TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.439004 %AT, 2370083 nt, 21607 terms. Intergenic: 0.488593 %AT, H2T: 234596 nt, 1855 terms; T2T: 93711 nt, 1475 terms; H2H: 102888 nt, 1474 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|81230333|ref|NC_007595.1| Synechococcus elongatus PCC 7942 plasmid 1, complete sequence (length 46366) Synpcc7942_B2615 394 - 65 - | hypothetical protein Synpcc7942_B2626 1321 - 497 - | hypothetical protein TERM 1 800 - 790 - G 71 -4.6 -4.59109 | GAGACTTGCCAAAAA CCCG CAT CAGG GCAGGAACCAACGGC Synpcc7942_B2637 1929 - 1318 - | ParA-like protein TERM 2 2255 - 2241 - g 75 -10 -3.86346 | GCATCTTTGCAGAAA CCCAAG GAG CTTGGG GACGTTCCGACTCGA Synpcc7942_B2648 2063 - 2329 + | hypothetical protein Synpcc7942_B2659 2340 - 2723 + | nucleic acid binding protein Synpcc7942_B2654 3070 - 2720 - | hypothetical protein Synpcc7942_B2661 5040 - 3160 - | cysteine desulfurase TERM 3 3250 - 3239 - G 75 -5.8 -4.57341 | opp_overlap 3241 3244, overlap 3243 AAGGTGTTGTAAAAA GCCA GCGA TGGC CGCACCGTTGTTTCC TERM 4 3394 - 3380 - G 83 -7.8 -4.77165 | opp_overlap 3380, overlap 3375 CCCTCGAGAACAAAA GACAGC ACT GCTGCC TTGTGCGGAGCCGTA Synpcc7942_B2662 6195 - 5275 - | major membrane protein I TERM 5 6255 - 6235 - R 71 -11.2 -2.89659 | opp_overlap 6234 6233, overlap 6231 6234 TAGAGTCAGAACAAG GGTGAGAC CCCTT GTCTCACC GGCCAGCGTCGGGGT Synpcc7942_B2663 7249 - 6290 - | putative serine acetyltransferase Synpcc7942_B2664 8235 - 7246 - | cysteine synthase TERM 6 8656 - 8642 - H 71 -2.2 -5.00884 | AGTTTGCTGAAAAAA TTAATT GCT AATCAA CACCTCCACTTGCTC Synpcc7942_B2616 8691 - 9050 + | hypothetical protein TERM 7 9068 - 9055 - T 72 -6.7 -4.15044 | opp_overlap 9054 9055 GTCCCGCCTAAGAAA CAGCT TTTG AGCTG ATTGGTATGAATGTG TERM 8 9232 - 9256 + T 72 -7.2 -4.18702 | gap 1 TCCTCAGTTCACTAT GCGGCTCT-AG TCTT CTGAGAGTCGC TTTATTCGAGATTAT Synpcc7942_B2617 9845 - 9300 - | hypothetical protein Synpcc7942_B2618 9947 - 10381 + | BadM/Rrf2 family transcriptional regulator Synpcc7942_B2619 10600 - 11178 + | carbonic anhydrase, putative TERM 9 12112 - 12091 - g 70 -10.2 -3.25072 | overlap 12086 CCGAGGATAACCCAA CGATCGCT TGGCCG AGCGATCG CCAGCAAGTGAAAGT Synpcc7942_B2620 11202 - 12299 + | putative catalase Synpcc7942_B2621 12400 - 12948 + | hypothetical protein TERM 10 13922 - 13941 + G 100 -12.2 -4.85545 | ATGATTACGCCCGGA CCCGTTGT CATT ACAACGGG TTTTATTGGTTTCCT Synpcc7942_B2622 13100 - 14281 + | chromate transporter Synpcc7942_B2623 14412 - 15401 + | cysteine synthase A Synpcc7942_B2624 15398 - 16924 + | gamma-glutamyltransferase 2 Synpcc7942_B2625 17149 - 17676 + | hypothetical protein TERM 11 18206 - 18229 + G 71 -8.8 -3.78329 | overlap 18207 ATTCCTTCCCATGCC ATCGGGGTTG AACG CAGCCCCGAC TTTGACTTGCTAGGA TERM 12 18207 - 18228 + G 71 -12.3 -2.86676 | overlap 18206 TTCCTTCCCATGCCA TCGGGGTTG AACG CAGCCCCGA CTTTGACTTGCTAGG Synpcc7942_B2627 17687 - 18748 + | hypothetical protein TERM 13 19141 - 19107 - g 72 -10.6 -3.38046 | overlap 19105 GCTGGAGCTGAAACA GGGACCACAGCTGAGC GAA GCCCAGCGGCGATCGC GAATTAGTGACGCCC Synpcc7942_B2628 18745 - 19557 + | sulfonate ABC transporter, ATP-binding protein, putative Synpcc7942_B2629 19583 - 20806 + | sulfonate ABC transporter, periplasmic sulfonate-binding protein, putative Synpcc7942_B2630 20808 - 21608 + | sulfonate ABC transporter, permease protein, putative Synpcc7942_B2631 21934 - 22212 + | hypothetical protein Synpcc7942_B2652 22166 - 22417 + | hypothetical protein Synpcc7942_B2655 23511 - 22675 - | hypothetical protein Synpcc7942_B2632 24160 - 23609 - | hypothetical protein TERM 14 24742 - 24707 - H 84 -7.5 -4.61231 | overlap 24709 TCAGACCCCTAAAAA GTTCGAAGCCCCGAG TTGGCG CTCAGGGCTTCAGGC CGGGTGTGTCCTAGC TERM 15 27405 - 27389 - g 71 -8.7 -3.86346 | opp_overlap 27379 CCACCGGCGCAGAAA TCCTCGG CGT CCGAGAA CTCCTCGCCTTCCTG Synpcc7942_B2633 24871 - 27870 + | hypothetical protein Synpcc7942_B2656 28894 - 27980 - | hypothetical protein TERM 16 28053 - 28066 + g 75 -2.3 -5.10029 | ATTCCAATATTCCAA GCACC ATCT GCTGC TTTTTTAAGATTACT TERM 17 28304 - 28317 + g 70 -5.3 -4.46514 | overlap 28300 GTAGATAATCTGATA CACAA TCTG TTGTG TTTCTTTAGATGACT TERM 18 28986 - 28975 - R 71 -3 -4.78107 | CAGTATTAGTAAAAA CATA TTTC TATG ACTAGTCTGGAGTGA Synpcc7942_B2657 29365 - 29150 - | hypothetical protein TERM 19 29439 - 29463 + r 72 -10.1 -3.37761 | opp_overlap 29437, overlap 29458 GGTTGTGACTACAGC TTTAGGGGATG AGA CATTCCCTAAG TTAGGTTTGTTCAAG Synpcc7942_B2634 31320 - 29941 - | hypothetical protein TERM 20 31742 - 31753 + G 72 -2.2 -4.87592 | overlap 31746 ATCTTTGAACTGTGA GCTT TAAA AGGC TTTTATTATCTGTGG Synpcc7942_B2635 31738 - 32697 + | hypothetical protein TERM 21 32990 - 32945 - f 95 -14.1 -3.35813 | gap 1, opp_overlap 32948 32950 CTTCAGTTCAACGAA TGCCAACACAGCCAGTTCGCAG TAC CCG-GAACTGGCCGCGCTGTCA TTCAGGCTGAATCAA TERM 22 33385 - 33369 - f 95 -13.7 -3.4252 | TTCGATTGAGTAGAA GGTGGCG CAG CGCCACC TGAACAGCCTTGATT Synpcc7942_B2636 33473 - 33760 + | hypothetical protein Synpcc7942_B2658 34359 - 34129 - | hypothetical protein TERM 23 34425 - 34448 + H 85 -3 -5.33405 | CAGCTTGATCCGAGA GTTGTTGACC ACAG GGGCGACGGC TTTTTATTTGCTCAG Synpcc7942_B2638 34543 - 34836 + | hypothetical protein TERM 24 35028 - 35052 + GT 74 -7.9 -4.08216 | gap 1, overlap 35019 CCCAGATTGCGATCC GCCTCGATCG CGATAT CG-TCGAGGC TTTTCGGGCGGGTGG Synpcc7942_B2639 34802 - 35131 + | hypothetical protein Synpcc7942_B2640 36077 - 35646 - | hypothetical protein Synpcc7942_B2641 36267 - 36392 + | hypothetical protein Synpcc7942_B2642 37493 - 36501 - | putative zinc-binding oxidoreductase TERM 25 37265 - 37279 + g 87 -10 -4.62069 | opp_overlap 37274 GACCTGCCAGATCCG TCCCCA AGA TGGGGA TTTTTGGGGTCAACA Synpcc7942_B2643 38428 - 37703 - | ThiJ family protein Synpcc7942_B2644 38521 - 39228 + | response regulator receiver domain-containing protein TERM 26 40176 - 40160 - g 72 -10.1 -3.65351 | TTATTCGTACCCAAA GCGACGA GAT TCGCCGC CTACGAGGACTGCTC Synpcc7942_B2645 39571 - 40194 + | hypothetical protein Synpcc7942_B2646 41786 - 40470 - | two-component sensor histidine kinase TERM 27 40658 - 40680 + gT 89 -13.4 -3.29829 | opp_overlap 40648 AAATTCGGGCTTGAT CCGCTGTGGG AAT CCCACAGCCG TTATCGCGCACTGTC Synpcc7942_B2647 42429 - 41755 - | response regulator receiver domain-containing protein TERM 28 43109 - 43093 - g 71 -4.3 -4.56597 | overlap 43098 GCTGCCTTCCAAAAA CTGAAGC CGC GCACCAG CAAAGGCAAAAAGAA Synpcc7942_B2649 42652 - 43134 + | hypothetical protein TERM 29 43834 - 43853 + GF 70 -10.8 -2.72344 | opp_overlap 43833 CCCTAAAAAAGCCAT CCAGATAG GTCG CTATCTGG TCCTTGACGATGGGA Synpcc7942_B2650 43298 - 43888 + | hypothetical protein Synpcc7942_B2660 43857 - 44252 + | hypothetical protein Synpcc7942_B2651 45741 - 44779 - | integrase/recombinase Synpcc7942_B2653 46181 - 45831 - | transcriptional modulator of MazE/toxin, MazF SEQUENCE gi|81298811|ref|NC_007604.1| Synechococcus elongatus PCC 7942, complete genome (length 2695903) Synpcc7942_0001 65 - 1237 + | DNA polymerase III subunit beta Synpcc7942_0002 1262 - 2134 + | hypothetical protein TERM 1 3692 - 3660 - g 71 -7.6 -4.10161 | opp_overlap 3658 3660 TACGAGGGGGCAAAA GCAGCGGTTGCAGA GGCGG CCCGCAACCTCAGC TGTGTTGGTGCTGAG Synpcc7942_0003 2178 - 4511 + | phosphoribosylformylglycinamidine synthase II TERM 2 4661 - 4680 + G 73 -5.6 -4.64766 | GGAGCGACCTGACCG CCCCGAAG AAGC CTGTGGGG TTTTTGCCCTCTACG TERM 3 5624 - 5609 - g 74 -3.2 -4.86621 | AGGGTTAATCAAAAA CCGC TACGTGGG GCGG ACGTTCATCCAGCCC Synpcc7942_0004 4596 - 6077 + | amidophosphoribosyltransferase Synpcc7942_0005 7706 - 6111 - | hypothetical protein Synpcc7942_0006 8192 - 7779 - | hypothetical protein Synpcc7942_0007 8539 - 8189 - | hypothetical protein TERM 4 8535 - 8554 + g 73 -5 -4.66609 | gap 1 TTGTCGCGCGAAGAG GTCATTGGG CTG CCCGA-GAC TTTTTCGGTGGGGTG Synpcc7942_0008 8859 - 8536 - | hypothetical protein TERM 5 8951 - 8936 - H 71 -3.2 -4.77567 | overlap 8937 ACTGCGATAATAAAA GGCTGT TTCA ACAGCG GAGTGGATTGTCATG TERM 6 9136 - 9120 - g 75 -5.7 -4.58395 | opp_overlap 9135 CCGATCCGCCAAAAA GCACTCG ACT CGGGCGC AGTGGAATCGCTGGT Synpcc7942_0009 8964 - 10166 + | argininosuccinate synthase TERM 7 10195 - 10217 + T 72 -6.3 -4.4267 | gap 1, opp_overlap 10187 AAGAAATTCCTAGGA GGCAAGGAGT GATC GC-CCTTGCC TTTTACGTTTTAAAG Synpcc7942_0010 10878 - 10252 - | hypothetical protein Synpcc7942_0011 11474 - 10998 - | hypothetical protein TERM 8 11592 - 11573 - R 100 -10 -5.14563 | TTGCTCAGCAAAAAA GCCCACTG AAAA CAGTAGGC TCTCACGCGAATCCA rpsF 11964 - 11641 - | 30S ribosomal protein S6 Synpcc7942_0013 12321 - 13028 + | hypothetical protein Synpcc7942_0014 13411 - 13067 - | hypothetical protein Synpcc7942_0015 14248 - 13577 - | putative hydroxylase TERM 9 14416 - 14405 - H 81 -4.4 -5.09426 | CCTAATGCTAAAAAA TCCT AATA AGGA TCATCACTGTGCGCT TERM 10 14730 - 14743 + H 73 -3.7 -4.7497 | overlap 14725 14731 GCCATCACTCCCTAC CGCCG CGAT CGGCA TTTTTGCTACATCAC Synpcc7942_0016 15020 - 15604 + | hypothetical protein Synpcc7942_0017 16193 - 15630 - | keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase glyS 18392 - 16206 - | glycyl-tRNA synthetase subunit beta Synpcc7942_0019 18615 - 20489 + | sulfite reductase subunit beta Synpcc7942_0020 20490 - 21092 + | hypothetical protein Synpcc7942_0021 21874 - 21134 - | cobalt-precorrin-6x reductase Synpcc7942_0022 23049 - 21880 - | hypothetical protein Synpcc7942_0023 24121 - 23057 - | calcium/proton exchanger Synpcc7942_0024 25371 - 24181 - | hypothetical protein Synpcc7942_0025 25416 - 27122 + | hypothetical protein Synpcc7942_0026 28059 - 27082 - | hypothetical protein TERM 11 27290 - 27267 - G 74 -11.8 -3.16683 | gap 1 AGGCGACTTGAGGAA TGGTGCGATCG TAG CGATCGC-CCA GTGCTGCTAGCTGAT Synpcc7942_0027 28184 - 29350 + | 8-amino-7-oxononanoate synthase TERM 12 29749 - 29772 + G 72 -9.6 -3.64283 | opp_overlap 29733 29732 29746, overlap 29747 GCGCCGGAATTACCG GCGATCGC CCCCGATC GCGATCGC TTGTTGGCAGATTTG Synpcc7942_0028 29347 - 30015 + | hypothetical protein Synpcc7942_0029 30012 - 30833 + | hypothetical protein Synpcc7942_0030 30839 - 31471 + | dethiobiotin synthase TERM 13 32106 - 32126 + G 79 -7.5 -4.57073 | overlap 32107 CAAGGTGCGGGTGGA ATGCGGATG GCG CGTCCGCAG TTTTTGCAACAACTG TERM 14 32107 - 32125 + G 74 -11 -3.33922 | overlap 32106 AAGGTGCGGGTGGAA TGCGGATG GCG CGTCCGCA GTTTTTGCAACAACT Synpcc7942_0031 31464 - 32738 + | aminotransferase Synpcc7942_0032 33202 - 32849 - | hypothetical protein Synpcc7942_0033 33506 - 33174 - | hypothetical protein Synpcc7942_0034 33685 - 33798 + | N-acetylornithine aminotransferase Synpcc7942_0035 35115 - 34357 - | hypothetical protein TERM 15 35207 - 35218 + H 75 -4.4 -4.74285 | opp_overlap 35207 TCGCGTAGTGATTAA CAGT GATG ACTG TTTTCTCTTCTCAAT TERM 16 35321 - 35335 + H 100 -10 -4.88736 | TCTGGCAATTTTCCT CACTGC CCA GCAGTG TTTTTATGCCTCCTC Synpcc7942_0036 35341 - 36126 + | hypothetical protein Synpcc7942_0037 36326 - 36123 - | hypothetical protein Synpcc7942_0038 36479 - 36955 + | mutator MutT protein Synpcc7942_0039 37130 - 38545 + | 6-phosphogluconate dehydrogenase Synpcc7942_0040 38630 - 39007 + | dihydroneopterin aldolase dihydroneopterin aldolase TERM 17 39184 - 39210 + F 79 -12.4 -2.9834 | opp_overlap 39184 39189, overlap 39180 CACTTTGGAACTTAA GTCAATCCGAAT TGA ATTCGGGTTGGC TCTGATTATCGTGAT Synpcc7942_0041 39441 - 40745 + | transport protein TERM 18 40825 - 40798 - T 100 -12 -4.93696 | CTCAAACATGAAAAA GCCCGTCGTTCT CGTC AGAACAGCGGGC TAGCGGAGAGGTCAG rpmB 41091 - 40855 - | 50S ribosomal protein L28 Synpcc7942_0043 41496 - 41131 - | hypothetical protein TERM 19 43295 - 43317 + GH 74 -6.2 -4.46212 | overlap 43296 43298 GAGTGGTCGTCAGGC GTAGCCGCAG GAA CTGTGGCTGA TTTTGTGCTGCAACA TERM 20 43296 - 43316 + GH 70 -9.7 -3.27406 | overlap 43295 43298 AGTGGTCGTCAGGCG TAGCCGCAG GAA CTGTGGCTG ATTTTGTGCTGCAAC TERM 21 43298 - 43314 + GH 70 -10.1 -3.20028 | overlap 43296 43295 TGGTCGTCAGGCGTA GCCGCAG GAA CTGTGGC TGATTTTGTGCTGCA Synpcc7942_0044 41495 - 43477 + | hypothetical protein Synpcc7942_0045 43572 - 44927 + | TPR repeat-containing protein TERM 22 45903 - 45943 + G 72 -4 -4.7173 | ATAAGGGTTATGGCG TTCCAGACCTGCGG CAGTATTTGGAGA CTGCGGGGCTGGAA TTTTTGGGTATGGTG Synpcc7942_0046 45164 - 46507 + | methylase involved in ubiquinone/menaquinone biosynthesis-like Synpcc7942_0047 46515 - 48881 + | TPR repeat-containing protein TERM 23 48872 - 48914 + T 100 -18.8 -3.1332 | opp_overlap 48885, overlap 48874 48885 TGCCCATCTGCTTTC AAGTTTTTAGGAATTTGGGA ATA TCCCGAATTCCTAAAAACTG TTAAATACTCTGTTA TERM 24 48874 - 48912 + T 100 -21.4 -3.12036 | opp_overlap 48885, overlap 48872 48885 CCCATCTGCTTTCAA GTTTTTAGGAATTTGGGA ATA TCCCGAATTCCTAAAAAC TGTTAAATACTCTGT Synpcc7942_0048 49361 - 48927 - | pilin polypeptide PilA-like TERM 25 49470 - 49523 + r 95 -15.8 -2.57335 | gap 1, opp_overlap 49475 49479, overlap 49475 49479 GATAATAACTTCATG ACTAATCAATAGATCTTTTCACAGG CTTTA CCT-TGAAAAGGTCTATTGATTAGA TAAATTCGATATTAT TERM 26 49475 - 49518 + r 87 -14.3 -3.10112 | gap 1, opp_overlap 49475 49479, overlap 49470 49479 TAACTTCATGACTAA TCAATAGATCTTTTCACAGG CTTTA CCT-TGAAAAGGTCTATTGA TTAGATAAATTCGAT TERM 27 49518 - 49475 - R 81 -12.8 -3.22223 | gap 1, opp_overlap 49475 49470 49479, overlap 49479 TAACTTCATGACTAA TCAATAGATCTTTTCACAGGC TTT ACCT-TGAAAAGGTCTATTGA TTAGATAAATTCGAT Synpcc7942_0049 49984 - 49550 - | pilin polypeptide PilA-like TERM 28 50145 - 50118 - g 91 -9.9 -4.72272 | TCTCCTGATCAAAAA GCAGTCCTGCA AATCAG TGCAGCACTGC AACAAGTCACTCAGG TERM 29 51268 - 51236 - g 86 -10.7 -4.26938 | opp_overlap 51245, overlap 51233 TTTAGAAAACAATAA CTCAGATGACTTACA GCT TGAAAGTAATCTGAG ACTAACCAAAATTAA Synpcc7942_0050 50070 - 52616 + | hypothetical protein Synpcc7942_0051 54507 - 52606 - | TPR repeat-containing protein Synpcc7942_0052 55030 - 54512 - | hypothetical protein Synpcc7942_0053 56352 - 55204 - | hypothetical protein Synpcc7942_0054 57190 - 56423 - | hypothetical protein Synpcc7942_0055 57906 - 57223 - | hypothetical protein Synpcc7942_0056 59068 - 57941 - | perosamine synthetase Synpcc7942_0057 60304 - 59072 - | putative C-3 methyl transferase Synpcc7942_0058 60846 - 60301 - | dTDP-4-dehydrorhamnose 3,5-epimerase Synpcc7942_0059 61112 - 60867 - | hypothetical protein Synpcc7942_0060 61369 - 61091 - | hypothetical protein Synpcc7942_0061 62472 - 61366 - | CDP-glucose 4,6-dehydratase Synpcc7942_0062 63242 - 62469 - | glucose-1-phosphate cytidylyltransferase Synpcc7942_0063 64706 - 64266 - | dual specificity protein phosphatase Synpcc7942_0064 64870 - 64703 - | hypothetical protein TERM 30 64929 - 64958 + r 70 -6.5 -4.25681 | opp_overlap 64931, overlap 64931 ATCGCGCCATAGCAA AAGTGAGTAGAAA TCAC TTCCTACTCACTC TTTGTTGAGTTCAAT TERM 31 64956 - 64931 - R 95 -11.3 -4.34402 | opp_overlap 64931 64929 CGCGCCATAGCAAAA GTGAGTAGAAA TCAC TTCCTACTCAC TCTTTGTTGAGTTCA TERM 32 64931 - 64956 + r 76 -9.1 -3.72494 | opp_overlap 64931, overlap 64929 CGCGCCATAGCAAAA GTGAGTAGAAA TCAC TTCCTACTCAC TCTTTGTTGAGTTCA infC 65541 - 64987 - | translation initiation factor IF-3 TERM 33 65276 - 65292 + g 100 -10.1 -5.1356 | TTATGCTGCTTCTTG CGCGCTT CTC GAGCGCG TTTTTCTTGCTCAAA TERM 34 65627 - 65603 - R 70 -4.9 -4.52669 | overlap 65576 AACAAGGTAAAGAAA CGCTCTCCAAT TCT ACCGAGGAGCG GAAGGAACGTCAGAA Synpcc7942_0066 67172 - 65658 - | hypothetical protein TERM 35 67071 - 67058 - G 76 -3.7 -4.98255 | overlap 67031 67059 67060 TGCCAAGCAGAAAAA GGGCG ATCG CGCCG GGCTGCACGCCGCGG Synpcc7942_0067 67986 - 67177 - | ABC transporter permease Synpcc7942_0068 68980 - 67991 - | ATPase Synpcc7942_0069 69079 - 69375 + | hypothetical protein Synpcc7942_0070 69938 - 69378 - | hypothetical protein Synpcc7942_0071 71139 - 69940 - | pleiotropic regulatory protein-like Synpcc7942_0072 71960 - 71307 - | hypothetical protein Synpcc7942_0073 73196 - 72000 - | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase Synpcc7942_0074 73659 - 73306 - | hypothetical protein Synpcc7942_0075 73775 - 75088 + | aminopeptidase P Synpcc7942_0076 75091 - 75852 + | extracellular solute-binding protein Synpcc7942_0077 75928 - 76617 + | XRE family transcriptional regulator Synpcc7942_0078 77063 - 76614 - | hypothetical protein Synpcc7942_0079 77584 - 77138 - | hypothetical protein Synpcc7942_0080 78871 - 77648 - | ABC transporter permease TERM 36 78802 - 78828 + g 75 -8.7 -4.08692 | gap 1 CCAGCATGGTCAGAG CGCTGCGCAGCC GATT GGCT-CGCAGAG TTTTGACCGCCATTG Synpcc7942_0081 79196 - 78987 - | RNA-binding S4 Synpcc7942_0082 79265 - 81013 + | ATPase Synpcc7942_0083 81023 - 81220 + | hypothetical protein Synpcc7942_0084 81217 - 81918 + | hypothetical protein Synpcc7942_0085 82865 - 82179 - | HAD family hydrolase Synpcc7942_0086 84955 - 82871 - | isoamylase Synpcc7942_0087 86475 - 84964 - | hypothetical protein Synpcc7942_0088 86547 - 87269 + | hypothetical protein Synpcc7942_0089 88615 - 87881 - | carboxymethylenebutenolidase Synpcc7942_0090 88735 - 89718 + | GntR family transcriptional regulator Synpcc7942_0091 90326 - 89715 - | hypothetical protein Synpcc7942_0092 90930 - 90583 - | hypothetical protein Synpcc7942_0093 91029 - 91676 + | thymidylate kinase Synpcc7942_0094 91676 - 92611 + | DNA polymerase III subunit delta' Synpcc7942_0095 93339 - 92590 - | two component transcriptional regulator TERM 37 93631 - 93642 + r 70 -5.8 -4.20918 | CAAATTACTCAATCC CTGC TTCT GCAG TTTCTTAGGATTGAA Synpcc7942_0096 94285 - 93764 - | hypothetical protein TERM 38 94107 - 94095 - G 76 -6.9 -4.56775 | opp_overlap 94105, overlap 94096 94097 