TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.678766 %AT, 1537373 nt, 6833 terms. Intergenic: 0.684655 %AT, H2T: 222816 nt, 1178 terms; T2T: 73769 nt, 1078 terms; H2H: 62266 nt, 966 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|188995955|ref|NC_010730.1| Sulfurihydrogenibium sp. YO3AOP1, complete genome (length 1838442) SYO3AOP1_0001 129 - 1508 + | chromosomal replication initiator protein DnaA SYO3AOP1_0003 2017 - 2769 + | RNA methyltransferase, TrmH family, group 3 TERM 1 3454 - 3475 + G 75 -5.1 -5.03314 | gap 1, opp_overlap 3452, overlap 3453 ACATATAAACGTACC TGCCGACCCA TCT TCGG-CGGCA TTTTTTGCAGCTGCA SYO3AOP1_0004 2753 - 4048 + | 3-phosphoshikimate 1-carboxyvinyltransferase TERM 2 4226 - 4208 - T 78 -9.6 -3.22388 | overlap 4195 GAGGCAATTCATGAA TTGTCCGC ACA GCGAACAA ATGAGAGGTAAAAAG SYO3AOP1_0005 5213 - 4593 - | thiamine-phosphate pyrophosphorylase SYO3AOP1_0006 5366 - 6415 + | 2-alkenal reductase SYO3AOP1_0007 7376 - 6942 - | hypothetical protein TERM 3 7177 - 7197 + g 76 -9.8 -3.06261 | AAGGTAAGATATGCC CTCAACAG CTTTC CTGTTGAG TCTTGAAGCTTAGAA SYO3AOP1_0008 7662 - 7369 - | DNA polymerase beta domain protein region SYO3AOP1_0009 9047 - 7659 - | peptidase U62 modulator of DNA gyrase TERM 4 8789 - 8806 + g 70 -7.1 -3.73281 | CTTCTCCTTCTGCTT TTGCTAA GGAT TTAGCAA TTTCCATCATGTTTT SYO3AOP1_0010 9539 - 9060 - | hypothetical protein TERM 5 9875 - 9865 - g 74 -5.4 -4.89393 | overlap 9866 TAAACCTTATAAAAA CTTC TAC GAAG AAGAAGCATTAATAT SYO3AOP1_0011 9746 - 12604 + | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) TERM 6 12764 - 12780 + F 93 -6.5 -5.54079 | opp_overlap 12767, overlap 12767 TGTTATCCTGAGGAC GAAGTCC GAA GGACCTC TTTTTTGATTTTTCG SYO3AOP1_0012 13141 - 14127 + | transposase IS116/IS110/IS902 family protein SYO3AOP1_0013 15652 - 14225 - | flagellar hook-associated protein FlgK TERM 7 14568 - 14585 + g 74 -5.7 -4.72486 | opp_overlap 14568, overlap 14577 ACGCCGTTGATACTA TCTTTTA ATGC TAAAAGA TTTTTACCGTTTGTA SYO3AOP1_0014 15961 - 16839 + | ROK family protein SYO3AOP1_0015 17174 - 16827 - | 6-pyruvoyl tetrahydropterin synthase and hypothetical protein SYO3AOP1_0016 17711 - 17178 - | hypothetical protein SYO3AOP1_0017 18661 - 17708 - | magnesium and cobalt transport protein CorA SYO3AOP1_0018 19278 - 18670 - | chromosome segregation and condensation protein ScpA TERM 8 18761 - 18751 - G 74 -5.4 -4.74103 | GTCGTAATTTAAAAA TAGC AGT GCTA TAAATGCTTGAGTTT SYO3AOP1_0019 20233 - 19256 - | tetraacyldisaccharide 4'-kinase SYO3AOP1_0020 21203 - 20223 - | ribonuclease Z SYO3AOP1_0021 21869 - 21207 - | conserved hypothetical cytosolic protein TERM 9 21707 - 21719 + g 78 -2 -5.75822 | TGATATAAATTTTCT TTCT CTCTA AGAA TTTTTTTAATTTATC SYO3AOP1_0022 23100 - 21862 - | DNA methylase N-4/N-6 domain protein SYO3AOP1_0023 24064 - 23093 - | Inositol phosphatase/fructose-16-bisphosphatase SYO3AOP1_0024 24576 - 24052 - | hypothetical protein SYO3AOP1_0025 25995 - 24577 - | aldolase TERM 10 24692 - 24702 + g 74 -5.4 -4.77757 | TCTGTGTACTGCTTT GTGT CAA ACAC TTTTAATTTTTCAAA SYO3AOP1_0026 29567 - 28269 - | amidohydrolase SYO3AOP1_0027 31114 - 29567 - | protein of unknown function DUF1703 SYO3AOP1_0028 33377 - 31119 - | phosphoribosylformylglycinamidine synthase II SYO3AOP1_0029 33526 - 33996 + | NADH dehydrogenase (ubiquinone) 24 kDa subunit SYO3AOP1_0030 33980 - 35551 + | NADH dehydrogenase (quinone) SYO3AOP1_0031 35561 - 38563 + | formate dehydrogenase, alpha subunit SYO3AOP1_0032 40022 - 39141 - | dihydrodipicolinate synthase TERM 11 40194 - 40182 - g 71 -7.7 -3.39787 | overlap 40180 GGAAATGAGATAATA CTCCT TGA AGGAG ACCTTGGAGCTGGCA SYO3AOP1_0033 40095 - 40490 + | protein of unknown function UPF0079 TERM 12 41329 - 41308 - f 74 -2.3 -5.58051 | AAACAAAAAAGAAAA TCTAATGCA AATT TACAGTAGA ATTGGTCAGATTTTA TERM 13 43888 - 43872 - g 78 -9.5 -3.27525 | CGGTTGCAAAGGTAA GTCTTCT TGA AGAAGAC AGAAGTCATGAAATA SYO3AOP1_0036 42392 - 43990 + | DNA repair protein RecN SYO3AOP1_0037 43978 - 46740 + | excinuclease ABC, A subunit TERM 14 46890 - 46913 + T 100 -13.2 -3.61646 | opp_overlap 46893, overlap 46884 46893 CTAAAGTCCTCAGGA TAAGGCAGGG TTAA CCCTGCCTTG TTGATTTATACGATT TERM 15 46910 - 46893 - T 100 -12.7 -3.40899 | opp_overlap 46890 46884 46893 AAGTCCTCAGGATAA GGCAGGG TTAA CCCTGCC TTGTTGATTTATACG TERM 16 46893 - 46910 + T 100 -12.7 -3.93401 | opp_overlap 46893, overlap 46890 46884 AAGTCCTCAGGATAA GGCAGGG TTAA CCCTGCC TTGTTGATTTATACG SYO3AOP1_0038 48441 - 46927 - | Leucyl aminopeptidase TERM 17 47876 - 47895 + g 71 -8 -3.34357 | overlap 47875 ACGTTAGCCGGCTCA TTTACAAG GTCT CTTGTAAA GTTTTGTGCTTCTGC SYO3AOP1_0039 48851 - 49318 + | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen SYO3AOP1_0040 49334 - 49558 + | twin-arginine translocation protein, TatA/E family subunit TERM 18 50067 - 50054 - g 75 -2.5 -5.55664 | overlap 50066 TTAGCATTAAAAAAA TATTT ATCA AAATA CCATGAAATCATAGC TERM 19 50606 - 50628 + G 70 -6.4 -4.33739 | AAGATAAAGTCTAAT CCAAGATTTT TAG AAGATTTTGG TTTTAAAGTTTTTTA SYO3AOP1_0041 49565 - 51085 + | Peptidoglycan-binding domain 1 protein SYO3AOP1_0042 51078 - 51617 + | protein of unknown function DUF882 SYO3AOP1_0043 52001 - 51618 - | hypothetical protein SYO3AOP1_0044 53592 - 52465 - | Integrase catalytic region TERM 20 53206 - 53216 + g 75 -2.6 -5.63517 | opp_overlap 53206 GCAGAGTTTATCAAG TAAA ACC TTTA TTTTTTCTTTCCCAA TERM 21 53777 - 53794 + r 79 -8.5 -3.83169 | CTTATTCACTGTATG GGCAATT CATG AATTGCC TTTACTCACTTTCTC TERM 22 53973 - 53945 - R 86 -7.4 -4.89729 | opp_overlap 53963, overlap 53947 TATAAAATCTAAAAA TCCCCCCAAGGC TTTAG ACCTTGGAGGCA AGGTGTTGGAGGTTA TERM 23 53971 - 53947 - R 77 -10 -2.69699 | opp_overlap 53963, overlap 53945 TAAAATCTAAAAATC CCCCCAAGGC TTTAG ACCTTGGAGG CAAGGTGTTGGAGGT SYO3AOP1_0045 55074 - 54004 - | hypothetical protein SYO3AOP1_0046 56395 - 55106 - | ammonium transporter TERM 24 55510 - 55500 - G 78 -6.8 -4.51799 | opp_overlap 55500 ATTAAATCTACAAAA CCTG CTG CAGG TGTAATTGCTACAAG SYO3AOP1_0047 56758 - 56420 - | nitrogen regulatory protein P-II TERM 25 56955 - 56936 - H 74 -3 -5.48213 | TATGCAAAAGAAAAA TTAATTCT TGCT AAAATTAA CAATTATCAGATACT TERM 26 57080 - 57068 - g 84 -3.4 -5.8096 | TACAAAAAAGAAAAA CATC CATTT GATG TTGACCTTATAAATA SYO3AOP1_0048 57029 - 58472 + | hypothetical protein TERM 27 58489 - 58477 - f 82 -4.9 -5.35459 | overlap 58465 AGAGATTATAAAAAA TAATC ATG GATTA CTTGCCAATAGTCCT SYO3AOP1_0049 58482 - 59063 + | siroheme synthase SYO3AOP1_0050 60438 - 59092 - | hypothetical protein TERM 28 59991 - 60005 + g 70 -7.2 -3.64487 | opp_overlap 59976, overlap 59982 59976 TAAATCTTTGATCAT CAAGAT TTA ATCTTG TTCTTCCAAATATAA TERM 29 60402 - 60416 + g 74 -2.1 -5.61824 | overlap 60390 AGACTGCTAAAATTG CAGTT GATAA GACTG TTTTTTTGAGTTTTG SYO3AOP1_0051 61200 - 60463 - | uroporphyrin-III C-methyltransferase TERM 30 60819 - 60797 - G 78 -9.2 -3.53836 | overlap 60793 60791 GCAAAAGAAGATGAA GCTCCCCTAA ATG TTAGAGGAAC CCCTACAGAAGTTGG SYO3AOP1_0052 61978 - 61193 - | Uroporphyrinogen III synthase HEM4 TERM 31 61811 - 61830 + g 71 -2.9 -5.28983 | opp_overlap 61800 AAAATAAAAAACTTC TGGTTTT TTATCT AAAGCCA TTTTTATATTTTCAA TERM 32 61947 - 61963 + g 84 -3.7 -5.80951 | TCATCTGCCTTTCTT GTAGC ATATATA GCTAC TTTTTTATTTTCCAT SYO3AOP1_0053 63944 - 61968 - | molybdopterin oxidoreductase TERM 33 62734 - 62723 - G 71 -3 -5.24416 | opp_overlap 62723, overlap 62717 GAACTACAAGAAAAA CATT TTCT AATG CTTTGCGCACTTTAT TERM 34 62986 - 63014 + g 85 -8.3 -4.47456 | gap 1 CCGCCCATTGCGTTT GGTTGTCCTGTT AAAGAA AAC-GGACAACC TTTGTTATTCAATCT SYO3AOP1_0054 64714 - 63941 - | nitrate ABC transporter, ATPase subunits C and D SYO3AOP1_0055 65481 - 64711 - | nitrate ABC transporter, inner membrane subunit SYO3AOP1_0056 66701 - 65484 - | NO3-/NO2-ABC transporter SYO3AOP1_0057 66978 - 67901 + | general glycosylation pathway protein SYO3AOP1_0058 70356 - 68341 - | Organic solvent tolerance protein SYO3AOP1_0059 70409 - 71191 + | GTP-binding protein HSR1-related SYO3AOP1_0061 73436 - 72198 - | transposase mutator type TERM 35 74155 - 74138 - H 71 -8.5 -2.82742 | overlap 74135 ATTGTCGTATAATTA TGACTGA TAAA TCAGTCA AAGAGGATTTAAATG SYO3AOP1_0062 74168 - 75244 + | efflux transporter, RND family, MFP subunit SYO3AOP1_0063 75256 - 76482 + | outer membrane efflux protein SYO3AOP1_0064 76562 - 77419 + | RNA polymerase, sigma 32 subunit, RpoH SYO3AOP1_0065 77765 - 78298 + | molybdenum cofactor synthesis domain protein TERM 36 78754 - 78736 - T 100 -12.4 -4.77173 | opp_overlap 78732 78730 TGGTTATAAAATAAA GCACCGCC TAA AGCGGTGC CATATATATTAGTTA SYO3AOP1_0066 79118 - 78774 - | iron-sulfur cluster assembly accessory protein SYO3AOP1_0067 80015 - 79191 - | signal peptide peptidase SppA, 36K type SYO3AOP1_0068 81133 - 80027 - | glutamate 5-kinase TERM 37 80256 - 80266 + g 74 -5.4 -4.91109 | AGTAAACTCTTTCCT GCTT TTA AAGC TTTTTCTGCTCCAGC TERM 38 80391 - 80413 + g 74 -2.1 -5.63517 | CCTATTTTATTTCCG GATAAAATA TCAAC TATTATATC TTTTTTCTTTGGCGC SYO3AOP1_0069 81895 - 81134 - | tRNA (adenine-N(1)-)-methyltransferase TERM 39 81495 - 81505 + g 72 -2.6 -5.51353 | opp_overlap 81495 AGGTTGTTTAATGCA TTTT TTA AAAA TTTTTCTTCTTTTTC SYO3AOP1_0070 82548 - 81892 - | hypothetical protein TERM 40 83481 - 83455 - g 72 -6 -4.41548 | opp_overlap 83455 CTACATCGTAGAAAA TCTTGAAACTCC GTT AAAATTTCAAGA TGGATTTTATTTATC SYO3AOP1_0071 83189 - 83860 + | protein of unknown function DUF45 SYO3AOP1_0072 83938 - 84825 + | putative circadian clock protein, KaiC TERM 41 85400 - 85390 - g 71 -3.2 -5.1971 | overlap 85393 AGTAAAAATTAAAAA CTAC TCC GCAG AAGAAGTTTTAGATA SYO3AOP1_0073 84830 - 85492 + | hypothetical protein TERM 42 85584 - 85625 + F 83 -10.4 -3.2963 | opp_overlap 85580 85582 AAATTATAAATTAGG CACCTCCTATAGAAGA AAACTTTAAA TATTCTATAGGAGGTG TTATGAGAAACTCGT TERM 43 85810 - 85793 - f 72 -8.5 -3.07439 | overlap 85788 GAGAAAAAGAGTAGA GGCAATT CATG AATTGCC ATTACAATGAATAAG TERM 44 85855 - 85839 - f 95 -8.7 -5.04597 | AGTGAGAGATAAAAA GACGAAG ATT CTTCGCC GACTGTAGAATGGCA SYO3AOP1_0074 86473 - 86889 + | Nucleoside-diphosphate kinase SYO3AOP1_0075 86879 - 87391 + | hypothetical protein SYO3AOP1_0076 87415 - 87783 + | putative sensor with HAMP domain SYO3AOP1_0077 87789 - 88706 + | hypothetical protein SYO3AOP1_0078 88719 - 89078 + | Roadblock/LC7 family protein SYO3AOP1_0079 89106 - 89801 + | hypothetical protein SYO3AOP1_0080 89803 - 90336 + | small GTP-binding protein TERM 45 90733 - 90743 + T 73 -8.2 -3.39595 | opp_overlap 90727 TCCGGCAAAGGCCAA GCCC AAA GGGC TTCTACATGCTTAGC TERM 46 90816 - 90769 - T 70 -8.4 -3.14564 | TTAGCCTGTGATTAA GGTTTCGCCCTAAGCTCCTCCA CAGG CAGAGGAGCTTAAAGCTATCCC CGTTAGGTTTCGAGC SYO3AOP1_0081 91722 - 91291 - | UspA domain protein SYO3AOP1_0082 92743 - 91727 - | hypothetical protein TERM 47 92017 - 92029 + g 100 -7.7 -5.40072 | CTCTTAAATTTACTC CATGC GTA GCATG TTTTTTTGCAAAGAA SYO3AOP1_0083 93038 - 92760 - | cytochrome c oxidoreductase subunit B SYO3AOP1_0084 94294 - 93056 - | oxidoreductase molybdopterin binding TERM 48 94108 - 94123 + g 76 -3.3 -5.42259 | TTGGAGCTCTGAAGG CCTTT TTTATC AAAGG TTTTTTTCCGGGTAA SYO3AOP1_0085 95480 - 94536 - | thiamine-monophosphate kinase SYO3AOP1_0086 97029 - 95491 - | glycosyl transferase family 39 SYO3AOP1_0087 99074 - 97344 - | excinuclease ABC, C subunit SYO3AOP1_0088 100589 - 99351 - | transposase mutator type SYO3AOP1_0090 101850 - 101083 - | hydrolase, TatD family SYO3AOP1_0091 103732 - 101855 - | ATP-dependent metalloprotease FtsH TERM 49 102667 - 102684 + g 75 -8.4 -3.75465 | GGTTTGCAAGGTCTG CACCCG AAAATC CGGGTG TTCCTTTTGCTATTG TERM 50 103014 - 103024 + g 84 -5.4 -5.49809 | opp_overlap 103014 TCTATAAATATTAAA CATG GAG CATG TTTTTTTGCAGTTTC TERM 51 103194 - 103213 + g 70 -4.3 -4.87807 | overlap 103195 TAGAGTAATATTCCT TTTGGTG CTCTAC CACCAAG TTTTTGATATCTTGA TERM 52 103793 - 103775 - R 77 -8.2 -3.90291 | opp_overlap 103774 ACCTGGTCAACCAAA CTATGCAA ATC TTGCACAG CTTGGGTTGGGGTAT SYO3AOP1_0092 105412 - 103775 - | transposase SYO3AOP1_0093 106867 - 105494 - | tRNA(Ile)-lysidine synthetase TERM 53 105579 - 105565 - G 76 -8.6 -3.55622 | opp_overlap 105564 TTGAATTTTCTGAAA CTGGAT AAT ATCCAG ACCTTTTGTATCCAA SYO3AOP1_0094 107295 - 106981 - | ribosomal protein S20 SYO3AOP1_0095 107412 - 108614 + | Methionine adenosyltransferase SYO3AOP1_0096 110127 - 109219 - | ribonuclease BN TERM 54 110097 - 110081 - G 83 -8 -4.23007 | opp_overlap 110081 TACAGAATTTTAAAA GGGGTT TTTAC AACCCC TACCTTGTTATTAAC SYO3AOP1_0097 110401 - 110108 - | hypothetical protein SYO3AOP1_0098 110704 - 110414 - | metal dependent phosphohydrolase TERM 55 110587 - 110597 + g 70 -4 -5.08086 | CATTATCTTTTATTT TCTT TTC AAGA TTTTCTATTTTTTCT SYO3AOP1_0099 110931 - 110701 - | hypothetical protein SYO3AOP1_0100 111326 - 110943 - | OsmC family protein SYO3AOP1_0101 112008 - 111328 - | Deoxyribonuclease V SYO3AOP1_0103 114640 - 113516 - | rod shape-determining protein RodA SYO3AOP1_0104 116439 - 114640 - | penicillin-binding protein 2 SYO3AOP1_0105 116911 - 116426 - | hypothetical protein SYO3AOP1_0106 117693 - 116908 - | Rod shape-determining protein MreC TERM 56 116984 - 117000 + g 74 -6.6 -4.2328 | opp_overlap 116984 116983 ACTTCTCTAAAAAAC TCTCCT TCCTT AGGAGA TATTTTTCTTATAAT TERM 57 117339 - 117323 - G 93 -6.6 -5.5112 | TCTATGAAGAAAAAA TCAGAC CAGTT GTCTGA AGATATTCCTATAAC SYO3AOP1_0107 118743 - 117706 - | cell shape determining protein, MreB/Mrl family SYO3AOP1_0108 121049 - 119118 - | threonyl-tRNA synthetase SYO3AOP1_0109 121471 - 121046 - | hypothetical protein TERM 58 121434 - 121445 + g 81 -4.4 -5.4588 | opp_overlap 121434 AAATTGTTAAATAAT GCTA ACTT TAGC TTTTTTATGGTTTTA SYO3AOP1_0110 122285 - 121458 - | protein of unknown function DUF147 SYO3AOP1_0111 123348 - 122278 - | dihydropteroate synthase TERM 59 122434 - 122446 + g 79 -4.9 -5.30189 | CGGCAAAGTATCCGG TCTAT TTA ATAGA TTTTTTAATATTATA SYO3AOP1_0112 126230 - 123717 - | ATPase, P-type (transporting), HAD superfamily, subfamily IC TERM 60 124075 - 124063 - G 70 -4.1 -5.05606 | overlap 124059 TTGAACAAAAAGAAA TGAGA AAT TCCCA TTATCAGACCATTAT TERM 61 125981 - 125962 - G 70 -4.4 -4.83169 | overlap 125940 ATTTCTTGATAAAAA CCTATAAA TCCA TTTATAAG CAAAAGTCCATAAAC TERM 62 126435 - 126416 - R 100 -12.2 -6.28967 | CAGAAATAAAAAAAA TCCTTCGG ATAT CCGAAGGA ACATAGCTAAATTTA SYO3AOP1_0113 127582 - 126461 - | cytochrome c-type biogenesis protein CcsB SYO3AOP1_0114 128234 - 127602 - | Phosphoglycerate mutase SYO3AOP1_0115 128692 - 128237 - | GCN5-related N-acetyltransferase SYO3AOP1_0116 131069 - 128667 - | ATP-dependent protease La TERM 63 128932 - 128944 + g 71 -7.7 -3.5511 | opp_overlap 128929, overlap 128930 GTCATTGCAACATCC GACCT TAC AGGTC TGTTTGTAAATACAG TERM 64 130252 - 130265 + g 79 -8.1 -4.13421 | TCTTCCTTTATTTCG TCCGG CATT CCGGA TTCTTCTATTTTCTT TERM 65 130722 - 130733 + g 87 -4.4 -5.73672 | AACTCCCACCTGATA GTAG TCAT CTAC TTTTTTTAATTCTTT SYO3AOP1_0117 131424 - 131089 - | heat shock protein Hsp20 SYO3AOP1_0118 132181 - 131417 - | tRNA (guanine-N1)-methyltransferase TERM 66 132497 - 132513 + H 76 -6.5 -4.62471 | TCGCCACTGCAGGTA GTGGGCT CTT ACCCCAC TTTTTCACCCTTGCC SYO3AOP1_0119 132781 - 133617 + | Linocin_M18 bacteriocin protein SYO3AOP1_0120 133639 - 134097 + | outer membrane chaperone Skp (OmpH) TERM 67 134118 - 134139 + F 70 -8 -3.05539 | overlap 134117 TTCCGAAATTTGTAT GGGTAGAC CATCGT GTCTGCCC CTTATTTCATTAATC SYO3AOP1_0121 134577 - 134762 + | hypothetical protein SYO3AOP1_0122 136101 - 134752 - | Na+/solute symporter TERM 68 135430 - 135443 + g 70 -3.9 -5.04597 | AATCCATGCAACTAT GTATA GAAT TATAC TTTTTATGTCTAACT TERM 69 135598 - 135580 - G 83 -8.2 -4.15788 | AATTGTTTGAATAAA GTCTGTTA AAG CAACAGAC CACATACCACCAAAA SYO3AOP1_0123 137477 - 136098 - | argininosuccinate lyase TERM 70 137347 - 137359 + g 74 -7.7 -3.79764 | overlap 137358 TTTCCAAGCATCTTT GCATG GGC CATGC TTCCTTTTATATCAT SYO3AOP1_0124 137532 - 139010 + | diguanylate cyclase SYO3AOP1_0125 140199 - 138997 - | competence/damage-inducible protein CinA TERM 71 140104 - 140116 + g 79 -4.9 -5.22312 | TTGAACGTCGACACC TCTTT CAA AAAGA TTTTTTGCTATAAAT SYO3AOP1_0126 140623 - 140204 - | hypothetical protein TERM 72 140736 - 140725 - R 74 -3 -5.36314 | TAAAATATTAAAAAA GTTA TTCA TAAC GATAGAGTAAACAAA TERM 73 141059 - 141044 - R 100 -11.8 -5.48213 | GATTTAAAATAAAAA GGGGGC TTTT GCCCCC TTGAAGAGATTATTG SYO3AOP1_0127 141314 - 141069 - | hypothetical protein TERM 74 141352 - 141368 + r 73 -7.9 -3.6579 | overlap 141361 141361 141362 141364 TAATAAAATTATTTT CCTGCTG GTG CAGCTGG TTGTTCAGCTGGCTT SYO3AOP1_0128 141599 - 141345 - | hypothetical protein SYO3AOP1_0129 143070 - 141673 - | integral membrane sensor signal transduction histidine kinase SYO3AOP1_0130 143725 - 143051 - | two component transcriptional regulator, winged helix family SYO3AOP1_0131 144947 - 143835 - | major facilitator superfamily MFS_1 SYO3AOP1_0132 146425 - 145187 - | transposase mutator type SYO3AOP1_0133 148553 - 146418 - | ATPase, P-type (transporting), HAD superfamily, subfamily IC TERM 75 147632 - 147643 + g 71 -3 -5.3104 | CAAACGGTATTATTT TTTC TATT GAAA TTTTATTTTTCGTGA TERM 76 148250 - 148275 + g 76 -5.4 -5.03145 | overlap 148246 ACGTACTATCTCTAA GCACCTTGGC TTTTAT GCTAAGATGC TTTTTTAACAGATTC SYO3AOP1_0134 149082 - 148582 - | hypothetical protein SYO3AOP1_0135 149383 - 150945 + | protein of unknown function DUF87 SYO3AOP1_0136 150947 - 151603 + | phosphoribosyltransferase SYO3AOP1_0137 151844 - 152437 + | hypothetical protein TERM 77 152472 - 152440 - T 89 -8.5 -4.64464 | opp_overlap 152448 152465 152466, overlap 152448 TAAATTAAAGTAAAA TAAATAAAGGGGGCT TTA ACCCCCCTTTTTTCA AAAATTTATATCACT TERM 78 152448 - 152464 + T 89 -7.9 -5.03747 | opp_overlap 152440 152448 AGTAAAATAAATAAA GGGGGCT TTA ACCCCCC TTTTTTCAAAAATTT TERM 79 152463 - 152448 - T 90 -8.2 -4.88786 | opp_overlap 152448, overlap 152440 AGTAAAATAAATAAA GGGGGC TTTA ACCCCC CTTTTTTCAAAAATT SYO3AOP1_0138 152707 - 152483 - | hypothetical protein SYO3AOP1_0139 152921 - 154771 + | oxaloacetate decarboxylase alpha subunit SYO3AOP1_0140 154775 - 155941 + | lipid-A-disaccharide synthase SYO3AOP1_0141 157124 - 155907 - | integral membrane sensor signal transduction histidine kinase TERM 80 156254 - 156267 + g 71 -3.1 -5.1523 | TACTTTCTTTTAAGT CAATG ATAA CGTTG TTTTTATCTTCTGAA SYO3AOP1_0142 157788 - 157114 - | two component transcriptional regulator, winged helix family TERM 81 157843 - 157818 - R 95 -5.3 -5.98675 | overlap 157819 TATAAAAATAAAAAA GGGGGAGGTCA TTGA CGACCTTCCCA AATAATGGAGGGGAG TERM 82 157842 - 157819 - R 87 -8.8 -4.15545 | overlap 157818 ATAAAAATAAAAAAG GGGGAGGTCA TTGA CGACCTTCCC AAATAATGGAGGGGA SYO3AOP1_0143 158349 - 157894 - | hypothetical protein TERM 83 160073 - 160056 - R 71 -8.5 -2.85446 | GAGAAAGTGAGTAGA GGCAATT CATG AATTGCC CATACGGTGAATAAG SYO3AOP1_0145 162597 - 160159 - | AMP-dependent synthetase and ligase SYO3AOP1_0146 162658 - 165288 + | alanyl-tRNA synthetase SYO3AOP1_0147 165300 - 165605 + | preprotein translocase, YajC subunit SYO3AOP1_0148 165611 - 166519 + | restriction endonuclease TERM 84 167215 - 167233 + G 70 -3.8 -5.09245 | AAGAAGGTTTTTGAA CACTATCA AGA TGGTTGTG TTTTTATCATTTTAG SYO3AOP1_0149 166630 - 167526 + | hypothetical protein TERM 85 168689 - 168671 - g 100 -11.8 -4.24002 | GGTTAAACTTGAAAA TGGAGAAG CTA CTTCTCCA ATCCTAAAATTCTTC SYO3AOP1_0150 167568 - 169376 + | aspartyl-tRNA synthetase SYO3AOP1_0151 169373 - 169744 + | Rhodanese domain protein TERM 86 169888 - 169861 - gf 79 -4.9 -5.15117 | gap 1, overlap 169867 CAAAATTTGAAAAAA CCGAAAGCTTCT TTTGT AGAAGCTG-CGG AAAGTCTGGAGAAAA TERM 87 169883 - 169867 - gf 71 -6.6 -4.05875 | overlap 169861 TTGAAAAAACCGAAA GCTTCT TTTGT AGAAGC TGCGGAAAGTCTGGA SYO3AOP1_0152 169707 - 170423 + | amidophosphoribosyltransferase-like protein TERM 88 170713 - 170728 + G 82 -4.8 -5.42164 | GTAAACAGTTTAATT TTAATG ATAA CATTAA TTTTTATTATTTATG SYO3AOP1_0153 170425 - 171348 + | cation diffusion facilitator family transporter TERM 89 171352 - 171371 + T 73 -7.8 -3.71883 | opp_overlap 171354, overlap 171354 ATATTTCATTAAGAA AAGGGCGA TAAA TCGCCCTG TTTAAGATTATATTA TERM 90 171369 - 171354 - T 95 -10.4 -4.71828 | opp_overlap 171354 171352 ATTTCATTAAGAAAA GGGCGA TAAA TCGCCC TGTTTAAGATTATAT TERM 91 171354 - 171369 + T 85 -10.4 -3.43081 | opp_overlap 171354, overlap 171352 ATTTCATTAAGAAAA GGGCGA TAAA TCGCCC TGTTTAAGATTATAT SYO3AOP1_0154 172463 - 171384 - | protein of unknown function DUF43 SYO3AOP1_0155 173309 - 172479 - | spermidine synthase SYO3AOP1_0156 174711 - 173434 - | peptidase M16 domain protein TERM 92 174272 - 174284 + g 77 -4.1 -5.4505 | TTTGCCTTTATTTGT GCGAT TAT ATTGC TTTTTTCTTGAGAAA TERM 93 175127 - 175111 - R 100 -5.8 -6.17033 | opp_overlap 175111 AAAAAAAATAAAAAA GAGGCC ATAAA AGCCTC TTCATAAAAAGAATT SYO3AOP1_0157 175388 - 175164 - | hypothetical protein SYO3AOP1_0158 175679 - 175392 - | hypothetical protein TERM 94 175703 - 175723 + r 71 -8.3 -3.36965 | CTCGCATTTGCTAAG TGGAGGG GCATTAA CCCTCCA TTGCTAATTATTTTA SYO3AOP1_0159 176405 - 175731 - | cytochrome C oxidase mono-heme subunit/FixO SYO3AOP1_0160 177829 - 176420 - | Cytochrome-c oxidase SYO3AOP1_0161 178612 - 177848 - | cytochrome c class I SYO3AOP1_0162 179040 - 178720 - | Antibiotic biosynthesis monooxygenase SYO3AOP1_0163 179980 - 179045 - | dihydroorotate dehydrogenase family protein SYO3AOP1_0164 180040 - 181020 + | NAD-dependent epimerase/dehydratase SYO3AOP1_0165 182739 - 181447 - | UDP-N-acetylglucosamine 1-carboxyvinyltransferase TERM 95 182823 - 182840 + r 71 -8.5 -2.85847 | opp_overlap 182820 AATTTTTACTAAGTG GGCAATT CATG AATTGCC TCTACTCACTTTCTT SYO3AOP1_0166 183820 - 182945 - | protein-(glutamine-N5) methyltransferase, release factor-specific TERM 96 183010 - 183023 + g 70 -3.9 -5.00642 | TTCCAGCCAAATCTT TATAG ATTT CTATA TTTTTATATCCGTTA TERM 97 183580 - 183593 + g 80 -5.3 -5.26918 | TGTAAAAATCAAGTC CAAAG AATT CTTTG TTTTTTGTAAGGTAT SYO3AOP1_0167 184437 - 183817 - | protein of unknown function UPF0126 SYO3AOP1_0168 185126 - 184407 - | sugar fermentation stimulation protein TERM 98 184971 - 184984 + gr 71 -5.3 -4.68655 | GACTAAAATCTCTCT TCCTT TTGT AAGGA TTTCTTTTAGCCTTC SYO3AOP1_0169 186087 - 185113 - | Holliday junction DNA helicase RuvB TERM 99 186425 - 186413 - g 85 -4.9 -5.58454 | CTGAGATTAAAAAAA TGAAA GAG TTTCA AGATTTTTATCTTGT SYO3AOP1_0170 186118 - 186513 + | protein of unknown function DUF55 TERM 100 186754 - 186737 - f 71 -8.5 -2.85446 | GAGAAAGTGAGTAGA GGCAATT CATG AATTGCC CATACGGTGAATATG TERM 101 187309 - 187295 - g 72 -2.8 -5.33131 | opp_overlap 187295 GAAGAAAAAAATAAA TTTGGC AAG GCAAAA ATTATAACCGTTGAT SYO3AOP1_0171 186950 - 187810 + | Diaminopimelate epimerase SYO3AOP1_0172 187807 - 188355 + | 2'-5' RNA ligase TERM 102 190033 - 190014 - g 77 -3 -5.53991 | gap 1, overlap 190016 GATGTAGCAAAAAAA TG-TTTAGA TAT TCTAAAACA AGAGAAAGCAGGAAG SYO3AOP1_0173 188340 - 191858 + | chromosome segregation protein SMC SYO3AOP1_0174 192135 - 191893 - | hypothetical protein SYO3AOP1_0175 192216 - 193172 + | pseudouridine synthase, RluA family TERM 103 193896 - 193886 - g 80 -5.4 -5.13354 | opp_overlap 193886, overlap 193882 193895 TTTATAAAAAATAAA GCTT TAA AAGC CTTTTATAAAGGAGA TERM 104 194238 - 194221 - g 79 -3.5 -5.61277 | CATAAAAAAAGAAAA TACTTGT CCTA ACAAATA TGGAGAGATATCAGA SYO3AOP1_0176 193169 - 194839 + | Lytic transglycosylase catalytic SYO3AOP1_0177 194846 - 195478 + | riboflavin synthase, alpha subunit SYO3AOP1_0178 196211 - 195480 - | ABC transporter related SYO3AOP1_0179 197208 - 196213 - | DNA polymerase III, delta subunit TERM 105 197026 - 197012 - G 72 -5.8 -4.39277 | opp_overlap 197012 GAAGATGAGAATAAA TCTTTT GAA AAAAGA TGATTTCTAAAAGAT SYO3AOP1_0180 197731 - 197201 - | hypothetical protein SYO3AOP1_0181 198231 - 197728 - | pantetheine-phosphate adenylyltransferase SYO3AOP1_0182 198701 - 198228 - | Protein of unknown function methylase putative SYO3AOP1_0183 198963 - 199427 + | Redoxin domain protein TERM 106 199973 - 199957 - g 81 -2.9 -5.72053 | opp_overlap 199963 GAAGTAAAGAAAAAA CCACCTG GAC CAATTGG GGCCTTCTTGGTAGG SYO3AOP1_0184 199441 - 200286 + | cytochrome c biogenesis protein transmembrane region TERM 107 200466 - 200449 - T 71 -8.5 -2.85446 | overlap 200462 GAGAAAGTGAGTAGA GGCAATT CATG AATTGCC CATACAGTGAATAAG SYO3AOP1_0185 201383 - 200670 - | Uroporphyrinogen III synthase HEM4 TERM 108 201238 - 201258 + g 70 -4.1 -5.04601 | opp_overlap 201237 201230, overlap 201230 GTAAAGATTAAATAT TTATAATCT TCA AGATTAAAA TTTTTAATTTCTACC SYO3AOP1_0186 202921 - 201380 - | Ion transport protein SYO3AOP1_0187 203858 - 203079 - | short-chain dehydrogenase/reductase SDR SYO3AOP1_0188 204881 - 203871 - | anthranilate phosphoribosyltransferase SYO3AOP1_0189 205467 - 204874 - | Ribonuclease H TERM 109 205285 - 205295 + g 76 -5.4 -4.96501 | opp_overlap 205285 ATGAATTTTTTCAAA GAGA TAC TCTC TTTCTTTTTCTGAAA TERM 110 205377 - 205397 + g 71 -8.2 -3.2981 | opp_overlap 205377 CTGATGCAATAACAA GAGGACCG GCTAA CGGTCCCC TTCCTGCTTCATCTA TERM 111 205397 - 205377 - G 91 -10.4 -3.97307 | opp_overlap 205377 CTGATGCAATAACAA GAGGACCG GCTAA CGGTCCCC TTCCTGCTTCATCTA SYO3AOP1_0190 205861 - 205460 - | ribosomal protein L19 SYO3AOP1_0191 208263 - 206197 - | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) TERM 112 208645 - 208635 - g 74 -5.4 -4.89393 | overlap 208636 TAAACCTTATAAAAA CTTC TAC GAAG AAGAAGCATTAATAT SYO3AOP1_0192 208516 - 209139 + | hypothetical protein SYO3AOP1_0193 210076 - 209288 - | membrane protein-like protein SYO3AOP1_0194 213213 - 210418 - | preprotein translocase, SecA subunit TERM 113 211971 - 211981 + g 71 -5.4 -4.56093 | GGAACGTAATAGATG CCAA GGT TTGG TTTTCTGCTTGGATT TERM 114 213174 - 213188 + g 76 -3.6 -5.47821 | overlap 213176 TGATCTCTCTTTCGT TTTTTG TTC CAAAGA TTTTTTTAACTAAAT SYO3AOP1_0195 214013 - 213522 - | lipoprotein signal peptidase SYO3AOP1_0196 214452 - 214018 - | transcriptional regulator, TraR/DksA family TERM 115 214105 - 214124 + g 72 -5.8 -4.45765 | CTCTTCTTCGTTCTT TTGTTGGA AAGC TCTAACAA TTTCTTCATTTTGGC SYO3AOP1_0197 215567 - 214506 - | type IV pilus assembly PilZ TERM 116 215320 - 215307 - G 83 -6.7 -4.81249 | opp_overlap 215307 215305 CTCTAAAGCTAAAAA TGGGT CTCT ACCCA TCTTTTTAGAATAAT SYO3AOP1_0198 215737 - 216711 + | alanine racemase TERM 117 216756 - 216740 - g 74 -2.3 -5.56568 | overlap 216743 AGATGATGAAAAAAA TATTCAA AGT TTGATTA AAGATATTCTCAGCG SYO3AOP1_0199 216705 - 218060 + | two component, sigma54 specific, transcriptional regulator, Fis family SYO3AOP1_0200 218063 - 218248 + | 4-oxalocrotonate tautomerase family enzyme SYO3AOP1_0201 219010 - 218408 - | glutamine amidotransferase of anthranilate synthase TERM 118 218854 - 218825 - G 74 -8.6 -3.1984 | gap 1, opp_overlap 218828, overlap 218821 218818 218817 TATAACATCAACAGA GATCCCCGC-CTC TGTTG GAGTGCAGGGACC GGGTGATATTACAAT SYO3AOP1_0202 220005 - 219007 - | glyceraldehyde-3-phosphate dehydrogenase, type I TERM 119 220011 - 220022 + r 73 -4.4 -5.04385 | opp_overlap 220011, overlap 220015 CTACTCTCATAAATA TTCC TCCT GGAA TTTTTTCAGAATCTA SYO3AOP1_0203 221345 - 220035 - | UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate/D-alanyl-D-alanyl ligase SYO3AOP1_0204 221956 - 221345 - | Methyltransferase type 12 SYO3AOP1_0205 222868 - 221960 - | AAA ATPase SYO3AOP1_0206 223408 - 222869 - | lipopolysaccharide transport periplasmic protein LptA SYO3AOP1_0207 223928 - 223401 - | protein of unknown function DUF1239 SYO3AOP1_0208 225234 - 223909 - | glutamyl-tRNA reductase TERM 120 224273 - 224283 + g 74 -6.8 -4.22352 | TCGATTATAAATTCG GCTC TTT GAGC TTCTATTTTTCTTTC SYO3AOP1_0209 225299 - 225934 + | O-methyltransferase family 3 TERM 121 226241 - 226267 + T 100 -11.6 -5.45652 | opp_overlap 226239, overlap 226242 CTCCTGCAAGAATTT TGGAAGTTGGCC ACC GGCTAACTTCCC TTTTTTATTAAAGAT TERM 122 226242 - 226266 + T 100 -15.1 -3.86307 | opp_overlap 226239, overlap 226241 TCCTGCAAGAATTTT GGAAGTTGGCC ACC GGCTAACTTCC CTTTTTTATTAAAGA TERM 123 226383 - 226357 - T 73 -7.5 -3.65722 | overlap 226346 AAAATAATTCGTAAA TTACCTATCAA ATGGA TTAATAGGTAA AGTCTATGTTTTTAT TERM 124 226629 - 226650 + T 76 -8.7 -3.55582 | opp_overlap 226628 226629, overlap 226630 TTAAATTTATGAAAG TGGCAAGCT CTAA GGCTTGCCG TTGTGTGAGTGTTAT TERM 125 226630 - 226649 + T 77 -10 -2.72626 | opp_overlap 226629 226628, overlap 226629 TAAATTTATGAAAGT GGCAAGCT CTAA GGCTTGCC GTTGTGTGAGTGTTA SYO3AOP1_0210 226889 - 226662 - | hypothetical protein SYO3AOP1_0211 228168 - 226912 - | adenosylhomocysteinase SYO3AOP1_0212 229403 - 228660 - | methyltransferase small TERM 126 229064 - 229074 + g 70 -4 -5.12617 | AATCAAAATACTGAT GATT ATA AATC TTTTTTACATCCTTA SYO3AOP1_0213 231226 - 229400 - | GTP-binding protein TypA TERM 127 229704 - 229717 + g 79 -6.7 -4.54449 | CCAAAAATTGCGTAT GGTGT TGCT ACACC TTTTCTATCAGCTAT TERM 128 230827 - 230848 + g 71 -5.2 -4.63218 | TTATAACAACGATAG GTGTTAGA TTAGAT TCTAACGC TTTTCTTAAAACAAA SYO3AOP1_0214 231704 - 232633 + | magnesium chelatase ChlI subunit TERM 129 233309 - 233293 - g 78 -5.9 -4.90079 | ATTGCAATAATAAAA CTCTTTC ATT GAAAAAG CATGTTCCTGAAAGT SYO3AOP1_0215 232722 - 234173 + | hypothetical protein SYO3AOP1_0216 235607 - 234276 - | hypothetical protein SYO3AOP1_0217 237050 - 235749 - | hypothetical protein TERM 130 236076 - 236061 - G 80 -6.2 -4.90471 | opp_overlap 236061 ATTTAAAATATAAAA GGATAA ATTA TTATCC TTTACAAACTTATCA SYO3AOP1_0218 238356 - 237091 - | transposase IS605 OrfB TERM 131 237401 - 237423 + g 77 -7.7 -4.15006 | TCTACAGGAATAGTC GCAAGTCTG TCTTT CAGTCTTGC TTTTAGCATCCCTAT SYO3AOP1_0219 239330 - 238353 - | TniB family protein SYO3AOP1_0220 241201 - 239345 - | Integrase catalytic region SYO3AOP1_0221 241850 - 241218 - | TnsA endonuclease SYO3AOP1_0222 241988 - 242713 + | magnesium chelatase ChlI subunit SYO3AOP1_0223 243348 - 242782 - | D,D-heptose 1,7-bisphosphate phosphatase SYO3AOP1_0224 243711 - 243349 - | hypothetical protein SYO3AOP1_0225 243946 - 243704 - | molybdopterin converting factor, subunit 1 SYO3AOP1_0226 244601 - 243936 - | 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine 1-reductase SYO3AOP1_0227 245237 - 244611 - | CDP-alcohol phosphatidyltransferase SYO3AOP1_0228 246256 - 245258 - | ketol-acid reductoisomerase TERM 132 245408 - 245427 + g 79 -3.6 -5.60993 | overlap 245410 CTTAGCAAATTCGCC TTCTTGAA TTTC TTCAAGTA TTTTTTTATAAAGAG TERM 133 245410 - 245425 + g 74 -6.2 -4.45201 | overlap 245408 TAGCAAATTCGCCTT CTTGAA TTTC TTCAAG TATTTTTTTATAAAG SYO3AOP1_0229 247084 - 246479 - | hypothetical protein SYO3AOP1_0230 247648 - 247085 - | acetolactate synthase, small subunit SYO3AOP1_0231 249400 - 247652 - | acetolactate synthase, large subunit, biosynthetic type SYO3AOP1_0232 250751 - 249492 - | RNA methyltransferase, TrmA family SYO3AOP1_0233 251818 - 250748 - | hypothetical protein SYO3AOP1_0234 252590 - 251808 - | 2-dehydro-3-deoxyphosphooctonate aldolase SYO3AOP1_0235 252940 - 253164 + | hypothetical protein SYO3AOP1_0236 253161 - 254171 + | S-adenosylmethionine/tRNA-ribosyltransferase-isomerase SYO3AOP1_0237 254227 - 255510 + | diguanylate cyclase SYO3AOP1_0238 255485 - 256312 + | 4-diphosphocytidyl-2C-methyl-D-erythritol kinase SYO3AOP1_0239 256422 - 257357 + | ribose-phosphate pyrophosphokinase SYO3AOP1_0240 257729 - 258688 + | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding TERM 134 260668 - 260624 - g 74 -7.5 -3.76837 | opp_overlap 260635, overlap 260629 GACATAATCTAACAA TTAAATCTCAATCAAAATC CTACTTT GATTTTGATTCAGATATAA GAGTAGGAATGCTTG TERM 135 260663 - 260629 - g 74 -7.4 -4.09292 | opp_overlap 260635, overlap 260624 AATCTAACAATTAAA TCTCAATCAAAATC CTACTTT GATTTTGATTCAGA TATAAGAGTAGGAAT SYO3AOP1_0241 258682 - 260802 + | UvrD/REP helicase TERM 136 260782 - 260808 + F 75 -8.3 -3.68569 | AAGACTATTAGCGTA GATTTTTTAAA GAGTG TTTAAAAAATC TTATTCGCTGACTCC SYO3AOP1_0242 260924 - 261310 + | hypothetical protein SYO3AOP1_0243 261668 - 263344 + | Carbamoyl-phosphate synthase L chain ATP-binding SYO3AOP1_0244 263365 - 265188 + | leucyl-tRNA synthetase SYO3AOP1_0245 266180 - 265488 - | 