putative cysteine desulfhydrase TERM 1434 1176914 - 1176904 - G 71 -6.8 -4.11484 | opp_overlap 1176904 GGGAAGCTTCTAAAA TGCG AGA CGCA TTTGTCCCTAATTGG TERM 1435 1177314 - 1177298 - g 70 -2.9 -5.06414 | overlap 1177307 TCCCGTCAACAAAAA CCTCGTA AAT CAGGAGG TGTCCCTACCGAGCA SpyM51178 1177268 - 1177708 + | hypothetical protein folC2 1177738 - 1179006 + | putative folypolyglutamate synthase 2 TERM 1436 1179067 - 1179022 - T 88 -4.9 -5.4833 | gap 1, opp_overlap 1179023, overlap 1179023 TCACCTAACAAAAAA CGATGCTAGCAGTT-TAGAAGA CTT TCCTCAAAAACTGTTAACATCA TTTTTTATTGCCTTA gor 1180446 - 1179094 - | glutathione reductase TERM 1437 1180031 - 1180017 - G 73 -5.7 -4.62302 | CAATATCTGGAAAAA CAGGA TGTCC TCCTG TGGCAATCAAAATAT TERM 1438 1180644 - 1180617 - R 76 -3.5 -5.34055 | gap 1 ATAAACACTAAAAAA CAGATC-CTGAC GAGCT GCCAGCAATCTG TTTTTTTCCTATCTT SpyM51181 1181008 - 1180667 - | hypothetical protein aroC 1182235 - 1181069 - | chorismate synthase TERM 1439 1181358 - 1181369 + g 70 -5.8 -4.41348 | opp_overlap 1181358 1181357 ATGCCACCTTCAAAG CCAC CTAA GTGG TTTGTTTGACGACCA aroD 1183015 - 1182329 - | 3-dehydroquinate dehydratase SpyM51184 1184175 - 1183012 - | hypothetical protein TERM 1440 1184061 - 1184077 + g 100 -5.1 -5.75822 | overlap 1184062 GATTGGACTTGGTCA CCAGTTG AAC CAACTGA TTTTTTTCCTTTATA TERM 1441 1184062 - 1184076 + g 79 -8.6 -4.03053 | overlap 1184061 ATTGGACTTGGTCAC CAGTTG AAC CAACTG ATTTTTTTCCTTTAT TERM 1442 1186335 - 1186320 - g 71 -6.2 -4.23486 | overlap 1186308 AAGCAGTTAAAACAA CTGAAA GATA TTTCAG CAAAACTCGGATCAG SpyM51185 1184283 - 1186493 + | putative sulfatase TERM 1443 1186514 - 1186537 + T 100 -11.2 -5.45652 | opp_overlap 1186517 TTAATGATCTGACTA GAAGCAAAAT AATA ATTTTGCTTC TTTTTTATTGGCGAT TERM 1444 1186703 - 1186669 - T 81 -8.9 -4.14615 | opp_overlap 1186700, overlap 1186672 1186700 ATAAAACATGAGAAA CTACTTTTTATTATA TTGAG TATAATAAAAAGAAG ACGTCCATCGTCTCC TERM 1445 1186700 - 1186672 - T 74 -9.2 -3.07254 | overlap 1186669 AAACATGAGAAACTA CTTTTTATTATA TTGAG TATAATAAAAAG AAGACGTCCATCGTC TERM 1446 1186718 - 1186700 - T 86 -6.7 -5.22006 | opp_overlap 1186700 1186703, overlap 1186669 TGAGTATAATAAAAA GAAGACG TCCAT CGTCTCC TTCATTTTTGTTTCT TERM 1447 1186737 - 1186763 + T 100 -9.7 -5.1287 | opp_overlap 1186740 ATTTTTGTTTCTTTA TAACTTTCTAT AGGTA ATAGAAAGTTA TTTTTTAGGTATAGC rplT 1187143 - 1186784 - | 50S ribosomal protein L20 rpmI 1187399 - 1187202 - | 50S ribosomal protein L35 infC 1187971 - 1187441 - | translation initiation factor IF-3 TERM 1448 1188028 - 1187995 - R 80 -5.9 -4.96848 | overlap 1188000 1188014 1188018 TTTTTTAGAGAAAAA CGAAAGCGGACTTGA TAAA TCAAGCCCGCACACA TAATATTCCATAGGA TERM 1449 1188023 - 1188000 - R 100 -13.2 -4.40526 | overlap 1187995 1188014 1188018 TAGAGAAAAACGAAA GCGGACTTGA TAAA TCAAGCCCGC ACACATAATATTCCA cmk 1188813 - 1188133 - | cytidylate kinase TERM 1450 1188727 - 1188759 + g 70 -9.3 -3.18433 | opp_overlap 1188725 1188728 1188730, overlap 1188726 1188730 AGTATCTAGATAAGT ATAGCCAAGATTTTT TGC AATAATCTTGGCTAC TGTACTTTTTCCACT TERM 1451 1188758 - 1188728 - G 83 -12.8 -2.89793 | opp_overlap 1188727 1188726 1188730, overlap 1188725 1188730 GTATCTAGATAAGTA TAGCCAAGATTTTT TGC AATAATCTTGGCTA CTGTACTTTTTCCAC TERM 1452 1188730 - 1188756 + g 77 -11 -2.78025 | opp_overlap 1188728 1188725 1188730, overlap 1188727 1188726 ATCTAGATAAGTATA GCCAAGATTTTT TGC AATAATCTTGGC TACTGTACTTTTTCC TERM 1453 1188756 - 1188730 - G 78 -11 -2.99717 | opp_overlap 1188730 1188727 1188726, overlap 1188728 1188725 ATCTAGATAAGTATA GCCAAGATTTTT TGC AATAATCTTGGC TACTGTACTTTTTCC SpyM51190 1189325 - 1188828 - | hypothetical protein SpyM51190A 1189374 - 1189571 + | putative ferredoxin TERM 1454 1189554 - 1189575 + T 91 -6.6 -5.32882 | opp_overlap 1189554 TCTTGCCCAACTAAA GCTCTTAC CCTCGA GTAAGGGC TTTTTTATCATGCTG SpyM51191 1190046 - 1189558 - | hypothetical protein pepT 1191310 - 1190087 - | peptidase T TERM 1455 1191352 - 1191390 + r 77 -10.6 -2.91467 | opp_overlap 1191352 AATTATAGCATAAAA GGCTTTAAAATACTTA TTCAAGC TAAGTTTTTTAAAGCC TCTAATTAAGAGTTT TERM 1456 1191390 - 1191352 - R 95 -10.6 -4.5265 | opp_overlap 1191352 AATTATAGCATAAAA GGCTTTAAAATACTTA TTCAAGC TAAGTTTTTTAAAGCC TCTAATTAAGAGTTT SpyM51193 1192888 - 1191404 - | hypothetical protein SpyM51194 1194167 - 1192881 - | putative exopolysaccharide biosynthesis protein SpyM51195 1194501 - 1194160 - | hypothetical protein SpyM51196 1195198 - 1194503 - | putative glycosyl transferase TERM 1457 1194724 - 1194708 - G 76 -6.6 -4.39133 | opp_overlap 1194707 TAATAATTAGCAAAA CGTTCA ATCAA TGAACG GTCAATTAACCTTAG SpyM51197 1197851 - 1195377 - | hypothetical protein TERM 1458 1197707 - 1197695 - G 74 -4.9 -4.77775 | ATCCCACAAAAGAAA CATTT AGT AAATG AGTATAATAGTTTAC SpyM51198 1199593 - 1197848 - | rhamnan synthesis protein F family protein TERM 1459 1198232 - 1198242 + g 74 -4 -5.05153 | AAATGTATCCATAGC TTGA AAA TCAA TTTGTTTTTTAACAT SpyM51199 1200597 - 1199590 - | putative glycosyltransferase SpyM51200 1201827 - 1200622 - | putative polysaccharide export system ATP-binding protein TERM 1460 1201038 - 1201052 + g 70 -2.8 -5.055 | TCAAATCTTTGGCAA TATCAG ATA CAGATA TTTTTTCAGCATTCA SpyM51201 1202630 - 1201827 - | putative polysaccharide export ABC transporter permease protein SpyM51202 1203565 - 1202633 - | alpha-L-Rha alpha-1,3-L-rhamnosyltransferase SpyM51203 1204709 - 1203555 - | putative rhamnosyltransferase TERM 1461 1203677 - 1203701 + g 85 -7.1 -4.90266 | opp_overlap 1203675 AACCTGCATCAACTT GGTCAATCAGC TCT GCTAATTGCCC TTTTTGCTTGGTCCA TERM 1462 1204815 - 1204792 - R 100 -11.8 -4.78764 | opp_overlap 1204792 TAAACCCATGAAAAA GAGTTGGCCT TAGA AAGCCAACTC TTTTTAGAATACTTA TERM 1463 1204792 - 1204815 + r 91 -9.6 -4.64598 | opp_overlap 1204792 TAAACCCATGAAAAA GAGTTGGCCT TAGA AAGCCAACTC TTTTTAGAATACTTA TERM 1464 1205190 - 1205212 + r 75 -10 -2.91695 | overlap 1205187 CCGCTAACTGCTCCA TGGTAAAGAC AAA GTTTTTACCA TAATTTCCAAATACC SpyM51206 1206157 - 1205819 - | hypothetical protein TERM 1465 1206118 - 1206093 - G 72 -8.5 -3.57883 | gap 1, opp_overlap 1206100 ATAACAGTTTCTAAA GCT-TCAAGAAT TCT ATTCTTGATAGC TATCACCTGATCTTG TERM 1466 1206234 - 1206244 + r 77 -8.2 -3.95378 | opp_overlap 1206233 TATTTAGAGGAAATT GCCC TCT GGGC TTGTTTAAGATATCA TERM 1467 1206401 - 1206367 - R 84 -10.8 -3.53031 | opp_overlap 1206368 1206371 1206377, overlap 1206368 1206370 1206377 CTTATTTCAAAGGAA CGACCTAAAATCGTCC ACT GGACGATTTTAGTCCT CTATAAAGTCTCTTA TERM 1468 1206368 - 1206400 + r 84 -12.1 -2.91507 | opp_overlap 1206368 1206367 1206370 1206377, overlap 1206371 1206377 TTATTTCAAAGGAAC GACCTAAAATCGTCC ACT GGACGATTTTAGTCC TCTATAAAGTCTCTT TERM 1469 1206400 - 1206368 - R 95 -14.3 -2.71497 | opp_overlap 1206368 1206371 1206377, overlap 1206367 1206370 1206377 TTATTTCAAAGGAAC GACCTAAAATCGTCC ACT GGACGATTTTAGTCC TCTATAAAGTCTCTT TERM 1470 1206398 - 1206370 - R 90 -13.3 -2.89837 | opp_overlap 1206368 1206371 1206377, overlap 1206368 1206367 1206377 ATTTCAAAGGAACGA CCTAAAATCGTCC ACT GGACGATTTTAGT CCTCTATAAAGTCTC TERM 1471 1206371 - 1206397 + r 100 -16.8 -2.69977 | opp_overlap 1206370 1206368 1206367 1206377, overlap 1206368 1206377 TTTCAAAGGAACGAC CTAAAATCGTCC ACT GGACGATTTTAG TCCTCTATAAAGTCT TERM 1472 1206391 - 1206377 - R 86 -10 -4.24294 | opp_overlap 1206371 1206368 1206377, overlap 1206370 1206368 1206367 AGGAACGACCTAAAA TCGTCC ACT GGACGA TTTTAGTCCTCTATA TERM 1473 1206377 - 1206391 + r 86 -10 -4.34345 | opp_overlap 1206377 1206370 1206368 1206367, overlap 1206371 1206368 AGGAACGACCTAAAA TCGTCC ACT GGACGA TTTTAGTCCTCTATA rpoD 1207503 - 1206394 - | RNA polymerase sigma factor RpoD dnaG 1209326 - 1207512 - | DNA primase TERM 1474 1209765 - 1209752 - g 95 -4.5 -5.75538 | CCTAAAAAAGAAAAA GAAGC TGCA GCTCC TACTCAAGAAGAATT mscL 1209455 - 1209817 + | large-conductance mechanosensitive channel TERM 1475 1209834 - 1209855 + T 83 -5.9 -5.21709 | opp_overlap 1209834 1209837, overlap 1209854 GCGATTTTTGATAAA GTAGTTAGG CATG TCTAACTGC TTTTTTGATATCAAA TERM 1476 1209854 - 1209875 + T 76 -10.3 -2.63902 | opp_overlap 1209834, overlap 1209834 TAGGCATGTCTAACT GCTTTTTTG ATAT CAAAAAAGC TCCCTTGCTTCTTCT TERM 1477 1209927 - 1209907 - T 100 -6.9 -5.8096 | opp_overlap 1209907 GATAAAAAATAAAAA CAGTTCTAA TTG TGAGAACTG TTTTTATTTTTTATC TERM 1478 1209907 - 1209927 + T 100 -6.9 -5.8096 | opp_overlap 1209907 GATAAAAAATAAAAA CAGTTCTAA TTG TGAGAACTG TTTTTATTTTTTATC rpsU 1210120 - 1209944 - | 30S ribosomal protein S21 SpyM51211 1211073 - 1210261 - | extracellular solute-binding protein addA 1214845 - 1211213 - | putative ATP-dependent exonuclease subunit A TERM 1479 1213379 - 1213369 - G 81 -6.8 -4.77157 | TTAAGTGACTAAAAA CAGC ATT GCTG ACATTTAACACCTCT addB 1218057 - 1214842 - | ATP-dependent nuclease subunit B TERM 1480 1217505 - 1217477 - G 80 -6.1 -4.7657 | opp_overlap 1217477 1217480 1217490 GAAAAACGTGAAAAA CCATCAATAACAA CAA CTGTTTTTGATAG TTGGTTATTTAAAAG TERM 1481 1217923 - 1217950 + g 72 -8.6 -3.55071 | opp_overlap 1217922 CAATAAGGTTAAGAC TTCTCTTTCCTT TTCA AATGAAAGAGAA TTTGGAGCAATATAG SpyM51214 1218208 - 1219125 + | putative neutral zinc metallopeptidase TERM 1482 1219192 - 1219168 - T 86 -4.3 -5.65177 | opp_overlap 1219168 ACACTTAGAAAAAAA CCAGACAAG TGCTGTG CTTGTTTGG TTTTTTCTTCTAATA TERM 1483 1219168 - 1219192 + T 100 -7.9 -5.58179 | opp_overlap 1219168 ACACTTAGAAAAAAA CCAGACAAGTG CTG TGCTTGTTTGG TTTTTTCTTCTAATA SpyM51215 1219897 - 1219229 - | ABC transporter ATP-binding protein TERM 1484 1219307 - 1219322 + g 72 -3.2 -5.01858 | overlap 1219309 CCGATCATCATGAGT GACCAT AATA ATGGCC TTGTTTTTTTCTTTA SpyM51216 1220983 - 1219907 - | putative permease SpyM51217 1221442 - 1221056 - | hypothetical protein SpyM51218 1221812 - 1221435 - | hypothetical protein TERM 1485 1221635 - 1221617 - G 85 -8.9 -4.19624 | TAGCCTCAACAGAAA CAGCAAG TGTGT CTTGCTG AAATTGACGATGGTA TERM 1486 1221778 - 1221796 + g 75 -2.5 -5.33405 | gap 1 TTCGAAACCGTGTGG TAA-AGGC GGTT GCCTGTTA TTTTTGTTTGATACA TERM 1487 1221855 - 1221866 + r 81 -4.4 -5.27399 | TTTCTCCAATCATTT GAAC TGGA GTTC TTTTTTCCTCTATTA TERM 1488 1221913 - 1221895 - R 100 -8.8 -5.84432 | opp_overlap 1221895 1221897, overlap 1221897 TATAACAGAAAAAAA CGGAGCCT TAG AGGCTCAG TTTTTTTCTTAGCGT TERM 1489 1221895 - 1221913 + r 100 -8.8 -5.80364 | opp_overlap 1221895 1221897, overlap 1221897 TATAACAGAAAAAAA CGGAGCCT TAG AGGCTCAG TTTTTTTCTTAGCGT TERM 1490 1221911 - 1221897 - R 76 -10 -3.02491 | opp_overlap 1221895 1221897, overlap 1221895 TAACAGAAAAAAACG GAGCCT TAG AGGCTC AGTTTTTTTCTTAGC TERM 1491 1221897 - 1221911 + r 76 -10 -3.0287 | opp_overlap 1221897 1221895, overlap 1221895 TAACAGAAAAAAACG GAGCCT TAG AGGCTC AGTTTTTTTCTTAGC pheT 1224327 - 1221922 - | phenylalanyl-tRNA synthetase subunit beta TERM 1492 1222451 - 1222439 - G 74 -6.3 -4.41616 | opp_overlap 1222438 1222439 AGGTTTGCAAATAAA GTATC CAA GATAC CTTTAGCATGGTAAA TERM 1493 1222961 - 1222933 - G 70 -9 -3.14463 | gap 1, overlap 1222937 AATTTCTTCCACCAA GTCAGCTGGGATA CTAA TATCCCAAC-GAC GCCGAGGAACAGCTA TERM 1494 1222958 - 1222937 - G 70 -9.5 -2.56596 | overlap 1222933 TCTTCCACCAAGTCA GCTGGGATA CTAA TATCCCAAC GACGCCGAGGAACAG pheS 1225580 - 1224537 - | phenylalanyl-tRNA synthetase subunit alpha TERM 1495 1225650 - 1225610 - R 100 -11.1 -5.1675 | TTAGCGATGAAAAAA GCGTGCCACTCCTCCACTT GAT AAGCGGAGCGTTGACACGC GGTACCATCCGTTTT TERM 1496 1226765 - 1226751 - R 100 -10 -4.8667 | opp_overlap 1226751 CAGATGCTATAAAAA GTAGGC TAG GCCTAC TTTCCAGTAAATTTA TERM 1497 1226751 - 1226765 + r 80 -10 -3.62864 | opp_overlap 1226751 CAGATGCTATAAAAA GTAGGC TAG GCCTAC TTTCCAGTAAATTTA epuA 1226950 - 1226762 - | putative competence associated protein murA1 1228225 - 1226954 - | UDP-N-acetylglucosamine 1-carboxyvinyltransferase SpyM51225 1228547 - 1228290 - | hypothetical protein TERM 1498 1228768 - 1228778 + r 70 -5.4 -4.37199 | opp_overlap 1228766 1228768 GCAAACAAAATAATA GGTT AAA AACC TTTCTTACTTATCCT atpC 1229229 - 1228813 - | F0F1 ATP synthase subunit epsilon atpD 1230648 - 1229242 - | F0F1 ATP synthase subunit beta atpG 1231686 - 1230811 - | F0F1 ATP synthase subunit gamma TERM 1499 1231215 - 1231191 - G 72 -4.4 -4.77759 | gap 1, opp_overlap 1231191 1231193 ATAACTCATCAAAAA TCTCATTGACA AACA TGTCAACG-GA TTGTGAAATGATTTG atpA 1233210 - 1231705 - | F0F1 ATP synthase subunit alpha atpH 1233762 - 1233226 - | F0F1 ATP synthase subunit delta atpF 1234256 - 1233762 - | F0F1 ATP synthase subunit B atpB 1234990 - 1234274 - | F0F1 ATP synthase subunit A TERM 1500 1234654 - 1234644 - G 73 -6.8 -4.21098 | opp_overlap 1234644, overlap 1234637 AGAGCAAGGTCAAAA GCCA GAT TGGC TGTTGGCGAGGTCCA atpE 1235222 - 1235025 - | F0F1 ATP synthase subunit C TERM 1501 1235437 - 1235422 - R 73 -5.4 -4.67556 | ACAAGATTCCAAAAA GGGTAT AATA ACACCC CTAAAACATGGCATT TERM 1502 1235496 - 1235474 - R 79 -4.8 -5.20216 | CATATGATCAAAAAA GAGAGACC TCAAATG GGCCCCTC ATATGAATAAATTGA SpyM51234 1236636 - 1235614 - | putative lipid kinase ligA 1238608 - 1236650 - | NAD-dependent DNA ligase LigA TERM 1503 1238782 - 1238761 - R 84 -4.3 -5.57729 | opp_overlap 1238761, overlap 1238766 AAACAACATAAAAAA GAGAAGGGT ATTG ACCCAACTC TTTTGAGTATGATGC SpyM51236 1239302 - 1238802 - | hypothetical protein SpyM51237 1242312 - 1239580 - | endonuclease/exonuclease/phosphatase family protein TERM 1504 1240099 - 1240079 - G 70 -9.7 -2.66316 | opp_overlap 1240084, overlap 1240076 1240084 TGTGCTAGCATATTA GCCAAGACG TGA CGTCTTTGC TCAGATTTAAAAGTG TERM 1505 1240669 - 1240690 + g 74 -3.7 -5.05153 | AGAAGCAATGCTTAA CTTGCTAAG GTCT TTTTGCAAG TTTGTTTTTTCAGGT TERM 1506 1241089 - 1241052 - G 77 -9.9 -3.44848 | overlap 1241050 CTTCTGGATCAAACA CACGCAAGCCATCATTA TCAA TAATATTGGCTGGCGCG ATACGATCTTTCCCT SpyM51238 1242555 - 1242773 + | hypothetical protein TERM 1507 1242839 - 1242801 - T 100 -9.1 -5.00412 | opp_overlap 1242836, overlap 1242835 AAATATAAGCAAAAA GCAACCCTTTTATTG CATATAAGC CAATAAAAGGGCTAC CTGGTAGTTAGCTAA TERM 1508 1242892 - 1242879 - T 73 -5.3 -4.63932 | TATTTTTTAACAAAA GACTA ATTA TAGTC TGGTAGGTTTTAATA sagI 1244003 - 1242885 - | ABC-2 type transporter protein sagH 1245127 - 1244000 - | ABC-2 type transporter protein sagG 1246059 - 1245136 - | ABC transporter ATP-binding protein TERM 1509 1245696 - 1245720 + g 86 -7.3 -5.0538 | opp_overlap 1245700 GGGAGTGTAGCCCCA CAAATTCTAAA CTT TTTAGAACTTG TTTTTTAAGCTGAGC sagF 1246765 - 1246082 - | hypothetical protein sagE 1247433 - 1246762 - | CAAX amino terminal protease family protein TERM 1510 1246928 - 1246917 - GR 73 -2.2 -5.31877 | ACTTAGCATAAAAAA TGGA TTTC CCCA TCAATAAGTGATTTA SpyM51244 1248766 - 1247408 - | streptolysin S biosynthesis protein TERM 1511 1247521 - 1247506 - GR 72 -7.6 -3.67558 | TACACATTTCAAGAA GTTCTG GCAT CAGAAC TCGCGTGACGTACCA sagC 1249844 - 1248786 - | streptolysin S biosynthesis protein sagB 1250791 - 1249841 - | streptolysin S biosynthesis protein TERM 1512 1250867 - 1250821 - R 84 -9.7 -3.74693 | gap 1, opp_overlap 1250831, overlap 1250823 1250825 1250827 1250831 TCTCATTTTACTAAA CATATAGTAATTAGCAGGTACT GTCT AGTACCTGCTAATTACCTGA-G ACGTTAGCATCAAGA TERM 1513 1250866 - 1250823 - R 95 -13.4 -3.4582 | opp_overlap 1250831, overlap 1250821 1250825 1250827 1250831 TCATTTTACTAAACA TATAGTAATTAGCAGGTACT GTCT AGTACCTGCTAATTACCTGA GACGTTAGCATCAAG TERM 1514 1250864 - 1250825 - R 100 -16 -3.29972 | opp_overlap 1250831, overlap 1250823 1250821 1250827 1250831 ATTTTACTAAACATA TAGTAATTAGCAGGTACT GTCT AGTACCTGCTAATTACCT GAGACGTTAGCATCA TERM 1515 1250862 - 1250827 - R 100 -20.8 -3.21269 | opp_overlap 1250831, overlap 1250825 1250823 1250821 1250831 TTTACTAAACATATA GTAATTAGCAGGTACT GTCT AGTACCTGCTAATTAC CTGAGACGTTAGCAT TERM 1516 1250831 - 1250858 + r 100 -15.8 -3.06133 | opp_overlap 1250827 1250825 1250823 1250821 1250831 CTAAACATATAGTAA TTAGCAGGTACT GTCT AGTACCTGCTAA TTACCTGAGACGTTA TERM 1517 1250858 - 1250831 - R 100 -15.8 -3.40082 | opp_overlap 1250831, overlap 1250827 1250825 1250823 1250821 CTAAACATATAGTAA TTAGCAGGTACT GTCT AGTACCTGCTAA TTACCTGAGACGTTA SpyM51247 1251174 - 1251013 - | streptolysin S precursor TERM 1518 1251581 - 1251608 + r 95 -8.5 -5.03145 | opp_overlap 1251581 TACTAAATAAAAAAA CTTTGGTCCTG TATTAT CAGAACCAAAG TTTTTTAACAAGTTG TERM 1519 1251608 - 1251581 - R 100 -10.7 -5.99154 | opp_overlap 1251581 TACTAAATAAAAAAA CTTTGGTCCTG TATTAT CAGAACCAAAG TTTTTTAACAAGTTG TERM 1520 1251612 - 1251628 + r 71 -4.5 -4.83615 | overlap 1251613 TCAGAACCAAAGTTT TTTAACA AGT TGTTAAG TTTTTCTCACGAATC TERM 1521 1251723 - 1251693 - R 100 -14.2 -2.95896 | opp_overlap 1251699, overlap 1251699 TCACTATTTAGAAAT CAAAAAGCTTGGGA TTT TCCCAAGCTTTCTA TTCTTTAACTTTTGC TERM 1522 1251699 - 1251717 + r 100 -13.2 -4.40333 | opp_overlap 1251693 1251699 TTTAGAAATCAAAAA GCTTGGGA TTT TCCCAAGC TTTCTATTCTTTAAC TERM 1523 1251717 - 1251699 - R 100 -13.2 -5.04601 | opp_overlap 1251699, overlap 1251693 TTTAGAAATCAAAAA GCTTGGGA TTT TCCCAAGC TTTCTATTCTTTAAC TERM 1524 1251881 - 1251859 - R 100 -11.4 -5.27023 | opp_overlap 1251859 ACTGCAAAAAGAAAA GACTTGGATA ACA TATCCAAGCC TTCCTCAATAACTTT TERM 1525 1251859 - 1251881 + r 75 -9.2 -3.19656 | opp_overlap 1251859 ACTGCAAAAAGAAAA GACTTGGATA ACA TATCCAAGCC TTCCTCAATAACTTT TERM 1526 1251922 - 1251946 + r 84 -4.4 -5.55698 | opp_overlap 1251929 TACATTAGCTCAGGA TAAATGAGTC CACTA GACTAATTTA TTTTTTTAAGTTATA eno 1253251 - 1251944 - | phosphopyruvate hydratase TERM 1527 1253918 - 1253905 - g 79 -5.3 -5.01732 | opp_overlap 1253912, overlap 1253910 AACCTCCTGAAAAAA CCAAA TCCT TTTGG AAAAGATTTTTGAAA SpyM51249 1253478 - 1253939 + | hypothetical protein TERM 1528 1254061 - 1254043 - T 100 -8.9 -5.17507 | opp_overlap 1254043 AAAAGCTAATAAAAA GTCGTGA GAATA TCACGAC TTTCAAGTATCAAAA TERM 1529 1254043 - 1254061 + T 75 -8.9 -3.63627 | opp_overlap 1254043 AAAAGCTAATAAAAA GTCGTGA GAATA TCACGAC TTTCAAGTATCAAAA ezrA 1255795 - 1254071 - | septation ring formation regulator EzrA TERM 1530 1256094 - 1256106 + r 78 -6.3 -4.77157 | overlap 1256104 ACAAAGCTGTTGGCA TCATG CAT CATGA TTTTTAGTCAATTCG gyrB 1258115 - 1256163 - | DNA gyrase subunit B TERM 1531 1257168 - 1257178 + g 82 -4 -5.42605 | CAAATTGTCCTCATT TTCT TTA AGAA TTTTATTTTTCTTAG SpyM51252 1258685 - 1258116 - | putative haloacid dehalogenase-like hydrolase TERM 1532 1259364 - 1259348 - R 93 -6.6 -5.49569 | opp_overlap 1259348, overlap 1259341 GAGTAATACAAAAAA GCCTTT GATGT AAAGGC TTTTTCAGTGACAAT TERM 1533 1259348 - 1259364 + r 81 -7.3 -4.66163 | opp_overlap 1259348 1259341 GAGTAATACAAAAAA GCCTTTG ATG TAAAGGC TTTTTCAGTGACAAT TERM 1534 1259672 - 1259644 - R 100 -14.9 -2.82635 | opp_overlap 1259644 1259650, overlap 1259650 ATTGTCACGACGACA TAAAAAGACTAGA GAC TCTAGTCTTTTTA TTCTATTACGTTACG TERM 1535 1259644 - 1259672 + r 100 -14.9 -3.71686 | opp_overlap 1259644 1259650, overlap 1259650 ATTGTCACGACGACA TAAAAAGACTAGA GAC TCTAGTCTTTTTA TTCTATTACGTTACG TERM 1536 1259650 - 1259666 + r 100 -9.5 -5.29716 | opp_overlap 1259644 1259650, overlap 1259644 ACGACGACATAAAAA GACTAGA GAC TCTAGTC TTTTTATTCTATTAC TERM 1537 1259666 - 1259650 - R 100 -9.5 -5.01497 | opp_overlap 1259650 1259644, overlap 1259644 ACGACGACATAAAAA GACTAGA GAC TCTAGTC TTTTTATTCTATTAC rplS 1260047 - 1259700 - | 50S ribosomal protein L19 TERM 1538 1260104 - 1260128 + r 86 -9.4 -4.30719 | overlap 1260106 CGGATTAGCCGTAAT TTTCGTGTGT CCATT ACACACGAGA TTTATTCTAACAAAA TERM 1539 1260106 - 1260126 + r 73 -9.8 -2.50545 | overlap 1260104 GATTAGCCGTAATTT TCGTGTGT CCATT ACACACGA GATTTATTCTAACAA SpyM51254 1261424 - 1260162 - | voltage gated chloride channel protein SpyM51255 1261701 - 1261417 - | hypothetical protein TERM 1540 1261859 - 1261840 - R 82 -6.4 -4.92239 | TTAAAAATCTAAAAA TGCCAAGG AAGT CCCTGACA TTTTTACTAAATAGT SpyM51256 1262325 - 1261876 - | flavodoxin TERM 1541 1263095 - 1263083 - g 74 -9.1 -3.49653 | ATTATGTGGACACAA GCGCT TCT AGCGC AAGTGAAATCATTGC TERM 1542 1263581 - 1263602 + G 72 -8.7 -3.53444 | GGGGGCATCCCCTTG CTAGCGGAG CCAA CTCAGCTAG TTTAGAAGAAAATCA SpyM51257 1262719 - 1263660 + | hypothetical protein rpmE2 1263775 - 1264035 + | 50S ribosomal protein L31 type B TERM 1543 1264054 - 1264072 + T 100 -11 -5.46706 | opp_overlap 1264054 AGACAATACAAAAAA CCTTCCTG TAT CAGGAGGG TTTTTCTTTTGGCCT TERM 1544 1264072 - 1264054 - T 100 -8.8 -5.53436 | opp_overlap 1264054 AGACAATACAAAAAA CCTTCCTG TAT CAGGAGGG TTTTTCTTTTGGCCT agaS 1265331 - 1264132 - | putative tagatose-6-phosphate aldose/ketose isomerase TERM 1545 1265244 - 1265201 - G 90 -8.3 -5.00884 | opp_overlap 1265205, overlap 1265205 ACTGCCTTTAAAAAA GAAACTAGGGCTTCTTTTG TTATGT CAAAAGAAGTCATGGTTTC TTGCCACAAAGCTGG TERM 1546 1265205 - 1265240 + g 77 -7.7 -4.15044 | opp_overlap 1265201 1265205 CCTTTAAAAAAGAAA CTAGGGCTTCTTTTG TTATGT CAAAAGAAGTCATGG TTTCTTGCCACAAAG TERM 1547 1265240 - 1265205 - G 72 -3.3 -5.04249 | opp_overlap 1265205, overlap 1265201 CCTTTAAAAAAGAAA CTAGGGCTTCTTTTG TTATGT CAAAAGAAGTCATGG TTTCTTGCCACAAAG SpyM51260 