AGGGTGCCCCAAAAA CCGCC GCT GACGG CACCAGTTGCCGTTA cobN 98166 - 94375 - | cobaltochelatase TERM 39 97126 - 97140 + g 71 -11.4 -3.11732 | overlap 97118 AACATCGGTTTCTAA GGCTGG ATT CCAGCC TTGAGTCGCTTTGAA TERM 40 98043 - 98030 - G 84 -5.2 -5.02074 | overlap 98018 TCAGCGGGCAAAAAA GCCC GAGCTT GGGC GATCGCGCTGACATC Synpcc7942_0098 100086 - 98302 - | pyruvate kinase TERM 41 100346 - 100330 - g 75 -2.2 -5.1417 | CGAGAAAATTAAAAA GGTGAT TCGCG ATCGCC ATGGCCAGATCGATG Synpcc7942_0099 100202 - 100531 + | hypothetical protein Synpcc7942_0100 101082 - 100528 - | hypothetical protein Synpcc7942_0101 101259 - 102593 + | type 2 NADH dehydrogenase Synpcc7942_0102 102674 - 103237 + | hypothetical protein Synpcc7942_0103 103645 - 103268 - | ankyrin Synpcc7942_0104 104408 - 103632 - | hypothetical protein nadE 106377 - 104653 - | NAD synthetase nadD 106952 - 106374 - | nicotinic acid mononucleotide adenylyltransferase Synpcc7942_0107 108383 - 106965 - | small GTP-binding protein domain-containing protein Synpcc7942_0108 108556 - 108816 + | sulfiredoxin TERM 42 108916 - 108904 - g 81 -4.7 -5.15969 | overlap 108905 108906 TCGGAAGGTAAAAAA GCGGC CAC GCTGC CCGTGGACATTGGCA Synpcc7942_0109 108877 - 109383 + | DNA-binding ferritin-like protein (oxidative damage protectant)-like Synpcc7942_0110 109390 - 109947 + | XRE family transcriptional regulator TERM 43 110225 - 110235 + G 82 -2.4 -5.4477 | overlap 110189 GGGCGCGATCGCCCG CAGG ATT CCCG TTTTTTTCGCAGTTT Synpcc7942_0111 110012 - 111607 + | DnaK protein-like Synpcc7942_0112 111686 - 113140 + | deoxyribodipyrimidine photo-lyase type I petL 113196 - 113288 + | cytochrome b6-f complex subunit PetL Synpcc7942_0115 114146 - 113631 - | hypothetical protein Synpcc7942_0114 113327 - 113698 + | hypothetical protein Synpcc7942_0116 114299 - 115273 + | fructokinase Synpcc7942_0117 115391 - 116722 + | thiol methyltransferase 1-like gatB 116943 - 118427 + | aspartyl/glutamyl-tRNA amidotransferase subunit B TERM 44 118520 - 118577 + T 100 -17.1 -3.73647 | gap 1, opp_overlap 118534 118535 GTTGTCTGCGATCGC CGCTTTTCGTCAAACCTGTCGCGATCGT CGG GCGATCGCGACAGCTGTG-CGGGTAGCG TTATTCATCGGTACG TERM 45 118564 - 118534 - T 100 -15.5 -3.53012 | opp_overlap 118520, overlap 118535 CCGCTTTTCGTCAAA CCTGTCGCGATCG TCGGG CGATCGCGACAGC TGTGCGGGTAGCGTT TERM 46 118563 - 118535 - T 100 -19 -2.71712 | opp_overlap 118520, overlap 118534 CGCTTTTCGTCAAAC CTGTCGCGATCG TCGGG CGATCGCGACAG CTGTGCGGGTAGCGT Synpcc7942_0119 119292 - 118735 - | hypothetical protein Synpcc7942_0120 119993 - 119508 - | cytosine/adenosine deaminase-like Synpcc7942_0121 121239 - 120013 - | hypothetical protein TERM 47 120520 - 120500 - G 70 -5.4 -4.42788 | gap 1 GCCAACGCCACAAAA GCGCGGTCG GGAT CAACCG-GC AGTGCATCAATGATC TERM 48 121068 - 121055 - G 72 -5.9 -4.42386 | overlap 121057 TCTTGATTGAGAAAA CCGCC GGAG GGCAG CACCTGTCGAGGGCC Synpcc7942_0122 123408 - 121831 - | EAL Synpcc7942_0123 123897 - 123808 - | hypothetical protein Synpcc7942_0124 124669 - 124070 - | thiol methyltransferase 1-like hisB 125367 - 124738 - | imidazoleglycerol-phosphate dehydratase Synpcc7942_0126 126158 - 125382 - | enoyl-(acyl carrier protein) reductase TERM 49 126247 - 126234 - H 77 -6.7 -4.56597 | overlap 126235 GCTGTCGCCGAAAAA GTAGC AGTT GCTAC AAGCAGCAGCTAGGC Synpcc7942_0127 126390 - 127058 + | Crp/FNR family transcriptional regulator TERM 50 128027 - 128041 + G 83 -11.4 -3.96892 | opp_overlap 128025 TTGCGGGAACAACTG CGGACG GGC CGTCCG TTTGTGGTGCGGATT Synpcc7942_0128 127151 - 128449 + | hypothetical protein Synpcc7942_0130 129409 - 128822 - | hypothetical protein Synpcc7942_0129 128446 - 128877 + | resolvase, RNase H-like fold TERM 51 129598 - 129608 + Tr 70 -4 -4.71223 | opp_overlap 129592, overlap 129592 CTGGAACAAGGAGCT TAAG CCC CTTA TTTTCTATCTTGTAA Synpcc7942_0131 132495 - 129670 - | cyclic nucleotide-binding domain-containing protein TERM 52 130481 - 130463 - G 75 -11 -3.53224 | GACGCCTGTTGTAAA CGTTGAGC TAA GCCCAACG CAGCCGGATCGGATT TERM 53 130648 - 130664 + g 81 -10.9 -4.12188 | TTGAGATAACTGTGC GAGCAGA AAC TCTGCTC TTTTAACACTGCTGG TERM 54 131835 - 131850 + g 71 -9 -3.77196 | ACTGTGTAATCAGCT GCTCAC TGGT GTGAGC TTTGCTGCCTAATAA TERM 55 132042 - 132024 - G 79 -2.3 -5.2853 | overlap 132025 132037 CATTGAAAAACAAAA TTCGGCC ACATA AGCCGAT AAATAACCAGCTGAA Synpcc7942_0132 133770 - 132721 - | hypothetical protein Synpcc7942_0133 133915 - 134754 + | hypothetical protein Synpcc7942_0134 134745 - 136052 + | hypothetical protein Synpcc7942_0135 136651 - 136016 - | methylase involved in ubiquinone/menaquinone biosynthesis-like Synpcc7942_0136 138013 - 136706 - | phage integrase hemH 138115 - 139278 + | ferrochelatase Synpcc7942_0138 139416 - 140018 + | membrane proteins, metalloendopeptidase-like Synpcc7942_0139 140268 - 142106 + | acetolactate synthase 3 catalytic subunit TERM 56 142090 - 142112 + T 75 -5.5 -4.59511 | overlap 142109 AGTTCTGTCCGGACT GCGGCGCTA AGCTC TAGAGCTGC TTTTTAGGCAGTCTT TERM 57 142133 - 142159 + T 100 -13.1 -4.41494 | opp_overlap 142135 AGGCAGTCTTCAGGA GACCCACCGAA CCAGT TTTGGTGGGTC TTTTGCTTGGGGATG Synpcc7942_0140 142631 - 142233 - | hypothetical protein secF 143562 - 142618 - | preprotein translocase subunit SecF secD 144966 - 143572 - | preprotein translocase subunit SecD TERM 58 144943 - 144957 + g 71 -7.8 -4.16681 | opp_overlap 144943 144942 144945 GGCCAGAATTAAGAT CAGCGG ACT CTGCTG TTTTCCCATGATGTT Synpcc7942_0143 145983 - 145003 - | pyruvate/2-oxoglutarate dehydrogenase complex dehydrogenase (E1) component Synpcc7942_0144 146268 - 146720 + | hypothetical protein Synpcc7942_0145 147040 - 146717 - | hypothetical protein Synpcc7942_0146 147160 - 147855 + | hypothetical protein Synpcc7942_0147 148491 - 148159 - | hypothetical protein TERM 59 150030 - 150018 - g 71 -7.7 -4.15788 | AAGCTTCGGAAGAAA CGTTG CGG CAACG ACTGCAAGCCCGCCA Synpcc7942_0148 148646 - 150190 + | hypothetical protein Synpcc7942_0149 150744 - 150187 - | methylated-DNA--protein-cysteine methyltransferase Synpcc7942_0150 151918 - 150752 - | dolichyl-phosphate beta-D-mannosyltransferase TERM 60 154324 - 154342 + G 77 -11 -3.54459 | AAGCCGATCGCCAGT TCCGAGCT AGT GGCTCGGA TTTACAACCGCTTGG Synpcc7942_0151 152527 - 154917 + | response regulator receiver modulated diguanylate cyclase mraY 156011 - 154914 - | phospho-N-acetylmuramoyl-pentapeptide-transferase TERM 61 155734 - 155747 + g 75 -5.9 -4.59773 | AAAATGCCTCCCATG GTCGG GGTT CCGGC TTTTTGCAAATGGGA TERM 62 155885 - 155859 - G 78 -13.1 -3.37537 | overlap 155854 GAGGCTAAAACCCAA CCCCAAAGCCA GCAAT TGACTTTGGGG GCTGAACAGCCCAAT Synpcc7942_0153 156307 - 156026 - | hypothetical protein Synpcc7942_0154 156340 - 156957 + | hypothetical protein TERM 63 157172 - 157144 - g 89 -17.5 -3.16564 | TCGCGATCGCAGCAA GCCCCCAACCCCA GAC TGAGGTTGAGGGC AAATCGCCCTAGGGT Synpcc7942_0155 156954 - 157184 + | hypothetical protein Synpcc7942_0156 158841 - 157210 - | phosphoglucomutase Synpcc7942_0157 159560 - 159042 - | hypothetical protein TERM 64 159964 - 159923 - R 72 -5 -4.72272 | gap 1 CGTGGGCAGCAAAAA GCCCGCTCGCCTCTACCTC GCTGG GAGGGACT-GCGATCGGGC TGGGATGACTACAGG Synpcc7942_0158 161171 - 159996 - | hypothetical protein Synpcc7942_0159 161632 - 161198 - | Mov34/MPN/PAD-1 TERM 65 161866 - 161850 - g 72 -2.2 -5.00616 | overlap 161852 TGGTCGGGCAAAAAA TTGCGA TTACC TCGCCA GTGGCGCAAACCACC TERM 66 162402 - 162372 - g 78 -11.8 -3.5394 | opp_overlap 162371, overlap 162373 AAATTTTGCTGCAAA CCCGCGAGGAAGTG CCG CACTCCGTCGCGGT GGTGATTGAACGGGT TERM 67 162401 - 162373 - g 80 -15.3 -2.72043 | opp_overlap 162371, overlap 162372 AATTTTGCTGCAAAC CCGCGAGGAAGTG CCG CACTCCGTCGCGG TGGTGATTGAACGGG era 161726 - 162661 + | GTP-binding protein Era Synpcc7942_0161 162764 - 163306 + | hypothetical protein Synpcc7942_0162 163405 - 163755 + | hypothetical protein Synpcc7942_0163 163761 - 164510 + | hypothetical protein Synpcc7942_0164 164548 - 164967 + | Iojap-related protein TERM 68 165045 - 165057 + G 77 -3.3 -5.09895 | overlap 165046 TGAATATCAAACTCT GCAGG ACT CCTGG TTTTTTAGCTGGGTC TERM 69 165394 - 165425 + G 72 -10.3 -3.54051 | gap 1 TATGAGGTTCAGCCG CTGCTCGATCGACT CAGAC AGTCGATTG-GCAG TTGTGTGGCGTTTAT Synpcc7942_0165 164986 - 165486 + | hypothetical protein TERM 70 165537 - 165498 - g 71 -8.4 -3.91911 | overlap 165508 GTGAGTTTAACCAAA CGGGTACAAACCGCCCCG ATCG CGGTGCGGCTGCTACGCG AAGGCATTTTGGAAT TERM 71 165527 - 165508 - g 79 -10.6 -3.91072 | overlap 165498 CCAAACGGGTACAAA CCGCCCCG ATCG CGGTGCGG CTGCTACGCGAAGGC Synpcc7942_0166 165483 - 166436 + | hypothetical protein TERM 72 166635 - 166615 - T 86 -11.1 -3.95584 | opp_overlap 166615 CCGCCACCAACTAAA GAGTCGCTC AGA GAGCGGCTC TTTTTTGTTGCCTTA TERM 73 166615 - 166635 + T 100 -13.3 -5.5074 | opp_overlap 166615 CCGCCACCAACTAAA GAGTCGCTC AGA GAGCGGCTC TTTTTTGTTGCCTTA Synpcc7942_0167 166925 - 166695 - | hypothetical protein Synpcc7942_0168 167065 - 167748 + | hypothetical protein Synpcc7942_0169 168176 - 170347 + | glutamate-ammonia ligase, glutamine synthetase type III TERM 74 170390 - 170417 + F 100 -10.6 -4.63048 | opp_overlap 170390 TGTGAGCCGAATTCA GTGTTGGGGGTT GATT GGCCTCCAACAC TTTCTTGTTTGTAGA Synpcc7942_0170 170498 - 170752 + | hypothetical protein TERM 75 170843 - 170858 + G 93 -7.5 -5.45652 | opp_overlap 170843 GTGACAGGAGACCAA GCCCC CTCGTT GGGGC TTTTTTATTGAGGGT TERM 76 171019 - 171033 + G 71 -11.4 -3.14211 | opp_overlap 171017 171028 171029 ACTGGCTGTAACATT CTCGGC AAA GCCGAG TTCCTCAACCCGGGT Synpcc7942_0171 170797 - 171915 + | cysteine synthase A Synpcc7942_0172 171912 - 172205 + | hypothetical protein Synpcc7942_0173 173071 - 172202 - | 3'-phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase-like TERM 77 173513 - 173524 + G 75 -5.8 -4.58395 | TCGAGTGATCGCTTT GCCT TTGA AGGC TTTTTGCCGGCTAAA Synpcc7942_0174 173111 - 173989 + | hypothetical protein Synpcc7942_0175 173986 - 174198 + | hypothetical protein Synpcc7942_0176 174311 - 174712 + | hypothetical protein Synpcc7942_0177 175497 - 174709 - | ABC-type uncharacterized transport system permease component-like TERM 78 174935 - 174912 - G 75 -6 -4.58395 | gap 1 TCGACTCTGGAAAAA CGGAGAGTGGC GCG ACCA-TCCCCG ACAGAAAGAGGTAAG Synpcc7942_0178 176471 - 175494 - | ATPase Synpcc7942_0179 176742 - 177095 + | secretion chaperone CsaA Synpcc7942_0180 178422 - 177550 - | hypothetical protein TERM 79 178256 - 178242 - G 71 -7.2 -4.16814 | opp_overlap 178241 TTAGCACAGAAATAA CTAGTA ATT TACTAG ATGGCTTGCCTGAAA Synpcc7942_0181 179792 - 178419 - | ATPase TERM 80 178670 - 178682 + g 77 -7.7 -4.46514 | opp_overlap 178669 178670 CGCCAGATGATAAAT CTGTC GGT GACAG TTTATTTGAATCAGT TERM 81 179536 - 179549 + g 75 -2.4 -5.10033 | ATATCAACTCTTCCT GACT CGTGAA AGTC TTTTATTTCTCTTGC Synpcc7942_0182 180881 - 180156 - | hypothetical protein TERM 82 181118 - 181135 + G 82 -6.3 -4.88918 | opp_overlap 181118, overlap 181113 GATCGCTGGCTGAAA CTGCGAT TTGG ATTGCAG TTTTATTTAACCTGA Synpcc7942_0183 181078 - 181467 + | hypothetical protein Synpcc7942_0184 181464 - 182555 + | putative phosphate permease Synpcc7942_0185 182620 - 184146 + | gamma-glutamyltransferase Synpcc7942_0186 184160 - 184411 + | DNA polymerase Synpcc7942_0187 185461 - 184418 - | hypothetical protein Synpcc7942_0188 185682 - 187418 + | diguanylate cyclase/phosphodiesterase TERM 83 187503 - 187472 - T 91 -9.5 -4.59773 | opp_overlap 187475, overlap 187475 CGTTATCCCTAAAAA CAACGCTCCCTAG GACTGA CTAGAGAGCGTTC ATTCAACAACAACTT TERM 84 187500 - 187475 - T 93 -11.2 -4.41633 | opp_overlap 187475, overlap 187472 TATCCCTAAAAACAA CGCTCCCTAG GACTGA CTAGAGAGCG TTCATTCAACAACAA guaA 189258 - 187531 - | bifunctional GMP synthase/glutamine amidotransferase protein TERM 85 188175 - 188205 + g 84 -5.4 -5.07486 | opp_overlap 188175 188177 ATTCTTCTTCAAAAA CGCGAATGAATTCG TGG CCAATCCGTTTGCG TTTTTCTTCGGGATC cbiD 190397 - 189273 - | cobalt-precorrin-6A synthase Synpcc7942_0191 190472 - 191620 + | Serine--glyoxylate transaminase TERM 86 191656 - 191690 + T 76 -12.3 -2.53905 | opp_overlap 191661, overlap 191661 GATCGCACAGCTATC AAAAAGGGCTTCATG ATGTG CATGAGGCCCTTTTG CTTGATGAGTTGTGA TERM 87 191661 - 191685 + T 100 -12.2 -4.45945 | opp_overlap 191661, overlap 191656 CACAGCTATCAAAAA GGGCTTCATG ATGTG CATGAGGCCC TTTTGCTTGATGAGT TERM 88 191685 - 191661 - T 100 -10 -4.76041 | opp_overlap 191661 191656 CACAGCTATCAAAAA GGGCTTCATG ATGTG CATGAGGCCC TTTTGCTTGATGAGT Synpcc7942_0192 192186 - 191710 - | hypothetical protein Synpcc7942_0193 192471 - 192247 - | hypothetical protein Synpcc7942_0194 195516 - 192655 - | DNA polymerase I Synpcc7942_0195 195630 - 196058 + | hypothetical protein Synpcc7942_0196 197575 - 196094 - | Beta-carotene 15,15'-dioxygenase Synpcc7942_0197 198933 - 197572 - | folate/biopterin transporter TERM 89 198237 - 198205 - G 72 -6.2 -4.43283 | gap 1, overlap 198207 CCAGAGAAAGAGAAA CAGCGTCGGCATCCA AATT TGG-CGCTGACGCAG GGCTTGGCCAATTTG TERM 90 198799 - 198787 - G 86 -5.5 -5.24129 | GTCTTTGAGAAAAAA GCTGA CAG CCAGC CGAGAGAGTCCGAGG Synpcc7942_0198 200429 - 198993 - | type 2 NADH dehydrogenase Synpcc7942_0199 201352 - 200426 - | hypothetical protein TERM 91 200986 - 200971 - G 81 -4.6 -5.1615 | overlap 200973 TGAACAGGGAAAAAA CACCGC CGAC GCCGTG CAGATACATGGTCTC Synpcc7942_0200 201888 - 201352 - | hypothetical protein TERM 92 201492 - 201478 - G 78 -5.7 -4.72272 | GGTGCCCAGTAAAAA CTGGT AGCAG ACCAG CACGACCACGATCGC TERM 93 201733 - 201749 + g 71 -9.4 -3.73107 | CACCAGGTTCCACCA GCCTGC ATTCA GCAGGC TTTGGCGTTTGCTGA Synpcc7942_0201 202641 - 201889 - | hypothetical protein Synpcc7942_0202 204089 - 202638 - | Cbb3-type cytochrome oxidase subunit 1-like Synpcc7942_0203 205589 - 204483 - | 5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase Synpcc7942_0204 206046 - 205582 - | hypothetical protein TERM 94 206560 - 206571 + G 86 -5.8 -5.03314 | TTACCTTGATCTCTT TCCC CAGT GGGA TTTTTTGGAAGTGCC Synpcc7942_0205 206198 - 207214 + | bifunctional nicotinamide mononucleotide adenylyltransferase/ADP-ribose pyrophosphatase Synpcc7942_0206 207362 - 208750 + | putative nicotinate phosphoribosyltransferase Synpcc7942_0207 208813 - 208983 + | hypothetical protein TERM 95 211423 - 211403 - g 84 -5.3 -5.03314 | TTTACCGCGAAAAAA GCTGTCCGC TCA ACGAACTGC TACCGGCGCTGCTAG Synpcc7942_0208 209056 - 211827 + | TPR repeat-containing protein Synpcc7942_0209 212450 - 211824 - | Maf-like protein Synpcc7942_0210 212496 - 212897 + | hypothetical protein Synpcc7942_0211 212909 - 214384 + | cobyric acid synthase Synpcc7942_0212 214471 - 215559 + | chorismate synthase Synpcc7942_0213 216188 - 215643 - | hypothetical protein TERM 96 216550 - 216571 + G 88 -4.3 -5.48213 | ATGGTTACCGAAGCT GCTGCCC CATTTGCT GGGCCGC TTTTTGTTTTGGGTC Synpcc7942_0214 216509 - 217432 + | hypothetical protein Synpcc7942_0215 217813 - 217424 - | hypothetical protein Synpcc7942_0216 218964 - 217948 - | putative zinc-binding oxidoreductase Synpcc7942_0217 219113 - 219871 + | phosphatase-like Synpcc7942_0218 220191 - 220024 - | hypothetical protein Synpcc7942_0219 220636 - 220316 - | hypothetical protein Synpcc7942_0220 221397 - 220639 - | cell division inhibitor MinD glk 221498 - 222535 + | glucokinase Synpcc7942_0222 222532 - 223398 + | hypothetical protein Synpcc7942_0223 223805 - 223395 - | hypothetical protein psbN 223961 - 223821 - | photosystem II reaction center protein N Synpcc7942_0225 224060 - 224263 + | photosystem II reaction center protein H TERM 97 224291 - 224312 + F 100 -14.4 -4.12532 | CGCCTTGATCTGCTG CGCCCCCG CTCTGT CGGGGGCG TTTGTGTCTGAAGCC Synpcc7942_0226 224357 - 224632 + | Sec-independent protein translocase TatA Synpcc7942_0227 224629 - 225255 + | peptidyl-tRNA hydrolase Synpcc7942_0228 225284 - 225544 + | hypothetical protein Synpcc7942_0229 225658 - 226221 + | hypothetical protein Synpcc7942_0230 227309 - 226263 - | hypothetical protein TERM 98 226359 - 226333 - G 79 -8 -4.46212 | CCGGTGAGGACAAAA GCGATCGCCA AGAGCGG CAGCGATCGC GTTAGACCCAGCACC Synpcc7942_0231 227931 - 227407 - | putative acetyltransferase Synpcc7942_0232 229285 - 227939 - | 3-phosphoshikimate 1-carboxyvinyltransferase TERM 99 228525 - 228513 - G 74 -3.3 -4.90266 | opp_overlap 228513, overlap 228514 228516 228517 GCGACCAACCAAAAA GCAGC GGA GCTGA TATCTCCGGGCACGA TERM 100 229309 - 229321 + r 76 -9.1 -3.75153 | CAAGACGAGTGCCTA GGCGA TTA TCGCC TTTCGCTTGCGCAAG TERM 101 229321 - 229342 + r 74 -5.9 -4.54727 | overlap 229322 CTAGGCGATTATCGC CTTTCGCTT GCGC AAGCGAAAA TTTTCATTTGCGCAG Synpcc7942_0233 230054 - 229629 - | hypothetical protein Synpcc7942_0234 231150 - 230158 - | hypothetical protein Synpcc7942_0235 231162 - 231677 + | cyclic nucleotide-binding domain-containing protein Synpcc7942_0236 232018 - 232557 + | cyclic nucleotide-binding domain-containing protein Synpcc7942_0237 233143 - 232565 - | hypothetical protein Synpcc7942_0238 234324 - 233143 - | hypothetical protein Synpcc7942_0239 234669 - 234331 - | cytochrome C6 soluble cytochrome f TERM 102 234810 - 234773 - R 76 -7.8 -4.15453 | GAATTGACGGGAAAA GCGATCGACC-CAGAAGC CAGA GCC-CTGCAGCCGATCGC TTTCAGTTCAGCCAA Synpcc7942_0240 235342 - 234851 - | hypothetical protein TERM 103 236558 - 236536 - g 76 -7.1 -4.68103 | gap 1, opp_overlap 236535 236536 236553 GCAAGCGCAACAAAA TGCTGATCGC AATG GC-ATCAGCA ATGTTGAATTTCGGG Synpcc7942_0241 235487 - 236854 + | 23S rRNA (uracil-5-)-methyltransferase RumA TERM 104 237099 - 237134 + T 77 -11.9 -3.15544 | gap 1 CTAGAGTTGACGGCT CCGCTCGCCTCTGGCA GCTCA TGCTTGAG-CGAGCGG TTGATCCACGTGAGC Synpcc7942_0242 238275 - 237166 - | K+-dependent Na+/Ca+ exchanger related-protein TERM 105 237789 - 237807 + g 71 -8.8 -3.7941 | overlap 237792 CCTCGGCATATTCCG CCTGAACC TCT GGGTCAGG TTCTTCTCCCCCCTG TERM 106 238336 - 238321 - R 100 -8.2 -5.60993 | opp_overlap 238321 TCGCCCATAAAAAAA CCCCGC GTGG GCAGGG TTTAACGGTATTGCT Synpcc7942_0243 238522 - 238379 - | high light inducible polypeptide HliC Synpcc7942_0244 241156 - 238622 - | glycogen/starch/alpha-glucan phosphorylase TERM 107 239344 - 239334 - G 79 -6.8 -4.78848 | opp_overlap 239342 CCCGCAAAGATAAAA GTGC GCG GCAC CAGGTTGAGCTGGGG Synpcc7942_0245 242229 - 241168 - | glyceraldehyde-3-phosphate dehydrogenase Synpcc7942_0246 242421 - 243500 + | extracellular solute-binding protein TERM 108 244203 - 244181 - g 70 -12 -2.62192 | overlap 244180 GCTGACCCAACTAAG CTGGCCGCAG CAA CTGCAACCAG GCCAAATTCGCGGGG Synpcc7942_0247 243507 - 244640 + | ABC-type permease for basic amino acids and glutamine Synpcc7942_0248 244642 - 245832 + | amino acid ABC transporter permease Synpcc7942_0249 245851 - 246636 + | ATPase Synpcc7942_0250 246639 - 247106 + | hypothetical protein TERM 109 247822 - 247779 - g 86 -7.5 -4.98857 | AGCCAAGCACAAAAA CAGCTAGAG-ACCTTGGCATC GGTT GA-GCCGCGGTACTCTAGCCG CAATAGTACGCCTCT Synpcc7942_0251 247110 - 247880 + | exonuclease Synpcc7942_0252 248136 - 247909 - | hypothetical protein Synpcc7942_0253 248629 - 248171 - | hypothetical protein TERM 110 248796 - 248812 + H 86 -6.5 -5.03747 | CAATAGCTTGATTTT GCGGC AGTTTAG GCCGC TTTTTTCGCCGCTTT Synpcc7942_0254 248859 - 251429 + | DNA gyrase subunit A TERM 111 251452 - 251467 + T 100 -8.2 -5.28176 | ATTTCGATGGATTCA GGGGCT TTAC GGCCCC TTTTTTGTACATCAG Synpcc7942_0255 252783 - 251503 - | ATPase Synpcc7942_0256 252873 - 254099 + | peptidase M20D, amidohydrolase Synpcc7942_0257 254845 - 254096 - | hypothetical protein Synpcc7942_0258 254894 - 255334 + | hypothetical protein TERM 112 255516 - 255504 - g 77 -2.7 -5.02074 | CTATTCGGCAAAAAA GAAAA ATT CTTTC TTGAAATTGATTCAA Synpcc7942_0259 255474 - 255806 + | hypothetical protein TERM 113 255845 - 255868 + T 100 -11.1 -5.05782 | opp_overlap 255845 255848 CAATTGAAGCTCAAA CAACCTCTC GGCTTG GAGAGGTTG TTTTTTGCGATCGCT TERM 114 255868 - 255845 - T 81 -11.1 -3.67864 | opp_overlap 255845, overlap 255848 CAATTGAAGCTCAAA CAACCTCTC GGCTTG GAGAGGTTG TTTTTTGCGATCGCT TERM 115 255902 - 255927 + T 81 -12.7 -3.18264 | opp_overlap 255902 TGCGCACAGAAAAAA GGTCTATCCAG AACT TTGGATAGACC TTAGTGAATCAACAA TERM 116 255927 - 255902 - T 100 -12 -5.36441 | opp_overlap 255902 TGCGCACAGAAAAAA GGTCTATCCA GAACTT TGGATAGACC TTAGTGAATCAACAA Synpcc7942_0260 258435 - 255961 - | ATPase TERM 117 257288 - 257342 + g 72 -3.5 -4.78752 | gap 1, opp_overlap 257284, overlap 257290 257310 TCGGGTAGGAAGCGA TCGCTGATGTAGCGATCG-GCCAGCT TGGC AGCTGCTTCCAACGCTTCATCGGCAA TTTTTAGCTTGTGGT Synpcc7942_0261 259178 - 258579 - | ribosomal-protein-alanine acetyltransferase Synpcc7942_0262 259226 - 260620 + | diaminopimelate decarboxylase Synpcc7942_0263 260700 - 261620 + | hypothetical protein Synpcc7942_0264 261617 - 262372 + | undecaprenyl pyrophosphate synthetase Synpcc7942_0265 262660 - 262385 - | hypothetical protein Synpcc7942_0266 263195 - 262638 - | heat shock protein DnaJ-like TERM 118 263526 - 263561 + H 77 -2.7 -5.14965 | overlap 263537 AAAGCGGCCCTCAAG TCTGTCATTCA-CTTCC TGTC GGAAGCTGCA-GGCAGA TTTTTTACTCCAGCT TERM 119 263713 - 263657 - H 89 -13 -3.41229 | gap 1, opp_overlap 263687, overlap 263658 AGACTGGGACCAGAA CCCCCCTCCA-GCCGGCGATCCATCAC TCAT GCGAACGATCGCTGGCTTGGAAGGGAA TGAGCGATCGCCGTA TERM 120 263712 - 263658 - H 84 -14.3 -2.64416 | gap 1, opp_overlap 263687, overlap 263657 GACTGGGACCAGAAC CCCCCTCCA-GCCGGCGATCCATCAC TCAT GCGAACGATCGCTGGCTTGGAAGGGA ATGAGCGATCGCCGT TERM 121 264434 - 264421 - g 84 -9.5 -4.37886 | overlap 264423 TCACCCTCCAGAAAA CGGCG CAGA CGCCG GCAGCCTATCCGCGC gidB 263757 - 264485 + | glucose-inhibited division protein B Synpcc7942_0268 264964 - 264482 - | hypothetical protein Synpcc7942_0269 265857 - 264976 - | hypothetical protein Synpcc7942_0270 265975 - 267168 + | TPR repeat-containing protein Synpcc7942_0271 267165 - 267896 + | uroporphyrinogen-III C-methyltransferase Synpcc7942_0272 267889 - 268683 + | uroporphyrinogen-III synthase Synpcc7942_0273 268662 - 269291 + | dephospho-CoA kinase TERM 122 269634 - 269650 + G 81 -10.9 -4.09519 | opp_overlap 269633 269629 TCGTCGAGAAGCTAT CTTGAGC ACA GCTCAAG TTATTTATGAGTCGT Synpcc7942_0274 269329 - 269667 + | hypothetical protein Synpcc7942_0275 269657 - 269989 + | hypothetical protein Synpcc7942_0276 271473 - 270001 - | glycolate oxidase subunit GlcD ligA 273532 - 271493 - | NAD-dependent DNA ligase LigA TERM 123 273687 - 273673 - g 72 -10 -3.55444 | TGGCTACTTCTGAAA CGACAC CCA GTGTCG ATCCTCGTCGTCGTC Synpcc7942_0278 273657 - 274154 + | bidirectional hydrogenase complex protein HoxE Synpcc7942_0279 274154 - 275758 + | NADH dehydrogenase (quinone) Synpcc7942_0280 277033 - 275768 - | competence damage-inducible protein A Synpcc7942_0281 278116 - 277043 - | glycosyltransferase TERM 124 277841 - 277820 - G 74 -2.9 -4.87291 | overlap 277823 GAGGCCAATCAAAAA GAAGACCAG CCCA CCGATCGTC ACGCCCCAGATTTCG glyA 279422 - 278139 - | serine hydroxymethyltransferase Synpcc7942_0283 280623 - 279619 - | dihydrouridine synthase TIM-barrel protein nifR3 TERM 125 280230 - 280254 + g 77 -11.3 -3.58536 | overlap 280251 TCGCCAGTTCTGGCT CGCGGAGGAGC GCG GATCCACCGCG TTTGCGCGTCACTTT TERM 126 280675 - 280691 + H 75 -4.3 -4.77036 | overlap 280676 TTGATGGCTCTTCCA TCCCGCT GCG ATCGGGG TTTTTGCTGATGCCA Synpcc7942_0284 280701 - 281009 + | carbon dioxide concentrating mechanism protein CcmK Synpcc7942_0285 281054 - 281395 + | carbon dioxide concentrating mechanism protein CcmK TERM 127 281426 - 281451 + F 100 -13.3 -4.72272 | AAAAGGGTTGATTTG GGCTGAGGGGC GATC GCTCCTTAGCC TTTTTGATAGGGAAG Synpcc7942_0286 281480 - 281842 + | hypothetical protein Synpcc7942_0287 281897 - 282592 + | hypothetical protein Synpcc7942_0288 283962 - 282604 - | glucosamine-1-phosphate N-acetyltransferase / UDP-N-acetylglucosamine pyrophosphorylase TERM 128 284105 - 284124 + H 72 -4.8 -4.62069 | overlap 284104 284091 284107 AGCGAGAGACTTGCT CCGGCGCG GGTT CTCGCCTG TTTTTCGCCTAACCG TERM 129 285450 - 285421 - g 72 -5.7 -4.37092 | gap 1 ATGTCGTCTACAAAA CTGAGATCGGCAAG TGG CGTGC-GATCGCAG CGGACTGTGCTGAAC TERM 130 285922 - 285908 - g 79 -10 -4.11692 | TACTGAGGCCGAAAA GCTGCT GAA AGCAGC GGTAGACCTCGGGGT secA 284148 - 286994 + | preprotein translocase subunit SecA Synpcc7942_0290 287003 - 288139 + | dihydroorotate dehydrogenase 2 Synpcc7942_0291 288312 - 288530 + | hypothetical protein Synpcc7942_0292 288534 - 289760 + | bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase Synpcc7942_0293 290095 - 289757 - | hypothetical protein Synpcc7942_0294 290394 - 291227 + | photosystem II manganese-stabilizing polypeptide TERM 131 291294 - 291319 + F 100 -13.3 -4.52589 | TGAAATCTCGACTGG GGGCATTGGGC GATC GCTCGATGCCC TTTTGTCTAGCGACC sat 291417 - 292604 + | sulfate adenylyltransferase TERM 132 293276 - 293295 + G 83 -7.8 -4.72272 | overlap 293277 CTGGCTTTGGCCCAC CCGATCGC CCTA GCGATCGC TTTTTCATGCGAGGC TERM 133 293277 - 293294 + G 75 -11.3 -3.43042 | overlap 293276 TGGCTTTGGCCCACC CGATCGC CCTA GCGATCG CTTTTTCATGCGAGG TERM 134 294249 - 294220 - g 71 -7.1 -4.21438 | gap 1, overlap 294221 GATCGCAAGAAACAA CTGGCACAGCGTCA GAC TGCAGCTGTGCC-G CTCCCTGATCCGGGC Synpcc7942_0296 292750 - 294765 + | hypothetical protein Synpcc7942_0297 294872 - 296713 + | FtsH peptidase TERM 135 296739 - 296759 + T 100 -11.1 -5.57396 | opp_overlap 296739 GATTGACAGCACTAA CGGGAGTCG CAC TGGCTCCCG TTTTTTGTTGCTTGT Synpcc7942_0298 297627 - 296980 - | hypothetical protein Synpcc7942_0299 298373 - 297624 - | rod shape-determining protein MreC TERM 136 298134 - 298154 + g 74 -11.1 -3.35679 | CAGGGCTAGCTGCTG GCGGAGCAC ACG GTTCTCCGC TTCTGCCTCCAAGAG Synpcc7942_0300 299435 - 298398 - | rod shape-determining protein MreB TERM 137 298605 - 298615 + g 75 -2.4 -5.02074 | GATATCAGCAGCCAG CTCC GGC GGTG TTTTTTCGAGGGTGC TERM 138 298765 - 298795 + g 71 -4.7 -4.58773 | opp_overlap 298765 GTTGTCTCATCAAAT TCGTTGTCGGG GAAGGCCGA CCCGACCATGA TTTTAATTTCCTCAG Synpcc7942_0301 299628 - 299990 + | single-strand DNA-binding protein Synpcc7942_0302 301447 - 300008 - | phospholipase D/transphosphatidylase Synpcc7942_0303 301543 - 302697 + | response regulator receiver domain-containing protein Synpcc7942_0304 302833 - 303480 + | hypothetical protein Synpcc7942_0305 303815 - 304045 + | hypothetical protein Synpcc7942_0306 304347 - 304039 - | hypothetical protein Synpcc7942_0307 305936 - 304710 - | Na+/H+ antiporter TERM 139 305886 - 305862 - G 73 -5 -4.58283 | gap 1, overlap 305864 CAAGGGTGGCAAAAA GAGCGCTGTCA TCAA CAACAGCGC-C ATGGCAGGCAGGGGA TERM 140 305885 - 305864 - G 73 -8.7 -3.90316 | overlap 305862 AGGGTGGCAAAAAGA GCGCTGTCA TCAA CAACAGCGC CATGGCAGGCAGGGG Synpcc7942_0308 307108 - 305969 - | CO2 hydration protein Synpcc7942_0309 309043 - 307139 - | NAD(P)H-quinone oxidoreductase subunit F TERM 141 308674 - 308663 - G 86 -7.2 -5.00616 | CGCTGCTTCAAAAAA GCCC ATCA GGGC AAAGAAGCGGGCGAG Synpcc7942_0310 310417 - 309473 - | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase ksgA 311253 - 310414 - | dimethyladenosine transferase TERM 142 311188 - 311157 - G 71 -7.8 -4.15106 | overlap 311158 GACCAATCTCTAAAA CGCGATCGCTGGGC CGCA GCTCAGCGGCCGCC ACAATGCGATCGAGG TERM 143 311187 - 311158 - G 71 -11.3 -3.08581 | overlap 311157 ACCAATCTCTAAAAC GCGATCGCTGGGC CGCA GCTCAGCGGCCGC CACAATGCGATCGAG Synpcc7942_0312 311708 - 311280 - | hypothetical protein Synpcc7942_0313 311762 - 312274 + | hypothetical protein TERM 144 312323 - 312340 + T 100 -9.9 -5.63103 | ACTCATAACTCTCAA GCCTTTC GAAT GAAAGGC TTTTTTTAGTTAAAA Synpcc7942_0314 313032 - 312403 - | succinate dehydrogenase subunit C Synpcc7942_0315 314374 - 313079 - | adenylosuccinate lyase TERM 145 313583 - 313594 + g 75 -5.8 -4.62471 | GCGCTTGTGGGGCAT GGCT GAGG AGCC TTTTTGACCCTTGGC TERM 146 313739 - 313771 + g 76 -7 -4.58395 | gap 1, overlap 313740 313742 ATCGCGGCTGACCAC TTGGGTC-GAAGCCG TATC CGGCTCCAGACCTAG TTTTTGACAGGTCAG TERM 147 314299 - 314310 + g 72 -5.8 -4.39571 | AAACGGCAATTTCAA CCTG CAGC CAGG TTTTGAGTTTGTAGG Synpcc7942_0316 314623 - 314432 - | hypothetical protein Synpcc7942_0317 314897 - 315355 + | hypothetical protein Synpcc7942_0318 315642 - 316097 + | hypothetical protein Synpcc7942_0319 316162 - 316980 + | hemolysin A Synpcc7942_0320 317010 - 318008 + | UDP-galactose 4-epimerase TERM 148 318140 - 318162 + T 81 -6.2 -4.83615 | overlap 318135 ACCTGCTGTTGTCGA CGCTGACTTA GAT TGCGTCGGCG TTTTTCTCGCCGGTG Synpcc7942_0321 318485 - 318147 - | nitrogen regulatory protein P-II Synpcc7942_0322 320049 - 318679 - | c-type cytochrome biogenesis protein Synpcc7942_0323 320804 - 320046 - | cytochrome c biogenesis protein-like Synpcc7942_0324 322008 - 320824 - | cell division protein FtsW TERM 149 322065 - 322030 - R 100 -4 -5.61596 | gap 1, opp_overlap 322030 322059, overlap 322053 322054 ATCGCCATAAAAAAA CTCTCGG-CACACTC ACTATAA GAGTCAGACCGAGAG TCGGTTCGATTGCAA Synpcc7942_0325 322296 - 322093 - | LC 7.8 apoprotein (core components of the phycobilisomes) Synpcc7942_0326 322873 - 322388 - | allophycocyanin, beta subunit Synpcc7942_0327 323415 - 322930 - | allophycocyanin alpha chain TERM 150 323756 - 323720 - R 100 -19.6 -4.64657 | TTAAATGCCCAAAAA GCTGTGAGCGTCTAGG TTTTG CCCAAACGCTCACAGC CAGAATCTGAGGAGA Synpcc7942_0328 325898 - 323781 - | phycobilisome core-membrane linker polypeptide TERM 151 323939 - 323889 - G 71 -11 -3.1479 | AGAACGCAGAGCCAA GCCTTTGGGGGTGATATAGCGCTC GTA GGGCACCGTATCTTCCCCGAAGGC AGCAATGTACTCGGG TERM 152 324158 - 324171 + g 73 -8.1 -4.15508 | GCACAAACTCCCGCA CGGTG ATTT CACCG TTTTCGAGCTTGATT TERM 153 326030 - 326050 + H 95 -6.7 -5.4505 | opp_overlap 326031, overlap 326031 TTTGTTTTAGATTAG AGCGTGCCG TGG CGGCACCCC TTTTTTGTTAACAAA TERM 154 326031 - 326049 + H 81 -10.2 -3.86307 | opp_overlap 326031, overlap 326030 TTGTTTTAGATTAGA GCGTGCCG TGG CGGCACCC CTTTTTTGTTAACAA Synpcc7942_0329 326113 - 327357 + | hypothetical protein Synpcc7942_0330 327394 - 327900 + | hypothetical protein TERM 155 328388 - 328407 + G 70 -10 -3.53012 | GCGCTATTGACCTCG CTGGCGTA CTTT TACGCCGG TTTCAGCCGCAAAGG Synpcc7942_0331 327926 - 328711 + | F0F1 ATP synthase subunit A Synpcc7942_0332 328854 - 329099 + | F0F1 ATP synthase subunit C TERM 156 329114 - 329143 + F 72 -10 -3.3517 | gap 1, overlap 329112 329115 AGCTTAGCTATCCTT CGGGGCGGTCTCA TGGGT TGAG-CCGCCCCC TCTTCTGTGCTCAAT TERM 157 329115 - 329142 + F 81 -13.5 -2.6062 | gap 1, overlap 329114 329112 GCTTAGCTATCCTTC GGGGCGGTCTCA TGGGT TGAG-CCGCCCC CTCTTCTGTGCTCAA TERM 158 329658 - 329640 - g 73 -8.8 -3.99592 | ATTGACCAGCAGAAA GCGGTTGC TTT GCAAGCGC TCGATCAGCAAGTCG Synpcc7942_0333 329244 - 329720 + | F0F1 ATP synthase subunit B' Synpcc7942_0334 329764 - 330279 + | F0F1 ATP synthase subunit B Synpcc7942_0335 330289 - 330831 + | F0F1 ATP synthase subunit delta Synpcc7942_0336 330878 - 332395 + | F0F1 ATP synthase subunit alpha TERM 159 332411 - 332442 + F 82 -7.9 -4.57073 | overlap 332412 332413 TCGTTCACACACTGG TTGGCGCTGCCTA ATTGAC TGGGCGGCGCCGC TTTTTGGAGAAGCTC TERM 160 332412 - 332441 + F 80 -11.4 -3.33922 | overlap 332411 332413 CGTTCACACACTGGT TGGCGCTGCCTA ATTGAC TGGGCGGCGCCG CTTTTTGGAGAAGCT TERM 161 332413 - 332440 + F 76 -12.7 -2.60032 | overlap 332412 332411 GTTCACACACTGGTT GGCGCTGCCTA ATTGAC TGGGCGGCGCC GCTTTTTGGAGAAGC Synpcc7942_0337 332458 - 333408 + | F0F1 ATP synthase subunit gamma TERM 162 333424 - 333457 + F 77 -11.7 -3.21099 | opp_overlap 333424 333427, overlap 333428 GTTCTTCCCGAAACA GAGGCCGCGCTTGAG TGAA TTCGGGCGCGGTTTC TTGGTGCTGAACCGG TERM 163 333428 - 333453 + F 91 -11.1 -4.2704 | opp_overlap 333427 333424, overlap 333424 TTCCCGAAACAGAGG CCGCGCTTGAG TGAA TTCGGGCGCGG TTTCTTGGTGCTGAA Synpcc7942_0338 333517 - 333834 + | ferredoxin (2Fe-2S) Synpcc7942_0339 333995 - 335074 + | hypothetical protein TERM 164 335295 - 335309 + G 74 -2.8 -4.86621 | ACTTTGGCCGGGCTA TCGC CACAGCA GCGA TTTTTACTTGGCGAT Synpcc7942_0340 335071 - 335652 + | hypothetical protein TERM 165 335895 - 335905 + G 77 -8.2 -4.19735 | overlap 335904 ATCAGATTTGCCTTG GCGC GAT GCGC TTTCGTTTTCGGGGG Synpcc7942_0341 335633 - 336205 + | hypothetical protein Synpcc7942_0342 336363 - 336590 + | hypothetical protein TERM 166 336849 - 336829 - g 86 -5.3 -5.24531 | overlap 336830 ATGCCCCAGAAAAAA GCGCCGC TCAAGCT GAGGCGC GTCAGCTGATCAATG Synpcc7942_0343 336654 - 337055 + | photosystem II 11 kD protein TERM 167 337090 - 337122 + T 95 -9.2 -5.00884 | gap 2 GAATTGAGATTGCGA GCGGAC-GCT-GACCC CAG GGATCTAGCCGTCCGC TTTTTTGCAGGCGAT Synpcc7942_0344 338451 - 337408 - | peptidase Synpcc7942_0345 339306 - 338536 - | biotin--acetyl-CoA-carboxylase ligase Synpcc7942_0346 339352 - 340131 + | hypothetical protein Synpcc7942_0347 340288 - 340452 + | hypothetical protein TERM 168 340509 - 340531 + T 95 -12 -4.34402 | CTGCCAAAAAGTCGA GTCCTCGGTC AGC GATCGGGGAC TTTTGCTGTGCAGGG recA 341768 - 340698 - | recombinase A TERM 169 340758 - 340775 + g 75 -6.3 -4.57073 | gap 1, opp_overlap 340758 340757 TGTGTTGGCCGAAAC TTGAGCCC CGA GGGC-CAA TTTTTCGCGCACCTG TERM 170 341134 - 341158 + g 79 -4.1 -5.01732 | CCGCCTGTGGTGGTC TCGGGGCTGCC GTA GGTGACACCGA TTTTTTGGCGCAATT TERM 171 341510 - 341536 + g 71 -7.2 -4.0896 | CCTGCTTTTGGACTT CTGCGATCGCGT GGA GCGTGAGCGTAG TTTTACCCGAGCTTT Synpcc7942_0349 342443 - 341883 - | hypothetical protein TERM 172 342642 - 342666 + H 88 -10.7 -4.09864 | CGTACGTGCAGCATC GTGACCTGTCG AAG CGACGGATCAC TTTTGAAACATCACT TERM 173 342874 - 342854 - g 73 -8.3 -4.08216 | overlap 342857 CGACCTTCCCTAAAA TATGGGCAA TCT TTGCCCCTA CGCTGATGTCGAGCC Synpcc7942_0350 342793 - 343671 + | ATPase TERM 174 344106 - 344072 - g 79 -10 -4.07687 | gap 1, opp_overlap 344073 344074 344075, overlap 344073 344076 AGGTTCTGGCTAAAA CCCAGCCGCGATCGC CTAACT GCGATCGCG-CCGTG ATTCTTTGCAATGGC TERM 175 344103 - 344076 - g 74 -12.7 -2.74605 | opp_overlap 344075 344074 344073, overlap 344072 344073 TCTGGCTAAAACCCA GCCGCGATCGC CTAACT GCGATCGCGCC GTGATTCTTTGCAAT Synpcc7942_0351 343699 - 344832 + | putative ABC transport system substrate-binding protein Synpcc7942_0352 345431 - 344823 - | methionine sulfoxide reductase B TERM 176 344926 - 344946 + g 71 -11.1 -3.08679 | overlap 344943 ACATGGCCTTGGTGT CCACCGCAG CGG CTGCAGTGG TATTCCGTGCGCGGA TERM 177 345080 - 345067 - G 79 -8.1 -4.46112 | opp_overlap 345069, overlap 345069 GCGGACTCAAACAAA GGCTG CTCG CAGCC AGCGCAGCAGTATTG TERM 178 345651 - 345676 + G 79 -9.7 -4.08216 | opp_overlap 345662 TTCAACGAGTGAGTC GCCTGCCAAGA GCCG TCTTGACGGGC TTTTGCGCCCAGTAC Synpcc7942_0353 345470 - 346432 + | Na+-dependent transporter-like TERM 179 346636 - 346646 + T 72 -6.8 -4.17132 | opp_overlap 346636 346634 CTAAAGGACACAACA CCAC TTC GTGG TTTCTTGCAGGCTTT Synpcc7942_0354 348460 - 346832 - | Beta-glucosidase-related glycosidase-like rbfA 348870 - 348457 - | ribosome-binding factor A Synpcc7942_0356 349146 - 348922 - | hypothetical protein TERM 180 349861 - 349879 + r 82 -3 -5.22312 | GGGTGCACAGGAATT TGTTGGGG AGC CCGCTACA TTTTTTCGTCTGAAT Synpcc7942_0357 351278 - 349875 - | inorganic carbon transporter TERM 181 350825 - 350813 - G 76 -4.1 -4.90455 | AGACACTGACAAAAA GCGAT GTG ATCAC GACGACCGAGAACAG trmB 351950 - 351309 - | tRNA (guanine-N(7))-methyltransferase Synpcc7942_0360 354299 - 353103 - | hypothetical protein Synpcc7942_0359 