2,3-diketo-5-methylthio-1-phosphopentane phosphatase SYO3AOP1_0246 266244 - 266693 + | ribonuclease H SYO3AOP1_0247 266680 - 268026 + | DNA repair protein RadA TERM 137 268069 - 268085 + F 79 -6.7 -4.66746 | opp_overlap 268079, overlap 268066 268079 AAAATATTTTTATAT TGTTTTA TAA TAAAACA TTGTTTTATTTTATC TERM 138 268079 - 268093 + F 72 -5.8 -4.36914 | opp_overlap 268079, overlap 268069 268066 TATATTGTTTTATAA TAAAAC ATT GTTTTA TTTTATCAGGAGGAG TERM 139 268936 - 268948 + G 77 -9.1 -3.29829 | opp_overlap 268928 268947, overlap 268947 CAAAAGATGGAGCTT GGTCC AAG GGACC TTGTGGCAAGGTCTA SYO3AOP1_0248 268114 - 269820 + | succinate dehydrogenase or fumarate reductase, flavoprotein subunit TERM 140 269835 - 269854 + F 73 -7.8 -3.69068 | opp_overlap 269835, overlap 269834 ATATAAATCAAATAG GGTGGGCT TCAT GGCTCACC TCTTTATTAAAGTGA TERM 141 270038 - 270024 - f 80 -5.8 -5.00616 | opp_overlap 270024 GTGTGTTCCAAAAAA TTCTAA AGT TTAGAA TTGCATAGATTACGC SYO3AOP1_0249 270335 - 270742 + | hypothetical protein SYO3AOP1_0250 271481 - 270786 - | molybdate ABC transporter, inner membrane subunit SYO3AOP1_0251 271880 - 271485 - | hypothetical protein TERM 142 271568 - 271585 + g 76 -7.1 -4.2408 | CATATTTATCAGCTT GTTTAGT TAAA ACTAAAC TTTCTAATTTTATAC SYO3AOP1_0252 272656 - 271877 - | molybdenum ABC transporter, periplasmic molybdate-binding protein SYO3AOP1_0253 272796 - 273290 + | Lytic transglycosylase catalytic SYO3AOP1_0254 273732 - 273274 - | protein of unknown function UPF0054 TERM 143 273475 - 273456 - GT 90 -12.2 -3.33696 | CTTTTGCGTAAGGAA GGGAGATG ATAA CATCTCCC AAAAGTCTATATTTA SYO3AOP1_0255 274693 - 273707 - | PhoH family protein TERM 144 274341 - 274352 + g 78 -5.8 -4.77173 | TGAGTTGGGGTTTTA GCCA TTAT TGGC TTTCTTTTATGAGAA SYO3AOP1_0256 275241 - 275918 + | hypothetical protein TERM 145 275952 - 275929 - T 85 -8.2 -4.43213 | GGTAATACATCAAAA GGAGGTAG TTACTCTC CTACCTCC ACCTCTTTTTCTCTA SYO3AOP1_0257 276158 - 275937 - | protein of unknown function DUF167 SYO3AOP1_0258 277264 - 276155 - | Myo-inositol-1-phosphate synthase SYO3AOP1_0259 278866 - 277277 - | D-3-phosphoglycerate dehydrogenase SYO3AOP1_0260 279272 - 280195 + | conserved hypothetical radical SAM protein SYO3AOP1_0261 280783 - 280484 - | protein of unknown function YGGT SYO3AOP1_0262 281149 - 280784 - | ribosomal protein L17 SYO3AOP1_0263 282142 - 281168 - | DNA-directed RNA polymerase, alpha subunit TERM 146 281649 - 281665 + g 75 -8.1 -3.61089 | opp_overlap 281649 TCTATAATTATCCAA CCTATTT CTG AAATAGG TTCTAATTCTTCGAC TERM 147 281665 - 281649 - G 70 -8.1 -3.14963 | opp_overlap 281649 TCTATAATTATCCAA CCTATTT CTG AAATAGG TTCTAATTCTTCGAC TERM 148 282171 - 282160 - R 72 -7.2 -3.84712 | opp_overlap 282168 TAACTCCATATTAAA CCGG TGTA CCGG TACCGGGCTATTTAT SYO3AOP1_0264 282852 - 282238 - | ribosomal protein S4 SYO3AOP1_0265 283245 - 282856 - | ribosomal protein S11 SYO3AOP1_0266 283619 - 283269 - | ribosomal protein S13 SYO3AOP1_0267 283748 - 283635 - | ribosomal protein L36 SYO3AOP1_0268 284001 - 283765 - | translation initiation factor IF-1 SYO3AOP1_0269 284766 - 284017 - | methionine aminopeptidase, type I TERM 149 284169 - 284153 - G 74 -8.7 -3.33696 | CCTTTGCCTAAGTAA GCCATCG GTT CAATGGC TAAAACCATTCCCGG SYO3AOP1_0270 285414 - 284779 - | Nucleoside-triphosphate--adenylate kinase SYO3AOP1_0271 286710 - 285418 - | preprotein translocase, SecY subunit SYO3AOP1_0272 287165 - 286707 - | ribosomal protein L15 SYO3AOP1_0273 287344 - 287165 - | ribosomal protein L30 TERM 150 287360 - 287382 + r 74 -2 -5.55001 | overlap 287361 CTTACAGGCACTCCT CCTGCATATA TTC TATATACAGA TTTTATTTTTTCTTC SYO3AOP1_0274 287925 - 287341 - | ribosomal protein S5 SYO3AOP1_0275 288308 - 287937 - | ribosomal protein L18 SYO3AOP1_0276 288870 - 288325 - | ribosomal protein L6 SYO3AOP1_0277 289300 - 288890 - | ribosomal protein S8 SYO3AOP1_0278 289501 - 289313 - | ribosomal protein S14 SYO3AOP1_0279 290082 - 289519 - | ribosomal protein L5 SYO3AOP1_0280 290445 - 290086 - | ribosomal protein L24 SYO3AOP1_0281 290816 - 290448 - | ribosomal protein L14 SYO3AOP1_0282 291162 - 290890 - | ribosomal protein S17 SYO3AOP1_0283 291376 - 291173 - | ribosomal protein L29 SYO3AOP1_0284 291804 - 291388 - | ribosomal protein L16 SYO3AOP1_0285 292513 - 291830 - | ribosomal protein S3 SYO3AOP1_0286 292863 - 292513 - | ribosomal protein L22 SYO3AOP1_0287 293176 - 292877 - | ribosomal protein S19 SYO3AOP1_0288 294003 - 293179 - | ribosomal protein L2 SYO3AOP1_0289 294308 - 294015 - | Ribosomal protein L25/L23 TERM 151 294125 - 294099 - G 72 -8.9 -2.64616 | gap 1, opp_overlap 294100 294105, overlap 294105 CTTGTATCCAGAGGA CCTAAAGCCAAA TCTT TTTGGCTTT-GG TTTAACTATCAGAGT TERM 152 294100 - 294125 + g 93 -11.3 -3.7108 | opp_overlap 294099 294105, overlap 294105 TTGTATCCAGAGGAC CTAAAGCCAAA TCTT TTTGGCTTTGG TTTAACTATCAGAGT TERM 153 294120 - 294105 - G 73 -7.6 -3.70149 | opp_overlap 294100 294105, overlap 294099 TCCAGAGGACCTAAA GCCAAA TCTT TTTGGC TTTGGTTTAACTATC TERM 154 294105 - 294120 + g 77 -7.6 -4.09556 | opp_overlap 294105 294099, overlap 294100 TCCAGAGGACCTAAA GCCAAA TCTT TTTGGC TTTGGTTTAACTATC SYO3AOP1_0290 294931 - 294305 - | ribosomal protein L4/L1e SYO3AOP1_0291 295635 - 294955 - | ribosomal protein L3 SYO3AOP1_0292 295958 - 295650 - | ribosomal protein S10 SYO3AOP1_0293 297165 - 295975 - | translation elongation factor Tu TERM 155 296526 - 296538 + g 70 -6.3 -4.3207 | ATACGTCTTCTACTG CCATT AGG AATGG TTTGTCTGTTTCTCT SYO3AOP1_0294 299270 - 297189 - | translation elongation factor G TERM 156 297384 - 297397 + g 71 -6.7 -3.96842 | TCTTTTTTCCATTCC GAGGA TTCT TCCTC TTCTTCTGTTAAGGT TERM 157 298062 - 298072 + g 76 -5.4 -5.00616 | CGCAATAACCGGCTC TGGA AAT TCCA TTTTTTCAAGAACAA TERM 158 298797 - 298809 + g 74 -4.1 -5.17744 | overlap 298787 TTGGATAGGGACAGG GTTTG TTC CAAGC TTTTTCTTCATATCT SYO3AOP1_0295 299797 - 299318 - | ribosomal protein S7 SYO3AOP1_0296 300229 - 299822 - | ribosomal protein S12 TERM 159 300634 - 300602 - R 82 -8.5 -4.13654 | gap 1, opp_overlap 300602 300606 300632 CTTTTAAACTATAAA CTATCCGGACCCCC GATTCA AGGGATCCGG-TAG TTATACTATTTTACA SYO3AOP1_0297 305384 - 300645 - | DNA-directed RNA polymerase, beta' subunit TERM 160 302633 - 302644 + g 74 -5.8 -4.61633 | TTCTTGTAAGGTATC CTGC AACT GCAG TTTTTAAAGCTGTGT TERM 161 302867 - 302849 - G 71 -6.7 -4.08974 | opp_overlap 302849 ATGCCATCATATAAA CCGGATT GAAAT AACCCGG ATATTTTTTACCGTT TERM 162 305430 - 305414 - R 100 -9.4 -5.02074 | TTATTGTTTAAAAAA CCTCCC AAAAA GGGAGG TTAAAATCTATCCTA SYO3AOP1_0298 309909 - 305443 - | DNA-directed RNA polymerase, beta subunit TERM 163 305744 - 305760 + g 71 -7.9 -3.54475 | overlap 305746 CCACCAAACTGAGCT CTGCCAC CAA GTGGCTG TTGTGTGATAAGAGA TERM 164 305746 - 305758 + g 77 -9.1 -3.34902 | overlap 305744 ACCAAACTGAGCTCT GCCAC CAA GTGGC TGTTGTGTGATAAGA TERM 165 309946 - 309972 + r 76 -9.5 -3.1247 | opp_overlap 309946, overlap 309945 TTTAAAATAAATAAA GGTAGATTGCC ATAAA GACAATCTACC CTTTCTTAAACTTGT TERM 166 309972 - 309946 - R 100 -11.7 -4.8743 | opp_overlap 309946 309945 TTTAAAATAAATAAA GGTAGATTGCC ATAAA GACAATCTACC CTTTCTTAAACTTGT SYO3AOP1_0299 310412 - 310026 - | ribosomal protein L7/L12 SYO3AOP1_0300 310986 - 310441 - | ribosomal protein L10 TERM 167 310536 - 310572 + g 73 -8 -3.46824 | opp_overlap 310566 CAAGGTTTGTAATAG GTGCTTGTAGTACAGC CAATA GCTGAGCAACAAGTAC TTCCTTGCTTGGTAG TERM 168 311005 - 311021 + r 100 -9.5 -4.98255 | overlap 310997 TCTACTCCTTAAGCT GCTTTAG TTT CTAAAGC TTTTTGTAATTCAGC SYO3AOP1_0301 311726 - 310998 - | ribosomal protein L1 TERM 169 311065 - 311081 + g 71 -8.1 -3.23945 | overlap 311064 ACTGAAGGGCTCATC GTTGTTT TTA AAACAAC ATTTCTTATATACTG SYO3AOP1_0302 312169 - 311732 - | ribosomal protein L11 SYO3AOP1_0303 313032 - 312235 - | NusG antitermination factor TERM 170 312502 - 312518 + g 100 -7.3 -5.47821 | opp_overlap 312502 ACCTGCACTAACAAA CCCTATT AAA AATGGGG TTTTTTTAACTAAAT SYO3AOP1_0304 313226 - 313041 - | preprotein translocase, SecE subunit SYO3AOP1_0305 313480 - 313331 - | ribosomal protein L33 SYO3AOP1_0306 314687 - 313497 - | translation elongation factor Tu TERM 171 314048 - 314060 + g 70 -6.3 -4.3207 | ATACGTCTTCTACTG CCATT AGG AATGG TTTGTCTGTTTCTCT TERM 172 314774 - 314790 + H 82 -10.9 -2.62616 | overlap 314776 TTGAACCCGCGACCT CACCCTT ACC AAGGGTG TGCTCTGCCGACTGA TERM 173 314873 - 314824 - H 74 -5.3 -4.83169 | gap 1, opp_overlap 314828 314829 314832, overlap 314832 ACCTGGGCATAAAAA CATAA-TAAGACGTAAAAAGACTA CTA CAGCCTTTTTACGTCTTGGTTTTA TTGGAGAGCGGGAGA TERM 174 314828 - 314868 + H 90 -9.2 -4.63218 | opp_overlap 314824 314832, overlap 314829 314832 GGGCATAAAAACATA ATAAGACGTAAAAAGACT ACTAC AGCCTTTTTACGTCTTGG TTTTATTGGAGAGCG TERM 175 314829 - 314867 + H 100 -12.7 -3.3761 | opp_overlap 314824 314832, overlap 314828 314832 GGCATAAAAACATAA TAAGACGTAAAAAGACT ACTAC AGCCTTTTTACGTCTTG GTTTTATTGGAGAGC TERM 176 314832 - 314864 + H 100 -12.2 -3.82261 | opp_overlap 314824 314832, overlap 314829 314828 ATAAAAACATAATAA GACGTAAAAAGACT ACTAC AGCCTTTTTACGTC TTGGTTTTATTGGAG TERM 177 314864 - 314832 - H 100 -15.1 -4.15932 | opp_overlap 314832 314829 314828, overlap 314824 ATAAAAACATAATAA GACGTAAAAAGACTA CTA CAGCCTTTTTACGTC TTGGTTTTATTGGAG TERM 178 315099 - 315115 + H 74 -9.5 -2.62616 | opp_overlap 315093 TCGAACCCACGACCT GGTGATT ACA AATCACC TGCTCTGCCGACTGA SYO3AOP1_0307 315574 - 316371 + | protein of unknown function DUF52 SYO3AOP1_0308 316334 - 316927 + | AMMECR1 domain protein SYO3AOP1_0309 317792 - 316917 - | glycosyl transferase family 2 SYO3AOP1_0310 319342 - 317957 - | RND efflux system, outer membrane lipoprotein, NodT family SYO3AOP1_0311 320429 - 319344 - | secretion protein HlyD family protein SYO3AOP1_0312 321197 - 320469 - | ABC transporter related TERM 179 320683 - 320708 + g 73 -8.3 -3.55084 | opp_overlap 320692 AGTATAGGTGGATCT GTAGCTAAAGC CCTT GCTATGGCTAC TCTTTGCTGTTCACC SYO3AOP1_0313 322345 - 321203 - | protein of unknown function DUF214 TERM 180 322387 - 322377 - H 72 -2.6 -5.38549 | opp_overlap 322377 CTCAAACAAGAAAAA TAAA AAA TTTA TAGTTAGCTTTTATA SYO3AOP1_0314 322629 - 323651 + | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding TERM 181 323979 - 323964 - g 72 -9 -2.71011 | opp_overlap 323954 323960 323964 ATTGGGGTGGAACTA CCTTGC TAAT GCAAGG TGGCTTAAATCCGGA TERM 182 323964 - 323979 + G 71 -9 -2.54896 | opp_overlap 323964, overlap 323954 323960 ATTGGGGTGGAACTA CCTTGC TAAT GCAAGG TGGCTTAAATCCGGA SYO3AOP1_0315 323648 - 324730 + | Radical SAM domain protein SYO3AOP1_0316 324749 - 325102 + | hypothetical protein SYO3AOP1_0317 326268 - 325111 - | 8-amino-7-oxononanoate synthase SYO3AOP1_0318 326894 - 326271 - | imidazole glycerol phosphate synthase, glutamine amidotransferase subunit SYO3AOP1_0319 327642 - 326878 - | tryptophan synthase, alpha subunit TERM 183 328013 - 328023 + r 70 -4 -4.95896 | CACTTTATGATTGGT GAAT GGT ATTC TTTTTATGACTTTGT SYO3AOP1_0320 328731 - 328138 - | small GTP-binding protein SYO3AOP1_0321 329961 - 328735 - | ATP-dependent Clp protease, ATP-binding subunit ClpX TERM 184 328982 - 328996 + g 72 -3.6 -5.15381 | AGTAAGCTTTTGTAT TGTTTT ATC AAAGCA TTTTTTGGCTCTGTT SYO3AOP1_0322 330572 - 329967 - | ATP-dependent Clp protease, proteolytic subunit ClpP TERM 185 330428 - 330416 - G 74 -4.1 -5.27023 | ATTCTAAAAATAAAA GCTGT GCA ACAAC TAAGTTAGCAATATG TERM 186 330515 - 330526 + g 72 -5.8 -4.39998 | TATCGTATGCTCTTT CACC TCTT GGTG TTTGTTCTATAACTA SYO3AOP1_0323 331887 - 330565 - | trigger factor SYO3AOP1_0324 332104 - 332505 + | S-adenosylmethionine decarboxylase proenzyme SYO3AOP1_0325 332580 - 333002 + | pyridoxamine 5'-phosphate oxidase-related FMN-binding TERM 187 333099 - 333089 - f 84 -5.4 -5.38348 | AAAAACATTAAAAAA GAAG ATC CTTC GGACTAAAGTCCTCG TERM 188 333365 - 333353 - f 72 -3.5 -5.15381 | opp_overlap 333353 AACATATTGAAAAAA TTTTT TTA AAAAA TATATTAATACCTTG SYO3AOP1_0326 333412 - 335031 + | DNA primase TERM 189 335563 - 335549 - g 88 -8.6 -4.49316 | opp_overlap 335548 335558, overlap 335542 AGGATGAAGAAGAAA CTTCAG AAT CTGAAG AGTTTAGTTTGGAAA TERM 190 336446 - 336433 - g 80 -5.9 -5.04385 | GAGATTGCCAAAAAA GCCGG AATG CCAGC TGATAAAGTAAGAAA SYO3AOP1_0327 335047 - 336819 + | RNA polymerase, sigma 70 subunit, RpoD family SYO3AOP1_0328 337361 - 337786 + | hypothetical protein SYO3AOP1_0329 337789 - 338484 + | two component transcriptional regulator, winged helix family SYO3AOP1_0330 338983 - 338489 - | hypothetical protein SYO3AOP1_0331 339935 - 339357 - | CDP-alcohol phosphatidyltransferase SYO3AOP1_0332 340543 - 339932 - | Phosphoribosylanthranilate isomerase SYO3AOP1_0333 341508 - 340540 - | Transketolase central region SYO3AOP1_0334 342373 - 341513 - | Transketolase domain protein SYO3AOP1_0335 343277 - 342657 - | hypothetical protein SYO3AOP1_0336 344956 - 343283 - | Tetratricopeptide TPR_2 repeat protein TERM 191 343453 - 343468 + g 81 -4 -5.63504 | ATACCGGGTCATCGG GCATTT TTTC AAGTGC TTTTTTTATCAGCTT TERM 192 344073 - 344083 + g 81 -4 -5.52909 | overlap 344082 GGATTATCCGGATTT TCTT GTG AAGA TTTTTTTAAATCTTG TERM 193 344463 - 344473 + g 91 -5.4 -5.88565 | opp_overlap 344463 ATTTTGTAATAGATA GATG GGT CATC TTTTTTTATTGTAGC SYO3AOP1_0337 345807 - 344956 - | UspA domain protein TERM 194 345587 - 345603 + g 76 -3.7 -5.45802 | overlap 345589 TTTTGTTTATATTCA GATAAAG TTT CTTTAGC TTTTTCTTTTAAAAC SYO3AOP1_0338 346294 - 345797 - | 3-isopropylmalate dehydratase, small subunit SYO3AOP1_0339 347309 - 346287 - | hypothetical protein SYO3AOP1_0340 348751 - 347312 - | methyltransferase TERM 195 349580 - 349594 + G 73 -4.3 -5.00884 | TATCTATATGCATAT GCTAT TGGTT ATAGC TTTTTTAGAAAAAGT SYO3AOP1_0341 348899 - 349624 + | HMG-I and HMG-Y DNA-binding domain protein TERM 196 350010 - 349998 - g 73 -7.7 -3.70773 | TGGCACACTCAACAA TCGCA TCA TGCGA AGAAAGAGGTCAAAA SYO3AOP1_0342 349784 - 351445 + | transposase SYO3AOP1_0343 351495 - 352673 + | tryptophanyl-tRNA synthetase SYO3AOP1_0344 352765 - 353127 + | hypothetical protein SYO3AOP1_0345 353162 - 353569 + | hypothetical protein TERM 197 353579 - 353599 + T 73 -8.2 -3.56921 | overlap 353579 353580 AAATAATTTTCTTTC GCCCTCCC TTTAT GGGAGGGA TCTTATTATATTCAA TERM 198 353580 - 353598 + T 87 -11.7 -2.73429 | overlap 353579 353579 AATAATTTTCTTTCG CCCTCCC TTTAT GGGAGGG ATCTTATTATATTCA TERM 199 354983 - 355001 + T 70 -7.3 -3.64599 | opp_overlap 354982 TTCCACTCGGAACAT GCGGGTC ACTAA GCCCCGC TTTCGCGTCTGCTCG TERM 200 355158 - 355181 + T 78 -8.9 -3.51232 | gap 1, overlap 355161 CCGCCTGACATTGTC CCT-GCCGTG GATAA CACGGCTAGG TTAGTTTACCCACAC TERM 201 355161 - 355177 + T 74 -9.4 -2.6342 | overlap 355158 CCTGACATTGTCCCT GCCGTG GATAA CACGGC TAGGTTAGTTTACCC TERM 202 356068 - 356086 + T 74 -8.9 -3.10894 | overlap 356070 CTTGGAGTTCCGGCG GACAGGT TTCTC ACCTGTC TTCGCTGCTACTCAT TERM 203 356866 - 356878 + T 88 -9.1 -4.2354 | AGGTTCTCTTTCACT CCCCT TGC AGGGG TTCTTTTCACCTTTC TERM 204 357737 - 357756 + T 72 -9.2 -2.65808 | opp_overlap 357725 357728, overlap 357734 AAAGGAGGTGATCCA GCCCCAGG TTCC CCTAGGGC TACCTTGTTACGACT TERM 205 358647 - 358667 + T 85 -10.5 -3.53343 | opp_overlap 358646 CAGTTTGGAAGGCAG TTTCACGGT TGA GCCGTGAAA TTTCACCAACCACTT TERM 206 358827 - 358816 - T 72 -5.8 -4.36914 | opp_overlap 358826 TCTTCCCCCAGAAAA GGTG TTTA CACC CCGAAGGGCTTCATC TERM 207 359259 - 359237 - T 79 -10 -2.87527 | overlap 359236 359249 GAGCCAGGATCAAAC TCTCCAAAAG AAT CTTTTGAAGA CCTCGCTCATCTCTT TERM 208 359422 - 359439 + T 78 -2 -5.74684 | overlap 359426 359427 ATTTTATCCCTCTTT CCTTTT CTTGTC AAGAGG TTTTTCTTTTTCTTA SYO3AOP1_0346 360783 - 359986 - | carboxylesterase SYO3AOP1_0347 362146 - 360785 - | aminotransferase class-III TERM 209 361915 - 361904 - GR 83 -5.8 -5.27335 | opp_overlap 361905, overlap 361905 TTCTTCAAATAAAAA CTGG GACG CCAG CTGTCCCATTCTATC SYO3AOP1_0348 362792 - 362094 - | 2,3-diketo-5-methylthio-1-phosphopentane phosphatase SYO3AOP1_0349 366054 - 363010 - | acriflavin resistance protein TERM 210 365108 - 365121 + g 71 -5.3 -4.60949 | TATATCCTGATACCT TCCTT TTCC AAGGA TTTATTTATACTCTC TERM 211 365298 - 365315 + g 71 -5.6 -4.70659 | ATAGGTTTATGTATC TACCAC CGGAAA GTGGTA TTTTTACATCTAAAA SYO3AOP1_0350 367004 - 366051 - | efflux transporter, RND family, MFP subunit TERM 212 366845 - 366832 - G 76 -5.3 -4.94058 | CCAACTGAAACAAAA GGATA AAAG TATCC CTCAGTTTTTGATGT SYO3AOP1_0351 368218 - 367001 - | outer membrane efflux protein SYO3AOP1_0352 369617 - 368316 - | integral membrane sensor signal transduction histidine kinase TERM 213 369194 - 369184 - G 72 -2.6 -5.43866 | opp_overlap 369174 369184, overlap 369163 CAACCTGTAAAAAAA TTTT TAG AAAA CTTTTTTAACATTGC SYO3AOP1_0353 370276 - 369614 - | two component transcriptional regulator, winged helix family TERM 214 370235 - 370245 + g 71 -5.4 -4.56629 | opp_overlap 370235 ACCTTTCTTAATAAG CCTT CCT AAGG TTTTATCATCTTCTA SYO3AOP1_0354 370988 - 371839 + | phosphoesterase DHHA1 SYO3AOP1_0355 371850 - 372437 + | transcriptional regulator, TetR family SYO3AOP1_0356 372434 - 372877 + | D-tyrosyl-tRNA(Tyr) deacylase SYO3AOP1_0357 373092 - 372880 - | hypothetical protein SYO3AOP1_0358 373491 - 375542 + | DNA topoisomerase I TERM 215 375567 - 375546 - f 100 -10.1 -5.8096 | overlap 375547 TATAAAAAATAAAAA GGGTCGGGA TTGC TCCCGACCA GGTATGGAGGGGGAG TERM 216 375566 - 375547 - f 100 -13.6 -4.04916 | overlap 375546 ATAAAAAATAAAAAG GGTCGGGA TTGC TCCCGACC AGGTATGGAGGGGGA SYO3AOP1_0359 375670 - 375969 + | glutamyl-tRNA(Gln) amidotransferase, C subunit TERM 217 376151 - 376124 - f 100 -12.8 -3.15366 | overlap 376142 TGGAAAAGTGGAAGA GTAGGGGCGATT CATG AATCGCCCTTAC GAAAGTAAAGTATTG SYO3AOP1_0360 376252 - 377271 + | recA protein SYO3AOP1_0361 377261 - 378379 + | twitching motility protein SYO3AOP1_0363 378778 - 379707 + | riboflavin biosynthesis protein RibF TERM 218 380522 - 380539 + G 75 -4.9 -5.01823 | CAGTTAATATATGAC TCTATCT TAAT AGATGGA TTTTCTTATTATTAT TERM 219 381408 - 381392 - g 71 -2.3 -5.47399 | TTAATTGCAAAAAAA GCATA CTATCTT TATGC TTACACATTTTTCTC TERM 220 381420 - 381432 + G 82 -7.7 -4.3739 | ATGCTTACACATTTT TCTCC TCA GGAGA TTTTGTAAGAGCATC SYO3AOP1_0364 379688 - 382504 + | Tetratricopeptide TPR_2 repeat protein TERM 221 382729 - 382743 + G 82 -8.6 -4.03234 | opp_overlap 382729 AAAAAGCAAAAGAAA TTAGCC ATA GGCTAA TTTATGTACCAGAAG TERM 222 382743 - 382729 - g 93 -8.6 -4.88646 | opp_overlap 382729 AAAAAGCAAAAGAAA TTAGCC ATA GGCTAA TTTATGTACCAGAAG SYO3AOP1_0365 382509 - 383009 + | 16S rRNA processing protein RimM SYO3AOP1_0366 383010 - 384020 + | permease YjgP/YjgQ family protein TERM 223 384405 - 384425 + T 73 -8.2 -3.55262 | opp_overlap 384407, overlap 384403 384407 ATTGGAAATATAGAA AACCCGGG ATAGA CCCGGGTG TATTTGATTAAAGTT TERM 224 384407 - 384423 + T 85 -10.8 -3.34468 | opp_overlap 384407, overlap 384405 384403 TGGAAATATAGAAAA CCCGGG ATAGA CCCGGG TGTATTTGATTAAAG TERM 225 384423 - 384407 - T 100 -10.8 -4.74013 | opp_overlap 384407 384405 384403 TGGAAATATAGAAAA CCCGGG ATAGA CCCGGG TGTATTTGATTAAAG SYO3AOP1_0367 384639 - 384433 - | cold-shock DNA-binding domain protein SYO3AOP1_0368 384867 - 384661 - | cold-shock DNA-binding domain protein SYO3AOP1_0369 385160 - 386125 + | molybdenum cofactor biosynthesis protein A TERM 226 386166 - 386136 - f 74 -7 -4.16943 | opp_overlap 386141 GTTGATATGTTAAAA TAGTATTAATCTGC CTT GGAGGTTAATACTA TGGATGTTGGAACTT TERM 227 386309 - 386299 - g 77 -4 -5.38047 | opp_overlap 386299 TACTGACAGAAAAAA GTTT AAA AAAC CTTTTCTTGATACTA SYO3AOP1_0370 386261 - 386812 + | Thiamine-phosphate diphosphorylase TERM 228 386946 - 386976 + T 74 -7.6 -3.93262 | opp_overlap 386953 TAAATCTGTCATTCT GAGTGAAGCGAAGA ATC TCCTCTTTTCACTC TTTCACTTTCTTAAA TERM 229 387126 - 387153 + T 73 -7.8 -3.61468 | overlap 387131 TCTCACTTATTCATT GTACGGGCAATT CATG AATTGCCTCTAC TTGCTTTCCTTAAAA TERM 230 387131 - 387148 + T 72 -8.5 -2.99998 | overlap 387126 CTTATTCATTGTACG GGCAATT CATG AATTGCC TCTACTTGCTTTCCT SYO3AOP1_0371 388048 - 387245 - | protein of unknown function DUF1009 TERM 231 387339 - 387352 + g 79 -6.7 -4.68846 | TTATTTGCCTCGACT GCCAA AACT TTGGC TTTTGCTTTCTTCAT TERM 232 387811 - 387825 + g 82 -8.6 -4.08216 | opp_overlap 387809 387808 387811 GAAAATGAAAAAGTA TAGAGC TAT GCTCTA TTTTCCCAAGCATAA TERM 233 387825 - 387811 - G 76 -8.6 -3.38208 | opp_overlap 387811, overlap 387809 387808 GAAAATGAAAAAGTA TAGAGC TAT GCTCTA TTTTCCCAAGCATAA SYO3AOP1_0372 388860 - 388045 - | acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase TERM 234 388088 - 388100 + g 72 -2.6 -5.4593 | CTTTTTGAAGCTTCT GGGG CTATT CCTC TTTTTGTTGTTTTGA TERM 235 388811 - 388790 - G 100 -10.2 -5.2015 | TCAATAATAGAAAAA GGACCAAC CTTAAC GTTGGTCC CAAGCTTTGCTTTAT SYO3AOP1_0373 389187 - 388870 - | thioredoxin SYO3AOP1_0374 389506 - 389192 - | transcriptional regulator, ArsR family TERM 236 389537 - 389551 + r 87 -4.4 -5.76633 | opp_overlap 389537 TTTAGAATATTAGAA TATATT ATA AATATA TTTTTTTATATATGC SYO3AOP1_0375 390795 - 389920 - | CoB--CoM heterodisulfide reductase SYO3AOP1_0376 391838 - 390792 - | succinate dehydrogenase and fumarate reductase iron-sulfur protein TERM 237 391896 - 391910 + r 88 -3.6 -6.04324 | opp_overlap 391896 TATTTTTTATAAAAA TCAAAT ACT GTTTGA TTTTTTCTTTTTTAA TERM 238 391996 - 392014 + r 77 -3 -5.54338 | overlap 391997 ATTACGAGATTCTCC GCCGGCTT CAG AAGACGGA TTTTTATTTTCCTTG SYO3AOP1_0377 393155 - 392205 - | 2-dehydropantoate 2-reductase SYO3AOP1_0378 394222 - 393152 - | threonine synthase SYO3AOP1_0379 395029 - 394241 - | ABC transporter related TERM 239 394584 - 394567 - G 78 -7 -4.35483 | opp_overlap 394567 394566 CTGGATTATAAGAAA TTGCCC GTGCAA GGGCAA CTCTTTTTCTCATAC TERM 240 395649 - 395629 - g 77 -4.1 -5.3236 | opp_overlap 395634, overlap 395632 ATAATGGATAAAAAA GAATACTTT GAA AAAGTATTA AACAGATCCACAGAG TERM 241 395646 - 395632 - g 74 -5.8 -4.73105 | opp_overlap 395634, overlap 395629 ATGGATAAAAAAGAA TACTTT GAA AAAGTA TTAAACAGATCCACA SYO3AOP1_0381 395617 - 396852 + | transposase mutator type SYO3AOP1_0382 397853 - 398767 + | signal recognition particle-docking protein FtsY SYO3AOP1_0383 398774 - 400171 + | pyruvate kinase TERM 242 400359 - 400373 + T 79 -10 -2.96722 | opp_overlap 400357, overlap 400358 CATTTTGAAGCTACA GCGAAG AAT CTTCGC CTTTGTCCCTCTACA SYO3AOP1_0384 402014 - 400713 - | CBS domain containing protein SYO3AOP1_0385 403311 - 402007 - | protein of unknown function DUF21 TERM 243 402483 - 402463 - GR 78 -6.9 -4.40561 | opp_overlap 402463 402461, overlap 402460 TTCTGGCAAAAATAA GATTGCTTT TAT AAAGCTATC TATCTTCTCTTCTTT TERM 244 402534 - 402522 - GR 82 -4.9 -5.32396 | overlap 402517 AGATTAAAAATAAAA TATCT TTT AGATA AATAACTCCAACCAC SYO3AOP1_0386 404221 - 403280 - | oligopeptide/dipeptide ABC transporter, ATPase subunit SYO3AOP1_0387 405823 - 404516 - | restriction modification system DNA specificity domain TERM 245 405215 - 405205 - G 71 -5.4 -4.70659 | CTCCATATGTAAAAA GATG CTT CATC ATAGACTTTTTAAGC SYO3AOP1_0388 407061 - 405883 - | aminotransferase class I and II TERM 246 405949 - 405975 + g 76 -7.4 -4.17048 | opp_overlap 405949, overlap 405950 AATATTATCCATAGA TGTTGCATAAGA TAA TCTTATGTAACC TTCTTTTCCAAAGGC TERM 247 405950 - 405974 + g 84 -10.9 -3.09908 | opp_overlap 405949, overlap 405949 ATATTATCCATAGAT GTTGCATAAGA TAA TCTTATGTAAC CTTCTTTTCCAAAGG SYO3AOP1_0389 408077 - 407085 - | glycosyl transferase family 9 TERM 248 407825 - 407810 - G 77 -4 -5.43553 | ATGCAAAAAATAAAA CATAAG ATGC CCTATG AGACCTATGGGGAGA SYO3AOP1_0390 408150 - 408647 + | putative membrane protein of unknown function SYO3AOP1_0391 409299 - 408649 - | hypothetical protein SYO3AOP1_0392 409412 - 410407 + | 3-dehydroquinate synthase TERM 249 410420 - 410410 - g 70 -4 -4.99043 | TTTGGAGAAATAAAA TGAA AAC TTCA CAAAAAGTAGGAATA TERM 250 410800 - 410790 - g 71 -5.4 -4.5528 | overlap 410784 410780 CAAAATCAAGCAAAA GTTG CTT CAAC GGAAGAGATGATAAA TERM 251 411463 - 411453 - g 74 -6.8 -4.2231 | opp_overlap 411453 411452 AACGATGATTCAAAA GCTG GTG CAGC ATTTAGATTTATACC TERM 252 411556 - 411543 - g 72 -2.4 -5.38047 | TATGTAGATAAAAAA GAAG AAATTA CTTC AAACGGAACCACTAC SYO3AOP1_0393 410409 - 411956 + | Mammalian cell entry related domain protein SYO3AOP1_0394 411973 - 412686 + | transcriptional regulator, Crp/Fnr family SYO3AOP1_0395 414512 - 412977 - | ResB family protein SYO3AOP1_0396 414795 - 414505 - | putative stage V sporulation protein G SYO3AOP1_0397 415775 - 414801 - | 6-phosphofructokinase TERM 253 414970 - 414956 - G 72 -5 -4.87626 | TTTCAACAGCAAAAA CTCCAA ATT TTGAAG CCATTACTCTATCGT TERM 254 415297 - 415310 + g 71 -3.1 -5.24647 | overlap 415292 415291 AAGATTCTTTCATGG GACAT GGTT GTGTC TTTTATTTTATCTAT SYO3AOP1_0398 416056 - 415775 - | hypothetical protein TERM 255 416314 - 416302 - R 88 -6.3 -5.4505 | TCTCTTAAGAAAAAA CTTTC CGA GAAAG GGGCAAGAACTTGCT TERM 256 416605 - 416583 - R 79 -3.4 -5.59502 | CAAAAAATCAAAAAA GAGATTCTGC CGT GAAAAACCTC TTTTTATGTGATTAT SYO3AOP1_0399 416856 - 416617 - | nitrogen-fixing NifU domain protein SYO3AOP1_0400 416933 - 417547 + | dTMP kinase SYO3AOP1_0401 417544 - 418482 + | DNA polymerase III delta' subunit SYO3AOP1_0402 418475 - 419347 + | PSP1 domain protein SYO3AOP1_0403 419344 - 420291 + | KpsF/GutQ family protein SYO3AOP1_0404 421097 - 420288 - | Radical SAM domain protein TERM 257 420968 - 420942 - G 81 -10.2 -3.14146 | TATAAGACCATTTAA GCCAGATGCACA GAA TGCACATCTGAC CGAACATCCAACCTG SYO3AOP1_0405 422224 - 421094 - | 2-nitropropane dioxygenase NPD SYO3AOP1_0406 422619 - 422239 - | hypothetical protein SYO3AOP1_0407 424007 - 422700 - | major facilitator superfamily MFS_1 SYO3AOP1_0408 425181 - 424201 - | transposase IS116/IS110/IS902 family protein SYO3AOP1_0409 425587 - 426540 + | Polyprenyl synthetase SYO3AOP1_0410 426748 - 427152 + | aspartate 1-decarboxylase TERM 258 427512 - 427497 - g 82 -7.6 -4.54449 | ATACTTTACAGAAAA TGCTCT CAAA AGAGCA AACTACTTTATGCCA SYO3AOP1_0411 427171 - 428514 + | Lytic transglycosylase catalytic SYO3AOP1_0412 428511 - 429572 + | 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase TERM 259 429779 - 429750 - g 78 -2.3 -5.8096 | TAGAAAAAACAAAAA TTCTTATGTTTTA ATCT TAACACACAAAAA AGCCAAAAATTTATT SYO3AOP1_0413 429565 - 429993 + | hypothetical protein SYO3AOP1_0414 429997 - 430341 + | hypothetical protein TERM 260 431106 - 431093 - gf 79 -6.7 -4.67641 | opp_overlap 431093 ATTCCAAAAGTAAAA GCTTG TATC CAAGC TTTAGAGAAAGGCGT SYO3AOP1_0415 430316 - 431215 + | acetylglutamate kinase TERM 261 432506 - 432519 + G 80 -5.3 -5.18371 | opp_overlap 432485 432506 TGAAGTTGCAAAAAG CAACA AAGC TGTTG TTTTATTTTCTCCCG SYO3AOP1_0416 431226 - 432623 + | UDP-N-acetylmuramoylalanine/D-glutamate ligase SYO3AOP1_0417 432610 - 433707 + | cell cycle protein TERM 262 434301 - 434291 - g 81 -4 -5.58074 | overlap 434292 CAAGGAGCAAAAAAA CTTT CTG AAAG CATAATATCCTTAGC TERM 263 434643 - 434630 - g 72 -2.4 -5.43866 | opp_overlap 434630, overlap 434633 GAAGTTTTAAAAAAA GCAT TAGAAG ATGC TTTTAACAAAGATTT SYO3AOP1_0418 433709 - 434752 + | UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase SYO3AOP1_0419 434733 - 435599 + | UDP-N-acetylenolpyruvoylglucosamine reductase TERM 264 436028 - 436000 - g 71 -6.7 -4.12188 | opp_overlap 436001 436003, overlap 436001 CCAGCAGTCGTAAAA GCTCCAACAGAAG GGT CTTCTATTGGTGT TTATATAGTAAATAA TERM 265 436001 - 436027 + G 79 -8 -4.0942 | opp_overlap 436000 436001, overlap 436003 CAGCAGTCGTAAAAG CTCCAACAGAAG GGT CTTCTATTGGTG TTTATATAGTAAATA TERM 266 436027 - 436001 - g 81 -10.2 -3.06991 | opp_overlap 436001 436003, overlap 436000 CAGCAGTCGTAAAAG CTCCAACAGAAG GGT CTTCTATTGGTG TTTATATAGTAAATA TERM 267 436003 - 436025 + G 80 -9.2 -3.6393 | opp_overlap 436001 436000, overlap 436001 GCAGTCGTAAAAGCT CCAACAGAAG GGT CTTCTATTGG TGTTTATATAGTAAA SYO3AOP1_0420 435592 - 436491 + | D-alanine/D-alanine ligase TERM 268 437080 - 437064 - g 85 -8.1 -4.45117 | overlap 437073 GATAGCCTAAATAAA GCTAAAA TAT TTTTAGC AAATAAAAATCTAAA SYO3AOP1_0421 436488 - 437168 + | hypothetical protein TERM 269 438149 - 438165 + G 70 -8 -3.05935 | ATTGTTTTAACTGGA GGAGTG GCAAA CACTCC TTACATCCAACATCT TERM 270 438372 - 438382 + G 74 -4 -5.15634 | TCAATATATCTGATA CTTT TAC AAAG TTTTTTGATAAAATA SYO3AOP1_0422 437165 - 438412 + | cell division protein FtsA SYO3AOP1_0423 438433 - 439578 + | cell division protein FtsZ SYO3AOP1_0424 439575 - 440090 + | CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase SYO3AOP1_0425 440081 - 440668 + | protein of unknown function DUF205 TERM 271 440892 - 440865 - f 77 -10 -2.74605 | overlap 440870 TCTTTTGAAAAGTGA GTAGAGGCAATT CATG AATTGCCTATAC AGTGAATAAATGAGA TERM 272 440887 - 440870 - f 71 -8.5 -2.8619 | overlap 440865 TGAAAAGTGAGTAGA GGCAATT CATG AATTGCC TATACAGTGAATAAA SYO3AOP1_0426 441112 - 441687 + | class II aldolase/adducin family protein SYO3AOP1_0427 441657 - 442262 + | hypothetical protein TERM 273 442253 - 442242 - T 77 -3 -5.626 | opp_overlap 442242 442234 TATTTGATAAAAAAA GATT TAAA AATC TTATTTTAATATTTT SYO3AOP1_0428 442609 - 442259 - | Rhodanese domain protein SYO3AOP1_0429 442971 - 443771 + | cytochrome c assembly protein SYO3AOP1_0430 444136 - 443768 - | hypothetical protein TERM 274 444151 - 444169 + r 73 -4.4 -5.10029 | opp_overlap 444150 444152, overlap 444152 TGACAGAAGAAAATC AGGGGGCT GTT AACCCCCA TTTTTTAGAATTACT TERM 275 444152 - 444168 + r 73 -7.9 -3.64933 | opp_overlap 444150 444152, overlap 444151 GACAGAAGAAAATCA GGGGGCT GTT AACCCCC ATTTTTTAGAATTAC TERM 276 444168 - 444152 - R 82 -10.1 -3.31191 | opp_overlap 444152 444151, overlap 444150 GACAGAAGAAAATCA GGGGGCT GTT AACCCCC ATTTTTTAGAATTAC SYO3AOP1_0431 444503 - 444180 - | cytochrome c class I SYO3AOP1_0432 444998 - 445603 + | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen TERM 277 445636 - 445607 - f 77 -7.9 -4.13244 | opp_overlap 445612 TTACAAGAATAATAA TATATGGGGGC TGTTTTTC GCCCCCTTATA CAAACAACCATGATA SYO3AOP1_0433 445610 - 445972 + | hypothetical protein SYO3AOP1_0434 447293 - 445953 - | major facilitator superfamily MFS_1 SYO3AOP1_0435 447478 - 447290 - | hypothetical protein SYO3AOP1_0436 450358 - 447806 - | ribonucleoside-diphosphate reductase, alpha subunit TERM 278 449629 - 449652 + g 70 -4.6 -4.84353 | CTGTTCCAACTCCGC CTGCATATTT TGCT AAGAATGCAG TTTCTTTTGCTTTAT TERM 279 450293 - 450304 + g 71 -3 -5.13741 | AGCATCTACAAGCTT TTTC ATTT GAAA TTTTTCTTGGGTTCC SYO3AOP1_0437 451628 - 450648 - | Ribonucleoside-diphosphate reductase TERM 280 451687 - 451670 - H 76 -7.1 -4.21465 | opp_overlap 451672 TGTAAAACTAAATAA TACACTA AATA TAGTGTA ATGTCAAAAAATTTA TERM 281 452037 - 452063 + H 100 -7.3 -5.4505 | gap 1, overlap 452038 GTTGTGTTTTCTCCC G-GGCGCTTCAT AAAA AGGAAGCGCCTC TTTTTTCTTAAAAAA TERM 282 452038 - 452061 + H 100 -11 -4.36592 | overlap 452037 TTGTGTTTTCTCCCG GGCGCTTCAT AAAA AGGAAGCGCC TCTTTTTTCTTAAAA TERM 283 454048 - 454032 - g 76 -9.5 -3.16492 | opp_overlap 454032, overlap 454030 GCATACCCAGGAATA TCTGCAA AAG TTGCAGA TCTAATTTTACCATC TERM 284 454032 - 454048 + G 76 -9.5 -3.10537 | opp_overlap 454030 454032 GCATACCCAGGAATA TCTGCAA AAG TTGCAGA TCTAATTTTACCATC TERM 285 454995 - 455007 + G 74 -7.7 -3.77023 | opp_overlap 454992 454995, overlap 454992 454993 GGAAGAAATAGACCA CCAAG AGG CTTGG TATTTGTTCCTTGGT SYO3AOP1_0438 452322 - 455126 + | periplasmic nitrate reductase, large subunit SYO3AOP1_0439 455145 - 455939 + | MauM/NapG family ferredoxin-type protein TERM 286 456485 - 456497 + G 72 -2.7 -5.35815 | TTTTGGATGGACGAT TGTTG CTT CAATA TTTTTCTTTGATCTA SYO3AOP1_0440 455940 - 456818 + | ferredoxin-type protein, NapH/MauN family SYO3AOP1_0441 456811 - 457461 + | Nitrate reductase cytochrome c-type subunit (NapB) TERM 287 457933 - 457921 - g 75 -4.9 -5.00138 | opp_overlap 457921 TATTTAAACCAAAAA TTATC ACT GATAA ATGTTCTGGCTGCGG SYO3AOP1_0442 457461 - 458000 + | 4Fe-4S ferredoxin iron-sulfur binding domain protein TERM 288 458203 - 458170 - g 78 -6.9 -4.39329 | overlap 458172 ATTTTAGATAAGAAA TCGGGAAAGCTAATT AGAA AATTAACTTTACCAA AATTTGAAGATTTTA TERM 289 458854 - 458883 + G 82 -6.5 -4.9725 | opp_overlap 458843 458854 TTAACAACGGTAAAA GGTCATCATTCTA CAGT TGGAGTTATGACC TTTTTATCTGAAGAT SYO3AOP1_0443 458002 - 458952 + | WD-40 repeat protein SYO3AOP1_0444 