1266073 - 1265351 - | GntR family regulatory protein TERM 1548 1266194 - 1266219 + r 100 -10.6 -5.10029 | opp_overlap 1266194, overlap 1266217 GAAAGAAAACAAAAA GCAAACCTAA TCTTTC TTAGGTTTGC TTTTTTAGCATTAAT TERM 1549 1266219 - 1266194 - R 100 -10.6 -5.67711 | opp_overlap 1266194 1266217 GAAAGAAAACAAAAA GCAAACCTAA TCTTTC TTAGGTTTGC TTTTTTAGCATTAAT adcA 1267777 - 1266230 - | zinc-binding protein AdcA precursor TERM 1550 1267916 - 1267897 - H 100 -10 -5.05782 | opp_overlap 1267897 AGTTATCGTAAAAAA GGCTAAGC AGTT GCTCAGCC TTAGCTTCACTTTTA TERM 1551 1269694 - 1269679 - g 79 -5.4 -4.9138 | ATTATCTAAACAAAA GGCAAG TTTG CTTACC GCTGTTTTACTGTTA SpyM51263 1269659 - 1270417 + | streptococcal phage DNAse TERM 1552 1271190 - 1271176 - g 70 -5.8 -4.45168 | TTTGCAAAATATAAA GATAAT AGA ATTATC AATATGAAGAACTTT speC 1270528 - 1271235 + | exotoxin C precursor TERM 1553 1271249 - 1271280 + T 78 -10.2 -3.31905 | opp_overlap 1271254, overlap 1271254 AATTCATCATACACA AAAAACCGCCCAGA ATAA TCTGAGCGGTTTTG TCTTATCTCGGAGCT TERM 1554 1271275 - 1271254 - T 100 -12.3 -5.43414 | opp_overlap 1271249 1271254 ATCATACACAAAAAA CCGCCCAGA ATAA TCTGAGCGG TTTTGTCTTATCTCG TERM 1555 1271254 - 1271275 + T 100 -10.1 -4.76963 | opp_overlap 1271254, overlap 1271249 ATCATACACAAAAAA CCGCCCAGA ATAA TCTGAGCGG TTTTGTCTTATCTCG SpyM51265 1272508 - 1271303 - | putative phage amidase-like protein SpyM51266 1272851 - 1272624 - | putative phage holin SpyM51267 1273123 - 1272848 - | phage membrane protein TERM 1556 1272884 - 1272902 + g 76 -4.7 -5.02715 | CATATCTTTTAAATC TTTAACA TCATC TGTTAAA TTTTTAATTTGCTCT TERM 1557 1272942 - 1272971 + g 82 -8.6 -4.16943 | gap 1 ATCAACGTTTTATTT TGCTCAGCGTGCT CTTCA AGC-CGCCGAGCA TTTTGGCGTGTAACA SpyM51268 1273750 - 1273133 - | hypothetical protein SpyM51269 1274184 - 1273753 - | hypothetical protein TERM 1558 1273938 - 1273969 + g 77 -5.2 -4.93296 | gap 1 GTAGGTCGTTGAGCT CGTCGAGTTTAGCGG GGT CTGCTA-GCTTGATG TTTTTGTGCTCATCA SpyM51270 1276082 - 1274196 - | hypothetical protein TERM 1559 1274704 - 1274680 - G 74 -6.5 -4.32034 | overlap 1274684 GCATTACTATTAAAA TCCATCTTAGC CGA GCTAAGATCAA TAAGCATAGCGCCAT TERM 1560 1274700 - 1274684 - G 71 -9.5 -2.78495 | overlap 1274680 TACTATTAAAATCCA TCTTAGC CGA GCTAAGA TCAATAAGCATAGCG TERM 1561 1274886 - 1274901 + g 73 -7.6 -3.96624 | ATCAGCCCTAATCTT GATAGC CTCT GCTATC TTTGTGGTAAAGGTG TERM 1562 1275638 - 1275657 + g 73 -9.4 -3.14931 | opp_overlap 1275646 CTCGATACTCACGCC TGATACCA TCAA TGGTATCA TTGATGAGCGCTAGC SpyM51271 1277105 - 1276095 - | putative phage hyaluronidase SpyM51272 1279246 - 1277102 - | hypothetical protein TERM 1563 1278367 - 1278400 + g 100 -6.7 -5.98675 | CCTTAAGGTATTTCT GAGCCAACTTTCTAA TTTC TTCGACTGTTGGCTC TTTTTTATTTTTGTC TERM 1564 1278927 - 1278940 + g 71 -6.7 -4.09243 | GCTCCTACGCTCGCA CCGTT TACA AACGG TTTTAAAGCAATATC SpyM51273 1279950 - 1279243 - | hypothetical protein SpyM51274 1283873 - 1279950 - | putative phage tail protein TERM 1565 1282310 - 1282294 - G 70 -5.8 -4.33956 | gap 1 CCCAAAATAGATAAA GCCGGCC CAGC GGC-GGC TGCAATAAGTCCCCA SpyM51275 1284053 - 1283886 - | hypothetical protein SpyM51276 1284409 - 1284083 - | hypothetical protein TERM 1566 1284344 - 1284358 + g 75 -2.8 -5.1848 | CAACAAATTATCTTC GACATT GAT AAAGTC TTTTTTAAATTCCTT TERM 1567 1284454 - 1284434 - R 100 -8.3 -5.26119 | TTGTCAAAAATAAAA GGTCGCA GCTTAAA TGCGACC TTAAAAATTACATAA SpyM51277 1285070 - 1284462 - | major tail protein TERM 1568 1284610 - 1284628 + g 72 -8.8 -3.50893 | TCCTCTTTTGGTCCG CGGGCAAC AAA GTTACCCG TTGTAGTATCTGGTT SpyM51278 1285511 - 1285086 - | hypothetical protein TERM 1569 1285229 - 1285243 + g 79 -8.6 -4.07687 | ATTTGTTAATTTGGT CAGCTT CTG AAGCTG TTTTGCACCAAAAAT SpyM51279 1285885 - 1285508 - | hypothetical protein SpyM51280 1286229 - 1285882 - | hypothetical protein SpyM51281 1286528 - 1286226 - | hypothetical protein TERM 1570 1286318 - 1286273 - G 95 -11.9 -4.24948 | GGATGATATTTAAAA CGCCATTTGCCAACGGATAGC GAAA ACTATCCGCAGACAAACCGCG ATGGTCATACTCTTC SpyM51282 1286659 - 1286531 - | hypothetical protein SpyM51283 1287860 - 1286673 - | putative phage major capsid protein TERM 1571 1287820 - 1287830 + g 73 -6.8 -4.28115 | opp_overlap 1287803 1287820, overlap 1287800 GCTTGGTTTAAACTA GCGA TAG TCGC TTTAATTTCTTTGAT TERM 1572 1287893 - 1287881 - R 91 -5.5 -5.7946 | opp_overlap 1287881 CCTCCAATAAAAAAA GAGCT TAT AGCCC TTGTAAAATTTCTTC SpyM51284 1288550 - 1287885 - | putative phage ClpP protease SpyM51285 1289748 - 1288528 - | putative phage portal protein TERM 1573 1288779 - 1288794 + g 71 -6.2 -4.14056 | opp_overlap 1288779 1288778 1288781 TATCAAATTCAATAC GATAGA GACG TCTATC TTTATCATTTAACGT SpyM51286 1290006 - 1289782 - | hypothetical protein SpyM51286A 1290169 - 1289999 - | hypothetical protein SpyM51287 1291923 - 1290166 - | putative phage terminase, large subunit TERM 1574 1290552 - 1290572 + g 72 -3.3 -5.0538 | TAATTTCCCAGTCGT TTGAGTAGA CCA TCTCTTCAA TTTTTTCGAGTACAC TERM 1575 1291669 - 1291685 + g 80 -6.5 -4.70659 | CTGGAACATCGCCAA CGGGTAA GGT TTCCCCG TTTTTACATCTGGCA TERM 1576 1291889 - 1291868 - G 93 -8.7 -5.18726 | opp_overlap 1291865 1291868 TTTGCATAATAAAAA GCGTCATCT TTAT AGATGTCGC TGATTGCTGAATAAT SpyM51288 1292154 - 1291924 - | hypothetical protein TERM 1577 1292019 - 1292006 - G 72 -3.1 -5.15634 | TACTCCACTAAAAAA CCATT ATCC AACGG ATTGTTTTGGGCGTC SpyM51289 1292624 - 1292157 - | putative phage terminase, small subunit SpyM51290 1293133 - 1292795 - | putative phage HNH endonuclease TERM 1578 1293516 - 1293501 - g 70 -5.4 -4.35604 | CCAATGCACAATAAA GACCTC GGAA AAGGTC TTGAAGATACCATTC SpyM51292 1293369 - 1293554 + | hypothetical protein SpyM51293 1293606 - 1293983 + | hypothetical protein TERM 1579 1293984 - 1294001 + T 93 -7.7 -5.1101 | opp_overlap 1293984 1293986 1293987, overlap 1293979 AAATTACAAGCATAA GAGCCAC TGTT GTGGTTC TTTTTTACATAATAA TERM 1580 1294120 - 1294104 - T 100 -7.3 -6.17268 | CCATAACAAAAAAAA TCACCAC TAT GTGATGA CTGCCATAAACAGTT SpyM51294 1295039 - 1294110 - | hypothetical protein TERM 1581 1294493 - 1294505 + g 100 -6.3 -6.12458 | ACTGTTGTAACTGTT CTAAC TGT GTTAG TTTTTTATTTTTTTC TERM 1582 1295077 - 1295059 - R 90 -7.4 -5.19328 | opp_overlap 1295059 ACCCCACAATAAAAA GCCACCAC AAT GTGATGAC TAATTGGTTAACCAT SpyM51295 1296059 - 1295622 - | hypothetical protein TERM 1583 1296107 - 1296124 + r 88 -5.5 -5.54907 | GTATTTAATCATGGA GGCGTTC ACAT GGACGTC TTTTTGTTTTGTGGA SpyM51296 1296964 - 1296329 - | hypothetical protein SpyM51297 1297365 - 1296964 - | hypothetical protein SpyM51297A 1297566 - 1297378 - | hypothetical protein SpyM51298 1298038 - 1297556 - | hypothetical protein SpyM51299 1298326 - 1298042 - | putative phage membrane protein SpyM51300 1298736 - 1298323 - | hypothetical protein SpyM51301 1299015 - 1298746 - | hypothetical protein SpyM51302 1299296 - 1299012 - | hypothetical protein SpyM51302A 1299487 - 1299290 - | hypothetical protein SpyM51303 1299986 - 1299474 - | hypothetical protein TERM 1584 1299783 - 1299809 + g 89 -4.5 -5.55664 | gap 1, overlap 1299785 TGAATTTTTTTCAAC TGCGATTG-TGC TAAA GCGGCAATCGTA TTTTTTTAATGCTCG TERM 1585 1299955 - 1299899 - G 91 -13.3 -3.03441 | gap 2, opp_overlap 1299905, overlap 1299901 TATTATGTTTTAAGA CACCACTCTGGAACAGGTCTGAGCCTT TAAAT AAGGCCCAC-CCTGTTCCAGA-TGTTG AGATGTCTAACGATA TERM 1586 1299955 - 1299901 - G 84 -12.4 -3.07344 | opp_overlap 1299905, overlap 1299899 TTATGTTTTAAGACA CCAC-TCTGGAACAGGTCTGAGCCTT TAAAT AAGGCCCAC-CCTGTTCCAGATGTTG AGATGTCTAACGATA TERM 1587 1299905 - 1299950 + g 95 -14.2 -3.08934 | gap 1, opp_overlap 1299899 1299901 GTTTTAAGACACCAC TCTGGAACAGGTCTGAGCCTT TAAAT AAGGCCCAC-CCTGTTCCAGA TGTTGAGATGTCTAA SpyM51304 1300324 - 1299983 - | hypothetical protein SpyM51305 1301298 - 1300501 - | hypothetical protein TERM 1588 1301078 - 1301097 + g 73 -2.2 -5.21709 | gap 1, overlap 1301062 TCAGAGCCGTTTTGG GCTT-TGAA TTC TTCATGAGC TTTTTTACTCTCAAA SpyM51306 1301491 - 1301291 - | hypothetical protein SpyM51307 1302477 - 1301488 - | putative phage RecT family protein SpyM51308 1302809 - 1302477 - | hypothetical protein SpyM51309 1303071 - 1302865 - | hypothetical protein SpyM51310 1303220 - 1303080 - | hypothetical protein SpyM51310A 1303450 - 1303217 - | hypothetical protein SpyM51311 1303817 - 1303431 - | putative phage DNA replication protein SpyM51312 1304215 - 1303976 - | hypothetical protein SpyM51313 1304500 - 1304315 - | hypothetical protein SpyM51313A 1304639 - 1304502 - | hypothetical protein TERM 1589 1304672 - 1304689 + H 100 -7.7 -5.58179 | ATATTTTTGTTCAGA GTCCGAT TGCC GTCGGAC TTTTTTGTTATAATC SpyM51314 1304726 - 1304908 + | putative phage membrane protein TERM 1590 1304940 - 1304964 + T 100 -11.5 -4.72863 | opp_overlap 1304943 TGTTTACATTGAATT GAAGTCTATCC TTT GGATGGGCTTC TTTTAGTTTCTTTAC SpyM51316 1305810 - 1305049 - | putative phage antirepressor protein TERM 1591 1305636 - 1305658 + g 86 -7.6 -5.1244 | TTTGAGTTCCGCCGA GGGTGCCCTG AAT TGGGGCGTCC TTTTTGTCTTCATCG SpyM51317 1306047 - 1305859 - | putative phage repressor protein SpyM51318 1306099 - 1306740 + | hypothetical protein TERM 1592 1306822 - 1306835 + T 84 -4.5 -5.56263 | CTTCCCTCCTTTCCA CTCCT TTTG GGGAG TTTTTATTTTGTAAT SpyM51319 1306997 - 1306839 - | putative phage membrane protein TERM 1593 1307066 - 1307083 + H 82 -11.3 -3.41745 | opp_overlap 1307049 TACCCCGTTAGGGGA GAGGGCT TCTT AGCCCTC TTGATATTGTCACCA TERM 1594 1307120 - 1307169 + H 76 -3.2 -5.28942 | TGTAGTGAACCCTAA GCTTAAAC-CAAAGAATCTTGA TTTCGACT TCTAG-TTCTTTGTGTTTAGGC TTTTTGTTTAGCCTA TERM 1595 1307444 - 1307420 - g 70 -2.8 -5.04249 | overlap 1307421 1307422 TTGCGAAAAAATAAA GGGCTAACTC AGAAA GAGTTAGCGA TCCTAGTTAATATGG TERM 1596 1307442 - 1307422 - g 71 -9.8 -2.75795 | overlap 1307421 1307420 GCGAAAAAATAAAGG GCTAACTC AGAAA GAGTTAGC GATCCTAGTTAATAT TERM 1597 1307596 - 1307580 - g 90 -5.1 -5.53991 | CACCTATTAAAAAAA GTGACAA AAC TAGTCAC GAACTCAAAATCCCT SpyM51320 1307357 - 1308121 + | putative phage repressor protein SpyM51321 1308131 - 1308436 + | putative phage membrane protein TERM 1598 1308479 - 1308442 - f 86 -4.3 -5.63103 | gap 2 GTTTAACTAAAAAAA CCCCACGCTCTCAAAGT TTGGCG ACTCT--GAGCGTGAGG CGAATCTAGTATAGT TERM 1599 1308514 - 1308500 - f 71 -4.2 -4.82667 | opp_overlap 1308498 1308500 CTAGTATAGTAAAAA CCTGCT TTA AGTAGG TCTCTTTACTGTACT TERM 1600 1309084 - 1309070 - g 73 -2.1 -5.34055 | ACAAAGACGAAAAAA CATTG TCGGT CAACG AGTTAGAGGCTGCTA TERM 1601 1309722 - 1309703 - g 83 -3.6 -5.66684 | opp_overlap 1309707, overlap 1309707 TAATCGATAAAAAAA TCAATCGT CTAA ACGATTTA TATATTAATGATTTG TERM 1602 1309850 - 1309836 - g 75 -2.8 -5.24796 | TTTAGACAAGAAAAA CGAAGA CTC TCTTGG AATGCTGATGGATAA SpyM51322 1308559 - 1309974 + | putative phage integrase TERM 1603 1310140 - 1310117 - T 100 -10.4 -5.03994 | overlap 1310098 TTTTAGACAGAAAAA TCGTATGAAC AAAG GCTCATACGA TAAAAATGTTCTATA SpyM51323 1311062 - 1310151 - | hypothetical protein SpyM51324 1312036 - 1311059 - | hypothetical protein SpyM51325 1312923 - 1312033 - | hypothetical protein TERM 1604 1313333 - 1313299 - R 90 -12.5 -3.14931 | opp_overlap 1313299 1313307, overlap 1313307 CTCACTTCTTACCAA TACAAAAAGTTCATA GATGA CATGAACTTTTTGTA TTATTAGGGTCTAAT TERM 1605 1313299 - 1313333 + r 91 -11.8 -3.67112 | opp_overlap 1313299 1313307, overlap 1313307 CTCACTTCTTACCAA TACAAAAAGTTCAT AGATGAC ATGAACTTTTTGTA TTATTAGGGTCTAAT TERM 1606 1313307 - 1313325 + r 73 -3.2 -5.2015 | opp_overlap 1313299 1313307, overlap 1313299 TTACCAATACAAAAA GTTCAT AGATGAC ATGAAC TTTTTGTATTATTAG TERM 1607 1313325 - 1313307 - R 74 -3.9 -5.1244 | opp_overlap 1313307 1313299, overlap 1313299 TTACCAATACAAAAA GTTCATA GATGA CATGAAC TTTTTGTATTATTAG asnC 1314683 - 1313337 - | asparaginyl-tRNA synthetase aspC 1315897 - 1314704 - | aspartate aminotransferase TERM 1608 1315940 - 1315953 + r 81 -5.3 -5.20216 | opp_overlap 1315940 CTTCAGATTAATTAA TGATC AACA GATCA TTTTTTCATAATCTA TERM 1609 1316245 - 1316205 - R 100 -13 -4.74801 | opp_overlap 1316204 1316219, overlap 1316206 TAACGCCATTAAAAA TTTTTCTGATATAATAGA TCCTT TCTATTATATCAGAAAAC AGTCCGTTTCTACTA TERM 1610 1316244 - 1316206 - R 100 -16.5 -3.44158 | opp_overlap 1316204 1316219, overlap 1316205 AACGCCATTAAAAAT TTTTCTGATATAATAGA TCCTT TCTATTATATCAGAAAA CAGTCCGTTTCTACT SpyM51328 1318733 - 1316232 - | bifunctional ATP-dependent DNA helicase/DNA polymerase III subunit epsilon TERM 1611 1317167 - 1317182 + g 72 -4.7 -4.73614 | TACGAGACCAATCAT GAGCA AGCTGG TGCTC TTTATTTTGATAGTA TERM 1612 1317550 - 1317564 + g 79 -4.9 -5.04868 | opp_overlap 1317550, overlap 1317528 AGCTGCTCAAAATAA GCGGC AAAGC GCTGC TTTTGTTTGATTTCG TERM 1613 1318824 - 1318802 - R 100 -15 -5.61913 | opp_overlap 1318799 1318798 1318796 AAGAAATATAAAAAA CACTGTGAGT TTC ACTCACAGTG TCAGTATTAATCATT SpyM51329 1319605 - 1318841 - | acetoin reductase SpyM51330 1319773 - 1320471 + | metallo-beta-lactamase superfamily protein TERM 1614 1320557 - 1320601 + T 100 -14.6 -4.90381 | opp_overlap 1320558 1320560 1320568, overlap 1320558 ACTAAATTTTGAATG ACACCCCAAAAGTTAGAT ACATCAAAC ATCTAACTTTTGGGGTGC TTTTCTTCTCTTGAA TERM 1615 1320600 - 1320558 - T 100 -19.5 -2.74514 | opp_overlap 1320557 1320558, overlap 1320560 1320568 CTAAATTTTGAATGA CACCCCAAAAGTTAGATAC ATCAA ACATCTAACTTTTGGGGTG CTTTTCTTCTCTTGA TERM 1616 1320558 - 1320600 + T 100 -18.1 -3.53144 | opp_overlap 1320558 1320560 1320568, overlap 1320557 CTAAATTTTGAATGA CACCCCAAAAGTTAGAT ACATCAAAC ATCTAACTTTTGGGGTG CTTTTCTTCTCTTGA TERM 1617 1320598 - 1320560 - T 100 -16.3 -2.91467 | opp_overlap 1320558 1320557, overlap 1320558 1320568 AAATTTTGAATGACA CCCCAAAAGTTAGATAC ATCAA ACATCTAACTTTTGGGG TGCTTTTCTTCTCTT ftsX 1321719 - 1320781 - | putative cell division protein ftsE 1322395 - 1321703 - | putative cell division ATP-binding protein TERM 1618 1322023 - 1322041 + g 80 -4.4 -5.21709 | opp_overlap 1322023 1322022 TCAAGCCAACTAAAT CGAGTACC TCT GGCACGCG TTTTTTAATGTGGCG prfB 1323512 - 1322414 - | peptide chain release factor 2 TERM 1619 1323107 - 1323126 + g 71 -7.2 -3.89524 | gap 1, overlap 1323110 ATCTTGCGCTTCAGT TCC-TCCTG AAC CAGGATGGA TTTCTAAGATAGCAT TERM 1620 1323304 - 1323322 + g 71 -6 -4.26079 | opp_overlap 1323303 ATTCTTGCATATTAT GGAAAGTA TCA TACTTACC TTTTAACTCATTTAG SpyM51334 1324756 - 1323581 - | iron-sulfur cluster-binding protein TERM 1621 1324438 - 1324452 + g 70 -2.8 -5.10029 | TAGGTGTAATTTTGC CACGTT TAT AAGGTG TTTTTTGAGGTTGCT SpyM51335 1326057 - 1325401 - | haloacid dehalogenase-like hydrolase TERM 1622 1325530 - 1325541 + g 75 -5.8 -4.74453 | overlap 1325517 ATTGGCTGCTTTAGC GGCA GCAA TGCC TTTTTGGCTGTCTTC TERM 1623 1325656 - 1325673 + g 79 -5.7 -4.94962 | opp_overlap 1325672 ATCTTCACGCGCTAG GATTATT TCAA AATAATC TTTTATTTGCGTTGT TERM 1624 1325707 - 1325672 - G 73 -7 -4.20148 | opp_overlap 1325656 ATTATTTCAAAATAA TCTTTTATTTGCGTTG TCTC CAACGCCAACAAAACA TCCTGACGCTTCGAG kgdA 1326983 - 1326348 - | keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase SpyM51337 1327989 - 1326988 - | 2-dehydro-3-deoxygluconokinase SpyM51338 1328659 - 1328018 - | hypothetical protein TERM 1625 1328620 - 1328633 + g 79 -6.7 -4.50193 | AAATAATACCATTTT TAGCC GCTT GGCTA TTTTCATTAATTAAT idnO 1329478 - 1328684 - | gluconate 5-dehydrogenase TERM 1626 1328790 - 1328776 - G 82 -6.4 -4.87665 | overlap 1328778 CGCTAGCTAGAAAAA CAGCTG GAC CAGCTA AGTCTTCTGTTACCC TERM 1627 1328788 - 1328778 - G 71 -6.8 -4.06182 | overlap 1328776 CTAGCTAGAAAAACA GCTG GAC CAGC TAAGTCTTCTGTTAC SpyM51340 1329814 - 1330251 + | putative N-acetylgalactosamine-specific phosphotransferase system (PTS), IIA component ugl 1330251 - 1331450 + | putative unsaturated glucuronyl hydrolase TERM 1628 1331896 - 1331906 + G 79 -6.8 -4.56597 | opp_overlap 1331904 TTGCCTAGCCCATGA CCAC CAA GTGG TTTTTAACACCAAAA agaV 1331486 - 1331974 + | PTS system, N-acetylgalactosamine-specific IIB component agaW 1331993 - 1332775 + | PTS system, N-acetylgalactosamine-specific IIC component TERM 1629 1332807 - 1332817 + G 73 -6.8 -4.24342 | opp_overlap 1332797 1332805 1332807 GATTACCTCAAAACA GCTC TGA GAGC TTTCTTCCTACAAAA agaD 1332762 - 1333583 + | PTS system, N-acetylgalactosamine-specific IID component TERM 1630 1333593 - 1333644 + F 86 -6.7 -5.07652 | gap 1 GCTTAATGGTTCACA GAGGCCT-GTTATGAGCATAGGGA AATAG TTCCTAAGCACATGATGAGGTCTC TTTTCTTTTGGAAAG SpyM51345 1333670 - 1335577 + | heparinase II/III-like protein SpyM51346 1335641 - 1336636 + | LacI family regulatory protein TERM 1631 1336684 - 1336707 + T 86 -9.7 -4.19472 | opp_overlap 1336684 ACGATTATAAAAAAA GGTTTGAGA CAATTA TCTCAAACC TTTTAGCGTCTATTA TERM 1632 1336707 - 1336684 - T 100 -10.4 -5.67967 | opp_overlap 1336684 ACGATTATAAAAAAA GGTTTGAGAC AATT ATCTCAAACC TTTTAGCGTCTATTA SpyM51347 1339401 - 1336720 - | cation transporting ATPase TERM 1633 1338149 - 1338136 - G 71 -6.7 -3.99678 | ACGGTCAGAATCAAA TGGCA GTTC TGCCA CACGAGGTTCTGCCA TERM 1634 1339414 - 1339452 + r 78 -6.2 -4.87892 | opp_overlap 1339447, overlap 1339416 CAAATTAGTACCTCC TTGGTCTTTTTATTTTAG TTG TTCAAATAAAAAGACCTG TTTATTTTCTTAAAC TERM 1635 1339416 - 1339450 + r 89 -11 -4.04859 | opp_overlap 1339447, overlap 1339414 AATTAGTACCTCCTT GGTCTTTTTATTTTAG TTG TTCAAATAAAAAGACC TGTTTATTTTCTTAA TERM 1636 1339472 - 1339447 - R 95 -7 -5.27335 | opp_overlap 1339416 1339414 1339460 TTGTTCAAATAAAAA GACCTGTTTA TTTTCT TAAACAAGTC TCGCTGTTTAAGATT SpyM51348 1340017 - 1339631 - | hypothetical protein TERM 1637 1340616 - 1340628 + G 77 -4.9 -4.91109 | GTATGGATTACCTTT TAAGA GAT TCTTA TTTTTCTGCTGCCAA TERM 1638 1341087 - 1341109 + G 76 -9.2 -3.75015 | AGTTAGAACGCTTGC GCCAATTGGT CGA ATCAGTTGGC TTTGATCCAGATTAT SpyM51349 1340099 - 1341400 + | putative phosphohydrolase TERM 1639 1341459 - 1341485 + F 78 -5.8 -4.86385 | overlap 1341464 TAGGTGGCACTTATG GCAGCGAGTTCC TTT GGAATTCTATGC TTTATTTTTGAGCCT TERM 1640 1341671 - 1341698 + G 100 -14.4 -4.90266 | opp_overlap 1341673 1341678 TTGCCTCCATTCTAA GATTGAAGAAAG AGTA CTTTCTTCAATC TTTTTAGTTACTACA TERM 1641 1341696 - 1341673 - g 81 -11.2 -3.05844 | opp_overlap 1341671, overlap 1341678 GCCTCCATTCTAAGA TTGAAGAAAG AGTA CTTTCTTCAA TCTTTTTAGTTACTA SpyM51350 1341472 - 1341705 + | hypothetical protein TERM 1642 1342318 - 1342304 - g 83 -7.2 -4.70887 | opp_overlap 1342304 1342304 TGACCAATAAAGAAA TCATCA AAA TGATGA TGATTGATGAACCTG SpyM51351 1341856 - 1342665 + | haloacid dehalogenase-like hydrolase TERM 1643 1343291 - 1343281 - g 79 -3.2 -5.52384 | CCTTGATGAAAAAAA CCGA GAA TCGA AAAGGCATTATCCTT TERM 1644 1343424 - 1343400 - g 95 -3 -6.09888 | gap 2, overlap 1343401 1343402 CCTGAACAAAAAAAA CTCTTGATCCAA CAG TTGGA-CAAG-G CCTTAGCAGAACAAG TERM 1645 1343501 - 1343491 - g 79 -3.2 -5.50313 | CAGAAAATCAAAAAA CCAT TGC ACGG CTACAAAAAGATTTA murM 1342665 - 1343891 + | putative peptidoglycan pentaglycine interpeptide biosynthesis protein TERM 1646 1344313 - 1344302 - g 73 -5.8 -4.58663 | opp_overlap 1344302 ATGACGGTTTAAAAA CAGG CTAT CCTG AGGGTGAACCTGTTT TERM 1647 1344915 - 1344901 - g 70 -8.6 -3.41051 | CCAGCTCTATTACAA GAGCAT GCT ATGCTC AAGGCAATTCACAAG murN 1343878 - 1345113 + | putative peptidoglycan branched peptide synthesis protein TERM 1648 1345217 - 1345159 - T 80 -10.8 -3.25942 | gap 1, opp_overlap 1345166 1345179, overlap 1345166 1345179 ATTCTCTCATATTAA GAGTTAAGCCATCTAAAAAAGAAAAGG ATTTAA CCTTTTCTTTTTTAGATGACTTAGTT- AAGGAAATCAAGCAA TERM 1649 1345211 - 1345166 - T 100 -20.2 -3.21062 | opp_overlap 1345166 1345179, overlap 1345159 1345179 CATATTAAGAGTTAA GCCATCTAAAAAAGAAAAGG ATTTAA CCTTTTCTTTTTTAGATGAC TTAGTTAAGGAAATC TERM 1650 1345166 - 1345211 + T 100 -18 -3.34013 | opp_overlap 1345166 1345159 1345179, overlap 1345179 CATATTAAGAGTTAA GCCATCTAAAAAAGAAAAGG ATTTAA CCTTTTCTTTTTTAGATGAC TTAGTTAAGGAAATC TERM 1651 1345179 - 1345198 + T 86 -6.5 -5.10497 | opp_overlap 1345166 1345159 1345179, overlap 1345166 AAGCCATCTAAAAAA GAAAAGG ATTTAA CCTTTTC TTTTTTAGATGACTT TERM 1652 1345198 - 1345179 - T 86 -6.5 -5.10497 | opp_overlap 1345179 1345166, overlap 1345166 1345159 AAGCCATCTAAAAAA GAAAAGG ATTTAA CCTTTTC TTTTTTAGATGACTT tpiA 1345970 - 1345212 - | triosephosphate isomerase TERM 1653 1346154 - 1346138 - R 100 -10.8 -4.87807 | opp_overlap 1346138 TTAAGATAGCAAAAA GCCCCC GAATT GGGGGC TTCTTCAAACTTAAG TERM 1654 1346138 - 1346154 + r 91 -11.5 -3.65314 | opp_overlap 1346138 TTAAGATAGCAAAAA GCCCCCG AAT TGGGGGC TTCTTCAAACTTAAG tuf 1347406 - 1346210 - | elongation factor Tu SpyM51356 1347603 - 1347743 + | hypothetical protein TERM 1655 1347725 - 1347759 + T 100 -19 -3.69338 | opp_overlap 1347735, overlap 1347735 AACTGGGATTGTCTA TATTCTAAAATCTCCT TAA AGGAGATTTTAGAATA TTATTGAAATTGCTT TERM 1656 1347735 - 1347749 + T 83 -8.6 -4.21314 | opp_overlap 1347735, overlap 1347725 GTCTATATTCTAAAA TCTCCT TAA AGGAGA TTTTAGAATATTATT TERM 1657 1347749 - 1347735 - T 81 -8.6 -4.16943 | opp_overlap 1347735 1347725 GTCTATATTCTAAAA TCTCCT TAA AGGAGA TTTTAGAATATTATT ftsW 1349064 - 