352026 - 353207 + | hypothetical protein Synpcc7942_0361 354532 - 354759 + | hypothetical protein TERM 182 354804 - 354827 + F 82 -9.6 -4.23892 | GTATGCTGATCGACA GGCTTGGGAA GAAT TTCCTGAGCC TTTTGCGTGATTGAG Synpcc7942_0362 354884 - 355483 + | hypothetical protein TERM 183 355753 - 355727 - g 77 -12.3 -3.30124 | TCGCAGTCCCTACAA TGCGGAGCAGC CTCTC GCTCCTCCGCA GACTTGGGCAGATTT Synpcc7942_0363 355509 - 355793 + | hypothetical protein Synpcc7942_0364 355865 - 356416 + | hypothetical protein Synpcc7942_0365 356676 - 357305 + | response regulator receiver domain-containing protein TERM 184 359100 - 359120 + G 72 -9.7 -3.61103 | overlap 359101 GGAGCGGATTCCTCA ACGGCTGAA GTC TTCAGCCGC TTTGCCGTGGAATTG TERM 185 359101 - 359119 + G 74 -13.2 -2.7634 | overlap 359100 GAGCGGATTCCTCAA CGGCTGAA GTC TTCAGCCG CTTTGCCGTGGAATT Synpcc7942_0366 357549 - 359732 + | putative sulfate transporter Synpcc7942_0367 360690 - 359767 - | Na+-dependent transporter-like TERM 186 360329 - 360319 - G 76 -6.8 -4.65895 | overlap 360321 TGTCTGATCTAAAAA GGCT TGG AGCC CGAGGTTGACGACCC TERM 187 360954 - 360968 + G 84 -5.6 -5.03994 | TCCAGTTGCAAGCCC CACGCC GTT GGCCTG TTTTTCTCTCTGAAA xseA 360711 - 362063 + | exodeoxyribonuclease VII large subunit Synpcc7942_0369 362147 - 363601 + | putative flavin-containing monoamine oxidase Synpcc7942_0370 363763 - 365067 + | O-acetylhomoserine/O-acetylserine sulfhydrylase TERM 188 365598 - 365614 + G 77 -2.9 -5.06451 | opp_overlap 365592, overlap 365599 AAAGCAAACCTTGCC AGCCAAG CGC TTTGGCG TTTTTTGGCATCATC Synpcc7942_0371 365116 - 366015 + | homoserine O-succinyltransferase Synpcc7942_0373 368024 - 366738 - | hypothetical protein Synpcc7942_0372 366053 - 366853 + | hypothetical protein Synpcc7942_0374 368574 - 368290 - | hypothetical protein TERM 189 368895 - 368914 + r 100 -11.4 -5.06816 | gap 1, opp_overlap 368895 AACCATTCCTCAGAA GCCCCCAGG GAG CC-GGGGGC TTTTTCTTGCGAGAT TERM 190 368914 - 368895 - R 83 -12.8 -3.30619 | opp_overlap 368895 AACCATTCCTCAGAA GCCCCCAG GGAG CCGGGGGC TTTTTCTTGCGAGAT Synpcc7942_0375 370344 - 368929 - | processing protease Synpcc7942_0376 371867 - 370341 - | putative zinc protease protein Synpcc7942_0377 372206 - 371868 - | hypothetical protein Synpcc7942_0378 372532 - 373326 + | hypothetical protein Synpcc7942_0379 373380 - 373763 + | hypothetical protein TERM 191 374075 - 374049 - g 75 -5.9 -4.65895 | gap 2 GCTTCGATTGAAAAA CTGGA-GCG-CCG CCG CGATCGCATCCAG CAGGAAATTCGCAGC TERM 192 374412 - 374426 + G 81 -4.2 -5.0538 | GCAGTTCATGAAGAG CCAGTC CGC GAGTGG TTTTTTACGATGGGC Synpcc7942_0380 373785 - 374828 + | hypothetical protein Synpcc7942_0381 375346 - 375032 - | hypothetical protein Synpcc7942_0382 375722 - 375456 - | hypothetical protein Synpcc7942_0383 376448 - 375762 - | hypothetical protein Synpcc7942_0384 377237 - 376527 - | hypothetical protein TERM 193 377101 - 377089 - G 100 -4.7 -5.7946 | overlap 377090 GGTCCAACAAAAAAA GGCAG TGC CAGCC ACCCCAGGATTGGCA TERM 194 377272 - 377299 + r 76 -12.8 -2.61264 | opp_overlap 377277, overlap 377277 TAGCGGTACTCAATA AAAAACGGCTCC TGCA GGAGCCGTTTTG ATTGTGCATCAGAGG TERM 195 377277 - 377294 + r 100 -12.7 -4.50058 | opp_overlap 377277, overlap 377272 GTACTCAATAAAAAA CGGCTCC TGCA GGAGCCG TTTTGATTGTGCATC TERM 196 377294 - 377277 - R 100 -12.7 -5.4833 | opp_overlap 377277 377272 GTACTCAATAAAAAA CGGCTCC TGCA GGAGCCG TTTTGATTGTGCATC Synpcc7942_0385 378694 - 377321 - | geranylgeranyl reductase TERM 197 379139 - 379166 + G 75 -2.6 -5.0133 | GGGCCTCCTGATCAA GCGCTGGATGTT ACTG AGCATTCTGGGC TTTTTTGCCGCCCTG Synpcc7942_0386 378981 - 380390 + | hypothetical protein Synpcc7942_0387 380395 - 380901 + | hypothetical protein Synpcc7942_0388 381991 - 380870 - | glycosyltransferase Synpcc7942_0389 382081 - 382332 + | hypothetical protein Synpcc7942_0390 383454 - 382303 - | chromate transporter Synpcc7942_0391 385125 - 383545 - | hypothetical protein TERM 198 384396 - 384373 - G 75 -9.6 -3.74077 | gap 1, opp_overlap 384356 TGCCAGATAGGCAAA GGTCTGGCGCG TTT CGC-CCAAACC ATGGGAAACCACCAC Synpcc7942_0392 386528 - 385350 - | membrane-bound lytic transglycosylase A TERM 199 385891 - 385881 - G 74 -4.6 -4.76041 | GACATGGACCAAAAA GGCC GCT AGCC GATCGCTCAGCCAGA Synpcc7942_0393 386677 - 387357 + | hypothetical protein Synpcc7942_0394 388220 - 387354 - | phosphatidate cytidylyltransferase Synpcc7942_0395 388494 - 389618 + | hypothetical protein TERM 200 390848 - 390838 - g 79 -6.8 -4.72986 | opp_overlap 390844 390844 GATGCCTATCAAAAA GCGT TTG ACGC GGACTCCGTCTCTGC purH 389953 - 391494 + | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase Synpcc7942_0397 391532 - 392923 + | putative neutral invertase Synpcc7942_0398 392990 - 393448 + | hypothetical protein TERM 201 393491 - 393516 + T 93 -8.9 -4.76041 | opp_overlap 393494 TCAGGTCGCTTTTAA GCAGTCCTTCC GTTG GGTTGGACTGC TTTTTGCTGGCTGTG Synpcc7942_0399 394545 - 393793 - | hypothetical protein Synpcc7942_0400 395181 - 394579 - | anthranilate synthase, component II Synpcc7942_0401 395731 - 395246 - | diacylglycerol kinase Synpcc7942_0402 397396 - 396872 - | putative metalloprotease Synpcc7942_0403 397577 - 397398 - | hypothetical protein prfB 398509 - 397595 - | peptide chain release factor 2 Synpcc7942_0405 398870 - 399868 + | DNA polymerase III subunit delta Synpcc7942_0406 399953 - 400354 + | hypothetical protein Synpcc7942_0407 400671 - 400429 - | photosystem I reaction center subunit X TERM 202 400728 - 400712 - H 72 -8 -3.85864 | CCAGCATGATAAGAA TCAGGC TGCCT GCCTGA CGCAAGGCTTGCCAA Synpcc7942_0408 400768 - 401421 + | N-(5'-phosphoribosyl)anthranilate isomerase Synpcc7942_0409 401748 - 401464 - | hypothetical protein Synpcc7942_0410 402022 - 401750 - | hypothetical protein trpA 402991 - 402191 - | tryptophan synthase subunit alpha Synpcc7942_0412 403351 - 403022 - | hypothetical protein Synpcc7942_0413 403768 - 403352 - | hypothetical protein TERM 203 403764 - 403750 - G 72 -5.8 -4.36595 | CAGGGAAACCTAAAA CTTTAA ACA TTAAAG TCATGGCAATCCTGA Synpcc7942_0414 404016 - 405188 + | hypothetical protein Synpcc7942_0415 406145 - 405168 - | hypothetical protein TERM 204 406265 - 406279 + H 70 -4.2 -4.59853 | opp_overlap 406256 406253, overlap 406267 CAACTACTGCGATCG CAGCAA CCT TTGCCG TTTTTGGAGCATTGA Synpcc7942_0416 406389 - 406772 + | hypothetical protein TERM 205 408326 - 408353 + G 86 -15 -3.31799 | gap 1, opp_overlap 408276 408277 TCGACCCGCTGCGGC CTCC-GTCGCTGA ATA TCAGCGACTGGAG TTCTAAAGGCTTCTC Synpcc7942_0417 406851 - 408359 + | ATPase Synpcc7942_0418 408494 - 408844 + | hypothetical protein TERM 206 408872 - 408891 + T 100 -13.6 -5.4251 | opp_overlap 408872 CGTTCCACGATGGAA GGGGTAGG ACAA CCTACCCC TTTTTTCTGTATCGG TERM 207 408891 - 408872 - T 87 -13.6 -3.09516 | opp_overlap 408872 CGTTCCACGATGGAA GGGGTAGG ACAA CCTACCCC TTTTTTCTGTATCGG Synpcc7942_0419 409903 - 408941 - | biotin synthase Synpcc7942_0420 411516 - 409951 - | hypothetical protein Synpcc7942_0421 411946 - 411548 - | hypothetical protein Synpcc7942_0422 412147 - 413289 + | hypothetical protein Synpcc7942_0423 413614 - 413396 - | hypothetical protein TERM 208 413850 - 413824 - H 84 -8.1 -4.62069 | opp_overlap 413823 413822 CTCCTAGCCTAAAAA GCAAGAGTTTT TAACT AAGACTCTTGC CCTTTACAACCTCAA TERM 209 414901 - 414939 + G 85 -16.1 -3.18199 | gap 1, overlap 414914 CTTCCCGCTCGACTT GGCAGCAGGCGAAGCGAC CCCG GTCGCTTTGACTGC-GCC TTCAATTCACGGTTA Synpcc7942_0424 413873 - 414955 + | photosystem q(b) protein TERM 210 414980 - 415017 + T 81 -12.1 -3.22208 | opp_overlap 414983 414990, overlap 414983 414990 TTACAGCAGTCTGAA TAATCAAAAAGCGCCTC GAAT GGGGCGCTTTTTGATGC TTGGATATTGATTGT TERM 211 415014 - 414983 - T 100 -16 -3.63991 | opp_overlap 414983 414980 414990, overlap 414990 CAGCAGTCTGAATAA TCAAAAAGCGCCTC GAAT GGGGCGCTTTTTGA TGCTTGGATATTGAT TERM 212 414983 - 415014 + T 100 -18.2 -2.79248 | opp_overlap 414983 414990, overlap 414980 414990 CAGCAGTCTGAATAA TCAAAAAGCGCCTC GAAT GGGGCGCTTTTTGA TGCTTGGATATTGAT TERM 213 414990 - 415007 + T 100 -10.5 -4.81083 | opp_overlap 414983 414990, overlap 414983 414980 CTGAATAATCAAAAA GCGCCTC GAAT GGGGCGC TTTTTGATGCTTGGA TERM 214 415007 - 414990 - T 93 -8.3 -4.99435 | opp_overlap 414990 414983 414980, overlap 414983 CTGAATAATCAAAAA GCGCCTC GAAT GGGGCGC TTTTTGATGCTTGGA Synpcc7942_0425 415441 - 415064 - | hypothetical protein Synpcc7942_0426 416086 - 415535 - | condensin subunit ScpB Synpcc7942_0427 416951 - 416103 - | ATPase Synpcc7942_0428 418610 - 416982 - | alpha-isopropylmalate/homocitrate synthase family transferase TERM 215 418659 - 418617 - R 87 -4.8 -5.24129 | overlap 418618 418619 CCTGGTCATAAAAAA TTCGCTGCTCTTCTCC CGAGTGTAGGC GGAGACGAGCAGCGGC GAGGGAGATGAACCC TERM 216 418658 - 418618 - R 72 -8.3 -3.73995 | overlap 418617 418619 CTGGTCATAAAAAAT TCGCTGCTCTTCTCC CGAGTGTAGGC GGAGACGAGCAGCGG CGAGGGAGATGAACC TERM 217 418657 - 418619 - R 75 -11.8 -2.83915 | overlap 418618 418617 TGGTCATAAAAAATT CGCTGCTCTTCTCC CGAGTGTAGGC GGAGACGAGCAGCG GCGAGGGAGATGAAC Synpcc7942_0429 419220 - 418681 - | hypothetical protein Synpcc7942_0430 419382 - 421292 + | 1-deoxy-D-xylulose-5-phosphate synthase TERM 218 421641 - 421629 - g 73 -9.1 -4.00042 | TCGCTGAGGAAACAA CCACC CAC GGTGG CTCAGTGCGGCTGGG TERM 219 422467 - 422482 + G 74 -7.5 -4.23999 | overlap 422459 422465 TTTCCAGCGCTTAGG CCGCC GGCTCG GGCGG TTCTTTTGGCTGTCG Synpcc7942_0431 421289 - 422557 + | hypothetical protein Synpcc7942_0432 422547 - 423245 + | D-alanyl-D-alanine dipeptidase-like TERM 220 424713 - 424691 - g 74 -4.8 -4.73297 | opp_overlap 424696, overlap 424692 424695 CAAGCAACAAACAAA GTGATGGATG AAG CATCCTTCAT CAAGAAAGTGCTGAT Synpcc7942_0433 423632 - 424840 + | hypothetical protein TERM 221 424897 - 424863 - f 70 -9.8 -3.18264 | overlap 424866 CGTCTCATTGATCAA GGACTGGGGCGATCGC TTA GCGATCGCCCTCGGCA GGCACCGATCGAACG TERM 222 424894 - 424866 - f 90 -14.5 -2.79098 | overlap 424863 CTCATTGATCAAGGA CTGGGGCGATCGC TTA GCGATCGCCCTCG GCAGGCACCGATCGA TERM 223 425100 - 425116 + G 79 -3.7 -5.1356 | overlap 425101 TGTTCCTGAGTTTGT TGGTAGA GGC TTTACCG TTTTTGTTGCTGGGG Synpcc7942_0434 425057 - 426064 + | hypothetical protein Synpcc7942_0435 426075 - 426830 + | hypothetical protein Synpcc7942_0436 426845 - 427150 + | hypothetical protein Synpcc7942_0437 427463 - 428029 + | putative glutathione peroxidase Synpcc7942_0438 427989 - 428495 + | hypothetical protein Synpcc7942_0439 429300 - 428611 - | Mg-protoporphyrin IX methyl transferase Synpcc7942_0440 430473 - 429346 - | N-acetylglucosamine 6-phosphate deacetylase Synpcc7942_0441 430523 - 431191 + | phosphoribosylaminoimidazole carboxylase, catalytic subunit Synpcc7942_0442 431458 - 432951 + | ammonium transporter TERM 224 432981 - 433007 + T 100 -18.8 -4.64861 | opp_overlap 432981 TGTCAATCAGCGAAA TCGTCCGCTTCC AAA GGAGGCGGACGA TTTGTTTTGGAGACC TERM 225 433007 - 432981 - T 100 -16.6 -3.71527 | opp_overlap 432981 TGTCAATCAGCGAAA TCGTCCGCTTCC AAA GGAGGCGGACGA TTTGTTTTGGAGACC Synpcc7942_0443 434317 - 433076 - | hypothetical protein Synpcc7942_0444 435040 - 434357 - | hypothetical protein Synpcc7942_0445 436438 - 435383 - | ABC-type dipeptide/oligopeptide/nickel transport systems permease components-like TERM 226 436479 - 436461 - R 100 -12.4 -5.07652 | opp_overlap 436460 436461 GCCTCCAAAATAAAA GGGAGCCC ATT GGACTCCC CTTTGACTTTAAAAC rpsN 436821 - 436519 - | 30S ribosomal protein S14 Synpcc7942_0447 437537 - 436851 - | DNA-(apurinic or apyrimidinic site) lyase / endonuclease III Synpcc7942_0448 438628 - 437534 - | hypothetical protein Synpcc7942_0449 439961 - 438675 - | seryl-tRNA synthetase Synpcc7942_0450 440295 - 440050 - | putative NifU-like protein TERM 227 440566 - 440590 + H 91 -10.8 -4.17048 | gap 1, overlap 440567 GAGAAGCTGTTTTTC G-GCCTCTAGC AATC GCTAGAGGCTC TTCTTTTGCGGAAAA TERM 228 440567 - 440588 + H 100 -14.5 -3.68435 | overlap 440566 AGAAGCTGTTTTTCG GCCTCTAGC AATC GCTAGAGGC TCTTCTTTTGCGGAA Synpcc7942_0451 440670 - 441299 + | esterase TERM 229 441326 - 441353 + T 83 -9.9 -4.07687 | opp_overlap 441326 AGCATCCAGCAAAAA GCGTAGGGATC TTGAGC GATCGCTACGC TTTTCAACACAAACT TERM 230 441353 - 441326 - T 100 -9.9 -4.75372 | opp_overlap 441326 AGCATCCAGCAAAAA GCGTAGGGATC TTGAGC GATCGCTACGC TTTTCAACACAAACT Synpcc7942_0452 441836 - 441357 - | hypothetical protein TERM 231 442463 - 442441 - g 79 -7 -4.71426 | overlap 442442 GCTCGATCAACAAAA TCAGCTGTTG CAA CAACAACTGC AGCACCGCGATTACT TERM 232 442462 - 442442 - g 72 -10.5 -3.42374 | overlap 442441 CTCGATCAACAAAAT CAGCTGTTG CAA CAACAACTG CAGCACCGCGATTAC Synpcc7942_0453 442022 - 443236 + | GAF sensor signal transduction histidine kinase cobS 443972 - 443217 - | cobalamin synthase tgt 444001 - 445155 + | queuine tRNA-ribosyltransferase Synpcc7942_0456 445209 - 445346 + | photosystem II reaction center protein K TERM 233 445411 - 445361 - f 73 -9.6 -3.69884 | opp_overlap 445372 AGACTCAACACACAA GCTTTACGCGATCGGGGAGGTGGC AAT GCCATCTCCCCGATTCTGTATATC TGCCGATTATCCAGC TERM 234 445372 - 445400 + F 100 -21.1 -3.66896 | opp_overlap 445361 ACAAGCTTTACGCGA TCGGGGAGGTGGC AAT GCCATCTCCCCGA TTCTGTATATCTGCC Synpcc7942_0457 445562 - 446179 + | hypothetical protein Synpcc7942_0458 447051 - 446215 - | carboxylesterase Synpcc7942_0459 448166 - 447057 - | glutathione-dependent formaldehyde dehydrogenase TERM 235 447627 - 447591 - G 75 -10.1 -3.83026 | opp_overlap 447593 447601, overlap 447593 GCCGCCCAGACCAAA GACCGCAACAGTCGAAC CCG GCTCGACTTTAGCGGTG TTCAGAACCGCACCG TERM 236 447625 - 447593 - G 79 -12.7 -3.5032 | opp_overlap 447593 447601, overlap 447591 CGCCCAGACCAAAGA CCGCAACAGTCGAAC CCG GCTCGACTTTAGCGG TGTTCAGAACCGCAC TERM 237 447807 - 447796 - G 74 -7.2 -4.34402 | opp_overlap 447797 447797 CCGTTGAGACTAAAA CGGC TGGT GCCG TCTGGCATTAGGCCT Synpcc7942_0460 448779 - 448306 - | putative acetyltransferase Synpcc7942_0461 449313 - 448876 - | hypothetical protein Synpcc7942_0462 449957 - 449370 - | hypothetical protein Synpcc7942_0463 450448 - 449957 - | protein tyrosine phosphatase TERM 238 450515 - 450492 - R 100 -10.2 -4.93696 | opp_overlap 450492 450491 450506 CCTAAACAGCAAAAA CGGGGAGACC TTAC GATCGCCCCG CTATCTTTCACACTA Synpcc7942_0464 450934 - 450539 - | hypothetical protein Synpcc7942_0465 451748 - 451023 - | hypothetical protein TERM 239 451849 - 451839 - gR 70 -3.2 -4.73094 | AAGATTAAGAGAAAA TGAC AAG GCCA ATCAGCAGGCAACAA TERM 240 453223 - 453251 + Gr 86 -12.4 -3.43925 | gap 1, overlap 453221 453219 CGGCGTTGGCATCAT GCCGCTACGGGCC ACTG GGCCCG-AGCTGC TCTATTTCTTGCTGC TERM 241 454038 - 454002 - gR 74 -7.9 -4.11216 | opp_overlap 454037 TTTTGATCCTGAAAA CCCTACTGCGACCGC CCATCCT GCGATCGCGGCAGCG GCCAGCCCAGCTGGG Synpcc7942_0467 454837 - 454004 - | peptidase, metallopeptidase Synpcc7942_0466 451838 - 454087 + | cellulose synthase (UDP-forming) secG 455045 - 454806 - | preprotein translocase subunit SecG TERM 242 454897 - 454909 + gr 74 -7.7 -4.12188 | GTAACGCGATTGAGC GTGCT CTC AGCAC TTTTGGCGCTCGTAA Synpcc7942_0469 456664 - 455066 - | phosphoglyceromutase TERM 243 457101 - 457088 - H 76 -3.9 -4.91109 | opp_overlap 457088 CTTGCATGAGAAAAA CATAA AGAA TTATG AGTTTTCTGATGTGG TERM 244 457167 - 457156 - H 70 -5.8 -4.17425 | ACAACTAGCTGAAAA GCTC CCCA GAGC GGAAAAGGTCGCGCT Synpcc7942_0470 457211 - 457744 + | hypothetical protein TERM 245 458331 - 458341 + G 75 -2.4 -5.0916 | CCCTTATTTGGCTTC GGCC TTT GGCA TTTTTCTGTTGCGCC Synpcc7942_0471 457882 - 458712 + | ABC-type sugar transport system permease component-like Synpcc7942_0472 458795 - 459019 + | exodeoxyribonuclease VII small subunit TERM 246 459645 - 459656 + G 71 -4.4 -4.58395 | GGGGCCAACGGCTAT CTGA TCGA TCAG TTTTTGCAGGATGGC Synpcc7942_0473 459096 - 460202 + | NADH:flavin oxidoreductase TERM 247 460258 - 460234 - T 91 -7.7 -5.14563 | opp_overlap 460234 TTGCCTAGCAAAAAA CCGCCATGGCA GAA CGCTGTGGCGG TTTTTGGTCATTCAG TERM 248 460234 - 460258 + T 100 -11.4 -4.81083 | opp_overlap 460234 TTGCCTAGCAAAAAA CCGCCATGGC AGAAC GCTGTGGCGG TTTTTGGTCATTCAG Synpcc7942_0474 460433 - 460296 - | hypothetical protein Synpcc7942_0475 460544 - 460449 - | cytochrome b6-f complex subunit PetN clpS 460552 - 460962 + | ATP-dependent Clp protease adaptor Synpcc7942_0477 461293 - 460994 - | hypothetical protein Synpcc7942_0478 461935 - 461324 - | thylakoidal processing peptidase Synpcc7942_0479 463749 - 461935 - | GTP-binding protein LepA Synpcc7942_0480 463901 - 465634 + | GAF sensor signal transduction histidine kinase Synpcc7942_0481 465713 - 466828 + | protease Synpcc7942_0482 468773 - 467004 - | peptidoglycan glycosyltransferase Synpcc7942_0483 469219 - 468776 - | hypothetical protein TERM 249 469270 - 469252 - R 74 -7.4 -4.13767 | opp_overlap 469254 GGGTTGAGGGGAAAA CACGGC CGAGTAT GCCGTG GGTTAGTCGTCTCGA Synpcc7942_0484 470874 - 469432 - | hypothetical protein Synpcc7942_0485 470975 - 472312 + | phosphoglycerate mutase Synpcc7942_0486 472319 - 473554 + | dihydroorotase Synpcc7942_0487 474172 - 473510 - | thylakoidal processing peptidase Synpcc7942_0488 474316 - 475644 + | dihydroorotase Synpcc7942_0489 477044 - 475665 - | aldehyde dehydrogenase Synpcc7942_0490 477395 - 479440 + | diguanylate cyclase with PAS/PAC sensor Synpcc7942_0491 479700 - 479837 + | hypothetical protein Synpcc7942_0492 480824 - 479877 - | bifunctional riboflavin kinase/FMN adenylyltransferase Synpcc7942_0493 480967 - 482451 + | hypothetical protein Synpcc7942_0494 482984 - 482631 - | hypothetical protein Synpcc7942_0495 483517 - 482981 - | hypothetical protein TERM 250 483557 - 