TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.579448 %AT, 1775629 nt, 10720 terms. Intergenic: 0.641202 %AT, H2T: 411873 nt, 2248 terms; T2T: 88489 nt, 1566 terms; H2H: 86381 nt, 767 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|146317663|ref|NC_009442.1| Streptococcus suis 05ZYH33, complete genome (length 2096309) dnaA 1 - 1374 + | chromosomal replication initiation protein TERM 1 2068 - 2057 - g 74 -4.4 -4.93595 | ATAAAAATCTAAAAA CTGT TGCA ACAG ATTCACACCGTATGA SSU05_0002 1528 - 2664 + | DNA polymerase III subunit beta TERM 2 2698 - 2672 - f 79 -11 -2.77256 | opp_overlap 2672 2678, overlap 2669 2666 2678 CCAACTAAATAATAT TAAGAACGGCTA AAC TAGCCGTTTTTA TGTTATACTAAAAAA TERM 3 2672 - 2698 + F 95 -13.2 -3.27475 | opp_overlap 2672 2669 2666 2678, overlap 2678 CCAACTAAATAATAT TAAGAACGGCTA AAC TAGCCGTTTTTA TGTTATACTAAAAAA TERM 4 2678 - 2692 + F 100 -10 -5.16133 | opp_overlap 2678 2672 2669 2666, overlap 2672 AAATAATATTAAGAA CGGCTA AAC TAGCCG TTTTTATGTTATACT TERM 5 2692 - 2678 - f 85 -10 -3.86781 | opp_overlap 2672 2678, overlap 2672 2669 2666 AAATAATATTAAGAA CGGCTA AAC TAGCCG TTTTTATGTTATACT TERM 6 2854 - 2832 - g 71 -3.4 -5.04377 | TCAAAATAAAAGAAA GTTATCCACA GCT TGCAGTTAAC ATTTTTATGACAGTT SSU05_0003 2756 - 3637 + | sphingosine kinase and enzymes related to diacylglycerol kinase SSU05_0004 3647 - 3793 + | hypothetical protein TERM 7 3857 - 3877 + F 83 -6.9 -4.7254 | AAGCCTAGTTGACAG TTTGCAACT ACT GGTTGCGAA TTTTTCCTAAAAAGT SSU05_0005 3947 - 4282 + | transcriptional regulator TERM 8 4317 - 4334 + F 90 -7 -5.07941 | opp_overlap 4317 ATTATTTTTAACGAA GCTTGC CAAACA GCAAGC TTTTTCTCTACTTTT TERM 9 4891 - 4877 - g 71 -5 -4.65895 | opp_overlap 4885, overlap 4883 4885 GCCCGTACGCAAAAA GACAAA GAT TCTGTC GCAGAATTTGCAGTT SSU05_0006 4424 - 5515 + | translation-associated GTPase TERM 10 5629 - 5650 + F 91 -9.5 -4.49756 | overlap 5645 AGAGGATGATTACTT GGTTGGAAA GCTT TTTCCAGCC TTTTGGTATTTAAGG SSU05_0007 5673 - 6242 + | peptidyl-tRNA hydrolase TERM 11 9385 - 9363 - g 70 -7.8 -3.63097 | overlap 9361 AGCGTATAAAGAATA TTGACAGTCG TGT CAACTATCAA GAATTGCAAGAAGAA SSU05_0008 6242 - 9736 + | transcription-repair coupling factor SSU05_0009 9786 - 10058 + | ribosome-associated heat shock protein implicated in the recycling of the 50S subunit SSU05_0010 10045 - 10413 + | septum formation initiator SSU05_0011 10410 - 10523 + | hypothetical protein TERM 12 11720 - 11736 + G 71 -4.3 -4.82548 | overlap 11733 TGTAGCGATTGTTTA CGCAGGG TCT CCCTTTG TTTTATCTATTTTTA SSU05_0012 10536 - 11816 + | Beta-lactamase class A TERM 13 11838 - 11855 + G 73 -2.7 -5.14965 | opp_overlap 11838 GATAGATTTTTAAAA GTGAC ACTGGATG GTCAC TTTTTTGATAAACAT TERM 14 13053 - 13043 - g 78 -4 -5.243 | TAAATCAGTAAAAAA TGAT ATA ATCA AAGCTACCTTATATA SSU05_0013 11817 - 13085 + | ATPase TERM 15 13157 - 13139 - g 73 -6 -4.51812 | TTTCAGAAGAAGAAA TCGTTGCA AAA TGCAAAGA ACTCGGTCAAATTCT SSU05_0014 13093 - 13635 + | hypoxanthine-guanine phosphoribosyltransferase TERM 16 13678 - 13694 + G 73 -5.2 -4.6265 | opp_overlap 13678 AATCAACCAAATAAA GGATTT ATAAA AAATCC TTTTCTCATTATTCT TERM 17 13694 - 13678 - g 73 -5.2 -4.59212 | opp_overlap 13678 AATCAACCAAATAAA GGATTT ATAAA AAATCC TTTTCTCATTATTCT TERM 18 14416 - 14426 + G 73 -5.4 -4.6759 | CCATTCTTCTCCATT TCTG GTT CAGA TTTTGTTGAAATGTT TERM 19 14504 - 14494 - g 78 -2.4 -5.52909 | GAAGATGCAAAAAAA GCAG CAC CAGC CATTATTTTCATCGA SSU05_0015 13657 - 15630 + | ATP-dependent Zn protease TERM 20 15689 - 15720 + F 100 -10.2 -5.1101 | opp_overlap 15689 TAAAATAACCACAAA GCCTTCGCTAAG TACATAAT CTTGGCGAGGGC TTTTTTACATGATAC SSU05_0016 15968 - 16438 + | Signal transduction histidine kinase TERM 21 17986 - 17999 + F 73 -6.7 -4.1891 | ACATCCCGATGACCG CCCTA GAGA TAGGG TTTCTCTTCGGAGCA TERM 22 19192 - 19213 + F 74 -10.1 -2.58544 | opp_overlap 19193, overlap 19191 ACGGCAGGAGGGCAA ACCGAGGAG TTTA CTCCTCGGG GTTGTAGGACTGCAA TERM 23 19212 - 19193 - f 100 -13.6 -3.62096 | opp_overlap 19192 19191 CGGCAGGAGGGCAAA CCGAGGAG TTTA CTCCTCGG GGTTGTAGGACTGCA TERM 24 19269 - 19254 - f 74 -7.6 -3.92604 | AAGAGTATAGAAGAA CTACCT GGGA AGGTAG GCCAAAGAGAGTAAT TERM 25 19292 - 19302 + F 74 -2.6 -5.28176 | AGAGTAATAGCCTCG TATT TAA AATA TTTTTTATACCTAGC TERM 26 21994 - 22006 + F 78 -10.5 -3.09327 | ACGCCTGAAGTAGTT GGGGG TTG CCCCC TGTTAGATACGGTAG TERM 27 22329 - 22351 + F 72 -8.4 -3.55444 | GCGGAATTGGCAGAC GCACCAGATT TAG GATCTGGCGC TTTCGGGCGTGGGGG TERM 28 22529 - 22509 - f 78 -9.7 -3.31263 | overlap 22511 AGTTCAGTGGTAGAA CACCACCTT GCC AAGGTGGGG GTCGCGGGTTCGAAT TERM 29 22527 - 22511 - f 80 -10.9 -3.22475 | overlap 22509 TTCAGTGGTAGAACA CCACCTT GCC AAGGTGG GGGTCGCGGGTTCGA TERM 30 23518 - 23541 + F 95 -8.2 -4.90002 | opp_overlap 23518 ATTCTCCGTAGTGAA CGAGATTATC GCTT GATATTCTCG TTTTATTGTATCTTG SSU05_0019 23570 - 24406 + | putative cell shape-determining protein MreC TERM 31 24923 - 24943 + F 91 -6.2 -5.52986 | opp_overlap 24923, overlap 24925 ATAGAAATGTAATAA TTGCGTAA TATAC TTACGCGA TTTTTTTGATAAAAT SSU05_0020 24957 - 26252 + | hypothetical protein TERM 32 26265 - 26288 + F 86 -5.3 -5.27335 | opp_overlap 26265 TAAGAAATTTTCAAA TAGAGCGTG TGGATT TGCGCTCTA TTTTTGTTTGAAAAA SSU05_0021 26513 - 27319 + | phosphoribosylpyrophosphate synthetase TERM 33 27326 - 27345 + F 100 -10.8 -5.25805 | opp_overlap 27329 GTTAAATAGGTATGA GAAGAGTC AAAT GACTCTTC TTTTTTACATTTATT TERM 34 27569 - 27556 - g 76 -8.1 -4.22883 | opp_overlap 27556 27554 GATCATGTAAAAGAA GCAGC TAAG GCTGC TATTGATGCTGATCA SSU05_0022 27406 - 28584 + | aromatic amino acid aminotransferase SSU05_0023 28571 - 29353 + | DNA repair protein RecO SSU05_0024 29350 - 30357 + | putative glycerol-3-phosphate acyltransferase PlsX SSU05_0025 30350 - 30598 + | Acyl carrier protein TERM 35 30608 - 30590 - f 81 -3 -5.73672 | opp_overlap 30590, overlap 30582 AAAGAAGTAAAAAAA CGTTCGTA GTT TACGGGCG TTTTTCTTTGTTTTT TERM 36 30590 - 30608 + F 100 -7.4 -5.63012 | opp_overlap 30590 30582 AAAGAAGTAAAAAAA CGTTCGTA GTT TACGGGCG TTTTTCTTTGTTTTT SSU05_0026 30716 - 31423 + | phosphoribosylaminoimidazole-succinocarboxamide synthase SSU05_0027 31427 - 35155 + | phosphoribosylformylglycinamidine synthase domain-containing protein SSU05_0028 35158 - 36612 + | amidophosphoribosyltransferase TERM 37 36707 - 36682 - g 91 -6.7 -5.4182 | overlap 36683 AATGACAAATAAAAA TGCCTACGCCC AATC GGGCGTTGACG TCGAAGCGGGATATG TERM 38 36706 - 36683 - g 86 -10.2 -3.82652 | overlap 36682 ATGACAAATAAAAAT GCCTACGCCC AATC GGGCGTTGAC GTCGAAGCGGGATAT SSU05_0029 36653 - 37690 + | phosphoribosylaminoimidazole synthetase SSU05_0030 37687 - 37971 + | folate-dependent phosphoribosylglycinamide formyltransferase PurN SSU05_0031 37940 - 38239 + | phosphoribosyl glycinamide transformylase-N TERM 39 38916 - 38899 - g 71 -7 -4.11216 | opp_overlap 38899 GCGTTACGGTGAAAA TCCGCA GCAAAA TGCGGA TTTCTACCAAAATGC purH 38249 - 39796 + | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase TERM 40 39811 - 39827 + F 100 -8 -5.4505 | AGAGTTTTGGATTTA GCTCAC TTCGT GTGAGC TTTTTTATTCCCGAA SSU05_0033 39922 - 41184 + | phosphoribosylamine--glycine ligase TERM 41 41329 - 41315 - g 75 -5.6 -4.72007 | GCCTATGAAAAGAAA GTGGTC TCT GCCCAC CGCACCCCAGACCTC SSU05_0034 41210 - 41698 + | phosphoribosylcarboxyaminoimidazole (NCAIR) mutase SSU05_0035 41685 - 42719 + | phosphoribosylaminoimidazole carboxylase ATPase subunit TERM 42 43551 - 43532 - g 89 -3.6 -5.66229 | gap 1, overlap 43534 43535 ATTAATAATAAAAAA CA-CCAAGG ATA CCTTGACTG ACAGCTCTATTAAAA TERM 43 43548 - 43534 - g 74 -6.4 -4.45127 | overlap 43532 43535 TAATAATAAAAAACA CCAAGG ATA CCTTGA CTGACAGCTCTATTA SSU05_0036 42810 - 43571 + | hypothetical protein SSU05_0037 43644 - 44081 + | hypothetical protein TERM 44 44110 - 44094 - f 75 -9.5 -3.2115 | opp_overlap 44097, overlap 44097 TAAATCAGTTATGAA GAATCAG TTT CTGATTC TCAAGTAATTTTAAT SSU05_0038 44145 - 44870 + | hypothetical protein SSU05_0039 44872 - 46164 + | adenylosuccinate lyase TERM 45 46202 - 46170 - f 84 -3.5 -5.67063 | opp_overlap 46176, overlap 46171 46176 TGGATTATAAAAAAA TCAAAATTCTTTGGA TTT TCCAGAGAATTTTTT TGTTTACTTGCGAAT TERM 46 46201 - 46171 - f 71 -7 -3.99153 | opp_overlap 46176, overlap 46170 46176 GGATTATAAAAAAAT CAAAATTCTTTGGA TTT TCCAGAGAATTTTT TTGTTTACTTGCGAA TERM 47 46176 - 46196 + F 100 -9.1 -6.01187 | opp_overlap 46171 46170 46176 ATAAAAAAATCAAAA TTCTTTGGA TTT TCCAGAGAA TTTTTTTGTTTACTT TERM 48 46196 - 46176 - f 85 -6.9 -4.96276 | opp_overlap 46176, overlap 46171 46170 ATAAAAAAATCAAAA TTCTTTGGA TTT TCCAGAGAA TTTTTTTGTTTACTT TERM 49 46603 - 46581 - g 100 -9.4 -5.45726 | opp_overlap 46585 CACACTTGAAAAAAA TAAATCATTT TCA AAATGATTTA CGAATAAACAAGTGT SSU05_0040 46571 - 46735 + | hypothetical protein TERM 50 47048 - 47019 - f 76 -6.6 -4.40963 | overlap 47020 ACTTTGTAAAAAGAA CTTGATAGCTAA TTTGAT TTAGCTATCAAT AAGATGGGAATTTGT TERM 51 47047 - 47020 - f 77 -10.1 -3.23855 | overlap 47019 CTTTGTAAAAAGAAC TTGATAGCTAA TTTGAT TTAGCTATCAA TAAGATGGGAATTTG SSU05_0041 47080 - 47829 + | amino acid transporter SSU05_0043 48039 - 48134 + | hypothetical protein SSU05_0042 47839 - 48417 + | metal-dependent membrane protease SSU05_0044 48378 - 48860 + | hypothetical protein SSU05_0045 48853 - 49725 + | ABC-type multidrug transport system, ATPase component SSU05_0046 49725 - 50498 + | ABC-type sugar transport system, permease component TERM 52 50580 - 50611 + G 70 -5.8 -4.26871 | overlap 50581 50608 TAGTTCTGAGTGCAC TTGGGGTTGGAATG GGTT TGTTCCTGCCCCAG TTTATTGGTAAATTG SSU05_0047 50501 - 50983 + | ABC-type multidrug transport system, ATPase and permease component SSU05_0048 50991 - 52214 + | ABC-type multidrug transport system, ATPase and permease component SSU05_0049 52316 - 52489 + | hypothetical protein TERM 53 52729 - 52763 + F 100 -13.8 -4.52047 | opp_overlap 52735, overlap 52735 GATTATATAATCTCC TGAGAATACTGGACTC ACT GAGTCTGGTATTTTCA TTTTATGCTATAATG TERM 54 52735 - 52757 + F 100 -9.2 -4.74012 | opp_overlap 52735, overlap 52729 ATAATCTCCTGAGAA TACTGGACTC ACT GAGTCTGGTA TTTTCATTTTATGCT ruvB 52784 - 53785 + | Holliday junction DNA helicase B SSU05_0051 53785 - 54531 + | hypothetical protein SSU05_0052 54533 - 55168 + | phosphatase TERM 55 55188 - 55200 + F 76 -7.7 -4.03234 | GGGTGGCTTGTACAC CAGCT ATA AGCTG TTTCTCTCCAGCGAC TERM 56 55272 - 55287 + F 95 -7.5 -5.31091 | opp_overlap 55271 55272 GATTACTTGACTAAT GCCCG TAACAT CGGGC TTTTGTTTTGTTATG SSU05_0053 55400 - 56314 + | transcriptional regulator TERM 57 56508 - 56469 - f 75 -5.6 -4.8083 | gap 1 TAATATTATTAAAAA GGGAGCGGG-AAAGACATC CAT GATGGCTCCGCCCTCACCC ACAGAATAATGAAAA TERM 58 56575 - 56524 - f 71 -5.2 -4.60317 | opp_overlap 56530 56534, overlap 56528 56534 ACAGAATAATGAAAA CGAACATAAAGCCCTCACTAGG TGTATAAT CTTAGTGAGGGCTTTGTGGTTA ACGAGTTAATGATGT TERM 59 56571 - 56528 - f 95 -12.6 -3.78229 | opp_overlap 56530 56534, overlap 56524 56534 AATAATGAAAACGAA CATAAAGCCCTCACTAGG TGTATAAT CTTAGTGAGGGCTTTGTG GTTAACGAGTTAATG TERM 60 56530 - 56569 + F 93 -13.8 -2.72379 | opp_overlap 56528 56524 56534, overlap 56534 TAATGAAAACGAACA TAAAGCCCTCACTAGG TGTATAAT CTTAGTGAGGGCTTTG TGGTTAACGAGTTAA TERM 61 56565 - 56534 - f 86 -10.2 -4.3341 | opp_overlap 56534 56530, overlap 56528 56524 GAAAACGAACATAAA GCCCTCACTAGG TGTATAAT CTTAGTGAGGGC TTTGTGGTTAACGAG TERM 62 56534 - 56565 + F 93 -12.4 -4.05446 | opp_overlap 56528 56524 56534, overlap 56530 GAAAACGAACATAAA GCCCTCACTAGG TGTATAAT CTTAGTGAGGGC TTTGTGGTTAACGAG TERM 63 57782 - 57772 - g 75 -5.4 -4.82901 | CGTGGCTCACAAAAA GCAA CCA TTGC ACTTGCGCATCAACT SSU05_0054 56719 - 57882 + | transposase TERM 64 57887 - 57863 - T 91 -6.5 -5.31275 | opp_overlap 57863 TTTTAGCACAAAAAA GACTACTAG GGACGAG CTAGTAGCC TAATATAAAAATTGT TERM 65 58049 - 58070 + T 73 -9.5 -2.90714 | opp_overlap 58047, overlap 58052 AGACATCAATTTATG TGAGCTGAC TGCC GTCAGCTTA TATCTCCCACTTTAA TERM 66 58052 - 58067 + T 75 -9 -3.5947 | opp_overlap 58047, overlap 58049 CATCAATTTATGTGA GCTGAC TGCC GTCAGC TTATATCTCCCACTT TERM 67 58088 - 58100 + T 76 -7.7 -4.13767 | opp_overlap 58088 TCTCCCACTTTAAAA GGTCT CCC AGACC TTTTAAACTCCCACC TERM 68 58100 - 58088 - T 76 -7.7 -4.13767 | opp_overlap 58088 TCTCCCACTTTAAAA GGTCT CCC AGACC TTTTAAACTCCCACC TERM 69 58181 - 58167 - T 74 -10 -2.6914 | overlap 58166 GAGGTTGGAGATAAG GCGAAC TCT GTTCGC ATCAGTCGTAATGGT TERM 70 58319 - 58373 + T 78 -9.5 -3.53012 | opp_overlap 58309 58327, overlap 58327 AAGCATTTAAACAAT TAAAGAAACTATTCCCGTCTGAGCA GTTGA TGACAAGACGGGAATAGTTTTTGTA TTTAGGGCACACAAA TERM 71 58365 - 58327 - T 95 -11.1 -4.63748 | opp_overlap 58327 58319 AAACAATTAAAGAAA CTATTCCCGTCTGAGCA GTTGA TGACAAGACGGGAATAG TTTTTGTATTTAGGG TERM 72 58327 - 58365 + T 100 -8.9 -5.19879 | opp_overlap 58327, overlap 58319 AAACAATTAAAGAAA CTATTCCCGTCTGAGCA GTTGA TGACAAGACGGGAATAG TTTTTGTATTTAGGG SSU05_0055 59358 - 58420 - | transposase TERM 73 58759 - 58791 + g 100 -10 -4.82678 | opp_overlap 58758 TAGGTCACGAAAACT GGTCTCTATGCC CCATCTGTA GGCATAGAGATC TTTTAATTTTTCTGG TERM 74 59426 - 59398 - H 100 -13.3 -5.39721 | opp_overlap 59398 59402 GTACTATAGAAAAAA CTAACCTACCACA AAA CGTGATAGGTTAG TTAACTTAATGACAT TERM 75 59398 - 59426 + H 79 -10.4 -3.20901 | opp_overlap 59398, overlap 59402 GTACTATAGAAAAAA CTAACCTACCAC AAAAC GTGATAGGTTAG TTAACTTAATGACAT TERM 76 59437 - 59461 + H 76 -2 -5.58179 | opp_overlap 59441, overlap 59440 59441 GTTAGTTAACTTAAT GACATTGGGC TTTTT GCCCAGCCTC TTTTTTGTTATACTA SSU05_0056 59492 - 60718 + | folylpolyglutamate synthase SSU05_0057 60743 - 60856 + | hypothetical protein TERM 77 60837 - 60868 + F 78 -5.9 -4.82667 | opp_overlap 60840, overlap 60840 TTGCAAAAATTTCCA GAACTCCCGAT AGGAAATGAC ATCGGGAGTGC TTTTTGATATAATAA SSU05_0058 60909 - 62432 + | Heme/copper-type cytochrome/quinol oxidase, subunit 1 TERM 78 62430 - 62447 + F 91 -6.3 -5.64421 | opp_overlap 62423 62430, overlap 62423 TATCAAAAGAATGAA TGATTGC TCAG GCAGTCA TTTTTTCTTTAGCCT TERM 79 63711 - 63699 - g 70 -7.7 -3.62096 | GCTGAGGATGTCAAA CCTCT CGA AGAGG ATAGGCAAGAGATTG TERM 80 63813 - 63795 - g 71 -8.2 -3.50853 | TCGGTGGAATCAGAA GATCAGGA GCA TCCTAATC TAAGTGCAAAAGAAT mutL 62547 - 64487 + | DNA mismatch repair protein TERM 81 65003 - 64989 - g 72 -10 -2.76696 | overlap 64988 TCGCCCTTGAAGAAG CCATGG AAG CCATGG AAGCCCTTGGTTACC ruvA 64526 - 65116 + | Holliday junction DNA helicase motor protein TERM 82 65549 - 65577 + F 76 -10.5 -2.68434 | opp_overlap 65546 GTACCTTACTAACTC GCCACAAAAAT AATGTCG ATTTTTGTGGC TCATGTCGTGTCCAG SSU05_0061 65757 - 66410 + | 3-methyladenine DNA glycosylase TERM 83 66980 - 66992 + G 81 -5.5 -5.09426 | GCAGCAACTTTATTC GCGTG TCC TACGC TTTTTTGGAATTGGC SSU05_0062 66411 - 67628 + | nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA SSU05_0063 67749 - 67841 + | recombination protein A TERM 84 68663 - 68645 - g 91 -10.4 -4.09739 | CCAAGGTTCTGAAAA TGCTAAGA AAT TCTTAGCA GATAATCCAGCAATC SSU05_0064 67866 - 68831 + | RecA/RadA recombinase TERM 85 68918 - 68934 + F 100 -8.7 -5.31275 | opp_overlap 68918 68912 68920 TATAAGAACGAAAAA GTCTGGA GAT TCCAGGC TTTTTTCTAATAAAA TERM 86 68934 - 68918 - f 82 -6.5 -5.01845 | opp_overlap 68918, overlap 68912 68920 TATAAGAACGAAAAA GTCTGGA GAT TCCAGGC TTTTTTCTAATAAAA TERM 87 69005 - 68990 - f 70 -3.2 -5.00884 | overlap 68992 AGTTTTTTTAAAAAA TAGGTC TGCA GACCGA GGGAATTTATGATAT spxA 69067 - 69465 + | transcriptional regulator Spx SSU05_0066 69565 - 69831 + | hypothetical protein SSU05_0067 69831 - 70250 + | Holliday junction resolvase-like protein SSU05_0068 70262 - 70582 + | hypothetical protein TERM 88 70605 - 70580 - f 95 -13.5 -3.38072 | opp_overlap 70586, overlap 70586 TTTATGGAAGAGGAA TAAAAAGGTCC GGGT GGACCTTTTTA TCATGAGCATGAAAA TERM 89 70599 - 70586 - f 100 -8.1 -5.19251 | opp_overlap 70586, overlap 70580 GAAGAGGAATAAAAA GGTCC GGGT GGACC TTTTTATCATGAGCA TERM 90 70586 - 70599 + F 95 -8.1 -4.91109 | opp_overlap 70586 70580 GAAGAGGAATAAAAA GGTCC GGGT GGACC TTTTTATCATGAGCA TERM 91 70649 - 70637 - f 73 -9.1 -3.44891 | opp_overlap 70637 AAGAAAGCGAATTAA GGTCC AGT GGACC TTTTTATCATGAGCT TERM 92 70637 - 70649 + F 100 -9.1 -4.91511 | opp_overlap 70637 AAGAAAGCGAATTAA GGTCC AGT GGACC TTTTTATCATGAGCT SSU05_0069 70754 - 71368 + | hypothetical protein TERM 93 71817 - 71838 + G 75 -2.3 -5.30575 | ATAAGTAATGAAGAA TCCTGAAAT AAAA GTTTTGGGA TTTTTTGAATTTTTG TERM 94 71879 - 71862 - g 73 -5.5 -4.7254 | overlap 71864 ATTTTTGAGTAAAAA CTCTTGC AATG GCAAGTG GAATCTGGTAGAATG SSU05_0070 71809 - 72339 + | ribosomal protein S10 TERM 95 73003 - 72981 - g 70 -5.7 -4.30995 | gap 1, overlap 72978 72997 TGTTCCAGAAAAGAA CGTTATCCTT ATCA AAGG-TAACG TACCAGGTGCTAAGA rplC 72436 - 73062 + | 50S ribosomal protein L3 TERM 96 73490 - 73453 - g 100 -9.3 -4.64861 | overlap 73481 GTTGCTGAAAACAAA TTTGTAGCTGTTAACTC ACTT GAATTCACAGCTCCAAA AACTGCTGAATTTGC rplD 73087 - 73710 + | 50S ribosomal protein L4 TERM 97 73750 - 73737 - g 75 -3.1 -5.15634 | overlap 73738 GATGTTATCAAAAAA CCTGT CATC ACAGA AAGCTCAATGGGCCA rplW 73710 - 74009 + | 50S ribosomal protein L23 rplB 74027 - 74860 + | 50S ribosomal protein L2 rpsS 75111 - 75392 + | 30S ribosomal protein S19 TERM 98 75637 - 75620 - g 74 -6.3 -4.56597 | TTTGGTTTGGAAAAA GCTAACT TGGT AGTCAGC GAAGCATTCGCAAAC rplV 75410 - 75754 + | 50S ribosomal protein L22 rpsC 75766 - 76419 + | 30S ribosomal protein S3 rplP 76423 - 76836 + | 50S ribosomal protein L16 SSU05_0079 76846 - 77052 + | 50S ribosomal protein L29 rpsQ 77076 - 77336 + | 30S ribosomal protein S17 rplN 77361 - 77729 + | 50S ribosomal protein L14 TERM 99 77833 - 77804 - f 71 -7.1 -3.84364 | TAGAAAACAAACTAA GTCCCCTGGTTAA ATCA CTAACCAGGGTGC CCATTAGGGCGTAAG rplX 77868 - 78173 + | 50S ribosomal protein L24 TERM 100 78169 - 78153 - f 76 -2.2 -5.55769 | opp_overlap 78153 CGCTACAACAAAAAA TCAGGC GAAGT GCTTGA TTAATCACGAAGGAA TERM 101 78366 - 78346 - g 71 -4.7 -4.66833 | overlap 78347 TTCTAACGCTAAAAA CCTTGAGAA AGC TGCTCAAGA ATTGGCTTTGATCTC rplE 78197 - 78739 + | 50S ribosomal protein L5 TERM 102 78845 - 78832 - f 78 -6.7 -4.57837 | opp_overlap 78831 ACACGCTGTGAAAAA TGTGG ACGT CCACA CTCAGTTTACCGCAA TERM 103 79393 - 79378 - g 76 -2.6 -5.32699 | gap 1, overlap 79379 TCAAACATCAAAAAA GGTATTG CTA CAAT-CC TTAAAAACGAAGGTT rpsH 79276 - 79674 + | 30S ribosomal protein S8 TERM 104 80354 - 80372 + G 71 -8.2 -3.52678 | overlap 80352 80355 CTAGCCGTGCTAACC TCAACAAC ATG GTTGTTGG TGTTTCTGAAGGCTT rplF 80140 - 80676 + | 50S ribosomal protein L6 rplR 80756 - 81121 + | 50S ribosomal protein L18 TERM 105 81379 - 81349 - g 74 -9.8 -3.09061 | overlap 81348 81356 TGCTAAGAAAAACAT GATTGAAGTACCAA TGG TTGGTACAACAATC CCTCACGAAGTTCGC TERM 106 81372 - 81356 - g 72 -9.5 -3.16564 | overlap 81349 81348 AAAAACATGATTGAA GTACCAA TGG TTGGTAC AACAATCCCTCACGA rpsE 81140 - 81634 + | 30S ribosomal protein S5 rpmD 81649 - 81831 + | 50S ribosomal protein L30 TERM 107 81849 - 81872 + F 76 -9.6 -3.46848 | opp_overlap 81849 81843 81841, overlap 81841 TAACAAATAGACTAA GTCGCATAGA GAAA TCTTTGCGAC TTCTAGTCCATTTTA TERM 108 81872 - 81849 - f 76 -9.6 -3.46051 | opp_overlap 81841 81849, overlap 81843 81841 TAACAAATAGACTAA GTCGCATAGA GAAA TCTTTGCGAC TTCTAGTCCATTTTA SSU05_0089 81910 - 82407 + | ribosomal protein L15 SSU05_0090 82421 - 83731 + | preprotein translocase subunit SecY TERM 109 83734 - 83759 + F 78 -4.1 -5.2853 | gap 1, opp_overlap 83734 83736 83738, overlap 83729 83735 83738 AATTACAGAATAGAA TATA-GGTTGAC CTA GTCAACCTTCTA TTTTGTTTTTAGATA TERM 110 83756 - 83736 - f 72 -8.3 -3.47975 | opp_overlap 83735 83734 83729 83738, overlap 83734 83738 TTACAGAATAGAATA TAGGTTGAC CTA GTCAACCTT CTATTTTGTTTTTAG TERM 111 83754 - 83738 - f 82 -10.9 -3.30171 | opp_overlap 83735 83734 83729 83738, overlap 83736 83734 ACAGAATAGAATATA GGTTGAC CTA GTCAACC TTCTATTTTGTTTTT TERM 112 83738 - 83754 + F 90 -10.9 -4.1922 | opp_overlap 83738 83736 83734, overlap 83735 83734 83729 ACAGAATAGAATATA GGTTGAC CTA GTCAACC TTCTATTTTGTTTTT TERM 113 84050 - 84082 + G 70 -9.3 -2.83012 | opp_overlap 84054 84058, overlap 84058 CGTTTGGTTCAGGAT GACATCAAGGAAAAA GGC TTTTTGCTTGATGGC TATCCTCGTACGATT adk 83825 - 84466 + | adenylate kinase infA 84588 - 84806 + | translation initiation factor IF-1 rpsM 84967 - 85332 + | 30S ribosomal protein S13 SSU05_0094 85472 - 85732 + | 30S ribosomal protein S11 SSU05_0095 85777 - 86715 + | DNA-directed RNA polymerase subunit alpha SSU05_0096 86730 - 86885 + | ribosomal protein L17 SSU05_0097 86896 - 87117 + | ribosomal protein L17 TERM 114 87230 - 87278 + T 100 -20.7 -5.50723 | opp_overlap 87245 ATCATGTTGATTGGA CGCTTGTTTACGAAATTACTCTA AGA TAGAATAATTTCGTAAGCAGGCG TTTTTATTTTACTCA TERM 115 87631 - 87610 - T 71 -8.7 -3.25317 | overlap 87608 87606 TGATAAACTAAGATA GTTGTCGCG AGAG CGCGATAAC GACAAGACCTTTGAA TERM 116 88775 - 88788 + T 73 -6.7 -4.1891 | ACATCCCGATGACCG CCCTA GAGA TAGGG TTTCTCTTCGGAGCA TERM 117 89981 - 90002 + T 74 -10.1 -2.58544 | opp_overlap 89982, overlap 89980 ACGGCAGGAGGGCAA ACCGAGGAG TTTA CTCCTCGGG GTTGTAGGACTGCAA TERM 118 90001 - 89982 - T 100 -13.6 -3.62096 | opp_overlap 89981 89980 CGGCAGGAGGGCAAA CCGAGGAG TTTA CTCCTCGG GGTTGTAGGACTGCA TERM 119 90058 - 90043 - T 74 -7.6 -3.92604 | AAGAGTATAGAAGAA CTACCT GGGA AGGTAG GCCAAAGAGAGTAAT TERM 120 90081 - 90091 + T 74 -2.6 -5.28176 | AGAGTAATAGCCTCG TATT TAA AATA TTTTTTATACCTAGC TERM 121 92783 - 92795 + T 78 -10.5 -3.09327 | ACGCCTGAAGTAGTT GGGGG TTG CCCCC TGTTAGATACGGTAG TERM 122 93867 - 93898 + T 100 -11.8 -4.95843 | opp_overlap 93872, overlap 93872 GCCGCCGGTATAGTT TAAAAGACAAGGTT TCTA AGCCTTGTCTTTTG TTTTATCTTTTCTAT TERM 123 93872 - 93893 + T 100 -9.5 -5.2894 | opp_overlap 93872, overlap 93867 CGGTATAGTTTAAAA GACAAGGTT TCTA AGCCTTGTC TTTTGTTTTATCTTT TERM 124 93893 - 93872 - T 73 -7.3 -4.16943 | opp_overlap 93867 93872 CGGTATAGTTTAAAA GACAAGGTT TCTA AGCCTTGTC TTTTGTTTTATCTTT SSU05_0100 95090 - 93948 - | hypothetical protein SSU05_0101 95277 - 95071 - | hypothetical protein TERM 125 95326 - 95347 + r 100 -10.9 -5.61596 | TAGTTAATTTTTAGA GGCGACTTG TTTT CAAGTCGTC TTTTTTTGTCCCCAT SSU05_0102 96354 - 95338 - | hypothetical protein SSU05_0103 96778 - 96359 - | hypothetical protein TERM 126 96965 - 96988 + r 71 -4.6 -4.86001 | gap 1, overlap 96968 TTTCATGTATGTGTG CACCCCCTATT AGT AAT-GGGGGTA TTTTTCTGACCTCCT TERM 127 96968 - 96986 + r 85 -9.6 -4.05067 | overlap 96965 CATGTATGTGTGCAC CCCCTATT AGT AATGGGGG TATTTTTCTGACCTC SSU05_0104 98310 - 97114 - | hypothetical protein TERM 128 97551 - 97535 - G 85 -2.3 -5.80003 | TCAATAAACAAAAAA TTAGG GGTCATT CCTAA ATCATAGGCATCAGC SSU05_0105 98325 - 98423 + | hypothetical protein TERM 129 98709 - 98689 - T 86 -9.7 -4.26881 | opp_overlap 98689, overlap 98684 TTTCATAAAACCAAA GGGGGAG GGGTTAG CTCCCCC TTATATCACTAAGCC TERM 130 98689 - 98709 + T 80 -9.7 -3.51924 | opp_overlap 98689 98684 TTTCATAAAACCAAA GGGGGAG GGGTTAG CTCCCCC TTATATCACTAAGCC SSU05_0106 99038 - 98718 - | hypothetical protein SSU05_0107 99789 - 99217 - | hypothetical protein TERM 131 99966 - 99945 - H 73 -7.3 -4.16943 | opp_overlap 99945 CGGTATAGTTTAAAA GACAAGGTT TCTA AGCCTTGTC TTTTTGTTTTGAGGT TERM 132 99945 - 99966 + H 100 -9.5 -5.46706 | opp_overlap 99945 CGGTATAGTTTAAAA GACAAGGTT TCTA AGCCTTGTC TTTTTGTTTTGAGGT SSU05_0108 100018 - 100848 + | hypothetical protein SSU05_0109 101563 - 102012 + | transcriptional regulator SSU05_0110 102013 - 102717 + | ABC-type Mn/Zn transport system, ATPase component SSU05_0111 102650 - 103522 + | ABC-type Mn2+/Zn2+ transport system, permease component TERM 133 104968 - 104957 - g 78 -4.4 -5.12068 | overlap 104946 GAGAGCCAAGAAAAA CTCT TGGA AGAG TTGGAAAACTGGCCG SSU05_0112 103532 - 105043 + | ABC-type metal ion transport system, periplasmic component/surface adhesin TERM 134 105056 - 105076 + F 86 -8.3 -4.45068 | opp_overlap 105056 TAAGAATAATGAGAA GACTGGGCA AGG TGTTCAGTC TTTCTTCTTGACAAT TERM 135 105486 - 105471 - g 81 -4 -5.41143 | gap 1 CATTTTCCAAAAAAA GCCTAGA AAA TCT-GGC CAGCAAAATCTCGCA SSU05_0113 105128 - 105616 + | transcriptional regulator TERM 136 105639 - 105627 - f 75 -9.1 -3.62096 | opp_overlap 105627 CTTGATGAGTGTAAA GCTCC TGT GGAGC TTTACAGCCTACTAC TERM 137 105627 - 105639 + F 75 -9.1 -3.56092 | opp_overlap 105627 CTTGATGAGTGTAAA GCTCC TGT GGAGC TTTACAGCCTACTAC TERM 138 105723 - 105751 + G 93 -13.3 -2.65993 | opp_overlap 105731, overlap 105731 TCGCTTTATTTCCAA CCTTCAAAGGTTC CCC GAACCTTTGAAGC TAGTCTGAATCTGAT TERM 139 105731 - 105743 + G 70 -7.7 -3.5882 | opp_overlap 105731, overlap 105723 TTTCCAACCTTCAAA GGTTC CCC GAACC TTTGAAGCTAGTCTG TERM 140 105743 - 105731 - g 70 -7.7 -3.60792 | opp_overlap 105723 105731 TTTCCAACCTTCAAA GGTTC CCC GAACC TTTGAAGCTAGTCTG SSU05_0114 105633 - 105800 + | hypothetical protein SSU05_0115 105797 - 106006 + | copper chaperone TERM 141 106015 - 106030 + T 100 -10.4 -4.95806 | opp_overlap 106015 GGTATAAGCGAAAAA GCAGCC GTCG GGCTGC TTTTTATAATGCTTT TERM 142 106030 - 106015 - T 100 -10.4 -4.78149 | opp_overlap 106015 GGTATAAGCGAAAAA GCAGCC GTCG GGCTGC TTTTTATAATGCTTT SSU05_0116 106447 - 106034 - | diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases TERM 143 106458 - 106439 - G 80 -6.5 -4.84914 | ATTGATAGAACAAAA GGAAATC ATGGTG GATTTCC TTGAAAAATCTTAAT SSU05_0117 106663 - 106469 - | tyrosyl-tRNA synthetase SSU05_0118 106824 - 106681 - | tyrosyl-tRNA synthetase SSU05_0119 107728 - 106805 - | tyrosyl-tRNA synthetase SSU05_0120 107882 - 110305 + | membrane carboxypeptidase (penicillin-binding protein) TERM 144 110385 - 110427 + F 76 -4.2 -5.07275 | opp_overlap 110401, overlap 110387 TCCAAACAAGGCTTG CAGCAGTTAAATCAAACTTT TTC AAAGGAAGATTTAGCTGCTC TTTTTGTGTCTATGA TERM 145 110387 - 110425 + F 70 -6.8 -4.15325 | opp_overlap 110401, overlap 110385 CAAACAAGGCTTGCA GCAGTTAAATCAAACTTT TTC AAAGGAAGATTTAGCTGC TCTTTTTGTGTCTAT TERM 146 114300 - 114255 - g 100 -10.5 -4.60487 | gap 1, opp_overlap 114266 114267, overlap 114256 114258 114259 114267 GATGATCTTGAAAAA GCACGTGCAAAAGCCGCAGCTG ACG CAGCCGCAGCCTTTGCA-GCAG AAGAAGCAGAAGGCA TERM 147 114299 - 114256 - g 100 -14 -3.3581 | gap 1, opp_overlap 114266 114267, overlap 114255 114258 114259 114267 ATGATCTTGAAAAAG CACGTGCAAAAGCCGCAGCTG ACG CAGCCGCAGCCTTTGCA-GCA GAAGAAGCAGAAGGC TERM 148 114297 - 114258 - g 100 -16.6 -3.24422 | gap 1, opp_overlap 114266 114267, overlap 114256 114255 114259 114267 GATCTTGAAAAAGCA CGTGCAAAAGCCGCAGCTG ACG CAGCCGCAGCCTTTGCA-G CAGAAGAAGCAGAAG TERM 149 114297 - 114259 - g 100 -16.8 -2.54171 | opp_overlap 114266 114267, overlap 114258 114256 114255 114267 ATCTTGAAAAAGCAC GTGCAAAAGCCGCAGCTG ACG CAGCCGCAGCCTTTGCAG CAGAAGAAGCAGAAG TERM 150 114289 - 114267 - g 100 -13.4 -4.13304 | opp_overlap 114266 114267, overlap 114258 114259 114256 114255 AAAGCACGTGCAAAA GCCGCAGCTG ACG CAGCCGCAGC CTTTGCAGCAGAAGA rpoB 110751 - 114323 + | DNA-directed RNA polymerase subunit beta TERM 151 114424 - 114411 - f 78 -5.3 -4.99035 | opp_overlap 114411 TGATTTATAGAAAAA TAGCT TACC AGCTA TCCATTCTGCTGATT TERM 152 115369 - 115359 - g 75 -3.2 -5.1417 | opp_overlap 115366 GTACAAAACGAAAAA CGGA TGC TCCA AGAAGCTGTGGATGC SSU05_0122 114441 - 118148 + | DNA-directed RNA polymerase subunit beta' TERM 153 118159 - 118183 + F 100 -10.8 -4.87626 | opp_overlap 118154, overlap 118154 118152 AATAAATTAAGATGG CACATCTCTC TCTTT GAGGGATGTG TTTTTGATATTCGGA SSU05_0123 118274 - 118663 + | hypothetical protein TERM 154 118696 - 118669 - T 95 -8.5 -4.96523 | opp_overlap 118671, overlap 118671 AAATGAATAATAAAA GAGGATTGACC TTTGCG GGTCAATCCTT TTTAGCTGAATCTGA TERM 155 118694 - 118671 - T 89 -11.1 -4.07486 | opp_overlap 118671, overlap 118669 ATGAATAATAAAAGA GGATTGACC TTTGCG GGTCAATCC TTTTTAGCTGAATCT TERM 156 118671 - 118694 + T 95 -11.8 -4.67755 | opp_overlap 118671 118669 ATGAATAATAAAAGA GGATTGACCT TTGC GGGTCAATCC TTTTTAGCTGAATCT SSU05_0124 118934 - 118698 - | hypothetical protein SSU05_0125 119653 - 119024 - | hypothetical protein SSU05_0126 119727 - 120677 + | Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB TERM 157 121184 - 121197 + GF 78 -6.7 -4.57073 | AGGTCTTTTCCTGCT TGGCA GCTC TGCCA TTTTTCGGAAAACTC SSU05_0127 120589 - 121626 + | Type II secretory pathway, component PulF SSU05_0128 121628 - 121909 + | competence protein ComGC SSU05_0129 121890 - 122297 + | Type II secretory pathway, pseudopilin PulG SSU05_0130 122269 - 122562 + | Type II secretory pathway, pseudopilin PulG TERM 158 122874 - 122839 - g 91 -8.4 -4.64861 | gap 1, opp_overlap 122847, overlap 122865 TTTTCGGAAAACAAA TGATAGAGGCCAGGGTT ACC AACCCATG-CTCTATCA GGTGGATAGCGCAGC SSU05_0131 122549 - 122971 + | competence protein ComGF SSU05_0132 122962 - 123372 + | hypothetical protein TERM 159 123364 - 123387 + F 83 -7.4 -4.7254 | GGGCTATCATCAGAA GGAGGGTGAG TTGA CTCGTTCTCC TTTTTAGTGCAAAGT SSU05_0134 124202 - 124384 + | adenine-specific DNA methylase SSU05_0133 123430 - 124404 + | adenine-specific DNA methylase SSU05_0135 124434 - 125621 + | acetate kinase TERM 160 125656 - 125628 - f 81 -4.5 -5.38549 | opp_overlap 125632, overlap 125632 TTGAAATAAGAAAAA CTAACTGGTAGTC GGA GACTGCCAGTTTC TCTTATAGTTTATAC TERM 161 125652 - 125632 - f 85 -9.7 -3.97836 | opp_overlap 125632, overlap 125628 AATAAGAAAAACTAA CTGGTAGTC GGA GACTGCCAG TTTCTCTTATAGTTT TERM 162 125632 - 125652 + F 93 -11.9 -4.31815 | opp_overlap 125628 125632 AATAAGAAAAACTAA CTGGTAGTC GGA GACTGCCAG TTTCTCTTATAGTTT TERM 163 125666 - 125687 + F 78 -6.7 -4.58395 | overlap 125667 AGTTTCTCTTATAGT TTATACCTT TAGA AAGGTATAG TTTTTAGCAAGTGGA TERM 164 125905 - 125929 + G 85 -5.7 -5.24129 | opp_overlap 125906, overlap 125886 125906 TCGAATACACACGAC AGCTCCATTTT TTG AAAAAGGAGCA TTTTTTATGGAAAAG TERM 165 125906 - 125928 + G 78 -9.2 -3.73995 | opp_overlap 125906, overlap 125886 125905 CGAATACACACGACA GCTCCATTTT TTG AAAAAGGAGC ATTTTTTATGGAAAA TERM 166 125928 - 125906 - g 71 -9.2 -2.92255 | opp_overlap 125886 125906 125905 CGAATACACACGACA GCTCCATTTT TTG AAAAAGGAGC ATTTTTTATGGAAAA SSU05_0136 125744 - 126487 + | hypothetical protein TERM 167 126499 - 126521 + F 75 -9.2 -3.1733 | opp_overlap 126499 126503, overlap 126497 126496 ATAAAACAGTATCAA GCAACAGG TCATCCC CCTGTTGC TACTTTTGTAGAGAG TERM 168 126521 - 126499 - f 76 -9.2 -3.3341 | opp_overlap 126499 126497 126496, overlap 126503 ATAAAACAGTATCAA GCAACAGG TCATCCC CCTGTTGC TACTTTTGTAGAGAG SSU05_0137 126543 - 127799 + | putative folylpolyglutamate synthetase TERM 169 127795 - 127851 + T 78 -9.7 -3.43756 | opp_overlap 127808 127810, overlap 127803 127808 TTTTAGAAGAACTTG TATAGAAAAAAAAGGCTTTGCCGGG CATTCAA CCCAGCAAAGTCTTTTGTTTTAATA ATTTTTAATCAAATC TERM 170 127803 - 127843 + T 90 -9.1 -4.45077 | opp_overlap 127808 127810, overlap 127795 127808 GAACTTGTATAGAAA AAAAAGGCTTTGCCGGG CATTCAA CCCAGCAAAGTCTTTTG TTTTAATAATTTTTA TERM 171 127838 - 127808 - T 100 -9.7 -6.02914 | opp_overlap 127803 127795 127808, overlap 127810 TGTATAGAAAAAAAA GGCTTTGCCGGGC ATTCA ACCCAGCAAAGTC TTTTGTTTTAATAAT TERM 172 127808 - 127838 + T 100 -9 -5.14626 | opp_overlap 127808 127810, overlap 127803 127795 TGTATAGAAAAAAAA GGCTTTGCCGGG CATTCAA CCCAGCAAAGTC TTTTGTTTTAATAAT TERM 173 127836 - 127810 - T 79 -10.9 -3.10446 | opp_overlap 127808 127803 127795, overlap 127808 TATAGAAAAAAAAGG CTTTGCCGGGC ATTCA ACCCAGCAAAG TCTTTTGTTTTAATA SSU05_0138 128907 - 127846 - | cellulase M-like protein TERM 174 129382 - 129396 + H 76 -10 -2.9914 | overlap 129378 ACCATTACCTTTGTT GCGAAC ATT GTTCGC TCTATCTCCAACCTC TERM 175 129458 - 129475 + H 76 -7.7 -4.18018 | opp_overlap 129458 TGGGTGAGACTGAAA CGGTCTG GGAA TAGACCG TTTTAGCTCAACAAC TERM 176 129569 - 129546 - H 100 -8.2 -5.07652 | gap 1, opp_overlap 129546 129547, overlap 129547 CGCTCCAAAAGAAAA CCCTCAACGCT GGT AACGTTG-GGG CATTTTGATTGCCAA TERM 177 129569 - 129547 - H 72 -8.4 -3.63868 | opp_overlap 129546 129547, overlap 129546 GCTCCAAAAGAAAAC CCTCAACGCT GGT AACGTTGGGG CATTTTGATTGCCAA SSU05_0139 129644 - 130009 + | hypothetical protein SSU05_0140 130006 - 130326 + | Thiol-disulfide isomerase and thioredoxin TERM 178 130345 - 130331 - f 76 -10 -3.06418 | opp_overlap 130329, overlap 130328 TGGGTAGATAAATTA GCAGAG AAG CTCTGC CATTTCCCAAAAGAA SSU05_0141 130371 - 131327 + | hypothetical protein SSU05_0142 131346 - 131969 + | EMAP domain-containing protein TERM 179 132002 - 131975 - Tf 75 -5.6 -4.8543 | opp_overlap 131978, overlap 131978 GAAGGGGTAGAAAAA GAAGAATTGGTC AGGT GGCCAATTCTTT TATGCTGGTTCAATT TERM 180 131978 - 131999 + TF 91 -9.5 -4.51097 | opp_overlap 131975 131978 GGGGTAGAAAAAGAA GAATTGGTC AGGT GGCCAATTC TTTTATGCTGGTTCA TERM 181 131999 - 131978 - Tf 79 -7.3 -4.52873 | opp_overlap 131978, overlap 131975 GGGGTAGAAAAAGAA GAATTGGTC AGGT GGCCAATTC TTTTATGCTGGTTCA SSU05_0144 132781 - 132002 - | hypothetical protein SSU05_0143 132071 - 132184 + | hypothetical protein SSU05_0145 132836 - 133231 + | single-strand DNA-binding protein TERM 182 133321 - 133338 + T 84 -7.7 -4.71382 | opp_overlap 133321 ATATCTCCTTAAAAA CACCGAC GAAA GTTGGTG TTTTTGGCTACTTAT TERM 183 133338 - 133321 - T 73 -5.5 -4.57837 | opp_overlap 133321 ATATCTCCTTAAAAA CACCGAC GAAA GTTGGTG TTTTTGGCTACTTAT SSU05_0146 133595 - 133350 - | hypothetical protein groES 133766 - 134074 + | co-chaperonin GroES SSU05_0148 134085 - 134945 + | putative chaperonin GroEL SSU05_0149 134961 - 135713 + | GroEL TERM 184 135722 - 135739 + F 100 -7.7 -5.7946 | opp_overlap 135720 135722 AAAATAGCAAAATGA CACAGCT ACTT GGCTGTG TTTTTTTCTTGAAAA TERM 185 136093 - 136038 - g 71 -3.2 -5.04987 | opp_overlap 136050, overlap 136050 AACAGCCGTAAAAAA GTTCAAACAAACGTTTCATCACCACA AAAA CGCGGTGTTGCAACTCGTGTCGGAAC AATGACACCTAAAAA rpsL 135939 - 136352 + | 30S ribosomal protein S12 TERM 186 136398 - 136387 - g 70 -7.2 -3.81256 | AGTCGTAAAAATCAA GCGC CTAA GCGC GAAGTATTGCCAGAT SSU05_0151 136369 - 136839 + | 30S ribosomal protein S7 TERM 187 137314 - 137336 + F 100 -12.7 -4.66987 | opp_overlap 137314 TTAGTAAGAACTTAA GCGGGTGGG ATTTG CCCACTCGC TTTTCTTAAAATATG TERM 188 137336 - 137314 - f 80 -10.5 -3.30203 | opp_overlap 137314 TTAGTAAGAACTTAA GCGGGTGGG ATTTG CCCACTCGC TTTTCTTAAAATATG SSU05_0152 137396 - 139477 + | elongation factor G TERM 189 139489 - 139508 + TF 100 -12.2 -5.52384 | ATAATTGTCTATCTA CACCTACC TTCG GGTAGGTG TTTTTTTGGTACGAC TERM 190 139691 - 139705 + TF 80 -8.6 -3.94 | overlap 139688 TGCTTCGACGAGCGA GGAAAC TTC GTTTCC TTATTTCCAACTTCA TERM 191 139770 - 139786 + TF 71 -7.3 -3.91716 | GTACTTTACAGAAGT GATTTGC GAG GCAAGTC TTATTTCCAACCTAG TERM 192 139820 - 139801 - Tf 82 -12.2 -2.53263 | opp_overlap 139804, overlap 139804 CTTATTTCCAACCTA GAACAGCC TTTA GGCTGTTC TAGCAACTTGCAGCT TERM 193 139817 - 139804 - Tf 70 -8.1 -3.42056 | opp_overlap 139804, overlap 139801 ATTTCCAACCTAGAA CAGCC TTTA GGCTG TTCTAGCAACTTGCA TERM 194 139804 - 139817 + TF 70 -8.1 -3.31322 | opp_overlap 139804 139801 ATTTCCAACCTAGAA CAGCC TTTA GGCTG TTCTAGCAACTTGCA SSU05_0154 140533 - 140438 - | hypothetical protein TERM 195 140499 - 140512 + gF 70 -8.1 -3.3422 | overlap 140498 TTTTCATTAGTAGCA GTCGC CTGT GCGAC ATTTTTGACAGCCTG TERM 196 141055 - 141045 - gH 75 -3.2 -5.18355 | TTGAAAAATCAAAAA GCCT TTA AAGC CTATCTGCAGGAAGT TERM 197 141476 - 141446 - gH 73 -9.6 -2.89255 | overlap 141441 141443 AAAAGCGAAATACGA CGGCGTAGCAACCG GTG CGGTAGATACTCCG AGTCAGAAAGAAGTT SSU05_0153 140517 - 142346 + | metalloendopeptidase TERM 198 142470 - 142502 + FH 100 -14.9 -4.65895 | opp_overlap 142463 142470 GTAAAAGATTATAGA GGTGTCTGCGGTCCA AAA TGGGCGGTAGACACC TTTTTAGGTAAAAAA TERM 199 142502 - 142470 - fH 78 -10.5 -3.05807 | opp_overlap 142470, overlap 142463 GTAAAAGATTATAGA GGTGTCTGCGGTCCA AAA TGGGCGGTAGACACC TTTTTAGGTAAAAAA SSU05_0155 142727 - 143833 + | glyceraldehyde-3-phosphate dehydrogenase TERM 200 143852 - 143865 + F 100 -8.1 -5.85244 | opp_overlap 143848 143847 143852, overlap 143847 143846 TTAGTGAAAATCGAA GAGGC TTCG GCCTC TTTTTTGTTTTGATT TERM 201 143865 - 143852 - f 70 -8.1 -3.38281 | opp_overlap 143847 143846 143852, overlap 143848 143847 TTAGTGAAAATCGAA GAGGC TTCG GCCTC TTTTTTGTTTTGATT SSU05_0156 143940 - 144047 + | hypothetical protein pgk 144089 - 145288 + | phosphoglycerate kinase TERM 202 145439 - 145397 - f 78 -10.1 -3.45027 | gap 1, opp_overlap 145410, overlap 145404 145410 ACTGCGTATGAAAGA TGAACGATGAAAAGAGTTGG GAGA CCAACTCTTTTC-TAGTACA AAGGCTAGATTTTCT TERM 203 145433 - 145404 - f 84 -12.3 -2.87822 | opp_overlap 145410, overlap 145397 145410 ATGAAAGATGAACGA TGAAAAGAGTTGG GAGA CCAACTCTTTTCT AGTACAAAGGCTAGA TERM 204 145427 - 145410 - f 91 -9.9 -4.36411 | opp_overlap 145410, overlap 145404 145397 GATGAACGATGAAAA GAGTTGG GAGA CCAACTC TTTTCTAGTACAAAG TERM 205 145410 - 145427 + F 91 -9.9 -4.46212 | opp_overlap 145410 145404 145397 GATGAACGATGAAAA GAGTTGG GAGA CCAACTC TTTTCTAGTACAAAG TERM 206 145519 - 145500 - f 93 -12.2 -4.24404 | opp_overlap 145500 AGGTAAAGGCTAAAA TGCAACGG ATTT CCGTTGCA TTTTGTGCATCGCGT TERM 207 145500 - 145519 + F 100 -12.2 -4.42653 | opp_overlap 145500 AGGTAAAGGCTAAAA TGCAACGG ATTT CCGTTGCA TTTTGTGCATCGCGT TERM 208 145831 - 145805 - f 77 -11 -2.57132 | opp_overlap 145811, overlap 145804 145811 TTTCTTGGTGACAAC TTCAAATAGTCC ACT GGGCTATTTGAA CCCCGCAAGGCTGAA TERM 209 145921 - 145901 - f 77 -2.5 -5.59564 | opp_overlap 145899 145901 ATAAATGTAAAAAAA GACGTTG TTTTTTG CAGCGTC TATTTGTTTGTCTTA SSU05_0158 146095 - 146610 + | hypothetical protein TERM 210 146630 - 146608 - f 89 -10.8 -3.96148 | opp_overlap 146606 CGTTTTCAGGATAAA TGATGTTATA AAA TATAACATCA CCTATTGACCTCAAA TERM 211 147007 - 147019 + G 76 -7.7 -4.15833 | opp_overlap 147006 ACATGATGAATTCAG TCGTC AGG GACGA TTTTCAAGTCCTAGT SSU05_0159 146876 - 147055 + | transcriptional regulator SSU05_0160 147084 - 148430 + | glutamine synthetase TERM 212 148455 - 148432 - T 100 -15.4 -3.78022 | opp_overlap 148436, overlap 148436 TGGATATGTATTAAA CAAAGGACCC CGAC GGGTCCTTTG TTCACGAGCCGAGAA TERM 213 148451 - 148436 - T 95 -10.4 -4.50627 | opp_overlap 148436, overlap 148432 TATGTATTAAACAAA GGACCC CGAC GGGTCC TTTGTTCACGAGCCG TERM 214 148436 - 148451 + T 89 -10.4 -4.15044 | opp_overlap 148436 148432 TATGTATTAAACAAA GGACCC CGAC GGGTCC TTTGTTCACGAGCCG TERM 215 148620 - 148642 + T 100 -16.4 -4.44819 | opp_overlap 148620 TTAATATAAAATAAA TCCCAGAGGT TTC ACCTCTGGGA TTTTAGTGTGTTATC TERM 216 148642 - 148620 - T 100 -16.4 -4.88163 | opp_overlap 148620 TTAATATAAAATAAA TCCCAGAGGT TTC ACCTCTGGGA TTTTAGTGTGTTATC SSU05_0161 150332 - 148653 - | metallo-beta-lactamase superfamily hydrolase SSU05_0162 150599 - 150336 - | hypothetical protein SSU05_0163 150791 - 150693 - | hypothetical protein TERM 217 150973 - 150963 - H 72 -4 -5.06451 | CATTATTTGAAAAAA TATC CAA GATA GCTTACAATAGAGAG TERM 218 151282 - 151303 + G 81 -5.1 -5.14563 | opp_overlap 151282 AGAAAAATCATAGTA TCAGCCTCA TGCC TGTGGTTGA TTTTTTGGTAGCGCA SSU05_0164 151173 - 151856 + | putative molecular chaperone SSU05_0165 151853 - 152293 + | acetyltransferase SSU05_0166 152280 - 153290 + | O-sialoglycoprotein endopeptidase TERM 219 153325 - 153299 - T 100 -11 -5.24796 | opp_overlap 153299 TTTATAGAATAAAAA CCTCTTACGT CAAGGAT ACGTAAGAGG TTTATTTGTGGATTT TERM 220 153299 - 153325 + T 95 -11 -4.59993 | opp_overlap 153299 TTTATAGAATAAAAA CCTCTTACGT CAAGGAT ACGTAAGAGG TTTATTTGTGGATTT SSU05_0167 154175 - 153327 - | transcriptional regulator TERM 221 154275 - 154254 - g 82 -2.3 -5.59502 | opp_overlap 154270, overlap 154264 154265 154269 GAAAAAATTAAAAAA TATCCCAAA ATCA TATGGAATA TGTCAAATATTCCTA SSU05_0168 154225 - 155079 + | ABC-type sugar transport system, periplasmic component TERM 222 155605 - 155589 - g 71 -4.4 -4.83615 | overlap 155601 TATCTTGGAGAAAAA GCAACT GAAGA AGCTGC CAAAGAAACAGCTGA SSU05_0169 155076 - 155654 + | ABC-type sugar transport system, periplasmic component TERM 223 155658 - 155693 + F 93 -11.9 -3.65046 | overlap 155661 ACTGAAAAATAGGTA GGAGGTCTTGGGAAG TTGATT CTTCCCCGGACCTTC TTATTAAAATGAAGA TERM 224 155661 - 155690 + F 85 -10 -3.96068 | overlap 155658 GAAAAATAGGTAGGA GGTCTTGGGAAG TTGATT CTTCCCCGGACC TTCTTATTAAAATGA SSU05_0170 155702 - 156616 + | ABC-type sugar transport system, permease component SSU05_0171 156627 - 157457 + | ABC-type sugar transport system, permease component SSU05_0172 157467 - 159668 + | Alpha-galactosidase TERM 225 159681 - 159705 + GF 100 -12.9 -4.37092 | TAGCATCCCTATTCC TAGGCCCAGCT ATC GGCTGGGTCTA TTTTATGCAGAAAGT SSU05_0173 159638 - 159730 + | hypothetical protein SSU05_0174 159943 - 160644 + | putative integral membrane protein; branched-chain amino acid permease SSU05_0175 160628 - 160954 + | hypothetical protein SSU05_0176 160964 - 161986 + | hypothetical protein TERM 226 162253 - 162217 - f 89 -6 -5.41746 | AATTTTTCAAAAAAA CCTCAAAAATAACAGA TTTTT TCTTGTATCTTTGAGG CATAAGGAGTATAAT TERM 227 162839 - 162851 + G 71 -4.1 -4.79223 | GATAATAAGATTTAT CGTGT TGT ATACG TTTTTGGTAATGTAG TERM 228 162913 - 162901 - g 80 -6.3 -4.89521 | opp_overlap 162901 AGATGGTAAACAAAA TGTTG CTC CAACA TTTAACAGAAATGAT SSU05_0177 162449 - 164980 + | extracellular protein TERM 229 165213 - 165202 - g 72 -7.2 -4.0162 | opp_overlap 165202 TCGGCAGAGGACAAA GGCG TAGG CGCC ATCGCCAAAGACATT SSU05_0178 165085 - 165549 + | Epf-like protein SSU05_0179 165583 - 166143 + | RTX family exoprotein A gene TERM 230 166278 - 166299 + T 100 -11.7 -5.52384 | opp_overlap 166278 ATCGAACCCCCAAAA TCCAAAGTC ATTC GACTTTGGA TTTTTTTGATACGAC TERM 231 166299 - 166278 - T 91 -11.7 -4.1466 | opp_overlap 166278 ATCGAACCCCCAAAA TCCAAAGTC ATTC GACTTTGGA TTTTTTTGATACGAC TERM 232 166327 - 166367 + T 75 -9.2 -3.2032 | gap 1, opp_overlap 166336, overlap 166336 GACATGCTCGTCATA CCTAAAAAACAGCCTTCTC TTGC GAGA-GGCTGTTTTTCATG CTTTTAATCTAAAAG TERM 233 166336 - 166358 + T 95 -8.5 -4.86773 | gap 1, opp_overlap 166336, overlap 166327 GTCATACCTAAAAAA CAGCCTTCTC TTGC GAGA-GGCTG TTTTTCATGCTTTTA TERM 234 166358 - 166336 - T 100 -8.5 -5.1287 | gap 1, opp_overlap 166336 166327 GTCATACCTAAAAAA CAGCCTTCTC TTGC GAGA-GGCTG TTTTTCATGCTTTTA SSU05_0180 167985 - 166363 - | hypothetical protein TERM 235 167370 - 167338 - G 78 -4.1 -5.18409 | TAAAACAAAAACAAA CGCGATCCATAGC CAAGCAT GCCACGAATTGCG ACGGGAAAAGATACG SSU05_0181 168597 - 167995 - | ABC-type multidrug transport system, ATPase component TERM 236 168778 - 168742 - RH 100 -10.4 -5.60689 | opp_overlap 168750, overlap 168750 TCATACAATAAAAAA CAAAAAAATTCAAGCA GTTTT TGCTTGAATTTTTCAG TCATTAAATAATTAG TERM 237 168770 - 168750 - RH 100 -8.4 -6.28401 | opp_overlap 168750, overlap 168742 TAAAAAACAAAAAAA TTCAAGCA GTTTT TGCTTGAA TTTTTCAGTCATTAA TERM 238 168750 - 168770 + rH 90 -9.1 -4.7078 | opp_overlap 168742 168750 TAAAAAACAAAAAAA TTCAAGCAG TTT TTGCTTGAA TTTTTCAGTCATTAA TERM 239 168857 - 168829 - RH 95 -14.7 -2.66912 | opp_overlap 168837, overlap 168837 ATCGAACTCAGACTA GCTCCAAAGGTTC GGG GAACCTTTGGAGG TTGGAGATAAGGCGA TERM 240 168883 - 168869 - RH 74 -10 -2.6914 | overlap 168868 GAGGTTGGAGATAAG GCGAAC AAA GTTCGC TACAAAAAGGTTCGG TERM 241 168904 - 168892 - RH 88 -7.7 -4.83169 | opp_overlap 168892 AGTTCGCTACAAAAA GGTTC GGG GAACC TTTGGAGGTTGGAGA TERM 242 169006 - 168994 - RH 75 -9.1 -3.56092 | opp_overlap 168994 GTAGCAGGCTGTAAA GCTCC ACT GGAGC TTTACAATCATCAAA TERM 243 168994 - 169006 + rH 75 -9.1 -3.62096 | opp_overlap 168994 GTAGCAGGCTGTAAA GCTCC ACT GGAGC TTTACAATCATCAAA SSU05_0183 170223 - 169048 - | flavoprotein TERM 244 169361 - 169351 - GH 73 -5.4 -4.65895 | opp_overlap 169354, overlap 169352 GTTTTCAGCGAAAAA GTCT GCT AGAC GGTCTGGCATGAGTT SSU05_0182 169420 - 170100 + | hypothetical protein SSU05_0184 170461 - 171273 + | Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase SSU05_0185 171402 - 171911 + | Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase TERM 245 172210 - 172188 - g 71 -3.4 -4.9725 | overlap 172191 ATTTGTAGATAAAAA TGACAAGGGT GTG ACCGTTGTAA ATCGTGCTGGCTTGA SSU05_0186 171982 - 172575 + | hypothetical protein TERM 246 172597 - 172573 - f 100 -14.5 -3.55444 | opp_overlap 172579, overlap 172579 CGTTTATTTGGGAAA TAAAAAGGTCC GGG GGACCTTTTTA TCATGAGCTTGAAAA TERM 247 172579 - 172591 + F 100 -9.1 -4.91511 | opp_overlap 172573 172579 TTTGGGAAATAAAAA GGTCC GGG GGACC TTTTTATCATGAGCT TERM 248 172591 - 172579 - f 100 -9.1 -5.27335 | opp_overlap 172579, overlap 172573 TTTGGGAAATAAAAA GGTCC GGG GGACC TTTTTATCATGAGCT TERM 249 172709 - 172726 + F 100 -8.5 -5.38497 | opp_overlap 172709, overlap 172701 TATGTGATATAAAAA GATTGGT GGGA ACCAATC TTTTTTAGTTTAAGT TERM 250 172726 - 172709 - f 95 -8.5 -4.9792 | opp_overlap 172709 172701 TATGTGATATAAAAA GATTGGT GGGA ACCAATC TTTTTTAGTTTAAGT SSU05_0187 172843 - 174885 + | transcriptional antiterminator SSU05_0188 174887 - 175171 + | phosphotransferase system, galactitol-specific IIB component TERM 251 175396 - 175411 + G 78 -9 -3.76781 | overlap 175410 AGCGAATATTATTGT TGGCTC GCTT GAGCCA TTTGGTCAAATGTTT ulaA 175226 - 176572 + | ascorbate-specific PTS system enzyme IIC TERM 252 176710 - 176743 + F 100 -19.9 -3.28712 | opp_overlap 176716, overlap 176716 TGGCTGCTCTATATG GAGAAATTCTGGACA TTCG TGTCCAGAATTTCTC TTCTAAGGAGCGGGA TERM 253 176716 - 176737 + F 91 -11.7 -4.27117 | opp_overlap 176716, overlap 176710 CTCTATATGGAGAAA TTCTGGACA TTCG TGTCCAGAA TTTCTCTTCTAAGGA TERM 254 176737 - 176716 - f 91 -11.7 -3.95073 | opp_overlap 176716 176710 CTCTATATGGAGAAA TTCTGGACA TTCG TGTCCAGAA TTTCTCTTCTAAGGA TERM 255 178447 - 178425 - f 81 -8.5 -4.29929 | opp_overlap 178425 ATCAAATGTAAGAAA TCAAGCTCC ACTTA GGAACTTGA TTTTTTCTATACTTC TERM 256 178425 - 178447 + F 89 -6.3 -5.42131 | opp_overlap 178425 ATCAAATGTAAGAAA TCAAGCTCC ACTTA GGAACTTGA TTTTTTCTATACTTC SSU05_0192 178444 - 178539 + | hypothetical protein TERM 257 178696 - 178718 + G 84 -9.9 -3.74251 | GGCATGCCTACCTTT CACCGACGA ATTTG TTGTCGGTG TTTGCTGAAAATCTG SSU05_0193 178536 - 180296 + | glycerophosphoryl diester phosphodiesterase TERM 258 180332 - 180302 - T 81 -6.9 -4.67607 | gap 2, opp_overlap 180304, overlap 180304 TTTTGAATAAACAAA GAGACGCGA--GGGC CTG GCCCAATCGCGTCTT TTCTGTCTTAAAAAG TERM 259 180330 - 180304 - T 83 -9.5 -3.94772 | gap 2, opp_overlap 180304, overlap 180302 TTGAATAAACAAAGA GACGCGA--GGGC CTG GCCCAATCGCGTC TTTTCTGTCTTAAAA TERM 260 180304 - 180330 + T 91 -9.5 -4.67943 | gap 2, opp_overlap 180302 180304 TTGAATAAACAAAGA GACGCGA--GGGC CTG GCCCAATCGCGTC TTTTCTGTCTTAAAA TERM 261 180357 - 180347 - T 73 -5.4 -4.56597 | TTTCTGTCTTAAAAA GGTA ATT TACC TGCAAAGGCACCTAG SSU05_0194 180639 - 180340 - | hypothetical protein TERM 262 180886 - 180873 - H 91 -6.7 -5.31072 | overlap 180883 ATAATATAAGAAAAA CTGGT TATA ACCAG AAATCCCGGGGGGGG SSU05_0195 180939 - 182075 + | phosphosugar isomerase TERM 263 183167 - 183127 - g 73 -5.3 -4.61162 | overlap 183120 183128 AGACGAAAGAAGAAA CTCCAACTCCAGTACCGGA CAC TCCGGCACCGAAAGAGGAC GAAGTTCCGGCACCA TERM 264 183166 - 183128 - g 71 -8.8 -3.35071 | overlap 183120 183127 GACGAAAGAAGAAAC TCCAACTCCAGTACCGGA CAC TCCGGCACCGAAAGAGGA CGAAGTTCCGGCACC SSU05_0196 182205 - 183890 + | hypothetical protein TERM 265 183910 - 183935 + T 100 -16.1 -4.59773 | opp_overlap 183910 TTATGAAATAATAAA GAGGCAGGGCG GAAA CGCCCAGCCTC TTTTTAGAACTGAAA TERM 266 183935 - 183910 - T 100 -16.1 -4.60258 | opp_overlap 183910 TTATGAAATAATAAA GAGGCAGGGCG GAAA CGCCCAGCCTC TTTTTAGAACTGAAA SSU05_0197 186434 - 184167 - | x-prolyl-dipeptidyl aminopeptidase TERM 267 184472 - 184517 + g 90 -4.1 -5.67283 | gap 1, overlap 184473 CATGGTAACGACCGT TGTCTAGACTCAAT-CTTGC TTTAGGC GCAGGGATTGGGGCTAGGCG TTTTTTATTTCCCTT TERM 268 185268 - 185286 + g 91 -10.2 -4.12188 | overlap 185269 GCCTGGATAGCCACC AGGGCTGG TCA CCAGCCCG TTTTCACGGTAGTAG TERM 269 185269 - 185285 + g 100 -13.7 -3.06991 | overlap 185268 CCTGGATAGCCACCA GGGCTGG TCA CCAGCCC GTTTTCACGGTAGTA SSU05_0198 186604 - 187350 + | methyl-accepting chemotaxis protein TERM 270 187407 - 187417 + F 84 -3.2 -5.67967 | overlap 187380 GGAGTATATCCTGGT GTCA GTC TGGC TTTTTTTCTGATGGT TERM 271 188162 - 188177 + G 78 -5.4 -4.9792 | overlap 188164 ATGTATAACCGTCCC TTGCAG AAAG CTGCGA TTTTTCTCTCGAATC SSU05_0199 187490 - 188293 + | Beta-lactamase class C and other penicillin binding proteins TERM 272 188439 - 188453 + T 80 -8.6 -3.94 | overlap 188421 188436 TACTTCGACGATCGA GGAAAC ATC GTTTCC TTATTTCCAACTTCA TERM 273 188659 - 188688 + T 76 -10.1 -3.03554 | opp_overlap 188664, overlap 188664 GATTTTTCGACATAG TAAAAGGACCTGC ATGT GCAAGTCCTTTTG TGTCTGCTTGATTAA TERM 274 188664 - 188683 + T 84 -7.8 -4.64591 | opp_overlap 188664, overlap 188659 TTCGACATAGTAAAA GGACCTGC ATGT GCAAGTCC TTTTGTGTCTGCTTG TERM 275 188683 - 188664 - T 91 -10 -4.39166 | opp_overlap 188664 188659 TTCGACATAGTAAAA GGACCTGC ATGT GCAAGTCC TTTTGTGTCTGCTTG SSU05_0200 191045 - 188700 - | pyruvate-formate lyase SSU05_0201 191416 - 192429 + | DNA polymerase IV SSU05_0202 192497 - 192814 + | transcriptional regulator TERM 276 193020 - 193034 + F 81 -4.3 -5.30575 | opp_overlap 193020 GTACTGGTTAGTGAA TCATC CTTGT GATGA TTTTTTAAATTTTTG TERM 277 193115 - 193105 - f 70 -5.4 -4.42062 | overlap 193106 TACGTTGTAAATAAA GTTG TTA CAAC AAAACAAGTGAGGTA SSU05_0203 193136 - 193312 + | putative NADH-flavin reductase SSU05_0204 193299 - 193763 + | putative NADH-flavin reductase TERM 278 193783 - 193805 + F 81 -2.7 -5.77571 | opp_overlap 193783 TTAAATGGTCTAAAA GATAGCTCC ATCGA GGAATTATC TTTTTATTTTTTACT TERM 279 193865 - 193855 - f 84 -4.6 -5.48028 | overlap 193858 TAAATAAAAAGAAAA GGAG AAC CCCC ATGATTCACTTGATT SSU05_0205 193866 - 194081 + | fructose-1-phosphate kinase-like protein SSU05_0206 194107 - 194787 + | fructose-1-phosphate kinase-like protein SSU05_0207 194790 - 194924 + | hypothetical protein SSU05_0208 194899 - 195477 + | hypothetical protein SSU05_0209 195576 - 195478 - | hypothetical protein SSU05_0210 196392 - 195760 - | transcriptional regulator/sugar kinase SSU05_0211 196959 - 196495 - | transcriptional regulator/sugar kinase SSU05_0212 197107 - 198480 + | phosphotransferase system cellobiose-specific component IIC SSU05_0213 198461 - 200371 + | hypothetical protein TERM 280 200420 - 200391 - f 100 -11.6 -5.252 | opp_overlap 200418 GAGTTGTAGAAAAAA GCCAATTCACAA TTTATT TTGCGAATTGGC TTGAAGTCTAATATA TERM 281 200514 - 200504 - g 86 -2.6 -5.84381 | overlap 200496 TTATGAATAAAAAAA TTTT TTT AAAA TCAGCGATTATTTTG SSU05_0214 200491 - 204207 + | ABC-type xylose transport system, periplasmic component TERM 282 204724 - 204740 + G 71 -9.5 -3.01712 | opp_overlap 204722 204719 204733 GATGGGATAATTATT TCTACTG AAT CAGTAGA TATTACCGAGGAAAC SSU05_0215 204226 - 204987 + | hypothetical protein TERM 283 205012 - 205032 + F 72 -8.5 -3.54459 | opp_overlap 205016 ATTGACAATCTAGAG TTAACAAAA ATT TTTTGTTAA TTTAAAAGGAATTGG SSU05_0216 205204 - 205968 + | putative ABC-transport protein, membrane component SSU05_0217 205953 - 206735 + | ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component TERM 284 207585 - 207572 - g 71 -6.7 -4.15508 | AAGGAAGTTTCAAAA TGGGT TGCT ACCCA AATCGGTTCAGATAT SSU05_0218 206774 - 207805 + | ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component SSU05_0219 207899 - 208708 + | 6-phosphogluconolactonase/glucosamine-6-phosphate isomerase/deaminase TERM 285 208770 - 208787 + F 100 -8.5 -5.52384 | opp_overlap 208770 TGATCAGATACCTAA TGAGAGA GGAT TCTCTCA TTTTTTTAATCAAAA TERM 286 209330 - 209318 - gf 88 -7.7 -4.7373 | opp_overlap 209316 209318 GCATTTTATCAAAAA GGGTT TAA AACCC TGTTTGCCGGTCATC SSU05_0220 209189 - 209941 + | cation transport ATPase SSU05_0221 209809 - 209997 + | cation transport ATPase TERM 287 210670 - 210647 - g 81 -4.4 -5.35354 | GAGATAATGAAAAAA CTGCCCAGGC TATT GCCAAGGAAG TCGGCATTGAGCAGG SSU05_0222 209998 - 210960 + | cation transport ATPase SSU05_0223 211493 - 210999 - | exonuclease V subunit alpha SSU05_0224 213567 - 211546 - | exonuclease V subunit alpha TERM 288 212557 - 212569 + g 71 -3.3 -5.0538 | overlap 212558 GTCTGCGCGTGGGAA GGGCT TGA AGCCG TTTTTTCCCATCAGG TERM 289 213623 - 213569 - R 100 -17.4 -3.57144 | opp_overlap 213589, overlap 213571 213589 CCCCTCACTTCCAAA TATGCAGGTTCGGGCTAAAATAGTCC ACT GGACTATTTTACTCCCAACCCGCACA GCTCCAACAGTCCAG TERM 290 213621 - 213571 - R 100 -17.8 -3.36515 | opp_overlap 213589, overlap 213569 213589 CCTCACTTCCAAATA TGCAGGTTCGGGCTAAAATAGTCC ACT GGACTATTTTACTCCCAACCCGCA CAGCTCCAACAGTCC TERM 291 213589 - 213603 + r 83 -8.6 -4.25104 | opp_overlap 213589 213571 213569 AGGTTCGGGCTAAAA TAGTCC ACT GGACTA TTTTACTCCCAACCC TERM 292 213603 - 213589 - R 81 -8.6 -4.07687 | opp_overlap 213589, overlap 213571 213569 AGGTTCGGGCTAAAA TAGTCC ACT GGACTA TTTTACTCCCAACCC SSU05_0225 214359 - 213730 - | Signal peptidase I SSU05_0226 215277 - 214369 - | ribonuclease HIII TERM 293 214865 - 214886 + g 84 -3.7 -5.44721 | AAGAGAGGGGCGATT TGGCAGATT TTTT GGTCTGTCA TTTTTTTGGAATCAT TERM 294 215204 - 215220 + g 73 -5.1 -4.72272 | overlap 215207 CGATAGCGGTCATAG TGAGCCA TCA TGGCTTG TTTTTGCTGGGCAGA TERM 295 215207 - 215217 + g 76 -6.8 -4.47707 | overlap 215204 TAGCGGTCATAGTGA GCCA TCA TGGC TTGTTTTTGCTGGGC SSU05_0227 215367 - 215525 + | dehydrogenase and related proteins TERM 296 216031 - 216017 - g 78 -5.6 -4.75372 | overlap 216018 ATGATGCAGGAAAAA TGGCGA CCA TCGCCC TGACCCTCCATGCCA TERM 297 216030 - 216018 - g 73 -9.1 -3.445 | overlap 216017 TGATGCAGGAAAAAT GGCGA CCA TCGCC CTGACCCTCCATGCC SSU05_0228 215527 - 216327 + | dehydrogenase and related proteins TERM 298 216354 - 216399 + F 95 -7.1 -5.33848 | gap 1 ATCCGAAAATAGAAA TGAGAGTGAGTTAGTAG-CCAA TTG TTGGATTACTGCCTTACTCTTA TTTTTTACTTATAGT TERM 299 216770 - 216750 - g 82 -8.4 -4.33997 | opp_overlap 216749 216753, overlap 216747 CATGAAAAACAATAA GAAGATGT TATAC ACATCTTC ATTGGCTCTTTCCCT SSU05_0229 216676 - 217707 + | LysM repeat-containing protein TERM 300 217715 - 217752 + T 81 -8.6 -4.15632 | opp_overlap 217719, overlap 217719 217722 TTAATTAGACTTACA AAAATAACCGTTTCAG CCTTAT CTGAAACGGTTATTGC TTTATATGTAGTAAT TERM 301 217719 - 217748 + T 100 -13.8 -3.67481 | opp_overlap 217719, overlap 217715 217722 TTAGACTTACAAAAA TAACCGTTTCAG CCTTAT CTGAAACGGTTA TTGCTTTATATGTAG TERM 302 217748 - 217719 - T 100 -13.8 -4.89852 | opp_overlap 217715 217719 217722 TTAGACTTACAAAAA TAACCGTTTCAG CCTTAT CTGAAACGGTTA TTGCTTTATATGTAG TERM 303 217722 - 217745 + T 89 -11.1 -3.95007 | opp_overlap 217719, overlap 217719 217715 GACTTACAAAAATAA CCGTTTCAG CCTTAT CTGAAACGG TTATTGCTTTATATG TERM 304 217818 - 217837 + T 82 -12.2 -2.53263 | opp_overlap 217821 217823 217824, overlap 217821 AGGTGCAGGTAGCTA GAACAGCC TAGA GGCTGTTC TAGGTTGGAAATAAG TERM 305 217834 - 217821 - T 70 -8.1 -3.36878 | opp_overlap 217818 217821, overlap 217823 217824 TGCAGGTAGCTAGAA CAGCC TAGA GGCTG TTCTAGGTTGGAAAT TERM 306 217821 - 217834 + T 70 -8.1 -3.42056 | opp_overlap 217821 217823 217824, overlap 217818 TGCAGGTAGCTAGAA CAGCC TAGA GGCTG TTCTAGGTTGGAAAT TERM 307 217868 - 217852 - T 71 -7.3 -3.91716 | opp_overlap 217851 217854 CTAGGTTGGAAATAA GACTTGC GAA ACAAGTC ACTTTCGTAGAGTAC TERM 308 217968 - 217937 - T 90 -11.1 -4.35644 | opp_overlap 217941 217944, overlap 217941 ATGACTATAAAAGAA GAAACAACTATCT CCCCCC AGATAGCTGTTTC GTGCGCAAATTACAG TERM 309 217964 - 217941 - T 78 -6.1 -4.72617 | opp_overlap 217941 217944, overlap 217937 CTATAAAAGAAGAAA CAACTATCT CCCCCC AGATAGCTG TTTCGTGCGCAAATT SSU05_0230 219746 - 218121 - | glycosidase SSU05_0231 221821 - 219827 - | phosphotransferase system IIC component, glucose/maltose/N-acetylglucosamine-specific TERM 310 221899 - 221920 + H 100 -8.9 -4.76193 | opp_overlap 221903, overlap 221903 AGCATGTCCTTTTTT GAAATTTGT ACGG ACAAATTTC TTTTGTGTTATCATT TERM 311 221903 - 221916 + H 72 -3.9 -4.89519 | opp_overlap 221903, overlap 221899 TGTCCTTTTTTGAAA TTTGT ACGG ACAAA TTTCTTTTGTGTTAT TERM 312 222117 - 222100 - g 74 -6.3 -4.53077 | TTAAAAGAAAAAATA CGGACAA ATGT TTATCCG GCAGAAAGCTCCCTA SSU05_0232 222052 - 222768 + | transcriptional regulator SSU05_0233 222826 - 223137 + | hypothetical protein SSU05_0234 223134 - 223682 + | hypothetical protein TERM 313 223677 - 223696 + F 100 -8.6 -4.95806 | opp_overlap 223677 TTGAGTAATATAGCA GGGTAAGG GAGG CCTTATCC TTTTTATCGTCATTT SSU05_0235 223833 - 226169 + | mismatch repair ATPase SSU05_0236 226193 - 226846 + | acetyltransferase TERM 314 226867 - 226833 - f 93 -13.2 -3.05463 | opp_overlap 226842 226863, overlap 226842 ATGTGGTGGATTTAA CAGAAAAAAGTTGAAA CAT TTTCAACTTTTTTCTT TTTGTAAATGAATCT TERM 315 226842 - 226858 + F 100 -8.1 -5.98675 | opp_overlap 226833 226842 ATTTAACAGAAAAAA GTTGAAA CAT TTTCAAC TTTTTTCTTTTTGTA TERM 316 226858 - 226842 - f 100 -8.1 -5.48063 | opp_overlap 226842, overlap 226833 ATTTAACAGAAAAAA GTTGAAA CAT TTTCAAC TTTTTTCTTTTTGTA SSU05_0237 227053 - 227367 + | Thiol-disulfide isomerase and thioredoxin TERM 317 227380 - 227403 + F 100 -7.5 -5.67063 | opp_overlap 227380 TAATTGAAAATGAAA GCAAGTGGT GGATCG ACTACTTGC TTTTTTTATAATCAG SSU05_0238 227557 - 227784 + | hypothetical protein TERM 318 228117 - 228103 - gf 71 -5 -4.63218 | opp_overlap 228103 TGCTTTTGAAGAAAA TCTCCT GCC AGAAGA TGTCATTCAATACAT SSU05_0239 227756 - 229165 + | Acyl-coenzyme A synthetases/AMP-(fatty) acid ligase TERM 319 229189 - 229159 - f 95 -5.4 -6.01187 | AATGAAAGAAAAAAA TCTGTAAGAGTGAC GAA ACCACGCTTGCAGA TAAGAAGGAGTTCAC TERM 320 229652 - 229642 - g 71 -2.4 -5.08601 | TTATTTGAAGAAAAA TCCC CAA GGGT ACTGCCATATCGATC TERM 321 230109 - 230122 + G 70 -3.8 -4.83759 | opp_overlap 230109 AGGAAATGGAAGAAG CAGG ATATGG CCTG TTTTTGGATTTGCTT SSU05_0240 229205 - 230143 + | peptide methionine sulfoxide reductase TERM 322 230153 - 230189 + F 84 -11.8 -3.12005 | opp_overlap 230153 230161, overlap 230161 AAATAAATTTATGAA CGCAGAAAGTCTATTC GCAAA GAATAGGCTTTTTGTG TATTAAAATTGTATG TERM 323 230161 - 230181 + F 83 -6.2 -5.10064 | opp_overlap 230161 230153, overlap 230153 TTATGAACGCAGAAA GTCTATTC GCAAA GAATAGGC TTTTTGTGTATTAAA TERM 324 230406 - 230390 - g 73 -5.1 -4.62336 | overlap 230391 AGTCGAGTTGAAAAA TTAGGAG TTG CTCCTAC ATCGGATATATTATT SSU05_0241 230261 - 230548 + | transcriptional regulator PlcR, putative SSU05_0242 230640 - 231140 + | transcriptional regulator PlcR, putative TERM 325 231279 - 231300 + F 100 -11.6 -4.84359 | opp_overlap 231278 GGGTTCTAATGATAG GGAGGTGG TGGAGT CCACCTCC TTTTTGTGCAAATGG SSU05_0243 231306 - 231779 + | hypothetical protein SSU05_0244 231829 - 231921 + | hypothetical protein TERM 326 232141 - 232156 + GF 78 -5.4 -4.98616 | opp_overlap 232138, overlap 232143 232153 CTAATTAAGGGAGCT TTGCCT CTCA AGGCGA TTTTTGCTATTTTAC SSU05_0245 231994 - 233310 + | hypothetical protein SSU05_0246 233241 - 233333 + | hypothetical protein SSU05_0247 233533 - 235314 + | hypothetical protein SSU05_0248 235316 - 235948 + | peptide ABC transporter ATPase TERM 327 236301 - 236321 + F 100 -10.5 -5.61881 | TTCACGTTGATTCTA GAGGTTGAA GTG TTCAGCCTC TTTTTGTTTTTCCGG SSU05_0249 236372 - 237706 + | Na+/alanine symporter TERM 328 237714 - 237731 + F 100 -6.9 -5.4593 | opp_overlap 237709 237714 237716, overlap 237716 AGAAATAAGATAAAA GTCAGCC ACTT GGCTGTC TTTTTGTTCTTTTAG TERM 329 237731 - 237714 - f 83 -6.9 -4.86029 | opp_overlap 237714 237716, overlap 237709 237716 AGAAATAAGATAAAA GTCAGCC ACTT GGCTGTC TTTTTGTTCTTTTAG TERM 330 237716 - 237729 + F 81 -8.1 -4.32946 | opp_overlap 237716 237714 237709, overlap 237714 AAATAAGATAAAAGT CAGCC ACTT GGCTG TCTTTTTGTTCTTTT SSU05_0250 237771 - 238619 + | small-conductance mechanosensitive channel SSU05_0251 238630 - 239217 + | ATPase TERM 331 239419 - 239386 - T 80 -6.8 -4.8622 | opp_overlap 239386 239387 239388, overlap 239388 TCTTTTAATGAAAAA TACCCCCAAAATTA GCACGT CAATTTTGGGGGCG TTTTTATTATAGTTT TERM 332 239386 - 239419 + T 89 -6.1 -5.25772 | opp_overlap 239386 239388, overlap 239387 239388 TCTTTTAATGAAAAA TACCCCCAAAATT AGCACGTC AATTTTGGGGGCG TTTTTATTATAGTTT TERM 333 239388 - 239417 + T 79 -10.9 -2.82187 | opp_overlap 239388 239386, overlap 239387 239386 TTTTAATGAAAAATA CCCCCAAAATT AGCACGTC AATTTTGGGGG CGTTTTTATTATAGT TERM 334 239417 - 239388 - T 91 -11.6 -4.05402 | opp_overlap 239387 239386 239388, overlap 239386 TTTTAATGAAAAATA CCCCCAAAATTA GCACGT CAATTTTGGGGG CGTTTTTATTATAGT SSU05_0252 240799 - 239453 - | glutamate dehydrogenase TERM 335 240827 - 240847 + H 79 -8.5 -4.11235 | opp_overlap 240832, overlap 240832 TTTCTTTTTTATTTA TTAAATTGT CTG ACAATTTAA TTTATCTGATAATTA SSU05_0253 241000 - 241959 + | dihydroorotate dehydrogenase 1A SSU05_0254 242292 - 243524 + | hypothetical protein SSU05_0255 243518 - 244363 + | HAD superfamily hydrolase TERM 336 244407 - 244378 - T 77 -2.8 -5.43414 | opp_overlap 244378 244376 AGTATATAGAAAAAA GCTAGTGCTCTC AATCCA GAGAATGCTAGC TCTTTTAATTTCCAA SSU05_0256 245248 - 244412 - | ABC-type uncharacterized transport system, permease component SSU05_0257 246014 - 245196 - | ABC-type uncharacterized transport system, permease component TERM 337 245535 - 245523 - GR 76 -7.7 -4.07975 | TAATTGAACGATAAA CATCC CTA GGATG GAGCTGACTAGAAAG SSU05_0258 246753 - 245968 - | ABC-type uncharacterized transport system, ATPase component TERM 338 246153 - 246177 + gr 100 -8.7 -4.96848 | TAAATTCCCAGCCCT CCAATTGCAAA TCT TTTTCAATTGG TTTTTCTGTGGAGAA SSU05_0259 246953 - 246774 - | hypothetical protein SSU05_0260 247572 - 247039 - | transcriptional regulator TERM 339 247613 - 247591 - H 79 -10.8 -3.01712 | opp_overlap 247589 247586 TTCTCCTTTTGAACA TTTTTAGACA CAG TGTCTAAAAA CAGTTCTTCTGACTT SSU05_0261 247653 - 250157 + | hypothetical protein TERM 340 250195 - 250161 - T 89 -10.9 -4.04071 | opp_overlap 250166, overlap 250166 AAAGATGAATAAGAA TAAAACCAACTGCTC CATGT GAACAGTTGGTTTTT GGTTGATGTGGTTAT TERM 341 250166 - 250190 + T 100 -8.6 -4.91873 | opp_overlap 250161 250166 TGAATAAGAATAAAA CCAACTGCTC CATGT GAACAGTTGG TTTTTGGTTGATGTG TERM 342 250190 - 250166 - T 100 -10.8 -5.00467 | opp_overlap 250166, overlap 250161 TGAATAAGAATAAAA CCAACTGCTC CATGT GAACAGTTGG TTTTTGGTTGATGTG SSU05_0262 251265 - 250207 - | hypothetical protein TERM 343 250423 - 250449 + g 78 -2.2 -5.56673 | overlap 250424 ATCATTCCCATCTTC ATAGTAGTAACC TTG GGCTTCTACTAA TTTTTTCTTGTCGAT SSU05_0263 252017 - 251262 - | hypothetical protein SSU05_0264 252399 - 252004 - | transcriptional regulator SSU05_0265 252639 - 253019 + | putative effector of murein hydrolase LrgA SSU05_0266 252994 - 253269 + | putative effector of murein hydrolase SSU05_0267 253269 - 253706 + | putative effector of murein hydrolase TERM 344 253734 - 253711 - Tf 100 -11.8 -5.55769 | opp_overlap 253711 TCTTACAATAAAAAA CTACGATTGG AATT CCAACCGTAG TTTTTTAGTCTACAT TERM 345 253711 - 253734 + TF 100 -9.6 -5.22312 | opp_overlap 253711 TCTTACAATAAAAAA CTACGATTGG AATT CCAACCGTAG TTTTTTAGTCTACAT SSU05_0269 254653 - 253739 - | formate/nitrate transporter TERM 346 254661 - 254649 - Gg 95 -4.9 -5.75342 | GTTGTCCAAAAAAAA TTCAA CTT TTGAA AGGAAATATAAGAAA TERM 347 255256 - 255236 - gH 74 -6.1 -4.4648 | AGGGCTATGATAAAA CAGTCGCTG AGA CAATGACTG CTCCATATACTTCAG SSU05_0268 254596 - 255525 + | hypothetical protein TERM 348 255535 - 255548 + FH 88 -5.2 -5.71295 | opp_overlap 255535 CTATAATATAGAGAA CCCG TTTCGT CGGG TTTTTCTTTTTCTCT TERM 349 257067 - 257056 - g 75 -2.2 -5.28826 | AAACTGCACAAAAAA CTAG TCAG CCAG CCAGTCGCAAAACAG SSU05_0270 255654 - 257186 + | hypothetical protein TERM 350 257196 - 257215 + F 100 -8.6 -5.36441 | opp_overlap 257196 AAATAAACGACTAGA CTGGGAAG GAAA CTTCTCAG TTTTTTATCTAGACA SSU05_0271 257298 - 257906 + | NTP pyrophosphohydrolase including oxidative damage repair enzyme TERM 351 257894 - 257918 + F 81 -7.3 -4.56597 | opp_overlap 257894 257898 GGAAATAGTGAAAAG TAATCTATCGT GAA ATGATAGGTTA TTTTTGGGAGGAAAA TERM 352 258729 - 258746 + G 70 -3.5 -4.89477 | ATGGTCTTTTAATGT TAAACAT GGGG GTGTTTA TTTTATTCTTCCAAA SSU05_0272 258154 - 260250 + | translation initiation factor 2 GTPase TERM 353 260292 - 260343 + F 77 -9.7 -3.24423 | gap 1, opp_overlap 260299, overlap 260299 TCCCTCTTCTAAGTT CATAAAAGACTCCAGATCATCGCT GTAGA AGCCTTGGTTTGGAGTCTTTT-TG TTAAATATTCTTAGA TERM 354 260299 - 260337 + F 100 -8.9 -5.12971 | opp_overlap 260299, overlap 260292 TCTAAGTTCATAAAA GACTCCAGATCATCGCT GTAGA AGCCTTGGTTTGGAGTC TTTTTGTTAAATATT TERM 355 260847 - 260836 - g 70 -5.8 -4.26881 | overlap 260831 GCTCAGAAAATCAAA CTGC GACC GCAG TCGATGGAATTTCAC TERM 356 260932 - 260922 - g 81 -5.4 -5.18726 | GCTCCAGAAGAAAAA CTAG TTT CTAG CGATTCTACGAGAGA