458952 - 459311 + | NapD family protein SYO3AOP1_0445 459556 - 460023 + | nitrous-oxide reductase accessory protein NosL TERM 290 460147 - 460133 - g 72 -4.9 -4.84492 | GCAAGTAGAACAAAA GGAGC AAAAA GCCCC AACAAGTCAAATTTC SYO3AOP1_0446 460047 - 460556 + | cytochrome c class I TERM 291 460569 - 460590 + F 72 -7.3 -3.8917 | overlap 460577 460589 TAGAATTTTTGTTTA CCCACAC TGAACCTT GTGTGGG TTCTTATACTTAGAA TERM 292 461057 - 461073 + F 71 -8 -3.35762 | overlap 461056 461052 AATTATTATTTGGTG CAGGGA TAATT TCCCTG TCTTCATTGTTAATT TERM 293 463030 - 463052 + F 100 -8.4 -5.53288 | opp_overlap 463033 463034, overlap 463034 CTAGTTAAATTAAAC AAAGGGGGGA GGG TTCCCCCTTA TTTTTTTCAATTCAA TERM 294 463049 - 463033 - f 82 -7.9 -4.62772 | opp_overlap 463030 463034, overlap 463034 GTTAAATTAAACAAA GGGGGGA GGG TTCCCCC TTATTTTTTTCAATT TERM 295 463034 - 463049 + F 100 -10.4 -4.83715 | opp_overlap 463033 463034, overlap 463030 TTAAATTAAACAAAG GGGGGA GGGT TCCCCC TTATTTTTTTCAATT TERM 296 463049 - 463034 - f 83 -10.4 -3.36578 | opp_overlap 463034 463030, overlap 463033 TTAAATTAAACAAAG GGGGGA GGGT TCCCCC TTATTTTTTTCAATT SYO3AOP1_0448 463102 - 463668 + | hypothetical protein SYO3AOP1_0449 463665 - 464138 + | nitrous-oxide reductase accessory protein NosL SYO3AOP1_0451 465387 - 466091 + | ABC transporter related SYO3AOP1_0452 466073 - 466840 + | nitrous-oxide metabolic protein NosY TERM 297 467286 - 467270 - g 88 -3.7 -5.95539 | opp_overlap 467270 TTGGAAACAAAAAAA GTAGGTT ATA AATCTAC TTTGGTTGCGTTTAG SYO3AOP1_0453 467093 - 468109 + | putative transcriptional regulator, AsnC family TERM 298 468120 - 468139 + F 83 -8 -4.24149 | opp_overlap 468123 468125 TCTAAATCAATGACC TAACACTA TATA TAGTGTTA TTATTATTTTAGTAC TERM 299 468843 - 468830 - g 73 -8.1 -3.56593 | opp_overlap 468829 468827 468826 ACCTTACAATCAGAA TGGGC AGGG GCCCA ATCGTTTAGCTCATT SYO3AOP1_0454 468176 - 470287 + | anaerobic ribonucleoside-triphosphate reductase SYO3AOP1_0455 470274 - 470459 + | hypothetical protein SYO3AOP1_0456 470537 - 471220 + | anaerobic ribonucleoside-triphosphate reductase activating protein SYO3AOP1_0457 471966 - 471217 - | uroporphyrin-III C-methyltransferase TERM 300 471874 - 471862 - G 71 -7.7 -3.39895 | opp_overlap 471861 TTCTTCATTAATTAA CCTGT CAT ACAGG ATTACATCTGCATTT SYO3AOP1_0458 473041 - 471980 - | cytochrome d1 heme region SYO3AOP1_0459 474165 - 473038 - | Radical SAM domain protein SYO3AOP1_0460 474637 - 474149 - | 4-vinyl reductase 4VR TERM 301 474421 - 474433 + g 72 -3.5 -5.186 | opp_overlap 474421 TAACAAAATTAATGA TATTT GAC AAATA TTTTTCTATGTTTTG SYO3AOP1_0461 476297 - 474627 - | cytochrome d1 heme region TERM 302 476254 - 476224 - G 71 -7.6 -3.44206 | overlap 476225 CAATATTTATTATAA GTTTCCTCCCCC ACGACAG GGGAGAGGAAAA AAAATAGAAGGTTTA TERM 303 476253 - 476225 - G 82 -11.1 -2.66042 | overlap 476224 AATATTTATTATAAG TTTCCTCCCCC ACGACAG GGGAGAGGAAA AAAAATAGAAGGTTT SYO3AOP1_0462 477958 - 476297 - | Hydroxylamine reductase SYO3AOP1_0463 479335 - 477980 - | hypothetical protein TERM 304 478888 - 478902 + g 70 -7.2 -3.64487 | opp_overlap 478873 TAAATCTTTGATCAT CAAGAT TCA ATCTTG TTCTTCCAAATATAA TERM 305 479299 - 479313 + g 74 -2.1 -5.61824 | overlap 479287 AGACTGCTAAAATTG CAGTT GATAA GACTG TTTTTTTGAGTTTTG SYO3AOP1_0464 479512 - 480099 + | siroheme synthase SYO3AOP1_0465 480096 - 480767 + | transcriptional regulator, Crp/Fnr family SYO3AOP1_0466 481055 - 480753 - | protein of unknown function DUF59 SYO3AOP1_0467 482289 - 481057 - | hypothetical protein TERM 306 481581 - 481557 - G 70 -8.1 -3.07401 | AAAAGATTATAGATA TTTCCTTATTT AGT AAATAAGAAAA ACAAGTGCTTACTAT SYO3AOP1_0468 482580 - 482302 - | hypothetical protein SYO3AOP1_0469 482759 - 482986 + | hypothetical protein TERM 307 483021 - 482984 - f 82 -5.1 -5.44721 | opp_overlap 482987, overlap 482987 482989 ATCATCGGAAAAAAA TAATCTTTTGCATTGAT TTGA ATCAATGAAAAAAATTT ACGACTCATATATCC TERM 308 483018 - 482987 - f 83 -6.8 -4.80853 | opp_overlap 482987, overlap 482984 482989 ATCGGAAAAAAATAA TCTTTTGCATTGAT TTGA ATCAATGAAAAAAA TTTACGACTCATATA SYO3AOP1_0470 483275 - 483397 + | hypothetical protein SYO3AOP1_0471 483446 - 483817 + | hypothetical protein SYO3AOP1_0472 483840 - 486059 + | Nitric-oxide reductase TERM 309 486088 - 486116 + T 100 -9.6 -5.10601 | gap 1, opp_overlap 486090 TAAAAAGTCTCATAT TATCCCCCCTGGC TTAT GCC-GAGGGGATA TTTTTATAATTTTAT TERM 310 486114 - 486090 - T 77 -10 -2.64375 | gap 1, opp_overlap 486088 AAAAGTCTCATATTA TCCCCCCTGGC TTAT GCC-GAGGGGA TATTTTTATAATTTT SYO3AOP1_0473 487449 - 486457 - | aminodeoxychorismate lyase SYO3AOP1_0474 487861 - 487424 - | Holliday junction resolvase YqgF TERM 311 487495 - 487509 + gr 82 -2.8 -6.07374 | overlap 487497 GAAGTATAAAAACTG CAGACA AGC TGTCTA TTTTTTCTTTTTTGT TERM 312 487497 - 487507 + gr 71 -5.4 -4.6155 | overlap 487495 AGTATAAAAACTGCA GACA AGC TGTC TATTTTTTCTTTTTT SYO3AOP1_0475 488049 - 487858 - | hypothetical protein SYO3AOP1_0476 489361 - 488066 - | homoaconitate hydratase family protein SYO3AOP1_0477 490836 - 489961 - | 5,10-methylenetetrahydrofolate reductase TERM 313 490472 - 490488 + g 85 -8.1 -4.62471 | GCATGTTTACATCCA TCAGATA GAA TATCTGA TTTTTCAAAATTAAG TERM 314 490735 - 490751 + g 81 -4.5 -5.4111 | overlap 490737 CGGCTGTAAGTTTGA TATTGTT TCA AACAATG TTTTTTCTGCTTCTT SYO3AOP1_0478 491718 - 490846 - | transcriptional regulator, LysR family TERM 315 491648 - 491660 + g 76 -6.3 -4.70659 | AAAAGCATCTGTGCA GCTTT TGA AAAGC TTTTTAAGTCTGCAA SYO3AOP1_0479 492832 - 491705 - | 1-deoxy-D-xylulose 5-phosphate reductoisomerase TERM 316 492268 - 492282 + g 74 -8.6 -3.35358 | TTTTCTTACCCATAC TCCATC TTG GATGGA TTAATGCTTGTTTAA SYO3AOP1_0480 493399 - 492836 - | glutaredoxin-like domain protein SYO3AOP1_0481 494587 - 494294 - | hypothetical protein SYO3AOP1_0482 494963 - 494577 - | putative transcriptional regulator, ModE family SYO3AOP1_0483 495765 - 494971 - | peptidase A24A domain protein SYO3AOP1_0484 496268 - 495768 - | hypothetical protein SYO3AOP1_0485 496569 - 496243 - | hypothetical protein SYO3AOP1_0486 496632 - 497075 + | transcriptional regulator, TraR/DksA family TERM 317 497103 - 497093 - g 70 -4 -5.09895 | GAGTTATGGAAAAAA TCTT TAA AAGA ACTTTCAGACCTTGT SYO3AOP1_0487 497075 - 498532 + | glutamyl-tRNA(Gln) amidotransferase, A subunit SYO3AOP1_0488 498542 - 499594 + | ATPase-like protein SYO3AOP1_0489 499581 - 500186 + | hypothetical protein TERM 318 500562 - 500547 - g 85 -9 -4.03204 | CAGGAAAGTTAGAAA TCAGGG CATA CCCTGA AAGAAATTTACACGC TERM 319 501005 - 501019 + G 71 -8.6 -2.9294 | ATCTCTGATGTTGTA GGTCTT GGA AAGACC TATATGACTGCTATG TERM 320 501425 - 501411 - g 72 -7.2 -3.95073 | TTTTAGATTTAGAAA GCTTTT TTA AAAAGC TTGAAGATAGGCTAA TERM 321 502557 - 502535 - g 71 -5.6 -4.61147 | opp_overlap 502551 GAAGACCAGATAAAA TTAAAGCAGA TAG CCCGCTCTAA GGTAGAAGCTTTCTT SYO3AOP1_0490 500183 - 503341 + | helicase domain protein TERM 322 506793 - 506781 - g 79 -4.9 -5.1356 | overlap 506775 GTTCAGGAAGAAAAA TTTTC TGG GAAAA TAACTGAAAAGGAAG SYO3AOP1_0491 503343 - 506879 + | hypothetical protein SYO3AOP1_0492 507906 - 506968 - | hypothetical protein SYO3AOP1_0493 509066 - 507918 - | metallophosphoesterase SYO3AOP1_0494 509272 - 509066 - | hypothetical protein TERM 323 509238 - 509213 - G 77 -9.9 -2.72324 | overlap 509212 509219 GCCATTTAAATCAAG CAATAATCCTG CAAT CAAGATTATTG ACATCATAATTCTTT SYO3AOP1_0495 510168 - 509284 - | lipid A biosynthesis acyltransferase TERM 324 509725 - 509735 + g 75 -2.6 -5.56112 | TCTGATTTTTGTTAT TAAA TCA TTTA TTTTTTGATTTTTCT SYO3AOP1_0496 510589 - 510161 - | NUDIX hydrolase SYO3AOP1_0497 512241 - 510778 - | anion transporter TERM 325 511878 - 511896 + g 74 -6.8 -4.2558 | opp_overlap 511880 GTACAAGCCTAAACG GACTTTTT AAA AAGAAGTC TTTTGATAAAAAGTA SYO3AOP1_0498 513556 - 512231 - | Homoserine dehydrogenase TERM 326 512507 - 512521 + g 72 -5.8 -4.38712 | TACGTAGTATCTTGT GTAAAA ATC TTTTAC TTTTGTAAGGGTCAA TERM 327 513560 - 513572 + H 86 -4.1 -5.75599 | overlap 513554 TATCTTTTTCAACGG CTAAC CTC GTTGG TTTTTTTGTGGTTTA TERM 328 514210 - 514189 - g 71 -5.3 -4.65895 | overlap 514190 TGGTGTAGCTAAAAA CTTTTCTAA CTTT TTAGAAAAA GGTGCTGAAGCTGAT SYO3AOP1_0499 513893 - 514549 + | ThiJ/PfpI domain protein TERM 329 515111 - 515099 - g 74 -7.7 -3.9467 | overlap 515086 AAGCAGATATAACAA TAGCC TTT GGCTA TCCAAAAATCTGCCA SYO3AOP1_0500 514546 - 516120 + | carbohydrate kinase, YjeF related protein SYO3AOP1_0501 516292 - 516741 + | CMP/dCMP deaminase zinc-binding SYO3AOP1_0502 517320 - 516946 - | hypothetical protein TERM 330 517649 - 517665 + r 71 -5.3 -4.57073 | ATGCAAAAGGATAGT TTATTAA ATC TTAATAA TTTTTAGCAGCACTC SYO3AOP1_0503 518254 - 517757 - | hypothetical protein SYO3AOP1_0504 518766 - 518302 - | Domain of unknown function DUF1791 SYO3AOP1_0505 519710 - 518778 - | beta-lactamase domain protein TERM 331 519986 - 519997 + r 74 -3 -5.47431 | AAATAGCGTCCTTCA TCAA TACT TTGA TTTTTTGTATATTCC TERM 332 520204 - 520219 + r 70 -4 -5.06451 | overlap 520203 TCTCTCATAAGCTCC TATGGC AATA GCTATA TTTTTTCCACTAATA SYO3AOP1_0507 521120 - 520842 - | hypothetical protein SYO3AOP1_0508 522093 - 521098 - | hypothetical protein TERM 333 522106 - 522116 + r 70 -4 -5.00467 | CATGTCTAACCCCCT CTAA GTT TTAG TTTTATTATTGTTGC SYO3AOP1_0509 522619 - 522122 - | Domain of unknown function DUF1791 SYO3AOP1_0510 524040 - 522736 - | phosphate-selective porin O and P TERM 334 523424 - 523439 + g 74 -4 -5.22794 | overlap 523425 ACTCCAAAGTTATAG TTAAGC CCTA GCTTAG TTTTTTCATCATTGT SYO3AOP1_0511 524867 - 524223 - | protein of unknown function DUF302 SYO3AOP1_0512 525040 - 524930 - | hypothetical protein TERM 335 524979 - 524967 - G 73 -7.7 -3.71114 | overlap 524965 AACTCAATAGAAATA GGAGA TTC TCTCC TTCCGGCCTCAGGAT SYO3AOP1_0513 526920 - 525187 - | 5'-Nucleotidase domain protein SYO3AOP1_0514 527747 - 526941 - | hypothetical protein TERM 336 527443 - 527463 + g 78 -6.9 -4.37737 | overlap 527444 CACATCTGAATTCTT TGCTGTAGT GAT ATTACAGCG TTTAATTTTTCGTTG TERM 337 527444 - 527462 + g 71 -8.2 -3.21015 | overlap 527443 ACATCTGAATTCTTT GCTGTAGT GAT ATTACAGC GTTTAATTTTTCGTT TERM 338 527804 - 527782 - R 82 -6.2 -5.10029 | overlap 527784 AGGAATTTTAAAAAA GAGAGGGCTA AAA TAGCCCTCAG CCGAGATTATCCTAC TERM 339 527802 - 527784 - R 100 -13.2 -4.17355 | overlap 527782 GAATTTTAAAAAAGA GAGGGCTA AAA TAGCCCTC AGCCGAGATTATCCT SYO3AOP1_0515 528140 - 527811 - | Sulphur oxidation protein SoxZ SYO3AOP1_0516 528632 - 528165 - | sulfur oxidation protein SoxY SYO3AOP1_0517 529090 - 528644 - | Highly conserved protein containing a thioredoxin domain SYO3AOP1_0518 529645 - 529094 - | sulfur oxidation protein SoxX TERM 340 529736 - 529751 + r 71 -3.2 -5.24531 | opp_overlap 529736 529745 TATGACAAAAACCTA TGTCCC AAAT GGAACA TTTTTTGTCCCAAAT SYO3AOP1_0519 531052 - 529775 - | FAD-dependent pyridine nucleotide-disulphide oxidoreductase TERM 341 530830 - 530813 - GR 81 -4.2 -5.69793 | opp_overlap 530813 ACAGGAAACAAAAAA CTCATT TTTTTC AATGAG TAATATATCCACATC SYO3AOP1_0520 531743 - 531027 - | Rieske (2Fe-2S) domain protein TERM 342 531409 - 531427 + gr 83 -6 -5.2853 | TGGTGAGGACATATT GCACTGTA AGC TACAATGC TTTTATTTTTACCTA TERM 343 531801 - 531784 - R 100 -9.1 -6.09196 | opp_overlap 531784 531784 TGTAAAATAAAAAAA GGGGGAT ATCA ACCCCCC CTTATTAGATGCATA SYO3AOP1_0521 533155 - 531848 - | FAD-dependent pyridine nucleotide-disulphide oxidoreductase SYO3AOP1_0522 533752 - 533357 - | hypothetical protein SYO3AOP1_0523 534190 - 534963 + | ribonuclease PH SYO3AOP1_0524 534977 - 536275 + | Adenylosuccinate synthase SYO3AOP1_0525 536295 - 536564 + | hypothetical protein SYO3AOP1_0526 538175 - 536571 - | glycosyl transferase family 39 TERM 344 539363 - 539337 - g 70 -3.8 -5.07275 | opp_overlap 539345, overlap 539339 539345 GTATACAGACAAAAA GATGAAAAGTTT ATA AAACTTTTAAAC GCAATAAGAAATAAA SYO3AOP1_0527 538770 - 540323 + | AAA ATPase SYO3AOP1_0528 540320 - 540820 + | Shikimate kinase SYO3AOP1_0529 540824 - 541849 + | UDP-glucose 4-epimerase SYO3AOP1_0530 541851 - 542336 + | hypothetical protein TERM 345 542372 - 542326 - f 95 -9 -5.00923 | overlap 542329 AAATACTAAACAAAA TCATTCCTTAAAAAACCATGTT TTT AACAAAGTTTTTAAAGGAATTA AACTTAAAAATACTA TERM 346 542369 - 542329 - f 83 -10.7 -3.34291 | overlap 542326 TACTAAACAAAATCA TTCCTTAAAAAACCATGTT TTT AACAAAGTTTTTAAAGGAA TTAAACTTAAAAATA TERM 347 542555 - 542573 + G 75 -2.4 -5.54907 | AATTATAAGCTTTTT TGCAATTG TTC TAATAGCA TTTTTCTTTTATAAA SYO3AOP1_0531 542343 - 543623 + | hypothetical protein TERM 348 544256 - 544272 + G 79 -3.6 -5.66926 | overlap 544257 ATTTACTTTGAATTG GCCCAG GTCTA CTGGGA TTTTGTTTTTTTTCA TERM 349 544257 - 544271 + G 74 -7.1 -3.96495 | overlap 544256 TTTACTTTGAATTGG CCCAG GTCTA CTGGG ATTTTGTTTTTTTTC SYO3AOP1_0532 543620 - 544609 + | hypothetical protein TERM 350 545846 - 545863 + G 70 -8.3 -3.16668 | TTCTGGAAGGTTTTG CTGCCGG TCTT CCGGCCG TTGCTACAGATGTTG SYO3AOP1_0533 544606 - 546120 + | glycosyl transferase group 1 SYO3AOP1_0534 546120 - 547490 + | putative transmembrane protein TERM 351 547670 - 547657 - gf 74 -5.3 -4.86216 | ATAAAAAATAAGAAA GCAAA ACTT TTTGC GTATGTATCCGTAGG SYO3AOP1_0535 547456 - 550182 + | hypothetical protein TERM 352 551116 - 551104 - g 75 -2.7 -5.52909 | TAACATGGAAAAAAA TCCTT TAA AAAGA AAAGAATATTTCAAA SYO3AOP1_0536 550157 - 551320 + | hypothetical protein TERM 353 552050 - 552037 - g 77 -3.9 -5.50499 | CTATATGCAAAAAAA GATTT GAAA AAATC CTTAGAAGTTTTAAA SYO3AOP1_0537 551317 - 554145 + | hypothetical protein SYO3AOP1_0538 554509 - 555420 + | Radical SAM domain protein SYO3AOP1_0539 557220 - 555769 - | glutamate synthase (NADPH), homotetrameric SYO3AOP1_0540 558144 - 557230 - | ornithine carbamoyltransferase TERM 354 558312 - 558355 + r 100 -11 -4.287 | overlap 558313 AGGCAACTGTTAACT TTGGATGTGTACGGGCGATT CATG AATCGCCCCTACTCTTCCAC TTTTCCACTTTATTT TERM 355 558313 - 558354 + r 100 -14.5 -3.15593 | overlap 558312 GGCAACTGTTAACTT TGGATGTGTACGGGCGATT CATG AATCGCCCCTACTCTTCCA CTTTTCCACTTTATT SYO3AOP1_0541 559409 - 558489 - | aspartate carbamoyltransferase SYO3AOP1_0542 559985 - 559419 - | SNARE associated Golgi protein TERM 356 560029 - 560055 + r 79 -10.2 -2.82834 | opp_overlap 560047, overlap 560031 CGGATTTGAACCGCC GACCTCCAGATT AGG AATCTGGGGCTC TGTCCTACTGAGCTA SYO3AOP1_0543 561379 - 560060 - | peptidase M16 domain protein TERM 357 560796 - 560784 - G 79 -4.9 -5.31855 | overlap 560778 TAGTAAGAATAAAAA TAGTT TCT AACTA ATTCCGGTGTATAGT SYO3AOP1_0544 562259 - 561372 - | import inner membrane translocase subunit Tim44 TERM 358 563028 - 563001 - g 79 -8.5 -3.93367 | GCCGCTAACAAAAGA GCAGGTCTTAG AAAATG CCAAGACCTAC AAAGAGCAAGTATTT SYO3AOP1_0545 562717 - 563919 + | tyrosyl-tRNA synthetase SYO3AOP1_0546 564253 - 563906 - | protein of unknown function UPF0102 TERM 359 563964 - 563943 - G 77 -10.2 -2.52017 | overlap 563942 563941 TCTAAATGGAAAATT TGGTTGCC TTTAAG GGCAACCA CGTCAAACCTAAAAT SYO3AOP1_0547 565118 - 564246 - | SurA domain protein TERM 360 565093 - 565105 + g 80 -6.3 -4.8487 | opp_overlap 565092 565093 AAAAGAATTAAAAAC GCATT CAA AATGC TTGTTTTTTTCATAA SYO3AOP1_0548 565642 - 565130 - | protein of unknown function DUF29 TERM 361 565540 - 565550 + g 74 -4 -5.2189 | CCCAGTCCACTAAGT CAAA TTC TTTG TTTTTTAGTAATTCC SYO3AOP1_0549 567113 - 565629 - | UDP-N-acetylglucosamine pyrophosphorylase TERM 362 566510 - 566523 + g 70 -4.5 -4.74406 | AAAATAAGTATATTC CGGAG TTTA CTTCG TTTATATTTTTTTCT TERM 363 566760 - 566772 + g 85 -9.1 -4.05446 | opp_overlap 566759, overlap 566750 TTCTCCTCCAATGAG CGGAG TGT CTCCG TTTATGATTAAAACA SYO3AOP1_0550 567903 - 567271 - | ATP phosphoribosyltransferase SYO3AOP1_0551 568149 - 567904 - | cell division topological specificity factor MinE SYO3AOP1_0552 568947 - 568165 - | septum site-determining protein MinD TERM 364 568310 - 568326 + g 74 -3.8 -5.1356 | ATCGGTTCTCCCCTG TTAGTA AAATC TACTAA TTTTTCTTCGTCCGG SYO3AOP1_0553 569570 - 568962 - | septum site-determining protein MinC TERM 365 569261 - 569272 + g 73 -4.4 -5.06089 | ACTCTACTTTTTGAC CACT TCTT AGTG TTTTGTTTATAATTT SYO3AOP1_0554 569654 - 570913 + | diaminopimelate decarboxylase SYO3AOP1_0555 570910 - 572184 + | phosphoribosylamine/glycine ligase SYO3AOP1_0556 573834 - 572359 - | UbiD family decarboxylase SYO3AOP1_0557 574468 - 573824 - | protein of unknown function DUF502 SYO3AOP1_0558 575316 - 574465 - | protein of unknown function DUF114 SYO3AOP1_0559 575992 - 575309 - | dUTPase TERM 366 576105 - 576132 + r 100 -12.8 -3.17553 | overlap 576103 GACAACTTTACTTTC GTAAGGGCGATT CATG AATCGCCCCTAC TCTTCCGCTTTTTCA SYO3AOP1_0560 577760 - 576219 - | glycoside hydrolase family 57 TERM 367 577202 - 577218 + g 79 -6.6 -4.56775 | overlap 577212 ATGCACATTCTGCAA GCCAAA TGCCT TTTGGC TTTTTCCCAAAAAAT TERM 368 577751 - 577737 - G 74 -8.6 -3.18199 | CAAGTGGGAATGTAA TACTGG CAT CCAGTA GCCTTTCATTAAGTC TERM 369 578017 - 578033 + r 86 -9.4 -4.11404 | opp_overlap 578017 TTTTCATTAATGAAA GGGAGG ACAAG CCTCCC TTTATATAGTGTGAA TERM 370 578033 - 578017 - R 83 -9.4 -3.95584 | opp_overlap 578017 TTTTCATTAATGAAA GGGAGG ACAAG CCTCCC TTTATATAGTGTGAA SYO3AOP1_0561 578289 - 578050 - | hypothetical protein TERM 371 578078 - 578094 + g 73 -7.9 -3.66018 | GCTGGTTTTTGTTCG CCTGCTG GTG CAGCTGG TTGTTCAGCTGGTGC TERM 372 578159 - 578169 + g 71 -6.8 -3.96068 | GGAGCTGGAGCTGGT GCTG GTG CAGC TTGTTGTTCAGCTGG SYO3AOP1_0564 580387 - 581022 + | GrpE protein TERM 373 581094 - 581082 - g 86 -4.1 -5.80248 | GAAGAGATAAAAAAA GCCTT CAG AAAGC AAGCCAAAAAGTTCC TERM 374 581822 - 581812 - g 71 -5.4 -4.70659 | TTTTAGAGTTAAAAA TTCC AAA GGAA GAACAATTACCTTTA TERM 375 581858 - 581848 - g 71 -5.4 -4.66833 | CTTTAACTTTAAAAA TTCC AAA GGAA GGCTATATAGACAAA SYO3AOP1_0565 581022 - 581912 + | heat shock protein DnaJ domain protein SYO3AOP1_0566 582519 - 582193 - | putative ferredoxin 2Fe-2S protein SYO3AOP1_0567 583691 - 582621 - | DNA protecting protein DprA TERM 376 584074 - 584048 - g 88 -6.6 -5.13016 | AACCAAAAGTAAAAA GGGAACATGTAA GAG TAAAATGTTCCC AAAAAAATCCAATTC TERM 377 584096 - 584082 - g 76 -3.6 -5.40474 | ATGTTCCCAAAAAAA TCCAAT TCT ATTAGA GATAGATGATGACAT SYO3AOP1_0568 583750 - 584400 + | type IV pilus assembly PilZ SYO3AOP1_0569 585059 - 584397 - | Radical SAM domain protein TERM 378 584525 - 584535 + gT 74 -5.4 -4.82667 | opp_overlap 584525 TTTCCGGTTGAAGTA CGAT AAC ATCG TTTTTAATATACTCC TERM 379 584682 - 584697 + gT 70 -6.2 -4.19276 | opp_overlap 584681 ACATGTGATATAGAT CTTAGA CTTA TCTAAG TTTTCAAAGTTTTGA SYO3AOP1_0570 587817 - 585031 - | translation initiation factor IF-2 TERM 380 586373 - 586386 + gr 71 -3.1 -5.18371 | overlap 586374 AAGAATGTTATTTCT TTTCC GTTT GGAAG TTTTATTTTATAAGC SYO3AOP1_0571 588126 - 587830 - | ribosomal protein L7Ae/L30e/S12e/Gadd45 TERM 381 587959 - 587945 - G 73 -4.4 -5.02074 | opp_overlap 587929 587935 587945 TTATTTTTGAAAAAA TAAATT TCA AATTTA TTTAACTTTAATATA SYO3AOP1_0572 589241 - 588126 - | NusA antitermination factor TERM 382 588995 - 589012 + g 70 -4.2 -4.98352 | TTGGGTCGTAATTTT TTGCTT CTTCTA AAGCAA TTTCTTTTGTTTCAT SYO3AOP1_0573 589699 - 589256 - | protein of unknown function DUF150 SYO3AOP1_0574 590342 - 589788 - | ribosome recycling factor SYO3AOP1_0575 591065 - 590355 - | uridylate kinase SYO3AOP1_0576 591662 - 591069 - | translation elongation factor Ts SYO3AOP1_0577 592546 - 591662 - | ribosomal protein S2 TERM 383 592772 - 592789 + r 72 -8.5 -3.10192 | overlap 592767 ATCCTATTCTGTAAT GGCAATT CATG AATTGCC TCTACTTTCGTTTTC SYO3AOP1_0578 593706 - 592966 - | Carbonate dehydratase TERM 384 593186 - 593198 + g 82 -4.9 -5.4111 | opp_overlap 593186 TTGTTTAAATTTAAA TTCTT ATC AAGAA TTTTTTCTCCTTCTT SYO3AOP1_0579 593770 - 594984 + | protein of unknown function DUF208 SYO3AOP1_0580 595552 - 595073 - | Abortive infection protein SYO3AOP1_0581 596973 - 595699 - | peptidase M48 Ste24p TERM 385 595988 - 595998 + g 70 -4 -5.10077 | opp_overlap 595988, overlap 595973 595989 TATGCTTTTAAAGCA TCTT CAT AAGA TTTTTTGAAGTCTTT TERM 386 597130 - 597175 + r 81 -9.9 -3.06183 | opp_overlap 597138, overlap 597114 597135 597138 CCTGAGGACTTTAGT CCGAAGGATCTCCTCTTTTAA AAAA TAAAAAAAGGAGATTCTTCGC TTCGCTCAGAATGAC SYO3AOP1_0582 598493 - 597264 - | molybdenum cofactor synthesis domain protein TERM 387 597492 - 597516 + g 74 -6.5 -4.35116 | overlap 597495 ATCTTCTGTTAAGAT TCCTGAGAATA TCT TATTTTCTGGA TTTTGATATCCCATC SYO3AOP1_0583 600088 - 598496 - | MGS domain protein SYO3AOP1_0584 600648 - 600085 - | protein of unknown function UPF0227 SYO3AOP1_0585 600967 - 601626 + | glycerophosphoryl diester phosphodiesterase TERM 388 601828 - 601812 - T 93 -5 -5.93252 | opp_overlap 601813, overlap 601813 GTGAAAAACAAAAAA GCCCCC GTTAA GGGGGT TTCATATATTTATTA TERM 389 601813 - 601827 + T 82 -8.5 -3.99819 | opp_overlap 601812 601813 TGAAAAACAAAAAAG CCCCC GTTAA GGGGG TTTCATATATTTATT TERM 390 601827 - 601813 - T 82 -8.5 -4.13511 | opp_overlap 601813, overlap 601812 TGAAAAACAAAAAAG CCCCC GTTAA GGGGG TTTCATATATTTATT SYO3AOP1_0586 603493 - 601859 - | chaperonin GroEL TERM 391 602616 - 602635 + g 80 -5.8 -5.00196 | gap 1, opp_overlap 602616 CCGCCTGTTAAGATA GCAATGTCT TGA AG-CATTGC TTTTCTTCTTTCGCC TERM 392 603042 - 603067 + g 76 -6.3 -4.65916 | gap 1 GGGTCGTTGTTTGCA GAGATTGTAGCA ACT TGTT-CAATCTC TTTTCTTCCAGTAAC SYO3AOP1_0587 603810 - 603514 - | chaperonin Cpn10 TERM 393 603794 - 603780 - G 79 -8.6 -3.78934 | opp_overlap 603780 603779 CTCTTTTGATAACAA CTCTGT CAT ACAGAG GTTTTAACTTTGCCA TERM 394 603780 - 603794 + g 74 -8.6 -3.20832 | opp_overlap 603780, overlap 603779 CTCTTTTGATAACAA CTCTGT CAT ACAGAG GTTTTAACTTTGCCA TERM 395 604435 - 604415 - H 86 -4.1 -5.82388 | overlap 604417 AAACCTTAAAAAAAA GCTAAAAAT AAA ATTTTTACC AAGATATTAATTTTT TERM 396 604868 - 604854 - g 72 -7.1 -3.79044 | opp_overlap 604854 604853 AAAATAAACGGTAAA GCCGT AGAAA ACGGC GTTCTTGTTGTTAAA TERM 397 604944 - 604928 - g 74 -2.9 -5.37593 | overlap 604931 TGTGAAAGGAAAAAA GATTACC CTT GGCAGTC CTATCTGTATGAGTA SYO3AOP1_0588 604542 - 605351 + | phosphonate ABC transporter, periplasmic phosphonate-binding protein TERM 398 606137 - 606147 + G 74 -4 -5.16133 | opp_overlap 606137 GATGAGATAAATAAG CTAA CGT TTAG TTTTTATATTATGAT SYO3AOP1_0589 605348 - 606910 + | integral membrane sensor signal transduction histidine kinase TERM 399 607712 - 607693 - g 71 -3 -5.23396 | gap 1 AAGAATTAATAAAAA TGAGATGTA GAG TA-ATCTCA GCAACCAACAGAAAC TERM 400 607836 - 607824 - g 70 -4.1 -5.05113 | CTTAGAGAAAGAAAA GAAGA TAT TCCTC TCCTTGTCAAGAAAT SYO3AOP1_0590 606903 - 608225 + | two component, sigma54 specific, transcriptional regulator, Fis family SYO3AOP1_0591 609649 - 608333 - | MATE efflux family protein SYO3AOP1_0592 610188 - 609643 - | Methyltransferase type 12 TERM 401 609757 - 609745 - G 84 -6.3 -5.19879 | opp_overlap 609743 609745 TTCCAAAGATAAAAA GCTAT GTA ATAGC TCATTTTTTCTAAGT SYO3AOP1_0593 610722 - 610189 - | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family SYO3AOP1_0594 611123 - 612193 + | peptidase M20 SYO3AOP1_0595 612725 - 612171 - | CDP-alcohol phosphatidyltransferase SYO3AOP1_0596 613167 - 612712 - | rfaE bifunctional protein TERM 402 613050 - 613040 - G 74 -5.4 -4.84492 | opp_overlap 613035 613040, overlap 613035 CCAACGACAAGAAAA TCTC CAA GAGA TTTTGCTTTCTCTAA TERM 403 613040 - 613050 + g 71 -5.4 -4.65153 | opp_overlap 613040 613035, overlap 613035 CCAACGACAAGAAAA TCTC CAA GAGA TTTTGCTTTCTCTAA SYO3AOP1_0597 614361 - 613498 - | Sporulation domain protein TERM 404 614187 - 614207 + g 72 -3.3 -5.31456 | overlap 614190 AGTTTGTTGCTACTT TTATATCTG GTT CAGATATTG TTTTTTCTGACTTAG TERM 405 614190 - 614204 + g 80 -7.2 -4.73105 | overlap 614187 TTGTTGCTACTTTTA TATCTG GTT CAGATA TTGTTTTTTCTGACT SYO3AOP1_0598 616022 - 614361 - | arginyl-tRNA synthetase TERM 406 614931 - 614921 - G 71 -5.4 -4.72272 | CGCCGTTATTAAAAA GCTT AAC AAGC TGAATAAACAGTACA TERM 407 615137 - 615154 + g 71 -5.6 -4.59773 | TTACTCTGTCTTTTT CATCTC CATAGA GAGATG TTTTTAGCCATAAAG TERM 408 615778 - 615767 - G 74 -3 -5.40464 | CATCAGAAATAAAAA GATT TATA AATC CACCGCCTGCTACTT SYO3AOP1_0599 616338 - 616006 - | hypothetical protein SYO3AOP1_0600 617104 - 616508 - | hypothetical protein TERM 409 617048 - 617059 + g 70 -4.4 -4.78848 | AATAGTTAAATCTTT TTCG CCTA CGAA TTTTCTATTTAAAAC SYO3AOP1_0601 618867 - 617104 - | DNA-directed DNA polymerase SYO3AOP1_0602 619442 - 618864 - | isochorismatase hydrolase SYO3AOP1_0603 619795 - 619439 - | transcriptional regulator, TraR/DksA family TERM 410 619945 - 619975 + H 86 -9.9 -3.74762 | gap 1, overlap 619950 AAAATGACGGGTGAT GTGTAGGGGCGATT CATG AATCGCCTCTA-AC TTATTCCTCACTCTT TERM 411 619950 - 619971 + H 82 -10.9 -2.67428 | overlap 619945 GACGGGTGATGTGTA GGGGCGATT CATG AATCGCCTC TAACTTATTCCTCAC SYO3AOP1_0604 620071 - 621072 + | biotin synthase TERM 412 621753 - 621781 + T 73 -7.6 -3.5771 | ATGTTTTGCTATGTT TTCTTGATGTAA GTTCA TTACCTCAAGAA TTTGGAAAACTTTTT SYO3AOP1_0606 622638 - 622153 - | ferredoxin thioredoxin reductase beta chain SYO3AOP1_0607 623005 - 623820 + | hypothetical protein SYO3AOP1_0608 623842 - 624426 + | NAD(P)H dehydrogenase (quinone) SYO3AOP1_0609 626110 - 624683 - | D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase SYO3AOP1_0610 627101 - 626361 - | aminotransferase class IV TERM 413 627431 - 627418 - g 81 -3.9 -5.59534 | AATTAGAAGAAAAAA TTCAA AGGA TTGAA AAAGAAAAAAGGGGG SYO3AOP1_0611 627165 - 627452 + | hypothetical protein TERM 414 627457 - 627442 - T 100 -8.2 -5.93252 | opp_overlap 627440 627442 TTGAAAAAGAAAAAA GGGGGC AGTA ACCCCC TCTTCGATTATTGAC SYO3AOP1_0612 628499 - 627465 - | thiamine pyrophosphate protein domain protein TPP-binding TERM 415 627847 - 627863 + g 70 -4.5 -4.91084 | opp_overlap 627847, overlap 627839 627838 627842 TTTGGACCTTTAAAA GTTAAAG CTT TTTTAAC TTTTCTTGTTAAATC SYO3AOP1_0613 629692 - 628502 - | pyruvate flavodoxin/ferredoxin oxidoreductase domain protein SYO3AOP1_0614 630016 - 629711 - | pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit SYO3AOP1_0615 630636 - 630040 - | pyruvate/ketoisovalerate oxidoreductase, gamma subunit TERM 416 630932 - 630949 + H 71 -8.5 -2.85446 | CTTATTTACTGTATG GGCAATT CATG AATTGCC TCTACTCACTTTCTG TERM 417 631040 - 631017 - H 71 -8.2 -3.23692 | CAGGATGACGAGGAA CTTCCGAATG ATGT CATTCTGAAG CCGTGCGAAGAATCT TERM 418 632510 - 632494 - g 79 -7.3 -4.52703 | GAAATTATCACAAAA GAAGGAC ATA ATCCTTC AAGAGATTGGCTTAA SYO3AOP1_0616 631144 - 633285 + | (p)ppGpp synthetase I, SpoT/RelA TERM 419 633320 - 633301 - T 74 -7.1 -4.00212 | opp_overlap 633301 AAATCAAAAAATCAA GGCAGGC ACGAAG ACCTGCC TATATAGATATGTTA SYO3AOP1_0617 634238 - 633333 - | pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit SYO3AOP1_0618 636052 - 634265 - | pyruvate flavodoxin/ferredoxin oxidoreductase domain protein SYO3AOP1_0619 637137 - 636256 - | succinyl-CoA synthetase, alpha subunit SYO3AOP1_0620 638317 - 637148 - | succinyl-CoA synthetase, beta subunit SYO3AOP1_0621 639220 - 638342 - | hypothetical protein SYO3AOP1_0622 640072 - 639509 - | hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit SYO3AOP1_0623 640928 - 640083 - | hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit TERM 420 640725 - 640710 - G 71 -3.2 -5.25803 | opp_overlap 640710 640719, overlap 640719 AACTTCCACAAAAAA TACAGG ATAG CCAGTA TCTTGACAATAAGCT TERM 421 640804 - 640814 + g 77 -3.2 -5.52079 | overlap 640792 ATTTCTCTTCCAAGT GGAG ATT CTTC TTTTTCTTTTGCTAT SYO3AOP1_0624 641956 - 640958 - | Lactate/malate dehydrogenase TERM 422 642020 - 642034 + r 100 -7.2 -5.44119 | overlap 642027 642028 TTTGAATTTTGTCAA TCAAAC GGT GTTTGA TTTTTTTAAAATCAA SYO3AOP1_0625 642732 - 642361 - | hypothetical protein SYO3AOP1_0626 643888 - 642734 - | protein of unknown function DUF185 TERM 423 642782 - 642797 + g 72 -4.7 -4.84582 | CGGAAGGTTTTTAAG TCCAG CAATGT CTGGA TTTTGTATATTTTTT TERM 424 642809 - 642825 + g 74 -6.7 -4.29656 | TGGATTTTGTATATT TTTTGAT TGA ATCAAAA TTTTAAACTTTTCTC TERM 425 643827 - 643792 - G 80 -7.6 -4.31433 | opp_overlap 643792, overlap 643817 GATTTGGATAATAAA GAGCCATCTCCATAAA ATCT TTAAAGGAGATAGCCC CTTCCTGCTGAATTT SYO3AOP1_0627 644581 - 643889 - | 4Fe-4S ferredoxin iron-sulfur binding domain protein SYO3AOP1_0628 646324 - 644594 - | NADH-ubiquinone oxidoreductase chain 49kDa TERM 426 646603 - 646573 - R 75 -2.4 -5.62552 | overlap 646575 646577 AAAAAAATCAAAAAA GAGATCCTTCGGAC TTT GTCCTCAGGATGAC AAGGAAAGGCAAATT SYO3AOP1_0629 647287 - 646667 - | hypothetical protein SYO3AOP1_0630 647977 - 647288 - | DNA repair protein RadC TERM 427 647904 - 647892 - G 76 -3.3 -5.41941 | opp_overlap 647893 647894, overlap 647886 647894 GAAAGGAAAGAAAAA CCCCC TTT AAGGG CTTTCTCCCTTGGAA SYO3AOP1_0631 648453 - 647974 - | hypothetical protein TERM 428 648351 - 648339 - G 76 -6.3 -4.67353 | TTATCCATTCAAAAA TTCCA TCA TGGAA AACGACGCCGCATCT TERM 429 649761 - 649749 - g 70 -4.1 -4.94902 | overlap 649750 GAAGGATTAGAAAAA CGCTT AGA AAGCA TAAAGGATCTAACGC TERM 430 649902 - 649930 + G 71 -8.8 -2.87354 | opp_overlap 649900 649902, overlap 649899 649927 AAGAAAAACGGAATA CCGGTAGGACCT GGCAG AGGTTCAGCCGG TGGTTCATTGGTTGC TERM 431 651314 - 651297 - g 74 -4.2 -5.24796 | opp_overlap 651297 GCCATAGAAGAAAAA TCCAAA ATTAGA TTTGGA TTATCAAGAATCAAG TERM 432 651951 - 651927 - g 74 -5.2 -4.84359 | gap 1, opp_overlap 651944 GCATTTCCAGAAAAA CTTGAAAACAA AGAA TTGTTT-CAAG ATGACAATATAGTCA SYO3AOP1_0632 648798 - 652295 + | DNA polymerase III, alpha subunit TERM 433 652574 - 652561 - f 75 -2.4 -5.55695 | GAAGAAGACAAAAAA GAAG GAGATT CTTC GCTATCGCTCAGAAT SYO3AOP1_0634 652927 - 654165 + | transposase mutator type SYO3AOP1_0635 655129 - 656283 + | phosphoribosylaminoimidazole carboxylase, ATPase subunit SYO3AOP1_0636 656280 - 656792 + | phosphoribosylaminoimidazole carboxylase, catalytic subunit TERM 434 657123 - 657136 + G 71 -5.3 -4.63527 | TCCAAACGCCTTAGA GCTTT TAGG AAAGC TTTTTGGGATCATAA SYO3AOP1_0637 656812 - 657156 + | hypothetical protein TERM 435 657360 - 657345 - g 93 -6.2 -5.58522 | opp_overlap 657345, overlap 657339 GATATAAAACAAAAA GTTCTT GGGC AAGAAC TTATAAAAGGTCTTT SYO3AOP1_0638 657171 - 658505 + | signal recognition particle protein SYO3AOP1_0639 660526 - 658784 - | extracellular solute-binding protein family 5 TERM 436 659612 - 659629 + g 75 -2.7 -5.61824 | overlap 659615 TGTAGCCCCAAGGTT GTAGATT GTAT AATCTCC TTTTTTTGCATTTTC SYO3AOP1_0640 661218 - 660523 - | undecaprenyl diphosphate synthase SYO3AOP1_0641 661913 - 661215 - | tol-pal system protein YbgF TERM 437 662316 - 662286 - R 75 -2.4 -5.59502 | overlap 662288 662290 CAAAAAATCAAAAAA GAGATCCTTCGGCT TAC AGCCTCAGGATGAC ACGGAAAGGTAAGTT TERM 438 662667 - 662645 - R 100 -9.1 -5.65927 | overlap 662646 CATTTAAATAAAAAA GGACCCTCC TTCGC GGAGGGTCA ATGAGGGGGTTTGGG TERM 439 662666 - 662646 - R 100 -12.6 -3.9793 | overlap 662645 ATTTAAATAAAAAAG GACCCTCC TTCGC GGAGGGTC AATGAGGGGGTTTGG SYO3AOP1_0642 663577 - 662705 - | Polyferredoxin-like protein TERM 440 662946 - 662965 + g 74 -7.2 -4.07124 | opp_overlap 662946, overlap 662947 CAGTCTGTACAAGCA TCTACGTT AACT AACGTAGG TTTATATAAATGGTG TERM 441 662947 - 662964 + g 72 -8.5 -3.03792 | opp_overlap 662946, overlap 662946 AGTCTGTACAAGCAT CTACGTT AACT AACGTAG GTTTATATAAATGGT SYO3AOP1_0643 664281 - 663628 - | phosphoribosylglycinamide formyltransferase SYO3AOP1_0644 665316 - 664294 - | phosphoribosylformylglycinamidine cyclo-ligase SYO3AOP1_0645 665813 - 665331 - | phosphatidylglycerophosphatase A SYO3AOP1_0646 666085 - 666513 + | hypothetical protein SYO3AOP1_0647 666515 - 667342 + | nicotinate-nucleotide pyrophosphorylase SYO3AOP1_0648 667358 - 668434 + | 3-isopropylmalate dehydrogenase SYO3AOP1_0649 668628 - 668786 + | hypothetical protein SYO3AOP1_0650 668790 - 669566 + | hypothetical protein SYO3AOP1_0651 669568 - 669819 + | hypothetical protein TERM 442 670025 - 670041 + T 79 -5.1 -5.2696 | opp_overlap 670025 CTTGCCTAAAATCAA GCAGTAT TTA AAACTGC TTTTTTAACTTTTAA SYO3AOP1_0652 671916 - 670021 - | deoxyxylulose-5-phosphate synthase TERM 443 671022 - 671012 - G 71 -6.8 -4.09243 | GAGATTTTGTCAAAA GGAG ATA CTCC GTGGAATGTGGTTGG SYO3AOP1_0653 672292 - 672837 + | hypothetical protein TERM 444 672852 - 672862 + G 79 -2.6 -5.75342 | ATGTCAGGAAATGAT