483597 + r 86 -10.6 -3.89704 | overlap 483561 483573 CCCAGCTTAGCTCAC CTGAGC-GATCGCTCTGCAG CAA CTGTAGAGCGAGCTGCT-AG TTGTTGATTCTCTTC TERM 251 483561 - 483594 + r 79 -12.5 -3.00018 | gap 1, overlap 483557 483573 GCTTAGCTCACCTGA GC-GATCGCTCTGCAG CAA CTGTAGAGCGAGCTGC TAGTTGTTGATTCTC Synpcc7942_0496 484323 - 483634 - | hypothetical protein Synpcc7942_0497 484504 - 484328 - | hypothetical protein TERM 252 486198 - 486218 + G 70 -11.9 -2.52834 | overlap 486197 CTACCGCCAGTTGTT TTGCGATCG CCT CGATCGCGA CTTGCTGCTGCGATC Synpcc7942_0498 484585 - 487098 + | mannose-1-phosphate guanyltransferase Synpcc7942_0499 488370 - 487375 - | hydroxyneurosporene-O-methyltransferase Synpcc7942_0500 488823 - 488470 - | hypothetical protein Synpcc7942_0501 489483 - 488833 - | nucleoside-diphosphate-sugar epimerase-like Synpcc7942_0502 490074 - 489508 - | hypothetical protein Synpcc7942_0503 490382 - 490074 - | hypothetical protein hemA 491698 - 490382 - | glutamyl-tRNA reductase TERM 253 491815 - 491767 - R 74 -5.9 -4.57569 | overlap 491770 GGATTCGCTGAAAAA CAACGACCGAAGCGATCGAGC TATACCC GTTCTACCGCTCCGGCCGCCA TTTGGGATCAGGAAT TERM 254 491812 - 491770 - R 90 -9.8 -4.40561 | overlap 491767 TTCGCTGAAAAACAA CGACCGAAGCGATCGAGC TATACCC GTTCTACCGCTCCGGCCG CCATTTGGGATCAGG glpX 492867 - 491830 - | fructose 1,6-bisphosphatase II TERM 255 492204 - 492229 + g 71 -11.1 -3.14132 | CACCCTCGGGAGCTG CACCGATGCCC ATCA GGGCGTGGGTG TTGGTGCCAGCAAAA TERM 256 492964 - 492984 + H 70 -9.7 -3.15861 | CTCTGGCTTTAGTTG CGATCGCAG TGA CTGCTATCG TTAGTGGGGCTGGTG pyrH 492988 - 493749 + | uridylate kinase frr 493736 - 494284 + | ribosome recycling factor TERM 257 494569 - 494583 + G 81 -4.2 -5.14563 | overlap 494563 494564 494570 CTGGATGGTGCGACG CGATCG CTT CGATCA TTTTTTGGTCGAGCA Synpcc7942_0508 494291 - 495421 + | geranylgeranyl reductase Synpcc7942_0509 495460 - 495933 + | hypothetical protein TERM 258 495940 - 495956 + T 88 -12.3 -3.61715 | CCCCGTTAGTGACGA CTCCAGC GGC GCTGGAG TTCTTGGCGGACGTC Synpcc7942_0510 496580 - 495930 - | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase Synpcc7942_0511 497579 - 496602 - | ABC-type transport system involved in cytochrome c biogenesis permease component-like Synpcc7942_0512 498808 - 497624 - | hypothetical protein Synpcc7942_0513 499653 - 498901 - | ATPase Synpcc7942_0514 500105 - 499683 - | hypothetical protein Synpcc7942_0515 500565 - 500143 - | hypothetical protein TERM 259 500461 - 500441 - G 86 -7.6 -5.00884 | gap 1, overlap 500442 500443 ACGCCTTGCAAAAAA GTGCGATCG GGCT CGATCGC-C TCGTGCCACAACGCT Synpcc7942_0516 501884 - 500562 - | C-terminal processing peptidase-2 TERM 260 501934 - 501918 - R 77 -12.3 -2.79518 | overlap 501910 501917 CCAAAAGCGGGAAAC CCTAGGC TCA GCCTAGG CAAGAGCTTGGGACA Synpcc7942_0517 504333 - 502006 - | exonuclease RecJ Synpcc7942_0518 504393 - 505556 + | hypothetical protein Synpcc7942_0519 505620 - 506138 + | hypothetical protein Synpcc7942_0520 506188 - 506829 + | hypothetical protein Synpcc7942_0521 506835 - 507422 + | hypothetical protein TERM 261 507796 - 507822 + F 78 -5.2 -4.86621 | GTATTTGTGTAATGA CAGATGTTGC CTATCCA GTGACATCTG TTTTTGATTGACCCT TERM 262 508156 - 508178 + G 79 -8.5 -4.36914 | gap 1 CAATTGGATTGCTGG CCGTT-CGGT GATT ACCGTAACGG TTTTGTCGCCGGGCG Synpcc7942_0522 507941 - 508312 + | hypothetical protein Synpcc7942_0523 508703 - 508314 - | hypothetical protein Synpcc7942_0524 509202 - 508795 - | hypothetical protein aroB 510332 - 509226 - | 3-dehydroquinate synthase TERM 263 509774 - 509806 + g 73 -9 -3.96291 | opp_overlap 509768 509790 ACTTAATTACCTCAG CCATGCCGGCACGG AACTC CCGTACGGGCAGGG TTTGTAGCGTTTCTG TERM 264 510491 - 510507 + G 76 -3.5 -4.90525 | GTCTGACGGTGTTTT GGCCAGC GCT GCAAGCC TTTTATTTCAGCTTC Synpcc7942_0526 510412 - 511293 + | ABC-type sugar transport systems permease components-like TERM 265 511374 - 511357 - T 100 -9.1 -5.42131 | opp_overlap 511357 511356 CAAGCAGACAAAAAA GGTGAGC GATC GCCCACC CTTTAAAACACCTTC Synpcc7942_0527 512234 - 511398 - | hypothetical protein Synpcc7942_0528 513578 - 512589 - | lipopolysaccharide biosynthesis proteins LPS Synpcc7942_0529 513543 - 514331 + | 6-phosphogluconolactonase Synpcc7942_0530 514335 - 515288 + | 4Fe-4S cluster binding TERM 266 515639 - 515625 - g 74 -4.2 -4.7657 | GAAAAAGCGCAAAAA CTGTCG CCC CGAGAG CCTGCAATTTTGTTT Synpcc7942_0531 515313 - 516176 + | TPR repeat-containing protein TERM 267 516326 - 516339 + T 76 -9.5 -3.73302 | opp_overlap 516312 516326 AGCCCTCTGGAACAA GGGGC TTAA GCCCC TTATTGACTCTCTTG TERM 268 516339 - 516326 - T 73 -9.5 -3.61517 | opp_overlap 516326, overlap 516312 AGCCCTCTGGAACAA GGGGC TTAA GCCCC TTATTGACTCTCTTG Synpcc7942_0532 516767 - 516414 - | hypothetical protein Synpcc7942_0533 517000 - 516764 - | hypothetical protein Synpcc7942_0534 518941 - 517016 - | D-fructose-6-phosphate amidotransferase TERM 269 519050 - 519035 - R 100 -11.8 -5.30686 | AAGAGCCAGAAAAAA GGGGGC GATC GCCCCC TGAACCACAAGCCTG Synpcc7942_0535 519333 - 519088 - | photosystem I subunit VII TERM 270 519519 - 519504 - H 70 -4.7 -4.54301 | overlap 519514 CAAAAAATTAACAAA TTGCC AAGCAG GGCAA GGGATTGACCTGCGA acpP 519792 - 520034 + | acyl carrier protein Synpcc7942_0537 520102 - 521355 + | 3-oxoacyl-(acyl carrier protein) synthase II Synpcc7942_0538 521502 - 523508 + | transketolase TERM 271 523548 - 523575 + F 100 -12.8 -5.19328 | opp_overlap 523547 AAAACTTGAATTGAT TCCCCTTTCGTA AGCT TGCGGAAGGGGA TTTTTCTTATGAACT TERM 272 523790 - 523821 + G 78 -12.4 -3.53091 | gap 1 CTCACGATCGCGGTT CTGACTGGTAGTCGC CTT GCG-CTATCAGTCGG TTTGCAAGCGCCCGT Synpcc7942_0539 523604 - 524353 + | hypothetical protein TERM 273 524354 - 524383 + F 71 -2.9 -4.74132 | gap 1, overlap 524355 524376 ATTCTTCAGGGTTGA GGCCACTGAGACAA TGC TTGTTT-GGTGGCA TTTTTGCTACCATCT Synpcc7942_0540 524367 - 524828 + | hypothetical protein TERM 274 524904 - 524887 - g 70 -5.5 -4.42062 | GACGCCTGAAAGAAA TGGCTCG TCTA CGAGGCA CGACAGTAAATCGAC Synpcc7942_0541 524832 - 525062 + | hypothetical protein Synpcc7942_0542 525360 - 526253 + | lipoyl synthase Synpcc7942_0543 526813 - 526250 - | hypothetical protein TERM 275 526953 - 526943 - g 74 -4.6 -4.83615 | overlap 526944 GATGTTCTAGAAAAA CGGG CTC CCCA CCGAGAAGCGCACCT Synpcc7942_0544 526892 - 527161 + | YciI-like protein TERM 276 527182 - 527164 - g 81 -10.3 -4.09739 | TCAAGCCTTCTAAAA CGATCGC TAGCG GCGATCG CCTGGCTATCGCTAG TERM 277 527408 - 527439 + G 89 -8.6 -4.91852 | overlap 527409 527411 TTGCGATCGCCAGTT TTGGGGCGGGAGCG TTTG CGCTGCTGCCCTAC TTTGTTTTTCGTCCG TERM 278 527409 - 527438 + G 78 -12.1 -3.54027 | overlap 527408 527411 TGCGATCGCCAGTTT TGGGGCGGGAGCG TTTG CGCTGCTGCCCTA CTTTGTTTTTCGTCC TERM 279 527411 - 527436 + G 78 -12.5 -3.32572 | overlap 527409 527408 CGATCGCCAGTTTTG GGGCGGGAGCG TTTG CGCTGCTGCCC TACTTTGTTTTTCGT Synpcc7942_0545 527143 - 527835 + | hypothetical protein TERM 280 528813 - 528857 + G 79 -9.4 -4.30576 | gap 1 GGTTGCGCACGGATC TCAGCCGCCTCAATCAACCGG CACT CTGGTTCATTGGTG-GGCTGA TTTTGGTCGTGGCGA Synpcc7942_0546 527876 - 530023 + | Na+/H+ antiporter Synpcc7942_0547 530566 - 530057 - | hypothetical protein Synpcc7942_0548 531783 - 530623 - | hypothetical protein Synpcc7942_0549 531884 - 532645 + | hypothetical protein Synpcc7942_0550 532654 - 533037 + | hypothetical protein Synpcc7942_0551 533570 - 533941 + | hypothetical protein TERM 281 534000 - 533982 - f 78 -7.4 -4.33928 | opp_overlap 533982 GATTTGAAATAGAAA CCCGGT CGCAAAC ACCGGG TTTTTTTTTGTGGGG TERM 282 533982 - 534000 + F 100 -7.4 -6.22802 | opp_overlap 533982 GATTTGAAATAGAAA CCCGGT CGCAAAC ACCGGG TTTTTTTTTGTGGGG TERM 283 534384 - 534399 + G 72 -6 -4.37658 | CACCACTGCCTTTGC GGCAGC CCTA GCGGCC TTTTATCAGAAAATT Synpcc7942_0552 534067 - 535185 + | UDP-N-acetylglucosamine 2-epimerase Synpcc7942_0553 536534 - 535182 - | secretion protein HlyD Synpcc7942_0554 536594 - 537685 + | translation-associated GTPase TERM 284 537716 - 537742 + F 70 -4.3 -4.49389 | overlap 537717 GTCCCCGCCTAGTTA ACCCTCTGCTG TTGAT CGGTGGAGGGC TTTTAATTGTGCAAT Synpcc7942_0555 537790 - 538509 + | zinc metalloprotease Synpcc7942_0556 539219 - 538506 - | two component transcriptional regulator Synpcc7942_0557 539414 - 539605 + | hypothetical protein TERM 285 539947 - 539967 + G 77 -3.2 -5.14965 | gap 1, overlap 539936 TTCCCGACACCCTCG GC-ACCAGC CTGG GCGGGTCGC TTTTTTGATAAACCT Synpcc7942_0558 539683 - 540297 + | hypothetical protein hslO 541242 - 540349 - | Hsp33-like chaperonin TERM 286 541027 - 541015 - G 70 -10.5 -3.22476 | AGCATCGACCATCAA CCCCC CGA GGGGG CCAGCGCTGCGAATC Synpcc7942_0560 541979 - 541275 - | ATPase Synpcc7942_0561 542054 - 543049 + | hypothetical protein Synpcc7942_0562 543141 - 543596 + | hypothetical protein Synpcc7942_0563 545654 - 543654 - | excinuclease ABC subunit B TERM 287 544504 - 544493 - G 72 -2.2 -4.96848 | TTGCTGAGACAAAAA TGCA CTGA CGCA CTTTCTCCCAAAATT TERM 288 545026 - 545016 - G 86 -5.4 -5.1861 | TTCATCACCAAAAAA TTCG ACC CGAA TAATCCGATCCTCAT Synpcc7942_0564 545774 - 546487 + | ATPase Synpcc7942_0565 546588 - 547250 + | FHA domain-containing protein TERM 289 547470 - 547456 - g 70 -11.4 -3.01712 | GGCCTTGGCCCAATA CCTGCC GGT GGCAGG CGTGATGACCGAGAA Synpcc7942_0566 547262 - 548017 + | HAD family hydrolase Synpcc7942_0567 549368 - 548019 - | hypothetical protein Synpcc7942_0568 550687 - 549371 - | cytosine deaminase Synpcc7942_0569 551653 - 550718 - | DNA-directed RNA polymerase sigma subunit (sigma70/sigma32)-like TERM 290 551130 - 551157 + g 70 -9.8 -3.53247 | overlap 551128 551153 GCACGGCTGGGCAAT CGCTTGAGCTGA TGAG TCAGCTCTCGCG TCATTTTTTTGATGC TERM 291 551389 - 551421 + g 84 -3.3 -5.48213 | opp_overlap 551391 551398, overlap 551390 551391 GGTATTTCTTCGCAA CACTCACAACCAACC GGA GGTTGGCTTTGAGCA TTTTTGTTTTCGCTC TERM 292 551419 - 551391 - G 75 -12.5 -3.01924 | opp_overlap 551390 551389 551391, overlap 551398 TATTTCTTCGCAACA CTCACAACCAACC GGA GGTTGGCTTTGAG CATTTTTGTTTTCGC TERM 293 551412 - 551398 - G 70 -10 -3.42503 | opp_overlap 551391 551390 551389, overlap 551391 TCGCAACACTCACAA CCAACC GGA GGTTGG CTTTGAGCATTTTTG TERM 294 551846 - 551823 - R 91 -9.6 -4.61162 | ATACTAAACAAGAAA CCCCCAGAAA TGGC TCTCTGAGGG TCAACCGCGATCGCT Synpcc7942_0570 553221 - 551878 - | DNA polymerase III subunit alpha Synpcc7942_0571 554697 - 553324 - | sugar (glycoside-Pentoside-hexuronide) transporter Synpcc7942_0572 555134 - 554694 - | hypothetical protein Synpcc7942_0573 555533 - 555297 - | hypothetical protein Synpcc7942_0574 555612 - 556442 + | hypothetical protein Synpcc7942_0575 556977 - 556414 - | hypothetical protein TERM 295 557025 - 557007 - H 100 -10.2 -5.78622 | CGAGGTCAAAAAAAA GCCCCGGC AGA ACCGAGGC AGTCGATACAGAGCT thiG 557200 - 558060 + | thiazole synthase Synpcc7942_0577 558144 - 558314 + | hypothetical protein Synpcc7942_0578 558408 - 559616 + | UDP-sulfoquinovose synthase Synpcc7942_0579 559632 - 560765 + | sulfolipid sulfoquinovosyldiacylglycerol biosynthesis protein Synpcc7942_0580 562537 - 560720 - | peptidoglycan glycosyltransferase TERM 296 561750 - 561763 + g 82 -8.1 -4.59773 | ATGCTGTTGCCGATC GCAGC CTCT GCTGC TTTTTGCAGATCGAG Synpcc7942_0581 562981 - 562634 - | hypothetical protein Synpcc7942_0582 564024 - 563020 - | hypothetical protein TERM 297 563607 - 563631 + g 77 -12.2 -3.31144 | gap 1, opp_overlap 563590 563602 CGCCAAATATGTAGG GCTCTGGCAGC CCCA GCTGCC-GAGC TTGTCCAGCTAACGC Synpcc7942_0583 564123 - 565217 + | protoporphyrin IX magnesium-chelatase TERM 298 565248 - 565274 + T 91 -10.9 -4.26344 | GGATAAAGGCTGCCA CGCCTTGAAGG CTGTC TCTTCAGGGCG TTTTGATCACAGTGT TERM 299 565328 - 565306 - T 100 -13.5 -4.19817 | opp_overlap 565303 565302 565306 TTCAGCCAGCGAAAA GCCAGCTTC GATCT GAAGCTGGC TCAGTTGATTGGGTT TERM 300 565306 - 565328 + T 84 -14.2 -2.60988 | opp_overlap 565306, overlap 565303 565302 TTCAGCCAGCGAAAA GCCAGCTTCG ATC TGAAGCTGGC TCAGTTGATTGGGTT Synpcc7942_0584 566079 - 565354 - | ribose-5-phosphate isomerase A TERM 301 566137 - 566118 - R 100 -11.4 -5.26875 | GTCGCAACTAAAAAA GGCGACTG AATC CAGCCGCC TGAGTAACCTCATGT Synpcc7942_0585 567388 - 566168 - | PDZ/DHR/GLGF Synpcc7942_0586 568279 - 567539 - | hypothetical protein TERM 302 570902 - 570883 - H 81 -10.8 -3.62096 | GGGGACCAGCCTAAA CCAAACTC CACG GAGTTTGG GGTCGTGGGACAGCA TERM 303 571138 - 571127 - H 72 -7.2 -4.2354 | GAAAGGTGAAAAGAA CCCC GGAA GGGG AGTGAAATAGAACAT TERM 304 571926 - 571908 - H 70 -6 -4.21194 | CTTGAGTAGCGAAAA CATGGG TGAGAAT CCCATG CCCCGAAATCCCAAG TERM 305 573748 - 573702 - H 81 -8.7 -4.4078 | opp_overlap 573703 573705 573709, overlap 573704 573705 GGTCCCTAATCAAAA CATCTAACCCCCCTCTGCT CACTACAAC AGCGGAGGGGGGTTAGTCT TTCGATCCCTATCTA TERM 306 573703 - 573747 + H 88 -12.2 -3.6806 | opp_overlap 573702 573704 573705, overlap 573705 573709 GTCCCTAATCAAAAC ATCTAACCCCCCTCTGCT CACTACAAC AGCGGAGGGGGGTTAGTC TTTCGATCCCTATCT TERM 307 573746 - 573704 - H 100 -13.5 -3.8125 | opp_overlap 573703 573705 573709, overlap 573702 573705 TCCCTAATCAAAACA TCTAACCCCCCTCTGCT CACTACAAC AGCGGAGGGGGGTTAGT CTTTCGATCCCTATC TERM 308 573745 - 573705 - H 100 -17 -2.88268 | opp_overlap 573703 573705 573709, overlap 573704 573702 CCCTAATCAAAACAT CTAACCCCCCTCTGCT CACTACAAC AGCGGAGGGGGGTTAG TCTTTCGATCCCTAT TERM 309 573705 - 573745 + H 100 -19.2 -3.41836 | opp_overlap 573705 573704 573702, overlap 573703 573709 CCCTAATCAAAACAT CTAACCCCCCTCTGCT CACTACAAC AGCGGAGGGGGGTTAG TCTTTCGATCCCTAT TERM 310 573709 - 573741 + H 95 -14.2 -3.47029 | opp_overlap 573705 573704 573702, overlap 573705 573703 AATCAAAACATCTAA CCCCCCTCTGCT CACTACAAC AGCGGAGGGGGG TTAGTCTTTCGATCC TERM 311 576533 - 576520 - g 74 -3.1 -4.84673 | gap 1, overlap 576521 TGAAACAAGAGAAAA CCTGCT GGA AGC-GG AGAAGCAAGCAGAGC valS 573854 - 576583 + | valyl-tRNA synthetase TERM 312 576611 - 576641 + T 73 -9 -3.68936 | opp_overlap 576608 576629 GCTCCTCACAATCAA GCTGCCTTGGGT CAATAAC GCCTGAGGCAGC TTCTTGGCATTCCTC purT 577840 - 576665 - | phosphoribosylglycinamide formyltransferase 2 TERM 313 577904 - 577872 - H 88 -11.4 -3.77846 | gap 1, overlap 577875 577876 577878 CAGAACAGACGCAAA TAAG-GAGAGGGACG ATAC CGCCCCTCTCGCTCA AAAGTTTTGATTCCG TERM 314 577900 - 577875 - H 88 -11.1 -4.00587 | overlap 577872 577876 577878 AACAGACGCAAATAA GGAGAGGGACG ATAC CGCCCCTCTCG CTCAAAAGTTTTGAT TERM 315 577899 - 577876 - H 93 -14.6 -2.99268 | overlap 577875 577872 577878 ACAGACGCAAATAAG GAGAGGGACG ATAC CGCCCCTCTC GCTCAAAAGTTTTGA TERM 316 577897 - 577878 - H 75 -11.4 -3.04231 | overlap 577876 577875 577872 AGACGCAAATAAGGA GAGGGACG ATAC CGCCCCTC TCGCTCAAAAGTTTT Synpcc7942_0589 577911 - 578573 + | Fe-S-cluster oxidoreductase-like Synpcc7942_0590 578620 - 578967 + | membrane protein-like Synpcc7942_0591 578972 - 579298 + | membrane protein-like Synpcc7942_0592 580394 - 579312 - | 6-phosphofructokinase Synpcc7942_0593 581174 - 580422 - | hypothetical protein Synpcc7942_0594 582881 - 581205 - | hypothetical protein TERM 317 582465 - 582437 - GR 75 -11.8 -3.01924 | gap 1 GATCTGGCCCCAACA TGGCG-GGTGCGA TCGC TCGCACCGCACCA CTGGCCTGACTGGCA Synpcc7942_0595 583398 - 582850 - | hypothetical protein TERM 318 582940 - 582910 - GH 71 -8.9 -3.70919 | overlap 582914 GCCAAAGCCCAAGAA CTGACCAGCGGGT TGCTC ACCCGCCGGATAG GCCGTAATGCCCCAC TERM 319 582936 - 582914 - GH 76 -12.7 -2.66373 | overlap 582910 AAGCCCAAGAACTGA CCAGCGGGT TGCTC ACCCGCCGG ATAGGCCGTAATGCC Synpcc7942_0596 583496 - 584428 + | delta(24)-sterol C-methyltransferase Synpcc7942_0597 585264 - 584425 - | naphthoate synthase TERM 320 585595 - 585611 + H 77 -8.7 -4.11484 | opp_overlap 585595 585594 CTCAATTGCTGAAAT CTCTGTC TGT GACAGGG TTTTCACGAATTAAA Synpcc7942_0598 585701 - 587473 + | peptidoglycan-binding LysM TERM 321 587492 - 587521 + T 100 -14.3 -4.28254 | CTGAACGCTTCATCA GCGATCGCTTCCG TCAT CCGAGGCGATCGC TTTTACGTGTTGAGA Synpcc7942_0599 588404 - 587802 - | TetR family transcriptional regulator Synpcc7942_0600 590060 - 588528 - | serine/threonine protein kinase Synpcc7942_0601 590390 - 590130 - | hypothetical protein Synpcc7942_0602 591454 - 590846 - | hypothetical protein glgC 592751 - 591459 - | glucose-1-phosphate adenylyltransferase TERM 322 591586 - 591600 + g 74 -4.2 -4.83615 | ACGATCTGAACGTTC TGGCCA ATG TGGGCA TTTTTGTCGACGATG Synpcc7942_0604 592890 - 593633 + | ribulose-phosphate 3-epimerase TERM 323 593676 - 593703 + T 95 -10.6 -4.55798 | ATCTGAATCTTGCAG CCCTTCAGTGGA TCAG TCTGCTGAGGGG TTTTGCTTTAGGATG Synpcc7942_0605 594694 - 593711 - | hypothetical protein aat 595367 - 594687 - | leucyl/phenylalanyl-tRNA--protein transferase Synpcc7942_0607 595381 - 595707 + | hypothetical protein TERM 324 596020 - 596031 + G 71 -4.4 -4.56597 | CCCGATCGCGCTGCT CTTC GCCA GAAG TTTTTGGCAGAACAC TERM 325 596054 - 596070 + G 86 -3.7 -5.4505 | CAGAACACATCCATA GCGAA GACGAAG TTCGC TTTTTTGTTGCAGGA Synpcc7942_0608 595756 - 596298 + | hypothetical protein Synpcc7942_0609 596382 - 597872 + | proton-translocating NADH-quinone oxidoreductase, chain M TERM 326 598685 - 598664 - g 71 -12.3 -2.75481 | overlap 598666 GCGCAACTCGAAGCA CAGCAACGG GTTC CCGCTGCTG TCCCAGAGCCATCCA Synpcc7942_0610 597977 - 599776 + | hypothetical protein Synpcc7942_0611 599815 - 602205 + | recombination and DNA strand exchange inhibitor protein TERM 327 602231 - 602249 + T 70 -11 -2.8001 | opp_overlap 602216 602218 602231 602232 GATTCGATCGCCAAA TCCCGATC GGC GATCGGGG TGTAGTCGAGGTTGT TERM 328 602248 - 602232 - T 77 -12.3 -2.74263 | opp_overlap 602231, overlap 602218 602231 ATTCGATCGCCAAAT CCCGATC GGC GATCGGG GTGTAGTCGAGGTTG Synpcc7942_0612 603369 - 602209 - | methylcitrate synthase Synpcc7942_0613 603992 - 603504 - | phosphohistidine phosphatase, SixA Synpcc7942_0614 605675 - 603996 - | hypothetical protein Synpcc7942_0615 605836 - 606180 + | rhodanese-like protein TERM 329 606799 - 606809 + G 70 -5.4 -4.42386 | GATCGCCAATTGCTA TTGC TCA GCAA TTTTCTCAATCAAGA TERM 330 607279 - 607242 - g 74 -7.7 -4.2558 | gap 1, overlap 607243 607246 CATGCTCTACGAAAA TGCAGTAGC-AGCGGTGG AAG CCACCGCCAGCTACCTGA GTGAGGCGATCGCCT TERM 331 607275 - 607246 - g 81 -15.1 -2.77781 | gap 1, overlap 607242 607243 CTCTACGAAAATGCA GTAGC-AGCGGTGG AAG CCACCGCCAGCTAC CTGAGTGAGGCGATC hrcA 606238 - 607299 + | heat-inducible transcription repressor Synpcc7942_0617 607688 - 607311 - | hypothetical protein Synpcc7942_0618 607820 - 609100 + | S-adenosyl-L-homocysteine hydrolase Synpcc7942_0619 609153 - 609788 + | hypothetical protein Synpcc7942_0620 609866 - 610570 + | hypothetical protein TERM 332 610984 - 611004 + G 83 -9 -4.67048 | gap 1, opp_overlap 610973, overlap 610986 610987 TCAACGCCAACCGCT GCTCACCGC GATC GCGGTG-GC TTTCTTTTGGGCTGA Synpcc7942_0621 610715 - 611893 + | hypothetical protein TERM 333 612404 - 612392 - g 75 -9.1 -4.08557 | opp_overlap 612381 612379 GTCGCCAAAGAACAA GCCAG CTT CTGGC AGTTCCTTGGTATTT Synpcc7942_0622 611915 - 613912 + | ATPase Synpcc7942_0623 613972 - 615351 + | thioredoxin reductase Synpcc7942_0624 615361 - 616419 + | light dependent period TERM 334 616905 - 616885 - g 86 -11.1 -4.07568 | CCGGCGTTGGGAAAA CCACTGCCC TGC GGGAAGTGG CACGGGTGCTGGCCG TERM 335 617221 - 617207 - g 74 -4.2 -4.75404 | opp_overlap 617208, overlap 617208 AAACCTGATCAAAAA CCCGAC GCT GTCAGA TTTGGTCGGAGGCAT Synpcc7942_0625 616419 - 618185 + | single-stranded nucleic acid binding R3H Synpcc7942_0626 618362 - 620221 + | dihydroxy-acid dehydratase Synpcc7942_0627 620462 - 621226 + | hypothetical protein TERM 336 621691 - 621705 + G 77 -10 -3.86897 | opp_overlap 621690 621689 CTCAACGTCAAAATT GGCGAT GGC ATCGCC TTTGTCCAGACTGCG Synpcc7942_0628 621277 - 622137 + | spermidine synthase Synpcc7942_0629 622340 - 622134 - | hypothetical protein Synpcc7942_0630 622432 - 623574 + | hypothetical protein TERM 337 623808 - 623787 - T 100 -14.5 -4.90013 | opp_overlap 623787 CAATCCAATCAAAAA GGGACTTGG AAAA CCAAGTCCC TTTCTTTTGTGCAGA TERM 338 623787 - 623808 + T 100 -14.5 -4.77173 | opp_overlap 623787 CAATCCAATCAAAAA GGGACTTGG AAAA CCAAGTCCC TTTCTTTTGTGCAGA TERM 339 623869 - 623836 - T 78 -8.9 -4.28762 | overlap 623837 AGAAGTTGAGTAAAA CGGCTTGAAGACAGA GAGT CCTGCCTTCAAGCTA CTCGAACTACTTGAC TERM 340 623868 - 623837 - T 70 -10.2 -3.16534 | overlap 623836 GAAGTTGAGTAAAAC GGCTTGAAGACAGA GAGT CCTGCCTTCAAGCT ACTCGAACTACTTGA rplL 624262 - 623876 - | 50S ribosomal protein L7/L12 rplJ 624849 - 624322 - | 50S ribosomal protein L10 TERM 341 624932 - 624907 - R 100 -11.2 -5.4505 | TCTTGCAACAAAAAA GCTCCGGCAA ATTCGG TTGCCAGAGC GAAATAGATCAACAG rplA 625791 - 625078 - | 50S ribosomal protein L1 TERM 342 625367 - 625355 - G 70 -5.5 -4.4261 | opp_overlap 625355, overlap 625349 TGTTCAAGATCAAAA GTGAC TGT GCCAC CTTTGGGCGAGGGCA rplK 626291 - 625866 - | 50S ribosomal protein L11 TERM 343 626235 - 626262 + g 83 -15 -3.18264 | CACGGGAGGCGCCGG GTTAGCTTTGCC AGCG GGCAAGGCTAAC TTAATCAGTGCAACG nusG 626916 - 626299 - | transcription antitermination protein NusG secE 627170 - 626925 - | preprotein translocase subunit SecE Synpcc7942_0637 629962 - 627275 - | ATPase Synpcc7942_0638 630463 - 630050 - | glyoxalase I eno 630677 - 631969 + | phosphopyruvate hydratase TERM 344 631987 - 632038 + F 83 -5.8 -4.93547 | gap 1, overlap 631990 632001 GCTGCCTCTCGCCAC CACGGATGGCAATTGGAGCGATCTC TTG GGGGTCGCTCCTCTGTTCATCC-TG TTTTTGATTGCTTGC TERM 345 631990 - 632036 + F 77 -8.6 -4.07912 | overlap 631987 632001 GCCTCTCGCCACCAC GGATGGCAATTGGAGCGATCTC TTG GGGGTCGCTCCTCTGTTCATCC TGTTTTTGATTGCTT TERM 346 632001 - 632025 + F 89 -14.3 -3.15809 | overlap 631990 631987 CCACGGATGGCAATT GGAGCGATCTC TTG GGGGTCGCTCC TCTGTTCATCCTGTT Synpcc7942_0640 632225 - 633991 + | ATPase sdhA 635996 - 634089 - | succinate dehydrogenase flavoprotein subunit TERM 347 635083 - 635099 + g 71 -12.3 -2.82623 | overlap 635080 TCGGGGATTTGATCC GGCGATC GCC GATCGCC TGCTTGTACCGGAAC TERM 348 635250 - 635232 - G 72 -2.2 -5.00616 | overlap 635233 GGGGTTGGCAAAAAA TGCGCCCC GTC GATGCGCC CGCCAAGTCGCTGAA TERM 349 635549 - 635533 - G 74 -4.3 -4.82901 | CCCCGTGCATAAAAA GTCCGCG AGA CGAGAAC ACCGCCGAAGGTGCG Synpcc7942_0642 636670 - 636125 - | bacterioferritin comigratory protein TERM 350 636762 - 636740 - H 70 -4 -4.70169 | overlap 636741 CTAGACTGAACAAAA CGGCGTTAGC TCA GCGAACTCCA TGCCTGCAATTCAAC Synpcc7942_0643 636762 - 636965 + | hypothetical protein TERM 351 637051 - 637066 + F 70 -6.1 -4.24948 | opp_overlap 637042 637050 637051 TTAAATGACTAAAAG CCTGC TAAATC GCAGG TTTTGCCTATGCTGG TERM 352 638309 - 638321 + G 72 -10.5 -3.53012 | GTACGTTGCTGCGCT GGGCC TTT GGCCC TTTGACCGAGCGGCA TERM 353 638514 - 638503 - g 72 -3.6 -4.7254 | ACCCTGCAGGAAAAA GCCC GTTT AGGC GAGATTCAGCTCATG Synpcc7942_0644 637075 - 639339 + | GAF sensor hybrid histidine kinase TERM 354 639539 - 639520 - g 79 -7.8 -4.57569 | opp_overlap 639524 GCAGCGGCTCAAAAA CTGATGCC GGGT GGCGTCAG TTCGCCGGTGCGCGC TERM 355 640257 - 640239 - g 71 -4.4 -4.63218 | TGGCGTGCAAGAAAA GTTTGGCG TTA CGCCTGAC CTGACCACCTTGGGC Synpcc7942_0645 639397 - 640758 + | glutamate-1-semialdehyde aminotransferase TERM 356 640795 - 640829 + G 85 -12.9 -3.83026 | CGGTTGCTGTCAGAG GGATTGCTCTTGGCC CAAGC GGCTGGGGGCAATCC TTTGGTGTCGCAGCG Synpcc7942_0646 640765 - 640992 + | hypothetical protein Synpcc7942_0647 641196 - 641738 + | hypothetical protein Synpcc7942_0648 641843 - 642694 + | hypothetical protein TERM 357 642733 - 642709 - T 100 -12.9 -5.4756 | opp_overlap 642709 AATGCTAATAAAAAA GCTGCCCAAGA CTA TCTCGAGCAGC TTGTTAATTCACTGA TERM 358 642709 - 642733 + T 72 -8.5 -3.82604 | opp_overlap 642709 AATGCTAATAAAAAA GCTGCCCAAGA CTA TCTCGAGCAGC TTGTTAATTCACTGA Synpcc7942_0649 643966 - 642767 - | RNA polymerase sigma factor RpoD Synpcc7942_0650 644659 - 644174 - | hypothetical protein TERM 359 645564 - 645516 - g 77 -9.7 -3.90744 | opp_overlap 645516 645547, overlap 645517 GTGGGCTGCAAACAA CCGACTTGAGCGCGG-ATCAGCC TCGCC AGCTGACACCG-GCTCAAGCCGC TGCCTTGGCTCAAAT TERM 360 645563 - 645517 - g 75 -13.2 -2.94232 | opp_overlap 645516 645547, overlap 645516 TGGGCTGCAAACAAC CGACTTGAGCGCGG-ATCAGCC TCGCC AGCTGACACCG-GCTCAAGCCG CTGCCTTGGCTCAAA TERM 361 646252 - 646264 + G 71 -4.7 -4.53602 | CTTTATCCATCGGCG GGGGC ACA GCACC TTTGTTTCCTGTCGC TERM 362 646576 - 646550 - g 72 -3.7 -4.7373 | gap 1, overlap 646552 GGAGGCCATCAAAAA GTGCT-CGATCA ATTT CGATCGCAGCCC GCCAGTTTATTGGTG Synpcc7942_0651 644741 - 647161 + | primosome assembly protein PriA Synpcc7942_0652 648713 - 647124 - | hypothetical protein TERM 363 647327 - 647307 - G 87 -9.7 -4.62872 | overlap 647297 ACTAAGCTGCAAAAA TTGCGGCAG CCA CTGCAGCAA GGGTTGAAGTCCCAG TERM 364 648060 - 648007 - G 76 -5.1 -4.78326 | gap 1, overlap 648008 648009 648053 CGCGAAACAAACAAA TCGCCGCGATCGCTGGCGGGGAAGCC CTG GGCACAGCCACCAACAA-CGAGGCAA ATGGCATCGGGTTTT Synpcc7942_0653 649441 - 648710 - | peptidyl-prolyl cis-trans isomerase Synpcc7942_0654 650009 - 649443 - | photosystem I assembly protein Ycf4 Synpcc7942_0655 650232 - 651290 + | photosystem II D2 protein (photosystem q(a) protein) Synpcc7942_0656 651274 - 652659 + | photosystem II 44 kDa subunit reaction center protein TERM 365 652689 - 652722 + T 79 -12.5 -2.98942 | opp_overlap 652696, overlap 652696 CATTAGCCTCAAAGT CTGAAAAGCCCTTGC CTCG GCAGGGGCTTTTTCG TATCTCTGGGGGAAT TERM 366 652696 - 652715 + T 100 -11.4 -4.86133 | opp_overlap 652696, overlap 652689 CTCAAAGTCTGAAAA GCCCTTGC CTCG GCAGGGGC TTTTTCGTATCTCTG TERM 367 652715 - 652696 - T 82 -9.2 -4.17089 | opp_overlap 652689 652696 CTCAAAGTCTGAAAA GCCCTTGC CTCG GCAGGGGC TTTTTCGTATCTCTG TERM 368 652987 - 652968 - T 100 -12.1 -5.41746 | AATTGGCCAAAAAAA GGCGGCC TAGAAG GGCCGCC AGAGGCTAAGGAGAG Synpcc7942_0657 653388 - 653047 - | hypothetical protein Synpcc7942_0658 653770 - 653558 - | hypothetical protein TERM 369 653877 - 653895 + r 73 -11.8 -2.57931 | overlap 653876 653880 TGCTGTCTTCTGGGG CAAGCCAA GGG TTGGCTTG ATTCTCAAAGCTGAG Synpcc7942_0659 655275 - 653854 - | Rad3-related DNA helicases-like TERM 370 656209 - 656174 - g 75 -11 -3.38314 | opp_overlap 656200, overlap 656172 TGGAACGCCTAAAGA CTGCGATCGCCGCCGC CGAT GAACCGGCGATCGCCG CAATCCTGCAGCAAA Synpcc7942_0660 655282 - 656253 + | arogenate dehydrogenase Synpcc7942_0661 656270 - 657874 + | hypothetical protein Synpcc7942_0662 657943 - 658857 + | hypothetical protein Synpcc7942_0663 658977 - 660875 + | putative adenylate/guanylate cyclase Synpcc7942_0664 660875 - 662224 + | cyclic nucleotide-binding Synpcc7942_0665 662978 - 662232 - | hypothetical protein Synpcc7942_0666 663141 - 663761 + | heat shock protein DnaJ-like Synpcc7942_0667 663985 - 664296 + | hypothetical protein Synpcc7942_0668 664446 - 664306 - | hypothetical protein Synpcc7942_0669 664540 - 665124 + | DNA-3-methyladenine glycosylase pyrB 665121 - 666137 + | aspartate carbamoyltransferase catalytic subunit Synpcc7942_0671 666156 - 666653 + | hypothetical protein TERM 371 666854 - 666821 - f 86 -11.1 -3.85785 | overlap 666816 CAAAAATTAAGACAA CTTCACCAGCCAGAA CCGC TTCTGACTGGCCAAG GCTCGTCGTCCACCG TERM 372 667429 - 667413 - g 70 -3 -4.79657 | gap 1, overlap 667415 ACAAGATCAAGAAAA TG-CAGC GTCA GCTGTCA CAGCAGCTAGGTCGC TERM 373 667457 - 667435 - g 75 -13.4 -2.62616 | TCAGCTGTCACAGCA GCTAGGTCGC ACG GCGACCTTGC CGGAACTTGCTGCGG Synpcc7942_0672 666887 - 667849 + | RNA polymerase sigma factor SigD Synpcc7942_0673 667849 - 668931 + | A/G-specific DNA-adenine glycosylase Synpcc7942_0674 669347 - 670300 + | coproporphyrinogen III oxidase Synpcc7942_0675 670818 - 670297 - | hypothetical protein TERM 374 671414 - 671430 + G 73 -5.1 -4.56358 | opp_overlap 671410 671427, overlap 671415 GGATTTACAGAGCCG AGGCTTT GCC AAAGCCA TTTTCTGTGGCTATC Synpcc7942_0676 670914 - 672119 + | hypothetical protein Synpcc7942_0677 672462 - 672082 - | PadR family transcriptional regulator Synpcc7942_0678 672767 - 673402 + | 3'-5' exonuclease Synpcc7942_0679 673785 - 674108 + | RNA-binding region RNP-1 TERM 375 674197 - 674218 + F 100 -11.7 -5.37865 | CAGTTTTAATCCGAA GCTTAGACA TCTT TGTCTAAGC TTTTTTAATTGTTAA TERM 376 674809 - 674829 + G 82 -2.5 -5.45802 | overlap 674804 674812 AAGCAGTGATGCAGG CACTGCTGA TTA TTGGCATTG TTTTTGTTTTCCCAG TERM 377 674812 - 674826 + G 70 -2.8 -4.80077 | overlap 674804 674809 CAGTGATGCAGGCAC TGCTGA TTA TTGGCA TTGTTTTTGTTTTCC Synpcc7942_0680 674334 - 675149 + | C-5 sterol desaturase ispD 675862 - 675164 - | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Synpcc7942_0682 675946 - 676905 + | hypothetical protein Synpcc7942_0683 676942 - 677967 + | potassium channel protein Synpcc7942_0684 678025 - 678774 + | 3-oxoacyl-[acyl-carrier-protein] reductase TERM 378 679816 - 679790 - g 74 -10.8 -3.62597 | GTCATTTCCGAAGAA GTCGGCCTCAGC TTG GCCGATGCCAAC AGCAGCGTCCTCGGC groEL 678881 - 680548 + | chaperonin GroEL TERM 379 680842 - 680852 + F 81 -6.8 -4.60041 | TTCGATACCCCTCAA GCAG CCG CTGC TTTTTCGGAGTCGGT Synpcc7942_0686 680978 - 682138 + | FO synthase subunit 2 TERM 380 682238 - 682256 + GF 83 -12.4 -3.29471 | GATCGCGGGGGTTGT GCTGGCGG TTA CCGTCAGC TTGCTGTGGTGGCAA Synpcc7942_0687 682128 - 683747 + | hypothetical protein Synpcc7942_0688 683722 - 684060 + | ArsR family transcriptional regulator Synpcc7942_0689 684884 - 684051 - | hypothetical protein TERM 381 684471 - 684450 - G 70 -10.1 -3.53224 | overlap 684437 684435 CAGCTCCTCGGCAAA GCCGACGGC AGTG GCCATCAGC AGTCCTTCGAAGAAC TERM 382 684506 - 684489 - G 77 -9.8 -3.9461 | opp_overlap 684500 TCCTTCGAAGAACAA CCGCCC AAACTG GGGCGG CCAACCCTGCCACTG clpS 685155 - 684868 - | ATP-dependent Clp protease adaptor protein ClpS Synpcc7942_0691 685290 - 685634 + | hypothetical protein Synpcc7942_0692 686185 - 685631 - | hypothetical protein Synpcc7942_0693 687080 - 686247 - | hypothetical protein TERM 383 687104 - 687086 - R 100 -9.5 -5.60993 | opp_overlap 687086 687102 GTCTCCACAAAAAAA CCGGACC TGAGC GGCCCGG TTCTCTTCAGCAGCA Synpcc7942_0694 688056 - 687133 - | 30S ribosomal protein S1 Synpcc7942_0695 688840 - 688334 - | transcriptional regulator NrdR psbT 689145 - 689050 - | photosystem II reaction center protein T Synpcc7942_0697 690748 - 689222 - | photosystem II core light harvesting protein TERM 384 690651 - 690619 - G 74 -4.2 -4.8269 | gap 1, overlap 690620 CAGAAGGATCAAAAA TGGCAAGTTCGTATA AAGC CAT-CGAACCTGCCC AACCTGCCACGAGGG Synpcc7942_0698 691085 - 691519 + | ferredoxin TERM 385 691661 - 691678 + G 72 -4.1 -4.78107 | gap 1, overlap 691662 691663 GCCAGTCTGCTGTTT G-TGCTCG TGC CGAGCGTC TTTTTGATCGTCCTG Synpcc7942_0699 691619 - 691726 + | photosystem II reaction center protein M TERM 386 691791 - 691770 - T 100 -13.7 -4.14739 | opp_overlap 691770 TGAGTCATTTTAAAA GCCCGACGA ATTT TCGCCGGGC TTTGTCTTGTTAAAT TERM 387 691770 - 691791 + T 95 -11.5 -4.34866 | opp_overlap 691770 TGAGTCATTTTAAAA GCCCGACGA ATTT TCGCCGGGC TTTGTCTTGTTAAAT Synpcc7942_0700 692744 - 691824 - | hypothetical protein TERM 388 692475 - 692495 + g 80 -11.1 -3.74713 | opp_overlap 692471 GAGGGACTGAACGGC GGTGGCGAG TAG CTTGCCGCC TTCTTCCCATTTTTG Synpcc7942_0701 692799 - 693260 + | hypothetical protein Synpcc7942_0702 693257 - 694045 + | hypothetical protein Synpcc7942_0703 694072 - 695280 + | DNA processing protein DprA, putative Synpcc7942_0704 695313 - 695948 + | chloramphenicol O-acetyltransferase Synpcc7942_0705 695935 - 696570 + | hypothetical protein Synpcc7942_0706 697191 - 696577 - | precorrin-6B methylase Synpcc7942_0707 698641 - 697172 - | arginine decarboxylase TERM 389 697340 - 697330 - G 77 -8.2 -4.2828 | CGCCAGGCAGCAAAA CGGG AAT CCCG GGCGGGTAGGGGCAG TERM 390 697368 - 697384 + g 77 -12.3 -3.27022 | CAGACACATTCTGCC GCGATCG CGC CGATCGC TTGCTCTGCACTGAC Synpcc7942_0708 698708 - 700459 + | hypothetical protein Synpcc7942_0709 700511 - 700840 + | hypothetical protein Synpcc7942_0710 701538 - 700843 - | hypothetical protein TERM 391 701081 - 701101 + g 78 -4.7 -4.91459 | overlap 701063 ATCGCGCGTTCATCA GCTGCGA TCGCTTC TTGCAGC TTTTTCTCGCTGTTG carB 701604 - 704897 + | carbamoyl phosphate synthase large subunit TERM 392 705025 - 704994 - T 100 -23.2 -4.79667 | opp_overlap 704996 AAAATCGATCAAAAA GAGGGACGAGTTGC GATC GCAACTCGTCCCTC TCATCACTGCAGCAT TERM 393 704996 - 705023 + T 100 -20 -2.80816 | opp_overlap 704994 AATCGATCAAAAAGA GGGACGAGTTGC GATC GCAACTCGTCCC TCTCATCACTGCAGC Synpcc7942_0712 706350 - 705073 - | C-terminal processing peptidase-2 TERM 394 705747 - 705764 + g 76 -7 -4.55295 | overlap 705735 CAATCCGTTCCCGCA CGATCG GGAAGG CGATCG TTTCTTTCTCGCGGC ispG 707673 - 706450 - | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase Synpcc7942_0714 709450 - 707744 - | cell wall hydrolase/autolysin TERM 395 709602 - 709570 - H 100 -9.1 -5.62045 | overlap 709574 ACAGATAACAAAAAA CGAACCCCTATCACC ATT GATGACAGGGGTAAG AAAGAATGCGGAACC TERM 396 709598 - 709574 - H 100 -12.9 -4.05512 | overlap 709570 ATAACAAAAAACGAA CCCCTATCACC ATT GATGACAGGGG TAAGAAAGAATGCGG TERM 397 710177 - 710189 + G 81 -4.8 -5.05782 | opp_overlap 710177 CGAGCTCGTTAATCA GCTG CGCGC CAGC TTTTTTGCGATCGGT Synpcc7942_0715 709992 - 711179 + | UDP-N-acetylglucosamine 1-carboxyvinyltransferase TERM 398 711323 - 711349 + F 100 -10.1 -5.09259 | opp_overlap 711323 CATCACTCAATCAAA CCCCCTTGAAG CCAGT CTCCGAGGGGG TTTTGTTTTGCAGTG TERM 399 711349 - 711323 - f 81 -10.1 -3.94002 | opp_overlap 711323 CATCACTCAATCAAA CCCCCTTGAAG CCAGT CTCCGAGGGGG TTTTGTTTTGCAGTG Synpcc7942_0716 711446 - 712546 + | hypothetical protein Synpcc7942_0717 713651 - 713127 - | dCTP deaminase Synpcc7942_0718 714331 - 713678 - | hypothetical protein Synpcc7942_0719 714831 - 714328 - | hypothetical protein Synpcc7942_0720 715389 - 715051 - | hypothetical protein Synpcc7942_0721 715882 - 715592 - | hypothetical protein Synpcc7942_0722 717025 - 715943 - | hypothetical protein TERM 400 717122 - 717097 - R 86 -4.1 -5.35459 | gap 1, overlap 717098 AGAGATTACAAAAAA TTGTTCAAGCTT CCC AAGCT-GAACAT CGTCAGGAGTACCCA Synpcc7942_0723 717963 - 717322 - | hypothetical protein Synpcc7942_0724 718004 - 718447 + | hypothetical protein TERM 401 718444 - 718426 - f 100 -7.4 -5.81032 | GAACCGCAAAAAAAA TCCCGC TTCGACG GCGGGA TGAGACGTGTGATGT TERM 402 718644 - 718603 - f 80 -11.8 -3.30903 | gap 2, opp_overlap 718610, overlap 718610 AAAATTTTGGGACAA GCGAAA-AGCCGG-CTCCCT ACCA AAGAAGACCGGCTCTTTCGC TGACGAACTAATGGG TERM 403 718636 - 718610 - f 75 -7.3 -4.3208 | gap 1, opp_overlap 718610, overlap 718603 TGGGACAAGCGAAAA GCCGG-CTCCCT ACCA AAGAAGACCGGC TCTTTCGCTGACGAA Synpcc7942_0725 718666 - 720075 + | DEAD/DEAH box helicase-like Synpcc7942_0726 720068 - 720430 + | hypothetical protein TERM 404 720541 - 720563 + G 74 -12 -3.06915 | opp_overlap 720527 GCCCCTGCCCCTGCT GCGGTGGTGA GAC TCGCTACCGC TTCGATGACCTCGAT TERM 405 720831 - 720821 - g 84 -6.8 -4.96848 | GCCCGGACAGAAAAA GTCG ATT CGAC CCTGTCGCTGGAACG Synpcc7942_0727 720423 - 722966 + | hypothetical protein TERM 406 722991 - 723027 + F 100 -11.7 -4.65747 | gap 1 TATCAACCACCGTAA GCCCCCAAAAGCCTTG CAGCGA CTA-GCTTTTGGGGGC TTTTCTTACGACTTA TERM 407 723284 - 723254 - g 90 -11.9 -4.21936 | GCTAGAATGCGAAAA GCCCCAGACGAGC GGCGA ACTCATCTAGGGC GATCGGTGTTCCGGA Synpcc7942_0728 723236 - 723781 + | hypothetical protein TERM 408 724048 - 724060 + G 74 -7.7 -4.31379 | AAGCGGCCCCTACTC