TERM 357 261150 - 261139 - g 79 -3 -5.38047 | overlap 261141 TATCTATAGAAAAAA TATC GGCA GATA ATGACGAAATTAAGT SSU05_0273 260685 - 261404 + | methyl-accepting chemotaxis protein SSU05_0274 261534 - 262724 + | methyl-accepting chemotaxis protein TERM 358 262829 - 262869 + F 100 -12.1 -4.78237 | opp_overlap 262822 TCCAAAATCTGAACT GCACCCCAAAAGTTAGA GGTGAAA TCTAATTTTTGAGGTGC TTTTCTTGTAAGGTC SSU05_0275 262967 - 263101 + | hypothetical protein TERM 359 263179 - 263154 - T 100 -6.9 -5.95449 | opp_overlap 263154 AAACAAAAGAAAAAA GCCTTTGAAAC GTTG ATTTCATAGGC TTTCTGTATGTTGTC rpmG 263344 - 263195 - | 50S ribosomal protein L33 rpmF 263542 - 263360 - | 50S ribosomal protein L32 TERM 360 263640 - 263665 + H 85 -4.1 -5.63857 | opp_overlap 263631 263648, overlap 263642 GTATAACAAAAGTTT TTTGTAAAGTA AAGT TACTTGACAGA TTTTTTTCACTTTTT TERM 361 264798 - 264775 - g 75 -8.9 -3.66908 | opp_overlap 264772, overlap 264771 GTCCTTGAAAAGCAA GGCATCGAG CTCCCT CTCGATACC CAGTTAGATGTTTAC hisS 263818 - 265101 + | histidyl-tRNA synthetase TERM 362 265092 - 265115 + T 84 -4.6 -5.45802 | TTTAGAAGAATTGGA GAAGCAGT AGTCTAAA GCTGCTTC TTTTTATTTTAGAAA TERM 363 265160 - 265139 - T 100 -8.1 -5.42514 | TTAGAAAGCAAAAAA GAAGCGATT GGAT AATCACTTC TTGAAAATAGTGGAG SSU05_0279 266207 - 265182 - | alcohol dehydrogenase TERM 364 266558 - 266572 + H 100 -2.8 -6.3578 | opp_overlap 266558 CAAACCGGAAAAATT TGGAAA AAT TTACCA TTTTTTTTTTCCAAT SSU05_0280 266741 - 269311 + | bifunctional acetaldehyde-CoA/alcohol dehydrogenase TERM 365 269485 - 269509 + F 91 -11.5 -3.93583 | opp_overlap 269481 GAGTAGTAAATCGTA TCCTACTCAGT TGA ACGGAGTAGGA TTTATAGGTAAATTG TERM 366 269543 - 269570 + F 100 -12.2 -4.42806 | opp_overlap 269543 269546 CCAAATATCGTAAGA CAATCCTCTATT GAAA AATAGGGGATTG TTTGTTTAGAAATAA TERM 367 269570 - 269543 - f 76 -10 -3.11218 | opp_overlap 269543, overlap 269546 CCAAATATCGTAAGA CAATCCTCTATT GAAA AATAGGGGATTG TTTGTTTAGAAATAA TERM 368 270787 - 270755 - g 79 -6.9 -4.58663 | ATGACGCTGCAAAAA CAGCTGAGCTGATGG AAG CCTTGAACACAGCTG GTCAGTATGACATTC SSU05_0281 269713 - 271209 + | threonine synthase TERM 369 271228 - 271252 + F 100 -10.1 -5.3658 | opp_overlap 271232 CGATTTATTTTATGA CAAACTGCTCA TTT TGAACAGTTTG TTTTCTTTTTGTGGT TERM 370 271248 - 271232 - f 71 -7.3 -3.9712 | opp_overlap 271228 TTATTTTATGACAAA CTGCTCA TTT TGAACAG TTTGTTTTCTTTTTG TERM 371 271406 - 271380 - gf 85 -2.2 -5.8901 | overlap 271382 AGAGAAAAGAAAAAA GCCCTCTTGAAG CGG CTCAAAGAACGC ATCAAACCCAAGATG SSU05_0282 271298 - 271498 + | hypothetical protein TERM 372 272288 - 272298 + GF 71 -2.4 -5.09521 | opp_overlap 272281, overlap 272281 GATGAATACCAAGAT GGCG GAT CGCA TTTTTGGTTTCTTGG SSU05_0283 271467 - 273098 + | ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease component SSU05_0284 273016 - 274752 + | ABC-type multidrug transport system, ATPase and permease component SSU05_0285 274753 - 275346 + | hypothetical protein TERM 373 275805 - 275819 + GF 85 -5.7 -5.1963 | opp_overlap 275805 GTGGTTTGTAAGCCA CTCCA GTACA TGGAG TTTTTCTTGGTTCCC SSU05_0286 275343 - 275984 + | ABC-type cobalt transport system, permease component CbiQ and related transporters TERM 374 276760 - 276771 + G 70 -5.8 -4.2704 | CGGGCAATAGCGGAG CTGG CAGA CCAG TTTGTTAATGATAAA TERM 375 276923 - 276911 - g 70 -5.5 -4.56775 | opp_overlap 276911 ATGGTTCTGGAAAAA CAAGC CTT GCTCG TTATCTGGTCGGTTT SSU05_0287 275959 - 277392 + | ABC-type cobalt transport system, ATPase component TERM 376 277555 - 277569 + G 95 -7.8 -5.08601 | CTAATAATATTTTAG CCGTCT ATC AGGCGG TTTTTATTGCCCTAG TERM 377 277794 - 277807 + G 73 -3.8 -5.03715 | TATTTGATATTGGTT GGTG GGGGAG CACC TTTTTTGGGACTCAT SSU05_0288 277392 - 278675 + | Na+-driven multidrug efflux pump TERM 378 278776 - 278805 + F 80 -11.5 -2.57621 | opp_overlap 278769 278781 278784, overlap 278785 TCATATAATCTCCTA GAGAACAGTCGGC CGCG GTCGGCTGTTTTC GTGTGTTCTATTCTT TERM 379 278785 - 278800 + F 86 -8.2 -4.44819 | opp_overlap 278781 278784, overlap 278776 CTCCTAGAGAACAGT CGGCCG CGGT CGGCTG TTTTCGTGTGTTCTA TERM 380 279286 - 279274 - g 71 -3.4 -5.00884 | AGTCTTCGGAAAAAA TTGC TCACG GCAA TCCCTCGGGTATTGA SSU05_0289 278847 - 279800 + | mevalonate kinase TERM 381 280016 - 280000 - gf 100 -6.7 -5.69262 | opp_overlap 280000 TTACAAAAAGAAAAA GAAATTT TAA AAATTTC TCGATTTTTGGATTT SSU05_0290 279793 - 280818 + | mevalonate pyrophosphate decarboxylase SSU05_0291 280760 - 281899 + | mevalonate kinase SSU05_0292 281910 - 283007 + | isopentenyl pyrophosphate isomerase TERM 382 283082 - 283059 - T 100 -6 -5.98675 | gap 1, opp_overlap 283059 TAGAAAAATAAAAAA GCC-AGGTCCA TTT TGGAACTTGGC TTTTGTCATGGAGTG TERM 383 283059 - 283082 + T 86 -8.2 -4.46926 | gap 1, opp_overlap 283059 TAGAAAAATAAAAAA GCCAGG-TCCA TTT TGGAACTTGGC TTTTGTCATGGAGTG SSU05_0293 284853 - 283102 - | ABC-type multidrug transport system, ATPase and permease component SSU05_0294 286633 - 284840 - | hypothetical protein TERM 384 284933 - 284943 + g 75 -5.4 -4.74706 | TTCTTGGTGACGACC TCGT TCT ACGA TTTTTCCATCTTCAA TERM 385 286632 - 286608 - G 71 -4.2 -4.87892 | opp_overlap 286589, overlap 286609 TCTGAACAAAAGAAA GGTTGGTAGC TTGTC GCAACCAACA AATAATAGAATTCGG TERM 386 286763 - 286786 + H 100 -9 -5.1104 | opp_overlap 286763 AACACGTACGATACA GGTAGAAATC AAAA GATTTTTACC TTTTTCTGTCTATTT SSU05_0295 286839 - 287105 + | hypothetical protein TERM 387 287509 - 287489 - g 71 -4.7 -4.73388 | opp_overlap 287489, overlap 287491 AAGGGCTACCAAAAA GGTGATGAA ATC CTCATCAAC TCTATTCCGCAGGCA SSU05_0296 287117 - 288454 + | hypothetical protein TERM 388 288465 - 288485 + F 100 -9 -5.58179 | opp_overlap 288463 ACTAAAAAACGTAGA CCGATTGC CACAA GCAGTCGG TTTTTTGTTATACTA SSU05_0297 288530 - 289225 + | putative phosphoglycerate mutase TERM 389 289235 - 289252 + F 100 -6.3 -6.09888 | opp_overlap 289235 289226 AAATAAGATATAAAA TCAGGGA GGAT TCTCTGA TTTTTTTTCTTGACA TERM 390 289297 - 289323 + F 100 -9.6 -5.63645 | TCCTCAGACTGATTT TTAGCACTCT AAGCAAA AGAGTGCTAA TTTTTTGTCTTTTGA TERM 391 289409 - 289383 - f 84 -11 -3.47322 | opp_overlap 289379, overlap 289401 TGGGAGTATAAGTAA TTAGCACTCGAT ATC ATAGAGTGCTAA CGCTCTTCAAAAATC hrcA 289523 - 290578 + | heat-inducible transcription repressor TERM 392 290919 - 290907 - g 76 -7.7 -4.17132 | AAATGGTTCAAGAAA GCTTG ATT CAAGC CCTTAAAGAAGAAGG SSU05_0299 290591 - 291103 + | molecular chaperone GrpE (heat shock protein) SSU05_0300 291200 - 293023 + | molecular chaperone DnaK TERM 393 293226 - 293248 + F 91 -9.9 -4.67353 | opp_overlap 293226 293218 293228 TAAAGATTCCAATCA CAGAGGTTG CAACC CAGCCTCTG TTTTTGGGTAAATAC SSU05_0301 293370 - 293468 + | hypothetical protein SSU05_0302 293443 - 294591 + | DnaJ-like molecular chaperone TERM 394 294621 - 294605 - f 73 -9.4 -2.92293 | overlap 294600 AATTCTAAGATGAGA CTGGGC AAAAA GCCCAG GACCACTACTCAGAG SSU05_0303 294867 - 295694 + | lipoate-protein ligase A SSU05_0304 295704 - 297152 + | amidase TERM 395 297261 - 297246 - g 100 -9 -5.54079 | opp_overlap 297258, overlap 297251 CGAAAAAGTAAAAAA GGAAGC TATG GCTTCC AAAGGAGATTGTTTT TERM 396 297416 - 297395 - g 75 -3.1 -5.09426 | CTCAATGGGAAAAAA TTCAAGA AGCTGGTG TCTTGAA AGTTGCTACACCAGG SSU05_0305 297199 - 298152 + | amino acid ABC transporter periplasmic protein TERM 397 298177 - 298220 + F 95 -11.2 -4.56597 | gap 1, opp_overlap 298187, overlap 298179 298181 298183 ACAAATTAAATGCAT CTTGTATAGACTTTGTCAGTC ACA GACTGGCAAGGTCTAT-CTGG TTTTTAGGAAAGAGG TERM 398 298179 - 298219 + F 82 -11.3 -3.33744 | opp_overlap 298187, overlap 298177 298181 298183 AAATTAAATGCATCT TGTATAGACTTTGTCAGTC ACA GACTGGCAAGGTCTATCTG GTTTTTAGGAAAGAG TERM 399 298181 - 298217 + F 100 -13.9 -3.23708 | opp_overlap 298187, overlap 298179 298177 298183 ATTAAATGCATCTTG TATAGACTTTGTCAGTC ACA GACTGGCAAGGTCTATC TGGTTTTTAGGAAAG TERM 400 298183 - 298215 + F 100 -16.5 -3.18031 | opp_overlap 298187, overlap 298181 298179 298177 TAAATGCATCTTGTA TAGACTTTGTCAGTC ACA GACTGGCAAGGTCTA TCTGGTTTTTAGGAA SSU05_0306 298243 - 298914 + | ABC-type amino acid transport system, permease component SSU05_0307 299277 - 299038 - | transcriptional regulator SSU05_0308 299773 - 299249 - | hypothetical protein TERM 401 299790 - 299837 + r 100 -12.6 -4.62069 | opp_overlap 299821, overlap 299788 GCAAACCTCCGATTA TTATTGTTTTATGATAATATTA TCTG TAAAATTATTATAAAACAATAA TTTTTGAAATGCAAG TERM 402 299883 - 299900 + r 72 -8.4 -3.62518 | opp_overlap 299883 AGAATAATAAGAAAA CCGCCA ACTACC TGGCGG TTTGAAGCTATTTAA TERM 403 299900 - 299883 - R 100 -9.1 -5.01823 | opp_overlap 299883 AGAATAATAAGAAAA CCGCCAA CTAC CTGGCGG TTTGAAGCTATTTAA SSU05_0309 301722 - 299908 - | cation transport ATPase TERM 404 300372 - 300386 + g 73 -5.6 -4.44046 | opp_overlap 300372, overlap 300374 CACCCGTCAAGAGAA TTGGCG TCA CGCCCA TTTCTTTCAACTGGG TERM 405 301922 - 301908 - R 100 -4.9 -6.23545 | opp_overlap 301908 GGGAAATAAAAAAAA GCGAC AGAAA GCCGC TTGGATATTCGTCTT SSU05_0310 302393 - 301938 - | Fe2+/Zn2+ uptake regulation protein TERM 406 302776 - 302790 + G 70 -7.8 -3.61178 | GCTGGCAGTCGAGAT GTGGAG AAG CTCCGC TTTGCCCTGGATACC truA 302560 - 303309 + | tRNA pseudouridine synthase A SSU05_0312 303299 - 304060 + | phosphomethylpyrimidine kinase SSU05_0313 304008 - 304535 + | hypothetical protein TERM 407 304606 - 304591 - g 71 -4.7 -4.60041 | opp_overlap 304591 AGCGATCTTCAAAAA GGACA GATATT TGTCC TTGGATTGTCCTCTA TERM 408 304665 - 304653 - g 77 -6.3 -4.61231 | opp_overlap 304652 304653 GCATATCGGGAAAAA TTCCA GTC TGGAA GTTGGTGAGGTGGTT SSU05_0314 304516 - 305082 + | hypothetical protein SSU05_0316 305561 - 305448 - | hypothetical protein SSU05_0315 305082 - 305696 + | hypothetical protein TERM 409 305850 - 305876 + FH 88 -3.1 -5.9362 | ATTGAGTATCAGGAA GTAACTTTC GACTAGTAA GAGAGTTAC TTTTTTTATCTTTTG SSU05_0317 305969 - 306733 + | hypothetical protein TERM 410 306823 - 306842 + F 91 -13.6 -2.53581 | AGGTGCAGGTTGCTA GCACAGCC TAGT GGCTGTGC TAGGTTGGAGATATA SSU05_0318 306987 - 307445 + | transcriptional regulator TERM 411 307441 - 307456 + F 82 -7.6 -4.4009 | opp_overlap 307436 CACAAGTAACCCGAA TCTGAC CTCG GTCAGA TTTTATAAACTCAAA SSU05_0319 307525 - 308526 + | NADPH:quinone reductase and related Zn-dependent oxidoreductase TERM 412 308999 - 308979 - g 79 -6.8 -4.67234 | opp_overlap 308978 AGGTAACTGGAAAAA CCTTCCGC TATAT GCTGAAGG CTGGTTTAGAGCGTG SSU05_0320 308552 - 309397 + | alpha/beta superfamily hydrolase/acyltransferase SSU05_0321 309390 - 310259 + | dehydrogenase TERM 413 311021 - 311044 + GF 70 -3.8 -4.77438 | ACCTGATTGAAATTT CAGGTGGC AATTATGA GACACCTG TTTTTGGTAGTGACT SSU05_0322 310216 - 311427 + | NADH:flavin oxidoreductase SSU05_0323 311437 - 311886 + | hypothetical protein TERM 414 312106 - 312073 - T 76 -4.7 -5.05601 | gap 1, opp_overlap 312073 CACTATACACAAAAA GACTTAGAGTGACTGA ACA TCAGTTG-TCTAAGTC TTTTTGCTTGGTTTG TERM 415 312073 - 312106 + T 100 -9.1 -4.95957 | gap 1, opp_overlap 312073 CACTATACACAAAAA GACTTAGAGTGACTGA ACA TCAGTTG-TCTAAGTC TTTTTGCTTGGTTTG SSU05_0324 312727 - 312146 - | transcriptional regulator SSU05_0325 312754 - 313719 + | lipase TERM 416 313971 - 313957 - g 71 -8.6 -3.5511 | opp_overlap 313959, overlap 313955 GTTTATGTACAAAGA GAGTTC ACC GAACTC TTACAGTCCTCTTTA SSU05_0326 313826 - 314845 + | hypothetical protein SSU05_0327 315042 - 314929 - | hypothetical protein TERM 417 315111 - 315095 - g 75 -5.1 -4.78077 | TTGAAGCAAAAGAAA CAAATCG CGG CGTTTTG ACTTTCACAATCGGT tig 315067 - 316350 + | trigger factor TERM 418 316363 - 316378 + F 93 -6.8 -5.68438 | opp_overlap 316363 TAATTATTTGGAAAA CTCGAC TCTG GTCGGG TTTTTTGTTTAATCA SSU05_0329 316383 - 316748 + | hypothetical protein TERM 419 317292 - 317324 + TF 81 -4.2 -5.41143 | ATTCGTTTAAGTAAA GGTAAGACTGGCTT ATAAA AAGAAAGTCTTATC TTTTTTTAAAAAATA TERM 420 317713 - 317741 + GT 72 -8.3 -3.57144 | AATTTGCAAGGTTCA TTTGTCAAGGTTT TGG AGGCTTTGACAAA TTTACCGCTGACAAA SSU05_0331 318008 - 317916 - | hypothetical protein SSU05_0330 317395 - 318315 + | ABC-type metal ion transport system, periplasmic component/surface adhesin TERM 421 318335 - 318318 - fH 79 -4.8 -5.11836 | AGAGTTAAAATAAAA GGCCGA ATTCTA TCGACC GAAAGGAGAAAAAAT SSU05_0332 318349 - 321228 + | hypothetical protein SSU05_0333 321342 - 321506 + | hypothetical protein TERM 422 321551 - 321506 - f 74 -9.3 -3.07232 | gap 1, opp_overlap 321516, overlap 321511 321516 AGAAGAACAAGTATA GTAAACAAAATACCTGTAGCAC TGA GCTCTGCAGGTATTTT-TTTAC AGAAAAACGATAAAG TERM 423 321542 - 321516 - f 80 -5.8 -4.97158 | opp_overlap 321516, overlap 321511 321506 GTATAGTAAACAAAA TACCTGTAGCAC TGA GCTCTGCAGGTA TTTTTTTACAGAAAA TERM 424 321516 - 321542 + F 89 -5.8 -5.40072 | opp_overlap 321516 321511 321506 GTATAGTAAACAAAA TACCTGTAGCAC TGA GCTCTGCAGGTA TTTTTTTACAGAAAA SSU05_0334 321633 - 322214 + | DNA-directed RNA polymerase subunit delta TERM 425 322302 - 322325 + G 100 -9.6 -5.84011 | overlap 322304 CCTCTTTTGAGGTCG GAGCTCCCTA GCGA TAGGGAGCTA TTTTTGTTTTTTCTT TERM 426 322304 - 322323 + G 100 -12.2 -4.48934 | overlap 322302 TCTTTTGAGGTCGGA GCTCCCTA GCGA TAGGGAGC TATTTTTGTTTTTTC SSU05_0335 322293 - 324011 + | CTP synthetase TERM 427 324029 - 324052 + F 73 -6.1 -4.36366 | opp_overlap 324029 324048, overlap 324022 ATAACCATTATAGAA GAAGATTGG TATCAT TCAATCTTC TTTATATATTTTATA TERM 428 324382 - 324401 + F 100 -12.2 -4.65153 | CACTCTCCGCATAGT GGACTAGC TAAG GCTAGTCC TTTTGCTTTGTCTAG SSU05_0336 324612 - 325064 + | fructose/tagatose bisphosphate aldolase SSU05_0337 325072 - 325182 + | fructose-bisphosphate aldolase class-II TERM 429 325191 - 325168 - f 73 -9.6 -2.86492 | opp_overlap 325153 325167, overlap 325167 CCATACCCAGCAAAC TGGGCAAGGT CTTG ACCTTGACCA CTTGCGTAAATTGAC SSU05_0338 325236 - 325352 + | fructose-bisphosphate aldolase SSU05_0339 325333 - 325500 + | fructose/tagatose bisphosphate aldolase TERM 430 325586 - 325567 - f 76 -5 -5.02715 | opp_overlap 325567 AGATTAAACCAAAAA GGATTTTC TTTC GAGAATCC TTTTTATTATAATAG TERM 431 325567 - 325586 + F 90 -7.2 -5.22006 | opp_overlap 325567 AGATTAAACCAAAAA GGATTTTC TTTC GAGAATCC TTTTTATTATAATAG rpmB 325893 - 326081 + | 50S ribosomal protein L28 TERM 432 326110 - 326089 - f 79 -7.3 -4.51812 | opp_overlap 326089 GTGTATAATAACAAA GTCGTTAGA AAAA TCTAGCGAC TTTTGTTTTTGGAAA TERM 433 326089 - 326110 + F 100 -9.5 -5.26119 | opp_overlap 326089 GTGTATAATAACAAA GTCGTTAGA AAAA TCTAGCGAC TTTTGTTTTTGGAAA TERM 434 326565 - 326544 - f 71 -8.7 -3.25317 | overlap 326542 326540 TGATAAACTAAGATA GTTGTCGCG AGAG CGCGATAAC GACAAGACCTTTGAA TERM 435 327710 - 327723 + F 73 -6.7 -4.1891 | ACATCCCGATGACCG CCCTA GAGA TAGGG TTTCTCTTCGGAGCA TERM 436 328910 - 328931 + F 74 -10.1 -2.58544 | opp_overlap 328911, overlap 328909 ACGGCAGGAGGGCAA ACCGAGGAG TTTA CTCCTCGGG GTTGTAGGACTGCAA TERM 437 328930 - 328911 - f 100 -13.6 -3.62096 | opp_overlap 328910 328909 CGGCAGGAGGGCAAA CCGAGGAG TTTA CTCCTCGG GGTTGTAGGACTGCA TERM 438 328987 - 328972 - f 74 -7.6 -3.92604 | AAGAGTATAGAAGAA CTACCT GGGA AGGTAG GCCAAAGAGAGTAAT TERM 439 329010 - 329020 + F 74 -2.6 -5.28176 | AGAGTAATAGCCTCG TATT TAA AATA TTTTTTATACCTAGC TERM 440 331710 - 331722 + F 78 -10.5 -3.09327 | ACGCCTGAAGTAGTT GGGGG TTG CCCCC TGTTAGATACGGTAG TERM 441 331924 - 331940 + F 100 -6.6 -6.47325 | TACGGACTATATTTG GAGACT GCTTA AGTCTC TTTTTTTTGTTTTTT TERM 442 332587 - 332600 + G 75 -5.9 -4.63184 | opp_overlap 332587 332588, overlap 332588 CTATCGGTTAATGAA TCGCC GAGA GGCGG TTTTTGCGATGCATT SSU05_0342 332036 - 333664 + | RecG-like helicase SSU05_0343 333646 - 334053 + | RecG-like helicase TERM 443 334066 - 334087 + T 90 -10.9 -4.20712 | opp_overlap 334066 334068 TAGTCATATAAAAAA GGCCAACAC ACAT GTGTTGGTC TTTTGACATATTGTA TERM 444 334087 - 334066 - T 100 -8.7 -5.38047 | opp_overlap 334066, overlap 334068 TAGTCATATAAAAAA GGCCAACAC ACAT GTGTTGGTC TTTTGACATATTGTA TERM 445 334085 - 334068 - T 75 -9.9 -2.87962 | opp_overlap 334066, overlap 334066 GTCATATAAAAAAGG CCAACAC ACAT GTGTTGG TCTTTTGACATATTG SSU05_0344 334443 - 334117 - | L-asparaginase/ Glu-tRNAGln amidotransferase subunit D SSU05_0345 335075 - 334650 - | L-asparaginase/ Glu-tRNAGln amidotransferase subunit D TERM 446 335277 - 335287 + G 71 -2.4 -5.09259 | opp_overlap 335277, overlap 335272 GGTCTAGCTACAGGA CGTG ATC CTCG TTTTGTTTTGCAGTA SSU05_0346 335136 - 335990 + | HAD superfamily hydrolase TERM 447 336384 - 336395 + G 70 -5.8 -4.28361 | opp_overlap 336377 GAAAACATTTCCAGA TGGG AAGG CCCA TTTTGATCCAATTAC SSU05_0347 335980 - 336510 + | hypothetical protein SSU05_0348 336988 - 336560 - | universal stress protein UspA-like nucleotide-binding protein TERM 448 337955 - 337970 + G 76 -7.6 -4.18018 | ATGTTGTCCAATATG CGTTTG TGTT CAAACG TTTTGGCTCAACAGG SSU05_0349 337133 - 338347 + | aminotransferase AlaT TERM 449 338470 - 338484 + F 78 -8.6 -3.66356 | opp_overlap 338470 TCCGCACAGCTCAAA CTGTCT GGG AGACAG TTTGAGGTTGGAGAT TERM 450 338484 - 338470 - f 75 -8.6 -3.63627 | opp_overlap 338470 TCCGCACAGCTCAAA CTGTCT GGG AGACAG TTTGAGGTTGGAGAT TERM 451 338517 - 338503 - f 77 -10 -3.2614 | opp_overlap 338498 GAGGTTGGAGATGAA GCGAAC TCT GTTCGC ATCAGTCGTATAGGT TERM 452 338605 - 338638 + F 78 -6 -4.88407 | gap 1, opp_overlap 338609, overlap 338610 338612 338613 TGACACTAACTTTGA GAAGCGGTGCTGGGC TTTTT GCCCAGC-CTATTTC TTTTTGCTTGGATGA TERM 453 338610 - 338634 + F 70 -3.4 -4.96773 | opp_overlap 338609, overlap 338605 338612 338613 CTAACTTTGAGAAGC GGTGCTGGGC TTTTT GCCCAGCCTA TTTCTTTTTGCTTGG TERM 454 338612 - 338632 + F 79 -8.2 -4.08353 | opp_overlap 338609, overlap 338610 338605 338613 AACTTTGAGAAGCGG TGCTGGGC TTTTT GCCCAGCC TATTTCTTTTTGCTT TERM 455 338613 - 338631 + F 83 -11.7 -3.02572 | opp_overlap 338609, overlap 338612 338610 338605 ACTTTGAGAAGCGGT GCTGGGC TTTTT GCCCAGC CTATTTCTTTTTGCT SSU05_0350 338756 - 339544 + | transcriptional repressor CodY SSU05_0351 339578 - 340021 + | nicotinamidase-like amidase TERM 456 340100 - 340115 + F 90 -9 -4.57837 | ATTATAGTATAGTGA CCAGTC TGTG GACTGG TTTTTACAGGAATCT TERM 457 340358 - 340343 - g 71 -4 -4.82819 | GATAGGAGAATAAAA TGAATC CATT GATCCA AAGTTTGACAGAAGG rplS 340342 - 340689 + | 50S ribosomal protein L19 TERM 458 340724 - 340743 + F 100 -10 -5.40072 | TTGGTCGGAGAATGG GAGGCAGC GAAA GCTGTCTC TTTTTTTAAAAAAAA SSU05_0353 340844 - 341524 + | hypothetical protein TERM 459 341550 - 341581 + F 100 -8.2 -5.4588 | opp_overlap 341550 GATAGGCTAAGCAAA CAGTAAGTTTTATT GCTA GATGAAACTTGCTG TTTTTTATCGTTTTA gatC 341741 - 342043 + | aspartyl/glutamyl-tRNA amidotransferase subunit C gatA 342043 - 343509 + | aspartyl/glutamyl-tRNA amidotransferase subunit A gatB 343509 - 344948 + | aspartyl/glutamyl-tRNA amidotransferase subunit B TERM 460 344971 - 344957 - f 73 -7.2 -4.12188 | GGATTAGTTTTAAAA CTATAG AAA CTATAG AATACAAAAATCACT TERM 461 344982 - 344998 + F 84 -4.4 -5.4833 | opp_overlap 344982 344983, overlap 344983 TATAGAATACAAAAA TCACTC AAAAA GAGTGG TTTTTTGTTGACTAA SSU05_0357 345069 - 345464 + | deoxyguanosinetriphosphate triphosphohydrolase-related protein SSU05_0358 345433 - 346419 + | deoxyguanosinetriphosphate triphosphohydrolase-related protein TERM 462 346424 - 346475 + T 83 -9 -4.2558 | gap 1, opp_overlap 346437, overlap 346425 346436 346437 TACATAAATAGCCAT ATGTTTAAGAAAA-CCGAGAGTTCG TGT TGAATTCTCGGGTTTTCTTATGCAC TTTTAGTAAGAACTC TERM 463 346425 - 346474 + T 90 -12.5 -3.15027 | gap 1, opp_overlap 346437, overlap 346424 346436 346437 ACATAAATAGCCATA TGTTTAAGAAAA-CCGAGAGTTCG TGT TGAATTCTCGGGTTTTCTTATGCA CTTTTAGTAAGAACT TERM 464 346436 - 346462 + T 88 -8 -4.78839 | opp_overlap 346437, overlap 346425 346424 346437 CATATGTTTAAGAAA ACCGAGAGTTCG TGT TGAATTCTCGGG TTTTCTTATGCACTT TERM 465 346461 - 346437 - T 90 -8.6 -4.65078 | opp_overlap 346437 346436 346425 346424 ATATGTTTAAGAAAA CCGAGAGTTC GTGTT GAATTCTCGG GTTTTCTTATGCACT TERM 466 346437 - 346461 + T 85 -11.5 -3.46219 | opp_overlap 346437, overlap 346436 346425 346424 ATATGTTTAAGAAAA CCGAGAGTTCG TGT TGAATTCTCGG GTTTTCTTATGCACT SSU05_0359 347356 - 346478 - | transcriptional regulator SSU05_0360 347609 - 348781 + | galactokinase TERM 467 350235 - 350251 + G 83 -9.5 -4.02132 | opp_overlap 350223, overlap 350237 AAGGACAGGCAGCCT TTCTACG ATT CGTAGAA TTTGTAGGTTTAGCA SSU05_0361 348791 - 350272 + | galactose-1-phosphate uridylyltransferase TERM 468 350283 - 350303 + F 100 -9.7 -4.82667 | opp_overlap 350283 CATAAATGTAAGAAA GAGTGGGAC GGT GTCCTGCTC TTTTTGGTATAATGG TERM 469 350549 - 350578 + G 78 -9.5 -3.63895 | opp_overlap 350549, overlap 350536 TTGGCAGTTTTGAAA GATAAAAATGCCT TGCT AGGAATTTTTATC TTTGCCATGCTTGGC TERM 470 350578 - 350549 - g 76 -9.5 -3.55444 | opp_overlap 350536 350549 TTGGCAGTTTTGAAA GATAAAAATGCCT TGCT AGGAATTTTTATC TTTGCCATGCTTGGC SSU05_0362 350345 - 351256 + | DMT family permease TERM 471 351244 - 351263 + F 76 -2.2 -5.58179 | opp_overlap 351244, overlap 351238 ATTGGTTGCCCAAAA GAGTAT TGGTTAAT ATACTC TTTTTTGTTATACTA SSU05_0363 351289 - 351933 + | hypothetical protein TERM 472 352059 - 352089 + F 88 -4.7 -5.47159 | opp_overlap 352054, overlap 352060 352065 TTCATATAATCTCCA CGGAAGCAGTCGA CATGT TCGGCTGTTTTCA TTTTTGTTTGTTAAA TERM 473 352060 - 352088 + F 77 -8.2 -3.86668 | opp_overlap 352054, overlap 352059 352065 TCATATAATCTCCAC GGAAGCAGTCGA CATGT TCGGCTGTTTTC ATTTTTGTTTGTTAA TERM 474 352065 - 352083 + F 80 -6.7 -4.88326 | overlap 352060 352059 TAATCTCCACGGAAG CAGTCGA CATGT TCGGCTG TTTTCATTTTTGTTT SSU05_0364 352140 - 352514 + | hypothetical protein TERM 475 352602 - 352630 + F 81 -11.8 -2.66733 | opp_overlap 352596 352605 352609, overlap 352607 ATTACATTACCTCCA GAAGGCACTCGG TTGAT CCGAGTGTTTTC TGCTATCGATTCGCA TERM 476 352607 - 352625 + F 95 -10.3 -4.51378 | opp_overlap 352605 352609, overlap 352602 ATTACCTCCAGAAGG CACTCGG TTGAT CCGAGTG TTTTCTGCTATCGAT TERM 477 353096 - 353129 + G 73 -9.7 -2.91264 | GCGAGCTGGTCTCAA GTCTGTCTTGGTCAA ACCC TTGATAAAGACGGAC TCTATCAATACGCAG SSU05_0365 352686 - 353225 + | HAD superfamily hydrolase TERM 478 353334 - 353319 - g 74 -4.6 -4.84359 | overlap 353307 353321 353332 TCAGCCCTAGAAAAA GGCCTG GAAA CAGGGC AACTCTACTGCCAAC SSU05_0366 353226 - 353864 + | GTPase SSU05_0367 353845 - 354333 + | GTPase TERM 479 354697 - 354683 - g 75 -5.7 -4.61231 | TCAGATTGGGAAAAA TGGTC TAAAT GACCA GATTAAAACCAGTGT SSU05_0368 354606 - 354914 + | RNA-binding protein nadD 354927 - 355559 + | nicotinic acid mononucleotide adenylyltransferase TERM 480 355713 - 355703 - g 71 -3.2 -5.0538 | TGTGATCCGAAAAAA GCCA GTC TAGC AGCACTCTTGCATGA SSU05_0370 355556 - 356143 + | HD superfamily hydrolase SSU05_0371 356301 - 356411 + | histone acetyltransferase HPA2-like acetyltransferase TERM 481 356503 - 356517 + F 78 -8.6 -3.66356 | opp_overlap 356503 CCCGCACAGCTCAAA CTGTCT GGG AGACAG TTTGAGGTTGGAGAT TERM 482 356517 - 356503 - f 75 -8.6 -3.63627 | opp_overlap 356503 CCCGCACAGCTCAAA CTGTCT GGG AGACAG TTTGAGGTTGGAGAT TERM 483 356550 - 356536 - f 77 -10 -3.2614 | GAGGTTGGAGATGAA GCGAAC TCT GTTCGC ATCAGTCGTAGAGGC SSU05_0372 356692 - 356976 + | histone acetyltransferase HPA2-like acetyltransferase SSU05_0373 357106 - 357483 + | nicotinamidase-like amidase SSU05_0374 357485 - 357844 + | hypothetical protein TERM 484 357869 - 357845 - f 73 -10.2 -2.56181 | opp_overlap 357850, overlap 357844 357850 TTAGAAGAGGAATAG TGAAACAGTT TGGGG AACTGTTTCA GCTGGTCACCATAAA TERM 485 358069 - 358118 + F 100 -11 -4.82901 | gap 2 CCTAATCAACTGTGC GGGGGCAGGAAAACGAACTCTTTG GAAT TGAGGAGTTC-TT-TCCTGCTCCC TTTTTATGAAAGGAA TERM 486 358381 - 358371 - g 88 -6.8 -5.24129 | opp_overlap 358371 TTGGCCCAGAAAAAA GCAG AAG CTGC TGGTGTCATGATGGA SSU05_0375 358146 - 358889 + | SAM-dependent methyltransferase SSU05_0376 358933 - 362676 + | hypothetical protein SSU05_0377 362676 - 363035 + | hypothetical protein SSU05_0378 363094 - 363432 + | nucleotidyltransferase SSU05_0379 363538 - 364188 + | nucleotidyltransferase SSU05_0380 364284 - 364877 + | putative transcriptional regulator SSU05_0381 364907 - 365005 + | hypothetical protein TERM 487 366169 - 366159 - g 71 -6.8 -4.16016 | CTAGTTGTTAACAAA GCAG ACA CTGC GGCCTTATCAACTTT SSU05_0382 365244 - 367637 + | hypothetical protein TERM 488 368371 - 368350 - gT 88 -8.1 -4.67048 | GTACCTGAAAACAAA GAACAAGAA TACA TTCTTGTCC TCCTGGCAACGCCAG TERM 489 368374 - 368386 + GT 86 -9.1 -4.28254 | TACATTCTTGTCCTC CTGGC AAC GCCAG TTTTGGATGTTACAG SSU05_0384 368849 - 368673 - | hypothetical protein TERM 490 369391 - 369363 - gH 91 -11.9 -3.53091 | ACTTCCTTTGGGAAA TATTTTCCACATG AAT CATGAGGAAAATA CAGCAGTTCAGCTTT TERM 491 370797 - 370783 - gH 70 -2.8 -5.04325 | TTGAAAGCAGAAAAA GGGT TAGAGCC ACCC GCTTTGACACAGGTA SSU05_0383 367627 - 370965 + | putative ATP-binding protein SSU05_0385 370938 - 371444 + | hypothetical protein TERM 492 371449 - 371437 - g 100 -2.7 -6.48081 | TTGACAAAAAAAAAA CACTT TAA AAATG GGAATAAAAAAATGT SSU05_0386 371422 - 371559 + | hypothetical protein SSU05_0387 371556 - 371858 + | hypothetical protein SSU05_0388 372162 - 372374 + | N-formylmethionyl-tRNA deformylase TERM 493 372391 - 372376 - f 72 -7.6 -3.69323 | opp_overlap 372376 GGATTATCATCTAAA TCTACC GTCA GGTAGA TTTTTTTGTATAAAA TERM 494 372376 - 372391 + F 100 -7.6 -5.71712 | opp_overlap 372376 GGATTATCATCTAAA TCTACC GTCA GGTAGA TTTTTTTGTATAAAA TERM 495 373243 - 373261 + G 71 -6.8 -4.10161 | AATATCATTCTCTTC TTTGATGA AAT TCATCAGA TTTTGGGAGCTGGTA SSU05_0389 372679 - 373740 + | ATPases with chaperone activity, ATP-binding subunit SSU05_0390 373721 - 374473 + | ATPases with chaperone activity, ATP-binding subunit SSU05_0391 374496 - 374780 + | ATPases with chaperone activity, ATP-binding subunit TERM 496 374797 - 374827 + F 88 -5.7 -5.64873 | gap 1, opp_overlap 374803, overlap 374803 AATAGTGAAGAATTT GAA-AAATCGGATA GAAA TATCTGATTTTTTC TTTTTTGTTATTCGC TERM 497 374803 - 374820 + F 95 -4.9 -6.07374 | opp_overlap 374803, overlap 374797 GAAGAATTTGAAAAA TCGGATA GAAA TATCTGA TTTTTTCTTTTTTGT SSU05_0392 374963 - 376057 + | 4-alpha-glucanotransferase SSU05_0393 376039 - 376473 + | 4-alpha-glucanotransferase SSU05_0394 376457 - 378730 + | glucan phosphorylase TERM 498 378900 - 378861 - T 100 -13.8 -4.08706 | opp_overlap 378867 378896, overlap 378867 TCCTTAGTATATAAA TGCAAAGAATGTCTCTGC AAAA GCAGAGACATTCTTTTTA TAACTATAAAATTCT TERM 499 378867 - 378894 + T 100 -17.2 -4.89852 | opp_overlap 378861 378867 GTATATAAATGCAAA GAATGTCTCTGC AAAA GCAGAGACATTC TTTTTATAACTATAA TERM 500 378894 - 378867 - T 100 -17.2 -3.91402 | opp_overlap 378867, overlap 378861 GTATATAAATGCAAA GAATGTCTCTGC AAAA GCAGAGACATTC TTTTTATAACTATAA SSU05_0395 379665 - 378958 - | transcriptional regulator SSU05_0396 379864 - 380655 + | metal-dependent hydrolase SSU05_0397 380741 - 380980 + | phosphotransferase system IIC component, glucose/maltose/N-acetylglucosamine-specific SSU05_0398 380977 - 382857 + | phosphotransferase system IIC component, glucose/maltose/N-acetylglucosamine-specific TERM 501 382869 - 382904 + T 93 -6.5 -5.48213 | gap 2, opp_overlap 382869 GTAAAAAGTAAAAAA GATTGAAAAGATGATTG CAGT CAA-C-TCTTTTCAATC TTTTTCTTTTGGATA TERM 502 382904 - 382869 - T 93 -6.5 -5.54079 | gap 2, opp_overlap 382869 GTAAAAAGTAAAAAA GATTGAAAAGATGATTG CAGT CAA-C-TCTTTTCAATC TTTTTCTTTTGGATA SSU05_0399 383036 - 382899 - | hypothetical protein SSU05_0400 383556 - 383428 - | hypothetical protein SSU05_0401 383878 - 383567 - | transcriptional regulator TERM 503 383980 - 383962 - H 71 -9 -3.13475 | opp_overlap 383965, overlap 383965 CAACTGTATAGTGAA GAAGATTT TAA AAATCTTC TCAATCCTTGCCATT TERM 504 384283 - 384271 - g 74 -7.7 -3.94989 | opp_overlap 384271 384271, overlap 384266 384264 GAAACACAGACGAAA CCTTC GTG GAAGG TCGTTACGAAGGCTT TERM 505 384745 - 384730 - g 84 -6.2 -5.04987 | opp_overlap 384730 AAGACGTCCAAAAAA TCTACA CAAA TGTAGA TGGGTTTTAATATAA SSU05_0402 384039 - 384755 + | hypothetical protein TERM 506 384758 - 384786 + F 100 -14.9 -3.04322 | opp_overlap 384758 384766, overlap 384766 AGATGGGTTTTAATA TAAAAAAAGTGCT AGT AGCACTTTTTTTA TATTAAAAGGTTGGA TERM 507 384786 - 384758 - f 100 -14.9 -3.02263 | opp_overlap 384758 384766, overlap 384766 AGATGGGTTTTAATA TAAAAAAAGTGCT AGT AGCACTTTTTTTA TATTAAAAGGTTGGA TERM 508 384766 - 384778 + F 100 -7.7 -5.80817 | opp_overlap 384766 384758, overlap 384758 TTTAATATAAAAAAA GTGCT AGT AGCAC TTTTTTTATATTAAA TERM 509 384778 - 384766 - f 100 -7.7 -5.80817 | opp_overlap 384758 384766, overlap 384758 TTTAATATAAAAAAA GTGCT AGT AGCAC TTTTTTTATATTAAA TERM 510 384807 - 384826 + F 79 -10.8 -2.8474 | overlap 384805 384810 AAAGGTTGGAGATTG GAATCGTC GGTA GACGATTC TCATTGTACGTGGGA TERM 511 384868 - 384881 + F 95 -8.1 -5.05113 | GGTTGGAGATTGGAA CTGCC GTTA GGCAG TTTTCTTTGTATCCA SSU05_0403 385120 - 385968 + | hypothetical protein TERM 512 386207 - 386223 + G 73 -7.3 -4.13767 | TTCGTTGACTTACGG TCCATGG TGG TCATGGA TTTTGGCATCAGGGG SSU05_0404 385989 - 386534 + | hypothetical protein TERM 513 386546 - 386565 + F 100 -10.8 -5.08824 | TTAAGTTTTTATTTT CCCTAGAA AAAA TTCTAGGG TTTTTTCAATACCAA SSU05_0405 386624 - 387562 + | hypothetical protein TERM 514 387588 - 387616 + F 84 -4.6 -5.50499 | opp_overlap 387588 387592, overlap 387590 387592 CGAACCTTCAATAAA TGCAGTAGCATG TCATT CATGTTACCGTA TTTTTTTACATATAA SSU05_0406 387775 - 388758 + | hypothetical protein TERM 515 388791 - 388770 - T 73 -5.9 -4.44797 | opp_overlap 388770 TTAGTAATACCAAAA TTGCATTGA AAAA TCAGTGCAA TTTTTTTGTGCAATC TERM 516 388770 - 388791 + T 100 -8.1 -5.626 | opp_overlap 388770 TTAGTAATACCAAAA TTGCATTGA AAAA TCAGTGCAA TTTTTTTGTGCAATC SSU05_0407 388913 - 388815 - | hypothetical protein SSU05_0408 389085 - 389327 + | lactoylglutathione lyase TERM 517 389388 - 389409 + F 84 -5.1 -5.42259 | opp_overlap 389388 GAACTTATTTGAAAA GGGAGAAAC TGAT GATTCTTCC TTTTTTTCAGAGTCA SSU05_0409 389445 - 391118 + | ABC-type cobalt transport system, ATPase component SSU05_0410 391115 - 391948 + | ABC-type cobalt transport system, permease component CbiQ and related transporters SSU05_0411 392108 - 392311 + | cold shock protein TERM 518 392317 - 392343 + T 100 -13.1 -4.03586 | opp_overlap 392317 AATTGGATAATAAAA GAGCGGGTTTC TTAGT GAAACTCGCTC TTCTTATGTTTAAAG TERM 519 392343 - 392317 - T 100 -10.9 -4.78839 | opp_overlap 392317 AATTGGATAATAAAA GAGCGGGTTTC TTAGT GAAACTCGCTC TTCTTATGTTTAAAG gidB 393066 - 392353 - | glucose-inhibited division protein B TERM 520 392390 - 392410 + g 91 -6.2 -5.45802 | ATACCAGCTTTGCGT GGAAACTT ATTTG GAGTTTCC TTTTTCTTTTCGACG TERM 521 393026 - 393041 + g 93 -9 -4.41206 | opp_overlap 393024 393026 TCAGTTAATTGAATA CCTTGG TCTG CCAAGG TTTTATAAAATACTT TERM 522 393117 - 393102 - RH 100 -9 -5.54338 | opp_overlap 393102 393101 393096 TAAGCAAAAGAAAAA CCCAGA AGAG TCTGGG AATTTTCTTATTGAC TERM 523 393143 - 393155 + rH 81 -9.1 -4.11363 | overlap 393151 TTGACCATCTGTCTG TCCCG TTG CGGGA TTGTTTCCTGTTGTT SSU05_0414 395311 - 393125 - | membrane carboxypeptidase (penicillin-binding protein) SSU05_0413 393156 - 393299 + | hypothetical protein TERM 524 393688 - 393720 + gT 78 -9.2 -3.53444 | opp_overlap 393688, overlap 393708 393709 AACCGTAAGACATAA CAGCCTTCATCATG TCGGT CATCATGTAGGCTG TTTCGGCAGACATGA TERM 525 393720 - 393688 - GT 81 -9.2 -3.6914 | opp_overlap 393688 393708 393709 AACCGTAAGACATAA CAGCCTTCATCATG TCGGT CATCATGTAGGCTG TTTCGGCAGACATGA TERM 526 394231 - 394245 + gT 71 -5 -4.56978 | overlap 394199 394236 CGGCTTGGTTGGTAC CAAATG AGA CGTTTG TTTCTTGTTTACGAC TERM 527 395033 - 395045 + gT 70 -7.7 -3.57387 | ACGTTGGTCTTCGAT TGCGA CAA TCGCA TTTACCAAGTCTGTT recU 395897 - 395280 - | Holliday junction-specific endonuclease SSU05_0416 395963 - 396502 + | hypothetical protein SSU05_0417 396573 - 396908 + | cell division initiation protein TERM 528 397430 - 397444 + F 100 -10 -4.77165 | opp_overlap 397427 TGCATAAAATAGGTA GCTAGC TCT GCTAGC TTTTATTGTAGAGGA TERM 529 397994 - 397984 - g 76 -6.8 -4.57073 | TATCGGGTGGAAAAA GGTG GCG CACC AATCAAAGAAAATAT SSU05_0418 397465 - 398631 + | N6-adenine-specific DNA methylase TERM 530 399147 - 399135 - g 70 -2.7 -4.9218 | TAGGGATCAGAAAAA GAAAT TTT ACTTC TGGTCAGCAGTAGGG SSU05_0419 398641 - 400095 + | hypothetical protein TERM 531 400121 - 400160 + T 88 -5.2 -5.7827 | gap 1 GGTTTATCTGCTTCG GATTGAAG-AAAAAGTTCA TTT TGGACAATTTCCTTCAATC TTTTTTCTTTGTGTT TERM 532 400293 - 400274 - T 91 -13.6 -2.53581 | TATATCTCCAACCTA GCACAGCC ACTA GGCTGTGC TAGCAACCTGCACCT TERM 533 400386 - 400351 - T 100 -8.4 -5.67063 | opp_overlap 400351 TCGACTATAAAAAAA CTCTCAGAAACGCCGA AATA TCAATGTTTCTAAGAG TTTAATGATTTGCTA TERM 534 400457 - 400469 + T 93 -6.2 -5.83226 | TTGTCTACGTTCTGA GCGG TGTAT CCGC TTTTTTTGTTAGATT SSU05_0420 400972 - 400478 - | S-ribosylhomocysteinase TERM 535 402675 - 402660 - g 70 -5.4 -4.51363 | CAGGAAATATCAAAA TCACAG TTAT CCGTGA AACAAGAGCAACAGA SSU05_0421 401090 - 402703 + | hypothetical protein TERM 536 402712 - 402726 + F 89 -7.8 -4.9218 | opp_overlap 402712 TAAGTAAATGTAGAA GAGTCC GAA GGGCTC TTTTTCTACTGGCTC gmk 402834 - 403484 + | guanylate kinase SSU05_0423 403508 - 403822 + | DNA-directed RNA polymerase subunit omega TERM 537 403831 - 403853 + F 83 -6.9 -4.74598 | opp_overlap 403829 403831 GATTTAGATACAAGA CTCGGTTGG GATTG CCATCCGGG TTTCTTTTCACTTTC SSU05_0424 403967 - 406405 + | primosome assembly protein PriA TERM 538 406401 - 406424 + F 100 -8.2 -6.09196 | opp_overlap 406401 AACCGCAGAATATGA TGTGAGGTCA CTAT TGACCTTGCA TTTTTTTGTTTTAAG TERM 539 406679 - 406666 - g 87 -5.3 -5.52384 | GTTGGACGAAAAAAA GTCAT CCAA ATGAC ACCTGTGAAAGAAGT fmt 406537 - 407475 + | methionyl-tRNA formyltransferase SSU05_0426 407462 - 408775 + | tRNA and rRNA cytosine-C5-methylase SSU05_0427 408738 - 409550 + | Serine/threonine protein phosphatase TERM 540 409875 - 409859 - g 73 -5.9 -4.55721 | AAACGTTATATAAAA GAAAATG CAC CACTTTC CAACGATGTTGCGGT SSU05_0428 409550 - 411544 + | Serine/threonine protein kinase TERM 541 411616 - 411586 - f 73 -9.8 -2.57092 | opp_overlap 411587, overlap 411591 AATGTCATTAAGTTA TCTAACCTATCACA TTT TGTGATGGGTTAGT TTTTTTATGTTACAC TERM 542 411587 - 411615 + F 100 -15.5 -5.80817 | opp_overlap 411586 411591 ATGTCATTAAGTTAT CTAACCTATCACA TTT TGTGATGGGTTAG TTTTTTTATGTTACA SSU05_0429 411908 - 412660 + | hypothetical protein SSU05_0431 413189 - 413281 + | hypothetical protein SSU05_0430 412657 - 413673 + | Signal transduction histidine kinase TERM 543 413978 - 413964 - gf 70 -6.4 -4.13014 | GCTATATGTTGAAAA CGTCAA GTG CTGACG AAATCTTAGCAGCCA SSU05_0432 413645 - 414136 + | response regulator TERM 544 414321 - 414303 - f 70 -5.4 -4.48987 | GTGGTATAATGAAAA TTAGTTAA TTT TTAACCAA AGGATAGTGGAATTA TERM 545 414798 - 414787 - g 71 -3 -4.99043 | opp_overlap 414787 TTTTTATAAAGAAAA TGAT ATCT ATCA ATTGTTAACTTTCGA TERM 546 415591 - 415579 - g 73 -5.5 -4.62336 | opp_overlap 415579 AGCCTATGTCAAAAA TGGCG GGA CACCA TATCTGGATCAACGC SSU05_0433 414338 - 415738 + | HAD superfamily hydrolase SSU05_0434 415740 - 416111 + | hypothetical protein TERM 547 416102 - 416129 + T 89 -7.9 -4.92756 | gap 1, opp_overlap 416102 AGAACACAAAGAAAA GAAGGTATAGGA TGCAT TCCTA-ACCTTC TTTCTTTTTAATCAT TERM 548 416129 - 416102 - T 93 -7.9 -5.11389 | gap 1, opp_overlap 416102 AGAACACAAAGAAAA GAAGGTATAGGA TGCAT TCCTA-ACCTTC TTTCTTTTTAATCAT SSU05_0435 417111 - 416137 - | O-acetylserine lyase TERM 549 417146 - 417132 - R 91 -4.3 -5.84432 | opp_overlap 417132, overlap 417124 GATAATATAAAAAAA CTATC TCGCC GATAG CTTTTTTTAATAGAC SSU05_0436 417791 - 417153 - | hypothetical protein SSU05_0437 417839 - 419134 + | superfamily II DNA/RNA helicase SSU05_0438 419127 - 419792 + | amidophosphoribosyltransferase SSU05_0439 419833 - 420411 + | ribosome-associated protein Y (PSrp-1) TERM 550 420453 - 420413 - Tf 78 -7.8 -4.18488 | opp_overlap 420415 420418 420423, overlap 420415 420418 420423 AGGTACGTCAATAAA GATAATAAAACAGTTGCA GTTTT TGCAGCTGTTTTATCATT TTCAAAAAACCGGTT TERM 551 420451 - 420415 - Tf 86 -10.4 -3.69068 | opp_overlap 420415 420418 420423, overlap 420413 420418 420423 GTACGTCAATAAAGA TAATAAAACAGTTGCA GTTTT TGCAGCTGTTTTATCA TTTTCAAAAAACCGG TERM 552 420415 - 420451 + TF 89 -11.1 -4.07568 | opp_overlap 420415 420413 420418 420423, overlap 420418 420423 GTACGTCAATAAAGA TAATAAAACAGTTGCAG TTT TTGCAGCTGTTTTATCA TTTTCAAAAAACCGG TERM 553 420418 - 420448 + TF 88 -12.8 -3.08032 | opp_overlap 420415 420413 420418 420423, overlap 420415 420423 CGTCAATAAAGATAA TAAAACAGTTGCAG TTT TTGCAGCTGTTTTA TCATTTTCAAAAAAC TERM 554 420448 - 420418 - Tf 85 -9.9 -3.96841 | opp_overlap 420418 420415 420423, overlap 420415 420413 420423 CGTCAATAAAGATAA TAAAACAGTTGCA GTTTT TGCAGCTGTTTTA TCATTTTCAAAAAAC TERM 555 420423 - 420443 + TF 88 -8.3 -4.67635 | opp_overlap 420418 420415 420413 420423, overlap 420418 420415 ATAAAGATAATAAAA CAGTTGCAG TTT TTGCAGCTG TTTTATCATTTTCAA TERM 556 420443 - 420423 - Tf 78 -5.4 -4.96657 | opp_overlap 420423 420418 420415, overlap 420418 420415 420413 ATAAAGATAATAAAA CAGTTGCA GTTTT TGCAGCTG TTTTATCATTTTCAA TERM 557 420612 - 420591 - Tf 71 -8.7 -3.25317 | overlap 420589 420587 TGATAAACTAAGATA GTTGTCGCG AGAG CGCGATAAC GACAAGACCTTTGAA TERM 558 421757 - 421770 + TF 73 -6.7 -4.1891 | ACATCCCGATGACCG CCCTA GAGA TAGGG TTTCTCTTCGGAGCA TERM 559 422963 - 422984 + TF 74 -10.1 -2.58544 | opp_overlap 422964, overlap 422962 ACGGCAGGAGGGCAA ACCGAGGAG TTTA CTCCTCGGG GTTGTAGGACTGCAA TERM 560 422983 - 422964 - Tf 100 -13.6 -3.62096 | opp_overlap 422963 422962 CGGCAGGAGGGCAAA CCGAGGAG TTTA CTCCTCGG GGTTGTAGGACTGCA TERM 561 423040 - 423025 - Tf 74 -7.6 -3.92604 | AAGAGTATAGAAGAA CTACCT GGGA AGGTAG GCCAAAGAGAGTAAT TERM 562 423063 - 423073 + TF 74 -2.6 -5.28176 | AGAGTAATAGCCTCG TATT TAA AATA TTTTTTATACCTAGC TERM 563 425764 - 425776 + TF 78 -10.5 -3.09327 | ACGCCTGAAGTAGTT GGGGG TTG CCCCC TGTTAGATACGGTAG TERM 564 426099 - 426121 + TF 72 -8.4 -3.55444 | GCGGAATTGGCAGAC GCACCAGATT TAG GATCTGGCGC TTTCGGGCGTGGGGG TERM 565 426299 - 426279 - Tf 78 -9.7 -3.31263 | overlap 426281 AGTTCAGTGGTAGAA CACCACCTT GCC AAGGTGGGG GTCGCGGGTTCGAAT TERM 566 426297 - 426281 - Tf 80 -10.9 -3.22475 | overlap 426279 TTCAGTGGTAGAACA CCACCTT GCC AAGGTGG GGGTCGCGGGTTCGA TERM 567 426643 - 426656 + TF 100 -3.1 -6.38039 | CCGATTATTGTAAGA GAGCA GCAA TGTTC TTTTTTTTTTGGCTC TERM 568 426711 - 426733 + TF 100 -12.8 -4.76802 | opp_overlap 426708 426715 AAAAGCTAACACCTA GAGAGGACGA AAT TCGTTCTCTC TTTCTTGTTTTTAGG SSU05_0442 426942 - 426787 - | hypothetical protein SSU05_0441 426738 - 426926 + | hypothetical protein TERM 569 427134 - 427191 + TFrH 100 -8.5 -5.33921 | opp_overlap 427139, overlap 427139 CTTTTTTCTACACTC AAAAAGGCTCTATATGACCATAGTGGG TTTA CCCGTCATAGTCTTATAGTGCCTTTTA TTTTTTGCTTAGTTT TERM 570 427186 - 427139 - TfRH 88 -8.4 -4.70659 | opp_overlap 427134 427139 TTCTACACTCAAAAA GGCTCTATATGACCATAGTGGG TTTA CCCGTCATAGTCTTATAGTGCC TTTTATTTTTTGCTT TERM 571 427139 - 427186 + TFrH 100 -8.4 -5.47846 | opp_overlap 427139, overlap 427134 TTCTACACTCAAAAA GGCTCTATATGACCATAGTGGG TTTA CCCGTCATAGTCTTATAGTGCC TTTTATTTTTTGCTT SSU05_0444 428541 - 427189 - | SAM-dependent methyltransferase related to tRNA (uracil-5-)-methyltransferase TERM 572 428716 - 428730 + GH 73 -6.4 -4.34771 | opp_overlap 428700 CACGGAGCAGGAGTT TCGTGA GCT TCGCGA TTTTGCTCAGTTTTC recX 428474 - 429355 + | recombination regulator RecX TERM 573 429647 - 429635 - g 76 -2.7 -5.252 | TATTTTCATAAAAAA TACTG GTT CAATA TCATTGCAATGATTC SSU05_0445 429431 - 429964 + | hypothetical protein TERM 574 429980 - 429994 + F 86 -4.2 -5.68489 | opp_overlap 429975 429980 429981, overlap 429981 AGTTAGAAAAGAAAA TCCTGT TTT ACAGGC TTTTTTCTTATTGTA TERM 575 429994 - 429980 - f 76 -4.2 -5.19275 | opp_overlap 429980 429981, overlap 429975 429981 AGTTAGAAAAGAAAA TCCTGT TTT ACAGGC TTTTTTCTTATTGTA TERM 576 429981 - 429993 + F 74 -7.7 -3.98653 | opp_overlap 429981 429980 429975, overlap 429980 GTTAGAAAAGAAAAT CCTGT TTT ACAGG CTTTTTTCTTATTGT TERM 577 429993 - 429981 - f 72 -7.7 -3.69938 | opp_overlap 429980 429981, overlap 429980 429975 GTTAGAAAAGAAAAT CCTGT TTT ACAGG CTTTTTTCTTATTGT TERM 578 430073 - 430091 + G 74 -9.6 -3.35869 | TTTGGAGTTGTGACT TCGCTTCC TGG GGAAGTGA TTGATAGTTTCTGGT SSU05_0446 430022 - 430339 + | hypothetical protein SSU05_0447 430415 - 431170 + | transcriptional regulator TERM 579 431287 - 431304 + T 100 -9.1 -5.42259 | opp_overlap 431287 TGGGTATGAAAAAAA CGCGGAC GTTA GTCTGCG TTTTTTTAGCGATGG TERM 580 431304 - 431287 - T 100 -6.9 -5.52384 | opp_overlap 431287 TGGGTATGAAAAAAA CGCGGAC GTTA GTCTGCG TTTTTTTAGCGATGG SSU05_0448 432041 - 431310 - | transcriptional regulator TERM 581 432243 - 432253 + G 75 -5.4 -4.87133 | TGAAAGAATTTTATA TTGG AGA CCAA TTTTATTTGGACGGT SSU05_0449 432227 - 433999 + | Beta-galactosidase SSU05_0450 434053 - 434538 + | phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB SSU05_0451 434580 - 435479 + | phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC SSU05_0452 435430 - 436284 + | phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID SSU05_0453 436284 - 436685 + | phosphotransferase system, mannose/fructose-specific component IIA SSU05_0454 436901 - 437902 + | galactose mutarotase-like protein TERM 582 437914 - 437936 + G 100 -11.4 -4.98917 | GTAAAAAAATGGGGA CTCTAACTGT GTT ACAGTTAGGG TTTTCTTGTGTTTTC TERM 583 438218 - 438195 - g 70 -7.5 -3.76952 | opp_overlap 438195 TTCATTCAAGGGAAA TTTGCCAAC TACCAT GCTGGCAAA GGTTTTCATGATTTG SSU05_0455 437907 - 438266 + | hypothetical protein TERM 584 438602 - 438590 - g 77 -4.8 -5.06505 | AACCATACAGAAAAA GAGC TCTTG GCTC TTAAAGGCATCGGTC SSU05_0456 438281 - 438667 + | superfamily II helicase TERM 585 438672 - 438647 - f 78 -5.5 -4.9792 | gap 1, opp_overlap 438647 438643, overlap 438669 CAGTTGACAGAAAAA GGGA-TTGAGCT GAA AGCTTAAATCCC TTGCTTTTCAAGGTA TERM 586 438647 - 438672 + F 72 -7.7 -3.67622 | gap 1, opp_overlap 438647 438669, overlap 438643 CAGTTGACAGAAAAA GGGA-TTGAGCT GAA AGCTTAAATCCC TTGCTTTTCAAGGTA TERM 587 438832 - 438812 - f 73 -6.9 -4.09292 | AATCGAATAAGCAAA GTGCAGATA ATG TATCTGAAC AAGGGTGGTACCGCG TERM 588 438859 - 438885 + F 95 -10.9 -4.54727 | CGCGGAATAACTTCG TCCCTGTCTAG CAAGT CTAGGCGGGGA TTTTCATTTGGAAAG SSU05_0457 438919 - 439299 + | lactoylglutathione lyase and related lyases SSU05_0458 439296 - 439871 + | shikimate kinase TERM 589 439896 - 439864 - f 100 -12.1 -4.48713 | opp_overlap 439869, overlap 439865 TTGAGCAAGAACAAA CGAAATAGCCAGCCC AAA GGACTGACTATTTCT AGGAGATTATATGAA TERM 590 439895 - 439865 - f 100 -15.6 -3.28505 | opp_overlap 439869, overlap 439864 TGAGCAAGAACAAAC GAAATAGCCAGCCC AAA GGACTGACTATTTC TAGGAGATTATATGA TERM 591 440061 - 440047 - g 73 -8.6 -3.72576 | opp_overlap 440046 440044 440047 CTGGTCGTTACCAAA CTTGGT TGG ACCAAG ATGTTTTTAAGCCGT TERM 592 442529 - 442503 - g 71 -3 -5.00884 | overlap 442504 442507 ATGGTCGGCAAAAAA CTCAGCAACGAA CGC TTCATTGCCAAC GCTAAACCAGAAGTC valS 439986 - 442637 + | valyl-tRNA synthetase TERM 593 442656 - 442675 + F 95 -10.7 -4.52047 | opp_overlap 442655 442654 442656 GAATACGATAAAATG CCCAGCC TAAAAT GGCTGGG TTTTGTGGTATAATA TERM 594 442675 - 442656 - f 76 -10.7 -2.58651 | opp_overlap 442656, overlap 442655 442654 GAATACGATAAAATG CCCAGCC TAAAAT GGCTGGG TTTTGTGGTATAATA SSU05_0460 443562 - 443837 + | hypothetical protein TERM 595 444051 - 444038 - gf 76 -2.5 -5.25154 | opp_overlap 444038 AAAAAAATAAGAAAA TAAAA GAAT TTTTA TTTGAACTTTTACTT SSU05_0461 443806 - 445509 + | hypothetical protein TERM 596 445549 - 445533 - f 72 -3.7 -5.03994 | TTGGACATAGAAAAA CTTGAGA TTT TATCAAG CGTTACCAATCTGGA TERM 597 445702 - 445662 - f 80 -10.6 -3.39595 | gap 1, opp_overlap 445673, overlap 445667 445671 445673 GTTAAGTAGGTAGAA TACAACAAATGCCCAGCCT AAAA AGGCTGGGT-TTTGTGGTA TAATAAGGTTAGAAA TERM 598 445697 - 445667 - f 78 -9.1 -3.76568 | gap 1, opp_overlap 445673, overlap 445662 445671 445673 GTAGGTAGAATACAA CAAATGCCCAGCCT AAAA AGGCTGGGT-TTTG TGGTATAATAAGGTT TERM 599 445694 - 445671 - f 76 -6.6 -4.49353 | opp_overlap 445673, overlap 445667 445662 445673 GTAGAATACAACAAA TGCCCAGCCT AAAA AGGCTGGGTT TTGTGGTATAATAAG TERM 600 445673 - 445692 + F 100 -13.6 -4.52047 | opp_overlap 445671 445667 445662 445673 AGAATACAACAAATG CCCAGCCT AAAA AGGCTGGG TTTTGTGGTATAATA TERM 601 445692 - 445673 - f 91 -13.6 -2.56032 | opp_overlap 445673, overlap 445671 445667 445662 AGAATACAACAAATG CCCAGCCT AAAA AGGCTGGG TTTTGTGGTATAATA SSU05_0462 445736 - 446542 + | hypothetical protein TERM 602 446662 - 446689 + G 70 -5.6 -4.30441 | gap 1 ATTATGAAAAATTAA CGGGTAAGGTTGC AAA GCA-TCTTGCTCG TTTTCCCTATTATGC SSU05_0463 446637 - 449345 + | superfamily II DNA/RNA helicase TERM 603 449372 - 449351 - f 90 -3 -5.99154 | opp_overlap 449349 449351 TATTAAATAAAAAAA TCCGAATA CTGTTC TGTTCGGA TATTTCTTTAAAAAA SSU05_0464 449449 - 450183 + | hypothetical protein SSU05_0465 450196 - 451350 + | transcriptional regulator SSU05_0466 451347 - 452423 + | hypothetical protein SSU05_0467 452547 - 453500 + | asparagine synthetase AsnA TERM 604 453518 - 453501 - f 70 -8.5 -3.37474 | opp_overlap 453501 GAGAATATTTTATAA GAGATTG GCTT CAATCTC TTTTCTTCTGCTTTC TERM 605 453501 - 453518 + F 95 -8.5 -4.86902 | opp_overlap 453501 GAGAATATTTTATAA GAGATTG GCTT CAATCTC TTTTCTTCTGCTTTC SSU05_0468 453633 - 455480 + | membrane GTPase involved in stress response SSU05_0469 455498 - 455746 + | hypothetical protein TERM 606 455856 - 455910 + F 100 -12.4 -4.99035 | opp_overlap 455868 TTATATTCTGTGATA CATCTTGAAGAAGCTCTCGTTATTTA TAA TAAATGACAAGCGCATTTTCAAGGTG TTTTTATGTAGATAA TERM 607 456080 - 456061 - f 82 -12.2 -2.53263 | opp_overlap 456057 456056 456064, overlap 456064 CTTATTTCCAACCTA GAACAGCC TCTA GGCTGTTC TAGCTACCTGCACAT TERM 608 456077 - 456064 - f 70 -8.1 -3.42056 | opp_overlap 456057 456056 456064, overlap 456061 ATTTCCAACCTAGAA CAGCC TCTA GGCTG TTCTAGCTACCTGCA TERM 609 456064 - 456077 + F 70 -8.1 -3.36878 | opp_overlap 456064 456061, overlap 456057 456056 ATTTCCAACCTAGAA CAGCC TCTA GGCTG TTCTAGCTACCTGCA TERM 610 456285 - 456261 - f 73 -5.9 -4.40184 | GTAATTAAAGACAAA TTAAATAACTA TAT TAGTCATTCAA ACCTAAATGAGAGGG SSU05_0470 456453 - 456713 + | ATPase involved in DNA repair SSU05_0471 456694 - 457296 + | Signal peptidase I SSU05_0472 457328 - 457477 + | ribonucleases G and E TERM 611 457845 - 457830 - g 80 -4.7 -5.20216 | CACATTATGAAAAAA CCAAG GAGAAG CTTGG AGTAAAAAAACTTGT TERM 612 461838 - 461826 - g 70 -5.5 -4.4727 | opp_overlap 461832 461833, overlap 461828 461831 TCAAGATTCAGAAAA CAGAC CTG GCCTG GCAGGCCCTTTCAGG SSU05_0473 457493 - 462304 + | ribonucleases G and E TERM 613 463418 - 463407 - g 74 -4.4 -5.011 | ACTGAAACAACAAAA GTGA CTAC TCAC CGTTTCACTTTGAAA SSU05_0474 462411 - 463853 + | autotransporter adhesin SSU05_0475 463895 - 464749 + | sortase (surface protein transpeptidase) TERM 614 464878 - 464850 - f 73 -6.8 -4.23892 | opp_overlap 464840 464850, overlap 464843 TTGAACTATTGAAAA TGTTTCAAAGTC GATTT GACTCTGGAACA TTTTTCTATTATAGA TERM 615 464850 - 464878 + F 93 -7.5 -5.1523 | opp_overlap 464843 464850, overlap 464840 TTGAACTATTGAAAA TGTTTCAAAGTCG ATT TGACTCTGGAACA TTTTTCTATTATAGA murD 465410 - 466759 + | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase murG 466762 - 467826 + | N-acetylglucosaminyl transferase TERM 616 468176 - 468166 - g 87 -5.4 -5.4659 | GAATAGAAAGAAAAA CAGA GAG TCTG AAATCTAAAAAGGAA SSU05_0478 467832 - 468914 + | cell division septal protein SSU05_0479 469067 - 469492 + | Actin-like ATPase involved in cell division TERM 617 469961 - 469971 + G 73 -5.4 -4.61231 | AGTGATTGCGGCACG TCTG CGT CAGA TTTTTGACCGTGTGA TERM 618 470090 - 470109 + G 77 -5 -5.07486 | opp_overlap 470088, overlap 470081 ATTGGCCCAAGAAGT GTTTGGTG TTAA CACTAAGC TTTTTGTTCCAAATC SSU05_0480 469506 - 470447 + | Actin-like ATPase involved in cell division SSU05_0481 470473 - 471702 + | cell division protein FtsZ SSU05_0483 471812 - 471717 - | hypothetical protein TERM 619 471802 - 471825 + Gg 72 -9.6 -3.14693 | opp_overlap 471800 471802, overlap 471800 471798 TCAGTAAAGGTAATA GCTGTCACCA AATA TGTTGACAGC TCTATTGCTAATCAG TERM 620 471825 - 471802 - Gg 72 -9.6 -3.21807 | opp_overlap 471802 471800 471798, overlap 471800 TCAGTAAAGGTAATA GCTGTCACCA AATA TGTTGACAGC TCTATTGCTAATCAG SSU05_0482 471709 - 472380 + | TIM-barrel fold family protein SSU05_0484 472358 - 472960 + | hypothetical protein SSU05_0485 472965 - 473228 + | integral membrane protein TERM 621 473555 - 473565 + G 70 -5.4 -4.42653 | opp_overlap 473555 TTATCCCATTCACAA GTTC TTG GAAC TTTTCTCAATCAACT TERM 622 473953 - 473970 + G 71 -4.2 -4.82901 | ATATGGTAGAGTTCG CCTAAA TGAATT TTTAGG TTTTTCTAAGCAAGG SSU05_0486 473231 - 474022 + | S4-like domain-containing protein SSU05_0487 474031 - 474720 + | cell division initiation protein SSU05_0488 474902 - 475393 + | histone acetyltransferase HPA2-like acetyltransferase TERM 623 476329 - 476347 + G 71 -9.6 -3.01924 | opp_overlap 476329 476328, overlap 476322 GAGAAGTGGATGAAT TGGTCATC TTG GGTGACCA TGTTACAACGGACTC ileS 475401 - 478193 + | isoleucyl-tRNA synthetase TERM 624 478217 - 478234 + T 91 -6.3 -5.67967 | opp_overlap 478217 AATACATTTGTTAAA GTCTATC TAGC GATAGGC TTTTTTTGTAATACT TERM 625 478376 - 478361 - T 100 -9 -5.90231 | ATAAATAGAAAAAAA GAAGCC ATCT GGCTTC TTACAGAACGTAGAC TERM 626 478483 - 478448 - T 74 -8.4 -3.80114 | opp_overlap 478448 TAGCAAGTGATTAAA CTCTTAGAAACATTGA TATT TCAGCGTTTCTGAGAG TTTTTTATTTTCAAC TERM 627 478448 - 478483 + T 100 -10.6 -5.79595 | opp_overlap 478448 TAGCAAGTGATTAAA CTCTTAGAAACATTGA TATT TCAGCGTTTCTGAGAG TTTTTTATTTTCAAC TERM 628 478550 - 478511 - T 100 -8.8 -5.7827 | gap 1, opp_overlap 478524 478525 AACATAAAGAAAAAA GATTGAAGACAATTGTCCA AAA TGGACCTTT-TCTTCAATC TGAAAGAAGCCAGAT TERM 629 478551 - 478576 + T 76 -10.5 -2.60212 | opp_overlap 478556, overlap 478550 ACCTTTTCTTCAATC TGAAAGAAGCC AGAT GGCTTCTTACA CTTCTGCGATAATGG TERM 630 478571 - 478556 - T 78 -9 -3.66178 | opp_overlap 478551 478550 TTCTTCAATCTGAAA GAAGCC AGAT GGCTTC TTACACTTCTGCGAT SSU05_0490 478880 - 478572 - | hypothetical protein SSU05_0491 479402 - 478935 - | MutT family hydrolase TERM 631 479286 - 479265 - G 72 -6.5 -4.2704 | opp_overlap 479265, overlap 479266 TCCACCAGGAAGAAA CCAAGCTCC GTTT GGTGCTTGA ACGAGTATGATCTGT TERM 632 479430 - 479448 + r 91 -4.6 -5.80727 | opp_overlap 479430 TCATTATTGGAATGA GTTGTATA CAT TATACCAC TTTTTTATTATTTTT TERM 633 479476 - 479490 + r 100 -7.2 -5.626 | TTTCCTTGTGATAGG CTTTAC AAA GTAAAG TTTTTTTATAGGATG TERM 634 479576 - 479551 - R 71 -4.8 -4.56729 | gap 1, opp_overlap 479538 479562, overlap 479554 AGCAAAACAGTAAAA TAG-GCTACTC GTAGA GAGCAGCTCTA TTTTCTTATTTTGTC TERM 635 479562 - 479576 + r 76 -4.3 -5.12916 | opp_overlap 479554 479551, overlap 479538 AAAATAGGCTACTCG TAGAG AGCAG CTCTA TTTTCTTATTTTGTC SSU05_0492 481810 - 479582 - | ATPases with chaperone activity, ATP-binding subunit TERM 636 480499 - 480509 + g 75 -3.2 -5.10933 | CGAGGCTCACAAGCT GGGA CTG TTCC TTTTCTTTTAAATCA SSU05_0493 482034 - 482264 + | hypothetical protein TERM 637 482278 - 482291 + F 100 -8.1 -5.60689 | opp_overlap 482275 AAGAAGAAGTGAGAG GCACC TAAG GGTGC TTTTTTCTTGTGTAA SSU05_0494 482390 - 482872 + | ABC-type amino acid transport system, permease component SSU05_0495 482806 - 483078 + | ABC-type amino acid transport system, permease component SSU05_0496 483071 - 483805 + | putative amino acid ABC transporter, ATP-binding protein TERM 638 483827 - 483844 + F 95 -7 -5.24989 | AACAAATAAGTACGA CTCCGA TATTGT TCGGAG TTTTTTGCTATATGC SSU05_0497 483935 - 484783 + | 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase TERM 639 485212 - 485193 - f 70 -6.4 -4.10007 | opp_overlap 485194, overlap 485194 ATAATCTCCTGAAAA GCCTGATC GTGT GATCAGGT TTTTTTGTATGCAAA TERM 640 485211 - 485194 - f 76 -9.9 -3.05522 | opp_overlap 485194, overlap 485193 TAATCTCCTGAAAAG CCTGATC GTGT GATCAGG TTTTTTTGTATGCAA TERM 641 485194 - 485211 + F 100 -9.9 -5.71712 | opp_overlap 485194 485193 TAATCTCCTGAAAAG CCTGATC GTGT GATCAGG TTTTTTTGTATGCAA SSU05_0498 486232 - 486525 + | hypothetical protein SSU05_0499 486509 - 487117 + | putative signal peptidase IB SSU05_0500 487136 - 487522 + | hypothetical protein SSU05_0502 487900 - 487523 - | hypothetical protein TERM 642 488591 - 488573 - gH 93 -11.8 -3.71792 | opp_overlap 488576, overlap 488569 CGAATTGAAAATCAA CTACTTGC TAG GCAAGTAG TCTCAGAAGGATCAA SSU05_0501 487868 - 488707 + | sortase-like protein TERM 643 489011 - 489026 + G 84 -5.4 -5.26316 | opp_overlap 489011 TTATAGGGGAGAAAA TCTGGG GAAA CTCAGA TTTTTTGTCGCATAC SSU05_0503 488964 - 489500 + | putative mercuric resisitant regulatory protein TERM 644 489511 - 489489 - T 100 -10.7 -5.08824 | opp_overlap 489489 GGTTCATGCAAAAAA GACAGAGAA TAACT TTCTCTGTC TTCATACTTCATTAT TERM 645 489489 - 489511 + T 80 -10.7 -3.30956 | opp_overlap 489489 GGTTCATGCAAAAAA GACAGAGAA TAACT TTCTCTGTC TTCATACTTCATTAT SSU05_0504 489876 - 489526 - | hypothetical protein TERM 646 489647 - 489636 - G 71 -2.2 -5.08601 | TGATGGCAATAAAAA CAGG AATG CCTA CAGATAGATAGACAT TERM 647 490064 - 490052 - g 74 -7.7 -3.94634 | opp_overlap 490039 GAGCAGGTCAAAGAA CTGCT TGT AGCAG GCGTTGACCGCATTT SSU05_0505 489998 - 490927 + | collagenase-like protease TERM 648 491020 - 491009 - f 75 -7.2 -4.33274 | opp_overlap 491009 491008 GTCAGAGCACGAAAA CGCC TTTG GGCG ATTTTCTAATCTCTG SSU05_0506 491222 - 492511 + | collagenase-like protease TERM 649 492555 - 492569 + T 80 -8.6 -3.94 | opp_overlap 492555 TACTTCGACGTAAGA GGAAAC TCC GTTTCC TTATTTCCAACTTCA TERM 650 492569 - 492555 - T 70 -8.6 -3.08996 | opp_overlap 492555 TACTTCGACGTAAGA GGAAAC TCC GTTTCC TTATTTCCAACTTCA TERM 651 492738 - 492723 - T 100 -9 -5.02201 | AAAAGACTATAAAAA GGCTGA AATT TCAGCC TCAGAACGTAGATAA TERM 652 492809 - 492844 + T 100 -8.4 -5.0925 | opp_overlap 492809 TAGCAAGTCATTAAA CTCTTAGAAACATTGA TATT TCGGCGTTTCTGAGAG TTTTTAATTTTCAAC TERM 653 492911 - 492872 - T 100 -13.2 -5.7827 | gap 1, opp_overlap 492886 492905 AACATAAAGAAAAAA GATTGAAGAAAATTGTCCA AAA TGGACT-TTTTCTTCAATC TGCAAGGCTGAAATT TERM 654 492886 - 492898 + T 93 -7.7 -5.12068 | opp_overlap 492872 AGATTGAAGAAAATT GTCCA AAA TGGAC TTTTTCTTCAATCTG TERM 655 492917 - 492932 + T 100 -9 -5.18297 | overlap 492905 TTCTTCAATCTGCAA GGCTGA AATT TCAGCC TTTTGTTTGTTGTTG SSU05_0507 493250 - 492927 - | hypothetical protein SSU05_0508 493342 - 493557 + | hypothetical protein TERM 656 493564 - 493586 + T 93 -7.8 -5.14563 | opp_overlap 493563 493564 AATAAATAAATGAAG GAAGCCTA AGCAAAA TAGGCTTC TTTTTTGATAACAGG SSU05_0509 494108 - 493569 - | hypothetical protein SSU05_0510 494301 - 495050 + | hypothetical protein TERM 657 495086 - 495056 - T 91 -6.3 -5.67967 | gap 1, opp_overlap 495056, overlap 495045 ATTACCATAAAAAAA GTCCAGACAGTG CTGACCTT CA-TGTCTGGAC TTTTTCAATTGAGTT TERM 658 495056 - 495086 + T 78 -6.3 -4.75776 | gap 1, opp_overlap 495056 495045 ATTACCATAAAAAAA GTCCAGACAGTG CTGACCTT CA-TGTCTGGAC TTTTTCAATTGAGTT SSU05_0511 496101 - 495100 - | hypothetical protein SSU05_0512 496511 - 496065 - | glutathione reductase TERM 659 496698 - 496672 - gH 100 -9.6 -4.62069 | opp_overlap 496671 496680, overlap 496656 496680 TTGTTATGTTAAAAA CAAAGAAAGCAA AAA TTGCTTTGTTTG GTGGTCTTGGAGTGG TERM 660 496680 - 496690 + GH 70 -5.4 -4.52345 | opp_overlap 496672 496680, overlap 496671 TTAAAAACAAAGAAA GCAA AAA TTGC TTTGTTTGGTGGTCT TERM 661 496690 - 496680 - gH 78 -5.4 -4.94811 | opp_overlap 496680 496671, overlap 496672 TTAAAAACAAAGAAA GCAA AAA TTGC TTTGTTTGGTGGTCT SSU05_0513 496635 - 497819 + | membrane-fusion protein SSU05_0514 497779 - 498192 + | peptide ABC transporter ATPase SSU05_0515 498203 - 498496 + | peptide ABC transporter ATPase TERM 662 498955 - 498966 + GF 76 -5.8 -4.65168 | opp_overlap 498955, overlap 498936 TCAGTTTACAGCTAA CGAC TATA GTCG TTTTTCACGTATGAT SSU05_0516 498497 - 499267 + | peptide ABC transporter permease SSU05_0517 499215 - 499745 + | peptide ABC transporter permease TERM 663 499751 - 499780 + F 100 -10.9 -5.01732 | opp_overlap 499756, overlap 499756 CTATGAATAATCTAT TGAAACGATTAGG TTTT CCTAGTCGTTTTA TTTTTTGAGCAAATT TERM 664 499756 - 499775 + F 100 -8.6 -5.42198 | opp_overlap 499756, overlap 499751 AATAATCTATTGAAA CGATTAGG TTTT CCTAGTCG TTTTATTTTTTGAGC SSU05_0518 499871 - 500935 + | coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase-like protein TERM 665 500935 - 500920 - T 76 -7.6 -4.07103 | AAAAAAAGAAGAGAA TCAGTC CCAG GACTGA TGAGATAAAAAGGAT TERM 666 501057 - 501079 + T 87 -11.4 -3.55444 | overlap 501061 ATCTTCCTCTACGGC TGAAGCGAAC GGT GTTCGCTTTA TTTCCGACCTCCAAC TERM 667 501061 - 501075 + T 91 -10 -4.42062 | overlap 501057 TCCTCTACGGCTGAA GCGAAC GGT GTTCGC TTTATTTCCGACCTC TERM 668 501119 - 501133 + T 76 -10 -2.9914 | overlap 501111 TCTGACTGTTCTGTA GCGAAC TCT GTTCGC TCTATCTCCGACCTC TERM 669 501376 - 501354 - T 100 -15 -4.74103 | opp_overlap 501354 TTTTGAATGCAAAAA CACTCTTGGA ATT TCCAAGAGTG TTTTACGTAACGGTG TERM 670 501354 - 501376 + T 100 -15 -4.18494 | opp_overlap 501354 TTTTGAATGCAAAAA CACTCTTGGA ATT TCCAAGAGTG TTTTACGTAACGGTG TERM 671 501434 - 501446 + T 76 -7.7 -4.08767 | opp_overlap 501434 CGTCGGGAGTGAGAA GGTCT GGT AGACC TTTTCAGCCAATCGC lysS 503013 - 501523 - | lysyl-tRNA synthetase TERM 672 503121 - 503104 - R 83 -6.3 -5.23316 | opp_overlap 503099 503104 TAGGATAGGAAAAAA CAGCAGA AAAT TCTACTG TTTTGCTTTATAGCT SSU05_0520 503742 - 503116 - | fructose-2,6-bisphosphatase SSU05_0521 504227 - 503745 - | hypothetical protein SSU05_0522 505081 - 504227 - | hypothetical protein TERM 673 504928 - 504914 - G 70 -2.8 -4.93079 | opp_overlap 504914 504916 504921, overlap 504916 AACAAAATAAAGAAA GTTTTC CTT GAAATC TTTTCGAATATTTGC TERM 674 505167 - 505135 - R 100 -9.9 -5.10004 | opp_overlap 505137, overlap 505137 AAAAATAATTAAAAA GACTGCCTGTTAGAT AAA ATCCAGCAGGCAGTT TTGGTTAAAGATTGT TERM 675 505137 - 505165 + r 100 -12.5 -4.41895 | opp_overlap 505135 505137 AAATAATTAAAAAGA CTGCCTGTTAGAT AAA ATCCAGCAGGCAG TTTTGGTTAAAGATT TERM 676 505165 - 505137 - R 95 -12.5 -4.12448 | opp_overlap 505137, overlap 505135 AAATAATTAAAAAGA CTGCCTGTTAGAT AAA ATCCAGCAGGCAG TTTTGGTTAAAGATT SSU05_0523 505720 - 505172 - | hypothetical protein TERM 677 505726 - 505756 + r 85 -9.8 -3.86524 | opp_overlap 505726 505728, overlap 505728 ATGTGGGCATAAAAA GACTCCTTTGTAGA TGG TCAACAAAGGAGTG TTTATAGCAGAGTAT TERM 678 505756 - 505726 - R 100 -9.8 -4.83169 | opp_overlap 505726 505728, overlap 505728 ATGTGGGCATAAAAA GACTCCTTTGTAGA TGG TCAACAAAGGAGTG TTTATAGCAGAGTAT TERM 679 505728 - 505754 + r 90 -12.4 -3.52113 | opp_overlap 505726 505728, overlap 505726 GTGGGCATAAAAAGA CTCCTTTGTAGA TGG TCAACAAAGGAG TGTTTATAGCAGAGT TERM 680 505754 - 505728 - R 93 -12.4 -4.03995 | opp_overlap 505728 505726, overlap 505726 GTGGGCATAAAAAGA CTCCTTTGTAGA TGG TCAACAAAGGAG TGTTTATAGCAGAGT SSU05_0524 506752 - 505898 - | Lyzozyme M1 (1,4-beta-N-acetylmuramidase) TERM 681 506985 - 507015 + H 75 -6.9 -4.31549 | AGTGGCTTGCTTTTT GGATTTGGCACAG TTGTT TTGTGGCAAGTCC TTATTTTGGCTTTTA SSU05_0525 507281 - 507646 + | hypothetical protein SSU05_0526 507783 - 508997 + | cell division membrane protein TERM 682 510467 - 510479 + G 76 -7.7 -4.15841 | overlap 510470 CAACATATTATTTCA CACTC GGA GAGTG TTTCTGATTTACTGG SSU05_0527 509018 - 511714 + | phosphoenolpyruvate carboxylase TERM 683 511726 - 511743 + F 93 -6.3 -5.88471 | opp_overlap 511726 TTAATAGGCATAAAA CAACTTC TTCG GAGGTTG TTTTTTTTGCTGATA SSU05_0528 511829 - 512332 + | DNA-directed RNA polymerase specialized sigma subunit SSU05_0529 512313 - 513284 + | hypothetical protein TERM 684 513498 - 513478 - f 81 -2.5 -5.67063 | overlap 513480 GGGATGATAAAAAAA GTTATAAGC GAA GCTAATAGC CCTTGCAGAAAATGG SSU05_0530 513622 - 514836 + | elongation factor Tu TERM 685 514888 - 514909 + F 100 -9.5 -4.99638 | ACAACTTAATTGTAA CTCTCTACT TTCG GGTAGAGAG TTTTTCTGTAAGTAT tpiA 515011 - 515763 + | triosephosphate isomerase TERM 686 515773 - 515795 + T 100 -11.4 -5.36314 | opp_overlap 515773 TTCTAATAACAAAAA GCATCGGATT TTG AATTCGATGC TTTTTTGATATTTTA TERM 687 515795 - 515773 - T 100 -9.2 -5.29445 | opp_overlap 515773 TTCTAATAACAAAAA GCATCGGATT TTG AATTCGATGC TTTTTTGATATTTTA SSU05_0532 516637 - 515816 - | hypothetical protein SSU05_0533 517928 - 516615 - | HD superfamily phosphohydrolase TERM 688 518127 - 518143 + G 76 -8.1 -4.0896 | opp_overlap 518122 518119 518127 CTAAAAAGCACGATA TTTCTCT AAA AGAGAAA TTTTGGACAGGATTT SSU05_0534 518027 - 518914 + | permease SSU05_0535 518926 - 519312 + | hypothetical protein TERM 689 519417 - 519379 - T 73 -9 -3.43437 | opp_overlap 519385 519412, overlap 519385 519390 GAGAAAACTGCATAA CATCAACAGAATTTAGTC TCA GACTAAGTTCTGTTTTTG ACTAAAAATGTTGAT TERM 690 519411 - 519385 - T 82 -11 -3.42013 | opp_overlap 519385, overlap 519379 519390 ACTGCATAACATCAA CAGAATTTAGTC TCA GACTAAGTTCTG TTTTTGACTAAAAAT TERM 691 519385 - 519411 + T 100 -13.2 -4.66163 | opp_overlap 519385 519379 519390 ACTGCATAACATCAA CAGAATTTAGTC TCA GACTAAGTTCTG TTTTTGACTAAAAAT SSU05_0536 520330 - 519584 - | hypothetical protein SSU05_0537 520748 - 520293 - | hypothetical protein TERM 692 520449 - 520477 + gH 73 -5.3 -4.68593 | overlap 520435 TGTTCTCGAATCTGA GAGCTTAACTTCA TAA TCAAGCTGAGCTC TTTTTGCGTAGTAGA SSU05_0538 520940 - 521848 + | adenosine deaminase TERM 693 521959 - 521991 + T 100 -10.6 -4.82154 | opp_overlap 521959 AGTATTAAGAAAAAA GCTCTATACCGGTC GATTA GACCAGTAAAGAGC TTTTTACTGTAGATT TERM 694 521991 - 521959 - T 100 -12.8 -5.52023 | opp_overlap 521959 AGTATTAAGAAAAAA GCTCTATACCGGTC GATTA GACCAGTAAAGAGC TTTTTACTGTAGATT SSU05_0539 522777 - 521995 - | hypothetical protein SSU05_0540 523501 - 522794 - | ABC-type multidrug transport system, ATPase component TERM 695 523227 - 523205 - G 71 -3.4 -5.08011 | opp_overlap 523205 523211 AAAATCTTCAAAAAA TGTAACTGCT TCG AGCACTTTCA TATGTTCATCAAGAT SSU05_0541 523874 - 523494 - | transcriptional regulator TERM 696 524837 - 524863 + G 82 -8.2 -4.38203 | opp_overlap 524832, overlap 524840 AAAGGAATTATCCAT TATTCATCAAAT GGA ATTTGATGATTA TTTCTTGATTGTATG TERM 697 524840 - 524860 + G 93 -9.9 -4.28597 | opp_overlap 524832, overlap 524837 GGAATTATCCATTAT TCATCAAAT GGA ATTTGATGA TTATTTCTTGATTGT TERM 698 526407 - 526394 - g 81 -5.3 -5.10208 | opp_overlap 526394 TAATTTCAAGAAAAA GGATT TACT AATCC CTCTTATTCAGATTG dnaE 524022 - 527132 + | DNA polymerase III DnaE SSU05_0543 527217 - 528227 + | 6-phosphofructokinase SSU05_0544 528294 - 529799 + | pyruvate kinase TERM 699 529825 - 529800 - f 83 -9.1 -4.29302 | opp_overlap 529806, overlap 529806 CGTACAGTAAAATAA TAAAAAGGTCC GCTT GGACCTTTTTG TAGTAATTAGAGAAT TERM 700 529806 - 529819 + F 95 -8.1 -4.94902 | opp_overlap 529806 529800 GTAAAATAATAAAAA GGTCC GCTT GGACC TTTTTGTAGTAATTA TERM 701 529819 - 529806 - f 100 -8.1 -5.4593 | opp_overlap 529806, overlap 529800 GTAAAATAATAAAAA GGTCC GCTT GGACC TTTTTGTAGTAATTA TERM 702 533086 - 533060 - g 74 -9.6 -3.28447 | overlap 533058 TGAGCTATCAGAATA CTGTGTTATTAG AGT CTAATAATACAG AGCGTCAGGTGTCTA SSU05_0545 529960 - 533385 + | methyl-accepting chemotaxis protein TERM 703 533632 - 533607 - T 95 -12.7 -4.13246 | opp_overlap 533601 533607 533610, overlap 533610 TATTCTAGATAGAAA TAAGCAACGAG GTTC CCCGTTGCTTA TTGTATTTATTGGTT TERM 704 533607 - 533632 + T 89 -11.3 -3.99352 | gap 1, opp_overlap 533607 533610, overlap 533601 533610 TATTCTAGATAGAAA TAAGCAACGAGG TTC CC-CGTTGCTTA TTGTATTTATTGGTT TERM 705 533629 - 533610 - T 86 -10 -4.18674 | opp_overlap 533607 533601 533610, overlap 533607 TCTAGATAGAAATAA GCAACGAG GTTC CCCGTTGC TTATTGTATTTATTG TERM 706 533610 - 533629 + T 81 -8.6 -4.09276 | gap 1, opp_overlap 533610 533607, overlap 533607 533601 TCTAGATAGAAATAA GCAACGAGG TTC CC-CGTTGC TTATTGTATTTATTG SSU05_0546 534819 - 533710 - | glycine/D-amino acid oxidases (deaminating) SSU05_0547 534904 - 535521 + | lysophospholipase L1 and related esterase SSU05_0548 535564 - 536106 + | Signal peptidase I TERM 707 536094 - 536113 + F 100 -8.6 -5.94214 | TTTTATTAAGACAGG GCTGGTTC AGTA GAATCAGC TTTTTTTATTGTATT TERM 708 536939 - 536912 - g 70 -7.2 -3.76775 | overlap 536897 GTGAATACATGGAAA TTCACGATAA GGAATTGG TTATCGTGAA AAAAGATAGTGTTGA TERM 709 537703 - 537721 + G 83 -9.6 -4.03234 | GCATTCTATATCGGT CGTGGTAG TGA CTACTACG TTTCTATGGAAGCCA SSU05_0549 536287 - 538107 + | D-fructose-6-phosphate amidotransferase TERM 710 538116 - 538132 + F 93 -6.5 -5.44119 | opp_overlap 538116 