TTAA TCT TTAA TTTTTTTTCAGAAAA TERM 445 673415 - 673402 - g 75 -2.5 -5.54338 | GAATGAAAACAAAAA TAAAA GAAA TTTTA AAAGAATATTCATTT SYO3AOP1_0654 672837 - 673511 + | hypothetical protein SYO3AOP1_0655 673504 - 674319 + | hypothetical protein TERM 446 674359 - 674349 - g 74 -4 -5.17353 | overlap 674356 ACAGTTATTAAAAAA CAAA AGG TTTG AAGTAATCAAAGCAT SYO3AOP1_0656 674323 - 675813 + | hypothetical protein TERM 447 675893 - 675873 - g 73 -7.5 -3.66589 | AAGTAGAAATCATAA CTCCAACCA TCA TGGGCGGAG CAAATAGTGGAAAAT TERM 448 676616 - 676630 + G 79 -7.2 -4.49364 | ATTTTAAAAGTTGGT CAATCT TAC AGATTG TTTGTTATTGGCTTT SYO3AOP1_0657 675839 - 676735 + | CRISPR-associated RAMP protein, Cmr1 family SYO3AOP1_0658 676750 - 678459 + | CRISPR-associated protein, Crm2 family SYO3AOP1_0659 678461 - 679471 + | hypothetical protein SYO3AOP1_0660 679471 - 680247 + | CRISPR-associated RAMP protein, Cmr4 family SYO3AOP1_0661 680251 - 680664 + | CRISPR-associated protein, Cmr5 family SYO3AOP1_0662 680651 - 681484 + | CRISPR-associated RAMP protein, Cmr6 family SYO3AOP1_0663 681477 - 682481 + | hypothetical protein SYO3AOP1_0664 682571 - 682882 + | hypothetical protein TERM 449 683185 - 683166 - f 90 -12.2 -3.33815 | ACTCTTCTTAAGTAA GGGCAGTT CATG AACTGCCC CCCAACATCCATCAA TERM 450 683318 - 683294 - f 75 -9.5 -2.83964 | opp_overlap 683299 683301, overlap 683291 683299 683301 TATCATATAATATTA TAAAACAGCAA AAT TTGCTATTTTA TGATGAATAATAAAT SYO3AOP1_0665 683318 - 683800 + | Abortive infection protein SYO3AOP1_0666 683844 - 684602 + | CRISPR-associated protein Cas6 SYO3AOP1_0667 684703 - 685062 + | S23 ribosomal protein SYO3AOP1_0668 685074 - 686693 + | CRISPR-associated CXXC_CXXC protein Cst1 SYO3AOP1_0669 686690 - 687604 + | CRISPR-associated autoregulator, DevR family SYO3AOP1_0670 687629 - 688321 + | CRISPR-associated protein Cas5 family TERM 451 688640 - 688627 - g 74 -5.3 -4.88067 | overlap 688629 688631 ACTTATTCAGAAAAA TACAG TATG CTGTA GCATACCACCATGAC TERM 452 688646 - 688631 - g 73 -7.6 -3.61603 | overlap 688627 688629 ATTCAGAAAAATACA GTATGC TGTA GCATAC CACCATGACAGATAT TERM 453 690092 - 690082 - g 74 -4 -5.2112 | overlap 690083 AATACGATGAAAAAA TTCT TAC AGAA GAGATAAAGCAAGAG SYO3AOP1_0671 688323 - 690512 + | CRISPR-associated helicase Cas3 SYO3AOP1_0672 690513 - 691022 + | CRISPR-associated protein Cas4 SYO3AOP1_0673 691035 - 692015 + | CRISPR-associated protein Cas1 SYO3AOP1_0674 692017 - 692283 + | CRISPR-associated protein Cas2 SYO3AOP1_0675 694585 - 695877 + | MiaB-like tRNA modifying enzyme YliG SYO3AOP1_0676 695874 - 696893 + | translation initiation factor, aIF-2BI family TERM 454 696971 - 696949 - g 74 -7.8 -3.84648 | TTTAAGAGGATTAAA GTATTTTGTC CCG GACATAATAC AGGATTTAACAGCTA SYO3AOP1_0677 696890 - 697882 + | protein of unknown function UPF0052 and CofD SYO3AOP1_0678 697872 - 699449 + | L-aspartate oxidase SYO3AOP1_0679 699452 - 699958 + | translation initiation factor IF-3 SYO3AOP1_0680 701501 - 700572 - | ABC transporter related SYO3AOP1_0681 702406 - 701642 - | glycosyl transferase family 2 SYO3AOP1_0682 703026 - 702406 - | non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family SYO3AOP1_0683 703327 - 702998 - | hypothetical protein SYO3AOP1_0684 703794 - 703330 - | Crossover junction endodeoxyribonuclease SYO3AOP1_0685 704549 - 703794 - | protein of unknown function DUF28 SYO3AOP1_0686 704854 - 705474 + | HhH-GPD family protein SYO3AOP1_0687 705667 - 706680 + | aspartate-semialdehyde dehydrogenase TERM 455 707058 - 707047 - g 73 -4.4 -5.09259 | TATTTTAAAAGAAAA TGGT AGCT ACCA TCATGCAAAACACAG SYO3AOP1_0688 706667 - 707707 + | deoxyguanosinetriphosphate triphosphohydrolase TERM 456 708763 - 708743 - g 74 -6.9 -4.27441 | overlap 708744 AGTAGGATTAACAAA CCTTCTTCC ACC GGAAAAAGA CCCGATCAAAAGGCT TERM 457 708762 - 708744 - g 70 -8.2 -3.15742 | overlap 708743 GTAGGATTAACAAAC CTTCTTCC ACC GGAAAAAG ACCCGATCAAAAGGC SYO3AOP1_0689 707700 - 709163 + | glycosyl transferase family 39 SYO3AOP1_0690 709177 - 710109 + | porphobilinogen deaminase SYO3AOP1_0691 710150 - 710848 + | hypothetical protein SYO3AOP1_0692 710845 - 711513 + | DNA-(apurinic or apyrimidinic site) lyase SYO3AOP1_0693 711510 - 712115 + | methyltransferase GidB TERM 458 712195 - 712207 + T 76 -3.3 -5.50723 | CATTATGAGCGTCAG CGAAG AAT CTCCG TTTTTCTTTTCATCA TERM 459 712473 - 712492 + T 71 -9.2 -2.51509 | opp_overlap 712472 712471, overlap 712473 712470 712466 TTAGATAATTAAAGT CCCCTCCC CTAA GGGAGGGA GTGTTGAATGTTTTA TERM 460 712473 - 712493 + T 77 -9 -3.2099 | gap 1, opp_overlap 712472 712471, overlap 712470 712466 712473 TTAGATAATTAAAGT C-CCCTCCC CTAA GGGAGGGAG TGTTGAATGTTTTAT SYO3AOP1_0694 714745 - 712505 - | isocitrate dehydrogenase, NADP-dependent SYO3AOP1_0695 714933 - 715355 + | putative signal-transduction protein with CBS domains SYO3AOP1_0696 715352 - 715873 + | PEBP family protein SYO3AOP1_0697 717033 - 715894 - | major facilitator superfamily MFS_1 SYO3AOP1_0698 717794 - 717273 - | NADH ubiquinone oxidoreductase 20 kDa subunit SYO3AOP1_0699 719378 - 717804 - | NADH dehydrogenase (ubiquinone) 30 kDa subunit TERM 461 718383 - 718395 + g 72 -4.9 -4.84642 | overlap 718375 718374 GCCAAGTTTATCTAT GATAA GAT TTATC TTTTCTTGGTTTAAA TERM 462 718968 - 718954 - G 76 -7.2 -4.34402 | overlap 718966 GTTTTTATATCAAAA TCCTTT CTT AAAGGA TGTAAATCCGACGGA SYO3AOP1_0700 720825 - 719371 - | NADH dehydrogenase (quinone) TERM 463 719665 - 719643 - G 74 -2.1 -5.52079 | gap 1 ATATTAAAATAAAAA GCTTAGACAT AAAG ATG-CTAAAC GGCGGAGTTCCAGTG SYO3AOP1_0701 721475 - 720828 - | hydrogenase 4 membrane component (E) SYO3AOP1_0702 722421 - 721486 - | respiratory-chain NADH dehydrogenase subunit 1 SYO3AOP1_0703 724412 - 722424 - | NADH dehydrogenase (quinone) TERM 464 724701 - 724680 - H 90 -3.8 -6.06723 | opp_overlap 724653, overlap 724653 CTTTTCAAAAAAAAA TCAAAAGA GGAGAT CCTTTTGA CTAAAGTCCTCATGA TERM 465 726621 - 726638 + G 72 -8.5 -3.02043 | opp_overlap 726620 726621 726623 726637, overlap 726623 AAATTAAGTGATAAT GAGCTTA AAAA TAAGCTC TCTTCAAAAGAAATT TERM 466 727557 - 727535 - g 77 -4.3 -5.26918 | overlap 727536 727553 AGAGTTTAGAAAAAA CTTGATTAT AAAGG ATAATCAAA AACTTTGAAATAATA SYO3AOP1_0704 724968 - 727565 + | ATPase, P-type (transporting), HAD superfamily, subfamily IC SYO3AOP1_0705 727620 - 727790 + | hypothetical protein SYO3AOP1_0706 728600 - 727794 - | phosphomethylpyrimidine kinase SYO3AOP1_0707 729224 - 728604 - | pentapeptide repeat protein SYO3AOP1_0708 729286 - 729951 + | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase SYO3AOP1_0709 732214 - 730271 - | glycoside hydrolase 15-related SYO3AOP1_0710 732926 - 732192 - | pseudouridine synthase SYO3AOP1_0711 735401 - 733263 - | heavy metal translocating P-type ATPase TERM 467 733589 - 733605 + g 81 -2.2 -5.97979 | CATCCCCAACCATCG CAACGG TTTTT CCTTTG TTTTTTTCTTCTTCT TERM 468 735529 - 735545 + H 80 -5.7 -5.0916 | overlap 735530 CATATTCTAAAGTCG TGCGGGG TAT CTCCGCC TTTTTGTCTTAGAAC TERM 469 735530 - 735544 + H 80 -9.2 -3.64773 | overlap 735529 ATATTCTAAAGTCGT GCGGGG TAT CTCCGC CTTTTTGTCTTAGAA TERM 470 736991 - 737015 + G 90 -10.1 -4.12532 | opp_overlap 736989 736991 736992, overlap 736992 ATGGAGCTAAGAATA TTCTCAAGAGA AGT TCTCTTGGGAG TTTATATCTGACAAA TERM 471 736992 - 737014 + G 87 -11.4 -3.07198 | opp_overlap 736991 736989 736992, overlap 736991 TGGAGCTAAGAATAT TCTCAAGAGA AGT TCTCTTGGGA GTTTATATCTGACAA TERM 472 737014 - 736992 - g 72 -9.2 -2.64872 | opp_overlap 736992 736991, overlap 736991 736989 TGGAGCTAAGAATAT TCTCAAGAGA AGT TCTCTTGGGA GTTTATATCTGACAA TERM 473 737103 - 737146 + G 85 -9.2 -4.12198 | gap 1, opp_overlap 737113, overlap 737092 GAGTCCTCCCTTGGA TGTTATCAAAGGTAATCCATA CTT TAAGGATTATCTT-GATAGCA TTTTAAACCCTTGTC SYO3AOP1_0712 735661 - 737181 + | transposase, IS605 OrfB family SYO3AOP1_0713 737544 - 737660 + | hypothetical protein TERM 474 737674 - 737693 + F 100 -12.2 -5.46276 | GATGCTAAAATTTTT CCTCCCTA ATGT TAGGGAGG TTTTTTATGTATCTT TERM 475 737850 - 737861 + G 74 -3 -5.45802 | TACAAATATTTAGTA TACT TAGA AGTA TTTTTGTTTTCAGCA TERM 476 737956 - 737966 + G 71 -3.2 -5.15634 | GAGTTAAGATTCTGA TAGC TTT GCTG TTTTTTGCTCCCATG SYO3AOP1_0714 737700 - 738125 + | hypothetical protein SYO3AOP1_0715 738139 - 738876 + | two component transcriptional regulator, LytTR family SYO3AOP1_0716 738887 - 739822 + | Protein of unknown function DUF1722 TERM 477 739960 - 739937 - f 80 -5.2 -5.25976 | AATCAAAAAAAGAAA TCCTTCGGAC TAAA GTCCTCAGGA TGACGTAGAAAGGTT TERM 478 740243 - 740255 + F 74 -6.3 -4.37595 | TTTTCTTGCTTGCCT CTACA TCT TGTAG TCTTTTTATTTCTTT SYO3AOP1_0717 740457 - 741824 + | conserved hypothetical protein, putative cytochrome TERM 479 742122 - 742136 + G 71 -5.6 -4.56133 | ATATGGGGGCGTTAT GGGGGG TTG CTCCTC TTTTGATTGTTAGCG SYO3AOP1_0718 741842 - 743215 + | cytochrome c class I TERM 480 743219 - 743240 + F 83 -4.3 -5.63012 | opp_overlap 743193, overlap 743221 AGAAAAATCTAAGCT TTGAGGGTC TTTT GACCCTCTC TTTTTCTTTGTTTTT TERM 481 743221 - 743238 + F 100 -11.3 -4.37595 | overlap 743219 AAAAATCTAAGCTTT GAGGGTC TTTT GACCCTC TCTTTTTCTTTGTTT TERM 482 743255 - 743274 + G 71 -2.9 -5.22289 | CTTTTTCTTTGTTTT TACAGTT TTTAAT AGCTGTA TTTTTGTATTTGATA SYO3AOP1_0719 743230 - 743406 + | hypothetical protein TERM 483 743393 - 743406 + F 71 -6.7 -4.02581 | overlap 743396 743397 ACGTCTTACTTTTAG CTACC AACT GGTAG TTGTGTTTTCTCACC TERM 484 743438 - 743452 + F 86 -10 -3.57901 | overlap 743437 743435 CACCTCAGACTTTAG GACCCT TAG AGGGTC TCTCTTTTTAATCCC SYO3AOP1_0720 743569 - 743877 + | hypothetical protein TERM 485 745269 - 745288 + F 88 -11.4 -3.34806 | overlap 745267 GGAGATTCTGTTTTT CCCGGTCA AGGC TGGCCGGG TGTTATAATTGGTGT SYO3AOP1_0722 745336 - 746328 + | signal transduction histidine kinase, LytS SYO3AOP1_0723 746815 - 746303 - | Conserved protein/domain typically associated with flavoprotein oxygenase DIM6/NTAB family-like protein SYO3AOP1_0724 747242 - 746892 - | globin SYO3AOP1_0725 747648 - 749015 + | Deoxyribodipyrimidine photo-lyase SYO3AOP1_0726 749100 - 749579 + | flavin reductase domain protein FMN-binding TERM 486 750323 - 750341 + T 70 -7.3 -3.64599 | opp_overlap 750322 TTCCACTCGGAACAT GCGGGTC ACTAA GCCCCGC TTTCGCGTCTGCTCG TERM 487 750498 - 750521 + T 78 -8.9 -3.51232 | gap 1, overlap 750501 CCGCCTGACATTGTC CCT-GCCGTG GATAA CACGGCTAGG TTAGTTTACCCACAC TERM 488 750501 - 750517 + T 74 -9.4 -2.6342 | overlap 750498 CCTGACATTGTCCCT GCCGTG GATAA CACGGC TAGGTTAGTTTACCC TERM 489 751408 - 751426 + T 74 -8.9 -3.10894 | overlap 751410 CTTGGAGTTCCGGCG GACAGGT TTCTC ACCTGTC TTCGCTGCTACTCAT TERM 490 752206 - 752218 + T 88 -9.1 -4.2354 | AGGTTCTCTTTCACT CCCCT TGC AGGGG TTCTTTTCACCTTTC TERM 491 753169 - 753188 + T 72 -9.2 -2.65808 | opp_overlap 753157 753160, overlap 753166 AAAGGAGGTGATCCA GCCCCAGG TTCC CCTAGGGC TACCTTGTTACGACT TERM 492 754079 - 754099 + T 85 -10.5 -3.53343 | opp_overlap 754078 CAGTTTGGAAGGCAG TTTCACGGT TGA GCCGTGAAA TTTCACCAACCACTT TERM 493 754259 - 754248 - T 72 -5.8 -4.36914 | opp_overlap 754258 TCTTCCCCCAGAAAA GGTG TTTA CACC CCGAAGGGCTTCATC TERM 494 754691 - 754669 - T 79 -10 -2.87527 | overlap 754668 754681 GAGCCAGGATCAAAC TCTCCAAAAG AAT CTTTTGAAGA CCTCGCTCATCTCTT SYO3AOP1_0729 758742 - 756856 - | ferredoxin TERM 495 757030 - 757040 + g 70 -4 -5.00467 | opp_overlap 757030 TAGTTGATTTAAAAT CTTT TCA AAAG TTTTATTATTGTTAA TERM 496 758606 - 758622 + g 80 -6.5 -4.77036 | overlap 758608 AAACACATTCTGCAT CCGCCAA AGA TTGGCAG TTTTTCATGATAACA TERM 497 758887 - 758899 + H 70 -6.3 -4.27474 | opp_overlap 758886 ACTTACAAAAATACT GGAAT TTT ATTCC TTTATTCCTCAGTTT SYO3AOP1_0730 759050 - 760081 + | diguanylate cyclase TERM 498 760234 - 760216 - g 74 -6 -4.70453 | AATCAATAGAGAAAA TGGAGAAA TTC TGTCTCCA AAAATATTATTCGAA SYO3AOP1_0731 760100 - 760891 + | diguanylate phosphodiesterase SYO3AOP1_0732 760911 - 762839 + | protein of unknown function DUF839 SYO3AOP1_0733 763261 - 763073 - | hypothetical protein TERM 499 763543 - 763523 - g 80 -7.7 -4.33417 | TTTATGCACAAGAAA CAACTTTAA AAG TTAAAGTCG AAGACCAAACAGGTT TERM 500 763611 - 763593 - g 80 -5.2 -5.24551 | TGAAATCAAGAAAAA TGTACCGG CTA CCGAAACA ACAGTAAAAAAAGAA SYO3AOP1_0734 763450 - 765660 + | TonB-dependent receptor TERM 501 765800 - 765770 - g 73 -8.3 -3.51234 | overlap 765768 765771 765774 AGTCAAACGGAAATA CTAACCCGGTGGA TGCCC TCCACTGGGCTAA AGATTTTAAAAAAGG TERM 502 765799 - 765771 - g 74 -9.6 -2.70017 | overlap 765770 765768 765774 GTCAAACGGAAATAC TAACCCGGTGGA TGCCC TCCACTGGGCTA AAGATTTTAAAAAAG TERM 503 765796 - 765774 - g 78 -9.1 -3.48703 | overlap 765771 765770 765768 AAACGGAAATACTAA CCCGGTGGA TGCCC TCCACTGGG CTAAAGATTTTAAAA SYO3AOP1_0735 765661 - 766098 + | MotA/TolQ/ExbB proton channel SYO3AOP1_0736 766085 - 766516 + | Biopolymer transport protein ExbD/TolR TERM 504 767193 - 767177 - g 79 -6.7 -4.62441 | opp_overlap 767178 TCTTAGATAAAGAAA CTTTAAA GCT TTTAAAG AGCTTAAAATTTCCG SYO3AOP1_0737 766513 - 767268 + | TonB family protein SYO3AOP1_0738 767280 - 768632 + | Alkaline phosphatase SYO3AOP1_0739 768738 - 768857 + | hypothetical protein SYO3AOP1_0740 769081 - 770400 + | hypothetical protein SYO3AOP1_0741 770527 - 771537 + | phosphate ABC transporter, periplasmic phosphate-binding protein TERM 505 771567 - 771590 + F 100 -10.3 -5.61881 | CTAACCTCCAATTTT GCCCTACCT CTAAAA AGGTGGGGC TTTTTGTTTTTAAGA TERM 506 771832 - 771842 + F 76 -5.4 -4.95854 | TGAGGACTTTAGTCC GAAG GAT CTTC TTTTTGGGTTTTTTA SYO3AOP1_0742 772022 - 772972 + | phosphate ABC transporter, inner membrane subunit PstC SYO3AOP1_0743 772976 - 773809 + | phosphate ABC transporter, inner membrane subunit PstA SYO3AOP1_0744 773823 - 774587 + | phosphate ABC transporter, ATPase subunit SYO3AOP1_0745 774624 - 775289 + | phosphate uptake regulator, PhoU SYO3AOP1_0746 775279 - 776292 + | histidine kinase TERM 507 776321 - 776288 - f 80 -6 -4.98616 | overlap 776289 TTAAAATACCAAAAA CGTGATCCTTCGGA TTAAAG TCCGCAGGATGACA GGAAACCACTAGTGA TERM 508 776320 - 776289 - f 70 -7.3 -3.57543 | overlap 776288 TAAAATACCAAAAAC GTGATCCTTCGGA TTAAAG TCCGCAGGATGAC AGGAAACCACTAGTG SYO3AOP1_0747 776524 - 777831 + | membrane protein involved in aromatic hydrocarbon degradation TERM 509 777874 - 777889 + G 83 -6.8 -4.88293 | AAATTAGCAGTTTTA GGGACG GTTT TGTCCC TTTCTTTTTCAAGTT SYO3AOP1_0748 777853 - 778338 + | Sterol-binding domain protein TERM 510 778378 - 778352 - T 82 -9.4 -3.66658 | opp_overlap 778350 778344, overlap 778350 AATATCTTTAAAATA TCCCGAGGCTTT AAA AAGGTCTCGGGA GTCTAAATTTTCATT SYO3AOP1_0749 779158 - 778826 - | hypothetical protein TERM 511 778894 - 778916 + g 71 -7.8 -3.38224 | overlap 778883 778890 778898 TTTCTTTTTCATCTT TGAAGAATTC TAA GACTTCTTCA TCTTTAAACTCAACT SYO3AOP1_0750 780260 - 779163 - | glycine oxidase ThiO SYO3AOP1_0751 781035 - 780271 - | beta-lactamase domain protein SYO3AOP1_0752 781754 - 781029 - | short-chain dehydrogenase/reductase SDR TERM 512 781806 - 781819 + r 79 -6.7 -4.5536 | TGGCATTCCAAAGCT CGAGA AGAG TCTCG TATTTTTTTTAAATC TERM 513 781941 - 781972 + r 100 -14.6 -3.15366 | ATGACAACTTTACTT TTGTAAGGGCGATT CATG AATCGCCCTTACAC TCTTCCACTTTTCCA SYO3AOP1_0753 783964 - 782177 - | GTP-binding protein LepA TERM 514 786158 - 786170 + G 87 -7.7 -4.87665 | AATGAAAATTGTCCT GGAAG ATT CTTCC TTTTTGTCGATGGAA SYO3AOP1_0754 784034 - 786424 + | penicillin-binding protein, 1A family SYO3AOP1_0755 786714 - 787958 + | tryptophan synthase, beta subunit SYO3AOP1_0756 788410 - 789018 + | FAD-dependent pyridine nucleotide-disulphide oxidoreductase SYO3AOP1_0757 790787 - 789285 - | protein of unknown function DUF752 TERM 515 789760 - 789770 + g 75 -2.6 -5.69068 | overlap 789765 TTAATTTTCTTTATG TTTT CTA AAAA TTTTTTATCTTTTTC SYO3AOP1_0758 791812 - 790784 - | protein of unknown function DUF81 TERM 516 791030 - 791042 + g 72 -4.9 -4.77173 | opp_overlap 791017 AGCTAAAAACACTTT TAGAT AAA ATCTA TTTATTTTCTGACCA SYO3AOP1_0759 792258 - 793121 + | tRNA synthetase valyl/leucyl anticodon-binding SYO3AOP1_0760 793626 - 793366 - | hypothetical protein TERM 517 793485 - 793505 + gT 77 -4.1 -5.40072 | opp_overlap 793490, overlap 793486 CCTGAGGACGTAAGT CTAAAGAAA TTC TTTCTTTAA TTTTTTTAAAAGCAA TERM 518 793486 - 793504 + gT 74 -7.6 -3.83561 | opp_overlap 793490, overlap 793485 CTGAGGACGTAAGTC TAAAGAAA TTC TTTCTTTA ATTTTTTTAAAAGCA SYO3AOP1_0761 794615 - 793593 - | Radical SAM domain protein SYO3AOP1_0762 794687 - 796540 + | hypothetical protein TERM 519 796531 - 796541 + F 75 -2.6 -5.69473 | TGCTTTTTTGATGCT TTTA GAC TAAA TTTTTTTATGATATA SYO3AOP1_0763 796595 - 796885 + | ribosomal protein L21 SYO3AOP1_0764 796899 - 797156 + | ribosomal protein L27 TERM 520 797165 - 797186 + F 74 -6.5 -4.41114 | opp_overlap 797166, overlap 797166 GACGTAAAATACCAA ACTCGGGAT TTAA GTCCCGAGC TTTCTTATCTAATGA TERM 521 797185 - 797166 - f 85 -9.3 -4.0828 | opp_overlap 797166 797165 ACGTAAAATACCAAA CTCGGGA TTTAAG TCCCGAG CTTTCTTATCTAATG TERM 522 797166 - 797185 + F 82 -10 -3.23945 | opp_overlap 797166, overlap 797165 ACGTAAAATACCAAA CTCGGGAT TTAA GTCCCGAG CTTTCTTATCTAATG TERM 523 797221 - 797208 - g 75 -2.5 -5.64006 | ATCTAATGAAAAAAA TTTAT TCTG ATAAA TCAACAATAATCAAA SYO3AOP1_0765 797198 - 798136 + | tRNA synthetase class II (D K and N) SYO3AOP1_0766 798704 - 798120 - | peptidase M22 glycoprotease SYO3AOP1_0767 800981 - 798954 - | diguanylate cyclase with PAS/PAC sensor TERM 524 799763 - 799751 - GR 76 -6.3 -4.59773 | opp_overlap 799749 799751 TCCCATTGCCAAAAA CAAGA TGT TCTTG TATTCTATTGAGAGA SYO3AOP1_0768 801420 - 800950 - | putative signal-transduction protein with CBS domains SYO3AOP1_0769 801630 - 801809 + | hypothetical protein SYO3AOP1_0770 803253 - 802345 - | Auxin Efflux Carrier TERM 525 802385 - 802373 - G 77 -4.1 -5.4833 | CTATTCAATAAAAAA TACCA TAT TGGCA CTGATAGAAAGCTTA TERM 526 802975 - 802988 + g 81 -3.1 -5.75478 | TGTAGACATCATTAT GAATG CAAC CGTTC TTTTTTTGTCTAATT TERM 527 803062 - 803049 - G 71 -6.7 -3.97602 | overlap 803035 803047 AGATAGTCAAAAAGA TGGCT ATCC AGCCA AGGATTATAATACCC SYO3AOP1_0771 806308 - 803246 - | heavy metal efflux pump, CzcA family SYO3AOP1_0772 807366 - 806305 - | efflux transporter, RND family, MFP subunit SYO3AOP1_0773 808587 - 807424 - | outer membrane efflux protein SYO3AOP1_0774 808971 - 808654 - | hypothetical protein TERM 528 809064 - 809096 + r 82 -7.7 -4.35327 | AATAAAAATGTGATC CTTTGCTTTACAGCC CCA GGATGAATAGCAAAG TTTACTTTTTAGTCA SYO3AOP1_0775 810343 - 809183 - | arginine biosynthesis bifunctional protein ArgJ TERM 529 811691 - 811701 + G 70 -8.2 -3.00797 | opp_overlap 811691, overlap 811690 CTTGTAGCAATTACA CCGG CAG CCGG ATTTGTAGGTTTAGG TERM 530 811886 - 811899 + G 85 -8.1 -4.38927 | AATCCACAGGTTAAT CCAGC TGGA GCTGG TTTGTTGTATGGAAA SYO3AOP1_0776 810806 - 812101 + | ammonium transporter SYO3AOP1_0777 812438 - 813496 + | Cytochrome-c peroxidase TERM 531 813506 - 813528 + T 100 -13.4 -3.20109 | opp_overlap 813501 813500, overlap 813502 ATATAACAATCCTTG CCCGGGAGCT TAA AGCTCCCGGA TTAAATCATTTTATA SYO3AOP1_0778 814223 - 813534 - | oxidoreductase molybdopterin binding SYO3AOP1_0779 814520 - 814233 - | hypothetical protein SYO3AOP1_0780 814672 - 814517 - | hypothetical protein SYO3AOP1_0781 815498 - 814713 - | zinc/iron permease TERM 532 814770 - 814805 + g 100 -9 -5.33866 | opp_overlap 814766 814768, overlap 814797 ATAAAAATAAACCCG GGCTATTAGACCAAGG GTCG CCTCCGTCTCATAGCC TTTTTTATGAGTTTC TERM 533 814858 - 814848 - G 74 -6.8 -4.30719 | TTTGCTTACAATAAA GAGC ATT GCTC CACCTGCAAAGGCAA SYO3AOP1_0782 815986 - 815495 - | Redoxin domain protein SYO3AOP1_0783 816106 - 816504 + | protein of unknown function UPF0047 SYO3AOP1_0784 816506 - 817393 + | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase SYO3AOP1_0785 817405 - 817719 + | CutA1 divalent ion tolerance protein SYO3AOP1_0786 817716 - 818603 + | band 7 protein TERM 534 820466 - 820485 + G 79 -8 -4.05788 | AACTCGGTCTCTGCT TACAATCT CTAT AGATTGTA TTTAATTTCAGGAAA SYO3AOP1_0787 818798 - 820858 + | protein of unknown function DUF255 SYO3AOP1_0788 820868 - 821824 + | biotin/acetyl-CoA-carboxylase ligase TERM 535 822522 - 822540 + F 70 -7.3 -3.64599 | opp_overlap 822521 TTCCACTCGGAACAT GCGGGTC ACTAA GCCCCGC TTTCGCGTCTGCTCG TERM 536 822697 - 822720 + F 78 -8.9 -3.51232 | gap 1, overlap 822700 CCGCCTGACATTGTC CCT-GCCGTG GATAA CACGGCTAGG TTAGTTTACCCACAC TERM 537 822700 - 822716 + F 74 -9.4 -2.6342 | overlap 822697 CCTGACATTGTCCCT GCCGTG GATAA CACGGC TAGGTTAGTTTACCC TERM 538 823607 - 823625 + F 74 -8.9 -3.10894 | overlap 823609 CTTGGAGTTCCGGCG GACAGGT TTCTC ACCTGTC TTCGCTGCTACTCAT TERM 539 824405 - 824417 + F 88 -9.1 -4.2354 | AGGTTCTCTTTCACT CCCCT TGC AGGGG TTCTTTTCACCTTTC TERM 540 825368 - 825387 + F 72 -9.2 -2.65808 | opp_overlap 825356 825359, overlap 825365 AAAGGAGGTGATCCA GCCCCAGG TTCC CCTAGGGC TACCTTGTTACGACT TERM 541 826278 - 826298 + F 85 -10.5 -3.53343 | opp_overlap 826277 CAGTTTGGAAGGCAG TTTCACGGT TGA GCCGTGAAA TTTCACCAACCACTT TERM 542 826458 - 826447 - f 72 -5.8 -4.36914 | opp_overlap 826457 TCTTCCCCCAGAAAA GGTG TTTA CACC CCGAAGGGCTTCATC TERM 543 826890 - 826868 - f 79 -10 -2.87527 | overlap 826867 826880 GAGCCAGGATCAAAC TCTCCAAAAG AAT CTTTTGAAGA CCTCGCTCATCTCTT TERM 544 827053 - 827070 + F 78 -2 -5.74684 | overlap 827057 827058 ATTTTATCCCTCTTT CCTTTT CTTGTC AAGAGG TTTTTCTTTTTCTTA SYO3AOP1_0789 827214 - 828122 + | transposase IS4 family protein TERM 545 828217 - 828190 - T 80 -5.6 -5.15969 | opp_overlap 828192, overlap 828193 828194 TTTCAATTGAAAAAA CAACCCATCTCT ATTA AGAGATGGAATA GTGTTTATTCAAATA TERM 546 828214 - 828193 - T 93 -9.5 -4.67173 | opp_overlap 828192, overlap 828190 828194 CAATTGAAAAAACAA CCCATCTCT ATTA AGAGATGGA ATAGTGTTTATTCAA TERM 547 828213 - 828194 - T 87 -10.8 -3.38677 | opp_overlap 828192, overlap 828193 828190 AATTGAAAAAACAAC CCATCTCT ATTA AGAGATGG AATAGTGTTTATTCA SYO3AOP1_0790 830333 - 828222 - | Polyribonucleotide nucleotidyltransferase SYO3AOP1_0791 830632 - 830345 - | ribosomal protein S15 SYO3AOP1_0792 830907 - 832115 + | hypothetical protein SYO3AOP1_0793 832102 - 832365 + | FlhB domain protein SYO3AOP1_0794 833164 - 832349 - | 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase TERM 548 833055 - 833076 + g 76 -7.3 -4.25347 | GCTACTCTTATTTTT CCATTGTCT AATA AGTCAATGG TTTCTCTTACTGCTT SYO3AOP1_0795 835755 - 833323 - | magnesium-translocating P-type ATPase TERM 549 835088 - 835068 - G 74 -5.5 -4.81551 | opp_overlap 835086 TATTTACAGCAAAAA CAACGAT AATTAAA ATCGTTG CAACTTGTAATAGTG SYO3AOP1_0796 836970 - 835846 - | lysine 2,3-aminomutase YodO family protein TERM 550 838127 - 838137 + G 74 -5.4 -4.91852 | AAAAGTATGAACCTG CTGA AGG TCAG TTTATTTTTAATGCA SYO3AOP1_0797 837445 - 838230 + | metallophosphoesterase SYO3AOP1_0798 838261 - 839277 + | aldo/keto reductase SYO3AOP1_0799 839587 - 840819 + | carboxyl-terminal protease SYO3AOP1_0800 840821 - 841834 + | metalloendopeptidase, glycoprotease family SYO3AOP1_0801 843373 - 842294 - | chorismate mutase SYO3AOP1_0802 844147 - 843374 - | Inositol-phosphate phosphatase SYO3AOP1_0803 845620 - 844424 - | Phosphoglycerate kinase TERM 551 845441 - 845459 + g 71 -6.8 -4.03234 | TCTTCCAAGATGTGA TGCAAGAA TTA TTTTTGCA TTTCTATCAAGAAGA SYO3AOP1_0804 845982 - 845635 - | hypothetical protein SYO3AOP1_0805 847464 - 845998 - | inosine-5'-monophosphate dehydrogenase TERM 552 847485 - 847473 - H 72 -3.3 -5.1485 | TAAGCAAGATAAAAA CCTCC TAA GGATG ATATAAATTAATATT SYO3AOP1_0806 847557 - 848783 + | threonine synthase SYO3AOP1_0807 848785 - 849057 + | hypothetical protein SYO3AOP1_0808 849071 - 849349 + | MoaD family protein SYO3AOP1_0809 849349 - 849591 + | iron-sulfur cluster-binding protein SYO3AOP1_0810 849591 - 850508 + | Ppx/GppA phosphatase TERM 553 852283 - 852271 - g 74 -6.3 -4.41512 | GTACAATAAAAAACA TGGAA TAA TTCCA AAAACTATATCAAAA SYO3AOP1_0811 850523 - 852514 + | excinuclease ABC, B subunit SYO3AOP1_0812 853122 - 852847 - | Cupin 2 conserved barrel domain protein SYO3AOP1_0813 853842 - 853135 - | hypothetical protein SYO3AOP1_0814 854685 - 853906 - | phosphatidate cytidylyltransferase TERM 554 854368 - 854350 - G 75 -2.4 -5.68438 | overlap 854352 854354 GGATGAAACAAAAAA TACACTGT AAG ACAGTCCA AAAATAGTAATTGCT SYO3AOP1_0815 854858 - 854682 - | protein of unknown function DUF343 SYO3AOP1_0816 855540 - 854848 - | alanine racemase domain protein TERM 555 855688 - 855674 - H 70 -7.2 -3.57406 | overlap 855672 TGTGCATTATAAATA TGCTAT ATT ATAGCA GAAGGCTTATTAAGA TERM 556 856188 - 856170 - H 77 -8.2 -3.84648 | overlap 856166 GAATTGAAAAAGCAA GACGCTAA AAA TTAGCATC TCAAAGATTTCTAAC SYO3AOP1_0817 856416 - 856715 + | hypothetical protein SYO3AOP1_0818 856734 - 858182 + | glutamyl-tRNA(Gln) amidotransferase, B subunit SYO3AOP1_0819 858179 - 859495 + | adenylosuccinate lyase TERM 557 859638 - 859607 - f 74 -7.2 -4.03751 | overlap 859609 AAAAGAAAAGTGAAA CAGTTTGGGCGATT CATG AATCGCCCTTACAG AATAAGCTAAAAAGT TERM 558 859636 - 859609 - f 75 -8.4 -3.57389 | overlap 859607 AAGAAAAGTGAAACA GTTTGGGCGATT CATG AATCGCCCTTAC AGAATAAGCTAAAAA TERM 559 861057 - 861043 - g 79 -7.2 -4.42235 | AACTTTTAAAAAGAA TCTTGA ATA TCAAGA TAAAATAGTTGAAAT SYO3AOP1_0820 859925 - 861238 + | RNA modification enzyme, MiaB family SYO3AOP1_0821 861241 - 861723 + | protein of unknown function DUF151 TERM 560 861930 - 861918 - g 75 -4.9 -4.98461 | AAACAAGAAAATAAA CTAAT TCT ATTAG ATATCTCAGCAAAGT TERM 561 863539 - 863526 - g 74 -5.3 -4.78661 | ATTGAAAAATCAAAA CTATC AAAT GATAG TATAAAAAATGTTTT SYO3AOP1_0822 861804 - 863576 + | Highly conserved protein containing a thioredoxin domain SYO3AOP1_0823 864498 - 863566 - | 3-oxoacyl-(acyl-carrier-protein) synthase III TERM 562 864171 - 864157 - G 80 -7.8 -4.16904 | AATACCATATATAAA GCCGCT ACA AGCAGC TGAAAAATCAAAAGC TERM 563 864348 - 864335 - G 71 -6.7 -4.09685 | TTTGATGCGTGAAAA GCAAG GTCG CTTGC CTTAACCCATTCATC SYO3AOP1_0824 865549 - 864491 - | fatty acid/phospholipid synthesis protein PlsX SYO3AOP1_0825 865726 - 865550 - | ribosomal protein L32 SYO3AOP1_0826 866303 - 865776 - | protein of unknown function DUF177 TERM 564 866124 - 866147 + g 72 -6 -4.35044 | opp_overlap 866128 AATAGACGTGTTGAA GATAGCTGTG ATAA CATAGCCATC TTTGTCTTTAAGTAA TERM 565 866644 - 866660 + G 74 -8.7 -3.37303 | opp_overlap 866639 866643 866644, overlap 866639 ATTTGTAGAAGGAAG GTCTTCC TTA GGAAGGC TTGGCTTATTTATTG SYO3AOP1_0827 866345 - 866887 + | deoxycytidine triphosphate deaminase SYO3AOP1_0828 867149 - 867871 + | NLP/P60 protein SYO3AOP1_0829 867858 - 868394 + | 20S proteasome A and B subunits TERM 566 869730 - 869711 - g 76 -3.6 -5.41143 | opp_overlap 869711 CATCTTGTAAAAAAA GGTTTGAA TACT TTAAAACC TGTCCTGAATGTGAT SYO3AOP1_0830 868387 - 870372 + | Primosomal protein N' (replication factor Y) - superfamily II helicase-like protein TERM 567 870950 - 870924 - g 79 -4.7 -5.27335 | gap 1, opp_overlap 870927, overlap 870918 CTTGTCAAACAAAAA CTTTCTGAAAAT TCAG ATTTT-AGAAAG CAGTTTATCGAAAAT SYO3AOP1_0831 870606 - 871724 + | efflux transporter, RND family, MFP subunit TERM 568 871728 - 871738 + G 81 -4 -5.58209 | opp_overlap 871728 ATTGGTAAATAAGAT GTAT CAT ATAC TTTTTTTAGCTTTAA SYO3AOP1_0832 871726 - 872979 + | protein of unknown function DUF214 SYO3AOP1_0833 872976 - 873650 + | ABC transporter related SYO3AOP1_0834 873689 - 874450 + | MotA/TolQ/ExbB proton channel SYO3AOP1_0835 874454 - 875248 + | OmpA/MotB domain protein SYO3AOP1_0836 875211 - 875627 + | hypothetical protein TERM 569 875805 - 875795 - gT 86 -4 -5.9003 | AAAGTAAGAAAAAAA TTCA AGA TGAA AGATATAAAAAGCTT SYO3AOP1_0837 875587 - 876024 + | hypothetical protein SYO3AOP1_0838 877141 - 876533 - | formate dehydrogenase family accessory protein FdhD SYO3AOP1_0839 878078 - 877128 - | cysteine synthase B SYO3AOP1_0840 878923 - 878552 - | 7-cyano-7-deazaguanine reductase SYO3AOP1_0841 879787 - 878924 - | Polyprenyl synthetase TERM 570 879172 - 879182 + g 72 -2.6 -5.48054 | AAGCAAGACCGATAT TTAT TCC ATAA TTTTTTAATTTTAGT TERM 571 879929 - 879909 - R 72 -4.8 -4.74219 | gap 1, overlap 879911 ACAAAGAAACTAAAA GAGGCAATT CATG AATTGCC-C GTACAGAAAAAGGTG TERM 572 879928 - 879911 - R 79 -8.5 -3.95442 | overlap 879909 AAAGAAACTAAAAGA GGCAATT CATG AATTGCC CGTACAGAAAAAGGT SYO3AOP1_0842 880519 - 880328 - | Rubredoxin-type Fe(Cys)4 protein SYO3AOP1_0843 881759 - 880503 - | protein of unknown function DUF224 cysteine-rich region domain protein TERM 573 882318 - 882294 - g 71 -8 -3.31726 | overlap 882295 CTTTGGTACAGAAGA CCTTGAAGTT CAAAC AACTTCAAGA GGGACCGAGTTTCCA TERM 574 882317 - 882295 - g 71 -9.3 -2.58822 | overlap 882294 TTTGGTACAGAAGAC CTTGAAGTT CAAAC AACTTCAAG AGGGACCGAGTTTCC SYO3AOP1_0844 881965 - 882390 + | S-adenosylmethionine decarboxylase proenzyme TERM 575 882420 - 882397 - f 75 -8 -3.7456 | opp_overlap 882399, overlap 882395 882399 TTATATTAATAAACA TACGCCGGCC TAAC GGCTGGCGTT TTTAAAAATGACTAG TERM 576 882418 - 882399 - f 85 -10.6 -3.44527 | opp_overlap 882399, overlap 882397 882395 ATATTAATAAACATA CGCCGGCC TAAC GGCTGGCG TTTTTAAAAATGACT TERM 577 882399 - 882418 + F 100 -12.8 -4.60041 | opp_overlap 882397 882395 882399 ATATTAATAAACATA CGCCGGCC TAAC GGCTGGCG TTTTTAAAAATGACT TERM 578 882493 - 882510 + F 72 -8.5 -3.10192 | overlap 882488 TCTAACTTCTGTAAT GGCAATT CATG AATTGCC TCTACTTTCATTTTC SYO3AOP1_0845 883048 - 884055 + | Ferrochelatase SYO3AOP1_0849 889629 - 886918 - | (Glutamate--ammonia-ligase) adenylyltransferase TERM 579 889765 - 889796 + H 95 -11.6 -3.94333 | overlap 889767 ACTTCTCATCCTCTT CTGTAGGGGCGATT CATG AATCGCCCCTACTC TTTCACTTTTCCATT TERM 580 889767 - 889794 + H 100 -18.6 -3.54879 | overlap 889765 TTCTCATCCTCTTCT GTAGGGGCGATT CATG AATCGCCCCTAC TCTTTCACTTTTCCA SYO3AOP1_0850 889940 - 890575 + | hypothetical protein TERM 581 891653 - 891678 + G 75 -4.7 -5.10461 | overlap 891656 891657 TCATTTAAAACACAA TCTTTGGAGAG AAAA CTCTTCAGTGA TTTTTGTTGGCTACC SYO3AOP1_0851 890586 - 891980 + | beta-lactamase domain protein TERM 582 892139 - 892120 - g 73 -7.8 -3.66365 | overlap 892132 CAGCAGACAAAGGAA GCAACGGA AGCA TCCGGTGC AGAAATGATAACGGT TERM 583 892264 - 892244 - g 71 -8.3 -3.35046 | overlap 892242 TGATTCTTCCAAACA CTGCTGGAT GTT ATACAGCAG AGGAGGCTATTTTAA SYO3AOP1_0852 892003 - 892806 + | thiazole biosynthesis family protein SYO3AOP1_0855 894082 - 894714 + | hypothetical protein SYO3AOP1_0856 894724 - 895422 + | phosphoribosylaminoimidazole-succinocarboxamide synthase SYO3AOP1_0857 895419 - 896318 + | UTP-glucose-1-phosphate uridylyltransferase TERM 584 896925 - 896911 - g 83 -4.4 -5.57054 | opp_overlap 896911 896913 AATAATGTAAAAAAA TATAAA AAT TTTATA TCTCATCTGTTCCAA SYO3AOP1_0858 896305 - 897081 + | dimethyladenosine transferase SYO3AOP1_0859 897071 - 897349 + | protein of unknown function DUF503 TERM 585 897499 - 897515 + G 82 -5.1 -5.4182 | opp_overlap 897499 AGACACTACAGCAGA CTTAAGC GAA GCTCAAG TTTTTATTTCTGCTT SYO3AOP1_0860 897365 - 897673 + | ribosome-binding factor A TERM 586 897826 - 897809 - f 71 -8.5 -2.93712 | overlap 897804 AATAAAAGGAGTAGA GGCAATT CATG AATTGCC CGACAGTAAATAAGT SYO3AOP1_0861 898010 - 898201 + | ribosomal protein L28 SYO3AOP1_0862 898271 - 898528 + | hypothetical protein SYO3AOP1_0863 898509 - 899549 + | GTP-binding protein Obg/CgtA SYO3AOP1_0864 899521 - 900456 + | methionyl-tRNA formyltransferase SYO3AOP1_0865 901320 - 900661 - | protein of unknown function DUF1271 SYO3AOP1_0866 901396 - 901965 + | protein of unknown function DUF429 TERM 587 902089 - 902075 - g 74 -5.7 -4.68506 | AATTAATCTCAAAAA CAGCT GAAAA AGCTG GAATTACAAAGGCAG SYO3AOP1_0867 902047 - 902325 + | histone family protein DNA-binding protein TERM 588 902344 - 902372 + F 83 -6.8 -4.8743 | opp_overlap 902344 CAATTTTGCAGAAAA GGGTTGGGAT ATCTAATTA ATCTCAACCC TTTGTTTATTTTAAA TERM 589 902447 - 902422 - f 76 -3.5 -5.37593 | opp_overlap 902415 902422 902444, overlap 902444 TTTTAAACTAAAAAA TTTAATTATTT TATA ACATAATTAAA GCTTTTATATTATAA SYO3AOP1_0868 903079 - 903654 + | protein of unknown function DUF151 SYO3AOP1_0869 903672 - 904244 + | Appr-1-p processing domain protein TERM 590 904234 - 904244 + F 70 -4 -4.97957 | opp_overlap 904234 TCCTTAATGCAAATA TCAA TGA TTGA TTTTATTCTTATATC TERM 