CGTCA CCC TGACG TTTTCATCGGTTCGT Synpcc7942_0729 723806 - 724411 + | hypothetical protein TERM 409 724402 - 724413 + F 70 -5.8 -4.24342 | CTTCAGACTTGCCAA GCTC GCTT GAGC TTTCTTGCTACCCGC Synpcc7942_0730 724626 - 725165 + | hypothetical protein TERM 410 725239 - 725225 - f 100 -12.8 -5.14563 | opp_overlap 725222 TTTGGCATCAAAAAA GGGGCC GCC GGCCCC GACCTTTCGTTGATT TERM 411 725807 - 725833 + G 72 -10.9 -3.39895 | gap 1, opp_overlap 725807 GTGGACATCGCTAAA CGGTT-CAGCCG GCAA CGGCTGCAGCCG TTGATTGATGAGACG Synpcc7942_0731 725474 - 727354 + | putative phage terminase large subunit TERM 412 727384 - 727411 + F 84 -4 -5.252 | overlap 727390 727392 CCACTTTTTTTGAGG CTATGACTGGCC TTGA GGCCTGTTTTGG TTTTTTGTCGCCGTC TERM 413 727390 - 727405 + F 83 -6 -4.90477 | overlap 727384 727392 TTTTTGAGGCTATGA CTGGCC TTGA GGCCTG TTTTGGTTTTTTGTC TERM 414 727392 - 727403 + F 70 -7.2 -4.03001 | overlap 727390 727384 TTTGAGGCTATGACT GGCC TTGA GGCC TGTTTTGGTTTTTTG Synpcc7942_0732 727482 - 727691 + | hypothetical protein Synpcc7942_0733 727691 - 729154 + | Phage portal protein, lambda TERM 415 730253 - 730228 - g 74 -4.6 -4.74215 | overlap 730230 ATATCACCAACAAAA CTCTGGCTCG AGGCTA CGAGCAAGCG CCTCAAACCTGGGCT Synpcc7942_0734 729177 - 731051 + | hypothetical protein Synpcc7942_0735 731099 - 731428 + | hypothetical protein Synpcc7942_0736 731434 - 731745 + | electron transfer protein Synpcc7942_0737 731738 - 732376 + | hypothetical protein Synpcc7942_0738 732710 - 733270 + | Phage baseplate assembly protein V Synpcc7942_0739 733536 - 733880 + | hypothetical protein Synpcc7942_0740 733877 - 734716 + | GPJ of phage P2-like Synpcc7942_0741 734713 - 735552 + | Phage tail protein I Synpcc7942_0742 735651 - 736136 + | hypothetical protein Synpcc7942_0743 736140 - 738155 + | hypothetical protein TERM 416 739280 - 739293 + G 71 -4.5 -4.56597 | GCCGACCCTGTTCGC TGGCT CACA GGCCA TTTTTGGGCGGCAGG Synpcc7942_0744 738159 - 739610 + | hypothetical protein Synpcc7942_0745 739615 - 740778 + | hypothetical protein Synpcc7942_0746 740782 - 741288 + | hypothetical protein TERM 417 741309 - 741319 + F 86 -6.8 -5.00138 | CAACTGCCAAAGGTT CTGG ACT CCAG TTTTTAATTTGAATC Synpcc7942_0747 741396 - 742820 + | hypothetical protein Synpcc7942_0748 742817 - 743320 + | Phage major tail tube protein Synpcc7942_0749 743324 - 743614 + | hypothetical protein TERM 418 743868 - 743886 + G 81 -10.3 -4.11484 | opp_overlap 743884 AGACAGGCTTTATGG GCGTCGT GCGCA ACGACGC TTTTCAGGCGTTGGC TERM 419 746382 - 746417 + G 86 -14 -3.60296 | opp_overlap 746376 AGGTCAATAGCACAC CCACGATCGCCGCG CCGATGCC CGCGCCGGTCGTGG TTTCGCCTGCGCCTC Synpcc7942_0750 743738 - 746590 + | Phage tail tape measure protein TP901, core region Synpcc7942_0751 746590 - 747510 + | hypothetical protein Synpcc7942_0752 747510 - 747722 + | hypothetical protein TERM 420 748499 - 748479 - g 70 -10.3 -3.22653 | overlap 748465 748477 AGCAGCTCTACAAGA CCCGCGACG AAG CGCAGCGGG CAGCGGACTCGCGGC Synpcc7942_0753 747719 - 749161 + | phage late control gene D protein GPD Synpcc7942_0754 749431 - 749183 - | hypothetical protein Synpcc7942_0755 749431 - 750009 + | hypothetical protein Synpcc7942_0756 750406 - 750870 + | chain A, D20c mutant of T4 lysozyme Synpcc7942_0757 751277 - 751957 + | hypothetical protein Synpcc7942_0758 751959 - 752381 + | hypothetical protein TERM 421 752772 - 752753 - g 79 -9.4 -4.25283 | opp_overlap 752753 ACTTCTTGACCAAAA TGCTATTG ACAT CAATAGCA TTATTAAACTGATTC Synpcc7942_0759 752574 - 753953 + | hypothetical protein Synpcc7942_0760 753963 - 754553 + | hypothetical protein TERM 422 754561 - 754578 + T 73 -3.5 -4.77173 | gap 1 TTTGGTAAGTTTTTT GTTCTGGA AGA TCCA-AAC TTTATTTTATGCAAA Synpcc7942_0761 755507 - 754779 - | hypothetical protein Synpcc7942_0762 756561 - 756010 - | hypothetical protein TERM 423 756618 - 756628 + r 79 -4 -5.14645 | AGGATTAGCTTGTTA TAGA AGT TCTA TTTTTCTTGACTTAT TERM 424 756863 - 756852 - R 71 -2.2 -4.88736 | TAGTAGTCATAAAAA CACT AGAA AGCG ATTTGAAAGCACCTC TERM 425 756902 - 756892 - R 88 -2.4 -5.4833 | TCATCTAACAAAAAA GCCC CTC GGTC TACACTTGGGGCTTT Synpcc7942_0763 757318 - 756989 - | XRE family transcriptional regulator Synpcc7942_0764 757595 - 757356 - | XRE family transcriptional regulator TERM 426 758025 - 757990 - g 70 -9.8 -3.52102 | gap 1, opp_overlap 758007, overlap 757994 ACTCTAGGCATAGAA GAAAGGCGACCCCGCCT GGT AAGCAAG-CCGCCTTTC TTGTCCTTTCGAACA TERM 427 758005 - 757994 - g 77 -7.2 -4.39998 | overlap 757990 TAGGCATAGAAGAAA GGCG ACCC CGCC TGGTAAGCAAGCCGC Synpcc7942_0765 757839 - 758327 + | hypothetical protein TERM 428 758753 - 758735 - g 78 -5.9 -4.72986 | GAGCGCGATCAAAAA GCCCTGC CCACT GCAGCGC TGCCCACCTCGCAGC Synpcc7942_0766 758390 - 759037 + | DNA-damage-inducible protein TERM 429 759261 - 759278 + F 81 -10.5 -3.646 | opp_overlap 759240 CAGCAGTGATCACTA GCCCTGC CTCG GCGGGGC TTGTCTGTCCTTGCC Synpcc7942_0767 759413 - 759847 + | hypothetical protein TERM 430 760032 - 759996 - f 70 -4.4 -4.46212 | gap 1, opp_overlap 760001, overlap 760001 TTGCCCATCACAAAA CGAAAGCCGCT-TTGGG TCAG CCCTAGAGCGGCTTTTT GCTGTCTACCGACGC TERM 431 760001 - 760027 + F 100 -12.3 -4.84527 | opp_overlap 759996 760001 CATCACAAAACGAAA GCCGCTTTGGG TCAGC CCTAGAGCGGC TTTTTGCTGTCTACC TERM 432 760027 - 760001 - f 78 -8.7 -4.28487 | gap 1, opp_overlap 760001, overlap 759996 CATCACAAAACGAAA GCCGCT-TTGGG TCAG CCCTAGAGCGGC TTTTTGCTGTCTACC Synpcc7942_0768 760522 - 761178 + | hypothetical protein Synpcc7942_0769 761226 - 762128 + | hypothetical protein TERM 433 762767 - 762781 + G 71 -4.3 -4.68209 | ACAGATCCAGCAGCG TCAGT CCAAC ACTGA TTTGTTTATTGGGCT Synpcc7942_0770 762159 - 763643 + | hypothetical protein Synpcc7942_0771 764854 - 763640 - | hypothetical protein Synpcc7942_0772 765577 - 764984 - | hypothetical protein Synpcc7942_0773 766197 - 765592 - | hypothetical protein TERM 434 766215 - 766199 - H 73 -9.5 -3.57144 | opp_overlap 766191 TCCTGCAGGCTCAAA GCCTTTA TCC TAAAGGC ATGCCCCATCTGAAT Synpcc7942_0774 766216 - 767103 + | esterase Synpcc7942_0775 767721 - 767242 - | hypothetical protein Synpcc7942_0776 768626 - 767721 - | farnesyl-diphosphate synthase Synpcc7942_0777 769538 - 768669 - | methenyltetrahydrofolate cyclohydrolase Synpcc7942_0778 769574 - 770038 + | hypothetical protein TERM 435 770258 - 770277 + G 71 -9.3 -3.75332 | AGCAACCTAACTGGA GCGATCG CGAGCC CGATCGC TTTGCCTTGGGGCCT Synpcc7942_0779 770131 - 772593 + | metal dependent phosphohydrolase Synpcc7942_0780 773958 - 772585 - | serine/threonine protein kinase TERM 436 773026 - 773010 - G 79 -9.4 -4.2074 | overlap 773006 GTCCCAAGAGAGAAA GCCGCA GGCCT TGCGGC GGGATTCGCAGGCGT Synpcc7942_0781 776520 - 774004 - | phosphoenolpyruvate synthase TERM 437 776591 - 776579 - R 71 -3.4 -4.74132 | AGATCGCAGTAAAAA CAAC GGTTT GTTG AAAAGGCTCAGGATT Synpcc7942_0782 778556 - 776760 - | ATPase TERM 438 778067 - 778047 - G 72 -6.2 -4.42238 | gap 1, overlap 778049 CCACTGCAACCAAAA CATGGCGAT CGCG ATCGCCA-G CAATGAAACAATATC TERM 439 778066 - 778049 - G 75 -9.9 -3.81651 | overlap 778047 ACTGCAACCAAAACA TGGCGAT CGCG ATCGCCA GCAATGAAACAATAT TERM 440 778207 - 778185 - G 73 -5.5 -4.65895 | gap 1, overlap 778186 CGTGCGATCGAAAAA GCG-CACGGC CAGA GCCGTGACGT GCTGGAACAAATCTT hisG 779245 - 778589 - | ATP phosphoribosyltransferase catalytic subunit TERM 441 779697 - 779684 - gH 73 -9.5 -3.57406 | overlap 779682 779685 GCGCGAGCAGAAAGA CGGCG AGCC CGCCG AGAGGCCCGAGCGGC Synpcc7942_0784 779531 - 779848 + | hypothetical protein Synpcc7942_0785 779781 - 781919 + | penicillin-binding protein 1A Synpcc7942_0786 782076 - 782942 + | hypothetical protein Synpcc7942_0787 783007 - 783885 + | putative purple acid phosphatase Synpcc7942_0788 784748 - 783954 - | glutathione S-transferase Synpcc7942_0789 785167 - 784844 - | hypothetical protein TERM 442 785242 - 785218 - R 100 -9.3 -5.60993 | TCGGCCAGAAAAAAA CGGCTGAGA GAAAAAT TCCCAGCCG CAATTCAGTCATTGA Synpcc7942_0790 785710 - 785282 - | RNA-binding region RNP-1 TERM 443 785468 - 785479 + g 79 -7.2 -4.62471 | overlap 785467 TTCATTGTCGCGCTC GCGC GGTT GCGC TTTTTCGAGCTTGAG TERM 444 785753 - 785736 - R 70 -4.8 -4.56978 | CTCTCAAACAACAAA CGGGAT AAGGGA ACCCCG TCATGGCAAAACTGT TERM 445 785954 - 785935 - R 74 -2 -5.02476 | AGATTGCGTAAAAAA GCCTATGC CACT GATTAGGC TAACACGGCATTTGC Synpcc7942_0791 787211 - 785973 - | polyA polymerase Synpcc7942_0792 788490 - 787255 - | putative multidrug efflux MFS transporter Synpcc7942_0793 789261 - 788593 - | hypothetical protein TERM 446 789428 - 789399 - R 91 -5.7 -5.34555 | CTACAGCATAAAAAA TCAGCAACCGACC CAAA GACCCATTGCTGA AGTTGCAGAGTATGC Synpcc7942_0794 790233 - 789460 - | membrane-associated 30 kD protein-like Synpcc7942_0795 791047 - 790436 - | hypothetical protein Synpcc7942_0796 791175 - 791720 + | hypothetical protein Synpcc7942_0797 792010 - 792270 + | hypothetical protein ruvC 792804 - 792319 - | Holliday junction resolvase Synpcc7942_0799 794390 - 792810 - | Elongator protein 3 Synpcc7942_0800 795048 - 794455 - | hypothetical protein TERM 447 795646 - 795634 - g 74 -6.9 -4.42667 | overlap 795635 TCAAAATCACCAAAA CCGGC AAC GCCGA CACCCCGATTGCCCA Synpcc7942_0801 795123 - 795812 + | superoxide dismutase TERM 448 795847 - 795879 + F 88 -10.6 -4.13767 | gap 1, overlap 795846 TGCTCTGACAGCGAT CGC-TAACGCTCGGC TCCG GTCGGGCGTTGCGCG TTTTAGGCTGAGAAA Synpcc7942_0802 795917 - 796504 + | allophycocyanin alpha chain-like Synpcc7942_0803 797289 - 796507 - | hypothetical protein TERM 449 798101 - 798122 + GH 78 -12.3 -2.87132 | CGAGCGGGCGTGGCT GCGCCGGAT GCTT ATCTGGCGC TCTATCACGACCAAG pdxA 797288 - 798349 + | 4-hydroxythreonine-4-phosphate dehydrogenase Synpcc7942_0805 798349 - 799095 + | hypothetical protein TERM 450 799496 - 799456 - g 70 -5.4 -4.43859 | gap 1, overlap 799457 799460 CAGAAGCGCAGAAAA CTGATCGCTGGCGCAAGAT TGCG ATCGAG-GCCAGCGAACAA TCAGAACGCCTCTAC Synpcc7942_0806 799095 - 799826 + | hypothetical protein Synpcc7942_0807 799840 - 800679 + | hypothetical protein Synpcc7942_0808 802980 - 800851 - | HAD family hydrolase Synpcc7942_0809 803073 - 804815 + | hypothetical protein TERM 451 804987 - 804974 - g 71 -8.1 -3.93695 | GGCAGCATCGACAAA CTGCG ATCG CGCAG CACTATGCCGCTCCG Synpcc7942_0810 804853 - 805086 + | hypothetical protein TERM 452 805479 - 805465 - g 90 -8.6 -5.11937 | AATAACCTCAAAAAA GATTGG GTT CCAATC AGCCTCTATGCCGTG Synpcc7942_0811 805186 - 806769 + | Na+/H+ antiporter Synpcc7942_0812 806893 - 807813 + | heat shock protein DnaJ-like hisZ 807839 - 809101 + | ATP phosphoribosyltransferase regulatory subunit Synpcc7942_0814 809134 - 809358 + | ferredoxin-like protein TERM 453 809887 - 809860 - g 78 -13.5 -3.14132 | opp_overlap 809863 809872, overlap 809840 TTGGTTTTGGATGAA CCATCAGCAGC CCTGTC GCCGCTGATGG TTGCGACGGTCTTCG Synpcc7942_0815 809365 - 810096 + | ATPase Synpcc7942_0816 812226 - 810181 - | diguanylate cyclase/phosphodiesterase Synpcc7942_0817 812723 - 812331 - | ferric uptake regulator family protein Synpcc7942_0818 812955 - 813224 + | phosphoribosylformylglycinamidine synthase subunit PurS Synpcc7942_0819 813221 - 813886 + | phosphoribosylformylglycinamidine synthase subunit I Synpcc7942_0820 813960 - 814394 + | hypothetical protein TERM 454 815385 - 815406 + G 79 -7.3 -4.52589 | gap 1, opp_overlap 815384 GCACTGGCGATCAAC CGCGAT-GTG ATC CGCGATCGCG TTTTCTATGGACAGG TERM 455 815456 - 815473 + G 71 -7.7 -4.07568 | overlap 815449 815448 GGTTCCTTCGGAGTT TCCGGTT TCGG AGCCGGA TTTTCCGCGCAACAA Synpcc7942_0821 814476 - 816077 + | periplasmic oligopeptide-binding TERM 456 816986 - 817006 + G 88 -7.5 -5.03713 | CCCTGCGAGACTATT CGACGGTGC AGG GCATCATCG TTTTCTTTGGTTGTT Synpcc7942_0822 816064 - 817089 + | permease protein of oligopeptide ABC Synpcc7942_0823 817168 - 818214 + | hypothetical protein Synpcc7942_0824 818189 - 819895 + | hypothetical protein Synpcc7942_0825 820654 - 819956 - | hypothetical protein Synpcc7942_0826 820693 - 821628 + | hypothetical protein Synpcc7942_0827 822803 - 821757 - | cobalamin synthesis protein cobW-like TERM 457 822529 - 822541 + g 71 -9.1 -3.71527 | overlap 822532 TCAATCTGTTCCCGC CGCTG CAA CAGCG TTTGCATGGTTGGCA TERM 458 822792 - 822771 - G 75 -5.8 -4.58395 | GCCAGCTCCTAAAAA GCCGGTGA TCACCG TCACGGGC AGCTTATGCATCGAT Synpcc7942_0828 823241 - 822873 - | hypothetical protein TERM 459 822918 - 822928 + g 93 -8.2 -5.1848 | CGCCAAGCTGACGTA GCGC AGG GCGC TTTTTTCAGTTGATT Synpcc7942_0829 823506 - 823838 + | lipoproteins-like TERM 460 824907 - 824896 - g 75 -5.8 -4.56597 | GCTCTCCTCGAAAAA GCTG ATCG CAGC TTCGACTATCCCGTG asnC 823942 - 825330 + | asparaginyl-tRNA synthetase Synpcc7942_0831 826005 - 825403 - | hypothetical protein Synpcc7942_0833 827112 - 828182 + | hypothetical protein TERM 461 828403 - 828386 - f 77 -8.5 -4.01381 | AGGCAACCCAAAGAA TCCAGTT TCTA AACTGGA ACTAAAATTCCCGAC Synpcc7942_0834 828582 - 829235 + | hypothetical protein TERM 462 829333 - 829314 - f 77 -6.4 -4.67353 | opp_overlap 829315, overlap 829315 CGATTGAGCCAAAAA GGGGTGAA ACCA TTCACCCT TTTTTATTGACCAGT TERM 463 829332 - 829315 - f 72 -9.9 -3.3993 | opp_overlap 829315, overlap 829314 GATTGAGCCAAAAAG GGGTGAA ACCA TTCACCC TTTTTTATTGACCAG TERM 464 829315 - 829332 + F 100 -9.9 -5.4505 | opp_overlap 829315 829314 GATTGAGCCAAAAAG GGGTGAA ACCA TTCACCC TTTTTTATTGACCAG TERM 465 829521 - 829538 + F 100 -6.9 -5.62288 | AGTTGAATAATTGCT GCGGTCG CTCT TGGCCGC TTTTTCTTTTCTTGG ruvB 829661 - 830788 + | Holliday junction DNA helicase B TERM 466 830910 - 830900 - T 74 -8.2 -3.93695 | opp_overlap 830905 830906, overlap 830901 TCCACCAGGGACAAA GGGG AGT CCCC CGTCGGATGGCAGCG TERM 467 830905 - 830942 + T 100 -8.3 -5.43866 | gap 1, opp_overlap 830900 830901, overlap 830906 CAGGGACAAAGGGGA GTCCCCCGTC-GGATGGC AGC GCGAACCAGGCGGGGGAG TTTTTTTAGCCATTG TERM 468 830906 - 830941 + T 88 -11.8 -3.85235 | gap 1, opp_overlap 830900 830901, overlap 830905 AGGGACAAAGGGGAG TCCCCCGTC-GGATGGC AGC GCGAACCAGGCGGGGGA GTTTTTTTAGCCATT Synpcc7942_0836 832182 - 831166 - | hypothetical protein Synpcc7942_0837 832811 - 832179 - | hypothetical protein TERM 469 832615 - 832604 - G 72 -5.8 -4.36914 | overlap 832606 GCTCTTCGCAGAAAA TGCG TCGC CGCA GGTCCCAGTAGCCCG TERM 470 832685 - 832671 - G 77 -2.8 -5.16132 | CAGATGAAAAGAAAA GCGA TCGGAAC TCGC CGTTGGCGACAGTCG Synpcc7942_0838 833957 - 832860 - | Elongator protein 3/MiaB/NifB TERM 471 832903 - 832888 - G 77 -10.4 -3.81447 | GAGAGGGCAGAACAA GCGCCA CATT TGGCGC AGCCCGCAGACATGG Synpcc7942_0839 834954 - 833950 - | Nitrilase TERM 472 834126 - 834140 + g 70 -5 -4.42788 | CCATCATTCGCTTAC GTTTGG TGA TCAAAC TTTTGTCGAGTTCAG Synpcc7942_0840 835473 - 834991 - | hypothetical protein Synpcc7942_0841 835671 - 837011 + | putative flavoprotein involved in K+ transport Synpcc7942_0842 838405 - 837065 - | glutathione reductase TERM 473 838478 - 838438 - R 90 -4.5 -5.4505 | opp_overlap 838441, overlap 838439 838441 838466 GGCCCGAACAAAAAA TGAGGGCAGCCGCGCTGGA AGT TCAAGAGCAGCCACCCTTT GCTGGTCTGCGACGC TERM 474 838477 - 838439 - R 72 -8 -3.86307 | opp_overlap 838441, overlap 838438 838441 838466 GCCCGAACAAAAAAT GAGGGCAGCCGCGCTGGA AGT TCAAGAGCAGCCACCCTT TGCTGGTCTGCGACG TERM 475 838475 - 838441 - R 78 -10.6 -3.5087 | opp_overlap 838441, overlap 838439 838438 838466 CCGAACAAAAAATGA GGGCAGCCGCGCTGGA AGT TCAAGAGCAGCCACCC TTTGCTGGTCTGCGA Synpcc7942_0843 838935 - 838504 - | hypothetical protein Synpcc7942_0844 839809 - 839099 - | phosphoesterase PHP-like Synpcc7942_0845 839873 - 840079 + | hypothetical protein TERM 476 840109 - 840082 - T 100 -12 -4.99312 | AACACAACAATAAAA GGCGATGGCTCC AGAG GAAACCACCGCC GACTATGTTCACCCG Synpcc7942_0846 841081 - 840263 - | hypothetical protein Synpcc7942_0847 842232 - 841120 - | twitching motility protein uvrA 845347 - 842336 - | excinuclease ABC subunit A TERM 477 845436 - 845453 + r 90 -9.1 -4.56969 | TGCGCTAAAGTTGGG GTGCCTG TTGT CAGGCGC TTTGTTTCTCAGCTT Synpcc7942_0849 846433 - 845822 - | hypothetical protein Synpcc7942_0850 846679 - 846479 - | hypothetical protein TERM 478 846542 - 846514 - G 70 -5.1 -4.50761 | opp_overlap 846514 846520, overlap 846516 ACGAATCCAAATAAA CCCGAGCGGCG CGGCGAT CGCTGCCCGTG TTCTGCAACAGAAAC TERM 479 846750 - 846719 - H 90 -4.3 -5.45726 | overlap 846745 GACAGCCCAAAAAAA CCCGGAGGCGATC GCTAGG GATCAACGCCGAG GCCACCAGGGCTTAG TERM 480 847081 - 847065 - H 79 -3.7 -5.15634 | opp_overlap 847065, overlap 847067 CAGCTCAGCAAAAAA GATTACA AAA TGTAAAC TTCCTGAGTAAGACA TERM 481 847866 - 847881 + G 76 -4 -4.87665 | gap 1, overlap 847869 ACCATTTTTGAAGGC CAGTCCC TAG GGGA-TG TTTTTCTGACTCCAA Synpcc7942_0851 847233 - 848258 + | phosphoribosylaminoimidazole synthetase TERM 482 849635 - 849619 - g 71 -4.3 -4.56775 | ATCCTTCTCCAAAAA TGCGGGC TTT ACCGGCA CCCGTTGCGCTTTCA Synpcc7942_0853 848870 - 850105 + | L,L-diaminopimelate aminotransferase Synpcc7942_0854 850233 - 852629 + | hypothetical protein TERM 483 852978 - 852968 - f 80 -5.4 -5.00138 | opp_overlap 852968 CAGCCAAATTAAAAA TCGT AAA ACGA TTGTAAATGCTGCTT TERM 484 852988 - 853002 + F 70 -4.2 -4.70626 | opp_overlap 852987, overlap 852990 AAACGATTGTAAATG CTGCTT GAG AAGCCG TTTTTAAAGTTGTTG Synpcc7942_0855 853629 - 854882 + | response regulator receiver domain-containing protein Synpcc7942_0856 854933 - 855295 + | response regulator receiver domain-containing protein Synpcc7942_0857 855315 - 855821 + | CheW protein TERM 485 858110 - 858092 - g 73 -11.8 -2.91276 | overlap 858091 GTTTCTCCTACAAAC GTTGCAAG TGT CTTGCAAC TAGCGGTACACGCGA Synpcc7942_0858 855893 - 860113 + | methyl-accepting chemotaxis sensory