TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.275642 %AT, 7801611 nt, 40854 terms. Intergenic: 0.307166 %AT, H2T: 755176 nt, 4993 terms; T2T: 291164 nt, 3647 terms; H2H: 340527 nt, 5521 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|32141095|ref|NC_003888.3| Streptomyces coelicolor A3(2), complete genome (length 8667507) SCO0001 446 - 1123 + | hypothetical protein TERM 1 1858 - 1870 + G 85 -3.3 -4.87626 | GACGACTCCAGCACC TACGG CAC CCGGA TTTTTGATCTTGGGC TERM 2 3028 - 3007 - g 70 -13.7 -3.21099 | gap 1 TGGGTCCACCAGCAA CGCC-GCGCG CAC CGCGCAGGCG AACTCGACCCCCACC SCO0002 1252 - 3813 + | hypothetical protein SCO0003 3869 - 6220 + | DNA-binding protein SCO0004 6226 - 7173 + | hypothetical protein TERM 3 9068 - 9057 - g 71 -3.6 -4.48072 | overlap 9058 AGACCGAGCAGAAAA CCCG CCGT CGGA GAGCCACCCGCTCCG SCO0005 7187 - 9307 + | transposase SCO0006 9304 - 10410 + | ATP/GTP-binding protein SCO0007 11000 - 10554 - | hypothetical protein SCO0008 11360 - 11010 - | hypothetical protein SCO0009 11952 - 11617 - | hypothetical protein SCO0011 14023 - 13214 - | hypothetical protein SCO0010 12366 - 13457 + | hypothetical protein SCO0012 14454 - 14044 - | hypothetical protein SCO0013 15029 - 14739 - | hypothetical protein SCO0014 15595 - 15317 - | hypothetical protein TERM 4 15753 - 15797 + r 91 -20 -3.31144 | opp_overlap 15754 15784, overlap 15754 GTCTGCGGACGAAAA ACTGAGCGCGCTGGTCGGCG ACGAA CACCAACCAGCGCGCTCAGG TTCTGAGGCTCCGGC TERM 5 15796 - 15754 - R 100 -27.9 -4.72272 | opp_overlap 15753 15754, overlap 15784 TCTGCGGACGAAAAA CTGAGCGCGCTGGTCGGCG ACGAA CACCAACCAGCGCGCTCAG GTTCTGAGGCTCCGG TERM 6 15754 - 15796 + r 93 -23.5 -2.58544 | opp_overlap 15754 15784, overlap 15753 TCTGCGGACGAAAAA CTGAGCGCGCTGGTCGGCG ACGAA CACCAACCAGCGCGCTCAG GTTCTGAGGCTCCGG SCO0015 17302 - 16070 - | Na+/H+ antiporter TERM 7 17027 - 16972 - G 71 -15.3 -3.15574 | opp_overlap 17004, overlap 16970 16975 TGAAGGCCAGGAAGA CCAGGGCGGGCACGGCGA-CGCCGCCG AGCG CGGCGGCGATCGGCAGGGCCGCGC-GG CGTGGGTCGCGCAGC TERM 8 17025 - 16975 - G 70 -16.7 -2.77701 | gap 1, opp_overlap 17004, overlap 16972 16970 AGGCCAGGAAGACCA GGGCGGGCACGGCGA-CGCCGCCG AGCG CGGCGGCGATCGGCAGGGCCGCGC GGCGTGGGTCGCGCA TERM 9 17668 - 17646 - H 90 -12.6 -4.18018 | overlap 17623 17647 GCCCGCGAGCGAAAA CCGGGCCGCC GCA GGCTGCCCGA GCGCTGACGTCCGCC SCO0016 17715 - 17918 + | hypothetical protein SCO0017 17919 - 18263 + | hypothetical protein SCO0018 19351 - 18485 - | hypothetical protein SCO0019 19771 - 19517 - | hypothetical protein TERM 10 19853 - 19905 + H 70 -4.1 -4.45083 | overlap 19869 ACCGCCGCTGCCGGC GTTCGT-CGCGCATCATGCGGCC GCCGCGTCG GGCCGCTTGTCG-GCGTACGGAC TTTTCTGGCTCTGGC TERM 11 21398 - 21380 - g 86 -8.8 -4.62069 | GGGCGATCTCAAAAA GAGTGGAC TGG GACCACTC GTCGGCTTTGCCGGA TERM 12 21561 - 21513 - g 73 -11 -3.95219 | opp_overlap 21524 GTCAAACTGCAGAAA CGACTC-ATGGCCGGACGAGCCGG CGT CCGTCTCCTCCG-CCACCGCGTCG TCCTGATCGCCCACC SCO0020 19974 - 21620 + | transposase SCO0022 22761 - 22156 - | IS element ATP-binding protein SCO0021 21617 - 22210 + | hypothetical protein SCO0025 22843 - 23061 + | IS element ATP-binding protein SCO0026 23316 - 23831 + | secreted protein SCO0027 24345 - 23977 - | hypothetical protein SCO0028 24521 - 24378 - | hypothetical protein SCO0029 24644 - 24943 + | hypothetical protein SCO0030 25251 - 25871 + | hypothetical protein SCO0031 26385 - 25843 - | hypothetical protein SCO0032 26452 - 26393 - | hypothetical protein SCO0033 28773 - 26527 - | secreted neuraminidase TERM 13 26894 - 26923 + g 73 -9.9 -4.07568 | GTGAGCCGGTTTTCC GGGTCGGCGGCGT AGAC ATGCAGCTGGCCC TTTTGGACGAGGGCC SCO0034 29040 - 29519 + | hypothetical protein SCO0035 30054 - 29605 - | hypothetical protein SCO0036 30355 - 30116 - | hypothetical protein SCO0037 31131 - 30379 - | sigma factor SCO0038 31274 - 31146 - | sigma factor TERM 14 31781 - 31742 - g 76 -18.6 -2.52464 | gap 1 GGGGCGTTGAACGGA GCCATCGCGGCGGCGCG CCCCGAC CGCGCCGCCCCG-TGGC TGGAGCACGTGTGGA SCO0039 31520 - 32137 + | hypothetical protein SCO0040 32134 - 33357 + | glycosyl transferase SCO0041 33360 - 33845 + | integral membrane protein TERM 15 34013 - 33959 - g 82 -18.5 -3.05384 | gap 2, opp_overlap 33957 GCGCCGGTCACCGAA CTCCCGGAGGG-GGTCCCGTACG-CGC GGG GCGCCGACCCGGACCGCCCTCCGGGCG CCTATCTCGTCTATC SCO0042 33842 - 34777 + | hypothetical protein SCO0043 35907 - 35179 - | hypothetical protein SCO0044 36674 - 36006 - | oxidoreductase SCO0045 36817 - 36689 - | hypothetical protein SCO0046 36816 - 37478 + | hydrolase SCO0047 38768 - 37614 - | transcriptional regulator SCO0048 39490 - 39107 - | hypothetical protein TERM 16 39740 - 39754 + GH 76 -5.6 -4.36914 | GACCGAACTTCTGAC CGCGCT AAA AGAGCG TTTTGTCCCGACAGG SCO0049 39489 - 39812 + | hypothetical protein SCO0050 39877 - 40212 + | hypothetical protein SCO0055 43682 - 42171 - | membrane-associated oxidoreductase SCO0056 43768 - 43857 + | hypothetical protein SCO0057 43950 - 44090 + | hypothetical protein SCO0058 44253 - 44975 + | hypothetical protein SCO0059 45267 - 46073 + | zinc-binding oxidoreductase SCO0060 46064 - 46201 + | hypothetical protein SCO0061 47734 - 46430 - | hypothetical protein SCO0062 48892 - 47789 - | LacI family transcriptional regulator TERM 17 47874 - 47902 + g 70 -13.7 -3.24902 | ACGCGGGTGGGGACG GTGACGCGGCGGG AGG CCCGCGGCGCCGC TTCGTCGTCCTGTTC SCO0063 49824 - 48889 - | glucokinase SCO0064 51539 - 49821 - | hypothetical protein TERM 18 51634 - 51648 + H 74 -2.8 -4.72986 | ATGGAGCCTCGACCA CGCA CTTGACC TGCG TTTTTGATAACCCTC SCO0065 51831 - 53144 + | extracellular binding protein SCO0066 53141 - 54100 + | integral membrane permease SCO0067 54097 - 54918 + | integral membrane permease SCO0068 54968 - 56173 + | hydrolase (secreted protein) TERM 19 59059 - 59098 + G 78 -17.7 -3.15544 | CGTGCCGGTACGCGC CCGCGCCGACGCCGGTG CCGCGT CCCCGGCGCAGGCGCGG TTCCTGGCCCTGGAC SCO0069 56225 - 59383 + | hypothetical protein TERM 20 59455 - 59487 + TF 85 -19.1 -3.05384 | opp_overlap 59458, overlap 59457 CTGGGTGACGCGGAG GAACCGACGGCCACC GCG GGCGGCCGTCGGCTC TTCCCTCCGGGGGCG TERM 21 59457 - 59485 + TF 75 -15.9 -3.08679 | opp_overlap 59458, overlap 59455 GGGTGACGCGGAGGA ACCGACGGCCACC GCG GGCGGCCGTCGGC TCTTCCCTCCGGGGG TERM 22 59484 - 59458 - Tf 93 -21.6 -3.15544 | opp_overlap 59457 59455 GGTGACGCGGAGGAA CCGACGGCCACC GCG GGCGGCCGTCGG CTCTTCCCTCCGGGG SCO0071 60275 - 60069 - | hypothetical protein SCO0070 59558 - 60241 + | hypothetical protein TERM 23 60376 - 60415 + Tr 93 -21.6 -3.10344 | gap 1, opp_overlap 60381, overlap 60367 60381 CGCTGTGCAGTCCGA CGTAAGGCGCTCGGCCG TGCTCTT CGGCCGAGCGCCTT-CG TGTGTTCACTCCCCG TERM 24 60411 - 60381 - TR 93 -21.2 -3.06183 | opp_overlap 60367 60376 60381 TGCAGTCCGACGTAA GGCGCTCGGCCG TGCTCTT CGGCCGAGCGCC TTCGTGTGTTCACTC TERM 25 60381 - 60411 + Tr 100 -21.2 -3.38207 | opp_overlap 60381, overlap 60367 60376 TGCAGTCCGACGTAA GGCGCTCGGCCG TGCTCTT CGGCCGAGCGCC TTCGTGTGTTCACTC SCO0072 64093 - 60740 - | secreted protein TERM 26 61623 - 61641 + g 71 -4.5 -4.28762 | gap 1, overlap 61627 61637 TTGTAGGTGTACGTG GTGCC-GC CCGG GCAGGCGC TTTTGCTGCCGTTCT TERM 27 63893 - 63929 + g 87 -20.1 -3.14344 | overlap 63902 GGGCGCCTTGATCGA GCCGGCCGGGGTCGCGG GAG CCTCGACCTTGGTCGGC TTCGTCCACGGACTC SCO0073 64605 - 64925 + | hypothetical protein SCO0074 64994 - 65092 + | hypothetical protein SCO0075 65092 - 65679 + | hypothetical protein SCO0079 67911 - 66688 - | integral membrane transport protein TERM 28 68279 - 68295 + H 70 -4.3 -4.33417 | opp_overlap 68279, overlap 68270 68275 CGATCAGTCGAGATA CGGCTTC TAA GACGTCG TTTCTTATGGCTGGC SCO0080 68372 - 68887 + | hypothetical protein SCO0083 69799 - 70647 + | transposase TERM 29 71057 - 71034 - g 75 -7.4 -4.2828 | gap 1 CGGCACGGACGAAAA GAGCCG-TGGC CTG GTCATCGGCTC GAACGGCGGCGGCCT SCO0084 70777 - 71235 + | hypothetical protein SCO0085 72139 - 71648 - | hypothetical protein SCO0086 73097 - 72159 - | ribosylglycohydrolase (secreted protein) SCO0087 74833 - 73784 - | secreted protein TERM 30 74765 - 74734 - G 76 -15.8 -3.32844 | gap 1 CGGGGGAGGCGAGAA GCGGGGCGGCCGCGC CGA ACGCGGC-GCCGCGC AGCACCGTGCGCCGG SCO0088 75876 - 74917 - | secreted beta-lactamase TERM 31 76163 - 76137 - gR 80 -7.9 -4.4009 | gap 1, overlap 76138 GCTGACCGGAGAAAA GCGGCTGCGGAC GCTG GCCCGCCGC-GC CGGGGATGGCGAACT SCO0089 75856 - 76893 + | transcriptional regulator SCO0090 77314 - 76895 - | transposase SCO0091 77315 - 78271 + | IS1652 transposase SCO0095 79702 - 78983 - | hypothetical protein SCO0096 80690 - 79839 - | noncomposite transposon transposase SCO0097 81165 - 80845 - | integral membrane protein SCO0098 82441 - 81602 - | transposase SCO0101 83992 - 83516 - | hypothetical protein SCO0102 84893 - 85339 + | hypothetical protein SCO0103 85336 - 86643 + | flavohemoprotein TERM 32 86841 - 86855 + G 70 -12.8 -3.39803 | GACGCCAGCTTCCGC GCCGGG CCG CCCGGC TTCTGCGTCTCCCTG SCO0104 86640 - 87311 + | hydrolase TERM 33 87658 - 87607 - T 76 -8.7 -4.21607 | gap 1, opp_overlap 87632 TGGAGCGAAGAGAAA CGAGATG-CAGATCGACGCCACCG AGCCG CAGCGGGGTCGGTTCGACATCTCG CCGCCGACCCGTCCG TERM 34 87895 - 87841 - T 86 -18.8 -3.15544 | overlap 87851 GCCGATTCCCAGCAA TGCGACCAC-AGTTGTGGGCCCCGCC ACGTA GACGGGGCCCACAACCCGTCGTC-CA CCGGCCAGAGGTCAA TERM 35 87885 - 87851 - T 93 -23.7 -2.81173 | overlap 87841 AGCAATGCGACCACA GTTGTGGGCCCCGCC ACGTA GACGGGGCCCACAAC CCGTCGTCCACCGGC SCO0105 88632 - 87907 - | endo-1,4-beta-xylanase (secreted protein) SCO0106 89073 - 89465 + | insertion element transposase SCO0107 90043 - 89486 - | aminoglycoside nucleotidyltransferase SCO0108 90242 - 90391 + | hypothetical protein SCO0109 90865 - 90395 - | hypothetical protein SCO0110 91790 - 90951 - | DNA-binding protein TERM 36 91204 - 91218 + g 70 -12.8 -3.39327 | opp_overlap 91194 ACGAAGTCCTGCCAT CGCGGG TCG CCCGCG TTCTGGCTGTAGCGA SCO0111 91977 - 92729 + | oxidoreductase SCO0112 92928 - 92773 - | hypothetical protein SCO0116 94872 - 94306 - | TetR family transcriptional regulator SCO0117 94989 - 95681 + | short chain dehydrogenase SCO0118 95989 - 97518 + | xylosidase/arabinosidase TERM 37 97721 - 97683 - T 83 -16.6 -3.28791 | overlap 97684 ATCCCTTGCGCACAA GGCCCGCGGTTCCAGCAC CGA GTGCCGCTACCGCGGGCT TGGGGCCTGCACAGA TERM 38 97720 - 97684 - T 85 -20.1 -2.57132 | overlap 97683 TCCCTTGCGCACAAG GCCCGCGGTTCCAGCAC CGA GTGCCGCTACCGCGGGC TTGGGGCCTGCACAG SCO0119 98281 - 97760 - | small secreted protein SCO0120 99338 - 98463 - | integral membrane protein SCO0121 99949 - 99335 - | ABC transport system ATP-binding protein SCO0122 100190 - 101566 + | flavin-containing monooxygenase (putative secreted protein) SCO0123 103002 - 101656 - | hypothetical protein SCO0124 103628 - 104989 + | hypothetical protein SCO0125 105057 - 106640 + | oxidoreductase SCO0126 106637 - 112885 + | beta keto-acyl synthase TERM 39 117171 - 117204 + G 74 -16.7 -3.08679 | gap 1 CGCCCCGGCACGGCT CCGGCTGCGGTCCCCG TCC CGGGGGC-GAAGCCGG TGTTCGATCGGGCCC SCO0127 112932 - 119654 + | beta keto-acyl synthase SCO0128 119651 - 119833 + | hypothetical protein SCO0129 119841 - 120215 + | hypothetical protein SCO0130 120457 - 121371 + | beta-lactamase TERM 40 121555 - 121592 + T 82 -17.7 -3.14344 | ATCACGACGCCCCCT TCGTCCGGTGCCCGGTG ATCG TGCCGTGCACCGGACGG TTCCTCCGCGAGATG SCO0131 122456 - 121617 - | secreted protein TERM 41 122737 - 122723 - H 72 -5.6 -4.36914 | opp_overlap 122723 CGGTTTTGGATAAAA TCGCGC AAG GGGCGA TGCTTATGGTGAGAA SCO0132 122743 - 125502 + | transcriptional regulator SCO0133 126005 - 125625 - | hypothetical protein TERM 42 126778 - 126800 + r 72 -3.2 -4.55697 | overlap 126779 GTTTGCAGTGCCGAC CGGCGGATCG CCT CACTCCGCCC TTTCTTTCTCCCAGT SCO0134 127294 - 126989 - | hypothetical protein SCO0135 127571 - 128290 + | hypothetical protein TERM 43 128357 - 128311 - T 85 -18.8 -2.99471 | gap 3, overlap 128314 CGACGCTCACACAGA GCACCGTCGGGCGGTCGGCCGGG AGAG CCC--CCGGCCGCCCGACGG-GC GAAACGGCGAGTGAG TERM 44 128355 - 128314 - T 86 -20.2 -2.72799 | gap 2, overlap 128311 CGCTCACACAGAGCA CCGTCGGGCGGTCGGCCGGG AGAG CCC--CCGGCCGCCCGACGG GCGAAACGGCGAGTG ulaA 130184 - 128634 - | ascorbate-specific PTS system enzyme IIC SCO0137 131001 - 130201 - | sugar-transport protein TERM 45 131159 - 131147 - H 75 -5.5 -4.49756 | overlap 131148 CCGGAAACAGGAAAA CGGTC GAC GACCA GGAATGGACGCGCCG SCO0138 131523 - 132296 + | short chain dehydrogenase SCO0139 132327 - 132647 + | hypothetical protein SCO0140 132693 - 133520 + | merR family transcriptional regulator SCO0141 134121 - 133570 - | calcium-binding protein SCO0142 136100 - 134295 - | hypothetical protein SCO0143 136647 - 137183 + | hypothetical protein SCO0144 137197 - 137556 + | hypothetical protein SCO0145 137561 - 138589 + | secreted protein TERM 46 139096 - 139114 + G 71 -4.4 -4.32034 | overlap 139097 GAGGGCGGTGTGCTC GCGGACCG GCG CGTTCCGA TTTTGCTGATCGTGG SCO0147 138976 - 139467 + | transmembrane transport protein SCO0148 139467 - 139712 + | transcriptional regulatory protein SCO0149 140299 - 139703 - | hypothetical protein SCO0150 140368 - 140862 + | hypothetical protein SCO0151 141370 - 141708 + | integral membrane protein TERM 47 142718 - 142734 + G 83 -5.8 -4.71426 | gap 1, overlap 142710 TGGCGGTGTCCTGGT CGC-GGC CCTG GCCTGCG TTTTGTTCCTCACGG SCO0152 141705 - 143315 + | transmembrane transport protein SCO0153 144363 - 143776 - | secreted protein SCO0154 145366 - 144704 - | hypothetical protein SCO0156 146351 - 146034 - | hypothetical protein SCO0155 145499 - 146122 + | transcriptional regulatory protein SCO0157 146603 - 146980 + | hypothetical protein SCO0158 146977 - 148206 + | oxidoreductase TERM 48 148298 - 148259 - g 70 -16.5 -2.63715 | gap 2 ATCGATTCGACACCA GCCGGTTCGAGGCCAGCCG GAAC CGGCTGGCCTCG--CTGGC GTACCGGCTACTGGG SCO0159 148216 - 149184 + | ECF sigma factor SCO0160 150209 - 149508 - | DNA-binding protein SCO0161 150525 - 150181 - | hypothetical protein TERM 49 151261 - 151229 - g 72 -12 -3.68506 | gap 1, overlap 151219 CAAGAGCGACGGAAA GGCCCCCGTCCGCGA CTTC TC-CGGACGCAGGCC GGTGCCCGACCGGGG SCO0162 150579 - 151571 + | hypothetical protein SCO0163 151749 - 153275 + | hypothetical protein SCO0164 153398 - 155728 + | cation-transporting ATPase SCO0165 156120 - 155707 - | hypothetical protein SCO0166 156338 - 157141 + | regulator SCO0167 158073 - 157189 - | hypothetical protein SCO0168 158732 - 159304 + | regulator protein SCO0169 159372 - 160025 + | hypothetical protein SCO0170 161027 - 160356 - | hypothetical protein SCO0171 161237 - 162553 + | nicotinate phosphoribosyltransferase SCO0172 162661 - 163119 + | hypothetical protein SCO0173 164017 - 163235 - | hypothetical protein TERM 50 163524 - 163502 - G 76 -11.9 -3.85698 | overlap 163469 GTGCCGGTCCAGAAA GCGCCCCGC GTAGT GCGCGGCGC ACGAGGCCACCGCCG TERM 51 163529 - 163574 + g 71 -11 -3.76224 | gap 1, opp_overlap 163547 GTGCGCGGCGCACGA GGCCACCGCCGCCACGAACAG CTCCA CAGG-CGTGGGGGCGGTGTCC TTTCCTCCGTCGGCG SCO0174 164994 - 164023 - | DNA-binding protein SCO0175 165406 - 165059 - | hypothetical protein SCO0176 165460 - 165855 + | hypothetical protein SCO0177 166033 - 166614 + | membrane protein SCJ126 SCO0178 166891 - 167337 + | hypothetical protein SCO0179 168514 - 167444 - | zinc-containing dehydrogenase SCO0180 169556 - 168705 - | hypothetical protein SCO0181 170570 - 169584 - | hypothetical protein SCO0182 170880 - 170656 - | hypothetical protein SCO0183 170911 - 172158 + | deoxiribopirymidine photolyase SCO0184 172170 - 173984 + | hypothetical protein SCO0185 173768 - 174946 + | geranylgeranyl pyrophosphate synthase SCO0186 174943 - 176514 + | phytoene dehydrogenase (phytoene desaturase) (secreted protein) SCO0187 176501 - 177496 + | phytoene synthase SCO0188 177493 - 178503 + | methylesterase SCO0189 180087 - 178519 - | dehydrogenase TERM 52 178648 - 178602 - G 73 -17.2 -2.62616 | GGACCGTCCACAGGA CCTGACCACGCACTCCCCGGTC GGC GAGCAGGGCGTTCGCGGCCAGG AAGCCGGTGGTGGCG SCO0190 180824 - 180084 - | methyltransferase SCO0191 182038 - 180821 - | lycopene cyclase SCO0192 183559 - 182309 - | oxidoreductase SCO0193 184797 - 183793 - | DNA-binding regulator TERM 53 184841 - 184821 - H 75 -11.1 -3.94409 | opp_overlap 184821 TATACGACGCACAAA CGACGCATG TTG CTTGCGTCG TTTCCTCACCCAACA SCO0194 184958 - 185566 + | sigma factor SCO0195 185675 - 186361 + | lipoprotein SCO0196 186483 - 186887 + | hypothetical protein SCO0197 187459 - 187019 - | hypothetical protein SCO0198 188858 - 187992 - | hypothetical protein SCO0199 189886 - 188864 - | alcohol dehydrogenase SCO0200 190830 - 189925 - | hypothetical protein SCO0201 191654 - 190983 - | integral membrane protein SCJ1213c SCO0202 191919 - 192848 + | hypothetical protein SCO0203 194637 - 192880 - | two-component sensor SCO0204 195461 - 194760 - | LuxR family two-component response regulator SCO0207 196991 - 196386 - | hypothetical protein SCO0208 197221 - 199917 + | pyruvate phosphate dikinase TERM 54 200188 - 200146 - g 83 -8.3 -4.57569 | gap 2, overlap 200148 CCACCTCCGGAAAAA GGTCGCCGCCGTGCTCGACCG TCC CGGCCT-GC-CGCCGGCGAGC GGCGAGGTGCGCGTC SCO0209 200024 - 200428 + | hypothetical protein SCO0210 200728 - 201369 + | hypothetical protein SCO0211 201374 - 202090 + | hypothetical protein SCO0212 202843 - 202370 - | hypothetical protein SCO0213 204101 - 202863 - | nitrate/nitrite transporter protein SCO0214 204387 - 204800 + | hypothetical protein SCO0215 205888 - 204881 - | hypothetical protein SCO0216 206480 - 210181 + | nitrate reductase alpha chain NarG2 SCO0217 210183 - 211751 + | nitrate reductase beta chain NarH2 SCO0218 211748 - 212551 + | nitrate reductase delta chain NarJ2 SCO0219 212551 - 213321 + | nitrate reductase delta chain NarI2 SCO0220 213427 - 213870 + | hypothetical protein SCO0222 214913 - 215446 + | acetyltransferase SCO0223 215443 - 215559 + | hypothetical protein SCO0224 216844 - 215807 - | hypothetical protein SCO0225 217268 - 216834 - | hypothetical protein SCO0226 218019 - 217315 - | hypothetical protein SCO0227 218780 - 218418 - | hypothetical protein SCO0228 218973 - 219059 + | hypothetical protein TERM 55 219248 - 219234 - f 81 -2.8 -4.99861 | opp_overlap 219234 CAGTAACGAGAAAAA TCGACA GGG TGTAGA TTCATTGCTCAAGAG SCO0229 219302 - 220150 + | short chain dehydrogenase SCO0230 220150 - 220764 + | TetR family transcriptional regulator SCO0231 221247 - 221092 - | hypothetical protein SCO0232 221599 - 221414 - | hypothetical protein SCO0233 222538 - 221699 - | DNA-binding protein TERM 56 222996 - 222978 - g 80 -10.3 -4.16016 | GGACCGTGGAAGAAA TCCGCAC TCCGG GTGCGGA AGCCGTCGCCGTGCA SCO0234 222827 - 223288 + | oxidoreductase SCO0235 223294 - 224232 + | short chain dehydrogenase SCO0236 225276 - 224404 - | DNA-binding protein SCO0237 225476 - 226237 + | oxidoreductase SCO0238 226481 - 227008 + | hypothetical protein SCO0239 228154 - 227081 - | hypothetical protein TERM 57 228509 - 228554 + r 71 -16.1 -2.64735 | gap 1 TGCCCTCGTTCCGTC TCCGGCCGAAGCCGGCTGACAC GGC GCGTCGGTCGGCC-CGGCTGGA TGCTCTCCGTCGGCT SCO0240 229649 - 228714 - | oxidoreductase SCO0241 229995 - 230669 + | transcriptional regulator SCO0242 231022 - 231465 + | hypothetical protein SCO0243 231475 - 231654 + | hypothetical protein SCO0244 232508 - 233518 + | secreted protein SCO0245 234873 - 233854 - | integral membrane protein SCO0246 236207 - 234870 - | integral membrane protein SCO0248 238251 - 237664 - | hypothetical protein TERM 58 237748 - 237768 + Gg 75 -13.3 -3.61398 | ATGGTGGCCGCGGAA GTCGTCGAC GAG GTCGGCGAC TTCTTCGAAGGCGAC SCO0247 236782 - 237807 + | hypothetical protein TERM 59 238237 - 238274 + gT 70 -12.7 -3.33696 | gap 1, overlap 238222 CACCGGCCGGCTCGC CT-TCGGGACGGGCACGG TGT CCGTTCCCGTGCCGGCAG TTCCTTCAGGAGCGC SCO0249 239794 - 238280 - | hypothetical protein SCO0250 239858 - 240523 + | transcriptional regulator SCO0251 240843 - 240559 - | hypothetical protein SCO0252 242123 - 240876 - | oxidoreductase SCO0253 242194 - 242766 + | TetR family transcriptional regulator SCO0254 243762 - 243022 - | hypothetical protein SCO0255 245672 - 243936 - | sigma factor SCO0256 245986 - 246783 + | short chain oxidoreductase SCO0257 246868 - 247869 + | hypothetical protein SCO0258 247871 - 248680 + | hypothetical protein SCO0259 248677 - 249702 + | alcohol dehydrogenase (zinc-binding) SCO0260 249755 - 250084 + | hypothetical protein SCO0261 250691 - 250164 - | acetyltransferase SCO0262 250805 - 251740 + | LysR family transcriptional regulator SCO0263 252879 - 251764 - | oxidoreductase SCO0264 252946 - 253398 + | transcriptional regulator SCO0265 253499 - 254290 + | hydroxylase SCO0266 255309 - 254332 - | transcriptional regulator SCO0267 255311 - 256087 + | hydrolase SCO0268 256281 - 256442 + | hypothetical protein TERM 60 256473 - 256497 + F 91 -18.5 -3.64703 | TCGGGGCTCTTCCGA GCGGGGCGGCC CGA GTCCGCCCCGC TTTCCGTACGACGGC SCO0269 256526 - 259687 + | hypothetical protein SCO0270 259684 - 261084 + | hypothetical protein SCO0271 261366 - 262319 + | binding-protein-dependent transport protein SCO0272 262330 - 263220 + | binding-protein-dependent transport protein SCO0273 263285 - 264634 + | substrate binding protein SCO0274 264764 - 266263 + | alpha-galactosidase SCF8502 SCO0275 266356 - 267513 + | transcriptional repressor protein SCO0276 267585 - 268838 + | oxidoreductase SCO0277 269688 - 269020 - | hypothetical protein TERM 61 270132 - 270163 + G 71 -10.8 -3.72324 | gap 1 AGCTGGGCATCGAGG CGGTGGCGTCGCCCG TCG CGGGTGA-GCTTCCG TTCTTCCTGACCGTC SCO0278 269783 - 270397 + | MutT domain-containing protein SCO0279 270477 - 271748 + | glycosyl hydrolase TERM 62 271734 - 271778 + T 70 -13.6 -3.22475 | gap 2, overlap 271732 GAGCTGTACACCGGT CGGGGACGTGAGTGAGACGGGC GCC GCCCGGG-CG-TCACGTCCCCG TGTTGTCCGCGTCGG SCO0280 272469 - 271768 - | hypothetical protein SCO0281 272834 - 272466 - | hypothetical protein SCO0282 272892 - 273656 + | deoR family transcriptional regulator SCO0283 274595 - 274101 - | hypothetical protein SCO0284 274763 - 276805 + | secreted alpha-galactosidase SCO0285 276938 - 278827 + | sodium/proton antiporter SCO0286 279416 - 278910 - | secreted peptidoglycan binding protein SCO0287 279691 - 280695 + | regulatory protein SCO0288 281132 - 280692 - | hypothetical protein TERM 63 280753 - 280721 - G 71 -4.7 -4.2828 | opp_overlap 280721 TGCGAGTGAGGAAAA GTCCCGGACGTCTTC CGC GAGGAGCTCCGGCAC TTCCATCGCGGCTAA SCO0289 282157 - 281129 - | transcriptional regulator SCO0290 282491 - 283801 + | solute-binding protein SCO0291 283798 - 284700 + | binding protein dependent transport protein SCO0292 284702 - 285598 + | sugar ABC-transporter integral membrane protein SCO0293 285714 - 288104 + | beta-xylosidase SCO0294 288840 - 288187 - | acetyltransferase SCO0295 290456 - 288987 - | transmembrane efflux protein SCO0296 290584 - 291165 + | transcriptional regulator SCO0297 291315 - 292592 + | secreted protein SCO0298 293519 - 292656 - | LysR family transcriptional regulator SCO0299 293613 - 294497 + | putative oxidoreductase SCO0300 296305 - 294494 - | monooxygenase TERM 64 296427 - 296410 - H 75 -11.3 -3.96068 | opp_overlap 296410 CTACGGTAACAAGAA CCGGACA AGGT TGTCCGG TTGGCTGCGGGTTGC SCO0301 296471 - 297499 + | lipoprotein SCO0302 298108 - 297515 - | TetR family transcriptional regulator SCO0303 298311 - 298105 - | secreted protein SCO0304 298836 - 298468 - | hypothetical protein SCO0305 299213 - 302092 + | hypothetical protein TERM 65 303382 - 303350 - g 70 -17 -2.70932 | gap 1 GCTCTCGGGCAAGGA CGCCGGCCGA-CCGC TGGG GCGGCCCGGCCGGCA GGTCCGTCCCCAGTT SCO0307 303084 - 303971 + | DNA-binding protein TERM 66 304044 - 304068 + G 73 -6.4 -4.34402 | gap 1 CCACGGTCCGACGCA GCAGTCAGGGT TCGT ACCC-GCCTGC TTTTGATGTACCACC SCO0308 304026 - 305429 + | hypothetical protein SCO0309 306625 - 305537 - | amide hydrolase SCO0310 307466 - 306816 - | TetR family transcriptional regulator TERM 67 307827 - 307793 - g 73 -15.1 -3.28712 | GGTCGCCCTCTACAA GGCGGGC-CTGACCCGG GCG CCG-GTCAACGCCCGCC TCGGCGACGGCGAAG SCO0311 307575 - 309131 + | ligase SCO0312 309147 - 310316 + | acyl-CoA dehydrogenase SCO0313 310378 - 311727 + | transmembrane transport protein SCO0314 311724 - 313670 + | secreted protein SCO0315 315055 - 313697 - | decarboxylase SCO0316 316921 - 315254 - | DNA-binding protein SCO0317 318237 - 316975 - | transmembrane transport protein SCO0318 319345 - 318329 - | oxidoreductase SCO0319 320008 - 319499 - | hypothetical protein SCO0320 320110 - 320583 + | hypothetical protein TERM 68 321866 - 321885 + G 76 -11.4 -3.8377 | gap 1 CTCGCCGAAGTCCAC GCCCGGGCC GGC GGC-CGGGC TTTCCTGTCCCGCTT SCO0321 320699 - 322255 + | carboxylesterase SCO0322 323938 - 322244 - | ABC transport ATP-binding subunit TERM 69 324100 - 324120 + r 73 -11.1 -3.73647 | opp_overlap 324068 CACGCCGCACCCATT GGCAAGACG ATA CGTCTCGCC TTGTTCGTCGGTGCG TERM 70 324420 - 324440 + r 70 -12.5 -3.28712 | CTGAGCGCCGGTCCG GCCGCAGCG AAT CCCTGCGGC TTCTACGAGACCGCC SCO0323 325069 - 324467 - | hypothetical protein SCO0324 327616 - 325238 - | secreted protein SCO0325 327899 - 328264 + | hypothetical protein SCO0326 328333 - 329301 + | hypothetical protein TERM 71 329724 - 329682 - f 95 -13.2 -4.59773 | overlap 329684 CGGGAGCCCGAAAAA GGGGCAGGACTGGCCGGGCG AGG CACTCGGCCGGTCCCGCGGC GGGCTGACCACAAAG TERM 72 330029 - 329988 - f 73 -14.3 -3.29947 | CATCGACCAGATCAA CGGCCGCATCCGCAGGGGC GAGA GCCTCTGCCGACTCGACCG GGCGGCCTACCGGCG SCO0329 330235 - 331365 + | esterase fabG 331504 - 332253 + | 3-ketoacyl-(acyl-carrier-protein) reductase TERM 73 332999 - 333034 + G 70 -16.8 -2.62184 | gap 1, opp_overlap 332997 332998 AGGTGGCGGACAAGC TCGCCGCGCTCGCGCCC GAG GGG-GCGAGCGCGACGC TGGTCTCCGAAGAGA SCO0331 332311 - 333210 + | short chain oxidoreductase (secreted protein) SCO0332 333529 - 334149 + | transcriptional regulator SCO0333 335734 - 334223 - | dioxygenase (secreted protein) SCO0334 335948 - 336292 + | secreted protein SCO0335 336333 - 339467 + | secreted protein SCO0336 340630 - 339521 - | integral membrane protein SCO0337 340752 - 341318 + | transcriptional regulator SCO0338 341909 - 341370 - | dehydrogenase SCO0339 341992 - 342561 + | dehydrogenase SCO0340 343165 - 342578 - | hypothetical protein SCO0341 345663 - 343234 - | large secreted protein TERM 74 345747 - 345784 + r 79 -17 -3.01712 | gap 1 GCCCGCGCCCACCGC ACCCCGGGCAGCG-GCT CGTGC GGCACGCTGCCCGGGGG TGTTCGCCGGGGGGC SCO0342 347706 - 345817 - | secreted protein TERM 75 347481 - 347491 + g 71 -4.6 -4.23723 | CCTTGTCGCGGATGT GGTC GCG GGCC TTTTCGATGGTCTTG SCO0343 347814 - 348083 + | hypothetical protein SCO0344 348137 - 349381 + | GntR family DNA-binding regulator SCO0345 350201 - 349419 - | IclR family regulatory protein TERM 76 349562 - 349530 - G 70 -16.2 -2.72463 | overlap 349516 ACTGACGGCGAAGGA CCGGCCGCCCCCGG CCGGT CCGGGAACGGCCGC CGCCACGCACACGAT SCO0346 350474 - 351352 + | 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase SCO0347 351529 - 352779 + | racemase SCO0348 352776 - 353795 + | 2-hydroxyacid dehydrogenase SCO0349 353801 - 354805 + | oxidoreductase (secreted protein) SCO0350 354802 - 355686 + | hypothetical protein SCO0351 355683 - 357158 + | hypothetical protein SCO0352 357209 - 358477 + | solute-binding protein SCO0353 358481 - 359392 + | binding protein dependent transport protein TERM 77 359432 - 359399 - g 81 -4.3 -4.71828 | opp_overlap 359401, overlap 359401 ATCGGATGAAGAAAA CACTCACCTCGGCCG CCAC CGTCCGGGGCGCGTT CGTCTCCCTGGTGTC SCO0354 359389 - 360231 + | binding-protein-dependent transport protein SCO0355 360305 - 360646 + | hypothetical protein SCO0356 360674 - 361465 + | oxidoreductase TERM 78 361706 - 361745 + T 100 -22.9 -3.25282 | AGCCCGCATCGCCGC GCGGCCGAGGCGCCCGT GCGAGG ACGGGTCCCTCGGCCGC TTCGTGGTGCTTCCT SCO0357 362478 - 361759 - | GntR family regulator SCO0358 362635 - 363777 + | racemase SCO0359 363774 - 364496 + | hypothetical protein SCO0360 365551 - 364559 - | LacI family DNA-binding transcriptional repressor SCO0361 366795 - 365623 - | hypothetical protein TERM 79 366970 - 366953 - g 82 -14.1 -3.85698 | opp_overlap 366965 GCCTCGCGCGACAAA CCCGGCG TCCT CGCCGGG TACCGGGTCCTCGAC SCO0362 366935 - 368146 + | racemase SCO0363 368143 - 369252 + | integral membrane protein SCO0364 369249 - 370055 + | enoyl-CoA hydratase SCO0365 370066 - 370812 + | oxidoreductase (secreted protein) SCO0366 370809 - 371876 + | hypothetical protein SCO0367 372478 - 371921 - | hypothetical protein TERM 80 372582 - 372539 - H 77 -10.4 -4.07568 | gap 3 GGCGCCCGCGGAAAA GGTCA--GCAGCCGCGCGGCC CACGT GTCCGCGCG-CTGCCGTGACC CCGGTGGCGGGTCCC SCO0368 373045 - 374001 + | transposase SCO0369 377255 - 373998 - | secreted protein SCO0370 380690 - 377286 - | DNA-binding protein (secreted protein) TERM 81 378020 - 378057 + g 84 -14.9 -3.71848 | gap 1, overlap 378021 378023 378031 GCACGCCGGTGGCCG GGAGAGCGGCG-GCGG TGCGCAC CCGCGCGCCGCTCTCG TTGTTGATCAGGAAG TERM 82 378021 - 378056 + g 79 -18.4 -2.82895 | gap 1, overlap 378020 378023 378031 CACGCCGGTGGCCGG GAGAGCGGCG-GCGG TGCGCAC CCGCGCGCCGCTCTC GTTGTTGATCAGGAA SCO0371 383360 - 380751 - | secreted protein TERM 83 383382 - 383392 + r 72 -5.4 -4.32049 | GGGCTCAGCTCCCTT CGAT TGA ATCG TTTTACTCGATTCTC TERM 84 383519 - 383551 + r 100 -19.2 -4.23892 | gap 1 GGAACGGGCATGACC CGGCGCGGACGG-GC CTCG GCACCGTCCGCGCTG TTTTGAATCGTTCAA SCO0372 386592 - 383578 - | secreted protein TERM 85 386476 - 386434 - G 74 -17.5 -2.70932 | GGGGTCGGCGAACCA CCGGGCCGGGCCGGCGGCC CGGTC GGCGGCCGGGCCGGCGGGG AGGGCGGCGACGCCG SCO0373 387360 - 386761 - | secreted protein TERM 86 388487 - 388538 + G 73 -15 -3.21099 | gap 1 GCGCACGCTGTCCGC CGCGCCG-CGCACCCTGCGGATCGC CGT GCTGTCCGCAGCGGCCGGCGGCGTG TTCCTCGTCGCGACC SCO0374 387750 - 389519 + | ABC transport protein SCO0375 391123 - 389531 - | integral membrane transport protein SCO0376 391232 - 391834 + | transcriptional regulator SCO0377 392483 - 391950 - | hypothetical protein SCO0378 393218 - 392484 - | hypothetical protein SCO0379 393498 - 394961 + | catalase SCO0380 395065 - 395460 + | hypothetical protein SCO0381 395939 - 397414 + | glycosyl transferase SCO0382 397485 - 398810 + | UDP-glucose/GDP-mannose family dehydrogenase SCO0383 398881 - 400104 + | hypothetical protein TERM 87 400793 - 400811 + G 71 -10.2 -3.75024 | overlap 400762 400760 GCGGCTGCAGCTGAT CGGCGGCG GCG CGCTGCTG TTCTTCGTGCTCGCC SCO0384 400179 - 401468 + | hypothetical protein SCO0385 401465 - 403030 + | hypothetical protein SCO0386 403034 - 404968 + | asparagine synthetase SCO0387 405070 - 407250 + | bi-domain-containing oxidoreductase TERM 88 408008 - 407954 - g 72 -11.4 -3.61398 | opp_overlap 407958 TTCGTCGGCGAACAA CCACGTCG-TGGCGGAGGCCGCGG GGCAGTTGG CCGCGGCCTGCGCCTTCGG-GTGG TTCCCCGAGTCGGCA SCO0388 407253 - 409214 + | hypothetical protein SCO0389 409237 - 410772 + | lipoprotein SCO0390 410774 - 412006 + | hypothetical protein SCO0391 412009 - 413250 + | transferase SCO0392 413247 - 414497 + | methyltransferase SCO0393 414494 - 415303 + | transferase SCO0394 415300 - 415947 + | hypothetical protein SCO0395 415951 - 416976 + | epimerase/dehydratase SCO0396 416973 - 418247 + | hypothetical protein SCO0397 418253 - 419542 + | integral membrane protein TERM 89 419709 - 419664 - g 70 -13.9 -3.30124 | gap 1 GGTGATCTCCGACAA CGCGTCG-ACCGACGGCACCCG GGA CATCTGCCGCCGGTACGCCGCG CAGGACTCGCGCATC SCO0398 419539 - 420486 + | glycosyl transferase SCO0399 420492 - 421715 + | hypothetical protein SCO0400 421712 - 422263 + | epimerase SCO0401 422271 - 423596 + | glutamate-1-semialdehyde 2,1-aminomutase SCO0402 424406 - 423654 - | integral membrane protein SCO0403 425226 - 424609 - | hypothetical protein SCO0404 425243 - 425983 + | 2-haloalkanoic acid dehalogenase SCO0405 426833 - 426015 - | hypothetical protein SCO0406 426893 - 427606 + | hypothetical protein SCO0407 427610 - 428614 + | transcriptional regulator SCO0408 428615 - 429403 + | methyltransferase TERM 90 429474 - 429445 - T 100 -20.7 -3.89215 | GCGGAGAAATGCAAA CGGGGGCTCCGCC GTAC GGTGGAGCCCCCG GCCGGTCCGGCGCCG SCO0409 429956 - 429492 - | spore-associated protein precursor SCO0410 431321 - 430071 - | hypothetical protein SCO0411 431327 - 431551 + | hypothetical protein SCO0412 431551 - 431934 + | hypothetical protein SCO0413 432564 - 431962 - | hypothetical protein SCO0414 433513 - 432617 - | RNA polymerase sigma factor SCO0415 433615 - 433977 + | membrane protei SCO0416 434589 - 433984 - | integral membrane protein SCO0417 435397 - 434651 - | hypothetical protein SCO0418 435456 - 436103 + | DNA-binding protein SCO0419 436235 - 437224 + | zinc-binding oxidoreductase SCO0420 438287 - 437253 - | homoserine dehydrogenase TERM 91 438354 - 438311 - R 75 -17.3 -2.62396 | gap 1 GATCCTCTCACACCA CCGGCCGCGAGCAGGCCGTC AGCGG GGCGGCC-GCGCGAGGCCGG AGCGGTAGGCGTGGG SCO0421 438988 - 438329 - | two-component response regulator SCO0422 440190 - 438997 - | two-component sensor kinase SCO0423 442579 - 440282 - | membrane transport protein TERM 92 441153 - 441203 + g 70 -16.1 -2.64616 | gap 2, opp_overlap 441151 GCCACGGAGACCACT CCGGCGGT-GGCGG-CGAGCCTGTC GGA GACGGCCGCGACCGCCGACCGCGGG TCGTCTGCCTGCCGG TERM 93 443019 - 442979 - g 78 -17.6 -3.15544 | GCGGAGTTCGAGGAA GCGCCGGGTCGC-CAGGTCG CGG CGGCCCGCGCGACCCG-CGC CTGCCCGGCCTCGGG SCO0424 442700 - 443191 + | hypothetical protein SCO0425 444243 - 443293 - | hypothetical protein SCO0426 444441 - 444671 + | hypothetical protein SCO0427 444752 - 445588 + | hydrolase SCO0428 445611 - 446144 + | tetR family transcriptional regulator SCO0429 447161 - 446214 - | oxidoreductase TERM 94 447313 - 447264 - g 93 -17.8 -3.78775 | gap 1 GTCCGGACCAGGAAA CGAGCGCT-GATCCCGGCCGGCC CGACC GGCCGGCCGGCGCCGAACGCCCG CTGCGCGCACACGCG SCO0430 447185 - 447868 + | tetR family transcriptional regulator SCO0431 449218 - 447890 - | secreted protein SCO0432 449515 - 453252 + | secreted peptidase TERM 95 453299 - 453271 - f 76 -16 -3.14132 | CCCGTCCGGCACGAA CGGTGTGCGGCG GATGA CGCCGCACACCC CCGCCGCGCCCTCCC SCO0433 453370 - 454374 + | transcriptional regulator SCO0434 454546 - 456195 + | bifunctional maltose and glucose-specific PTS system components IICB SCO0435 456192 - 457397 + | aminotransferase rpmF 457484 - 457654 + | 50S ribosomal protein L32 SCO0437 458695 - 457670 - | hypothetical protein SCO0438 459345 - 458695 - | pyrrolidone-carboxylate peptidase SCO0439 460367 - 459393 - | hypothetical protein SCO0440 461083 - 460364 - | integral membrane protein SCO0441 461350 - 462102 + | hypothetical protein SCO0442 462099 - 462857 + | hypothetical protein SCO0443 462854 - 463711 + | hypothetical protein SCO0444 464099 - 463698 - | integral membrane protein SCO0445 465502 - 464207 - | secreted protein SCO0446 465861 - 465496 - | hypothetical protein SCO0447 465990 - 466436 + | MarR family regulatory protein SCO0449 468153 - 469232 + | secreted solute-binding lipoprotein SCO0450 470304 - 469315 - | integral membrane protein SCO0451 471209 - 470355 - | hypothetical protein SCO0452 471415 - 472314 + | SIR2-like regulatory protein SCO0453 472458 - 473747 + | secreted solute-binding lipoprotein SCO0454 473848 - 474789 + | binding-protein dependent transport protein SCO0455 474804 - 475631 + | binding-protein dependent transport protein TERM 96 475754 - 475732 - g 73 -11.2 -3.9461 | GGCCTTCAACAACAA GGGCCGGCTC TCC GAGGCGACCC GCCGCCGGATCCTGG SCO0456 475628 - 476671 + | LacI family transcriptional regulator SCO0457 476738 - 478672 + | hypothetical protein SCO0458 478669 - 480957 + | Beta-glucosidase SCO0459 481012 - 481791 + | hypothetical protein SCO0460 482319 - 481810 - | hypothetical protein SCO0461 482456 - 483325 + | hydrolase SCO0462 484267 - 483338 - | oxidoreductase SCO0463 484318 - 484932 + | hypothetical protein SCO0464 486670 - 484973 - | integral membrane protein SCO0465 487514 - 486684 - | non-heme chloroperoxidase (chloride peroxidase) SCO0466 487618 - 488601 + | AraC family transcription regulator SCO0467 488614 - 489357 + | hypothetical protein SCO0468 490350 - 489373 - | hypothetical protein SCO0469 490451 - 490972 + | hypothetical protein SCO0470 490983 - 491891 + | hydrolase SCO0471 491901 - 492881 + | AraC family transcription regulator SCO0472 494263 - 493055 - | secreted protein SCO0473 495249 - 494260 - | solute-binding lipoprotein SCO0474 496493 - 495246 - | lipoprotein SCO0475 497359 - 496508 - | ABC transporter protein, integral membrane subunit SCO0476 497375 - 498133 + | ABC transport protein, ATP-binding subunit SCO0477 498238 - 498630 + | hypothetical protein SCO0478 499807 - 498683 - | hypothetical protein SCO0479 500776 - 499952 - | putative phosphatase SCO0480 500780 - 501412 + | hypothetical protein SCO0481 501699 - 502217 + | secreted chitin binding protein SCO0482 502342 - 503076 + | secreted chitinase SCO0483 503474 - 503073 - | secreted protein SCO0484 504705 - 503539 - | monooxygenase TERM 97 504768 - 504782 + H 84 -2.8 -5.1675 | opp_overlap 504768 GAAACGAGTGAGAAA CTGCAA CTG TTCCAG TTTTTTAGTCACTGC SCO0485 504854 - 505465 + | TetR family transcriptional regulator SCO0486 506670 - 505447 - | monooxygenase TERM 98 506997 - 506943 - g 72 -11.8 -3.61398 | TGCCGCGTTCAACAA GGGGCGGCTCACGGAACGCGCCGCCG AGG CGGCCGGACTCGCCCTGGACCGCCCC GCCATGGGCGTGCTG SCO0487 506842 - 507348 + | MarR family transcriptional regulator TERM 99 509625 - 509601 - g 71 -9.2 -3.8512 | GATGTACGAGAAGAA CGGCTGGACG GGCGA CGCCCAGCTG GGCACGCCGGTCATG SCO0488 507394 - 510810 + | hydrolase SCO0489 511035 - 510823 - | hypothetical protein SCO0490 511124 - 512215 + | esterase SCO0491 513924 - 512302 - | ABC transporter transmembrane protein SCO0492 524920 - 513989 - | peptide synthetase TERM 100 518093 - 518145 + g 70 -12.6 -3.35813 | gap 2 CCGCAGCCGCAGGGC CGGGTGGGCGCCGACGACGGCGCGCG CGG CGCGTTCCG-CGTCGGCGAA-ACCGG TTCCTTCGGGTGCGG TERM 101 520409 - 520378 - G 73 -10 -4.08216 | gap 1 CGAGGGTGTCGAAAA GCGCTCCGGCC-CCG GCC CGGCGGGCGATGCGC GCCAGCGAGACGTGC SCO0493 526783 - 524978 - | ABC-transporter transmembrane protein SCO0494 527838 - 526786 - | iron-siderophore binding lipoprotein SCO0495 528752 - 527889 - | iron-siderophore ABC-transporter ATP-binding protein SCO0496 529897 - 528791 - | iron-siderophore permease transmembrane protein SCO0497 530970 - 529894 - | iron-siderophore permease transmembrane protein SCO0498 532325 - 530970 - | peptide monooxygenase SCO0499 532501 - 533448 + | formyltransferase SCO0500 533773 - 533534 - | hypothetical protein SCO0501 535764 - 533812 - | secreted protein SCO0502 535974 - 536408 + | hypothetical protein TERM 102 536438 - 536454 + F 89 -7.9 -5.00616 | opp_overlap 536438, overlap 536439 GTTCCGTATATTTAA CCGGGAC AGC GTCCCGC TTTTTTCGCGCCGAC TERM 103 536439 - 536453 + F 72 -11.4 -3.60048 | opp_overlap 536438, overlap 536438 TTCCGTATATTTAAC CGGGAC AGC GTCCCG CTTTTTTCGCGCCGA SCO0503 536532 - 537512 + | hypothetical protein SCO0504 537623 - 538942 + | DEAD-box RNA-helicase SCO0505 539123 - 542131 + | large, multifunctional secreted protein nadE 542269 - 543099 + | NAD synthetase SCO0507 543535 - 543119 - | hypothetical protein TERM 104 543323 - 543275 - G 74 -16.6 -3.14132 | gap 1 GTCCGGGCCGATGAA CCCGCCGCCGC-GCACGCCGGGG TCGG CCGCCGCGTACAGCCGCGGCAGG GCTCCCCGTTCGGCG SCO0508 543545 - 544087 + | tetR family transcriptional regulator glpK 544194 - 545717 + | glycerol kinase TERM 105 546244 - 546259 + F 83 -7.6 -4.63218 | overlap 546243 GACCGAACTCTTTTC TGGACT TGCC AGTCCA TTTTATTCGCCGCAC SCO0511 546358 - 547116 + | dehydrogenase (secreted protein) SCO0512 547743 - 547135 - | regulatory protein TERM 106 547873 - 547837 - g 100 -17.2 -4.08216 | gap 1 TGAGCGCGGCGAAAA CCCGGGCCGCGCTGCGC ACCA GCGC-GCGCGTCTCGGG CGAGCTGCTGCTGAT SCO0513 547809 - 548900 + | integral membrane protein SCO0514 548968 - 549621 + | hypothetical protein SCO0516 550455 - 551633 + | lipoprotein TERM 107 551684 - 551651 - f 95 -23.9 -2.70932 | gap 1, opp_overlap 551651 GCCGGGGGCGAACCA GGGCCGGCCGG-CCCG TGC CGGGACCGACCGGCCC TTGGTGTCCCGGCCG TERM 108 551651 - 551684 + F 93 -21.7 -3.25823 | gap 1, opp_overlap 551651 GCCGGGGGCGAACCA GGGCCGGCCGG-CCCG TGC CGGGACCGACCGGCCC TTGGTGTCCCGGCCG TERM 109 551806 - 551749 - f 73 -14.9 -3.17075 | gap 3 TGCCCCCGAAGGGAA CGGCGAGA-GG-CGGCCGGACGA-GCGG CGGTC CCGGACCGTCGGGCCGACCGTCCCGCCG AGCGGTCCCCCCTCC SCO0517 551918 - 552115 + | hypothetical protein SCO0518 552094 - 552351 + | hypothetical protein SCO0519 553140 - 552403 - | oxidoreductase TERM 110 553245 - 553200 - H 100 -21.2 -3.70902 | opp_overlap 553203 TGCCCTAGAGTGAAA GTGGAGGCGCCGCCACTTCC ATCACA GTAAGCGGGGGCGCCTCCAC TTAGCAACCGGCGAC SCO0520 553277 - 553861 + | tetR family transcriptional regulator SCO0521 553892 - 554473 + | TetR family transcriptional regulator SCO0522 554649 - 555440 + | oxidoreductase SCO0523 555905 - 555468 - | transcriptional regulator SCO0524 555990 - 556898 + | gluconolactonase precursor SCO0525 557029 - 557844 + | hypothetical protein SCO0526 557882 - 558715 + | oxidoreductase TERM 111 558799 - 558745 - T 93 -22.9 -2.78384 | gap 1, opp_overlap 558780 558782 558783 TCCCGCGGGACGACA TGCCACAGGGCGGGGCCCCGGGAAAC TGGC GTTCCCCGCAGCCCCGCCCTGCG-CG GCGATCTCCCGATCA SCO0527 559015 - 558812 - | cold shock protein TERM 112 559123 - 559100 - H 85 -15.2 -3.83998 | GCATTGCACAGCAAA CCGCCCGCAC TCCT GGGCGGGCGG TCTGGGCGAACCACG SCO0528 559346 - 560098 + | lipoprotein SCO0529 561545 - 560127 - | oxidoreductase (secreted protein) SCO0530 562576 - 561731 - | transcriptional regulator SCO0531 562803 - 564071 + | sugar transporter sugar binding protein SCO0532 564141 - 565049 + | sugar transporter membrane protein SCO0533 565046 - 565903 + | sugar transporter membrane protein SCO0534 566007 - 567626 + | beta-hexosaminidase (secreted protein) SCO0535 567623 - 569044 + | hydrolase (secreted protein) TERM 113 569121 - 569070 - T 71 -15.6 -2.53271 | gap 1, overlap 569069 569067 GGACGGTCAGAACAG CGGCTCCTGACCGGGC-GCGGGCCG TCC CCGCCGGCTGCGCGGCCGGGTGCCG GGTGCCGGTGCCGTC SCO0536 569282 - 569061 - | hypothetical protein SCO0537 569655 - 570482 + | secreted protein SCO0538 570520 - 571848 + | sugar transporter sugar binding lipoprotein TERM 114 572338 - 572360 + G 79 -2.7 -4.82901 | gap 2, overlap 572318 572338 572339 ACTCGGTGCTGCACC GCC-T-CGGCG TCT CGTCGCAGGGC TTTTTGTCCGACCCC SCO0539 571863 - 572813 + | sugar transporter membrane protein SCO0540 572810 - 573709 + | sugar transport membrane protein SCO0541 573756 - 575081 + | alpha-galactosidase TERM 115 576686 - 576723 + G 72 -16.9 -2.87931 | gap 1 CGGTCGCCCACCGTG CCGCCGGCGGGGGCCGGG ACG CCCGGTGCCCGG-GGCGG TATGTCGGCGCTGGA SCO0542 575351 - 577984 + | regulatory protein SCO0543 578092 - 579228 + | peptidase SCO0544 579257 - 580789 + | hypothetical protein SCO0545 580913 - 583459 + | secreted protein SCO0546 586897 - 583523 - | pyruvate carboxylase SCO0547 587988 - 586987 - | acyltransferase SCO0548 589271 - 587985 - | 3-oxoacyl-(ACP) synthase TERM 116 588380 - 588438 + g 90 -20.9 -3.21099 | gap 1 CGCGCAGTGCGGCGT CGACGGCCGCCGCGCAGCCCGGACCGCC GGGC GCCGG-CTGGGCCACGTGGTGGCTGTCG TTGGTGATGCCCGCC SCO0549 589546 - 589268 - | acyl carrier protein SCO0550 590017 - 590895 + | hypothetical protein SCO0551 592309 - 590981 - | histidine kinase protein TERM 117 591069 - 591031 - G 100 -26 -2.90723 | opp_overlap 591032 CCAGCGCGAACGACA CCGTCACCCGCGCGCCGC CCA GCGGCGCGCGGGTGATCG TCAGTTCGCCGTCCG TERM 118 591032 - 591069 + g 100 -29.3 -2.53263 | gap 1, opp_overlap 591031 CAGCGCGAACGACAC CG-TCACCCGCGCGCCGC CCA GCGGCGCGCGGGTGATCG TCAGTTCGCCGTCCG SCO0552 593022 - 592306 - | response regulator SCO0553 593486 - 593049 - | hypothetical protein SCO0554 595338 - 593641 - | secreted beta-mannosidase SCO0555 597079 - 595484 - | membrane-bound oxidoreductase SCO0556 598655 - 597132 - | hypothetical protein SCO0558 599978 - 599712 - | hypothetical protein SCO0557 598747 - 599769 + | MerR family transcriptional regulator SCO0559 601052 - 600051 - | hypothetical protein SCO0560 603355 - 601133 - | catalase/peroxidase SCO0561 603840 - 603385 - | Fe regulatory protein SCO0562 603973 - 605085 + | integral membrane protein SCO0563 606555 - 605122 - | hypothetical protein SCO0564 607837 - 606677 - | hypothetical protein SCO0565 608909 - 607851 - | polyprenyl synthetase SCO0566 609186 - 608902 - | hypothetical protein SCO0567 609517 - 610356 + | insertion element transposase SCO0568 611488 - 610415 - | polyprenyl synthetase rpmJ 612106 - 611984 - | 50S ribosomal protein L36 TERM 119 612148 - 612180 + r 82 -19.2 -2.62184 | overlap 612128 CTCGGCACGTCTCGA CGTGCCGTTCAGCG TTCCT CGCGGAACGGCACG TGCTCTCCCGCCACC rpmG 612320 - 612156 - | 50S ribosomal protein L33 SCO0571 613754 - 612426 - | hypothetical protein TERM 120 612800 - 612834 + g 73 -14.9 -3.29471 | opp_overlap 612795 CGGGCAGGAAGCGGC CGTCGACGCGGGCCG TGGCC CGGCCCGGGATGACG TTGGTCTGGTAGCCC SCO0572 615151 - 613751 - | cytosine permease TERM 121 615109 - 615134 + g 74 -11.7 -3.8211 | overlap 615108 615119 CTCCCGTGGCCGCTT CCGCGGCGGCG GCCC CGCCGGCGGGG TTCTTGTGCATGGCC SCO0573 616107 - 615154 - | hypothetical protein SCO0574 616253 - 617086 + | IclR family regulatory protein SCO0575 617124 - 617855 + | peptidase E SCO0576 618788 - 617913 - | oxidoreductase SCO0577 619588 - 618788 - | hypothetical protein SCO0578 620367 - 619588 - | triosephosphate isomerase SCO0579 620879 - 620367 - | ribose 5-phosphate isomerase SCO0580 622672 - 620891 - | glycerone kinase TERM 122 621556 - 621612 + g 77 -18.5 -2.78384 | CCGAGGCGACGGGTA CGGCCGTGGTGCCGGAGGCGGCCGCGT CGG ACACGGCGGTGTCCTGGGCCGCGGCCG TGTCCTGGCCCGCGG TERM 123 622152 - 622107 - G 70 -16.7 -2.58544 | overlap 622106 GTGCAGCCGGAGAAG GCGATGCCGAAGGAGCGGGTG CGGA CGCCCGCCCGTTCGGCGACGC GCAGCACCTCCTCCA SCO0581 624036 - 622669 - | transporter protein SCO0582 624273 - 625034 + | transcriptional regulator SCO0583 625127 - 626350 + | cytochrome P450 SCO0584 627631 - 626369 - | cytochrome P450 SCO0585 628164 - 627628 - | ATP/GTP binding protein SCO0586 628588 - 628247 - | hypothetical protein SCO0587 629058 - 628600 - | hypothetical protein SCO0588 630912 - 629185 - | sensor kinase SCO0589 632103 - 631216 - | LysR family transcriptional regulator SCO0590 632180 - 633049 + | oxidoreductase SCO0591 633119 - 633958 + | lysozyme precursor SCO0592 634708 - 633986 - | hypothetical protein SCO0593 635706 - 634879 - | hypothetical protein SCO0594 636516 - 635776 - | methyltransferase SCO0595 636573 - 637166 + | hypothetical protein SCO0596 637261 - 637824 + | DNA-binding protein SCO0597 638306 - 637911 - | hypothetical protein SCO0598 638511 - 638804 + | anti anti sigma factor SCO0599 638801 - 639730 + | regulator of sig8 SCO0600 639859 - 640704 + | RNA polymerase sigma factor sig8 SCO0601 641762 - 640719 - | secreted protein SCO0602 642012 - 643133 + | hypothetical protein SCO0603 643179 - 643880 + | amino transferase SCO0604 645101 - 643926 - | hypothetical protein SCO0605 645297 - 646232 + | AraC family transcription regulator SCO0606 646345 - 647319 + | hypothetical protein SCO0607 647444 - 647731 + | lipoprotein TERM 124 648489 - 648468 - g 83 -15.1 -3.61398 | GCCCGCGGCGAAGAA GGCGGCGGC GCGG GCCACCGCC CAGCCCACCCTGGTG SCO0608 647887 - 648765 + | regulatory protein SCO0609 648876 - 649739 + | integral membrane protein SCO0610 649840 - 650610 + | GntR family transcriptional regulator SCO0611 650624 - 651388 + | hypothetical protein SCO0612 651462 - 651605 + | secreted protein SCO0613 651602 - 652864 + | arginine deiminase SCO0614 653165 - 652881 - | hypothetical protein SCO0615 653448 - 653906 + | secreted protein SCO0616 656322 - 653947 - | hypothetical protein TERM 125 655176 - 655192 + g 73 -9.3 -4.07568 | overlap 655150 GCCTGCCGATCGCGC GGGCCGC GGA GCGGGCC TTTTCGAGGCGGCGG SCO0617 658772 - 656319 - | putative phosphoketolase TERM 126 658933 - 658890 - H 100 -26 -3.40403 | GGTGCGTGACGAGAA CGGCACGGCCGTCACCGGCG CCGA CCCCGGTGTCGACCGTGCCG ACGCACCGGGTACCC TERM 127 659120 - 659071 - H 71 -15.1 -3.02829 | gap 1, opp_overlap 659069 659072, overlap 659108 659110 CACACCCTCTCAATA CCCCCCTGGGTATATCTGTTACGG TGG CCGGAAGAGATAC-CCCAGGGGGT AATTCCGGAAGGAGA TERM 128 659072 - 659119 + H 72 -16.4 -2.70932 | gap 1, opp_overlap 659071 659108 659110, overlap 659069 ACACCCTCTCAATAC CCCCCTGGGTATATCTGTTACGG TGG CCGGAAGAGATAC-CCCAGGGGG TAATTCCGGAAGGAG SCO0618 659143 - 660528 + | hypothetical protein TERM 129 660744 - 660795 + G 70 -16.4 -2.78816 | gap 1, overlap 660689 660741 GTGCGGTGGCGGGCC GGGCTGCTGTTCGCGGCCGCGGGTG TGC TGCCCGCCGCCGGGGCCGGC-GCCC TGTCCTCGCGGGTCC SCO0619 660525 - 661268 + | hypothetical protein SCO0620 661607 - 661329 - | hypothetical protein TERM 130 661679 - 661652 - H 80 -17.8 -2.9186 | gap 1, overlap 661643 ACCGAACCCCACATA CCCCCGCG-GGTA TCC TACCGCGCGGGGG GACGAACAACGAGAA SCO0621 661707 - 662291 + | hypothetical protein TERM 131 662304 - 662344 + F 100 -21.8 -4.24948 | overlap 662305 TGAGCCGCACCGACG ACGGCGGGCGCCGATCCC CTTCC GGGGTCGGCGCCCGCCAA TTTTGCATGTCATGC TERM 132 662305 - 662343 + F 100 -25.3 -3.14487 | overlap 662304 GAGCCGCACCGACGA CGGCGGGCGCCGATCCC CTTCC GGGGTCGGCGCCCGCCA ATTTTGCATGTCATG SCO0622 662373 - 663014 + | TetR family transcriptional regulator SCO0623 663067 - 664686 + | membrane transport protein TERM 133 664747 - 664703 - T 100 -35.1 -3.29144 | GCACCCCGTCGAGAA GACAGCGGGGCCGCCCGTCCG ATC CGGACGCGCGGCCCCGCTGCC GTGGGTGCGGCGGCC SCO0624 665773 - 664769 - | secreted protein SCO0625 667096 - 665816 - | transporter protein SCO0626 667744 - 667100 - | hypothetical protein SCO0627 669870 - 667741 - | ATP utilising protein SCO0628 671570 - 669972 - | secreted protein SCO0629 672727 - 671618 - | transcriptional regulator TERM 134 672661 - 672712 + g 76 -14.8 -3.33696 | overlap 672662 CCTGCCTCGGCCGGG CCCGCCGGCCGGCCGGCGCGGGGG CCCG CCCCGGCCTCGCCCGCCCTGCGGC TTCCTTCGCCACCAC TERM 135 672662 - 672711 + g 76 -18.3 -2.60075 | overlap 672661 CTGCCTCGGCCGGGC CCGCCGGCCGGCCGGCGCGGGGG CCCG CCCCGGCCTCGCCCGCCCTGCGG CTTCCTTCGCCACCA TERM 136 672786 - 672749 - R 100 -23.1 -3.53012 | TCTCCGTCGCGCAAA GCTTGTTAATGCGCATT ACCT AATGCGCATTAACAAGC AATGTGAAGGACCGC TERM 137 672832 - 672876 + r 85 -19.9 -2.53876 | opp_overlap 672834 672835 672836 GGGCTGCGCCGAGAA AAGGCCGCGTGGCGGCGGGAG AAG CTCCCACCGCCACGCGGAGTG TCGGTTCAGATACCG TERM 138 672874 - 672834 - R 100 -24.7 -4.36914 | opp_overlap 672832, overlap 672835 672836 GCTGCGCCGAGAAAA GGCCGCGTGGCGGCGGGAG AAG CTCCCACCGCCACGCGGAG TGTCGGTTCAGATAC TERM 139 672873 - 672835 - R 100 -28.2 -3.21934 | opp_overlap 672832, overlap 672834 672836 CTGCGCCGAGAAAAG GCCGCGTGGCGGCGGGAG AAG CTCCCACCGCCACGCGGA GTGTCGGTTCAGATA TERM 140 672872 - 672836 - R 100 -31.7 -2.52946 | opp_overlap 672832, overlap 672835 672834 TGCGCCGAGAAAAGG CCGCGTGGCGGCGGGAG AAG CTCCCACCGCCACGCGG AGTGTCGGTTCAGAT SCO0630 673403 - 672882 - | acetyltransferase TERM 141 673079 - 673125 + g 72 -14.3 -3.44051 | GCTCGCCGAGGCGCC CGGCAGCCGCGAGCGCGGCC-CG GAC CGCGGCCGCGCCGGCGCC-GCTG TTCTGGTGCTCGGGC TERM 142 673264 - 673301 + g 71 -15.5 -3.17763 | gap 1, opp_overlap 673252 AGACCCTCGATCCAC GCC-CCGGCGTCGGCGCG CAG CGCGTCGACGAGGGCGGC TTCCTCCGGTGTGGG SCO0631 673633 - 673451 - | hypothetical protein TERM 143 673681 - 673633 - G 89 -23.9 -2.62184 | gap 2, overlap 673660 CGGTTGCCGAGAGCA CCGCGGCTTCGCGCGGCCCGCGA CCAAT CCGCGGGCCGCGCG--GCCCCGG ATTACGCGGGGACGT SCO0632 673733 - 674317 + | RNA polymerase sigma factor SigK SCO0633 674317 - 675069 + | hypothetical protein TERM 144 675292 - 675266 - f 75 -17.2 -2.62184 | CCGGCGGGGAGACGA CGGACACCGCGG CGG CCGCGGGGCCCG CGTCGCAGGCGATCG SCO0635 676130 - 677023 + | hypothetical protein SCO0636 677227 - 678861 + | ABC transporter ATP-binding protein SCO0637 678937 - 679392 + | hypothetical protein SCO0638 680188 - 679529 - | lipoprotein SCO0639 681428 - 680496 - | integral membrane protein SCO0640 681863 - 681435 - | hypothetical protein SCO0641 681960 - 682535 + | tellurium resistance protein SCO0642 684345 - 682600 - | hypothetical protein SCO0643 685095 - 684409 - | secreted cellulose-binding protein TERM 145 685266 - 685231 - R 100 -24.1 -3.71527 | gap 1, overlap 685232 CCCGAATGAGCCAAA CGGCGGGTGGGCGGGG AACGG CCCCGCCCACCCGC-G CTCAGGCGGCTCCGG TERM 146 685266 - 685232 - R 95 -24.3 -2.82595 | overlap 685231 CCGAATGAGCCAAAC GGCGGGTGGGCGGGG AACGG CCCCGCCCACCCGCG CTCAGGCGGCTCCGG SCO0644 687444 - 685288 - | membrane protein TERM 147 687511 - 687482 - R 91 -17.1 -3.72893 | overlap 687483 687503 GACTCGGGCATGAAA TGCCCCCGGCTCC ATAC GGAACCGGGGGCC GGAGCGTTCACACGC TERM 148 687510 - 687483 - R 86 -20.6 -2.83522 | overlap 687482 687503 ACTCGGGCATGAAAT GCCCCCGGCTCC ATAC GGAACCGGGGGC CGGAGCGTTCACACG SCO0645 688567 - 687554 - | Zinc-containing dehydrogenase SCO0646 688679 - 689263 + | TetR family transcriptional regulator SCO0647 689364 - 690161 + | short chain oxidoreductase SCO0648 690228 - 690923 + | methyltransferase SCO0649 690966 - 691283 + | gas vesicle synthesis protein SCO0650 691320 - 691832 + | gas vesicle synthesis-like protein SCO0651 691829 - 692614 + | gas vesicle synthesis protein SCO0652 692619 - 692897 + | gas vesicle synthesis protein SCO0653 692894 - 693445 + | hypothetical protein SCO0654 693442 - 694416 + | hypothetical protein SCO0655 694441 - 694785 + | gas vesicle synthesis protein SCO0656 694782 - 695624 + | gas vesicle synthesis protein SCO0657 695660 - 695869 + | gas vesicle synthesis protein SCO0658 695866 - 696168 + | gas vesicle synthesis protein SCO0659 696248 - 697354 + | DeoR family transcriptional regulator TERM 149 697332 - 697365 + F 70 -4.6 -4.35361 | gap 1, overlap 697341 GTTCGACGGACCGGT CGGTCGAACCGCTCG ACGAA TGAGC-GTTTGAGCG TTTCATTTTCTTCTG SCO0660 697480 - 698811 + | solute-binding lipoprotein TERM 150 698957 - 698975 + G 72 -11.7 -3.63991 | opp_overlap 698937 TCAGCTGACCGCCGC CGGCGTC CTCAT GACGCCG TTCTTCGCCCTGCTG SCO0661 698838 - 699824 + | binding protein dependent transport protein SCO0662 699821 - 700684 + | binding protein dependent transport protein SCO0663 700681 - 701712 + | 2-hydroxyacid dehydrogenase SCO0664 701709 - 703604 + | hypothetical protein SCO0665 703750 - 703977 + | secreted protein SCO0666 704114 - 706393 + | catalase TERM 151 706403 - 706442 + T 100 -31.5 -3.06696 | GGCTGATCCACCGGG CCGTGGGGCCGGGCGCC GACCTG GGCGCCCGGCCCCGCGG TGTGTTCAGCACAGG SCO0667 707329 - 706448 - | secreted protein SCO0668 708993 - 707401 - | flavoprotein SCO0669 709071 - 709688 + | TetR family transcriptional regulator SCO0670 709685 - 711268 + | glycerol-3-phosphate dehydrogenase SCO0671 711633 - 711379 - | hypothetical protein TERM 152 711693 - 711726 + G 73 -18.1 -2.53876 | gap 1, opp_overlap 711684 711685 GAGGAACGCCGTCGC GCGCGCCGAGCCCGGC GGG GCCGGGTCCGGC-CGC TGCGTTCCGGTCCGC SCO0672 711649 - 712200 + | anti-sigma factor antagonist SCO0673 712736 - 712209 - | hypothetical protein SCO0674 714181 - 712829 - | secreted endo-1,4-beta-xylanase TERM 153 714529 - 714580 + G 79 -18.6 -2.90763 | gap 1, overlap 714531 GACGGCGCTGCTGGT CGACGCGTCCACCCGGGCGGTCGGC GCG GCCGGCGGCC-GGGTGGGCGGGGTG TATCTGCGCTCTGCC TERM 154 714531 - 714578 + G 77 -17.6 -3.00498 | gap 1, overlap 714529 CGGCGCTGCTGGTCG ACGCGTCCACCCGGGCGGTCGGC GCG GCCGGCGGCC-GGGTGGGCGGGG TGTATCTGCGCTCTG SCO0675 714374 - 717028 + | hypothetical protein SCO0676 717303 - 719897 + | integral membrane sensor protein SCO0677 720032 - 720874 + | secreted chitosanase TERM 155 720925 - 720977 + T 79 -17 -3.1355 | gap 1, overlap 720974 GGGCAGGACGCGGGC CGCGGAACCGGCCGTACGCCAGGTT CCGC GGCCCG-TGTGCCGCCGGTTCCGCG TTCCGTGTCAGTGCC SCO0678 721158 - 720985 - | hypothetical protein SCO0679 721248 - 721463 + | hypothetical protein SCO0680 723039 - 721495 - | transmembrane efflux protein SCO0681 723181 - 724545 + | ferredoxin/ferredoxin-NADP reductase (putative secreted protein) TERM 156 724553 - 724597 + T 95 -25.8 -2.87564 | gap 1 GCGCCTGAGCCACCA CGTCCGGCGCCGGTGACCTCC TCGC GGAGGT-GCCGGCGCCGGTCG TGTGTGCGCCGGTCC SCO0682 725013 - 724639 - | hypothetical protein SCO0683 725580 - 725056 - | hypothetical protein SCO0684 726395 - 725619 - | hypothetical protein SCO0685 726808 - 726401 - | hypothetical protein SCO0686 726845 - 728068 + | hypothetical protein SCO0687 728924 - 728130 - | oxidoreductase SCO0688 729117 - 730289 + | hypothetical protein SCO0689 730352 - 730987 + | oxidoreductase, iron-sulphur binding subunit SCO0690 730984 - 731976 + | oxidoreductase, molybdopterin binding subunit SCO0691 732005 - 734134 + | oxidoreductase SCO0692 735667 - 734210 - | membrane protein SCO0693 735845 - 736192 + | membrane protein SCO0694 736312 - 736503 + | hypothetical protein SCO0695 736520 - 737506 + | hypothetical protein SCO0696 738340 - 737846 - | integral membrane protein SCO0698 739875 - 739510 - | hypothetical protein SCO0699 740231 - 739938 - | hypothetical protein SCO0700 742083 - 740314 - | ABC transporter protein ATP-binding protein SCO0701 742685 - 742242 - | hypothetical protein SCO0702 743394 - 742816 - | regulator TERM 157 743450 - 743421 - H 73 -13.5 -3.33162 | opp_overlap 743420 743419 743416 GATGCGACGTCAGAA CGGGGCGTCGACC GGGG GGTTGACGCCACG GCTATTATCCACGCT SCO0703 743575 - 743802 + | regulator TERM 158 744860 - 744900 + T 100 -38.5 -2.65264 | overlap 744854 744875 TAGCGGCACGGACGA CGGAGGAGGGGCCACGCGC GGC GCGCGTGGCCCCTCCTCCG TCGTGTCCGTCGTGC SCO0705 745763 - 744945 - | hypothetical protein SCO0706 747194 - 745911 - | lipoprotein SCO0707 748387 - 747191 - | branched-chain amino acid ABC transport permease SCO0708 749279 - 748380 - | branched-chain amino acid ABC transport protein SCO0709 750076 - 749276 - | branched-chain amino acid transport ATP-binding protein SCO0710 750864 - 750073 - | branched-chain amino acid transport ATP-binding protein SCO0711 753197 - 751917 - | hypothetical protein SCO0712 756143 - 753318 - | transcriptional activator SCO0713 757246 - 756314 - | lipase (secreted protein) SCO0714 757637 - 758524 + | oxidoreductase SCO0715 758902 - 758531 - | hypothetical protein SCO0716 759197 - 760399 + | glycosyl hydrolase (secreted protein) SCO0717 760471 - 761598 + | integral membrane protein SCO0718 761675 - 761896 + | hypothetical protein SCO0719 762485 - 762009 - | hypothetical protein SCO0720 764051 - 762558 - | integral membrane protein TERM 159 763526 - 763485 - G 70 -14.3 -3.21416 | gap 1, overlap 763511 CAGCGCCATCAGCAA CGCCCCGGCCGCCACCCCGC ACA GCACGGCC-CGGCCGGAGCG CCCCCGCCCGGCTCG SCO0721 766594 - 764216 - | glycosyl transferase SCO0722 767331 - 766591 - | hydrolase frcK 767385 - 768074 + | putative fructose transport system kinase TERM 160 768213 - 768252 + F 75 -12.8 -3.65812 | gap 1, overlap 768207 GCGCTCGCGCCGGCG CCGGCCG-AGAACGTCGTC GGT GGTGTCGGTCTTCGGCCGG TTCTCTTCCGGGACG SCO0724 768426 - 769367 + | transcriptional regulator SCO0725 769688 - 770065 + | hypothetical protein SCO0726 770632 - 770144 - | oxidoreductase SCO0727 771588 - 770665 - | hypothetical protein SCO0728 771628 - 772362 + | regulatory protein SCO0729 772544 - 772966 + | hypothetical protein SCO0730 773435 - 772974 - | hypothetical protein SCO0731 774613 - 773432 - | transferase SCO0732 774765 - 776129 + | secreted protease SCO0733 776388 - 776203 - | hypothetical protein SCO0734 777828 - 776554 - | transcriptional repressor SCO0735 777895 - 779097 + | oxidoreductase SCO0736 779826 - 779131 - | secreted protein SCO0737 780812 - 780012 - | oxidoreductase SCO0738 780863 - 781402 + | secreted protein SCO0739 782312 - 781386 - | short chain dehydrogenase SCO0740 783096 - 782467 - | hydrolase SCO0741 784184 - 783096 - | oxidoreductase SCO0742 784362 - 786116 + | ABC transporter SCO0743 786409 - 786125 - | secreted protein SCO0744 786591 - 786956 + | hypothetical protein SCO0745 787643 - 786984 - | TetR family transcriptional regulator TERM 161 787164 - 787122 - G 78 -17.6 -3.14344 | GACGCCGCCGATGAA CGCGGTGGCGGCGAGCCG GTGGTCA CGGGTCGCCGCCTCCCCG CGTACGGCGGCCGAC SCO0746 787843 - 789096 + | serine/threonine protein kinase (putative secreted protein) TERM 162 789287 - 789246 - T 82 -14.3 -3.80733 | gap 1 CGCACTCCAGAAGAA GC-GCCCGGGCCGCTTCCCG CGA CACGGAGCGGCCCGGTCCGC ACCGGGCGGCGCCCT SCO0747 789837 - 789337 - | hypothetical protein SCO0748 789960 - 790541 + | hydrolase SCO0749 791535 - 790561 - | dehydratase SCO0750 791880 - 791701 - | hypothetical protein SCO0751 794467 - 791981 - | regulatory protein SCO0752 796002 - 794689 - | protease precursor TERM 163 796506 - 796492 - H 82 -12.8 -4.07885 | opp_overlap 796499 796502 GAGGGCTCCGGAAAA GGGCGC CCG GCGCCC GCGGTCGCGGCCGTC SCO0753 796584 - 796799 + | hypothetical protein TERM 164 796820 - 796846 + F 100 -19.5 -4.12198 | CCCTTGCGTCGCTGA GTCCCGGAGCC GTCCA GGCTCCGGGAC TTTTCGGCCGTTCTC SCO0754 796977 - 797723 + | secreted protein SCO0755 797720 - 799942 + | ABC transporter TERM 165 801054 - 801089 + G 79 -14.1 -3.58726 | gap 2 TTCTACCGCCCGCTG CCGGAGCGGCGGCCGAG TCCG CTCGG--GCTGCTCCGG TTCTGTCTGGCGGGC SCO0756 799944 - 802766 + | ABC transporter SCO0757 802797 - 803807 + | phosphatase SCO0758 803856 - 804035 + | hypothetical protein TERM 166 804114 - 804161 + G 71 -10.5 -3.72576 | opp_overlap 804117, overlap 804115 CGACCGCGAAGGACC ACAGCTGCCGACGGCC-CGGGGA CCGG TCTCCGAGGCCGTCGGC-GCACA TTTGCTCGGCACCGG TERM 167 804158 - 804117 - g 79 -18.8 -2.86164 | opp_overlap 804115 804114 CCGCGAAGGACCACA GCTGCCGACGGCC-CGGGGA CCGG TCTCCGAGGCCGTCGGC-GC ACATTTGCTCGGCAC SCO0759 804091 - 805122 + | hypothetical protein SCO0760 805135 - 805797 + | methyltransferase SCO0761 805859 - 806038 + | hypothetical protein TERM 168 806075 - 806049 - T 83 -16.6 -3.33261 | CCTGAACCGGGAGAA CGGCGGACGG CCCCACT CCGTCCGCCG TCCCCGGTGCGGGCC SCO0762 806606 - 806172 - | protease inhibitor protein SCO0763 806966 - 808135 + | oxidoreductase SCO0764 809813 - 808206 - | hydrolase SCO0765 812415 - 810172 - | secreted endoglucanase SCO0766 815655 - 812569 - | secreted beta-galactosidase SCO0767 815808 - 818315 + | hypothetical protein SCO0768 818446 - 819111 + | lipoprotein SCO0769 820116 - 819148 - | aldo/keto reductase SCO0770 820751 - 820194 - | hypothetical protein SCO0771 821198 - 820761 - | hypothetical protein TERM 169 821714 - 821739 + G 78 -17.6 -3.17051 | overlap 821712 GGCGGCCGGCGCGGG GCTGCCCGCC GCGCTG GGCGGGCAGC TGTTCCTGCTGGCGG SCO0772 821295 - 821873 + | regulatory protein SCO0773 822048 - 821848 - | ferredoxin SCO0774 823299 - 822061 - | cytochrome P450 TERM 170 824034 - 824007 - g 71 -9.2 -3.85864 | gap 1, opp_overlap 824012 824014, overlap 824004 CGACTACCAGAAGAA GACGGA-ACGGGA GAT TCCCGTCTTCGTC CTGGAGCCGTCCCAC SCO0775 823609 - 824058 + | hypothetical protein TERM 171 824127 - 824157 + T 77 -14.7 -3.53811 | opp_overlap 824117, overlap 824125 GAACACGTCGTTCAG GCCCCGCCGTG TTCCCCCGT CGCGGCGGGGC TTTCCGCCGCCTCCC SCO0776 825139 - 824123 - | integral membrane protein SCO0777 825287 - 826312 + | hypothetical protein TERM 172 826402 - 826384 - g 88 -3.8 -5.07486 | GACGGCGAAGAAAAA GAAGAAGA AGC TCCCCCTC GCGTACAAGCCCGTC SCO0778 826361 - 826669 + | integral membrane protein SCO0779 827085 - 826690 - | hypothetical protein SCO0780 827277 - 828218 + | zinc-binding oxidoreductase SCO0781 828289 - 828789 + | anti sigma factor antagonist SCO0782 829708 - 828755 - | ribose-phosphate pyrophosphokinase TERM 173 828801 - 828856 + g 76 -12.4 -3.95787 | overlap 828802 CTGACCGACTCGCCG TTGTGGATGCGGCGCACCGCCTCGGC GAGC GCCGGGGCGATGGACAGGATCCGCAG TTTGTCCGTGTGGTC SCO0783 829910 - 831817 + | tetracycline resistance protein SCO0784 831835 - 832518 + | secreted protein SCO0785 833198 - 832515 - | integral membrane protein TERM 174 833335 - 833390 + G 71 -15.5 -3.17229 | gap 3, overlap 833339 GGACGGCGACCGACC CGAACG-GCACACCCTCGCC--CTGCCG TTG CGGCTGCTGGCGACGGCGTGCGCGTTCG TCTTCATGGTGGCGT SCO0786 833261 - 833800 + | integral membrane protein SCO0787 833931 - 835199 + | secreted hydrolase SCO0788 835474 - 835238 - | hypothetical protein TERM 175 836458 - 836422 - g 70 -13.7 -3.25823 | gap 1, opp_overlap 836445 836448 836450 GGCCGTGGAGATCAA CAGCCGCCCGGAGCGG CTCGAC CCGCCGCGG-CGGCTG CTGCGCCGTGCGGTG SCO0789 835547 - 836665 + | hypothetical protein SCO0790 836721 - 837377 + | hydrolase SCO0791 837541 - 838680 + | integral membrane protein TERM 176 838867 - 838900 + F 77 -14.6 -3.52652 | overlap 838896 TACTCACCTCGTACC GCCCCGATCGTGAT TCCCCC GTCGCGGTCGGGGC TTCTCCTTGCGTGCC SCO0792 838977 - 840008 + | hypothetical protein SCO0793 840334 - 840026 - | hypothetical protein SCO0794 841688 - 840399 - | transcriptional regulator SCO0795 841878 - 842372 + | hypothetical protein SCO0796 842488 - 843747 + | integral membrane protein SCO0797 843808 - 844860 + | integral membrane protein SCO0798 844881 - 846116 + | secreted protein SCO0799 846809 - 846084 - | hypothetical protein SCO0800 847534 - 846917 - | TetR family transcriptional regulator TERM 177 847487 - 847439 - G 73 -15.2 -3.28712 | gap 1, overlap 847464 GGGGCTCTCCGAGAA CAGC-CGCGCGCCCACCGAGAGC AACT GCTCCCGGCGCTCGCCCGTGCTG AGCCGGCGGCGGATG SCO0801 847649 - 849232 + | cytochrome P450 SCO0802 850042 - 849194 - | hypothetical protein SCO0803 851074 - 850100 - | RNA polymerase sigma factor SCO0804 851840 - 851097 - | hypothetical protein SCO0805 853212 - 851911 - | prolyl aminopeptidase SCO0806 854365 - 853340 - | LacI family transcriptional regulator SCO0807 854775 - 854455 - | hypothetical protein SCO0808 855884 - 854802 - | secreted solute-binding lipoprotein SCO0809 857139 - 856126 - | ABC transporter permease SCO0810 858172 - 857132 - | ABC transporter permease SCO0811 859686 - 858169 - | ABC transporter ATP-binding protein TERM 178 859823 - 859807 - H 83 -5.1 -4.8048 | overlap 859809 TTCCGAGACCAAAAA CTTTCGA TAG TCGAAGG TCACGACCGAGTCAC SCO0812 859963 - 861123 + | sugar isomerase SCO0813 861242 - 863281 + | short chain dehydrogenase SCO0814 863278 - 864732 + | rhamnose kinase SCO0815 864811 - 865563 + | hypothetical protein SCO0816 865560 - 867038 + | iron-sulfur protein SCO0817 867035 - 867682 + | hypothetical protein SCO0818 867800 - 868594 + | ABC transporter ATP-binding protein SCO0819 868598 - 869908 + | transmembrane transport protein SCO0820 870337 - 869978 - | hypothetical protein SCO0821 871397 - 870420 - | threonine dehydratase SCO0822 872086 - 871406 - | DNA-binding protein SCO0823 872193 - 872633 + | GntR family transcriptional regulator SCO0824 872630 - 873520 + | ABC transporter ATP-binding protein SCO0825 873517 - 874473 + | transmembrane transport protein SCO0826 874543 - 875343 + | hypothetical protein SCO0827 875726 - 875388 - | hypothetical protein TERM 179 875766 - 875780 + H 77 -4.9 -4.614 | overlap 875762 TCACTCCGCAAGCCC TGCCC GTTCA GGGCG TTTTGTCTGCTTAAC SCO0828 875839 - 877500 + | alkaline phosphatase SCO0829 877702 - 879078 + | serine protease SCO0830 880219 - 879140 - | penicillin-binding protein SCO0831 881136 - 880216 - | hypothetical protein TERM 180 880529 - 880548 + g 70 -16.4 -2.57344 | overlap 880528 AGGTAGTCGGCGACG CCGGGCGG CAGA CCGCCCGG GTTCTCGCCCCAGTC SCO0832 882098 - 881133 - | hypothetical protein SCO0833 882805 - 882095 - | hypothetical protein SCO0834 883014 - 882826 - | hypothetical protein SCO0835 883760 - 883113 - | methyltransferase SCO0836 884921 - 883920 - | hypothetical protein SCO0837 885270 - 885004 - | hypothetical protein TERM 181 885347 - 885298 - H 79 -16.4 -3.28712 | gap 2, overlap 885324 885325 CGGCGCGCCGGAGAA CCTG-CGGGTCGGCG-CGCGCCGG AGAA CCGGCGGGTCGGCGAACCGGCAGG CCGCCCCGCCGCACG SCO0838 885442 - 885867 + | hypothetical protein SCO0839 888050 - 885933 - | transmembrane transport protein SCO0840 888700 - 888194 - | MarR family transcriptional regulator SCO0841 888805 - 890367 + | oxidoreductase SCO0842 890835 - 892211 + | deoxyribodipyrimidine photolyase SCO0843 892672 - 892238 - | hypothetical protein SCO0844 893006 - 892665 - | DNA-binding protein SCO0845 893279 - 893013 - | hypothetical protein SCO0846 893386 - 894186 + | hypothetical protein SCO0847 894702 - 894244 - | lyase TERM 182 894460 - 894495 + g 73 -11 -3.86897 | overlap 894473 894474 GAAGCTCGTGGCCGT CCCGGGGTCGTCCGGC GGGC GCAGGGTGACGTCGGG TTTGTCCGGCGTCGG TERM 183 894733 - 894743 + r 77 -4.6 -4.70659 | CTCTTGTCACGGGTT TCGG GTT CCGG TTTTTCGGTGTCGGG SCO0848 895819 - 894818 - | oxidoreductase SCO0849 896353 - 895829 - | membrane protein SCO0850 896543 - 896968 + | membrane protein SCO0851 898037 - 896973 - | PfkB-family carbohydrate kinase SCO0852 898666 - 898034 - | aldolase SCO0853 898895 - 899293 + | membrane protein SCO0854 899538 - 902129 + | hypothetical protein SCO0855 902680 - 902174 - | acetyltransferase SCO0856 903969 - 902743 - | integral membrane protein SCO0857 904109 - 904747 + | TetR family transcriptional regulator SCO0858 905377 - 905000 - | hypothetical protein SCO0859 906055 - 905546 - | membrane protein SCO0860 908340 - 906052 - | cation-transporting ATPase SCO0861 908549 - 908340 - | secreted protein SCO0862 909472 - 908813 - | integral membrane protein SCO0863 910926 - 909469 - | integral membrane protein TERM 184 911312 - 911294 - R 70 -10.2 -3.76373 | overlap 911299 CCGGCAAGATCCAAA CGACACCC TCA GGGCGCCG GGCATCGGCCGGAAG SCO0864 911939 - 911343 - | ECF family RNA polymerase sigma factor SCO0865 912862 - 912092 - | integral-membrane protein TERM 185 912252 - 912273 + g 77 -17.3 -3.01712 | opp_overlap 912249 912248 AACGGCACGAACGCG CGGTCCGCG CAGG CGCGGACCG TCTTGAAGAGCGCGC SCO0866 913572 - 912931 - | ECF family RNA polymerase sigma factor SCO0867 914472 - 913768 - | integral-membrane protein SCO0868 915270 - 914827 - | regulatory protein SCO0869 915715 - 915341 - | anti-sigma factor antagonist TERM 186 915848 - 915899 + r 87 -15.9 -3.66999 | gap 3, opp_overlap 915829 GGTTCTTCACGGCTG CGCCGGCGGACGGGGGGCGCGTGCCG CTG CGGCGTG-GCCCTGC-TC-GCCGGCG TTTCCCTCGGTCGGT SCO0870 916785 - 916336 - | two-component system response regulator SCO0871 918377 - 916782 - | two-component sensor protein TERM 187 917868 - 917925 + g 83 -15 -3.62046 | gap 3, overlap 917865 917860 917868 CTTGCCGTCCGCCAC GGCC-TCGGCGAGGTCCGCG-T-TCTGGG TCT CCCAGGCGTCGCGGATCTCGTCGAAGACC TTCTTCCCCCGCTCC SCO0872 919775 - 918438 - | hypothetical protein SCO0873 920182 - 919901 - | hypothetical protein SCO0874 921419 - 920727 - | integral membrane protein SCO0875 921755 - 921420 - | transcription regulator ArsR SCO0876 922175 - 921927 - | hypothetical protein SCO0877 922247 - 924913 + | transcriptional regulatory protein SCO0878 924917 - 925795 + | hydrolase SCO0880 926916 - 927332 + | membrane protein SCO0881 928499 - 927534 - | hypothetical protein SCO0882 928670 - 929017 + | hypothetical protein def 929061 - 929717 + | peptide deformylase TERM 188 929727 - 929782 + T 70 -12.4 -3.31461 | gap 1 GCCTGACCGCCCGCC CGGACGGGCCGGC-GACTCCGCTCG CCGGGTC CGGGCCGGGCCGGCCGGACCGTCAG TTGTCCCGGTAGGTC SCO0884 931212 - 929779 - | oxidoreductase SCO0885 931333 - 931737 + | thioredoxin SCO0886 932791 - 931757 - | LacI family transcriptional regulator TERM 189 932041 - 932077 + g 84 -19.4 -3.21099 | gap 1, opp_overlap 932026 CCGCGTCGAGCCCCA GGGGGCGCCAGCGCGCC GCGA GGCGGGC-GGCGTCCCC TTCGTCGTAGGCGAG TERM 190 932834 - 932814 - R 70 -12.5 -3.29511 | GGCATCCTGGCAGAA GCCGGACGG GAG CCGTCGGGC GGGGCAACGCCGTCC SCO0887 933568 - 932864 - | TetR family transcriptional regulator TERM 191 933597 - 933649 + H 79 -14.3 -3.62224 | opp_overlap 933598 933634, overlap 933598 AGCATCGGGAAGAGA ACTGGACCGCGGTCCGTTTAA GATGCTAGAAA TTAAACGGACCCCGGTCCGGA TTGTTACCGCAGTGT TERM 192 933598 - 933648 + H 79 -17.8 -2.77013 | opp_overlap 933598 933634, overlap 933597 GCATCGGGAAGAGAA CTGGACCGCGGTCCGTTTAA GATGCTAGAAA TTAAACGGACCCCGGTCCGG ATTGTTACCGCAGTG TERM 193 933648 - 933598 - H 87 -15.6 -3.66784 | opp_overlap 933598 933597, overlap 933634 GCATCGGGAAGAGAA CTGGACCGCGGTCCGTTTAA GATGCTAGAAA TTAAACGGACCCCGGTCCGG ATTGTTACCGCAGTG SCO0888 933708 - 934271 + | secreted protein TERM 194 934329 - 934286 - T 71 -16.1 -2.62263 | gap 2, opp_overlap 934289 ACCGGCGCGAGAGCA CGTCGTACGGGACCGGAGCTC GGCC GAGCTCCGGTCCCGC-CGT-G TGTCAGGCCACCGCC TERM 195 934289 - 934327 + T 90 -21.1 -2.87132 | gap 1, opp_overlap 934286 GGCGCGAGAGCACGT CGTACGGGACCGGAGCTC GGCC GAGCTCCGGTCCCGC-CG TGTGTCAGGCCACCG SCO0889 935237 - 934332 - | LysR family transcriptional regulator SCO0890 936329 - 935622 - | short chain oxidoreductase TERM 196 936359 - 936416 + H 100 -25.7 -3.08679 | gap 1, overlap 936352 936360 GCGTGCGGGGGCGGG CAGCCAGGCGTCCGGTCTTCCTGGGACC ACG GGTACCAGGAAGACCGGACGTCCG-CGG TGTTCACTGGGGGCA TERM 197 936360 - 936418 + H 87 -19.7 -3.05596 | gap 2, overlap 936352 936359 CGTGCGGGGGCGGGC AGCC-AGG-CGTCCGGTCTTCCTGGGACC ACG GGTACCAGGAAGACCGGACGTCCGCGGTG TTCACTGGGGGCATG SCO0891 936431 - 937270 + | DNA-binding protein SCO0892 938240 - 937290 - | integral membrane protein SCO0893 938389 - 939612 + | hypothetical protein SCO0894 939627 - 941063 + | membrane protein SCO0895 942090 - 941071 - | RNA polymerase principal sigma factor HrdC SCO0896 942878 - 942453 - | oxidoreductase SCO0897 943567 - 942974 - | hypothetical protein TERM 198 943318 - 943268 - G 84 -18.3 -3.28924 | overlap 943247 943269 GACCGCCTGGGAGAA GGCGCCCACG-GCGGTCACCTGGGA GGC CCCCAGG-GACCGCTCGCGGGCGAA GGCGGTCAGCTCGGC TERM 199 943317 - 943269 - G 86 -21.8 -2.57211 | overlap 943247 943268 ACCGCCTGGGAGAAG GCGCCCACG-GCGGTCACCTGGGA GGC CCCCAGG-GACCGCTCGCGGGCGA AGGCGGTCAGCTCGG SCO0898 945833 - 943851 - | regulator TERM 200 945907 - 945961 + H 93 -23.4 -2.58767 | overlap 945908 945921 CGGGCCGGTACCCGG CCGGTCGCCGGCCGGCTGCCGGTCGG TCG CCGGTCGGTCGCCGGCCGGCTGCTGA TCCGTTGCTGATTGG TERM 201 945908 - 945965 + H 80 -16.9 -3.27298 | gap 1, overlap 945907 945921 GGGCCGGTACCCGGC CGG-TCGCCGGCCGGCTGCCGGTCGGTC GCC GGTCGGTCGCCGGCCGGCTGCTGATCCG TTGCTGATTGGGGCG TERM 202 946132 - 946173 + G 71 -13 -3.53091 | gap 1, opp_overlap 946097 GTCGGCCTGCACGTG GCCGT-CGGCGGCACGGGC AGCCC GGTCGTGCTGCTGCACGGC TTTCCCCAGACCCAT SCO0899 946045 - 946941 + | hydrolase SCO0900 947027 - 948310 + | transmembrane efflux protein SCO0901 949762 - 948674 - | hypothetical protein SCO0902 950292 - 949864 - | hypothetical protein SCO0903 950551 - 950811 + | hypothetical protein TERM 203 950858 - 950885 + G 75 -13.4 -3.63991 | gap 1 CGAGGAGCTGGGGGT CCTGGTCGGCGCC GTG GGCGC-GGCCGGG TTCTTCGGCCTGATG SCO0904 950823 - 951122 + | secreted protein TERM 204 951224 - 951196 - Tf 71 -15.3 -3.07344 | CCACGGCGGAACACA CCCGACACCCGAC ATC GCCAGATGTCGGG GGGTGATCACCTCGC SCO0906 951949 - 951452 - | hypothetical protein SCO0905 951217 - 951522 + | membrane protein SCO0907 952858 - 951968 - | dehydrogenase SCO0908 952991 - 953455 + | hypothetical protein SCO0909 954429 - 953440 - | hypothetical protein SCO0910 954566 - 955867 + | hypothetical protein SCO0911 955864 - 957204 + | hypothetical protein SCO0912 957204 - 958019 + | hypothetical protein SCO0913 958016 - 958987 + | hypothetical protein SCO0914 960292 - 959024 - | lipoprotein SCO0915 960501 - 960758 + | hypothetical protein SCO0916 961283 - 960792 - | hypothetical protein SCO0917 961534 - 962553 + | oxygenase SCO0918 962596 - 964941 + | excinuclease ABC subunit A SCO0919 965943 - 964984 - | hypothetical protein SCO0920 966843 - 966016 - | acyltransferase SCO0921 967613 - 966843 - | hypothetical protein TERM 205 967786 - 967744 - R 87 -16.3 -3.64822 | gap 2, opp_overlap 967780, overlap 967745 967748 ATGCCGGGAGCGAAA GCGAGACGGGGCCGGGGGGAG CAC CTCCCCC-GACCCCGCC-CGT CCGCACTGTGCCGGC TERM 206 967785 - 967745 - R 86 -19.8 -2.78679 | gap 2, opp_overlap 967780, overlap 967744 967748 TGCCGGGAGCGAAAG CGAGACGGGGCCGGGGGGAG CAC CTCCCCC-GACCCCGCC-CG TCCGCACTGTGCCGG TERM 207 967783 - 967748 - R 88 -21.2 -2.66272 | gap 1, opp_overlap 967780, overlap 967745 967744 CGGGAGCGAAAGCGA GACGGGGCCGGGGGGAG CAC CTCCCCC-GACCCCGCC CGTCCGCACTGTGCC SCO0922 968641 - 967895 - | succinate dehydrogenase/fumarate reductase iron-sulfur subunit sdhA 970587 - 968638 - | succinate dehydrogenase flavoprotein subunit SCO0924 971320 - 970589 - | cytochrome B subunit SCO0925 971392 - 972276 + | LysR family transcriptional regulator SCO0926 973210 - 972311 - | hypothetical protein SCO0927 973388 - 974224 + | LysR family transcriptional regulator SCO0928 976456 - 974312 - | hypothetical protein SCO0929 977265 - 976453 - | hypothetical protein TERM 208 977455 - 977415 - R 86 -19 -3.2048 | overlap 977406 977416 GCCAAAGCGCACGAA CGGGACCGTCCCCTCCGC TGGGC ACGGAGGGGACGGTCCAC TGGCCGGACGCCGAA TERM 209 977454 - 977416 - R 89 -22.5 -2.51966 | overlap 977415 977406 CCAAAGCGCACGAAC GGGACCGTCCCCTCCGC TGGGC ACGGAGGGGACGGTCCA CTGGCCGGACGCCGA SCO0930 978444 - 977491 - | lipoprotein TERM 210 978536 - 978546 + H 74 -2.4 -4.65916 | GCCCGTTGTGTTCAA CCGG TCG CGGG TTTTCTTCCGGTCCG SCO0931 978713 - 979324 + | secreted proline-rich protein SCO0932 979340 - 980104 + | integral membrane protein TERM 211 980173 - 980134 - f 84 -19.3 -2.87026 | overlap 980121 GACACCGACACGACA GCGGGGACGGTGACGGC CGACAC GCCGTCACCGTCCCCTG AGCGGCCCACACTCT SCO0933 980316 - 980834 + | lipoprotein SCO0934 981558 - 980917 - | integral membrane protein SCO0935 981742 - 982407 + | secreted protein SCO0936 983044 - 982439 - | oligosaccharide deacetylase SCO0937 983389 - 983850 + | hypothetical protein SCO0938 983971 - 985377 + | amino acid transporter protein SCO0939 986237 - 985374 - | hydrolase SCO0940 986247 - 986720 + | MarR family regulatory protein SCO0941 987876 - 986722 - | lipoprotein SCO0942 988130 - 988684 + | RNA polymerase sigma factor SigL SCO0943 988826 - 989341 + | hypothetical protein SCO0944 989560 - 990210 + | hypothetical protein SCO0945 991112 - 990249 - | formamidopyrimidine-DNA glycosylase SCO0946 993243 - 991153 - | regulatory protein SCO0947 993366 - 994778 + | integral membrane protein SCO0948 997821 - 994798 - | alpha-mannosidase SCO0949 999210 - 997963 - | hypothetical protein SCO0950 1000162 - 999242 - | transport system permease protein TERM 212 1000118 - 1000145 + g 77 -17 -3.30441 | gap 1 GCGTTCCCGGTCGGC GGCCCGGGTCCGC TCG GCGG-CCCGGGTC TTCTCGGCGGTGCTC SCO0951 1001091 - 1000159 - | transport system permease protein SCO0952 1002390 - 1001098 - | solute-binding protein SCO0953 1002624 - 1003673 + | LacI family transcriptional regulator SCO0954 1004478 - 1003996 - | acetyltransferase SCO0955 1004710 - 1004534 - | hypothetical protein TERM 213 1004633 - 1004665 + g 72 -14 -3.33708 | overlap 1004637 GTCGAGGCTGCCGAG CTCGCCGGGCCGGC GGCCG GCCCGCCCGGTGCG TTCCTCTGTGCGTTG SCO0956 1005186 - 1005641 + | hpothetical protein SCM1111 SCO0957 1007202 - 1005700 - | oxidoreductase TERM 214 1007248 - 1007266 + r 85 -8.8 -4.63218 | opp_overlap 1007262, overlap 1007249 GCGCTCCGGGAGGCG ACCGCTGT CGA ACAGCGGA TTTTATTCAGCGCGC SCO0958 1008646 - 1007306 - | hypothetical protein TERM 215 1007629 - 1007666 + g 75 -13.3 -3.65522 | gap 1 CGTGGTCGGCGAGCA GGGCGACGGCTCCGG-CG CCG CGTCCGGGCCCGGCGTCC TTGTTGCGGTCCATG TERM 216 1008771 - 1008798 + r 78 -18.5 -2.65264 | opp_overlap 1008771 AACAAGAGATTAAAA GTCCCGCCCCT TTCGAC AGGGGCGGGAC TGCTGTGACTCATGG TERM 217 1008798 - 1008771 - R 100 -18.5 -4.45723 | opp_overlap 1008771 AACAAGAGATTAAAA GTCCCGCCCCT TTCGAC AGGGGCGGGAC TGCTGTGACTCATGG SCO0959 1011153 - 1008835 - | secreted protein TERM 218 1009800 - 1009855 + g 74 -12.3 -3.71848 | overlap 1009822 1009842 CGTCGGCGAGGTATT CGCGGTTGGCCTCCCGGCCGACGGC CGGCGA GTCGGTGGGCGGGACGCCGTCGGCG TTCTTCCTCAGCGCC SCO0960 1013830 - 1011212 - | hydrolase (secreted protein) glgC 1015250 - 1014030 - | glucose-1-phosphate adenylyltransferase SCO0962 1016463 - 1015300 - | glycosyl transferase SCO0963 1017394 - 1016501 - | hypothetical protein SCO0964 1018138 - 1017707 - | hypothetical protein SCO0965 1018838 - 1018179 - | hypothetical protein SCO0966 1019903 - 1018944 - | dehydratase SCO0967 1020594 - 1019971 - | reductase SCO0968 1021237 - 1020695 - | hypothetical protein SCO0969 1022009 - 1021386 - | reductase SCO0970 1022813 - 1022079 - | dehydrogenase/reductase (secreted protein) SCO0971 1023053 - 1023964 + | LysR family trancsriptional regulator SCO0972 1024039 - 1024383 + | transposase remnant SCO0973 1024508 - 1025767 + | integral membrane protein SCO0974 1027076 - 1025757 - | secreted protein SCO0975 1027393 - 1028832 + | 6-phosphogluconate dehydrogenase SCO0976 1029955 - 1028822 - | hypothetical protein SCO0977 1030341 - 1029991 - | hypothetical protein SCO0978 1030806 - 1030387 - | aspartate alpha-decarboxylase SCO0979 1031372 - 1031136 - | hypothetical protein SCO0980 1031600 - 1031956 + | hypothetical protein SCO0981 1033445 - 1031976 - | DNA-binding protein SCO0982 1033827 - 1035107 + | isocitrate lyase SCO0983 1035208 - 1036800 + | malate synthase SCO0984 1036797 - 1037666 + | 3-hydroxybutyryl-CoA dehydrogenase TERM 219 1037776 - 1037738 - f 73 -16 -2.93623 | opp_overlap 1037742 1037770, overlap 1037735 1037733 1037741 GTGGCGAAAACAGGA GAAGGGCGGGACGCGC GAGTACG GCGCTTCCCGCCTTTC GGCGTACCGGAAGGG TERM 220 1037773 - 1037741 - f 72 -11.9 -3.60884 | opp_overlap 1037742 1037770, overlap 1037738 1037735 1037733 GCGAAAACAGGAGAA GGGCGGGACGCGC GAGTACG GCGCTTCCCGCCT TTCGGCGTACCGGAA TERM 221 1037742 - 1037772 + F 77 -15.4 -3.57144 | opp_overlap 1037741 1037738 1037735 1037733, overlap 1037770 CGAAAACAGGAGAAG GGCGGGACGCGC GAGTACG GCGCTTCCCGCC TTTCGGCGTACCGGA SCO0985 1038243 - 1040561 + | 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase SCO0986 1040764 - 1041465 + | integral membrane protein SCO0987 1041692 - 1043245 + | integral membrane protein SCO0988 1043277 - 1043969 + | acetyltransferase SCO0989 1044394 - 1043990 - | hypothetical protein SCO0990 1045668 - 1044679 - | integral membrane protein SCO0991 1046251 - 1047114 + | hypothetical protein SCO0992 1047111 - 1048133 + | cysteine synthase SCO0993 1048130 - 1049368 + | hypothetical protein SCO0994 1049361 - 1050626 + | integral membrane protein SCO0995 1050595 - 1051344 + | methyltransferase TERM 222 1051357 - 1051382 + F 74 -9.7 -4.16681 | opp_overlap 1051345 1051342, overlap 1051349 TGACGCAGGGCACGA GGGCGTGCG CGCAGGTC TGCACGCCC TTTTGGCCTCGTCTT SCO0996 1051613 - 1052656 + | lipoprotein SCO0997 1052653 - 1053768 + | Fe uptake system integral membrane protein SCO0998 1053765 - 1054583 + | Fe uptake system permease TERM 223 1054648 - 1054688 + T 83 -16.8 -3.31144 | opp_overlap 1054653, overlap 1054652 CGTCCGACCGCTGCA CGAAAGGGCCCCCGCCAG GAGTG CTTGCGGGAGCCCCTTCG TTGTGCACCTGCCCG TERM 224 1054683 - 1054653 - T 90 -16.1 -3.72893 | opp_overlap 1054652 1054648 GACCGCTGCACGAAA GGGCCCCCGCCAG GAGTG CTTGCGGGAGCCC CTTCGTTGTGCACCT SCO0999 1055401 - 1054754 - | superoxide dismutase SCO1000 1056995 - 1055883 - | integrase SCO1001 1057387 - 1057749 + | hypothetical protein SCO1002 1058278 - 1057892 - | hypothetical protein TERM 225 1058421 - 1058458 + G 70 -16.1 -2.70932 | CGGCGGCCGCAGCGC CCGCGTCCGTGCCGCCG TACA CGGCGCCGCGGTCGCGC TGGTTGCCGAACGCG TERM 226 1058595 - 1058554 - g 73 -16.5 -3.01712 | CGGCGCTGGGGAACA CTCGCCGCACTCCTGGCCG ACAT CGCCCAGCACCGCGGCGAG TCAGGCGCGCCTCCG SCO1003 1058377 - 1058961 + | TetR family transcriptional regulator SCO1004 1059873 - 1059073 - | hypothetical protein SCO1005 1060181 - 1061398 + | insertion element SCO1006 1061552 - 1061415 - | hypothetical protein SCO1007 1063013 - 1061871 - | oxidoreductase SCO1008 1063185 - 1063520 + | hypothetical protein SCO1009 1064155 - 1063535 - | transposase SCO1010 1064858 - 1066294 + | integral membrane transport protein SCO1011 1068241 - 1066337 - | hypothetical protein SCO1012 1069098 - 1068298 - | oxidoreductase SCO1013 1069633 - 1069154 - | mut-like protein SCO1014 1071315 - 1069702 - | transferase SCO1015 1071656 - 1071312 - | hypothetical protein SCO1016 1072544 - 1071720 - | secreted protein SCO1017 1073219 - 1072677 - | lipoprotein SCO1018 1074141 - 1073299 - | glutamate racemase SCO1019 1074142 - 1075377 + | integral membrane protein SCO1020 1076719 - 1075397 - | hypothetical protein SCO1021 1077009 - 1077458 + | hypothetical protein SCO1022 1077501 - 1078328 + | hypothetical protein SCO1023 1078574 - 1079182 + | hypothetical protein SCO1024 1079228 - 1081729 + | hypothetical protein SCO1025 1084137 - 1081780 - | integral membrane protein SCO1026 1084395 - 1085219 + | transcriptional regulatory protein SCO1027 1085351 - 1085824 + | hypothetical protein SCO1028 1086983 - 1085859 - | lyase TERM 227 1087101 - 1087075 - H 86 -15.2 -3.87815 | overlap 1087076 TCTCACCTGCATAAA CGCCCCTTTGAG TGC CTCAAAGGGGCC CCTGGGGTACACGGC TERM 228 1087100 - 1087076 - H 84 -18.7 -2.92475 | overlap 1087075 CTCACCTGCATAAAC GCCCCTTTGAG TGC CTCAAAGGGGC CCCTGGGGTACACGG SCO1029 1087360 - 1087587 + | hypothetical protein SCO1030 1087803 - 1088321 + | hypothetical protein SCO1031 1091114 - 1088547 - | ABC transport system integral membrane protein SCO1032 1091860 - 1091111 - | ABC transport system ATP-binding protein SCO1033 1092141 - 1091857 - | hypothetical protein SCO1034 1092244 - 1092897 + | TetR family transcriptional regulator TERM 229 1093256 - 1093205 - g 77 -16.4 -3.21099 | gap 1, overlap 1093206 CTGGCGTACGAGGAA GGCGGCGCCGCCGGCAGCCCCGCGC GGC ACGCGGTCCTG-CGGCGGCACCGGG TGCCGGAGGGGGTGC TERM 230 1093255 - 1093206 - g 80 -19.9 -2.52516 | gap 1, overlap 1093205 TGGCGTACGAGGAAG GCGGCGCCGCCGGCAGCCCCGCGC GGC ACGCGGTCCTG-CGGCGGCACCGG GTGCCGGAGGGGGTG SCO1035 1092908 - 1093495 + | hypothetical protein SCO1036 1093492 - 1094400 + | phosphotriesterase-family protein SCO1037 1094465 - 1094866 + | hypothetical protein SCO1038 1094911 - 1095258 + | hypothetical protein SCO1039 1096518 - 1095280 - | regulatory protein TERM 231 1096294 - 1096256 - G 84 -21.6 -2.91264 | TCGGCGACCGAGAGA CGGTGCGAGGGGCGGCCC TGG GAGCCGCCCGCCGCGCCG GGTCTGGCGTCCACC SCO1040 1097206 - 1096556 - | DNA repair protein SCO1041 1097282 - 1098505 + | hypothetical protein SCO1042 1098966 - 1098616 - | hypothetical protein SCO1043 1099030 - 1099809 + | transcriptional regulatory protein SCO1044 1100772 - 1099831 - | secreted protein SCO1045 1100965 - 1101198 + | metal associated protein SCO1046 1101284 - 1103545 + | metal transporter ATPase SCO1047 1103835 - 1104527 + | integral membrane protein SCO1048 1104952 - 1104500 - | secreted protein SCO1049 1106194 - 1105031 - | secreted oxidoreductase TERM 232 1106343 - 1106375 + H 72 -12.7 -3.57651 | gap 1, overlap 1106346 CGACTGGCGCGGGGG GACCGGGACCGGCG GTATCG CGCCGG-CCCGCTC TTCTGTCCTCTCCGG SCO1050 1106404 - 1107006 + | DNA protection protein TERM 233 1107047 - 1107092 + G 73 -15.4 -3.28712 | gap 2, opp_overlap 1107028 1107040 GCAGGAGACCGACGA CGGCGG--GCCGGCGCGCGGGC GGTG GTCCGCGTTCCGGCAGTCGCCG TTCTGGCCGGCCACC SCO1051 1107018 - 1108091 + | integral membrane protein SCO1052 1108778 - 1108110 - | regulatory protein TERM 234 1108739 - 1108751 + g 73 -10.5 -3.86346 | CGGTGTCGGGACGGT CCGCC ACG GGCGG TTTCTCGGCGCGTAC SCO1053 1109432 - 1109004 - | hypothetical protein SCO1054 1109450 - 1110652 + | aminotransferase TERM 235 1110694 - 1110731 + T 90 -21.3 -2.78463 | opp_overlap 1110701 CGAGGATGCCCGGCA GAGCGAAGCGGCACGCG CCCC CGCGTGCCGCTTCGCCG TGTGGTCCACCCGCT TERM 236 1110724 - 1110701 - T 85 -19.6 -3.12351 | opp_overlap 1110694 GCCCGGCAGAGCGAA GCGGCACGCG CCCC CGCGTGCCGC TTCGCCGTGTGGTCC SCO1055 1113025 - 1110755 - | alpha-xylosidase YicI TERM 237 1113288 - 1113265 - H 91 -9.5 -4.97158 | overlap 1113267 TCACATCAAACAAAA CAGTCCGGC GAGGAA GCCGGACGG TACGACAGCAAGGGC TERM 238 1113286 - 1113267 - H 77 -10.7 -4.09862 | overlap 1113265 ACATCAAACAAAACA GTCCGGC GAGGAA GCCGGAC GGTACGACAGCAAGG SCO1056 1113337 - 1114596 + | sugar transport sugar binding protein SCO1057 1114608 - 1115573 + | sugar transport integral membrane protein SCO1058 1115579 - 1116406 + | sugar transport integral membrane protein SCO1059 1116447 - 1117826 + | beta-glucosidase SCO1060 1119111 - 1117870 - | transcriptional repressor TERM 239 1117936 - 1117980 + g 93 -19.2 -3.62275 | gap 1 GACGATCGCGCCGGC CGCGCCCCGGGCCGCGTCGCC GAGC GGGGACGCGGCCCGCAGC-CG TTTGCCGTCCTCGCT SCO1061 1120834 - 1119167 - | bifunctional protein (secreted sugar binding protein/sugar hydrolase) SCO1062 1123006 - 1120925 - | hydrolase SCO1063 1123960 - 1123067 - | sugar transport integral membrane protein SCO1064 1124898 - 1123963 - | sugar transport integral membrane protein SCO1065 1126256 - 1124895 - | sugar transport sugar binding protein TERM 240 1125348 - 1125291 - G 77 -16.3 -3.21099 | gap 3 CGCCGGGATGATGAA GCTGCTGCCGCCCATGG-CGCCGCTGCG CGCCC CGCC-CGGCGTCCA-GGCCGGCAGCGGC GCGGCCCGCCACTTG TERM 241 1126349 - 1126389 + H 77 -14.6 -3.54424 | gap 1 CGCAGGCGTCGTCGG CGGC-GCGGCGGCCGGCAC GAAG GTCCCGTCCGCCGCCGCAG TTTGCAACGATGCAG SCO1066 1126535 - 1127557 + | LacI family transcriptional regulator TERM 242 1127707 - 1127686 - f 78 -2.9 -4.78326 | gap 1, overlap 1127700 1127701 CCGCAAATAAACAAA GCCCGATCGC ACA ACG-TCGTGC CGGGTTCCCGCGACG SCO1067 1127704 - 1128876 + | integral membrane transport protein TERM 243 1129240 - 1129289 + G 77 -16.3 -3.28712 | gap 1, overlap 1129227 1129241 CCCTCACCGGCGCCG CGCCCGAGGTG-CGGTGCTGGCAG TTC CTGCCCGCGCCGTCACCGCTGGCC TTCTGGGCCAGGCGG TERM 244 1129241 - 1129288 + G 81 -19.8 -2.57132 | gap 1, overlap 1129227 1129240 CCTCACCGGCGCCGC GCCCGAGGTG-CGGTGCTGGCAG TTC CTGCCCGCGCCGTCACCGCTGGC CTTCTGGGCCAGGCG SCO1068 1128954 - 1129694 + | hypothetical protein SCO1069 1130195 - 1129716 - | MarR family transcriptional regulator SCO1070 1131094 - 1130429 - | two component system response regulator SCO1071 1132338 - 1131091 - | two component system sensor kinase SCO1072 1132462 - 1132683 + | hypothetical protein SCO1073 1134012 - 1132744 - | hydrogenase SCO1074 1134157 - 1135512 + | hypothetical protein SCO1075 1136689 - 1135646 - | bifunctional protein (ATP/GTP binding protein/MutT-like) TERM 245 1136821 - 1136782 - R 100 -27.2 -2.65766 | gap 1, overlap 1136772 1136784 GGAAAGGGCATATGA CAGCGGCGCCGACGCCCCC CTC GGGGGCGACGGCGCCG-TG TGGACCCGACCGGGC TERM 246 1136820 - 1136784 - R 95 -26.5 -2.86743 | overlap 1136782 1136772 AAAGGGCATATGACA GCGGCGCCGACGCCCCC CTC GGGGGCGACGGCGCCGT GTGGACCCGACCGGG SCO1076 1137052 - 1136858 - | secreted protein SCO1077 1138101 - 1137148 - | sugar kinase TERM 247 1138160 - 1138139 - H 83 -5.7 -4.81851 | overlap 1138150 1138152 1138153 ACCGAAAGCGAAAAA GCCGTACAC AAGA GCGCGCGGC GACCGGCCCCGGGGT SCO1078 1138342 - 1139391 + | LacI family transcriptional regulator SCO1079 1139479 - 1140312 + | hypothetical protein SCO1080 1141591 - 1140293 - | hypothetical protein SCO1081 1142721 - 1141759 - | electron transfer flavoprotein, alpha subunit TERM 248 1142146 - 1142176 + g 71 -15.4 -3.15544 | CAGCTCCGGACGGCC GGTCGACTCGCGCG GCG TGCGCGAGGTGACC TTGGTGCCGGTCGCG SCO1082 1143565 - 1142777 - | electron transfer flavoprotein, beta subunit SCO1083 1144295 - 1143786 - | flavin-dependent reductase SCO1084 1144822 - 1144442 - | thioredoxin SCO1085 1145088 - 1145816 + | acyltransferase SCO1086 1146426 - 1145827 - | hypothetical protein TERM 249 1145950 - 1146007 + g 100 -24.9 -3.61398 | opp_overlap 1145989 CTCACCCGCCGCGTG GTCCGGCGTGAAGGCCAGCTGCTCCCT GCCC AGGGAGAAGCGCGCGTTCACGCCGGGC TTGTTCCCGCGCGGA SCO1087 1147556 - 1146486 - | aldolase TERM 250 1146935 - 1146987 + g 74 -16.3 -3.12351 | gap 1, opp_overlap 1146929 GGGAGAGGAGGTCGA CGCCGACCGCGTTGGTGAACGTGC GCATGG GCACGTCCAGCGAGGCGG-CGGCG TTGGCTATCCGGGAG TERM 251 1147315 - 1147280 - G 81 -19.8 -2.62184 | gap 1 TCTCGGCGCAGATCA CCGCGCCCCA-GCGGTC GGT GACCGCCTGGAGCGCGA CGACGTTGGCGCCGG SCO1088 1148371 - 1147553 - | oxidoreductase SCO1089 1149771 - 1148368 - | hypothetical protein SCO1090 1149998 - 1150681 + | phosphodiesterase SCO1091 1151272 - 1150733 - | acetyltransferase SCO1092 1151356 - 1151748 + | hypothetical protein SCO1093 1151783 - 1152634 + | hydroxylase SCO1094 1152798 - 1153376 + | TetR family transcriptional regulator TERM 252 1153452 - 1153417 - f 82 -9.7 -4.42386 | gap 1 GGGCGATCCATAAAA GTCGCCGGTGCTCCCT CTGAC ACGG-GAACCGGCGAC CCCACCCCGCCGCAA SCO1095 1153488 - 1154504 + | hypothetical protein SCO1096 1154572 - 1154766 + | hypothetical protein SCO1097 1154808 - 1155686 + | hydrolase SCO1098 1156292 - 1155717 - | MarR family regulatory protein SCO1099 1158022 - 1156289 - | integral membrane protein SCO1100 1158218 - 1158796 + | integral membrane protein SCO1101 1158944 - 1159879 + | integral membrane protein SCO1102 1160123 - 1160794 + | integral membrane protein SCO1103 1160876 - 1161565 + | hydrolase SCO1104 1161710 - 1162411 + | TetR family transcriptional regulator SCO1105 1163901 - 1162399 - | secreted protein SCO1106 1164110 - 1164766 + | lipoprotein SCO1107 1165264 - 1164809 - | hypothetical protein SCO1108 1165774 - 1165403 - | regulatory protein SCO1109 1165916 - 1166995 + | oxidoreductase TERM 253 1167229 - 1167211 - g 73 -17.4 -2.62263 | overlap 1167197 ACCGCTGTGACACGA CCGCGCGC GCG GCGCGCGG TGACCGGCGCGCTGG SCO1110 1167193 - 1167993 + | secreted lyase TERM 254 1168031 - 1167994 - T 78 -17.7 -2.60808 | gap 1, overlap 1167990 1167991 ATCACCTACAAGTGA CGCGTCAGGTCCGGGGGC CGT GCGCCCGGACCTGCC-CG GACTGCTCCCGCTGA SCO1111 1168804 - 1167998 - | hypothetical protein SCO1112 1168853 - 1170556 + | oxidoreductase SCO1113 1170638 - 1171792 + | hypothetical protein SCO1114 1171863 - 1172540 + | uracil-DNA glycosylase SCO1115 1172537 - 1173535 + | hypothetical protein SCO1116 1173674 - 1174600 + | hypothetical protein TERM 255 1174637 - 1174666 + T 93 -22.2 -3.05384 | CCAGGCCTGCGTGAA GGGGCCCGCTCC TCTGCC GGAGCGGGCCCC TTCCGTACGGCCCGG SCO1117 1175927 - 1174890 - | secreted protein SCO1118 1177579 - 1176089 - | integral membrane protein TERM 256 1177659 - 1177637 - H 100 -18.4 -4.24948 | opp_overlap 1177628 TCACCACATGCAAAA GGCGCCGCGG GGT CCGCAGCGCC ATCGACAGGTCTATA SCO1119 1177797 - 1178273 + | transcription regulator AsnC SCO1120 1178294 - 1179010 + | hydrolase SCO1121 1179094 - 1179834 + | secreted protein SCO1122 1180792 - 1179956 - | regulatory protein SCO1123 1180851 - 1181249 + | hypothetical protein SCO1124 1181857 - 1181366 - | integral membrane protein SCO1125 1182421 - 1181900 - | hypothetical protein SCO1126 1183572 - 1182418 - | hypothetical protein SCO1127 1183673 - 1184611 + | oxidoreductase SCO1128 1184628 - 1185536 + | integral membrane protein TERM 257 1186124 - 1186157 + G 73 -17.3 -2.62263 | CTCACCTCCGGTCGC TGGGCGGCCGCCCGG CGGG CCGGGCTGCGGCCCG TGCTGTGGACGGCGT SCO1129 1185632 - 1186480 + | secreted deacetylase SCO1130 1186491 - 1188266 + | hypothetical protein SCO1131 1189481 - 1188324 - | hypothetical protein SCO1132 1191621 - 1189474 - | oxidoreductase SCO1133 1192610 - 1191618 - | oxidoreductase, molybdopterin binding subunit SCO1134 1193209 - 1192607 - | oxidoreductase, iron-sulphur binding subunit TERM 258 1193354 - 1193308 - H 70 -12.5 -3.29263 | gap 1, opp_overlap 1193309, overlap 1193309 1193316 1193335 1193340 AGAGTGGGCGGACAA CCGGACAACTGTCCATT-CACT GGAA AACGTAACGGACAGTTGTCCGC TTAGCAAGGTCGGGA TERM 259 1193353 - 1193309 - H 71 -16 -2.57344 | gap 1, opp_overlap 1193309, overlap 1193308 1193316 1193335 1193340 GAGTGGGCGGACAAC CGGACAACTGTCCATT-CACT GGAA AACGTAACGGACAGTTGTCCG CTTAGCAAGGTCGGG SCO1135 1193398 - 1193988 + | TetR family transcriptional regulator SCO1136 1194742 - 1193951 - | two component system response regulator SCO1137 1196385 - 1194739 - | two component system histidine kinase TERM 260 1197591 - 1197566 - g 70 -13.9 -3.18681 | CGTCAACTTCACCAA CTGGCGGGGCA TCGT CGCCCCGCCCG GCCTGTCCGAGGCCC SCO1138 1196781 - 1197779 + | secreted protein SCO1139 1197776 - 1198321 + | integral membrane protein SCO1140 1198323 - 1199822 + | integral membrane protein SCO1141 1200311 - 1199889 - | hypothetical protein SCO1142 1200394 - 1201473 + | oxidoreductase SCO1143 1202247 - 1201486 - | hypothetical protein TERM 261 1201915 - 1201963 + g 82 -14.6 -3.95324 | gap 2, opp_overlap 1201914 GACCGCCTGATAGAC GTTCAGCGCGTTGCGCTGGGCGCC CGC GGCGACCGGCGCG-C-CGGTGAAC TTCTTGTTCGCCGTG SCO1144 1204282 - 1202480 - | ABC transporter ATP-binding protein SCO1145 1204428 - 1204889 + | MarR family regulatory protein SCO1146 1205669 - 1204911 - | lipoprotein SCO1147 1205898 - 1207775 + | ABC transporter transmembrane subunit SCO1148 1207772 - 1209553 + | ABC transporter SCO1149 1209788 - 1210258 + | hypothetical protein rpmE2 1210322 - 1210594 + | 50S ribosomal protein L31 type B SCO1151 1211409 - 1210615 - | integral membrane protein TERM 262 1211138 - 1211158 + g 74 -11.8 -3.73534 | overlap 1211140 1211152 GTGCGGTGCCCGCCG GTGCGGCG CGGGT CGCCGCGC TTCTTCGTGGCCTTG SCO1152 1211504 - 1214068 + | helicase SCO1153 1214088 - 1214954 + | acyl-CoA thioesterase II SCO1154 1215927 - 1214956 - | hypothetical protein TERM 263 1215008 - 1215031 + g 70 -13.8 -3.31144 | overlap 1215009 CTCAGCCGTCCGGGT TGCCGCGCCG CGCG CGGTGCGGCG TTCTCCCCCTCGGGC SCO1155 1216478 - 1216065 - | hypothetical protein SCO1156 1216584 - 1217012 + | hypothetical protein SCO1157 1217655 - 1217041 - | ATP/GTP binding protein SCO1158 1218137 - 1217724 - | hypothetical protein SCO1159 1218593 - 1218156 - | hypothetical protein SCO1160 1221178 - 1218590 - | hypothetical protein TERM 264 1218947 - 1218905 - G 72 -11.9 -3.66356 | gap 1, opp_overlap 1218903 ATCGGGAAGGTCAAA GGACCGGTGCAGTCGCAGCG CGGG CGCTCCGGCAG-ACCGGCCC GATGTGGTGGTGCGC TERM 265 1218979 - 1219017 + g 93 -17.5 -3.78775 | gap 1 TCGCCGCCGGTACGG CGGATGTCAGCGCCGGCC GGGC GGTCGGCGCTGACA-CGG TTTCCTGCTGCCCGG TERM 266 1220552 - 1220534 - G 72 -11.6 -3.59979 | overlap 1220545 GCCCCCCACGTGAAA GGCGGCAG AGA CGGCCGCC GTGTAGCGGCGATAG SCO1161 1221975 - 1221241 - | integral membrane protein SCO1162 1222188 - 1222787 + | methyltransferase SCO1163 1224134 - 1223235 - | hypothetical protein SCO1164 1224211 - 1224537 + | hypothetical protein SCO1165 1224677 - 1225594 + | integral membrane protein SCO1166 1225983 - 1225651 - | integral membrane protein TERM 267 1225902 - 1225878 - G 71 -8.5 -4.07568 | overlap 1225882 TCTCTGTCCTGAAAA CGGACCCGC GCTCGTG GCGGTTCCG CGGCGCGACCCTGAG SCO1167 1226297 - 1228969 + | helicase SCO1168 1228966 - 1230234 + | hypothetical protein TERM 268 1230273 - 1230307 + T 83 -17.1 -3.30124 | opp_overlap 1230275, overlap 1230274 TGACGCCCCGCACGA GATCCGGCCCCGTCC GCGAA GGACGGGGCCGGACA TTCTCACGGGTGCCG TERM 269 1230274 - 1230306 + T 85 -20.6 -2.57931 | opp_overlap 1230275, overlap 1230273 GACGCCCCGCACGAG ATCCGGCCCCGTCC GCGAA GGACGGGGCCGGAC ATTCTCACGGGTGCC TERM 270 1230305 - 1230275 - T 95 -24.1 -2.78463 | opp_overlap 1230274 1230273 ACGCCCCGCACGAGA TCCGGCCCCGTCC GCGAA GGACGGGGCCGGA CATTCTCACGGGTGC SCO1169 1231492 - 1230329 - | xylose isomerase TERM 271 1231752 - 1231707 - g 71 -15.3 -3.16881 | gap 1 CACCCAGTCCACCAA GGCGCTGGTCGTCGACGCGGCC ACC GGCCGGGTCGTCG-CGAGCGGC CAGGCGCCCCACACC SCO1170 1231648 - 1233093 + | xylulose kinase SCO1171 1233319 - 1234527 + | xylose repressor SCO1172 1234835 - 1235440 + | amidase (secreted protein) SCO1173 1235615 - 1236874 + | transcriptional regulator TERM 272 1237167 - 1237128 - g 79 -16.4 -3.31792 | GCAGTACTTCGAGAA CCCGTCCCCGGTGAACGG CCTG CCGTTCACCGAGATCGCG CGCGGCACGGCCGAC SCO1174 1237012 - 1238535 + | aldehyde dehydrogenase SCO1175 1239002 - 1238595 - | hypothetical protein SCO1176 1241453 - 1239663 - | dihydroxy-acid dehydratase SCO1177 1241562 - 1242302 + | gntR-famly transcriptional regulator SCO1178 1242783 - 1242334 - | hypothetical protein SCO1179 1243575 - 1242817 - | hypothetical protein SCO1180 1243639 - 1244799 + | DNA polymerase III beta chain SCO1181 1244920 - 1245774 + | hypothetical protein TERM 273 1250723 - 1250666 - g 75 -13.4 -3.61398 | gap 3, opp_overlap 1250712 CGCGCGGTCGAAGAA GGTCCG-GGCCGAGCTGGCCGCCACGGAC CTG GTC-GTCGAGGCCAGA-CGGCCGCGGGCC GGCCGTTCCCTCTTC SCO1182 1245771 - 1250951 + | hypothetical protein SCO1183 1251004 - 1252173 + | hypothetical protein SCO1184 1252179 - 1256141 + | hypothetical protein SCO1185 1256138 - 1258141 + | hypothetical protein TERM 274 1258351 - 1258310 - g 72 -11.5 -3.61894 | gap 2 AAGGGTCGTCAACAA CGCGGC-CGGCG-TGCGCG ACTCGA CGCGCCGCGCCGTGCAGCG GGCCATCGCCGAGCT SCO1186 1258218 - 1259243 + | LacI family transcriptional regulator TERM 275 1259484 - 1259521 + G 85 -19.7 -3.03159 | overlap 1259482 1259514 GTTACGGCCCCAGGC CCGCGCCCCGCGCGGCC TCTT GGCGGCCCTGGGCGCGG TCTTAGCGGCCTTCG SCO1187 1259461 - 1260606 + | secreted cellulase B precursor SCO1188 1260854 - 1261948 + | secreted cellulose binding protein SCO1189 1262121 - 1262546 + | hypothetical protein SCO1190 1264110 - 1262509 - | export protein SCO1191 1264656 - 1264183 - | MarR family transcriptional regulator TERM 276 1264382 - 1264435 + g 83 -15.1 -3.68936 | gap 1 TTGTCGGCGCTGTCC CGCCGGCGCTCCAGGTCACCCTGCTC GAC GAGCTGGGAGACCAGG-GCACTGACG TTGTTCGGCTTCATC SCO1192 1264780 - 1265148 + | hypothetical protein SCO1193 1265739 - 1265170 - | TetR family transcriptional regulator SCO1194 1265841 - 1267331 + | export protein SCO1195 1267515 - 1267321 - | hypothetical protein TERM 277 1267524 - 1267578 + r 80 -16.6 -3.14211 | CGGCCATCGTCAACC TCCTCCGCCACGTC-CACTTCGCGGC GTTCG GCCGT-AAGTGTGGCGTAGCGGAGGG TTCGTCCGGGCGGCT SCO1196 1268493 - 1267630 - | secreted protein SCO1197 1269751 - 1268663 - | acyl-CoA dehydrogenase SCO1198 1270929 - 1269748 - | acyl-CoA dehydrogenase SCO1199 1271906 - 1270926 - | oxidoreductase SCO1200 1272566 - 1271991 - | regulatory protein SCO1201 1272644 - 1273609 + | reductase ligB 1273700 - 1275238 + | ATP-dependent DNA ligase SCO1203 1275235 - 1275696 + | MutT-like protein gabD1 1275830 - 1277215 + | succinic semialdehyde dehydrogenase SCO1205 1277253 - 1277477 + | hypothetical protein SCO1206 1277625 - 1278749 + | polyketide synthase SCO1207 1278746 - 1279960 + | cytochrome P450 SCO1208 1279957 - 1280490 + | hypothetical protein SCO1209 1281713 - 1280487 - | acyl-CoA dehydrogenase SCO1210 1281884 - 1282540 + | transcriptional regulatory protein SCO1211 1283235 - 1282582 - | polypeptide deformylase SCO1212 1283300 - 1284538 + | ligase SCO1213 1284562 - 1285290 + | hypothetical protein SCO1214 1285457 - 1286482 + | 6-phosphofructokinase TERM 278 1286578 - 1286609 + F 100 -23 -3.36968 | TTTGGGGCGCTTTCC CCGCCCCCGGTCGC AGAT GTGGCCGGGGGCGG TTCTACGCTTGGCTC SCO1215 1286676 - 1287626 + | integral membrane protein SCO1216 1287637 - 1287840 + | integral membrane protein SCO1217 1289096 - 1287879 - | sensor kinase SCO1218 1290928 - 1289093 - | transmembrane transport protein SCO1219 1291352 - 1290957 - | integral membrane protein SCO1220 1292117 - 1291356 - | regulatory protein SCO1221 1292195 - 1292698 + | transcription regulator AsnC TERM 279 1293204 - 1293236 + G 79 -12 -4.07568 | gap 1 CGAGGGCGACCTGGT CCCG-GCCGGCCG CTGGATCC TGGCCGGCACGGG TTTTCGCACCACCCG SCO1222 1292824 - 1293690 + | hypothetical protein SCO1223 1293687 - 1294910 + | ornithine aminotransferase SCO1224 1295384 - 1294926 - | sugar-phosphate isomerase SCO1225 1295526 - 1297040 + | osmoprotectant transporter TERM 280 1297056 - 1297114 + T 95 -26.4 -2.92102 | gap 4, opp_overlap 1297058 1297060, overlap 1297057 CGCCGCGGTCGCAAG --C--ACACGCCGACGGGCGGTGGGGTTCG GTG CGAACCCCACCGCCCGTCGGCGTGTCAGGC GTTTCTCAGCGGTGT TERM 281 1297057 - 1297115 + T 78 -12.1 -3.87373 | gap 6, opp_overlap 1297058 1297060, overlap 1297056 GCCGCGGTCGCAAGC ------ACACGCCGACGGGCGGTGGGGTTCG GTG CGAACCCCACCGCCCGTCGGCGTGTCAGGCG TTTCTCAGCGGTGTG TERM 282 1297108 - 1297058 - T 100 -47.2 -2.70932 | opp_overlap 1297056 1297057, overlap 1297060 CCGCGGTCGCAAGCA CACGCCGACGGGCGGTGGGGTTCG GTG CGAACCCCACCGCCCGTCGGCGTG TCAGGCGTTTCTCAG TERM 283 1297106 - 1297060 - T 100 -44 -2.90075 | opp_overlap 1297056 1297057, overlap 1297058 GCGGTCGCAAGCACA CGCCGACGGGCGGTGGGGTTCG GTG CGAACCCCACCGCCCGTCGGCG TGTCAGGCGTTTCTC SCO1226 1300331 - 1297131 - | bifunctional protein SCO1227 1302070 - 1300601 - | DNA-binding protein TERM 284 1301779 - 1301740 - G 73 -17 -3.02144 | GCAGCGGCGTGAACA GCGCCGGGTCGGCCGGGA AGCG TCCCGGCCTCCGCGGCAC CTCGCGCGGCGCGGC SCO1228 1302287 - 1303009 + | acyltransferase SCO1229 1303058 - 1304119 + | reductase SCO1230 1305813 - 1304188 - | secreted tripeptidylaminopeptidase SCO1231 1306731 - 1305967 - | urease accessory protein SCO1232 1307405 - 1306728 - | urease accessory protein SCO1233 1308245 - 1307571 - | urease accessroy protein ureC 1309975 - 1308254 - | urease subunit alpha ureB 1310279 - 1309968 - | urease subunit beta ureA 1310595 - 1310293 - | urease subunit gamma SCO1237 1311104 - 1310820 - | hypothetical protein TERM 285 1311663 - 1311621 - g 71 -15.4 -3.05384 | CCGGCGCTCACCGAA CCGGTGCGTGGACAGGCGGG CGA CCTGGCCGTCCACGCCGCGG AACTGGTCCGTGTCC SCO1238 1311216 - 1311851 + | ATP-dependent Clp protease SCO1239 1311859 - 1312167 + | hypothetical protein TERM 286 1312457 - 1312436 - f 73 -13.7 -3.4252 | gap 1, overlap 1312420 CGTGACTGACGACAA GCCCTCGCCG CCG CGGCG-GGGC GGTCCGGGCGGACGC SCO1240 1312684 - 1313157 + | NLP/P60 family protein (secreted protein) SCO1241 1313640 - 1313128 - | hypothetical protein TERM 287 1313211 - 1313157 - G 100 -38.1 -2.70932 | gap 1 CGGCCGGGTCAAGTA GCC-CGCCCGCGGGGGTGACGGCG TTCTGTCC CGCCGTCACCCCCGCGGGCGCGGC CGGTCCGGGCGGGGG SCO1242 1313856 - 1314716 + | DNA-binding protein SCO1243 1316138 - 1315011 - | 8-amino-7-oxononanoate synthase SCO1244 1316289 - 1317512 + | biotin synthase SCO1245 1317505 - 1318791 + | adenosylmethionine--8-amino-7-oxononanoate transaminase bioD 1318793 - 1319509 + | dithiobiotin synthetase SCO1247 1319887 - 1320564 + | hypothetical protein SCO1248 1320960 - 1320586 - | hypothetical protein SCO1249 1321207 - 1320980 - | hypothetical protein SCO1250 1321315 - 1321740 + | acetyltransferase TERM 288 1322239 - 1322277 + G 81 -14.4 -3.73402 | CGTGGCCAAGCGGGT GGGCGGGCCGCAGCGCTG GTT CAGCGCGGTCTTCCGCCC TTTCATCACCCATCT SCO1251 1321823 - 1323229 + | integral membrane protein SCO1252 1323226 - 1324239 + | integral membrane protein SCO1253 1324336 - 1325118 + | hypothetical protein TERM 289 1325801 - 1325749 - g 77 -16.3 -3.28712 | CGGCCGCTCGCACAA CGT-GGCGGCGCAGGCGACGACGCT GGGCA AGCGGT-TCGCCAGCGCCGCCGACG AGCTGCTCGTGGCGT SCO1254 1325285 - 1326727 + | adenylosuccinate lyase TERM 290 1326746 - 1326802 + F 76 -16.7 -2.80074 | overlap 1326771 1326772 GCTTCACCAGGGCCG AGCTGGAGGCCGCCCGCGAC--CGTCTCG TAC CG-GACGTCGTCGCGGACGGCCTCC-GCG TGCTGTTCTGCGGCA SCO1255 1326802 - 1327284 + | G/U mismatch-specific DNA glycosylase SCO1256 1327924 - 1327484 - | hypothetical protein TERM 291 1327995 - 1327937 - R 70 -10.2 -3.72893 | gap 2, overlap 1327954 1327955 CATGCGTCCAGTAAA CCCGCCGCCACTGACAATTGGCGGGGCG TCAGC CGCCCCGCCGGTCGTCCGT-G-GTCAGG CGTCCCGGCGGCGCA SCO1257 1328716 - 1327991 - | ABC transport system integral membrane protein SCO1258 1329639 - 1328719 - | ABC transport system ATP-binding protein SCO1259 1329747 - 1330901 + | two-component system sensor kinase SCO1260 1330916 - 1331578 + | two-component system response regulator SCO1261 1331678 - 1332832 + | transcriptional regulatory protein SCO1262 1333633 - 1332872 - | GntR family transcriptional regulator TERM 292 1333780 - 1333745 - R 73 -14.1 -3.36273 | gap 2, overlap 1333758 CTTGGTCAAGACCAA