591 904397 - 904386 - gf 86 -3 -6.12328 | AGAAGAGAAAAAAAA CTTT ATCA AAAG ATCTCAAGAACTTAT SYO3AOP1_0870 904237 - 905028 + | hypothetical protein SYO3AOP1_0871 905003 - 905647 + | two component transcriptional regulator, winged helix family TERM 592 906132 - 906122 - g 77 -4 -5.50499 | GCACACTCAAAAAAA TTCA ATT TGAA AGAAAAGAAGAAGAA SYO3AOP1_0872 905644 - 906489 + | hypothetical protein SYO3AOP1_0873 906682 - 906470 - | DNA-directed RNA polymerase, omega subunit TERM 593 906742 - 906765 + r 76 -9.6 -3.05579 | overlap 906737 ACCTCTTCTTTGTCA TCCTTAGGAC TTTA GTCCGAAGGA TCTCCTCTTTTATTG SYO3AOP1_0874 907610 - 906993 - | Guanylate kinase SYO3AOP1_0875 909076 - 907607 - | proton-translocating NADH-quinone oxidoreductase, chain N TERM 594 909046 - 909033 - G 71 -5.3 -4.56729 | AGTAAAACATTAAAA TTTGG AACT CCAAA ACCTGACACGATTTG SYO3AOP1_0876 910590 - 909082 - | proton-translocating NADH-quinone oxidoreductase, chain M SYO3AOP1_0877 912550 - 910604 - | proton-translocating NADH-quinone oxidoreductase, chain L TERM 595 912057 - 912067 + g 71 -3.2 -5.31275 | opp_overlap 912037 GCTTCCATAGCAGCA TTCG CCG CGGA TTTTTTATAGTGCCA TERM 596 912220 - 912203 - G 72 -7.1 -3.83324 | opp_overlap 912206, overlap 912206 TGATAAATATGCAAA GAATCTT GGAT AAGATTC ATCACCTTTCATATA SYO3AOP1_0878 912857 - 912555 - | NADH-ubiquinone oxidoreductase chain 4L SYO3AOP1_0879 913387 - 912857 - | NADH-ubiquinone/plastoquinone oxidoreductase chain 6 SYO3AOP1_0880 913980 - 913378 - | 4Fe-4S ferredoxin iron-sulfur binding domain protein SYO3AOP1_0881 914992 - 913982 - | NADH dehydrogenase (quinone) SYO3AOP1_0882 917425 - 915683 - | NADH-ubiquinone oxidoreductase chain 49kDa SYO3AOP1_0883 917953 - 917438 - | NADH-quinone oxidoreductase, B subunit SYO3AOP1_0884 918315 - 917944 - | NADH-ubiquinone/plastoquinone oxidoreductase chain 3 TERM 597 918788 - 918772 - R 77 -7.9 -4.0056 | AGAAAGAGGGACAAA GGCGGAG ATT CTTCGCC GGCTGCAGAATGACG SYO3AOP1_0885 919673 - 918837 - | Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase SYO3AOP1_0886 920512 - 919673 - | hypothetical protein SYO3AOP1_0887 922224 - 920545 - | Non-specific serine/threonine protein kinase TERM 598 921463 - 921481 + g 80 -8.9 -3.64259 | opp_overlap 921463, overlap 921450 TGGAGTTCCTGATAA TGCCCAT CTATA ATGGGCA TTCTTAGAAATACTT TERM 599 921481 - 921463 - G 78 -9.6 -3.29511 | opp_overlap 921450 921463 TGGAGTTCCTGATAA TGCCCATC TAT AATGGGCA TTCTTAGAAATACTT SYO3AOP1_0888 922732 - 922217 - | hypothetical protein TERM 600 922371 - 922358 - G 70 -3.9 -5.00884 | ATCTTCGGGAAAAAA CTTTA GATT TAAAG CCGGAAACTTACCAG TERM 601 922796 - 922785 - H 71 -3 -5.31059 | opp_overlap 922785, overlap 922777 ATACCAATTAAAAAA GTAA TAAT TTAC ATTTTTTAAAAAAGC SYO3AOP1_0889 923184 - 925037 + | chaperone protein DnaK TERM 602 925071 - 925100 + F 80 -5.7 -5.06472 | CTTTTAAAAATATGA CCGAGGTGGGT TGAAAAAT ATCTGCCTCGG TTTTATTATTTATAT SYO3AOP1_0890 925145 - 926035 + | peptidase M48 Ste24p TERM 603 926067 - 926084 + T 73 -8.4 -3.47218 | TAAATAATTCCTAAC TCGGGG GATAAG CCCCGA TTCAATTTTTAATCC TERM 604 926554 - 926523 - T 75 -2.8 -5.59502 | overlap 926525 926527 CAAAAAATCAAAAAA GAGATCCTTCGGGC TAAA GCCCTTAGGATGAC AAAGAAAGTGAAAAT SYO3AOP1_0891 927130 - 926651 - | hypothetical protein SYO3AOP1_0892 928485 - 927166 - | membrane-associated zinc metalloprotease TERM 605 928227 - 928217 - G 78 -6.8 -4.4078 | opp_overlap 928217 928216 GCTTTTGAATGAAAA GACC TTG GGTC GTTGTAGGCTTCTTT TERM 606 928750 - 928777 + r 73 -7.8 -3.61646 | overlap 928755 TCTCACATATTCATT GTATGGGCAATT CATG AATTGCCTCTAC TTACTTTCTCACCTT TERM 607 928755 - 928772 + r 72 -8.5 -3.00667 | overlap 928750 CATATTCATTGTATG GGCAATT CATG AATTGCC TCTACTTACTTTCTC SYO3AOP1_0893 929703 - 928897 - | hemolysin A SYO3AOP1_0894 929868 - 929707 - | hypothetical protein SYO3AOP1_0895 930388 - 929879 - | peptide deformylase SYO3AOP1_0896 930911 - 930390 - | amino acid-binding ACT domain protein SYO3AOP1_0897 931321 - 930914 - | glycine cleavage system H protein SYO3AOP1_0898 932749 - 931370 - | pyridine nucleotide-disulphide oxidoreductase dimerisation region SYO3AOP1_0899 933650 - 933048 - | hypothetical protein SYO3AOP1_0900 934359 - 933853 - | hypothetical protein SYO3AOP1_0901 936548 - 934422 - | ferrous iron transport protein B SYO3AOP1_0902 936772 - 936542 - | FeoA family protein SYO3AOP1_0903 937538 - 936825 - | hypothetical protein TERM 608 937432 - 937410 - G 71 -2 -5.40072 | opp_overlap 937414 TTTTGTGTAAAAAAA GTAATTTTCA TTT TGAGAATTTC CTGTTCCAAGCGTTT SYO3AOP1_0904 937717 - 937535 - | hypothetical protein TERM 609 937997 - 937985 - g 76 -6.3 -4.61147 | overlap 937987 GAAGACCAGATAAAA CTTCT TCA AGAAG AAGTACAAAAACTAA TERM 610 938246 - 938236 - g 77 -3.2 -5.59502 | TAAAAAACCAAAAAA CACC ATA GATG CCAAAAGACTAATCC SYO3AOP1_0905 937889 - 939244 + | hypothetical protein TERM 611 940770 - 940786 + G 74 -5.9 -4.73388 | AAAAGCTCAAGGGTT CATCTTT GGA AGAGATG TTTTTGATAGACCTT SYO3AOP1_0906 939298 - 940914 + | hypothetical protein TERM 612 940966 - 940985 + F 100 -7.8 -5.40625 | CCTCCTATTATTTAG CCGGTAGT TTAT GCTGCCGG TTTTTTATATGATAT SYO3AOP1_0907 941072 - 941602 + | FMN-binding domain protein SYO3AOP1_0908 941599 - 942537 + | hypothetical protein TERM 613 942557 - 942533 - T 74 -3.8 -5.2696 | gap 1, overlap 942538 TTAAAACGGAAAAAA CTTA-ATTTCT TCAA AGAAATCTAAG AAATTTTTATTAAAC SYO3AOP1_0909 943399 - 942518 - | ApbE family lipoprotein SYO3AOP1_0910 943845 - 943666 - | hypothetical protein TERM 614 943902 - 943886 - R 71 -8.1 -3.18735 | opp_overlap 943882 943886 CTAATATTGTAGCAA TTGAGAT TTA ATCTCAA TATGATTTAAATAAG TERM 615 943886 - 943902 + r 70 -8.1 -3.02324 | opp_overlap 943886, overlap 943882 CTAATATTGTAGCAA TTGAGAT TTA ATCTCAA TATGATTTAAATAAG SYO3AOP1_0911 946996 - 944387 - | UTP-GlnB uridylyltransferase, GlnD TERM 616 945545 - 945556 + g 71 -3 -5.13648 | TAAAAATATTGCCCA GATT AATA AATC TTTTCTTTGTATTTC TERM 617 945570 - 945588 + g 81 -3.2 -5.75538 | TCTTTTCTTTGTATT TCTTTG TAAATCT CAAAGA TTTTTATTTTTTGAA TERM 618 947080 - 947068 - R 72 -2.7 -5.43487 | AAATTATATAAAAAA TCTCT TAC AGAAA ATAGATATTAAATTA TERM 619 948003 - 947993 - R 75 -2.6 -5.63517 | opp_overlap 947993 TTGGGAAAGAAAAAA TAAA GGT TTTA CTTGATAAACTCTGT SYO3AOP1_0913 949271 - 948036 - | transposase mutator type TERM 620 949239 - 949259 + g 77 -4.1 -5.3236 | opp_overlap 949244, overlap 949242 CTCTGTGGATCTGTT TAATACTTT TTC AAAGTATTC TTTTTTATCCATTAT TERM 621 949242 - 949256 + g 74 -5.8 -4.73105 | opp_overlap 949244, overlap 949239 TGTGGATCTGTTTAA TACTTT TTC AAAGTA TTCTTTTTTATCCAT SYO3AOP1_0914 950106 - 950909 + | predicted phospho-2-dehydro-3-deoxyheptonate aldolase SYO3AOP1_0915 950969 - 951067 + | hypothetical protein TERM 622 951104 - 951141 + G 78 -2.2 -5.86609 | gap 1, opp_overlap 951104 GTTAGATGATATCAA GAAGTTAGGAAAT-ATA TTTTT TATTATTTCCTTTCTTC TTTTTCTTTTTTTAG SYO3AOP1_0916 951087 - 952154 + | protein of unknown function UPF0118 SYO3AOP1_0917 953338 - 952574 - | MazG family protein SYO3AOP1_0918 954931 - 953351 - | serine/threonine protein kinase TERM 623 954292 - 954308 + g 72 -3.7 -5.29782 | overlap 954289 954294 GTATGTAAAACTTTT CATTGAA ATT TTCAAAG TTTTTTCTAAATGTC SYO3AOP1_0919 955907 - 954933 - | thymidylate synthase complementing protein ThyX TERM 624 955454 - 955440 - G 84 -5.6 -5.5112 | opp_overlap 955439, overlap 955442 TCCATCAATAAAAAA CACGGC GTA GCCGTC ATACTCTTTTTTTAA TERM 625 955452 - 955442 - G 85 -8.2 -4.39002 | opp_overlap 955439, overlap 955440 CATCAATAAAAAACA CGGC GTA GCCG TCATACTCTTTTTTT TERM 626 955852 - 955838 - G 70 -6.4 -4.31433 | CACTGTTATAACAAA CCCTTG CCC CAAGAG CTGTAAATGGAAAAC SYO3AOP1_0920 956204 - 956716 + | putative PAS/PAC sensor protein SYO3AOP1_0921 956844 - 958295 + | methyl-accepting chemotaxis sensory transducer TERM 627 959005 - 958990 - g 71 -3.2 -5.22039 | TTTAAACGCAAAAAA TACAGC GTTA GCAGTA TACAACTCTGTAAAA SYO3AOP1_0922 958433 - 959920 + | methyl-accepting chemotaxis sensory transducer TERM 628 960078 - 960060 - g 80 -8.9 -3.72576 | overlap 960074 CTTGCTTGCACTAAA TGCAGCT ATAGA AGCTGCA AGAGTTGGAGAGATG SYO3AOP1_0923 959962 - 960219 + | methyl-accepting chemotaxis sensory transducer SYO3AOP1_0924 960410 - 961345 + | response regulator receiver modulated CheW protein SYO3AOP1_0925 961458 - 961814 + | S23 ribosomal protein TERM 629 963110 - 963098 - g 71 -7.7 -3.543 | TTAGAAAAGTTAGAA GAACC TTT GGTTC ACATCATCAGAAATG SYO3AOP1_0926 961967 - 963925 + | CheA signal transduction histidine kinase TERM 630 964212 - 964198 - g 91 -4.3 -6.00086 | overlap 964201 ATACCAGAAAAAAAA CAATC AACAA GATTG ATAATTTTAGAAACA SYO3AOP1_0927 963940 - 964413 + | CheW protein TERM 631 964640 - 964628 - g 76 -3.5 -5.40072 | GTTTTTCCAAAAAAA TAAAA ATG TTTTA AAAAGCTATGTAAAA SYO3AOP1_0928 964413 - 964892 + | heat shock protein DnaJ domain protein SYO3AOP1_0929 964894 - 965454 + | putative chemotaxis phosphatase, CheZ SYO3AOP1_0930 965468 - 965860 + | response regulator receiver protein TERM 632 966064 - 966037 - T 77 -10 -2.57092 | overlap 966042 AAGGTGAGTAAGTGA GTAGAGGCAATT CATG AATTGCCTATAC AGTAAATAAGTGAGA TERM 633 966059 - 966042 - T 71 -8.5 -2.83409 | overlap 966037 GAGTAAGTGAGTAGA GGCAATT CATG AATTGCC TATACAGTAAATAAG TERM 634 966107 - 966088 - T 90 -9.2 -4.71061 | AGTGAGAGGTAAAAA GGCGGAGA TCCT TCGCCGCC TTCAGAATAACGCAT SYO3AOP1_0931 967359 - 966832 - | Inorganic diphosphatase TERM 635 967429 - 967445 + r 77 -10.1 -2.65264 | opp_overlap 967440 TCGAACCCCCGACCA GCCGGTT AAC AGCCGGC TGCTCTGCCTGCTGA TERM 636 968043 - 968062 + r 84 -10.8 -3.06183 | GGTTGATGGACGTTG GGGCAATT CATG AATTGCCC TTACGTAAAGGTGAA SYO3AOP1_0932 969805 - 968507 - | Arsenical pump membrane protein SYO3AOP1_0933 970236 - 969811 - | protein tyrosine phosphatase SYO3AOP1_0934 971192 - 970233 - | permease TERM 637 970453 - 970439 - G 73 -7.8 -3.63569 | TTAATGCTTGAATAA CCGGCA AAA TACCGG CAGAGTTAGAATATA SYO3AOP1_0935 971439 - 971194 - | glutaredoxin family protein SYO3AOP1_0936 971747 - 971436 - | transcriptional regulator, ArsR family SYO3AOP1_0937 974874 - 972058 - | DEAD/DEAH box helicase domain protein TERM 638 973757 - 973773 + g 74 -2.3 -5.67283 | overlap 973758 TTTTTTGCAATATTT TTTAAAG ACT CTTTAAC TTTTTTCTTTAGATT TERM 639 973805 - 973835 + g 100 -10.6 -4.84918 | CTCCAAGAAGTACCG CCGATTTTATCAAT CTG AATGATAGAATCGG TTTTGTATTTATGAA TERM 640 974338 - 974348 + g 70 -4 -5.0925 | overlap 974338 TTCTTCTATTTCTTT TCTT GTT AAGA TTTTTGATTTTAAAA TERM 641 976011 - 975998 - H 74 -5.3 -4.80882 | opp_overlap 975998 ATTCTACATTAAAAA GCTTA GGCT TAAGC TATTCAAACAACATA TERM 642 978001 - 977991 - g 75 -2.6 -5.63517 | opp_overlap 977991 TTGGGAAAGAAAAAA TAAA GGT TTTA CTTGATAAACTCTGC SYO3AOP1_0940 977618 - 978322 + | hypothetical protein SYO3AOP1_0943 980991 - 980065 - | quinolinate synthetase complex, A subunit TERM 643 980667 - 980688 + g 78 -5.9 -4.86862 | opp_overlap 980667 980672 TTATATAAGACACTA CAACAGCAT CCGG ATGCTCTTG TTTTAATTTTTTAAC TERM 644 980831 - 980841 + g 71 -5.4 -4.67556 | opp_overlap 980829 980831 CAGAAAACAATAATA TCAG CAT CTGA TTTTTGAGCTATTCT SYO3AOP1_0944 982036 - 981113 - | Rhodanese domain protein SYO3AOP1_0945 982098 - 983213 + | riboflavin biosynthesis protein RibD SYO3AOP1_0946 984380 - 983412 - | 4-hydroxythreonine-4-phosphate dehydrogenase SYO3AOP1_0947 984616 - 984374 - | hypothetical protein SYO3AOP1_0948 984963 - 984610 - | hypothetical protein SYO3AOP1_0949 985275 - 984973 - | hypothetical protein SYO3AOP1_0950 985505 - 985272 - | SirA family protein SYO3AOP1_0951 986333 - 985515 - | UBA/THIF-type NAD/FAD binding protein TERM 645 985980 - 985961 - G 74 -6.6 -4.23486 | opp_overlap 985963, overlap 985958 AACCATCTAAAACAA TATCATAA TCTT TTATGATA TCTAAAACATTTGAT TERM 646 986957 - 986945 - g 74 -7.7 -3.90489 | opp_overlap 986941, overlap 986941 GAAAAAATAAAGTAA GCGAT ATT ATCGC TAAAATTCATTTTAA SYO3AOP1_0952 986419 - 987195 + | hypothetical protein TERM 647 987615 - 987645 + G 77 -7.6 -4.09685 | overlap 987618 ACAATAGAAGCTGCA TCTCTGTGTATGAA ATC TTCAAACGCAGTGA TTTTAAAAGGTGGAA SYO3AOP1_0953 987210 - 988550 + | gamma-glutamyl phosphate reductase SYO3AOP1_0954 988618 - 989070 + | hypothetical protein TERM 648 989188 - 989202 + G 70 -7.2 -3.63341 | TATGCGAAGAGGCTG GAATAG ATG CTATTC TTGTTGGAGACTCTT TERM 649 989688 - 989674 - g 80 -7.2 -4.72486 | CAGAAAGTTTAAAAA TTCCAA CCA TTGGAA TAGGAGCCGGAAAGT SYO3AOP1_0955 989085 - 989873 + | 3-methyl-2-oxobutanoate hydroxymethyltransferase SYO3AOP1_0956 989863 - 990450 + | Sua5/YciO/YrdC/YwlC family protein SYO3AOP1_0957 990991 - 990506 - | TPR repeat-containing protein SYO3AOP1_0958 991440 - 990946 - | peptidase C39 bacteriocin processing TERM 650 991405 - 991380 - GR 88 -9 -4.24606 | AAGGTACATTTAAAA CCTCTCCCCC GTAAGA GAGGGAGAAG AGTAAAAAAGAAATA SYO3AOP1_0959 991847 - 991449 - | hypothetical protein TERM 651 991591 - 991610 + g 86 -5.8 -5.33026 | overlap 991586 AACATATGGATTTGA TTGTCAGA CATT TTTGACAA TTTTTCTTTAACTTC TERM 652 991789 - 991748 - G 85 -8.1 -4.3739 | opp_overlap 991757 GATTTTCTGAGAAAA TACTATCAACCATTGCAGC CGGA GCTGAAGAGGTTGATAATA AAGTCATATAACCTG SYO3AOP1_0960 992886 - 992179 - | hypothetical protein SYO3AOP1_0961 995644 - 992969 - | SMC domain protein TERM 653 993589 - 993601 + g 72 -4.9 -4.80077 | GATAATTATCTTCTT TTTCT TTA AGAAA TTCTTTTTCTTTTAA TERM 654 993649 - 993664 + g 100 -6.2 -6.01725 | TTTTATCTAACTTTT CTCTTA GTTC TAAGAG TTTTTTATTTTTATT TERM 655 993679 - 993697 + g 91 -4.6 -5.9362 | GTTTTTTATTTTTAT TTTCAAGC TCT GCTTCAAA TTTTTTTATGTTTTC TERM 656 993933 - 993961 + g 85 -6.9 -4.94672 | TTTTGAATATTTTTT GATTGTAGATTTT TAA AAAATCCATAATC TTTTTGATGTTCTTT TERM 657 994155 - 994168 + g 74 -5.3 -4.80167 | TCTTGCTTTTCCTTT TCTTC TTTT GAAGA TTTTAGTTTTTCGTC SYO3AOP1_0962 995955 - 995641 - | protein of unknown function DUF77 TERM 658 996728 - 996714 - g 71 -2.9 -5.22039 | TGTAAACTCAAAAAA GATAT CAGAT ATATC AAAAGTTTTAGCACA SYO3AOP1_0963 996502 - 997590 + | DNA polymerase III, beta subunit TERM 659 998658 - 998646 - g 71 -7.7 -3.48172 | opp_overlap 998645, overlap 998645 CAAACTAAAACAAAG CTTGG AAA CCAAG ATGTTAAAAGAATCG SYO3AOP1_0964 997608 - 1000046 + | DNA gyrase, B subunit SYO3AOP1_0965 1000057 - 1000821 + | ErfK/YbiS/YcfS/YnhG family protein TERM 660 1001271 - 1001285 + G 78 -5.8 -4.7497 | CGTCGGGAGATTATT TTGTTA GAT TAACAA TTTTTGATAAATCAG SYO3AOP1_0966 1000868 - 1001347 + | hypothetical protein TERM 661 1002696 - 1002714 + G 91 -4.6 -5.95286 | overlap 1002693 CTTTATTATGATTCT CTTTATAG AGG CTTTAAAG TTTTTTGTTTTTAAT SYO3AOP1_0967 1001344 - 1002849 + | integral membrane protein MviN TERM 662 1003558 - 1003548 - f 75 -2.6 -5.63517 | opp_overlap 1003548 TTGGGAAAGAAAAAA TAAA GGT TTTA CTTGATAAACTCTGC TERM 663 1005866 - 1005847 - f 74 -2.9 -5.48303 | overlap 1005849 ACAAGCTTAAAAAAA TCCTGTA TAATAT TACAGAA TTAAATATAATGGAG SYO3AOP1_0970 1005888 - 1006511 + | ATP synthase F0, A subunit SYO3AOP1_0971 1006524 - 1006925 + | hypothetical protein SYO3AOP1_0972 1006951 - 1007295 + | ATP synthase F0, C subunit TERM 664 1007322 - 1007341 + F 95 -10.7 -4.66746 | overlap 1007320 GCTTAAAAATTTGTT GGCAGCC ATAAAA GGCTGCC TTATTTTATTTTATA TERM 665 1007410 - 1007392 - g 71 -5.4 -4.61284 | AATATGAAAGCAAAA TCTCATTT ATC AAATAAGA AAAGAAAGAGAGCTT TERM 666 1007478 - 1007468 - g 70 -4 -5.08088 | AAGCCGGAAGAAAAA TCTT AGC AAGA AGAAGAGCAAAAGGA SYO3AOP1_0973 1007380 - 1007517 + | ribosomal protein L34 TERM 667 1007700 - 1007715 + G 71 -9 -2.51969 | opp_overlap 1007689 1007698 1007700, overlap 1007698 AAAAGACTACTAAGA GAAGCC GTAA GGCTTC GTCTTAACTTATTAG TERM 668 1007715 - 1007700 - g 77 -9 -3.21981 | opp_overlap 1007700 1007698, overlap 1007689 1007698 AAAAGACTACTAAGA GAAGCC GTAA GGCTTC GTCTTAACTTATTAG SYO3AOP1_0974 1007592 - 1007846 + | ribonuclease P protein component SYO3AOP1_0975 1007839 - 1008048 + | protein of unknown function DUF37 TERM 669 1008106 - 1008130 + G 73 -7.9 -3.64281 | overlap 1008104 1008109 AGGTTTATGATATTT TTTGGAGCAGT TGC ACTGCTTCTAA TATCTTTTTCTCTAA TERM 670 1008109 - 1008127 + G 75 -9.6 -2.91239 | overlap 1008106 1008104 TTTATGATATTTTTT GGAGCAGT TGC ACTGCTTC TAATATCTTTTTCTC TERM 671 1008561 - 1008537 - g 70 -4.4 -4.77757 | CTTGAAAAATGAAAA TGTAGAAGTT GAAAA AACTTATACA ATTAACGATGATAAT SYO3AOP1_0976 1008067 - 1009614 + | 60 kDa inner membrane insertion protein TERM 672 1010564 - 1010554 - g 79 -2.6 -5.86465 | AAGAAGATAAAAAAA TTTA TGA TAAA ATTAAAGATAAGCCA TERM 673 1010747 - 1010733 - g 73 -4.3 -5.04175 | GGAATCATAGAAAAA GAAGA TGATC TCTTC ATAAACCTAAGACAA SYO3AOP1_0977 1009611 - 1010954 + | tRNA modification GTPase TrmE SYO3AOP1_0978 1010977 - 1012248 + | transcription termination factor Rho SYO3AOP1_0979 1012491 - 1012793 + | ribosomal protein L31 TERM 674 1013158 - 1013135 - g 77 -3.2 -5.58074 | overlap 1013137 TAACGATGAAAAAAA CGTTATCTTA GAAA TAAGACAAGG GGCAGGTGGAGACGA SYO3AOP1_0980 1012797 - 1013879 + | peptide chain release factor 1 TERM 675 1014463 - 1014493 + F 95 -9.2 -4.9792 | overlap 1014465 ATCAGAGCATTTCTT TTCCTCTTTAAAAA AAT TTTTTAAGGAGGCA TTTTTATGTCAAATC TERM 676 1014465 - 1014491 + F 87 -11.8 -2.74094 | overlap 1014463 CAGAGCATTTCTTTT CCTCTTTAAAAA AAT TTTTTAAGGAGG CATTTTTATGTCAAA SYO3AOP1_0981 1014499 - 1015716 + | DEAD/DEAH box helicase domain protein SYO3AOP1_0982 1015990 - 1016874 + | Protein-disulfide isomerase-like protein TERM 677 1016925 - 1016944 + G 84 -6.4 -5.30616 | GAAAATCAAGTTATA GAGGCTCT GAAA GGAGTCTC TTTTTCTTTAAATAA SYO3AOP1_0983 1016871 - 1017653 + | ABC transporter related TERM 678 1017637 - 1017655 + F 83 -6.8 -4.93318 | TATCATCAAGAATTT TTTTGGGA GTG TCCTAAAA TTTTTGTAAGTTGTA TERM 679 1017783 - 1017766 - f 71 -8.5 -2.85446 | CAGAAAGTGAGTAGA GGCAATT CATG AATTGCC CGTACAGTGAATAAG SYO3AOP1_0984 1017929 - 1019341 + | ribonuclease, Rne/Rng family TERM 680 1019874 - 1019859 - g 82 -7.6 -4.47397 | AGAAACATATGAAAA GTATGG AAAG CCATAC TCAGCTTCTGTATAC SYO3AOP1_0985 1019338 - 1020273 + | Tetratricopeptide TPR_2 repeat protein SYO3AOP1_0986 1020283 - 1020645 + | iojap-like protein SYO3AOP1_0987 1020646 - 1021428 + | glutamate racemase SYO3AOP1_0988 1021444 - 1022256 + | pseudouridine synthase TERM 681 1023019 - 1023006 - f 74 -5.3 -4.80882 | opp_overlap 1023006 ATTCTACATTAAAAA GCTTA GGCT TAAGC TATTCAAACAACATA TERM 682 1025519 - 1025497 - g 79 -3.5 -5.61824 | GAAAATGGAAAAAAA TATCTAAGA AAAAG TCTGAGATA TATAAACAAGTTTTT SYO3AOP1_0991 1024822 - 1026303 + | glycosyl transferase family 2 SYO3AOP1_0992 1026352 - 1027209 + | flagellin domain protein TERM 683 1027227 - 1027245 + F 100 -12.4 -5.86609 | opp_overlap 1027227 ATTTATAATATTAAA CCTGGGGT TTT GCCCCAGG TTTTTATTTTTTTAA TERM 684 1027245 - 1027227 - f 100 -11.7 -3.9749 | opp_overlap 1027227 ATTTATAATATTAAA CCTGGGG TTTTG CCCCAGG TTTTTATTTTTTTAA SYO3AOP1_0993 1027339 - 1027743 + | flagellar protein FlaG protein SYO3AOP1_0994 1027889 - 1029193 + | flagellar hook-associated 2 domain protein TERM 685 1029346 - 1029334 - gf 72 -4.9 -4.75967 | AAGTATAAAAAATAA TGATT TAA AATCA AAAATTAATCACATA SYO3AOP1_0995 1029209 - 1029574 + | flagellar protein FliS SYO3AOP1_0996 1029547 - 1029864 + | SMC domain protein SYO3AOP1_0997 1031163 - 1030423 - | 3-deoxy-D-manno-octulosonate cytidylyltransferase SYO3AOP1_0998 1033183 - 1031165 - | 4-alpha-glucanotransferase SYO3AOP1_0999 1035209 - 1033185 - | glycoside hydrolase family 57 TERM 686 1034424 - 1034438 + g 77 -4.3 -5.24531 | opp_overlap 1034414, overlap 1034414 1034422 AGAACCTTCGGCCGG CCAAA GTCCA TTTGG TTTTTTATCAAAAAT TERM 687 1034625 - 1034636 + g 71 -2.2 -5.34555 | AATCTCAATCTTTCC TTCG CTTT CGAG TTTTTTGTAATATGG SYO3AOP1_1000 1036129 - 1035206 - | hypothetical protein SYO3AOP1_1001 1038619 - 1036133 - | Nucleotidyl transferase TERM 688 1037211 - 1037223 + g 71 -7.7 -3.48024 | overlap 1037209 CTGAAATGTACTCCA CCGAT CGC ATCGG TATTTGATAGTAAAA TERM 689 1037405 - 1037393 - G 74 -7.7 -3.76607 | opp_overlap 1037393 1037395 TAATATAGACCCAAA GCTTG CAG CAAGC TTGGCTGCCATTTCA TERM 690 1039435 - 1039407 - g 100 -11.9 -4.34859 | ACTAAAAGAGACAAA GATTGTATGGATA AAC TATCCACACAACC CAACCGGAGCAGTAG TERM 691 1039853 - 1039828 - g 81 -4.1 -5.63517 | overlap 1039830 TTCTTAAATAAAAAA GGTTTTGAATA TCTG TATCCAAAAGC CACTTTTTATATTTG SYO3AOP1_1002 1038910 - 1040070 + | aminotransferase class I and II TERM 692 1040616 - 1040626 + G 93 -6.8 -5.38326 | TCTATTCTTCTACTT CCGA TAA TCGG TTTTTATTTCATTAA SYO3AOP1_1003 1040073 - 1040762 + | hypothetical protein SYO3AOP1_1004 1041894 - 1040713 - | polysaccharide biosynthesis protein TERM 693 1041020 - 1041009 - G 77 -4.4 -5.25772 | overlap 1041003 AAAGCATAAGAAAAA TAGG TTTT CCTA AAATCAAAGTTCCAA SYO3AOP1_1005 1042960 - 1041887 - | glycosyl transferase group 1 TERM 694 1042109 - 1042127 + g 70 -7.4 -3.61178 | opp_overlap 1042099, overlap 1042101 TCTAAGCTCTGGGAT GTCTGAGA CTA TCACAGAC TTTCCCATAGATGCA TERM 695 1042563 - 1042553 - G 100 -6.8 -5.79595 | opp_overlap 1042552 1042553 TTCTAAAAGAAAAAA TGGG ACG CCCA ATATATTGTATTTTT SYO3AOP1_1006 1043685 - 1042957 - | Methyltransferase type 11 SYO3AOP1_1007 1044388 - 1043672 - | Dolichyl-phosphate beta-D-mannosyltransferase SYO3AOP1_1008 1045446 - 1044385 - | glycosyl transferase group 1 SYO3AOP1_1009 1046045 - 1045443 - | hypothetical protein SYO3AOP1_1010 1047958 - 1046054 - | hypothetical protein SYO3AOP1_1011 1048353 - 1047943 - | hypothetical protein SYO3AOP1_1012 1048897 - 1048433 - | fimbrial protein SYO3AOP1_1013 1049482 - 1048979 - | hypothetical protein SYO3AOP1_1014 1050366 - 1049437 - | hypothetical protein SYO3AOP1_1015 1050998 - 1050363 - | hypothetical protein SYO3AOP1_1016 1051480 - 1050989 - | hypothetical protein SYO3AOP1_1017 1055277 - 1051465 - | Tfp pilus assembly protein tip-associated adhesin PilY1-like protein TERM 696 1053046 - 1053023 - G 90 -9.6 -4.183 | opp_overlap 1053035, overlap 1053035 CCAAGTCTGAAGAAA TGGAGCATAC CATC GTTTGCTCCA ACGATAATTCTTGAC SYO3AOP1_1018 1055576 - 1055280 - | hypothetical protein SYO3AOP1_1019 1056788 - 1055847 - | flagellar hook-associated protein 3 SYO3AOP1_1020 1057229 - 1057957 + | protein of unknown function DUF218 SYO3AOP1_1021 1058539 - 1057937 - | hypothetical protein SYO3AOP1_1022 1058877 - 1058539 - | protein of unknown function DUF190 SYO3AOP1_1023 1059262 - 1058888 - | CrcB protein SYO3AOP1_1024 1060418 - 1059576 - | lipoic acid synthetase TERM 697 1060365 - 1060324 - G 83 -11 -2.82742 | opp_overlap 1060324, overlap 1060321 ATGTTTGGACAATTA GCCTCCTCGCAAACTG TGTGTAGGTT CAGTCTGCGAAGAAGC TTTTTGATTTTAAAT TERM 698 1060324 - 1060365 + g 73 -4.4 -5.10154 | opp_overlap 1060324 1060321 ATGTTTGGACAATTA GCCTCCTCGCAAACTG TGTGTAGGTT CAGTCTGCGAAGAAGC TTTTTGATTTTAAAT SYO3AOP1_1025 1061687 - 1060419 - | Glycine hydroxymethyltransferase TERM 699 1060806 - 1060821 + g 79 -4.7 -5.1675 | TGCCATTAGCTCTTC TGCCA ATGCTC TGGCA TTTTTTACTACCTGC SYO3AOP1_1026 1062149 - 1061703 - | ribose 5-phosphate isomerase B TERM 700 1063222 - 1063238 + G 79 -6.7 -4.62069 | CAAAGGGGTAGATTT TATCTTT AAT AAAGATA TTTTTAAACTAGACC SYO3AOP1_1027 1062623 - 1064017 + | ErfK/YbiS/YcfS/YnhG family protein SYO3AOP1_1028 1064021 - 1065385 + | adenosylmethionine-8-amino-7-oxononanoate aminotransferase SYO3AOP1_1029 1065401 - 1066228 + | protein of unknown function DUF191 TERM 701 1066309 - 1066287 - g 84 -10 -3.43689 | overlap 1066292 GAAATATATATAATA CTAAATGAAG TAG CTTCACTTAG CCAATCAGAAGTAAT SYO3AOP1_1030 1066242 - 1066712 + | response regulator receiver protein SYO3AOP1_1031 1066714 - 1067058 + | TOPRIM domain protein TERM 702 1067410 - 1067389 - f 75 -9.5 -2.87132 | CCCTCCTCTTACATA CGGGCAATT CATG AATTGCCCA ATATCCATCAACCTC SYO3AOP1_1032 1067546 - 1068304 + | imidazoleglycerol phosphate synthase, cyclase subunit SYO3AOP1_1033 1068306 - 1069889 + | 2-isopropylmalate synthase/homocitrate synthase family protein SYO3AOP1_1034 1070059 - 1070997 + | hypothetical protein SYO3AOP1_1035 1071060 - 1071632 + | hypothetical protein TERM 703 1072191 - 1072175 - g 82 -10.9 -2.58861 | overlap 1072174 GATGATTTTTATAAT CGTTGGA ACG TCCAACG CGGTAAATTTAACAG TERM 704 1072494 - 1072479 - g 76 -6.2 -4.58466 | TCTATAATTACAAAA CAAGAA CTAA TTCTTG CAGTCGTAGGAGGTA SYO3AOP1_1036 1071642 - 1072709 + | phospho-N-acetylmuramoyl-pentapeptide-transferase SYO3AOP1_1037 1075260 - 1072936 - | peptidase S16 lon domain protein SYO3AOP1_1038 1077227 - 1075260 - | multi-sensor signal transduction histidine kinase TERM 705 1075312 - 1075292 - G 80 -9.1 -3.57674 | overlap 1075290 ACTCTATTACAAATA TACCACCTT CAG AAGATGGTA CTGCATAGATTTTAC TERM 706 1076601 - 1076620 + g 72 -3.6 -5.13722 | overlap 1076596 TTTCTGATTTGTTTT TAGTTTAC CATT GAAAACTA TTTTATTTTCATAAA SYO3AOP1_1039 1077991 - 1077224 - | citrate synthase TERM 707 1077574 - 1077586 + g 72 -3.3 -5.18726 | overlap 1077575 ACTTATGTCCATAGC CGGAG ATT CTCCA TTTTTCTTCTACAGC TERM 708 1078097 - 1078112 + r 74 -6.2 -4.51699 | opp_overlap 1078097 1078096 TTTGCTCAGAACAAC GGAATA AGAT TATTCC TTTTCTGATGCTTAT SYO3AOP1_1040 1078853 - 1078218 - | HAD-superfamily hydrolase, subfamily IA, variant 3 TERM 709 1078544 - 1078559 + g 85 -4.8 -5.60864 | overlap 1078538 CAACTGCAACTTTTT TTGAAA GCTC TTTCAA TTTTTTTAATGTCTC SYO3AOP1_1041 1079242 - 1078850 - | Septum formation initiator TERM 710 1079216 - 1079197 - G 100 -11.4 -4.94058 | GTAATGTAAATAAAA CCGTGAGC TTAA GCCCACGG TCTAAAACTTTATGT SYO3AOP1_1042 1080518 - 1079232 - | Phosphopyruvate hydratase TERM 711 1080463 - 1080443 - G 75 -8.3 -3.61715 | opp_overlap 1080441 1080446, overlap 1080446 CACCGCTTTCAAGAA CAGCAGTAG CTT CTACTGTTG GATTTCCCCTTGAAT TERM 712 1080446 - 1080460 + g 74 -8.6 -3.29211 | opp_overlap 1080446 1080443, overlap 1080441 CGCTTTCAAGAACAG CAGTAG CTT CTACTG TTGGATTTCCCCTTG SYO3AOP1_1043 1081962 - 1080532 - | Carbamoyl-phosphate synthase L chain ATP-binding TERM 713 1080802 - 1080788 - G 76 -8.6 -3.43919 | opp_overlap 1080798, overlap 1080786 GTTAAAGCCCAAACA GATAGC TTA GCTATC ATAGAATCATAGTAT TERM 714 1081172 - 1081195 + g 74 -7.6 -3.89787 | gap 1, opp_overlap 1081171, overlap 1081189 CCAACTTTAAACATT GCTTTAACAGA AGT TCTGT-AAAGC TCTTTCTTTACTTCT TERM 715 1081978 - 1081991 + r 77 -3.9 -5.49729 | TACCTTCATGTATTC TTTCT TTGA AGAAA TTTTTTTAACTGATT SYO3AOP1_1044 1083259 - 1082024 - | aspartate kinase TERM 716 1083164 - 1083176 + g 95 -4.8 -6.17033 | TACGACTTTATTCCC GGCA TCTAC TGCC TTTTTTATTTTTTTT SYO3AOP1_1045 1085163 - 1083739 - | Polynucleotide adenylyltransferase region SYO3AOP1_1046 1085600 - 1085166 - | hypothetical protein SYO3AOP1_1047 1086302 - 1085796 - | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen TERM 717 1086409 - 1086436 + r 87 -7.8 -4.74653 | overlap 1086414 TCTCACTCATTTATT GTATGGGCAATT CATG AATTGCCTCTAC TTTCTTTCTTGCTTT TERM 718 1086414 - 1086431 + r 72 -8.5 -3.17318 | overlap 1086409 CTCATTTATTGTATG GGCAATT CATG AATTGCC TCTACTTTCTTTCTT TERM 719 1086538 - 1086559 + r 72 -7.4 -3.92522 | ACTCTCTAATCCTCA TTCTCACA TCTTTT TGTGAGAA TTTATCAAATTCAAA SYO3AOP1_1048 1087104 - 1086541 - | GTP cyclohydrolase I SYO3AOP1_1049 1087536 - 1087120 - | CoA-binding domain protein SYO3AOP1_1050 1088856 - 1087540 - | MiaB-like tRNA modifying enzyme TERM 720 1088175 - 1088185 + g 70 -4 -5.02074 | TGTATAGATTTTCTA TCTT GAC AAGA TTTTTTAAAAGGTCA SYO3AOP1_1051 1089487 - 1088840 - | hypothetical protein SYO3AOP1_1052 1090036 - 1090929 + | glycyl-tRNA synthetase, alpha subunit TERM 721 1092335 - 1092321 - g 70 -4.3 -4.82901 | TTTCTTTCATAAAAA TTGGA GAGCT TCCAA AACCATCAGCCGACC TERM 722 1092883 - 1092871 - g 82 -7.7 -4.51654 | overlap 1092868 AAAACTTAAAAATAA CAGAC TAA GTCTG CTGAAAGAAATCAAC SYO3AOP1_1053 1090910 - 1092946 + | glycyl-tRNA synthetase, beta subunit TERM 723 1094805 - 1094793 - g 70 -4.1 -4.9645 | overlap 1094794 ACCAGAAGAAGAAAA CCCAA TGA TTGGA TTCAGAGGAGCTTCA SYO3AOP1_1054 1092952 - 1095381 + | phosphoenolpyruvate synthase TERM 724 1095394 - 1095414 + T 100 -6.8 -5.89827 | opp_overlap 1095394, overlap 1095395 TAACTATAAATGACA CGGAGACC TAAAC GGTCTCCA TTTTTTTTAATAATT TERM 725 1095414 - 1095394 - T 74 -9 -3.08526 | opp_overlap 1095394 1095395 TAACTATAAATGACA CGGAGACC TAAAC GGTCTCCA TTTTTTTTAATAATT TERM 726 1095395 - 1095413 + T 91 -10.3 -4.11456 | opp_overlap 1095394, overlap 1095394 AACTATAAATGACAC GGAGACC TAAAC GGTCTCC ATTTTTTTTAATAAT TERM 727 1095839 - 1095816 - T 89 -11 -3.59372 | overlap 1095814 1095818 TGAATTTAAACAAGA CAGGGCAGGA TTAA TCCTGCCCCA GAGATTTATATGTTA TERM 728 1095837 - 1095818 - T 100 -13.6 -3.36326 | overlap 1095816 1095814 AATTTAAACAAGACA GGGCAGGA TTAA TCCTGCCC CAGAGATTTATATGT SYO3AOP1_1055 1097702 - 1095852 - | ATP-citrate lyase/succinyl-CoA ligase TERM 729 1096500 - 1096514 + g 74 -4.2 -5.27335 | overlap 1096502 ATCTATAAATTTAGA TGCCCA ATC TGGGAA TTTTTGTTTAAACCA TERM 730 1096941 - 1096959 + g 73 -4.6 -5.06103 | opp_overlap 1096929 1096933 1096925 1096927 ACACCAACCAATGAC TGGTTTAG TGA TTAAGCCA TTTTTTACAGCTTCT SYO3AOP1_1056 1099027 - 1097720 - | ATP citrate synthase, subunit 1 TERM 731 1099109 - 1099096 - R 78 -2.3 -5.79595 | CGCCAAAATAAAAAA CACCC CAGC AGGCG GTAATTATGATTTTA TERM 732 1099471 - 1099498 + r 87 -7.8 -4.84182 | opp_overlap 1099470, overlap 1099476 TCTCACTTATTCAAT GTACGGGCAATT CATT AATTGCCTTTAC TTTCTTGTTTTTTAA TERM 733 1099476 - 1099493 + r 87 -8.5 -4.28187 | opp_overlap 1099470, overlap 1099471 CTTATTCAATGTACG GGCAATT CATT AATTGCC TTTACTTTCTTGTTT SYO3AOP1_1057 1101345 - 1099621 - | single-stranded-DNA-specific exonuclease RecJ SYO3AOP1_1058 1101593 - 1101345 - | hypothetical protein SYO3AOP1_1059 1102277 - 1101633 - | protein of unknown function UPF0153 SYO3AOP1_1060 1102662 - 1102291 - | centrosomal protein 63kDa SYO3AOP1_1061 1102931 - 1103503 + | translation elongation factor P SYO3AOP1_1062 1103541 - 1104008 + | acetyl-CoA carboxylase, biotin carboxyl carrier protein TERM 734 1104174 - 1104160 - g 70 -7.2 -3.60818 | opp_overlap 1104160 TTAAAAGGTTTTAAA GGAATA GTT TATTCC TGTGATGTATCAACA SYO3AOP1_1063 1104013 - 1104951 + | ADP-L-glycero-D-manno-heptose-6-epimerase SYO3AOP1_1064 1104944 - 1105855 + | homoserine kinase TERM 735 1105934 - 1105902 - f 79 -5 -5.16681 | gap 1, overlap 1105904 1105909 TTAAAAATAAGAAAA GATGTAAGGGCGATT CATG AATCGCCCTCA-ATA ATAAGATACTGAAAG TERM 736 1105932 - 1105904 - f 80 -7.6 -4.17151 | gap 1, overlap 1105902 1105909 AAAAATAAGAAAAGA TGTAAGGGCGATT CATG AATCGCCCTCA-A TAATAAGATACTGAA TERM 737 1105928 - 1105909 - f 90 -12.2 -3.32579 | overlap 1105904 1105902 TAAGAAAAGATGTAA GGGCGATT CATG AATCGCCC TCAATAATAAGATAC TERM 738 1106054 - 1106030 - f 95 -12.3 -3.62522 | opp_overlap 1106021 1106024 1106027 GAAGCCGGCGAAGAA TCTCCTTCCTT TTT AAGAAAGGAGA CCCTTTGGACTAAAG SYO3AOP1_1065 1106121 - 1107359 + | hypothetical protein TERM 739 1107876 - 1107864 - g 79 -2.7 -5.7827 | overlap 1107857 AATACAAAGAAAAAA CTTTC ATT AAAAG CATTTAGACATACAG SYO3AOP1_1066 1107360 - 1108898 + | phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase TERM 740 1109503 - 1109493 - g 76 -5.4 -5.02287 | CATAAAAATACAAAA GACT TAA AGTC TCATACACTTAAAGC SYO3AOP1_1067 1108911 - 1109768 + | Methenyltetrahydrofolate cyclohydrolase SYO3AOP1_1068 1110582 - 1110046 - | hypothetical protein TERM 741 1110188 - 1110201 + g 71 -6.7 -4.11692 | overlap 1110185 CAATGCTCAATTGGT CCAAG TCCT CTTGG TTTTAAAGCTCCCTC SYO3AOP1_1071 1112726 - 1112586 - | hypothetical protein SYO3AOP1_1072 1112964 - 1112716 - | hypothetical protein TERM 742 1113599 - 1113583 - R 100 -10.1 -5.46698 | opp_overlap 1113582 1113581 TTTAAAATCAAAAAA CCCTCCC ATT AGGAGGG CATTATAATTAATTA SYO3AOP1_1073 1115039 - 1113612 - | glutamine synthetase, type I SYO3AOP1_1074 1115418 - 1115080 - | nitrogen regulatory protein P-II SYO3AOP1_1075 1117138 - 1115711 - | Aldehyde Dehydrogenase TERM 743 1117508 - 1117482 - R 78 -9.4 -3.37245 | opp_overlap 1117483, overlap 1117483 GTATTTCAAGAGGAA CCCCCACCAGCT TAA AACTGGCAGGGA TTTAGATATTAATGA TERM 744 1117507 - 1117483 - R 80 -10.7 -2.62026 | opp_overlap 1117483, overlap 1117482 TATTTCAAGAGGAAC CCCCACCAGCT TAA AACTGGCAGGG ATTTAGATATTAATG SYO3AOP1_1076 1118554 - 1117517 - | cytochrome d ubiquinol oxidase, subunit II SYO3AOP1_1077 1120091 - 1118556 - | cytochrome bd ubiquinol oxidase subunit I TERM 745 1119603 - 1119619 + g 72 -5.9 -4.36914 | overlap 1119605 CTCTGCTCTAATTCC TTGTTGA GTT TCAACGA TTTTATAACCAGCAG SYO3AOP1_1078 1120510 - 1120974 + | Dinitrogenase iron-molybdenum cofactor biosynthesis protein SYO3AOP1_1079 1121374 - 1122756 + | hypothetical protein SYO3AOP1_1080 1122749 - 1123204 + | hypothetical protein SYO3AOP1_1081 1123266 - 1125074 + | type II and III secretion system protein TERM 746 1125108 - 1125125 + F 100 -8.4 -5.65496 | AGAAAATTTTTTATG GGTGGC TTAAGT GCCACC TTTTTATTTTTAATA SYO3AOP1_1082 1125372 - 1126049 + | hypothetical protein SYO3AOP1_1083 1126049 - 1126663 + | hypothetical protein SYO3AOP1_1084 1126667 - 1127101 + | ferric uptake regulator, Fur family SYO3AOP1_1085 1127098 - 1127751 + | phage SPO1 DNA polymerase-related protein TERM 747 1128278 - 1128260 - g 70 -4.6 -4.74598 | CAAACGGAAAAGAAA GTACTTTT TGG AGAAGTAC TAGAAAAGATTTTGA SYO3AOP1_1086 1127753 - 1128919 + | methyltransferase small SYO3AOP1_1087 1129461 - 1132280 + | isoleucyl-tRNA synthetase SYO3AOP1_1088 1132277 - 1132576 + | histone family protein DNA-binding protein TERM 748 1132596 - 1132558 - g 76 -3.3 -5.48303 | AGAAGGTGAAAAAAA TGCAAAATCCAAAAAAT GATTT ATTTTTAAGAGCTTGCA GAAGACAAAAAGTAG SYO3AOP1_1089 1132557 - 1133603 + | uroporphyrinogen decarboxylase TERM 749 1133685 - 1133662 - g 80 -6 -5.12474 | opp_overlap 1133662, overlap 1133664 TAGAAGATATAAAAA GGCTATTACC GGTC GGCAATAGAC TTATAGAGCCTTTTG SYO3AOP1_1090 1133604 - 1134398 + | DNA adenine methylase SYO3AOP1_1091 1134395 - 1134601 + | hypothetical protein SYO3AOP1_1092 1134698 - 1135156 + | SsrA-binding protein TERM 750 1135323 - 1135305 - g 70 -7.4 -3.72141 | AGACCCATACTTAAA CATAGACC CGG GGACTATG AACCCATACCAACAT TERM 751 1136151 - 1136139 - g 70 -6.3 -4.29472 | CAAAGTAAAAGTAAA TATCC ATT GGATA AACTCTGAAAAGATA SYO3AOP1_1093 1135171 - 1136772 + | CTP synthase SYO3AOP1_1094 1136802 - 1137965 + | acetylornithine and succinylornithine aminotransferase TERM 752 1138571 - 1138557 - g 75 -5 -5.00467 | GGAAGAATAATAAAA GACCTT GGA AAAGTC AAAAACACCCAAACT SYO3AOP1_1095 1137966 - 1140071 + | ribonuclease R TERM 753 1140239 - 1140219 - f 72 -3.3 -5.26875 | overlap 1140220 TTTTTAATCAAAAAA TCAAAAGAT GAG ATCCTTTGG CCTTCGTCCTCAGAT SYO3AOP1_1096 1140615 - 1141127 + | Thioredoxin-related protein SYO3AOP1_1097 1141124 - 1141540 + | molybdopterin biosynthesis MoaE protein SYO3AOP1_1098 1141545 - 1142861 + | gid protein SYO3AOP1_1099 1144292 - 1143222 - | peptidase M24 TERM 754 1143550 - 1143565 + g 75 -4.8 -5.07107 | TTTAAATGAGCTTCT TTTACA ATGT TGTAAA TTTTTTCAAACTTTG SYO3AOP1_1101 1145787 - 1145239 - | DJ-1 family protein SYO3AOP1_1102 1147205 - 1145805 - | amidophosphoribosyltransferase SYO3AOP1_1103 1147800 - 1147273 - | phosphoesterase PA-phosphatase related SYO3AOP1_1104 1148833 - 1147790 - | phosphoesterase PHP domain protein SYO3AOP1_1105 1151612 - 1149213 - | ATP-dependent DNA helicase RecG SYO3AOP1_1106 1151811 - 1151587 - | hypothetical protein SYO3AOP1_1107 1152300 - 1151815 - | 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase SYO3AOP1_1108 1153133 - 1152291 - | ATP-NAD/AcoX kinase TERM 755 1153328 - 1153300 - H 88 -8.9 -4.23486 | overlap 1153297 1153301 AATTACTCAAAATAA TCCACCTATACTA TAA TAGTATAGGAGGT AAAACATAAATTTAG TERM 756 1153327 - 1153301 - H 90 -12.4 -3.13007 | overlap 1153300 1153297 ATTACTCAAAATAAT CCACCTATACTA TAA TAGTATAGGAGG TAAAACATAAATTTA TERM 757 1154561 - 1154581 + H 81 -4.1 -5.66684 | opp_overlap 1154566, overlap 1154564 CACTGTGGATCTGTT TAATACTTT TTC AAAGTATTC TTTTTTTATCCATTA TERM 758 1154564 - 1154578 + H 78 -5.8 -4.89054 | opp_overlap 1154566, overlap 1154561 TGTGGATCTGTTTAA TACTTT TTC AAAGTA TTCTTTTTTTATCCA SYO3AOP1_1110 1155073 - 1155504 + | hypothetical protein SYO3AOP1_1111 1156669 - 1155863 - | ABC-3 protein SYO3AOP1_1112 1157445 - 1156666 - | ABC transporter related SYO3AOP1_1113 1158467 - 1157442 - | Alcohol dehydrogenase zinc-binding domain protein SYO3AOP1_1114 1158861 - 1158496 - | hypothetical protein SYO3AOP1_1115 1158935 - 1159606 + | transcriptional regulator, IclR family TERM 759 1160766 - 1160741 - g 75 -2.7 -5.70522 | gap 1, opp_overlap 1160741 1160745 AAGAATAATAAAAAA CCAATGA-AGAT AGT ATCTCTCATTTG CTTTGAGTCTATCTT SYO3AOP1_1116 1159610 - 1161151 + | apolipoprotein N-acyltransferase TERM 760 1162692 - 1162680 - g 88 -9.1 -4.15664 | overlap 1162669 1162668 AAAGTTAGACAGAAA CGGTC TAA GACCG GCAAGGTACATAATT SYO3AOP1_1117 1161625 - 1166031 + | Glutamate synthase (ferredoxin) SYO3AOP1_1118 1166293 - 1166835 + | nuclease (SNase domain protein) SYO3AOP1_1119 1166839 - 1167561 + | signal peptidase I SYO3AOP1_1120 1168816 - 1167830 - | transposase IS116/IS110/IS902 family protein SYO3AOP1_1121 1169801 - 1169205 - | dephospho-CoA kinase SYO3AOP1_1122 1171223 - 1169988 - | transposase mutator type TERM 761 1172538 - 1172562 + G 90 -10.1 -4.12532 | opp_overlap 1172538 1172536 1172539, overlap 1172539 ATGGAGCTAAGAATA TTCTCAAGAGA AGT TCTCTTGGGAG TTTATATCTGACAAA TERM 762 1172539 - 1172561 + G 87 -11.4 -3.07198 | opp_overlap 1172539 1172538 1172536, overlap 1172538 TGGAGCTAAGAATAT TCTCAAGAGA AGT TCTCTTGGGA GTTTATATCTGACAA TERM 763 1172561 - 1172539 - g 72 -9.2 -2.64872 | opp_overlap 1172538 1172539, overlap 1172538 1172536 TGGAGCTAAGAATAT TCTCAAGAGA AGT TCTCTTGGGA GTTTATATCTGACAA TERM 764 1172650 - 1172693 + G 85 -9.2 -4.12198 | gap 1, opp_overlap 1172660, overlap 1172639 GAGTCCTCCCTTGGA TGTTATCAAAGGTAATCCATA CTT TAAGGATTATCTT-GATAGCA TTTTAAACCCTTGTC SYO3AOP1_1123 1171541 - 1172728 + | transposase, IS605 OrfB family SYO3AOP1_1124 1173808 - 1172771 - | MscS Mechanosensitive ion channel TERM 765 1173741 - 1173719 - G 76 -6.4 -4.58685 | overlap 1173721 AAATGCCTTTAAAAA TCTTAAAGCT GTA AGCCTTAAAA TGTATAAAACAACAA SYO3AOP1_1125 1175087 - 1173801 - | Histidinol dehydrogenase SYO3AOP1_1126 1175713 - 1175162 - | Chromate transporter TERM 766 1175685 - 1175669 - G 71 -3.1 -5.29846 | AAGTTCAAATAAAAA TTTATCT AAA AAATAAA GGACAAGTAATCCAC SYO3AOP1_1127 1176300 - 1175839 - | Chromate transporter SYO3AOP1_1128 1176729 - 1176559 - | hypothetical protein SYO3AOP1_1129 1177214 - 1176843 - | Carboxymuconolactone decarboxylase SYO3AOP1_1131 1179784 - 1178690 - | outer membrane efflux protein SYO3AOP1_1132 1182866 - 1179762 - | acriflavin resistance protein TERM 767 1181768 - 1181747 - G 70 -4.5 -4.80882 | gap 1, overlap 1181757 ATCCTATACCAAAAA GCCA-CATAA AGG CTATGGTGGC CAAATAAACAAAAGG SYO3AOP1_1133 1184041 - 1182866 - | efflux transporter, RND family, MFP subunit TERM 768 1184198 - 1184212 + H 71 -2.9 -5.22006 | TTGTATAATGTACAT GTAAA ATGAG TTTAC TTTTTCTTGTCATCC SYO3AOP1_1134 1184425 - 1185354 + | Rubrerythrin TERM 769 1185361 - 1185343 - T 85 -6.7 -5.09225 | opp_overlap 1185343, overlap 1185346 AGTTTATTTAAAAAA GGAGCTA AATAG CAGCTCC TTTTAGCACATTTTC SYO3AOP1_1135 1186186 - 1185347 - | methylthioadenosine phosphorylase SYO3AOP1_1136 1186906 - 1186196 - | protein of unknown function DUF164 TERM 770 1186459 - 1186481 + g 76 -6.4 -4.64157 | CTAATTGAGTTTTTT TGGAATTTAG AGT CTGAATTTCA TTTTCTAATTCTTTA SYO3AOP1_1137 1187102 - 1188016 + | Lytic transglycosylase catalytic TERM 771 1188572 - 1188556 - g 71 -3.1 -5.28315 | opp_overlap 1188548 1188557, overlap 1188548 1188557 AGAAAAGTTAAAAAA CTTTAAA TCT TTTAAAA TTCCTGTAAATCCAA SYO3AOP1_1138 1188530 - 1189372 + | hypothetical protein TERM 772 1189558 - 1189545 - g 74 -5.3 -4.77775 | ACTTTACAAAATAAA TGTCT TGAT AGACA ACGCTTCAATCCATA SYO3AOP1_1139 1189369 - 1190145 + | phospholipid/glycerol acyltransferase TERM 773 1190602 - 1190586 - g 70 -4.5 -4.88736 | TATGACTTACAAAAA GATAAAA AAA TCTTATC ACCGGTTTTAAGCTT SYO3AOP1_1140 1190130 - 1190819 + | deacetylase-like protein TERM 774 1191218 - 1191180 - g 73 -8.4 -3.49818 | overlap 1191190 1191214 AGAAAGAAAATTCAA GATAATATAATCTTAGAA AAG TTCTTAGATCAAATTATC AAAATTTAACAAAAC SYO3AOP1_1141 1190949 - 1191227 + | hypothetical protein SYO3AOP1_1144 1193606 - 1193842 + | hypothetical protein SYO3AOP1_1145 1193839 - 1194960 + | glycosyl transferase group 1 TERM 775 1195108 - 1195090 - g 79 -8.8 -3.7829 | overlap 1195093 AGGATATTTATGAAA CTACCAGC AAA GCTGGTGG AGATAGTATCTCAAA TERM 776 1195105 - 1195093 - g 73 -9.1 -2.97934 | overlap 1195090 ATATTTATGAAACTA CCAGC AAA GCTGG TGGAGATAGTATCTC SYO3AOP1_1146 1195084 - 1195632 + | protein of unknown function DUF507 SYO3AOP1_1147 1195658 - 1196287 + | 1-acyl-sn-glycerol-3-phosphate acyltransferase SYO3AOP1_1148 1196280 - 1197146 + | hydroxymethylbutenyl pyrophosphate reductase SYO3AOP1_1149 1197139 - 1198836 + | RNA binding S1 domain protein SYO3AOP1_1150 1198836 - 1199837 + | sodium/calcium exchanger membrane region SYO3AOP1_1151 1199839 - 1200783 + | acetyl-CoA carboxylase, carboxyl transferase, alpha subunit SYO3AOP1_1152 1201223 - 1201828 + | phosphoglycerate mutase 1 family SYO3AOP1_1153 1201825 - 1202577 + | Triose-phosphate isomerase SYO3AOP1_1154 1202581 - 1202874 + | preprotein translocase, SecG subunit SYO3AOP1_1155 1202874 - 1204118 + | MgtC/SapB transporter SYO3AOP1_1156 1204820 - 1204098 - | protein of unknown function DUF72 SYO3AOP1_1157 1205470 - 1204817 - | dethiobiotin synthase SYO3AOP1_1158 1206368 - 1205463 - | malonyl CoA-acyl carrier protein transacylase TERM 777 1205746 - 1205759 + g 84 -5.3 -5.45802 | TCTTCAATATACTTG GCAAA TTCC TTTGC TTTTTCTTTTAAAAG SYO3AOP1_1159 1206561 - 1207007 + | heat shock protein Hsp20 TERM 778 1207044 - 1207060 + F 100 -9.4 -6.23317 | opp_overlap 1207044 ATAAATAACATTGAA GTCCCC TTAAC GGGGAC TTTTTTTGTTTTTCT TERM 779 1207060 - 1207044 - f 78 -9.4 -3.27213 | opp_overlap 1207044 ATAAATAACATTGAA GTCCCC TTAAC GGGGAC TTTTTTTGTTTTTCT TERM 780 1207334 - 1207323 - g 70 -4.4 -4.88129 | AAAAATTATGAAAAA GGTA GTTT TACC AATTGCTTTAATTTT SYO3AOP1_1160 1207285 - 1208781 + | protease Do TERM 781 1208804 - 1208824 + G 85 -11.2 -3.26531 | overlap 1208802 ATTTGGAGGAAGTTT TGACCCAG TTCAC CTGGGTCA TCTTCGTATTGCTGA TERM 782 1209056 - 1209068 + G 84 -6.3 -5.31877 | opp_overlap 1209055 CTTTAAAGAAAAGCT TGGAT ATA ATCCA TTTTTTATAGTAGGT SYO3AOP1_1161 1208778 - 1209401 + | nicotinate (nicotinamide) nucleotide adenylyltransferase TERM 783 1209735 - 1209715 - T 100 -15.5 -4.614 | opp_overlap 1209712 TGTAAGTATATAAAA GCCCCCATT TGA AATGGGGGC AAAATTTATTAGTGA SYO3AOP1_1162 1209887 - 1209744 - | hypothetical protein SYO3AOP1_1163 1211335 - 1209914 - | FAD-dependent pyridine nucleotide-disulphide oxidoreductase TERM 784 1211685 - 1211696 + G 71 -2.2 -5.36364 | overlap 1211673 AGACCATAAAGGTTC TCCT ATTT GGGA TTTTTATGTTTTTAA SYO3AOP1_1164 1211506 - 1212414 + | folate-binding protein YgfZ SYO3AOP1_1165 1212407 - 1213369 + | signal transduction histidine kinase, nitrogen specific, NtrB SYO3AOP1_1166 1213376 - 1214755 + | two component, sigma54 specific, transcriptional regulator, Fis family TERM 785 1214804 - 1214816 + F 88 -6.3 -5.38951 | opp_overlap 1214790 ATCGTCATTCTGAGC GAAGA ATC TCTTC TTTTTTCTCTCACTT SYO3AOP1_1167 1215129 - 1215371 + | ribosomal protein S16 SYO3AOP1_1168 1215383 - 1215622 + | hypothetical protein TERM 786 1215632 - 1215651 + T 81 -10 -3.11683 | opp_overlap 1215630 1215629, overlap 1215630 1215629 GAATAAAAAAAGTTT GAGGGTCT AAAA GGACCCTC TATAGTTTTAGATAT SYO3AOP1_1169 1216054 - 1215827 - | hypothetical protein SYO3AOP1_1170 1218432 - 1216051 - | DNA topoisomerase (ATP-hydrolyzing) TERM 787 1219452 - 1219472 + G 74 -3.9 -5.24416 | GACGATGGTAAAGGT CCAAACGCT TCT GGTGTATGG TTTTTCTTATACTTA TERM 788 1219588 - 1219578 - g 85 -6.8 -5.08824 | overlap 1219561 GGGCCAGCTAAAAAA CCAG CTC CTGG AAAGTTTACTGTTAA SYO3AOP1_1171 1219131 - 1220048 + | Rhodanese domain protein TERM 789 1220077 - 1220061 - f 87 -10.8 -3.3903 | opp_overlap 1220056 1220055 TAATTAGTCAATCAA GCCGGC TTTAC GCCGGC TTCACATATTTTTCA SYO3AOP1_1172 1220107 - 1221228 + | hypothetical protein SYO3AOP1_1173 1221241 - 1221390 + | hypothetical protein SYO3AOP1_1174 1221387 - 1221878 + | Rhodanese domain protein TERM 790 1222956 - 1222936 - g 71 -6.9 -4.06687 | overlap 1222937 ATGTTTGATAAAGAA GTCTTCCAT GTT ATGGAAGAA AAAGCACATGGAAAA TERM 791 1222955 - 1222937 - g 83 -10.4 -3.0353 | overlap 1222936 TGTTTGATAAAGAAG TCTTCCAT GTT ATGGAAGA AAAAGCACATGGAAA SYO3AOP1_1175 1221901 - 1224789 + | molydopterin dinucleotide-binding region SYO3AOP1_1176 1224803 - 1225951 + | DMSO reductase family type II enzyme, iron-sulfur subunit SYO3AOP1_1177 1225979 - 1227112 + | cytochrome c class I SYO3AOP1_1178 1227129 - 1227530 + | hypothetical protein TERM 792 1227540 - 1227558 + F 100 -12.4 -5.05782 | overlap 1227541 TTATAAAGTTTTCAA TCCCGGGA TAC TCCCGGGG TTTTTTAAAGTGAAT TERM 793 1227541 - 1227557 + F 100 -13.7 -3.62746 | overlap 1227540 TATAAAGTTTTCAAT CCCGGGA TAC TCCCGGG GTTTTTTAAAGTGAA SYO3AOP1_1179 1228005 - 1228640 + | 4Fe-4S ferredoxin iron-sulfur binding domain protein SYO3AOP1_1180 1228643 - 1229524 + | Polysulphide reductase NrfD TERM 794 1232120 - 1232105 - g 76 -6.2 -4.58303 | opp_overlap 1232105 1232104, overlap 1232111 GGAAATAGGACAAAA CCATAA CCCA TTATGG ATTTATGAAAAAGAT TERM 795 1232241 - 1232269 + G 77 -8.9 -3.28712 | opp_overlap 1232244 1232248, overlap 1232244 ATGGCAACACTAACT CAAGCAACAAGAC CTG GTGTTGTTGCATG TTCTCACCACAACGG TERM 796 1232266 - 1232244 - g 77 -9.2 -3.23979 | opp_overlap 1232241 1232244, overlap 1232248 GCAACACTAACTCAA GCAACAAGAC CTG GTGTTGTTGC ATGTTCTCACCACAA TERM 797 1232244 - 1232266 + G 71 -9.2 -2.52623 | opp_overlap 1232244 1232248, overlap 1232241 GCAACACTAACTCAA GCAACAAGAC CTG GTGTTGTTGC ATGTTCTCACCACAA SYO3AOP1_1181 1229547 - 1232768 + | molybdopterin oxidoreductase TERM 798 1232787 - 1232809 + F 89 -10.6 -3.87967 | opp_overlap 1232786, overlap 1232782 ACTAACCATACACAG GGACAGTCTT AAA GAGGCTGTCC TTATCTTGTTATAAT SYO3AOP1_1182 1233059 - 1233703 + | hypothetical protein SYO3AOP1_1183 1233690 - 1234781 + | 4Fe-4S ferredoxin iron-sulfur binding domain protein TERM 799 1235919 - 1235909 - T 75 -2.6 -5.63517 | opp_overlap 1235909 TTGGGAAAGAAAAAA TAAA GGT TTTA CTTGATAAACTCTGT SYO3AOP1_1185 1237181 - 1235943 - | transposase mutator type SYO3AOP1_1186 1238192 - 1238986 + | transcriptional regulator, IclR family TERM 800 1239188 - 1239175 - T 78 -6.7 -4.3613 | TTGAAAAGAAAAAGA GGTGA TTCT TCACC GGCTGCAGAACGACA TERM 801 1239413 - 1239399 - T 71 -7 -4.08216 | opp_overlap 1239399, overlap 1239387 GCATGCGGCTGAAAA CCGCAG TGT CGGCGG TTCGATTCCGCCCTT SYO3AOP1_1187 1239912 - 1239439 - | 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase SYO3AOP1_1188 1240144 - 1239905 - | hypothetical protein SYO3AOP1_1189 1241048 - 1240155 - | integrase family protein SYO3AOP1_1190 1241614 - 1241045 - | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase SYO3AOP1_1191 1241896 - 1242384 + | histidine triad (HIT) protein SYO3AOP1_1192 1242374 - 1242673 + | hypothetical protein SYO3AOP1_1193 1243425 - 1242778 - | Methyltransferase type 11 SYO3AOP1_1194 1243991 - 1243431 - | hypothetical protein TERM 802 1244101 - 1244128 + H 100 -12.8 -3.15366 | overlap 1244099 GACAACTTTACTTTC GTAAGGGCGATT CATG AATCGCCCCTAC TCTTCCACTTTTCCA SYO3AOP1_1195 1244275 - 1245528 + | seryl-tRNA synthetase SYO3AOP1_1196 1245771 - 1246445 + | polysaccharide deacetylase SYO3AOP1_1197 1246427 - 1247530 + | glycosyl transferase group 1 TERM 803 1248077 - 1248063 - gf 85 -2.8 -6.28401 | overlap 1248065 1248066 GAAAAAAGAAAAAAA TACTCT CAA AGAGTT CAAGAATCAGCAGGA TERM 804 1248075 - 1248065 - gf 71 -5.4 -4.70159 | overlap 1248063 1248066 AAAAAGAAAAAAATA CTCT CAA AGAG TTCAAGAATCAGCAG SYO3AOP1_1198 1247517 - 1249187 + | ABC transporter related TERM 805 1249557 - 1249545 - gf 82 -4.9 -5.33785 | AAGGATTATAAAAAA GTATT ATA AATAC GCTGATTTAATAGTA TERM 806 1249986 - 1250000 + GF 76 -8.6 -3.44284 | opp_overlap 1249985 1249986, overlap 1249991 AACTTTAGAAGCAAT GGCTTT AGG AAAGCC TGTTATTAGTACAAA SYO3AOP1_1199 1249162 - 1250232 + | glycosyl transferase group 1 TERM 807 1251121 - 1251111 - g 74 -4 -5.24003 | AAGAAAAAGTAAAAA TTCT AAC AGAA TACAATTTATCGAAA SYO3AOP1_1200 1250225 - 1251184 + | glycosyl transferase family 2 SYO3AOP1_1201 1252419 - 1251355 - | ADP-heptose:LPS heptosyltransferase-like protein TERM 808 1251629 - 1251639 + g 75 -2.6 -5.626 | GTAATTTCTTTATGT TTTA AAC TAAA TTTTTTTATAAAATC TERM 809 1252041 - 1252055 + g 86 -7.2 -4.89567 | GAAAAACTTCATTTA TTCCTA AGG TAGGAA TTTTGTATTTTAACC SYO3AOP1_1202 1253530 - 1252403 - | Citrate (Si)-synthase TERM 810 1252781 - 1252792 + g 70 -4.4 -4.86133 | GCCGGGAATTTTTTT CTTG CTTT CAAG TTTTTCATCTATATA SYO3AOP1_1203 1254385 - 1253540 - | RNA polymerase, sigma 70 subunit, RpoD family SYO3AOP1_1204 1255040 - 1254462 - | hypothetical protein SYO3AOP1_1205 1255416 - 1256402 + | transposase IS116/IS110/IS902 family protein TERM 811 1256493 - 1256476 - f 72 -8.5 -3.17289 | opp_overlap 1256468, overlap 1256468 1256472 GAGAAAGTGAATAGA GGCAATT CATG AATTGCC TATACAGTGAATAAA SYO3AOP1_1206 1256839 - 1258512 + | transposase SYO3AOP1_1207 1258526 - 1259158 + | transcriptional repressor, LexA family SYO3AOP1_1208 1259148 - 1259675 + | hypothetical protein SYO3AOP1_1209 1259642 - 1259908 + | hypothetical protein TERM 812 1260400 - 1260386 - g 71 -2.9 -5.16132 | GATAGGAAAAGAAAA CTTAA GATTT TTAAG ACACATCCCTACATT TERM 813 1262022 - 1262044 + G 84 -10.8 -3.08813 | TCTAAAATTGGATTA TTACCAAAAA AGC TTTTTGGTAA TGTATTAAGGTAAAA SYO3AOP1_1210 1259886 - 1262057 + | DNA polymerase B region SYO3AOP1_1211 1263079 - 1262459 - | uracil phosphoribosyltransferase SYO3AOP1_1212 1263159 - 1264079 + | histone deacetylase superfamily SYO3AOP1_1213 1264108 - 1265601 + | UDP-N-acetylmuramyl-tripeptide synthetase SYO3AOP1_1214 1265594 - 1266958 + | UDP-N-acetylmuramate/alanine ligase SYO3AOP1_1215 1266961 - 1268316 + | nicotinate phosphoribosyltransferase TERM 814 1268584 - 1268573 - g 71 -3 -5.25803 | AAGCCTTACAAAAAA TCTT AAAA AAGA AAAATTAATACAGAT TERM 815 1269001 - 1268973 - g 75 -2.6 -5.59502 | overlap 1268975 CAAAAAATCAAAAAA TATAATGTAAAA GCAAT TTTTACATCAAA GCAGTTTTTCAATCC SYO3AOP1_1216 1268313 - 1269149 + | periplasmic solute binding protein SYO3AOP1_1217 1269146 - 1269892 + | metallophosphoesterase TERM 816 1269932 - 1269965 + T 95 -10.3 -4.34402 | overlap 1269929 1269933 ATGATACTAACCTCC TCTCCTCCGGGTGGA TAAT TTCATCTGGAGGAGC TTTTAATGTAAAAAA TERM 817 1269933 - 1269964 + T 100 -13.8 -3.2032 | overlap 1269929 1269932 TGATACTAACCTCCT CTCCTCCGGGTGGA TAAT TTCATCTGGAGGAG CTTTTAATGTAAAAA SYO3AOP1_1218 1271052 - 1269952 - | metallophosphoesterase SYO3AOP1_1219 1271218 - 1271445 + | hypothetical protein SYO3AOP1_1220 1271447 - 1271650 + | hypothetical protein SYO3AOP1_1221 1271650 - 1272486 + | putative PAS/PAC sensor protein SYO3AOP1_1222 1272570 - 1273610 + | diguanylate phosphodiesterase SYO3AOP1_1223 1274470 - 1273607 - | NAD-dependent epimerase/dehydratase SYO3AOP1_1224 1274897 - 1275883 + | transposase IS116/IS110/IS902 family protein SYO3AOP1_1225 1276542 - 1276093 - | Colicin V production protein SYO3AOP1_1226 1277018 - 1276569 - | hypothetical protein SYO3AOP1_1227 1277214 - 1277020 - | ribosomal protein S21 SYO3AOP1_1228 1277334 - 1278242 + | branched-chain amino acid aminotransferase SYO3AOP1_1229 1278239 - 1278850 + | hypothetical protein TERM 818 1279019 - 1279032 + G 72 -2.5 -5.37171 | ATAATCATAAATTTT TAAAA CATC TTTTA TTTTTATTTGATGTT SYO3AOP1_1230 1278847 - 1279704 + | hypothetical protein TERM 819 1279751 - 1279738 - f 75 -2.4 -5.52347 | AATAAAATCAAAAAA CTCT ACAAAA AGAG GAATAATGTGGATAA SYO3AOP1_1231 1279759 - 1280310 + | hypothetical protein SYO3AOP1_1232 1280314 - 1280661 + | Heavy metal transport/detoxification protein SYO3AOP1_1233 1280730 - 1282598 + | heavy metal translocating P-type ATPase TERM 820 1283694 - 1283679 - g 70 -6.2 -4.1774 | AAGAATTATAAACAA TCCTAT GAAA ATAGGA GATACTATCCATATA SYO3AOP1_1234 1282675 - 1283910 + | peptidase U32 TERM 821 1284137 - 1284158 + T 74 -2.3 -5.53288 | overlap 1284139 TCCCGAGTCCGTAAG TCCGAAAAG GTCT CTTTTTTGA TTTTTTTGACTTGAA SYO3AOP1_1235 1285585 - 1284404 - | Chorismate binding-like protein TERM 822 1285017 - 1285006 - G 86 -5.8 -5.40072 | TCTTTTCTAAAAAAA GCTC CATA GAGC CGGAAATAAGAGAAA SYO3AOP1_1236 1285653 - 1286273 + | phosphoribosyl-ATP diphosphatase SYO3AOP1_1237 1286286 - 1286804 + | protein of unknown function DUF29 SYO3AOP1_1238 1286807 - 1287274 + | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen SYO3AOP1_1239 1287271 - 1288047 + | oxidoreductase FAD/NAD(P)-binding domain protein SYO3AOP1_1240 1288037 - 1288642 + | hypothetical protein SYO3AOP1_1241 1288632 - 1289117 + | 6-pyruvoyl tetrahydropterin synthase and hypothetical protein SYO3AOP1_1242 1289224 - 1289748 + | hypothetical protein TERM 823 1289847 - 1289837 - g 74 -5.4 -4.74132 | ATATTGGAGTAAAAA CAAC ACA GTTG TAGATGAAAGAGATA SYO3AOP1_1243 1289745 - 1289912 + | hypothetical protein TERM 824 1289967 - 1289955 - g 70 -6.3 -4.31943 | GTTAGATAAAAAAGA GATAG CTA CTATC GTAAATGAAACATTT SYO3AOP1_1244 1289890 - 1290186 + | histone family protein DNA-binding protein SYO3AOP1_1245 1290303 - 1291082 + | stationary-phase survival protein SurE SYO3AOP1_1246 1291082 - 1292560 + | anthranilate synthase component I SYO3AOP1_1247 1293496 - 1292828 - | polysaccharide deacetylase TERM 825 1294963 - 1294941 - g 73 -4.3 -5.09259 | opp_overlap 1294941, overlap 1294942 TATGCCAAAAGAAAA CTTTATTGA GAATT TCAATAAAA TCTATCCTAAAAAAT SYO3AOP1_1248 1293568 - 1295391 + | K potassium transporter SYO3AOP1_1249 1295404 - 1296093 + | glutamine amidotransferase class-I SYO3AOP1_1250 1296095 - 1296415 + | putative alkylmercury lyase SYO3AOP1_1251 1296408 - 1297595 + | phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase SYO3AOP1_1252 1300004 - 1297983 - | acyltransferase 3 TERM 826 1298116 - 1298138 + g 79 -3.5 -5.61689 | overlap 1298104 1298119 TTCTCAGAAATATCT GATTCTTTA TTATC TAAAGATTC TTTTTTATTGATTTT TERM 827 1298701 - 1298712 + g 70 -4.4 -4.89562 | TCAATATTTTTTATC TCCT CCAA AGGA TTTTCTTCATTTTCC TERM 828 1299152 - 1299139 - G 74 -5.3 -4.89393 | GAAAGCGGATAAAAA GACAA TAAT TTGTC AAAATATTCCGATTT SYO3AOP1_1253 1300533 - 1299997 - | acyltransferase 3 TERM 829 1301369 - 1301349 - g 74 -7.7 -3.78934 | opp_overlap 1301338, overlap 1301360 TTCCTGTTATAATAA CATCTAATA TAT CATTAGATG AAGAAGATGAGATAG SYO3AOP1_1254 1300796 - 1301524 + | DNA replication protein DnaC SYO3AOP1_1255 1301521 - 1302108 + | Imidazoleglycerol-phosphate dehydratase TERM 830 1302699 - 1302679 - g 84 -6.2 -5.13344 | ATATTAATATAAAAA GTTGTTGC TCACC ACAACAAC CCGTTAGCTTTGTGT SYO3AOP1_1256 1302111 - 1302746 + | transcriptional regulator, DeoR family TERM 831 1303087 - 1303103 + T 100 -12.3 -4.70921 | opp_overlap 1303083 1303087 AGTTTGAGGAATTTA GGCACCT TGT AGGTGCC TTTGTTTATGTTATG TERM 832 1303103 - 1303087 - T 89 -12.3 -2.56715 | opp_overlap 1303087, overlap 1303083 AGTTTGAGGAATTTA GGCACCT TGT AGGTGCC TTTGTTTATGTTATG SYO3AOP1_1257 1303518 - 1303114 - | hypothetical protein TERM 833 1303772 - 1303762 - g 74 -3.2 -5.51353 | GAAAAAGAAGAAAAA CCTA AAT CAGG AGGTAAGAAAATGAA SYO3AOP1_1258 1303666 - 1304400 + | Superoxide dismutase TERM 834 1304411 - 1304433 + T 72 -9.1 -2.69546 | opp_overlap 1304411, overlap 1304410 TTTAAAATATAAAAA GGGCGGTCT TAAAC GGACTGCCC ATTGTACCTTTCTAA TERM 835 1304433 - 1304411 - T 84 -6.2 -5.28983 | opp_overlap 1304411 1304410 TTTAAAATATAAAAA GGGCGGTC TTAAACG GACTGCCC ATTGTACCTTTCTAA SYO3AOP1_1259 1305558 - 1304419 - | queuine tRNA-ribosyltransferase TERM 836 1304980 - 1305001 + g 81 -4.5 -5.43974 | overlap 1304976 1304973 TGACCCTTGAATTAT TCCAAATAA TGCT TGATTTGGA TTTTTCTTTGCTTTT SYO3AOP1_1260 1306812 - 1305826 - | transposase IS116/IS110/IS902 family protein SYO3AOP1_1261 1308395 - 1307163 - | histidyl-tRNA synthetase SYO3AOP1_1262 1308598 - 1308395 - | thiamine biosynthesis protein ThiS SYO3AOP1_1263 1309375 - 1308608 - | enoyl-(acyl-carrier-protein) reductase (NADH) SYO3AOP1_1264 1309841 - 1309329 - | hypothetical protein SYO3AOP1_1265 1310381 - 1309842 - | Acireductone dioxygenase ARD SYO3AOP1_1266 1310914 - 1310393 - | protein of unknown function DUF29 TERM 837 1310519 - 1310533 + g 70 -7.2 -3.5771 | TAAATGGTAATTCTC TGGTTT TCT AAACCA TTTAACCAGCTTTTT SYO3AOP1_1267 1311430 - 1310918 - | protein of unknown function DUF29 SYO3AOP1_1268 1312088 - 1311441 - | methylthioribulose-1-phosphate dehydratase TERM 838 1311581 - 1311593 + g 74 -9.1 -3.02984 | opp_overlap 1311579, overlap 1311580 TTTTAATCAATACTG CCGGA ACA TCCGG ATTTATAGCTTTTCC SYO3AOP1_1269 1312547 - 1313152 + | SNARE associated Golgi protein SYO3AOP1_1270 1313149 - 1314468 + | ComEC/Rec2-related protein TERM 839 1314799 - 1314788 - g 77 -4.4 -5.31877 | opp_overlap 1314788 ATTCATTATAAAAAA TGGA TAAA TCCA ATTTTGGCTGTTGAT SYO3AOP1_1271 1314515 - 1314871 + | hypothetical protein SYO3AOP1_1272 1314939 - 1315325 + | Rhodanese domain protein TERM 840 1315337 - 1315357 + T 71 -6.8 -4.13995 | TTAATTAGATTTATG GGGGGC AAAAAAACA GCCCCC TTTGCTTTCTAAGAA SYO3AOP1_1273 1316216 - 1315569 - | DNA-(apurinic or apyrimidinic site) lyase TERM 841 1316834 - 1316847 + G 71 -5.3 -4.61747 | opp_overlap 1316834 GTAATACTTAAATTA GCAAT TTTG ATTGC TTTTATCATTGTTGG SYO3AOP1_1274 1316276 - 1317652 + | amino acid permease-associated region TERM 842 1319087 - 1319071 - g 71 -8 -3.3382 | GTGATTAGATACGAA GGTCCA AAAGG TGGACC AGGAATGAGAGAGAT SYO3AOP1_1275 1317772 - 1319445 + | dihydroxy-acid dehydratase TERM 843 1320417 - 1320399 - g 80 -5.4 -5.27779 | opp_overlap 1320399 TTGAAGATGAAAAAA TTGTAAAA AAT CTTTACAA ATTTTCTGTTAATGA SYO3AOP1_1276 1319456 - 1320571 + | Methionine adenosyltransferase SYO3AOP1_1277 1320568 - 1320999 + | hypothetical protein TERM 844 1321353 - 1321337 - T 72 -5.1 -4.91473 | opp_overlap 1321337 TAATCTAAAAAGAAA GGGAG TCTTTAG CTCCC TTTGGTGGATTAATT SYO3AOP1_1278 1322728 - 1321367 - | thiamine biosynthesis protein ThiC TERM 845 1322427 - 1322443 + g 85 -8.1 -4.59773 | opp_overlap 1322426 GTATCTGCACCATAT TTAAGAG CAA CTCTTAA TTTTTCAAGCTCCCC SYO3AOP1_1279 1323330 - 1323779 + | protein of unknown function DUF474 SYO3AOP1_1280 1323781 - 1324209 + | transcriptional regulator, BadM/Rrf2 family SYO3AOP1_1281 1324206 - 1324784 + | lipoate-protein ligase B TERM 846 1324918 - 1324908 - f 74 -5.4 -4.79756 | overlap 1324911 1324913 TATAGAATTTAAAAA GAAG ATC CTTC GGACCTACGTCCTCA SYO3AOP1_1282 1325244 - 1326056 + | oxidoreductase domain protein SYO3AOP1_1283 1326067 - 1327122 + | Glutamine--scyllo-inositol transaminase TERM 847 1327472 - 1327461 - g 81 -3 -5.77853 | AATGCTGAAAAAAAA TTCT GGAA AGAA ATGGAAAAACGCGAG SYO3AOP1_1284 1327125 - 1327511 + | hypothetical protein SYO3AOP1_1285 1327535 - 1327999 + | 6,7-dimethyl-8-ribityllumazine synthase SYO3AOP1_1286 1328004 - 1328510 + | NusB antitermination factor SYO3AOP1_1287 1328476 - 1329201 + | metallophosphoesterase SYO3AOP1_1288 1329763 - 1330062 + | hypothetical protein TERM 848 1330417 - 1330407 - g 76 -5.4 -4.9792 | overlap 1330414 GATGCTATAGAAAAA GCAA AAA TTGC TCAAAACAAAAAACC SYO3AOP1_1289 1330059 - 1330841 + | OmpA/MotB domain protein SYO3AOP1_1290 1330843 - 1331349 + | hypothetical protein TERM 849 1332113 - 1332127 + G 79 -7.2 -4.48903 | opp_overlap 1332102 1332113, overlap 1332108 TCCATTAGATGAAAA TCTAAG CAT CTTAGA TTTTAGTATGTTTTA TERM 850 1332127 - 1332113 - g 79 -7.2 -4.371 | opp_overlap 1332113 1332108, overlap 1332102 TCCATTAGATGAAAA TCTAAG CAT CTTAGA TTTTAGTATGTTTTA SYO3AOP1_1291 1331346 - 1332446 + | peptidase M50 TERM 851 1332975 - 1332999 + T 71 -8.5 -2.91796 | opp_overlap 1332976, overlap 1332970 1332968 1332966 TTTTTATGGAAGAAA AGCCCTTCCCA CTT TGAGAAGGGCC TATCATATCATTTTG TERM 852 1332998 - 1332976 - T 100 -14.2 -4.67982 | opp_overlap 1332975 1332970 1332968 1332966 TTTTATGGAAGAAAA GCCCTTCCCA CTT TGAGAAGGGC CTATCATATCATTTT SYO3AOP1_1293 1333489 - 1333007 - | cytochrome c' SYO3AOP1_1294 1333770 - 1334207 + | hypothetical protein TERM 853 1334220 - 1334243 + T 85 -8.9 -4.11664 | opp_overlap 1334223, overlap 1334223 TAAAAATCTTAGTTA GAAGGGGGA TCTTCT TCCTCCTTC TTTAATTCTTCTAAA SYO3AOP1_1295 1334431 - 1334213 - | hypothetical protein SYO3AOP1_1296 1334545 - 1335624 + | Mrp protein TERM 854 1336813 - 1336800 - g 70 -8.1 -3.06501 | GATATCTCCATTTAA CCCAG AAAA CTGGG AAGAGTTTACAAAAA SYO3AOP1_1297 1335637 - 1336848 + | aminotransferase class V SYO3AOP1_1298 1337174 - 1337635 + | nitrogen-fixing NifU domain protein TERM 855 1337670 - 1337695 + GF 86 -11.3 -2.70932 | GCTATATTCCGGTGG GCTTGATAGTA CTCT TGCTATCAAGC TCGTTCAAAACCAAG SYO3AOP1_1299 1337635 - 1338702 + | thiamine biosynthesis protein SYO3AOP1_1300 1338674 - 1338907 + | SirA family protein SYO3AOP1_1301 1338907 - 1339128 + | hypothetical protein SYO3AOP1_1302 1339140 - 1339394 + | nitrogen-fixing NifU domain protein SYO3AOP1_1303 1339391 - 1340230 + | shikimate 5-dehydrogenase SYO3AOP1_1304 1340236 - 1340649 + | protein of unknown function UPF0047 TERM 856 1340790 - 1340809 + F 75 -8 -3.63515 | opp_overlap 1340803 ACTTTCTCTTCTTGT TTTCTTCT AAAA AGAAGAAA TTCTTCGGAATAAAG TERM 857 1340815 - 1340803 - f 76 -6.3 -4.56597 | opp_overlap 1340790 GTTTTCTTCTAAAAA GAAGA AAT TCTTC GGAATAAAGACCTTA TERM 858 1341114 - 1341128 + F 100 -7.2 -5.33921 | opp_overlap 1341114 TCAGCATTTTAATAA TCAAAC ACT GTTTGA TTTTTTAATTCATTT TERM 859 1341128 - 1341114 - f 70 -7.2 -3.66018 | opp_overlap 1341114 TCAGCATTTTAATAA TCAAAC ACT GTTTGA TTTTTTAATTCATTT TERM 860 1342253 - 1342237 - g 72 -5.1 -4.92757 | overlap 1342238 GGATTAACAAGAAAA GCAAGAG AAG CTCTTGG AATGCCAGAAGAAAA TERM 861 1342252 - 1342238 - g 76 -8.6 -3.5457 | overlap 1342237 GATTAACAAGAAAAG CAAGAG AAG CTCTTG GAATGCCAGAAGAAA SYO3AOP1_1305 1341196 - 1343766 + | aconitate hydratase 2 TERM 862 1343802 - 1343778 - f 84 -9.9 -3.46007 | opp_overlap 1343779, overlap 1343779 ATAAAAGTTAACTAA CGCCGTGGGCT TGT AGCCTACGGCT TTTTTTATTTTAAAA TERM 863 1343801 - 1343779 - f 100 -13.4 -2.6652 | opp_overlap 1343779, overlap 1343778 TAAAAGTTAACTAAC GCCGTGGGCT TGT AGCCTACGGC TTTTTTTATTTTAAA TERM 864 1343779 - 1343801 + F 100 -15.6 -6.09196 | opp_overlap 1343779 1343778 TAAAAGTTAACTAAC GCCGTGGGCT TGT AGCCTACGGC TTTTTTTATTTTAAA SYO3AOP1_1306 1344197 - 1344709 + | Redoxin domain protein TERM 865 1344725 - 1344748 + F 100 -13.2 -3.1996 | opp_overlap 1344720 TTAAAAAATATTTTT CTCCCGGGAT TAAA ATCTCGGGAG TTCAATTAAAATTTA TERM 866 1344836 - 1344858 + F 80 -6.2 -4.93333 | TACCTTTCCGTGTCA TCCTGAGGCT GTA AGCCGAAGGA TTTTCTCTTTTGATT TERM 867 1345329 - 1345317 - f 74 -7.7 -3.76815 | AGTCAAAATTTTAAA GCACT CTC AGTGC AAAAATTTTCATCAA TERM 868 1345952 - 1345964 + G 79 -4.9 -5.1675 | TGTATTACCTTACAG GAAAA CCG TTTTC TTTTTTCATAAATCA SYO3AOP1_1307 1345462 - 1346385 + | tRNA delta(2)-isopentenylpyrophosphate transferase SYO3AOP1_1308 1346369 - 1346557 + | RNA chaperone Hfq SYO3AOP1_1309 1346560 - 1347678 + | GTP-binding protein HflX SYO3AOP1_1310 1347647 - 1347991 + | histidine triad (HIT) protein SYO3AOP1_1311 1347969 - 1348571 + | SirA family protein SYO3AOP1_1312 1348590 - 1349414 + | Silent information regulator protein Sir2 SYO3AOP1_1313 1349916 - 1351325 + | D-lactate dehydrogenase (cytochrome) TERM 869 1351338 - 1351381 + T 77 -7.6 -4.14392 | gap 1 TAAATACATTTTAAA GATTCTTCT-CTGGCTGGC TAAAAAC GCTGGTCAGTAGAAGAGTC TTTTAAAAATTAACA SYO3AOP1_1314 1352339 - 1351713 - | Radical SAM domain protein SYO3AOP1_1315 1354324 - 1352327 - | anaerobic ribonucleoside-triphosphate reductase TERM 870 1352621 - 1352636 + g 72 -4.8 -4.76644 | opp_overlap 1352635, overlap 1352635 TATATAAATTATTGT TCTTTT ACTG AAAAGA TTTTTGATAAATCTT SYO3AOP1_1316 1355554 - 1354415 - | hypothetical protein TERM 871 1354482 - 1354457 - G 84 -6.3 -5.27938 | ATTCTTAAATAAAAA TAAGCTACTTA AAAC TAAATAGCCTA TGATTAAAACAGAAA SYO3AOP1_1317 1355892 - 1355554 - | Cupin 2 conserved barrel domain protein SYO3AOP1_1318 1356367 - 1355903 - | Hemerythrin HHE cation binding domain protein TERM 872 1356014 - 1355997 - G 80 -5.7 -5.04249 | TCTGGAAAAAAGAAA TTTTCTT CCTC AAGAAAA TGGTCGTAAATCATT TERM 873 1356557 - 1356584 + r 77 -7.8 -3.97446 | overlap 1356562 CTTAACGTACGATGT GTAAGGGCAATT CATG AATTGCCTCTAC TTTCACTTTCTTTGT TERM 874 1356562 - 1356579 + r 72 -8.5 -3.04853 | overlap 1356557 