1347760 - | putative cell division protein TERM 1658 1348322 - 1348304 - G 80 -2.4 -5.5943 | overlap 1348305 AAAGGATTAAAAAAA GCACTAAA ACG TTTAGCGA CATAGCCAAAAACAG ppc 1351966 - 1349204 - | phosphoenolpyruvate carboxylase TERM 1659 1353683 - 1353695 + G 70 -9.1 -3.1876 | CAGCTCTTACCTGGA TGCGC CAA GCGCA TTACTACATGGGCTT SpyM51359 1352161 - 1353960 + | putative oligopeptidase SpyM51360 1353953 - 1354432 + | putative glutathione peroxidase TERM 1660 1354430 - 1354471 + T 100 -22.1 -2.8742 | opp_overlap 1354435 1354440, overlap 1354433 1354440 AAAGCACTTCTTGGT TAATACAAAATAGACTTGG CGTG CCAAGTCTATTTTGTATTA TAGTTACTATTTAAA TERM 1661 1354433 - 1354468 + T 100 -19.4 -3.57161 | opp_overlap 1354435 1354440, overlap 1354430 1354440 GCACTTCTTGGTTAA TACAAAATAGACTTGG CGTG CCAAGTCTATTTTGTA TTATAGTTACTATTT TERM 1662 1354466 - 1354435 - T 100 -17.6 -3.01791 | opp_overlap 1354433 1354430 1354440, overlap 1354440 ACTTCTTGGTTAATA CAAAATAGACTTGG CGTG CCAAGTCTATTTTG TATTATAGTTACTAT TERM 1663 1354461 - 1354440 - T 95 -11.7 -4.66537 | opp_overlap 1354433 1354430 1354440, overlap 1354435 TTGGTTAATACAAAA TAGACTTGG CGTG CCAAGTCTA TTTTGTATTATAGTT TERM 1664 1354440 - 1354461 + T 100 -11.7 -4.76193 | opp_overlap 1354440 1354435, overlap 1354433 1354430 TTGGTTAATACAAAA TAGACTTGG CGTG CCAAGTCTA TTTTGTATTATAGTT SpyM51361 1354861 - 1354478 - | hypothetical protein SpyM51362 1355348 - 1354845 - | hypothetical protein TERM 1665 1355135 - 1355125 - G 73 -5.4 -4.6265 | AGAACAAGCACAAAA CAAG TAA CTTG CCAAAAGACCCAAGG SpyM51363 1355673 - 1356521 + | N-acetylmuramoyl-L-alanine amidase TERM 1666 1356524 - 1356543 + F 86 -4.3 -5.75599 | opp_overlap 1356524 CTCCAACAATTAAGA GGTTAGC ATCATG GCTAATC TTTTTTTATAGTTTA TERM 1667 1356617 - 1356597 - f 86 -8.3 -4.36127 | opp_overlap 1356597 1356602, overlap 1356615 GTCAATAATTTAAAA CCCCTTATC CTT GACAAGGAG ATTATCTCATCATAT TERM 1668 1356762 - 1356783 + F 100 -8.1 -5.36441 | opp_overlap 1356760 GATTGGAAAGCGATA CTCTTTTTG TGCA CAAAAGGAG TTTTTTATGTCACCA SpyM51364 1356790 - 1357353 + | hypothetical protein TERM 1669 1357409 - 1357386 - f 88 -5.4 -5.58454 | opp_overlap 1357386 CTTACATTAAAAAAA TGGTATAATA ATGT TGTTATACCA TTTTTTTATGTTTAG TERM 1670 1357386 - 1357409 + F 100 -7.6 -5.88197 | opp_overlap 1357386 CTTACATTAAAAAAA TGGTATAATA ATGT TGTTATACCA TTTTTTTATGTTTAG SpyM51365 1357444 - 1357923 + | hypothetical protein SpyM51366 1358263 - 1358886 + | phosphoglycerate mutase family protein SpyM51367 1359897 - 1358995 - | haloacid dehalogenase-like hydrolase TERM 1671 1360421 - 1360398 - g 79 -5.2 -5.07107 | GAAATCTTCAAAAAA GCCGATTTAG GCGA CTTTATCGGC GTTGAAGGCGAAGTC TERM 1672 1361154 - 1361142 - g 77 -6.3 -4.62069 | GTCCCACTCGAAAAA CACTT CAC AAGTG TCGGACATATCATCA lysS 1360071 - 1361564 + | lysyl-tRNA synthetase TERM 1673 1361637 - 1361662 + F 100 -14.9 -4.16842 | opp_overlap 1361640 TTTTATTATCTCTAA CCAGTCTTCAT TACC ATGAAGACTGG TTTATTAACAGTAGC TERM 1674 1361659 - 1361640 - f 72 -9.4 -2.72661 | opp_overlap 1361637 TATTATCTCTAACCA GTCTTCAT TACC ATGAAGAC TGGTTTATTAACAGT SpyM51369 1361700 - 1361840 + | hypothetical protein SpyM51370 1362149 - 1361937 - | hypothetical protein TERM 1675 1362186 - 1362210 + r 93 -6.6 -5.64274 | opp_overlap 1362186 CTATTCGAAATTAAA GTGGAAAAAA TCATC TTTTTTTCAC TTTTTTTATGACTCA TERM 1676 1362343 - 1362291 - R 100 -7.3 -5.77853 | gap 2, opp_overlap 1362293 1362312, overlap 1362293 AACTTTCAAAAAAAA CAGGCTCTCTTTTCCCAACTATGGT CGTAT ACCAT--TTGGAAAAAGAGGGCCTC TAGTATTTCTTGTTA TERM 1677 1362341 - 1362293 - R 91 -9.9 -4.52949 | gap 2, opp_overlap 1362293 1362312, overlap 1362291 CTTTCAAAAAAAACA GGCTCTCTTTTCCCAACTATGGT CGTAT ACCAT--TTGGAAAAAGAGGGCC TCTAGTATTTCTTGT TERM 1678 1362293 - 1362341 + r 76 -9.9 -3.02508 | gap 2, opp_overlap 1362293 1362291, overlap 1362312 CTTTCAAAAAAAACA GGCTCTCTTTTCCCAACTATGGT CGTAT ACCAT--TTGGAAAAAGAGGGCC TCTAGTATTTCTTGT SpyM51371 1363645 - 1362359 - | putative peptidase SpyM51372 1364673 - 1363747 - | putative peptidase SpyM51373 1364872 - 1365156 + | hypothetical protein TERM 1679 1365224 - 1365209 - T 100 -3.3 -6.20267 | CCAAAAACAAAAAAA GATTG AAGCCA CAATC CCCCCTTCTTCAGTT SpyM51374 1365743 - 1365315 - | hypothetical protein TERM 1680 1365434 - 1365448 + g 77 -5 -5.00616 | TCGCTTCAACTTCGG CAAAGG TTT CTTTTG TTTTTTGCACGAAAG TERM 1681 1365625 - 1365635 + g 73 -5.4 -4.57341 | GGACTTTCTTTGTAG GCTT GAT AAGC TTTTTCAGCACGATT SpyM51375 1366143 - 1365736 - | hypothetical protein lgt 1366944 - 1366165 - | prolipoprotein diacylglyceryl transferase hprK 1367873 - 1366941 - | HPr kinase/phosphorylase TERM 1682 1368153 - 1368118 - R 95 -8.4 -4.7629 | overlap 1368125 TTACTAAGTCAAAAA GCAAAAAGCCTCATCA TAGC TGATAAGACCCTTCGC TTACTTACATATCAA TERM 1683 1368146 - 1368125 - R 83 -5.9 -5.18355 | overlap 1368118 GTCAAAAAGCAAAAA GCCTCATCA TAGC TGATAAGAC CCTTCGCTTACTTAC SpyM51378 1368510 - 1368238 - | hypothetical protein TERM 1684 1368568 - 1368583 + r 79 -3.2 -5.47821 | opp_overlap 1368563 1368568 1368569, overlap 1368569 TTTCGCAAAATAAAA CCAGTC TTAC GACTGA TTTTTTTCAATAAGT TERM 1685 1368583 - 1368568 - R 81 -5.4 -5.07652 | opp_overlap 1368568 1368569, overlap 1368563 1368569 TTTCGCAAAATAAAA CCAGTC TTAC GACTGA TTTTTTTCAATAAGT TERM 1686 1368651 - 1368680 + r 75 -10.1 -2.84687 | opp_overlap 1368660, overlap 1368660 TGATACGCCTTTTTC GTTGATAAACCTG CCCA CAGGTTTGGCAAC TATAATGATGATTAG TERM 1687 1368900 - 1368880 - R 73 -6.9 -4.11394 | ATCCTAGGGTTAAAA TCCAAATGA CCA TCTTTTGGA AAAAAGCGACCGCCA SpyM51380 1371129 - 1368997 - | putative transcription accessory protein SpyM51381 1371363 - 1371518 + | hypothetical protein TERM 1688 1371606 - 1371638 + F 70 -5.6 -4.50976 | gap 1, opp_overlap 1371603, overlap 1371608 1371609 1371611 TAACAAAACGTATCA GTCGAGGCTG-AACA TTCG TGTTTCAGCCTCCTC TTTTATCATCTAGAA TERM 1689 1371609 - 1371635 + F 77 -10.3 -2.91099 | gap 1, opp_overlap 1371603, overlap 1371608 1371606 1371611 CAAAACGTATCAGTC GAGGCTG-AACA TTCG TGTTTCAGCCTC CTCTTTTATCATCTA TERM 1690 1371699 - 1371714 + G 71 -4 -5.00642 | overlap 1371691 1371701 CTTCCTCCCAGTGTC TTGCAA TGGT TTGCGA TTTTTATGTCCATTA SpyM51382 1371666 - 1372568 + | putative permease SpyM51383 1372568 - 1373383 + | hypothetical protein TERM 1691 1373398 - 1373424 + T 82 -6.7 -4.89729 | opp_overlap 1373398 AAGACTAATAAAAAA GCACTTGTTTT TTATC AAAACAAATGC TTTTTGAGTTTTATC TERM 1692 1373424 - 1373398 - T 100 -8.9 -5.54885 | opp_overlap 1373398 AAGACTAATAAAAAA GCACTTGTTTT TTATC AAAACAAATGC TTTTTGAGTTTTATC bglA 1374906 - 1373482 - | 6-phospho-beta-glucosidase TERM 1693 1374324 - 1374334 + g 76 -2.4 -5.38839 | CTTGGTATAAATCTT GCAG GCT CAGC TTTTCTTTTTCTGTC SpyM51385 1376787 - 1374925 - | PTS system, beta-glucoside-specific IIABC component TERM 1694 1375177 - 1375189 + g 86 -7.7 -5.00616 | ATGAATCAAGACTTC CACAC CAC GTGTG TTTTTTAAGGCAACA TERM 1695 1375723 - 1375745 + g 73 -5.5 -4.65032 | opp_overlap 1375720 CAAAGCTGAAATCCC CGCGGCAAG GGCAA CTTGACGTG TTTGTTTCTGCTTTG TERM 1696 1376702 - 1376724 + g 80 -10.6 -3.31416 | opp_overlap 1376713, overlap 1376697 AGTACTAAGCGTAGA CGTGTTACAC AGT GTGTCACACG TTGAATATTTGTTTT licT 1377631 - 1376789 - | transcription antiterminator TERM 1697 1378016 - 1377996 - g 85 -8.3 -4.43397 | overlap 1377997 TTTCAAAACAAACAA TTATGGCGA TTA TCGCCATAG CACTCATTGGTTTTT TERM 1698 1378015 - 1377997 - g 83 -11.8 -3.24954 | overlap 1377996 TTCAAAACAAACAAT TATGGCGA TTA TCGCCATA GCACTCATTGGTTTT TERM 1699 1378210 - 1378220 + G 72 -4.6 -4.81249 | ACCCCTCTTTTTTAT GGCC ACA GGTC TTTTTACATTTGGCA SpyM51387 1377959 - 1379326 + | major facilitator superfamily protein TERM 1700 1379343 - 1379370 + T 100 -15 -4.90906 | opp_overlap 1379343 ATGACATACTAAAAA CCAGTCTCGTTT TATT GAACGAGACTGG TTTTTGCTGTTATAA TERM 1701 1379370 - 1379343 - T 100 -14.3 -4.85129 | opp_overlap 1379343 ATGACATACTAAAAA CCAGTCTCGTT TTATTG AACGAGACTGG TTTTTGCTGTTATAA ftsY 1380930 - 1379380 - | putative cell division protein FtsY TERM 1702 1380272 - 1380288 + g 79 -5.1 -5.17744 | overlap 1380274 CCAGTCCGCGTTTTT TTCAAGC TAC GCTTGTA TTTTTCTTGATCTGT TERM 1703 1380274 - 1380286 + g 77 -7.7 -4.20491 | overlap 1380272 AGTCCGCGTTTTTTT CAAGC TAC GCTTG TATTTTTCTTGATCT TERM 1704 1380820 - 1380842 + g 76 -7.1 -4.14627 | overlap 1380815 1380821 TTGCTCATTGGCTTT TTCAGAAAG CTCCT CTTTCTGAG TTGTTTCTGTCAAAA SpyM51389 1381754 - 1380930 - | haloacid dehalogenase-like hydrolase SpyM51390 1382555 - 1381758 - | putative haloacid dehalogenase-like hydrolase TERM 1705 1381817 - 1381843 + g 80 -11 -3.38281 | overlap 1381811 1381820 AGTGGCCAATGACTT GGTCTGAAATCA CTT TGATTTCAGGTC TTGCATTTTCCGTAG TERM 1706 1381820 - 1381840 + g 79 -11.3 -2.54586 | overlap 1381817 1381811 GGCCAATGACTTGGT CTGAAATCA CTT TGATTTCAG GTCTTGCATTTTCCG TERM 1707 1382735 - 1382706 - H 80 -5.8 -5.03314 | TCCATTCGTAAAAAA CAGCCAGATTAT ATTTCG ATAACCTGACCG TTTTTGAAGTGAACT SpyM51392 1382860 - 1383135 + | putative transposase TERM 1708 1383168 - 1383192 + F 83 -8.6 -4.24204 | opp_overlap 1383170 CGGTTACGCTTTGAA CACGCCACAA CAACC TTGTGTCGTG TTTTACGTGTCAATC TERM 1709 1383328 - 1383313 - g 72 -3.3 -5.04868 | CCAAAGCAAACAAAA GACTT GGTGTG AAGTC TATCAAGGTCATTCT SpyM51393 1383183 - 1383986 + | putative transposase TERM 1710 1384227 - 1384195 - T 90 -8.7 -4.44187 | gap 1, opp_overlap 1384195 ATAGACAAACAGAAA TACTCCGT-TTCTA GTTTCA TAGAAGACGGAGTA TTTTTTAGTAGAGAC TERM 1711 1384195 - 1384227 + T 100 -8.7 -5.14563 | gap 1, opp_overlap 1384195 ATAGACAAACAGAAA TACTCCGT-TTCTA GTTTCA TAGAAGACGGAGTA TTTTTTAGTAGAGAC TERM 1712 1384470 - 1384480 + T 78 -4 -5.31158 | TCGAATATAATTCAT GTTT AAA AAAC TTTTTGATTTTTTTA TERM 1713 1384943 - 1384961 + T 76 -6.1 -4.6575 | overlap 1384951 GTTCCATATTTATTT TGTCTTT TTCAT AAAGACA TTTTATGATTTCTAT SpyM51397 1386607 - 1385588 - | putative microcin immunity protein TERM 1714 1388201 - 1388190 - R 70 -3 -5.10064 | opp_overlap 1388190 GTTAACACATAAAAA TGAT GTTC ATCA TTATATTCCAATGAA TERM 1715 1389050 - 1389024 - R 100 -10.3 -4.98911 | TACCATAAAAATAAA TTTATCGCTCG TTCTT CAAGCGATAAA ACAAGCGATAAACTA TERM 1716 1389382 - 1389360 - R 79 -3.3 -5.4387 | AGATAAACTAAAAAA GGACGTGCC GAATT GATACGCCC TTGCCTTTTATCAAT SpyM51403 1389725 - 1389393 - | hypothetical protein TERM 1717 1390266 - 1390249 - R 93 -7.7 -5.24129 | opp_overlap 1390249 TTGGGGTACAAAAAA GCACCTC CTTT GAAGTGC TTTCGGTATATTTCT SpyM51405 1390595 - 1390323 - | hypothetical protein SpyM51406 1390919 - 1390614 - | putative plasmid stabilization system protein protein SpyM51407 1391221 - 1390919 - | putative plasmid stabilization system protein antitoxin protein SpyM51408 1391267 - 1392361 + | hypothetical protein SpyM51409 1392361 - 1392585 + | hypothetical protein SpyM51410 1392576 - 1393304 + | hypothetical protein TERM 1718 1393346 - 1393320 - f 100 -11.7 -5.30199 | AAAAATCAACAAAAA CTCCAACTTAG AAATA CTAAGCTGGAG TTAGAAAGCAGTCTT SpyM51413 1394224 - 1394433 + | putative DNA-binding protein TERM 1719 1394445 - 1394486 + T 74 -9.6 -3.03151 | opp_overlap 1394445, overlap 1394444 CTAGAAATAAAAAAA GCACTAAGTTGATAAGAT GTGTAA GTCAGATCAACTTAGTGC CTTTACTTTGAAAAA TERM 1720 1394486 - 1394445 - T 100 -8.9 -6.02919 | opp_overlap 1394445 1394444 CTAGAAATAAAAAAA GCACTAAGTTGATAAGA TGTGTAAG TCAGATCAACTTAGTGC CTTTACTTTGAAAAA TERM 1721 1395344 - 1395354 + T 72 -4 -5.07107 | AATGAATTAAGTTGT GATA TAC TATC TTTTTTAACAATTTC TERM 1722 1395417 - 1395404 - T 70 -3.1 -4.9218 | GATGGACTAGAAAAA GCACT CATA AATGC CAAGATAACATTAGT SpyM51415 1396985 - 1395828 - | UDP-glucose 6-dehydrogenase SpyM51416 1397275 - 1397009 - | hypothetical protein TERM 1723 1397347 - 1397357 + r 88 -5.4 -5.61596 | CATCTTCGATTGCAG TCCT ACT AGGA TTTTTTTCTAACCAT SpyM51417 1398666 - 1397677 - | glycosyltransferase SpyM51418 1399680 - 1398721 - | hypothetical protein SpyM51419 1400872 - 1399673 - | S-adenosylmethionine synthetase SpyM51420 1401868 - 1400882 - | hypothetical protein SpyM51421 1402595 - 1401861 - | hypothetical protein SpyM51422 1403433 - 1402597 - | hypothetical protein aroE.2 1404356 - 1403430 - | shikimate 5-dehydrogenase TERM 1724 1404383 - 1404403 + H 80 -11.3 -3.12668 | opp_overlap 1404383 1404401 AACCATTACCTATAA GTCTTTAGA GTA TCTAAAGAC TTAGGTGTACACCTA TERM 1725 1404403 - 1404383 - H 82 -11.3 -3.3854 | opp_overlap 1404383, overlap 1404401 AACCATTACCTATAA GTCTTTAGA GTA TCTAAAGAC TTAGGTGTACACCTA TERM 1726 1404420 - 1404403 - H 70 -8.5 -3.43109 | opp_overlap 1404403, overlap 1404401 TAGAGTATCTAAAGA CTTAGGT GTAC ACCTAAG TAACTTACCCACCAA TERM 1727 1404506 - 1404551 + H 70 -3.5 -5.06414 | overlap 1404510 CTTCATAAGTGGACT TCCTTTCAGTTTTTATTTATT GTAC AATAAAAAAAAACGGAATTGA TTTTTGTTGGGAAAG TERM 1728 1404510 - 1404547 + H 71 -7.3 -3.9407 | overlap 1404506 ATAAGTGGACTTCCT TTCAGTTTTTATTTATT GTAC AATAAAAAAAAACGGAA TTGATTTTTGTTGGG SpyM51424 1404577 - 1405428 + | putative regulatory protein TERM 1729 1405533 - 1405558 + T 100 -12 -4.60949 | opp_overlap 1405533 ATCGACAGCTAAAAA GCCTTGGAAA CTGCTA TTTCCAAGGC TTTCTTTGTACTCTA TERM 1730 1405558 - 1405533 - T 100 -12.7 -4.71061 | opp_overlap 1405533 ATCGACAGCTAAAAA GCCTTGGAAAC TGCT ATTTCCAAGGC TTTCTTTGTACTCTA TERM 1731 1405658 - 1405676 + T 100 -8.9 -5.30155 | opp_overlap 1405658 GAACATCCAAAAAAA CAGAAGG AACTC CCTTCTG TTTTTTAATTGGTCA TERM 1732 1405676 - 1405658 - T 100 -9.6 -5.52909 | opp_overlap 1405658 GAACATCCAAAAAAA CAGAAGGA ACT CCCTTCTG TTTTTTAATTGGTCA smc 1409220 - 1405681 - | putative chromosome partition protein TERM 1733 1407508 - 1407520 + g 100 -5.5 -5.78622 | AGGTAAAAAAGTTGC TCGTC CTT GGCGA TTTTTTTTCAAATAA rnc 1409913 - 1409221 - | ribonuclease III TERM 1734 1409991 - 1409964 - R 100 -10 -4.82667 | opp_overlap 1409964 TTAGTATACCAAAAA TCCACCTAGAAA ACCG TCTCTAAGTGGA TTTTTCGTGATTTAT TERM 1735 1409964 - 1409991 + r 75 -5.6 -4.85267 | opp_overlap 1409964 TTAGTATACCAAAAA TCCACCTAGAAA ACCG TCTCTAAGTGGA TTTTTCGTGATTTAT TERM 1736 1410113 - 1410055 - R 79 -7 -4.53034 | opp_overlap 1410056 1410057, overlap 1410057 CTCATACAATCAAAA GACTCTACACTATCTGAGG-GGAATT TCCCACTAC AGTCCCACCACAGATAGTGTAGAG-C TATTTTGTTTTTAGT TERM 1737 1410056 - 1410113 + r 75 -7.2 -4.26857 | gap 1, opp_overlap 1410055 1410057, overlap 1410057 TCATACAATCAAAAG ACTCTACACTATCTGAGG-GGAATT TCCCACTAC AGTCCCACCACAGATAGTGTAGAGC TATTTTGTTTTTAGT TERM 1738 1410057 - 1410112 + r 79 -10.7 -3.13674 | gap 1, opp_overlap 1410055 1410057, overlap 1410056 CATACAATCAAAAGA CTCTACACTATCTGAGG-GGAATT TCCCACTAC AGTCCCACCACAGATAGTGTAGAG CTATTTTGTTTTTAG TERM 1739 1410112 - 1410057 - R 88 -10.7 -3.86903 | gap 1, opp_overlap 1410057 1410056, overlap 1410055 CATACAATCAAAAGA CTCTACACTATCTGAGG-GGAATT TCCCACTAC AGTCCCACCACAGATAGTGTAGAG CTATTTTGTTTTTAG TERM 1740 1410294 - 1410326 + r 73 -9.2 -2.87362 | opp_overlap 1410294, overlap 1410293 1410296 TAAGACATCAAAAAA TAGCCCTGACTGGT ATATC ACCAATCAGCGCTA CTTTGCATATTCTCT TERM 1741 1410326 - 1410294 - R 100 -12.1 -5.27399 | opp_overlap 1410294 1410293 1410296 TAAGACATCAAAAAA TAGCCCTGACTGGTA TAT CACCAATCAGCGCTA CTTTGCATATTCTCT vicX 1411165 - 1410356 - | metallo-beta-lactamase superfamily protein covS 1412521 - 1411169 - | sensor histidine kinase TERM 1742 1411199 - 1411210 + g 72 -4.4 -4.72272 | CTCCCATTCTTCATA GATG GCTG CATC TTTTTCATAAGGCAA TERM 1743 1411256 - 1411228 - G 76 -6.8 -4.3208 | overlap 1411231 1411233 TTTCATAAGGCAAAA CAATAGTAAAGG TCGAT CCTTTACCATAG TCACTCTTAGCCCAG TERM 1744 1411253 - 1411231 - G 76 -7.1 -4.27465 | overlap 1411228 1411233 CATAAGGCAAAACAA TAGTAAAGG TCGAT CCTTTACCA TAGTCACTCTTAGCC TERM 1745 1412230 - 1412240 + g 87 -3.2 -5.7946 | overlap 1412229 TATAAGCCAAAATAC TTGC CAA GCGA TTTTTTTCTTGGGCA covR 1413224 - 1412514 - | response regulator protein SpyM51430 1414381 - 1413386 - | hypothetical protein TERM 1746 1413920 - 1413891 - G 100 -13.7 -4.06419 | opp_overlap 1413879 TGCCGCCACAAACAA GGCCCTTTTTTAG ACCT CAAAAAAAGGGCC AGAGCTTGGGCGTCT SpyM51431 1415723 - 1414476 - | hypothetical protein TERM 1747 1415165 - 1415175 + gr 91 -6.8 -5.27477 | opp_overlap 1415165 TCGGTAAAAGGTAAA GGTG ACT CACC TTTTTTGCTTGCCAT TERM 1748 1415665 - 1415675 + gr 93 -5.4 -5.63517 | AAGCTTATCTGATCG GCTA CGA TAGC TTTTTTATTTGGGCA SpyM51432 1416828 - 1415680 - | putative thiolase TERM 1749 1415774 - 1415790 + gr 70 -8.7 -3.09327 | opp_overlap 1415789, overlap 1415788 AACCCTTGGCCACCA GCTGCTG CTA TAGCAGC TATTCCATAGCGTCC SpyM51433 1417366 - 1416797 - | hypothetical protein TERM 1750 1417456 - 1417500 + r 71 -8.7 -3.1489 | opp_overlap 1417469, overlap 1417469 AAAGAACACTTCTTA GCCACCAAAAAAAGTTGAGTC CTA GACCCAACTTTTTTTGGTTCA TTACATCATATTTAA TERM 1751 1417487 - 1417469 - R 100 -9.6 -5.53991 | opp_overlap 1417456 1417469 TAGCCACCAAAAAAA GTTGAGTC CTA GACCCAAC TTTTTTTGGTTCATT TERM 1752 1417469 - 1417487 + r 100 -7.4 -5.66868 | opp_overlap 1417469, overlap 1417456 TAGCCACCAAAAAAA GTTGAGTC CTA GACCCAAC TTTTTTTGGTTCATT glpF2 1418211 - 1417501 - | glycerol uptake facilitator protein 2 SpyM51435 1418603 - 1418229 - | sugar phosphotransferase system (PTS), fructose family IIA protein SpyM51436 1419178 - 1418603 - | dihydroxyacetone kinase family protein SpyM51437 1420178 - 1419189 - | dihydroxyacetone kinase family protein TERM 1753 1420263 - 1420240 - H 100 -14 -3.36823 | opp_overlap 1420240, overlap 1420222 1420235 CCTCCCAAAACGTAA GGGACAAATC CTCA GATTTGTCCC TTTTCTTTCTAAAAT TERM 1754 1420240 - 1420263 + H 100 -14 -4.99645 | opp_overlap 1420222 1420240 1420235 CCTCCCAAAACGTAA GGGACAAATC CTCA GATTTGTCCC TTTTCTTTCTAAAAT SpyM51438 1420330 - 1420866 + | hypothetical protein SpyM51439 1420881 - 1421870 + | dihydroxyacetone kinase family protein TERM 1755 1421909 - 1421885 - T 100 -8.6 -5.33785 | opp_overlap 1421885 AACCATCACAAAAAA GGCAGCCATT TTTAC AACAGCTGCC TTCCTTCATTATCTA SpyM51440 1422759 - 1421974 - | ABC transporter permease SpyM51441 1423579 - 1422761 - | hypothetical protein SpyM51442 1424573 - 1423581 - | ABC transporter ATP-binding protein TERM 1756 1424528 - 1424538 + g 78 -2.6 -5.42259 | CTGGCTCTTTAATGG TTTT GGA AAAA TTTTTTTGAAGGTGG TERM 1757 1424706 - 1424677 - R 70 -6.5 -4.1673 | overlap 1424683 TAATTTTTTAAGAAA GAAAAAGAAGCCC ATAA GGACCTCTTTTTG CCATTGATTAAGCTT TERM 1758 1424700 - 1424683 - R 88 -5.5 -5.47159 | overlap 1424677 TTTAAGAAAGAAAAA GAAGCCC ATAA GGACCTC TTTTTGCCATTGATT thrS 1426657 - 1424714 - | threonyl-tRNA synthetase TERM 1759 1426861 - 1426834 - R 100 -10.6 -6.09196 | TCCAAAACAAAAAAA CTGACCGCATCC CAAA GGACGCAATCAG CGTGGTTCCACCTTA SpyM51444 1428413 - 1427079 - | 1,2-diacylglycerol 3-glucosyltransferase SpyM51445 1429413 - 1428415 - | putative glycosyltransferase TERM 1760 1429459 - 1429486 + r 83 -11.4 -3.01791 | opp_overlap 1429465, overlap 1429465 TTTCACTAAGACATG CAAAAATCAGCC TTAG GGCTGATTTTAG TATTGAAAAAACAGT TERM 1761 1429465 - 1429480 + r 90 -9 -4.4261 | opp_overlap 1429465, overlap 1429459 TAAGACATGCAAAAA TCAGCC TTAG GGCTGA TTTTAGTATTGAAAA TERM 1762 1429480 - 1429465 - R 100 -9 -4.74453 | opp_overlap 1429465 1429459 TAAGACATGCAAAAA TCAGCC TTAG GGCTGA TTTTAGTATTGAAAA alsA 1430545 - 1429544 - | catabolite control protein A TERM 1763 1430664 - 1430679 + H 78 -4 -5.40474 | AAACATTAACTCGAA GCTTGA TTTT TTAAGC TTTTTTTGAAAAAAT pepQ 1430719 - 1431804 + | putative Xaa-Pro dipeptidase SpyM51448 1431853 - 1432518 + | NAD(P)H-dependent quinone reductase gloA 1432529 - 1432906 + | putative lactoylglutathione lyase TERM 1764 1432916 - 1432941 + F 100 -14.9 -5.42198 | opp_overlap 1432916 1432919 AACTAATACTATTAA CAACAGAAGCT TTAA AGCTTCTGTTG TTTTATTTTTTAACC TERM 1765 1432941 - 1432916 - f 100 -14.9 -3.29038 | opp_overlap 1432916, overlap 1432919 AACTAATACTATTAA CAACAGAAGCT TTAA AGCTTCTGTTG TTTTATTTTTTAACC TERM 1766 1432938 - 1432919 - f 88 -10.8 -3.77553 | opp_overlap 1432916, overlap 1432916 TAATACTATTAACAA CAGAAGCT TTAA AGCTTCTG TTGTTTTATTTTTTA csbB 1433051 - 1433977 + | putative glucosyl transferase SpyM51451 1434188 - 1434871 + | hypothetical protein SpyM51452 1434871 - 1435797 + | hypothetical protein pcp 1435847 - 1436494 + | pyrrolidone-carboxylate peptidase TERM 1767 1436526 - 1436546 + T 100 -4 -6.26417 | opp_overlap 1436526 CCTATTTAAAAAAAA CAGAGATA TGAAC TAACTCTG TTTTTTTTTGTGCTA TERM 1768 1436546 - 1436526 - T 90 -4 -5.81412 | opp_overlap 1436526 CCTATTTAAAAAAAA CAGAGATA TGAAC TAACTCTG TTTTTTTTTGTGCTA TERM 1769 1436600 - 1436566 - T 81 -7.2 -4.56597 | opp_overlap 1436567 1436571, overlap 1436567 TTTTTGTGCTAAAAA TGAAAGACCTAGGGAA ACT TTTCATAGGTCTTTCT CAATTGTCATCTTAA TERM 1770 1436567 - 1436599 + T 85 -12.9 -2.63234 | opp_overlap 1436566 1436567, overlap 1436571 TTTTGTGCTAAAAAT GAAAGACCTAGGGAA ACT TTTCATAGGTCTTTC TCAATTGTCATCTTA TERM 1771 1436599 - 1436567 - T 80 -10.7 -3.33744 | opp_overlap 1436567 1436571, overlap 1436566 TTTTGTGCTAAAAAT GAAAGACCTAGGGAA ACT TTTCATAGGTCTTTC TCAATTGTCATCTTA TERM 1772 1436571 - 1436595 + T 76 -7.9 -4.00468 | opp_overlap 1436567 1436566, overlap 1436567 GTGCTAAAAATGAAA GACCTAGGGAA ACT TTTCATAGGTC