TGAATAAGAAGATAA GGTTCGG ATT TCGGACC TTTTTTTCAAATCAA SSU05_0550 538259 - 538900 + | amino acid (glutamine) ABC transporter, permease protein SSU05_0551 538910 - 539542 + | ABC-type polar amino acid transport system, ATPase component SSU05_0552 539557 - 540399 + | amino acid ABC transporter, amino acid-binding protein SSU05_0553 540414 - 540587 + | hypothetical protein TERM 711 540658 - 540646 - f 76 -7.7 -4.13767 | opp_overlap 540646 GGTGGGAGTTTAAAA GGTCT GGG AGACC TTTTAAAGTGGGAGA TERM 712 540646 - 540658 + F 76 -7.7 -4.13767 | opp_overlap 540646 GGTGGGAGTTTAAAA GGTCT GGG AGACC TTTTAAAGTGGGAGA TERM 713 540697 - 540676 - f 73 -9.5 -2.90714 | opp_overlap 540674, overlap 540679 TTAAAGTGGGAGATA TAAGCTGAC GGCA GTCAGCTCA CATAAATTGATGTCT TERM 714 540694 - 540679 - f 75 -9 -3.5947 | opp_overlap 540674, overlap 540676 AAGTGGGAGATATAA GCTGAC GGCA GTCAGC TCACATAAATTGATG TERM 715 540860 - 540884 + F 93 -6.5 -5.67063 | AAAAATTTGTATTTA GGCTACTAG TTCGTCC CTAGTAGTC TTTTTTTGTGCTAAA TERM 716 540966 - 540976 + F 75 -5.4 -4.82901 | AGTTGATGCGCAAGT GCAA TGG TTGC TTTTTGTGAGCCACG SSU05_0554 541839 - 541937 + | hypothetical protein TERM 717 542201 - 542233 + T 75 -7 -4.27465 | opp_overlap 542204, overlap 542198 542202 542204 GTAGCACGGGTAAAA AAACTGCCTAGTTC AATCA GAACTGGGCAGTAC TTATTTTACATTCTA TERM 718 542202 - 542232 + T 79 -10.5 -3.15395 | opp_overlap 542204, overlap 542201 542198 542204 TAGCACGGGTAAAAA AACTGCCTAGTTC AATCA GAACTGGGCAGTA CTTATTTTACATTCT TERM 719 542230 - 542204 - T 100 -10.9 -5.42259 | opp_overlap 542202 542201 542198 542204 GCACGGGTAAAAAAA CTGCCTAGTTC AATCA GAACTGGGCAG TACTTATTTTACATT TERM 720 542204 - 542230 + T 95 -13.1 -3.12253 | opp_overlap 542204, overlap 542202 542201 542198 GCACGGGTAAAAAAA CTGCCTAGTTC AATCA GAACTGGGCAG TACTTATTTTACATT SSU05_0555 542877 - 542239 - | Zn-dependent hydrolase, including glyoxylases TERM 721 542739 - 542750 + g 71 -2.2 -5.12617 | GGAGAATAGCCGAAA TTGG TTTT CCGA TTTTTTCGATAGTTA TERM 722 542868 - 542879 + g 71 -3 -5.01845 | GATTGACAGATTTGT GAAT AATC ATTC TTTTTCCTTCTTCTA TERM 723 544033 - 544018 - g 71 -6.8 -4.17425 | overlap 544007 544019 ACAACTACTGGAAAA CCCTGC AGAG GCAGGA TGATAATCGCCTGGT SSU05_0556 542940 - 545453 + | Rad3-related DNA helicase TERM 724 545456 - 545483 + F 78 -9.2 -3.62491 | opp_overlap 545461, overlap 545461 TTTTTTTGAATAAGT TGAAAGGGAGCC ACAA GGCTTCCTTTTG TTTCCAGCGTTTTTT TERM 725 545461 - 545478 + F 100 -9.1 -4.87133 | opp_overlap 545461, overlap 545456 TTGAATAAGTTGAAA GGGAGCC ACAA GGCTTCC TTTTGTTTCCAGCGT SSU05_0557 545613 - 546689 + | gamma-glutamyl kinase proA 546754 - 547992 + | gamma-glutamyl phosphate reductase TERM 726 548494 - 548508 + G 73 -7.1 -4.13246 | opp_overlap 548475 548484 GCAACGGCTATCGCA GGCTG CGGAC CAGCC TTTGTCTATCAGATG SSU05_0559 548002 - 548787 + | pyrroline-5-carboxylate reductase TERM 727 548797 - 548823 + T 91 -6.6 -5.30155 | opp_overlap 548802, overlap 548802 AAATAGAAGACAGCA AAAAACGGGACT TTT AATCCCGTTTTG TTTTTTCCTTGATCC TERM 728 548802 - 548818 + T 93 -6.5 -5.47846 | opp_overlap 548802, overlap 548797 GAAGACAGCAAAAAA CGGGACT TTT AATCCCG TTTTGTTTTTTCCTT TERM 729 548818 - 548802 - T 100 -8.7 -5.27399 | opp_overlap 548802 548797 GAAGACAGCAAAAAA CGGGACT TTT AATCCCG TTTTGTTTTTTCCTT SSU05_0560 549214 - 548810 - | transcriptional regulator SSU05_0561 549303 - 550193 + | hypothetical protein TERM 730 550236 - 550270 + T 86 -10.1 -4.04474 | gap 1, opp_overlap 550239, overlap 550239 ATTTCCGCTATAGAA TAATCCCCCTCG-TCT TCTA AGTTCGAGGGGGATTG TTTGTATGAGACTAT TERM 731 550239 - 550267 + T 85 -9.6 -4.14627 | gap 1, opp_overlap 550239, overlap 550236 TCCGCTATAGAATAA TCCCCCTCG-TCT TCTA AGTTCGAGGGGGA TTGTTTGTATGAGAC TERM 732 550267 - 550239 - T 83 -9.6 -3.88232 | gap 1, opp_overlap 550239 550236 TCCGCTATAGAATAA TCCCCCTCG-TCT TCTA AGTTCGAGGGGGA TTGTTTGTATGAGAC SSU05_0562 551551 - 550292 - | hypothetical protein TERM 733 551116 - 551140 + g 95 -5.7 -5.71712 | opp_overlap 551106, overlap 551106 551118 ATAGAGCTTGTTGAC TACCAGCTG TGATAAC CAGCTGGTC TTTTTTTGTATAGAC TERM 734 551118 - 551138 + g 87 -8.3 -4.50122 | opp_overlap 551106, overlap 551106 551116 AGAGCTTGTTGACTA CCAGCTG TGATAAC CAGCTGG TCTTTTTTTGTATAG SSU05_0563 551671 - 552237 + | hypothetical protein TERM 735 552713 - 552747 + G 71 -2.1 -5.1101 | opp_overlap 552720, overlap 552722 ATTATTGATGTGGCG TAAGAAAGCGCGC ATATTTACA GCGCTCTTACTTG TTTTTTCACTGGTCA SSU05_0564 552507 - 553958 + | Cps2A SSU05_0565 553976 - 554665 + | Cps2B SSU05_0566 554675 - 555370 + | Cps2C SSU05_0567 555396 - 556124 + | Cps2D TERM 736 556885 - 556903 + G 75 -6 -4.58685 | opp_overlap 556879 AAATCCAAATGCTAG GTGACCAT AGC ATCGTCAC TTTTTCCACAAATTT SSU05_0568 556149 - 557387 + | Cps2E SSU05_0569 557562 - 558731 + | Cps2F SSU05_0570 558735 - 559892 + | glycosyltransferase SSU05_0571 560206 - 561651 + | Cps2H SSU05_0572 561686 - 562918 + | Cps2I SSU05_0573 563057 - 564055 + | Cps2J TERM 737 564811 - 564822 + G 75 -2.2 -5.26119 | GTTATCGTTCATTTT TAGC CTTT GCTG TTTTGTTTTTAGGCA SSU05_0574 564048 - 565052 + | cell wall biosynthesis glycosyltransferase TERM 738 565819 - 565832 + F 70 -6.7 -4.0641 | CCTGGTTTTATGGTT GGAAG TCTA CTTCC TTTCTATGCGTCCCA SSU05_0575 566895 - 567710 + | hypothetical protein SSU05_0576 567750 - 567866 + | hypothetical protein SSU05_0577 567875 - 569281 + | O-antigen and teichoic acid export protein TERM 739 570453 - 570425 - g 74 -9.5 -3.28791 | opp_overlap 570425, overlap 570428 AGTGTTGGTTCAGAA GTACCCATCGCTG CTG CAGCAATGGGAGC TGAATTGATTGAAAA TERM 740 570450 - 570428 - g 95 -14.2 -2.82623 | opp_overlap 570425, overlap 570425 GTTGGTTCAGAAGTA CCCATCGCTG CTG CAGCAATGGG AGCTGAATTGATTGA SSU05_0578 569804 - 570820 + | sialic acid synthase SSU05_0579 570832 - 571965 + | UDP-N-acetylglucosamine 2-epimerase SSU05_0580 571955 - 572605 + | acetyltransferase TERM 741 572995 - 572983 - g 70 -7.7 -3.64103 | opp_overlap 572989 GAGTTATATGGGAAA GGTCA AGC TGACC ACGTTGTTAGCTTTA SSU05_0581 572611 - 573846 + | CMP-N-acetylneuraminic acid synthetase SSU05_0582 574028 - 574549 + | IS5 family transposase TERM 742 575028 - 575052 + F 100 -9.3 -4.93696 | opp_overlap 575033, overlap 575029 GAAAAGCTAACACCT AGAGAGGACGA AAT TCGTTCTCTCA TTTTTGATGTTTAAA TERM 743 575029 - 575051 + F 95 -12.8 -3.55133 | opp_overlap 575033, overlap 575028 AAAAGCTAACACCTA GAGAGGACGA AAT TCGTTCTCTC ATTTTTGATGTTTAA TERM 744 575218 - 575196 - g 70 -2.7 -5.0133 | overlap 575197 GATTTTCGTAAAAAA GTTCTCGCA TACTG TGAGAAAAC CGGCAGTATTACTGA SSU05_0583 575166 - 575516 + | transposase TERM 745 575986 - 575942 - g 77 -3.7 -5.21709 | gap 1, opp_overlap 575954, overlap 575944 GCTCACATCAAAAAA CACCTC-AGAAGAGTATTGC CAAATT GCGATACTTTTCTTGAGGCA CTTTCGTCCTGCTCT SSU05_0584 575534 - 576013 + | IS630-Spn1, transposase Orf2 SSU05_0585 576216 - 576503 + | transposase TERM 746 576545 - 576580 + F 85 -9.2 -4.1523 | opp_overlap 576550 576552, overlap 576550 AAAAATAAATGTTTC AAAAAGTCGTGATTTC TATT GAAATCATGGCTTTTC TTTGTGTATAATGAG TERM 747 576550 - 576575 + F 100 -9.1 -5.07523 | opp_overlap 576550 576552, overlap 576545 TAAATGTTTCAAAAA GTCGTGATTTC TATT GAAATCATGGC TTTTCTTTGTGTATA TERM 748 576575 - 576550 - f 71 -4.7 -4.60924 | opp_overlap 576550 576545, overlap 576552 TAAATGTTTCAAAAA GTCGTGATTTC TATT GAAATCATGGC TTTTCTTTGTGTATA SSU05_0586 576563 - 576826 + | hypothetical protein SSU05_0587 576906 - 577736 + | transposase SSU05_0588 577717 - 578112 + | transposase TERM 749 578146 - 578118 - f 90 -7.4 -5.20783 | opp_overlap 578118 ATGTAAATAGAAAAA GGTTCCAGAGTC AACAG GACTTTGGAGCC TTTTCAATATACCTT TERM 750 578118 - 578146 + F 91 -11.8 -4.24606 | opp_overlap 578118 ATGTAAATAGAAAAA GGTTCCAGAGTC AACAG GACTTTGGAGCC TTTTCAATATACCTT TERM 751 579054 - 579037 - g 91 -7.7 -4.81082 | opp_overlap 579037 AAGGAACCAAGAAAA CGACTCC AAAA GAAGTCG CTTTTATCGAACATT SSU05_0589 578352 - 579137 + | IS30 family transposase SSU05_0590 579331 - 579495 + | hypothetical protein SSU05_0591 580104 - 579757 - | hypothetical protein SSU05_0592 580484 - 580759 + | hypothetical protein SSU05_0593 581083 - 581184 + | hypothetical protein SSU05_0594 582008 - 581496 - | ATPase involved in DNA repair TERM 752 581591 - 581608 + g 73 -2.7 -5.23644 | opp_overlap 581593 ATTGTGATAGAAATT CAGAAAA TTCC TTTCCTG TTTTTATATTTGATT SSU05_0595 583872 - 582121 - | ATPase involved in DNA repair TERM 753 582303 - 582327 + g 100 -10.1 -4.84311 | opp_overlap 582305 582307 AATATATATTTTCAA GATATTGTGCA TTT TGCTCAATATC TTTTGTTGTATAAAA TERM 754 583012 - 583028 + g 71 -4.5 -4.74504 | opp_overlap 583011, overlap 583013 583015 TAAGATATCAATAGC TTTTTCA ATT TGAAAAG TTTTTAAATTAAAGT TERM 755 583232 - 583258 + g 81 -11 -3.31515 | overlap 583233 583236 TCCAAGTTTCCCTTT GTTAGAGGATAC AGT GTATCCTCTAAG TTATCAGAGATGTTT TERM 756 583233 - 583257 + g 100 -14.5 -2.58427 | overlap 583232 583236 CCAAGTTTCCCTTTG TTAGAGGATAC AGT GTATCCTCTAA GTTATCAGAGATGTT TERM 757 583236 - 583254 + g 83 -11.8 -2.5955 | overlap 583233 583232 AGTTTCCCTTTGTTA GAGGATAC AGT GTATCCTC TAAGTTATCAGAGAT TERM 758 583353 - 583363 + g 73 -2.6 -5.08824 | AGTTTTTTGAAAATC TAAT ATC ATTA TTTTTTAACTCCGAG TERM 759 584138 - 584121 - g 72 -6.3 -4.38116 | gap 1 CGTAGAAAAACTAAA GGGA-ACG ATT CGTGTCCC AGGTGATAAATCAAT SSU05_0596 584089 - 584394 + | 5-enolpyruvylshikimate-3-phosphate synthase TERM 760 584667 - 584657 - g 100 -4 -6.09133 | CATCGTAAAAAAAAA TTTG ACT CAAA ACCTTACAAAAAATA TERM 761 584710 - 584681 - g 75 -2.2 -5.28826 | overlap 584683 584687 AAACCTTACAAAAAA TATAATTGTCCA TTTGGG TGGACAGTTAAA ATTCAATGGCAAGGA SSU05_0597 584418 - 584912 + | 5-enolpyruvylshikimate-3-phosphate synthase SSU05_0598 584913 - 585368 + | 5-enolpyruvylshikimate-3-phosphate synthase aroK 585377 - 585868 + | shikimate kinase SSU05_0600 585859 - 586137 + | putative prephenate dehydratase TERM 762 586449 - 586433 - g 88 -6.6 -5.12617 | CAAGTAGCTAAAAAA GTCAGT CTTGC ACTGAC ATTGCCAGATAACCT SSU05_0601 586259 - 586687 + | prephenate dehydratase SSU05_0602 586699 - 588024 + | transcriptional regulator TERM 763 588044 - 588057 + F 80 -6.7 -4.77036 | opp_overlap 588041 588044 TATGGTATACTAGAA GTGAC TTCG GTCAC TTTTTAGTGGTCCAA SSU05_0603 588090 - 589448 + | SAM-dependent methyltransferase related to tRNA (uracil-5-)-methyltransferase SSU05_0604 589696 - 589514 - | hypothetical protein SSU05_0605 590008 - 590346 + | UDP-galactopyranose mutase SSU05_0606 590378 - 591121 + | UDP-galactopyranose mutase TERM 764 591223 - 591180 - T 76 -7.8 -4.09739 | gap 1, opp_overlap 591183 591186 591195, overlap 591195 GGAATGCTCTTAAAA TGTTAATCAAAAAA-ACCAGA AAT TCTGGTTTTTTTTGATTATTA TTGAATTGCGGCCAA TERM 765 591183 - 591220 + T 100 -13.9 -3.73068 | gap 1, opp_overlap 591180 591195, overlap 591186 591195 ATGCTCTTAAAATGT TAATCAAAAAA-ACCAGA AAT TCTGGTTTTTTTTGATTA TTATTGAATTGCGGC TERM 766 591186 - 591217 + T 89 -11.2 -3.99494 | gap 1, opp_overlap 591180 591195, overlap 591183 591195 CTCTTAAAATGTTAA TCAAAAAA-ACCAGA AAT TCTGGTTTTTTTTGA TTATTATTGAATTGC TERM 767 591195 - 591207 + T 100 -7.7 -6.00814 | opp_overlap 591180 591195, overlap 591186 591183 TGTTAATCAAAAAAA CCAGA AAT TCTGG TTTTTTTTGATTATT TERM 768 591207 - 591195 - T 100 -7.7 -5.63103 | opp_overlap 591195 591186 591183, overlap 591180 TGTTAATCAAAAAAA CCAGA AAT TCTGG TTTTTTTTGATTATT SSU05_0607 591825 - 591574 - | flavoprotein SSU05_0608 592277 - 591828 - | transcriptional regulator TERM 769 592137 - 592163 + g 75 -2.2 -5.4148 | opp_overlap 592143 592147, overlap 592139 GAGTGCCTCCATCAC TCCAAACTGACA AAC TGTCAGTCCGTA TTTTTTGATTGTTTC TERM 770 592157 - 592143 - G 73 -8.6 -3.62096 | opp_overlap 592139 592137, overlap 592147 CTCCATCACTCCAAA CTGACA AAC TGTCAG TCCGTATTTTTTGAT TERM 771 592487 - 592517 + H 80 -6.3 -5.04733 | overlap 592489 GAATGTAGGTTTTTA TATCCTTTTCTTT GTGTG AAGGAAAAGGAAA TTTTATTTATAGTTA SSU05_0609 592748 - 592921 + | transposase SSU05_0610 592939 - 593196 + | transposase TERM 772 593392 - 593348 - g 77 -3.7 -5.21709 | gap 1, opp_overlap 593360, overlap 593350 GCTCACATCAAAAAA CACCTC-AGAAGAGTATTGC CAAATT GCGATACTTTTCTTGAGGCA CTTTCGTCCTGCTCT SSU05_0611 593213 - 593419 + | transposase SSU05_0612 593478 - 593975 + | hypothetical protein SSU05_0613 593972 - 595153 + | aspartate aminotransferase TERM 773 595351 - 595329 - g 83 -9.2 -4.05788 | TGCCTTCAAACCAAA CTTCATCGAA AAA TTCGGTGAAG AAGCTGGTACTGAGA asnC 595168 - 596694 + | asparaginyl-tRNA synthetase SSU05_0615 596757 - 596942 + | hypothetical protein SSU05_0616 596980 - 597114 + | hypothetical protein SSU05_0617 597324 - 597467 + | hypothetical protein SSU05_0618 597646 - 598977 + | Na+-driven multidrug efflux pump SSU05_0619 599028 - 599405 + | YjgF family translation initiation inhibitor SSU05_0620 599427 - 600314 + | hypothetical protein SSU05_0621 600311 - 601285 + | hypothetical protein SSU05_0622 601282 - 602199 + | hypothetical protein TERM 774 602331 - 602348 + F 100 -7.7 -5.50925 | opp_overlap 602331 602329 TCGACGATACTAAGA CTGGTTC GAGA GGACCAG TTTTTTGTATTAGTT TERM 775 602383 - 602396 + F 78 -6.7 -4.56887 | opp_overlap 602373 TAGTATTCCTCTTCA CAGGA ATGA TCCTG TTTTATGAATTTTTC SSU05_0623 602482 - 603180 + | cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases TERM 776 603167 - 603188 + F 90 -7.4 -5.24129 | overlap 603183 TCTTAGAAAATTTGA CAGAAACT CATTGA AGTTTCTG TTTTTTATAAAAAAA TERM 777 604330 - 604316 - g 73 -10 -2.954 | opp_overlap 604311 604316, overlap 604315 TATCCACCCAGAAAT CGAAGG TGA CCTTCG TGTCTTCTCTGTAAC TERM 778 604316 - 604330 + G 76 -10 -3.25316 | opp_overlap 604316 604315, overlap 604311 TATCCACCCAGAAAT CGAAGG TGA CCTTCG TGTCTTCTCTGTAAC SSU05_0624 603372 - 604670 + | arginine deiminase SSU05_0625 604670 - 605110 + | histone acetyltransferase HPA2-like acetyltransferase TERM 779 605939 - 605912 - g 77 -5 -5.03145 | gap 1, overlap 605915 GAATTGGTGAAAAAA GC-AGAAAATGAA AAT CTCATCTTCTTGC ACTGCTTGCCTGCCT SSU05_0626 605129 - 606142 + | ornithine carbamoyltransferase TERM 780 606176 - 606196 + F 100 -18.3 -4.18506 | opp_overlap 606165 CGCATCGCAACCTCC GGGGGCTGG CAC CCAGCCCCC TTATTTTGAGGATAG TERM 781 606292 - 606302 + G 76 -6.8 -4.46212 | overlap 606284 TGTAGTAGCCTTGGG TGGC AAT GCCA TTTTATCGTCCGACC TERM 782 606588 - 606578 - g 73 -5.4 -4.68424 | opp_overlap 606576 606578 GAAGGCATTGAAAAA GATG TAG CATC TGTTGTGACCCAGGT SSU05_0627 606212 - 607207 + | carbamate kinase SSU05_0628 607550 - 609052 + | hypothetical protein TERM 783 609061 - 609103 + G 100 -8.7 -5.1417 | opp_overlap 609060, overlap 609060 CTTCTAATCGAAATT CTGGGTCAGATTTTATC ACGAATACA GATAAAATTTGGCTCAG TTTTTCCTTTTATGA SSU05_0629 609036 - 610511 + | hypothetical protein TERM 784 610549 - 610572 + F 71 -4.6 -4.77165 | opp_overlap 610549, overlap 610544 AATTACAGTTTAAAA GCTCTTAG TGAAATAT CTAAGGGC TTTTCTTATGAAGAA TERM 785 611314 - 611303 - g 73 -5.8 -4.41348 | TTGCTGGTAAAGAAA CTGG CGAA CCAG ATAACGGTTACTCCA TERM 786 611765 - 611752 - g 81 -5.3 -5.22039 | GCTAAATTGAAAAAA CCATA TTTC TATGG TAAGGCTCCAACTAA TERM 787 612073 - 612045 - g 75 -9 -3.67843 | TAAAACTCCGAAGAA CTCTAAAGCG CGTTATGTT CGCTTTAGAG GTACGCGCGTAGATG TERM 788 612610 - 612594 - g 71 -6.6 -4.08394 | ATACCTTGGTCAAAA TCCATG GTATG CATGGA CAACTAACCATTTTG SSU05_0630 610882 - 615141 + | N-acetyl-beta-hexosaminidase TERM 789 615309 - 615347 + T 93 -13.4 -2.96722 | opp_overlap 615314, overlap 615314 TTTTTATCGGCTACT AAAAATCCCCCGTAATAA ATC TTATTACGGGAGATTTTC GTTTATGAGTATAAA TERM 790 615342 - 615314 - T 100 -15.5 -4.7254 | opp_overlap 615314 615309 ATCGGCTACTAAAAA TCCCCCGTAATAA ATC TTATTACGGGAGA TTTTCGTTTATGAGT TERM 791 615314 - 615342 + T 100 -13.3 -4.62475 | opp_overlap 615314, overlap 615309 ATCGGCTACTAAAAA TCCCCCGTAATAA ATC TTATTACGGGAGA TTTTCGTTTATGAGT TERM 792 615415 - 615428 + T 72 -3.9 -5.05228 | AAATTAAGTATGTTG TTTGT GAAC ACAAA TTTTTATAATTTACT SSU05_0631 615917 - 615432 - | arginine repressor SSU05_0632 616988 - 615954 - | S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) SSU05_0633 617164 - 616997 - | hypothetical protein TERM 793 617316 - 617271 - H 83 -7.1 -4.84017 | opp_overlap 617272, overlap 617304 AATTCTTGACAAAAA TTGGTCTATACCATATAAT AAAGAAAA ACAAAATGGTATAGACCAA AGAGGTGTGTTATGA TERM 794 617315 - 617304 - H 84 -4.4 -5.48028 | overlap 617271 TAAAGAAAAACAAAA TGGT ATAG ACCA AAGAGGTGTGTTATG SSU05_0634 617328 - 618032 + | 6-phosphogluconolactonase/glucosamine-6-phosphate isomerase/deaminase TERM 795 619002 - 619021 + F 90 -10.8 -4.21787 | ACTCGAATTAGTATG CCCTCTAT GAAA ATAGAGGG TTTTAAACATTTTTT TERM 796 619733 - 619752 + F 90 -8.6 -4.5366 | ACTCAAAATAGTATG CCCTCTGT GAAA ATAGAGGG TTTTAAATTTTTTAG SSU05_0635 619943 - 620323 + | hypothetical protein SSU05_0637 620761 - 620660 - | hypothetical protein SSU05_0636 620433 - 620777 + | hypothetical protein TERM 797 621007 - 621030 + FH 73 -3.2 -5.1167 | overlap 621001 ATTAAAGAGTGAAAA GTTTAGGATG TAAT TGTTCTAAAC TTTTTATATTGCATT TERM 798 621279 - 621293 + FH 100 -7.2 -5.86465 | TGTACGATTTATCTG TAGAAC CCT GTTCTA TTTTTTTATATTGTT SSU05_0638 621341 - 622927 + | D-alanine--D-alanyl carrier protein ligase SSU05_0639 622924 - 624165 + | D-alanine export protein SSU05_0640 624208 - 624447 + | D-alanine--poly(phosphoribitol) ligase subunit 2 SSU05_0641 624440 - 625705 + | hypothetical protein TERM 799 625760 - 625728 - T 76 -4.2 -5.20333 | opp_overlap 625728 CAGTTATAATAAAAA GCAAGAAGGCTT TGAATTAGG AAGTCTCCTTGC TTTTTTGTTCTTTTA TERM 800 625728 - 625760 + T 88 -4.9 -5.77677 | opp_overlap 625728 CAGTTATAATAAAAA GCAAGAAGGCTTT GAATTAG GAAGTCTCCTTGC TTTTTTGTTCTTTTA SSU05_0642 626909 - 625794 - | putative low temperature requirement A protein SSU05_0643 627938 - 626982 - | glutathione S-transferase TERM 801 627994 - 627963 - H 76 -4.5 -5.08824 | opp_overlap 627965 627970, overlap 627964 627965 CCCTTACTGAAAAAA TGGGAAATCCAAT AGGATG ATTGGATTTCCTT TGTAAAAAAATATAT TERM 802 627993 - 627964 - H 72 -8 -3.64812 | opp_overlap 627965 627970, overlap 627963 627965 CCTTACTGAAAAAAT GGGAAATCCAAT AGGATG ATTGGATTTCCT TTGTAAAAAAATATA TERM 803 627965 - 627992 + H 91 -11.5 -3.86524 | opp_overlap 627964 627963 627965, overlap 627970 CTTACTGAAAAAATG GGAAATCCAAT AGGATG ATTGGATTTCC TTTGTAAAAAAATAT TERM 804 627992 - 627965 - H 82 -11.5 -2.78405 | opp_overlap 627965 627970, overlap 627964 627963 CTTACTGAAAAAATG GGAAATCCAAT AGGATG ATTGGATTTCC TTTGTAAAAAAATAT SSU05_0644 628077 - 628793 + | 16S rRNA uridine-516 pseudouridylate synthase family protein TERM 805 629166 - 629146 - gT 82 -3.3 -5.47159 | CTTAAGAAAGAAAAA TCAACCT TATTAGG AGGTCGA ATTGAGTGGAATTTT SSU05_0645 628759 - 629286 + | glutathione peroxidase TERM 806 629319 - 629284 - T 100 -12 -4.87665 | opp_overlap 629287 629290, overlap 629287 CTTTACCTAGAAAAA TAACAAGAAGGCTGGA GTCA TCTAGCCTTCTTGTTT TAGTAACCACAGAAA TERM 807 629287 - 629316 + T 100 -15.9 -4.25104 | opp_overlap 629284 629287, overlap 629290 TACCTAGAAAAATAA CAAGAAGGCTGGA GTCA TCTAGCCTTCTTG TTTTAGTAACCACAG TERM 808 629316 - 629287 - T 100 -13.7 -4.5448 | opp_overlap 629287 629290, overlap 629284 TACCTAGAAAAATAA CAAGAAGGCTGGA GTCA TCTAGCCTTCTTG TTTTAGTAACCACAG TERM 809 629290 - 629313 + T 91 -11.8 -4.25256 | opp_overlap 629287 629284, overlap 629287 CTAGAAAAATAACAA GAAGGCTGGA GTCA TCTAGCCTTC TTGTTTTAGTAACCA SSU05_0646 630306 - 629305 - | ABC-type Fe3+-siderophore transport system, permease component SSU05_0647 631379 - 630303 - | ABC-type Fe3+-siderophore transport system, permease component TERM 810 631293 - 631271 - GR 88 -4.9 -5.56568 | opp_overlap 631274, overlap 631274 AGATGATGAAAAAAA CAAGCCAAA TATTC TTTGGCTTT GTTTTGGGATAACGA TERM 811 631274 - 631290 + gr 79 -6.6 -4.67048 | opp_overlap 631274 631271 TGATGAAAAAAACAA GCCAAA TATTC TTTGGC TTTGTTTTGGGATAA TERM 812 631290 - 631274 - GR 82 -6.6 -4.8487 | opp_overlap 631274, overlap 631271 TGATGAAAAAAACAA GCCAAA TATTC TTTGGC TTTGTTTTGGGATAA SSU05_0649 632172 - 631342 - | ABC-type Fe3+-hydroxamate transport system, periplasmic component TERM 813 631493 - 631506 + gH 80 -4.5 -5.22137 | opp_overlap 631481 TCACTTTCTTTGAGA GAGGC AGCT GCTTC TTTTGTTTTATCATT SSU05_0648 632153 - 632302 + | hypothetical protein SSU05_0650 632883 - 632284 - | ABC-type cobalamin/Fe3+-siderophores transport system, ATPase component TERM 814 633215 - 633194 - R 100 -11.7 -5.25803 | opp_overlap 633192 AATCGTTATAAAAAA GTCCTTGTT TGTG AACAAGGAC CGTATGTTACAAATA murE 634667 - 633222 - | UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase TERM 815 634374 - 634388 + g 71 -10 -2.57468 | opp_overlap 634376, overlap 634373 634369 634376 AAATTCCATGGCAAT CAGGCT CAT AGCCTG CTTGATGTCGTGGAC TERM 816 634463 - 634453 - G 71 -4.6 -4.72846 | TCAGACACGTAAAAA GCCA GTC CGGC CTCGATAGCTTTTTC TERM 817 634613 - 634632 + g 74 -9.2 -3.27121 | overlap 634606 CATTCTGTTTGATAT GGCGGAAG TTAG CATCCGCC TTCAATATTTCTAAT SSU05_0652 634798 - 635565 + | 1-acyl-sn-glycerol-3-phosphate acyltransferase TERM 818 635572 - 635586 + F 100 -7.8 -5.72118 | opp_overlap 635572 AATAAGTAAATGAAA CTCGCA GCT TGCGGG TTTTTTGTATTTTTT TERM 819 635687 - 635702 + GF 79 -10.4 -3.21099 | opp_overlap 635673 635672 635681 GTGGCAAATTGCTCT GCCAGC AGTG GCTGGC TTGCTAATGGCGACG SSU05_0653 635628 - 636290 + | DNA uptake protein and related DNA-binding proteins SSU05_0654 636229 - 638511 + | membrane metal-binding protein SSU05_0655 638836 - 639204 + | hypothetical protein SSU05_0656 639214 - 639495 + | CBS domain-containing protein TERM 820 639514 - 639499 - f 71 -4.6 -4.81752 | opp_overlap 639500, overlap 639500 AAAAATATTTAAAAA CCCGAG ATTT CTCGGT TTTTTTCTTTAGCTA TERM 821 639513 - 639500 - f 70 -8.1 -3.46611 | opp_overlap 639500, overlap 639499 AAAATATTTAAAAAC CCGAG ATTT CTCGG TTTTTTTCTTTAGCT TERM 822 639500 - 639513 + F 100 -8.1 -5.96894 | opp_overlap 639499 639500 AAAATATTTAAAAAC CCGAG ATTT CTCGG TTTTTTTCTTTAGCT SSU05_0657 639590 - 640417 + | hypothetical protein TERM 823 640818 - 640806 - g 74 -6.3 -4.5442 | TGCTGAATTAGAAAA GAAAC CTG GTTTC TTCCAACACCTGTTC SSU05_0658 640423 - 641694 + | hypothetical protein TERM 824 641725 - 641702 - T 100 -11.8 -4.80656 | opp_overlap 641702 ATCAATAATATAAAA CCTGCAGTTC AGCG AAACTGCAGG TTTGTTTAATGGCGT TERM 825 641702 - 641725 + T 95 -11.1 -4.49958 | opp_overlap 641702 ATCAATAATATAAAA CCTGCAGTT CAGCGA AACTGCAGG TTTGTTTAATGGCGT SSU05_0659 642069 - 641731 - | hypothetical protein SSU05_0660 642667 - 642176 - | hypothetical protein SSU05_0661 642743 - 643411 + | thymidylate kinase TERM 826 643582 - 643570 - g 74 -7.7 -3.96148 | opp_overlap 643570 643569 TTTTGTCAGGAGAAA GAAGG CAT CCTTC CTTGTCAGAAGTGTC SSU05_0662 643408 - 644292 + | DNA polymerase III subunit delta' SSU05_0663 644312 - 644629 + | DNA replication intiation control protein YabA SSU05_0664 644631 - 645494 + | methyltransferase TERM 827 645486 - 645501 + F 100 -7.6 -5.82281 | GATATATATCATGGA CTAGGT TAAG ACCTAG TTTTTTTGTATGTTT TERM 828 645983 - 645997 + G 73 -10 -3.01712 | CAATCTACAACTTCT CTGCAG GTC CTGCAG TATTGCCAAAACCAG TERM 829 646286 - 646273 - g 73 -3.8 -5.02074 | TCATGGGGTAAAAAA GCCT ATACTG AGGC TGTGAAGCTGTCTAA TERM 830 646492 - 646529 + G 76 -7.9 -4.18094 | gap 1, opp_overlap 646500 GTCATTGCTGATATG TCTTCAAACATCTTAGCG GCT CGCTATAATGTT-GAAGA TTTTGCCATGATTTA SSU05_0665 645964 - 647055 + | phosphoserine aminotransferase SSU05_0666 647055 - 647612 + | histone acetyltransferase HPA2-like acetyltransferase TERM 831 647653 - 647626 - f 83 -7 -4.82091 | opp_overlap 647631, overlap 647631 AATGAAATAAAGAAA GAAAAGGCGGCA GCTA TTCCGCCTTTTT AGGTAAAAATAAATG TERM 832 647631 - 647648 + F 81 -6.9 -4.66163 | opp_overlap 647631 647626 AATAAAGAAAGAAAA GGCGGCA GCTA TTCCGCC TTTTTAGGTAAAAAT TERM 833 647648 - 647631 - f 90 -6.9 -5.24515 | opp_overlap 647631, overlap 647626 AATAAAGAAAGAAAA GGCGGCA GCTA TTCCGCC TTTTTAGGTAAAAAT SSU05_0667 647666 - 648847 + | phosphoglycerate dehydrogenase and related dehydrogenase TERM 834 649155 - 649171 + G 78 -10.1 -3.47322 | opp_overlap 649154 TACCTATGGACAACT GGCTCAG CAA CTGGGCC TTCGTTCTGGTCAGG SSU05_0668 648850 - 649356 + | methylated DNA-protein cysteine methyltransferase SSU05_0669 649340 - 649693 + | arsenate reductase TERM 835 649676 - 649705 + T 83 -8.7 -4.35885 | opp_overlap 649673 649676 649681, overlap 649681 TATCGAACAAAATAC GAAAATCTCGGTT TATA AGCCGAGATTTTG TTTATTATAGTGCAT TERM 836 649681 - 649700 + T 100 -8.6 -5.14682 | opp_overlap 649676 649673 649681, overlap 649676 AACAAAATACGAAAA TCTCGGTT TATA AGCCGAGA TTTTGTTTATTATAG TERM 837 649700 - 649681 - T 78 -6.4 -4.59591 | opp_overlap 649681 649676, overlap 649676 649673 AACAAAATACGAAAA TCTCGGTT TATA AGCCGAGA TTTTGTTTATTATAG SSU05_0670 650609 - 649710 - | Co/Zn/Cd cation transporter TERM 838 650753 - 650707 - R 83 -9 -4.34488 | opp_overlap 650706 650711, overlap 650711 TAGAGTGATAAGAAA TAAAGGCTCAAAACCCTT GCAATAGATCT ACGGGTTTTAAGCCTTTA ATATCTGTTATCTGA TERM 839 650749 - 650711 - R 75 -5.4 -4.73677 | opp_overlap 650711 650706, overlap 650707 GTGATAAGAAATAAA GGCTCAAAACCCTT GCAATAGATCT ACGGGTTTTAAGCC TTTAATATCTGTTAT SSU05_0671 651302 - 650796 - | exonuclease III SSU05_0672 651625 - 651398 - | putative 3'-exo-deoxyribonuclease SSU05_0674 652023 - 651862 - | hypothetical protein TERM 840 653007 - 652996 - gH 78 -5.8 -4.74801 | GAAGTGCAGGAAAAA GGCT ATAA AGCC ACTAATCCAAGCCTA SSU05_0673 651781 - 653442 + | hypothetical protein TERM 841 654593 - 654608 + G 70 -7.6 -3.72893 | CGAGAATGGTCTATT CCATCA GTCG TGATGG TTTGCTACCGAAATC SSU05_0675 653602 - 654990 + | amino acid transporter TERM 842 654997 - 655018 + F 89 -5.9 -5.28826 | opp_overlap 654996 GCAAAATAATAGATT TCCCTTC TTTTATTT GAAGGGA TTTTTTGTACAATTT TERM 843 655209 - 655228 + G 70 -7.2 -3.75153 | CTGTTTTGATTTCTT TTCTGTCA GGAG TGGCAGAA TTTGGCTTGAAACAA SSU05_0676 655085 - 655777 + | integral membrane protein TERM 844 656026 - 656046 + F 73 -5.4 -4.60746 | opp_overlap 656026 ACAAATTATTAGGAA TCCCTTCG TATTT TGGAGGGA TTTTCCTGTTTTTAA SSU05_0677 656186 - 657025 + | integral membrane protein TERM 845 657038 - 657002 - T 100 -8.9 -5.30575 | opp_overlap 657006, overlap 657006 GAAAAATTGAAAAAA CAAAGACTGTCAGCT GTAGAGT AGCTAACAGTCTTTT ATGATTATAGGGAGC TERM 846 657006 - 657034 + T 90 -8.9 -4.58466 | opp_overlap 657002 657006 AATTGAAAAAACAAA GACTGTCAGCTGT AGA GTAGCTAACAGTC TTTTATGATTATAGG TERM 847 657034 - 657006 - T 100 -9.7 -5.08015 | opp_overlap 657006, overlap 657002 AATTGAAAAAACAAA GACTGTCAGCT GTAGAGT AGCTAACAGTC TTTTATGATTATAGG SSU05_0678 657603 - 657043 - | metal-dependent membrane protease TERM 848 657366 - 657383 + g 77 -8.5 -4.07568 | opp_overlap 657364 TGATTAAAAAACCTT TTTTCCC GGGG GGGAAAA TTTTAAAAAAAAGGG TERM 849 657411 - 657421 + g 100 -6.8 -6.58542 | opp_overlap 657409 657411 GGGAAAAAACAATGA TCCC CAT GGGA TTTTTTTTTTTACCA TERM 850 657672 - 657682 + H 84 -4.6 -5.58209 | TAAAAAAACCAATTC CTCC CCC GGGG TTTTTTTCAATTTCC SSU05_0679 658041 - 658652 + | hypothetical protein TERM 851 658745 - 658726 - T 100 -7.9 -5.42862 | ACAGGTTCAAAAAAA TCCACAG TAAAAC CTGTGGA AAATATGGTAGAATA TERM 852 659027 - 659041 + T 77 -10 -3.2614 | ACCATTACGACTGAT GCGAAC AGA GTTCGC TTCATCTCCAACCTC TERM 853 659074 - 659060 - T 78 -8.6 -3.66356 | opp_overlap 659060 ATCTCCAACCTCAAA CTGTCT CCC AGACAG TTTGAGCTGTGCGGG TERM 854 659060 - 659074 + T 75 -8.6 -3.63627 | opp_overlap 659060 ATCTCCAACCTCAAA CTGTCT CCC AGACAG TTTGAGCTGTGCGGG SSU05_0680 659591 - 659400 - | hypothetical protein TERM 855 659466 - 659494 + g 73 -9.7 -3.00946 | opp_overlap 659465 659473, overlap 659465 659473 TCCCGTCTTTAAAAT GTTCAAACAGTCT GGG AGACTGTTTGAGG TCGTTTCTCGAAAAC TERM 856 659473 - 659487 + g 73 -8.6 -3.65754 | opp_overlap 659465 659473, overlap 659466 659465 TTTAAAATGTTCAAA CAGTCT GGG AGACTG TTTGAGGTCGTTTCT TERM 857 659487 - 659473 - G 73 -8.6 -3.66666 | opp_overlap 659473 659466 659465, overlap 659465 TTTAAAATGTTCAAA CAGTCT GGG AGACTG TTTGAGGTCGTTTCT TERM 858 659526 - 659549 + g 100 -11.8 -4.09511 | opp_overlap 659524 659520 GAAGAAAACGATACT GGGATTGAGT TGGC GCTCAATCCC TTTTCCAAAACTATT SSU05_0681 659949 - 659608 - | hypothetical protein SSU05_0682 660014 - 660418 + | hypothetical protein SSU05_0683 660393 - 661682 + | putative modification enzyme of type III restriction-modification system TERM 859 662682 - 662694 + G 71 -4.8 -4.58395 | overlap 662675 ACCAAATTGGTTGAA GAGC CTTTT GCTC TTTTTGAAGAGTCAG TERM 860 663400 - 663384 - g 84 -5.1 -5.26155 | overlap 663394 ACAGAAACAGAAAAA CGACAAA AGA TTGGTCG TGGGATGCGTCTAGC SSU05_0684 661686 - 664784 + | type III restriction-modification system, restriction endonuclease subunit SSU05_0685 665041 - 665394 + | IS200 family transposase TERM 861 665422 - 665392 - T 83 -9.2 -3.97694 | opp_overlap 665400, overlap 665396 665400 AAATATATACAAGAA TAAAGAAATTATCC AGT GGATGATTTCTTCA CGAGCTTCAGCTTAA TERM 862 665418 - 665396 - T 84 -7.8 -4.55997 | opp_overlap 665400, overlap 665392 665400 ATATACAAGAATAAA GAAATTATCC AGT GGATGATTTC TTCACGAGCTTCAGC TERM 863 665541 - 665527 - T 73 -10 -2.54687 | overlap 665526 GCAAGTAGTACGAAT GCCTCT TTA AGAGGC TAGTGACGAGTCAAA TERM 864 665604 - 665583 - T 91 -11.5 -3.93262 | opp_overlap 665580 TTGAACAAAGTGAAA GCCAGCGTC TTTA GGCGCTGGC TGGTGATGTGGGCTT TERM 865 665614 - 665626 + T 75 -9.1 -3.61398 | GCTGGCTGGTGATGT GGGCT TAT AGCCC TTGTTCAAACCACCC TERM 866 665629 - 665661 + T 100 -23.7 -4.19307 | opp_overlap 665636 GGGCTTATAGCCCTT GTTCAAACCACCCGT TTG ACGGGTGGTTTGAAC TTTCTAATTTATGTG TERM 867 665654 - 665636 - T 100 -14.6 -3.53224 | opp_overlap 665629 TAGCCCTTGTTCAAA CCACCCGT TTG ACGGGTGG TTTGAACTTTCTAAT SSU05_0686 667399 - 665681 - | phosphomannomutase TERM 868 667292 - 667303 + g 85 -4.4 -5.45813 | TTCAAGATTTGTATA GAAG GCAT CTTC TTTTGTTTTTTCATC SSU05_0687 668062 - 667490 - | hypothetical protein SSU05_0688 668594 - 668046 - | phosphopantothenoylcysteine decarboxylase SSU05_0689 669288 - 668587 - | phosphopantothenate--cysteine ligase SSU05_0690 669684 - 671354 + | formate--tetrahydrofolate ligase TERM 869 671367 - 671396 + T 79 -10.9 -3.09557 | opp_overlap 671367 671374, overlap 671374 TAACAAGAATGAATA TAAAAAATCCGCT CAAA GGCGGATTTTTTG TCTATTCAGATAGTT TERM 870 671389 - 671374 - T 91 -6.1 -5.50925 | opp_overlap 671367 671374, overlap 671367 AATGAATATAAAAAA TCCGC TCAAAG GCGGA TTTTTTGTCTATTCA TERM 871 671374 - 671389 + T 93 -6.8 -5.47431 | opp_overlap 671374 671367, overlap 671367 AATGAATATAAAAAA TCCGCT CAAA GGCGGA TTTTTTGTCTATTCA SSU05_0691 672285 - 671398 - | hypothetical protein SSU05_0692 672422 - 673738 + | pyridine nucleotide-disulfide oxidoreductase TERM 872 673750 - 673765 + F 100 -8.2 -5.28176 | opp_overlap 673750 TTAATAGTGTAATAA CCGTCC AATA GGGCGG TTTTTTGTCGGTCAG SSU05_0693 673831 - 676884 + | putative HsdR SSU05_0694 676868 - 677854 + | putative HsdM SSU05_0695 677631 - 678530 + | putative HsdM SSU05_0696 678523 - 679782 + | putative HsdS SSU05_0697 679734 - 680024 + | hypothetical protein SSU05_0698 680005 - 680667 + | hypothetical protein TERM 873 680724 - 680696 - T 100 -16.9 -4.39828 | opp_overlap 680696 AATACTTTCAGAAAA TACCCCCTAATCA TGT TGACTAGGGGGTA TTTTTCTAAGTCGTT TERM 874 680696 - 680724 + T 100 -14.7 -4.89339 | opp_overlap 680696 AATACTTTCAGAAAA TACCCCCTAATCA TGT TGACTAGGGGGTA TTTTTCTAAGTCGTT SSU05_0699 681506 - 680730 - | hypothetical protein TERM 875 681211 - 681228 + g 73 -5.5 -4.60924 | overlap 681213 TGATAGGCTTGTAAT TTCTCGG GTGT CCGAGTA TTTTTAAAAAGTTTG TERM 876 681213 - 681226 + g 74 -8.1 -3.91164 | overlap 681211 ATAGGCTTGTAATTT CTCGG GTGT CCGAG TATTTTTAAAAAGTT TERM 877 681891 - 681876 - g 85 -4 -5.52096 | gap 1, opp_overlap 681877 681879, overlap 681877 681879 AAATGGAATAAAAAA CTAGCAC TTA GTGCT-G TCTTAGTCGCAAGTT SSU05_0700 681858 - 682475 + | PilT family ATPase SSU05_0701 682476 - 682985 + | sortase and related acyltransferase SSU05_0702 682975 - 683286 + | DNA alkylation repair protein SSU05_0703 683332 - 683628 + | DNA alkylation repair protein TERM 878 683689 - 683662 - g 70 -7.8 -3.67976 | opp_overlap 683681 683682 683684, overlap 683687 TCTATGAATTTGAAA CCCTTATCCA TCCAGTAC CGGATAAGGG CGGAGCCTATATCAT SSU05_0704 683637 - 683924 + | hypothetical protein TERM 879 684244 - 684262 + T 100 -11.7 -5.00895 | GGAAACGATGCCCTT GCCCACC TTTAT GGTGGGC TTTTTGTATACTAAG TERM 880 684406 - 684384 - T 75 -10 -2.84732 | opp_overlap 684381, overlap 684387 GTTAAAGGTAGGAGA TAAGATTTGC GAA GCAAATCTCA GCAATTCGTGTTTTA TERM 881 684403 - 684387 - T 78 -9.5 -3.56562 | opp_overlap 684381, overlap 684384 AAAGGTAGGAGATAA GATTTGC GAA GCAAATC TCAGCAATTCGTGTT SSU05_0705 685402 - 684626 - | pyruvate-formate lyase-activating enzyme SSU05_0706 685534 - 686277 + | sugar metabolism transcriptional regulator SSU05_0707 686290 - 686445 + | transcriptional regulator SSU05_0708 686592 - 687263 + | transcriptional regulator TERM 882 687269 - 687298 + F 100 -10.9 -5.24129 | opp_overlap 687268 687271 AAATTTGTAAGAGAG TACTTCAATCACT TAAA GGTGGTTGAAGTA TTTTTTATCCCAAAA TERM 883 687329 - 687316 - f 82 -6.7 -5.0538 | TTTTATCCCAAAAAA TGCAC AAAA GTGCA GAAATAAATTAAAAC SSU05_0709 687451 - 687774 + | phosphotransferase system cellobiose-specific component IIA SSU05_0710 687807 - 688112 + | phosphotransferase system cellobiose-specific component IIB SSU05_0711 688119 - 688574 + | phosphotransferase system cellobiose-specific component IIC SSU05_0712 688568 - 688759 + | phosphotransferase system cellobiose-specific component IIC TERM 884 689025 - 689035 + G 70 -5.4 -4.42748 | overlap 689033 GTCAGGTTCAGGTAT TACC TTC GGTA TTGTTTTTGCAATGC TERM 885 689278 - 689294 + G 70 -5.1 -4.4767 | CTACCATGGTCTACC CCAGCAA TCA TTTCTGG TTTTATGGTGGGTGG SSU05_0713 688756 - 689427 + | phosphotransferase system cellobiose-specific component IIC TERM 886 691282 - 691294 + G 76 -7.7 -4.16259 | TTTCTGGTCTGCAGG TTGGC ATT GCCAA TTTATCTGATTCTCT SSU05_0714 689580 - 692024 + | pyruvate-formate lyase TERM 887 692652 - 692624 - g 75 -10.4 -2.75039 | GATATATTTGAAGCA GCCTTTTCTATG CCATC CATTGAAAAGGC GGTAAATGATTTTGC SSU05_0715 692039 - 692707 + | fructose-6-phosphate aldolase TERM 888 693292 - 693269 - g 77 -6.2 -4.63526 | gap 1, opp_overlap 693269 693267, overlap 693290 AGAAGTACAAAGAAA TCATCTATTCA GCT TGA-TAGATGA TATTCTTATCAGAGA SSU05_0716 692739 - 693695 + | glycerol dehydrogenase and related enzyme gldA 693816 - 694910 + | glycerol dehydrogenase TERM 889 694971 - 694995 + F 95 -11.5 -4.54727 | opp_overlap 694970 AGGTTCGAAGTAATT GCCTTGGGAAA TTC TTTCTCAGGGC TTTTCATTTGAAAAA SSU05_0718 695079 - 696155 + | aspartate-semialdehyde dehydrogenase TERM 890 696181 - 696194 + F 95 -8.1 -5.00884 | opp_overlap 696176 696181 CAAAAGTACACAAAA GGCTG CACT CAGCC TTTTTTAGCAACAAT TERM 891 696194 - 696181 - f 88 -8.1 -4.6709 | opp_overlap 696181, overlap 696176 CAAAAGTACACAAAA GGCTG CACT CAGCC TTTTTTAGCAACAAT TERM 892 696342 - 696360 + G 71 -4.5 -4.63218 | ATTGAACATCTGTTG TCCCATC ACACA GAAGGGA TTTTATTAGCAGGAA TERM 893 696589 - 696576 - g 79 -8.1 -4.35483 | CCTTACTACAACAAA CCCTC TCAA GAGGG AATGTATCAGCACTT SSU05_0719 696228 - 697163 + | dihydrodipicolinate synthase TERM 894 697236 - 697250 + F 75 -8.6 -3.62096 | opp_overlap 697236 TCTGGGGGAGTGAAA CAGTTC GGG GAACTG TTTCAGCTGGTCACC TERM 895 697250 - 697236 - f 78 -8.6 -3.64703 | opp_overlap 697236 TCTGGGGGAGTGAAA CAGTTC GGG GAACTG TTTCAGCTGGTCACC TERM 896 697438 - 697459 + F 90 -10.9 -4.27316 | opp_overlap 697438 TTTAAGTTTACACAA GCACATCAG TTAT CTGGTGTGC TTTTCAGTTGCAAGC TERM 897 697459 - 697438 - f 75 -8.7 -3.52192 | opp_overlap 697438 TTTAAGTTTACACAA GCACATCAG TTAT CTGGTGTGC TTTTCAGTTGCAAGC SSU05_0720 697533 - 698885 + | pyridine nucleotide-disulfide family oxidoreductase TERM 898 699105 - 699084 - gf 73 -5.9 -4.43012 | opp_overlap 699061 699083 ACTCGAAGATGAAAA GGTCTTTTT GAAG AAAAAGGCC AGTTTGAGTCTTCAT SSU05_0721 698857 - 700338 + | hypothetical protein TERM 899 700405 - 700452 + F 100 -6.6 -6.32976 | gap 1, opp_overlap 700404 700405 ATTTATTTTATAAAC TCTGATAA-CAGTTGATAGAA TCATGCT TTCTAGCCACTGCTTATCAGA TTTTTTTATTTTTTT TERM 900 702046 - 702036 - g 88 -6.8 -5.10497 | AAGGGATGGAAAAAA GCTG TCG CAGC AACTCAACTATTTGC glpK 700524 - 702083 + | glycerol kinase TERM 901 703622 - 703606 - g 70 -5.9 -4.35885 | ACGTAGCAGAAGAAA TTGAACA TCT TGCTCAA CTAGGTGTGAAGAAA SSU05_0723 702150 - 703988 + | alpha-glycerophosphate oxidase SSU05_0724 703999 - 704709 + | glycerol uptake facilitator protein TERM 902 704718 - 704745 + F 100 -10 -5.5604 | opp_overlap 704717 TTTTTAAAAAATATC CTTCTCTAATCA GCAA TGGTTAGGGAAG TTTTTTATTACTTGG SSU05_0725 704841 - 705791 + | glyoxalase family protein TERM 903 705797 - 705773 - f 93 -6.5 -5.58209 | overlap 705775 GGAAATCGAAAAAAA TCTCTCCCAAC GTT ATTAGGAGAAA TGAAGTATGGATTAT SSU05_0726 705804 - 705899 + | hypothetical protein SSU05_0727 706014 - 706406 + | hypothetical protein TERM 904 706400 - 706419 + T 71 -5 -4.68124 | opp_overlap 706394 706400, overlap 706394 AAGAATAGACAAAAA GACCTGAA CAAG TTCAAGTC TTTTATGTGTCTTAG TERM 905 706419 - 706400 - T 90 -7.2 -5.1383 | opp_overlap 706400 706394, overlap 706394 AAGAATAGACAAAAA GACCTGAA CAAG TTCAAGTC TTTTATGTGTCTTAG SSU05_0728 708221 - 706431 - | oligoendopeptidase F SSU05_0729 708352 - 708726 + | oxygen-sensitive ribonucleoside-triphosphate reductase TERM 906 708733 - 708748 + F 93 -7.6 -5.15526 | opp_overlap 708733 GTACGTTAAGAGAAA CCTAGA GAAA TCTAGG TTTTTGCTTTTATAT TERM 907 708748 - 708733 - f 78 -7.6 -4.20368 | opp_overlap 708733 GTACGTTAAGAGAAA CCTAGA GAAA TCTAGG TTTTTGCTTTTATAT TERM 908 709077 - 709088 + G 73 -5.8 -4.46212 | GTGAGCAAATTGGCG GTCC TGAA GGAC TTTTCTACTCAAACA TERM 909 709409 - 709387 - g 77 -8.4 -4.05491 | opp_overlap 709390 709393, overlap 709390 ATTGAAAAACAAAGA CATCAACCGC GTC GCAGTTGTTG GTGCTGGTTACATCG SSU05_0730 708896 - 710278 + | NAD(FAD)-dependent dehydrogenase TERM 910 710295 - 710314 + F 100 -10 -5.63103 | opp_overlap 710295 710290 TAATTGAATACAAAA GCTCAGAG ATGA CTCTGGGC TTTTTTTGCTTGCCA TERM 911 710314 - 710295 - f 84 -7.8 -4.7033 | opp_overlap 710295, overlap 710290 TAATTGAATACAAAA GCTCAGAG ATGA CTCTGGGC TTTTTTTGCTTGCCA TERM 912 711495 - 711482 - g 71 -3.1 -5.02074 | overlap 711483 711484 CGACGTCCCAAAAAA CTCTG GACA CAGAA TGCCCAAGGGGATTT TERM 913 712259 - 712271 + G 72 -7.7 -3.87112 | CACGCAGCCAAAGGT CTGGA ATT TCCAG TTGTCTTCTTGATTG SSU05_0731 710567 - 712846 + | superfamily I DNA/RNA helicase TERM 914 713021 - 713039 + F 73 -9 -3.31162 | overlap 713019 ACAAGTACTATATTT GTATTCTA GTA TAGAATAC TGTATTTACTGGTCA TERM 915 713074 - 713100 + F 100 -10.3 -5.5208 | opp_overlap 713088 TCATCGTAGGTGTAA CTCCATTTGAT AAACC ATCAGATGGAG TTTTTTCTATTGTCG SSU05_0732 713333 - 713980 + | phosphatase/phosphohexomutase TERM 916 714683 - 714670 - g 74 -6.7 -4.33274 | CGGACAGTAGCAAAA GCAGT CGAA ACTGC CAAACGATTTATTAC SSU05_0733 713977 - 714774 + | phosphomethylpyrimidine kinase SSU05_0734 714779 - 715564 + | hydroxyethylthiazole kinase SSU05_0735 715509 - 716246 + | thiamine-phosphate pyrophosphorylase SSU05_0736 716703 - 717404 + | hypothetical protein SSU05_0737 717416 - 717814 + | uridine phosphorylase SSU05_0738 717836 - 718162 + | uridine phosphorylase SSU05_0739 718167 - 718778 + | hypothetical protein SSU05_0740 718789 - 719553 + | cobalt ABC transporter permease protein SSU05_0741 719553 - 720407 + | cobalt ABC transporter ATP-binding protein SSU05_0742 720404 - 721201 + | cobalt ABC transporter ATP-binding protein SSU05_0743 721796 - 722506 + | HAD superfamily hydrolase TERM 917 723280 - 723265 - g 74 -4 -4.96646 | overlap 723259 GTACACAAGGAAAAA TGACAA TTTA TTGCCA TATTTCTTAGGACAT SSU05_0744 722585 - 723349 + | hypothetical protein TERM 918 723456 - 723413 - f 93 -11.9 -3.91144 | opp_overlap 723413 CCTACAGCTGACAAA CGGATGATGATACGTAGTT TCTATT AACTTGGTATCATCACCCG TTTTATTGTGCTGAT TERM 919 723413 - 723456 + F 100 -9.7 -4.81814 | opp_overlap 723413 CCTACAGCTGACAAA CGGATGATGATACGTAGTT TCTATT AACTTGGTATCATCACCCG TTTTATTGTGCTGAT TERM 920 724004 - 724023 + F 91 -10 -4.40003 | AACATCATATATGTC CACCAGTC GAAA GGCTGGTG TTTCTATTTATGACA SSU05_0745 724191 - 724949 + | D-alanyl-D-alanine carboxypeptidase SSU05_0746 725038 - 725481 + | hypothetical protein TERM 921 725517 - 725478 - T 100 -21.2 -4.44245 | opp_overlap 725478 725484, overlap 725484 ATATTACGCAGAAAA CTAAAATAGATTGGACAA GGCC TTGTCCAATCTATTTTAG TTTTTGCCAATAAGC TERM 922 725478 - 725517 + T 100 -21.2 -4.59773 | opp_overlap 725478 725484, overlap 725484 ATATTACGCAGAAAA CTAAAATAGATTGGACAA GGCC TTGTCCAATCTATTTTAG TTTTTGCCAATAAGC TERM 923 725511 - 725484 - T 100 -14.4 -4.73108 | opp_overlap 725478 725484, overlap 725478 CGCAGAAAACTAAAA TAGATTGGACAA GGCC TTGTCCAATCTA TTTTAGTTTTTGCCA TERM 924 725484 - 725511 + T 100 -14.4 -4.77757 | opp_overlap 725484 725478, overlap 725478 CGCAGAAAACTAAAA TAGATTGGACAA GGCC TTGTCCAATCTA TTTTAGTTTTTGCCA SSU05_0747 727119 - 725509 - | permease SSU05_0748 727859 - 727116 - | ABC-type multidrug transport system, ATPase component TERM 925 727721 - 727699 - G 78 -10.6 -3.32819 | opp_overlap 727694 727713 727718 GAGATAGTTCCATAA CTGGCTTCGA TTA TCGAAGTCAG TAGACTGATTGTCGT uvrC 728015 - 729883 + | excinuclease ABC subunit C SSU05_0750 729940 - 730068 + | hypothetical protein TERM 926 731185 - 731175 - g 87 -5.4 -5.46657 | GAGTTCAAGAAAAAA TTGG CAA CCAA CTATGATGAGTTTGA obgE 730272 - 731585 + | GTPase ObgE TERM 927 731670 - 731696 + F 100 -13.8 -3.14647 | opp_overlap 731665 731676, overlap 731679 ACCTTACTAACTTCA CCCAAATGGTGG TAT CAACCATTTGGG TTCCGTGTCGTAACT SSU05_0752 731947 - 732123 + | hypothetical protein TERM 928 736145 - 736120 - g 71 -6.9 -4.10453 | gap 1, opp_overlap 736138 GAAACTCCTGCAAAA CCTCAAGCAGGT AAA ACC-GCTTCAGG TAAAGCTCAATTGCC SSU05_0753 732475 - 736260 + | hypothetical protein TERM 929 736399 - 736430 + F 82 -11.7 -2.88544 | opp_overlap 736408, overlap 736408 TCGCTCCATTTCCAA CCTCCAACAGTCA CTACTC TGACTGTTGGAGC TGTGTGGGGGTGGGA SSU05_0754 736551 - 739817 + | ATP-dependent nuclease, subunit B TERM 930 743410 - 743387 - gT 85 -6 -5.09895 | GAGGCATTGAAAAAA GCCTACAAGA TAGA TCGTGTAGAC TGCCATTTGATTTTG SSU05_0755 739784 - 743467 + | ATP-dependent exoDNAse beta subunit TERM 931 743598 - 743581 - T 83 -7 -4.74219 | opp_overlap 743581, overlap 743576 ATAAATAAATTAAAA GCGAGT GGTTAA ACTCGC TTTTTCTGTTTGGTT TERM 932 743581 - 743598 + T 90 -7 -5.23644 | opp_overlap 743581 743576 ATAAATAAATTAAAA GCGAGT GGTTAA ACTCGC TTTTTCTGTTTGGTT SSU05_0756 744257 - 743589 - | putative glycerol-3-phosphate acyltransferase PlsY TERM 933 743625 - 743645 + g 70 -2.5 -5.03314 | overlap 743630 GGTTAGATTGAGTCC GAATGGGAC AAG GTTCTCTTC TTTTTTCAAAATCCG TERM 934 744910 - 744884 - g 88 -6.6 -5.0925 | CTCCAAAATCAAAAA CAGGTACAAAAG TTA CCTTTATGCCTG ACGATACCATCTTCT SSU05_0757 744376 - 745101 + | Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit SSU05_0758 745155 - 746318 + | Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit TERM 935 747047 - 747035 - g 77 -6.3 -4.74103 | CCTTCAAGTGAAAAA TCTCA TTT TGAGA CAATTATTCCCCTAG SSU05_0759 746348 - 747160 + | ABC-type phosphate transport system, ATPase component SSU05_0760 747329 - 747565 + | cell division protein SSU05_0761 747537 - 747947 + | cell division protein TERM 936 748154 - 748138 - g 76 -6.6 -4.4727 | GCAACATGCAGAAAA CTTGCT ATCTG AGCAAG GAAAATTAGAACATT SSU05_0762 747968 - 748483 + | hypothetical protein TERM 937 748660 - 748648 - g 71 -3.4 -5.01535 | CGACAATTAGAAAAA CTTC GCTGG GAAG CTCAAGCAAATGGCA SSU05_0763 748465 - 748938 + | hypothetical protein SSU05_0764 749139 - 751592 + | DNA topoisomerase IV subunit A SSU05_0765 751725 - 752273 + | phosphoribosylformylglycinamidine synthase domain-containing protein TERM 938 752403 - 752421 + F 72 -8.2 -3.49475 | overlap 752401 CAGTAAACTTTGACG GGAAAACC CTG GGTTTTTC TTATATAAAACTACC SSU05_0766 752648 - 753172 + | branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase SSU05_0767 752836 - 753408 + | branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase TERM 939 753412 - 753440 + F 93 -6.8 -5.626 | gap 1, opp_overlap 753417 753418, overlap 753414 GAAGTAGATTAATTT CAGAAG-GCTTGC ACTT GCAAGCTCTTCTC TTTTTTTGTAGAATA TERM 940 753414 - 753438 + F 91 -9.4 -4.45201 | gap 1, opp_overlap 753417 753418, overlap 753412 AGTAGATTAATTTCA GAAG-GCTTGC ACTT GCAAGCTCTTC TCTTTTTTTGTAGAA SSU05_0768 753469 - 753708 + | hypothetical protein TERM 941 753720 - 753750 + TF 75 -9.2 -3.25823 | opp_overlap 753711 753722, overlap 753722 CTAAAAGACTTGTAA TAGTCGCTATTTTA TGT TAGAATAGTGACTG TTAGTGTACGGAGAG TERM 942 753722 - 753748 + TF 75 -9.6 -3.19602 | opp_overlap 753711 753722, overlap 753720 AAAAGACTTGTAATA GTCGCTATTTTA TGT TAGAATAGTGAC TGTTAGTGTACGGAG SSU05_0771 754923 - 754777 - | hypothetical protein SSU05_0769 754311 - 754901 + | putative ribosomal protein S1-like DNA-binding protein SSU05_0770 754898 - 755260 + | hypothetical protein SSU05_0772 755187 - 755318 + | putative ribosomal protein S1-like DNA-binding protein TERM 943 755415 - 755405 - g 82 -6.8 -4.7657 | GAAAAAGCTGAAAAA CGTG CTC CACG TCCACGTCGTCAAAA SSU05_0773 755315 - 755515 + | putative ribosomal protein S1-like DNA-binding protein TERM 944 755542 - 755528 - f 78 -5.7 -5.00642 | opp_overlap 755522 755528 TAATTCATATAAAAA CTTGC CTTGT GCAAG TTTTTCCTTTCCACC TERM 945 755528 - 755542 + F 78 -5.7 -4.98531 | opp_overlap 755528, overlap 755522 TAATTCATATAAAAA CTTGC CTTGT GCAAG TTTTTCCTTTCCACC TERM 946 755637 - 755652 + F 91 -6.1 -5.64304 | opp_overlap 755637, overlap 755651 GGACTAAATTGAAAA GCCTG CATTAA CAGGC TTTTTTGTTATATTA TERM 947 755652 - 755637 - f 76 -6.8 -4.37711 | opp_overlap 755637 755651 GGACTAAATTGAAAA GCCTGC ATTA ACAGGC TTTTTTGTTATATTA SSU05_0774 755686 - 756714 + | threonine aldolase TERM 948 756726 - 756742 + F 82 -6.6 -5.04601 | opp_overlap 756726, overlap 756720 ATAATTAATAAAAAA GAAAGG GTTAG CCTTTC TTTTTAGTTTGTAAA TERM 949 756742 - 756726 - f 93 -6.6 -5.57396 | opp_overlap 756726 756720 ATAATTAATAAAAAA GAAAGG GTTAG CCTTTC TTTTTAGTTTGTAAA TERM 950 756936 - 756948 + F 72 -7.7 -3.76952 | TAAATGGAGCATACT GACCA TCC TGGTC TTTAACTTCACTGGA TERM 951 757013 - 756980 - f 74 -8.1 -3.67775 | overlap 756981 ACCCTGATTGAACAA CCGGTCAATACTCCC ATGG GGGAGCAATGAACGA GTATCAAATGGTTCT TERM 952 757012 - 756981 - f 73 -9.4 -2.80344 | overlap 756980 CCCTGATTGAACAAC CGGTCAATACTCCC ATGG GGGAGCAATGAACG AGTATCAAATGGTTC SSU05_0775 757383 - 757481 + | hypothetical protein TERM 953 758036 - 758014 - g 72 -9.2 -3.10622 | opp_overlap 758013 758014 758024 758025, overlap 758013 CAGCCGTAAAAGAAT CTGCGCTTTG GCT CAAAACGCAA GGTTTTGAGGTTGAT SSU05_0776 757704 - 758846 + | cysteine sulfinate desulfinase/cysteine desulfurase SSU05_0777 758848 - 760065 + | thiamine biosynthesis protein ThiI TERM 954 760094 - 760109 + F 100 -9 -5.14965 | opp_overlap 760094 TGGCATACATTTAAA TCCAGC TATT GCTGGA TTTTTTAATACGAAT TERM 955 760109 - 760094 - f 78 -9 -3.74077 | opp_overlap 760094 TGGCATACATTTAAA TCCAGC TATT GCTGGA TTTTTTAATACGAAT SSU05_0778 760187 - 760765 + | branched-chain amino acid permease SSU05_0779 760831 - 760932 + | branched-chain amino acid permease SSU05_0780 760947 - 761513 + | branched-chain amino acid permease TERM 956 761529 - 761546 + F 93 -7.7 -5.22006 | opp_overlap 761529 761524 AAAAATGATACAAAA CACTTGC ATTT GCAGGTG TTTTTGTTATAATAG TERM 957 761546 - 761529 - f 73 -5.5 -4.68446 | opp_overlap 761529, overlap 761524 AAAAATGATACAAAA CACTTGC ATTT GCAGGTG TTTTTGTTATAATAG TERM 958 761685 - 761669 - g 70 -7.3 -3.83205 | AGTCTTCACATCAAA TTCGGGT AAG ACCCAAA AATCATAGGAGGTGC rplU 761629 - 762018 + | 50S ribosomal protein L21 rpmA 762065 - 762358 + | 50S ribosomal protein L27 TERM 959 762381 - 762407 + F 95 -7.3 -5.42265 | opp_overlap 762381 AATGGCTTTACAATA GGCTTTCCGAG TTGTT TTCGGAGAGTC TTTTTTGTAATTTGA SSU05_0783 762596 - 762709 + | C-P lyase regulatory protein TERM 960 762725 - 762747 + F 100 -7.1 -5.59357 | opp_overlap 762724 762725 TCTATTTGCGAAAAC GCAAGAGTT CAGCA AATTCTTGC TTTTTTTGATATAAT SSU05_0784 762792 - 763706 + | CpsY SSU05_0785 763657 - 764163 + | prolipoprotein signal peptidase; Lsp SSU05_0786 764147 - 765076 + | YlyB TERM 961 765135 - 765121 - f 74 -4.2 -5.04222 | opp_overlap 765121 TAAGGAAATTAAAAA TGGGAA ATT TACCCA ATTGTCCCAAAAGTA TERM 962 765218 - 765173 - f 78 -5.4 -4.90296 | gap 1, overlap 765174 765175 765215 AAAAGTTTATAAAAA CGGGGCCCTTTTGGTTTGCCC TGGGG GGGCAAACG-AATGGAACCCA CCAAATTTAGTTGGG SSU05_0787 765506 - 765850 + | hypothetical protein SSU05_0788 765844 - 766155 + | hypothetical protein TERM 963 766310 - 766329 + F 100 -10.8 -5.07941 | GCCTATATTTTCATA GTCTCCTT GTAT AAGGAGAC TTTTTCTATACTTTT SSU05_0789 766354 - 766875 + | pyrimidine regulatory protein PyrR pyrB 766931 - 767854 + | aspartate carbamoyltransferase catalytic subunit TERM 964 768435 - 768418 - g 75 -5.6 -4.6971 | TAAAGGCTAAGAAAA TTCCAG CAATTT CTGGAA TTGACACACGCGCCC SSU05_0791 768102 - 769181 + | carbamoyl phosphate synthase small subunit TERM 965 769215 - 769173 - f 82 -6.4 -5.0133 | overlap 769174 769175 GATTCGTTTAAAAAA GGGCAGTAAGGCTTAACT ACTATCG AGCTAAACCTTACTGCGT CGGTCAGAGCAAGTC TERM 966 769214 - 769174 - f 80 -9.9 -3.60316 | overlap 769173 769175 ATTCGTTTAAAAAAG GGCAGTAAGGCTTAACT ACTATCG AGCTAAACCTTACTGCG TCGGTCAGAGCAAGT TERM 967 769213 - 769175 - f 90 -13.4 -2.75708 | overlap 769174 769173 TTCGTTTAAAAAAGG GCAGTAAGGCTTAACT ACTATCG AGCTAAACCTTACTGC GTCGGTCAGAGCAAG TERM 968 769337 - 769299 - f 72 -9.2 -2.63631 | CTAACTCTGACACTA GTTTAGAATTTCAATT ATTATCG AATTGAGATTCTAAAC GTCGGACTTATCTTA TERM 969 769491 - 769461 - f 73 -5.5 -4.55887 | gap 2, opp_overlap 769459 769464, overlap 769455 TGCGAAAAAGATAAA CGTCGTCTTGATGCT TGA AGCATC-AG-CGTCG TGTTTCCTATTTTCG carB 769475 - 772720 + | carbamoyl phosphate synthase large subunit TERM 970 772730 - 772756 + F 86 -6.6 -5.23316 | opp_overlap 772730 ATATAGAAGATACTA TCAGGATGAGCT TTG AATTCGTCCTGA TTTTTTGATATACTG SSU05_0793 772778 - 773539 + | SAM-dependent methyltransferase SSU05_0794 773536 - 774183 + | pyrrolidone-carboxylate peptidase SSU05_0795 774183 - 774491 + | hypothetical protein SSU05_0796 774555 - 774887 + | 30S ribosomal protein S16 TERM 971 775078 - 775092 + G 71 -4.3 -4.87892 | GACGCACAATTTTTG CAATC AGAAC GATTG TTTATTTTGTTCCAA SSU05_0797 774909 - 775151 + | RNA-binding protein TERM 972 775155 - 775170 + F 73 -6.8 -4.19238 | opp_overlap 775155 775157 GAGAAAGAATAGAAA GTCACC GTTT GGTGGC TTTTAACGTTGACAA TERM 973 775199 - 775187 - g 86 -10.5 -3.89614 | opp_overlap 775187 TTTAACGTTGACAAA GGGGC CTA GCCCC TTTTTTACATATAGA TERM 974 775187 - 775199 + G 100 -10.5 -5.1287 | opp_overlap 775187 TTTAACGTTGACAAA GGGGC CTA GCCCC TTTTTTACATATAGA SSU05_0798 775179 - 776963 + | putative ABC transporter, ATP-binding protein SSU05_0799 776972 - 777838 + | ABC-type multidrug transport system, ATPase and permease component SSU05_0800 777777 - 778742 + | ABC-type multidrug transport system, ATPase and permease component TERM 975 778776 - 778747 - Tf 86 -4.3 -5.67283 | gap 1, opp_overlap 778751, overlap 778751 AATCCAAATAAAAAA CGAACTCCCTTGTC AGT GACA-GGGAGTTTT CTCATATACATGTTT TERM 976 778751 - 778772 + TF 91 -9.5 -4.51378 | gap 1, opp_overlap 778747 778751 CAAATAAAAAACGAA CTCCCTTGTC AGT GACA-GGGAG TTTTCTCATATACAT TERM 977 778772 - 778751 - Tf 85 -9.5 -4.07772 | gap 1, opp_overlap 778751, overlap 778747 CAAATAAAAAACGAA CTCCCTTGTC AGT GACA-GGGAG TTTTCTCATATACAT SSU05_0802 779722 - 778799 - | xylanase/chitin deacetylase SSU05_0801 779647 - 781113 + | homoserine dehydrogenase TERM 978 781667 - 781657 - g 74 -6.8 -4.30987 | overlap 781658 ATGGGGTACAAGAAA GCAG TGG CTGC TAGTGCCATTGCAAA SSU05_0803 781117 - 781977 + | homoserine kinase TERM 979 782023 - 782064 + F 93 -3.8 -5.97575 | gap 2 ACATGTTTATTTATT GGAGTTCGCCATCGCTACTG TAAG CGGTAGAAA-GG-GAACTCC TTTTTTTTGTGCATT murB 782212 - 783120 + | UDP-N-acetylenolpyruvoylglucosamine reductase SSU05_0805 783159 - 784313 + | ABC-type spermidine/putrescine transport system, ATPase component SSU05_0806 784282 - 785097 + | ABC-type spermidine/putrescine transport system, permease component I SSU05_0807 785070 - 785867 + | ABC-type spermidine/putrescine transport system, permease component II TERM 980 786552 - 786563 + G 73 -5.8 -4.56367 | overlap 786551 TGATACAAGATGCGG CAGC AATT GCTG TTTCTTTCTCAGGTG SSU05_0808 785867 - 786937 + | spermidine/putrescine-binding periplasmic protein TERM 981 788352 - 788342 - g 74 -4 -5.03145 | CAATGTTGGAAAAAA TTCT GCC AGAA GAAGTAGAACAGCAA SSU05_0809 787051 - 788589 + | chloride channel protein EriC SSU05_0810 788987 - 788586 - | transposase TERM 982 789193 - 789150 - H 77 -11.2 -2.54619 | gap 1, opp_overlap 789156, overlap 789149 789152 789155 789156 CAATAATGCACCAAC CACAAGGCCCTCACTAGGTAT ATA AT-CTTAGTGAGGGCTTTATG CTCATTCTCATTATT TERM 983 789156 - 789187 + H 100 -13.2 -4.03093 | gap 1, opp_overlap 789155 789152 789150 789149 789156 TGCACCAACCACAAG GCCCTCACTAGGTAT ATA AT-CTTAGTGAGGGC TTTATGCTCATTCTC TERM 984 789187 - 789156 - H 78 -11 -2.72096 | gap 1, opp_overlap 789156, overlap 789155 789152 789150 789149 TGCACCAACCACAAG GCCCTCACTAGGTAT ATA AT-CTTAGTGAGGGC TTTATGCTCATTCTC TERM 985 789397 - 789373 - H 70 -8.7 -3.03124 | overlap 789375 TTTTATGTTTTAATA TATTTATTGGC TTT GCCAATCAATA AAGGAGAAAAACTAG TERM 986 789444 - 789432 - H 78 -6.3 -4.79667 | opp_overlap 789432 AAAAGTTATGAAAAA GAAAG AAA CTTTC TCACTTCCGGAAGTA SSU05_0811 789473 - 790372 + | subtilisin-like serine protease TERM 987 793907 - 793882 - g 89 -6.1 -5.28176 | GCCACTGACAAAAAA GATGAAGGCAC TGTA ACGCCTCCACC TATAGACTCAGAAAA SSU05_0812 790369 - 794181 + | subtilisin-like serine protease TERM 988 794345 - 794373 + TF 83 -8.9 -4.3453 | opp_overlap 794346 794348, overlap 794348 AGTTTGTTATATAAA AGACCGCTTAATC ATT GATTAGGCGGTTG TTTGTGTTTGAAATT TERM 989 794372 - 794346 - Tf 82 -8 -4.52589 | opp_overlap 794345 794348, overlap 794348 GTTTGTTATATAAAA GACCGCTTAATC ATT GATTAGGCGGTT GTTTGTGTTTGAAAT TERM 990 794370 - 794348 - Tf 88 -10.6 -3.87627 | opp_overlap 794345 794348, overlap 794346 TTGTTATATAAAAGA CCGCTTAATC ATT GATTAGGCGG TTGTTTGTGTTTGAA TERM 991 794348 - 794370 + TF 95 -12.8 -4.27843 | opp_overlap 794348 794346, overlap 794345 TTGTTATATAAAAGA CCGCTTAATC ATT GATTAGGCGG TTGTTTGTGTTTGAA SSU05_0814 795289 - 794363 - | sugar kinase TERM 992 794660 - 794672 + gF 71 -4.9 -4.63486 | AGCGGAACTTTTAGC TACAA GGA TTGTA TTTTCTTGAAAAGAT SSU05_0813 795252 - 795935 + | EndoIII-related endonuclease SSU05_0815 796077 - 797204 + | guanosine 5'-monophosphate oxidoreductase TERM 993 797212 - 797230 + F 89 -11 -3.84514 | opp_overlap 797210 797212 CTATCTAGTCAAAGA GGACTTGC AAT GCAGGTCC TTTACTCGTTACAAT TERM 994 797230 - 797212 - f 73 -8.8 -3.41569 | opp_overlap 797212, overlap 797210 CTATCTAGTCAAAGA GGACTTGC AAT GCAGGTCC TTTACTCGTTACAAT TERM 995 797844 - 797831 - g 72 -9.5 -3.0879 | overlap 797830 AATTTATGGGAAAAT GGGCC TCCC GGCCC TAGGCGGAGCTGGAG SSU05_0816 797274 - 797930 + | hypothetical protein SSU05_0817 797917 - 798165 + | hypothetical protein SSU05_0818 798210 - 798623 + | Na+-driven multidrug efflux pump TERM 996 798637 - 798652 + F 86 -6.8 -5.12474 | opp_overlap 798637 AAATTAACTATGAAA GTCGGA GGCA TCCGGC TTTTTCTCTCTTGTG rimM 798721 - 799239 + | 16S rRNA-processing protein trmD 799229 - 799954 + | tRNA (guanine-N(1)-)-methyltransferase TERM 997 799942 - 799960 + F 81 -5.3 -5.1356 | opp_overlap 799942 AATCAAAGCAGAAGA CACAGTT GATTA GACTGTG TTTTTCTTGCTAGAA SSU05_0821 799958 - 801040 + | histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase TERM 998 801026 - 801050 + F 100 -2.9 -6.28401 | AAAATGATTGAGAAA CTAGTGGAA GCGTAAA TTCTGCTAG TTTTTTTGTTTTTTG SSU05_0822 801106 - 801891 + | sugar metabolism transcriptional regulator SSU05_0823 801888 - 802799 + | fructose-1-phosphate kinase-like protein SSU05_0824 802796 - 804121 + | phosphotransferase system, fructose-specific IIC component SSU05_0825 804088 - 804750 + | phosphotransferase system, fructose-specific IIC component TERM 999 804763 - 804779 + F 100 -8.7 -5.18561 | opp_overlap 804763 TAATTTTGATTGAAA CCTTGCT TCT GGCAAGG TTTTTTAGCTATTTC TERM 1000 804779 - 804763 - f 72 -8 -3.65827 | opp_overlap 804763 TAATTTTGATTGAAA CCTTGC TTCTG GCAAGG TTTTTTAGCTATTTC TERM 1001 804959 - 804942 - g 85 -7.1 -4.87133 | opp_overlap 804942 ATTCCGGAAACAAAA TTGAAAG TTGA CTTTCAA TTGATTGAGCAAAAT SSU05_0826 804846 - 805220 + | hypothetical protein SSU05_0827 805222 - 806073 + | hypothetical protein SSU05_0828 806082 - 806849 + | dihydrodipicolinate reductase TERM 1002 806863 - 806883 + G 93 -11.9 -3.66666 | opp_overlap 806861, overlap 806880 GAAATTAAACAATCT GCCTTCTGA GTT TCAGGAGGC TTTGCCGATTTTAGA TERM 1003 807286 - 807274 - g 70 -5.5 -4.431 | GACTGACTTAGAAAA CCGCA CCC TACGG GCTGTAGGCATCCCG SSU05_0829 806846 - 808057 + | tRNA CCA-pyrophosphorylase SSU05_0830 808050 - 809918 + | ABC transporter ATPase TERM 1004 810053 - 810067 + G 70 -2.8 -4.9218 | overlap 810055 ATCCATGATATTGCT GACAAG CAC CTTGTA TTTTTATAGTCAGTC SSU05_0831 809919 - 810254 + | hypothetical protein TERM 1005 810234 - 810259 + F 88 -10.6 -3.88603 | overlap 810228 ATTCAATTTTTAATT TTGCTCTATC TTTTTC GATAGAGCAA TTAATTTTTATCCGT SSU05_0832 810311 - 811309 + | transcriptional regulator/sugar kinase TERM 1006 811319 - 811334 + F 73 -6.8 -4.2528 | opp_overlap 811319 AAATAATCGTTAAAA GCAGGG GAAA CTCTGC TTTATTCAATTCCGC SSU05_0833 811721 - 812029 + | hypothetical protein TERM 1007 812033 - 812051 + F 86 -6.7 -5.16237 | opp_overlap 812033 TTTTTCAAATGAGAA CTCCGGT GCAAA ACTGGAG TTTTTTGCTAGAATT TERM 1008 812646 - 812621 - g 75 -9.1 -3.61536 | AACTCAACGGTCAAA TGATATGTTGG TAGC CCATCATATCA ACGCTATGCAGTATG thyA 812082 - 812921 + | thymidylate synthase SSU05_0835 813207 - 813719 + | dihydrofolate reductase SSU05_0836 813722 - 813895 + | hypothetical protein clpX 813917 - 815107 + | ATP-dependent protease ATP-binding subunit TERM 1009 815176 - 815151 - f 76 -3.3 -5.27709 | opp_overlap 815151 GCATAAAAAAATAAA GGGTGGAAA CTGATTGT TTTCTACCC TTATTTATGAAAGGT TERM 1010 815262 - 815248 - f 85 -9.2 -4.07687 | AGTGCTGTTTCAAAA GCCCAG TAT CCGGGC TATGACATTCCAGCA SSU05_0838 815561 - 815743 + | GTPase SSU05_0839 815818 - 816150 + | nucleoside diphosphate kinase TERM 1011 816259 - 816242 - f 75 -9.9 -2.89556 | opp_overlap 816242, overlap 816244 AAATAGCAGAGCAGA CACCTAG TTTT CTAGGTG TTTTTCTTTGATAAA TERM 1012 816242 - 816259 + F 100 -9.9 -5.33405 | opp_overlap 816242 816244 AAATAGCAGAGCAGA CACCTAG TTTT CTAGGTG TTTTTCTTTGATAAA SSU05_0840 816336 - 817007 + | hypothetical protein TERM 1013 819054 - 819038 - g 70 -2.9 -5.03747 | overlap 819040 819051 AAAGCTGGTAAAAAA CGGATGA AAG CCATCGG CTCTGTCGAAGTTCC SSU05_0841 817289 - 819121 + | GTP-binding protein LepA TERM 1014 819163 - 819138 - T 91 -9.8 -4.62441 | opp_overlap 819138 CTTGATACAAAGAAA CACTCCTGCA TTTTCT TGCAAGAGTG TTTTCTCTTATTTAC TERM 1015 819138 - 819163 + T 88 -7.6 -4.84673 | opp_overlap 819138 CTTGATACAAAGAAA CACTCCTGCA TTTTCT TGCAAGAGTG TTTTCTCTTATTTAC SSU05_0842 819353 - 819171 - | 4-oxalocrotonate tautomerase TERM 1016 819453 - 819424 - H 80 -11.1 -3.22951 | opp_overlap 819423 819429, overlap 819429 GATATTTTCATAAGA TATAACAAAATAT ATTT ATATTTTGTTATA ATAATATCGCGACAA SSU05_0843 819488 - 820630 + | hypothetical protein SSU05_0844 820504 - 820797 + | hypothetical protein TERM 1017 821092 - 821110 + G 88 -6.7 -5.22289 | opp_overlap 821092 GGTCTTAATATCAAA CAAGCTC AAAAC GGGCTTG TTTTTCTATTTCCTA SSU05_0845 820993 - 821166 + | hypothetical protein SSU05_0846 821183 - 821494 + | thymidine kinase SSU05_0847 821511 - 821765 + | thymidine kinase TERM 1018 821939 - 821909 - f 79 -8.4 -4.07746 | opp_overlap 821908 821909 821918 821934, overlap 821904 GTGTCAAAAAGATAA TTTCTCCAAGTGTT TGT AACACTTGGTCAAA ATTCCTATTTTGACT prfA 822201 - 823295 + | peptide chain release factor 1 TERM 1019 823346 - 823375 + G 81 -9.4 -3.794 | gap 1 CAATTAGTCGCAATC GGTGAAGAGGCAG AATCC CTGTC-CTTCACC TTTCGTGGCTTAAAG SSU05_0849 823295 - 824128 + | methylase of polypeptide chain release factors SSU05_0850 824115 - 824723 + | putative translation factor (SUA5) SSU05_0851 824720 - 825151 + | hypothetical protein TERM 1020 825877 - 825887 + G 71 -6.8 -4.19735 | opp_overlap 825868, overlap 825868 825866 AAAACTCTTCGTGGG CCAC GTG GTGG TTTAATTTTGACCAA glyA 825175 - 826434 + | serine hydroxymethyltransferase TERM 1021 826490 - 826509 + G 88 -9.3 -4.28254 | opp_overlap 826490 TCCTGATGATACAGA GCTGGTC CTTTCC GACCAGC TTTTGACTGTTAGCC TERM 1022 826509 - 826490 - g 71 -9.3 -3.02471 | opp_overlap 826490 TCCTGATGATACAGA GCTGGTC CTTTCC GACCAGC TTTTGACTGTTAGCC SSU05_0853 826434 - 827408 + | hypothetical protein SSU05_0854 827409 - 828008 + | lytic murein transglycosylase TERM 1023 828020 - 828039 + F 90 -8.6 -4.65895 | opp_overlap 828020 TTAATACCTATCAAA CTCATCGG AAAT CTGATGAG TTTTTAACTACAGCA SSU05_0855 828106 - 828867 + | Short-chain alcohol dehydrogenase of unknown specificity SSU05_0856 828884 - 829633 + | translation initiation factor 1 TERM 1024 829652 - 829668 + F 72 -9.5 -2.71712 | overlap 829651 829654 TTCTCTAGGAGGTTA GATGTGA CAT TCACATC ATTTGAACCAACACG SSU05_0857 829655 - 830008 + | hypothetical protein TERM 1025 830037 - 830055 + T 84 -5.2 -5.30348 | opp_overlap 830037, overlap 830041 CCATTTTCTACTTAA CACGGAGC TGT GCTCTCTG TTTTTGTTCTTCAAT SSU05_0858 830976 - 830029 - | hypothetical protein TERM 1026 830145 - 830163 + g 80 -3.9 -5.27923 | gap 1, overlap 830141 830139 TTGTGAGATCTTCCA GGAACACT GGAT AG-GTTCC TTTTTTATACAATTC TERM 1027 830367 - 830403 + g 78 -5.3 -4.91977 | opp_overlap 830354 830367 830369, overlap 830354 830369 830394 AAGGAACTGCATAAA CATTTCCATGCTTTGTT TGC AAAAAAGGATGGAAATC TTTTATCTTTTCGTA TERM 1028 830369 - 830401 + g 74 -7.9 -4.05763 | opp_overlap 830354 830369 830367, overlap 830354 830367 830394 GGAACTGCATAAACA TTTCCATGCTTTGTT TGC AAAAAAGGATGGAAA TCTTTTATCTTTTCG TERM 1029 830945 - 830928 - G 82 -5.7 -4.94992 | TCAAATCCACAAAAA TGTTTAA TTCG TTAAACA TAGATATAAAGAAGC TERM 1030 830993 - 830956 - G 93 -10.7 -4.21994 | gap 1 AAACATAGATATAAA GAAGCTGGGAAAGACATC CAT GACGACTTTCCCA-CTCC CACCGTTTATTCAAG SSU05_0859 831753 - 831004 - | hypothetical protein TERM 1031 833447 - 833437 - g 73 -5.4 -4.71482 | AGCAAATCTGAAAAA CGAA AAA TTCG ATAGACTCATTTCCT SSU05_0860 831977 - 833686 + | GTPase subunit of restriction endonuclease SSU05_0861 833683 - 834732 + | 5-methylcytosine-specific restriction enzyme subunit McrC TERM 1032 834797 - 834762 - T 100 -9.3 -6.14618 | gap 1, opp_overlap 834762 TAGAAAACAAAAAAA CAATCAAAGTAGTAGC ACTAA ACTACT-CTTTGATTG TTTTTTTATAAGACT TERM 1033 834762 - 834797 + T 100 -8.6 -5.61596 | gap 1, opp_overlap 834762 TAGAAAACAAAAAAA CAATCAAAGTAGTAG CACTAAA CTACT-CTTTGATTG TTTTTTTATAAGACT TERM 1034 834889 - 834905 + T 81 -9.5 -3.73775 | opp_overlap 834889 TAGGCATCGGGTAAA TTAGTCC ACT GGACTAA TTTACTCCCACTCAA TERM 1035 834905 - 834889 - T 78 -9.5 -3.55761 | opp_overlap 834889 TAGGCATCGGGTAAA TTAGTCC ACT GGACTAA TTTACTCCCACTCAA TERM 1036 834935 - 834966 + T 72 -9.6 -2.7035 | gap 1, opp_overlap 834930, overlap 834932 ATTGAAACAGGTATC CTCCTA-TCCCTTGT AGG ACAAGGGACTAGAAG TAGTATATACATCAA SSU05_0862 836248 - 834938 - | phage integrase family site specific recombinase SSU05_0863 836453 - 836220 - | hypothetical protein SSU05_0864 837699 - 836431 - | putative replication initiator protein TERM 1037 837709 - 837735 + r 85 -3.8 -5.60993 | opp_overlap 837709 TGACAATGTAATTCA TGCTGTCT ATAACAAGCCC AGACAGCA TTTTTTTCTAGAGCA SSU05_0865 838705 - 838181 - | hypothetical protein SSU05_0866 839237 - 840592 + | hypothetical protein TERM 1038 840578 - 840568 - f 74 -4 -5.23316 | TATGAGATTAAAAAA TTTC TTA GAAA ACCGAATATACTAAA TERM 1039 840624 - 840585 - f 100 -18.2 -3.41587 | opp_overlap 840587 840595, overlap 840587 840595 TCTTAGAAAACCGAA TATACTAAAAGCCAAGCA ATTG TGCTTGGCTTTTAGTATT CATCTAGTTCATGTT TERM 1040 840622 - 840587 - f 100 -20.8 -3.273 | opp_overlap 840587 840595, overlap 840585 840595 TTAGAAAACCGAATA TACTAAAAGCCAAGCA ATTG TGCTTGGCTTTTAGTA TTCATCTAGTTCATG TERM 1041 840587 - 840622 + F 100 -20.8 -3.33361 | opp_overlap 840587 840585 840595, overlap 840595 TTAGAAAACCGAATA TACTAAAAGCCAAGCA ATTG TGCTTGGCTTTTAGTA TTCATCTAGTTCATG TERM 1042 