CGTACGATGTGTAAG GGCAATT CATG AATTGCC TCTACTTTCACTTTC SYO3AOP1_1319 1357026 - 1356730 - | protein of unknown function DUF59 SYO3AOP1_1320 1358300 - 1357029 - | dihydroorotase, multifunctional complex type TERM 875 1358542 - 1358559 + H 71 -8.5 -2.83409 | CTTATTCAATGTATG GGCAATT CATG AATTGCC TCTGCTCACTTACTC SYO3AOP1_1321 1358771 - 1359529 + | undecaprenol kinase SYO3AOP1_1322 1359538 - 1360320 + | Indole-3-glycerol-phosphate synthase SYO3AOP1_1323 1360326 - 1362074 + | PHP domain protein TERM 876 1362069 - 1362081 + F 76 -3.4 -5.40072 | AAGTTTGGTGTTAAG GCAT GAAAA ATGC TTTTTTTGGAGAAAA SYO3AOP1_1324 1362071 - 1362463 + | hypothetical protein SYO3AOP1_1325 1362788 - 1364224 + | glutamyl-tRNA synthetase SYO3AOP1_1326 1364221 - 1364568 + | hypothetical protein TERM 877 1365076 - 1365053 - T 77 -9 -3.19091 | opp_overlap 1365057, overlap 1365054 1365057 1365061 AGAGTTAGTTATGAA CCAAGAAAGA AATT TCTTTCTTGA AAATGACGATGATAA TERM 878 1365075 - 1365054 - T 79 -10.3 -2.51133 | opp_overlap 1365057, overlap 1365053 1365057 1365061 GAGTTAGTTATGAAC CAAGAAAGA AATT TCTTTCTTG AAAATGACGATGATA SYO3AOP1_1329 1368852 - 1367152 - | Peptidoglycan glycosyltransferase TERM 879 1368005 - 1367985 - G 75 -4.7 -5.06414 | overlap 1368002 CTTCTGCAAGAAAAA TAGGCTTTG CTA CAGAACCTA CCTCGTAAGCATGCT SYO3AOP1_1330 1369172 - 1368852 - | Septum formation initiator SYO3AOP1_1331 1370054 - 1369173 - | S-adenosyl-methyltransferase MraW SYO3AOP1_1332 1370819 - 1370055 - | beta-lactamase domain protein SYO3AOP1_1333 1371223 - 1370864 - | Roadblock/LC7 family protein SYO3AOP1_1334 1374841 - 1371908 - | valyl-tRNA synthetase TERM 880 1371940 - 1371950 + g 70 -4 -5.08086 | opp_overlap 1371940 CAAGCATTTTTATAA GATT TAA AATC TTTTCTCTTTTTTCT TERM 881 1374853 - 1374870 + r 74 -8.5 -3.18024 | overlap 1374852 GCATATTTTACCTCT TGTTTGC TCTT GCAAACA CTTTTAATGGTAAAG SYO3AOP1_1335 1376044 - 1374845 - | Argininosuccinate synthase SYO3AOP1_1336 1377647 - 1376427 - | putative sigma54 specific transcriptional regulator TERM 882 1377285 - 1377295 + g 81 -4 -5.66989 | overlap 1377269 AGCTACCAAAGAAGC TCTT TCT AAGA TTTTTTTCATCTTTA SYO3AOP1_1337 1378501 - 1377644 - | TPR repeat-containing protein SYO3AOP1_1338 1379086 - 1378502 - | phosphoheptose isomerase SYO3AOP1_1339 1380247 - 1379261 - | transposase IS116/IS110/IS902 family protein SYO3AOP1_1340 1380726 - 1381250 + | hypothetical protein SYO3AOP1_1341 1381240 - 1381620 + | hypothetical protein SYO3AOP1_1342 1381632 - 1381952 + | hypothetical protein SYO3AOP1_1343 1381968 - 1382126 + | hypothetical protein TERM 883 1382416 - 1382431 + G 73 -7.6 -3.59252 | opp_overlap 1382418, overlap 1382414 1382411 TTGAAAACGGGGATA GAGAGT TAAT ACTCTC TCTTCTTTCATCAAA TERM 884 1382807 - 1382789 - g 70 -6.1 -4.26188 | opp_overlap 1382782 TGTAGAGATTGAAAA GCTTTTA AATTA TAAAAGC GATAAAGCATTTGTA SYO3AOP1_1344 1382187 - 1384295 + | heavy metal translocating P-type ATPase SYO3AOP1_1345 1384314 - 1384607 + | conserved hypothetical lipoprotein SYO3AOP1_1346 1384830 - 1385090 + | hypothetical protein SYO3AOP1_1347 1385087 - 1385422 + | hypothetical protein SYO3AOP1_1348 1385856 - 1385419 - | protein of unknown function DUF458 TERM 885 1385659 - 1385669 + g 75 -2.6 -5.63012 | overlap 1385653 CATCAGCCTTTCTCT TAAA GAA TTTA TTTTTCTTTCTTTTT SYO3AOP1_1349 1386061 - 1385921 - | hypothetical protein SYO3AOP1_1350 1387117 - 1386353 - | protein of unknown function DUF62 SYO3AOP1_1351 1387758 - 1387114 - | cytidylate kinase SYO3AOP1_1352 1388526 - 1387771 - | HAD-superfamily hydrolase, subfamily IA, variant 1 TERM 886 1389352 - 1389338 - g 72 -5.8 -4.54047 | GCATGGCATACAAAA TATATG ATA CATATA AAAAATATCCTGATT SYO3AOP1_1353 1388731 - 1389465 + | protein of unknown function DUF399 TERM 887 1389491 - 1389471 - f 85 -6.7 -5.1101 | overlap 1389472 GTATGATTGAAAAAA CCCCCGTCG GTC CGGCAGGGA GTGAGATGGTTATTT TERM 888 1389490 - 1389472 - f 75 -8 -3.65883 | overlap 1389471 TATGATTGAAAAAAC CCCCGTCG GTC CGGCAGGG AGTGAGATGGTTATT TERM 889 1390099 - 1390089 - g 71 -3.2 -5.23016 | AAACAATCCAAAAAA CAGA TAT TCCG TTTATAGTTTATGTG SYO3AOP1_1354 1389866 - 1391155 + | protein of unknown function DUF107 SYO3AOP1_1355 1392017 - 1391349 - | exsB protein SYO3AOP1_1356 1393128 - 1392019 - | peptide chain release factor 2 TERM 890 1392168 - 1392186 + g 71 -3 -5.27923 | CATAAGACCTTATCT GACTTCCC CAT GTGATGTC TTTTTTCTCGCCTTC SYO3AOP1_1357 1394462 - 1393185 - | restriction modification system DNA specificity domain TERM 891 1393866 - 1393856 - G 71 -5.4 -4.70659 | CTCCATATGTAAAAA GATG CTT CATC ATAGACTTTTTAAGC SYO3AOP1_1358 1395343 - 1394471 - | Prephenate dehydrogenase SYO3AOP1_1359 1396200 - 1395355 - | UspA domain protein SYO3AOP1_1360 1397393 - 1396203 - | cation diffusion facilitator family transporter TERM 892 1396728 - 1396740 + g 72 -3.5 -5.17786 | AACTACTGCCGGATT TTTAA GAA TTAAA TTTTTGATTTTATTA SYO3AOP1_1361 1398542 - 1397412 - | carbamoyl-phosphate synthase, small subunit TERM 893 1397816 - 1397828 + g 80 -10.5 -2.67803 | opp_overlap 1397813, overlap 1397813 GATAGGTTAAAATCG CCGGG TCT CCCGG TCCATTTGATAAGAA SYO3AOP1_1363 1400777 - 1399539 - | transposase mutator type TERM 894 1401372 - 1401404 + r 77 -4.2 -5.40072 | gap 1, opp_overlap 1401375 1401377, overlap 1401377 TTGACATTTAACATA GAACATCCTGAGGAC CTTA GTCCGAAGGAT-TTC TTTTTTTAAAAACCG TERM 895 1401377 - 1401400 + r 80 -5.2 -5.20328 | opp_overlap 1401377 1401375, overlap 1401372 ATTTAACATAGAACA TCCTGAGGAC CTTA GTCCGAAGGA TTTCTTTTTTTAAAA SYO3AOP1_1364 1401742 - 1401551 - | hypothetical protein SYO3AOP1_1365 1402407 - 1401805 - | recombination protein RecR SYO3AOP1_1366 1402736 - 1402404 - | hypothetical protein SYO3AOP1_1367 1404234 - 1402729 - | DNA polymerase III, subunits gamma and tau TERM 896 1404231 - 1404221 - G 71 -5.4 -4.57073 | TATTTTCTTGAAAAA GCTT CGT AAGC CAATATTTACCTCGA SYO3AOP1_1368 1405302 - 1404469 - | TonB family protein SYO3AOP1_1369 1405705 - 1405304 - | Biopolymer transport protein ExbD/TolR TERM 897 1405543 - 1405554 + g 78 -5.8 -4.81249 | TTTGTGTAGATTTTG CAGG TTCT CCTG TTTTTGCCTTTGGAA SYO3AOP1_1370 1406158 - 1405715 - | MotA/TolQ/ExbB proton channel SYO3AOP1_1371 1407622 - 1406198 - | polyferredoxin-like protein TERM 898 1407369 - 1407385 + g 75 -9.5 -2.83715 | opp_overlap 1407368 1407369 ATGGTGCAAAAGAAT CTTCCAA CGG TTGGAAG TGTGATAATCATGAA TERM 899 1407385 - 1407369 - G 76 -9.5 -3.10175 | opp_overlap 1407369, overlap 1407368 ATGGTGCAAAAGAAT CTTCCAA CGG TTGGAAG TGTGATAATCATGAA SYO3AOP1_1372 1409751 - 1407646 - | TonB-dependent receptor plug TERM 900 1407696 - 1407677 - G 74 -6.4 -4.41422 | overlap 1407674 CCATAGACAAAATAA GTTCTTGG GGCA CCAGGAAC ATATGGAGTAGATGA TERM 901 1409956 - 1409929 - R 73 -7.8 -3.61646 | overlap 1409934 AAGGTGAGAAAGTAA GTAGAGGCAATT CATG AATTGCCCGTAC AGTGATAAGTGAGAG TERM 902 1409951 - 1409934 - R 72 -8.5 -3.00667 | overlap 1409929 GAGAAAGTAAGTAGA GGCAATT CATG AATTGCC CGTACAGTGATAAGT SYO3AOP1_1373 1410637 - 1410230 - | ferric uptake regulator, Fur family TERM 903 1410958 - 1410972 + H 70 -7.2 -3.66654 | opp_overlap 1410953 1410958 TACCAAACGATAAAA TGCAAA TGA TTTGCA TTTGAAATTAGAATC TERM 904 1410972 - 1410958 - H 80 -7.2 -4.63172 | opp_overlap 1410958, overlap 1410953 TACCAAACGATAAAA TGCAAA TGA TTTGCA TTTGAAATTAGAATC SYO3AOP1_1374 1411039 - 1413327 + | 5-methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase TERM 905 1413337 - 1413363 + F 100 -9.4 -4.84642 | overlap 1413338 CAGTAAACATCTACT TCCGGGACTCAG TTT TTGGGTCTCGGG TTTTATTAGTTTAAG TERM 906 1413338 - 1413362 + F 85 -10.7 -3.497 | overlap 1413337 AGTAAACATCTACTT CCGGGACTCAG TTT TTGGGTCTCGG GTTTTATTAGTTTAA TERM 907 1414353 - 1414337 - g 75 -9.5 -2.88961 | overlap 1414339 1414348 TAAAATAGTAGCAGA TATGGCT ATA AGCCATA CAATGACAGAAGGAT SYO3AOP1_1375 1413408 - 1414643 + | N-acetylmuramoyl-L-alanine amidase SYO3AOP1_1376 1414640 - 1415398 + | putative transcriptional acitvator, Baf family TERM 908 1415419 - 1415402 - T 100 -11.3 -4.96106 | GATAAATATTAAAAA GTGGGCT TTTG AGCCCAC CATAAAGGTTATTGT SYO3AOP1_1377 1415634 - 1415428 - | hypothetical protein TERM 909 1415481 - 1415492 + g 71 -3 -5.17576 | overlap 1415485 1415486 CTTCGCATTCGTATT TTTC TCCA GAAA TTTTTTGAATTACTG TERM 910 1415697 - 1415714 + r 77 -4.3 -5.16133 | opp_overlap 1415697, overlap 1415708 GATAAATTTCAACAA TATATTA TATT TAATATA TTTTTATATTATAAT SYO3AOP1_1378 1417464 - 1415902 - | drug resistance transporter, EmrB/QacA subfamily TERM 911 1416337 - 1416322 - G 70 -4 -5.01732 | AACCGGTGCAAAAAA CATTCC CATA GAAATG CCAAGAGGAATGGTC SYO3AOP1_1379 1418588 - 1417464 - | secretion protein HlyD family protein TERM 912 1417868 - 1417880 + g 72 -4.9 -4.82111 | CTGTGTATTTTATTT GATTT TCT AAATC TTCTTTTTGTTTTGT TERM 913 1418104 - 1418118 + g 76 -7.2 -4.25527 | opp_overlap 1418103 GCCTTTGGGACAAGC CCTTTT TCT AAAAGG TTTCTATATCTTTCT SYO3AOP1_1380 1419862 - 1418585 - | outer membrane efflux protein TERM 914 1419608 - 1419596 - G 72 -3.4 -5.15969 | opp_overlap 1419596 GTCGAATGTAAAAAA GTCT TTGTT AGAC TGTTTAAAGGAGATT SYO3AOP1_1381 1420429 - 1419875 - | transcriptional regulator, TetR family TERM 915 1420021 - 1420033 + g 89 -7.7 -5.07941 | opp_overlap 1420016, overlap 1420018 CGACAAAAGAGTCCT GACCT GGC AGGTC TTTTTCTATGATTTT SYO3AOP1_1382 1421592 - 1420426 - | iron-containing alcohol dehydrogenase SYO3AOP1_1383 1424826 - 1421782 - | acriflavin resistance protein TERM 916 1424666 - 1424676 + g 71 -6.8 -4.00468 | opp_overlap 1424666 GTATCAACTACATAA GGAG AAG CTCC TTTATACGTTGTAGT TERM 917 1424887 - 1424870 - H 74 -8.5 -3.34902 | overlap 1424868 TTTCATTATATAATA TGACTGA TAAA TCAGTCA AGGAATTAGTAAAGC SYO3AOP1_1384 1425227 - 1426213 + | transposase IS116/IS110/IS902 family protein TERM 918 1426262 - 1426221 - T 70 -8.1 -3.12999 | opp_overlap 1426221 1426228 1426230, overlap 1426228 1426230 GCACTTGACATTTAA CATAAAACATCCTGAGGAC TTTA GTCCGAAGGATCTCTTATG TATCGTATTTGTGCT SYO3AOP1_1385 1426854 - 1426297 - | hypothetical protein SYO3AOP1_1386 1428284 - 1426851 - | glycogen/starch synthase, ADP-glucose type TERM 919 1428186 - 1428196 + g 74 -5.4 -4.87665 | AAATACTTTAACACC TTGC GAG GCAA TTTTTCTCGGTAAAG SYO3AOP1_1387 1429316 - 1428285 - | galactose-1-phosphate uridylyltransferase SYO3AOP1_1388 1429822 - 1430709 + | glucose-1-phosphate thymidylyltransferase TERM 920 1430835 - 1430815 - g 79 -4.7 -5.27923 | opp_overlap 1430797 1430815 GAATTTTATAAAAAA TCTGACTTT GAA AAAGCCGGA TTAAATGTTGAATTT SYO3AOP1_1389 1430713 - 1431279 + | dTDP-4-dehydrorhamnose 3,5-epimerase TERM 921 1431508 - 1431485 - g 76 -5.3 -5.09762 | CTTTAATAAAGAAAA GCCCAATAT TGTAGT ACACTGGGC AGCAGAAAGTCATGT SYO3AOP1_1390 1431276 - 1432244 + | dTDP-glucose 4,6-dehydratase SYO3AOP1_1391 1433440 - 1432229 - | transposase, IS605 OrfB family TERM 922 1432989 - 1433005 + g 77 -4.5 -5.13343 | overlap 1432991 TTACCGCTTTTTGTT TTTGTAA TGG TTACAGA TTTTATTTTCCCTTC TERM 923 1433318 - 1433328 + g 74 -4 -5.24129 | TGGTTGTTTATTTTT TAGA GCT TCTA TTTTTTCTGCCAACA SYO3AOP1_1392 1433840 - 1433424 - | transposase IS200-family protein SYO3AOP1_1393 1434997 - 1433873 - | Integrase catalytic region TERM 924 1434614 - 1434624 + g 75 -2.6 -5.63517 | opp_overlap 1434614 GCAGAGTTTATCAAG TAAA ACC TTTA TTTTTTCTTTCCCAA SYO3AOP1_1394 1436416 - 1435244 - | hypothetical protein TERM 925 1435865 - 1435877 + g 70 -6.3 -4.1891 | opp_overlap 1435865 ATACGCAAATATTAA TCCAA TCA TTGGA TTTCTCTTGCCAGAA TERM 926 1437151 - 1437164 + G 71 -5.3 -4.69512 | CTATCTTCTAAGTTT TTGGT GGAT ACCAA TTATTTTTCTATTTT TERM 927 1437584 - 1437570 - g 74 -5.8 -4.58283 | opp_overlap 1437570 CAATTCTTGGAAAAA TTTCTA ATA TAGAAA TTCTTAATGAAATAG SYO3AOP1_1395 1436996 - 1438408 + | exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase SYO3AOP1_1396 1439646 - 1438426 - | glycosyl transferase group 1 TERM 928 1438604 - 1438614 + g 76 -5.4 -5.07107 | overlap 1438611 GGTTCAAAATATCCT TCTC CTT GAGA TTTTTTAAAGATTTC SYO3AOP1_1397 1440762 - 1439656 - | glycosyl transferase group 1 TERM 929 1439934 - 1439918 - G 78 -6.6 -4.3586 | GGAGTTAGAGCAAAA CCTTCA AAGAG TGAAGG GCAAACATACGCATA SYO3AOP1_1398 1441884 - 1440904 - | protein containing nucleotide-diphospho-sugar transferase domain TERM 930 1441261 - 1441249 - G 77 -7.7 -4.00526 | opp_overlap 1441256 AAGTTGATAAGTAAA TTGGG TAT CCCAA GTAAGGTTGGGATTT SYO3AOP1_1399 1443019 - 1441886 - | glycosyl transferase group 1 TERM 931 1442967 - 1442955 - G 71 -7.7 -3.54459 | opp_overlap 1442954 1442955 CTAATTCCTTCTAAA TAGCC TAA GGCTA CTGTCTTTGGTCCAC SYO3AOP1_1400 1443261 - 1443022 - | hypothetical protein TERM 932 1443509 - 1443529 + r 72 -3.3 -5.14477 | opp_overlap 1443512 GAATTTTTCGGGTAT TAACTAATC TAA GTTTAGTTG TTTTTTGAATGTATA SYO3AOP1_1402 1445072 - 1443954 - | glycosyl transferase family 2 TERM 933 1444836 - 1444854 + g 90 -9 -4.63479 | opp_overlap 1444836 1444839 GTAATTTACATCCAA GAATAATG GAC CATTATTC TTTTCATTTCTAATA TERM 934 1444854 - 1444836 - G 74 -9 -3.14522 | opp_overlap 1444836, overlap 1444839 GTAATTTACATCCAA GAATAATG GAC CATTATTC TTTTCATTTCTAATA SYO3AOP1_1404 1446333 - 1445491 - | glycosyl transferase family 2 SYO3AOP1_1405 1447596 - 1446340 - | polysaccharide biosynthesis protein SYO3AOP1_1406 1448748 - 1447618 - | NAD-dependent epimerase/dehydratase SYO3AOP1_1407 1449933 - 1448779 - | GDP-mannose 4,6-dehydratase TERM 935 1450778 - 1450767 - R 74 -5.8 -4.62471 | opp_overlap 1450753 1450766 1450767 TGCAATTTTTAAAAA CTGC TTTG GCAG GTTTTTTCTGGATAA SYO3AOP1_1409 1452921 - 1450834 - | acyltransferase 3 TERM 936 1452395 - 1452365 - G 72 -8.6 -3.10925 | opp_overlap 1452364, overlap 1452361 1452357 1452364 AAAATGATAAAGAAG TTTATAGATATAAA CTT TTTAAATCTATAAA GTAAATAAATAAGAA SYO3AOP1_1412 1454648 - 1453887 - | Integrase catalytic region SYO3AOP1_1413 1454944 - 1454696 - | transposase IS3/IS911 family protein TERM 937 1455291 - 1455302 + H 77 -4.4 -5.186 | ATACACATTTTAACT CCTT TTGG AAGG TTTTTATCTGTTTTG SYO3AOP1_1414 1455455 - 1455733 + | hypothetical protein TERM 938 1455771 - 1455745 - f 83 -9.4 -3.94 | opp_overlap 1455748, overlap 1455748 1455750 GTAATGCTTAAAGAA TGAGAGCTCTCC ATG GGAGAGCTCTTG CTAAAAAGGAGTGTG TERM 939 1455768 - 1455748 - f 100 -15.5 -3.02639 | opp_overlap 1455748, overlap 1455745 1455750 ATGCTTAAAGAATGA GAGCTCTCC ATG GGAGAGCTC TTGCTAAAAAGGAGT TERM 940 1455748 - 1455768 + F 100 -15.5 -3.14211 | opp_overlap 1455745 1455748 1455750 ATGCTTAAAGAATGA GAGCTCTCC ATG GGAGAGCTC TTGCTAAAAAGGAGT TERM 941 1455766 - 1455750 - f 90 -12.3 -3.06509 | opp_overlap 1455748, overlap 1455748 1455745 GCTTAAAGAATGAGA GCTCTCC ATG GGAGAGC TCTTGCTAAAAAGGA TERM 942 1456379 - 1456368 - g 81 -3 -5.72254 | opp_overlap 1456368, overlap 1456371 TTAAAGAAGAAAAAA GATT TATA AATC CTCTTATAATGAAAT SYO3AOP1_1415 1455791 - 1456927 + | Kunitz/bovine pancreatic trypsin inhibitor domain protein SYO3AOP1_1416 1456924 - 1457412 + | hypothetical protein TERM 943 1458499 - 1458479 - g 78 -9.7 -3.21806 | opp_overlap 1458481 1458485, overlap 1458484 1458485 TGAATGAAGAGGGAA CAGAAGCTG CAG CAGCTACTG CTGTAGTATTAGACA TERM 944 1458485 - 1458505 + G 89 -11.9 -3.01712 | opp_overlap 1458484 1458479 1458485, overlap 1458481 AAGAGGGAACAGAAG CTGCAGCAG CTA CTGCTGTAG TATTAGACACAAAAG TERM 945 1458505 - 1458485 - g 75 -9.7 -2.82187 | opp_overlap 1458481 1458485, overlap 1458484 1458479 AAGAGGGAACAGAAG CTGCAGCAG CTA CTGCTGTAG TATTAGACACAAAAG SYO3AOP1_1417 1457431 - 1458636 + | proteinase inhibitor I4 serpin SYO3AOP1_1418 1458674 - 1458901 + | hypothetical protein SYO3AOP1_1419 1459048 - 1459467 + | hypothetical protein SYO3AOP1_1420 1459497 - 1459811 + | hypothetical protein SYO3AOP1_1421 1459814 - 1461490 + | hypothetical protein SYO3AOP1_1422 1462691 - 1461453 - | transposase mutator type SYO3AOP1_1423 1462845 - 1463012 + | hypothetical protein SYO3AOP1_1424 1463033 - 1464190 + | hypothetical protein SYO3AOP1_1425 1464266 - 1466062 + | hypothetical protein SYO3AOP1_1426 1466073 - 1467158 + | hypothetical protein SYO3AOP1_1427 1467194 - 1468318 + | hypothetical protein SYO3AOP1_1428 1468311 - 1469552 + | hypothetical protein SYO3AOP1_1429 1469589 - 1471595 + | PDZ/DHR/GLGF domain protein SYO3AOP1_1430 1471597 - 1472664 + | hypothetical protein SYO3AOP1_1431 1473810 - 1473355 - | ATP-cone domain protein SYO3AOP1_1432 1475093 - 1473807 - | glutamate-1-semialdehyde-2,1-aminomutase TERM 946 1474577 - 1474594 + g 77 -9.1 -3.27923 | overlap 1474582 1474588 TTAAACTTGCTAATT CTTCCGG TATT CCGGGAG TTCCTGGTATTCCAA TERM 947 1475297 - 1475264 - R 72 -3.7 -5.28315 | overlap 1475267 1475269 ATAAAATTTAAAAAA TGAGATCCTTCGGGC TAAA GCCCTCAGGATGACA AAAACAATACAATAA TERM 948 1475374 - 1475391 + r 71 -8.5 -2.93109 | overlap 1475369 CTTACTCATTGTATT GGCAATT CATG AATTGCC TCTACTCATTTTCTC SYO3AOP1_1433 1477613 - 1475499 - | DNA ligase, NAD-dependent SYO3AOP1_1434 1478272 - 1477583 - | deoxyribose-phosphate aldolase SYO3AOP1_1435 1479077 - 1478247 - | ribosomal L11 methyltransferase SYO3AOP1_1436 1479496 - 1479074 - | transcriptional regulator, MerR family TERM 949 1479430 - 1479446 + g 77 -8.1 -3.8505 | ATCTTAGTGTTTGCG GATGTAT ATT ATACATC TTTGCTACTGTTCCT SYO3AOP1_1437 1480658 - 1479519 - | chaperone protein DnaJ TERM 950 1479656 - 1479638 - G 83 -8.2 -4.19953 | opp_overlap 1479638, overlap 1479626 CATTGAACTGTAAAA TCAGGTCA CCA TAACCTGA TTGTTTAAGCCTTGG SYO3AOP1_1438 1481017 - 1481634 + | DNA polymerase III, epsilon subunit TERM 951 1481954 - 1481941 - g 75 -2.4 -5.65678 | AGAAAAGATAAAAAA GCTT GCTGAA AAGC CCTTGATAGTTAGAA SYO3AOP1_1439 1481627 - 1482415 + | pyrroline-5-carboxylate reductase SYO3AOP1_1440 1485657 - 1482412 - | RAP domain protein TERM 952 1482645 - 1482655 + g 75 -2.6 -5.53436 | opp_overlap 1482645 CAACTTCTAATGCAA TAAA CTT TTTA TTTTTTCTGTTGTAT TERM 953 1483515 - 1483505 - G 77 -4 -5.42514 | TCAGAAACTAAAAAA TCTA AAA TAGA AGATTTCGTTAATGT TERM 954 1484233 - 1484245 + g 72 -4.9 -4.86033 | TCCATATTTTTCTAA TACTT TAA AAGTA TTTTTATGAAGATTT SYO3AOP1_1441 1486178 - 1485654 - | hypothetical protein SYO3AOP1_1442 1487329 - 1486223 - | oxygen-independent coproporphyrinogen III oxidase TERM 955 1487228 - 1487192 - G 74 -9 -3.12803 | gap 1, opp_overlap 1487189 1487203, overlap 1487203 AAAATCATTATCTAA GTACATCAAAAGCTCTT TTTT AAGAGCTTCT-ACGTAC CTATCTTTCAATTTA TERM 956 1487218 - 1487203 - G 82 -7.6 -4.39287 | opp_overlap 1487189 1487203, overlap 1487192 CTAAGTACATCAAAA GCTCTT TTTT AAGAGC TTCTACGTACCTATC SYO3AOP1_1443 1489737 - 1487326 - | DEAD/DEAH box helicase domain protein SYO3AOP1_1444 1490049 - 1490402 + | hypothetical protein SYO3AOP1_1445 1491768 - 1490710 - | binding-protein-dependent transport systems inner membrane component SYO3AOP1_1446 1492754 - 1491768 - | binding-protein-dependent transport systems inner membrane component TERM 957 1492721 - 1492696 - G 88 -6.2 -5.43621 | opp_overlap 1492697, overlap 1492697 AGAAAGGATAAAAAA GTGATTCCCA GCAAAA TGGGAATCAT TTGATAAAGTCTTTT TERM 958 1492720 - 1492697 - G 83 -9.7 -3.83732 | opp_overlap 1492697, overlap 1492696 GAAAGGATAAAAAAG TGATTCCCA GCAAAA TGGGAATCA TTTGATAAAGTCTTT TERM 959 1492697 - 1492720 + g 83 -9.7 -3.76781 | opp_overlap 1492697 1492696 GAAAGGATAAAAAAG TGATTCCCA GCAAAA TGGGAATCA TTTGATAAAGTCTTT SYO3AOP1_1447 1493950 - 1492754 - | aminotransferase class I and II TERM 960 1493316 - 1493332 + g 88 -3.7 -5.93252 | overlap 1493319 TCTCCATATGCAAGG TCATGGA CAA TCCATAA TTTTTTCTTTTTAGC SYO3AOP1_1448 1495492 - 1493963 - | Peptidase M23 TERM 961 1494609 - 1494621 + g 84 -3.5 -5.89659 | TCTCCTCTTTTTACT TTATA AAC TATAA TTTTTGTTTTTTTCT SYO3AOP1_1449 1495739 - 1495470 - | acylphosphatase SYO3AOP1_1450 1496236 - 1495739 - | molybdopterin-guanine dinucleotide biosynthesis protein B SYO3AOP1_1451 1497071 - 1496229 - | acetyl-CoA carboxylase, carboxyl transferase, beta subunit SYO3AOP1_1452 1497706 - 1497074 - | protein of unknown function DUF152 TERM 962 1497815 - 1497794 - H 71 -8.7 -2.81487 | overlap 1497793 1497791 AATTAAAAAAGAGAT CCTTAGGAC TTAC GTCCTCAGG GTGAAAAATAAAGTG TERM 963 1497967 - 1497954 - H 74 -3.9 -5.24129 | TTCTTCTATAAAAAA TTGAT AGAT ATCAA TGAAATATAAAAAAT SYO3AOP1_1453 1498067 - 1498573 + | ubiquinol-cytochrome c reductase, iron-sulfur subunit SYO3AOP1_1454 1498594 - 1499778 + | Cytochrome b/b6 domain protein TERM 964 1500312 - 1500295 - g 72 -2.7 -5.36314 | overlap 1500287 TAAAATATCAAAAAA TTGAAGC AGAA ACTCCAA AAGATAACTTAAAAG SYO3AOP1_1455 1499781 - 1500617 + | cytochrome c class I TERM 965 1500650 - 1500666 + T 100 -10.8 -5.63517 | ACCTCCCTAATCCTT GCCCGC TTCAC GCGGGC TTTTTTATTTGAAAG TERM 966 1501292 - 1501308 + T 76 -5.2 -5.12068 | opp_overlap 1501292 TCGAAGTCTAACAAG CTGATA GGAAA TATCAG TTTTTGTTAGATGTA SYO3AOP1_1456 1501951 - 1501400 - | orotate phosphoribosyltransferase SYO3AOP1_1457 1502706 - 1501954 - | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase SYO3AOP1_1458 1504040 - 1502703 - | small GTP-binding protein TERM 967 1502865 - 1502847 - G 71 -3.1 -5.24003 | AACAAAAAGTAAAAA TGCAGGT GGTTT ACCTTCA AGCTGCGTAGCATAG TERM 968 1503104 - 1503115 + g 77 -3 -5.60993 | TAACTTGTTTTTCTA CTTT TTCT AAAG TTTTTTTATCAACAG SYO3AOP1_1459 1504137 - 1504658 + | protein of unknown function DUF29 SYO3AOP1_1460 1504651 - 1505337 + | 3-dehydroquinate dehydratase, type I SYO3AOP1_1461 1505340 - 1505891 + | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen TERM 969 1506028 - 1506038 + T 91 -5.4 -5.81412 | overlap 1506010 1506008 TGAGGACGTAAGTCC GAAG GAT CTTC TTTTTTTTAAATAAG SYO3AOP1_1462 1509990 - 1506169 - | hypothetical protein TERM 970 1508834 - 1508854 + g 74 -5.5 -4.90266 | opp_overlap 1508848, overlap 1508848 AGAATTTCATCTTTA TGTTTTAAC AGA GATAAAACA TTTTTAATTGATGAA SYO3AOP1_1463 1510046 - 1511035 + | TPR repeat-containing protein TERM 971 1511235 - 1511223 - f 74 -6.3 -4.42238 | GGATGGCAAGGAAAA CTTGA TAA TCAAG CATATGAAAGAAGAA TERM 972 1512068 - 1512052 - g 75 -8.1 -3.71649 | CTTTGAAAGTGTAAA CATAGAT TTA ATCTATG GACTACCTTATCAGA TERM 973 1512229 - 1512207 - g 79 -4.8 -5.25893 | overlap 1512200 1512208 ATATAGATGAAAAAA CTCTTCCGCC ACC GGAGGAAAAA CTAAAAATTCTCCAA SYO3AOP1_1464 1511414 - 1512802 + | oxygen-independent coproporphyrinogen III oxidase SYO3AOP1_1465 1512799 - 1513620 + | protein of unknown function DUF815 SYO3AOP1_1466 1513633 - 1514364 + | hypothetical protein SYO3AOP1_1467 1514408 - 1515604 + | Three-deoxy-D-manno-octulosonic-acid transferase domain protein SYO3AOP1_1468 1515597 - 1516682 + | protein of unknown function DUF125 transmembrane SYO3AOP1_1469 1516695 - 1517558 + | domain of unknown function DUF1732 SYO3AOP1_1470 1518387 - 1518097 - | hypothetical protein SYO3AOP1_1471 1518990 - 1518400 - | oxidoreductase molybdopterin binding SYO3AOP1_1472 1519369 - 1518974 - | ferric uptake regulator, Fur family SYO3AOP1_1473 1519458 - 1522028 + | surface antigen (D15) SYO3AOP1_1474 1522052 - 1522402 + | twin-arginine translocation protein, TatB subunit SYO3AOP1_1475 1522395 - 1523174 + | Sec-independent protein translocase, TatC subunit TERM 974 1523545 - 1523564 + G 79 -6.6 -4.7339 | opp_overlap 1523544 AGTTTAGAAGATATT GATATTAA TTTT TTAATATC TTTTTCAGGTTTGTT SYO3AOP1_1476 1523191 - 1524402 + | putative signal transduction protein TERM 975 1524629 - 1524639 + G 70 -4 -5.00616 | TTTAATGAAGCTATA TCAA TTT TTGA TTTTTTGAGAAAAAA SYO3AOP1_1477 1524413 - 1525648 + | diguanylate cyclase SYO3AOP1_1478 1526725 - 1525913 - | histidine kinase TERM 976 1526421 - 1526438 + g 86 -5.7 -5.40004 | opp_overlap 1526421, overlap 1526419 ATCTGATTTATATTA TTTTCAA TATT TTGAAAA TTTTTTGCTTTCATC SYO3AOP1_1479 1527099 - 1526779 - | hypothetical protein SYO3AOP1_1480 1527751 - 1527092 - | two component transcriptional regulator, winged helix family SYO3AOP1_1481 1530291 - 1527748 - | Polynucleotide adenylyltransferase region SYO3AOP1_1482 1531748 - 1530420 - | peptidase U62 modulator of DNA gyrase TERM 977 1530974 - 1530985 + g 71 -3 -5.3104 | TTTTATTTATTTTAT CTTT AAAC AAAG TTTTATTTTTAATCA SYO3AOP1_1483 1532658 - 1532248 - | thioesterase superfamily protein SYO3AOP1_1484 1533049 - 1532636 - | hypothetical protein SYO3AOP1_1485 1533616 - 1533194 - | hypothetical protein SYO3AOP1_1486 1535002 - 1533629 - | Phosphoglucomutase SYO3AOP1_1487 1535516 - 1535013 - | hypothetical protein SYO3AOP1_1488 1535658 - 1535491 - | hypothetical protein SYO3AOP1_1489 1536189 - 1535698 - | hypothetical protein SYO3AOP1_1490 1536264 - 1537121 + | 4-hydroxybenzoate polyprenyltransferase SYO3AOP1_1491 1537124 - 1537555 + | beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ SYO3AOP1_1492 1538924 - 1537932 - | phosphoesterase RecJ domain protein TERM 978 1538369 - 1538384 + g 73 -4.6 -5.08824 | GCATTTTTGAAATGT GGTGCG GATT TGCGCC TTTTTTGACTAAAAA SYO3AOP1_1493 1539562 - 1538933 - | endonuclease III SYO3AOP1_1494 1540461 - 1539562 - | 5'-3' exonuclease SYO3AOP1_1495 1541428 - 1540451 - | Porphobilinogen synthase SYO3AOP1_1496 1541869 - 1541441 - | hypothetical protein SYO3AOP1_1497 1542597 - 1541887 - | protein of unknown function DUF558 SYO3AOP1_1498 1544154 - 1542985 - | nucleotide sugar dehydrogenase TERM 979 1545900 - 1545884 - g 87 -5.3 -5.65496 | CAGCAAAAAGAAAAA TTAATAA GAC TTATTAA AGAAGCCGGAAAAAT SYO3AOP1_1499 1544843 - 1545964 + | Radical SAM domain protein SYO3AOP1_1500 1545945 - 1546184 + | hypothetical protein SYO3AOP1_1501 1546865 - 1546383 - | peptidylprolyl isomerase FKBP-type TERM 980 1546911 - 1546886 - R 76 -3.3 -5.41746 | opp_overlap 1546892, overlap 1546888 1546890 AACTCCTTAAAAAAA TATTTAGTACC TTTT GGTACTATATG GCAATTCTTAAATAC SYO3AOP1_1502 1548200 - 1546953 - | Histidine--tRNA ligase TERM 981 1547195 - 1547211 + g 74 -2.3 -5.67283 | opp_overlap 1547195 CCGTTGTGTCAATTA TGTAAAA GTC TTTTTCA TTTTTTATTTCCGTT SYO3AOP1_1503 1548854 - 1548219 - | Phosphoglycerate mutase SYO3AOP1_1504 1550009 - 1548870 - | aminotransferase class V SYO3AOP1_1505 1550366 - 1550575 + | sulfur transfer protein involved in thiamine biosynthesis SYO3AOP1_1506 1550572 - 1551486 + | PP-loop domain protein SYO3AOP1_1507 1551483 - 1552145 + | Ribulose-phosphate 3-epimerase SYO3AOP1_1508 1552157 - 1552690 + | peptide deformylase SYO3AOP1_1509 1552700 - 1553482 + | prolipoprotein diacylglyceryl transferase SYO3AOP1_1510 1553466 - 1554707 + | FolC bifunctional protein SYO3AOP1_1511 1554682 - 1555533 + | tRNA pseudouridine synthase B TERM 982 1555888 - 1555877 - g 71 -3 -5.25803 | AACTTTTAGAAAAAA TCTT AAAA AAGA AAGATAAAATTAGAG SYO3AOP1_1512 1555852 - 1556988 + | hypothetical protein SYO3AOP1_1513 1556985 - 1557305 + | hypothetical protein SYO3AOP1_1514 1557293 - 1557610 + | TPR repeat-containing protein TERM 983 1557635 - 1557649 + G 76 -8.6 -3.53546 | opp_overlap 1557632 TAGTGATAAGATTTT CATCTC TTG GAGATG TTATCCTATCTTCTG SYO3AOP1_1515 1557622 - 1558569 + | glycosyl transferase family 9 TERM 984 1558567 - 1558587 + F 72 -8.5 -3.04398 | opp_overlap 1558570, overlap 1558566 1558570 CTGAAAAATTTGATA TAATAAAAC AGT GTTTTATTA ATTTTGAGGAAACAG SYO3AOP1_1516 1558604 - 1559086 + | NADH dehydrogenase (ubiquinone) 24 kDa subunit SYO3AOP1_1517 1559061 - 1560344 + | NADH dehydrogenase (quinone) TERM 985 1560437 - 1560426 - f 71 -3 -5.252 | CATGTTTACAAAAAA CATT AAAA AATG AGATCCTTCACTACG TERM 986 1560962 - 1560952 - f 75 -2.6 -5.63517 | opp_overlap 1560952 TTGGGAAAGAAAAAA TAAA GGT TTTA CTTGATAAACTCTGC SYO3AOP1_1519 1562188 - 1562733 + | putative periplasmic ligand-binding sensor protein TERM 987 1562827 - 1562796 - f 82 -10.2 -3.2534 | opp_overlap 1562793 AGGATGACAAGGTAA GGGTAGGGGCAATT CATG AATTGCCCTTACAC ATCATACGTTTATAG SYO3AOP1_1520 1562957 - 1563166 + | hypothetical protein SYO3AOP1_1521 1565288 - 1563393 - | transglutaminase domain protein SYO3AOP1_1522 1566153 - 1565272 - | protein of unknown function DUF58 SYO3AOP1_1523 1567067 - 1566150 - | ATPase associated with various cellular activities AAA_3 SYO3AOP1_1524 1567919 - 1567077 - | pantoate/beta-alanine ligase SYO3AOP1_1525 1568356 - 1567919 - | hypothetical protein SYO3AOP1_1526 1569027 - 1568362 - | Rhomboid family protein SYO3AOP1_1527 1570237 - 1569014 - | major facilitator superfamily MFS_1 TERM 988 1569354 - 1569344 - G 70 -4 -4.93696 | opp_overlap 1569325 TTTAAACATTAAAAA CATT ATA AATG AAACTATCAATACTA SYO3AOP1_1528 1571232 - 1570234 - | Glycerol-3-phosphate dehydrogenase (NAD(P)(+)) SYO3AOP1_1529 1572690 - 1571521 - | FAD-dependent pyridine nucleotide-disulphide oxidoreductase TERM 989 1572599 - 1572583 - G 74 -9.5 -2.71097 | overlap 1572580 AATTGGATAAATGTA CAGATAG TCT CTATCTG AAATAAGCTCAACTT TERM 990 1572836 - 1572826 - H 74 -5.4 -4.89729 | overlap 1572807 TATAAAATTTAAAAA GAAG GTC CTTC AAACTTACATTCTCG SYO3AOP1_1530 1573013 - 1573426 + | NUDIX hydrolase SYO3AOP1_1531 1574443 - 1573589 - | dTDP-4-dehydrorhamnose reductase SYO3AOP1_1532 1575042 - 1574446 - | putative serine/threonine protein kinase SYO3AOP1_1533 1575605 - 1575165 - | hypothetical protein SYO3AOP1_1534 1576227 - 1575616 - | outer membrane lipoprotein carrier protein LolA TERM 991 1576094 - 1576071 - G 83 -6 -5.24129 | opp_overlap 1576073, overlap 1576073 CCTTTCCATAAAAAA TATCTGGGCT GGAA AACCCAGATT GATAAGTTTTTTGTG TERM 992 1576092 - 1576073 - G 87 -8.6 -4.25873 | opp_overlap 1576073, overlap 1576071 TTTCCATAAAAAATA TCTGGGCT GGAA AACCCAGA TTGATAAGTTTTTTG SYO3AOP1_1535 1577036 - 1576227 - | thioredoxin TERM 993 1579394 - 1579406 + r 70 -6.3 -4.23781 | CAAACAATTAATTTT CAGTA AAA TACTG TTTGATTTTAATAAA TERM 994 1579511 - 1579488 - R 82 -7.6 -4.73388 | gap 1 AAGGTTGATGAAAAA TACTATCCTCC AAA GGAG-ATAGTA GAAAATGCTTGGGTT SYO3AOP1_1539 1581029 - 1579794 - | transposase mutator type TERM 995 1580997 - 1581017 + g 77 -4.1 -5.3236 | opp_overlap 1581002, overlap 1581000 CTCTGTGGATCTGTT TAATACTTT TTC AAAGTATTC TTTTTTATCCATTAT TERM 996 1581000 - 1581014 + g 74 -5.8 -4.73105 | opp_overlap 1581002, overlap 1580997 TGTGGATCTGTTTAA TACTTT TTC AAAGTA TTCTTTTTTATCCAT TERM 997 1582659 - 1582681 + H 100 -9.2 -5.9003 | AGATTTTTCTGAATG CCCTCCTT CTTCTGA AAGGAGGG TTTTTTTATTGATTT SYO3AOP1_1540 1582775 - 1584145 + | outer membrane porin TERM 998 1584254 - 1584240 - g 76 -7.2 -4.18294 | TAAAGGAAAGAACAA GGATAA TGA TTATCC TAACATTGGTTGAGC SYO3AOP1_1541 1584170 - 1584484 + | protein of unknown function DUF485 SYO3AOP1_1542 1584488 - 1586221 + | SSS sodium solute transporter superfamily TERM 999 1586233 - 1586252 + F 91 -10.7 -4.07568 | TTAATTAATTTTTAT GGTGGGC TTATCT GCCCACC TTTTACCGAAAGGAG TERM 1000 1586872 - 1586855 - g 84 -2.1 -6.19302 | ACATAAGAAAAAAAA TTATACT TCAA AATATAA GTACTTCTGAAAACG SYO3AOP1_1543 1586275 - 1588077 + | putative signal-transduction protein with CBS domains TERM 1001 1588300 - 1588279 - g 74 -7.4 -4.11623 | TACTATTAAATGAAA GGTTTAAC GTAATT GTTAAACC GGATAGAGAGATTAA SYO3AOP1_1544 1588074 - 1588685 + | Exonuclease RNase T and DNA polymerase III SYO3AOP1_1545 1588701 - 1589081 + | thioesterase superfamily protein TERM 1002 1589553 - 1589543 - g 84 -5.4 -5.40072 | GCGGGGTTAAAAAAA TCAG AGG CTGA AAGAGCGGTTAATGT SYO3AOP1_1546 1589489 - 1589767 + | histone family protein DNA-binding protein TERM 1003 1589777 - 1589795 + T 100 -10.3 -4.87273 | opp_overlap 1589771 AAATAATATTTATAT GGGAGGA GTCAA TCCTCCC TTTTTATAACATATT SYO3AOP1_1547 1590585 - 1589836 - | ABC-3 protein TERM 1004 1590176 - 1590163 - G 74 -3.1 -5.4182 | AATCACAAATAAAAA CAATC CTAA GACTG TATATAAAATAGCTG TERM 1005 1590338 - 1590348 + g 86 -4 -5.7946 | ATAAAGCCCTCTACG GAAA CTT TTTC TTTTTTTGTTGCAAA TERM 1006 1590463 - 1590442 - G 86 -10.1 -3.719 | opp_overlap 1590442 1590441, overlap 1590440 AAAAAAGAAAAGAGA GACTGCCGC TCCT GCAGCAGCC ATTTGTCCAATAGAT SYO3AOP1_1548 1591466 - 1590582 - | periplasmic solute binding protein SYO3AOP1_1549 1592903 - 1591482 - | hypothetical protein TERM 1007 1593421 - 1593394 - H 71 -7.8 -3.40639 | opp_overlap 1593393, overlap 1593399 AAGGTGAGCAAGTAA GTAGAGGCAATT CATG AATTGCCCATAC ATTGAATAAGTGAGA TERM 1008 1593416 - 1593399 - H 71 -8.5 -2.97613 | opp_overlap 1593393, overlap 1593394 GAGCAAGTAAGTAGA GGCAATT CATG AATTGCC CATACATTGAATAAG SYO3AOP1_1550 1593549 - 1594442 + | Tetratricopeptide TPR_2 repeat protein SYO3AOP1_1551 1594439 - 1595413 + | glycosyl transferase family 2 SYO3AOP1_1552 1595414 - 1596292 + | hypothetical protein SYO3AOP1_1553 1598042 - 1596720 - | hypothetical protein TERM 1009 1597606 - 1597620 + g 72 -5.8 -4.40221 | opp_overlap 1597606 1597605, overlap 1597600 AATAAGTCTTCAAAT TTTTGA TTT TCAAAA TTTTCGGTTTCATTT SYO3AOP1_1554 1598140 - 1598637 + | TrkA-C domain protein SYO3AOP1_1555 1598637 - 1599812 + | sodium/hydrogen exchanger SYO3AOP1_1556 1600928 - 1599942 - | transposase IS116/IS110/IS902 family protein SYO3AOP1_1557 1602713 - 1601499 - | sodium/hydrogen exchanger SYO3AOP1_1558 1604436 - 1602715 - | NAD+ synthetase TERM 1010 1604226 - 1604242 + g 71 -2.3 -5.47218 | overlap 1604228 TATTTTCTTTTAATT TTTCTAA GTG TTGGAGA TTTTTTTCAATAAAA SYO3AOP1_1559 1606348 - 1604462 - | methionyl-tRNA synthetase TERM 1011 1606149 - 1606159 + g 71 -3.2 -5.2291 | overlap 1606150 TCTGCAAGCTCTTTT GGAG AAA TTCC TTTTTCTTCTGCTGT SYO3AOP1_1560 1606457 - 1608859 + | diguanylate cyclase/phosphodiesterase SYO3AOP1_1561 1610554 - 1609205 - | Glucose-6-phosphate isomerase TERM 1012 1609649 - 1609667 + g 89 -10.4 -3.7795 | overlap 1609658 AATTTGAGAGTGCTG GTCTATTG TTC CAATAGAC TTTAATGGAGTTTGA TERM 1013 1610127 - 1610107 - G 71 -6.9 -4.08692 | opp_overlap 1610110, overlap 1610110 TAAGTGTGGTTAAAA CTATTGCAA AGT TTGCAATTG TTTCGACAGTTGAAC TERM 1014 1610110 - 1610124 + g 72 -7.2 -3.9243 | opp_overlap 1610110 1610107 GTGTGGTTAAAACTA TTGCAA AGT TTGCAA TTGTTTCGACAGTTG TERM 1015 1611766 - 1611749 - g 74 -5.7 -4.64334 | AATCCGGCAATAAAA TTAAAGA TCTT TCTTTAA ATGAATCATTATCTG SYO3AOP1_1562 1610656 - 1612257 + | PEGA domain protein SYO3AOP1_1563 1612378 - 1612782 + | ATP synthase F1, epsilon subunit SYO3AOP1_1564 1614397 - 1613168 - | hypothetical protein TERM 1016 1615619 - 1615595 - g 85 -5.1 -5.66338 | AAAGATAATAAAAAA TTCAGAAAATC TTG GATATTCTAAA GCTATAAATCAAGGA TERM 1017 1616171 - 1616142 - g 76 -3.7 -5.33921 | gap 1, opp_overlap 1616143 1616161, overlap 1616144 1616145 AAACTAATCAAAAAA TAC-GGATATGGAA ACG TTCCAAATCCAATA GATTTGTTTATGAAA TERM 1018 1616168 - 1616144 - g 80 -7.9 -4.27681 | opp_overlap 1616143 1616161, overlap 1616142 1616145 ACTAATCAAAAAATA CGGATATGGAA ACG TTCCAAATCCA ATAGATTTGTTTATG TERM 1019 1616167 - 1616145 - g 74 -9.2 -3.14982 | opp_overlap 1616143 1616161, overlap 1616144 1616142 CTAATCAAAAAATAC GGATATGGAA ACG TTCCAAATCC AATAGATTTGTTTAT SYO3AOP1_1565 1614465 - 1617377 + | glycosyl transferase family 2 TERM 1020 1617993 - 1617983 - g 70 -4 -4.98522 | AAGGGTATACAAAAA TCTT TGA AAGA ATGTTGAATCATCCA SYO3AOP1_1566 1617379 - 1618527 + | UDP-galactopyranose mutase SYO3AOP1_1567 1618524 - 1619552 + | hypothetical protein SYO3AOP1_1568 1622042 - 1619751 - | MutS2 family protein SYO3AOP1_1569 1622413 - 1622039 - | nucleotidyltransferase substrate binding protein, HI0074 family SYO3AOP1_1570 1622718 - 1622410 - | DNA polymerase beta domain protein region TERM 1021 1622523 - 1622535 + g 74 -6.3 -4.54047 | overlap 1622512 GATTTTCAAGCTCTT CTTGA ATT TCAAG TTTTATGTGAGATGG SYO3AOP1_1571 1623699 - 1622719 - | UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase SYO3AOP1_1572 1624682 - 1623747 - | hypothetical protein TERM 1022 1624097 - 1624079 - G 70 -3.8 -5.09245 | CTAAAATGATAAAAA CACAACCA TCT TGATAGTG TTCAAAAACCTTCTT SYO3AOP1_1573 1625190 - 1624693 - | outer membrane chaperone Skp (OmpH) TERM 1023 1625305 - 1625315 + r 71 -5.4 -4.65722 | CATTCTGAAGTCAGT GAAG AAT CTTC TTTCTTTCTCTCTCA SYO3AOP1_1574 1627796 - 1625436 - | outer membrane protein assembly complex, YaeT protein TERM 1024 1627084 - 1627094 + g 70 -4 -5.10163 | opp_overlap 1627084 GATGTTTCCATGACA GAAA GAA TTTC TTTTGTTTTAACGTT TERM 1025 1627772 - 1627795 + g 82 -8.8 -4.00057 | gap 1, opp_overlap 1627769 1627773, overlap 1627773 1627774 AAGATAATGAAAGTA AGGCGGCGGCT GAA AGC-GCCGCCA CTTTTTTTATGCTGT TERM 1026 1627794 - 1627773 - G 95 -12.3 -3.64257 | gap 1, opp_overlap 1627772 1627773 1627774, overlap 1627769 AGATAATGAAAGTAA GGCGGCGGCT GAA AGC-GCCGCC ACTTTTTTTATGCTG TERM 1027 1627773 - 1627794 + g 90 -12.3 -2.98407 | gap 1, opp_overlap 1627773 1627769, overlap 1627772 1627774 AGATAATGAAAGTAA GGCGGCGGCT GAA AGC-GCCGCC ACTTTTTTTATGCTG TERM 1028 1627774 - 1627796 + g 100 -7.6 -5.69473 | opp_overlap 1627773 1627769, overlap 1627773 1627772 GATAATGAAAGTAAG GCGGCGGC TGAAAGC GCCGCCAC TTTTTTTATGCTGTC SYO3AOP1_1575 1630246 - 1627802 - | ATPase AAA-2 domain protein TERM 1029 1628758 - 1628773 + g 76 -3.3 -5.38958 | TCTTATGTAATTCTT CTTCT ATATGC AGAAG TTTTTCTTTATCAGT TERM 1030 1629560 - 1629580 + g 74 -3.9 -5.31059 | overlap 1629563 AGCTATTATTCTTTT GTTCCAGAG AAT TTCTGGTGC TTTTTTGCTTACTAT SYO3AOP1_1576 1630964 - 1630293 - | ABC transporter related SYO3AOP1_1577 1632162 - 1630957 - | protein of unknown function DUF214 TERM 1031 1633182 - 1633167 - g 71 -5.4 -4.64844 | opp_overlap 1633167 CCGATAGATATAAAA CTCCTA TCCC CAGGAG CTTCTTACTGTTTCC TERM 1032 1633372 - 1633362 - g 80 -5.4 -5.28481 | GATGCAAGGAAAAAA GCAA AAC TTGC AGCTGAAAGTATGAA SYO3AOP1_1578 1632222 - 1633400 + | phosphoribosylglycinamide formyltransferase 2 SYO3AOP1_1579 1633720 - 1634277 + | cytochrome c class I SYO3AOP1_1580 1634293 - 1634415 + | hypothetical protein TERM 1033 1634433 - 1634465 + F 73 -9.3 -2.84708 | overlap 1634432 1634429 AAATTTTAGGCTTCA TTCCCAATCTCTT GAGTTAA AAGAGGTTGGGAG GTTAATTTTAATTAA SYO3AOP1_1581 1634760 - 1635008 + | hypothetical protein TERM 1034 1635500 - 1635490 - g 84 -5.4 -5.4492 | overlap 1635492 CATAGATATAAAAAA GATG CCC CATC TGGCACAGCGGTTAA SYO3AOP1_1582 1635001 - 1635807 + | Dihydrodipicolinate reductase SYO3AOP1_1583 1635800 - 1636015 + | ATP synthase protein I SYO3AOP1_1584 1636717 - 1636421 - | transcriptional regulator, AsnC family TERM 1035 1636643 - 1636655 + g 84 -3.3 -5.76237 | opp_overlap 1636643 1636644, overlap 1636644 TTCAATTAAAACATA GGCAG ATG CTGCA TTTTTTATTTCTATA TERM 1036 1636644 - 1636654 + g 71 -6.8 -4.03302 | opp_overlap 1636643 1636644, overlap 1636643 TCAATTAAAACATAG GCAG ATG CTGC ATTTTTTATTTCTAT SYO3AOP1_1585 1638077 - 1636731 - | heat shock protein HslVU, ATPase subunit HslU SYO3AOP1_1586 1639761 - 1638088 - | transposase TERM 1037 1639605 - 1639629 + g 71 -2.9 -5.27476 | opp_overlap 1639605, overlap 1639607 TGTTTATGTTAAATA GTTTTGATAAA TAT TTTTTCAAATC TTTTCTTTTCTTGCC SYO3AOP1_1587 1641723 - 1639825 - | acetate/CoA ligase SYO3AOP1_1588 1642684 - 1642010 - | Methyltransferase type 11 SYO3AOP1_1589 1644132 - 1642669 - | cysteinyl-tRNA synthetase SYO3AOP1_1590 1644274 - 1645431 + | DNA methylase N-4/N-6 domain protein SYO3AOP1_1591 1645406 - 1646101 + | DNA modification methylase SYO3AOP1_1592 1646266 - 1646126 - | hypothetical protein SYO3AOP1_1593 1647041 - 1646259 - | hypothetical protein SYO3AOP1_1594 1647100 - 1647282 + | hypothetical protein SYO3AOP1_1595 1648188 - 1647553 - | electron transport protein SCO1/SenC TERM 1038 1648437 - 1648452 + r 81 -3.2 -5.74684 | overlap 1648441 ATGTCATTCTGAAGC TGGCGA AGAA TCTCCA TTTTTCTTTTTATTC TERM 1039 1648441 - 1648458 + r 72 -3.5 -5.24551 | overlap 1648437 CATTCTGAAGCTGGC GAAGAAT CTCC ATTTTTC TTTTTATTCCTTTCA SYO3AOP1_1596 1649747 - 1648728 - | Agmatine deiminase SYO3AOP1_1597 1650164 - 1649751 - | hypothetical protein SYO3AOP1_1598 1650261 - 1652123 + | glucose inhibited division protein A SYO3AOP1_1599 1652728 - 1652471 - | RNA chaperone Hfq SYO3AOP1_1600 1653687 - 1652740 - | ADP-ribosylation/Crystallin J1 SYO3AOP1_1601 1655423 - 1653690 - | lysyl-tRNA synthetase TERM 1040 1655539 - 1655550 + r 73 -4.4 -5.05228 | GTTATTCTGCAGCCG GAGA AGAA TCTC TTTTTATCCTTTACT SYO3AOP1_1602 1657501 - 1655585 - | diguanylate cyclase/phosphodiesterase SYO3AOP1_1603 1657986 - 1657498 - | hypothetical protein SYO3AOP1_1604 1659901 - 1657988 - | hypothetical protein SYO3AOP1_1605 1661090 - 1660380 - | succinate dehydrogenase and fumarate reductase iron-sulfur protein TERM 1041 1660733 - 1660745 + g 70 -6.3 -4.19746 | opp_overlap 1660733 1660744 AATCCTCAGGATAAA CCTTT TCA AAAGG TTCTTTTGGAATAAA SYO3AOP1_1606 1661638 - 1663728 + | TonB-dependent receptor TERM 1042 1663763 - 1663785 + T 100 -10.6 -4.87273 | overlap 1663760 1663766 CAACCTCTTTGTCTT CAAGGGAGCT TTA AGCTCCCTTA TTTTTATACAATCTT TERM 1043 1663766 - 1663782 + T 100 -12.3 -4.53475 | overlap 1663760 1663763 CCTCTTTGTCTTCAA GGGAGCT TTA AGCTCCC TTATTTTTATACAAT SYO3AOP1_1607 1664064 - 1663789 - | hypothetical protein TERM 1044 1665338 - 1665320 - g 80 -7.4 -4.60648 | AAAATAGTAAACAAA GAAGTTCC GGA GGAGCTTC AAAATAAAAAGGTGT SYO3AOP1_1608 1664228 - 1667212 + | ATPase AAA-2 domain protein TERM 1045 1667221 - 1667243 + T 80 -10.5 -2.69057 | overlap 1667220 1667218 AAGTTAGTTTTACAG CCCCGGGTC TTGAT GGCTCGGGG ATATTATATTTCAAG SYO3AOP1_1609 1668041 - 1667247 - | exodeoxyribonuclease III Xth TERM 1046 1667605 - 1667625 + g 89 -8.5 -4.54727 | CCAAGTAACATTATC TTTTGATTT TCA AAATCAAAA TTTTCCTTTAGAAAG SYO3AOP1_1610 1668328 - 1668038 - | hypothetical protein TERM 1047 1668865 - 1668852 - g 71 -6.7 -4.11692 | overlap 1668858 GAGGGAGCTTTAAAA CCAAG AGGA CTTGG ACCGATTGAGCATAG SYO3AOP1_1611 1668471 - 1669007 + | hypothetical protein SYO3AOP1_1612 1672582 - 1669550 - | acriflavin resistance protein TERM 1048 1670676 - 1670687 + g 71 -3 -5.15381 | ACGTTTATATCTGCG TTTG GAAA CAAA TTTTTTAAATCTCTT TERM 1049 1671675 - 1671687 + g 82 -4.9 -5.39721 | GGAAGAATATGCCGA TTCAA TTC TTGAA TTTTTTCTCTAATAG SYO3AOP1_1613 1673619 - 1672579 - | efflux transporter, RND family, MFP subunit SYO3AOP1_1614 1674845 - 1673616 - | outer membrane efflux protein TERM 1050 1674146 - 1674170 + g 77 -8 -3.92869 | overlap 1674149 TTTCTGTTGCTTTTT GAACTAAATC ATCAA GATTTGGTTC TTTAGTATCTATATT SYO3AOP1_1615 1676410 - 1675298 - | GTP-binding protein YchF SYO3AOP1_1616 1676675 - 1676469 - | hypothetical protein SYO3AOP1_1617 1677858 - 1676722 - | Outer membrane protein-like protein TERM 1051 1676982 - 1676994 + g 82 -4.9 -5.3798 | opp_overlap 1676982 TATATTTTAAATTGA TTAGA AGT TCTAA TTTTTGTTCTTGTTG TERM 1052 1677239 - 1677261 + g 82 -10 -3.32022 | TTAATCAATGGGCTA GCTGTTTCTA CCT TAGAAATAGC TTCATCTATAGAAAA TERM 1053 1678240 - 1678221 - R 76 -7.1 -4.16921 | opp_overlap 1678219 1678221 GAATAATTTTTAAAA CCCGGGA TTTGAG TCCCGAG TCTATAATTTTAGTT SYO3AOP1_1618 1679678 - 1678254 - | ATP synthase F1, beta subunit SYO3AOP1_1619 1680574 - 1679699 - | ATP synthase F1, gamma subunit TERM 1054 1680221 - 1680246 + g 76 -6.1 -4.70879 | opp_overlap 1680226, overlap 1680223 TTTTCTACCAATTAG GAGAAGGCTAA CTTC TTTGCCTTCAC TTTTTAACCTTTGAA SYO3AOP1_1620 1682100 - 1680586 - | ATP synthase F1, alpha subunit SYO3AOP1_1621 1682671 - 1682123 - | ATP synthase F1, delta subunit SYO3AOP1_1622 1683215 - 1682673 - | H+transporting two-sector ATPase B/B' subunit SYO3AOP1_1623 1683652 - 1683212 - | H+transporting two-sector ATPase B/B' subunit SYO3AOP1_1624 1683827 - 1684504 + | peptidase M50 TERM 1055 1684614 - 1684647 + T 76 -9.7 -3.01712 | CATATTTCTCAATTC CTCGTCTTTTCTTCT TAAA AGAGGAAAAGGAGAG TCTTCGGAGCAGAGC SYO3AOP1_1625 1685460 - 1684843 - | hypothetical protein SYO3AOP1_1626 1686243 - 1685710 - | hypothetical protein SYO3AOP1_1627 1687162 - 1686410 - | Patatin SYO3AOP1_1628 1688699 - 1687164 - | GMP synthase, large subunit SYO3AOP1_1629 1689019 - 1688717 - | hypothetical protein SYO3AOP1_1630 1690431 - 1689016 - | YD repeat protein SYO3AOP1_1631 1691523 - 1690471 - | flagellar biosynthetic protein FlhB TERM 1056 1690828 - 1690839 + g 77 -4.4 -5.20331 | CTTGACTAACAGGTT TCCT TCGT AGGA TTTTCTTTCTTCTTT SYO3AOP1_1632 1692300 - 1691527 - | flagellar biosynthetic protein FliR SYO3AOP1_1633 1692577 - 1692308 - | flagellar biosynthetic protein FliQ SYO3AOP1_1634 1693605 - 1692592 - | flagellar biosynthetic protein FliP SYO3AOP1_1635 1694144 - 1693866 - | hypothetical protein SYO3AOP1_1636 1694404 - 1694141 - | surface presentation of antigens (SPOA) protein SYO3AOP1_1637 1694929 - 1694420 - | flagellar basal body-associated protein FliL SYO3AOP1_1638 1696212 - 1694971 - | protein of unknown function DUF1078 domain protein TERM 1057 1695703 - 1695728 + g 86 -5.7 -5.34365 | gap 1, opp_overlap 1695707 1695708, overlap 1695707 1695708 1695717 ATTTGATCTTGAGTC TAAAT-TTGTTG GTT CAACAAGATTTA TTTTTGTTGTTATCG SYO3AOP1_1639 1696882 - 1696226 - | flagellar hook capping protein SYO3AOP1_1640 1698192 - 1696879 - | flagellar protein export ATPase FliI TERM 1058 1697244 - 1697258 + gr 74 -8.6 -3.19038 | opp_overlap 1697244 CATCTAAAAATGAAA TAGCAG CAT CTGCTA TTGGGTCATTTTGAA TERM 1059 1697258 - 1697244 - GR 87 -8.6 -4.33653 | opp_overlap 1697244 CATCTAAAAATGAAA TAGCAG CAT CTGCTA TTGGGTCATTTTGAA SYO3AOP1_1641 1698829 - 1698152 - | hypothetical protein TERM 1060 1698641 - 1698665 + gr 86 -7.1 -4.8543 | opp_overlap 1698644 ATACTTTTCTTCCAA GGACTTTGTAG CAT CTTCAAAGCCC TTTTTATAAGCATTC SYO3AOP1_1642 1700436 - 1698826 - | flagellar M-ring protein FliF SYO3AOP1_1643 1700735 - 1700451 - | flagellar hook-basal body complex subunit FliE SYO3AOP1_1644 1701164 - 1700754 - | flagellar basal-body rod protein FlgC SYO3AOP1_1645 1701546 - 1701178 - | flagellar basal-body rod protein FlgB SYO3AOP1_1646 1703483 - 1701546 - | Tetratricopeptide domain protein TERM 1061 1702016 - 1702038 + g 78 -2 -5.77571 | opp_overlap 1702016 TAGATTTTGCAACAA TTGTGAAAAT ATA ATAATCACAA TTTTTATTTTTTACT SYO3AOP1_1647 1704865 - 1703480 - | hypothetical protein SYO3AOP1_1648 1705510 - 1704869 - | RNA polymerase, sigma 28 subunit, FliA/WhiG family SYO3AOP1_1649 1706606 - 1705740 - | Cobyrinic acid ac-diamide synthase TERM 1062 1705766 - 1705782 + g 83 -6.7 -4.91977 | AAGAAAACAGTTTTT TAAAGAA GCT TTCTTTA TTTTCTCTTTTGATA SYO3AOP1_1650 1707802 - 1706603 - | GTP-binding signal recognition particle SRP54 G- domain SYO3AOP1_1651 1709873 - 1707792 - | flagellar biosynthesis protein FlhA SYO3AOP1_1652 1710304 - 1709876 - | hypothetical protein SYO3AOP1_1653 1711409 - 1710318 - | flagellar P-ring protein TERM 1063 1711517 - 1711544 + r 100 -12.8 -3.52506 | opp_overlap 1711509, overlap 1711515 GATAACATTACTTTC GTAAGGGCGATT CATG AATCGCCCCTAC TCTTTCACTTTCATT SYO3AOP1_1654 1712517 - 1711846 - | flagellar L-ring protein SYO3AOP1_1655 1713034 - 1712522 - | Flagellar basal body P-ring biosynthesis protein-like protein SYO3AOP1_1656 1714094 - 1713294 - | flagellar basal-body rod protein FlgG SYO3AOP1_1657 1714826 - 1714116 - | flagellar basal body rod protein TERM 1064 1714694 - 1714709 + g 70 -4 -5.00616 | overlap 1714695 GTATCTTTTGACTCA TTTCTC TAAC GAGAAG TTTTTTAAAGCCGGG SYO3AOP1_1658 1715414 - 1714830 - | flagellar motor switch protein FliN SYO3AOP1_1659 1716366 - 1715398 - | flagellar motor switch protein FliM TERM 1065 1716293 - 1716312 + g 77 -8.6 -3.65529 | TTTTCTTTTATTTTT TCTTCTGC AGTT GCGGAAGA TTTACCTCCACCTAT SYO3AOP1_1660 1717417 - 1716395 - | flagellar motor switch protein FliG TERM 1066 1717026 - 1717037 + g 73 -4.4 -5.00412 | ATTAAAGCAATAACT TGAG GATG CTCA TTTTTAATTATATTT SYO3AOP1_1661 1717851 - 1717636 - | hypothetical protein TERM 1067 1717864 - 1717874 + r 72 -2.6 -5.46129 | CATTTCTATCTACCT TTTA TTT TAAA TTTTTTCATTTCTTC SYO3AOP1_1662 1719506 - 1717854 - | methyl-accepting chemotaxis sensory transducer TERM 1068 1718506 - 1718526 + g 76 -5.5 -5.02231 | AAATTATCTCTTACT TCAATAACA AAT TGTTCTTGA TTTTTCATATTTTTG TERM 1069 1719001 - 1719014 + g 70 -3.9 -5.00467 | opp_overlap 1719001 CCATATATTTGAAAC TTTGA TATA TCAAA TTTTATTGTTATTGC SYO3AOP1_1663 1722997 - 1719563 - | reverse gyrase TERM 1070 1720438 - 1720459 + g 77 -8.1 -3.83214 | overlap 1720441 CTGTTCTGTATGGTG GAAGAGGAT TTTT ATCTTCTTC TTTAACTTCCTTTAC TERM 1071 1723011 - 1723027 + r 77 -3.1 -5.58522 | ATTATTTTCTACCTC TTTTGAT CTG ATTAAAA TTTTTGTTTTGTGTA SYO3AOP1_1664 1723625 - 1723251 - | endoribonuclease L-PSP TERM 1072 1723628 - 1723646 + r 70 -4.6 -4.91873 | opp_overlap 1723632, overlap 1723632 ATATTGCTTGCATCT TAAATCTC CTT GAGATCTA TTTTTCCTTCGTATA SYO3AOP1_1665 1724346 - 1723627 - | phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase SYO3AOP1_1666 1724928 - 1724443 - | hypothetical protein SYO3AOP1_1667 1725653 - 1724925 - | RNA polymerase, sigma 28 subunit, FliA/WhiG SYO3AOP1_1668 1726142 - 1725777 - | holo-acyl-carrier-protein synthase TERM 1073 1726260 - 1726274 + r 71 -7.8 -3.41051 | opp_overlap 1726260 1726259 AGTAGGAGTATAAAG GCGGAG ATT CTTCGC TTATGCTCAGAATGA SYO3AOP1_1669 1730051 - 1726422 - | hypothetical protein TERM 1074 1726748 - 1726772 + g 74 -7.9 -3.76969 | opp_overlap 1726746 1726748 TGAAAATACCCAAGA GATACTTACGA ATA TCGGAGGTATC TTCATTTGTTGTTAT TERM 1075 1729316 - 1729332 + g 79 -5.1 -5.19916 | overlap 1729310 1729314 AGTTATCACCTTTGC CAAAGTC TTT GACTATG TTTTTTAGCTCTTTT SYO3AOP1_1670 1733583 - 1730254 - | helicase domain protein TERM 1076 1730800 - 1730810 + g 70 -4.6 -4.84527 | CTCGTTTTTGTCAGA CTGC TTA GCGG TTTTTACTCTATGAG TERM 1077 1733487 - 1733461 - G 85 -10.4 -3.51161 | overlap 1733450 TAAAGTTTCATAGAA TTCTTTTATTCC TGA GAAATAAAAGAA CCCAACGAGAAATTT SYO3AOP1_1671 1734165 - 1734905 + | 3-oxoacyl-(acyl-carrier-protein) reductase SYO3AOP1_1672 1734934 - 1735167 + | acyl carrier protein TERM 1078 1735571 - 1735551 - g 71 -8.3 -3.28592 | opp_overlap 1735551 1735555, overlap 1735549 1735548 1735555 GTAATGGAAAAAGGA GTAAGGAGA GTT TCTCCTTTC TTTATCCCTTCTGGA TERM 1079 1735551 - 1735571 + G 79 -8.3 -4.00066 | opp_overlap 1735551 1735549 1735548 1735555, overlap 1735555 GTAATGGAAAAAGGA GTAAGGAGA GTT TCTCCTTTC TTTATCCCTTCTGGA TERM 1080 1735567 - 1735555 - g 71 -7.7 -3.4158 | opp_overlap 1735551 1735555, overlap 1735551 1735549 1735548 TGGAAAAAGGAGTAA GGAGA GTT TCTCC TTTCTTTATCCCTTC TERM 1081 1735555 - 1735567 + G 82 -7.7 -4.59089 | opp_overlap 1735555 1735551 1735549 1735548, overlap 1735551 TGGAAAAAGGAGTAA GGAGA GTT TCTCC TTTCTTTATCCCTTC TERM 1082 1736264 - 1736252 - g 80 -6.3 -4.81083 | TTTAACTATCAAAAA TGGAA TTA TTCCA CCAACAATAAACTAC SYO3AOP1_1673 1735173 - 1736417 + | 3-oxoacyl-(acyl-carrier-protein) synthase 2 TERM 1083 1736716 - 1736730 + G 74 -8.6 -3.33261 | overlap 1736727 TATAGGTCTGCTATT GTAAGC GAA GCTTAC TTGTCAAAATTGGCA SYO3AOP1_1674 1736428 - 1737177 + | Ribonuclease III SYO3AOP1_1675 1737183 - 1737914 + | pyridoxal phosphate biosynthetic protein PdxJ SYO3AOP1_1676 1737947 - 1739761 + | glucosamine/fructose-6-phosphate aminotransferase, isomerizing TERM 1084 1739778 - 1739766 - f 72 -3.5 -5.21709 | CGGTAGAGTAAAAAA TTATA AGT TATAA AACATAGGCAGTTAA SYO3AOP1_1677 1739874 - 1740824 + | Tfp pilus assembly protein ATPase PilM-like protein SYO3AOP1_1678 1740821 - 1741435 + | Fimbrial assembly family protein SYO3AOP1_1679 1741435 - 1742115 + | hypothetical protein SYO3AOP1_1680 1742170 - 1742403 + | hypothetical protein TERM 1085 1742767 - 1742791 + T 76 -9.4 -3.16144 | gap 1, overlap 1742766 GGTTTTAGCAATTCC TCCCCTACCTT TTGT AAGGT-GGGGA CTTTCTTGCTAATAT SYO3AOP1_1681 1744523 - 1742829 - | RNA binding metal dependent phosphohydrolase SYO3AOP1_1682 1745074 - 1744526 - | 5-formyltetrahydrofolate cyclo-ligase SYO3AOP1_1683 1747772 - 1745361 - | phenylalanyl-tRNA synthetase, beta subunit TERM 1086 1746154 - 1746189 + g 73 -7.8 -3.70405 | opp_overlap 1746153 AGGCTAACTACAATC CTATCTCTTAAAATGC TGTG GGATTTTAAGATATAG TTAGTTATTTTAATC SYO3AOP1_1684 1748803 - 1747769 - | phenylalanyl-tRNA synthetase, alpha subunit SYO3AOP1_1685 1749173 - 1748817 - | ribosomal protein L20 SYO3AOP1_1686 1749409 - 1749203 - | ribosomal protein L35 TERM 1087 1749281 - 1749295 + g 72 -3.6 -5.30189 | overlap 1749283 CTTTCTTCCTTGTCT TTTTCT TTT AGAAGA TTTTTTAGTGTTGTA SYO3AOP1_1687 1749956 - 1750549 + | ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 SYO3AOP1_1688 1750550 - 1751119 + | Aminoacyl-tRNA hydrolase TERM 1088 1751126 - 1751151 + F 73 -9 -2.94144 | overlap 1751124 TTAGTATGAAGCCTT GCTTTCCTGC AAATTG GCGGGAAGGC TGATTTACATAAAAA TERM 1089 1751498 - 1751475 - g 76 -5.2 -5.02715 | ACATGAAATTAAAAA CTCCTAAAGC TACT GCTAAAGGAG AATAAAGAGGTGGCA SYO3AOP1_1689 1751189 - 1751503 + | ribosomal protein S6 SYO3AOP1_1690 1751519 - 1751932 + | single-strand binding protein TERM 1090 1752026 - 1752006 - g 85 -2.5 -6.28401 | overlap 1752008 1752015 CAAAAAAGAAAAAAA TACTGCAAA TTC TGTGCAGAA AAAAAAGAGCCAAAT TERM 1091 1752172 - 1752159 - g 93 -6.7 -5.37593 | opp_overlap 1752159 GTTGAAATTAAAAAA GCAAG ACAA CTTGC TTTAATACCTTACGT SYO3AOP1_1691 1751958 - 1752197 + | ribosomal protein S18 SYO3AOP1_1692 1752209 - 1752658 + | ribosomal protein L9 TERM 1092 1752728 - 1752682 - g 75 -8.2 -3.72363 | gap 1, opp_overlap 1752676 1752686 CATGGAAACTCTAAA GGATTTGCCCTTCCTGCCT TATGATGAGG ATGCAGAAAGGGCAA-TCC TTGGAAGTTTAATCG TERM 1093 1753354 - 1753375 + G 85 -6.6 -4.98255 | ACATCATTTATCCGT TGTAGACG AAGTTC CGTCTGCA TTTTTCTCATTAGAA TERM 1094 1753997 - 1753974 - g 74 -6.2 -4.50627 | CATTCATCAAAGAAA TAACTAAATT TGAA AATTTAGCTA AAACAAGTCATAATA SYO3AOP1_1693 1752668 - 1754080 + | replicative DNA helicase SYO3AOP1_1694 1754082 - 1754825 + | protein of unknown function DUF140 SYO3AOP1_1695 1754825 - 1755895 + | permease YjgP/YjgQ family protein SYO3AOP1_1696 1755934 - 1756668 + | RNA-binding S4 domain protein TERM 1095 1757731 - 1757743 + G 93 -4.8 -5.98675 | TTTGATGTCTTTTAT TCCG TTATC CGGA TTTTTTGTTTTTCTG SYO3AOP1_1697 1756661 - 1757788 + | major facilitator superfamily MFS_1 SYO3AOP1_1698 1758162 - 1757776 - | hypothetical protein TERM 1096 1758038 - 1758048 + g 74 -6.8 -4.29953 | opp_overlap 1758038 AGCTTAATAACATTA GGCT GAT AGCC TTCTTTTGATACTTT SYO3AOP1_1699 1758646 - 1760340 + | prolyl-tRNA synthetase SYO3AOP1_1700 1760333 - 1761184 + | putative PAS/PAC sensor protein TERM 1097 1761624 - 1761614 - g 87 -5.4 -5.56673 | AGTCACAACAAAAAA CCAA CTA TTGG AAAAAATAGACTCTC TERM 1098 1761641 - 1761631 - g 70 -4 -5.07053 | opp_overlap 1761631 AACTATTGGAAAAAA TAGA CTC TCTA TTTGAAGAAAAAGCT SYO3AOP1_1701 1761186 - 1762922 + | type II secretion system protein E SYO3AOP1_1702 1763172 - 1763561 + | thioesterase superfamily protein TERM 1099 1763727 - 1763715 - g 79 -3.5 -5.69068 | opp_overlap 1763715 TAAAAATAGAAAAAA TTAAT AAT ATTAA GTTTATCGAGAAATC SYO3AOP1_1703 1763558 - 1764295 + | 6-carboxyhexanoate/CoA ligase SYO3AOP1_1704 1764292 - 1764942 + | alpha/beta hydrolase fold protein TERM 1100 1765597 - 1765587 - g 83 -6.8 -4.88258 | opp_overlap 1765586 1765587 AAAATTACAATAAAA CAGC GGT GCTG AATTTTAATGTATTG SYO3AOP1_1705 1764935 - 1765639 + | Methyltransferase type 11 SYO3AOP1_1706 1765954 - 1766190 + | hypothetical protein SYO3AOP1_1707 1766193 - 1767878 + | copper-resistance protein, CopA family SYO3AOP1_1708 1767875 - 1768588 + | copper resistance B precursor SYO3AOP1_1709 1769356 - 1768934 - | hypothetical protein SYO3AOP1_1710 1770748 - 1769369 - | magnesium transporter TERM 1101 1769471 - 1769484 + g 78 -6.7 -4.44245 | ACCGGTTGCTAAGGT TGGGT CTTT ACCCA TTTTATCCATAATAT SYO3AOP1_1711 1771686 - 1770763 - | GTP-binding protein Era SYO3AOP1_1712 1772671 - 1771940 - | tRNA pseudouridine synthase A TERM 1102 1772997 - 1773014 + r 82 -9.8 -3.66058 | opp_overlap 1772997 TTATAAAACAAAAAA GGCGGG ACTATG CCCGCC TTGTGTATGTAATAT TERM 1103 1773014 - 1772997 - R 100 -9.8 -5.86976 | opp_overlap 1772997 TTATAAAACAAAAAA GGCGGG ACTATG CCCGCC TTGTGTATGTAATAT SYO3AOP1_1713 1774283 - 1773045 - | hypothetical protein TERM 1104 1773361 - 1773371 + g 74 -6.8 -4.27316 | ACTGGAACTTGAACG CCAG CTA CTGG TTTTACGTTAGCACA SYO3AOP1_1714 1774658 - 1775896 + | transposase mutator type SYO3AOP1_1715 1777056 - 1776163 - | UDP-3-0-acyl N-acetylglucosamine deacetylase SYO3AOP1_1717 1778453 - 1779058 + | regulatory protein MerR TERM 1105 1780576 - 1780548 - g 71 -8.3 -3.24386 | AAAAGCGACTACGAA TTCTGTAGGCT ACTTAAA AACCTACAGAA TAGTGGGTCGGGTAA TERM 1106 1780635 - 1780651 + G 76 -5.2 -5.07486 | opp_overlap 1780635 TCGCAGTCTAACAAG CTGATA GAAAA TATCAG TTTTTGTTAGGCGTA SYO3AOP1_1718 1779045 - 1780661 + | transposase, IS605 OrfB family SYO3AOP1_1719 1780685 - 1781560 + | hypothetical protein SYO3AOP1_1720 1782170 - 1781631 - | Holliday junction DNA helicase RuvA SYO3AOP1_1721 1783227 - 1782163 - | radical SAM enzyme, Cfr family TERM 1107 1783195 - 1783207 + g 72 -3.5 -5.16572 | opp_overlap 1783202, overlap 1783197 AAAATTTTCAAGCTC TTTTA AAT TAAAA TTTTTTAAATTAACT SYO3AOP1_1722 1783636 - 1783217 - | Mov34/MPN/PAD-1 family protein SYO3AOP1_1723 1784191 - 1783748 - | hypothetical protein TERM 1108 1783940 - 1783956 + g 70 -7.3 -3.58343 | opp_overlap 1783940 1783939, overlap 1783936 GTAAGATAAACCAAT CAAAGGT TGT GCCTTTG TTTCAACCTGATCGC SYO3AOP1_1724 1784349 - 1785032 + | orotidine 5'-phosphate decarboxylase SYO3AOP1_1725 1785032 - 1786606 + | DNA methylase N-4/N-6 domain protein TERM 1109 1786780 - 1786790 + G 71 -5.4 -4.56597 | ATTAAATACATCTTT TGGA ACA TCCA TTTTTGAACCAGCAG SYO3AOP1_1726 1786607 - 1787392 + | type II restriction endonuclease TdeIII SYO3AOP1_1727 1787389 - 1788708 + | RNA polymerase, sigma 54 subunit, RpoN TERM 1110 1789073 - 1789061 - g 74 -6.3 -4.47686 | TTAGAAAAAATGAAA GAACA TAC TGTTC AAGAATCTTCAATAG SYO3AOP1_1728 1788710 - 1789273 + | sigma 54 modulation protein/ribosomal protein S30EA TERM 1111 1789444 - 1789430 - f 78 -5.7 -4.92655 | AAAAAAAACAATAAA GAAGG GGGAT CCTTC GGACTAAAGTCCTCA SYO3AOP1_1729 1789602 - 1790054 + | ribosomal protein L13 TERM 1112 1790151 - 1790171 + G 73 -8.3 -3.51329 | TAGCAAGAGTTTGGA TTCTTCCCG GAT CCGGAAGAA TTATAGTTAGAAGTG SYO3AOP1_1730 1790069 - 1790497 + | ribosomal protein S9 TERM 1113 1790616 - 1790643 + G 95 -11.4 -3.91716 | opp_overlap 1790616 1790615 1790613 GTCAAGACAATACAG TGGGAAGGCTTT AAAA GAAGCTTTCCCA TTCTTTAACAAATCA SYO3AOP1_1731 1790506 - 1791528 + | N-acetyl-gamma-glutamyl-phosphate reductase TERM 1114 1791690 - 1791678 - g 77 -4.1 -5.50499 | GTAGATGTAAAAAAA GAGAC GGT ATCTC TCGGTGGTGCATCAA SYO3AOP1_1732 1791525 - 1792478 + | rfaE bifunctional protein TERM 1115 1792704 - 1792671 - f 78 -2.3 -5.85011 | overlap 1792674 1792676 CAAAAATCAAAAAAA TGAGATCCTTCGGAC TAAA GTCCTCAGGATGACA AAGAAAGAGAAAGAG SYO3AOP1_1733 1792936 - 1793178 + | phosphoribosylformylglycinamidine synthase, purS SYO3AOP1_1734 1793182 - 1793862 + | phosphoribosylformylglycinamidine synthase I SYO3AOP1_1735 1793872 - 1794120 + | hypothetical protein TERM 1116 1794176 - 1794206 + G 74 -9.2 -3.07882 | opp_overlap 1794180 1794185, overlap 1794175 1794185 GTTTTAGATGACGGA GAGATAAAGTATCT TGA AGATATTTTAACTC CTTTAATTCTTGTTG SYO3AOP1_1736 1794113 - 1794496 + | hypothetical protein SYO3AOP1_1737 1794499 - 1794954 + | Redoxin domain protein TERM 1117 1794969 - 1794985 + T 90 -12.3 -2.88544 | AACCTGCGACCTTCG GCATCGG AAG CCGATGC TCTATCCAGCTAAGC SYO3AOP1_1738 1795850 - 1795011 - | apurinic endonuclease Apn1 TERM 1118 1795233 - 1795253 + g 76 -5.5 -5.04987 | opp_overlap 1795237 1795250 TTTTGTCTTTTCTAA GAGATTATA ATC TATAAGCTC TTTTTTAAAGCTATT SYO3AOP1_1739 1796482 - 1795844 - | beta-lactamase domain protein TERM 1119 1796098 - 1796079 - G 81 -4.3 -5.40072 | opp_overlap 1796083 1796086 1796087, overlap 1796083 1796085 1796086 TTTTCGTTAAAAAAA CACACAC TGCCCG GTGTATG TCCGGGCGTTTCTAT TERM 1120 1796086 - 1796106 + g 77 -7.5 -4.05033 | opp_overlap 1796079 1796085 1796083 1796086, overlap 1796083 1796087 TAAAAAAACACACAC TGCCCGG TGTATGT CCGGGCG TTTCTATAACCTGAA TERM 1121 1796087 - 1796105 + g 72 -8.8 -3.02698 | opp_overlap 1796079 1796085 1796086 1796083, overlap 1796083 1796086 AAAAAAACACACACT GCCCGG TGTATGT CCGGGC GTTTCTATAACCTGA SYO3AOP1_1740 1797002 - 1796472 - | protein of unknown function DUF29 SYO3AOP1_1741 1797529 - 1797005 - | protein of unknown function DUF29 SYO3AOP1_1742 1798959 - 1797604 - | acetyl-CoA carboxylase, biotin carboxylase SYO3AOP1_1743 1799025 - 1800758 + | type II secretion system protein E SYO3AOP1_1744 1800869 - 1801957 + | twitching motility protein SYO3AOP1_1745 1801957 - 1803177 + | type II secretion system protein SYO3AOP1_1746 1803177 - 1804235 + | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase TERM 1122 1804390 - 1804374 - T 74 -3 -5.45802 | gap 1 TTTTGAAAAGAAAAA CAGCAGA TTCT TC-GCTG ACGCTCAGAATGACA TERM 1123 1804586 - 1804570 - T 100 -9.4 -5.09895 | TATTTATTCAAAAAA GGGGGT AAAAG ACCCCC TAAACTATATAATTA SYO3AOP1_1747 1807844 - 1804599 - | acriflavin resistance protein TERM 1124 1806533 - 1806545 + g 82 -7.7 -4.46212 | CTACCACTGCTGCAT CTTCC ATT GGAAG TTTTCTCATAGAAAA SYO3AOP1_1748 1809014 - 1807848 - | efflux transporter, RND family, MFP subunit SYO3AOP1_1749 1810393 - 1809017 - | outer membrane efflux protein SYO3AOP1_1750 1812178 - 1810778 - | two component, sigma54 specific, transcriptional regulator, Fis family TERM 1125 1811613 - 1811627 + g 70 -7.2 -3.63744 | CTTGCTTCGTGTATT GCTTTT GCA AAAAGC TCTTTTCCAACACCA SYO3AOP1_1751 1814193 - 1812178 - | integral membrane sensor signal transduction histidine kinase TERM 1126 1812872 - 1812890 + g 70 -4.6 -4.80417 | GCAAGTTTTTCTGAC TGGATAAT TTG ATTCTCCA TTTCTTCTTTTTCTG TERM 1127 1813772 - 1813762 - G 72 -2.6 -5.51046 | TAAATATACAAAAAA TAAT AAA ATTA ATGCAATACCATAGC SYO3AOP1_1752 1814292 - 1814543 + | hypothetical protein SYO3AOP1_1753 1815142 - 1816008 + | transposase IS116/IS110/IS902 family protein TERM 1128 1817194 - 1817180 - g 72 -7.2 -3.77832 | overlap 1817188 1817189 CTGTAAATGTAATAA CAAAAG AAC CTTTTG ATGCAGCAAAAGAAA SYO3AOP1_1754 1816195 - 1817367 + | Chorismate synthase TERM 1129 1817946 - 1817930 - g 71 -5.3 -4.5477 | overlap 1817937 GAACATATCAGAAAA TTATAAA GTT TTTATAA ACGTTGCAAATTGGC SYO3AOP1_1755 1817367 - 1818464 + | glycosyl transferase group 1 SYO3AOP1_1756 1818457 - 1819512 + | polysaccharide deacetylase TERM 1130 1820139 - 1820128 - g 80 -5.8 -5.10767 | overlap 1820130 CACCTAATATAAAAA CAGC AGAA GCTG CAAAAGTTATAGAAA TERM 1131 1820140 - 1820130 - g 74 -6.8 -4.17211 | overlap 1820128 CCTAATATAAAAACA GCAG AAG CTGC AAAAGTTATAGAAAA SYO3AOP1_1757 1819509 - 1820822 + | nucleotide sugar dehydrogenase SYO3AOP1_1760 1822100 - 1822483 + | hypothetical protein TERM 1132 1822942 - 1822958 + G 74 -7.3 -4.10164 | GAAGCTTCTGTTGAC CTTGCAA GAC TTGCAGG TTTATATCCTGCTGG SYO3AOP1_1761 1822480 - 1823721 + | 3,4-dihydroxy-2-butanone 4-phosphate synthase SYO3AOP1_1762 1823709 - 1824626 + | hypothetical protein SYO3AOP1_1763 1824616 - 1825032 + | ribosomal-protein-alanine acetyltransferase SYO3AOP1_1764 1825033 - 1825560 + | hypoxanthine phosphoribosyltransferase SYO3AOP1_1765 1825571 - 1826194 + | Carbonate dehydratase SYO3AOP1_1766 1826207 - 1827121 + | molybdenum cofactor biosynthesis protein C SYO3AOP1_1767 1827118 - 1827696 + | hypothetical protein SYO3AOP1_1768 1828123 - 1827719 - | hemerythrin-like metal-binding protein TERM 1133 1828482 - 1828463 - H 78 -2.3 -5.86976 | TGATAAAATAAAAAA TTAAATT TATTTC AATTTAA AGGGGTATGCGTTGA TERM 1134 1828586 - 1828574 - g 74 -7.7 -3.85857 | opp_overlap 1828574 1828585, overlap 1828572 1828581 AATGATGACAAAACA GCCAA AGC TTGGC TTGGATATCCAAGGT TERM 1135 1829214 - 1829197 - g 84 -5.5 -5.47218 | opp_overlap 1829196 TTTTAGTTAAAAAAA CTCCTGT TATA ACGGGAG CTATGCTTAAAGATG SYO3AOP1_1769 1828494 - 1830032 + | protein-export membrane protein SecD SYO3AOP1_1770 1830043 - 1830966 + | protein-export membrane protein SecF SYO3AOP1_1771 1830967 - 1832037 + | histidinol-phosphate aminotransferase SYO3AOP1_1772 1832030 - 1832329 + | DNA polymerase beta domain protein region SYO3AOP1_1773 1832316 - 1832705 + | nucleotidyltransferase substrate binding protein, HI0074 family SYO3AOP1_1774 1833991 - 1832711 - | diguanylate cyclase/phosphodiesterase TERM 1136 1833495 - 1833505 + g 72 -2.4 -5.42259 | opp_overlap 1833495 TTTGCTTTCAATAAT GCAG TAT CAGC TTTTTTTAAGGCTAA TERM 1137 1834477 - 1834462 - g 82 -6.2 -5.09204 | ACAGTTGAAGAAAAA GTAAAG ATGG CTTTAC AGCTTGAAAAACTCG TERM 1138 1834649 - 1834627 - g 75 -4.8 -5.07275 | overlap 1834637 TCAGACATAGAAAAA GCAGGAGA AGCCCTG TCTCCAGC AGAAAACAGAAGAAT TERM 1139 1835481 - 1835470 - g 77 -4.4 -5.15117 | CAAAAGTTTAAAAAA CTTG CAGA CAAG AAAAAAGAAGTATTT SYO3AOP1_1775 1834381 - 1835931 + | 2-isopropylmalate synthase SYO3AOP1_1776 1835932 - 1837236 + | Peptidase M23 SYO3AOP1_1777 1837233 - 1837889 + | transaldolase SYO3AOP1_1778 1837891 - 1838133 + | hypothetical protein