TTTCTCAATTGTCAT SpyM51454 1437331 - 1436612 - | putative glutamine cyclotransferase TERM 1773 1436765 - 1436777 + g 74 -9.1 -3.55563 | opp_overlap 1436765 AGGACTAATATCATA GGTGG CTA CCACC TTTCCAGAATCAGGT TERM 1774 1437304 - 1437288 - G 71 -6.6 -4.05004 | opp_overlap 1437287 1437282 CTATCATAAGAATAA GTTCGT AACAA ACGAAC CTGTCCTTTAGTTAT smpB 1437804 - 1437337 - | SsrA-binding protein rnr 1440140 - 1437807 - | putative exoribonuclease R TERM 1775 1439927 - 1439939 + g 87 -3.4 -5.79595 | CACGAAAAACACCCT GAAC AGTAG GTTC TTTTTTCTTTTCACG TERM 1776 1440011 - 1440025 + g 76 -7.2 -4.26076 | overlap 1440008 ACAGGCTCTGACTTT CCATTT TGG AAATGG TTTTAATAAGGCTGG TERM 1777 1440229 - 1440203 - R 93 -6.6 -5.60993 | opp_overlap 1440202 TCGCTGATAAAAAAA TGAGCTAGAC TAACTCT GTCAAGCTCA CTCCTTATTTACTTG secG 1440470 - 1440234 - | preprotein translocase subunit SecG rpmG 1440662 - 1440516 - | 50S ribosomal protein L33 pmrA 1441852 - 1440659 - | multi-drug resistance efflux pump TERM 1778 1441825 - 1441793 - G 70 -5.6 -4.37734 | CATAACAAGTGAAAA GCTTGCCCCAGTAA AGAAG TTACCAAGCCAAGC CACTTTTAGATTTTG SpyM51459 1443476 - 1441974 - | ATPase coaE 1444259 - 1443666 - | dephospho-CoA kinase fpg 1445083 - 1444256 - | formamidopyrimidine-DNA glycosylase TERM 1779 1444423 - 1444439 + g 77 -7.9 -4.30014 | opp_overlap 1444422 CATTACGGTAAGTAC GGACGGT CGA ACCGCCC TTTTCAATTCCTAAA SpyM51462 1446121 - 1445255 - | putative DNA-binding protein SpyM51463 1446398 - 1446670 + | hypothetical protein SpyM51464 1447193 - 1447462 + | hypothetical protein TERM 1780 1447479 - 1447503 + T 100 -15.1 -5.06451 | opp_overlap 1447477 TCTCCTAAAATCAGT GGACACTACCG TTT CGGTAGTGTTC TTTTTTAAGCTAATC SpyM51466 1449365 - 1448301 - | hypothetical protein TERM 1781 1448611 - 1448627 + g 81 -5.8 -5.08824 | overlap 1448602 TGATCGGCTTCAGTA GGCTCT TTTAC GGAGCC TTTTTTCCATAAAAC TERM 1782 1449262 - 1449250 - G 77 -7.7 -4.19953 | TAGCCAACTCCAAAA CGTCT ATC AGACG AATGGACTGAATCTG TERM 1783 1449474 - 1449440 - R 100 -8.8 -5.46657 | opp_overlap 1449439 1449440 TAGTCTAACAAAAAA CTCGTAATTCTATATA AAT CATATAAAATGACGAG CTTTGGCAAAGATGA SpyM51467 1450023 - 1449622 - | hypothetical protein SpyM51468 1450498 - 1450202 - | hypothetical protein SpyM51469 1450742 - 1450548 - | hypothetical protein SpyM51470 1451236 - 1451036 - | putative bacteriocin associated protein SpyM51471 1451545 - 1451249 - | putative bacteriocin SpyM51474 1452853 - 1452671 - | putative bacteriocin subunit SpyM51475 1453113 - 1452868 - | putative bacteriocin subunit SpyM51476 1453511 - 1453765 + | hypothetical protein TERM 1784 1453945 - 1453925 - T 72 -4.1 -4.90525 | overlap 1453927 CAATTGGAAAGAAAA TCCTGTTAA CAT TTAACAAAA TTATTCAGACTTAAT TERM 1785 1453999 - 1453984 - T 100 -9 -5.63103 | TTGGAAGCAAAAAAA GAGAGC ATAA GCTCTC GAAACATCGTCTTTC SpyM51477 1454547 - 1454071 - | MutT/NUDIX family protein era 1455463 - 1454567 - | GTP-binding protein Era dgk 1455990 - 1455583 - | diacylglycerol kinase TERM 1786 1455674 - 1455663 - G 70 -5.8 -4.40993 | opp_overlap 1455673 CAGAAATCATCAAAA CAGC ACCT GCTG CCATATCCTTGGCAT TERM 1787 1455673 - 1455688 + g 72 -4.7 -4.66609 | opp_overlap 1455663 CAAAACAGCACCTGC TGCCA TATCCT TGGCA TTTTTAGCTAGCATA TERM 1788 1455719 - 1455709 - G 73 -5.4 -4.57755 | AGCTAGCATAGAAAA GTGA TAG TCAC TAGCCAAATCAACTA TERM 1789 1455812 - 1455802 - G 73 -5.4 -4.56187 | TAGAAGTAAAAATAA CCAT TCG ATGG CTGAAATGCTAAAAA SpyM51480 1456468 - 1455971 - | putative metalloprotease SpyM51481 1457202 - 1456627 - | uracil DNA glycosylase superfamily protein SpyM51482 1458300 - 1457248 - | PhoH-like protein TERM 1790 1458081 - 1458053 - G 71 -6.7 -4.12532 | TCTGCCATAGATAAA GCTGTCACCACAT CTG ATGTGTTGACCAC CATGCCACGACCCAC TERM 1791 1458438 - 1458415 - R 100 -10.4 -5.243 | opp_overlap 1458415 TAAATCATCAAAAAA GCTGATAAGC CTAA ACTTATCAGC TTTAACTACTCTAAG TERM 1792 1458415 - 1458438 + r 84 -9.7 -3.70149 | opp_overlap 1458415 TAAATCATCAAAAAA GCTGATAAG CCTAAA CTTATCAGC TTTAACTACTCTAAG SpyM51483 1460231 - 1458459 - | myosin-crossreactive antigen TERM 1793 1458494 - 1458508 + g 85 -2.8 -5.71712 | overlap 1458492 TGAGCAATTCTTCGA TAAAGG TAT CCTTGA TTTTTTTATGTCCGA TERM 1794 1460526 - 1460509 - R 89 -7.7 -5.06103 | opp_overlap 1460509 AGAATTGTCAAAAAA CTCACGC CTAA ACGTGAG TTTTTTTTGATAGCA TERM 1795 1460509 - 1460526 + r 100 -7 -5.86061 | opp_overlap 1460509 AGAATTGTCAAAAAA CTCACG CCTAAA CGTGAG TTTTTTTTGATAGCA SpyM51484 1461703 - 1460546 - | hypothetical protein TERM 1796 1460985 - 1460995 + g 70 -3.2 -4.91109 | overlap 1460968 1460967 TGTGCTGCTGGCGCA GAGG TTT CTTC TTTTTCTGCTGGGGC TERM 1797 1461829 - 1461843 + r 91 -6.4 -5.252 | opp_overlap 1461819 1461829 GATAACCCTTCAAAA GAGTCG ATA TGACTC TTTTTTATCCACGTA SpyM51485 1462074 - 1461859 - | hypothetical protein msrA 1462580 - 1462071 - | methionine sulfoxide reductase A TERM 1798 1462251 - 1462261 + g 81 -5.4 -5.0707 | CAAGTTTGCTTTTGA TTGC TCT GCAA TTTCTTTTTGTCTTT TERM 1799 1462629 - 1462649 + r 72 -3.9 -4.98436 | opp_overlap 1462631, overlap 1462630 1462631 TTCATTGTAACAAAA AACTTTGCC AGT GGCAAAGCA TTTTTATCCTATTAA TERM 1800 1462647 - 1462631 - R 100 -10.9 -5.46657 | opp_overlap 1462630 1462629 1462631 CATTGTAACAAAAAA CTTTGCC AGT GGCAAAG CATTTTTATCCTATT TERM 1801 1462631 - 1462647 + r 78 -10.9 -2.73702 | opp_overlap 1462631, overlap 1462630 1462629 CATTGTAACAAAAAA CTTTGCC AGT GGCAAAG CATTTTTATCCTATT SpyM51487 1463510 - 1462653 - | hypothetical protein frr 1464176 - 1463619 - | ribosome recycling factor pyrH 1464933 - 1464205 - | uridylate kinase TERM 1802 1465204 - 1465180 - R 89 -5.8 -5.42265 | TTAAACCATAAAAAA GACAAACCTC TAGTG AAGATTTGTC TTCAGAAATTTGTCT TERM 1803 1465231 - 1465246 + r 88 -3.3 -5.80364 | GTCTTTTTGCTATGA TTAGG CGATGC CCTAA TTTTTTTCTTAAAGT rplA 1465944 - 1465255 - | 50S ribosomal protein L1 TERM 1804 1465908 - 1465926 + g 71 -5.3 -4.5187 | TGCTATCTACTTTTT CAAGTGC AGCAC GCATTTG TTTGCTTTTTTTAGC rplK 1466475 - 1466050 - | 50S ribosomal protein L11 TERM 1805 1466220 - 1466261 + g 71 -6.5 -4.30844 | overlap 1466223 TACCTGATCCTTTTT CAACACCTGCAGCTTTTTT CAAA AGAACAGCAGCTGGTGGTG TTTTAGTGATGAAAT TERM 1806 1467026 - 1467068 + r 100 -18 -3.02698 | opp_overlap 1467031, overlap 1467031 GGCCTGACATCACAA AAAAAGAACCTGACATCTCA TCA TGAGACGTCAGGTTCTTTTA GTTTGTCTGCAATAC TERM 1807 1467031 - 1467063 + r 100 -17.9 -4.65153 | opp_overlap 1467031, overlap 1467026 GACATCACAAAAAAA GAACCTGACATCTCA TCA TGAGACGTCAGGTTC TTTTAGTTTGTCTGC TERM 1808 1467063 - 1467031 - R 100 -20.1 -5.69473 | opp_overlap 1467031 1467026 GACATCACAAAAAAA GAACCTGACATCTCA TCA TGAGACGTCAGGTTC TTTTAGTTTGTCTGC SpyM51493 1469471 - 1467066 - | DNA translocase FtsK SpyM51494 1469688 - 1470494 + | putative cyclophilin type peptidyl-prolyl cis-trans isomerase TERM 1809 1470594 - 1470583 - T 76 -2.2 -5.43414 | ATGACATATAAAAAA CACC CTTT GATG TCATTTGCCACTATT mtsC 1471496 - 1470642 - | metal cation ABC transporter membrane protein mtsB 1472222 - 1471497 - | metal cation ABC transporter ATP-binding protein TERM 1810 1472277 - 1472247 - R 80 -6.2 -5.05113 | TTTACATAAATAAAA CAAAGCACAACACT AAA ATCGCTGTGCTTTA TTGTTATCTTATTTT mtsA 1473218 - 1472286 - | metal ABC transporter substrate-binding lipoprotein precursor TERM 1811 1472867 - 1472880 + g 83 -5.3 -5.25735 | opp_overlap 1472852 TGCCATCAGACACGG CAAAG TAAT CTTTG TTTTTCGTTTTTTGA TERM 1812 1473580 - 1473606 + G 71 -3.7 -4.90266 | CTTGTTGCTAACCTC TACCGCAAACA CCGCT TGATTGAGGTA TTTTTGATTCATCAG scaR 1473364 - 1474011 + | metal-dependent transcriptional regulator TERM 1813 1474033 - 1474070 + T 100 -24.5 -5.40474 | opp_overlap 1474033 GCGTCTCCTCAAAAA GAGGCCACACTCATTTA AATT TAAATGAGTGTGGCCTC TTTTTTTGAGGGGCT TERM 1814 1474070 - 1474033 - T 100 -24.5 -4.56597 | opp_overlap 1474033 GCGTCTCCTCAAAAA GAGGCCACACTCATTTA AATT TAAATGAGTGTGGCCTC TTTTTTTGAGGGGCT SpyM51499 1474451 - 1474110 - | hypothetical protein mtn 1475297 - 1474602 - | 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase SpyM51501 1475568 - 1475317 - | hypothetical protein SpyM51502 1476122 - 1475568 - | putative ADP-ribose pyrophosphatase gcaD 1477535 - 1476153 - | bifunctional GlmU protein TERM 1815 1476447 - 1476463 + g 70 -2.9 -5.02476 | GTTTCCAATATAAGT CAGATGC CCA GCCTTTG TTTTTTCACCAATGT TERM 1816 1476805 - 1476824 + g 86 -12.2 -3.41302 | overlap 1476803 ACCATATGTTTTTGG GTGATGCG TTGG CGCATCAC TGTTTCAGCTGTTGC TERM 1817 1477443 - 1477430 - G 81 -6.7 -4.79223 | opp_overlap 1477429 TTACACTACGAAAAA CATGC TCAA GCATG GTTAGTCCAGATACT TERM 1818 1477688 - 1477663 - R 70 -2.7 -5.1861 | gap 1, opp_overlap 1477652 1477663 GTGATGACTAAAAAA GACAGGACTT CAGCAAT AAGTC-TGTC TTTCTTAGGCATTTG SpyM51504 1479046 - 1477709 - | putative glycerol-3-phosphate transporter TERM 1819 1479316 - 1479293 - R 100 -8.1 -5.14965 | opp_overlap 1479312, overlap 1479294 ATTTTTACCAAAAAA GCACGAGGG GATTCA CCCTCGTGA AAACACGTCTTTCAA TERM 1820 1479315 - 1479294 - R 91 -11.6 -3.68256 | opp_overlap 1479312, overlap 1479293 TTTTTACCAAAAAAG CACGAGGG GATTCA CCCTCGTG AAAACACGTCTTTCA SpyM51505 1480338 - 1479379 - | NAD-dependent oxidoreductase fabG 1481112 - 1480414 - | 3-ketoacyl-(acyl-carrier-protein) reductase SpyM51507 1481341 - 1481105 - | hypothetical protein SpyM51508 1481704 - 1482204 + | hypothetical protein TERM 1821 1482231 - 1482271 + T 83 -12 -2.75064 | opp_overlap 1482234 1482243, overlap 1482228 1482243 GCTATGAGGTTGGCT AAAGCACAAAAAGCACCT GTCAG GGGTGCTTTTTGTGCTGC TGATTGCGTGCAAAG TERM 1822 1482268 - 1482234 - T 100 -17.4 -3.5393 | opp_overlap 1482231 1482228 1482243, overlap 1482243 ATGAGGTTGGCTAAA GCACAAAAAGCACC TGTCAGG GGTGCTTTTTGTGC TGCTGATTGCGTGCA TERM 1823 1482259 - 1482243 - T 76 -5.1 -5.04325 | opp_overlap 1482243 1482231 1482228, overlap 1482234 GCTAAAGCACAAAAA GCACC TGTCAGG GGTGC TTTTTGTGCTGCTGA TERM 1824 1482243 - 1482259 + T 80 -5.8 -4.93296 | opp_overlap 1482234 1482243, overlap 1482231 1482228 GCTAAAGCACAAAAA GCACCT GTCAG GGGTGC TTTTTGTGCTGCTGA SpyM51509 1482702 - 1482298 - | hypothetical protein TERM 1825 1482613 - 1482593 - G 100 -13.3 -5.12707 | CTAAACCCCAAAAAA GCCACCCCT ATC AGAGGTGGC CTGACTACTAAAGGG SpyM51510 1483209 - 1482745 - | hypothetical protein TERM 1826 1484081 - 1484113 + G 70 -9.2 -3.14602 | overlap 1484080 TACGAGACGTTTTTG CGTGATATCGGTGT TTCAC ACGCTGATCTCACG TCTTACTACCGTAAC TERM 1827 1484400 - 1484386 - g 83 -3.5 -5.56568 | ACAGGACCAAAAAAA GCTCC ACATA GAAGC GTATTTCAAGGGCAG SpyM51511 1483670 - 1484422 + | putative mono-ADP-ribosyltransferase TERM 1828 1484478 - 1484434 - T 74 -9.4 -3.02511 | opp_overlap 1484439 1484441 1484450, overlap 1484450 GTGACGGCCTCAACA CCGATCACCAAAAAAAGGAC TCCAT GTCCTTTTTTTGAGGTTCTG ATACTCAAAAAAAGC TERM 1829 1484439 - 1484473 + T 73 -8.7 -3.44051 | opp_overlap 1484434 1484450, overlap 1484441 1484450 GGCCTCAACACCGAT CACCAAAAAAAGGAC TCCAT GTCCTTTTTTTGAGG TTCTGATACTCAAAA TERM 1830 1484441 - 1484472 + T 74 -9.7 -2.66216 | gap 1, opp_overlap 1484434 1484450, overlap 1484439 1484450 CCTCAACACCGATCA C-CAAAAAAAGGAC TCCAT GTCCTTTTTTTGAG GTTCTGATACTCAAA TERM 1831 1484462 - 1484450 - T 88 -4.8 -5.55664 | opp_overlap 1484441 1484439 1484450, overlap 1484434 CGATCACCAAAAAAA GGAC TCCAT GTCC TTTTTTTGAGGTTCT TERM 1832 1484450 - 1484462 + T 88 -4.8 -5.48303 | opp_overlap 1484450 1484434, overlap 1484441 1484439 CGATCACCAAAAAAA GGAC TCCAT GTCC TTTTTTTGAGGTTCT TERM 1833 1484562 - 1484535 - T 100 -10 -5.44119 | opp_overlap 1484537 1484540 TTGAGGCCAAAAAAA GACAAGCAAG AGCTGATG CTTGCTTGTC TTGAAAGGTCGTGCG nrdE 1486807 - 1484627 - | ribonucleotide-diphosphate reductase subunit alpha nrdI 1487262 - 1486774 - | ribonucleotide reductase stimulatory protein nrdF 1488279 - 1487266 - | ribonucleotide-diphosphate reductase subunit beta TERM 1834 1488484 - 1488504 + r 70 -3.3 -4.90778 | gap 1, overlap 1488485 GCTCAACTGTCTTGT G-GGACAC GCTCTA GTGTCCTC TTTTGTTTGGCTAAA TERM 1835 1488485 - 1488502 + r 73 -7 -4.07285 | overlap 1488484 CTCAACTGTCTTGTG GGACAC GCTCTA GTGTCC TCTTTTGTTTGGCTA TERM 1836 1488520 - 1488535 + r 73 -6.2 -4.37092 | opp_overlap 1488520 TTTTGTTTGGCTAAA GTTAAG CATA CTTAAC TTTTATAAAAACCAT TERM 1837 1488728 - 1488751 + r 86 -6.8 -5.1101 | opp_overlap 1488728 AGGCAATCAAAAAAA CCTAAGCA CATATTCT TGCTTAGG TTTTTTGAATAATAG TERM 1838 1488751 - 1488728 - R 93 -6.8 -5.64006 | opp_overlap 1488728 AGGCAATCAAAAAAA CCTAAGCA CATATTCT TGCTTAGG TTTTTTGAATAATAG metG 1490771 - 1488774 - | methionyl-tRNA synthetase TERM 1839 1490984 - 1490965 - R 78 -10.8 -2.64134 | overlap 1490962 1490961 CAGCAAATCAACGGA GGGTAAGT AAAA ACTTACCC TAAATGAACTTTCTT SpyM51516 1491721 - 1491014 - | hypothetical protein TERM 1840 1491785 - 1491771 - R 100 -7.2 -5.86976 | opp_overlap 1491771, overlap 1491774 TTACAAAAGAAAAAA TACTGA AAT TCAGTA TTTCAAATTGCTGAA SpyM51517 1492003 - 1491824 - | hypothetical protein TERM 1841 1491973 - 1491983 + g 73 -6.8 -4.2687 | opp_overlap 1491961 AATCGGATGTCACAT CAGC AGA GCTG TTTATGCTTTTTGAG TERM 1842 1492043 - 1492029 - R 73 -7.2 -4.07568 | opp_overlap 1492029 1492031 GTCTCCGTTCTAAAA TACTGA AGT TCAGTA TGTTGAATGACAAAG TERM 1843 1492318 - 1492375 + r 100 -18.1 -4.41302 | gap 1, opp_overlap 1492327 1492329 1492337, overlap 1492319 1492327 1492329 1492337 AGTCATCGTAGCACA C-GACAATAACACCATAAAAGCAAGCCA GTT TGGCTTGCTTTTATGGTCTTTATGTCTG TTTCTTACTTTGCTC TERM 1844 1492319 - 1492373 + r 100 -21.8 -3.797 | opp_overlap 1492327 1492329 1492337, overlap 1492318 1492327 1492329 1492337 GTCATCGTAGCACAC GACAATAACACCATAAAAGCAAGCCA GTT TGGCTTGCTTTTATGGTCTTTATGTC TGTTTCTTACTTTGC TERM 1845 1492327 - 1492365 + r 100 -20.6 -4.25527 | opp_overlap 1492327 1492329 1492337, overlap 1492319 1492318 1492329 1492337 AGCACACGACAATAA CACCATAAAAGCAAGCCA GTT TGGCTTGCTTTTATGGTC TTTATGTCTGTTTCT TERM 1846 1492365 - 1492327 - R 100 -20.6 -3.87505 | opp_overlap 1492327 1492319 1492318 1492329 1492337, overlap 1492329 1492337 AGCACACGACAATAA CACCATAAAAGCAAGCCA GTT TGGCTTGCTTTTATGGTC TTTATGTCTGTTTCT TERM 1847 1492363 - 1492329 - R 100 -23.2 -3.51879 | opp_overlap 1492327 1492319 1492318 1492329 1492337, overlap 1492327 1492337 CACACGACAATAACA CCATAAAAGCAAGCCA GTT TGGCTTGCTTTTATGG TCTTTATGTCTGTTT TERM 1848 1492329 - 1492363 + r 100 -23.2 -3.70694 | opp_overlap 1492329 1492327 1492337, overlap 1492327 1492319 1492318 1492337 CACACGACAATAACA CCATAAAAGCAAGCCA GTT TGGCTTGCTTTTATGG TCTTTATGTCTGTTT TERM 1849 1492337 - 1492355 + r 100 -13.2 -4.59207 | opp_overlap 1492329 1492327 1492337, overlap 1492329 1492327 1492319 1492318 AATAACACCATAAAA GCAAGCCA GTT TGGCTTGC TTTTATGGTCTTTAT TERM 1850 1492355 - 1492337 - R 100 -13.2 -4.57533 | opp_overlap 1492337 1492329 1492327 1492319 1492318, overlap 1492329 1492327 AATAACACCATAAAA GCAAGCCA GTT TGGCTTGC TTTTATGGTCTTTAT TERM 1851 1492493 - 1492507 + r 88 -5 -5.44119 | CTTTGCGTTTTGTTA TCAATC TTT GGTTGA TTTTTTTCGGCTAAA cspA 1497433 - 1492493 - | putative cell surface protease TERM 1852 1497657 - 1497686 + r 79 -5.1 -5.12474 | gap 1, opp_overlap 1497657 TTTTGCAGTGTAAAA CCTCTACTATT-TG TGA CATGATAGCAGAGG TTTTTGTCTGTTCTA lctO 1498880 - 1497699 - | L-lactate oxidase TERM 1853 1498856 - 1498867 + g 73 -2.2 -5.27923 | AATCGGTTGTTTCTT CGGT GATG ACTG TTTTTTGTGCCATTG exoA 1499114 - 1499941 + | exodeoxyribonuclease TERM 1854 1500009 - 1499952 - T 95 -11.7 -4.62471 | gap 1, opp_overlap 1499966 1500000, overlap 1499954 1499966 TCTAATTTCTAAAAA CAGA-TCCCAAAAAAGGACAAGGC GTTATAATGTT GCCTTGTCCTTTTTTGAGACTTTG TCGCATTATCCTAAA TERM 1855 1500005 - 1499954 - T 100 -13.4 -3.92577 | gap 1, opp_overlap 1499966 1500000, overlap 1499952 1499966 TAATTTCTAAAAACA GATCCCAAAAAAGGACAAGGC GTTATAATGTT GCCTTGTCCTTTTTTGAGA-C TTTGTCGCATTATCC TERM 1856 1499966 - 1499994 + T 100 -10.3 -5.07107 | opp_overlap 1499954 1499952 1499966 ACAGATCCCAAAAAA GGACAAGGCGTTA TAA TGTTGCCTTGTCC TTTTTTGAGACTTTG TERM 1857 1499994 - 1499966 - T 93 -7.5 -5.08169 | opp_overlap 1499966, overlap 1499954 1499952 ACAGATCCCAAAAAA GGACAAGGC GTTATAATGTT GCCTTGTCC TTTTTTGAGACTTTG SpyM51521 1500371 - 1500015 - | ArsC family protein TERM 1858 1500397 - 1500413 + H 80 -6.5 -4.7871 | overlap 1500399 TTAGGGTAACTGTTT TAGGCGT GAG GCGCCTG TTTTTGGTCATCATT TERM 1859 1500399 - 1500411 + H 73 -6.9 -4.00443 | overlap 1500397 AGGGTAACTGTTTTA GGCGT GAG GCGCC TGTTTTTGGTCATCA TERM 1860 1500856 - 1500867 + G 73 -5.8 -4.60797 | GACCATGATTCGACC TCGC GGTG GCGA TTTTGTCTATAACGA SpyM51522 1500671 - 1501300 + | CutC family protein TERM 1861 1501337 - 1501311 - T 75 -7.4 -4.323 | opp_overlap 1501311 TTTAAACACCTAAAA GACCATCAAC AAATCCA ATTGATGGTC TTTTTTCTCTTAGTT TERM 1862 1501311 - 1501337 + T 93 -6.7 -5.50925 | opp_overlap 1501311 TTTAAACACCTAAAA GACCATCAA CAAATCCAA TTGATGGTC TTTTTTCTCTTAGTT SpyM51523 1501713 - 1501297 - | hypothetical protein SpyM51524 1502603 - 1501740 - | tetrapyrrole (corrin/porphyrin) methylase family protein TERM 1863 1501926 - 1501942 + g 70 -7.9 -3.73775 | opp_overlap 1501926, overlap 1501928 CACAATCAGCAGACA CTCCCCT TTT AGGGGTG TTTCCTCAAGGTAGG TERM 1864 1501928 - 1501940 + g 74 -9.1 -3.45324 | opp_overlap 1501926, overlap 1501926 CAATCAGCAGACACT CCCCT TTT AGGGG TGTTTCCTCAAGGTA TERM 1865 1502556 - 1502569 + g 86 -2.4 -5.88197 | opp_overlap 1502556, overlap 1502545 1502544 GGTTGGAACCAAATA CAAG GTTCCG CTTG TTTTTTTGTCTTTAA SpyM51525 1502931 - 1502608 - | DNA replication intiation control protein YabA TERM 1866 1502723 - 1502743 + g 81 -6.9 -4.67011 | opp_overlap 1502723 ATTCCCTCTAAGTGA TCCTTCC TTTGTTT GGAAGGA TTTTTAGCTACCGTT holB 1504469 - 1503594 - | DNA polymerase III subunit delta' tdk 1505122 - 1504487 - | thymidylate kinase TERM 1867 1505198 - 1505176 - R 71 -4.2 -4.7329 | gap 1, opp_overlap 1505176, overlap 1505166 AAAATGAGCTAAAAA GCACTGGCA TATCTT TG-CAGTGC TCTATTTTAGGACCA TERM 1868 1505365 - 1505377 + r 82 -7.7 -4.40037 | TAATCAGTAACTAGG GGGTT GTT AACCC TTTTGATGGTTGTTT SpyM51529 1505646 - 1505371 - | hypothetical protein TERM 1869 1506129 - 1506094 - R 74 -9.2 -3.01712 | opp_overlap 1506100 1506103, overlap 1506100 TTTTCCTTTCTAAGA GAAAAAGCATCCTAGA AGTT TCTAGAATACTTTTGC AGAGATCCTCTTTAT TERM 1870 1506123 - 1506100 - R 86 -6.8 -5.0916 | opp_overlap 1506100 1506103, overlap 1506094 TTTCTAAGAGAAAAA GCATCCTAGA AGTT TCTAGAATAC TTTTGCAGAGATCCT clpP 1506731 - 1506141 - | ATP-dependent Clp protease proteolytic subunit upp 1507584 - 1506955 - | uracil phosphoribosyltransferase TERM 1871 1507733 - 1507707 - R 79 -3.1 -5.52023 | gap 1 ATCATTAAGAAAAAA CGATTTCGATAA ACAC TCA-CGAAACCG TTCTTGGTGTCATTA SpyM51532 1509385 - 1507751 - | putative polysaccharide biosynthesis protein murE 1509473 - 1510918 + | UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase TERM 1872 1511018 - 1511031 + F 91 -6.7 -5.40625 | opp_overlap 1511018, overlap 1511011 AATCACATCAAAAAA GGCTT TGTT AAGCC TTTTTTCTATGCTAT TERM 1873 1511031 - 1511018 - f 86 -6.7 -5.2422 | opp_overlap 1511018 1511011 AATCACATCAAAAAA GGCTT TGTT AAGCC TTTTTTCTATGCTAT TERM 1874 1511220 - 1511232 + G 80 -6.3 -4.70583 | ACAGCGTACCATCAT CGATA AAT TATCG TTTTATATTCCTGAA fhuC 1511164 - 1511946 + | ferrichrome transport ATP-binding protein TERM 1875 1512267 - 1512254 - g 76 -2.4 -5.46629 | opp_overlap 1512263, overlap 1512259 1512263 AAGACTGTAAAAAAA GCAA AGCAAG TTGC TGCAACTGATTTAGA fhuD 1511972 - 1512904 + | putative ferrichrome-binding protein precursor TERM 1876 1513709 - 1513719 + G 75 -5.4 -4.77775 | AGCAGCTGTAGCCAT TGCT GGA AGCA TTTCTTTTATCGGCT fhuB 1512915 - 1513946 + | ferrichrome transport permease fhuG 1513943 - 1514944 + | ferrichrome transport permease TERM 1877 1514982 - 1514958 - T 100 -9.4 -4.7329 | opp_overlap 1514958 AAAAGCACTCAAAAA GCTAAGAACA GTCCT TGTTCCTAGC TTTTTTCTATGGTGC TERM 1878 1514958 - 1514982 + T 95 -7.9 -5.39721 | opp_overlap 1514958 AAAAGCACTCAAAAA GCTAAGAACAG TCC TTGTTCCTAGC TTTTTTCTATGGTGC SpyM51538 1515642 - 1514989 - | hypothetical protein TERM 1879 1515699 - 1515675 - R 100 -10.8 -5.17054 | opp_overlap 1515675 AGAAGAGTGAAAAAA GGACTTGGTC AAAAA AACCAAGTCC TTTTAAAGCGTCTTT TERM 1880 1515675 - 1515699 + r 86 -10.1 -4.11773 | opp_overlap 1515675 AGAAGAGTGAAAAAA GGACTTGGT CAAAAAA ACCAAGTCC TTTTAAAGCGTCTTT ppaC 1516653 - 1515718 - | putative manganese-dependent inorganic pyrophosphatase TERM 1881 1516770 - 1516754 - R 95 -10.9 -4.67556 | ATAATACTTTAAAAA GTTGAGG AAA CCTCAAC CCTATAACAGCTCTT pflC 1517575 - 1516784 - | pyruvate formate-lyase activating enzyme TERM 1882 1516828 - 1516838 + g 75 -5.4 -4.7416 | CTGTGTAAGATTCGG TCTG CAT CAGA TTTTTAGCATTTTGA TERM 1883 1517658 - 1517638 - R 100 -11.2 -4.7254 | opp_overlap 1517638 ACTTTTCATCAAAAA GACTAGGC ATGGA GCCTAGTC TTCCTCAATAATCTG TERM 1884 1517638 - 1517658 + r 80 -11.2 -3.1994 | opp_overlap 1517638 ACTTTTCATCAAAAA GACTAGGC ATGGA GCCTAGTC TTCCTCAATAATCTG SpyM51541 1518987 - 1517653 - | putative transport protein SpyM51542 1519674 - 1519120 - | SAM-dependent methyltransferase TERM 1885 1519171 - 