TCCCGCGACGGAACGGC CCCG GCC-C-CCGTCGCGGGA CGGGTCCGGGGCCGT TERM 293 1333794 - 1333758 - R 93 -21.6 -3.05715 | gap 1, overlap 1333745 AATCCCGCGACGGAA CGGCCCCGGCCCCCGTC GCGG GACGGGT-CCGGGGCCG TGAGATGCCGCAGGG SCO1263 1334711 - 1333824 - | ECF-sigma factor SCO1264 1334793 - 1335743 + | hydrolase SCO1265 1336564 - 1335695 - | lipase SCO1266 1337876 - 1336608 - | 3-oxoacyl-(ACP) synthase II TERM 294 1336997 - 1337043 + g 81 -17.9 -3.26471 | gap 1 GCACGTCCGCGGGGC GGGCGCCGGCGTCGTCGAG-GG CCCG CCGCACGGCGAGGGCGGCGCCC TTGCTCTCGGGGTCG SCO1267 1338130 - 1337873 - | acyl carrier protein SCO1268 1339366 - 1338248 - | acyltransferase SCO1269 1340376 - 1339363 - | pyruvate dehydrogenase beta subunit SCO1270 1341344 - 1340373 - | pyruvate dehydrogenase alpha subunit SCO1271 1342317 - 1341355 - | 3-oxoacyl-(ACP) synthase III SCO1272 1342589 - 1342317 - | acyl carrier protein SCO1273 1343779 - 1342661 - | reductase TERM 295 1344772 - 1344827 + G 100 -32.6 -3.05844 | CCTGCGGGCTGCGCC GGGTGCTGCCGGGCTCCCCGGTCACC CACC GGTGACCGGGGAGCCCGGCGACTCGC TCTTCCCGTCGCGAA SCO1274 1344147 - 1344806 + | hypothetical protein SCO1275 1344856 - 1346613 + | halogenase SCO1276 1346693 - 1347289 + | RNA polymerase ECF sigma factor SCO1277 1347343 - 1348086 + | hypothetical protein SCO1278 1348179 - 1349756 + | ATP/GTP-binding protein SCO1279 1349799 - 1350677 + | secreted protein SCO1280 1351976 - 1350735 - | hypothetical protein SCO1281 1353410 - 1352088 - | oxidoreductase SCO1282 1353985 - 1353407 - | oxidoreductase SCO1283 1354445 - 1353978 - | hypothetical protein SCO1284 1355912 - 1354527 - | aminotransferase (secreted protein) SCO1285 1357030 - 1355909 - | ketoreductase SCO1286 1358209 - 1357085 - | oxidoreductase SCO1287 1359243 - 1358281 - | hypothetical protein SCO1288 1359733 - 1359227 - | integral membrane protein TERM 296 1360057 - 1360016 - g 74 -17.1 -3.14132 | CGCGCCTTGCAGGAA GCCCTGCGCGACGCGGTCC GCTC GGGCCGGCTCGCGCCGGGC ACCCGCCTCCCGTCC SCO1289 1359896 - 1361419 + | GntR family regulatory protein SCO1290 1361564 - 1363153 + | secreted alkaline phosphatase SCO1291 1363304 - 1364707 + | hypothetical protein TERM 297 1364812 - 1364861 + G 71 -13.4 -3.55622 | gap 1 GCGGGTCGGACGGCC GAGGTCGTGGCGCTGCTCGACGG CATGA CCGACGCGCAGCGGCGCG-CCGC TTTCCCCGAGTTGAA TERM 298 1365422 - 1365471 + G 74 -16.3 -3.15861 | GGTCCGTGGTCGACG CGTGCGTGGCACGGCTGCTGCGC GGAG GCGCACCGGCCGAGCTACGGGTG TTCCTGCGCCTGCTG TERM 299 1365765 - 1365726 - g 84 -15.6 -3.73647 | gap 1, opp_overlap 1365726 GGTACTCACCAAGAA CCGGTCCGCGGCCGGTGAG TTG CTG-CCGGCCGCCGCCCGG GCGTTCGGGCACGAG SCO1292 1364716 - 1367439 + | secreted protein TERM 300 1367751 - 1367709 - g 74 -17.7 -2.78596 | CACCGGCCGACGATA CCGGCGCCCGGCCG-CCGACC GCC GAGCGGCCGGCCGGG-ACCGG ACCGGCCGGGAGCGA SCO1293 1367555 - 1368913 + | hypothetical protein SCO1294 1370161 - 1368938 - | cystathionine gamma-synthase SCO1295 1370221 - 1370712 + | transcription regulator AsnC SCO1296 1370791 - 1372479 + | hypothetical protein SCO1297 1373469 - 1372948 - | hypothetical protein SCO1298 1374042 - 1373491 - | hypothetical protein SCO1299 1374103 - 1374549 + | transcriptional regulatory protein SCO1300 1377582 - 1374583 - | exonuclease SCO1301 1378742 - 1377579 - | exonuclease TERM 301 1378821 - 1378795 - R 75 -15 -3.3506 | overlap 1378786 CGGAAACCGGCACAA GCCCGGCACGGG GGC CCCGGGCCGGCC CCACCACGCTAGCGC SCO1302 1379752 - 1379126 - | hypothetical protein TERM 302 1379245 - 1379297 + g 79 -17 -3.33261 | gap 2, overlap 1379250 CGACCTCGATGGTGA CGGCCTCGGCGTACCGCACGTCGCGC ACC GCGCGGCCCGCGGTGCG-C-AGGTCG TTCTGGAGCTTGCCG TERM 303 1379250 - 1379294 + g 76 -17.7 -2.83747 | overlap 1379245 TCGATGGTGACGGCC TCGGCGTACCGCACGTCGCGC ACC GCGCGGCCCGCGGTGCGCAGG TCGTTCTGGAGCTTG SCO1303 1380627 - 1379824 - | hypothetical protein SCO1304 1380724 - 1381131 + | hypothetical protein SCO1305 1382538 - 1381144 - | hypothetical protein SCO1306 1383788 - 1382544 - | hypothetical protein SCO1307 1385292 - 1383886 - | hypothetical protein TERM 304 1386580 - 1386611 + G 72 -14.4 -3.40403 | gap 1 GGGACCCCTACCGCG CGGGTGCCGC-GCTG GCC CGGCTGCGGCGCCTG TTCTCCTCACCGGCC SCO1308 1385454 - 1386677 + | 4-hydroxybenzoate 3-monooxygenase SCO1309 1387054 - 1386707 - | regulatory protein SCO1310 1387179 - 1388270 + | cation efflux system protein SCO1311 1388832 - 1388275 - | hypothetical protein SCO1312 1389481 - 1388876 - | transcriptional regulatory protein SCO1313 1389568 - 1390425 + | integral membrane protein SCO1314 1391259 - 1390456 - | sugar acetyltransferase TERM 305 1391643 - 1391627 - g 70 -13.7 -3.30124 | CTCCATCGGTCACAA CGCCGTG GTG CACGGCG CCACCGTCGAGGACG SCO1315 1391367 - 1391903 + | siderophore binding protein SCO1316 1392602 - 1391967 - | integral membrane protein SCO1317 1393128 - 1392691 - | hypothetical protein SCO1318 1393213 - 1394196 + | hypothetical protein SCO1319 1394273 - 1395295 + | hypothetical protein SCO1320 1396164 - 1395319 - | hypothetical protein TERM 306 1395654 - 1395607 - G 78 -17.9 -3.14132 | gap 3 TTGGCCGCGCAGGAA GCCGAACGGCGCCC-CGTCGGCCA GGT TGGCC-ACGTAGACGCCGT-CGGC GCGCAGAACCCGGGC TERM 307 1395962 - 1396007 + g 72 -16.9 -2.79183 | gap 1 AGGACGTCCAGCGTG CGCCCCGGCTCGGCGACCGT GTCCAGG ACG-TGGCCGAGCCGGCGCG TGTACTCGAACTCCA SCO1321 1397416 - 1396238 - | elongation factor Tu SCO1322 1398413 - 1397508 - | hypothetical protein SCO1323 1398463 - 1399239 + | integral membrane protein SCO1324 1400449 - 1399280 - | 3-ketoacyl-CoA thiolase/acetyl-CoA acetyltransferase SCO1325 1400584 - 1401057 + | hypothetical protein uppP 1401207 - 1402082 + | undecaprenyl pyrophosphate phosphatase SCO1327 1402574 - 1403737 + | integral membrane protein SCO1328 1404566 - 1403709 - | hypothetical protein SCO1329 1405034 - 1404801 - | hypothetical protein SCO1330 1406113 - 1405031 - | fatty acid CoA ligase SCO1331 1406138 - 1408480 + | multidomain-containing protein family SCO1332 1409722 - 1408850 - | hypothetical protein SCO1333 1410027 - 1410995 + | integral membrane protein SCO1334 1411647 - 1411826 + | hypothetical protein SCO1335 1412625 - 1411885 - | oxidoreductase SCO1337 1415177 - 1414272 - | oxidoreductase SCO1336 1412774 - 1414348 + | lipoprotein N-acyltransferase (integral membrane) SCO1338 1416381 - 1415191 - | monooxygenase (secreted protein) SCO1339 1416484 - 1417104 + | hypothetical protein SCO1340 1417147 - 1417659 + | hypothetical protein SCO1341 1417763 - 1418269 + | lipoprotein TERM 308 1418298 - 1418271 - T 75 -15.6 -3.05384 | gap 1 CGTTCGGCCACTGAA CCCGGCCGTGCCA CGG TGAC-CGGCCGGG CGCCGGGCCGGGCCG SCO1342 1418868 - 1418317 - | hypothetical protein SCO1343 1419678 - 1418995 - | uracil-DNA glycosylase TERM 309 1419241 - 1419193 - G 77 -16 -3.24747 | opp_overlap 1419206 GCCCCACAGCACGAA CACCG-CGGGGTCGGTCCGGGCGG CCA CCGCGCGGATC-ACCGCGTCGGTG AACAGCTCCCAGCCG SCO1344 1421344 - 1419752 - | solute binding transport lipoprotein TERM 310 1421405 - 1421421 + r 72 -5.1 -4.33274 | CCACGCCCCCTGAAC CCCCT TCTGAAC AGGGG TTTTGATCATCTGGC TERM 311 1421467 - 1421521 + r 81 -18.6 -3.03441 | gap 1 ATCGTGCACCGGGTT CCGATACGCGGACACGGGCGCCGTT TTCGTC AACGGCGCCCGTGTCCGGGGG-CGA TCTTGAGGGGTCCTC fabG 1422308 - 1421547 - | 3-ketoacyl-(acyl-carrier-protein) reductase TERM 312 1421669 - 1421634 - G 71 -15.5 -3.16564 | CTCCGAGGTGAGGAA CTCGGCGGCGCCC-CCG ATGT CGGAGGGCAC-GCCGAG CCGGCCCAGCGGGTA SCO1346 1423113 - 1422352 - | 3-oxoacyl-(ACP) reductase SCO1347 1423379 - 1424143 + | secreted protein SCO1348 1424617 - 1424234 - | hypothetical protein SCO1349 1425369 - 1424614 - | hypothetical protein TERM 313 1425477 - 1425498 + H 74 -2.1 -4.70169 | gap 1, overlap 1425476 CGGCGAGACCGGCCC GGGC-CCGCG CCC CGCGGAGAGC TTTTCTTACGTATCC SCO1350 1425591 - 1426211 + | hypothetical protein TERM 314 1426507 - 1426523 + G 76 -15.1 -3.44051 | GGAGCGGCCGGAGAC GGGCGGG GGC CCCGCCC TTCTGCTGGTGGACG TERM 315 1429025 - 1428973 - g 71 -15.6 -3.1355 | gap 2, opp_overlap 1428972, overlap 1429018 1429019 CCGAGCCATACGGAA GACCGGCGCCCTCTCCCG-GCGC-GA CCT CCTGCGCACGGAGAAGAACGCCGGTC CTCCTTGAGGTCCGG SCO1351 1426295 - 1429033 + | large transcriptional regulator SCO1352 1430469 - 1429057 - | Xaa-Pro aminopeptidase II SCO1353 1430545 - 1431576 + | transcriptional regulator SCO1354 1432225 - 1431662 - | secreted protein SCO1355 1433899 - 1432286 - | secreted serine protease SCO1356 1434218 - 1434715 + | iron sulphur protein (secreted protein) SCO1357 1434718 - 1435179 + | hypothetical protein SCO1358 1436223 - 1435312 - | LysR family transcriptional regulator SCO1359 1436298 - 1437296 + | integral membrane protein SCO1360 1439097 - 1437760 - | GntR family transcriptional regulator SCO1361 1439133 - 1439819 + | hypothetical protein SCO1362 1440840 - 1439866 - | integral membrane protein SCO1363 1442030 - 1441026 - | integral membrane protein SCO1364 1442748 - 1442209 - | hypothetical protein SCO1365 1442967 - 1443134 + | hypothetical protein TERM 316 1443188 - 1443226 + T 100 -30.5 -3.40403 | overlap 1443192 GAACGTCCCCGTACG CGAAGGTGCCCCGCGGA TCCGC TCCGCGGGGCACCTTCG TTCTCGTCCGCACCG TERM 317 1443192 - 1443222 + T 100 -24.1 -3.47322 | overlap 1443188 GTCCCCGTACGCGAA GGTGCCCCGCGGA TCCGC TCCGCGGGGCACC TTCGTTCTCGTCCGC SCO1366 1443908 - 1443255 - | hypothetical protein TERM 318 1443294 - 1443318 + g 72 -13.6 -3.31792 | gap 1 GTACAGCTTCTTGCG GGCG-TCGCCG ATGA CGGCGAGCGCC TTCTCCCGCTGCTCC SCO1367 1444656 - 1443901 - | ABC transport system ATP-binding protein SCO1368 1445792 - 1444653 - | ABC transport system transmembrane protein TERM 319 1445853 - 1445910 + H 75 -13.9 -3.48063 | gap 1, overlap 1445838 1445903 CCGTCGCCGCCGGCC CCCCGCAGGCGCGT-CCGGCGCAGGAGG TCA CTTCCCGGGCCGGAAGGCGGCAGCCGGG TTGTAACTTTCGATG SCO1369 1445966 - 1447180 + | two component system histidine kinase SCO1370 1447177 - 1447812 + | two component system DNA binding response regulator SCO1371 1447950 - 1448759 + | oxidoreductase SCO1372 1449613 - 1448786 - | integral membrane protein SCO1373 1451212 - 1449695 - | hypothetical protein SCO1374 1451745 - 1452356 + | secreted protein SCO1375 1452656 - 1452859 + | hypothetical protein SCO1376 1453090 - 1454160 + | LacI family transcriptional regulator SCO1377 1454293 - 1454712 + | molibdenum binding protein TERM 320 1454757 - 1454723 - T 100 -26.4 -3.59262 | opp_overlap 1454716 1454713 CCTGAGACGCCGAAA GGCCCCGCCCGGACAC CGC GGGCCCGGGCGGGGCC TCCCTCACCTTCTTG SCO1378 1457665 - 1454780 - | glycine dehydrogenase TERM 321 1455760 - 1455809 + g 71 -14.9 -3.14344 | CGATCTTGGCGCGCA GGTCCTCGACGTCGATCTCGCCG TCCT CGGCGGTCTTGACGACGACGACC TTCATGCCGGCCATC TERM 322 1457472 - 1457501 + g 74 -11.3 -3.7282 | gap 1, overlap 1457469 ACCTCGGCCTCGGAG CGCGCGCCCGGCAG ATC CAGCCGGTCG-GCG TTCTTGATCACATCC TERM 323 1457996 - 1458009 + rH 70 -2.3 -4.51097 | overlap 1457962 1457961 1457997 TTCGAGTGGCCGACC GGGCA TTTG TGCCG TTTTGTAGTACTTAC SCO1380 1459822 - 1458383 - | DNA polymerase IV SCO1379 1458078 - 1458473 + | hypothetical protein SCO1381 1460573 - 1459887 - | hypothetical protein SCO1382 1461209 - 1460736 - | hypothetical protein SCO1383 1462033 - 1461293 - | hypothetical protein TERM 324 1461985 - 1462021 + g 76 -15.1 -3.35597 | gap 1, overlap 1461983 TCATCAGCCCACTGT CCGTGGCGGCGGCGCC TTGCCC GGCACCGCCGCT-CGG TGTTTGAAACATGGA SCO1384 1462881 - 1462078 - | hypothetical protein SCO1385 1463926 - 1463072 - | hypothetical protein SCO1386 1464264 - 1463932 - | integral membrane protein SCO1387 1465166 - 1464261 - | membrane associated protein SCO1388 1467761 - 1465266 - | mannose-1-phosphate guanyltransferase TERM 325 1467354 - 1467390 + g 89 -10.8 -4.48987 | GAATTCCAGCGGGTT GGGCACGCGCGTCA GACACACGG TGACGAGCGAGCCC TTTTCCTTGTGGAAG SCO1389 1468521 - 1467874 - | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyl-transferase TERM 326 1468581 - 1468545 - H 100 -24.6 -5.15969 | overlap 1468574 CCTCAACGCAAAAAA GCTCTGGCTCTCGGGC TGCAT GCCCAAGAGCCAGAGC TCTAAAAGGAGTTCG TERM 327 1469243 - 1469259 + H 70 -2.9 -4.4715 | overlap 1469245 GGGGAAGATCAGCCT GTTATCC CCG GGGTACC TTTTATCCGTTGAGC TERM 328 1469905 - 1469916 + H 74 -2.2 -4.7254 | CGCCTTACGGCTTCG CACG GACC TGTG TTTTTAGTAAACAGT TERM 329 1473924 - 1473944 + H 70 -9.7 -3.72695 | overlap 1473925 GCTTCCTTTGTACTC ACCCAAGAG ACT CTCTTGGGC TTTCCTCCGGGCGCT SCO1390 1474291 - 1474740 + | PTS system sugar phosphotransferase component IIA TERM 330 1476430 - 1476480 + G 73 -17.3 -2.62263 | AGCGTGCCGCGGCCG CCGCCCGGGCGGCGGACAGTGCC GAGGA GGCGCGCACCGCCGCGCAGGCGG TGCTGTCCGGCGAGT SCO1391 1474827 - 1476497 + | phosphoenolpyruvate-protein phosphotransferase TERM 331 1476524 - 1476568 + T 93 -22.2 -3.10715 | gap 1 GCCTGCTGCTCAGGC TGTGGTGCGGGGCGTTCCACC TTCG GGTGGGGCGCCCCGC-CCGCG TTCAGTGGTGGTGAC SCO1392 1477472 - 1476570 - | hypothetical protein TERM 332 1477548 - 1477587 + r 79 -18.5 -2.82516 | opp_overlap 1477532 GGCGTCGGGGCGGGC GCGGGGAGCCGGCCGCC GTGCGG GGCGGCCGGCTCGTCGG TGTGCTGGTCAGGAG SCO1393 1479572 - 1477596 - | acetoacetyl-CoA synthetase SCO1394 1479786 - 1482173 + | glycosyl hydrolase SCO1395 1482580 - 1482164 - | mutT-like protein SCO1396 1483572 - 1482748 - | D-alanyl-D-alanine dipeptidase (putative secreted protein) SCO1397 1483776 - 1484795 + | hypothetical protein SCO1398 1484800 - 1485507 + | hypothetical protein TERM 333 1485619 - 1485578 - T 79 -16.4 -3.41602 | overlap 1485548 CTCAGGTCAGGACAA CCCGGCGCCGGGCCCCTC AGGTCA GGACGGCCCGGCGGCGGG GCCTTCAAGTCGGGA SCO1399 1486289 - 1485684 - | ATP/GTP-binding protein SCO1400 1486734 - 1486339 - | hypothetical protein SCO1401 1487179 - 1486745 - | hypothetical protein SCO1402 1490007 - 1487176 - | large secreted protein SCO1403 1490427 - 1490969 + | hypothetical protein TERM 334 1490970 - 1491011 + T 70 -13.7 -3.19642 | overlap 1490956 CTGTCGCATCCCTGA GCGGCGG-GGCGGTGGGCG CCCGGC CGCTC-CGGCCTCCGCCGC TTGCTCACTCCTCGT SCO1404 1494021 - 1491016 - | hypothetical protein SCO1405 1495871 - 1494024 - | HSP90 family protein SCO1406 1496950 - 1495964 - | hypothetical protein SCO1407 1501717 - 1497056 - | hypothetical protein TERM 335 1498639 - 1498658 + g 76 -15 -3.41051 | CCTGTTCGGCGCGCA GGTCGGCG CCGA CGCCGACC TTCTCGTACACCTGG TERM 336 1501569 - 1501537 - G 71 -14.8 -3.13403 | gap 1, overlap 1501535 CGTTCTCGAGGAAGA GCACACCG-GCCGGC GCGG GCCGGCGCGGCGGGC CGACGGGCTCCTCCT SCO1408 1502704 - 1501823 - | membrane protein SCO1409 1504319 - 1502793 - | membrane protein SCO1410 1505123 - 1504428 - | GntR family transcriptional regulator SCO1411 1505261 - 1506583 + | transmembrane transport protein SCO1412 1506580 - 1507413 + | hypothetical protein SCO1413 1509278 - 1507860 - | hypothetical protein TERM 337 1509607 - 1509575 - R 90 -9.8 -4.82901 | overlap 1509576 CCCTGGTCAGAAAAA TGTGGAGCAGGTCC GGACA GGACCCTCTCCACC GCCCCGTCACCGGGC TERM 338 1509606 - 1509576 - R 72 -13.3 -3.49419 | overlap 1509575 CCTGGTCAGAAAAAT GTGGAGCAGGTCC GGACA GGACCCTCTCCAC CGCCCCGTCACCGGG SCO1414 1510018 - 1509614 - | ankyrin-like protein SCO1415 1510276 - 1510470 + | membrane protein SCO1416 1510524 - 1512272 + | membrane protein TERM 339 1512618 - 1512576 - T 70 -12.8 -3.33696 | gap 2 GGGCGGGCGAACGAA CGAGGG--CTCCGCCCGC CCGGACTTC GCGGGCGGAGGTCCCCCG GCGGCCCCGCCGGAC SCO1417 1514141 - 1512639 - | GntR family regulatory protein SCO1418 1514244 - 1514936 + | integral membrane protein SCO1419 1514933 - 1515700 + | phosphodiesterase SCO1420 1515752 - 1517212 + | integral membrane protein SCO1421 1517384 - 1517758 + | hypothetical protein TERM 340 1517792 - 1517831 + T 100 -28.1 -4.46926 | opp_overlap 1517792 ACAACCGAACAAAAA CCGCGGGTGCCGTACAT AGCTTC ATGTACGGCACCCGCGG TTTTGTCGTGCCGTG TERM 341 1517831 - 1517792 - T 100 -28.8 -5.14645 | opp_overlap 1517792 ACAACCGAACAAAAA CCGCGGGTGCCGTACATA GCTT CATGTACGGCACCCGCGG TTTTGTCGTGCCGTG SCO1422 1518445 - 1517861 - | membrane protein SCO1423 1519400 - 1518492 - | glycosyl transferase SCO1424 1521536 - 1519926 - | hypothetical protein SCO1425 1522117 - 1521620 - | transcription regulator AsnC SCO1426 1522328 - 1522765 + | hypothetical protein SCO1427 1522938 - 1523255 + | hypothetical protein SCO1428 1524393 - 1523218 - | acyl-CoA dehydrogenase SCO1429 1524785 - 1526038 + | chitinase (secreted protein) TERM 342 1526065 - 1526094 + T 93 -21.5 -3.15861 | CGTACGGGGGGCGAA GGGGCGGGAACCT GCTC GGGTTCCCGCCCC TTCGTCGGCGTCGTC SCO1430 1526779 - 1526117 - | TetR family transcriptional regulator SCO1431 1527104 - 1526862 - | membrane protein TERM 343 1527045 - 1527080 + g 85 -14.7 -4.07568 | overlap 1527046 1527079 GCTCGGCGGAGTCCC CCCGCTCACGGTGTC CACCTT GCCACCGTGAGCGGC TTTTGCGGCCGAGAG TERM 344 1527046 - 1527079 + g 77 -18.2 -3.04398 | overlap 1527045 CTCGGCGGAGTCCCC CCGCTCACGGTGTC CACCTT GCCACCGTGAGCGG CTTTTGCGGCCGAGA SCO1432 1528564 - 1527125 - | membrane protein SCO1433 1528839 - 1529303 + | hypothetical protein TERM 345 1529436 - 1529473 + F 73 -14.2 -3.32844 | opp_overlap 1529434, overlap 1529452 AGCCGCCGACAGACG CGAAGCCCCCGGTTGT TCCCCC GTGATCGGGGGCTTCG TTCTGCCCTGAGCGC SCO1434 1529751 - 1531607 + | CbxX/CfqX family protein SCO1435 1532835 - 1531792 - | integral membrane protein SCO1436 1534163 - 1532832 - | secreted protein SCO1437 1534838 - 1534368 - | hypothetical protein hisG 1535733 - 1534876 - | ATP phosphoribosyltransferase hisE 1536054 - 1535782 - | phosphoribosyl-ATP pyrophosphatase ribH 1536574 - 1536089 - | riboflavin synthase subunit beta SCO1441 1537885 - 1536596 - | bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein SCO1442 1538526 - 1537882 - | integral membrane protein SCO1443 1539125 - 1538523 - | riboflavin synthase subunit alpha TERM 346 1539828 - 1539854 + G 74 -18 -2.71364 | opp_overlap 1539824 1539821 1539823 AGGGAGAAGATGGGC GCCGACCACCCG CGC CGGGTGATCGGC TACTTCACGAGCTGG SCO1444 1539609 - 1541984 + | chitinase precursor SCO1445 1542226 - 1542993 + | hypothetical protein SCO1446 1543064 - 1543432 + | integral membrane protein SCO1447 1544653 - 1543454 - | transcriptional regulator TERM 347 1543760 - 1543724 - G 71 -15 -3.14344 | GAGCGCGTCGAGGAA CCGCTCGGCGGCGGGG TCGCT CCCGGACGCCGACCGG CGTACCGCCTCCCGG SCO1448 1544766 - 1545977 + | transport protein SCO1449 1546395 - 1545937 - | hypothetical protein SCO1450 1546564 - 1548000 + | uracyl permease SCO1451 1549133 - 1547982 - | endoglucanase precursor SCO1452 1549307 - 1550002 + | hypothetical protein SCO1453 1550134 - 1551066 + | hypothetical protein TERM 348 1551085 - 1551045 - T 79 -15.9 -3.40403 | CCTCGTCCACGAGAA GGCCAGGGCGGCCGGAGTC TAG GCCCCCGGCCGGACAGGCC CTAGTCCTCGGGGAG SCO1454 1552783 - 1551086 - | amino oxidase SCO1455 1553636 - 1552848 - | hydrolase SCO1456 1554174 - 1553815 - | hypothetical protein SCO1457 1555507 - 1554266 - | transport protein TERM 349 1555161 - 1555123 - G 83 -21.6 -2.62184 | GTTCGTCGTAGACCA GCGCCTCCAGCGCGCCCG AGC CGAGCGCGCCGCCGGCGC CCCACAGCACGAAGC SCO1458 1556108 - 1555656 - | transcription regulator AsnC SCO1459 1557614 - 1556124 - | amino acid transporter TERM 350 1557742 - 1557717 - R 70 -13.3 -3.28712 | gap 1 CGCGCTCGTGCAGAA CGGGGA-CCCAC CGA GCGGGGTCCCCG CCACGCCACGTACAG SCO1460 1558307 - 1557912 - | hypothetical protein SCO1461 1559831 - 1558380 - | inositol-5-monophosphate dehydrogenase SCO1462 1560284 - 1559931 - | hypothetical protein SCO1463 1561432 - 1560350 - | transcriptional regulator TERM 351 1561309 - 1561289 - G 72 -13.9 -3.35679 | GCCCTCGAGGTAGAA GCGGCGGGC CAT GGCCGCCGC CTGGACCAGCTCAGC SCO1464 1562157 - 1561471 - | ribulose-phosphate 3-epimerase SCO1465 1563520 - 1562315 - | secreted protein SCO1466 1564455 - 1563517 - | integral membrane protein SCO1467 1565927 - 1564452 - | hypothetical protein TERM 352 1564772 - 1564809 + g 70 -16.9 -2.78816 | overlap 1564769 TGGCGTGGGCGAGCC GCACGGCCCGGCCGAGC TGCT GTTCGGCCAGGTCGCGC TGTCCTCGGCGGTGG SCO1468 1568310 - 1565986 - | serine/threonine protein kinase TERM 353 1568366 - 1568398 + r 70 -13.3 -3.40299 | CCGCTCATGCCGCGG GCTCCCCGTGCGGCC GCG GGTCGCGCCGGGACC TTCTCGGTGTCATGA SCO1469 1570513 - 1568408 - | hypothetical protein SCO1470 1570514 - 1570885 + | hypothetical protein SCO1471 1570932 - 1571951 + | transposase SCO1472 1573398 - 1571971 - | putative Sun-family protein fmt 1574419 - 1573487 - | methionyl-tRNA formyltransferase TERM 354 1574695 - 1574674 - H 70 -15.1 -2.92449 | opp_overlap 1574670 1574674 1574675, overlap 1574665 1574663 GAAAGAGTTGACACA CCGGGCCGC CCGC GCGGCCCGA TTCCTTTCAACGCCG TERM 355 1574674 - 1574695 + H 72 -12.9 -3.51232 | opp_overlap 1574674 1574665 1574663, overlap 1574670 1574675 GAAAGAGTTGACACA CCGGGCCGC CCGC GCGGCCCGA TTCCTTTCAACGCCG TERM 356 1574675 - 1574694 + H 72 -16.4 -2.70525 | opp_overlap 1574674 1574665 1574663, overlap 1574674 1574670 AAAGAGTTGACACAC CGGGCCGC CCGC GCGGCCCG ATTCCTTTCAACGCC SCO1474 1574728 - 1575279 + | hypothetical protein SCO1475 1577602 - 1575452 - | primosome assembly protein PriA TERM 357 1577697 - 1577651 - R 100 -33.8 -3.01712 | opp_overlap 1577672, overlap 1577635 1577653 GCCGGGGTCGGAACA GATGGCGAGGCCCGGCGCCCCC TCG GGGAGCGCCGGGCCTCGTCACC TGCCGTGGGGCGCGG TERM 358 1577695 - 1577653 - R 100 -32.8 -3.06696 | opp_overlap 1577672, overlap 1577635 1577651 CGGGGTCGGAACAGA TGGCGAGGCCCGGCGCCCCC TCG GGGAGCGCCGGGCCTCGTCA CCTGCCGTGGGGCGC SCO1476 1578935 - 1577727 - | S-adenosylmethionine synthetase SCO1477 1580458 - 1579175 - | bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase TERM 359 1579957 - 1579979 + g 70 -12.6 -3.4252 | CGATCACTACGGCGC CGCGGCGGCG CAG TGCCGCCACG TTCTCCTGGGTGGCC TERM 360 1580499 - 1580465 - R 93 -23.7 -2.95476 | ACGACCCATCACACA CCACAGGCCCGACAG TCGGG CTGCCGGGCCTGTGG ATAAGTCAGCGCAAG SCO1478 1580818 - 1580546 - | DNA-directed RNA polymerase subunit omega SCO1479 1581474 - 1580881 - | guanylate kinase SCO1480 1581835 - 1581512 - | hypothetical protein SCO1481 1582895 - 1582059 - | orotidine 5'-phosphate decarboxylase SCO1482 1584007 - 1582901 - | dihydroorotate dehydrogenase 2 TERM 361 1584096 - 1584067 - R 100 -23.7 -3.14132 | GCTGGGGCTCATGAA GAGGGGGACACCG TTTC CGGTGTCCCCCTC GGGGCCGCTAGTCGC carB 1587412 - 1584104 - | carbamoyl phosphate synthase large subunit TERM 362 1586129 - 1586183 + g 71 -10.7 -3.78934 | gap 1 GGGCCGCACGGCCTC GCGCAGC-AGCTCATCCTTGTCGCCG GGCT CGCCGACGAAGGTGAACTGGCTGCCC TTCTTCTCCAGCGAG SCO1484 1588547 - 1587405 - | carbamoyl phosphate synthase small subunit TERM 363 1587878 - 1587855 - G 71 -10.3 -3.78934 | overlap 1587857 GCCGTTGGAGAAGAA CACGCCGTC CGGCTC GACGGCGTA GACGTCGTCGACCGT SCO1485 1589119 - 1588544 - | integral membrane protein pyrC 1590402 - 1589116 - | dihydroorotase pyrB 1591387 - 1590407 - | aspartate carbamoyltransferase catalytic subunit TERM 364 1591248 - 1591279 + g 71 -5 -4.24342 | overlap 1591244 1591249 TCCTCGAAGAAGAGG TTGACGACGGTGCG GCCG CGCAGGGTCGGCAG TTTCTTGATCGGCCG SCO1488 1592083 - 1591502 - | pyrimidine regulatory protein PyrR SCO1489 1592381 - 1592884 + | DNA-binding protein TERM 365 1592962 - 1592907 - T 100 -32.6 -3.9712 | opp_overlap 1592910, overlap 1592908 CCACCTCAGCAGAAA CGTGCCGCCGGGGTGGCCGGAACCGT TCGT ACGGTCCCGGCCACCCCGGCGGCTTT TACCCGTCGTAGGCT TERM 366 1592961 - 1592908 - T 100 -36.1 -2.97951 | opp_overlap 1592910, overlap 1592907 CACCTCAGCAGAAAC GTGCCGCCGGGGTGGCCGGAACCGT TCGT ACGGTCCCGGCCACCCCGGCGGCTT TTACCCGTCGTAGGC TERM 367 1592910 - 1592959 + T 100 -40.9 -4.12188 | opp_overlap 1592908 1592907 CCTCAGCAGAAACGT GCCGCCGGGGTGGCCGGAACCGT TCGT ACGGTCCCGGCCACCCCGGCGGC TTTTACCCGTCGTAG nusB 1593516 - 1593088 - | transcription antitermination protein NusB SCO1491 1594085 - 1593519 - | elongation factor P SCO1492 1595256 - 1594150 - | peptidase SCO1493 1596323 - 1595436 - | secreted protein aroB 1597581 - 1596490 - | 3-dehydroquinate synthase SCO1495 1598093 - 1597578 - | shikimate kinase I SCO1496 1599274 - 1598090 - | chorismate synthase SCO1497 1599845 - 1599480 - | integral membrane protein SCO1498 1600661 - 1599894 - | shikimate 5-dehydrogenase SCO1499 1602462 - 1600714 - | integral membrane protein SCO1500 1603094 - 1602591 - | hypothetical protein TERM 368 1603031 - 1603077 + g 90 -21.6 -3.30441 | gap 1, overlap 1603052 CGTCGCCGACGTCGA CGGCCAGGCGG-CGGCCGCGG CGCATC CTGGGGCCGTCCGCCTGGTCG TTCTCGGGCGTGCTC alaS 1605763 - 1603091 - | alanyl-tRNA synthetase SCO1502 1606119 - 1605763 - | secreted protein SCO1503 1606576 - 1606127 - | secreted protein SCO1504 1606679 - 1608931 + | regulator rpsD 1609590 - 1608976 - | 30S ribosomal protein S4 SCO1506 1611240 - 1609885 - | recombination factor protein RarA TERM 369 1611312 - 1611256 - R 95 -19.4 -3.66178 | overlap 1611271 GCCTTGAACCCTAAA TGACCGCACCGACAACGCGG-CGGGCCC GGT GGGCCCGCCCGCGCGGAAGGC-CGGTCA GCTGGTCCAGAAGTC TERM 370 1611298 - 1611271 - R 91 -20.6 -3.36327 | gap 1, overlap 1611256 TGACCGCACCGACAA CGCGG-CGGGCCC GGT GGGCCCGCCCGCG CGGAAGGCCGGTCAG SCO1507 1612032 - 1611310 - | integral membrane protein hisS 1613443 - 1612166 - | histidyl-tRNA synthetase SCO1509 1614147 - 1613440 - | hydrolase SCO1510 1614331 - 1615164 + | peptidyl-prolyl cis-trans isomerase SCO1511 1615300 - 1616367 + | hypothetical protein SCO1512 1616388 - 1616528 + | hypothetical protein TERM 371 1616545 - 1616585 + T 100 -29.9 -2.89191 | opp_overlap 1616508 1616548 1616550 GTAGCCGACCGGACA CGAGAGGTGCTCCCGTACG GTG CGTACGGGAGCCCCTCTCG TGTGTGCGCCTGTGC TERM 372 1616582 - 1616548 - T 95 -24.4 -2.63596 | opp_overlap 1616545, overlap 1616508 1616550 GCCGACCGGACACGA GAGGTGCTCCCGTACG GTG CGTACGGGAGCCCCTC TCGTGTGTGCGCCTG TERM 373 1616580 - 1616550 - T 90 -21.2 -2.85999 | opp_overlap 1616545, overlap 1616548 CGACCGGACACGAGA GGTGCTCCCGTACG GTG CGTACGGGAGCCCC TCTCGTGTGTGCGCC SCO1513 1619150 - 1616607 - | GTP pyrophosphokinase TERM 374 1618342 - 1618371 + g 71 -9.3 -3.86935 | gap 1 AGGCGATGGGCGAGC GGCGCGT-AGATCT CCA GGGTCTCGCGCGCC TTCTTCTCCTGCTTC TERM 375 1618791 - 1618845 + g 83 -17.8 -3.33261 | overlap 1618784 GCGCAGGGTCGACGT CTCGATCTTCGGGTCGTTGCCGCGCA CTA TGCGCAGCAGCGGCTCCAGGACCGGG TTGTACGGGTTGGCG SCO1514 1619831 - 1619334 - | adenine phosphoribosyltransferase secF 1621000 - 1619879 - | preprotein translocase subunit SecF secD 1622716 - 1621004 - | preprotein translocase subunit SecD TERM 376 1621949 - 1621991 + g 77 -16.3 -3.31144 | gap 1, overlap 1621951 1621953 GACGGCCTCGGCCTC GT-CGACCTCGGTGCCGTCG ACCG CGGCGGCGCCGAGGATGTAC TTCTGCCACTGGCCC TERM 377 1621951 - 1621988 + g 79 -19.1 -2.83271 | overlap 1621949 1621953 CGGCCTCGGCCTCGT CGACCTCGGTGCCGTCG ACCG CGGCGGCGCCGAGGATG TACTTCTGCCACTGG TERM 378 1621953 - 1621986 + g 77 -18.1 -2.96452 | overlap 1621951 1621949 GCCTCGGCCTCGTCG ACCTCGGTGCCGTCG ACCG CGGCGGCGCCGAGGA TGTACTTCTGCCACT TERM 379 1622757 - 1622789 + r 71 -9 -4.10717 | overlap 1622758 ATCAGGATCAGGGCC AGCGAGCGCCCGGG CTTAC TCTGAGCGCTCGCA TTCTTTCCCTTTTTA TERM 380 1622899 - 1622950 + r 100 -22.3 -3.35813 | gap 1 GGATCCGTGCGAGCC GCGCGTCACGCGGGGTGCGCGGGA ACCCG TCCCGCGCACCCCGGGGCACG-GC TTACTTCGCCTCGGA SCO1517 1623460 - 1622951 - | secreted protein ruvB 1624709 - 1623636 - | Holliday junction DNA helicase B TERM 381 1624639 - 1624690 + g 70 -16.5 -2.66435 | overlap 1624646 1624652 TCCACGGCCTGGTCC TCGCCGTCGGCGGCCGC-GCCGACC AGCC GCTCGGCGGCGGCCTCCG-CGTCGG TCGTGTCGTCCCAGT SCO1519 1625361 - 1624756 - | holliday junction DNA helicase ruvC 1625924 - 1625358 - | Holliday junction resolvase TERM 382 1626021 - 1625983 - R 86 -15.2 -3.91897 | opp_overlap 1625989, overlap 1625984 1625987 GGTGCCACCGACAAA GCGACGGGCCGACGGG TCGTGTC CCCGTCGGCCCGCTGA GCAGGGACGCGTTAC TERM 383 1626020 - 1625984 - R 84 -18.7 -2.94924 | opp_overlap 1625989, overlap 1625983 1625987 GTGCCACCGACAAAG CGACGGGCCGACGGG TCGTGTC CCCGTCGGCCCGCTG AGCAGGGACGCGTTA TERM 384 1626017 - 1625987 - R 90 -21.2 -2.71325 | opp_overlap 1625989, overlap 1625984 1625983 CCACCGACAAAGCGA CGGGCCGACGGG TCGTGTC CCCGTCGGCCCG CTGAGCAGGGACGCG SCO1521 1626785 - 1626033 - | hypothetical protein SCO1522 1627443 - 1626835 - | glutamine amidotransferase subunit PdxT SCO1523 1628367 - 1627456 - | pyridoxine biosynthesis protein SCO1524 1629021 - 1628479 - | hypothetical protein SCO1525 1630244 - 1629081 - | sugar transferase SCO1526 1631176 - 1630241 - | lipid A biosynthesis lauroyl acyltransferase SCO1527 1631898 - 1631173 - | membrane transferase TERM 385 1632423 - 1632456 + G 77 -16.8 -3.24747 | gap 1 CTTCGTCGGCGAGCT GAGGGCCG-GTCTGC GCGCG GCGGACGCGGCCCTC TTCGTCGTCTCGGCC SCO1528 1632106 - 1634304 + | elongation factor G TERM 386 1634412 - 1634449 + F 72 -12.6 -3.57462 | gap 1 GCCCCGGCGTACGAC GGCGCGCCCG-GCGGTC AACCC GGGCGCGCGGGGGCGCC TTTGGCCGTCCCGTG SCO1529 1634572 - 1636227 + | hypothetical protein SCO1530 1636876 - 1636316 - | hypothetical protein TERM 387 1636941 - 1636914 - R 95 -19.2 -3.66178 | gap 1, overlap 1636916 GCTGGGAAGCTGAAA GAGCCCCCGGGAG CTC CTCCCGGGGGC-C GATCACCGCGATCGC TERM 388 1636940 - 1636916 - R 100 -22.9 -3.41222 | overlap 1636914 TGGGAAGCTGAAAGA GCCCCCGGGAG CTC CTCCCGGGGGC CGATCACCGCGATCG thrS 1638942 - 1636966 - | threonyl-tRNA synthetase SCO1532 1640408 - 1639131 - | hypothetical protein SCO1533 1640971 - 1640405 - | hypothetical protein SCO1534 1641143 - 1641868 + | DNA polymerase III subunit epsilon TERM 389 1641910 - 1641935 + T 87 -20.5 -3.03124 | opp_overlap 1641910 CCGGAACACGAAGAA GCCGGTCCGTC GTGG GACGGACCGGC TCTTCCCGGGTGGGC TERM 390 1641935 - 1641910 - T 100 -20.5 -3.82084 | opp_overlap 1641910 CCGGAACACGAAGAA GCCGGTCCGTC GTGG GACGGACCGGC TCTTCCCGGGTGGGC SCO1535 1642515 - 1642057 - | hypothetical protein SCO1536 1645023 - 1642555 - | hypothetical protein SCO1537 1646910 - 1645999 - | transport system membrane protein SCO1538 1647893 - 1646907 - | transport system membrane protein SCO1539 1649206 - 1647905 - | lipoprotein TERM 391 1649550 - 1649517 - R 100 -29.7 -2.85351 | GCGGCGCACACGAGA GGCGGCCCGGCTCAC GATC GTGAGCCGGGCCGCC TGATGATCCGGTGGG SCO1540 1650185 - 1649733 - | hypothetical protein TERM 392 1650061 - 1650035 - G 75 -6.6 -4.30576 | gap 1 GGCCGACGACGAAAA CGCCG-ACCTG CCAGCT CAGGTGCAGCG CACGACGCGCCTTGA SCO1541 1650311 - 1650790 + | regulator TERM 393 1650911 - 1650871 - f 95 -23.9 -2.90763 | CGCATACGGCACACA CCGGCGTCGTCGCCGCGGA TCT TCCGCGGGGGCGGCGCCGG TGCGTGCGCGGCGCC SCO1542 1651070 - 1651630 + | hypothetical protein SCO1543 1652535 - 1652074 - | hypothetical protein SCO1544 1652664 - 1653251 + | hypothetical protein SCO1545 1654167 - 1653340 - | acetyltransferase SCO1546 1655116 - 1654295 - | aminotransferase SCO1547 1656174 - 1655113 - | anthranilate synthase TERM 394 1656858 - 1656822 - R 100 -31.7 -3.1247 | opp_overlap 1656826, overlap 1656826 ATCGTCCACACTCAA CGAAGCCCCCGGCCGCC TCG AGCGGCCGGGGGCTTCG TCGTGGGCGGCTCAG TERM 395 1656854 - 1656826 - R 100 -25.3 -3.39142 | opp_overlap 1656826, overlap 1656822 TCCACACTCAACGAA GCCCCCGGCCGCC TCG AGCGGCCGGGGGC TTCGTCGTGGGCGGC TERM 396 1656826 - 1656854 + r 100 -24.6 -3.21099 | opp_overlap 1656826 1656822 TCCACACTCAACGAA GCCCCCGGCCGC CTCGA GCGGCCGGGGGC TTCGTCGTGGGCGGC SCO1548 1657130 - 1656870 - | hypothetical protein SCO1549 1658197 - 1657259 - | hypothetical protein TERM 397 1658304 - 1658267 - R 100 -18.5 -4.18018 | opp_overlap 1658271, overlap 1658271 CCCGGGGAGGGAAAA GCAATGCCGGCGCAGCT CCCC AGCTGCGCCGGCATTTT GCCGTCCGCCGCACC TERM 398 1658271 - 1658300 + r 100 -23.7 -4.13767 | opp_overlap 1658271 1658267 GGGAGGGAAAAGCAA TGCCGGCGCAGCT CCCC AGCTGCGCCGGCA TTTTGCCGTCCGCCG TERM 399 1658300 - 1658271 - R 100 -23.7 -3.69605 | opp_overlap 1658271, overlap 1658267 GGGAGGGAAAAGCAA TGCCGGCGCAGCT CCCC AGCTGCGCCGGCA TTTTGCCGTCCGCCG TERM 400 1658319 - 1658334 + r 73 -10.4 -3.767 | TGCCGTCCGCCGCAC CCCCGT CCCC ACGGGG TTTCATGGATGGATG SCO1550 1658571 - 1658389 - | small membrane protein SCO1551 1659144 - 1660625 + | protein kinase SCO1552 1661471 - 1660653 - | rRNA methylase SCO1553 1662705 - 1661473 - | uroporphyrin-III methyltransferase TERM 401 1662835 - 1662892 + r 77 -16.7 -2.8474 | overlap 1662836 1662837 GACGGGGCTGCGGGC ACGGGAGTCCCCCGCGGGGTCCGGCAC CGTG GTGCCGGGCCCCGCGTCGTGCGACCGC TACTTCTCGGTGACG SCO1554 1666530 - 1662892 - | nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase TERM 402 1664372 - 1664403 + g 70 -13.8 -3.18264 | gap 1, overlap 1664373 CCCTTGGGCAGCGAC TTGGCGTACGCGTCG CGC TGACGCGT-CGCCAG TTCGTGCATGGCGCG TERM 403 1666775 - 1666788 + r 75 -5.2 -4.57569 | opp_overlap 1666769 CGTACCACACCCGCC CCCG AAGGAA CGGG TTTTTACGGACATCG SCO1555 1668129 - 1666903 - | methyltransferase SCO1556 1668945 - 1668247 - | acetyltransferase TERM 404 1669006 - 1668958 - R 100 -33.4 -3.17054 | gap 1 CATGAAAGCACTCAA CCACACCACCGGGTCCGCCCCGT GTGC ACGGAGCGGACCCGGTGG-GTGG CGCGGGGTGAGGCCC SCO1557 1669883 - 1669056 - | lipoprotein SCO1558 1670672 - 1669950 - | ABC transporter permease protein SCO1559 1671790 - 1670684 - | ABC transporter ATP-binding protein TERM 405 1670734 - 1670712 - G 71 -14.8 -3.09516 | opp_overlap 1670711 1670709 TCCTTCACCAGCGAA GCGGACGCGG TGG CCGCGTCCGG CGTCTCGTTCACCAC TERM 406 1671755 - 1671796 + g 71 -7.8 -3.97139 | overlap 1671756 GTGGGTTTCCGTCAC TGTCGAGTGCGCGGCGCG GTGGTG TGCGCCGGGCACGGGGCG TTGTTCTTCGGGTTC SCO1560 1672816 - 1672166 - | phosphatase TERM 407 1672591 - 1672541 - G 71 -14.8 -3.14344 | gap 3 GAGCGCGTCGAGGAA GTCGCGG--GTGCCGGGCAGCAGGC GCAC GCCC-CCGCCCGGCACGTCCTCGAC CTCCAGCTGTTCGAT SCO1561 1672877 - 1673236 + | integral membrane protein SCO1562 1673238 - 1673654 + | integral membrane protein SCO1563 1674203 - 1673718 - | acetyltransferase SCO1564 1674773 - 1674273 - | RNA polymerase sigma factor SCO1565 1676026 - 1674848 - | glycerophosphoryl diester phosphodiesterase TERM 408 1676557 - 1676575 + G 71 -10.3 -3.71848 | GGTGATCATGCCCCT GACCTGC GACCG GCAGGTC TTCTTCATCGGCAAG SCO1566 1676402 - 1677073 + | acyltransferase SCO1567 1678681 - 1677149 - | transmembrane-transport protein SCO1568 1679247 - 1678678 - | TetR family transcriptional regulator SCO1569 1680387 - 1679335 - | oxidoreductase SCO1570 1681859 - 1680432 - | argininosuccinate lyase SCO1571 1681979 - 1682566 + | hypothetical protein SCO1572 1682570 - 1683286 + | secreted protein SCO1573 1683419 - 1684756 + | oxidoreductase membrane protein TERM 409 1684890 - 1684868 - f 81 -16.2 -3.53012 | CTGCTGTCGCTGAAA CCGGCGTCCG ACC CGGGCGCCGG CTCGGCGGCGGGCGG SCO1574 1684919 - 1685587 + | hypothetical protein SCO1575 1685643 - 1686383 + | thiamine biosynthesis lipoprotein precursor SCO1576 1687155 - 1686616 - | arginine repressor argD 1688371 - 1687163 - | acetylornithine aminotransferase SCO1578 1689288 - 1688368 - | acetylglutamate kinase argJ 1690436 - 1689285 - | bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein argC 1691461 - 1690433 - | N-acetyl-gamma-glutamyl-phosphate reductase TERM 410 1691077 - 1691028 - G 71 -15 -3.14132 | GCCGTGGGGTAGCAA CCGGGCA-CCGCGATGCGCTTGGA CCCC TCCA-GCGCGGCGCGGGCACCCGG AAGTTCGGGGAGGCC SCO1581 1691495 - 1692058 + | hypothetical protein SCO1582 1692572 - 1692048 - | ATP/GTP binding protein SCO1583 1695109 - 1692635 - | secreted arabinosidase SCO1584 1695246 - 1695704 + | hypothetical protein SCO1585 1696287 - 1695667 - | hypothetical protein SCO1586 1696801 - 1696361 - | hypothetical protein SCO1587 1698298 - 1696856 - | transcriptional regulator TERM 411 1697079 - 1697058 - G 72 -12.3 -3.59979 | gap 1 CCCCCGGAGCCGAAA GC-CTGGGGG GTG CCCCCAGTGC CCCCAGTGCCCTCGG SCO1588 1698333 - 1699295 + | integral membrane protein SCO1589 1699336 - 1699530 + | hypothetical protein TERM 412 1699531 - 1699587 + T 86 -20 -2.82516 | gap 1 GAGACCCAGCTGTAG CCCGG-CGGCCGCACCCCCGCGCCGGA GCGG TTCAGCGCGGGGCGGCGGCCGGCTGCG TGTAGTGGTCGGCGG SCO1590 1700806 - 1699562 - | secreted protein SCO1591 1700944 - 1701855 + | 3-hydroxybutyryl-CoA dehydrogenase SCO1592 1702388 - 1701846 - | hypothetical protein TERM 413 1701915 - 1701891 - G 77 -17.1 -3.23216 | GTGCAGCAGGAGTAA CGCGGCCGCCA TGT TGGCGGCCGGG ACCTCCCCGCGGGCG SCO1593 1703856 - 1702516 - | transcriptional regulator TERM 414 1704246 - 1704200 - R 100 -8.5 -5.40072 | gap 1, overlap 1704201 1704202 GCGCCCCTAAAAAAA GGGGC-GCGGGGAACTGCGCGA GCGA CCACGACGTACCCCGCAGCCGC CGAACCGGCAGGAAC pheT 1706806 - 1704284 - | phenylalanyl-tRNA synthetase subunit beta pheS 1707882 - 1706806 - | phenylalanyl-tRNA synthetase subunit alpha SCO1596 1709248 - 1708109 - | two-component sensor TERM 415 1708402 - 1708418 + g 71 -7.9 -4.08692 | overlap 1708403 TGGTGACGGTTCCCT CGCCGTG CCG CACGGCA TTTTCCAGCAGGTTG SCO1597 1710147 - 1709299 - | rRNA methylase TERM 416 1710313 - 1710261 - R 100 -31.5 -3.72087 | opp_overlap 1710276 ACGAACCGAACACAA CGGCAACCGAAGGGACCCGCAGGCT CAC AGCCTGCGGGTCCCTTCGACTACGG CTCAAGCCGGCGCAG TERM 417 1710276 - 1710298 + r 81 -19.2 -2.53876 | opp_overlap 1710261 CGGCAACCGAAGGGA CCCGCAGGCT CAC AGCCTGCGGG TCCCTTCGACTACGG rplT 1710714 - 1710331 - | 50S ribosomal protein L20 rpmI 1711006 - 1710812 - | 50S ribosomal protein L35 infC 1711774 - 1711121 - | translation initiation factor IF-3 TERM 418 1711891 - 1711866 - H 91 -2.3 -5.24129 | overlap 1711846 1711867 1711883 CCGGCGCACAAAAAA TGCCCCGGACG ATCA CAGGCGGGGCT CCTCGAACTGCTACC SCO1601 1712158 - 1712523 + | hypothetical protein SCO1602 1713279 - 1712548 - | hypothetical protein SCO1603 1713855 - 1715099 + | transposase SCO1604 1715678 - 1715151 - | hypothetical protein SCO1605 1715196 - 1715549 + | hypothetical protein TERM 419 1715807 - 1715860 + FH 78 -8.7 -4.37092 | gap 1, overlap 1715799 1715854 CTTGACTTCTTAGCC CCCTGAGATGTCTAT-CGGGGCACCG GTA CGGCGCTCCTCACCGGCCTCTCAGGG TTTTCTGACCCGAGT SCO1606 1715926 - 1716894 + | hypothetical protein SCO1607 1718090 - 1716909 - | serine protease membrane protein SCO1608 1718800 - 1718087 - | hypothetical protein TERM 420 1719524 - 1719500 - H 73 -15.7 -2.90496 | overlap 1719497 1719504 TGCCGCCGTAAACGA GACATCCGGGC CCG GCCCGGACGCC GGGCGGGGCGCGGCC TERM 421 1719538 - 1719504 - H 81 -18.4 -3.05769 | overlap 1719500 1719497 GCCGTAAACGAGACA TCCGGGCCCGGCCCGG ACG CCGGGCGGGGCGCGGC CTGGGCACCGGCCGA TERM 422 1719975 - 1719987 + H 73 -10.5 -3.85698 | CACCCCCCGTTTCCC CGGGC CCG GCCCG TTTCTCCGACACGGG SCO1609 1720261 - 1721469 + | hypothetical protein SCO1610 1722461 - 1721502 - | hypothetical protein TERM 423 1722258 - 1722209 - G 71 -14.9 -3.17051 | gap 1, overlap 1722207 CGCCCAGCACGAACA CGCCGGTGACGATCGCCGCGACCA GCA CGGCCGCGGCGGCGGTGAC-GGCG ACGGCCTTGCCGCGT SCO1611 1723281 - 1722499 - | short chain dehydrogenase SCO1612 1724729 - 1723278 - | aldehyde dehydrogenase TERM 424 1723678 - 1723662 - G 77 -15.1 -3.50853 | CGGCGGGAACCAGAA CCCGGGG CCG CCCCGGG GCGCCCTGCCGCGGA TERM 425 1723947 - 1723905 - G 71 -15.4 -3.14132 | opp_overlap 1723910 1723930, overlap 1723908 GCTGTTGTCGAGGAA GGACATGGGCGTCGCGGCCG CGG CGGCCTCGACGTCCGCGTCG GCGAAGACGATGTTG SCO1613 1726114 - 1724726 - | glutamine synthetase SCO1614 1726192 - 1726902 + | transcriptional regulator SCO1615 1726978 - 1727706 + | hypothetical protein SCO1616 1729404 - 1728427 - | transcriptional regulator SCO1618 1731305 - 1730586 - | hypothetical protein SCO1617 1729475 - 1730659 + | integral membrane protein SCO1619 1731885 - 1731316 - | regulatory protein SCO1620 1734874 - 1732259 - | glycine betaine transport system permease protein SCO1621 1735961 - 1734867 - | glycine betaine transport ATP-binding protein SCO1622 1736156 - 1737061 + | 5'-3' exonuclease TERM 426 1737063 - 1737082 + F 72 -11.4 -3.64703 | gap 1 CGCTCACCGCCTGAG CGGCGCCGC GCG GCGGC-CCG TTTCCATGAGCCACA SCO1623 1737167 - 1738009 + | hypothetical protein SCO1624 1738998 - 1738408 - | acetyltransferase SCO1625 1739097 - 1740071 + | ribosomal pseudouridine synthase SCO1626 1741561 - 1740065 - | cytochrome P450 TERM 427 1741376 - 1741421 + g 70 -13.3 -3.41051 | gap 1 CCACATGGGTACGTC GTCGTG-GAGCAGCGCGGGC GCCACCG GCCCGTGCTGCTCGCGCAGC TTCTCGTACAGCTCC SCO1627 1742167 - 1741637 - | ATP-GTP binding protein SCO1628 1742654 - 1742238 - | hypothetical protein SCO1629 1743058 - 1742651 - | hypothetical protein SCO1630 1744680 - 1743055 - | integral membrane protein SCO1631 1747935 - 1745083 - | helicase SCO1632 1748953 - 1748003 - | integral membrane protein SCI4115c SCO1633 1749288 - 1749001 - | secreted protein SCO1634 1749759 - 1749565 - | small membrane protein SCO1635 1750081 - 1749770 - | hypothetical protein SCO1636 1751160 - 1750078 - | hypothetical protein TERM 428 1750200 - 1750226 + g 76 -17.2 -2.88544 | CGTCGTACGCGGCGA GCGCCTCGCGGG CGG CCCGCCGGGCGC TGTCTGCCAGTGCGG SCO1637 1752132 - 1751179 - | hypothetical protein TERM 429 1752235 - 1752198 - R 74 -9.7 -4.07568 | overlap 1752199 GGTGGCGCGGGAAAA GCCGAGGGCCCACGCCC GGAC AGGCATGGACCCCAGGT GACCGGCTCCGAACG SCO1638 1752641 - 1752270 - | peptidyl-prolyl cis-trans isomerase SCO1639 1753708 - 1752701 - | secreted peptidyl-prolyl cis-trans isomerase protein TERM 430 1753813 - 1753785 - R 86 -18.2 -3.29511 | overlap 1753806 TCTACGGCGTGAGAA GGGCACCGCACG GCTAA CGTACGGTGCCC GTGTGGCGTTCCGCG SCO1640 1755251 - 1753890 - | hypothetical protein SCO1641 1756478 - 1755261 - | transport protein SCO1642 1756582 - 1757634 + | LacI family regulator SCO1643 1758413 - 1757649 - | 20S proteasome alpha-subunit SCO1644 1759320 - 1758475 - | 20S proteasome beta-subunit precursor SCO1645 1759865 - 1759272 - | hypothetical protein TERM 431 1759528 - 1759475 - GR 78 -6.8 -4.42062 | gap 3, overlap 1759476 1759478 GAGCCTTCAAACAAA TCACGCAGAGGCCCATCTGAGAGGCGA CCA TCGCGTCCC-GCTCGGCCTC-G-GTGA GGCCGTAGTGACGCT SCO1646 1760117 - 1759899 - | hypothetical protein SCO1647 1761789 - 1760296 - | hypothetical protein TERM 432 1761636 - 1761646 + g 78 -8.2 -4.30576 | overlap 1761631 CGAAGCCTCGCGCGT CCCG GAG CGGG TTTTCCTCCTCGAAG TERM 433 1761990 - 1762037 + r 71 -8.2 -4.12188 | gap 1, opp_overlap 1761992 1761994, overlap 1761991 GCCGGGGCTCCGGAA AAC-AGTCGGCTGCGGGTACCCG GTG TGGGCACCCGCAGCCGCCCCGCG TTTTACAGGTACTGA TERM 434 1762034 - 1761992 - R 100 -19.1 -4.07568 | opp_overlap 1761991 1761990, overlap 1761994 CGGGGCTCCGGAAAA CAGTCGGCTGCGGGTACCC GGTGT GGGCACCCGCAGCCGCCCC GCGTTTTACAGGTAC TERM 435 1762032 - 1761994 - R 100 -23.9 -3.63744 | opp_overlap 1761991 1761990, overlap 1761992 GGGCTCCGGAAAACA GTCGGCTGCGGGTACCC GGTGT GGGCACCCGCAGCCGCC CCGCGTTTTACAGGT SCO1648 1763806 - 1762040 - | AAA ATPase SCO1649 1764052 - 1764357 + | ferredoxin SCO1650 1765022 - 1764432 - | secreted protein TERM 436 1765176 - 1765233 + r 100 -38.7 -2.57132 | overlap 1765177 1765183 GCGGTGGCCGTCAAC GCGTCGACGCCGTGGTGGAGTTCCCGG AGGT CCGGGAACTCCACCACGGCGTCTGTGC GTTGTACGCGGCACG TERM 437 1765177 - 1765234 + r 100 -33.8 -3.28712 | gap 2, overlap 1765176 1765183 CGGTGGCCGTCAACG CGT-C-GACGCCGTGGTGGAGTTCCCGG AGGT CCGGGAACTCCACCACGGCGTCTGTGCG TTGTACGCGGCACGG TERM 438 1765183 - 1765226 + r 100 -37 -2.96711 | overlap 1765176 1765177 CCGTCAACGCGTCGA CGCCGTGGTGGAGTTCCCGG AGGT CCGGGAACTCCACCACGGCG TCTGTGCGTTGTACG SCO1651 1766159 - 1765257 - | hypothetical protein SCO1652 1767411 - 1766287 - | hypothetical protein TERM 439 1768274 - 1768222 - H 93 -22.6 -3.06796 | gap 1 GCGCACGCGACGGAA GCGGCGGTC-GAGCCGGCGGCCCCG GCGT CGGAGACGGCGGCCCCGGCCGCCGC GCCTGCGCCTGTGGC SCO1653 1768285 - 1769139 + | hypothetical protein SCO1654 1769156 - 1769827 + | two-component response regulator TERM 440 1769884 - 1769928 + T 100 -37.4 -3.89346 | GCGGCCCGCGCGCAA CGCGAAGGGCGCCCTCTCCC GGACG GGGAGAGGGCGCCCTTCGCG TTTGTCCGGTGCCGG SCO1655 1771550 - 1769946 - | lipoprotein oligopeptide binding protein TERM 441 1770456 - 1770507 + g 79 -14.5 -3.61398 | overlap 1770458 GACCGGCGTGGTGAT GTCCG-CGTCCTCCAGCGTCGCC TTCGCCTT GGCGACGCTGG-GGTCGCCGTAC TTGTTGAAGAACGAG TERM 442 1770458 - 1770504 + g 77 -17.3 -2.93073 | gap 1, overlap 1770456 CCGGCGTGGTGATGT CCGCGTCCTCCAGCGTCGCC TTCGCCTT GGCGACGCTGG-GGTCGCCG TACTTGTTGAAGAAC TERM 443 1771930 - 1771948 + r 70 -12.4 -3.30124 | CGGGGAACATCCATC GGGTCGCA CCG TGCGGCCC TTCTCGGAAATGCCG SCO1656 1772695 - 1771994 - | hydrolase SCO1657 1776333 - 1772821 - | methionine synthase SCO1658 1776737 - 1777501 + | glycerol operon regulatory protein SCO1659 1777840 - 1778634 + | glycerol uptake facilitator protein SCO1660 1778726 - 1780264 + | glycerol kinase SCO1661 1780273 - 1781889 + | glycerol-3-phosphate dehydrogenase SCO1662 1782041 - 1783042 + | hypothetical protein TERM 444 1783045 - 1783088 + T 100 -30.6 -3.64198 | opp_overlap 1783048 1783052, overlap 1783049 GTCGGAGGACTGAGC GAAGGAACCAGGGCCGCTTC AAGA GAAGCGGCCCTGGTTCTTTC TTCTGTCTGTACGCC TERM 445 1783085 - 1783048 - T 100 -24.3 -3.08464 | opp_overlap 1783045 1783049, overlap 1783052 GGAGGACTGAGCGAA GGAACCAGGGCCGCTTC AAGA GAAGCGGCCCTGGTTCT TTCTTCTGTCTGTAC TERM 446 1783049 - 1783084 + T 100 -27.8 -4.4458 | opp_overlap 1783048 1783052, overlap 1783045 GAGGACTGAGCGAAG GAACCAGGGCCGCTTC AAGA GAAGCGGCCCTGGTTC TTTCTTCTGTCTGTA TERM 447 1783081 - 1783052 - T 100 -23.7 -3.3782 | opp_overlap 1783049 1783045, overlap 1783048 GACTGAGCGAAGGAA CCAGGGCCGCTTC AAGA GAAGCGGCCCTGG TTCTTTCTTCTGTCT cysS 1784336 - 1783107 - | cysteinyl-tRNA synthetase TERM 448 1784042 - 1784094 + g 91 -21.1 -3.31792 | opp_overlap 1784009 CGAGGGCGGTCCAGT CGACCCCGTCGCGCACGGCCCGCTC CAG GAGCGGGTCGTCCACGTCGGTGACG TTCTGGACGTAGTGG SCO1664 1785237 - 1784440 - | hypothetical protein SCO1665 1785824 - 1785234 - | hypothetical protein SCO1666 1786596 - 1785910 - | phosphatase TERM 449 1787305 - 1787344 + G 72 -12 -3.61715 | opp_overlap 1787334 GGGTACCGGGGTGTA CGGCGGCGGCGTGCCGTT CGTG AACGACAGGGCGCGGCCG TTCTTCCGGGACGTG SCO1667 1786649 - 1787653 + | ion transport protein SCO1668 1788456 - 1787668 - | hypothetical protein TERM 450 1788606 - 1788619 + r 70 -9.5 -3.75024 | GGAGGCGTAACCCCG CGCGC GTGG GCGCG TTGTTCCTCGTGACG SCO1669 1789748 - 1788693 - | ATP/GTP-binding protein SCO1670 1789862 - 1790848 + | oxidoreductase TERM 451 1790932 - 1790882 - g 70 -16.1 -2.66964 | gap 2, overlap 1790879 TCACCGAGGACACCA CGGACGCCGTGGACGCCGGGCCGGA GAC CCCGGGC-GACG-CGACGGCGCCCG CGACGGAGGCCGCCG SCO1671 1790845 - 1793163 + | hypothetical protein SCO1672 1794029 - 1793226 - | hypothetical protein TERM 452 1793932 - 1793968 + g 73 -16.5 -3.02511 | TCTTCTTCTCCCGAC CGGCGTTCGACCGCGGC AAG GTGGCGGTCGAGCGCGG TCTTGACCGCCTCGG SCO1673 1794077 - 1794265 + | hypothetical protein TERM 453 1794311 - 1794278 - T 100 -21.7 -3.55071 | TGACAGCGGCGGAAA CGGAGCGGGCCCCGC CGGT GCGGAGCCCGCTGCG TGTACCGGTGCGCCC SCO1674 1795109 - 1794330 - | secreted protein TERM 454 1795260 - 1795214 - R 100 -21.5 -3.53761 | overlap 1795215 GAATGTCCCCCGAAA GGCCGTCGGCCCCGGAGCGCA TGGCG TGCACTCCGGGGCCGGCGGAA TCAGATCCTCACGGG TERM 455 1795259 - 1795215 - R 95 -25 -2.72043 | overlap 1795214 AATGTCCCCCGAAAG GCCGTCGGCCCCGGAGCGCA TGGCG TGCACTCCGGGGCCGGCGGA ATCAGATCCTCACGG SCO1675 1795522 - 1795289 - | small membrane protein SCO1676 1796992 - 1795655 - | hypothetical protein TERM 456 1796781 - 1796834 + g 73 -15.4 -3.29144 | gap 1 CGGGCCACCGTGGAG GCGCGTCCGGGGTGGGACTCGAA GATCTTCGG TTCCAGTCCCACCTCGG-CGAGC TTCTCGGCGACGTAC TERM 457 1796837 - 1796891 + g 70 -14.4 -3.25223 | gap 3, overlap 1796839 CACCTCGGCGAGCTT CT-CGGCGACGTACTCGGCGGCCTTGC GCTC GCCCGGCC-CCGAGTG-GTCGCCGTAG TTGCTGGTGTCGATC TERM 458 1796839 - 1796888 + g 76 -17.2 -2.80988 | gap 2, overlap 1796837 CCTCGGCGAGCTTCT CGGCGACGTACTCGGCGGCCTTGC GCTC GCCCGGCC-CCGAGTG-GTCGCCG TAGTTGCTGGTGTCG TERM 459 1797254 - 1797285 + H 93 -13.8 -4.2558 | gap 1, opp_overlap 1797254 1797261, overlap 1797261 CCCCCTCGGACACCA GCTG-AAACCCCTGC TGA GCAGGGGTTTTCTGC TTTTCCTGCACCGTG TERM 460 1797277 - 1797261 - H 79 -13.7 -3.63068 | opp_overlap 1797254 1797261, overlap 1797254 GGACACCAGCTGAAA CCCCTGC TGA GCAGGGG TTTTCTGCTTTTCCT TERM 461 1797261 - 1797277 + H 100 -13.7 -4.68539 | opp_overlap 1797261 1797254, overlap 1797254 GGACACCAGCTGAAA CCCCTGC TGA GCAGGGG TTTTCTGCTTTTCCT SCO1677 1797321 - 1797695 + | hypothetical protein SCO1678 1798424 - 1797723 - | transcriptional regulator SCO1679 1798561 - 1799088 + | gluconokinase SCO1680 1799183 - 1800580 + | gluconate permease SCO1681 1800620 - 1801381 + | gluconate dehydrogenase SCO1682 1801378 - 1802454 + | zinc-binding alcohol dehydrogenase SCO1683 1804067 - 1802529 - | amino acid permease SCO1684 1805142 - 1804126 - | hypothetical protein SCO1685 1805384 - 1806277 + | integral membrane protein SCO1686 1806297 - 1806842 + | NTP pyrophosphohydrolase SCO1687 1807505 - 1807897 + | hypothetical protein SCO1688 1807900 - 1808241 + | hypothetical protein SCO1689 1808375 - 1809400 + | phosphotransferase SCO1690 1809406 - 1810620 + | acyl-CoA dehydrogenase SCO1691 1811386 - 1810631 - | tetR transcriptional regulator TERM 462 1810811 - 1810858 + g 80 -6.9 -4.51812 | gap 2, overlap 1810810 1810811 CTGCCCCTCCTCGAT CA-GCGCGCG-GAAGCGCTCGTG GTAG CGCCGGCGCTCCGCGCGCACCTG TTTGTTCTTCTCCGG SCO1692 1812153 - 1811383 - | oxidoreductase SCO1693 1813536 - 1812259 - | hypothetical protein TERM 463 1812414 - 1812357 - G 87 -19.7 -3.12351 | GCTGTCCAGACGGAA CCTGCTCGCCACGACGGCCGCGGTGGC GGCC GGCACCACCGCCGCCACGGCGGGCACG GCCCACGCGGCACCC TERM 464 1813608 - 1813661 + r 73 -13.8 -3.30441 | gap 1 CCGGTGACCGCCGGG CCGGCCGGTC-ACCGGTGGGAGGTG AACTC CACGACCTGCTGGTAGGTCGGCCGG TTCTGCCAGCTGATG SCO1694 1816297 - 1813616 - | penicillin acylase SCO1695 1816646 - 1817248 + | hypothetical protein SCO1696 1817349 - 1818083 + | hypothetical protein SCO1697 1818878 - 1818351 - | merR family transcriptional regulator SCO1698 1819009 - 1819470 + | hypothetical protein SCO1699 1820108 - 1819461 - | transcriptional regulator SCO1700 1820483 - 1820169 - | hypothetical protein TERM 465 1820529 - 1820492 - R 70 -13.3 -3.31144 | opp_overlap 1820492, overlap 1820494 CGCTCATGGGGACAA GAGTCGGCGGACGTGGC CCGC GCCACATCCGCCGTCGT ACTCAGTTCGCGTAC TERM 466 1820527 - 1820494 - R 87 -20.3 -3.22475 | opp_overlap 1820492, overlap 1820492 CTCATGGGGACAAGA GTCGGCGGACGTGGC CCGC GCCACATCCGCCGTC GTACTCAGTTCGCGT SCO1701 1821710 - 1820559 - | acyl-CoA dehydrogenase SCO1702 1821800 - 1822441 + | transcriptional regulator SCO1703 1822505 - 1823218 + | transcriptional regulator SCO1704 1823292 - 1824266 + | hypothetical protein SCO1705 1825614 - 1824517 - | alcohol dehydrogenase (zinc-binding) SCO1706 1827026 - 1825638 - | aldehyde dehydrogenase SCO1707 1828488 - 1827151 - | ABC sugar transporter, ATP-binding subunit SCO1708 1828912 - 1828712 - | hypothetical protein SCO1709 1830306 - 1828915 - | integral membrane transport protein SCO1710 1831797 - 1830346 - | integral membrane transport protein SCO1711 1834164 - 1831921 - | dehydrogenase SCO1712 1834906 - 1834289 - | TetR family transcriptional regulator SCO1713 1835007 - 1834903 - | hypothetical protein SCO1714 1835573 - 1835004 - | secreted protein SCO1715 1835784 - 1837109 + | homogentisate 1,2-dioxygenase SCO1716 1837136 - 1837885 + | GntR family transcriptional regulator SCO1717 1837893 - 1839068 + | hypothetical protein SCO1718 1839798 - 1839094 - | regulator SCO1719 1839862 - 1840860 + | ABC-transporter ATP-binding protein SCO1720 1840857 - 1841672 + | ABC-transporter transmembrane protein SCO1721 1842166 - 1841897 - | hypothetical protein SCO1722 1843034 - 1842282 - | hypothetical protein SCO1723 1843588 - 1843031 - | RNA polymerase sigma factor SigK SCO1724 1843788 - 1845440 + | serine/threonine protein kinase SCO1725 1846249 - 1845443 - | secreted hydrolase SCO1726 1846435 - 1847529 + | ATPase SCO1727 1847564 - 1848331 + | hypothetical protein SCO1728 1848816 - 1848412 - | GntR family transcriptional regulator SCO1729 1848849 - 1849775 + | hypothetical protein SCO1730 1849756 - 1850256 + | hypothetical protein SCO1731 1850887 - 1850270 - | hypothetical protein SCO1732 1851039 - 1851173 + | hypothetical protein SCO1733 1851669 - 1851199 - | acetyltransferase TERM 467 1851606 - 1851657 + g 74 -14.6 -3.52652 | gap 3 GGAGGTACGCGGCGT CGG-TCACGGCCTGC-ACCGCCG GCACGTCCG CGGCGGTCGCGGGCCG-GATCCG TTCTCGTTCCATGCC TERM 468 1852828 - 1852862 + G 77 -18.4 -2.75074 | opp_overlap 1852809, overlap 1852825 GCCCTACATCGCCGT CGGCGGCGCCGCGGCC CTG GCCCTCGGCGCGGCCG TCCTGTTCGCGTCGG SCO1734 1851848 - 1852918 + | secreted cellulose-binding protein SCO1735 1853898 - 1853026 - | secreted lipase SCO1736 1854524 - 1854078 - | MarR family transcriptional regulator SCO1737 1854635 - 1855009 + | hypothetical protein SCO1738 1855990 - 1855022 - | hypothetical protein SCO1739 1859544 - 1855987 - | DNA polymerase III, alpha chain TERM 469 1856172 - 1856205 + g 70 -13.8 -3.21912 | gap 1 CCGAACCGGCGAGGC GGCGGCG-CGCCGGG CCGCC CCCGGGGGCGTCGCC TTCCTGGCTTCCGCC TERM 470 1859072 - 1859031 - G 70 -13.5 -3.41602 | gap 1 GCCAGGGGACGAGAA GCCGCG-CGGCGCGGTCGGG ACG CCCGGCGGCGAGGGCGCGGC CGACGTCGGAGTCGG SCO1740 1859718 - 1860782 + | hypothetical protein SCO1741 1861979 - 1860897 - | secreted serine protease SCO1742 1862249 - 1863169 + | ABC-transporter ATP-binding protein SCO1743 1863166 - 1863885 + | ABC-transporter transmembrane protein TERM 471 1863903 - 1863945 + G 86 -21.3 -3.04792 | gap 1, overlap 1863907 GACCTCTTCGGGCGG GC-CCGGGCGGCGTACGACC TGTT GGTCGCGCGCCGCTCGGCGC TGTTCGACCTCGTGC SCO1744 1863882 - 1865048 + | two-component system sensor kinase SCO1745 1865045 - 1865710 + | two-component system response regulator SCO1746 1866679 - 1865777 - | secreted serine protease SCO1747 1867738 - 1866887 - | hypothetical protein SCO1748 1868989 - 1867793 - | expression regulator SCO1749 1869279 - 1869719 + | hypothetical protein SCO1750 1870961 - 1869768 - | acyl CoA dehydrogenase TERM 472 1870778 - 1870810 + g 72 -16.4 -2.79183 | gap 2 TACCCCCGAGCTCCC GCG-CGAGCT-CCCGG ATG CCGGGCAGCTCGCCGC TCTCGTACCAGTCCG SCO1751 1872921 - 1871317 - | transmembrane transport protein SCO1752 1873183 - 1874373 + | integral membrane protein SCO1753 1874625 - 1875647 + | integral membrane protein SCO1754 1875975 - 1875760 - | hypothetical protein SCO1755 1877167 - 1876319 - | hypothetical protein SCO1756 1877577 - 1878374 + | hypothetical protein SCO1757 1878448 - 1878741 + | hypothetical protein TERM 473 1878753 - 1878802 + T 100 -46.7 -3.18728 | CTGACCGCCGGACGA GCGACGGGTGAGGGGCGCCCCCC GGCC GGGGGGCGCCCCTCACCCGTCGC TTGCCTGTTCCCGCT engA 1880298 - 1878820 - | GTP-binding protein EngA TERM 474 1880377 - 1880397 + r 77 -10.3 -4.11216 | TCAAGTGTCACTCAG CGCCCGGTG AGG CGCCTGGCG TTTTCCAGGTGCGCG SCO1759 1881035 - 1880373 - | transferase SCO1760 1881727 - 1881032 - | cytidylate kinase SCO1761 1883100 - 1882015 - | prephenate dehydrogenase SCO1762 1883459 - 1883097 - | chorismate mutase SCO1763 1883621 - 1884016 + | iron-sulphur protein (secreted protein) TERM 475 1884050 - 1883998 - Tf 87 -16.1 -3.6502 | CACGGTGGAGGGAAA TTCGGTCCGCCTGGCGTGAGCGGCC CGC GTACGCTCCCGCCATGCGCCCCGAA GCCCCCGGCAGCCAC SCO1765 1885478 - 1884726 - | hypothetical protein SCO1764 1884039 - 1884800 + | hypothetical protein SCO1766 1886502 - 1885483 - | glycohydrolase SCO1767 1887218 - 1886499 - | DNA hydrolase SCO1768 1888427 - 1887312 - | pseudouridine synthase TERM 476 1888315 - 1888366 + g 86 -21.4 -3.01712 | gap 1, overlap 1888358 TCGTCGCGGTTGTTG CCGGCG-CCGCGGTGGTTGCCGCGG CCC CCGCTGCTCCCGCCGCGGCCGCCGC TGTTGCCACCACGGC SCO1769 1889098 - 1888427 - | hypothetical protein SCO1770 1889889 - 1889095 - | hypothetical protein TERM 477 1889176 - 1889233 + g 90 -21.4 -3.31144 | gap 1, overlap 1889166 CGCCTCCCCGTCGCC GCCCGTCCAGC-GGACCAGGAGGTCGC CGAGC GCGGTTTCCTGGTCCAGCTCGACGGCC TTCTCCCGGTACAGC SCO1771 1890978 - 1890421 - | hypothetical protein SCO1772 1891997 - 1890975 - | partitioning or sporulation protein TERM 478 1891912 - 1891900 - G 71 -9.1 -3.85698 | opp_overlap 1891899 1891900 TCCGGGTCGTAGAAA TGCCC CTC GGGCA GTTCGTCGTAGTCGG TERM 479 1892447 - 1892401 - R 100 -36.9 -2.84732 | opp_overlap 1892407, overlap 1892403 1892405 1892407 CGCAAAGTGACCATA CACACACCCGGCCGGACCTTG TCGGG CAAGGTCCGGCCGGGTGTGTG GCGTTGACGGTGTCT TERM 480 1892445 - 1892403 - R 100 -33.7 -2.96984 | opp_overlap 1892407, overlap 1892401 1892405 1892407 CAAAGTGACCATACA CACACCCGGCCGGACCTTG TCGGG CAAGGTCCGGCCGGGTGTG TGGCGTTGACGGTGT TERM 481 1892443 - 1892405 - R 100 -30.5 -3.03214 | opp_overlap 1892407, overlap 1892403 1892401 1892407 AAGTGACCATACACA CACCCGGCCGGACCTTG TCGGG CAAGGTCCGGCCGGGTG TGTGGCGTTGACGGT TERM 482 1892441 - 1892407 - R 100 -27.3 -3.0682 | opp_overlap 1892407, overlap 1892405 1892403 1892401 GTGACCATACACACA CCCGGCCGGACCTTG TCGGG CAAGGTCCGGCCGGG TGTGTGGCGTTGACG TERM 483 1892407 - 1892441 + r 100 -28 -2.91681 | opp_overlap 1892407 1892405 1892403 1892401 GTGACCATACACACA CCCGGCCGGACCTTGT CGG GCAAGGTCCGGCCGGG TGTGTGGCGTTGACG SCO1773 1893608 - 1892493 - | L-alanine dehydrogenase SCO1774 1895799 - 1893751 - | regulatory protein SCO1775 1896583 - 1895948 - | hypothetical protein TERM 484 1896652 - 1896616 - R 95 -19.4 -3.61654 | opp_overlap 1896606 CAGACGTACGCGAAA GCCGGGGCCCGCGC CGTTCGAGT GCGCGCGCCCCGGC CACCGTACAACTGGT SCO1776 1898320 - 1896671 - | CTP synthetase TERM 485 1898386 - 1898425 + H 87 -8.4 -4.82901 | gap 1, overlap 1898377 CTCCGCCCCGGTCGT CCCGGGTGTCGTCGGCGGC GCC GTCGCTG-CGGTTCCGGGG TTTTTCTCCCACCGG SCO1777 1898870 - 1900708 + | hypothetical protein TERM 486 1902004 - 1901951 - g 72 -16.6 -2.83271 | gap 2, overlap 1901948 GGACCCGCACAAGGA CGCGCCGCCCCCGGCGGGCTCGGTCC TCGT GGAC-GTGCCCGGCGGGGGCCCCG-G CACGGGATCGGTCCG SCO1778 1901295 - 1902941 + | transcriptional regulator SCO1779 1904169 - 1902964 - | hypothetical protein TERM 487 1904420 - 1904459 + r 72 -12.9 -3.55801 | gap 3, opp_overlap 1904389 GGAGTCCCTGCCGGT CGGCCCG-GCC-CCCGG-AG TCC CTACCGGTCGGCCCGGGCCG TTTCCAGCAGTTCCT SCO1780 1906158 - 1904440 - | DNA repair protein TERM 488 1905946 - 1905988 + g 75 -13.3 -3.61715 | gap 1 GGCCCGGACGGCCAC CGCGG-CGTCGCCGGGCACG GCGA TGCGCCCCTCGACGACCGCG TTCTTCGCCCCGATC ppnK 1907228 - 1906323 - | inorganic polyphosphate/ATP-NAD kinase SCO1782 1908040 - 1907225 - | hypothetical protein SCO1783 1908395 - 1908048 - | hypothetical protein SCO1784 1908438 - 1908785 + | hypothetical protein SCO1785 1909674 - 1908769 - | iron-siderophore uptake system ATP-binding component SCO1786 1910798 - 1909671 - | iron-siderophore uptake system transmembrane component SCO1787 1911841 - 1910795 - | iron-siderophore uptake system transmembrane component SCO1788 1913017 - 1911986 - | hypothetical protein SCO1789 1913090 - 1914382 + | hypothetical protein SCO1790 1915100 - 1914468 - | hypothetical protein SCO1791 1916356 - 1915097 - | hypothetical protein TERM 489 1916390 - 1916448 + r 72 -15.9 -2.76815 | opp_overlap 1916394 1916395 1916399, overlap 1916393 1916402 CCGGTGCGCCCTGGA AAAACGAAAGGACCCCTGGTCCCCAGC TGAAC GCTGGGGACCAGGGGTCCTTCCCAAAG ATTGTTCGGCGGCGT TERM 490 1916444 - 1916394 - R 100 -32.1 -4.56597 | opp_overlap 1916390 1916393 1916402, overlap 1916395 1916399 TGCGCCCTGGAAAAA CGAAAGGACCCCTGGTCCCCAGC TGAAC GCTGGGGACCAGGGGTCCTTCCC AAAGATTGTTCGGCG TERM 491 1916443 - 1916395 - R 100 -35.6 -3.33744 | opp_overlap 1916390 1916393 1916402, overlap 1916394 1916399 GCGCCCTGGAAAAAC GAAAGGACCCCTGGTCCCCAGC TGAAC GCTGGGGACCAGGGGTCCTTCC CAAAGATTGTTCGGC TERM 492 1916439 - 1916399 - R 100 -32.8 -4.32046 | opp_overlap 1916390 1916393 1916402, overlap 1916395 1916394 CCTGGAAAAACGAAA GGACCCCTGGTCCCCAGC TGAAC GCTGGGGACCAGGGGTCC TTCCCAAAGATTGTT TERM 493 1916402 - 1916436 + r 100 -27.3 -2.71263 | opp_overlap 1916399 1916395 1916394, overlap 1916390 1916393 GGAAAAACGAAAGGA CCCCTGGTCCCCAGC TGAAC GCTGGGGACCAGGGG TCCTTCCCAAAGATT TERM 494 1917121 - 1917137 + r 70 -2.9 -4.4715 | overlap 1917123 GGGGAAGATCAGCCT GTTATCC CCG GGGTACC TTTTATCCGTTGAGC TERM 495 1917783 - 1917794 + r 74 -2.2 -4.7254 | CGCCTTACGGCTTCG CACG GACC TGTG TTTTTAGTAAACAGT SCO1792 1922769 - 1922128 - | 3-methyladenine DNA glycosylase SCO1793 1922916 - 1923698 + | secreted protein SCO1794 1923750 - 1924289 + | hypothetical protein TERM 496 1924313 - 1924354 + F 93 -14.4 -4.24397 | opp_overlap 1924311, overlap 1924315 AGCGTTCATGGAACG TTTGCCCGCCCCTGGTCT TGGAAT GGATCAGGGGCGGGCATC TTTATATTGCGTTGT TERM 497 1924315 - 1924352 + F 100 -21.4 -3.71114 | opp_overlap 1924311, overlap 1924313 CGTTCATGGAACGTT TGCCCGCCCCTGGTCT TGGAAT GGATCAGGGGCGGGCA TCTTTATATTGCGTT SCO1795 1924446 - 1924952 + | hypothetical protein SCO1796 1926053 - 1925094 - | secreted protein SCO1797 1926662 - 1926231 - | integral membrane protein SCO1798 1927514 - 1926717 - | ABC transporter ATP-binding subunit SCO1799 1927668 - 1928447 + | hypothetical protein SCO1800 1928841 - 1928593 - | small secreted protein SCO1801 1929643 - 1929011 - | two component response regulator SCO1802 1930823 - 1929645 - | two-component system sensor kinase SCO1803 1931041 - 1931736 + | oxidoreductase SCO1804 1931736 - 1932812 + | S-adenosylmethionine:tRNA ribosyltransferase-isomerase TERM 498 1932950 - 1932977 + F 90 -17.1 -3.6715 | ACTCGTCCGTTTTGA GCGGGGCAGAT GGTCCA ATCTGCCCCGC TTTGCCGTTCCCTGA TERM 499 1933068 - 1933091 + F 79 -13.1 -3.85698 | opp_overlap 1933052, overlap 1933058 1933054 GCTCTCGTCGCTCAG CGCCGTGGG TTCTCC CCCGCGGCG TTTGTGCCGGAAGCA TERM 500 1933261 - 1933222 - g 72 -13.6 -3.36803 | GAACCGCACCCAGAA GGCCGCGATCGCCG-GCG TCGGCG CGCTCGGCG-CCGCAGCC GTCGCCCTCACCGCC TERM 501 1933471 - 1933447 - g 75 -12.8 -3.61398 | overlap 1933432 1933462 GGCGGCTGCCAAGAA GGCGACCGCC AAGAA GGCGACCGCC GAGAAGAAGGCCGCC TERM 502 1933516 - 1933495 - g 70 -13.7 -3.28712 | gap 1, overlap 1933480 GGCCGCCGCCGAGAA GGCCGC-CGC CAA GCGTGCGGCC AAGGAGACCACCAGC SCO1805 1933166 - 1933900 + | hypothetical protein SCO1806 1936657 - 1934027 - | ABC transporter ATP-binding protein SCO1807 1936844 - 1938898 + | integral membrane protein SCO1808 1939010 - 1940242 + | phosphoserine phosphatase SCO1809 1940832 - 1940314 - | hypothetical protein SCO1810 1941131 - 1940925 - | hypothetical protein SCO1811 1941431 - 1941315 - | hypothetical protein SCO1812 1942781 - 1941516 - | integral membrane transporter SCO1813 1942957 - 1943649 + | GntR family transcriptional regulator SCO1814 1944505 - 1943738 - | enoyl-(acyl carrier protein) reductase SCO1815 1945215 - 1944511 - | 3-oxacyl-(ACP) reductase SCO1816 1945493 - 1947016 + | hypothetical protein SCO1817 1947013 - 1948407 + | hypothetical protein SCO1818 1948453 - 1949721 + | tyrosyl-tRNA synthetase TERM 503 1949757 - 1949711 - T 75 -17.4 -2.62184 | gap 3, overlap 1949692 1949691 CCGCGGTGGAGATCA CCGGCGCCTGAGCGGACGCACCC GCAA GGG-GCGT--GCTCCGGCGCCGG TGATCGGCTGCCGGC SCO1819 1950093 - 1949812 - | integral membrane protein SCO1820 1950275 - 1950754 + | integral membrane protein TERM 504 1950896 - 1950937 + T 75 -14.3 -3.48395 | overlap 1950897 CCGTCGGAGCGACGG ACCGACGCCGGGCAGCTCC CCCC GTGGCTGCTCGGCGTCGCC TTGTGTGCGGGCCCT TERM 505 1950897 - 1950936 + T 78 -17.8 -2.68823 | overlap 1950896 CGTCGGAGCGACGGA CCGACGCCGGGCAGCTCC CCCC GTGGCTGCTCGGCGTCGC CTTGTGTGCGGGCCC moaA 1952245 - 1951220 - | molybdenum cofactor biosynthesis protein A TERM 506 1952362 - 1952309 - R 95 -26.2 -2.52543 | gap 2 ATCGGCCCGAACCCA CGACGCGCGGCGCGGCCGCGTCGTAG GGAT CTACGA-GCGGCCGCGCCG-ACACCG GTCGGGCGCGGGGCG SCO1822 1954012 - 1952378 - | transmembrane transport protein SCO1823 1954383 - 1954009 - | integral membrane protein TERM 507 1954586 - 1954624 + H 73 -13.8 -3.35775 | overlap 1954583 1954613 GCACCACTACGTCAT GTACCTGCCCGGCCCG CTTCACC CGTGCCCGGCAGGTGC TGTTTGCCGGATGAT SCO1824 1954737 - 1956275 + | secreted subtilisin-like protease SCO1825 1956291 - 1956929 + | membrane protein SCO1826 1956980 - 1957987 + | membrane protein SCO1827 1958139 - 1959125 + | DNA polymerase III subunit epsilon SCO1828 1959189 - 1959422 + | hypothetical protein SCO1829 1959486 - 1960358 + | hypothetical protein SCO1830 1960424 - 1962211 + | hypothetical protein SCO1831 1962217 - 1962972 + | oxidoreductase SCO1832 1963594 - 1963007 - | hypothetical protein SCO1833 1964112 - 1963591 - | hypothetical protein SCO1834 1964651 - 1964268 - | hypothetical protein SCO1835 1964833 - 1964648 - | hypothetical protein SCO1836 1965378 - 1964896 - | stress-like protein SCO1837 1965466 - 1966254 + | hypothetical protein SCO1838 1967078 - 1966275 - | enoyl-CoA hydratase/isomerase TERM 508 1967161 - 1967204 + r 75 -16.6 -2.64155 | opp_overlap 1967167, overlap 1967157 1967156 GGCTAAGTGACTGCA CAGTAACCACCCGGACGGTC GGAC GACCGACCGGGTGGCCACCG TCACTTTCGGAGCCG TERM 509 1967198 - 1967167 - R 93 -21.6 -3.27022 | opp_overlap 1967161 1967157 1967156 GTGACTGCACAGTAA CCACCCGGACGGTC GGAC GACCGACCGGGTGG CCACCGTCACTTTCG SCO1839 1967457 - 1967236 - | transcriptional regulator TERM 510 1967700 - 1967654 - R 100 -20.8 -3.85817 | opp_overlap 1967657 ATTCCTGGTCAGAAA GGCGTCGCGGCCGGACCCCC GGTGGAT GGGGGTCCGGCCGCGAATTC GATGTAGGACACACC TERM 511 1967657 - 1967697 + r 100 -26.2 -3.12351 | opp_overlap 1967654 CCTGGTCAGAAAGGC GTCGCGGCCGGACCCCCG GTGGA TGGGGGTCCGGCCGCGAA TTCGATGTAGGACAC SCO1840 1969392 - 1967794 - | ABC transporter ATP binding protein TERM 512 1969494 - 1969506 + G 73 -9.1 -4.07568 | GGCCAGTCTAACGGG GCGGT GCA ACCGC TTTTCCCAGCCGGGC SCO1841 1969468 - 1970052 + | hypothetical protein SCO1842 1971428 - 1970085 - | hypothetical protein SCO1843 1972880 - 1971753 - | secreted protein SCO1844 1973717 - 1972995 - | aldolase TERM 513 1973966 - 1973993 + G 79 -12 -4.05788 | overlap 1973955 1973992 CTTCTCGCTGATCCT CGCGATTGTGGT GGTA ACCGCACTCGCG TTTGATTTCACGAAC SCO1845 1973943 - 1975214 + | low-affinity phosphate transport protein SCO1846 1975249 - 1975470 + | hypothetical protein TERM 514 1975503 - 1975543 + F 100 -23.3 -3.01712 | GGCGCACGCCCCCGG GGCGGGGCGCGGGACGG ACTCGAA CCGTTCCGCGCCCCACC TCTTCGCGCGCCGGC cobD 1975869 - 1976852 + | cobalamin biosynthesis protein SCO1848 1976849 - 1978357 + | cobyric acid synthase TERM 515 1978795 - 1978770 - g 73 -16.9 -3.04248 | gap 1 GAAGATGCCGGAATA CGGCGTCCACGG CTC CCG-GGACGCCG TGGCGGGCCGCCCGA TERM 516 1980313 - 1980282 - g 70 -13.8 -3.25823 | gap 1 CCTGTGCGAGATCAA GGACGTGCAGATCCG CGA CGG-CCTGCACATCC TGGGCGGCGGCCCGG cobN 1978354 - 1982007 + | cobaltochelatase TERM 517 1983352 - 1983403 + G 79 -18.4 -2.82516 | TGCACCTGGCCGCCA CCGTGCAGGCCGCCGCCCCGCACC AGCG GGCGCGGGGCCGCAGCGGGCCCGG TCTCGTGGTGCGCCG SCO1850 1982004 - 1984022 + | chelatase SCO1851 1984022 - 1984621 + | cob(I)yrinic acid a,c-diamide adenosyltransferase SCO1852 1984618 - 1986078 + | cobyrinic acid a,c-diamide synthase SCO1853 1986075 - 1986806 + | precorrin-2 C20-methyltransferase SCO1854 1987555 - 1986827 - | permease SCO1855 1987618 - 1988463 + | precorrin-4 C11-methyltransferase SCO1856 1988469 - 1989701 + | precorrin-6Y C5,15-methyltransferase SCO1857 1989779 - 1991530 + | bifunctional protein (CbiGH) SCO1858 1991527 - 1992444 + | hypothetical protein SCO1859 1992485 - 1993504 + | hypothetical protein SCO1860 1995057 - 1994050 - | secreted protein TERM 518 1994323 - 1994371 + g 87 -19.7 -3.17075 | gap 1 CCTGGCCAGGGTGAC GGT-GCCGTCGACCTCGGCGAC GTTCAG GTCGCCGGGGTTGACGGAGACC TTGAGTTCGAGCGCG TERM 519 1994803 - 1994827 + g 72 -12.1 -3.61398 | CACCTCGTTGAGGGT GACCGCGAGCG GGA CGTTCACGGTC TTGTTGAGCAGGGAG SCO1861 1996295 - 1995204 - | hypothetical protein SCO1862 1996833 - 1996351 - | integral membrane protein SCO1863 1998165 - 1996945 - | hypothetical protein SCO1864 1998468 - 1998980 + | acetyltransferase SCO1865 1999110 - 2000381 + | diaminobutyrate--2-oxoglutarate aminotransferase TERM 520 2000460 - 2000421 - f 76 -16.5 -3.23692 | gap 2, overlap 2000422 CACCACCACCACGAA CTCCCGGCGTCTTCGGTCC GCGC GG-CCGAGGACGCCGGG-G CCCCTTGCACACCCT TERM 521 2000460 - 2000422 - f 74 -16.7 -2.53894 | gap 1, overlap 2000421 ACCACCACCACGAAC TCCCGGCGTCTTCGGTCC GCGC GG-CCGAGGACGCCGGGG CCCCTTGCACACCCT ectC 2000500 - 2000898 + | L-ectoine synthase SCO1867 2000962 - 2001804 + | hydroxylase TERM 522 2001818 - 2001864 + T 100 -21.8 -4.15044 | opp_overlap 2001805, overlap 2001819 GACTCGCGTCTGAGA C-TCGGGCAGGGGCCTTCTCGT GTGGG ACGGGA-GGCCCCTGCCCGATG TTTCTTCCCGGCCCG TERM 523 2001819 - 2001862 + T 100 -25.5 -3.6761 | gap 1, opp_overlap 2001805, overlap 2001818 ACTCGCGTCTGAGAC TCGGGCAGGGGCCTTCTCGT GTGGG ACGGGA-GGCCCCTGCCCGA TGTTTCTTCCCGGCC SCO1868 2002980 - 2001886 - | hypothetical protein SCO1869 2003753 - 2003040 - | hypothetical protein TERM 524 2003501 - 2003526 + g 70 -13.3 -3.40403 | gap 1 TGCGGTAGGCCAGGC CCTCGGCG-GCG GCC TGCGCGCCGAGG TTGTCCTCACCGGCC SCO1870 2004454 - 2003846 - | hypothetical protein SCO1871 2006127 - 2004598 - | aldehyde dehydrogenase SCO1872 2006250 - 2007023 + | IclR family transcriptional regulator SCO1873 2007027 - 2007497 + | acetyltransferase TERM 525 2007759 - 2007724 - g 71 -14.8 -3.06492 | gap 2 TGACCGACGCCAAGA TCGCCGGGCGGCCGGG GGCGGG CCCGGCCGC--GGCGA AGATGCATGTGGCGT SCO1874 2007606 - 2007818 + | hypothetical protein SCO1875 2007938 - 2009392 + | secreted penicillin binding protein SCO1876 2009469 - 2010041 + | RNA polymerase sigma factor SCO1877 2010038 - 2010712 + | hypothetical protein SCO1878 2011522 - 2010725 - | secreted protein SCO1879 2012792 - 2011647 - | secreted pectinesterase SCO1880 2014193 - 2012859 - | secreted pectate lyase SCO1881 2015061 - 2014258 - | secreted protein TERM 526 2014893 - 2014873 - G 82 -12.5 -4.06419 | GTTGCGGAGAAAGAA GGGCAGGGC CAT GCCCCACCC GGTCTCGGGCGCGGC SCO1882 2016552 - 2015194 - | secreted sugar-binding protein SCO1883 2018172 - 2016628 - | xylanase SCO1884 2019014 - 2018169 - | hypothetical protein SCO1885 2020168 - 2019011 - | oxidoreductase SCO1886 2021061 - 2020165 - | integral membrane transport protein SCO1887 2021993 - 2021058 - | integral membrane transport protein SCO1888 2023845 - 2022115 - | dihydroxy-acid dehydratase SCO1889 2024750 - 2023842 - | dihydropicolinate synthase SCO1890 2025415 - 2024747 - | transcriptional regulator SCO1891 2026183 - 2025584 - | hypothetical protein SCO1892 2026325 - 2027572 + | integral membrane efflux protein SCO1893 2027953 - 2027561 - | lyase SCO1894 2029210 - 2028038 - | hypothetical protein SCO1895 2030157 - 2029207 - | 5-dehydro-4-deoxyglucarate dehydratase TERM 527 2029466 - 2029409 - G 70 -16.1 -2.57463 | overlap 2029396 2029408 AACGGCCGGTAGAAG CCGTCCAGCAGACGGTGCACGGTGGCG TCGT CGCCCTCGCGCAGCGCCCGGTGGAAGG CGACGGCGATCTCGG SCO1896 2030392 - 2031201 + | hypothetical protein TERM 528 2031275 - 2031224 - f 73 -13.7 -3.34043 | opp_overlap 2031273, overlap 2031232 GCGACCACGCGAGAA CCAC-CGAAGAGGCGGACGGGCACC GAAC GG-GCCCGTCCGCTTCCGCATGCGG GCATCCGCGCTGCCC TERM 529 2031266 - 2031232 - f 82 -17.9 -3.14963 | gap 1, overlap 2031224 GCGAGAACCACCGAA GAGGCGGACGGGCACC GAAC GG-GCCCGTCCGCTTC CGCATGCGGGCATCC SCO1897 2031485 - 2032261 + | transcriptional regulator SCO1898 2032364 - 2033734 + | substrate binding protein SCO1899 2033731 - 2034675 + | integral membrane sugar transport protein SCO1900 2034672 - 2035550 + | integral membrane sugar transport protein SCO1901 2035547 - 2036536 + | zinc-binding dehydrogenase SCO1902 2036555 - 2036944 + | hypothetical protein SCO1903 2037030 - 2038229 + | transport associated protein SCO1904 2038877 - 2038269 - | transcriptional regulator SCO1905 2040480 - 2038879 - | hypothetical protein SCO1906 2042451 - 2040979 - | secreted protein SCO1907 2044163 - 2042736 - | hypothetical protein SCO1908 2044380 - 2046221 + | large secreted protein SCO1909 2046959 - 2046252 - | hypothetical protein TERM 530 2047098 - 2047058 - R 93 -23.4 -2.87211 | gap 1, overlap 2047060 ACCGGTGGGGAGACA CAT-GGGGCGAGGGGCCCC GTCC GGGGCCCCTCGCCCGTATG CCGTTCCCGTGCGCG TERM 531 2047095 - 2047060 - R 90 -21.8 -2.98823 | overlap 2047058 CGGTGGGGAGACACA TGGGGCGAGGGGCCCC GTCC GGGGCCCCTCGCCCGT ATGCCGTTCCCGTGC SCO1910 2047614 - 2047117 - | alanine-rich protein TERM 532 2047264 - 2047318 + g 70 -12.5 -3.40403 | overlap 2047212 2047297 CGCGTGCGGCTCCGC GGCGCTCTTGGCCCGGCCCGCCTTG GCGTG CGCGGCGTGCCCGGCCCGGCCCGCC TTGTCGTGCGCGGCG TERM 533 2047297 - 2047351 + g 100 -22.6 -3.4072 | overlap 2047264 CGCCTTGGCGTGCGC GGCGTGCCCGGCCCGGCCCGCCTTGT CGT GCGCGGCGTGCCCGGCCCGGCCCGCC TTGTCGTGCACGGTG SCO1911 2048108 - 2047611 - | integral membrane protein TERM 534 2049016 - 2049074 + G 82 -19.5 -2.78596 | gap 2, opp_overlap 2049068 CTCGGCGCGCTGGGC CTGCCGGCGGGC--CCGGTCCGCGCACCG CTG CGGTCCGCGGACCGGGAGACCACCGCCGG TCTGCTGGCGGCCTA SCO1912 2048176 - 2049129 + | dihydrodipicolinate synthase SCO1913 2049380 - 2049114 - | small membrane protein SCO1914 2049519 - 2049689 + | hypothetical protein SCO1915 2049745 - 2050473 + | hypothetical protein SCO1916 2051513 - 2050524 - | transferase SCO1917 2052116 - 2051523 - | hypothetical protein SCO1918 2052436 - 2052116 - | integral membrane protein TERM 535 2052510 - 2052487 - R 100 -19.6 -4.0162 | opp_overlap 2052487 TGCGGACATGAGAAA CGGCGGCACC CGAA GGTGCCGCCG TTCTCCGAGACGGTG TERM 536 2052487 - 2052510 + r 91 -19.6 -3.28924 | opp_overlap 2052487 TGCGGACATGAGAAA CGGCGGCACC CGAA GGTGCCGCCG TTCTCCGAGACGGTG SCO1919 2052887 - 2052555 - | hypothetical protein SCO1920 2053354 - 2052884 - | hypothetical protein TERM 537 2053291 - 2053304 + g 71 -9.5 -3.85864 | CGCCATCCCGCAAGC CCCGC CCGT GCGGG TTCTTGTAGTGGTCC SCO1921 2054628 - 2053372 - | aminotransferase SCO1922 2055389 - 2054625 - | ABC transporter ATP-binding subunit SCO1923 2055714 - 2055397 - | dioxygenase ferredoxin subunit SCO1924 2056895 - 2055711 - | hypothetical protein SCO1925 2058377 - 2056956 - | hypothetical protein SCO1926 2059132 - 2058374 - | DNA-binding protein SCO1927 2059304 - 2060092 + | aminoglycoside acetyltransferase SCO1928 2060169 - 2061092 + | ABC transporter, ATP-binding subunit SCO1929 2061089 - 2061898 + | integral membrane transport protein SCO1930 2061905 - 2062975 + | integral membrane transport protein SCO1931 2063709 - 2062930 - | hypothetical protein TERM 538 2062987 - 2063035 + g 79 -14.5 -3.64822 | gap 1, overlap 2063029 GTAGCCACGGGTCAG CTCCGCGCGGCGGGCGGTCCAC TCCCCC GTG-ACCGCGGGCCGCGCGCGG TTTCCGTACCGCCGT SCO1932 2064819 - 2063713 - | hypothetical protein TERM 539 2064735 - 2064763 + g 73 -17.5 -2.59431 | overlap 2064732 CCTCGGTGCGGGCCA GCTGGGCCTCG AAGGTGC CGAGGCCCAGC TCCGTTCTCAGGACG TERM 540 2064846 - 2064903 + r 76 -16 -3.17212 | overlap 2064828 GCGCTGGGACCGAGC GCCGCGCGGCTCGTGTGCCGTGCGGC CCGCAC GACTCGCGGTCCGCGTGCCTCGCGGC TTCCTACGGTCCTAA SCO1933 2065368 - 2064934 - | hypothetical protein TERM 541 2065380 - 2065333 - G 100 -26.5 -3.83502 | gap 2 GACGGGTAGATCAAA CGGCGACGGGCGGGGTGCGTGGC CTTG ACCACGCACCCCGCC-GTC-CCG GAGGGGTCTCAGCGC SCO1934 2066411 - 2065389 - | cytochrome oxidase assembly factor TERM 542 2067568 - 2067537 - g 72 -14.4 -3.33261 | gap 1 CCCGAACGCGCAGAA CACCGAG-GCCGCGC ACG GCTCGGCGCTCGGCG ACGACGAGGTCGCGG SCO1935 2066713 - 2068800 + | transketolase TERM 543 2069778 - 2069760 - g 70 -16 -2.63102 | ACCACGGCGAGATCA CCGGCGAC GCC GTCGCCGG GTCGTACGAGCGGGC SCO1936 2068835 - 2069953 + | transaldolase TERM 544 2069987 - 2070029 + G 84 -20.7 -2.74523 | opp_overlap 2069971, overlap 2069986 2069991 CCGCTGCGTGACCCC GCAGACC-GACGGCTCCCGCG CAT CGCGGG-GCCGTCGGGTCTGG TCATCTTCGGCGTCA TERM 545 2069991 - 2070024 + G 83 -20.3 -2.86432 | gap 1, overlap 2069987 2069986 TGCGTGACCCCGCAG ACCGACGGCTCCCGCG CAT CGCGGG-GCCGTCGGG TCTGGTCATCTTCGG SCO1937 2069957 - 2071480 + | glucose-6-phosphate 1-dehydrogenase TERM 546 2071734 - 2071677 - g 82 -18.4 -3.14132 | CCTCGTCGTCATCAA GCGGGTCTCG-CGCTCGCCCCGGGACCG CACC CGGTCCCGGCTCGA-CGCCGAGGTCCGC CTCGGCGCGGACGCG SCO1938 2071477 - 2072532 + | hypothetical protein SCO1939 2072529 - 2073314 + | 6-phosphogluconolactonase TERM 547 2073359 - 2073331 - T 73 -13.8 -3.37056 | gap 1 ACCACGTACGGAGAA CGCCGGGTTCCGC GAGT GCGGG-CCCGGCG TTCCGCCGTGCTGGG SCO1940 2074144 - 2073377 - | secreted protein SCO1941 2075203 - 2074235 - | integral membrane protein pgi 2076968 - 2075313 - | glucose-6-phosphate isomerase SCO1943 2077419 - 2077084 - | electron transport protein secG 2077941 - 2077633 - | preprotein translocase subunit SecG TERM 548 2077948 - 2077914 - G 84 -21.5 -2.72839 | overlap 2077901 2077904 AACGACGGTGAACGA CGGGGGCACGGTGAC AGCAG GCCACCATGCCCCCG CAAGGGTACGACGTA tpiA 2078791 - 2078015 - | triosephosphate isomerase pgk 2080008 - 2078797 - | phosphoglycerate kinase SCO1947 2081153 - 2080143 - | glyceraldehyde-3-phosphate dehydrogenase TERM 549 2080343 - 2080362 + g 75 -12.8 -3.61398 | ACAGGATGCCCTTGA GGTCGCCG TCGT CGGCGGCC TTCTTGAACGCGGCG TERM 550 2081319 - 2081342 + r 72 -5.2 -4.4078 | gap 1, overlap 2081320 GGGTACGGACCGCCC TGGGCGA-CGG GGA CCGATCACCCG TTTTGGTTACACCGG SCO1948 2084380 - 2081381 - | zinc-binding carboxypeptidase SCO1949 2084563 - 2084468 - | hypothetical protein TERM 551 2084531 - 2084495 - G 93 -20.2 -3.65313 | gap 1, opp_overlap 2084495 2084492 CAAGGACACGCGAAA GCCGGTACCGGTCACCC AAGT GGGCG-CCGGCACCGGC TCGTTGTCCTCGTTC SCO1950 2085561 - 2084575 - | hypothetical protein TERM 552 2085456 - 2085499 + g 73 -10.8 -3.86015 | gap 1 TGCGTCCGCTCACCA GGTGGAGGCCGCCGGCGAACC GCA GGA-CGGCGGAGACCTCCGCC TTTCTGCAGCAGGTC SCO1951 2086649 - 2085558 - | hypothetical protein SCO1952 2087673 - 2086657 - | hypothetical protein uvrC 2089856 - 2087670 - | excinuclease ABC subunit C SCO1954 2090209 - 2091159 + | hypothetical protein SCO1955 2091602 - 2091177 - | iron sulphur binding protein SCO1956 2091825 - 2092931 + | LacI family transcription regulator SCO1957 2092928 - 2093836 + | fructokinase TERM 553 2093865 - 2093844 - T 87 -11.5 -4.18018 | CCGCCTGACGGAAAA CGGCCGCTG CCGG CACCGGCCG CAGCTTCGGCTTCGG uvrA 2097318 - 2094274 - | excinuclease ABC subunit A TERM 554 2097347 - 2097367 + H 81 -12.5 -3.87815 | opp_overlap 2097346 2097345 2097349 TTTCTTGAGAGAAGT GACAGGGGC GGG GCCCCCGTC TTTCTCAGACTAGGG SCO1959 2097542 - 2098228 + | mycothiol-dependent maleylpyruvate isomerase TERM 555 2098272 - 2098243 - f 100 -22.9 -3.14132 | GGTCCCGGTCAGCAA CCGGGAGGCAGCC TGCC GGCCGCCTCCCGG CGCTAGGCTGGCCGT SCO1960 2098289 - 2098945 + | hydrolase SCO1961 2099622 - 2099149 - | 3-dehydroquinate dehydratase SCO1962 2100813 - 2099713 - | ionic transporter SCO1963 2101947 - 2100946 - | integral membrane export protein TERM 556 2100986 - 2101012 + g 72 -11.5 -3.61398 | gap 1, overlap 2100988 GTGTCGTCGCCCCCG GC-GGCCGCCGC TTCC GCCGCGGCCTGC TTCTTCGAGGCGCGG TERM 557 2102238 - 2102183 - R 87 -11.6 -4.287 | AAATAAAGCTCAAAA GGCCAGTTCGGAGCCGGTCACCGATC CCAT GACCGGCGGGCGGCGGCGACCTGGGC GAGCACCTGCTGGAG SCO1964 2104215 - 2102200 - | export associated protein SCO1965 2104918 - 2104340 - | export associated protein SCO1966 2107199 - 2105061 - | excinuclease ABC subunit B SCO1967 2108117 - 2107239 - | integral membrane protein SCO1968 2108409 - 2109278 + | secreted hydrolase SCO1969 2109316 - 2109870 + | DNA-methyltransferase SCO1970 2110338 - 2109895 - | dioxygenase SCO1971 2110465 - 2111370 + | hypothetical protein SCO1972 2111367 - 2112302 + | sugar kinase SCO1973 2113110 - 2112316 - | hypothetical protein SCO1975 2115132 - 2114500 - | hypothetical protein TERM 558 2115517 - 2115501 - g 71 -15.1 -3.15574 | opp_overlap 2115499 2115498 2115516, overlap 2115490 2115499 TGAACGCGATCAACA CGGCCGC GGT GCGGCCG GCCTTCATGTCCGTG SCO1976 2115347 - 2115826 + | integral membrane protein SCO1977 2115989 - 2117479 + | putative oxidoreductase SCO1978 2117905 - 2117630 - | AbaA-like protein SCO1979 2118766 - 2117906 - | DNA-binding protein TERM 559 2118474 - 2118511 + g 71 -6.7 -4.18934 | TACAGCGAGAACCAG CCGGGGAGGATGTCGTG GAAG CGCTGCCACCACCCCGG TTTGTTGGCGTCCTC TERM 560 2118567 - 2118543 - G 74 -11.3 -3.73775 | GCCAGCTGGACGAAA GCGTCGGCCTC CTC GTCGCCGACGC CGTAGGCCTTCAGCA TERM 561 2119124 - 2119168 + G 74 -14.2 -3.57144 | gap 1, opp_overlap 2119088, overlap 2119125 CCTCGGTGCCGCCAT GGGAGCCGGCGCTTCGGGAGC CGCC GCCGCCGA-GCGCCGGTTCCG TTTCGAGCTGGCCGC TERM 562 2119125 - 2119167 + G 74 -17.7 -2.74144 | gap 1, opp_overlap 2119088, overlap 2119124 CTCGGTGCCGCCATG GGAGCCGGCGCTTCGGGAGC CGCC GCCGCCGA-GCGCCGGTTCC GTTTCGAGCTGGCCG SCO1980 2119050 - 2119763 + | hypothetical protein SCO1981 2119760 - 2120194 + | hypothetical protein SCO1982 2120395 - 2120213 - | hypothetical protein SCO1983 2121240 - 2120551 - | hypothetical protein SCO1984 2122775 - 2121378 - | hydrolase SCO1985 2124631 - 2122775 - | integral membrane protein TERM 563 2123443 - 2123398 - G 74 -17.5 -2.73994 | overlap 2123395 ACCCGGCGAAGAGCA GCGCCCCGAGCACCGTCCCGG CGGC CCGGCACAGCACCCGGGACAC GAGCGGGCCGAGGTC SCO1986 2125581 - 2124799 - | hypothetical protein SCO1987 2125668 - 2126168 + | hypothetical protein SCO1988 2126165 - 2126716 + | hypothetical protein SCO1989 2127773 - 2126802 - | aminopeptidase SCO1990 2128541 - 2127828 - | hypothetical protein TERM 564 2128793 - 2128770 - g 88 -21 -3.06162 | overlap 2128749 CACCGGACCCGAAGA CGGCGGCGGC GATC GCCGCCGCCG AGGCGGCCGGGCCGC SCO1991 2128658 - 2129218 + | hypothetical protein SCO1992 2129776 - 2129270 - | integral membrane protein SCO1993 2130524 - 2129838 - | hypothetical protein SCO1994 2130596 - 2130952 + | integral membrane protein SCO1995 2131341 - 2130961 - | hypothetical protein SCO1996 2131993 - 2131391 - | dephospho-CoA kinase SCO1997 2132964 - 2132026 - | hypothetical protein TERM 565 2133068 - 2133041 - R 93 -22.8 -3.09015 | opp_overlap 2133025, overlap 2133058 GGGAGACGCACTGAA GGGGCCGCACCT CGAA AGGTGCGGCCCC TCAGTCAACCGTCGT rpsA 2134629 - 2133121 - | 30S ribosomal protein S1 SCO1999 2135154 - 2135816 + | hypothetical protein SCO2000 2135883 - 2138879 + | ATP-binding RNA helicase TERM 566 2138919 - 2138861 - T 76 -15.9 -3.2614 | opp_overlap 2138891, overlap 2138880 GACCCGGTACACGAA GGCCCGGCTCGGCAA-GTGACCGCGGCCC GGC GGGGCGCGGTGGCCTCGCCGGGC-GGACC GCGGCGGTGCCTACG TERM 567 2138923 - 2138880 - T 78 -18 -2.52464 | gap 1, opp_overlap 2138891, overlap 2138861 CGGCTCGGCAAGTGA CCGCGGCCCGGCGGGGCGCGG TGG CCTCGCCGGGC-GGACCGCGG CGGTGCCTACGCCTC SCO2001 2140723 - 2138930 - | secreted protein TERM 568 2139452 - 2139488 + g 73 -14.9 -3.21099 | GCCGGTCTGCTCGCC CGCCACCAGCGCGGGCG CGA CGGCCACGCCGGAGGCG TTGGTGGTGACCGCG TERM 569 2140888 - 2140913 + r 78 -8.9 -4.41348 | overlap 2140890 CAGTTCGACCAGTAC GGTGCCGCAGG CGAC CCTACGGCAAC TTTCTTTGCACGGGC SCO2002 2141398 - 2141042 - | hypothetical protein SCO2003 2144382 - 2141659 - | DNA polymerase I SCO2004 2144639 - 2146918 + | formate dehydrogenase TERM 570 2146979 - 2146935 - f 75 -15.6 -3.05384 | gap 1, overlap 2146905 CGTTTGCTCAGCGAA GCGGCCGGCCGGCCG-ACGCC TCCG AGCGTGCGCCCGGCCGGCGGA CACGCAGACGGATCG SCO2005 2146962 - 2147501 + | hypothetical protein SCO2006 2147859 - 2148404 + | hypothetical protein TERM 571 2148871 - 2148851 - g 81 -4.5 -4.67234 | opp_overlap 2148853 2148858, overlap 2148853 ACGGAATGTGAAAAA GCGCCCCGG AAT CCCGGACTC CCTTTCCTGGATGTA SCO2007 2148401 - 2148997 + | hypothetical protein TERM 572 2149017 - 2149007 - f 73 -6.8 -4.35742 | AGGTAATCACCAAAA CGTC CCA GACG CCTGAACCGGACCGG TERM 573 2149558 - 2149515 - g 84 -13.2 -4.09963 | gap 1, overlap 2149518 GGCCAACAAGAACAA GACCGTCGAGGGCGTC-ACCT TCA AGGTCGAAGCGCTCGACGACC AGGGCCAGCCCTCCG SCO2008 2149264 - 2150520 + | branched chain amino acid binding protein SCO2009 2150635 - 2151567 + | branched chain amino acid transport permease SCO2010 2151573 - 2153399 + | branched chain amino acid transport permease SCO2011 2153405 - 2154334 + | branched chain amino acid transport ATP-binding protein SCO2012 2154331 - 2155047 + | branched chain amino acid transport ATP-binding protein SCO2013 2155779 - 2155123 - | two-component system response regulator SCO2014 2157773 - 2156337 - | pyruvate kinase SCO2015 2157990 - 2159798 + | nucleotidase SCO2016 2161229 - 2159817 - | monooxygenase SCO2017 2162584 - 2161226 - | amino acid decarboxylase SCO2018 2165253 - 2162746 - | aminopeptidase TERM 574 2165351 - 2165404 + r 70 -14.4 -3.2614 | gap 1 CCCGGCGTGCGCCCC CGTGGGCGGGGGCGCACCCGGTCTC AGTCG GTGGCCGG-TGCGCCGCCGGCGGCG TTGCTCTCCGCGATG SCO2019 2165724 - 2165374 - | chorismate mutase SCO2020 2165859 - 2166758 + | hypothetical protein SCO2021 2166835 - 2167428 + | hypothetical protein SCO2022 2168234 - 2167476 - | hypothetical protein SCO2023 2168433 - 2169291 + | hypothetical protein SCO2024 2169305 - 2170222 + | chitosanase (secreted protein) TERM 575 2170277 - 2170302 + T 70 -9.7 -3.75766 | overlap 2170278 GGCAGGCGCCATCAG TGTTCCGCACG CCTT TGTGCGGGACG TTCTTCGGTTGTCCG gltD 2171847 - 2170384 - | glutamate synthase subunit beta SCO2026 2176384 - 2171840 - | glutamate synthase large subunit TERM 576 2173342 - 2173367 + g 75 -13.3 -3.66018 | CGGAGACCAGCTTGA CGTGAATCCGC GCCT GCGGGTTCGCG TTCTTCAGGTCGTGG SCO2027 2177557 - 2176826 - | hypothetical protein TERM 577 2178442 - 2178479 + G 76 -18.3 -2.52896 | GGCGCGCTGTCTGCG CCGCGCGCTGACGGCGG CCCA CCGCGGCGAGCGCGCGG TGCGTTCCGCGGTGG SCO2028 2177792 - 2179321 + | hypothetical protein TERM 578 2180331 - 2180376 + G 86 -21.1 -2.9914 | gap 1 CGCCCTCGCCCTGAC CGTCGCCGCCCGGGGCCGCCTC GCG GAGACGGTCCCGG-CGGCGGCC TGTCTGTCCCGGGTC SCO2029 2179318 - 2180595 + | secreted protein SCO2030 2180592 - 2181770 + | hypothetical protein SCO2031 2181758 - 2183161 + | hypothetical protein SCO2032 2183119 - 2184333 + | hypothetical protein SCO2033 2184330 - 2185154 + | citrate lyase beta chain TERM 579 2185168 - 2185214 + T 100 -28.2 -3.01924 | gap 1, opp_overlap 2185194, overlap 2185171 GAACCCCGGCCCCGG CATA-CGCCGAGGGCGCCCGG AGAGTA CCGGGCGCCCTCGGCGGTGTG TCTTGCGGGCGGGTC TERM 580 2185171 - 2185210 + T 100 -27.9 -3.09273 | opp_overlap 2185194, overlap 2185168 CCCCGGCCCCGGCAT ACGCCGAGGGCGCCCGG AGAGTA CCGGGCGCCCTCGGCGG TGTGTCTTGCGGGCG SCO2034 2186259 - 2185228 - | prolipoprotein diacylglyceryl transferase TERM 581 2186105 - 2186137 + g 75 -12.5 -3.61398 | GCGATGTCGGCCACC GTGCCCGGCCGCCCG CCC CGGGCGACCCAGCGC TTGTTGCCGAGCCAG SCO2035 2187163 - 2186336 - | hypothetical protein TERM 582 2187154 - 2187122 - G 100 -27.1 -2.58249 | overlap 2187125 CACACCCCGCAGAAC GAACCGGGGAGGCGC AGC GCGCCTCCCCGGTCC CAGGTCCACTCGTAC TERM 583 2187151 - 2187125 - G 100 -25.2 -3.44325 | overlap 2187122 ACCCCGCAGAACGAA CCGGGGAGGCGC AGC GCGCCTCCCCGG TCCCAGGTCCACTCG trpA 2188026 - 2187211 - | tryptophan synthase subunit alpha SCO2037 2189306 - 2188023 - | tryptophan synthase subunit beta SCO2038 2189612 - 2189421 - | hypothetical protein trpC 2190442 - 2189633 - | indole-3-glycerol-phosphate synthase SCO2040 2191006 - 2190560 - | hypothetical protein SCO2041 2191360 - 2191109 - | hypothetical protein SCO2042 2192140 - 2191505 - | hypothetical protein TERM 584 2192206 - 2192246 + r 77 -17.6 -2.87564 | gap 1, opp_overlap 2192198 2192197, overlap 2192198 2192235 TGAGAATCGCCCCAC CGGTCCGACCGGTTGGCCC TATT GCGCCAGCCGGTTGG-CCG TGTGTACGGCCCTCA SCO2043 2193732 - 2192224 - | anthranilate synthase component I hisI 2194130 - 2193744 - | phosphoribosyl-AMP cyclohydrolase SCO2045 2194212 - 2194847 + | hypothetical protein SCO2046 2196012 - 2194858 - | integral membrane efflux protein SCO2047 2196709 - 2196122 - | DNA-binding protein TERM 585 2196770 - 2196727 - R 75 -17.1 -2.63596 | opp_overlap 2196738, overlap 2196738 GGCCAGGCTAGATTA CGAAAGAAAAATTGCGCAA TGGATG TTGCGCAATTTTTCTTTCT CGAATCGCCGTCCGC TERM 586 2196759 - 2196738 - R 100 -8.8 -5.34309 | opp_overlap 2196738, overlap 2196727 ATTACGAAAGAAAAA TTGCGCAA TGGATG TTGCGCAA TTTTTCTTTCTCGAA TERM 587 2196738 - 2196759 + r 100 -9.5 -5.38054 | opp_overlap 2196738 2196727 ATTACGAAAGAAAAA TTGCGCAAT GGAT GTTGCGCAA TTTTTCTTTCTCGAA SCO2048 2197548 - 2196793 - | imidazole glycerol phosphate synthase subunit HisF SCO2049 2197949 - 2197545 - | hypothetical protein SCO2050 2198688 - 2197966 - | 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase hisH 2199374 - 2198706 - | imidazole glycerol phosphate synthase subunit HisH SCO2052 2200132 - 2199539 - | imidazoleglycerol-phosphate dehydratase SCO2053 2201238 - 2200129 - | histidinol-phosphate aminotransferase TERM 588 2200189 - 2200228 + g 73 -15.7 -3.28712 | gap 1 CGCGTCGTTCTCCTC CGGAGTGCCGGCGGTGAC CCGCA GCCACC-CCGGCACGCCG TTGTCCCGGACCAGG hisD 2202560 - 2201235 - | histidinol dehydrogenase SCO2055 2202760 - 2204337 + | hypothetical protein SCO2056 2204605 - 2205735 + | hypothetical protein SCO2057 2205747 - 2206487 + | hypothetical protein SCO2058 2206501 - 2207010 + | transcriptional regulatory protein SCO2059 2207858 - 2207142 - | hypothetical protein SCO2060 2208813 - 2207893 - | integral membrane transport protein SCO2061 2209799 - 2208825 - | ABC transport ATP-binding subunit SCO2062 2211178 - 2209967 - | hypothetical protein SCO2063 2211403 - 2211570 + | small hydrophilic protein TERM 589 2211610 - 2211584 - T 100 -25.2 -3.22774 | overlap 2211567 GACAGCCACGACGAA GGGCGCACCCGG CAA CCGGGTGCGCCC TCGCTCGTCGTGGTC dnaE 2215176 - 2211637 - | DNA polymerase III subunit alpha SCO2065 2215379 - 2216719 + | hypothetical protein TERM 590 2216922 - 2216949 + G 73 -14.8 -3.21747 | TCCGCTGCCGCTGCC CACGGTGGCCGC CGTC GCCGCCGCCGTG TTCCTGATCGCGTAC SCO2066 2216806 - 2217516 + | hypothetical protein SCO2067 2217614 - 2218414 + | hypothetical protein SCO2068 2218545 - 2220200 + | secreted alkaline phosphatase SCO2069 2220775 - 2220185 - | hypothetical protein TERM 591 2220253 - 2220224 - G 74 -16.5 -3.1706 | gap 1 AAGGGACTCGAGGAA GCCGAGCGCCACCC GCC AGGTGGC-CTCGGC CGCCTCCGCGTCGTA SCO2070 2220881 - 2222029 + | hypothetical protein SCO2071 2223637 - 2222051 - | Na+/H+ antiporter SCO2072 2224208 - 2223726 - | hypothetical protein SCO2073 2225155 - 2224211 - | ribosomal large subunit pseudouridine synthase lspA 2225895 - 2225281 - | lipoprotein signal peptidase SCO2075 2226683 - 2225964 - | DNA-binding protein ileS 2227237 - 2230380 + | isoleucyl-tRNA synthetase TERM 592 2230391 - 2230437 + T 100 -26.7 -3.64703 | gap 1, overlap 2230395 AGTAGCCACCTGGCA GCACCTGGGCCCGGCCTCCCTC GCAT GAGGGGCGCCGGGCCCAG-TGC TTTCCGTCGCGGGGC TERM 593 2230395 - 2230434 + T 100 -27.2 -2.94144 | overlap 2230391 GCCACCTGGCAGCAC CTGGGCCCGGCCTCCCTC GCAT GAGGGGCGCCGGGCCCAG TGCTTTCCGTCGCGG TERM 594 2230548 - 2230513 - T 100 -32 -3.51924 | overlap 2230536 GCTGCATGGACACAA GGGCGGGCCCCGGGTT CAGA AACCCGGGGCCCGCCC TGAACGTTGCCGAAG SCO2077 2231778 - 2230582 - | hypothetical protein SCO2078 2232118 - 2231834 - | hypothetical protein TERM 595 2232150 - 2232173 + r 73 -10.9 -3.80018 | overlap 2232152 TCCCCTGAACCATCT CTCGGGCCC TGTCCC GGGCCCGTG TTCTTGCTCTGTACC SCO2079 2232841 - 2232200 - | hypothetical protein SCO2080 2233689 - 2232970 - | hypothetical protein SCO2081 2234424 - 2233696 - | hypothetical protein TERM 596 2234398 - 2234352 - G 87 -19.5 -3.05384 | gap 1, opp_overlap 2234389 GCTCCTCGTACGGAA CGGCGCTCACTCC-GCCCCACC TGTC GGTGAAGCCGAAGTGCGCGCCG TTCACGGTGTCGCGC SCO2082 2235620 - 2234421 - | cell division protein FtsZ SCO2083 2236703 - 2235909 - | sporulation protein murG 2237823 - 2236729 - | N-acetylglucosaminyl transferase SCO2085 2239200 - 2237830 - | cell division protein murD 2240693 - 2239278 - | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase mraY 2241793 - 2240702 - | phospho-N-acetylmuramoyl-pentapeptide-transferase SCO2088 2243208 - 2241793 - | putative UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate- D-alanyl-alanyl ligase TERM 597 2243133 - 2243080 - G 73 -15.1 -3.19157 | gap 1, opp_overlap 2243110 CACGAAGGCGACGAA GAGGCTGCCGGGCCCGGCTTCCCGGG AGT CCCGGACGACCGG-CCCGGTGACCTC GGCGGACGCGTCCGG SCO2089 2244789 - 2243269 - | putative UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase SCO2090 2246961 - 2244997 - | cell division protein TERM 598 2246881 - 2246937 + g 74 -16.4 -3.12351 | GCCGGGTCCCGGGCG GCGCC-CGCCGCCGGAGCGGACGGGCCT CGC GGGTCCGGGCAC-CCGGCGGCGCGGCGG TTCCCTGTCGGACAC SCO2091 2247578 - 2246958 - | hypothetical protein SCO2092 2248617 - 2247685 - | hypothetical protein SCO2093 2249114 - 2249617 + | hypothetical protein SCO2094 2249934 - 2250947 + | regulatory protein SCO2095 2250944 - 2252308 + | hypothetical protein SCO2096 2252305 - 2254698 + | hypothetical protein TERM 599 2254700 - 2254741 + T 84 -19.4 -2.87564 | gap 1 ACCAGCAGGGCTGAG CCGAACGGG-CGCCGACCC CACGC GGGTCGGCGCCCCGGCCGG TGTCTCGGGGCGTCG TERM 600 2254772 - 2254820 + T 100 -33.4 -2.82516 | ACGGGCGCTCATGGG TACGCGTGAGGGGGTGACCACC CGGAC GGTGGTCACCCCCTCACGCGCA TGTGCTGGTGAGCGG SCO2097 2255257 - 2254850 - | hypothetical protein TERM 601 2254890 - 2254918 + g 74 -8.8 -4.11235 | CTGCGGCGCTGCCAG CGCTCGTCGATG CGGTC CATCATCGAGCG TTTCTGTCGTCCTTG SCO2098 2256349 - 2255534 - | methyltransferase SCO2099 2256540 - 2257046 + | hypothetical protein SCO2100 2257287 - 2257916 + | transcriptional regulator TERM 602 2257989 - 2258041 + F 87 -17.7 -3.44051 | gap 2, opp_overlap 2257991, overlap 2257990 CGGCGGTGCACGAAG AACGCCGGTCCG-TGGTGGC-CGCG TCCCC CGCGGGCCGCCGTCGGACCGGCGCC TTCTCCTGCTCCCCC TERM 603 2257990 - 2258040 + F 88 -21.2 -2.66216 | gap 2, opp_overlap 2257991, overlap 2257989 GGCGGTGCACGAAGA ACGCCGGTCCG-TGGTGGC-CGCG TCCCC CGCGGGCCGCCGTCGGACCGGCGC CTTCTCCTGCTCCCC TERM 604 2258039 - 2257991 - f 95 -20.3 -3.71848 | gap 2, opp_overlap 2257990 2257989 GCGGTGCACGAAGAA CGCCGGTCCG-TGGTGGC-CGCG TCCCC CGCGGGCCGCCGTCGGACCGGCG CCTTCTCCTGCTCCC SCO2101 2258402 - 2259922 + | carotenoid dehydrogenase (secreted protein) SCO2102 2260936 - 2259944 - | hypothetical protein SCO2103 2261916 - 2260993 - | 5,10-methylenetetrahydrofolate reductase thiE 2262726 - 2262055 - | thiamine-phosphate pyrophosphorylase TERM 605 2262478 - 2262505 + g 72 -12 -3.64703 | gap 1, overlap 2262456 2262478 GGCCGCGTGCGCGAC G-TCCGCGCGGTC GTT GACCGCGAGGAGC TTTCCGTGGCGGGCG SCO2105 2263246 - 2262881 - | transcriptional regulatory protein SCO2106 2264511 - 2263288 - | oxidoreductase SCO2107 2264828 - 2266033 + | oxidoreductase SCO2108 2266030 - 2266230 + | hypothetical protein thiG 2266233 - 2267027 + | thiazole synthase TERM 606 2268957 - 2268912 - g 72 -16 -2.82635 | ACTCGGAGTACGACA GCGGCCGGGTGGCCCGGC AGACGCCGGA GCCGGGCGGCCGGGCCGC CGAGGGGGACACGGT SCO2110 2267186 - 2269189 + | serine/threonine protein kinase SCO2111 2269374 - 2270258 + | endonuclease SCO2112 2270952 - 2270305 - | hypothetical protein SCO2113 2271144 - 2271647 + | bacterioferritin SCO2114 2271915 - 2271664 - | hypothetical protein TERM 607 2272040 - 2271998 - R 80 -12 -4.09739 | gap 1, opp_overlap 2272003 2272004 GCAAGGTCGGCAAAA GTGCGA-GGGGCGCGGATC CCGTGT GACCCGCGCCCCATTTCAC CGCCCCGCGATCATG TERM 608 2272003 - 2272034 + r 72 -12.9 -3.53012 | opp_overlap 2271998, overlap 2272004 GTCGGCAAAAGTGCG AGGGGCGCGGATC CCGTGT GACCCGCGCCCCA TTTCACCGCCCCGCG TERM 609 2272004 - 2272033 + r 72 -16.4 -2.71712 | opp_overlap 2271998, overlap 2272003 TCGGCAAAAGTGCGA GGGGCGCGGATC CCGTGT GACCCGCGCCCC ATTTCACCGCCCCGC SCO2115 2273425 - 2272073 - | 2-dehydro-3-deoxyphosphoheptonate aldolase TERM 610 2275831 - 2275799 - g 72 -14.7 -3.38291 | overlap 2275791 CCTACAACGCGATAA CGACGCTGACGGCGC TGC GCGCCGACGGCACCG GCGACATGGTGGCCC SCO2116 2273596 - 2276427 + | secreted protein TERM 611 2276614 - 2276647 + F 100 -18.9 -4.07687 | gap 1, opp_overlap 2276614, overlap 2276617 2276618 GCGCGCGACTCAAGA CTCGCGAAGGCCGCCC GAG GGGCGGCCTTCG-GTG TTTTCGAGCCCGGGT TERM 612 2276647 - 2276614 - f 85 -18.9 -3.08679 | gap 1, opp_overlap 2276614 2276617 2276618 GCGCGCGACTCAAGA CTCGCGAAGGCCGCCC GAG GGGCGGCCTTCG-GTG TTTTCGAGCCCGGGT TERM 613 2276617 - 2276645 + F 95 -20.3 -3.63744 | opp_overlap 2276614, overlap 2276614 2276618 CGCGACTCAAGACTC GCGAAGGCCGCCC GAG GGGCGGCCTTCGG TGTTTTCGAGCCCGG TERM 614 2276618 - 2276644 + F 93 -23.8 -2.78032 | opp_overlap 2276614, overlap 2276617 2276614 GCGACTCAAGACTCG CGAAGGCCGCCC GAG GGGCGGCCTTCG GTGTTTTCGAGCCCG SCO2117 2276703 - 2278607 + | anthranilate synthase SCO2118 2279554 - 2278559 - | D-lactate dehydrogenase SCO2119 2280666 - 2279638 - | 6-phosphofructokinase TERM 615 2280357 - 2280403 + g 71 -12.8 -3.54029 | CGACGCCGAGGGTGT CCTCGCCGCCGATGGTGATGAG GGC CTCGACGCCGAGTGCGGCGAGG TTGTCCTTGATGCGC SCO2120 2281365 - 2280718 - | two-component system regulator SCO2121 2282674 - 2281433 - | two-component system sensor kinase SCO2122 2283503 - 2282715 - | hypothetical protein SCO2123 2283639 - 2284442 + | esterase/lipase SCO2124 2284435 - 2285052 + | hypothetical protein SCO2125 2285838 - 2285077 - | hypothetical protein SCO2126 2286936 - 2285983 - | glucokinase SCO2127 2287566 - 2286991 - | hypothetical protein SCO2128 2288911 - 2287637 - | hypothetical protein TERM 616 2288973 - 2289021 + r 71 -15.7 -2.61274 | overlap 2288943 2288988 CTGCCCGCAGCTACG GCGGGCTCGGCCGCCCGCGGTTG CGT CGGCGGCGGCCGCCCGCGGCCGC GTTACTTCGACTCGA TERM 617 2288988 - 2289022 + r 73 -14.3 -3.35813 | gap 2, overlap 2288943 2288973 GCGGGCTCGGCCGCC CGCGGTTGCGTCGGCGG CGG CCGCC--CGCGGCCGCG TTACTTCGACTCGAC SCO2129 2289457 - 2289023 - | hypothetical protein SCO2130 2290392 - 2289595 - | hypothetical protein SCO2131 2290703 - 2292499 + | long chain fatty acid CoA ligase SCO2132 2293725 - 2292487 - | glycosyl transferase SCO2133 2293882 - 2295147 + | integral membrane protein SCO2134 2296332 - 2295175 - | hypothetical protein SCO2135 2297470 - 2296454 - | secreted protein TERM 618 2297606 - 2297567 - R 85 -19.2 -3.01712 | overlap 2297548 2297570 CGGCGCCGCGCAACA CGACGCCCCGCCGCTGAC GCAG GTCACCGGCGGGGCGGGG GGTCACAGGGCCCGG TERM 619 2297603 - 2297570 - R 95 -23.9 -2.73875 | overlap 2297548 2297567 CGCCGCGCAACACGA CGCCCCGCCGCTGAC GCAG GTCACCGGCGGGGCG GGGGGTCACAGGGCC SCO2136 2298750 - 2297707 - | secreted protein TERM 620 2298867 - 2298849 - R 70 -2.3 -4.56597 | opp_overlap 2298850, overlap 2298850 TCCTCCGCCGAAAAA TCACGGT TACGC ACCGCGT TTTCCGCCACAACTC SCO2137 2300325 - 2298982 - | hypothetical protein SCO2138 2300627 - 2300388 - | hypothetical protein SCO2139 2300785 - 2301555 + | integral membrane protein SCO2140 2301552 - 2301833 + | transcriptional regulator SCO2141 2301983 - 2302306 + | small secreted hydrophilic protein SCO2142 2302365 - 2303729 + | two component sensor kinase SCO2143 2303726 - 2304391 + | two component system response regulator TERM 621 2305665 - 2305704 + G 95 -22.2 -3.28924 | gap 1 CGGCGCCGGGGTCAA CCCGGTCGCCGCCG-CG CTCGCCT CGACGGCGGCGGCCGGG TTCTGCCACACGCTC SCO2144 2304481 - 2305890 + | integral membrane transporter SCO2146 2308506 - 2307076 - | aminotransferase SCO2145 2305901 - 2307199 + | glycerate kinase TERM 622 2308837 - 2308792 - TR 95 -20.5 -3.63266 | AAAACCTAGGGGAAA TGATCGGCGTCCCGCAACCCG GGTC CGGATCGCGGGACGCACATCA CACACCAGGGCCGCT trpD 2309915 - 2308851 - | anthranilate phosphoribosyltransferase TERM 623 2309981 - 2310025 + r 95 -24.5 -2.62263 | gap 2 ATCCAGCCCCGGACA CGG-CGAAGGGCCCCG-TCCG CAGAA CGGAACGGGGCCCTTCGACCG TGGTGTGGCGACGCT SCO2148 2311684 - 2310047 - | cytochrome B subunit SCO2149 2312742 - 2311681 - | Rieske iron-sulfur protein SCO2150 2313548 - 2312739 - | cytochrome C heme-binding subunit SCO2151 2314243 - 2313623 - | cytochrome c oxidase subunit III SCO2152 2314453 - 2314854 + | response regulator SCO2153 2316216 - 2314942 - | secreted protein TERM 624 2316294 - 2316329 + r 100 -28.4 -3.21099 | opp_overlap 2316294 CGTACGGCAGACGAA GGGGCCCGGACGCTCC TGGC GGAGTGTCCGGGCCCC TTCGTGCTCGACGCG TERM 625 2316329 - 2316294 - R 100 -26.2 -3.27022 | opp_overlap 2316294 CGTACGGCAGACGAA GGGGCCCGGACGCTCC TGGC GGAGTGTCCGGGCCCC TTCGTGCTCGACGCG SCO2154 2316761 - 2316363 - | integral membrane protein SCO2155 2318494 - 2316758 - | cytochrome c oxidase subunit I SCO2156 2319450 - 2318491 - | cytochrome c oxidase subunit II TERM 626 2319731 - 2319747 + H 70 -9.3 -3.74872 | ACATGTCACAGCCCC GCGCCCC TTG GCGGCGC TTTCCTGCCCTGCGT TERM 627 2320281 - 2320239 - g 74 -16.9 -3.05596 | gap 1, overlap 2320241 GAGGTGGGCACCGAA CAGCCGGTGGCCCGGGTGGC GGAG GCCTGCCGGGCCGCCGG-TG TGCCGCTGCTGGTGG TERM 628 2320280 - 2320241 - g 74 -16.2 -3.08679 | overlap 2320239 GGTGGGCACCGAACA GCCGGTGGCCCGGGTGGC GGAG GCCTGCCGGGCCGCCGGT GTGCCGCTGCTGGTG SCO2157 2319777 - 2321159 + | aminotransferase SCO2158 2322298 - 2321282 - | kinase TERM 629 2321528 - 2321471 - G 70 -13.9 -3.2614 | gap 1, opp_overlap 2321523 CAGTCCCGACAGGAA CCCCG-CGCGGAAGGCGTCGCCGACGCC CGT GGGGTCGGCCTTGCGCTCCTCGTCGGGG ACGCCGACCTCGATG SCO2159 2322389 - 2322598 + | hypothetical protein TERM 630 2322773 - 2322738 - g 70 -13.2 -3.33492 | gap 1, overlap 2322722 2322739 2322741 CGAGCGACCCGACAA CGACGAC-GCCGCCGAC GAG GCCGGCGGCGGGCGTCC CGCGCGGCGGCGCCC TERM 631 2322772 - 2322739 - g 70 -16.7 -2.59881 | gap 1, overlap 2322722 2322738 2322741 GAGCGACCCGACAAC GACGAC-GCCGCCGAC GAG GCCGGCGGCGGGCGTC CCGCGCGGCGGCGCC TERM 632 2323346 - 2323335 - g 75 -3.6 -4.56597 | overlap 2323337 GGCGGCCGCGAAAAA GGCG GCGG CACC GGTGCTGAAGGCGCT SCO2160 2322715 - 2324265 + | large membrane protein TERM 633 2324325 - 2324289 - T 100 -32.4 -3.33492 | CGAGGCATGGCAGAA GGGCGGTGGCCCGGGG ACGAA CCCCGGGCCACCGCCC TTCACGCGCACTCGG SCO2161 2324724 - 2324368 - | hypothetical protein SCO2162 2325064 - 2326248 + | quinolinate synthetase TERM 634 2326270 - 2326312 + T 86 -18.5 -3.28791 | gap 1, opp_overlap 2326272, overlap 2326277 CCCGCGGCGCGAGAG CACTGAG-GGTGTCCCCACC GAGC GGTGGGGACACCTCTCTGCG TTCTGCCGCCGCCGT TERM 635 2326310 - 2326272 - T 85 -19.7 -2.62184 | gap 1, opp_overlap 2326270 2326277 CGCGGCGCGAGAGCA CTGAG-GGTGTCCCCACC GAGC GGTGGGGACACCTCTCTG CGTTCTGCCGCCGCC TERM 636 2326277 - 2326304 + T 90 -21.4 -2.96711 | opp_overlap 2326272, overlap 2326270 CGCGAGAGCACTGAG GGTGTCCCCACC GAGC GGTGGGGACACC TCTCTGCGTTCTGCC SCO2164 2329452 - 2326327 - | integral membrane efflux protein SCO2165 2330315 - 2329632 - | two component system response regulator SCO2166 2331562 - 2330312 - | two component sensor kinase SCO2167 2332011 - 2331727 - | hypothetical protein SCO2168 2332812 - 2332033 - | hypothetical protein SCO2169 2332994 - 2333749 + | integral membrane protein SCO2170 2333833 - 2334534 + | methyltransferase SCO2171 2334636 - 2335724 + | secreted protease SCO2172 2336003 - 2335755 - | hypothetical protein TERM 637 2337357 - 2337325 - g 71 -15 -3.15544 | gap 2 CGCTACCGTGACGAA CTCGGCCGCCTGAACG CGG CGTTC-G-CGGCCGAG TGCGAGCAGGTGCTG SCO2173 2336218 - 2337411 + | adenosylcobinamide kinase/adenosylcobinamide phosphate guanylyltransferase SCO2174 2338170 - 2337400 - | transferase SCO2175 2338274 - 2339347 + | nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase TERM 638 2339344 - 2339372 + T 75 -14.5 -3.33815 | overlap 2339348 CGTGACCGACGGCGA GTAGCCCCGGTCC GGT GGACCGGGGTGGC TTGGTTCCCCGGCAT TERM 639 2339348 - 2339368 + T 78 -18.3 -2.60244 | overlap 2339344 ACCGACGGCGAGTAG CCCCGGTCC GGT GGACCGGGG TGGCTTGGTTCCCCG SCO2176 2340510 - 2339770 - | integral membrane protein SCO2177 2340571 - 2341353 + | cobalamin (5'-phosphate) synthase SCO2178 2342219 - 2341371 - | endo alpha-1,4 polygalactosaminidase TERM 640 2341574 - 2341602 + g 72 -12.3 -3.61398 | overlap 2341571 CGAAGTCGAAGTCGT CGACCAGGTCCGG GAT CTGGTCCAGGTCG TTCTTCAGCCCGACG TERM 641 2342321 - 2342273 - H 72 -15.8 -2.70932 | overlap 2342300 2342301 2342303 TGCCCCCCGGAATGA TCCCCCACCCGCACAGCCGCGG GGAAA CCACGGCCCCGCGGGAGGGAGC GCGCCCGTGCGCGAG SCO2179 2342474 - 2344027 + | aminopeptidase SCO2180 2344272 - 2345732 + | dihydrolipoamide dehydrogenase SCO2181 2345796 - 2347568 + | dihydrolipoamide succinyltransferase TERM 642 2347586 - 2347634 + F 87 -18.1 -3.53012 | gap 1, overlap 2347588 2347590 ACCCTCGCCAGTGGG CCTGTACGGTGCCCCCGCCCGG AAGTTC CCGGGCGGGGGCATCGC-CGTG TTTCGACCGGGGCAC TERM 643 2347588 - 2347632 + F 91 -19.3 -3.34398 | gap 1, overlap 2347586 2347590 CCTCGCCAGTGGGCC TGTACGGTGCCCCCGCCCGG AAGTTC CCGGGCGGGGGCATCGC-CG TGTTTCGACCGGGGC TERM 644 2347590 - 2347631 + F 88 -20.8 -2.60496 | overlap 2347588 2347586 TCGCCAGTGGGCCTG TACGGTGCCCCCGCCCGG AAGTTC CCGGGCGGGGGCATCGCC GTGTTTCGACCGGGG SCO2182 2347778 - 2348401 + | GntR family transcriptional regulator SCO2183 2348740 - 2351439 + | 2-oxoacid dehydrogenase subunit E1 TERM 645 2351455 - 2351490 + F 86 -20.4 -2.81642 | opp_overlap 2351457 2351462 AGGCTCGTCACGACG AACGGAAGGCCCCCGC CCCG GCGGGGGCCTTCCGCG TCTCCTGCATCATGT TERM 646 2351488 - 2351457 - f 100 -27.4 -3.21099 | opp_overlap 2351455, overlap 2351462 GCTCGTCACGACGAA CGGAAGGCCCCCGC CCCG GCGGGGGCCTTCCG CGTCTCCTGCATCAT TERM 647 2351483 - 2351462 - f 86 -18.7 -3.21695 | opp_overlap 2351455, overlap 2351457 TCACGACGAACGGAA GGCCCCCGC CCCG GCGGGGGCC TTCCGCGTCTCCTGC SCO2184 2351510 - 2352493 + | transcriptional regulator SCO2185 2352501 - 2352923 + | hypothetical protein SCO2186 2352920 - 2353624 + | hypothetical protein SCO2187 2354585 - 2353659 - | hypothetical protein SCO2188 2355010 - 2355858 + | peptidase (secreted protein) SCO2189 2356391 - 2355882 - | acetyltransferase TERM 648 2356968 - 2357007 + G 71 -15.6 -3.13403 | gap 1, opp_overlap 2356931 2356928, overlap 2356967 CACGGCACGACGGCG CTCGCGGAGGCCGTCGCCG CGC TGGAG-CGGCCGCCGCGGG TCTTCGTGAACGGCA SCO2190 2356470 - 2357579 + | hypothetical protein SCO2191 2357793 - 2359196 + | oxidoreductase SCO2192 2360720 - 2359257 - | regulator TERM 649 2360231 - 2360277 + g 72 -13.6 -3.40403 | gap 1 GCCGCGGGGTCGCCG GGCGGCCCTGCGCGGGGATGC GGACCG GCACCTCGGCGC-GGGCCACC TTCTCGTCGGGGCGG lipB 2360955 - 2361752 + | lipoyltransferase SCO2194 2361907 - 2362860 + | lipoyl synthase SCO2195 2363105 - 2363320 + | hypothetical protein SCO2196 2363402 - 2364106 + | integral membrane protein SCO2197 2364684 - 2364217 - | integral membrane protein SCO2198 2364905 - 2366314 + | glutamine synthetase I SCO2199 2366476 - 2366745 + | integral membrane protein SCO2200 2367634 - 2366795 - | hypothetical protein SCO2201 2367728 - 2368099 + | hypothetical protein SCO2202 2368178 - 2369092 + | heat shock protein HtpX SCO2203 2369102 - 2369680 + | hypothetical protein TERM 650 2370155 - 2370123 - g 86 -17 -3.63073 | gap 1, overlap 2370126 CAGACTGCTCAAGAA CATGGCGGCGGCCGG GGCA CCGGACGCCGCC-TG GCTGACCGAGGTGGA TERM 651 2370153 - 2370126 - g 81 -19.8 -2.63252 | overlap 2370123 ACTGCTCAAGAACAT GGCGGCGGCCGG GGCA CCGGACGCCGCC TGGCTGACCGAGGTG SCO2204 2369767 - 2370954 + | hypothetical protein SCO2205 2371323 - 2371009 - | hypothetical protein SCO2206 2371456 - 2371857 + | hypothetical protein TERM 652 2372027 - 2372056 + G 82 -19.3 -3.14132 | gap 1, opp_overlap 2372013 2372014 ATCGTGCTGCTGGTC GGCGCCGCCG-CGG TGG CCGGTGGCGGCGCC TTCCTCGCGGCGACC TERM 653 2372406 - 2372386 - g 71 -10.3 -3.77196 | GGACCAGGCAGGAAA CCAGACCGG TGA CCGGGCCGG AGGCGCCGCGCAGGC SCO2207 2371976 - 2372671 + | hypothetical protein SCO2208 2373546 - 2372674 - | carboxylesterase SCO2209 2373658 - 2374182 + | transcriptional regulator SCO2210 2374319 - 2375350 + | glutamine synthetase SCO2211 2375406 - 2376335 + | hypothetical protein SCO2212 2376423 - 2376545 + | hypothetical protein SCO2213 2376676 - 2377257 + | regulatory protein TERM 654 2377266 - 2377292 + G 95 -23.8 -3.05384 | opp_overlap 2377238 GCGCTGAGCCCGTGC CGCCGCTCTGCC GAC GGCAGAGCGGCG TTCCCTCCGGCCGCC SCO2214 2377262 - 2378362 + | reductase SCO2215 2378415 - 2379692 + | two-component system sensor kinase SCO2216 2379677 - 2380330 + | two-component system response regulator SCO2217 2380490 - 2381995 + | secreted protein TERM 655 2382052 - 2382019 - T 95 -25.3 -2.70932 | GCCCGGTGGCAAGGA GGGGGCCGGTGGCGG ATGT CCGTCACCGGCCCCC TTCGCGCGTCCGCGT SCO2218 2382518 - 2382072 - | lipoprotein SCO2219 2382545 - 2383162 + | hypothetical protein SCO2220 2383230 - 2385161 + | hypothetical protein TERM 656 2385837 - 2385883 + G 70 -14.4 -3.19602 | gap 1, overlap 2385835 2385841 2385866 GCACGTGGACGGGGA CTACGCGCGGCGGGTGCGGAC CTGGGC GACCGCGTTCGCCGCGC-TGG TGTTCCTCTGGCAGC TERM 657 2385841 - 2385880 + G 79 -18.5 -2.79321 | overlap 2385837 2385835 2385866 GTGGACGGGGACTAC GCGCGGCGGGTGCGGAC CTGGGC GACCGCGTTCGCCGCGC TGGTGTTCCTCTGGC SCO2221 2385265 - 2386155 + | hypothetical protein SCO2222 2386152 - 2387246 + | iron-sulfur oxidoreductase (secreted protein) SCO2223 2387313 - 2388005 + | TetR family transcriptional regulator SCO2224 2388002 - 2388466 + | hypothetical protein SCO2225 2388844 - 2388485 - | isomerase SCO2226 2394296 - 2388900 - | bi-functional protein (secreted alpha-amylase/dextrinase) SCO2227 2394982 - 2394422 - | acetyltransferase SCO2228 2396807 - 2395074 - | alpha-glucosidase SCO2229 2397855 - 2396944 - | maltose permease SCO2230 2398873 - 2397869 - | maltose permease SCO2231 2400259 - 2398988 - | maltose-binding protein SCO2232 2400651 - 2401685 + | maltose operon transcriptional repressor SCO2233 2401780 - 2402643 + | integral membrane protein SCO2234 2405768 - 2402769 - | glutamate-ammonia-ligase adenylyltransferase SCO2235 2405942 - 2406205 + | hypothetical protein SCO2236 2406202 - 2406456 + | hypothetical protein SCO2237 2406519 - 2406965 + | lyase SCO2238 2408829 - 2406988 - | NAD(+) synthase (glutamine-hydrolysing) TERM 658 2408602 - 2408578 - G 74 -16.5 -3.14564 | GGAGGCCTCGACGAA GGAGGACCTGA GGG CCAGGTCCTCC ACCGGGTACCCGGTC SCO2239 2409466 - 2408840 - | secreted protein SCO2240 2410131 - 2409463 - | membrane protein TERM 659 2409720 - 2409745 + g 72 -11.8 -3.61089 | overlap 2409714 ACGTCACCCAGACGG CGCCGTGCTC CAGGGA GTGCACGGCG TTCTCGTTGTTCAGC SCO2241 2410423 - 2411784 + | glutamine synthetase SCO2242 2412264 - 2411818 - | membrane protein SCO2243 2412355 - 2412933 + | TetR family transcriptional regulator SCO2244 2415018 - 2412958 - | serine/threonine protein kinase TERM 660 2414218 - 2414272 + g 79 -19.1 -2.82623 | gap 1, overlap 2414251 GTCGAAGTCCCCGTT CGCGGCCCGGCCGCAGA-GCCGGACG ATCT CGGCGGGCGTCGGCCGCCGGGCCGGG TCCTTCTCCAGGCAG SCO2245 2415236 - 2415027 - | hypothetical protein SCO2246 2416084 - 2415308 - | hypothetical protein SCO2247 2416314 - 2416129 - | hypothetical protein SCO2248 2416596 - 2417093 + | hypothetical protein SCO2249 2417492 - 2417722 + | hypothetical protein TERM 661 2417779 - 2417746 - f 90 -21 -2.79133 | opp_overlap 2417768 2417774 CAACCCCGCACCACA CCCGGGCCCCGGAC CAGCGC GTCCGGGGCCCGGT TCGCGCGCCGGGCAA SCO2250 2417879 - 2418706 + | hypothetical protein SCO2251 2418753 - 2419427 + | integral membrane protein SCO2252 2419632 - 2419411 - | hypothetical protein SCO2253 2420483 - 2419629 - | hypothetical protein SCO2254 2421804 - 2420563 - | transmembrane efflux protein SCO2255 2422978 - 2421926 - | hypothetical protein panB 2423298 - 2424173 + | 3-methyl-2-oxobutanoate hydroxymethyltransferase TERM 662 2424220 - 2424262 + F 93 -20.7 -3.53012 | gap 1 GCCATCGCGGTACGG CCAC-CGGCCCCGCCGAT CTTCCCCC GTCGGCGGGGCCGCGTGG TTTCCCGGACGGGCC SCO2257 2424293 - 2425390 + | ABC transporter ATP-binding protein SCO2258 2425387 - 2426211 + | ABC transporter transmembrane protein SCO2259 2430237 - 2426233 - | multidomain-containing protein family TERM 663 2430213 - 2430241 + g 80 -7.9 -4.36914 | GCACGGGACCATTGT CCCCGCTGCCGTC GGA GCCGGTCACGGGG TTTTGTCCGCGCGGC SCO2260 2430388 - 2431185 + | membrane protein SCO2261 2431449 - 2431192 - | membrane protein SCO2262 2432165 - 2431446 - | oxidoreductase SCO2263 2432297 - 2432911 + | hypothetical protein TERM 664 2434602 - 2434552 - g 74 -16.8 -3.14564 | overlap 2434555 2434579 CGACGCGCGGACGAA CGAGCACGCGGTG-CGGCTGCGCG AGAAG CGCGCAGCCGACGCCGCGAGCG-G CTGATCAGTCGTCCC TERM 665 2434600 - 2434555 - g 89 -24 -2.77899 | gap 1, overlap 2434552 2434579 CGCGCGGACGAACGA GCACGCGGTG-CGGCTGCGCG AGAAG CGCGCAGCCGACGCCGCGAGC GGCTGATCAGTCGTC SCO2264 2433311 - 2434606 + | integral membrane protein SCO2265 2434885 - 2434607 - | hypothetical protein SCO2266 2434908 - 2435765 + | methionine aminopeptidase TERM 666 2435815 - 2435842 + F 95 -20.6 -3.60296 | ATCCACGTCGCGCGA CGGCCCGCTCTC CCCG GAGGGCGGGCCG TTTCGCGTCCGGGTG SCO2267 2435930 - 2436577 + | heme oxygenase SCO2268 2437237 - 2436593 - | hypothetical protein SCO2269 2438073 - 2437246 - | hypothetical protein SCO2270 2439746 - 2438127 - | membrane protein SCO2271 2441220 - 2439787 - | hypothetical protein SCO2272 2441324 - 2442376 + | binding-protein-dependent transport lipoprotein SCO2273 2442373 - 2443464 + | FecCD-family membrane transport protein SCO2274 2443461 - 2444303 + | hemin importer ATP-binding subunit TERM 667 2444409 - 2444443 + F 70 -4.2 -4.41047 | opp_overlap 2444410, overlap 2444410 GGCCCGTGCTCATAC ACCGTCCATGAGAT TCGGATC ACCGCATGGACGGG TTTTGCTTAGGAAAT SCO2275 2444536 - 2445690 + | lipoprotein SCO2276 2445705 - 2446967 + | membrane protein SCO2277 2446970 - 2447842 + | hypothetical protein SCO2278 2447904 - 2448791 + | hypothetical protein SCO2279 2449538 - 2448807 - | hypothetical protein SCO2280 2450291 - 2449644 - | TetR family transcriptional regulator SCO2281 2451040 - 2450354 - | two-component system response-regulator SCO2282 2452028 - 2451048 - | hypothetical protein SCO2283 2453629 - 2452574 - | secreted esterase SCO2284 2454993 - 2453707 - | membrane transport protein SCO2285 2455103 - 2456158 + | oxidoreductase SCO2286 2457821 - 2456145 - | alkaline phosphatase TERM 668 2456897 - 2456937 + g 70 -13.1 -3.35934 | opp_overlap 2456919, overlap 2456919 2456922 AGTAGGCCCGGTAGG CGGCGGCCCGGCGGATGAG GAA CTCCTCGGGCGGGACGCTG TTCTCCGGTGTCTCG SCO2287 2457954 - 2458745 + | oxidoreductase TERM 669 2458938 - 2458995 + T 100 -30.7 -3.55444 | gap 1, overlap 2458939 TGCCATACCGAGGGG GGAGGCGGCAGCGTTCCGCCACACCGGT CGC ACCGGTG-GGCGGAACGCTGCCGCACCG TTTCCCGGCTACGCC TERM 670 2458939 - 2458994 + T 100 -34.2 -2.73124 | gap 1, overlap 2458938 GCCATACCGAGGGGG GAGGCGGCAGCGTTCCGCCACACCGGT CGC ACCGGTG-GGCGGAACGCTGCCGCACC GTTTCCCGGCTACGC SCO2288 2459330 - 2459004 - | hypothetical protein SCO2289 2459484 - 2460026 + | membrane protein SCO2290 2460057 - 2460398 + | hypothetical protein TERM 671 2460444 - 2460408 - T 100 -26.7 -3.08133 | GAGTGAGTGACCGAA GGTCCGTACCCGTGGGC CTC GTCCACGGGTACGGACC CGAGGGGTCCGGGCT SCO2291 2461470 - 2460463 - | secreted acetylxylan esterase SCO2292 2462512 - 2461505 - | secreted endo-1,4-beta-xylanase B (xylanase B) SCO2293 2464202 - 2463222 - | integral membrane protein SCO2294 2465058 - 2464222 - | AraC family transcription regulator SCO2295 2465169 - 2465930 + | hypothetical protein SCO2296 2465927 - 2466541 + | integral membrane protein SCO2297 2466581 - 2467363 + | hypothetical protein SCO2298 2467437 - 2468096 + | KHG/KDPG aldolase SCO2299 2469564 - 2468071 - | bifunctional RNase H/acid phosphatase TERM 672 2469261 - 2469293 + g 77 -18.5 -2.78384 | overlap 2469214 CCGCCAGCGGCTTCA TGTCGGGGTGCTTGA TCT TCCAGCGCCCCGACA TCTGCTCGACGACGA SCO2300 2470166 - 2469576 - | hypothetical protein SCO2301 2471173 - 2470316 - | hypothetical protein TERM 673 2470816 - 2470868 + g 70 -13.9 -3.25823 | overlap 2470817 GCCGTACGACGTTCA GGTCGAGGGCGCCGGCCAGCGCGTC GGA GACGCCCGGGTCGGCGGTGTCGGCG TTGGTGTGGGCGACG TERM 674 2470817 - 2470867 + g 73 -17.4 -2.55351 | overlap 2470816 CCGTACGACGTTCAG GTCGAGGGCGCCGGCCAGCGCGTC GGA GACGCCCGGGTCGGCGGTGTCGGC GTTGGTGTGGGCGAC SCO2302 2471382 - 2472650 + | hypothetical protein SCO2303 2472748 - 2472915 + | hypothetical protein TERM 675 2473009 - 2472962 - T 75 -12.4 -3.60473 | opp_overlap 2472962 2472969, overlap 2472958 2472963 CACACACGAAAGCAA GCGGCTCCGGCCCCGTTCGTCG TATC CGGCGGACGGGGCCGTTGTCGT CATCCGGTTGCCGTC TERM 676 2473008 - 2472963 - T 72 -15.9 -2.75561 | opp_overlap 2472962 2472969, overlap 2472962 2472958 ACACACGAAAGCAAG CGGCTCCGGCCCCGTTCGTCG TATC CGGCGGACGGGGCCGTTGTCG TCATCCGGTTGCCGT TERM 677 2472969 - 2473002 + T 100 -23.9 -3.44229 | opp_overlap 2472963 2472962 2472958, overlap 2472962 GAAAGCAAGCGGCTC CGGCCCCGTTCGTCG TATC CGGCGGACGGGGCCG TTGTCGTCATCCGGT SCO2304 2474024 - 2473023 - | dehydrogenase SCO2305 2474063 - 2474989 + | ABC transporter ATP-binding subunit SCO2306 2474986 - 2475702 + | ABC transporter integral membrane protein SCO2307 2475740 - 2476969 + | two-component sensor kinase TERM 678 2477676 - 2477629 - g 76 -15.4 -3.38046 | gap 1, overlap 2477627 CGGCGATCGGAAAGA CCGGCACGCGCAACCGTGCGGAG GCG CTCCGCGCGGC-GCGGGGGCAGG GGTGGCTCTAGGTCC SCO2308 2477055 - 2477687 + | two-component system response regulator SCO2309 2479641 - 2478172 - | transmembrane transport protein SCO2310 2479917 - 2481674 + | integral membrane efflux protein SCO2311 2481918 - 2483546 + | hypothetical protein SCO2312 2483562 - 2484278 + | secreted protein SCO2313 2484289 - 2485299 + | hypothetical protein SCO2314 2485458 - 2486327 + | integral membrane protein TERM 679 2486350 - 2486395 + F 85 -16.9 -3.5394 | overlap 2486351 2486354 GCTCACCCGTTCACC TCAACGGCCCCTCGCCC ACCGGTACTTCC GGGCGAGGGGCCGTAGG TTTCGAACGCGCTTT TERM 680 2486351 - 2486394 + F 79 -18.2 -2.72043 | overlap 2486350 2486354 CTCACCCGTTCACCT CAACGGCCCCTCGCCC ACCGGTACTTCC GGGCGAGGGGCCGTAG GTTTCGAACGCGCTT TERM 681 2486354 - 2486391 + F 78 -18.5 -2.64155 | overlap 2486351 2486350 ACCCGTTCACCTCAA CGGCCCCTCGCCC ACCGGTACTTCC GGGCGAGGGGCCG TAGGTTTCGAACGCG SCO2315 2486429 - 2486722 + | hypothetical protein SCO2316 2487833 - 2486736 - | hypothetical protein SCO2317 2488564 - 2487830 - | methyltransferase TERM 682 2487906 - 2487935 + g 71 -10.8 -3.76482 | gap 2, overlap 2487908 ATCAGCGGGTTCAGC GCCTGCTCGGCGAC CCGC GTCGCC-AGC-GGC TTCTTCATGATGTCC SCO2318 2490054 - 2488558 - | glycosyl transferase SCO2319 2490169 - 2490921 + | TetR family transcriptional regulator SCO2320 2491818 - 2490934 - | hypothetical protein SCO2321 2491926 - 2493185 + | secreted protein SCO2322 2493182 - 2493844 + | secreted protein SCO2323 2493924 - 2495063 + | integral membrane protein SCO2324 2495060 - 2496751 + | ABC transporter ATP-binding subunit SCO2325 2496748 - 2497599 + | integral membrane protein SCO2326 2497804 - 2498268 + | hypothetical protein SCO2327 2498675 - 2498289 - | hypothetical protein SCO2328 2498914 - 2499570 + | dipeptidase SCO2329 2500535 - 2499573 - | transcriptional regulator SCO2330 2500697 - 2501287 + | isochorismatase SCO2331 2501697 - 2501284 - | MarR family transcriptional regulator SCO2332 2501757 - 2502536 + | hydrolase SCO2333 2502545 - 2502709 + | hypothetical protein TERM 683 2502920 - 2502954 + G 76 -12.1 -3.85698 | overlap 2502921 CGCTGCTCGCCACGT TGCCCACCATCCCGC TGTAC GTGGTGTGGTGGGCG TTTCTCGCCACCGGC TERM 684 2503562 - 2503603 + G 81 -16.5 -3.55444 | gap 1, overlap 2503563 TCGCCGTCACCGTGC TGGCCCCGCGT-ACCTGGCG GGT CGCCCGGTGGAGCGGGGCCG TTTACGCGCTCGGGA TERM 685 2503563 - 2503602 + G 74 -17.8 -2.73124 | gap 1, overlap 2503562 CGCCGTCACCGTGCT GGCCCCGCGT-ACCTGGCG GGT CGCCCGGTGGAGCGGGGCC GTTTACGCGCTCGGG SCO2334 2502808 - 2504463 + | integral membrane protein SCO2335 2506702 - 2504417 - | integral membrane protein TERM 686 2505721 - 2505762 + g 74 -17.4 -2.78463 | gap 2 CGTGCAGCGACTGGT TGGCGAGGTCGTCGGCCTCG CCGC CCAGGCCGACG-CC-CGCCA TGTGGTGCACCCAGT SCO2336 2506906 - 2508294 + | integral membrane transport protein SCO2337 2508324 - 2508884 + | acetyltransferase SCO2338 2508881 - 2509552 + | O-methyltransferase SCO2339 2510091 - 2509609 - | hypothetical protein SCO2340 2510090 - 2510497 + | hypothetical protein SCO2341 2511071 - 2510508 - | hypothetical protein SCO2342 2511747 - 2511076 - | secreted protein TERM 687 2511849 - 2511831 - H 81 -16 -3.53224 | CAGTCCGCGCTCAAA CGGCGCAC GGC GTGCGCCG ACGGCACACCGGTGG SCO2343 2511913 - 2512446 + | acetyltransferase SCO2344 2514552 - 2512483 - | integral membrane transport protein SCO2345 2514601 - 2515959 + | peptidodoglycan-binding membrane protein SCO2346 2516663 - 2515998 - | hydrolase TERM 688 2516740 - 2516692 - R 73 -11 -3.73775 | opp_overlap 2516692 2516696, overlap 2516695 GGGACGGGGAGGAAA CAAGGCGGC-CCCGCCCGCCGGTC AGG GAG-AACGGGCGGGAGCCACTTTG TTCATCCACGGTACA SCO2347 2517393 - 2516812 - | integral membrane protein TERM 689 2517740 - 2517682 - H 87 -18.1 -3.55761 | overlap 2517650 CACCGAGGGCCGAAA GTCCCG-CGCCGAGACCCGCCGGATCCCG CGA CGAGGCCCGCCGGGTCCC-GCGACGGCAC TCGTCAAAGTCCTGT SCO2348 2517893 - 2518537 + | secreted protein SCO2349 2518626 - 2520308 + | hypothetical protein SCO2350 2520564 - 2521025 + | integral membrane protein SCO2351 2521200 - 2521838 + | integral membrane protein SCO2352 2522161 - 2521928 - | hypothetical protein SCO2353 2522807 - 2522166 - | hypothetical protein SCO2354 2522814 - 2523149 + | hypothetical protein TERM 690 2523150 - 2523174 + F 81 -18.6 -3.05384 | GGCCCGCACGCGTAA GGCCCCCGGA AGATC TCCGGGGGCC TTGGCTCCGACGACG SCO2355 2523500 - 2524270 + | lipoprotein SCO2356 2524342 - 2525745 + | hypothetical protein TERM 691 2525952 - 2525992 + G 71 -15.3 -3.14132 | GTCGGCGGCTCGGCC TCCGCACCGGCGCCGTCGT CGG GCGGCGGTGGCGGTGGGGG TTGCTGCGGCGGCGG SCO2357 2525802 - 2526020 + | hypothetical protein SCO2358 2526702 - 2526064 - | two-component system response regulator SCO2359 2527817 - 2526699 - | two-component system sensor kinase SCO2361 2529534 - 2528722 - | hypothetical protein SCO2360 2527923 - 2528804 + | hypothetical protein SCO2362 2532053 - 2529534 - | hypothetical protein SCO2363 2533298 - 2532132 - | ATP/GTP-binding protein SCO2364 2533506 - 2534501 + | hypothetical protein SCO2365 2535269 - 2534532 - | hypothetical protein TERM 692 2535292 - 2535345 + r 80 -16.9 -3.21099 | gap 4 CCACCTTCGCGTCAC CGC-C-GA-CGGGGCGGCC-CCGAGGA GTCG TCCTCGTCGGCCGCCCCGCTCAGAGCG TTCCTCGTCCGGGCC SCO2366 2536563 - 2535421 - | integral membrane protein SCO2367 2537188 - 2536613 - | hypothetical protein SCO2368 2537915 - 2537340 - | hypothetical protein SCO2369 2538555 - 2538097 - | thiol-specific antioxidant protein SCO2370 2539196 - 2538717 - | hypothetical protein TERM 693 2539522 - 2539506 - H 73 -10.8 -3.86822 | overlap 2539517 GAATCGGCGCAGAAA CCCGGG AGGAA CCCGGG GAGAAACCGGGGAGA aceE 2539576 - 2542332 + | pyruvate dehydrogenase subunit E1 SCO2372 2542768 - 2542460 - | small hydrophobic protein SCO2373 2544617 - 2543007 - | tetracenomycin C efflux protein SCO2374 2544733 - 2545416 + | transcriptional regulator SCO2375 2545471 - 2546691 + | secreted protein SCO2376 2546758 - 2547645 + | hypothetical protein TERM 694 2547736 - 2547766 + T 85 -16.9 -3.54951 | gap 1, opp_overlap 2547731, overlap 2547748 TATCGATACAGCCCC GCGCCCCTGAGGGG CGCG CCCCTT-GGGGCGC TTCTCTACTCCCGTC SCO2377 2548787 - 2547771 - | aldo/keto reductase SCO2378 2549374 - 2548784 - | merR family transciptional regulator SCO2379 2549404 - 2549871 + | acetyltransferase SCO2380 2549891 - 2550712 + | hypothetical protein SCO2381 2550901 - 2551737 + | hypothetical protein SCO2382 2551706 - 2551903 + | hypothetical protein SCO2383 2552256 - 2556893 + | secreted protein TERM 695 2557152 - 2557105 - g 71 -4.8 -4.26188 | gap 3, opp_overlap 2557107, overlap 2557106 CGTACAGAGGCAAAA CTGCG-AGACGCCGCCCTCACGC TCTTC GCGCG-GGGCATCGACTACGC-G AACCCGCCCGCGGTC SCO2384 2556886 - 2557305 + | hypothetical protein SCO2385 2557982 - 2557326 - | hypothetical protein SCO2386 2558045 - 2559250 + | hypothetical protein SCO2387 2559340 - 2560290 + | ACP S-malonyltransferase SCO2388 2560307 - 2561338 + | 3-oxoacyl-(acyl carrier protein) synthase III acpP 2561443 - 2561691 + | acyl carrier protein TERM 696 2562411 - 2562369 - g 73 -17.6 -2.64735 | ACGCCATCGAGATGA TCCGCACCGGCCGCGCCGAC GTC GTCGTCGCGGGTGGCACGGA GGCGGCGATCCACCC SCO2390 2561801 - 2563090 + | 3-oxoacyl-(ACP) synthase II SCO2391 2563686 - 2563192 - | hypothetical protein SCO2392 2563944 - 2564861 + | lipoprotein SCO2393 2564900 - 2565871 + | aldose 1-epimerase SCO2394 2566207 - 2567460 + | secreted protein SCO2395 2568256 - 2567432 - | integral membrane protein SCO2396 2568771 - 2568352 - | hypothetical protein SCO2397 2569982 - 2568888 - | oxidoreductase SCO2398 2570030 - 2570485 + | MarR family transcriptonal regulator TERM 697 2570689 - 2570663 - g 71 -10 -3.9534 | ACGGACATCGAGAAA CTGCGGAGCCGC GGG GCGGCCGAGCAG GACGCCGAGGCCGGT SCO2399 2570546 - 2571427 + | hypothetical protein SCO2400 2572189 - 2571440 - | hypothetical protein TERM 698 2571807 - 2571823 + g 71 -9.3 -3.86015 | CCGTCCGTCGTCTCG CCGCCCG CCG CGGCCGG TTTCTCCGGGGAGTG TERM 699 2572032 - 2572070 + g 82 -4.2 -4.85599 | overlap 2572036 2572045 GCTTCCTCGGGGGTC TCGGCGTCCGCCGCCGCG TCG CGCGCAGGCCGGGGCGGG TTTTTCTCACCTGCC SCO2401 2572404 - 2573570 + | dehydratase SCO2402 2573567 - 2574583 + | dehydrogenase SCO2403 2574719 - 2575690 + | hypothetical protein SCO2404 2575786 - 2576895 + | sugar-binding receptor SCO2405 2576928 - 2578505 + | sugar-transport ATP binding protein TERM 700 2578876 - 2578918 + G 71 -10.5 -3.73088 | gap 1, overlap 2578877 GCCGGTGGCGGTGAT CCTCTGCCTGGCCATCGGCG CCGC CGCCGGTG-CCGTGCAGGGC TTCTTCATCGCCTAT SCO2406 2578502 - 2579746 + | sugar transport permease TERM 701 2579753 - 2579782 + F 93 -17.8 -3.78934 | opp_overlap 2579751, overlap 2579754 GGTTCGTAACGGATC TCGGGCCCCGCC ACTCAC GGCGGGGCCCGC TTCTTCTCACGGAAG TERM 702 2579754 - 2579781 + F 90 -21.3 -2.87146 | opp_overlap 2579751, overlap 2579753 GTTCGTAACGGATCT CGGGCCCCGCC ACTCAC GGCGGGGCCCG CTTCTTCTCACGGAA SCO2407 2579862 - 2580962 + | aldose 1-epimerase TERM 703 2581064 - 2581032 - f 73 -16.2 -2.87564 | opp_overlap 2581053 CCACCTCCGTATACA GGGGCGGCCCGTGT CCCCC ACGCGGGCCGCCCA CTTACGGAGGTCCAC SCO2408 2581080 - 2582705 + | aminotransferase SCO2409 2583998 - 2582733 - | secreted protein SCO2410 2584839 - 2584078 - | integral membrane protein SCO2411 2585440 - 2584886 - | hypothetical protein SCO2412 2586126 - 2585467 - | hypothetical protein SCO2413 2586635 - 2586123 - | secreted protein SCO2414 2587933 - 2586632 - | secreted protein SCO2415 2589171 - 2587930 - | secreted protein SCO2416 2590181 - 2589168 - | secreted protein TERM 704 2589652 - 2589697 + g 90 -21.1 -3.29511 | overlap 2589645 CCGAACTGCTCGACG CCGTCGCCGATGGCCTCGCCG TTGC CGTCGAGGTTGTCGGCGCCGG TTCTCAGCAGCTCGG SCO2417 2591233 - 2590178 - | secreted protein SCO2418 2592294 - 2591230 - | secreted protein SCO2419 2593547 - 2592291 - | secreted protein SCO2420 2594355 - 2593549 - | ABC-transporter integral membrane protein SCO2421 2595126 - 2594362 - | ABC-transporter integral membrane protein SCO2422 2596154 - 2595123 - | ABC-transporter ATP-binding protein TERM 705 2596011 - 2596001 - G 75 -6.8 -4.26903 | GCGACTTCAGGAAAA CGGT CTT ACCG GTTCCGGACGGGCCC SCO2423 2596787 - 2597419 + | secreted protein SCO2424 2597556 - 2599157 + | secreted protein SCO2425 2599192 - 2600133 + | secreted protein SCO2426 2600318 - 2601529 + | regulatory protein SCO2427 2602537 - 2601569 - | secreted arabinase TERM 706 2603161 - 2603112 - g 72 -14.1 -3.35679 | GCTGCGCATCGAGAA CGCCGGCTGGAGCCCGGTCGTCG CCGC CGACTACGTCGCTCCCGCCAGCG ACCCCGTGGGCATAC SCO2428 2602879 - 2604447 + | phosphate binding protein (secreted protein) SCO2429 2605133 - 2604477 - | secreted protein SCO2430 2605550 - 2608351 + | secreted beta-galactosidase SCO2431 2609869 - 2608364 - | alpha-L-arabinofuranosidase SCO2432 2610760 - 2609897 - | sugar transporter membrane protein SCO2433 2611698 - 2610757 - | sugar transporter membrane protein SCO2434 2613053 - 2611695 - | sugar transporter sugar binding protein SCO2435 2613322 - 2613849 + | hypothetical protein SCO2436 2613846 - 2615030 + | integral membrane protein SCO2437 2615125 - 2616336 + | integral membrane protein SCO2438 2616326 - 2617732 + | secreted protein SCO2439 2618650 - 2617790 - | calcium-binding protein TERM 707 2618558 - 2618608 + g 88 -21.1 -3.14132 | gap 1, opp_overlap 2618560 GATGTCGAGCCACAG GAGGCGGCCCGTGGC-CGGGTCCC AGGT GGGGCCCTCGCCGAGGGTCGCCTC TTCGTGGACGGCCAC TERM 708 2618630 - 2618643 + g 71 -4.5 -4.25283 | gap 1, overlap 2618610 2618630 GACGGCCACCTCGAA GG-CCG TGC CGGTCC TTTTCATGCCGCGCT SCO2440 2619420 - 2618647 - | transcriptional regulator SCO2441 2619547 - 2620149 + | hypothetical protein SCO2442 2620881 - 2620174 - | GntR family transcriptional regulator TERM 709 2620828 - 2620851 + g 71 -11 -3.78775 | overlap 2620809 CTGGCGCAGCCGCTC CAGCACCTGT TCGT ACAGGCGCTG TTTGGTCATGGGGCG TERM 710 2622369 - 2622395 + G 83 -15 -3.61715 | GCGCTGGTGCTGGCC GCGGCCCCGGAC GTG GACCGGGACCGC TTCTTCCGGCAGCTG SCO2443 2621091 - 2622488 + | carrier protein membrane protein SCO2444 2622576 - 2624033 + | acyl-CoA synthetase TERM 711 2624373 - 2624331 - g 73 -17 -3.02144 | gap 1, opp_overlap 2624323 GTACGCCCGTGAACA CCGGCTGCCGGTGGT-GCC GTTGGT GGCGACCGGCGGCAGCCGG ATGCAGGAGGGGATG SCO2445 2624026 - 2625402 + | acetyl CoA carboxylase (alpha and beta subunits) TERM 712 2625647 - 2625605 - T 100 -32.8 -3.86346 | TGACGGTCCGAGAAA CCGACGGCGCCGCCTCCCCG TCC CAGGGAGGCGGCGCCGTCCG CGTGTCCGCGCCCGG SCO2446 2629333 - 2625671 - | secreted peptidase SCO2447 2629512 - 2629973 + | hypothetical protein SCO2448 2629970 - 2631634 + | hypothetical protein SCO2449 2631773 - 2632795 + | hypothetical protein SCO2450 2632795 - 2636844 + | serine/threonine protein kinase (regulator) TERM 713 2636981 - 2636963 - f 79 -17.4 -3.03441 | GATCAGTGCCTAAGA GGCCGCCC ACC GGGCGGCC CCGCACGGTCCGCGC SCO2451 2637014 - 2638096 + | rod shape-determining protein SCO2452 2638132 - 2639559 + | two-component sensor histidine kinase SCO2453 2639574 - 2639792 + | hypothetical protein SCO2454 2640001 - 2642232 + | integral membrane protein TERM 714 2642260 - 2642299 + T 84 -19.3 -2.87132 | GCCCGCCCCCCGGAC ACCGTGCCCGTCTCCGT ACCCCC ACGGAGGCGGGCGCGGC TGTGTCGCCGGACGC SCO2455 2643939 - 2642344 - | spermidine synthase SCO2456 2644459 - 2644019 - | integral membrane protein SCO2457 2644906 - 2644511 - | lipoprotein SCO2458 2645421 - 2644903 - | hypothetical protein SCO2459 2645538 - 2646071 + | hypothetical protein SCO2460 2646650 - 2646222 - | hypothetical protein TERM 715 2647119 - 2647104 - H 93 -10.4 -4.8048 | opp_overlap 2647104 GCGGCACATGAAAAA GGACCC CGGA GGGTCC TCGTTCACGGTGCTC SCO2461 2647411 - 2647737 + | secreted protein SCO2462 2647782 - 2649230 + | sugar kinase (fragment) SCO2463 2649370 - 2651103 + | ABC transporter SCO2464 2651103 - 2653031 + | ABC transporter SCO2465 2654327 - 2653137 - | RNA polymerase principal sigma factor TERM 716 2654368 - 2654395 + H 77 -4.1 -4.65895 | gap 1, opp_overlap 2654367 2654369, overlap 2654367 2654369 TGTGGGGTACGACAC ATCGCCGCCACG AGGGG CGTG-CGGTGAC TTTTTGCGTCCGGGG TERM 717 2654460 - 2654438 - H 77 -11.3 -4.08767 | gap 1 GTTACCCCCGGAAAA CCGGGATGCC GAGC GGCA-CCCGG CTCTGACACGATCCC SCO2466 2654512 - 2655117 + | hypothetical protein SCO2467 2655114 - 2656115 + | hypothetical protein dnaG 2658056 - 2656131 - | DNA primase SCO2469 2659351 - 2658086 - | reductase SCO2470 2660754 - 2659480 - | deoxyguanosinetriphosphate triphosphohydrolase-like protein SCO2471 2661637 - 2660813 - | secreted protein TERM 718 2661681 - 2661706 + H 74 -7.5 -4.21275 | overlap 2661670 2661701 CGGCCGGAGATTGCC TCCCCGTTGCG TGGG TGTCACGGGGA TTTTCCGTCGGTTCA SCO2472 2661818 - 2662504 + | integral membrane protein SCO2473 2662608 - 2665067 + | nitrate reductase SCO2474 2665196 - 2666839 + | metalloproteinase (secreted protein) SCO2476 2668561 - 2667818 - | dehydrogenase/reductase (secreted protein) SCO2475 2666940 - 2667869 + | LysR family transcriptional regulator SCO2477 2669391 - 2668624 - | short chain dehydrogenase TERM 719 2669238 - 2669219 - G 71 -10.6 -3.72576 | TCCGCCTGCACGAAA CCCGCGCC CTCC GGCGCCGG GCCCGTCGCCGACCT TERM 720 2669508 - 2669467 - R 78 -12.3 -4.01603 | gap 1, opp_overlap 2669475 2669505, overlap 2669468 2669488 GAGGCAAAGACGAAA TTGCAGCGGCTGCCATAGGA AGC TCCTATGGCAGCCGG-GCGG CGTTGACGCGGCGCC TERM 721 2669507 - 2669468 - R 75 -15.8 -3.00239 | gap 1, opp_overlap 2669475 2669505, overlap 2669467 2669488 AGGCAAAGACGAAAT TGCAGCGGCTGCCATAGGA AGC TCCTATGGCAGCCGG-GCG GCGTTGACGCGGCGC SCO2478 2670111 - 2669524 - | reductase SCO2479 2670321 - 2670863 + | hypothetical protein SCO2481 2671941 - 2671552 - | hypothetical protein SCO2480 2670982 - 2671614 + | secreted protein SCO2482 2672049 - 2672984 + | dehydrogenase (secreted protein) SCO2483 2673003 - 2673713 + | secreted protein SCO2484 2673743 - 2675029 + | secreted protein SCO2485 2675869 - 2675087 - | hypothetical protein TERM 722 2675612 - 2675585 - G 75 -12.6 -3.61398 | TCCGGCGGCGAAGAA GGCGCCGCCCGA GGAC CCGGCCAGCGCC GCCAGGCCGATGCGT SCO2486 2676046 - 2677278 + | nitrite reductase NirB TERM 723 2677311 - 2677343 + G 71 -15.6 -3.14344 | AACCCCCCGACGATC GTGCTGGTCGGCCA CGGCA TGGTCGGCCAGCGC TTCCTGGAGGCCCTC SCO2487 2677278 - 2679893 + | nitrite reductase large subunit NirB SCO2488 2679896 - 2680291 + | nitrite reductase small subunit NirC SCO2489 2680340 - 2680924 + | TetR family transcriptional regulator SCO2490 2681005 - 2681772 + | dehydrogenase (secreted protein) SCO2491 2682749 - 2681817 - | oxidoreductase TERM 724 2683172 - 2683142 - g 81 -17.5 -3.28712 | opp_overlap 2683122, overlap 2683122 2683121 CGTCGGCTGCGACAA GCCGCCGGCCGGC TTCGT GCCCGCCGACGGC AAGGACAGCGGCGCC SCO2492 2682933 - 2683406 + | hypothetical protein SCO2493 2684677 - 2683469 - | hypothetical protein TERM 725 2684331 - 2684306 - G 71 -10.4 -3.7732 | gap 1, overlap 2684307 GCGGGAGATGAAGAA GTCGCGCGGGG TGCGG CCCCACGCG-C TCATGCAGATGACGA TERM 726 2684816 - 2684791 - R 95 -17.6 -4.37886 | opp_overlap 2684791 GCACGTGTCACAAAA GGCGGCACCC CCGCAC GGGTGCCGCC TTTTCTCGTGGTCCG TERM 727 2684791 - 2684816 + r 100 -17.6 -4.4891 | opp_overlap 2684791 GCACGTGTCACAAAA GGCGGCACCC CCGCAC GGGTGCCGCC TTTTCTCGTGGTCCG SCO2494 2687633 - 2684904 - | pyruvate phosphate dikinase TERM 728 2688041 - 2688093 + H 77 -14.7 -3.53012 | gap 1, opp_overlap 2688048, overlap 2688043 CGCCGGCGCCGGACG TACGAGAGTGCGGCGGGTCCCGGC CCCCTC GCCGGGGCCCGCCGTCCAC-CGGG TTTCGCACGGAAGGA TERM 729 2688043 - 2688092 + H 72 -16.2 -2.71712 | opp_overlap 2688048, overlap 2688041 CCGGCGCCGGACGTA CGAGAGTGCGGCGGGTCCCGGC CCCCTC GCCGGGGCCCGCCGTCCACCGG GTTTCGCACGGAAGG TERM 730 2688087 - 2688048 - H 79 -17.7 -2.80816 | opp_overlap 2688043 2688041 GCCGGACGTACGAGA GTGCGGCGGGTCCCGGC CCCCTC GCCGGGGCCCGCCGTCC ACCGGGTTTCGCACG SCO2495 2688116 - 2689894 + | hypothetical protein TERM 731 2690072 - 2690024 - g 71 -10.7 -3.77588 | ACCGCACATGAAGAA GCGCACCGCCTGCGTCGCCGCCC TCA GTGCGGCCACTCTGGCCGTACTC CCCCTGGCCGCCACC SCO2496 2690016 - 2690456 + | secreted protein SCO2497 2691696 - 2690476 - | hypothetical protein SCO2498 2691805 - 2693250 + | efflux protein SCO2499 2697708 - 2693290 - | transport ATPase SCO2500 2697734 - 2698408 + | hypothetical protein SCO2501 2699575 - 2698679 - | DNA-binding protein SCO2502 2699686 - 2701119 + | transport protein SCO2503 2701242 - 2702318 + | chitinase precursor TERM 732 2702404 - 2702364 - T 100 -24.7 -3.63968 | overlap 2702365 CCCGAAACGCCGAAA CGCCCACCCCCCTCCCGAC CGA GTCGGGTGGTGGGTGGGCA CAGGCCCCGGGGGCC TERM 733 2702403 - 2702365 - T 95 -26 -2.7806 | overlap 2702364 CCGAAACGCCGAAAC GCCCACCCCCCTCCCGAC CGA GTCGGGTGGTGGGTGGGC ACAGGCCCCGGGGGC SCO2504 2703843 - 2702461 - | glycyl-tRNA synthetase SCO2505 2704004 - 2704990 + | ABC-transporter metal-binding lipoprotein TERM 734 2705021 - 2704991 - f 100 -21.8 -3.33696 | opp_overlap 2704996 CTCGGCGCCAAGTAA GCAGCCCGGCCGGG CAG CCCGACCGGGCGGC CCGGCCCGTTCGATC TERM 735 2704996 - 2705029 + F 93 -20.9 -3.13164 | opp_overlap 2704991 CGCCAAGTAAGCAGC CCGGCCGGGCAGCCC GACC GGGCGGCCCGGCCCG TTCGATCGTTACGGA SCO2506 2705052 - 2705822 + | metal transport ABC transporter SCO2507 2705836 - 2706738 + | metal transport ABC transporter SCO2508 2706801 - 2707220 + | metal uptake regulation protein TERM 736 2707227 - 2707252 + T 80 -18.3 -2.88544 | gap 1 GGCGGTTGAGCCGGT GGGG-CCGGGGC TGT GCCCCGGGCCCC TGTATCGGCCTGAAC SCO2509 2708164 - 2707331 - | undecaprenyl phosphate synthetase recO 2708932 - 2708177 - | DNA repair protein RecO SCO2511 2709167 - 2708946 - | hypothetical protein SCO2512 2709370 - 2709164 - | hypothetical protein TERM 737 2709573 - 2709587 + G 73 -5.6 -4.35116 | opp_overlap 2709564 2709569, overlap 2709574 GAATCACCCAAGTGG ACCTGG GAT CCAGGG TTTTCGTCTCCGGTG SCO2513 2709485 - 2710318 + | hypothetical protein SCO2514 2710300 - 2710590 + | hypothetical protein SCO2515 2710619 - 2711158 + | lipoprotein TERM 738 2711404 - 2711368 - g 70 -13 -3.40403 | gap 1 CGGGTGGGAGCACAA CCGATGCCCTCACCTGG TCCG CCT-GCGAGGGCACCGG GCTCGACCCCCGGCA TERM 739 2712582 - 2712557 - g 70 -14.7 -3.28712 | overlap 2712574 GCTGCTCGTGCAGAA CGAGCGGGACG TCAA CACCCCGCTCG CCGGCGCGCTGCGGA SCO2516 2711253 - 2712752 + | secreted protein SCO2517 2713423 - 2712740 - | two-component system response regulator SCO2518 2714775 - 2713432 - | two-component sensor kinase TERM 740 2713856 - 2713880 + g 70 -17.1 -2.78816 | AGGCCGGGCAGCGGA CCGCGGGCGTC GGG GACGCCGGCGG TGTCCTGCCCCCTGA TERM 741 2714758 - 2714731 - G 87 -19.9 -3.14683 | ATACTCCGCGACGAA CGCGCCCCTCC GGGAGG GGAGGGGCGCG CTCCGGACGCCGGGC SCO2519 2716855 - 2714777 - | integral membrane protein TERM 742 2716812 - 2716837 + g 73 -16.1 -2.96274 | overlap 2716806 CCGAGCACCAGCCAG GGCACGGCCCG CCGC CGCGCCGTGCC TGTCGTTGTGGCCCC SCO2520 2718136 - 2717003 - | hypothetical protein SCO2521 2719215 - 2718235 - | hypothetical protein SCO2522 2720170 - 2719217 - | hypothetical protein TERM 743 2719990 - 2720035 + g 84 -21.1 -2.71144 | gap 1 GGGGCCGTTTGCCGC CGGCCC-GGGCGGTGGCGGC GGTGCGG GCCGCCTCCACCCAGGGCCG TACTTCGGCGAAGTG SCO2523 2721096 - 2720179 - | hypothetical protein SCO2524 2722943 - 2721099 - | hypothetical protein SCO2525 2723800 - 2723027 - | hypothetical protein SCO2526 2724049 - 2724603 + | acetyltransferase SCO2527 2725295 - 2724600 - | hypothetical protein TERM 744 2725461 - 2725423 - R 95 -26 -2.62263 | opp_overlap 2725418 ATGGCCGGTATATGA CGGGGTCCCGCCCACCGG TTT CCGGCGGGCGGGACCTCA AACCGCTGATTCGGC SCO2528 2727201 - 2725480 - | 2-isopropylmalate synthase TERM 745 2727460 - 2727445 - H 78 -2.4 -4.89393 | opp_overlap 2727458, overlap 2727447 GAAAGGGGACAAAAA GTGCGG TATA CCACTC CCGGCCGGATCGCGG SCO2529 2727564 - 2728634 + | metalloprotease SCO2530 2728656 - 2728922 + | hypothetical protein SCO2531 2728980 - 2730326 + | beta-glucosidase SCO2532 2730432 - 2731511 + | PhoH-like protein SCO2533 2731524 - 2732021 + | putative metalloprotease SCO2534 2732018 - 2733322 + | hypothetical protein SCO2535 2733319 - 2733693 + | hypothetical protein SCO2536 2735154 - 2733655 - | transmembrane transport protein SCO2537 2735261 - 2736145 + | DNA-binding protein SCO2538 2736142 - 2736540 + | hypothetical protein TERM 746 2736864 - 2736839 - g 70 -13.9 -3.28712 | CCCGGGCCTGCACAA GCCGCGCACCC TGCT GGGCGAGCGGC TGAACGACGTGGTGC era 2736597 - 2737559 + | GTP-binding protein Era SCO2540 2738772 - 2737582 - | carbohydrate kinase SCO2541 2740222 - 2738852 - | transmembrane transport protein SCO2542 2741582 - 2740287 - | glucarate dehydratase SCO2543 2742547 - 2741579 - | 5-dehydro-4-deoxyglucarate dehydratase SCO2544 2742662 - 2743459 + | IclR family transcriptional regulator TERM 747 2743897 - 2743946 + G 93 -18.5 -3.59979 | gap 1, overlap 2743898 GGCTACGGCGCCGCC GCGCTCACCACCGCCGTCCCGGCC GTC GTCCTGGGCG-CGGTGGTGGGCGG TTTCGGATCGGGGAC TERM 748 2743898 - 2743945 + G 87 -22 -2.75844 | gap 1, overlap 2743897 GCTACGGCGCCGCCG CGCTCACCACCGCCGTCCCGGCC GTC GTCCTGGGCG-CGGTGGTGGGCG GTTTCGGATCGGGGA SCO2545 2743633 - 2744982 + | transmembrane efflux protein SCO2546 2746024 - 2745002 - | adenosine deaminase SCO2547 2746926 - 2746021 - | ribonuclease Z SCO2548 2747308 - 2746955 - | Hit-family protein SCO2549 2750867 - 2747664 - | protease SCO2550 2751450 - 2750935 - | lipoprotein SCO2551 2751556 - 2751900 + | hypothetical protein SCO2552 2752690 - 2751941 - | hypothetical protein SCO2553 2753781 - 2752687 - | oxidoreductase SCO2554 2755006 - 2753870 - | DnaJ protein hrcA 2756023 - 2755007 - | heat-inducible transcription repressor SCO2556 2756208 - 2756951 + | hypothetical protein SCO2557 2756986 - 2757810 + | hypothetical protein SCO2558 2758462 - 2757788 - | hypothetical protein SCO2559 2759789 - 2758482 - | coproporphyrinogen III oxidase SCO2560 2762177 - 2759799 - | hypothetical protein SCO2561 2764346 - 2762403 - | long-chain fatty-acid CoA ligase SCO2562 2766456 - 2764588 - | GTP-binding protein LepA rpsT 2766694 - 2766960 + | 30S ribosomal protein S20 TERM 749 2767101 - 2767141 + T 100 -26.2 -3.12351 | overlap 2767100 CGAGCTTGATCCGAA GGCCCCGGTGGCCGTCCT TCCCC AGGACGGACGCCGGGGCC TTCGGTGTGAGCGGG SCO2564 2768278 - 2767268 - | DNA-binding protein SCO2565 2768544 - 2768323 - | hypothetical protein SCO2566 2769481 - 2768600 - | hypothetical protein SCO2567 2772445 - 2769878 - | integral membrane protein SCO2568 2773509 - 2772442 - | DNA-binding protein TERM 750 2772914 - 2772957 + g 81 -16.6 -3.55761 | GCCGCCGCCTTGGGT CCGGACCCGCCGGCCGTG TCGCGGTC CTCGGCCGTCGGCTCCGG TTTCCCGGCTCCGTA SCO2569 2774499 - 2773654 - | hypothetical protein SCO2570 2775367 - 2774591 - | secreted protein TERM 751 2775498 - 2775448 - R 95 -20.4 -3.59979 | overlap 2775453 2775479 CTCTTCCACGGTAAA CGCAACGGGCAGGCCCAGGGTTCC GCA AGAACCCCGAACCTGCCCGCACCG GACCCGTAGGGGGCG TERM 752 2775493 - 2775453 - R 100 -24.1 -3.28497 | overlap 2775448 2775479 CCACGGTAAACGCAA CGGGCAGGCCCAGGGTTCC GCA AGAACCCCGAACCTGCCCG CACCGGACCCGTAGG leuS 2778436 - 2775536 - | leucyl-tRNA synthetase TERM 753 2778538 - 2778519 - H 91 -9.3 -4.98531 | overlap 2778534 CCGGGAAATGAAAAA TCCCCTC GCACAG GAGGGGA CGCCGCGCCGATTCC TERM 754 2780218 - 2780174 - g 72 -14.1 -3.33696 | overlap 2780175 CCGCCCCCGAACCAA CCCCCGGTGCGCCGTCGCCGT CCC ACGACTTCGACGCACCGGGTT CCGGTGAACCTTGGA TERM 755 2780217 - 2780175 - g 73 -17.6 -2.60075 | overlap 2780174 CGCCCCCGAACCAAC CCCCGGTGCGCCGTCGCCGT CCC ACGACTTCGACGCACCGGGT TCCGGTGAACCTTGG SCO2572 2778973 - 2780259 + | integral membrane protein TERM 756 2780504 - 2780468 - g 95 -20.1 -3.78934 | CCCCTTCCACAAGAA GCTGCGCTCGGTCGCCG AGG CGGCGATCAAGCGCGGC GTACGGCCGGTCGTG SCO2573 2780292 - 2781866 + | oxidoreductase TERM 757 2781884 - 2781908 + T 100 -21.5 -3.74251 | opp_overlap 2781884 CCGCGGACGACGAAA CCCCCCGGATC AGG GATCCGGGGGG TTTCGTCGAACTGTG TERM 758 2781908 - 2781884 - T 100 -21.5 -3.78775 | opp_overlap 2781884 CCGCGGACGACGAAA CCCCCCGGATC AGG GATCCGGGGGG TTTCGTCGAACTGTG SCO2574 2782384 - 2782151 - | hypothetical protein SCO2575 2782615 - 2782388 - | hypothetical protein TERM 759 2782724 - 2782747 + r 70 -13.8 -3.19389 | opp_overlap 2782724 GGCGGAGACGAAAAA TCCCGCCCCC CGAA GGGGACGGGA TTCGTCCGTGGGTTG TERM 760 2782747 - 2782724 - R 100 -16 -4.8048 | opp_overlap 2782724 GGCGGAGACGAAAAA TCCCGCCCCC CGAA GGGGACGGGA TTCGTCCGTGGGTTG SCO2576 2783615 - 2782944 - | phosphoglycerate mutase SCO2577 2784058 - 2783612 - | hypothetical protein TERM 761 2784003 - 2784022 + g 70 -16.4 -2.53112 | overlap 2784005 TGCGCGAGCTTGTCG GCCGCCGC CTGG GCGGCGGC GTTGATGAGTTCGAT SCO2578 2785929 - 2784151 - | membrane protein nadD 2786662 - 2785946 - | nicotinic acid mononucleotide adenylyltransferase SCO2580 2786889 - 2786722 - | membrane protein SCO2581 2787181 - 2786987 - | membrane protein SCO2582 2787290 - 2788498 + | hypothetical protein SCO2583 2789582 - 2788512 - | membrane protein SCO2584 2790355 - 2789669 - | membrane protein proA 2791648 - 2790362 - | gamma-glutamyl phosphate reductase SCO2586 2792250 - 2791720 - | hypothetical protein SCO2587 2793510 - 2792386 - | gamma-glutamyl kinase TERM 762 2795475 - 2795499 + G 70 -14.3 -3.28712 | CGCATGGCTCGCCCG GTACCGGCCGA CGG TCGGCCTGTAC TTCTCGGGCGGGGCG SCO2588 2794753 - 2796912 + | integral membrane protein SCO2589 2797141 - 2799372 + | glycosyl transferase TERM 763 2801232 - 2801210 - g 71 -12.6 -3.47227 | overlap 2801211 CGTGAAGGAGGAGAA CGCGGCCGGC GGT GCCGACCCCG CGGCCGCCTCCCGGC SCO2590 2799396 - 2802989 + | glycosyltransferase TERM 764 2802997 - 2803039 + F 100 -27.8 -3.64703 | AGGTCTGAACCGTCA CGCCGAAGCCGGGCCCGG GACTGCG CGGGGCCCGGCTTCGGCG TTTCCATGCCGGAAA SCO2591 2803160 - 2804890 + | secreted protein TERM 765 2804941 - 2804908 - T 100 -29.7 -3.27498 | CACACCGCACACGAA GGGGGCTGCCGGCAC GTGC GTGCCGGCAGCCCCC TCCCCGTTGCCCGGG SCO2592 2807795 - 2804967 - | transferase TERM 766 2807752 - 2807788 + g 76 -5.7 -4.44819 | overlap 2807753 2807784 ACGGCCTGTTCCGTG CCGCCCATCTCGTCACC CCA GGTGAGGAGAAAGGTGA TTTTCATCTGTTGTC SCO2593 2808791 - 2807802 - | hypothetical protein SCO2594 2810599 - 2808791 - | hypothetical protein obgE 2812247 - 2810811 - | GTPase ObgE TERM 767 2812341 - 2812305 - R 90 -16.6 -3.66803 | gap 1 GGGTAACACGCGAAA GGCGGACC-CGCTTCCC CTCG GGGAAGTGAGGCCCGCC TCGCGAAAGTGTCCG rpmA 2812612 - 2812358 - | 50S ribosomal protein L27 rplU 2812947 - 2812627 - | 50S ribosomal protein L21 SCO2598 2814168 - 2813146 - | dehydrogenase TERM 768 2813613 - 2813635 + g 70 -12.6 -3.33261 | overlap 2813586 CGGCCTGCCGGGCGA GGGCGGCGGC GAG GCCGTCGACC TTCTCCCCGTTCACC TERM 769 2814324 - 2814279 - R 100 -40.7 -3.53012 | GGGCGGCCGGGGAAA CGTGTGGCCCCGGCCGAACGG GATT CCGTTCGGCCGGGGCCACACG TCGTGCGACAGGTGC TERM 770 2814384 - 2814420 + r 75 -13 -3.61715 | overlap 2814391 GTCGGTGGCGGCCGA GACCGAGGACGG-CGCCT GCT GGGCGGCCG-CCGCGGTC TTCTTCGACGCCGTC SCO2599 2818382 - 2814360 - | hypothetical protein TERM 771 2814531 - 2814555 + g 72 -12.1 -3.65201 | overlap 2814516 2814531 GGCCGCGGTCTTCTT GGTGGCGGC CTTCTTC GCCGCCGCC TTCTTGGCCGTCTTG SCO2600 2819433 - 2818657 - | hypothetical protein TERM 772 2818818 - 2818770 - G 71 -15.2 -3.08679 | gap 2 TCTCTTCATCGAACA GCCCCTGCGCCAGCCTGGTCACCG CTG CGGGGACC-GGC-GGCGCCAGGTC GGCCACGGCGCGAAG SCO2601 2820558 - 2819482 - | integral membrane protein SCO2602 2822731 - 2820608 - | hypothetical protein SCO2603 2823656 - 2825212 + | integrase SCO2604 2826283 - 2825348 - | secreted protein SCO2605 2826447 - 2827148 + | hypothetical protein SCO2606 2829381 - 2827396 - | hypothetical protein TERM 773 2829410 - 2829372 - G 77 -16.8 -3.28712 | gap 1 TTCGTGTGCTGACAA GGGGGACCA-TCCAGCC TAACCC GGCCGGACCGGTCCCCC TTACCGCTCACCCCC SCO2607 2830656 - 2829460 - | Sfr protein SCO2608 2832962 - 2830653 - | penicillin binding protein TERM 774 2830696 - 2830752 + g 91 -21.3 -3.34233 | overlap 2830697 2830748 CTGCCGCCCGGCCGG GCGCCGCGCCCGGCGCCGCGTGCGCCG CCG CGCCGCCGGTGGCGCCGGGTGTCGCGG TTCTCCCCGTTCTGG TERM 775 2830697 - 2830751 + g 93 -24.8 -2.60219 | overlap 2830696 2830748 TGCCGCCCGGCCGGG CGCCGCGCCCGGCGCCGCGTGCGCCG CCG CGCCGCCGGTGGCGCCGGGTGTCGCG GTTCTCCCCGTTCTG SCO2609 2833686 - 2833015 - | rod shape-determining protein SCO2610 2834725 - 2833700 - | rod shape-determining protein TERM 776 2834897 - 2834855 - R 80 -17.1 -3.26319 | gap 1, opp_overlap 2834852, overlap 2834858 AACCCTCTATATCAA CGA-TCCGCCGCACGAGAGG AGAT CGTCTCGTACGGCGGAACCG AAGTGTTACGTCATC TERM 777 2834893 - 2834858 - R 86 -19.8 -2.81547 | opp_overlap 2834852, overlap 2834855 CCTCTATATCAACGA TCCGCCGCACGAGAGG AGAT CGTCTCGTACGGCGGA ACCGAAGTGTTACGT SCO2611 2835939 - 2834908 - | rod shape-determining protein SCO2612 2836660 - 2836247 - | nucleoside diphosphate kinase SCO2613 2837141 - 2836785 - | hypothetical protein SCO2614 2838482 - 2837148 - | folylpolyglutamate synthase valS 2841581 - 2838957 - | valyl-tRNA synthetase TERM 778 2841785 - 2841730 - g 70 -13.4 -3.39862 | AGGAATGAGTCACAA CCAGCCGGGCCCGTACGG--CGGGCAGC CCCA GCAGCCCGGACCGTACGG-CC-AGCCGG GCCCGTACGGTCAGC SCO2616 2841719 - 2842726 + | hypothetical protein TERM 779 2842732 - 2842710 - T 75 -10.6 -3.90291 | AGCTCCGCAAGGAAA TCCGCGTCAA GGC CTGACACGGA GCGGCAACGTGGAGG TERM 780 2842737 - 2842783 + T 100 -27.5 -3.16564 | gap 1, overlap 2842740 CCTGACACGGAGCGG CA-ACGTGGAGGGGGCCCGGTC GAGC GACCGGGCCCCCTCCACATGTG TTCGTACGGTGCGGC TERM 781 2842740 - 2842779 + T 100 -29.4 -3.13371 | overlap 2842737 GACACGGAGCGGCAA CGTGGAGGGGGCCCGGTC GAGC GACCGGGCCCCCTCCACA TGTGTTCGTACGGTG clpX 2844084 - 2842798 - | ATP-dependent protease ATP-binding subunit SCO2618 2844986 - 2844276 - | ATP-dependent Clp protease proteolytic subunit SCO2619 2845696 - 2845037 - | ATP dependent Clp protease proteolytic subunit 1 TERM 782 2845938 - 2845968 + r 95 -20.5 -3.61178 | gap 1, opp_overlap 2845938 CCTGCCCTATACGAA CGGGCCCCGG-CGT CGGA ACGTCCGGGGCCCG TTTCACATCCGTCGG TERM 783 2845968 - 2845938 - R 87 -20.5 -3.25823 | gap 1, opp_overlap 2845938 CCTGCCCTATACGAA CGGGCCCCGG-CGT CGGA ACGTCCGGGGCCCG TTTCACATCCGTCGG tig 2847406 - 2846000 - | trigger factor TERM 784 2847893 - 2847931 + r 100 -34 -3.89346 | TCGCCCGCTCCGAGA GGCCTCCGGCCCGGTCCC GCA GGGATCGGGCCGGAGGCC TTTGTGCGGTCCCGG SCO2621 2848177 - 2847983 - | hypothetical protein TERM 785 2848775 - 2848792 + H 72 -3.3 -4.56597 | overlap 2848782 CCAGAGCAGCGAGGT CCTGTGA CTAC TCGCCGG TTTTTCGGCGGGGGG SCO2622 2848812 - 2849981 + | integral membrane protein TERM 786 2849998 - 2850039 + T 88 -21.7 -2.62983 | overlap 2850009 2850012 2850035 ACCGGTGGGTCACCC CTGACCGAGAAGGGCGCGC ATCC GCGTGTACTTCTCGGTCAG TCGTGTGCGGGTGGC SCO2623 2850486 - 2849992 - | hypothetical protein SCO2624 2851697 - 2850510 - | integral membrane protein SCO2625 2851911 - 2853152 + | hypothetical protein SCO2626 2854005 - 2853163 - | DNA repair hydrolase (fragment) SCO2627 2854591 - 2854112 - | ribose-5-phosphate isomerase B SCO2628 2854806 - 2856074 + | amino acid permease SCO2629 2856104 - 2856250 + | hypothetical protein TERM 787 2856311 - 2856264 - T 100 -37.2 -3.53224 | opp_overlap 2856271 GACCCCGCGGGGAAA CGGAAGAGGCTCGCCGGGGCGC TGTC GCGCTCCGGCGAGCCTCTTCCG CGTGGACCCGCGGCC TERM 788 2856271 - 2856304 + T 100 -27.5 -3.04144 | opp_overlap 2856264 CGGGGAAACGGAAGA GGCTCGCCGGGGCGC TGTC GCGCTCCGGCGAGCC TCTTCCGCGTGGACC SCO2630 2857072 - 2856329 - | biotin synthase SCO2631 2857300 - 2858685 + | amino acid permease SCO2632 2858918 - 2859937 + | transposase TERM 789 2859959 - 2859988 + F 100 -26.5 -3.83026 | opp_overlap 2859938 CCGCGAGGCTCCCGA GGGCCCCCGCACG AAGC CGTGCGGGGGCCC TTTCGTGTGCGCCGG SCO2633 2860089 - 2860730 + | superoxide dismutase [Fe-Zn] TERM 790 2860830 - 2860792 - T 90 -21.8 -2.70932 | opp_overlap 2860796 2860828, overlap 2860796 GGGCGGGCGGAATGA GGAAGGCCCCCGCGAG GACGTGA CTCGCGGGGGCCTTCT GTGCGCCGGCACGGC TERM 791 2860796 - 2860826 + T 100 -21.2 -3.48276 | opp_overlap 2860792 2860796 GGGCGGAATGAGGAA GGCCCCCGCGAG GACGTGA CTCGCGGGGGCC TTCTGTGCGCCGGCA TERM 792 2860826 - 2860796 - T 93 -21.2 -3.27298 | opp_overlap 2860796, overlap 2860792 GGGCGGAATGAGGAA GGCCCCCGCGAG GACGTGA CTCGCGGGGGCC TTCTGTGCGCCGGCA SCO2634 2861496 - 2860846 - | hypothetical protein SCO2635 2861702 - 2864203 + | aminopeptidase TERM 793 2864392 - 2864421 + F 82 -12.8 -4.11216 | opp_overlap 2864385 2864382 CAATAGCAGCCGTAA CCCCTGGGCCGC ACGGTG GTGGACCAGGGG TTTTCGGCATCCGAA SCO2636 2864407 - 2865597 + | hypothetical protein TERM 794 2868294 - 2868270 - g 72 -12.1 -3.61398 | opp_overlap 2868267 2868264, overlap 2868252 CTTCTCCGCGAAGAA CTCGGTGCAGC GCA ACAGCACCGAG TCGTACTTCGTGACC SCO2637 2865913 - 2869209 + | serine protease (secreted protein) TERM 795 2869229 - 2869260 + T 100 -25.2 -3.59979 | gap 1 GTGCGGTACGGAGAG GGGGCGGGCGCGCCG GTT CGG-GCGCCCGCCCC TTTCGCCTGCCCCGC SCO2638 2870030 - 2869281 - | hypothetical protein SCO2639 2870658 - 2870032 - | RNA polymerase sigma factor TERM 796 2870460 - 2870490 + g 70 -13.8 -3.2614 | CCGCCTGCGGCACCC CGCCGAGCGCGAGC ACC GCCCGCACCCGGCG TTCCTGTGCCGCGTC SCO2640 2870836 - 2871858 + | aspartate-semialdehyde dehydrogenase TERM 797 2872058 - 2872080 + G 71 -13.5 -3.56092 | GACCTGGCGGCAGGG CGTCCACGT ACCGG ACGTGGACG TTTCGGCCCTGCTGC SCO2641 2871981 - 2873168 + | resistance protein SCO2642 2873657 - 2873181 - | hypothetical protein SCO2643 2873770 - 2876343 + | aminopeptidase N SCO2644 2877352 - 2876450 - | LysR family transcriptional regulator SCO2645 2878338 - 2877382 - | integral membrane protein SCO2646 2879334 - 2878372 - | integral membrane protein SCO2647 2879447 - 2879965 + | MarR family regulatory protein SCO2648 2880369 - 2880082 - | hypothetical protein SCO2649 2882590 - 2880455 - | 4-alpha-glucanotransferase SCO2650 2882911 - 2882600 - | secreted protein SCO2651 2883956 - 2883219 - | dehydrogenase/reductase (secreted protein) SCO2652 2884084 - 2884518 + | hypothetical protein SCO2653 2884761 - 2885426 + | hypothetical protein SCO2654 2885483 - 2886067 + | hypothetical protein SCO2655 2886641 - 2886105 - | hypothetical protein SCO2656 2886859 - 2888085 + | hypothetical protein TERM 798 2888104 - 2888141 + F 100 -29.3 -3.07344 | opp_overlap 2888082 CGCCCGGCGCGCTTC CCGCCCCCGAGGTAACG ACTG CGTTGCCTCGGGGGCGG TCTCTTGACGGCTCC SCO2657 2888297 - 2889526 + | transcriptional regulator TERM 799 2889638 - 2889622 - g 73 -5 -4.4727 | GGAATATCCAGAAAA GCGGCC CTCGC GGTCGC CGCCTCCGCCTCCCT TERM 800 2890113 - 2890095 - g 73 -10.2 -3.84406 | CCTCTACTACAACAA GGACGCCT TCG AGGCGGCC GGGATCAAGGCCCCG SCO2658 2889601 - 2890938 + | secreted sugar-binding protein SCO2659 2890945 - 2891889 + | sugar transport system permease protein SCO2660 2891886 - 2892797 + | sugar transport membrane protein SCO2661 2892805 - 2894070 + | sugar hydrolase SCO2662 2894115 - 2895032 + | kinase TERM 801 2895033 - 2895067 + F 87 -20 -3.14211 | opp_overlap 2895051, overlap 2895035 CACTTCACCGCCTGA GCCGCCACGGGAACCG AAC CGGTTCCCGTGGCGTA TTCATGGGCAGGGGT TERM 802 2895035 - 2895065 + F 100 -27 -3.13403 | opp_overlap 2895051, overlap 2895033 CTTCACCGCCTGAGC CGCCACGGGAACCG AAC CGGTTCCCGTGGCG TATTCATGGGCAGGG TERM 803 2895819 - 2895780 - g 71 -12.8 -3.55487 | gap 1, overlap 2895783 CTACACGAAGGAGAA CCAGCGGCTGGGCGCCGAC TAC GGCGACGCCCAGCC-CTAC CCCTGGGCGGCGATC TERM 804 2895816 - 2895783 - g 72 -16.7 -2.90161 | gap 1, overlap 2895780 CACGAAGGAGAACCA GCGGCTGGGCGCCGAC TAC GGCGACGCCCAGCC-C TACCCCTGGGCGGCG SCO2663 2895262 - 2896551 + | secreted protein SCO2664 2896634 - 2897692 + | sugar-binding protein SCO2665 2897763 - 2899097 + | hypothetical protein SCO2666 2899173 - 2901884 + | serine/threonine protein kinase TERM 805 2902055 - 2902037 - g 78 -17.4 -3.14344 | GACCCTGGCCATCAA CGGCGCGG TGC CCGCGCCG GACGGCGTGGACTGG TERM 806 2903343 - 2903286 - g 70 -14.6 -3.18768 | overlap 2903284 CACGACAACGTAACA GTGGCCCTCCTGCCGTTCCCGGCCCC GCCGCA GGGGGCAGGATCGGCCTGAGGCCCCC GCACGGCCACGGGTG SCO2667 2901888 - 2903336 + | hypothetical protein SCO2668 2903439 - 2904797 + | hypothetical protein SCO2669 2904844 - 2906658 + | hypothetical protein SCO2670 2907651 - 2906677 - | O-methyltransferase TERM 807 2906863 - 2906895 + g 79 -18.4 -2.87132 | gap 1, opp_overlap 2906853 2906846 2906845 GAACAGGTCGTCCTC CCGGGCCCGGCGCGG TACG CCGC-CCAGGCCCGG TGTCTCGGGCGCGGC SCO2671 2907738 - 2908151 + | globin SCO2672 2908366 - 2911707 + | hypothetical protein TERM 808 2912188 - 2912167 - g 84 -2.1 -4.87665 | gap 1 CGTCATCGACAAAAA GCGGTCCTCC TAC GGCGT-CCGC AGCACCGACACCCTG SCO2673 2911856 - 2914579 + | hypothetical protein SCO2674 2914632 - 2915591 + | ABC transporter ATP-binding protein SCO2675 2916332 - 2915616 - | hypothetical protein TERM 809 2916306 - 2916288 - G 70 -13.8 -3.2614 | CAGCCGGGAGAGGAA GGCCGCGA GAT CCGCGGCC TCCCCCTCGTCGGCG SCO2676 2916745 - 2916335 - | hypothetical protein SCO2677 2918391 - 2916748 - | putative ABC transporter ATP-binding protein TERM 810 2916785 - 2916817 + g 82 -13.4 -4.05004 | gap 1, overlap 2916769 TAGGTGGCGCGGTGC GGACGGGCGGCGTCG GCGC CGA-GCCGCTCGACC TTGTTCTTCTCGTAC SCO2678 2918653 - 2919168 + | hypothetical protein SCO2679 2919678 - 2919307 - | lipoprotein SCO2680 2920007 - 2920477 + | hypothetical protein SCO2681 2920476 - 2922815 + | ATP /GTP-binding protein SCO2682 2924292 - 2922880 - | hypothetical protein SCO2683 2924985 - 2924515 - | single-strand DNA-binding protein SCO2684 2927738 - 2925258 - | ATP-binding membrane protein SCO2685 2929349 - 2927742 - | ATP-binding protein SCC61A06c SCO2686 2930839 - 2929823 - | LuxR family transcriptional regulator ribA 2931148 - 2931792 + | GTP cyclohydrolase II SCO2688 2931848 - 2932993 + | riboflavin-specific deaminase SCO2689 2932990 - 2934117 + | hypothetical protein TERM 811 2934766 - 2934737 - g 71 -13.5 -3.45023 | gap 1, overlap 2934738 GGAGGAGCAGGAGAA CCCCGGCCGGCCGG CCC CCGGCTGGC-GGGA CGCCTTCACGGATCA SCO2690 2934114 - 2935478 + | membrane transport protein SCO2691 2935475 - 2936632 + | hypothetical protein SCO2692 2936812 - 2938692 + | repetative protein SCO2693 2938689 - 2939690 + | oxygenase (secreted protein) TERM 812 2939797 - 2939839 + G 81 -18.3 -3.04792 | ATCTGCGCGATCTGG CGAGTGAGCAGGCCGGCCG GCCCA CGGCCGGCCTGCGAGCCCG TCTTCGCGCTCCTGC SCO2694 2939719 - 2940261 + | hypothetical protein SCO2695 2940382 - 2941152 + | hypothetical protein SCO2696 2941209 - 2942201 + | 2-hydroxyacid dehydrogenase SCO2697 2942786 - 2942208 - | secreted protein TERM 813 2942611 - 2942572 - Gf 85 -17 -3.53811 | opp_overlap 2942607 GCCAGCTCCCGGAAA CGGCCGTGGGCGACGACG AGTC CGCCGTCGTCCCCGGACG TCACCACGCCCTGCT SCO2698 2942785 - 2942904 + | small hydrophilic protein SCO2699 2943092 - 2943364 + | small membrane protein SCO2700 2944322 - 2943456 - | tyrosinase (monophenol monooxygenase) SCO2701 2944875 - 2944306 - | tyrosinase co-factor SCO2702 2945510 - 2944995 - | secreted protein SCO2703 2945917 - 2945615 - | hypothetical protein TERM 814 2946076 - 2946038 - R 100 -23.2 -3.64703 | CTCCGGGCACGGAAA GGGCCGCCGCACCTCC GAAAGGG GGAGGCGCGACGGCCC GGAACGCCGTGGGGG SCO2704 2946828 - 2946094 - | secreted protein SCO2705 2947370 - 2947104 - | hypothetical protein SCO2706 2947584 - 2948894 + | transferase TERM 815 2949480 - 2949512 + G 76 -18.4 -2.62184 | gap 1 CGGTCGGCATCGTCA CCGGC-GGCCCGGGC GGCG GCACGGGCCTGCCGG TGCTGTCCACGGACG SCO2707 2948891 - 2950345 + | transferase SCO2708 2950351 - 2951667 + | integral membrane protein TERM 816 2952077 - 2952098 + G 72 -12.3 -3.61398 | gap 1 GGTGCTCGGGCTGGT CCGGGACCAG GCG CTGG-CCCGG TTGTTCGGGGCCGGC TERM 817 2953412 - 2953467 + G 74 -16.7 -3.14051 | gap 1, overlap 2953446 GGCGGCGGACCGGGT CGCCGACGGCGGT-GCCGCCCTCTCG CTGGC CGTGGGCGCCGCGACCGTCGGCGGCG TCTTCGTCGCCCTCG TERM 818 2953487 - 2953506 + G 70 -12.8 -3.3164 | overlap 2953496 2953500 CGTCGCCCTCGGTCT GGCCCTGG GCGT CCGGGGCC TTCTCCCCGTCCGTT SCO2709 2952033 - 2953604 + | integral membrane protein SCO2710 2953648 - 2954337 + | polysaccharide deacetylase SCO2711 2954348 - 2955550 + | glycosyl transferase SCO2712 2955547 - 2956266 + | hypothetical protein SCO2713 2956263 - 2957411 + | hypothetical protein SCO2714 2958636 - 2957449 - | secreted protein TERM 819 2958589 - 2958559 - G 93 -21.8 -3.14132 | GCCCGCGGCGAGGAA CGCCGCCGCCGCGA TCG CCGCGGCCGCGGCG TGCGCCGGACGCCGC TERM 820 2959005 - 2959042 + G 87 -22.7 -2.73364 | gap 1 GATCGCGGCGGTCCT GCGCCGCGTCGCCGCGCG GCT CGCGCGGCC-CGCGGTGC TGATTCCGATGGACG SCO2715 2958781 - 2960079 + | hypothetical protein SCO2716 2960928 - 2960170 - | secreted protein TERM 821 2961073 - 2961038 - R 87 -11.9 -4.24123 | gap 1, overlap 2961030 GCAAGAAGGGGAAAA GCCGGCCCCGAACCAA ACGAG TTGGC-CAAGGCCGGC CATGACGCAGCCGGT TERM 822 2961091 - 2961119 + r 79 -14 -3.61398 | gap 1 TGACGCAGCCGGTCG GTGCG-GAACGAC GTCA GTCGTTCTCGCAC TTGTTGCCGAACGCC SCO2717 2961331 - 2961104 - | small membrane protein SCO2718 2962014 - 2961619 - | secreted protein TERM 823 2962151 - 2962135 - H 83 -7.9 -4.61527 | overlap 2962136 2962137 AAAACGCCGCAAAAA TCCCCGG AAT CCCGGGA GGAAACGCGGACCCG SCO2719 2962235 - 2962678 + | secreted protein TERM 824 2962689 - 2962721 + T 100 -28.5 -3.61178 | GCTGACATCGCCCCG GGGCGGGCCGCCGAG CAC TTCGGCGGCCCGCCC TTTCGCATGCCTGCA SCO2720 2964695 - 2962767 - | long-chain fatty acid ligase SCO2721 2966458 - 2964860 - | lipoprotein TERM 825 2966636 - 2966610 - R 72 -11.5 -3.72576 | TCTGGTCGCAGGAAA GACGCGGTGCC TCATC GACCCCGCGTC TGCGGCATGATCCGC SCO2722 2967589 - 2966690 - | integral membrane protein SCO2723 2970186 - 2967586 - | ABC transporter ATP-binding protein SCO2724 2971884 - 2970454 - | amino acid transporter TERM 826 2972167 - 2972135 - H 90 -8.9 -5.00616 | overlap 2972136 GGCGGGCCGAAAAAA CCCGTCGCCGTCCGG TAT CCGGACGCTGTCGGT GGGGGCCGGTAGAGT TERM 827 2972166 - 2972136 - H 75 -12.4 -3.60048 | overlap 2972135 GCGGGCCGAAAAAAC CCGTCGCCGTCCGG TAT CCGGACGCTGTCGG TGGGGGCCGGTAGAG SCO2725 2972229 - 2973086 + | lipoprotein SCO2726 2974646 - 2973144 - | methylmalonic acid semialdehyde dehydrogenase SCO2727 2975038 - 2974661 - | hypothetical protein TERM 828 2975273 - 2975241 - g 71 -4 -4.37092 | gap 1, opp_overlap 2975263, overlap 2975207 2975242 ACTCGTGTCACAAAA GCGCCCGCCGCGTCA CACA TGTCAC-GCGCACGC GGGTCTTCCGTCACA SCO2728 2975219 - 2975617 + | hypothetical protein TERM 829 2975709 - 2975672 - f 84 -11.1 -4.18018 | GGGGCGGAGGGAAAA CCGTTCAGTGCCCCACC GCCG GGTGGGGCACAGTGCCG TGCATGGACTTCTCC SCO2729 2975704 - 2976312 + | acetyltransferase SCO2730 2976325 - 2976630 + | regulator TERM 830 2977497 - 2977526 + G 77 -17.1 -3.21099 | CGCGAGGTGCGGATA CCGGTGGCCCGCC TGGC GGTGGGCGACCGG TTCGTCGTACGCCCC SCO2731 2976666 - 2978948 + | cation-transporting P-type ATPase SCO2732 2979586 - 2978987 - | integral-membrane protein SCO2733 2980422 - 2979583 - | hypothetical protein SCO2734 2980558 - 2981592 + | LysR family transcriptional regulator SCO2735 2981644 - 2982126 + | integral membrane protein TERM 831 2982613 - 2982664 + T 89 -21.8 -2.62983 | gap 3, overlap 2982616 2982652 CGCACCGGGACATGG GAAGGCGCCCTGGATCGTCGG-CCC GTGGG GGGACCGGCG--CCAGGGCGCCTTC TGCTGTCCGGGTCCG TERM 832 2982616 - 2982661 + T 87 -17.7 -3.4678 | gap 3, overlap 2982613 2982652 ACCGGGACATGGGAA GGCGCCCTGGATCGTCGG-CCC GTGGG GGGACCGGCG--CCAGGGCGCC TTCTGCTGTCCGGGT TERM 833 2982736 - 2982708 - T 95 -16.8 -4.1899 | CCACGGCACGGAAAA GTCCCGTACCAC TCGGG GCGGTACGGGAC TCACCAGACGCGCTG gltA 2984058 - 2982769 - | type II citrate synthase TERM 834 2983155 - 2983171 + g 71 -7.9 -3.97139 | GGCCGAAGCCCATCA GGCGGAC GCC GTCCTCC TTGTTCTTCACCTTG TERM 835 2984163 - 2984187 + r 70 -14.3 -3.23216 | overlap 2984164 TCGACCATCGGGCCT ATTGGCGGCAC TCA GTGCCGCCAAC TTCCTCATCCTGCCC TERM 836 2984164 - 2984186 + r 78 -17.8 -2.53715 | overlap 2984163 CGACCATCGGGCCTA TTGGCGGCAC TCA GTGCCGCCAA CTTCCTCATCCTGCC SCO2737 2986557 - 2984296 - | deoxyribonuclease SCO2738 2986902 - 2986705 - | hypothetical protein SCO2739 2987096 - 2986899 - | hypothetical protein SCO2741 2987625 - 2988134 + | secreted protein SCO2742 2989145 - 2988198 - | sigma factor SCO2743 2989276 - 2989761 + | hypothetical protein SCO2744 2990122 - 2989772 - | hypothetical protein SCO2745 2990408 - 2991451 + | LacI family transcriptional regulator SCO2746 2991448 - 2993001 + | ABC transporter protein, ATP binding component SCO2747 2992991 - 2994946 + | bifunctional carbohydrate binding and transport protein SCO2748 2994994 - 2995914 + | carbohydrate kinase SCO2749 2995911 - 2996300 + | D-ribose pyranase TERM 837 2996377 - 2996339 - T 70 -13 -3.28924 | opp_overlap 2996340 2996341, overlap 2996340 GACCGGTGTGGAGAA GTTTGAGAGGGCCCGGTC GCC GACCGGGCCCTCTCGGGT TTCCCCTCCCCTTCG TERM 838 2996376 - 2996340 - T 71 -16.5 -2.57211 | opp_overlap 2996340 2996341, overlap 2996339 ACCGGTGTGGAGAAG TTTGAGAGGGCCCGGTC GCC GACCGGGCCCTCTCGGG TTTCCCCTCCCCTTC TERM 839 2996340 - 2996376 + T 100 -23.1 -3.61103 | opp_overlap 2996340 2996339, overlap 2996341 ACCGGTGTGGAGAAG TTTGAGAGGGCCCGGTC GCC GACCGGGCCCTCTCGGG TTTCCCCTCCCCTTC TERM 840 2996341 - 2996375 + T 95 -24.4 -2.7634 | opp_overlap 2996340 2996339, overlap 2996340 CCGGTGTGGAGAAGT TTGAGAGGGCCCGGTC GCC GACCGGGCCCTCTCGG GTTTCCCCTCCCCTT SCO2750 2997352 - 2996489 - | hypothetical protein SCO2751 2998515 - 2997349 - | hypothetical protein SCO2752 2999648 - 2998512 - | oxidoreductase SCO2753 2999879 - 3000925 + | LacI family transcriptional regulator SCO2754 3001125 - 3001931 + | hypothetical protein SCO2755 3002577 - 3001915 - | acetyltransferase SCO2756 3003509 - 3002574 - | integral membrane protein SCO2757 3003658 - 3004599 + | LysR family transcriptional regulator SCO2758 3004794 - 3006641 + | beta-N-acetylglucosaminidase (secreted protein) SCO2759 3008032 - 3006815 - | transposase SCO2760 3008299 - 3008949 + | membrane protein SCO2761 3010411 - 3008987 - | secreted tripeptidyl aminopeptidase SCO2762 3010867 - 3010475 - | secreted protein SCO2763 3014708 - 3010977 - | ABC transporter protein, ATP-binding component SCO2764 3015818 - 3014808 - | lipoprotein TERM 841 3015831 - 3015847 + H 71 -8.7 -4.08767 | opp_overlap 3015831 3015832, overlap 3015832 CATAGGCAGGAGGAA TGGCCAA GAG TTGGCCG TTTTGCGAAGGTCAG SCO2765 3015897 - 3016268 + | hypothetical protein SCO2766 3016395 - 3017255 + | secreted ribonuclease SCO2767 3019491 - 3017260 - | ATP/GTP-binding protein TERM 842 3019059 - 3019002 - G 73 -17.6 -2.62983 | gap 2 GGTAGTGCCAGACCA GGT-CGGCCGC-GGCGCGCCGGCCGCCG GCCG CGGCGGCCAGTTCGCCGGCGGTGGCACC GCGGTCACCGGCGAC SCO2768 3019907 - 3019488 - | hypothetical protein SCO2769 3021661 - 3019967 - | acetolactate synthase SCO2770 3022626 - 3021658 - | agmatinase SCO2771 3022836 - 3023624 + | hypothetical protein SCO2772 3024614 - 3023634 - | membrane transport protein TERM 843 3024545 - 3024576 + g 93 -16.7 -3.97307 | gap 1 CCAGATTGGCGAAGG CGGCGACGAGCACC GTGAA GGTGCT-GTCGCCG TTCTTCTTCGCTCCG SCO2773 3025492 - 3024620 - | acyl CoA thioesterase II SCO2774 3026660 - 3025503 - | acyl-CoA dehydrogenase SCO2775 3027416 - 3026790 - | TetR family transcriptional regulator SCO2776 3027514 - 3029130 + | acetyl/propionyl CoA carboxylase, beta subunit SCO2777 3029169 - 3031109 + | acetyl/propionyl CoA carboxylase alpha subunit SCO2778 3031106 - 3032059 + | hydroxymethylglutaryl-CoA lyase SCO2779 3032065 - 3033225 + | acyl-CoA dehydrogenase SCO2780 3033355 - 3034404 + | secreted protein SCO2781 3034632 - 3035477 + | hypothetical protein SCO2782 3035641 - 3037083 + | pyridoxal-dependent decarboxylase SCO2783 3037106 - 3038347 + | monooxygenase SCO2784 3038344 - 3038898 + | aceytltranferase SCO2785 3038895 - 3040682 + | hypothetical protein SCO2786 3042359 - 3040752 - | beta-N-acetylhexosaminidase SCO2787 3042474 - 3043370 + | hypothetical protein TERM 844 3043398 - 3043419 + F 72 -11.5 -3.61398 | opp_overlap 3043399, overlap 3043399 ACAGCTTCCGCCAAC ACCTGCCCG ATAT CGGGCAGGA TTCTTGCGCAAGCAC TERM 845 3043418 - 3043399 - f 71 -15 -3.01924 | opp_overlap 3043399 3043398 CAGCTTCCGCCAACA CCTGCCCG ATAT CGGGCAGG ATTCTTGCGCAAGCA SCO2788 3043459 - 3043716 + | hypothetical protein TERM 846 3045410 - 3045375 - g 71 -11.1 -3.78934 | gap 1, overlap 3045399 CCTGCTGGAGAAGAA CCGC-GCGGCCCTGGA GGAGA TCAAGGCCCGCAGCGG TCAGATCCTCGCTGT SCO2789 3043786 - 3045603 + | glucosamine-fructose-6-phosphate aminotransferase SCO2790 3046146 - 3045619 - | hypothetical protein SCO2791 3046763 - 3046452 - | hypothetical protein TERM 847 3046755 - 3046734 - G 76 -4.3 -4.57073 | opp_overlap 3046737, overlap 3046735 3046737 CACGCTGGGGAAAAA GCACCGGTC GACT GACCGGTTT CCGCGCACAGTTCCG SCO2792 3047135 - 3048331 + | AraC family transcription regulator SCO2793 3048673 - 3049275 + | oligoribonuclease TERM 848 3049544 - 3049525 - T 73 -13.6 -3.28924 | GACGGCGTTCCACAA GCTTCCGG TGCT CCGGAAGC TTCCGGCGTTCCGAG TERM 849 3049834 - 3049796 - T 85 -16.7 -3.53444 | gap 1, opp_overlap 3049796 TCAGCGGTTGCCAAA GGGCGTAC-CCCGCCGGC GGTT GCCGGGGGGCGCACACCC TCTTACGACGACCTG SCO2794 3050892 - 3049837 - | LacI family transcriptional regulator TERM 850 3050751 - 3050788 + g 74 -16.4 -3.14132 | gap 3 CGACCGCCGCCTCGA CGGC-CGCC-CGGGTC-GC GTC GCTGACCCGCGGCGAGCCG TTGATCACGCGGGAG SCO2795 3051258 - 3052583 + | sugar binding secreted protein SCO2796 3052589 - 3053602 + | cellobiose transport permease TERM 851 3053674 - 3053636 - g 74 -11.6 -3.80841 | gap 1, overlap 3053637 ACGACCATGACGAAA CCCCCGGCCGACGCGGC ACCCGA GCCGCCCCGGC-GGGGC CGACGACGTTCCAAG SCO2797 3053615 - 3054526 + | cellobiose transport permease SCO2798 3054670 - 3056109 + | cellobiose hydrolase SCO2799 3057653 - 3056184 - | secreted sugar hydrolase SCO2800 3059226 - 3057814 - | two component system histidine kinase SCO2801 3059936 - 3059223 - | two component system response regulator SCO2802 3060038 - 3060619 + | secreted protein SCO2803 3061517 - 3060648 - | hypothetical protein SCO2804 3061961 - 3061566 - | hypothetical protein SCO2805 3062230 - 3063669 + | hypothetical protein SCO2806 3064564 - 3063968 - | mutase SCO2807 3064780 - 3065769 + | integral membrane protein SCO2808 3065876 - 3066904 + | secreted protein SCO2809 3066931 - 3068574 + | hypothetical protein SCO2810 3068571 - 3069932 + | hypothetical protein SCO2811 3070556 - 3070230 - | regulator TERM 852 3071864 - 3071827 - g 74 -16.9 -3.17392 | gap 1 GAGCGGGTAAGGGAA CGCCGGCGCCGGCCCGCC GAG GCCGTACCGGCGCCGG-G AACGGACGTACGGGA SCO2812 3070648 - 3071898 + | drug efflux protein SCO2813 3071960 - 3072526 + | hypothetical protein SCO2814 3073546 - 3072689 - | methyltransferase SCO2815 3073580 - 3074278 + | TetR family transcriptional regulator SCO2816 3074377 - 3075477 + | hypothetical protein SCO2817 3077357 - 3075453 - | hypothetical protein SCO2818 3077642 - 3078952 + | hypothetical protein TERM 853 3079121 - 3079069 - T 100 -22.8 -4.58283 | opp_overlap 3079082, overlap 3079072 GAAGCCGCGCAAAAA CAACGATGGCGAGGCCGGTTCGCG CTTTC CGCGAACACGCCTCGCCATCGCCA ACGTGCGCCGCCAGG TERM 854 3079118 - 3079072 - T 100 -26.7 -4.40561 | opp_overlap 3079082, overlap 3079069 GCCGCGCAAAAACAA CGATGGCGAGGCCGGTTCGCG CTTTC CGCGAACACGCCTCGCCATCG CCAACGTGCGCCGCC SCO2819 3079803 - 3079189 - | hypothetical protein TERM 855 3079295 - 3079245 - G 86 -8 -4.72272 | opp_overlap 3079261, overlap 3079251 3079293 CGGCGGGAGGAAAAA TCGAAATCCGCACCGCCGCGCGGG CCG CCCGCACGGCCGCCCAGAGCATGA TCTCCGGGCCGGGCA TERM 856 3079289 - 3079251 - G 93 -16.6 -4.01411 | opp_overlap 3079261, overlap 3079245 GAGGAAAAATCGAAA TCCGCACCGCCGCGCGGG CCG CCCGCACGGCCGCCCAGA GCATGATCTCCGGGC SCO2820 3080292 - 3079945 - | hypothetical protein TERM 857 3080432 - 3080390 - R 100 -32.8 -3.01712 | CGCGCCCGCGCAAGA GGGCGGGGCGTGCCCGGAGC CGC GATCCGGACACGCCCCGCCC GCCCGGCGGGGTCAG SCO2821 3082009 - 3080444 - | secreted pectate lyase TERM 858 3082351 - 3082384 + r 100 -24.7 -3.05384 | opp_overlap 3082354, overlap 3082354 CCCAGCGCTCGACGA GAACCCCGGTTCCGC TCAC GCGGGACCGGGGTTC TTCCGTGCGGCGGGC TERM 859 3082381 - 3082354 - R 86 -18.4 -3.40522 | opp_overlap 3082354 3082351 AGCGCTCGACGAGAA CCCCGGTTCCGC TCAC GCGGGACCGGGG TTCTTCCGTGCGGCG TERM 860 3082354 - 3082381 + r 95 -20.6 -3.67597 | opp_overlap 3082354, overlap 3082351 AGCGCTCGACGAGAA CCCCGGTTCCGC TCAC GCGGGACCGGGG TTCTTCCGTGCGGCG SCO2822 3083161 - 3082430 - | decarboxylase SCO2823 3084060 - 3083158 - | decarboxylase SCO2824 3084248 - 3085231 + | NAD-binding protein SCO2825 3085268 - 3086671 + | putative amidase SCO2826 3086692 - 3087165 + | hypothetical protein SCO2827 3087649 - 3087146 - | hypothetical protein TERM 861 3088356 - 3088402 + G 77 -17.2 -3.01712 | opp_overlap 3088343 CATCCTGATCGTCCC CGACCAGGTGGCCGGACTCAAC GCC GTCGAGTCCGGGCGCGTGGACG TCTTCGCGGGGACCG SCO2828 3087748 - 3088677 + | amino acid ABC transporter solute-binding protein SCO2829 3088674 - 3089375 + | amino acid ABC transporter transmembrane protein SCO2830 3089372 - 3090022 + | amino acid ABC transporter transmembrane protein TERM 862 3090065 - 3090046 - g 71 -4.2 -4.4017 | gap 1, overlap 3090047 CCAACCCCGAGAAAA GCCCCGAGC GCA GCTCCGG-C GAGCTGATCCGCCTG SCO2831 3090012 - 3090797 + | amino acid ABC transporter ATP-binding protein SCO2832 3090880 - 3091737 + | IclR family transcriptional regulator TERM 863 3091762 - 3091783 + T 71 -6.5 -4.30576 | overlap 3091764 GGCACTGGTCACGAG CACTGCCCG GGAC CGGGTAGTA TTTTCGTCGTCGCCG TERM 864 3091904 - 3091942 + T 100 -24.6 -3.02511 | opp_overlap 3091906 3091910 CCTGGCGGCGCACAG AAGGAAGGGCCCCCTCGC ACG GCGAGGGGGCCCTTCCGC TGTTCAGAAGGTGAC TERM 865 3091940 - 3091906 - T 100 -31.6 -3.48276 | opp_overlap 3091904, overlap 3091910 TGGCGGCGCACAGAA GGAAGGGCCCCCTCGC ACG GCGAGGGGGCCCTTCC GCTGTTCAGAAGGTG TERM 866 3091936 - 3091910 - T 100 -25.2 -3.49618 | opp_overlap 3091904, overlap 3091906 GGCGCACAGAAGGAA GGGCCCCCTCGC ACG GCGAGGGGGCCC TTCCGCTGTTCAGAA SCO2833 3092551 - 3091946 - | secreted chitin binding protein SCO2834 3093823 - 3092672 - | hypothetical protein SCO2835 3094941 - 3093880 - | membrane protein TERM 867 3097357 - 3097303 - g 81 -16.8 -3.5456 | overlap 3097299 3097300 3097304 AAGGCGAAGAAGCAA CCGCCGGTCGCGGCGGCGGAGCCCGC ACC GCGGGTCCCGCCGCAGCAGGCGCCGT ACGGACGGCACACGC TERM 868 3097356 - 3097304 - g 82 -20.3 -2.72013 | overlap 3097299 3097300 3097303 AGGCGAAGAAGCAAC CGCCGGTCGCGGCGGCGGAGCCCGC ACC GCGGGTCCCGCCGCAGCAGGCGCCG TACGGACGGCACACG SCO2836 3095506 - 3097467 + | glycosyl transferase TERM 869 3097530 - 3097472 - g 79 -14.2 -3.59031 | opp_overlap 3097478, overlap 3097470 3097473 GTAAGGAATGAAAGA CCGTGCCGGCCGCCGCCGCGCCCGTCGC TTC GCGATAGGCACGGCGGTGGTAGTCGCGC TGGCCGGGATGAACG TERM 870 3097529 - 3097473 - g 74 -17.7 -2.74696 | opp_overlap 3097478, overlap 3097470 3097472 TAAGGAATGAAAGAC CGTGCCGGCCGCCGCCGCGCCCGTCGC TTC GCGATAGGCACGGCGGTGGTAGTCGCG CTGGCCGGGATGAAC SCO2837 3097464 - 3099401 + | secreted protein SCO2838 3100500 - 3099502 - | secreted endoglucanase SCO2839 3101196 - 3100609 - | lipoprotein SCO2840 3101313 - 3102206 + | LysR family transcriptional regulator SCO2841 3102936 - 3102196 - | secreted protein SCO2842 3103493 - 3102939 - | membrane protein SCO2843 3104376 - 3103597 - | N-acetylglucosamine-6-phosphate deacetylase SCO2844 3104547 - 3104452 - | hypothetical protein SCO2845 3104891 - 3104547 - | GntR family transcriptional regulatory protein SCO2846 3106233 - 3105013 - | transcriptional regulatory protein SCO2847 3106290 - 3107372 + | oxidoreductase SCO2848 3107369 - 3107845 + | hypothetical protein SCO2849 3107953 - 3108825 + | hypothetical protein TERM 871 3108852 - 3108885 + T 89 -22.4 -2.64616 | overlap 3108876 GGGTGAACGCGCCCG CGCCGGCCGCGGGG TGAGAT CCCCGCGGCCTGCG TGGTGTGCGTCCGGG SCO2850 3109952 - 3109095 - | 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase SCO2851 3110833 - 3110120 - | membrane protein SCO2852 3111282 - 3110947 - | membrane protein SCO2853 3111894 - 3111340 - | hypothetical protein SCO2854 3111998 - 3113431 + | transmembrane efflux protein SCO2855 3113643 - 3114659 + | hypothetical protein SCO2856 3114765 - 3115223 + | hypothetical protein SCO2857 3115688 - 3115344 - | membrane protein SCO2858 3115960 - 3115703 - | hypothetical protein SCO2859 3116334 - 3115957 - | hypothetical protein SCO2860 3116931 - 3116521 - | rifampin ADP-ribosyl transferase TERM 872 3117410 - 3117367 - g 70 -13.6 -3.30159 | GCAACGCCGCGACAA CGCGCGCGGTGGCGGCCGGC CCCG GCCGCAGGCCACCCGGCGCG GACCTGACCGTCCAG SCO2861 3117159 - 3117881 + | hypothetical protein SCO2862 3118211 - 3117978 - | hypothetical protein TERM 873 3120767 - 3120803 + G 72 -16.7 -2.90496 | gap 1, overlap 3120764 CGAGATACTGGCCGC TCTCGGCATC-GCCCG GTTCGG CGGGCAGATGCCGAGG TCCTTTGCCCAGGGC SCO2863 3118362 - 3121199 + | helicase SCO2864 3121892 - 3121344 - | hypothetical protein SCO2865 3122091 - 3122933 + | regulatory protein SCO2866 3123223 - 3123477 + | hypothetical protein SCO2867 3123679 - 3123906 + | hypothetical protein SCO2868 3123914 - 3124393 + | hypothetical protein SCO2869 3124417 - 3125262 + | regulatory protein SCO2870 3125334 - 3125630 + | hypothetical protein SCO2871 3125634 - 3126614 + | hypothetical protein SCO2872 3126611 - 3127843 + | hypothetical protein SCO2873 3128439 - 3127894 - | hypothetical protein SCO2874 3129590 - 3128619 - | oxidoreductase TERM 874 3128693 - 3128712 + g 72 -13.6 -3.4252 | CGTTGGCGGGCTCGA CGGCGTAC GGGC GTACGCCG TTGTCGTCCATGGGG TERM 875 3129454 - 3129419 - G 74 -18.2 -2.70932 | opp_overlap 3129422 GGCGGGCGGGAACGA GGACCCGGGCCCCGGC GGCC GTCAGGGCCCGGGTGC TTGCGAGGCCGAGCC TERM 876 3129422 - 3129451 + g 77 -18.5 -2.70932 | opp_overlap 3129419 GGGCGGGAACGAGGA CCCGGGCCCCGGC GGCC GTCAGGGCCCGGG TGCTTGCGAGGCCGA SCO2875 3129670 - 3130077 + | MerR family transcriptional regulator SCO2876 3130105 - 3130731 + | acetyltransferase SCO2877 3130825 - 3131211 + | membrane protein SCO2878 3131350 - 3133899 + | hypothetical protein TERM 877 3136167 - 3136119 - g 77 -19.3 -2.78384 | CCGCCCCCGACGACA CCGAGCCCGGCCGCCCCGCCGTC GCC GCCGCCTGGGCGGCCGGGACCCG CCGCGGCCGGGACGG SCO2879 3134618 - 3136273 + | hypothetical protein SCO2880 3136276 - 3136698 + | hypothetical protein SCO2881 3136695 - 3137048 + | hypothetical protein SCO2882 3137116 - 3137664 + | ATP/GTP-binding protein SCO2883 3137661 - 3138893 + | cytochrome P450 SCO2884 3138905 - 3140131 + | cytochrome P450 SCO2885 3140657 - 3140184 - | hypothetical protein SCO2886 3141644 - 3140760 - | hydrolase TERM 878 3141926 - 3141882 - g 71 -11.2 -3.71848 | gap 1, overlap 3141883 CCGCTGGACGAAGAA GCGGCAG-CTCGGCGGGGCCG TGCT CGCCGTCGCCGGGGCCGCCGC CGCCCAGCAGTGGCG SCO2887 3141805 - 3142107 + | membrane protein SCO2888 3142482 - 3142123 - | hypothetical protein SCO2889 3144042 - 3142528 - | sugar transport protein SCO2892 3145726 - 3147090 + | secreted protein SCO2893 3147951 - 3147118 - | hypothetical protein SCO2894 3149049 - 3147985 - | ABC-transport protein, ATP-binding component SCO2895 3149945 - 3149058 - | integral membrane transport protein SCO2896 3150744 - 3149938 - | integral membrane protein SCO2897 3151125 - 3153395 + | secreted penicillin-binding protein SCO2898 3153709 - 3153389 - | molecular chaperone TERM 879 3153845 - 3153818 - R 91 -17.8 -3.62864 | overlap 3153807 CAAAGGCAGGGGAAA GGGGCTGGTGAC CTTG ATCACCAGCCCC TGAAGTCCGACCTGG SCO2899 3154226 - 3153870 - | GroES family molecular chaperone SCO2900 3154582 - 3154250 - | membrane protein SCO2901 3154677 - 3155144 + | hypothetical protein SCO2902 3155892 - 3155290 - | hypothetical protein SCO2903 3156343 - 3155939 - | secreted protein TERM 880 3156031 - 3156065 + g 72 -11.4 -3.65522 | overlap 3156032 3156048 3156055 3156058 CCACCGAGGTGCGGA CGTTGTCGACGGCCTT GCC GAGGTCGTCGACGGCC TTGTTGACGTCGGTG TERM 881 3156392 - 3156435 + r 76 -17.5 -2.82516 | gap 1, overlap 3156396 CGGCCCGTGTGCGGT GCGGCGTCGGGCGTACGGCA AGGTC TGCCGTACGCCCG-TGGTGC TGTACTGCTAGGGAC TERM 882 3156396 - 3156432 + r 78 -18 -2.67515 | overlap 3156392 CCGTGTGCGGTGCGG CGTCGGGCGTACGGCA AGGTC TGCCGTACGCCCGTGG TGCTGTACTGCTAGG rph 3157238 - 3156501 - | ribonuclease PH SCO2905 3157548 - 3157315 - | hypothetical protein SCO2906 3157707 - 3159002 + | PTS transmembrane component TERM 883 3159047 - 3159073 + F 100 -25.2 -3.29144 | GAGTGGTCTCGCGAA GGCCCCCGGACC GTC GGTCCGGGGGCC TTCTCCGCGCGCTCC TERM 884 3159211 - 3159181 - f 70 -12.6 -3.29511 | overlap 3159183 3159194 TTCATCGTGCTACAA CAGGTCTACACCAC TGA GTGGTGTAGACCAC CACCCGATGGAGGAA TERM 885 3159209 - 3159183 - f 86 -19.6 -3.21593 | overlap 3159181 3159194 CATCGTGCTACAACA GGTCTACACCAC TGA GTGGTGTAGACC ACCACCCGATGGAGG SCO2907 3159229 - 3160479 + | PTS transmembrane component TERM 886 3160504 - 3160532 + T 100 -21.8 -4.14243 | opp_overlap 3160504 GTACGGCGTGACGAA GGCCCCGGAACC GCGAA GGTTCCGGGGCC TTTTGCGCTGCCGTG TERM 887 3160532 - 3160504 - T 93 -21.8 -3.14564 | opp_overlap 3160504 GTACGGCGTGACGAA GGCCCCGGAACC GCGAA GGTTCCGGGGCC TTTTGCGCTGCCGTG SCO2908 3161326 - 3160574 - | hypothetical protein SCO2909 3161531 - 3161698 + | hypothetical protein TERM 888 3161733 - 3161695 - T 100 -21.1 -4.07568 | gap 1, overlap 3161696 GCGGGGGCCCGAAAA CTGAAGCGCCCCGCGACG CGTA CGTCGCGGGGCGGTTC-G CCGGGAGGAGCCGTC TERM 889 3161733 - 3161696 - T 93 -21.3 -3.04398 | overlap 3161695 CGGGGGCCCGAAAAC TGAAGCGCCCCGCGACG CGTA CGTCGCGGGGCGGTTCG CCGGGAGGAGCCGTC SCO2910 3162697 - 3161747 - | cysteine synthase SCO2911 3162982 - 3162704 - | hypothetical protein SCO2912 3163225 - 3163082 - | hypothetical protein SCO2913 3163679 - 3163257 - | hypothetical protein TERM 890 3163741 - 3163693 - R 100 -21.1 -3.40522 | overlap 3163698 3163699 ATGCGGCCAGGATAA GCAAACGGGCTCCCCCGTACC GGTGGGT GGTACGGAGGAGCCCACATGC CGGACATCCTGAGCG TERM 891 3163736 - 3163698 - R 100 -20.4 -4.02108 | overlap 3163693 3163699 GCCAGGATAAGCAAA CGGGCTCCCCCGTACC GGTGGGT GGTACGGAGGAGCCCA CATGCCGGACATCCT TERM 892 3163735 - 3163699 - R 93 -21.7 -3.00783 | overlap 3163698 3163693 CCAGGATAAGCAAAC GGGCTCCCCCGTACC GGTGGGT GGTACGGAGGAGCCC ACATGCCGGACATCC SCO2914 3165274 - 3163847 - | amino acid permease TERM 893 3165556 - 3165527 - R 82 -14.3 -3.77206 | opp_overlap 3165527 TAGAAGCGGACGAAA GCCGCACCTCC GGGACAAA GGAGGCGCGGC TTTGACGGGATCGTT SCO2915 3166234 - 3165626 - | hypothetical protein clpS 3166605 - 3166288 - | ATP-dependent Clp protease adaptor protein ClpS SCO2917 3166796 - 3168142 + | nicotinate phosphoribosyltransferase SCO2918 3168248 - 3168835 + | nicotinamidase SCO2919 3169192 - 3168848 - | hypothetical protein TERM 894 3169116 - 3169098 - G 71 -3.7 -4.46212 | opp_overlap 3169103, overlap 3169099 3169102 GCGTGGACGAGAAAA CGCACGC TGCCG GCGCTCG CCGGGGCGGGGCTGG TERM 895 3169316 - 3169274 - R 91 -18.6 -3.67296 | gap 1, opp_overlap 3169277, overlap 3169277 CAGGACGCACCTAAA CACGGATCGGCGGCGACCC GCCAGG GGGTCACCGCCGATC-ATG CTCTGACCTGGGCAG TERM 896 3169277 - 3169314 + r 75 -17 -2.63596 | opp_overlap 3169277 3169274 GACGCACCTAAACAC GGATCGGCGGCGACCC GCCAGG GGGTCACCGCCGATCA TGCTCTGACCTGGGC TERM 897 3169314 - 3169277 - R 82 -19.2 -2.6462 | opp_overlap 3169277, overlap 3169274 GACGCACCTAAACAC GGATCGGCGGCGACCC GCCAGG GGGTCACCGCCGATCA TGCTCTGACCTGGGC SCO2920 3171684 - 3169339 - | secreted protease SCO2921 3172118 - 3172417 + | hypothetical protein SCO2922 3172877 - 3172431 - | hypothetical protein TERM 898 3173003 - 3173032 + r 79 -18.5 -2.8001 | overlap 3172993 3172990 GGGGACCGCCGTAAG GGCCGCCTCCGCC GGGG GGCGGGGGCGGGC TGTCGTAGGGGTTCT SCO2923 3173988 - 3173314 - | hypothetical protein SCO2924 3175140 - 3175568 + | regulator SCO2925 3177048 - 3175582 - | oxidoreductase subunit SCO2926 3177221 - 3178576 + | secreted protein SCO2927 3179765 - 3178620 - | 4-hydroxyphenylpyruvate dioxygenase TERM 899 3179796 - 3179809 + H 71 -6.7 -4.18018 | overlap 3179782 CCTGTTCGCAAGGTG CGCAA TAGT TTGCG TTTTCAGTGGGCAAC SCO2928 3179891 - 3180382 + | transcription regulator AsnC SCO2929 3181553 - 3180504 - | transposase SCO2930 3181757 - 3182404 + | permease membrane component SCO2931 3182412 - 3183686 + | ABC transporter ATP-binding protein SCO2932 3183683 - 3184555 + | permease membrane component SCO2933 3184552 - 3185520 + | permease binding-protein component SCO2934 3186324 - 3185545 - | secreted protein SCO2935 3187042 - 3186380 - | transcriptional regulator SCO2936 3189140 - 3187344 - | hypothetical protein TERM 900 3188411 - 3188436 + g 87 -19.7 -3.14132 | TCATGGGCTCGCCCA GGCGGGCGGCG ATCT CGTCGCCCGCC TTCGTCCGCCAGCGC SCO2937 3190747 - 3189296 - | transmembrane transport protein SCO2938 3191138 - 3192148 + | oxidoreductase SCO2939 3192897 - 3192115 - | hypothetical protein SCO2940 3195312 - 3192991 - | oxidoreductase SCO2941 3197630 - 3195309 - | hypothetical protein SCO2942 3198547 - 3197627 - | oxidoreductase SCO2943 3200400 - 3198763 - | sugar hydrolase SCO2944 3201250 - 3200405 - | sugar transporter membrane protein TERM 901 3200975 - 3200946 - G 72 -12.1 -3.66921 | gap 1, overlap 3200972 AATCGGAACCGGAAA CGCGTCAC-CGCGG TCG CCGCGAGGAACGCG ATCAACGCCGAGGCG SCO2945 3202197 - 3201247 - | sugar transporter membrane protein SCO2946 3203507 - 3202209 - | sugar transporter sugar-binding protein TERM 902 3203691 - 3203656 - R 100 -28.4 -3.18264 | overlap 3203641 GCCCCGACGCACGAA GGCCCCCGGAGTGCGC GCGG GCACACTCCGGGGGCC TTCGGGAAGATCTGA SCO2947 3204044 - 3203751 - | hypothetical protein SCO2948 3204647 - 3204066 - | hypothetical protein SCO2949 3204872 - 3206218 + | UDP-N-acetylglucosamine 1-carboxyvinyltransferase TERM 903 3206276 - 3206235 - T 100 -36.1 -2.98823 | GCTCCCGCAGACACA CCGATGGGGCGGTCACCCG ATCC CGGGTGACCGCCCCATCGG CATTGCGAGGTGCGC SCO2950 3206684 - 3206403 - | DNA-binding protein HU (hs1) SCO2951 3208452 - 3207037 - | malate oxidoreductase TERM 904 3208856 - 3208818 - R 100 -30.4 -2.91274 | opp_overlap 3208824 GCCACTTGAACGAGA GCGGAAGGCCCGCGCCGT CGC ACGGCGCGGGCCTTTCGC ACGTCTGCGGCCGCT TERM 905 3208824 - 3208850 + r 100 -25.2 -3.56643 | opp_overlap 3208818 TGAACGAGAGCGGAA GGCCCGCGCCGT CGC ACGGCGCGGGCC TTTCGCACGTCTGCG SCO2952 3211121 - 3208887 - | helicase protein TERM 906 3210855 - 3210888 + g 75 -13.2 -3.66732 | gap 2 GAGGGCGCCGTCGGC GGGCTC-GACGGC-CG TGTA CGCGCCGTCCGGGCCC TTCTTGCCGTCCTTG TERM 907 3211091 - 3211059 - G 73 -14.8 -3.21099 | opp_overlap 3211060 GTCGTGCATGAGGAA CTCCGCCTCGTGGA TCTTC TCCTCGAGGCGGCG GTACACCCGGTCGAG SCO2953 3212094 - 3211306 - | hypothetical protein SCO2954 3212738 - 3212154 - | RNA polymerase sigma factor SigL SCO2955 3213453 - 3212863 - | hypothetical protein TERM 908 3213719 - 3213758 + G 70 -12.8 -3.42503 | gap 1 CGCCGGTGGAGTACT GGTCGCGGCCA-CGGTCGC CGC GGGACTGATGGCCGGGGCC TTCTACGTCTTCGCC SCO2956 3213669 - 3214232 + | integral-membrane protein SCO2957 3215057 - 3214479 - | hypothetical protein SCO2958 3216312 - 3215125 - | bifunctional uroporphyrinogen-III synthetase/response regulator domain-containing protein SCO2959 3217779 - 3216421 - | nitrate extrusion protein SCO2960 3218859 - 3217912 - | integral membrane protein SCO2961 3220178 - 3218973 - | integral membrane protein SCO2962 3222520 - 3220316 - | bi-functional transferase/deacetylase TERM 909 3220367 - 3220415 + g 70 -14.6 -3.28712 | gap 3, overlap 3220372 CCGCTGGGGCGGCAC GCCGTCGGCGCCGGGCGGCGGCG CGGACA CGCCGCCGCT-G-CGCCG-CAGC TTCTGCCAGCGCAGC TERM 910 3220372 - 3220414 + g 70 -16.2 -2.57132 | gap 1, overlap 3220367 GGGGCGGCACGCCGT CGGCGCCG-GGCGGCGGCG CGGACA CGCCGCCGCTGCGCCGCAG CTTCTGCCAGCGCAG SCO2963 3224004 - 3222520 - | hypothetical protein SCO2964 3225055 - 3224084 - | LysR family transcriptional regulator SCO2965 3225334 - 3226434 + | transport protein TERM 911 3226537 - 3226486 - T 100 -36 -4.58283 | opp_overlap 3226486, overlap 3226487 3226489 3226524 GAAGCCGCGCAAAAA CGACGAGGGCGGCGTGTGCTCGCG CTTA CGCGAGCACACGCCGCCCTCGACC TCGTGGAGATGGCGG TERM 912 3226536 - 3226487 - T 100 -39.5 -3.34488 | opp_overlap 3226486, overlap 3226486 3226489 3226524 AAGCCGCGCAAAAAC GACGAGGGCGGCGTGTGCTCGCG CTTA CGCGAGCACACGCCGCCCTCGAC CTCGTGGAGATGGCG TERM 913 3226534 - 3226489 - T 100 -40.7 -3.23708 | opp_overlap 3226486, overlap 3226487 3226486 3226524 GCCGCGCAAAAACGA CGAGGGCGGCGTGTGCTCGCG CTTA CGCGAGCACACGCCGCCCTCG ACCTCGTGGAGATGG smpB 3227529 - 3227050 - | SsrA-binding protein SCO2967 3228700 - 3227576 - | carboxy-terminal processing protease precursor TERM 914 3228825 - 3228783 - R 73 -14.1 -3.41602 | gap 1, opp_overlap 3228788, overlap 3228784 GTGAGTCTAGGACAA CGCGTGAGGGCCGCACGGTC CCTC GACCGCACGGCCCTCTTG-G TATGTGTCACACCTT TERM 915 3228788 - 3228821 + r 86 -18.1 -3.35197 | opp_overlap 3228783 3228784 TCTAGGACAACGCGT GAGGGCCGCACGGTC CCTC GACCGCACGGCCCTC TTGGTATGTGTCACA SCO2968 3229749 - 3228832 - | cell division protein SCO2969 3230482 - 3229793 - | cell division ATP-binding protein SCO2970 3230696 - 3230890 + | hypothetical protein TERM 916 3230968 - 3231003 + T 77 -14.6 -3.43961 | opp_overlap 3230964 GTGGCGGAAGACGCG GGAGGGGCCCGGAGCG ATGT CGCTCCGGGCAAATCC TTCTGCCTGTTCTGC SCO2971 3231839 - 3231048 - | secreted protein TERM 917 3231269 - 3231318 + g 72 -11.9 -3.57561 | overlap 3231271 GAGCGACGTTGTCGT TGCCGCCGCCGTCGGGGGTGGTG TTGT CGCCGCCACCGGTGCCGCCGGTG TTTCCACCGTTGCCG TERM 918 3231271 - 3231316 + g 72 -14.5 -3.36569 | overlap 3231269 GCGACGTTGTCGTTG CCGCCGCCGTCGGGGGTGGTG TTGT CGCCGCCACCGGTGCCGCCGG TGTTTCCACCGTTGC TERM 919 3232104 - 3232134 + r 86 -18.3 -3.28712 | opp_overlap 3232104 GGAAGGCAGAGAAAA GGCAACCGCCGCC GGAGG GGCGGCAGTTGCC TTGTCGACAAAGCGG TERM 920 3232134 - 3232104 - R 100 -20.5 -4.57474 | opp_overlap 3232104 GGAAGGCAGAGAAAA GGCAACCGCCGCC GGAGG GGCGGCAGTTGCC TTGTCGACAAAGCGG prfB 3233271 - 3232165 - | peptide chain release factor 2 SCO2973 3234602 - 3233349 - | serine/threonine protein kinase SCO2974 3236339 - 3234708 - | serine/threonine protein kinase SCO2975 3236737 - 3240774 + | hypothetical protein SCO2976 3241444 - 3240815 - | hypothetical protein TERM 921 3241498 - 3241508 + H 71 -8.2 -4.07568 | overlap 3241487 TGATGCGGCCGACCC CGCG GCG CGCG TTTTGCCGACGGCCG SCO2977 3241532 - 3242731 + | hypothetical protein SCO2978 3242925 - 3244322 + | secreted protein SCO2979 3244399 - 3245682 + | integral membrane transport protein SCO2980 3245679 - 3246596 + | integral membrane transport protein TERM 922 3246655 - 3246609 - f 100 -24.4 -3.29461 | overlap 3246597 3246611 TAACCGCCGCGACAA CACCCTTGAGGGGGCGGGCCGG TCA CCGGCCCGCCCCCTCATCCGTA CGGGCACAACGTCCC TERM 923 3246653 - 3246611 - f 100 -24.8 -3.21395 | overlap 3246597 3246609 ACCGCCGCGACAACA CCCTTGAGGGGGCGGGCCGG TCA CCGGCCCGCCCCCTCATCCG TACGGGCACAACGTC SCO2981 3246749 - 3249046 + | glycosyl transferase SCO2982 3249066 - 3251276 + | glycosyl transferase SCO2983 3251284 - 3253521 + | glycosyl transferase SCO2984 3253518 - 3254849 + | integral membrane protein SCO2985 3254989 - 3256542 + | integral membrane protein SCO2986 3256977 - 3256564 - | hypothetical protein SCO2987 3257116 - 3257622 + | regulatory protein SCO2988 3257700 - 3258680 + | UDP-glucose 4-epimerase SCO2989 3259130 - 3258693 - | integral membrane protein SCO2990 3259738 - 3259127 - | hypothetical protein SCO2991 3260538 - 3259735 - | hypothetical protein SCO2992 3261048 - 3260554 - | acetyltransferase SCO2993 3261047 - 3261601 + | hypothetical protein SCO2994 3262339 - 3261649 - | TetR family transcriptional regulator TERM 924 3262208 - 3262262 + g 73 -15.5 -3.23216 | gap 1 CTCGCGGAGCACCGC CGCC-CCGGCGGGGGCCCGGCGGCGC GGGC GCGGCGTCGGCTCGTCGGCGGCGGCG TTGGTCGTCATGCGG SCO2995 3262446 - 3263402 + | ABC transporter integral membrane protein SCO2996 3263440 - 3264306 + | ABC transporter ATP-binding protein SCO2997 3264435 - 3266675 + | transferase SCO2998 3266672 - 3268393 + | transferase TERM 925 3268576 - 3268545 - T 100 -26.6 -3.64703 | CGGGCGCGACGCAAA GGCGCCCCGGACCG AACC CGGCCCGGGGCGCC TCACACGGCAACGAC SCO2999 3273572 - 3268611 - | hypothetical protein TERM 926 3268714 - 3268677 - G 71 -9.8 -3.88498 | gap 1, opp_overlap 3268681 GTTGGACAGATCAAA CGCGTCCGACTGCCGGA TCTCC TCCAGC-GTCGTCCGCG CCCGCCCGAGAATCG SCO3000 3274746 - 3274075 - | phosphatase TERM 927 3274654 - 3274684 + g 70 -13.2 -3.40403 | overlap 3274645 CCCCAGCTCGGCGAA CGCCGCGTTCGTCG CCC CGATGATCGCGTCG TTGTCGTGGAACAGC SCO3001 3275308 - 3274805 - | hypothetical protein SCO3002 3275574 - 3275287 - | hypothetical protein SCO3003 3275946 - 3275599 - | hypothetical protein SCO3004 3276479 - 3276748 + | hypothetical protein TERM 928 3276849 - 3276808 - T 90 -21.7 -2.78596 | gap 1 TACGCCGCCAGGACA GGC-CGAAGGGCCGGTCACC CCG GGTGACCGGCCCTTCCCACC GCCACGGCGCCCACG SCO3005 3279720 - 3276877 - | preprotein translocase subunit SecA SCO3006 3280002 - 3280577 + | acetyltransferase SCO3007 3280662 - 3281837 + | hypothetical protein SCO3008 3282630 - 3281872 - | two-component system response regulator SCO3009 3283623 - 3282859 - | hypothetical protein SCO3010 3284812 - 3283865 - | hypothetical protein SCO3011 3286832 - 3284985 - | lipoprotein LpqB SCO3012 3288888 - 3286822 - | two-component system histidine kinase SCO3013 3289579 - 3288890 - | two-component system response regulator SCO3014 3290726 - 3289584 - | translation initiation factor TERM 929 3291295 - 3291323 + G 85 -18.1 -3.55444 | CCCGCTCCGCCCGCT CGGCGTCGGCGAG ATC CTCGACGGCGCCG TTTCCACCATGCGCA SCO3015 3290867 - 3292255 + | integral membrane protein SCO3016 3292317 - 3293012 + | integral membrane protein SCO3017 3293063 - 3294226 + | secreted protein SCO3018 3294226 - 3295215 + | regulatory protein SCO3019 3295215 - 3296525 + | lipoprotein TERM 930 3296552 - 3296531 - T 100 -18.7 -4.96848 | opp_overlap 3296528 GCGCCTATAGAAAAA GGCGGGGCC TTGT GGCCCCGCC CGGTTCACTCCCGTT TERM 931 3296620 - 3296587 - T 88 -21.1 -2.53015 | opp_overlap 3296582 3296579, overlap 3296592 AGATCCCTGAACGCA GAAAACCCCGCACCG TTCC CGGTGCGGGGTCTCC CAGCAATAATTGTTC TERM 932 3296615 - 3296592 - T 100 -19.6 -4.4715 | opp_overlap 3296582 3296579, overlap 3296587 CCTGAACGCAGAAAA CCCCGCACCG TTCC CGGTGCGGGG TCTCCCAGCAATAAT TERM 933 3296770 - 3296790 + T 70 -9.7 -3.79909 | opp_overlap 3296767 3296760 TGAAACACTCAACCG CACCATGTG TGG CACATGGGG TTGTTCGTGGTTTCA TERM 934 3297281 - 3297297 + T 70 -2.9 -4.4715 | overlap 3297283 GGGGAAGATCAGCCT GTTATCC CCG GGGTACC TTTTATCCGTTGAGC TERM 935 3297943 - 3297954 + T 74 -2.2 -4.7254 | CGCCTTACGGCTTCG CACG GACC TGTG TTTTTAGTAAACAGT SCO3020 3303326 - 3302319 - | integral membrane protein SCO3021 3303453 - 3304409 + | integral membrane protein SCO3022 3305044 - 3304430 - | hypothetical protein SCO3023 3306612 - 3305155 - | S-adenosyl-L-homocysteine hydrolase SCO3024 3307866 - 3306886 - | transport protein SCO3025 3309132 - 3307981 - | mannose-6-phosphate isomerase SCO3026 3310310 - 3309183 - | hypothetical protein SCO3027 3310568 - 3310398 - | hypothetical protein manB 3312184 - 3310820 - | phosphomannomutase/phosphoglucomutase SCO3029 3313892 - 3312276 - | L-lactate permease SCO3030 3314464 - 3314042 - | hypothetical protein TERM 936 3314096 - 3314137 + g 74 -16.6 -3.14132 | GCGCGCGACCTCCAT CGGGTCGGCCGA-GCGTGCG CCAC CGCGGGCCTCGGCCG-CCCG TTCCTGAGGCCGGGC SCO3031 3314858 - 3315211 + | hypothetical protein SCO3032 3316761 - 3315241 - | secreted protein SCO3033 3320564 - 3316758 - | integral membrane regulatory protein SCO3034 3321016 - 3320753 - | sporulation regulatory protein TERM 937 3321271 - 3321214 - H 85 -17.6 -3.44529 | overlap 3321211 3321259 CGACATACCAATGAA GTCCGCCGGGACGCCCGTCCCGATTC GCACCG GCACCAGGAAGGACGCCCCGGCGATC GATCCCGTTCCGATA SCO3035 3321701 - 3322195 + | hypothetical protein SCO3036 3322266 - 3323225 + | LPPG:FO 2-phospho-L-lactate transferase SCO3037 3323222 - 3324553 + | F420-0--gamma-glutamyl ligase SCO3038 3324630 - 3325610 + | hypothetical protein SCO3039 3326855 - 3325773 - | nucleotide phosphorylase SCO3040 3328209 - 3326959 - | secreted protein SCO3041 3328322 - 3329113 + | hypothetical protein SCO3042 3329406 - 3330596 + | transcriptional regulator SCO3043 3331178 - 3332596 + | hypothetical protein SCO3044 3332956 - 3334479 + | hypothetical protein SCO3045 3334869 - 3336392 + | secreted protein TERM 938 3336639 - 3336587 - f 93 -21.2 -3.27298 | gap 1, overlap 3336563 3336562 3336588 GGCGCCAAGGACGAA CCCGAAGGCGCCGCCCTCGGCGCCG AAGG CGGCACCGGGGACGGCACCG-CAGG CGAGCCCGACGCCCC TERM 939 3336639 - 3336588 - f 88 -21.4 -2.56164 | overlap 3336563 3336562 3336587 GCGCCAAGGACGAAC CCGAAGGCGCCGCCCTCGGCGCCG AAGG CGGCACCGGGGACGGCACCGCAGG CGAGCCCGACGCCCC SCO3046 3336677 - 3338146 + | hypothetical protein SCO3047 3338276 - 3339850 + | hypothetical protein SCO3048 3341075 - 3339882 - | hypothetical protein TERM 940 3341275 - 3341251 - H 70 -2.7 -4.55118 | overlap 3341221 GAACCCGACACAAAA TCACGCCCGTG TGG CCCCGGCATAA GGTGGAGGCCATGAC SCO3049 3341259 - 3341852 + | acyl-CoA hydrolase SCO3050 3342928 - 3341888 - | hypothetical protein SCO3051 3344227 - 3343070 - | acyl-CoA dehydrogenase SCO3052 3344420 - 3345763 + | UDP-glucose 6-dehydrogenase SCO3053 3347939 - 3345819 - | secreted esterase TERM 941 3348246 - 3348300 + r 100 -27.2 -3.29511 | overlap 3348247 CCGGCGGGCCGGCGG GCCGGACGACGCCGGTTCGGCCGA GGCTCAG TCGGCCGAACCGGCGTCGACCGCA TTGTGCCCCAGTGCG TERM 942 3348247 - 3348299 + r 100 -30.7 -2.57564 | overlap 3348246 CGGCGGGCCGGCGGG CCGGACGACGCCGGTTCGGCCGA GGCTCAG TCGGCCGAACCGGCGTCGACCGC ATTGTGCCCCAGTGC SCO3054 3348852 - 3348346 - | hypothetical protein SCO3055 3348964 - 3349323 + | hypothetical protein SCO3056 3349353 - 3349745 + | hypothetical protein SCO3057 3350888 - 3349758 - | dipeptidase SCO3058 3352210 - 3351008 - | dipeptidase SCO3059 3352767 - 3352225 - | phosphoribosylaminoimidazole carboxylase catalytic subunit PurE SCO3060 3353999 - 3352764 - | phosphoribosylaminoimidazole carboxylase ATPase subunit TERM 943 3354542 - 3354590 + G 74 -16.7 -3.14132 | gap 1 GTCGTACCGCAGCTG GGTCTTC-CGCGCGCTGCCCGC CCGTGA GCCGGCGGCGCGGGCGGAGACC TTCCTGGAGCACGAG SCO3061 3354084 - 3354656 + | integral membrane protein SCO3062 3355955 - 3354681 - | two-component system histidine kinase SCO3063 3356667 - 3355990 - | two-component system reponse regulator TERM 944 3356893 - 3356926 + H 75 -6 -4.52589 | gap 1, overlap 3356894 CCTGTAGCACCCAGC G-GACCTTTGGCGAC AGTTC GACGCTGAAGGTCTC TTTTGTGTGCGGGCC TERM 945 3356894 - 3356924 + H 73 -9.7 -3.87627 | overlap 3356893 CTGTAGCACCCAGCG GACCTTTGGCGAC AGTTC GACGCTGAAGGTC TCTTTTGTGTGCGGG SCO3064 3357162 - 3358658 + | peptide transporter SCO3065 3358788 - 3359225 + | hypothetical protein SCO3066 3359867 - 3359355 - | regulator of Sig15 TERM 946 3360025 - 3359995 - R 79 -12.5 -3.73224 | gap 1, overlap 3360013 GTATTGCGCACGAAA CCCGGCGCGGGGCG AAAA CAC-CCGCTCCGGG AAGCACACGCACCCC SCO3067 3360441 - 3360064 - | anti anti sigma factor SCO3068 3360694 - 3361608 + | RNA polymerase sigma factor SCO3069 3362029 - 3361685 - | integral membrane protein SCO3070 3363212 - 3362037 - | chlorohydrolase SCO3071 3364618 - 3363269 - | N-formimino-L-glutamate deiminase SCO3072 3365832 - 3364615 - | allantoate amidohydrolase SCO3073 3367547 - 3365829 - | urocanate hydratase TERM 947 3367692 - 3367657 - R 100 -33.4 -3.53012 | CGTGCCGCCCGCAAA CGAGCGCGGGGCCCCC GGTC GGGGGCCCCGCGCTCG GACTGCCGGACGTCG SCO3074 3368334 - 3367747 - | integral membrane protein SCO3075 3369364 - 3368495 - | transcriptional regulator TERM 948 3368945 - 3368903 - G 71 -13.3 -3.47227 | gap 1 GGCGAAGTAGGAGAA GCCGTGTGCCTGGGCGGCGG CGGC CCGCAGTCCGAGCAC-CGGC AGCGGCCGGCTCGCG SCO3076 3369483 - 3369953 + | integral membrane protein TERM 949 3369979 - 3369961 - T 73 -13.8 -3.33792 | overlap 3369959 AGGACTGAGAGAAGA CGCCCGGC AGG GCCGGACG GAGCGGGGGAAGACT SCO3077 3371744 - 3370359 - | cystathionine beta-synthase TERM 950 3371517 - 3371572 + g 70 -13.8 -3.21395 | gap 1, overlap 3371517 GATGGCGAGGCCGAC GCCG-GTGTTGCCGCTGGTCGGCTCGA CGA TCGTGCCGCCCGGCTGCAGCTCACCGC TCTTCTCCGCGGCCT SCO3078 3371912 - 3372934 + | secreted protein TERM 951 3372979 - 3372958 - f 72 -13 -3.57144 | CGGTCCAGGCCGAAA GGGGGCTG GGGGCA CAGCCCCC GAGCACGCCCGCCGC SCO3079 3373160 - 3374380 + | acetyl-CoA acetyltransferase TERM 952 3374441 - 3374477 + F 95 -14.5 -4.36914 | CCCAGTGTGACGACT CGGCCCGGAACCC CCTTCACCCCA GGGTTCTGGGCCG TTTTGTGACCCAAAC SCO3080 3374675 - 3375484 + | secreted protein SCO3081 3375828 - 3375535 - | hypothetical protein TERM 953 3375588 - 3375619 + g 81 -20.2 -2.62184 | CTGCCGCTTCCTCCA CCTGGCCCTCGTCC TCCA GGACGAGGGCCAAG TCGTGTGCGGCGACG SCO3082 3375950 - 3376180 + | hypothetical protein TERM 954 3376233 - 3376207 - T 93 -22.3 -3.23692 | GACCACGACGACGAA GGGCCCCGGGC ACGAA GCCCGGGGCCC TTCACCTGCTGGGTG SCO3083 3377175 - 3376252 - | integral membrane protein SCO3084 3378513 - 3377344 - | 4-hydroxybenzoate 3-monooxygenase SCO3085 3379088 - 3378735 - | hypothetical protein SCO3086 3379423 - 3380202 + | lipoprotein TERM 955 3381005 - 3381055 + T 70 -4.5 -4.43307 | gap 1, overlap 3381030 3381032 CGCTTCGCGCGCCTT GACCCTATCGGGACGCTCCTCCCG GCCT CGGGCGGGACGGCC-GATGTTGTC TTATTTTATTGGCGC SCO3088 3381339 - 3381094 - | hypothetical protein SCO3089 3381453 - 3382223 + | ABC transporter ATP-binding protein SCO3090 3382330 - 3384861 + | ABC transporter integral membrane protein TERM 956 3384886 - 3384915 + T 100 -24.3 -3.59979 | GACGCGACGCACCGA GGGCCGGGCTCCC GCAC GGGGGCCCGGCCC TTTCGGGTCGGCGCG SCO3091 3386249 - 3384933 - | cyclopropane-fatty-acyl-phospholipid synthase SCO3092 3387853 - 3386513 - | oxidoreductase SCO3093 3389320 - 3388379 - | hydrolase SCO3094 3389877 - 3389317 - | hypothetical protein SCO3095 3390487 - 3389963 - | hypothetical protein eno 3391821 - 3390541 - | phosphopyruvate hydratase TERM 957 3391735 - 3391713 - G 71 -14.8 -3.05463 | opp_overlap 3391731 AGGCGCCGGACGGAA CGGCGGCACG ACC CGTGCTGCCG TCGTCGAGGCCGACC TERM 958 3392028 - 3392006 - R 80 -9.8 -4.2528 | overlap 3392021 3392022 TCCGAACGGAACAAA GGCGGAACAT GAA AAGTCCCGCC CCGGTGCGTACGGGG TERM 959 3392064 - 3392021 - R 100 -22.5 -4.4261 | opp_overlap 3392055, overlap 3392006 3392022 GGCGGAACATGAAAA GTCCCGCCCCGGTGCGTAC GGGGGA ACACGCACCGGGGCGGGAG TCACGGGACCGCCGC TERM 960 3392063 - 3392022 - R 100 -26 -3.25084 | opp_overlap 3392055, overlap 3392006 3392021 GCGGAACATGAAAAG TCCCGCCCCGGTGCGTAC GGGGGA ACACGCACCGGGGCGGGA GTCACGGGACCGCCG SCO3097 3392817 - 3392083 - | secreted protein SCO3098 3394196 - 3393171 - | secreted protein SCO3099 3395641 - 3394340 - | cytochrome P450 hydroxylase SCO3100 3396615 - 3395638 - | nucleoside triphosphate pyrophosphohydrolase TERM 961 3395837 - 3395890 + g 71 -15.4 -3.14132 | gap 3, overlap 3395849 GCGAGGGCCAGGCCG GGCTGGCCGAGGGGGA-CGC-CCTCGG TGA CCGAGGTGCGCTGCTTCTCGGC-GGCC TTGGTGCGCAGCCAG SCO3101 3397339 - 3396692 - | lipoprotein SCO3102 3398953 - 3397490 - | protein kinase SCO3103 3399624 - 3399019 - | integral membrane protein SCO3104 3401802 - 3399763 - | hypothetical protein SCO3105 3401899 - 3402504 + | hypothetical protein SCO3106 3402554 - 3403453 + | lipoprotein SCO3107 3404297 - 3403521 - | lipoprotein SCO3108 3404444 - 3404641 + | hypothetical protein TERM 962 3404710 - 3404663 - T 93 -22.8 -3.05384 | opp_overlap 3404672, overlap 3404665 CTCCCCCGTACCGAA CACGTCGAAGCCGTCCACGGAA CTGT CCCCGTGGACGGCTTTGCCGTG AGCCGGCCCGGGCTC TERM 963 3404708 - 3404665 - T 85 -19.6 -3.08679 | opp_overlap 3404672, overlap 3404663 CCCCCGTACCGAACA CGTCGAAGCCGTCCACGGAA CTGT CCCCGTGGACGGCTTTGCCG TGAGCCGGCCCGGGC TERM 964 3404672 - 3404701 + T 87 -16.5 -3.59979 | opp_overlap 3404665 3404663 ACCGAACACGTCGAA GCCGTCCACGG AACTGTCC CCGTGGACGGC TTTGCCGTGAGCCGG SCO3109 3408313 - 3404759 - | transcriptional-repair coupling factor TERM 965 3408907 - 3408867 - R 100 -23.9 -4.13767 | opp_overlap 3408906 TCGCGCAGCGGAAAA GGCCCGGCGTCTTCGTCCC CGT GGGACGTCGGCGCCGGGCC CTCCTCCGCAACCCC SCO3110 3411514 - 3408950 - | ABC transport system integral membrane protein SCO3111 3412299 - 3411511 - | ABC transport system ATP-binding protein TERM 966 3412413 - 3412437 + r 80 -9.9 -4.25104 | overlap 3412411 CCGGAACCGGGGGCC GGCCGCGCTGG TGT TCAGCGCAGTC TTTTACTGAGGAAAA SCO3112 3413129 - 3413025 - | hypothetical protein SCO3113 3413130 - 3413195 + | hypothetical protein SCO3114 3414700 - 3413804 - | hypothetical protein TERM 967 3414873 - 3414832 - R 100 -34.6 -4.54449 | overlap 3414820 ACACCGCACACAAAA GGGCGGGGCCCGGTCGAC TCGCAG GTCGACCGGGCCCCGCCC GTCGGGTACGTCAGC SCO3115 3417570 - 3414901 - | hypothetical protein TERM 968 3416165 - 3416112 - G 93 -24.4 -2.53876 | CGGGACCGGAAGGCA CGCCCGGCGCACCCGGAGCACCCG GAGCGG CGGGCGCACCGGGAGGCCCGGGCG GGCCAGGGGGGTTGG SCO3116 3418585 - 3417578 - | hypothetical protein SCO3117 3418879 - 3419409 + | hypothetical protein SCO3118 3419502 - 3419999 + | hypothetical protein SCO3119 3421340 - 3420021 - | hypothetical protein TERM 969 3421353 - 3421369 + r 74 -9.3 -4.15854 | overlap 3421354 CATGCCTCCAGCCTA CGGGCGC CGG GCGCCCC TTTTCCGGTGACTTT SCO3120 3422058 - 3421849 - | hypothetical protein TERM 970 3422030 - 3421972 - G 70 -16 -2.66692 | gap 1, overlap 3421950 3421971 CAGCATGACGAGAAC GCCGATGCGGCAGGCGCGGAGGAGTTC TGGGCC GAACTCGTCCGCGCCGATCGCAGC-GC CTTCAACAAGACGAC TERM 971 3422101 - 3422082 - g 72 -11.4 -3.61715 | GACGGTGCGCAAGAA CGCAGGAG ACTC CTCCCGCG GATGCCTCGCGATCA SCO3121 3422071 - 3422199 + | hypothetical protein TERM 972 3422305 - 3422338 + F 71 -16 -2.62184 | GATGGGGGAGCTCTT GTTCGGGCCCTGAC ATGACC GTCGGGGCCCGCAC TCATGTCCCCCACAA SCO3122 3422409 - 3423857 + | nucleotidyltransferase SCO3123 3423989 - 3424963 + | ribose-phosphate pyrophosphokinase SCO3124 3425176 - 3425772 + | 50S ribosomal protein L25/general stress protein Ctc TERM 973 3425792 - 3425833 + F 85 -18.8 -2.98942 | gap 1, overlap 3425793 CCCCGACGGTCATCG TGTGGTCGGCCGCTGTTCC CGTGC GGGGCAGCGGCCGACC-CG TATGTGTGGACGGGT SCO3125 3425878 - 3426480 + | peptidyl-tRNA hydrolase SCO3126 3426533 - 3427051 + | hypothetical protein SCO3127 3429867 - 3427132 - | phosphoenolpyruvate carboxylase SCO3128 3430174 - 3431184 + | fatty acid desaturase (membrane) SCO3129 3431181 - 3431858 + | TetR family transcriptional regulator SCO3130 3431891 - 3433066 + | dehydratase SCO3131 3433456 - 3433079 - | hypothetical protein SCO3132 3434364 - 3433453 - | trans-aconitate methyltransferase SCO3133 3434529 - 3435026 + | MarR family regulatory protein SCO3134 3435941 - 3434985 - | two-component system response regulator TERM 974 3435801 - 3435769 - G 71 -9.7 -3.86106 | opp_overlap 3435797, overlap 3435770 ATACGAACCACGAAA CCCCCTCCCCCGAGC TCC GCCAGGAGCAGGGGA TACCCATCGTCTGTC TERM 975 3435838 - 3435873 + g 73 -16.2 -3.02144 | gap 1, overlap 3435838 CGGACGACGGCACCG GCACGGGTGGACGCCGG GGC CCG-CGTCCAGCTGTGC TGTTCCCGGGCGTCG SCO3135 3436004 - 3436459 + | acetyltransferase SCO3136 3437626 - 3436463 - | galactokinase SCO3137 3438627 - 3437662 - | UDP-glucose 4-epimerase SCO3138 3439685 - 3438624 - | galactose-1-phosphate uridylyltransferase TERM 976 3438798 - 3438755 - G 73 -6.2 -4.2349 | gap 3 GGCGGATAGTGAAAA GTTCCAGG-TG-GA-GCGCGA AGTCG TCGCGCGTCACACCCTCGAAC TCCTCCAGCTGCCCG SCO3139 3439885 - 3441573 + | sodium:solute symporter SCO3140 3441595 - 3441891 + | hypothetical protein SCO3141 3441921 - 3442073 + | hypothetical protein SCO3142 3442013 - 3442183 + | hypothetical protein SCO3143 3442183 - 3442347 + | hypothetical protein SCO3144 3442976 - 3442302 - | two-component system response regulator SCO3145 3444689 - 3443196 - | secreted protein SCO3146 3446582 - 3445110 - | secreted protein TERM 977 3446247 - 3446280 + g 70 -14.5 -3.28712 | gap 1, overlap 3446250 CCACATGCCGTCGGC GTCGGCGCCGGA-GCC GGG GGCGTCCGGCGCCTCC TTGTACCAGAGCACC TERM 978 3446250 - 3446277 + g 79 -19.2 -2.82623 | gap 1, overlap 3446247 CATGCCGTCGGCGTC GGCGCCGGA-GCC GGG GGCGTCCGGCGCC TCCTTGTACCAGAGC TERM 979 3447062 - 3447115 + r 71 -15.2 -3.07192 | overlap 3447103 CACCCGCCGCCAACC GGCCAC-CGGGCCGCGTCCGCCCCTG TTCC CAAGGGAGGAC-CGGCCCGTGATGCC TCTGTTACGCGCCTT SCO3147 3448989 - 3447175 - | ABC transporter ATP-binding subunit SCO3148 3449946 - 3449047 - | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase ksgA 3450821 - 3449961 - | dimethyladenosine transferase SCO3150 3452228 - 3450852 - | hypothetical protein SCO3151 3453206 - 3452316 - | hypothetical protein SCO3152 3453684 - 3453247 - | hypothetical protein SCO3153 3454701 - 3453841 - | hypothetical protein SCO3154 3454768 - 3456543 + | integral membrane protein SCO3155 3456597 - 3457136 + | hypothetical protein SCO3156 3457367 - 3458992 + | penicillin-binding protein (secreted protein) SCO3158 3461177 - 3460797 - | hypothetical protein SCO3157 3459077 - 3460852 + | penicillin-binding protein (secreted protein) SCO3159 3461363 - 3462424 + | hypothetical protein SCO3160 3462426 - 3463187 + | integral membrane transport protein SCO3161 3463196 - 3463978 + | ABC transport protein, ATP-binding subunit SCO3162 3463996 - 3465258 + | esterase SCO3163 3465592 - 3465317 - | hypothetical protein SCO3164 3466527 - 3465682 - | integral membrane protein SCO3165 3467063 - 3466524 - | hypothetical protein TERM 980 3467180 - 3467140 - R 73 -15.4 -3.18264 | gap 1, opp_overlap 3467137 3467136 3467132 3467140 CCCGGGACGGAGGAA GCCGGTGAGGGCAGCCCCG TCCC CACGGA-GCCCTCACCGGC TGGTCTGTTGTCGTC SCO3166 3469459 - 3467222 - | membrane transport protein SCO3167 3470205 - 3469606 - | TetR family transcriptional regulator SCO3168 3470354 - 3473869 + | protease TERM 981 3473936 - 3473903 - T 90 -17.4 -3.59979 | gap 1 CGGTGGCACGGGAAA GGGCGCCCAC-CCGG ATCGA CCGGGGAGGGCGCCC TCTCACCTCAGCGGC SCO3169 3474185 - 3473958 - | hypothetical protein SCO3170 3475167 - 3474274 - | short chain dehydrogenase SCO3171 3476108 - 3475164 - | hydrolase SCO3172 3477664 - 3476105 - | monooxygenase SCO3173 3477824 - 3478471 + | merR family transcriptional regulator SCO3174 3479314 - 3478490 - | exodeoxyribonuclease (secreted protein) TERM 982 3478760 - 3478778 + g 71 -7.4 -4.09963 | overlap 3478769 GAGCCACTCCCGCTC CTCCGG CAGGAAC CCGGAG TTCTTCTTGTTGGCG TERM 983 3479064 - 3479046 - G 72 -11.7 -3.59979 | TCCGTCGAGCCGAAA CCGACGC GGACG GCGTCGG GCTCACGGCGCGTGT SCO3175 3479362 - 3479847 + | acetyltransferase SCO3176 3481618 - 3479867 - | hypothetical protein TERM 984 3480664 - 3480690 + g 80 -3.5 -4.65916 | CGTGGCCGCTCTCGA CCGGCTCGAGG GTGAG CGTCCTGCCGG TTTTCTTCCGGTGCC TERM 985 3481669 - 3481651 - R 73 -11 -3.84406 | CCCGGACGACAAGAA GGTGCCAC TGC GTGACACC GCGCACAGGTGACCC TERM 986 3481828 - 3481788 - R 100 -30 -2.70932 | opp_overlap 3481792, overlap 3481792 TGGGCCGGGGAACGA CGAAGGTCCCGTCCGATC GTGAT GATCGGACGGGACCTTCG TCAATGTGCGTGGAC TERM 987 3481792 - 3481824 + r 100 -24.3 -3.2056 | opp_overlap 3481788 3481792 CCGGGGAACGACGAA GGTCCCGTCCGATCG TGA TGATCGGACGGGACC TTCGTCAATGTGCGT TERM 988 3481824 - 3481792 - R 100 -23.6 -3.27298 | opp_overlap 3481792, overlap 3481788 CCGGGGAACGACGAA GGTCCCGTCCGATC GTGAT GATCGGACGGGACC TTCGTCAATGTGCGT SCO3177 3483236 - 3481968 - | hypothetical protein TERM 989 3482871 - 3482908 + g 71 -13.3 -3.53811 | GGACTGTCCGGGTCT CGGCCCGTCCTCGGG GCCGCCCG CCCGCGGGCGCGCCG TTTCGGGCCGCTCCG SCO3179 3484608 - 3484069 - | molybdenum cofactor biosynthesis protein (putative secreted protein) moaC 3485117 - 3484605 - | molybdenum cofactor biosynthesis protein C SCO3181 3486478 - 3485204 - | molybdopterin biosynthesis protein SCO3182 3487461 - 3486550 - | UTP-glucose-1-phosphate uridylyltransferase SCO3183 3487555 - 3488169 + | hypothetical protein TERM 990 3488226 - 3488201 - T 93 -20.5 -3.57144 | opp_overlap 3488201 TGCCGGACGGCGAAA CGGCCTCCACG CGTG CGTGGAGGCCG TTTCGCCGTCCGTCG TERM 991 3488201 - 3488226 + T 93 -20.5 -3.57792 | opp_overlap 3488201 TGCCGGACGGCGAAA CGGCCTCCACG CGTG CGTGGAGGCCG TTTCGCCGTCCGTCG SCO3184 3491068 - 3488258 - | penicillin acylase TERM 992 3491726 - 3491671 - g 75 -13.1 -3.63895 | gap 2, overlap 3491664 TGGAAGGAGGCGAAA CCGGCGCTC-CCG-GCCGCCTCCGCGC TGGC GCTGGGCGGCGTCGCGGTGAGCGTCGG CGTGACCGCGGCGGG SCO3185 3491383 - 3492930 + | potassium/proton antiporter TERM 993 3494288 - 3494308 + G 71 -10.3 -3.78953 | CGGACAGCTGGAGGA CCGGTTCCG GGA CGGCGCCGG TTTCCTGGTGCCGAT SCO3186 3493179 - 3494444 + | ABC transporter integral membrane protein SCO3187 3494512 - 3494844 + | hypothetical protein SCO3188 3494975 - 3495817 + | 5'-methylthioadenosine phosphorylase SCO3189 3496079 - 3496558 + | hypothetical protein SCO3190 3496670 - 3497140 + | mechanosensitive channel SCO3191 3497357 - 3497181 - | hypothetical protein SCO3192 3497381 - 3498703 + | integral membrane protein TERM 994 3499186 - 3499228 + G 74 -14 -3.53012 | CCCACGTGGTGCCGG TGGTGCCCGCGGCCTGCGTC TTC GACCTGGGCCGCGGGGGCGA TTTCCGGGCCAGGCC SCO3193 3498864 - 3499910 + | hypothetical protein TERM 995 3499910 - 3499961 + F 73 -7.1 -4.4009 | gap 1, overlap 3499912 3499919 3499926 TGGCCGGGAGGTCTG AACGGGCCGTCGCCG-ACGGCCGG TTGAC CCGGCCGTGTTGCGATTGTCCGGG TTTTGTCACGTGCCG SCO3194 3500071 - 3501294 + | lipoprotein TERM 996 3501324 - 3501361 + F 75 -14.1 -3.445 | gap 1, overlap 3501325 3501325 GGGTATTTTGACGGT TCGTCGGGCCGCGCGGAA ACT TTTCGCGCGGCCCT-CGC GTTTTTCGTGCGTAC TERM 997 3501325 - 3501362 + F 100 -16.3 -4.7497 | gap 1, overlap 3501325 3501324 GGTATTTTGACGGTT CGT-CGGGCCGCGCGGAA ACT TTTCGCGCGGCCCTCGCG TTTTTCGTGCGTACG TERM 998 3501325 - 3501360 + F 75 -17.6 -2.66218 | gap 1, overlap 3501324 3501325 GGTATTTTGACGGTT CGTCGGGCCGCGCGGAA ACT TTTCGCGCGGCCCT-CG CGTTTTTCGTGCGTA SCO3195 3501532 - 3502212 + | hypothetical protein SCO3196 3504346 - 3502247 - | fructose-specific permease TERM 999 3503781 - 3503838 + g 79 -19.1 -2.81642 | gap 2, overlap 3503803 3503809 3503833 CCGGAATCCTCACCG GTGCTG-C-CCGGGGCGGCCTCGGCGG AGGCCG CCGCCGAGACCGCCCCGGTGTCCGCGG TCTCCTCGGTGGTGT SCO3197 3505421 - 3504474 - | 1-phosphofructokinase SCO3198 3506179 - 3505418 - | DeoR family transcriptional regulator TERM 1000 3506310 - 3506345 + r 100 -24.8 -3.37056 | opp_overlap 3506311, overlap 3506311 CATCAGGCATGAGGA AGGGCGGATCCGGCAC CCCC GTGCCGGATCCGCCCC TTGTCCATCCGTCCT TERM 1001 3506311 - 3506344 + r 100 -28.3 -2.61912 | opp_overlap 3506311, overlap 3506310 ATCAGGCATGAGGAA GGGCGGATCCGGCAC CCCC GTGCCGGATCCGCCC CTTGTCCATCCGTCC TERM 1002 3506344 - 3506311 - R 100 -28.3 -3.22476 | opp_overlap 3506310 3506311 ATCAGGCATGAGGAA GGGCGGATCCGGCAC CCCC GTGCCGGATCCGCCC CTTGTCCATCCGTCC SCO3199 3507907 - 3506390 - | transmembrane efflux protein SCO3200 3507970 - 3508941 + | DeoR family transcriptional regulator SCO3201 3509954 - 3509244 - | TetR family transcriptional regulator TERM 1003 3510148 - 3510098 - R 81 -18.4 -3.12351 | overlap 3510101 CCCCGTGACACGGAA GGAGCCGGGCTGCGGC-GCCCC AGGGGGGTA GGGGCAGCCG-AGCCCGGCTCG GGAAGTCCCGGCGCC TERM 1004 3510145 - 3510101 - R 84 -18.7 -2.77182 | overlap 3510098 CGTGACACGGAAGGA GCCGGGCTGCGGC-GCCCC AGGGGGGTA GGGGCAGCCG-AGCCCGGC TCGGGAAGTCCCGGC SCO3202 3511379 - 3510381 - | RNA polymerase principal sigma factor SCO3203 3511595 - 3512110 + | phosphinothricin acetyltransferase SCO3204 3512904 - 3512143 - | hypothetical protein TERM 1005 3513477 - 3513428 - g 100 -26 -3.03124 | gap 1, overlap 3513434 GCTCACCCCCGAACA GCAGAAGTCCCTCGGCGA-GATC ATGCG GATCGTCGCCGAGGGACTTCAGC CGAGCGAAGCGGGTG TERM 1006 3513471 - 3513434 - g 91 -20.8 -3.52073 | gap 1, overlap 3513428 CCCCGAACAGCAGAA GTCCCTCGGCGA-GATC ATGCG GATCGTCGCCGAGGGAC TTCAGCCGAGCGAAG SCO3205 3513024 - 3513515 + | MarR family transcriptional repressor SCO3206 3515160 - 3513616 - | transmembrane efflux protein TERM 1007 3515224 - 3515205 - R 80 -7 -4.62069 | AAAAAGATGAGAAAA GGGGCGAG TGTG CCCGCACC GACGGCCCGCTGTCA SCO3207 3516036 - 3515302 - | TetR family transcriptional regulator TERM 1008 3516025 - 3516083 + g 76 -12.2 -3.92542 | opp_overlap 3516037 3516066, overlap 3516062 GACTGGGTTCACGAT CCGGGGAGGGAATCCCCGTTTCGCTCGG ACA CAGGTCTAAACGGGGAAACGATCCCCGG TTATTTCCCGCTGCC SCO3208 3516275 - 3517573 + | secreted protein SCO3209 3517633 - 3519207 + | transcriptional regulator SCO3210 3520903 - 3519449 - | 2-dehydro-3-deoxyheptonate aldolase SCO3211 3521676 - 3520900 - | indoleglycerol phosphate synthase SCO3212 3522680 - 3521673 - | anthranilate phosphoribotransferase SCO3213 3523299 - 3522697 - | anthranilate synthase component II SCO3214 3524831 - 3523296 - | anthranilate synthase component I SCO3215 3525844 - 3524828 - | hypothetical protein SCO3216 3526137 - 3528527 + | integral membrane ATPase TERM 1009 3528565 - 3528605 + F 100 -25.6 -3.85698 | gap 1, opp_overlap 3528567, overlap 3528567 GTACCGCCCGGTGAA GA-GGAGGGGACGCCCGGT CCGT GCCGGGCGTCCCCTCCGTC TTTGTGCGCCCCCCG TERM 1010 3528567 - 3528602 + F 100 -28.4 -2.70946 | opp_overlap 3528567, overlap 3528565 ACCGCCCGGTGAAGA GGAGGGGACGCCCGGT CCGT GCCGGGCGTCCCCTCC GTCTTTGTGCGCCCC TERM 1011 3528602 - 3528567 - f 100 -27.7 -3.01791 | opp_overlap 3528567 3528565 ACCGCCCGGTGAAGA GGAGGGGACGCCCGG TCCGTG CCGGGCGTCCCCTCC GTCTTTGTGCGCCCC SCO3217 3529272 - 3531188 + | transcriptional regulator TERM 1012 3531191 - 3531249 + T 100 -27.5 -2.53382 | gap 1 CCTCACCGACTGAGC CGGGAACGGCGACGGCCCGTACGCCCCC TGCC GGGGACGTACGGGCCGTCGTGGT-CCGG TCAGTTGCCGGTGCT SCO3218 3531465 - 3531250 - | hypothetical protein TERM 1013 3531284 - 3531304 + g 71 -10.4 -3.79906 | GCCTCCACGAGGCTC CTGGGCCG CATGT CGGTCCAG TTCTTCTCCACGTAC SCO3219 3532763 - 3531588 - | lipase (secreted protein) SCO3220 3533399 - 3532971 - | secreted protein SCO3221 3534346 - 3533492 - | prephenate dehydrogenase