840614 - 840595 - f 100 -12.2 -4.43213 | opp_overlap 840587 840595, overlap 840587 840585 CCGAATATACTAAAA GCCAAGCA ATTG TGCTTGGC TTTTAGTATTCATCT TERM 1043 840595 - 840614 + F 100 -12.2 -4.45399 | opp_overlap 840595 840587 840585, overlap 840587 CCGAATATACTAAAA GCCAAGCA ATTG TGCTTGGC TTTTAGTATTCATCT SSU05_0867 840939 - 841916 + | hypothetical protein SSU05_0868 841932 - 842771 + | hypothetical protein SSU05_0869 842788 - 843192 + | hypothetical protein TERM 1044 843242 - 843201 - f 95 -13.4 -3.39407 | opp_overlap 843211, overlap 843211 AAGATAATCTCACAA TAATAAAAAAGGTCTTGA TAGGTC TCAAGACCTTTTTTATGA ACACTTATTCAATTT TERM 1045 843211 - 843232 + F 100 -8.8 -5.24531 | opp_overlap 843201 843211 CACAATAATAAAAAA GGTCTTGA TAGGTC TCAAGACC TTTTTTATGAACACT TERM 1046 843232 - 843211 - f 100 -8.8 -5.68489 | opp_overlap 843211, overlap 843201 CACAATAATAAAAAA GGTCTTGA TAGGTC TCAAGACC TTTTTTATGAACACT TERM 1047 843790 - 843776 - g 75 -7.2 -4.35524 | GCGCTAAATCTAAAA CAATTG TCA CAATTG AACACTTTTTTAGAA SSU05_0870 843347 - 843991 + | hypothetical protein SSU05_0871 844021 - 844368 + | hypothetical protein SSU05_0872 844358 - 845974 + | putative cytoplasmic protein TERM 1048 846070 - 846040 - T 100 -12.8 -5.69473 | opp_overlap 846040 TAGAGTATAAAAAAA GAATTAGCTAGAAA TTT TTTCTGGCTAATTC TTTTTTTCGGGGGGA TERM 1049 846040 - 846070 + T 100 -15 -5.40072 | opp_overlap 846040 TAGAGTATAAAAAAA GAATTAGCTAGAAA TTT TTTCTGGCTAATTC TTTTTTTCGGGGGGA TERM 1050 846091 - 846115 + T 73 -5.7 -4.652 | TTCGGGGGGATTTAG GGGGGAATC AAACAAA GATTCACCC TTTTTAGACTAGTTT guaA 847736 - 846186 - | bifunctional GMP synthase/glutamine amidotransferase protein SSU05_0874 848012 - 848710 + | transcriptional regulator TERM 1051 848743 - 848768 + F 70 -3.3 -5.05116 | opp_overlap 848743, overlap 848738 AAAACATTTTTAAAA TCCGTAATC TTTCTAGT GATGACGGA TTTTCTTATTTATAA SSU05_0875 848804 - 849145 + | hypothetical protein TERM 1052 849482 - 849456 - g 71 -4.4 -4.84363 | overlap 849457 TCAAATCACCAAAAA TTCCAACTATCA TTA TGATGGCTGGAT TGCAGGGTGCTGGTA SSU05_0876 849158 - 850696 + | Signal recognition particle GTPase TERM 1053 850711 - 850676 - f 86 -8.5 -4.49531 | opp_overlap 850684, overlap 850684 AATAAAATCAAGAAA GCCAAAAAGAAGAGA AAATAA TCTCTTCTTTTTTAC TTTTTATTCGAAGAA TERM 1054 850703 - 850684 - f 80 -6.5 -4.86939 | opp_overlap 850684, overlap 850676 CAAGAAAGCCAAAAA GAAGAGA AAATAA TCTCTTC TTTTTTACTTTTTAT TERM 1055 850684 - 850703 + F 93 -6.5 -5.56112 | opp_overlap 850676 850684 CAAGAAAGCCAAAAA GAAGAGA AAATAA TCTCTTC TTTTTTACTTTTTAT TERM 1056 850964 - 850943 - g 80 -10.1 -3.68557 | overlap 850961 AAAACAGACTTCAAA CCGCTCTAG TATT CAAGAGCGG CTAAAACAGCAGCTA SSU05_0877 850890 - 851558 + | hypothetical protein SSU05_0878 851562 - 852302 + | hypothetical protein TERM 1057 852311 - 852336 + F 75 -5.6 -4.77567 | opp_overlap 852311 TTTATAAAACAAATA GTTTACATAA TTTATT TTGTGTAAAC TTTTATTATAAAAAT SSU05_0879 852367 - 852804 + | adenylylsulfate kinase-like kinase TERM 1058 853054 - 853027 - f 81 -3.6 -5.44119 | opp_overlap 853019 TGGACGTGAAAAAAA TTTTCTAGTTAT CTCG AAAACTAAAAAA TTATGAACAATTGAC TERM 1059 853111 - 853140 + F 100 -8.1 -5.54907 | opp_overlap 853111 853115 ACTGAGATAGAAGCA TAAAGTACATTCT TCAA AAAATGTACTTTA TTTTTATTTTGTACA TERM 1060 853140 - 853111 - f 77 -10.3 -2.92265 | opp_overlap 853111, overlap 853115 ACTGAGATAGAAGCA TAAAGTACATTCT TCAA AAAATGTACTTTA TTTTTATTTTGTACA TERM 1061 853136 - 853115 - f 70 -6.7 -4.13 | opp_overlap 853111, overlap 853111 AGATAGAAGCATAAA GTACATTCT TCAA AAAATGTAC TTTATTTTTATTTTG TERM 1062 853892 - 853878 - f 71 -4.2 -4.85433 | overlap 853879 AGAGAAATTTAAAAA GCAGCT CAA AGCTGA ATTGAAAAGAACAAC SSU05_0880 853894 - 854415 + | hypothetical protein TERM 1063 854515 - 854485 - f 81 -8.5 -4.2602 | opp_overlap 854484 854490, overlap 854490 CATATTAAGAAATAA TAAAACAGGTCTA AAGTA TAGATCTGTTTTA AATTTATGTAAAAAA TERM 1064 854510 - 854490 - f 74 -4 -5.08731 | opp_overlap 854484 854490, overlap 854485 TAAGAAATAATAAAA CAGGTCTA AAGTA TAGATCTG TTTTAAATTTATGTA TERM 1065 854490 - 854510 + F 73 -6.2 -4.41177 | opp_overlap 854490 854485, overlap 854484 TAAGAAATAATAAAA CAGGTCTA AAGTA TAGATCTG TTTTAAATTTATGTA TERM 1066 854540 - 854561 + F 75 -7.4 -4.35518 | AAAAAATGGGGGTAT CTCTATGT CCGAAA ACATAGAG TTTTAGTATCAAATT TERM 1067 854594 - 854610 + F 76 -5.9 -4.61747 | overlap 854595 CTAGAAAAATGTACT TTGGAAA AAA TTTCCAG TTTTGTCGTTATTAA TERM 1068 854643 - 854656 + F 74 -2.5 -5.3671 | overlap 854643 854648 TACATTTTTAGCTGA TTTTT CCTA AAAAA TTTTTTGGTTATCTT xerS 854771 - 855844 + | site-specific tyrosine recombinase XerS TERM 1069 855878 - 855899 + T 76 -4.4 -5.10767 | opp_overlap 855878 855874 ATGTAAATAAATTAA GGAGTAAG CGAAAA CTTACCCC TTTTTCTCTTAAATC SSU05_0882 857422 - 855914 - | phosphomannomutase TERM 1070 856146 - 856136 - G 71 -6.8 -4.19735 | opp_overlap 856136 TGGGTTAAAAGCAAA GCCT TCG AGGC TGGTTTGGCGGAGGT TERM 1071 857506 - 857489 - R 81 -4.1 -5.46698 | TTCAAAATGAAAAAA GCACAGC TTCT ACTGTAC TTTTGTAATGCTTAC SSU05_0883 858440 - 857475 - | Signal transduction histidine kinase SSU05_0884 858889 - 858437 - | response regulator SSU05_0885 859110 - 858886 - | response regulator TERM 1072 859120 - 859139 + r 80 -10 -3.61062 | opp_overlap 859120 CTTCATTCTGCAAAA GCCAGGAC ACAG GTCTTGGC TTATATACTTCCATT TERM 1073 859139 - 859120 - R 76 -7.8 -4.09685 | opp_overlap 859120 CTTCATTCTGCAAAA GCCAGGAC ACAG GTCTTGGC TTATATACTTCCATT SSU05_0886 859397 - 859140 - | cytotoxic translational repressor of toxin-antitoxin stability system SSU05_0887 859617 - 859381 - | hypothetical protein TERM 1074 859724 - 859692 - R 100 -12.8 -4.57073 | opp_overlap 859699 859700, overlap 859693 CATTTCCCTGAAAAA GGCAGAAATCTCGC ACAAG GCGAGACTTCTGCT ACCGTTCAATAATGC TERM 1075 859723 - 859693 - R 100 -16.3 -3.33922 | opp_overlap 859699 859700, overlap 859692 ATTTCCCTGAAAAAG GCAGAAATCTCGC ACAAG GCGAGACTTCTGC TACCGTTCAATAATG SSU05_0888 860854 - 859754 - | peptide ABC transporter permease SSU05_0889 861285 - 861109 - | peptide ABC transporter permease SSU05_0890 861698 - 861285 - | peptide ABC transporter permease SSU05_0891 862451 - 861699 - | peptide ABC transporter ATPase SSU05_0892 863321 - 862587 - | putative bacteroiocin operon protein SSU05_0893 864069 - 863323 - | hypothetical protein SSU05_0894 864973 - 864071 - | ABC-type multidrug transport system, ATPase component TERM 1076 864767 - 864781 + g 80 -2.8 -5.5112 | overlap 864769 ATTTAGGTATTTTTT GTCATT TCG AATGTC TTTTTTATTAATAAA SSU05_0895 865371 - 864994 - | hypothetical protein TERM 1077 865621 - 865606 - R 83 -6.2 -5.14563 | GTTCTGATTAAAAAA CTTACA GCTT TGTAAG GAAAGAATAAAAGAC TERM 1078 865651 - 865634 - R 89 -7.7 -5.03961 | opp_overlap 865636 AAGGAAAGAATAAAA GACACCA TTTC TGGCGTC TTACAGTTAGTTTTA SSU05_0896 866830 - 865664 - | carbamoylphosphate synthase large subunit SSU05_0897 867594 - 866848 - | hypothetical protein SSU05_0898 868452 - 867625 - | alpha/beta superfamily hydrolase TERM 1079 868494 - 868514 + r 78 -7.7 -4.2181 | GTATTATATCATAGT TTTTCTGGA ATA TTCAGAAAA TTTAGTTATTTATTT SSU05_0899 869609 - 868566 - | hypothetical protein TERM 1080 869627 - 869612 - R 100 -9 -4.75289 | opp_overlap 869614 CAGTATAACACAAAA GACACC CGAA GGTGTC CTGTACATTATGCTT SSU05_0900 870474 - 869635 - | hypothetical protein SSU05_0901 871882 - 870548 - | tRNA (uracil-5-)-methyltransferase Gid TERM 1081 872028 - 871991 - R 76 -10.1 -2.94563 | opp_overlap 871998 872013, overlap 871993 871998 AAAATGGCTAGAAAG GACAAAACTACCTTCAT TGAA ATGAAAGTAGTTTCACC TTTTTACATAATATA TERM 1082 872026 - 871993 - R 70 -9.1 -3.0169 | opp_overlap 871998 872013, overlap 871991 871998 AATGGCTAGAAAGGA CAAAACTACCTTCAT TGAA ATGAAAGTAGTTTCA CCTTTTTACATAATA TERM 1083 872021 - 871998 - R 90 -9 -4.64846 | opp_overlap 871998 872013, overlap 871993 871991 CTAGAAAGGACAAAA CTACCTTCAT TGAA ATGAAAGTAG TTTCACCTTTTTACA SSU05_0902 872827 - 872078 - | HAD superfamily hydrolase TERM 1084 872927 - 872907 - R 95 -7.6 -5.3671 | opp_overlap 872907 AATAGAACGAAAAAA CCTACCAC ATTAA GTGATAGG TTTTTATTTTGATTG TERM 1085 872907 - 872927 + r 88 -5.4 -5.54338 | opp_overlap 872907 AATAGAACGAAAAAA CCTACCAC ATTAA GTGATAGG TTTTTATTTTGATTG SSU05_0903 874223 - 873012 - | phage integrase family site specific recombinase TERM 1086 874213 - 874254 + g 76 -9.7 -3.34089 | gap 1, overlap 874211 874214 CTTTTTGTTGCCATT TGGATTCTCACTTTCTAAAT GTT ATTTAGATAGTG-GAATCCC TATTAATTGTTCCAC TERM 1087 874214 - 874253 + g 91 -13.2 -2.59971 | gap 1, overlap 874213 874211 TTTTTGTTGCCATTT GGATTCTCACTTTCTAAAT GTT ATTTAGATAGTG-GAATCC CTATTAATTGTTCCA SSU05_0904 874461 - 874234 - | hypothetical protein TERM 1088 874740 - 874694 - R 80 -6.7 -4.86861 | gap 1, opp_overlap 874694 CAACAAATAAATAAA GTCCCACCTAGAATTATTCAAT TGTC AATGAACAAATC-AGGAGGGAC TATTTTTTATTTTTT SSU05_0905 874961 - 874740 - | Cro/CI family transcriptional regulator TERM 1089 875011 - 875031 + r 88 -7.7 -4.8048 | overlap 875012 GAACGAATCTTAGTT TTTATTCCA AAT TGGAATAAG TTTTTGATATAGACA TERM 1090 875012 - 875030 + r 75 -9 -3.47806 | overlap 875011 AACGAATCTTAGTTT TTATTCCA AAT TGGAATAA GTTTTTGATATAGAC SSU05_0906 876392 - 875685 - | NisK SSU05_0907 877060 - 876377 - | NisR SSU05_0908 877744 - 877091 - | hypothetical protein SSU05_0909 878593 - 877796 - | hypothetical protein TERM 1091 877843 - 877829 - G 78 -7.2 -4.56775 | ATCTTCCTTCAAAAA TTTGCA ATA TGCAAA GCCACTAATTACTAG TERM 1092 878149 - 878139 - G 74 -6.8 -4.258 | opp_overlap 878138 TTATTCAGTAACAAA GGGT TCA ACCC CTCTCTTCCTAAACC SSU05_0910 879293 - 878577 - | putative transport ATP-binding protein SSU05_0911 881536 - 879314 - | ABC transporter, NBP/MSD fusion protein SSU05_0912 882948 - 881803 - | putative asparagine synthetase TERM 1093 883608 - 883560 - R 100 -7.8 -5.93252 | opp_overlap 883564 CTCAAAAATAAAAAA CAAAGTATCTCGATATTCGT AGTTCTGGA ATGAATATCGAAATACTTTA TTCAAAATTATTTAC TERM 1094 883564 - 883604 + r 73 -6.4 -4.18702 | opp_overlap 883560 AAAATAAAAAACAAA GTATCTCGATATTCGT AGTTCTGGA ATGAATATCGAAATAC TTTATTCAAAATTAT TERM 1095 883838 - 883855 + r 77 -8.5 -3.97057 | opp_overlap 883826 AAATGAAAATATTTT TCAAGAG ATAT CTCTTGA TTTAATTAAATTCTA TERM 1096 884454 - 884433 - R 73 -8.8 -3.35467 | opp_overlap 884433 CTGATAAATGATTAA CACTCAGT ATTTCA ACTGAGTG TTTTTTTAGTATAGT TERM 1097 884433 - 884454 + r 100 -8.8 -5.59357 | opp_overlap 884433 CTGATAAATGATTAA CACTCAGT ATTTCA ACTGAGTG TTTTTTTAGTATAGT SSU05_0913 886325 - 884460 - | chromosome segregation ATPase TERM 1098 884712 - 884733 + g 100 -7.3 -5.64006 | overlap 884713 ATTGACTAAGACTTC TGCCATCTT ATTT AAGGTGGCG TTTTTTTCGTTGAGT TERM 1099 884713 - 884732 + g 77 -8.6 -3.96777 | overlap 884712 TTGACTAAGACTTCT GCCATCTT ATTT AAGGTGGC GTTTTTTTCGTTGAG TERM 1100 885674 - 885686 + g 77 -4.8 -5.0133 | opp_overlap 885674 AGTCAATAGTCAAAT GCAG CTGCT CTGC TTTTTTCAAAAAGTC SSU05_0914 886677 - 886312 - | hypothetical protein SSU05_0915 887252 - 886677 - | hypothetical protein TERM 1101 886881 - 886907 + g 70 -3.7 -4.84017 | opp_overlap 886873, overlap 886884 CCATAGAGAAGACCA GGTCTCCAAAA TGTCT TTTTGGCGGTC TTTTTGTAACAAGTT TERM 1102 887229 - 887179 - G 100 -10.7 -4.67556 | gap 1, opp_overlap 887179, overlap 887182 ACAATATCCCAAAAA TCATATCGCCAGCTGACTAAAACT CTCC AGTTTT-GACAGCTAACGATAAGA TAATTTGGTGGCCCC TERM 1103 887226 - 887182 - G 81 -11 -3.25567 | gap 1, opp_overlap 887179, overlap 887179 ATATCCCAAAAATCA TATCGCCAGCTGACTAAAACT CTCC AGTTTT-GACAGCTAACGATA AGATAATTTGGTGGC TERM 1104 887253 - 887233 - G 84 -9.7 -3.79995 | CTAACGATAAGATAA TTTGGTGGC CCC GCCCCCAAA CCCCCAGTAGAAAAT SSU05_0916 887407 - 888303 + | putative Abi-alpha protein TERM 1105 888429 - 888449 + T 77 -8.3 -3.96841 | opp_overlap 888429 888433 CATTTGTACTACTAA GCAACAAGA CGC TCCTGTTGC TTCTCTTTATTCAAG TERM 1106 888449 - 888429 - T 79 -10.5 -3.21416 | opp_overlap 888429, overlap 888433 CATTTGTACTACTAA GCAACAAGA CGC TCCTGTTGC TTCTCTTTATTCAAG SSU05_0917 889642 - 888425 - | Tn916, transposase TERM 1107 889386 - 889398 + g 74 -4.1 -4.93877 | TGTTTTGCGTAAAGC TGGCA GAG TGTCA TTTTCTTTCCTACAA SSU05_0918 889927 - 889724 - | hypothetical protein TERM 1108 890382 - 890329 - R 73 -6.1 -4.44667 | gap 1, opp_overlap 890329, overlap 890325 890330 TGGTGGAATAACAAA CCTCCCTGTTCG-GGAAGCGTG GAATGGTTTAG CACGCTTCCACGAAAGGAGAGA GGATATTACTTAATT SSU05_0919 891046 - 890615 - | hypothetical protein TERM 1109 891178 - 891211 + H 71 -6.9 -3.88971 | opp_overlap 891178, overlap 891173 TGAATAGCCAAAAAA GCATATAAACAGA TTTATTTC TCTGTTTACATGC TTCTGTTATTCTATC TERM 1110 891211 - 891178 - H 100 -9.1 -5.1615 | opp_overlap 891178 891173 TGAATAGCCAAAAAA GCATATAAACAGA TTTATTTC TCTGTTTACATGC TTCTGTTATTCTATC TERM 1111 891254 - 891243 - H 73 -5.8 -4.44245 | ATATGATTTATAAAA CCAC ATTG GTGG ACGTACTTATCTATT TERM 1112 891695 - 891685 - g 71 -4.6 -4.71418 | AATATTGAAAATAAA GGGC AAC ACCC CAGCATACAAGTTCT SSU05_0920 891541 - 891894 + | Tn916, transcriptional regulator, putative TERM 1113 891916 - 891969 + TF 100 -13.5 -3.72141 | gap 1, opp_overlap 891904 891921 891933, overlap 891917 891918 891933 GAATCCATACATAAC GG-AAAGAGCCGATAAAATGAGATTG TAT TAATCTCATTTTATCGGCTCTGCGTC TTTGCGTCTGGCTCT TERM 1114 891917 - 891967 + TF 100 -15 -3.4404 | opp_overlap 891904 891921 891933, overlap 891916 891918 891933 AATCCATACATAACG GAAAGAGCCGATAAAATGAGATTG TAT TAATCTCATTTTATCGGCTCTGCG TCTTTGCGTCTGGCT TERM 1115 891918 - 891966 + TF 100 -18.5 -2.65942 | opp_overlap 891921 891933, overlap 891917 891916 891933 ATCCATACATAACGG AAAGAGCCGATAAAATGAGATTG TAT TAATCTCATTTTATCGGCTCTGC GTCTTTGCGTCTGGC TERM 1116 891963 - 891921 - Tf 100 -23.9 -3.84394 | opp_overlap 891918 891917 891916 891933, overlap 891933 CATACATAACGGAAA GAGCCGATAAAATGAGATT GTATT AATCTCATTTTATCGGCTC TGCGTCTTTGCGTCT TERM 1117 891933 - 891951 + TF 76 -6.8 -4.41548 | opp_overlap 891921 891933, overlap 891918 891917 891916 AAAGAGCCGATAAAA TGAGATTG TAT TAATCTCA TTTTATCGGCTCTGC TERM 1118 891951 - 891933 - Tf 73 -6.1 -4.43221 | opp_overlap 891933 891918 891917 891916, overlap 891921 AAAGAGCCGATAAAA TGAGATT GTATT AATCTCA TTTTATCGGCTCTGC SSU05_0922 894174 - 892240 - | translation elongation factor (GTPases) TERM 1119 893114 - 893167 + Gg 79 -8.3 -4.12532 | gap 1, overlap 893119 TTGCTCGGTTCAACA GTTGTTTGCAGCAGAGGGAGCGGATT TTC AATTCTCTCTCTCTGTGGC-AATAGC TTTGTATCTCCAAGA TERM 1120 893119 - 893163 + Gg 93 -13.7 -2.74987 | overlap 893114 CGGTTCAACAGTTGT TTGCAGCAGAGGGAGCGGATT TTC AATTCTCTCTCTCTGTGGCAA TAGCTTTGTATCTCC SSU05_0921 893067 - 893219 + | hypothetical protein TERM 1121 893793 - 893804 + gT 70 -5.8 -4.28548 | opp_overlap 893791 TGATAAAAAAGATTG TGGG AATC CCCA TTTTCCTAAGTGCAT TERM 1122 894200 - 894229 + Tr 100 -16.7 -4.87665 | opp_overlap 894200 AAAAGGGCATAAAAA TCCCAGTGATAAA TACT TTTATCACTGGGA TTTTTATGCATAACC TERM 1123 894229 - 894200 - TR 100 -16.7 -4.90296 | opp_overlap 894200 AAAAGGGCATAAAAA TCCCAGTGATAAA TACT TTTATCACTGGGA TTTTTATGCATAACC TERM 1124 894527 - 894492 - TR 100 -12.2 -4.7254 | gap 1, opp_overlap 894491 894486 894492, overlap 894494 ATTTTTTATCAAAAA GAGTACATGATTACAAA GTA TCTGTAATCATGTAC-C AATATTTGTTATTTT TERM 1125 894526 - 894494 - TR 100 -15.9 -3.98256 | opp_overlap 894492 894491 894486, overlap 894492 TTTTTATCAAAAAGA GTACATGATTACAAA GTA TCTGTAATCATGTAC CAATATTTGTTATTT SSU05_0923 895468 - 894536 - | Tn916 hypothetical protein SSU05_0924 896466 - 895465 - | hypothetical protein SSU05_0925 898640 - 896463 - | hypothetical protein TERM 1126 896804 - 896828 + g 75 -8.7 -3.6707 | opp_overlap 896804 TCGGTCTTTCATGAA CAGAAGAAGCA GGC TGTTTTTTCTG TTTGACCTGTTCCAT TERM 1127 896840 - 896866 + g 75 -5.8 -4.7339 | TCTGTTTGACCTGTT CCATTTCAGAGC GAC GCTTCGCAATGG TTTTTCGCCTTTGTT TERM 1128 898579 - 898544 - G 90 -5.6 -5.45802 | gap 1, opp_overlap 898544 898543, overlap 898538 TGGCTAAAAGAAAAA TGGCAATCACAAGTG TGAAAGC CACT-GTCATTGCCA CTTTACCTAGACGTT SSU05_0926 901099 - 898643 - | hypothetical protein SSU05_0927 901580 - 901074 - | hypothetical protein TERM 1129 901318 - 901290 - GR 100 -11.7 -3.91434 | opp_overlap 901281 AAAGTATTTGAGAAA TGCTCCCTCTATC ATG GAAAGAGGGGGCA AGTTGCCAAGTATCA TERM 1130 901517 - 901490 - GR 90 -7.1 -5.24129 | gap 1, overlap 901492 TCCTTTCATAAAAAA TA-GGGGTAGCT GATTG AGCCACCCCGTA AAATAGAAAATCTGC TERM 1131 901514 - 901492 - GR 100 -11.3 -4.25873 | overlap 901490 CTTTCATAAAAAATA GGGGTAGCT GATTG AGCCACCCC GTAAAATAGAAAATC TERM 1132 901553 - 901528 - GR 80 -6.2 -4.89567 | CCGTAAAATAGAAAA TCTGCCAGTA GTAATG TACCGACAGA TTTAATAGACGATTT SSU05_0928 902052 - 901555 - | hypothetical protein TERM 1133 902112 - 902162 + r 83 -7 -4.86731 | ACTTCGTTTGGTGTA CCATTCCTTTGCGGAACATAAG AAAACCA CTTATATTCCACAAAAGAACGG TTTTATTTAAGCACC SSU05_0929 902390 - 902169 - | hypothetical protein SSU05_0930 903638 - 902433 - | Tn916, transcriptional regulator, putative TERM 1134 903755 - 903775 + r 78 -10.4 -3.09834 | CCTGTCGATTTGTAC CCCCCTGT TAGAT ACGGGGGG TTAAGTGCTGGCGTG TERM 1135 903810 - 903868 + r 79 -10.3 -3.11966 | gap 2, opp_overlap 903814, overlap 903817 903819 TTGCCACACCAGCCA GCAAGATCAGTCCACACCTGCGACTTCCG CTT CGCACGTCGCCTGCGTGGACTG-TC-TGC TGTTGGATAACTTTT TERM 1136 903865 - 903814 - R 90 -13 -3.1994 | gap 1, opp_overlap 903810 903817 903819 CACACCAGCCAGCAA GATCAGTCCACACCTGCGACTTCCG CTT CGCACGTCGCCTGCGTGGACTG-TC TGCTGTTGGATAACT TERM 1137 903817 - 903863 + r 100 -13.6 -2.92522 | opp_overlap 903814, overlap 903810 903819 ACCAGCCAGCAAGAT CAGTCCACACCTGCGACTTCCG CTT CGCACGTCGCCTGCGTGGACTG TCTGCTGTTGGATAA TERM 1138 903819 - 903861 + r 78 -10.4 -3.0119 | opp_overlap 903814, overlap 903817 903810 CAGCCAGCAAGATCA GTCCACACCTGCGACTTCCG CTT CGCACGTCGCCTGCGTGGAC TGTCTGCTGTTGGAT SSU05_0931 905201 - 903816 - | hypothetical protein SSU05_0932 905616 - 905230 - | hypothetical protein SSU05_0933 905946 - 905632 - | hypothetical protein TERM 1139 906103 - 906077 - R 100 -10.3 -5.41746 | AATCGGGTAAAAAAA TAGACACCTCA TTTTT TGAAGTGTCTA CCTATTAAATATTCA TERM 1140 906646 - 906698 + r 74 -8.2 -3.81146 | gap 2, opp_overlap 906648 906651, overlap 906651 TACTCAAACATGCAA T-A-TAAGGCATAGGAATTAGTTTAT TTA AAAAACAAATTCCTATGCCTTAATCA TTATTAATTACCAAC TERM 1141 906694 - 906648 - R 100 -18.4 -3.182 | opp_overlap 906646 906651, overlap 906651 CTCAAACATGCAATA TAAGGCATAGGAATTAGTTTAT TTA AAAAACAAATTCCTATGCCTTA ATCATTATTAATTAC TERM 1142 906691 - 906651 - R 100 -15.7 -3.7212 | opp_overlap 906646 906651, overlap 906648 AAACATGCAATATAA GGCATAGGAATTAGTTTAT TTA AAAAACAAATTCCTATGCC TTAATCATTATTAAT TERM 1143 906651 - 906691 + r 100 -15.7 -3.33573 | opp_overlap 906651 906648, overlap 906646 AAACATGCAATATAA GGCATAGGAATTAGTTTAT TTA AAAAACAAATTCCTATGCC TTAATCATTATTAAT TERM 1144 907001 - 906985 - R 72 -8.1 -3.55444 | TTTTCACCCTTGAAA CTAGATA CTA TATCTAG CCATTCACCCTTGTG SSU05_0934 908550 - 907006 - | DNA helicase SSU05_0935 910594 - 908507 - | hypothetical protein TERM 1145 910343 - 910301 - GR 81 -7.1 -4.58685 | gap 1, opp_overlap 910308 AAAGTGTTCGAAAAA TGATGGAATGGCTGG-ACTG TAAG CAGTTCCATCCAGTTCATCA AACTCAAAAATAGTT SSU05_0936 911367 - 910591 - | Signal recognition particle GTPase SSU05_0937 911873 - 911367 - | transcriptional regulator TERM 1146 911888 - 911919 + r 100 -17.4 -4.86939 | opp_overlap 911888 TTATACCATAAAAAA CGGATAACGCACCA TATT TGGTGCGTTAGCCG TTTTTAGGTTTCTTC TERM 1147 911919 - 911888 - R 100 -17.4 -5.34555 | opp_overlap 911888 TTATACCATAAAAAA CGGATAACGCACCA TATT TGGTGCGTTAGCCG TTTTTAGGTTTCTTC SSU05_0938 912266 - 911913 - | ATPases with chaperone activity, ATP-binding subunit TERM 1148 912248 - 912228 - G 100 -9 -4.64766 | opp_overlap 912228 CTTACATTGTAAAAA GGTAGCCC GCATA GGACTACC TGACTTATAAATCAT SSU05_0939 912642 - 912253 - | methyl-accepting chemotaxis protein SSU05_0940 912866 - 912639 - | hypothetical protein SSU05_0941 913996 - 912920 - | DNA primase (type) TERM 1149 913098 - 913108 + g 74 -4 -5.03145 | ACGATTGGAAGTCCT TTGT CTA ACAA TTTTTTACAAAATTC TERM 1150 914035 - 914017 - R 100 -9.6 -5.14563 | opp_overlap 914017 CTCCCTATCAAAAAA GCAGAAGA CTG TCTCCTGC TAGTTGTTCTCACTT SSU05_0942 914673 - 914035 - | hypothetical protein TERM 1151 915124 - 915173 + r 70 -6.5 -4.13767 | opp_overlap 915126, overlap 915125 TTTGAGTATATAAAA AAGTTCCATAAGACCTCCCTAAT CATC ATTAGGAAGTGCTTATGGAACAA TTTTAGAATACCACA TERM 1152 915125 - 915172 + r 76 -10 -3.08046 | opp_overlap 915126, overlap 915124 TTGAGTATATAAAAA AGTTCCATAAGACCTCCCTAAT CATC ATTAGGAAGTGCTTATGGAACA ATTTTAGAATACCAC TERM 1153 915171 - 915126 - R 100 -15.7 -5.39721 | opp_overlap 915125 915124 TGAGTATATAAAAAA GTTCCATAAGACCTCCCTAAT CATC ATTAGGAAGTGCTTATGGAAC AATTTTAGAATACCA SSU05_0943 916673 - 916074 - | DNA-binding response regulator, putative SSU05_0944 917841 - 916651 - | two-component sensor histidine kinase TERM 1154 917393 - 917367 - G 70 -3.8 -4.90471 | ACTGAAAATATAAAA TAATTGTTATCG TTT CAAGAACAACTA GACTAGTTCTCTTTA SSU05_0945 918852 - 918568 - | hypothetical protein SSU05_0946 920471 - 919557 - | hypothetical protein SSU05_0947 921546 - 920443 - | ABC-type multidrug transport system, ATPase and permease component TERM 1155 920986 - 920966 - GR 70 -7.7 -3.57615 | CTAATACTTTGTAAA CCTAGTAAA ATT TTTACTAAG GAGGTTTTGCCGGTA SSU05_0948 922372 - 921488 - | cytolysin B transport protein SSU05_0949 923637 - 922525 - | lantibiotic modifying enzyme SSU05_0950 923737 - 923856 + | hypothetical protein SSU05_0951 923964 - 924461 + | DNA recombinase, putative SSU05_0952 924462 - 924878 + | recombinase SSU05_0953 924880 - 926442 + | DNA recombinase, putative TERM 1156 926460 - 926486 + F 100 -12.4 -5.18643 | opp_overlap 926460 926459 ACCAGAAGTAAATAG CCCATGACTCTA CAG TAGAGTTGTGGG TTTTCTTTTGCTTGC SSU05_0954 926585 - 926809 + | hypothetical protein TERM 1157 927037 - 927027 - g 73 -5.4 -4.60808 | TGATAAAAATAGAAA CAAC CTT GTTG TGCCTCCCGGAGCGT SSU05_0955 926824 - 927693 + | hypothetical protein SSU05_0956 927674 - 928408 + | hypothetical protein SSU05_0957 928441 - 929304 + | putative aminoglycoside 6-adenylyltansferase SSU05_0958 929348 - 929875 + | putative adenine phosphoribosyltransferase TERM 1158 929998 - 929985 - f 72 -8.1 -3.56594 | opp_overlap 929980 929985 TGAAACCGTCTGAAA CTGCC TAAC GGCAG TCTGATAATTACTTT SSU05_0959 930103 - 931422 + | putative transposase SSU05_0960 933008 - 931611 - | SalB SSU05_0961 934215 - 933916 - | hypothetical protein SSU05_0962 941110 - 934286 - | SNF2 family protein TERM 1159 936697 - 936709 + g 78 -5.5 -5.06816 | ACCCTACCTCATGGG CGAGT AGA GCTCG TTTTTCTTCCACAAT TERM 1160 939246 - 939257 + g 71 -3 -5.00616 | GAAGCATTGCGGTGC TCTA CTTC TAGA TTTTTTACCAAACGA TERM 1161 941052 - 941042 - G 75 -3.2 -5.0916 | TTGGTAATATAAAAA CGCT TCA AGCA AGGCTCTATCACGAG TERM 1162 941131 - 941153 + r 81 -8.4 -4.2586 | opp_overlap 941132, overlap 941132 CCTCCCATTTTAAAA AGGCTGAGAG TGT TTCTCAGCCC TTTGTGTTAATCTAG TERM 1163 941152 - 941132 - R 95 -11.2 -4.62069 | opp_overlap 941131 941132 CTCCCATTTTAAAAA GGCTGAGA GTGTT TCTCAGCC CTTTGTGTTAATCTA TERM 1164 941132 - 941152 + r 87 -11.9 -3.14793 | opp_overlap 941132, overlap 941131 CTCCCATTTTAAAAA GGCTGAGAG TGT TTCTCAGCC CTTTGTGTTAATCTA SSU05_0963 941714 - 941160 - | hypothetical protein SSU05_0964 941886 - 941695 - | hypothetical protein SSU05_0965 946839 - 941887 - | agglutinin receptor TERM 1165 946684 - 946704 + g 79 -3.2 -5.27779 | overlap 946686 CATGGTTCCAAGGGC AACCGAGC AAAGG GTTCGGTA TTTTTTACTCTTACG TERM 1166 946686 - 946702 + g 70 -5.8 -4.26398 | overlap 946684 TGGTTCCAAGGGCAA CCGAGC AAAGG GTTCGG TATTTTTTACTCTTA TERM 1167 946938 - 946890 - H 100 -19.3 -5.10933 | TCAGGGAAAAGAAAA TGTTGCTTTTACACTACAAATGT TAT AAAATTGTAGTGTAAAAGCAACA TAGAAAGGAGTAAGC SSU05_0966 946954 - 947544 + | transcriptional regulator TERM 1168 948321 - 948311 - g 71 -6.8 -4.0827 | ATATAGCTATACAAA GGGA ATT TCCC TTGCAGATGTTCTTG SSU05_0967 947541 - 948386 + | hypothetical protein TERM 1169 948408 - 948444 + T 100 -9.7 -5.68438 | opp_overlap 948408 CCAAAAAATAAAAAA GGATATGCTAACA TTTATACATTT TGTTAGCATATCC TTTTTTATTTCGTCG TERM 1170 948444 - 948408 - T 100 -9.7 -6.04324 | opp_overlap 948408 CCAAAAAATAAAAAA GGATATGCTAACA TTTATACATTT TGTTAGCATATCC TTTTTTATTTCGTCG SSU05_0968 951250 - 948449 - | Tn5252, Orf28 TERM 1171 950371 - 950357 - G 71 -5 -4.614 | opp_overlap 950357 CGCAATGACAGAAAA GAAAGT CAT ACTTCC CTTAATGGCTTGGAC TERM 1172 951110 - 951130 + g 70 -2.5 -5.00884 | overlap 951114 AAACAGAGAATTTTT GGCTGATTT TCG AAATCTTCC TTTTTTAGGAACAGT SSU05_0969 953603 - 951252 - | Type IV secretory pathway, VirB4 component SSU05_0970 954015 - 953560 - | hypothetical protein TERM 1173 953974 - 953946 - GR 73 -3.7 -4.94222 | overlap 953948 AATAAGCTATAAAAA GAGGAGGCGGGCA ATT TACTCCCATCCTC CTACATCCCCAAAAT SSU05_0971 954829 - 953975 - | ABC-type cobalt transport system, permease component CbiQ and related transporters TERM 1174 954053 - 954037 - GR 73 -8.7 -3.46813 | overlap 954035 954050 CAATGATTAACAATA TGGCCTG TAC CAAGCCA CCAAACATAATGGCG SSU05_0972 955069 - 954848 - | hypothetical protein SSU05_0973 956926 - 955109 - | Type IV secretory pathway, VirD4 component TERM 1175 955296 - 955285 - G 73 -5.8 -4.56597 | TCTTGGTTCGAAAAA CAGG AACC CCTG CAATGCGTACAAGAC SSU05_0974 957495 - 956926 - | hypothetical protein TERM 1176 957478 - 957454 - G 72 -7.9 -3.81488 | opp_overlap 957450 957454 957455, overlap 957455 CCCTCTCAAACATAA GGTGTTTCCAT AAT ACGGAAACACT CTTGATTTTGGTATC TERM 1177 957455 - 957477 + g 76 -9.2 -3.44148 | opp_overlap 957455 957454, overlap 957454 957450 CCTCTCAAACATAAG GTGTTTCCAT AAT ACGGAAACAC TCTTGATTTTGGTAT TERM 1178 957477 - 957455 - G 81 -11.4 -2.88571 | opp_overlap 957454 957450 957455, overlap 957454 CCTCTCAAACATAAG GTGTTTCCAT AAT ACGGAAACAC TCTTGATTTTGGTAT SSU05_0975 958082 - 957492 - | protease, putative TERM 1179 957784 - 957762 - G 82 -3.4 -5.42164 | opp_overlap 957772 CAGAAACAATAAAAA GATAACATGT GGA ACTTGTTTTC CTACTTGTAACAAGA SSU05_0976 958318 - 958079 - | hypothetical protein SSU05_0977 958710 - 958321 - | arsenate reductase SSU05_0978 959143 - 958715 - | hypothetical protein SSU05_0979 960482 - 959127 - | C-5 cytosine-specific DNA methylase TERM 1180 959755 - 959771 + g 74 -4.3 -4.96762 | TGATTGTCCTTAAGT CGACGAC CAT GTTGCCG TTTTTCTAGTCTATC TERM 1181 960205 - 960195 - G 75 -3.2 -5.10029 | overlap 960185 AGCAATCTCAAAAAA GAGA GTC CCTC GAGTATCTTCAAATC TERM 1182 960529 - 960508 - R 89 -5.9 -5.26875 | TTTCCAACTAAAAAA GAGCCTTAC ACTT GTAAAACTC TTGCTTATATATGAT SSU05_0980 960638 - 960534 - | hypothetical protein SSU05_0981 961449 - 960631 - | hypothetical protein SSU05_0982 961631 - 961446 - | hypothetical protein TERM 1183 961669 - 961644 - R 100 -11.2 -5.61824 | CAAAACGCAAAAAAA GGGGCAGACA ATTTAA TGTCTACCCC GAAAATTTATTAAAA TERM 1184 961715 - 961691 - R 100 -13 -5.50723 | opp_overlap 961691 TTATTAAAACAAAAA TCCTGCCAAA GAATT TTTGGCAGGA TTTTTGGCAGGAAAC TERM 1185 961691 - 961715 + r 100 -13.7 -4.56597 | opp_overlap 961691 TTATTAAAACAAAAA TCCTGCCAAAG AAT TTTTGGCAGGA TTTTTGGCAGGAAAC SSU05_0983 962183 - 961818 - | ribosomal protein L7/L12 SSU05_0984 962779 - 962249 - | ribosomal protein L10 TERM 1186 962806 - 962785 - R 85 -3.7 -5.64274 | CTAGGCACAAAAAAA TCGCACCTA AACC TAGACACGA AAGTACAAATACGTT TERM 1187 963049 - 963065 + r 78 -9.5 -3.49668 | AACACGAATTGCTGT GATTTGC TTC GCAAATC TTATCTCCAACCTTT TERM 1188 963239 - 963225 - R 83 -8.6 -4.2354 | opp_overlap 963225, overlap 963222 963230 TAAAGTTGAAAATAA GGAAAC GAA GTTTCC TCGCTTGTCGAAGTA TERM 1189 963315 - 963286 - R 91 -6.5 -5.32882 | opp_overlap 963289, overlap 963289 CATGACTATAAAAAA CAACTGCCATTCC CTTG AGAATAGCAGTTT AATCTTATTTAATCT TERM 1190 963312 - 963289 - R 95 -8.2 -4.74611 | opp_overlap 963289, overlap 963286 GACTATAAAAAACAA CTGCCATTCC CTTG AGAATAGCAG TTTAATCTTATTTAA SSU05_0985 965461 - 963320 - | DNA topoisomerase I SSU05_0986 965652 - 965515 - | Rossmann fold nucleotide-binding protein involved in DNA uptake SSU05_0987 965970 - 965671 - | Rossmann fold nucleotide-binding protein involved in DNA uptake SSU05_0988 966443 - 965967 - | Rossmann fold nucleotide-binding protein involved in DNA uptake TERM 1191 966252 - 966272 + gr 73 -2.5 -5.1356 | overlap 966255 TACAGCGACATTTCG CAAGGTCAA TTT TTTACCGTG TTTTTCTTGATAGGC TERM 1192 966414 - 966399 - GR 90 -4 -5.67283 | opp_overlap 966388 AAGGCAAAGAAAAAA TTCTCC CGAA GAAGAA TTATTTTTTAGGTAT SSU05_0989 966972 - 966415 - | acetyltransferase SSU05_0990 967243 - 966983 - | hypothetical protein TERM 1193 967202 - 967214 + g 76 -7.7 -4.16121 | overlap 967187 967186 GAGCTGACCTTCGGC CCGTT TCA AACGG TTTATCATCTTTTTC SSU05_0991 967308 - 967673 + | rhodanese-related sulfurtransferase TERM 1194 968299 - 968313 + G 70 -5.7 -4.25104 | CGAGGTTATCACTGG GCAGT CTGTT ACTGC TTTTCATGAAAAAGG SSU05_0992 967670 - 969328 + | NAD(FAD)-dependent dehydrogenase TERM 1195 969337 - 969362 + F 88 -5.5 -5.4756 | gap 1, opp_overlap 969337 ACCATAAGCAACTAA CCTTCTGTGATT TTG GGTC-CAGAAGG TTTTTTCTTGACATT SSU05_0993 969436 - 969987 + | hypothetical protein SSU05_0994 969977 - 970627 + | hypothetical protein TERM 1196 970661 - 970628 - T 78 -9.7 -3.33162 | opp_overlap 970633, overlap 970633 TACTTTATGTTATAA GAAAACAGCTTCTAG TCAC CTAGAGGCTGTTTTT AATGCATTAAACTGA TERM 1197 970633 - 970656 + T 100 -11.8 -4.77157 | opp_overlap 970628 970633 TATGTTATAAGAAAA CAGCTTCTAG TCAC CTAGAGGCTG TTTTTAATGCATTAA TERM 1198 970656 - 970633 - T 100 -9.6 -4.78237 | opp_overlap 970633, overlap 970628 TATGTTATAAGAAAA CAGCTTCTAG TCAC CTAGAGGCTG TTTTTAATGCATTAA SSU05_0995 971670 - 970660 - | hypothetical protein rnhB 972446 - 971673 - | ribonuclease HII rbgA 973284 - 972433 - | ribosomal biogenesis GTPase TERM 1199 973314 - 973333 + r 100 -6.4 -5.97979 | opp_overlap 973317, overlap 973317 TATGATTCATTGAAA AAAGCCGT AAAA ACGGCTTG TTTTTTTATTATTAT TERM 1200 973317 - 973330 + r 95 -8.1 -4.98468 | opp_overlap 973317, overlap 973314 GATTCATTGAAAAAA GCCGT AAAA ACGGC TTGTTTTTTTATTAT TERM 1201 973330 - 973317 - R 100 -8.1 -5.09895 | opp_overlap 973317 973314 GATTCATTGAAAAAA GCCGT AAAA ACGGC TTGTTTTTTTATTAT SSU05_0998 973905 - 973384 - | Fe-S-cluster oxidoreductase SSU05_0999 974586 - 973924 - | nucleotide-binding protein implicated in inhibition of septum formation TERM 1202 974607 - 974590 - R 84 -7.7 -4.65895 | opp_overlap 974590 974595, overlap 974595 TCCTCCAGTCAAAAA CAGAGTC CGAA GACCCTG TTTTCAGATGATTGA SSU05_1000 976326 - 974623 - | putative 5'-nucleotidase SSU05_1001 976810 - 976682 - | hypothetical protein TERM 1203 976862 - 976897 + r 76 -10.6 -2.61144 | opp_overlap 976866 976869, overlap 976861 976866 976869 ATGTTAAAAAGGTTC GAAATAAGCGAATTAG CTAT CTAATCCGCTCATTTC CTATTTACCAAATAC TERM 1204 976893 - 976866 - R 80 -10 -3.61889 | opp_overlap 976866 976862 976861 976869, overlap 976869 TAAAAAGGTTCGAAA TAAGCGAATTAG CTAT CTAATCCGCTCA TTTCCTATTTACCAA TERM 1205 976890 - 976869 - R 83 -9.5 -3.92832 | opp_overlap 976866 976862 976861 976869, overlap 976866 AAAGGTTCGAAATAA GCGAATTAG CTAT CTAATCCGC TCATTTCCTATTTAC pyrC 978169 - 976898 - | dihydroorotase SSU05_1003 978862 - 978209 - | uracil-DNA glycosylase SSU05_1004 979684 - 978872 - | putative glycosyltransferase SSU05_1006 979791 - 979675 - | hypothetical protein SSU05_1005 979790 - 979897 + | hypothetical protein SSU05_1007 980614 - 979856 - | orotate phosphoribosyltransferase SSU05_1008 980997 - 980671 - | hypothetical protein TERM 1206 980708 - 980720 + g 70 -2.7 -5.00136 | overlap 980709 GAATCAAAATACTGG TCAAT AAA ATTGG TTTTCTCTTTTATTT SSU05_1009 981685 - 980990 - | orotidine 5'-phosphate decarboxylase TERM 1207 981731 - 981710 - R 85 -7.3 -4.99035 | gap 1 TCATTTACACAAAAA TCCCTG-CCA AAT CGGTCAGGGA TGTGCACGAATTCAG SSU05_1010 982584 - 981850 - | putative dihydroorotate dehydrogenase B SSU05_1011 983692 - 982793 - | dihydroorotate dehydrogenase electron transfer subunit TERM 1208 983654 - 983637 - G 100 -9.9 -5.4492 | GATATAGAGAAAAAA CCTTGCT GGCT AGCAAGG TTACACGAAAAGAAG SSU05_1012 983789 - 984700 + | transcriptional regulator TERM 1209 984790 - 984766 - f 70 -6.6 -4.15543 | opp_overlap 984766 GAAAGACGTTGAAAA GAAAAATGAA AATAA TTCACTTTTC TTTAAGGAAACGCTT SSU05_1013 984864 - 985991 + | ADP-glucose pyrophosphorylase SSU05_1014 986004 - 987119 + | ADP-glucose pyrophosphorylase SSU05_1015 987128 - 988573 + | glycogen synthase TERM 1210 988602 - 988624 + F 79 -8.5 -4.09685 | gap 1, opp_overlap 988595 988593, overlap 988621 AAAATATACTGAATC GGAGTGGGAC CCTA GTCC-ACTCC TTTTCGGCAATGGAG TERM 1211 989553 - 989565 + G 72 -6.3 -4.26903 | ATTTAAAATACTGGT TGGAA TAT TTCCA TTTTGATGGCATCCG SSU05_1016 988634 - 990484 + | 1,4-alpha-glucan branching enzyme TERM 1212 990601 - 990580 - T 81 -7.3 -4.65895 | opp_overlap 990580 TTTTGCATGCAAAAA CAACCACCG TTTC CGATGATTG TTCATTTCTCTTATT SSU05_1017 991412 - 990612 - | amino acid ABC transporter periplasmic protein TERM 1213 990680 - 990703 + g 100 -9 -4.96646 | gap 1 CACTTGCTTTTACTT CTGCGATA-AC CTT GTCTATCGCAG TTTTTAGTTCTGTAC SSU05_1018 992339 - 991584 - | putative amino acid transporter, amino acid-binding protein SSU05_1019 992455 - 992336 - | hypothetical protein SSU05_1020 993062 - 992595 - | NTP pyrophosphohydrolase including oxidative damage repair enzymes SSU05_1021 993324 - 993055 - | histone acetyltransferase HPA2-like acetyltransferase SSU05_1022 999421 - 993641 - | hypothetical protein TERM 1214 997255 - 997275 + g 76 -7.6 -4.23045 | opp_overlap 997255 AAACTAGTTTGAAGA CTGCCTTG CCATT CAAGGTAG TTTCTTCAATACTTG TERM 1215 997811 - 997829 + g 70 -6 -4.25104 | AGGTTGTTTGGTAAT TTCTTCTG TTA CAGTAGAA TTTTCCTGACGAACA TERM 1216 998132 - 998143 + g 71 -3 -5.06414 | AGAACCAACCTTACC TTCA GTAA TGAA TTTTTCTTCCCCAAC TERM 1217 999365 - 999335 - G 82 -4.6 -5.40625 | overlap 999337 AGAGGACACAAAAAA TAGACTTGTCACTG CCG CTGAGACAAGTCCC ACTGACATTTTTCTA TERM 1218 999363 - 999337 - G 88 -9.4 -4.32846 | overlap 999335 AGGACACAAAAAATA GACTTGTCACTG CCG CTGAGACAAGTC CCACTGACATTTTTC TERM 1219 999554 - 999578 + r 71 -4.9 -4.57581 | opp_overlap 999555, overlap 999555 CAATGTTCATAAAAA ACGACAGGATG CAG TACCCTGTCGC TTTATTCTTTCGAAT TERM 1220 999555 - 999577 + r 70 -8.4 -3.33464 | opp_overlap 999555, overlap 999554 AATGTTCATAAAAAA CGACAGGATG CAG TACCCTGTCG CTTTATTCTTTCGAA TERM 1221 999577 - 999555 - R 100 -9.9 -5.25803 | opp_overlap 999554 999555 AATGTTCATAAAAAA CGACAGGAT GCAGT ACCCTGTCG CTTTATTCTTTCGAA SSU05_1023 1001570 - 999735 - | hypothetical protein SSU05_1024 1002784 - 1001573 - | helicase subunit of the DNA excision repair complex TERM 1222 1001959 - 1001972 + gr 72 -8.1 -3.53722 | GCCCCCGTTCATTAC GGAGG AAGC CCTCC TTGTCTGCGTCTAAG SSU05_1025 1003556 - 1002741 - | helicase subunit of the DNA excision repair complex TERM 1223 1003657 - 1003673 + H 76 -9.5 -3.29511 | opp_overlap 1003650 TTTAATGACTTTGTA TGTCAGA AAT TCTGACA TTATAAAAACCTCAA SSU05_1026 1003748 - 1004239 + | amino acid ABC transporter periplasmic protein SSU05_1027 1004250 - 1005563 + | amino acid ABC transporter periplasmic protein SSU05_1028 1005412 - 1005951 + | amino acid ABC transporter periplasmic protein TERM 1224 1006216 - 1006196 - g 73 -9.1 -3.53012 | opp_overlap 1006188 CGCCTTCCGTTCAAA TGTCGGAAT GGT ATTCCAACA CTTCAACCTCTTCCC SSU05_1029 1005951 - 1006691 + | ABC-type polar amino acid transport system, ATPase component TERM 1225 1006728 - 1006767 + T 100 -13.2 -5.7827 | gap 1, opp_overlap 1006741 TGCATCAAGGTTTCA GATTGAAGAAAA-AGTCCA TTT TGGACGATTTTCTTCAATC TTTTTTCTTTATGTT TERM 1226 1006753 - 1006741 - T 93 -7.7 -5.12068 | opp_overlap 1006728 CAGATTGAAGAAAAA GTCCA TTT TGGAC GATTTTCTTCAATCT TERM 1227 1006830 - 1006795 - T 100 -10.6 -5.79595 | opp_overlap 1006795 GTTGAAAATAAAAAA CTCTTAGAAACGCCGA AATA TCAATGTTTCTAAGAG TTTAATGACTTGCTA TERM 1228 1006795 - 1006830 + T 74 -8.4 -3.80114 | opp_overlap 1006795 GTTGAAAATAAAAAA CTCTTAGAAACGCCGA AATA TCAATGTTTCTAAGAG TTTAATGACTTGCTA TERM 1229 1006904 - 1006919 + T 90 -4 -5.92337 | overlap 1006905 TCTACGTTCTGAAGC TTTGAC TTTC GTCAAG TTTTTTTTGGTATCT SSU05_1030 1007436 - 1006945 - | histone acetyltransferase HPA2-like acetyltransferase TERM 1230 1007689 - 1007711 + rH 100 -8.5 -5.55769 | TTGAGCAGATTTCGA CACACTACT AAATA GGTAGTGTG TTTTTTCTTGTAAAG TERM 1231 1007789 - 1007777 - gR 74 -4.9 -4.77036 | opp_overlap 1007777 CTCGACCATCAAAAA GATTT GCG AAATC TAGTTCAGGACCTAA SSU05_1032 1007978 - 1007877 - | hypothetical protein SSU05_1031 1007735 - 1009267 + | ABC transporter ATPase TERM 1232 1009298 - 1009272 - TR 76 -2.3 -5.4492 | gap 1, opp_overlap 1009278, overlap 1009278 GACAGATATAAAAAA GGAAA-ATGGCA CACA CGCCAAATTTCC TTTTATTATTTATTC TERM 1233 1009291 - 1009278 - TR 74 -4.5 -4.90477 | opp_overlap 1009278, overlap 1009272 TATAAAAAAGGAAAA TGGCA CACA CGCCA AATTTCCTTTTATTA SSU05_1033 1010628 - 1009348 - | O-acetylhomoserine sulfhydrylase TERM 1234 1011084 - 1011106 + r 74 -4.9 -4.87133 | overlap 1011076 CAACATTGCGGTTAC CGATTTTCT AGAAA GGAGAATCG TTTTATTTCCAACAT TERM 1235 1011298 - 1011321 + r 95 -12.6 -4.28188 | opp_overlap 1011291 ATAGACTAGTCATCA GTAGGTCAAA CTAA TTTGACCTAC TTTATCTTATAGATG SSU05_1034 1012047 - 1011496 - | hypothetical protein TERM 1236 1011650 - 1011662 + g 71 -4.9 -4.59954 | opp_overlap 1011650 TTGTCGCGAAGCAAT TTGAT TTC ATCAA TATTTTTTTGTTCTT TERM 1237 1012341 - 1012302 - R 100 -15.3 -2.7623 | gap 1, opp_overlap 1012309, overlap 1012309 TAATATTAAATTAAG CAATAAACCCCACTGACT TATTC AGCCAGTGGGGTTT-TTG AGTGTTTTCCGTAGA TERM 1238 1012335 - 1012309 - R 100 -14.5 -4.37247 | opp_overlap 1012309, overlap 1012302 AAATTAAGCAATAAA CCCCACTGACT TATTC AGCCAGTGGGG TTTTTGAGTGTTTTC TERM 1239 1012309 - 1012335 + r 100 -12.3 -4.80396 | opp_overlap 1012302 1012309 AAATTAAGCAATAAA CCCCACTGACT TATTC AGCCAGTGGGG TTTTTGAGTGTTTTC SSU05_1035 1013276 - 1012383 - | galactose mutarotase-like protein TERM 1240 1013332 - 1013302 - R 86 -9.9 -4.34402 | gap 1, opp_overlap 1013302 1013300 1013296 1013305 TCCCTTATATGAAAA CAAGGATGC-TAAC TTGA GCTAGGCATCCTTG TATTAGTTTTATTCA SSU05_1036 1014768 - 1013341 - | 6-phospho-beta-galactosidase TERM 1241 1014812 - 1014780 - R 85 -7 -4.94811 | opp_overlap 1014780 TCAAAAATAAATAAA GGGGTAGGAGTT GGAGATGAT AACTCCCTCCCC TTTTGATTAAGAACC TERM 1242 1014780 - 1014812 + r 70 -5.5 -4.4078 | opp_overlap 1014780 TCAAAAATAAATAAA GGGGTAGGAGTTG GAGATGA TAACTCCCTCCCC TTTTGATTAAGAACC TERM 1243 1015029 - 1015013 - R 71 -7.3 -3.85698 | CTGTTGTTTGACAAA GTCAAGA GCA CCTTGAC CATCTCGTGTGAGTT SSU05_1037 1016671 - 1014992 - | phosphotransferase system cellobiose-specific component IIC TERM 1244 1015726 - 1015716 - G 70 -5.4 -4.53602 | TTTACACCAAAGAAA GTTG GAA CAAC TGAAGCACGTCCAAT SSU05_1038 1016988 - 1016671 - | phosphotransferase system cellobiose-specific component IIA SSU05_1039 1017853 - 1017020 - | transcriptional antiterminator TERM 1245 1017931 - 1017884 - R 93 -6.6 -5.63103 | gap 1, opp_overlap 1017915 TTTTAAGCAAAAAAA GACTACAAACAAACC-GAGAATA TCC TACTCTCAAATCCATTTGTAGTC TTGCCTAATCGAATT SSU05_1040 1018944 - 1018042 - | tagatose 1,6-diphosphate aldolase TERM 1246 1018727 - 1018687 - G 70 -9.2 -2.87344 | gap 1, opp_overlap 1018687 1018724, overlap 1018690 TAGTCGTTTTACAGA CCA-CTCTACTAGGCAATC TGGT AATCGACTAGTAGAGCTGG TATCATAGCCAGTTT TERM 1247 1018723 - 1018690 - G 71 -9.7 -2.69151 | opp_overlap 1018687, overlap 1018687 TCGTTTTACAGACCA CTCTACTAGGCAATC TGGT AATCGACTAGTAGAG CTGGTATCATAGCCA TERM 1248 1018724 - 1018739 + g 73 -2.6 -5.15634 | gap 1, opp_overlap 1018687, overlap 1018687 AATCGACTAGTAGAG CTGG-TA TCA TAGCCAG TTTTTTCATAAGCTA SSU05_1041 1019819 - 1019022 - | fructose-1-phosphate kinase-like protein SSU05_1042 1020480 - 1019965 - | galactose-6-phosphate isomerase subunit LacB SSU05_1043 1020929 - 1020507 - | ribose 5-phosphate isomerase RpiB SSU05_1044 1021159 - 1020926 - | hypothetical protein TERM 1249 1021038 - 1021080 + gr 95 -5.9 -5.58454 | opp_overlap 1021038 TTTAAATTATACAAC CAAACAAACATAAAGTCAA CATAT TTTATTTTATTTTTGTTTG TTTTTTTCGTATACA TERM 1250 1021105 - 1021122 + gr 70 -5.6 -4.33767 | opp_overlap 1021105 TATACAAACAAAAAA CCAACA TTTCTC TGTTGG TTTTGATAACTTTAT TERM 1251 1021122 - 1021105 - GR 100 -5.6 -5.76237 | opp_overlap 1021105 TATACAAACAAAAAA CCAACA TTTCTC TGTTGG TTTTGATAACTTTAT SSU05_1045 1021901 - 1021134 - | sugar metabolism transcriptional regulator TERM 1252 1022063 - 1022041 - H 73 -7.1 -4.09685 | gap 1, opp_overlap 1022020, overlap 1022043 GCGCAGTTCGCAAAA CA-TCGGTTC GTTA GAACCGACTG CAAGGAAAAAAGAAA TERM 1253 1022060 - 1022043 - H 84 -9.9 -3.64716 | overlap 1022041 GCAGTTCGCAAAACA TCGGTTC GTTA GAACCGA CTGCAAGGAAAAAAG TERM 1254 1022500 - 1022514 + G 76 -9.2 -3.48703 | opp_overlap 1022473 CGATGCTCTGCAACG CGGCCG TGA TGGCCG TTGGTATTTAAATTT TERM 1255 1022654 - 1022644 - g 78 -4 -5.19212 | ACGAGCAGGAAAAAA GAAA GTC TTTC ATGTTCCCAAAGATT SSU05_1046 1022180 - 1022935 + | hypothetical protein TERM 1256 1023084 - 1023066 - f 74 -8.2 -3.76232 | overlap 1023069 CTGTTAAATAGACAA CAAGTAGC GGA ACTACTTG GAATAGATCCTAAAT TERM 1257 1023221 - 1023278 + F 84 -9.7 -3.73995 | gap 1, opp_overlap 1023221 1023223, overlap 1023221 CGATTGACGGATAAT GATTGATAAAATTAGATTTTTCATATAT CCT ATATGTGACTAGTCTA-TTTTATCAATC ATTTTTTATAGAAAG TERM 1258 1023221 - 1023279 + F 74 -3.7 -5.24129 | opp_overlap 1023221 1023223, overlap 1023221 CGATTGACGGATAAT -GATTGATAAAATTAGATTTTTCATATAT CCT ATATGTGACTAGTCTA-TTTTATCAATCA TTTTTTATAGAAAGG TERM 1259 1023841 - 1023822 - g 80 -5 -5.20154 | overlap 1023810 ACAGAATTTAAAAAA CTCAGACA ATAC TGCCTAAG TCATACTGAGGATGA SSU05_1047 1023303 - 1024094 + | integrase TERM 1260 1024319 - 1024297 - g 89 -6.2 -5.26316 | overlap 1024301 1024302 TGATGCCAGAAAAAA GACACCAGCA AGA TGCTGAGGCC TTAAATTTATTGAAT SSU05_1048 1024140 - 1024349 + | integrase SSU05_1049 1025124 - 1024576 - | hypothetical protein SSU05_1050 1025486 - 1025391 - | hypothetical protein SSU05_1051 1025750 - 1026550 + | transcriptional regulator TERM 1261 1026699 - 1026659 - T 79 -6.9 -4.46617 | opp_overlap 1026670, overlap 1026670 AAAACAAATTGAAAA GCACAGTAAAAGGAGGCTA TGA CAGCCTCCTTTTTATATGT CAAATTGGAAAAGTC TERM 1262 1026670 - 1026688 + T 100 -10.3 -5.03994 | opp_overlap 1026670 1026659 AAAAGCACAGTAAAA GGAGGCT ATGAC AGCCTCC TTTTTATATGTCAAA TERM 1263 1026688 - 1026670 - T 95 -11 -4.41797 | opp_overlap 1026670, overlap 1026659 AAAAGCACAGTAAAA GGAGGCTA TGA CAGCCTCC TTTTTATATGTCAAA SSU05_1052 1028446 - 1027214 - | A/G-specific DNA glycosylase TERM 1264 1028421 - 1028398 - G 100 -8.8 -4.70921 | opp_overlap 1028398 TATAACACAAAGAAA GGGAGCCAGC TTTT GCCAACTCCC TTATATCGTTTATAA TERM 1265 1028482 - 1028448 - R 86 -10.1 -4.27965 | opp_overlap 1028459, overlap 1028451 ATAATCAAAATCAAA CTAGCTCCAAAGGTT TGGGG AACCTTTGGAGGTTG GAAATAGAGCGAACG TERM 1266 1028479 - 1028451 - R 79 -10.4 -3.11579 | opp_overlap 1028459, overlap 1028448 ATCAAAATCAAACTA GCTCCAAAGGTT TGGGG AACCTTTGGAGG TTGGAAATAGAGCGA SSU05_1053 1028944 - 1028552 - | hypothetical protein TERM 1267 1028599 - 1028586 - G 71 -6.7 -4.2243 | ACAAACATGGTAAAA CTTGC TGAA GCAAG TAGCTGTTTATCTTG SSU05_1054 1030484 - 1028928 - | ABC-type multidrug transport system, ATPase and permease component SSU05_1055 1030671 - 1030462 - | ABC-type multidrug transport system, ATPase and permease component SSU05_1056 1032397 - 1030658 - | ABC-type multidrug transport system, ATPase and permease component TERM 1268 1031161 - 1031130 - G 71 -8.8 -3.32456 | gap 1, opp_overlap 1031130, overlap 1031121 1031119 1031128 AAATTAGAACGAATA GTTCCAGCAAAAAGC TGG GCCTGTTGC-GGAAC GATGGCAATTCGCTG TERM 1269 1032263 - 1032232 - G 90 -5.8 -5.58074 | opp_overlap 1032235, overlap 1032233 1032235 1032237 CAACCAGTAAAAAAA GCATAGCAACCAGG TTTC CCTGGCTGCCATTT GGAATAATTGTATCA TERM 1270 1032262 - 1032233 - G 83 -9.3 -3.93218 | opp_overlap 1032235, overlap 1032232 1032235 1032237 AACCAGTAAAAAAAG CATAGCAACCAGG TTTC CCTGGCTGCCATT TGGAATAATTGTATC TERM 1271 1032260 - 1032235 - G 91 -11.9 -3.53247 | opp_overlap 1032235, overlap 1032233 1032232 1032237 CCAGTAAAAAAAGCA TAGCAACCAGG TTTC CCTGGCTGCCA TTTGGAATAATTGTA TERM 1272 1032258 - 1032237 - G 95 -12.3 -3.3215 | opp_overlap 1032235, overlap 1032235 1032233 1032232 AGTAAAAAAAGCATA GCAACCAGG TTTC CCTGGCTGC CATTTGGAATAATTG eutD 1033379 - 1032399 - | phosphotransacetylase TERM 1273 1032745 - 1032761 + g 77 -6.5 -4.68384 | ACCTTATCAACTTTA GGACCTG AGC CAGATCC TTTTGTTGAATAGCT SSU05_1058 1034284 - 1033391 - | pseudouridylate synthase, 23S RNA-specific ppnK 1035132 - 1034284 - | inorganic polyphosphate/ATP-NAD kinase SSU05_1060 1035757 - 1035086 - | hypothetical protein SSU05_1061 1035844 - 1036146 + | hypothetical protein SSU05_1062 1036100 - 1036219 + | hypothetical protein SSU05_1063 1036241 - 1036333 + | hypothetical protein SSU05_1064 1036305 - 1036412 + | hypothetical protein TERM 1274 1036416 - 1036447 + F 75 -9.7 -2.80796 | opp_overlap 1036416, overlap 1036415 1036423 1036428 1036442 CACATGAAATAACTA TAAAAAATCAGCC AACTAA GGTTGATTTTTTA GTTTCACTACTGAAA TERM 1275 1036423 - 1036440 + F 76 -3.4 -5.38497 | opp_overlap 1036416, overlap 1036416 1036415 1036428 AATAACTATAAAAAA TCAGCC AACTAA GGTTGA TTTTTTAGTTTCACT TERM 1276 1036442 - 1036463 + F 73 -2.4 -5.31158 | opp_overlap 1036416, overlap 1036416 1036415 1036449 1036458 CCAACTAAGGTTGAT TTTTTAGT TTCACT ACTGAAAA TTTTTCATTTTTTTG TERM 1277 1036458 - 1036470 + F 88 -4.9 -5.59357 | overlap 1036449 1036442 TTTTAGTTTCACTAC TGAAA ATT TTTCA TTTTTTTGATATAAT TERM 1278 1036530 - 1036507 - f 70 -3.2 -5.05782 | overlap 1036509 ATCTATCGTAAAAAA TACTTTTATG TCAT CATAAAAGCT CAGTGTGTAAAAGGA TERM 1279 1036528 - 1036509 - f 76 -8 -4.15748 | overlap 1036507 CTATCGTAAAAAATA CTTTTATG TCAT CATAAAAG CTCAGTGTGTAAAAG SSU05_1065 1036533 - 1037534 + | ribose-phosphate pyrophosphokinase SSU05_1066 1037452 - 1038660 + | cysteine sulfinate desulfinase/cysteine desulfurase SSU05_1067 1038650 - 1039006 + | hypothetical protein TERM 1280 1039077 - 1039087 + GF 79 -6.8 -4.68506 | opp_overlap 1039070, overlap 1039070 GAGAATAAGGATGCA GCCA TTC TGGC TTTTTCCGGTTGCTT SSU05_1068 1038975 - 1039211 + | hypothetical protein TERM 1281 1039206 - 1039229 + F 100 -9 -5.44119 | opp_overlap 1039206 1039208 TATTTACAAACACTA GATTAGACAG TTTC CTGTTTAATC TTTTTTTAAAATCAA SSU05_1069 1039346 - 1039984 + | redox-sensing transcriptional repressor Rex TERM 1282 1040030 - 1040054 + G 70 -5.6 -4.30719 | opp_overlap 1040031, overlap 1040031 GGAAATGAATATAAA ACAGGGGATC ATACA GAACCCCTGC TTTCTTATACCCAGA TERM 1283 1040053 - 1040031 - g 100 -9.1 -4.76274 | opp_overlap 1040031 1040030 GAAATGAATATAAAA CAGGGGATC ATACA GAACCCCTG CTTTCTTATACCCAG TERM 1284 1040433 - 1040411 - g 72 -7.8 -3.8397 | overlap 1040399 ATAGACGGACAAGAA GTCAGTCAAA CGA TTCAACTGAC TCAAAATAGTCCACT SSU05_1070 1039988 - 1040524 + | hypothetical protein SSU05_1071 1041029 - 1040676 - | DNA repair protein SSU05_1072 1041201 - 1041034 - | DNA repair protein SSU05_1073 1041355 - 1041206 - | putative DNA repair protein SSU05_1074 1042175 - 1041468 - | sortase SSU05_1075 1044667 - 1042223 - | DNA gyrase subunit A ldh 1044856 - 1045839 + | L-lactate dehydrogenase TERM 1285 1045887 - 1045850 - T 95 -10.7 -4.62002 | opp_overlap 1045851 1045860, overlap 1045860 ACTAATTATATAAAA TAGTAAAAAAGGTGAGC AATA GCTCGCCTTTTTTACCT TCTAATATCATAGCG TERM 1286 1045851 - 1045886 + T 100 -14.2 -3.484 | opp_overlap 1045850 1045860, overlap 1045860 CTAATTATATAAAAT AGTAAAAAAGGTGAGC AATA GCTCGCCTTTTTTACC TTCTAATATCATAGC TERM 1287 1045860 - 1045877 + T 100 -9.1 -5.1925 | opp_overlap 1045860 1045850, overlap 1045851 TAAAATAGTAAAAAA GGTGAGC AATA GCTCGCC TTTTTTACCTTCTAA TERM 1288 1045877 - 1045860 - T 95 -6.9 -5.36314 | opp_overlap 1045851 1045860, overlap 1045850 TAAAATAGTAAAAAA GGTGAGC AATA GCTCGCC TTTTTTACCTTCTAA SSU05_1077 1046115 - 1045882 - | dihydrofolate reductase SSU05_1078 1046514 - 1046119 - | dihydrofolate reductase TERM 1289 1046570 - 1046546 - R 100 -14.5 -2.9138 | opp_overlap 1046546 1046552, overlap 1046552 CAGCAAAGAACATGA TAAAAAGGTCC ACT GGACCTTTTTA TTTAGATTTGATATA TERM 1290 1046546 - 1046570 + r 100 -14.5 -3.8822 | opp_overlap 1046546 1046552, overlap 1046552 CAGCAAAGAACATGA TAAAAAGGTCC ACT GGACCTTTTTA TTTAGATTTGATATA TERM 1291 1046552 - 1046564 + r 100 -9.1 -5.34381 | opp_overlap 1046552 1046546, overlap 1046546 AGAACATGATAAAAA GGTCC ACT GGACC TTTTTATTTAGATTT TERM 1292 1046564 - 1046552 - R 100 -9.1 -4.9934 | opp_overlap 1046546 1046552, overlap 1046546 AGAACATGATAAAAA GGTCC ACT GGACC TTTTTATTTAGATTT SSU05_1079 1047521 - 1046568 - | ABC transporter permease SSU05_1080 1048611 - 1047523 - | ABC-type uncharacterized transport system, permease component SSU05_1081 1050112 - 1048577 - | ABC-type uncharacterized transport system, ATPase component TERM 1293 1049689 - 1049703 + gr 70 -8.6 -3.07994 | opp_overlap 1049688 1049686 1049689 CACCCACAGAAATAT CTGCAA CCT TTGCAG TTGGATCAACTTCAA TERM 1294 1049778 - 1049790 + gr 75 -9.1 -3.53012 | opp_overlap 1049776 TTAAGGTCAATCACG CCACC TTT GGTGG TTTCAGAACCAAGAA SSU05_1082 1050220 - 1050119 - | hypothetical protein TERM 1295 1050248 - 1050195 - G 100 -15.7 -2.93723 | opp_overlap 1050213, overlap 1050198 1050213 TCTTCATCAACTATA CCATTTTTGTCAGTAAAACCTACCA TAGC TGATAGGCTTTACTGACAAAAATCT CAGCCCGAAAACGGC TERM 1296 1050245 - 1050198 - G 100 -21.8 -2.70936 | opp_overlap 1050213, overlap 1050195 1050213 TCATCAACTATACCA TTTTTGTCAGTAAAACCTACCA TAGC TGATAGGCTTTACTGACAAAAA TCTCAGCCCGAAAAC TERM 1297 1050230 - 1050213 - G 72 -6.3 -4.25104 | opp_overlap 1050213, overlap 1050198 1050195 TTTTTGTCAGTAAAA CCTACCA TAGC TGATAGG CTTTACTGACAAAAA TERM 1298 1050280 - 1050260 - R 100 -13.9 -4.11394 | opp_overlap 1050252 ATCTCAGCCCGAAAA CGGCGCCCC GTC GGGTCGCCG AATCGGAATTGTCGA SSU05_1083 1051374 - 1050307 - | ABC transporter periplasmic protein SSU05_1084 1051859 - 1051455 - | cytidine deaminase TERM 1299 1051492 - 1051514 + gr 79 -7.6 -4.32857 | overlap 1051493 TATGGTAGTAATTCC CCGACTGTCG TCT CGACTGTCGA TTTATCTTTAGCGAC TERM 1300 1051493 - 1051513 + gr 80 -11.1 -3.19232 | overlap 1051492 ATGGTAGTAATTCCC CGACTGTCG TCT CGACTGTCG ATTTATCTTTAGCGA SSU05_1085 1052493 - 1051831 - | deoxyribose-phosphate aldolase TERM 1301 1052513 - 1052532 + r 73 -2.2 -5.27023 | opp_overlap 1052513 TTCTCCGTACATTAA GAAATAAT CTCG ATGATTTC TTTTGTTTTTACACT SSU05_1086 1053786 - 1052509 - | pyrimidine-nucleoside phosphorylase SSU05_1087 1054373 - 1053783 - | 16S RNA G1207 methylase RsmC TERM 1302 1054201 - 1054218 + g 70 -2.7 -5.00884 | TCCAACACTGATGCC CCTTTTT CAAA ATAAAGG TTTTTTAAAAGCACT SSU05_1088 1054482 - 1055402 + | pantothenate kinase TERM 1303 1055693 - 1055668 - g 86 -6.8 -4.97405 | opp_overlap 1055683 1055687, overlap 1055672 ATTCACAAAAACAAA GCAAGCCGCG ATAAAG CACGTCTTGC ATCAAAACTTGCTTA TERM 1304 1055716 - 1055672 - g 72 -7.9 -3.8823 | opp_overlap 1055683 1055687, overlap 1055668 1055713 ACAAAAACAAAGCAA GCCGCGATAAAGCACGTCTTG CAT CAAAACTTGCTTAATCATGAC CACCCGTCAAACGGG rpsT 1055461 - 1055709 + | 30S ribosomal protein S20 TERM 1305 1055716 - 1055734 + T 100 -14.6 -3.53224 | opp_overlap 1055713 CTTGCTTAATCATGA CCACCCGT CAA ACGGGTGG TTTGAACAAGGGCTA TERM 1306 1055756 - 1055744 - T 75 -9.1 -3.61398 | GGGTGGTTTGAACAA GGGCT ATA AGCCC ACATCACCAGCCAGC TERM 1307 1055766 - 1055787 + T 91 -11.5 -3.93262 | opp_overlap 1055763 AAGCCCACATCACCA GCCAGCGCC TAAA GACGCTGGC TTTCACTTTGTTCAA TERM 1308 1055829 - 1055843 + T 73 -10 -2.54687 | overlap 1055828 TTTGACTCGTCACTA GCCTCT TAA AGAGGC ATTCGTACTACTTGC SSU05_1090 1056351 - 1055851 - | IS200 family transposase TERM 1309 1056398 - 1056416 + r 91 -10.2 -4.55295 | overlap 1056399 TGTAACCTTCGTCGC GCACCCGC ATA GCGGGTGG TTTATTTGTCACGCA TERM 1310 1056399 - 1056415 + r 100 -13.7 -3.32695 | overlap 1056398 GTAACCTTCGTCGCG CACCCGC ATA GCGGGTG GTTTATTTGTCACGC TERM 1311 1056473 - 1056490 + r 100 -4.1 -6.71862 | opp_overlap 1056474, overlap 1056474 TCACATAATTAAAAA AGAAACC TTTG GGTTTCC TTTTTTTTTTATTTT TERM 1312 1056474 - 1056489 + r 84 -7.6 -4.54881 | opp_overlap 1056474, overlap 1056473 CACATAATTAAAAAA GAAACC TTTG GGTTTC CTTTTTTTTTTATTT TERM 1313 1056489 - 1056474 - R 95 -7.6 -5.35354 | opp_overlap 1056473 1056474 CACATAATTAAAAAA GAAACC TTTG GGTTTC CTTTTTTTTTTATTT TERM 1314 1056572 - 1056623 + r 95 -11 -4.60317 | opp_overlap 1056582, overlap 1056576 ACATCATTAACTCGT CAACCGTAAAGCCCTCACTAAG ATTATACA CCTAGTGAGGGCTTTATGTTCG TTTTCATTATTCTGT TERM 1315 1056576 - 1056619 + r 100 -14.8 -3.78229 | opp_overlap 1056582, overlap 1056572 CATTAACTCGTCAAC CGTAAAGCCCTCACTAAG ATTATACA CCTAGTGAGGGCTTTATG TTCGTTTTCATTATT TERM 1316 1056613 - 1056582 - R 93 -12.4 -3.66178 | opp_overlap 1056576 1056572 CTCGTCAACCGTAAA GCCCTCACTAAG ATTATACA CCTAGTGAGGGC TTTATGTTCGTTTTC TERM 1317 1056639 - 1056677 + r 73 -5.8 -4.45127 | TTTTCATTATTCTGT GGGTGAGGCGGAGCCATC ATG GATGTCTTTCCCACTCCC TATTTTTTATTATTA SSU05_1091 1057958 - 1056729 - | transglutaminase/protease-like domain-containing protein TERM 1318 1058180 - 1058166 - gH 76 -10 -2.9914 | GAGGCTGGAGATAGA GCGAAC AGA GTTCGC TACAAAACTACCTGG SSU05_1092 1058097 - 1058288 + | hypothetical protein SSU05_1093 1058210 - 1058317 + | hypothetical protein SSU05_1094 1059668 - 1058289 - | Signal transduction histidine kinase SSU05_1095 1060335 - 1059661 - | response regulator SSU05_1096 1060432 - 1060325 - | hypothetical protein TERM 1319 1060387 - 1060373 - G 93 -10 -4.30977 | opp_overlap 1060380, overlap 1060368 AATAAACAAACCAAA GACCTG GGA CAGGTC ACGGTCTTTAAGAGA SSU05_1097 1060906 - 1060526 - | hypothetical protein TERM 1320 1061063 - 1061101 + H 78 -3.9 -5.40464 | gap 1, opp_overlap 1061052 1061075, overlap 1061085 1061095 1061096 1061099 AACATACTAAGATTA GTAGTGAGGA-AATCTCC GACG GGAGAAAGTACTCACTAC TTTTTCTTTATGATA SSU05_1098 1061144 - 1061809 + | transposase TERM 1321 1061995 - 1061975 - g 77 -6.2 -4.63218 | gap 1, opp_overlap 1061975 GTGCCGTCAAGAAAA CCTC-TCCA ATAC TGGAAGAGG TCCGTTACTATACAA TERM 1322 1062411 - 1062371 - g 87 -6.1 -5.10877 | ATAAGAAACGAAAAA GACAATCGCAAACGACTTC AAC GAAGCTGCACACGATTGCC TCCATACATCGTCTC SSU05_1099 1061836 - 1062495 + | transposase TERM 1323 1062692 - 1062675 - T 82 -7.7 -4.45577 | opp_overlap 1062675 ACAAATGGTAGAAAA GAAGCCC TCTC GGACTTC TGAATTACAACTCTG SSU05_1100 1063089 - 1062697 - | phosphate uptake regulator SSU05_1101 1064141 - 1063383 - | ABC-type phosphate transport system, ATPase component SSU05_1102 1064938 - 1064153 - | ABC-type phosphate transport system, ATPase component TERM 1324 1064501 - 1064468 - G 76 -9.7 -3.32844 | opp_overlap 1064475 1064477 CTGTCCACCTGATAA GGTAAAGGCTGACTT GTGC AAGTCATCTTTTACC TGATCCCAAAGGGCT SSU05_1103 1065869 - 1064982 - | putative phosphate ABC transporter (permease protein) SSU05_1104 1066776 - 1065859 - | ABC-type phosphate transport system, permease component SSU05_1105 1067321 - 1066779 - | ABC-type phosphate transport system, periplasmic component SSU05_1106 1067649 - 1067398 - | ABC-type phosphate transport system, periplasmic component SSU05_1107 1068812 - 1067787 - | rRNA methyltransferase, putative SSU05_1108 1069051 - 1068950 - | hypothetical protein TERM 1325 1069050 - 1069028 - G 77 -4.9 -5.08011 | AAAACTCTCAAAAAA TGCTTGG GCTTCACTA CCAAGCA AATGATTATATTTAT SSU05_1109 1069849 - 1069202 - | hypothetical protein SSU05_1110 1070117 - 1069839 - | hypothetical protein TERM 1326 1070080 - 1070050 - G 88 -6.9 -5.09225 | gap 1, opp_overlap 1070058 1070059, overlap 1070054 ACCTGATTCAAAAAA GAAAGCACGGAGGA AATC TCCTCTGTGC-TCC ACGAAAAATCAAGTG TERM 1327 1070077 - 1070054 - G 100 -11 -5.0666 | opp_overlap 1070058 1070059, overlap 1070050 GATTCAAAAAAGAAA GCACGGAGGA AATC TCCTCTGTGC TCCACGAAAAATCAA TERM 1328 1070096 - 1070120 + g 100 -9.5 -4.91194 | ACGAAAAATCAAGTG GATATGAATAA TTT TTGTTCATATC TTTTATCTTTCTTAT spxA 1070557 - 1070132 - | transcriptional regulator Spx SSU05_1112 1071384 - 1070608 - | Kef-type K+ transporter NAD-binding component SSU05_1113 1072360 - 1071347 - | bifunctional riboflavin kinase/FMN adenylyltransferase SSU05_1114 1073072 - 1072305 - | pseudouridine synthase SSU05_1115 1073201 - 1073076 - | pseudouridine synthase TERM 1329 1073137 - 1073153 + g 82 -3 -5.54192 | gap 1, overlap 1073135 AATACAACATCATGC GAGGTCA TACC TG-CCTC TTTTTTTACATTAAT TERM 1330 1073224 - 1073203 - R 91 -11.5 -4.29304 | overlap 1073197 TCATTATAACACAAA GGACCGCTC TTGT GGGCGGTCC GGTATCAATCAGTCA SSU05_1116 1073442 - 1073233 - | hypothetical protein SSU05_1117 1073851 - 1073690 - | hypothetical protein SSU05_1118 1074926 - 1073793 - | hypothetical protein TERM 1331 1074544 - 1074570 + gr 72 -9.5 -2.73771 | gap 1 TGGCGTGTCAAACCT TGCAGGAGCTGG TCTT TCAGCTCC-GCA TCCTCTGTCTGCTCA SSU05_1119 1075156 - 1074923 - | hypothetical protein SSU05_1120 1075402 - 1075169 - | histone acetyltransferase HPA2-like acetyltransferase TERM 1332 1075484 - 1075462 - g 70 -2.7 -5.0133 | overlap 1075463 GATTTTCGTAAAAAA GTTCTCGCA TACTG TGAGAAAAC CGGCAGTATTACTGA SSU05_1121 1075432 - 1075782 + | transposase TERM 1333 1076252 - 1076208 - g 77 -3.7 -5.21709 | gap 1, opp_overlap 1076220, overlap 1076210 GCTCACATCAAAAAA CACCTC-AGAAGAGTATTGC CAAATT GCGATACTTTTCTTGAGGCA CTTTCGTCCTGCTCT SSU05_1122 1075800 - 1076279 + | IS630-Spn1, transposase Orf2 SSU05_1123 1076561 - 1076280 - | histone acetyltransferase HPA2-like acetyltransferase SSU05_1124 1077816 - 1076563 - | hypothetical protein SSU05_1125 1078080 - 1077823 - | hypothetical protein TERM 1334 1077914 - 1077898 - G 82 -3 -5.55001 | CAATAAAAAATAAAA GAAACG AACCG CATTTC TAGCATCTGGAAGTG SSU05_1126 1078568 - 1078098 - | hypothetical protein TERM 1335 1078629 - 1078611 - H 74 -3.8 -5.2422 | opp_overlap 1078614, overlap 1078613 1078614 AATTATACCAAAAAA CACCGGTC TAT AACCGATA TTTCCATTGTCTCTA TERM 1336 1079017 - 1079004 - g 82 -3.1 -5.42265 | gap 1, overlap 1079006 TTAAACGAGAAAAAA GAGCTG ATG CAGC-C ACAGATTGATGCCAT TERM 1337 1079016 - 1079006 - g 74 -6.8 -4.32919 | overlap 1079004 AAACGAGAAAAAAGA GCTG ATG CAGC CACAGATTGATGCCA TERM 1338 1079742 - 1079720 - g 76 -7 -4.48333 | AGACACCAATGAAAA CAACGGCGTT GCC AAGGCCATTG AAAAACACATTTTGA SSU05_1127 1078950 - 1079765 + | HAD superfamily hydrolase SSU05_1128 1079775 - 1080995 + | peptidase T TERM 1339 1081005 - 1081024 + F 100 -8.6 -5.60993 | opp_overlap 1081005 AAATAAAATTTCAAA CGGCTTTC AATA GAAAGTCG TTTTTTTCTGAAAAA SSU05_1129 1081123 - 1081521 + | hypothetical protein TERM 1340 1081556 - 1081529 - T 72 -7.6 -3.70722 | opp_overlap 1081533, overlap 1081533 TTGATTAATATACAA TCAAGCCCCCGC ACAC GCGGAGGCTTTT TTAAACGAATAGAAA TERM 1341 1081552 - 1081533 - T 95 -12.8 -3.54503 | opp_overlap 1081533, overlap 1081529 TTAATATACAATCAA GCCCCCGC ACAC GCGGAGGC TTTTTTAAACGAATA TERM 1342 1081533 - 1081552 + T 100 -10.6 -5.0133 | opp_overlap 1081533 1081529 TTAATATACAATCAA GCCCCCGC ACAC GCGGAGGC TTTTTTAAACGAATA SSU05_1130 1082471 - 1081557 - | permease TERM 1343 1082194 - 1082214 + g 86 -9.8 -3.91352 | opp_overlap 1082188 1082197, overlap 1082197 TGCATAAGACCGACG GAAGTCTG TTGAC CAGACTTC TTTGCTTCCCAGTAT SSU05_1131 1082602 - 1082919 + | transcriptional regulator SSU05_1132 1082916 - 1084028 + | hypothetical protein TERM 1344 1084112 - 1084076 - gf 75 -5.3 -4.72486 | opp_overlap 1084104 CAGAAACTCGAAAAA TATCTCAAAAACCTACC AAA AGAAGATTTTCAAGATA CCTTGGACTATTTCA SSU05_1133 1084040 - 1084618 + | hypothetical protein TERM 1345 1085359 - 1085338 - gT 100 -7.3 -5.46706 | ATTCCAAAACAAAAA CTGACATCC ATAT AGATGCCAG TCAAAATAATCTGGG SSU05_1134 1084560 - 1085459 + | hypothetical protein TERM 1346 1085487 - 1085470 - T 90 -9.1 -4.62471 | opp_overlap 1085465 1085470 GGTAATCGCTAAAAA GCCCTCC TCAC GGAAGGC TTTTCTATTTATTTA TERM 1347 1085470 - 1085487 + T 85 -6.9 -4.93454 | opp_overlap 1085470, overlap 1085465 GGTAATCGCTAAAAA GCCCTCC TCAC GGAAGGC TTTTCTATTTATTTA SSU05_1135 1085900 - 1085496 - | hypothetical protein SSU05_1136 1086300 - 1085875 - | transcriptional regulator TERM 1348 1086162 - 1086177 + g 79 -7.6 -4.37067 | opp_overlap 1086156 1086164 CCTGCAAAGCCAACT GATGCA GGGG TGCATC TTTTAGTAATGTTTG TERM 1349 1087061 - 1087072 + G 70 -5.8 -4.37092 | CCTGATTAATGCAGG GGCA GTCA TGCC TTTTGTACCAGGGAT SSU05_1137 1086462 - 1087220 + | hypothetical protein SSU05_1138 1087762 - 1088973 + | putative cation efflux transporter TERM 1350 1089015 - 1088981 - Tf 100 -10.2 -5.56673 | opp_overlap 1088981 ATCCATAATAAAAAA TAGGAATTTTCCCT GAATTAT AGGGAGAATTCCTA TTTTTTAACCTTCCT TERM 1351 1088981 - 1089015 + TF 100 -13.1 -5.10029 | opp_overlap 1088981 ATCCATAATAAAAAA TAGGAATTTTCCCTG AATTA TAGGGAGAATTCCTA TTTTTTAACCTTCCT TERM 1352 1089200 - 1089169 - Tf 91 -6.6 -5.40464 | opp_overlap 1089170, overlap 1089170 TATTATAAAGAAAAA GCCTCTACCCGAAT AAAT ATTTGAGTAGAGGT TTTAACTGAATGATA TERM 1353 1089199 - 1089170 - Tf 85 -10.1 -3.82652 | opp_overlap 1089170, overlap 1089169 ATTATAAAGAAAAAG CCTCTACCCGAAT AAAT ATTTGAGTAGAGG TTTTAACTGAATGAT TERM 1354 1089170 - 1089199 + TF 86 -10.1 -4.20084 | opp_overlap 1089169 1089170 ATTATAAAGAAAAAG CCTCTACCCGAAT AAAT ATTTGAGTAGAGG TTTTAACTGAATGAT TERM 1355 1089218 - 1089232 + TF 76 -4.2 -5.24515 | opp_overlap 1089216 TAACTGAATGATATT GCCC ATTGGCA GGGC TTTTATTTGTTTGTT SSU05_1140 1090536 - 1089256 - | D-beta-hydroxybutyrate permease TERM 1356 1090535 - 1090521 - Gg 79 -8.6 -4.20768 | ATGTCCAATAAATAA TGGCTA CAA TAGCCA ATAAAACTCCTAAAG SSU05_1139 1090520 - 1090624 + | hypothetical protein SSU05_1141 1091105 - 1090617 - | putative 2-amino-4-hydroxy-6-hydroxymethylpteridine pyrophosphokinase SSU05_1142 1091464 - 1091102 - | dihydroneopterin aldolase TERM 1357 1091382 - 1091367 - G 86 -7.6 -4.68209 | AGGTCAACAAACAAA TCACAG TCAA CTGTGA AAATTTGACCAAGAA SSU05_1143 1092269 - 1091457 - | dihydropteroate synthase SSU05_1144 1092841 - 1092278 - | GTP cyclohydrolase I SSU05_1145 1093009 - 1093491 + | NTP pyrophosphohydrolase including oxidative damage repair enzymes TERM 1358 1093535 - 1093504 - T 100 -8 -5.5074 | opp_overlap 1093511 TAAGCTAATAAAAAA CGAAAAAGCCTTGG AAAT CCAGGGCTTCTTTG ATATTACAAATACTT TERM 1359 1093511 - 1093528 + T 81 -9.1 -4.08853 | opp_overlap 1093504 ATAAAAAACGAAAAA GCCTTGG AAAT CCAGGGC TTCTTTGATATTACA SSU05_1146 1094216 - 1093539 - | hypothetical protein SSU05_1147 1094946 - 1094203 - | SPX domain-containing protein SSU05_1148 1095139 - 1095441 + | hypothetical protein TERM 1360 1095468 - 1095449 - T 81 -7.2 -4.66537 | opp_overlap 1095449 1095444, overlap 1095444 TTTTGTAAGACAAAA GAGATGAC CGCA ATCATCTC TTTTCTTCTATTCTG TERM 1361 1095449 - 1095468 + T 82 -6.5 -4.92791 | opp_overlap 1095444 1095449, overlap 1095444 TTTTGTAAGACAAAA GAGATGA CCGCAA TCATCTC TTTTCTTCTATTCTG SSU05_1149 1095740 - 1095462 - | hypothetical protein TERM 1362 1095764 - 1095745 - R 82 -6.4 -5.00616 | CTTCCCTCCAAAAAA TCCCAGCC CGCT GACTAGGA TTTCACAAGATTTAC pheT 1098182 - 1095783 - | phenylalanyl-tRNA synthetase subunit beta SSU05_1151 1098720 - 1098184 - | histone acetyltransferase HPA2-like acetyltransferase TERM 1363 1098829 - 1098783 - R 76 -10.5 -2.63479 | gap 1, opp_overlap 1098795 AATAGTGCGAGATTA CGACGGTTCAAGGTTGAAAA CGACATAT TTTTCAACCTTGAACC-TAG TGAGGGGAGTAGGTA pheS 1099950 - 1098907 - | phenylalanyl-tRNA synthetase subunit alpha TERM 1364 1100004 - 1099969 - R 100 -11.9 -5.4505 | TCCTCCAATAAAAAA CGCATGACACCACTC GTATCG GAGCGTTGTCACGCG GTACCATCCGTTTTC TERM 1365 1100398 - 1100373 - R 82 -7.7 -4.37658 | gap 1, opp_overlap 1100373 AATCTTCCTAGAAAA CTCCC-TCTATC TAG GATAGAAAGGAG TTTAGTTTTATAGTT SSU05_1153 1102130 - 1100406 - | Beta-glucosidase-related glycosidase SSU05_1154 1103943 - 1102141 - | hypothetical protein TERM 1366 1103971 - 1103948 - R 100 -11.8 -5.00616 | gap 1, opp_overlap 1103947 1103946 TTTGCCTCCAAAAAA GCTAGAGG-GC ATA GCGCCTCTAGC CCTTCTCTAGTCGTC SSU05_1155 1104778 - 1103978 - | phosphatase SSU05_1156 1105617 - 1104778 - | D-mannonate oxidoreductase SSU05_1157 1106720 - 1105620 - | mannonate dehydratase TERM 1367 1106640 - 1106656 + g 70 -8 -3.61075 | overlap 1106655 GACTGCCGTTACGAT TCCCTG CATAC CAGGGA TTGCTTTAATCTCTT SSU05_1158 1107301 - 1106735 - | glucuronate isomerase SSU05_1159 1108172 - 1107387 - | glucuronate isomerase SSU05_1160 1108770 - 1108138 - | 2-keto-3-deoxy-6-phosphogluconate aldolase TERM 1368 1108681 - 1108671 - GR 71 -6.8 -4.11371 | opp_overlap 1108671 GAATACCTCCCAAAA