1519157 - G 75 -2.8 -5.2112 | opp_overlap 1519157 AACATGATTAAAAAA GGTG GGGTATT CACC TGATTAAGAGGCTGA TERM 1886 1519571 - 1519545 - G 76 -7.4 -4.22407 | CATCAAAAGCATAAA CCTTTTTAGC TAATTGT GCCAAAAAGG CAGTATCATTTCCAT SpyM51543 1520633 - 1519713 - | radical SAM superfamily protein TERM 1887 1520889 - 1520840 - R 90 -8.9 -4.43879 | opp_overlap 1520846 1520849, overlap 1520841 1520846 ATCATCTAACTAAAA CTAAAATAACACTGGCAATCA AGGGGTGA TGCTTGCCAATGTTATTCTAA ATGATTTAAATAAGC TERM 1888 1520888 - 1520841 - R 77 -10.2 -3.25604 | opp_overlap 1520846 1520849, overlap 1520840 1520846 TCATCTAACTAAAAC TAAAATAACACTGGCAATCA AGGGGTGA TGCTTGCCAATGTTATTCTA AATGATTTAAATAAG TERM 1889 1520883 - 1520846 - R 88 -7.9 -4.72729 | opp_overlap 1520846 1520849, overlap 1520841 1520840 TAACTAAAACTAAAA TAACACTGGCAATCA AGGGGTGA TGCTTGCCAATGTTA TTCTAAATGATTTAA SpyM51544 1521579 - 1520926 - | PAP2 superfamily protein TERM 1890 1521298 - 1521283 - G 70 -3.2 -4.86621 | opp_overlap 1521283 AGTCGTAATCAAAAA TGCTGC AATG GCACCA TTTGATAAGATAAAC SpyM51545 1522144 - 1521581 - | hypothetical protein TERM 1891 1522179 - 1522152 - R 90 -7.2 -5.21709 | TTTGACATTAAAAAA TTCCTCCAATTT TTTC AAATTGAAAGAA GTTCCGTCGTTATTG TERM 1892 1522450 - 1522393 - R 100 -22.5 -3.73402 | opp_overlap 1522393 1522402, overlap 1522402 ATAGCTTTGACTAAA TTTTTAAAAGCGTCAGCTACTGACAAC GCAT GTTGCCAAAAACTGACGCTTTTAAAAA GTCCATTATTTTAGT TERM 1893 1522393 - 1522451 + r 75 -9.9 -2.77539 | gap 1, opp_overlap 1522393 1522402, overlap 1522402 ATAGCTTTGACTAAA -TTTTTAAAAGCGTCAGCTACTGACAAC GCAT GTTGCCAAAAACTGACGCTTTTAAAAAG TCCATTATTTTAGTT TERM 1894 1522441 - 1522402 - R 100 -14.4 -4.17491 | opp_overlap 1522393 1522402, overlap 1522393 ACTAAATTTTTAAAA GCGTCAGCTACTGACAAC GCAT GTTGCCAAAAACTGACGC TTTTAAAAAGTCCAT TERM 1895 1522402 - 1522441 + r 76 -7.8 -4.09864 | opp_overlap 1522402 1522393, overlap 1522393 ACTAAATTTTTAAAA GCGTCAGCTACTGACAAC GCAT GTTGCCAAAAACTGACGC TTTTAAAAAGTCCAT SpyM51546 1523004 - 1522456 - | 23S rRNA methyltransferase SpyM51547 1523442 - 1523182 - | hypothetical protein rluB 1524164 - 1523442 - | ribosomal large subunit pseudouridine synthase B scpB 1524836 - 1524285 - | segregation and condensation protein B scpA 1525537 - 1524833 - | segregation and condensation protein A TERM 1896 1525033 - 1525070 + g 70 -2.8 -5.03715 | opp_overlap 1525044, overlap 1525015 AAGCCATCATGTCTT CAATCTTATAATCATC ACGCTC GATGACTGTATGGTTG TTTTTTAAAACTGCT xerD 1526283 - 1525537 - | site-specific tyrosine recombinase XerD-like protein TERM 1897 1525943 - 1525958 + g 72 -3.2 -5.14563 | AAGCTGATTAATTGC CCCC ACACAAAA GGGG TTTTTTGATAGAAAA SpyM51552 1526741 - 1526280 - | CBS domain containing protein SpyM51553 1527259 - 1526738 - | putative phosphoesterase SpyM51554 1528224 - 1527238 - | fused deoxyribonucleotide triphosphate pyrophosphatase/unknown domain-containing protein glr 1529015 - 1528221 - | glutamate racemase TERM 1898 1529048 - 1529071 + r 100 -11.1 -4.85782 | opp_overlap 1529048 TGACGATATGAAAAA CTCAGTTGG AAATAG CCAACTGAG TTTCTTTTTAAACCC TERM 1899 1529071 - 1529048 - R 100 -11.1 -4.82667 | opp_overlap 1529048 TGACGATATGAAAAA CTCAGTTGG AAATAG CCAACTGAG TTTCTTTTTAAACCC SpyM51556 1529435 - 1529193 - | hypothetical protein TERM 1900 1529571 - 1529619 + r 100 -18.8 -4.1552 | gap 1, opp_overlap 1529579 1529586, overlap 1529573 1529586 ACAGTTTACTTATCC TG-TTAACATTAAAAAGTGAGTA GTTA TACTCACTTTTTAATGTTAATCA TTTCTTCCAAAAATA TERM 1901 1529573 - 1529616 + r 100 -21.6 -3.10244 | opp_overlap 1529579 1529586, overlap 1529571 1529586 AGTTTACTTATCCTG TTAACATTAAAAAGTGAGTA GTTA TACTCACTTTTTAATGTTAA TCATTTCTTCCAAAA TERM 1902 1529610 - 1529579 - R 100 -14.8 -3.02511 | opp_overlap 1529573 1529571 1529586, overlap 1529586 CTTATCCTGTTAACA TTAAAAAGTGAGTA GTTA TACTCACTTTTTAA TGTTAATCATTTCTT TERM 1903 1529586 - 1529603 + r 95 -8.5 -4.89233 | opp_overlap 1529579 1529586, overlap 1529573 1529571 TGTTAACATTAAAAA GTGAGTA GTTA TACTCAC TTTTTAATGTTAATC TERM 1904 1529603 - 1529586 - R 95 -8.5 -4.87626 | opp_overlap 1529586 1529573 1529571, overlap 1529579 TGTTAACATTAAAAA GTGAGTA GTTA TACTCAC TTTTTAATGTTAATC SpyM51557 1530302 - 1529613 - | hypothetical protein SpyM51558 1530817 - 1530317 - | hypothetical protein SpyM51559 1531593 - 1530856 - | 23S rRNA methyltransferase SpyM51560 1531854 - 1532132 + | putative acylphosphatase SpyM51561 1532214 - 1533137 + | OxaA-like protein precursor TERM 1905 1533241 - 1533194 - T 100 -15.8 -5.38951 | overlap 1533195 AAGTTAGACAAAAAA CGATATGCCCCCTTTTACTGGA CTCA TCTAGTGAAAGGGGACATATCA AAAAAATCTAACGAT TERM 1906 1533240 - 1533195 - T 100 -17.1 -3.81744 | overlap 1533194 AGTTAGACAAAAAAC GATATGCCCCCTTTTACTGGA CTCA TCTAGTGAAAGGGGACATATC AAAAAAATCTAACGA TERM 1907 1533562 - 1533585 + T 73 -3.1 -5.17488 | overlap 1533565 TGTCCAACTTTTTGG GGTCAGTAC ATTAAG GTGCTGGTC TTTTCTTTTGGTATT greA 1534243 - 1533761 - | transcription elongation factor GreA TERM 1908 1534276 - 1534322 + r 100 -23.5 -2.85503 | gap 1, opp_overlap 1534276 1534283 1534289, overlap 1534283 1534289 TCTTTTTTGAACGAA TCAG-AAACACAAACATGGTGC TTAA GCACCATGTTTGTGTTTACTGA ATTTGACTATTCACA TERM 1909 1534322 - 1534276 - R 100 -23.5 -3.33696 | gap 1, opp_overlap 1534276 1534283 1534289, overlap 1534283 1534289 TCTTTTTTGAACGAA TCAG-AAACACAAACATGGTGC TTAA GCACCATGTTTGTGTTTACTGA ATTTGACTATTCACA TERM 1910 1534314 - 1534283 - R 100 -20.4 -4.10331 | opp_overlap 1534276 1534283 1534289, overlap 1534276 1534289 TGAACGAATCAGAAA CACAAACATGGTGC TTAA GCACCATGTTTGTG TTTACTGAATTTGAC TERM 1911 1534283 - 1534314 + r 100 -20.4 -3.82097 | opp_overlap 1534283 1534276 1534289, overlap 1534276 1534289 TGAACGAATCAGAAA CACAAACATGGTGC TTAA GCACCATGTTTGTG TTTACTGAATTTGAC TERM 1912 1534308 - 1534289 - R 100 -12.2 -4.42513 | opp_overlap 1534283 1534276 1534289, overlap 1534283 1534276 AATCAGAAACACAAA CATGGTGC TTAA GCACCATG TTTGTGTTTACTGAA TERM 1913 1534289 - 1534308 + r 100 -12.2 -4.36903 | opp_overlap 1534289 1534283 1534276, overlap 1534283 1534276 AATCAGAAACACAAA CATGGTGC TTAA GCACCATG TTTGTGTTTACTGAA SpyM51563 1535884 - 1534316 - | putative aminodeoxychorismate lyase TERM 1914 1534348 - 1534371 + g 81 -6.8 -4.68593 | opp_overlap 1534350 TCACATATTTTTCAA CATTTGCAGA GTGC TCTTCAAATG TTTTTGCATAGTAAA TERM 1915 1534979 - 1534996 + g 76 -3.5 -5.32699 | opp_overlap 1534972 CAAAAAATCCTTCTC GTTAAAA GGTG TTTTAGC TTTTTTGGTCTTTCC SpyM51564 1536484 - 1536002 - | acetyltransferase (GNAT) family protein TERM 1916 1536524 - 1536510 - R 95 -11.4 -4.58466 | opp_overlap 1536508 TTTAGAATGAGAAAA CCTGCC TAA GGCAGG ACATGTTATTGGTTA murC 1537858 - 1536530 - | UDP-N-acetylmuramate--L-alanine ligase TERM 1917 1537448 - 1537419 - G 76 -3.5 -5.2853 | overlap 1537421 GATTCAAAAACAAAA TACTGCGCATTAG CAGA CCCACGCCCAGTA CCATCACCAATTAAA SpyM51566 1538500 - 1537898 - | hypothetical protein SpyM51567 1541840 - 1538742 - | putative helicase TERM 1918 1541993 - 1541961 - R 95 -8.5 -4.92783 | opp_overlap 1541961 AAGGTATTATAAAAA GGACTGTCTCCTGTA ACA TACACAACACAGTCC TTATCAATGATGAGA engA 1543357 - 1542047 - | GTP-binding protein EngA dnaI 1544322 - 1543420 - | primosomal protein DnaI TERM 1919 1543713 - 1543729 + g 70 -2.9 -5.09895 | opp_overlap 1543714, overlap 1543714 TTTCTTCTTTAACAG AGCCGTT TGA AATGGCA TTTTTTACATCAATG SpyM51570 1545495 - 1544323 - | replication initiation and membrane attachment protein SpyM51571 1545976 - 1545482 - | transcriptional regulator NrdR csrS 1547693 - 1546191 - | sensor histidine kinase TERM 1920 1547512 - 1547482 - G 82 -8.4 -4.27316 | TTCTCTAATGTAAAA TTAGAGTCCACCTC AGA AAGACGAACTCTAA CAATATTTACAGCTT csrR 1548385 - 1547699 - | response regulator protein TERM 1921 1548335 - 1548350 + g 74 -6.2 -4.43681 | opp_overlap 1548335 1548334 1548330 CAGCTCAAGAGAAAC GAATCT AGCC AGATTC TTTTCATCTTCAATA SpyM51574 1549185 - 1548652 - | hypothetical protein TERM 1922 1548680 - 1548703 + g 83 -6.1 -5.093 | opp_overlap 1548667 1548680 AACCCTTGCAAGCTA GCAAAAGGA TTATTT TCTTTTTGC TTTTCTTCTTTTAGA TERM 1923 1549422 - 1549391 - R 81 -3.8 -5.51046 | gap 1 CAAAGACATAAAAAA GTGAG-GCTTGAG CAAAAAC CCCAAACGCTCAC ATGTTTTTTAACCTT htpX 1550315 - 1549419 - | heat shock protein HtpX TERM 1924 1549944 - 1549959 + g 83 -9 -4.09864 | opp_overlap 1549937 1549936, overlap 1549942 AAGTAAACCTGTCGT TGCTGC AACA GCAGCA TTTTGAGGGCTAGAT TERM 1925 1550285 - 1550273 - G 70 -3.4 -4.85618 | opp_overlap 1550273 AAACAACTAATAAAA CAAC TGTTC GTTG CTTATTTTGTGAAAT SpyM51576 1550919 - 1550362 - | LemA family protein TERM 1926 1550553 - 1550572 + g 74 -6.5 -4.48175 | CCGTATTGGTCAACT CTTCTTG TAATTT CAAGAAG TTTTCGTTAGCTTTT TERM 1927 1551225 - 1551212 - g 84 -6.7 -4.85918 | TATTACAGAAGAAAA TGAGG TTTA CCTCA AGCATTTTTATGATT TERM 1928 1551424 - 1551436 + G 83 -3.4 -5.55664 | CTCAGGAATTGGGCT TGGA AAATG TCCA TTTTTTTCATGGTAG gidB 1551069 - 1551782 + | glucose-inhibited division protein B TERM 1929 1551796 - 1551813 + F 81 -5.6 -5.23016 | opp_overlap 1551796 1551795 AAAATAGTACCAAAG GCTAAG ATGAAA CTTAGC TTTTTTAACTTATTT SpyM51578 1551852 - 1553243 + | cation transport protein TERM 1930 1553685 - 1553711 + G 81 -7.3 -4.48713 | GAAAGCATCATCTAC CTCGAACATGG CATTT CCATGATTGAG TTTATTATTCCTAAA SpyM51579 1553253 - 1553927 + | TrkA family transport protein TERM 1931 1553936 - 1553959 + T 100 -11.1 -5.64304 | opp_overlap 1553936 TAAATAATAAAAAAA CATCCTTGG CGTTTT CCAAGGATG TTTTTTATTATGTTA TERM 1932 1553959 - 1553936 - T 100 -11.1 -6.01369 | opp_overlap 1553936 TAAATAATAAAAAAA CATCCTTGG CGTTTT CCAAGGATG TTTTTTATTATGTTA SpyM51580 1555196 - 1553982 - | serine/threonine transporter SstT SpyM51581 1555430 - 1556821 + | putative branched-chain amino acid transport system carrier protein TERM 1933 1556823 - 1556860 + T 91 -10.2 -4.57482 | gap 2, opp_overlap 1556826 1556829, overlap 1556826 ATGACATCATCTAAA C--AACAACACCCTAAGT AAAA ACTTAGGGTGTTGTTTCG TTTATTTATGACTAA TERM 1934 1556826 - 1556855 + T 100 -18.1 -4.29621 | opp_overlap 1556826 1556829, overlap 1556823 ACATCATCTAAACAA CAACACCCTAAGT AAAA ACTTAGGGTGTTG TTTCGTTTATTTATG TERM 1935 1556855 - 1556826 - T 100 -18.1 -3.98075 | opp_overlap 1556826 1556823, overlap 1556829 ACATCATCTAAACAA CAACACCCTAAGT AAAA ACTTAGGGTGTTG TTTCGTTTATTTATG TERM 1936 1556852 - 1556829 - T 100 -14 -4.10744 | opp_overlap 1556826 1556823, overlap 1556826 TCATCTAAACAACAA CACCCTAAGT AAAA ACTTAGGGTG TTGTTTCGTTTATTT SpyM51582 1557554 - 1556862 - | ABC transporter permease SpyM51583 1558619 - 1557555 - | ABC transporter ATP-binding protein SpyM51584 1559714 - 1558869 - | ABC transporter substrate-binding protein TERM 1937 1559317 - 1559327 + g 70 -5.4 -4.3453 | overlap 1559313 GCACCATTTGGCAGA TCAG CTA CTGA TTTGTATTTAGCCTT SpyM51585 1560884 - 1560042 - | ABC transporter substrate-binding protein TERM 1938 1560845 - 1560859 + g 75 -10 -3.23296 | CAAGGGTTGATGCTA GGGCAA TTG TTGCCC TTCCTAAATATTGTT TERM 1939 1561044 - 1561065 + r 89 -5.9 -5.35721 | opp_overlap 1561044 AGCATCACTTAAAAA GAGCTGAAA TAGT TTTCAACTC TTTTTATTATTCTAT TERM 1940 1561065 - 1561044 - R 88 -8.1 -4.68994 | opp_overlap 1561044 AGCATCACTTAAAAA GAGCTGAAA TAGT TTTCAACTC TTTTTATTATTCTAT SpyM51586 1561803 - 1561087 - | hypothetical protein TERM 1941 1562293 - 1562273 - R 95 -7 -5.41746 | opp_overlap 1562290 AAGCCCCCAAAAAAA CTCAATTA GAGTT TAATTGAG CCTCTCATTTTTTAT TERM 1942 1562290 - 1562300 + r 88 -5.4 -5.58179 | opp_overlap 1562273 CAATTAGAGTTTAAT TGAG CCT CTCA TTTTTTATTATAATA SpyM51587 1563391 - 1562285 - | hypothetical protein TERM 1943 1562979 - 1562991 + g 76 -3.4 -5.28176 | CCAGCAAAGATTTCC CACA TTTTT TGTG TTTTTTGTGGATAGC SpyM51588 1564388 - 1563645 - | hypothetical protein TERM 1944 1564422 - 1564404 - R 78 -6.7 -4.60487 | opp_overlap 1564402 1564404 TATCATCCTCAAAAA CCCTGTC GTATT GACAAGG TCTCTTTGTAACATT SpyM51589 1564789 - 1564436 - | iojap protein family TERM 1945 1564540 - 1564525 - G 82 -4 -5.40072 | CGTCTTCTAAAAAAA GATGTA CCAC CACATC GGTCAAATCAAGCAA SpyM51590 1565406 - 1564813 - | hypothetical protein TERM 1946 1564940 - 1564952 + g 70 -3.3 -4.86001 | opp_overlap 1564940 ACAGCCTGATTCAAA TCGAG CTT CGCGA TTTTTCTAGCGTCAT nadD 1566035 - 1565403 - | nicotinic acid mononucleotide adenylyltransferase SpyM51592 1566412 - 1566104 - | hypothetical protein TERM 1947 1566396 - 1566411 + g 78 -2.6 -5.43866 | TTTAAGAAAGCTCTT TGTTTA CTTG TAAGCA TTTTTTTCCAACTTC SpyM51593 1567556 - 1566438 - | GTP-binding protein YqeH TERM 1948 1567480 - 1567496 + g 87 -5.1 -5.4659 | overlap 1567470 TTTTTCAAAGCAGCA GCTGG CGTAAAA CCAGC TTTTTCTTTGTCTTC SpyM51594 1568083 - 1567556 - | hypothetical protein TERM 1949 1568344 - 1568317 - R 100 -12.2 -5.04597 | ACTGATATACAAAAA TCTTATCAAGAG TCAA CTCCTGATAAGA TAATCACAAATGATT comX2 1569223 - 1568642 - | putative competence-specific global transcription modulator 2 TERM 1950 1569182 - 1569207 + g 100 -10.5 -5.32944 | opp_overlap 1569183, overlap 1569183 GAGAACCACAAAAAA ACAACAGGACA CTAA TGTCCTGTTGC TTTTTTCATTATGCA TERM 1951 1569206 - 1569183 - G 100 -14 -5.73339 | opp_overlap 1569183 1569182 AGAACCACAAAAAAA CAACAGGACA CTAA TGTCCTGTTG CTTTTTTCATTATGC TERM 1952 1569183 - 1569206 + g 95 -14 -3.78682 | opp_overlap 1569183, overlap 1569182 AGAACCACAAAAAAA CAACAGGACA CTAA TGTCCTGTTG CTTTTTTCATTATGC TERM 1953 1569372 - 1569337 - R 74 -9.2 -3.04517 | opp_overlap 1569346, overlap 1569346 ACTCTTCTCTAAAAT GCAAAAAAAGATAGGA CGCT TCCTACCTCTTTCTAC TCCGCCAGTAGGACT TERM 1954 1569363 - 1569346 - R 91 -6.3 -5.61824 | opp_overlap 1569346, overlap 1569337 TAAAATGCAAAAAAA GATAGGA CGCT TCCTACC TCTTTCTACTCCGCC TERM 1955 1571575 - 1571608 + r 70 -8.9 -3.03412 | overlap 1571569 1571574 TCTTAGCACTCGCAG TCTGACTGCCGATGA TATC TCGTTGGCATTCGGA GTTTATCTGAGATTG TERM 1956 1572267 - 1572286 + r 90 -12.2 -3.62096 | opp_overlap 1572266 1572265 CGCAGTCCTACAACC CCGAAGTG TAAA CACTTCGG TTTGCCCTCCTGCCG TERM 1957 1572741 - 1572786 + r 78 -7.7 -4.2558 | gap 1, opp_overlap 1572747, overlap 1572747 ACTTCTGTAGAAAAT TAGG-AATCTGACCATGTGTGC CTT GCACACAAGGGAAGATTGTCTA TTTTCCTAGGAAGTG TERM 1958 1572747 - 1572779 + r 80 -9.1 -3.84985 | opp_overlap 1572747, overlap 1572741 GTAGAAAATTAGGAA TCTGACCATGTGTGC CTT GCACACAAGGGAAGA TTGTCTATTTTCCTA TERM 1959 1572779 - 1572747 - R 73 -9.1 -3.3972 | opp_overlap 1572747 1572741 GTAGAAAATTAGGAA TCTGACCATGTGTGC CTT GCACACAAGGGAAGA TTGTCTATTTTCCTA TERM 1960 1573510 - 1573497 - R 70 -5.3 -4.43477 | TGTACCGAAGTAAAA CTCTA TCTC TAGAG CGGGCATCGGGATGT TERM 1961 1574550 - 1574564 + r 90 -8.6 -4.65032 | AACTTACTCGTTCCT TCTGTC GCT GACAGA TTTATTTCTCGTTTC SpyM51596 1575985 - 1574912 - | putative glycerate kinase TERM 1962 1575054 - 1575034 - G 70 -2.5 -5.08824 | overlap 1575010 GTTGTATTGAAAAAA CAGCCAAAA AGT CTTCTGCTG CTAGTCCTGTCTCAA TERM 1963 1577027 - 1577001 - g 76 -4.4 -5.0809 | opp_overlap 1577004, overlap 1576995 1577004 AACAAACCACAAAAA GATCTCTTTGCC TTT GCCAAAGAAGTC CTATCTATCCCTCGT TERM 1964 1578451 - 1578475 + G 74 -9.3 -3.61398 | GCCTCTACTCTAATG GGGGTGAAAAC GAC GTTTTGGCCCC TTCTTGGGAAGAAGA SpyM51597 1576335 - 1579313 + | type I restriction-modification system R protein TERM 1965 1579662 - 1579680 + G 74 -4.6 -4.84017 | TTAGCCATTATTCCT GAGAAAAA ATA TTCTTCTC TTTTTATAAAAAATT TERM 1966 1579729 - 1579713 - g 89 -5.9 -5.42975 | opp_overlap 1579713, overlap 1579715 TTATATAAACAAAAA TCCTCAA TTA TTGAGAA ATATTTACAAGGTGG TERM 1967 1580284 - 1580257 - g 70 -9.4 -2.60988 | opp_overlap 1580255, overlap 1580254 AAGGTAATGAATTTA TCTTTCAAATAT TAAA ATACTTGAAAGA AATTGGTTATTGGAA SpyM51598 1579326 - 1580501 + | type I restriction-modification system S protein SpyM51599 1580514 - 1582094 + | type I restriction-modification system M protein TERM 1968 1582102 - 1582140 + T 78 -9 -3.6715 | opp_overlap 1582107, overlap 1582107 1582109 GAAACTAAAAGACAA AAAAACACCACAGTAG ATGATTA CTACTGTGGCGTTTTA TTTAAAATTGAGTAG TERM 1969 1582135 - 1582107 - T 100 -11.1 -5.9362 | opp_overlap 1582107 1582102 1582109 TAAAAGACAAAAAAA CACCACAGTAG ATGATTA CTACTGTGGCG TTTTATTTAAAATTG TERM 1970 1582107 - 1582135 + T 100 -8.9 -4.90525 | opp_overlap 1582107, overlap 1582102 1582109 TAAAAGACAAAAAAA CACCACAGTAG ATGATTA CTACTGTGGCG TTTTATTTAAAATTG TERM 1971 1582109 - 1582133 + T 74 -10.1 -2.70854 | opp_overlap 1582107, overlap 1582107 1582102 AAAGACAAAAAAACA CCACAGTAG ATGATTA CTACTGTGG CGTTTTATTTAAAAT TERM 1972 1582387 - 1582412 + T 70 -8.5 -3.34233 | TAAAGTAGTTCCAAT CGTTGATATAT AAGC ATATATTAACG TTCTGGGAGTTGTGA TERM 1973 1582629 - 1582607 - T 84 -11.4 -3.17714 | opp_overlap 1582607 GGAAATCCCTAGCAA CGACACAAGT AAA ACTTATGTCG TTTGATTATCTGCAA TERM 1974 1582607 - 1582629 + T 85 -9.2 -4.04174 | opp_overlap 1582607 GGAAATCCCTAGCAA CGACACAAGT AAA ACTTATGTCG TTTGATTATCTGCAA salR 1583251 - 1582646 - | response regulator protein salK 1584794 - 1583232 - | sensor histidine kinase salY 1586741 - 1584834 - | ABC transporter permease TERM 1975 1586572 - 1586558 - G 78 -2.8 -5.51402 | ATACAGTCAAAAAAA CTAATG ACC CGTTAG CAATAACTAGAGCTT salX 1587480 - 1586743 - | ABC transporter ATP-binding protein TERM 1976 1589831 - 1589805 - R 100 -12.4 -4.68994 | opp_overlap 1589805 1589804 ACCACTACTTAAAAA TCCTGCCTAGAC TGA GTCTAAACAGGA AATTTTTAGTCTGCT salA 1590019 - 1589864 - | lantibiotic salivaricin A precursor lacG 1591929 - 1590523 - | 6-phospho-beta-galactosidase TERM 1977 1590800 - 1590767 - G 81 -11.2 -3.03443 | opp_overlap 1590766 1590765 CCATCATCATAGACA GTCTTGTCTACAAA CTCATC TTTGTAGCCAAGAC CATTCTCTGTAATGT TERM 1978 1591997 - 1591960 - R 95 -11.7 -4.59511 | gap 1, opp_overlap 1591964, overlap 1591964 AATATCTTTCAAAAA TAAAGTTCCCAAA-ACAA TTT TTGTGTTTGAGAACTTTA CGACATTTAAACTGT TERM 1979 1591993 - 1591964 - R 95 -8.1 -4.85782 | gap 1, opp_overlap 1591964, overlap 1591960 TCTTTCAAAAATAAA GTTCCCAAA-ACAA TTT TTGTGTTTGAGAAC TTTACGACATTTAAA lacE 1593714 - 1592017 - | PTS system, lactose-specific IIBC component lacF 1594031 - 1593714 - | PTS system, lactose-specific IIA component lacD2 1595038 - 1594055 - | tagatose 1,6-diphosphate aldolase lacC2 1595971 - 1595042 - | tagatose-6-phosphate kinase lacB2 1596534 - 1596019 - | galactose-6-phosphate isomerase subunit LacB lacA2 1596997 - 1596569 - | galactose-6-phosphate isomerase subunit LacA TERM 1980 1597133 - 1597180 + H 93 -6.8 -5.85011 | gap 1, opp_overlap 1597133 1597137 1597140 1597164, overlap 1597137 1597140 1597142 1597155 CACCAAACATAAAAG TCAACATTTTTTTGTTTATTTTT ATA AAAAATAAAC-AAAATATGTTTA TTTTTTTCATTTTTA TERM 1981 1597137 - 1597176 + H 95 -7.6 -5.25976 | gap 1, opp_overlap 1597137 1597133 1597140 1597164, overlap 1597133 1597140 1597142 1597155 AAACATAAAAGTCAA CATTTTTTTGTTTATTTTT ATA AAAAATAAAC-AAAATATG TTTATTTTTTTCATT TERM 1982 1597174 - 1597140 - H 75 -10.4 -2.55657 | opp_overlap 1597137 1597133 1597140 1597142 1597155, overlap 1597137 1597133 1597164 CATAAAAGTCAACAT TTTTTTGTTTATTTTT ATA AAAAATAAACAAAATA TGTTTATTTTTTTCA TERM 1983 1597140 - 1597174 + H 90 -10.4 -4.21073 | opp_overlap 1597140 1597137 1597133 1597164, overlap 1597137 1597133 1597142 1597155 CATAAAAGTCAACAT TTTTTTGTTTATTTTT ATA AAAAATAAACAAAATA TGTTTATTTTTTTCA TERM 1984 1597142 - 1597172 + H 95 -13 -3.65523 | opp_overlap 1597140 1597137 1597133 1597164, overlap 1597140 1597137 1597133 1597155 TAAAAGTCAACATTT TTTTGTTTATTTTT ATA AAAAATAAACAAAA TATGTTTATTTTTTT TERM 1985 1597180 - 1597164 - H 78 -3.8 -5.252 | opp_overlap 1597142 1597140 1597137 1597133 1597155, overlap 1597140 1597137 1597133 TATTTTTATAAAAAA TAAACA AAATA TGTTTA TTTTTTTCATTTTTA lacR2 1597443 - 1598216 + | lactose phosphotransferase system repressor 2 TERM 1986 1598609 - 1598619 + F 70 -3.2 -5.02074 | TTTGAGAATTGTGAA GCTT TAC GAGC TTTTTTAAGACCTGG SpyM51615 1598866 - 1599153 + | DNA-damage-inducible protein J SpyM51616 1599143 - 1599478 + | putative plasmid stabilisation system protein TERM 1987 1599489 - 1599510 + T 100 -10.9 -5.18357 | opp_overlap 1599489 AATAACACGTTAAAA GCCTTAGCA GTCT TGCTAGGGC TTTTTTGGTAGATTA TERM 1988 1599510 - 1599489 - T 83 -8.7 -4.21314 | opp_overlap 1599489 AATAACACGTTAAAA GCCTTAGCA GTCT TGCTAGGGC TTTTTTGGTAGATTA TERM 1989 1600298 - 1600278 - T 84 -4.7 -5.2853 | overlap 1600282 CAGCCAAAAAGAAAA GACACAACT AGC AGTTGCACC TCTTTCAATTAAGTC TERM 1990 1600704 - 1600678 - T 100 -12.4 -5.77632 | opp_overlap 1600678 AAAACGACAAAAAAA GCACCTTGCAAG AGA CTTGCAAAATGC TTGTAATCGTTGATG rpsI 1601123 - 1600731 - | 30S ribosomal protein S9 TERM 1991 1601007 - 1601024 + g 82 -4.2 -5.45652 | TAAGTCAGCATGTGG GATGTA TTCTTC TACATC TTTTTTGTTAACAGT rplM 1601590 - 1601144 - | 50S ribosomal protein L13 TERM 1992 1601788 - 1601802 + r 74 -10 -2.73875 | opp_overlap 1601787 1601786, overlap 1601785 CGATTTAGGAGAATG GCAGAG CTG CTCTGC TGGTGTTAACGAGAA SpyM51621 1602014 - 1601808 - | putative DNA-binding protein SpyM51622 1602517 - 1602011 - | hypothetical protein TERM 1993 1602642 - 1602619 - R 100 -8.2 -5.2189 | opp_overlap 1602619 1602630 TTAAGCAGCAAAAAA GGATTGAGGA TTTC TCTTCAATCC