SCO3222 3534899 - 3534444 - | secreted protein TERM 1014 3535019 - 3534987 - R 100 -30.7 -3.18383 | ACCGGTATCGACGAA GGGGCCGTGCTCCGG CAG CCGGAGCACGGCCCC CGGCTCCCCCTGGGG SCO3223 3535848 - 3535054 - | ABC transporter integral membrane protein SCO3224 3536808 - 3535855 - | ABC transporter ATP-binding protein TERM 1015 3538266 - 3538228 - g 82 -19.5 -2.71144 | gap 1 GACGGCCGGCAACGA GGGGCGGGCCGCGGCCGC CGCG GCGGAC-CTGCCCGCCCC CTCCGGGCCGTGGCG SCO3225 3536945 - 3538660 + | two component sensor kinase SCO3226 3538679 - 3539347 + | two component system response regulator SCO3227 3540671 - 3539337 - | aminotransferase SCO3228 3541801 - 3540668 - | glycolate oxidase SCO3229 3543066 - 3541951 - | 4-hydroxyphenylpyruvic acid dioxygenase TERM 1016 3546405 - 3546384 - g 74 -13.7 -3.55444 | gap 1 CCGGGACCGGGGAAA CCGGCG-CCG GGG CGGACGCCGG GACCGGGACCGGGGC TERM 1017 3547581 - 3547616 + G 78 -17.7 -3.18023 | gap 2, overlap 3547579 CCGGGCTGCACCGCT CGCTGG-CCGCG-CTCG CCGC CGAGACGCGGACCAGCG TCTTCATGGTGCTCC TERM 1018 3551033 - 3551053 + G 77 -12.5 -3.71848 | GGCCGCGGCGACGAC GCCGTCGAC CAG GTCGTCGGC TTCTTCGTCAACACC TERM 1019 3551716 - 3551761 + G 82 -19 -3.15544 | gap 2, opp_overlap 3551704 3551707 GAACGAGCGCGCCAA CCG-GCT-GGCCCGCGCCCTGC TCGC GCGGGGCGCGGGCCCGGAGCGG TTCGTGGCGGTCGCC TERM 1020 3552880 - 3552860 - g 74 -16.1 -3.09516 | GCGGTCATCACCGAA CGCCCGCAC CTG GCGCGGGCG GCCGTGATCGTACGC TERM 1021 3557480 - 3557460 - g 76 -5.3 -4.50583 | overlap 3557461 3557462 AATACGACGAGAAAA CCGTGCGCG ACG CACTCACGA GCGCACTGCCCGACT TERM 1022 3563431 - 3563477 + G 77 -16.5 -3.1978 | gap 1, overlap 3563428 CACCCGGGCCTACGT GCTCGACCGGTACCTCCAGCCG GTGC CGGCCGGCG-TGCCGGGCGAGC TGTTCATCTCCGGCT TERM 1023 3563788 - 3563836 + G 84 -18.8 -3.28712 | gap 2 GGTCGGCTACGTGGT GGC-CGCGGCG-GGCCGGGACGGC GAG GTCGACCCGGACGCGCTGCGCGCC TTCTCCCGCCAGGCG SCO3230 3543335 - 3565726 + | CDA peptide synthetase I TERM 1024 3568713 - 3568729 + G 85 -13.7 -4.07568 | CACCCTCGGGCGGGA GCTGCCG ATC CGGCAGC TTTTCGAGACGCCGA TERM 1025 3570331 - 3570372 + G 71 -15 -3.15544 | GCGCGCGCCAACCGG CTGGCCCGGCATCTCGTC GCGCGG GGCGCGGCGCCGGGCCGG TTCGTGGCCGTGGCG TERM 1026 3576413 - 3576360 - g 74 -18.1 -2.71364 | GTACGGCTTCAACTA CCTGGGCCGCCACACCGGCG-GCCG GGGCGG CGGCGCACCGG-GCGGCGGCGCCGG GCCCGAGCCGTGGAG SCO3231 3565723 - 3576735 + | CDA peptide synthetase II TERM 1027 3577907 - 3577937 + G 72 -16.8 -2.87344 | opp_overlap 3577879, overlap 3577887 3577895 GGGTCTGCTGGCCCT GCCCCGCGAGACCC TGC GGTTCTCGCTGGGC TATCTGCCGCAGGTC SCO3232 3576735 - 3583988 + | CDA peptide synthetase III SCO3233 3583992 - 3584810 + | hydrolase SCO3234 3584822 - 3585724 + | phosphotransferase TERM 1028 3585776 - 3585744 - T 93 -22 -3.25823 | opp_overlap 3585744 CCCGGCGCACACGAA GGGGCCTCCCGGTG AAGTG CGCCGGGAGGCCCC TTCGTGTGGGGGGGG TERM 1029 3585744 - 3585776 + T 100 -24.2 -3.25823 | opp_overlap 3585744 CCCGGCGCACACGAA GGGGCCTCCCGGTG AAGTG CGCCGGGAGGCCCC TTCGTGTGGGGGGGG SCO3235 3587647 - 3585800 - | ABC transporter SCO3236 3588688 - 3587687 - | oxygenase SCO3237 3590134 - 3588746 - | hypothetical protein SCO3238 3591306 - 3590146 - | hypothetical protein SCO3239 3592182 - 3591313 - | hypothetical protein SCO3240 3592889 - 3592179 - | hypothetical protein SCO3241 3593758 - 3592886 - | putaive isomerase TERM 1030 3593039 - 3593008 - G 73 -18 -2.64616 | GCTCCACCGAGACCA GTCCGCGGTAGCCG GTGG CGGCCAGCGCGGAC AGCACGGGCGGGAAG TERM 1031 3593303 - 3593273 - G 78 -17.6 -3.14344 | CAGGGTGTCCACGAA CATGCCGGGCTCCG GTT CGAAGCCCAGCACG ACCCCGGCCCGCGCG SCO3242 3594630 - 3593755 - | puitative transferase SCO3243 3595793 - 3594627 - | myo-inositol phosphate synthase SCO3244 3596640 - 3595843 - | secreted protein TERM 1032 3596600 - 3596558 - G 74 -18.2 -2.78384 | GCGGCGCCCAGCAGA CCGGCGCCGGCGCCGAGGCC GAC GGCCGCGGCACCGCCGAGGG CGGTGGTCATCAGGC SCO3245 3597970 - 3596708 - | salicylate hydroxylase (secreted protein) SCO3246 3599009 - 3598017 - | 3-oxoacyl-(acyl carrier protein) synthase III SCO3247 3600808 - 3599006 - | acyl CoA oxidase SCO3248 3602078 - 3600858 - | 3-oxoacyl-[acyl carrier protein] synthase II SCO3249 3602320 - 3602075 - | acyl carrier protein TERM 1033 3602719 - 3602692 - R 100 -19.9 -4.3208 | opp_overlap 3602692 GGGCACAAGGGAAAA GGCCCCGGACC GATCAT GGTCCGGGGCC TTTGACATCCACTTC TERM 1034 3602692 - 3602719 + r 95 -20.6 -3.61103 | opp_overlap 3602692 GGGCACAAGGGAAAA GGCCCCGGACCG ATCA TGGTCCGGGGCC TTTGACATCCACTTC SCO3250 3603907 - 3602753 - | integrase SCO3251 3604107 - 3603907 - | excisionase SCO3252 3605504 - 3604104 - | replication initiator protein SCO3253 3605911 - 3605594 - | SpdD protein SCO3254 3606090 - 3605935 - | SpdC protein SCO3255 3606263 - 3606102 - | SpdB protein SCO3256 3606979 - 3606326 - | SpdA protein SCO3257 3608416 - 3607061 - | plasmid transfer protein SCO3258 3608776 - 3608420 - | regulatory protein SCO3259 3609695 - 3608916 - | korSA, regulatory protein SCO3260 3609789 - 3610178 + | MutT-like protein TERM 1035 3610219 - 3610199 - f 70 -13.9 -3.16564 | opp_overlap 3610207 3610210 TCCCTACTTCATCAA GGCCCGCGC ACG GCGCGGGCA CGCGCCGCCTCTACG TERM 1036 3610207 - 3610251 + F 79 -17.1 -3.01924 | gap 1, opp_overlap 3610199, overlap 3610210 TCATCAAGGCCCGCG CACGGCGCGGGCACGCGCCG CCTCTA CGGCGCG-GCCCGCCTCCTG TCTTCGCCCCGGCTG TERM 1037 3610210 - 3610249 + F 71 -15 -3.06696 | opp_overlap 3610199, overlap 3610207 TCAAGGCCCGCGCAC GGCG-CGGGCACGCGCCG CCTCTA CGGCGCG-GCCCGCCTCC TGTCTTCGCCCCGGC TERM 1038 3611020 - 3611037 + G 79 -2.7 -4.74504 | opp_overlap 3611022, overlap 3611022 ACAAGGACCGTAGGG AAGATCT CAGC AGATCTC TTTTTGGATTCCGGT TERM 1039 3611474 - 3611457 - g 85 -6.9 -4.73108 | overlap 3611458 TCTAGAAAACGAAAA GGGAGCC GGCC GGCTCCT TCAAAACGTCCTGGA TERM 1040 3611706 - 3611722 + G 71 -5.1 -4.25104 | GAAGGGGATTGCAAT TTACGCT CCA GGCGTGA TTTTGATCGACGAAG SCO3261 3610876 - 3612171 + | ATP-binding protein SCO3262 3612168 - 3612917 + | hypothetical protein TERM 1041 3613213 - 3613246 + T 70 -14 -3.18264 | gap 1, opp_overlap 3613213 TGACGAGCGACAGAA GCCCACGGCATCTGA ACTGG TCAGA-GCTGTGGGC TTCGTCGGTCAGCAG SCO3263 3613631 - 3613332 - | hypothetical protein SCO3264 3614359 - 3613628 - | GntR family regulator SCO3265 3614592 - 3614368 - | hypothetical protein SCO3266 3614792 - 3614589 - | hypothetical protein SCO3267 3614834 - 3615034 + | hypothetical protein SCO3268 3615400 - 3615122 - | secreted protein SCO3269 3615480 - 3616235 + | GntR family regulator SCO3270 3616286 - 3616798 + | hypothetical protein TERM 1042 3616956 - 3616989 + F 100 -28.3 -3.32963 | opp_overlap 3616956 GGCACCGGTTCAGAA GGGGCCCACCTCCGA ATTT TCGGAGGTGGGCCCC TTCTCACATCCACGT TERM 1043 3616989 - 3616956 - f 100 -28.3 -3.29511 | opp_overlap 3616956 GGCACCGGTTCAGAA GGGGCCCACCTCCGA ATTT TCGGAGGTGGGCCCC TTCTCACATCCACGT SCO3271 3617075 - 3617377 + | dehydrogenase SCO3272 3617980 - 3617612 - | DNA-binding protein SCO3273 3618213 - 3618479 + | hypothetical protein SCO3274 3618476 - 3618922 + | hypothetical protein SCO3275 3619469 - 3619017 - | merR family transcriptional regulator SCO3276 3619892 - 3621391 + | integral membrane transporter SCO3277 3622270 - 3621404 - | phosphotransferase SCO3278 3622465 - 3622593 + | hypothetical protein SCO3279 3622590 - 3623804 + | integral membrane efflux protein TERM 1044 3624400 - 3624361 - g 72 -11.5 -3.61715 | gap 2 CACGCCGGTCAACAA GTGGATGATCGGTCGCGGC AAGG GCCACG-CCG-TCGTCCAC GCCTACCACTGACCG SCO3280 3623801 - 3624412 + | hypothetical protein TERM 1045 3624436 - 3624469 + T 70 -13.8 -3.14344 | ACAGGTCCCGGCGAA CCGCTCGACGGCCT CAGCCC AGGCCGGCGAGCAG TTCCTGGCACGCCTG SCO3281 3624859 - 3624449 - | hypothetical protein cobH 3625007 - 3625663 + | precorrin-8X methylmutase SCO3283 3626462 - 3625695 - | cobalt-precorrin-6x reductase TERM 1046 3628203 - 3628174 - g 71 -13.5 -3.54424 | gap 1, overlap 3628156 CCTCACCCGGGGAAA CGGCGACGAG-GGC GAG GCCGCCCGGCGCCG TCTGGAACACATCCT SCO3284 3626633 - 3628768 + | hypothetical protein SCO3285 3634123 - 3628805 - | large glycine/alanine rich protein SCO3286 3636242 - 3634209 - | secreted protein TERM 1047 3634673 - 3634713 + g 72 -14 -3.35679 | GCCGGTACTCCTCGT GGCCGCG-CGAGGCGTCGTC CAG GGCGGC-CATCGCCGCGGCC TTCTCGGTGAGCCCG TERM 1048 3636271 - 3636311 + H 86 -19 -3.16564 | gap 1, overlap 3636273 ACGGCATGAGGCGGC TGTC-GCGGCGGCCGGACG AGCG CGGCCGGCCGCCGCCGATG TTGGTGGGGTGACGC TERM 1049 3636273 - 3636309 + H 93 -21.6 -3.14602 | gap 1, overlap 3636271 GGCATGAGGCGGCTG TC-GCGGCGGCCGGACG AGCG CGGCCGGCCGCCGCCGA TGTTGGTGGGGTGAC SCO3287 3636329 - 3636847 + | serine/arginine rich protein SCO3288 3636856 - 3637587 + | integral membrane protein SCO3289 3637594 - 3639204 + | large membrane protein TERM 1050 3639509 - 3639548 + G 74 -16.5 -3.14344 | gap 2, opp_overlap 3639509 CCTGCGGCCCAAGGA GTGGGAGGACCTGGTCCGG GCGA CCGG-CCAGG-CCTCCCCC TTCCTCGGCGACGTG TERM 1051 3639548 - 3639509 - g 70 -16.5 -2.70932 | gap 2, opp_overlap 3639509 CCTGCGGCCCAAGGA GTGGGAGGACCTGGTCCGG GCGA CCGG-CCAGG-CCTCCCCC TTCCTCGGCGACGTG SCO3290 3639201 - 3639950 + | hypothetical protein TERM 1052 3640443 - 3640390 - g 81 -11.5 -4.21768 | gap 1 CAACGAAGTGCAAAA GCG-CGTCCTCGAACTGCGCCGCGCC CTC GACCCCGCGCAGCGCGGTGACGGCGC CCGGGTGCTGCGCAC SCO3291 3640178 - 3641611 + | regulatory protein SCO3292 3642248 - 3641739 - | hypothetical protein SCO3293 3642811 - 3642308 - | small integral membrane protein SCO3294 3644163 - 3642817 - | transferase TERM 1053 3643712 - 3643765 + g 76 -15.2 -3.41051 | gap 3 ATCGCGAACGGGACC CGGCGC-GCCCCCGGCCGCCG-CTCGC CGA GCGGCTCGGCGGCCCGGAGCAGC-CCG TTCTCCTCGCGGTGC SCO3295 3644935 - 3644267 - | oxidoreductase SCO3296 3646035 - 3644932 - | oxidoreductase SCO3297 3646131 - 3646469 + | hypothetical protein SCO3298 3646539 - 3647321 + | oxidoreductase TERM 1054 3647339 - 3647303 - T 100 -21.7 -3.36273 | gap 1 GGCCTCGAACACGAA GGTGCACCGGGAGGCG TAGACC CGCC-CCCGGTGCACC TGGCGCGTCCGGGCG SCO3299 3648548 - 3647355 - | hypothetical protein SCO3300 3648648 - 3649631 + | secreted serine-rich protein SCO3301 3649764 - 3650615 + | secreted protein SCO3302 3650705 - 3652006 + | integral membrane protein lysK 3654001 - 3652259 - | lysyl-tRNA synthetase argS 3654175 - 3655935 + | arginyl-tRNA synthetase TERM 1055 3655951 - 3656007 + TF 95 -26.6 -2.90212 | overlap 3655946 CGCCGCGCCTCGGGC GTACGATCTGCGGCCCGTCCTCTCCC CGCGA GGGAGGGGGCGGGCCGCATCGCGTAC TGTGTCCCGTCGTCC TERM 1056 3656115 - 3656085 - gT 86 -15.4 -3.92324 | overlap 3656086 3656103 GGTGCGAATAGGAAA GGCGTCCGCCGG GAGCAAG CCGGCGGACGCG CCTCGAGGGAGCGTC TERM 1057 3656114 - 3656086 - gT 84 -18.9 -2.95073 | overlap 3656085 3656103 GTGCGAATAGGAAAG GCGTCCGCCGG GAGCAAG CCGGCGGACGC GCCTCGAGGGAGCGT TERM 1058 3656137 - 3656103 - gT 73 -14.9 -3.14132 | overlap 3656086 3656085 GTCCGCCGGGAGCAA GCCGGCGGACGCGCC TCGAG GGAGCGTCGGCCAGC AGGCACCCCGCGGCC SCO3306 3658543 - 3657329 - | aminotransferase SCO3305 3656071 - 3657396 + | hypothetical protein SCO3307 3659537 - 3658635 - | hypothetical protein SCO3308 3661035 - 3659641 - | DNA-binding protein TERM 1059 3661139 - 3661169 + r 72 -16.1 -2.82516 | GCATGATCGCCCACC GCTGGCGGCTGGG ACGAA CCCGGCCGCAAGC TGTGGTCATCAAAGC SCO3309 3661555 - 3661178 - | hypothetical protein SCO3310 3661737 - 3661991 + | hypothetical protein SCO3311 3663042 - 3662050 - | delta-aminolevulinic acid dehydratase SCO3312 3663566 - 3663976 + | hypothetical protein SCO3313 3664890 - 3663973 - | hypothetical protein SCO3314 3666136 - 3665180 - | dehydrogenase SCO3315 3666265 - 3666957 + | transcriptional regulator SCO3316 3667756 - 3666980 - | dehydrogenase SCO3317 3669720 - 3668023 - | uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase hemC 3670676 - 3669717 - | porphobilinogen deaminase TERM 1060 3669838 - 3669886 + g 79 -12.9 -3.91352 | CCGGTGGTGGACAGC TGCACCAGCGTCGAGCCGTCGGT CGT GCCGACGACGCCGCGCAGGCGCA TTTCCTTGACAGTCT hemA 3672418 - 3670673 - | glutamyl-tRNA reductase SCO3320 3673191 - 3672415 - | redox-sensing transcriptional repressor Rex SCO3321 3673771 - 3673466 - | redoxin SCO3322 3673970 - 3674866 + | hypothetical protein SCO3323 3675442 - 3675975 + | RNA polymerase sigma factor SCO3324 3676214 - 3677473 + | hypothetical protein SCO3325 3678582 - 3677515 - | hypothetical protein SCO3326 3679658 - 3678597 - | epimerase TERM 1061 3679832 - 3679774 - R 78 -2.5 -4.79223 | gap 5, overlap 3679775 3679788 3679825 3679828 GCACATGACGAAAAA TGGCGGCCGAACGACTGTGGCCCCCCACCG AATA CGGTGAGGGGCCACAGAC---C-A-CGCCG ACGGCGCAGCGTCGC TERM 1062 3679823 - 3679788 - R 95 -27 -2.71011 | overlap 3679774 3679775 ATGGCGGCCGAACGA CTGTGGCCCCCCACCG AATA CGGTGAGGGGCCACAG ACCACGCCGACGGCG SCO3327 3679946 - 3679848 - | hypothetical protein SCO3328 3680268 - 3680056 - | hypothetical protein SCO3329 3681213 - 3680398 - | hypothetical protein SCO3330 3682610 - 3681507 - | acetoin utilization protein SCO3331 3683877 - 3682630 - | transmembrane transport protein SCO3332 3684617 - 3683901 - | hypothetical protein SCO3333 3685341 - 3684694 - | hydrolase TERM 1063 3685393 - 3685360 - H 88 -21.1 -2.66098 | opp_overlap 3685355 3685352, overlap 3685365 AAGACCCTAAACGCA GAAAACCCCGCACCG TTCC CGGTGCGGGGTCTCC CAGCAATAATTGTTC TERM 1064 3685388 - 3685365 - H 100 -19.6 -4.51196 | opp_overlap 3685355 3685352, overlap 3685360 CCTAAACGCAGAAAA CCCCGCACCG TTCC CGGTGCGGGG TCTCCCAGCAATAAT TERM 1065 3685543 - 3685563 + H 70 -9.7 -3.79909 | opp_overlap 3685540 3685533 TGAAACACTCAACCG CACCATGTG TGG CACATGGGG TTGTTCGTGGTTTCA TERM 1066 3686054 - 3686070 + H 70 -2.9 -4.4715 | overlap 3686056 GGGGAAGATCAGCCT GTTATCC CCG GGGTACC TTTTATCCGTTGAGC TERM 1067 3686716 - 3686727 + H 74 -2.2 -4.7254 | CGCCTTACGGCTTCG CACG GACC TGTG TTTTTAGTAAACAGT TERM 1068 3690965 - 3690993 + H 84 -13.8 -3.91716 | opp_overlap 3690982, overlap 3690984 3690988 3690989 AGACTCTAGCGGACT CCCGGCTCCCGA GCTAA TCGGGGGCCGCG TTCTTTCGAACGTGG TERM 1069 3691287 - 3691307 + H 93 -19.7 -3.50045 | CACGTATGCACTCGA CGGCCGCCG CTT CGGCGGCCG TTCTCGTATCTCCCT SCO3334 3691374 - 3692384 + | tryptophanyl-tRNA synthetase SCO3335 3693343 - 3692339 - | AraC family transcription regulator SCO3336 3693418 - 3693999 + | hydrolase SCO3337 3694917 - 3694063 - | pyrroline-5-carboxylate reductase SCO3338 3695923 - 3695123 - | integral membrane protein SCO3339 3696750 - 3695920 - | ABC transporter ATP-binding subunit SCO3340 3697673 - 3696891 - | hypothetical protein SCO3341 3699173 - 3698670 - | integral membrane protein SCO3342 3699889 - 3699215 - | glycine-rich secreted protein SCO3343 3700430 - 3700056 - | hypothetical protein TERM 1070 3700427 - 3700409 - G 73 -16 -3.01712 | TCCCCCCGTTGAACA CCCCGCGA CTT TCGCGGGG CACCGTTGATACCCC SCO3344 3700571 - 3702733 + | serine/threonine protein kinase SCO3345 3704612 - 3702759 - | dihydroxy-acid dehydratase SCO3346 3705382 - 3704768 - | transcriptional regulator SCO3347 3706236 - 3705379 - | hypothetical protein SCO3348 3707327 - 3706398 - | DNA-binding protein SCO3349 3707399 - 3708214 + | hypothetical protein SCO3350 3710074 - 3708278 - | hypothetical protein TERM 1071 3710760 - 3710718 - g 70 -13.5 -3.34192 | overlap 3710719 AAGTCCGCCAAGGAA CGGCCGTCCTACC-GCTGCAC CGA GTGCGGCTGGCA-GACGGCCA AGTGGCTCGGCCGCT SCO3351 3710688 - 3712097 + | DNA repair protein RadA SCO3352 3712179 - 3713303 + | DNA integrity scanning protein DisA TERM 1072 3713308 - 3713346 + T 87 -16 -3.61398 | overlap 3713309 3713311 GTTACGTCTGACGCG TGGCGGACCCGAGGCG GCGGCCG CGCCTCGGGTCAGTCG TTCTTGAGGACGAAC TERM 1073 3713309 - 3713345 + T 76 -17.3 -2.76696 | overlap 3713308 3713311 TTACGTCTGACGCGT GGCGGACCCGAGGCG GCGGCCG CGCCTCGGGTCAGTC GTTCTTGAGGACGAA TERM 1074 3713311 - 3713343 + T 73 -16.3 -2.93073 | overlap 3713309 3713308 ACGTCTGACGCGTGG CGGACCCGAGGCG GCGGCCG CGCCTCGGGTCAG TCGTTCTTGAGGACG SCO3353 3713720 - 3713340 - | hypothetical protein SCO3354 3713731 - 3714135 + | hypothetical protein SCO3355 3714378 - 3715304 + | adenine glycosylase SCO3356 3715604 - 3716137 + | ECF sigma factor TERM 1075 3716171 - 3716218 + F 72 -11.8 -3.64822 | opp_overlap 3716171 3716174 GGGGGACCCGGAGAA CCACGCAGGCGGCGAGTACGGC GGTG GCCGTGTTCGTCGCCCTCGGCG TTTCCCTGGCCGGCT SCO3357 3716194 - 3716802 + | hypothetical protein SCO3358 3716926 - 3717630 + | two-component system response regulator SCO3359 3717647 - 3719170 + | sensory histidine kinase contains hydrophobic membrane spanning regions SCO3360 3720033 - 3719200 - | hypothetical protein SCO3361 3720577 - 3720125 - | transcription regulator AsnC SCO3362 3720696 - 3721331 + | hypothetical protein TERM 1076 3721698 - 3721756 + G 71 -4.9 -4.30576 | opp_overlap 3721717 GCTGCGGGGCAGTCC CGCCCAGCGGCTCTACGAACGGCACGG ATTCG CCGTGGAGAGCGAGGATCCGGTGGACG TTTTCATGGTGCGGG SCO3363 3721342 - 3721785 + | acetyltransferase SCO3364 3721792 - 3722244 + | hypothetical protein SCO3365 3723256 - 3722414 - | hypothetical protein TERM 1077 3723810 - 3723779 - R 100 -21.6 -3.72027 | ACGGCGGACGAAGAA GGCCCCCGGGTGGT CGGA ACCATCCGGGGGCC TGGTCGGGAGGAAGG SCO3366 3725439 - 3723844 - | exporter TERM 1078 3725397 - 3725426 + g 76 -5.5 -4.38154 | gap 1, overlap 3725395 TCCTCGGCTGCTTGC CGGCGCCGGC-TCC ACC GGTCGCCGCCTCCG TTTTCTCGGCCATCT SCO3367 3725598 - 3726185 + | TetR family transcriptional regulator SCO3368 3726905 - 3726219 - | peptidase (secreted protein) SCO3369 3727304 - 3729892 + | large ATP-binding protein SCO3370 3729902 - 3732487 + | large ATP-binding protein SCO3371 3732558 - 3733277 + | hypothetical protein SCO3372 3733321 - 3736353 + | large ATP-binding protein TERM 1079 3736407 - 3736374 - T 91 -16.7 -3.78775 | opp_overlap 3736374 GTGGGCATGACGAAA GGGGCTGCCCTGGAC CGAG GTCCGGAACAGCCCC TTTCTCGACTCAGCC TERM 1080 3736374 - 3736407 + T 86 -14.5 -3.89346 | opp_overlap 3736374 GTGGGCATGACGAAA GGGGCTGCCCTGGAC CGAG GTCCGGAACAGCCCC TTTCTCGACTCAGCC SCO3373 3738956 - 3736431 - | Clp-family ATP-binding protease SCO3374 3739398 - 3740099 + | hypothetical protein SCO3375 3740435 - 3740100 - | Lsr2-like protein TERM 1081 3740462 - 3740500 + r 78 -12.2 -3.88946 | TCATCGATAACTTGA GGGCCGGGGGTCCGTCGG CGT CCGCCGTATCGCCGTCCC TTGTTATATGCAGTA TERM 1082 3740581 - 3740562 - R 72 -3.4 -4.55887 | overlap 3740558 3740575 CCGGAAAAACACAAA CCCCCGGC AGAG ACCGGTAG CTCGACTCCGGGCCG SCO3376 3741220 - 3740711 - | N-acetylglutamate synthase TERM 1083 3740917 - 3740902 - G 73 -2.4 -4.61199 | overlap 3740904 AGGTCAGACAGAAAA CGCGGC GAAC ACCGAG CCAGCGTGCCGTGTC TERM 1084 3741250 - 3741276 + r 90 -17.2 -3.61178 | GCTCGCCGCCGTCCG CTACCGCGCCGG GTC CCGGCGCGGGGG TTTCCGGTCCCTGCA SCO3377 3741604 - 3741230 - | hypothetical protein TERM 1085 3741752 - 3741714 - R 76 -8.1 -4.41844 | gap 1, overlap 3741715 3741716 AAAACGGGCACAAAA GGGGCGTACGGCT-CCTC GGAA GAGGGAGCCGTACGCGGT CCGCCAGGGGTCAGG SCO3378 3741942 - 3741763 - | small membrane protein SCO3379 3742592 - 3741966 - | hypothetical protein TERM 1086 3742671 - 3742622 - R 71 -9.1 -4.1347 | gap 1, overlap 3742616 3742623 CGCTAATCAGACAAA CCCCGCATAGGGTGCGCGGGTGTG GCG CACGCCCCCAC-CCGGATGCGGGT GCCTGCGGCGGCCTG SCO3380 3743823 - 3743026 - | pantothenate kinase SCO3381 3744818 - 3743829 - | nicotinate-nucleotide pyrophosphorylase SCO3382 3746566 - 3744824 - | L-aspartate oxidase TERM 1087 3745879 - 3745907 + g 70 -14.5 -3.21099 | CGCGCAGGGCGAGGG CCACTCCGTCGCC CGT GGAGACGGAGGGG TTCGTCGTCGCCGAG SCO3383 3747576 - 3746563 - | pantoate-amino acid ligase SCO3384 3748835 - 3747573 - | hypothetical protein TERM 1088 3747833 - 3747859 + g 74 -7.8 -4.13767 | GGGCCGGGACGTCCT CCGGGCCAGGGG CGC CCTCGGGGTCGG TTTTGGCATCGGGGG TERM 1089 3749133 - 3749191 + G 74 -16.5 -3.14344 | gap 2 AGCGCGACAGGCGCA GCCGGGAGCGGCGCGTGGCCGCCCTCCGC GGC GCGCGGCGCGTACTCGC-CCGC-CCCGGC TTCGTCACGACCCTG SCO3385 3749036 - 3750247 + | L-allo-threonine aldolase SCO3386 3750419 - 3750691 + | hypothetical protein TERM 1090 3751312 - 3751296 - g 70 -13.7 -3.28712 | CCTGCTGCGCCACAA GGGCCTC GCC GAGGCCC TGGCCGCCGTGTCCC SCO3387 3750688 - 3751794 + | transcriptional regulator SCO3388 3752478 - 3751837 - | TmrB-like protein SCO3389 3753213 - 3752539 - | two component system response regulator SCO3390 3754484 - 3753279 - | two component sensor kinase TERM 1091 3755567 - 3755609 + G 72 -11.8 -3.61356 | overlap 3755568 GCGCCCTGGCAAGCG CCTCCCAGGGCGCCGAGC TGACCGC GCGCGGCGGCCTGGGCGA TTTCCGGTGGCTGCT SCO3391 3754603 - 3755691 + | hypothetical protein SCO3392 3756807 - 3755656 - | NADH dehydrogenase subunit NuoD2 SCO3393 3756941 - 3757396 + | integral membrane protein SCO3394 3757393 - 3759117 + | hypothetical protein SCO3395 3760322 - 3759147 - | secreted protein SCO3396 3761706 - 3760573 - | hypothetical protein SCO3397 3761869 - 3763674 + | integral membrane lysyl-tRNA synthetase SCO3398 3764143 - 3765009 + | dihydropteroate synthase SCO3399 3765006 - 3765509 + | hypothetical protein SCO3400 3765814 - 3766173 + | dihydroneopterin aldolase SCO3401 3766170 - 3766781 + | hydroxymethyldihydropteridine pyrophosphokinase SCO3402 3766852 - 3767340 + | secreted protein folE 3767961 - 3767356 - | GTP cyclohydrolase I TERM 1092 3768005 - 3768043 + r 89 -22.6 -2.52676 | gap 1, opp_overlap 3768005 GACGGCATACGAAAA TGCCGCACCCCCCAAGG CTAGAA CCT-GGGGGGTGCGGCA TACATTCCGGGCCTG TERM 1093 3768043 - 3768005 - R 100 -24 -4.35116 | opp_overlap 3768005 GACGGCATACGAAAA TGCCGCACCCCCCAAG GCTAGAA CCTGGGGGGTGCGGCA TACATTCCGGGCCTG SCO3404 3770099 - 3768093 - | cell division protein ftsH-like protein TERM 1094 3769488 - 3769440 - G 70 -13 -3.43492 | gap 1, opp_overlap 3769447 GGAGATCGAGTAGAA CGGCACG-CCCGCCTCGCCCGCG ACGG CACGCGCGAGCAGGGTCTTGCCG GTACCGGGCGGGCCG SCO3405 3770892 - 3770329 - | hypoxanthine phosphoribosyltransferase SCO3406 3772022 - 3770964 - | hypothetical protein SCO3407 3773342 - 3772215 - | hypothetical protein SCO3408 3774843 - 3773464 - | hypothetical protein SCO3409 3775145 - 3775636 + | inorganic pyrophosphatase TERM 1095 3775649 - 3775689 + F 100 -23.4 -3.65351 | gap 1, overlap 3775651 3775656 TGATCAGGCGCCTCT CCCGTAACGGGCCGCACGC ACAC GCGTGCGGCCCGTT-CGTG TTTGAGTGACCATAC TERM 1096 3775651 - 3775687 + F 100 -24.6 -3.40775 | gap 1, overlap 3775649 3775656 ATCAGGCGCCTCTCC CGTAACGGGCCGCACGC ACAC GCGTGCGGCCCGTT-CG TGTTTGAGTGACCAT TERM 1097 3775656 - 3775683 + F 100 -24.2 -3.47029 | overlap 3775651 3775649 GCGCCTCTCCCGTAA CGGGCCGCACGC ACAC GCGTGCGGCCCG TTCGTGTTTGAGTGA SCO3410 3775723 - 3777459 + | hypothetical protein SCO3411 3778367 - 3777456 - | membrane protein TERM 1098 3777710 - 3777753 + g 76 -12.2 -3.96068 | gap 1, overlap 3777715 GCTGGGGCTGGTGCT GCTGGGCGGCCGGCGGGGTCG GTC CGGCCGCGGCGGC-GCGCTGC TTCTTCTTGCGCTCG SCO3412 3778548 - 3778868 + | hypothetical protein SCO3413 3779675 - 3778914 - | transcriptional regulator SCO3414 3780231 - 3779785 - | transcriptional regulator SCO3415 3780468 - 3781268 + | esterase SCO3416 3781328 - 3782755 + | glutamate decarboxylase SCO3417 3783685 - 3782903 - | ABC transporter transmembrane component SCO3418 3784629 - 3783682 - | ABC transporter ATP-binding component SCO3419 3785358 - 3784717 - | hypothetical protein SCO3420 3786901 - 3785441 - | aldehyde dehydrogenase SCO3421 3787801 - 3786977 - | hypothetical protein SCO3422 3788114 - 3787911 - | hypothetical protein SCO3423 3788179 - 3788643 + | regulator SCO3424 3788943 - 3788692 - | regulator TERM 1099 3789224 - 3789171 - R 100 -22.5 -3.75144 | gap 1, opp_overlap 3789181, overlap 3789174 AAGAATATGCAACAA CATGCGACAACACCGGGGCCCGAACG GTA CAGGCGTGCCCCGGTGTTGTCGC-TG GTGCGTGAGGTACGG TERM 1100 3789222 - 3789174 - R 95 -25.3 -2.65987 | opp_overlap 3789181, overlap 3789171 AATATGCAACAACAT GCGACAACACCGGGGCCCGAACG GTA CAGGCGTGCCCCGGTGTTGTCGC TGGTGCGTGAGGTAC SCO3425 3789487 - 3789248 - | 30S ribosomal protein S18 SCO3426 3790681 - 3789569 - | hypothetical protein rpmE2 3790932 - 3790678 - | 50S ribosomal protein L31 type B rpmG 3791103 - 3790939 - | 50S ribosomal protein L33 rpmB 3791176 - 3791412 + | 50S ribosomal protein L28 rpsN 3791412 - 3791717 + | 30S ribosomal protein S14 SCO3431 3791719 - 3792453 + | membrane protein SCO3432 3793668 - 3792412 - | hypothetical protein TERM 1101 3793362 - 3793324 - G 70 -13.7 -3.28712 | gap 1, overlap 3793325 GGTGGCGTGCGAGAA GCGGTCGGTG-CGGGGCG GCGC CGCCCCGTCCCCGCCCGG CAGGTCGTCGAGCTG TERM 1102 3793361 - 3793325 - G 73 -17.2 -2.57132 | gap 1, overlap 3793324 GTGGCGTGCGAGAAG CGGTCGGTG-CGGGGCG GCGC CGCCCCGTCCCCGCCCG GCAGGTCGTCGAGCT TERM 1103 3793730 - 3793702 - H 70 -14.7 -2.98823 | CTCCGGGGACACACA TCGACTGTCAACC ATC GGTTGACAGTCCA AGGGGCGCAACCTAC SCO3433 3793755 - 3794531 + | hypothetical protein TERM 1104 3794679 - 3794703 + F 75 -14.9 -3.35798 | overlap 3794680 CGTGCGCAATGGCCG TGGCCGACGGC ATG GCCGACGGCCG TTGTCAGTCCCGCCT TERM 1105 3794680 - 3794702 + F 71 -16.2 -2.61264 | overlap 3794679 GTGCGCAATGGCCGT GGCCGACGGC ATG GCCGACGGCC GTTGTCAGTCCCGCC SCO3434 3794733 - 3796424 + | DNA polymerase I SCO3435 3796515 - 3797402 + | transcriptional regulator SCO3436 3797490 - 3799043 + | fatty acid CoA ligase TERM 1106 3799100 - 3799066 - T 100 -19.4 -4.52589 | opp_overlap 3799069 TCCCCGGACACAAAA GAAGACCAGGCCGGAC AAC ATCCGACCTGGCCTTC GCTTGAGCCGCCTTC TERM 1107 3799680 - 3799711 + T 73 -6.4 -4.37734 | gap 1, overlap 3799675 3799674 3799681 AGAGCCGGTGGACCG GCCCGGC-CGGGCGT TTC ACCCCCGCGCCGCGA TTTTCAGTTGTTCTC SCO3437 3800455 - 3799715 - | integral membrane protein SCO3438 3801675 - 3800452 - | hypothetical protein TERM 1108 3801867 - 3801840 - g 75 -12.6 -3.64703 | overlap 3801841 GGTGGCCGACGGAAA GCCCCCGCGGGC ACCG GCCCACGAGGGT GCGCCGTTGCGGGAC TERM 1109 3801866 - 3801841 - g 70 -16.1 -2.78679 | overlap 3801840 GTGGCCGACGGAAAG CCCCCGCGGGC ACCG GCCCACGAGGG TGCGCCGTTGCGGGA SCO3439 3801757 - 3802629 + | hypothetical protein SCO3440 3802689 - 3803408 + | hypothetical protein SCO3441 3803405 - 3803974 + | secreted protein TERM 1110 3804236 - 3804202 - g 83 -15.1 -3.61398 | gap 1, overlap 3804166 3804213 CCGGTCGGTCAACAA CGGCAACGA-GACCGT GCCG ACGGTCGCCGTCGCCG GGCATCCGCTGACCA SCO3442 3804032 - 3804376 + | hypothetical protein SCO3443 3806037 - 3804673 - | pyridine nucleotide-disulphide oxidoreductase SCO3444 3808032 - 3806179 - | hypothetical protein TERM 1111 3806378 - 3806367 - G 71 -7.2 -4.10657 | overlap 3806368 CGACACGGTCGAAAA GGGC CTGT GCCC GGTCCGGCCGACCGG SCO3445 3808335 - 3808168 - | small membrane protein SCO3446 3809106 - 3808429 - | dehalogenase SCO3447 3809930 - 3809247 - | transcriptional regulatory protein SCO3448 3810261 - 3809959 - | hypothetical protein SCO3449 3810672 - 3810352 - | hypothetical protein SCO3450 3811274 - 3810669 - | ECF subfamily RNA polymerase sigma factor SCO3451 3811392 - 3811703 + | hypothetical protein SCO3452 3812845 - 3811766 - | methyltransferase SCO3453 3814025 - 3812961 - | ABC-transporter ATP binding protein TERM 1112 3813813 - 3813758 - G 91 -23.9 -3.01712 | opp_overlap 3813761 TGGGCTGCTGGAAGA CCACCGCGGCACCGCGGTGTTCCGG CGGAAC CCGGGTCACCTCGGTGCCACGGAGG TGTACGGCGCCCCGG SCO3454 3814873 - 3814031 - | ABC-transporter membrane protein SCO3455 3815727 - 3814870 - | ABC-transporter transport protein SCO3456 3816989 - 3815736 - | hypothetical protein TERM 1113 3815991 - 3816012 + g 72 -12.3 -3.61398 | gap 1, opp_overlap 3815987 GTCGGACAGCACGAG CGCCGCCTCA CGG TG-GGCGGCG TTCTTGGGCACCGCG TERM 1114 3817278 - 3817327 + G 70 -16.3 -2.62616 | gap 1 GACGGGTCTTGCCTC GGC-CGGTTCCGCAGCAGCCGGCT GGT GGCCGGCCGCTGCGGCGCTGTGGC TGCTGTCCCGGCTCG SCO3457 3817153 - 3817770 + | transmembrane protein SCO3458 3818494 - 3817745 - | integral membrane protein SCO3459 3819354 - 3818491 - | hypothetical protein SCO3460 3819415 - 3820932 + | oxidoreductase SCO3461 3820929 - 3821387 + | integral membrane protein SCO3462 3821387 - 3822823 + | hypothetical protein SCO3463 3822850 - 3823638 + | phosphorylase SCO3464 3823677 - 3824309 + | hypothetical protein SCO3465 3824306 - 3825016 + | hypothetical protein TERM 1115 3825154 - 3825138 - f 79 -7.9 -4.46656 | opp_overlap 3825138 CGGAGAAGACGAAAA CGACCTC TCA GAGGGCG TTTATGCAGTTCAAA SCO3466 3825371 - 3826210 + | transposase TERM 1116 3826256 - 3826240 - f 82 -13.7 -3.86202 | opp_overlap 3826240, overlap 3826219 TCTGACTAGATCAAA CGCCCTC TCA GAGGGCG TTTATGCAGTTCAAA TERM 1117 3826240 - 3826256 + F 84 -13.7 -3.92522 | opp_overlap 3826219 3826240 TCTGACTAGATCAAA CGCCCTC TCA GAGGGCG TTTATGCAGTTCAAA SCO3467 3826473 - 3827312 + | transposase SCO3468 3827457 - 3828962 + | transposase SCO3469 3830584 - 3829043 - | transposase SCO3470 3831525 - 3830698 - | transposase SCO3471 3832634 - 3831705 - | extracellular agarase precursor SCO3472 3833251 - 3832988 - | transposase remnant SCO3473 3834702 - 3834055 - | aldolase SCO3474 3835742 - 3834741 - | sugar kinase SCO3475 3837003 - 3835870 - | isomerase TERM 1118 3836319 - 3836356 + g 84 -19.2 -3.28712 | gap 1, overlap 3836304 CGGCCGCGATCGGCA CGTTCGTCGCCCTGGCG ATCTC CGCCAGGGCGTCGA-CG TTCTCCGGGAGACAC SCO3476 3837971 - 3837216 - | short-chain dehydrogenase SCO3477 3839002 - 3837968 - | dehydrogenase SCO3478 3840033 - 3838999 - | dehydrogenase SCO3479 3843382 - 3840395 - | beta-galatosidase TERM 1119 3841840 - 3841823 - G 70 -14.1 -3.24747 | CTCGCACATGATCAA GGGGCGG TCCG CCGCCCC GGCGGCCACCTGCTC SCO3480 3844608 - 3843523 - | racemase SCO3481 3845782 - 3844670 - | hypothetical protein SCO3482 3846690 - 3845809 - | sugar-permease SCO3483 3847649 - 3846702 - | integral membrane transport protein SCO3484 3848995 - 3847685 - | secreted sugar-binding protein SCO3485 3850226 - 3849177 - | LacI family transcriptional regulator TERM 1120 3849788 - 3849747 - G 76 -11.3 -3.85698 | overlap 3849749 CTCCCGGTTGAGAAA GACGTGCGCCAGCCCACCG CGAT CGGCGAGGAGGCGCTCGAC CAGGGGGTGCTCCGG TERM 1121 3849786 - 3849749 - G 71 -12.5 -3.51934 | overlap 3849747 CCCGGTTGAGAAAGA CGTGCGCCAGCCCACCG CGAT CGGCGAGGAGGCGCTCG ACCAGGGGGTGCTCC SCO3486 3850388 - 3851866 + | aldehyde dehydrogenase SCO3487 3852249 - 3854645 + | hydrolase SCO3490 3855405 - 3856946 + | transposase TERM 1122 3857362 - 3857391 + F 86 -20.7 -2.92475 | overlap 3857362 CCTTTTTCTGACCGA CCGGGCGTCCCGC TGCG GCGGGACGCCCCG GTTTCTGCCGATGCC TERM 1123 3857362 - 3857392 + F 100 -20.5 -3.87815 | gap 1, overlap 3857362 CCTTTTTCTGACCGA CCGGG-CGTCCCGC TGCG GCGGGACGCCCCGG TTTCTGCCGATGCCC SCO3491 3857600 - 3858133 + | transmembrane protein SCO3492 3858431 - 3858303 - | hypothetical protein SCO3493 3859008 - 3858421 - | acetyl transferase SCO3494 3860043 - 3859063 - | sugar kinase SCO3495 3860717 - 3860040 - | aldolase SCO3496 3862690 - 3861209 - | lyase precursor TERM 1124 3863103 - 3863143 + r 100 -28.5 -2.8805 | TCGTTGTACCGTGCT GGATGGTGCCGGGCCTC CCAGTCC GAGGCCCGGCACCATCC TCTGTCAGGAGTGGT SCO3497 3863927 - 3863148 - | polyguluronate lyase precursor SCO3498 3865052 - 3863976 - | secreted protein SCO3499 3865636 - 3865049 - | integral membrane protein SCO3500 3867689 - 3865647 - | hypothetical protein SCO3501 3869381 - 3867696 - | hypothetical protein SCO3502 3870205 - 3869438 - | 3-oxoacyl-[acyl carrier protein] reductase SCO3503 3871100 - 3870261 - | binding protein dependent transport protein SCO3504 3872160 - 3871177 - | binding protein dependent transport protein TERM 1125 3871821 - 3871785 - G 73 -5.8 -4.26076 | gap 1 TCACGTTGAGCAAAA GTGCCAG-GACCACTGC GATC ACCATGGCCACCGGCAC GGTGAAGAAGGTGAA SCO3505 3873454 - 3872165 - | secreted substrate binding protein TERM 1126 3873325 - 3873347 + g 76 -14.8 -3.32844 | opp_overlap 3873308 GGGTGAGCAGCCGCA GGGAGGCGTC ACC GCCGCCTCCC TTCTGGGGTGCGGGA SCO3506 3873615 - 3874676 + | LacI family transcriptional regulator SCO3507 3874761 - 3876263 + | integral membrane efflux protein SCO3508 3877191 - 3877628 + | maturase-related protein SCO3509 3877697 - 3878659 + | hypothetical protein TERM 1127 3878711 - 3878670 - T 100 -31.8 -3.68988 | opp_overlap 3878670 CCTGACTCAACAGAA GGGGCGGCTGGTGCATCG GTTAGT CGATGCACCAGCCGCCCC TTTGGCGTCTGTGGG TERM 1128 3878670 - 3878711 + T 100 -32.5 -3.65425 | opp_overlap 3878670 CCTGACTCAACAGAA GGGGCGGCTGGTGCATCGG TTAG TCGATGCACCAGCCGCCCC TTTGGCGTCTGTGGG SCO3510 3879503 - 3878757 - | DNA methylase TERM 1129 3879930 - 3879972 + H 79 -17.7 -2.70932 | overlap 3879923 3879932 AGGCGGATGCACATC GGCGCGGTGCCGACGGCTT TGCAC GAGAAGTCGGCACCGCGTC TCCTTCGAACACCGA TERM 1130 3879932 - 3879970 + H 77 -16.7 -2.90075 | overlap 3879923 3879930 GCGGATGCACATCGG CGCGGTGCCGACGGCTT TGCAC GAGAAGTCGGCACCGCG TCTCCTTCGAACACC SCO3511 3880083 - 3881228 + | lipoprotein SCO3512 3881317 - 3881625 + | integral membrane protein SCO3513 3881625 - 3882305 + | secreted protein SCO3514 3882333 - 3883742 + | ATP-binding protein SCO3515 3883874 - 3885340 + | integral membrane protein SCO3516 3885367 - 3885819 + | hypothetical protein SCO3517 3885882 - 3887351 + | ATP-binding protein SCO3518 3887444 - 3888079 + | hypothetical protein SCO3519 3888210 - 3888821 + | hypothetical protein SCO3520 3888872 - 3889636 + | hypothetical protein SCO3521 3890456 - 3889752 - | integral membrane protein SCO3522 3890792 - 3890457 - | transcriptional regulator SCO3523 3891104 - 3891829 + | hypothetical protein SCO3524 3891921 - 3892586 + | hypothetical protein SCO3525 3892682 - 3893122 + | hypothetical protein TERM 1131 3893883 - 3893837 - g 77 -18.7 -2.77899 | gap 2, overlap 3893834 CCTGCTGAGCAAGGA CGGCGGCGGCAGCGCGTCCGCGA TCA TCGCGG-CA-GCGGCCGACGCCG TGATGCGCGCGGCCG SCO3526 3893187 - 3894470 + | hypothetical protein SCO3527 3894467 - 3894697 + | hypothetical protein SCO3528 3894706 - 3895866 + | hypothetical protein SCO3529 3896718 - 3896197 - | hypothetical protein SCO3530 3897241 - 3897840 + | hypothetical protein SCO3531 3897837 - 3898616 + | hypothetical protein SCO3532 3898613 - 3899089 + | hypothetical protein SCO3533 3899086 - 3899751 + | hypothetical protein SCO3534 3899823 - 3902345 + | large ATP-binding protein SCO3535 3902381 - 3904501 + | hypothetical protein TERM 1132 3904834 - 3904865 + T 93 -23.1 -2.98823 | opp_overlap 3904827 CGAGGACAGCTGCTT CCGGCATCGGGGC CCGTGA GCCCCGATGCCGG TCTCTATCCCCCGGC SCO3537 3906041 - 3904869 - | DNA-binding protein SCO3538 3906801 - 3906058 - | hypothetical protein SCO3539 3907269 - 3908108 + | transposase TERM 1133 3908337 - 3908293 - T 95 -13.6 -4.31692 | opp_overlap 3908300 AATGGATCATGAAAA CCACAAAGGCCCAGGTTAGA GGCTA TCTGTCCTGGGCCTTTTCGG AGCCGCCTTCGGGAT TERM 1134 3908300 - 3908330 + T 82 -13.3 -4.07687 | opp_overlap 3908293 CATGAAAACCACAAA GGCCCAGGTTAGA GGCTA TCTGTCCTGGGCC TTTTCGGAGCCGCCT SCO3540 3910139 - 3908520 - | proteinase (secreted protein) SCO3541 3911457 - 3910252 - | DNA polymerase III subunit delta' TERM 1135 3910744 - 3910768 + g 72 -14.2 -3.35679 | CGGCAGCTTCAGCAC GGCGGCCCGG CGGTC CCGGGCGGCC TTGTCGGTGGCCAGG SCO3542 3914879 - 3911610 - | integral membrane protein with kinase activity TERM 1136 3914447 - 3914397 - G 70 -14.1 -3.30771 | gap 2 GCACACCGTCCAGAA GCGCTCGGCGACC-CC-GGTGAC GAAGGCG GTCACCAGGAGGTAGGCGAGCGC GTCGTCGGGCGTCCA TERM 1137 3914644 - 3914627 - G 71 -6.9 -4.11216 | overlap 3914597 TGCGGACGCCGAAAA CGGTCGC CACT GCGAACG CCACGCCGCGGTAGC TERM 1138 3914796 - 3914767 - G 76 -11.4 -3.85698 | gap 1 TGTGCGCTCCACAAA CGCCTCAGCTGCG GGCGG CGCAGCAG-GGCG CGGACGGCGCGCTCG TERM 1139 3914968 - 3914932 - R 78 -18 -2.52464 | opp_overlap 3914932 GCCCGGCCGAACGTA CGCACGCCCCGACACC GAAAT GATGCCGGGGCGTTCG TTTTGCGAAGAGCGC TERM 1140 3914932 - 3914968 + r 85 -14.3 -4.07568 | opp_overlap 3914932 GCCCGGCCGAACGTA CGCACGCCCCGACACCG AAA TGATGCCGGGGCGTTCG TTTTGCGAAGAGCGC SCO3543 3917885 - 3915027 - | DNA topoisomerase I TERM 1141 3915116 - 3915142 + g 77 -15.8 -3.44284 | overlap 3915104 3915101 3915114 3915117 3915132 3915133 TGGCGGCGGTCTTCT TGGCCGCCGTGG TCT TCGCGGCGGCCG TCTTCTTGGTCGCCG TERM 1142 3915117 - 3915141 + g 70 -17.1 -2.66249 | overlap 3915104 3915101 3915116 3915114 3915132 3915133 GGCGGCGGTCTTCTT GGCCGCCGTGG TCT TCGCGGCGGCC GTCTTCTTGGTCGCC SCO3544 3918552 - 3918154 - | hypothetical protein TERM 1143 3918551 - 3918536 - G 90 -9 -4.65263 | ACGCGGGAAAAGAAA TGGGTG CGCG CACCCA CGCCCGGCGGCCGGG SCO3545 3920089 - 3918572 - | transferase SCO3546 3920767 - 3920177 - | small secreted protein TERM 1144 3920899 - 3920934 + r 89 -22.6 -2.52543 | opp_overlap 3920899 CGCGCGGGCGCGAAA CGGGCGGACGACGCGT CAAC ACGTGCCGTCCGCCCG TCCCTTGAGCGGCGT TERM 1145 3920934 - 3920899 - R 100 -22.6 -3.53012 | opp_overlap 3920899 CGCGCGGGCGCGAAA CGGGCGGACGACGCGT CAAC ACGTGCCGTCCGCCCG TCCCTTGAGCGGCGT hppA 3923371 - 3920987 - | membrane-bound proton-translocating pyrophosphatase TERM 1146 3923656 - 3923636 - R 91 -18.3 -3.59979 | TCCGCCCATGGCAAA GGGCCCCAC CAG GTGGGGCCC TCCGGGTGACACATG SCO3548 3924141 - 3923710 - | anti-sigma factor TERM 1147 3924172 - 3924205 + r 93 -18.1 -3.89572 | overlap 3924173 CTGCGGGCGTGCTTT CGAGGGTCCGGGCTG CCGA CAGCCCGGACCCCCC TTGTTCTACTTGCGT TERM 1148 3924173 - 3924204 + r 90 -21.6 -2.9302 | overlap 3924172 TGCGGGCGTGCTTTC GAGGGTCCGGGCTG CCGA CAGCCCGGACCCCC CTTGTTCTACTTGCG SCO3549 3924592 - 3924251 - | anti-sigma factor antagonist SCO3551 3927786 - 3927094 - | membrane spanning protein SCO3550 3924702 - 3927149 + | helicase SCO3552 3928235 - 3927783 - | hypothetical protein SCO3553 3928470 - 3928243 - | small membrane protein SCO3554 3929354 - 3928551 - | integral membrane protein SCO3555 3930316 - 3929351 - | integral membrane protein SCO3556 3931893 - 3930322 - | secretory protein SCO3557 3933089 - 3931899 - | septum site determining protein TERM 1149 3933499 - 3933460 - H 100 -25.8 -3.28712 | gap 1 CCGTGGTCGCGACAA CG-CCTGGGCCCCGCGCCG CAA CGGCACGGGGCCCAGATCG TGAGAAGTGCGGAAA TERM 1150 3934470 - 3934515 + G 76 -18.2 -2.87468 | gap 1 TGCCCCCGCGTCCCG CCCTCG-TCGCGGCCGCCGCG ATAGG CGCCGCGGCGGCGACCGCGGG TCTCGTCTGGTACGC SCO3558 3933752 - 3934558 + | morphological differentiation-associated protein TERM 1151 3934660 - 3934642 - T 76 -8.9 -4.20806 | opp_overlap 3934647, overlap 3934645 GACCGCAAAAGTAAA GAAGTGC GGCGA GCACTTC CGCTTACTCGGGACC TERM 1152 3934886 - 3934915 + T 82 -17.9 -3.27498 | overlap 3934887 CCGGGTGGTCATGCC AGCGGCGGTACGA GCAT TCGTACCGCCGCA TTCCTGTGGCGTCTG TERM 1153 3934887 - 3934914 + T 88 -21.4 -2.56177 | overlap 3934886 CGGGTGGTCATGCCA GCGGCGGTACGA GCAT TCGTACCGCCGC ATTCCTGTGGCGTCT SCO3559 3935802 - 3934978 - | oxidoreductase TERM 1154 3935400 - 3935434 + g 73 -14.8 -3.28712 | overlap 3935376 GTTCGTCCACCGGCT CGCCGTTCTGGCGGGG CCG CCCCACCTGGTCGGCG TTGTCCGCGGCCGCC TERM 1155 3936205 - 3936170 - g 71 -3.1 -4.43571 | gap 2, overlap 3936171 3936173 AGAAAATGATCAAAA CGACGCCGCCCGGCGAG GGCT CGCGCCTG-CTGCG-CG TGCGCGAGGACAACC TERM 1156 3936727 - 3936696 - g 73 -15 -3.29471 | overlap 3936692 CCTGGAGGAGACCAA CAGCCGGGCGCTGC GCAC GCTGCGCACGGCCG TCGACGCGACGTACG TERM 1157 3936824 - 3936857 + G 95 -19.6 -3.78775 | opp_overlap 3936819 GGGGCAACGAGCGCA CCGGGGACGACCTG GCGGCG CAGGTCGACCCCGG TTTCGTCCTCGGCGA SCO3560 3935905 - 3936894 + | ATP-binding protein SCO3561 3938241 - 3936946 - | secreted protein SCO3562 3938497 - 3940989 + | integral membrane transport protein SCO3563 3941251 - 3943206 + | acetyl-CoA synthetase SCO3564 3943390 - 3944814 + | sodium/proton antiporter SCO3565 3944949 - 3945437 + | integral membrane transport protein SCO3566 3945434 - 3946408 + | hydrolase SCO3567 3948008 - 3946803 - | serine protease SCO3568 3948797 - 3948054 - | hypothetical protein SCO3569 3949602 - 3948850 - | endonuclease TERM 1158 3949788 - 3949814 + G 70 -12.9 -3.38812 | overlap 3949773 3949786 GGCCGGCGGTCTTCC CGGCCGCGGTC TTCCT GGCCGCCGCCG TCTTCTTCGCCGCCG TERM 1159 3949984 - 3949996 + G 77 -9.1 -4.12911 | overlap 3949985 CGCAGTCACCCTCTT GGCAG GCA CTGCC TTCTTTGTCGCTTTC SCO3570 3949727 - 3950062 + | hypothetical protein SCO3571 3950326 - 3951000 + | transcriptional regulator SCO3572 3951855 - 3951085 - | hydrolase SCO3573 3952862 - 3951924 - | hypothetical protein SCO3574 3953985 - 3952921 - | epoxide hydrolase SCO3575 3954686 - 3954219 - | hypothetical protein SCO3576 3954844 - 3954683 - | hypothetical protein TERM 1160 3954902 - 3954944 + H 100 -24.9 -3.28712 | TGTCCGGGGGCCGTC CGCGGCCGCCGGCCGGC-CCC CGC GGGCGCCGGCCGG-GGCCACG TTGTCCACAGCCACC SCO3577 3954997 - 3955974 + | ion-transporting ATPase SCO3578 3955971 - 3957416 + | ion-transporting ATPase SCO3579 3957782 - 3957444 - | regulatory protein TERM 1161 3959548 - 3959514 - g 70 -13 -3.40403 | gap 1, overlap 3959529 3959532 GGCCCTGGAGGAGAA CGTACCGGCGACGAA GGAGTA CTCGTCGCCG-TACG ACATGGACTACCCGA SCO3580 3958243 - 3960513 + | transpeptidase TERM 1162 3960527 - 3960570 + T 100 -28.2 -3.03159 | GACCCGTTCCCTTCA CCGGTGAGGGCCCTCCCCGC GACT GCGGAGAGGGCCCTCACCCG TGTTGCCGGCGTTAC SCO3581 3961105 - 3960641 - | hypothetical protein TERM 1163 3960874 - 3960920 + g 83 -14.8 -3.65046 | TCTCCCGCTCGGCCT GCTCGGCGCGGCCGCCCTGGGC GAA GGCCTCGGCGGCCTCGCGGCGC TTCTTCGCCTCGCGG SCO3582 3961226 - 3962155 + | secreted protein SCO3583 3962279 - 3963043 + | integral membrane regulator TERM 1164 3963112 - 3963083 - T 71 -8.6 -4.05788 | gap 1, overlap 3963086 GTGGGCTAAAGTAAA CGAC-GTCGCCGC GACGA GCAGCGACAATCG GGGTGTGGCGCAGCT TERM 1165 3963243 - 3963192 - T 81 -18 -3.12668 | gap 1, opp_overlap 3963199, overlap 3963195 CACCCCGACAGTGAA GTACCAGGTCAGGGGCCTGATCCGC TTA GCGGGTCGGGCCCCTGAG-TGGTTC CGGGGGCAGGGGACA TERM 1166 3963240 - 3963195 - T 79 -18.3 -2.77182 | gap 1, opp_overlap 3963199, overlap 3963192 CCCGACAGTGAAGTA CCAGGTCAGGGGCCTGATCCGC TTA GCGGGTCGGGCCCCTGAG-TGG TTCCGGGGGCAGGGG TERM 1167 3963199 - 3963237 + T 93 -23.2 -2.70932 | opp_overlap 3963195 3963192 ACAGTGAAGTACCAG GTCAGGGGCCTGATCCGC TTA GCGGGTCGGGCCCCTGAG TGGTTCCGGGGGCAG SCO3584 3963576 - 3963217 - | hypothetical protein SCO3585 3963717 - 3964058 + | hypothetical protein SCO3586 3965133 - 3964141 - | integral membrane protein SCO3587 3965737 - 3965144 - | regulatory protein TERM 1168 3965668 - 3965678 + Gg 77 -2.4 -4.72272 | CCCGCACGGTGATCC GCGC CCA GCCC TTTTTCCTCCAGGCA SCO3588 3965649 - 3966812 + | hypothetical protein SCO3589 3967929 - 3966835 - | two component sensor kinase SCO3590 3968617 - 3967922 - | two-component system response regulator SCO3591 3968819 - 3968694 - | small membrane protein TERM 1169 3969405 - 3969383 - g 71 -10.4 -3.83026 | CTGGCGGACACCAAA CCGGCCGACG TCA CGATGGCCGG CAACCGAGCGCTGCG SCO3592 3968822 - 3969814 + | hypothetical protein SCO3593 3970005 - 3971198 + | hypothetical protein SCO3594 3971293 - 3972306 + | D-lactate dehydrogenase SCO3595 3972317 - 3973357 + | D-alanine:D-lactate ligase SCO3596 3973354 - 3973962 + | D-alanine:D-alanine dipeptidase SCO3597 3974824 - 3974012 - | hypothetical protein SCO3598 3975600 - 3974836 - | hypothetical protein SCO3599 3976808 - 3975852 - | hypothetical protein SCO3600 3976909 - 3977412 + | hypothetical protein SCO3601 3977529 - 3978014 + | hypothetical protein SCO3602 3979272 - 3978061 - | transmembrane transport protein TERM 1170 3978318 - 3978268 - G 76 -15.9 -3.38272 | GATGACGATCGAGAA CTCGCCGCGTGCCACCAGCGTGC CGCCC GCCCGCCAGCGGCCCGCGCCGCG CAGGCCGGCGCGGTG SCO3603 3981350 - 3979806 - | potassium/proton antiporter SCO3604 3981839 - 3981549 - | hypothetical protein SCO3605 3982106 - 3982402 + | hypothetical protein TERM 1171 3982443 - 3982463 + F 71 -14.7 -3.06796 | overlap 3982440 GCCCCCTGCCTTCCG CGTTGCCGG TTT CCGGCAGCG TTGACTACCCTCACG SCO3606 3982525 - 3983607 + | regulator SCO3607 3985146 - 3983677 - | secreted protein SCO3608 3985750 - 3985241 - | hypothetical protein TERM 1172 3985622 - 3985589 - G 78 -18.2 -3.05596 | overlap 3985607 GATGGCGCCACCGAA GCCGGTCATCGCCA CGAACC CGGCGACGACCGGC AGCGACAGCCACCCC SCO3609 3985984 - 3987855 + | hypothetical protein SCO3610 3989856 - 3988036 - | peptide hydrolase SCO3611 3989980 - 3990816 + | hypothetical protein SCO3612 3992276 - 3990912 - | hypothetical protein SCO3613 3992845 - 3992273 - | RNA polymerase sigma factor TERM 1173 3993204 - 3993166 - R 70 -13.1 -3.38046 | gap 1, opp_overlap 3993164, overlap 3993164 3993167 GGGTGACCGCAAAGA CGCTCCCCGCCACTCGCA CGGT TGCGGAGGGCGGGGAG-G AAATCCTCTGACGGA TERM 1174 3993296 - 3993307 + r 74 -7.2 -4.18401 | opp_overlap 3993292 3993295 ACAAACGAAACCCAC GGCC GCCG GGCC TTTTCGCCTCTCTGA SCO3614 3994418 - 3993330 - | aspartate-semialdehyde dehydrogenase TERM 1175 3994371 - 3994399 + g 88 -21.7 -3.10344 | GACGGCGAGCGTGGG CCGGCCGGTACGG CCG CCGTCCCGGCCGG TGTCTTGCCTGGCGG SCO3615 3995695 - 3994418 - | aspartate kinase TERM 1176 3995416 - 3995435 + g 90 -9.2 -4.72986 | opp_overlap 3995417, overlap 3995417 GGCTGCCGGTGAACG ACTGGGCC TCGT GGCCCAGG TTTTTGATCGCCATG TERM 1177 3995417 - 3995434 + g 70 -12.7 -3.4331 | opp_overlap 3995417, overlap 3995416 GCTGCCGGTGAACGA CTGGGCC TCGT GGCCCAG GTTTTTGATCGCCAT TERM 1178 3995581 - 3995600 + g 79 -11.4 -3.99494 | opp_overlap 3995581 3995578 CCATCGCGGAAACGA CGGCGACC ACCT GGTTGCCG TTCTTCTTCGCTTCC SCO3616 3995973 - 3996191 + | hypothetical protein SCO3617 3996935 - 3996276 - | hypothetical protein recR 3997527 - 3996928 - | recombination protein RecR TERM 1179 3996960 - 3996985 + g 74 -16.1 -3.05343 | GTCTCCCCTCGAAGG CGCGGCCGAGG GTCA CCTCGTCCGCG TATTCCAGGTCTCCG TERM 1180 3997619 - 3997609 - R 71 -8.2 -4.14392 | GGCGAACCGGGAAAA CCGG GGC CCGG GGAGACTCAGAACGG SCO3619 3997973 - 3997626 - | hypothetical protein TERM 1181 3998170 - 3998117 - H 80 -11.5 -4.07568 | CTTCCGGGCGGAAAA GCGACGGAACCCGGCCCTTCGCC ACCCATTG GGCGGTAGGAAGGGTTCCGGCGC GGGGTTCCGGCGTAC SCO3620 3998255 - 3999019 + | membrane protei SCO3621 4001437 - 3999086 - | serine-threonine protein kinase SCO3622 4001665 - 4003020 + | hypothetical protein SCO3623 4003147 - 4003848 + | transcriptional regulator TERM 1182 4003952 - 4003962 + G 71 -6.8 -4.16943 | ACCGCCGTGCTGTGT GAGG AGC CCTC TTTTGGCCTGTGACC SCO3624 4003950 - 4004615 + | hypothetical protein SCO3625 4004921 - 4004631 - | hypothetical protein SCO3626 4005844 - 4004960 - | RNA polymerase sigma factor SCO3627 4006160 - 4005960 - | hypothetical protein SCO3628 4006728 - 4006237 - | secreted protein SCO3629 4008183 - 4006900 - | adenylosuccinate synthetase TERM 1183 4008334 - 4008309 - H 79 -16.1 -3.37493 | opp_overlap 4008309, overlap 4008324 CCCGGAATAGACGAA GCCCCTGGCGC AACA GCGCAAGGGGC TCTTGCACAAAGATG TERM 1184 4008309 - 4008334 + H 75 -16.1 -3.01924 | opp_overlap 4008309 4008324 CCCGGAATAGACGAA GCCCCTGGCGC AACA GCGCAAGGGGC TCTTGCACAAAGATG SCO3630 4008369 - 4009274 + | hypothetical protein SCO3631 4009271 - 4009780 + | hypothetical protein SCO3632 4010251 - 4009793 - | hypothetical protein SCO3633 4010391 - 4011326 + | ABC transporter ATP-binding protein SCO3634 4011323 - 4012942 + | ABC transporter membrane-spanning protein SCO3635 4013696 - 4013295 - | hypothetical protein SCO3636 4015136 - 4013901 - | cytochrome P-450 hydroxylase SCO3637 4015264 - 4015701 + | hypothetical protein SCO3638 4016391 - 4015726 - | two-component system regulator SCO3639 4017806 - 4016388 - | two-component system sensor kinase SCO3640 4018506 - 4017820 - | two-component system regulator SCO3641 4019882 - 4018503 - | two-component system sensor kinase SCO3642 4021137 - 4019875 - | hypothetical protein SCO3643 4022119 - 4021130 - | hypothetical protein SCO3644 4023169 - 4022264 - | lipase/esterase TERM 1185 4023342 - 4023300 - R 84 -19.1 -2.71364 | TGAGGGCCGGAACGA CGCGTCCGGCCCC-GCCCGGC GAC GCGGGGCCGGGGCCGG-CGCC CCGGCCCCGGCCCCG SCO3645 4024598 - 4023366 - | hydrolase SCO3646 4025406 - 4024591 - | oxidoreductase TERM 1186 4025539 - 4025503 - R 76 -12.3 -3.73072 | gap 2, opp_overlap 4025509, overlap 4025504 AATCGTCGCAGGAAA CCGCAAGGCCCGCCCGC GCACG GCGGACGGGCCC-G-GG TGTGCCTGGTTCAGC SCO3647 4025981 - 4025550 - | hypothetical protein SCO3648 4027671 - 4026217 - | transmembrane efflux protein TERM 1187 4026970 - 4026946 - G 73 -14.9 -3.23216 | CTCGACGAGGACGAA GGCCACGGCGG CCA CCGCCCCGGCC ACCGCGCTGAGCGCC TERM 1188 4027717 - 4027687 - R 86 -19.7 -2.91264 | opp_overlap 4027678, overlap 4027656 GCCCCCAGGTATACA GCGAGCCCGGCGC GAAGG GCGCCGGGCTCGT GCGTACGGTCGTGTC SCO3649 4028773 - 4027742 - | fructose-bisphosphate aldolase pyrE 4029494 - 4028946 - | orotate phosphoribosyltransferase SCO3651 4030293 - 4029505 - | hypothetical protein SCO3652 4031294 - 4030362 - | hypothetical protein SCO3653 4032045 - 4031299 - | two-component system regulator SCO3654 4033367 - 4032042 - | two-component system sensor kinase SCO3655 4035120 - 4033456 - | spermidine synthase TERM 1189 4033664 - 4033618 - G 100 -28.7 -3.21099 | gap 1 CGCGGCCAGCAGGAA GCCCCAGCCGCG-GGGCGCGGG AGGG CCCGCGGCCGCGCGGCGGGGGC CGGGCACGGAGCCGG SCO3656 4035809 - 4035252 - | hypothetical protein SCO3657 4036406 - 4035996 - | hypothetical protein SCO3658 4036689 - 4037879 + | aminotransferase TERM 1190 4037951 - 4037914 - T 100 -34.3 -2.52543 | overlap 4037918 AGCCGTGGGAAGTGA GAGAGCCCGGCCCCCGC GGCA GCGGGGGCCGGGCTCTC CGGAGTGGTGCCGCG TERM 1191 4037947 - 4037918 - T 100 -27.9 -2.94912 | overlap 4037914 GTGGGAAGTGAGAGA GCCCGGCCCCCGC GGCA GCGGGGGCCGGGC TCTCCGGAGTGGTGC SCO3659 4038511 - 4037975 - | hypothetical protein SCO3660 4040280 - 4038637 - | hypothetical protein TERM 1192 4039040 - 4039020 - G 70 -12.5 -3.41745 | GGGTGAGAACAGCAA CGGCAGCCG GTG CGGTTGCCG TCCCGATGGCGACGG SCO3661 4043047 - 4040450 - | ATP-dependent protease ATP-binding subunit SCO3662 4043665 - 4043330 - | hypothetical protein SCO3663 4043858 - 4043667 - | hypothetical protein SCO3664 4043991 - 4045001 + | regulatory protein TERM 1193 4045921 - 4045898 - g 72 -12.4 -3.59262 | GTCCACATCGCCAAA CTCGCCGCCA CCCT CGGCAGCGAG AGCCGCGCTCAGCTC SCO3665 4044998 - 4045981 + | regulatory protein SCO3666 4047128 - 4045944 - | regulatory protein SCO3667 4048256 - 4047138 - | secreted solute-binding protein TERM 1194 4048379 - 4048431 + r 90 -16.3 -3.80625 | gap 1, opp_overlap 4048378, overlap 4048416 CCAATGAGACAGCAC CGTTGTGAATCGGCCCCGGAGGAC GCGGTG GTCCTCCGGGGCCGGTGC-TGCCG TTTCCCTTGTGCCGA SCO3668 4048915 - 4048460 - | heat shock protein SCO3669 4050120 - 4048921 - | molecular chaperone SCO3670 4050840 - 4050163 - | heat chock protein dnaK 4052693 - 4050837 - | molecular chaperone DnaK SCO3672 4054024 - 4052789 - | cell surface biosynthesis associated protein SCO3673 4054268 - 4056550 + | iron-sulphur-binding reductase TERM 1195 4056567 - 4056610 + F 93 -23.3 -2.87344 | gap 1 CGCCGCTCACCCGCT CGACCGACACCCCCGGGTTC CGTCC GAACCCGGGGGTGTCGC-CG TATGTCGAACGCGTG SCO3674 4056685 - 4057986 + | sensor kinase SCO3675 4058105 - 4059337 + | hypothetical protein SCO3676 4059415 - 4060467 + | integral membrane protein SCO3677 4061044 - 4060547 - | purine phosphoribosyltransferase dcd 4061654 - 4061079 - | deoxycytidine triphosphate deaminase TERM 1196 4061711 - 4061672 - H 93 -22.8 -3.14647 | overlap 4061692 ACCGAGGATACGCAA GACGCGCGGAGCAGCGAC AACC GCCGCCGCACCGCGCGCC CGAACCCGCTCTGCG TERM 1197 4062242 - 4062270 + H 95 -15.3 -4.41114 | opp_overlap 4062245, overlap 4062245 CACCCGCTCCATGCG AAACCCCCAGGCC ATT GGCTTGGGGGTTG TTTGTTGTCTAGTCC TERM 1198 4062267 - 4062245 - H 82 -14.8 -3.59979 | opp_overlap 4062242 4062245 CCGCTCCATGCGAAA CCCCCAGGCC ATT GGCTTGGGGG TTGTTTGTTGTCTAG TERM 1199 4062245 - 4062267 + H 95 -17 -4.30793 | opp_overlap 4062245, overlap 4062242 CCGCTCCATGCGAAA CCCCCAGGCC ATT GGCTTGGGGG TTGTTTGTTGTCTAG SCO3679 4062587 - 4064491 + | hypothetical protein SCO3680 4064868 - 4064575 - | hypothetical protein SCO3681 4064888 - 4065388 + | hypothetical protein SCO3682 4065489 - 4066526 + | delta fatty acid desaturase SCO3683 4066798 - 4066523 - | secreted protein SCO3684 4067394 - 4066804 - | hypothetical protein SCO3685 4067767 - 4068168 + | hypothetical protein SCO3686 4068669 - 4068136 - | hypothetical protein SCO3687 4069088 - 4069687 + | hypothetical protein SCO3688 4069691 - 4070653 + | hypothetical protein TERM 1200 4070885 - 4070931 + TF 81 -18.7 -2.52464 | TGCGATGCGTGCGGT GATCGGGAGTGATCCTCCGGG CGGGA CCCGGAGGATCACCCCGGGGC TCGGTTCCGAACCCG SCO3689 4071573 - 4071163 - | hypothetical protein SCO3690 4071572 - 4072381 + | hydrolase TERM 1201 4072804 - 4072767 - g 81 -4.8 -4.62471 | CTCAACGGTGAAAAA CGGCGACGACGG-GCAGC CACT GCTGATCCG-CACCACCG TCCTCGACGCCCGCG SCO3691 4072381 - 4073649 + | regulatory protein SCO3692 4073646 - 4074005 + | anti-sigma factor antagonist TERM 1202 4074132 - 4074156 + F 70 -14.9 -2.88783 | opp_overlap 4074130, overlap 4074130 CCCGCTCCACGAAGG GGGCCCGGGTC ACC GGCCGGGGCCC TACTTGTCGTCTCTC SCO3693 4074209 - 4074751 + | hypothetical protein SCO3694 4075130 - 4074756 - | transcriptional regulator TERM 1203 4074992 - 4074978 - G 90 -11.4 -4.56597 | GCCCGCCGCCAAAAA CGCCTG CAC CAGGCG CACCCGCTGGACGTG SCO3695 4075605 - 4075117 - | secreted protein TERM 1204 4075686 - 4075710 + rH 70 -2.2 -4.53036 | gap 2, overlap 4075691 4075692 GGGTGCGTGCGATGC CGACGCGAGCTG CCT CAGCTC-C-TTG TTTTGATATTTGTCG TERM 1205 4075691 - 4075707 + rH 73 -6.5 -4.34993 | overlap 4075686 4075692 CGTGCGATGCCGACG CGAGCTG CCT CAGCTCC TTGTTTTGATATTTG SCO3697 4077469 - 4076249 - | oxidoreductase SCO3696 4075938 - 4076306 + | transcriptional regulator SCO3698 4078692 - 4077583 - | heavy metal resistance membrane protein SCO3699 4078997 - 4078689 - | transcriptional regulator SCO3700 4079089 - 4079502 + | heavy metal reductase SCO3701 4079499 - 4079729 + | hypothetical protein SCO3702 4079863 - 4080510 + | DNA-binding protein SCO3703 4080650 - 4081045 + | substrate binding protein SCO3704 4081222 - 4082031 + | substrate-binding transport protein SCO3705 4082028 - 4082879 + | ABC transporter membrane subunit SCO3706 4082876 - 4084000 + | ABC transporter ATP-binding subunit SCO3707 4084604 - 4084035 - | lipoprotein SCO3708 4085324 - 4084704 - | integral membrane protein SCO3709 4085871 - 4085317 - | ECF sigma factor TERM 1206 4086527 - 4086558 + G 70 -13.6 -3.20573 | gap 1, overlap 4086524 CGCCGTCATCTCCAG GCGGACC-GCGGGGC GGG GCGCCGCCGGGCCGC TGTTCCTGTGCCTGC SCO3710 4086039 - 4087673 + | large integral membrane protein SCO3711 4087742 - 4088053 + | small membrane protein SCO3712 4088148 - 4088984 + | hydrolase SCO3713 4089171 - 4088998 - | hypothetical protein TERM 1207 4089233 - 4089254 + r 79 -15.9 -3.36492 | opp_overlap 4089228 GTTGAATTGACTAGC TCCTCGGGC TGAA GCCCGAGGA TTCTGGCCTTCCCGG TERM 1208 4089258 - 4089315 + r 88 -21.3 -2.62372 | gap 1, opp_overlap 4089228, overlap 4089275 4089291 4089306 4089307 GAAGCCCGAGGATTC TGGCCTTCCCGGCAGAGTTCCGTGCCGC TAC GCGGCACGGGGTTCGGTCGGGA-GTCCG TGGCTTCCTGTTTCT TERM 1209 4089275 - 4089299 + r 75 -15.7 -3.05816 | overlap 4089258 4089291 GCCTTCCCGGCAGAG TTCCGTGCCGC TAC GCGGCACGGGG TTCGGTCGGGAGTCC SCO3714 4090508 - 4089285 - | transposase SCO3715 4091067 - 4090396 - | ECF sigma factor SCO3716 4091944 - 4091267 - | cation transport system component SCO3717 4094073 - 4091950 - | potassium-transporting ATPase subunit B SCO3718 4095734 - 4094070 - | potassium-transporting ATPase subunit A SCO3719 4095831 - 4095742 - | small membrane protein SCO3720 4095911 - 4095828 - | small membrane protein SCO3721 4096780 - 4096157 - | carbonic anhydrase TERM 1210 4096254 - 4096302 + g 72 -16 -2.82516 | gap 1 CCGGCGGCCACCTCG TTCGCCAGCAGCGCCGAGCGGCT CACC AGCCCGTCGACGCTGC-GGCGGA TGTGCTCGTCCACGA SCO3722 4097198 - 4096845 - | transcriptional regulator TERM 1211 4097360 - 4097326 - H 71 -16.4 -2.53263 | opp_overlap 4097325, overlap 4097336 GCCAGGCCGAATCCA CCGGGACGAACCCGGT CGC ACCGGGTCGGTGCCGG GTTACTCCGACCGGC SCO3723 4097454 - 4098950 + | regulatory protein SCO3724 4099468 - 4098986 - | hypothetical protein TERM 1212 4099456 - 4099431 - G 86 -16.1 -3.63627 | TCTCCACAGGGGAAA CCGGTCCGCGG CTGC CCGCGGACCCG GGGCCCCAGCATCCA SCO3725 4100809 - 4099520 - | hypothetical protein SCO3726 4101508 - 4100888 - | hypothetical protein SCO3727 4101639 - 4102223 + | stress response protein SCO3728 4103080 - 4102349 - | hypothetical protein SCO3729 4103970 - 4103188 - | regulatory protein SCO3730 4104198 - 4105055 + | oxidoreductase SCO3731 4105340 - 4105543 + | cold-shock protein TERM 1213 4105557 - 4105604 + F 100 -30.1 -3.53012 | gap 2 GACGCTCACGCACAC CGC-GC-AGCTGGGGCCCGCACC TAGG GGTGCGGGCCCCAGCTCGCCGCG TTTCCGGGCGCACGC SCO3732 4105819 - 4107405 + | DEAD-box RNA helicase SCO3733 4107493 - 4107822 + | hypothetical protein SCO3734 4108183 - 4107830 - | hypothetical protein SCO3735 4108686 - 4108183 - | secreted protein SCO3736 4109227 - 4108736 - | RNA polymerase ECF sigma factor SCO3737 4109905 - 4109279 - | lipoprotein SCO3738 4110471 - 4109902 - | integral membrane protein TERM 1214 4110524 - 4110536 + G 71 -10.5 -3.74693 | TGCGCGTACTGGTCA CCGGC AGC GCCGG TTTCATCGGGTCCCA SCO3739 4110508 - 4111512 + | epimerase SCO3740 4112645 - 4111533 - | histidine kinase SCO3741 4113418 - 4112648 - | response regulator SCO3742 4113665 - 4114393 + | glycosyltransferase SCO3743 4114390 - 4115031 + | hypothetical protein SCO3745 4116157 - 4115666 - | lipoprotein SCO3744 4115028 - 4115813 + | hypothetical protein SCO3746 4117440 - 4116154 - | hypothetical protein TERM 1215 4118089 - 4118129 + G 71 -15.9 -3.15544 | TGCTGGTCGCGGTGC GGGCCCTGACCGGCGAGCG GCT CGCCCGGCGGGCGGCGCCC TTCCTGGCCCTGGCA SCO3747 4117506 - 4118876 + | integral membrane protein TERM 1216 4118921 - 4118880 - T 85 -18.7 -3.01791 | opp_overlap 4118918, overlap 4118882 ACCGGCTGGTGAATA CACGCGAAGGGCCCGCACC GTGC GGTGCGGGCCCTCGACACG TACTGCGCGACTACC TERM 1217 4118919 - 4118882 - T 81 -17.7 -3.06696 | opp_overlap 4118918, overlap 4118880 CGGCTGGTGAATACA CGCGAAGGGCCCGCACC GTGC GGTGCGGGCCCTCGACA CGTACTGCGCGACTA SCO3748 4119160 - 4118957 - | cold shock protein SCO3749 4120066 - 4119416 - | integral membrane protein SCO3750 4121462 - 4120212 - | two-component sensor histidine kinase SCO3751 4121664 - 4121933 + | hypothetical protein SCO3752 4121930 - 4122688 + | ABC transporter ATP-binding protein SCO3753 4122691 - 4125243 + | integral membrane SCO3754 4127978 - 4125465 - | ABC transporter integral membrane subunit SCO3755 4128769 - 4127975 - | ABC transport system ATP binding protein TERM 1218 4128969 - 4128949 - R 70 -13.9 -3.27298 | opp_overlap 4128962 GGGGCGAAGGAGGAA GGCCGGGCC GCG GGACCGGCC GGGCGGGACTACTCT SCO3756 4129652 - 4128978 - | two component system response regulator SCO3757 4130995 - 4129649 - | two component system sensor kinase SCO3758 4132060 - 4131008 - | fatty acid desaturase SCO3759 4133346 - 4132135 - | integral membrane protein SCO3760 4134332 - 4133355 - | secreted protein SCO3761 4134996 - 4134484 - | hypothetical protein SCO3762 4135273 - 4135076 - | hypothetical protein SCO3763 4137522 - 4135438 - | hypothetical protein TERM 1219 4137679 - 4137707 + r 76 -17.4 -2.73875 | opp_overlap 4137679, overlap 4137676 TGGAAGGGAACGGAA CGCGGCCGACCG GGGGG CGATCGGCCGCG TCGTGTTACGACGCC TERM 1220 4137707 - 4137679 - R 86 -19.6 -3.20991 | opp_overlap 4137679 4137676 TGGAAGGGAACGGAA CGCGGCCGACCG GGGGG CGATCGGCCGCG TCGTGTTACGACGCC SCO3764 4138738 - 4137713 - | integral membrane protein TERM 1221 4138331 - 4138364 + g 79 -14.5 -3.63991 | overlap 4138321 4138334 CGGCGGGCCGAGGAG CAGCGCGGTGGTCGC CGGG GCGGCCAGCGCGATG TTCTTCGGGATCATC SCO3765 4140114 - 4138735 - | integral membrane protein SCO3766 4140307 - 4141329 + | hypothetical protein SCO3767 4141437 - 4141892 + | hypothetical protein SCO3768 4141996 - 4142244 + | translocase protein SCO3769 4142994 - 4142257 - | tetR family transcriptional regulatory protein TERM 1222 4142968 - 4142931 - G 72 -14.7 -3.40403 | gap 1 CCGCCTCCAGCAGAA GCTCCCGGTTGCGCCGCG CGT CGCGTCGCTGCCGGG-GC GCTCCGTCGCGTGCG SCO3770 4143070 - 4144254 + | cytochrome P450 oxidoreductase SCO3771 4145912 - 4144272 - | secreted penicillin binding protein SCO3772 4146976 - 4145930 - | secreted protein SCO3773 4147062 - 4148024 + | LysR family transcriptional regulator SCO3774 4148686 - 4149564 + | beta-lactamase related protein SCO3775 4151322 - 4149589 - | hypothetical protein SCO3776 4151301 - 4151843 + | hypothetical protein SCO3777 4151848 - 4152975 + | peptidase TERM 1223 4153149 - 4153111 - f 100 -21.1 -3.4072 | gap 1, opp_overlap 4153118 GACTGCTGACCAGAA GT-CCGAAGCCCCGGGGC GAGC GCCCCGGGGCTTCGTCAC GTGGTGCTCGTCCCG TERM 1224 4153118 - 4153141 + F 93 -21 -3.17212 | opp_overlap 4153111 GACCAGAAGTCCGAA GCCCCGGGGC GAGC GCCCCGGGGC TTCGTCACGTGGTGC SCO3778 4153150 - 4154442 + | threonyl tRNA synthetase SCO3779 4154591 - 4155571 + | nucleoside hydrolase TERM 1225 4157281 - 4157244 - g 71 -15.6 -3.14132 | GCGCTGCGTCACCAA CCTCTCCGGCACGGC-GG TGGA CCTGCCG-GCCGGCGAGG TGCTGCTCAGCAGCG SCO3780 4155682 - 4157352 + | sugar hydrolase SCO3781 4157484 - 4158338 + | secreted protein TERM 1226 4158533 - 4158512 - T 90 -15.9 -3.76373 | opp_overlap 4158518 CCGGCAAGATCCAAA CGACACCCC CCAG GGGGTGTCG TCCTGGCACCGCGCC SCO3782 4159929 - 4158580 - | regulatory protein SCO3783 4160042 - 4160218 + | lipoprotein SCO3784 4161347 - 4160268 - | hypothetical protein SCO3785 4162660 - 4161431 - | integral membrane protein SCO3786 4162785 - 4163303 + | integral membrane protein SCO3787 4163376 - 4164320 + | integral membrane protein SCO3788 4164327 - 4164737 + | hypothetical protein SCO3789 4164773 - 4165789 + | integral membrane protein SCO3790 4167894 - 4165816 - | hypothetical protein TERM 1227 4168482 - 4168451 - g 73 -15.8 -3.1994 | overlap 4168469 4168470 GACACCACCCACGAA CCCCGAGCCCGAGG CAAA CCCCGAGCCCGAGG TCGCCCCCGAGGCAA SCO3791 4168158 - 4169495 + | hypothetical protein SCO3792 4169611 - 4171227 + | methionyl-tRNA synthetase TERM 1228 4171240 - 4171283 + F 100 -30.4 -3.54741 | opp_overlap 4171215, overlap 4171241 TAACGCGCTCGCTAC AGCGGAGGCCCGGGAGAGGC AGAA GCTTCTCCCGGGCCTCCGCG TTTGCGAAGATCGTA TERM 1229 4171241 - 4171282 + F 100 -33.9 -2.7263 | opp_overlap 4171215, overlap 4171240 AACGCGCTCGCTACA GCGGAGGCCCGGGAGAGGC AGAA GCTTCTCCCGGGCCTCCGC GTTTGCGAAGATCGT SCO3793 4171328 - 4171693 + | hypothetical protein SCO3794 4172662 - 4171889 - | glycosyl transferase aspS 4174510 - 4172747 - | aspartyl-tRNA synthetase TERM 1230 4174219 - 4174259 + g 73 -14.8 -3.28712 | gap 1, overlap 4174221 4174225 GCTCGACCTCGCCCA CCTCGACCTCGACCTCGCC GGTG GGC-AGGTCGGGGTTGATG TTGTCGGCGCCGCGG TERM 1231 4174221 - 4174257 + g 77 -16 -3.21276 | gap 1, overlap 4174219 4174225 TCGACCTCGCCCACC TCGACCTCGACCTCGCC GGTG GGC-AGGTCGGGGTTGA TGTTGTCGGCGCCGC TERM 1232 4174225 - 4174253 + g 70 -13.2 -3.41745 | gap 1, overlap 4174221 4174219 CCTCGCCCACCTCGA CCTCGACCTCGCC GGTG GGC-AGGTCGGGG TTGATGTTGTCGGCG SCO3797 4177901 - 4176813 - | integral membrane protein SCO3796 4174717 - 4176885 + | hypothetical protein SCO3798 4178944 - 4177967 - | chromosome condensation protein TERM 1233 4179045 - 4179012 - R 72 -16 -2.72344 | opp_overlap 4179008, overlap 4179017 TGCCACCTGGAACCA CGAAAGCCCGGAGG TCATTC CCTCCGGGCTCACG GGCATCCGTTCGGCG TERM 1234 4179040 - 4179017 - R 85 -15.3 -3.84246 | opp_overlap 4179008, overlap 4179012 CCTGGAACCACGAAA GCCCGGAGG TCATTC CCTCCGGGC TCACGGGCATCCGTT SCO3799 4179535 - 4179065 - | hypothetical protein SCO3800 4179684 - 4181510 + | acyl-CoA dehydrogenase SCO3801 4181609 - 4182907 + | putative aminopeptidase 2 SCO3802 4183022 - 4183273 + | hypothetical protein SCO3803 4183737 - 4183333 - | hypothetical protein SCO3804 4183789 - 4184793 + | AraC family transcription regulator TERM 1235 4185104 - 4185147 + G 89 -23.2 -2.62263 | opp_overlap 4185100 CAGCGGCAAGATCCT CGACCGGGAGTTCGCCGTCG AGTA CGACGGCGAACTGCTGGCCG TCGTCTCCCGGCGGT SCO3805 4184790 - 4185284 + | hypothetical protein SCO3806 4185765 - 4185307 - | hypothetical protein SCO3807 4186627 - 4185833 - | hydrolase SCO3808 4186809 - 4187633 + | hypothetical protein SCO3809 4189068 - 4187758 - | transmembrane transport protein SCO3810 4189715 - 4189065 - | GntR family transcriptional regulator TERM 1236 4190782 - 4190733 - g 73 -16.4 -3.02144 | gap 1, overlap 4190758 CGATCGGCGTGAAGA CCGGGTCGGGGCCGGAGGCCAAG TACTG CCTGGTCTTCG-CCGCGACCCGG AAGGGGAAGACGGTG SCO3811 4189937 - 4190881 + | D-alanyl-D-alanine carboxypeptidase TERM 1237 4190933 - 4190908 - f 93 -21.9 -3.15544 | overlap 4190882 CCGCACCGCCACGAA GGGCCCGTCGC CGAC GCGACGGGCCC TTCAGCTCGTGCTGC SCO3812 4190999 - 4191346 + | GntR family transcriptional regulator SCO3813 4191343 - 4192329 + | hypothetical protein TERM 1238 4192375 - 4192333 - f 75 -16.3 -3.01791 | gap 2, opp_overlap 4192328 4192337, overlap 4192335 ACCCGGGGCTGAACA CAGCGG-CCCCG-GGGGCCTG TTA CACGCCCCTCGGGGACCACCG CAGCTCTTTCGATCA TERM 1239 4192373 - 4192335 - f 71 -15.3 -3.06696 | gap 2, opp_overlap 4192328 4192337, overlap 4192333 CCGGGGCTGAACACA GCGG-CCCCG-GGGGCCTG TTA CACGCCCCTCGGGGACCAC CGCAGCTCTTTCGAT SCO3814 4192477 - 4193454 + | DNA-binding protein TERM 1240 4193503 - 4193469 - T 91 -17.2 -3.79113 | AGCCCGGCACAACAA GAGGGGCGTCGCAA CTCGAGC TTGCGGCGCCCCTC CGTCGTGAAGGTACC SCO3815 4194941 - 4193532 - | branched-chain alpha-keto acid dehydrogenase subunit E2 SCO3816 4195941 - 4194961 - | branched-chain alpha keto acid dehydrogenase E1 beta subunit SCO3817 4197196 - 4195943 - | branched-chain alpha keto acid dehydrogenase E1 alpha subunit TERM 1241 4198122 - 4198086 - g 81 -13.7 -3.77553 | opp_overlap 4198121 GAAGACGATCAAGAA CTACGTGTCGAGCCTGC TGG GCAAGCTCGGCATGCAG CGGCGTTCCCAGGCC SCO3818 4197520 - 4198176 + | two-component system response transcriptional regulator SCO3819 4198301 - 4198708 + | hypothetical protein SCO3820 4200363 - 4198795 - | serine/threonine protein kinase SCO3821 4200767 - 4202437 + | serine/threonine protein kinase SCO3822 4203092 - 4202553 - | hypothetical protein TERM 1242 4203594 - 4203549 - R 76 -16.2 -3.14132 | CGGGGCGGTCACGAA CGTCCCCGGCGCCCCG-ACGGC CACG ACCGTACGGAGCGCCCGG-ACG CCGGATCCGCCTCCC SCO3823 4205081 - 4204101 - | quinone oxidoreductase SCO3824 4205224 - 4206252 + | ABC-transporter ATP-binding component TERM 1243 4206702 - 4206743 + G 71 -15.1 -3.15861 | gap 1, overlap 4206729 GCGTCCGTCGTGATG CTCTCCGTCGGGCTGCT-GC TCG GCTACCGGCCCGACGGCGGG TTCGTCGGCGTGGTC SCO3825 4206249 - 4207097 + | ABC-transporter transmembrane component SCO3826 4208267 - 4207170 - | ion channel membrane protein SCO3827 4209661 - 4208264 - | molybdenum cofactor biosynthesis protein SCO3828 4210572 - 4209661 - | molybdopterin-guanine dinucleotide biosynthesis protein TERM 1244 4210488 - 4210527 + g 76 -12.1 -3.85698 | opp_overlap 4210502 CGCAGGCGGCGAGCA CCCGGTC-GAGGAGAGGGC GGCC GCCCAC-CCGCAGACCGGG TTTGTCCGCGCCCCC SCO3829 4212271 - 4210796 - | branched-chain alpha-keto acid dehydrogenase subunit E2 SCO3830 4213275 - 4212271 - | branched-chain alpha keto acid dehydrogenase E1 beta subunit SCO3831 4214438 - 4213272 - | E1-alpha branched-chain alpha keto acid dehydrogenase TERM 1245 4214679 - 4214630 - H 95 -15.6 -4.1822 | overlap 4214631 TGGCATCTGAACAAA TGGC-CGACCGGGCCGATCGCCCC GGGG AGGGCGG-CGGCCCGGACGAGCCC GGCGCCCCGCCGCCT TERM 1246 4214678 - 4214631 - H 85 -19.1 -3.10611 | overlap 4214630 GGCATCTGAACAAAT GGC-CGACCGGGCCGATCGCCCC GGGG AGGGCGG-CGGCCCGGACGAGCC CGGCGCCCCGCCGCC SCO3832 4214734 - 4215141 + | transcriptional regulator SCO3833 4215806 - 4215177 - | transcriptional regulator SCO3834 4217317 - 4215803 - | 3-hydroxybutyryl-CoA dehydrogenase TERM 1247 4216933 - 4216901 - G 74 -16.2 -3.15544 | overlap 4216887 GTGCAGGCCCACGAA GCGGCCGGGGACGC GCAGT GCGCCGCCGACCGC GGTGACGGACAGGGA SCO3835 4217476 - 4219167 + | dehydrogenase SCO3836 4219963 - 4219178 - | rRNA methylase SCO3837 4221270 - 4219960 - | hypothetical protein SCO3838 4222505 - 4221267 - | hypothetical protein SCO3839 4222852 - 4222523 - | hypothetical protein SCO3840 4223718 - 4222903 - | hypothetical protein SCO3841 4225387 - 4223858 - | hypothetical protein SCO3842 4225790 - 4226674 + | dioxygenase SCO3843 4227374 - 4228246 + | hypothetical protein SCO3844 4228257 - 4228775 + | secreted protein SCO3845 4228917 - 4230464 + | protein phosphatase SCO3846 4230492 - 4231931 + | FtsW/RodA/SpoVE family cell cycle protein TERM 1248 4231942 - 4231955 + G 73 -5.2 -4.37886 | CGTGAACAAGCCACT GCGC CGAATC GCGC TTTTCTGCGGCCTCC SCO3847 4231928 - 4233400 + | secreted penicillin-binding protein TERM 1249 4233453 - 4233397 - f 91 -17.4 -3.78034 | gap 1, overlap 4233413 CATCGACAGCAAGAA GTGACCGCGCCATGAAGGGGACGTGAC TCCG GTCACGTCCCCTTCACATCGGCG-CAC GTTGCGATACCGGTC TERM 1250 4233438 - 4233413 - f 86 -19.1 -3.14564 | overlap 4233397 TGACCGCGCCATGAA GGGGACGTGAC TCCG GTCACGTCCCC TTCACATCGGCGCAC SCO3848 4233591 - 4235612 + | serine/threonine protein kinase TERM 1251 4235631 - 4235673 + T 100 -39.4 -2.64616 | GCCTGCCCGACCGAC CGGAGCCCCGGTCCCTCAGC CGA GCTGAGGGACCGGGGCTCCG TCGTGTACGTCAGGA SCO3849 4236452 - 4235691 - | integral membrane protein SCO3850 4237524 - 4236466 - | integral membrane protein TERM 1252 4237479 - 4237442 - G 76 -18.5 -2.52464 | CCGCCCCCGAACGCA CCGGAATCCCCGTACGG CTGT CCGTACGAGGATCCCTG GTCACCGGCCGTGCC SCO3851 4238159 - 4237521 - | para-aminobenzoate synthase component II SCO3852 4238365 - 4238156 - | hypothetical protein SCO3853 4239112 - 4238399 - | hypothetical protein SCO3854 4239330 - 4239584 + | putative septation inhibitor protein TERM 1253 4239799 - 4239744 - T 80 -11.4 -4.08767 | opp_overlap 4239744 4239748 CCCAGCTTCCGAAAA CATGTTCGCCCCCTG-C-CTGACCTGCG ATAA CACTGGTCAGCGACAGGGGGC--ACATG TGTTCCCGCACGCTG SCO3855 4240745 - 4239852 - | hypothetical protein TERM 1254 4240795 - 4240821 + r 81 -13 -3.95584 | overlap 4240769 GCAGATGCACCGCCC CGCCCTGCTC TACGGAT GAGCGGGGCG TTTGGTTCCTGCCCG SCO3856 4241383 - 4240850 - | peptidyl-prolyl cis-trans isomerase SCO3857 4241704 - 4242402 + | regulatory protein TERM 1255 4242447 - 4242493 + T 100 -25.9 -3.59979 | overlap 4242449 4242450 CTTCTGTCGTTTCGT TACCGCCGCGGGGCGGGAGAC CGTAA GTCTCCCGCCCCGCGTCGATG TTTCACGTGAAACGG TERM 1256 4242449 - 4242491 + T 100 -26.3 -3.38046 | overlap 4242447 4242450 TCTGTCGTTTCGTTA CCGCCGCGGGGCGGGAGAC CGTAA GTCTCCCGCCCCGCGTCGA TGTTTCACGTGAAAC TERM 1257 4242450 - 4242490 + T 100 -29.8 -2.62613 | overlap 4242449 4242447 CTGTCGTTTCGTTAC CGCCGCGGGGCGGGAGAC CGTAA GTCTCCCGCCCCGCGTCG ATGTTTCACGTGAAA SCO3858 4243288 - 4242512 - | hypothetical protein TERM 1258 4243679 - 4243636 - H 93 -21.8 -3.17075 | opp_overlap 4243633 4243640, overlap 4243638 CCCGCCGGAAGCGAA CAGAGCGCCTCCGATCTACG TTTC CGCAGGTCGGAGGCGCTCTT GACGGTGGAGCCTAG TERM 1259 4243677 - 4243638 - H 100 -24.4 -3.14878 | opp_overlap 4243633 4243640, overlap 4243636 CGCCGGAAGCGAACA GAGCGCCTCCGATCTACG TTTC CGCAGGTCGGAGGCGCTC TTGACGGTGGAGCCT TERM 1260 4243640 - 4243675 + H 93 -21.2 -3.04144 | opp_overlap 4243638 4243636, overlap 4243633 CCGGAAGCGAACAGA GCGCCTCCGATCTACG TTTC CGCAGGTCGGAGGCGC TCTTGACGGTGGAGC TERM 1261 4243885 - 4243910 + H 79 -7.5 -4.56597 | overlap 4243864 4243886 TCCGTAAGATGCTCG GCGTGGTTCGC TGGA GCGAACTGCGG TTTTTGGGGAAGCGA SCO3859 4243938 - 4244486 + | DNA-binding protein TERM 1262 4244537 - 4244483 - f 75 -14.7 -3.41051 | overlap 4244487 CCAGTCCCACCAGAA CTGACCCCGCGGGTCCGGTCGCCGA GGGGG TCGGCGGCCGGGCCCGAGGGAGTGG CGCGACAGGTCCCAG TERM 1263 4244533 - 4244487 - f 93 -22.9 -2.61548 | overlap 4244483 TCCCACCAGAACTGA CCCCGCGGGTCCGGTCGCCGA GGGGG TCGGCGGCCGGGCCCGAGGGA GTGGCGCGACAGGTC SCO3860 4244573 - 4246303 + | serine/threonine protein kinase SCO3861 4247670 - 4246345 - | hypothetical protein TERM 1264 4247771 - 4247749 - R 100 -17 -4.67608 | opp_overlap 4247749 CAGGGCAACACAAAA CCCCGACCGT TTG ACGGCCGGGG TCTGCTCAGGACCGG SCO3862 4248081 - 4247800 - | hypothetical protein SCO3863 4248267 - 4248656 + | secreted protein TERM 1265 4248752 - 4248721 - f 100 -25.2 -3.91412 | overlap 4248741 4248744 ACCACACGCGAGAAA CGGCCCGGCCGCTC GACA GAGCAGCCGGGCCG CCGCCGTACCCGGCT SCO3864 4248804 - 4249592 + | transcriptional regulator SCO3865 4249601 - 4250383 + | hypothetical protein SCO3866 4251389 - 4250514 - | hypothetical protein SCO3867 4251661 - 4251449 - | ferredoxin SCO3868 4251867 - 4252493 + | hypothetical protein TERM 1266 4256453 - 4256408 - g 70 -12.6 -3.44051 | gap 3, overlap 4256409 CGGCGACGACGACAA GGTCCGGCTCTGGGACGTGAGCG ATC CCCGC-CGTCCC-GAGCCGG-CC GGCGCACCGCTGGCC SCO3869 4252857 - 4257887 + | WD-40 repeat-containing protein TERM 1267 4257986 - 4258026 + T 100 -17.7 -4.2717 | gap 1, overlap 4257987 TTAGCCTTGGCCACA G-CCCGACCGCTGGCG CATCCCCCGT CGCCAGCGGTCGGGTC TTTTCCTGGACTCGT TERM 1268 4257987 - 4258024 + T 100 -21.4 -3.73756 | overlap 4257986 TAGCCTTGGCCACAG CCCGACCGCTGGCG CATCCCCCGT CGCCAGCGGTCGGG TCTTTTCCTGGACTC TERM 1269 4258072 - 4258098 + T 86 -19.4 -3.23216 | opp_overlap 4258074 GACGGCGAACGCGAA GACCCCCAGCCG TAC CGGCCGGGGGTC TTGGTGCTGATGGGA TERM 1270 4258096 - 4258074 - T 81 -18.4 -3.09492 | opp_overlap 4258072 CGGCGAACGCGAAGA CCCCCAGCCG TAC CGGCCGGGGG TCTTGGTGCTGATGG SCO3870 4258428 - 4258228 - | integral membrane protein SCO3871 4258993 - 4259403 + | decarboxylase TERM 1271 4259756 - 4259783 + T 83 -17 -3.37796 | opp_overlap 4259756 GCCATGGATGTCAAA GACCCCCAGCCG TTGC CGACTGGGGGTC TTCTCGCTGGTGGGG TERM 1272 4259783 - 4259756 - T 95 -19.2 -3.61178 | opp_overlap 4259756 GCCATGGATGTCAAA GACCCCCAGCCG TTGC CGACTGGGGGTC TTCTCGCTGGTGGGG SCO3872 4260536 - 4259979 - | integral membrane protein TERM 1273 4260746 - 4260799 + r 72 -16.5 -2.78384 | gap 1 TCTCCTCGTGCTACT CGGCCGAGGGCGCCTCG-CCCTCGTC CGT GCCGGTGGTCGCGGCACCCTCGGCGG TCTCGTCGACGGCCA SCO3873 4263314 - 4260741 - | DNA gyrase subunit A gyrB 4265438 - 4263378 - | DNA gyrase subunit B TERM 1274 4265769 - 4265819 + r 100 -8.1 -5.26316 | ACGCGCGCTCACGCA CGGGGGT-ACGGCGCGGCACGCGCC GAC GGTTCACGCCGC-CCGTCGCCGCCG TTTTTTGTGAGGTAC SCO3875 4266445 - 4265873 - | hypothetical protein recF 4267563 - 4266442 - | recombination protein F SCO3877 4268469 - 4267594 - | 6-phosphogluconate dehydrogenase-like protein SCO3878 4269843 - 4268713 - | DNA polymerase III subunit beta TERM 1275 4270729 - 4270754 + r 80 -17.5 -3.14931 | opp_overlap 4270729 CAGGGGCATGGGAAA GGCGCCCCCGG GGTC CCGGAGGCGCC TTCGTGACCGGTGGG TERM 1276 4270754 - 4270729 - R 95 -19.7 -3.60296 | opp_overlap 4270729 CAGGGGCATGGGAAA GGCGCCCCCGG GGTC CCGGAGGCGCC TTCGTGACCGGTGGG SCO3879 4272748 - 4270778 - | chromosomal replication initiator protein TERM 1277 4273053 - 4273032 - H 74 -2.1 -4.67011 | AAGGTGATCGAAAAA GCGGTGCAC TCGG GCGTAACGC GAGCTACTCGTGGGC rpmH 4273127 - 4273264 + | 50S ribosomal protein L34 TERM 1278 4273402 - 4273443 + G 100 -23.7 -3.78775 | AAGCGGTGCCACGGA CCCGCACGCGCCTGGGGAG AGCG CTCCCCGGACACGTGCGGG TTTCGTCGTGAGCAA SCO3881 4273286 - 4273657 + | ribonuclease P component SCO3882 4273654 - 4274028 + | hypothetical protein SCO3883 4274032 - 4275327 + | putative inner membrane protein translocase component YidC SCO3884 4275343 - 4275855 + | hypothetical protein TERM 1279 4275871 - 4275903 + F 93 -13.3 -4.3898 | overlap 4275872 4275873 TCGGTTCTCTCGTTC CCCGGCCCCGTCTGT TGC GCAGGCGGGGCCGAA TTTTGTCAGCCTGAT TERM 1280 4275872 - 4275902 + F 80 -16.8 -3.22906 | overlap 4275871 4275873 CGGTTCTCTCGTTCC CCGGCCCCGTCTGT TGC GCAGGCGGGGCCGA ATTTTGTCAGCCTGA TERM 1281 4275873 - 4275901 + F 85 -20.3 -2.53422 | overlap 4275872 4275871 GGTTCTCTCGTTCCC CGGCCCCGTCTGT TGC GCAGGCGGGGCCG AATTTTGTCAGCCTG gidB 4275980 - 4276699 + | glucose-inhibited division protein B SCO3886 4277251 - 4278078 + | partitioning or sporulation protein SCO3887 4278195 - 4279181 + | partitioning or sporulation protein TERM 1282 4279229 - 4279279 + F 100 -27.1 -3.67792 | gap 1, overlap 4279194 4279234 ACTGCCGTAGGAGCG GCACAGGGCGGACTGTGT-CCGGT GCAT ACCGGAACACGGTCCGCCCTTTGC TTTGCGTCGGTGTCG TERM 1283 4279234 - 4279274 + F 100 -24.2 -4.08485 | gap 1, overlap 4279194 4279229 CGTAGGAGCGGCACA GGGCGGACTGTGT-CCGGT GCAT ACCGGAACACGGTCCGCCC TTTGCTTTGCGTCGG SCO3888 4279519 - 4280136 + | hypothetical protein TERM 1284 4280159 - 4280197 + T 91 -18.3 -3.60098 | gap 1, opp_overlap 4280166, overlap 4280162 4280166 CCGGAGACCGCTGTA CACCAAATGGGCCGACCC GTTC GGGTCGGCCCATTC-GTG TTTCACGTGAAACGT TERM 1285 4280162 - 4280195 + T 100 -21.1 -3.38046 | opp_overlap 4280166, overlap 4280159 4280166 GAGACCGCTGTACAC CAAATGGGCCGACCC GTTC GGGTCGGCCCATTCG TGTTTCACGTGAAAC TERM 1286 4280191 - 4280166 - T 100 -20.5 -3.83026 | opp_overlap 4280166 4280162 4280159 CCGCTGTACACCAAA TGGGCCGACCC GTTC GGGTCGGCCCA TTCGTGTTTCACGTG TERM 1287 4280166 - 4280191 + T 93 -20.5 -3.46285 | opp_overlap 4280166, overlap 4280162 4280159 CCGCTGTACACCAAA TGGGCCGACCC GTTC GGGTCGGCCCA TTCGTGTTTCACGTG SCO3889 4280544 - 4280212 - | thioredoxin SCO3890 4281551 - 4280583 - | thioredoxin reductase (NADPH) SCO3891 4282559 - 4281711 - | hypothetical protein SCO3892 4283287 - 4282577 - | RNA polymerase sigma factor SigM SCO3893 4285007 - 4283316 - | hypothetical protein SCO3894 4287582 - 4285147 - | transmembrane protein SCO3895 4289990 - 4287627 - | hypothetical protein SCO3896 4290216 - 4291667 + | RNA nucleotidyltransferase TERM 1288 4291663 - 4291713 + T 91 -17.7 -3.60098 | gap 1, opp_overlap 4291671 4291694 4291695 AGCACCCGGACAACG CATGA-GAACGGGCGGCACGTTTC ACGT GAAACGTGCCGCCCGCGGGTCATG TTTCACGTGAAACAT TERM 1289 4291704 - 4291671 - T 100 -26.9 -3.45033 | opp_overlap 4291663, overlap 4291694 4291695 GACAACGCATGAGAA CGGGCGGCACGTTTC ACGT GAAACGTGCCGCCCG CGGGTCATGTTTCAC SCO3897 4292357 - 4291764 - | hypothetical protein SCO3898 4293666 - 4292389 - | hypothetical protein TERM 1290 4293726 - 4293685 - R 84 -18.7 -2.89191 | GCACAGCCTCACATA CGGGAAGGGTCCCCGGGTC ATGC GACCCGGGGACCCTCGACA GACCGGGGTCAGCGG SCO3899 4294828 - 4293746 - | hypothetical protein SCO3900 4295550 - 4294873 - | hypothetical protein TERM 1291 4295107 - 4295131 + g 73 -15 -3.29144 | GTCGAGTCGCTCCCG GGTGCGGGCC AGTGA GGCCCGCATC TTCTCCAGGCGCTCC TERM 1292 4295565 - 4295618 + H 75 -15.5 -3.35679 | gap 1, opp_overlap 4295603 TCGTCGCCTCCTCTC GCCC-TTATGCCGTGCTGATGTATCG AGT CGATACATCAGCACGATAGAACGAGC TTCTGCGTGCGACAA SCO3901 4296215 - 4298602 + | secreted penicillin-binding protein TERM 1293 4298658 - 4298701 + F 79 -16.1 -3.31792 | gap 2, opp_overlap 4298660 4298662, overlap 4298660 4298661 GCACGTTCCACGTGA AAC-A-GGGGCCGCCGCATCC ACGA GGGTGCGGCGGCCCCGTCGTG TTCTCAGCCTCGTAC TERM 1294 4298660 - 4298699 + F 86 -18.7 -3.22653 | gap 2, opp_overlap 4298660 4298662, overlap 4298658 4298661 ACGTTCCACGTGAAA C-A-GGGGCCGCCGCATCC ACGA GGGTGCGGCGGCCCCGTCG TGTTCTCAGCCTCGT TERM 1295 4298696 - 4298660 - f 100 -21.6 -3.60098 | gap 1, opp_overlap 4298658 4298660 4298661, overlap 4298662 ACGTTCCACGTGAAA CAGGGGCCGCCGCATCC ACGA GGGTGCGGCGGCCCC-G TCGTGTTCTCAGCCT TERM 1296 4298661 - 4298696 + F 95 -24 -2.80252 | opp_overlap 4298660 4298662, overlap 4298660 4298658 CGTTCCACGTGAAAC AGGGGCCGCCGCATCC ACGA GGGTGCGGCGGCCCCG TCGTGTTCTCAGCCT TERM 1297 4298695 - 4298662 - f 100 -25.3 -3.38046 | opp_overlap 4298661 4298660 4298658, overlap 4298660 GTTCCACGTGAAACA GGGGCCGCCGCATCC ACGA GGGTGCGGCGGCCCC GTCGTGTTCTCAGCC SCO3902 4298723 - 4300231 + | integral membrane protein SCO3903 4301340 - 4300309 - | hypothetical protein SCO3904 4302523 - 4301402 - | hypothetical protein SCO3905 4302966 - 4302661 - | hypothetical protein rpsF 4303242 - 4303532 + | 30S ribosomal protein S6 SCO3907 4303613 - 4304212 + | single-strand DNA-binding protein rpsR 4304258 - 4304494 + | 30S ribosomal protein S18 rplI 4304513 - 4304959 + | 50S ribosomal protein L9 TERM 1298 4304984 - 4305020 + T 100 -30.3 -3.15861 | opp_overlap 4304986 TCGCTGAAGCGATGA GAGGGGCCGCATCTCCC GTA GGGGGATGCGGCCCCTC TTCGTGACCGTGCTC TERM 1299 4305018 - 4304986 - T 95 -24.9 -2.82933 | opp_overlap 4304984 GCTGAAGCGATGAGA GGGGCCGCATCTCCC GTA GGGGGATGCGGCCCC TCTTCGTGACCGTGC SCO3910 4306406 - 4305060 - | hypothetical protein SCO3911 4306857 - 4308332 + | replicative DNA helicase SCO3912 4308427 - 4309812 + | beta-lactamase TERM 1300 4309859 - 4309830 - T 100 -22.3 -3.65812 | opp_overlap 4309814, overlap 4309851 GCCGTCTGAACAGAA GCGGCCCTGTTTC ACGT GAAACAGGGCCGC GCGCCGCGTGTGACG SCO3913 4310339 - 4309887 - | hypothetical protein TERM 1301 4310259 - 4310299 + g 70 -17 -2.78816 | gap 2, overlap 4310280 4310282 TGACTCGCGCCGTGC TCCCAGCGGGTCGTCGGCGA GCA TCGC-GACGACC-GCCGGGA TGTCCTCGGCGGTGG SCO3914 4310850 - 4310386 - | transcriptional regulator SCO3915 4310991 - 4312205 + | transmembrane efflux protein SCO3916 4312354 - 4312773 + | hypothetical protein TERM 1302 4312831 - 4312859 + T 100 -26.1 -3.21099 | GTCACCGACCCGACG GCCGGTTCCCGGG AGA CCCGGGAACCGGC TTCGTCGTCCCGGAA SCO3917 4313757 - 4312891 - | hypothetical protein SCO3918 4314318 - 4313836 - | hypothetical protein SCO3919 4315294 - 4314389 - | LysR family transcriptional regulator SCO3920 4316725 - 4315547 - | cystathionine gamma-lyase SCO3921 4317216 - 4316722 - | low molecular weight protein-tyrosine-phosphatase SCO3922 4317599 - 4317222 - | hypothetical protein SCO3923 4317659 - 4317976 + | hypothetical protein SCO3924 4318118 - 4318330 + | hypothetical protein SCO3925 4318648 - 4319373 + | transcriptional regulator SCO3926 4319501 - 4319911 + | regulator SCO3927 4321502 - 4319961 - | hypothetical protein TERM 1303 4321409 - 4321437 + g 74 -16 -3.0644 | gap 1, opp_overlap 4321403 CGGAAGCGACGCCGG GGGCG-TGGCCGG CCGC CCGGCCGTCGCCC TCTTCGGCGTTCGGT SCO3928 4321756 - 4323594 + | thiamine biosynthesis protein ThiC TERM 1304 4323609 - 4323652 + T 100 -15.4 -4.84539 | opp_overlap 4323609 ACCCGACGCTTCAAA CGCCTACACCTCCATTTGCT TTGG AATGGATGGGGGTGTAGGCG TTTTGTCTTTCCTTC TERM 1305 4324392 - 4324425 + T 100 -13.9 -4.72272 | TGGCCATCTTGCCTT GCCTGTGCTCCTTCT TTAG ATGAGGGGCACAGGC TTTTTGCTGACGAGA SCO3929 4325793 - 4324441 - | hypothetical protein SCO3930 4325990 - 4326556 + | hypothetical protein TERM 1306 4326753 - 4326706 - f 76 -8.5 -4.27467 | overlap 4326708 4326710 TCACAACCCAAGAAA GAGACCGGGCCACCCACT-GCCC TGGA AAGCGAACGGGTGGCCCGGT-TG GGGAACGCGAAGATC TERM 1307 4326752 - 4326708 - f 82 -13.6 -3.73097 | gap 1, overlap 4326706 4326710 ACAACCCAAGAAAGA GACCGGGCCACCCACT-GCCC TGGA AAGCGAACGGGTGGCCCGGTT GGGGAACGCGAAGAT TERM 1308 4326750 - 4326710 - f 81 -16.2 -3.43412 | gap 1, overlap 4326708 4326706 AACCCAAGAAAGAGA CCGGGCCACCCACT-GCCC TGGA AAGCGAACGGGTGGCCCGG TTGGGGAACGCGAAG TERM 1309 4326761 - 4326797 + F 82 -19.6 -2.65815 | gap 1, opp_overlap 4326767, overlap 4326765 4326768 CCCGGTTGGGGAACG CGAAGATCCCCGGTGCC TCAT GGTACCGGGG-TCTTCG TGCTGTGCATCTGCC TERM 1310 4326768 - 4326791 + F 76 -16 -3.18849 | opp_overlap 4326767, overlap 4326765 4326761 GGGGAACGCGAAGAT CCCCGGTGCC TCAT GGTACCGGGG TCTTCGTGCTGTGCA SCO3931 4326866 - 4327165 + | hypothetical protein SCO3932 4328355 - 4327576 - | GntR family transcriptional regulator SCO3933 4328521 - 4328871 + | regulatory protein SCO3934 4328871 - 4330172 + | ftsK/SpoIIIE family protein SCO3935 4330169 - 4330366 + | hypothetical protein TERM 1311 4331353 - 4331334 - g 75 -7 -4.30576 | CGCCGAGTACCAAAA GCGCGCGG CCGT CCACGTGC ATACCGTCGTCCGCC SCO3936 4330663 - 4332021 + | plasmid replication initiator protein TERM 1312 4332148 - 4332097 - T 70 -13.1 -3.34895 | gap 2, overlap 4332098 TTGATCGGCAACTAA GGGATGCTCCCCCACTCTCCGACGA ACAG TTG-CGGAGCGTGGGGGAG-ATCCT GGGGCTCAGCCTCAC TERM 1313 4332147 - 4332098 - T 75 -16.6 -2.60723 | gap 2, overlap 4332097 TGATCGGCAACTAAG GGATGCTCCCCCACTCTCCGACGA ACAG TTG-CGGAGCGTGGGGGAG-ATCC TGGGGCTCAGCCTCA SCO3937 4333647 - 4332160 - | integrase /recombinase TERM 1314 4332564 - 4332581 + g 81 -4.9 -4.69028 | gap 1, overlap 4332567 GCTCCAGCTTGGCGA TCA-CGAG TTC CTCGATGA TTTTGTCTGTCTTGT SCO3938 4333799 - 4333930 + | thiamin biosynthesis protein ThiC TERM 1315 4333983 - 4333936 - f 71 -15.5 -3.07816 | gap 2 CGCGGACTGAGCGAA CCGGCGCGGGAGGGGGACAGGCC GCAG GGTCGG-CCCTCTCCC-CGCCGG GGGGTCCTGCTCGGC SCO3939 4334010 - 4335458 + | hypothetical protein SCO3940 4336355 - 4335483 - | transmembrane protein SCO3941 4337643 - 4336537 - | serine/threonineprotein kinase SCO3942 4337841 - 4338065 + | hypothetical protein SCO3943 4339146 - 4338034 - | transcriptional regulator SCO3944 4339565 - 4340644 + | putative aminotransferase TERM 1316 4340669 - 4340696 + F 100 -24.2 -3.59979 | GGGCGGGACGACGAG GCGCGGGACGGC AGGT GCCGTCCCGCGC TTTCGCATGCGGAGG SCO3945 4340932 - 4342437 + | cytochrome oxidase subunit I SCO3946 4342458 - 4343462 + | cytochrome oxidase subunit II TERM 1317 4344952 - 4344989 + G 76 -11.9 -3.85698 | gap 1, opp_overlap 4344943, overlap 4344952 ACGGAACCGGCCTGT C-CGCGGGACAGCGGCAG CGG CTGGCGCTGGCCCGGGCG TTTCTCGCGGACCGG SCO3947 4343538 - 4347056 + | ABC transporter SCO3948 4347161 - 4348843 + | two component sensor SCO3949 4348966 - 4350015 + | secreted peptidase SCO3950 4350980 - 4350063 - | hypothetical protein TERM 1318 4350656 - 4350690 + g 77 -15.7 -3.54424 | opp_overlap 4350645 CGAACCTGTGACTGC CGGGGCCGCCGTG CAGGTCGAC CACGGCGGCACCG TTTCCGCAGATGGCG SCO3951 4352000 - 4351038 - | hypothetical protein SCO3952 4352455 - 4351997 - | hypothetical protein SCO3953 4353010 - 4352462 - | phosphotransferase SCO3954 4354878 - 4353121 - | short chain dehydrogenase SCO3955 4355894 - 4354875 - | hypothetical protein SCO3956 4355990 - 4356952 + | ABC transporter ATP-binding protein SCO3957 4356969 - 4357850 + | integral membrane protein SCO3958 4357847 - 4358758 + | ABC transporter ATP-binding protein SCO3959 4358770 - 4359489 + | integral membrane protein SCO3960 4360551 - 4359709 - | hypothetical protein SCO3961 4361825 - 4360548 - | seryl-tRNA synthetase SCO3962 4363267 - 4362335 - | prephenate dehydratase TERM 1319 4363061 - 4363097 + g 72 -13.8 -3.35679 | gap 1, opp_overlap 4363039 CTGGCCGGCGACCAG CT-CGTCGAGGGTGGTG GTGA TGCCGCCCTCGACGGAG TTCTCGATCGGCACG SCO3963 4364685 - 4363348 - | hypothetical protein SCO3964 4366736 - 4364694 - | hypothetical protein TERM 1320 4364825 - 4364862 + g 70 -13.3 -3.35679 | GGCCGGTGGTGATGT GGTCGGGGGCGACGGGC AGCG GCCCGATGCTCTTGGCC TTCTGCGTGAGGGCC SCO3965 4367286 - 4366750 - | hypothetical protein TERM 1321 4367246 - 4367289 + g 72 -14.4 -3.33737 | overlap 4367264 CGCCTCACGGGGCCT CCCGCGAGCCGTCTCACGGG ACCT TCCGCGAGCCGCCTCACGGG TTCTCCCCCTTGATG SCO3966 4367933 - 4367283 - | secreted protein SCO3967 4368827 - 4368066 - | hypothetical protein SCO3968 4369809 - 4368955 - | integral membrane protein SCO3969 4370548 - 4370066 - | ATP/GTP-binding protein SCO3970 4372061 - 4370586 - | Xaa-Pro aminopeptidase SCO3971 4373629 - 4372196 - | hypothetical protein SCO3972 4374285 - 4374950 + | hypothetical protein SCO3973 4375006 - 4375671 + | hypothetical protein TERM 1322 4375751 - 4375711 - T 90 -12.7 -4.25104 | gap 1, overlap 4375713 4375747 CCGGGGGCAGGAAAA GACCCGGTTGCTGGCG ACGGGGGATG CACCAGCAACCGGG-C TACTCGAACGGTAAC TERM 1323 4375750 - 4375713 - T 90 -16.4 -3.73042 | overlap 4375711 4375747 GGGGGCAGGAAAAGA CCCGGTTGCTGGCG ACGGGGGATG CACCAGCAACCGGG CTACTCGAACGGTAA SCO3974 4376882 - 4375917 - | hypothetical protein SCO3975 4378143 - 4377505 - | regulator SCO3976 4379098 - 4378271 - | phosphodiesterase SCO3977 4379364 - 4380923 + | protease (secreted protein) TERM 1324 4380949 - 4380990 + T 85 -19.5 -3.05384 | gap 1, opp_overlap 4380953, overlap 4380953 CGCACACCACGCTCA ACCACTTCGCCACCGG-GGC CGG GCCTCCGGTGGCGAAGTGCA TTCAGTGAGGCAGGC TERM 1325 4380986 - 4380953 - T 93 -23.3 -2.72661 | gap 1, opp_overlap 4380949 4380953 CACCACGCTCAACCA CTTCGCCACCGG-GGC CGG GCCTCCGGTGGCGAAG TGCATTCAGTGAGGC TERM 1326 4380953 - 4380986 + T 93 -23.3 -2.54896 | gap 1, opp_overlap 4380953, overlap 4380949 CACCACGCTCAACCA CTTCGCCACCGG-GGC CGG GCCTCCGGTGGCGAAG TGCATTCAGTGAGGC SCO3978 4381949 - 4381065 - | oxidoreductase SCO3979 4382030 - 4382620 + | TetR family transcriptional regulator TERM 1327 4382776 - 4382814 + T 75 -17.5 -2.63596 | opp_overlap 4382756 ACCCACCGCAGGTGT TGACGGCCCCTGACC AGGCGTTAC GGTCGGGGGCCGTCG TCGTGTGGGCTACCC SCO3980 4383473 - 4382898 - | hypothetical protein SCO3981 4384371 - 4383616 - | GntR family transcriptional regulator SCO3982 4384451 - 4384729 + | hypothetical protein SCO3983 4384742 - 4385053 + | hypothetical protein SCO3984 4385053 - 4385256 + | hypothetical protein SCO3985 4385253 - 4385477 + | hypothetical protein SCO3986 4385486 - 4386217 + | GntR family transcriptional regulator SCO3987 4386217 - 4386522 + | hypothetical protein SCO3988 4386552 - 4386899 + | hypothetical protein TERM 1328 4387029 - 4387072 + F 71 -16.1 -2.52464 | gap 2, opp_overlap 4387054 GACGTTGGTCATCGT TGAGCGCCCTTCCACGGTCCG AAGA CGGCCCG-G-AAGGGCGCTCG TACGTTGCGGGAGAC SCO3989 4387240 - 4387509 + | ribonuclease inhibitor SCO3990 4388060 - 4387791 - | hypothetical protein TERM 1329 4388282 - 4388339 + r 70 -13.9 -3.17392 | gap 1, overlap 4388286 4388288 GTAGTGGTCCCGGTC GAAGCCGGCGGGCCTGCCGCCTTCTCTG CCT CTGCGGCGGCGGTTGGCCCGCTGG-TCC TTCGGTTCCGGGATC TERM 1330 4388286 - 4388336 + r 86 -20.2 -2.78712 | overlap 4388282 4388288 TGGTCCCGGTCGAAG CCGGCGGGCCTGCCGCCTTCTCTG CCT CTGCGGCGGCGGTTGGCCCGCTGG TCCTTCGGTTCCGGG TERM 1331 4388590 - 4388637 + r 73 -10.6 -3.81575 | gap 3, overlap 4388633 TCTTGCAGGTCAGGC CGCCCCGGGACCGTCCGAGTCCC TCGTC GGGG--CGG-TGGTGCCGGGGCG TTGTCCTTTTTTCGG TERM 1332 4388633 - 4388643 + r 85 -4.6 -5.00616 | overlap 4388590 GGGGCGGTGGTGCCG GGGC GTT GTCC TTTTTTCGGGACCCG SCO3992 4389544 - 4389254 - | hypothetical protein SCO3993 4389862 - 4389593 - | hypothetical protein SCO3994 4389919 - 4390131 + | hypothetical protein SCO3995 4390122 - 4390649 + | partial replication initiator protein SCO3996 4390652 - 4390861 + | excisionase SCO3997 4390861 - 4392000 + | integrase SCO3998 4393617 - 4392274 - | hypothetical protein TERM 1333 4393550 - 4393540 - G 84 -2.4 -4.99947 | overlap 4393542 TGCAACGAAACAAAA CCGC CGC GCGC GCATGAACTCCCTTT TERM 1334 4393921 - 4393953 + H 93 -20.7 -3.52539 | CACCGCGGTATTTGA CGGCCCCTGACCA GGCGTTG TGGTCAGGGGCCG TTGTCGTTGCGGTTG SCO3999 4394003 - 4395133 + | lipoprotein SCO4000 4395579 - 4395100 - | hypothetical protein SCO4001 4396546 - 4395671 - | hypothetical protein SCO4002 4396912 - 4397238 + | secreted protein TERM 1335 4397239 - 4397286 + T 70 -13.2 -3.32521 | overlap 4397261 CCGCTGTGGTGGTGA GCTGAGGGGGCCCGGCGCGG GTGCGCTG CCGCGCCGGTCCCTCGGTGC TTGTGCGGGTGTGCT TERM 1336 4397318 - 4397355 + T 100 -25.7 -3.96148 | CATGGGGTCGCAGTG CGTCCGGGCGACCGTAC TCAG GTACCGTCGCCCGGACG TTTCTCGTGCCCGGG SCO4003 4397688 - 4397335 - | hypothetical protein SCO4004 4397855 - 4397691 - | small membrane protein SCO4005 4397899 - 4398372 + | RNA polymerase sigma factor SCO4006 4398501 - 4400177 + | acyl-CoA synthetase SCO4007 4401542 - 4400250 - | integral membrane protein SCO4008 4401679 - 4402257 + | tetR family regulatory protein SCO4009 4406688 - 4402297 - | bifunctional protein (histidine kinase and regulator) SCO4010 4407330 - 4406863 - | secreted protein TERM 1337 4407645 - 4407609 - H 100 -23.8 -3.14132 | opp_overlap 4407611 4407613 4407616, overlap 4407616 CCGCCTCCGCACGAA CACGGAAGCCCCGGCC CACCC GGCCGGGGCTTCTGTG TTGCCGACCGCCCGC TERM 1338 4407611 - 4407643 + H 93 -22.8 -3.01712 | opp_overlap 4407609 4407616, overlap 4407613 4407616 GCCTCCGCACGAACA CGGAAGCCCCGGCC CACCC GGCCGGGGCTTCTG TGTTGCCGACCGCCC TERM 1339 4407613 - 4407641 + H 93 -21.8 -3.06696 | opp_overlap 4407609 4407616, overlap 4407611 4407616 CTCCGCACGAACACG GAAGCCCCGGCC CACCC GGCCGGGGCTTC TGTGTTGCCGACCGC TERM 1340 4407638 - 4407616 - H 82 -17.7 -3.20348 | opp_overlap 4407613 4407611 4407616, overlap 4407609 CGCACGAACACGGAA GCCCCGGCC CACCC GGCCGGGGC TTCTGTGTTGCCGAC TERM 1341 4407616 - 4407638 + H 91 -17.7 -3.68024 | opp_overlap 4407616 4407609, overlap 4407613 4407611 CGCACGAACACGGAA GCCCCGGCC CACCC GGCCGGGGC TTCTGTGTTGCCGAC TERM 1342 4407874 - 4407909 + H 100 -29.2 -4.82901 | CGAGTGCACAGTGCG GCGGAAGCCCCGTGGA TCTC TCCACGGGGCTTCCGC TTTTTCTCGGGGCAG SCO4011 4407941 - 4408414 + | integral membrane protein SCO4012 4408838 - 4408407 - | integral membrane protein SCO4013 4409067 - 4410554 + | secreted penicillin-binding protein SCO4014 4410936 - 4410577 - | hypothetical protein TERM 1343 4410947 - 4410981 + H 100 -25.1 -3.37796 | overlap 4410948 GTCATACGGTACGTC CGGGCGGGCGCTCAC CATGA GTGAGTGCCCGCCCG TTGTCAGTGCTGCCC SCO4015 4410971 - 4411894 + | hypothetical protein SCO4016 4412004 - 4412957 + | hypothetical protein SCO4017 4413733 - 4413017 - | iron dependent repressor SCO4018 4414275 - 4413742 - | hypothetical protein SCO4019 4414377 - 4415069 + | gntR family regulatory protein TERM 1344 4415123 - 4415139 + F 70 -9.3 -3.86015 | CTGACGGGCGGTGCG CGCGCGG TGC CCGAGCG TTTCTCAGAGAAATC SCO4020 4415129 - 4415944 + | two component system response regulator SCO4021 4415941 - 4417515 + | two component system histidine kinase SCO4022 4417530 - 4418879 + | glycosyl transferase SCO4023 4418876 - 4421077 + | integral membrane protein TERM 1345 4421137 - 4421095 - f 100 -21.6 -3.96148 | overlap 4421096 GCTCCGGACGAGAAA GTGTTGTACAGCGTATAGGA AAG CCCTATACGCTGTACAACAT GACGACGTCACCCCA TERM 1346 4421136 - 4421096 - f 95 -25.1 -2.97475 | overlap 4421095 CTCCGGACGAGAAAG TGTTGTACAGCGTATAGGA AAG CCCTATACGCTGTACAACA TGACGACGTCACCCC SCO4024 4421136 - 4422659 + | integral membrane efflux protein SCO4025 4422721 - 4423479 + | tetR family transcriptional regulatory protein SCO4026 4424019 - 4423549 - | ATP binding protein SCO4027 4424409 - 4424029 - | anti sigma factor antagonist TERM 1347 4424250 - 4424225 - G 71 -11.1 -3.74693 | TGGGAGTCCATGAAA CGGGTCCCGGA CAGG TCCAGGACCAG CAGGCGCAGTCCGTC SCO4028 4424566 - 4425387 + | hypothetical protein SCO4029 4425406 - 4426155 + | hypothetical protein SCO4030 4426959 - 4426138 - | hypothetical protein TERM 1348 4427004 - 4427062 + r 85 -19.7 -2.66216 | gap 3, opp_overlap 4427004, overlap 4427005 GTGGTCGTAAAGAAA -CCGGCCCGTGGTGGGCGGGCGCAC-CT CCGCTC AGAGCGCGCACGCC-ACCACGGGCCGGG GTTCTGCTACTCGCC TERM 1349 4427061 - 4427004 - R 100 -28.6 -4.41348 | gap 2, opp_overlap 4427004 4427005 GTGGTCGTAAAGAAA CCGGCCCGTGGTGGGCGGGCGCACCTCC GCTC AGAG-CGCGCACGCC-ACCACGGGCCGG GGTTCTGCTACTCGC SCO4031 4429648 - 4427069 - | integral membrane transport protein TERM 1350 4428037 - 4428080 + g 78 -17.4 -3.14132 | gap 1 TGCCCGCCACCGGCG GGGCGGCCTCGGCCGAGGCTT CCG ACGCCTGGGC-GAGGGCGCCC TTGGTGCGCAGCGGG SCO4032 4430162 - 4429662 - | marR regulatory protein SCO4033 4430278 - 4430568 + | hypothetical protein TERM 1351 4430599 - 4430571 - T 75 -14.6 -3.28712 | gap 1 GGCGCTCGGCTAGAA CCGGCACCGGGCC CTTT GGCC-GGTACCGG CACATACGAAGGCGA TERM 1352 4430607 - 4430654 + T 93 -23.5 -2.78935 | gap 1, opp_overlap 4430610, overlap 4430609 GGTACCGGCACATAC G-AAGGCGACCGCCGCGGCACC CCCGA GGTGCCACGGCGGTCGCCGTGC TGTCGTACGGGCTCT TERM 1353 4430609 - 4430651 + T 95 -26.3 -2.66316 | opp_overlap 4430610, overlap 4430607 TACCGGCACATACGA AGGCGACCGCCGCGGCACC CCCGA GGTGCCACGGCGGTCGCCG TGCTGTCGTACGGGC TERM 1354 4430650 - 4430610 - T 100 -32.7 -3.322 | opp_overlap 4430609 4430607 ACCGGCACATACGAA GGCGACCGCCGCGGCACCC CCG AGGTGCCACGGCGGTCGCC GTGCTGTCGTACGGG SCO4034 4431640 - 4430684 - | RNA polymerase sigma factor SCO4035 4432795 - 4431932 - | RNA polymerase sigma factor TERM 1355 4432948 - 4432922 - R 100 -20.9 -4.19953 | GAGTGAACGCGAAAA GGCCCCGCACC GGGCA GGTGCGGGGCC GAGGGCGTCGGAGCC SCO4036 4433281 - 4432988 - | hypothetical protein SCO4037 4433457 - 4433281 - | small membrane protein TERM 1356 4433537 - 4433514 - R 86 -19.6 -3.17212 | opp_overlap 4433511 TCATGATCGCACGAA GGGCCCCGTC TTTC GACGGGGCCC TTCAAAAGCGGTAGC SCO4038 4434139 - 4433708 - | deaminase SCO4039 4434756 - 4434208 - | hypothetical protein SCO4040 4434929 - 4435393 + | hypothetical protein upp 4435469 - 4436113 + | uracil phosphoribosyltransferase SCO4042 4436752 - 4436138 - | hypothetical protein TERM 1357 4436278 - 4436331 + g 77 -18.1 -3.02144 | gap 1 CACCCTTGCGGGCCG CGTCG-GCGCGGTGCTCGGCGCCGGG CAA CTGGGTGCCGAGCACGGTGAGCGACG TCTTGAGGGACGTGG SCO4043 4437184 - 4436888 - | hypothetical protein SCO4044 4437234 - 4437938 + | hypothetical protein SCO4045 4438649 - 4437969 - | integral membrane protein SCO4046 4439197 - 4438739 - | hypothetical protein SCO4047 4439791 - 4439198 - | hypothetical protein SCO4048 4440542 - 4439817 - | hypothetical protein SCO4049 4440627 - 4442975 + | antibiotic binding protein SCO4050 4442968 - 4443588 + | acetyltransferase SCO4051 4443585 - 4444082 + | hypothetical protein SCO4052 4444079 - 4444873 + | glucose 1-dehydrogenase TERM 1358 4445081 - 4445124 + F 87 -20.2 -3.05384 | gap 1 CGTGGTCTCCAGGGC CGGG-CTGGCCGGGCCCGCCG GGA CTGCCGGCCGGGCCAGGCCCG TTGGCTCCGGCGGAA SCO4053 4445276 - 4447045 + | transport integral membrane protein SCO4054 4447284 - 4447970 + | integral membrane protein SCO4055 4449100 - 4447967 - | alcohol dehydrogenase TERM 1359 4449329 - 4449379 + G 79 -18.3 -2.82635 | gap 1, overlap 4449310 4449373 CGACGGTGACCGTCC GCGGACGCGGCGCCACCGTCGACG CCTT CGTCGACGGTGAC-TGGCTTCCGC TGTCGTGGTGGGAGT SCO4056 4449241 - 4449432 + | secreted protein SCO4057 4450345 - 4449455 - | transport integral membrane protein SCO4058 4450575 - 4451078 + | hypothetical protein SCO4059 4451075 - 4451410 + | transcriptional regulator TERM 1360 4451546 - 4451509 - f 87 -19.9 -3.03771 | opp_overlap 4451511 GTACACCGCCGAACA CGTCGAAGGGCCCCCTG TTTC CAGGGGGCCCTTCGATT TCGTGCCCGGTGAGG TERM 1361 4451511 - 4451544 + F 100 -26.9 -3.73224 | opp_overlap 4451509 ACACCGCCGAACACG TCGAAGGGCCCCCTG TTTC CAGGGGGCCCTTCGA TTTCGTGCCCGGTGA SCO4060 4451653 - 4452063 + | hypothetical protein TERM 1362 4452113 - 4452148 + T 93 -18.3 -3.76048 | opp_overlap 4452134 CTCCTCGCCGCGCCG CAGCTCCGACGCGGG AAGTGA TCCGCGCCGGAGCTG TTGTGTTCCTTGGGA SCO4061 4452730 - 4452173 - | hypothetical protein TERM 1363 4452689 - 4452744 + g 79 -18.4 -2.81256 | gap 1 AAGCGCAACGAGCGA GGCCCCCGGGCAGT-TGATCGAGATGT CTG ACGTCTCAACCACACTGCTCAGGGGCC TCGTTGATCATCTAT SCO4062 4452748 - 4453257 + | transposase SCO4063 4453855 - 4453499 - | secreted protein SCO4064 4454151 - 4453888 - | hypothetical protein SCO4065 4455793 - 4454564 - | transposase SCO4066 4455786 - 4456859 + | hypothetical protein TERM 1364 4459140 - 4459173 + G 74 -17.4 -2.71144 | gap 1 CGGTCGTCGACCCGT CCGGCGGCGGCGCGG CGCCC CCGC-CCGCCGGCGG TCCTTCCGGCCCCTC SCO4067 4457168 - 4459522 + | DNA polymerase III subunits gamma and tau SCO4068 4459642 - 4460892 + | phosphoribosylamine--glycine ligase TERM 1365 4460919 - 4460957 + F 100 -20.4 -3.8594 | gap 1, opp_overlap 4460916, overlap 4460919 CCTGTCACCGAACCC GG-CAGGCCCCGGCTCC GTCTCA GGAGTCGGGGCCTGACC TTTGCTGTCCGTCTT TERM 1366 4460919 - 4460956 + F 86 -20.6 -2.90841 | opp_overlap 4460916, overlap 4460919 CCTGTCACCGAACCC GGCAGGCCCCGGCTCC GTCTCA GGAGTCGGGGCCTGAC CTTTGCTGTCCGTCT SCO4069 4461199 - 4463193 + | integral membrane protein SCO4070 4463358 - 4464875 + | hypothetical protein hemH 4464986 - 4465885 + | phosphoribosylaminoimidazole-succinocarboxamide synthase TERM 1367 4465944 - 4465916 - T 100 -23.3 -3.14463 | opp_overlap 4465916 4465919, overlap 4465919 AAGGCCGCGCACGAA GAAGCCCCCGGTT GAA AACCGGGGGCTTC TCCTCTGGAGCGAAC TERM 1368 4465916 - 4465944 + T 93 -23.3 -2.62184 | opp_overlap 4465916 4465919, overlap 4465919 AAGGCCGCGCACGAA GAAGCCCCCGGTT GAA AACCGGGGGCTTC TCCTCTGGAGCGAAC TERM 1369 4465919 - 4465941 + T 93 -19.2 -3.46602 | opp_overlap 4465919 4465916, overlap 4465916 GCCGCGCACGAAGAA GCCCCCGGTT GAA AACCGGGGGC TTCTCCTCTGGAGCG TERM 1370 4465941 - 4465919 - T 95 -19.2 -3.71848 | opp_overlap 4465916 4465919, overlap 4465916 GCCGCGCACGAAGAA GCCCCCGGTT GAA AACCGGGGGC TTCTCCTCTGGAGCG SCO4072 4466665 - 4466063 - | LuxR family two component system response regulator SCO4073 4467921 - 4466674 - | sensor kinase SCO4074 4468766 - 4467951 - | integral membrane protein SCO4075 4469743 - 4468763 - | ABC transport protein, ATP-binding subunit TERM 1371 4469848 - 4469872 + r 76 -17.1 -2.70932 | opp_overlap 4469848, overlap 4469850 CCGGACACACGAAAA GACCCCGGCCC TAA GGACCGGGGTC TGATTCCCGAGCGGA TERM 1372 4469872 - 4469848 - R 100 -19.3 -4.39166 | opp_overlap 4469848 4469850 CCGGACACACGAAAA GACCCCGGCCC TAA GGACCGGGGTC TGATTCCCGAGCGGA SCO4076 4470578 - 4470261 - | LSR2-like protein SCO4077 4470929 - 4471201 + | phosphoribosylformylglycinamidine synthase subunit PurS SCO4078 4471198 - 4471878 + | phosphoribosylformylglycinamidine synthase subunit I SCO4079 4471875 - 4474133 + | phosphoribosylformylglycinamidine synthase II TERM 1373 4474156 - 4474187 + T 93 -23.8 -2.62184 | AGCTCCCTGAACGTC CGAGGTCCCGTCCG GTTC CGGGCGGGACCTCG TCGTCTCAGCGCACG SCO4080 4474777 - 4474193 - | hypothetical protein SCO4081 4474926 - 4475408 + | hypothetical protein SCO4082 4475477 - 4476316 + | secreted peptidase SCO4083 4476421 - 4477734 + | hypothetical protein SCO4084 4477740 - 4478348 + | hypothetical protein TERM 1374 4478554 - 4478523 - g 76 -15.8 -3.35679 | opp_overlap 4478494, overlap 4478524 CTGCGGGAGCGAGAA GGCCGACGGCACCG GCAG CGGTTCCGTCGGCG CGGACGGAGCGCGCG TERM 1375 4478553 - 4478524 - g 76 -19.3 -2.61264 | opp_overlap 4478494, overlap 4478523 TGCGGGAGCGAGAAG GCCGACGGCACCG GCAG CGGTTCCGTCGGC GCGGACGGAGCGCGC SCO4085 4478431 - 4479264 + | lipoprotein TERM 1376 4480817 - 4480860 + G 80 -10.9 -4.09685 | gap 1 GGCCGCCGGGCCCGC CGGTACGGCCGCCGCCGACG CCATC CGTCGCCCGTAGCCGT-CCG TTTTCCCGGATCGCC SCO4086 4479261 - 4480853 + | amidophosphoribosyltransferase SCO4087 4480933 - 4482000 + | phosphoribosylaminoimidazole synthetase TERM 1377 4482059 - 4482030 - T 100 -23.7 -3.54475 | opp_overlap 4482026 4482023 GCGGGTAGCACAGAA CCCGGTCGGTGAC AGAG GTCACCGACCGGG AAGGTGTTCAGTGCA SCO4088 4482332 - 4482078 - | hypothetical protein SCO4089 4483748 - 4482654 - | valine dehydrogenase TERM 1378 4483423 - 4483441 + g 70 -14.6 -3.214 | opp_overlap 4483413, overlap 4483422 ACGAACCGGCCGTAG GCGAGGAG CAG CTCCTCGC TCTTGATCTGCTCCG SCO4090 4483978 - 4484829 + | hypothetical protein TERM 1379 4485026 - 4485008 - f 72 -11.7 -3.60884 | opp_overlap 4485008, overlap 4485002 4485000 GCCAAAATAGGACAA GGAGCCC GGGGA GGGCTCC TTCCGTCCTGCCGTG SCO4091 4485363 - 4485569 + | DNA-binding protein TERM 1380 4485676 - 4485705 + T 100 -20.1 -5.60993 | GAGGTGCGTCGTTGA TCGCGCTGGACTC CGCC GGGTCCAGCGCGA TTTTTTTGTGCCCGG TERM 1381 4486306 - 4486328 + T 77 -14.9 -3.57144 | opp_overlap 4486281 CAAGGCCGCGAGAGG CGCCCTGAG GGTCA CTCAGGGCG TTTGACGGTCCCGGA TERM 1382 4486431 - 4486463 + T 87 -20 -3.07113 | gap 1, opp_overlap 4486431 4486434, overlap 4486391 4486434 CCGACGGGACACGAA GAAGCCCCGCGCCGA TTGC TCGG-GCGGGGCTTC TTCACTGCGGTCCTG TERM 1383 4486463 - 4486431 - T 87 -20 -3.27022 | gap 1, opp_overlap 4486391 4486431 4486434, overlap 4486434 CCGACGGGACACGAA GAAGCCCCGCGCCGA TTGC TCGG-GCGGGGCTTC TTCACTGCGGTCCTG TERM 1384 4486434 - 4486460 + T 87 -15.9 -3.68073 | gap 1, opp_overlap 4486434 4486431, overlap 4486391 4486431 ACGGGACACGAAGAA GCCCCGCGCCGA TTGC TCGG-GCGGGGC TTCTTCACTGCGGTC TERM 1385 4486460 - 4486434 - T 90 -15.9 -3.77588 | gap 1, opp_overlap 4486391 4486431 4486434, overlap 4486431 ACGGGACACGAAGAA GCCCCGCGCCGA TTGC TCGG-GCGGGGC TTCTTCACTGCGGTC SCO4092 4490622 - 4486639 - | ATP-dependent helicase TERM 1386 4490701 - 4490724 + r 93 -18.2 -3.84825 | opp_overlap 4490701 AGGCGACGACAACAA GGCCCCGATC CGAG GATCGGGGCC TTTGCTGTGGCTGGG TERM 1387 4490724 - 4490701 - R 93 -18.2 -3.84674 | opp_overlap 4490701 AGGCGACGACAACAA GGCCCCGATC CGAG GATCGGGGCC TTTGCTGTGGCTGGG SCO4093 4492711 - 4491092 - | integral membrane protein SCO4094 4492828 - 4493178 + | hypothetical protein SCO4095 4493275 - 4493832 + | lipoprotein SCO4096 4494136 - 4496358 + | ATP-dependent RNA helicase TERM 1388 4496416 - 4496377 - f 100 -35.2 -3.31322 | opp_overlap 4496414 CTGAACGTCTGACAA GCGCCGTGGCCTCCACCC CGCC GGGTGGAGGCCACGGCGC TTCGCGTTGCGGTCC TERM 1389 4497678 - 4497654 - g 78 -17.2 -3.16564 | CCCCTACCTGATCAA CGTCACGGCG TACGC CGCCGTGACG TCGATCGCGGTCATC SCO4097 4496497 - 4498032 + | amino acid/metabolite permease TERM 1390 4498049 - 4498101 + T 84 -19 -2.82015 | CCAGGGCCCCGTGCC CACCGACGCGGCCGTGACCCCGAT ACCCG ATCGGCGTCCCGGCCGCGGCGGGC TATGCTCGGTGTGGC TERM 1391 4498228 - 4498262 + T 95 -15.1 -4.2828 | CAGGGCCTACTCGTC GGACCCCGGCTCA CGGCAGGAC TGAGCTGGGGTCC TTTTCGTCCGTGCGG SCO4098 4498869 - 4498219 - | acetyltransferase TERM 1392 4499626 - 4499659 + G 72 -14.5 -3.35679 | gap 1, overlap 4499619 TCCGGAACGGGCGGC GGCGGCCGCGGT-GCT GGC GGCCGCCGCGGGCGCC TTCTCCGTCCCCCGG SCO4099 4499009 - 4499689 + | tetR family transcriptional regulator SCO4100 4499727 - 4500119 + | hypothetical protein SCO4101 4500126 - 4500524 + | secreted protein SCO4102 4501464 - 4500505 - | MerR family transcriptional regulator SCO4103 4502795 - 4501524 - | peptidase SCO4104 4503476 - 4502820 - | integral membrane protein SCO4105 4503887 - 4504207 + | hypothetical protein SCO4106 4504259 - 4505389 + | bifunctional enzyme deaminase/reductase TERM 1393 4505538 - 4505580 + F 87 -18.5 -3.53811 | gap 1, opp_overlap 4505539, overlap 4505539 4505541 TGTCCCCGCTACTGA AG-GCCGAGGGCCGGAATCC GAAA GGGTTCCGGCCCTCGGTGCG TTTCCGGCAGGTGCC TERM 1394 4505578 - 4505539 - f 81 -17.8 -3.05384 | opp_overlap 4505539 4505538 4505541 GTCCCCGCTACTGAA GGCCGAGGGCCGGAATCC GAAA GGGTTCCGGCCCTCGGTG CGTTTCCGGCAGGTG TERM 1395 4505539 - 4505579 + F 90 -22 -2.72144 | gap 1, opp_overlap 4505539, overlap 4505538 4505541 GTCCCCGCTACTGAA G-GCCGAGGGCCGGAATCC GAAA GGGTTCCGGCCCTCGGTGC GTTTCCGGCAGGTGC TERM 1396 4505541 - 4505576 + F 95 -27 -2.64155 | opp_overlap 4505539, overlap 4505539 4505538 CCCCGCTACTGAAGG CCGAGGGCCGGAATCC GAAA GGGTTCCGGCCCTCGG TGCGTTTCCGGCAGG SCO4107 4505576 - 4506940 + | integral membrane protein TERM 1397 4507872 - 4507854 - g 74 -11.6 -3.78934 | CGCGGCGGAGAAGAA GGCCGCGG AAG CCGCCGCC AAGGCGGAGAAGGAG SCO4108 4507333 - 4508376 + | peptidase TERM 1398 4508411 - 4508452 + F 85 -17.2 -3.57309 | overlap 4508432 GCGCCCCGCTGATCC CCGGCGGTCCTGACGGCG ACCCCC CGACGCCAGGGCTGCCGG TTTGCGGGGATTTTG SCO4109 4508515 - 4509459 + | oxidoreductase SCO4110 4510875 - 4509484 - | integral membrane protein SCO4111 4511700 - 4510885 - | hypothetical protein SCO4112 4511815 - 4512225 + | hypothetical protein TERM 1399 4512348 - 4512305 - T 72 -15.8 -2.73364 | overlap 4512307 GCCTGATCCGAACGA CACCCCCTAGCCGGCCCGCC GGGG GGCCGGGCGGCCGGGTGGTG CCTGGTCCGCCAGCA SCO4113 4513591 - 4512311 - | hypothetical protein SCO4114 4515083 - 4513662 - | sporulation associated protein TERM 1400 4516151 - 4516183 + G 73 -9 -4.07687 | gap 1 TGGGGCGGCGGATCA CCGTCTGCGGCGACC TCGC GGGCGC-GCGGCCGG TTTTCCACACCCCCT SCO4115 4515796 - 4517919 + | secreted protein SCO4116 4517925 - 4521269 + | AfsR-like regulatory protein SCO4117 4523319 - 4521256 - | hypothetical protein TERM 1401 4523372 - 4523382 + r 80 -6.8 -4.63218 | ACACCGGGTCAGCGT GCCA TAT TGGC TTTTGTTCAGGACCC SCO4118 4524395 - 4523502 - | TetR family transcriptional regulator SCO4119 4524821 - 4526149 + | NADH dehydrogenase SCO4120 4526332 - 4527990 + | hypothetical protein SCO4121 4529322 - 4528045 - | integral membrane protein SCO4122 4529468 - 4530016 + | MarR family transcriptional regulator TERM 1402 4534486 - 4534475 - T 74 -2.2 -4.7254 | ACTGTTTACTAAAAA CACA GGTC CGTG CGAAGCCGTAAGGCG TERM 1403 4535148 - 4535132 - T 70 -2.9 -4.4715 | overlap 4535134 GCTCAACGGATAAAA GGTACCC CGG GGATAAC AGGCTGATCTTCCCC TERM 1404 4535659 - 4535639 - T 70 -9.7 -3.79909 | opp_overlap 4535630 4535648 TGAAACCACGAACAA CCCCATGTG CCA CACATGGTG CGGTTGAGTGTTTCA TERM 1405 4535809 - 4535842 + T 88 -21.1 -2.59431 | opp_overlap 4535803, overlap 4535814 GAACAATTATTGCTG GGAGACCCCGCACCG GGAA CGGTGCGGGGTTTTC TGCGTTCTACCCCCG TERM 1406 4535814 - 4535837 + T 100 -19.6 -4.49337 | opp_overlap 4535803, overlap 4535809 ATTATTGCTGGGAGA CCCCGCACCG GGAA CGGTGCGGGG TTTTCTGCGTTCTAC SCO4123 4536530 - 4535862 - | two-component system response regulator SCO4124 4537897 - 4536527 - | two-component sensor kinase SCO4125 4537923 - 4538456 + | acetyltransferase TERM 1407 4538458 - 4538499 + T 82 -18 -3.14132 | gap 2, overlap 4538497 TGCTCGAGCGCTGAC CCGCCTCGCGCCGCCGGGCC CCAG GGCTCGTCG-CGCG-GGCGG TTCGTCAGACGGGCA SCO4126 4539991 - 4538504 - | hypothetical protein TERM 1408 4539414 - 4539438 + g 77 -15.7 -3.53012 | overlap 4539416 TCCCCGGGGCCGTAG TGCACCGCGCC TTC GGCGCGGTGTG TTTCCCACCCACCCA TERM 1409 4539416 - 4539436 + g 86 -18.3 -3.34398 | overlap 4539414 CCCGGGGCCGTAGTG CACCGCGCC TTC GGCGCGGTG TGTTTCCCACCCACC SCO4127 4541480 - 4540065 - | ATP/GTP-binding protein SCO4128 4543034 - 4541493 - | hypothetical protein SCO4129 4544311 - 4543049 - | integral membrane protein TERM 1410 4543247 - 4543284 + g 72 -14.7 -3.41602 | overlap 4543219 4543218 GGAGGACGAGGACTG CCCGCCGCCGCCGTCGC CGTT GTGGCGGCTGCTGTGGG TTCTGATGCCCTGGG SCO4130 4545170 - 4544370 - | integral membrane protein SCO4131 4545646 - 4545338 - | integral membrane protein SCO4132 4546029 - 4547051 + | secreted transglycosylase SCO4133 4547257 - 4547973 + | integral membrane protein SCO4134 4549560 - 4547977 - | lipoprotein SCO4135 4550161 - 4551054 + | lipoprotein SCO4136 4551683 - 4551282 - | hypothetical protein SCO4137 4551891 - 4552511 + | hypothetical protein TERM 1411 4553460 - 4553487 + G 70 -12.6 -3.37796 | overlap 4553459 GTTCATCACGATGCC CGCCGCCGCGGT GGTG GCCGCGGTGTCG TTCTGGATCGTGAAC SCO4138 4552519 - 4553517 + | phosphate transport protein TERM 1412 4553543 - 4553573 + T 100 -31.2 -3.44051 | CCCAGGTACGGCGAT GGGCCCGCCCCCGG ATT CCGGGGGCGGGCCC TTGTGCTCCTCGCGG SCO4139 4554413 - 4553637 - | phosphate ABC transport system ATP-binding protein SCO4140 4555531 - 4554467 - | phosphate ABC transport system permease protein SCO4141 4556538 - 4555528 - | phosphate ABC transport system permease protein SCO4142 4557819 - 4556707 - | phosphate-binding protein precursor TERM 1413 4556833 - 4556851 + g 72 -12.4 -3.6968 | CAGGAAGGACTTGGT GGCGGGCA GGG TGTCCGCC TTGTTGCCCTTGTCG SCO4143 4558549 - 4558121 - | mutT-like protein SCO4144 4559762 - 4558596 - | hypothetical protein SCO4145 4562289 - 4559965 - | polyphosphate kinase TERM 1414 4563339 - 4563294 - g 77 -18.9 -2.78463 | ACGTCGTGCAGGAGA CCTTCCTCGCGGTGTGGCGCG GCAG CGCGCGCTACCGCGAGGAGGG GGACGTGGCGGGGTG SCO4146 4563131 - 4563673 + | ECF family RNA polymerase sigma factor SCO4147 4563670 - 4564533 + | integral membrane protein SCO4148 4564580 - 4565449 + | ABC transport system ATP-binding protein SCO4149 4565446 - 4566975 + | ABC transport system transmembrane protein SCO4150 4566999 - 4567619 + | ABC transport system transmembrane protein SCO4151 4568591 - 4567662 - | acetyltransferase SCO4152 4568800 - 4570638 + | secreted 5'-nucleotidase SCO4153 4571188 - 4570805 - | hypothetical protein SCO4154 4571295 - 4571696 + | hypothetical protein SCO4155 4573116 - 4571671 - | two-component system sensor SCO4156 4573859 - 4573113 - | two-component systen response regulator SCO4157 4574991 - 4573948 - | protease SCO4158 4576134 - 4575112 - | LacI-family regulatory protein SCO4159 4576980 - 4576177 - | transcriptional regulatory protein TERM 1415 4577176 - 4577149 - H 83 -7.7 -4.61566 | opp_overlap 4577150 CCCGAAAGCACAAAA GGACCCGGG GGCTACGTTG CCCGAGTCC TCTGCCCAGCAGAAT SCO4160 4577223 - 4578059 + | hydrolase SCO4161 4578096 - 4578350 + | molybdopterin converting factor SCO4162 4578354 - 4579667 + | integral membrane protein TERM 1416 4579745 - 4579727 - f 72 -5.8 -4.37092 | overlap 4579728 AGCTGTTCGACAAAA TCCGGGGG GTG CCACCGGC CCGCGTTACGCTCGC SCO4163 4579824 - 4580561 + | secreted protein SCO4164 4580995 - 4581840 + | thiosulfate sulfurtransferase SCO4165 4581874 - 4582161 + | hypothetical protein TERM 1417 4582218 - 4582260 + F 80 -17.9 -2.87132 | gap 2 GCCTGGGGTGCGGCC CCTTCGGCGT-G-TCCGGACC GGG GGTCCGGACCTACGCTGGAGG TATGTACGCACGGCG SCO4166 4582226 - 4582519 + | integral membrane protein SCO4167 4583216 - 4582548 - | TetR family transcriptional regulator SCO4168 4583238 - 4584065 + | oxidoreductase SCO4169 4584106 - 4584870 + | oxidoreductase TERM 1418 4585043 - 4584995 - g 72 -14.3 -3.38072 | overlap 4584991 4584996 GTCATGGAAGAGGAA CCGGCGAGACCCGCGGCACCGGC CGC GCCGACGCCACCGGACGCGCCAC AGACGGCGGCGGCCC TERM 1419 4585042 - 4584996 - g 73 -17.8 -2.62522 | overlap 4584991 4584995 TCATGGAAGAGGAAC CGGCGAGACCCGCGGCACCGGC CGC GCCGACGCCACCGGACGCGCCA CAGACGGCGGCGGCC SCO4170 4584935 - 4585840 + | hypothetical protein TERM 1420 4585874 - 4585886 + G 71 -10.5 -3.78953 | opp_overlap 4585853, overlap 4585868 GCGGGCGGGCGACCG CCGCC GCG GGCGG TTTGCTGCTGGCCGT SCO4171 4585837 - 4586589 + | secreted protein SCO4172 4586586 - 4587461 + | hypothetical protein SCO4173 4587828 - 4587481 - | hypothetical protein SCO4174 4588123 - 4587872 - | integral membrane protein SCO4175 4588512 - 4588120 - | hypothetical protein SCO4176 4588684 - 4589526 + | hypothetical protein SCO4177 4589532 - 4589801 + | hypothetical protein TERM 1421 4589785 - 4589817 + F 73 -10.4 -3.85817 | opp_overlap 4589781 4589784 TCCGGCGAGAAGAGC CGGGGCGGGCCGCG TAAGC TGAGGCCGGCCCTG TTTATGCCCCCCGCT SCO4178 4589846 - 4589944 + | small membrane protein SCO4179 4589970 - 4590545 + | hypothetical protein SCO4180 4590561 - 4590998 + | iron uptake regulatory protein SCO4181 4591019 - 4591984 + | hypothetical protein SCO4182 4592436 - 4592011 - | D-tyrosyl-tRNA deacylase SCO4183 4593478 - 4592459 - | transposase SCO4184 4593681 - 4594349 + | aerial mycelium formation protein SCO4185 4594466 - 4595476 + | hypothetical protein TERM 1422 4595489 - 4595542 + F 72 -15.9 -2.70932 | overlap 4595479 4595489 4595505 4595532 TGACGTCCGGGGCCG TCCGGGTCCTTCGGGGTCCGGGTCC TTCG GGGTCCGGATCCTTCGGGGTCCGGA TCCTTCGGAGCCGCC TERM 1423 4596824 - 4596787 - g 72 -12 -3.61398 | gap 2, opp_overlap 4596791 4596799, overlap 4596790 CGGGTGCGGGAAGAA CG-AGC-GGGCGCCGCCC GTGT GGTCGACGCCCTGCTGCG TACGTCCAGGCGGCC SCO4186 4595605 - 4596861 + | hypothetical protein SCO4187 4597225 - 4597040 - | hypothetical protein SCO4188 4597379 - 4598290 + | GntR family transcriptional regulator SCO4189 4598488 - 4598300 - | hypothetical protein SCO4190 4598629 - 4599504 + | GntR family transcriptional regulator SCO4191 4599453 - 4600274 + | hydrolase SCO4192 4600336 - 4601412 + | hypothetical protein SCO4193 4601497 - 4602498 + | ATP/GTP-binding membrane protein TERM 1424 4603026 - 4603006 - g 70 -13.9 -3.28712 | CCTCGCCCTGGACAA CTGGCGGCG GAT CGCCGCCGG GGAACGGGTGGAGGA SCO4194 4602491 - 4603132 + | TetR family transcriptional regulator SCO4195 4603165 - 4605207 + | ATP/GTP binding protein SCO4196 4606479 - 4605265 - | organophosphate acid anhydrase SCO4197 4606581 - 4607048 + | MarR family regulatory protein SCO4198 4607362 - 4607787 + | DNA-binding protein SCO4199 4607810 - 4608451 + | hypothetical protein TERM 1425 4608475 - 4608505 + F 100 -22.6 -3.31263 | opp_overlap 4608435 GCGACGAGCGGACAG CGGGCCGGGCACCC TTG GGGTGTCCGGCTCG TTCTGCGGGTACGGT SCO4200 4608559 - 4608900 + | hypothetical protein SCO4201 4610672 - 4609038 - | hypothetical protein SCO4202 4611975 - 4610815 - | NLP/P60-family secreted protein SCO4203 4612988 - 4612173 - | hypothetical protein SCO4204 4613136 - 4614626 + | glycosyltransferase SCO4205 4614619 - 4615125 + | hypothetical protein SCO4206 4615969 - 4615154 - | AraC family transcription regulator SCO4207 4616019 - 4616486 + | hypothetical protein SCO4208 4617858 - 4616569 - | integral membrane transport protein TERM 1426 4617232 - 4617258 + g 70 -12.9 -3.33696 | overlap 4617234 GACGGGCACCGCGTC CCCGCCGCCGG ACGTC TCGGCGGCGTG TTCCTTCGGCCGCGA TERM 1427 4617234 - 4617256 + g 70 -14.1 -3.23853 | overlap 4617232 CGGGCACCGCGTCCC CGCCGCCGG ACGTC TCGGCGGCG TGTTCCTTCGGCCGC SCO4209 4618020 - 4618781 + | phosphoglyceromutase TERM 1428 4618831 - 4618795 - T 76 -15.8 -3.13899 | opp_overlap 4618796, overlap 4618793 AAGCGCGCACGAACA GGCCCCCTACCTGCGG TTTCT CCGCGAGTAGGGGGCT TTGTGTTGTCGTGGG TERM 1429 4618796 - 4618830 + T 100 -19.3 -4.29304 | opp_overlap 4618795 4618793 AGCGCGCACGAACAG GCCCCCTACCTGCGG TTTCT CCGCGAGTAGGGGGC TTTGTGTTGTCGTGG SCO4210 4619375 - 4618881 - | hypothetical protein SCO4211 4620040 - 4619432 - | integrase, partial CDS SCO4212 4620305 - 4620667 + | hypothetical protein SCO4213 4621091 - 4622725 + | hypothetical protein TERM 1430 4622923 - 4622900 - T 90 -6.6 -5.08601 | opp_overlap 4622909, overlap 4622903 CCAGGGCAAGAAAAA GTAGGCCCAC CTCG GTAGGCCCCC GTCCTGCTGTTGCTC TERM 1431 4622909 - 4622961 + T 100 -23.4 -3.60098 | opp_overlap 4622903 4622900 GAAAAAGTAGGCCCA CCTCGGTAGGCCCCCGTCCTGCTG TTGCT CGGCAGGGCGGGGGCCGACTGGCG TTTCGGGTCGGCGCT SCO4214 4623433 - 4622993 - | AbaA-like regulatory protein SCO4215 4623766 - 4624524 + | GntR family regulatory protein SCO4216 4624796 - 4624587 - | hypothetical protein SCO4217 4625816 - 4624932 - | hypothetical protein SCO4218 4625975 - 4626166 + | small hydrophilic protein TERM 1432 4626553 - 4626585 + G 81 -14.1 -3.78934 | CTGGCCCGCGAACTG GCCGGGCACGGGTAC TAC GTACTCGTGCCCAAC TTCTTCTACCGGCAC SCO4219 4626394 - 4627158 + | dienelactone hydrolase family hydrolase SCO4220 4627767 - 4627348 - | hypothetical protein SCO4221 4628248 - 4627832 - | hypothetical protein SCO4222 4628357 - 4628737 + | hypothetical protein SCO4223 4629652 - 4628765 - | AraC family transcription regulator SCO4224 4630989 - 4629724 - | hypothetical protein SCO4225 4631465 - 4631073 - | integral membrane protein SCO4226 4631849 - 4631601 - | hypothetical protein SCO4227 4632216 - 4631977 - | hypothetical protein SCO4228 4632984 - 4632295 - | phosphate transport system regulator TERM 1433 4632804 - 4632823 + g 72 -13.6 -3.34233 | overlap 4632822 GGGTTATCGCCCGGG CCTCCAGC TCGT GCTGGAGG TTGTCGACCTTCTGG SCO4229 4633199 - 4634479 + | sensor kinase SCO4230 4634485 - 4635156 + | response regulator TERM 1434 4635205 - 4635233 + T 93 -21.8 -3.09516 | ACCGGACACGGCGAA GGGCGGGACCTC ACGGA GAGGTCCCGCCC TTCGGTCGTGCGCCG SCO4231 4636042 - 4635317 - | lipoprotein TERM 1435 4636254 - 4636280 + H 79 -13.6 -3.65046 | GCCCAGGGCGCCGTT CCCGCACGGGCG GGG CGCCCGTACGCG TTGTTCCGGTGGGCC SCO4232 4636744 - 4637226 + | transcriptional factor regulator TERM 1436 4637283 - 4637333 + F 87 -20.4 -3.14132 | opp_overlap 4637285, overlap 4637285 4637330 GGTTCAGCGCACTGA AATGCCGCGGTGCCCGATGACATC CTT GCTGTCGCCGGGCGCTGCGGCATG TTCGTACCCGGACAC TERM 1437 4637331 - 4637285 - f 91 -18.6 -3.65902 | opp_overlap 4637283 4637285 4637330 TTCAGCGCACTGAAA TGCCGCGGTGCCCGATGACATC CTT GCTGTCGCCGGGCGCTGCGGCA TGTTCGTACCCGGAC TERM 1438 4637285 - 4637331 + F 100 -23 -3.13403 | opp_overlap 4637285, overlap 4637283 4637330 TTCAGCGCACTGAAA TGCCGCGGTGCCCGATGACATC CTT GCTGTCGCCGGGCGCTGCGGCA TGTTCGTACCCGGAC SCO4233 4637542 - 4638354 + | 4-diphodphocytidyl-2C-methyl-D-erythriol synthase ispF 4638344 - 4638856 + | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase cysS 4638881 - 4640722 + | cysteinyl-tRNA synthetase TERM 1439 4641188 - 4641154 - g 70 -13.4 -3.36327 | GCAGTTCATCGACAA CGACGAGCGGGTGCGC GAG GCCCTCCAGCTCGCCG CCGAGCGCGGTGGCA TERM 1440 4641608 - 4641562 - g 81 -16.4 -3.45023 | GGAGCAGTACCAGAA GGCCGGCATCACGGTCGTCGGC CTC GCCGCCGACGGCGAGGCCGAAC TCGGCGACCTGGCGG SCO4236 4640855 - 4641799 + | tRNA/rRNA methyltransferase TERM 1441 4642233 - 4642197 - g 76 -17.9 -2.79183 | CCGACCCGGACGACA CCGGCGCGCACCGGCTG CTC CAGGCGGTGCGGGCGGG AGCCGGTCAGTACGC SCO4237 4641923 - 4643638 + | integral membrane protein TERM 1442 4643668 - 4643700 + T 100 -28.5 -2.78816 | opp_overlap 4643668 CCGCGCGGTACGACA GCGGGGCCCCGCACG GGA TGTGCGGGGCCCCGC TGTCGTACGGCATGG TERM 1443 4643700 - 4643668 - T 100 -27.8 -2.78384 | opp_overlap 4643668 CCGCGCGGTACGACA GCGGGGCCCCGCAC GGGAT GTGCGGGGCCCCGC TGTCGTACGGCATGG SCO4238 4644464 - 4643727 - | guanyltransferase SCO4239 4644952 - 4644506 - | small membrane protein TERM 1444 4645139 - 4645102 - R 100 -26.5 -3.29511 | opp_overlap 4645108 4645138, overlap 4645108 GGTATTTGTCGACAA CGAAAAGAGCCCCGCAG CAGG CCGCGGGGCTCTTTTCG TCAACGCGGGTGAAA TERM 1445 4645108 - 4645133 + r 95 -16.1 -4.25104 | opp_overlap 4645102 4645108 TGTCGACAACGAAAA GAGCCCCGCAG CAGG CCGCGGGGCTC TTTTCGTCAACGCGG TERM 1446 4645133 - 4645108 - R 100 -18.3 -4.48987 | opp_overlap 4645108, overlap 4645102 TGTCGACAACGAAAA GAGCCCCGCAG CAGG CCGCGGGGCTC TTTTCGTCAACGCGG SCO4240 4646311 - 4645175 - | ABC transporter ATP-binding protein TERM 1447 4646617 - 4646657 + r 100 -38.5 -3.14211 | opp_overlap 4646576 GCTCCGCAGCCGGCC CGCCGACGCCCCCGCGATC CTG GATCGCGGGGGCGTCGGCG TTGGTCCGGGGCGCT SCO4241 4648308 - 4646671 - | proteinase SCO4242 4649833 - 4648427 - | hypothetical protein SCO4243 4650402 - 4649830 - | secreted protein SCO4244 4652357 - 4650399 - | hypothetical protein SCO4245 4652809 - 4652357 - | hypothetical protein SCO4246 4654775 - 4652844 - | hypothetical protein SCO4247 4655497 - 4654775 - | hypothetical protein SCO4248 4655948 - 4655526 - | hypothetical protein TERM 1448 4656425 - 4656460 + G 100 -28.4 -2.62184 | opp_overlap 4656406 GGACCGGCGGCATGT CGCCGGACACGGCGCC GGGC GGTGCCGTGTCCGGCG TGGTGTCCGCGGGCC SCO4249 4656193 - 4656891 + | hypothetical protein TERM 1449 4657033 - 4656985 - g 100 -24.6 -3.32844 | gap 2 GCGCCGAGCGGAGAA CGACG--CGCGGGCGCCCCGGCCG GGG CGGCCGGGGCGGCCGGGGACGTCG GTGTCGGAGCCGGTG TERM 1450 4657118 - 4657166 + G 83 -20.2 -2.82635 | AGGTGGGCGCGCCGA GCCCCGGACGCCGCCCG-GCCGCG CTG CGCTGCACGGGGGTCG-CCGGGGC TGTCGTCCTGCCGGT TERM 1451 4657343 - 4657394 + G 70 -14.2 -3.28712 | gap 1 GCGCGATCGGGTCGT CCGTGCGCCGCTCCGACGCCCGCTG GAC CGGCGGTAGT-GGTGCGCCGCCCGG TTGTGCCGAGGACGG SCO4250 4656901 - 4660236 + | hypothetical protein SCO4251 4660813 - 4660280 - | secreted protein SCO4252 4661262 - 4660813 - | hypothetical protein SCO4253 4662919 - 4661315 - | hypothetical protein SCO4254 4663249 - 4666119 + | hypothetical protein TERM 1452 4666155 - 4666174 + F 75 -16.4 -3.01712 | TGTCCGGACGCGACC CCGGGGGC CGTT GCCCCCGG TGTTGCCCGCGCAGA SCO4255 4666257 - 4666985 + | hypothetical protein SCO4256 4667076 - 4668515 + | hydrolytic protein SCO4257 4668591 - 4670033 + | hydrolytic protein SCO4258 4670132 - 4671589 + | hydrolytic protein TERM 1453 4671630 - 4671583 - T 75 -12.4 -3.65522 | CATCCACCCGAAGAA GGGCTGACGGCCGGAGGGGGCC CGGC GGCCGTCACCAGCCGCCTTCCC CCGGTACCAGCCTCC SCO4259 4673686 - 4671614 - | AAA ATPase family protein TERM 1454 4673009 - 4672967 - G 78 -17.6 -3.14344 | CAGGCGCCGGACGAA GACGTCGGTGTCGCCGCCCG CGG CGGGCAGCGATCCCGGCATC GGGAGCAGCAGGCCG SCO4260 4674369 - 4673692 - | hypothetical protein SCO4261 4675222 - 4674563 - | response regulator TERM 1455 4675432 - 4675396 - g 72 -17.1 -2.84812 | AGGCACACCACGAGA CCAGCGTGCCGACCGCC GCA GGCGGCCGTCGCGCGGG CGTCCCGGCAGGCCG SCO4262 4675239 - 4675586 + | hypothetical protein TERM 1456 4676716 - 4676770 + G 82 -19.3 -3.05384 | overlap 4676725 GGCGTCGCCGTGGCA CGGCGCGGACCGGCAGG-CCTCGCTGT CGG ACGGCGCGGACCGGCCGGTTT-CGCCG TTCGGTACCGGGGAC TERM 1457 4676725 - 4676762 + G 83 -15.5 -3.61268 | gap 1, overlap 4676716 GTGGCACGGCGCGGA CCGGCAGG-CCTCGCTGT CGG ACGGCGCGGACCGGCCGG TTTCGCCGTTCGGTA SCO4263 4675583 - 4679338 + | transcriptional regulatory protein SCO4264 4680236 - 4679364 - | aminoglycoside phosphotransferase SCO4265 4681806 - 4680295 - | transport integral membrane protein SCO4266 4682866 - 4681886 - | oxidoreductase SCO4267 4684078 - 4682918 - | hypothetical protein SCO4268 4684159 - 4684947 + | hypothetical protein SCO4269 4685459 - 4684959 - | hypothetical protein SCO4270 4686242 - 4685643 - | transcriptional regulator SCO4271 4686358 - 4687494 + | NADP-dependent alcohol dehydrogenase SCO4272 4687504 - 4688475 + | mutT-like protein SCO4273 4689921 - 4688500 - | metallopeptidase SCO4274 4690572 - 4690003 - | secreted protein SCO4275 4690823 - 4692109 + | histidine autokinase SCO4276 4692106 - 4692777 + | response regulatory protein TERM 1458 4692861 - 4692819 - T 100 -23.5 -3.05384 | gap 1, opp_overlap 4692826 GCCCGTCCGACGGAA CGC-CGAAGGCCCCCCGGCC GGAC GTCCGGGGGGCCTTCGTACG GAACCGACGGGCGGG TERM 1459 4692826 - 4692853 + T 87 -19.8 -3.14132 | opp_overlap 4692819 CGACGGAACGCCGAA GGCCCCCCGGCC GGAC GTCCGGGGGGCC TTCGTACGGAACCGA SCO4277 4693458 - 4692883 - | tellurium resistance protein SCO4278 4693616 - 4694053 + | hypothetical protein SCO4279 4694541 - 4694071 - | acetyltransferase SCO4280 4695200 - 4694592 - | reductase SCO4281 4695536 - 4697197 + | hypothetical protein SCO4282 4697318 - 4698292 + | dimeric protein SCO4283 4699275 - 4698343 - | sugar kinase SCO4284 4700543 - 4699398 - | N-acetylglucosamine-6-phosphate deacetylase SCO4285 4701523 - 4700543 - | sugar kinase SCO4286 4701671 - 4702936 + | solute-binding protein (secreted protein) SCO4287 4702952 - 4703206 + | hypothetical protein SCO4288 4703578 - 4704450 + | phosphatase SCO4289 4704590 - 4705072 + | secreted protein SCO4290 4706467 - 4705079 - | trehalose-phosphate synthase SCO4291 4706614 - 4707315 + | secreted protein SCO4292 4708283 - 4707339 - | hypothetical protein SCO4293 4708607 - 4709893 + | threonine synthase SCO4294 4709890 - 4710165 + | hypothetical protein TERM 1460 4710195 - 4710227 + F 76 -15.7 -3.16267 | ACCTGGTAGTGCGTA TTGCCCTCTCCGT GAGAGAA ACGGAGGGGGCAA TTCCATGTGGTTGAG SCO4295 4710584 - 4710787 + | cold shock protein TERM 1461 4711254 - 4711240 - g 74 -11.4 -3.78934 | CGTCCTCGAGAAGAA GTGGGG CGC CCCCAC GATCACCAACGATGG TERM 1462 4712710 - 4712677 - g 70 -13.7 -3.30124 | overlap 4712686 4712687 CGTCATCGCCGACAA GCCCGAGAAGGCCGC TCCG GCGGGCGCCCCGGGC GGCATGCCGGGTGGT groEL 4711115 - 4712740 + | chaperonin GroEL SCO4297 4712991 - 4714121 + | oxidoreduxtase SCO4298 4714155 - 4715696 + | carboxylesterase SCO4299 4715693 - 4716040 + | integral membrane protein SCO4300 4716272 - 4716003 - | hypothetical protein SCO4301 4717095 - 4716256 - | DNA-binding protein TERM 1463 4716486 - 4716520 + g 70 -2.6 -4.4009 | opp_overlap 4716463 4716496 TGGCCGGATGCGCTC CCGCCTCAAAGGGCAG TAC CTGCACGATGACCCGG TTTTCTCGCATGAGG SCO4302 4717214 - 4717603 + | secreted protein SCO4303 4718222 - 4717614 - | transcriptional regulator SCO4304 4718317 - 4719066 + | oxidoreductase SCO4305 4719673 - 4719080 - | hypothetical protein SCO4306 4720244 - 4719675 - | hypothetical protein murQ 4721247 - 4720312 - | N-acetylmuramic acid-6-phosphate etherase SCO4308 4722308 - 4721346 - | transcriptional regulator SCO4309 4722391 - 4722771 + | hypothetical protein SCO4310 4722782 - 4723078 + | hypothetical protein SCO4311 4724157 - 4723060 - | hypothetical protein SCO4312 4724956 - 4724168 - | hypothetical protein SCO4313 4724955 - 4725605 + | regulatory protein SCO4314 4725616 - 4726299 + | hypothetical protein SCO4315 4726384 - 4727073 + | homeostasis protein SCO4316 4729279 - 4727234 - | ATP/GTP binding protein TERM 1464 4729406 - 4729425 + H 74 -4.8 -4.59773 | opp_overlap 4729403 GATTCTAAGGCAGCG CGGGCGGC ACGG GCCAACCG TTTTTCACCCTCCCG SCO4317 4729548 - 4729769 + | hypothetical protein SCO4319 4731672 - 4731490 - | integral membrane protein SCO4320 4731893 - 4731774 - | hypothetical protein TERM 1465 4732010 - 4731974 - R 91 -2.9 -5.27779 | gap 2 CGGAATATGAAAAAA GCTC-CCTCGC-AGGTG CGAAT CACCCGGCGTGGCGTGC ATGAACCACCGCGTA SCO4321 4734673 - 4732070 - | hypothetical protein SCO4322 4734723 - 4735823 + | integral membrane protein SCO4324 4737265 - 4736987 - | integral membrane protein SCO4323 4736376 - 4737038 + | hydrolase TERM 1466 4737821 - 4737779 - g 86 -16.3 -3.61715 | gap 1, opp_overlap 4737782, overlap 4737767 4737766 4737764 4737782 GACGGCCGGCAAGAA GATCGCCGGGCTGCTCCGCG CGGT CGCGGACCAGCTCGACG-TC TGATCTCCTCGCCCC TERM 1467 4737819 - 4737782 - g 76 -19.1 -2.63073 | opp_overlap 4737782, overlap 4737767 4737766 4737764 4737779 GGCCGGCAAGAAGAT CGCCGGGCTGCTCCGCG CGGT CGCGGACCAGCTCGACG TCTGATCTCCTCGCC TERM 1468 4737782 - 4737819 + G 79 -19.1 -2.87468 | opp_overlap 4737767 4737766 4737764 4737779 4737782 GGCCGGCAAGAAGAT CGCCGGGCTGCTCCGCG CGGT CGCGGACCAGCTCGACG TCTGATCTCCTCGCC SCO4325 4737441 - 4737824 + | cold shock protein B SCO4326 4738692 - 4737844 - | hypothetical protein SCO4327 4739311 - 4738682 - | hypothetical protein SCO4328 4739869 - 4739405 - | lipoprotein SCO4329 4741364 - 4739973 - | integral membrane protein SCO4330 4741698 - 4742624 + | hypothetical protein SCO4331 4742777 - 4745905 + | hypothetical protein SCO4332 4748436 - 4746028 - | integral membrane ATPase SCO4333 4748796 - 4748536 - | integral membrane protein TERM 1469 4748986 - 4748943 - H 70 -4.4 -4.38712 | overlap 4748958 4748964 TTCATTCGTAGAAAA CACCAATAGGAACACCGACA AGGC CGTGGGGGAACCTGTTGGTG ATGAGGTCCCCGCAT SCO4334 4749000 - 4750457 + | integral membrane protein SCO4335 4750677 - 4750489 - | hypothetical protein TERM 1470 4750554 - 4750598 + g 71 -7.9 -4.08945 | gap 1, opp_overlap 4750563, overlap 4750556 4750557 GCTCGTCGAAGTCGT CTCGAATGAGCGTCC-GGAC GACATA GTCCTGGACGCTCATTCCTC TTTTGGCCGCATGGT TERM 1471 4750556 - 4750596 + g 83 -14.9 -3.6422 | gap 1, opp_overlap 4750563, overlap 4750554 4750557 TCGTCGAAGTCGTCT CGAATGAGCGTCC-GGAC GACATA GTCCTGGACGCTCATTCC TCTTTTGGCCGCATG TERM 1472 4750557 - 4750595 + g 77 -18.4 -2.78211 | gap 1, opp_overlap 4750563, overlap 4750556 4750554 CGTCGAAGTCGTCTC GAATGAGCGTCC-GGAC GACATA GTCCTGGACGCTCATTC CTCTTTTGGCCGCAT SCO4336 4750828 - 4751265 + | marR-family protein SCO4337 4751293 - 4752672 + | integral membrane efflux protein SCO4338 4752722 - 4753294 + | hypothetical protein SCO4339 4754290 - 4753436 - | reductase TERM 1473 4755109 - 4755099 - g 74 -8.2 -4.11216 | TCCGCAGCGGCAAAA CCCC GAA GGGG AGCCGCTGGACCGCC SCO4340 4754366 - 4756015 + | integrase TERM 1474 4756031 - 4756066 + F 91 -17.6 -3.89346 | gap 1, overlap 4756032 CCGGCAACTGCAGGT GGCG-AGGAGGGCCCTG TGT CGGGGCCCTCCTGCGCG TTTGTAGGATGCCCG TERM 1475 4756032 - 4756065 + F 90 -21.1 -2.93393 | gap 1, overlap 4756031 CGGCAACTGCAGGTG GCG-AGGAGGGCCCTG TGT CGGGGCCCTCCTGCGC GTTTGTAGGATGCCC SCO4341 4756150 - 4756464 + | hypothetical protein SCO4342 4756861 - 4757403 + | hypothetical protein TERM 1476 4757456 - 4757477 + T 84 -13.7 -3.92075 | overlap 4757448 TTTCGGCGTCGCGGG GGCGTCCGC CCCA GCGGATGCC TTTCTCGCTGCGGAT SCO4343 4757633 - 4757436 - | hypothetical protein SCO4344 4758560 - 4757715 - | transposase SCO4345 4759042 - 4759623 + | hypothetical protein SCO4346 4761000 - 4759891 - | hypothetical protein SCO4347 4761673 - 4761245 - | hypothetical protein SCO4348 4763841 - 4761670 - | hypothetical protein TERM 1477 4762618 - 4762598 - G 81 -14.7 -3.83026 | opp_overlap 4762597 4762593 CGGCGGGAGACCAAA CGGTAGCGG GTG CCGCCACCG GTCCGTTCTTCCTGC SCO4349 4765553 - 4763838 - | hypothetical protein SCO4350 4766905 - 4765553 - | integrase SCO4351 4767115 - 4767627 + | DNA invertase SCO4352 4767684 - 4768676 + | oxidoreductase TERM 1478 4768690 - 4768747 + T 75 -12.7 -3.60296 | gap 1, overlap 4768677 4768689 4768692 GAGGTAGCGGGTCTG TGG-GGGGCCGTTGCCTTCTGCTTGCGT TCG AAGCGAGTTGGAGGCGGCGGCCTCGTCA TTTCCACTCGGGATC SCO4353 4768972 - 4768814 - | hypothetical protein SCO4354 4769703 - 4769020 - | hypothetical protein SCO4355 4769704 - 4770477 + | nucleotidyltransferase SCO4356 4771139 - 4770450 - | hypothetical protein SCO4357 4771195 - 4772241 + | integral membrane protein SCO4358 4773021 - 4772215 - | tetR family transcriptional regulatory protein TERM 1479 4773089 - 4773050 - H 100 -13.6 -4.56597 | opp_overlap 4773059 GTCCGCGCCGAAAAA CTGAGTACGGCGTACGCG CAAT CGGGTACGGTGTACTCAG TAAGGGAACGGAAGG TERM 1480 4773987 - 4774030 + G 82 -18.3 -3.14051 | gap 2, opp_overlap 4774001, overlap 4773984 CCAGGACGAGGGCGT CGCCGTCGAGGACATCGGCCT GCGC AGGCCGA-G-CCTCGACGACG TGTTCCTGCGCCTGA SCO4359 4773118 - 4774128 + | ABC transport system ATP-binding protein SCO4360 4774125 - 4774967 + | ABC transport system integral membrane protein SCO4361 4775082 - 4775639 + | integral membrane protein SCO4362 4775642 - 4776853 + | two component system sensor kinase SCO4363 4776850 - 4777530 + | two component system response regulator SCO4364 4777590 - 4777967 + | hypothetical protein TERM 1481 4777968 - 4777987 + F 72 -16.4 -2.82015 | opp_overlap 4777963, overlap 4777969 GTCGAACCGATGTAG CCCGGCGG GCCC CCGCCGGG TGTCCTCCGTCTGGC TERM 1482 4778169 - 4778207 + G 100 -28.2 -2.74012 | overlap 4778156 GGTCCCACGGATGCG CGCAGGGCGCCCGGCGGA TGA TTCGCCGGGCGCCCTCCG TCGTTGGACTCGTGG SCO4365 4778003 - 4778245 + | hypothetical protein SCO4366 4779320 - 4778229 - | phosphoserine aminotransferase SCO4367 4779458 - 4782313 + | oxidoreductase SCO4368 4783492 - 4782332 - | lipase (secreted protein) SCO4369 4783583 - 4785205 + | hypothetical protein SCO4370 4785438 - 4786457 + | transposase SCO4371 4786553 - 4787116 + | hypothetical protein SCO4372 4787774 - 4787160 - | hypothetical protein SCO4373 4788393 - 4787839 - | mut-like protein SCO4374 4788577 - 4789464 + | integral membrane protein SCO4375 4789565 - 4790059 + | MarR family regulatory protein SCO4376 4790056 - 4790565 + | hypothetical protein SCO4377 4790669 - 4792411 + | serine-threonine protein kinase SCO4378 4792544 - 4793374 + | hypothetical protein SCO4379 4793371 - 4795047 + | hypothetical protein SCO4380 4795085 - 4796683 + | acetyl/propionyl CoA carboxylase, beta subunit SCO4381 4796697 - 4798541 + | acetyl/propionyl CoA carboxylase, alpha subunit TERM 1483 4798770 - 4798714 - g 71 -9.3 -3.86202 | gap 1 GCCGAGGACAGCAAA CGCCTCTGGCAGGACGCGGCCAA-GC TCGGCT ACATCGGCGTCAACCTGCCGGAGGCG TACGGCGGAGGCGGC SCO4382 4798612 - 4799760 + | acyl CoA dehydrogenase SCO4383 4799896 - 4801464 + | 4-coumarate:CoA ligase SCO4384 4801461 - 4802204 + | enoyl-CoA hydratase TERM 1484 4802282 - 4802251 - g 74 -18 -2.70932 | gap 1 GCGCGTGCCCAAGCA GGA-CCGCAGCCGGG CCA CCCGGCAGCGGCTCC TGGAAGCCGCCGTGG SCO4385 4802213 - 4802821 + | TetR family transcriptional regulator SCO4386 4802849 - 4803460 + | hypothetical protein SCO4387 4804183 - 4803479 - | pyridoxamine oxidase SCO4388 4804464 - 4805564 + | citrate synthase 2 SCO4389 4805897 - 4806772 + | acetyltransferase SCO4390 4806938 - 4808341 + | hypothetical protein SCO4391 4808785 - 4808387 - | hypothetical protein SCO4392 4808960 - 4809685 + | esterase TERM 1485 4809877 - 4809906 + T 73 -15.1 -3.20723 | gap 1, opp_overlap 4809876 4809873 CGGCGGTAGAAGATG CGCTCGCCGTACTG CTC CAGTACG-CGGGCG TTCCATTCGTGGCCG SCO4393 4810613 - 4809858 - | hypothetical protein SCO4394 4810836 - 4811528 + | iron repressor TERM 1486 4811751 - 4811711 - f 84 -19 -2.87931 | gap 1, opp_overlap 4811718 GGCATGCCGGAGAGA CGGAGAGGGCCCCGGCGCC GTGT GGCGCCGGGGCC-TGTCCT CCCCTGTGCTGACCT TERM 1487 4811718 - 4811745 + F 95 -25.6 -2.80443 | opp_overlap 4811711 CGGAGAGACGGAGAG GGCCCCGGCGCC GTGT GGCGCCGGGGCC TGTCCTCCCCTGTGC SCO4395 4811888 - 4812946 + | hydrolase SCO4396 4814606 - 4812954 - | integral membrane transport protein SCO4397 4815394 - 4814603 - | ABC transport system ATP-binding protein SCO4398 4816163 - 4815510 - | hypothetical protein SCO4399 4816468 - 4817853 + | hypothetical protein SCO4400 4818113 - 4819708 + | hypothetical protein TERM 1488 4819707 - 4819762 + T 86 -20.2 -2.87211 | gap 1, opp_overlap 4819688 4819675, overlap 4819726 AGCCCACCCAGCTGT GAGCCGGCCGGCCCGGGCGGCCGCCCG GGC CGGACGGTC-CCCGGGCCCCCGGGCCC TGTCTCAGGCCACGT SCO4401 4821083 - 4819767 - | lipoprotein SCO4402 4821200 - 4821700 + | hypothetical protein purU 4821748 - 4822641 + | formyltetrahydrofolate deformylase SCO4404 4823471 - 4822683 - | ABC transport system integral membrane protein SCO4405 4824442 - 4823468 - | ABC transport system ATP-binding protein SCO4406 4825120 - 4824455 - | hypothetical protein TERM 1489 4825294 - 4825268 - H 71 -6.6 -4.17048 | CGGTCTGTAAAACAA TGCAACGCCA GATCAGT TGTCGTTGCA ATGGAGTGAGAGTGA TERM 1490 4825964 - 4825917 - g 71 -13.2 -3.53012 | gap 1, overlap 4825918 TTCTGGTGGCCGAAA CCGCACGCCAGGGCGTCGGCGTC CTG GGCTCCGGCACCCCGGCG-GCCG AGCGCCTGGAGAACA SCO4407 4825352 - 4826125 + | hypothetical protein SCO4408 4827368 - 4826082 - | hypothetical protein SCO4409 4827958 - 4827365 - | RNA polymerase sigma factor SCO4410 4828287 - 4828667 + | anti anti sigma factor SCO4411 4828773 - 4829285 + | calcium binding protein SCO4412 4829856 - 4830347 + | regulatory protein SCO4413 4831684 - 4830650 - | AraC family transcription regulator SCO4414 4831769 - 4833094 + | integral membrane transport protein SCO4415 4833116 - 4833988 + | integral membrane protein SCO4416 4835376 - 4834171 - | monooxygenase SCO4417 4835476 - 4836093 + | acetyltransferase SCO4418 4836769 - 4836101 - | oxidase SCO4419 4837208 - 4836783 - | hypothetical protein SCO4420 4837226 - 4837537 + | hypothetical protein SCO4421 4838192 - 4837557 - | TetR family transcriptional regulator SCO4422 4838327 - 4839085 + | hydrolase TERM 1491 4841715 - 4841676 - g 89 -20 -3.31144 | gap 1 CCTGGACGCGGAGAA GGGCACGGGGACCGCCCGT ACG ACGTGAGG-CCCCGTGCCC GGCCGGTGACGTGTC SCO4423 4839304 - 4841703 + | serine/threonine protein kinase (fragment) SCO4424 4841760 - 4842290 + | secreted protein SCO4425 4842573 - 4842382 - | sigma-like protein TERM 1492 4842649 - 4842610 - R 82 -18.6 -3.19463 | gap 1 GTGACGAGGTAGCAA CGCCCGTCCGGTAG-CTCC CCC GTAGGCTGCCGGACGGGCG CGCGGAGCCGCACAC SCO4426 4845768 - 4842787 - | regulatory protein TERM 1493 4843312 - 4843294 - G 70 -13.8 -3.30771 | opp_overlap 4843291 4843288 GGAGAGGTTCGACAA CGCGGACG CCT CGCCCGCG CGGTTGTCCGTTGCC SCO4427 4846281 - 4845862 - | hypothetical protein SCO4428 4847875 - 4846352 - | secreted protein TERM 1494 4848184 - 4848145 - g 71 -12.9 -3.53012 | gap 2, overlap 4848146 CGTCGCGCCCTCAAA CGCGCCCGGGACGGCGTCG CCCT CGACGC-GTCCGAGGC-CG CCGTGCTGCTCCAGG TERM 1495 4848798 - 4848744 - g 83 -17.7 -3.32844 | gap 1 CGGCTCACCCGACAA GGAGCCCGCCGTACGCCTGCGCGTCC TGGA GGACGC-CGGGCGCTCGTCGGTCCCC TTCACCTCCGGCATC fbiC 4848064 - 4850667 + | FO synthase TERM 1496 4850908 - 4850958 + G 72 -17 -2.80816 | gap 3, opp_overlap 4850909 4850911, overlap 4850912 ACCCCACGCCGAAGG AGACCGCGCCGGCCCCGGTGCCGGA GGGC TCCGGCACCG-G-TCGGCGCG-TCG TCTACTCGGTCGGCG TERM 1497 4850957 - 4850909 - g 77 -18.3 -2.72344 | gap 3, opp_overlap 4850908 4850912, overlap 4850911 CCCCACGCCGAAGGA GACCGCGCCGGCCCCGGTGCCGGA GGGC TCCGGCACCG-GTC-GGCGC-GTC GTCTACTCGGTCGGC TERM 1498 4850956 - 4850911 - g 76 -17.6 -2.90723 | gap 2, opp_overlap 4850908 4850912, overlap 4850909 CCACGCCGAAGGAGA CCGCGCCGGCCCCGGTGCCGGA GGGC TCCGGCACCG-GTC-GGCGCGT CGTCTACTCGGTCGG TERM 1499 4850912 - 4850955 + G 89 -23.3 -2.66964 | gap 2, opp_overlap 4850911 4850909, overlap 4850908 CACGCCGAAGGAGAC CGCGCCGGCCCCGGTGCCGGA GGGC TCCGGCACCG-G-TCGGCGCG TCGTCTACTCGGTCG TERM 1500 4851109 - 4851067 - g 76 -17.6 -2.90194 | ACCCCGGCAAGTACA GCGTCGGCACCCGCCGCCAG GAC CCGACGACGGGCTCCGACGG GGTCAGGATCGAGCA SCO4430 4850736 - 4851305 + | secreted protein SCO4431 4851852 - 4851343 - | integral membrane protein SCO4432 4851904 - 4852578 + | hypothetical protein SCO4433 4853044 - 4852634 - | integral membrane protein SCO4434 4853069 - 4853965 + | LysR family transcriptional regulator TERM 1501 4854586 - 4854547 - g 83 -15.7 -3.62046 | gap 2 CGAGGCGCCCAAGAA CCCCG-GCGAGC-GCGGCC CCGA GGCCGCCGCCCGCTCGGCG CCGTTCGGACTCCTG SCO4435 4854071 - 4855186 + | hypothetical protein SCO4436 4855250 - 4855660 + | lyase SCO4437 4857491 - 4855908 - | sodium-coupled permease SCO4438 4859604 - 4857727 - | integral membrane protein TERM 1502 4859492 - 4859443 - G 78 -17.7 -3.15544 | gap 1 GCGCAGGGCCAGGAA GGCGGCGTTCA-CCGCCGAGGGCG CTT CCCGCTCGGCGGGCGGCCGCCGCC CGGCAGGCAGGGACT SCO4439 4862311 - 4859813 - | D-alanyl-D-alanine carboxypeptidase TERM 1503 4863095 - 4863052 - g 70 -14.5 -3.28416 | gap 1 CAGCAGGGAGATCAA GGCCCGGCTGGAC-TCGGCG ATCCG CACCGGCGTCCCGCCGGACC CGCGGACCGCGGCGC TERM 1504 4863286 - 4863256 - g 70 -13.3 -3.31461 | gap 1 GATGGACGTCCAGAA CGGCGCTGCGGCAC AGCC ACGCCGCAGC-CCG GCCCCGGCCGGCCGC SCO4440 4862642 - 4863400 + | hypothetical protein SCO4441 4863620 - 4864507 + | DNA-binding protein SCO4442 4864681 - 4864872 + | hypothetical protein SCO4443 4865850 - 4864966 - | merR family transcriptional regulator SCO4444 4866505 - 4865924 - | glutathione peroxidase SCO4445 4867625 - 4866642 - | transcriptional regulator SCO4446 4867733 - 4868950 + | integral membrane protein SCO4447 4869137 - 4870225 + | integral membrane protein SCO4448 4870987 - 4870304 - | hypothetical protein SCO4449 4871941 - 4871042 - | hydrolase SCO4450 4872011 - 4872658 + | TetR family transcriptional regulator SCO4451 4872768 - 4874393 + | export protein SCO4452 4875516 - 4874365 - | RNA polymerase sigma factor SCO4453 4875932 - 4875525 - | hypothetical protein SCO4454 4876625 - 4876023 - | transcriptional regulator SCO4455 4876807 - 4877370 + | integral membrane protein SCO4456 4877431 - 4879017 + | membrane-associated oxidoreductase SCO4457 4880076 - 4879075 - | integral membrane protein SCO4458 4880974 - 4880330 - | lipoprotein TERM 1505 4881105 - 4881067 - R 76 -16.7 -2.71144 | gap 2, opp_overlap 4881058 GAGCGTGCGGAAGCA CGGCACCCG-GCA-CCGGC AGG GCCGGACGCACGGGAGCCG GGCGGGCCGCTCTAT SCO4459 4881521 - 4881117 - | hypothetical protein TERM 1506 4881477 - 4881498 + g 73 -17.3 -2.50113 | opp_overlap 4881445 4881479, overlap 4881476 4881479 CACCAGCAGCGCGAA CAGCCGCCC GGCC GGGCGGCTG CTTGATCCGGTGCTC SCO4460 4881544 - 4882014 + | hypothetical protein SCO4461 4882589 - 4882032 - | TetR family transcriptional regulator SCO4462 4882715 - 4883962 + | integral membrane protein SCO4463 4883959 - 4884108 + | hypothetical protein SCO4464 4884893 - 4884219 - | hydrolase SCO4465 4884932 - 4885462 + | hypothetical protein SCO4466 4886016 - 4885528 - | hypothetical protein SCO4467 4886504 - 4886067 - | hypothetical protein SCO4468 4886701 - 4886495 - | hypothetical protein TERM 1507 4886540 - 4886580 + g 85 -19.6 -3.002 | CCGCCCCCAGCCGGT CGGCCCGCCGGTCGAGCC GGTCG GGCTCGCCCGGGGTGCCG TGTGTCTGACGTGCT SCO4469 4886990 - 4888306 + | glutamate-1-semialdehyde aminotransferase SCO4470 4888303 - 4889004 + | phosphoglycerate mutase TERM 1508 4889002 - 4889046 + F 79 -16.9 -3.03525 | overlap 4889012 4889014 AAGGCGTACGGGGCC TGACGGTCGCCCGGGCCCCGG GCC CCGGGGCCCGGGCCCAGGTCC CTTTCTGTGGGTCCG TERM 1509 4889012 - 4889043 + F 79 -18.6 -2.73797 | overlap 4889002 4889014 GGGCCTGACGGTCGC CCGGGCCCCGGGCC CCGG GGCCCGGGCCCAGG TCCCTTTCTGTGGGT TERM 1510 4889014 - 4889047 + F 90 -15.9 -4.0641 | gap 1, overlap 4889012 4889002 GCCTGACGGTCGCCC GGGCCCCGGGCCCCGG GGC CCGGG-CCCAGGTCCC TTTCTGTGGGTCCGC SCO4471 4889161 - 4890459 + | secreted protein SCO4472 4890549 - 4891220 + | secreted protein SCO4473 4891231 - 4891992 + | cytochrome biogenesis related protein SCO4474 4891996 - 4893720 + | integral membrane protein SCO4475 4893909 - 4895051 + | cytochrome biogenesis related protein TERM 1511 4895114 - 4895056 - T 100 -26.9 -3.14132 | gap 1, opp_overlap 4895068, overlap 4895068 TCGGCTTCTGATCAA GGCACGGCCAAAGGCCGGTTCCCGTGAC CCAG GTCACCGGGACCGGCCTTTCGC-GTGCC GTCCGGCCCCGACGC TERM 1512 4895103 - 4895068 - T 95 -19 -3.58269 | opp_overlap 4895068, overlap 4895056 CAAGGCACGGCCAAA GGCCGGTTCCCGTGAC CCAG GTCACCGGGACCGGCC TTTCGCGTGCCGTCC TERM 1513 4895068 - 4895103 + T 100 -21.2 -3.60627 | opp_overlap 4895068 4895056 CAAGGCACGGCCAAA GGCCGGTTCCCGTGAC CCAG GTCACCGGGACCGGCC TTTCGCGTGCCGTCC SCO4476 4896619 - 4895198 - | hypothetical protein SCO4477 4897511 - 4896795 - | MerR family transcriptional regulator SCO4478 4897544 - 4898155 + | transferase TERM 1514 4898162 - 4898204 + T 80 -18.4 -2.87132 | opp_overlap 4898164 4898191 CGGGGCTGACGGGAA GAGGCCCTGGGTCGTGGC GGGGGAA GCCACGGCCCAGGGCCGG TCTGTGGGGGCAGCG TERM 1515 4898202 - 4898164 - T 100 -23.2 -3.05844 | opp_overlap 4898162, overlap 4898191 GGGCTGACGGGAAGA GGCCCTGGGTCGTGGC GGGGGAA GCCACGGCCCAGGGCC GGTCTGTGGGGGCAG SCO4479 4899117 - 4898224 - | secreted hydrolase SCO4480 4899918 - 4899301 - | TetR family transcriptional regulator SCO4481 4900077 - 4901975 + | serine/threonine protein kinase (fragment) SCO4482 4902832 - 4901972 - | LysR family transcriptional regulator TERM 1516 4902991 - 4902960 - g 79 -12.8 -3.87737 | overlap 4902951 GAGAAACAGCAAGAA CGCCGAGCACGGCG AGCA CGCCGAGCACGCCG AGGCGGGCGCGGACC SCO4483 4902880 - 4903482 + | hypothetical protein TERM 1517 4903697 - 4903715 + G 81 -17.4 -3.23216 | CGCGCCCTGGCTGGC CCCGGCCG CGG CGGCCGGG TTCGTGGTCCTGCAG SCO4484 4903479 - 4903841 + | integral membrane protein SCO4485 4904881 - 4903856 - | transcriptional regulator SCO4486 4904976 - 4905383 + | hypothetical protein SCO4487 4905443 - 4907221 + | serine/threonine protein kinase SCO4488 4907340 - 4909220 + | serine/threonine protein kinase SCO4489 4909526 - 4909224 - | hypothetical protein TERM 1518 4909304 - 4909353 + g 75 -12.5 -3.61398 | opp_overlap 4909275 CGGGCGCCACCCACT GCCGCCGACCGCCGCCGCCCTGC CAGG GCGAGGAGCCGGCGGGCTGCCGC TTCTTCCCGGCGACG SCO4490 4909614 - 4911071 + | decarboxylase SCD6910 ubiA 4911068 - 4911973 + | prenyltransferase TERM 1519 4912268 - 4912238 - g 83 -15.4 -3.65902 | CGGAGCCGACGGAAA GCCGGACACGTTCG ACG CGGACGTCTCCGGC GTACGGCACTGGAGC SCO4492 4912029 - 4912679 + | octaprenyl carboxylase SCO4493 4912701 - 4913204 + | transcription regulator AsnC SCO4494 4913249 - 4914412 + | hypothetical protein SCO4495 4914637 - 4915275 + | DNA polymerase related protein SCO4496 4915292 - 4915816 + | acetyltransferase SCO4497 4915937 - 4916236 + | hypothetical protein TERM 1520 4916250 - 4916297 + F 74 -9.8 -4.08216 | gap 1, opp_overlap 4916276, overlap 4916253 AACGTCCGTCACGCA CCCGCA-CGCCCCGGCTTCCG AATTCAC CGGAAACCGGGGCGCTCTGCG TTTTGCGGGCAGTAG SCO4498 4916551 - 4917873 + | proton transport protein SCO4499 4917934 - 4918656 + | TetR family transcriptional regulator SCO4500 4919880 - 4919005 - | dehydratase fabG 4921172 - 4919880 - | 3-ketoacyl-(acyl-carrier-protein) reductase SCO4502 4921335 - 4922621 + | acetyl-CoA acetyltransferase SCO4503 4923031 - 4924959 + | long-chain-fatty acid CoA ligase SCO4504 4925628 - 4924984 - | methyltransferase TERM 1521 4925736 - 4925696 - R 82 -13.2 -4.12188 | gap 1, opp_overlap 4925700, overlap 4925697 4925700 CGAGGATTCGCAAAA GGCAGGAGCCCCGTCGCCG AAAC CGGCG-CGGGGCTCCTTGG GTACTGCTGTCAATC TERM 1522 4925735 - 4925697 - R 79 -16.7 -3.06991 | gap 1, opp_overlap 4925700, overlap 4925696 4925700 GAGGATTCGCAAAAG GCAGGAGCCCCGTCGCCG AAAC CGGCG-CGGGGCTCCTTG GGTACTGCTGTCAAT TERM 1523 4925700 - 4925732 + r 93 -22.8 -3.11192 | gap 1, opp_overlap 4925697 4925696 4925700 GATTCGCAAAAGGCA GGAGCCCCGTCGCCG AAAC CGGCG-CGGGGCTCC TTGGGTACTGCTGTC TERM 1524 4925732 - 4925700 - R 90 -22.8 -2.75081 | gap 1, opp_overlap 4925700, overlap 4925697 4925696 GATTCGCAAAAGGCA GGAGCCCCGTCGCCG AAAC CGGCG-CGGGGCTCC TTGGGTACTGCTGTC SCO4505 4925953 - 4925750 - | cold shock protein SCO4506 4926246 - 4927094 + | hypothetical protein SCO4507 4927170 - 4928930 + | serine/threonine protein kinase SCO4508 4933568 - 4928991 - | cell division-related protein TERM 1525 4929738 - 4929700 - G 73 -18.1 -2.53263 | gap 1 TCGACGCGGAACGGA CGCCGGGCGCGCGGGACG CCGG CGTCGCGCGC-CGCGGCG GCCTCCCCGATCGCG TERM 1526 4932887 - 4932909 + g 70 -13.4 -3.40403 | TGGTCTGCCGTTCGG CCGGCCGC AGCCGGG GCGGCCGG TTGTAGTCCAGCCCC TERM 1527 4933941 - 4933928 - g 76 -4.5 -4.52781 | overlap 4933922 GAAGGAGAAGGAAAA GCTCC AGGA GAAGC TCGACGGCCTCCGCA SCO4509 4933782 - 4934156 + | hypothetical protein SCO4510 4934597 - 4934190 - | hypothetical protein SCO4511 4935107 - 4934688 - | integral membrane protein SCO4512 4935685 - 4935104 - | hypothetical protein SCO4513 4936350 - 4935682 - | hypothetical protein SCO4514 4936925 - 4936347 - | integral membrane protein SCO4515 4938164 - 4936959 - | hypothetical protein TERM 1528 4937110 - 4937125 + g 73 -6 -4.25104 | overlap 4937109 4937112 ATCTTCACCATGGCG CTGGCG AACC CGCCTG TTTTGATGGCGGCGG TERM 1529 4937773 - 4937785 + g 78 -6.9 -4.48072 | overlap 4937774 TCGTACTGCTTGAGG TCGCC GAT GGCGG TTTTGTGGTCCGTCT SCO4516 4938520 - 4938161 - | hypothetical protein SCO4517 4939515 - 4938790 - | hypothetical protein SCO4518 4940861 - 4939512 - | integral membrane protein SCO4519 4940966 - 4941562 + | integral membrane protein TERM 1530 4941539 - 4941569 + T 76 -9 -4.21319 | gap 1, opp_overlap 4941508 GCGGCGGGCGTGGAG TGGCCGC-CGCGC GTCGAG GCGTGAGCGGTCA TTTCTTGGGCTTCGT SCO4520 4941872 - 4941567 - | hypothetical protein SCO4521 4942980 - 4941895 - | secreted protein SCO4522 4943453 - 4942977 - | hypothetical protein SCO4523 4943703 - 4944296 + | integral membrane protein TERM 1531 4944349 - 4944320 - f 76 -8.5 -4.27316 | gap 1, opp_overlap 4944338, overlap 4944323 GGCCGGAAGGGAAAA GCACGCCCG-CGGT GAC ACCGGCCGCCGTGC CGTCGTCACGGGAGC SCO4524 4945126 - 4945845 + | hypothetical protein SCO4525 4945864 - 4946745 + | hypothetical protein SCO4526 4946742 - 4948049 + | protein kinase SCO4527 4948063 - 4949100 + | integral membrane protein SCO4528 4949109 - 4950017 + | integral membrane protein SCO4529 4950014 - 4950367 + | integral membrane protein SCO4530 4950395 - 4950955 + | hypothetical protein SCO4531 4950956 - 4951393 + | septum determining protein SCO4532 4951390 - 4951851 + | hypothetical protein SCO4533 4951930 - 4952256 + | hypothetical protein SCO4534 4952253 - 4953677 + | hypothetical protein SCO4535 4953674 - 4955002 + | integral membrane protein TERM 1532 4955170 - 4955142 - g 76 -15.9 -3.35679 | overlap 4955160 CCGCGGCATCGACAA CGCGCCGCACCTC AAG GAGGAGCTGCGCG GCGACCTGCGGCGCC SCO4536 4954999 - 4955643 + | hypothetical protein SCO4537 4955640 - 4956245 + | hypothetical protein SCO4538 4956636 - 4956301 - | hypothetical protein SCO4539 4957264 - 4956659 - | hypothetical protein SCO4540 4957544 - 4957302 - | hypothetical protein SCO4541 4959303 - 4957723 - | hypothetical protein SCO4542 4959573 - 4959382 - | hypothetical protein SCO4543 4960435 - 4959584 - | hypothetical protein SCO4544 4960649 - 4961074 + | hypothetical protein SCO4545 4961108 - 4962022 + | hypothetical protein SCO4546 4962128 - 4962778 + | lipoprotein SCO4547 4962778 - 4963845 + | secreted protein TERM 1533 4964162 - 4964129 - g 73 -11 -3.91897 | gap 2, opp_overlap 4964117 CTCGGCACCGAGAAA CCGCACGCCTCAGCCC GTGC GGG-TGCGGCG-GCGG ACGTTCGGGGACTTC SCO4548 4964061 - 4967069 + | integral membrane protein SCO4549 4967066 - 4967845 + | type IV peptidase SCO4550 4967924 - 4969123 + | hypothetical protein SCO4551 4969131 - 4969730 + | hypothetical protein SCO4552 4970770 - 4969766 - | hydrolase SCO4553 4970964 - 4971383 + | hypothetical protein SCO4554 4971401 - 4973632 + | bi-functional transferase/deacetylase SCO4555 4973632 - 4974723 + | integral membrane transferase ubiE 4974767 - 4975462 + | ubiquinone/menaquinone biosynthesis methyltransferase SCO4557 4975796 - 4975449 - | hypothetical protein SCO4558 4976418 - 4975855 - | acetyltransferase SCO4559 4976516 - 4977808 + | electron transfer oxidoreductase SCO4560 4978495 - 4977869 - | polypetide deformylase TERM 1534 4978604 - 4978567 - R 78 -17.7 -2.66634 | gap 1, overlap 4978564 CATGCCAGGAGAGGA CG-GAGGGCCGCAGCCCC CGA GCGGCTGCGGCCCTGTCG CGCGTGTACGAGTGG SCO4561 4979462 - 4978629 - | NLP/P60 family protein TERM 1535 4980509 - 4980541 + G 71 -6.9 -4.12188 | gap 1, overlap 4980510 AGATCGTCTTCCTCT ACCCCTGGGCCGTC ACCTTC GACG-CCCTGGGGA TTTTCGGGCTCGTGG SCO4562 4980274 - 4980633 + | NADH dehydrogenase subunit A TERM 1536 4980674 - 4980664 - g 86 -2.4 -5.08601 | opp_overlap 4980664 GGACTCGAAGAAAAA CTGC CGA GCGG CTTCCTGCTGACCAC SCO4563 4980646 - 4981200 + | NADH dehydrogenase subunit B SCO4564 4981197 - 4981952 + | NADH dehydrogenase subunit C SCO4565 4981949 - 4983271 + | NADH dehydrogenase subunit D SCO4566 4983268 - 4984140 + | NADH dehydrogenase subunit E SCO4567 4984137 - 4985486 + | NuoF, NADH dehydrogenase subunit TERM 1537 4985972 - 4985929 - g 72 -12.4 -3.65046 | gap 1 CTTCGAGGGCAAGAA GC-GGACCTACGAGAAGCCCG TGC CGATCTCCACGCAGGTCCTGC TCGACCGCGAGCGCT SCO4568 4985483 - 4988014 + | NADH dehydrogenase subunit G SCO4569 4988011 - 4989414 + | NADH dehydrogenase subunit H SCO4570 4989449 - 4990084 + | NADH dehydrogenase subunit I TERM 1538 4990227 - 4990257 + G 76 -15.4 -3.35679 | opp_overlap 4990206, overlap 4990229 4990230 GCACAGCGCGCTGTG CCTCGCCGGGACGA TGA TCGTCCTGGCGGTG TTCTACCTCGCCAAC TERM 1539 4990229 - 4990255 + G 77 -16.6 -3.24924 | opp_overlap 4990206, overlap 4990227 4990230 ACAGCGCGCTGTGCC TCGCCGGGACGA TGA TCGTCCTGGCGG TGTTCTACCTCGCCA TERM 1540 4990230 - 4990254 + G 73 -17.9 -2.5474 | opp_overlap 4990206, overlap 4990229 4990227 CAGCGCGCTGTGCCT CGCCGGGACGA TGA TCGTCCTGGCG GTGTTCTACCTCGCC TERM 1541 4990414 - 4990395 - g 73 -15 -3.26433 | opp_overlap 4990395 GAAGGAGACCATCAA GGGCCAGC GCTG GCTGGCCC TGCTGTCCGGGCTCG SCO4571 4990081 - 4990938 + | NADH dehydrogenase subunit J SCO4572 4990935 - 4991234 + | NADH dehydrogenase subunit K SCO4573 4991249 - 4993213 + | NADH dehydrogenase subunit L SCO4574 4993219 - 4994790 + | NADH dehydrogenase subunit M SCO4575 4994787 - 4996445 + | NADH dehydrogenase subunit N TERM 1542 4996505 - 4996552 + T 100 -36.6 -2.87344 | gap 1 GGCTTCACGGCTTCA CGGCTGTGGTCCGGCACC-CCTC TTC GAGGAGGTGCCGGACCACAGCCG TGTGTGCCCGGGCTA SCO4576 4997164 - 4996565 - | hypothetical protein TERM 1543 4997030 - 4997017 - G 71 -6.7 -4.13767 | overlap 4997019 CGCGTGAGTGGAAAA GAGTC TGCG GACTC ACGAAGACGAGGCTG TERM 1544 4997265 - 4997318 + H 73 -16 -2.90194 | gap 2 CGACGTGTCCTTGAC GCGGGCCGCGTCGGGCAGCCTGTGGA TAAC TCC-CGGGCTGTC-GGCGCGGACCCC TATCGTTGAGGCAGT TERM 1545 4999023 - 4998992 - g 72 -12.2 -3.66732 | gap 1 CAAGGAGCCCAAGAA GCCCGCCG-CGGCCA AGT CGGCGGGCGGCGGAC GCGGCGAGCGCAAGG SCO4577 4997397 - 4999427 + | helicase SCO4578 4999690 - 4999466 - | hypothetical protein SCO4579 5000690 - 4999752 - | integral membrane protein SCO4580 5002253 - 5000997 - | fumarylacetoacetase TERM 1546 5003490 - 5003530 + G 71 -15.3 -3.10622 | opp_overlap 5003496 CGACGAGGTCACCAC GACGAACGAGGACGACGGC GTG GCCGTCGTCCTCGAGCGGA TCTTCGGTACCTCTT TERM 1547 5003524 - 5003496 - g 100 -24.7 -3.23216 | opp_overlap 5003490 GGTCACCACGACGAA CGAGGACGACGGC GTG GCCGTCGTCCTCG AGCGGATCTTCGGTA SCO4581 5002738 - 5003547 + | hypothetical protein SCO4582 5004062 - 5003571 - | hypothetical protein SCO4583 5004917 - 5005927 + | polyprenyl diphosphate synthase TERM 1548 5006122 - 5006090 - f 80 -7.1 -4.69664 | gap 1 GACACCACGGAAAAA CACCAATCCTCACC GATTCG GGTGAGAAT-GGCG GCTCACGGGTGAACG SCO4584 5006187 - 5007449 + | hypothetical protein SCO4585 5007502 - 5008485 + | ABC transporter ATP-binding protein SCO4586 5008487 - 5009416 + | ABC transporter integral membrane protein SCO4587 5010046 - 5009444 - | hypothetical protein SCO4588 5010182 - 5011708 + | hypothetical protein SCO4589 5012719 - 5011745 - | aminopeptidase (secreted protein) SCO4590 5013400 - 5012930 - | hypothetical protein SCO4591 5013530 - 5014102 + | hypothetical protein SCO4592 5015214 - 5014126 - | integral membrane protein SCO4593 5016214 - 5015360 - | hypothetical protein TERM 1549 5016109 - 5016146 + g 70 -14.1 -3.29144 | gap 1 CGGCGGCCTTGTCGC GGTTCCGGACGACCGCGG TGA CC-TGGTCGGCCGGCACC TTGTCCAGCAGCTGC TERM 1550 5016353 - 5016321 - R 100 -26.4 -3.39142 | opp_overlap 5016343 CCTACAGGTAATCAA GAGGGGCCCGGACG GAAGT CGTCCGGGCCCCTC GTGCCGTGAGGCGGC SCO4594 5017434 - 5016376 - | 2-oxoglutarate ferredoxin oxidoreductase subunit beta SCO4595 5019364 - 5017427 - | oxidoreductase TERM 1551 5018527 - 5018507 - G 80 -3.2 -4.63928 | gap 1, overlap 5018509 5018510 ATAGGAGCCCAAAAA CAGCG-GCA GGTC CGCGCGCCG GGACGCGGCGATCAG TERM 1552 5019614 - 5019672 + r 95 -24.4 -2.71144 | CCGGACCGGACCGGA CTGACCCGGACCGGACCGGACTGGCCCG GAC TGGCCCGGCCTGGACCGGCCCGGGTCGG TGCTTCCGAGGCATG SCO4596 5020370 - 5019699 - | two-component system response regulator SCO4597 5022045 - 5020678 - | two-component system sensor kinase SCO4598 5023382 - 5022159 - | two-component system sensor kinase TERM 1553 5023080 - 5023047 - G 93 -20.3 -3.62522 | gap 1 CAACTGCGCGAAGAA GCCGCGCCCGCT-CCG CAA CGGCAGCGGGCTCGGC TCGTCCACCCGCACC TERM 1554 5023344 - 5023309 - G 79 -13.8 -3.59979 | CGGTCGTAGGCGAAA CGGGCCGGCGGCAGGC GGTC GCCGGCCGCTGAGCCG GTGCCGGCGAGGCCG SCO4599 5023578 - 5024018 + | NADH dehydrogenase subunit NuoA2 SCO4600 5024015 - 5024713 + | NADH dehydrogenase subunit NuoB2 SCO4601 5024710 - 5026071 + | dehydrogenase SCO4602 5026068 - 5027036 + | NADH dehydrogenase subunit NuoH2 SCO4603 5027036 - 5027629 + | NADH dehydrogenase subunit NuoI2 SCO4604 5027626 - 5028219 + | NADH dehydrogenase subunit NuoJ2 SCO4605 5028219 - 5028611 + | NADH dehydrogenase subunit NuoK2 SCO4606 5028608 - 5030602 + | NADH dehydrogenase subunit NuoL2 SCO4607 5030609 - 5032213 + | NADH dehydrogenase subunit NuoM2 SCO4608 5032210 - 5033757 + | NADH dehydrogenase subunit NuoN2 SCO4609 5033984 - 5034847 + | heat shock protein HtpX SCO4610 5034844 - 5035260 + | hypothetical protein SCO4611 5035358 - 5035951 + | hypothetical protein SCO4612 5037274 - 5036030 - | amino acid transporter SCO4613 5037414 - 5037680 + | integral membrane protein TERM 1555 5037704 - 5037730 + T 80 -10.1 -4.18018 | gap 1, opp_overlap 5037704 GGACCGGACGGGAAA GGGTGGGC-ACC GCCG GGACGCCCACCC TTTTCCGTCAACGAA TERM 1556 5037730 - 5037704 - T 79 -13.7 -3.60627 | opp_overlap 5037704 GGACCGGACGGGAAA GGGTGGGCACC GCCGG GACGCCCACCC TTTTCCGTCAACGAA SCO4614 5038276 - 5037788 - | nucleotide-binding protein TERM 1557 5038646 - 5038599 - R 89 -22.2 -2.62184 | opp_overlap 5038600 5038605, overlap 5038605 GGCGCCGCCACACGA CCGAAAGGGTCTGTGACCAGCA GCAA TGCTGATCGCAGACCCTTTCGT CGTTGACGGGTATGA TERM 1558 5038600 - 5038645 + r 95 -25.7 -2.72049 | opp_overlap 5038599 5038605, overlap 5038605 GCGCCGCCACACGAC CGAAAGGGTCTGTGACCAGCA GCAA TGCTGATCGCAGACCCTTTCG TCGTTGACGGGTATG TERM 1559 5038640 - 5038605 - R 91 -18.4 -3.70149 | opp_overlap 5038605 5038600, overlap 5038599 GCCACACGACCGAAA GGGTCTGTGACCAGCA GCAA TGCTGATCGCAGACCC TTTCGTCGTTGACGG TERM 1560 5038605 - 5038640 + r 93 -18.4 -3.84246 | opp_overlap 5038599 5038605, overlap 5038600 GCCACACGACCGAAA GGGTCTGTGACCAGCA GCAA TGCTGATCGCAGACCC TTTCGTCGTTGACGG SCO4615 5040125 - 5038758 - | integrase TERM 1561 5040168 - 5040145 - R 100 -21 -3.53012 | GGCCTTCCTGCGAAA GGGGCCCCGC CTCG GCGGGGCCCC GTCGGTGCGGTTGCG SCO4616 5040371 - 5040186 - | excisionase TERM 1562 5040555 - 5040586 + r 95 -16.7 -4.3739 | opp_overlap 5040550 ACGCAGATGACGCAG GCATGACGCAGGG ACCACC CTCTGCGTCATGC TTTTGTGCGCAGGTC TERM 1563 5040755 - 5040792 + r 100 -21.5 -3.36492 | opp_overlap 5040755 5040759, overlap 5040759 CGCCGCCGCCGAACA GCAAGAGGAGCACCC AGGGCGGC GGGTGCTCCTCTTGC TTGTGCGCTTGCGCC TERM 1564 5040792 - 5040755 - R 93 -22.2 -3.01712 | opp_overlap 5040755 5040759, overlap 5040759 CGCCGCCGCCGAACA GCAAGAGGAGCACCCA GGGCGG CGGGTGCTCCTCTTGC TTGTGCGCTTGCGCC TERM 1565 5040788 - 5040759 - R 79 -15.8 -3.36273 | opp_overlap 5040755 5040759, overlap 5040755 GCCGCCGAACAGCAA GAGGAGCACCCA GGGCGG CGGGTGCTCCTC TTGCTTGTGCGCTTG TERM 1566 5040759 - 5040788 + r 77 -15.1 -3.45832 | opp_overlap 5040759 5040755, overlap 5040755 GCCGCCGAACAGCAA GAGGAGCACCC AGGGCGGC GGGTGCTCCTC TTGCTTGTGCGCTTG SCO4617 5042281 - 5040809 - | ATP-binding protein SCO4618 5043134 - 5042283 - | hypothetical protein SCO4619 5043691 - 5043224 - | integral membrane protein TERM 1567 5043761 - 5043729 - R 73 -9.8 -3.95022 | gap 1, overlap 5043731 GCCAGGAAGACGAAA GACACCCCCG-GCTG GGTG CTGCGCGGGGGTGTG ACGGGTGGGTGTGAC TERM 1568 5043759 - 5043731 - R 72 -12.4 -3.56155 | gap 1, overlap 5043729 CAGGAAGACGAAAGA CACCCCCG-GCTG GGTG CTGCGCGGGGGTG TGACGGGTGGGTGTG SCO4620 5045910 - 5043865 - | sporulation-related protein SCO4621 5046464 - 5045925 - | sporulation-related protein TERM 1569 5046296 - 5046312 + g 77 -9.4 -4.15654 | CGTGCGAGCGGCCAC CACCGC GGGCG GCGGTG TTCTTGTTGTTGTTC TERM 1570 5046391 - 5046379 - G 71 -10.5 -3.72695 | opp_overlap 5046365 5046386, overlap 5046380 AGGGCGCCGACGAAA CCGCC CGC GGCGG CGCCGGCGTCGGCGA SCO4622 5046984 - 5046484 - | integral membrane protein SCO4623 5047012 - 5047170 + | hypothetical protein SCO4624 5047663 - 5047328 - | hypothetical protein SCO4625 5048670 - 5047663 - | hypothetical protein SCO4626 5049200 - 5048667 - | hypothetical protein SCO4627 5049466 - 5049197 - | hypothetical protein TERM 1571 5049534 - 5049505 - H 75 -15 -3.36569 | overlap 5049495 5049503 GGAACGGCCCAAACA GAGCCCCTGGTG TTCCCG CACCGGGGGCTC GCGCCGTTGAAGTCG TERM 1572 5049866 - 5049817 - H 80 -18.2 -2.90615 | gap 2, opp_overlap 5049821 5049825, overlap 5049820 5049821 AGTGGCCTGAAATGA GAATGCACCGCAGTCCTAGGACTG TCAA CAGTCCTAGGACTGT-GTGC-TTC ACTTGACCTGTCGAG TERM 1573 5049864 - 5049820 - H 90 -16.6 -3.60151 | gap 1, opp_overlap 5049821 5049825, overlap 5049817 5049821 GGCCTGAAATGAGAA TGCACCGCAGTCCTAGGACTG TCAA CAGTCCTAGGACTGT-GTGCT TCACTTGACCTGTCG TERM 1574 5049821 - 5049863 + H 93 -22.3 -3.1875 | gap 1, opp_overlap 5049820 5049817 5049821, overlap 5049825 GCCTGAAATGAGAAT GCACCGCAGTCCTAGGACTG TCAA CAGTCCTAGGACTGTG-TGC TTCACTTGACCTGTC TERM 1575 5049863 - 5049821 - H 86 -20.1 -2.75769 | gap 1, opp_overlap 5049821 5049825, overlap 5049820 5049817 GCCTGAAATGAGAAT GCACCGCAGTCCTAGGACTG TCAA CAGTCCTAGGACTGT-GTGC TTCACTTGACCTGTC TERM 1576 5049825 - 5049860 + H 90 -22.8 -2.78891 | opp_overlap 5049821 5049820 5049817, overlap 5049821 GAAATGAGAATGCAC CGCAGTCCTAGGACTG TCAA CAGTCCTAGGACTGTG TGCTTCACTTGACCT TERM 1577 5050418 - 5050438 + G 79 -13.9 -3.63068 | GACCCGACTCCGGGC CCCGCCGGC CGT GGCGGCGGG TTTCGCGTCCTGTAC SCO4628 5049893 - 5050702 + | regulator SCO4629 5050699 - 5051364 + | hypothetical protein SCO4630 5052724 - 5051465 - | hypothetical protein TERM 1578 5052910 - 5052854 - R 72 -16.4 -2.83409 | gap 1 CAGGAAGTGACCATA CGGGCCTGCCCCGGAGCGGGTGGACCA TGTG TGGGCCAGGCGCCCCGGGGC-GGCCAT CGTCGGTCGGTCTCG SCO4631 5054666 - 5052984 - | hypothetical protein TERM 1579 5055669 - 5055721 + H 100 -27.4 -3.35679 | gap 1, opp_overlap 5055672 5055678, overlap 5055673 5055678 CCTGGCGCCGCCACA CGACCGAAAGGGTCTGTGACCAGCA GCAA TGCTGATCACAGACCCTTTCG-TCG TTCTCGGTGCCCACG TERM 1580 5055719 - 5055672 - H 95 -26.6 -2.62184 | opp_overlap 5055669 5055673 5055678, overlap 5055678 GGCGCCGCCACACGA CCGAAAGGGTCTGTGACCAGCA GCAA TGCTGATCACAGACCCTTTCGT CGTTCTCGGTGCCCA TERM 1581 5055673 - 5055718 + H 100 -27.9 -2.8474 | opp_overlap 5055672 5055678, overlap 5055669 5055678 GCGCCGCCACACGAC CGAAAGGGTCTGTGACCAGCA GCAA TGCTGATCACAGACCCTTTCG TCGTTCTCGGTGCCC TERM 1582 5055678 - 5055713 + H 100 -20.6 -3.86944 | opp_overlap 5055672 5055678, overlap 5055673 5055669 GCCACACGACCGAAA GGGTCTGTGACCAGCA GCAA TGCTGATCACAGACCC TTTCGTCGTTCTCGG TERM 1583 5055713 - 5055678 - H 100 -22.8 -3.70149 | opp_overlap 5055678 5055673 5055669, overlap 5055672 GCCACACGACCGAAA GGGTCTGTGACCAGCA GCAA TGCTGATCACAGACCC TTTCGTCGTTCTCGG SCO4632 5055828 - 5058728 + | ATP/GTP binding protein SCO4633 5059681 - 5059025 - | hypothetical protein SCO4634 5061090 - 5059786 - | hydrolase TERM 1584 5061512 - 5061551 + H 87 -12.2 -4.26351 | overlap 5061514 GGTCACCGCTACTCT CAGTAGCCGATTGCGGGG TCGG TCCTTCAATCGGCTACTC TTTCTTGCGTTAATA TERM 1585 5061514 - 5061549 + H 82 -14.8 -3.72494 | overlap 5061512 TCACCGCTACTCTCA GTAGCCGATTGCGGGG TCGG TCCTTCAATCGGCTAC TCTTTCTTGCGTTAA rpmG 5061599 - 5061763 + | 50S ribosomal protein L33 TERM 1586 5061824 - 5061767 - f 77 -10.6 -4.07562 | gap 3, opp_overlap 5061773 5061777, overlap 5061769 5061782 GAAACGCGATAGAAA CAGG-C-TCGTACACGAGGCCGTCCCCGA GGT TTGGGGGCGGCCTCGTGT-CGTTGTCCCA GGCATGACGAGCAGC TERM 1587 5061821 - 5061769 - f 75 -13.4 -3.62348 | opp_overlap 5061773 5061777, overlap 5061767 5061782 AACGCGATAGAAACA GGC-TCGTACACGAGGCCGTCCCCGA GGT TTGGGGGCGGCCTCGTGT-CGTTGTC CCAGGCATGACGAGC TERM 1588 5061773 - 5061816 + F 100 -26.2 -3.29144 | gap 1, opp_overlap 5061769 5061767 5061782, overlap 5061777 CGATAGAAACAGGCT CGTACACGAGGCCGTCCCCGA GGT TTGGGGGCGGCCTCGTGT-CG TTGTCCCAGGCATGA TERM 1589 5061777 - 5061813 + F 95 -26.7 -2.82623 | opp_overlap 5061769 5061767 5061782, overlap 5061773 AGAAACAGGCTCGTA CACGAGGCCGTCCCCGA GGT TTGGGGGCGGCCTCGTG TCGTTGTCCCAGGCA SCO4636 5061859 - 5062311 + | hypothetical protein SCO4637 5062317 - 5062745 + | hypothetical protein SCO4638 5063669 - 5062845 - | hypothetical protein SCO4639 5063734 - 5064339 + | hypothetical protein SCO4640 5064405 - 5064998 + | TetR family transcriptional regulator SCO4641 5065114 - 5066586 + | transmembrane efflux protein SCO4642 5066624 - 5067004 + | hypothetical protein TERM 1590 5067010 - 5067049 + G 77 -15.6 -3.53012 | opp_overlap 5067010 CCTGACGTGAGGACA CGCCGCGACGTCCCGGCC GACC GGTCGGGGCGTTCCCGCG TTTCCCGCCACCCCG TERM 1591 5067777 - 5067813 + G 86 -16.5 -3.61398 | overlap 5067778 5067780 GAAGGGCATGGTGCT GGACCCGGAGGACCACG ACA CGTGGTCGGCCGGGTCG TTCTTCACCAACCCG TERM 1592 5067778 - 5067812 + G 82 -20 -2.76696 | overlap 5067777 5067780 AAGGGCATGGTGCTG GACCCGGAGGACCACG ACA CGTGGTCGGCCGGGTC GTTCTTCACCAACCC TERM 1593 5067780 - 5067810 + G 73 -16.8 -2.93073 | overlap 5067778 5067777 GGGCATGGTGCTGGA CCCGGAGGACCACG ACA CGTGGTCGGCCGGG TCGTTCTTCACCAAC murB 5067001 - 5068152 + | UDP-N-acetylenolpyruvoylglucosamine reductase SCO4644 5069623 - 5068592 - | adenosine deaminase TERM 1594 5069731 - 5069698 - R 100 -24.7 -4.55295 | GCTCGCACAAACAAA CAGGGCCACCCCTCA ACGT TGAGGGGTGGCCCCG CGGGACAACGGGACG SCO4645 5070975 - 5069749 - | aspartate aminotransferase secE 5071396 - 5071680 + | preprotein translocase subunit SecE TERM 1595 5071692 - 5071716 + F 75 -12.7 -3.66803 | opp_overlap 5071693, overlap 5071693 CTGAGTCGAGAGCGA AGGGCGCCGAG GTA CCCGGCGCCCC TTTCGCGTGTTCCAC TERM 1596 5071715 - 5071693 - f 81 -18.4 -3.12999 | opp_overlap 5071692 5071693 TGAGTCGAGAGCGAA GGGCGCCGAG GTA CCCGGCGCCC CTTTCGCGTGTTCCA TERM 1597 5071693 - 5071715 + F 72 -16.2 -2.7976 | opp_overlap 5071693, overlap 5071692 TGAGTCGAGAGCGAA GGGCGCCGAG GTA CCCGGCGCCC CTTTCGCGTGTTCCA SCO4647 5071761 - 5072663 + | transcription antitermination protein TERM 1598 5072704 - 5072748 + F 100 -23 -4.56775 | gap 1, overlap 5072742 CTGGACGTACTACTT CCGACCAGGTCAGGCGCCCGC TCGC GCGG-CGTCTGACCTGCTCGG TTTTTGGCCGCGCAT TERM 1599 5073008 - 5072988 - g 72 -14.7 -3.33261 | CTGCAAGGCCTACAA CGCCGCGAC CGA GTCGCAGCG CGGCTGGGTCATCCC rplK 5072851 - 5073285 + | 50S ribosomal protein L11 rplA 5073369 - 5074094 + | 50S ribosomal protein L1 TERM 1600 5074115 - 5074156 + F 95 -20.1 -3.58536 | CAGCTCGCCCCACCG GTTCACGGGCCCCGCACCT TCCG AGGTGCGGGGCCCGTCCCC TTTGGCCGTCCCTTT SCO4650 5074267 - 5075124 + | lipoprotein SCO4651 5075273 - 5076121 + | lipoprotein TERM 1601 5076348 - 5076372 + F 95 -15 -4.19735 | gap 1 CGATCGGTCGAGCCA CGCCCCGTGCG CCTG CGC-CGGGGCG TTTCGTTTTCCCCAG rplJ 5076440 - 5076970 + | 50S ribosomal protein L10 TERM 1602 5076957 - 5076980 + F 75 -11 -3.96148 | gap 1, opp_overlap 5076946 5076971, overlap 5076962 AGCAGGACGAGCAGG GCGGTGCCGAG TAA CTCGGC-TCGC TTTCTGGTCCGGGCC rplL 5077088 - 5077471 + | 50S ribosomal protein L7/L12 TERM 1603 5078997 - 5078981 - g 71 -7.9 -3.97139 | CAAGGTGAACAAGAA GCTCGGC GCG GACGAGC CGCTGGACGCCGGCG rpoB 5078061 - 5081546 + | DNA-directed RNA polymerase subunit beta TERM 1604 5081596 - 5081540 - f 93 -21.2 -3.03441 | gap 4, opp_overlap 5081541 5081590 GAGCAGCGTCGAAGA GGTCTGACGGGAGTCAGGCGGGGCCTGT CCTCC ACAGGCCCCGCC-GA-TCCCG-C-GACC CCCGTTTCAGACCAC TERM 1605 5082349 - 5082327 - g 72 -12 -3.62522 | GAACCGGTTCAAGAA CCTCAAGGTC CAG GACCTGGAGG GCGACGAGCTGCTCT TERM 1606 5083372 - 5083398 + G 71 -10.8 -3.71848 | overlap 5083374 CGTCCGGTGACGATG CCGACCCAGGAC ATG GTCCTCGGTCTG TTCTTCCTCACCACC SCO4655 5081644 - 5085543 + | DNA-directed RNA polymerase subunit beta' TERM 1607 5085600 - 5085562 - f 95 -26.1 -2.62983 | opp_overlap 5085578 5085579, overlap 5085567 GGCAGCTTGATACGA CCGAAGGGCGGTCACCC CGAGC GGGTGGCCGCCCTTCGG CGTGCCGCCCCCCGC TERM 1608 5085595 - 5085567 - f 79 -17.4 -3.11634 | opp_overlap 5085578 5085579, overlap 5085562 CTTGATACGACCGAA GGGCGGTCACCC CGAGC GGGTGGCCGCCC TTCGGCGTGCCGCCC SCO4656 5085653 - 5086240 + | integral membrane protein SCO4657 5087561 - 5086257 - | integral membrane protein SCO4658 5087653 - 5088690 + | glucosyltransferase TERM 1609 5088693 - 5088717 + F 74 -2.7 -4.64861 | overlap 5088694 CAAAGTGGGATAGAG CGGGCGGCG ATGCCGG TGTCGCCCA TTTGTTTTGACCGCA rpsL 5088946 - 5089317 + | 30S ribosomal protein S12 SCO4660 5089320 - 5089790 + | 30S ribosomal protein S7 SCO4661 5089830 - 5091956 + | elongation factor G tuf 5092130 - 5093323 + | elongation factor Tu SCO4663 5093666 - 5093313 - | hypothetical protein TERM 1610 5093375 - 5093404 + g 93 -20.1 -3.59262 | opp_overlap 5093375 GGCTGATGCCTGAAA GGGCCCGTACGAC TTCG GTCGTACGGGTCC TTTCGCCATGTGCGG TERM 1611 5093404 - 5093375 - G 85 -17.9 -3.55444 | opp_overlap 5093375 GGCTGATGCCTGAAA GGGCCCGTACGAC TTCG GTCGTACGGGTCC TTTCGCCATGTGCGG SCO4664 5095631 - 5093796 - | integral membrane protein SCO4665 5096276 - 5095647 - | hypothetical protein SCO4666 5097010 - 5096270 - | ABC-transporter ATP-binding protein SCO4667 5097181 - 5098476 + | two-component system sensor kinase SCO4668 5098476 - 5099108 + | two-component system response regulator SCO4669 5099276 - 5100415 + | hypothetical protein SCO4670 5101891 - 5100500 - | serine protease precursor SCO4671 5102990 - 5102043 - | LysR family regulatory protein SCO4672 5104845 - 5103076 - | secreted protein SCO4673 5105869 - 5104850 - | DeoR family transcriptional regulator SCO4674 5105881 - 5106318 + | hypothetical protein SCO4675 5107239 - 5106331 - | hypothetical protein SCO4676 5108129 - 5107257 - | hypothetical protein SCO4677 5108811 - 5108377 - | regulatory protein SCO4678 5108924 - 5109772 + | hypothetical protein SCO4679 5109769 - 5109960 + | hypothetical protein SCO4680 5110801 - 5109911 - | DNA-binding protein SCO4681 5110846 - 5111655 + | short chain dehydrogenase SCO4682 5111657 - 5111866 + | tautomerase SCO4683 5112014 - 5113399 + | glutamate dehydrogenase SCO4684 5113748 - 5113951 + | cold shock protein TERM 1612 5113974 - 5114028 + F 80 -17.1 -3.16055 | gap 1, overlap 5113983 GCGTCATCCGGCGCA C-ACTTTGCAGCTGGGGCCCGCATCC TTCG GGGTGCGGGCCCCAGCTGCATTCCCG TTCATCCGGCATTTC TERM 1613 5113983 - 5114018 + F 100 -28.4 -2.55253 | overlap 5113974 GGCGCACACTTTGCA GCTGGGGCCCGCATCC TTCG GGGTGCGGGCCCCAGC TGCATTCCCGTTCAT SCO4685 5114147 - 5115568 + | DEAD-box RNA helicase SCO4686 5115614 - 5115925 + | hypothetical protein SCO4687 5116320 - 5115961 - | hypothetical protein SCO4688 5116728 - 5116372 - | hypothetical protein TERM 1614 5116749 - 5116794 + H 79 -13.4 -3.86524 | gap 2, opp_overlap 5116784, overlap 5116752 CCTCTGTTCGGGGAA TGCGTCAAGGGGCCTTGGTGCC GAAC GGCACCAAGGCCCC--GAGGGA TTTGTAACACCATCT TERM 1615 5116752 - 5116793 + H 73 -16.5 -2.91593 | opp_overlap 5116784, overlap 5116749 CTGTTCGGGGAATGC GTCAAGGGGCCTTGGTGCC GAAC GGCACCAAGGCCCCGAGGG ATTTGTAACACCATC SCO4689 5117228 - 5117560 + | hypothetical protein SCO4690 5117634 - 5117876 + | hypothetical protein SCO4691 5117928 - 5118521 + | hypothetical protein SCO4692 5118613 - 5119260 + | hypothetical protein SCO4693 5119357 - 5119617 + | hypothetical protein TERM 1616 5119597 - 5119609 + F 70 -4.7 -4.36914 | overlap 5119598 CCTGGACCGCTCTCC TCGGC TCC GCCGC TTTTCTGACCGGCGG SCO4694 5119650 - 5119892 + | hypothetical protein SCO4695 5119938 - 5120483 + | hypothetical protein SCO4696 5120514 - 5120981 + | hypothetical protein SCO4697 5121109 - 5122923 + | integral membrane protein SCO4698 5122836 - 5123855 + | IS1652 transposase SCO4699 5123855 - 5126638 + | Rhs protein SCO4700 5126659 - 5127108 + | hypothetical protein TERM 1617 5127182 - 5127204 + F 73 -10.5 -3.84825 | overlap 5127183 5127198 ATGCCGGCGCTTCCG GCCGAGGCG CGGCA CGCCTCGGG TTTGATCTCCGTCAC rpsJ 5127609 - 5127917 + | 30S ribosomal protein S10 rplC 5127934 - 5128578 + | 50S ribosomal protein L3 rplD 5128587 - 5129246 + | 50S ribosomal protein L4 SCO4704 5129246 - 5129665 + | 50S ribosomal protein L23 rplB 5129706 - 5130542 + | 50S ribosomal protein L2 rpsS 5130555 - 5130836 + | 30S ribosomal protein S19 rplV 5130849 - 5131226 + | 50S ribosomal protein L22 TERM 1618 5131913 - 5131873 - g 77 -16 -3.28712 | gap 1, overlap 5131874 GGTCCGCGCCGAGAA CGCCGCCGCGCGTGCGGGC AACC GCCCGGCC-CGCGGTGGCG GCAACGACCGCCCGG rpsC 5131226 - 5132059 + | 30S ribosomal protein S3 rplP 5132065 - 5132484 + | 50S ribosomal protein L16 SCO4710 5132484 - 5132708 + | 50S ribosomal protein L29 rpsQ 5132708 - 5132995 + | 30S ribosomal protein S17 TERM 1619 5133027 - 5133000 - f 82 -9.8 -4.32951 | overlap 5132996 5133002 AGGCCAAGTAAGAAA TCTCCTGCGGGG CATT CCTCGCAGGACA GTTCCGCCAGGCTCC TERM 1620 5133379 - 5133348 - g 70 -13 -3.40403 | overlap 5133349 5133369 5133372 CCGCTTCGACGAGAA CGCCGCCGTCATTC TGAA GAACGACGGCGACC CTCGCGGCACCCGTA TERM 1621 5133378 - 5133349 - g 70 -16.5 -2.64099 | overlap 5133348 5133369 5133372 CGCTTCGACGAGAAC GCCGCCGTCATTC TGAA GAACGACGGCGAC CCTCGCGGCACCCGT rplN 5133103 - 5133471 + | 50S ribosomal protein L14 rplX 5133474 - 5133797 + | 50S ribosomal protein L24 rplE 5133797 - 5134354 + | 50S ribosomal protein L5 rpsN 5134360 - 5134545 + | 30S ribosomal protein S14 TERM 1622 5134597 - 5134635 + F 77 -16.6 -2.87344 | AACTGGGTCGGCAGG GGCCCGGCTCCGCATGCC TTA GGCTTGCGGGGTTGGGCG TCTGTCGCGCCCGTA rpsH 5134757 - 5135155 + | 30S ribosomal protein S8 rplF 5135180 - 5135719 + | 50S ribosomal protein L6 rplR 5135723 - 5136106 + | 50S ribosomal protein L18 rpsE 5136150 - 5136755 + | 30S ribosomal protein S5 rpmD 5136758 - 5136940 + | 50S ribosomal protein L30 rplO 5136943 - 5137398 + | 50S ribosomal protein L15 TERM 1623 5137431 - 5137470 + F 93 -23.7 -2.70932 | opp_overlap 5137425 5137422 5137454, overlap 5137435 ATGACATGAGCGATC CCGACCGGGGATGCCCC ACAAAA GGGGTATCCCCGGTTGG TCGTTCCAAGGGGAG TERM 1624 5137435 - 5137466 + F 86 -19.5 -3.27298 | opp_overlap 5137425 5137422 5137454, overlap 5137431 CATGAGCGATCCCGA CCGGGGATGCCCC ACAAAA GGGGTATCCCCGG TTGGTCGTTCCAAGG TERM 1625 5137464 - 5137454 - f 78 -8.2 -4.37886 | opp_overlap 5137435 5137431, overlap 5137425 5137422 GGATGCCCCACAAAA GGGG TAT CCCC GGTTGGTCGTTCCAA secY 5137655 - 5138968 + | preprotein translocase subunit SecY SCO4723 5138968 - 5139621 + | adenylate kinase TERM 1626 5139637 - 5139670 + F 82 -19.6 -2.63596 | overlap 5139639 TACTCCGCCCGGCTT CAGCCGCGGTCCCT CGCTCA GGGGGCCGCGGCTG TGCTGTGGGGTGGGA TERM 1627 5139639 - 5139668 + F 73 -16.4 -2.85999 | overlap 5139637 CTCCGCCCGGCTTCA GCCGCGGTCCCT CGCTCA GGGGGCCGCGGC TGTGCTGTGGGGTGG SCO4724 5139773 - 5140609 + | methionine aminopeptidase SCO4725 5140751 - 5140972 + | translational initiation factor IF1 rpmJ 5141041 - 5141154 + | 50S ribosomal protein L36 rpsM 5141343 - 5141723 + | 30S ribosomal protein S13 SCO4728 5141791 - 5142195 + | 30S ribosomal protein S11 SCO4729 5142327 - 5143349 + | DNA-directed RNA polymerase subunit alpha rplQ 5143544 - 5144050 + | 50S ribosomal protein L17 TERM 1628 5144132 - 5144163 + F 100 -20.2 -4.58773 | overlap 5144105 CCCCTTCCGGGCGTT GCGGGTCCGTTCCT TTCG AGGAGCGGGCCCGC TTTTCCTTTGCTGAG truA 5144190 - 5145044 + | tRNA pseudouridine synthase A SCO4732 5145963 - 5145064 - | hypothetical protein TERM 1629 5147200 - 5147237 + G 73 -9.7 -4.07568 | gap 1, overlap 5147201 5147219 ACCGGGTCCCGCAGG GGCGGTCGCCGGAGC-CG GAG CGTGCTCCCGCGGCCCCG TTTTGACCCGGCCGC SCO4733 5146008 - 5147243 + | integral membrane protein rplM 5147451 - 5147894 + | 50S ribosomal protein L13 rpsI 5147937 - 5148449 + | 30S ribosomal protein S9 TERM 1630 5148478 - 5148519 + F 100 -24.5 -3.92641 | GTACAGGCTGTACTC CGAACGCCCCGGCGGCACG CCAC TGTGCTGCCGGGGCATTCG TTTATCCCTGCCGTT SCO4736 5148674 - 5150032 + | phospho-sugar mutase SCO4737 5151107 - 5150160 - | integral membrane protein SCO4738 5152157 - 5151168 - | pantothenate kinase SCO4739 5152417 - 5153223 + | lipoprotein TERM 1631 5153294 - 5153310 + F 73 -15.1 -3.23216 | opp_overlap 5153283, overlap 5153293 AGGATGCCCGCTCTG CGGCCGC CGC GCGGCCG TTCCTGCTCGTAGGC SCO4740 5153334 - 5155181 + | D-fructose-6-phosphate amidotransferase SCO4741 5155785 - 5155213 - | hypothetical protein SCO4742 5157288 - 5155831 - | hypothetical protein SCO4743 5157368 - 5157973 + | hypothetical protein acpS 5158372 - 5158001 - | 4'-phosphopantetheinyl transferase TERM 1632 5158574 - 5158626 + G 100 -25.6 -2.79302 | gap 2, opp_overlap 5158595 GCCGAGATCGACCTG GCCGCCCTGCGGGCCAACGTACGCGC ACT GCGCGAACG--GGCCCCCGGGGCGGC TCTCATGGCCGTCGT SCO4745 5158508 - 5159683 + | alanine racemase SCO4746 5159838 - 5161100 + | lipase SCO4747 5161171 - 5161617 + | ATP/GTP binding protein SCO4748 5161764 - 5162000 + | hypothetical protein SCO4749 5162590 - 5162036 - | secreted protein SCO4750 5162784 - 5163437 + | hypothetical protein SCO4751 5163434 - 5163967 + | acetyltransferase SCO4752 5163960 - 5165084 + | O-sialoglycoprotein endopeptidase SCO4753 5165081 - 5165353 + | hypothetical protein TERM 1633 5165493 - 5165476 - g 77 -9.1 -4.18762 | opp_overlap 5165481, overlap 5165464 AACCCGGACGCAAAA GCGGTCC GCCC AGACCGC GACCCTCGCCGAGAT SCO4754 5165438 - 5166505 + | transcriptional regulator SCO4755 5166604 - 5167686 + | transcriptional regulator SCO4756 5167797 - 5168153 + | hypothetical protein SCO4757 5168216 - 5169475 + | hypothetical protein SCO4758 5170752 - 5169472 - | hypothetical protein SCO4759 5170780 - 5171655 + | secreted protein SCO4760 5171652 - 5172401 + | secreted protein groES 5172737 - 5173045 + | co-chaperonin GroES groEL 5173179 - 5174804 + | chaperonin GroEL TERM 1634 5174829 - 5174868 + T 100 -31.6 -3.57263 | opp_overlap 5174832, overlap 5174832 TGAGCTGAGCTGAGC GAACGGTGCCCGGTCCCC TGCG GGGGGCCGGGCACCGTTC TTTCCAGGTGCCGGT TERM 1635 5174832 - 5174865 + T 100 -27.5 -3.92542 | opp_overlap 5174832, overlap 5174829 GCTGAGCTGAGCGAA CGGTGCCCGGTCCCC TGCG GGGGGCCGGGCACCG TTCTTTCCAGGTGCC TERM 1636 5174865 - 5174832 - T 100 -25.3 -3.06796 | opp_overlap 5174829 5174832 GCTGAGCTGAGCGAA CGGTGCCCGGTCCCC TGCG GGGGGCCGGGCACCG TTCTTTCCAGGTGCC SCO4763 5176285 - 5175044 - | hypothetical protein SCO4764 5177201 - 5176428 - | dehydrogenase SCO4765 5177957 - 5177256 - | hypothetical protein SCO4766 5178021 - 5178941 + | transcriptional regulator SCO4767 5179345 - 5179007 - | regulatory protein SCO4768 5179727 - 5180338 + | two-component regulator SCO4769 5180620 - 5181207 + | RNA polymerase sigma factor SigD TERM 1637 5181262 - 5181248 - f 70 -4.2 -4.36914 | opp_overlap 5181252, overlap 5181252 CCCTCTCGTACAAAA GCACGA AGG TCGCAC GCTTCCTTGATCGTG SCO4770 5181347 - 5182852 + | inosine 5' monophosphate dehydrogenase SCO4771 5182993 - 5184117 + | inositol-5-monophosphate dehydrogenase TERM 1638 5184135 - 5184166 + F 100 -23.8 -3.62096 | GCCACGGCATGTGAA GGGGCCGGTCACCT GGTG GGGTGACCGGCCCC TTTCGCGTGCTCGGG TERM 1639 5185661 - 5185637 - g 87 -20.1 -3.06261 | GCCGAAGGCGGAAGA CCTCCTGGAGC GCC GCTCCAGGAGG CAGCCTGAGCCAGGA SCO4772 5184449 - 5185669 + | transposase SCO4773 5186988 - 5185771 - | nucleotide-sugar dehydrogenase SCO4774 5187291 - 5188997 + | glycerol phosphate dehydrogenase TERM 1640 5189184 - 5189141 - g 81 -18.1 -3.24924 | overlap 5189139 CCCGTACGGACAAGA GCGCACGTCTCCTCGCCGG GCGGTA CCGGCTGGGAGACGTGCTC GGCCGCGGCGGCATG TERM 1641 5189708 - 5189740 + G 70 -16.9 -2.62184 | opp_overlap 5189703 5189704, overlap 5189712 GCGGCCACAAGCCCG GCCCGGCCGCCGACC TCT GGTCGCTGGGCGGGC TGCTGTACGCCGCCG SCO4775 5189098 - 5191251 + | serine/threonine protein kinase TERM 1642 5191261 - 5191288 + F 77 -15.5 -3.53091 | TCCTGAGCGCAGGGA CCCGGGCCCCG GGGCGA CGGGACCCGGG TTTGAGCCGCCCGAT TERM 1643 5192096 - 5192130 + G 71 -15.6 -3.08679 | CGAGCGCGACGCAGT CTCCGGTGCGGGCGGC GGC GTTCCCCGCGCCGGGG TCTTCGGTCCGGGGG TERM 1644 5192415 - 5192360 - g 90 -19.6 -3.31792 | gap 1 CCAGGAGGCCCAGAA CGGCC-GCGCGGCCCTGCCGGGCGC CCGGCCC GCCCCCGACGGCGCCACGCAGGCCG GTGGCCCCGGCACGA SCO4776 5191425 - 5194364 + | serine/threonine protein kinase SCO4777 5194501 - 5196300 + | protein serine/threonine kinase TERM 1645 5197328 - 5197363 + G 89 -21.8 -3.01712 | CGGTGCTGCTGGTCG TCGCGGCGGCGGGCGC GGGC GTGTCCGCCGCCGCGC TGTTCGCCGACGGAG SCO4778 5196394 - 5197536 + | serine/threonine protein kinase TERM 1646 5198637 - 5198603 - g 81 -17.9 -3.28712 | gap 1 GGGCCTGCTGGACAA GGACCCGGCGCGCCGT CCGG ACGCCGC-CCGGGTCC GCGCCCTGCTGGCCG SCO4779 5197710 - 5199356 + | serine/threonine protein kinase gabD2 5199496 - 5201109 + | succinic semialdehyde dehydrogenase SCO4781 5201210 - 5203018 + | cholesterol oxidase TERM 1647 5203101 - 5203056 - T 100 -21.2 -3.40403 | CCCCGGGCACGAGAA GGCGAAGAGGACCCGCACCC CCCTCC GAGCGCGGGTCCCCCTCACC CAGCCTGTGTCACGC SCO4782 5203796 - 5203137 - | integral membrane protein SCO4783 5203840 - 5204163 + | hypothetical protein TERM 1648 5204237 - 5204268 + T 100 -24.4 -3.4252 | overlap 5204264 CACTACCCGTTCCGT CGGCCGGCCCCGGG CGTC CCCGGAGCCGGCCG TTCTCATGGGTGACC TERM 1649 5204278 - 5204311 + T 73 -14.5 -3.14211 | overlap 5204264 CGGCCGTTCTCATGG GTGACCGGGCTGCTG TCCC CTGCCGTCCGGTCAC TTCCTGGAGCGAGGT SCO4784 5204842 - 5204510 - | hypothetical protein TERM 1650 5204892 - 5204853 - H 100 -25.1 -3.53811 | gap 1, opp_overlap 5204847 5204848 5204888, overlap 5204854 GGCACGGTCCGCAAA CGCCAGGCGCCCCGGACC TTGTC GGCCCGGGGCGCCTGG-G AAGTCGCTTGTCAGT TERM 1651 5204892 - 5204854 - H 95 -25.3 -2.72144 | opp_overlap 5204847 5204848 5204888, overlap 5204853 GCACGGTCCGCAAAC GCCAGGCGCCCCGGACC TTGTC GGCCCGGGGCGCCTGGG AAGTCGCTTGTCAGT guaA 5205166 - 5206746 + | bifunctional GMP synthase/glutamine amidotransferase protein SCO4786 5207217 - 5206750 - | hypthetical protein SCD6318c SCO4787 5207363 - 5208166 + | hypothetical protein SCO4788 5208328 - 5209623 + | ntegral membrane protein SCO4789 5209775 - 5210290 + | integral membrane protein SCO4790 5211922 - 5210501 - | integral membrane protein SCO4791 5212113 - 5213405 + | two-component system sensor kinase SCO4792 5213402 - 5214157 + | two-component system DNA-binding response regulator SCO4793 5215302 - 5214259 - | NPL/P60 family secreted protein SCO4794 5215428 - 5215964 + | integral membrane protein SCO4795 5216958 - 5215942 - | integral membrane protein SCO4796 5218181 - 5216985 - | NLP/P60 family secreted protein TERM 1652 5217984 - 5218020 + g 71 -10.8 -3.79906 | gap 1 CGCGTTGTACTTCTC GGTCGCCGACCCG-GCC TGGC GGTACAGGTCGTCGACC TTCTTCTCGACCTCC SCO4797 5218624 - 5221119 + | ATP-dependent DNA helicase II SCO4798 5222906 - 5221209 - | peptidase TERM 1653 5222788 - 5222764 - G 71 -12.7 -3.53012 | overlap 5222765 CCGCCGGTGGCGAAA CCGGCGGAGGC GTG GCCACCGCCGT ACGTGGTGAGGTTGC TERM 1654 5222787 - 5222765 - G 70 -16.2 -2.71712 | overlap 5222764 CGCCGGTGGCGAAAC CGGCGGAGGC GTG GCCACCGCCG TACGTGGTGAGGTTG SCO4799 5224098 - 5223103 - | secreted lipase SCO4800 5224492 - 5224908 + | isobutiryl CoA mutase, small subunit TERM 1655 5224962 - 5224908 - T 79 -18.4 -2.78384 | gap 1 GCCCGCGGGAGCATA GGCCTCC-CCCCTCGGACCGCCGCC TGTGCG GGCGGCGGGTCACGGGGTGGTGGCC CGGAGGACGGTGGCT SCO4801 5226826 - 5225006 - | hypothetical protein TERM 1656 5226796 - 5226749 - G 70 -14.1 -3.28712 | gap 3, overlap 5226750 GTCCGGCGGGGAGAA CCCGGGCTCGGCTGCCGGCC-CCG ACA CGGTGGCCGGC-GCCG-GTGCGGA CGGGTCCGTGGGGGC SCO4802 5228001 - 5226862 - | hypothetical protein TERM 1657 5227210 - 5227230 + g 70 -13.9 -3.28712 | CTCGGGCGGTGCGAA CCGGCGGCC GAG GGCCGCCCG TTGTCGCCCCGGACC SCO4803 5228085 - 5229206 + | hypothetical protein SCO4804 5229309 - 5231756 + | hypothetical protein SCO4805 5231927 - 5233081 + | hypothetical protein SCO4806 5233252 - 5234196 + | secreted protein TERM 1658 5234653 - 5234595 - g 71 -12.5 -3.53012 | gap 3, overlap 5234596 TCCGTCCGGCCGAAA CCCCGCGGTCCGGTCCGGCGGGTCCCCA TTGGGG TGGGGACCAGCCGGACCGCACCCC---G GCGGACCGCATCCGT TERM 1659 5234654 - 5234596 - g 100 -26.8 -2.71712 | gap 1, overlap 5234595 CCGTCCGGCCGAAAC CCCGCGGTCCGGTCCGGCGGGTCCCCA TTGGGG TGGGGACCAGCCGGACCGCACCCCGG- CGGACCGCATCCGTG SCO4807 5234328 - 5234783 + | hypothetical protein sucC 5234993 - 5236177 + | succinyl-CoA synthetase subunit beta TERM 1660 5236922 - 5236892 - g 75 -12.5 -3.64487 | GTACATCTCGAAGAA CGTGACGAAGCCG GTCGT CGGCTACGTCGCG GGCTTCACCGCGCCC SCO4809 5236206 - 5237090 + | succinyl-CoA synthetase subunit alpha SCO4810 5238231 - 5237203 - | hypothetical protein SCO4811 5238424 - 5240100 + | integral membrane protein SCO4812 5241036 - 5240239 - | integral membrane protein purN 5241331 - 5241978 + | phosphoribosylglycinamide formyltransferase purH 5241975 - 5243546 + | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase SCO4815 5244607 - 5243963 - | secreted protein SCO4816 5247029 - 5244609 - | hypothetical protein SCO4817 5248573 - 5247215 - | serine/threonine protein kinase SCO4818 5249310 - 5248570 - | hypothetical protein TERM 1661 5249497 - 5249455 - R 100 -30.7 -3.09516 | gap 1, overlap 5249485 GTGCGGACGACGGAA CGGCGGCCCCCGGC-CCCTC CGCG GAGGGAACCGGGGGCCGCCG CGGTGGCGGACCCGG SCO4819 5249992 - 5249522 - | secreted protein SCO4820 5252229 - 5250091 - | serine/threonine protein kinase SCO4821 5252957 - 5252226 - | hypothetical protein SCO4822 5253685 - 5253098 - | integral membrane protein SCO4823 5253808 - 5253984 + | hypothetical protein SCO4824 5253981 - 5254835 + | bifunctional protein (methylenetetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclohydrolase) SCO4825 5254825 - 5255361 + | integral membrane protein TERM 1662 5255710 - 5255673 - g 71 -9 -3.91897 | gap 1 GTGGGTAGCCAGAAA CGGGT-GCCGCGCGGGG GGACG CCGCGCGCGGGGACCAG CGGGGAAACGACCAG SCO4826 5255658 - 5257154 + | hypothetical protein TERM 1663 5257292 - 5257333 + F 74 -8.1 -4.21812 | gap 2 ACGGTACCCCCGAAC GGCGGTCGCCTTCGTCC TCCCTCTCCC GGAC-A-GGCGGCCGCC TTCTTTTGCGTGCCC SCO4827 5257517 - 5258506 + | malate dehydrogenase TERM 1664 5258521 - 5258567 + F 100 -24.5 -3.64822 | gap 1, overlap 5258524 AGTCCGCCCCGACGC CCG-CACGGGCCCCGTTCCGGT TCAG GCCGGGACGGGGCCCGTGTCCG TTTCCGTGCACCCAT TERM 1665 5258524 - 5258563 + F 100 -29.4 -2.66272 | overlap 5258521 CCGCCCCGACGCCCG CACGGGCCCCGTTCCGGT TCAG GCCGGGACGGGGCCCGTG TCCGTTTCCGTGCAC SCO4828 5258735 - 5260264 + | betaine aldehyde dehydrogenase SCO4829 5260321 - 5261853 + | oxidoreductase SCO4830 5261850 - 5263034 + | glycine betaine ABC transport system ATP-binding protein SCO4831 5263034 - 5264980 + | glycine betaine ABC transport system integral membrane protein SCO4832 5264982 - 5265950 + | glycine betaine-binding lipoprotein SCO4833 5266685 - 5265954 - | phosphorylmutase SCO4834 5267128 - 5266682 - | hypothetical protein SCO4835 5267634 - 5267125 - | hypothetical protein SCO4836 5267682 - 5269070 + | GntR family regulator TERM 1666 5269720 - 5269681 - g 73 -15 -3.28712 | gap 1, overlap 5269683 5269684 GCCCTTCCTGGAGAA GACCGGCGCCCGCCAGGTC AAC GACCTGACCGACGCCGA-C TGGGCCGAGCTGCGC TERM 1667 5269719 - 5269683 - g 84 -18.7 -3.21276 | overlap 5269681 5269684 CCTTCCTGGAGAAGA CCGGCGCCCGCCAGGTC AAC GACCTGACCGACGCCGA CTGGGCCGAGCTGCG TERM 1668 5269718 - 5269684 - g 80 -20 -2.52623 | overlap 5269683 5269681 CTTCCTGGAGAAGAC CGGCGCCCGCCAGGTC AAC GACCTGACCGACGCCG ACTGGGCCGAGCTGC TERM 1669 5270134 - 5270110 - g 70 -12.7 -3.38272 | opp_overlap 5270106 GACCACCACCCACAA GTCGCTGCGCG GCC CGCGCGGCGGC ATGGTCCTGTGCGAC glyA 5269286 - 5270731 + | serine hydroxymethyltransferase SCO4838 5271402 - 5270746 - | hypothetical protein SCO4839 5271519 - 5272538 + | tryptophanyl-tRNA synthetase SCO4840 5272715 - 5273293 + | secreted protein SCO4841 5274146 - 5273376 - | short-chain dehydrogenase SCO4842 5275539 - 5274166 - | oxidoreductase SCO4843 5275682 - 5276191 + | integral membrane protein SCO4844 5276184 - 5277152 + | phosphoribose diphosphate:decaprenyl-phosphate phosphoribosyltransferase SCO4845 5277146 - 5277619 + | integral membrane protein SCO4847 5279761 - 5278487 - | D-alanyl-D-alanine carboxypeptidase SCO4846 5277574 - 5278539 + | integral membrane protein SCO4848 5279853 - 5280092 + | integral membrane protein TERM 1670 5280308 - 5280341 + G 72 -14.5 -3.35679 | gap 1 CTGGCTGCTGGCGGT CGGGGCGCTGGT-CGC CGA GCGCGCGGGCGCCCCG TTCTGGCTCCAGCGG TERM 1671 5280929 - 5280872 - g 73 -15.6 -3.24747 | gap 2 CGTCGACACGATCAA CTCCACGCAGCC--CGACCTGATCGCCG TCGT CGGCGACCTGGTGGACGGCAGCGTGAAG GACCTCGGCCCGGCC SCO4849 5280147 - 5281457 + | integral membrane protein SCO4850 5282203 - 5281448 - | TetR family transcriptional regulator SCO4851 5282703 - 5282215 - | hypothetical protein SCO4852 5283115 - 5282708 - | integral membrane protein TERM 1672 5283151 - 5283170 + r 74 -4.2 -4.58283 | CGTTCAAAACGCTGA CAGGACTG ACTG TAGACCTG TTTTTGAACACGTTC SCO4853 5283611 - 5283201 - | hypothetical protein SCO4854 5284273 - 5283653 - | integral membrane protein sdhB 5285212 - 5284439 - | succinate dehydrogenase iron-sulfur subunit sdhA 5286966 - 5285212 - | succinate dehydrogenase flavoprotein subunit SCO4857 5287468 - 5286986 - | succinate dehydrogenase membrane subunit SCO4858 5287854 - 5287474 - | succinate dehydrogenase membrane subunit SCO4859 5288587 - 5288036 - | putative OHCU decarboxylase SCO4860 5288869 - 5290443 + | secreted hydrolase SCO4861 5290562 - 5291107 + | hypothetical protein SCO4862 5291195 - 5291764 + | hypothetical protein SCO4863 5291932 - 5292354 + | hypothetical protein TERM 1673 5292351 - 5292400 + F 100 -23.6 -3.50393 | gap 1 CGCCACGGCGCCCCG GTGACGCCGGG-CGTCCGGGGCC ACCAC GGCCCCGGACGTCCCAGTGACAC TTCTGTGCGCTCCGA SCO4864 5292421 - 5293098 + | ECF sigma factor SCO4865 5293095 - 5294015 + | hypothetical protein TERM 1674 5294145 - 5294098 - f 78 -18.2 -2.62616 | opp_overlap 5294101 5294102 5294138, overlap 5294100 CCACCCCCCACAGGA GAGGCCCCGGCCGTCGCGCGGC ACGG GCCGCGCGGCGGCCCGTACTCC CTTCAGCGCCGGGAG TERM 1675 5294143 - 5294100 - f 77 -17.2 -2.8547 | opp_overlap 5294101 5294102 5294138, overlap 5294098 ACCCCCCACAGGAGA GGCCCCGGCCGTCGCGCGGC ACGG GCCGCGCGGCGGCCCGTACT CCCTTCAGCGCCGGG TERM 1676 5294101 - 5294142 + F 85 -20.7 -2.52464 | opp_overlap 5294100 5294098, overlap 5294102 5294138 CCCCCCACAGGAGAG GCCCCGGCCGTCGCGCGGC ACGG GCCGCGCGGCGGCCCGTAC TCCCTTCAGCGCCGG TERM 1677 5294138 - 5294164 + F 81 -8.6 -4.52857 | opp_overlap 5294100 5294098, overlap 5294101 5294102 GGCCGCGCGGCGGCC CGTACTCCCTTC AGC GCCGGGAGTGCG TTTTCTGTCACACCT TERM 1678 5294930 - 5294879 - g 71 -12.9 -3.54129 | gap 2 GAGACCCTGGGCAAA CGGCCGGGCGCCGTCCGCACGGCGG CGCA CCGCGGC-CTGA-AGCGCCTGGCCG AACTGCTCGGCGGCG SCO4866 5294399 - 5295061 + | ECF sigma factor SCO4867 5295061 - 5296242 + | hypothetical protein TERM 1679 5296256 - 5296290 + T 87 -8.5 -4.82901 | gap 1 AACTAGCCCACTTGA TCCCCTCTGACCTGCG CTTT CGTGGG-CGGCGGGGA TTTTTCTCGCCGGGG SCO4868 5297330 - 5296485 - | lipoprotein SCO4869 5297557 - 5299161 + | methylmalonyl CoA mutase SCO4870 5300632 - 5299181 - | hypothetical protein TERM 1680 5301268 - 5301221 - g 87 -19.9 -3.15544 | gap 2, opp_overlap 5301217 TTCGACGTGGAGGAA CGCGCCCGCCTGCTGGCCGAC TACCCCCT GACGGCC-GC-GGCGGGCGCG GAGATCTTCACGGAC SCO4871 5300705 - 5301355 + | TetR family transcriptional regulator SCO4872 5302356 - 5301340 - | hypothetical protein SCO4873 5303406 - 5302468 - | hypothetical protein TERM 1681 5303283 - 5303335 + g 72 -16.2 -2.89564 | CGGTGTCCGCGGTCG CCGGGGCGGCGGAGCGGC-GGACCGC CGA GCGGACCTGCCGCT-CGATGCGCTGG TCTATGAGGTCGGCG TERM 1682 5303794 - 5303850 + G 77 -16.5 -3.28712 | gap 2, opp_overlap 5303782 AATCGCTCAACCCTG CGCGGCAGACCGCGACAGGCCGCCGCG CTGCT CGCGGCGGCCC-TCACCGTC-GCCTCG TTCTGCGCGGCCGAC TERM 1683 5305955 - 5305935 - g 74 -16.1 -3.14132 | overlap 5305920 GGCCCCCCGCACGAA GGCCGCCGC CGC ACGGCGGCC GACGATCGCGGCCCA SCO4874 5303719 - 5306604 + | integral membrane protein SCO4875 5306624 - 5307574 + | sugar transferase TERM 1684 5308016 - 5307983 - g 77 -15.4 -3.53012 | gap 2, opp_overlap 5308014 CGCCCGGGCCCGAAA CGGCAAGGGCGTCCGC CGAG GCGGACGCCCT--CCG GTGACCGCGGCCCGA SCO4876 5307574 - 5308020 + | sugar translocase SCO4877 5309379 - 5308045 - | hypothetical protein SCO4878 5310356 - 5309376 - | glycosyltransferase TERM 1685 5311330 - 5311302 - g 73 -11 -3.96148 | gap 1, overlap 5311303 CTGCCCTATCAGAAA CTGGTGCAGCGGG CCGA CCCGCCGC-CCAA CTTCCGCCTGGTCTA SCO4879 5310555 - 5311886 + | hypothetical protein SCO4880 5312075 - 5313349 + | transferase TERM 1686 5314287 - 5314229 - g 71 -11 -3.71848 | gap 4, opp_overlap 5314255 CGGCCCGATGAAGAA GCTGCGCCGCGTCACCGGCGTCG-TCGCCG AGG CGGAGATCGCCGCCGCCG-CG-GGCG-AGC CCGTCACCGTCTGAT SCO4881 5313363 - 5314301 + | polysaccharide biosynthesis related protein SCO4882 5314345 - 5315412 + | hypothetical protein SCO4883 5315652 - 5316884 + | peptidase TERM 1687 5317808 - 5317784 - g 71 -9.2 -3.83568 | gap 1, opp_overlap 5317800 CCAGATCGAGAAGAA GGCCGACGTCG TGTA CG-CGGCGGCC GGTCTCTCCGGTCAG SCO4884 5317104 - 5318147 + | lipoprotein TERM 1688 5318204 - 5318175 - f 76 -15.7 -3.1637 | opp_overlap 5318176 ACACACCCGCACGAA GCGGACGGACACC TCCC GGTGCCCGTCCGT TTCCGCGTCTCGCGC TERM 1689 5318176 - 5318203 + F 90 -17 -3.59262 | opp_overlap 5318175 CACACCCGCACGAAG CGGACGGACACC TCCC GGTGCCCGTCCG TTTCCGCGTCTCGCG TERM 1690 5319128 - 5319104 - g 71 -9.2 -3.83568 | gap 1, opp_overlap 5319120 CCAGATCGAGAAGAA GGCCGACGTCG TGTA CG-CGGCGGCC GGTCTCTCCGGTCAG SCO4885 5318421 - 5319467 + | lipoprotein TERM 1691 5319578 - 5319595 + F 76 -8.4 -4.1899 | TCCCCGTACCCCGTC GCGTCG ATGTGC CGACGC TTTTGGATGCCGTAG SCO4886 5319704 - 5321317 + | sugar ABC transporter ATP-binding protein SCO4887 5321317 - 5322441 + | sugar ABC transporter integral membrane protein SCO4888 5322438 - 5323712 + | sugar ABC transporter integral membrane protein SCO4889 5323709 - 5324101 + | cytidine deaminase TERM 1692 5324797 - 5324758 - g 93 -22.2 -3.14132 | CGGCGCCTTCATGAA GACCATCGAGGACGCCCG CGAA CTGGCGTCCACGATGGTC GGCCTCGGCACCGAC deoA 5324126 - 5325409 + | thymidine phosphorylase SCO4891 5325853 - 5325467 - | secreted protein SCO4892 5326034 - 5327032 + | regulatory protein SCO4893 5328004 - 5327081 - | transport integral membrane protein SCO4894 5328414 - 5328163 - | hypothetical protein TERM 1693 5328205 - 5328237 + g 77 -16.4 -3.28924 | gap 2 GCCGTACTCGTGCTG CCGGGGCCCGTCTCCC GTG GGGAGACG--CCCCGG TTCTGCGACGAGGTG SCO4895 5329422 - 5328418 - | RNA polymerase factor sigma-70 SCO4896 5330840 - 5329530 - | transport integral membrane protein SCO4897 5330904 - 5331857 + | transcriptional regulator SCO4898 5332572 - 5331991 - | TetR family transcriptional regulator SCO4899 5332682 - 5333560 + | hypothetical protein SCO4900 5334410 - 5333649 - | hypothetical protein TERM 1694 5334596 - 5334569 - g 72 -14.1 -3.39595 | overlap 5334572 CCGAAGCACCGAGAA GAGCGCCGCGG CGAACC CCGCGGCGGTC TCGAAGACACCGTCG SCO4901 5334546 - 5335736 + | adenosine deaminase TERM 1695 5335790 - 5335762 - f 73 -11 -3.76641 | opp_overlap 5335762 5335763, overlap 5335756 5335763 ACGGTAATACGGAAA CGCGGACGGACA TTCAC CATCCGTCCGCA TTTCGATGTTTGCCG SCO4902 5335877 - 5336245 + | secreted protein SCO4903 5336536 - 5336333 - | hypothetical protein SCO4904 5337183 - 5336632 - | integral membrane protein TERM 1696 5337314 - 5337339 + r 70 -13.3 -3.39895 | gap 1 GGTGCGGCCCGTCAG CCGCCCG-TGAC CTC GTCGGCGGGCGG TTCGTTGCTGCCCGG SCO4905 5337921 - 5337310 - | lipoprotein SCO4906 5339528 - 5337921 - | sensor kinase protein TERM 1697 5339153 - 5339190 + g 70 -14.7 -3.28712 | overlap 5339154 5339181 GCGCGACGCCGCCCA GGCCGCCGGAACTGCCG TACA CGGCGGTGCCGTCGGCG TTCTCGGCGACCAGC TERM 1698 5339154 - 5339189 + g 73 -18.2 -2.57132 | overlap 5339153 5339181 CGCGACGCCGCCCAG GCCGCCGGAACTGCCG TACA CGGCGGTGCCGTCGGC GTTCTCGGCGACCAG SCO4907 5340202 - 5339525 - | transcriptional regulatory protein TERM 1699 5339716 - 5339684 - G 82 -19.1 -3.15861 | CACCAGCCGCAGCAA CTGCTGCCGGGACAG CGC CTGTCCCGGCCGCCG GCTCAGCTCCAGGAG TERM 1700 5340534 - 5340491 - H 86 -18 -3.28712 | CCGGGGTTCCGAGAA GTCCGGTGCCGTGAGCGGGC GGGG GTGCGCTCGCGGCACCGGGC GTCAGCACACCGCGT SCO4908 5340552 - 5341142 + | RNA polymerase sigma factor TERM 1701 5341367 - 5341323 - T 100 -20.8 -3.53444 | gap 1 CCACGGGGGTGGAAA GGGAGCGGGACTGGA-GGGCC GGGG GGTCCGTCCAGTCCCGCTTCC GCATGCGGGGGCAGG SCO4909 5342161 - 5341385 - | ATP-binding protein SCO4910 5342180 - 5342584 + | hypothetical protein TERM 1702 5342601 - 5342636 + F 100 -21.9 -3.65351 | GCGTCCTGCGCACGC CGGGCCGCGATCCCT CCGAGC GGGGGTCGCGGCCCG TTTCCGTCGCGGTGG TERM 1703 5343707 - 5343756 + G 74 -16.9 -3.05384 | gap 1 GCCCGCCTCGGGGCC CGTGC-CGGCGGTGACCGCGGCGG TGC CCGCCGCGTCCTCCTCCGGGCCCG TTCCCTCCGCGGCCG SCO4911 5342742 - 5344754 + | bifunctional protein TERM 1704 5344791 - 5344756 - T 100 -24.1 -3.05384 | overlap 5344758 GCTCGGCCGAGTGAA GACCGCGGCTCCTCC GGACGG GGAGGAGCCGCGGCC CGTCGGCGTCGATGC TERM 1705 5344789 - 5344758 - T 100 -23.1 -3.08679 | overlap 5344756 TCGGCCGAGTGAAGA CCGCGGCTCCTCC GGACGG GGAGGAGCCGCGG CCCGTCGGCGTCGAT SCO4912 5345741 - 5344860 - | aldehyde dehydrogenase SCO4913 5347194 - 5345752 - | aldehyde dehydrogenase SCO4914 5348195 - 5347200 - | deoxyribose-phosphate aldolase SCO4915 5348311 - 5349015 + | integral membrane protein TERM 1706 5349091 - 5349115 + T 100 -22.9 -4.13767 | CGGTGGGTGAGGGTG GCCGGGGGTGC GTT GCACCCCCGGC TTTTCAGATGCCGGC SCO4916 5350768 - 5349119 - | phosphomannomutase SCO4917 5351948 - 5351124 - | purine nucleoside phosphorylase SCO4918 5352479 - 5352042 - | hypothetical protein SCO4919 5352587 - 5354014 + | flavoprotein disulfide reductase SCO4920 5354229 - 5355182 + | DeoR family transcriptional regulator TERM 1707 5355217 - 5355259 + T 100 -32.1 -2.82516 | CGCCGGGCAGTGGCA GGGGCGCCCGGCGGACCGT GTGAG GTGGTCCGCCGGGCGCCCC TGTCGTGGTGCGGGA SCO4921 5357055 - 5355283 - | acyl-CoA carboxylase complex A subunit TERM 1708 5357259 - 5357273 + H 74 -4.9 -4.56367 | overlap 5357254 CTCTGTAAGGGCGTG CTGCG GGCCA CGCGG TTTCTTTGTGGAGTC SCO4922 5357430 - 5357912 + | integral membrane protein SCO4923 5358501 - 5357881 - | hypothetical protein SCO4924 5358662 - 5358534 - | hypothetical protein SCO4925 5359008 - 5358799 - | hypothetical protein SCO4926 5360610 - 5359018 - | propionyl-CoA carboxylase complex B subunit TERM 1709 5360328 - 5360308 - G 70 -14.7 -3.29461 | GAAGTCCTGGGAGAA GACGGCCAC GGG GCGGCCGTC GACGGTGCCGTAGCC SCO4927 5360721 - 5361596 + | ligase SCO4928 5361712 - 5362857 + | adenylate cyclase SCO4929 5363586 - 5362921 - | hypothetical protein SCO4930 5363797 - 5364597 + | enoyl-CoA hydratase SCO4931 5364745 - 5365845 + | hypothetical protein TERM 1710 5366548 - 5366532 - g 70 -13.7 -3.29144 | CGAGCTGCGCGAGAA GGAGGGC CTC GCCCTCC TCAACGGCACCGACG hutH 5365963 - 5367501 + | histidine ammonia-lyase SCO4933 5367731 - 5368444 + | hypothetical protein TERM 1711 5368467 - 5368492 + F 100 -23.3 -3.81951 | opp_overlap 5368434 5368432 5368461 5368460 TGGGGAAATTCCTGA CCCCGGGCGGC AACC GCCGCCCGGGG TTTCGTCGTCTCACG SCO4934 5368677 - 5369921 + | lipoprotein TERM 1712 5369951 - 5369996 + F 100 -29.8 -3.56099 | gap 1, overlap 5369955 5369989 GGGCCGACCGCACTT CGCACGGGCGCCCGCCACCCC TCGCC GGGGCGGCGGGCGCCCGT-CG TTTCCCGGGCTTCTC TERM 1713 5369955 - 5369993 + F 100 -30.3 -2.90992 | overlap 5369951 5369989 CGACCGCACTTCGCA CGGGCGCCCGCCACCCC TCGCC GGGGCGGCGGGCGCCCG TCGTTTCCCGGGCTT SCO4935 5370069 - 5371559 + | integral membrane protein SCO4936 5371593 - 5372276 + | ABC transporter ATP-binding protein SCO4937 5372819 - 5372301 - | hypothetical protein SCO4938 5373018 - 5373932 + | ECF-sigma factor SCO4939 5374758 - 5373976 - | hypothetical protein TERM 1714 5374802 - 5374851 + H 100 -29.6 -3.65425 | opp_overlap 5374830, overlap 5374793 5374804 CGGTGGAACCCGGAC GTTAGCGTACGGGCGTTCGCTA AATCAA TAGCGAACGCCCGTACGCTATC TTTGCCGTATGTCAC TERM 1715 5374804 - 5374849 + H 100 -30.8 -3.40558 | opp_overlap 5374830, overlap 5374793 5374802 GTGGAACCCGGACGT TAGCGTACGGGCGTTCGCTA AATCAA TAGCGAACGCCCGTACGCTA TCTTTGCCGTATGTC SCO4940 5374860 - 5375462 + | TetR family transcriptional regulator SCO4941 5375783 - 5375466 - | hypothetical protein SCO4942 5376644 - 5375964 - | regulatory protein SCO4943 5376765 - 5377757 + | oxidoreductase SCO4944 5378730 - 5377855 - | DNA-binding protein SCO4945 5378899 - 5379939 + | dehydrogenase TERM 1716 5379941 - 5379964 + F 72 -5.8 -4.44461 | overlap 5379943 5379956 CCGCGACGATCTGAT CCCTCCCGGG AGAG CCCGGGGAAG TTTTCTCGGATTCTT SCO4946 5380116 - 5380907 + | hypothetical protein TERM 1717 5381417 - 5381450 + G 91 -13.7 -4.30576 | overlap 5381420 TCCCGACCGGCCCGA GTACGAGCCGCGCGG CTGT CCGCGCGGCGCCTCC TTTTCCTGGTACACC SCO4947 5381148 - 5384831 + | nitrate reductase alpha chain NarG3 SCO4948 5384840 - 5386486 + | nitrate reductase beta chain NarH3 SCO4949 5386483 - 5387145 + | nitrate reductase delta chain NarJ3 SCO4950 5387142 - 5387855 + | nitrate reductase gamma chain NarI3 SCO4951 5388935 - 5387898 - | aldoketoreductase SCO4952 5389080 - 5389676 + | TetR family transcriptional regulator SCO4953 5389724 - 5389918 + | hypothetical protein SCO4954 5390534 - 5389941 - | hypothetical protein SCO4955 5391852 - 5390665 - | ATP/GTP-binding protein SCO4956 5392010 - 5392528 + | methionine sulfoxide reductase A TERM 1718 5392592 - 5392563 - T 85 -20.7 -2.63102 | ACGAGGCCGACAGGA CGCGGTCTGGCCG GTGA CGGCCGGACCGCG TCGTCGTGAGCGCGC SCO4957 5393750 - 5392632 - | hypothetical protein SCO4958 5393841 - 5395001 + | cystathionine gamma-synthase SCO4959 5395269 - 5395012 - | hypothetical protein SCO4960 5395822 - 5395316 - | sigma factor SCO4961 5396505 - 5396005 - | MarR family transcriptional regulator SCO4962 5396674 - 5397903 + | threonine dehydratase SCO4963 5398064 - 5399071 + | ABC transporter ATP-binding protein SCO4964 5399068 - 5399925 + | integral membrane transport protein SCO4965 5400524 - 5400027 - | transcription elongation factor TERM 1719 5400596 - 5400560 - R 82 -15.1 -3.69341 | opp_overlap 5400563, overlap 5400556 GGGAATACAAATCAA CGCCCTACCCAGAAGGA TGT TCCTTCACGGAAGGGCG AAACCACGAGCCTAA SCO4966 5401103 - 5400705 - | hypothetical protein SCO4967 5401234 - 5402115 + | hypothetical protein SCO4968 5402117 - 5402344 + | hypothetical protein SCO4969 5405884 - 5402381 - | regulatory protein SCO4970 5406039 - 5405887 - | hypothetical protein SCO4971 5406195 - 5407688 + | dehydrogenase SCO4972 5407685 - 5410105 + | dehydrogenase SCO4973 5410107 - 5410928 + | hypothetical protein SCO4974 5411121 - 5411624 + | deaminase SCO4975 5411702 - 5413762 + | hypothetical protein SCO4976 5414501 - 5413773 - | hypothetical protein SCO4977 5415242 - 5414535 - | TetR family transcriptional regulator SCO4978 5416001 - 5415297 - | integral membrane protein TERM 1720 5416282 - 5416268 - H 95 -3.5 -5.4505 | GCCTCCAACAAAAAA CCCCT CATCT AGGAG CAATCGTGGCGCGCG SCO4979 5416288 - 5418117 + | phosphoenolpyruvate carboxykinase SCO4980 5419350 - 5418400 - | hypothetical protein SCO4981 5420747 - 5419347 - | bifunctional protein SCO4982 5420938 - 5421120 + | hypothetical protein SCO4983 5421628 - 5421206 - | hypothetical protein TERM 1721 5421629 - 5421661 + r 75 -17.1 -2.56273 | overlap 5421624 5421656 GATCGGCTCGTACAT GGATGGCCTCCTGAG TGC TTCAGGAAGCCATCC TACATTAGATCTAAT SCO4984 5422911 - 5421700 - | aminotransferase AlaT SCO4985 5423145 - 5423999 + | hypothetical protein SCO4986 5425647 - 5424037 - | D-aminoacylase SCO4987 5426977 - 5425676 - | D-amino acid deaminase TERM 1722 5427910 - 5427940 + G 70 -16 -2.55351 | overlap 5427909 TCGACGTCGTCGCCG CCGTCGGCGCGGGC GAC GCCTTCGCCGCCGG GTTCCTCTCCGCCAC SCO4988 5427114 - 5428169 + | carbohydrate kinase SCO4989 5428166 - 5428930 + | IclR family transcriptional regulator SCO4990 5428927 - 5429337 + | hypothetical protein SCO4991 5429458 - 5430936 + | sugar transport integral membrane protein SCO4992 5431032 - 5431676 + | hypothetical protein TERM 1723 5431969 - 5432005 + G 81 -19.4 -3.02511 | ATCTCCCTCGCCGAG GCGTGCGGCCGCTGGC ACCTG GCCACCGGCCGCACCC TCTTCGACGGCTGGG SCO4993 5431696 - 5433066 + | metal ion transport protein SCO4994 5433210 - 5434163 + | hypothetical protein SCO4995 5435480 - 5434218 - | hypothetical protein SCO4996 5436069 - 5435560 - | RNA polymerase ECF sigma factor SCO4997 5436359 - 5436168 - | hypothetical protein SCO4998 5437222 - 5436371 - | hypothetical protein SCO4999 5437435 - 5437923 + | hypothetical protein SCO5000 5438306 - 5438614 + | hypothetical protein TERM 1724 5439129 - 5439153 + GT 70 -13.5 -3.23692 | opp_overlap 5439124 CGCGACAGGACTGCG CGTCGCGGCCG GTA TGGCCGTGGCG TTGATCGTGGTGCTG SCO5002 5439835 - 5439185 - | hypothetical protein SCO5001 5438611 - 5439252 + | integral membrane protein SCO5003 5441678 - 5439963 - | chitinase A precursor SCO5004 5441997 - 5442938 + | hypothetical protein SCO5005 5443213 - 5443824 + | hypothetical protein SCO5006 5443832 - 5445088 + | septum site-determining protein SCO5007 5445085 - 5445480 + | septum site-determining protein SCO5008 5445482 - 5445877 + | septum site-determining protein SCO5009 5445896 - 5447233 + | secretory protein SCO5010 5447243 - 5448193 + | integral membrane protein SCO5011 5448213 - 5449115 + | integral membrane protein SCO5012 5449378 - 5449575 + | integral membrane protein TERM 1725 5449765 - 5449747 - g 74 -11.7 -3.74693 | CCGCAGCGCAGGAAA CCCGCGA TCAGC TCGCGGG GGAGTGGGTGGACAA SCO5013 5449578 - 5450174 + | secreted protein SCO5014 5450207 - 5450785 + | secreted protein SCO5015 5450794 - 5451405 + | secreted protein SCO5016 5452318 - 5451503 - | integral membrane protein SCO5017 5452526 - 5453623 + | AraC family transcription regulator SCO5018 5453774 - 5453983 + | integral membrane protein SCO5019 5454598 - 5453993 - | secreted protein SCO5020 5454591 - 5455127 + | hypothetical protein SCO5021 5455315 - 5455980 + | lipoprotein SCO5022 5456221 - 5456883 + | lipoprotein SCO5023 5456892 - 5457902 + | secreted protein SCO5024 5458019 - 5458891 + | oxidoreductase SCO5025 5458994 - 5459911 + | transcriptional regulator SCO5026 5459908 - 5460726 + | hypothetical protein SCO5027 5461950 - 5460757 - | hypothetical protein TERM 1726 5462589 - 5462624 + H 100 -19.1 -5.24129 | GTGGAACCCCCCCCT CGGGCCGGTCCGT CTCCCCCCCC ACGGACCGGCCCG TTTTTTCTGCCCGGG SCO5028 5463012 - 5464337 + | ATP-binding protein SCO5029 5464767 - 5465483 + | secreted protein TERM 1727 5465537 - 5465563 + F 85 -16.6 -3.57144 | GCTCAACCTCGCGCA GCCCCTCACCGT CTT GTGGTGAGGGGC TTTCGCGCTCCCGCC TERM 1728 5467003 - 5467051 + G 74 -11.5 -3.76373 | overlap 5467032 GGCCGCCGAAGCCCC CGGCACCCCCGGCGGACGGCC CGCCGTC GGACGCCCCCTAGGGGTGTCG TTTGGATCTTGCCGG SCO5030 5465646 - 5467043 + | integral membrane protein SCO5031 5467868 - 5467332 - | hypothetical protein SCO5032 5468429 - 5467875 - | alkyl hydroperoxide reductase SCO5033 5468567 - 5469505 + | hydrogen peroxide sensing regulator SCO5034 5471969 - 5469633 - | integral membrane protein SCO5035 5472661 - 5471972 - | ABC transporter ATP-binding protein SCO5036 5473182 - 5472658 - | hypothetical protein SCO5037 5473671 - 5473366 - | hypothetical protein SCO5038 5474606 - 5473668 - | integral membrane protein TERM 1729 5474904 - 5474879 - H 88 -9.6 -4.67943 | overlap 5474880 5474881 GCGGAAGAGAGAAAA GCGCGGCAGC GCGGTG GACGCCGCGC GGCGCCGAAACGCCG SCO5039 5475026 - 5477176 + | penicillin-binding protein SCO5040 5479528 - 5477315 - | hypothetical protein SCO5041 5480535 - 5479825 - | hypothetical protein fumC 5482009 - 5480624 - | fumarate hydratase SCO5043 5483561 - 5482101 - | hydrolase membrane protein TERM 1730 5483722 - 5483695 - R 93 -17.7 -3.75153 | CGGGGGGAAGCGAAA GGCCGGCCCGG ACGGAG CCGGACCGGCC TGCTGCCCAGGAGTG SCO5044 5485418 - 5483742 - | fumarate hydratase class I SCO5045 5485654 - 5486337 + | hypothetical protein SCO5046 5486443 - 5486820 + | hypothetical protein TERM 1731 5486878 - 5486823 - T 91 -20 -3.28712 | gap 2, opp_overlap 5486838, overlap 5486824 5486838 GGCGGCCGGCTAGAA CCCAGACACCCGAAAGGGCACCCTCT CCGCAC AGAGGGTGCCCTTTCGA-CGCC-GGG CCGCCGCCGACCCGG TERM 1732 5486878 - 5486824 - T 85 -20.2 -2.57132 | gap 1, opp_overlap 5486838, overlap 5486823 5486838 GCGGCCGGCTAGAAC CCAGACACCCGAAAGGGCACCCTCT CCGCAC AGAGGGTGCCCTTTCGA-CGCCGGG CCGCCGCCGACCCGG TERM 1733 5486865 - 5486838 - T 90 -17.1 -3.65425 | opp_overlap 5486838, overlap 5486823 5486824 CCCAGACACCCGAAA GGGCACCCTCT CCGCAC AGAGGGTGCCC TTTCGACGCCGGGCC TERM 1734 5486838 - 5486865 + T 85 -17.1 -3.53012 | opp_overlap 5486838 5486823 5486824 CCCAGACACCCGAAA GGGCACCCTCT CCGCAC AGAGGGTGCCC TTTCGACGCCGGGCC glpX 5488108 - 5487077 - | fructose 1,6-bisphosphatase II SCO5048 5488244 - 5488768 + | secreted protein SCO5049 5489422 - 5488832 - | hypothetical protein TERM 1735 5490938 - 5490917 - g 71 -15.1 -3.14132 | CGGCCCGCTCACCAA GGCGGCGGC GCGG GCCGCCACC GGCGTCCCTCCCGCG SCO5050 5489640 - 5490971 + | nucleotide-sugar dehydrogenase SCO5051 5490968 - 5492431 + | glycosyltransferase SCO5052 5492428 - 5492535 + | hypothetical protein SCO5053 5492532 - 5494091 + | secreted protein SCO5054 5494102 - 5494416 + | hypothetical protein SCO5055 5494679 - 5494413 - | exodeoxyribonuclease VII small subunit xseA 5495897 - 5494689 - | exodeoxyribonuclease VII large subunit SCO5057 5497856 - 5496474 - | amino acid permease ispH 5497985 - 5499001 + | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase TERM 1736 5499127 - 5499096 - g 71 -15.8 -3.14931 | CGGATCCGGGATCAA GGGCGCCCCTGTGG ACCT CGACAGGGGCGACC TGGCCCAGGAGCGCT SCO5059 5499055 - 5499795 + | polyphosphate glucokinase SCO5060 5500408 - 5499806 - | integral membrane protein SCO5061 5500594 - 5501682 + | translation-associated GTPase TERM 1737 5501694 - 5501735 + T 73 -10.8 -3.85698 | gap 1, opp_overlap 5501697 5501698, overlap 5501697 5501697 GTGACGTTTCGTCAA GAACCGTGCCCGACCC-GC CTGTT GCTGGGTCGGGCACAAGTC TTTGTCCGCGGGGAG TERM 1738 5501732 - 5501697 - T 82 -15.5 -3.61517 | gap 1, opp_overlap 5501694 5501697 5501697, overlap 5501698 ACGTTTCGTCAAGAA CCGTGCCCGACCC-GC CTGTT GCTGGGTCGGGCACAA GTCTTTGTCCGCGGG TERM 1739 5501731 - 5501698 - T 76 -16.8 -2.76696 | gap 1, opp_overlap 5501697 5501697 5501694, overlap 5501697 CGTTTCGTCAAGAAC CGTGCCCGACCC-GC CTGTT GCTGGGTCGGGCACA AGTCTTTGTCCGCGG SCO5062 5502196 - 5501804 - | hypothetical protein SCO5063 5502447 - 5502196 - | hypothetical protein SCO5064 5502446 - 5504848 + | bifunctional protein SCO5065 5507768 - 5504937 - | transcriptional regulator TERM 1740 5508043 - 5508026 - H 75 -12.7 -3.61517 | opp_overlap 5508010 5508026 5508039 ACCCTTGCGGAACAA GGGCGTG CGTT CACGCCC GACCTTCTGGAGATC SCO5066 5508078 - 5508992 + | beta-lactamase SCO5067 5509015 - 5510508 + | carboxylesterase SCO5068 5511115 - 5510516 - | TetR family transcriptional regulator SCO5069 5511271 - 5512227 + | oxidoreductase SCO5070 5513452 - 5512268 - | hydroxylacyl-CoA dehydrogenase SCO5071 5514249 - 5513809 - | hydroxylacyl-CoA dehydrogenase SCO5072 5514323 - 5515246 + | hydroxylacyl-CoA dehydrogenase SCO5073 5515243 - 5516232 + | oxidoreductase SCO5074 5516299 - 5516943 + | dehydratase SCO5075 5516977 - 5517897 + | oxidoreductase SCO5076 5517894 - 5519495 + | integral membrane protein SCO5077 5519497 - 5519892 + | hypothetical protein SCO5078 5519987 - 5520832 + | hypothetical protein TERM 1741 5520932 - 5520874 - g 71 -9.3 -3.84406 | GCCCGATGAGAACAA GCCCGTACTGGTCCTCGGCGCCACC GGAAAGCAA GGCGGCTCCGCGGCCCGGTACCTGC TGGAACGCGGCTGGA SCO5079 5520857 - 5521741 + | hypothetical protein SCO5080 5521738 - 5522883 + | hydrolase SCO5081 5522876 - 5523217 + | hypothetical protein SCO5082 5523962 - 5523183 - | transcriptional regulatory protein TERM 1742 5523366 - 5523416 + g 82 -18.4 -3.17571 | gap 3, opp_overlap 5523395 GGCCGGCAGTGACTT CAGGTAGCCGTGGAGCTGGTCGGCG AACA CGCCGGCCTGCTCC-CGGC--CCTG TTCCGTTCCGGGGTT TERM 1743 5524007 - 5524037 + H 82 -18.4 -3.14564 | CACCGTTTCTTGACG CGACCACCGTTCCA TTG TAGAACGGTGGTCG TTCGTGGACCAATAG SCO5083 5524073 - 5525809 + | actinorhodin transporter SCO5084 5525809 - 5527944 + | hypothetical protein TERM 1744 5527987 - 5527958 - f 100 -16.7 -4.79667 | opp_overlap 5527958 AAAATCCAGCAAAAA TTAATCAGTGCAG CTCG CTGCACTGATTAA TTTTTGATCAATAGG TERM 1745 5527958 - 5527987 + F 100 -16.7 -4.7497 | opp_overlap 5527958 AAAATCCAGCAAAAA TTAATCAGTGCAG CTCG CTGCACTGATTAA TTTTTGATCAATAGG SCO5085 5528094 - 5528861 + | actinorhodin cluster activator protein SCO5086 5529720 - 5528935 - | ketoacyl reductase SCO5087 5529801 - 5531204 + | actinorhodin polyketide beta-ketoacyl synthase alpha subunit SCO5088 5531201 - 5532424 + | actinorhodin polyketide beta-ketoacyl synthase beta subunit SCO5089 5532449 - 5532709 + | actinorhodin polyketide synthase acyl carrier protein SCO5090 5532706 - 5533656 + | actinorhodin polyketide synthase bifunctional cyclase/dehydratase SCO5091 5533653 - 5534546 + | cyclase TERM 1746 5535023 - 5534986 - g 86 -18.4 -3.41051 | opp_overlap 5534983, overlap 5534987 GCACGTCGAGGAGAA GGGCGTACCGGCGGTC TACGTG GACCGCCGGTTCGCCG CCCTGTGCTCGGCGG TERM 1747 5535022 - 5534987 - g 86 -21.9 -2.64416 | opp_overlap 5534983, overlap 5534986 CACGTCGAGGAGAAG GGCGTACCGGCGGTC TACGTG GACCGCCGGTTCGCC GCCCTGTGCTCGGCG SCO5092 5534558 - 5535091 + | actinorhodin polyketide dimerase SCO5093 5535607 - 5535110 - | mini-circle protein SCO5094 5536287 - 5535661 - | methyltransferase SCO5095 5536422 - 5536994 + | DNA-binding protein SCO5096 5538175 - 5537246 - | LysR family transcriptional regulator SCO5097 5538270 - 5539100 + | short-chain oxidoreductase TERM 1748 5539466 - 5539490 + G 73 -14.9 -3.21416 | GTCGCCGCGCGCCCG CCGTCCGGCGC GCG GGGCCGGGCGG TTCGTCCTGGAGGTG SCO5098 5539158 - 5539622 + | integral membrane protein SCO5099 5539732 - 5540862 + | hypothetical protein SCO5100 5541010 - 5541762 + | GntR family regulatory protein TERM 1749 5542394 - 5542367 - g 95 -20.6 -3.86015 | gap 1, overlap 5542368 TACTGGGTCGAGAAA CTCGCCGCGCCCG GCG CGGGCGCGGCG-G ACTGACCCACCGCGG TERM 1750 5542394 - 5542368 - g 84 -20.8 -2.91395 | overlap 5542367 ACTGGGTCGAGAAAC TCGCCGCGCCCG GCG CGGGCGCGGCGG ACTGACCCACCGCGG SCO5101 5542208 - 5542399 + | hypothetical protein SCO5102 5542475 - 5542909 + | mutT-like protein SCO5103 5542948 - 5543415 + | regulatory protein SCO5104 5543715 - 5546357 + | hypothetical protein TERM 1751 5547689 - 5547722 + G 71 -9.3 -3.85698 | opp_overlap 5547681, overlap 5547687 GGAACCACGCGGAGA CCGTCGCCGCCGCCG TCCG CGGCGTCCGCCTCGG TTTGTCCCGCACGGA SCO5105 5546599 - 5547831 + | hypothetical protein SCO5106 5548607 - 5547828 - | fumarate reductase iron-sulfur subunit TERM 1752 5548099 - 5548112 + g 84 -9.5 -4.36554 | opp_overlap 5548093 5548092 ATGAGGAAGCGCGGG CCCGC GAAG GCGGG TTTGTTCTCCTCGTG sdhA 5550565 - 5548604 - | succinate dehydrogenase flavoprotein subunit SCO5108 5551418 - 5550582 - | integral membrane protein SCO5109 5551920 - 5551480 - | hypothetical protein SCO5110 5552093 - 5554408 + | lipoprotein SCO5111 5554541 - 5556448 + | GTP-binding protein TERM 1753 5556459 - 5556511 + F 100 -37.2 -3.01712 | GCTGACCCCACCGCA CGGCGGACGGCACCGGACCCCACG GTTCA CGTGGGGTCCGGTGCCGTTCGGCG TGTTGGCGACGCGGG SCO5112 5557355 - 5558386 + | BldKA, ABC transport system integral membrane protein SCO5113 5558498 - 5560300 + | BldKB, ABC transport system lipoprotein TERM 1754 5560351 - 5560318 - f 100 -25.3 -3.53012 | CGTCCGGTCGGGAAA CGGTGGCGGGCGCGC TGCG GAGCGCCCGCCACCG GGCCCGGACCGACTC SCO5114 5560414 - 5561391 + | BldKC, ABC transport system integral membrane protein SCO5115 5561402 - 5562463 + | BldKD, ABC transporter intracellular ATPase subunit