TCGC ATG GCGA GCGATCTCTTTCGCA TERM 1369 1108865 - 1108842 - R 100 -7.4 -5.59502 | opp_overlap 1108840 1108842 1108843 1108844, overlap 1108844 TAAAAAAGCAAAAAA TACCCAGAAG AATT CTTCTGGGCT GTCTATTTTTTATTT TERM 1370 1108843 - 1108864 + r 73 -8.7 -3.4376 | opp_overlap 1108842 1108844, overlap 1108842 1108840 1108844 AAAAAAGCAAAAAAT ACCCAGAAG AATT CTTCTGGGC TGTCTATTTTTTATT TERM 1371 1108844 - 1108863 + r 83 -12.2 -2.63816 | opp_overlap 1108842 1108844, overlap 1108843 1108842 1108840 AAAAAGCAAAAAATA CCCAGAAG AATT CTTCTGGG CTGTCTATTTTTTAT TERM 1372 1108863 - 1108844 - R 100 -12.2 -4.37346 | opp_overlap 1108844 1108843 1108842 1108840, overlap 1108842 AAAAAGCAAAAAATA CCCAGAAG AATT CTTCTGGG CTGTCTATTTTTTAT SSU05_1161 1109015 - 1108881 - | transcriptional regulator SSU05_1162 1109624 - 1109238 - | transcriptional regulator SSU05_1163 1111448 - 1109649 - | beta-D-glucuronidase SSU05_1164 1112531 - 1111464 - | ribokinase family sugar kinase TERM 1373 1111953 - 1111939 - G 73 -5.7 -4.51196 | opp_overlap 1111938 GCTAAACCTACAAAA GGAGA TAATT TCTCC CTCGCTTCTTCAAAA TERM 1374 1112538 - 1112511 - G 100 -12.8 -3.83026 | opp_overlap 1112511 1112510 1112513 GCCTCCTAGATGAAA GACCCAGCTGGA ATCC TCCAACTAGGTC GTTATTGTATTATTT SSU05_1165 1112733 - 1112548 - | sugar transporter, putative SSU05_1166 1113323 - 1112724 - | hypothetical protein TERM 1375 1112784 - 1112806 + gr 72 -9.3 -2.6162 | opp_overlap 1112782 1112783 1112786, overlap 1112783 1112780 1112786 1112795 TAGGACAATCAAAGC CATTCTCAA ATCTG TTGAGAATG CTGTTTCAACGGTTG SSU05_1167 1114101 - 1113262 - | hypothetical protein TERM 1376 1114031 - 1114002 - GR 79 -8.1 -4.02021 | gap 1, opp_overlap 1114001 1114004 AAGCAACCAAGTAAA TATTCGTCGATGAA TTG TTCATCG-CAAATA ATATGATTTGCCATA TERM 1377 1114173 - 1114190 + r 72 -4.1 -4.92363 | overlap 1114169 TATTCTAATATTCAT CAGATGA TTTA TCAACTG TTTTTGTAAATATTT TERM 1378 1114225 - 1114247 + r 73 -9.3 -2.83953 | opp_overlap 1114225, overlap 1114222 1114227 TTATACGCAAAAAAA GACGATTTT ACGTG AAAATCGTC TGATATATTTGATTT TERM 1379 1114247 - 1114225 - R 100 -9.3 -5.50499 | opp_overlap 1114222 1114225 1114227 TTATACGCAAAAAAA GACGATTTT ACGTG AAAATCGTC TGATATATTTGATTT SSU05_1168 1115127 - 1114288 - | hypothetical protein TERM 1380 1114534 - 1114554 + g 82 -10.5 -3.60805 | opp_overlap 1114551, overlap 1114536 TTGAAGTTTGGTCGT TAGCTTGGT TGG ACCAAGCTG TTTGAACTGCAATAT TERM 1381 1114536 - 1114552 + g 81 -10.9 -3.38224 | opp_overlap 1114551, overlap 1114534 GAAGTTTGGTCGTTA GCTTGGT TGG ACCAAGC TGTTTGAACTGCAAT TERM 1382 1115160 - 1115146 - R 73 -3.5 -5.14563 | CTCTCCATCAAAAAA GCAGG TCCAG CCTAC TTTCCTGTAAATTTA SSU05_1169 1115363 - 1115157 - | hypothetical protein SSU05_1170 1116624 - 1115341 - | UDP-N-acetylglucosamine 1-carboxyvinyltransferase TERM 1383 1116925 - 1116901 - R 100 -10.1 -5.40004 | opp_overlap 1116899 CATGAAATTAAAAAA TGGAACTGAAC CAA GTTCAATCCCA TATAGATTAATGTTT SSU05_1171 1117348 - 1116932 - | F0F1-type ATP synthase, epsilon subunit SSU05_1172 1118803 - 1117358 - | F0F1 ATP synthase subunit beta SSU05_1173 1119662 - 1118784 - | F0F1 ATP synthase subunit gamma TERM 1384 1118924 - 1118941 + g 71 -7 -4.13767 | GCATGGCTGTCATAC CTGCTG CATTTT CAGCAG TTTTGGCATCCAAAA SSU05_1174 1121176 - 1119674 - | F0F1 ATP synthase subunit alpha TERM 1385 1120965 - 1120977 + g 76 -7.7 -4.07786 | opp_overlap 1120965 1120963 CCGAGAATGATAATA CCAAC ATC GTTGG TTTCTAAGTTTTGTG SSU05_1175 1121731 - 1121198 - | F0F1 ATP synthase subunit delta SSU05_1176 1122238 - 1121732 - | F0F1-type ATP synthase, subunit b TERM 1386 1121880 - 1121899 + g 71 -4.4 -4.88407 | gap 1, overlap 1121882 1121883 GCTTCACGTTTTTCA GCTTCAATT TCC AATTGA-GC TTTTTGCTTCAATCC SSU05_1177 1122816 - 1122256 - | F0F1-type ATP synthase, subunit a SSU05_1178 1123209 - 1123009 - | F0F1 ATP synthase subunit C TERM 1387 1123342 - 1123321 - R 79 -3.1 -5.45802 | opp_overlap 1123321, overlap 1123315 TTTGTAAAATAAAAA GAAAAGA GTATTTCA TCTTTTC TTCCTATTTAATAGC SSU05_1179 1124389 - 1123346 - | putative lipid kinase ligA 1126358 - 1124400 - | NAD-dependent DNA ligase LigA TERM 1388 1126282 - 1126256 - G 74 -8.1 -3.99405 | opp_overlap 1126256 CTAATTCACGATAAA GCGTATCATAT TCTGC ATCTGATACGC TAGGTTGGTCCAATT SSU05_1181 1126481 - 1126627 + | hypothetical protein TERM 1389 1126803 - 1126793 - g 73 -5.4 -4.66163 | ACTCTTACCTAAAAA CAAG TTT CTTG CCATTCTATTTGGAA SSU05_1182 1126629 - 1127534 + | permease SSU05_1183 1127531 - 1128346 + | hypothetical protein TERM 1390 1129144 - 1129124 - g 74 -7.6 -4.07568 | opp_overlap 1129117 TCTGGCGCCTTAAAA GACATGGT GCAAA ACCATGCC CTTCAAGTTCTTTCC SSU05_1184 1128425 - 1129912 + | glucose-6-phosphate 1-dehydrogenase TERM 1391 1130020 - 1130001 - f 82 -12.2 -2.53263 | opp_overlap 1129997 1129996 1130004, overlap 1130004 CTTATTTCCAACCTA GAACAGCC TCTA GGCTGTTC TAGCAACCTGCACCT TERM 1392 1130017 - 1130004 - f 70 -8.1 -3.42056 | opp_overlap 1129997 1129996 1130004, overlap 1130001 ATTTCCAACCTAGAA CAGCC TCTA GGCTG TTCTAGCAACCTGCA TERM 1393 1130004 - 1130017 + F 70 -8.1 -3.29511 | opp_overlap 1130001 1130004, overlap 1129997 1129996 ATTTCCAACCTAGAA CAGCC TCTA GGCTG TTCTAGCAACCTGCA TERM 1394 1130093 - 1130080 - f 82 -6.7 -5.05601 | opp_overlap 1130080, overlap 1130074 GACTACATATAAAAA CTGGA GCAA TCCAG TTTTTTTGGGAGATA TERM 1395 1130080 - 1130093 + F 91 -6.7 -5.41143 | opp_overlap 1130074 1130080 GACTACATATAAAAA CTGGA GCAA TCCAG TTTTTTTGGGAGATA TERM 1396 1130174 - 1130142 - g 93 -12.7 -3.06302 | opp_overlap 1130141 1130140 ATCATTCTCACCCAA CTTGAAGTAGCCAGC CAT GCTGGCACCCTCAAG CGTTATGAAAAAATT SSU05_1185 1130112 - 1130786 + | hypothetical protein SSU05_1186 1130788 - 1131345 + | acetyltransferase TERM 1397 1131362 - 1131338 - T 100 -13.7 -5.08178 | opp_overlap 1131338 ATACAGATAGAAAAA GTCGCTAGTTC ATT GAACTAACGAC TTTTTTCTATACCAA TERM 1398 1131338 - 1131362 + T 100 -11.5 -5.36441 | opp_overlap 1131338 ATACAGATAGAAAAA GTCGCTAGTTC ATT GAACTAACGAC TTTTTTCTATACCAA SSU05_1187 1132655 - 1131369 - | Signal recognition particle GTPase TERM 1399 1132390 - 1132400 + g 77 -8.2 -3.9693 | GCTTCCTTCACTCGA GCCG CAG CGGC TTCTTTGGCTGCATA TERM 1400 1132586 - 1132607 + g 100 -3.8 -5.93809 | gap 1, opp_overlap 1132589, overlap 1132589 TTTCCACTTCTTCAA CAAGAGCGA CTTGC TC-CTCTTG TTTTTTTTGTCCAAA SSU05_1188 1133457 - 1132645 - | HAD superfamily hydrolase TERM 1401 1132948 - 1132958 + g 73 -5.4 -4.72486 | GAAACGCTCGTGAAG TTCC GCA GGAA TTTTTGGAATTTGTC TERM 1402 1133365 - 1133377 + g 75 -3.3 -5.14645 | overlap 1133366 TCCACGCTCACGCGC TGCCT GCA AGGCC TTTTTATTAGCTTCT SSU05_1189 1134256 - 1133447 - | HAD superfamily hydrolase TERM 1403 1133892 - 1133882 - G 70 -5.4 -4.57073 | opp_overlap 1133882 CATCGCTTCTAAAAA CTGA GGC TCAG CATTTTTTAATAAAT SSU05_1190 1137786 - 1134253 - | chromosome segregation ATPase TERM 1404 1136075 - 1136085 + g 75 -2.4 -5.27335 | opp_overlap 1136065 GGTAAGAAGGTTGCC CGTC CTT GCCG TTTTTCTTTCAAAAA TERM 1405 1136747 - 1136761 + g 70 -5.7 -4.3014 | GAACTATCTAATTGC GCAAG CGTTT CTTGC TTTTGCTCAATCTGT TERM 1406 1136815 - 1136826 + g 70 -7.2 -3.75105 | CAACAAGTTTTCCAA GCGC GCCT GCGC TTCTTGATGACTTGA SSU05_1191 1138379 - 1137789 - | dsRNA-specific ribonuclease SSU05_1192 1138476 - 1138348 - | dsRNA-specific ribonuclease TERM 1407 1139335 - 1139321 - g 82 -2.1 -5.65177 | ATACCGACAAAAAAA CAAAC TACTT GTCTG CACAGCCCTTTTAGC SSU05_1193 1138665 - 1139654 + | hypothetical protein TERM 1408 1139685 - 1139665 - T 73 -3.3 -5.13016 | opp_overlap 1139681, overlap 1139667 1139669 1139672 AATGAAAATCAAAAA CAGACTA GCTCCAA CAGTCTG GCAATAGACTGTTGG TERM 1409 1139706 - 1139669 - T 91 -11.4 -3.64947 | opp_overlap 1139681, overlap 1139665 1139667 1139672 AAAATCAAAAACAGA CTAGCTCCAACAGTCT GGCAAT AGACTGTTGGAGGTCG GAAATTAGACGAACT TERM 1410 1139703 - 1139672 - T 82 -11.7 -2.90234 | opp_overlap 1139681, overlap 1139665 1139669 1139667 ATCAAAAACAGACTA GCTCCAACAGTCT GGCAAT AGACTGTTGGAGG TCGGAAATTAGACGA TERM 1411 1139896 - 1139867 - T 76 -5.8 -4.58466 | opp_overlap 1139869 1139870, overlap 1139870 GGTATAAGCACAAAA GAACCTTGTAAG ATCTAA CTTACAAGGCTT TTTTTACAAATCAAA TERM 1412 1139869 - 1139894 + T 89 -6.2 -5.42259 | opp_overlap 1139867 1139870, overlap 1139870 TATAAGCACAAAAGA ACCTTGTAAG ATCTAA CTTACAAGGC TTTTTTTACAAATCA TERM 1413 1139870 - 1139893 + T 85 -9.7 -3.84633 | opp_overlap 1139870 1139867, overlap 1139869 ATAAGCACAAAAGAA CCTTGTAAG ATCTAA CTTACAAGG CTTTTTTTACAAATC TERM 1414 1139893 - 1139870 - T 91 -9.7 -4.39226 | opp_overlap 1139869 1139870, overlap 1139867 ATAAGCACAAAAGAA CCTTGTAAG ATCTAA CTTACAAGG CTTTTTTTACAAATC SSU05_1194 1140610 - 1139900 - | transcriptional regulator SSU05_1195 1140811 - 1140692 - | hypothetical protein SSU05_1196 1140951 - 1140724 - | transcriptional regulator SSU05_1197 1142249 - 1140957 - | lantibiotic efflux protein TERM 1415 1142301 - 1142319 + r 89 -6.2 -5.41143 | opp_overlap 1142301 1142300 CAATAAAGTCAATAT TTAATTTT ATA AAAATTAA TTTTTTTAAACGGTA TERM 1416 1142434 - 1142396 - R 73 -9 -3.43437 | opp_overlap 1142402 1142429, overlap 1142402 1142407 GAGAAAACTGCATAA CATCAACAGAATTTAGTC TCA GACTAAGTTCTGTTTTTG ACTAAAAATGTTGAT TERM 1417 1142402 - 1142428 + r 100 -13.2 -4.66163 | opp_overlap 1142396 1142402 1142407 ACTGCATAACATCAA CAGAATTTAGTC TCA GACTAAGTTCTG TTTTTGACTAAAAAT TERM 1418 1142428 - 1142402 - R 82 -11 -3.42013 | opp_overlap 1142402, overlap 1142396 1142407 ACTGCATAACATCAA CAGAATTTAGTC TCA GACTAAGTTCTG TTTTTGACTAAAAAT SSU05_1198 1143764 - 1142601 - | hypothetical protein TERM 1419 1143465 - 1143493 + g 73 -5.3 -4.68593 | overlap 1143451 TGTTCTCGAATCTGA GAGCTTAACTTCA TAA TCAAGCTGAGCTC TTTTTGCGTAGTAGA TERM 1420 1143874 - 1143889 + H 84 -4.8 -5.27206 | AATTTACTAATTTTT TTAAAC ACTT GTTTAA TTTTTCTTCTGTCTG TERM 1421 1143977 - 1144000 + H 100 -7.4 -5.79595 | opp_overlap 1143978 1143979, overlap 1143979 GAGAGGTCGGAGAAA AGGCTCCCTA GTTT TAGGGAGCTA TTTTTTGTTTTCCCA TERM 1422 1143999 - 1143978 - H 90 -8.7 -4.38154 | opp_overlap 1143977 1143979, overlap 1143979 AGAGGTCGGAGAAAA GGCTCCCTA GTTT TAGGGAGCT ATTTTTTGTTTTCCC TERM 1423 1143998 - 1143979 - H 87 -12.2 -3.2241 | opp_overlap 1143977 1143979, overlap 1143978 GAGGTCGGAGAAAAG GCTCCCTA GTTT TAGGGAGC TATTTTTTGTTTTCC TERM 1424 1143979 - 1143998 + H 100 -12.2 -4.53077 | opp_overlap 1143979 1143978, overlap 1143977 GAGGTCGGAGAAAAG GCTCCCTA GTTT TAGGGAGC TATTTTTTGTTTTCC TERM 1425 1145121 - 1145099 - g 76 -7 -4.56597 | GCTGCGCGCGAAAAA GCAGAGCT GACAACT AGCCCTGC CCTTGCTATTCAGTT SSU05_1199 1144031 - 1145533 + | hypothetical protein TERM 1426 1145573 - 1145534 - T 100 -13.8 -3.89607 | opp_overlap 1145545, overlap 1145537 1145545 TATCAGAAAAACTAA GCACACAAAAAGACTTGC TCCG ACAAGTCTTTTTGTGAAC AGTAAAAAAGCAAGG TERM 1427 1145570 - 1145537 - T 100 -16.3 -2.99987 | opp_overlap 1145545, overlap 1145534 1145545 CAGAAAAACTAAGCA CACAAAAAGACTTGC TCCG ACAAGTCTTTTTGTG AACAGTAAAAAAGCA TERM 1428 1145562 - 1145545 - T 80 -6.3 -5.04175 | opp_overlap 1145545, overlap 1145537 1145534 CTAAGCACACAAAAA GACTTGC TCCG ACAAGTC TTTTTGTGAACAGTA TERM 1429 1145545 - 1145562 + T 75 -5.6 -4.83615 | opp_overlap 1145537 1145534 1145545 CTAAGCACACAAAAA GACTTG CTCCGA CAAGTC TTTTTGTGAACAGTA TERM 1430 1145602 - 1145583 - T 86 -5.7 -5.27779 | opp_overlap 1145583, overlap 1145575 GTGAACAGTAAAAAA GCAAGGA TTCAAT TCCCTGC TTTTTTCAACGATTA TERM 1431 1145583 - 1145602 + T 70 -3.5 -5.03145 | opp_overlap 1145575 1145583 GTGAACAGTAAAAAA GCAAGGA TTCAAT TCCCTGC TTTTTTCAACGATTA SSU05_1200 1147348 - 1145615 - | phosphoenolpyruvate-protein kinase TERM 1432 1147231 - 1147180 - G 80 -9.7 -3.71848 | gap 2, opp_overlap 1147186, overlap 1147182 1147186 CGTTCTCACGAATAA CAGAAAGCTCGTTTTGAGATGCTTC TAGA GCAGCATC-CAAA-CGAGCTTCCTC TGCATTTGTATCTTC TERM 1433 1147229 - 1147182 - G 100 -12.3 -3.44284 | gap 2, opp_overlap 1147186, overlap 1147180 1147186 TTCTCACGAATAACA GAAAGCTCGTTTTGAGATGCTTC TAGA GCAGCATC-CAAA-CGAGCTTCC TCTGCATTTGTATCT TERM 1434 1147186 - 1147225 + g 74 -9.5 -3.31598 | gap 2, opp_overlap 1147182 1147180 1147186 CACGAATAACAGAAA GCTCGTTTTGAGATGCTTC TAGA GCAGCATC-CAAA-CGAGC TTCCTCTGCATTTGT TERM 1435 1147225 - 1147186 - G 88 -9.5 -4.3587 | gap 2, opp_overlap 1147186, overlap 1147182 1147180 CACGAATAACAGAAA GCTCGTTTTGAGATGCTTC TAGA GCAGCATC-CAAA-CGAGC TTCCTCTGCATTTGT SSU05_1201 1147616 - 1147353 - | phosphocarrier protein HPr SSU05_1202 1148953 - 1147772 - | isocitrate dehydrogenase TERM 1436 1148171 - 1148161 - G 73 -5.4 -4.63218 | CCGGCGCCAATAAAA TCTG CTG CAGA AAGTTATCCGCAATA SSU05_1204 1150032 - 1148956 - | methylcitrate synthase SSU05_1203 1149801 - 1149941 + | hypothetical protein SSU05_1205 1152711 - 1150042 - | aconitate hydratase SSU05_1206 1153098 - 1153316 + | NrdH-redoxin SSU05_1207 1153349 - 1155508 + | ribonucleotide-diphosphate reductase subunit alpha SSU05_1208 1155554 - 1155748 + | hypothetical protein TERM 1437 1155948 - 1155931 - g 70 -2.7 -5.06816 | opp_overlap 1155931 ACTGCTGAAGAAAAA GACCT GGTTGGTA AGGTC TTTGGCGGATTGACC nrdF 1155775 - 1156734 + | ribonucleotide-diphosphate reductase subunit beta TERM 1438 1156795 - 1156823 + T 84 -10.2 -3.68936 | TTGTTTATCTTTGAC GTGAGGCTGGGC AAAAA GCCCAGCGCCAC TTCTTAGAGTTCGTG TERM 1439 1157064 - 1157030 - T 100 -9.5 -4.84761 | opp_overlap 1157030 AGATTGGCATAAAAA TAGGAATTCTCCC ACCAGTTAA GGGAAAATTCCTA TTTTTTGTATATATT TERM 1440 1157030 - 1157064 + T 100 -7.3 -5.46276 | opp_overlap 1157030 AGATTGGCATAAAAA TAGGAATTCTCCC ACCAGTTAA GGGAAAATTCCTA TTTTTTGTATATATT SSU05_1210 1158171 - 1157170 - | transcriptional regulator SSU05_1211 1160244 - 1158268 - | hypothetical protein TERM 1441 1160235 - 1160201 - G 76 -7.9 -4.07687 | gap 2, overlap 1160204 ATCGCTTCTCCAAAA GAAGAGAGG--CTGGGC AAA GCCCAGATCCACTCCTC AAAGTTCATATCAAT SSU05_1212 1161154 - 1160504 - | hyaluronidase TERM 1442 1160591 - 1160611 + g 70 -9.7 -2.52234 | overlap 1160590 1160607 TAAACTTGCTTCTTC TCCTGTCTG GGG CAGACGGGG CTTACTCGACTTTGT SSU05_1213 1161901 - 1161200 - | hyaluronidase SSU05_1214 1162460 - 1161969 - | hyaluronidase SSU05_1215 1164025 - 1162457 - | hyaluronidase TERM 1443 1164119 - 1164142 + r 77 -8.3 -3.93061 | opp_overlap 1164119, overlap 1164122 GGAGGCAAGAAAGAA GAACTACTT CGTAAA AAGTAGTTC TTTGGCTTTTCCCAT TERM 1444 1164142 - 1164119 - R 83 -9 -4.22554 | opp_overlap 1164119 1164122 GGAGGCAAGAAAGAA GAACTACTTC GTAA AAAGTAGTTC TTTGGCTTTTCCCAT SSU05_1216 1164430 - 1164122 - | preprotein translocase subunit YajC SSU05_1217 1165252 - 1164437 - | phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID SSU05_1218 1166015 - 1165239 - | phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC SSU05_1219 1166525 - 1166034 - | phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB SSU05_1220 1167740 - 1166535 - | hypothetical protein TERM 1445 1166580 - 1166566 - G 71 -4.2 -4.8543 | overlap 1166567 CAATCTTTATAAAAA CGAAGC AAA GCTTCT AAGTAATAATAATCG SSU05_1221 1168171 - 1167737 - | phosphotransferase system, mannose/fructose-specific component IIA TERM 1446 1168220 - 1168245 + r 82 -7.7 -4.3739 | opp_overlap 1168224, overlap 1168221 CACTTTGTATTGTAG ACTATTGACAA CCAC TTGTCAATAGA TTTTATAAAAAAATG TERM 1447 1168221 - 1168244 + r 80 -11.2 -3.22113 | opp_overlap 1168224, overlap 1168220 ACTTTGTATTGTAGA CTATTGACAA CCAC TTGTCAATAG ATTTTATAAAAAAAT TERM 1448 1168424 - 1168376 - R 100 -15.5 -3.01791 | overlap 1168398 ATTTCCCCTGTAACA TCTCACTTTCTCCCACATTCAAC CCC GTTGGAGGCAGGAGAAAGTGAAA ACGTTAAAAATACAG SSU05_1222 1169126 - 1168458 - | keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase SSU05_1223 1170111 - 1169110 - | ribokinase family sugar kinase SSU05_1224 1170769 - 1170128 - | hypothetical protein SSU05_1225 1171635 - 1170820 - | gluconate 5-dehydrogenase TERM 1449 1171657 - 1171681 + r 70 -8.1 -3.31365 | overlap 1171660 1171672 AACTCCCTTGTATTT TAATTTGTAAA GCG TTTACAAATTG TATTGTAATATAGTA TERM 1450 1171660 - 1171678 + r 72 -7.6 -3.78879 | overlap 1171657 1171672 TCCCTTGTATTTTAA TTTGTAAA GCG TTTACAAA TTGTATTGTAATATA TERM 1451 1172109 - 1172083 - R 100 -11 -5.64421 | ACTCTAAATAAAAAA TACCCTATTGCA ACG TGCAACAAGGTA CCATCTATCTCAATC TERM 1452 1172188 - 1172202 + r 80 -8.6 -3.91716 | overlap 1172185 TACTTCGACGAGCGA GGAAAC GTC GTTTCC TTATTTCCAACCTAG TERM 1453 1172599 - 1172647 + r 100 -16.3 -3.22774 | opp_overlap 1172618 1172621 1172645, overlap 1172618 1172646 CAAACATTATTTCAA TCCTTATTTCTGTCCAAATTCAC CCA GTGATTTGGGATAGAAATAGGGA TTCCTCATCGCTCTG SSU05_1226 1173840 - 1172713 - | transposase SSU05_1227 1174352 - 1173948 - | metal-dependent membrane protease SSU05_1228 1174736 - 1174632 - | hypothetical protein SSU05_1229 1175592 - 1174960 - | hypothetical protein SSU05_1230 1175855 - 1175676 - | hypothetical protein SSU05_1231 1176674 - 1176249 - | hypothetical protein SSU05_1232 1176880 - 1176671 - | Cro/CI family transcriptional regulator TERM 1454 1176901 - 1176925 + r 75 -7.2 -4.21343 | overlap 1176903 ATAAATTTTCCTTTC TAGGCTTGGT AGATA ATCAAGCCTG TTTCTGTGTCTTCGA TERM 1455 1176903 - 1176923 + r 72 -7.6 -3.6979 | overlap 1176901 AAATTTTCCTTTCTA GGCTTGGT AGATA ATCAAGCC TGTTTCTGTGTCTTC SSU05_1233 1177430 - 1176900 - | surface antigen negative regulator Par SSU05_1234 1177644 - 1177477 - | hypothetical protein SSU05_1235 1178085 - 1177906 - | hypothetical protein TERM 1456 1178175 - 1178185 + r 100 -4 -6.38039 | TATTTCAAAATCATT GTAA CAA TTAC TTTTTTTTTTGACTA TERM 1457 1178304 - 1178280 - R 100 -10.1 -5.17054 | opp_overlap 1178280 ATAACATGCAAAAAA CTCTTCTACCC AAT GGATAAAAGAG TTTATTGAGCGATTA alaS 1180935 - 1178317 - | alanyl-tRNA synthetase TERM 1458 1178651 - 1178667 + g 100 -13.7 -5.27335 | opp_overlap 1178643 1178645 1178648, overlap 1178649 TTGAAGACATCACCA GCAGCGG CTG CCGCTGC TTTTTCTTTCAGAGC TERM 1459 1180978 - 1181017 + r 70 -3.1 -5.01732 | gap 2, opp_overlap 1180983 1180987, overlap 1180983 GGCGACTGAAAAATA GG-AAACTGAC-AGGAAAT CTTG ATTTCCTAGGCAGTTTATC TTTTTTCCGAGCCTT TERM 1460 1180983 - 1181011 + r 73 -5.4 -4.64992 | gap 1, opp_overlap 1180983 1180987, overlap 1180978 CTGAAAAATAGGAAA CTGAC-AGGAAAT CTTG ATTTCCTAGGCAG TTTATCTTTTTTCCG SSU05_1237 1181715 - 1181215 - | hypothetical protein SSU05_1238 1183014 - 1181968 - | parvulin-like peptidyl-prolyl isomerase SSU05_1239 1183791 - 1183030 - | O-methyltransferase TERM 1461 1183709 - 1183726 + g 71 -4.1 -4.85129 | TTGACAACCGGACGG CGCATAT TGTG ATTTGCG TTTTTACTATATGAT TERM 1462 1183817 - 1183802 - R 76 -6.8 -4.43213 | opp_overlap 1183802 CTCAATACACTAAAA GGTAGG TTTC CCCACC TTTTCTCTACATATT SSU05_1240 1183934 - 1183824 - | hypothetical protein SSU05_1241 1184373 - 1183921 - | hypothetical protein TERM 1463 1184100 - 1184086 - G 76 -2.8 -5.29385 | AAGGCAATCAAAAAA GTAGAT AAA ATCTTC AAGATTGTCCTTATA SSU05_1242 1184853 - 1184389 - | hypothetical protein SSU05_1243 1186633 - 1184831 - | oligoendopeptidase F TERM 1464 1186504 - 1186515 + g 75 -3 -5.22039 | CCAGTAAATGACCTG CAAA TTCT TTTG TTTTTTCAGTTTCAG TERM 1465 1186697 - 1186671 - R 100 -7.2 -5.47159 | opp_overlap 1186671 1186672, overlap 1186672 TTCTAACATAAAAAA TCCCCTCTTTCC AAC GGAAAGTGAGGG CTTATAGGTTACTTA TERM 1466 1186696 - 1186672 - R 88 -10.7 -3.87211 | opp_overlap 1186672 1186671, overlap 1186671 TCTAACATAAAAAAT CCCCTCTTTCC AAC GGAAAGTGAGG GCTTATAGGTTACTT SSU05_1244 1187805 - 1186864 - | competence protein TERM 1467 1187857 - 1187839 - R 100 -9.6 -5.41143 | opp_overlap 1187839 TAGTTCGTAAAAAAA CACCCAGT TTA ACTGAGTG TTTGAAATTTTTTAC TERM 1468 1187839 - 1187857 + r 71 -7.4 -3.8374 | opp_overlap 1187839 TAGTTCGTAAAAAAA CACCCAGT TTA ACTGAGTG TTTGAAATTTTTTAC SSU05_1245 1189677 - 1187869 - | methionyl-tRNA synthetase TERM 1469 1188227 - 1188237 + g 75 -3.2 -5.19251 | AGTTCCACGTCAGCT GGGT TCC ACTC TTTTTCTTCCTCTTG SSU05_1246 1189873 - 1189721 - | methionyl-tRNA synthetase SSU05_1247 1190029 - 1190622 + | hypothetical protein SSU05_1248 1190768 - 1190673 - | hypothetical protein TERM 1470 1190863 - 1190835 - H 73 -5.5 -4.60797 | opp_overlap 1190844 TCCTTATATATAAAA TATTCAGAATTTA CTG TAAATTCTACATA AAATCATGGATATTG SSU05_1249 1190923 - 1191960 + | phospho-2-dehydro-3-deoxyheptonate aldolase SSU05_1250 1191970 - 1192995 + | phospho-2-dehydro-3-deoxyheptonate aldolase aroE 1193041 - 1193910 + | shikimate 5-dehydrogenase TERM 1471 1194102 - 1194115 + G 70 -5.3 -4.50298 | overlap 1194086 AAGCTTAGAACAAGC TGGTT TTGA AACCA TTGTTTTTGAATTTC aroB 1193923 - 1194990 + | 3-dehydroquinate synthase TERM 1472 1195155 - 1195189 + T 100 -7.3 -5.626 | opp_overlap 1195158, overlap 1195158 TGACGATATAAGAAA AAAGACTACTGACTT GCATG AAATCAGTAGTCTTA TTTTTTTATAAAATC TERM 1473 1195186 - 1195158 - T 100 -11.2 -5.60689 | opp_overlap 1195158 1195155 CGATATAAGAAAAAA GACTACTGACTT GCATG AAATCAGTAGTC TTATTTTTTTATAAA TERM 1474 1195158 - 1195186 + T 100 -9 -4.89054 | opp_overlap 1195158, overlap 1195155 CGATATAAGAAAAAA GACTACTGACTT GCATG AAATCAGTAGTC TTATTTTTTTATAAA SSU05_1253 1195995 - 1195195 - | ABC-type uncharacterized transport system, ATPase component SSU05_1254 1196598 - 1196005 - | ABC-type uncharacterized transport system, permease component TERM 1475 1196500 - 1196513 + g 70 -3.9 -4.82901 | opp_overlap 1196499 AACCAAACCAATCAC CAAAA CAGC TTTTG TTTTTGTCAAACCAA TERM 1476 1196559 - 1196591 + g 72 -6.3 -4.37711 | opp_overlap 1196570, overlap 1196560 1196561 1196570 TCACTAAAGTTTCTT GCTTAAGCAAAGCCA CAT TGGCTTTGCCTAAAA TTTTCAATTTGATGG TERM 1477 1196560 - 1196590 + g 74 -9.8 -3.21904 | opp_overlap 1196570, overlap 1196559 1196561 1196570 CACTAAAGTTTCTTG CTTAAGCAAAGCCA CAT TGGCTTTGCCTAAA ATTTTCAATTTGATG TERM 1478 1196561 - 1196589 + g 91 -13.3 -2.52419 | opp_overlap 1196570, overlap 1196560 1196559 1196570 ACTAAAGTTTCTTGC TTAAGCAAAGCCA CAT TGGCTTTGCCTAA AATTTTCAATTTGAT SSU05_1255 1196898 - 1196608 - | ABC-type uncharacterized transport system, permease component SSU05_1256 1197927 - 1196953 - | hypothetical protein SSU05_1257 1198908 - 1198009 - | ABC transporter permease protein TERM 1479 1198977 - 1198948 - R 100 -9.4 -5.69793 | opp_overlap 1198948 ATAGCAAACAAAAAA GGACCGCTTAAA CTACAC TCTAAACGGTCC TTATATTTCATCTGT SSU05_1258 1200653 - 1199598 - | tagatose 1,6-diphosphate aldolase SSU05_1259 1201839 - 1200646 - | N-acetylglucosamine-6-phosphate deacetylase TERM 1480 1201985 - 1201931 - R 86 -5.3 -5.3236 | gap 2, overlap 1201920 AGAAGGTAGAAAAAA GAGTTCTTACTGCCCTAAGTACCGTTT CTG AATCTGTACTTGGAG-A-TAAGAACTC TACGTAAGCAGTGTA SSU05_1260 1202392 - 1202054 - | hypothetical protein TERM 1481 1202170 - 1202184 + g 78 -4.3 -5.13722 | TTCCCTGAACTTTCT TGTTG AAATC CAACA TTTTCTTTTGGTCAG SSU05_1261 1203505 - 1202402 - | prephenate dehydrogenase TERM 1482 1203369 - 1203381 + g 70 -7.7 -3.6501 | overlap 1203370 TCATCAACCATCCCC TTGCC CAA GGCAA TTTGGCATGATTGTT SSU05_1262 1204679 - 1203513 - | chorismate synthase aroD 1205357 - 1204683 - | 3-dehydroquinate dehydratase SSU05_1264 1206517 - 1205354 - | SAM-dependent methyltransferase TERM 1483 1206150 - 1206140 - G 75 -5.4 -4.76087 | GACAGAATAAATAAA GGTA TTA TACC ATGAAAAAACTGCGT TERM 1484 1206662 - 1206642 - g 70 -2.5 -5.03314 | overlap 1206646 TTTATTGTGAAAAAA CTAATTGAC TAT GTCAAGAAG AGCGGACAGACTAGA SSU05_1265 1206633 - 1206959 + | phosphoglycerol transferase/alkaline phosphatase superfamily protein SSU05_1266 1206959 - 1208812 + | phosphoglycerol transferase/alkaline phosphatase superfamily protein TERM 1485 1208868 - 1208820 - T 84 -12.2 -2.75826 | opp_overlap 1208825, overlap 1208825 CACGGTAATACACTA TAAAAGGCTTAGAATC-ATGTCAG TTA CT-ACATTGATTCTAAGCCTTTTT ATACTCAATGAAAAT TERM 1486 1208863 - 1208825 - T 100 -12.1 -4.5477 | opp_overlap 1208825, overlap 1208820 TAATACACTATAAAA GGCTTAGAATC-ATGTCAG TTA CT-ACATTGATTCTAAGCC TTTTTATACTCAATG TERM 1487 1208825 - 1208863 + T 100 -12.1 -4.9218 | opp_overlap 1208825 1208820 TAATACACTATAAAA GGCTTAGAATC-ATGTCAG TTA CT-ACATTGATTCTAAGCC TTTTTATACTCAATG SSU05_1267 1211539 - 1209008 - | Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit TERM 1488 1211826 - 1211793 - R 90 -9.1 -4.58395 | opp_overlap 1211792 1211793 1211797, overlap 1211797 GCTACTTTCCAAAAA TAAAGAACCTGGT TCATCACT ACCAAGTTCTTTA CATTTTTATACTTAT TERM 1489 1211822 - 1211797 - R 75 -5.5 -4.85782 | opp_overlap 1211793 1211792 1211797, overlap 1211793 CTTTCCAAAAATAAA GAACCTGGT TCATCACT ACCAAGTTC TTTACATTTTTATAC rplT 1212191 - 1211838 - | 50S ribosomal protein L20 rpmI 1212442 - 1212242 - | 50S ribosomal protein L35 TERM 1490 1212458 - 1212468 + r 75 -5.4 -4.77122 | overlap 1212453 GTTAATTCTCCTTTT GCTT AAA AAGC TTATTTTTTATCTGA infC 1212975 - 1212469 - | translation initiation factor IF-3 TERM 1491 1213051 - 1213031 - R 100 -11.9 -4.38116 | TCGAGAAAAACGAAA CGGACTTGC TAA ACAAGTCCG CACTACACCATTATT cmk 1213848 - 1213171 - | cytidylate kinase SSU05_1273 1214334 - 1213858 - | hypothetical protein TERM 1492 1214465 - 1214478 + Gr 77 -4.5 -5.00884 | ATTCGATTATGATGA CGACG GTAT CGTTG TTTTTTCAGACGACT SSU05_1272 1214319 - 1214579 + | ferredoxin SSU05_1274 1215056 - 1214568 - | hypothetical protein TERM 1493 1215113 - 1215092 - R 100 -8.1 -5.67063 | opp_overlap 1215090 1215092 TCTAGCACAAAAAAA GAGATTTTC CTAT GAAAACCTC TATCTTTTGAAATTT SSU05_1275 1216009 - 1215239 - | cell wall biosynthesis glycosyltransferase SSU05_1276 1216355 - 1215999 - | hypothetical protein SSU05_1277 1217071 - 1216355 - | cell wall biosynthesis glycosyltransferase SSU05_1278 1218428 - 1217175 - | glycosyltransferase SSU05_1279 1220488 - 1218428 - | lipopolysaccharide biosynthesis protein TERM 1494 1219501 - 1219485 - G 76 -8.1 -4.11216 | overlap 1219497 TCTCTAGTTTTAAAA TCTTCTA ATA TAGAAGA CACCACTTCGATCGG SSU05_1280 1221478 - 1220498 - | cell wall biosynthesis glycosyltransferase SSU05_1281 1222485 - 1221481 - | lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases SSU05_1282 1223872 - 1222493 - | hypothetical protein SSU05_1284 1225056 - 1223797 - | polysaccharide/teichoic acid transporter, putative SSU05_1283 1224624 - 1224788 + | hypothetical protein SSU05_1285 1226852 - 1225089 - | polysaccharide biosynthesis protein TERM 1495 1226663 - 1226649 - G 73 -10 -3.03657 | overlap 1226645 1226648 1226651 GATAAAAAAATCAAT CAGTCG TTC CGACTG TAAATATTGTACTAT SSU05_1286 1228048 - 1226834 - | ABC-type polysaccharide/polyol phosphate transport system, ATPase component SSU05_1287 1228854 - 1228048 - | ABC-type polysaccharide/polyol phosphate export system, permease component TERM 1496 1228505 - 1228491 - G 72 -7.2 -3.99432 | CAAATACAAACACAA CCATTA AGT TAATGG CGTAATTAATTGCAG SSU05_1288 1229786 - 1228857 - | polysaccharide biosynthesis protein/putative rhamnosyl transferase TERM 1497 1229802 - 1229817 + r 70 -3.2 -5.02476 | TGTAAAAATAATTCC TCGTAC TCTT GGACGA TTTTTTCCCAGGTGT SSU05_1289 1229875 - 1229783 - | glycosyltransferase SSU05_1290 1230720 - 1229914 - | glycosyltransferase SSU05_1291 1230932 - 1230717 - | glycosyltransferase TERM 1498 1232638 - 1232648 + G 73 -5.4 -4.62471 | opp_overlap 1232638 TTTATACAGAATGAA TCAC AGA GTGA TTTTTCAAACTTACA SSU05_1292 1231135 - 1233696 + | phosphoglycerol transferase/alkaline phosphatase superfamily protein TERM 1499 1233730 - 1233703 - T 100 -14.3 -4.88736 | opp_overlap 1233703 TATGAGTGATAAAAA TAGCCTTGCTC GGTTTT GAGCAAGGCTA TTTTATCATCAATCA TERM 1500 1233703 - 1233730 + T 100 -15 -4.4767 | opp_overlap 1233703 TATGAGTGATAAAAA TAGCCTTGCTCG GTTT TGAGCAAGGCTA TTTTATCATCAATCA SSU05_1293 1234142 - 1233756 - | muramidase (flagellum-specific) SSU05_1294 1237369 - 1234262 - | N-acetylmuramoyl-L-alanine amidase SSU05_1295 1238525 - 1237407 - | hypothetical protein SSU05_1296 1239318 - 1238467 - | dTDP-4-dehydrorhamnose reductase TERM 1501 1239341 - 1239362 + rH 91 -11.5 -3.86322 | opp_overlap 1239341 CCTTATTTCAAGAAA GGCTTGGGC AAGA GCCCTAGCC TTTAATAATCTTATT TERM 1502 1239362 - 1239341 - RH 91 -11.5 -4.1822 | opp_overlap 1239341 CCTTATTTCAAGAAA GGCTTGGGC AAGA GCCCTAGCC TTTAATAATCTTATT SSU05_1298 1240566 - 1239373 - | dTDP-glucose 4,6-dehydratase SSU05_1297 1239848 - 1239940 + | hypothetical protein TERM 1503 1240421 - 1240435 + gT 100 -3.6 -6.28401 | overlap 1240422 1240430 TTAAATTGAGACATT TTTTTC TCC GAAAAG TTTTTTTCTTTTTTG TERM 1504 1240430 - 1240443 + gT 84 -3.9 -5.43414 | overlap 1240422 1240421 GACATTTTTTTCTCC GAAAA GTTT TTTTC TTTTTTGTGTGTCAT TERM 1505 1240528 - 1240507 - GT 81 -9.5 -3.78775 | gap 1, opp_overlap 1240507 TGTTTCATTACTAAA CCATGAG-CC TAA GGTCTCATGG TTTCCCCCGCTCCTT TERM 1506 1240507 - 1240528 + gT 78 -9.5 -3.54919 | gap 1, opp_overlap 1240507 TGTTTCATTACTAAA CCATGAG-CC TAA GGTCTCATGG TTTCCCCCGCTCCTT TERM 1507 1240537 - 1240559 + gT 89 -12 -3.35679 | CTCATGGTTTCCCCC GCTCCTTAGC AAA GCAAAGGAGC TTCTCACTACGGCGA SSU05_1299 1241093 - 1240608 - | hypothetical protein SSU05_1300 1241686 - 1241093 - | dTDP-4-dehydrorhamnose 3,5-epimerase TERM 1508 1241631 - 1241605 - G 79 -11 -3.14132 | GGTTGTCGCCATGAA CAGGAATGTCAA ATT CTAACATTCCTG GAATAGCTTCAACTG SSU05_1301 1242555 - 1241686 - | glucose-1-phosphate thymidylyltransferase TERM 1509 1242303 - 1242289 - G 72 -6.4 -4.33417 | TTCACCGATAATAAA GGCTTG CGC CAAACC ATCTGGACTTGGTTG TERM 1510 1242643 - 1242628 - R 88 -5.4 -5.55769 | opp_overlap 1242628 TGTCATAAGAAAAAA GCCTGT GACG ACAGAC TTTAACAAATTATCC SSU05_1302 1243486 - 1242653 - | divalent heavy-metal cations transporter TERM 1511 1243242 - 1243210 - G 82 -3.3 -5.47399 | CCAAGCGTAAAAAAA TACCACCTGCTGCAA AAC CTACTGCTGCTGGTA TCCAAGCCAGATTGC TERM 1512 1243589 - 1243577 - R 73 -3.5 -5.10765 | AAATAAATAAGAAAA TATTT AAA AAATA AAAGACCTAAAACTA TERM 1513 1243624 - 1243593 - R 91 -6 -5.43553 | gap 1, opp_overlap 1243593 ATTTAAAAAATAAAA GACCTAAAACTACAT TAA ATGTCGTCTT-GGTC TTTCCACAATCAAGT SSU05_1303 1244447 - 1243653 - | hypothetical protein TERM 1514 1244052 - 1244065 + g 70 -8.1 -3.65902 | CACACGGCCAAGCCC CTGCC CCTC GGCAG TTTCAATCAAGTAGG SSU05_1304 1245159 - 1244437 - | SAM-dependent methyltransferase SSU05_1305 1245796 - 1245122 - | putative primosome component and related proteins TERM 1515 1245266 - 1245281 + gr 71 -3.3 -4.96427 | GTTTCGTAGAATAGC TTGGA TGTATT TCCAA TTTGTTTTGTTGTTA SSU05_1306 1246798 - 1245806 - | homoserine O-succinyltransferase SSU05_1307 1247363 - 1246851 - | adenine phosphoribosyltransferase TERM 1516 1247771 - 1247826 + r 83 -9.2 -3.98378 | gap 2 AACCTAATCAACTGT GCGGGGGTGGGAAGACGAACTCTTTT TAGACC AGTCGAGTTC-T-TTCCCACTCCCGC TTATTATTAGCTCTG SSU05_1308 1248692 - 1247796 - | hypothetical protein SSU05_1309 1250884 - 1248671 - | single-stranded DNA-specific exonuclease TERM 1517 1250044 - 1250056 + g 70 -7.7 -3.72775 | opp_overlap 1250044, overlap 1250042 TCAACCTCGGAGCAA GTTGG AAA CCAAC TGTTTCTTCATCAAT SSU05_1310 1252587 - 1251040 - | phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthase-like protein TERM 1518 1252859 - 1252825 - g 74 -5 -4.84311 | opp_overlap 1252827, overlap 1252826 1252827 TTTCATATAAGAAAA GGCTGTTGAATCAAGT CCT ACTTGCCTCAACAGTT CTTTTAGCTGCATCT TERM 1519 1252858 - 1252826 - g 71 -8.5 -3.49864 | opp_overlap 1252827, overlap 1252825 1252827 TTCATATAAGAAAAG GCTGTTGAATCAAGT CCT ACTTGCCTCAACAGT TCTTTTAGCTGCATC TERM 1520 1252857 - 1252827 - g 83 -12 -2.69195 | opp_overlap 1252827, overlap 1252826 1252825 TCATATAAGAAAAGG CTGTTGAATCAAGT CCT ACTTGCCTCAACAG TTCTTTTAGCTGCAT TERM 1521 1252827 - 1252857 + G 88 -9.8 -4.22214 | opp_overlap 1252827 1252826 1252825 TCATATAAGAAAAGG CTGTTGAATCAAGT CCT ACTTGCCTCAACAG TTCTTTTAGCTGCAT SSU05_1311 1252803 - 1255988 + | hypothetical protein TERM 1522 1256020 - 1256001 - T 73 -6.4 -4.35116 | opp_overlap 1256001 TAGTCTACACGAAAA CGCCGA GTTTTATT TCGGCG TTTTTCTATGCTTAT TERM 1523 1256001 - 1256020 + T 85 -7.1 -5.05079 | opp_overlap 1256001 TAGTCTACACGAAAA CGCCGAG TTTTAT TTCGGCG TTTTTCTATGCTTAT SSU05_1312 1256787 - 1256032 - | Short-chain dehydrogenase of various substrate specificities TERM 1524 1256628 - 1256650 + g 82 -3.4 -5.55664 | overlap 1256620 GAGCTATTTCGTCTC GGATGTCT ACATCAA AGACAGCC TTTTTTTCATGGTAA SSU05_1313 1257713 - 1256784 - | ribonuclease Z SSU05_1314 1258353 - 1257724 - | HrpA-like helicase TERM 1525 1258036 - 1258026 - G 71 -3.2 -5.02074 | CTACTTCCGAAAAAA CCTG GGC CAGA CCGTCCGCCGACACA SSU05_1315 1259587 - 1258337 - | GTPase miaA 1260464 - 1259580 - | tRNA delta(2)-isopentenylpyrophosphate transferase TERM 1526 1260655 - 1260643 - g 80 -6.3 -4.84492 | TGAACCAGAAGAAAA GAAAG AAG CTTTC ATTGAGGAAAATCGT SSU05_1317 1260473 - 1260703 + | hypothetical protein TERM 1527 1260723 - 1260707 - T 74 -5.1 -4.8048 | opp_overlap 1260707 GTGGCACATTAAAAA GCTGG CAAATGT CCAGC TTTTTTTGTTTGACA TERM 1528 1260707 - 1260723 + T 91 -5.1 -5.95539 | opp_overlap 1260707 GTGGCACATTAAAAA GCTGG CAAATGT CCAGC TTTTTTTGTTTGACA TERM 1529 1260795 - 1260744 - T 90 -6.9 -5.24129 | opp_overlap 1260744 TTGTTTGACAAAAAA TCCCTT-AGAAGCTCTGCCATTTTC ACAG AAAAATGCCAGC-CTTCTTAAGGGA TTATACTTTATAAGA SSU05_1318 1261123 - 1260803 - | cyanate permease SSU05_1319 1261970 - 1260825 - | cyanate permease TERM 1530 1260984 - 1261002 + g 73 -7.4 -4.18506 | overlap 1260980 ATTCCTGATAACTGG GCAGTAGC CTG GCTGTTGC TTGTTTTCCAAGTAA TERM 1531 1261659 - 1261647 - GH 73 -6.3 -4.38843 | opp_overlap 1261637, overlap 1261637 CAAAACATTAATAAA TGCTA TTG TAGCA CCAACAAGCATTGTA TERM 1532 1262339 - 1262326 - g 77 -3.9 -5.09895 | CACTCATCCAAAAAA TTGTT GCAG AACAA AAAGAAAACGGTTTG SSU05_1320 1262169 - 1263317 + | hypothetical protein TERM 1533 1263404 - 1263435 + T 84 -7.5 -4.66537 | opp_overlap 1263404 ATCTATGATATCTAA TCCCAAGTATT TTTCCGATGT AATACTTGGGA TTTTATGTTCGGACA TERM 1534 1263912 - 1263923 + T 78 -3.6 -5.28561 | ATCGCTTACAGTATC GTCC ATTT GGGC TTTTTATTGTATATT SSU05_1321 1265009 - 1263987 - | phosphate starvation-inducible protein PhoH, ATPase TERM 1535 1265068 - 1265052 - R 76 -4.4 -5.22006 | opp_overlap 1265052 1265047 CTATTATAACAAAAA TAGCCC AAACA AGGCTA TTTTGTACTATTTTA SSU05_1322 1265303 - 1265088 - | hypothetical protein SSU05_1323 1265764 - 1265309 - | hypothetical protein SSU05_1324 1266694 - 1265774 - | 2-dehydropantoate 2-reductase SSU05_1325 1267612 - 1266704 - | hypothetical protein TERM 1536 1267612 - 1267583 - G 77 -6.4 -4.72272 | opp_overlap 1267584, overlap 1267584 CTTTCTGATTAAAAA GTGGGGGAAGTC TTGTCT AACTCCCCCCAT TAGATTTCTTATTGG TERM 1537 1267611 - 1267584 - G 78 -9.9 -3.43042 | opp_overlap 1267584, overlap 1267583 TTTCTGATTAAAAAG TGGGGGAAGTC TTGTCT AACTCCCCCCA TTAGATTTCTTATTG frr 1268247 - 1267690 - | ribosome recycling factor pyrH 1269203 - 1268382 - | uridylate kinase TERM 1538 1269213 - 1269191 - G 87 -4.9 -5.45652 | ATCTCCAAGAAAAAA GGAAAATCC TCAAC GAACTTTCC TTCTCACATTCTAAA SSU05_1328 1270923 - 1269283 - | O-antigen and teichoic acid export protein TERM 1539 1271064 - 1271048 - R 100 -10.1 -5.56372 | AAAGTAAAAGAAAAA CCCACCC ATA AGGTGGG CAAGTCAATTAATTA SSU05_1329 1271860 - 1271177 - | glutathione S-transferase SSU05_1330 1272207 - 1271869 - | hypothetical protein TERM 1540 1272255 - 1272238 - R 100 -2.7 -6.3578 | ATCTCAAAAAAAAAA GATTGCC CTAA AACAATC TTTCTATTGATTAAA rplA 1272955 - 1272266 - | 50S ribosomal protein L1 TERM 1541 1272295 - 1272309 + g 71 -8.6 -3.42996 | opp_overlap 1272275 GATCAACTTTGATAC CAACAC CTT GTGTTG TTGTAATAAATACTG rplK 1273421 - 1272996 - | 50S ribosomal protein L11 TERM 1542 1273166 - 1273207 + g 72 -6.5 -4.30576 | overlap 1273169 TACCTGAACCTTTTT CAACACCTGCAGCTTTTTT CAAA AGAACAGCAGCTGGTGGTG TTTTAGTGATGAAAG TERM 1543 1273497 - 1273481 - H 77 -8.1 -3.86897 | opp_overlap 1273475 1273481 1273480 1273483 TTTACCTCCCACAAA TATGTGT TTT ACACATA CCTTTTCATTATACA TERM 1544 1273819 - 1273838 + G 75 -2.2 -5.36441 | overlap 1273822 GGTCTTTGCGGTTTC TTCCTTTT AAAG AAAAAGAA TTTTTTATATCGACG SSU05_1333 1273576 - 1273944 + | hypothetical protein TERM 1545 1273975 - 1274004 + T 100 -11.5 -4.9218 | opp_overlap 1273978, overlap 1273978 CATAGATGGCATAAT AAATCCCCATTGC AGGC GCAGTGGGGATTC TTTTTATACTAAATC TERM 1546 1274001 - 1273978 - T 90 -11 -4.32579 | opp_overlap 1273978 1273975 AGATGGCATAATAAA TCCCCATTGC AGGC GCAGTGGGGA TTCTTTTTATACTAA TERM 1547 1273978 - 1274001 + T 100 -13.2 -4.56153 | opp_overlap 1273978, overlap 1273975 AGATGGCATAATAAA TCCCCATTGC AGGC GCAGTGGGGA TTCTTTTTATACTAA TERM 1548 1274090 - 1274109 + T 91 -13.6 -2.53581 | AGGTGCAGGTTGCTA GCACAGCC TAGT GGCTGTGC TAGGTTGGAGATATA SSU05_1334 1274698 - 1274312 - | lactoylglutathione lyase and related lyases SSU05_1335 1277067 - 1274698 - | DNA segregation ATPase FtsK/SpoIIIE and related proteins TERM 1549 1276040 - 1276050 + g 75 -5.4 -4.87291 | ACTTTAATATTCTGA CGAA CAA TTCG TTTTTCATTGGACTG TERM 1550 1277150 - 1277135 - R 91 -6.8 -5.39721 | opp_overlap 1277135 TCATGATAGAAAAAA CCCTGC AAAT ACAGGG TTTCTCTTGGAGTGA SSU05_1336 1277294 - 1277193 - | Beta-fructosidases (levanase/invertase) SSU05_1337 1278552 - 1277287 - | Beta-fructosidases (levanase/invertase) TERM 1551 1278296 - 1278337 + g 90 -11.7 -3.68366 | gap 1, overlap 1278292 1278300 TCGTAAGCTTTATCA GGAGCTAGGTCAACTGGAAG TTG TTCCCAGTTGACCAAG-TCC TTACTTTTCGCATGC TERM 1552 1278300 - 1278334 + g 86 -12.2 -2.94333 | overlap 1278296 1278292 AAGCTTTATCAGGAG CTAGGTCAACTGGAAG TTG TTCCCAGTTGACCAAG TCCTTACTTTTCGCA SSU05_1338 1280189 - 1278570 - | ABC-type sugar transport system, periplasmic component SSU05_1339 1281114 - 1280227 - | ABC-type sugar transport system, permease component SSU05_1340 1282140 - 1281124 - | ABC-type polysaccharide transport system, permease component TERM 1553 1282058 - 1282069 + g 75 -3 -5.18726 | opp_overlap 1282064 ATAAGAACTCCTTTT TGAA ACGT TTCA TTTTTCTTGTGAAAA TERM 1554 1282145 - 1282155 + r 77 -2.6 -5.47914 | TTTTCTGTCAACTGC TTTT TTA AAAA TTTTTTGTAGTTTTT SSU05_1341 1283138 - 1282149 - | transcriptional regulator TERM 1555 1283272 - 1283237 - R 100 -10 -5.33405 | gap 1, opp_overlap 1283247 GTTAGCAAATAAAAA CACCCAAAAAGCTAGAA TGA TTCTAACTTT-TGAGTG CCGTTTAAAAATCTT SSU05_1342 1283813 - 1283295 - | hypothetical protein SSU05_1343 1284270 - 1283842 - | lactoylglutathione lyase and related lyases TERM 1556 1284312 - 1284298 - H 95 -7.8 -5.27335 | TTCTCCAAAGAAAAA CGACTC TTA GAGCCG TTCAAAACCTAGGAA TERM 1557 1284358 - 1284344 - H 70 -6.4 -4.08216 | opp_overlap 1284344 1284349 CGAGTCCCCTGAAAA TGCAGG GTG CCTACA TCTCTCTCTGCTAAA TERM 1558 1284966 - 1284947 - g 71 -9.4 -3.05463 | overlap 1284949 1284959 ACTGCTTCTAGCCAA TATGCCAA AGAT TTGGCATA CGCCATTAACAATCC SSU05_1344 1284800 - 1285603 + | peptidyl-prolyl cis-trans isomerase TERM 1559 1285609 - 1285658 + F 84 -8 -4.70659 | CACCTTTTAAAAATG GGTTCTATAATTTCTGTAGTGG GTAAAA CCACCGTGGAGATTATGGAGCC TTTTTGAGTATAGAA TERM 1560 1286978 - 1286956 - g 100 -12.8 -4.68511 | opp_overlap 1286953 1286960 TTGAACATAAAGAAA GAGAGAACGA AGT TCGTCCTCTC TAGGTGTTAGCTTTT SSU05_1345 1285696 - 1286988 + | transposase TERM 1561 1287069 - 1287029 - T 100 -30.1 -4.6856 | opp_overlap 1287029 1287033 CAAAGAGCCTAAAAA TGAAGCTGGGCAAGACATC ATA GATGTCTTGCCCAGCTTCA TGTATACTATCATAT TERM 1562 1287029 - 1287069 + T 100 -30.1 -2.98986 | opp_overlap 1287029, overlap 1287033 CAAAGAGCCTAAAAA TGAAGCTGGGCAAGACATC ATA GATGTCTTGCCCAGCTTCA TGTATACTATCATAT TERM 1563 1287033 - 1287065 + T 100 -25.1 -3.34534 | opp_overlap 1287029, overlap 1287029 GAGCCTAAAAATGAA GCTGGGCAAGACATC ATA GATGTCTTGCCCAGC TTCATGTATACTATC TERM 1564 1287161 - 1287151 - T 78 -5.4 -4.93296 | CTACCACTAGAAAAA GTTC ACT GAAC CTCGACGCAGTAGGC SSU05_1346 1288258 - 1287287 - | peptide chain release factor RF-3 SSU05_1347 1288832 - 1288224 - | peptide chain release factor RF-3 TERM 1565 1288995 - 1288980 - H 72 -7.6 -3.71924 | opp_overlap 1288977 1288975 1288980, overlap 1288969 CAAACTATTGAAGAA TAGGTC TACA GACCTA TACTATTGTATTATA TERM 1566 1289098 - 1289087 - g 78 -4.4 -5.24515 | overlap 1289082 AACAAACAAATAAAA GGTT TATC AACC AAGGAAGTACAAGAA TERM 1567 1289389 - 1289419 + G 77 -10.6 -3.14146 | overlap 1289373 1289394 TGTTCGCGATAGCGA GACAATATCTATTG CAC CAGAAGATATTGTC TTAGATGATGTTCTC TERM 1568 1290180 - 1290153 - g 71 -10 -2.65112 | overlap 1290144 AAGCTAGTCACATCA TCCCATTTTCTA GTGA TAGAAAATGGGG GGCAATGACAATAGA SSU05_1348 1289069 - 1291405 + | cation transport ATPase TERM 1569 1291409 - 1291438 + T 100 -11 -5.14477 | opp_overlap 1291409 TTTAAAAACTAAAAA TAAGACTTGAAA AACTAA TTTCAAGTCTTA TTTTTTCAATATATG TERM 1570 1291438 - 1291409 - T 100 -11 -5.18355 | opp_overlap 1291409 TTTAAAAACTAAAAA TAAGACTTGAAA AACTAA TTTCAAGTCTTA TTTTTTCAATATATG SSU05_1349 1292194 - 1291436 - | major facilitator superfamily permease TERM 1571 1292225 - 1292209 - R 89 -8 -5.02476 | opp_overlap 1292207 1292209 AGACTTGCTAAAAAA GAGAGG TCTCT CCTCTC TACTTTTCTATTGCT SSU05_1350 1293598 - 1292225 - | UDP-N-acetylmuramyl pentapeptide synthase TERM 1572 1292282 - 1292296 + g 72 -6.4 -4.29432 | opp_overlap 1292282, overlap 1292274 ATTAGAGCCTTTAAA GAGGAT TTG GTCCTC TTTTCCTAGACTTTC TERM 1573 1292498 - 1292515 + g 72 -7.7 -3.89956 | overlap 1292501 ATTGTGGAGATCGAC GGACTGG CTCC CCAGTTC TTTCATATCTGCTAA TERM 1574 1293101 - 1293127 + g 86 -6.6 -5.05601 | overlap 1293102 ATGAATATCTCCCAA GTGGTCTTGG CCCATTT CCAAGACCAG TTTTTCTGTATCATC TERM 1575 1293102 - 1293126 + g 80 -10.1 -3.62276 | overlap 1293101 TGAATATCTCCCAAG TGGTCTTGG CCCATTT CCAAGACCA GTTTTTCTGTATCAT TERM 1576 1293622 - 1293611 - R 91 -5.8 -5.46129 | opp_overlap 1293611 CAATAAACTAAAAAA GAGC TTTC GCTC TTTCTATTATACCAC SSU05_1351 1293951 - 1293715 - | hypothetical protein SSU05_1352 1295285 - 1294011 - | D-alanine-D-alanine ligase and related ATP-grasp enzymes recR 1295932 - 1295336 - | recombination protein RecR SSU05_1354 1298016 - 1295941 - | cell division protein FtsI/penicillin-binding protein 2 SSU05_1355 1298842 - 1298093 - | ABC transporter ATPase SSU05_1356 1299547 - 1299005 - | ABC transporter, ATP-binding protein TERM 1577 1299885 - 1299869 - R 84 -5.1 -5.4251 | overlap 1299880 1299882 TGGACACAGAAAAAA GCCATGC AAA ACATGAC CATTCCCTATGGGAA TERM 1578 1299908 - 1299880 - R 73 -6.7 -4.22948 | overlap 1299869 1299882 AAAAGCCATGCAAAA CATGACCATTCCC TAT GGGAAAAGTCACA CGAATAGTAAGCCCT TERM 1579 1299906 - 1299882 - R 81 -9.3 -3.70331 | overlap 1299869 1299880 AAGCCATGCAAAACA TGACCATTCCC TAT GGGAAAAGTCA CACGAATAGTAAGCC SSU05_1357 1300869 - 1300066 - | beta-lactamase superfamily hydrolase SSU05_1358 1302225 - 1300876 - | Signal transduction histidine kinase TERM 1580 1301047 - 1301062 + g 80 -10.4 -3.48924 | ACCTGTACCACCTTG GGCACG AGAT CGTGCC TTGTCTACGCGATAA TERM 1581 1301446 - 1301458 + g 71 -9.1 -3.31269 | opp_overlap 1301445 GAGATCTGTAATCAT CCGCA TCA TGCGG TTGGTCTCATCTAAG SSU05_1359 1302487 - 1302218 - | response regulator SSU05_1360 1302923 - 1302459 - | response regulator SSU05_1361 1303117 - 1303878 + | ABC-type polar amino acid transport system, ATPase component TERM 1582 1304691 - 1304679 - g 72 -7.7 -3.89524 | ATGGTAGCCTACAAA GCATC TAT GATGC CAATGGTCTCAAACC SSU05_1362 1303889 - 1304728 + | glutamine ABC transporter substrate-binding protein SSU05_1363 1304743 - 1305225 + | amino acid ABC transporter, permease protein SSU05_1364 1305117 - 1305440 + | amino acid (glutamine) ABC transporter permease protein SSU05_1365 1305455 - 1306114 + | ABC-type amino acid transport system, permease component TERM 1583 1306120 - 1306141 + T 100 -12.3 -4.8048 | opp_overlap 1306118 TATAGAATGAAATTT CTCCCAGCC AATC GGTTGGGAG TTTTTGCTGTCAAAA TERM 1584 1306176 - 1306159 - T 89 -7.7 -5.00616 | opp_overlap 1306159 TTTGCTGTCAAAAAA GAAGCCC TTTC GGACTTC TTGCTTTATTTATTC thrS 1308138 - 1306186 - | threonyl-tRNA synthetase TERM 1585 1307001 - 1306975 - G 72 -8 -3.86897 | opp_overlap 1306982 TTCAGGTGTCACAAA GATATGACCGTC GTT GAGGGTCATCTC ACGTACCCGTTGCAA SSU05_1367 1308475 - 1308152 - | hypothetical protein TERM 1586 1308521 - 1308494 - R 100 -12.8 -5.07652 | TCCTCCAAAAGAAAA TACGACGCCCTC GTAA AAGGACGTCGTA ACGTGGTTCCACCTT SSU05_1368 1309105 - 1308731 - | hypothetical protein SSU05_1369 1310433 - 1309120 - | glycosyltransferase SSU05_1370 1311432 - 1310434 - | glycosyltransferase TERM 1587 1312279 - 1312267 - g 91 -4.8 -5.60993 | CTTTCGATAAAAAAA GTCC TCGAG GGAC GTACCTTAAACACCG TERM 1588 1313407 - 1313387 - g 77 -8.3 -3.922 | overlap 1313375 AAACTGCTAAGCAAA TCTTACCAG TAA CTGGTGAGA AAGGAAGTTTATGGT SSU05_1371 1311679 - 1313484 + | ribonucleases G and E TERM 1589 1313597 - 1313640 + T 83 -6.1 -5.1471 | gap 1, opp_overlap 1313592 1313599 1313603, overlap 1313603 AGACTTAAAATCAAC CACAAAGCCCTCGCTAAGCT TATAC ATCT-AGCGAGGGCTTTATA TTTATTTTTTATAAT TERM 1590 1313638 - 1313599 - T 79 -10.9 -2.94735 | gap 1, opp_overlap 1313597 1313603, overlap 1313592 1313603 ACTTAAAATCAACCA CAAAGCCCTCGCTAAGCT TATAC ATCT-AGCGAGGGCTTTA TATTTATTTTTTATA TERM 1591 1313603 - 1313634 + T 91 -9.5 -4.56642 | gap 1, opp_overlap 1313603 1313599 1313592, overlap 1313597 AAAATCAACCACAAA GCCCTCGCTAAGCT TATAC ATCT-AGCGAGGGC TTTATATTTATTTTT TERM 1592 1313634 - 1313603 - T 85 -9.5 -4.12841 | gap 1, opp_overlap 1313597 1313603, overlap 1313599 1313592 AAAATCAACCACAAA GCCCTCGCTAAGCT TATAC ATCT-AGCGAGGGC TTTATATTTATTTTT SSU05_1372 1314763 - 1313918 - | transcriptional regulator SSU05_1373 1315133 - 1316218 + | Xaa-Pro aminopeptidase TERM 1593 1316223 - 1316250 + T 91 -11.4 -4.31835 | opp_overlap 1316223 1316225 1316226, overlap 1316226 TTGAAGGATAAAAAA TAGCCTCCTACA AATC TGTAGGAGGTTG TTTATTCTAGAAATT TERM 1594 1316250 - 1316223 - T 95 -7 -5.37345 | opp_overlap 1316223 1316226, overlap 1316225 1316226 TTGAAGGATAAAAAA TAGCCTCCTACA AATC TGTAGGAGGTTG TTTATTCTAGAAATT TERM 1595 1316248 - 1316225 - T 86 -9.6 -4.31563 | opp_overlap 1316223 1316226, overlap 1316223 1316226 GAAGGATAAAAAATA GCCTCCTACA AATC TGTAGGAGGT TGTTTATTCTAGAAA TERM 1596 1316247 - 1316226 - T 95 -13.1 -3.17311 | opp_overlap 1316223 1316226, overlap 1316225 1316223 AAGGATAAAAAATAG CCTCCTACA AATC TGTAGGAGG TTGTTTATTCTAGAA TERM 1597 1316226 - 1316247 + T 100 -13.1 -4.27512 | opp_overlap 1316226 1316225 1316223, overlap 1316223 AAGGATAAAAAATAG CCTCCTACA AATC TGTAGGAGG TTGTTTATTCTAGAA tgt 1317399 - 1316257 - | queuine tRNA-ribosyltransferase TERM 1598 1317344 - 1317355 + g 85 -5.8 -5.12172 | ATTTCGCCCAAACGT GCAC CTGT GTGC TTTTCTTTCTTAATC SSU05_1375 1317719 - 1318561 + | integral membrane protein TERM 1599 1318564 - 1318584 + T 100 -9.1 -4.98522 | opp_overlap 1318564 GAGTTACGTATAAAA TAAGAGCGA TAT TTGCTCTTA TTTTTATATACGCTT TERM 1600 1318584 - 1318564 - T 79 -6.9 -4.431 | opp_overlap 1318564 GAGTTACGTATAAAA TAAGAGCGA TAT TTGCTCTTA TTTTTATATACGCTT TERM 1601 1318793 - 1318817 + T 100 -13.7 -4.65895 | CCTTAGAGTCATCCG GCAGTTCAATG GTT CATTGAGCTGC TTTTTCGATGAAAAA TERM 1602 1318853 - 1318834 - T 100 -8.6 -5.14563 | opp_overlap 1318834 TTTTCGATGAAAAAA GTCGGATA AATA TACCCGAC TTATTAGTATTGTTC SSU05_1376 1319294 - 1318857 - | CoA-binding protein SSU05_1377 1320226 - 1319414 - | glucose-6-phosphate isomerase TERM 1603 1319921 - 1319941 + gr 87 -6.1 -5.22289 | AGCAACACCATTATT GGCCGCA TAAATCT TGTGGCC TTTTTGTGTTTCGTC SSU05_1378 1322819 - 1320183 - | DNA polymerase I TERM 1604 1321879 - 1321919 + gr 70 -8.4 -3.36452 | gap 1, opp_overlap 1321879, overlap 1321877 TCTTGTTTGAGCATA GCGGGGCT-GATTTCCG TTACGATT TGGAAATCGAGCACCGC TTCCTCTTGCGAGCT TERM 1605 1322905 - 1322877 - R 78 -9.7 -3.40052 | opp_overlap 1322882, overlap 1322882 AGAGCTGGAATAACA GAAAATCCCAGTC AGT GACTAGGATTTTT CTTTTCGATAATAAA TERM 1606 1322900 - 1322882 - R 100 -9.6 -4.79752 | opp_overlap 1322882, overlap 1322877 TGGAATAACAGAAAA TCCCAGTC AGT GACTAGGA TTTTTCTTTTCGATA TERM 1607 1322882 - 1322900 + r 100 -7.4 -5.48213 | opp_overlap 1322882 1322877 TGGAATAACAGAAAA TCCCAGTC AGT GACTAGGA TTTTTCTTTTCGATA SSU05_1379 1324220 - 1322895 - | hypothetical protein TERM 1608 1324237 - 1324271 + r 83 -9.5 -3.98204 | opp_overlap 1324246, overlap 1324238 1324246 TCTAGACTTGTGTTT ACAGAAAAATCCTAG ATGCA CTAGGATTTTTTTGC TTTATAGCTGTGTTT TERM 1609 1324238 - 1324270 + r 88 -13 -2.97838 | opp_overlap 1324246, overlap 1324237 1324246 CTAGACTTGTGTTTA CAGAAAAATCCTAG ATGCA CTAGGATTTTTTTG CTTTATAGCTGTGTT TERM 1610 1324262 - 1324246 - R 82 -6.6 -4.96848 | opp_overlap 1324238 1324237 1324246 GTGTTTACAGAAAAA TCCTAG ATGCA CTAGGA TTTTTTTGCTTTATA TERM 1611 1324246 - 1324262 + r 93 -6.6 -5.75822 | opp_overlap 1324246, overlap 1324238 1324237 GTGTTTACAGAAAAA TCCTAG ATGCA CTAGGA TTTTTTTGCTTTATA SSU05_1380 1327749 - 1324372 - | peptide ABC transporter permease SSU05_1381 1328450 - 1327749 - | peptide ABC transporter ATPase TERM 1612 1328527 - 1328512 - R 90 -9 -4.52047 | opp_overlap 1328512 1328509 1328514 TATTATAGCACAAAA GAGGGT TTTC ACCCTC TCCTTCATCTTTTAC SSU05_1382 1328875 - 1328609 - | superfamily I DNA/RNA helicase TERM 1613 1328961 - 1328942 - R 90 -7.1 -5.15634 | opp_overlap 1328942 TATTCCATCAAAAAA CGATGCC TGTTCC GGCACCG TTATATCTTTATTTA tpx 1329485 - 1328970 - | thiol peroxidase TERM 1614 1329527 - 1329508 - R 93 -6.5 -5.47218 | opp_overlap 1329508 GTTTATGTAAAAAAA TACCAGT TTTTTG ACTGGTA TTTTTGATATAGTTT TERM 1615 1329508 - 1329527 + r 83 -7.2 -4.85177 | opp_overlap 1329508 GTTTATGTAAAAAAA TACCAGTT TTTT GACTGGTA TTTTTGATATAGTTT SSU05_1384 1329677 - 1329495 - | cation transport ATPase SSU05_1385 1331440 - 1329674 - | cation transport ATPase TERM 1616 1331262 - 1331250 - GR 72 -7.7 -3.78529 | overlap 1331248 ACAATCATCAAAAGA CCTTG AAC CAAGG CTGCCCCTGTCCCAA SSU05_1386 1331952 - 1331398 - | cation transport ATPase TERM 1617 1332111 - 1332141 + r 80 -11.2 -3.15354 | opp_overlap 1332120 1332121, overlap 1332109 1332120 TTGACTTGATTTGAT GACTGAAAAGCTCC TGT GGAGGTTTTCAGCC TGTTCCCTTGAAATA TERM 1618 1332303 - 1332281 - R 100 -9.2 -5.31877 | opp_overlap 1332281 ATTGAGTATAAAAAA TAGATTGGAG AGA CCCCAACCTA TTTCTTACTAGCTCT SSU05_1387 1334126 - 1332321 - | amylase-binding protein B TERM 1619 1334071 - 1334061 - G 76 -6.8 -4.44667 | TTTCCCAATAATAAA GCCT GAC AGGC TTGAACAAGTTGAAC TERM 1620 1334322 - 1334304 - RH 90 -11 -4.27316 | opp_overlap 1334304 CTTTGTAACGCAAAA GCACCTGC CTT GCAAGTGC TTTCAAAAAAATATT TERM 1621 1334304 - 1334322 + rH 75 -8.8 -3.54307 | opp_overlap 1334304 CTTTGTAACGCAAAA GCACCTGC CTT GCAAGTGC TTTCAAAAAAATATT SSU05_1389 1335323 - 1334337 - | tellurite resistance protein TehB TERM 1622 1334999 - 1334969 - GH 72 -9.6 -2.67803 | overlap 1334965 CTGTCAGCAAAGTCA CCCGATGCCAAGCC TGT GGCTCGACAAAGGG AACATCATCTGTCGG SSU05_1388 1335291 - 1336409 + | threonine dehydrogenase and related Zn-dependent dehydrogenase TERM 1623 1336421 - 1336452 + Tr 83 -7.3 -4.75288 | opp_overlap 1336422 1336423, overlap 1336423 TTAAGATAAATAATA AGCCCCAGATAGT CTCGAA ACTGTCTGGGGTA TTTGTTTTCCTATAA TERM 1624 1336451 - 1336422 - TR 75 -7.1 -4.21393 | opp_overlap 1336421 1336423, overlap 1336423 TAAGATAAATAATAA GCCCCAGATAGTC TCGA AACTGTCTGGGGT ATTTGTTTTCCTATA TERM 1625 1336450 - 1336423 - TR 78 -10.6 -3.11209 | opp_overlap 1336421 1336423, overlap 1336422 AAGATAAATAATAAG CCCCAGATAGTC TCGA AACTGTCTGGGG TATTTGTTTTCCTAT TERM 1626 1336423 - 1336450 + Tr 93 -12.1 -3.98052 | opp_overlap 1336423 1336422, overlap 1336421 AAGATAAATAATAAG CCCCAGATAGT CTCGAA ACTGTCTGGGG TATTTGTTTTCCTAT TERM 1627 1336494 - 1336475 - TR 100 -7.8 -5.55769 | opp_overlap 1336475 TCCTATAACAAAAAA GACCGGGA TTTC TCCCAGCC TCTATCGACTATTGA smpB 1336963 - 1336496 - | SsrA-binding protein TERM 1628 1336880 - 1336921 + g 100 -7.9 -5.79595 | overlap 1336881 CCCCGTCAGGACCAT CCCCGCCTCCACTGTATCG ACAA TGGTATAGTCGTGGCGGGC TTTTTTATTTTGCGC TERM 1629 1336881 - 1336920 + g 100 -11.4 -4.0613 | overlap 1336880 CCCGTCAGGACCATC CCCGCCTCCACTGTATCG ACAA TGGTATAGTCGTGGCGGG CTTTTTTATTTTGCG SSU05_1391 1339335 - 1336966 - | exoribonuclease R TERM 1630 1337177 - 1337187 + g 73 -5.4 -4.59109 | GCAGTTCTCCGCTTG GCTT TCA AAGC TTTTTCGACAATATC secG 1340000 - 1339767 - | preprotein translocase subunit SecG SSU05_1393 1341029 - 1340196 - | major facilitator superfamily permease SSU05_1394 1341402 - 1341001 - | major facilitator superfamily permease TERM 1631 1341113 - 1341099 - GR 76 -2.8 -5.32565 | overlap 1341091 1341101 TAAGCAACCAAAAAA CATTTG GTA CAAAGG CCATACCACCCATAG SSU05_1395 1341991 - 1341389 - | dephospho-CoA kinase SSU05_1396 1342877 - 1341984 - | formamidopyrimidine-DNA glycosylase TERM 1632 1342070 - 1342086 + g 70 -8 -3.67141 | overlap 1342069 CTGTCTGGCAACGGG GACAGG CCTGC CCTGTC TTTCCGTAAACTTGT TERM 1633 1342127 - 1342137 + g 82 -6.8 -4.87665 | GCATAGTCCCATCCA TGCC CAA GGCA TTTTTGTAAGTCCGA TERM 1634 1343000 - 1342968 - R 79 -7 -4.42594 | gap 1, opp_overlap 1342968 1342968 1342996, overlap 1342970 CAAAGCAAATAGAAA CCTGACCGACGGTGC TTCG GCACC-TAGGTCACG GTTGTGATTTTCAAA TERM 1635 1343115 - 1343089 - R 75 -10.3 -2.57683 | gap 1, opp_overlap 1343085, overlap 1343088 AGATTTCTCCATAAC GCAGTAAAAGCC TTTC GGCTTTT-CTGC TAACTATTTCTAAGT TERM 1636 1343398 - 1343430 + r 95 -12.9 -3.64357 | opp_overlap 1343408, overlap 1343401 1343408 CTAGTTTCCAAGCTC GGGTTAAAAACGTCC CCC GGACGTTTTTAATAC TCTTTCTCATTATAA TERM 1637 1343401 - 1343427 + r 100 -15.4 -2.92326 | opp_overlap 1343408, overlap 1343398 1343408 GTTTCCAAGCTCGGG TTAAAAACGTCC CCC GGACGTTTTTAA TACTCTTTCTCATTA TERM 1638 1343408 - 1343420 + r 100 -9.1 -4.81734 | opp_overlap 1343408, overlap 1343401 1343398 AGCTCGGGTTAAAAA CGTCC CCC GGACG TTTTTAATACTCTTT TERM 1639 1343420 - 1343408 - R 90 -9.1 -4.56775 | opp_overlap 1343401 1343398 1343408 AGCTCGGGTTAAAAA CGTCC CCC GGACG TTTTTAATACTCTTT era 1344323 - 1343424 - | GTP-binding protein Era SSU05_1398 1344741 - 1344340 - | diacylglycerol kinase SSU05_1399 1345219 - 1344722 - | putative metalloprotease TERM 1640 1345630 - 1345619 - g 85 -4.4 -5.52986 | AGCCTAGCAAAAAAA GTCT TGGT AGAC TATGAGGAAATCCTA SSU05_1400 1345574 - 1346143 + | transcriptional regulator TERM 1641 1346223 - 1346188 - T 88 -5.6 -5.62288 | gap 1, opp_overlap 1346188 TTAATAAAACAAAAA GCATTCAAA-AATACCC GAT AGGTACAGTTTGAATGC TTTTAATTCGCTTAA SSU05_1401 1347755 - 1346247 - | phosphotransferase system IIC component, glucose/maltose/N-acetylglucosamine-specific SSU05_1402 1348484 - 1347783 - | N-acetylmannosamine-6-phosphate 2-epimerase TERM 1642 1348632 - 1348613 - R 91 -5.8 -5.59879 | overlap 1348615 TAGAAATACAAAAAA TCCTGAAA ATAG TTTCAGAA CGAGTTCTCATACCT TERM 1643 1348701 - 1348675 - R 100 -9.6 -4.91977 | opp_overlap 1348675 TAGGAAAATATAAAA GATTCTACCCAA AAT TTGAATAGAATC CTTATTTTAATACCA SSU05_1403 1350288 - 1348795 - | hemolysin TERM 1644 1350626 - 1350645 + r 82 -12.2 -2.53263 | opp_overlap 1350629 1350631 1350632, overlap 1350629 AGCTGCAGGTTGCTA GAACAGCC TAGA GGCTGTTC TAGGTTGGAAATAAG TERM 1645 1350642 - 1350629 - R 70 -8.1 -3.29511 | opp_overlap 1350626 1350629, overlap 1350631 1350632 TGCAGGTTGCTAGAA CAGCC TAGA GGCTG TTCTAGGTTGGAAAT TERM 1646 1350629 - 1350642 + r 70 -8.1 -3.42056 | opp_overlap 1350629 1350631 1350632, overlap 1350626 TGCAGGTTGCTAGAA CAGCC TAGA GGCTG TTCTAGGTTGGAAAT TERM 1647 1350863 - 1350819 - R 100 -8.7 -5.0916 | opp_overlap 1350819 TTTTGAACACAAAAA CTCCCCCGACTAGCTTCTAAT CCT ATTAAAAACTTGTTAGGAGAG TTATTCCATTTTATT SSU05_1404 1351588 - 1350878 - | hypothetical protein TERM 1648 1351627 - 1351609 - R 74 -3.9 -5.2422 | gap 1, opp_overlap 1351609, overlap 1351601 AATTATAGCAAAAAA TTCC-AGC AAAA GCTTGGAA TTTTTAACTGCTTAT SSU05_1405 1353381 - 1351642 - | putative ABC transporter SSU05_1406 1355108 - 1353381 - | ABC-type multidrug transport system, ATPase and permease component TERM 1649 1355234 - 1355205 - R 86 -5.7 -5.27923 | gap 1 TAAGCGCACAAAAAA GCCCAGG-GAAGCA TCT CACTCCACCTAGGC TTGCGTAAGTCCACA SSU05_1407 1355557 - 1355360 - | hypothetical protein TERM 1650 1355559 - 1355545 - G 100 -8.6 -5.80727 | opp_overlap 1355544 AAAAATAAGAAAAAA CCTTGT CAA ACAAGG CCTTTCGATAGTATT SSU05_1408 1355768 - 1356277 + | Fe2+ transport system protein A TERM 1651 1356730 - 1356714 - g 85 -5.8 -5.15634 | CAGTGCACTAAAAAA GCTAGG TATAT CCCAGC TCCTCCATGAAGTAG TERM 1652 1357711 - 1357695 - g 81 -5.1 -5.16237 | overlap 1357697 1357701 AATGGCACTAAAAAA GACCAAG CAA CTTGGTG GAGTCGCAAGCCCCT TERM 1653 1357709 - 1357697 - g 76 -7.7 -4.20707 | overlap 1357695 1357701 TGGCACTAAAAAAGA CCAAG CAA CTTGG TGGAGTCGCAAGCCC SSU05_1409 1356274 - 1358418 + | Fe2+ transport system protein B TERM 1654 1358577 - 1358601 + T 71 -5 -4.71061 | gap 1, opp_overlap 1358577 CATCCATAACAAAAA GGTCTGCCTCA TTAT TGTG-CAGACC TTTTTACATGTAGCT TERM 1655 1358601 - 1358577 - T 79 -5 -5.20333 | gap 1, opp_overlap 1358577 CATCCATAACAAAAA GGTCTGCCTCA TTAT TGTG-CAGACC TTTTTACATGTAGCT SSU05_1410 1359582 - 1358623 - | cell division protein SSU05_1411 1360291 - 1359545 - | ATPase involved in cell division TERM 1656 1360192 - 1360214 + gr 72 -7.8 -3.68911 | overlap 1360209 GAAGGGCAGTCGTTC CGTTTCCA TATTTCT TGGAAACG TCTTTCATTTCTATT SSU05_1412 1361357 - 1360380 - | peptide chain release factor 2 TERM 1657 1361211 - 1361233 + g 70 -7.8 -3.68244 | opp_overlap 1361205 CCGCACAGACTCATC TTCTGCTAGA AAA TCTAGCAAAA TTTCAGATTCATCAT SSU05_1413 1361496 - 1361401 - | hypothetical protein SSU05_1414 1362646 - 1361510 - | hypothetical protein SSU05_1415 1363190 - 1362678 - | glycopeptide antibiotics resistance protein TERM 1658 1363242 - 1363227 - R 82 -7.6 -4.36914 | TGCTGTTCTATAAAA TGTCAC TTCT GTGACA AAGCTCGTTCCATAT TERM 1659 1363304 - 1363292 - R 70 -3.3 -5.00027 | ACTAAAAACAGAAAA GGAAG ACA CTACC AAGCCTCCCCTTATT SSU05_1416 1363752 - 1363336 - | hypothetical protein SSU05_1417 1364188 - 1364379 + | hypothetical protein TERM 1660 1364387 - 1364366 - T 95 -7.3 -5.39721 | opp_overlap 1364366 TCAGTACAGAAAAAA GCTCAGACC ACTA AATCTGAGC TTTTTCAAATGATAT TERM 1661 1364366 - 1364387 + T 76 -5.9 -4.63928 | opp_overlap 1364366 TCAGTACAGAAAAAA GCTCAGA CCACTAAA TCTGAGC TTTTTCAAATGATAT SSU05_1418 1366402 - 1364495 - | cation transport ATPase TERM 1662 1366029 - 1366039 + gT 73 -5.4 -4.614 | CCAATCAATTTACCA GTTG GGT CAAC TTTTGTATCGTTGGC SSU05_1419 1367121 - 1366336 - | cation transport ATPase SSU05_1420 1367221 - 1367093 - | hypothetical protein TERM 1663 1367256 - 1367230 - H 100 -13.2 -5.80003 | opp_overlap 1367201 1367200 1367229 1367228 CTAACAAATAAAAAA GAGACCTGTTTT ATT AAAACAAGTCTC GCTATTTAATATATT TERM 1664 1367808 - 1367780 - g 73 -5.3 -4.68593 | overlap 1367805 TCTACTACGCAAAAA GAGCTCAGCTTGA TTA TGAAGTTAAGCTC TCAGATTCGAGAACA SSU05_1421 1367509 - 1368672 + | hypothetical protein TERM 1665 1368839 - 1368877 + F 73 -9 -3.43437 | opp_overlap 1368831 1368845, overlap 1368845 1368850 ATCAACATTTTTAGT CAAAAACAGAACTTAGTC TGA GACTAAATTCTGTTGATG TTATGCAGTTTTCTC TERM 1666 1368845 - 1368871 + F 82 -11 -3.42013 | opp_overlap 1368845, overlap 1368839 1368850 ATTTTTAGTCAAAAA CAGAACTTAGTC TGA GACTAAATTCTG TTGATGTTATGCAGT TERM 1667 1368871 - 1368845 - f 100 -13.2 -4.66163 | opp_overlap 1368839 1368845 1368850 ATTTTTAGTCAAAAA CAGAACTTAGTC TGA GACTAAATTCTG TTGATGTTATGCAGT TERM 1668 1369002 - 1368984 - f 100 -11.8 -5.76633 | opp_overlap 1368984 1368987 TCACAGACAAAAAAA GAACGACT ATC AGTCGTTC TTCAATAACATACGG TERM 1669 1368984 - 1369002 + F 83 -11.8 -3.06796 | opp_overlap 1368984, overlap 1368987 TCACAGACAAAAAAA GAACGACT ATC AGTCGTTC TTCAATAACATACGG TERM 1670 1368987 - 1368999 + F 72 -7.7 -3.68073 | opp_overlap 1368984, overlap 1368984 CAGACAAAAAAAGAA CGACT ATC AGTCG TTCTTCAATAACATA SSU05_1422 1369568 - 1370161 + | hypothetical protein TERM 1671 1370194 - 1370164 - f 79 -6.9 -4.4648 | gap 1, opp_overlap 1370169 1370170, overlap 1370170 ATTGTTAGGATAAAA TCATAACCACCCGT GAAA ACGGGTGGCT-TGT ACACCGGCTATAAGC TERM 1672 1370169 - 1370190 + F 78 -10.1 -3.29263 | opp_overlap 1370164 1370170, overlap 1370170 TAGGATAAAATCATA ACCACCCGT GAAA ACGGGTGGC TTGTACACCGGCTAT TERM 1673 1370170 - 1370189 + F 91 -13.6 -2.57344 | opp_overlap 1370170 1370164, overlap 1370169 AGGATAAAATCATAA CCACCCGT GAAA ACGGGTGG CTTGTACACCGGCTA TERM 1674 1370189 - 1370170 - f 100 -13.6 -3.73008 | opp_overlap 1370169 1370170, overlap 1370164 AGGATAAAATCATAA CCACCCGT GAAA ACGGGTGG CTTGTACACCGGCTA TERM 1675 1370199 - 1370211 + F 81 -9.1 -4.03234 | GGGTGGCTTGTACAC CGGCT ATA AGCCG TTTCTCTCCAGCGAC TERM 1676 1370298 - 1370283 - f 75 -10.4 -2.50291 | opp_overlap 1370283, overlap 1370282 AATTACTTGACTAAT GCCCGT AACA ACGGGC TTTTATCTTGTTCTA TERM 1677 1370283 - 1370298 + F 100 -10.4 -4.82162 | opp_overlap 1370283 1370282 AATTACTTGACTAAT GCCCGT AACA ACGGGC TTTTATCTTGTTCTA TERM 1678 1370664 - 1370650 - f 85 -2.8 -5.84381 | overlap 1370642 GCATGAAGAAAAAAA CGTTTT CAG AAAGCG AAAATCATAACCAAA TERM 1679 1371072 - 1371057 - g 73 -5.4 -4.65895 | overlap 1371061 CCGTTGACGGAAAAA CGATTC GGGG GAACCG AGGGAAACACCAATC SSU05_1423 1370834 - 1371247 + | transposase SSU05_1424 1371263 - 1371643 + | transposase SSU05_1425 1371644 - 1371850 + | transposase TERM 1680 1372164 - 1372198 + F 100 -10.6 -4.96848 | opp_overlap 1372163, overlap 1372171 ATGGAAACTCAAAGC CTTGGCAGCCACCAGC ATA GCTGGTGGCTTTCTTG TTTTTCTCTACGAGA TERM 1681 1372171 - 1372191 + G 100 -16.9 -4.80417 | opp_overlap 1372163, overlap 1372164 CTCAAAGCCTTGGCA GCCACCAGC ATA GCTGGTGGC TTTCTTGTTTTTCTC TERM 1682 1372232 - 1372218 - g 71 -4.2 -4.91109 | overlap 1372219 TCTCTACGAGAAAAA CTGGCT CGA AGCCAT AATAAAAAAACGGCT TERM 1683 1372264 - 1372243 - g 91 -3.7 -5.88565 | opp_overlap 1372257, overlap 1372244 GCCATAATAAAAAAA CGGCTTCAA ACGT TCGAAACCA TTTTGTTTTTTTATT TERM 1684 1372257 - 1372269 + G 93 -2.7 -6.01187 | opp_overlap 1372244 1372243 ACGGCTTCAAACGTT CGAAA CCA TTTTG TTTTTTTATTTAATT SSU05_1426 1372165 - 1372305 + | hypothetical protein SSU05_1427 1372619 - 1372275 - | metal-sulfur cluster biosynthetic protein TERM 1685 1372658 - 1372638 - R 81 -6.9 -4.55023 | overlap 1372642 1372651 TTCAATACTAGAAAA GAAACAAAC GAA GTTTGTGTC AAAAAGTCCACTGGA TERM 1686 1372654 - 1372642 - R 78 -6.3 -4.81357 | overlap 1372638 1372651 ATACTAGAAAAGAAA CAAAC GAA GTTTG TGTCAAAAAGTCCAC TERM 1687 1372674 - 1372664 - R 78 -6.8 -4.56775 | opp_overlap 1372671 AGTTTGTGTCAAAAA GTCC ACT GGAC GTTACGCTCCCTTTC SSU05_1428 1373885 - 1372767 - | RNA polymerase sigma factor RpoD TERM 1688 1373843 - 1373860 + g 93 -2.7 -5.9667 | CGGCAACTTGTACAT CAAAAGT AGTT ACTTCTG TTTTTTTATCTTTTT dnaG 1375678 - 1373888 - | DNA primase SSU05_1430 1375920 - 1376225 + | large-conductance mechanosensitive channel TERM 1689 1376240 - 1376226 - T 76 -5.8 -4.64763 | opp_overlap 1376239 TTATTGAAAAAATAA TCAATA ATA TATTGA AAAACAGGTCTCCAT TERM 1690 1376260 - 1376245 - T 74 -4.7 -4.74453 | opp_overlap 1376239 1376245 TAATATATTGAAAAA CAGGT CTCCAT ACCTG TTTTGCTCTTCCATA TERM 1691 1376313 - 1376286 - T 70 -3.4 -5.01535 | opp_overlap 1376289, overlap 1376287 1376289 CCATAATTACAAAAA TTAGATGTGAGC CTCC ACTCACATCTTT TCTTATCCTTCGTAT TERM 1692 1376289 - 1376310 + T 100 -8.8 -4.84492 | opp_overlap 1376289 1376287 1376286 TAATTACAAAAATTA GATGTGAG CCTCCA CTCACATC TTTTCTTATCCTTCG TERM 1693 1376310 - 1376289 - T 76 -9.5 -3.35709 | opp_overlap 1376289, overlap 1376287 1376286 TAATTACAAAAATTA GATGTGAGC CTCC ACTCACATC TTTTCTTATCCTTCG SSU05_1431 1376639 - 1376316 - | UDP-glucose 4-epimerase SSU05_1432 1377343 - 1376636 - | UDP-glucose 4-epimerase TERM 1694 1377134 - 1377124 - G 73 -5.4 -4.59773 | overlap 1377126 TTTCATTTTCAAAAA CTTG GCG CAAG GCTTCCTTATCTGCC TERM 1695 1377415 - 1377402 - R 91 -5.9 -5.74086 | opp_overlap 1377402 AAAGTAAACAAAAAA CAGCC TTTC GGCCG TTTTCAAATTCAATT SSU05_1433 1377680 - 1377429 - | 30S ribosomal protein S21 SSU05_1434 1378348 - 1377704 - | hypothetical protein TERM 1696 1378261 - 1378249 - GR 74 -7.7 -3.92522 | TCTCAAGCGGATAAA CTAGC CAA GCTAG GTAGATGGTTCCTAG SSU05_1435 1378460 - 1378323 - | HAD family sugar phosphatase SSU05_1436 1379097 - 1378447 - | HAD family sugar phosphatase SSU05_1437 1379724 - 1379107 - | ADP-ribose pyrophosphatase SSU05_1438 1380034 - 1379711 - | Acyl-ACP thioesterase SSU05_1439 1380291 - 1379953 - | Acyl-ACP thioesterase SSU05_1440 1380452 - 1380288 - | Acyl-ACP thioesterase TERM 1697 1380653 - 1380641 - R 76 -7.7 -4.14764 | opp_overlap 1380637, overlap 1380637 1380636 1380646 TTGGAAATAAGGAAA CGAAG TTT CTTCG CTCGTCGAAGTAATA SSU05_1441 1381812 - 1380685 - | coproporphyrinogen III oxidase SSU05_1442 1382267 - 1382503 + | hypothetical protein TERM 1698 1382516 - 1382501 - T 88 -5.4 -5.48787 | opp_overlap 1382501 1382495 AGAATACAGAAAAAA TGACCC CGCA AGGTCA TTTTTAGTTTATTTA TERM 1699 1382501 - 1382516 + T 79 -4.7 -5.13137 | opp_overlap 1382501, overlap 1382495 AGAATACAGAAAAAA TGACC CCGCAA GGTCA TTTTTAGTTTATTTA SSU05_1443 1383102 - 1382638 - | maltodextrin phosphorylase SSU05_1444 1384900 - 1383104 - | maltodextrin phosphorylase SSU05_1445 1385788 - 1385075 - | purine-nucleoside phosphorylase SSU05_1446 1386629 - 1385886 - | purine nucleoside phosphorylase TERM 1700 1386565 - 1386578 + g 78 -5.3 -5.06414 | opp_overlap 1386565 ATCAAACCGAATTCA GGTTT TACC AAACC TTTTTCTTCCAAGAA SSU05_1447 1386997 - 1386641 - | arsenate reductase SSU05_1448 1388208 - 1386997 - | phosphopentomutase TERM 1701 1388493 - 1388535 + r 80 -6.4 -4.8743 | opp_overlap 1388494 1388500, overlap 1388494 1388500 TGTTTTCATTATACC ATAAAAACGCCTCTCATTGT ACC AAAATGAGAAGCGTTTTCAA TTTATTTCTTTTCGA TERM 1702 1388534 - 1388494 - R 95 -14.3 -2.66316 | opp_overlap 1388494 1388493 1388500, overlap 1388500 GTTTTCATTATACCA TAAAAACGCCTCTCATTGT ACC AAAATGAGAAGCGTTTTCA ATTTATTTCTTTTCG TERM 1703 1388494 - 1388534 + r 80 -9.9 -3.50831 | opp_overlap 1388494 1388500, overlap 1388493 1388500 GTTTTCATTATACCA TAAAAACGCCTCTCATTGT ACC AAAATGAGAAGCGTTTTCA ATTTATTTCTTTTCG TERM 1704 1388528 - 1388500 - R 100 -11.1 -4.95758 | opp_overlap 1388500 1388494 1388493, overlap 1388494 ATTATACCATAAAAA CGCCTCTCATTGT ACC AAAATGAGAAGCG TTTTCAATTTATTTC TERM 1705 1388500 - 1388528 + r 90 -8.9 -4.45261 | opp_overlap 1388494 1388500, overlap 1388494 1388493 ATTATACCATAAAAA CGCCTCTCATTGT ACC AAAATGAGAAGCG TTTTCAATTTATTTC SSU05_1449 1389211 - 1388537 - | ribose-5-phosphate isomerase A TERM 1706 1388705 - 1388719 + g 95 -7.2 -5.53288 | AATGATAAAGTTCTG CATATC CGT GATATG TTTTTTTCCATTACG TERM 1707 1388985 - 1389002 + g 73 -3.5 -5.0133 | gap 1, opp_overlap 1388987, overlap 1388988 ACCGTCAAGTCCACA TATTCGAC TTC GTCGA-TA TTTTTTAGGGGAATC TERM 1708 1388988 - 1389000 + g 76 -7.7 -4.13561 | opp_overlap 1388987, overlap 1388985 GTCAAGTCCACATAT TCGAC TTC GTCGA TATTTTTTAGGGGAA SSU05_1450 1389412 - 1390740 + | Type I restriction enzyme EcoKI specificity protein (S protein) SSU05_1451 1392262 - 1390694 - | type I restriction-modification system, S subunit TERM 1709 1391137 - 1391151 + g 77 -6.4 -4.66953 | overlap 1391143 CCCAATAATTCGGCT CACTTC TTG GAGGTG TTTTTCCAATATTAA SSU05_1452 1393725 - 1392262 - | EcoE type I restriction modification enzyme M subunit SSU05_1453 1396062 - 1393738 - | EcoA type I restriction-modification enzyme R subunit TERM 1710 1394484 - 1394474 - G 71 -6.8 -4.08706 | TTTTCAGGATATAAA CGTG TTC CACG ACCAATAATCTGTTT TERM 1711 1394793 - 1394817 + g 73 -7.3 -4.12942 | CAAAGCGTGCATTAT TTTGTTTCATA TAA TCTGAAACAAA TTTTGCAACCTTTCG trmE 1396283 - 1397656 + | tRNA modification GTPase TrmE TERM 1712 1397665 - 1397688 + F 95 -10.4 -4.68132 | opp_overlap 1397665 AAAATAAGAACAAAA GTCATGTAAG AAAA CTTGCATGAC TTTATTTGTATATTA TERM 1713 1397688 - 1397665 - f 95 -8.2 -5.06116 | opp_overlap 1397665 AAAATAAGAACAAAA GTCATGTAAG AAAA CTTGCATGAC TTTATTTGTATATTA TERM 1714 1397870 - 1397880 + G 71 -3.2 -4.95957 | ACGATCACATTAACG TCGG AAG CTGA TTTTTACTTGATTTA SSU05_1455 1397750 - 1398844 + | hypothetical protein TERM 1715 1398872 - 1398911 + T 78 -10.2 -3.3247 | opp_overlap 1398872 1398879, overlap 1398879 AATCTCAATAAAGAT TGTAAAAGTCCCAAGA TGACTCTT TCTTGGGACTTTCGCA TATTCTATCGAAGTT TERM 1716 1398911 - 1398872 - T 75 -10.2 -2.8136 | opp_overlap 1398872 1398879, overlap 1398879 AATCTCAATAAAGAT TGTAAAAGTCCCAAGA TGACTCTT TCTTGGGACTTTCGCA TATTCTATCGAAGTT TERM 1717 1398904 - 1398879 - T 83 -9.1 -4.2243 | opp_overlap 1398872 1398879, overlap 1398872 ATAAAGATTGTAAAA GTCCCAAGA TGACTCTT TCTTGGGAC TTTCGCATATTCTAT TERM 1718 1398879 - 1398904 + T 78 -9.1 -3.68662 | opp_overlap 1398879 1398872, overlap 1398872 ATAAAGATTGTAAAA GTCCCAAGA TGACTCTT TCTTGGGAC TTTCGCATATTCTAT SSU05_1456 1400826 - 1399357 - | hypothetical protein SSU05_1457 1401113 - 1400838 - | hypothetical protein SSU05_1458 1401418 - 1401248 - | hypothetical protein SSU05_1459 1402291 - 1401491 - | beta-propeller domain-containing protein SSU05_1460 1402917 - 1402339 - | Uracil-DNA glycosylase SSU05_1461 1403362 - 1402904 - | acetyltransferase TERM 1719 1403379 - 1403394 + r 80 -10.4 -3.40022 | opp_overlap 1403379 TTTCCTCCTAAAAAA GACGGG CGTA CCCGTC TTCATGTATTACTTA TERM 1720 1403394 - 1403379 - R 100 -10.4 -5.00616 | opp_overlap 1403379 TTTCCTCCTAAAAAA GACGGG CGTA CCCGTC TTCATGTATTACTTA SSU05_1462 1404803 - 1403403 - | dipeptidase PepV TERM 1721 1403711 - 1403739 + g 85 -6 -5.08824 | opp_overlap 1403713, overlap 1403713 CGCCCAGTTTTTCCA AACCAGCCTTGA TGGTT TCAGGGTTGGTA TTTTTTGGATAACGG TERM 1722 1403713 - 1403737 + g 79 -8.6 -4.17608 | opp_overlap 1403713, overlap 1403711 CCCAGTTTTTCCAAA CCAGCCTTGA TGGTT TCAGGGTTGG TATTTTTTGGATAAC TERM 1723 1403835 - 1403858 + g 78 -5.2 -5.06451 | AAGAGCTCCCATTTG CTCATCGTAG ATGG CTACGCCGAG TTTTTTAGCGTCATG TERM 1724 1404339 - 1404374 + g 73 -3.8 -5.03314 | overlap 1404341 ATCCATGTCCGCCCA GCCTGACTCTTCGTCG GTAC CGACGATGAAGCGGAC TTTTTTAGAGGTCGA TERM 1725 1404883 - 1404896 + r 70 -6.7 -4.15029 | opp_overlap 1404883 AAGCGAAGAACACAA GTTGG TCTC CCAAC TTCTTTCTATAAAAT SSU05_1463 1406112 - 1405030 - | serine/threonine:Na+ symporter TERM 1726 1406461 - 1406436 - R 95 -10.5 -4.42238 | opp_overlap 1406436 GGATTGCAATGAAAA GCCCTGCCTTA TCAG TAAAGCAGGAC TTGATCGGTTCAAGA SSU05_1464 1406850 - 1406545 - | hypothetical protein SSU05_1465 1407021 - 1406890 - | hypothetical protein SSU05_1466 1408217 - 1407441 - | SAM-dependent methyltransferase TERM 1727 1408340 - 1408325 - R 86 -5.4 -5.30448 | opp_overlap 1408325 AAAGAAAGAGAAAAA GCTACC TATC GATAGC TTTTAGTCTACGTCA SSU05_1467 1409892 - 1408348 - | hypothetical protein TERM 1728 1408928 - 1408946 + g 71 -6.6 -4.14243 | opp_overlap 1408927 1408928, overlap 1408929 GTCTGGAAGATAAAG CGGCTTGG CGT CCGAGCCA TTTTGAAATCAAATG TERM 1729 1408929 - 1408945 + g 74 -10.1 -3.08224 | opp_overlap 1408928 1408927, overlap 1408928 TCTGGAAGATAAAGC GGCTTGG CGT CCGAGCC ATTTTGAAATCAAAT TERM 1730 1409916 - 1409935 + r 93 -7.9 -5.17786 | opp_overlap 1409916 CACAACATCAAAGAA CTGGAGT AACCAA ACTCCAG TTTTTACTTTTATTC TERM 1731 1409935 - 1409916 - R 76 -7.9 -4.10459 | opp_overlap 1409916 CACAACATCAAAGAA CTGGAGT AACCAA ACTCCAG TTTTTACTTTTATTC SSU05_1468 1411411 - 1410056 - | phosphomannomutase SSU05_1469 1412131 - 1411418 - | hypothetical protein SSU05_1470 1412966 - 1412115 - | hypothetical protein TERM 1732 1413469 - 1413453 - g 100 -8 -5.74684 | opp_overlap 1413453 CAAGAAAAATAAAAA CGGCAA GAAGA TTGCCG TCTTGGAGATTGACG SSU05_1471 1413148 - 1414491 + | UDP-N-acetylmuramyl tripeptide synthase TERM 1733 1414808 - 1414761 - g 82 -2.1 -5.64274 | opp_overlap 1414766, overlap 1414763 1414765 TTACCGACAAAAAAA GACAGCCTAGCA-GACTTTATCG AAAA CGATGGCGTCATGCTA-GCTATC TGCGGTGGCTTCCAG SSU05_1472 1414491 - 1415279 + | glutamine amidotransferase TERM 1734 1415421 - 1415379 - T 93 -12.2 -4.01853 | opp_overlap 1415379 1415384 1415389, overlap 1415389 GAAGAGTATGAGAAA TAAAGCAAAACCGCTTCTGA TAT CCAGAGGCGGTTTTATTTTA TATACTTCCAATCAA TERM 1735 1415379 - 1415421 + T 100 -13.7 -2.91274 | opp_overlap 1415379 1415389, overlap 1415384 1415389 GAAGAGTATGAGAAA TAAAGCAAAACCGCTTCTG ATATC CAGAGGCGGTTTTATTTTA TATACTTCCAATCAA TERM 1736 1415384 - 1415416 + T 95 -11.4 -4.614 | opp_overlap 1415379 1415389, overlap 1415379 1415389 GTATGAGAAATAAAG CAAAACCGCTTCTG ATATC CAGAGGCGGTTTTA TTTTATATACTTCCA TERM 1737 1415411 - 1415389 - T 100 -9.8 -4.74219 | opp_overlap 1415384 1415379 1415389, overlap 1415379 AGAAATAAAGCAAAA CCGCTTCTGA TAT CCAGAGGCGG TTTTATTTTATATAC TERM 1738 1415389 - 1415411 + T 100 -11.3 -5.23292 | opp_overlap 1415389 1415379, overlap 1415384 1415379 AGAAATAAAGCAAAA CCGCTTCTG ATATC CAGAGGCGG TTTTATTTTATATAC SSU05_1473 1416246 - 1415419 - | SAM-dependent methyltransferase TERM 1739 1416204 - 1416182 - G 100 -15.6 -3.25341 | overlap 1416180 AGGTCAAGACCAAGA GCCTGCCCAC AAT GTGGACAGGC GAAAAATTGGTCGCT SSU05_1474 1416784 - 1416248 - | hypothetical protein TERM 1740 1416906 - 1416892 - R 86 -10 -4.15788 | AAGGTTGGGAATAAA GCGAAC AAA GTTCGC AACATTCGTTAGGCC SSU05_1475 1417115 - 1417020 - | hypothetical protein SSU05_1476 1419153 - 1417162 - | ABC transporter ATPase TERM 1741 1419143 - 1419124 - G 85 -5.7 -5.15634 | opp_overlap 1419124 GATTTCAGCAAAAAA CAGCGAC TTTACC GTCACTG TCCTTCTCAAAAAAT SSU05_1477 1419568 - 1419161 - | hypothetical protein SSU05_1478 1420196 - 1419537 - | Zn-dependent protease SSU05_1479 1421038 - 1420262 - | esterase TERM 1742 1420880 - 1420892 + g 78 -9.1 -3.74693 | TGTAGACCGATTGAG CCAGG AAT CCTGG TTTCCTCCCATACCG SSU05_1480 1422815 - 1421103 - | metallo-beta-lactamase superfamily hydrolase TERM 1743 1421433 - 1421411 - G 72 -9.2 -3.15544 | opp_overlap 1421429 TCTTACGGTCACGAA GGACGATATT TCC AACATCGCCC ATGGCATTTCCGTCA TERM 1744 1422777 - 1422797 + g 100 -7.6 -5.42605 | CATCTTTACTCCTTT TGGACATC CCACA GGTGTCCA TTTTATTTTTCTTAC TERM 1745 1422896 - 1422910 + r 81 -8.6 -4.11304 | opp_overlap 1422896 TACTTCGACGTAAGA GGAAAC TCC GTTTCC TTATTTCTAACTTCA TERM 1746 1422910 - 1422896 - R 70 -8.6 -3.08996 | opp_overlap 1422896 TACTTCGACGTAAGA GGAAAC TCC GTTTCC TTATTTCTAACTTCA TERM 1747 1423140 - 1423120 - R 100 -8.3 -5.35222 | opp_overlap 1423120 AAAATTTACAAAAAA CTCCGCTGA AAA TCAACGAAG TTCTACATATACATT SSU05_1481 1423558 - 1423154 - | hypothetical protein SSU05_1482 1423938 - 1423564 - | hypothetical protein SSU05_1483 1424051 - 1423926 - | hypothetical protein TERM 1748 1424137 - 1424120 - R 88 -7.7 -4.86902 | opp_overlap 1424120 CAAAGGATAATAAAA GCCTGGA TTAC TCCAGAC TTTAGACCTGTATTC SSU05_1484 1424812 - 1424234 - | ABC-type uncharacterized transport system, ATPase component SSU05_1485 1424991 - 1424809 - | ABC-type uncharacterized transport system, ATPase component TERM 1749 1424947 - 1424965 + g 100 -9.6 -5.26875 | TTCATCAAAACCGTT TGTCACCA CCT TGGTGGCA TTTTTTAATTCAACA SSU05_1486 1425854 - 1424988 - | ABC-type uncharacterized transport system, permease component SSU05_1487 1426911 - 1425877 - | ABC-type uncharacterized transport system, periplasmic component TERM 1750 1427121 - 1427091 - RH 100 -13.3 -4.35874 | GAAGACAATGGAAAA GCCCCCGCAGG AAAAAACAA CCTGCGAGGGC GTCAATGACACGGTG SSU05_1489 1429055 - 1427631 - | Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase SSU05_1488 1428656 - 1428820 + | hypothetical protein SSU05_1490 1430911 - 1429070 - | phosphotransferase system IIC component, glucose/maltose/N-acetylglucosamine-specific TERM 1751 1429382 - 1429369 - G 76 -6.7 -4.56597 | GTTTTGTTGGAAAAA GACTG GTAA CAGTC CCGTCAAATGGAGCA SSU05_1491 1431830 - 1430922 - | transcriptional antiterminator TERM 1752 1431842 - 1431789 - G 100 -9.3 -5.14698 | gap 1 AAACTTAAAATAAAA GAACCTACTTAAAAGAAATCGACA TATATCG TATCGAT-TCATTTAAATAGGTTC CTGCTCGCCTTAAAG TERM 1753 1431994 - 1431976 - H 70 -3.2 -4.94222 | overlap 1431967 AATAATTTATAAAAA TATAAGAA TAC TTCTTTTA GTCCCCTTCGTTAAA TERM 1754 1432656 - 1432608 - g 76 -10.5 -2.97475 | opp_overlap 1432607, overlap 1432607 TGTCTGACGAGAAAT TGTTTGAAATCTTATCGACTCAG GAA CTGAGTCCAAAAAATCTCCAACA GGTCTTTCAAGGTTT SSU05_1492 1432067 - 1433725 + | fibronectin/fibrinogen binding protein TERM 1755 1433738 - 1433706 - T 78 -6.5 -4.7033 | opp_overlap 1433711, overlap 1433711 CAACTGAAGATAAAA TAAAATCCATGAA AATCTAG TTCATGGATTTTT CTGTATTGAAGCCTA TERM 1756 1433733 - 1433711 - T 91 -6.4 -5.26907 | opp_overlap 1433711, overlap 1433706 GAAGATAAAATAAAA TCCATGAA AATCTAG TTCATGGA TTTTTCTGTATTGAA TERM 1757 1433711 - 1433733 + T 86 -6.4 -5.10064 | opp_overlap 1433711 1433706 GAAGATAAAATAAAA TCCATGAA AATCTAG TTCATGGA TTTTTCTGTATTGAA SSU05_1493 1434467 - 1433751 - | Alpha-acetolactate decarboxylase SSU05_1494 1434629 - 1434471 - | TPR repeat-containing protein SSU05_1495 1435699 - 1434665 - | TPR repeat-containing protein TERM 1758 1435659 - 1435680 + g 80 -4.5 -5.17054 | GCCTTGTCTAAATCC TGTTGGT CCAAACAA ACCAACA TTTTTTCACTATTGT SSU05_1496 1436864 - 1435689 - | permease TERM 1759 1437527 - 1437511 - g 80 -8.7 -3.92324 | AAAGTAGAGAAAATA GCAACCT ATC AGGCTGC GCCAGGAAGTGGTCC SSU05_1497 1436890 - 1437996 + | 3-carboxymuconate cyclase SSU05_1498 1438009 - 1438245 + | hypothetical protein TERM 1760 1438281 - 1438258 - T 75 -5.3 -4.74453 | opp_overlap 1438258 TAATACATGTAAAAA CTAGGCTGA GAATGT TCAGTCTAG TTTTTTGTTTGTTCA TERM 1761 1438258 - 1438281 + T 100 -8.2 -5.80003 | opp_overlap 1438258 TAATACATGTAAAAA CTAGGCTGAG AATG TTCAGTCTAG TTTTTTGTTTGTTCA SSU05_1499 1438931 - 1438278 - | HAD superfamily hydrolase TERM 1762 1439018 - 1439008 - R 78 -5.4 -4.94058 | opp_overlap 1439008 TCAAGGCAAAGAAAA TTCC CTA GGAA TTTCAGTCTAGTTTT SSU05_1500 1439346 - 1439086 - | cytotoxic translational repressor of toxin-antitoxin stability system SSU05_1501 1439626 - 1439348 - | hypothetical protein TERM 1763 1439589 - 1439607 + g 100 -10.4 -4.65838 | TTCACCTCGCTTCTT TGTGTTAC ATT GTAACACA TTTTTAAAGTATCTG TERM 1764 1439665 - 1439639 - RH 79 -5.1 -5.18357 | opp_overlap 1439639 1439664, overlap 1439642 1439663 CAATCTATCAAAAAA GTACCTTGGGA TGATG CCCCAAAGTGC CTTATATCAAGGCTT TERM 1765 1439742 - 1439703 - RH 76 -7.5 -4.17516 | gap 2, opp_overlap 1439709 1439712 1439715, overlap 1439709 1439712 CTTAAATCATATAAA GTCAAAGAACAAGTCCGAA TATT TTCAGACTTGTTCTT--AC TATATCCCTCACTAT TERM 1766 1439709 - 1439738 + rH 89 -12.3 -3.32993 | opp_overlap 1439703 1439709 1439712, overlap 1439712 1439715 TCATATAAAGTCAAA GAACAAGTCCGAA TATT TTCAGACTTGTTC TTACTATATCCCTCA TERM 1767 1439738 - 1439709 - RH 100 -14.5 -3.91402 | opp_overlap 1439709 1439712 1439715, overlap 1439703 1439712 TCATATAAAGTCAAA GAACAAGTCCGAA TATT TTCAGACTTGTTC TTACTATATCCCTCA TERM 1768 1439712 - 1439735 + rH 74 -8.2 -3.80018 | opp_overlap 1439709 1439703 1439712, overlap 1439709 1439715 TATAAAGTCAAAGAA CAAGTCCGAA TATT TTCAGACTTG TTCTTACTATATCCC TERM 1769 1439735 - 1439712 - RH 89 -10.4 -4.06633 | opp_overlap 1439712 1439709 1439715, overlap 1439709 1439703 TATAAAGTCAAAGAA CAAGTCCGAA TATT TTCAGACTTG TTCTTACTATATCCC TERM 1770 1439798 - 1439821 + rH 100 -14 -3.7732 | opp_overlap 1439798, overlap 1439801 CTGTACTACGAAAAA CAAGTCTGGA AATT TCCAGACTTG TTCTTACTATAACCC TERM 1771 1439821 - 1439798 - RH 100 -14 -4.77036 | opp_overlap 1439798 1439801 CTGTACTACGAAAAA CAAGTCTGGA AATT TCCAGACTTG TTCTTACTATAACCC TERM 1772 1439801 - 1439818 + rH 86 -9.9 -4.0156 | opp_overlap 1439798, overlap 1439798 TACTACGAAAAACAA GTCTGGA AATT TCCAGAC TTGTTCTTACTATAA TERM 1773 1439857 - 1439881 + rH 100 -13.1 -5.11033 | opp_overlap 1439862, overlap 1439862 ATGCTAGCTCAGGGA TAAAACAGTCT CCC AGACTGTTTTA TTTTTTCAAGTTGTA TERM 1774 1439862 - 1439876 + rH 100 -8.6 -5.42198 | opp_overlap 1439862, overlap 1439857 AGCTCAGGGATAAAA CAGTCT CCC AGACTG TTTTATTTTTTCAAG TERM 1775 1439876 - 1439862 - RH 90 -8.6 -4.42653 | opp_overlap 1439857 1439862 AGCTCAGGGATAAAA CAGTCT CCC AGACTG TTTTATTTTTTCAAG SSU05_1503 1441183 - 1439879 - | putative enolase TERM 1776 1440965 - 1440985 + gH 71 -4.7 -4.65895 | overlap 1440942 AGCGTCAGCAATCAC GTTGTTCAC GTT GTCAACAGC TTTTTGAGTACCAAG SSU05_1502 1441177 - 1441314 + | hypothetical protein TERM 1777 1441766 - 1441748 - g 95 -5.3 -5.88565 | opp_overlap 1441748 CCCAGAAGAAAAAAA GGAAGAT GCAAA ACCTTCC TTCTGGAACAAATTA SSU05_1504 1441656 - 1441790 + | hypothetical protein SSU05_1505 1443150 - 1442023 - | glycerate kinase TERM 1778 1442067 - 1442089 + g 100 -9.8 -5.77632 | GAAGAATTCTTGCCA CCTGCTCTGC CGT GCGGACCAGG TTTTTTTCTGCTTTT TERM 1779 1442557 - 1442569 + g 71 -9.1 -3.3164 | opp_overlap 1442565 1442566 TGTGGCACCCGCTGG TCCGC AAA GCGGA TTCTCCACATCCGTT SSU05_1506 1443258 - 1443908 + | phosphatase TERM 1780 1444024 - 1444046 + T 82 -10.6 -3.55444 | TCTGACCTCTATGAC TGATGCGAAC AGA GTTCGCTTCA TTTCCAACCTCAAAC TERM 1781 1444075 - 1444061 - T 78 -8.6 -3.66356 | opp_overlap 1444061 ATTTCCAACCTCAAA CTGTCT CCC AGACAG TTTGAGCTGTGCGGG TERM 1782 1444061 - 1444075 + T 75 -8.6 -3.63627 | opp_overlap 1444061 ATTTCCAACCTCAAA CTGTCT CCC AGACAG TTTGAGCTGTGCGGG SSU05_1507 1445688 - 1444345 - | transposase TERM 1783 1444429 - 1444469 + g 100 -11.9 -5.05505 | GAGACGATGTATGGA GGCAATCGTGTGCGGCTTC GTT GAAGTCGTTTGCGATTGTC TTTTTCGTTTCTCAT TERM 1784 1444845 - 1444865 + g 77 -6.2 -4.63218 | gap 1, opp_overlap 1444845 TTGCATAGTAATGCA CCTCTTCCA GTAT TGGA-GAGG TTTTCTTGACGGCAC TERM 1785 1445775 - 1445737 - R 78 -3.9 -5.40464 | gap 1, opp_overlap 1445750 1445773, overlap 1445711 1445714 1445713 1445731 TATCATAAAGAAAAA GTAGTGAGTACTTTCTCC CGTC GGAGATT-TCCTCACTAC TAATCTTAGTATGTT TERM 1786 1445838 - 1445857 + r 88 -5.1 -5.77856 | opp_overlap 1445838 ATTTACTATCTAAAA TCTCTAT TAGTTT ATAGAGA TTTTTTTCATTTATT SSU05_1508 1446495 - 1445821 - | phosphoserine phosphatase TERM 1787 1446485 - 1446506 + g 75 -10.3 -2.78816 | opp_overlap 1446485 TTCAATGTATAAAAA TAAAAAGCC AAAT GGCTTTTTA TCTAGTAGCGAATGG TERM 1788 1446506 - 1446485 - G 100 -10.3 -4.91712 | opp_overlap 1446485 TTCAATGTATAAAAA TAAAAAGCC AAAT GGCTTTTTA TCTAGTAGCGAATGG SSU05_1509 1448232 - 1446508 - | septation ring formation regulator EzrA gyrB 1450273 - 1448321 - | DNA gyrase subunit B TERM 1789 1449326 - 1449336 + g 85 -4 -5.42605 | CAAATTATCCTCATT TTCT TTG AGAA TTTTATTTTTCTTGG TERM 1790 1449979 - 1449990 + g 85 -5.8 -5.17353 | AGACAGTTTCTACCG CTGG ACGA CCAG TTTTTTCCTGAATAT TERM 1791 1450445 - 1450420 - R 84 -4.7 -5.36441 | TTTTGATAGAAAAAA GAAGAGGAAAC ATTA GCTCCATCTTC TTCATTACTTTAACT SSU05_1511 1451003 - 1450455 - | putative intracellular protease/amidase TERM 1792 1450606 - 1450616 + g 79 -3.2 -5.30616 | TCCAGATGAATACCT GACG GAA TGTC TTTTTCTTTCCCTGG SSU05_1512 1452237 - 1451008 - | rod shape determining protein TERM 1793 1451833 - 1451821 - G 72 -7.7 -3.79882 | ATAATATTTATGAAA GGTGA CAA TCACC CTTGACAACATAATG TERM 1794 1452628 - 1452614 - R 100 -10 -5.65927 | GAGTCAAAGAAAAAA TGGTCC ACT GGACCA TAACTCGCTCTTTTA TERM 1795 1452656 - 1452688 + r 95 -13 -3.55815 | opp_overlap 1452664, overlap 1452664 TTATTTTCAAGCTCG TGAAAAAACAGTCC GTTAA GGACTGTTTTTTTA TTTGAGACCGTATTT TERM 1796 1452664 - 1452680 + r 100 -8 -5.95539 | opp_overlap 1452664, overlap 1452656 AAGCTCGTGAAAAAA CAGTCC GTTAA GGACTG TTTTTTTATTTGAGA TERM 1797 1452680 - 1452664 - R 89 -8 -5.01732 | opp_overlap 1452664 1452656 AAGCTCGTGAAAAAA CAGTCC GTTAA GGACTG TTTTTTTATTTGAGA TERM 1798 1452909 - 1452923 + r 86 -4.2 -5.60864 | opp_overlap 1452901, overlap 1452901 AATAATATACAAAAA GTTGGT ATT GCCAGC TTTTTTTAATGTCTA SSU05_1513 1454273 - 1453701 - | prophage LambdaSa2, site-specific recombinase phage integrase family protein TERM 1799 1454681 - 1454712 + r 83 -7.4 -4.84921 | opp_overlap 1454690 GGCTGTTGGGGTTTC GTCACTACACTTTT TCTA AAAAGTGTTGTAAC TTATTTTTTCTTATA SSU05_1514 1456245 - 1454713 - | virulence-associated protein E SSU05_1515 1456832 - 1456260 - | hypothetical protein SSU05_1516 1457025 - 1456825 - | hypothetical protein TERM 1800 1457269 - 1457293 + rH 74 -4.2 -4.96427 | TTAACTTCTATACCT CGGCTTCTAG CAATA CTTCAAGCCG TTTCTTTTCTTCTTC SSU05_1518 1457578 - 1457261 - | hypothetical protein TERM 1801 1457395 - 1457409 + Gg 71 -5 -4.58213 | overlap 1457397 GATTGCCTTTGCGGT TGCCAA TAA TTGGTA TTTTATGCTTGATTA SSU05_1517 1457351 - 1457464 + | hypothetical protein TERM 1802 1457490 - 1457500 + gT 71 -4.6 -4.67353 | TGTGCTATGTGGCGC GCCG TGA TGGC TTTTTCAATCCCTAC TERM 1803 1457603 - 1457622 + Tr 100 -10.6 -4.74453 | GTATTTCTGGTATTA GCTCGCGC GGTG GCGCGTGC TTTTTCCGTGTGTTG SSU05_1519 1458195 - 1457932 - | hypothetical protein TERM 1804 1458071 - 1458088 + g 76 -2.6 -5.27938 | overlap 1458072 TATAACTCCATTACT TCCCCT TGTCGT AGGGGC TTTTTGTTTAGCCGT TERM 1805 1458233 - 1458245 + r 100 -2.6 -6.37666 | overlap 1458232 TATGCCGCCTAAAAT CGTC TATAC GGCG TTTTTTTTATTTTCT SSU05_1520 1458761 - 1458327 - | unknown phage protein SSU05_1521 1459063 - 1458746 - | hypothetical protein SSU05_1522 1459271 - 1459050 - | hypothetical protein SSU05_1523 1459510 - 1459268 - | hypothetical protein SSU05_1524 1459707 - 1459507 - | hypothetical protein SSU05_1525 1460008 - 1459697 - | hypothetical protein TERM 1806 1460006 - 1460019 + g 86 -8.1 -4.59489 | GTATTTCCTTTCTAG CACGC GCCT GCGTG TTTATTCTTTGGATT TERM 1807 1460086 - 1460114 + r 73 -3.2 -5.10004 | overlap 1460087 1460089 1460105 1460107 TTTTGTCGTTGGTCG TAGTTTTAAGGG GTACG CCCTTAAAATGG TTTTTAGTTCTTTTT TERM 1808 1460089 - 1460111 + r 76 -9.3 -3.35029 | overlap 1460087 1460086 1460105 1460107 TGTCGTTGGTCGTAG TTTTAAGGG GTACG CCCTTAAAA TGGTTTTTAGTTCTT TERM 1809 1460184 - 1460208 + r 86 -6.5 -5.09426 | opp_overlap 1460172 1460188 AAATAGCCATTGTAA GATAGCTAG AATGTGC CTAGCTGTC TTTTTTAGGGTTAGA SSU05_1526 1460493 - 1460305 - | transcriptional regulator SSU05_1527 1460645 - 1461166 + | transcriptional regulator TERM 1810 1461192 - 1461171 - f 84 -4.3 -5.46276 | AAGACACATAAAAAA CGCAAACCC CAGC AGGTCGGCG CGTGGAATAAATCAA SSU05_1528 1461420 - 1461914 + | Gp21 protein TERM 1811 1462105 - 1462127 + F 78 -5.6 -5.01823 | overlap 1462100 TTGTCATTACAAAAA GGTGGAATAG TTT TTATTCTGCC TTTTATTGTTATTCT TERM 1812 1462181 - 1462160 - f 78 -10.1 -3.41073 | overlap 1462158 GATGTTACGGAAATA CGCCAACCC CAGC AGGTCGGCG CGTGGTAATATACGA TERM 1813 1462307 - 1462282 - f 91 -6.8 -5.40004 | opp_overlap 1462283, overlap 1462283 CACTAAATCAAAAAA GCCCCCAACG TGCCAG CGTTGAGGGT TTTTGTTTGCCCCTG TERM 1814 1462306 - 1462283 - f 86 -10.3 -3.82375 | opp_overlap 1462283, overlap 1462282 ACTAAATCAAAAAAG CCCCCAACG TGCCAG CGTTGAGGG TTTTTGTTTGCCCCT TERM 1815 1462283 - 1462306 + F 100 -8.8 -5.27938 | opp_overlap 1462283 1462282 ACTAAATCAAAAAAG CCCCCAACGT GCCA GCGTTGAGGG TTTTTGTTTGCCCCT TERM 1816 1463155 - 1463128 - g 78 -2.1 -5.58051 | gap 1 AAAGAAAAAAGAAAA CTTTTACA-GCC GTGAA GACTTGCAAAAG TTCCTAGACTGCGTA TERM 1817 1463385 - 1463359 - g 85 -2.3 -5.80951 | gap 1 ACCCAAAACAAAAAA GAGT-AAGCGCA CTAT CACGCTTGACCC TATTACCGTGTCTAT SSU05_1529 1462601 - 1463623 + | prophage Lp3 protein 1, integrase SSU05_1530 1463601 - 1463744 + | integrase TERM 1818 1463809 - 1463787 - T 100 -10.6 -5.27023 | opp_overlap 1463790 ATTTCAAAAAGAAAA CCATTCCCAC GGC ACGGGAATGG CTTAAAATCAACGTT rpmE2 1464089 - 1463847 - | 50S ribosomal protein L31 type B TERM 1819 1464062 - 1464080 + g 84 -3.9 -5.46698 | TGAAGACAACAGTGC GATATTC TGGAT GGATATC TTTTTTCATTTTAAA SSU05_1532 1465236 - 1464208 - | lipoprotein involved thiamine biosynthesis SSU05_1533 1465984 - 1465223 - | hypothetical protein TERM 1820 1465324 - 1465336 + g 75 -9.1 -3.60006 | CTAGTGGGTGGCCAC CGCCA TCA TGGCG TTTGGCAATCTCGTT TERM 1821 1465483 - 1465467 - G 70 -7.9 -3.65415 | opp_overlap 1465464, overlap 1465463 CCAACGATAAAGGAA GTGTCCG CAT CGGTCAC CCCGTATTTTTCGAG SSU05_1534 1466231 - 1466722 + | putative flavodoxin TERM 1822 1466731 - 1466759 + F 81 -5.4 -5.10163 | gap 1 GAATTAACTGACAAA CAGACT-GGCTTA TCAA TAGGTCTAGTCTG TTTTCTTTTAGCCTT SSU05_1535 1466864 - 1467133 + | 30S ribosomal protein S14 TERM 1823 1467138 - 1467122 - f 78 -3.7 -5.40072 | CCTGGGGTAAAAAAA GCAAGTT GGT AACTTCC TCAAACAAGGCTAGT TERM 1824 1467144 - 1467164 + F 83 -6.2 -5.23316 | gap 1, opp_overlap 1467144 1467147 GGTAACTTCCTCAAA CAAGGCTAG TATT CT-GCCTTG TTTTTTGCTATACTA SSU05_1536 1467215 - 1467493 + | chorismate mutase SSU05_1537 1467483 - 1468697 + | hypothetical protein TERM 1825 1468708 - 1468676 - T 78 -8.6 -3.78904 | opp_overlap 1468678 1468685, overlap 1468685 GAGGAAATTCAATAA TGCAAAAAAGCCTA TCATC TAGGCTTTTTCGTA TACTCTTCATCTCCC TERM 1826 1468678 - 1468706 + T 70 -9 -2.94062 | opp_overlap 1468676 1468685, overlap 1468685 GGAAATTCAATAATG CAAAAAAGCCTA TCATC TAGGCTTTTTCG TATACTCTTCATCTC TERM 1827 1468699 - 1468685 - T 81 -5.7 -5.2166 | opp_overlap 1468678 1468685, overlap 1468676 CAATAATGCAAAAAA GCCTA TCATC TAGGC TTTTTCGTATACTCT TERM 1828 1468685 - 1468699 + T 75 -5.7 -4.83269 | opp_overlap 1468685 1468676, overlap 1468678 CAATAATGCAAAAAA GCCTA TCATC TAGGC TTTTTCGTATACTCT SSU05_1538 1471015 - 1468985 - | putative 5'-nucleotidase TERM 1829 1471263 - 1471244 - R 100 -10.8 -5.32944 | opp_overlap 1471243 1471242 CTCACAACTAAAAAA TCTCTTCC AAAC GGAAGAGA ACTGTTCTTATTTAG SSU05_1539 1471840 - 1471271 - | manganese-dependent superoxide dismutase holA 1472877 - 1471990 - | DNA polymerase III subunit delta TERM 1830 1473085 - 1473061 - R 82 -6.4 -4.91511 | opp_overlap 1473061 ATTGTACCACAAAAA GAGCCTAGAC ATAAA GTCTGGACTC TTTCATTGAAATTTA SSU05_1541 1473763 - 1473173 - | hypothetical protein SSU05_1542 1474650 - 1473871 - | hypothetical protein TERM 1831 1474745 - 1474733 - R 100 -9.1 -4.74103 | opp_overlap 1474733 TTTCCAACTTAAAAA GGTCC CTC GGACC TTGATATAAAGAAAA TERM 1832 1474733 - 1474745 + r 71 -9.1 -3.25823 | opp_overlap 1474733 TTTCCAACTTAAAAA GGTCC CTC GGACC TTGATATAAAGAAAA TERM 1833 1474779 - 1474756 - R 79 -8.2 -4.04206 | overlap 1474762 GGACCTTGATATAAA GAAAAACGCC TGCC GACGTTTCTC ATCTCCAGCTTAAAA TERM 1834 1474773 - 1474762 - R 81 -3.6 -5.42975 | overlap 1474756 TGATATAAAGAAAAA CGCC TGCC GACG TTTCTCATCTCCAGC TERM 1835 1474817 - 1474840 + r 72 -9.6 -2.73124 | opp_overlap 1474817 1474822, overlap 1474822 TAACCCACTTGTAAA GAAAACCGCT TACC AGCGGTTCTC ATTTCCAACCTAAAA TERM 1836 1474840 - 1474817 - R 87 -11.8 -3.58269 | opp_overlap 1474817 1474822, overlap 1474822 TAACCCACTTGTAAA GAAAACCGCT TACC AGCGGTTCTC ATTTCCAACCTAAAA TERM 1837 1474822 - 1474835 + r 72 -8.1 -3.60151 | opp_overlap 1474822 1474817, overlap 1474817 CACTTGTAAAGAAAA CCGCT TACC AGCGG TTCTCATTTCCAACC TERM 1838 1474835 - 1474822 - R 95 -8.1 -4.87803 | opp_overlap 1474817 1474822, overlap 1474817 CACTTGTAAAGAAAA CCGCT TACC AGCGG TTCTCATTTCCAACC TERM 1839 1474870 - 1474856 - R 73 -6.4 -4.27584 | ATTTCCAACCTAAAA CAACCC GTC AGGTTG GGGACAAACCAGCAA TERM 1840 1474872 - 1474904 + r 75 -10.1 -2.89742 | gap 1, opp_overlap 1474879, overlap 1474879 AACCCGTCAGGTTGG GGACAAACCAGCAA CATGCA TTGCTGGTTT-TCC TATCTCCCGATTAAA TERM 1841 1474879 - 1474898 + r 82 -7.9 -4.39166 | opp_overlap 1474879, overlap 1474872 CAGGTTGGGGACAAA CCAGCAA CATGCA TTGCTGG TTTTCCTATCTCCCG TERM 1842 1474898 - 1474879 - R 80 -8.6 -3.86015 | opp_overlap 1474879 1474872 CAGGTTGGGGACAAA CCAGCAAC ATGC ATTGCTGG TTTTCCTATCTCCCG TERM 1843 1474957 - 1474944 - R 100 -8.1 -5.80817 | opp_overlap 1474944 CCGAATATAAAAAAA CTGCC TGCC GGCAG TTCTCATTTTCAACT TERM 1844 1474944 - 1474957 + r 74 -8.1 -3.68761 | opp_overlap 1474944 CCGAATATAAAAAAA CTGCC TGCC GGCAG TTCTCATTTTCAACT TERM 1845 1475000 - 1475023 + r 72 -9.6 -2.73124 | opp_overlap 1475000 1475005, overlap 1475005 TAACCCACTTATAAA GAAAACCGCT TACC AGCGGTTCTC ATTTCCAACCTAAAA TERM 1846 1475023 - 1475000 - R 91 -11.8 -3.93583 | opp_overlap 1475000 1475005, overlap 1475005 TAACCCACTTATAAA GAAAACCGCT TACC AGCGGTTCTC ATTTCCAACCTAAAA TERM 1847 1475018 - 1475005 - R 95 -8.1 -5.0065 | opp_overlap 1475000 1475005, overlap 1475000 CACTTATAAAGAAAA CCGCT TACC AGCGG TTCTCATTTCCAACC TERM 1848 1475005 - 1475018 + r 72 -8.1 -3.60151 | opp_overlap 1475005 1475000, overlap 1475000 CACTTATAAAGAAAA CCGCT TACC AGCGG TTCTCATTTCCAACC TERM 1849 1475052 - 1475040 - R 100 -9.1 -4.74103 | opp_overlap 1475040 TTTCCAACCTAAAAA GGTCC CCC GGACC TTTTTAGCCACCCAG TERM 1850 1475040 - 1475052 + r 90 -9.1 -4.56597 | opp_overlap 1475040 TTTCCAACCTAAAAA GGTCC CCC GGACC TTTTTAGCCACCCAG SSU05_1543 1475766 - 1475056 - | ABC-type branched-chain amino acid transport system, ATPase component TERM 1851 1475293 - 1475269 - G 72 -9.3 -3.08187 | opp_overlap 1475262 AAAGATCGGAGCCAA GCCCATTGATG GTT CATCAAGGAGC AAGAGCTTTGGTTGG SSU05_1544 1476437 - 1475766 - | ABC-type branched-chain amino acid transport system, ATPase component SSU05_1545 1476531 - 1476406 - | ABC-type branched-chain amino acid transport system, ATPase component SSU05_1546 1477478 - 1476531 - | ABC-type branched-chain amino acid transport system, permease component SSU05_1547 1478368 - 1477481 - | branched chain amino acid ABC transporter permease TERM 1852 1478557 - 1478570 + r 81 -8.1 -4.28018 | opp_overlap 1478550 1478557 CTGACAAGTGAAAAA GAGGG AATT CCCTC TTTTCATCCACTATT TERM 1853 1478570 - 1478557 - R 95 -8.1 -4.78149 | opp_overlap 1478557, overlap 1478550 CTGACAAGTGAAAAA GAGGG AATT CCCTC TTTTCATCCACTATT SSU05_1548 1479753 - 1478584 - | hypothetical protein TERM 1854 1479850 - 1479838 - R 100 -3.5 -6.28401 | CAAAAAAGAAAAAAA TTTTA AAA TAAAA AATTAGCAGGGAATA TERM 1855 1479877 - 1479853 - R 100 -7.2 -5.79595 | opp_overlap 1479856 TTTTAAAATAAAAAA TTAGCAGGGA ATACA TACCTGCTAA TTCCGACTATCCTAC SSU05_1549 1480156 - 1479884 - | hypothetical protein TERM 1856 1480243 - 1480215 - R 90 -9 -4.64383 | gap 1 AATGATAAATGAAAA GCTCCAACTACCT GTAA AAG-AGTTGGAGC TAATAGGAATAGTCA SSU05_1550 1480586 - 1480431 - | ATP-dependent Clp protease proteolytic subunit SSU05_1551 1480880 - 1480707 - | putative ATP-dependent Clp protease, proteolytic subunit TERM 1857 1480971 - 1480991 + rH 74 -8.3 -3.72078 | opp_overlap 1480971, overlap 1480964 1480975 TCAGGAAATGAAAAA GAAACCAGC AGA GCTGATTTC TTAATTATTTTGTAC TERM 1858 1480991 - 1480971 - RH 100 -10.5 -5.01811 | opp_overlap 1480971 1480964 1480975 TCAGGAAATGAAAAA GAAACCAGC AGA GCTGATTTC TTAATTATTTTGTAC upp 1481625 - 1480996 - | uracil phosphoribosyltransferase SSU05_1552 1481611 - 1481715 + | hypothetical protein SSU05_1554 1483321 - 1481705 - | glycosidase TERM 1859 1483374 - 1483364 - R 76 -4.6 -5.13741 | opp_overlap 1483358 1483364, overlap 1483358 TTAATGTAAGAAAAA GAGG TGT CCCC CTCTTTCTATATAAT SSU05_1555 1484842 - 1483394 - | glycosidase TERM 1860 1484099 - 1484109 + g 70 -5.4 -4.4767 | ATAAACATAATAATC TTGC TCG GCAA TTTTCTGCTGAATGG TERM 1861 1484905 - 1484889 - R 76 -6.6 -4.4009 | opp_overlap 1484889 TGTTATTTTATAAAA GGTTGA ACTAG TCAACC TTAGTAATTATTTGA SSU05_1556 1485764 - 1484913 - | ABC-type sugar transport system, permease component SSU05_1557 1486629 - 1485754 - | ABC-type sugar transport system, permease component SSU05_1558 1487996 - 1486761 - | ABC-type sugar transport system, periplasmic component TERM 1862 1487971 - 1487983 + g 71 -4.9 -4.72729 | overlap 1487976 GCACAAACCGATGCA CATTT TAA AAATG TTTTCATTTTCATTA SSU05_1560 1490183 - 1488009 - | Alpha-galactosidase TERM 1863 1488177 - 1488193 + gH 73 -5.1 -4.61231 | opp_overlap 1488161, overlap 1488164 ATGAAGCAAAGGCGC TTCTGGC TTG GCAAGAA TTTTTACAAATGTAA SSU05_1559 1490132 - 1491127 + | AraC-type DNA-binding domain-containing protein TERM 1864 1491163 - 1491108 - TR 82 -6.5 -4.93318 | opp_overlap 1491118, overlap 1491110 1491118 CAGAATTTAGAAAAA CACAAAAAAATAAGGATTAGGTG ATTTTACTCA CACCTAGTCCTTATTTCTTTATC CAAAAACCTTACCAA TERM 1865 1491161 - 1491110 - TR 81 -9.1 -4.07789 | opp_overlap 1491118, overlap 1491108 1491118 GAATTTAGAAAAACA CAAAAAAATAAGGATTAGGTG ATTTTACTCA CACCTAGTCCTTATTTCTTTA TCCAAAAACCTTACC TERM 1866 1491153 - 1491118 - TR 100 -6.3 -5.9667 | opp_overlap 1491118, overlap 1491110 1491108 AAAAACACAAAAAAA TAAGGATTAGGTG ATTTTACTCA CACCTAGTCCTTA TTTCTTTATCCAAAA TERM 1867 1491118 - 1491153 + Tr 88 -8.5 -4.55295 | opp_overlap 1491118 1491110 1491108 AAAAACACAAAAAAA TAAGGATTAGGTG ATTTTACTCA CACCTAGTCCTTA TTTCTTTATCCAAAA SSU05_1561 1492319 - 1491159 - | bifunctional beta-cystathionase/maltose regulon repressor SSU05_1562 1493414 - 1492323 - | cystathionine gamma-synthase SSU05_1563 1493607 - 1493882 + | hypothetical protein SSU05_1564 1493896 - 1494150 + | hypothetical protein SSU05_1565 1494160 - 1494411 + | hypothetical protein TERM 1868 1494562 - 1494586 + F 74 -4.8 -4.87803 | opp_overlap 1494561 CGAACACTGAGAAGT GGGCCAGGGC TTTTT GCCCAGCCTC TTTTCTTTCAAAATA SSU05_1566 1494606 - 1495388 + | O-methyltransferase SSU05_1567 1495366 - 1495647 + | endonuclease SSU05_1568 1495616 - 1496005 + | hypothetical protein TERM 1869 1495995 - 1496012 + T 81 -5.5 -5.19261 | opp_overlap 1495995 1495984 AGGACAAGCAAAAAA CTGGCTC TTAG GAACCAG TTTTTTAATAGCTTT TERM 1870 1496012 - 1495995 - T 95 -7.7 -5.33848 | opp_overlap 1495995, overlap 1495984 AGGACAAGCAAAAAA CTGGCTC TTAG GAACCAG TTTTTTAATAGCTTT SSU05_1569 1496331 - 1496017 - | Acyl carrier protein phosphodiesterase SSU05_1570 1496627 - 1496328 - | Acyl carrier protein phosphodiesterase TERM 1871 1496687 - 1496705 + r 78 -9 -3.72576 | opp_overlap 1496703 ATATTCTACTCTTTT TGATTTGA AAT TCAAATCA TTTGCTCGAAGCAAA TERM 1872 1496716 - 1496742 + r 90 -7.3 -5.23016 | gap 1, opp_overlap 1496706 1496703 1496722, overlap 1496720 1496722 AATCATTTGCTCGAA GCAAAAGGCTGG TCTC CCAGCC-TCTGC TTTTTTAGATTGTTT TERM 1873 1496737 - 1496722 - R 95 -10.4 -4.4078 | opp_overlap 1496720 1496716 1496722, overlap 1496703 TTGCTCGAAGCAAAA GGCTGG TCTC CCAGCC TCTGCTTTTTTAGAT TERM 1874 1496722 - 1496737 + r 79 -10.4 -3.25779 | opp_overlap 1496703 1496722, overlap 1496720 1496716 TTGCTCGAAGCAAAA GGCTGG TCTC CCAGCC TCTGCTTTTTTAGAT SSU05_1571 1497167 - 1496760 - | histone acetyltransferase HPA2-like acetyltransferase TERM 1875 1497270 - 1497289 + r 76 -6.4 -4.37092 | opp_overlap 1497270 TTAGTATAACAAAAA CTGCTCCA ATTA TGAAGCAG TTTTGTAACGACGAT TERM 1876 1497289 - 1497270 - R 100 -8.6 -5.22006 | opp_overlap 1497270 TTAGTATAACAAAAA CTGCTCCA ATTA TGAAGCAG TTTTGTAACGACGAT SSU05_1572 1497896 - 1497279 - | integral membrane protein SSU05_1573 1498146 - 1497868 - | transcriptional regulator TERM 1877 1498165 - 1498190 + r 76 -10.7 -2.72677 | opp_overlap 1498180, overlap 1498164 AAGCCTCCTTGTCCA TCTATTTAGAA ATAT TTCTAAATAGA ATTATACTCTGTTTT TERM 1878 1498279 - 1498259 - R 100 -7.6 -5.79526 | AGATTTCAAAAAAAA CAGACCAC TCTTT ATGGTCTG TCAAATCCGGCTTAT SSU05_1574 1499835 - 1498291 - | superfamily II DNA/RNA helicase TERM 1879 1499409 - 1499430 + g 70 -7.3 -3.74693 | opp_overlap 1499408 TAAGGGTTTCAACAC CGTCAAGCT TGAG AGCTTTACG TTTGATCAAGTCCAA TERM 1880 1500219 - 1500264 + r 95 -7.8 -5.4182 | opp_overlap 1500224, overlap 1500221 1500224 TTCATTCGACTATAA GAAAAGAGAAACCTAGTTAT ACATGC ACAACTAGGTTTCTCTTGTA TTTTTATTTATGATT TERM 1881 1500221 - 1500262 + r 90 -10.4 -4.31946 | opp_overlap 1500224, overlap 1500219 1500224 CATTCGACTATAAGA AAAGAGAAACCTAGTTAT ACATGC ACAACTAGGTTTCTCTTG TATTTTTATTTATGA TERM 1882 1500224 - 1500259 + r 93 -12.1 -4.22352 | opp_overlap 1500224, overlap 1500221 1500219 TCGACTATAAGAAAA GAGAAACCTAGTTAT ACATGC ACAACTAGGTTTCTC TTGTATTTTTATTTA TERM 1883 1500259 - 1500224 - R 100 -15 -4.81212 | opp_overlap 1500224 1500221 1500219 TCGACTATAAGAAAA GAGAAACCTAGTTATA CATG CACAACTAGGTTTCTC TTGTATTTTTATTTA SSU05_1575 1500861 - 1500268 - | hypothetical protein TERM 1884 1500929 - 1500904 - R 100 -8.3 -5.59357 | opp_overlap 1500903 1500905, overlap 1500905 AGTATATCAAAAAAA GCAGAAAGCGG ATAG CCACTTTCTGT ACTTTTTTCCTATTT TERM 1885 1500928 - 1500905 - R 91 -11.8 -3.93988 | opp_overlap 1500903 1500905, overlap 1500904 GTATATCAAAAAAAG CAGAAAGCGG ATAG CCACTTTCTG TACTTTTTTCCTATT TERM 1886 1500905 - 1500928 + r 76 -9.6 -3.44212 | opp_overlap 1500905 1500904, overlap 1500903 GTATATCAAAAAAAG CAGAAAGCGG ATAG CCACTTTCTG TACTTTTTTCCTATT SSU05_1576 1501361 - 1500939 - | superfamily I DNA/RNA helicase SSU05_1577 1503854 - 1501413 - | putative internalin A precursor TERM 1887 1504816 - 1504802 - g 72 -7.8 -3.75144 | opp_overlap 1504801 1504802 AAGAATACTTAACAA CCGCTC TCG GAGCAG ATTATGAAAAGCAAT SSU05_1578 1504375 - 1505127 + | hypothetical protein TERM 1888 1505198 - 1505229 + T 93 -12.4 -4.08144 | opp_overlap 1505194 1505192 1505198 GAAAATAAATATGAA GCCCTCACTAGG TGTATAAT CTTAGTGAGGGC TTTGTGCTTGATGAG TERM 1889 1505229 - 1505198 - T 80 -10.2 -3.60072 | opp_overlap 1505198, overlap 1505194 1505192 GAAAATAAATATGAA GCCCTCACTAGG TGTATAAT CTTAGTGAGGGC TTTGTGCTTGATGAG SSU05_1579 1506176 - 1505646 - | ammonia permease SSU05_1580 1507018 - 1506173 - | putative pyridoxal kinase TERM 1890 1507182 - 1507161 - R 89 -5.9 -5.25699 | ATTACATAAGAAAAA CAGCAACAA CTCT TTGCTACTG TCATCCTCTTCAATG SSU05_1581 1507906 - 1507217 - | 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase SSU05_1582 1508235 - 1507915 - | hypothetical protein SSU05_1583 1508791 - 1508246 - | NTP pyrophosphohydrolase including oxidative damage repair enzymes SSU05_1584 1510200 - 1508800 - | N-acetylglucosamine-1-phosphate uridyltransferase TERM 1891 1510299 - 1510277 - R 100 -7.8 -5.63517 | opp_overlap 1510281 TTCGTAAATAAAAAA GAAACTGG AATGAAG CCAGTTTC TCAAAAATTTCTAGT TERM 1892 1510322 - 1510307 - R 71 -4.8 -4.57569 | CCAGTTTCTCAAAAA TTTCTA GTAT TAGAAA ACAAACTACAGGTTG TERM 1893 1510351 - 1510328 - R 78 -6 -4.80453 | opp_overlap 1510349 GTATTAGAAAACAAA CTACAGGTTG ATTG CATCCTATAG AATTGTCTATTTAGG SSU05_1585 1510828 - 1510358 - | hypothetical protein SSU05_1586 1511013 - 1510825 - | hypothetical protein TERM 1894 1510880 - 1510900 + g 73 -8.4 -3.62518 | TGATCAAGTAAAGCC TCAAATCC ATAAG GGATTTGA TTTAGAAGTGTTTCG fabG 1511815 - 1511117 - | 3-ketoacyl-(acyl-carrier-protein) reductase TERM 1895 1511663 - 1511642 - G 93 -10.1 -4.30576 | CTGGCACCAGGAAAA GACGGGCGA TAAA TCGCCTGTC AGGTCCAGCTGTAGA SSU05_1588 1512044 - 1511808 - | hypothetical protein TERM 1896 1511989 - 1512000 + g 71 -2.2 -5.10208 | GCCCCACCCCAGCCT GTGC GAAC GTAC TTTTTCTTGGCCTTC SSU05_1589 1512925 - 1512104 - | hypothetical protein SSU05_1590 1513247 - 1512912 - | transcriptional regulator SSU05_1591 1513408 - 1513244 - | hypothetical protein TERM 1897 1513602 - 1513573 - R 100 -10.1 -5.85178 | gap 1, opp_overlap 1513579, overlap 1513577 AATATTCAAAAAAAA TCATGACCACCCGT CAA ACGGGTGGTT-TGA ACAAGGGCTATAAGC TERM 1898 1513599 - 1513577 - R 83 -12 -2.75327 | opp_overlap 1513579, overlap 1513573 TTCAAAAAAAATCAT GACCACCCGT CAA ACGGGTGGTT TGAACAAGGGCTATA TERM 1899 1513579 - 1513597 + r 100 -14.6 -3.53224 | opp_overlap 1513577 1513573 CAAAAAAAATCATGA CCACCCGT CAA ACGGGTGG TTTGAACAAGGGCTA TERM 1900 1513619 - 1513607 - R 75 -9.1 -3.61398 | GGGTGGTTTGAACAA GGGCT ATA AGCCC ACATCACCAGCCAGC TERM 1901 1513629 - 1513650 + r 91 -11.5 -3.93262 | opp_overlap 1513626 AAGCCCACATCACCA GCCAGCGCC TAAA GACGCTGGC TTTCACTTTGTTCAA TERM 1902 1513692 - 1513706 + r 73 -10 -2.54687 | overlap 1513691 TTTGACTCGTCACTA GCCTCT TAA AGAGGC ATTCGTACTACTTGC SSU05_1592 1514214 - 1513714 - | IS200 family transposase TERM 1903 1514261 - 1514279 + r 91 -10.2 -4.55295 | overlap 1514262 TGTAACCTTCGTCGC GCACCCGC ATA GCGGGTGG TTTATTTGTCACGCA TERM 1904 1514262 - 1514278 + r 100 -13.7 -3.32695 | overlap 1514261 GTAACCTTCGTCGCG CACCCGC ATA GCGGGTG GTTTATTTGTCACGC TERM 1905 1514336 - 1514351 + r 75 -9 -3.5627 | opp_overlap 1514336 TCACATAATTAAAAA CTTGGG TTCC CCCAAG TTTAGGAAATAATCT TERM 1906 1514351 - 1514336 - R 100 -9 -4.96646 | opp_overlap 1514336 TCACATAATTAAAAA CTTGGG TTCC CCCAAG TTTAGGAAATAATCT SSU05_1593 1516371 - 1514353 - | ABC transporter membrane-spanning permease - unknown substrate TERM 1907 1514764 - 1514750 - G 72 -6.4 -4.32607 | GCAAAACTGAAGAAA CTACGC ATC GCATAG GCACGGTAGGCGAGA SSU05_1594 1517122 - 1516364 - | peptide ABC transporter ATPase SSU05_1595 1518210 - 1517218 - | Signal transduction histidine kinase SSU05_1596 1518886 - 1518203 - | response regulator SSU05_1597 1519056 - 1520237 + | hypothetical protein TERM 1908 1520264 - 1520225 - T 100 -21.2 -4.36778 | opp_overlap 1520229 1520234, overlap 1520229 1520234 AAATACAACTGAAAA TAAAGAAAACTAGCTCAA CCAC TTGAGCTAGTTTTCTTTA TCAAATCTTCTTAAA TERM 1909 1520260 - 1520229 - T 100 -17.6 -4.73092 | opp_overlap 1520229 1520234, overlap 1520225 1520234 ACAACTGAAAATAAA GAAAACTAGCTCAA CCAC TTGAGCTAGTTTTC TTTATCAAATCTTCT TERM 1910 1520229 - 1520260 + T 100 -17.6 -3.93004 | opp_overlap 1520229 1520225 1520234, overlap 1520234 ACAACTGAAAATAAA GAAAACTAGCTCAA CCAC TTGAGCTAGTTTTC TTTATCAAATCTTCT TERM 1911 1520255 - 1520234 - T 100 -11.7 -5.26247 | opp_overlap 1520229 1520234, overlap 1520229 1520225 TGAAAATAAAGAAAA CTAGCTCAA CCAC TTGAGCTAG TTTTCTTTATCAAAT TERM 1912 1520234 - 1520255 + T 100 -11.7 -4.99645 | opp_overlap 1520234 1520229 1520225, overlap 1520229 TGAAAATAAAGAAAA CTAGCTCAA CCAC TTGAGCTAG TTTTCTTTATCAAAT SSU05_1598 1521376 - 1520252 - | transaminase TERM 1913 1520294 - 1520313 + g 73 -5.8 -4.44667 | overlap 1520295 AAATTGAGATAATTT TTCTAATC CTTT GATTAGAG TTTCTTGTTCACAGG TERM 1914 1521507 - 1521482 - R 74 -3.9 -5.19212 | ACTATTATTAAAAAA CAGACTTTCTC AAAC GAGACTGCCTG CTCTGCTTTTTTCCC SSU05_1599 1522284 - 1521523 - | hypothetical protein SSU05_1600 1523805 - 1522294 - | periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) TERM 1915 1523324 - 1523311 - G 70 -5.9 -4.3953 | TCCAAGTAGAATAAA GGAGC CCAG GCCCC CAGCCCCCACCAAGG SSU05_1601 1524539 - 1523805 - | ABC-type proline/glycine betaine transport system, ATPase component SSU05_1602 1524978 - 1524529 - | transcriptional regulator TERM 1916 1525140 - 1525122 - R 93 -6.1 -5.86609 | opp_overlap 1525122 CCAAAAAAAGAAAAA TAGTCAA TCATT TTGACTA TTTTGAGACATCAAC TERM 1917 1525286 - 1525253 - R 82 -10.5 -3.63046 | opp_overlap 1525253 1525258, overlap 1525258 ATGATAATCAGATAA CAAAACTAGCCTAGA AAAT TCTAAGCTAGTTTCA TTTTATCCTTCAACT TERM 1918 1525258 - 1525281 + r 81 -8.2 -4.29391 | opp_overlap 1525253 1525258, overlap 1525253 AATCAGATAACAAAA CTAGCCTAGA AAAT TCTAAGCTAG TTTCATTTTATCCTT TERM 1919 1525281 - 1525258 - R 100 -10.4 -4.86822 | opp_overlap 1525258 1525253, overlap 1525253 AATCAGATAACAAAA CTAGCCTAGA AAAT TCTAAGCTAG TTTCATTTTATCCTT SSU05_1603 1525825 - 1525289 - | Signal recognition particle GTPase TERM 1920 1525771 - 1525755 - G 72 -6.5 -4.37886 | overlap 1525758 TTACTTGCTAGAAAA GCAGCTG CAG CAGCTCC GCCGGCTGCCCCTAA SSU05_1604 1526279 - 1525809 - | methyl-accepting chemotaxis-like domain-containing protein SSU05_1605 1527036 - 1526233 - | prolipoprotein diacylglyceryl transferase TERM 1921 1526962 - 1526952 - GR 70 -5.4 -4.4773 | TCAGACCAAGCAAAA TGCA GAT TGCA TACCAACGAATTTCT SSU05_1606 1528111 - 1527011 - | HPr kinase/phosphorylase TERM 1922 1527594 - 1527628 + gH 80 -2.9 -5.45802 | gap 1, overlap 1527592 1527598 TCTCCCGATAGACGA CTGGTTGCTGTCTTGC TTCG GCA-GATAGCAATTTG TTTTTCTTTTGCAGC TERM 1923 1527598 - 1527624 + gH 88 -6.7 -5.18409 | gap 1, overlap 1527592 1527594 CCGATAGACGACTGG TTGCTGTCTTGC TTCG GCA-GATAGCAA TTTGTTTTTCTTTTG SSU05_1607 1528160 - 1529101 + | phosphomannose isomerase TERM 1924 1529114 - 1529133 + F 81 -3.6 -5.57054 | opp_overlap 1529114 TAAGCATACAAAAAA CTTGAG CCTTTAAA CTCAAG TTTTTTTGCATTATT TERM 1925 1529133 - 1529114 - f 84 -5 -5.42131 | opp_overlap 1529114 TAAGCATACAAAAAA CTTGAGCC TTTA AACTCAAG TTTTTTTGCATTATT TERM 1926 1529407 - 1529385 - g 70 -2.7 -5.0133 | overlap 1529386 GATTTTCGTAAAAAA GTTCTCGCA TACTG TGAGAAAAC CGGCAGTATTACTGA SSU05_1608 1529355 - 1529705 + | transposase TERM 1927 1530175 - 1530131 - g 77 -3.7 -5.21709 | gap 1, opp_overlap 1530143, overlap 1530133 GCTCACATCAAAAAA CACCTC-AGAAGAGTATTGC CAAATT GCGATACTTTTCTTGAGGCA CTTTCGTCCTGCTCT SSU05_1609 1529723 - 1530202 + | IS630-Spn1, transposase Orf2 SSU05_1610 1531065 - 1530304 - | hypothetical protein TERM 1928 1530469 - 1530482 + g 72 -8.1 -3.89346 | CTGCCCCCGAATTCC CTGGC CTTT GCCAG TTTGTAAAGTCAAGG TERM 1929 1530923 - 1530939 + g 86 -6.7 -5.06414 | TTAAAACTTGGCAAG GTAAAAT TCA ATTTTAC TTTTTCTTCCACAAA TERM 1930 1531130 - 1531115 - R 88 -5.4 -5.60993 | opp_overlap 1531115 TTCTCCACAAAAAAA TCAGCC CGAA GACTGA TTCTCTATTCTTTCA SSU05_1611 1531569 - 1531135 - | hypothetical protein TERM 1931 1531489 - 1531465 - G 73 -3.6 -5.00884 | gap 1 ATCCCTTGGAAAAAA GCGACCAC-CT GTTG AGCGTAATCGC CTGTTCCAGATTGCT SSU05_1612 1532554 - 1531556 - | transcriptional accessory protein TERM 1932 1531792 - 1531775 - G 70 -7.7 -3.60074 | CACAAAGGCTCCAAA GTCCACA ATAT TGCGGAC CGTACCTTGCAATTC TERM 1933 1532234 - 1532218 - G 76 -9.5 -3.53444 | CGATGTTCTCCGAAA TGGTCTT GTT AAGACCA GCAACGTGAGCCAAA TERM 1934 1532571 - 1532551 - G 95 -7.6 -5.0916 | GGCTCAATAGAAAAA GCACGTAG ATAAA CTACATGC TCTCAATAGCTAATT SSU05_1613 1533553 - 1532585 - | aldo/keto reductase family oxidoreductase TERM 1935 1533522 - 1533507 - G 84 -5.4 -5.2853 | GACCTAAAAATAAAA GACACC CGAA AGTGTC TGCTCACATTTATTG SSU05_1614 1534058 - 1533543 - | hypothetical protein SSU05_1615 1534187 - 1534624 + | hypothetical protein TERM 1936 1534648 - 1534615 - T 81 -6.9 -4.59773 | gap 1, opp_overlap 1534622, overlap 1534622 CTTTATCTTTAAAAA TACGAAATGAGGCTCC AAC GGAACCTCATTTT-TA TATATAGCTTGATTT TERM 1937 1534622 - 1534642 + T 100 -9.7 -5.04597 | opp_overlap 1534615 1534622 TTTAAAAATACGAAA TGAGGCTCC AAC GGAACCTCA TTTTTATATATAGCT TERM 1938 1534642 - 1534622 - T 93 -11.9 -4.13748 | opp_overlap 1534622, overlap 1534615 TTTAAAAATACGAAA TGAGGCTCC AAC GGAACCTCA TTTTTATATATAGCT SSU05_1616 1535612 - 1534671 - | hypothetical protein SSU05_1617 1536502 - 1535642 - | methionine aminopeptidase SSU05_1618 1537071 - 1536499 - | acetyltransferase TERM 1939 1537107 - 1537083 - R 100 -14.3 -3.07443 | opp_overlap 1537081 TCATAGTGTACCCAA GGGGCTGAGAA TTA CTCCCAGCCCC AGATTGTTTCGTTTT SSU05_1619 1538438 - 1537167 - | UDP-N-acetylglucosamine 1-carboxyvinyltransferase TERM 1940 1538518 - 1538541 + r 72 -8.1 -3.52522 | opp_overlap 1538518, overlap 1538514 ATATAGCATGCAAAA GGACCGAGC CAATGA GCTCAGTCC TTCATATTTATATAC TERM 1941 1538541 - 1538518 - R 90 -11 -4.23054 | opp_overlap 1538518 1538514 ATATAGCATGCAAAA GGACCGAGCC AATG AGCTCAGTCC TTCATATTTATATAC SSU05_1620 1539179 - 1538577 - | putative NADPH-quinone reductase (modulator of drug activity B) SSU05_1621 1540413 - 1539223 - | S-adenosylmethionine synthetase TERM 1942 1540496 - 1540476 - R 95 -12.7 -3.93236 | opp_overlap 1540476 1540479, overlap 1540479 TACTAAGGTTACAAA GAACTAGTC AAA GACTAGTTC TTTGCGAAAGACAAC TERM 1943 1540476 - 1540496 + r 95 -12.7 -3.53012 | opp_overlap 1540476 1540479, overlap 1540479 TACTAAGGTTACAAA GAACTAGTC AAA GACTAGTTC TTTGCGAAAGACAAC TERM 1944 1540479 - 1540493 + r 80 -8.6 -3.90744 | opp_overlap 1540476 1540479, overlap 1540476 TAAGGTTACAAAGAA CTAGTC AAA GACTAG TTCTTTGCGAAAGAC TERM 1945 1540493 - 1540479 - R 81 -8.6 -4.08948 | opp_overlap 1540479 1540476, overlap 1540476 TAAGGTTACAAAGAA CTAGTC AAA GACTAG TTCTTTGCGAAAGAC SSU05_1622 1541297 - 1540812 - | deoxycytidylate deaminase SSU05_1623 1542035 - 1541298 - | hypothetical protein SSU05_1624 1543071 - 1542037 - | cellulase M-like protein TERM 1946 1542597 - 1542583 - G 75 -8.6 -3.80573 | overlap 1542588 GGTACGAGGATCAAA GGAGAT AAA ATCTCC GACTTCAATACCTAA TERM 1947 1543100 - 1543114 + H 77 -2.8 -5.59357 | opp_overlap 1543100 TTTAAAACTATTATA TCACGT TTT AGGTGA TTTTTTTGCTATAAT TERM 1948 1543937 - 1543913 - g 100 -9.4 -5.38054 | opp_overlap 1543912 CTTTACAAAGAAAAA TCACTTGTCG TTGGC CAACAAGTGA GCTTTGTAGAAAATC TERM 1949 1544051 - 1544034 - g 73 -3.5 -4.99134 | gap 1, opp_overlap 1544043, overlap 1544035 1544037 ACGGCAAAGCAAAAA TTATCTCC AGC GGAGA-AA TCAGCCTTACTTCTT SSU05_1625 1543136 - 1544092 + | biotin--protein ligase SSU05_1626 1544246 - 1544058 - | ABC-type multidrug transport system, ATPase and permease component TERM 1950 1544267 - 1544284 + r 80 -6.3 -5.06585 | opp_overlap 1544267, overlap 1544261 AGATTATACCAAAAA TTCAGTC AACT GGCTGAA TTTTTATATGCTTTC TERM 1951 1544358 - 1544326 - R 80 -10.1 -3.53444 | opp_overlap 1544334, overlap 1544329 1544334 CGATTCTTTTCTAAA CAAGAAAACACCAAT CTA ATTGATGCTTTCTTA AGGAGATATGAAAAA TERM 1952 1544355 - 1544329 - R 83 -9.6 -3.90744 | opp_overlap 1544334, overlap 1544326 1544334 TTCTTTTCTAAACAA GAAAACACCAAT CTA ATTGATGCTTTC TTAAGGAGATATGAA TERM 1953 1544350 - 1544334 - R 80 -5.9 -5.00196 | opp_overlap 1544334, overlap 1544329 1544326 TTCTAAACAAGAAAA CACCAAT CTA ATTGATG CTTTCTTAAGGAGAT TERM 1954 1544419 - 1544434 + r 74 -7.6 -3.85857 | overlap 1544417 TATCAAAACTATTCA TCAGTC TTAG GACTGA TATTTTCTAATCATT SSU05_1627 1546108 - 1544441 - | DNA polymerase III subunits gamma and tau TERM 1955 1545566 - 1545584 + g 72 -9.6 -3.18452 | CAAGTGCTCCTGAAT GTCCGTCA CCT TGATGGAC TTAAATTCAAATCGT SSU05_1628 1546606 - 1546205 - | GAF domain-containing protein TERM 1956 1546252 - 1546236 - G 76 -7.9 -4.20354 | opp_overlap 1546236 AATCCAAGTCCAAAA CGCCCAG CAA CTGGTCG TTTTTCACCATTGGC TERM 1957 1546236 - 1546252 + g 86 -7.9 -4.62471 | opp_overlap 1546236 AATCCAAGTCCAAAA CGCCCAG CAA CTGGTCG TTTTTCACCATTGGC TERM 1958 1546677 - 1546656 - R 71 -7.3 -3.92075 | opp_overlap 1546660 AGTCCGAGCGATAAA GAAAAAGGC TTGC GCCTATTTC CACATCCAGTACATA SSU05_1629 1546952 - 1546671 - | hypothetical protein TERM 1959 1547027 - 1547008 - R 100 -12.2 -4.96646 | opp_overlap 1547003 1547008 GGACACAAGGAAAAA CGATTCGG AAAT CCGAATCG TTACATTTCTGCCAG TERM 1960 1547008 - 1547027 + r 89 -12.2 -3.32997 | opp_overlap 1547008, overlap 1547003 GGACACAAGGAAAAA CGATTCGG AAAT CCGAATCG TTACATTTCTGCCAG SSU05_1630 1547576 - 1547028 - | transcriptional repressor PadR SSU05_1631 1548204 - 1547569 - | uridine kinase SSU05_1632 1548281 - 1548961 + | dehydrogenase and related proteins SSU05_1633 1549109 - 1549267 + | dehydrogenase and related proteins TERM 1961 1549871 - 1549857 - g 72 -7.2 -3.9712 | opp_overlap 1549856, overlap 1549868 TTATCTGAGCAGAAA TTGGAT AAT ATCCAA CATTGCTATATGATG SSU05_1634 1549257 - 1550339 + | superfamily II DNA/RNA helicase TERM 1962 1550399 - 1550351 - T 93 -12.9 -3.31932 | gap 1, opp_overlap 1550351 1550356, overlap 1550356 ATAATGAACAATATA CAAAAGGCTTAGAACCAGTGTT TCTACT AACA-TGATTCTAAGCCTTTTA TCATTCTTACTGGGC TERM 1963 1550394 - 1550356 - T 100 -10.6 -4.73633 | gap 1, opp_overlap 1550351 1550356, overlap 1550351 GAACAATATACAAAA GGCTTAGAACCAGTGTT TCTACT AACA-TGATTCTAAGCC TTTTATCATTCTTAC TERM 1964 1550356 - 1550394 + T 88 -8.4 -4.61747 | gap 1, opp_overlap 1550356 1550351, overlap 1550351 GAACAATATACAAAA GGCTTAGAACCAGTGTT TCTACT AACA-TGATTCTAAGCC TTTTATCATTCTTAC SSU05_1635 1551821 - 1550406 - | xylanase/chitin deacetylase TERM 1965 1550584 - 1550597 + g 75 -3.1 -5.18866 | AGGATAATACTTCCT GGACA AGTC TGTTC TTTTATTTCTTTCAA TERM 1966 1552085 - 1552070 - R 88 -5.4 -5.45802 | opp_overlap 1552070 1552065 TTTTGAAAAGAAAAA GACTGC CTAG GCAATC TTTTCTAAATTAATC SSU05_1636 1552478 - 1552095 - | lactoylglutathione lyase and related lyases TERM 1967 1552577 - 1552548 - R 86 -10.1 -4.23758 | gap 1, opp_overlap 1552554 ATCCGATATTCAAAA TCATGACCACCCGT CAA ACGGGTGGTT-TGA ACAAGGGCTATAAGC TERM 1968 1552554 - 1552572 + r 100 -14.6 -3.53224 | opp_overlap 1552548 TATTCAAAATCATGA CCACCCGT CAA ACGGGTGG TTTGAACAAGGGCTA TERM 1969 1552594 - 1552582 - R 75 -9.1 -3.61398 | GGGTGGTTTGAACAA GGGCT ATA AGCCC ACATCACCAGCCAGC TERM 1970 1552604 - 1552625 + r 91 -11.5 -3.93262 | opp_overlap 1552601 AAGCCCACATCACCA GCCAGCGCC TAAA GACGCTGGC TTTCACTTTGTTCAA TERM 1971 1552667 - 1552681 + r 73 -10 -2.54687 | overlap 1552666 TTTGACTCGTCACTA GCCTCT TAA AGAGGC ATTCGTACTACTTGC TERM 1972 1552786 - 1552816 + r 83 -9.2 -3.97694 | opp_overlap 1552794, overlap 1552790 1552794 TTAAGCTGAAGCTCG TGAAGAAATCATCC ACT GGATAATTTCTTTA TTCTTGTATATATTT TERM 1973 1552790 - 1552812 + r 84 -7.8 -4.55997 | opp_overlap 1552794, overlap 1552786 1552794 GCTGAAGCTCGTGAA GAAATCATCC ACT GGATAATTTC TTTATTCTTGTATAT SSU05_1637 1553167 - 1552814 - | IS200 family transposase TERM 1974 1553285 - 1553303 + r 91 -10.2 -4.55295 | overlap 1553286 TGTAACCTTCGTCGC GCACCCGC ATA GCGGGTGG TTTATTTGTCACGCA TERM 1975 1553286 - 1553302 + r 100 -13.7 -3.32695 | overlap 1553285 GTAACCTTCGTCGCG CACCCGC ATA GCGGGTG GTTTATTTGTCACGC TERM 1976 1553378 - 1553361 - R 100 -11.3 -5.35354 | opp_overlap 1553360 CACATAACTAAAAAA GCCTGAG CGAA CTCAGGC CTTAAATGAATTATG SSU05_1638 1553958 - 1553389 - | phosphoglycerate mutase 1 TERM 1977 1553777 - 1553787 + g 71 -6.8 -4.15222 | TCACCAAATTCAGCA GCTG CTT CAGC TTTGTTCAAGCCAGT SSU05_1639 1554071 - 1553955 - | hypothetical protein TERM 1978 1554348 - 1554360 + G 73 -9.1 -3.5627 | TGTCTGCCTATCGTT CTGCC ATC GGCAG TTTCGGAGGTAGTCT SSU05_1640 1554314 - 1555498 + | Acetyl-CoA acetyltransferase TERM 1979 1556211 - 1556185 - g 78 -2.4 -5.52023 | gap 1, overlap 1556188 ACTATCAACAAAAAA CAGGCAAAACC CTCAAC GATTTTGC-TG CCATGTGCTTACATA TERM 1980 1556412 - 1556426 + G 74 -6.4 -4.45485 | opp_overlap 1556412 AGAGCGTTAGAGACA GGGGAT CAA ATCCTC TTTTATAGCTATGGT SSU05_1641 1555482 - 1556681 + | 3-hydroxy-3-methylglutaryl CoA synthase TERM 1981 1556704 - 1556684 - f 78 -6.1 -4.88918 | opp_overlap 1556693, overlap 1556679 1556691 1556692 1556693 CTATCGTAAATAAAA GCCAAAACG GCG CCCTTTGGC TCTCACCAAGGGGCG TERM 1982 1556722 - 1556691 - f 76 -6.4 -4.49716 | opp_overlap 1556693, overlap 1556684 1556679 1556692 1556693 AAATAAAAGCCAAAA CGGCGCCCTTTGGC TCTC ACCAAGGGGCGCTT TCCTATAGAAAGAGG TERM 1983 1556721 - 1556692 - f 77 -9.9 -3.27389 | opp_overlap 1556693, overlap 1556684 1556679 1556691 1556693 AATAAAAGCCAAAAC GGCGCCCTTTGGC TCTC ACCAAGGGGCGCT TTCCTATAGAAAGAG TERM 1984 1556693 - 1556720 + F 100 -14.9 -3.83026 | opp_overlap 1556684 1556679 1556693 1556692 1556691 ATAAAAGCCAAAACG GCGCCCTTTGG CTCTCA CCAAGGGGCGC TTTCCTATAGAAAGA TERM 1985 1556720 - 1556693 - f 87 -13.4 -2.54807 | opp_overlap 1556693, overlap 1556684 1556679 1556692 1556691 ATAAAAGCCAAAACG GCGCCCTTTGGC TCTC ACCAAGGGGCGC TTTCCTATAGAAAGA SSU05_1642 1556743 - 1558023 + | hydroxymethylglutaryl-CoA reductase TERM 1986 1558107 - 1558056 - f 90 -8.8 -4.60317 | opp_overlap 1558062 1558066, overlap 1558060 1558066 ACAGAATAATGAAAA CGAACATAAAGCCCTCACTAGG TGTATAAT CTTAGTGAGGGCTTTGTGGTTG ACGAGTTACTGATGT TERM 1987 1558103 - 1558060 - f 95 -12.6 -3.78229 | opp_overlap 1558062 1558066, overlap 1558056 1558066 AATAATGAAAACGAA CATAAAGCCCTCACTAGG TGTATAAT CTTAGTGAGGGCTTTGTG GTTGACGAGTTACTG TERM 1988 1558062 - 1558101 + F 93 -13.8 -2.72379 | opp_overlap 1558060 1558056 1558066, overlap 1558066 TAATGAAAACGAACA TAAAGCCCTCACTAGG TGTATAAT CTTAGTGAGGGCTTTG TGGTTGACGAGTTAC TERM 1989 1558097 - 1558066 - f 86 -10.2 -4.3341 | opp_overlap 1558062 1558066, overlap 1558060 1558056 GAAAACGAACATAAA GCCCTCACTAGG TGTATAAT CTTAGTGAGGGC TTTGTGGTTGACGAG TERM 1990 1558066 - 1558097 + F 93 -12.4 -4.05446 | opp_overlap 1558066 1558060 1558056, overlap 1558062 GAAAACGAACATAAA GCCCTCACTAGG TGTATAAT CTTAGTGAGGGC TTTGTGGTTGACGAG TERM 1991 1559314 - 1559304 - g 75 -5.4 -4.82901 | CGTGGCTCACAAAAA GCAA CCA TTGC ACTTGCGCATCAACT SSU05_1643 1558251 - 1559417 + | transposase TERM 1992 1559422 - 1559398 - T 100 -6.5 -6.26417 | TAGCACAAAAAAAAA GACTACTAG GGACGAG CTAGTAGCC TAACATAAAAAATTT SSU05_1644 1560119 - 1559652 - | histone acetyltransferase HPA2-like acetyltransferase TERM 1993 1560262 - 1560275 + H 80 -2.3 -5.64304 | overlap 1560259 1560251 CTCCTAAAAAATCAG CTGGC CAAG GCTGG TTTTTTGTTGTCTTA TERM 1994 1560427 - 1560465 + H 78 -3.9 -5.40464 | gap 1, opp_overlap 1560416 1560439, overlap 1560449 1560459 1560460 1560463 AACATACTAAGATTA GTAGTGAGGA-AATCTCC GACG GGAGAAAGTACTCACTAC TTTTTCTTTATGATA TERM 1995 1561357 - 1561337 - gH 77 -6.2 -4.63218 | gap 1, opp_overlap 1561337 GTGCCGTCAAGAAAA CCTC-TCCA ATAC TGGAAGAGG TCCGTTACTATACAA SSU05_1645 1560514 - 1561446 + | transposase TERM 1996 1561771 - 1561731 - gT 100 -11.9 -5.05505 | ATGAGAAACGAAAAA GACAATCGCAAACGACTTC AAC GAAGCCGCACACGATTGCC TCCATACATCGTCTC SSU05_1646 1561418 - 1561855 + | transposase TERM 1997 1562074 - 1562038 - T 100 -10.2 -5.70829 | gap 1, opp_overlap 1562038 AATAGTAGAAAAAAA GCCCGTCGGA-CAAGCT AGAA AGCTTGATATGACGGGC TTTTTGATGCTTAGC TERM 1998 1562038 - 1562074 + T 100 -12.4 -4.81083 | gap 1, opp_overlap 1562038 AATAGTAGAAAAAAA GCCCGTCGGA-CAAGCT AGAA AGCTTGATATGACGGGC TTTTTGATGCTTAGC TERM 1999 1562117 - 1562144 + T 86 -10.1 -4.11773 | opp_overlap 1562113 1562122, overlap 1562122 TTTTTAAGCGAGGGA TAAAACAGTCT ATCCCC AGACTGTTTTA TTTTACAGCGTCTTT TERM 2000 1562122 - 1562139 + T 81 -5.6 -5.07652 | opp_overlap 1562113 1562122, overlap 1562117 AAGCGAGGGATAAAA CAGTCT ATCCCC AGACTG TTTTATTTTACAGCG TERM 2001 1562139 - 1562122 - T 73 -6.3 -4.43501 | opp_overlap 1562122 1562117, overlap 1562113 AAGCGAGGGATAAAA CAGTCTA TCCC CAGACTG TTTTATTTTACAGCG SSU05_1647 1562417 - 1562142 - | nucleoid DNA-binding protein TERM 2002 1562374 - 1562387 + g 71 -6.7 -4.14243 | opp_overlap 1562374 TTTTTAGTCAATGAA GTTGC TTCT GCAAC TTTTGCAATCAAATC SSU05_1648 1563103 - 1562507 - | hypothetical protein SSU05_1649 1563938 - 1563075 - | lysophospholipase L1 and related esterases SSU05_1650 1564734 - 1563901 - | hypothetical protein TERM 2003 1564833 - 1564818 - R 78 -5.4 -4.96646 | opp_overlap 1564818, overlap 1564811 1564812 GGACATAAGCAAAAA GGCTAG TCGC CTAACC TTTTTCTACTAATTC TERM 2004 1564818 - 1564833 + r 70 -3.2 -4.94902 | opp_overlap 1564818 1564811 1564812 GGACATAAGCAAAAA GGCTAG TCGC CTAACC TTTTTCTACTAATTC SSU05_1651 1566498 - 1564828 - | ATPase involved in DNA repair TERM 2005 1565395 - 1565370 - G 71 -7 -4.17762 | gap 1, opp_overlap 1565389 TATCTTCTAAAACAA CAGCCAATTCA TGGCG TGA-TTGGCTG AGCTGACCTGCTCGT TERM 2006 1566088 - 1566110 + g 71 -9.2 -2.96042 | opp_overlap 1566085 GGATTTCATCAATTC TTCCTGGTCA TGT TGACCATGAA TATCTACTAAATATT SSU05_1652 1566935 - 1566492 - | arginine repressor SSU05_1653 1567731 - 1566910 - | rRNA methylase TERM 2007 1567296 - 1567283 - GR 73 -6.7 -4.21275 | TCAATGGACGCAAAA CTTGG TTGA CCAAG TTCGAAATCTCCCAA SSU05_1654 1568593 - 1567724 - | geranylgeranyl pyrophosphate synthase TERM 2008 1568203 - 1568188 - G 73 -9 -3.54129 | CAGATGCCTGGGAAA GCTCTC TCAC GAGAGC AAGGATGGTCTCAGC SSU05_1655 1568808 - 1568593 - | exodeoxyribonuclease VII small subunit TERM 2009 1568629 - 1568644 + gr 78 -7.6 -4.22338 | GCCATCCGCCTGCAT GACCTT GACC AAGGTC TTTTCAGCTTCTGCT xseA 1570132 - 1568783 - | exodeoxyribonuclease VII large subunit TERM 2010 1569871 - 1569858 - GH 70 -6.7 -4.01089 | ATGACAATAGAATAA GAACC ATTT GGTTC ATAGAGCTGAATGCG SSU05_1657 1570267 - 1571202 + | metalloprotease SSU05_1658 1571285 - 1571169 - | hypothetical protein TERM 2011 1571268 - 1571226 - G 100 -16.7 -3.14211 | opp_overlap 1571226 1571230 1571234, overlap 1571230 1571234 AGCCTCTCGTAGCAA TAAAGAAACTCTTGCAACA TACAC TTTTGCAAGAGTTTCTTTA TAATATACAACTGAC TERM 2012 1571226 - 1571268 + g 100 -16.7 -2.62983 | opp_overlap 1571226 1571230 1571234, overlap 1571230 1571234 AGCCTCTCGTAGCAA TAAAGAAACTCTTGCAACA TACAC TTTTGCAAGAGTTTCTTTA TAATATACAACTGAC TERM 2013 1571230 - 1571264 + g 100 -13.1 -4.0162 | opp_overlap 1571226 1571230 1571234, overlap 1571226 1571234 TCTCGTAGCAATAAA GAAACTCTTGCAACA TACAC TTTTGCAAGAGTTTC TTTATAATATACAAC TERM 2014 1571264 - 1571230 - G 100 -13.1 -4.24342 | opp_overlap 1571230 1571226 1571234, overlap 1571226 1571234 TCTCGTAGCAATAAA GAAACTCTTGCAACA TACAC TTTTGCAAGAGTTTC TTTATAATATACAAC TERM 2015 1571260 - 1571234 - G 86 -8.1 -4.70887 | opp_overlap 1571234 1571230 1571226, overlap 1571230 1571226 GTAGCAATAAAGAAA CTCTTGCAACA TACAC TTTTGCAAGAG TTTCTTTATAATATA TERM 2016 1571234 - 1571260 + g 86 -8.1 -4.60949 | opp_overlap 1571230 1571226 1571234, overlap 1571230 1571226 GTAGCAATAAAGAAA CTCTTGCAACA TACAC TTTTGCAAGAG TTTCTTTATAATATA SSU05_1659 1572001 - 1571411 - | hypothetical protein TERM 2017 1572071 - 1572126 + r 78 -6.4 -4.65819 | opp_overlap 1572076 1572081, overlap 1572073 1572076 TTTTCCATTTGAGAC TACAATAAAAGAGACCTGTTTTCA AAAATGGA TGAAATCATGTCTCTTTTATAGTC TTTTAGTTTACTTTT TERM 2018 1572073 - 1572124 + r 80 -9 -3.90906 | opp_overlap 1572076 1572081, overlap 1572071 1572076 TTCCATTTGAGACTA CAATAAAAGAGACCTGTTTTCA AAAATGGA TGAAATCATGTCTCTTTTATAG TCTTTTAGTTTACTT TERM 2019 1572121 - 1572076 - R 78 -9.3 -3.47078 | opp_overlap 1572073 1572071 1572076, overlap 1572081 CATTTGAGACTACAA TAAAAGAGACCTGTTTTCA AAAATGGA TGAAATCATGTCTCTTTTA TAGTCTTTTAGTTTA TERM 2020 1572076 - 1572121 + r 74 -9.3 -3.00115 | opp_overlap 1572076 1572081, overlap 1572073 1572071 CATTTGAGACTACAA TAAAAGAGACCTGTTTTCA AAAATGGA TGAAATCATGTCTCTTTTA TAGTCTTTTAGTTTA TERM 2021 1572116 - 1572081 - R 74 -4.8 -4.82819 | opp_overlap 1572076 1572073 1572071, overlap 1572076 GAGACTACAATAAAA GAGACCTGTTTTCA AAAATGGA TGAAATCATGTCTC TTTTATAGTCTTTTA TERM 2022 1572300 - 1572286 - R 80 -8.6 -3.94 | opp_overlap 1572286 TGAAGTTGGAAATAA GGAAAC GGA GTTTCC TCTTACGTCGAAGTA TERM 2023 1572286 - 1572300 + r 70 -8.6 -3.08996 | opp_overlap 1572286 TGAAGTTGGAAATAA GGAAAC GGA GTTTCC TCTTACGTCGAAGTA SSU05_1660 1573738 - 1572350 - | two-component sensor TERM 2024 1572438 - 1572451 + g 77 -4.5 -5.02201 | overlap 1572441 GAAGCATAAAAAGTG TACGG AAAG CCGTG TTTTTCTAATATTTT TERM 2025 1572888 - 1572904 + g 91 -6.6 -5.51402 | AACTCAGATTGTTCC TGCAAG ATTTC CTTGCA TTTTTTTAAATATGT TERM 2026 1573041 - 1573054 + g 70 -8.1 -3.72395 | GACTTCTCCTTCTCA CGTGC CATA GCACG TTCATTTTCCGTTCT SSU05_1661 1574391 - 1573804 - | two-component regulator SSU05_1662 1574603 - 1575325 + | hypothetical protein TERM 2027 1575399 - 1575418 + T 100 -13.6 -4.84146 | CCCTACTAGTCATGA CCACCCGT GAAA ACGGGTGG TTTATTTTGTGTAAT TERM 2028 1575456 - 1575494 + T 83 -7 -4.84914 | gap 1, opp_overlap 1575456, overlap 1575451 AAGAGTGCCAAAAAA CGCATAAAATC-GTGTT GCTAAG AACGTTGATTTTATGCG TTTTATTATATGACT SSU05_1663 1578639 - 1575790 - | methyl-accepting chemotaxis protein TERM 2029 1576167 - 1576179 + g 84 -6.3 -4.99035 | GGGTATCCATTACTT TTGGA ATA TCCAA TTTTTGTGTACCTGC TERM 2030 1579005 - 1578976 - R 85 -9.3 -4.17048 | opp_overlap 1578974 1578973 1578972 CTTTTGGGAAAAGAA TGGGCACCTTGTG TATT CATAAGGTGCCTA AGTCCTTCTGTTAAC SSU05_1664 1581576 - 1579399 - | hypothetical protein TERM 2031 1582086 - 1582073 - R 100 -8.1 -5.88565 | CTCACAATAAAAAAA GCACC CGAA GGTGC TAGGTAAGATCATCC SSU05_1665 1583072 - 1582137 - | putative manganese-dependent inorganic pyrophosphatase TERM 2032 1583440 - 1583430 - H 81 -5.4 -5.21709 | opp_overlap 1583438 TTCTACATTAAAAAA CCAA GTT TTGG GAATAAATTTCCCCC TERM 2033 1583589 - 1583575 - H 75 -7.2 -4.35095 | opp_overlap 1583575 AAAAAAAGTTTAAAA CCTTTT TAT AAAAGG TCATTCCATTTTTGC SSU05_1666 1583601 - 1584908 + | oligoendopeptidase F TERM 2034 1584919 - 1584946 + T 100 -10 -5.35354 | opp_overlap 1584919 TATAAAACACAAAAA TCTGAATGAATC AAAT GACTCATTCAGA TTTTTTGATTATATG TERM 2035 1584946 - 1584919 - T 100 -12.2 -5.32599 | opp_overlap 1584919 TATAAAACACAAAAA TCTGAATGAATC AAAT GACTCATTCAGA TTTTTTGATTATATG SSU05_1667 1585809 - 1585018 - | pyruvate-formate lyase activating enzyme TERM 2036 1585100 - 1585114 + g 70 -9.2 -2.80935 | overlap 1585091 ACTCGAGCCTTCGTT GGGGGC TTG GTCCCC TCTAGTGGATAGGGT TERM 2037 1585941 - 1585911 - R 81 -4.1 -5.4505 | gap 1, opp_overlap 1585917 1585918 1585920, overlap 1585918 TTCCGCAAGAAAAAA GCTAAAAGACTAGG TTGC CCTAGTC-CTTATC GGTTTCTTCTTTCTC TERM 2038 1585918 - 1585935 + r 74 -9.9 -2.70617 | opp_overlap 1585911 1585918, overlap 1585917 1585920 AGAAAAAAGCTAAAA GACTAGG TTGC CCTAGTC CTTATCGGTTTCTTC TERM 2039 1585935 - 1585918 - R 91 -9.9 -4.55016 | opp_overlap 1585918 1585917 1585920, overlap 1585911 AGAAAAAAGCTAAAA GACTAGG TTGC CCTAGTC CTTATCGGTTTCTTC SSU05_1668 1587267 - 1585930 - | hemolysin-like protein TERM 2040 1586852 - 1586832 - G 86 -9.1 -4.4078 | TTTTTCCAAGGAAAA TAATCACTG GTG CAGTGACTA CTGCCAGATTTTCCT SSU05_1669 1587400 - 1588179 + | ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA TERM 2041 1588213 - 1588184 - T 100 -9.4 -5.34555 | opp_overlap 1588188, overlap 1588188 CGATATTATAAAAAA CAAATCCAGCTC TAGTTC GAGCTGGATTTT AATCGTTCCACCATG TERM 2042 1588188 - 1588209 + T 86 -10.2 -4.3534 | opp_overlap 1588184 1588188 ATTATAAAAAACAAA TCCAGCTC TAGTTC GAGCTGGA TTTTAATCGTTCCAC TERM 2043 1588209 - 1588188 - T 100 -10.2 -5.1471 | opp_overlap 1588188, overlap 1588184 ATTATAAAAAACAAA TCCAGCTC TAGTTC GAGCTGGA TTTTAATCGTTCCAC SSU05_1670 1588749 - 1588195 - | SAM-dependent methyltransferase SSU05_1671 1588871 - 1589515 + | Type II secretory pathway, prepilin signal peptidase PulO and related peptidases TERM 2044 1589517 - 1589531 + F 91 -5.7 -5.89921 | opp_overlap 1589517 TTCTGTGCACCTAAA TCGAG TTTTT CTCGA TTTTTTTGTTATAAT SSU05_1672 1589623 - 1591083 + | nicotinate phosphoribosyltransferase nadE 1591096 - 1591920 + | NAD synthetase TERM 2045 1591965 - 1591995 + T 80 -11.2 -3.15354 | opp_overlap 1591974 1591975, overlap 1591963 1591974 1591994 TTGACTTGATTTGAT GACTGAAAAGCTCC TGT GGAGGTTTTCAGCC TGTTCCCTTGAAATA TERM 2046 1592079 - 1592093 + T 75 -7.2 -4.25104 | ATTTCCTAGCTTCAA CTATCT CCC AGATAG TTTTGATGCGAAACA TERM 2047 1592122 - 1592160 + T 79 -10.4 -3.25595 | overlap 1592120 1592119 1592123 CATGTTCGCTATATT TCCAACCTTCAACTATCT CCC AGATAGTTGAAGCTAGGC TACTTTTGATTTTCA TERM 