TTATAAGGGATTAAC TERM 1994 1602619 - 1602642 + r 80 -10.4 -3.31322 | opp_overlap 1602619, overlap 1602630 TTAAGCAGCAAAAAA GGATTGAGGA TTTC TCTTCAATCC TTATAAGGGATTAAC SpyM51623 1603513 - 1602653 - | DegV family protein SpyM51624 1604128 - 1603610 - | hypothetical protein TERM 1995 1604072 - 1604091 + g 79 -10.8 -3.22951 | opp_overlap 1604060, overlap 1604071 AAACAACTGACGGGT TGATTGCC AAAA GGCAATCA TATTATACCCATCTA SpyM51625 1604878 - 1604132 - | SpoU rRNA methylase family protein SpyM51626 1605722 - 1604925 - | hypothetical protein TERM 1996 1605920 - 1605897 - R 83 -9 -4.29738 | gap 1, opp_overlap 1605900 TCAGATCTATGAAAA TAAGAGTCTCC TAG GG-GACTCTTA TGAGGATATCAATTG SpyM51627 1606331 - 1605918 - | hypothetical protein cysS 1607667 - 1606324 - | cysteinyl-tRNA synthetase SpyM51629 1607925 - 1607695 - | hypothetical protein TERM 1997 1607967 - 1607949 - R 100 -11.8 -4.90266 | TTTATTAACGAAAAA CCTTCACA ACC TGTGAAGG CTTCAGAAAGTAGAC SpyM51630 1608168 - 1607938 - | hypothetical protein cysE 1608985 - 1608404 - | serine acetyltransferase SpyM51632 1609746 - 1608994 - | hypothetical protein TERM 1998 1609685 - 1609649 - G 78 -7.3 -4.39166 | overlap 1609652 GCCCAGACAGGAAAA TTATGGAAAGCGTTGAC AAG GGCAACACTATCCAAAA AATTATCAGGCGCAT TERM 1999 1609682 - 1609652 - G 70 -9 -3.17273 | overlap 1609649 CAGACAGGAAAATTA TGGAAAGCGTTGAC AAG GGCAACACTATCCA AAAAATTATCAGGCG comR 1611871 - 1609739 - | polynucleotide phosphorylase/polyadenylase TERM 2000 1612135 - 1612118 - R 85 -4.1 -5.77856 | opp_overlap 1612118 AACAAAGCAAAAAAA GCAGG TTGGTATG CCTGC TTTCGTCTCCTAATA SpyM51634 1612879 - 1612151 - | putative translaldolase ulaA 1614271 - 1612892 - | ascorbate-specific PTS system enzyme IIC TERM 2001 1613168 - 1613152 - G 70 -8.7 -3.33483 | TAGCGAAAGCACCAA TCATCGC ACC GCGACGA CCACCTGTTGAATTT SpyM51636 1614582 - 1614298 - | sugar phosphotransferase system (PTS),lactose/cellobiose-specific family IIB protein SpyM51637 1616635 - 1614575 - | PTS regulator TERM 2002 1616793 - 1616806 + r 86 -6.7 -5.15167 | AAAATAGGCAAATCT GGGAA TTGA TTCCC TTTTTCTTCATGATA TERM 2003 1616859 - 1616822 - R 84 -12.3 -2.78384 | opp_overlap 1616825, overlap 1616825 1616830 TTTTTCTTCATGATA CAACAAAAGATACCTCA TCAC TGAGATACCTTTTGTTA TTAGATAAAATCATC TERM 2004 1616856 - 1616825 - R 87 -11.8 -3.54475 | opp_overlap 1616825, overlap 1616822 1616830 TTCTTCATGATACAA CAAAAGATACCTCA TCAC TGAGATACCTTTTG TTATTAGATAAAATC TERM 2005 1616851 - 1616830 - R 78 -5.9 -4.85918 | opp_overlap 1616825, overlap 1616825 1616822 CATGATACAACAAAA GATACCTCA TCAC TGAGATACC TTTTGTTATTAGATA TERM 2006 1616950 - 1616971 + r 73 -5.7 -4.66833 | opp_overlap 1616950, overlap 1616952 GTCAAAAATGAAAAA GCCCACTGC ATAA GCAGAGGAC TTTTTAAACTTGAAA TERM 2007 1616971 - 1616950 - R 93 -7.9 -5.18355 | opp_overlap 1616950 1616952 GTCAAAAATGAAAAA GCCCACTGC ATAA GCAGAGGAC TTTTTAAACTTGAAA rpsO 1617256 - 1616987 - | 30S ribosomal protein S15 SpyM51639 1617569 - 1617414 - | hypothetical protein TERM 2008 1617441 - 1617454 + g 72 -4.5 -4.66163 | opp_overlap 1617434 1617441 ACTAGCAAGGCCAAA TAGCC AAGA GGCTG TTTTTAAATCAGAAT SpyM51640 1617695 - 1617964 + | putative DNA-binding protein TERM 2009 1618659 - 1618640 - g 74 -5 -4.68506 | AATCAATGCTAAAAA CCCCTTTG AAAC CAAAGAAG AGCTCTTGATTTTAG def 1618065 - 1618679 + | peptide deformylase TERM 2010 1618680 - 1618707 + T 87 -12.2 -3.2794 | opp_overlap 1618680, overlap 1618688 TTGATTTTAGACTAA CAAAAAAAGGCT AAAG GGCCTTTTTTTG TTAGTCTAAATAGCC TERM 2011 1618707 - 1618680 - T 84 -11.5 -3.27022 | opp_overlap 1618680 1618688 TTGATTTTAGACTAA CAAAAAAAGGC TAAAGG GCCTTTTTTTG TTAGTCTAAATAGCC TERM 2012 1618688 - 1618699 + T 90 -3.6 -5.85737 | opp_overlap 1618680, overlap 1618680 AGACTAACAAAAAAA GGCT AAAG GGCC TTTTTTTGTTAGTCT SpyM51642 1619255 - 1618713 - | putative NADPH-dependent FMN reductase SpyM51643 1619814 - 1619386 - | MarR family regulatory protein TERM 2013 1619654 - 1619633 - G 89 -10.3 -4.1673 | overlap 1619636 GAAGTCGCTAACAAA GAATCAATC AAGT GATTGATTC GCATACAGCCTTTAG TERM 2014 1619651 - 1619636 - G 71 -6.2 -4.20367 | overlap 1619633 GTCGCTAACAAAGAA TCAATC AAGT GATTGA TTCGCATACAGCCTT polC 1624321 - 1619924 - | DNA polymerase III PolC TERM 2015 1620327 - 1620339 + g 70 -3.4 -4.8622 | TTAACAGCATCTAAG CCAT CACTC ATGG TTTTTAATTCAAAAG TERM 2016 1620493 - 1620515 + g 74 -6.3 -4.4009 | opp_overlap 1620496 TTTTTCCACACGATT CAATGTACC AGTCG GGCACATTG TTTTCTCGCATGGCA TERM 2017 1622839 - 1622819 - G 71 -6.9 -4.08945 | ACTATCTTTGCAAAA GTCCTGAAA AGC TTTTAGGAC GGTAACCAATGGCTT TERM 2018 1624562 - 1624538 - R 100 -8.6 -4.80882 | gap 1, opp_overlap 1624538 AGTTCACAGCAAAAA GAGGCCGCTCT AAAC AG-GCAGCCTC TTCATTTCTTTTTTA drpA 1626431 - 1624575 - | prolyl-tRNA synthetase TERM 2019 1626579 - 1626546 - R 90 -12.6 -3.15544 | opp_overlap 1626546 TTTCATTTTGAGTAA GACCTCAACCCT TGCAAATCTT AGGGTTGAGGTC TTTTTCGATCTTTAA TERM 2020 1626546 - 1626579 + r 100 -12.6 -4.77986 | opp_overlap 1626546 TTTCATTTTGAGTAA GACCTCAACCCT TGCAAATCTT AGGGTTGAGGTC TTTTTCGATCTTTAA eep 1627888 - 1626629 - | putative pheromone-processing membrane metalloprotease TERM 2021 1627841 - 1627824 - G 70 -5.6 -4.48449 | TTAGCAAAATAGAAA TGTCCA AATTCA TGGACA ATCACTAAAATACCA SpyM51647 1628755 - 1627961 - | putative phosphatidate cytidylyltransferase TERM 2022 1628624 - 1628604 - G 77 -7.7 -4.16146 | opp_overlap 1628604 1628603 AAAACACCTTCAAAA GAAAAGACT TCT AATCTTTTC ATTTTCAGTAATTCT uppS 1629517 - 1628768 - | undecaprenyl pyrophosphate synthetase TERM 2023 1629463 - 1629484 + g 100 -10.2 -5.9003 | opp_overlap 1629462 TGATAATTCCAATAT GCTTTGGG ATACTC CCCAAAGC TTTTTTTGTTGATTT TERM 2024 1629566 - 1629581 + r 81 -4.6 -5.31456 | TATTTTATCATATTT CACGCC TTTT GGCTTG TTTTTTATCAATTAG TERM 2025 1629725 - 1629704 - R 88 -3.1 -5.83211 | gap 1, opp_overlap 1629704, overlap 1629697 GATCAAAACAAAAAA GTTTGGCATA TTT CAT-CCAAAC TTTCCCCGCCTTAAT TERM 2026 1629752 - 1629770 + r 70 -8.8 -2.99545 | overlap 1629749 TAATGGCTTTCAATG GCACTGCC AGT GTCAGTGC TATCTACTGTCTCAA yajC 1630101 - 1629736 - | preprotein translocase subunit YajC TERM 2027 1630012 - 1630023 + g 72 -3.6 -5.08831 | GTTTAACTGATTTTG GCGT TCTT GCGC TTGTTTTTTTTGTTG SpyM51650 1630564 - 1630217 - | hypothetical protein SpyM51651 1634203 - 1630706 - | putative surface-anchored pullulanase TERM 2028 1632576 - 1632587 + g 75 -5.8 -4.70626 | opp_overlap 1632576 1632574 GCTTCATAGATAATA GCGT CTTC ACGC TTTTTAAAGTTGTTA TERM 2029 1632655 - 1632666 + g 70 -5.8 -4.371 | overlap 1632654 TTGGATCAATAAAGG CAGC TTTT GCTG TTTTGATGTCATCAG TERM 2030 1634377 - 1634337 - R 73 -5.5 -4.63928 | gap 1, opp_overlap 1634342 1634344, overlap 1634338 1634342 ATAGGATCTCAAAAA TCAAACAGCCAAAACGAG TTTCCG CTCGCTT-GGCTGTTGGG TAAACTCAAATCACA TERM 2031 1634376 - 1634338 - R 73 -9 -3.37634 | gap 1, opp_overlap 1634342 1634344, overlap 1634337 1634342 TAGGATCTCAAAAAT CAAACAGCCAAAACGAG TTTCCG CTCGCTT-GGCTGTTGG GTAAACTCAAATCAC TERM 2032 1634372 - 1634342 - R 81 -8.4 -4.32649 | gap 1, opp_overlap 1634342 1634344, overlap 1634338 1634337 ATCTCAAAAATCAAA CAGCCAAAACGAG TTTCCG CTCGCTT-GGCTG TTGGGTAAACTCAAA dexB 1636014 - 1634401 - | glucan 1,6-alpha-glucosidase TERM 2033 1636091 - 1636134 + r 85 -12.8 -2.64912 | gap 1, opp_overlap 1636091 1636096 1636105, overlap 1636105 AATCGTTTGCGCAAA TGACA-TGATAAAAAGGTTGG AAC CCAACCTTTTTATCAATATCG CTTATACCTTAACGA TERM 2034 1636134 - 1636091 - R 95 -12.8 -3.53343 | gap 1, opp_overlap 1636091 1636105, overlap 1636096 1636105 AATCGTTTGCGCAAA TGACA-TGATAAAAAGGTTGG AAC CCAACCTTTTTATCAATATCG CTTATACCTTAACGA TERM 2035 1636128 - 1636096 - R 100 -19.5 -3.00525 | opp_overlap 1636091 1636105, overlap 1636091 1636105 TTTGCGCAAATGACA TGATAAAAAGGTTGG AAC CCAACCTTTTTATCA ATATCGCTTATACCT TERM 2036 1636119 - 1636105 - R 100 -10 -4.95758 | opp_overlap 1636091 1636105, overlap 1636096 1636091 ATGACATGATAAAAA GGTTGG AAC CCAACC TTTTTATCAATATCG TERM 2037 1636105 - 1636119 + r 100 -10 -4.89852 | opp_overlap 1636105 1636096 1636091, overlap 1636091 ATGACATGATAAAAA GGTTGG AAC CCAACC TTTTTATCAATATCG msmK 1637276 - 1636143 - | multiple sugar-binding transport ATP-binding protein TERM 2038 1637573 - 1637556 - R 100 -9.9 -5.18357 | opp_overlap 1637555 CAAGGCAGCAAAAAA GAAAGCC CTGT GGCTTTC CTAATATTTCAACAA lrp 1638422 - 1637574 - | leucine-rich protein TERM 2039 1638052 - 1638067 + g 76 -9 -3.76125 | ATTGAGATTGCTTGT CGGCAT AAAA ATGCCG TTTGGGTTGCACTGA TERM 2040 1640125 - 1640154 + r 84 -5.1 -5.26918 | opp_overlap 1640125 TAACTGACAAAAAAA GCAAGCAAC ACGCTATCAACA GTTGCTTGC TTTTTTCTAACCTCT TERM 2041 1640154 - 1640125 - R 100 -8.7 -5.66684 | gap 1, opp_overlap 1640125 TAACTGACAAAAAAA GCAAGCAACACGCT ATC AACA-GTTGCTTGC TTTTTTCTAACCTCT SpyM51657 1640625 - 1640182 - | D-tyrosyl-tRNA deacylase relA 1642871 - 1640640 - | GTP pyrophosphokinase TERM 2042 1642472 - 1642491 + g 73 -7.2 -4.09739 | gap 1, opp_overlap 1642471 TATCTTTGGACATAG CCATCAGCA TTT TGC-GATGG TTTTCGGCGAGTTGC TERM 2043 1643046 - 1643071 + r 88 -10.5 -3.91905 | opp_overlap 1643046, overlap 1643041 GCTCCCGACCAAAAA TAGAGAGAACC AAGG GGCTCTCTCTA TTATGTTTGCTTATC TERM 2044 1643071 - 1643046 - R 100 -12.7 -4.72272 | opp_overlap 1643046 1643041 GCTCCCGACCAAAAA TAGAGAGAACC AAGG GGCTCTCTCTA TTATGTTTGCTTATC scl 1643809 - 1643111 - | collagen-like surface protein TERM 2045 1644435 - 1644465 + G 89 -11.8 -3.67597 | overlap 1644436 GGAGAGTTTATTGCT GCCCATGGCAACGC CCA GCGTTGTCTTGGGA TTATTGGCTCAGGCA TERM 2046 1644436 - 1644464 + G 95 -15.3 -2.80344 | overlap 1644435 GAGAGTTTATTGCTG CCCATGGCAACGC CCA GCGTTGTCTTGGG ATTATTGGCTCAGGC TERM 2047 1644525 - 1644539 + G 73 -8.6 -3.62275 | opp_overlap 1644524 1644521 1644519 ACAGCCAAACAGTAT GCCAAA CGC TTTGGC TTTCCACTGCTAGGT SpyM51660 1644183 - 1644665 + | hypothetical protein TERM 2048 1644931 - 1644976 + T 100 -18.6 -3.29273 | opp_overlap 1644935, overlap 1644935 GGTTACTGACATGAC TAAAGAGGTCTAACCAGCTC TACCTT GAGCTCGTTAGACCTCTTTG TGTTCTCCTAATCCC TERM 2049 1644935 - 1644972 + T 100 -17.2 -4.29304 | opp_overlap 1644935, overlap 1644931 ACTGACATGACTAAA GAGGTCTAACCAGCTC TACCTT GAGCTCGTTAGACCTC TTTGTGTTCTCCTAA TERM 2050 1644972 - 1644935 - T 100 -17.2 -3.82218 | opp_overlap 1644935 1644931 ACTGACATGACTAAA GAGGTCTAACCAGCTC TACCTT GAGCTCGTTAGACCTC TTTGTGTTCTCCTAA SpyM51661 1645876 - 1645058 - | endonuclease/exonuclease/phosphatase family protein SpyM51662 1648145 - 1645959 - | PTS system, glucose-specific IIABC component TERM 2051 1648454 - 1648429 - R 90 -3.9 -5.87996 | opp_overlap 1648429 1648446 1648447 GAAGCAATAAAAAAA GGCCGTTGACA CAAT CGTGAACTGCC TGTTCGTTTCTTTAG TERM 2052 1648482 - 1648502 + r 75 -6.9 -4.2828 | opp_overlap 1648485, overlap 1648485 TAGCCTCTTCTTTCT AAAGTAAGC ACA GCTTACTTA TTTTGATGCCTGCAA TERM 2053 1648485 - 1648499 + r 83 -8.6 -4.26327 | opp_overlap 1648485, overlap 1648482 CCTCTTCTTTCTAAA GTAAGC ACA GCTTAC TTATTTTGATGCCTG TERM 2054 1648499 - 1648485 - R 75 -8.6 -3.53012 | opp_overlap 1648485 1648482 CCTCTTCTTTCTAAA GTAAGC ACA GCTTAC TTATTTTGATGCCTG SpyM51663 1649249 - 1648500 - | hypothetical protein prmA 1650202 - 1649249 - | ribosomal protein L11 methyltransferase SpyM51665 1650743 - 1650273 - | hypothetical protein SpyM51666 1650916 - 1652889 + | putative surface-anchored amidase TERM 2055 1653291 - 1653312 + G 73 -7.3 -4.13767 | opp_overlap 1653290 1653293 CCCATAATGACAGAC TAGGCAACG AGTA CCTTGCCTA TTTTACAGTGCACAA SpyM51667 1653074 - 1654831 + | putative chorismate binding enzyme TERM 2056 1655087 - 1655077 - g 79 -5.4 -4.93877 | TTTTACCAAACAAAA CCTA TCT TAGG AGTGTGTCTGGGACA trpG 1654864 - 1655430 + | anthranilate synthase component II SpyM51669 1655463 - 1656731 + | recombination factor protein RarA TERM 2057 1657123 - 1657110 - f 86 -5.3 -5.24989 | opp_overlap 1657110 CTATACATGAAAAAA CCTTT GTTT AAAGG CTTTTTTTGCTTGTC SpyM51670 1657230 - 1657670 + | acetyltransferase (GNAT) family protein SpyM51671 1657725 - 1658231 + | topology modulation protein TERM 2058 1658268 - 1658287 + F 73 -5.8 -4.42464 | gap 1, opp_overlap 1658251 1658285, overlap 1658285 ACCACGGGTAATCCG GGCTATTCA GAC TGAA-AGCC TTTGTTTAAAGGCTT TERM 2059 1658300 - 1658285 - f 72 -7.6 -3.71873 | opp_overlap 1658268 1658285 CTATTCAGACTGAAA GCCTTT GTTT AAAGGC TTTTTTGCTTGTTTC TERM 2060 1658285 - 1658300 + F 95 -7.6 -5.4148 | opp_overlap 1658285, overlap 1658268 CTATTCAGACTGAAA GCCTTT GTTT AAAGGC TTTTTTGCTTGTTTC smeZ 1658480 - 1659181 + | mitogenic exotoxin Z precursor dppA 1659910 - 1661544 + | dipeptide-binding extracellular protein TERM 2061 1662452 - 1662464 + G 82 -7.7 -4.52047 | overlap 1662448 TTTGGAGGATCTGTT CTTGC TGA GCAAG TTTTCTCATATCCTG dppB 1661657 - 1662634 + | dipeptide transport system permease protein DppB TERM 2062 1662765 - 1662809 + G 80 -10.9 -3.3353 | opp_overlap 1662777, overlap 1662762 1662777 TTTACGCAACCTCGC TCCTTCCTTAAACCATCTTTT TGG GACAGATGGTTTAGGTAGGGA TATGTTTGTCAGAAC dppC 1662631 - 1663452 + | dipeptide transport system permease protein DppC dppD 1663464 - 1664267 + | dipeptide transport system ATP-binding protein DppD dppE 1664251 - 1664877 + | dipeptide transport system ATP-binding protein DppF TERM 2063 1664926 - 1664957 + T 95 -11.2 -4.47007 | gap 1, opp_overlap 1664926 1664934, overlap 1664926 1664934 AACAAAATCACACCA TTAAAAAA-CCAGCT TAC AGCTGGTTTTTTTAA TTATTTTAATTTTTC TERM 2064 1664956 - 1664926 - T 86 -12.8 -2.77512 | opp_overlap 1664926 1664926 1664934, overlap 1664934 AACAAAATCACACCA TTAAAAAACCAGCT TAC AGCTGGTTTTTTTA ATTATTTTAATTTTT TERM 2065 1664926 - 1664956 + T 90 -12.8 -3.25764 | opp_overlap 1664926 1664934, overlap 1664926 1664934 AACAAAATCACACCA TTAAAAAACCAGCT TAC AGCTGGTTTTTTTA ATTATTTTAATTTTT TERM 2066 1664948 - 1664934 - T 100 -10 -5.20216 | opp_overlap 1664926 1664926 1664934, overlap 1664926 CACACCATTAAAAAA CCAGCT TAC AGCTGG TTTTTTTAATTATTT TERM 2067 1664934 - 1664948 + T 100 -10 -5.73672 | opp_overlap 1664934 1664926, overlap 1664926 1664926 CACACCATTAAAAAA CCAGCT TAC AGCTGG TTTTTTTAATTATTT SpyM51678 1665158 - 1664958 - | CsbD-like protein TERM 2068 1665127 - 1665137 + g 71 -4 -4.86293 | CCACCAGATGCTTGC TCAA TTT TTGA TTTTAATTTTTCTTC SpyM51679 1667798 - 1665327 - | streptococcal histidine triad protein TERM 2069 1666307 - 1666331 + g 75 -2.9 -5.33026 | overlap 1666308 TTGTTACTTTGCGAC TCACTTTTTTA GTG TCAAAGAGTGG TTTTTCTTTGCCTTG TERM 2070 1667325 - 1667335 + g 73 -5.4 -4.62669 | overlap 1667330 AGTTCCTTTGGCTAC TTGC TCA GCAA TTTGTTGTTTGGTTC lmb 1668731 - 1667811 - | laminin binding protein TERM 2071 1667874 - 1667898 + g 79 -11.5 -2.65274 | overlap 1667873 TAGATATGTCTTGTT TCCGCTTGGAG CAG CTTCAAGTGGA CTTAATGTCTTTACT TERM 2072 1668364 - 1668389 + g 89 -10.5 -4.14392 | TCCATATCTTCTAGC CCTTTGACTCT ATCT AGTGTCAAAGG TTTTGACGCTTCAAA TERM 2073 1668409 - 1668419 + g 85 -4 -5.53288 | opp_overlap 1668409 GACGCTTCAAACACA TCAA CCT TTGA TTTTTTTAAATTAGG TERM 2074 1668963 - 1668937 - R 100 -16.8 -5.76633 | opp_overlap 1668937 1668939 1668941 1668943 GCACATATAAAAAAA TAGAGAGAACCA AAT TGGTTCTCTCTA TTAAATAAGCTCTTA TERM 2075 1668937 - 1668963 + r 100 -16.8 -3.0792 | opp_overlap 1668937, overlap 1668939 1668941 1668943 GCACATATAAAAAAA TAGAGAGAACCA AAT TGGTTCTCTCTA TTAAATAAGCTCTTA TERM 2076 1668939 - 1668961 + r 100 -15 -3.09505 | opp_overlap 1668937, overlap 1668937 1668941 1668943 ACATATAAAAAAATA GAGAGAACCA AAT TGGTTCTCTC TATTAAATAAGCTCT TERM 2077 1668941 - 1668959 + r 83 -11.8 -3.10522 | opp_overlap 1668937, overlap 1668939 1668937 1668943 ATATAAAAAAATAGA GAGAACCA AAT TGGTTCTC TCTATTAAATAAGCT TERM 2078 1668943 - 1668957 + r 70 -8.6 -3.11072 | opp_overlap 1668937, overlap 1668941 1668939 1668937 ATAAAAAAATAGAGA GAACCA AAT TGGTTC TCTCTATTAAATAAG scpA 1672446 - 1668994 - | C5A peptidase precursor TERM 2079 1669572 - 1669583 + g 70 -3.6 -5.00138 | TACGCTCACGGTAAA CCGG TTGG CTGG TTTTTGGTTTAGATG TERM 2080 1672519 - 1672498 - R 100 -11.7 -4.73613 | opp_overlap 1672502 TGACCATTAAGAAAA GAGAGAATC AAAC GATTCTCTC CTAGCTGTCCATCTG TERM 2081 1672701 - 1672682 - R 93 -3.6 -5.9873 | overlap 1672662 TTATTATAAAAAAAA GACGTTTA TTAG TAAAGGTC AGCTTTTTAAGAGTT TERM 2082 1672761 - 1672782 + r 95 -13.1 -3.38072 | opp_overlap 1672761 CTTCTATACATAAAA GAGAGAACC GACT GGTTCTCTC TTGATGTTCACTCAG TERM 2083 1672782 - 1672761 - R 100 -13.1 -4.60797 | opp_overlap 1672761 CTTCTATACATAAAA GAGAGAACC GACT GGTTCTCTC TTGATGTTCACTCAG emm5 1674293 - 1672815 - | M protein, serotype 5 precursor TERM 2084 1673658 - 1673671 + g 77 -5.3 -4.91977 | GGTTTCTTTATTTTC TTGCT CCTT AGCAA TTTTATCTTTTACTG TERM 2085 1673733 - 1673746 + g 77 -5.3 -4.91977 | GGTTTCTTTATTTTC TTGCT CCTT AGCAA TTTTATCTTTTACTG TERM 2086 1674226 - 1674242 + g 85 -2.9 -5.81622 | opp_overlap 1674224 1674220, overlap 1674224 1674226 1674228 ACACTCAAAGCTACT GCTACTG ATG CAGTGCC TTTTTTTAATTTTCT TERM 2087 1676066 - 1676088 + H 91 -9.8 -4.69326 | overlap 1676068 TGCTGAGTTCTTTAT CCTTGACGCC AAT GGCGTCAGCG TTTTCTGTTACGTAT TERM 2088 1676068 - 1676086 + H 78 -11 -2.63584 | overlap 1676066 CTGAGTTCTTTATCC TTGACGCC AAT GGCGTCAG CGTTTTCTGTTACGT SpyM51684 1676532 - 1676726 + | hypothetical protein TERM 2089 1676813 - 1676776 - T 100 -10.9 -5.9362 | opp_overlap 1676775 1676776 CAAAAGACAAAAAAA CTTCCAATAACTTAG CTTGCGCT CTAAATTATTGGAAG ATTATTTGACCTATT TERM 2090 1676776 - 1676813 + T 70 -8.7 -2.97146 | opp_overlap 1676776, overlap 1676775 CAAAAGACAAAAAAA CTTCCAATAACTTAG CTTGCGCT CTAAATTATTGGAAG ATTATTTGACCTATT SpyM51685 1677083 - 1676832 - | hypothetical protein isp 1678789 - 1677161 - | immunogenic secreted protein TERM 2091 1677732 - 1677745 + g 84 -2.3 -5.72207 | ATCAAGGTATCCAAC TGGCC TAGT GACCA TTTTTTTGCTTTGAG SpyM51687 1680279 - 1678891 - | sensor histidine kinase SpyM51688 1680929 - 1680276 - | response regulator protein TERM 2092 1680320 - 1680337 + g 89 -5.5 -5.40474 | TGCCTGTAATTGTCT TGAGGGG AATA CCCGTCA TTTTTTTACGAAGGT TERM 2093 1680973 - 1680994 + r 80 -5.9 -4.89729 | gap 1, opp_overlap 1680973, overlap 1680981 GTATCAAGCAGCTAA GGATGACATC AAA GG-GTCATCC TTTTTGACTTTTATG SpyM51689 1682240 - 1681023 - | ABC transporter permease TERM 2094 1681929 - 1681943 + g 73 -7.8 -3.80189 | opp_overlap 1681928 ACCATATGAGATCAG GGCGTT TTT GACGCC TTTGACTTGCTGTAT SpyM51690 1682927 - 1682253 - | ABC transporter ATP-binding protein SpyM51691 1684182 - 1682914 - | hypothetical protein TERM 2095 1683270 - 1683285 + g 70 -3.2 -4.85177 | GGTCATTGCCACCTT GGCC TTGACCTT GGCC TTTTTCCTCTGCTTT TERM 2096 1684477 - 1684440 - R 77 -2.8 -5.45802 | opp_overlap 1684435 1684440 TTTGGAAAACAAAAA TCATATAACCGTTC GCTCACATAA GCACGGGTATATGA TTTTGTACATTTGCG SpyM51692 1684890 - 1684606 - | hypothetical protein SpyM51693 1685333 - 1685037 - | hypothetical protein TERM 2097 1685494 - 1685504 + H 72 -4 -4.98255 | TTGTTTTGTGACCTT GATT TTT AATC TTTTTCTCCTTAAAA SpyM51694 1685577 - 1685813 + | hypothetical protein TERM 2098 1685901 - 1685866 - T 100 -16.3 -2.65264 | opp_overlap 1685866 CTATCACTGATACCA TTCACGCTAAGCCTC ATTCTA GGGGCTTAGCGTGAA TTTTTTTGCTGACTG TERM 2099 1685866 - 1685901 + T 100 -18.5 -5.53991 | opp_overlap 1685866 CTATCACTGATACCA TTCACGCTAAGCCTC ATTCTA GGGGCTTAGCGTGAA TTTTTTTGCTGACTG TERM 2100 1685927 - 1685964 + T 89 -10.8 -3.92522 | opp_overlap 1685928 1685929 1685933, overlap 1685917 1685928 1685933 GACTGGTTTTTAAAT ATTAAAGACTCTATCC TTATTT GGATAGAGTCTTTAGC TTTATGACATTGCCC TERM 2101 1685963 - 1685928 - T 89 -12.1 -3.34517 | opp_overlap 1685917 1685927 1685928 1685933, overlap 1685929 1685933 ACTGGTTTTTAAATA TTAAAGACTCTATCC TTATTT GGATAGAGTCTTTAG CTTTATGACATTGCC TERM 2102 1685928 - 1685963 + T 100 -14.3 -2.95192 | opp_overlap 1685928 1685929 1685933, overlap 1685917 1685927 1685933 ACTGGTTTTTAAATA TTAAAGACTCTATCC TTATTT GGATAGAGTCTTTAG CTTTATGACATTGCC TERM 2103 1685962 - 1685929 - T 100 -15.6 -2.60496 | opp_overlap 1685917 1685928 1685927 1685933, overlap 1685928 1685933 CTGGTTTTTAAATAT TAAAGACTCTATCC TTATTT GGATAGAGTCTTTA GCTTTATGACATTGC TERM 2104 1685958 - 1685933 - T 93 -12 -4.00532 | opp_overlap 1685917 1685928 1685927 1685933, overlap 1685929 1685928 TTTTTAAATATTAAA GACTCTATCC TTATTT GGATAGAGTC TTTAGCTTTATGACA TERM 2105 1685933 - 1685958 + T 93 -12 -3.89215 | opp_overlap 1685933 1685929 1685928, overlap 1685917 1685928 1685927 TTTTTAAATATTAAA GACTCTATCC TTATTT GGATAGAGTC TTTAGCTTTATGACA prsA2 1687015 - 1686086 - | foldase protein PrsA SpyM51696 1687388 - 1687071 - | hypothetical protein TERM 2106 1687302 - 1687256 - G 71 -5.3 -4.64144 | gap 1, opp_overlap 1687264, overlap 1687264 AATAACTCTCAAAAA TCGTAAAAGGACTGAGTCCCAT CTCT ACAGAACTCAGTCC-TTTACCT TGGCATCTTAGGGAA TERM 2107 1687295 - 1687264 - G 100 -12.4 -4.31329 | opp_overlap 1687264, overlap 1687256 TCAAAAATCGTAAAA GGACTGAGTCCCAT CTCT ACAGAACTCAGTCC TTTACCTTGGCATCT TERM 2108 1687472 - 1687485 + r 72 -8.1 -3.55761 | TAAACGAGTGGTGAG GGAGC AAAA GCTCC TTTGACCGATCAATC SpyM51697 1687800 - 1687495 - | hypothetical protein