SCO5116 5562491 - 5563636 + | peptide transport system ATP-binding subunit TERM 1755 5563702 - 5563645 - f 100 -35.1 -3.54475 | gap 1, opp_overlap 5563657 GGGCTGAGCACAGAA GGCAGCAGGGAAGGGCGGCGGCGGGAGC AGG ACTCCCGCCGCCGCCCTTCCGTA-TGCC GCCACACCTCCCGCA TERM 1756 5563657 - 5563691 + F 100 -30.1 -3.12351 | opp_overlap 5563645 GAAGGCAGCAGGGAA GGGCGGCGGCGGGAG CAGGA CTCCCGCCGCCGCCC TTCCGTATGCCGCCA SCO5117 5563836 - 5565470 + | peptide transport system secreted peptide-binding protein SCO5118 5565480 - 5566403 + | peptide transport system integral membrane protein SCO5119 5566459 - 5567376 + | peptide transport system integral membrane protein SCO5120 5567385 - 5568368 + | peptide transport system ATP-binding protein SCO5121 5568361 - 5569431 + | peptide transport system ATP-binding protein SCO5122 5571687 - 5569564 - | peptidase SCO5123 5571874 - 5572068 + | small membrane protein SCO5124 5572264 - 5572058 - | hypothetical protein SCO5125 5573124 - 5572261 - | hypothetical protein TERM 1757 5573621 - 5573584 - g 70 -14.1 -3.28712 | gap 1 GGGGCTGTCCGACAA CGACGAC-CCCGGCTGCC TGT GGCAGGCGGACGTCGACG CGGCCGCGGCCCTGC SCO5126 5573276 - 5574163 + | hypothetical protein SCO5127 5574160 - 5574582 + | integral membrane protein TERM 1758 5575065 - 5575009 - g 70 -16.5 -2.65442 | gap 3, overlap 5575000 5574988 ACAGCACGGAGACGA CGGGCG-AGCGG-CCCGCGC-CGGCGCC CAGC GCCGCCGCGCCCGGGGCCGCCGCTCCCG AGGCTCCCGCCGAGT SCO5128 5574738 - 5577065 + | hypothetical protein TERM 1759 5577114 - 5577079 - f 100 -27.6 -2.62396 | overlap 5577056 5577057 GACGCGGGCACAGGA GCGAGGGGCGCCCGGC AGCA GCGGGGCGCCCCTCGC GTCGCACCGGGCGCC SCO5129 5577212 - 5578168 + | ABC transporter ATP-binding protein SCO5130 5578165 - 5578905 + | ABC transporter integral membrane protein SCO5131 5578902 - 5580068 + | two-component system sensor kinase SCO5132 5580065 - 5580679 + | two-component system response regulator SCO5133 5581685 - 5580789 - | hypothetical protein SCO5134 5582761 - 5581727 - | hypothetical protein SCO5135 5582902 - 5583222 + | ferredoxin TERM 1760 5583242 - 5583297 + F 100 -32.1 -3.59979 | gap 1, opp_overlap 5583225 5583223 GGCCCGCACACGCGC CGCCTCGGTCCCGTACGGC-CTGATC ACCCC GATCGGCGCCGCACGGGACCGAGGCG TTTGCCGTACCGGCG SCO5136 5583339 - 5584436 + | N-succinyldiaminopimelate aminotransferase TERM 1761 5584630 - 5584600 - T 100 -24 -3.50853 | CGTGGGCAAGCAGAA CGCCGGGCCCCGGG AAC CCCAGGACCCGGCG CCGTACAGCCCGGCG SCO5137 5585086 - 5584655 - | ATP-binding protein TERM 1762 5585177 - 5585126 - R 87 -12 -4.24294 | overlap 5585116 AGCAACGATGGAAAA TCCGACCGGGCCCGGAGGGCGACC GGAG AGTGGCCGACCGGGCTCGGACGCA GTGACTACCGCTCGA TERM 1763 5585397 - 5585357 - R 71 -8.8 -4.08767 | opp_overlap 5585367 GTGAGGGTGCGAAAA CCCGTGCTCCGCGTCGAC TTCGC GCCGACGCGGGTCACTCG CGGAGATGACGCTTC SCO5138 5586392 - 5585424 - | hypothetical protein SCO5139 5586476 - 5587555 + | dipeptidase TERM 1764 5587748 - 5587702 - g 75 -12.9 -3.65046 | gap 1, overlap 5587703 CCCCGAGGGCAAGAA GCGGCCACCGGAGGAGCAGCGC CTGG GCCCCG-TCCTCCGGCGGCGGG GCCAGGTGCAGGAGA TERM 1765 5587747 - 5587703 - g 70 -16.4 -2.78813 | gap 1, overlap 5587702 CCCGAGGGCAAGAAG CGGCCACCGGAGGAGCAGCGC CTGG GCCCCG-TCCTCCGGCGGCGG GGCCAGGTGCAGGAG SCO5140 5587673 - 5588431 + | hypothetical protein SCO5141 5589566 - 5588682 - | dihydropteroate synthase SCO5142 5589711 - 5590070 + | secreted protein SCO5143 5590067 - 5590651 + | DNA-3-methyladenine glycosylase I TERM 1766 5590727 - 5590756 + T 81 -18.5 -3.02144 | overlap 5590749 CCCGCATTCACCGGG CCGCGGGTTGCCG TCCC CGGCCGCCCGCGG TCTTACCGGCGGTCC SCO5144 5592106 - 5591303 - | acyl CoA isomerase SCO5145 5592410 - 5592634 + | hypothetical protein TERM 1767 5592657 - 5592694 + T 100 -22.1 -3.62775 | overlap 5592660 GCGACCATACCCGTT CAGTCGCCCCGGTACCG TTCG CGGTGCCGGGGTGATTG TTCTTCCACGGTCGT TERM 1768 5592660 - 5592691 + T 100 -20.2 -3.94877 | overlap 5592657 ACCATACCCGTTCAG TCGCCCCGGTACCG TTCG CGGTGCCGGGGTGA TTGTTCTTCCACGGT TERM 1769 5592708 - 5592725 + T 70 -4.1 -4.386 | gap 1, overlap 5592710 TGTTCTTCCACGGTC GTTCC-CG GTG CGCGGGAC TTTTCTCCGGCGTTC SCO5146 5593269 - 5592745 - | methyltransferase SCO5147 5593690 - 5594361 + | RNA polymerase sigma factor SigE SCO5148 5594358 - 5595347 + | hypothetical protein SCO5149 5595838 - 5597466 + | protease SCO5150 5597613 - 5598098 + | sec-independent translocase SCO5151 5598255 - 5599001 + | hypothetical protein SCO5152 5600209 - 5599076 - | ATP-binding protein SCO5153 5600850 - 5600254 - | integral membrane protein SCO5154 5602144 - 5600843 - | hypothetical protein TERM 1770 5602273 - 5602331 + H 71 -15.2 -3.07816 | gap 1, overlap 5602276 CGCTCGGACGCGCTT CAG-GCTAGCCCGTCCCGATCGGCCTC GCCCTG GCGGCCGGTCCGGACGGACTGGCTCCG TTCGGTCCGTACGGC TERM 1771 5602276 - 5602327 + H 85 -20.1 -2.55213 | overlap 5602273 TCGGACGCGCTTCAG GCTAGCCCGTCCCGATCGGCCTC GCCCTG GCGGCCGGTCCGGACGGACTGGC TCCGTTCGGTCCGTA SCO5155 5602439 - 5603170 + | lipoprotein SCO5156 5603697 - 5603185 - | hypothetical protein SCO5157 5604846 - 5603731 - | metal-transport protein TERM 1772 5605110 - 5605100 - H 76 -8.2 -4.1822 | overlap 5605101 GGCGACGGGAAGAAA GCCG GTG CGGC TGCGTCAGCGGCGGG TERM 1773 5605957 - 5605918 - g 87 -22.2 -2.70932 | GCGCTGGCTGAACCA CGGGACGGACCTGCGCGA TCCG TCCCGCAGGTCCGTCCCC CTGGACTGACGCAGC SCO5158 5605370 - 5605966 + | hypothetical protein SCO5159 5607238 - 5606015 - | integral membrane transport protein TERM 1774 5607789 - 5607807 + G 76 -17.4 -2.88544 | GTACGCGGGCCTCGA CGGCCCGG ACC CCGGGCCG TATCTGGACGTCGAG SCO5160 5607430 - 5608080 + | hypothetical protein SCO5161 5608309 - 5609166 + | hypothetical protein SCO5162 5609220 - 5609825 + | integral membrane protein SCO5163 5610044 - 5609892 - | hypothetical protein SCO5164 5610280 - 5611185 + | hypothetical protein SCO5165 5612189 - 5611293 - | hydrolase SCO5166 5614939 - 5612300 - | helicase SCO5167 5615432 - 5616214 + | hypothetical protein SCO5168 5616599 - 5616330 - | integral membrane protein SCO5169 5617127 - 5616843 - | ATP-binding protein SCO5170 5617854 - 5617213 - | TetR family transcriptional regulator SCO5171 5618256 - 5618029 - | hypothetical protein SCO5172 5618484 - 5619560 + | hydrolase SCO5173 5619569 - 5621248 + | hypothetical protein TERM 1775 5621346 - 5621385 + F 79 -16.4 -3.3164 | overlap 5621349 CGACCGTTCACCCCT TTTGGTGGCGCGATGGAC AACC GTCCATCGCGCCACCTCC TTGTCCGCATACGTT TERM 1776 5621349 - 5621382 + F 95 -26.9 -2.83271 | overlap 5621346 CCGTTCACCCCTTTT GGTGGCGCGATGGAC AACC GTCCATCGCGCCACC TCCTTGTCCGCATAC TERM 1777 5621689 - 5621665 - g 81 -16.5 -3.53012 | overlap 5621680 CCCCGCTGTGGGAAA CCGTGGACGAC GGA ATCGTCCACGG ACGGCGCGCGCGCCG TERM 1778 5623024 - 5623073 + G 71 -14.9 -3.12351 | gap 1 TGGAGATCCTCTCTC GTGCACCGGTACGCC-GCGTCGTC CTC GACGGCGCCGGCGAACCCCTGCCC TTCGGTGTCCCCGCC SCO5174 5621463 - 5623244 + | transferase SCO5175 5623391 - 5624458 + | integral membrane protein SCO5176 5624510 - 5625622 + | reductase SCO5177 5625610 - 5626359 + | hypothetical protein SCO5178 5626423 - 5627601 + | molybdopterin biosynthesis-like protein MoeZ SCO5179 5629214 - 5627673 - | peptidase SCO5180 5630923 - 5629373 - | peptidase SCO5181 5633781 - 5631004 - | integral membrane protein SCO5182 5633823 - 5634374 + | hypothetical protein SCO5183 5634641 - 5638120 + | ATP-dependent DNA helicase TERM 1779 5639328 - 5639314 - g 70 -12.8 -3.35679 | GGCGCTCAGCGAGAA CCGCCG CAG CGGCGG CCGCCTCCTCGACCT TERM 1780 5640697 - 5640662 - g 74 -16.8 -3.14132 | overlap 5640682 5640683 GTCTGGGCGGACGAA CCGGCGGAGGACGAGG AGAA CCCCGCCCTGCACCGG GCGACCGCCGACGAG SCO5184 5638145 - 5641813 + | ATP-dependent DNA helicase SCO5185 5641824 - 5643236 + | peptidase SCO5186 5643386 - 5644342 + | hypothetical protein TERM 1781 5644361 - 5644410 + T 100 -33.7 -2.62184 | opp_overlap 5644369, overlap 5644369 5644405 CGGGCGCCGCAGACG CCACGAGAGGGGCGGCCGTCCCC GTCG GGGGAGGGCCGCCCCTCTCGTCG TGCTGTCCGGCCGGC TERM 1782 5644369 - 5644402 + T 95 -25.3 -2.84192 | opp_overlap 5644369, overlap 5644361 GCAGACGCCACGAGA GGGGCGGCCGTCCCC GTCG GGGGAGGGCCGCCCC TCTCGTCGTGCTGTC TERM 1783 5644402 - 5644369 - T 95 -25.3 -2.80443 | opp_overlap 5644369 5644361 GCAGACGCCACGAGA GGGGCGGCCGTCCCC GTCG GGGGAGGGCCGCCCC TCTCGTCGTGCTGTC SCO5187 5644671 - 5644429 - | glutaredoxin-like protein SCO5188 5644716 - 5647073 + | ATP-dependent DNA helicase SCO5189 5647169 - 5647570 + | hypothetical protein TERM 1784 5647597 - 5647550 - f 79 -15.6 -3.28712 | gap 1, opp_overlap 5647595 TTCCGTGGGCCAGAA CCCTGGAGTGATCCAGCCTGATC GTC GATCAGGCCGGCGC-CTTCAGGG CCGCGGAACCCCACC TERM 1785 5647595 - 5647627 + F 100 -22 -3.89695 | opp_overlap 5647550 AGGCCGGCGCCTTCA GGGCCGCGGAACCC CACCC GGGATCCGCGGCCC TTCTGTTTGTCCCCG SCO5190 5647747 - 5648115 + | DNA-binding protein TERM 1786 5648381 - 5648334 - g 100 -24.8 -3.21416 | GAGGCGGAGCAGGAA CGCCGGGCGCTGCGCCTGGCGA CCGC TCGCCGGATGCAGCGCCGGGCG GAGCGCGCCTCGATG SCO5191 5648112 - 5648435 + | hypothetical protein TERM 1787 5648540 - 5648485 - T 93 -21.9 -3.27022 | gap 2, overlap 5648451 5648486 CCTACGGGAGACGAA GCTCCGCTCGCGTGGGGGCCGGTCCGT CCGA ACGGACCGGCCCCCAC-CGCGCGTT-C GGCTCCGGTGGATCA TERM 1788 5648540 - 5648486 - T 89 -22.1 -2.55999 | gap 1, overlap 5648451 5648485 CTACGGGAGACGAAG CTCCGCTCGCGTGGGGGCCGGTCCGT CCGA ACGGACCGGCCCCCAC-CGCGCGTTC GGCTCCGGTGGATCA SCO5192 5649978 - 5648569 - | hypothetical protein SCO5193 5651299 - 5649971 - | secreted protein TERM 1789 5650600 - 5650626 + g 70 -16.5 -2.78463 | GAGGCCGGCCGGGAG CGGCCCGGCGC ACGAG GCGGCGGGCCG TCTCGTCCCGGCGGT SCO5194 5651506 - 5652012 + | hypothetical protein TERM 1790 5653349 - 5653322 - g 73 -2.7 -4.53419 | gap 2, overlap 5653324 CAGCAGAACAAGAAA CTGGTCCGCGTCG ACCT CGGCGCGGA--AG GCCAGCCCGTCCTCG SCO5195 5652152 - 5653906 + | hypothetical protein SCO5196 5653920 - 5654600 + | hypothetical protein SCO5197 5654618 - 5655373 + | hypothetical protein SCO5198 5655948 - 5655433 - | hypothetical protein SCO5199 5657408 - 5655945 - | hypothetical protein TERM 1791 5657289 - 5657241 - G 82 -18.9 -3.0792 | gap 2, overlap 5657231 5657229 GAACATGGCAGCGAA CGGGTTGTCC-GCGCCGG-GGCC GCCCA GGCCTCCGGCTCCGGACATCCCG AAACCGAACGGGTTG SCO5200 5657601 - 5658722 + | hypothetical protein SCO5201 5658833 - 5659291 + | moaE-like protein SCO5202 5659650 - 5660744 + | secreted protein SCO5203 5661446 - 5660775 - | hypothetical protein SCO5204 5661482 - 5664484 + | integral membrane protein TERM 1792 5664666 - 5664702 + F 95 -26.8 -2.62184 | opp_overlap 5664670, overlap 5664670 GTGTGCGAGCGACCA CGAAGGCCCGGATTCC CACAA GGAATCCGGGCCTTCG TGATGTGCGAACGCA TERM 1793 5664670 - 5664698 + F 87 -20.4 -3.24747 | opp_overlap 5664670, overlap 5664666 GCGAGCGACCACGAA GGCCCGGATTCC CACAA GGAATCCGGGCC TTCGTGATGTGCGAA TERM 1794 5664698 - 5664670 - f 93 -21.1 -3.22298 | opp_overlap 5664666 5664670 GCGAGCGACCACGAA GGCCCGGATTCCC ACA AGGAATCCGGGCC TTCGTGATGTGCGAA SCO5205 5664876 - 5666699 + | hypothetical protein TERM 1795 5666815 - 5666773 - T 100 -22.1 -3.30159 | gap 1, opp_overlap 5666775, overlap 5666777 CGAACGCGGTCAGAA TGCACCTGGGGCCGGGATCC TTGC GGATCCCGGCCCCAGGC-CT TCAGTAGCGGGGACA TERM 1796 5666775 - 5666814 + T 100 -23.6 -3.05384 | opp_overlap 5666773 5666777 AACGCGGTCAGAATG CACCTGGGGCCGGGATCC TTGC GGATCCCGGCCCCAGGCC TTCAGTAGCGGGGAC TERM 1797 5666812 - 5666777 - T 100 -30.6 -2.59431 | opp_overlap 5666775, overlap 5666773 CGCGGTCAGAATGCA CCTGGGGCCGGGATCC TTGC GGATCCCGGCCCCAGG CCTTCAGTAGCGGGG SCO5206 5667360 - 5666944 - | hydrogen peroxide sensitive repressor SCO5207 5667984 - 5667547 - | hypothetical protein SCO5208 5668887 - 5668087 - | monophosphatase SCO5209 5669080 - 5669691 + | TetR family transcriptional regulator SCO5210 5670046 - 5669723 - | molecular chaperone SCO5211 5671262 - 5670249 - | hypothetical protein SCO5212 5672591 - 5671275 - | 3-phosphoshikimate 1-carboxyvinyltransferase SCO5213 5673437 - 5672715 - | integral membrane protein SCO5214 5673488 - 5674303 + | hypothetical protein SCO5215 5674326 - 5674961 + | hypothetical protein SCO5216 5675219 - 5675902 + | RNA polymerase sigma factor RpoE SCO5217 5675899 - 5676216 + | anti-sigma factor SCO5218 5676345 - 5677670 + | integral membrane protein TERM 1798 5678495 - 5678457 - g 79 -18.9 -2.87683 | gap 2 AGATCGCCGGATACA CCCCG-GCCGGGC-ACGCG CGC CGCGTCGCCGGGCTCGGGG TGGCCGTCGGCCGGG SCO5219 5677676 - 5678932 + | lipoprotein SCO5220 5679047 - 5680027 + | hypothetical protein SCO5221 5680107 - 5680757 + | polypeptide deformylase TERM 1799 5680788 - 5680830 + F 95 -24.9 -2.87211 | overlap 5680786 5680792 CCCACATCTCCCTTG CGCACGGCGCCTGTTCGGG TCTTC CCCGAGCGGGCGCCGTTCG TCTGTGCACGCGCAT TERM 1800 5680792 - 5680826 + F 100 -22.9 -3.32022 | overlap 5680786 5680788 CATCTCCCTTGCGCA CGGCGCCTGTTCGGG TCTTC CCCGAGCGGGCGCCG TTCGTCTGTGCACGC TERM 1801 5681699 - 5681679 - g 75 -12.5 -3.6502 | opp_overlap 5681677 5681691 GACGCCGTACGGAAA CACCCGGCA TAT CGCCGGGCG GCGTTGCTGAGTCAG SCO5222 5681016 - 5682101 + | lyase TERM 1802 5682166 - 5682126 - g 72 -11.7 -3.60792 | CCGTCAACCCCGAAA CCCGCGCACCCGCGGCACC GGG AGCACCGGAGCTGCGCGAG CCGCCCGTCGCGGGC SCO5223 5682098 - 5683483 + | cytochrome P450 SCO5224 5684465 - 5683497 - | AraC family transcription regulator SCO5225 5685768 - 5684737 - | ribonucleotide-diphosphate reductase small chain SCO5226 5688143 - 5685768 - | ribonucleotide-diphosphate reductase large chain SCO5227 5688415 - 5688140 - | redoxin SCO5228 5689000 - 5688494 - | acetyltransferase TERM 1803 5689058 - 5689031 - R 100 -24.2 -3.41051 | opp_overlap 5689031 CGACGGGTACGACAA CGGGCCGCCGGA TTTC TCCGGCGGCCCG CCTCGAACCAGGGAT SCO5229 5690671 - 5689073 - | permease SCO5230 5690964 - 5690680 - | integral membrane protein SCO5231 5691836 - 5691072 - | GntR family transcriptional regulator SCO5232 5692292 - 5693569 + | sugar transporter sugar binding protein SCO5233 5693658 - 5694644 + | sugar transporter integral membrane protein SCO5234 5694641 - 5695471 + | sugar transporter integral membrane protein SCO5235 5695480 - 5696970 + | sugar hydrolase TERM 1804 5697244 - 5697213 - T 70 -14.3 -3.21099 | TGCGGGTACGACGAA GGCGCCGGGGCCC TGTGAC GGGATCCGGCGCC TTCCGCGCGCGTGGG nagB 5698076 - 5697291 - | glucosamine-6-phosphate deaminase SCO5237 5698963 - 5698211 - | oxidoreductase TERM 1805 5699097 - 5699135 + G 70 -16 -2.70932 | opp_overlap 5699082 5699077, overlap 5699119 CGGTCCGGGGCGCCT GCTCGGAGCGG-CGCGGC CAGGA GCCGCGGCCGC-CCGCGC TCCTTCGACCGGGCG SCO5238 5699058 - 5699702 + | TetR-family protein TERM 1806 5699793 - 5699771 - f 70 -2.6 -4.49316 | overlap 5699774 5699775 AGTACCAACAACAAA CAACGTCCAC CGC ATGGACACGG TTAGTGGTCTAGTCC TERM 1807 5699790 - 5699774 - f 72 -5.1 -4.34486 | overlap 5699771 5699775 ACCAACAACAAACAA CGTCCAC CGC ATGGACA CGGTTAGTGGTCTAG TERM 1808 5699975 - 5700032 + F 93 -23.6 -2.71483 | gap 3 CCACGGCCGATGTTG CTC-CGGGCTGCGGTGCC-GAGAGGG-CT GAG GGTCCCTCTCAGGCGCCGCGGCCCGCGGG TGCTTCCGGGGGTCT SCO5239 5700131 - 5701606 + | histidine kinase TERM 1809 5701732 - 5701707 - T 100 -14 -4.8622 | GCGGGCAAGCAAAAA GCCCCGGACC GGTGAA GGTCCGAGGC CAGTGCTCGTGCGAT SCO5240 5702112 - 5701855 - | hypothetical protein SCO5241 5703401 - 5702433 - | hypothetical protein SCO5242 5703529 - 5703987 + | integral membrane protein SCO5243 5705092 - 5704007 - | RNA polymerase sigma factor SCO5244 5705502 - 5705089 - | anti-sigma factor SCO5245 5706013 - 5705753 - | hypothetical protein SCO5246 5706075 - 5707667 + | Na+/H+ antiporter SCO5247 5708624 - 5707716 - | deaminase TERM 1810 5708135 - 5708151 + g 72 -13.7 -3.34344 | CCAGGGCACGGCAGC CGCGGAC GGC GTCCGCG TTGCTTCCGCCCTCG SCO5248 5709316 - 5708738 - | hypothetical protein TERM 1811 5710059 - 5710106 + G 70 -16.8 -2.70932 | opp_overlap 5710051 5710052 GAGAAGATCGGCACC GGCCCCTACGGCGACGACGCGG TGCT CGGCGTCCTCGCCGACGGCGCC TACTTCGGCGACCAG SCO5249 5709624 - 5711030 + | nucleotide-binding protein SCO5250 5711116 - 5712276 + | polyprenyl synthetase TERM 1812 5712419 - 5712457 + F 90 -21.7 -2.75481 | CGACGGCTCCGGTCC GGCGGGTCCCGCACTTC CCCAC GGTGTGCGGGGCCCGCC TCCTTGCCCTTGCCC SCO5251 5712608 - 5713246 + | acetyltransferase SCO5252 5713322 - 5713906 + | hypothetical protein SCO5253 5713933 - 5714154 + | hypothetical protein TERM 1813 5714205 - 5714164 - T 100 -21 -3.44051 | gap 1, overlap 5714165 CCCTGACCACGACAA CGCCGAAGGGGCCCGGC CAGGATGGC GCCGGGCCCCTTCGG-G CTGCCCTGCGGCCTG TERM 1814 5714205 - 5714165 - T 88 -21.2 -2.66216 | overlap 5714164 CCTGACCACGACAAC GCCGAAGGGGCCCGGC CAGGATGGC GCCGGGCCCCTTCGGG CTGCCCTGCGGCCTG SCO5254 5714657 - 5714262 - | superoxide dismutase SCO5256 5715773 - 5715144 - | hypothetical protein SCO5255 5714800 - 5715240 + | signal peptidase protein SCO5257 5715872 - 5716681 + | methyltransferase SCO5258 5717521 - 5716760 - | ATP-binding protein SCO5259 5718468 - 5717518 - | permease SCO5260 5719461 - 5718499 - | secreted protein TERM 1815 5720902 - 5720886 - g 71 -10.8 -3.71848 | CTCCTTCACCAACAA GGCCGG GCTCT CCGGCC CCCTGGAGGCGGCGC SCO5261 5720101 - 5721330 + | malate oxidoreductase TERM 1816 5721365 - 5721403 + F 90 -13.1 -4.18494 | overlap 5721370 TGATCACTGCGGTGT GGTGAGCGGTCTCGTCC CTGGT GGGCGGGGCCGCTTGTC TTTTGGGTGCCGGTG TERM 1817 5721370 - 5721398 + F 84 -13.8 -3.97622 | overlap 5721365 ACTGCGGTGTGGTGA GCGGTCTCGTCC CTGGT GGGCGGGGCCGC TTGTCTTTTGGGTGC SCO5262 5721695 - 5722660 + | dehydrogenase TERM 1818 5722677 - 5722704 + F 100 -22 -3.32022 | opp_overlap 5722677, overlap 5722670 GCGTTCCCCCAGACA CGGCGGGTCCGG TTCT CCGGGCCCGCCG TTCGTATGTCCCCGC TERM 1819 5722704 - 5722677 - f 86 -19.8 -2.87132 | opp_overlap 5722670 5722677 GCGTTCCCCCAGACA CGGCGGGTCCGG TTCT CCGGGCCCGCCG TTCGTATGTCCCCGC TERM 1820 5722743 - 5722785 + F 73 -15.7 -2.91264 | opp_overlap 5722751, overlap 5722736 5722748 ACCGCCGGCACCCAT GTCAACCAGGGTTGACAAG CGAGT CATGTCAACCTAGGTTGAC TGTATGAGTGAAGCG SCO5263 5722998 - 5723564 + | hypothetical protein SCO5264 5724715 - 5723633 - | hypothetical protein SCO5265 5725718 - 5724717 - | hypothetical protein SCO5266 5725804 - 5726637 + | membrane protei SCO5267 5727075 - 5726890 - | hypothetical protein SCO5268 5727255 - 5727725 + | hypothetical protein SCO5269 5727722 - 5729959 + | hypothetical protein TERM 1821 5729952 - 5730000 + F 72 -12.2 -3.60296 | gap 1, overlap 5729951 GCGACCTGCTGGAGG CACCGTGAC-CGCGGCCCGCGCG GGTC CGCGTGGACCGCGCGCCCTGGCG TTTCAACTCCCCCTG SCO5270 5730129 - 5731151 + | hypothetical protein SCO5271 5731309 - 5734599 + | hypothetical protein SCO5272 5734620 - 5734814 + | hypothetical protein SCO5273 5734882 - 5736744 + | hypothetical protein SCO5274 5736744 - 5738369 + | hypothetical protein TERM 1822 5739766 - 5739746 - g 84 -12.6 -4.16284 | ATACTGCTGAACAAA CTCCGGGA GACCG TCCCGGAG TCCGTCGACCTCCTG SCO5275 5738498 - 5741521 + | ATP/GTP binding protein SCO5276 5741653 - 5742078 + | hypothetical protein TERM 1823 5742312 - 5742284 - g 74 -16.7 -3.14344 | CACCCTGCCCATCAA CGCCACCGACGAC CGC GTCGTCGGCGGCT GGGACCTGGACGCGC SCO5277 5742087 - 5743016 + | magnesium chelatase SCO5278 5743022 - 5744989 + | magnesium chelatase SCO5279 5745066 - 5746304 + | hypothetical protein SCO5280 5746301 - 5749747 + | ATP-binding protein kgd 5753664 - 5749846 - | alpha-ketoglutarate decarboxylase TERM 1824 5753439 - 5753479 + g 72 -14.6 -3.40403 | gap 1 TGCCGGCGTCCGTGG GCACGGTGCCGGCGGCGGT CGGG GTCGCCGCCG-CTCCGGGC TTGTAGTCGGCGAAG SCO5282 5755076 - 5753949 - | two-component system sensor kinase SCO5283 5755807 - 5755073 - | two-component system response regulator SCO5284 5756628 - 5755921 - | hypothetical protein SCO5285 5756807 - 5759230 + | ATP-dependent protease SCO5286 5760134 - 5759307 - | secreted hydrolase SCO5287 5760383 - 5760877 + | MarR family transcriptional regulator SCO5288 5761690 - 5760899 - | hypothetical protein TERM 1825 5764296 - 5764323 + G 70 -13.4 -3.35679 | overlap 5764297 CGCGCTGGCCCCGAC CGTGCCGGTGTC CGAC GGCACCGGCACC TTCTCCCTGCCCGGC TERM 1826 5764297 - 5764322 + G 70 -16.9 -2.61264 | overlap 5764296 GCGCTGGCCCCGACC GTGCCGGTGTC CGAC GGCACCGGCAC CTTCTCCCTGCCCGG SCO5289 5762200 - 5765139 + | two component sensor kinase SCO5290 5765214 - 5765666 + | hypothetical protein TERM 1827 5765702 - 5765684 - g 71 -8.8 -4.08945 | overlap 5765695 AGCAGTCCCGGAAAA CCCGGC ACTAACG GCCGGG GCAACCTCCCCGTCC SCO5291 5765663 - 5766115 + | hypothetical protein SCO5292 5766162 - 5766737 + | ATP/GTP-binding protein SCO5293 5766796 - 5768058 + | oxygenase subunit SCO5294 5769197 - 5768022 - | secreted protein TERM 1828 5768670 - 5768727 + g 77 -12.6 -3.7732 | gap 3, overlap 5768670 5768676 CCTCTCCTGGCGCTC GG-CGA-GGGC-GGCCTGCCGGGCCAGGG CCG CGCGGGCCCGCCCGGCCAGCTCGTCGGCC TTCTTCGTGTCGCCG SCO5295 5769624 - 5769301 - | hypothetical protein SCO5296 5770348 - 5769695 - | TetR family transcriptional regulator TERM 1829 5770304 - 5770264 - G 100 -26.9 -3.01712 | GCCGGTGCGCGAAGA GGGCGAGCGCCGCGTCCAG CAA CTGGACGCGGCGCTCCTCC ACGCTGAGGCGGCGG TERM 1830 5771060 - 5771018 - R 95 -13.2 -4.59773 | overlap 5771020 CGGGAGCCCGAAAAA GGGGCAGGACTGGCCGGGCG AGG CACTCGGCCGGTCCCGCGGC GGGCTGACCACAAAG TERM 1831 5771365 - 5771324 - R 73 -14.3 -3.29947 | CATCGACCAGATCAA CGGCCGCATCCGCAGGGGC GAGA GCCTCTGCCGACTCGACCG GGCGGCCTACCGGCG SCO5299 5772464 - 5771526 - | hypothetical protein TERM 1832 5771637 - 5771676 + g 70 -14.3 -3.28712 | CTGCATGATCTCCTT GC-GGTGGCCACTGGCCCG GACC TGGGCCAG-GGCCTCCCGC TTGTCCAGGCCGACG SCO5300 5773118 - 5772612 - | hypothetical protein SCO5301 5774621 - 5773164 - | secreted penicillin-binding protein SCO5302 5775978 - 5774638 - | integral membrane cell-cycle protein SCO5303 5776522 - 5776055 - | hypothetical protein SCO5304 5777874 - 5776630 - | sensor-like histidine kinase SCO5305 5778689 - 5777871 - | lipoprotein SCO5306 5779296 - 5778817 - | protein phosphatase SCO5307 5779410 - 5780234 + | hypothetical protein SCO5308 5781207 - 5780326 - | hypothetical protein SCO5309 5781254 - 5782351 + | hypothetical protein SCO5310 5782937 - 5782374 - | hypothetical protein SCO5311 5783972 - 5783226 - | secreted protein SCO5312 5784570 - 5784136 - | hypothetical protein SCO5313 5785508 - 5784597 - | membrane protein SCO5314 5786088 - 5785753 - | whiE protein VII SCO5315 5786601 - 5786122 - | polyketide cyclase SCO5316 5786875 - 5786603 - | acyl carrier protein TERM 1833 5786902 - 5786926 + r 100 -22.9 -3.25015 | TTGTCTCGGGTTGGC CGGCCACGGGC ACC GCCCGTGGCCG TTGGTCGTCGTTCGG SCO5317 5788219 - 5786945 - | polyketide beta-ketoacyl synthase beta SCO5318 5789487 - 5788216 - | polyketide beta-ketoacyl synthase alpha SCO5319 5789957 - 5789484 - | whiE protein II SCO5320 5791297 - 5790104 - | whiE protein I TERM 1834 5791703 - 5791651 - g 71 -8.2 -3.98113 | gap 1, overlap 5791653 5791654 GAATCATGAACGAAA GAGCCGACCGGTCCGG-CGGCGCCG CCCC CGGGGGCGACCGGACCCACCGCGTC CCGGTCCTGGTCGTC SCO5321 5791641 - 5793524 + | polyketide hydroxylase SCO5322 5793601 - 5794470 + | hypothetical protein SCO5323 5795022 - 5794528 - | transcription regulator AsnC SCO5324 5795157 - 5795837 + | oxidoreductase SCO5325 5796053 - 5796373 + | hypothetical protein SCO5326 5796578 - 5796324 - | hypothetical protein TERM 1835 5796671 - 5796726 + H 79 -18.4 -2.80195 | gap 1, overlap 5796671 5796682 5796719 AAGCGCAACGAGCGA GGCCCCCGGGCTGT-TGATCGAGATGT CTG ACGTCTCAATCACGTTGCTCGGGGGCC TCGTTGGTCATGCAT SCO5327 5796736 - 5797479 + | transposase TERM 1836 5798632 - 5798577 - f 79 -18.4 -2.81256 | gap 1 ATAGATGATCAACGA GGCCCCTGAGCAGTGTGGTTGAGACGT CAG ACATCTCGATCA-ACTGCCCGGGGGCC TCGCTCGTTGCGCTT TERM 1837 5798958 - 5798942 - g 91 -3 -5.33848 | gap 1, opp_overlap 5798942, overlap 5798943 AGCAGAATGAAAAAA CTCTAGC CGAT GC-AGAG TACTTCATCGGCTCC TERM 1838 5799289 - 5799276 - g 71 -6.7 -4.15044 | TGCTGCGCGAAGAAA GTTCG ATGC CGAAC TAACTAGCGAACTCG TERM 1839 5800282 - 5800269 - g 79 -2.3 -4.87291 | TACTGCAATCAAAAA CTCCG AGTT CGCAG TCAAGAGGTTGGAAC SCO5329 5798773 - 5800470 + | hypothetical protein SCO5330 5800933 - 5801835 + | hypothetical protein SCO5331 5805600 - 5801998 - | DNA methylase TERM 1840 5802742 - 5802754 + g 71 -4.7 -4.25104 | GTGGTCGAGCAGCCA GGAGC GCA GCGCC TTTTCCTGAAGCGCG TERM 1841 5806703 - 5806692 - g 78 -7.2 -4.48299 | overlap 5806693 TTACAGGGAAATAAA GCGG AAGT CCGC ACCACCCCCGATTTC SCO5332 5805823 - 5807334 + | hypothetical protein SCO5333 5808325 - 5807420 - | hypothetical protein TERM 1842 5807935 - 5807921 - G 82 -3.4 -4.8048 | CTGCCAGATCAAAAA CCCGTC GAT GCCGAG CTTGCTGGTATAGCT TERM 1843 5808766 - 5808732 - R 79 -17.2 -3.06696 | gap 2, opp_overlap 5808762 CCGCTGGCGAAGACA GGGCGGCGGCCCCGCC GGCAA GGCGGGGC-GC-GCCC GCGCCGTGCGCGGGC TERM 1844 5808762 - 5808782 + r 70 -13.9 -3.16564 | opp_overlap 5808732 CGGCAAGGCGGGGCG CGCCCGCGC CGT GCGCGGGCC TTGATGAAGTAGGGA SCO5334 5809158 - 5808844 - | hypothetical protein SCO5335 5809171 - 5809434 + | hypothetical protein SCO5336 5809892 - 5809422 - | mutT-like protein SCO5337 5810652 - 5809921 - | hypothetical protein SCO5338 5810810 - 5811163 + | regulatory protein SCO5339 5811167 - 5812522 + | plasmid transfer protein TERM 1845 5812636 - 5812580 - g 86 -20.7 -3.02144 | overlap 5812583 CCACCCGCCGCAAGA TCACGCCCCCGGCGCCGGAGCCCGCGC TGT GCCCGGACTGCGACGGCAAGGGCGAGA CCCGCGAAACCGTCC TERM 1846 5812633 - 5812583 - g 84 -21 -2.73875 | overlap 5812580 CCCGCCGCAAGATCA CGCCCCCGGCGCCGGAGCCCGCGC TGT GCCCGGACTGCGACGGCAAGGGCG AGACCCGCGAAACCG SCO5340 5812543 - 5812740 + | hypothetical protein SCO5341 5812762 - 5813430 + | SpdA2 protein SCO5342 5813452 - 5813643 + | SpdB2 protein SCO5343 5813654 - 5813809 + | SpdC2 protein SCO5344 5813822 - 5814145 + | SpdD2 protein SCO5345 5814235 - 5814786 + | hypothetical protein TERM 1847 5814788 - 5814837 + F 73 -13.5 -3.33696 | gap 2, opp_overlap 5814820 GCCTCTCTCGCTGAC CGGCCGCCGGGTGGCGCACAAGC CGCCAA GCACGC-CGCCACCCGG-GGCCG TTCCTTCCAACCGCA SCO5346 5814872 - 5815057 + | hypothetical protein SCO5347 5815050 - 5816414 + | replication initiation protein SCO5348 5816416 - 5816601 + | excisionase SCO5349 5816598 - 5817971 + | integrase TERM 1848 5817990 - 5818015 + F 76 -16.1 -3.17797 | GTACGTGAGCCCTTA GCCCCCAGCCC GCAT GGACTGGGGGC TTCGCTATATCTCGG SCO5350 5818003 - 5818548 + | hypothetical protein TERM 1849 5818668 - 5818703 + F 85 -16.8 -3.54741 | opp_overlap 5818662 5818670 CTGCACATACGCGAA GACCCCGGCCTCAGCG TTTC CGCTGGTGACGGGGTC TTTGGACACCTCATG TERM 1850 5818960 - 5818937 - f 77 -11 -4.11484 | gap 1, opp_overlap 5818949, overlap 5818938 CGGAAGTCGGGAAAA CCCGGACGCGG TGG CCG-GTCCGGA CCTACTCTCGAGTTG SCO5351 5818975 - 5819478 + | regulatory protein SCO5352 5819600 - 5820643 + | arginyl tRNA synthetase SCO5353 5820662 - 5822053 + | diaminopimelate decarboxylase TERM 1851 5822175 - 5822125 - f 88 -9.7 -4.69048 | overlap 5822126 AGAAAATGAAATAAA CGTCTCACGATCCGGACGAAA GGCAGAAAA TCCCGTCCGGTGCGTGAGACT GGTCCAACCGTAGAC TERM 1852 5822174 - 5822126 - f 70 -13.2 -3.38988 | overlap 5822125 GAAAATGAAATAAAC GTCTCACGATCCGGACGAAA GGCAGAAAA TCCCGTCCGGTGCGTGAGAC TGGTCCAACCGTAGA TERM 1853 5822301 - 5822271 - g 71 -13.2 -3.53091 | AGTGGTCGGCTCAAA GGTGGCGCGCATCA TGA CGACGCACGCCGCC GACCTCGCCGCCCGG TERM 1854 5823312 - 5823295 - g 73 -10.5 -3.86015 | opp_overlap 5823296 GACGTGGCCGACAAA CCGGGCG TGCT CGCCCAG GTCGCGACCGTGTTC SCO5354 5822215 - 5823504 + | homoserine dehydrogenase SCO5355 5823511 - 5824569 + | threonine synthase TERM 1855 5824642 - 5824689 + F 90 -22.1 -2.87132 | opp_overlap 5824665 AAAGTCACTGACGGG GGGTGCACAGGGGGCTTACGA CACGCA TCGTGCGCCTCCTGTGCGCCC TATGTCGCCACAGAA TERM 1856 5825369 - 5825383 + G 78 -7.8 -4.25104 | TGGAGCCCTCCGATT CCATCG TTC CGGTGG TTTTCGTGCCCGGAA SCO5356 5824855 - 5825784 + | homoserine kinase TERM 1857 5825983 - 5826014 + F 75 -14.4 -3.53444 | gap 1, overlap 5825983 ACGGGCATTGAGCGG C-CCACCGGTGGGGG TTA CCCCCACTGGGGGAG TTTCGGAACCGGTGC TERM 1858 5826473 - 5826435 - g 70 -16.7 -2.78547 | overlap 5826432 CGAGGTCATCAAGGA GGCGCAGGCCGCGG-GGGG AGC CCCCGCCAAGGCC-GCGCC CGCCGCCGCGGACAC TERM 1859 5826624 - 5826600 - g 72 -14.2 -3.34947 | overlap 5826591 5826615 CAAGAAGGCGGACAA GGCGGCCGCC GACAA GGCCGCCGCC CAGCAGCAGATCGAG rho 5826214 - 5828298 + | transcription termination factor Rho TERM 1860 5828318 - 5828346 + F 100 -25.3 -3.21099 | opp_overlap 5828268, overlap 5828305 5828314 CCGCCGCGCACCGCA GGGGCCGCCTCCG TTT CGGGGGCGGCCCC TTCGTCATGGGCGCC TERM 1861 5829103 - 5829070 - g 73 -10.9 -3.9461 | gap 1, overlap 5829071 CGGCGGCAACAAGAA GCTGGGCGGCGGCACC GAC GACGGCACCGCCC-GC TCGGACACGGCGATG SCO5358 5828747 - 5829895 + | hypothetical protein rpmE 5830020 - 5830244 + | 50S ribosomal protein L31 TERM 1862 5830257 - 5830304 + F 100 -22.2 -4.72272 | gap 3, opp_overlap 5830244 TAGCGAGCCTCCAAC CGCCGGTCCACGGCCGCATCCCC TCCCC GGGGA-GC-GCCG-GGACCGGCG TTTTTGGTCGCCCGA prfA 5830353 - 5831429 + | peptide chain release factor 1 SCO5361 5831498 - 5832343 + | methylase SCO5362 5832394 - 5833041 + | hypothetical protein SCO5363 5833218 - 5833718 + | hypothetical protein SCO5364 5833806 - 5835062 + | serine hydroxymethyltransferase SCO5365 5835206 - 5836510 + | transferase TERM 1863 5837195 - 5837180 - g 71 -7.5 -4.09864 | overlap 5837170 5837189 ACCGACGGGCGAAAA GCCCG AAAAGA CGGGC CACTCGTCGTGAGGG SCO5366 5836773 - 5837207 + | ATP synthase protein I SCO5367 5837433 - 5838254 + | F0F1 ATP synthase subunit A SCO5368 5838330 - 5838560 + | ATP synthase C chain TERM 1864 5838878 - 5838835 - g 79 -16.1 -3.44051 | gap 3 CCTCGAGCAGTACAA GGCGCAGCTCGCCGAGGCC-CG GCA CGAGGCCGCG-CGA-CTGCGCC AGGAGGCGCAGGAGC SCO5369 5838602 - 5839156 + | F0F1 ATP synthase subunit B SCO5370 5839153 - 5839977 + | F0F1 ATP synthase subunit delta SCO5371 5840171 - 5841760 + | F0F1 ATP synthase subunit alpha SCO5372 5841782 - 5842699 + | F0F1 ATP synthase subunit gamma SCO5373 5842699 - 5844135 + | F0F1 ATP synthase subunit beta TERM 1865 5844248 - 5844227 - f 70 -13 -3.35371 | TAGACTTGTAACCAA CACCCGGC TCTCCC GCCGGGTG GTGACCCGAGGAGCC SCO5374 5844267 - 5844641 + | F0F1 ATP synthase subunit epsilon TERM 1866 5844704 - 5844740 + F 88 -5 -5.16572 | gap 1 GGCTGGGACCGGAGC CATCCGGACCCGGCCGC GGCT GAGGCAGA-TCCGGGTG TTTTTTCCGTTCCGT SCO5375 5844778 - 5845233 + | secreted protein SCO5376 5847081 - 5845252 - | chitinase C (secreted protein) TERM 1867 5846387 - 5846438 + g 74 -17.2 -2.78935 | gap 1, overlap 5846432 GTGCCGGGGTTGCCG CCGTCCCCGCCGCCGGTGGTGGTGA CCT TCACCG-CGCCGCTGGCCGGGCCGG TCTGGTCGGCGGTGT TERM 1868 5847047 - 5847063 + g 71 -7.2 -4.12532 | overlap 5847040 GGAAGCGCCAGGGTC GCTGCG AGTGC CGCGGC TTTGTGTCTGAAGCG SCO5377 5847870 - 5847229 - | chitinase two-component response regulator SCO5378 5849063 - 5847867 - | chitinase two-component sensor kinase TERM 1869 5849764 - 5849740 - g 72 -11.4 -3.61715 | gap 1 GATCTGGCCGAAGAA GGCCCC-GGCG GGGA CGCCTGAGGCC GCTGCCGAGCGGCGG SCO5379 5849216 - 5849800 + | hypothetical protein SCO5380 5849797 - 5849985 + | hypothetical protein SCO5381 5850686 - 5850114 - | hypothetical protein SCO5382 5851449 - 5850700 - | ABC transporter, integral membrane subunit SCO5383 5852252 - 5851470 - | ABC transporter, ATP-binding subunit SCO5384 5852346 - 5852987 + | TetR family transcriptional regulator SCO5385 5853124 - 5853972 + | 3-hydroxybutyryl-CoA dehydrogenase SCO5386 5854163 - 5854486 + | anti-sigma factor antagonist SCO5387 5854720 - 5857344 + | hypothetical protein TERM 1870 5857401 - 5857373 - T 95 -23.9 -2.83715 | GGCATCAGCACGAGA GGGCCGGGTCCGC CGC ACGGACCCGGCCC TCCTCGCGTCGTACG SCO5388 5858200 - 5857445 - | hypothetical protein SCO5389 5858397 - 5858789 + | hypothetical protein SCO5390 5859896 - 5858868 - | alkanal monooxygenase (luciferase) SCO5391 5860153 - 5860485 + | ATP/GTP-binding protein, doubtful CDS SCO5392 5861363 - 5860494 - | ABC transporter integral membrane subunit SCO5393 5862631 - 5861360 - | ABC transporter ATP-binding subunit SCO5394 5863556 - 5862780 - | ABC transporter integral membrane subunit SCO5395 5864593 - 5863553 - | ABC transporter ATP-binding subunit TERM 1871 5864606 - 5864562 - G 86 -19.4 -3.34043 | gap 1, opp_overlap 5864562 5864563, overlap 5864563 5864594 GCGACCACGCTAGAA CGGGACGAGGCCCGCTGCCAC CCCA GTGACAACAGGCCTCG-CCCA TGTTCGTACGGATTC TERM 1872 5864605 - 5864563 - G 83 -20.7 -2.60212 | gap 1, opp_overlap 5864563 5864562, overlap 5864562 5864594 CGACCACGCTAGAAC GGGACGAGGCCCGCTGCCAC CCCA GTGACAACAGGCCTCG-CCC ATGTTCGTACGGATT SCO5396 5865601 - 5864669 - | cellulose-binding protein SCO5397 5869789 - 5865809 - | large Ala/Glu-rich protein TERM 1873 5866343 - 5866388 + g 70 -13.9 -3.28924 | gap 1 CCTTATGGCGGTCGC GTCCCG-GCGGGCGCCGACCAG CAG CTCGTCCGCGTCCGTACGGGCC TTCTCCACCCGGGTG TERM 1874 5869858 - 5869834 - R 72 -15.7 -2.71263 | opp_overlap 5869823, overlap 5869822 5869821 AATCTTCCCGAACGA GCTCCGTCCGT CCG ACGGACGGGGC CCCCGGGGAATGGTG SCO5398 5870463 - 5870023 - | hypothetical protein SCO5399 5870613 - 5871818 + | acetyl-CoA acetyltransferase SCO5400 5871855 - 5872811 + | transport system kinase SCO5402 5875173 - 5874400 - | Asp-rich hydrophilic protein (putative membrane protein) SCO5401 5873153 - 5874457 + | integral membrane protein SCO5403 5875298 - 5875966 + | two-component system response regulator SCO5404 5875963 - 5877399 + | two-component sensor kinase SCO5405 5877884 - 5877408 - | transcriptional regulator SCO5406 5878762 - 5877986 - | hypothetical protein SCO5407 5879418 - 5878759 - | hypothetical protein SCO5408 5880130 - 5879411 - | hypothetical protein SCO5409 5880228 - 5880572 + | hypothetical protein TERM 1875 5880701 - 5880661 - T 100 -26.9 -3.59979 | opp_overlap 5880695, overlap 5880686 GGTCCGCACGTGAAA GGCCCCGTCCGAGCACCTC GGA GAAGCGCGCGGACGGGGCC GGGCGCCGACTCGCC SCO5410 5881012 - 5880887 - | hypothetical protein TERM 1876 5881053 - 5881018 - R 70 -12.5 -3.40403 | TTGCCCGCACGAGAA CGGCCCGCCACCGGA TCGGGG CCCGACAACGGGCCG CGGGTGGTACTCGGG SCO5411 5882480 - 5881074 - | integrase/recombinase SCO5412 5882513 - 5882656 + | hypothetical protein SCO5413 5882733 - 5883242 + | MarR-transcriptional regulator SCO5414 5883333 - 5883662 + | hypothetical protein SCO5415 5883756 - 5885456 + | isobutyryl-CoA mutase A SCO5416 5886499 - 5885486 - | transcriptional regulator SCO5417 5886533 - 5887552 + | zinc-binding oxidoreductase SCO5418 5888283 - 5887579 - | transcriptional regulator TERM 1877 5888421 - 5888404 - H 79 -14.1 -3.65351 | CGACTCGTAGCGAAA GCGCGGG TCCG CCCGCGC CCCAGCGACGACCAC TERM 1878 5889258 - 5889244 - g 74 -11.4 -3.78067 | opp_overlap 5889244 AACACGGAAGCCAAA CTGGGC CTC GCCCAG GCCGAGTTGCTCCAG SCO5419 5888587 - 5889543 + | thioredoxin TERM 1879 5889678 - 5889622 - f 85 -19.6 -3.0263 | opp_overlap 5889629 5889631 AGGAGCTGTCGAAGA GGC-GTCACTGCGGCCGCGCTTTACCAA AAC TTGGTAAT-CGCGGCCGCTGTTACTGCC AGTAAGTCGGCGGCG TERM 1880 5889629 - 5889670 + F 82 -18.1 -3.15663 | gap 1, opp_overlap 5889622, overlap 5889631 GTCGAAGAGGCGTCA CTGCGGCCGCGCTTTACCAA AAC TTGGTAAT-CGCGGCCGCTG TTACTGCCAGTAAGT TERM 1881 5889631 - 5889668 + F 86 -19.3 -3.14051 | gap 1, opp_overlap 5889622, overlap 5889629 CGAAGAGGCGTCACT GCGGCCGCGCTTTACCAA AAC TTGGTAAT-CGCGGCCGC TGTTACTGCCAGTAA SCO5420 5890196 - 5890843 + | cholesterol esterase TERM 1882 5890851 - 5890887 + F 95 -24.5 -2.70932 | GCTACTGAGCCCTCG CTGACGGGCGGGGGC CGGTTGC GCCCCCGCCCGTCGG TCCTTCGGCCGCCCC SCO5421 5890960 - 5891517 + | integral membrane protein SCO5422 5891522 - 5892892 + | hypothetical protein TERM 1883 5892953 - 5892914 - T 100 -25.8 -3.35679 | gap 1, overlap 5892915 GGTCGCGAGCCACAA CCGCCGAGGGCGCCCCCTG CGA CAGGGGG-GCCCTCGGCGC GTACGACGGGGAGGG TERM 1884 5892952 - 5892915 - T 100 -29.3 -2.61264 | gap 1, overlap 5892914 GTCGCGAGCCACAAC CGCCGAGGGCGCCCCCTG CGA CAGGGGG-GCCCTCGGCG CGTACGACGGGGAGG SCO5423 5894405 - 5892975 - | pyruvate kinase TERM 1885 5894481 - 5894466 - R 83 -6 -4.89567 | overlap 5894468 GCGGAAAATACAAAA GGGCGG GATG CCGCTC AGGTGAGATCGGGAT SCO5424 5895703 - 5894480 - | acetate kinase SCO5425 5897793 - 5895700 - | phosphate acetyltransferase SCO5426 5897944 - 5898969 + | 6-phosphofructokinase SCO5427 5899692 - 5898979 - | hypothetical protein SCO5428 5900694 - 5899804 - | integral membrane transport protein SCO5429 5901637 - 5900696 - | integral membrane transport protein SCO5430 5903010 - 5901634 - | extracellular solute-binding lipoprotein SCO5431 5904399 - 5903536 - | secreted nucleosidase TERM 1886 5904842 - 5904853 + G 71 -3.6 -4.42386 | overlap 5904838 GCGCGGTACCCCTGG CGGC GCTG GTCG TTTTCTGGGTGAACG SCO5432 5904427 - 5904966 + | integral membrane protein SCO5434 5908036 - 5907344 - | two-component response regulator SCO5433 5905174 - 5907459 + | AfsR-like regulator SCO5435 5909691 - 5908033 - | two-component sensor kinase SCO5436 5909846 - 5911246 + | sodium:dicarboxylate symporter TERM 1887 5911341 - 5911371 + F 87 -19.8 -3.18274 | opp_overlap 5911344, overlap 5911344 GCCCGGCCCCCCGAA GAAGCCCCGCGC ACCCCCC GCGCGGGGCTTC TTGCCTTGACGTCCG TERM 1888 5911344 - 5911368 + F 90 -15.7 -3.73336 | opp_overlap 5911344, overlap 5911341 CGGCCCCCCGAAGAA GCCCCGCGC ACCCCCC GCGCGGGGC TTCTTGCCTTGACGT TERM 1889 5911368 - 5911344 - f 87 -16.4 -3.61398 | opp_overlap 5911344 5911341 CGGCCCCCCGAAGAA GCCCCGCGCA CCCCC CGCGCGGGGC TTCTTGCCTTGACGT TERM 1890 5911374 - 5911395 + F 73 -14.5 -3.20723 | CGCGCGGGGCTTCTT GCCTTGACG TCCG CGTCAAGGC TTACGTTCGTCCCCA SCO5437 5911410 - 5911808 + | MerR family transcriptional regulator SCO5438 5911820 - 5912134 + | thioredoxin TERM 1891 5912160 - 5912206 + F 87 -20.4 -3.20896 | gap 1, opp_overlap 5912171, overlap 5912171 GCGCGGACTGGCCGG CGCAGAAAAAATCCCCCGAGC AATTGC GCTCGGGGGATTTCT-CTGCG TATATTCGTTGATTC TERM 1892 5912171 - 5912196 + F 90 -16.2 -4.0827 | opp_overlap 5912171, overlap 5912160 CCGGCGCAGAAAAAA TCCCCCGAGC AATTGC GCTCGGGGGA TTTCTCTGCGTATAT TERM 1893 5912196 - 5912171 - f 100 -16.9 -5.24129 | opp_overlap 5912171 5912160 CCGGCGCAGAAAAAA TCCCCCGAGCA ATTG CGCTCGGGGGA TTTCTCTGCGTATAT SCO5439 5912270 - 5914537 + | hypothetical protein SCO5440 5916919 - 5914595 - | glycogen branching enzyme SCO5441 5918354 - 5916960 - | hypothetical protein SCO5442 5920075 - 5918375 - | trehalose synthase SCO5443 5922099 - 5920072 - | alpha-amylase SCO5444 5922464 - 5925088 + | glycogen phosphorylase SCO5445 5925698 - 5925132 - | hypothetical protein TERM 1894 5925655 - 5925694 + g 76 -18.6 -2.64616 | gap 1, opp_overlap 5925651, overlap 5925658 ATGGGCACCAAGGGT AGGGCGGCACCCGGGAACC GCT GGTTC-CGGGTGCCGCCGG TCATGTCGGTCGCGG SCO5446 5927360 - 5925711 - | hypothetical protein TERM 1895 5927612 - 5927652 + r 100 -32.7 -2.53382 | CGGCGGACATGGAGA GGGCGCCGCTCCGGAGGAT TCG AACCTCCGGAGCGGCGCCC TGACTTGGGGGTGGT SCO5447 5929742 - 5927688 - | neutral zinc metalloprotease SCO5448 5931785 - 5930034 - | ABC transporter SCO5449 5933599 - 5931782 - | ABC transporter TERM 1896 5932171 - 5932199 + g 73 -10.1 -3.92373 | overlap 5932158 5932190 GGCCGTCCGGGAGGG CGCGGACGATGTC TTC GGCGGCGGCCGCG TTTATGGCTGCGGTG SCO5450 5935479 - 5933596 - | ABC transporter SCO5451 5937458 - 5935476 - | ABC transporter SCO5452 5937594 - 5938532 + | ABC transporter, ATP-binding subunit SCO5453 5938529 - 5939278 + | integral membrane protein SCO5454 5939275 - 5940603 + | two-component system sensor kinase SCO5455 5940593 - 5941267 + | two-component system response regulator SCO5456 5943667 - 5941319 - | glycosyl hydrolase (secreted protein) TERM 1897 5943933 - 5943892 - g 72 -14.3 -3.33815 | ATGTTCGGCAAGCAA CCCGCCGCCGAGGACGTCA TCCG CGTCACCCCCGACGACGGG AGCAAGGCCGTCCGG SCO5457 5943733 - 5944983 + | lipoprotein SCO5458 5945149 - 5946351 + | lipoprotein SCO5459 5946399 - 5947166 + | enoyl-CoA hydratase SCO5460 5947312 - 5947974 + | AbaA-like regulatory protein SCO5461 5948080 - 5948694 + | secreted protein SCO5462 5949349 - 5948711 - | hypothetical protein SCO5463 5949398 - 5950312 + | MerR family transcriptional regulator SCO5464 5950361 - 5950573 + | hypothetical protein TERM 1898 5950627 - 5950574 - f 89 -22.4 -2.66106 | overlap 5950570 5950571 CACCTGAACAAGTGA CGGCACGGTG-CGGGGCGCCCGGCGG TCAC CCGGCGGGCGCCCCTTCGCCGT-CCG GGCACGTTGCTGCGG SCO5465 5950745 - 5951407 + | hypothetical protein SCO5466 5951973 - 5951416 - | hydrolase TERM 1899 5951920 - 5951882 - G 77 -16.1 -3.18264 | gap 1, opp_overlap 5951878 GGGTTGACGTACGAA CGGCC-CTCCGTCGCCTT CACG AAGACGAAGGAGAGGCCG TCCGTGTCGTAGTTG SCO5467 5952154 - 5952888 + | muramoyl-pentapeptide carboxypeptidase SCO5468 5954361 - 5952943 - | transmembrane transport protein SCO5469 5955845 - 5954478 - | L-serine dehydratase TERM 1900 5954976 - 5955018 + g 81 -16.9 -3.47227 | gap 1, overlap 5954972 GGGGATGATGCCGGC CGCG-CCGTTGGTCGGGGCG GTGA CGACCCGGCCGCCGGCCGCG TTCTCCTCGTTCACG TERM 1901 5955411 - 5955353 - G 89 -20.2 -3.28712 | opp_overlap 5955402 CGGTGTCGTCCAGAA CTATGCGGTCGGCGCCGACCGCGTCCTC GTC GACGACGAAGCCGCCGCCGACCGAGTAG TAGGTCTTGGTCAGC TERM 1902 5955884 - 5955940 + r 100 -27.4 -2.74182 | gap 2, overlap 5955885 5955922 5955924 5955926 GTGCAGAGGGTGGGG CA-CTCCGGGTGGGGCGACG-GGCCGCT TGT GGCGGACGCGGCGCCCCACCCGGAGGTG TGGTGTCTACTTGTT TERM 1903 5955885 - 5955938 + r 95 -26.7 -2.90685 | gap 1, overlap 5955884 5955922 5955924 5955926 TGCAGAGGGTGGGGC ACTCCGGGTGGGGCGACG-GGCCGCT TGT GGCGGACGCGGCGCCCCACCCGGAGG TGTGGTGTCTACTTG SCO5470 5957209 - 5955947 - | serine hydroxymethyltransferase SCO5471 5957601 - 5957224 - | glycine cleavage system H protein gcvT 5958846 - 5957728 - | glycine cleavage system aminomethyltransferase T TERM 1904 5958964 - 5958988 + H 80 -9.3 -4.1721 | gap 1, overlap 5958964 GCTTGCACCTTGGGT G-GGACCGCC GTCGGG GGCGGTCCGC TTTTCAGATGTGCCT TERM 1905 5959207 - 5959195 - H 73 -6.9 -4.45664 | overlap 5959196 GTAAGCGAACGAAAA CGCGA GAC CCGCG CATTACCTTCTCTTT SCO5473 5959273 - 5959941 + | ATP/GTP binding protein SCO5474 5960021 - 5960788 + | hypothetical protein TERM 1906 5961507 - 5961453 - g 88 -18.5 -3.48276 | gap 2 CCTGCTCGCACAGAA CGCCCACCGCACCCCGGCGGTCCGCGC GCT GCGCCG-C-GCCTGGGTGCAGCCGGCG CTCGGAGCGCCGTAC SCO5475 5960983 - 5961780 + | hypothetical protein SCO5476 5962095 - 5963102 + | oligopeptide transport integral membrane protein SCO5477 5963174 - 5964976 + | oligopeptide-binding lipoprotein SCO5478 5965085 - 5966083 + | oligopeptide transport system integral membrane protein SCO5479 5966080 - 5967177 + | oligopeptide ABC transporter ATP-binding protein TERM 1907 5967287 - 5967238 - g 73 -18 -2.64735 | gap 3, overlap 5967266 ACGGCACCGAGAGCA CGTC-CGCCGG-GGCCGCCACCCTC ACC AAGGGT-GCGGCCCCCGGCGAGACC CTGCTCAAGGTGACC SCO5480 5967174 - 5968664 + | oligopeptide ABC transporter ATP-binding protein TERM 1908 5968687 - 5968719 + F 85 -17.1 -3.55444 | CACTAGGCCCGCCCG GAGCTCCCGCCTT TGTTTGT AAGGCGGGGGCTC TTTGGCAGGTAAGAA SCO5481 5968742 - 5969401 + | integral membrane protein SCO5482 5969537 - 5970559 + | hypothetical protein SCO5483 5971214 - 5970588 - | transcriptional regulator TERM 1909 5971311 - 5971276 - H 71 -6.2 -4.2349 | overlap 5971277 GCGCTAGACTGAAAA GTCAGTGAACAACTGT AACC ACAACCGTTCACCGAA GCGTCCACGCAAGGT SCO5484 5971342 - 5971509 + | small hydrophobic membrane protein SCO5485 5971544 - 5971837 + | small hydrophobic membrane protein SCO5486 5971928 - 5973097 + | pyridoxal-phosphate-dependent aminotransferase SCO5487 5973862 - 5973134 - | hypothetical protein SCO5489 5975874 - 5974936 - | hypothetical protein trmU 5973924 - 5975054 + | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase SCO5490 5976259 - 5975918 - | hypothetical protein SCO5491 5976342 - 5976890 + | hypothetical protein SCO5492 5976909 - 5977607 + | short chain dehydrogenase SCO5493 5977775 - 5978770 + | hypothetical protein ligA 5978785 - 5980992 + | NAD-dependent DNA ligase LigA TERM 1910 5981143 - 5981170 + F 70 -13.4 -3.34398 | gap 1, overlap 5981141 TGCGGTCGGGGCACC CCCCTGCCCCCAG TGA CAGGGGG-AGGGG TCTTTGACGCGGAGC SCO5495 5981250 - 5983490 + | phosphodiesterase TERM 1911 5983563 - 5983510 - f 72 -16 -2.83894 | gap 3, overlap 5983513 ACCACCACGACCACA CCACGCGACCC-GGCCCG-CCCGC-CG CGG CGAGCGGGGCAGGCCTGGGCCGGGCAG GGTGAGCCGGGCGTC TERM 1912 5983560 - 5983513 - f 71 -16.3 -2.67694 | gap 3, overlap 5983510 ACCACGACCACACCA CGCGACCC-GGCCCG-CCCGC-CG CGG CGAGCGGGGCAGGCCTGGGCCGGG CAGGGTGAGCCGGGC SCO5496 5983774 - 5984145 + | small membrane hydrophobic protein SCO5497 5984177 - 5984671 + | hypothetical protein gatC 5984816 - 5985112 + | aspartyl/glutamyl-tRNA amidotransferase subunit C gatA 5985116 - 5986609 + | aspartyl/glutamyl-tRNA amidotransferase subunit A SCO5500 5986606 - 5986845 + | hypothetical protein gatB 5986861 - 5988375 + | aspartyl/glutamyl-tRNA amidotransferase subunit B TERM 1913 5988388 - 5988438 + F 100 -29.9 -3.35679 | gap 1, opp_overlap 5988391, overlap 5988390 5988391 TGACACCCGCACACG CAA-GGCCCTGGGGGGACGCGCCG AGCA CGGCGGGTTCCCCCAGGGCCGTTG TTGTGAATAAGGACA TERM 1914 5988390 - 5988435 + F 100 -28.3 -3.8211 | opp_overlap 5988391, overlap 5988388 5988391 ACACCCGCACACGCA AGGCCCTGGGGGGACGCGCCG AGCA CGGCGGGTTCCCCCAGGGCCG TTGTTGTGAATAAGG TERM 1915 5988434 - 5988391 - f 100 -29.6 -3.12668 | opp_overlap 5988391 5988390 5988388 CACCCGCACACGCAA GGCCCTGGGGGGACGCGCCG AGCA CGGCGGGTTCCCCCAGGGCC GTTGTTGTGAATAAG TERM 1916 5988391 - 5988434 + F 100 -31.8 -2.88945 | opp_overlap 5988391, overlap 5988390 5988388 CACCCGCACACGCAA GGCCCTGGGGGGACGCGCCG AGCA CGGCGGGTTCCCCCAGGGCC GTTGTTGTGAATAAG SCO5502 5988617 - 5990863 + | integral membrane export protein SCO5503 5990841 - 5991425 + | acetyltransferase SCO5504 5991461 - 5992087 + | integral membrane protein SCO5505 5992283 - 5992468 + | hypothetical protein TERM 1917 5992476 - 5992513 + G 82 -20.5 -2.70932 | CCGCGTGAACGGGGG AGCCGGGGAGGGGGGCC GCAC GGCCTCCCTCCCCGCCG TCGTTCCCGCCGCCG TERM 1918 5994868 - 5994814 - g 79 -14.2 -3.64703 | gap 2 GGCGCCGCACTCAAA CGCGCCGT-CGTCGCCCTC-GCCCGC GGCGA GCGGGCCGAGGCCGCCGGACTGCTCG CCGAGGCCCGCGCCG SCO5506 5992465 - 5995740 + | regulatory protein SCO5507 5995778 - 5995987 + | hypothetical protein SCO5508 5997339 - 5995996 - | oxidoreductase SCO5509 5998268 - 5997336 - | oxidoreductase SCO5510 5998409 - 5999350 + | dehydrogenase TERM 1919 6000021 - 6000037 + G 74 -13.7 -3.53444 | GCTTCCTCTACGCCC GCGGACG CCG CGTCCGC TTTCGGCCGGCCTGG SCO5511 5999549 - 6002875 + | membrane associated phophodiesterase TERM 1920 6003004 - 6003031 + F 100 -8.5 -5.4505 | gap 2 CCACACCGACGCGCT CCCCTCGCTTGCC TTAC GGCA--CGAGGGG TTTTTTGTTGCACAG SCO5512 6003117 - 6004958 + | acetolactate synthase 1 catalytic subunit ilvH 6004980 - 6005504 + | acetolactate synthase 3 regulatory subunit TERM 1921 6005570 - 6005529 - f 90 -21.7 -2.82623 | gap 1, overlap 6005535 CGGTCCGCACAACGA CGGAA-ACGGGCGGCCGG GACACCG CCGGCCGCCCGCATTCCG AGACCCCGAAACTTC TERM 1922 6005563 - 6005535 - f 100 -20.3 -3.72984 | overlap 6005529 GCACAACGACGGAAA CGGGCGGCCGG GACACCG CCGGCCGCCCG CATTCCGAGACCCCG SCO5514 6005643 - 6006641 + | ketol-acid reductoisomerase SCO5515 6006860 - 6008449 + | D-3-phosphoglycerate dehydrogenase TERM 1923 6008520 - 6008554 + T 100 -23.7 -4.18018 | GACCTCGTCCTCAGA CGCCGGACGGGCTGA GCGAG TCAGCCTGTCCGGCG TTTTCCGTGGCCGCG SCO5516 6010080 - 6008515 - | integral membrane efflux protein SCO5517 6010146 - 6010736 + | transcriptional regulator SCO5518 6011964 - 6010717 - | transcriptional regulator SCO5519 6012130 - 6013056 + | hypothetical protein SCO5520 6013103 - 6014743 + | delta-1-pyrroline-5-carboxylate dehydrogenase TERM 1924 6014761 - 6014798 + F 100 -34.3 -4.57569 | CCCGCGCGCGAATCG CCCGGCGGGGCCAGGTC GACC GACCTGGCCCCGCCGGG TTTTTCCGCAGGTCG SCO5521 6015052 - 6015183 + | hypothetical protein TERM 1925 6015198 - 6015224 + F 79 -18 -2.79796 | AGCCGCGCGGACGAC CGAGGCGTCCGC ATG GCGGACACCTCG TGTCATCCCGTGGGA SCO5522 6015259 - 6016302 + | 3-isopropylmalate dehydrogenase TERM 1926 6016338 - 6016370 + F 73 -9.8 -3.97947 | gap 1, opp_overlap 6016358 6016359 CGAAACCCTTTCGAA GCCGCCGGGCCGC AAAACAAG GCA-CCCGGCGGC TTTCTCCTGCGTCCG SCO5523 6016567 - 6017655 + | branched-chain amino acid aminotransferase SCO5524 6019159 - 6017729 - | transmembrane transport protein SCO5525 6019304 - 6019987 + | bifunctional urease subunit gamma/beta TERM 1927 6021234 - 6021259 + G 70 -16.2 -2.62184 | CGAGGTCGGCTCCAT CGAGGTCGGC AAGCTC GCCGACCTCG TGCTGTGGCGCCCGG ureC 6019984 - 6021660 + | urease subunit alpha SCO5527 6021711 - 6022730 + | hypothetical protein TERM 1928 6023138 - 6023095 - g 88 -18.9 -3.5361 | gap 1 GAACCACTCACAGAA CGCCCCCGACGA-GGCCCGC GACCG GCAGGCCGCCATCGAGGGCG CCTGGCACCGCGACC SCO5528 6022748 - 6023350 + | transcriptional regulator TERM 1929 6023536 - 6023555 + F 100 -11.4 -4.82855 | CGACCCGCGCGCAGA CCTCTCGC ACCC GCGAGGGG TTTTTCGCTTTCCTG SCO5529 6023669 - 6025273 + | alpha-isopropylmalate/homocitrate synthase family transferase SCO5530 6025338 - 6026690 + | hypothetical protein SCO5531 6027712 - 6026708 - | integral membrane protein TERM 1930 6027846 - 6027879 + G 70 -13.7 -3.21276 | opp_overlap 6027821 6027822, overlap 6027865 GTACGGATGACGCCC GGCGCGCGGCGGGTG CTGG CAGCCGCCGAGCGGC TGTTCTACGAGCACG TERM 1931 6027865 - 6027881 + G 70 -13.7 -3.28712 | overlap 6027846 CGCGGCGGGTGCTGG CAGCCGC CGA GCGGCTG TTCTACGAGCACGGC SCO5532 6027804 - 6028388 + | transcriptional regulator SCO5533 6029031 - 6028474 - | hypothetical protein TERM 1932 6030543 - 6030517 - g 72 -13.6 -3.33261 | CGGCAACGGCGAGAA CCCGCGCGGCTG GCA CACCGGCGCGGG CATGCTCACCTGGTG SCO5534 6029180 - 6031510 + | secreted lyase SCO5535 6031665 - 6033248 + | carboxyl transferase SCO5536 6033266 - 6033463 + | hypothetical protein TERM 1933 6033508 - 6033473 - T 100 -27.8 -2.73364 | opp_overlap 6033476, overlap 6033476 CGCTGACCCGAACGA CAAGAGAGGCCCCTCC ACTC GGAGGGGCCTCTCTTG TTACGCCGGGCCCGG TERM 1934 6033476 - 6033505 + T 100 -23.7 -3.61398 | opp_overlap 6033476 6033473 TGACCCGAACGACAA GAGAGGCCCCTCC ACTC GGAGGGGCCTCTC TTGTTACGCCGGGCC TERM 1935 6033505 - 6033476 - T 100 -23.7 -3.51825 | opp_overlap 6033476, overlap 6033473 TGACCCGAACGACAA GAGAGGCCCCTCC ACTC GGAGGGGCCTCTC TTGTTACGCCGGGCC TERM 1936 6033646 - 6033613 - T 91 -17.3 -3.90588 | overlap 6033614 CACCCGGCAACGAAA CCGCCCCCGGCAGCC CAGT GGCCGCAGGGGGCGT CACGCAACCCGGCGC TERM 1937 6033645 - 6033614 - T 90 -20.8 -2.94032 | overlap 6033613 ACCCGGCAACGAAAC CGCCCCCGGCAGCC CAGT GGCCGCAGGGGGCG TCACGCAACCCGGCG SCO5537 6034290 - 6033766 - | ATP/GTP binding protein TERM 1938 6033885 - 6033901 + g 72 -13.7 -3.31792 | CGATCTGCAGCGCCT CCCGGAC CTC GTCCGGG TTGTACGGCTGCTGC SCO5538 6034900 - 6034328 - | hypothetical protein TERM 1939 6034887 - 6034900 + g 82 -3.7 -4.77036 | overlap 6034881 6034886 6034888 GATGACGGACCGCCT GGGGG TGTT CCCAC TTTTTCCTCCTCCGA SCO5539 6035417 - 6034995 - | hypothetical protein SCO5540 6038754 - 6035419 - | membrane protein SC1C221c TERM 1940 6035492 - 6035527 + g 74 -16.8 -3.15544 | CCGTTCGTTTCACTG CCTGCGTTGCGGCCTC GCTC GACGCCGCGCCGCAGG TTGCTCAGCCTGCCC TERM 1941 6035730 - 6035759 + g 70 -16.3 -2.78463 | ACCGCCAGGTGTCCT CGCCGCCCGCCCC CGGT GCGGCGGCCGGCG TCTCCTGGCCCACGT TERM 1942 6038641 - 6038663 + g 71 -12.6 -3.49048 | overlap 6038639 CGGCGGGGTGAAGTT GCCCCGGGCC GAT GGCTCGGGAC TGTTCTTGCTTCGCC TERM 1943 6039035 - 6038992 - R 80 -16.9 -3.2048 | gap 2, overlap 6038983 6038994 CCGAAACGTTATGAA CAG--CGGAGCCGACCGTGTC AAAG GACACAGTCGGCTCCGAACCG TCTACGACAAGTGCC TERM 1944 6039031 - 6038994 - R 93 -22.1 -3.16288 | overlap 6038992 6038983 GAAACGTTATGAACA GCGGAGCCGACCGTGTC AAAG GACACAGTCGGCTCCGA ACCGTCTACGACAAG SCO5541 6039613 - 6039089 - | ATP-GTP binding protein SCO5542 6040043 - 6039645 - | hypothetical protein SCO5543 6040568 - 6040155 - | hypothetical protein SCO5544 6044567 - 6040578 - | membrane protein SC1C225c TERM 1945 6044129 - 6044187 + g 70 -14 -3.25223 | TCGAGCCGTGGGCCA GCGGGCCGGCGGA-CTGGTCG-CGCTCCTC CTG GAGC-GCGGCGGCCAGCTCCG-TGGCCTGC TTGGTCATCTCGGTC SCO5545 6045182 - 6045358 + | hypothetical protein SCO5546 6045485 - 6046270 + | hypothetical protein gltX 6046263 - 6047747 + | glutamyl-tRNA synthetase SCO5548 6047855 - 6048250 + | hypothetical protein SCO5549 6048321 - 6049055 + | hydrolase TERM 1946 6049135 - 6049125 - T 71 -8.2 -4.03219 | opp_overlap 6049124 ACGCTAGAACAAGAA CCCC TAC GGGG CTTGCGTTCCAGTGG SCO5550 6050379 - 6049735 - | transcriptional regulator SCO5551 6050461 - 6051033 + | hypothetical protein TERM 1947 6051030 - 6051085 + T 76 -17.4 -2.78596 | opp_overlap 6050997 6050995 6051037 CGCCCCGGACGAGGG CTGAGAACGGCGAAGGGCCCGCCGCG GCGT TGAGGCGGGCCCGTTGCCGGTCGGAG TGTCCTGGGACGGTC TERM 1948 6051078 - 6051037 - T 86 -18.6 -3.30441 | opp_overlap 6051030 GACGAGGGCTGAGAA CGGCGAAGGGCCCGCCGC GGCGTT GAGGCGGGCCCGTTGCCG GTCGGAGTGTCCTGG SCO5552 6051815 - 6051099 - | regulator SCO5553 6052013 - 6053443 + | isopropylmalate isomerase large subunit leuD 6053449 - 6054042 + | isopropylmalate isomerase small subunit TERM 1949 6054146 - 6054106 - f 100 -25.5 -3.10344 | opp_overlap 6054107 CGGCCACCCAACACA CCCGCCGTACCCCCGATCG GCC CGATCGGGGGTACGGCCGT TTCCGGATCCGTCCG TERM 1950 6054107 - 6054145 + F 100 -29 -3.57792 | opp_overlap 6054106 GGCCACCCAACACAC CCGCCGTACCCCCGATCG GCC CGATCGGGGGTACGGCCG TTTCCGGATCCGTCC SCO5555 6054328 - 6054558 + | hypothetical protein TERM 1951 6054763 - 6054734 - g 73 -15.7 -3.30243 | gap 1 AGCGATTGCCGACAA GC-TCGGCGGCCGG CAG CAGGCCGCCGACGC TGTCGACGCGGTCCT SCO5556 6054696 - 6055352 + | histone-like DNA binding protein SCO5557 6055700 - 6055467 - | hypothetical protein SCO5557a 6056348 - 6055710 - | hypothetical protein SCO5558 6056492 - 6057286 + | acyltransferase SCO5559 6057283 - 6058293 + | glycerol-3-phosphate dehydrogenase ddl 6058385 - 6059554 + | D-alanyl-alanine synthetase A TERM 1952 6059607 - 6059576 - T 84 -19.6 -2.78384 | gap 1, opp_overlap 6059581 6059605, overlap 6059578 6059581 CGTGTCGTGACCACA GAGAAGGCGACTCCC TCG GGG-GTCGCCTTCTC GCAGTATGATCAGCG TERM 1953 6059605 - 6059578 - T 73 -16.4 -2.94099 | gap 1, opp_overlap 6059581, overlap 6059576 6059581 TGTCGTGACCACAGA GAAGGCGACTCCC TCG GGG-GTCGCCTTC TCGCAGTATGATCAG TERM 1954 6059581 - 6059602 + T 73 -13.7 -3.32521 | opp_overlap 6059578 6059576 6059581 CGTGACCACAGAGAA GGCGACTCC CTCG GGGGTCGCC TTCTCGCAGTATGAT TERM 1955 6059602 - 6059581 - T 72 -12.3 -3.61902 | gap 1, opp_overlap 6059581, overlap 6059578 6059576 CGTGACCACAGAGAA GGCGACTCCC TCG GGG-GTCGCC TTCTCGCAGTATGAT SCO5561 6059965 - 6059732 - | hypothetical protein SCO5562 6060199 - 6061167 + | thiamine monophosphate kinase SCO5563 6061164 - 6061973 + | phosphomethylpyrimidine kinase TERM 1956 6062012 - 6061988 - T 100 -17.2 -4.62336 | AGGGCACGGCAAAAA GCCGGTCCAC ACGAG GTGGACCGGC TCCCTACAGCGGACC rpmB 6062244 - 6062059 - | 50S ribosomal protein L28 SCO5565 6062511 - 6064280 + | hypothetical protein TERM 1957 6064421 - 6064381 - g 75 -12.6 -3.63837 | gap 1, overlap 6064371 AGAACCCCTGAAGAA GGTGCTCGGCC-CCGCC ACCGCGAA GGTGATGGCCGAGCACC TCGGCCTGCACACCG SCO5566 6064343 - 6066571 + | ATP-dependent DNA helicase TERM 1958 6067143 - 6067169 + G 71 -4.3 -4.26903 | gap 1 GGCTTCGAAGCCATC CGGGCCCGTCGC TACG GCGA-GGGAACG TTTTGGTACGGTCGC SCO5567 6066627 - 6067214 + | DNA methylase SCO5568 6067241 - 6067720 + | phosphopantetheine adenylyltransferase SCO5569 6067854 - 6068993 + | hypothetical protein SCO5570 6069138 - 6069791 + | hypothetical protein rpmF 6069794 - 6069967 + | 50S ribosomal protein L32 TERM 1959 6070080 - 6070110 + G 72 -14.1 -3.4252 | gap 2 CACACGCTTCTGGAA GGGCGG-CTCG-GCT ATC AGCTCGAGTCCGCCC TTCTGGTGCGTGCAC rnc 6069987 - 6070805 + | ribonuclease III SCO5573 6070914 - 6071774 + | formamidopyrimidine-DNA glycosylase SCO5574 6072189 - 6071764 - | hypothetical protein SCO5575 6073466 - 6072276 - | transmembrane protein TERM 1960 6073180 - 6073213 + g 79 -18.9 -2.91264 | gap 1 TTGCGGCGGCGACGG CGCCCACCGCCGGGCT GGG AGCC-GCCGGTGGGCG TGTATCCGTCACGGG SCO5576 6073650 - 6073931 + | acylphosphatase TERM 1961 6074596 - 6074619 + F 85 -11 -4.41348 | overlap 6074599 AGGTGCCAGAGTCTG CAAGGGACGC TTCG GCGTCCCTTC TTTCTTTCCCGCCCC TERM 1962 6074599 - 6074616 + F 93 -12.7 -4.32678 | overlap 6074596 TGCCAGAGTCTGCAA GGGACGC TTCG GCGTCCC TTCTTTCTTTCCCGC SCO5577 6074834 - 6078394 + | chromosome associated protein SCO5578 6078582 - 6080000 + | sugar transporter SCO5579 6081583 - 6080126 - | transmembrane protein TERM 1963 6082013 - 6081968 - g 70 -16.1 -2.71268 | gap 1, overlap 6081965 6081963 CCGGACGATAGAGGA GGTCGACCTCCCGGACGGCGGC ACC GCCACCGTCGAGGA-GCCGCCC GTCGTCGAAGAGCTC SCO5580 6081738 - 6082976 + | docking protein TERM 1964 6083042 - 6083012 - T 100 -26.2 -3.29144 | opp_overlap 6083040 GCACCCGGGCGAGAA GCGCCCGCCTCCCG GAC CGGGAGACGGGCGC TTCGCCGTTGGCGGA SCO5581 6083772 - 6083101 - | hypothetical protein SCO5582 6084219 - 6085721 + | regulator SCO5583 6086031 - 6087377 + | ammonium transporter SCO5584 6087374 - 6087712 + | nitrogen regulatory protein P-II TERM 1965 6088761 - 6088704 - g 77 -9 -4.11751 | gap 3, overlap 6088694 AGGAACGGCGGAAAA CCG-GTCGCCGAGC-GCTCCCCGCTCGCC GAG GGCGT-CGTGGAGCAGGACGGCGAGGCGG TGCTCGCCCGCACCG SCO5585 6087777 - 6090284 + | PII uridylyl-transferase SCO5586 6090281 - 6091933 + | signal recognition particle protein TERM 1966 6093025 - 6092969 - g 73 -17.2 -2.65993 | overlap 6092960 ACGAGATCGACACCA TCGGC-CGCGCCCGCGGCGGCGGCTCCG GCA CGG-GCGGCCACGACGAGCGCGAGCAGA CCCTGAACCAGATCC SCO5587 6092050 - 6093996 + | cell division protein FtsH-like protein SCO5588 6094631 - 6094014 - | lipoprotein SCO5589 6095669 - 6094782 - | hypothetical protein TERM 1967 6094830 - 6094814 - G 73 -6.5 -4.34267 | TCAGATAACGGAAAA CGTTTGG CAT CCACACG GTCCCGTCCGGCCGC SCO5590 6096339 - 6096935 + | hypothetical protein rpsP 6097191 - 6097610 + | 30S ribosomal protein S16 SCO5592 6097613 - 6097852 + | hypothetical protein TERM 1968 6097869 - 6097909 + F 95 -24.8 -2.62396 | gap 1 GAATCGCAGCACCGG CT-CGGGCCGGGGAAGGCC ACTG GGCCGTCCCCGGCCCGCAG TCGTATGAGCCCGTC SCO5593 6097964 - 6098530 + | 16S rRNA processing protein SCO5594 6098530 - 6099363 + | tRNA (guanine-N1)-methyltransferase rplS 6099500 - 6099850 + | 50S ribosomal protein L19 SCO5596 6099896 - 6100675 + | signal peptidase I TERM 1969 6100827 - 6100806 - gf 75 -12.9 -3.66654 | CAGCGCAAGGTCAAA CGGCGGCGC AGAC GCGGCGCCG TCAAGGAGATCCCGC SCO5597 6100668 - 6102008 + | signal peptidase I SCO5598 6101641 - 6102651 + | signal peptidase I TERM 1970 6103501 - 6103479 - g 71 -12.7 -3.53012 | gap 1 GGCCCCCTCGCCAAA CGGGCCGCGG CCTC CCG-GGCCCG CAAGGGTGCGGAGCC SCO5599 6102756 - 6103532 + | signal peptidase I SCO5600 6103534 - 6104052 + | hypothetical protein SCO5601 6104109 - 6104417 + | hypothetical protein SCO5602 6104476 - 6104868 + | hypothetical protein SCO5603 6104868 - 6106493 + | hypothetical protein SCO5604 6106490 - 6107638 + | hypothetical protein TERM 1971 6107666 - 6107704 + F 95 -25.4 -2.87132 | opp_overlap 6107669, overlap 6107669 CCCTCCCGCTGCCTA GAAGACCGCCCCGGGTGC TCG GTGCCTGGGGCGGTCTTC TGTGTCCAGGGAGAG TERM 1972 6107669 - 6107701 + F 100 -21.3 -3.58726 | opp_overlap 6107669, overlap 6107666 TCCCGCTGCCTAGAA GACCGCCCCGGGTGC TCG GTGCCTGGGGCGGTC TTCTGTGTCCAGGGA TERM 1973 6107701 - 6107669 - f 75 -14.7 -3.28712 | opp_overlap 6107669 6107666 TCCCGCTGCCTAGAA GACCGCCCCGGGTGC TCG GTGCCTGGGGCGGTC TTCTGTGTCCAGGGA SCO5605 6107817 - 6108128 + | hypothetical protein SCO5606 6108415 - 6108125 - | hypothetical protein SCO5607 6108466 - 6108660 + | transcriptional regulator SCO5608 6108755 - 6109456 + | hypothetical protein TERM 1974 6109479 - 6109505 + T 100 -20.9 -3.76224 | GACTGGTATGGCGAA GCCCCGGAGGG GGAAG CCCTCCGGGGC TTTCGTGCGTCAGAG SCO5609 6109712 - 6109515 - | hypothetical protein SCO5610 6110413 - 6110051 - | hypothetical protein SCO5611 6111177 - 6111392 + | transcriptional regulator SCO5612 6111554 - 6113824 + | ATP binding protein SCO5613 6114108 - 6114659 + | hypothetical protein TERM 1975 6115028 - 6115011 - f 78 -9.1 -4.38154 | opp_overlap 6115024 ACATTTCCCAGAAAA GCACCCC GGGA AGGGTGC GTCCATCTTGCGTTG TERM 1976 6115249 - 6115234 - g 71 -6.8 -4.11692 | gap 1, opp_overlap 6115237 CAGCTACTGGGAAAA CGGC-CG GTA CGCGCCG AACGGCGTGAACATG SCO5614 6115124 - 6115315 + | transcriptional regulator SCO5615 6115312 - 6115662 + | hypothetical protein SCO5616 6115730 - 6116218 + | hypothetical protein SCO5617 6116205 - 6116621 + | hypothetical protein TERM 1977 6116962 - 6116919 - f 79 -16.8 -3.08813 | overlap 6116921 6116925 CCGGACCCGAACACA GATGAACCCCGGACCTCACC GCCA AGCGAATTCCGGGGTTCACC TTCCGCAATGACCGA TERM 1978 6116960 - 6116921 - f 75 -15.8 -3.10245 | overlap 6116919 6116925 GGACCCGAACACAGA TGAACCCCGGACCTCACC GCCA AGCGAATTCCGGGGTTCA CCTTCCGCAATGACC SCO5618 6117039 - 6117482 + | hypothetical protein SCO5619 6117794 - 6118300 + | hypothetical protein TERM 1979 6118352 - 6118310 - f 79 -17 -3.04144 | gap 1, overlap 6118313 GCCTGACCCTCAACA TGAGCCGGCCCGGCCGGGG TGGCAC CCCCGGCCGGGCCT-CTGA ATCGAACGGAACGAT TERM 1980 6118349 - 6118313 - f 84 -18.7 -2.74523 | gap 1, overlap 6118310 TGACCCTCAACATGA GCCGGCCCGGCCGGGG TGGCAC CCCCGGCCGGGCCT-C TGAATCGAACGGAAC TERM 1981 6118921 - 6118894 - g 82 -18.4 -3.07233 | overlap 6118885 GGAGAAGGCCGAAGA CGGCGGCTGGCC GGGT GGCCAGCCGCCC TACGGTTACGAGATC SCO5620 6118370 - 6120760 + | recombinase SCO5621 6121043 - 6121885 + | RNA polymerase sigma factor WhiG SCO5622 6122014 - 6122571 + | transcriptional regulator SCO5623 6123205 - 6122525 - | hypothetical protein rpsB 6123494 - 6124426 + | 30S ribosomal protein S2 TERM 1982 6124440 - 6124490 + F 93 -22.6 -3.06261 | gap 1 GACCCCTCACCACCT TC-GGGTGCCGGACGGCGGGGGC CGCACA GCCCCCGCCGTCCGGCCCGTAGA TCTTCAGACTTCGAG tsf 6124521 - 6125357 + | elongation factor Ts TERM 1983 6125456 - 6125402 - f 93 -22.2 -3.05816 | gap 1 GTAGGGTCGACGCAA GTCGTCGGC-GCCGTACGCGCATGC CGTGGC GCACGCGCGCGCGGCGGCGGACGAC AGCAGATCTGACGAG pyrH 6125563 - 6126324 + | uridylate kinase SCO5627 6126503 - 6127060 + | ribosome recycling factor TERM 1984 6127243 - 6127266 + G 91 -18.2 -3.61398 | opp_overlap 6127230 CAGGACGACGACCAG GGGACCGCTC GGCT GAGCGGTCCC TTGTTCCGGGACGAG SCO5628 6127060 - 6128235 + | integral membrane protein TERM 1985 6128319 - 6128285 - T 100 -21.4 -3.53012 | opp_overlap 6128287 TGCTGGTTCTTGAAA GAGGGACCCGTTGCCC ACC GGGCGGCGGGTCCCTC TTCGCATGTGCTCCG TERM 1986 6128287 - 6128317 + T 93 -22.6 -3.08438 | opp_overlap 6128285 CTGGTTCTTGAAAGA GGGACCCGTTGCCC ACC GGGCGGCGGGTCCC TCTTCGCATGTGCTC SCO5629 6131020 - 6128360 - | ATP /GTP-binding protein TERM 1987 6131177 - 6131155 - R 75 -12.6 -3.59979 | CGCCCCGAGCGGAAA CCGGCGCCCC GCA GGGGCACCCG AGTCGATCTGCGACA TERM 1988 6131380 - 6131342 - R 70 -14.7 -2.87344 | gap 1, opp_overlap 6131339 6131338 CACGTTCTTCACATA CCTGAGAGCCCTGCCACA GTTA CGTGT-AGGGCTCTCAGG GGATGTGCTATCCCC TERM 1989 6131687 - 6131744 + r 70 -13.9 -3.17392 | gap 1, overlap 6131691 6131693 GTAGTGGTCCCGGTC GAAGCCGGCGGGCCTGCCGCCTTCTCTG CCT CTGCGGCGGCGGTTGGCCCGCTGG-TCC TTCGGTTCCGGGATC TERM 1990 6131691 - 6131741 + r 86 -20.2 -2.78712 | overlap 6131687 6131693 TGGTCCCGGTCGAAG CCGGCGGGCCTGCCGCCTTCTCTG CCT CTGCGGCGGCGGTTGGCCCGCTGG TCCTTCGGTTCCGGG TERM 1991 6131995 - 6132042 + r 73 -10.6 -3.81575 | gap 3, overlap 6132038 TCTTGCAGGTCAGGC CGCCCCGGGACCGTCCGAGTCCC TCGTC GGGG--CGG-TGGTGCCGGGGCG TTGTCCTTTTTTCGG TERM 1992 6132038 - 6132048 + r 85 -4.6 -5.00616 | overlap 6131995 GGGGCGGTGGTGCCG GGGC GTT GTCC TTTTTTCGGGACCCG SCO5632 6132679 - 6132437 - | hypothetical protein TERM 1993 6133043 - 6133016 - R 95 -5.5 -5.2422 | opp_overlap 6133017, overlap 6133017 AAGTAGATGAAAAAA TGCACCTAGCA GTTGCA TGCAAGGTGCT GATCTGTGCATGATG TERM 1994 6133452 - 6133481 + r 93 -20.8 -3.06796 | opp_overlap 6133452 ACCTAGTGCACGGAA GGGGCGGCAACC CATTGA GGTTGCCGCCCC TTCCGTGCACTAGCC TERM 1995 6133481 - 6133452 - R 93 -21.5 -3.06915 | opp_overlap 6133452 ACCTAGTGCACGGAA GGGGCGGCAACCC ATTG AGGTTGCCGCCCC TTCCGTGCACTAGCC SCO5633 6135797 - 6133491 - | traSA:integrase fusion protein SCO5636 6137068 - 6136289 - | transcriptional regulator SCO5637 6137156 - 6137551 + | mutT-like protein TERM 1996 6137598 - 6137572 - T 73 -15 -3.16564 | opp_overlap 6137583 6137585 TCCCTACTTCATCAA GGCCCGCGCACG GCG CGGGCGCGCGCC GCCTCTACGGCGCGG TERM 1997 6137585 - 6137619 + T 71 -16.4 -2.66316 | gap 1, opp_overlap 6137572, overlap 6137583 AAGGCCCGCGCACGG CGCGGGCGCGCGCCG CCTCTA CGGCGCG-GCCCGCC TCCTGTCCTCGCCCC SCO5638 6138768 - 6137881 - | integral membrane protein SCO5639 6139295 - 6138765 - | hypothetical protein SCO5640 6139869 - 6139402 - | hypothetical protein SCO5641 6140843 - 6139887 - | transposase SCO5642 6141583 - 6140819 - | hypothetical protein SCO5643 6142177 - 6141650 - | hypothetical protein SCO5644 6142261 - 6142887 + | hypothetical protein TERM 1998 6143187 - 6143138 - g 70 -14.3 -3.30124 | gap 1, opp_overlap 6143129, overlap 6143114 CGCGATCGGTGAGAA GC-CGTTCCGTGCGAAGCAGCTCT CGC AGCACTACTTCGCGCGGTACGCGC ACGCCCCCGAGCAGT SCO5645 6143019 - 6144125 + | hypothetical protein TERM 1999 6144272 - 6144321 + F 93 -20 -3.44051 | gap 1, overlap 6144274 6144275 GTCACCACTCGAGCT GTTGC-GCCCTGCCCGGGACCCT CGCCA GGGGTTCCGGGCGGGGCCGCGTC TTCTCCTGGTCACCC TERM 2000 6144274 - 6144319 + F 100 -21.2 -3.29273 | gap 1, overlap 6144272 6144275 CACCACTCGAGCTGT TGC-GCCCTGCCCGGGACCCT CGCCA GGGGTTCCGGGCGGGGCCGCG TCTTCTCCTGGTCAC TERM 2001 6144275 - 6144318 + F 89 -22.5 -2.57243 | gap 1, overlap 6144274 6144272 ACCACTCGAGCTGTT GC-GCCCTGCCCGGGACCCT CGCCA GGGGTTCCGGGCGGGGCCGC GTCTTCTCCTGGTCA SCO5646 6144349 - 6145470 + | solute binding lipoprotein TERM 2002 6145499 - 6145554 + G 72 -13.9 -3.40611 | opp_overlap 6145484, overlap 6145500 6145508 GCGGGCGCGGGCCGT GCGCG-GGAGCGCGGCCCGGCTCGGCC TCAT GGCCGTGCCCG-TCGCGTTCTTCGCGG TGTTCTTCGCCTACC TERM 2003 6145500 - 6145553 + G 73 -17.4 -2.64045 | opp_overlap 6145484, overlap 6145499 6145508 CGGGCGCGGGCCGTG CGCG-GGAGCGCGGCCCGGCTCGGCC TCAT GGCCGTGCCCG-TCGCGTTCTTCGCG GTGTTCTTCGCCTAC TERM 2004 6145508 - 6145544 + G 79 -13.6 -3.65201 | gap 1, opp_overlap 6145484, overlap 6145500 6145499 GGCCGTGCGCGGGAG CGCGGCCCGGCTCGGCC TCAT GGCCGTGCCCG-TCGCG TTCTTCGCGGTGTTC SCO5647 6145467 - 6147128 + | ABC transporter integral membrane protein SCO5648 6147131 - 6148177 + | ABC transporter ATP-binding protein SCO5649 6148202 - 6149002 + | hypothetical protein TERM 2005 6149040 - 6149008 - T 100 -28.5 -2.62184 | GTTCGGCTGACACGA CGGTGGCCCGCCCCG GAA CGGGACGGGCCACCG CCGTGAACGGGTCGG SCO5650 6149768 - 6149064 - | hypothetical protein SCO5651 6151109 - 6149925 - | hypothetical protein SCO5652 6151543 - 6151136 - | hypothetical protein SCO5653 6153109 - 6151649 - | integral membrane protein SCO5654 6153867 - 6153091 - | ABC transporter ATP-binding protein SCO5655 6155446 - 6154073 - | hypothetical protein SCO5656 6155949 - 6155449 - | transcriptional regulatory protein SCO5657 6156130 - 6157569 + | aldehyde dehydrogenase SCO5658 6157741 - 6158940 + | polyamine-binding lipoprotein SCO5659 6158953 - 6159492 + | integral membrane protein SCO5660 6160669 - 6159509 - | secreted peptidase SCO5661 6161548 - 6160823 - | hypothetical protein SCO5662 6162715 - 6161552 - | adenosine deaminase TERM 2006 6161925 - 6161970 + g 70 -16.1 -2.62263 | gap 1 CCGTGCCCGATGCGT TCGGCGCGCAGGTCGATGAGGG CCT CCCACA-CGGTCTGCGGGCCGG TCGTCTCGCCGGCGT SCO5663 6162772 - 6163452 + | integral membrane protein SCO5664 6163511 - 6163960 + | integral membrane protein SCO5665 6164663 - 6164022 - | hypothetical protein SCO5666 6164842 - 6166377 + | gamma-aminobutyraldehyde dehydrogenase SCO5667 6166490 - 6167689 + | ABC-transporter polyamine-binding lipoprotein SCO5668 6167695 - 6168888 + | polyamine ABC transporter ATP-binding protein SCO5669 6168888 - 6169817 + | polyamine ABC-transporter integral memb rane protein SCO5670 6169818 - 6170618 + | polyamine ABC-transporter integral memb rane protein SCO5671 6170654 - 6172081 + | oxidoreductase TERM 2007 6172150 - 6172197 + F 95 -19.3 -3.61356 | gap 1 AATGCGGCCGGGAGA CCTCCCTCTCCCTCGT-GACGC ATCCC GCGTCGACGAGTGAAAGGGAGG TTTCACATGCCTGGT SCO5672 6172204 - 6172662 + | hypothetical protein SCO5674 6175318 - 6174575 - | integral membrane protein SCO5673 6172804 - 6174636 + | secreted chitinase TERM 2008 6175180 - 6175130 - Gf 100 -31.3 -3.30441 | CAGCAGCTCGGAGAA CCGGTCGGGGTGGACGAGCGCCC CGCTC AGCCGCTCGTCCACCCCGACCAG GGGGCCGTCGGCGAC SCO5675 6175387 - 6176157 + | hypothetical protein TERM 2009 6176206 - 6176159 - T 100 -24.4 -3.05715 | opp_overlap 6176166, overlap 6176161 6176166 AACCGGGGGAGTGAA CACCGAAGGGCCGGCACA AGGGGGGGGGAG TGTGCCGGCCCTTCGGTG AACCACCGTCCCGAG TERM 2010 6176204 - 6176161 - T 93 -21.2 -3.08679 | opp_overlap 6176166, overlap 6176159 6176166 CCGGGGGAGTGAACA CCGAAGGGCCGGCACA AGGGGGGGGGAG TGTGCCGGCCCTTCGG TGAACCACCGTCCCG TERM 2011 6176301 - 6176320 + T 77 -15 -3.48276 | opp_overlap 6176300 CGATCGGTGAGGAAG CCGGAGCC CGTG GGCTCCGG TTGTGTGCGCGAGGC TERM 2012 6176374 - 6176399 + T 85 -19.1 -3.07534 | GCCTCGTCCTGATGA TCCGCCCACAG TCCC CTGTGGGCGGA TGTATCTCTCATCTG SCO5676 6177891 - 6176557 - | 4-aminobutyrate aminotransferase SCO5677 6178250 - 6180280 + | ATP/GTP binding protein SCO5678 6180444 - 6182102 + | regulatory protein SCO5679 6182246 - 6183691 + | aldehyde dehydrogenase SCO5680 6184114 - 6183701 - | cytidine deaminase SCO5681 6185315 - 6184140 - | glycosyl transferase SCO5682 6186445 - 6185312 - | integral membrane protein SCO5683 6186588 - 6187784 + | two-component system sensor kinase TERM 2013 6188039 - 6187996 - g 74 -12.3 -3.7941 | gap 1 GATGCCGCACAAGAA CGGCATCG-AGGCGGCCCGG GAGAT CCTGGCCGCCTCCGGCGGCG CCACGAAGATCCTGA SCO5684 6187781 - 6188494 + | two-component system response regulator SCO5685 6191418 - 6188536 - | sugar hydrolase TERM 2014 6191608 - 6191630 + H 93 -13.4 -4.34402 | opp_overlap 6191605, overlap 6191611 TCCCTCACGACACCG CAGCCGACGG CCA CCGTCGGGTG TTTTGGTGTGCCACG SCO5686 6191668 - 6193353 + | lipoprotein TERM 2015 6193467 - 6193434 - g 74 -12.3 -3.7282 | overlap 6193437 CGATGCGACGAAGAA GACCCCGGCGGCGTC CGGC GACGCCACCGGCCCC GACGGCGGGAGGCGG SCO5687 6193381 - 6194421 + | transport system integral membrane protein SCO5688 6194418 - 6195389 + | transport system integral membrane protein SCO5689 6195389 - 6197359 + | beta-galactosidase SCO5690 6197356 - 6199599 + | hypothetical protein SCO5691 6199638 - 6200372 + | hypothetical protein SCO5692 6201527 - 6200514 - | transcriptional regulator SCO5693 6201820 - 6203796 + | acyl CoA dehydrogenase SCO5694 6203922 - 6205178 + | 1-deoxy-D-xylulose 5-phosphate reductoisomerase SCO5695 6205187 - 6206479 + | metalloprotease TERM 2016 6206523 - 6206489 - f 100 -21.5 -3.44229 | opp_overlap 6206489 ACCTGACGACGAGAA GCCCGATCCGGAGAG CCTGT CCCTCCGGACCGGGC TTCACTCACCTCGCC TERM 2017 6206489 - 6206523 + F 79 -17.1 -3.06796 | opp_overlap 6206489 ACCTGACGACGAGAA GCCCGATCCGGAGAG CCTGT CCCTCCGGACCGGGC TTCACTCACCTCGCC ispG 6206675 - 6207832 + | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase TERM 2018 6208055 - 6208018 - f 75 -12.6 -3.64703 | opp_overlap 6208028 6208031 CCGGCCTGATCCAAA CGGCACCCCCTAGTGC CGCGTC GCCCCAGGGGGCGGCG CGGCATATTCATGGC TERM 2019 6208028 - 6208062 + F 86 -18.7 -3.14931 | gap 1, opp_overlap 6208018, overlap 6208031 CCAAACGGCACCCCC TAGTGCCGCGTCGCCC CAGG GGGCGGCGCGGCA-TA TTCATGGCAGGTACA TERM 2020 6208031 - 6208060 + F 100 -22.9 -3.1372 | opp_overlap 6208018, overlap 6208028 AACGGCACCCCCTAG TGCCGCGTCGCCC CAGG GGGCGGCGCGGCA TATTCATGGCAGGTA SCO5697 6208102 - 6208965 + | hypothetical protein TERM 2021 6209252 - 6209302 + G 72 -16 -2.80016 | overlap 6209250 CACTGGTGGTCCACG GTCGTCGAGCCGTACCTCCGCGCC CAG GGCACCGACGCCTGGCTCGACGAC TCCTTCGTCATCACG SCO5698 6209024 - 6209566 + | hypothetical protein SCO5699 6209640 - 6211343 + | prolyl-tRNA synthetase SCO5700 6212816 - 6211917 - | kinase SCO5701 6213359 - 6212856 - | hypothetical protein SCO5702 6213925 - 6213362 - | lipoprotein SCO5703 6214338 - 6214871 + | hypothetical protein nusA 6214874 - 6215896 + | transcription elongation factor NusA SCO5705 6215999 - 6216304 + | hypothetical protein TERM 2022 6216350 - 6216323 - f 73 -14.8 -3.24032 | opp_overlap 6216326, overlap 6216321 6216326 ACGTGGTAAGGAAGA CATGCCGCGCGG AACC CCGCGCAGCTTG GTACCTCGCGAGTCG infB 6216466 - 6219567 + | translation initiation factor IF-2 TERM 2023 6219591 - 6219640 + F 100 -28 -3.45832 | gap 1 ACTTCCGGGAGTGAC CGGTCCGGGGCCGGTCGGCGGAG CACAA TTCCGTCGATCGGCCCCGG-CCG TTCGTTGTACGGTTC SCO5707 6219719 - 6220012 + | hypothetical protein rbfA 6220097 - 6220579 + | ribosome-binding factor A TERM 2024 6220633 - 6220595 - g 70 -16.1 -2.71763 | gap 1, opp_overlap 6220596 6220596, overlap 6220592 6220587 6220623 CCGAGAAGCACACCA CGCCCGACGGCCTTGTCA TCGT CGACAAG-CCGTCGGGCT TCACTTCGCACGACG TERM 2025 6220596 - 6220632 + G 82 -18.9 -3.17075 | gap 1, opp_overlap 6220595 6220592 6220587 6220623, overlap 6220596 CGAGAAGCACACCAC GCCCGACGGCCTTGTC ATCGTC GACAA-GCCGTCGGGC TTCACTTCGCACGAC truB 6220576 - 6221481 + | tRNA pseudouridine synthase B SCO5710 6221737 - 6225837 + | large Pro/Ala/Gly-rich protein SCO5711 6225981 - 6226937 + | bifunctional riboflavin kinase/FMN adenylyltransferase SCO5712 6228131 - 6227052 - | ABC transporter ATP-binding protein SCO5713 6229324 - 6228128 - | ABC transporter ATP-binding protein SCO5714 6230274 - 6229321 - | peptide transport permease SCO5715 6231227 - 6230271 - | peptide transport system permease TERM 2026 6231250 - 6231285 + r 75 -15.3 -3.28712 | GGGTACGCGCTGCGG GTGAGCCCCCGCGGC GCCGCG GCCGCGGGAGCCCGC TTCTCGACGGCGGAG SCO5716 6233175 - 6231310 - | peptide transport system secreted peptide binding protein TERM 2027 6233477 - 6233529 + r 76 -16.1 -3.20841 | overlap 6233481 6233483 6233508 6233510 TTCGGAGGTGGTGGG GCTACTGCTGGGGCGGGGGCGGAGG GGG CGTCTGCCCCTGCTGCGGCTGTTGC TGTTGCTGTGGCTGT TERM 2028 6233481 - 6233525 + r 73 -14.1 -3.40907 | overlap 6233477 6233483 6233508 6233510 GAGGTGGTGGGGCTA CTGCTGGGGCGGGGGCGGAGG GGG CGTCTGCCCCTGCTGCGGCTG TTGCTGTTGCTGTGG TERM 2029 6233483 - 6233523 + r 73 -15.3 -3.26933 | overlap 6233481 6233477 6233508 6233510 GGTGGTGGGGCTACT GCTGGGGCGGGGGCGGAGG GGG CGTCTGCCCCTGCTGCGGC TGTTGCTGTTGCTGT SCO5717 6236729 - 6233478 - | hypothetical protein TERM 2030 6237774 - 6237805 + G 73 -18 -2.62184 | opp_overlap 6237747 6237774, overlap 6237759 GGCCCTCTGCAACCA GGTGGCCTTCGTCG ACCT CGACGACGGCCGCC TGCTCTGGCAAAACC SCO5718 6237208 - 6238782 + | secreted protein SCO5719 6239620 - 6238820 - | hypothetical protein TERM 2031 6239532 - 6239519 - G 71 -9.5 -3.88583 | overlap 6239520 GAAACCCTTCAGAAA GCGCC GGGG GGCGC GGCGTGCGCCCGGCG SCO5720 6240885 - 6239617 - | hypothetical protein SCO5721 6241070 - 6242596 + | hypothetical protein SCO5722 6242668 - 6243909 + | serine protease (secreted protein) SCO5723 6244234 - 6243938 - | regulator, BldB SCO5724 6244538 - 6244912 + | hypothetical protein SCO5725 6244949 - 6245260 + | hypothetical protein SCO5726 6245381 - 6245860 + | hypothetical protein SCO5727 6245884 - 6246486 + | hypothetical protein SCO5728 6247155 - 6246517 - | secreted protein SCO5729 6249421 - 6247184 - | hypothetical protein TERM 2032 6248693 - 6248716 + g 87 -6.7 -4.8622 | GAATAGGAGAGCCCC TTTGCCGCC AAGTCC GGTGGCGAA TTTTTCATTGAAGAG TERM 2033 6249086 - 6249097 + g 71 -4.4 -4.23674 | overlap 6249090 GACGCGCCCCTCATT CATC TTGA GATG TTTGTCTTCATGGAC TERM 2034 6249090 - 6249123 + g 71 -5.3 -4.26461 | overlap 6249086 CGCCCCTCATTCATC TTGAGATGTTTGTCT TCAT GGACATACTTCTCGA TTGTTTTCAGTTCGT SCO5730 6249845 - 6249423 - | hypothetical protein SCO5731 6251263 - 6249911 - | secreted serine protease SCO5732 6252847 - 6251294 - | hypothetical protein SCO5733 6253335 - 6252847 - | hypothetical protein SCO5734 6257372 - 6253407 - | ATP/GTP binding protein membrane protein SCO5735 6257530 - 6259005 + | integral membrane protein rpsO 6259203 - 6259490 + | 30S ribosomal protein S15 TERM 2035 6259502 - 6259534 + F 93 -17.7 -3.84825 | opp_overlap 6259506 CTAGCACGCCGTGAA GGGAGCGGTTCCCAT CGT AAGGGGGCCGCTCCC TTTGCTGTACGTGCG SCO5737 6259773 - 6261992 + | polynucleotide phosphorylase/polyadenylase SCO5738 6261989 - 6263368 + | protease SCO5739 6263394 - 6264146 + | dihydrodipicolinate reductase SCO5740 6264160 - 6264615 + | hypothetical protein SCO5741 6265245 - 6264691 - | hypothetical protein SCO5742 6265601 - 6265362 - | hypothetical protein thyX 6265793 - 6266533 + | FAD-dependent thymidylate synthase TERM 2036 6266683 - 6266638 - f 85 -15.3 -3.73775 | opp_overlap 6266637, overlap 6266642 TCTAGCCTGATCAAA GGGACCCGGCACTGCTTGAAC CCCC GAGCAGGCAGTGCCGGGCTCC ACCTCCGTTCCGACC dapA 6266753 - 6267652 + | dihydrodipicolinate synthase TERM 2037 6267758 - 6267786 + F 90 -22.5 -2.78463 | opp_overlap 6267751, overlap 6267742 6267744 TGCACGAACGTCATG CGCGCCACGTGCC ACC GGTACGTGGCGCG TGTGGTGAGGAGAGT SCO5745 6267805 - 6269490 + | hypothetical protein TERM 2038 6269516 - 6269567 + F 100 -30.2 -3.71378 | overlap 6269520 GCCCACCGACAGCGC CAACCTGGAGCGGGGCGCCCCGAT TTGC ATCGGGGCGCCCCGCTCCAGTACG TTTACATCTCCGCTC TERM 2039 6269520 - 6269563 + F 100 -38.4 -2.67244 | overlap 6269516 ACCGACAGCGCCAAC CTGGAGCGGGGCGCCCCGAT TTGC ATCGGGGCGCCCCGCTCCAG TACGTTTACATCTCC TERM 2040 6273810 - 6273799 - f 74 -2.2 -4.7254 | ACTGTTTACTAAAAA CACA GGTC CGTG CGAAGCCGTAAGGCG TERM 2041 6274472 - 6274456 - f 70 -2.9 -4.4715 | overlap 6274458 GCTCAACGGATAAAA GGTACCC CGG GGATAAC AGGCTGATCTTCCCC TERM 2042 6274983 - 6274963 - f 70 -9.7 -3.79909 | opp_overlap 6274954 6274972 TGAAACCACGAACAA CCCCATGTG CCA CACATGGTG CGGTTGAGTGTTTCA TERM 2043 6275128 - 6275177 + F 100 -29.7 -2.8085 | opp_overlap 6275135, overlap 6275135 CCGCCGAACAATTCT TAGAAAAGGGTTGGTCCCGGAAC TTCG GTTCCGGGACCAACCCTTTTTTG CTTTCCGTCACTTCG TERM 2044 6275135 - 6275170 + F 100 -27.8 -5.38497 | opp_overlap 6275135, overlap 6275128 ACAATTCTTAGAAAA GGGTTGGTCCCGGAAC TTCG GTTCCGGGACCAACCC TTTTTTGCTTTCCGT TERM 2045 6275170 - 6275135 - f 100 -27.8 -4.40572 | opp_overlap 6275135 6275128 ACAATTCTTAGAAAA GGGTTGGTCCCGGAAC TTCG GTTCCGGGACCAACCC TTTTTTGCTTTCCGT SCO5746 6275223 - 6275900 + | hypothetical protein TERM 2046 6276059 - 6276100 + T 90 -21.8 -2.81133 | gap 2, opp_overlap 6276067, overlap 6276067 CGTTTGGGGGCTCCA GCA--CGAAAGGCCCCGCCC ATCC GGGCGGGGCCTTTCGCATGC TCTGGTCAGTCCGTG TERM 2047 6276067 - 6276090 + T 100 -21 -3.63068 | opp_overlap 6276067, overlap 6276059 GGCTCCAGCACGAAA GGCCCCGCCC ATCC GGGCGGGGCC TTTCGCATGCTCTGG TERM 2048 6276090 - 6276067 - T 100 -21 -3.78775 | opp_overlap 6276067 6276059 GGCTCCAGCACGAAA GGCCCCGCCC ATCC GGGCGGGGCC TTTCGCATGCTCTGG SCO5747 6278856 - 6276106 - | regulatory protein SCO5748 6279265 - 6284754 + | sensory histidine kinase TERM 2049 6284911 - 6284965 + F 70 -14.8 -2.98823 | overlap 6284881 TCGGGCAGGGTCTCC CCGTACGTACGGGCACCTTCCGTGCG GCT CGCTCGGGCGGTGTGCGAACGTGGGG TGTGTGTAAACGGCG TERM 2050 6285705 - 6285660 - g 81 -18.4 -3.02144 | gap 2 CCAGCTGCGTGAACA GGCGGCCTTGCTG-CG-CCTCC AGTT GGAGGGCAACGGCAAGGCCGCC GTCGGCGAGGCCAAG SCO5749 6285256 - 6285930 + | two-component regulator SCO5750 6286097 - 6288886 + | ftsK-like protein SCO5751 6289190 - 6290053 + | hypothetical protein SCO5752 6290145 - 6291626 + | hypothetical protein SCO5753 6291623 - 6292414 + | phosphatidylglycerophosphate synthase TERM 2051 6292739 - 6292750 + G 73 -5.8 -4.26076 | CGCAGGACGGGCAGC CCGT GGGG ACGG TTTTCGTCGCCGTGG SCO5754 6292411 - 6292956 + | hypothetical protein SCO5755 6293066 - 6293446 + | hypothetical protein TERM 2052 6293473 - 6293517 + F 90 -15.6 -4.13767 | gap 1 CGTGTGCGTGTGAGG CCCCGGCCAGGGGCGCTCCGG AGAT CCGGAGCGACGA-GGTCGGGG TTTTCGCATGCCCGG SCO5756 6293651 - 6294121 + | hypothetical protein SCO5757 6294128 - 6294394 + | hypothetical protein SCO5758 6294450 - 6294824 + | transcriptional regulator SCO5759 6294821 - 6295306 + | hypothetical protein SCO5760 6296174 - 6295344 - | DNA glycosylase SCO5761 6301265 - 6296193 - | ATP-dependent DNA helicase TERM 2053 6298764 - 6298730 - G 86 -20.8 -3.04144 | CGGGGACGTCGAAGA CGTCCTGGAGGCACTC GCG GACCGCCTCCAGGACG ATCGGGAACGAGCCG SCO5762 6301456 - 6302322 + | AraC family transcription regulator SCO5763 6302319 - 6303089 + | membrane protein SC4H802 SCO5764 6303086 - 6303394 + | hypothetical protein SCO5765 6304429 - 6303404 - | hypothetical protein TERM 2054 6304005 - 6303956 - G 71 -14.8 -3.15861 | CACGACCGGCAGGAA GGGCGCGGCCGGTGCCCCGTCC CGGTCC GCACGGGTCACCGGCAGGGCAC CGTCCGGGGTGGACA SCO5766 6304454 - 6304648 + | hypothetical protein TERM 2055 6304779 - 6304728 - f 72 -16.4 -2.81133 | gap 1 CATCCACTGACGAGA CCGGGCAGGCCGCCCGGCACGCACC CCC GGCGGGCACCGCGCCGCCCGCC-GG CCCCCCGGCCCACGG SCO5767 6304820 - 6306028 + | hypothetical protein SCO5768 6306365 - 6306165 - | hypothetical protein recA 6306654 - 6307778 + | recombinase A recX 6307998 - 6308564 + | recombination regulator RecX SCO5771 6309319 - 6308921 - | hypothetical protein SCO5772 6309864 - 6309316 - | hypothetical protein SCO5773 6311784 - 6310159 - | monooxygenase TERM 2056 6311902 - 6311933 + r 100 -23.8 -3.23216 | opp_overlap 6311902 GCTTGCGTCAAGCGA CGGAGGCCGTGGCG ATCA TGCCACGGCCTCCG TTGATGGTCATACGA TERM 2057 6311933 - 6311902 - R 93 -23.1 -2.52464 | opp_overlap 6311902 GCTTGCGTCAAGCGA CGGAGGCCGTGGC GATCAT GCCACGGCCTCCG TTGATGGTCATACGA SCO5774 6312860 - 6311961 - | glutamate permease SCO5775 6313525 - 6312857 - | glutamate permease SCO5776 6314446 - 6313610 - | glutamate binding protein SCO5777 6315348 - 6314572 - | glutamate uptake system ATP-binding protein SCO5778 6315651 - 6316337 + | two-component system regulator SCO5779 6316347 - 6317792 + | two-component system sensor SCO5780 6318766 - 6317771 - | secreted protein TERM 2058 6319247 - 6319208 - g 73 -15.6 -3.27923 | gap 1 CTCCAACATGACCAA GCTG-GGGCCCGACGGCCG CGT CAGCCGCCGGGCCGACGGC AAGGTCCTCAAGGGC SCO5781 6318816 - 6319355 + | secreted protein SCO5782 6320686 - 6319451 - | transmembrane transport protein SCO5783 6321176 - 6320691 - | hypothetical protein SCO5784 6321291 - 6322367 + | two-component sensor SCO5785 6322367 - 6323026 + | two-component regulator SCO5786 6324283 - 6323081 - | secreted hydrolase SCO5787 6324453 - 6325970 + | hypothetical protein SCO5788 6326020 - 6326733 + | hypothetical protein TERM 2059 6326804 - 6326862 + T 95 -25.3 -2.52464 | gap 2 GTCGTAGTCGTCGAC -GCGCCCGCGGACGGTCCGGGGCCC-GCC CGG GGCCGGGCTCCGGACCGTCCGGCGGCGGA TCGGTTCAGGAAGCC SCO5789 6327161 - 6326868 - | hypothetical protein SCO5790 6327473 - 6327186 - | hypothetical protein miaA 6327656 - 6328594 + | tRNA delta(2)-isopentenylpyrophosphate transferase SCO5792 6328696 - 6329199 + | transmembrane protein dapF 6329272 - 6330141 + | diaminopimelate epimerase SCO5794 6330388 - 6332565 + | kinase/phosphohydrolase SCO5795 6332816 - 6334354 + | zinc metalloprotease membrane protein SCO5796 6334502 - 6335995 + | hypothetical protein TERM 2060 6336075 - 6336017 - T 86 -20.4 -2.73875 | gap 3, overlap 6336014 CGCGGCCGAACAGCA GGCCGACCGACCGAGGGCCCGCCCCCTGC CGCG GCAGGGGGCGGGCCCTCGGTCA--CGTA- CGGAGCCTGTACGGG SCO5797 6337308 - 6336091 - | secreted protein SCO5798 6338635 - 6337406 - | secreted protein SCO5799 6338949 - 6340547 + | aminotransferase SCO5800 6340587 - 6342533 + | hypothetical protein SCO5801 6342563 - 6343258 + | hypothetical protein SCO5802 6343581 - 6345575 + | ATP-dependent helicase TERM 2061 6345581 - 6345618 + T 79 -17.7 -2.78384 | GAGCGGCTGACAGCG CTGGGCCCCGGAACC GGCGCAGA GGTCCCGGGGCCCGG TCTGGTCGGCGGGGC SCO5803 6346368 - 6345664 - | LexA repressor TERM 2062 6346538 - 6346528 - H 84 -2.4 -5.08824 | opp_overlap 6346529, overlap 6346529 GTTCGAGTGAAAAAA CGCG AAT CGCT CGCTCGTATTGCATG SCO5804 6347027 - 6347575 + | transcriptional regulator NrdR TERM 2063 6349307 - 6349276 - g 70 -13 -3.41051 | overlap 6349277 GCACTCCGACGAGAA CGCCAAGGCCGTCC GCAT GGACGACCTCGACA CGCCGATCTGGGCCG SCO5805 6347744 - 6350647 + | vitamin B12-dependent ribonucleotide reductase TERM 2064 6350679 - 6350704 + T 87 -19.7 -3.21099 | opp_overlap 6350679 GCCGCCCATGAGTAA GGGGCGCCCGC AATG GTGGGCGCCCC TTACTCATACACCGG TERM 2065 6350704 - 6350679 - T 80 -17.5 -3.21099 | opp_overlap 6350679 GCCGCCCATGAGTAA GGGGCGCCCGC AATG GTGGGCGCCCC TTACTCATACACCGG SCO5806 6351333 - 6350725 - | hypothetical protein SCO5807 6351356 - 6352033 + | hypothetical protein TERM 2066 6352086 - 6352113 + F 70 -12.8 -3.34013 | gap 1 TGGAAACTGTGTGAC GTACGCCGTACGG GGC CCGTACGG-GTGC TTGGTTCCGCCCGTC SCO5808 6352147 - 6352806 + | hypothetical protein SCO5809 6352819 - 6353724 + | hydrolase SCO5810 6355559 - 6354012 - | transmembrane efflux protein TERM 2067 6355494 - 6355527 + g 76 -10.9 -4.05193 | gap 1 GACGGCGAGTGCGAT GCCGGGA-TGCCCCTC CCG GCGGGCCGCTCCCGGC TTCTTGTCTTTGATC SCO5811 6355747 - 6356367 + | transcriptional regulator TERM 2068 6356949 - 6356921 - g 71 -4 -4.38712 | gap 2, overlap 6356924 TCCAGCGCGACAAAA TG-ATGGCCGA-AC TGG GTGTCGACCATGCA GACTTCGGTTTCGCG TERM 2069 6357004 - 6357036 + G 72 -14 -3.41229 | opp_overlap 6356997 6356998 GTGCACAAGGCCGCA CTGGAGGAGCGGGG CCCCA CCCCGCACCACCGG TTGTCGTGGGCGTAT rnhB 6356449 - 6357150 + | ribonuclease HII SCO5813 6357219 - 6357857 + | hypothetical protein SCO5814 6358786 - 6358172 - | hypothetical protein SCO5815 6359074 - 6361233 + | ATP-dependent DNA helicase SCO5816 6361399 - 6363003 + | hypothetical protein SCO5817 6363009 - 6363893 + | DNA hydrolase SCO5818 6363949 - 6366183 + | ABC transporter SCO5819 6366349 - 6367236 + | sporulation transcription factor, WhiH TERM 2070 6367310 - 6367355 + F 100 -35.7 -2.78463 | CGGCCACCGCCGTCA CCTTCGGACCCCGTGGAGCCG CTCC CGGTTCCACGGGGTCCGAAGG TGTGATGAGCAGGCT TERM 2071 6367597 - 6367638 + F 100 -12.9 -4.62471 | gap 1 GGCCCATTCCCAAGC CGGTGGTCGGCCCCTGTCCG CCG TGGAC-GGGGCCGGAAGCCG TTTTTCAACGTTCCG TERM 2072 6368126 - 6368102 - g 75 -12.8 -3.63515 | overlap 6368087 6368117 GGCGACGGCGAAGAA GACCACCGCC AAGAA GGCGGCGGCC AAGAAGACCACCGCC TERM 2073 6368141 - 6368117 - g 75 -12.8 -3.63991 | overlap 6368102 GACCACCGCCAAGAA GGCGGCGGCC AAGAA GACCACCGCC AAGAAGGAAGACGGC SCO5820 6367665 - 6369200 + | RNA polymerase sigma factor TERM 2074 6369254 - 6369284 + F 100 -25.5 -3.71848 | GGTACGAGCGGCCAA GGCCCGGTCCCGC CAGGT GCGGGACCGGGCC TTCTTGCTGGGCAGC SCO5821 6369367 - 6370224 + | serine protease TERM 2075 6370757 - 6370772 + F 74 -7.5 -4.24342 | overlap 6370747 TCAGTGTCGGTCCCG CCGGC TGGGTT GCCGG TTTGTTCATGAGGAC SCO5822 6371006 - 6373129 + | DNA topoisomerase IV subunit B TERM 2076 6373144 - 6373180 + F 93 -23.8 -2.63715 | AGGCAGCTCAGCCGT CGGACCGGGCCCGG GAGCGTGAA CCGGGCCCGGTCCG TCGTGTGCGGTCCGT SCO5823 6373348 - 6373872 + | integral membrane protein SCO5824 6373869 - 6375023 + | two-component sensor SCO5825 6375020 - 6375709 + | two-component response regulator TERM 2077 6375823 - 6375793 - g 70 -12.5 -3.3782 | gap 1 CATGCAGTCAAGCAA CGATCCGCCCCGCG GCGC CG-GGGGCGGTCCG GAATGCGCGGCCGAC TERM 2078 6376102 - 6376117 + G 74 -11.8 -3.78778 | CCGGAGGTTCGTGGT GCCGGC CGTC GCCGGC TTCTTCCTCTGGTAC SCO5826 6375779 - 6376357 + | hypothetical protein SCO5827 6376354 - 6377946 + | transmembrane transport protein SCO5828 6378663 - 6377983 - | two-component transcriptional regulator SCO5829 6380360 - 6378660 - | two-component sensor SCO5830 6381357 - 6380416 - | hypothetical protein SCO5831 6382677 - 6381412 - | citrate synthase-like protein SCO5832 6382802 - 6383974 + | citrate synthase TERM 2079 6384020 - 6383979 - T 76 -12.2 -3.85698 | gap 1, overlap 6383981 CGGTGGCCTGAGAAA CACGAGC-GGCCTGGTGCC GTTCG GGCGCCAGGCCTGGTCGGG GAGCGTCGAGCAAGG TERM 2080 6384018 - 6383981 - T 72 -13.4 -3.51934 | gap 1, overlap 6383979 GTGGCCTGAGAAACA CGAGC-GGCCTGGTGCC GTTCG GGCGCCAGGCCTGGTCG GGGAGCGTCGAGCAA SCO5833 6384351 - 6384115 - | hypothetical protein SCO5834 6385247 - 6384501 - | hypothetical protein TERM 2081 6385005 - 6385035 + g 85 -6.8 -4.70659 | gap 1, overlap 6385006 GGCCAGCAACATCCC GGCCGCGGCGGAG CCGAAC CTCC-CCGTGGCG TTTTTCCGTGTGACC TERM 2082 6386340 - 6386387 + G 71 -14.8 -3.05384 | gap 1 CGCGTGCCGCCGGGA CGCCG-ACGCCCCACCCGCCG ACGAACA CGGCATGTGGGGCGTCCTGCG TTACGTGGCCGACGG SCO5835 6385339 - 6386427 + | ATP/GTP-binding protein SCO5836 6388880 - 6386424 - | DNA topoisomerase IV subunit A SCO5837 6389216 - 6390568 + | zinc protease SCO5838 6390565 - 6391953 + | protease TERM 2083 6391967 - 6392004 + F 100 -30 -3.89614 | AGCGGCACGCGCGCG CGGCGGCCCCGGTGAC CGGTGT GTCACCGGGGCCGCCG TTTGTCCGGATTGGG TERM 2084 6392576 - 6392549 - g 77 -16.2 -3.28712 | overlap 6392524 6392552 GGCCCTCGCCCAGAA GCAGGCGGCCGC GGAC GCCGCCGCCCGC GAGGCGGCCCGCGAG TERM 2085 6392609 - 6392552 - g 84 -21.2 -2.82623 | gap 2, overlap 6392524 6392549 CCTCGCCCAGAAGCA GGCGGCCGCGGACGCCGCCGCCCGCGAG GCGG CCCGCGAGCGG-G-CGGCCGAGGCGGCC AAGGAGGCGCGCGAG SCO5839 6392322 - 6393074 + | hypothetical protein TERM 2086 6393082 - 6393104 + F 100 -13.4 -5.10767 | opp_overlap 6393082 ACGTCTGACGAAAAA GCCCCGGCTT CCC GAGTCGGGGC TTTTTGTATTCCATG TERM 2087 6393104 - 6393082 - f 91 -10.5 -4.7254 | opp_overlap 6393082 ACGTCTGACGAAAAA GCCCCGGCT TCCCG AGTCGGGGC TTTTTGTATTCCATG SCO5840 6393195 - 6393890 + | transcriptional regulator TERM 2088 6394028 - 6393989 - T 93 -14.3 -4.19506 | gap 1, opp_overlap 6393996, overlap 6393990 AGCGGAAGCGGAAAA GGCGAAAGGCCCGTCCGG TGGTC CCGG-CGGGCCTTTCGGT GCTGCTGTCCCGTCC TERM 2089 6394027 - 6393990 - T 81 -17.8 -3.11222 | gap 1, opp_overlap 6393996, overlap 6393989 GCGGAAGCGGAAAAG GCGAAAGGCCCGTCCGG TGGTC CCGG-CGGGCCTTTCGG TGCTGCTGTCCCGTC TERM 2090 6393996 - 6394021 + T 79 -14 -3.6959 | gap 1, opp_overlap 6393990 6393989 GCGGAAAAGGCGAAA GGCCCGTCCGG TGGTC CCGG-CGGGCC TTTCGGTGCTGCTGT SCO5841 6394326 - 6394045 - | phosphocarrier protein HPr SCO5842 6394529 - 6397648 + | hypothetical protein SCO5843 6397754 - 6398341 + | hypothetical protein SCO5844 6398341 - 6399534 + | hypothetical protein SCO5845 6399582 - 6400232 + | thymidine kinase SCO5846 6402331 - 6400262 - | secreted protein SCO5847 6402599 - 6403366 + | transcriptional regulator TERM 2091 6403394 - 6403439 + F 100 -22.6 -3.53444 | gap 1, opp_overlap 6403382 AGACCGGTCCCGAAC CCGC-CCGAGCCGGGCGTCGG AGCAC CCGACGCCCGGCTCGACGCCG TTTCGCCGGACGTCG SCO5848 6403579 - 6404886 + | tagatose 6-phosphate kinase SCO5849 6404883 - 6406040 + | AgaS protein SCO5850 6406090 - 6407082 + | hypothetical protein SCO5851 6407079 - 6408017 + | integral membrane protein TERM 2092 6408477 - 6408510 + G 76 -17.4 -2.91264 | gap 1, opp_overlap 6408466 AGAACCTCGCCGCCA CCCGCGCCGCGGCGC AGTGG GC-CCACGGCGCGGG TCTGTGGCTGGAGGC SCO5852 6408122 - 6408970 + | tagatose-bisphosphate aldolase SCO5853 6409828 - 6409025 - | hypothetical protein SCO5854 6410064 - 6410915 + | thiosulfate sulfurtransferase TERM 2093 6411168 - 6411137 - T 100 -23 -3.05384 | GCCGGTGGCACGCAA GCGGGGCCGCACCC ACCC GGGTGCGGCCCCGA CCTCGGTCACGTCAT SCO5855 6412257 - 6411199 - | DNA-binding protein TERM 2094 6412579 - 6412603 + rH 72 -12.8 -3.57615 | opp_overlap 6412577, overlap 6412586 ACTTCTGGCAAGAGG TGGCGCCCGG CCGTC CCGGGCGCGA TTTCCGCGATCTTGG SCO5857 6414875 - 6413538 - | FAD-dependent oxidoreductase SCO5856 6412730 - 6413614 + | hypothetical protein SCO5858 6415998 - 6414817 - | integral membrane protein TERM 2095 6414963 - 6414929 - GH 70 -9.8 -3.74693 | overlap 6414930 6414933 CGGTACCCGAGGAAA CCGACCGCGACCGCGA CGG CCCCGGCCACCGCCGG AACCCCGTACCCGGC hemH 6416236 - 6417363 + | ferrochelatase TERM 2096 6417460 - 6417418 - g 73 -16.2 -3.02511 | CCGACCTGCTGAAGA TCGCCCAGGAGGCCGCCCAC CGC GCGGGCGAGCTGCTGCGCGA CGGCCGCCCGGCCGA SCO5860 6417372 - 6418190 + | SuhB protein TERM 2097 6418396 - 6418454 + F 85 -16.6 -3.53012 | gap 2 CGATCGGTTCAGCGG CCCGCCCGCAC-GACGCCGCAGGC-GCC GGCGA GTCGGCCGGTGACGCCCGTGCGGGCGGG TTTCGCGCGCCGAGG SCO5861 6418515 - 6419081 + | hypothetical protein SCO5862 6419308 - 6419961 + | two-component regulator CutR SCO5863 6419968 - 6421212 + | two-component sensor (kinase) TERM 2098 6421362 - 6421376 + F 80 -11.4 -4.07885 | opp_overlap 6421362 6421361 6421371 CACCCTGTCGGAAAG CCGGGA AAA TCCCGG TTTTCAGGGCCCCTG SCO5864 6421618 - 6421914 + | hypothetical protein SCO5865 6421928 - 6422881 + | hypothetical protein SCO5866 6423359 - 6422895 - | hypothetical protein SCO5867 6423417 - 6424001 + | hypothetical protein SCO5868 6423998 - 6424549 + | deoxyuridine 5'-triphosphate nucleotidohydrolase TERM 2099 6424626 - 6424574 - g 89 -16.9 -3.94877 | ACGTCGCAAGAAGAA CGACGCCGCCGAGGACGCGGCCGGC GAG ACCGAGCAGGTCGTCGACAGCGTCG ACACCGAGGCGGACG SCO5869 6424551 - 6425303 + | hypothetical protein SCO5870 6425493 - 6426185 + | ABC transporter ATP-binding protein SCO5871 6426319 - 6428865 + | turgor pressure sensor SCO5872 6428862 - 6429545 + | turgor pressure regulator SCO5873 6429542 - 6430006 + | hypothetical protein SCO5874 6430010 - 6430828 + | hypothetical protein TERM 2100 6430843 - 6430894 + T 100 -46.2 -2.62184 | opp_overlap 6430848, overlap 6430845 ACGGACGGGACGGGA CAGTACGGCGGTGGGGCGCCCGGA ATTC TCCGGGCGCCCCACCGCCGTACTG TCCTGTGCCCCGACG TERM 2101 6430845 - 6430892 + T 100 -43 -2.85351 | opp_overlap 6430848, overlap 6430843 GGACGGGACGGGACA GTACGGCGGTGGGGCGCCCGGA ATTC TCCGGGCGCCCCACCGCCGTAC TGTCCTGTGCCCCGA TERM 2102 6430889 - 6430848 - T 100 -38.9 -2.63596 | opp_overlap 6430845 6430843 CGGGACGGGACAGTA CGGCGGTGGGGCGCCCGGA ATTC TCCGGGCGCCCCACCGCCG TACTGTCCTGTGCCC SCO5875 6431627 - 6430947 - | potassium uptake protein SCO5876 6432298 - 6431627 - | potassium uptake protein TERM 2103 6432409 - 6432379 - H 72 -13.2 -3.57144 | overlap 6432381 6432382 GGCTCGACGGGCAAA CATCTGCGGCCCCC ACC GAGGGCCGCAGCCA CCATCATGCCGGTCC TERM 2104 6432407 - 6432381 - H 79 -15.8 -3.36515 | overlap 6432379 6432382 CTCGACGGGCAAACA TCTGCGGCCCCC ACC GAGGGCCGCAGC CACCATCATGCCGGT TERM 2105 6432406 - 6432382 - H 82 -19.3 -2.61695 | overlap 6432381 6432379 TCGACGGGCAAACAT CTGCGGCCCCC ACC GAGGGCCGCAG CCACCATCATGCCGG TERM 2106 6432434 - 6432450 + H 75 -13.7 -3.55524 | overlap 6432430 CGGTCCACCGCCGTC GCACCCC GGT GGGGTGC TTCGTTTGCGTCGTT SCO5877 6432566 - 6433618 + | transcriptional regulator RedD TERM 2107 6436536 - 6436500 - g 78 -17.2 -3.05384 | gap 1 CGGGTGGCCACCGAA GCCGGGCCCTGGCCCGC CCGG GCGGGCC-GGCCGCGGC GCGCCGCGGTGAGCG SCO5878 6433668 - 6436616 + | polyketide synthase RedX TERM 2108 6437132 - 6437155 + G 72 -11.7 -3.63515 | gap 1 GTGTTCGTGGTGCAG GCCGCCACCG ATCCG CGG-GGCGGC TTCTTCGGACTGACC TERM 2109 6437766 - 6437737 - g 73 -9.9 -4.03888 | gap 1, overlap 6437738 GATCCAGAAGAACAA CGTCGCGCGAGCGC TGG GC-CTCGGGCGCCG GCGTCCCGCGGCCCG SCO5879 6436613 - 6437788 + | acyl-coa dehydrogenase RedW SCO5880 6437814 - 6438134 + | RedY protein SCO5881 6438859 - 6438206 - | response regulator SCO5882 6440310 - 6439123 - | RedV protein SCO5883 6441208 - 6440423 - | hypothetical protein SCO5884 6442166 - 6441276 - | hypothetical protein SCO5885 6442614 - 6442174 - | hypothetical protein TERM 2110 6442461 - 6442489 + g 78 -17.5 -3.17075 | GGCGGTCCAGCCAGT CGACGGGACCG GAGATCA CGGTCCCGTCG TTGGCTTCCGAGGCG SCO5886 6443976 - 6442753 - | 3-oxoacyl-[acyl-carrier-protein] synthase II SCO5887 6444218 - 6443973 - | acyl carrier protein TERM 2111 6444560 - 6444618 + H 91 -18.7 -3.32498 | gap 1 CAGGCCCACCGCACA CCGCGGCCGCTCCGCGGGCGGTGCCCGG TGAC CCGGGCGTC-CGTGCTGACCGGCCTCGG TTCCTGTCTGCCGTC SCO5888 6444587 - 6445594 + | 3-oxoacyl-(acyl carrier protein) synthase III SCO5889 6445654 - 6445917 + | hypothetical protein SCO5890 6445914 - 6447836 + | 8-amino-7-oxononanoate synthase SCO5891 6447950 - 6449548 + | peptide synthase SCO5892 6449549 - 6456442 + | polyketide synthase SCO5893 6456446 - 6457489 + | oxidoreductase SCO5894 6457476 - 6458318 + | thioesterase SCO5895 6458306 - 6459394 + | methyltransferase TERM 2112 6461769 - 6461753 - g 76 -10.1 -3.98627 | GCACGAACACAACAA GCGGCTC CCG GAACCGC CGTTGACCTTCGTCG SCO5896 6459417 - 6462218 + | phosphoenolpyruvate-utilizing enzyme SCO5897 6462296 - 6463483 + | oxidase SCO5898 6463526 - 6464206 + | hypothetical protein SCO5899 6464371 - 6465258 + | hypothetical protein SCO5900 6465627 - 6467702 + | hypothetical protein SCO5901 6467755 - 6469131 + | RNA methyltransferase SCO5904 6470874 - 6470494 - | hypothetical protein SCO5905 6473452 - 6470909 - | export protein SCO5906 6473606 - 6474202 + | transcriptional regulator SCO5907 6474436 - 6474317 - | hypothetical protein SCO5908 6474517 - 6474711 + | hypothetical protein SCO5909 6474708 - 6474914 + | hypothetical protein SCO5910 6474947 - 6475291 + | hypothetical protein SCO5911 6476991 - 6475426 - | oligopeptide binding protein TERM 2113 6479707 - 6479649 - g 73 -17.3 -2.65298 | overlap 6479648 6479652 GTCACCGACGACAAG GGAGCCACCGCCACCGCCAC-GAGGACGG TCA CCGTCGGCAGCGGCGGAGGCGGCGGCAC- CGAATGCAACGGGAC TERM 2114 6479705 - 6479652 - g 93 -24.5 -2.61727 | gap 1, overlap 6479648 6479649 ACCGACGACAAGGGA GCCACCGCCACCGCCAC-GAGGACGG TCA CCGTCGGCAGCGGCGGAGGCGGCGGC ACCGAATGCAACGGG SCO5912 6477438 - 6480035 + | secreted protease TERM 2115 6480112 - 6480058 - f 85 -20.6 -2.56596 | gap 1 CTCCGCACCAAGGCA CGACCCTCACGACGGCCCGGGGCGG CTCTCC CCGCCCCGGG-CGGCGTCCGGGGCG GCGGCAGGGGGGAGA SCO5913 6480200 - 6481435 + | secreted protease TERM 2116 6481482 - 6481512 + T 87 -16.2 -3.58343 | opp_overlap 6481478 CGGTCACATCACGAG GACGTCGACCGC CGCACGC GCGGTCGGCGTC TTTCCCCGTGCTCCG SCO5914 6482600 - 6481608 - | transcriptional regulator SCO5915 6482843 - 6483358 + | hypothetical protein SCO5916 6483675 - 6484187 + | hypothetical protein SCO5917 6484965 - 6485303 + | hypothetical protein TERM 2117 6486886 - 6486931 + T 100 -22.8 -4.34402 | gap 2, overlap 6486851 6486889 GATCGGGGAATGCGG CATGTGGTGAGGGCCCGGCCGG CGTG CCGGTCGGGCCCTCAC-AC-TG TTTTGGTGTCGGCGC TERM 2118 6486889 - 6486929 + T 100 -25.6 -3.77806 | gap 1, overlap 6486886 CGGGGAATGCGGCAT GTGGTGAGGGCCCGGCCGG CGTG CCGGTCGGGCCCTCAC-AC TGTTTTGGTGTCGGC SCO5918 6487272 - 6486961 - | hypothetical protein SCO5919 6487725 - 6487321 - | hypothetical protein SCO5920 6489268 - 6487772 - | DEAD-box RNA helicase TERM 2119 6489602 - 6489551 - R 100 -27.4 -3.54919 | overlap 6489539 6489552 6489555 AATCACTGCGGGAAA CGCATGTAGCTGGGGCCCGCACCC CGAA GGATGCGGGCCCCAGCTACAAGTA CGTGACAGTCGGCGT TERM 2120 6489601 - 6489552 - R 100 -28.7 -2.7263 | overlap 6489539 6489551 6489555 ATCACTGCGGGAAAC GCATGTAGCTGGGGCCCGCACCC CGAA GGATGCGGGCCCCAGCTACAAGT ACGTGACAGTCGGCG TERM 2121 6489598 - 6489555 - R 100 -33.4 -2.64274 | overlap 6489539 6489552 6489551 ACTGCGGGAAACGCA TGTAGCTGGGGCCCGCACCC CGAA GGATGCGGGCCCCAGCTACA AGTACGTGACAGTCG SCO5921 6489820 - 6489617 - | cold-shock domain-containing protein SCO5922 6491442 - 6490462 - | short chain dehydrogenase SCO5923 6493150 - 6492065 - | ABC transporter ATP-binding protein SCO5924 6494912 - 6493143 - | integral membrane protein TERM 2122 6494593 - 6494570 - G 70 -12.5 -3.40403 | TGCGCTCCAGCAGAA TCGCCATCG GCACCG CGATGGCGA GCGCGAACACGGTCG SCO5925 6495218 - 6494967 - | hypothetical protein SCO5926 6495736 - 6495215 - | hypothetical protein SCO5927 6496093 - 6495872 - | hypothetical protein SCO5928 6496986 - 6496282 - | hypothetical protein TERM 2123 6496758 - 6496743 - G 71 -4.6 -4.28254 | overlap 6496744 CCTCAAGACTGAAAA CCGGCT CCCA ACCCGG CGGCGGAACGGCCGG TERM 2124 6497198 - 6497141 - R 75 -12.5 -3.66654 | opp_overlap 6497146 6497147 6497154, overlap 6497142 GAGGCCAATGCCAAA GCGCTCTCGTGCCGGCGGAGGCACGCC TTCT GACGTGCCTCCACCGGCACCACTCAGT TCAGGCAGATTGAGC TERM 2125 6497197 - 6497142 - R 72 -16 -2.79671 | opp_overlap 6497146 6497147 6497154, overlap 6497141 AGGCCAATGCCAAAG CGCTCTCGTGCCGGCGGAGGCACGCC TTCT GACGTGCCTCCACCGGCACCACTCAG TTCAGGCAGATTGAG TERM 2126 6497146 - 6497193 + r 85 -19.8 -2.52543 | opp_overlap 6497142 6497141, overlap 6497147 6497154 CAATGCCAAAGCGCT CTCGTGCCGGCGGAGGCACGCC TTCT GACGTGCCTCCACCGGCACCAC TCAGTTCAGGCAGAT SCO5929 6498231 - 6497455 - | oxidoreductase SCO5930 6498298 - 6499377 + | NTP pyrophosphohydrolase TERM 2127 6499448 - 6499501 + T 93 -23.2 -2.63596 | gap 1, opp_overlap 6499452 GGCGTCCGCGGCGAG CAGACCGGTCGCGAAGGTCACCGCC CGCAC GGCGGCGACCCTCGCGAC-GGTCAG TACTGTCCGGTCAGG TERM 2128 6499497 - 6499452 - T 95 -25.6 -2.78384 | gap 1, opp_overlap 6499448 TCCGCGGCGAGCAGA CCGGTCGCGAAGGTCACCGCC CGCAC GGCGGCGACCCTCGCGAC-GG TCAGTACTGTCCGGT SCO5931 6500945 - 6499512 - | xylanase A TERM 2129 6500786 - 6500812 + g 76 -19.4 -2.62263 | opp_overlap 6500781 TGCCGAAGTAGCGGC CGCTCTGCGCCG CCG CGGCGCCGAGCG TGCTCTCGGCGGCGT SCO5932 6501336 - 6502763 + | arabinofuranosidase SCO5933 6503922 - 6502747 - | hypothetical protein SCO5934 6504150 - 6504752 + | sigma factor SCO5935 6504749 - 6505642 + | hypothetical protein SCO5936 6505787 - 6505626 - | hypothetical protein SCO5937 6506170 - 6505802 - | hypothetical protein SCO5938 6506775 - 6506167 - | hypothetical protein SCO5939 6506808 - 6507281 + | peptidylprolyl isomerase SCO5940 6507329 - 6507988 + | hypothetical protein SCO5941 6507985 - 6509133 + | aminotransferase SCO5942 6509216 - 6509833 + | hypothetical protein SCO5943 6510025 - 6510810 + | hydrolase SCO5944 6510803 - 6511951 + | hypothetical protein TERM 2130 6512779 - 6512836 + G 73 -16.2 -3.02144 | gap 1 GAACCCGCGGTCACC GCACGCTTCCGGGGGACCACGGTGGCC AAGGC GGGC-CCGTGGTCCCAGGGACCCGTGC TGTTGCAGGCCCTCA SCO5945 6511948 - 6513768 + | transferase SCO5946 6513765 - 6514538 + | hypothetical protein SCO5947 6514553 - 6515950 + | integral membrane protein SCO5948 6515947 - 6517140 + | oxidoreductase SCO5949 6517425 - 6517973 + | hypothetical protein SCO5950 6519544 - 6518093 - | export protein TERM 2131 6520250 - 6520284 + G 83 -19.9 -2.91264 | GCCGACGCCGACCGT GCGGCCCGCGCGGCG AGCAC CGCCGCGCGGGCGGG TGTGTGGGTGACGGG SCO5951 6519692 - 6520303 + | transcriptional regulator SCO5952 6520547 - 6521299 + | hypothetical protein SCO5953 6521302 - 6524043 + | hypothetical protein SCO5954 6524142 - 6526439 + | chitinase (secreted protein) SCO5955 6526940 - 6526506 - | hypothetical protein SCO5956 6526903 - 6527715 + | regulatory protein TERM 2132 6527756 - 6527777 + FH 73 -10.1 -3.92542 | CACCCCCCTTCAGTA GGCGCCC CGGTTGAC GGGCGCC TTATTTGCACGTCCA SCO5957 6527871 - 6529472 + | transport protein SCO5958 6530343 - 6529489 - | cobalt transport system ATP binding protein SCO5959 6531089 - 6530340 - | cobalt transport integral membrane protein SCO5960 6531446 - 6531090 - | cobalt transport protein CbiN SCO5961 6532141 - 6531443 - | cobalt transport protein CbiM SCO5962 6533018 - 6532428 - | transcriptional regulator SCO5963 6533658 - 6533083 - | hypothetical protein SCO5964 6535013 - 6533655 - | hypothetical protein SCO5965 6535301 - 6535768 + | integral membrane protein TERM 2133 6535902 - 6535859 - T 85 -19.8 -2.62396 | opp_overlap 6535863 CACGCCCGGACACGA CGGACGGACGGTCACC-CCG CACCCT CGGTGGTGACCGTCCGTC-G TGTCCGGGCTCAGTG TERM 2134 6535863 - 6535899 + T 85 -20.3 -2.62616 | gap 1, opp_overlap 6535859 CCCGGACACGACGGA CGGACGGTCACC-CCG CACCCT CGGTGGTGACCGTCCG TCGTGTCCGGGCTCA SCO5966 6539055 - 6535912 - | oxidase SCO5967 6539260 - 6539670 + | hypothetical protein SCO5968 6539766 - 6540974 + | bldA-regulated nucleotide binding protein SCO5969 6540971 - 6541324 + | hypothetical protein SCO5970 6541507 - 6541977 + | hypothetical protein SCO5971 6542306 - 6543229 + | hypothetical protein SCO5972 6543305 - 6544900 + | hypothetical protein SCO5973 6544981 - 6547509 + | phosphatase SCO5974 6548856 - 6547561 - | integral membrane ion exchanger SCO5975 6549048 - 6550304 + | arginine deiminase TERM 2135 6550605 - 6550572 - g 81 -17.6 -3.30124 | gap 1 GCTGATCTTCGAGAA GACCTCGA-CGCGCA CCCGC TGCGCGTTCGAGGTC GCCGCCGCCGACCAG SCO5976 6550399 - 6551406 + | ornithine carbamoyltransferase TERM 2136 6552202 - 6552222 + G 71 -9.6 -3.8512 | GGCCTCGGCGGCATC GGCGCCGG CACCA CCGCCGCC TTCTTCTCCTACATC SCO5977 6551536 - 6552975 + | amino acid permease SCO5978 6553420 - 6552935 - | hypothetical protein TERM 2137 6554369 - 6554353 - g 77 -2.1 -4.65895 | overlap 6554354 6554355 GCCTTCACGGAAAAA CGCCCCC CGA AGTGGCA AGGGAGGTAGACGGA SCO5979 6553552 - 6554379 + | enoyl-CoA hydratase SCO5980 6554384 - 6556789 + | salicylyl-CoA 5-hydroxylase SCO5981 6557688 - 6556777 - | hypothetical protein SCO5982 6558617 - 6557772 - | regulator TERM 2138 6558415 - 6558440 + g 71 -12.5 -3.53012 | gap 1 GCGCCGGCGGCCGTA CGG-GCGGGCAG CAG CAGCCCGCGCCG TTTCAGCCGGGACAC SCO5983 6560310 - 6558619 - | fatty acid-CoA ligase SCO5984 6560442 - 6561617 + | acyl-CoA dehydrogenase SCO5985 6561614 - 6562012 + | hypothetical protein SCO5986 6562040 - 6562867 + | oxidoreductase SCO5987 6563093 - 6562884 - | hypothetical protein SCO5988 6563335 - 6563778 + | hypothetical protein SCO5989 6564781 - 6563897 - | integral membrane protein SCO5990 6565028 - 6564792 - | hypothetical protein TERM 2139 6565158 - 6565143 - H 71 -6.8 -4.25104 | gap 1 CGGCCGGTACGAAAA GCGTCGC AGA GCG-CGC GAACGGGGGAAGAAG SCO5991 6565263 - 6565649 + | secreted protein SCO5992 6565701 - 6566195 + | integral membrane protein SCO5993 6566262 - 6567074 + | hypothetical protein SCO5994 6567071 - 6567973 + | integral membrane cytochrome biogenesis protein TERM 2140 6568324 - 6568350 + G 70 -14.4 -3.21099 | CACCGGGACATCCGG CATCCGGACCTG GGG CCGGTCCGGGTG TTCCTGGTCCGGCGG SCO5995 6568057 - 6568779 + | secreted protein SCO5996 6568779 - 6571592 + | hypothetical protein TERM 2141 6571797 - 6571754 - f 76 -16.7 -2.78384 | GCCGGGGTTAGTAGA CGC-CGGACGGCCCCTCGCCC GCGT GGTCG-GCGGCCGTCCGCGCG AGTCGCGCCGCCCGT SCO5997 6572032 - 6572550 + | secreted protein TERM 2142 6573122 - 6573159 + T 75 -13.3 -3.6135 | opp_overlap 6573113, overlap 6573114 6573113 GGACAACTGCGAGTA CCCCCCGCTGCCCCGCA TCCG TACAGGTCAGTGGGGGG TTTCGCGCTGTCTTT SCO5998 6574715 - 6573186 - | UDP-N-acetylglucosamine transferase TERM 2143 6574915 - 6574936 + H 72 -5.8 -4.33153 | GGCCGCTGCGGCCTC CGGTCGTG ATGGAC CACGAGCG TTTGTTGATGTTCAG SCO5999 6575305 - 6578019 + | aconitate hydratase TERM 2144 6578077 - 6578022 - f 100 -21.1 -3.51329 | gap 1, opp_overlap 6578070, overlap 6578023 GATCCGCAAGTAGAA GGCTGTTGCACGGGCCGTGTCCACCG TCCTC CGGAGGGCACGGCCCGTGCCGCA-CC ACCCGGCTGGTTCCC TERM 2145 6578077 - 6578023 - f 90 -21.3 -2.70476 | opp_overlap 6578070, overlap 6578022 ATCCGCAAGTAGAAG GCTGTTGCACGGGCCGTGTCCACCG TCCTC CGGAGGGCACGGCCCGTGCCGCACC ACCCGGCTGGTTCCC SCO6000 6578236 - 6578481 + | hypothetical protein SCO6002 6579171 - 6578743 - | hypothetical protein SCO6001 6578520 - 6578807 + | hypothetical protein SCO6003 6580073 - 6579213 - | DNA-binding protein TERM 2146 6579335 - 6579360 + g 73 -16.9 -3.04144 | gap 1 GCAGTTCCAGGTCCT CGCCGCCGGTCA TAC TG-CCGGCGGCG TGTTCCAGGTACAGG SCO6004 6584062 - 6580256 - | secreted ATP/GTP binding protein SCO6005 6584624 - 6586033 + | lipoprotein TERM 2147 6586102 - 6586069 - g 100 -25.3 -3.55444 | TCCCCACTGCCGAAA CCGCGAGCCGCCGGC CCGA GCCGGCCGCTCGCGG CGGGCGGCCGCGGCG SCO6006 6586041 - 6587102 + | transmembrane transport protein SCO6007 6587099 - 6588007 + | transmembrane transport protein TERM 2148 6588219 - 6588191 - f 70 -12.4 -3.34233 | TCATAACTTGTACAA GGTCCGCATCGC ACCGG GTGACGCGGACC CAGGGGATGAGGGTG SCO6008 6588242 - 6589453 + | transcriptional repressor protein SCO6009 6589575 - 6590690 + | solute-binding protein SCO6010 6590859 - 6591641 + | ABC transporter ATP-binding protein SCO6011 6591638 - 6592930 + | ABC transporter transmembrane protein TERM 2149 6592952 - 6593000 + T 100 -28.9 -3.53444 | opp_overlap 6592912, overlap 6592953 GCCGCACGGCCGACG CCGGTCCGCCCGCCCGCCCAG CTGAGCC CTGGGCCGGCGGGCGGACCGC TTTCCGCGCCCGTCG TERM 2150 6592953 - 6592999 + T 100 -32.4 -2.71924 | overlap 6592952 CCGCACGGCCGACGC CGGTCCGCCCGCCCGCCCAG CTGAGCC CTGGGCCGGCGGGCGGACCG CTTTCCGCGCCCGTC SCO6012 6594557 - 