2048 1592123 - 1592159 + T 91 -13.9 -2.54272 | overlap 1592122 1592120 1592119 ATGTTCGCTATATTT CCAACCTTCAACTATCT CCC AGATAGTTGAAGCTAGG CTACTTTTGATTTTC TERM 2049 1592219 - 1592195 - T 78 -10.7 -3.00342 | opp_overlap 1592195 1592196, overlap 1592192 ATAATAAAAAATGGA GCCCTGACAGT TGA ACCGTCAGGGG TTTTGTTTTTTATTA TERM 2050 1592195 - 1592219 + T 100 -8.5 -5.55001 | opp_overlap 1592195 1592192, overlap 1592196 ATAATAAAAAATGGA GCCCTGACAGT TGA ACCGTCAGGGG TTTTGTTTTTTATTA TERM 2051 1592196 - 1592218 + T 93 -12 -3.8934 | opp_overlap 1592195 1592192, overlap 1592195 TAATAAAAAATGGAG CCCTGACAGT TGA ACCGTCAGGG GTTTTGTTTTTTATT TERM 2052 1592289 - 1592259 - T 100 -19.8 -5.33848 | ACCATAATGAAAAAA GCCCACGCAGGAAA AAA TATCCTGCGTGGGC GTCAATGGACACGGT TERM 2053 1592687 - 1592669 - T 76 -3.1 -5.30199 | overlap 1592663 AAAAACTAACAAAAA GCCACTC TGCTT AAGTGAC TTTCTAAAAAACTGT TERM 2054 1592708 - 1592733 + T 76 -10.3 -2.59921 | overlap 1592707 AAAAAACTGTACTCA CGAGGCTGGGC TCAA GCCCAGCACCG CTTCTCAAAGTTAGT TERM 2055 1592816 - 1592802 - T 78 -8.6 -3.65902 | opp_overlap 1592802 TCCAGTGGAGTGAAA CAGTTC GGG GAACTG TTTCAGCCCGATCCT TERM 2056 1592802 - 1592816 + T 75 -8.6 -3.5393 | opp_overlap 1592802 TCCAGTGGAGTGAAA CAGTTC GGG GAACTG TTTCAGCCCGATCCT TERM 2057 1592883 - 1592867 - T 78 -9.5 -3.49668 | opp_overlap 1592861 AAAGGTTGGAGATAA GATTTGC GAA GCAAATC TCAGCAATTCATGTT TERM 2058 1592930 - 1592944 + T 76 -10 -2.9914 | ACCTCTACGACTGAT GCGAAC TTT GTTCGC TATATCTCCAGCCTC SSU05_1674 1593743 - 1593216 - | glycopeptide antibiotics resistance protein TERM 2059 1593688 - 1593647 - G 95 -9.5 -4.49556 | overlap 1593653 1593656 GTGGTAGGAAACAAA GTAAAACAATAGCCAGAGC ATAG GCTCCAGCTAAGGTCTTAC AAATCTGTCTTCCCA TERM 2060 1593682 - 1593653 - G 71 -4.9 -4.72863 | overlap 1593647 1593656 GGAAACAAAGTAAAA CAATAGCCAGAGC ATAG GCTCCAGCTAAGG TCTTACAAATCTGTC TERM 2061 1593679 - 1593656 - G 95 -9.6 -4.42237 | overlap 1593653 1593647 AACAAAGTAAAACAA TAGCCAGAGC ATAG GCTCCAGCTA AGGTCTTACAAATCT SSU05_1676 1594162 - 1593740 - | Fe-S-cluster redox protein SSU05_1677 1594853 - 1594227 - | Fe-S-cluster redox protein SSU05_1675 1594155 - 1594802 + | hypothetical protein SSU05_1678 1595503 - 1594862 - | hypothetical protein TERM 2062 1595479 - 1595490 + g 75 -3 -5.14819 | opp_overlap 1595479 TATTATAGTTATACA TTTC AGGT GAAA TTTCTTTTTTCATTT TERM 2063 1595700 - 1595684 - R 83 -5.8 -5.14563 | opp_overlap 1595684 TTCTCTAGCAAAAAA GGACGA TTTAC TCGCCC TTTGTTTTCTTCAAA SSU05_1679 1596677 - 1595691 - | protease TERM 2064 1596377 - 1596393 + g 77 -10.9 -2.73735 | TGACTTCTTTTCCTG CCAAGGT CAA ACCTTGG TACTTCGCCATATTT coaD 1597216 - 1596728 - | phosphopantetheine adenylyltransferase SSU05_1681 1597745 - 1597206 - | hypothetical protein SSU05_1682 1598775 - 1598053 - | extracellular serine protease SSU05_1683 1599221 - 1598832 - | rhodanese-related sulfurtransferase SSU05_1684 1599493 - 1599218 - | hypothetical protein TERM 2065 1599630 - 1599616 - R 87 -11.4 -3.6106 | opp_overlap 1599616 GGGAACAGGCTGAAA GGCTCC ACT GGAGCC TTTTACTCATCAAAT TERM 2066 1599616 - 1599630 + r 91 -11.4 -4.30844 | opp_overlap 1599616 GGGAACAGGCTGAAA GGCTCC ACT GGAGCC TTTTACTCATCAAAT TERM 2067 1599735 - 1599716 - R 100 -8.6 -4.82901 | opp_overlap 1599716 1599718 TCCGGTCTATAAAAA GATTGGAC AAAT GCCCAATC TCATTCGTTTATACT SSU05_1685 1600346 - 1599744 - | response regulator SSU05_1686 1601437 - 1600343 - | putative sensor histidine kinase SSU05_1687 1602177 - 1601446 - | hypothetical protein TERM 2068 1601992 - 1601982 - G 79 -8.2 -4.24002 | TGGGAAAGGTGAAAA GGGC AAA GCCC GACATGGAAAAACCT SSU05_1688 1603052 - 1602174 - | putative ATPase TERM 2069 1603403 - 1603386 - R 88 -4.8 -5.54894 | opp_overlap 1603386 AATGTAGCAAAAAAA GAGTCC TACTGT GGACCC TTCATCTATTTACAA SSU05_1689 1603931 - 1603413 - | Dpr TERM 2070 1604158 - 1604148 - g 78 -4 -5.19328 | ATGTCAGAAGAAAAA TTTG ACG CAAA ACTAGAACAGCTATC SSU05_1690 1604076 - 1604345 + | MF3-like protein TERM 2071 1604446 - 1604487 + G 70 -3.9 -4.84311 | opp_overlap 1604460, overlap 1604485 AACAAAAATATGCAA GAGAGGGGA-ACTCAGACA TTTACC TGTC-GAGTCTACCTTCTC TTTTCTTATGTCACG SSU05_1691 1604440 - 1604949 + | putative phosphotyrosine protein phosphatase TERM 2072 1605420 - 1605410 - g 91 -8.2 -4.74103 | CGGGCAATTTAAAAA CGGC TAT GCCG ATGGAAAAGGAAAAT SSU05_1692 1605081 - 1605503 + | hypothetical protein TERM 2073 1607238 - 1607224 - g 71 -10 -2.6342 | overlap 1607220 CTTGAAAGCAATGGA GGCGAA GTC TTCGCC CAAACGATAAAAAAT SSU05_1693 1605493 - 1607292 + | acyltransferase TERM 2074 1607308 - 1607330 + T 100 -12.8 -4.61527 | opp_overlap 1607305 ATTTATACATCATCA TCCTCTGAGA ATT TCTCGGAGGA TTTTTGCACGATTTT TERM 2075 1607503 - 1607482 - T 93 -6.6 -5.55698 | opp_overlap 1607482 GACAAGTTAAAAAAA CTCCTACC TTTTAC AGTAGGAG TTGGTGTCAAATTGA SSU05_1694 1608172 - 1607519 - | membrane-associated phospholipid phosphatase TERM 2076 1608181 - 1608202 + rH 70 -5.3 -4.44046 | gap 1, opp_overlap 1608181 TCTTCATACAGTATA GTTT-ACCTT ATA AAGGTTAAAC TTTCTTTAAAATAGG SSU05_1696 1608802 - 1608197 - | hypothetical protein TERM 2077 1608721 - 1608735 + gH 73 -6.4 -4.29981 | opp_overlap 1608721 ATACTGCTGAGAGAA TGGCGA TAA TCGTCA TTTTGCGTGTGTTTG SSU05_1695 1608787 - 1608906 + | hypothetical protein TERM 2078 1609062 - 1609044 - TR 75 -5.3 -4.7173 | gap 1, opp_overlap 1609044, overlap 1609045 1609046 CATCATACCTAAAAA GC-CTTGC ATTT GCAAGAGC TTGGTAAGTTTTCAC SSU05_1697 1609455 - 1609078 - | rRNA methyltransferase SSU05_1698 1609622 - 1609452 - | hypothetical protein TERM 2079 1609843 - 1609862 + r 74 -9.4 -3.05384 | opp_overlap 1609841, overlap 1609844 TCAGCAAACAGCATG GTGAATGA TGAT TCATTCAC TTAACTCACAACAGG TERM 2080 1610055 - 1610069 + r 78 -10 -3.36273 | ATTGATTGGCTTTTA CAGTCC AGT GGACTG TTAATATTGAGGCGA TERM 2081 1610194 - 1610181 - R 91 -6.7 -5.27206 | opp_overlap 1610181 TATACAGAACAAAAA GTAGG TTGC CCTAC TTCTGCTTATTTCTT SSU05_1699 1611161 - 1610430 - | 16S rRNA uridine-516 pseudouridylate synthase family protein scpB 1611726 - 1611151 - | segregation and condensation protein B scpA 1612423 - 1611704 - | segregation and condensation protein A xerD 1613154 - 1612423 - | site-specific tyrosine recombinase XerD-like protein SSU05_1703 1613609 - 1613151 - | CBS domain-containing protein SSU05_1704 1614133 - 1613606 - | phosphoesterase SSU05_1705 1615116 - 1614106 - | fused deoxyribonucleotide triphosphate pyrophosphatase/unknown domain-containing protein SSU05_1706 1615907 - 1615113 - | glutamate racemase TERM 2082 1615937 - 1615919 - R 70 -8.2 -3.43961 | opp_overlap 1615918 CCATAATACTGAGAA TAGCCAGA AAA TCTGACTA GCCTTTCTTTTCTAC TERM 2083 1615990 - 1615961 - R 100 -8.7 -5.08824 | gap 1, opp_overlap 1615961 1615967 TTTCTACTCAAAAAA TGGGATCTGGGA ATGAATA TCCCAG-TCCCA GTTTGATTATTTTTT TERM 2084 1615961 - 1615990 + r 71 -8.7 -3.15181 | gap 1, opp_overlap 1615961, overlap 1615967 TTTCTACTCAAAAAA TGGGATCTGGGA ATGAATA TCCCAG-TCCCA GTTTGATTATTTTTT SSU05_1707 1616233 - 1615997 - | hypothetical protein TERM 2085 1616271 - 1616287 + r 74 -8.1 -3.65529 | AAAAAGTATACTTCT GATTGTT TTT AACAATC TTTCAATAACCCTAT SSU05_1708 1617580 - 1616333 - | putative diaminopimelate decarboxylase TERM 2086 1617476 - 1617493 + g 75 -5.5 -4.77036 | opp_overlap 1617469, overlap 1617469 TGCATTAAGGGCACG GGCCTTC TCAC GAATGCC TTTTTCATCATACAA TERM 2087 1618300 - 1618290 - g 71 -6.8 -4.07885 | opp_overlap 1618278 1618277 GACCTCCTTGCAAAA GGAG CTT CTCC GGAAGAGGTTCAAAC TERM 2088 1618338 - 1618328 - g 84 -5.4 -5.40873 | AACACAAAAAGAAAA CTTG CTT CAAG AAATCTTTAACTTCC SSU05_1709 1617714 - 1619045 + | cysteine aminopeptidase C TERM 2089 1619047 - 1619093 + T 78 -9.7 -3.3382 | opp_overlap 1619050 1619051 1619064, overlap 1619050 1619055 1619057 1619064 GAGCTCTAGCATAAC AAACGACATATAAAAAAGAGG TAAAT CCTCTTTTTTATATGTCATAA TTAGTCTCTACTCAA TERM 2090 1619050 - 1619090 + T 100 -15.8 -2.83613 | opp_overlap 1619050 1619051 1619064, overlap 1619047 1619055 1619057 1619064 CTCTAGCATAACAAA CGACATATAAAAAAGAGG TAAAT CCTCTTTTTTATATGTCA TAATTAGTCTCTACT TERM 2091 1619090 - 1619050 - T 100 -18 -4.35483 | opp_overlap 1619050 1619047 1619055 1619057 1619064, overlap 1619051 1619064 CTCTAGCATAACAAA CGACATATAAAAAAGAGG TAAAT CCTCTTTTTTATATGTCA TAATTAGTCTCTACT TERM 2092 1619089 - 1619051 - T 100 -19.3 -3.20808 | opp_overlap 1619050 1619047 1619055 1619057 1619064, overlap 1619050 1619064 TCTAGCATAACAAAC GACATATAAAAAAGAGG TAAAT CCTCTTTTTTATATGTC ATAATTAGTCTCTAC TERM 2093 1619055 - 1619085 + T 86 -12.9 -2.87404 | opp_overlap 1619051 1619050 1619064, overlap 1619050 1619047 1619057 1619064 GCATAACAAACGACA TATAAAAAAGAGG TAAAT CCTCTTTTTTATA TGTCATAATTAGTCT TERM 2094 1619057 - 1619083 + T 79 -11.1 -2.98282 | opp_overlap 1619051 1619050 1619064, overlap 1619055 1619050 1619047 1619064 ATAACAAACGACATA TAAAAAAGAGG TAAAT CCTCTTTTTTA TATGTCATAATTAGT TERM 2095 1619064 - 1619076 + T 88 -4.8 -5.43414 | opp_overlap 1619051 1619050 1619064, overlap 1619057 1619055 1619050 1619047 ACGACATATAAAAAA GAGG TAAAT CCTC TTTTTTATATGTCAT TERM 2096 1619076 - 1619064 - T 88 -4.8 -5.43414 | opp_overlap 1619064 1619057 1619055 1619050 1619047, overlap 1619051 1619050 ACGACATATAAAAAA GAGG TAAAT CCTC TTTTTTATATGTCAT SSU05_1710 1619795 - 1619094 - | putative integral membrane protein SSU05_1711 1620299 - 1619817 - | hypothetical protein SSU05_1713 1621086 - 1620346 - | rRNA methylase TERM 2097 1620723 - 1620707 - GH 73 -6.5 -4.28018 | overlap 1620708 AATACTCCATCAAAA CCAGCTG CAT CAGCTGT ACGAATCATTGTCCC TERM 2098 1620722 - 1620708 - GH 77 -10 -3.16088 | overlap 1620707 ATACTCCATCAAAAC CAGCTG CAT CAGCTG TACGAATCATTGTCC SSU05_1712 1621085 - 1621183 + | hypothetical protein TERM 2099 1621383 - 1621369 - g 71 -10 -2.7094 | opp_overlap 1621369 1621368 1621368, overlap 1621368 GCTCAGTCAGATAAT GCTGAG AAG CTCAGC CATTTTATCCATGAA TERM 2100 1621369 - 1621383 + G 70 -10 -2.54745 | opp_overlap 1621368 1621369, overlap 1621368 1621368 GCTCAGTCAGATAAT GCTGAG AAG CTCAGC CATTTTATCCATGAA SSU05_1714 1621192 - 1621497 + | acylphosphatase SSU05_1715 1621501 - 1622481 + | preprotein translocase subunit YidC TERM 2101 1622489 - 1622511 + T 100 -10.7 -4.84311 | opp_overlap 1622488 1622487 CTAGATAAAAAATCG CAACCATCT ATTTC AGATGGTTG TTTTCTTATATAGAC TERM 2102 1622671 - 1622650 - T 100 -9.5 -4.96848 | TTGTCTATACAAAAA GAGAGAATC TTTC GACTCTCTC CACACCTTATTTCGT greA 1623160 - 1622678 - | transcription elongation factor GreA TERM 2103 1622722 - 1622754 + g 100 -8.5 -5.42259 | overlap 1622719 TTACATCATAGCTAC CAGCAGGTGTTTCAA TTG TTGCAACATCTCCTG TTTTTTTACCAATCA TERM 2104 1623194 - 1623223 + r 100 -15.3 -4.17491 | opp_overlap 1623194 1623199, overlap 1623199 TATTTTTCATGAAAA CAAAATTATGTGG AAAA CCACATAATTTTG TTTTAAGAATTTACT TERM 2105 1623223 - 1623194 - R 100 -15.3 -4.2558 | opp_overlap 1623194 1623199, overlap 1623199 TATTTTTCATGAAAA CAAAATTATGTGG AAAA CCACATAATTTTG TTTTAAGAATTTACT TERM 2106 1623218 - 1623199 - R 100 -9.4 -5.13722 | opp_overlap 1623194 1623199, overlap 1623194 TTCATGAAAACAAAA TTATGTGG AAAA CCACATAA TTTTGTTTTAAGAAT TERM 2107 1623199 - 1623218 + r 100 -9.4 -5.08255 | opp_overlap 1623199 1623194, overlap 1623194 TTCATGAAAACAAAA TTATGTGG AAAA CCACATAA TTTTGTTTTAAGAAT SSU05_1717 1624331 - 1623234 - | periplasmic solute-binding protein SSU05_1718 1625052 - 1624372 - | periplasmic solute-binding protein TERM 2108 1624862 - 1624878 + g 74 -4.3 -5.06414 | ACTTTTACAATTTCA GTCTCTC TAT GGGGGGC TTTTTCTTCGGCAAG SSU05_1719 1625717 - 1625124 - | histone acetyltransferase HPA2-like acetyltransferase TERM 2109 1625631 - 1625661 + gr 100 -10.4 -5.08088 | opp_overlap 1625637 CTCCCTTATATAGCG GAAAAACAGGGGCC ATA GGCCTCCGTCTTTC TTTTTATTGGACGTT TERM 2110 1625655 - 1625637 - GR 86 -8 -4.65838 | opp_overlap 1625631 TATATAGCGGAAAAA CAGGGGCC ATA GGCCTCCG TCTTTCTTTTTATTG murC 1626996 - 1625665 - | UDP-N-acetylmuramate--L-alanine ligase TERM 2111 1626368 - 1626397 + gr 79 -3 -5.32565 | gap 1 GTGATACGACGAAGT TGCTCATCTTC ACCAAAAAC GAAGA-GAGCA TTTTTTACTTGCTTC SSU05_1721 1627660 - 1626998 - | hypothetical protein SSU05_1722 1630852 - 1627739 - | SNF2 family DNA/RNA helicase TERM 2112 1628397 - 1628410 + g 71 -2.4 -5.17744 | ATTTGTTGAAGCTGG GCTA GGTAGA TAGC TTTTTGTTCATCTGT TERM 2113 1630543 - 1630533 - G 71 -6.8 -4.18908 | opp_overlap 1630532, overlap 1630521 AGACCGCCAAAATAA GTCC GAC GGAC GGTTTCCTTATGTTG SSU05_1723 1631042 - 1630914 - | hypothetical protein TERM 2114 1630966 - 1630947 - GR 85 -5.7 -5.17353 | opp_overlap 1630947 ATAGGTATCAAAAAA CACCAGC AGGTAA ACTGGTG TCTCTAATGAATAGC SSU05_1724 1631278 - 1630970 - | hypothetical protein SSU05_1725 1631618 - 1631280 - | major facilitator superfamily permease TERM 2115 1631684 - 1631673 - R 91 -5.8 -5.63517 | opp_overlap 1631673, overlap 1631666 GGTGCAAAGAAAAAA GAGG TTGC CCTC TTTATTTCCGTTTCC TERM 2116 1631673 - 1631684 + r 73 -5.8 -4.53439 | opp_overlap 1631666 1631673 GGTGCAAAGAAAAAA GAGG TTGC CCTC TTTATTTCCGTTTCC engA 1632996 - 1631686 - | GTP-binding protein EngA SSU05_1727 1633539 - 1633015 - | nitroreductase SSU05_1728 1634623 - 1633724 - | primosomal protein DnaI TERM 2117 1634017 - 1634033 + g 89 -6.5 -5.36441 | opp_overlap 1634018, overlap 1634018 TCCGCTCCTTGACAG AGCCATC TTT GATGGCA TTTTTTATATCGACA TERM 2118 1634018 - 1634032 + g 84 -10 -3.81141 | opp_overlap 1634018, overlap 1634017 CCGCTCCTTGACAGA GCCATC TTT GATGGC ATTTTTTATATCGAC TERM 2119 1634032 - 1634018 - G 72 -10 -2.87132 | opp_overlap 1634018 1634017 CCGCTCCTTGACAGA GCCATC TTT GATGGC ATTTTTTATATCGAC SSU05_1729 1635774 - 1634623 - | replication initiation/membrane attachment protein TERM 2120 1635693 - 1635683 - G 74 -6.8 -4.30978 | GCTAATGCATCAAAA CCGA TAA TCGG CTGGTAGCATTTGCT SSU05_1730 1636252 - 1635761 - | transcriptional regulator NrdR TERM 2121 1636335 - 1636313 - R 100 -8.5 -5.3658 | ATGACAAAAATAAAA GAAAGCGAG AATTA CTCACTTTC TACCAATAATTCATC SSU05_1731 1637454 - 1636324 - | permease TERM 2122 1636690 - 1636674 - G 83 -8.7 -4.1899 | overlap 1636676 GGACCCCAGCCAAAA TACCAGC CAT GCTGGCA TAAGGAATTCCTGAG TERM 2123 1636688 - 1636676 - G 75 -9.1 -3.69483 | overlap 1636674 ACCCCAGCCAAAATA CCAGC CAT GCTGG CATAAGGAATTCCTG TERM 2124 1637242 - 1637258 + g 86 -6.7 -5.03715 | opp_overlap 1637255 CAAAGACCGCTTGGA TTTCTTT AAA AAAGAAA TTTTTTCAAACTGAT TERM 2125 1637265 - 1637255 - G 74 -4 -5.0133 | opp_overlap 1637242 GATTTCTTTAAAAAA GAAA TTT TTTC AAACTGATCTTCTAA TERM 2126 1637529 - 1637513 - R 100 -10.9 -5.01422 | opp_overlap 1637512 1637515 TTATAGAAAAAGAAA GAGGGAA AGC TTCCCTC CTCTCTACTCTAAAT SSU05_1732 1638233 - 1637544 - | response regulator TERM 2127 1638283 - 1638317 + r 82 -8 -4.44548 | gap 1, opp_overlap 1638292, overlap 1638289 GAATCGTATTATGAC TAGAA-AGAAGGGCG CTTCCA CGCCCATCTTTTCTA TTTTGATTCGCTATA TERM 2128 1638289 - 1638310 + r 85 -7.2 -4.93333 | opp_overlap 1638292, overlap 1638283 TATTATGACTAGAAA GAAGGGCG CTTCCA CGCCCATC TTTTCTATTTTGATT TERM 2129 1638307 - 1638292 - R 79 -8.2 -4.12254 | opp_overlap 1638289 1638283 TATGACTAGAAAGAA GGGCGC TTCC ACGCCC ATCTTTTCTATTTTG SSU05_1733 1639061 - 1638315 - | 6-phosphogluconate dehydrogenase TERM 2130 1638671 - 1638690 + g 71 -2.1 -5.14626 | TTTTTGCGATTTCAC CAAATGG CAAGTT CCAGTTG TTTTCTTTTGATGCT SSU05_1734 1639231 - 1639046 - | 6-phosphogluconate dehydrogenase SSU05_1735 1639740 - 1639228 - | 6-phosphogluconate dehydrogenase SSU05_1736 1640376 - 1639837 - | hypothetical protein SSU05_1737 1641303 - 1640386 - | hypothetical protein SSU05_1738 1641541 - 1641317 - | hypothetical protein SSU05_1739 1642902 - 1641559 - | superfamily II DNA/RNA helicase TERM 2131 1642977 - 1642962 - R 100 -10.4 -4.93365 | GTGGACAAGCAAAAA GGACGG ATAC CCGTCC TAATCAACTCTCACT SSU05_1740 1643814 - 1642981 - | ABC-type uncharacterized transport system, ATPase component TERM 2132 1643896 - 1643883 - R 93 -6.7 -5.53288 | opp_overlap 1643883 GTCAAGGTAAAAAAA CAGCA TTTC TGCTG TTTCTGACATTTTAT mraY 1644906 - 1643908 - | phospho-N-acetylmuramoyl-pentapeptide-transferase SSU05_1742 1647157 - 1644908 - | cell division protein FtsI/penicillin-binding protein 2 TERM 2133 1647059 - 1647047 - G 91 -5.5 -5.69068 | opp_overlap 1647056, overlap 1647055 TAAAAAGAGAAAAAA GACGA AAA CCGTC AAAAGAAGTAGGCTC SSU05_1743 1647480 - 1647157 - | protein required for the initiation of cell division mraW 1648462 - 1647491 - | S-adenosyl-methyltransferase MraW TERM 2134 1647850 - 1647891 + g 72 -7.3 -3.96483 | overlap 1647851 1647853 TCTTCTTAAGTTCCT TGGCTGGCTTGGCAGATTT GATC AGCTCTGCCAACTCAGTCG TTGTTTCAATCGGCT TERM 2135 1648493 - 1648470 - H 73 -5.5 -4.63479 | overlap 1648477 1648487 1648488 TACCACAAATTAAAA TAAAAAGTT GTTGCA AACTTTTTA CAAAAAAACTGTCAA TERM 2136 1648521 - 1648502 - H 81 -2.9 -5.60993 | overlap 1648503 CTTTTTACAAAAAAA CTGTCAA ATATAG TTGACAA CTTATATGAACAGGT TERM 2137 1648659 - 1648643 - H 76 -6.6 -4.37734 | opp_overlap 1648643 1648641 1648638 GACAACAATTTAAAA GGATAG TCAAC CTATCC TCTCATTTTTAGCCA SSU05_1745 1648712 - 1648900 + | transcriptional regulator SSU05_1746 1648911 - 1649444 + | hemolysin-like protein SSU05_1747 1649459 - 1649659 + | hypothetical protein SSU05_1748 1649670 - 1650752 + | hypothetical protein TERM 2138 1650951 - 1650939 - g 76 -2.7 -5.35721 | overlap 1650940 ACAGAAGAAGAAAAA CGATA CTT TATCA TTCAAGCCATCTTTG SSU05_1749 1650765 - 1651109 + | major facilitator superfamily permease SSU05_1750 1651099 - 1651446 + | hypothetical protein SSU05_1751 1651493 - 1651927 + | hypothetical protein TERM 2139 1652006 - 1651992 - T 86 -10 -4.0371 | GAGGTTGGAGATAAA GCGAAC AAA GTTCGC ATCAAAAGCCGCAGG SSU05_1752 1653213 - 1652080 - | 1,4-dihydroxy-2-naphthoate octaprenyltransferase TERM 2140 1652229 - 1652198 - GT 70 -5.2 -4.41114 | opp_overlap 1652201 1652214, overlap 1652201 TGACGATATAACAAA GAAGACACAGCC TGATGAAC GACTGTGTCTTT CCTTTTTAGAAAATA TERM 2141 1652226 - 1652201 - GT 75 -6.9 -4.30793 | opp_overlap 1652201 1652214, overlap 1652198 CGATATAACAAAGAA GACACAGCC TGATGAAC GACTGTGTC TTTCCTTTTTAGAAA SSU05_1753 1654276 - 1653185 - | thiamine biosynthesis lipoprotein TERM 2142 1654263 - 1654293 + gr 81 -6.9 -4.61199 | opp_overlap 1654260 1654263 CCCCAAAAATAAGAA GACACAGTAGC CAAACAAGT GCGACTGTGTC TTTTCTGTATAGACT TERM 2143 1654293 - 1654263 - GR 75 -6.9 -4.31587 | opp_overlap 1654263, overlap 1654260 CCCCAAAAATAAGAA GACACAGTAGC CAAACAAGT GCGACTGTGTC TTTTCTGTATAGACT SSU05_1754 1654791 - 1654312 - | major membrane immunogen, membrane-anchored lipoprotein SSU05_1755 1655376 - 1654870 - | geranylgeranyl pyrophosphate synthase SSU05_1756 1655867 - 1655373 - | geranylgeranyl pyrophosphate synthase TERM 2144 1655782 - 1655807 + g 72 -6.2 -4.28254 | overlap 1655783 ACTGCTGGATGCAGG ACCATCATCT CAGATA AGATGATGGA TTTTACCTCTTCAAG TERM 2145 1655783 - 1655806 + g 74 -9.7 -3.1647 | overlap 1655782 CTGCTGGATGCAGGA CCATCATCT CAGATA AGATGATGG ATTTTACCTCTTCAA SSU05_1757 1657675 - 1655867 - | NADH dehydrogenase, FAD-containing subunit SSU05_1758 1657960 - 1658499 + | hypothetical protein TERM 2146 1658498 - 1658526 + F 74 -4.6 -4.91109 | opp_overlap 1658492 1658501, overlap 1658501 TAGCAGAATGGAAAT AAATCTCCCTAG GTCAA CTAAGGAGATTC TTTTTATGGTCCGCA TERM 2147 1658523 - 1658501 - f 86 -8.5 -4.51765 | opp_overlap 1658498 1658501, overlap 1658492 CAGAATGGAAATAAA TCTCCCTAG GTCAA CTAAGGAGA TTCTTTTTATGGTCC TERM 2148 1658501 - 1658523 + F 76 -6.3 -4.56153 | opp_overlap 1658492 1658501, overlap 1658498 CAGAATGGAAATAAA TCTCCCTAG GTCAA CTAAGGAGA TTCTTTTTATGGTCC TERM 2149 1659430 - 1659420 - g 73 -5.4 -4.60924 | CAAATCGGGCAAAAA CGTA GCC TACG AAAACTAGGGTTCCA SSU05_1759 1658745 - 1660112 + | Trk family potassium uptake protein TERM 2150 1660220 - 1660198 - g 71 -9.2 -2.91736 | overlap 1660195 1660190 AACATTACACAATTA CGATTGCAAT ATC ATTGCTATCG ATAATCATGAGCAAC SSU05_1760 1660124 - 1660789 + | K+ transport system, NAD-binding component TERM 2151 1660848 - 1660814 - f 84 -10.1 -3.64947 | opp_overlap 1660825, overlap 1660812 1660817 AAAATCAAAAACAGA CTAGCTCCAAAGGTT TGGGG AACCTTTGGAGGTTG GAGATAGGGCGAACG TERM 2152 1660845 - 1660817 - f 77 -10.4 -2.90234 | opp_overlap 1660825, overlap 1660814 1660812 ATCAAAAACAGACTA GCTCCAAAGGTT TGGGG AACCTTTGGAGG TTGGAGATAGGGCGA TERM 2153 1660951 - 1660921 - f 90 -12.6 -3.14878 | opp_overlap 1660929, overlap 1660929 TGTTTCAAGGTAACA GGCTGAAAGGCTCC ACT GGAGCCTTTCACTC ATCAAATCAAGTCAA TERM 2154 1660943 - 1660929 - f 87 -11.4 -3.6106 | opp_overlap 1660929, overlap 1660921 GGTAACAGGCTGAAA GGCTCC ACT GGAGCC TTTCACTCATCAAAT TERM 2155 1660929 - 1660943 + F 91 -11.4 -3.68529 | opp_overlap 1660929 1660921 GGTAACAGGCTGAAA GGCTCC ACT GGAGCC TTTCACTCATCAAAT SSU05_1761 1661110 - 1662447 + | DinF TERM 2156 1662480 - 1662452 - T 91 -9.7 -4.45517 | opp_overlap 1662457, overlap 1662457 AAAGTATTTAGAAAA GAAAACGCATGAA ACT CTCATGCGTTTTT AAAATAGTATTTTCG TERM 2157 1662457 - 1662475 + T 90 -8.9 -4.63928 | opp_overlap 1662452 1662457 ATTTAGAAAAGAAAA CGCATGA AACTC TCATGCG TTTTTAAAATAGTAT TERM 2158 1662475 - 1662457 - T 100 -9.6 -5.19275 | opp_overlap 1662457, overlap 1662452 ATTTAGAAAAGAAAA CGCATGAA ACT CTCATGCG TTTTTAAAATAGTAT SSU05_1762 1662846 - 1662469 - | hypothetical protein TERM 2159 1662610 - 1662600 - G 75 -3.2 -5.10208 | overlap 1662607 CAAGGCTAACAAAAA GGAA TAT TCCC AGAAGGACCAATAAT TERM 2160 1662970 - 1663006 + r 83 -5.8 -5.21709 | overlap 1662972 AGCGGGCTATAATAA TCCTGCTCATCAGCCT AGAGC GGGCTGTTGGGTAGCA TTTTTTAGTCTGAGC TERM 2161 1663145 - 1663129 - R 71 -7.3 -3.91716 | opp_overlap 1663128 1663131 CTAGCTTGGAAATAA GACTTGC GAA ACAAGTC ACTTTCGTAGAGTAT TERM 2162 1663245 - 1663277 + r 76 -6.4 -4.43714 | opp_overlap 1663245 1663253, overlap 1663253 AGTAGGCTGCAAGCA CAAAAAAAGACTAG AAAAC CTAGTCTTTCCTTG TTTATTATCATTTAT TERM 2163 1663277 - 1663245 - R 81 -11.5 -2.7185 | opp_overlap 1663245 1663253, overlap 1663253 AGTAGGCTGCAAGCA CAAAAAAAGACTAGA AAA CCTAGTCTTTCCTTG TTTATTATCATTTAT TERM 2164 1663253 - 1663269 + r 73 -6.6 -4.20454 | opp_overlap 1663245 1663253, overlap 1663245 GCAAGCACAAAAAAA GACTAG AAAAC CTAGTC TTTCCTTGTTTATTA TERM 2165 1663269 - 1663253 - R 100 -7.3 -5.71983 | opp_overlap 1663253 1663245, overlap 1663245 GCAAGCACAAAAAAA GACTAGA AAA CCTAGTC TTTCCTTGTTTATTA SSU05_1763 1663552 - 1663295 - | hypothetical protein TERM 2166 1663524 - 1663536 + g 70 -2.7 -4.99435 | TTGCGGGCCAATTCA TTGAT GCG ATCGA TTTTTGCTTGTTCCA glyS 1665598 - 1663562 - | glycyl-tRNA synthetase subunit beta glyQ 1666515 - 1665598 - | glycyl-tRNA synthetase subunit alpha SSU05_1766 1667305 - 1666826 - | Phage envelope protein SSU05_1767 1668276 - 1667572 - | hypothetical protein TERM 2167 1668352 - 1668301 - R 70 -3.2 -4.96848 | gap 1, overlap 1668302 CCTTTTATAGAAAAA TCAGCACCCTATGAACATCTTCTAA GAC CTA-ACGACGTTCATAAAATGCTGT TGCATGACTACCCGG SSU05_1768 1669150 - 1668458 - | ABC-type metal ion transport system, permease component SSU05_1769 1670224 - 1669151 - | ABC-type metal ion transport system, ATPase component SSU05_1770 1671575 - 1670208 - | acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase-like protein TERM 2168 1670258 - 1670274 + g 72 -6.5 -4.26903 | opp_overlap 1670248 1670259, overlap 1670259 CAACATGGCTATAGT AGTCAGC GAT GCTGACA TTTTCATCACCTGCA TERM 2169 1670273 - 1670259 - G 71 -10 -2.63479 | opp_overlap 1670258 1670259, overlap 1670248 AACATGGCTATAGTA GTCAGC GAT GCTGAC ATTTTCATCACCTGC TERM 2170 1670259 - 1670273 + g 74 -10 -3.1582 | opp_overlap 1670248 1670259, overlap 1670258 AACATGGCTATAGTA GTCAGC GAT GCTGAC ATTTTCATCACCTGC TERM 2171 1671503 - 1671485 - G 71 -4.6 -4.72272 | overlap 1671487 TCTGCTGAGCAAAAA TGGATTTC TTT GAAATCAA GACCTTCAACTTTTC TERM 2172 1671723 - 1671684 - R 80 -6.4 -4.84359 | opp_overlap 1671686, overlap 1671686 1671690 1671692 TTATCTCTATAAAAA CAGATAGAGGGCTGAACA ATTC TGCCCAGTCCTCAACCTA TTTACATTTTACCAA TERM 2173 1671721 - 1671686 - R 70 -6.8 -4.04397 | opp_overlap 1671686, overlap 1671684 1671690 1671692 ATCTCTATAAAAACA GATAGAGGGCTGAACA ATTC TGCCCAGTCCTCAACC TATTTACATTTTACC TERM 2174 1671717 - 1671690 - R 70 -8.4 -3.37205 | opp_overlap 1671686, overlap 1671686 1671684 1671692 CTATAAAAACAGATA GAGGGCTGAACA ATTC TGCCCAGTCCTC AACCTATTTACATTT TERM 2175 1671710 - 1671692 - R 71 -8.8 -3.23488 | opp_overlap 1671686, overlap 1671690 1671686 1671684 ATAAAAACAGATAGA GGGCTGAA CAA TTCTGCCC AGTCCTCAACCTATT SSU05_1771 1672301 - 1671732 - | ABC-type metal ion transport system, periplasmic component/surface antigen TERM 2176 1671901 - 1671918 + g 80 -6.3 -4.91109 | GAATTTTCATCTTTT TGCTCTT TGTA AAGGGCA TTTTTGTAATCCAAA TERM 2177 1671942 - 1671957 + g 70 -7.6 -3.58343 | ATCCAAACCAGCTTC CAACAC AAAT GTGTTG TTTACAACTGCTGCA SSU05_1772 1672583 - 1672473 - | hypothetical protein TERM 2178 1672682 - 1672662 - R 73 -7 -4.03234 | opp_overlap 1672644 CTTTTTTTATAGAAA GTTATAAC TTTTC GTTATAAC AAATACCCTTGCAAT TERM 2179 1672732 - 1672719 - R 100 -8.1 -5.20333 | opp_overlap 1672720 TATTGATAATAAAAA GAGGG ATAC CCCTC TTAAAATATATCTAC SSU05_1773 1673422 - 1672733 - | glutamine amidotransferase, class I TERM 2180 1673621 - 1673602 - H 81 -3.6 -5.45652 | overlap 1673603 ACGCTTAAGAAAAAA CTATACTG GAGC CAGCATAA AAAAGTCAAGCTTGA TERM 2181 1673631 - 1673645 + H 79 -3.5 -5.4477 | opp_overlap 1673631, overlap 1673631 GCATAAAAAAGTCAA GCTTG ATAAA CAGGC TTTTTTTCAAGCTTT TERM 2182 1674157 - 1674145 - g 75 -3.4 -5.17353 | AGACCGATGAAAAAA TGGT TCAAC ACCA ACTACCACTATATCG TERM 2183 1675619 - 1675603 - g 70 -5.1 -4.56597 | GCCCTTCGTGAAAAA CTACCAC TCC GTCGTAG CGACTGGTACAGCGA TERM 2184 1676036 - 1675999 - g 77 -4.9 -5.04733 | gap 1, overlap 1676003 GAATCAGAAACAAAA GCTAGTCTTATCCACTTG ACT CAAGCAGCTAAGGC-AGC CAGAAAGGAACTCTA SSU05_1774 1673803 - 1676052 + | 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase SSU05_1775 1676056 - 1676916 + | 5,10-methylenetetrahydrofolate reductase TERM 2185 1676948 - 1676921 - T 82 -7.6 -4.45485 | opp_overlap 1676924, overlap 1676922 1676923 ATTATAGTTAGAAAA CTCCCCCTGAGC CCAA GCTCAGGGGTTA TTCTATGCCCTGTGA TERM 2186 1676947 - 1676922 - T 71 -8.9 -3.26568 | opp_overlap 1676924, overlap 1676921 1676923 TTATAGTTAGAAAAC TCCCCCTGAGC CCAA GCTCAGGGGTT ATTCTATGCCCTGTG TERM 2187 1676946 - 1676923 - T 82 -12.4 -2.55459 | opp_overlap 1676924, overlap 1676922 1676921 TATAGTTAGAAAACT CCCCCTGAGC CCAA GCTCAGGGGT TATTCTATGCCCTGT TERM 2188 1676924 - 1676945 + T 100 -15.9 -3.88946 | opp_overlap 1676923 1676922 1676921 ATAGTTAGAAAACTC CCCCTGAGC CCAA GCTCAGGGG TTATTCTATGCCCTG TERM 2189 1677245 - 1677224 - T 100 -9.5 -5.95539 | overlap 1677228 TCGTAAATAAAAAAA CTGACCTTC AAAT GAAGATCAG TTCAAGGATAATAAA SSU05_1776 1678725 - 1677265 - | permease SSU05_1777 1679058 - 1679882 + | HAD superfamily hydrolase TERM 2190 1679888 - 1679916 + F 77 -10.5 -2.80966 | opp_overlap 1679894, overlap 1679894 ATTTTTATAGACATC AAAAAACCTGATA AAC TATCAGGTTTTTG TCATATTCGTTGCAT TERM 2191 1679910 - 1679894 - f 100 -9.5 -5.25893 | opp_overlap 1679888 1679894 ATAGACATCAAAAAA CCTGATA AAC TATCAGG TTTTTGTCATATTCG TERM 2192 1679894 - 1679910 + F 100 -9.5 -4.98436 | opp_overlap 1679894, overlap 1679888 ATAGACATCAAAAAA CCTGATA AAC TATCAGG TTTTTGTCATATTCG SSU05_1778 1680113 - 1681105 + | putative PTS system, mannose-specific component IIAB SSU05_1779 1681137 - 1681946 + | mannose-specific PTS IIC SSU05_1780 1681964 - 1682875 + | mannose-specific PTS IID TERM 2193 1682883 - 1682898 + F 95 -11.8 -4.52047 | opp_overlap 1682883 1682880 TTATGTAATCAAGGA CCCCGC TCTT GCGGGG TTTTATGATATAATG TERM 2194 1682898 - 1682883 - f 82 -11.8 -2.8507 | opp_overlap 1682883, overlap 1682880 TTATGTAATCAAGGA CCCCGC TCTT GCGGGG TTTTATGATATAATG SSU05_1781 1682935 - 1683306 + | ManO TERM 2195 1683915 - 1683886 - g 73 -3.5 -4.92757 | gap 1, opp_overlap 1683902, overlap 1683890 GGATGAAGAAGAAAA CGTAGAGGTTCGCC GTT GGGGAACACCT-CG TGAATTCACTTTCGA SSU05_1782 1683395 - 1684681 + | seryl-tRNA synthetase SSU05_1783 1684685 - 1684798 + | seryl-tRNA synthetase TERM 2196 1684837 - 1684813 - T 81 -7.1 -4.63044 | opp_overlap 1684813 AGCCATACAAAGAAA GAGCGAGGAAA AAT CCTACTCGCTC TTTTCATTTATCTAA TERM 2197 1684813 - 1684837 + T 73 -5.7 -4.65153 | opp_overlap 1684813 AGCCATACAAAGAAA GAGCGAGGA AAAATCC TACTCGCTC TTTTCATTTATCTAA SSU05_1784 1685562 - 1684849 - | Type I restriction-modification system methyltransferase subunit SSU05_1785 1686439 - 1685537 - | Type I restriction-modification system methyltransferase subunit TERM 2198 1685608 - 1685624 + gr 80 -10.9 -3.14132 | TATTGCTGTAGCCGA CCTGATG CAT CATCAGG TTCATCCGCGCCAAG SSU05_1786 1687689 - 1686484 - | restriction endonuclease S subunit TERM 2199 1687656 - 1687674 + g 84 -3.8 -5.56263 | overlap 1687657 TGAATCCGGGGAAGC GCAATCGT GGT ACGGTTGA TTTTTCTTTTGTCAT TERM 2200 1687657 - 1687673 + g 72 -7.3 -3.91317 | overlap 1687656 GAATCCGGGGAAGCG CAATCGT GGT ACGGTTG ATTTTTCTTTTGTCA SSU05_1787 1691003 - 1687797 - | Type I site-specific restriction-modification system, R (restriction) subunit and related helicase TERM 2201 1690014 - 1690024 + g 71 -6.8 -4.12188 | overlap 1690009 GGGCATTCGACTTGC CAGC CAA GCTG TTTTAAAACTAGTGA SSU05_1788 1691181 - 1690996 - | hypothetical protein SSU05_1789 1691600 - 1691181 - | hypothetical protein TERM 2202 1691582 - 1691592 + g 71 -4 -4.81083 | overlap 1691588 GTTTCATAATTTCCC TTTC TTT GAAA TTTTTCATAATTACA TERM 2203 1691819 - 1691837 + G 78 -9.6 -3.64283 | ATTGCAGTGGCTTAT CAGGCTAG CTC CTAGTCTG TTGTTGGAAGATTTG SSU05_1790 1691694 - 1692227 + | integrase SSU05_1791 1692353 - 1692622 + | integrase TERM 2204 1692649 - 1692670 + T 71 -4.3 -4.87592 | opp_overlap 1692649, overlap 1692644 1692641 1692639 CTACTTATAGCAAAA GACGAATCC GTAT GGAACCGTC TTTTCTTATATATAG TERM 2205 1692670 - 1692649 - T 73 -6.5 -4.3586 | opp_overlap 1692649 1692644 1692641 1692639 CTACTTATAGCAAAA GACGAATCC GTAT GGAACCGTC TTTTCTTATATATAG SSU05_1792 1693068 - 1692676 - | hypothetical protein TERM 2206 1693177 - 1693167 - R 78 -5.4 -4.91109 | CCGCCACCAGAAAAA GACT AAA AGTC CAAGTGTCATCAGCC SSU05_1793 1694144 - 1693512 - | hypothetical protein SSU05_1794 1694262 - 1694137 - | histone acetyltransferase HPA2-like acetyltransferase SSU05_1795 1694612 - 1694244 - | histone acetyltransferase HPA2-like acetyltransferase TERM 2207 1694664 - 1694681 + r 86 -8.5 -4.386 | opp_overlap 1694664 AATCTATCAAAAAAA TACTAGG TCTT CCTAGTA TTTTCTAAAGCGTTG TERM 2208 1694681 - 1694664 - R 100 -8.5 -5.54894 | opp_overlap 1694664 AATCTATCAAAAAAA TACTAGG TCTT CCTAGTA TTTTCTAAAGCGTTG SSU05_1796 1695449 - 1694676 - | acetyl-CoA carboxylase subunit alpha SSU05_1797 1695982 - 1695446 - | Acetyl-CoA carboxylase beta subunit SSU05_1798 1696311 - 1695964 - | Acetyl-CoA carboxylase beta subunit SSU05_1799 1697699 - 1696326 - | acetyl-CoA carboxylase biotin carboxylase subunit TERM 2209 1697855 - 1697867 + r 74 -7.7 -3.85698 | opp_overlap 1697854 AGGTTGGAGATAGAG CGAAC GAA GTTCG TTTCTCCAAGAGCAG SSU05_1800 1698490 - 1697993 - | 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratase SSU05_1801 1698887 - 1698444 - | acetyl-CoA carboxylase biotin carboxyl carrier protein subunit SSU05_1802 1700123 - 1698888 - | 3-oxoacyl-(acyl carrier protein) synthase II TERM 2210 1699305 - 1699285 - G 86 -11.9 -3.02511 | opp_overlap 1699278 TTCATGGCCTTAATA GCACCCAGA CCT TCTGGATGC GGAGAAGTCATGTGG fabG 1700883 - 1700149 - | 3-ketoacyl-(acyl-carrier-protein) reductase TERM 2211 1700216 - 1700200 - G 70 -9.5 -2.87132 | CTGTCCTGTTAGATA TTCTTGC TTG GCAAGAA ACACTGCAACATCAG SSU05_1804 1701825 - 1700893 - | (acyl-carrier-protein) S-malonyltransferase TERM 2212 1701088 - 1701105 + g 71 -2 -5.15634 | gap 1, overlap 1701091 CACTTGACGGGGCAA GAGGGAC TTGAT GTCC-TC TTTTTTCATAACCTC SSU05_1805 1702780 - 1701815 - | 2-nitropropane dioxygenase-like protein TERM 2213 1702865 - 1702844 - R 74 -8 -3.97674 | TCATTAGGTAAACAA GTGAAGGG TTGCCC CCCCTCAC TCAAAAAATAGTTTG TERM 2214 1702936 - 1702925 - R 76 -4.4 -5.13741 | overlap 1702919 1702914 TTAACTTAAGAAAAA TGCT ACAT AGCA CTCTCCTTAACAGTC acpP 1703177 - 1702953 - | acyl carrier protein SSU05_1807 1704214 - 1703237 - | 3-oxoacyl-(acyl carrier protein) synthase III SSU05_1808 1704645 - 1704211 - | transcriptional regulator SSU05_1809 1705516 - 1704725 - | enoyl-CoA hydratase SSU05_1810 1706597 - 1705956 - | phosphatase/phosphohexomutase TERM 2215 1708026 - 1708046 + G 72 -6.1 -4.34444 | opp_overlap 1708026, overlap 1708027 TCAACTTGGCAATGA TTTCACAGG GAG CCAGTGAAG TTTCTGTTATGTTCG TERM 2216 1708097 - 1708085 - g 82 -6.9 -4.88795 | ACCGAAGAAAAGAAA CGCGC CCT GCACG CACTCTATGAAGCTT SSU05_1811 1706768 - 1708129 + | aspartate kinase TERM 2217 1708199 - 1708217 + T 71 -8.8 -3.17218 | overlap 1708197 1708202 TGATTTGATGAGTGT CAAGCTCC ATT GGAGCTAG TCTGATTTTAATTTT TERM 2218 1708268 - 1708308 + T 95 -5 -6.07374 | gap 2, opp_overlap 1708268 TTGAATAAACAAAAA TAGCTTAGAA-T-CAACGTT TCT GACGATGCAATTCTAAGCTA TTTTTTATTTTTTAT TERM 2219 1708308 - 1708268 - T 84 -4.3 -5.47159 | gap 2, opp_overlap 1708268 TTGAATAAACAAAAA TAGCTTAGAA-T-CAACGT TTCTG ACGATGCAATTCTAAGCTA TTTTTTATTTTTTAT TERM 2220 1708793 - 1708779 - T 71 -8.6 -3.18383 | opp_overlap 1708762 1708779 AGGCTCAGGTACGAA TAGTCC ACT GGACTA TTCGTATCCCCCAGA TERM 2221 1708779 - 1708793 + T 71 -8.6 -3.25823 | opp_overlap 1708779, overlap 1708762 AGGCTCAGGTACGAA TAGTCC ACT GGACTA TTCGTATCCCCCAGA alr 1710171 - 1709068 - | alanine racemase TERM 2222 1710005 - 1709990 - G 73 -2.5 -5.19879 | TTCGAAACACAAAAA CCAGC TGCTTG ACTGG ATAACTTTTTCGCTA acpS 1710523 - 1710164 - | 4'-phosphopantetheinyl transferase TERM 2223 1710626 - 1710605 - R 100 -14.5 -4.31329 | opp_overlap 1710600 CTAAAAATTGCAAAA GGACTGGAC AGCC GTCCAGTCC ACGCGTCATTCCTAT secA 1713172 - 1710638 - | preprotein translocase subunit SecA TERM 2224 1713328 - 1713297 - R 79 -7.4 -4.4648 | ATTTTTACCACAAAA CACCTCCTAG TCACAATAACTC CTAGGAGGTG AAAAATTTATAAAAT SSU05_1815 1716848 - 1713483 - | ribonucleases G and E TERM 2225 1715613 - 1715626 + g 86 -3.1 -5.68438 | TTCTTTGTTGAACAA CAGTA AATC TGCTG TTTTTTGTTTCATAG TERM 2226 1716494 - 1716467 - G 70 -7.2 -3.75738 | gap 1, opp_overlap 1716472, overlap 1716472 CATTATGAGCAATAA CATCACCCTTGTT CAT AACAAGGAT-ATG TGGAAAGTCATGAAT TERM 2227 1717186 - 1717215 + r 75 -9.4 -3.17571 | TTATAGTCATCGTTA GTTTTTGAGGCG CTGTTT CGGCTCAAAAAC TTAAATTGAAGAGTT TERM 2228 1717363 - 1717333 - R 100 -12.8 -4.96848 | opp_overlap 1717336 TTTTTTAGATAAAAA GAAGTGAGAGTT ACATAAA AACTCTCACTTC ACTGTCAAGTTATTG TERM 2229 1717336 - 1717360 + r 71 -8.7 -3.13475 | opp_overlap 1717333 TTTAGATAAAAAGAA GTGAGAGTT ACATAAA AACTCTCAC TTCACTGTCAAGTTA SSU05_1816 1718389 - 1717457 - | transcriptional regulator/sugar kinase TERM 2230 1717813 - 1717828 + g 72 -7.6 -3.81461 | opp_overlap 1717806 1717805 CCAAACACCCATTGT GGAATG GACA CATTCC TTTAAATTCATGTTT TERM 2231 1718421 - 1718391 - R 73 -7.1 -4.07968 | gap 2, opp_overlap 1718393 1718395 1718396 1718402, overlap 1718396 1718402 TAACATATAAGCAAA CAGAAGAAAAAGGCT GAA AGCCTTTTTC--CTG TTAATTATGTAGTAG TERM 2232 1718395 - 1718419 + r 78 -10.1 -3.32424 | opp_overlap 1718391 1718396 1718402, overlap 1718393 1718396 1718402 ATATAAGCAAACAGA AGAAAAAGGCT GAA AGCCTTTTTCC TGTTAATTATGTAGT TERM 2233 1718396 - 1718418 + r 93 -13.6 -2.58731 | opp_overlap 1718391 1718396 1718402, overlap 1718395 1718393 1718402 TATAAGCAAACAGAA GAAAAAGGCT GAA AGCCTTTTTC CTGTTAATTATGTAG TERM 2234 1718418 - 1718396 - R 100 -13.6 -3.91905 | opp_overlap 1718396 1718395 1718393 1718402, overlap 1718391 1718402 TATAAGCAAACAGAA GAAAAAGGCT GAA AGCCTTTTTC CTGTTAATTATGTAG TERM 2235 1718402 - 1718412 + r 82 -6.8 -4.90136 | opp_overlap 1718396 1718391 1718402, overlap 1718396 1718395 1718393 CAAACAGAAGAAAAA GGCT GAA AGCC TTTTTCCTGTTAATT TERM 2236 1718412 - 1718402 - R 91 -6.8 -5.33331 | opp_overlap 1718402 1718396 1718395 1718393, overlap 1718396 1718391 CAAACAGAAGAAAAA GGCT GAA AGCC TTTTTCCTGTTAATT SSU05_1817 1720346 - 1718469 - | phosphotransferase system IIC component, glucose/maltose/N-acetylglucosamine-specific SSU05_1818 1720435 - 1722006 + | Beta-fructosidases (levanase/invertase) TERM 2237 1722020 - 1721999 - g 71 -6.7 -4.08945 | gap 1 ATTATGGTCGCAAAA CTAACTGATG TCG CA-CAGTTAG CTGGGGTCAGCCCAA TERM 2238 1722395 - 1722379 - g 79 -10.9 -3.08679 | TCTCGGTATCCAAGA CTACGAC CGT GTCGTAG CTCCAATTATCGCTT SSU05_1819 1721987 - 1722952 + | transcriptional regulator TERM 2239 1722985 - 1722958 - T 100 -11.4 -5.74122 | opp_overlap 1722958 TAGTATATAAAAAAA GCTGTACCTAAT AAAA ATTAGGTGCAGC TTTTTTGTGATACAT TERM 2240 1722958 - 1722985 + T 100 -13.6 -5.31877 | opp_overlap 1722958 TAGTATATAAAAAAA GCTGTACCTAAT AAAA ATTAGGTGCAGC TTTTTTGTGATACAT TERM 2241 1723040 - 1723024 - T 78 -3.7 -5.26875 | opp_overlap 1723024 1723033 TTCTCAAGTAAAAAA GAAGC TCATCAG GCTTC TTGCTTTAATAAACT SSU05_1820 1723206 - 1723012 - | transcription termination factor SSU05_1821 1723454 - 1723218 - | transcription termination factor SSU05_1822 1723833 - 1723441 - | hypothetical protein SSU05_1823 1724193 - 1723861 - | translation elongation factor P (EF-P) SSU05_1824 1724419 - 1724237 - | putative translation elongation factor EF-P SSU05_1825 1725268 - 1724483 - | aminopeptidase P; XAA-pro aminopeptidase SSU05_1826 1725485 - 1725279 - | Xaa-Pro aminopeptidase TERM 2242 1725411 - 1725399 - G 74 -7.7 -3.95153 | CGAATCAGTCACAAA CAAGC GAA GCTTG CCACTAATGAATACA TERM 2243 1725515 - 1725525 + G 71 -4 -4.81752 | overlap 1725504 TTGATTGGAGCTAAT TTTG CTT CAAA TTTTTCAGTCTTTTT SSU05_1827 1725500 - 1725610 + | hypothetical protein TERM 2244 1725640 - 1725627 - T 91 -5.9 -5.77988 | opp_overlap 1725627 1725621 1725615, overlap 1725617 AGATAGAGAAAAAAA GCCGC AGAG GCGAC TTTTTATTTCAACTT TERM 2245 1725627 - 1725640 + T 78 -3.7 -5.29846 | opp_overlap 1725617 1725627, overlap 1725621 1725615 AGATAGAGAAAAAAA GCCGC AGAG GCGAC TTTTTATTTCAACTT uvrA 1728469 - 1725644 - | excinuclease ABC subunit A TERM 2246 1728191 - 1728201 + g 80 -4.6 -5.1675 | overlap 1728182 1728180 1728179 TGTCGAACGCGGATT CCGC GAT GTGG TTTTTTGGTCAATGG TERM 2247 1728532 - 1728547 + H 78 -6.2 -4.84017 | TGACGTCACATCAGT GACAAA ACAT TTTGTC TTTTTCTCGACGCTT TERM 2248 1729042 - 1729016 - g 70 -5.8 -4.33417 | opp_overlap 1729016 1729012 CTGATTTAGAAGAAA TCCAAACCTTTG AAC CAGGGGCTTGGA TTAATTTGGTCAACC SSU05_1829 1728973 - 1729203 + | Mg2+ and Co2+ transporter SSU05_1830 1729241 - 1729918 + | Mg2+ and Co2+ transporter TERM 2249 1730202 - 1730216 + G 72 -6.4 -4.3534 | ATCCATGGTTGATGT GGCTAG ATT CTAGTC TTTTCATGCTTGCAA SSU05_1831 1729934 - 1730590 + | hypothetical protein TERM 2250 1730600 - 1730621 + T 100 -10.9 -5.07523 | opp_overlap 1730600 CAATAATAAAACAAA GCGATTGGA ATAT TCCAGTCGC TTTTGTTTATCTATA TERM 2251 1730621 - 1730600 - T 100 -8.7 -4.96427 | opp_overlap 1730600 CAATAATAAAACAAA GCGATTGGA ATAT TCCAGTCGC TTTTGTTTATCTATA TERM 2252 1730872 - 1730859 - T 95 -8.1 -4.74103 | opp_overlap 1730859 GGCGCAAGCTAAAAA GACCC GTCG GGGTC TCAATTCGCTTTCTT TERM 2253 1730952 - 1730982 + T 76 -10.6 -2.59569 | opp_overlap 1730960, overlap 1730960 AGTTTCTTGGGCGCA AGAAAAAATGGTCC ACT GGACCATTTTTTTA ATCTTCGTTTACGAA TERM 2254 1730960 - 1730974 + T 100 -10 -5.63374 | opp_overlap 1730960, overlap 1730952 GGGCGCAAGAAAAAA TGGTCC ACT GGACCA TTTTTTTAATCTTCG TERM 2255 1730974 - 1730960 - T 100 -10 -5.4505 | opp_overlap 1730960 1730952 GGGCGCAAGAAAAAA TGGTCC ACT GGACCA TTTTTTTAATCTTCG rpsR 1731219 - 1730980 - | 30S ribosomal protein S18 SSU05_1833 1731746 - 1731252 - | single-strand DNA-binding protein SSU05_1834 1732009 - 1731758 - | ribosomal protein S6 TERM 2256 1732586 - 1732558 - g 73 -5.3 -4.68593 | overlap 1732583 TCTACTACGCAAAAA GAGCTCAGCTTGA TTA TGAAGTTAAGCTC TCAGATTCGAGAACA SSU05_1835 1732287 - 1733450 + | hypothetical protein TERM 2257 1733617 - 1733655 + T 73 -9 -3.43437 | opp_overlap 1733609 1733623, overlap 1733623 1733628 ATCAACATTTTTAGT CAAAAACAGAACTTAGTC TGA GACTAAATTCTGTTGATG TTATGCAGTTTTCTC TERM 2258 1733649 - 1733623 - T 100 -13.2 -4.66163 | opp_overlap 1733617 1733623 1733628 ATTTTTAGTCAAAAA CAGAACTTAGTC TGA GACTAAATTCTG TTGATGTTATGCAGT TERM 2259 1733623 - 1733649 + T 82 -11 -3.42013 | opp_overlap 1733623, overlap 1733617 1733628 ATTTTTAGTCAAAAA CAGAACTTAGTC TGA GACTAAATTCTG TTGATGTTATGCAGT TERM 2260 1733764 - 1733735 - T 74 -2.9 -5.252 | gap 1, opp_overlap 1733752, overlap 1733739 1733750 CATTTTCACAAAAAA TAAAGACTGCCC AAACAAA GGGCAG-CCCTA TGAATTAAGCTACAA TERM 2261 1733761 - 1733739 - T 100 -8.4 -5.13354 | opp_overlap 1733752, overlap 1733735 1733750 TTCACAAAAAATAAA GACTGCCC AAACAAA GGGCAGCC CTATGAATTAAGCTA SSU05_1836 1734758 - 1733769 - | lipoate-protein ligase SSU05_1837 1734888 - 1736078 + | hypothetical protein TERM 2262 1736096 - 1736114 + T 72 -3.9 -4.90013 | gap 1, opp_overlap 1736089 1736096 ATATATCACAAAAAA GAAAG-CC ACAT GGACTTTC TTTTTGCTTAGCTTA TERM 2263 1736114 - 1736096 - T 86 -5.3 -5.35459 | opp_overlap 1736096, overlap 1736089 ATATATCACAAAAAA GAAAGCC ACATG GACTTTC TTTTTGCTTAGCTTA SSU05_1838 1737890 - 1736130 - | pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes SSU05_1839 1739552 - 1738164 - | branched-chain alpha-keto acid dehydrogenase subunit E2 TERM 2264 1739719 - 1739705 - R 70 -8.6 -3.08072 | overlap 1739700 AAGAACCAAACCAGA CTTCGA TAA TCGAAG CGGCTCAATTCTTTT SSU05_1840 1740888 - 1739893 - | pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, beta subunit TERM 2265 1741142 - 1741099 - R 76 -6.3 -4.57837 | opp_overlap 1741099 1741098 1741104, overlap 1741104 AGAGGCTTGGAAAAA TAGATGAGCCA-TTAGTGATG TCCA CATCACTAGCTGACTC-TCTA ATTTTTCTGTGCCTC SSU05_1841 1742188 - 1741175 - | pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, alpha subunit SSU05_1842 1742295 - 1743035 + | hypothetical protein TERM 2266 1743029 - 1743052 + T 100 -14 -5.21506 | opp_overlap 1743029 GGAAAGCAAACGAAA GGTCTGAGTT CGTC AACTCAGACC TTTTTGTATTATTAT TERM 2267 1743052 - 1743029 - T 100 -14 -4.17878 | opp_overlap 1743029 GGAAAGCAAACGAAA GGTCTGAGTT CGTC AACTCAGACC TTTTTGTATTATTAT SSU05_1843 1744225 - 1743071 - | dockerin type I TERM 2268 1744367 - 1744351 - R 95 -11.5 -4.56607 | overlap 1744361 TTAGGAACTACAAAA GGCCGGG AAA CCCAGCC TAGGAATAATCATTG SSU05_1844 1745109 - 1744390 - | hypothetical protein TERM 2269 1745334 - 1745315 - R 80 -6.4 -4.87665 | opp_overlap 1745310 1745307 TCCGAGCCAGAAAAA GCCGAATG TTGC CATCCGAC TTTTGTTGTTAATCT SSU05_1845 1745753 - 1745343 - | ribosome-binding factor A TERM 2270 1745423 - 1745403 - G 79 -11.3 -2.54896 | GCCGTACTCAATTGA TTGGTCTTT TTC AAAGACCAA ATCCGGAATTTTATA TERM 2271 1745740 - 1745725 - G 79 -6.8 -4.5954 | opp_overlap 1745725 TTAGATGATAGAAAA GCTGAG TTTC CCCAGC TTGAATAATCCAAGT infB 1748674 - 1745852 - | translation initiation factor IF-2 TERM 2272 1746601 - 1746615 + g 72 -7.8 -3.90112 | AAACCGCGAAATGGT CGCCAG CCA TTGGCG TTTCGTTCAAACCAG TERM 2273 1747643 - 1747663 + g 100 -4 -6.01725 | gap 1 TTCTGTGACAGGTTT GGC-AGGTT GGTT AGCCTTGCC TTTTTTATTTTTCTT TERM 2274 1747765 - 1747783 + g 79 -3.1 -5.39721 | GTGGACCATCTTCTT CGTCACT ATTAA AGTCACG TTTTTTATCTGGTCG SSU05_1847 1749000 - 1748692 - | hypothetical protein SSU05_1848 1749283 - 1748987 - | nucleic-acid-binding protein implicated in transcription termination nusA 1750442 - 1749300 - | transcription elongation factor NusA SSU05_1850 1750992 - 1750516 - | hypothetical protein TERM 2275 1751144 - 1751125 - R 84 -10 -3.70902 | opp_overlap 1751124 1751125 CCGTGTACAGGGAAA GGGTTGAC TGAC GCCAACCC CTTTTCTCATTATTC TERM 2276 1751430 - 1751404 - R 80 -11 -3.28497 | opp_overlap 1751410, overlap 1751410 GTACGGCAAAGCGAA TTCAAACAATCC AGT GGAGTGTTTGAA CTTAGAAATAAGGAA TERM 2277 1751532 - 1751518 - R 78 -5.7 -5.04601 | opp_overlap 1751518 TCGACAAAGGAAAAA GGTCT CTGTT AGACC TCTCCTCATTTTCCA trmB 1752195 - 1751557 - | tRNA (guanine-N(7))-methyltransferase SSU05_1852 1752794 - 1752192 - | hypothetical protein SSU05_1854 1754078 - 1753038 - | ABC transporter permease SSU05_1853 1753758 - 1753585 - | hypothetical protein SSU05_1855 1754809 - 1754075 - | ABC-type multidrug transport system, ATPase component SSU05_1856 1754872 - 1755285 + | diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases SSU05_1857 1755287 - 1755589 + | methyl-accepting chemotaxis protein TERM 2278 1755607 - 1755648 + T 100 -14.1 -3.18292 | opp_overlap 1755607 1755617, overlap 1755608 1755617 TCTGGAATTTCCAAA TATATAAAAATAGAGGTTG AAAA CAACCTCTATTTTTATAGG CTTTTAGTACTCGCT TERM 2279 1755648 - 1755607 - T 90 -11.9 -3.60792 | opp_overlap 1755607 1755608 1755617, overlap 1755617 TCTGGAATTTCCAAA TATATAAAAATAGAGGTTG AAAA CAACCTCTATTTTTATAGG CTTTTAGTACTCGCT TERM 2280 1755608 - 1755647 + T 100 -15.4 -2.50493 | opp_overlap 1755607 1755617, overlap 1755607 1755617 CTGGAATTTCCAAAT ATATAAAAATAGAGGTTG AAAA CAACCTCTATTTTTATAG GCTTTTAGTACTCGC TERM 2281 1755617 - 1755638 + T 100 -11.7 -4.90296 | opp_overlap 1755607 1755617, overlap 1755608 1755607 CCAAATATATAAAAA TAGAGGTTG AAAA CAACCTCTA TTTTTATAGGCTTTT TERM 2282 1755638 - 1755617 - T 100 -11.7 -5.14985 | opp_overlap 1755617 1755608 1755607, overlap 1755607 CCAAATATATAAAAA TAGAGGTTG AAAA CAACCTCTA TTTTTATAGGCTTTT SSU05_1858 1756891 - 1755698 - | transcriptional regulator SSU05_1859 1757415 - 1756888 - | histone acetyltransferase HPA2-like acetyltransferase TERM 2283 1757376 - 1757363 - G 70 -3.8 -4.90918 | opp_overlap 1757366 1757375, overlap 1757364 ATAAAATCAATAAAA GCTG CTGCAT CAGC TGGTTCAGCTTCACT SSU05_1860 1757908 - 1757408 - | ATPase or kinase TERM 2284 1757918 - 1757947 + r 78 -7.9 -4.32177 | opp_overlap 1757923, overlap 1757923 AGACAAGTCGACAGA AAAAATCGCAAGC CAGA GCCTGCGATTTTG TTTATTCTACGCTGA TERM 2285 1757942 - 1757923 - R 100 -10 -5.37043 | opp_overlap 1757918 1757923 AGTCGACAGAAAAAA TCGCAAGC CAGA GCCTGCGA TTTTGTTTATTCTAC TERM 2286 1757923 - 1757942 + r 93 -7.8 -5.14682 | opp_overlap 1757923, overlap 1757918 AGTCGACAGAAAAAA TCGCAAGC CAGA GCCTGCGA TTTTGTTTATTCTAC SSU05_1861 1759613 - 1757949 - | kinase related to dihydroxyacetone kinase SSU05_1862 1759981 - 1759616 - | hypothetical protein TERM 2287 1760087 - 1760125 + H 78 -3.9 -5.40464 | gap 1, opp_overlap 1760076 1760099, overlap 1760109 1760119 1760120 1760123 AACATACTAAGATTA GTAGTGAGGA-AATCTCC GACG GGAGAAAGTACTCACTAC TTTTTCTTTATGATA TERM 2288 1761017 - 1760997 - g 77 -6.2 -4.63218 | gap 1, opp_overlap 1760997 GTGCCGTCAAGAAAA CCTC-TCCA ATAC TGGAAGAGG TCCGTTACTATACAA TERM 2289 1761433 - 1761393 - g 100 -14.1 -5.05505 | opp_overlap 1761398 ATGAGAAACGAAAAA GACAATCGCAAACGACTTC AAC GAAGTCGCACACGATTGCC TCCATACATCGTCTC SSU05_1863 1760174 - 1761517 + | transposase TERM 2290 1761716 - 1761699 - T 95 -7.7 -5.38321 | opp_overlap 1761699, overlap 1761692 AAATAGTAGAAAAAA GAGTTCC CAAA GGAACCC TTTTCACAATTAACC SSU05_1864 1762628 - 1761726 - | peptide ABC transporter, permease protein SSU05_1865 1763598 - 1762642 - | ABC-type dipeptide/oligopeptide/nickel transport system, permease component SSU05_1866 1764541 - 1763600 - | ABC-type oligopeptide transport system, ATPase component SSU05_1867 1765542 - 1764544 - | ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component TERM 2291 1765856 - 1765906 + r 100 -17.5 -3.224 | gap 2, opp_overlap 1765865 1765875, overlap 1765865 1765875 ATTATCTGAAAATTC CAATAGCAATCTGAAAAAAGCCAAT CAA ATTGGC-TTTTTCAGATT-CTATTG TCTTCTAACAAATTA TERM 2292 1765865 - 1765898 + r 100 -13.5 -3.85527 | gap 1, opp_overlap 1765865 1765875, overlap 1765856 1765875 AAATTCCAATAGCAA TCTGAAAAAAGCCAAT CAA ATTGGC-TTTTTCAGA TTCTATTGTCTTCTA TERM 2293 1765898 - 1765865 - R 95 -13.5 -3.38361 | gap 1, opp_overlap 1765865 1765856 1765875, overlap 1765875 AAATTCCAATAGCAA TCTGAAAAAAGCCAAT CAA ATTGGC-TTTTTCAGA TTCTATTGTCTTCTA TERM 2294 1765889 - 1765875 - R 100 -8.6 -5.10029 | opp_overlap 1765865 1765856 1765875, overlap 1765865 AGCAATCTGAAAAAA GCCAAT CAA ATTGGC TTTTTCAGATTCTAT TERM 2295 1765875 - 1765889 + r 90 -8.6 -4.69622 | opp_overlap 1765875 1765865, overlap 1765865 1765856 AGCAATCTGAAAAAA GCCAAT CAA ATTGGC TTTTTCAGATTCTAT SSU05_1868 1767229 - 1765919 - | peptide ABC transporter, peptide-binding protein SSU05_1869 1767827 - 1767291 - | hypothetical protein TERM 2296 1767597 - 1767614 + g 72 -6.3 -4.26076 | TTGTTTTACTTCAGC CGGGAAT GACA ATTCCTG TTTTGCTGCACCTGA SSU05_1870 1767920 - 1769167 + | D-alanyl-D-alanine carboxypeptidase TERM 2297 1769201 - 1769173 - T 100 -13.4 -5.77632 | opp_overlap 1769173 AAAATTATAAAAAAA TAGTATGTCGAA CGATT TTCGACATACTA TTTTTTTATTGTAGA TERM 2298 1769173 - 1769201 + T 100 -13.4 -5.88565 | opp_overlap 1769173 AAAATTATAAAAAAA TAGTATGTCGAA CGATT TTCGACATACTA TTTTTTTATTGTAGA TERM 2299 1769352 - 1769329 - T 71 -7.4 -3.97368 | overlap 1769332 TCGTCAATTTATAAA GAAGAGCTAC TGCC GTCGCTCCTC ATCTCCTACTTCAGT SSU05_1871 1770904 - 1769420 - | ABC-type transport system involved in Fe-S cluster assembly, permease component SSU05_1872 1771032 - 1770913 - | hypothetical protein TERM 2300 1771092 - 1771064 - R 89 -11.2 -3.93262 | gap 1 CTTCAAGACACTAAA CTTGGTT-GGAAC TAAA GTTCCTAACCAAG TAACGCAAGGTTCTA SSU05_1873 1771625 - 1771185 - | NifU-like protein involved in Fe-S cluster formation SSU05_1874 1772835 - 1771612 - | selenocysteine lyase SSU05_1875 1774170 - 1772839 - | ABC-type transport system involved in Fe-S cluster assembly, permease component SSU05_1876 1774930 - 1774118 - | ABC-type transport system involved in Fe-S cluster assembly, ATPase component TERM 2301 1775287 - 1775310 + r 89 -8 -4.92757 | opp_overlap 1775289, overlap 1775290 CTAACTTTGAGAAGT GATGCGGGGC TTGA GCCCAGCCTC TTTTCTTGTTAATGA TERM 2302 1775409 - 1775422 + r 77 -8.1 -3.90464 | opp_overlap 1775409, overlap 1775404 ATTATATCAAAAAAA GAGCC TGAC GGCTC TTATCTTGTTTAGAA TERM 2303 1775422 - 1775409 - R 100 -8.1 -5.59357 | opp_overlap 1775409 1775404 ATTATATCAAAAAAA GAGCC TGAC GGCTC TTATCTTGTTTAGAA SSU05_1877 1776616 - 1775444 - | UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase TERM 2304 1776201 - 1776182 - G 70 -7.2 -3.89212 | GAGCCAGACAGGAAA TTGAAGGA AAGG TCCTCCAA AAGGAATCTTAAAGC SSU05_1878 1777350 - 1776613 - | adaptor protein TERM 2305 1777350 - 1777361 + r 70 -3 -5.10029 | overlap 1777351 TAACTACCTCATTCA TTGA TTCA TCAA TTTTTTAAAATTGAT TERM 2306 1777351 - 1777382 + r 73 -6.8 -4.21908 | overlap 1777350 AACTACCTCATTCAT TGATTCATCAATTT TTTA AAATTGATTGATCA TTTTCAATACTCATA TERM 2307 1777460 - 1777447 - R 100 -8.1 -5.2894 | opp_overlap 1777447 AAAGACAAAAGAAAA GCAGG TCTC CCTGC TCTTAAAATAAAAAT SSU05_1879 1778299 - 1777463 - | undecaprenyl pyrophosphate phosphatase SSU05_1880 1778426 - 1778785 + | hypothetical protein SSU05_1881 1778850 - 1779743 + | amino acid ABC transporter periplasmic protein SSU05_1882 1780199 - 1780732 + | amino acid ABC transporter ATP-binding protein TERM 2308 1780761 - 1780784 + T 100 -10.4 -5.44119 | opp_overlap 1780758 CATAGAAGACTATTA CTTACCAGTT TCAA AGCTGGTAAG TTTTTTTAGACTAAA TERM 2309 1780805 - 1780825 + T 88 -8.4 -4.61633 | opp_overlap 1780805 TTAGACTAAAAAAAA GAGGAATT CGTAA AATTCCTC TTTTTGGACATCTCT TERM 2310 1780825 - 1780805 - T 100 -9.1 -5.90981 | opp_overlap 1780805 TTAGACTAAAAAAAA GAGGAATTC GTA AAATTCCTC TTTTTGGACATCTCT TERM 2311 1780838 - 1780857 + T 72 -8 -3.70039 | CTCTTTTTGGACATC TCTAAATG AAAC CATTTAGA TTAGTTTTCAAATTT SSU05_1883 1781067 - 1780858 - | hypothetical protein TERM 2312 1781070 - 1781080 + r 74 -4 -5.1356 | CGTAACTAGTCATTA GAAA CCC TTTC TTTTTATTCGTGCAA SSU05_1884 1782053 - 1781151 - | membrane protease subunit SSU05_1885 1783313 - 1782063 - | threonine dehydratase TERM 2313 1783171 - 1783185 + g 70 -2.8 -4.98672 | opp_overlap 1783168 1783171, overlap 1783168 1783172 CGAATTTTAAAAGAG CGAACA CGC TGTTCA TTTTCTCTTTTTAAA TERM 2314 1783470 - 1783451 - R 73 -7.1 -4.17491 | opp_overlap 1783442 1783451 ATGAAATGGGCAAAA GAGCCGG AAAAAA CCAGCTC TTTTATTCATTTTCA TERM 2315 1783451 - 1783470 + r 76 -4.9 -4.89562 | opp_overlap 1783451, overlap 1783442 ATGAAATGGGCAAAA GAGCCGG AAAAAA CCAGCTC TTTTATTCATTTTCA TERM 2316 1783515 - 1783501 - R 86 -6.4 -5.14477 | GAGATAGGGAAAAAA GGGAAT GAC ATCCCC TCATCCGCCAACTCA SSU05_1886 1784618 - 1783596 - | ketol-acid reductoisomerase TERM 2317 1784319 - 1784309 - G 73 -8.2 -3.67622 | overlap 1784293 CATGGGCAAAACCAA GGGC ATT GCCC GCTTCCAAGTTTGGA ilvH 1785235 - 1784759 - | acetolactate synthase 3 regulatory subunit SSU05_1888 1786712 - 1785366 - | thiamine pyrophosphate-requiring enzyme SSU05_1889 1786949 - 1786725 - | thiamine pyrophosphate-requiring enzyme TERM 2318 1788190 - 1788177 - g 70 -5.3 -4.42806 | opp_overlap 1788186, overlap 1788183 TCATCTTTAAAGAAA GGAAA TCAT TTTCC CATGAAATTGCTTAA SSU05_1890 1787153 - 1788205 + | cell wall biosynthesis glycosyltransferase SSU05_1891 1788192 - 1789130 + | exopolysaccharide biosynthesis protein related to N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase TERM 2319 1789541 - 1789563 + F 81 -8.5 -4.35116 | opp_overlap 1789537 1789541 1789540 CAAATAAATTATAAG GGCACTTAA CATTC TTAGGTGCC TTTTACTGTAGAATA SSU05_1892 1789682 - 1791397 + | dihydroxy-acid dehydratase SSU05_1893 1791448 - 1791843 + | hypothetical protein TERM 2320 1791832 - 1791859 + T 75 -5.6 -4.88405 | opp_overlap 1791832, overlap 1791827 GACACGTTTAAAAAA GAGCTGCAGT AAAATAAA ACTGCAACTC TTTTATTTAGGGCTT TERM 2321 1791859 - 1791832 - T 89 -7.8 -5.04385 | opp_overlap 1791832 1791827 GACACGTTTAAAAAA GAGCTGCAGT AAAATAAA ACTGCAACTC TTTTATTTAGGGCTT SSU05_1894 1792203 - 1791862 - | metal-sulfur cluster biosynthetic protein SSU05_1895 1792515 - 1792294 - | hypothetical protein SSU05_1896 1792768 - 1792493 - | hypothetical protein SSU05_1897 1793392 - 1793111 - | 30S ribosomal protein S9 TERM 2322 1793176 - 1793146 - G 82 -10.4 -3.63515 | CGTCACGTTTAAGAA GACCTGCGCGTTTC AAT GAATCGCGGAAGTC TGGGTCTACTTGAAG TERM 2323 1793336 - 1793353 + g 90 -4.2 -5.69793 | AAGGTCAGCATGTGG GATGTA CTCTTC TACATC TTTTTTGTTTACTGT rplM 1793919 - 1793473 - | 50S ribosomal protein L13 TERM 2324 1794376 - 1794350 - R 82 -6.6 -5.00895 | GTCATCACACAAAAA GGGACACATCTT TAC AAGAAATATCCC TTAGAATCTAGGCTC SSU05_1899 1795052 - 1794384 - | hypothetical protein SSU05_1900 1795248 - 1795024 - | hypothetical protein SSU05_1901 1795766 - 1795245 - | hypothetical protein SSU05_1902 1796495 - 1795767 - | tRNA/rRNA methyltransferase TERM 2325 1796530 - 1796546 + r 73 -6.5 -4.3255 | opp_overlap 1796530 TTGGAAAAGGAAAAA GCCGAGA ATT TCTCAGC TTTCTTAGTTCACAC TERM 2326 1796546 - 1796530 - R 100 -8.7 -5.0925 | opp_overlap 1796530 TTGGAAAAGGAAAAA GCCGAGA ATT TCTCAGC TTTCTTAGTTCACAC SSU05_1903 1797777 - 1796551 - | hypothetical protein TERM 2327 1797643 - 1797657 + g 75 -5.8 -4.63928 | overlap 1797637 CTCATGCTCTTTTTG CAAAAT GTT ATTTTG TTTTTGAAGTGCTAT SSU05_1904 1797963 - 1798352 + | hypothetical protein TERM 2328 1798360 - 1798377 + F 100 -9.9 -5.56263 | opp_overlap 1798358 TTGCATAAGTAATTC CCTCCTA TCCT TAGGAGG TTTTTATTTTATGAT SSU05_1905 1798427 - 1799395 + | hypothetical protein SSU05_1906 1799658 - 1799392 - | hypothetical protein TERM 2329 1799867 - 1799846 - R 100 -10.9 -5.09426 | CTTAACCCCAAAAAA CCGCCAGAT TTTC ATCTAGCGG TCAGGTGTTTTATGA SSU05_1907 1801034 - 1799898 - | ABC-type sugar transport system, ATPase component TERM 2330 1801145 - 1801105 - RH 100 -14.3 -5.10208 | opp_overlap 1801108, overlap 1801108 CAAGGTGAACAAAAA GAACACAATCTTTTGTACA AGT TGCACAAAAGACTGTGTTA CTGAAATAGTTTACT TERM 2331 1801108 - 1801142 + rH 84 -11.6 -3.17956 | opp_overlap 1801105 1801108 GGTGAACAAAAAGAA CACAATCTTTTGTACA AGT TGCACAAAAGACTGTG TTACTGAAATAGTTT TERM 2332 1801142 - 1801108 - RH 100 -16 -4.63592 | opp_overlap 1801108, overlap 1801105 GGTGAACAAAAAGAA CACAATCTTTTGTACA AGT TGCACAAAAGACTGTG TTACTGAAATAGTTT SSU05_1909 1802124 - 1801264 - | regulator of polyketide synthase expression SSU05_1908 1801545 - 1801658 + | hypothetical protein SSU05_1910 1803459 - 1802137 - | response regulator SSU05_1911 1805068 - 1803419 - | sensor histidine kinase, putative SSU05_1912 1805671 - 1805111 - | integral membrane protein TERM 2333 1805171 - 1805157 - G 74 -4.3 -5.00467 | GGAAGAAGAATAAAA TCAAG GGAAG CTTGA ATAGCAAGTACCCCA TERM 2334 1805251 - 1805239 - G 73 -2.6 -5.1963 | TCCAATCAAGAAAAA GCGA GACAT CCGC CAACTGTAAGCCTGT SSU05_1913 1807244 - 1805895 - | transposase TERM 2335 1805979 - 1806019 + g 87 -6.1 -5.10877 | GAGACGATGTATGGA GGCAATCGTGTGCAGCTTC GTT GAAGTCGTTTGCGATTGTC TTTTTCGTTTCTTAT TERM 2336 1806395 - 1806415 + g 77 -6.2 -4.63218 | gap 1, opp_overlap 1806395 TTGTATAGTAATGCA CCTCTTCCA GTAT TGGA-GAGG TTTTCTTGACGGCAC TERM 2337 1807325 - 1807287 - R 78 -3.9 -5.40464 | gap 1, opp_overlap 1807300 1807323, overlap 1807261 1807264 1807263 1807281 TATCATAAAGAAAAA GTAGTGAGTACTTTCTCC CGTC GGAGATT-TCCTCACTAC TAATCTTAGTATGTT TERM 2338 1807397 - 1807373 - R 78 -5.6 -4.95487 | overlap 1807376 AAAATAAATACAAAA GAGGCTGAGC AAAAA GCCCAGCGCC ACTTCTTAGAGTTCG TERM 2339 1807523 - 1807537 + r 75 -8.6 -3.63627 | opp_overlap 1807523 ATCTCCAACCTCAAA CTGTCT CCC AGACAG TTTGAGCTGTGCGGG TERM 2340 1807537 - 1807523 - R 78 -8.6 -3.66356 | opp_overlap 1807523 ATCTCCAACCTCAAA CTGTCT CCC AGACAG TTTGAGCTGTGCGGG SSU05_1914 1809170 - 1807707 - | ABC-type sugar transport system, periplasmic component TERM 2341 1808778 - 1808792 + g 79 -7.8 -4.33248 | opp_overlap 1808780 GTCAATAATGTCATA GAGGGC CTT GCCTTC TTTCTTGTAAAGTTC SSU05_1915 1810163 - 1809240 - | ABC transporter membrane spanning permease - sugar transport TERM 2342 1809393 - 1809405 + g 76 -7.7 -4.08394 | opp_overlap 1809386, overlap 1809391 TGAGGACATGGCCGC TGCTG CGG CAGCA TTTTCAGAGAGATAT TERM 2343 1810132 - 1810152 + g 95 -4.8 -5.88471 | opp_overlap 1810132 CTAAATGAATGAATA GAAACAGA AGTGA TTTGTTTC TTTTTTTTCATACTC SSU05_1916 1811105 - 1810173 - | ABC transporter, permease protein TERM 2344 1811297 - 1811278 - R 81 -4.2 -5.25803 | overlap 1811280 AATTTGCATAAAAAA TTGAGCCC TTTC GAGCTCGA GAACTACTAGGTCGT SSU05_1917 1813190 - 1811304 - | glycosyl hydrolase-related protein TERM 2345 1812295 - 1812275 - G 79 -8.3 -4.21319 | AGTAATCCCAATAAA TCAAGGTCA CTC TGTCCTTGA GACGATCCAAATAAG SSU05_1918 1814120 - 1813197 - | transcriptional regulator/sugar kinase SSU05_1919 1816740 - 1814044 - | hypothetical protein TERM 2346 1814625 - 1814612 - GR 70 -3.7 -4.77079 | GATAGACTAATAAAA CTGCG ATGA CGCTG AGGATTGGACGGATT SSU05_1920 1818004 - 1816718 - | hypothetical protein TERM 2347 1818167 - 1818180 + H 70 -5.3 -4.46835 | AATATTGCCAGTTTC GGAAA ACGC TTTCC TTTCTTTCCCATTCT SSU05_1921 1818251 - 1820380 + | putative alpha-1,2-mannosidase TERM 2348 1820434 - 1820395 - T 100 -16.1 -3.87075 | opp_overlap 1820400 1820404, overlap 1820400 1820404 ACCAGCTTCTACAAA CAAAAGAAATAGTCAGG ACCAAG CCTGACTATTTCTTTTA TTCACCTTGCTTTCT TERM 2349 1820400 - 1820429 + T 100 -13.8 -4.68103 | opp_overlap 1820395 1820400 1820404, overlap 1820404 CTTCTACAAACAAAA GAAATAGTCAGG ACCAAG CCTGACTATTTC TTTTATTCACCTTGC TERM 2350 1820429 - 1820400 - T 100 -13.8 -4.99043 | opp_overlap 1820400 1820404, overlap 1820395 1820404 CTTCTACAAACAAAA GAAATAGTCAGG ACCAAG CCTGACTATTTC TTTTATTCACCTTGC TERM 2351 1820404 - 1820425 + T 100 -8.8 -4.87892 | opp_overlap 1820400 1820395 1820404, overlap 1820400 TACAAACAAAAGAAA TAGTCAGG ACCAAG CCTGACTA TTTCTTTTATTCACC TERM 2352 1820425 - 1820404 - T 100 -8.8 -5.00611 | opp_overlap 1820404 1820400, overlap 1820400 1820395 TACAAACAAAAGAAA TAGTCAGG ACCAAG CCTGACTA TTTCTTTTATTCACC SSU05_1922 1824907 - 1820432 - | endo-beta-N-acetylglucosaminidase, putative TERM 2353 1825142 - 1825125 - R 100 -7.7 -5.8901 | opp_overlap 1825125 1825127 AGAGAAAACAAAAAA GAGGAAG TTTC CCTCCTC GTTGTCTTCGTTAAT SSU05_1923 1825551 - 1825153 - | hypothetical protein cysS 1826887 - 1825544 - | cysteinyl-tRNA synthetase SSU05_1925 1827850 - 1827077 - | uridine phosphorylase SSU05_1926 1828482 - 1827865 - | Serine acetyltransferase TERM 2354 1828423 - 1828440 + g 80 -2.6 -5.46706 | opp_overlap 1828423, overlap 1828425 AAGGACTTCCAAGGA GTTCCG TGCTGC CGGATC TTTTTCTTTTACAAT TERM 2355 1828527 - 1828504 - R 73 -8.9 -3.35679 | opp_overlap 1828480 1828504 1828509, overlap 1828482 1828509 TCCTTCTAGCGAGAA GACAAGTCC ATTTCG GGACTTGCC TACTTCACCATTATT SSU05_1927 1830757 - 1828538 - | polynucleotide phosphorylase/polyadenylase TERM 2356 1831351 - 1831337 - g 85 -5.7 -5.15969 | opp_overlap 1831336 CTGGAAGCTAAAAAA TTGGG AATTG CCCAA GTCTTAATCACCGCT SSU05_1928 1830959 - 1831486 + | hypothetical protein TERM 2357 1831522 - 1831495 - T 73 -3.5 -5.0916 | gap 1, opp_overlap 1831494 1831495 TTTGTAATATAAAAA CCTCCAA-TGAT ACTAA ATCGTTTGGAGG CTTTTTTAAGTTACC SSU05_1929 1831679 - 1831569 - | hypothetical protein SSU05_1930 1832632 - 1831781 - | outer surface protein SSU05_1931 1834052 - 1832589 - | pts system, sucrose-specific IIBC component TERM 2358 1832900 - 1832910 + gr 95 -5.4 -5.84011 | TAGAATCTCGTGTTA GTTG TTT CAAC TTTTTATTTTTTGTT SSU05_1932 1834980 - 1834018 - | glucokinase regulatory protein TERM 2359 1835267 - 1835225 - g 95 -7.3 -5.58074 | gap 1, overlap 1835227 GAATCAGTAAAAAAA TGGGCTA-TTCTAACTTTAA TAAG TTAAAGATAGAAATAGCCAA ATCGAAATATGATGA TERM 2360 1835265 - 1835227 - g 73 -9.9 -2.94304 | gap 1, overlap 1835225 ATCAGTAAAAAAATG GGCTA-TTCTAACTTTAA TAAG TTAAAGATAGAAATAGCC AAATCGAAATATGAT SSU05_1933 1835056 - 1835883 + | transcriptional regulator TERM 2361 1835978 - 1836009 + T 100 -8.9 -6.04953 | gap 1, opp_overlap 1835978 GAAAAAAACAAAAAA CACAGC-TCAGTAT ACAAG ATACTGGTGCTGTG TTTTTTTGTTTCTAT TERM 2362 1836009 - 1835978 - T 100 -6.7 -6.12458 | gap 1, opp_overlap 1835978 GAAAAAAACAAAAAA CACAGC-TCAGTAT ACAAG ATACTGGTGCTGTG TTTTTTTGTTTCTAT rpsO 1836303 - 1836034 - | 30S ribosomal protein S15 TERM 2363 1836115 - 1836125 + g 78 -2.4 -5.52384 | TGCCAACAAGTTACG ACGG CGA CCGA TTTTTTTCATCAAAC TERM 2364 1836467 - 1836432 - R 73 -10 -2.52464 | gap 1, opp_overlap 1836441, overlap 1836440 1836441 1836443 TTTTTTGTCAACTGA TTTGAAAACTAGCTGAG TAG CTCTGCTA-TTTTCAAA AAAAGCCAGCTTTTG TERM 2365 1836441 - 1836459 + r 73 -7.4 -4.07568 | opp_overlap 1836440 1836432 1836441 1836443 AACTGATTTGAAAAC TAGCTGAG TAG CTCTGCTA TTTTCAAAAAAAGCC TERM 2366 1836487 - 1836472 - R 91 -6.8 -5.42259 | opp_overlap 1836472 1836482 CTATTTTCAAAAAAA GCCAGC TTTT GCTGAC TTTCTGCTTGTATAT SSU05_1935 1837068 - 1836508 - | xanthine/uracil permease SSU05_1936 1837363 - 1837256 - | hypothetical protein SSU05_1937 1837811 - 1837317 - | hypothetical protein SSU05_1938 1838063 - 1837902 - | hypothetical protein SSU05_1939 1838747 - 1838217 - | hypothetical protein TERM 2367 1838570 - 1838552 - G 82 -6 -4.91712 | CCGAAGTTAGAAAAA GTGATTGG GCA CCAATTAC AATCAAAGAAACATT SSU05_1940 1839829 - 1839128 - | 16S rRNA uridine-516 pseudouridylate synthase family protein SSU05_1941 1840295 - 1839846 - | acetyltransferase TERM 2368 1840153 - 1840143 - G 77 -4.6 -5.06451 | GATGACTGCAAAAAA GCGG TCC CCAC GCGCCTCTGGTGAAA SSU05_1942 1840512 - 1840348 - | acetyltransferase TERM 2369 1840610 - 1840624 + r 77 -10 -3.2614 | opp_overlap 1840605 ACCTATACGACTGAT GCGAAC AGA GTTCGC TTCATCTCCAACCTC TERM 2370 1840643 - 1840657 + r 75 -8.6 -3.63627 | opp_overlap 1840643 ATCTCCAACCTCAAA CTGTCT CCC AGACAG TTTGAGCTGTGCGGG TERM 2371 1840657 - 1840643 - R 78 -8.6 -3.66356 | opp_overlap 1840643 ATCTCCAACCTCAAA CTGTCT CCC AGACAG TTTGAGCTGTGCGGG SSU05_1943 1842026 - 1840770 - | major facilitator superfamily permease TERM 2372 1841905 - 1841918 + g 91 -8.1 -4.88388 | opp_overlap 1841888 AGCATGGTGGATAGG GCCAG CAAA CTGGC TTTTTCTAAAATTCT TERM 2373 1842267 - 1842279 + G 71 -9.1 -3.2794 | opp_overlap 1842267 GCTGAAAAAATGAAA CTCCG TGG CGGAG TTGGTCTAGCTGCAC TERM 2374 1842279 - 1842267 - g 93 -9.1 -4.42765 | opp_overlap 1842267 GCTGAAAAAATGAAA CTCCG TGG CGGAG TTGGTCTAGCTGCAC def 1842069 - 1842683 + | peptide deformylase TERM 2375 1842725 - 1842685 - T 100 -14.3 -4.2528 | opp_overlap 1842694 1842711, overlap 1842694 TGGTAATTGAATAAA CATAAGAAACTGACTGAAA AAT TTTCGGTCAGTTTTTTATG TGAGTACGAAAAAAC TERM 2376 1842694 - 1842716 + T 100 -11.4 -5.38047 | opp_overlap 1842685 1842694, overlap 1842711 AATAAACATAAGAAA CTGACTGAAA AAT TTTCGGTCAG TTTTTTATGTGAGTA TERM 2377 1842716 - 1842694 - T 91 -9.2 -4.55908 | opp_overlap 1842694 1842711, overlap 1842685 AATAAACATAAGAAA