speB 1688998 - 1687802 - | streptopain precursor SpyM51699 1689440 - 1689270 - | hypothetical protein SpyM51700 1689524 - 1689655 + | hypothetical protein TERM 2109 1690510 - 1690521 + G 70 -3 -5.09762 | CGATTCGGATGTTTG TCAA TATG TTGA TTTTGTTTATTCAGC ropB 1689939 - 1690781 + | transcriptional regulator TERM 2110 1690795 - 1690817 + T 80 -6.3 -5.02715 | opp_overlap 1690795 GAGGCTCTTTAAAAA GCTAACGCT CTTAT GGTGTTAGC TTTTTGATTTGGTAT TERM 2111 1690915 - 1690934 + T 82 -6.5 -5.02201 | opp_overlap 1690907 1690915, overlap 1690909 GACAAATCATAAAAA GCAATGA CGGCAA TCATTGC TTTTTCTAGTATTTT TERM 2112 1690934 - 1690915 - T 85 -7.2 -5.06735 | opp_overlap 1690915 1690909, overlap 1690907 GACAAATCATAAAAA GCAATGAC GGCA ATCATTGC TTTTTCTAGTATTTT sdbII 1691837 - 1691022 - | streptococcal phage-like DNAse SpyM51703 1692201 - 1692710 + | hypothetical protein TERM 2113 1692750 - 1692712 - T 100 -17 -3.01329 | opp_overlap 1692717, overlap 1692717 CCAACCAACAATAAG TAAAACAAGTCTAGGAAG TGA CTCCCTAGACTTGTTTTT TTGAGGTTATCTGGC TERM 2114 1692717 - 1692745 + T 100 -14.7 -5.48303 | opp_overlap 1692712 1692717 CAACAATAAGTAAAA CAAGTCTAGGAAG TGA CTCCCTAGACTTG TTTTTTTGAGGTTAT TERM 2115 1692745 - 1692717 - T 100 -16.9 -4.61824 | opp_overlap 1692717, overlap 1692712 CAACAATAAGTAAAA CAAGTCTAGGAAG TGA CTCCCTAGACTTG TTTTTTTGAGGTTAT gldA 1693880 - 1692792 - | glycerol dehydrogenase TERM 2116 1693121 - 1693107 - G 72 -8.6 -3.54424 | TGTCAGCGCTGTAAA GCCATT GTG AATGGC ATGTGCAGCAGCCAG fsa 1694605 - 1693937 - | fructose-6-phosphate aldolase pflD 1697035 - 1694618 - | putative formate acetyltransferase TERM 2117 1694907 - 1694929 + g 70 -7.8 -3.68529 | overlap 1694895 CCTCCGACAATCTCA TCTGTTGGTA ATT TAGCAACAGA TTTCAATACTGAAGT TERM 2118 1695526 - 1695547 + g 77 -6.5 -4.5774 | TGCGGGTAATTTCGC GCAGGGTGG CATC CCATGCTGC TTTTAATTCTTCATA TERM 2119 1695945 - 1695964 + g 73 -2.1 -5.26918 | gap 1, overlap 1695949 CTTAGGACAAGGTAA GACAGTGG GTTGA CCGC-GTC TTTTTTATCGCGTGT TERM 2120 1696326 - 1696342 + g 72 -8.7 -3.48772 | GCTTGACGTTCTGGA CTAGCGG TTT CTGCTAG TTCTCTAGCCAACTT TERM 2121 1697219 - 1697200 - R 78 -5.7 -5.00616 | CCTTTTTCTAAAAAA CCACCTC TAACTG GAGATGG TCTCAAGAATTTGTG SpyM51707 1698550 - 1697246 - | PTS system, cellobiose-specific IIC component SpyM51708 1698868 - 1698560 - | sugar phosphotransferase system (PTS),lactose/cellobiose-specific family IIB protein SpyM51709 1699216 - 1698896 - | sugar phosphotransferase system (PTS),lactose/cellobiose-specific family IIA protein TERM 2122 1699469 - 1699448 - R 87 -2.2 -5.99154 | gap 1, opp_overlap 1699460 CATCAAACAAAAAAA GCCC-TGAC GTTTG GTCTTGGGC CTCTATAAATATCAT SpyM51710 1700483 - 1699503 - | putative sugar-binding regulatory protein SpyM51711 1701245 - 1700499 - | DeoR family regulatory protein TERM 2123 1700759 - 1700726 - G 70 -8.4 -3.32997 | gap 1, overlap 1700728 TGCCCATAAAGCCAA GATCTTTGTTGAAAC CGTCT GTTCCAACAAAGA-C ACGATTGACATGAAA TERM 2124 1700758 - 1700728 - G 83 -12.1 -3.23047 | overlap 1700726 CCCATAAAGCCAAGA TCTTTGTTGAAAC CGTCT GTTCCAACAAAGA CACGATTGACATGAA SpyM51712 1701371 - 1702144 + | putative pyruvate formate-lyase activating enzyme TERM 2125 1702248 - 1702287 + T 100 -14.6 -3.31625 | overlap 1702243 TGCCTTTACCTTTAT GCTTTTTTAAAGCTCAAA CCAG TATGGGCTTTAAAAAAGC TTACTAATTAGTTTA TERM 2126 1702338 - 1702319 - T 100 -13.6 -5.34555 | opp_overlap 1702315 TGATACTACAAAAAA GGCTGGGA ATAC TCCCAGCC TAGGCTTTTCCAAGC secE 1702557 - 1702381 - | preprotein translocase subunit SecE rpmG 1702723 - 1702571 - | 50S ribosomal protein L33 TERM 2127 1702600 - 1702618 + g 79 -6.8 -4.59982 | TGTGTAAGGTATATG TTTTGCAG TAT TTGCAAAA TTTATTTACTTCTAG pbp2A 1705108 - 1702772 - | penicillin-binding protein 2a TERM 2128 1704117 - 1704127 + g 70 -3.2 -4.9138 | AGCCCTACTGCTCTA GCTT GCT GAGC TTTTGTTTGGGTAAT TERM 2129 1705017 - 1705029 + g 76 -3.3 -5.18357 | overlap 1705018 TTTTGATTGTGTTGT GGCGT TAA ACGCG TTTTTTGATGCATTA SpyM51716 1705527 - 1705147 - | hypothetical protein SpyM51716A 1706018 - 1706209 + | hypothetical protein SpyM51717 1706286 - 1707104 + | RNA pseudouridylate synthase TERM 2130 1707123 - 1707083 - T 100 -14.9 -3.57792 | opp_overlap 1707085 1707092, overlap 1707084 1707092 TGACGCAGTCTTAAA CGCTCAAAAGGCTAGGAAA TAA TCTCCTAGCCTTTTGAGTT TATCTGTTTTCATAG TERM 2131 1707122 - 1707084 - T 100 -18.4 -2.74461 | opp_overlap 1707085 1707092, overlap 1707083 1707092 GACGCAGTCTTAAAC GCTCAAAAGGCTAGGAAA TAA TCTCCTAGCCTTTTGAGT TTATCTGTTTTCATA TERM 2132 1707085 - 1707121 + T 100 -19.7 -4.34859 | opp_overlap 1707084 1707083 1707092, overlap 1707092 ACGCAGTCTTAAACG CTCAAAAGGCTAGGAAA TAA TCTCCTAGCCTTTTGAG TTTATCTGTTTTCAT TERM 2133 1707114 - 1707092 - T 95 -12.8 -4.17089 | opp_overlap 1707092 1707085, overlap 1707084 1707083 CTTAAACGCTCAAAA GGCTAGGAAA TAA TCTCCTAGCC TTTTGAGTTTATCTG TERM 2134 1707092 - 1707114 + T 95 -10.6 -4.41177 | opp_overlap 1707084 1707083 1707092, overlap 1707085 CTTAAACGCTCAAAA GGCTAGGAAA TAA TCTCCTAGCC TTTTGAGTTTATCTG SpyM51718 1708833 - 1707193 - | hypothetical protein SpyM51719 1709080 - 1710579 + | putative dipeptidase TERM 2135 1710567 - 1710555 - T 70 -3.4 -4.93595 | AGAAAAACCCAAAAA CAAG AAAGG CTTG AATAGATCATAATAC TERM 2136 1710669 - 1710643 - T 100 -16.8 -5.15969 | opp_overlap 1710646 GCTGAAGTCAAAAAA TAAGGTCTCACA CTT TGTGAGACCTTA TCGGTATAGGAGGGG TERM 2137 1710646 - 1710666 + T 100 -14.1 -3.39327 | opp_overlap 1710643 GAAGTCAAAAAATAA GGTCTCACA CTT TGTGAGACC TTATCGGTATAGGAG TERM 2138 1711669 - 1711711 + T 79 -5 -5.1861 | opp_overlap 1711672, overlap 1711672 ATATCACAACTAAAA AAACAAAGATGGGATATC ATGAGTC GAAATCCAATCTTTGTTC TTTTTTCATAGTAAG TERM 2139 1711708 - 1711672 - T 100 -7.4 -5.68023 | opp_overlap 1711672 1711669 TCACAACTAAAAAAA CAAAGATGGGATATCA TGAGT CGAAATCCAATCTTTG TTCTTTTTTCATAGT TERM 2140 1711672 - 1711708 + T 78 -6.7 -4.68456 | opp_overlap 1711672, overlap 1711669 TCACAACTAAAAAAA CAAAGATGGGATATC ATGAGTC GAAATCCAATCTTTG TTCTTTTTTCATAGT groEL 1713412 - 1711781 - | chaperonin GroEL TERM 2141 1713031 - 1713048 + g 70 -9.9 -2.6462 | overlap 1713012 1713030 1713028 1713034 TGGCTTTCAAGGCTT CAACAGC TGTT GCTGTTG CTGTTTCAATGCCTC groES 1713738 - 1713448 - | co-chaperonin GroES TERM 2142 1713769 - 1713805 + r 100 -13.4 -3.59658 | gap 1, opp_overlap 1713763 1713773, overlap 1713773 TAAAAGAATCTTTAG TAAAGTTAGCACTC-AT GTTC ATCGAGTGCTAACTTTA TATTCTATTTTATCA TERM 2143 1713773 - 1713801 + r 91 -9.8 -4.3821 | gap 1, opp_overlap 1713773, overlap 1713769 AGAATCTTTAGTAAA GTTAGCACTC-AT GTTC ATCGAGTGCTAAC TTTATATTCTATTTT TERM 2144 1713801 - 1713773 - R 84 -9.8 -3.75015 | gap 1, opp_overlap 1713773 1713769 AGAATCTTTAGTAAA GTTAGCACTC-AT GTTC ATCGAGTGCTAAC TTTATATTCTATTTT TERM 2145 1713847 - 1713872 + r 81 -4.1 -5.52986 | opp_overlap 1713847, overlap 1713850 ATAGTCAAGAAAAAA GAAGTTATTTT TGTA AGAATAACCTC TTTTTTTGGTGACAT TERM 2146 1713872 - 1713847 - R 81 -4.1 -5.49234 | opp_overlap 1713847 1713850 ATAGTCAAGAAAAAA GAAGTTATTTT TGTA AGAATAACCTC TTTTTTTGGTGACAT clpC 1716360 - 1713916 - | putative stress response-related Clp ATPase TERM 2147 1715030 - 1715040 + g 81 -5.4 -5.04987 | ATTGGTGTTAAAGTC TCAG GTG CTGA TTTTTTCACCATGTT ctsR 1716821 - 1716360 - | transcriptional regulator TERM 2148 1716992 - 1716969 - R 100 -9.6 -5.42514 | opp_overlap 1716964 1716969 GTAGAAATCAAAAAA GCAGTTGTTG TTTC CAACATCTGC TTCTCTTTAGTTACT TERM 2149 1716969 - 1716992 + r 83 -9.6 -3.90901 | opp_overlap 1716969, overlap 1716964 GTAGAAATCAAAAAA GCAGTTGTTG TTTC CAACATCTGC TTCTCTTTAGTTACT csp 1717220 - 1717017 - | cold shock protein TERM 2150 1717448 - 1717425 - H 72 -7.5 -3.76125 | overlap 1717428 CTATGGTAAGGTAAA CAAGTAGAG ATTCAA CTCTACTCG CTCTCACATCACCGT TERM 2151 1717711 - 1717675 - H 91 -6 -5.75538 | gap 1, opp_overlap 1717675 1717674, overlap 1717669 CGCAAAAAATAAAAA CCTTGATTTAACAACGT TTTC ACGAAGTTAA-TCAAGG CTTGTTTTGTATATA ahpC 1718205 - 1718765 + | alkyl hydroperoxide reductase subunit C ahpF 1718786 - 1720318 + | NADH dehydrogenase TERM 2152 1720326 - 1720371 + T 100 -10.7 -5.02074 | opp_overlap 1720335, overlap 1720335 GTCAATAAAACAGCA TATTTAAAAGAAGTTTTGAGC TAAC GCTCAAAGCTTCTTTTTGAAA TTTTTTAAAGAATAC TERM 2153 1720362 - 1720335 - T 91 -11.4 -4.2535 | opp_overlap 1720335 1720326 ACAGCATATTTAAAA GAAGTTTTGAGC TAAC GCTCAAAGCTTC TTTTTGAAATTTTTT TERM 2154 1720335 - 1720362 + T 100 -13.6 -4.77925 | opp_overlap 1720335, overlap 1720326 ACAGCATATTTAAAA GAAGTTTTGAGC TAAC GCTCAAAGCTTC TTTTTGAAATTTTTT hutI 1721641 - 1720376 - | imidazolonepropionase hutU 1721932 - 1723962 + | urocanate hydratase SpyM51730 1724050 - 1724949 + | glutamate formiminotransferase SpyM51731 1724960 - 1725586 + | formiminotetrahydrofolate cyclodeaminase fhs2 1725604 - 1727277 + | formate--tetrahydrofolate ligase TERM 2155 1727880 - 1727840 - g 71 -7.6 -3.90112 | gap 1, opp_overlap 1727844 1727845 1727875, overlap 1727843 TTTGCCCCAATCAAA CAAGCCCCGCCCAAACTCC AGTA GCTGTTTGGGCAGG-CTTA TGGTATAAGACTTAG TERM 2156 1727877 - 1727843 - g 73 -7.1 -4.0825 | gap 1, opp_overlap 1727844 1727845 1727875, overlap 1727840 GCCCCAATCAAACAA GCCCCGCCCAAACTCC AGTA GCTGTTTGGGCAGG-C TTATGGTATAAGACT SpyM51733 1727299 - 1727895 + | hypothetical protein SpyM51734 1728115 - 1729458 + | amino acid permease TERM 2157 1730237 - 1730215 - g 71 -7.6 -3.86346 | CCATTCGCCCACAAA GCGGCCAGTT GGC AACAGCCCGC AATATCCGAAACCTC hutH 1729470 - 1731011 + | histidine ammonia-lyase hutG 1731197 - 1732183 + | formimidoylglutamase TERM 2158 1732238 - 1732207 - T 78 -10.3 -3.09749 | opp_overlap 1732212, overlap 1732212 GATTCGCAACATAGA TAAAACCCTCTGA TTCACT TCAGAGGGTTTTC CTTAGCTTTTAGCAG TERM 2159 1732212 - 1732233 + T 91 -10.2 -4.48175 | opp_overlap 1732207 1732212 GCAACATAGATAAAA CCCTCTGA TTCACT TCAGAGGG TTTTCCTTAGCTTTT TERM 2160 1732233 - 1732212 - T 91 -10.2 -4.68124 | opp_overlap 1732212, overlap 1732207 GCAACATAGATAAAA CCCTCTGA TTCACT TCAGAGGG TTTTCCTTAGCTTTT SpyM51737 1735314 - 1732240 - | putative transcriptional activator protein TERM 2161 1732877 - 1732897 + g 73 -8.3 -3.6502 | opp_overlap 1732884 AAGTCAATCGACTGT TGAAGCAGA CGC TCTGCCTCA TTTAACTCCCCAATA TERM 2162 1735523 - 1735546 + H 75 -7.4 -4.33165 | TCCAATGTTCAATAG CAGCGACTTC TTTA GGGGTCGTTG TTTTGGTACCTTTAG TERM 2163 1735600 - 1735640 + H 100 -18.4 -3.14211 | TTATGGTTTTCGTTA GTGCCTCTCTCCCATGAC GCATA GGGATGGGAGAGAGGCAC TTACTGGAACGACAT TERM 2164 1736430 - 1736446 + H 70 -2.9 -5.18357 | opp_overlap 1736433, overlap 1736416 1736431 1736433 TGGTGAACTACAAGT ATACCTC TTA GAGGTGC TTTTTTCATACCTTA TERM 2165 1736939 - 1736921 - g 74 -3.9 -5.14563 | gap 1, opp_overlap 1736925, overlap 1736925 1736936 GTTGGTACTAAAAAA CAAGCTGC TGAA GCAG-TTG CTGACGAAGCAACGC TERM 2166 1737107 - 1737095 - g 71 -6.3 -4.15044 | GTTCTTCCTAAGAAA GAAGT TGC ACTTC TTAACAAACAACGCG TERM 2167 1737245 - 1737233 - g 76 -3.3 -5.23016 | opp_overlap 1737242 AAAGAAGCTAAAAAA CTTGG TAT CCCAG TCGTAGCGATGGTTG rpsB 1736699 - 1737466 + | 30S ribosomal protein S2 TERM 2168 1737586 - 1737574 - f 71 -4.9 -4.54727 | TTTTTGAAACCAAAA CAAAT ATC ATTTG GAGGATACTACACAT TERM 2169 1738411 - 1738390 - g 78 -2.9 -5.42265 | overlap 1738380 1738391 GCAAACCAGAAAAAA TCTGGGACA AAAT CATCCCAGG TAAAATGGACCGCTT tsf 1737600 - 1738640 + | elongation factor Ts TERM 2170 1738668 - 1738693 + T 93 -7.6 -5.24796 | opp_overlap 1738668 1738670 GATAAGTCTAAAAAA GGCAACCTTC TTTCCT GAGGGTTGTC TTTTTGTTGTGTCAA TERM 2171 1738693 - 1738668 - T 73 -3.2 -5.11033 | opp_overlap 1738668, overlap 1738670 GATAAGTCTAAAAAA GGCAACCTTC TTTCCT GAGGGTTGTC TTTTTGTTGTGTCAA TERM 2172 1738733 - 1738763 + T 78 -5.4 -4.91109 | opp_overlap 1738736, overlap 1738734 1738736 CAATAAGGAAGCAAA AAACTGATCCTGTG TTT CACAGAATCAGTCA TTTTTATAATCACAA TERM 2173 1738734 - 1738762 + T 75 -8.9 -3.54183 | opp_overlap 1738736, overlap 1738733 1738736 AATAAGGAAGCAAAA AACTGATCCTGTG TTT CACAGAATCAGTC ATTTTTATAATCACA TERM 2174 1738760 - 1738736 - T 100 -13.7 -5.32565 | opp_overlap 1738736 1738734 1738733 TAAGGAAGCAAAAAA CTGATCCTGTG TTT CACAGAATCAG TCATTTTTATAATCA TERM 2175 1738736 - 1738760 + T 85 -11.5 -3.34102 | opp_overlap 1738736, overlap 1738734 1738733 TAAGGAAGCAAAAAA CTGATCCTGTG TTT CACAGAATCAG TCATTTTTATAATCA pepO 1740701 - 1738806 - | putative endopeptidase O TERM 2176 1739967 - 1739953 - G 77 -6.4 -4.57341 | overlap 1739954 AATTCTGTCCAAAAA CGTTCC TCA GGAACA ATAACCTTGTCAGGT TERM 2177 1740911 - 1740873 - R 100 -16.2 -3.28712 | opp_overlap 1740876 1740882, overlap 1740876 1740882 CTTTTTTCGTGACAA TCACCAAAAGCCTGAGGC CTA ACCTCAGGCTTTTAGTTA GTTATCAGCTAAAAT TERM 2178 1740876 - 1740908 + r 100 -15 -3.45118 | opp_overlap 1740873 1740876 1740882, overlap 1740882 TTTTCGTGACAATCA CCAAAAGCCTGAGG CCTAA CCTCAGGCTTTTAG TTAGTTATCAGCTAA TERM 2179 1740908 - 1740876 - R 100 -17.9 -2.82623 | opp_overlap 1740876 1740882, overlap 1740873 1740882 TTTTCGTGACAATCA CCAAAAGCCTGAGGC CTA ACCTCAGGCTTTTAG TTAGTTATCAGCTAA TERM 2180 1740882 - 1740902 + r 100 -12.6 -4.51197 | opp_overlap 1740882 1740876 1740873, overlap 1740876 TGACAATCACCAAAA GCCTGAGG CCTAA CCTCAGGC TTTTAGTTAGTTATC TERM 2181 1740902 - 1740882 - R 100 -13.3 -4.37527 | opp_overlap 1740876 1740882, overlap 1740876 1740873 TGACAATCACCAAAA GCCTGAGGC CTA ACCTCAGGC TTTTAGTTAGTTATC treA 1742537 - 1740909 - | putative trehalose-6-phosphate hydrolase TERM 2182 1742558 - 1742587 + r 84 -7.9 -4.70583 | opp_overlap 1742556 1742558 1742559, overlap 1742559 1742560 TTCCTCCCTAAAATA GTTTCAGGAACTG ATCT CAGTTCCTGAACG TTTTCTCTTAGTAAA TERM 2183 1742586 - 1742558 - R 84 -11.2 -3.63744 | gap 1, opp_overlap 1742558 1742559 1742560, overlap 1742556 1742559 TTCCTCCCTAAAATA GTTTCAGGAACTG ATCT CAGTTCCTGAA-C GTTTTCTCTTAGTAA TERM 2184 1742559 - 1742586 + r 85 -11.4 -3.41627 | opp_overlap 1742558 1742556 1742559, overlap 1742558 1742560 TCCTCCCTAAAATAG TTTCAGGAACTG ATCT CAGTTCCTGAAC GTTTTCTCTTAGTAA TERM 2185 1742586 - 1742559 - R 82 -11.4 -2.78032 | opp_overlap 1742559 1742558 1742560, overlap 1742558 1742556 TCCTCCCTAAAATAG TTTCAGGAACTG ATCT CAGTTCCTGAAC GTTTTCTCTTAGTAA TERM 2186 1742560 - 1742585 + r 95 -14.9 -2.64253 | opp_overlap 1742558 1742559 1742556, overlap 1742559 1742558 CCTCCCTAAAATAGT TTCAGGAACTG ATCT CAGTTCCTGAA CGTTTTCTCTTAGTA SpyM51743 1744628 - 1742604 - | sugar phosphotransferase system (PTS), IIABC component SpyM51744 1744839 - 1745552 + | GntR family regulatory protein TERM 2187 1745558 - 1745592 + T 100 -8.9 -5.12068 | gap 2, opp_overlap 1745565, overlap 1745561 1745565 ACCAAAATAAAGACA GAAAA--AAGCCTTGCA AAA TGCAAGGCTTGCTTTTC TTTTTCTTGACTCTG TERM 2188 1745561 - 1745587 + T 95 -8 -5.42605 | opp_overlap 1745565, overlap 1745558 1745565 AAAATAAAGACAGAA AAAAGCCTTGCA AAA TGCAAGGCTTGC TTTTCTTTTTCTTGA TERM 2189 1745583 - 1745565 - T 100 -13.2 -5.51046 | opp_overlap 1745561 1745558 1745565 TAAAGACAGAAAAAA GCCTTGCA AAA TGCAAGGC TTGCTTTTCTTTTTC TERM 2190 1745565 - 1745583 + T 100 -13.2 -3.96867 | opp_overlap 1745565, overlap 1745561 1745558 TAAAGACAGAAAAAA GCCTTGCA AAA TGCAAGGC TTGCTTTTCTTTTTC SpyM51745 1746157 - 1745831 - | transcriptional regulator protein TERM 2191 1747104 - 1747090 - H 74 -4.2 -5.03314 | opp_overlap 1747101 GCCACTCTCAAAAAA GCCAGA TGA TATGGC CTAGCTATTTTACAA TERM 2192 1747411 - 1747401 - g 79 -6.8 -4.64763 | GCAGCTAAAAAAGAA CAGC AAC GCTG GCAAGACATGGCCTC TERM 2193 1747832 - 1747820 - g 72 -3.3 -5.06451 | opp_overlap 1747820 1747821, overlap 1747821 CACCATTTCAAAAAA GGCAC GAG GTGCA TTTCTCACTGCCTGT SpyM51747 1747233 - 1747964 + | hypothetical protein TERM 2194 1747949 - 1747976 + T 75 -10 -2.80512 | opp_overlap 1747956, overlap 1747949 1747956 TGAATTTGTCTATAT CAAAAAAGAGGC CTAG GCCTCTTTTTTA GTCTTTATTCACAAT TERM 2195 1747949 - 1747977 + T 84 -9.8 -3.68725 | gap 1, opp_overlap 1747956, overlap 1747949 1747956 TGAATTTGTCTATAT C-AAAAAAGAGGC CTAG GCCTCTTTTTTAG TCTTTATTCACAATT TERM 2196 1747969 - 1747956 - T 100 -8.1 -5.21709 | opp_overlap 1747949 1747949 1747956 GTCTATATCAAAAAA GAGGC CTAG GCCTC TTTTTTAGTCTTTAT TERM 2197 1747956 - 1747969 + T 100 -8.1 -5.34055 | opp_overlap 1747956, overlap 1747949 1747949 GTCTATATCAAAAAA GAGGC CTAG GCCTC TTTTTTAGTCTTTAT nrdG 1748752 - 1748138 - | putative anaerobic ribonucleoside-triphosphate reductase activating protein SpyM51749 1749261 - 1748752 - | acetyltransferase (GNAT) family protein SpyM51750 1750205 - 1749270 - | putative oxidoreductase TERM 2198 1749323 - 1749311 - G 77 -7.7 -4.30987 | opp_overlap 1749307 ACTCTCCATAAGAAA GCTGA GAG TCAGC AATCTGTTGACAAAT TERM 2199 1749857 - 1749870 + g 77 -5.3 -4.90778 | opp_overlap 1749849 TGTTAAATCCTGCCA TCAGA AAAG TCTGA TTTTCTTTGGCTAAG SpyM51751 1750380 - 1750234 - | hypothetical protein TERM 2200 1750517 - 1750487 - R 89 -10.7 -4.06533 | opp_overlap 1750492, overlap 1750492 GAAACCATTAAACAA TAAAAGATTGCTT GCATG AAGCAACCTTTTA AGCATATCATATTTC TERM 2201 1750512 - 1750492 - R 80 -6.2 -5.02606 | opp_overlap 1750492, overlap 1750487 CATTAAACAATAAAA GATTGCTT GCATG AAGCAACC TTTTAAGCATATCAT nrdD 1752760 - 1750562 - | anaerobic ribonucleoside triphosphate reductase TERM 2202 1750848 - 1750862 + g 71 -5 -4.63218 | overlap 1750845 TAGTCCCAAACCGCT TCCAAG GCC TTTGGA TTTTGTTGCAAAACA TERM 2203 1752849 - 1752806 - R 100 -10 -5.68023 | gap 1, opp_overlap 1752806 1752804 1752810 CGACAACTAAAAAAA TCAATATATTGTG-TCAAG TTTTTTG CTCGAACACAATATATTGA TATTAAATTACTTTT SpyM51753 1754416 - 1752857 - | hypothetical protein TERM 2204 1753932 - 1753922 - G 73 -6.8 -4.2586 | opp_overlap 1753921 CGATATTAATATAAA TGGC ATA GCCA GTTGAGTAGGATACA TERM 2205 1754802 - 1754788 - R 88 -5.7 -5.6473 | opp_overlap 1754787 1754788, overlap 1754780 ATAACATTAAAAAAA TAGCC CTCAC GGCTA CTTTTTAACATAGTG SpyM51754 1755134 - 1754829 - | hypothetical protein SpyM51755 1755565 - 1755146 - | Holliday junction resolvase-like protein TERM 2206 1755305 - 1755291 - G 70 -8.6 -3.31144 | overlap 1755295 CGTTCATCTTGATAA TGGACT GGA AGTCCA AAAAGGTGCTCTATG SpyM51756 1755831 - 1755562 - | hypothetical protein TERM 2207 1755929 - 1755941 + r 76 -7.7 -4.07568 | opp_overlap 1755929 AGGTATTTAAAAAAA GCTCT ACA AGAGC TTTTAGAGCGCAGCA TERM 2208 1755941 - 1755929 - R 100 -7.7 -5.47821 | opp_overlap 1755929 AGGTATTTAAAAAAA GCTCT ACA AGAGC TTTTAGAGCGCAGCA TERM 2209 1755954 - 1755967 + r 70 -8.1 -3.29187 | overlap 1755950 AGCTTTTAGAGCGCA GCACG TAAT CGTGC TTCAGTATTTTCAAT spxA 1756342 - 1755944 - | transcriptional regulator Spx TERM 2210 1756285 - 1756297 + g 77 -7.7 -4.1711 | GCTTATGGGCATTTA GCCAA GTT TTGGC TTTCTTGCAGCTCGT TERM 2211 1756406 - 1756421 + r 100 -7.6 -5.79588 | opp_overlap 1756404 1756406, overlap 1756397 TCTTATCTATAAATA TAGGTC TTTG GACCTA TTTTTTTAATTTTAA TERM 2212 1756614 - 1756629 + r 71 -4.6 -4.88228 | opp_overlap 1756593 1756616, overlap 1756616 AAAATACATTTTAAA AAGCCC TGAA GGGCTC TTTTTAATCTTCAAT TERM 2213 1756616 - 1756627 + r 73 -7.2 -4.05583 | opp_overlap 1756616, overlap 1756614 AATACATTTTAAAAA GCCC TGAA GGGC TCTTTTTAATCTTCA TERM 2214 1756627 - 1756616 - R 81 -7.2 -4.6644 | opp_overlap 1756616 1756614 AATACATTTTAAAAA GCCC TGAA GGGC TCTTTTTAATCTTCA recA 1757769 - 1756633 - | recombinase A cinA 1759129 - 1757858 - | competence damage-inducible protein A TERM 2215 1759205 - 1759179 - R 100 -8.9 -5.15634 | opp_overlap 1759179, overlap 1759199 TATTTTATCAAAAAA TCTTCCAATTC ACGAA GAATTAGAAGA TTCTATTGAAAACAC tag 1759758 - 1759198 - | DNA-3-methyladenine glycosylase ruvA 1760364 - 1759768 - | Holliday junction DNA helicase motor protein TERM 2216 1759957 - 1759973 + g 70 -9.5 -2.73243 | overlap 1759956 GGTATGACCAGTCTC TTGTGGA GCC TCCACAA ATTTGCCAGCTAAGT TERM 2217 1760207 - 1760194 - G 71 -6.7 -4.13254 | AAACCCAAACAACAA GTGAG CATC CTCAC GAATCACTTGATGCA lmrP 1761586 - 1760366 - | putative transporter protein TERM 2218 1760842 - 1760830 - G 70 -9.1 -3.20349 | overlap 1760828 CTTGGAAACCTAACA CAGCC GTT GGCTG AAAATACAGTTTCAA TERM 2219 1761397 - 1761379 - G 73 -9.6 -3.21099 | CTTTTTTACGACCAA GAGCATCT GAC AGATGCCC ACCGTATAAAGTTCC mutL 1763579 - 1761597 - | DNA mismatch repair protein TERM 2220 1762204 - 1762217 + g 73 -2.4 -5.28166 | CCAAAATAATCCAAT TCAG GAAATA CTGA TTTTTCTTCATTTTC TERM 2221 1763142 - 1763132 - G 79 -5.4 -5.00616 | opp_overlap 1763121 1763132 GCGTGTTGTAAAAAA GGTT TTC AACC TTAATTTTGGTTCCA TERM 2222 1764282 - 1764272 - R 72 -4 -5.03747 | AAATGTTCTAAAAAA GATT TCA AATC AGACGGATCAATAAA TERM 2223 1764533 - 1764553 + r 76 -4.7 -4.90013 | opp_overlap 1764533 TCCATTAGATAGGAA GTCAAGC TGCGCGT GCTTGGC TTTTTGATTAACTTC TERM 2224 1764646 - 1764668 + r 76 -7.8 -4.02997 | opp_overlap 1764652, overlap 1764652 GATAAATACTAGCAC GATAAACGAT TGT ATCGTTTTTC TTCTTATGTTCTGTT TERM 2225 1764652 - 1764662 + r 86 -5.4 -5.35721 | opp_overlap 1764652, overlap 1764646 TACTAGCACGATAAA CGAT TGT ATCG TTTTTCTTCTTATGT SpyM51765 1766024 - 1765035 - | hypothetical protein TERM 2226 1765208 - 1765228 + g 95 -8.3 -5.46698 | CATTAAATAGTTGCA GGTCGTTTG TTG TAAACGGCC