6593034 - | secreted chitinase (secreted protein) TERM 2151 6594471 - 6594437 - G 73 -17.1 -3.0263 | gap 1 AGTACGGCGCGAAGA CCCGGTCC-GGCAGCG GGGT CGCCGCCTGGGCCGGG CCGGTGCCGGACAGG SCO6013 6594926 - 6596854 + | 1-deoxy-D-xylulose-5-phosphate synthase TERM 2152 6597215 - 6597239 + G 73 -14.9 -3.21099 | opp_overlap 6597215 CGTCGCCAAGGACAA CGCCGGGCCCG CCA CGGCCCTGGCG TTCGTGGTCGCCGGC TERM 2153 6597239 - 6597215 - g 71 -12.7 -3.50853 | opp_overlap 6597215 CGTCGCCAAGGACAA CGCCGGGCCCG CCA CGGCCCTGGCG TTCGTGGTCGCCGGC SCO6014 6597042 - 6598553 + | cationic amino acid transporter SCO6015 6599033 - 6598656 - | hypothetical protein SCO6018 6600024 - 6601049 + | hypothetical protein SCO6019 6601234 - 6602355 + | hypothetical protein SCO6020 6603552 - 6602452 - | transcriptional regulator SCO6021 6603996 - 6605621 + | hypothetical protein SCO6022 6605637 - 6607259 + | hypothetical protein TERM 2154 6608866 - 6608887 + G 70 -12.9 -3.35679 | GCTGGGCATCCTGCT CGCCCGCCG CGAC CGGCAGGCG TTCTGCATCAACGAC SCO6023 6607256 - 6609016 + | hypothetical protein SCO6024 6609013 - 6611106 + | transferase SCO6025 6611138 - 6613105 + | hypothetical protein TERM 2155 6613152 - 6613126 - T 100 -26.6 -3.1855 | GCCCCGAACACCGAA GCGGGCCCCGCC GCC GGCGGGGCCCGC TTCACCTGCTCCGGG SCO6026 6615300 - 6613171 - | fatty acid oxidation complex alpha-subunit SCO6027 6616514 - 6615297 - | acetyl-coa acetyltransferase (thiolase) TERM 2156 6616317 - 6616353 + g 75 -12.9 -3.65046 | CAGGCCCTGGTCGCC GATCTGCGTGGTCGCGG CGA CGGCGACCTCGTCGATC TTCTTGGGGTCGAGA SCO6028 6617892 - 6616708 - | ribonuclease SCO6029 6618839 - 6618177 - | two-component regulator SCO6030 6619849 - 6619133 - | hypothetical protein SCO6031 6620001 - 6621068 + | uroporphyrinogen decarboxylase SCO6032 6622617 - 6621097 - | hydrolase SCO6033 6623033 - 6624127 + | hypothetical protein SCO6034 6624109 - 6625437 + | hypothetical protein TERM 2157 6625632 - 6625592 - g 100 -24.7 -3.14132 | GCGGTTCGCGATGAA GGCCTGCCCGGTCGACGAG GTA CTCGCCGCCCTGGCAGGCC GGGGCGCCGGTGCCG SCO6035 6625434 - 6626642 + | lysine/ornithine decarboxylase SCO6036 6626635 - 6627204 + | hypothetical protein SCO6037 6627211 - 6628443 + | transmembrane transport protein SCO6038 6629631 - 6628480 - | integral membrane protein TERM 2158 6628563 - 6628515 - G 70 -16.7 -2.73875 | gap 2, overlap 6628512 GCCGCCCGAACAGCA GCCCGGGCGGCTGCGGCGGGCGC GGGGT GC-CCCGGCGCAGCGGCC-AGGC GATCAGCATGCCGAC SCO6039 6631202 - 6629805 - | flavoprotein oxidoreductase SCO6040 6632213 - 6631230 - | lipoprotein TERM 2159 6633475 - 6633501 + G 70 -13.6 -3.21099 | TACCGCCGCTCGGAG GCCGCCGCGCTC CCC GAGGGCAGCGGC TTCCTCGTACCGCCG SCO6041 6632494 - 6633978 + | protoporphyrinogen oxidase SCO6042 6633983 - 6634714 + | hypothetical protein SCO6043 6636346 - 6634715 - | secreted protease SCO6044 6637228 - 6636431 - | integral membrane protein SCO6045 6638659 - 6637343 - | hypothetical protein TERM 2160 6637799 - 6637841 + g 70 -14.7 -3.28712 | gap 1 GGTACCGGTGCCCGA GGTGGGGGCGGCCGCT-CCG GTCC CGGTGGCCGCCGCCCGCCCC TTCTCCACGGCGACG SCO6046 6639552 - 6638803 - | hypothetical protein SCO6047 6639597 - 6640451 + | ABC transporter ATP-binding protein SCO6048 6640448 - 6641122 + | integral membrane protein SCO6049 6641344 - 6641114 - | hypothetical protein SCO6050 6642231 - 6641362 - | lipoprotein SCO6051 6643863 - 6642322 - | iron-sulfur binding oxidoreductase SCO6052 6645312 - 6643915 - | hypothetical protein SCO6053 6646190 - 6645402 - | hypothetical protein TERM 2161 6646285 - 6646239 - R 95 -25.9 -2.79183 | CTTACTGTCACGATA GGCCCGCCGCCGGG-CCGGGTGC CAT GC-CCCGGACCCGGCGGCGGACT CCCCGCTACACCCCC SCO6054 6647781 - 6646291 - | transmembrane transport protein SCO6055 6648371 - 6647790 - | carbonic anhydrase SCO6056 6648851 - 6648450 - | secreted protein TERM 2162 6648980 - 6648943 - R 100 -20.1 -4.16842 | opp_overlap 6648940, overlap 6648945 CGCACGGTCAAGAAA CACGTTAACCCTGCAAA GAGC TTTGCAGGGTTAACGGG GCGTTACGTGCCGGA TERM 2163 6648978 - 6648945 - R 100 -21.3 -3.68324 | opp_overlap 6648940, overlap 6648943 CACGGTCAAGAAACA CGTTAACCCTGCAAA GAGC TTTGCAGGGTTAACG GGGCGTTACGTGCCG SCO6057 6650093 - 6649041 - | ATP/GTP-binding integral membrane protein SCO6058 6650674 - 6651471 + | hypothetical protein SCO6059 6651616 - 6652161 + | hypothetical protein SCO6060 6652235 - 6653623 + | UDP-N-acetylmuramoyl-L-alanine ligase SCO6061 6653637 - 6654044 + | oxidoreductase TERM 2164 6654059 - 6654106 + F 100 -30.1 -3.08133 | gap 2, overlap 6654097 AACCGGCCGGTGAAC GGCGGCCGGGAGCG-GC-ACGGT GGAC ACCGTCGCTCGCTCCCGGCCGCC TTCGGTCGGTCGGTC SCO6062 6654298 - 6655458 + | ABC transporter ATP-binding protein SCO6063 6655455 - 6656168 + | ABC transporter permease protein SCO6064 6656165 - 6656830 + | ABC transporter permease protein SCO6065 6656904 - 6657866 + | secreted substrate-binding protein SCO6066 6658443 - 6657898 - | ATP/GTP-binding protein SCO6067 6658855 - 6658496 - | hypothetical protein SCO6068 6659276 - 6658857 - | hypothetical protein SCO6069 6661906 - 6659273 - | large secreted protein TERM 2165 6659333 - 6659390 + g 70 -16.2 -2.71204 | gap 2, opp_overlap 6659338, overlap 6659335 6659351 6659383 6659385 CGAGTGGGCGGCGGA GGAGAGCGCGTGCCCGTCGGTGGCGCGG TCGT CCGCGCCACCGACGCCTTCG-GC-CGCC TCGTCTGCTTCGTGT TERM 2166 6659386 - 6659338 - G 70 -16.6 -2.78384 | gap 1, opp_overlap 6659333 6659335 6659351 6659383 6659385 GGGCGGCGGAGGAGA GCGCGTGCCCGTCGGTGGCGCGG TCGT CCGCGCCACCGACGCCTTCG-GC CGCCTCGTCTGCTTC SCO6070 6662988 - 6661975 - | secreted solute binding protein SCO6071 6663344 - 6663991 + | A-factor receptor-like protein SCO6072 6664069 - 6666069 + | hypothetical protein SCO6073 6666219 - 6668399 + | cyclase TERM 2167 6668942 - 6668899 - g 100 -25.2 -3.44051 | overlap 6668900 CGTGGACGACGAGAA GCCCGGGGCCCGGGTCGTGG GCGT CCACGTGCCGGGCCCCGGGT ACGCGGCGGGCCTGG TERM 2168 6668941 - 6668900 - g 100 -28.7 -2.66216 | overlap 6668899 GTGGACGACGAGAAG CCCGGGGCCCGGGTCGTGG GCGT CCACGTGCCGGGCCCCGGG TACGCGGCGGGCCTG SCO6074 6668513 - 6669124 + | integral membrane protein SCO6075 6669938 - 6669117 - | hypothetical protein SCO6076 6670057 - 6671187 + | dipeptidase SCO6077 6671184 - 6672188 + | transferase SCO6078 6673944 - 6672199 - | alpha amylase TERM 2169 6674016 - 6674072 + H 80 -10.2 -4.29656 | gap 3, overlap 6674016 6674053 GGGGATCATTCCGCT GGG-GATTGCCCTCGCGCGCG-GCG GGTGTCGTGA CGCTCGCGCG-GGGGGCGCTCGCCC TTTTCCCGTTTTCTG SCO6079 6674122 - 6674673 + | hypothetical protein SCO6080 6675067 - 6676224 + | dehydrogenase SCO6081 6678649 - 6676232 - | alpha amylase TERM 2170 6677074 - 6677099 + g 70 -13.9 -3.29947 | GGGTGAGCACCGCCA GCGCGGCGCGG ACGT CGGCGCTGCGC TTGGTGTCATGGGTC SCO6082 6680826 - 6678718 - | glycogen debranching enzyme TERM 2171 6680937 - 6680974 + H 75 -14.2 -3.44319 | gap 1, overlap 6680938 CTGTCCGGCGGATCC TGCCGCAGACGCGGGGT CCGGC ACGCC-CGTCTGCGGCG TTGTCGTCGGTTGCC TERM 2172 6681683 - 6681641 - g 71 -15.6 -3.14132 | gap 1 CGGCCGGTCTACGAA CCGGTCC-ACGGCGACGAC TGGGTG GTCGCCGCCGCCGGACCCG CCGGCCAGGAGTGGG TERM 2173 6682230 - 6682180 - g 70 -13.7 -3.28712 | opp_overlap 6682178 6682217 6682218, overlap 6682181 CCTGCTCGTGCAGAA CTTCTCCGGCCGCCGCCTGCTGC GGATG GCCGAGGGCGGCGGCCGGGTACG GCTGCTCTTCCTGAA SCO6083 6681383 - 6682630 + | hypothetical protein SCO6084 6682745 - 6683479 + | DNA polymerase III subunit epsilon SCO6085 6684384 - 6683518 - | hypothetical protein TERM 2174 6684594 - 6684571 - g 72 -14.6 -3.33492 | gap 1, opp_overlap 6684581 TGACCGAGTCGAGAA GGCC-GGCGCA CCG TGCGCCCGGCC CGGACGCCCCTCGGG TERM 2175 6685157 - 6685202 + G 71 -7.3 -4.09685 | opp_overlap 6685145, overlap 6685181 GAACACTCCGCGCGA GCTGCACGAGGCGGCCGCG GTGGACGG CGCGGGAGCCTGGCGCCGC TTTTGCACGGTCACC SCO6086 6684546 - 6685493 + | transport system integral membrane protein SCO6087 6685490 - 6686323 + | transport system integral membrane protein TERM 2176 6686829 - 6686802 - g 72 -12 -3.61715 | gap 1, overlap 6686803 CACCCTGCTCAAGAA GTCCGGCGTCCGG ATC CCG-ACGCCGGAA CACCCCTGGAGCTGG SCO6088 6686323 - 6687615 + | solute-binding transport protein SCO6089 6687926 - 6688708 + | antibiotic resistance rRNA adenine methyltransferase SCO6090 6688705 - 6689961 + | antibiotic resistance macrolide glycosyltransferase SCO6091 6692311 - 6690041 - | integral membrane protein TERM 2177 6692608 - 6692644 + H 85 -16.6 -3.57651 | overlap 6692609 CGCCCGGCGCGGACC AGGCCGTCGTGCCC ACCCCCACG GGGCACGACGGCCG TTCTATGGTGTGCGG TERM 2178 6692609 - 6692643 + H 86 -20.1 -2.74269 | overlap 6692608 GCCCGGCGCGGACCA GGCCGTCGTGCCC ACCCCCACG GGGCACGACGGCC GTTCTATGGTGTGCG SCO6092 6692660 - 6693208 + | hypothetical protein SCO6093 6693968 - 6693222 - | secreted protein SCO6094 6694888 - 6693977 - | transport system integral membrane protein SCO6095 6695669 - 6694875 - | ABC transporter ATP-binding protein SCO6096 6696805 - 6695702 - | lipoprotein TERM 2179 6695908 - 6695958 + g 74 -16.7 -3.07043 | overlap 6695896 CCGGGTCCAGCACGT CCGCGGGCAGCGCCTTTCCGGAG TCCTT CTCCAGCTGGGCGTTGGCCGCGG TCTTCGCCTCGTCCG SCO6097 6698421 - 6697066 - | sulfate adenylyltransferase subunit 1 SCO6098 6699362 - 6698424 - | sulfate adenylyltransferase subunit 2 SCO6099 6699895 - 6699359 - | adenylylsulfate kinase SCO6100 6700715 - 6700005 - | phosphoadenosine phosphosulfate reductase SCO6101 6700891 - 6700712 - | hypothetical protein SCO6102 6702585 - 6700888 - | nitrite/sulphite reductase TERM 2180 6702911 - 6702869 - R 76 -9.1 -4.2803 | opp_overlap 6702877, overlap 6702870 CAGCTTAATCCAAAA TGTGGACACCCTTGTCTCG TGGAG CGAGACAAGGGTGTCGTGG GTCACACGTGCGGTG TERM 2181 6702877 - 6702903 + r 76 -17.4 -2.80816 | opp_overlap 6702870 6702869 TCCAAAATGTGGACA CCCTTGTCTCGT GGA GCGAGACAAGGG TGTCGTGGGTCACAC SCO6103 6703541 - 6702969 - | acetyltransferase SCO6104 6704931 - 6703618 - | secreted protein SCO6105 6706437 - 6705148 - | regulatory protein SCO6106 6708353 - 6706680 - | acyl-CoA dehydrogenase SCO6107 6708580 - 6709614 + | integral membrane protein SCO6108 6709909 - 6711471 + | esterase TERM 2182 6711790 - 6711770 - g 71 -12.5 -3.53012 | CGTCCCGGCCGGAAA GCCCGAGCG GCT CACCCGGGC CACCGTGGGCCGGGC SCO6109 6711507 - 6713030 + | secreted hydrolase TERM 2183 6713078 - 6713030 - T 88 -21.7 -2.62184 | gap 1, overlap 6713004 GCGCCCCGCACAGTA GGCGTTC-CGCCCGGCCCGCCG GAGCTT CGGCGGGCCGGGCGTGCACAGC GGCCCAGGGCTCAGC SCO6110 6714015 - 6713089 - | sugar kinase SCO6111 6715769 - 6714012 - | oligopeptide ABC transporter ATP-binding protein SCO6112 6716659 - 6715766 - | oligopeptide ABC transporter integral membrane protein SCO6113 6717615 - 6716656 - | peptide ABC transporter integral membrane protein SCO6114 6719485 - 6717677 - | peptide-binding transport protein TERM 2184 6719562 - 6719550 - H 72 -3.4 -4.57482 | GCATGCACAAACAAA GTTG AGTAA CAAC TAAGTATCTCCGTTT TERM 2185 6719600 - 6719587 - H 83 -3.7 -5.00616 | opp_overlap 6719593 CCGTTTCTGAAAAAA GTCCG GACC CGGGC GCAGCCGGGAATTAC SCO6115 6719695 - 6720918 + | transcriptional regulator SCO6116 6720968 - 6722509 + | hypothetical protein TERM 2186 6722547 - 6722529 - g 78 -17.4 -3.05384 | overlap 6722510 6722507 CGGTCCCGCACCGAA GGCCGCCG CAC CGGCGGCC GCCTCCCTGGAGATC SCO6117 6722506 - 6723300 + | hypothetical protein SCO6118 6723322 - 6724296 + | AraC family transcription regulator TERM 2187 6724478 - 6724501 + G 81 -16 -3.48276 | GTCACCGAGGGCGGC GCGGGCGCCT GGGC AGGCGTCCGC TTCTGTCCCGGCACC SCO6119 6724307 - 6724990 + | AraC family transcription regulator TERM 2188 6725048 - 6725081 + F 76 -15.9 -3.14931 | gap 1 GGCGCGGTCTCCACG AGCCGCCGCGCCTCGG CCG CCG-GGCGGGGCGGCG TTACTCGGGCATGAG SCO6120 6725136 - 6725624 + | hypothetical protein SCO6121 6726270 - 6725692 - | transcriptional regulator SCO6122 6726363 - 6726809 + | hypothetical protein SCO6123 6727275 - 6726883 - | quinone binding protein TERM 2189 6727231 - 6727216 - G 71 -8.2 -4.07885 | GAGCCGGCGGTAAAA GGCCAC GGAG GCGGCC ATGTCGGAGACGATG TERM 2190 6727349 - 6727320 - H 84 -13.5 -3.90112 | CGGTCTTGAAGGAAA CGGACACCGGGCC GGGC GGCACGGCATCCG CCGGTCGGAGGTGTG SCO6124 6727703 - 6728032 + | hypothetical protein SCO6125 6728081 - 6728752 + | membrane lipoprotein SCO6126 6729088 - 6728774 - | hypothetical protein SCO6127 6729231 - 6730739 + | carboxylesterase SCO6128 6730926 - 6730693 - | hypothetical protein SCO6129 6731834 - 6730923 - | DNA-binding protein SCO6130 6731917 - 6732270 + | hypothetical protein SCO6131 6733691 - 6732336 - | carboxypeptidase TERM 2191 6733875 - 6733917 + r 77 -10.4 -4.07568 | overlap 6733866 CCGAACGGGAAATTC CGTTGCCCTTCAGTTCCCCG GGG CGCGGGACTTCGGGGCATCG TTTTGCCGCCGGGCC SCO6132 6734480 - 6733884 - | hypothetical protein TERM 2192 6734358 - 6734334 - G 77 -17.1 -3.2614 | GACCGCGCAGACGAA GGGCACGGCCG CCC CGGCCGTGTCC ACCGTCGCCCACGGC SCO6133 6735859 - 6734477 - | hypothetical protein SCO6134 6736854 - 6735856 - | regulatory protein SCO6135 6737525 - 6736851 - | hypothetical protein SCO6136 6738541 - 6737522 - | transmembrane protein mmuM 6739466 - 6738552 - | homocysteine methyltransferase SCO6138 6739546 - 6740469 + | transmembrane protein SCO6139 6740466 - 6741632 + | sensor kinase SCO6140 6741629 - 6742288 + | two-component system response regulator SCO6141 6742909 - 6742307 - | transmembrane protein SCO6142 6742955 - 6743446 + | hypothetical protein SCO6143 6743443 - 6744198 + | hypothetical protein SCO6144 6744770 - 6744201 - | transcriptional regulator SCO6145 6744922 - 6746640 + | hypothetical protein SCO6146 6746637 - 6747161 + | hypothetical protein TERM 2193 6747172 - 6747222 + T 70 -13.8 -3.18681 | ACTGACCCGGCCCGG CGCCGAGGGGCGCGGGGTGCTC AGCCCGC GAGCACCCCGCGCACGAACGCG TTGGTGAACTTCCCC aldo 6748448 - 6747192 - | alditol oxidase SCO6148 6748555 - 6749883 + | hypothetical protein SCO6149 6750131 - 6751231 + | ribosome-associated GTPase SCO6150 6751304 - 6752737 + | ADA-like regulatory protein SCO6151 6752734 - 6753294 + | methylated-DNA-protein-cysteine methyltransferase SCO6152 6753739 - 6753257 - | small hydrophobic protein membrane protein TERM 2194 6753519 - 6753461 - G 70 -13.7 -3.23216 | opp_overlap 6753461 6753462 GGGGACCAGGACGAA GCCGAGGACGGCGCC-CGCGCCCGCGTAC GCC GTCAGCCGGCGCATGGCCTCGTCC-CGGC GTTTCCTGCGGGTCG SCO6153 6754784 - 6753801 - | regulatory protein SCO6154 6755707 - 6756879 + | hypothetical protein SCO6155 6756908 - 6758650 + | pyruvate dehydrogenase SCO6156 6758794 - 6759201 + | regulatory protein SCO6157 6760323 - 6759259 - | transmembrane protein TERM 2195 6760115 - 6760095 - G 72 -16.1 -2.90392 | GACCGTGGAAGGAGA GCGCCGCGG CGA CCGCGGCAC AGCAGAAGAGCAGGA SCO6158 6761426 - 6760581 - | hypothetical protein SCO6159 6761595 - 6762416 + | gntR family transcriptional regulator TERM 2196 6762612 - 6762645 + T 73 -14.6 -3.14211 | gap 1, opp_overlap 6762634 GGACCGCGCGCCCCG GGCCCGGGCGCCCTT GAGCG AAGGG-GCCCGGACC TTCCTGCCCGCCCCT SCO6160 6765049 - 6762662 - | bifunctional preprotein translocase subunit SecD/SecF SCO6161 6765518 - 6765129 - | secreted protein SCO6162 6766405 - 6765623 - | two-component system response regulator SCO6163 6767325 - 6766414 - | sensor kinase SCO6164 6767705 - 6768031 + | hypothetical protein SCO6165 6768101 - 6768478 + | hypothetical protein SCO6166 6768481 - 6769299 + | hypothetical protein TERM 2197 6769692 - 6769656 - g 75 -13 -3.64703 | GCCGCCGCACGGAAA CCGGTTGCCG-GAACCGG TTC CCGGACCACGGC-ACCGG CACCAGCAGCGGCGT SCO6167 6769408 - 6770778 + | proline rich protein membrane protein SCO6168 6771589 - 6770801 - | hypothetical protein SCO6169 6773470 - 6771761 - | regulatory protein SCO6170 6773787 - 6774677 + | oxidoreductase subunit SCO6171 6774677 - 6775267 + | oxidoreductase SCO6172 6775270 - 6777756 + | oxidoreductase TERM 2198 6777978 - 6777939 - g 76 -19.2 -2.62983 | opp_overlap 6777936 6777934 6777968 6777971, overlap 6777949 TGGAGCCCGAGATCA CCGCCGAAGACGCGGGCG CGGG CTCCCGCGTCCCGGGCGG ACGGTCTTGGCTCGA SCO6173 6777908 - 6779365 + | permease SC6C509 SCO6174 6779417 - 6780604 + | hypothetical protein SCO6175 6780609 - 6781592 + | hypothetical protein SCO6176 6782431 - 6781601 - | hypothetical protein SCO6177 6783008 - 6782568 - | hypothetical protein TERM 2199 6782926 - 6782983 + g 86 -22.7 -2.52464 | AGCGGCACGGTGTCG CCGTGCCGCTCCCACCGGGTGAGGC GGCGCCAG GCCTCGTCCGGGGTGAGCGGAACGG TGCGTTCGAGCGAGA SCO6178 6783811 - 6783029 - | deacetylase (secreted protein) TERM 2200 6783766 - 6783822 + g 70 -2 -4.35461 | TGCAGCCGCTCAGCG CGAGGGTCAGCGAGGCGGCGGC-CGCGA AGG TCGCGAGCACACGCAAC-CTGGTCCCCG TTTTCGTCGTCTTCC SCO6179 6783983 - 6784975 + | nucleotide-sugar dehydratase SCO6180 6785096 - 6786736 + | transferase TERM 2201 6787003 - 6786953 - g 86 -21.9 -2.52543 | overlap 6787001 ACCTGCGCGAACGCA CGGTGGTGCTGCGCAGCGG-GGGCC GCG GGCCCGCCGCCGCCC-GCAACACCG GGGCCCGCGCGGTCA SCO6181 6786733 - 6787767 + | transferase SCO6182 6787764 - 6788621 + | dehydratase SCO6183 6788618 - 6789625 + | transferase SCO6184 6789622 - 6790572 + | transferase SCO6185 6790569 - 6791789 + | transferase SCO6186 6791786 - 6792481 + | phosphoheptose isomerase TERM 2202 6792928 - 6792970 + G 73 -17.5 -2.62184 | GACTACGGCCGCGGC GCGGCGGACGCCCTGCGCG ACGTG CTCGCCGCGCGCCCGCCGC TGGTCTGGGACCCGC SCO6187 6792478 - 6793869 + | bifunctional synthase/transferase TERM 2203 6794296 - 6794244 - g 73 -11 -3.85698 | gap 1, overlap 6794245 GGGCCGGTCCACAAA GCGCCGGTCCGGGCGGCACGCGGCG GGAT CGTCG-GTGCCGGGCGGCGCGGCGG GGACCGGGCCGTCGT TERM 2204 6794639 - 6794677 + G 95 -22.4 -3.28712 | CGGGCTCGGGGACCT GCTGGCCGCAGTGCCCGC CCT GCGGGCGTTGCGGCGGGC TTATCCCGGGCACGA SCO6188 6793866 - 6795566 + | transferase TERM 2205 6795637 - 6795605 - g 71 -7.5 -4.13945 | overlap 6795606 ACGGTCACCCCAAAA CGGCGCCACCCCGAC TCC ACCGGAGCGGCCCCC GTCGGCATCGTCATC SCO6189 6795563 - 6796516 + | transferase SCO6190 6796513 - 6797409 + | transferase SCO6191 6798373 - 6797459 - | hypothetical protein SCO6192 6798812 - 6799918 + | hypothetical protein TERM 2206 6799924 - 6799970 + T 75 -15.6 -3.01712 | ACGGGACTGACATGG AGAGGGGGCGCTGCGGGCCGCT CGT GGAGGCCCGCAACGCCCCCCGG TCTTGCACCCGAGGG TERM 2207 6800093 - 6800116 + T 75 -13.9 -3.53012 | opp_overlap 6800111 GCGTGGGGGGTTTGA CGGGGGTCT CGGGAC AGACCCCCG TTTGCCCGGGCGAGC SCO6193 6803072 - 6800241 - | transcriptional regulator SCO6194 6804071 - 6803232 - | response regulator SCO6195 6804196 - 6805872 + | acetyl-coenzyme A synthetase SCO6196 6805869 - 6807494 + | acyl-CoA synthetase TERM 2208 6807650 - 6807617 - T 93 -21 -3.01712 | GGGTTGCCCGCAACA CGCCGGCCGGTGCG GCGAGG CGCACCGGCCGGGG GAGGGGCCGACGATG SCO6197 6808222 - 6807680 - | secreted protein TERM 2209 6808370 - 6808385 + H 79 -6 -4.67982 | GGGTGGGAGTCACTT GGTGCG ATGT CGCCCC TTTTGTTCGCTGACG TERM 2210 6809138 - 6809194 + G 95 -18 -3.85698 | gap 2, overlap 6809141 GCCCTCTCCGGCCGG GGCATGGCCACGGCCTCCGCGGCGGC ACTGGAG GCCGGCGAGGAGGCCGTCGCC--GCC TTTCTGGACGGCGGG TERM 2211 6809141 - 6809193 + G 79 -18.3 -2.91276 | overlap 6809138 CTCTCCGGCCGGGGC ATGGCCACGGCCTCCGCGGCGGC ACTGGAG GCCGGCGAGGAGGCCGTCGCCGC CTTTCTGGACGGCGG TERM 2212 6810260 - 6810207 - g 85 -20.1 -3.01791 | AGTCGTTGGCGAACA CGGCGGCGAGCGCGGCGGCCGCC GCCCGGAA GGCGGCCGACTCGGCCGCCGCCC ACGCCGAGAAGGCGG TERM 2213 6811378 - 6811342 - g 72 -12.2 -3.61894 | overlap 6811371 AATGTGGGCGAACAA GGCGAAGGCTTCGGCC GACAA GGCCAACACCTACGCC ACCGAGGCCGACACG SCO6198 6808799 - 6812269 + | secreted protein TERM 2214 6812356 - 6812298 - f 86 -19.7 -2.83403 | gap 1, overlap 6812297 6812354 TTTTCTCCATGAAAC CCGCGTAATCGCCGAGACCTCATGAGCG CCCA CGCTCATGAGGTCTCGGCT-CGAAACGG GACGCCGGTCGTCGT SCO6199 6812417 - 6814648 + | secreted esterase SCO6200 6815349 - 6814657 - | hypothetical protein SCO6201 6815497 - 6817281 + | glyoxylate carboligase TERM 2215 6817299 - 6817346 + T 95 -25.6 -2.87564 | overlap 6817292 GACCCGGCGTCAAGG GCCGAGAGCGGCCCGTCCCTCT CCTC GGGGGGACGGGCCGCTCTCACC TGTGTACGCGCCTCA SCO6202 6818094 - 6817450 - | hypothetical protein SCO6203 6818500 - 6818162 - | hypothetical protein TERM 2216 6818516 - 6818467 - G 100 -36.6 -3.30124 | opp_overlap 6818465, overlap 6818452 6818468 CCGCACCCGGTAGAA CGCCGGGCAGCGCCGGATGCGG GACCGT CCGCATCCGGCGCTGCCCGGCC GGTGAAGGTTCTCGG TERM 2217 6818515 - 6818468 - G 100 -40.1 -2.57931 | opp_overlap 6818465, overlap 6818452 6818467 CGCACCCGGTAGAAC GCCGGGCAGCGCCGGATGCGG GACCGT CCGCATCCGGCGCTGCCCGGC CGGTGAAGGTTCTCG SCO6204 6820326 - 6818863 - | catalase SCO6205 6821421 - 6820531 - | dehydrogenase TERM 2218 6821299 - 6821267 - G 82 -18.4 -3.05384 | gap 1, opp_overlap 6821263 6821260 GCCTCGGCGATCGAA CCGGCCACGCCGCCG CCGG CGGCGGCGAGG-CGG TCCAGCTTCTCCTGC SCO6206 6822308 - 6821469 - | oxidoreductase SCO6207 6822463 - 6822717 + | hypothetical protein SCO6208 6822714 - 6823082 + | DNA-binding protein TERM 2219 6823108 - 6823134 + F 100 -23 -4.36914 | TCCTTCGCGTCGCCA GCCGCCGTCCGG TCA CCGGGCGGCGGC TTTTCTGACCCCGAA SCO6209 6823172 - 6823747 + | putative OHCU decarboxylase SCO6210 6823744 - 6824145 + | hypothetical protein SCO6211 6824153 - 6825088 + | uricase SCO6212 6825153 - 6826568 + | permease SCO6213 6826642 - 6828039 + | hydroxydechloroatrazine ethylaminohydrolase TERM 2220 6828120 - 6828073 - f 72 -12.8 -3.45788 | gap 2, overlap 6828071 CCGCACAACACAACA CCACTTGATCTCCGGCCGGGAG GGACGG CTCCCGGCCGGTAACC--GTGG ACCCGAGCGGGGTCC SCO6214 6828295 - 6829683 + | permease SCO6215 6830017 - 6830142 + | hypothetical protein SCO6216 6830580 - 6830158 - | hypothetical protein SCO6217 6831287 - 6830637 - | hypothetical protein SCO6218 6831945 - 6831346 - | phosphatase SCO6219 6832135 - 6835920 + | serine/threonine protein kinase SCO6220 6836057 - 6842608 + | hypothetical protein TERM 2221 6842672 - 6842630 - f 100 -27.1 -2.87132 | gap 1, opp_overlap 6842630 CGCGTCCGTGACAGA CGCCCGGTGGTCCGGGGCGG CCCG CCGCCCCGGACCACCGC-CG TATCCTGCACCCTTC TERM 2222 6842630 - 6842672 + F 100 -27.1 -2.79133 | gap 1, opp_overlap 6842630 CGCGTCCGTGACAGA CGCCCGGTGGTCCGGGGCGG CCCG CCGCCCCGGACCACCGC-CG TATCCTGCACCCTTC TERM 2223 6842916 - 6842957 + G 75 -13 -3.61398 | TCGGGCAAGCTTGCC GGCACCGGCTGCC-CCGGTG GGGA CACCGGCGGCGACTGG-GCC TTCTTCGCCGACGAC SCO6221 6842700 - 6843161 + | lipoprotein SCO6222 6844380 - 6843172 - | aminotransferase AlaT SCO6223 6844468 - 6845118 + | hypothetical protein TERM 2224 6845166 - 6845133 - T 86 -18.1 -3.34787 | overlap 6845136 6845138 AACAGGAGGGGACAA CGACAGGAGGCCCGC CGGA GCGGGCCTCCTGAGG ACGCGTCAGGCGCCC TERM 2225 6845163 - 6845136 - T 90 -22.8 -2.84 | overlap 6845133 6845138 AGGAGGGGACAACGA CAGGAGGCCCGC CGGA GCGGGCCTCCTG AGGACGCGTCAGGCG TERM 2226 6845161 - 6845138 - T 84 -19.6 -2.9675 | overlap 6845136 6845133 GAGGGGACAACGACA GGAGGCCCGC CGGA GCGGGCCTCC TGAGGACGCGTCAGG SCO6224 6845987 - 6845172 - | secreted protein SCO6225 6847252 - 6845987 - | secreted protein SCO6226 6848841 - 6847315 - | hypothetical protein TERM 2227 6848762 - 6848733 - G 70 -17.1 -2.62735 | gap 1 ACAGCCGCGACAGCA CGGCCGCGCGGGCC CCT GGC-CGCTCGGCCG CGAACCGGGCGATCA SCO6227 6848969 - 6850522 + | hypothetical protein SCO6228 6850590 - 6851204 + | hypothetical protein SCO6229 6852093 - 6851212 - | sugar transport system permease protein TERM 2228 6852035 - 6852060 + g 74 -16.1 -3.14132 | GTGCTGATGCGCGGA CGGCTGCGCGG ACGG CTGCGCGGCCG TTCCTGCGGGCGGAC SCO6230 6853064 - 6852090 - | sugar transport system permease protein SCO6231 6854429 - 6853107 - | sugar transport system sugar-binding lipoprotein TERM 2229 6855577 - 6855526 - g 93 -19.4 -3.61398 | gap 1, overlap 6855527 GCGCTCGTCGAAGAA GCCGCCGGT-CCCGGTGGCGAAGAG CGC CCCCTCGACACCTGGCACCGGCGGA TCGGCTTCCGGACCG TERM 2230 6855576 - 6855527 - g 87 -22.9 -2.76696 | gap 1, overlap 6855526 CGCTCGTCGAAGAAG CCGCCGGT-CCCGGTGGCGAAGAG CGC CCCCTCGACACCTGGCACCGGCGG ATCGGCTTCCGGACC SCO6232 6854701 - 6857163 + | beta-mannosidase SCO6233 6857160 - 6858188 + | transcriptional regulator TERM 2231 6858206 - 6858236 + F 100 -21.2 -4.72272 | overlap 6858175 GCGGAACGGCCACCG GGAGGGGCGCGGCA TCA TGTCGCGCCCCTTC TTTTTGCTAAACCGC SCO6234 6858440 - 6859594 + | secreted beta-mannosidase TERM 2232 6859610 - 6859639 + T 91 -18.5 -3.59979 | CCCGACCGACGGCGA CGCCCCACCCTGG GGTT CCGGGGCGGGGCG TTTCCAGTGGGCGGC SCO6235 6859903 - 6859658 - | hypothetical protein SCO6236 6860775 - 6859900 - | DNA-binding protein SCO6237 6860882 - 6861364 + | regulatory protein SCO6238 6861417 - 6862082 + | hypothetical protein SCO6239 6863275 - 6862307 - | sigma factor SCO6240 6864092 - 6863358 - | hypothetical protein SCO6241 6864326 - 6864658 + | hypothetical protein SCO6242 6864755 - 6865669 + | hypothetical protein TERM 2233 6865718 - 6865674 - T 100 -32.2 -2.87211 | ACCTCGGCTGACACA CGCCCGCGCCCCCGGTGCCG TGCTG CGGCACCGGGGGCGCGGACC AGGGAGCGTGTGCGG SCO6243 6867358 - 6865736 - | malate synthase SCO6244 6868166 - 6867543 - | hypothetical protein SCO6245 6868320 - 6868634 + | hypothetical protein SCO6246 6869469 - 6868657 - | transcriptional regulator for glyoxylate bypass SCO6247 6869725 - 6871062 + | allantoinase SCO6248 6871127 - 6872257 + | allantoicase SCO6249 6873105 - 6872329 - | 3-oxoacyl-[acyl-carrier-protein] reductase SCO6250 6873167 - 6873760 + | transport protein SCO6251 6873849 - 6874406 + | reductase SCO6252 6874904 - 6874704 - | hypothetical protein TERM 2234 6874985 - 6875019 + H 70 -9.8 -3.73224 | opp_overlap 6874972 6875003 AAGGCTTCTTCGCGC GTCGGCCGCGCGCCGA AAG TCGCCGCCCGTGCGAC TTTGGTCGACGGTCC SCO6253 6875083 - 6876336 + | two-component sensor kinase SCO6254 6876381 - 6877070 + | two-component system response regulator SCO6255 6878175 - 6877162 - | dehydrogenase SCO6256 6878304 - 6879041 + | transcriptional regulator SCO6257 6879297 - 6880301 + | ABC transport system sugar binding lipoprotein SCO6258 6880298 - 6881338 + | sugar ABC transporter permease protein SCO6259 6881335 - 6882126 + | sugar ABC transporter ATP-binding protein SCO6260 6882242 - 6883390 + | sugar kinase SCO6261 6883459 - 6883968 + | hypothetical protein SCO6262 6884138 - 6887071 + | helicase SCO6263 6887068 - 6889461 + | hypothetical protein SCO6264 6889624 - 6890412 + | reductase SCO6265 6891175 - 6890528 - | gamma-butyrolactone binding protein TERM 2235 6891455 - 6891427 - g 74 -16 -3.12668 | opp_overlap 6891415 CAGCTGGATACCGAA GGGCGGTGACCG GTTCT CGGTCACCGCCG TCCTGCCCCACGACC SCO6266 6891293 - 6892237 + | ScbA protein SCO6267 6892353 - 6893207 + | hypothetical protein SCO6268 6894022 - 6893258 - | histidine kinase SCO6269 6895200 - 6894148 - | 2-oxoglutarate ferredoxin oxidoreductase subunit beta SCO6270 6897085 - 6895193 - | oxidoreductase alpha-subunit TERM 2236 6896293 - 6896273 - G 80 -3.2 -4.63928 | gap 1, overlap 6896275 6896276 ATAGGAGCCCAAAAA CAGCG-GCA GGTC CGCGCGCCG GGACGCGGCGATCAG SCO6271 6898861 - 6897089 - | acyl-CoA carboxylase complex A subunit TERM 2237 6899261 - 6899203 - g 71 -10.2 -3.82097 | gap 4, overlap 6899204 CGGAAACTCATGAAA GGCGCCG-CGGTGTCCGGCGGCGCGCTGGC GCT GCCCGCGCTCGGC-G--CACCGCCGGCGAC GGCCGCGCCCGCCGC SCO6272 6899170 - 6900822 + | secreted FAD-binding protein TERM 2238 6900853 - 6900881 + T 100 -28.9 -3.60627 | opp_overlap 6900853 CAGCCGTGGAAAGAA GCCCCCGCCGGCC TCG GGCCGGCGGGGGC TTTCGCGTGCGGTGG TERM 2239 6900881 - 6900853 - T 100 -28.9 -3.9122 | opp_overlap 6900853 CAGCCGTGGAAAGAA GCCCCCGCCGGCC TCG GGCCGGCGGGGGC TTTCGCGTGCGGTGG SCO6273 6907356 - 6900898 - | type I polyketide synthase SCO6274 6918143 - 6907413 - | type I polyketide synthase SCO6275 6931959 - 6918286 - | type I polyketide synthase TERM 2240 6931766 - 6931732 - G 71 -14.8 -3.15249 | GACACCGTCCAGGAA CGCCCCGCGCCGGCCC CCG GAGCCCGAGCCGGGCG CCGCGTCCGCGGGCA TERM 2241 6932310 - 6932296 - g 84 -9.2 -4.35483 | opp_overlap 6932303 CGCTATGAGAAGAAA GCGCGA AGG CCGCGC GATAGTGCTCGGCGG TERM 2242 6932303 - 6932339 + G 70 -2.2 -4.3739 | gap 2, opp_overlap 6932296, overlap 6932328 6932334 AGAAGAAAGCGCGAA GGCCGCGCGATAGTGCTC GGC GGGAGC-ATGGCG-GGCC TTTTCTCCGCCCGTG SCO6276 6932285 - 6933607 + | secreted protein SCO6277 6933604 - 6934464 + | epoxide hydrolase SCO6278 6934507 - 6936138 + | integral membrane transport protein TERM 2243 6936170 - 6936190 + G 71 -8.1 -3.96624 | opp_overlap 6936153 6936170 GACCAGCCGACCACA CGGGACGGC TTC GCCGAGCCG TTTCTGCTGGAGGTG TERM 2244 6936734 - 6936700 - g 88 -20.8 -3.14132 | opp_overlap 6936707, overlap 6936707 CGTCCGGCGCAGGAA CGAGGAACAGCTGGCC CGC GGCCCGCTGTTCCTCA CCCCGGAAGGCGCCT SCO6279 6936149 - 6937705 + | diaminobutyrate-pyruvate aminotransferase TERM 2245 6937819 - 6937871 + F 77 -10.5 -4.09685 | overlap 6937820 6937824 6937826 6937848 CCGCCTCAGGGTCAC CGACGCTCCGGAGGGCCTGGG CAATCCCCCGT CCCAGGCCCTCCGGTCTCTTG TTTTGCCAGGTGAGC TERM 2246 6937820 - 6937868 + F 84 -10.4 -4.17762 | gap 2, overlap 6937819 6937824 6937826 6937848 CGCCTCAGGGTCACC GACGCTCCGGAGGGCCTGGG CAATCCCCCGT CCCAGGCCCTCCGGT-C-TC TTGTTTTGCCAGGTG TERM 2247 6937824 - 6937866 + F 75 -13.4 -3.68435 | overlap 6937820 6937819 6937826 6937848 TCAGGGTCACCGACG CTCCGGAGGGCCTGGG CAATCCCCCGT CCCAGGCCCTCCGGTC TCTTGTTTTGCCAGG TERM 2248 6937826 - 6937864 + F 91 -20.4 -3.41798 | overlap 6937824 6937820 6937819 6937848 AGGGTCACCGACGCT CCGGAGGGCCTGGG CAATCCCCCGT CCCAGGCCCTCCGG TCTCTTGTTTTGCCA SCO6280 6938012 - 6939643 + | regulatory protein SCO6281 6939907 - 6941544 + | FAD-binding protein TERM 2249 6941566 - 6941608 + T 80 -18.3 -2.89564 | CCGCACCCCGCCGAG CGGCCTCCGCAAGCCCGGG GGCCG CTCGGGCGTGCGGTGTCCG TCTCTCCGGTGGAAC TERM 2250 6941713 - 6941666 - T 93 -18.6 -4.0162 | gap 1, opp_overlap 6941669, overlap 6941669 GCCGGACACGACAAA GAACGCCGCCCTCGTCCTCTG TGTGCGG CAG-GGAGAAGGGCGGCGTTC TTCCGGGCGGGCGGC TERM 2251 6941669 - 6941710 + T 75 -13 -3.61398 | gap 1, opp_overlap 6941666 6941669 GGACACGACAAAGAA CGCCGCCCTCGTCCTCTGT GTGCG GCAG-GGAGAAGGGCGGCG TTCTTCCGGGCGGGC TERM 2252 6941710 - 6941669 - T 86 -14.5 -4.1337 | gap 1, opp_overlap 6941669, overlap 6941666 GGACACGACAAAGAA CGCCGCCCTCGTCCTCTG TGTGCGG CAG-GGAGAAGGGCGGCG TTCTTCCGGGCGGGC SCO6282 6942543 - 6941746 - | 3-oxoacyl-[acyl-carrier protein] reductase SCO6283 6942661 - 6943506 + | hypothetical protein SCO6284 6943673 - 6945265 + | decarboxylase SCO6285 6945280 - 6945543 + | hypothetical protein TERM 2253 6945593 - 6945547 - T 86 -19.5 -3.14463 | gap 2 AACGCGGCGTAGCAA CGTGC-GGTGGCCCGGA-CCCCG GAG CGGGGTTCCGGGCCACGAGCAGG CGCGGAGGGCCGGGT SCO6286 6946379 - 6945705 - | regulatory protein SCO6287 6946617 - 6947423 + | thioesterase II SCO6288 6947584 - 6948414 + | regulatory protein SCO6289 6948589 - 6949758 + | secreted oxidoreductase SCO6290 6949755 - 6950009 + | hypothetical protein SCO6291 6950002 - 6951537 + | secreted oxidase SCO6292 6951534 - 6952430 + | dihydropicolinate synthase SCO6293 6952433 - 6953434 + | hypothetical protein SCO6294 6954470 - 6953679 - | GntR family regulatory protein SCO6296 6957022 - 6956543 - | hypothetical protein SCO6295 6954616 - 6956604 + | ABC transporter ATP-binding protein SCO6297 6957975 - 6957019 - | 3-hydroxyacyl-CoA dehydrogenase SCO6298 6958898 - 6957972 - | hypothetical protein SCO6299 6959844 - 6958987 - | TetR family transcriptional regulator TERM 2254 6959343 - 6959390 + g 89 -23.4 -2.83164 | gap 1 TGAGCTGGGACAGCT CCGC-CGCCGCGTCGTCCGCCTC GGC GAGACGGGCGGCACGGCGCGCGG TGTCCTCGTCCATGC TERM 2255 6959753 - 6959809 + g 71 -15.1 -3.05384 | gap 2, overlap 6959796 CGGCGCGCGAACTCG CGCTGA--CTGACACCCGCGGCCGCGA TGACC TCGCGGACGCGGGCGGCGGTGTCGGCG TTCGGTGCGCCGCCG SCO6300 6961810 - 6959963 - | secreted hydrolase SCO6301 6962080 - 6961931 - | hypothetical protein TERM 2256 6962061 - 6962036 - G 74 -16.9 -3.15544 | GGGCAGGCCCATGAA CCCGCACAGCA GGCG TGCCGTGCGGG GGTGGCGCGCGCCGA SCO6302 6962111 - 6962281 + | hypothetical protein SCO6303 6963320 - 6962349 - | hydroxylase SCO6304 6964300 - 6963368 - | oxidoreductase SCO6305 6965349 - 6964306 - | hypothetical protein TERM 2257 6964947 - 6964999 + g 70 -16.9 -2.70932 | gap 1 GCTGGAGGGGGACCA GGCCGAGTCCGCGCAGCCGCTCGG GGGCGG CCGAACAG-TGCGCGGCCACGGCC TCGTTGGCGAGCCGG SCO6306 6966485 - 6965355 - | hypothetical protein SCO6307 6967474 - 6966512 - | cyclase SCIF309c SCO6308 6968472 - 6967471 - | hydrolase SCO6309 6968600 - 6969571 + | LysR family transcriptional regulator SCO6310 6970033 - 6971376 + | cytochrome P450 SCO6311 6971557 - 6971979 + | integral membrane protein SCO6312 6972675 - 6972028 - | transcriptional regulator TERM 2258 6972933 - 6972890 - R 76 -15.9 -3.16564 | opp_overlap 6972893 6972896, overlap 6972893 CCTCGATGCCATGAA CGACCCGGCGGCTGGGCCC TCGTGT GGACCCAGCCGCCTCGTCT CCTCGCAGGTCGGCT TERM 2259 6972930 - 6972893 - R 72 -16.2 -2.78547 | opp_overlap 6972893 6972896, overlap 6972890 CGATGCCATGAACGA CCCGGCGGCTGGGCCC TCGTGT GGACCCAGCCGCCTCG TCTCCTCGCAGGTCG TERM 2260 6972896 - 6972927 + r 82 -18.7 -2.66316 | opp_overlap 6972893 6972890, overlap 6972893 TGCCATGAACGACCC GGCGGCTGGGCCC TCGTGT GGACCCAGCCGCC TCGTCTCCTCGCAGG SCO6313 6974066 - 6972975 - | integral membrane protein SCO6316 6975153 - 6975046 - | hypothetical protein SCO6317 6975194 - 6975283 + | hypothetical protein SCO6318 6976440 - 6975868 - | hypothetical protein SCO6319 6976852 - 6977634 + | lipoprotein SCO6320 6979466 - 6977697 - | transport integral membrane protein SCO6321 6980436 - 6981524 + | integral membrane protein SCO6323 6983887 - 6983231 - | TetR family transcriptional regulator SCO6324 6984273 - 6984983 + | hydrolase SCO6325 6986764 - 6985856 - | hypothetical protein SCO6326 6987242 - 6986787 - | integral membrane protein SCO6327 6987738 - 6987274 - | integral membrane protein TERM 2261 6987557 - 6987543 - G 73 -4.9 -4.3586 | overlap 6987544 6987554 TCACGTAGACGAAAA CGCCC AGGAA GGGCA GGAGGATGCAGAACA SCO6328 6988172 - 6987864 - | hypothetical protein TERM 2262 6988259 - 6988285 + H 80 -17.2 -3.18912 | overlap 6988260 TGGCTCCCCTGTGGA TCGGGCGGCCGC TGC GGGGCCGCCCGG TTGGTCGGTCGGTGA TERM 2263 6988260 - 6988284 + H 78 -18.5 -2.51133 | overlap 6988259 GGCTCCCCTGTGGAT CGGGCGGCCGC TGC GGGGCCGCCCG GTTGGTCGGTCGGTG SCO6329 6988370 - 6988459 + | hypothetical protein SCO6330 6988456 - 6989079 + | hypothetical protein SCO6331 6989076 - 6990485 + | hypothetical protein SCO6332 6990734 - 6990537 - | hypothetical protein SCO6333 6991409 - 6990876 - | integral membrane protein SCO6334 6994433 - 6991755 - | transcriptional regulator TERM 2264 6992451 - 6992479 + g 74 -13.8 -3.53811 | gap 1, opp_overlap 6992435 CGCCGTGGACACGGC CGG-CTCCGCCGC CTTG GCGGCGGCGTCCG TTTCACCGACGTCGA SCO6335 6995353 - 6994439 - | hypothetical protein SCO6337 6997380 - 6996448 - | transposase SCO6336 6995390 - 6996544 + | hypothetical protein SCO6338 6997698 - 6997411 - | transposase SCO6339 6998012 - 6999361 + | 3-oxoadipate enol-lactone hydrolase/4-carboxymuconolactone decarboxylase SCO6340 6999405 - 7000040 + | hypothetical protein SCO6341 7000095 - 7000874 + | exonuclease SCO6342 7000969 - 7001376 + | hypothetical protein SCO6343 7001411 - 7001539 + | hypothetical protein SCO6344 7003223 - 7001616 - | secreted amidase SCO6345 7003454 - 7004212 + | secreted chitinase TERM 2265 7004768 - 7004744 - g 71 -14.9 -3.06796 | GCGCACCGGACGGAA CGGACCCCCGG CCG CCGGGGCCCCG AACGGGATGCGGGTG SCO6346 7004372 - 7004848 + | hypothetical protein SCO6347 7004952 - 7006739 + | beta-galactosidase TERM 2266 7006756 - 7006802 + T 100 -30.8 -2.87211 | GCCCCGGGCCAACGG CGGCCGGGTGCGGCCCGCCCCC GAG GAGGGCGAGCCGCACCCGGCCA TGTCTCAGCGGGCGT SCO6348 7010892 - 7006807 - | hypothetical protein TERM 2267 7011048 - 7011065 + H 82 -14.1 -3.78934 | GTCCATTACCTGCGA CGGCGGC CGGA GCCGCCG TTCTTGTGGAGAGGC TERM 2268 7011136 - 7011099 - g 72 -11.9 -3.60627 | gap 1 CGATGTCATCGGAAA CG-CCGGCCGCCGACGGG GCG CCCGTGAGCAGGCGGACG GCCGACGACGGTGCC SCO6349 7011086 - 7012171 + | transcriptional regulator SCO6350 7012788 - 7012204 - | hypothetical protein SCO6351 7012868 - 7013566 + | hypothetical protein SCO6352 7014034 - 7013618 - | hypothetical protein SCO6353 7016286 - 7014907 - | two-component sensor TERM 2269 7014980 - 7015028 + g 79 -18.8 -2.91264 | gap 2 GTCATCTCGCCTCCG GCGGAGCGGGCCAGGCGTCGCGCC AGC GGCA-GTC-CCAGGCCCGCTCCGC TGTGTCCGTCGCCGG SCO6354 7016897 - 7016283 - | two-component regulator SCO6355 7017717 - 7016899 - | integral membrane protein SCO6356 7018319 - 7017714 - | integral membrane protein SCO6357 7019002 - 7018316 - | hypothetical protein SCO6358 7019120 - 7019509 + | hypothetical protein SCO6359 7019506 - 7020435 + | integral membrane protein SCO6360 7020934 - 7021872 + | ABC transporter ATP-binding protein SCO6361 7021869 - 7022708 + | integral membrane protein TERM 2270 7023197 - 7023233 + G 74 -12.2 -3.75024 | gap 1, overlap 7023199 GCTGCTGGTCGCGGT CCGCGCGTCCTCGGCCG TGTC CGTCTG-GGACGCGCTG TTCTTCCTGCTGAGC TERM 2271 7023199 - 7023231 + G 71 -13.4 -3.45742 | gap 1, overlap 7023197 TGCTGGTCGCGGTCC GCGCGTCCTCGGCCG TGTC CGTCTG-GGACGCGC TGTTCTTCCTGCTGA SCO6362 7022727 - 7024016 + | two-component sensor SCO6363 7024013 - 7024681 + | two-component regulator SCO6364 7025536 - 7024745 - | two-component regulator SCO6365 7028168 - 7025526 - | integral membrane protein SCO6366 7028854 - 7028165 - | ABC transporter ATP-binding protein SCO6367 7029578 - 7028841 - | ABC transporter ATP-binding protein SCO6368 7030195 - 7029575 - | lipoprotein SCO6369 7030354 - 7031664 + | two-component sensor SCO6370 7032706 - 7031672 - | integral membrane protein TERM 2272 7031801 - 7031822 + g 71 -10.1 -3.71848 | overlap 7031785 CAGGGACGCGGTGAT CAGCACCGC GCTC GCGCTGCTG TTGTTCATGCCGCAG SCO6371 7032798 - 7033637 + | integral membrane protein SCO6372 7033729 - 7033962 + | very hypotheticl protein SC4A208 SCO6373 7035663 - 7034266 - | integral membrane protein SCO6374 7037224 - 7035788 - | sugar transferase TERM 2273 7036693 - 7036681 - G 90 -4.1 -5.1675 | opp_overlap 7036686 CGATCCAGGAAAAAA TTCCC TTG GAGAA CCGATTGGTCTCAGG TERM 2274 7037304 - 7037327 + r 74 -7.4 -4.17556 | overlap 7037285 7037305 GCTGGTCCAGACAGG GGTTGAGTGC CATG GCGCTCAACA TTTATTCCACCTGTC TERM 2275 7037655 - 7037688 + r 85 -19.6 -3.11218 | overlap 7037647 7037684 TAGGGCCTCATTGGT CGCGCCACCGTCGG CTAGAT CCCACGGTGGCGCG TCTTCCGCTCTTTGA SCO6375 7038399 - 7037737 - | secreted protein TERM 2276 7038022 - 7038036 + g 74 -7.8 -4.1552 | overlap 7038030 7038033 GAGGAGCGCGTCCTT CTTGGC GGT GCCGAG TTTGTTGAACGCGTC TERM 2277 7039337 - 7039362 + G 71 -3.9 -4.35483 | ATCCCGCTCTCTATG CTGTGCTGCTT GGGG GAGCAGCGGGG TTTCTTCTGCTGACC TERM 2278 7039450 - 7039436 - g 71 -12.8 -3.53012 | opp_overlap 7039427 TGGTCCTGTTCGAAA CGGCGG GGC CCGCCG TGGTAGGCATTCTGT SCO6376 7038757 - 7039656 + | integral membrane protein SCO6377 7041054 - 7039699 - | lipoprotein TERM 2279 7039848 - 7039876 + g 74 -13.8 -3.53091 | ACTGCTGGTTCGGGC GGCCAGGCTCGC ACCGC GTGAGCCCGGCC TTTCGAGCGAGCGCT SCO6378 7041910 - 7041611 - | hypothetical protein SCO6379 7042737 - 7042054 - | hypothetical protein TERM 2280 7042979 - 7042927 - R 85 -17 -3.53012 | gap 1 CCGCCGGTGCGCAAA GGGCGTCGTGGACCGCG-AGCGACA CGGT CGCGGCTACGCGGTGCAGGACGCCC CCGGGCTGTCAGCCC SCO6380 7043440 - 7043084 - | hypothetical protein SCO6381 7045067 - 7043724 - | lipoprotein TERM 2281 7044711 - 7044664 - G 72 -11.3 -3.59979 | gap 3, overlap 7044665 7044668 GTGGCTGAGGCGAAA GGCAGTCGTCCCGTCCCGG-GGGC GGT GCCCGCCGGGACGGG--GACCGGG GTGGTGGATGCGAGC TERM 2282 7044707 - 7044668 - G 73 -17.3 -2.65354 | gap 3, overlap 7044665 7044664 CTGAGGCGAAAGGCA GTCGTCCCGTCCCGG-GGGC GGT GCCCGCCGGGACGGG--GAC CGGGGTGGTGGATGC SCO6382 7046618 - 7047526 + | secreted protein SCO6383 7049126 - 7048443 - | integral membrane protein SCO6384 7051151 - 7049382 - | integral membrane lysyl-tRNA synthetase SCO6385 7053460 - 7051526 - | integral membrane protein SCO6386 7053632 - 7054015 + | hypothetical protein TERM 2283 7054512 - 7054481 - g 71 -15.8 -3.14344 | CACTGGCTCGAGCAA CTGTCCGACGCCGG CCTC CCGGCGTTGGCCAG CCTGGCCAACGCCAT TERM 2284 7054611 - 7054655 + G 79 -18.4 -2.88663 | overlap 7054628 TGGCACTCACCTTGC CGGCTGCCCGGCGGCCCGGC GGGCA GTCGGGCAGTCGGGCTGACG TCTGTCCACCTGCGT SCO6387 7054118 - 7054684 + | hypothetical protein TERM 2285 7054714 - 7054736 + T 70 -13.4 -3.32844 | CGCCCCGCGCCGGCT CGGTGCCGTC CCG GACCGCACCG TTCTCCCCTGAGCGC SCO6388 7055324 - 7054965 - | hypothetical protein SCO6389 7055713 - 7055321 - | hypothetical protein SCO6390 7056189 - 7057292 + | integral membrane protein TERM 2286 7057538 - 7057550 + F 75 -10.5 -3.95435 | GGCGATGTAGGAGGT CGGGG GAT CCCCG TTATGTTTTCCGCGG SCO6391 7057809 - 7059026 + | IS110 transposase/integrase SCO6392 7060243 - 7059104 - | transposase SCO6393 7060375 - 7061838 + | transposase SCO6394 7061835 - 7062605 + | IS element ATP binding protein TERM 2287 7063997 - 7063987 - T 85 -4.6 -5.00616 | overlap 7063993 CGGGTCCCGAAAAAA GGAC AAC GCCC CGGCACCACCGCCCC TERM 2288 7064040 - 7063993 - T 73 -10.6 -3.81575 | gap 3, overlap 7063987 CCGAAAAAAGGACAA CGCCCCGGCACCA-CCG--CCCC GACGA GGGACTCGGACGGTCCCGGGGCG GCCTGACCTGCAAGA TERM 2289 7064348 - 7064291 - T 70 -13.9 -3.17392 | gap 1, overlap 7064294 7064328 GATCCCGGAACCGAA GGA-CCAGCGGGCCAACCGCCGCCGCAG AGG CAGAGAAGGCGGCAGGCCCGCCGGCTTC GACCGGGACCACTAC TERM 2290 7064344 - 7064294 - T 86 -20.2 -2.78712 | overlap 7064291 7064328 CCCGGAACCGAAGGA CCAGCGGGCCAACCGCCGCCGCAG AGG CAGAGAAGGCGGCAGGCCCGCCGG CTTCGACCGGGACCA SCO6399 7065729 - 7065214 - | hypothetical protein SCO6400 7066309 - 7067553 + | IS117 transposase SCO6401 7068132 - 7067605 - | hypothetical protein SCO6402 7067650 - 7068003 + | hypothetical protein SCO6403 7068598 - 7068218 - | hypothetical protein TERM 2291 7068994 - 7068946 - H 70 -12.7 -3.29144 | gap 2, opp_overlap 7068948, overlap 7068948 7068950 7068952 TGATGCGGCGCACAA CATAG--ACCACGATCGCCGGTT AGCCA AACCGGCGATCGTGGTGACCATT GGTGGCGGTCGTGCT TERM 2292 7068989 - 7068948 - H 80 -16.8 -3.21395 | gap 1, opp_overlap 7068948, overlap 7068946 7068950 7068952 ATGCGGCGCACAACA TAGACCACGATCGCCGGTT AGCCA AACCGGCGATCGTGGTG-A CCATTGGTGGCGGTC TERM 2293 7068988 - 7068950 - H 93 -21.9 -3.17146 | opp_overlap 7068948, overlap 7068948 7068946 7068952 GCGGCGCACAACATA GACCACGATCGCCGGTT AGCCA AACCGGCGATCGTGGTG ACCATTGGTGGCGGT TERM 2294 7068986 - 7068952 - H 100 -24.5 -3.14745 | opp_overlap 7068948, overlap 7068950 7068948 7068946 GGCGCACAACATAGA CCACGATCGCCGGTT AGCCA AACCGGCGATCGTGG TGACCATTGGTGGCG SCO6404 7069255 - 7069434 + | hypothetical protein SCO6406 7071791 - 7071396 - | secreted protein SCO6405 7069508 - 7071526 + | DNA recombinase SCO6407 7071944 - 7073755 + | gamma-glutamyltranspeptidase (putative secreted protein) SCO6408 7076284 - 7073756 - | Clp protease ATP binding subunit SCO6409 7077213 - 7076437 - | methionine aminopeptidase SCO6410 7077312 - 7077563 + | DNA-binding protein SCO6411 7077746 - 7078588 + | hydrolase SCO6412 7078585 - 7079868 + | aminotransferase SCO6413 7079908 - 7081521 + | DNA-binding protein SCO6414 7081657 - 7082499 + | hypothetical protein SCO6415 7082535 - 7083938 + | dihydropyrimidinase SCO6416 7083950 - 7084972 + | oxidoreductase TERM 2295 7085011 - 7084977 - f 72 -15.6 -2.72379 | TCAACGCCTGAACCA CCCCGGCCCGCCCC GCACCCG GGGGCGGGCCCCGG GGCGCACCCGCGCAC SCO6417 7085067 - 7086635 + | integral membrane transporter SCO6418 7088364 - 7086736 - | hypothetical protein SCO6419 7089174 - 7088518 - | hypothetical protein SCO6420 7090445 - 7089432 - | DNA-binding protein TERM 2296 7091696 - 7091719 + G 76 -15.2 -3.35679 | GGCGGCACCCTGCGC GCCGCCCCCC GCGC GGAGGGCGGC TTCTCGGTGCGCGCA SCO6421 7090613 - 7091761 + | two-component system sensor kinase SCO6422 7091758 - 7092432 + | two-component system regulatory protein SCO6423 7093617 - 7092451 - | lipoate-protein ligase SCO6424 7094609 - 7093614 - | two-component system sensor protein SCO6425 7094757 - 7095527 + | hypothetical protein SCO6426 7095676 - 7096188 + | hypothetical protein TERM 2297 7096687 - 7096745 + G 72 -13.9 -3.31461 | gap 2, overlap 7096687 7096689 7096691 7096693 CCGGACCCGCGCTGG -CGGGCC-TCGTGGTCGCCTACGCGGGCA ACG TGCCCGCCTACGCCACCACGGTGGTCTGC TTCTGCGCCTCGGTC TERM 2298 7096687 - 7096744 + G 81 -19.9 -2.58663 | gap 1, overlap 7096687 7096689 7096691 7096693 CCGGACCCGCGCTGG CGGGCC-TCGTGGTCGCCTACGCGGGCA ACG TGCCCGCCTACGCCACCACGGTGGTCTG CTTCTGCGCCTCGGT TERM 2299 7096689 - 7096742 + G 79 -18.9 -2.83271 | gap 1, overlap 7096687 7096687 7096691 7096693 GGACCCGCGCTGGCG GGCC-TCGTGGTCGCCTACGCGGGCA ACG TGCCCGCCTACGCCACCACGGTGGTC TGCTTCTGCGCCTCG TERM 2300 7096691 - 7096740 + G 77 -17.9 -2.96452 | gap 1, overlap 7096689 7096687 7096687 7096693 ACCCGCGCTGGCGGG CC-TCGTGGTCGCCTACGCGGGCA ACG TGCCCGCCTACGCCACCACGGTGG TCTGCTTCTGCGCCT TERM 2301 7096693 - 7096737 + G 77 -19.3 -2.71763 | overlap 7096691 7096689 7096687 7096687 CCGCGCTGGCGGGCC TCGTGGTCGCCTACGCGGGCA ACG TGCCCGCCTACGCCACCACGG TGGTCTGCTTCTGCG SCO6427 7096185 - 7097480 + | integral membrane transport protein TERM 2302 7097530 - 7097484 - T 100 -29.5 -3.32963 | ACCCCGACGTGAGAA CGGCGGACCGCCCCGCCACGG ACGTG CCGTGACGGGGCGGTGCACCG AGGTCGGGCCGCGGT SCO6428 7104511 - 7097567 - | secreted protein TERM 2303 7100317 - 7100301 - G 70 -13.7 -3.23216 | CCCGACGACCACGAA CTGCCGG TGA CCGGCAG CGGGACGGTCGCGTA SCO6429 7104902 - 7106290 + | hypothetical protein TERM 2304 7107920 - 7107867 - g 77 -16.8 -3.28712 | gap 3, overlap 7107868 7107914 7107915 CGTGCCGGCCCACAA GCCGCCGGTGTCCGGCGTGCCGGCCCT CGA AGCGCCGGC-CGCCGAA-AC-GCCGGC CCTCGAAGTGCCGTA SCO6430 7106284 - 7108176 + | hypothetical protein SCO6431 7108264 - 7111779 + | peptide synthase SCO6432 7111866 - 7116089 + | peptide synthase SCO6433 7116086 - 7116493 + | hypothetical protein SCO6434 7116513 - 7117874 + | oxidoreductase SCO6435 7117871 - 7118257 + | hypothetical protein SCO6436 7118254 - 7119774 + | tRNA synthetase SCO6437 7119848 - 7121122 + | hypothetical protein SCO6438 7121125 - 7122447 + | diaminopimelate decarboxylase SCO6439 7122904 - 7122416 - | DNA-binding protein SCO6440 7123131 - 7123883 + | hypothetical protein TERM 2305 7124029 - 7124003 - g 71 -15.8 -3.14132 | CGGCGGCCGGAGGAA CTGGACCCGGTC GTC GACCGGGCCCGG GCGGCCTGGCCCGGC SCO6441 7123886 - 7125292 + | aldehyde dehydrogenase SCO6442 7125293 - 7126396 + | alcohol dehydrogenase SCO6443 7126477 - 7127388 + | hypothetical protein SCO6444 7127464 - 7129407 + | gamma-glutamyl transferase SCO6445 7129505 - 7130350 + | inositol monophosphatase SCO6446 7130387 - 7131346 + | hypothetical protein SCO6447 7132141 - 7131401 - | NAD(P)H oxidoreductase SCO6448 7132189 - 7133130 + | AraC-like transcriptional regulator SCO6449 7133229 - 7134647 + | dehydrogenase TERM 2306 7135094 - 7135080 - g 78 -7.8 -4.30576 | overlap 7135081 TGGCGACCACCAAAA CCTCGG TGA CCGAGA TCCGCTTCGTCCTCT SCO6450 7134644 - 7135153 + | hypothetical protein SCO6451 7135277 - 7136905 + | substrate binding protein SCO6452 7136902 - 7137906 + | transport permease protein SCO6453 7137903 - 7138841 + | transport permease protein SCO6454 7138838 - 7139845 + | ABC transporter ATP-binding protein SCO6455 7139838 - 7140506 + | ABC transporter ATP-binding protein SCO6456 7141923 - 7140529 - | hydrolytic protein TERM 2307 7142059 - 7142049 - H 74 -2.4 -4.70887 | opp_overlap 7142049 CCAGGAACAAACAAA CTCC GAC GGGG TAATTGATTCGGTTG TERM 2308 7143541 - 7143527 - g 73 -4.3 -4.371 | TCGAGGACATCAAAA TCATC AAGCG GATGA ACATGAACAGCGTCC SCO6457 7142206 - 7146129 + | beta-galactosidase SCO6458 7146169 - 7147047 + | hypothetical protein SCO6459 7147390 - 7147028 - | regulatory protein SCO6460 7147460 - 7149376 + | cation-transporting ATPase SCO6461 7149468 - 7150940 + | ADA-like regulatory protein SCO6462 7151007 - 7151501 + | methylated-DNA-protein-cysteine methyltransferase SCO6463 7151706 - 7152575 + | hypothetical protein SCO6464 7153332 - 7152607 - | SIR2 family transcriptional regulator SCO6465 7153868 - 7153374 - | hypothetical protein SCO6466 7154053 - 7155195 + | transferase TERM 2309 7155450 - 7155420 - T 100 -26.2 -3.81488 | CGCGCGCAAACAGAA GGGCCCCGAACCCG ACC CGGGTCCGGGGCCC CACCCAGCGGAGCGC SCO6467 7156247 - 7155465 - | phosphatidylserine synthase SCO6468 7156962 - 7156306 - | phosphatidylserine decarboxylase SCO6469 7158338 - 7157133 - | acyl-CoA dehydrogenase TERM 2310 7157622 - 7157599 - G 76 -4.5 -4.58663 | gap 1, overlap 7157600 ATCATTTGGTAAAAA CCTCGGCCGG TGACG CCG-CCGAGC ACCCGATTGGCCGGA TERM 2311 7157799 - 7157812 + g 71 -6.7 -4.09685 | overlap 7157796 GGCCGTGCCCTCCGG GTGAC CCTC GTCAC TTTTCACCAGTACGG SCO6470 7158853 - 7158341 - | hypothetical protein SCO6471 7159878 - 7158859 - | citratelyase SCO6472 7161902 - 7159875 - | coenzyme B12-dependent mutase SCO6473 7163264 - 7161921 - | crotonyl CoA reductase TERM 2312 7163565 - 7163545 - R 100 -18.3 -4.70659 | GCCGACATGCAAAAA CGGCCACCC GGT GGGTGGCCG TCGTCACAGAGTCGA SCO6474 7164418 - 7163600 - | transcriptional regulator SCO6475 7166360 - 7164555 - | oxidoreductase SCO6476 7166743 - 7167336 + | adenylosuccinate lyase SCO6477 7167913 - 7167374 - | hypothetical protein SCO6478 7168308 - 7167910 - | hypothetical protein SCO6479 7169964 - 7168375 - | secreted peptidase SCO6480 7170443 - 7170144 - | hypothetical protein SCO6481 7171563 - 7170517 - | hypothetical protein SCO6482 7171800 - 7172243 + | hypothetical protein SCO6483 7172394 - 7174841 + | efflux protein TERM 2313 7174851 - 7174876 + F 93 -21.9 -3.05844 | overlap 7174853 GACTGAGAGCGGCGA CACCGGCGCGC GGGC GCGCGCCGGTG TGTTCGCGTGCCACC TERM 2314 7174853 - 7174874 + F 85 -18.7 -3.08813 | overlap 7174851 CTGAGAGCGGCGACA CCGGCGCGC GGGC GCGCGCCGG TGTGTTCGCGTGCCA SCO6484 7174911 - 7177493 + | hypothetical protein SCO6485 7177711 - 7178433 + | hypothetical protein SCO6486 7178603 - 7179436 + | transport associated protein SCO6487 7179429 - 7180760 + | hypothetical protein SCO6488 7180803 - 7182770 + | acyl-peptide hydrolase SCO6489 7182776 - 7183708 + | hypothetical protein SCO6490 7183718 - 7184317 + | acetyltransferase SCO6491 7184681 - 7184289 - | hypothetical protein SCO6492 7184832 - 7186829 + | hypothetical protein SCO6493 7187208 - 7186861 - | hypothetical protein SCO6494 7187223 - 7187840 + | hypothetical protein TERM 2315 7187908 - 7187856 - T 77 -17 -2.87132 | gap 1, overlap 7187825 CCGGCCGCGCACAGA GGTACGACCGCACAGGGGTACGCCC GCAC GGACG-ACATCCGTGCGGGCGTACC CCTGCCCTTCGCCCG SCO6495 7188888 - 7187926 - | dehydrogenase TERM 2316 7190860 - 7190812 - g 85 -17.4 -3.53012 | gap 2 GGCTCCGCCGGGAAA CGGCCCACCGCCCCGTCCGGACCG AGC CGGTCCG--CGGGTCAGCCGGCCG ACCCCGGCCCCGAGC SCO6496 7189075 - 7190964 + | dehydrogenase TERM 2317 7192046 - 7192100 + G 71 -15.5 -3.14132 | GCAGATGGTCGCCGC GGCGGTGGGGATGGCGGCCCGCGGC TGGGT GCCGTTCGCCACCACCTTCGCCGCC TTCCTGACCCGCGCG SCO6497 7190961 - 7192808 + | transketolase SCO6498 7192805 - 7193764 + | hypothetical protein SCO6499 7193830 - 7194222 + | gas vesicle synthesis protein SCO6500 7194294 - 7194728 + | gas vesicle synthesis-like protein SCO6501 7194725 - 7195498 + | gas vesicle synthesis protein SCO6502 7195503 - 7195766 + | gas vesicle synthesis protein SCO6503 7195763 - 7196482 + | hypothetical protein SCO6504 7196479 - 7197609 + | hypothetical protein SCO6505 7197606 - 7197935 + | gas vesicle synthesis protein SCO6506 7197932 - 7198711 + | gas vesicle protein SCO6507 7198708 - 7198890 + | gas vesicle synthesis protein TERM 2318 7199162 - 7199218 + G 86 -18.9 -3.38118 | gap 3, overlap 7199164 7199164 CTGGACCTCGGGCCG CTGG-GAC--CGCTGCTGCCCCGGGAGT GAGC ACTCCCGGGGCAGCAGCCTCGTCACCTG TTGTACGTCACTTGT SCO6508 7198892 - 7199188 + | gas vesicle synthesis protein TERM 2319 7199164 - 7199215 + T 85 -20.3 -2.54919 | gap 2, overlap 7199162 7199164 GGACCTCGGGCCGCT GGGAC--CGCTGCTGCCCCGGGAGT GAGC ACTCCCGGGGCAGCAGCCTCGTCAC CTGTTGTACGTCACT TERM 2320 7199164 - 7199216 + T 87 -20.1 -3.25668 | gap 3, overlap 7199164 7199162 GGACCTCGGGCCGCT GG-GAC--CGCTGCTGCCCCGGGAGT GAGC ACTCCCGGGGCAGCAGCCTCGTCACC TGTTGTACGTCACTT SCO6509 7199449 - 7199279 - | hydrophobic protein SCO6510 7200325 - 7199504 - | hypothetical protein TERM 2321 7200469 - 7200445 - R 75 -14.9 -3.40403 | overlap 7200447 GTGGTGTCAGGAGAA CAGGCCGCCGC CGG GCAGCGGCCGG TACACCGTGAGCGCC TERM 2322 7200467 - 7200447 - R 76 -16.1 -3.27475 | overlap 7200445 GGTGTCAGGAGAACA GGCCGCCGC CGG GCAGCGGCC GGTACACCGTGAGCG SCO6511 7201941 - 7200436 - | hypothetical protein TERM 2323 7202589 - 7202572 - g 93 -8.4 -5.06414 | overlap 7202574 GGGGGTGAACAAAAA CGCCTC GTCCTG GAGGCG CTGCTGCGCGGCACC SCO6512 7202065 - 7203684 + | ABC transporter ATP-binding protein SCO6513 7204835 - 7203714 - | hypothetical protein SCO6514 7204898 - 7205176 + | hypothetical protein SCO6515 7205800 - 7205258 - | protease SCO6516 7206224 - 7205826 - | hypothetical protein SCO6517 7206433 - 7208823 + | uvrA-like protein SCO6518 7208891 - 7209373 + | transcriptional regulator SCO6519 7209379 - 7209795 + | lyase SCO6520 7210082 - 7210882 + | RNA polymerase sigma factor SCO6521 7211022 - 7211978 + | secreted protein SCO6522 7212047 - 7213489 + | hypothetical protein SCO6523 7213486 - 7214526 + | hypothetical protein SCO6524 7215195 - 7214569 - | integral membrane protein SCO6525 7215959 - 7215192 - | hypothetical protein SCO6526 7216060 - 7216461 + | hypothetical protein SCO6527 7216569 - 7218722 + | hypothetical protein SCO6528 7218804 - 7220228 + | integral membrane transport protein TERM 2324 7220495 - 7220531 + G 70 -14.5 -3.21276 | gap 1, overlap 7220494 CTGGCGCCGGAGGAC CTGATCGG-CGTCCCG CAGATC CGGGACGGCCGGTCGG TGTTCTGCCCGCCCG SCO6529 7220309 - 7221370 + | ATP/GTP binding protein SCO6530 7221367 - 7223199 + | hypothetical protein SCO6531 7223286 - 7223711 + | ATP/GTP binding protein SCO6532 7224462 - 7223740 - | nitrate reductase gamma chain NarI SCO6533 7224953 - 7224459 - | nitrate reductase delta chain NarJ SCO6534 7226553 - 7224958 - | nitrate reductase beta chain NarH SCO6535 7230248 - 7226553 - | nitrate reductase alpha chain NarG TERM 2325 7230223 - 7230189 - G 83 -14.8 -3.61398 | opp_overlap 7230202 7230206 GCCCGGCCGGAAGAA CCGTCCCGCGCGCAGC AGC GCCGCGCCCGGCTCGG TGGGCGGTGTCCGCG SCO6536 7231212 - 7230397 - | hypothetical protein SCO6537 7232125 - 7231262 - | DNA-binding protein SC5C722c SCO6538 7232354 - 7232779 + | integral membrane protein SCO6539 7233579 - 7232761 - | hypothetical protein phhB 7233669 - 7233974 + | pterin-4-alpha-carbinolamine dehydratase SCO6541 7233979 - 7234725 + | hypothetical protein SCO6542 7234796 - 7236691 + | secreted glycosyl hydrolase SCO6543 7236940 - 7236695 - | hypothetical protein SCO6544 7237214 - 7237894 + | hypothetical protein SCO6545 7240559 - 7237887 - | secreted cellulase TERM 2326 7240600 - 7240642 + r 87 -20.4 -3.17212 | opp_overlap 7240594 7240592 7240597 7240596, overlap 7240604 AACAGAACACATGCG AGGACCGGGCGGCCCCAGGC GTG GGCAGGGGCCGCCCGGTCGG TTGGTCCCGTCGTCC TERM 2327 7240604 - 7240638 + r 95 -24.2 -2.56914 | opp_overlap 7240594 7240592 7240597 7240596, overlap 7240600 GAACACATGCGAGGA CCGGGCGGCCCCAGGC GTG GGCAGGGGCCGCCCGG TCGGTTGGTCCCGTC SCO6546 7243727 - 7240806 - | secreted cellulase SCO6547 7244086 - 7244250 + | hypothetical protein SCO6548 7244247 - 7245986 + | secreted cellulase TERM 2328 7246010 - 7246061 + F 100 -27.2 -5.00616 | opp_overlap 7245966, overlap 7246011 CCGCGCATGCCGCGC GGGTGAGCCGCCGGGGTCCGGTCC TTGC GGGCCGGGCCCCGGCGGCCTCCTC TTTTTTGCGGGAGCG TERM 2329 7246011 - 7246059 + F 100 -29.6 -4.13561 | gap 1, opp_overlap 7245966, overlap 7246010 CGCGCATGCCGCGCG GGTGAGCCGCCGGGGTCCGGTCC TTGC GGGCCGGGCCCCGGCGGC-CTCC TCTTTTTTGCGGGAG SCO6549 7246146 - 7247090 + | hypothetical protein SCO6550 7247175 - 7247876 + | oxidoreductase TERM 2330 7247925 - 7247878 - T 100 -43 -3.18274 | GGCAGCCCAACTGAA GACGGACGGAGGGCCCGGCCAC GCAC GTGGCCGGGCCCTCCGTCCGTC CGCACCGCTCAGGAG SCO6551 7248767 - 7247934 - | oxidoreductase SCO6552 7250677 - 7248851 - | long-chain-fatty-acid-CoA ligase SCO6553 7252420 - 7250906 - | integral membrane efflux protein TERM 2331 7251709 - 7251664 - G 74 -16.9 -3.13403 | gap 1, overlap 7251647 7251648 7251662 CGGGCCGCAGGAACA GCCGCGGATCGAGCAGCGGATC GGC GACCCGGTGCTCCA-CCGCGAC GAACGCGCCCAGCGC SCO6554 7252536 - 7253519 + | transcriptional regulatory protein SCO6555 7254379 - 7253501 - | LysR family transcriptional regulator SCO6556 7254532 - 7255569 + | transmembrane protein SCO6557 7257542 - 7255596 - | neuramidase (secreted protein) SCO6558 7258586 - 7257738 - | formate dehydrogenase accessory protein SCO6559 7259479 - 7258619 - | respiratory chain oxidoreductase SCO6560 7261416 - 7259476 - | respiratory chain oxidoreductase TERM 2332 7259881 - 7259846 - G 71 -11 -3.72576 | gap 1, opp_overlap 7259846 TCGGGGCGGACGAAA CCGCCG-GCGGCGCCGC CGA GCAGGACCGCGCGGAGG TTGTCGCGGACCCCG SCO6561 7263376 - 7261448 - | respiratory chain oxidoreductase SCO6562 7264344 - 7263373 - | 2-dehydropantoate 2-reductase TERM 2333 7264167 - 7264138 - G 71 -14.9 -3.12717 | overlap 7264134 7264132 ACCCAGGAACACATA GTCGACCGGGCCG ACTT CGGCCGGGTCGTC GGTGGCGCGCGGGTG SCO6563 7264548 - 7265888 + | integral membrane transporter SCO6564 7266172 - 7267122 + | 3-oxoacyl-(acyl carrier protein) synthase III SCO6565 7267256 - 7267933 + | transcriptional regulator SCO6566 7267996 - 7269378 + | ROK family protein SCO6567 7269589 - 7271106 + | ABC transporter ATP-binding protein SCO6568 7271103 - 7272122 + | ABC transporter integral membrane protein SCO6569 7272140 - 7273186 + | secreted solute binding protein TERM 2334 7273236 - 7273187 - f 95 -26.4 -2.52543 | gap 1 ACGGGCTTCAAGTGA GGGCTGCCGCTCCGGCGGCGGCC TGACC AGCCGCCGCCGGGGCGGG-GCCC ACCCACCGCGCCACC SCO6570 7273272 - 7274564 + | oxidoreductase SCO6571 7274581 - 7275579 + | DNA-binding protein TERM 2335 7278636 - 7278599 - g 75 -13.3 -3.66732 | opp_overlap 7278624 7278635, overlap 7278590 7278600 GAACTACGTCAAGAA CGGCGGCGGCTACATGG GCAT CCACGCCGCCGCCGACA CCGAGTACGACTGGG SCO6572 7275867 - 7279583 + | glycosyl hydrolase (secreted protein) SCO6573 7279753 - 7281006 + | secreted protein SCO6574 7281003 - 7282094 + | hypothetical protein SCO6575 7282091 - 7283038 + | hypothetical protein SCO6576 7283052 - 7283789 + | hypothetical protein SCO6577 7283789 - 7284637 + | hypothetical protein SCO6578 7284641 - 7285816 + | hypothetical protein SCO6579 7285813 - 7287210 + | hypothetical protein SCO6580 7287325 - 7288539 + | hypothetical protein SCO6581 7290049 - 7288619 - | transmembrane transport protein SCO6582 7292266 - 7290122 - | hypothetical protein SCO6583 7293503 - 7292271 - | formyl-coenzyme A transferase SCO6584 7295197 - 7293515 - | TPP-requiring enzyme TERM 2336 7296388 - 7296360 - g 79 -13.7 -3.65046 | overlap 7296361 CCTCGACGGGAACAA CGCCGCGCGGGGC CGG GCCCTGCTCGACG CCCGCGCGCACCCCC sucC 7295341 - 7296492 + | succinyl-CoA synthetase subunit beta SCO6586 7296507 - 7297433 + | succinyl-CoA synthetase subunit alpha SCO6587 7297430 - 7298992 + | dehydrogenase SCO6588 7300451 - 7299120 - | hypothetical protein TERM 2337 7300749 - 7300694 - H 87 -15.6 -3.58726 | gap 2, opp_overlap 7300705, overlap 7300701 7300703 7300705 CCCTCGGACACACAA GATCG-AAC-AGAGATGCCGGCCGGG CGATGT CCCGGCCGGCATCTTTCGTTTCGCCC CGTGGACCGCCGAAT TERM 2338 7300740 - 7300701 - H 82 -17.9 -3.23585 | opp_overlap 7300705, overlap 7300694 7300703 7300705 ACACACAAGATCGAA CAGAGATGCCGGCCGGG CGATGT CCCGGCCGGCATCTTTC GTTTCGCCCCGTGGA TERM 2339 7300738 - 7300703 - H 87 -20.5 -3.17362 | opp_overlap 7300705, overlap 7300701 7300694 7300705 ACACAAGATCGAACA GAGATGCCGGCCGGG CGATGT CCCGGCCGGCATCTT TCGTTTCGCCCCGTG TERM 2340 7300736 - 7300705 - H 100 -23.1 -3.14002 | opp_overlap 7300705, overlap 7300703 7300701 7300694 ACAAGATCGAACAGA GATGCCGGCCGGG CGATGT CCCGGCCGGCATC TTTCGTTTCGCCCCG TERM 2341 7300705 - 7300736 + H 100 -23.1 -4.05788 | opp_overlap 7300705 7300703 7300701 7300694 ACAAGATCGAACAGA GATGCCGGCCGGG CGATGT CCCGGCCGGCATC TTTCGTTTCGCCCCG TERM 2342 7301843 - 7301884 + G 72 -16.5 -2.89564 | TGCGGCTCCGCCTAC CGCAACCGCGGCGTCGAAC CGCT GCTGGACGCCGTGGTGGCG TATCTGCCCTCGCCG SCO6589 7301063 - 7303123 + | elongation factor G SCO6590 7305568 - 7303361 - | secreted esterase SCO6591 7306108 - 7305602 - | secreted protein SCO6592 7306619 - 7306230 - | secreted protein SCO6593 7310059 - 7306616 - | hypothetical protein TERM 2343 7308104 - 7308155 + g 70 -13.5 -3.34233 | overlap 7308098 7308128 GGTCCGCAGCGCCGC CGCGGCGGCCTCGGCCACGTTCT GCGTGG AGATCGCGGCGGTGGCCGCGGTG TTCTCCGCGTTGTCC TERM 2344 7308128 - 7308164 + g 79 -16.5 -3.44051 | overlap 7308104 CTCGGCCACGTTCTG CGTGGAGATCGCGGCGG TGG CCGCGGTGTTCTCCGCG TTGTCCTGCTGCAGC TERM 2345 7309199 - 7309214 + g 72 -11.8 -3.61715 | GGCCGCGGCACCCTG GGCGGC CCGC GCCGCC TTGTTCGCGGCCCTG TERM 2346 7310382 - 7310414 + r 81 -17.7 -3.02461 | CAGGGCCACAGCCGG GCCCTGAGGCCGACG TCA CGTCCGCCTCAGGGG TATTGCACCACCTTC SCO6594 7312216 - 7310408 - | secreted protein SCO6595 7312483 - 7313565 + | secreted protein SCO6596 7313660 - 7315429 + | secreted protein SCO6597 7315461 - 7318040 + | beta-glucosidase SCO6598 7318137 - 7319177 + | transcriptional regulator SCO6599 7319846 - 7319193 - | transcriptional regulator SCO6600 7321337 - 7320012 - | transcriptional regulator TERM 2347 7320176 - 7320120 - G 72 -12 -3.61398 | gap 1, overlap 7320121 GCCGCGGGCGAAGAA CGCCGCCAGGGGCAGGATCGCGGCGCC CACC GTCACCGCG-TCGGGCCCGAGGCGGCC CAGCGCGATGCCCAC SCO6601 7321513 - 7322829 + | secreted sugar binding protein TERM 2348 7322989 - 7322943 - g 95 -24.5 -3.02144 | GGACGGTCGGCAAGA GCTCC-CCCGGGACGGCGCGCGG ACC CCGC-CGCCGCCCCGGGCGGATC CGCCGCATCGGCCTG SCO6602 7322891 - 7323919 + | transmembrane sugar transport protein SCO6603 7323927 - 7324766 + | transmembrane sugar transport protein SCO6604 7324763 - 7326169 + | beta-glucosidase SCO6606 7327410 - 7326508 - | hypothetical protein TERM 2349 7326804 - 7326761 - G 77 -16.9 -3.19642 | gap 3 AGGACGAGGTAGGAA CCGGCGGGCAGCGCGTCGCGCA GGG TG-GCGACG-A-TGCCCGCCGG GTCCTGCGCGTCGGC SCO6607 7327541 - 7328326 + | hypothetical protein TERM 2350 7329121 - 7329160 + G 88 -17 -3.75024 | opp_overlap 7329111 7329100 7329101 GACGACCAGCGCGCT GGCGGCGTCGGCCGCCGC AACG GCCGCGGTCAACGCCGGC TTCTTCGTCCTCGAC SCO6608 7328456 - 7330114 + | secreted protein SCO6609 7330247 - 7331275 + | secreted protein SCO6610 7331426 - 7332799 + | secreted protein SCO6611 7333378 - 7332818 - | hypothetical protein SCO6612 7334332 - 7333403 - | hydrolase SCO6613 7334456 - 7334863 + | hypothetical protein SCO6614 7335116 - 7336225 + | hypothetical protein SCO6615 7336237 - 7337439 + | hypothetical protein SCO6616 7338883 - 7337453 - | secreted protein SCO6617 7339205 - 7338876 - | hypothetical protein SCO6618 7339949 - 7339269 - | hypothetical protein SCO6619 7340813 - 7339983 - | dehydrogenase SCO6620 7340945 - 7341376 + | hypothetical protein SCO6621 7341633 - 7342907 + | hypothetical protein SCO6622 7343142 - 7345028 + | ATP/GTP binding protein SCO6623 7345061 - 7347256 + | ATP/GTP binding protein TERM 2351 7347271 - 7347307 + T 79 -17.9 -2.70932 | AGCATTCGGTCGGAT GTGGAGTGGCGGGCCCC CCG GGAGCCCGCCACTCGCC TGCTTCAGAAGAGCA SCO6624 7347440 - 7347312 - | hypothetical protein SCO6625 7347655 - 7348320 + | hypothetical protein TERM 2352 7349874 - 7349823 - g 75 -12.8 -3.59979 | gap 1, opp_overlap 7349826, overlap 7349824 GCTGGTCACCGGAAA GGCCCCGGCCGCCAGCCAGGCCGAG TTG CT-GGCCCGCCTGGAGGCGGGGGAG GGCCTGCGCCCCAGC TERM 2353 7349873 - 7349824 - g 70 -16.3 -2.75844 | gap 1, opp_overlap 7349826, overlap 7349823 CTGGTCACCGGAAAG GCCCCGGCCGCCAGCCAGGCCGAG TTG CT-GGCCCGCCTGGAGGCGGGGGA GGGCCTGCGCCCCAG TERM 2354 7350436 - 7350385 - g 71 -15.1 -3.14344 | gap 3 TACGTCGGCGACGAA CGCGACGACGACGGCCCGG--GCGCC GAG GGCGCGACCCGCCCG-CGCCGCCGCG AGGAGACCGTCGCCC TERM 2355 7351717 - 7351690 - g 72 -12 -3.6284 | gap 1, overlap 7351680 7351691 AAGGACGAGCGCAAA CGCTGGAAGGCGG AGC CCGCCGTCCAG-G CACTGCGGGACGAGA SCO6626 7348537 - 7353210 + | protein kinase SCO6628 7357356 - 7356766 - | hypothetical protein SCO6627 7353207 - 7356839 + | hypothetical protein TERM 2356 7356870 - 7356898 + gF 76 -16 -3.14564 | CGTCGGTCGGTTCAG GGGCCACCCGGT GCGTG AGCGGGTGGCCC TTCGTCCGCACGTGC SCO6629 7357519 - 7358352 + | hypothetical protein SCO6630 7358349 - 7358552 + | hypothetical protein TERM 2357 7358996 - 7358975 - g 80 -7.9 -4.38712 | GCGAGCTGTAGAAAA GACTCCCGC TGCG GCGGGCATC ACCGTCGAGCTCCTC SCO6631 7358814 - 7359689 + | hypothetical protein TERM 2358 7360409 - 7360368 - g 89 -4.3 -5.08824 | gap 1, opp_overlap 7360398, overlap 7360369 7360370 CGGTGAGGTAAAAAA CTCGATCAGTGGCGGCACCT TCC ACGGACCGACACTGCTCG-G CAGGGACTTTTCGAA SCO6632 7359865 - 7360494 + | hypothetical protein SCO6633 7360499 - 7362409 + | transcriptional regulator SCO6634 7362458 - 7362646 + | hypothetical protein TERM 2359 7363518 - 7363477 - g 95 -23.1 -3.15427 | gap 1 AACATGGGGGACGAA GCCGTCATCCGCGCC-CTGG GCA CCAGCGGCGCGGACGACGCC GAGGAGGACGAGTGG SCO6635 7362943 - 7366827 + | bacteriophage resistance gene pglY TERM 2360 7368045 - 7368020 - g 79 -16.1 -3.32844 | CCGCCGACTGGAGAA CCACCGGCTCG CCGC CGAGCCGGAGG AGTCCGCCCGCATCG SCO6636 7366824 - 7369748 + | bacteriophage resistance gene pglZ SCO6637 7370869 - 7369817 - | hypothetical protein SCO6638 7372683 - 7370866 - | hypothetical protein SCO6639 7372859 - 7374208 + | ATP/GTP binding protein SCO6640 7374208 - 7376403 + | ATP-dependent helicase SCO6641 7377627 - 7376413 - | hypothetical protein SCO6642 7378070 - 7377777 - | hypothetical protein SCO6643 7378334 - 7378888 + | hypothetical protein SCO6644 7378997 - 7380508 + | solute-binding lipoprotein SCO6645 7380512 - 7382317 + | transport system permease protein SCO6646 7382319 - 7383629 + | transport system permease protein SCO6647 7384426 - 7383632 - | integral membrane protein TERM 2361 7384613 - 7384641 + G 85 -20.3 -3.02144 | GGAGCTGCCGGTACC GGGCGCGGACGAG GTG CTCGTGCGCGCCC TCTTCAGCGGGGTCA SCO6648 7384536 - 7384874 + | hypothetical protein SCO6649 7384871 - 7385545 + | hypothetical protein SCO6650 7385660 - 7386058 + | hypothetical protein SCO6651 7386055 - 7387293 + | glycosyl transferase SCO6652 7387290 - 7388675 + | hypothetical protein SCO6654 7390500 - 7389679 - | hypothetical protein SCO6653 7388672 - 7389874 + | hypothetical protein SCO6655 7390536 - 7391201 + | GTP cyclohydrolase II SCO6656 7392461 - 7391232 - | hypothetical protein SCO6657 7394136 - 7392553 - | hypothetical protein SCO6658 7395029 - 7394148 - | 6-phosphogluconate dehydrogenase-like protein pgi 7396683 - 7395031 - | glucose-6-phosphate isomerase SCO6660 7397611 - 7396676 - | hypothetical protein SCO6661 7399386 - 7397608 - | glucose-6-phosphate 1-dehydrogenase SCO6662 7400528 - 7399383 - | transaldolase SCO6663 7402688 - 7400592 - | transketolase TERM 2362 7401561 - 7401591 + g 81 -17.6 -3.29144 | GGCCCGGGTGGCGAC CGCCTTGCCGGTCT CGA ACACCGGCAGGGCG TTCTCCCAGCCCTCG SCO6664 7402846 - 7403751 + | transcriptional regulator TERM 2363 7403769 - 7403805 + T 100 -28.1 -2.78463 | opp_overlap 7403775 AACGCCGCACGGCGC GACGAAGGGGCCCCACG GTG CGTGGGGCCCCTTCGCC TCTCCTGCGGGGGGT TERM 2364 7403799 - 7403775 - T 100 -22.9 -3.14564 | opp_overlap 7403769 GCACGGCGCGACGAA GGGGCCCCACG GTG CGTGGGGCCCC TTCGCCTCTCCTGCG SCO6665 7405231 - 7403831 - | secreted glucosidase SCO6666 7407651 - 7405534 - | integral membrane protein TERM 2365 7407632 - 7407614 - G 91 -17.4 -3.58522 | AGCATCACGGTCAAA GGGCGGCG GGT CGCCGCCC GGGCGAGTGTGGACA SCO6667 7408466 - 7407798 - | two-component regulator SCO6668 7409680 - 7408463 - | two-component sensor SCO6669 7410506 - 7409712 - | transcriptional regulator SCO6670 7410645 - 7411970 + | glucosidase SCO6671 7413129 - 7411963 - | hypothetical protein TERM 2366 7412210 - 7412161 - G 95 -22.1 -3.18264 | gap 1, overlap 7412139 GTCCTGACCCAGGAA CGGCGGCTCCAGCTGGCCCGGGTC GTC GCCGAGGGCCAGCCGGA-CCGCCG CCCACGGCACGTTGA TERM 2367 7413291 - 7413349 + H 95 -25.8 -2.57132 | overlap 7413292 7413328 7413334 ACGAGCGTCACACGG ATGCCCCGGCCCGGCCATGCGGCGGCCC CCG GGACAGTCGCACGGCCGGGCCGGGTCGC CTTGTGACCCGCCCG TERM 2368 7413292 - 7413350 + H 100 -20.9 -3.28712 | gap 2, overlap 7413291 7413328 7413334 CGAGCGTCACACGGA TGC--CCCGGCCCGGCCATGCGGCGGCCC CCG GGACAGTCGCACGGCCGGGCCGGGTCGCC TTGTGACCCGCCCGG SCO6672 7413412 - 7414299 + | hypothetical protein SCO6673 7414296 - 7414976 + | hypothetical protein SCO6674 7415231 - 7414995 - | hypothetical protein SCO6675 7415983 - 7415327 - | DNA-binding protein SCO6677 7417309 - 7416767 - | ABC transporter ATP-binding protein SCO6676 7416168 - 7416875 + | hypothetical protein SCO6678 7418273 - 7417332 - | iron-sulfur oxidoreductase beta subunit TERM 2369 7418207 - 7418258 + g 71 -15.1 -3.1505 | GATGGCGCAGGGTGA GCACCAGCACGCCGTCGGCCG-CGG TCTC CCGGCGGCCGACGACGAGTTCG-GC TTCGTAGCGGGTCAT SCO6679 7418440 - 7418270 - | hypothetical protein SCO6680 7419516 - 7418437 - | oxidoreductase alpha subunit SCO6681 7419664 - 7422456 + | serine/threonine protein kinase SCO6682 7422494 - 7422622 + | hypothetical protein SCO6683 7422658 - 7424568 + | ABC transporter ATP-binding protein SCO6684 7424565 - 7426391 + | ABC transporter ATP-binding protein SCO6685 7427004 - 7426396 - | two-component system response regulator SCO6686 7427533 - 7428411 + | hypothetical protein SCO6687 7428452 - 7433488 + | DNA-binding protein SCO6688 7433569 - 7437084 + | hypothetical protein TERM 2370 7437378 - 7437418 + G 77 -15.4 -3.53012 | gap 1 GCCGCCGCCCTGGGC GCCGCCCCGGTCG-CGG ACCCGGCC CCGCCGGCCGGGACGGC TTTGCCCACCGCACC SCO6689 7437081 - 7438847 + | hypothetical protein SCO6690 7440206 - 7438926 - | transmembrane transport protein SCO6691 7440399 - 7442462 + | phospholipase C SCO6692 7443469 - 7442516 - | integral membrane protein SCO6693 7444281 - 7443466 - | hypothetical protein SCO6694 7444457 - 7445071 + | transcriptional regulator TERM 2371 7445146 - 7445204 + T 100 -22.3 -3.55444 | overlap 7445118 7445148 GACGGGGGCGGCGCG CACCCCCGGCCGGGCGGGGCACCCTTT GAGCG GAAGGGCGCCCCACCCGGCCGGCAGTC TTTCCGCGGTACCCC TERM 2372 7445148 - 7445202 + T 100 -24.9 -3.35597 | overlap 7445118 7445146 CGGGGGCGGCGCGCA CCCCCGGCCGGGCGGGGCACCCTTT GAGCG GAAGGGCGCCCCACCCGGCCGGCAG TCTTTCCGCGGTACC SCO6695 7446283 - 7445240 - | hypothetical protein SCO6696 7446559 - 7449240 + | regulatory protein SCO6697 7450394 - 7449267 - | 3-oxoadipate enol-lactone hydrolase/4-carboxymuconolactone decarboxylase SCO6698 7451755 - 7450391 - | 3-carboxy-cis,cis-muconate cycloisomerase SCO6699 7452357 - 7451752 - | protocatechuate 3,4-dioxygenase alpha subunit SCO6700 7453137 - 7452364 - | protocatechuate 3,4-dioxygenase beta subunit SCO6701 7454358 - 7453156 - | beta-ketoadipyl-CoA thiolase SCO6702 7455008 - 7454355 - | 3-oxoadipate CoA-transferase subunit B SCO6703 7455790 - 7455008 - | 3-oxoadipate CoA-transferase subunit A SCO6704 7456000 - 7456464 + | transcriptional regulator SCO6705 7457457 - 7456480 - | secreted protein SCO6706 7457668 - 7458858 + | glutathione-dependent aldehyde dehydrogenase ligC 7459941 - 7458874 - | ATP-dependent DNA ligase SCO6708 7460154 - 7460492 + | hypothetical protein TERM 2373 7461445 - 7461392 - g 86 -21.8 -2.62983 | gap 2 GGGACTTCGACATCA CGACCATGCCCGCGCG--CTTCGCCG AACT CGGCGACGTGCACGCGGGCATGGACG ACACGAGGTACTCCC SCO6709 7460584 - 7461609 + | hypothetical protein SCO6710 7463815 - 7461626 - | glycosyl hydrolase SCO6711 7466175 - 7463830 - | hypothetical protein TERM 2374 7466249 - 7466274 + H 78 -2.3 -4.77567 | opp_overlap 7466249, overlap 7466254 CCCGCGGCGACGAAA GCGGCGGTGGC GCAC GCCGCCCACCC TTTTCTTCTCGCGCT SCO6712 7466508 - 7467539 + | copper oxidase TERM 2375 7467546 - 7467580 + F 86 -20.6 -2.79133 | opp_overlap 7467530 7467528, overlap 7467536 7467545 GAGCACTGAGCCGGG GCCGGCCGGCGCCGCC ACC GGCGCCGCCGGTCAGC TGTCGTGGACCGTTC SCO6713 7467726 - 7468784 + | transcriptional regulator SCO6714 7469681 - 7468890 - | hydroxylase TERM 2376 7469834 - 7469846 + H 76 -3.4 -4.74103 | GCGGCGTTGATACCG CGTT GAGCG AACG TTTTTCGCTTCCCGG SCO6715 7469875 - 7470120 + | transcriptional regulator SCO6716 7470453 - 7470647 + | hypothetical protein SCO6717 7471678 - 7470692 - | acyl-[acyl-carrier protein] desaturase SCO6718 7472651 - 7471875 - | dimethylarginine dimethylaminohydrolase SCO6719 7475026 - 7472768 - | UvrA-like ABC transporter SCO6720 7476671 - 7475037 - | ABC transporter TERM 2377 7475790 - 7475813 + g 71 -10.3 -3.72576 | gap 1 GTACTTGCCAGCCGA CTGCTGGGCC GTCCG GGCCC-GCAG TTTCATCACCGCACG SCO6721 7476734 - 7477642 + | integral membrane protein SCO6722 7478121 - 7477705 - | regulator SCO6723 7478448 - 7479494 + | oxidoreductase (secreted protein) TERM 2378 7479678 - 7479646 - g 73 -17.6 -2.62263 | overlap 7479632 7479664 ACCGCGGCGAGAGCA CCGGCCGCGCCGAG GAGAT CGCGGCGCGGACGG TGAACAAGGAACGCG SCO6724 7479567 - 7479896 + | hypothetical protein SCO6725 7480202 - 7479906 - | hypothetical protein TERM 2379 7480040 - 7480077 + g 77 -18.3 -2.70932 | CGATCCGCGCACGGT CCCCCGCGACGGCGAGG ATCA CCCCGCCCTCGCGGGGC TCCTTGCGCCCGGAC TERM 2380 7480925 - 7480887 - g 83 -21.1 -2.62184 | gap 1 GGCTGCCGGAGACCA CCCGCAGGGCCGACGC CCTGTGCC GCG-CGGCCCTGCGGG ACGCCGCCTACCGGG SCO6726 7480244 - 7480945 + | endonuclease SCO6727 7481103 - 7480933 - | hypothetical protein TERM 2381 7481136 - 7481152 + H 74 -2.9 -4.62471 | overlap 7481131 ACTTCATGCCTTCAA GGGTTTC ATT GAACTCC TTTTTGGCACTTGGC SCO6728 7481296 - 7481442 + | hypothetical protein SCO6729 7482698 - 7481508 - | hypothetical protein SCO6730 7482906 - 7484102 + | racemase SCO6731 7484114 - 7485328 + | acetyl-CoA acetyltransferase SCO6732 7485381 - 7487561 + | fatty acid oxidative multifunctional enzyme SCO6733 7488326 - 7487571 - | transcriptional regulator SCO6734 7488549 - 7490018 + | L-asparagine permease SCO6735 7490061 - 7490546 + | hypothetical protein SCO6736 7492079 - 7490559 - | metallopeptidase TERM 2382 7491860 - 7491882 + g 70 -17 -2.70932 | TCGTCGCCGTCCCCT CCAGCCGGTC CGT GGCCGGCTGG TACTTCAGGCGCAGG SCO6737 7492215 - 7492493 + | hypothetical protein SCO6738 7492490 - 7493788 + | carboxypeptidase (secreted protein) TERM 2383 7493938 - 7493911 - g 73 -17 -2.97902 | opp_overlap 7493928 7493931, overlap 7493895 7493901 GAAGAGCACGACAGA GGCACGCTTCCG GGTT CGGAAGCGGGCC TTCCGGGGCAGGAGC SCO6739 7493869 - 7495605 + | BCCT family transporter SCO6740 7496600 - 7495638 - | D-amino acid oxidase SCO6741 7496667 - 7497704 + | oxidoreductase SCO6742 7497718 - 7499361 + | ABC transporter ATP-binding protein SCO6743 7501850 - 7499508 - | transcriptional accessory protein SCO6744 7501897 - 7502100 + | hypothetical protein SCO6745 7503082 - 7502204 - | hypothetical protein SCO6746 7503189 - 7504166 + | transcriptional regulator SCO6747 7504216 - 7504851 + | hypothetical protein SCO6748 7505611 - 7504838 - | enoyl CoA hydratase SCO6749 7505756 - 7506241 + | hypothetical protein SCO6750 7506901 - 7506308 - | isopentenyl-diphosphate delta-isomerase SCO6751 7508116 - 7507178 - | efflux protein SCO6752 7508594 - 7510411 + | integral membrane transferase SCO6753 7510408 - 7511160 + | nucleotide sugar-1-phosphate transferase TERM 2384 7511761 - 7511722 - g 73 -15.7 -3.23447 | gap 1, overlap 7511720 TCAAGGGCGAGAAGA TCGACGGCCTGGC-CGCC GCGAT GGCCCGCCAGGCCGGCGA GGCCGTCCTGCGCCA SCO6754 7511187 - 7512209 + | glycerol dehydrogenase SCO6755 7512283 - 7512966 + | transferase SCO6756 7512975 - 7513847 + | glycosyltransferase SCO6757 7513947 - 7514876 + | ABC transporter membrane component SCO6758 7514896 - 7515657 + | ABC transporter ATP-binding protein SCO6759 7516017 - 7516928 + | phytoene synthase TERM 2385 7517208 - 7517248 + G 72 -11.8 -3.60296 | gap 2, opp_overlap 7517208 TCGAGGAGGACGACA CCGACCCGGTCGCCGTCGCC CTC GCCGACG-CGGCCCGG-CGG TTTCCCATCCCGCTC SCO6760 7516937 - 7517875 + | phytoene synthase TERM 2386 7517928 - 7517918 - g 70 -2.4 -4.38712 | GGGACCCGTACAAAA CCGG CGG CGGG CAGTGGCGGGCAACC SCO6761 7517875 - 7518033 + | hypothetical protein TERM 2387 7519387 - 7519444 + G 100 -17.5 -4.15044 | gap 1 CGGTTCGCAGCGGTG TCGGGGCGGCGGCCGCCGCGCTCGGCGC CCT GGGCCGGTCCC-GCGGCCTCCTTCCCGA TTTCTTCGAGGAGGC SCO6762 7518030 - 7519466 + | phytoene dehydrogenase SCO6763 7519463 - 7520599 + | polyprenyl synthatase SCO6764 7520716 - 7522758 + | squalene-hopene cyclase SCO6765 7522758 - 7523399 + | lipoprotein SCO6766 7523406 - 7524428 + | hypothetical protein TERM 2388 7525572 - 7525548 - g 72 -14.2 -3.40299 | GGAGCAGATGGAGAA GGACGGCGCC TCGGG GGCGCCGGCC GTCACCGTGAGCTGA ispG 7524433 - 7525587 + | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase SCO6768 7525613 - 7527583 + | 1-deoxy-D-xylulose-5-phosphate synthase TERM 2389 7528184 - 7528168 - g 72 -11.5 -3.65046 | GCGGGAGCTGAAGAA GGGCGAC GTG GCCGCCC TGATCGTGGAGCCGG SCO6769 7527584 - 7528969 + | aminotransferase SCO6770 7529043 - 7529657 + | DNA-binding protein SCO6771 7529654 - 7529773 + | small hydrophobic secreted protein SCO6772 7530658 - 7529795 - | hypothetical protein TERM 2390 7531119 - 7531102 - H 75 -14.1 -3.53091 | ACGGCTTGGGGTAAA GCCGCGC TCCG GCGCGGC CGGGCATCTCCAGCC SCO6773 7531179 - 7532117 + | secreted peptidase TERM 2391 7532177 - 7532150 - f 81 -18.4 -3.05384 | CCCCCGCGCACCGAA GGCCGGACCCCG ATCC CCGGGTCCGGCC TTCGGCGTGTCCGGA SCO6774 7532361 - 7533146 + | hypothetical protein SCO6775 7533869 - 7533249 - | transcriptional regulator SCO6776 7534102 - 7535214 + | hypothetical protein SCO6777 7536285 - 7535353 - | beta-lactamase SCO6778 7537048 - 7536362 - | transcriptional regulator SCO6779 7537378 - 7537178 - | hypothetical protein SCO6780 7537508 - 7538713 + | secreted protein TERM 2392 7538732 - 7538703 - T 81 -18.5 -3.04144 | TCCCCACCGGCAACA GGCCGGGCTGACC CACC GGCCCGCCCGGCC GCCCGCTCACAGGCC SCO6781 7539953 - 7538739 - | regulatory protein SCO6782 7541155 - 7540064 - | zinc-binding alcohol dehydrogenase SCO6783 7541619 - 7541152 - | hypothetical protein SCO6784 7542313 - 7541642 - | regulatory protein SCO6785 7542559 - 7543722 + | fatty acid co-A racemase SCO6786 7543722 - 7544747 + | oxidoreductase SCO6787 7544744 - 7545892 + | acyl-CoA dehydrogenase SCO6788 7545965 - 7547179 + | acetyl-CoA acetyltransferase TERM 2393 7549292 - 7549315 + G 81 -13.8 -3.72576 | opp_overlap 7549274 7549275 CTACGACGGCGGCGC CGGGGCAGGC GCGG GCCTGCCCGG TTTCGTCGCCCGCGC SCO6789 7547223 - 7549424 + | fatty oxidation protein SCO6790 7549461 - 7551299 + | long chain fatty acid CoA ligase TERM 2394 7551324 - 7551363 + T 95 -25.7 -2.70932 | CGGCTGCCGGGACCG ATGGCGCCGCCCGCCCC CCCACC GGGGCGGGCGGCGCCGC TCGTTCACCGGCCGG SCO6791 7552519 - 7551380 - | acyl-CoA dehydrogenase SCO6792 7552594 - 7553190 + | TetR family transcriptional regulator SCO6793 7554719 - 7553214 - | aldehyde dehydrogenase SCO6794 7555369 - 7557321 + | membrane protein SCO6795 7557438 - 7557872 + | hypothetical protein SCO6796 7557869 - 7558249 + | hypothetical protein SCO6797 7558302 - 7558856 + | ATP/GTP binding protein SCO6798 7558853 - 7559428 + | hypothetical protein tdh 7559630 - 7560658 + | L-threonine 3-dehydrogenase SCO6800 7560698 - 7561891 + | 2-amino-3-ketobutyrate coenzyme A ligase SCO6801 7561923 - 7562825 + | LysR family transcriptional regulator SCO6802 7562872 - 7563450 + | DNA-binding protein SCO6803 7563447 - 7563992 + | acetyltransferase SCO6804 7563999 - 7564382 + | hypothetical protein TERM 2395 7565469 - 7565525 + G 70 -14.2 -3.30441 | gap 1, overlap 7565477 GCGAGCGTCGGCGCC GGGCTCGGCGTCCCC-GCCATGGCGGC CGGC GCCGCCGTCGCCGGGGCCGGCATGTCC TTCTGGGGCGTGATG SCO6805 7564533 - 7565837 + | integral membrane efflux protein TERM 2396 7566046 - 7566090 + T 95 -18.8 -3.61398 | gap 1, opp_overlap 7566019 7566041, overlap 7566052 ACTCATATGAGTCGC AGGTC-AGGGCTGGTTTCGGA GGCA TCCGAAACCAGCCCTTGATCA TTCTTGGGGACCAGA TERM 2397 7566052 - 7566083 + T 100 -23.2 -3.33171 | opp_overlap 7566019 7566041, overlap 7566046 ATGAGTCGCAGGTCA GGGCTGGTTTCGGA GGCA TCCGAAACCAGCCC TTGATCATTCTTGGG SCO6806 7567347 - 7566130 - | phage integrase TERM 2398 7567849 - 7567887 + r 75 -16.1 -3.06696 | opp_overlap 7567845 7567858, overlap 7567851 7567858 TGGCGAAATAATCGT CTTCGGAAACGCCGGTT TGGCT AACCGGCGTTTCCGGGC TATGTTGCCGCCGAG TERM 2399 7567858 - 7567878 + r 72 -12.6 -3.57387 | opp_overlap 7567845 7567858, overlap 7567851 7567849 AATCGTCTTCGGAAA CGCCGGTT TGGCT AACCGGCG TTTCCGGGCTATGTT TERM 2400 7567878 - 7567858 - R 72 -12.6 -3.53343 | opp_overlap 7567851 7567858 7567849, overlap 7567845 AATCGTCTTCGGAAA CGCCGGTT TGGCT AACCGGCG TTTCCGGGCTATGTT SCO6807 7570044 - 7568251 - | hypothetical protein SCO6808 7570968 - 7570606 - | transcription regulator ArsR SCO6809 7572336 - 7571107 - | integral membrane transport protein SCO6810 7572801 - 7572343 - | hypothetical protein SCO6811 7574263 - 7572869 - | secreted protein TERM 2401 7573804 - 7573827 + g 80 -11 -4.15222 | overlap 7573805 7573807 AGGTGCCGGAGGCAT CGATCACCGC AGAG GCGGTGATCC TTTCTTCCCGGCCGT TERM 2402 7574699 - 7574738 + G 80 -7.8 -4.37886 | gap 1 CTTCTTGAGTCGGAG CGCCGTGC-CAGTTGGGTG TAC TACCGAGTTGCGCCCGGCG TTTTGTCGGCCATGG SCO6812 7574420 - 7574779 + | transcription regulator ArsR SCO6813 7574897 - 7575238 + | transcription regulator ArsR SCO6814 7576030 - 7575359 - | ABC transporter ATP-binding protein SCO6815 7577847 - 7576036 - | ABC transporter permease protein TERM 2403 7576083 - 7576063 - G 71 -12.5 -3.53012 | opp_overlap 7576082 TCGTTCCCCCTCAAA GCGGTTGCG CAG CGCGACCGC CGCGCTGAGAAGTAC SCO6816 7578723 - 7577851 - | ABC transporter binding lipoprotein TERM 2404 7578602 - 7578629 + g 80 -7.7 -4.56597 | gap 1 ACCGGAGCCACGGTG GTGGACCCGCTG ACCTG CAGCGCG-CCAC TTTTTCCGGCCCCGC SCO6817 7579403 - 7579044 - | hypothetical protein SCO6818 7580935 - 7579400 - | phosphoglyceromutase SCO6819 7582254 - 7580932 - | 3-phosphoshikimate 1-carboxyvinyltransferase SCO6820 7584639 - 7582309 - | oxidoreductase TERM 2405 7584890 - 7584914 + r 86 -18.6 -3.32963 | GCATGGCGGTGCCCG GGCCGTGCGG GCGTG CCGCACGGCC TTGTCGGATACGGAT SCO6821 7585664 - 7584942 - | hypothetical protein TERM 2406 7587849 - 7587876 + G 90 -12.6 -4.30719 | overlap 7587850 GATCGCCGTGGGTGT CGCGGCGGTCGG TGCC CTGGCCGCCGCC TTTATTCTGCCCCGA TERM 2407 7587850 - 7587875 + G 74 -16.1 -3.1811 | overlap 7587849 ATCGCCGTGGGTGTC GCGGCGGTCGG TGCC CTGGCCGCCGC CTTTATTCTGCCCCG SCO6822 7586410 - 7587975 + | integral membrane efflux protein SCO6823 7587993 - 7588445 + | transcription regulator ArsR SCO6824 7589635 - 7588532 - | phosphonopyruvate decarboxylase (fragment) SCO6825 7590327 - 7589632 - | integral membrane protein TERM 2408 7590362 - 7590407 + r 86 -18.9 -3.14132 | gap 1, opp_overlap 7590358 GGTGCGAATGAGCGG ACATG-CCGCCTGCCGGCCCCG TCG CGGGACCGGCAGGCGGGCGGGG TTGATCAGCCGGCGG SCO6826 7591452 - 7590412 - | hypothetical protein SCO6827 7598555 - 7591479 - | polyketide synthase SCO6828 7599249 - 7600730 + | secreted protein TERM 2409 7600735 - 7600784 + T 84 -19.3 -2.80113 | gap 1, opp_overlap 7600771 CCGGCTGCTGAACCG C-CCCGACCGGTCGTCCCTCCCCG CCC TGGGGAAGGACGACCGGTCAGCAG TCTGGTCAGGTGATG SCO6829 7601569 - 7600790 - | oxidoreductase SCO6830 7601654 - 7602007 + | transcription regulator ArsR SCO6831 7602498 - 7602773 + | hypothetical protein SCO6832 7602829 - 7604424 + | methylmalonyll-CoA mutase SCO6833 7604468 - 7604947 + | isobutyryl-CoA mutase, small subunit SCO6834 7606241 - 7605261 - | thioredoxin reductase SCO6835 7606651 - 7606238 - | arsenate reductase SCO6836 7606744 - 7607052 + | transcription regulator ArsR SCO6837 7607049 - 7608155 + | arsenic resistance membrane transport protein SCO6838 7608214 - 7609278 + | monooxygenase SCO6839 7610765 - 7609452 - | hypothetical protein SCO6840 7612807 - 7610762 - | hypothetical protein TERM 2410 7611008 - 7611018 + g 71 -6.8 -4.14739 | CGGTTTGGGAACACC GTGC AGC GCAC TTTTGAGATCCATGG SCO6841 7613335 - 7614387 + | hypothetical protein TERM 2411 7614494 - 7614532 + T 100 -30.5 -2.52676 | TGGACTACCTATGGT GCGCGGGATCGCCGGTT TGTCC AACCGGCGATCCCGCGC TACCTTGCCCCGCTC SCO6842 7615928 - 7614564 - | hypothetical protein SCO6843 7617112 - 7615994 - | hypothetical protein SCO6844 7618383 - 7617112 - | DNA methylase SCO6845 7619000 - 7618380 - | hypothetical protein SCO6846 7619880 - 7619557 - | hypothetical protein SCO6847 7620910 - 7620290 - | hypothetical protein SCO6848 7621461 - 7621003 - | hypothetical protein SCO6849 7623185 - 7621458 - | hypothetical protein SCO6850 7624064 - 7623285 - | hypothetical protein SCO6851 7624633 - 7624067 - | hypothetical protein SCO6852 7625485 - 7624664 - | hypothetical protein SCO6853 7625557 - 7625841 + | hypothetical protein SCO6854 7626660 - 7625857 - | hypothetical protein SCO6855 7627040 - 7626657 - | hypothetical protein SCO6856 7628124 - 7627477 - | hypothetical protein SCO6857 7628879 - 7628121 - | hypothetical protein SCO6858 7629609 - 7628905 - | hypothetical protein SCO6859 7630453 - 7629623 - | hypothetical protein SCO6860 7630887 - 7630450 - | hypothetical protein TERM 2412 7630933 - 7630972 + r 71 -15.1 -3.10522 | gap 1, opp_overlap 7630930 7630943, overlap 7630934 7630943 TGGGAGGAACAATGG TCCGGAGGAACGCCGGTT TGGCT AACCGGCGTTTC-CCGGC TATGTTGCCTCGGCT TERM 2413 7630943 - 7630963 + r 72 -12.6 -3.57387 | opp_overlap 7630943 7630930, overlap 7630934 7630933 AATGGTCCGGAGGAA CGCCGGTT TGGCT AACCGGCG TTTCCCGGCTATGTT SCO6861 7632703 - 7631006 - | protein kinase-like protein TERM 2414 7631819 - 7631861 + g 100 -24.9 -3.25823 | gap 1, opp_overlap 7631803, overlap 7631856 GATCTCGTACCGCTC GCCGGCCGAGTCCGGCTCGG TCCG CTG-GCCGGCCTCGGCCGGC TTCGTGTGACGCCGG SCO6862 7633056 - 7632712 - | hypothetical protein SCO6863 7633819 - 7633190 - | hypothetical protein SCO6864 7635678 - 7633888 - | hypothetical protein SCO6865 7636883 - 7635675 - | regulatory protein SCO6866 7638457 - 7637267 - | hypothetical protein SCO6867 7638912 - 7638454 - | hypothetical protein SCO6868 7640056 - 7638950 - | hypothetical protein SCO6869 7640792 - 7640049 - | hypothetical protein SCO6870 7641461 - 7640844 - | hypothetical protein SCO6871 7642568 - 7641501 - | lipoprotein SCO6872 7643502 - 7642591 - | hypothetical protein SCO6873 7643734 - 7643492 - | hypothetical protein SCO6874 7644442 - 7643807 - | hypothetical protein SCO6875 7644821 - 7644396 - | hypothetical protein SCO6876 7645406 - 7644900 - | hypothetical protein SCO6877 7646185 - 7645403 - | hypothetical protein SCO6878 7647787 - 7646264 - | ATP-binding protein SCO6879 7648277 - 7647816 - | hypothetical protein SCO6880 7649820 - 7648378 - | lipoprotein SCO6881 7651331 - 7649943 - | ATP-binding protein TERM 2415 7651334 - 7651347 + r 70 -4.5 -4.38927 | overlap 7651320 TGCAGAAACCCACGG GGAGT TACT GCTCC TTTCTTGTGTCAGGC SCO6882 7652060 - 7651368 - | hypothetical protein SCO6883 7652374 - 7652060 - | hypothetical protein SCO6884 7653630 - 7652497 - | secreted protein TERM 2416 7653985 - 7653944 - H 95 -11.5 -4.72272 | gap 1, opp_overlap 7653947 7653953 7653956 GCGGTTGACCAAAAA GTACGGCG-GGAGGTGCCGG TTT CCGGCACCCCGACACGGCAC TTCTTGGTCGTCGGC SCO6885 7654146 - 7654901 + | DNA methylase TERM 2417 7655249 - 7655290 + G 70 -13.6 -3.31144 | gap 1 TCGGTATGCCGGGAC TC-GGCGGGTCACCGGCCG CCGCT CCGCCGGAGCCCCGCCCGA TTCTGGAACTCGACG TERM 2418 7655367 - 7655314 - g 71 -15.4 -3.15544 | gap 1, opp_overlap 7655326, overlap 7655326 CTCGACGGGGAGGAA CGGGAAGACGAAGTCGACG-CCC TCTCGGACT GGGTCGACGACTTCCTCCTCCCG GTCTACGGGGCGGAG SCO6886 7655068 - 7655703 + | hypothetical protein SCO6887 7655700 - 7656185 + | hypothetical protein SCO6888 7656204 - 7656902 + | hypothetical protein SCO6889 7656920 - 7657660 + | hypothetical protein TERM 2419 7657701 - 7657723 + F 73 -13.5 -3.31248 | opp_overlap 7657691 7657693 7657717 CAACATAGCCGACGA TCGCCGGTT AGCCA AACCGGCGA TTCTCCGAACTCTTA SCO6890 7657809 - 7658258 + | secreted protein SCO6891 7658251 - 7658733 + | hypothetical protein SCO6892 7658730 - 7659212 + | hypothetical protein SCO6893 7659287 - 7659598 + | hypothetical protein SCO6894 7659639 - 7660481 + | hypothetical protein SCO6895 7660478 - 7660993 + | regulator (fragment) SCO6896 7660990 - 7662225 + | integral membrane protein SCO6897 7662258 - 7662569 + | hypothetical protein TERM 2420 7662568 - 7662578 + F 74 -2.4 -4.7373 | GTTGCCGCGCCGCCT GAGG CAC CCCC TTTTTCCTGCCCTGC SCO6898 7662638 - 7663855 + | carboxylase SCO6899 7663852 - 7665003 + | hypothetical protein SCO6900 7665000 - 7665629 + | hypothetical protein SCO6901 7665653 - 7666519 + | hypothetical protein SCO6902 7666548 - 7667036 + | hypothetical protein SCO6903 7667084 - 7667884 + | hypothetical protein SCO6904 7667918 - 7668928 + | hypothetical protein SCO6905 7669027 - 7669404 + | hypothetical protein SCO6906 7671207 - 7669618 - | hypothetical protein TERM 2421 7672016 - 7671982 - g 83 -14.9 -3.61398 | gap 1, opp_overlap 7671980, overlap 7671983 GGCGCTGGTCAACAA TGCC-CCGGCCGCGCG AGGT CGGGCGGCCGGAGGCG AGTCATTCAAAGCGA TERM 2422 7672015 - 7671983 - g 77 -18.4 -2.76696 | gap 1, opp_overlap 7671980, overlap 7671982 GCGCTGGTCAACAAT GCC-CCGGCCGCGCG AGGT CGGGCGGCCGGAGGC GAGTCATTCAAAGCG SCO6907 7671335 - 7672108 + | DNA ligase SCO6908 7673991 - 7672687 - | hypothetical protein SCO6909 7674795 - 7675178 + | hypothetical protein TERM 2423 7675337 - 7675306 - T 100 -20.2 -5.46706 | opp_overlap 7675306 AGTCGAAAATAAAAA GCTCCCTGCCGCCA GGGT TGGAGGCAGGGAGC TTTCAAGTTATTCGG TERM 2424 7675306 - 7675337 + T 95 -20.2 -3.72051 | opp_overlap 7675306 AGTCGAAAATAAAAA GCTCCCTGCCGCCA GGGT TGGAGGCAGGGAGC TTTCAAGTTATTCGG SCO6910 7676473 - 7675634 - | insertion element transposase SCO6913 7677996 - 7678349 + | hypothetical protein SCO6914 7678455 - 7678745 + | hypothetical protein TERM 2425 7679406 - 7679436 + G 74 -14.7 -3.52102 | gap 1, overlap 7679427 CCGGACGGATGGCAG GCGTGG-GCCGAGC CCGT GCTCGGCGCCCCGC TTCTGTGGGTGGCCT SCO6915 7678761 - 7679582 + | hypothetical protein TERM 2426 7679611 - 7679644 + T 72 -12.4 -3.53779 | overlap 7679608 7679612 CCTCTCGACGGTCGC AGTCCGGCATCCTC CGAGTT GGGGGTGCCGGACC TTCCTATTTTCCGGG TERM 2427 7679612 - 7679643 + T 72 -15.9 -2.71785 | overlap 7679611 7679608 CTCTCGACGGTCGCA GTCCGGCATCCTC CGAGTT GGGGGTGCCGGAC CTTCCTATTTTCCGG TERM 2428 7679741 - 7679698 - T 100 -21.7 -3.32963 | opp_overlap 7679737 ATGGGCAGCCCATAA CGCGCTGCTGCCCCCGACC TGCGGT GGTCGGAGGCAGCTGCGTG ACGTGCGCGCAGGTC SCO6916 7680447 - 7679755 - | secreted protein SCO6917 7681016 - 7680528 - | hypothetical protein SCO6918 7682922 - 7681180 - | hypothetical protein SCO6919 7683453 - 7682938 - | hypothetical protein TERM 2429 7683432 - 7683472 + g 76 -19.1 -2.56596 | overlap 7683386 7683428 CTCCAGTGGCGGGGG AGCCCTTGGATACTCCGCT CAA GGCGGAGTATCCAAGGGGA TAACTTGCTCGCCCC SCO6920 7683878 - 7683546 - | hypothetical protein TERM 2430 7683804 - 7683830 + g 74 -14.4 -3.57144 | opp_overlap 7683799, overlap 7683789 CCTCCTAACAGGGGC GGTGGCCCGG CGTGGAA CCGGGCCGCC TTTACGGGTACGAGC SCO6921 7685787 - 7684057 - | membrane protein TERM 2431 7684308 - 7684321 + g 71 -8.1 -3.99374 | GCGGAGAGCGGGACC GGGCA CGCT TGCCC TTGTTCTTCGTCCGG SCO6922 7686425 - 7685784 - | hypothetical protein SCO6923 7687302 - 7686586 - | hypothetical protein SCO6924 7688201 - 7687305 - | DNA-binding protein TERM 2432 7687697 - 7687739 + g 79 -14 -3.60971 | overlap 7687720 TCTGTGTGCCGGTAG CCGGTACATCCCTGTGCCGG TTT CCGGCACGTCGGGGTGCCGG TTTACGCCTTGACCT TERM 2433 7687720 - 7687759 + g 72 -11.4 -3.62096 | overlap 7687697 TCCCTGTGCCGGTTT CCGGCACGTCGGGGTG CCGGTTTA CGCCTTGACCTGCCGG TTTCCGGTACTGCCG SCO6925 7689048 - 7688836 - | hypothetical protein TERM 2434 7689517 - 7689485 - H 77 -10.6 -4.10007 | gap 1, opp_overlap 7689485, overlap 7689474 ACAAGTCGGTCAAAA TGCGGTGACCGGCAA TCTT CTGCCGGTCGC-GCA GTGCCGCCATCGCTC SCO6926 7689630 - 7690454 + | hypothetical protein SCO6927 7692905 - 7691781 - | hypothetical protein SCO6928 7694997 - 7692907 - | O-methyltransferase SCO6929 7696275 - 7695016 - | hypothetical protein SCO6930 7699360 - 7696262 - | hypothetical protein SCO6931 7699626 - 7699447 - | hypothetical protein SCO6932 7699795 - 7699664 - | hypothetical protein SCO6934 7700728 - 7700261 - | secreted protein SCO6933 7699873 - 7700322 + | hypothetical protein TERM 2435 7700456 - 7700429 - GT 70 -13.4 -3.40403 | gap 1 CGTCTCGGAGTAGAA CGGCAGCTGTCCG TCG CGGAC-GCGGCCG AGGCAGTGTCGGACG SCO6935 7701378 - 7700803 - | hypothetical protein SCO6936 7702028 - 7701375 - | hypothetical protein SCO6937 7702585 - 7702025 - | DNA-binding protein SCO6938 7703887 - 7702634 - | acyl-CoA dehydrogenase SCO6939 7704611 - 7703970 - | hypothetical protein SCO6940 7705189 - 7704611 - | ATP/GTP binding protein SCO6941 7705652 - 7705245 - | hypothetical protein SCO6942 7706164 - 7705649 - | hypothetical protein SCO6943 7707743 - 7706226 - | sensor histidine-kinase SCO6944 7709672 - 7707771 - | hypothetical protein SCO6945 7710085 - 7709876 - | hypothetical protein SCO6946 7710167 - 7710406 + | hypothetical protein SCO6947 7710446 - 7711951 + | hypothetical protein SCO6948 7711970 - 7712521 + | hypothetical protein SCO6949 7713266 - 7712805 - | hypothetical protein SCO6950 7713425 - 7714828 + | hypothetical protein SCO6951 7714825 - 7715706 + | hypothetical protein SCO6952 7716844 - 7715801 - | hypothetical protein TERM 2436 7716795 - 7716809 + g 72 -11.4 -3.6968 | CCGATCGTCCGGCTC GCGCGT TGG ACGCGC TTGTTCGAGTTCTCA SCO6953 7719441 - 7717864 - | hypothetical protein TERM 2437 7719718 - 7719757 + H 100 -31 -3.8211 | opp_overlap 7719710 GGAGACAGTCGTTGA TCGAGGGGCGGTTTCGGA GAGA TCCGAAACCGCCCCTCGA TTGTTCTCCCTGCGG SCO6954 7719817 - 7722720 + | putative monovalent cation/H+ antiporter subunit A SCO6955 7722717 - 7723481 + | putative monovalent cation/H+ antiporter subunit C SCO6956 7723478 - 7725217 + | putative monovalent cation/H+ antiporter subunit D SCO6957 7725214 - 7725813 + | putative monovalent cation/H+ antiporter subunit E SCO6958 7725810 - 7726127 + | membrane protein SCO6959 7726124 - 7726489 + | putative monovalent cation/H+ antiporter subunit G SCO6960 7727039 - 7726503 - | hypothetical protein SCO6961 7728259 - 7727111 - | hypothetical protein SCO6962 7729661 - 7728261 - | glutamine synthetase SCO6963 7730619 - 7729774 - | lipoprotein SCO6964 7731587 - 7730937 - | hypothetical protein SCO6965 7731922 - 7731590 - | hypothetical protein SCO6966 7733075 - 7732266 - | lipase SCO6967 7733254 - 7734441 + | beta-ketoadipyl-CoA thiolase SCO6968 7734509 - 7736044 + | long-chain-fatty-acid-CoA ligase SCO6970 7738951 - 7736807 - | membrane transport protein SCO6969 7736107 - 7736880 + | integral membrane protein SCO6971 7739795 - 7739022 - | precorrin 6A synthase SCO6972 7740392 - 7739853 - | hypothetical protein TERM 2438 7740573 - 7740610 + r 100 -28.7 -3.29649 | overlap 7740576 TCGTCCCGACGGTGC GAAGGGCCTTCACGGAC GCGA GTCCGTGAAGGCCCTTC TTCGTGTCGTCCCCT TERM 2439 7740576 - 7740607 + r 100 -24.6 -3.78778 | overlap 7740573 TCCCGACGGTGCGAA GGGCCTTCACGGAC GCGA GTCCGTGAAGGCCC TTCTTCGTGTCGTCC SCO6973 7741057 - 7740635 - | hypothetical protein TERM 2440 7740983 - 7741033 + g 70 -2.2 -4.4281 | overlap 7740985 CCGCAGCGCGGCCCG CACCCGCGCCGGCTCGCCGACG AGCGCGG CGTCGACGAGACGACGGGACAG TTTCTTGTGCTTTCG SCO6974 7741956 - 7741171 - | GntR family regulatory protein SCO6975 7743884 - 7742010 - | acetolactate synthase SCO6976 7744777 - 7743881 - | hypothetical protein SCO6977 7745727 - 7744831 - | hypothetical protein TERM 2441 7744938 - 7744893 - G 81 -19.7 -2.62184 | gap 1, opp_overlap 7744931 CGGCCGGGTAGAGCA GCG-AGCGGCCGACCACCATGC CCT GCACGGTGGGCAGCCGCAGCGC CTTGCGCCAGCGTTC SCO6978 7746703 - 7745741 - | carbohydrate kinase SCO6979 7746957 - 7747979 + | solute-binding lipoprotein SCO6980 7747976 - 7749055 + | ABC transporter membrane protein SCO6981 7749062 - 7750054 + | ABC transporter ATP-binding protein SCO6982 7750057 - 7750959 + | hypothetical protein TERM 2442 7750963 - 7751012 + F 73 -13.5 -3.35679 | TGCGGCGCCTGAGAC CGGCCGCACCG-GCGGGGGAGCG TCCCGT CGGTGCCCCGCTCGGCG-GGCCG TTGTCAGTGGCGCGC SCO6983 7751075 - 7751488 + | hypothetical protein TERM 2443 7751511 - 7751469 - T 81 -17.8 -3.04144 | gap 1 CCTGGATGGTGAACA TCAGCGAGCCGGCGGGCTG ACCGGG CAGCCCGCCGGACCG-TGA ACCCGCCGCACCCCC SCO6984 7752603 - 7751527 - | oxidoreductase SCO6985 7753763 - 7752600 - | hypothetical protein SCO6986 7753893 - 7754939 + | DNA-binding protein SCO6987 7755003 - 7755470 + | hypothetical protein SCO6988 7756784 - 7755621 - | oxidoreductase TERM 2444 7756158 - 7756140 - G 74 -16 -3.14132 | CCGCTCCGGCACGAA GACCGCCG TGT CGGCGGTC AGCGAGGCGATGTCG SCO6989 7757431 - 7756901 - | hypothetical protein SCO6990 7758473 - 7757496 - | membrane transport protein SCO6991 7758904 - 7759110 + | hypothetical protein TERM 2445 7759313 - 7759344 + T 100 -15.8 -4.67608 | overlap 7759298 CCCGACGGTTGCGAA GGGTCTTCGCGGGC GAAA GCTCGCGGGGGCCC TTTTCTCTTGGCCTC TERM 2446 7759721 - 7759684 - T 100 -22.7 -3.57792 | overlap 7759685 CGAGCGATCCGGAAA TCGCCGTGCCCGCCGCC CCCC AGCGGCGGACACGGCGT GTGCCGCGGCGCGCG TERM 2447 7759720 - 7759685 - T 95 -26.2 -2.74461 | overlap 7759684 GAGCGATCCGGAAAT CGCCGTGCCCGCCGCC CCCC AGCGGCGGACACGGCG TGTGCCGCGGCGCGC SCO6992 7760904 - 7759825 - | regulatory protein SCO6993 7760983 - 7762803 + | regulatory protein SCO6994 7766112 - 7762852 - | hypothetical protein TERM 2448 7764231 - 7764199 - G 70 -14.2 -3.21099 | gap 1 GGGCCCCAGCAGCAA CTGCTGGAGGC-GCG CGCC CGCCGCCTCCACCAG CGGCAGCCGGGCCTC SCO6995 7766257 - 7767690 + | protease SCO6996 7767762 - 7768337 + | RNA polymerase sigma factor SCO6997 7768334 - 7768825 + | hypothetical protein SCO6998 7770083 - 7768860 - | cytochrome P450 SCO6999 7770960 - 7770163 - | hypothetical protein TERM 2449 7771035 - 7770997 - R 100 -23.2 -3.00022 | overlap 7771025 GGGACGGCAGACAGA CGGACACCCCGCCTCCGC CGA ACGGAAACGGGGTGCCCG TGGGGTGCGCGGGGC SCO7000 7773279 - 7771060 - | isocitrate dehydrogenase SCO7001 7774443 - 7773382 - | integral membrane protein SCO7002 7776130 - 7774616 - | amino acid/metabolite permease SCO7003 7777172 - 7776162 - | hypothetical protein TERM 2450 7777278 - 7777300 + H 73 -14.2 -3.36823 | opp_overlap 7777280 7777282, overlap 7777274 7777280 GGTCGGCGCACACTA TAGAGGCGGA GGT TCCGCCTCTG TTCGCTTTTGCCACA TERM 2451 7777280 - 7777298 + H 73 -14.6 -3.25113 | opp_overlap 7777280 7777282, overlap 7777278 7777274 TCGGCGCACACTATA GAGGCGGA GGT TCCGCCTC TGTTCGCTTTTGCCA TERM 2452 7777298 - 7777280 - H 70 -14.6 -2.85351 | opp_overlap 7777280 7777278 7777274, overlap 7777282 TCGGCGCACACTATA GAGGCGGA GGT TCCGCCTC TGTTCGCTTTTGCCA SCO7004 7777445 - 7778884 + | carbohydrate kinase SCO7005 7778881 - 7780284 + | oxidoreductase SCO7006 7780281 - 7781531 + | oxidoreductase SCO7007 7782447 - 7781548 - | integral membrane protein SCO7008 7782661 - 7784535 + | ABC transporter ATP-binding protein SCO7009 7786367 - 7784586 - | hypothetical protein SCO7010 7788084 - 7786480 - | alpha glucosidase SCO7011 7789104 - 7788229 - | membrane transport protein SCO7012 7790082 - 7789123 - | binding protein dependent transport protein SCO7013 7791565 - 7790150 - | sugar-binding lipoprotein SCO7014 7792730 - 7791717 - | LacI family transcriptional regulator TERM 2453 7792778 - 7792734 - R 82 -14.4 -3.85698 | gap 1, overlap 7792718 7792739 7792761 TCGTCGCGTCACAAA CGCAAGACTAGCGCAAGTCTC GCAA GAGACTTGCGCCAGTCA-GTG GCCTGTCCGACAACA TERM 2454 7792774 - 7792739 - R 100 -22.8 -3.32997 | overlap 7792718 7792734 7792761 GCGTCACAAACGCAA GACTAGCGCAAGTCTC GCAA GAGACTTGCGCCAGTC AGTGGCCTGTCCGAC SCO7015 7797124 - 7792823 - | secreted glycosyl hydrolase SCO7016 7798381 - 7797371 - | LacI family transcriptional regulator SCO7017 7799325 - 7798420 - | hypothetical protein SCO7018 7800083 - 7801600 + | hypothetical protein SCO7019 7804737 - 7801756 - | secreted alpha-amylase SCO7020 7805118 - 7806638 + | secreted alpha-amylase SCO7021 7807021 - 7808124 + | secreted protein SCO7022 7808129 - 7809061 + | hypothetical protein SCO7023 7809224 - 7810459 + | hypothetical protein SCO7024 7810502 - 7811068 + | acetyltransferase SCO7025 7812095 - 7811193 - | LysR family transcriptional regulator SCO7026 7812182 - 7812625 + | hypothetical protein TERM 2455 7812791 - 7812832 + T 82 -19.3 -2.63596 | gap 1 ACCCTCGTCAGGCGT CCGCGCCGCCGGGCGCCGCC GCG GACC-CGCCCGGCGGCGCCG TGCTCTGCCGTACGA SCO7027 7813802 - 7812783 - | LacI family transcriptional regulator SCO7028 7813971 - 7815275 + | sugar-binding lipoprotein TERM 2456 7815342 - 7815387 + G 75 -13.1 -3.6502 | gap 1, opp_overlap 7815336 CCGCAAGGAGTCCCG GCGGCGGCCGCCCGCC-CCGTC CAC GACGACGGTGGGCCGCCCCAGC TTTGCCTGGGCGGTG SCO7029 7815286 - 7816242 + | binding-protein-dependent transport protein SCO7030 7816239 - 7817057 + | binding-protein-dependent transport protein SCO7031 7817054 - 7819447 + | beta-D-xylosidase SCO7032 7820142 - 7819501 - | hypothetical protein SCO7033 7821806 - 7820139 - | regulatory protein SCO7034 7821937 - 7823205 + | aminotransferase (fragment) SCO7035 7823274 - 7824713 + | succinate-semialdehyde dehydrogenase SCO7036 7824771 - 7826216 + | argininosuccinate synthase TERM 2457 7826254 - 7826289 + F 100 -30.6 -3.35798 | GCCCCGCACCGGCAA GGGCCGGCTCGACACC CGAG GGTGTCGAGCCGGCCC TTCTGCGTGCCCCGT SCO7037 7826610 - 7830005 + | secreted protein TERM 2458 7830091 - 7830053 - T 100 -23 -3.57144 | overlap 7830002 7830054 CCGGTCACCGGGAAA CCGCCCGGCGGCGCGGAG CAC CACCGCGCCGCCGGGCTT CCGCCGCACCCGGGA TERM 2459 7830090 - 7830054 - T 95 -26.5 -2.74144 | overlap 7830002 7830053 CGGTCACCGGGAAAC CGCCCGGCGGCGCGGAG CAC CACCGCGCCGCCGGGCT TCCGCCGCACCCGGG SCO7038 7832324 - 7830042 - | integral membrane protein SCO7039 7832713 - 7832321 - | ABC transporter ATP-binding protein SCO7040 7834235 - 7832790 - | glyceraldehyde-3-phosphate dehydrogenase SCO7041 7834447 - 7834857 + | hypothetical protein TERM 2460 7834876 - 7834905 + T 82 -17.8 -3.21099 | CGAGGCCGGGGCGAA GGCCCGCGCCCC CGGTCA GGGGCGGGGGCC TTCGTCGTCGCCGAG SCO7042 7835298 - 7834891 - | MarR family transcriptional regulator SCO7043 7835383 - 7835715 + | hypothetical protein ccrB 7835928 - 7836392 + | camphor resistance protein CrcB SCO7045 7836389 - 7836733 + | hypothetical protein ccrB 7836730 - 7837104 + | camphor resistance protein CrcB uppP 7837144 - 7837980 + | undecaprenyl pyrophosphate phosphatase SCO7048 7839046 - 7838003 - | delta fatty acid desaturase SCO7049 7839207 - 7840130 + | glutaminase SCO7050 7841403 - 7840162 - | D-alanyl-D-alanine carboxypeptidase rho 7842710 - 7841463 - | transcription termination factor Rho SCO7052 7843300 - 7842905 - | hypothetical protein SCO7053 7844103 - 7843684 - | hypothetical protein SCO7054 7844184 - 7844771 + | hypothetical protein SCO7055 7844776 - 7845501 + | methyltransferase SCO7056 7846272 - 7845511 - | GntR family transcriptional regulator SCO7057 7847365 - 7846397 - | esterase TERM 2461 7846744 - 7846783 + g 72 -17.1 -2.82516 | gap 1, opp_overlap 7846733 7846734 GGAACGGCACGTCCG GCGCGACGGCGGCCAGGT CTCGC ACCAGGCCGCCGAC-CGC TATCGTGATGCCGCC SCO7058 7848067 - 7847483 - | integral membrane protein SCO7059 7848921 - 7848220 - | oxidoreductase SCO7060 7849600 - 7848995 - | hypothetical protein SCO7061 7850187 - 7849651 - | MarR family transcriptional regulator SCO7062 7850449 - 7851291 + | methylase SCO7063 7853389 - 7851281 - | hypothetical protein SCO7064 7853666 - 7854562 + | secreted protein TERM 2462 7854549 - 7854595 + F 74 -4.1 -4.49981 | gap 1, opp_overlap 7854541, overlap 7854550 7854569 7854576 GCAAGACGTACCGGT TCACCCGGGGCTGACCCGGCCC CTTC GCGCCGGGCC-GCCGGTGGTGC TTTTCTGGTGGTATC SCO7065 7854655 - 7855026 + | hypothetical protein TERM 2463 7855054 - 7855095 + F 95 -26.1 -2.62184 | opp_overlap 7855089, overlap 7855047 7855036 7855044 GCGCCGGTGTGGCGT GCGCCGCGTCTTTGTGCAA CTAG TTGCACAAAGACGCGGCGG TCCTCTACAACAGAG SCO7066 7855137 - 7857152 + | 2,4-dienoyl-CoA reductase (NADPH) SCO7067 7857217 - 7857768 + | hypothetical protein SCO7068 7858376 - 7857789 - | secreted protein SCO7069 7859510 - 7858527 - | secreted hydrolase SCO7070 7859605 - 7860771 + | hypothetical protein SCO7071 7861221 - 7860829 - | hypothetical protein SCO7072 7861831 - 7861232 - | hypothetical protein SCO7073 7862873 - 7861881 - | hypothetical protein SCO7074 7863191 - 7863367 + | hypothetical protein TERM 2464 7863391 - 7863379 - f 75 -10.5 -3.91911 | CTGATCCGAACGAAA CCGCC TAG GGCGG CGCGGGAGGGCAACT SCO7075 7863791 - 7864483 + | two component response regulator protein TERM 2465 7864515 - 7864490 - g 70 -12.5 -3.40403 | gap 1, opp_overlap 7864489 7864492 CCTCCGTGAGCAGAA CCGCCGGC-CGG GGG CCGCGCCGGCTG ATTCGATGGTGGCGT SCO7076 7864480 - 7865931 + | two-component histidine kinase TERM 2466 7866130 - 7866094 - T 100 -18.7 -4.25104 | opp_overlap 7866097, overlap 7866095 TCGGGCCCACGAAAA GGATCCGGGACGAGGCC TGG AGCCGCGTCCCGGATCT CGTCCGTGCCGGCGC TERM 2467 7866129 - 7866095 - T 93 -22.2 -3.14848 | opp_overlap 7866097, overlap 7866094 CGGGCCCACGAAAAG GATCCGGGACGAGGCC TGG AGCCGCGTCCCGGATC TCGTCCGTGCCGGCG TERM 2468 7866097 - 7866127 + T 79 -18.3 -2.80816 | opp_overlap 7866095 7866094 GGCCCACGAAAAGGA TCCGGGACGAGGC CTGGA GCCGCGTCCCGGA TCTCGTCCGTGCCGG SCO7077 7868298 - 7866148 - | integral membrane protein TERM 2469 7867601 - 7867548 - G 70 -2.3 -4.4261 | gap 1, opp_overlap 7867551 CGCCGAACACCAAAA TCGTCAGCAGCGCCGAGTTC-TGGTC GTT GACCACGATGCCGAAGCCCTTGACGA GCAGGTATACGGTCC SCO7078 7869120 - 7868683 - | insertion element transposase (fragment) SCO7080 7870519 - 7869683 - | insertion element transposase TERM 2470 7869862 - 7869889 + g 76 -6.2 -4.38154 | gap 1, overlap 7869862 GTTCCCACTGCTCGA CC-CTGCCGGG CAGTGCT CCCGGCCGCGG TTTTCTGGGCGGTGT SCO7081 7871921 - 7870734 - | phospholipase SCO7082 7872507 - 7872043 - | hypothetical protein SCO7083 7872801 - 7872697 - | insertion element transposase (fragment) SCO7084 7872834 - 7872977 + | hypothetical protein SCO7085 7873167 - 7873427 + | hypothetical protein SCO7086 7873947 - 7873600 - | MerR family transcriptional regulator SCO7087 7874908 - 7873970 - | oxidoreductase SCO7088 7876051 - 7875374 - | two-component system response regulator SCO7089 7877241 - 7876048 - | two-component system sensor kinase TERM 2471 7877317 - 7877283 - R 90 -21.4 -2.88544 | opp_overlap 7877273, overlap 7877308 GTTCAGGGTGACAGA CGCGCCGCGGCACCGT CGA AAGGCACCGCGGCGCG TATGACTGCACTCTG SCO7090 7879581 - 7877335 - | integral membrane protein SCO7091 7880010 - 7879864 - | hypothetical protein SCO7092 7880228 - 7881130 + | secreted protein TERM 2472 7881313 - 7881344 + F 86 -18.8 -3.18582 | opp_overlap 7881313 CGGTTCGACAGTGAA GAGGGGGCGGAAGC GGTT GCTTTCGTCCCCTC TTCGTCAATCCGATC SCO7093 7881841 - 7884639 + | transcriptional regulator SCO7094 7885962 - 7884751 - | flavohemoprotein SCO7095 7887082 - 7886126 - | hydrolase SCO7096 7887321 - 7887665 + | membrane protein SCO7097 7888284 - 7887694 - | MarR family regulatory protein TERM 2473 7888498 - 7888547 + r 75 -15.8 -3.00525 | overlap 7888494 AGCCTGGCGGGGGTA CTGTGCCCCGGGCGCCCAC-CG ATCCCCCG CGAGTCGGCGTCCGGGGC-CAG TCTCGTTTGGCCGCA SCO7098 7889113 - 7888577 - | hypothetical protein SCO7099 7890168 - 7889266 - | RNA polymerase sigma factor SCO7100 7890426 - 7891208 + | oxidoreductase SCO7101 7891305 - 7892660 + | dehydrogenase SCO7102 7893258 - 7892704 - | hypothetical protein SCO7103 7893752 - 7893453 - | hypothetical protein SCO7104 7894195 - 7895073 + | RNA polymerase sigma factor SCO7105 7896021 - 7895116 - | RNA polymerase sigma factor SCO7106 7896424 - 7896690 + | hypothetical protein SCO7107 7897409 - 7896813 - | hypothetical protein TERM 