CTGACTGAAA AAT TTTCGGTCAG TTTTTTATGTGAGTA TERM 2378 1842755 - 1842740 - T 86 -6.8 -5.1861 | opp_overlap 1842711 GTGAGTACGAAAAAA CGACCC TTTC GGATCG ATCTCAATAATAGTC SSU05_1945 1843657 - 1842872 - | putative translation factor (SUA5) TERM 2379 1843683 - 1843703 + r 71 -4.8 -4.62069 | gap 1, overlap 1843687 TCTTTTCTTTTGTTC CATAGCAGA GCGA TCTGCT-TG TTTTCTAATATTTTT TERM 2380 1843687 - 1843700 + r 76 -6.7 -4.37552 | overlap 1843683 TTCTTTTGTTCCATA GCAGA GCGA TCTGC TTGTTTTCTAATATT leuD 1844310 - 1843717 - | isopropylmalate isomerase small subunit TERM 2381 1843903 - 1843935 + g 80 -9.1 -3.94188 | AACCGTGATTTCTTG GTCAGGACCCAGCTG AGC TAGTTGGTCCCTGAC TTCTTTGGGCTGGAT SSU05_1947 1845629 - 1844310 - | 3-isopropylmalate dehydratase large subunit SSU05_1948 1846678 - 1845632 - | 3-isopropylmalate dehydrogenase SSU05_1949 1848249 - 1846687 - | 2-isopropylmalate synthase TERM 2382 1848362 - 1848325 - R 81 -5.7 -5.16841 | gap 1, opp_overlap 1848333, overlap 1848287 1848330 GTATACTAAGAAAAA GAAAACACCTCG-AGG ACTATTA CCTGCGAGATGTTGTC AACAGCGCCCGCTTG TERM 2383 1848357 - 1848330 - R 81 -4.2 -5.42605 | gap 1, opp_overlap 1848333, overlap 1848325 CTAAGAAAAAGAAAA CACCTCG-AGG ACTATTA CCTGCGAGATG TTGTCAACAGCGCCC TERM 2384 1848619 - 1848598 - R 100 -8.7 -4.76963 | CCAGATAATAGAAAA CCATGCTCC AATT GAAGCACGG TTCAGGTGTTTAATT SSU05_1950 1848943 - 1848629 - | hypothetical protein TERM 2385 1848909 - 1848888 - G 100 -11.7 -4.42386 | opp_overlap 1848891 TCCTTATTTACAAAA TAAGACTGG TCTC CCAGTCTTA TAGCATTGTTTTTAG TERM 2386 1848891 - 1848906 + g 73 -9 -3.41422 | opp_overlap 1848888 TTATTTACAAAATAA GACTGG TCTC CCAGTC TTATAGCATTGTTTT SSU05_1951 1850162 - 1848921 - | leucyl aminopeptidase (aminopeptidase T) TERM 2387 1850250 - 1850231 - R 100 -8.6 -5.77988 | AGACAGATAAAAAAA CTTCCTGC TGAT ACAGGAAG TTGAAAAGGTTAGCT TERM 2388 1850380 - 1850370 - R 78 -6.8 -4.62302 | opp_overlap 1850369 1850370 GAACAGGCTGAAAAA CTCC ACT GGAG CTTTACACTCACCAC SSU05_1952 1851037 - 1850435 - | hypothetical protein TERM 2389 1851063 - 1851073 + r 78 -5.4 -4.89852 | overlap 1851061 CTTTTCTATTTGTTA CTAC ATA GTAG TTTTTATCACTATAG TERM 2390 1851117 - 1851135 + r 73 -2.4 -5.31877 | TTATTACTAAGTAGT GTCAAATT CCT AGTCTGAC TTTTTTATACTCCGT SSU05_1953 1851947 - 1851273 - | hypothetical protein polC 1856347 - 1851956 - | DNA polymerase III PolC TERM 2391 1856445 - 1856423 - R 100 -9.2 -5.5112 | opp_overlap 1856389 1856422, overlap 1856391 1856390 GTCAGGAAGAAAAAA CTCTCAGG TTCATTT CCTGAGAG ATCTGATTTCTATAG TERM 2392 1856478 - 1856464 - R 73 -7.2 -4.04206 | TGATTTCTATAGAAA TTGGTA GCC TACCAA GCCGCAGCTTCTGTC SSU05_1955 1857461 - 1856472 - | dihydroxyacetone kinase TERM 2393 1856716 - 1856726 + g 73 -5.4 -4.74084 | TAGTCTTCCCCTTCC TTCC AGC GGAA TTTTAATTTTAATTT SSU05_1956 1857921 - 1857472 - | transcriptional regulator TERM 2394 1858876 - 1858849 - g 82 -3.4 -5.50774 | TATAAGAAAGAAAAA CTCCAACCATCT GCTA AATTGGCTGAAG AATTGGTTGAGAAAT SSU05_1957 1858168 - 1859157 + | dihydroxyacetone kinase TERM 2395 1859455 - 1859441 - g 70 -7.1 -3.78953 | ATGGGTATTACTAAA GCCAG TCAAG CTGGC GCTGATTTGGCAGAT SSU05_1958 1859168 - 1859743 + | dihydroxyacetone kinase SSU05_1959 1859740 - 1860114 + | hypothetical protein SSU05_1960 1860124 - 1860834 + | glycerol uptake facilitator and related permease (major Intrinsic protein family) TERM 2396 1861007 - 1860984 - T 81 -8.2 -4.25056 | opp_overlap 1860984 CATTTTATCAACAAA GACTTGGCTA TCAT CAACCAAGTC TTTTTCTGTTATTCA TERM 2397 1860984 - 1861007 + T 81 -5.3 -5.2015 | opp_overlap 1860984 CATTTTATCAACAAA GACTTGGCT ATCATC AACCAAGTC TTTTTCTGTTATTCA SSU05_1961 1862878 - 1861016 - | prolyl-tRNA synthetase TERM 2398 1861831 - 1861844 + g 71 -4.5 -4.66833 | opp_overlap 1861831 1861832, overlap 1861835 CTACATCAAAGAAAT CCGCT GCCA AGTGG TTTTTCAACTTGACA TERM 2399 1862927 - 1862917 - R 73 -5.4 -4.65819 | overlap 1862924 AAAACGAAACGAAAA TAGG AAA CCTA ACGCAGTGCCTTTGG SSU05_1962 1864418 - 1863159 - | membrane-associated Zn-dependent proteases 1 SSU05_1963 1865234 - 1864428 - | CDP-diglyceride synthetase TERM 2400 1864509 - 1864486 - G 72 -9.6 -3.09272 | opp_overlap 1864485 1864483 1864486 1864503 ATACCGTCAAAACGA TCCAGGATAC CACC GTGTCCTGGA ATAATTTTTCCAGAA TERM 2401 1864486 - 1864509 + g 81 -11.8 -2.53903 | opp_overlap 1864486, overlap 1864485 1864483 1864503 ATACCGTCAAAACGA TCCAGGATAC CACC GTGTCCTGGA ATAATTTTTCCAGAA TERM 2402 1864678 - 1864664 - G 74 -5 -4.81852 | overlap 1864673 CGACAATCAAGAAAA TGATAG CAA CTACCA CCGCAGAAAGAATAC SSU05_1964 1866110 - 1865244 - | undecaprenyl pyrophosphate synthase TERM 2403 1866101 - 1866087 - G 95 -5.6 -5.64304 | opp_overlap 1866087 1866087, overlap 1866080 TAATACAAGAAAAAA CCAGGG TTT CCCTCG GTTTCTCATCCTAAT SSU05_1965 1866436 - 1866152 - | hypothetical protein TERM 2404 1866415 - 1866393 - G 74 -4.8 -4.79373 | overlap 1866397 GAATAGAACATAAAA CCAATCATGG CAA CCATGACAAG TGGCAAAAATAAACC TERM 2405 1866411 - 1866397 - G 75 -8.6 -3.83346 | overlap 1866393 AGAACATAAAACCAA TCATGG CAA CCATGA CAAGTGGCAAAAATA TERM 2406 1866537 - 1866518 - R 100 -8.6 -5.22289 | opp_overlap 1866520 GACCAAACAGAAAAA GACCGAAC TTTC GTTCAGTC TTCGCACACTATTTT SSU05_1966 1867811 - 1866546 - | adenylosuccinate synthase TERM 2407 1867240 - 1867223 - G 73 -7.1 -4.09685 | opp_overlap 1867226, overlap 1867226 GGGCATCGTTCAAAA TAACAGA TGTG TCTGTTA CATACTTTTTGATTT SSU05_1967 1868203 - 1870434 + | bifunctional glutamate--cysteine ligase/glutathione synthetase TERM 2408 1870660 - 1870674 + F 78 -8.6 -3.66356 | opp_overlap 1870660 CCCGCACAGCTCAAA CTGTCT GGG AGACAG TTTGAGGTTGGAGAT TERM 2409 1870674 - 1870660 - f 75 -8.6 -3.63627 | opp_overlap 1870660 CCCGCACAGCTCAAA CTGTCT GGG AGACAG TTTGAGGTTGGAGAT TERM 2410 1870707 - 1870693 - f 74 -10 -2.6914 | overlap 1870692 GAGGTTGGAGATAAG GCGAAC TCT GTTCGC ATCAGTCGTAGAGGC TERM 2411 1871079 - 1871108 + F 80 -2.1 -5.60993 | AACAAAATGAATATG GCACCAAGAAA ATCATTTA TATCTCGGTGC TTTTTTTGTGAACCA TERM 2412 1874358 - 1874342 - g 73 -2.9 -5.11836 | ACAGTCAAAAGAAAA TCCTTCC AAA GACAGGA GGAGAAACAAGCTTT SSU05_1968 1871260 - 1874439 + | DNA nuclease TERM 2413 1874448 - 1874476 + F 100 -12.6 -4.93296 | opp_overlap 1874459 ATCCTAATCATTTTT TGAGCTTGAAAG CATGA CTTTCAGGCTCA TTTTTCTACTGCTCC TERM 2414 1874631 - 1874612 - gf 78 -4.2 -5.09204 | overlap 1874614 ACAGCCCAAGAAAAA CACGACAC CATG GCGTCGTC CACCGTTGCTCTAGG TERM 2415 1874629 - 1874614 - gf 71 -6.8 -4.16909 | overlap 1874612 AGCCCAAGAAAAACA CGACAC CATG GCGTCG TCCACCGTTGCTCTA hslO 1874519 - 1875385 + | Hsp33-like chaperonin TERM 2416 1876154 - 1876131 - gT 73 -8.9 -3.36991 | opp_overlap 1876131, overlap 1876129 CACTATCTTGAAACA GGAGAAGTC CTACCC GACCTCTCC TTTGACGACAAACTC SSU05_1970 1875348 - 1876382 + | tRNA-dihydrouridine synthase TERM 2417 1876514 - 1876495 - T 91 -9.3 -4.371 | opp_overlap 1876495 TCGACTATATCAAAA CCTCCAG TTTGAG CTGGAGG TTTCTTTATCTTTTT TERM 2418 1876495 - 1876514 + T 100 -10 -4.7908 | opp_overlap 1876495 TCGACTATATCAAAA CCTCCAGT TTGA GCTGGAGG TTTCTTTATCTTTTT SSU05_1971 1877301 - 1876528 - | hypothetical protein TERM 2419 1877002 - 1877022 + g 89 -7.5 -4.92669 | opp_overlap 1877000 TTGCTCGATATGATT GCGGGGC AAATCCA GTCCCGC TTCTTTTTTTATCTC SSU05_1972 1878115 - 1877294 - | nicotinamide mononucleotide transporter SSU05_1973 1878886 - 1878125 - | hypothetical protein SSU05_1974 1879163 - 1878864 - | transcriptional regulator TERM 2420 1879027 - 1879038 + g 71 -4.4 -4.82901 | opp_overlap 1879012 CCGAGACCAATCTGA TGAC CACG GTCA TTTTTATAGCCCGAC TERM 2421 1879285 - 1879271 - R 100 -10 -4.90525 | opp_overlap 1879271 CAAGCCGAAAGAAAA GCAGGT CTA ACCTGC TTTCACACTATCAAA TERM 2422 1879271 - 1879285 + r 80 -10 -3.59262 | opp_overlap 1879271 CAAGCCGAAAGAAAA GCAGGT CTA ACCTGC TTTCACACTATCAAA SSU05_1975 1881730 - 1879277 - | ATPases with chaperone activity, ATP-binding subunit TERM 2423 1880012 - 1879995 - G 70 -5.6 -4.3586 | TCACTCATATCAAAA CGAATC AAGGCA GATTCG TCATCAAAGAGGATC SSU05_1976 1882194 - 1881736 - | transcriptional regulator CtsR SSU05_1977 1882344 - 1882682 + | putative bacterocin transport accessory protein, Bta SSU05_1978 1882682 - 1883383 + | hypothetical protein TERM 2424 1883411 - 1883390 - T 100 -13.7 -5.16151 | opp_overlap 1883390 GAAATCTAACAAAAA GCACCGACC ACAA GGCCGGTGC TTTTTAAGGAGATTA TERM 2425 1883390 - 1883411 + T 95 -11.5 -4.58283 | opp_overlap 1883390 GAAATCTAACAAAAA GCACCGACC ACAA GGCCGGTGC TTTTTAAGGAGATTA TERM 2426 1883527 - 1883508 - T 100 -8.6 -5.0133 | opp_overlap 1883508 1883511 GATTTTGCCAAAAAA GAACTCCC TTTC GGAAGTTC TTGTGATTTTGAATA tsf 1884686 - 1883646 - | elongation factor Ts TERM 2427 1883686 - 1883705 + g 83 -9.4 -3.93583 | GTCGCTGCAACTTCT GCTTCAAA GTCG TTTGAAGC TTTCTCGATACCTTC TERM 2428 1883875 - 1883896 + g 87 -5.1 -5.42265 | overlap 1883876 1883892 AAGCGATCCATTTTA CCTGGGATG ATTT TATCCCAGA TTTTTTCTGGTTTGC TERM 2429 1883876 - 1883895 + g 75 -8.6 -3.83732 | overlap 1883875 1883892 AGCGATCCATTTTAC CTGGGATG ATTT TATCCCAG ATTTTTTCTGGTTTG TERM 2430 1884227 - 1884244 + g 74 -4.1 -5.00616 | opp_overlap 1884226 TATGTTGGTAAGCAC CAAATGC TTGA GCATCTG TTTTTTCAACCAAAG TERM 2431 1884715 - 1884746 + r 72 -9.4 -2.59484 | gap 1, opp_overlap 1884716, overlap 1884714 1884713 GTTTGTATTTATAAA ATAGAGGAGC-GGGC TCA GCCCTGCCCCTCTAG GATTGTTTTTGTGTC TERM 2432 1884745 - 1884716 - R 100 -15.1 -4.42386 | gap 1, opp_overlap 1884715 1884714 1884713 TTTGTATTTATAAAA TAGAGGAGC-GGGC TCA GCCCTGCCCCTCTA GGATTGTTTTTGTGT SSU05_1980 1885744 - 1884842 - | 30S ribosomal protein S2 TERM 2433 1885889 - 1885921 + r 87 -11.4 -3.50734 | opp_overlap 1885891, overlap 1885885 1885891 TTTCTTAGAAATAGA AAGGAAGTAACGCC TATCT GGTGTTACTTCCTC TTAGTTGTATCCCTT TERM 2434 1885891 - 1885919 + r 100 -14 -3.32023 | opp_overlap 1885891, overlap 1885889 1885885 TCTTAGAAATAGAAA GGAAGTAACGCC TATCT GGTGTTACTTCC TCTTAGTTGTATCCC TERM 2435 1885919 - 1885891 - R 95 -11.8 -4.40003 | opp_overlap 1885891 1885889 1885885 TCTTAGAAATAGAAA GGAAGTAACGCC TATCT GGTGTTACTTCC TCTTAGTTGTATCCC SSU05_1981 1886477 - 1885965 - | hypothetical protein TERM 2436 1886004 - 1886021 + g 70 -2.7 -5.06103 | opp_overlap 1886004, overlap 1886007 ACTCTCATCAATCCA TAGGATG TTTG CATCATA TTTTTTCGCCCTTCT TERM 2437 1886240 - 1886227 - G 74 -6.7 -4.4078 | TTTGCCCAATCAAAA GGGAT ATAG ATCCC TTCAACAATAAGGTT TERM 2438 1887096 - 1887133 + r 86 -10.1 -4.25859 | opp_overlap 1887096 1887106, overlap 1887106 TACCGCCTTTTAATA TTCTAAAAAACCTAGGA ATCT TCCTAGGTTTTTTACTA TTCTTTTCGCTTCAA TERM 2439 1887133 - 1887096 - R 76 -10.1 -3.01924 | opp_overlap 1887096 1887106, overlap 1887106 TACCGCCTTTTAATA TTCTAAAAAACCTAGGA ATCT TCCTAGGTTTTTTACTA TTCTTTTCGCTTCAA TERM 2440 1887123 - 1887106 - R 100 -9.9 -5.09173 | opp_overlap 1887096 1887106, overlap 1887096 TAATATTCTAAAAAA CCTAGGA ATCT TCCTAGG TTTTTTACTATTCTT TERM 2441 1887106 - 1887123 + r 100 -9.9 -5.31545 | opp_overlap 1887106 1887096, overlap 1887096 TAATATTCTAAAAAA CCTAGGA ATCT TCCTAGG TTTTTTACTATTCTT SSU05_1982 1892209 - 1887131 - | subtilisin-like serine protease TERM 2442 1887647 - 1887679 + g 70 -2.9 -5.04356 | gap 2, overlap 1887647 1887673 TTTGACTGTATCCCC GTCTTTCAGACTATG TAGCT CATAG-C-GAAAGGC TTTTTCATTATTTCC TERM 2443 1890234 - 1890223 - G 75 -5.8 -4.63218 | overlap 1890224 TCCGTGGCAATAAAA GTGC GCTG GCAC CCGCCACAATTGGCG TERM 2444 1892340 - 1892323 - R 100 -9.1 -5.51353 | opp_overlap 1892323 CAAAAACAAGAAAAA GCACAGG CTTC CCTGCGC TTTAACAACTTATTA nusG 1892892 - 1892353 - | transcription antitermination protein NusG secE 1893178 - 1893002 - | preprotein translocase subunit SecE SSU05_1985 1895587 - 1893374 - | penicillin-binding protein 2A TERM 2445 1896375 - 1896391 + G 83 -10.9 -3.54408 | opp_overlap 1896375, overlap 1896371 GCTTTCTGGGGAAAA TGGCAGA GCT TCTGCCA TTGATTTCGATAAGG TERM 2446 1896391 - 1896375 - g 90 -10.9 -4.07568 | opp_overlap 1896371 1896375 GCTTTCTGGGGAAAA TGGCAGA GCT TCTGCCA TTGATTTCGATAAGG TERM 2447 1896693 - 1896679 - g 70 -2.8 -5.01042 | AATCCAAACGAAAAA GTGC AACCCAA GCAC TCAACCAGCCTATAA SSU05_1986 1895740 - 1896708 + | thioredoxin reductase SSU05_1987 1896710 - 1897576 + | pseudouridylate synthase, 23S RNA-specific TERM 2448 1897561 - 1897596 + T 77 -9.9 -3.19509 | opp_overlap 1897570, overlap 1897562 1897570 GAGTTTTGAAAGAAT AGTAAAAAAGAGCTG AAAAAC CAGCTCTTTTTTGCA TGTATGTTATTCAAA TERM 2449 1897562 - 1897595 + T 87 -13.4 -2.51223 | opp_overlap 1897570, overlap 1897561 1897570 AGTTTTGAAAGAATA GTAAAAAAGAGCTG AAAAAC CAGCTCTTTTTTGC ATGTATGTTATTCAA TERM 2450 1897587 - 1897570 - T 95 -7.7 -5.31545 | opp_overlap 1897562 1897561 1897570 AAGAATAGTAAAAAA GAGCTGA AAAA CCAGCTC TTTTTTGCATGTATG TERM 2451 1897570 - 1897587 + T 90 -7 -5.14477 | opp_overlap 1897570, overlap 1897562 1897561 AAGAATAGTAAAAAA GAGCTG AAAAAC CAGCTC TTTTTTGCATGTATG SSU05_1988 1898145 - 1897603 - | purine operon repressor TERM 2452 1897782 - 1897792 + g 70 -5.4 -4.57569 | TAATCATACCATTGA TGGT GCC ACCA TTTTTCAAGAAGTCA SSU05_1989 1899382 - 1898516 - | aminoglycoside phosphotransferase TERM 2453 1898955 - 1898977 + g 74 -7 -4.35091 | opp_overlap 1898955, overlap 1898956 TTTGGATAGGAATGA CTAGCTGCTT GGT AGGCAGCTAA TTTATTGTCAATCTT TERM 2454 1898956 - 1898976 + g 77 -10.5 -3.1997 | opp_overlap 1898955, overlap 1898955 TTGGATAGGAATGAC TAGCTGCTT GGT AGGCAGCTA ATTTATTGTCAATCT SSU05_1990 1900335 - 1899382 - | HD-superfamily hydrolase SSU05_1991 1901551 - 1900313 - | hypothetical protein TERM 2455 1901483 - 1901467 - G 76 -7.9 -4.09685 | opp_overlap 1901466 1901465 CTTGATCTTGCAAAA GCAGGGC CAA GCTCTGC CATTTTCCATAAAGA SSU05_1992 1902184 - 1901552 - | thiamine pyrophosphokinase SSU05_1993 1902836 - 1902177 - | Pentose-5-phosphate-3-epimerase SSU05_1994 1903726 - 1902851 - | ribosome-associated GTPase TERM 2456 1903894 - 1903922 + r 95 -13.3 -3.12351 | opp_overlap 1903901, overlap 1903901 TCCCACCCCCGCACA GCTCAAACTGTCT GGG AGACAGTTTGAGG TTGGATATAAAGCGA TERM 2457 1903915 - 1903901 - R 75 -8.6 -3.63627 | opp_overlap 1903901 1903894 CCCGCACAGCTCAAA CTGTCT GGG AGACAG TTTGAGGTTGGATAT TERM 2458 1903901 - 1903915 + r 78 -8.6 -3.67417 | opp_overlap 1903901, overlap 1903894 CCCGCACAGCTCAAA CTGTCT GGG AGACAG TTTGAGGTTGGATAT TERM 2459 1903948 - 1903934 - R 86 -10 -4.0371 | GAGGTTGGATATAAA GCGAAC TTT GTTCGC AACAGTCGTAATGGT TERM 2460 1904216 - 1904248 + r 93 -7.7 -5.12474 | opp_overlap 1904211 1904219, overlap 1904217 GCATGATAAATGGAG AGACCCCAAGTCA AAGTTGA TGACTTGGGGGCA TTTTTATATCTTCTC TERM 2461 1904217 - 1904247 + r 88 -11.2 -3.65858 | opp_overlap 1904211 1904219, overlap 1904216 CATGATAAATGGAGA GACCCCAAGTCA AAGTTGA TGACTTGGGGGC ATTTTTATATCTTCT TERM 2462 1904245 - 1904219 - R 85 -12.4 -2.99546 | opp_overlap 1904217 1904216, overlap 1904211 TGATAAATGGAGAGA CCCCAAGTCA AAGTTGA TGACTTGGGG GCATTTTTATATCTT TERM 2463 1904327 - 1904293 - R 84 -10.1 -3.64947 | opp_overlap 1904304, overlap 1904291 1904296 AAAATCAAAAACAGA CTAGCTCCAAAGGTT TTGGG AACCTTTGGAGGTTG GAAATAGAGCGAACG TERM 2464 1904324 - 1904296 - R 77 -10.4 -2.90234 | opp_overlap 1904304, overlap 1904293 1904291 ATCAAAAACAGACTA GCTCCAAAGGTT TTGGG AACCTTTGGAGG TTGGAAATAGAGCGA TERM 2465 1904337 - 1904349 + r 76 -7.7 -4.05446 | opp_overlap 1904337 1904336 1904332 AGGTTGGAAATAGAG CGAAC GTA GTTCG TTTCTACTTACGCAG TERM 2466 1904458 - 1904401 - R 74 -10 -2.59569 | gap 2, overlap 1904400 1904416 GTTTCAAAGGAACAG GCTGGGAGTGGGAA-A-GAACTCGACCA TTCA TAGAAGAGTTCGTCTTCCCACCCCCCGC ACAGTTGATTAGGTC SSU05_1995 1906200 - 1904623 - | multidrug ABC transporter, ATP-binding protein TERM 2467 1905196 - 1905213 + g 100 -9.9 -4.56597 | CTCAAACGCTACGGT CAGGTCT TCAA AGACCTG TTTTTCACCGACAGC SSU05_1996 1907444 - 1906197 - | metallo cofactor biosynthesis protein TERM 2468 1907096 - 1907083 - G 71 -6.7 -4.08216 | CCAGCTTCCTTAAAA CAGTG TGTA CACTG TAAATGACATTTATT SSU05_1997 1908670 - 1907807 - | transcriptional regulator TERM 2469 1908940 - 1908896 - R 100 -10.1 -4.72729 | overlap 1908897 1908899 1908901 CAACGAAAATCAAAA GTAGACCACCTTCAACTATCT TCC AGATAGTTGAAGGTGGAAAAT ACAAAACAATGTTTG TERM 2470 1908939 - 1908897 - R 100 -13.6 -3.4201 | overlap 1908896 1908899 1908901 AACGAAAATCAAAAG TAGACCACCTTCAACTATCT TCC AGATAGTTGAAGGTGGAAAA TACAAAACAATGTTT TERM 2471 1908937 - 1908899 - R 100 -16.2 -3.25595 | overlap 1908897 1908896 1908901 CGAAAATCAAAAGTA GACCACCTTCAACTATCT TCC AGATAGTTGAAGGTGGAA AATACAAAACAATGT TERM 2472 1908935 - 1908901 - R 100 -23.2 -3.17218 | overlap 1908899 1908897 1908896 AAAATCAAAAGTAGA CCACCTTCAACTATCT TCC AGATAGTTGAAGGTGG AAAATACAAAACAAT TERM 2473 1909151 - 1909130 - R 100 -10.9 -5.42975 | opp_overlap 1909128 1909134 1909144 TCACATAAAGAAAAA CCAAGCCAG CTAT CTGACTTGG TCGTGATTTTATTCT SSU05_1998 1911604 - 1909160 - | phosphoglycerol transferase/alkaline phosphatase superfamily protein SSU05_1999 1912318 - 1911617 - | major facilitator superfamily permease SSU05_2000 1913346 - 1912294 - | major facilitator superfamily permease TERM 2474 1913308 - 1913296 - G 100 -4.1 -6.04324 | overlap 1913298 CGAAAAAAGAAAAAA TACAG TTA CTGCA ACAATATCTGGATGC TERM 2475 1913318 - 1913298 - G 71 -4.7 -4.6155 | overlap 1913296 AAAAAAGAAAAAATA CAGTTACTG CAA CAATATCTG GATGCTTTTTCAGTA TERM 2476 1913362 - 1913384 + r 74 -4.8 -4.83169 | opp_overlap 1913367, overlap 1913365 1913367 AAGATACCTTCATAA AAAAAGAGGG AAC CCCTCTCTTG TTTTTGTAAGAACCT TERM 2477 1913365 - 1913381 + r 76 -6.5 -4.52873 | opp_overlap 1913367, overlap 1913362 1913367 ATACCTTCATAAAAA AAGAGGG AAC CCCTCTC TTGTTTTTGTAAGAA TERM 2478 1913379 - 1913367 - R 100 -9.1 -5.61596 | opp_overlap 1913365 1913362 1913367 ACCTTCATAAAAAAA GAGGG AAC CCCTC TCTTGTTTTTGTAAG TERM 2479 1913367 - 1913379 + r 80 -9.1 -3.86816 | opp_overlap 1913367, overlap 1913365 1913362 ACCTTCATAAAAAAA GAGGG AAC CCCTC TCTTGTTTTTGTAAG TERM 2480 1913705 - 1913676 - R 100 -13.1 -4.72007 | opp_overlap 1913675 1913676 1913678 TTCCATTAAAATAAA TATTGATTGCAGA TTTC TCCGCAATCAATA CTTGCTTATAAACCA TERM 2481 1913676 - 1913705 + r 78 -10.9 -2.66274 | opp_overlap 1913676, overlap 1913675 1913678 TTCCATTAAAATAAA TATTGATTGCAGA TTTC TCCGCAATCAATA CTTGCTTATAAACCA ksgA 1914619 - 1913711 - | dimethyladenosine transferase SSU05_2002 1914896 - 1914603 - | hypothetical protein TERM 2482 1914677 - 1914695 + gr 91 -4.7 -5.63517 | TGTCCAGCTGTTTTT CTAAATA ATTGG TATTTAG TTTTTTCTTTCGAGC SSU05_2003 1915134 - 1914871 - | hypothetical protein SSU05_2004 1915673 - 1915407 - | antitoxin of toxin-antitoxin stability system TERM 2483 1915741 - 1915716 - R 88 -5.6 -5.74122 | gap 1, opp_overlap 1915716 TAGCATAGAAAAAAA GAGTTGT-CAA ACTTA TTGTACAACTC TTTAACGATTCTCCA SSU05_2005 1915922 - 1915743 - | NTP pyrophosphohydrolase including oxidative damage repair enzymes SSU05_2006 1915995 - 1915897 - | hypothetical protein SSU05_2007 1916552 - 1916208 - | hypothetical protein SSU05_2008 1916667 - 1916527 - | hypothetical protein TERM 2484 1916901 - 1916880 - R 95 -8.1 -5.055 | opp_overlap 1916878 GCAATTTTCAAAAAA GCAGAAATA GTAA TATTTCCGC TCTAGATTGCCTATC SSU05_2009 1917304 - 1916912 - | hypothetical protein SSU05_2010 1917863 - 1917273 - | small primase-like protein SSU05_2011 1918609 - 1917839 - | Mg-dependent DNase TERM 2485 1918696 - 1918673 - R 100 -8.2 -5.89921 | opp_overlap 1918673 1918672 ATGAGAAGAAAAAAA CCAGCAGA CTCGAGTT TCTGCTGG CTTCTCTTTTCATCT SSU05_2012 1918806 - 1918714 - | hypothetical protein TERM 2486 1919022 - 1919010 - R 79 -4.8 -5.13521 | opp_overlap 1919010 AAATCATTGAAAAAA GAGG ACTAG CCTC TTTTTAATCATGATT TERM 2487 1919010 - 1919022 + r 74 -4.8 -4.7871 | opp_overlap 1919010 AAATCATTGAAAAAA GAGG ACTAG CCTC TTTTTAATCATGATT SSU05_2013 1920108 - 1919026 - | RNA-binding protein SSU05_2014 1920853 - 1920041 - | hypothetical protein rnpA 1921238 - 1920837 - | ribonuclease P TERM 2488 1921250 - 1921274 + r 83 -7.2 -4.78149 | opp_overlap 1921250 ACAAAATTCAAAAAA GCCAATAAAC ATACC GTTTATAGGC TTTTTGCGTTCTGAA TERM 2489 1921274 - 1921250 - R 95 -7.9 -5.28315 | opp_overlap 1921250 ACAAAATTCAAAAAA GCCAATAAACA TAC CGTTTATAGGC TTTTTGCGTTCTGAA SSU05_2016 1922661 - 1921267 - | argininosuccinate lyase SSU05_2017 1923898 - 1922675 - | argininosuccinate synthase TERM 2490 1924033 - 1924014 - R 100 -8.6 -5.4477 | opp_overlap 1924014 AAATTTCCAAAAAAA GCTAGAGA ATAT TCTCCAGC TTCTAAAATATATTC SSU05_2018 1924224 - 1924063 - | hypothetical protein SSU05_2019 1924500 - 1924234 - | hypothetical protein TERM 2491 1924649 - 1924676 + r 91 -9.2 -4.48176 | opp_overlap 1924649 1924650, overlap 1924650 GATTATAAAACAAAA CCTTACAGGTGT CAAG ACGCCTGTAAGA TTTATTAATTTTCTA TERM 2492 1924676 - 1924649 - R 100 -9.2 -5.20781 | opp_overlap 1924649 1924650, overlap 1924650 GATTATAAAACAAAA CCTTACAGGTGT CAAG ACGCCTGTAAGA TTTATTAATTTTCTA TERM 2493 1924650 - 1924675 + r 90 -12.7 -3.27279 | opp_overlap 1924649 1924650, overlap 1924649 ATTATAAAACAAAAC CTTACAGGTGT CAAG ACGCCTGTAAG ATTTATTAATTTTCT TERM 2494 1924675 - 1924650 - R 86 -10.5 -3.70842 | opp_overlap 1924650 1924649, overlap 1924649 ATTATAAAACAAAAC CTTACAGGTGT CAAG ACGCCTGTAAG ATTTATTAATTTTCT SSU05_2020 1925112 - 1924681 - | small molecule binding protein TERM 2495 1925301 - 1925279 - R 100 -10.6 -4.74103 | opp_overlap 1925279 TCCTCAACCCAAAAA CGGAAACTGC AGA ACAGTCTCCG TTATCATCTGCTAGT SSU05_2021 1926226 - 1925312 - | hypothetical protein SSU05_2023 1926710 - 1926576 - | hypothetical protein SSU05_2022 1926294 - 1926794 + | NTP pyrophosphohydrolase including oxidative damage repair enzymes TERM 2496 1926810 - 1926841 + Tr 71 -4.2 -4.87133 | opp_overlap 1926813 1926814, overlap 1926811 1926813 1926814 ATTCCCCTAACAGAC AAATCCCCGCCGTC ACAG GACAGCGGGGCTCC TTTTATTTCAAACCT TERM 2497 1926813 - 1926838 + Tr 80 -10.3 -3.32684 | opp_overlap 1926813 1926814, overlap 1926811 1926810 1926814 CCCCTAACAGACAAA TCCCCGCCGTC ACAG GACAGCGGGGC TCCTTTTATTTCAAA TERM 2498 1926838 - 1926813 - TR 95 -12.5 -4.2074 | opp_overlap 1926813 1926811 1926810 1926814, overlap 1926814 CCCCTAACAGACAAA TCCCCGCCGTC ACAG GACAGCGGGGC TCCTTTTATTTCAAA TERM 2499 1926814 - 1926837 + Tr 93 -13.8 -2.58887 | opp_overlap 1926813 1926814, overlap 1926813 1926811 1926810 CCCTAACAGACAAAT CCCCGCCGTC ACAG GACAGCGGGG CTCCTTTTATTTCAA TERM 2500 1926837 - 1926814 - TR 100 -16 -3.11962 | opp_overlap 1926814 1926813 1926811 1926810, overlap 1926813 CCCTAACAGACAAAT CCCCGCCGTC ACAG GACAGCGGGG CTCCTTTTATTTCAA mmuM 1927791 - 1926844 - | homocysteine methyltransferase SSU05_2025 1928634 - 1927804 - | amino acid permease TERM 2501 1927944 - 1927932 - GR 70 -5.5 -4.48997 | TAACCAACAAAACAA CCGTA ATC CACGG CAAGGTTGGTGAGAA SSU05_2026 1929181 - 1928573 - | amino acid permease TERM 2502 1928912 - 1928900 - GR 74 -7.7 -3.9712 | CCAGGCCACCATAAA TCCTG TTC CAGGA CTGATAAACTTGGTC TERM 2503 1929309 - 1929284 - R 100 -13.3 -4.04209 | opp_overlap 1929284 TCAAACTATGACAAA TCCCCACCGCC ATAT GACAGTGGGGA TTATTTCATTACAAA TERM 2504 1929284 - 1929309 + r 81 -8.9 -4.0825 | opp_overlap 1929284 TCAAACTATGACAAA TCCCCACCGCC ATAT GACAGTGGGGA TTATTTCATTACAAA gltX 1930712 - 1929318 - | glutamyl-tRNA synthetase TERM 2505 1929644 - 1929632 - G 71 -4.1 -4.86822 | overlap 1929643 AATCAGAGAAGAAAA GGTCT GTC AAACC AACGATTTCATCCGC TERM 2506 1930325 - 1930351 + g 77 -3.7 -5.1861 | gap 2, overlap 1930327 TTGGGACAATGCCAG CCGCCT-CA-CGC TCT GCGATGTAGGCAG TTTTTTCATCCTCAG TERM 2507 1930842 - 1930859 + r 81 -8.5 -4.24338 | opp_overlap 1930842, overlap 1930834 AAGAAAACAGAAAAA TCAGTCT AAAC AGACTGA TTTTGAGGTGTTTTT TERM 2508 1930859 - 1930842 - R 100 -8.5 -5.34632 | opp_overlap 1930842 1930834 AAGAAAACAGAAAAA TCAGTCT AAAC AGACTGA TTTTGAGGTGTTTTT SSU05_2028 1932127 - 1930847 - | lantibiotic efflux protein TERM 2509 1931207 - 1931189 - G 74 -9.6 -3.2756 | opp_overlap 1931204 1931206, overlap 1931193 1931194 AACGCCAAGAAGAGA GAAAGTGG CTG CCACTTCC AGCGTCACCATGCTG TERM 2510 1931203 - 1931193 - G 74 -6.8 -4.28067 | overlap 1931189 1931194 CCAAGAAGAGAGAAA GTGG CTG CCAC TTCCAGCGTCACCAT TERM 2511 1931204 - 1931225 + g 70 -5.1 -4.57073 | opp_overlap 1931189 1931194, overlap 1931206 GAAAGTGGCTGCCAC TTCCAGCGT CACC ATGCTGGTA TTTTTGAAAAGGGTA TERM 2512 1931206 - 1931223 + g 72 -7.7 -3.90048 | opp_overlap 1931189 1931194, overlap 1931204 AAGTGGCTGCCACTT CCAGCGT CACC ATGCTGG TATTTTTGAAAAGGG TERM 2513 1932154 - 1932167 + r 86 -5.3 -5.31275 | TCTTTTGATTAATTT TCAGA ATAT TCTGA TTTTTTGTCCTACAG SSU05_2029 1932879 - 1932256 - | hypothetical protein SSU05_2030 1933372 - 1932884 - | response regulator TERM 2514 1933437 - 1933467 + r 100 -10.5 -5.25699 | opp_overlap 1933441, overlap 1933441 TAAAAATAAACTAAA AAAAGTCCCTTGC TTTAC GCGAGGGACTTTA TTTTTATTATATGAT TERM 2515 1933441 - 1933463 + r 100 -11.3 -5.09221 | opp_overlap 1933441, overlap 1933437 AATAAACTAAAAAAA GTCCCTTGC TTTAC GCGAGGGAC TTTATTTTTATTATA TERM 2516 1933463 - 1933441 - R 100 -9.1 -5.77856 | opp_overlap 1933441 1933437 AATAAACTAAAAAAA GTCCCTTGC TTTAC GCGAGGGAC TTTATTTTTATTATA SSU05_2031 1934266 - 1933508 - | hypothetical protein SSU05_2032 1934968 - 1934474 - | hypothetical protein TERM 2517 1935010 - 1934992 - R 73 -9 -3.40403 | opp_overlap 1934992 CTTGTCTGATGAGAA TTTCTGAA ATT TTCAGAAA TAGGTTAGACCTAGC SSU05_2033 1936459 - 1935092 - | DNA repair protein RadA SSU05_2034 1936992 - 1936621 - | fructose-2,6-bisphosphatase dut 1937442 - 1936999 - | deoxyuridine 5'-triphosphate nucleotidohydrolase TERM 2518 1937538 - 1937519 - R 73 -5.6 -4.67641 | opp_overlap 1937519, overlap 1937514 1937521 AGGCTAAAAGCAAAA CTCCAACC TAGT GGCTGGGG TTTTCAACTTTATTC SSU05_2036 1938186 - 1937548 - | ABC-type multidrug transport system, ATPase and permease component SSU05_2037 1939331 - 1938138 - | ABC-type multidrug transport system, ATPase and permease component TERM 2519 1939140 - 1939123 - GR 88 -9.9 -4.10007 | opp_overlap 1939127 1939128, overlap 1939126 ATAACCCCGTTAAAA TCAGCCA TGTC TGGCTGA AAGTCAGCCTGACCA SSU05_2038 1941038 - 1939332 - | putative ABC transporter ATP-binding protein SSU05_2039 1941480 - 1941031 - | transcriptional regulator TERM 2520 1942036 - 1942026 - g 71 -6.8 -4.09864 | ATGCACGCTTCAAAA GGCT TAG AGCC TGATAGTCACAAGCG TERM 2521 1942702 - 1942678 - g 73 -5.7 -4.49958 | ATGCCATCAAAGAAA TCATGACGG GTGAATT CCGACATGA AAATGAATGGCATTG gpsA 1941702 - 1942718 + | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase TERM 2522 1943373 - 1943354 - g 74 -5 -4.77757 | overlap 1943349 1943355 GTGGAAAAACCAAAA CCAGAAGA CGCT CCTTCTGA CCTTGCTATTATCGG TERM 2523 1943448 - 1943438 - g 80 -4.6 -5.1417 | TTAGAAAACCAAAAA CCAG GTG CCGG GAACGAGATTCAATT SSU05_2041 1942763 - 1943662 + | glucose-1-phosphate-uridylyltransferase TERM 2524 1943678 - 1943653 - T 78 -7.7 -4.19927 | opp_overlap 1943653 1943659, overlap 1943659 AAAATTAGATACAAA GAAAAACTAGC AAGC GCTAGTTTTTT CTTATGTCAAATAAA TERM 2525 1943659 - 1943672 + T 93 -6.7 -5.60689 | opp_overlap 1943653 1943659, overlap 1943653 AGATACAAAGAAAAA CTAGC AAGC GCTAG TTTTTTCTTATGTCA TERM 2526 1943672 - 1943659 - T 93 -6.7 -5.4433 | opp_overlap 1943659 1943653, overlap 1943653 AGATACAAAGAAAAA CTAGC AAGC GCTAG TTTTTTCTTATGTCA SSU05_2042 1944357 - 1943680 - | hypothetical protein SSU05_2043 1944883 - 1944341 - | putative 5-formyltetrahydrofolate cyclo-ligase TERM 2527 1944909 - 1944924 + r 70 -9 -3.08604 | opp_overlap 1944890 1944889 1944909, overlap 1944907 1944906 TTCTTTTCAGAAAAA GACTGG AAAA CCAGTC TAGTTTGCTTTCATT TERM 2528 1944924 - 1944909 - R 100 -9 -4.82901 | opp_overlap 1944909 1944907 1944906, overlap 1944890 1944889 TTCTTTTCAGAAAAA GACTGG AAAA CCAGTC TAGTTTGCTTTCATT SSU05_2044 1946051 - 1944924 - | hippurate hydrolase-like protein TERM 2529 1945334 - 1945324 - G 86 -6.8 -5.00616 | GTGCCGTGCAAAAAA GCTG TTT CAGC AATAACATTATTGGT SSU05_2046 1946357 - 1946061 - | tetrahydrodipicolinate N-succinyltransferase SSU05_2047 1946760 - 1946341 - | 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase, putative SSU05_2045 1946182 - 1946868 + | hypothetical protein SSU05_2048 1947503 - 1947036 - | hypothetical protein SSU05_2049 1948038 - 1947490 - | hypothetical protein TERM 2530 1948124 - 1948089 - R 76 -4.9 -4.98255 | overlap 1948097 TGTCAAGTAGAAAAA CAAAAAAATTAGAAG TTTTAC CTCCTAATTTTCATG TATTATCTTAATCTT TERM 2531 1948116 - 1948097 - R 100 -2.9 -6.23317 | overlap 1948089 AGAAAAACAAAAAAA TTAGAAG TTTTAC CTCCTAA TTTTCATGTATTATC SSU05_2050 1948902 - 1948132 - | Serine/threonine protein phosphatase TERM 2532 1948262 - 1948277 + g 70 -7.6 -3.68351 | ATCCCCATTTTCCCA TCTGGA CTGG TCCAGA TTTGGCTAATGCGGA TERM 2533 1948927 - 1948910 - R 95 -7.7 -5.39681 | opp_overlap 1948910 ATAAGCAAAGAAAAA CTGACCG TTTC CGATCAG TTTGGTTTTCTTACA pgi 1950362 - 1948938 - | glucose-6-phosphate isomerase TERM 2534 1950314 - 1950333 + g 89 -6.6 -5.40474 | opp_overlap 1950314 ATTTATGTACCATAA TATGATAA CGCT TTATCATA TTTTTTTCAAGAAAT SSU05_2052 1950910 - 1950392 - | hypothetical protein TERM 2535 1951038 - 1951013 - R 95 -8.4 -4.94962 | opp_overlap 1951013 ATAAGCCAAAGAAAA CCCTCTGAAA GCCTGA TTTCAAAGGG TTCTTAGATTATACG SSU05_2053 1951702 - 1951181 - | cytosine/adenosine deaminase TERM 2536 1951865 - 1951844 - R 100 -9.5 -5.36364 | TTAAAAATATAAAAA TACCTCCTC AGTC GAGAAGGTA GGGGGAGCAATATTG TERM 2537 1951973 - 1951942 - R 93 -6.6 -5.4477 | opp_overlap 1951942 1951942 1951950 1951952, overlap 1951930 1951943 1951950 AAATTTTTAAAAAAA TTCAAAAACAGCCT CGAA AGGCTGTATCTGAC ATTTTCTATTACAAT TERM 2538 1951972 - 1951943 - R 85 -10.1 -3.85235 | opp_overlap 1951942 1951942 1951950 1951952, overlap 1951930 1951942 1951950 AATTTTTAAAAAAAT TCAAAAACAGCCT CGAA AGGCTGTATCTGA CATTTTCTATTACAA TERM 2539 1951950 - 1951965 + r 70 -9 -2.95339 | opp_overlap 1951943 1951942 1951950, overlap 1951942 1951942 1951952 AAAAAAATTCAAAAA CAGCCT CGAA AGGCTG TATCTGACATTTTCT TERM 2540 1951965 - 1951950 - R 100 -9 -4.97888 | opp_overlap 1951950 1951942 1951942 1951952, overlap 1951943 1951942 AAAAAAATTCAAAAA CAGCCT CGAA AGGCTG TATCTGACATTTTCT SSU05_2054 1954096 - 1951982 - | transketolase TERM 2541 1954070 - 1954048 - G 79 -7.7 -4.37092 | gap 1, overlap 1954050 ATTGTCCGTAGAAAA GAGGCAGGAC TTTC GTCCCGCC-C TTGGAGTGAACAGTA TERM 2542 1954069 - 1954050 - G 95 -11.4 -3.79419 | overlap 1954048 TGTCCGTAGAAAAGA GGCAGGAC TTTC GTCCCGCC CTTGGAGTGAACAGT SSU05_2055 1955254 - 1954163 - | putative L-ascorbate 6-phosphate lactonase TERM 2543 1955344 - 1955333 - R 74 -4.4 -5.00923 | overlap 1955335 1955338 AAAGACCAAATAAAA CACA GGCT TGTG TTCAAACTTGGACTT SSU05_2056 1957052 - 1955364 - | transcriptional antiterminator SSU05_2057 1957809 - 1957177 - | hypothetical protein araD 1958595 - 1957879 - | L-ribulose-5-phosphate 4-epimerase SSU05_2059 1959458 - 1958595 - | putative L-xylulose 5-phosphate 3-epimerase ulaD 1960126 - 1959464 - | 3-keto-L-gulonate-6-phosphate decarboxylase SSU05_2061 1960622 - 1960137 - | phosphotransferase system mannitol/fructose-specific IIA domain-containing protein TERM 2544 1960674 - 1960652 - R 100 -13.4 -3.84266 | opp_overlap 1960646 1960643 ACACGCTATATGAAA GGGGGAGGGA AAC TCCCTACCCC TAACGGCTATTTATA SSU05_2062 1960963 - 1960685 - | phosphotransferase system, galactitol-specific IIB component SSU05_2063 1962470 - 1961022 - | ascorbate-specific PTS system enzyme IIC TERM 2545 1962712 - 1962684 - R 100 -19.1 -4.4874 | opp_overlap 1962687, overlap 1962706 CCTAAAAATTTAAAA GAAGAGGTTGGTT TGA AACCAACCTCTTC TAGAGGGAAGTGATA TERM 2546 1962687 - 1962709 + r 100 -15 -3.28924 | opp_overlap 1962684 1962706 AAAAATTTAAAAGAA GAGGTTGGTT TGA AACCAACCTC TTCTAGAGGGAAGTG SSU05_2064 1966490 - 1962798 - | Type II secretory pathway, pullulanase PulA and related glycosidases TERM 2547 1963492 - 1963507 + gr 72 -7.6 -3.73224 | ACAGCATAGCGGTCC CCATTG CTTG CAATGG TTTGATAGGCAATGA TERM 2548 1965434 - 1965450 + gr 71 -4.3 -4.78572 | TATCATTGCCATATT TGAGGGT ATA GCCCGCA TTTTCTTGGTTGAAA SSU05_2065 1969176 - 1966330 - | Type II secretory pathway, pullulanase PulA and related glycosidases TERM 2549 1969306 - 1969285 - R 100 -8.8 -5.53991 | opp_overlap 1969284 1969287 CACTGACCAAAAAAA GAGACTAC TGAGGT GTAGTCTC CCTTTCAATTAAGGT SSU05_2066 1970230 - 1969289 - | transcriptional regulator TERM 2550 1970527 - 1970486 - R 100 -9.7 -5.63517 | opp_overlap 1970486 CCTCTAAACAAAAAA TACTCCAACTGCTAGAC CAATCAAT GTCTAACAATTGAAGTA TCTTTGTCAAATTCT SSU05_2067 1971342 - 1970596 - | putative amino acid ABC transporter, ATP-binding protein TERM 2551 1971300 - 1971319 + g 81 -9.3 -3.82499 | TCCCTTTTAACACCT GCTGACC ACCGAA GGTCAGC TTTACTCCATTTGCT SSU05_2068 1972011 - 1971352 - | ABC-type amino acid transport system, permease component TERM 2552 1971956 - 1971922 - G 95 -11.6 -3.78026 | overlap 1971920 1971953 GCCAAAGGTAAAAGA CAGGATTGTCAGTG GGATAGT CACCAACAATCCTG GAACAAGTATTTGTG SSU05_2069 1972827 - 1972024 - | amino acid ABC transporter periplasmic protein TERM 2553 1972961 - 1972949 - R 88 -4.8 -5.67063 | opp_overlap 1972949 CGGAGCATAAAAAAA GACC TACTC GGTC TTTATATCTCATATT SSU05_2070 1973586 - 1972975 - | surface antigen TERM 2554 1973406 - 1973423 + g 73 -5.5 -4.62471 | overlap 1973408 CCACAATTTTTTCTG CAGCAGC TTTG GCTGCTA TTTTTGCAGCTTCAA TERM 2555 1973408 - 1973421 + g 74 -8.1 -3.92577 | overlap 1973406 ACAATTTTTTCTGCA GCAGC TTTG GCTGC TATTTTTGCAGCTTC TERM 2556 1973551 - 1973562 + g 88 -3 -5.75599 | overlap 1973532 GGCTGTAAACAGTCC CAAT TTGA ATTG TTTTTTTATCATTTG TERM 2557 1973748 - 1973728 - R 100 -9.7 -5.40072 | opp_overlap 1973723 1973728 TTTTTGTCAAAAAAA CGACCTCCA ATA CGGAAGTCG TTTTCTATTTAGTGT TERM 2558 1973728 - 1973748 + r 80 -6.8 -4.83032 | opp_overlap 1973728, overlap 1973723 TTTTTGTCAAAAAAA CGACCTCC AATAC GGAAGTCG TTTTCTATTTAGTGT SSU05_2071 1975294 - 1973918 - | phosphotransferase system cellobiose-specific component IIC SSU05_2072 1975778 - 1975338 - | hypothetical protein SSU05_2073 1975916 - 1975797 - | phosphotransferase system cellobiose-specific component IIA SSU05_2074 1976112 - 1975840 - | phosphotransferase system cellobiose-specific component IIA SSU05_2075 1976425 - 1976114 - | phosphotransferase system cellobiose-specific component IIB SSU05_2076 1978432 - 1976438 - | transcriptional antiterminator SSU05_2077 1979633 - 1978524 - | hypothetical protein SSU05_2078 1981040 - 1979640 - | Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase SSU05_2079 1982227 - 1981037 - | alpha-galactosidase/6-phospho-beta-glucosidase SSU05_2080 1982397 - 1982245 - | alpha-galactosidase/6-phospho-beta-glucosidase TERM 2559 1982561 - 1982525 - R 95 -10.3 -4.40804 | opp_overlap 1982528 1982533, overlap 1982533 GATCATTCTAGAAAA TACAAAAACGACCTCCA ATA CGGAAGTCGTTTTCTTA TTATTTACATTTATT TERM 2560 1982528 - 1982558 + r 73 -6.9 -4.13254 | opp_overlap 1982525 1982533, overlap 1982533 CATTCTAGAAAATAC AAAAACGACCTCC AATAC GGAAGTCGTTTTC TTATTATTTACATTT TERM 2561 1982553 - 1982533 - R 100 -9.7 -5.32599 | opp_overlap 1982528 1982533, overlap 1982525 TAGAAAATACAAAAA CGACCTCCA ATA CGGAAGTCG TTTTCTTATTATTTA TERM 2562 1982533 - 1982553 + r 82 -6.8 -5.04082 | opp_overlap 1982533 1982525, overlap 1982528 TAGAAAATACAAAAA CGACCTCC AATAC GGAAGTCG TTTTCTTATTATTTA leuS 1985091 - 1982572 - | leucyl-tRNA synthetase TERM 2563 1985164 - 1985145 - R 100 -8.6 -5.19879 | opp_overlap 1985145 TGGGAAAGACAAAAA CAGCCAGT TTTC ACTAGCTG TTTTCCCATTTTTAC TERM 2564 1985145 - 1985164 + r 73 -6.4 -4.31329 | opp_overlap 1985145 TGGGAAAGACAAAAA CAGCCAGT TTTC ACTAGCTG TTTTCCCATTTTTAC SSU05_2082 1987068 - 1985176 - | metalloendopeptidase TERM 2565 1986064 - 1986075 + g 71 -3 -4.9218 | CACATCGGCCTTGGC TTCT GGTG AGAA TTTTTCTCCTGCATA SSU05_2083 1987999 - 1987124 - | zinc ABC transporter, permease protein TERM 2566 1987872 - 1987852 - GR 74 -6.2 -4.43309 | gap 1 CAATCCCAAGCAAAA CAGAATGCG ATAG CGCAT-CTG CCAGCATTGATTGAT SSU05_2084 1988834 - 1987956 - | Mn2+/Zn2+ ABC transporter permease SSU05_2085 1989579 - 1988809 - | ATP-binding ABC transport protein TERM 2567 1989398 - 1989408 + gr 78 -6.8 -4.56597 | opp_overlap 1989393, overlap 1989394 AGCAAGCGAACCTGC CCTG TGT CAGG TTTTTCCAACCCCAA SSU05_2086 1991086 - 1990133 - | high-affinity zinc uptake system protein znuA precursor SSU05_2087 1991182 - 1991841 + | putative metal-dependent transcriptional regulator TERM 2568 1991858 - 1991825 - T 86 -6.7 -5.09895 | opp_overlap 1991829, overlap 1991829 TATTCATCGAAAAAA GCAATCGCCCAGCCT AAAC AAGCTGAGCGATTTT TTCTTCTAAAATAAA TERM 2569 1991829 - 1991854 + T 100 -7.5 -5.55769 | opp_overlap 1991825 1991829 CATCGAAAAAAGCAA TCGCCCAGCCT AAAC AAGCTGAGCGA TTTTTTCTTCTAAAA TERM 2570 1991854 - 1991829 - T 93 -11.9 -3.94773 | opp_overlap 1991829, overlap 1991825 CATCGAAAAAAGCAA TCGCCCAGCCT AAAC AAGCTGAGCGA TTTTTTCTTCTAAAA SSU05_2088 1992164 - 1991838 - | hypothetical protein SSU05_2089 1992948 - 1992250 - | hypothetical protein SSU05_2090 1993808 - 1993290 - | RevS TERM 2571 1993945 - 1993923 - R 95 -11.4 -4.47397 | ATAAACATAGGAAAA GGTAGTTGCT GGA AACAACTACC CCTTGCAGAACCGTT SSU05_2091 1994177 - 1993986 - | hypothetical protein TERM 2572 1994276 - 1994293 + r 73 -9.1 -3.40611 | opp_overlap 1994276, overlap 1994274 TTACACATCAAAAAA CCAGCCT ACTT GGGCTGG TCTTCTTGGAGTCGC TERM 2573 1994293 - 1994276 - R 100 -8.4 -5.24989 | opp_overlap 1994276 1994274 TTACACATCAAAAAA CCAGCC TACTTG GGCTGG TCTTCTTGGAGTCGC SSU05_2092 1994478 - 1994281 - | hypothetical protein SSU05_2093 1994985 - 1994542 - | D-tyrosyl-tRNA deacylase TERM 2574 1994710 - 1994724 + g 89 -3.5 -5.71712 | opp_overlap 1994710 TGCCGCTCCTGTAAA GGCAG GGCGA TTGCC TTTTTTTGTATCCGC SSU05_2094 1997188 - 1994987 - | GTP pyrophosphokinase TERM 2575 1995322 - 1995308 - G 72 -10 -2.88544 | CTTGAGGTTCATACA GTCCAC ACG GTGGAC CGCTACCCCACGCCC TERM 2576 1998725 - 1998709 - g 73 -5.1 -4.59984 | opp_overlap 1998724, overlap 1998702 1998710 1998723 AAAATCGATACAAAA TCATCTG TAG CAGATGG TCGCATCATCGACCT SSU05_2095 1997446 - 1999887 + | 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase bifunctional periplasmic precursor protein TERM 2577 2000122 - 2000171 + T 79 -3.2 -5.50723 | gap 3, opp_overlap 2000122, overlap 2000155 CACTCAATAAAAAAA CACAGATAGACTCAAGCT-GATTTT GAT GAAATCCAGCTA-AG-CTGTCTGTG TTTTTCTTTTGCTCC TERM 2578 2000171 - 2000122 - T 90 -3.8 -5.8187 | gap 2, opp_overlap 2000122 2000155 CACTCAATAAAAAAA CACAGATAGACTCAAGCTGATTTT GATG AAATCCAGC-TAAG-CTGTCTGTG TTTTTCTTTTGCTCC SSU05_2096 2001233 - 2000409 - | sortase-like protein SSU05_2097 2002087 - 2001230 - | sortase-like protein SSU05_2098 2002952 - 2002065 - | sortase-like protein TERM 2579 2002150 - 2002136 - G 74 -5 -4.89477 | TTGTTAATAAGAAAA TCAGTA AAA TACCGA CAAACATTCCGAGCG TERM 2580 2003196 - 2003164 - R 74 -3.6 -5.0925 | gap 2, opp_overlap 2003158 2003193, overlap 2003158 2003157 2003192 2003193 CTTTAAAACGAAAAA TCCCATTGCCCCAGAT TCA ACCT-GA-CAATGGGA TTTTCCCTCTATTCT TERM 2581 2003257 - 2003223 - R 84 -10.9 -3.54424 | overlap 2003224 TTCTAGTCTGTCAAA CGTTATCGCTTAGTA TAAGT TACCAAGCGATAACC TAGCAAGAAGAGCAA TERM 2582 2003256 - 2003224 - R 95 -14.4 -2.72511 | overlap 2003223 TCTAGTCTGTCAAAC GTTATCGCTTAGTA TAAGT TACCAAGCGATAAC CTAGCAAGAAGAGCA SSU05_2099 2004079 - 2003225 - | hypothetical protein SSU05_2100 2005236 - 2004103 - | hypothetical protein TERM 2583 2005132 - 2005167 + gr 81 -4 -5.25772 | opp_overlap 2005127 2005141, overlap 2005141 ATTTAAAGTAGCCTT GTAAGTCAAGGTAAAG TTCA CTTCACCTTCTCTTGC TTTTTCTTCTAATTT SSU05_2101 2006056 - 2005196 - | hypothetical protein TERM 2584 2005358 - 2005369 + grH 78 -5.8 -4.81814 | TGTCTTATATGCTGC GTCC TTAG GGAC TTTTGTTGTAATAGT SSU05_2103 2010194 - 2006100 - | cell wall anchor domain-containing protein SSU05_2102 2010170 - 2010262 + | hypothetical protein SSU05_2104 2013234 - 2010235 - | hypothetical protein TERM 2585 2012104 - 2012116 + g 77 -6.3 -4.58283 | opp_overlap 2012104 2012103 TGAGTTCAGCATAAG TCCTT CTA AAGGA TTTTTAGGGGAGTTG TERM 2586 2012378 - 2012394 + g 70 -3.7 -4.85545 | TCCTCAATGCCCTCT TCTTGTT CAG AACTAGA TTTTGTTAATTTGAT TERM 2587 2013606 - 2013580 - R 70 -2.5 -5.09762 | gap 1, overlap 2013584 ACCTTAATATAAAAA TGAC-CATATTT CAAA AAATATGCATCA CACCATATTACATTT TERM 2588 2013651 - 2013662 + r 77 -3 -5.44119 | CTAATGAGTCTAGGA CAAA AAGA TTTG TTTTTTTGAAATACC TERM 2589 2013718 - 2013761 + r 78 -5.4 -4.9725 | opp_overlap 2013718 AAACAAAACAAAAAA CGAACAATACTAGTTTCTAG ATAC CTTAAAACTAATTTTGTTCG TTTTTATATACAAAT TERM 2590 2013761 - 2013718 - R 100 -9.8 -5.95449 | opp_overlap 2013718 AAACAAAACAAAAAA CGAACAATACTAGTTTCTAG ATAC CTTAAAACTAATTTTGTTCG TTTTTATATACAAAT TERM 2591 2014387 - 2014445 + r 74 -7.7 -3.83675 | opp_overlap 2014394, overlap 2014394 TCTACCCTAATCAGC -TATGTAAGGATGAGAAGACGGACTCTAC TAG GAATAGTC-GTCTTCTCATCCTTGCCTGG TTCTTAATTCCATTA TERM 2592 2014394 - 2014437 + r 100 -14.8 -3.16421 | gap 1, opp_overlap 2014394, overlap 2014387 TAATCAGCTATGTAA GGATGAGAAGACGGACTCTAC TAG GAATAGTC-GTCTTCTCATCC TTGCCTGGTTCTTAA TERM 2593 2014437 - 2014394 - R 100 -14.8 -3.0894 | gap 1, opp_overlap 2014394 2014387 TAATCAGCTATGTAA GGATGAGAAGACGGACTCTAC TAG GAATAGTC-GTCTTCTCATCC TTGCCTGGTTCTTAA SSU05_2105 2014652 - 2014530 - | hypothetical protein TERM 2594 2014611 - 2014594 - G 71 -9.9 -2.59569 | opp_overlap 2014607, overlap 2014593 2014587 TGGCCAAACCAAGAT CCTAGCA AACC TGCTAGG GCAATGGCCAAGGTA SSU05_2106 2015414 - 2014656 - | hypothetical protein SSU05_2107 2015670 - 2015404 - | ribosomal protein L11 methylase SSU05_2108 2016271 - 2015654 - | hypothetical protein SSU05_2109 2016443 - 2016285 - | ribosomal protein L11 methylase TERM 2595 2016349 - 2016360 + g 71 -4.4 -4.86613 | ATCGTTAATTCTTGC CATG AGTT CATG TTTGTTTTCCTTTTC TERM 2596 2016754 - 2016718 - R 86 -5.4 -5.37043 | gap 2, opp_overlap 2016718 2016721 ATTCGAGATAAAAAA TAACCGTCAGCAAACTTT GAC ACAG-TT-CTGACGGTTA TTTAATCTAACGAAC TERM 2597 2016796 - 2016819 + r 100 -12.5 -5.02287 | TTAGCGGTCCTACTG GGCGTTGAG CTGGAA CTCAACGCC TTTTCTATTTTTATA SSU05_2110 2017234 - 2016881 - | hypothetical protein SSU05_2111 2017706 - 2017236 - | hypothetical protein SSU05_2112 2018043 - 2017708 - | hypothetical protein SSU05_2113 2018113 - 2019399 + | recombination factor protein RarA TERM 2598 2019786 - 2019820 + T 91 -5.9 -5.47821 | gap 1, opp_overlap 2019794, overlap 2019787 2019794 GAGGATTGGTTGATA TGAGGA-AAGTCTTGA TTTA TCAAGGCTTTTTCTCG TTTTTTTGAGTGAAT TERM 2599 2019787 - 2019819 + T 71 -7.2 -3.87608 | gap 1, opp_overlap 2019794, overlap 2019786 2019794 AGGATTGGTTGATAT GAGGA-AAGTCTTGA TTTA TCAAGGCTTTTTCTC GTTTTTTTGAGTGAA TERM 2600 2019794 - 2019811 + T 83 -6.3 -5.14894 | opp_overlap 2019794, overlap 2019787 2019786 GTTGATATGAGGAAA GTCTTGA TTTA TCAAGGC TTTTTCTCGTTTTTT SSU05_2114 2020438 - 2019881 - | organic radical activating protein SSU05_2115 2021152 - 2020625 - | acetyltransferase SSU05_2116 2022467 - 2021121 - | 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases TERM 2601 2022460 - 2022471 + gr 88 -3 -5.80727 | overlap 2022436 ATACTAATATCTGTA TAGT CCAT ACTA TTTTTTCTTGTTTTT SSU05_2117 2022612 - 2022469 - | hypothetical protein TERM 2602 2022567 - 2022577 + g 71 -8.2 -3.49858 | GATAGCGTGTCACCA GGGC CTT GCCC TTATCGTCTAATTGA TERM 2603 2022679 - 2022652 - R 90 -10.7 -4.33417 | opp_overlap 2022649 2022652 TTCATTTATAACAAA CTTCCACAGCT ACCTGG AACTGTGGAAG TCCTATCTTGTTTAT SSU05_2118 2024888 - 2022702 - | anaerobic ribonucleoside triphosphate reductase TERM 2604 2022973 - 2022987 + g 81 -7.2 -4.65916 | opp_overlap 2022970, overlap 2022970 TAGTCCCAAACAGCT TCCAAA GCC TTTGGA TTTTGTTGCAGTACA TERM 2605 2023323 - 2023349 + g 72 -9.4 -3.14211 | TGGGTTGGTCTCCCA TTCGCCACCGTA AAA TACGGTTGCGAC TTCATACAAACCAAT TERM 2606 2023525 - 2023511 - G 78 -10 -3.55444 | opp_overlap 2023523 GCTCCACGCGGTAAA CCAAGG CAT CCTTGG CAATGGCCATACGTT TERM 2607 2025133 - 2025115 - H 100 -10.3 -5.28315 | opp_overlap 2025113 AGAAAACCTAAAAAA CAGCCCT CTAAC AGGGCTG GCTCTATGTATTGAA TERM 2608 2025190 - 2025218 + H 100 -13.3 -5.39721 | opp_overlap 2025190 2025194 ATGTCATTAAGTTAA CTAACCTATCACG TTT TGTGGTAGGTTAG TTTTTTCTATGGTAC TERM 2609 2025218 - 2025190 - H 79 -10.4 -3.20901 | opp_overlap 2025190, overlap 2025194 ATGTCATTAAGTTAA CTAACCTATCAC GTTTT GTGGTAGGTTAG TTTTTTCTATGGTAC SSU05_2119 2025258 - 2025608 + | hypothetical protein TERM 2610 2026208 - 2026177 - g 75 -5.3 -4.82678 | gap 1, opp_overlap 2026175 2026178, overlap 2026179 CCAGAAAAATTAAAA GATCTCTATGCC TACAGATGG GGCATAGAGA-C TAGTTTTCCTGACCT TERM 2611 2026207 - 2026179 - g 80 -9 -4.00742 | opp_overlap 2026178 2026175, overlap 2026177 AGAAAAATTAAAAGA TCTCTATGCC TACAGATGG GGCATAGAGA CTAGTTTTCCTGACC SSU05_2120 2025757 - 2026548 + | transposase TERM 2612 2026603 - 2026641 + T 82 -7.5 -4.47786 | opp_overlap 2026595 2026603 CCCTAAATACAAAAA CTATTCCCGTTTTGTCA TCAAT TGCTCAGACGGGAATAG TTTCTTTAGCTGCTT TERM 2613 2026641 - 2026603 - T 73 -3.1 -5.19879 | opp_overlap 2026603, overlap 2026595 CCCTAAATACAAAAA CTATTCCCGTTTTGTCA TCAAT TGCTCAGACGGGAATAG TTTCTTTAGCTGCTT SSU05_2121 2027325 - 2026885 - | hypothetical protein SSU05_2122 2027765 - 2027322 - | response regulator TERM 2614 2027886 - 2027867 - R 86 -6.4 -5.12707 | CTAAACGGCAAAAAA GCCAGAAC AACT GTCCTGAC TTTCATTGTCTTATA SSU05_2123 2030077 - 2027897 - | mismatch repair ATPase SSU05_2124 2030441 - 2030061 - | mismatch repair ATPase TERM 2615 2030403 - 2030371 - G 87 -5 -5.46698 | CGGAAAAGCAAAAAA GCATCTGGATAC TGTGCTTTT ATATCCAGATAC TGCTGCATTCCCGGA SSU05_2125 2030896 - 2030453 - | arginine repressor argS 2031000 - 2032688 + | arginyl-tRNA synthetase TERM 2616 2032694 - 2032715 + F 100 -8 -5.60993 | gap 1, opp_overlap 2032694, overlap 2032696 AAAAATGTAATCAAA GCCTTCGGC CATCA GCCGA-GGC TTTTTTTCTACCACA TERM 2617 2032715 - 2032694 - f 81 -8.7 -4.00683 | gap 1, opp_overlap 2032694 2032696 AAAAATGTAATCAAA GCCTTCGGCC ATC AGCCGA-GGC TTTTTTTCTACCACA TERM 2618 2032696 - 2032714 + F 77 -8.1 -3.95873 | opp_overlap 2032694, overlap 2032694 AAATGTAATCAAAGC CTTCGGC CATCA GCCGAGG CTTTTTTTCTACCAC TERM 2619 2032901 - 2032919 + G 75 -3 -5.20333 | AGAAAAGGAATCGCC TGTCAGCT TCT AGCCGCCA TTTTTATTGTCGGTA TERM 2620 2033195 - 2033213 + G 86 -10.3 -3.89822 | opp_overlap 2033194 2033193 GCCTGGTGGGAAACT CCCATGC ATGTC GCATGGG TTTCTGCAGTAAATG SSU05_2127 2032820 - 2033782 + | surface antigen TERM 2621 2033806 - 2033826 + T 95 -8.3 -4.89009 | opp_overlap 2033806 AATACAATATTTAAA GCACAATCT TTT AGACTGTGC TTTTTCATTAAATAT TERM 2622 2033826 - 2033806 - T 86 -10.5 -3.80745 | opp_overlap 2033806 AATACAATATTTAAA GCACAATCT TTT AGACTGTGC TTTTTCATTAAATAT SSU05_2128 2033956 - 2033834 - | major facilitator superfamily permease SSU05_2129 2034386 - 2033934 - | major facilitator superfamily permease SSU05_2130 2034465 - 2034647 + | hypothetical protein TERM 2623 2034651 - 2034684 + T 75 -5.4 -4.81863 | gap 1, opp_overlap 2034652 2034654, overlap 2034654 CAACAGAGATAACAA AGA-CTCCTCTAAGT TAGCT GCTTAGAGGAGTTCA TTTTATTATGACTTT TERM 2624 2034682 - 2034652 - T 86 -8.4 -4.45484 | opp_overlap 2034651 2034654, overlap 2034654 AACAGAGATAACAAA GACTCCTCTAAG TTAGCTG CTTAGAGGAGTT CATTTTATTATGACT TERM 2625 2034680 - 2034654 - T 88 -11 -3.8147 | opp_overlap 2034651 2034654, overlap 2034652 CAGAGATAACAAAGA CTCCTCTAAG TTAGCTG CTTAGAGGAG TTCATTTTATTATGA TERM 2626 2034654 - 2034680 + T 91 -11.7 -3.85542 | opp_overlap 2034654 2034652, overlap 2034651 CAGAGATAACAAAGA CTCCTCTAAGT TAGCT GCTTAGAGGAG TTCATTTTATTATGA SSU05_2131 2035481 - 2034690 - | 4-alpha-glucanotransferase SSU05_2132 2036208 - 2035411 - | 4-alpha-glucanotransferase TERM 2627 2035529 - 2035514 - GH 70 -5.4 -4.41348 | overlap 2035510 TCCGTTTTAAAGAAA TGTGGA TTAG CCCACA TATCGGCAGAATCAG TERM 2628 2036227 - 2036245 + H 76 -4.5 -5.08086 | TTCTCCTATCTAATC CGCTTGC ACAAC GCAAACG TTTTCTCTTTTTTAT TERM 2629 2037042 - 2037023 - g 74 -9.4 -3.36341 | overlap 2037013 2037012 2037010 2037021 AACACTTGCTAAAGA CAGCAAAT ACGC ATTTGCTG GTGAAGAGGGTAAAA SSU05_2133 2036511 - 2037770 + | ABC transporter substrate-binding protein - maltose/maltodextrin TERM 2630 2037778 - 2037815 + F 76 -9.4 -3.34895 | gap 1, opp_overlap 2037770 2037782, overlap 2037783 2037784 2037786 GCAACTAGTCAAGTT TAAAGTTGGACTGGGAG TTCTC TTCCCAGTCT-ACTTTA TTACTTAACGATAAA TERM 2631 2037784 - 2037810 + F 75 -9.5 -3.19048 | opp_overlap 2037782 2037770, overlap 2037783 2037778 2037786 AGTCAAGTTTAAAGT TGGACTGGGAG TTCTC TTCCCAGTCTA CTTTATTACTTAACG TERM 2632 2037786 - 2037808 + F 77 -9.9 -3.15129 | opp_overlap 2037782 2037770, overlap 2037784 2037783 2037778 TCAAGTTTAAAGTTG GACTGGGAG TTCTC TTCCCAGTC TACTTTATTACTTAA TERM 2633 2037964 - 2037933 - f 80 -2.4 -5.62288 | gap 1, overlap 2037939 GTAATAAAAGAAAAA CTAAAT-GACGATAA CAT CCACCGTCTATTCAG AAGCTATATAAGGAG SSU05_2134 2037983 - 2039278 + | ABC-type sugar transport system, permease component SSU05_2135 2039253 - 2040122 + | ABC-type maltose transport system, permease component TERM 2634 2040105 - 2040134 + F 91 -9.4 -4.4874 | gap 2, opp_overlap 2040104 2040103 TCTGGTTTAACAAGC GGTGGCGACAAGGG ATAA CCCT-GTC-CCACC TTTTCCCTTTTTAGG SSU05_2136 2040182 - 2040964 + | integral membrane protein TERM 2635 2040958 - 2040947 - f 70 -3 -5.07652 | TTTTTCAAAACAAAA TTCA GAGA TGAA ATCTAGGAGGTCTAT SSU05_2137 2040974 - 2041957 + | transcriptional regulator TERM 2636 2042825 - 2042803 - g 77 -6.3 -4.72007 | gap 1, overlap 2042804 GTGGATGAAAATAAA CCCCAAGCTG TTTA CAACT-GGGG CTACGACCCTATGCA SSU05_2138 2041981 - 2044032 + | Type II secretory pathway, pullulanase PulA and related glycosidases TERM 2637 2044112 - 2044132 + T 100 -7.6 -6.02914 | opp_overlap 2044112 ATAATCTCCTTAAAA CTCACTAG TCACT CTGGTGAG TTTTTTTTGTGTGAC TERM 2638 2044178 - 2044156 - T 100 -9.9 -5.52384 | opp_overlap 2044173 GTGTGACCAAAAAAA CAACCCAGC ATAAA GCTGAGTTG AGGCTCTTTACATCA SSU05_2139 2044638 - 2044186 - | ribonucleotide reduction protein TERM 2639 2044706 - 2044662 - R 100 -8.9 -5.18726 | gap 1, opp_overlap 2044662 TCTTTATAATAAAAA CACTACATGTAGACTGTAAA TACTAT TTTACT-CCTACATGTAGTG TTTGTCAATCAGTCG SSU05_2140 2045653 - 2044715 - | hypothetical protein TERM 2640 2045006 - 2044990 - G 74 -6.6 -4.25104 | TTTGTTTCACGAAAA TCGCAT CTGTC ATGCGA CTGGAGATAAACAGC TERM 2641 2045534 - 2045512 - G 73 -9.9 -3.00923 | opp_overlap 2045508 CTGCAATACTAGATA GGAGTCCAT AAATA ATGGACCCC GATATCCGTTCAGCA aspS 2047391 - 2045640 - | aspartyl-tRNA synthetase TERM 2642 2046659 - 2046676 + g 71 -8.5 -3.57263 | TGTCTTGGATTTCAA CCTCATT CAAG AATGAGG TTTCCAAGTCAACCT TERM 2643 2046876 - 2046892 + g 76 -9.5 -3.45839 | overlap 2046866 2046870 GCGCGCACCTTCTGG TGTTGAC TTG GTCAACA TTGGTGTTTCCACAT TERM 2644 2047497 - 2047480 - R 76 -4.8 -4.93595 | opp_overlap 2047480 AGAAAAATCGAAAAA CCAGCC CTAGTT GACTGG TTTACTATATAACAT SSU05_2142 2047938 - 2047486 - | acyltransferase SSU05_2143 2048860 - 2047913 - | oxidoreductase TERM 2645 2048927 - 2048912 - R 81 -5.4 -5.16133 | opp_overlap 2048912 ATTATAACAGAAAAA CTCAGC CGAA ACTGAG TTTTAATTAAAACCA SSU05_2144 2049964 - 2048930 - | cell wall biosynthesis glycosyltransferase SSU05_2145 2052390 - 2049988 - | glucocerebrosidase TERM 2646 2052520 - 2052497 - R 100 -8.9 -5.24531 | opp_overlap 2052516, overlap 2052515 ATCTGCTATAAAAAA TCTCCCCAG AAAATA CTAGGGAGA TCGCTCCTATTACTT TERM 2647 2052611 - 2052623 + r 76 -7.7 -4.12532 | opp_overlap 2052611, overlap 2052606 AGGTGGGAGATAGGA CGAAC CTA GTTCG TTTCTATATGAGCAG SSU05_2146 2053249 - 2052749 - | hypothetical protein TERM 2648 2053133 - 2053119 - G 72 -7.2 -4.00532 | GCTGTAAAGAGGAAA TTGGTT GAC AACCAA AGGACGCAGAAGTTT TERM 2649 2053237 - 2053275 + g 81 -7.5 -4.74161 | gap 1, opp_overlap 2053247 2053250, overlap 2053241 2053247 2053250 CTTTCATACGGTCTC CTATGCAAGACAAGGGGG AAAT CCCCCTTGTTATGC-TAC TTCTTTTTCTTCTTT TERM 2650 2053241 - 2053272 + g 100 -15.2 -3.23415 | opp_overlap 2053247 2053250, overlap 2053237 2053247 2053250 CATACGGTCTCCTAT GCAAGACAAGGGGG AAAT CCCCCTTGTTATGC TACTTCTTTTTCTTC TERM 2651 2053247 - 2053266 + g 100 -13.6 -3.50358 | opp_overlap 2053247 2053250, overlap 2053241 2053237 2053250 GTCTCCTATGCAAGA CAAGGGGG AAAT CCCCCTTG TTATGCTACTTCTTT TERM 2652 2053266 - 2053247 - G 100 -13.6 -3.08679 | opp_overlap 2053247 2053241 2053237 2053250, overlap 2053250 GTCTCCTATGCAAGA CAAGGGGG AAAT CCCCCTTG TTATGCTACTTCTTT TERM 2653 2053250 - 2053263 + r 83 -9.5 -3.86935 | opp_overlap 2053247 2053250, overlap 2053247 2053241 2053237 TCCTATGCAAGACAA GGGGG AAAT CCCCC TTGTTATGCTACTTC TERM 2654 2053263 - 2053250 - R 81 -9.5 -3.68988 | opp_overlap 2053250 2053247 2053241 2053237, overlap 2053247 TCCTATGCAAGACAA GGGGG AAAT CCCCC TTGTTATGCTACTTC SSU05_2147 2056176 - 2053267 - | beta-glucosidase TERM 2655 2055036 - 2055047 + g 85 -5.8 -5.1675 | overlap 2055039 TTTGTGGTTCTTTTG CTCC CCAT GGAG TTTTTTCATAGGTGA TERM 2656 2055534 - 2055552 + g 73 -6 -4.52873 | overlap 2055532 2055551 AATCTCCACCATTGA GGGAGAAA ATA TTTGTCCC TTCTTTTTCTGGAAG TERM 2657 2056199 - 2056214 + H 84 -4.7 -5.42605 | CCTCGTAAACATTTC GGCTT TCATGT AAGCC TTTTCTTTTTCTTGA SSU05_2148 2056415 - 2057128 + | response regulator TERM 2658 2057607 - 2057619 + G 75 -9.1 -3.65828 | TGAGCAGCGAGATGT GACGG TAG CCGTC TTTACAACTTTATCT SSU05_2149 2057125 - 2058432 + | two-component sensor histidine kinase TERM 2659 2058433 - 2058460 + T 86 -9.2 -4.25347 | opp_overlap 2058438, overlap 2058438 CCTTTACAAGTATAG AAAAATCCCGCT TGAA GGCGGGATTTTC TTTCTATTCATCATT TERM 2660 2058455 - 2058438 - T 95 -8.4 -5.05079 | opp_overlap 2058433 2058438 ACAAGTATAGAAAAA TCCCGC TTGAAG GCGGGA TTTTCTTTCTATTCA TERM 2661 2058438 - 2058455 + T 100 -9.1 -5.10033 | opp_overlap 2058438, overlap 2058433 ACAAGTATAGAAAAA TCCCGCT TGAA GGCGGGA TTTTCTTTCTATTCA SSU05_2150 2058920 - 2058471 - | phosphohydrolase SSU05_2151 2059095 - 2058931 - | phosphohydrolase SSU05_2152 2059813 - 2059034 - | phosphohydrolase TERM 2662 2059185 - 2059195 + gr 73 -6.8 -4.18494 | opp_overlap 2059175 ATACATCCATTGGTT GGAG GAG CTCC TTTTCCGTAGCCGTC TERM 2663 2059345 - 2059327 - GR 75 -8.8 -3.5511 | overlap 2059325 CGTGATTGACAAATA GCTCTGCA AAT TGCTGAGC AGTGACCTGATCCGT TERM 2664 2059885 - 2059857 - R 83 -6 -5.20333 | opp_overlap 2059857 GAGGGACAAGAAAAA GAAGCTCGAC CTTCTTTCT GCCGAGCCTC TTATGTCTACAATTT SSU05_2153 2060492 - 2059899 - | succinate dehydrogenase/fumarate reductase, flavoprotein subunit SSU05_2154 2061427 - 2060489 - | succinate dehydrogenase/fumarate reductase, flavoprotein subunit TERM 2665 2061534 - 2061513 - R 88 -3.1 -5.85737 | opp_overlap 2061513 ACATGAACAAAAAAA TGTATGA TATCCGCT TCATACA TTCTTAAAACTATTT SSU05_2155 2061997 - 2061548 - | Thiol-disulfide isomerase and thioredoxin TERM 2666 2062040 - 2062024 - R 79 -5.1 -5.1104 | opp_overlap 2062024 AAATACAGACAAAAA GCCCT TGTAAAT AGGGC TTTTAAAATATCGAT rpsD 2062674 - 2062063 - | 30S ribosomal protein S4 TERM 2667 2062970 - 2062957 - R 95 -4.5 -6.00086 | opp_overlap 2062957 ATAGCACAAAAAAAA GGCTC TGTA AAGCC TTATATAGCGATTAA SSU05_2157 2063233 - 2062982 - | hypothetical protein SSU05_2158 2064151 - 2063237 - | replicative DNA helicase SSU05_2159 2064593 - 2064105 - | replicative DNA helicase rplI 2065098 - 2064625 - | 50S ribosomal protein L9 SSU05_2161 2065837 - 2065088 - | signaling protein SSU05_2162 2067053 - 2065767 - | signaling protein TERM 2668 2066990 - 2066970 - GR 80 -4.7 -5.10029 | overlap 2066972 ACCAATTGGAAAAAA TCGGTGG ACAAGAG CCACCAA CCCAAATAAAATGAC SSU05_2163 2069073 - 2067157 - | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA TERM 2669 2067209 - 2067189 - G 75 -8.3 -3.87994 | ATTTATTTTTAGAAA TGGAACGAC TGC GTCCTTCCA AGTAGACCATGAGAA TERM 2670 2067550 - 2067582 + g 74 -4.2 -4.95957 | gap 2, opp_overlap 2067533, overlap 2067549 2067563 2067576 CTTGGCAGTCAGAGC GTC-T-GTCAAGGGCT TGA AGCCCATGGCTACGAC TTTTTCGTTGGTTTC SSU05_2164 2069477 - 2069070 - | NTP pyrophosphohydrolase including oxidative damage repair enzymes SSU05_2166 2069952 - 2069521 - | MutT/NudX family protein (putative) SSU05_2165 2069502 - 2069597 + | hypothetical protein SSU05_2167 2070493 - 2069969 - | hypothetical protein TERM 2671 2070097 - 2070076 - G 81 -9.5 -3.75517 | opp_overlap 2070076 2070075, overlap 2070072 AGTCCACAAAAGCAA TCCATTCAC ACTG GCGAATGGA ATTTCCTTCTTCCAG SSU05_2168 2070889 - 2070563 - | transcriptional regulatory protein SSU05_2169 2070982 - 2071404 + | ketosteroid isomerase-like protein TERM 2672 2071408 - 2071439 + T 100 -13.2 -4.89009 | opp_overlap 2071411, overlap 2071411 TTCTGGGGATAAGAT AAATAGCTTAGCAC GAGA GTGCTAAGCTATTA TTTTTGATTAAATAT TERM 2673 2071411 - 2071436 + T 100 -14.9 -4.53777 | opp_overlap 2071411, overlap 2071408 TGGGGATAAGATAAA TAGCTTAGCAC GAGA GTGCTAAGCTA TTATTTTTGATTAAA TERM 2674 2071436 - 2071411 - T 100 -14.9 -4.27117 | opp_overlap 2071411 2071408 TGGGGATAAGATAAA TAGCTTAGCAC GAGA GTGCTAAGCTA TTATTTTTGATTAAA trmU 2072571 - 2071447 - | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase TERM 2675 2071603 - 2071620 + g 71 -9.9 -2.72344 | overlap 2071605 GTCACCTTTTACCTT GACAGTC ACTT GACTGTC TGGTTGACGGTAGCG SSU05_2171 2072786 - 2073469 + | L-serine deaminase TERM 2676 2073622 - 2073606 - g 70 -9.5 -2.86828 | opp_overlap 2073605 2073606, overlap 2073596 2073594 AAATATTGACAATTA TGTCAAG AAA CTTGACA GTTATGAAAGCCTCC SSU05_2172 2073482 - 2074354 + | L-serine deaminase TERM 2677 2074368 - 2074394 + T 77 -8.1 -3.84808 | opp_overlap 2074368 2074374, overlap 2074374 GACAATAATGTAAAC CAAAAAGGACC CTAAC GGTCCTTTTTC TTATTATGGCTTCGG TERM 2678 2074388 - 2074374 - T 85 -7.1 -5.01042 | opp_overlap 2074374 2074368, overlap 2074368 AATGTAAACCAAAAA GGACC CTAAC GGTCC TTTTTCTTATTATGG TERM 2679 2074374 - 2074388 + T 95 -7.1 -5.34365 | opp_overlap 2074368 2074374, overlap 2074368 AATGTAAACCAAAAA GGACC CTAAC GGTCC TTTTTCTTATTATGG TERM 2680 2074549 - 2074533 - T 89 -10.9 -3.83102 | opp_overlap 2074533 TAAAGGAGGAGTAAA CTAGTCC AGT GGACTAG TTTAGCATGGTTAAA TERM 2681 2074533 - 2074549 + T 84 -10.9 -3.63895 | opp_overlap 2074533 TAAAGGAGGAGTAAA CTAGTCC AGT GGACTAG TTTAGCATGGTTAAA TERM 2682 2074801 - 2074771 - T 100 -14.2 -2.88249 | opp_overlap 2074771 2074768 2074774 2074776 2074777, overlap 2074777 TACATTCGTGAGACA GAAAAAGTCTAGCA TCG TGCTAGACCTCTTC TAATTTATCTTAGTA TERM 2683 2074771 - 2074801 + T 77 -9.8 -3.12253 | opp_overlap 2074771 2074777, overlap 2074768 2074774 2074776 2074777 TACATTCGTGAGACA GAAAAAGTCTAGCA TCG TGCTAGACCTCTTC TAATTTATCTTAGTA TERM 2684 2074776 - 2074796 + T 70 -8.3 -3.405 | opp_overlap 2074771 2074777, overlap 2074774 2074771 2074768 2074777 TCGTGAGACAGAAAA AGTCTAGCA TCG TGCTAGACC TCTTCTAATTTATCT TERM 2685 2074795 - 2074777 - T 100 -11.8 -5.03994 | opp_overlap 2074777 2074776 2074774 2074771 2074768, overlap 2074771 CGTGAGACAGAAAAA GTCTAGCA TCG TGCTAGAC CTCTTCTAATTTATC TERM 2686 2074777 - 2074795 + T 81 -11.8 -2.63215 | opp_overlap 2074771 2074777, overlap 2074776 2074774 2074771 2074768 CGTGAGACAGAAAAA GTCTAGCA TCG TGCTAGAC CTCTTCTAATTTATC SSU05_2173 2075389 - 2074811 - | LysM repeat-containing protein TERM 2687 2075312 - 2075302 - G 71 -6.8 -4.18494 | CACCCGCAGTTAAAA GGGA GAT TCCC GCTACCAAACCAGCA TERM 2688 2075488 - 2075475 - R 91 -6.7 -5.25699 | opp_overlap 2075475, overlap 2075469 ATTAGACAATAAAAA CGCTA TTTC TAGCG TTTTTTACTTATTTT TERM 2689 2075475 - 2075488 + r 93 -6.7 -5.43514 | opp_overlap 2075475 2075469 ATTAGACAATAAAAA CGCTA TTTC TAGCG TTTTTTACTTATTTT SSU05_2174 2076291 - 2075497 - | ABC-type cobalt transport system, permease component CbiQ and related transporters SSU05_2175 2077126 - 2076284 - | cobalt transporter ATP-binding subunit SSU05_2176 2077938 - 2077102 - | cobalt transporter ATP-binding subunit SSU05_2177 2078474 - 2077935 - | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase TERM 2690 2078429 - 2078417 - G 75 -3.4 -5.2015 | GTAACAAGATAAAAA TTGG AATTA CCAA AATCCTACCTATCGT SSU05_2178 2079341 - 2078484 - | hypothetical protein SSU05_2179 2080707 - 2079493 - | Zn-dependent peptidase SSU05_2180 2081957 - 2080704 - | Zn-dependent peptidase TERM 2691 2081547 - 2081521 - G 71 -3 -4.95155 | opp_overlap 2081513, overlap 2081524 TCTACATGATAAAAA TTATCTTCTATC TCT GACTGAAGAAAA TTGATTAAATTCGTT TERM 2692 2082192 - 2082182 - g 89 -6.8 -5.41143 | opp_overlap 2082181 GACGCGGTAAAAAAA TCCG TGT CGGA GATGTTATCACACTC SSU05_2181 2082031 - 2082414 + | hypothetical protein TERM 2693 2082468 - 2082497 + G 73 -5.8 -4.56597 | AATTACAACCAATTA GATATTGAGTTC CACAAA GGGCTCAATGTC TTTTTAGGCGAAAAC recF 2082417 - 2083511 + | recombination protein F TERM 2694 2083571 - 2083554 - T 79 -7 -4.47686 | opp_overlap 2083556, overlap 2083557 TTACAAAAAAGTAAA GACCCT GTCAAG AGGGTC TTGCAGAACGTAGAC TERM 2695 2083644 - 2083679 + T 95 -4.8 -6.09196 | TAGCAAGTTATTAAA CTCTTAGAAATATTGA TATT TCGGCGTTTCTGAGAG TTTTTTTATTTTCAA TERM 2696 2083748 - 2083709 - T 100 -13.2 -6.04953 | gap 1, opp_overlap 2083723 ATATAAAGAAAAAAA GATTGAAGAAAATTGTCCA AAA TGGACT-TTTTCTTCAATC TGAAAGACCCTGCCA TERM 2697 2083723 - 2083735 + T 93 -7.7 -5.12068 | opp_overlap 2083709 AGATTGAAGAAAATT GTCCA AAA TGGAC TTTTTCTTCAATCTG TERM 2698 2083754 - 2083771 + T 83 -7 -4.80077 | opp_overlap 2083754, overlap 2083762 TTCTTCAATCTGAAA GACCCT GCCAAG AGGGTC TTGTTTTTGTTTTAC TERM 2699 2083762 - 2083774 + T 91 -6.3 -5.50723 | opp_overlap 2083754, overlap 2083754 TCTGAAAGACCCTGC CAAGA GGG TCTTG TTTTTGTTTTACTGA SSU05_2183 2085264 - 2083783 - | inositol-5-monophosphate dehydrogenase TERM 2700 2085292 - 2085305 + r 70 -5.3 -4.50859 | TTCTTATTTAATATG TAGCA TGAT TGCTA TTTGTATTTTAATTA SSU05_2184 2086587 - 2085496 - | tryptophanyl-tRNA synthetase II TERM 2701 2086576 - 2086549 - G 100 -17 -4.84311 | TTTTACATAATAAAA GCCCACGCACAG AAAA CTGTGCGAGGGC GTCAAGGACACGGTG SSU05_2185 2086703 - 2086879 + | hypothetical protein SSU05_2186 2086876 - 2087757 + | hypothetical protein SSU05_2187 2087906 - 2089435 + | ABC transporter ATPase TERM 2702 2089440 - 2089468 + TF 80 -10.3 -3.33737 | opp_overlap 2089442, overlap 2089442 2089466 GGAAAGCATAATAAA AAGAGGCTGGG ACTTTTG CCCAGCCTCTC TTCTCAGAGTTCGTG TERM 2703 2089442 - 2089466 + TF 90 -12.9 -3.23447 | opp_overlap 2089442, overlap 2089440 AAAGCATAATAAAAA GAGGCTGGG ACTTTTG CCCAGCCTC TCTTCTCAGAGTTCG TERM 2704 2089466 - 2089442 - Tf 100 -12.9 -5.25772 | opp_overlap 2089442 2089440 AAAGCATAATAAAAA GAGGCTGGG ACTTTTG CCCAGCCTC TCTTCTCAGAGTTCG TERM 2705 2089559 - 2089573 + TF 74 -10 -2.6914 | overlap 2089558 GCCATTACGACTGTT GCGAAC AAA GTTCGC CTTATCTCCAACCTC TERM 2706 2089606 - 2089592 - Tf 78 -8.6 -3.66356 | opp_overlap 2089592 ATCTCCAACCTCAAA CTGTCT CCC AGACAG TTTGAGCTGTGCGGG TERM 2707 2089592 - 2089606 + TF 75 -8.6 -3.63627 | opp_overlap 2089592 ATCTCCAACCTCAAA CTGTCT CCC AGACAG TTTGAGCTGTGCGGG SSU05_2189 2089770 - 2089660 - | hypothetical protein TERM 2708 2090509 - 2090499 - gR 73 -5.4 -4.66163 | ACTTGGATTTAAAAA CTCA TGG TGAG ACATTTACAAAAATT TERM 2709 2091823 - 2091806 - gR 100 -4.1 -5.98781 | GAGAATCAAAAAAAA GTTGTCA TTAC TGTCAAC AATCAGTCAAGTGAG SSU05_2188 2089742 - 2092321 + | hypothetical protein TERM 2710 2092309 - 2092331 + Tr 88 -4.9 -5.55769 | opp_overlap 2092309 2092323 2092324 CTATTATTCTAAGAA CCGAGAA TACTAAACT TTCTCGG TTTTTTCTTGTAAAA TERM 2711 2092377 - 2092352 - TR 90 -9.1 -4.61482 | opp_overlap 2092333 2092349 2092351 2092356 2092357, overlap 2092324 2092323 2092357 TCTTGTAAAAAACAA GAAAACCTTGA TTTC TCAAGGGTTTC CTATGCTTTATCTAC TERM 2712 2092372 - 2092357 - TR 93 -7.6 -5.22104 | opp_overlap 2092349 2092357 2092356 2092351, overlap 2092352 TAAAAAACAAGAAAA CCTTGA TTTC TCAAGG GTTTCCTATGCTTTA TERM 2713 2092731 - 2092749 + Tr 100 -8.9 -5.46657 | TGCTGGAATCATTTA GACCTAC CTCGA GTAGGTC TTTTTTCTTGCCATA SSU05_2190 2093425 - 2092724 - | hypothetical protein SSU05_2191 2093935 - 2093432 - | SPOUT methyltransferase superfamily protein TERM 2714 2094005 - 2094019 + H 78 -8.6 -3.80855 | overlap 2094002 TAATTCACAGAGTTA TCCACA GGT TGTGGA TTGATTTTTGAAAAC SSU05_2192 2094085 - 2095281 + | trypsin-like serine protease TERM 2715 2095317 - 2095290 - f 100 -14.4 -4.02253 | opp_overlap 2095290 CGAATAATTGACAAA TGAGACTTTACA CAAT TGTAAAGTCTCA TTTTTTTTGCTAGAA TERM 2716 2095290 - 2095317 + F 100 -14.4 -5.86061 | opp_overlap 2095290 CGAATAATTGACAAA TGAGACTTTACA CAAT TGTAAAGTCTCA TTTTTTTTGCTAGAA SSU05_2193 2095342 - 2095908 + | transcriptional regulator SSU05_2194 2095892 - 2096107 + | transcriptional regulator