TTTTTTGCTTTTCAC SpyM51766 1766325 - 1766050 - | putative DNA-binding phage protein SpyM51767 1767632 - 1766676 - | putative DNA-binding phage protein TERM 2227 1767584 - 1767600 + g 77 -8.1 -4.14472 | overlap 1767580 GTAGGTTGAGCCTTC TAGAGAA GTA TTCTCTA TTTTCAAGATCTTGA SpyM51768 1767787 - 1768020 + | putative DNA-binding phage protein TERM 2228 1768080 - 1768065 - f 100 -8.2 -5.16132 | CAGACCAAAAGAAAA CGCACC ACAA GGCGCG TGAAAACAACAAAAA SpyM51769 1768314 - 1768646 + | hypothetical protein SpyM51770 1768646 - 1768837 + | putative phage membrane protein SpyM51771 1768849 - 1769178 + | hypothetical protein SpyM51772 1769181 - 1769453 + | putative DNA-binding phage protein SpyM51773 1769454 - 1770320 + | hypothetical protein SpyM51774 1770340 - 1771842 + | putative phage replication protein TERM 2229 1772166 - 1772156 - f 81 -4 -5.49729 | AAGGAGCTAAAAAAA TTGA AAA TCAA ACTATTTTATCAAAA SpyM51774A 1772156 - 1772329 + | hypothetical protein SpyM51774B 1772335 - 1772508 + | hypothetical protein SpyM51775 1772609 - 1773067 + | hypothetical protein TERM 2230 1773094 - 1773069 - f 73 -6.1 -4.42062 | opp_overlap 1773075, overlap 1773075 TACTCGTTAAATAAA CAATCAGAGGG TTTT CCCTCTTTTTG TCGTTTTATCAATAG TERM 2231 1773075 - 1773088 + F 100 -8.1 -5.10601 | opp_overlap 1773069 1773075 TTAAATAAACAATCA GAGGG TTTT CCCTC TTTTTGTCGTTTTAT SpyM51776 1773141 - 1773629 + | hypothetical protein TERM 2232 1773834 - 1773820 - f 76 -5.8 -4.68645 | CATCTAAAACTAAAA TAAAAC ATT GTTTTA GCGCTTCTAGCTACT TERM 2233 1773984 - 1773955 - f 89 -7.9 -4.90918 | overlap 1773961 ACAAAACGAACAAAA CAAAAAGACGTCC ATAT GAACGCCTCCTTG GTTAAATTTAAGCTT TERM 2234 1773978 - 1773961 - f 88 -5.5 -5.62288 | overlap 1773955 CGAACAAAACAAAAA GACGTCC ATAT GAACGCC TCCTTGGTTAAATTT SpyM51777 1774033 - 1774395 + | putative DNA-binding phage protein SpyM51778 1774370 - 1774753 + | putative autolysin regulatory protein SpyM51779 1774955 - 1775617 + | putative secreted phage protein TERM 2235 1775691 - 1775672 - T 84 -7.9 -4.55798 | opp_overlap 1775672 TAGGGCAAACTAAAA GCGTAGT ATTTAA ACTACGC TAGTTCTTGCCTGCT TERM 2236 1775724 - 1775737 + T 93 -6.7 -5.4756 | opp_overlap 1775724 1775723 ACTCATTGTGTAAAG GACCT GTAA AGGTC TTTTTTGTTCACCTT TERM 2237 1775966 - 1775989 + T 81 -5.3 -5.0925 | opp_overlap 1775966 TTGACAGAACAAAAA GATGCCTTC AATATA GAAAGCATC TTTTTCATTTTCAGC TERM 2238 1775989 - 1775966 - T 93 -7.5 -5.24796 | opp_overlap 1775966 TTGACAGAACAAAAA GATGCCTTC AATATA GAAAGCATC TTTTTCATTTTCAGC mutS 1778567 - 1776012 - | DNA mismatch repair protein TERM 2239 1776412 - 1776371 - G 83 -11.9 -3.25823 | gap 1, opp_overlap 1776373, overlap 1776373 GCGTTGCTACATGAA CATTGACTAGACTTGTCAAC TTA GTTGACAAATCT-GTCAATT CATGATAATGCGTTG TERM 2240 1776373 - 1776410 + g 85 -12.3 -3.23395 | gap 1, opp_overlap 1776371 1776373 GTTGCTACATGAACA TTGACTAGACTTGTCAAC TTA GTTGACAAATCT-GTCAA TTCATGATAATGCGT TERM 2241 1776410 - 1776373 - G 95 -14.5 -3.19602 | gap 1, opp_overlap 1776373, overlap 1776371 GTTGCTACATGAACA TTGACTAGACTTGTCAAC TTA GTTGACAAATCT-GTCAA TTCATGATAATGCGT TERM 2242 1778532 - 1778500 - G 80 -2.1 -5.54079 | gap 1, opp_overlap 1778500 1778503 CTAAAAAGCAAAAAA GCATCTGGATAATC TTTTTT GATG-TCCAGATAC TGTTGCATTCCAGGA SpyM51781 1778760 - 1778554 - | hypothetical protein argR 1779340 - 1778903 - | putative arginine repressor argS 1779631 - 1781322 + | arginyl-tRNA synthetase TERM 2243 1781364 - 1781335 - f 75 -10.1 -2.88074 | opp_overlap 1781335, overlap 1781332 1781339 TAAGTAATAACATTA CTAAGGCTGTCAC ATTT ATGACAGTCTTAG TTTTTTATATTATAA TERM 2244 1781335 - 1781364 + F 100 -11.6 -5.5208 | opp_overlap 1781335 1781332 1781339 TAAGTAATAACATTA CTAAGGCTGTCA CATTTA TGACAGTCTTAG TTTTTTATATTATAA SpyM51784 1781410 - 1781718 + | putative bacteriocin immunity protein TERM 2245 1781747 - 1781716 - T 93 -11.9 -4.25283 | opp_overlap 1781722, overlap 1781722 AGTGGGGGACCAAAA TAAAAATACAGGT TGTTTG ACCTGTATTTTTA TTTATCATAATTTCT TERM 2246 1781741 - 1781722 - T 93 -6.5 -5.50723 | opp_overlap 1781722, overlap 1781716 GGACCAAAATAAAAA TACAGGT TGTTTG ACCTGTA TTTTTATTTATCATA TERM 2247 1781722 - 1781741 + T 95 -7.2 -5.40464 | opp_overlap 1781716 1781722 GGACCAAAATAAAAA TACAGGTT GTTT GACCTGTA TTTTTATTTATCATA SpyM51785 1782617 - 1781745 - | hypothetical protein SpyM51786 1783538 - 1782660 - | hypothetical protein SpyM51787 1784499 - 1783558 - | hypothetical protein TERM 2248 1784364 - 1784394 + g 74 -4 -5.09762 | opp_overlap 1784358 1784367, overlap 1784366 1784367 TAGAGAGAATGCCAT AAAGCAGAGAAG CCGAAAT CTTCTCTGCATA TTTTTCTCTTGAAAT TERM 2249 1784366 - 1784392 + g 73 -6.6 -4.17211 | opp_overlap 1784358 1784367, overlap 1784364 1784367 GAGAGAATGCCATAA AGCAGAGAAG CCGAAAT CTTCTCTGCA TATTTTTCTCTTGAA TERM 2250 1784367 - 1784391 + g 75 -10.1 -3.09242 | opp_overlap 1784358 1784367, overlap 1784366 1784364 AGAGAATGCCATAAA GCAGAGAAG CCGAAAT CTTCTCTGC ATATTTTTCTCTTGA TERM 2251 1784391 - 1784367 - G 84 -10.1 -3.94381 | opp_overlap 1784366 1784364 1784367, overlap 1784358 AGAGAATGCCATAAA GCAGAGAAG CCGAAAT CTTCTCTGC ATATTTTTCTCTTGA aspS 1786240 - 1784492 - | aspartyl-tRNA synthetase TERM 2252 1785329 - 1785347 + g 83 -11.8 -3.21593 | overlap 1785327 CTTGAAGTCAATTCC CTTGACAG TTA CTGTCAAG TCTTGTAAAAGCATC TERM 2253 1786517 - 1786480 - R 100 -11.5 -4.83243 | gap 1, opp_overlap 1786480 CTTACAGAAAACAAA CAGGTGCAACTCC-CTTC TAA AAAGAGAAGTTACACCTG TTTTAGTGATTATCT TERM 2254 1786480 - 1786517 + r 76 -6.4 -4.38129 | gap 1, opp_overlap 1786480 CTTACAGAAAACAAA CAGGTGCAACT-CCCTT CTAAA AAGAGAAGTTACACCTG TTTTAGTGATTATCT hisS 1787858 - 1786578 - | histidyl-tRNA synthetase TERM 2255 1788012 - 1787983 - H 85 -3.7 -5.61881 | opp_overlap 1787988, overlap 1787984 TTGTAAAAATAAAAA GTTTTGTCAAGTA ACTT TACTTTACAAAAA AGATATGTTATCATA TERM 2256 1788011 - 1787984 - H 71 -7.2 -3.95502 | opp_overlap 1787988, overlap 1787983 TGTAAAAATAAAAAG TTTTGTCAAGTA ACTT TACTTTACAAAA AAGATATGTTATCAT TERM 2257 1788024 - 1788014 - H 78 -4 -5.26316 | overlap 1788016 TTACTTTACAAAAAA GATA TGT TATC ATAGTGAAGTTGATG rpmF 1788078 - 1788260 + | 50S ribosomal protein L32 rpmG 1788276 - 1788425 + | 50S ribosomal protein L33 TERM 2258 1788575 - 1788607 + F 100 -17.2 -4.36903 | opp_overlap 1788578 TTTGGATATTGAAGT TAAGCCCTGTCATC ATTTG GATGGCAGGGCTTA TTTATATTTGGTACA TERM 2259 1788604 - 1788578 - f 87 -12.3 -3.20164 | opp_overlap 1788575 GGATATTGAAGTTAA GCCCTGTCATC ATTTG GATGGCAGGGC TTATTTATATTTGGT cadD 1788706 - 1789332 + | cadmium resistance protein cadC 1789344 - 1789682 + | putative cadmium efflux system accessory protein SpyM51795 1790714 - 1791472 + | hypothetical protein SpyM51796 1791462 - 1792064 + | hypothetical protein TERM 2260 1792071 - 1792109 + T 88 -5.3 -5.55695 | gap 2 AAGCGTTAATTCCTT GGGGCTG--TGGCTTGCGT TAA GCAAAAGCCAGACAGCCCC TTTTTTATATTCTTA TERM 2261 1792334 - 1792379 + T 72 -8.5 -3.53224 | opp_overlap 1792339 1792344, overlap 1792336 1792337 1792344 AAGTAAAATAATTGA GATGAGAAAAGCCTATGAAAT GAAC GTTTCAAAGGCTTTTTTCGTG TTTAAAAAACAAATG TERM 2262 1792336 - 1792377 + T 82 -11.1 -3.34398 | opp_overlap 1792339 1792344, overlap 1792334 1792337 1792344 GTAAAATAATTGAGA TGAGAAAAGCCTATGAAAT GAAC GTTTCAAAGGCTTTTTTCG TGTTTAAAAAACAAA TERM 2263 1792337 - 1792376 + T 83 -12.4 -2.60496 | opp_overlap 1792339 1792344, overlap 1792336 1792334 1792344 TAAAATAATTGAGAT GAGAAAAGCCTATGAAAT GAAC GTTTCAAAGGCTTTTTTC GTGTTTAAAAAACAA TERM 2264 1792369 - 1792344 - T 73 -6.2 -4.51378 | opp_overlap 1792344 1792337 1792336 1792334, overlap 1792339 ATTGAGATGAGAAAA GCCTATGAAA TGAACG TTTCAAAGGC TTTTTTCGTGTTTAA TERM 2265 1792344 - 1792369 + T 95 -6.9 -5.32699 | opp_overlap 1792339 1792344, overlap 1792337 1792336 1792334 ATTGAGATGAGAAAA GCCTATGAAAT GAAC GTTTCAAAGGC TTTTTTCGTGTTTAA SpyM51798 1793189 - 1793031 - | hypothetical protein TERM 2266 1793073 - 1793089 + g 74 -4.5 -4.88405 | overlap 1793068 1793082 1793083 ATAATTATCGTAAGG TTTACAG TCT TTGTAAA TTTTATTTACAACTT TERM 2267 1793613 - 1793630 + G 73 -7.7 -3.95772 | CACAGAGACAAAGCT GACTGGC TATG GCTAGTC TTTACCTTTGTTATT TERM 2268 1793871 - 1793881 + G 84 -6.8 -4.84761 | overlap 1793867 ATCGGAGGAGTCCTA GCCA TCT TGGC TTTTTCTAAAAGTAT SpyM51799 1793274 - 1794116 + | hypothetical protein TERM 2269 1794151 - 1794140 - T 71 -4.4 -4.82901 | GGTTGTTGACAAAAA GTTG ACGC CAAC AAACTAGTGCTCTAT TERM 2270 1794169 - 1794196 + T 100 -11.4 -5.29846 | ACTAGTGCTCTATCT CCCCTTAGATTT TTCA ATATCTAAGGGG TTTTTCTTTGCAATT SpyM51800 1794804 - 1794163 - | NUDIX hydrolase TERM 2271 1794417 - 1794402 - G 79 -3.2 -5.36965 | opp_overlap 1794402 CAAGATGATAAAAAA CTGGCT CGGT AGCAAG TAATTGTTGTAAAGG SpyM51800A 1795011 - 1795337 + | PadR family regulatory protein SpyM51801 1795324 - 1795911 + | hypothetical protein TERM 2272 1796344 - 1796320 - g 77 -5 -5.00616 | opp_overlap 1796320, overlap 1796323 CTGTTCCTGAAAAAA CTAGCCTCAA TGAAG TTAAGGCAAG TAATGTCCCACATAC SpyM51802 1795908 - 1796987 + | hypothetical protein TERM 2273 1797009 - 1797027 + T 74 -8.2 -3.79906 | opp_overlap 1797009 1797020 CAAGACAATAAAAAA CTTGACAG AAA TTGTCAAG TTATTGTCAAAATAA TERM 2274 1797027 - 1797009 - T 100 -7.5 -5.64304 | opp_overlap 1797009, overlap 1797020 CAAGACAATAAAAAA CTTGACA GAAAT TGTCAAG TTATTGTCAAAATAA TERM 2275 1797052 - 1797081 + T 100 -7.9 -6.10489 | opp_overlap 1797052 AAATAAGACAAAAAA CAGCATCTAGTGT AACT GCCTTAGATGCTG TTTTTTTTTGAGGTT TERM 2276 1797081 - 1797052 - T 88 -5 -5.57729 | opp_overlap 1797052 AAATAAGACAAAAAA CAGCATCTAGTG TAACTG CCTTAGATGCTG TTTTTTTTTGAGGTT SpyM51803 1799377 - 1797104 - | hypothetical protein TERM 2277 1798515 - 1798527 + g 71 -6.3 -4.30043 | ACTGGTAATCCTACC TCCAA AGA TTGGA TTCTTTTAGCTTTAT TERM 2278 1799467 - 1799489 + H 76 -10 -3.01712 | opp_overlap 1799464 1799463 AGAGAAAAAATTTCA CTTTTGGACA TTA TGTCTAAAAG TGTTCAAAAGGAGAG SpyM51804 1799512 - 1800045 + | TetR family regulatory protein TERM 2279 1800185 - 1800155 - T 74 -9.2 -2.94218 | opp_overlap 1800157 1800163, overlap 1800163 ATTTGTTATGAGATA CAAAAAAAGCCTAT TAA ATAGGCTTTTTGTA AGTTTAATCTTAAAA TERM 2280 1800157 - 1800183 + T 72 -9.6 -2.71059 | opp_overlap 1800155 1800163, overlap 1800163 TTGTTATGAGATACA AAAAAAGCCTAT TAA ATAGGCTTTTTG TAAGTTTAATCTTAA TERM 2281 1800177 - 1800163 - T 100 -8.6 -5.76633 | opp_overlap 1800157 1800163, overlap 1800155 TGAGATACAAAAAAA GCCTAT TAA ATAGGC TTTTTGTAAGTTTAA TERM 2282 1800163 - 1800177 + T 100 -8.6 -4.94992 | opp_overlap 1800163 1800155, overlap 1800157 TGAGATACAAAAAAA GCCTAT TAA ATAGGC TTTTTGTAAGTTTAA rpsD 1800812 - 1800201 - | 30S ribosomal protein S4 TERM 2283 1801535 - 1801523 - R 100 -9.1 -5.28942 | TATTGTAAAGAAAAA GCCTC TAT GAGGC AAAAATCAATCTAAA veg 1801813 - 1801541 - | hypothetical protein dnaC 1803197 - 1801830 - | replicative DNA helicase TERM 2284 1802804 - 1802836 + g 91 -13.5 -2.62184 | opp_overlap 1802795 1802806 TTAAAATTTCATCAT AAGCTAGGTTGACAG ATT CTGTCAACCTAGCAA TAATATCACGCAACA TERM 2285 1802834 - 1802806 - G 100 -20.5 -3.43689 | opp_overlap 1802804, overlap 1802795 AAAATTTCATCATAA GCTAGGTTGACAG ATT CTGTCAACCTAGC AATAATATCACGCAA rplI 1803679 - 1803227 - | 50S ribosomal protein L9 SpyM51809 1805652 - 1803676 - | DHH family protein TERM 2286 1803929 - 1803964 + g 85 -4.2 -5.67063 | gap 1, overlap 1803930 1803933 GACAGTATCGTATCT GCAGCTTTACTAGCAAT AAC ATTGCTA-TAAAGATGA TTTTTTTCTCCTGCA TERM 2287 1803930 - 1803963 + g 75 -7.7 -3.99153 | gap 1, overlap 1803929 1803933 ACAGTATCGTATCTG CAGCTTTACTAGCAAT AAC ATTGCTA-TAAAGATG ATTTTTTTCTCCTGC TERM 2288 1805591 - 1805571 - G 77 -10.5 -3.32844 | TTTTTGATTGCATAA TACTGACAC AAA GTGCCAGTA GTCCAAATAAAATCA TERM 2289 1805706 - 1805690 - R 89 -5.8 -5.34555 | TTATACCATAAAAAA GCCCTG AAATA CAGAGC TTCCACTTGCTTTGA gidA 1807640 - 1805742 - | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA TERM 2290 1808185 - 1808174 - R 72 -3.6 -5.04325 | overlap 1808175 GCTAAACCATAAAAA GGGC CAAA ACCC TAGAAGATTGCAGGA trmU 1809979 - 1808858 - | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase TERM 2291 1809323 - 1809352 + g 72 -10.1 -2.65527 | overlap 1809322 1809321 AGTCATCATGCGACC TTTTTGTGCCGGT AAGT ACTGGCTCAAAAA CTGTTTGAAATTCTT TERM 2292 1810016 - 1810044 + H 73 -3.3 -5.21236 | opp_overlap 1810016 1810019, overlap 1810019 TAAGATAGAAAAAGA TAATCATCATATT ATG AATATTATGATTC TTTTTCTTATCAGTT TERM 2293 1810019 - 1810041 + H 71 -5 -4.68512 | opp_overlap 1810016 1810019, overlap 1810016 GATAGAAAAAGATAA TCATCATATT ATG AATATTATGA TTCTTTTTCTTATCA TERM 2294 1810169 - 1810182 + H 77 -2.5 -5.55769 | GGAATGCCAATCATT TTATT GCTC AATAA TTTTTTATTATAAAA sdhB 1810277 - 1810948 + | putative L-serine dehydratase, beta chain TERM 2295 1811479 - 1811501 + G 80 -10.6 -3.38812 | overlap 1811477 GCAGAAGTTGGTTCT GCAGCTGC TATGAGT GCAGCTGC TCTTGTTAAAGCAGC sdhA 1810960 - 1811832 + | putative L-serine dehydratase, alpha chain TERM 2296 1812188 - 1812225 + T 100 -14.5 -4.17556 | opp_overlap 1812193, overlap 1812193 AGACAATTAAATACC AAAAACCTATTGTTAGT AAAT ACTAACAATAGGTTTTA TTTCTTCCAGCTATG TERM 2297 1812220 - 1812193 - T 100 -14.4 -4.946 | opp_overlap 1812188 1812193 ATTAAATACCAAAAA CCTATTGTTAGT AAAT ACTAACAATAGG TTTTATTTCTTCCAG TERM 2298 1812193 - 1812220 + T 100 -14.4 -5.09762 | opp_overlap 1812193, overlap 1812188 ATTAAATACCAAAAA CCTATTGTTAGT AAAT ACTAACAATAGG TTTTATTTCTTCCAG SpyM51815 1812860 - 1812246 - | putative transglycosylase protein TERM 2299 1812640 - 1812653 + g 76 -2.4 -5.41941 | GGAATAGGCTCCGAA GCAA TGCTCT TTGC TTTTTCTTTGCTTTC TERM 2300 1813054 - 1813064 + r 76 -6.8 -4.39318 | opp_overlap 1813039 1813054, overlap 1813035 GTTCTGTATTGAACA GGAC TCA GTCC TTTTAGATTTCGTTC TERM 2301 1813187 - 1813147 - R 100 -9.2 -4.84642 | opp_overlap 1813142 1813166 CTCAAATGAAGAAAA GTACCTCAATCATTAGAT GTTGT ATCTAACTTTTGAGGTAC AATTCATTTCTTATA SpyM51816 1814031 - 1813231 - | putative cobalt transport protein SpyM51817 1814866 - 1814024 - | cobalt transporter ATP-binding subunit SpyM51818 1815681 - 1814842 - | cobalt transporter ATP-binding subunit TERM 2302 1814932 - 1814948 + g 75 -9.5 -3.29263 | opp_overlap 1814934 ACCTTCTTCTTGAAG CATCTGT ACA ACAGATG TTGTAAAAGGGATAT TERM 2303 1815117 - 1815127 + g 79 -3.2 -5.4588 | CAGTCAGCTGGTAGT CGTC ACG GATG TTTTTTATAGTTTTA TERM 2304 1815608 - 1815621 + g 73 -2.3 -5.20606 | ACATGAAACGATACG CCATC TAAT GTTGG TTTTTCTTGGTCTTT pgsA 1816225 - 1815683 - | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase SpyM51820 1817264 - 1816239 - | hypothetical protein SpyM51821 1818603 - 1817314 - | putative protease SpyM51822 1819849 - 1818605 - | hypothetical protein TERM 2305 1819441 - 1819451 + g 78 -2.6 -5.50499 | CTGACTCGATGTAGT TAAT CAA ATTA TTTTTTTCAGTCTCA TERM 2306 1820221 - 1820244 + H 75 -7.4 -4.33165 | TCCAATGTTCAATAG CAGCGACTTC TTTA GGGGTCGTTG TTTTGGTACCTTTAG TERM 2307 1820298 - 1820338 + H 100 -18.4 -3.14211 | TTATGGTTTTCGTTA GTGCCTCTCTCCCATGAC GCATA GGGATGGGAGAGAGGCAC TTACTGGAACGACAT TERM 2308 1821128 - 1821144 + H 70 -2.9 -5.18357 | opp_overlap 1821131, overlap 1821114 1821129 1821131 TGGTGAACTACAAGT ATACCTC TTA GAGGTGC TTTTTTCATACCTTA hasA 1821314 - 1822573 + | hyaluronan synthase hasB 1822609 - 1823817 + | UDP-glucose 6-dehydrogenase TERM 2309 1824929 - 1824888 - g 100 -20.6 -5.01732 | opp_overlap 1824888 AAGCTTTGGAAAAAA GTAAAGTACCAACACATT CAAAGT AATGTGTTGGTACTTTAC TTTTTTCCTTGTTTA TERM 2310 1824888 - 1824929 + G 100 -20.6 -5.4148 | opp_overlap 1824888 AAGCTTTGGAAAAAA GTAAAGTACCAACACATT CAAAGT AATGTGTTGGTACTTTAC TTTTTTCCTTGTTTA hasC1 1823999 - 1824913 + | UTP--glucose-1-phosphate uridylyltransferase 1 SpyM51827 1825221 - 1825634 + | hypothetical protein recF 1825636 - 1826742 + | recombination protein F TERM 2311 1826789 - 1826743 - T 100 -18.4 -3.20382 | opp_overlap 1826757, overlap 1826756 1826757 TCTGATATTCACTAA TAACATCAAAAAAGGGTTCAGT TAA ACTGAGCCTTTTTTTGATGTTA TGTGGCGATTAAGAT TERM 2312 1826776 - 1826756 - T 78 -3.9 -5.31545 | opp_overlap 1826757, overlap 1826743 1826757 AATAACATCAAAAAA GGGTTCAGT TAA ACTGAGCCT TTTTTTGATGTTATG TERM 2313 1826757 - 1826775 + T 100 -9.6 -5.6473 | opp_overlap 1826757 1826756 1826743 ATAACATCAAAAAAG GGTTCAGT TAA ACTGAGCC TTTTTTTGATGTTAT SpyM51829 1827661 - 1826798 - | putative sugar uptake protein TERM 2314 1827841 - 1827819 - R 93 -6.2 -5.80817 | TTTAATATAAAAAAA GAGCTGGCAC AAT ATGTCAGCCC TTAAAGTTACTAAAT guaB 1829345 - 1827864 - | inositol-5-monophosphate dehydrogenase TERM 2315 1829520 - 1829545 + r 77 -10.7 -2.8805 | opp_overlap 1829543 AAAAAATTCATTTGG GTCTTATTTTT AATC AAAAATAAGAC TATATAAAACATAAT trpS 1830675 - 1829653 - | tryptophanyl-tRNA synthetase II TERM 2316 1830738 - 1830712 - H 80 -6.5 -4.84527 | opp_overlap 1830712, overlap 1830714 TTGATATAGCAAAAA GTCCCCACGCT ATTAA AACGTGAGGGC GTTATTACAAGTAAT TERM 2317 1831325 - 1831315 - g 70 -2.6 -5.07652 | opp_overlap 1831315 TCTTGGAAAACAAAA TTTT ATT AAAA TACTTTATGGTTCTT SpyM51832 1831094 - 1831966 + | hypothetical protein SpyM51833 1832045 - 1833664 + | ABC transporter ATP-binding protein TERM 2318 1833683 - 1833710 + F 100 -8.4 -5.1361 | opp_overlap 1833682, overlap 1833685 CTTATGATAAATGAG GTGGCTAAGAAG ATCT CTTCCTAGCCTC TTTTTTAAAATTTGT TERM 2319 1833685 - 1833708 + F 86 -9.6 -4.18259 | opp_overlap 1833682, overlap 1833683 TATGATAAATGAGGT GGCTAAGAAG ATCT CTTCCTAGCC TCTTTTTTAAAATTT TERM 2320 1834885 - 1834905 + G 80 -7.7 -4.37527 | opp_overlap 1834885, overlap 1834890 AAGAAGTGACTCAAA TAAAAGCAG GTT TTGCTTTTA TTTTCCTCATTATAC TERM 2321 1834890 - 1834900 + G 72 -3.2 -5.14626 | opp_overlap 1834885, overlap 1834885 GTGACTCAAATAAAA GCAG GTT TTGC TTTTATTTTCCTCAT SpyM51834 1833747 - 1836323 + | ABC transporter permease TERM 2322 1836424 - 1836372 - T 71 -8.7 -3.12432 | opp_overlap 1836373 1836378, overlap 1836378 AAATGAGTCAATATA CTAAAAGCATCTCAAGAGCTAGA TAAATAT TCTAATACTTGAGATGCTTTTAT CGATTTTACTAATAA TERM 2323 1836373 - 1836423 + T 84 -12.2 -2.78495 | opp_overlap 1836372 1836378, overlap 1836378 AATGAGTCAATATAC TAAAAGCATCTCAAGAGCTAGA TAAATAT TCTAATACTTGAGATGCTTTTA TCGATTTTACTAATA TERM 2324 1836418 - 1836378 - T 82 -7.7 -4.43213 | opp_overlap 1836373 1836378, overlap 1836372 GTCAATATACTAAAA GCATCTCAAGAGCTAGA TAAATAT TCTAATACTTGAGATGC TTTTATCGATTTTAC TERM 2325 1836378 - 1836418 + T 84 -7.7 -4.54477 | opp_overlap 1836378 1836372, overlap 1836373 GTCAATATACTAAAA GCATCTCAAGAGCTAGA TAAATAT TCTAATACTTGAGATGC TTTTATCGATTTTAC TERM 2326 1836807 - 1836789 - T 100 -10.4 -5.99154 | opp_overlap 1836788 1836787 TACTAAATAAAAAAA TCCTAAGA TTA TCTTAGGA AATATCTTATCACTC TERM 2327 1836920 - 1836906 - T 100 -5 -6.20267 | GGAAAAAGAAAAAAA TTGCCA AAA TGACAA TCGCGATAGTCCGTA TERM 2328 1837207 - 1837230 + T 75 -7.4 -4.33165 | TCCAATGTTCAATAG CAGCGACTTC TTTA GGGGTCGTTG TTTTGGTACCTTTAG TERM 2329 1837284 - 1837324 + T 100 -18.4 -3.14211 | TTATGGTTTTCGTTA GTGCCTCTCTCCCATGAC GCATA GGGATGGGAGAGAGGCAC TTACTGGAACGACAT TERM 2330 1838114 - 1838130 + T 70 -2.9 -5.18357 | opp_overlap 1838117, overlap 1838100 1838115 1838117 TGGTGAACTACAAGT ATACCTC TTA GAGGTGC TTTTTTCATACCTTA TERM 2331 1838346 - 1838360 + T 93 -6.4 -5.88197 | opp_overlap 1838339 1838346 ATCAAAGATAAAAAA GCACTG TTT TAGTGC TTTTTTTGTATTTAC TERM 2332 1838360 - 1838346 - T 88 -5.7 -5.5762 | opp_overlap 1838346, overlap 1838339 ATCAAAGATAAAAAA GCACT GTTTT AGTGC TTTTTTTGTATTTAC SpyM51836 1838970 - 1838491 - | SPOUT methyltransferase superfamily protein TERM 2333 1839071 - 1839038 - H 88 -13.5 -2.71011 | opp_overlap 1839042 1839046 1839048, overlap 1839042 1839048 ATTTTTCTTCAACTA CTAATAAAAACCTTT GTAC AAAGGTCTTTATTAG TAAAAAGAAAAGTAA TERM 2334 1839061 - 1839048 - H 81 -5.3 -5.16071 | opp_overlap 1839046 1839042 1839048, overlap 1839042 1839038 AACTACTAATAAAAA CCTTT GTAC AAAGG TCTTTATTAGTAAAA TERM 2335 1839110 - 1839078 - H 100 -19.5 -4.77036 | opp_overlap 1839078, overlap 1839083 CTTTATTAGTAAAAA GAAAAGTAATCCACA GCC TGTGGATTACTTTTC TTTTTTTTATTTTTA TERM 2336 1839078 - 1839110 + H 100 -19.5 -6.4275 | opp_overlap 1839078 1839083 CTTTATTAGTAAAAA GAAAAGTAATCCACA GCC TGTGGATTACTTTTC TTTTTTTTATTTTTA TERM 2337 1839105 - 1839083 - H 100 -13.6 -5.3104 | opp_overlap 1839078, overlap 1839078 TTAGTAAAAAGAAAA GTAATCCACA GCC TGTGGATTAC TTTTCTTTTTTTTAT htrA 1839182 - 1840405 + | serine protease TERM 2338 1840438 - 1840466 + F 100 -17.7 -4.55093 | opp_overlap 1840430 1840440 1840445, overlap 1840445 TATTACATTTTATCA CATAAAACAGTCC AAA GGACTGTTTTATG TTTCTTATTCTATCC TERM 2339 1840464 - 1840440 - f 100 -14.5 -2.80443 | opp_overlap 1840438 1840445, overlap 1840430 1840445 TTACATTTTATCACA TAAAACAGTCC AAA GGACTGTTTTA TGTTTCTTATTCTAT TERM 2340 1840445 - 1840459 + F 100 -10 -4.91194 | opp_overlap 1840440 1840445, overlap 1840438 TTTTATCACATAAAA CAGTCC AAA GGACTG TTTTATGTTTCTTAT TERM 2341 1840459 - 1840445 - f 91 -10 -4.57353 | opp_overlap 1840445 1840438, overlap 1840440 TTTTATCACATAAAA CAGTCC AAA GGACTG TTTTATGTTTCTTAT SpyM51838 1840464 - 1841270 + | putative chromosome partitioning protein