2474 7897473 - 7897438 - R 90 -21.2 -2.78384 | gap 1, opp_overlap 7897437, overlap 7897468 CTTTCTGTGACGAGA GGGGCCTGCCGCGCCGC GGT GCGG-ACGACAGGCCCC CTGTGGTGGGTGCGG SCO7108 7898264 - 7897518 - | hypothetical protein SCO7109 7900149 - 7898419 - | oxidoreductase TERM 2475 7899372 - 7899409 + g 72 -14.7 -3.36968 | overlap 7899402 GCAGGATGCCGCCCT CACCGCGGGCGGCCTCG CTGA CCAGGGTGCCCGCGGCG TTCTCCGGTTCGATG TERM 2476 7900158 - 7900202 + H 78 -11.4 -3.89346 | gap 1 GAGGCACGCTTGCTC CCGTCGCTCTGGGTGGTCACT GACT AG-GACCACGTCGGGCGGCGG TTTGTGACATCGGCG SCO7110 7900323 - 7900712 + | ferredoxin TERM 2477 7900701 - 7900751 + T 72 -16.2 -2.83715 | gap 1 GACGCGGATCTGTGG TTCCCCTCCTGACCGGCCGCCGC CACCGA GCG-TGCCCGGTCAGGAGGCGAG TGTGATGGTCGTGGG SCO7111 7901153 - 7900740 - | hydroperoxide resistance protein SCO7112 7902256 - 7901360 - | ECF family RNA polymerase sigma factor TERM 2478 7902657 - 7902703 + G 72 -12 -3.61398 | overlap 7902659 7902690 CGGCCATGGCGGCGA TGCCCTGGAGTCCCGGCCCGCC CCT GTCCGGCCGGGCCGCCACGGTG TTCTTCGCCGCCGCC TERM 2479 7902659 - 7902701 + G 72 -14.6 -3.38812 | overlap 7902657 7902690 GCCATGGCGGCGATG CCCTGGAGTCCCGGCCCGCC CCT GTCCGGCCGGGCCGCCACGG TGTTCTTCGCCGCCG SCO7113 7902488 - 7903123 + | integral membrane protein SCO7114 7904521 - 7903130 - | hypothetical protein SCO7115 7905621 - 7904521 - | hypothetical protein SCO7116 7906456 - 7905713 - | hypothetical protein SCO7117 7907715 - 7906453 - | ferredoxin reductase SCO7118 7908628 - 7907864 - | hypothetical protein SCO7119 7908808 - 7909746 + | dehydrogenase SCO7120 7910084 - 7911703 + | ubiquinol-cytochrome C reductase cytochrome B subunit TERM 2480 7911804 - 7911786 - f 76 -8.8 -4.24002 | overlap 7911787 7911796 7911797 TCTCAAAGGTGAAAA CGCGACAC AAC GTGCCGCA CACACCGATCACGAT SCO7121 7911841 - 7912686 + | secreted protein TERM 2481 7912706 - 7912729 + F 93 -19.6 -3.53012 | opp_overlap 7912706 GCACCGGTGATCGAA GGGCCGGTGG TTCG CCACCGGCCC TTTCCCGACCCCGCG TERM 2482 7912729 - 7912706 - f 85 -19.6 -3.05816 | opp_overlap 7912706 GCACCGGTGATCGAA GGGCCGGTGG TTCG CCACCGGCCC TTTCCCGACCCCGCG SCO7122 7912792 - 7913283 + | acetyltransferase TERM 2483 7913333 - 7913369 + T 95 -26.7 -2.70932 | opp_overlap 7913338, overlap 7913338 CCTCCGCCGCCAAGG GAAAAGCCGGTGCGGGC ATC GCCCGCACCGGCTTTCC TCGTTCACGCAGCGG TERM 2484 7913364 - 7913338 - T 100 -25.2 -4.27316 | opp_overlap 7913333 7913338 GCCGCCAAGGGAAAA GCCGGTGCGGGC ATC GCCCGCACCGGC TTTCCTCGTTCACGC TERM 2485 7913338 - 7913364 + T 100 -25.2 -3.84246 | opp_overlap 7913338, overlap 7913333 GCCGCCAAGGGAAAA GCCGGTGCGGGC ATC GCCCGCACCGGC TTTCCTCGTTCACGC SCO7123 7914627 - 7913374 - | acyltransferase aceE 7917424 - 7914737 - | pyruvate dehydrogenase subunit E1 SCO7125 7918281 - 7917541 - | hypothetical protein SCO7126 7918561 - 7919013 + | hypothetical protein TERM 2486 7919035 - 7919091 + T 100 -31 -2.85508 | gap 2, overlap 7919036 GTCGGGCACTCGCGA CGGGGCCCCGCACCCGTGA-C-ACCGGC CAG GCCGGGAGGTCACGGATGCGGGGCCCCG TCGTTGTGCGGTTTC SCO7127 7919627 - 7919133 - | hypothetical protein SCO7128 7921208 - 7919673 - | transmembrane efflux protein TERM 2487 7921304 - 7921342 + r 79 -15.8 -3.28712 | TCCGGCCGAGCTGCC GCCCGGCCGGAGCGGCTG CGT CAGCCGAACATGCCGGGC TTGTAACCACCCGCG SCO7129 7921794 - 7921324 - | hypothetical protein TERM 2488 7921992 - 7921961 - H 72 -15.8 -2.79133 | overlap 7921950 GAATGGCGCACCACA GCCCGCATACGGTG TGGT CACCGGGTGCGGGC GATAGCATCGAACGC SCO7130 7922097 - 7922885 + | hypothetical protein SCO7131 7922986 - 7923936 + | lipase SCO7132 7923955 - 7924674 + | hypothetical protein SCO7133 7924780 - 7925121 + | hypothetical protein SCO7134 7925356 - 7928127 + | transcriptional regulatory protein SCO7135 7928555 - 7928148 - | hypothetical protein SCO7136 7928742 - 7929485 + | hypothetical protein SCO7137 7932284 - 7929510 - | regulatory protein TERM 2489 7931110 - 7931076 - G 71 -14.9 -3.14132 | gap 1 CGCGTGGGCGAGGAA CGCGGCCGCCGCGGCG GTGC CGCCCC-GCGCCCGCG CCCGTCCGGCCGACG SCO7138 7932458 - 7932790 + | hypothetical protein SCO7139 7932929 - 7934395 + | aldehyde dehydrogenase SCO7140 7934492 - 7935322 + | DNA-binding protein SCO7141 7935958 - 7935350 - | hypothetical protein SCO7142 7936071 - 7936472 + | hypothetical protein SCO7143 7936673 - 7939486 + | transcriptional regulator SCO7144 7939618 - 7940355 + | ECF sigma factor SCO7145 7940566 - 7941048 + | transcriptional regulator SCO7146 7941058 - 7941408 + | regulatory protein SCO7147 7941649 - 7942416 + | ketoreductase SCO7148 7942508 - 7942861 + | hypothetical protein SCO7149 7942893 - 7943348 + | lyase SCO7150 7944414 - 7943578 - | acetyltransferase SCO7151 7944613 - 7945416 + | hypothetical protein SCO7152 7945453 - 7946277 + | hypothetical protein SCO7153 7946421 - 7947839 + | sugar transporter SCO7154 7948901 - 7947903 - | ketol-acid reductoisomerase SCO7155 7949234 - 7950301 + | hypothetical protein SCO7156 7950953 - 7950408 - | hypothetical protein SCO7157 7951531 - 7950950 - | integral membrane protein SCO7158 7951544 - 7953982 + | hypothetical protein SCO7159 7954049 - 7955986 + | integral membrane protein SCO7160 7956833 - 7956000 - | hypothetical protein SCO7161 7957625 - 7956843 - | 3-oxoacyl-[acyl-carrier protein] reductase SCO7162 7958647 - 7957724 - | oxidoreductase SCO7163 7959456 - 7958644 - | transferase TERM 2490 7959208 - 7959229 + g 72 -12.3 -3.62046 | gap 1 CGGCATGAACTGGAG GGTG-CGGGC CGG GCCCGTCACC TTGTTGCCGAGGTCC SCO7164 7961477 - 7959459 - | hypothetical protein SCO7165 7962390 - 7961479 - | sugar-binding integral membrane transport protein SCO7166 7963373 - 7962441 - | sugar-transporter integral membrane protein SCO7167 7964647 - 7963370 - | secreted sugar-binding protein TERM 2491 7964156 - 7964171 + g 73 -9 -4.02817 | overlap 7964138 CGGCTTGGTGATGCC GGCCTT CTCG AAGGCC TTCTTGTTGTAGAAG SCO7168 7964783 - 7965457 + | GntR family transcriptional regulator SCO7169 7965876 - 7965442 - | hypothetical protein SCO7170 7966015 - 7968375 + | secreted sugar hydrolase SCO7171 7968850 - 7968419 - | lyase TERM 2492 7969210 - 7969197 - g 71 -3.8 -4.44667 | overlap 7969193 GGCTGGAAGAAGAAA CTCG TCTCCG CGAG CCTCGTCGCGCTGGG SCO7172 7969170 - 7969406 + | hypothetical protein TERM 2493 7969424 - 7969470 + TF 100 -38.2 -2.52464 | GCTTCGGTTCACACC GTGACGCCGTCGGCCCACCGAC CCG GTCGGTGGGCCGACGGCGTCCC TCGCTTACGACCCCG SCO7174 7972637 - 7972368 - | hypothetical protein SCO7173 7969712 - 7972438 + | transcriptional regulator SCO7175 7972971 - 7973441 + | regulator SCO7176 7977242 - 7973481 - | secreted peptidase TERM 2494 7977395 - 7977362 - H 80 -9.5 -4.22652 | GGACACGATGCAAAA GGTGCATCGTCCCGC AAGC GCGACACACTGCACC GTGTGTAATACCAGT SCO7177 7977478 - 7978122 + | hypothetical protein SCO7178 7978110 - 7978478 + | transcriptional regulatory protein SCO7179 7980885 - 7978957 - | secreted amidase SCO7180 7981423 - 7981070 - | hypothetical protein SCO7181 7981617 - 7982402 + | branched amino acid transport system ATP-binding protein SCO7182 7982399 - 7983112 + | branched amino acid transport system ATP-binding protein SCO7183 7983160 - 7984032 + | branched amino acid transport system permease SCO7184 7984035 - 7985084 + | branched amino acid transport system permease SCO7185 7985081 - 7986271 + | branched amino acid binding secreted protein SCO7186 7986335 - 7986640 + | integral membrane protein SCO7187 7988690 - 7986672 - | lipoprotein TERM 2495 7988854 - 7988797 - R 79 -16.8 -3.05816 | opp_overlap 7988805 TCACCCGTTAGGGAA CGGCACGGCGGGCTACGGCCACGGGC TGCGCT GCCCGGAGCCGCAGCCCGTTGTCCTG CCGGGGTGACGTCGG TERM 2496 7988805 - 7988846 + r 86 -18.6 -3.40522 | opp_overlap 7988797 TAGGGAACGGCACGG CGGGCTACGGCCACGGGC TGCGCT GCCCGGAGCCGCAGCCCG TTGTCCTGCCGGGGT SCO7188 7992590 - 7988871 - | secreted peptidase TERM 2497 7991705 - 7991763 + g 72 -14.5 -3.41602 | gap 1 TGCCGGCGGAGGCCG CACCGGTGCCGGCGATGGTGGACGCCAC GTGG GTGCCGTGC-CCGTCGCGGTCGTCGGTG TTCTCGTCCGGTACG SCO7189 7993154 - 7992891 - | hypothetical protein SCO7190 7993470 - 7994357 + | hypothetical protein TERM 2498 7994432 - 7994374 - T 84 -19.6 -2.87132 | gap 1 CGCCCCTCGCACACA TCCATC-GCAGGCACGGCCCCTCGGAA GCAACG TTCCGTGGGGCCGTGCCTGCCGGTCGG TGCCGGCACCGGCCG SCO7191 7995370 - 7994561 - | secreted protein TERM 2499 7995142 - 7995195 + g 73 -16 -3.02263 | gap 1, overlap 7995187 GAGAGTTCGACACGT CGACGACGACCGAGGCGCCTCGCAG TACCT CTGCCAGGC-CCTCGCCCGTCATCG TGTTGACGCCGGTGT SCO7192 7995629 - 7996294 + | sigma factor SCO7193 7996511 - 7997461 + | hypothetical protein SCO7194 7997836 - 7998651 + | polysaccharide biosynthesis protein SCO7195 7999371 - 7999105 - | hypothetical protein SCO7196 8000617 - 7999751 - | ion transport integral membrane protein TERM 2500 8000730 - 8000770 + r 100 -30.5 -3.14132 | CGTGGGCACGTTGAA CGGGCCCGTGCTCACCCAG GCG CGGGGTGGGCACGGGCCCG TTCCTGAGGAGCCGG SCO7197 8002337 - 8000799 - | amino acid transport integral membrane protein TERM 2501 8002019 - 8001978 - G 76 -15 -3.38272 | opp_overlap 8001982 CAGGATCATCCAGAA GGTGGCGCCGGGGCCGCC GATGGA GACGGCGACGGCGACACC GGCGATGTTGCCGAG SCO7198 8003086 - 8002667 - | regulatory protein SCO7199 8003564 - 8003169 - | membrane protein TERM 2502 8003341 - 8003318 - G 72 -13.8 -3.41229 | overlap 8003319 AGAGCCCCAGCAGAA CGGCGAGCGC GGCC GCGCCCGCCA GGATGCGTCCGAGGC SCO7200 8004116 - 8003571 - | hypothetical protein SCO7201 8004272 - 8004748 + | transcriptional regulator SCO7202 8004831 - 8005571 + | hypothetical protein SCO7203 8005671 - 8006447 + | integral membrane protein TERM 2503 8006555 - 8006598 + T 70 -13.2 -3.42574 | gap 1, overlap 8006550 8006558 CCGGGATGTTCCGGC TGCGGCCT-GTTCGTTGCCGG ACT CCGGCAACGAACTATGCCTGA TTGTGCTGCACTTCG TERM 2504 8006558 - 8006595 + T 84 -19.3 -2.86449 | gap 1, overlap 8006550 8006555 GGATGTTCCGGCTGC GGCCT-GTTCGTTGCCGG ACT CCGGCAACGAACTATGCC TGATTGTGCTGCACT SCO7204 8007340 - 8007146 - | hypothetical protein SCO7205 8007497 - 8008357 + | hydrolase SCO7206 8008499 - 8009599 + | membrane protein SCO7208 8010662 - 8010429 - | hypothetical protein SCO7207 8009646 - 8010506 + | membrane protein SCO7209 8010855 - 8010715 - | hypothetical protein SCO7210 8010973 - 8011434 + | hypothetical protein SCO7211 8013374 - 8011635 - | secreted glycosyl hydrolase SCO7212 8016281 - 8013393 - | secreted glycosyl hydrolase TERM 2505 8016439 - 8016454 + H 82 -4.6 -4.8622 | overlap 8016440 ACGTAACCCCTTCCG TGCGAG GACC CTCGCC TTTTTCCTTGCCGCG SCO7213 8017040 - 8017786 + | hypothetical protein SCO7214 8019021 - 8017954 - | integral membrane protein SCO7215 8019808 - 8019248 - | hypothetical protein SCO7216 8020184 - 8021290 + | FecCD-family membrane transport protein SCO7217 8021287 - 8022063 + | iron ABC transporter ATP-binding protein SCO7218 8022130 - 8023167 + | iron transport lipoprotein SCO7219 8023842 - 8023216 - | phosphoglycerate mutase SCO7220 8025947 - 8023944 - | hypothetical protein SCO7221 8027475 - 8026306 - | polyketide synthase SCO7222 8028512 - 8027802 - | TetR family transcriptional regulator TERM 2506 8028605 - 8028556 - H 70 -12.9 -3.31144 | overlap 8028559 GTTCCAGCTTGACAA GGACTGGAACGACGTTCCACC CTGGCCGT GCTGGAACGCCGTTCCAGGGC ACGTCGGTCCTGCCG TERM 2507 8028602 - 8028559 - H 76 -17.6 -2.83271 | overlap 8028556 CCAGCTTGACAAGGA CTGGAACGACGTTCCACC CTGGCCGT GCTGGAACGCCGTTCCAG GGCACGTCGGTCCTG SCO7223 8028659 - 8029780 + | monooxygenase SCO7224 8030377 - 8029922 - | integral membrane protein TERM 2508 8030329 - 8030359 + g 75 -3.9 -4.58283 | gap 1, opp_overlap 8030338, overlap 8030330 GCAGGCCTACGACGA TGCGGAAGAGCGCG ATCA CGTGCTCC-CTGCG TTTTTCCAGCGCTTC TERM 2509 8030636 - 8030666 + H 80 -18.5 -2.87132 | CGGCTCCGTCGCTAT GGTCTAGACCTGA AGTCG TCAGGTCTAGACC TGTATCCGAAAGGGG SCO7225 8030688 - 8031422 + | secreted chitinase TERM 2510 8031676 - 8031693 + G 73 -4.8 -4.40173 | gap 1, overlap 8031655 8031666 CGCCGGATCCGCGGC GGCG-GG CCTTT CCACGCC TTTTCAATTTCTCGT SCO7226 8031545 - 8031985 + | integral membrane protein SCO7227 8031982 - 8033013 + | secreted protein SCO7228 8034681 - 8033017 - | polysaccharide lyase TERM 2511 8033580 - 8033617 + g 70 -12.5 -3.41051 | CGACGGTGAGCTTGG CGGCGAAGCCGTCGGCG TCCT CGCCGTCGGAGTCGGCG TTGTCGTGCGACTCG TERM 2512 8034069 - 8034113 + g 70 -16.9 -2.66316 | overlap 8034065 TCCCGGACGCGCCGT CGCTGCCGCCCGGCGACACGT ACA GCGCGGAGCCGGACGGCGGCG TGGTGTCGTCGCCGG SCO7229 8035697 - 8034753 - | membrane protein SCO7230 8035811 - 8036500 + | two-component system response regulator TERM 2513 8037885 - 8037928 + G 81 -19.4 -3.04792 | opp_overlap 8037873 8037877 8037874 GAACGTACGCCTGCA CGGCGGCACCGTCCGGGCGG CCAA CCACCCGGAGGGCGGCGCCG TCTTCACGGTCGTCC SCO7231 8036497 - 8038008 + | two-component system sensor kinase SCO7232 8038005 - 8038640 + | secreted protein SCO7233 8038819 - 8041623 + | secreted protein TERM 2514 8041817 - 8041789 - g 72 -13.7 -3.31931 | overlap 8041783 GGACAGAAGGACGAA GTCGCCGCGCCGG ACC CCGGCTCGGCAGC GGACGAACCGCACGC SCO7234 8041721 - 8043442 + | cytochrome C oxidase polypeptide I SCO7235 8043439 - 8043849 + | integral membrane protein SCO7236 8045489 - 8043825 - | ubiquinol-cytochrome C reductase cytochrome subunit B TERM 2515 8045447 - 8045470 + g 91 -21 -3.46602 | GTTCGGCCGCGTGGC GGGCCCGCGC ACCG GCGCGGGCCC TTCTCCTCTGCAACA SCO7237 8045923 - 8045564 - | secreted protein TERM 2516 8045782 - 8045798 + g 77 -9.3 -4.09685 | CCTCGGGACGGGGCG GCGGCGG CTC CCGGCGC TTTTGCCGGCTGCCG SCO7238 8046083 - 8046460 + | hypothetical protein SCO7239 8046501 - 8047403 + | hypothetical protein SCO7240 8047425 - 8049662 + | serine/threonine-protein kinase SCO7241 8049672 - 8051294 + | oxidoreductase SCO7242 8051378 - 8051503 + | hypothetical protein SCO7243 8053336 - 8051543 - | secreted protein SCO7244 8053492 - 8055009 + | acyl-CoA synthetase SCO7245 8055078 - 8055983 + | hydrolase SCO7246 8056020 - 8056262 + | hypothetical protein SCO7247 8056347 - 8057249 + | hypothetical protein SCO7248 8057268 - 8057888 + | hypothetical protein TERM 2517 8058414 - 8058427 + G 71 -8.1 -4.07687 | CGCCCTGCTGAAGCC GCTCC CGGC GGAGC TTTTCCAGCAGGGCT SCO7249 8057947 - 8058444 + | hypothetical protein SCO7250 8060385 - 8058466 - | hypothetical protein TERM 2518 8060670 - 8060634 - R 100 -25.2 -4.3586 | opp_overlap 8060628 GGACGGACACGAAAA GCGCGGTGCGCCCCCC GCTCG GAGGGGCACACCGCGC ACCGTCGTCCTCTCG SCO7251 8061733 - 8060696 - | hypothetical protein TERM 2519 8060922 - 8060912 - G 71 -8.2 -3.96624 | CAGGTTCACCAGAAA CGCG TCG CGCG CGGCCGTGCCCGTCG SCO7252 8062135 - 8063643 + | regulatory protein SCO7253 8064979 - 8063663 - | hypothetical protein SCO7254 8066280 - 8065252 - | myo-inositol dehydrogenase TERM 2520 8066064 - 8066024 - G 77 -12.6 -3.73072 | AAGGCGGCCAGCAAA GCC-TCCTCGTGCGCCTCGC CGG GCGAGGCGATC-AGGACGGC CTCGACACCCGGCGC SCO7255 8067498 - 8066404 - | hypothetical protein SCO7256 8069211 - 8067580 - | protease (secreted protein) TERM 2521 8069975 - 8069924 - g 87 -20.1 -3.17688 | gap 1, overlap 8069915 CAACGAGTCGACGAA CGACTCCGGCGACCACCCGGAGCC CGTAC GGCCCCCGGCGGA-GCCGGAGCCG TCCGCCCCGGAGGAG SCO7257 8069445 - 8070158 + | secreted protein SCO7258 8070691 - 8070206 - | hypothetical protein SCO7259 8070834 - 8071793 + | hypothetical protein SCO7260 8072074 - 8071805 - | membrane protein TERM 2522 8072153 - 8072194 + r 85 -20.2 -2.61274 | overlap 8072153 CGTCGGAGGCGGCAC GGGCGACGGGCCGG-CCCGC GGGT GCGGGACCGGCCCGT-GCCG CTTCCTTCCGGTGCG TERM 2523 8072153 - 8072195 + r 91 -20 -3.35992 | gap 3, overlap 8072153 CGTCGGAGGCGGCAC G-GGCGACGGGCCGG-CCCGC GGGT GCGGGACCGGCCCGT-GCCGC TTCCTTCCGGTGCGT SCO7261 8072654 - 8072211 - | hypothetical protein TERM 2524 8072937 - 8072911 - H 78 -12.3 -3.95435 | gap 1, overlap 8072906 GTCCCGAAAAGAGAA CCCT-GGCGGCC GGCC GACCGCCCAGGG CCACGAGATGGTCCC SCO7262 8072945 - 8073109 + | hypothetical protein SCO7263 8073282 - 8074172 + | chitinase SCO7264 8074183 - 8075100 + | oxidoreductase SCO7265 8076074 - 8075475 - | hypothetical protein TERM 2525 8076010 - 8076022 + g 77 -9.1 -4.18197 | AGCAGTGCGAGGCCG TCCGG TCC CCGGA TTTTCCGTCGGACCT SCO7266 8076808 - 8076071 - | 3-oxoacyl-[acyl-carrier protein] reductase TERM 2526 8076348 - 8076381 + g 77 -17.5 -3.04144 | gap 1 GCGCCCTTGCTGGCA GCGTACGGCCCGATGC CCG GCA-CGGGCCGTACGG TGTTCAGGGTGGAGA SCO7267 8077041 - 8077436 + | hypothetical protein SCO7268 8077471 - 8078550 + | adenosine deaminase SCO7269 8079047 - 8078532 - | hypothetical protein SCO7270 8079972 - 8079088 - | transcriptional regulator SCO7271 8080134 - 8081093 + | ion channel subunit TERM 2527 8081117 - 8081155 + T 100 -26.8 -3.07043 | CGGACGCGACGCGCA CGGCGGTTCCGGAGGCGT ACG GCGCCTCCTGAACCGCCG TCTTCGCGTCGTCCG SCO7272 8081558 - 8081175 - | isomerase SCO7273 8081893 - 8082303 + | hypothetical protein SCO7274 8083531 - 8082329 - | hypothetical protein SCO7275 8084169 - 8083750 - | hypothetical protein SCO7276 8084750 - 8084166 - | hypothetical protein TERM 2528 8085396 - 8085340 - g 85 -18 -3.53012 | GTGCCGGTCGGCAAA CGGGTACGCGCGGTGGTGCCCCTCA-CC GAA GGCTGACGGGCACCACCGCGCGG-CAGG GGCTCAGGCGCAGCC SCO7277 8084920 - 8085375 + | regulator protein SCO7278 8086287 - 8085400 - | RNA polymerase sigma factor SCO7279 8086495 - 8086968 + | DNA-binding protein SCO7280 8087622 - 8087020 - | ATP-dependent Clp protease proteolytic subunit 2 SCO7281 8088277 - 8087624 - | ATP-dependent Clp protease proteolytic subunit 1 TERM 2529 8088348 - 8088358 + H 74 -2.4 -4.64766 | overlap 8088339 8088338 GGGTGTGCGGCCGAA CGGC GCC GCGG TTTTTCCACTCTCGG SCO7282 8088496 - 8088978 + | DNA-binding protein SCO7283 8089106 - 8089903 + | hydroxylase SCO7284 8089935 - 8090642 + | ribonuclease H TERM 2530 8091735 - 8091684 - g 70 -13.7 -3.21099 | gap 2 CTCGCCCACTACGAA CGCGAACGCCGGGCGGCCCTGCTGC CGGT GCAG-AGCGCGGCCCGGC-TCAGCG CCCAGTGGTACGAGA SCO7285 8090745 - 8092010 + | hydroxylase SCO7286 8092023 - 8093006 + | oxidoreducatse SCO7287 8093387 - 8093034 - | hypothetical protein SCO7288 8093542 - 8094045 + | membrane protein SCO7289 8094562 - 8094134 - | regulator SCO7290 8095633 - 8094656 - | dehydrogenase SCO7291 8097306 - 8095690 - | serine/threonine protein kinase TERM 2531 8097446 - 8097421 - R 75 -12.5 -3.61517 | gap 1 ACCCTTCTTCAAGAA CCGGGGCC-GTC CGG GGCAGGCCCCGG CCCGACGTCAGCGCA SCO7292 8098413 - 8097454 - | threonine dehydratase SCO7293 8099116 - 8098439 - | hypothetical protein SCO7294 8100432 - 8099128 - | hypothetical protein SCO7295 8103490 - 8100524 - | LuxR family transcriptional regulator SCO7296 8103910 - 8103557 - | hypothetical protein SCO7297 8105400 - 8103907 - | two-component sensor histidine kinase SCO7298 8107073 - 8105397 - | thioredoxin reductase TERM 2532 8106416 - 8106381 - G 73 -15.4 -3.30441 | gap 1 CACCAGGTCGTAGAA GTCCGAGGTGGGCGTGG TCG CCAGGCCCACC-CGGGC CGCCAGCTCGGGCGC SCO7299 8107218 - 8108156 + | stress-inducible protein SCO7300 8109405 - 8108173 - | hypothetical protein SCO7301 8110161 - 8109415 - | hypothetical protein SCO7302 8110872 - 8110240 - | hypothetical protein SCO7303 8111066 - 8111647 + | TetR family transcriptional regulator SCO7304 8111687 - 8113360 + | putative FAD-binding dehydrogenase SCO7305 8113747 - 8113394 - | hypothetical protein SCO7306 8114060 - 8113809 - | regulatory protein SCO7307 8115087 - 8114185 - | chromosome replication initiation inhibitor protein SCO7308 8115165 - 8115779 + | membrane transport protein TERM 2533 8117081 - 8117117 + G 89 -23 -2.83715 | gap 1 ACGGCGGCGCGGGCT CCGCCGCCGGCGCCCGG GAGG CCGTG-GCCGGCGGCGG TCTGCTCGTCGTGGC SCO7309 8115853 - 8117187 + | membrane transport protein SCO7310 8117650 - 8117195 - | regulatory protein TERM 2534 8117832 - 8117801 - R 100 -18.7 -4.7373 | CGAGGGCATGAAAAA GCCCTGGCCGGAC GGGGGA GGCCGGCCAGGGC CGTAAGCGGTGACCG SCO7311 8119483 - 8118005 - | amino acid decarboxylase SCO7312 8119746 - 8119513 - | hypothetical protein SCO7313 8119902 - 8120348 + | hypothetical protein SCO7314 8120541 - 8121440 + | RNA polymerase sigma factor SCO7315 8121460 - 8121699 + | hypothetical protein SCO7316 8121760 - 8122602 + | integral membrane protein SCO7317 8122631 - 8123065 + | hypothetical protein SCO7318 8125347 - 8123089 - | hypothetical protein TERM 2535 8125318 - 8125271 - G 74 -16.8 -3.07895 | opp_overlap 8125276, overlap 8125251 8125250 GTCAGCCGCAACAGA CCCGGGTCGGACGCGGCGACGC GGTC GCGCAGCCGTGTCCGCGCCGAG CGTCCCGCTGCCTTC SCO7319 8126915 - 8125470 - | oxidoreductase SCO7320 8128797 - 8127055 - | hypothetical protein SCO7321 8129858 - 8128794 - | hypothetical protein SCO7322 8130298 - 8129858 - | anti-sigma factor SCO7323 8130729 - 8130298 - | anti-sigma factor antagonist SCO7324 8131625 - 8130726 - | regulatory protein SCO7325 8132178 - 8131786 - | anti-sigma factor antagonist TERM 2536 8132237 - 8132194 - R 100 -24.6 -3.63515 | gap 1, opp_overlap 8132196 GTGTACCTCCAACAA CGCGGCGGCGCGGCGGGCC GTCGTGT GGTCCGCCGCGCCGCC-CG GATACCCCCGGATCC SCO7326 8134770 - 8132296 - | hypothetical protein SCO7327 8138762 - 8134767 - | two-component system sensory histidine kinase SCO7328 8139467 - 8139033 - | regulatory protein TERM 2537 8139470 - 8139501 + r 75 -13.6 -3.48466 | gap 1, overlap 8139474 8139484 ACTCGGCTGCCATTG CGCCTTCCCGGCCCG GCA CGGGCCGGGC-GTCG TTCCTTCCTTCTCCT TERM 2538 8139474 - 8139498 + r 70 -14.9 -2.87756 | overlap 8139470 8139484 GGCTGCCATTGCGCC TTCCCGGCCCG GCA CGGGCCGGGCG TCGTTCCTTCCTTCT TERM 2539 8139607 - 8139560 - R 81 -19 -2.52464 | TGCGGGCCGAACCTA GTCGCGCCGGTGTGCCGGGCCG GGGA CGGGCCGGCACACCGGTTCAGC GGAGGAACACGTTGT SCO7329 8141513 - 8139603 - | long-chain-fatty-acid-CoA ligase SCO7330 8141668 - 8141904 + | membrane protein SCO7331 8143021 - 8141930 - | carboxylate-amine ligase SCO7332 8145319 - 8143094 - | glycogen branching enzyme SCO7333 8146684 - 8145323 - | hypothetical protein TERM 2540 8145557 - 8145500 - G 89 -19.8 -3.29144 | gap 2 GTAGCCCGCGCAGAA CGCCTCCCGGCAGCGGCGCGCCCACTCC GGGC GCCACGGGCG-GC-GCTGCCGGGCGGCG TAGTCGAAGGACCGC TERM 2541 8146645 - 8146616 - G 71 -15.1 -3.14564 | gap 1, opp_overlap 8146608, overlap 8146586 8146633 CCACTGGCGCAGCAA CTCGCCGAG-CGAC GAC ATCGGCTCGGCGAG CTGCCCGCGTCTCGT SCO7334 8148431 - 8146713 - | trehalose synthase SCO7335 8150437 - 8148428 - | alpha-amylase SCO7336 8150771 - 8150499 - | hypothetical protein SCO7337 8151064 - 8151579 + | hypothetical protein SCO7338 8151576 - 8153723 + | glycogen debranching enzyme SCO7339 8154562 - 8153726 - | hypothetical protein SCO7341 8155756 - 8154965 - | RNA polymerase secondary sigma factor SCO7340 8154652 - 8155017 + | hypothetical protein SCO7342 8156060 - 8156584 + | hypothetical protein SCO7343 8157545 - 8156604 - | porphobilinogen deaminase SCO7344 8158389 - 8157613 - | secreted protein SCO7345 8159511 - 8158531 - | ATP-dependent DNA ligase SCO7346 8161062 - 8159608 - | membrane transport protein SCO7347 8161299 - 8161964 + | hypothetical protein SCO7348 8162315 - 8162202 - | hypothetical protein SCO7349 8162506 - 8162393 - | hypothetical protein SCO7350 8163794 - 8162598 - | membrane efflux protein SCO7351 8163849 - 8164718 + | AraC family transcription regulator TERM 2542 8164948 - 8164972 + G 84 -14.9 -3.72324 | GCCGCGCACCCGCAG GGCCGCCGCGC TGA GTGCCGCGGCC TTCTTCGTCGGGGTG SCO7352 8164751 - 8165131 + | membrane protein SCO7353 8165128 - 8165595 + | hypothetical protein SCO7354 8165621 - 8168029 + | hypothetical protein SCO7355 8168703 - 8168062 - | hypothetical protein SCO7356 8169590 - 8168760 - | oxidoreductase TERM 2543 8170450 - 8170418 - g 79 -19.2 -2.79302 | ACTACGTCGAGCAGA TCGCCGGGCTCTCC CGCCC GGAGAGCGCGGCGA TCCTGGAACTCCTCG SCO7357 8169703 - 8170689 + | dioxygenase SCO7358 8172222 - 8170720 - | hypothetical protein TERM 2544 8171687 - 8171641 - G 70 -14.4 -3.28712 | gap 2 CGGCCGGTGCCACAA CAGGGACCGCAGCCACGCGCGG GTGAA CCG-GCGCGGC-GCGGCCTCCG GGGCGAGGGGCGGGG SCO7359 8173069 - 8172314 - | hydrolase SCO7360 8173721 - 8173119 - | hypothetical protein SCO7361 8173887 - 8175416 + | DNA-binding protein SCO7362 8176611 - 8175571 - | oxidoreductase SCO7363 8177471 - 8176680 - | oxidoreductase SCO7364 8178186 - 8177482 - | TetR family transcriptional regulator TERM 2545 8178095 - 8178133 + g 70 -13 -3.36289 | overlap 8178117 TCGCGGGTCTGCCGC GCCTTGCGCTGCCGCCGG TCC TCGGTGGCGGGGGAGGGC TTCGTTGCCGTCATG TERM 2546 8178185 - 8178171 - G 77 -10 -4.16943 | GCGTACACCTGAAAA TGTCCC AGT GGGACA TGTGACCCGTTGGGA SCO7365 8178292 - 8178615 + | hypothetical protein SCO7366 8178701 - 8179468 + | hypothetical protein SCO7367 8180842 - 8179502 - | membrane efflux protein TERM 2547 8179717 - 8179766 + g 75 -12.5 -3.62522 | CGGCGAGGACCTGGG CCGGCCCGGCGGGCGCGGCCAGC GGGA GCAGGGCGAGTACGGCGGGCAGG TTGTTGACGACGTTG TERM 2548 8179985 - 8179927 - G 81 -18.1 -3.2818 | overlap 8179925 CGAACAGGCAGAACA GCGGCGCGGCGGCGC-CCGCCATCTCCCG GGG CGTGACATGGCGGCGGGCCAGCGC-CCGC GCCCCGAGCACCAGC TERM 2549 8180134 - 8180094 - G 79 -13.8 -3.58522 | ACGACCACGGTGAAA CGGGGCACGGCGGGCGCG GGCGG CGCGGACGCCACGCCCGG CCCGGCACCGGGGGC SCO7368 8181049 - 8181612 + | hypothetical protein SCO7369 8182973 - 8181660 - | transmembrane transport protein SCO7370 8183344 - 8184384 + | NAD-dependent dehydratase SCO7371 8185071 - 8184508 - | hypothetical protein SCO7372 8185685 - 8185152 - | hypothetical protein SCO7373 8186332 - 8185841 - | hypothetical protein SCO7374 8188821 - 8186329 - | nitrate reductase NarB (fragment) TERM 2550 8186471 - 8186513 + g 86 -21.3 -3.01791 | gap 1, overlap 8186510 GGCGCCGGGGAGGGC CGTCCGCCCCCGCGCTCCAC GAGG GTG-AGCGCGGCGGCGGCCG TCTTGAACAGCGGCT SCO7375 8188898 - 8189692 + | acetyltransferase SCO7376 8190453 - 8189725 - | hypothetical protein SCO7377 8190707 - 8190450 - | hypothetical protein SCO7378 8191414 - 8190704 - | hypothetical protein SCO7379 8191562 - 8191873 + | hypothetical protein SCO7380 8193224 - 8191911 - | hypothetical protein SCO7381 8193260 - 8193673 + | hypothetical protein SCO7382 8194350 - 8194036 - | hypothetical protein SCO7383 8194767 - 8195147 + | hypothetical protein TERM 2551 8195355 - 8195388 + F 76 -16.7 -2.82516 | gap 1 CGGGGCGGCAGGAGG CGCCGCGGCCGGGATC CCC GAGTC-GGCCGCGGCG TATCCTCCTCGGGCC SCO7384 8195889 - 8197229 + | transmembrane transport protein SCO7385 8197385 - 8197828 + | integral membrane protein SCO7386 8199240 - 8198068 - | secreted serine protease SCO7387 8199503 - 8200009 + | hypothetical protein SCO7388 8200002 - 8201621 + | dehydrogenase SCO7389 8201665 - 8202543 + | short chain dehydrogenase SCO7392 8204060 - 8204551 + | hypothetical protein SCO7393 8205306 - 8204557 - | lipoprotein SCO7394 8205523 - 8206461 + | integral membrane protein SCO7395 8207990 - 8206425 - | membrane transport protein SCO7396 8209387 - 8208050 - | secreted protein SCO7397 8210141 - 8209545 - | hypothetical protein TERM 2552 8210168 - 8210180 + r 87 -6.9 -5.00616 | ACGGGGGCACGGATC CTGGG GCA CCCGG TTTTTTCGGCCCGGG SCO7398 8212285 - 8210201 - | iron-hydroxamate transporter permease subunit SCO7399 8213276 - 8212293 - | binding-protein-dependent transport lipoprotein SCO7400 8214151 - 8213273 - | ABC transporter ATP-binding protein SCO7401 8214824 - 8214255 - | hypothetical protein TERM 2553 8214852 - 8214876 + r 79 -13.5 -3.61398 | AGTGTGCTCGCGGAA CTGCCGGAAGC GCT GCCTCCGGCGG TTGTTGCACACGCAA SCO7402 8216082 - 8214910 - | lyase TERM 2554 8216224 - 8216206 - H 77 -17.4 -2.90763 | GGCATACGCGAGACA CGGCGCCG CTC CGGCGCCG CCGATCCGAAGGGAT SCO7403 8216238 - 8216423 + | hypothetical protein SCO7404 8217248 - 8216457 - | hypothetical protein SCO7405 8218007 - 8217360 - | acetyltransferase (fragment) SCO7406 8220176 - 8218101 - | secreted protein SCO7407 8222349 - 8220304 - | beta-galactosidase SCO7408 8223731 - 8222376 - | solute-binding lipoprotein SCO7409 8224777 - 8223827 - | binding-protein dependent transport protein SCO7410 8225711 - 8224785 - | binding-protein dependent transport protein TERM 2555 8226421 - 8226372 - g 71 -13.5 -3.53012 | gap 1, overlap 8226373 GCGGCCTCCCTCAAA CTGCCGCCGCACGTCCAGGTCGTC GTG GTCGACTCGGACGC-CGGCGACAC CTACACCGTCGTCGA TERM 2556 8226420 - 8226373 - g 70 -17 -2.71712 | gap 1, overlap 8226372 CGGCCTCCCTCAAAC TGCCGCCGCACGTCCAGGTCGTC GTG GTCGACTCGGACGC-CGGCGACA CCTACACCGTCGTCG SCO7411 8225904 - 8226962 + | LacI family transcriptional regulator SCO7412 8227072 - 8228874 + | pyruvate decarboxylase SCO7413 8228871 - 8229902 + | short chain dehydrogenase SCO7414 8230712 - 8229906 - | integral membrane protein SCO7415 8230865 - 8232022 + | racemase SCO7416 8232456 - 8232052 - | hypothetical protein SCO7417 8233778 - 8232555 - | cytochrome P450-family protein SCO7418 8235016 - 8233775 - | cytochrome P450-family protein SCO7419 8235564 - 8235013 - | ATP/GTP binding protein SCO7420 8235982 - 8235635 - | hypothetical protein SCO7421 8236386 - 8235979 - | hypothetical protein SCO7422 8238014 - 8236383 - | sensor histidine-kinase SCO7423 8238862 - 8238152 - | hypothetical protein SCO7424 8238961 - 8239428 + | MarR family transcriptional regulator SCO7425 8239425 - 8241158 + | multidrug-efflux transporter protein SCO7426 8241685 - 8241248 - | hypothetical protein SCO7427 8241835 - 8242281 + | hypothetical protein SCO7428 8242355 - 8243551 + | flavohemoprotein SCO7429 8243950 - 8243600 - | hypothetical protein SCO7430 8244126 - 8244812 + | hypothetical protein SCO7431 8245092 - 8244832 - | integral membrane protein SCO7432 8245909 - 8245226 - | secreted extracellular small neutral protease SCO7433 8246125 - 8247111 + | small neutral protease regulatory protein SCO7434 8247219 - 8247980 + | lipoprotein TERM 2557 8248002 - 8248033 + T 100 -21.6 -4.03078 | CCCTCCGGACAGCGA CGGGAGCAGCGGGC CGCG GCCCACTGCTCCCG TTTCTCATGTCCTCA SCO7435 8249322 - 8248054 - | transmembrane transport protein SCO7436 8250867 - 8249413 - | aldehyde dehydrogenase SCO7437 8252494 - 8250914 - | benzoylformate decarboxylase SCO7438 8252589 - 8253524 + | LysR family transcriptional regulator SCO7439 8253535 - 8254275 + | hypothetical protein SCO7440 8255261 - 8254317 - | hydrolase SCO7441 8255348 - 8255941 + | transcriptional regulatory protein SCO7442 8256100 - 8256564 + | hypothetical protein SCO7443 8256653 - 8258293 + | phosphoglucomutase SCO7444 8259604 - 8258333 - | cytochrome P450 (fragment) SCO7445 8259792 - 8260529 + | hypothetical protein SCO7446 8260631 - 8261071 + | regulator SCO7447 8262071 - 8261520 - | acetyltranferase SCO7448 8262207 - 8264150 + | hypothetical protein SCO7449 8264413 - 8265090 + | membrane protein TERM 2558 8265148 - 8265112 - f 82 -19.3 -2.62184 | opp_overlap 8265136, overlap 8265132 8265135 CCGGGCGCCATAGCA GCCGGGCCGCCACCCAG GAA CCACGGGGCGGCCCGGC TCGCCCCCGCCCACC SCO7450 8265291 - 8265896 + | secreted protein SCO7451 8266048 - 8267244 + | hypothetical protein SCO7452 8268311 - 8267283 - | O-methyltransferase SCO7453 8269446 - 8268376 - | secreted protein TERM 2559 8269790 - 8269833 + G 71 -15.8 -3.14132 | gap 1 CGCGGCCGCCCTCCT GAGCCGGCGCGCGCGGAGCCG GGG CGCCGCCGCGCGGGC-GGCCC TTCGTACCACGGACG SCO7454 8269590 - 8270384 + | hypothetical protein SCO7455 8270459 - 8270995 + | isochorismatase SCO7456 8271528 - 8271037 - | hypothetical protein SCO7457 8271969 - 8271571 - | hypothetical protein SCO7458 8272128 - 8272493 + | membrane protein SCO7459 8273529 - 8272690 - | ABC transporter ATP-binding protein SCO7460 8273736 - 8274806 + | lipoprotein SCO7461 8275533 - 8274847 - | hydrolase SCO7462 8276512 - 8275745 - | integral membrane protein SCO7463 8276830 - 8278032 + | sensor histidine kinase SCO7464 8278029 - 8278430 + | hypothetical protein SCO7465 8278427 - 8278804 + | hypothetical protein SCO7466 8278842 - 8279372 + | ATP/GTP-binding protein TERM 2560 8279578 - 8279607 + F 78 -11.4 -3.87815 | opp_overlap 8279576, overlap 8279579 CCGGCGCCGAAACCC CCGGTACCCGCC CCCCGA GGCGGGTATCGC TTTGTGCGGCTCCGG TERM 2561 8279579 - 8279606 + F 70 -14.9 -2.92475 | opp_overlap 8279576, overlap 8279578 CGGCGCCGAAACCCC CGGTACCCGCC CCCCGA GGCGGGTATCG CTTTGTGCGGCTCCG SCO7467 8279637 - 8280764 + | hypothetical protein TERM 2562 8280818 - 8280786 - T 100 -24.2 -3.53012 | CGTCCGCCCGCGAAA CAGGGCCCCCGGCG CGATC CGCCGGGAGCCCTG GGCGCGGTCACGGCC SCO7468 8282165 - 8280867 - | flavin-binding monooxygenase SCO7469 8283623 - 8282277 - | phenylacetate-CoA ligase SCO7470 8284132 - 8283620 - | phenylacetic acid degradation protein PaaI SCO7471 8284297 - 8285283 + | phenylacetate-CoA oxygenase subunit PaaA SCO7472 8285280 - 8285591 + | phenylacetate-CoA oxygenase subunit PaaB SCO7473 8285601 - 8286428 + | phenylacetic acid degradation protein PaaC SCO7474 8286425 - 8286937 + | phenylacetic acid degradation protein PaaD SCO7475 8286937 - 8288043 + | phenylacetic acid degradation NADH oxidoreductase PaaE TERM 2563 8288266 - 8288242 - T 72 -11.4 -3.64703 | opp_overlap 8288247 8288248 CCGGCCTGATCCAAA CGACACCCCC TAGGC GGGGTTGTCG CCGTGGGTGAGCGTC SCO7476 8289468 - 8288251 - | secreted protein SCO7477 8289725 - 8291218 + | hypothetical protein SCO7478 8292117 - 8291215 - | phosphotransferase SCO7479 8293314 - 8292151 - | integral membrane protein SCO7480 8293353 - 8293976 + | hypothetical protein SCO7481 8294552 - 8293977 - | hypothetical protein SCO7482 8294744 - 8295145 + | integral membrane protein SCO7483 8295316 - 8295723 + | hypothetical protein SCO7484 8295966 - 8295730 - | hypothetical protein SCO7485 8296649 - 8295963 - | oxidoreductase SCO7486 8297863 - 8296646 - | transcriptional regulator SCO7487 8298751 - 8297867 - | integral membrane binding protein dependent transport protein SCO7488 8299779 - 8298748 - | integral membrane binding protein dependent transport protein TERM 2564 8299675 - 8299642 - G 77 -16 -3.25823 | gap 1 GGTGGGGGAGACGAA CGCGAGTCCCGCGCG GTTGG CGCGCCGG-CTCGCG GTGAGCGGGCGGCGG SCO7489 8301216 - 8299813 - | binding protein dependent transport lipoprotein TERM 2565 8300084 - 8300129 + g 71 -15.3 -3.06162 | gap 1 CTGTGCCGCCAGGCG TCCAGGTAGCGCTCGGGCTCGG CGG CCGTGCCCTTGCGC-ACCGGGA TCTTGCCCTCGGGTG TERM 2566 8300986 - 8301003 + g 72 -11.3 -3.66178 | CTGCGGCATCTGCTT CTCGTCG ACCC CGACGAG TTTCACCTTGACGCC TERM 2567 8302182 - 8302208 + G 73 -15.1 -3.28712 | CTGCGCTCGGTCGCG GCCGGGGGCCG GGTGG TGGCCTCCGGC TTCTACCAGGGCGAC SCO7490 8301342 - 8302487 + | oxidoreductase SCO7491 8302514 - 8303314 + | hypothetical protein SCO7492 8303311 - 8304675 + | hypothetical protein TERM 2568 8306462 - 8306514 + G 71 -14.9 -3.05463 | gap 3, overlap 8306443 GGCCCACCACGGCCA CCGGCTGCCCGAGGTCCTCGC-CGGT TATG ACCGCGCGGCGACCGCGG-C-GCCGG TTCCCTACCCGCACT SCO7493 8304672 - 8306609 + | hypothetical protein SCO7494 8307055 - 8306615 - | hypothetical protein SCO7496 8308884 - 8308033 - | integral membrane protein SCO7497 8308924 - 8309703 + | transcriptional regulator TERM 2569 8309875 - 8309853 - T 70 -12.7 -3.28712 | gap 1 TCGGGCCGGCCACAA GGCACGGCCG GCCG CGGCCG-GCC TGATCCGAACGACAC SCO7498 8310544 - 8309894 - | transcriptional regulator SCO7499 8311394 - 8310669 - | racemase SCO7500 8312979 - 8311492 - | allantoin permease SCO7501 8313196 - 8314671 + | hydrolase SCO7502 8315715 - 8314675 - | LacI family transcriptional regulator TERM 2570 8315844 - 8315831 - H 74 -2.3 -4.67755 | ACATCGATGTAAAAA CAAGC CACC GCATG AGCTCCGGCCGTCGA SCO7503 8315906 - 8317243 + | extracellular solute-binding protein SCO7504 8317256 - 8318206 + | integral membrane binding-protein-dependent transport protein SCO7505 8318209 - 8319108 + | integral membrane binding-protein-dependent transport protein SCO7506 8319174 - 8320994 + | hydrolase SCO7507 8321994 - 8321047 - | dioxygenase SCO7508 8323140 - 8322307 - | hypothetical protein SCO7509 8324658 - 8323180 - | hypothetical protein TERM 2571 8324787 - 8324732 - R 84 -19 -2.79796 | gap 1, opp_overlap 8324743 GCGCACCCCACCAGA CGGGACGGGGACGGGGGTCCACCGCAC CGG ATGCGGTGGACCCCCGTCGCT-TCAGG TCCTCGTAGGGCTGA TERM 2572 8324743 - 8324777 + r 100 -27.3 -2.54193 | opp_overlap 8324732 CAGACGGGACGGGGA CGGGGGTCCACCGCA CCGGA TGCGGTGGACCCCCG TCGCTTCAGGTCCTC SCO7510 8325307 - 8324810 - | peptidyl-prolyl cis-trans isomerase SCO7511 8326355 - 8325357 - | glyceraldehyde 3-phosphate dehydrogenase SCO7512 8327448 - 8326492 - | AraC family transcription regulator SCO7513 8328367 - 8327480 - | secreted hydrolase SCO7514 8328549 - 8329049 + | integral membrane protein SCO7515 8329348 - 8329917 + | hypothetical protein SCO7516 8329972 - 8331888 + | heat shock protein 90 TERM 2573 8332021 - 8331977 - f 90 -20.8 -2.98823 | gap 1, opp_overlap 8332006 GGCCCGGCAGAGAGA GGCTCCACGCCGTC-CGCCAT CCGC ATGGCGAGACGGCGTGGCGTC CGGAGCCCGCTCCTC SCO7517 8332218 - 8333516 + | integral membrane protein SCO7518 8334140 - 8333583 - | TetR family transcriptional regulator SCO7519 8334732 - 8334151 - | sugar acetyltransferase SCO7520 8336018 - 8334804 - | integral membrane protein TERM 2574 8335558 - 8335502 - G 70 -13.7 -3.21924 | gap 3 CCACGGCGGACAAGA GCAGGTGC-GGGCCGCGCGCGACG-CCG AGCG CGATCGCCGCG-GCGGCCATGGACCCGC CGGTGACGGCGCCGA SCO7521 8337202 - 8336087 - | secreted peptidase SCO7522 8339560 - 8337389 - | DNA ligase TERM 2575 8339523 - 8339564 + g 77 -13.5 -3.75153 | opp_overlap 8339510 AACGGGTCCGCGCCG CCGCGCGGCGGCCGCTCCG CTTG CGGAGCCGCCGACATGGGG TTTCGGTTGAAGCGA TERM 2576 8339874 - 8339831 - g 78 -18.1 -3.14132 | gap 1 GTGGGCGGCCACGAA GGTCGA-GCCCGCGCGGGGG CTGCT CGCCCGGGCGGGCGCCGACC CCGACGCGCTCGCCT SCO7523 8339604 - 8342117 + | chaperone SCO7524 8342114 - 8342632 + | hypothetical protein SCO7525 8342696 - 8344990 + | oxidoreductase SCO7526 8345074 - 8346285 + | chloramphenicol resistance protein SCO7527 8347332 - 8346301 - | DeoR family transcriptional regulator TERM 2577 8347396 - 8347357 - H 72 -15.6 -2.79183 | gap 1 GCTACCTGCAGCAGA GTGGG-CACCGCGGGGCCG GAC CGGTCCCGCGACGGCCCGC ACCGCGGGGCCGTCC SCO7528 8347357 - 8347857 + | hypothetical protein TERM 2578 8348718 - 8348693 - g 73 -15.5 -3.28712 | gap 1, opp_overlap 8348715 GCCCGCCTTCGACAA CGCGGTCCTCGG CTA CC-AGGACCGCG GCCGGATCATCGACG SCO7529 8347854 - 8348954 + | hypothetical protein SCO7530 8350079 - 8348997 - | regulatory protein SCO7531 8351407 - 8350151 - | integral membrane protein TERM 2579 8350361 - 8350399 + g 70 -13.6 -3.18264 | opp_overlap 8350336 CACCGACACGGCGAG CAGCACCGCCGTGCGGGG AGC CCCCTCGCGGCCGAGCCG TTCCTCGCTCAGCAG SCO7532 8352350 - 8351511 - | secreted protein TERM 2580 8352046 - 8352028 - G 74 -17.4 -2.78463 | ATCTCGCCGACGACA CCGCCGCC GCC GGCGGCGG CCACCGACCTGAACG SCO7533 8352526 - 8353227 + | two-component system response regulator TERM 2581 8354648 - 8354688 + G 89 -21.8 -3.04144 | opp_overlap 8354634 8354633 CGCGGCCCTGCACGG CGGCACCCTCGCCGCGGC CAACC GCCCCGGCGGCGGTGCCG TCTTCACCCTCACCC SCO7534 8353224 - 8354738 + | two component system histidine kinase SCO7535 8354735 - 8355298 + | lipoprotein SCO7536 8355539 - 8357758 + | integral membrane protein SCO7537 8359128 - 8357815 - | aminotransferase TERM 2582 8358021 - 8357971 - G 87 -22.5 -2.72344 | CCCCAGCTCGAAGCA GCGCCGGGTGACGGCGGCGCCGA GCCGG TCCGCGCCGCCCTCGCCCAGCAC CTGGTCGCCGACCAG SCO7538 8359215 - 8360183 + | LysR family transcriptional regulator SCO7539 8360931 - 8360197 - | TetR family transcriptional regulator SCO7540 8361751 - 8361080 - | hypothetical protein SCO7541 8363910 - 8361751 - | hypothetical protein TERM 2583 8361855 - 8361816 - G 79 -12 -4.07568 | gap 1 TCTTGTCCCTGAAAA CGATCGATCGGCCCCGGGA GTG CCCCGGCGCCGA-CGCGCG GGGACCGACGAGGAC SCO7542 8365387 - 8364041 - | secreted protein SCO7543 8365616 - 8366890 + | CRP family transcriptional regulator TERM 2584 8367015 - 8366971 - f 71 -16.2 -2.62515 | overlap 8366998 AAGCGGGCGACAGCA CGGCGGGGGGCGCCGTGGCG GCAGA CACCTCGGCGGGCGCCGCCG AGTCCGCGCCGGAGC SCO7544 8366985 - 8367788 + | ABC-transport protein, membrane component SCO7545 8367785 - 8368597 + | ABC transporter ATP-binding protein TERM 2585 8369361 - 8369325 - g 76 -15.1 -3.41745 | opp_overlap 8369328, overlap 8369328 GCCGGAGAAGACCAA GAAGGTCCTCGCCGTGC TGC GCGAGGCGATGACCTTC CGTTCGGAGCACACC TERM 2586 8369358 - 8369328 - g 73 -11 -3.84271 | opp_overlap 8369328, overlap 8369325 GGAGAAGACCAAGAA GGTCCTCGCCGTGC TGC GCGAGGCGATGACC TTCCGTTCGGAGCAC SCO7546 8368594 - 8369616 + | lipoprotein SCO7547 8369613 - 8371214 + | sulfatase SCO7548 8371292 - 8372236 + | hypothetical protein SCO7549 8372555 - 8372211 - | hypothetical protein SCO7550 8373534 - 8372680 - | secreted hydrolase SCO7551 8373907 - 8373704 - | secreted protein SCO7552 8374599 - 8373973 - | TetR family transcriptional regulator SCO7553 8374699 - 8375652 + | oxidoreductase SCO7554 8376949 - 8375936 - | LacI family transcriptional regulator TERM 2587 8376886 - 8376918 + g 75 -7.6 -4.3534 | gap 1, overlap 8376887 CGACCCGGGAGACCG TGGT-GCGGCCCACG CCGG CGCGGGCGGCGACCG TTTTGATCGTTGGAC TERM 2588 8377138 - 8377180 + H 81 -17.8 -3.02263 | opp_overlap 8377163 CGAGTCTTCGAGGCG CCGGTGGGAACGTGCCCA CCAAAAT TGGGCACGTTCCCACCCC TGTTCGAGCCGCTGT SCO7555 8377286 - 8378596 + | solute binding lipoprotein SCO7556 8378701 - 8379696 + | sugar transport permease TERM 2589 8379816 - 8379769 - g 77 -15.5 -3.53091 | gap 2, opp_overlap 8379799, overlap 8379770 ACCTCCGCCGCGAAA CCGGCCGGCCGCGGTGGCCGCCG GCTG CTGCG-CCAGCGCG-CCGGCCGC CAGCACCACGCCGGC TERM 2590 8379815 - 8379770 - g 77 -19 -2.71712 | gap 2, opp_overlap 8379799, overlap 8379769 CCTCCGCCGCGAAAC CGGCCGGCCGCGGTGGCCGCCG GCTG CTGCG-CCAGCGCG-CCGGCCG CCAGCACCACGCCGG SCO7557 8379709 - 8380632 + | sugar transport integral membrane protein SCO7558 8380679 - 8382118 + | beta-glucosidase TERM 2591 8382124 - 8382167 + T 75 -15.9 -3.01924 | CGGCGCCTGACCGGG CCGGTGCGGTACCCGACAG CTCGCC CCGCCGGGTGCCGCACCCG TGTTCCGCCCCCGTC SCO7559 8383428 - 8382232 - | secreted sugar hydrolase SCO7560 8384098 - 8383565 - | MutT-family protein SCO7561 8385164 - 8384103 - | esterase SCO7562 8385997 - 8385161 - | transcriptional regulator TERM 2592 8385419 - 8385462 + g 77 -17.5 -3.04144 | gap 3 GTAGCCGCACACTGC CGCCCGCGCGAGCACCGCCCGC AGC GCGGCCGG-G-TCG-GCGGGCG TGTTCGGCGTGCGCG TERM 2593 8386240 - 8386204 - g 78 -17.4 -3.05816 | gap 1 GGACCGGGCAGGCAA CGTCCTTCGGGTCTCCC AGAC GGGCGACCCGAAG-ACG CTGGACCCGCAGAAG TERM 2594 8387050 - 8387017 - g 71 -15.3 -3.14132 | gap 1, opp_overlap 8387036 CCCGCTCCTCATCAA GGCCGTGCTCGGCGGC AAG GCCACCGAG-ACGCCC GCACTCGTCCCGCGC SCO7563 8386079 - 8387629 + | ABC transporter solute binding lipoprotein SCO7564 8387626 - 8388618 + | oligopeptide ABC transporter integral membrane protein TERM 2595 8388674 - 8388662 - g 71 -10.5 -3.7941 | overlap 8388659 GACCCCGGACAAGAA GCCGC CCG GCGGC TCCGGATCCGTCGTC SCO7565 8388624 - 8389529 + | oligopeptide ABC transporter integral membrane protein TERM 2596 8389597 - 8389548 - g 76 -15.6 -3.37056 | gap 2, overlap 8389537 8389535 ACGACCGACCGACAA CCGGCCCCGGCCGGCCCACGGGGC ACGC GCCCCGGCGGCCCGCCGA--CCGG CAACCGCTCCTCGAG SCO7566 8389526 - 8390392 + | oligopeptide ABC transporter ATP-binding protein SCO7567 8390389 - 8391339 + | oligopeptide ABC transporter ATP-binding protein SCO7568 8392310 - 8391351 - | regulatory protein SCO7569 8392352 - 8393143 + | hypothetical protein SCO7570 8393167 - 8394294 + | isomerase SCO7571 8394291 - 8394704 + | hypothetical protein SCO7572 8394796 - 8397792 + | oxidoreductase SCO7573 8398133 - 8397789 - | anti-sigma factor antagonist SCO7574 8398334 - 8398483 + | hypothetical protein SCO7575 8399423 - 8398566 - | secreted hydrolase SCO7576 8400717 - 8399524 - | secreted hydrolase SCO7577 8400971 - 8402080 + | secreted hydrolase SCO7578 8402741 - 8402124 - | hypothetical protein TERM 2597 8403168 - 8403142 - g 72 -12.2 -3.65046 | overlap 8403143 GCGGGAGGCGAACAA GCGCGGTTGGTG GCA CACCTACCGCGA CGTCATGCCGGACTG SCO7579 8402873 - 8403748 + | DNA-binding protein SCO7580 8403793 - 8404608 + | hypothetical protein SCO7581 8406342 - 8404672 - | hypothetical protein SCO7582 8407580 - 8406363 - | hypothetical protein SCO7583 8407690 - 8409591 + | secreted hydrolase SCO7584 8410198 - 8409626 - | transcriptional regulator SCO7585 8410657 - 8410259 - | merR family transcriptional regulator SCO7586 8410741 - 8411814 + | oxidoreductase TERM 2598 8411984 - 8412016 + G 83 -20.5 -2.79183 | overlap 8411972 GTTCGCCGCGTGGCG CCGGCCGCGGGCCGT GCT GTGGACCGCGGCCGG TGTGGTGACCCTCGG SCO7587 8411919 - 8413286 + | integral membrane protein SCO7588 8414277 - 8413357 - | oxidoreductase SCO7589 8415273 - 8414425 - | hypothetical protein SCO7590 8416959 - 8415439 - | catalase SCO7591 8418396 - 8417434 - | regulatory protein TERM 2599 8417661 - 8417626 - G 71 -8.2 -4.08767 | gap 1 GGGACTGGGGGAAAA GTCGGCCTCGT-CCCGC GCG GCGGGCACCAGCGCGAC GACGTCGGTGCGGGC TERM 2600 8418704 - 8418721 + G 70 -12.7 -3.37796 | overlap 8418673 GTCGACCGGGCCTTC GACGGCG CCGA CGCCGTC TTCTGGCTCGTCCCG SCO7592 8418509 - 8419402 + | hypothetical protein SCO7593 8419486 - 8419851 + | hypothetical protein SCO7594 8420016 - 8421062 + | oxidoreductase anmK 8422261 - 8421086 - | anhydro-N-acetylmuramic acid kinase SCO7596 8423870 - 8422299 - | integral membrane transport protein SCO7597 8424877 - 8423879 - | hypothetical protein SCO7598 8424898 - 8425014 + | hypothetical protein SCO7599 8425073 - 8426008 + | transcriptional regulator SCO7600 8427230 - 8426016 - | alanyl tRNA synthetase SCO7601 8428998 - 8427526 - | amidase SCO7602 8429126 - 8429713 + | TetR family transcriptional regulator SCO7603 8430771 - 8429821 - | LysR family transcriptional regulator SCO7604 8430895 - 8431779 + | hypothetical protein SCO7605 8433208 - 8431787 - | metallopeptidase TERM 2601 8432918 - 8432863 - G 70 -16 -2.64243 | gap 1 GCAGACCCGACACGA CGACGGGCGAGGGCACGCCGGGCGCAC CGG GTGTGCCGGGTGTGCCG-CACCCGTCC TCGCCGTTGCCCCAC SCO7606 8433408 - 8434529 + | amino acid binding protein SCO7607 8435734 - 8434553 - | hydrolase SCO7608 8435801 - 8436253 + | hypothetical protein SCO7609 8436974 - 8436288 - | esterase TERM 2602 8437044 - 8437092 + H 79 -16.5 -3.30124 | CACTGCCGGTTTGCT CCGCCGGTCGCCGGTCGCCGGTC GCC GGTCGCCGGCCGTCGGTCGCCGG TTGTCGGCCGTCGGC SCO7610 8437174 - 8438154 + | transcriptional regulator SCO7611 8438157 - 8438870 + | hypothetical protein SCO7612 8439524 - 8438874 - | hypothetical protein SCO7613 8442160 - 8439704 - | integral membrane protein SCO7614 8442765 - 8442244 - | regulatory protein SCO7615 8442864 - 8443736 + | DNA-binding protein TERM 2603 8443825 - 8443791 - g 74 -14.2 -3.53811 | GCGACCTCGGCGAAA GCGGCTGGGAGCGCCC GTG GAGCGGTCCCAACGGC GGCCAGTGCGTGGAG SCO7616 8443733 - 8444002 + | AbaA-like protein SCO7617 8443999 - 8444814 + | hypothetical protein SCO7618 8444820 - 8445614 + | transcriptional regulator SCO7619 8445701 - 8446105 + | anti sigma factor antagonist SCO7620 8446200 - 8446559 + | hypothetical protein SCO7621 8446701 - 8447144 + | hypothetical protein SCO7622 8448644 - 8447193 - | NAD(P) transhydrogenase beta subunit pntA 8450224 - 8448650 - | NAD(P) transhydrogenase subunit alpha SCO7624 8451026 - 8450331 - | TetR family transcriptional regulator SCO7625 8451080 - 8452201 + | monooxygenase SCO7626 8453704 - 8452226 - | monooxygenase SCO7627 8453968 - 8454549 + | hypothetical protein SCO7628 8454701 - 8455840 + | hypothetical protein SCO7629 8455893 - 8457134 + | starvation sensing protein SCO7630 8457210 - 8457884 + | isomerase SCO7631 8459757 - 8457868 - | secreted protein TERM 2604 8460666 - 8460711 + G 77 -12.5 -3.72324 | gap 1, opp_overlap 8460669, overlap 8460669 CTCCTTCAGTGGCCA GAAGTTCGACGCCCTGGCCGCC CAC GCCAGCCAGGGCGA-GAACATC TTCTTCCTCGGGATG TERM 2605 8460708 - 8460669 - g 73 -15 -3.30124 | gap 1, opp_overlap 8460666 8460669 CTTCAGTGGCCAGAA GTTCGACGCCCTGGCCGCC CAC GCCAGCCAGGGCGA-GAAC ATCTTCTTCCTCGGG SCO7632 8460001 - 8460834 + | hypothetical protein SCO7633 8461840 - 8460911 - | secreted endo-beta-N-acetylglucosaminidase SCO7634 8461956 - 8463857 + | hypothetical protein SCO7635 8464428 - 8463880 - | secreted extracellular small neutral protease SCO7636 8464588 - 8464878 + | hypothetical protein SCO7637 8466399 - 8464939 - | secreted endoglucanase TERM 2606 8466592 - 8466628 + r 70 -12.8 -3.28684 | GCGCGGGGCGACCGG CGCGCGCGGCCGGTGG GGCCG CCGACGACCACGCGCG TTGCTGTCACTGCTT SCO7638 8468158 - 8466854 - | enolase TERM 2607 8467231 - 8467193 - G 70 -14.6 -3.28712 | gap 1, opp_overlap 8467188 CTCGTCGGTGCAGAA CACGTCGTCG-CCGGTG AGCTGG CACCGGTCGCCGACGCG GTCGGTCAGTTCGCG TERM 2608 8468256 - 8468276 + H 90 -11.9 -4.34402 | opp_overlap 8468242 8468241, overlap 8468247 TGCTGAGCAGTTGTG CTGCTCAGT TGC GCTGAGCAG TTTTGCTGTGCAGGC SCO7639 8468385 - 8468807 + | MarR family regulatory protein SCO7640 8469810 - 8468827 - | LysR family transcriptional regulator SCO7641 8469909 - 8471105 + | dehydrogenase SCO7642 8471165 - 8471530 + | hypothetical protein SCO7643 8471548 - 8471823 + | hypothetical protein SCO7644 8473099 - 8471876 - | ATP binding protein SCO7645 8473207 - 8473920 + | TetR family transcriptional regulator SCO7646 8474054 - 8474326 + | hypothetical protein SCO7647 8474635 - 8475174 + | calcium binding protein SCO7648 8475881 - 8475216 - | two-component system response regulator SCO7649 8477246 - 8476050 - | two-component system sensor kinase TERM 2609 8476260 - 8476311 + g 74 -16.5 -3.10409 | gap 2, overlap 8476262 8476289 8476296 GCCGATGTCGAGCGT GC-CGCCCGCGGTGCCGTCGAG-GG TGAC CCGCACGACCGCGCCGGGGGCGTGC TTGGCTGCGTTGGTC TERM 2610 8476262 - 8476308 + g 74 -17.9 -2.76189 | gap 1, overlap 8476260 8476289 8476296 CGATGTCGAGCGTGC CGCCCGCGGTGCCGTCGAG-GG TGAC CCGCACGACCGCGCCGGGGGCG TGCTTGGCTGCGTTG SCO7650 8477428 - 8478900 + | secreted hydrolase SCO7651 8479516 - 8478902 - | TetR family transcriptional regulator SCO7652 8479547 - 8480098 + | acetyltransferase SCO7653 8480911 - 8480189 - | hypothetical protein SCO7654 8481163 - 8482020 + | oxidoreductase TERM 2611 8483027 - 8482977 - g 82 -18.4 -3.15544 | gap 1 CCCGAGTGGTACGAA CTGT-TCCGCGCCGCCGGCTACA CGGTGC CGTAACCGACGGCGCGGCCACAG GGGACGAGACGCGGA SCO7655 8482077 - 8483009 + | oxidoreductase SCO7656 8483077 - 8483598 + | hypothetical protein SCO7657 8483781 - 8485538 + | secreted protein SCO7658 8485558 - 8485710 + | hypothetical protein SCO7659 8486792 - 8485671 - | oxidoreductase SCO7660 8487119 - 8487601 + | voltage-gated potassium channel SCO7661 8487642 - 8488280 + | secreted protein SCO7662 8488518 - 8489696 + | chloramphenicol resistance protein SCO7663 8490212 - 8489928 - | hypothetical protein SCO7664 8490745 - 8490209 - | hypothetical protein SCO7665 8490963 - 8490754 - | hypothetical protein SCO7666 8491153 - 8492100 + | zinc-binding oxidoreductase (fragment) SCO7667 8492106 - 8492702 + | hypothetical protein SCO7668 8492781 - 8493260 + | hypothetical protein SCO7669 8494580 - 8493549 - | oxidoreductase SCO7670 8495092 - 8494577 - | hypothetical protein SCO7671 8496340 - 8495102 - | transferase TERM 2612 8495180 - 8495135 - G 76 -15.9 -3.4072 | GAGTTCGGAGCAGAA CCCGGGGCCCATCGCCAGGAG CAGG CCCCAGGTGCCGGGCTCCGGG GCACGGCGTGCCCGG SCO7672 8496377 - 8497237 + | integral membrane protein SCO7673 8497424 - 8497978 + | lipoprotein SCO7674 8498017 - 8498415 + | secreted metal-binding protein SCO7675 8498412 - 8498906 + | integral membrane protein SCO7676 8499061 - 8499282 + | ferredoxin TERM 2613 8499545 - 8499514 - g 71 -12.9 -3.53012 | opp_overlap 8499542 CGGCTCCGCCGGAAA CCCCGGACCGGGG TCCTCG CCCCGTTCCGGCG GCACGCTCCGCGCCG TERM 2614 8500357 - 8500340 - g 71 -12.7 -3.54543 | AGGGAGGCGTTCAAA CTCGCGG TCGA CCGCGAG GCCATGGTGAAGACC SCO7677 8499392 - 8500978 + | secreted solute-binding protein SCO7678 8500975 - 8501925 + | metal transport integral membrane protein SCO7679 8501922 - 8502776 + | transport system integral membrane protein SCO7680 8502773 - 8504398 + | ABC transporter ATP-binding protein TERM 2615 8504455 - 8504415 - T 95 -25.6 -2.78384 | CGGCGTCTTACGACA GGCG-GGAGGAGCACCCCGG TCA CCGGGG-GCTCCTCCGCGCC GGGTCTCACGGCCGG SCO7681 8506122 - 8504461 - | AMP-binding ligase TERM 2616 8512392 - 8512365 - g 71 -15.6 -3.06671 | gap 1 ACAGCCAGCTGAAGA TCGCCGGCCACCG CAT CGA-GGCCGGCGA GGTCGAGGCCGCGCT SCO7682 8506283 - 8512972 + | non-ribosomal peptide synthase SCO7683 8512969 - 8518497 + | non-ribosomal peptide synthase TERM 2617 8519619 - 8519579 - g 78 -18.1 -3.17075 | CCTGCGCGAAGGGAA CGTCGCCGACCTCCGGCCC ACC GGAGCGGCGGCCGGCGCCG ACCGGGTGGAAGAGG SCO7684 8518494 - 8519645 + | hypothetical protein SCO7685 8519642 - 8521675 + | hypothetical protein SCO7686 8521684 - 8522919 + | cytochrome P450 SCO7687 8522916 - 8523749 + | thioesterase SCO7688 8523760 - 8524488 + | hypothetical protein TERM 2618 8526279 - 8526245 - g 71 -15.6 -3.08798 | ACGCGTCACCGAACA GGGCCGCCACGACGAC CTC GTCGCCGCGGGGGGCC GTTACGCCGCCCTCT SCO7689 8524521 - 8526347 + | ABC transporter ATP-binding protein SCO7690 8526344 - 8528107 + | ABC transporter ATP-binding protein TERM 2619 8529063 - 8529005 - g 84 -20.9 -2.74523 | gap 1, overlap 8529002 CGAGGTCGAAGACGA CGGGCGGGTCAGCACCCAGCCGCTCGCG GGCA CGCGCGCC-CTGGGCGCCGACCCGGCGG AGAACGAGCGCCGGC SCO7691 8528166 - 8529581 + | lyase SCO7692 8529736 - 8530005 + | hypothetical protein SCO7693 8530953 - 8529982 - | oxidoreductase SCO7694 8531016 - 8531588 + | TetR family transcriptional regulator SCO7695 8532009 - 8531641 - | hypothetical protein SCO7696 8532086 - 8532541 + | MarR family transcriptional regulator SCO7697 8532741 - 8534048 + | secreted hydrolase SCO7698 8535284 - 8534142 - | merR family transcriptional regulator SCO7699 8535532 - 8536947 + | nucleotide-binding protein SCO7700 8537030 - 8538352 + | cyclase SCO7701 8538368 - 8539246 + | methyltransferase SCO7702 8539362 - 8540072 + | GntR family transcriptional regulator SCO7703 8540069 - 8541319 + | integral membrane transport protein SCO7704 8541365 - 8542072 + | TetR family transcriptional regulator SCO7705 8542150 - 8543340 + | oxidoreductase SCO7706 8544237 - 8543383 - | DNA-binding protein SCO7707 8544375 - 8544659 + | hypothetical protein SCO7708 8545343 - 8544693 - | hypothetical protein SCO7709 8545444 - 8545872 + | MarR family transcriptional regulator SCO7710 8545981 - 8546727 + | phosphotransferase SCO7711 8546786 - 8548315 + | two component system sensor kinase SCO7712 8548323 - 8549003 + | two component system response regulator SCO7713 8549088 - 8549492 + | hypothetical protein SCO7714 8549883 - 8550365 + | acetyltransferase SCO7715 8550431 - 8551234 + | hypothetical protein SCO7716 8551498 - 8551953 + | hypothetical protein SCO7717 8552420 - 8552007 - | secreted protein TERM 2620 8552331 - 8552301 - G 100 -25.4 -2.87132 | GGTCTCGGTGACACA GCCGGGCGCCGCCG ACG CGGTGGCGCCCGGC GCGGTGACCGCCGAG SCO7718 8553297 - 8552524 - | hypothetical protein SCO7719 8554087 - 8553428 - | TetR family transcriptional regulator TERM 2621 8553992 - 8554046 + g 93 -19.2 -3.65046 | gap 1 CACCTGGTCCGGTCC GCGCTCCACG-GCCAGGCGCAGCGC CGCTTC GCGCAGCGCCTCGCGCGTGGCCCGC TTCTTCCGCTCCCGC TERM 2622 8554112 - 8554170 + H 72 -16.1 -2.82803 | gap 1, opp_overlap 8554125 8554126 8554141 8554143 8554158, overlap 8554124 8554126 TTTCCACGCGCGACT -GCGTGCCCGCAAACTTGCGCGTACGTA AATA TGCGTAAGCGCAAACTTGCGTGCACGCA CTTTCCCTGTCACTC TERM 2623 8554410 - 8554362 - g 83 -21 -2.62263 | opp_overlap 8554373 ACGCGGTCCAGATCA TCGGCGGCGAC-CCGGACCGCCTG GAG CTGGCCG-CCGGCGCCGCCGCCGA GCTCGGCCTGGAGGT SCO7720 8554142 - 8555248 + | hypothetical protein SCO7721 8555357 - 8556118 + | hypothetical protein SCO7722 8556355 - 8556939 + | hypothetical protein SCO7723 8558303 - 8557122 - | hypothetical protein SCO7724 8559848 - 8558433 - | hypothetical protein SCO7725 8559885 - 8560667 + | hypothetical protein TERM 2624 8560731 - 8560687 - f 100 -20.1 -4.13767 | overlap 8560688 GCGGCCACGGGAAAA GCTGGGGCCGTCCTCCCG-CC ACGGG GGTCGGGAGGACGGCCCC-GT ATCGGTCGGCCGCCG TERM 2625 8560730 - 8560688 - f 100 -23.6 -3.08046 | overlap 8560687 CGGCCACGGGAAAAG CTGGGGCCGTCCTCCCG-CC ACGGG GGTCGGGAGGACGGCCCC-G TATCGGTCGGCCGCC SCO7726 8561544 - 8562200 + | hydrolase TERM 2626 8562204 - 8562240 + T 100 -32.4 -3.33696 | opp_overlap 8562204 AGCGAGGCCTGACAA CTCCGCGGGGGCGGCC GAGCG GGCCGCCCCCGCGGAG TTCGTTCGGCAGGGC TERM 2627 8562240 - 8562204 - T 100 -32.4 -3.30243 | opp_overlap 8562204 AGCGAGGCCTGACAA CTCCGCGGGGGCGGCC GAGCG GGCCGCCCCCGCGGAG TTCGTTCGGCAGGGC SCO7727 8563058 - 8562591 - | MarR family regulatory protein SCO7728 8563210 - 8563518 + | hypothetical protein SCO7729 8563625 - 8564623 + | hypothetical protein SCO7730 8564658 - 8564996 + | hypothetical protein SCO7731 8565486 - 8566037 + | hypothetical protein SCO7732 8566732 - 8567118 + | hypothetical protein SCO7733 8567132 - 8569351 + | transcriptional regulatory protein SCO7734 8569361 - 8569918 + | hypothetical protein SCO7735 8569962 - 8570174 + | hypothetical protein SCO7736 8572470 - 8570209 - | integral membrane protein TERM 2628 8571110 - 8571078 - G 76 -6.2 -4.37092 | opp_overlap 8571109, overlap 8571096 ACGGGGTGTAGAAAA TCCCGAACATGCAC AGCAG GAGCAGGCTCAGGA GGGCGGGGCCGTCTC SCO7737 8573140 - 8573652 + | hypothetical protein TERM 2629 8573853 - 8573905 + T 85 -17.6 -3.54436 | overlap 8573855 CGCTCTCTGGGATGG CTGGCCGGTCCGGCGCGGTCCGGT CTCCC GTTGCACCGCATCGGACCGGCCTG TTCTGTGGCTGTGTC TERM 2630 8573855 - 8573903 + T 91 -18.8 -3.34239 | overlap 8573853 CTCTCTGGGATGGCT GGCCGGTCCGGCGCGGTCCGGT CTCCC GTTGCACCGCATCGGACCGGCC TGTTCTGTGGCTGTG SCO7738 8574302 - 8573919 - | hypothetical protein SCO7739 8575071 - 8574364 - | hydrolase SCO7740 8575674 - 8575438 - | hypothetical protein SCO7741 8577372 - 8576308 - | bifunctional protein SCO7742 8577403 - 8577879 + | MarR family transcriptional regulator SCO7743 8578485 - 8578000 - | hypothetical protein SCO7746 8579414 - 8579043 - | insertion element transposase TERM 2631 8579801 - 8579848 + H 71 -15.3 -3.07307 | opp_overlap 8579793, overlap 8579836 8579837 GCGAACACCCGGTCC GAGCGGCGGGGCCGAGCGGAG ACCGTG CCCGGCACGGCCCGGCCGCAC TTGGCTGAGCGTTTC SCO7747 8580056 - 8581234 + | hypothetical protein SCO7748 8581406 - 8583109 + | hypothetical protein SCO7749 8583106 - 8584200 + | hypothetical protein SCO7750 8584197 - 8584610 + | hypothetical protein SCO7751 8584661 - 8585167 + | regulatory protein SCO7752 8586017 - 8585463 - | integral membrane protein SCO7753 8586500 - 8586108 - | hypothetical protein TERM 2632 8586231 - 8586264 + g 71 -7.3 -4.11692 | gap 1, opp_overlap 8586221 GAGCAGCGCGGCGAC GGTCAGGC-CCGCCTC GGC GGGGTGGCGCAGGACC TTTTCGGGCTCGATG SCO7754 8586592 - 8586975 + | anti-sigma factor antagonist SCO7755 8587133 - 8587375 + | hypothetical protein SCO7756 8587396 - 8587620 + | hypothetical protein TERM 2633 8588392 - 8588433 + F 73 -14.3 -3.29947 | CGCCGGTAGGCCGCC CGGTCGAGTCGGCAGAGGC TCTC GCCCCTGCGGATGCGGCCG TTGATCTGGTCGATG TERM 2634 8588697 - 8588739 + F 95 -13.2 -4.59773 | overlap 8588699 CTTTGTGGTCAGCCC GCCGCGGGACCGGCCGAGTG CCT CGCCCGGCCAGTCCTGCCCC TTTTTCGGGCTCCCG SCO7759 8589189 - 8590784 + | DNA-binding protein SCO7760 8591087 - 8590974 - | oxidoreductase fragment SCO7761 8591283 - 8591942 + | hypothetical protein TERM 2635 8592055 - 8592027 - f 70 -13.8 -3.22884 | gap 1, opp_overlap 8592036 GGATCAACTCACCAA CCCGTCCGCCGCC ACTC GGCGGCGC-CGGG AAGCGTTTGAGTACG SCO7762 8592094 - 8593056 + | hypothetical protein SCO7763 8593351 - 8594052 + | hypothetical protein SCO7764 8594110 - 8594421 + | hypothetical protein SCO7765 8595004 - 8595444 + | transcriptional regulator TERM 2636 8595509 - 8595473 - f 73 -15.3 -3.15544 | opp_overlap 8595473 TCGCACCTTGACGAA GTTCATGCCGTGAACTA GTT TCGTTCATGGCATGAAC TAGTGAAGGGTGGAA SCO7766 8595528 - 8596418 + | hypothetical protein SCO7767 8597410 - 8596583 - | DNA-binding protein TERM 2637 8597435 - 8597471 + H 74 -17.3 -2.52464 | opp_overlap 8597431 CTGTCACAGGAGGGA CGGCTGAGCCTCGCACT GCT GGTCCGGGGCTTAGCCG TCCGTTCCGCGCCCG SCO7768 8597540 - 8597980 + | hypothetical protein SCO7769 8597980 - 8598822 + | hypothetical protein SCO7770 8598830 - 8599405 + | hypothetical protein SCO7772 8600881 - 8600297 - | hypothetical protein SCO7773 8601808 - 8601284 - | hypothetical protein SCO7774 8602543 - 8603184 + | secreted protein SCO7775 8603181 - 8603747 + | secreted protein TERM 2638 8603793 - 8603836 + F 77 -15.2 -3.53012 | ACCGTCTCCGCGCGG CCGCCGTCGGCGTACGGG CCCCCGCT CCCGTACGCCGCCAACGG TTTGAACCGCCCCGA TERM 2639 8604154 - 8604108 - f 100 -38.2 -3.17075 | CCTGGGGGAACGGAA GGCTCAGCCCCGGTCACCGCCG AGA CGGCGGTGACCGGGGCTGAGCG CGCTCCGCGAGTGGA SCO7776 8604333 - 8604653 + | hypothetical protein SCO7777 8605640 - 8604711 - | hydrolase SCO7778 8605797 - 8606564 + | transcriptional regulator SCO7779 8607405 - 8606671 - | oxidoreductase SCO7780 8607539 - 8608480 + | transcriptional regulator SCO7782 8609130 - 8610347 + | IS110 transposase SCO7784 8610851 - 8611627 + | oxidoreductase SCO7785 8611643 - 8612263 + | transcriptional regulator SCO7786 8613085 - 8612498 - | hypothetical protein TERM 2640 8613450 - 8613417 - R 81 -18.2 -3.06302 | opp_overlap 8613425 ACCAGTTTCAGTGAA CGCGCCGATCGGGA TCCGGT TCTCGATCGGCGCG TCGTGGACTGCAGGC SCO7787 8613841 - 8613473 - | hypothetical protein SCO7788 8614045 - 8613848 - | hypothetical protein SCO7789 8614369 - 8614151 - | hypothetical protein SCO7790 8614620 - 8614384 - | secreted oxidoreductase SCO7791 8616050 - 8614845 - | secreted oxidoreductase SCO7791a 8617276 - 8616047 - | secreted oxidoreductase SCO7792 8617886 - 8617566 - | hypothetical protein SCO7793 8618245 - 8617943 - | hypothetical protein SCO7794 8618313 - 8618951 + | TetR family transcriptional regulator SCO7795 8618974 - 8619171 + | transposase TERM 2641 8619207 - 8619225 + F 72 -5.2 -4.33708 | overlap 8619209 TCGCCCAGGGTTTTG GCGTAGTC GGC GACTGCCC TTTTCGTGATCATTT SCO7796 8619410 - 8620069 + | hypothetical protein SCO7797 8620088 - 8620228 + | putative transposase SCO7798 8620857 - 8620339 - | transposase SCO7799 8621255 - 8620776 - | transposase TERM 2642 8621431 - 8621419 - g 90 -9.1 -4.84274 | GAACGAGATCAAAAA GCTGG AGT CCAGC CCACGGGGGTCGACA SCO7800 8621285 - 8621500 + | hypothetical protein SCO7801 8621520 - 8621900 + | hypothetical protein TERM 2643 8622916 - 8622934 + F 72 -11.6 -3.59979 | CGAGTCCTCCGTGCA CGGCAGCG TGG CGCAGCCG TTTCCGCTGAAGGCC SCO7803 8623230 - 8624186 + | insertion element transposase SCO7804 8625198 - 8625431 + | hypothetical protein SCO7805 8625511 - 8625846 + | hypothetical protein SCO7806 8627069 - 8626338 - | DNA-binding protein SCO7807 8627355 - 8627077 - | hypothetical protein SCO7808 8627651 - 8627358 - | hypothetical protein SCO7809 8628988 - 8628356 - | TetR family transcriptional regulator SCO7810 8629040 - 8629804 + | oxidoreductase SCO7811 8630430 - 8630050 - | membrane protein SCO7812 8631386 - 8630427 - | insertion element transposase SCO7813 8631557 - 8632408 + | hypothetical protein SCO7815 8634816 - 8635487 + | TetR family transcriptional regulator SCO7816 8635620 - 8636324 + | membrane protein SCO7817 8637242 - 8636400 - | DNA-binding protein SCO7818 8637359 - 8638123 + | oxidoreductase SCO7819 8639436 - 8638588 - | integral membrane protein SCO7820 8639456 - 8639902 + | hypothetical protein SCO7821 8640037 - 8640450 + | integral membrane protein SCO7822 8642638 - 8641685 - | prolipoprotein diacylglyceryl transferase SCO7823 8643124 - 8642714 - | membrane protein SCO7824 8643812 - 8643240 - | TetR family transcriptional regulator SCO7825 8643812 - 8644108 + | hypothetical protein SCO7826 8645791 - 8644811 - | hypothetical protein SCO7827 8647537 - 8645888 - | transposase TERM 2644 8645947 - 8645995 + g 73 -11 -3.95219 | opp_overlap 8645967 GGTGGGCGATCAGGA CGACGCGGTGG-CGGAGGAGACGG ACG CCGGCTCGTCCGGCCAT-GAGTCG TTTCTGCAGTTTGAC TERM 2645 8646110 - 8646128 + g 86 -8.8 -4.62069 | TCCGGCAAAGCCGAC GAGTGGTC CCA GTCCACTC TTTTTGAGATCGCCC TERM 2646 8647655 - 8647603 - H 70 -4.1 -4.45083 | overlap 8647619 GCCAGAGCCAGAAAA GTCCGTACGC-CGACAAGCGGCC CGACGCGGC GGCCGCATGATGCGCG-ACGAAC GCCGGCAGCGGCGGT SCO7828 8647737 - 8647991 + | putative DNA-binding protein SCO7829 8648157 - 8649023 + | hypothetical protein SCO7830 8649589 - 8649245 - | hypothetical protein SCO7831 8649793 - 8649590 - | hypothetical protein TERM 2647 8649840 - 8649862 + H 90 -12.6 -4.18018 | overlap 8649841 8649849 GGCGGACGTCAGCGC TCGGGCAGCC TGC GGCGGCCCGG TTTTCGCTCGCGGGC TERM 2648 8650481 - 8650536 + G 71 -15.3 -3.15574 | opp_overlap 8650453, overlap 8650480 8650483 GCTGCGCGACCCACG CC-GCGCGGCCCTGCCGATCGCCGCCG CGCT CGGCGGCG-TCGCCGTGCCCGCCCTGG TCTTCCTGGCCTTCA TERM 2649 8650483 - 8650533 + G 70 -16.7 -2.77701 | gap 1, opp_overlap 8650453, overlap 8650481 8650480 TGCGCGACCCACGCC GCGCGGCCCTGCCGATCGCCGCCG CGCT CGGCGGCG-TCGCCGTGCCCGCCC TGGTCTTCCTGGCCT SCO7832 8650206 - 8651438 + | Na+/H+ antiporter TERM 2650 8651755 - 8651711 - f 91 -20 -3.31144 | opp_overlap 8651697 8651712, overlap 8651712 GCCGGAGCCTCAGAA CCTGAGCGCGCTGGTTGGTG TTCGT CGCCGACCAGCGCGCTCAGT TTTTCGTCCGCAGAC TERM 2651 8651754 - 8651712 - f 93 -23.5 -2.58544 | opp_overlap 8651697 8651712, overlap 8651711 CCGGAGCCTCAGAAC CTGAGCGCGCTGGTTGGTG TTCGT CGCCGACCAGCGCGCTCAG TTTTTCGTCCGCAGA TERM 2652 8651712 - 8651754 + F 100 -27.9 -4.72272 | opp_overlap 8651711 8651712, overlap 8651697 CCGGAGCCTCAGAAC CTGAGCGCGCTGGTTGGTG TTCGT CGCCGACCAGCGCGCTCAG TTTTTCGTCCGCAGA SCO7833 8651913 - 8652191 + | hypothetical protein SCO7834 8652479 - 8652769 + | hypothetical protein SCO7835 8653054 - 8653464 + | hypothetical protein SCO7837 8655142 - 8654051 - | membrane protein SCO7836 8653485 - 8654294 + | hypothetical protein SCO7838 8655556 - 8655891 + | hypothetical protein SCO7839 8656148 - 8656498 + | hypothetical protein SCO7840 8656508 - 8656954 + | hypothetical protein SCO7841 8658204 - 8657098 - | ATP/GTP-binding protein SCO7842 8660321 - 8658201 - | transposase TERM 2653 8658440 - 8658451 + g 71 -3.6 -4.48072 | overlap 8658416 CGGAGCGGGTGGCTC TCCG ACGG CGGG TTTTCTGCTCGGTCT SCO7843 8661282 - 8660335 - | hypothetical protein SCO7844 8663639 - 8661288 - | DNA-binding protein SCO7845 8666256 - 8663695 - | hypothetical protein TERM 2654 8664480 - 8664501 + g 70 -13.7 -3.21099 | gap 1 GGTGGGGGTCGAGTT CGCCTGCGCG GTG CGCGC-GGCG TTGCTGGTGGACCCA TERM 2655 8665650 - 8665638 - G 85 -3.3 -4.87626 | GCCCAAGATCAAAAA TCCGG GTG CCGTA GGTGCTGGAGTCGTC SCO7846 8667062 - 8666385 - | hypothetical protein SEQUENCE gi|21233999|ref|NC_003903.1| Streptomyces coelicolor A3(2) plasmid SCP1, complete sequence (length 356023) SCP1.01c 1522 - 899 - | hypothetical protein TERM 1 1560 - 1597 + r 93 -22.7 -3.16564 | overlap 1563 CTCGTGTGGGGCGAA GTGCCGGCGGGCACGGT CAGT GCCGTGCCCGCCGGTCC TTGCTCGGGTCAGGC TERM 2 1563 - 1594 + r 95 -25.2 -2.78547 | overlap 1560 GTGTGGGGCGAAGTG CCGGCGGGCACGGT CAGT GCCGTGCCCGCCGG TCCTTGCTCGGGTCA SCP1.02c 2812 - 1607 - | hypothetical protein SCP1.03c 3121 - 2903 - | hypothetical protein SCP1.04c 3345 - 3109 - | hypothetical protein SCP1.05c 3819 - 3424 - | hypothetical protein SCP1.06c 4632 - 4408 - | hypothetical protein SCP1.07c 4922 - 4629 - | hypothetical protein SCP1.08c 5440 - 4919 - | hypothetical protein SCP1.09c 6181 - 5516 - | hypothetical protein TERM 3 6610 - 6596 - H 74 -10 -4.06055 | ACCCGGGAAAGGAAA GAGCAG TTG CTGCTC CCGGCGGCCGGTACA SCP1.10 6777 - 7271 + | hypothetical protein SCP1.11c 8138 - 7395 - | hypothetical protein TERM 4 7864 - 7852 - G 86 -4.8 -4.91109 | TGGCGATTACAAAAA CCCA GACCG TGGG TGGGGCTCCATAGGT SCP1.12c 8590 - 8135 - | hypothetical protein SCP1.13c 10249 - 8633 - | hypothetical protein SCP1.14c 11430 - 10282 - | hypothetical protein TERM 5 11479 - 11493 + H 80 -11.4 -4.07568 | GTAGCGGCGCCCGCA CCGGTC GCG GACCGG TTTTAGAGGCCCCCC SCP1.15 11690 - 11914 + | hypothetical protein SCP1.16c 12946 - 12362 - | hypothetical protein SCP1.17 13089 - 13907 + | hypothetical protein SCP1.18c 16294 - 13943 - | putative DNA integrase/recombinase SCP1.19c 17612 - 16386 - | putative DNA integrase/recombinase SCP1.20c 18400 - 17618 - | hypothetical protein TERM 6 18193 - 18238 + g 71 -4.5 -4.25104 | gap 1 CCTGGGCGGTGGGGC GTTGACGCGCGTGCTCGTCGAC GCG GTCG-CGGGCCTGGGTGGCGGC TTTTGCTGCCCGGGC SCP1.21c 19278 - 18421 - | hypothetical protein SCP1.22c 19586 - 19353 - | hypothetical protein SCP1.23c 19708 - 19574 - | hypothetical protein SCP1.24 19920 - 20165 + | hypothetical protein TERM 7 20225 - 20190 - T 100 -28.4 -3.18264 | GGCGGTAGCGATGAA GGGCCCGGGCCACCAG AGTT CTGGTGACCCGGGCCC CGAAGCGATCAGCCT SCP1.25c 21338 - 20274 - | hypothetical protein SCP1.26c 22904 - 22062 - | hypothetical protein SCP1.27c 26470 - 23099 - | hypothetical protein SCP1.28c 26876 - 26523 - | hypothetical protein SCP1.29 27692 - 28150 + | hypothetical protein SCP1.30 28891 - 28328 - | hypothetical protein SCP1.31 29125 - 29784 + | putative secreted protein SCP1.32c 30219 - 29839 - | hypothetical protein SCP1.33c 31271 - 30246 - | hypothetical protein SCP1.34 31461 - 32399 + | putative integral membrane protein SCP1.35 32556 - 32855 + | hypothetical protein SCP1.36c 34080 - 33166 - | AraC family transcriptional regulator SCP1.37 34167 - 35162 + | putative short-chain oxidoreductase SCP1.38c 36417 - 35455 - | putative transposase SCP1.39c 36905 - 36486 - | hypothetical protein SCP1.40c 37165 - 36908 - | hypothetical protein SCP1.41c 39204 - 37969 - | hypothetical protein SCP1.42c 40754 - 40107 - | TetR family regulatory protein SCP1.43 40935 - 41750 + | short chain dehydrogenase SCP1.44 42353 - 43369 + | putative oxidoreductase SCP1.45 43464 - 45101 + | putative integral membrane efflux protein TERM 8 45770 - 45786 + F 71 -8.7 -4.13945 | opp_overlap 45784 GACCCCGGGCGCGTA CCGCTTC GTA GAAGTGG TTTTCAAATCCAGGT SCP1.47 49731 - 50141 + | hypothetical protein SCP1.48c 51074 - 50418 - | hypothetical protein SCP1.49c 52008 - 51118 - | hypothetical protein sapD 53301 - 52099 - | spore associated protein, sapd sapE 53842 - 53318 - | spore associated protein, sape SCP1.52c 54702 - 53839 - | putative lysase SCP1.53c 55715 - 54699 - | 4-hydroxy-2-ketovalerate aldolase SCP1.54c 56593 - 55712 - | acetaldehyde dehydrogenase SCP1.55c 57444 - 56620 - | putative hydratase sapC 57893 - 57441 - | spore associated protein, sapc SCP1.57c 58462 - 57923 - | hypothetical protein TERM 9 58072 - 58052 - G 70 -13.9 -3.28712 | GGGCCGGTGCCAGAA CGGGCCGGG CGG CACGGCCCG GTTCAGGGACGGCAG SCP1.58c 58902 - 58459 - | putative regulatory protein SCP1.59c 59396 - 58920 - | hypothetical protein SCP1.60 59650 - 60522 + | putative DNA-binding protein SCP1.61 60519 - 60743 + | putative regulatory protein SCP1.62 61144 - 61557 + | hypothetical protein SCP1.63 61655 - 63463 + | putative atp/GTP-binding protein SCP1.64c 63702 - 63427 - | hypothetical protein SCP1.65 63899 - 66577 + | putative atp/GTP-binding protein SCP1.66c 66956 - 66588 - | hypothetical protein SCP1.67c 67213 - 66959 - | hypothetical protein TERM 10 67052 - 67073 + g 81 -18.7 -3.04144 | CTCGACGCCGAGCTC GCGCGCCGC CTCG GCGGCGCGC TCTTCCCGCTCCGCC SCP1.68 67553 - 68452 + | hypothetical protein SCP1.69c 68872 - 68525 - | hypothetical protein SCP1.70c 69385 - 69221 - | hypothetical protein SCP1.71c 69704 - 69453 - | hypothetical protein TERM 11 69549 - 69602 + g 70 -16.2 -2.57211 | gap 2, overlap 69549 GCTGGTTTCCGGTTC GGTGAGTTCACGGAGCACCGTCACGG CCTG CCGTGACGGTGCTCCG--AACTCGGG CTTCTCGACGAGGAT TERM 12 69549 - 69603 + g 77 -16 -3.28924 | gap 3, overlap 69549 GCTGGTTTCCGGTTC G-GTGAGTTCACGGAGCACCGTCACGG CCTG CCGTGACGGTGCTCCG--AACTCGGGC TTCTCGACGAGGATC SCP1.72c 70379 - 69714 - | hypothetical protein SCP1.73c 72058 - 70445 - | hypothetical protein TERM 13 71152 - 71191 + g 79 -13.6 -3.58343 | gap 1, overlap 71153 GCACCTTGTAGGGGT TGCGGTCGGCTCGTTGTGC GGC GTGCAAC-AGCCGTCCGCG TTTGACGATGGTGGC TERM 14 72854 - 72838 - g 82 -13.7 -3.86202 | CCTCAGCACACGAAA GGAGCGC TAC GCGCTCC TCGCCGAGCGCCGCG SCP1.74 72284 - 73369 + | hypothetical protein TERM 15 73605 - 73564 - T 81 -18 -3.12668 | gap 1 CAGGGTCACAGTGAA GCCAGGGCCCGTGCTGGTG GCGTA CGCC-GCAGGGGCCCTGGC TGAGGGCTGGCCGTC SCP1.75c 74073 - 73777 - | hypothetical protein SCP1.76c 75391 - 74846 - | hypothetical protein SCP1.77c 76277 - 75615 - | hypothetical protein SCP1.78 76340 - 77068 + | hypothetical protein TERM 16 78530 - 78564 + F 100 -30.2 -3.67611 | opp_overlap 78524 78523 GCCGAGAATGTGGGG CATCGCTGCCGCCGAC GAA GTCGGCGGCAGCGATG TTCTGTTCGGGTGCG SCP1.80 78993 - 79994 + | hypothetical protein SCP1.81 79999 - 80421 + | hypothetical protein TERM 17 80637 - 80619 - g 74 -11.6 -3.77206 | overlap 80620 GACAACGGCATCAAA TGGCGGGC CCT GCCCGCCG ACTATCCGCCCTGGC SCP1.82 80439 - 81284 + | putative transposon tn5714 transposase SCP1.85 82970 - 83170 + | hypothetical protein SCP1.85c 84711 - 83371 - | hypothetical protein TERM 18 85403 - 85351 - H 93 -21.2 -3.24747 | opp_overlap 85348 85392, overlap 85373 CGCGGACAGCACGAA CGCCCCGTCGAAGGACCAGCAACC GGCAT GGCTGCTGGCCCCACGGCGGGGTG CGGTGTGTTGGGTGA TERM 19 85511 - 85557 + G 81 -5.2 -4.73388 | gap 3, overlap 85514 ACAAGGTCCGTCGGC CACGTGGCCCC-TC--CCGGCTT GCCA AGGCCGGTCGACGGGGCCACTTC TTTTTGATCAACGTT TERM 20 85514 - 85554 + G 88 -11.3 -4.47707 | gap 3, overlap 85511 AGGTCCGTCGGCCAC GTGGCCCC-TC--CCGGCTT GCCA AGGCCGGTCGACGGGGCCAC TTCTTTTTGATCAAC SCP1.86 85408 - 85683 + | hypothetical protein SCP1.87c 86630 - 85719 - | putative oxidoreductase SCP1.88c 87208 - 86627 - | putative hydrolase SCP1.89c 88383 - 87214 - | hypothetical protein SCP1.90c 89277 - 88591 - | putative atp/GTP-binding protein TERM 21 88899 - 88882 - G 77 -9.1 -4.13767 | TTCCCGAGTCCAAAA GCCGTGG TCGA CCACGAC CTCGTGCCCGGCCGT SCP1.91c 90032 - 89274 - | GntR family transcriptional regulator SCP1.92 90418 - 91026 + | hypothetical protein TERM 22 91093 - 91042 - f 100 -44.7 -3.14132 | CCCGCTCCGGACGAA CAGCCACGGCCCTGGCCGCCCCG TTGATG CGGGGCGGCCAGGGCCGTGGCTG CTCATACAGCGATCC TERM 23 91409 - 91439 + F 86 -18.4 -3.30124 | opp_overlap 91412, overlap 91412 GGCCTTGCACGCGAC GAACCCCCAGGG ATTGGCC CCCTGGGGGTTC TTGTCGCAGGTCACC TERM 24 91412 - 91436 + F 82 -14.3 -3.7941 | opp_overlap 91412, overlap 91409 CTTGCACGCGACGAA CCCCCAGGG ATTGGCC CCCTGGGGG TTCTTGTCGCAGGTC TERM 25 91436 - 91412 - f 73 -15 -3.16564 | opp_overlap 91412 91409 CTTGCACGCGACGAA CCCCCAGGGA TTGGC CCCCTGGGGG TTCTTGTCGCAGGTC SCP1.93 91528 - 91956 + | hypothetical protein TERM 26 92010 - 91975 - f 100 -25.4 -3.00022 | opp_overlap 92002 CGCACCTCATACACA CGGCCCGGGCAGCGCA TCGC CGCGCGGCCCGGGCCG CCGCCCGCATCGGTT SCP1.94 92149 - 92322 + | hypothetical protein TERM 27 92451 - 92424 - f 75 -16.3 -3.12351 | opp_overlap 92424 92426 CCGCCGCACACGCAA CAGCCCCGGGG TGGCCG CCCCGGAGCTG TCTCCTGCACTGGAC SCP1.95 92483 - 92791 + | putative regulatory protein TERM 28 92845 - 92875 + F 100 -25.5 -3.56643 | CGCAGTGCTGCCATC GACCGGCCGCCCG CACGA CGGGCGGCCGGTC TTTCGCACGTCTCCA SCP1.96 92934 - 93173 + | hypothetical protein SCP1.97 93231 - 93647 + | hypothetical protein SCP1.98 93707 - 95878 + | putative large alanine-rich protein TERM 29 95938 - 95896 - f 86 -20.6 -2.87211 | overlap 95899 ACCGTCCGGCACACA CCAGTGAGGGCCAGCCCG CGGGAAT CGGGCTGGCCCTCGCTGC GACTGCCGGAAGCAG TERM 30 95935 - 95899 - f 88 -20.9 -2.69151 | overlap 95896 GTCCGGCACACACCA GTGAGGGCCAGCCCG CGGGAAT CGGGCTGGCCCTCGC TGCGACTGCCGGAAG TERM 31 96145 - 96129 - g 72 -12.3 -3.67792 | GGACATGCAGGCAAA GCTGGAG GTC CTCCAGC ACGAGACCCGCGTGC SCP1.99 96001 - 96492 + | hypothetical protein SCP1.100 96676 - 99111 + | putative atp/GTP-binding gly/ala-rich protein traB 99127 - 99540 + | putative plasmid transfer protein TERM 32 99607 - 99560 - f 75 -14 -3.53811 | overlap 99561 CCCACCCCGCCGAAA CCCTTTGATGGGCGGCCCGCCA CCGA CGGCGGGCCGCCCATCACCATC CCGAAGGGAACACCC TERM 33 99606 - 99561 - f 76 -17.5 -2.72144 | overlap 99560 CCACCCCGCCGAAAC CCTTTGATGGGCGGCCCGCCA CCGA CGGCGGGCCGCCCATCACCAT CCCGAAGGGAACACC traA 99624 - 101732 + | putative plasmid transfer protein, (atp/GTP-binding) SCP1.103 102063 - 102596 + | hypothetical protein SCP1.104 102859 - 103323 + | hypothetical protein TERM 34 103531 - 103569 + G 86 -22.4 -2.65264 | CTCGCGTGCTGGGAG GCATGGCCGTCGCGGCGC TCG GCGCCGCCACGGTCCTGC TGCTGTCAGTCGTCC SCP1.105 103344 - 103805 + | putative integral membrane plasmid transfer protein SCP1.106 103846 - 104439 + | hypothetical protein SCP1.107 104552 - 104935 + | hypothetical protein TERM 35 104982 - 104938 - f 95 -20.1 -3.64703 | gap 3 CGCCGGCCACTGAAA CGC-CCGGGGCGGCCGCAGGCC ACCA GACC--CGGCCGCCCCGGAGCG CCACACACATGTGCC SCP1.108 105204 - 105809 + | hypothetical protein SCP1.109 105806 - 105997 + | hypothetical protein SCP1.110 105994 - 106995 + | putative atp/GTP-binding protein SCP1.111 106992 - 107186 + | hypothetical protein SCP1.112 107224 - 107994 + | hypothetical protein SCP1.113 108078 - 108845 + | hypothetical protein SCP1.114 108842 - 109300 + | hypothetical protein SCP1.115 109297 - 109824 + | hypothetical protein TERM 36 111122 - 111070 - g 70 -16.3 -2.62396 | CAGGCCCGCACACGA GCCCGGCACCGCA-GGACCGTCAGC TCCCT GCCG-CGGCCCCTGCGCCGCCAGGC CACCGGGCGCAGGAG SCP1.116 110011 - 111153 + | ecf family sigma factor SCP1.117 111150 - 111905 + | hypothetical protein SCP1.118 112041 - 112220 + | hypothetical protein dnaN 112312 - 113430 + | DNA polymerase III subunit beta SCP1.120 113446 - 113625 + | hypothetical protein SCP1.121 113740 - 114735 + | hypothetical protein SCP1.122 114800 - 115540 + | hypothetical protein TERM 37 115658 - 115613 - f 100 -26.1 -3.28924 | opp_overlap 115617 GACCGGCGTGTAGAA CGCTGAGGCCCGTGCCCCGCG ATGT CGCGGGGCACGGGCCTCTTTG TGTTTCTGGCCCCCG TERM 38 115617 - 115654 + F 100 -34.3 -4.40003 | opp_overlap 115613 GGCGTGTAGAACGCT GAGGCCCGTGCCCCGCG ATGT CGCGGGGCACGGGCCTC TTTGTGTTTCTGGCC SCP1.123 115634 - 115759 + | hypothetical protein SCP1.124c 116042 - 115803 - | hypothetical protein SCP1.125 116467 - 118641 + | hypothetical protein TERM 39 118669 - 118706 + G 73 -2.5 -4.56597 | gap 1, overlap 118684 118687 CGTGGGAGGCCCGCT GGGAG-CACTCCGAATGC GGC GCCTACGGCGAGGCTCTC TTTTTCGACGCGCAC SCP1.126 118650 - 118886 + | hypothetical protein TERM 40 119229 - 119217 - g 73 -5.5 -4.2558 | overlap 119218 119227 TACGCTCCACCAAAA CCGTC ACA GACGA GCACGGCCGGCGCCG SCP1.127 118883 - 119662 + | hypothetical protein SCP1.128 120071 - 120868 + | hypothetical protein SCP1.129 120868 - 121305 + | hypothetical protein SCP1.130 121302 - 121631 + | hypothetical protein SCP1.131 121863 - 122663 + | hypothetical protein SCP1.132c 123343 - 122807 - | hypothetical protein SCP1.133 123685 - 123936 + | hypothetical protein SCP1.134 123923 - 124249 + | hypothetical protein SCP1.135 124246 - 125187 + | hypothetical protein SCP1.136 125272 - 127911 + | putative helicase SCP1.137c 128709 - 128413 - | hypothetical protein parA1 128828 - 130090 + | putative plasmid partitioning protein, para1 parB1 130087 - 131214 + | plasmid partitioning protein, parb1 SCP1.140 131476 - 133197 + | hypothetical protein SCP1.141 133878 - 134771 + | hypothetical protein SCP1.142 134811 - 135074 + | hypothetical protein SCP1.143 135071 - 136180 + | hypothetical protein SCP1.144 136187 - 136474 + | hypothetical protein TERM 41 136996 - 136969 - g 73 -10.4 -3.95324 | GAGCCGGAAGAAGAA CCAGCGGCCCCG TCGC CGCGGCGGCCGG CACCCATGGCGTCCG SCP1.145 136471 - 137070 + | hypothetical protein SCP1.146 137070 - 139616 + | putative atp/GTP-binding protein TERM 42 140883 - 140902 + G 79 -5.6 -4.56597 | gap 1, overlap 140884 140884 TCGTCACCGTCCTCA TC-GCCGGC CTC GCCGGCAGC TTTTTCACCGCCCAG SCP1.147 139613 - 141931 + | putative integral membrane protein SCP1.148 141924 - 143078 + | putative secreted protein SCP1.149c 144276 - 143167 - | hypothetical protein SCP1.150c 145661 - 144552 - | hypothetical protein SCP1.151c 146182 - 145658 - | putative sigma factor SCP1.152 146399 - 146851 + | hypothetical protein SCP1.153 147330 - 147803 + | putative secreted protein SCP1.154 147800 - 149980 + | putative atp/GTP-binding protein SCP1.155 149995 - 150951 + | hypothetical protein SCP1.156 150948 - 151241 + | hypothetical protein SCP1.157 151267 - 151653 + | hypothetical protein TERM 43 152507 - 152540 + G 78 -17.3 -3.14344 | opp_overlap 152500 GCAGGAGATCGGTAC GACCGCGTCCCGGCG TCTA CGCCGAGGCGCGGAC TTCCTCGCGGCCGTG SCP1.158 152373 - 153824 + | hypothetical protein SCP1.159c 154043 - 153834 - | putative oxidoreductase subunit TERM 44 154083 - 154119 + r 93 -18.8 -3.53012 | gap 1, opp_overlap 154110 GGTGCGCGCTGTCGG CTTCCGGGGCCGC-TGC CTGG GCAAGCAGCCCCGGAAG TTTCCGGGGGCCGAC SCP1.160c 155738 - 154161 - | putative oxidoreductase SCP1.161c 156988 - 156182 - | putative regulatory protein TERM 45 156620 - 156608 - G 83 -6.2 -4.72272 | CGCCTTGATCAAAAA GCCC ATCAG GGGC ACGAACCGAGCCCGG SCP1.162c 157649 - 157452 - | putative oxidoreductase subunit TERM 46 157945 - 157990 + H 72 -16.1 -2.80816 | opp_overlap 157928, overlap 157931 TTCGCCGGGGCGGCG GCTCCGGCGGTTGGATGCGCG GTGA CGTCCGTCCGACCGCTGGAGG TGTGGTGGCTGAGCC SCP1.163 157992 - 159116 + | transposase SCP1.164c 160291 - 159899 - | hypothetical protein TERM 47 159999 - 159965 - G 74 -14.2 -3.50119 | overlap 159963 GACGAACGAACAATA GGCGCGGTACTCGCTC CAT GAGCGAGGAGCGTGCC GGGATGTGCCCCCGG TERM 48 160088 - 160103 + g 78 -6.8 -4.37886 | GATGTGCATCCCCCT GGTGGC GGCA GTCACC TTTTCTGCACGCTCC SCP1.165 160942 - 161544 + | putative secreted protein/lipoprotein SCP1.166 161538 - 162440 + | putative atp/GTP-binding protein SCP1.167 162487 - 163170 + | hypothetical protein TERM 49 163737 - 163719 - g 71 -4.4 -4.25104 | opp_overlap 163724 CGCCCTGCACGAAAA CGGCTCCG GCG CGGACGCG CTCGGTCTCCTCCTC SCP1.168 163174 - 164052 + | hypothetical protein SCP1.169 164045 - 165658 + | putative atp/GTP-binding protein SCP1.170 165702 - 166694 + | putative integral membrane protein SCP1.171 166691 - 167584 + | putative integral membrane protein SCP1.172 167601 - 167792 + | putative integral membrane protein SCP1.173 167825 - 168244 + | hypothetical protein SCP1.174 168241 - 168684 + | hypothetical protein SCP1.175 168681 - 169124 + | hypothetical protein TERM 50 171983 - 171999 + G 85 -10.1 -4.25283 | overlap 171968 GGACGAGCCCACCCT GAGCGGC CCG GCCGTTC TTTTCCTGGGGCCGT SCP1.176 169131 - 172742 + | putative large membrane protein TERM 51 173368 - 173356 - g 76 -10.5 -4.07885 | opp_overlap 173361, overlap 173330 173329 TACTGCTCCGCAAAA CGGCG AGG CGCCG CCTTGACGCCCTCTA SCP1.177 173067 - 173675 + | hypothetical protein SCP1.178 173797 - 174033 + | hypothetical protein SCP1.179 174030 - 174191 + | hypothetical protein SCP1.180 174205 - 174516 + | hypothetical protein SCP1.182 175779 - 176534 + | hypothetical protein SCP1.183 176599 - 177141 + | hypothetical protein SCP1.183c 177917 - 177213 - | hypothetical protein SCP1.184 178160 - 178438 + | hypothetical protein SCP1.185 178395 - 178949 + | hypothetical protein TERM 52 179026 - 178987 - g 79 -16.4 -3.32844 | gap 1 TCGTCCAGCGCACAA GC-GGCCCGTGAGGCGCTC GCC GTGCGCCTCACGCACCTGC GCAAGGACGCCGGAC SCP1.186 178957 - 179805 + | hypothetical protein TERM 53 179980 - 180011 + G 70 -16 -2.56095 | gap 1, overlap 179976 AAGGCTGCGCACCCC GGA-CTTTGCCGCCT CCA AGGCGGCGAAGCTCC TGGATTCCGTCTCGC SCP1.187 179960 - 180511 + | hypothetical protein SCP1.188c 180781 - 180497 - | hypothetical protein SCP1.189 181083 - 182222 + | hypothetical protein SCP1.190c 183168 - 182335 - | putative integrase/recombinase SCP1.191 183470 - 183649 + | hypothetical protein SCP1.192 183646 - 184086 + | hypothetical protein TERM 54 184335 - 184351 + F 93 -2.1 -5.40474 | overlap 184337 184340 CCAGGCTTCTGAGGG CGGTGCC AGT GGCAGGG TTTTTTTGAGAACGT SCP1.194 184494 - 185051 + | hypothetical protein SCP1.195c 186707 - 185658 - | putative atp/GTP-binding protein TERM 55 187300 - 187312 + G 79 -6.2 -4.56597 | overlap 187297 ACAGATGCCTGTGCC GCGC TGGCT GCGC TTTTTGACCGACACC SCP1.196 186710 - 188230 + | putative DNA primase/helicase SCP1.197 188227 - 188628 + | hypothetical protein SCP1.198 188734 - 189642 + | hypothetical protein SCP1.199c 191446 - 189929 - | putative secreted esterase TERM 56 190453 - 190487 + g 72 -12 -3.68506 | overlap 190454 CCGTGTAGAGGTTGA GGGTGCCGTCGCTGCG CAC CGCTGCGATGTCACCG TTTCCGTCGCTGTTG SCP1.200c 192337 - 191837 - | putative secreted protein TERM 57 192913 - 192899 - H 100 -10 -5.30616 | GGAGCGAAACAAAAA TCGTGG TTT CCACGA CGGTCCCTACAGGTC TERM 58 194343 - 194315 - g 81 -11.8 -4.18934 | gap 1 GAGCATGCGAACAAA GCTGCGGACTACG CGGA CG-AATCCGCAGC ACACGCCGGAGACTC TERM 59 196562 - 196552 - g 80 -3.2 -4.68424 | CAAGGCATGGAAAAA GCTC CCT AAGC GCAAGAGCGGGGACC SCP1.201 192944 - 196954 + | hypothetical protein SCP1.202 196963 - 197466 + | hypothetical protein TERM 60 197521 - 197469 - T 79 -15.8 -3.30159 | gap 3, overlap 197474 197510 TCAATCGGTCTAGAA CAGTACGTGCGACGTT-GCTCCCGC CCCAGC GCGGGGGCAAACGTCGCACG--CTG TAGCTCGCCGACGCC TERM 61 197518 - 197474 - T 90 -22.3 -2.80074 | gap 1, overlap 197469 197510 CGGTCTAGAACAGTA CGTGCGACGTT-GCTCCCGC CCCAGC GCGGGGGCAAACGTCGCACG CTGTAGCTCGCCGAC SCP1.203c 198614 - 198102 - | hypothetical protein SCP1.204c 200354 - 198693 - | hypothetical protein TERM 62 198774 - 198810 + g 72 -14.4 -3.36749 | gap 2, overlap 198808 GCGCATCGTCACGGT GGCGTGCCCGTGCGCGGC GAG GTCGCGC-CGGGC-CTCC TTCATGTTGAGGATC SCP1.205c 203101 - 200576 - | hypothetical protein TERM 63 202416 - 202395 - G 75 -12.9 -3.6869 | opp_overlap 202405 CACACGAATTCGAAA GCCCGCTCC GTCC GGTGCGGGC GCAGGATCTTCAGCA TERM 64 203119 - 203156 + r 75 -14 -3.47403 | overlap 203120 CGATGTCCCCTCTCC CTTGCCCAGGCGGCGC GCCATG GCGCCGCCTGGGCCCC TTCGTTGTCCATTCC TERM 65 203120 - 203155 + r 75 -17.5 -2.6796 | overlap 203119 GATGTCCCCTCTCCC TTGCCCAGGCGGCGC GCCATG GCGCCGCCTGGGCCC CTTCGTTGTCCATTC SCP1.206c 203841 - 203314 - | hypothetical protein SCP1.207c 206540 - 203838 - | hypothetical protein TERM 66 206852 - 206826 - H 79 -13.7 -3.61902 | gap 1, overlap 206823 TGTGACCAGACAGAA GCGCCG-CCCCC ACCC GGGGGTCGGCAC GAAAGGAGACCGACC SCP1.208 207016 - 208056 + | hypothetical protein SCP1.209c 209366 - 208371 - | hypothetical protein SCP1.210c 209709 - 209380 - | hypothetical protein SCP1.211c 210534 - 210103 - | hypothetical protein TERM 67 210202 - 210175 - G 93 -18.4 -3.61398 | CCCGGCGCTCAAGAA GGGGCCGCCCAC CATC ACGGGCGGCCCC TTCCACGCCCCCGGC TERM 68 210931 - 210874 - H 91 -17.5 -3.73775 | overlap 210875 210878 CGGAGGTCGACGAAA CCTACGGGACAGGACCGGCCGTCGGGC GTCT GCCCGGCGGCCGGTCCTGCGTCGTCCT CGCCCGTCTGCGGCT TERM 69 210930 - 210875 - H 90 -21 -2.84051 | overlap 210874 210878 GGAGGTCGACGAAAC CTACGGGACAGGACCGGCCGTCGGGC GTCT GCCCGGCGGCCGGTCCTGCGTCGTCC TCGCCCGTCTGCGGC TERM 70 210927 - 210878 - H 100 -27.1 -2.67803 | overlap 210875 210874 GGTCGACGAAACCTA CGGGACAGGACCGGCCGTCGGGC GTCT GCCCGGCGGCCGGTCCTGCGTCG TCCTCGCCCGTCTGC SCP1.212 211100 - 212794 + | putative bifunctional undecaprenyl pyrophosphate synthetase/phytoene synthase SCP1.213c 213495 - 212818 - | putative secreted protein SCP1.214 213631 - 214053 + | putative transposase TERM 71 214119 - 214061 - g 73 -15.1 -3.21099 | gap 1, overlap 214062 CGGGCTGACCACCAA GGTCCATCTCGCCTGCGACGGCC-GGGG CCTG CCCCTGGCCGTCGCAGTCACGCCGGGCA ACGTCAACGACTCCA TERM 72 214118 - 214062 - g 76 -18.6 -2.52516 | gap 1, overlap 214061 GGGCTGACCACCAAG GTCCATCTCGCCTGCGACGGCC-GGGG CCTG CCCCTGGCCGTCGCAGTCACGCCGGGC AACGTCAACGACTCC SCP1.215 214050 - 214520 + | putative transposase SCP1.216 214585 - 215106 + | hypothetical protein SCP1.216Ac 217487 - 215655 - | putative helicase SCP1.217 217465 - 217674 + | hypothetical protein TERM 73 217736 - 217684 - TR 93 -23.4 -2.93723 | opp_overlap 217730, overlap 217679 217687 217712 GGCTGAGCAAGGACA CCAGCCGAGAGGGGCGCGAGAGAC TCAAG GGCTCTCGCGCCCCTCTCGGCATT CAGGGCCGTGCTTCG TERM 74 217733 - 217687 - TR 100 -33.9 -2.70936 | opp_overlap 217730, overlap 217684 217679 217712 TGAGCAAGGACACCA GCCGAGAGGGGCGCGAGAGAC TCAAG GGCTCTCGCGCCCCTCTCGGC ATTCAGGGCCGTGCT TERM 75 217786 - 217809 + Tr 85 -15.4 -3.85698 | opp_overlap 217779 217777 GATCAAGATGTGAAG CGATCCGACT CTGG AGTCGGATCG TTTCTCCGCGAGCGA SCP1.217Ac 219094 - 217949 - | hypothetical protein SCP1.218c 219700 - 219314 - | hypothetical protein SCP1.219 219981 - 220502 + | hypothetical protein parA2 221485 - 222648 + | putative plasmid partitioning protein, para2 parB2 222645 - 223790 + | putative plasmid partitioning protein, parb2 TERM 76 223808 - 223846 + T 89 -22.5 -2.62184 | gap 1, opp_overlap 223790 GCGCTGCATCCCACA CGGCCCCACGCGCCCTCA TCCG TGAGG-CGCGCGGGGCCG TGCTGTCCAACCGAA SCP1.223c 224353 - 224000 - | hypothetical protein dnaE 227991 - 224350 - | DNA polymerase III subunit alpha TERM 77 228579 - 228548 - H 74 -7.3 -4.20932 | gap 2 AAGATGCAGGTAAAA GAGTCTGCTCCCCGC ACGC GCGGGG-GTAG-CTC CCTCGAGCTGCACGG 23.ORF4 228782 - 229135 + | hypothetical protein 23.ORF3 229132 - 229518 + | hypothetical protein 23.ORF2 229671 - 230153 + | hypothetical protein 23.ORF1 230964 - 230263 - | hypothetical protein mmyF 232200 - 231676 - | putative oxidoreductase, mmyf mmyY 232692 - 232231 - | hypothetical protein TERM 78 232903 - 232892 - H 95 -4.4 -5.28778 | opp_overlap 232892 ACGAGTCATAAAAAA CCTT CGGG AAGG TTTGACACTGTGAGG mmyB 232923 - 233864 + | putative DNA-binding protein, mmyb mmyQ 233951 - 234604 + | hypothetical protein mmyE 234674 - 235837 + | putative enoyl reductase, mmye TERM 79 235899 - 235861 - f 88 -20.9 -2.62263 | opp_overlap 235893 AGGGCGGTGACACCA CGGCCCGGGTCCGCTCC TCACG GGGGCGGGCCCGGGCCA CGCGCTGAGGGAGCG mmyD 236410 - 237429 + | hypothetical protein mmyX 237541 - 238245 + | putative atp/GTP-binding protein, mmyx mmyC 238242 - 239240 + | 3-oxoacyl-(acyl carrier protein) synthase III mmyA 239304 - 239552 + | putative acyl carrier protein, mmya TERM 80 239593 - 239637 + F 100 -35.9 -3.44146 | opp_overlap 239584 CAAGGAGCGATGACC GACCCGGGTGGGGAGGGTGCC GGT GGTGCCCTCCCCACCCGGGTC TTCCTTCTACCGACC mmyP 239676 - 240374 + | hypothetical protein mmyK 240371 - 240991 + | putative atp/GTP-binding protein, mmyk TERM 81 241034 - 241004 - T 100 -28.4 -3.52896 | TGAGCAGGGACAGAA GCAGGGGCCCCGAC CGT GTCGGGGCCCCTGC ACGGGTTGCGGGCGT mmr 242481 - 241054 - | methylenomycin a resistance protein, mmr TERM 82 242609 - 242643 + H 70 -10 -3.7829 | opp_overlap 242602 242612, overlap 242634 TCACTGAAGCTCATA TGACGACGGCTGTCAA ACT TTGATGGCCGTCAACA TTTGATGGCTGTCGT mmyJ 242698 - 243033 + | hypothetical protein mmyG 244177 - 242996 - | putative oxidoreductase, mmyg mmyO 245381 - 244260 - | putative monooxygenase, mmyo mmyT 246221 - 245412 - | putative thioesterase, mmyt TERM 83 246261 - 246208 - G 82 -9.6 -4.30576 | gap 3, overlap 246213 246215 CCTGCATGATGAAAA CAGAACAGACGCAACGCTGCGGCCGGG GCT CCCGTCCGC-GCGCTG-GTC-GTCGCG GTGTCCGCAATCATG TERM 84 246256 - 246213 - G 82 -12.5 -4.00084 | gap 3, overlap 246208 246215 ATGATGAAAACAGAA CAGACGCAACGCTGCGGCCGGG GCT CCCGTCCGC-GCGCTG-GTC-G TCGCGGTGTCCGCAA TERM 85 246255 - 246215 - G 86 -16.2 -3.57985 | gap 2, overlap 246213 246208 GATGAAAACAGAACA GACGCAACGCTGCGGCCGGG GCT CCCGTCCGC-GCGCTG-GTC GTCGCGGTGTCCGCA mmfR 247006 - 246362 - | TetR family transcriptional regulator mmfL 247201 - 248262 + | putative lactone biosynthesis protein, mmfl mmfH 248259 - 249461 + | putative oxidoreductase, mmfh TERM 86 249710 - 249728 + G 72 -12.4 -3.6682 | overlap 249712 ATGAACCGCGTCTAC TACCGGCG CTA CGCCGGTG TTTCCCTGGCTCGCC TERM 87 249712 - 249726 + G 70 -12.8 -3.41569 | overlap 249710 GAACCGCGTCTACTA CCGGCG CTA CGCCGG TGTTTCCCTGGCTCG mmfP 249458 - 250255 + | hypothetical protein mmyR 250406 - 251017 + | TetR family transcriptional regulator SCP1.247c 251561 - 251127 - | hypothetical protein SCP1.248c 251804 - 251565 - | hypothetical protein SCP1.249c 252324 - 251995 - | hypothetical protein SCP1.250 252528 - 252950 + | hypothetical protein TERM 88 253295 - 253263 - g 73 -2 -4.49939 | gap 1, overlap 253226 AGACAAGGCAGAAAA CGACGTTGAGC-ATG CCGT CATCGCTCACTATCG ACTGGCCGATGACGG SCP1.251 253207 - 253575 + | hypothetical protein SCP1.252c 254249 - 253719 - | hypothetical protein SCP1.253 254385 - 255002 + | hypothetical protein SCP1.254c 255909 - 255286 - | hypothetical protein SCP1.255c 256288 - 255857 - | hypothetical protein SCP1.256c 256613 - 256449 - | hypothetical protein TERM 89 256851 - 256803 - H 70 -9.4 -3.85698 | gap 1, opp_overlap 256814, overlap 256804 CGTCGTCTCCATAAA CCGGTCGTCCGGTCGGCAGTG TGTGGCTG CGCGGCCGACCGGCCG-CCGC TGCACCACGCACAAC SCP1.257 256995 - 257408 + | hypothetical protein SCP1.258c 258045 - 257545 - | hypothetical protein SCP1.259 258163 - 259413 + | putative transposon transposase SCP1.260 259437 - 259787 + | hypothetical protein SCP1.261c 260555 - 260052 - | putative secreted protein SCP1.262 260796 - 261038 + | hypothetical protein SCP1.263c 261547 - 261236 - | hypothetical protein TERM 90 261656 - 261629 - H 100 -24.2 -3.14683 | ACAGCTGGGTATCAA GCCCTCGGCCGG TGCA CCGGCCGAGGGC AGCCGAGGGGGACCG SCP1.264 261683 - 263065 + | hypothetical protein TERM 91 263223 - 263281 + T 72 -12.4 -3.53012 | gap 3, opp_overlap 263192 263264 263265, overlap 263191 263223 AGAAGTTTGACTTCC GC-GCTTGCGGCCGGCCGTCTTGGCCCGG CCCG CCCGGCAAAG-TGGCCGGCC-CCGGCGGC TTTGGGCCCGGAGGG SCP1.265c 264000 - 263311 - | hypothetical protein TERM 92 263964 - 263996 + g 70 -17 -2.62396 | gap 1 CCTGGACCGGGCCAA GGCGGCGCGACCCGC AGTT GCGGGT-GCGCGGCC TCATCTACAGGCGTC SCP1.266c 264486 - 264034 - | hypothetical protein SCP1.267 264803 - 265462 + | putative secreted protein SCP1.268 265459 - 265794 + | hypothetical protein SCP1.269 265831 - 266202 + | putative secreted protein SCP1.270 266354 - 266644 + | hypothetical protein SCP1.271 266719 - 266880 + | hypothetical protein SCP1.272c 267342 - 266896 - | hypothetical protein TERM 93 267435 - 267475 + r 81 -13.2 -3.9642 | gap 1, opp_overlap 267438, overlap 267437 267460 GAAGCGATCGACATT G-AAGGCCCCCGCCGGCAC TGGT GTACCGCCGGGGGCCGTGC TTTCGTTGGGTCTTT TERM 94 267437 - 267472 + r 75 -16 -3.02881 | opp_overlap 267438, overlap 267435 267460 AGCGATCGACATTGA AGGCCCCCGCCGGCAC TGGT GTACCGCCGGGGGCCG TGCTTTCGTTGGGTC TERM 95 267471 - 267438 - R 93 -21.7 -3.1355 | opp_overlap 267437 267435 267460 GCGATCGACATTGAA GGCCCCCGCCGGCAC TGGT GTACCGCCGGGGGCC GTGCTTTCGTTGGGT SCP1.273c 270675 - 267556 - | putative large secreted protein TERM 96 268157 - 268181 + g 76 -10.7 -4.03078 | overlap 268153 TGGTGCCCGACGGAG CAGGTTCCGCT GCC AGCGGGGTCTG TTTCTCCTGTCGTGC TERM 97 268879 - 268893 + g 70 -12.8 -3.33696 | CTTCCAGGCGAAGGC GCCGCC AGC GGCGGC TTCCTTGGCAGCAAG TERM 98 271157 - 271138 - g 71 -15 -3.05463 | AGCTTGCTCAGTGAA CCCGTGGC CGCT GCCACGGG CCTGGCGCTGCGTGA TERM 99 277296 - 277279 - g 88 -4.1 -5.06451 | overlap 277282 GATTACGGGAAAAAA CTATACG ATCA CGTAAAG GGCCTCTGGTAGCAG SCP1.274 271060 - 277308 + | putative large secreted protein SCP1.275 277758 - 278123 + | hypothetical protein SCP1.276 279323 - 280864 + | insertion element is466s transposase SCP1.277 280963 - 281178 + | hypothetical protein SCP1.278 281951 - 282247 + | hypothetical protein TERM 100 282419 - 282460 + T 81 -18 -3.12668 | gap 1 GACGGCCAGCCCTCA GCCAGGGCCCCTGC-GGCG TACGC CACCAGCACGGGCCCTGGC TTCACTGTGACCCTG SCP1.279c 283740 - 282655 - | hypothetical protein TERM 101 283170 - 283186 + g 82 -13.7 -3.86202 | CGCGGCGCTCGGCGA GGAGCGC GTA GCGCTCC TTTCGTGTGCTGAGG TERM 102 284872 - 284833 - g 79 -13.6 -3.58343 | gap 1, overlap 284834 GCCACCATCGTCAAA CGCGGACGGCT-GTTGCAC GCC GCACAACGAGCCGACCGCA ACCCCTACAAGGTGC SCP1.280 283966 - 285579 + | hypothetical protein SCP1.281 285645 - 286310 + | hypothetical protein TERM 103 286475 - 286421 - g 77 -16 -3.28924 | gap 3, overlap 286422 GATCCTCGTCGAGAA GCCCGAGTT--CGGAGCACCGTCACGG CAGG CCGTGACGGTGCTCCGTGAACTCAC-C GAACCGGAAACCAGC TERM 104 286475 - 286422 - g 70 -16.2 -2.57211 | gap 2, overlap 286421 ATCCTCGTCGAGAAG CCCGAGTT--CGGAGCACCGTCACGG CAGG CCGTGACGGTGCTCCGTGAACTCACC GAACCGGAAACCAGC SCP1.282 286320 - 286571 + | hypothetical protein SCP1.283 286639 - 286803 + | hypothetical protein SCP1.284 287152 - 287499 + | hypothetical protein SCP1.285c 288471 - 287572 - | hypothetical protein TERM 105 288972 - 288951 - g 81 -18.7 -3.04144 | GGCGGAGCGGGAAGA GCGCGCCGC CGAG GCGGCGCGC GAGCTCGGCGTCGAG SCP1.286 288811 - 289065 + | hypothetical protein SCP1.287 289068 - 289436 + | hypothetical protein SCP1.288c 292125 - 289447 - | putative atp/GTP-binding protein SCP1.289 292322 - 292597 + | hypothetical protein SCP1.290c 294369 - 292561 - | putative atp/GTP-binding protein SCP1.291c 294880 - 294467 - | hypothetical protein SCP1.292c 295505 - 295281 - | putative regulatory protein SCP1.293c 296374 - 295502 - | putative DNA-binding protein SCP1.294 296628 - 297104 + | hypothetical protein SCP1.295 297122 - 297565 + | putative regulatory protein TERM 106 297952 - 297972 + G 70 -13.9 -3.28712 | CTGCCGTCCCTGAAC CGGGCCGTG CCG CCCGGCCCG TTCTGGCACCGGCCC SCP1.296 297562 - 298101 + | hypothetical protein sapC 298131 - 298583 + | spore associated protein, sapc SCP1.299 298580 - 299404 + | putative hydratase SCP1.300 299431 - 300312 + | acetaldehyde dehydrogenase SCP1.301 300309 - 301325 + | 4-hydroxy-2-ketovalerate aldolase SCP1.302 301322 - 302185 + | putative lysase sapE 302182 - 302706 + | spore associated protein, sape sapD 302723 - 303925 + | spore associated protein, sapd SCP1.305 304016 - 304906 + | hypothetical protein SCP1.306 304950 - 305606 + | hypothetical protein SCP1.307c 306293 - 305883 - | hypothetical protein TERM 107 310254 - 310238 - R 71 -8.7 -4.13945 | opp_overlap 310226 ACCTGGATTTGAAAA CCACTTC TAC GAAGCGG TACGCGCCCGGGGTC SCP1.309c 312560 - 310923 - | putative integral membrane efflux protein SCP1.310c 313671 - 312655 - | putative oxidoreductase SCP1.311c 315089 - 314274 - | short chain dehydrogenase SCP1.312 315270 - 315917 + | TetR family regulatory protein SCP1.313 316820 - 318055 + | hypothetical protein SCP1.314 318859 - 319116 + | hypothetical protein SCP1.315 319119 - 319538 + | hypothetical protein SCP1.316 319607 - 320569 + | putative transposase SCP1.317c 321857 - 320862 - | putative short-chain oxidoreductase SCP1.318 321944 - 322858 + | AraC family transcriptional regulator SCP1.319c 323468 - 323169 - | hypothetical protein SCP1.320c 324563 - 323625 - | putative integral membrane protein SCP1.321 324753 - 325778 + | hypothetical protein SCP1.322 325805 - 326185 + | hypothetical protein SCP1.323c 326899 - 326240 - | putative secreted protein SCP1.324 327133 - 327696 + | hypothetical protein SCP1.325c 328332 - 327874 - | hypothetical protein SCP1.326 329148 - 329501 + | hypothetical protein SCP1.327 329554 - 332925 + | hypothetical protein SCP1.328 333120 - 333962 + | hypothetical protein SCP1.329 334686 - 335750 + | hypothetical protein TERM 108 335799 - 335834 + T 100 -28.4 -3.18264 | AGGCTGATCGCTTCG GGGCCCGGGTCACCAG AACT CTGGTGGCCCGGGCCC TTCATCGCTACCGCC SCP1.330c 336104 - 335859 - | hypothetical protein SCP1.331 336316 - 336450 + | hypothetical protein SCP1.332 336438 - 336671 + | hypothetical protein SCP1.333 336746 - 337603 + | hypothetical protein TERM 109 337831 - 337786 - g 71 -4.5 -4.25104 | gap 1 GCCCGGGCAGCAAAA GCCGCCACCCAGGCCCG-CGAC CGC GTCGACGAGCACGCGCGTCAAC GCCCCACCGCCCAGG SCP1.334 337624 - 338406 + | hypothetical protein SCP1.335 338412 - 339638 + | putative DNA integrase/recombinase SCP1.336 339730 - 342081 + | putative DNA integrase/recombinase SCP1.337c 342935 - 342117 - | hypothetical protein SCP1.338 343078 - 343662 + | hypothetical protein SCP1.339c 344334 - 344110 - | hypothetical protein TERM 110 344545 - 344531 - H 80 -11.4 -4.07568 | GGGGGGCCTCTAAAA CCGGTC CGC GACCGG TGCGGGCGCCGCTAC SCP1.340 344594 - 345742 + | hypothetical protein SCP1.341 345775 - 347391 + | hypothetical protein SCP1.342 347434 - 347889 + | hypothetical protein TERM 111 348160 - 348172 + G 86 -4.8 -4.91109 | ACCTATGGAGCCCCA CCCA CGGTC TGGG TTTTTGTAATCGCCA SCP1.343 347886 - 348629 + | hypothetical protein SCP1.344c 349247 - 348753 - | hypothetical protein TERM 112 349414 - 349428 + H 74 -10 -4.06055 | TGTACCGGCCGCCGG GAGCAG CAA CTGCTC TTTCCTTTCCCGGGT SCP1.345 349843 - 350508 + | hypothetical protein SCP1.346 350584 - 351105 + | hypothetical protein SCP1.347 351102 - 351395 + | hypothetical protein SCP1.348 351392 - 351616 + | hypothetical protein SCP1.349 352205 - 352600 + | hypothetical protein SCP1.350 352679 - 352915 + | hypothetical protein SCP1.351 352903 - 353121 + | hypothetical protein SCP1.352 353212 - 354417 + | hypothetical protein TERM 113 354464 - 354427 - f 93 -22.7 -3.16564 | overlap 354430 GCCTGACCCGAGCAA GGACCGGCGGGCACGGC ACTG ACCGTGCCCGCCGGCAC TTCGCCCCACACGAG TERM 114 354461 - 354430 - f 95 -25.2 -2.78547 | overlap 354427 TGACCCGAGCAAGGA CCGGCGGGCACGGC ACTG ACCGTGCCCGCCGG CACTTCGCCCCACAC SCP1.353 354502 - 355125 + | hypothetical protein SEQUENCE gi|21233964|ref|NC_003904.1| Streptomyces coelicolor A3(2) plasmid SCP2, complete sequence (length 31317) TERM 1 868 - 858 - g 89 -4.6 -5.00616 | overlap 864 CGGGTCCCGAAAAAA GGAC AAC GCCC CGGCACCACCGCCCC TERM 2 911 - 864 - g 71 -10.6 -3.81575 | gap 3, overlap 858 CCGAAAAAAGGACAA CGCCCCGGCACCA-CCG--CCCC GACGA GGGACTCGGACGGTCCCGGGGCG GCCTGACCTGCAAGA SCP2.01 492 - 917 + | putative is1648 transposase TERM 3 1215 - 1165 - g 82 -20.2 -2.78712 | overlap 1162 1199 CCCGGAACCGAAGGA CCAGCGGGCCAACCGCCGCCGCAG AGG CAGAGAAGGCGGCAGGCCCGCCGG CTTCGACCGGGACCA SCP2.02 914 - 1372 + | putative is1648 transposase TERM 4 1629 - 1665 + T 76 -12.1 -3.72893 | opp_overlap 1613, overlap 1629 CGGGGACGGGTTTCC GGGCGCCGGTTCACCGG TCG CCGGAGGACTGGGCCCC TTTAGTAAGAACATC TERM 5 2251 - 2309 + T 73 -13.7 -3.40403 | gap 1, overlap 2237 2260 2262 CCCGCTCGGCGTCGG -CGTTCGTGGGGCGCGCGGCGCGGCGGC GGTT GTCGCTGCTCCGCGCGTCTTGCGTAGGC TTCTCCTAGACCGGC TERM 6 2260 - 2299 + T 93 -22.8 -3.08471 | overlap 2237 2251 2262 CGTCGGCGTTCGTGG GGCGCGCGGCGCGGCGGC GGTT GTCGCTGCTCCGCGCGTC TTGCGTAGGCTTCTC TERM 7 2262 - 2297 + T 93 -21.8 -3.09803 | overlap 2237 2260 2251 TCGGCGTTCGTGGGG CGCGCGGCGCGGCGGC GGTT GTCGCTGCTCCGCGCG TCTTGCGTAGGCTTC TERM 8 2472 - 2434 - T 90 -13.1 -4.2558 | gap 1, overlap 2435 2437 CACCCGGGAGGAAAA CGACCAGCGGCCCCCTGC GCCA ACAGGGGGCCGCCCG-CA TAGTCCGACAGTCCT TERM 9 2471 - 2435 - T 70 -14.4 -3.15027 | gap 1, overlap 2434 2437 ACCCGGGAGGAAAAC GACCAGCGGCCCCCTGC GCCA ACAGGGGGCCGCCCG-C ATAGTCCGACAGTCC TERM 10 2470 - 2437 - T 81 -18.1 -3.13504 | overlap 2435 2434 CCGGGAGGAAAACGA CCAGCGGCCCCCTGC GCCA ACAGGGGGCCGCCCG CATAGTCCGACAGTC SCP2.04c 4010 - 3033 - | hypothetical protein parA 4939 - 4007 - | putative partitioning protein para TERM 11 5266 - 5229 - H 72 -15.6 -2.73875 | gap 1, opp_overlap 5228, overlap 5226 GGGCGGCGAACACGA CGAGGGGGCCGCGCCAA CCTCC CCGGCACGGCCCC-TCG GTCTGTCGGCGCCCC TERM 12 5270 - 5308 + H 81 -18 -3.03441 | CACGGCCCCTCGGTC TGTCGGCGCCCCGTCGTC CAG GTCGGCGGGGCGCCGGGG TGTTCAGCCCTCCTG SCP2.06 5557 - 5886 + | hypothetical protein SCP2.07c 7050 - 5935 - | putative integrase/recombinase TERM 13 6562 - 6598 + g 70 -13.6 -3.28712 | gap 1 GATCTGCGGGGGGAG GGCGGCGGTCGC-CTGG CGGG CCTGCGCGGCCTCCGCC TTCTCCACGGCGAGC SCP2.08 7201 - 7386 + | hypothetical protein SCP2.09c 7782 - 7612 - | hypothetical protein SCP2.10c 9286 - 8441 - | putative tn5714 transposase TERM 14 9088 - 9106 + g 74 -11.6 -3.77206 | overlap 9089 GCCAGGGCGGATAGT CGGCGGGC AGG GCCCGCCA TTTGATGCCGTTGTC SCP2.11c 9726 - 9304 - | Tn5714 hypothetical protein SCP2.12c 10732 - 9731 - | Tn5714 hypothetical protein TERM 15 11195 - 11161 - R 100 -30.2 -3.67611 | opp_overlap 11155 11154 CGCACCCGAACAGAA CATCGCTGCCGCCGAC TTC GTCGGCGGCAGCGATG CCCCACATTCTCGGC SCP2.13c 11867 - 11298 - | hypothetical protein TERM 16 11623 - 11648 + g 88 -3.3 -5.0538 | gap 2 CGGTGAGCGGCTTCC CGCTC--CCGC CAGAAC GCGGCCGAGCG TTTTTTCCAGTCGGC SCP2.14c 14739 - 13054 - | putative DNA-binding protein SCP2.15c 15175 - 14867 - | putative DNA-binding protein TERM 17 15247 - 15205 - R 100 -28.5 -4.7497 | gap 1, overlap 15177 GGGACGCACGAAAAA GGCCCCCGGCCGCGCCCCTC GTCG GAGGGG-GCGGCGGGGGGCC TCAGTGGAGGATGTC SCP2.16c 15611 - 15261 - | hypothetical protein SCP2.17c 15957 - 15706 - | hypothetical protein SCP2.18c 16295 - 15954 - | hypothetical protein SCP2.19c 16860 - 16318 - | hypothetical protein TERM 18 16931 - 16884 - R 71 -15.4 -3.06696 | gap 1, overlap 16882 CCGGCGGGGAAGAGA GGGCCGGGCCCCCGGCG-GCCGT CGT AAGGCGCGTCAGGGGCCCGGCGA GGGGTGCGGGGTCAG traA 18379 - 16943 - | major plasmid transfer protein, traa traX 19254 - 18379 - | plasmid transfer protein TraX traB 19745 - 19332 - | plasmid transfer protein TraB SCP2.23c 21883 - 19751 - | putative glycine-rich protein TERM 19 21691 - 21710 + g 74 -16.4 -3.14132 | CGGCGGCGAGGGAGT CGGCCGCC GACG GGCGGCCG TTGCTGGCGGGAACG SCP2.24c 22269 - 22012 - | hypothetical protein SCP2.25c 22772 - 22266 - | putative alanine-rich protein TERM 20 22889 - 22942 + r 78 -12.3 -3.99592 | gap 1, opp_overlap 22892 22894 22896, overlap 22891 22899 AGGCCGTGTCTGGAA AAACAGACACG-CGAGGGGCGGCCCG GTG TGGGCCGCCCCTCGGTGTGGTGGGTG TTTGTGCTGGTCAGT TERM 21 22891 - 22940 + r 82 -14.9 -3.58864 | gap 1, opp_overlap 22892 22894 22896, overlap 22889 22899 GCCGTGTCTGGAAAA ACAGACACG-CGAGGGGCGGCCCG GTG TGGGCCGCCCCTCGGTGTGGTGGG TGTTTGTGCTGGTCA TERM 22 22938 - 22892 - R 100 -19.6 -4.56597 | opp_overlap 22891 22889 22899, overlap 22894 22896 CCGTGTCTGGAAAAA CA-GACACGCGAGGGGCGGCCC GGTGT GGGCCGCCCCTCG-GTGTGGTG GGTGTTTGTGCTGGT TERM 23 22935 - 22894 - R 100 -22.4 -3.90048 | gap 1, opp_overlap 22891 22889 22899, overlap 22892 22896 GTGTCTGGAAAAACA GACACGCGAGGGGCGGCCC GGTGT GGGCCGCCCCTCG-GTGTG GTGGGTGTTTGTGCT TERM 24 22933 - 22896 - R 100 -25 -3.53855 | gap 1, opp_overlap 22891 22889 22899, overlap 22894 22892 GTCTGGAAAAACAGA CACGCGAGGGGCGGCCC GGTGT GGGCCGCCCCTCG-GTG TGGTGGGTGTTTGTG TERM 25 22899 - 22931 + r 90 -22.7 -2.83701 | opp_overlap 22896 22894 22892, overlap 22891 22889 TGGAAAAACAGACAC GCGAGGGGCGGCCCG GTG TGGGCCGCCCCTCGG TGTGGTGGGTGTTTG SCP2.27c 24778 - 23177 - | hypothetical protein SCP2.28c 25078 - 24875 - | hypothetical protein SCP2.30c 25319 - 25224 - | hypothetical protein SCP2.31c 25702 - 25412 - | hypothetical protein SCP2.32c 26253 - 25774 - | hypothetical protein SCP2.35 26665 - 27462 + | GntR family regulatory protein SCP2.36 27459 - 27794 + | hypothetical protein TERM 26 27854 - 27816 - f 89 -21.8 -2.62184 | opp_overlap 27818, overlap 27818 CCCGCCCGGACACGA GACCGCCCCCCTTCCG CAGCCAC CGGAACGGGGGCGGTC CTATGCCGCACCAGA TERM 27 27852 - 27818 - f 80 -18.6 -2.85351 | opp_overlap 27818, overlap 27816 CGCCCGGACACGAGA CCGCCCCCCTTCCG CAGCCAC CGGAACGGGGGCGG TCCTATGCCGCACCA TERM 28 27818 - 27852 + F 78 -18.6 -2.62184 | opp_overlap 27818 27816 CGCCCGGACACGAGA CCGCCCCCCTTCCG CAGCCAC CGGAACGGGGGCGG TCCTATGCCGCACCA SCP2.37 27897 - 28481 + | hypothetical protein TERM 29 28497 - 28540 + T 100 -21 -3.32844 | opp_overlap 28498 28501, overlap 28499 CCGTCTGGCACATAG ATCAGCGCCCCCGCTCCG TGGGAGAT CGGAGCGGGGGCGCTGTG TTGTGCGGTCAAGAG TERM 30 28539 - 28498 - T 95 -24.5 -2.98823 | opp_overlap 28497 28499, overlap 28501 CGTCTGGCACATAGA TCAGCGCCCCCGCTCCG TGGGAGAT CGGAGCGGGGGCGCTGT GTTGTGCGGTCAAGA TERM 31 28499 - 28538 + T 100 -28 -3.23393 | opp_overlap 28498 28501, overlap 28497 GTCTGGCACATAGAT CAGCGCCCCCGCTCCG TGGGAGAT CGGAGCGGGGGCGCTG TGTTGTGCGGTCAAG TERM 32 28536 - 28501 - T 95 -24.8 -2.72799 | opp_overlap 28499 28497, overlap 28498 CTGGCACATAGATCA GCGCCCCCGCTCCG TGGGAGAT CGGAGCGGGGGCGC TGTGTTGTGCGGTCA SCP2.38c 28959 - 28549 - | hypothetical protein SCP2.39c 29450 - 28965 - | putative regulatory protein