transducer with phytochrome sensor TERM 486 860348 - 860313 - g 76 -13.4 -2.75183 | overlap 860310 860322 ACCCTCAGCGAACTA GCGCATCAACTTGAAG ACTT CTTTAAGGTGATGCGC AGCGGCAAAAACTTT Synpcc7942_0859 860118 - 862976 + | CheA signal transduction histidine kinase Synpcc7942_0860 862987 - 863946 + | CheW protein Synpcc7942_0861 865469 - 864180 - | bifunctional sterol desaturase/short chain dehydrogenase TERM 487 865745 - 865755 + G 72 -2.4 -4.87892 | overlap 865743 TCGTGCTGTGGAAGG AGGG GCA CCCA TTTCTTTTGTTGCCA Synpcc7942_0862 865596 - 865973 + | hypothetical protein Synpcc7942_0863 866027 - 867208 + | hypothetical protein Synpcc7942_0864 867395 - 867913 + | hypothetical protein Synpcc7942_0865 867986 - 868477 + | nucleotide-binding protein Synpcc7942_0866 868540 - 869121 + | hypothetical protein Synpcc7942_0867 869169 - 869504 + | hypothetical protein Synpcc7942_0868 869505 - 871253 + | hypothetical protein Synpcc7942_0869 871262 - 871852 + | hypothetical protein Synpcc7942_0870 872113 - 871886 - | hypothetical protein Synpcc7942_0871 872330 - 872106 - | hypothetical protein Synpcc7942_0872 872362 - 872940 + | hypothetical protein Synpcc7942_0873 874196 - 873108 - | hypothetical protein Synpcc7942_0874 877449 - 874390 - | DEAD/DEAH box helicase-like TERM 488 874848 - 874837 - G 71 -4.4 -4.56597 | overlap 874839 CTGTTCCTGCAAAAA TTGC TGCA GCAA ACTACCCCAGCCCGC TERM 489 875831 - 875821 - G 76 -6.8 -4.58283 | overlap 875823 GAAGCGCTGCAAAAA GCTG AGC CAGC CCACCCCCCGCTCTT Synpcc7942_0875 877887 - 877453 - | hypothetical protein TERM 490 880434 - 880421 - g 74 -4.5 -4.7373 | gap 1, opp_overlap 880423 880431, overlap 880422 880423 CGACTCCAGCAAAAA CTCGGC GAT GCCG-G TGCCGTTGTCCTCGG alaS 877976 - 880675 + | alanyl-tRNA synthetase TERM 491 880757 - 880703 - f 91 -9.3 -4.59109 | gap 1, opp_overlap 880702 880701, overlap 880705 CAGACGGCTCAAAAA CATGTCCTCCGTGATTACTGCTC-CC TCAA GACGAGCAGCGATCGCGGAGGACAAC CCTTTGTGGTGGAGA TERM 492 880755 - 880705 - f 100 -16.3 -3.90762 | gap 1, opp_overlap 880702 880701, overlap 880703 GACGGCTCAAAAACA TGTCCTCCGTGATTACTGCTC-CC TCAA GACGAGCAGCGATCGCGGAGGACA ACCCTTTGTGGTGGA Synpcc7942_0877 880867 - 883485 + | Elongator protein 3/MiaB/NifB TERM 493 885736 - 885748 + G 70 -10.5 -3.33696 | ACTCTACGCTTGGAT GGGGG CTT CCCCC TTGATTCGGGCAGAA TERM 494 886113 - 886063 - g 93 -19 -2.78596 | overlap 886029 886026 886050 886046 886047 GATCGCTGCATCAGA GCCGACTCCAGCGGAGCCGACTCC AGC GGAGCCGACTCCAGCGGAGCCAAC TCCAGCGGAGCCAAC Synpcc7942_0878 883835 - 886261 + | ribonuclease Synpcc7942_0879 886245 - 886892 + | RNase HII Synpcc7942_0880 887472 - 886915 - | hypothetical protein Synpcc7942_0881 887552 - 888427 + | prephenate dehydratase Synpcc7942_0882 889096 - 888440 - | peptidase S16, lon-like TERM 495 888527 - 888549 + g 74 -12 -3.0806 | CCCCAAAATTTCTAG TTCGCGATCG AGG CGATCGCGGG TGTTCAGCATTTCGA TERM 496 889292 - 889263 - R 100 -16.6 -5.02476 | opp_overlap 889263 889266 889269 AGATTGGCTAAAAAA CAAGAAGCGGGA GTTCCT TCCCGCTTCTTG TTTCCAGTGATGACT TERM 497 889263 - 889292 + r 100 -17.3 -3.62275 | opp_overlap 889263, overlap 889266 889269 AGATTGGCTAAAAAA CAAGAAGCGGGAG TTCC TTCCCGCTTCTTG TTTCCAGTGATGACT TERM 498 889266 - 889289 + r 100 -13.2 -3.94634 | opp_overlap 889263, overlap 889263 889269 TTGGCTAAAAAACAA GAAGCGGGAG TTCC TTCCCGCTTC TTGTTTCCAGTGATG TERM 499 889269 - 889286 + r 81 -9.1 -4.09628 | opp_overlap 889263, overlap 889266 889263 GCTAAAAAACAAGAA GCGGGAG TTCC TTCCCGC TTCTTGTTTCCAGTG rpsJ 889623 - 889306 - | 30S ribosomal protein S10 TERM 500 889684 - 889650 - R 95 -10 -4.62872 | opp_overlap 889656 889678, overlap 889652 889654 ATCAAGGTTCAAAAA GACAGAGTCGGTGATG ACT CACCACCGACTCCTTA GGGGGTTAAATCCTA TERM 501 889682 - 889652 - R 93 -12.6 -3.92577 | opp_overlap 889656 889678, overlap 889650 889654 CAAGGTTCAAAAAGA CAGAGTCGGTGATG ACT CACCACCGACTCCT TAGGGGGTTAAATCC TERM 502 889680 - 889654 - R 100 -17.4 -3.54256 | opp_overlap 889656 889678, overlap 889652 889650 AGGTTCAAAAAGACA GAGTCGGTGATG ACT CACCACCGACTC CTTAGGGGGTTAAAT TERM 503 889656 - 889678 + r 73 -12 -2.72379 | opp_overlap 889654 889652 889650 GTTCAAAAAGACAGA GTCGGTGATG ACT CACCACCGAC TCCTTAGGGGGTTAA Synpcc7942_0884 890926 - 889697 - | elongation factor Tu TERM 504 890738 - 890755 + g 84 -5.5 -5.06414 | overlap 890740 AACGTGAGCCGTGTT GATCGTG ATAC CACGAGC TTTTTCTTCCGGAGC Synpcc7942_0885 893037 - 890953 - | elongation factor G TERM 505 891741 - 891771 + g 79 -6.8 -4.72333 | opp_overlap 891725 891750 GGAAGGTCGGATCTT CTTCCGAAAGCGCT TGC AACGCCTTCGAAAG TTTTTCCATATCGTT TERM 506 891977 - 891987 + g 77 -8.2 -4.25064 | opp_overlap 891977, overlap 891975 TTGAGGATGATCAGA CGGG AAA CCCG TTCTTTCTTCCCTTT Synpcc7942_0886 893582 - 893112 - | 30S ribosomal protein S7 rpsL 894124 - 893750 - | 30S ribosomal protein S12 TERM 507 894143 - 894133 - R 74 -8.2 -3.89822 | opp_overlap 894133 894130 TAGGCATTTCAGAAA GCCG GTT CGGC TGCTCTTGGAAAAGA Synpcc7942_0888 894639 - 894280 - | mannose-1-phosphate guanylyltransferase-like Synpcc7942_0889 896453 - 894636 - | hypothetical protein TERM 508 896220 - 896234 + g 72 -10 -3.67775 | TTCCAAGCCAAGGCC GTTGCG CAG CGCAAC TTCTTCAATCCAGAT Synpcc7942_0890 896748 - 901358 + | glutamate synthase (ferredoxin) TERM 509 901384 - 901401 + F 100 -10.5 -5.4251 | TGTTAGCTCATCCAT GGCCTGC GATC GCGGGCC TTTTTTCTGTCTGGA Synpcc7942_0891 901736 - 902035 + | hypothetical protein TERM 510 902064 - 902086 + T 93 -8.4 -5.08601 | opp_overlap 902064 902062 CCTCTCAAATACAGA GCCTCGGC ACCAGTG GTCGAGGC TTTTTGTTGCGATCG cofG 903119 - 902109 - | FO synthase subunit 1 TERM 511 902539 - 902581 + g 100 -21.4 -3.55444 | opp_overlap 902542, overlap 902533 902542 CCCCAGCGATCGTGA CAAGCCGCGATCGCTTCAAG TGT CTCAAGGCGATCGCGGCTTG TTTCACCGATCCCCA TERM 512 902542 - 902578 + g 100 -17.3 -3.91716 | opp_overlap 902542, overlap 902533 902539 CAGCGATCGTGACAA GCCGCGATCGCTTCAAG TGT CTCAAGGCGATCGCGGC TTGTTTCACCGATCC TERM 513 902578 - 902542 - G 100 -19.5 -3.31461 | opp_overlap 902533 902542 902539 CAGCGATCGTGACAA GCCGCGATCGCTTCAAG TGT CTCAAGGCGATCGCGGC TTGTTTCACCGATCC Synpcc7942_0893 903201 - 904283 + | photosystem q(b) protein TERM 514 904361 - 904312 - T 86 -11 -3.9777 | gap 2, opp_overlap 904320 904326, overlap 904326 CGGAACAGCTAGAAA TTGAGTAGGTGAAAGGGTCTGGGA GTAA TCTCAGACCCTTTC-CCTT-TCAA GAAGTCCCACCGCAC TERM 515 904320 - 904355 + T 100 -17 -3.54424 | opp_overlap 904312 904326, overlap 904326 CTAGAAATTGAGTAG GTGAAAGGGTCTGGGA GTAA TCTCAGACCCTTTCCC TTTCAAGAAGTCCCA TERM 516 904326 - 904349 + T 100 -13.2 -3.84451 | opp_overlap 904312 904326, overlap 904320 ATTGAGTAGGTGAAA GGGTCTGGGA GTAA TCTCAGACCC TTTCCCTTTCAAGAA TERM 517 904349 - 904326 - T 81 -11 -3.62275 | opp_overlap 904326 904320, overlap 904312 ATTGAGTAGGTGAAA GGGTCTGGGA GTAA TCTCAGACCC TTTCCCTTTCAAGAA aroK 905417 - 904845 - | shikimate kinase Synpcc7942_0895 906657 - 905485 - | hypothetical protein Synpcc7942_0896 906832 - 907638 + | septum site-determining protein MinD Synpcc7942_0897 907653 - 907928 + | cell division topological specificity factor MinE Synpcc7942_0898 907925 - 908317 + | ferredoxin like protein TERM 518 908414 - 908438 + T 100 -10 -5.40464 | opp_overlap 908414 GGCTCTGAGCTCAAA CCCAGTCTTC TTGTT GGAGGCTGGG TTTTTGTTTGTCGTA Synpcc7942_0899 909295 - 908498 - | hypothetical protein TERM 519 909383 - 909362 - R 100 -12.3 -5.76633 | opp_overlap 909360 909362 TGACAGACAAAAAAA TCGCCCTGG AATT CCAGAGCGA TATTCGTCGAGACAA TERM 520 909362 - 909383 + r 70 -10.1 -3.13403 | opp_overlap 909362, overlap 909360 TGACAGACAAAAAAA TCGCCCTGG AATT CCAGAGCGA TATTCGTCGAGACAA Synpcc7942_0900 909643 - 909440 - | hypothetical protein TERM 521 909563 - 909584 + g 84 -6.6 -4.88407 | gap 1, overlap 909532 909532 909563 GTCGACATTGGCACG CC-CCAGCA TTGAT TGCTGGCGG TTTTTGATTGCCTGC Synpcc7942_0901 909780 - 910676 + | haloalkane dehalogenase Synpcc7942_0902 911694 - 910735 - | hypothetical protein TERM 522 911733 - 911708 - R 100 -14.7 -5.38249 | ATGAAGCACAAAAAA CCTCCGAGAGC GATC GCCCCCGGAGG TTGACCGACAATTTA Synpcc7942_0903 914341 - 911756 - | bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase TERM 523 913280 - 913270 - G 84 -6.8 -4.87665 | GCGGACGCACAAAAA CGTC GCT GACG GGTAGACCGAGCTGC Synpcc7942_0904 914613 - 915158 + | hypothetical protein TERM 524 915206 - 915219 + F 100 -9.5 -5.26918 | opp_overlap 915195 AGGAGGGGCAGTCCA GGGGC GATC GCCCC TTTTTTGTGGCCTGT Synpcc7942_0905 915588 - 916130 + | hypothetical protein TERM 525 916193 - 916230 + F 95 -15.1 -3.16475 | opp_overlap 916193 916197, overlap 916197 GAATCACTGATATTA GAAAGCACTTCTATCTA GCTT TGGGTAGAGGTGCTTTC TTCGATATATGCGTA TERM 526 916197 - 916226 + F 85 -10.1 -4.24285 | opp_overlap 916197 916193, overlap 916193 CACTGATATTAGAAA GCACTTCTATCTA GCTT TGGGTAGAGGTGC TTTCTTCGATATATG TERM 527 916690 - 916678 - g 73 -5.5 -4.59773 | opp_overlap 916685, overlap 916685 GGTGATGGGCAAAAA CCGAA ATT CTCGG GGATTTGTCGCCGGA Synpcc7942_0906 916262 - 916747 + | hypothetical protein Synpcc7942_0907 916954 - 917166 + | hypothetical protein Synpcc7942_0908 917280 - 917987 + | hypothetical protein Synpcc7942_0909 918135 - 918491 + | HesB/YadR/YfhF Synpcc7942_0910 918560 - 918988 + | hypothetical protein Synpcc7942_0911 918998 - 919249 + | hypothetical protein TERM 528 921078 - 921059 - g 70 -5.6 -4.49389 | ATTCCACAATCAAAA CCGGTTGC GATC GCTACCAG CCCATCCAAATCCCC Synpcc7942_0912 919325 - 921283 + | DNA polymerase III, tau subunit Synpcc7942_0913 921780 - 921286 - | N-acetyltransferase-like Synpcc7942_0914 922391 - 921780 - | tRNA-(MS(2)IO(6)A)-hydroxylase-like Synpcc7942_0915 922837 - 922388 - | 3-dehydroquinate dehydratase Synpcc7942_0916 922976 - 922848 - | hypothetical protein Synpcc7942_0917 923793 - 923527 - | hypothetical protein Synpcc7942_0918 924079 - 926028 + | long-chain-fatty-acid CoA ligase Synpcc7942_0919 926077 - 926523 + | hypothetical protein TERM 529 926558 - 926578 + T 100 -10.5 -5.14965 | CAATTTGTGTTGATA GCTCACAAA AAG TTTGTGGGC TTTTTTCATGCCCGT Synpcc7942_0920 926974 - 926720 - | photosystem I reaction center Synpcc7942_0921 927394 - 927092 - | hypothetical protein Synpcc7942_0922 928293 - 927391 - | glutamate--tRNA ligase TERM 530 928290 - 928270 - G 71 -8.9 -3.72576 | overlap 928271 GGGGGTTGGAGCAAA CCGACCGCG AGG CGCGATCGC CACTAGCCCCAGTAT TERM 531 928289 - 928271 - G 71 -12.4 -2.83403 | overlap 928270 GGGGTTGGAGCAAAC CGACCGCG AGG CGCGATCG CCACTAGCCCCAGTA Synpcc7942_0923 929168 - 928293 - | 5'-methylthioadenosine phosphorylase Synpcc7942_0924 931214 - 929220 - | multi-sensor signal transduction histidine kinase TERM 532 929474 - 929460 - G 75 -6.4 -4.59773 | opp_overlap 929460 929436 TTCGACCCGGAAAAA GCGATC GAA AATCGC CTCTTGATCTTCGGC TERM 533 931121 - 931093 - G 75 -5.9 -4.58395 | TTGACGGCCCAAAAA GTCAGCCCGCTCA TAA TCAGCGAGACGAC CAAAGTGGCGATCGC Synpcc7942_0925 932579 - 931278 - | phosphoribosylamine--glycine ligase TERM 534 932960 - 932935 - g 76 -4 -4.84761 | gap 1, overlap 932936 ACACCCTTAGAAAAA CGAGCGATTCG AGAGG CGA-TCGCCCA ACTCCTGGATGCGGC Synpcc7942_0926 932734 - 933993 + | hypothetical protein TERM 535 934668 - 934647 - g 70 -5.2 -4.43501 | gap 1, opp_overlap 934647, overlap 934663 934665 AACCGATCCAGAAAA GCGCATCCT AGACA AGGAT-CGC TTCCGTCGCGACCTC Synpcc7942_0927 934021 - 934746 + | phosphoribosylaminoimidazole-succinocarboxamide synthase TERM 536 934981 - 934994 + G 73 -8.1 -4.13767 | opp_overlap 934965 934960 CCGACCCCCGCGAAG CCAGC CACT GCTGG TTTTGCGATCGAAGG TERM 537 936058 - 936033 - g 79 -11.9 -3.61398 | overlap 936019 936018 936039 CTTTGGCGGCAACAA CCAAAAGCTGG GCTT CCAGCTCTCGG TGGGTCAGCGTCAGG TERM 538 936052 - 936039 - g 82 -8.1 -4.56133 | overlap 936033 CGGCAACAACCAAAA GCTGG GCTT CCAGC TCTCGGTGGGTCAGC Synpcc7942_0928 934864 - 937029 + | outer envelope membrane protein lpxC 937039 - 937893 + | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase fabZ 937912 - 938379 + | (3R)-hydroxymyristoyl-ACP dehydratase TERM 539 938621 - 938606 - g 100 -4 -5.67063 | gap 1 CCCAGGACAAAAAAA CTGA-CG GAT CGCTCAG CGTCGTGCGGATTGG Synpcc7942_0931 938386 - 939192 + | UDP-N-acetylglucosamine acyltransferase lpxB 939193 - 940392 + | lipid-A-disaccharide synthase Synpcc7942_0933 940925 - 940410 - | hypothetical protein TERM 540 941118 - 941131 + G 86 -5.2 -5.26875 | overlap 941119 GCCACGGCGACCCCC GCCC AAATTG GGGC TTTTTTAATTGCCCA Synpcc7942_0934 940995 - 942056 + | hypothetical protein Synpcc7942_0935 942838 - 942068 - | hypothetical protein TERM 541 942294 - 942319 + g 73 -8.3 -4.07568 | gap 1, opp_overlap 942293 ATGATCACCAAGGAG GTGCCGAT-CGC CTT GCGCATGGGCAC TTTTCCCAGCAGCAC Synpcc7942_0936 943388 - 942843 - | rhodanese-like protein Synpcc7942_0937 944127 - 943435 - | hypothetical protein Synpcc7942_0938 944220 - 944540 + | ArsR family transcriptional regulator Synpcc7942_0939 944618 - 945244 + | adenylylsulfate kinase Synpcc7942_0940 945639 - 945289 - | XRE family transcriptional regulator Synpcc7942_0941 947773 - 946064 - | ATPase TERM 542 946108 - 946129 + g 78 -4.3 -4.90455 | CTTTTTGCTTAGCAC GCTTCGCCG CTGC CTTCGAAGC TTTTTCTGCCTCTAT TERM 543 947931 - 947904 - R 77 -3.4 -5.11063 | overlap 947890 AGGACCCAAGAAAAA CCGCTGCC TTTCCGAAGTCC AGCAGCGG TCAGTTGAGGCCCTA Synpcc7942_0942 949849 - 947957 - | FtsH peptidase TERM 544 949045 - 949055 + g 74 -3.2 -4.96468 | CATCGATGAAGACGA TGCA AGG TGCG TTTTCTTTGGCTTTC TERM 545 949811 - 949793 - G 78 -6 -4.8048 | TTGCCAGACGAAAAA GCCGAT GACCAGG ATCGGC AGAGTCCAGAGTGCC TERM 546 950935 - 950954 + G 73 -8.6 -4.1899 | GCGCCAGCTCTGCGA TCAACGGC GGAT GCTGTTGA TTTTGGATGAAGTCC Synpcc7942_0943 950237 - 951505 + | acetylornithine aminotransferase Synpcc7942_0944 951502 - 952740 + | FolC bifunctional protein Synpcc7942_0945 953767 - 952793 - | hypothetical protein TERM 547 954014 - 954000 - H 72 -8.6 -3.74077 | opp_overlap 953999 953996 954000 GGTGATATATCTAAA GCTGTT GAA AACAGC ATTGTTCATTGGCAG Synpcc7942_0946 954141 - 955628 + | UDP-galactopyranose mutase Synpcc7942_0947 956714 - 955647 - | ATPase Synpcc7942_0948 957546 - 956719 - | permease protein of sugar ABC transporter TERM 548 957091 - 957079 - G 91 -9.1 -5.0133 | CAGTTGCTCAAAAAA GCTGC GCA GCAGC AGAATCACCAGCGGC Synpcc7942_0949 958424 - 957546 - | permease protein of sugar ABC transporter Synpcc7942_0950 959737 - 958421 - | putative multiple sugar transport system substrate-binding protein TERM 549 960398 - 960385 - g 79 -6.7 -4.7497 | GGCAGCGATCAAAAA GTTGC GATC GCAAC TCCCATTCCCGTTAA Synpcc7942_0951 959837 - 960685 + | nicotinate-nucleotide pyrophosphorylase Synpcc7942_0952 961620 - 960829 - | hypothetical protein TERM 550 961690 - 961740 + r 71 -3.3 -4.74103 | gap 1, overlap 961692 GCCCTGCAGCGTCTA GATGCAG-AAATTTGCAACCGTTG ATGC CCGCGATCGCAGATTTCCTGCAGC TTTTTAAATTGCCGG Synpcc7942_0953 962208 - 961744 - | hypothetical protein Synpcc7942_0954 963300 - 962266 - | glycine cleavage T-protein-like Synpcc7942_0955 963790 - 963272 - | hypothetical protein TERM 551 964266 - 964230 - g 84 -5.2 -5.01732 | gap 1, opp_overlap 964238 AACGCCCTGAAAAAA TCGACT-ATCTCGTTGT CGAA ACAACGGGTTTAGCCGA TCCCCTGCCCGTGGC Synpcc7942_0956 963926 - 965068 + | hypothetical protein TERM 552 965355 - 965342 - g 76 -3.7 -4.8543 | overlap 965343 GAACCCGCAGAAAAA GCCGC CTTT GCGGT CTGGGGCGATCGCCT Synpcc7942_0957 965072 - 965719 + | cob(I)yrinic acid a,c-diamide adenosyltransferase purN 966355 - 965726 - | phosphoribosylglycinamide formyltransferase obgE 967561 - 966530 - | GTPase ObgE TERM 553 967657 - 967673 + G 71 -4.4 -4.57569 | CTTTGGCCGGGATTG CAACGT GGCTG GCGTTG TTTTTGAAGAGATCG Synpcc7942_0960 967595 - 968848 + | ATPase TERM 554 969183 - 969139 - g 70 -12.2 -2.55351 | gap 2, opp_overlap 969134 969154 969156 969182, overlap 969138 TGGGGGTAGATCAAG TGCCTGACCCCGAAGCTTCGCC CGA GGCGATGTTTCGGGGCC-G-CA GCGACACGATGTTGT Synpcc7942_0961 968937 - 969950 + | cell envelope-related function transcriptional attenuator Synpcc7942_0962 971323 - 969968 - | sun protein Synpcc7942_0963 971639 - 971259 - | methyltransferase TERM 555 972237 - 972192 - g 79 -11.9 -3.57462 | gap 1, opp_overlap 972192 GACCCGACGGGGAAA CGCTGGC-TCGAAACCCAACCA ACC TGGCTGGAACTGGAAGCCAGCG GTTGTTTCCGGTTCG Synpcc7942_0964 971856 - 972374 + | hypothetical protein Synpcc7942_0965 972388 - 973350 + | ammonium transporter protein Amt1-like Synpcc7942_0966 973946 - 973359 - | hypothetical protein hemC 974099 - 975061 + | porphobilinogen deaminase Synpcc7942_0968 975143 - 975358 + | hypothetical protein Synpcc7942_0969 976195 - 975368 - | carboxymethylenebutenolidase TERM 556 975751 - 975766 + g 86 -9 -4.7629 | AACCGGTAATTGCGA GGCGAT CGCG ATCGCC TTTTTGGGTTGATGC TERM 557 977866 - 977845 - g 100 -11.5 -4.7497 | opp_overlap 977845 TCCAGCCAGCAAAAA CCCGCCAGC CGGA GCCAGCGGG TTTGTTACAGCGCTA Synpcc7942_0970 976311 - 977882 + | phytoene dehydrogenase-like Synpcc7942_0971 979261 - 977903 - | hypothetical protein TERM 558 978438 - 978448 + g 76 -6.8 -4.65895 | overlap 978421 978435 GCGCCGCCACTGCTG GCCA AGC TGGC TTTTTGACTGGGGGG Synpcc7942_0972 979369 - 979761 + | YjgF-like protein Synpcc7942_0973 980930 - 979758 - | UDP-glucose 6-dehydrogenase Synpcc7942_0974 981137 - 980967 - | UDP-glucose dehydrogenase mraW 982144 - 981254 - | S-adenosyl-methyltransferase MraW Synpcc7942_0976 982168 - 984897 + | CBS TERM 559 984968 - 984946 - T 100 -13.5 -5.5112 | CTGAGCAACAAAAAA GCTGCTCTC GCTAG GAGAGCAGC TTAGAGTCAACAAGC Synpcc7942_0977 986010 - 985009 - | phosphoribulokinase TERM 560 985577 - 985598 + g 77 -8.1 -4.30416 | gap 1, overlap 985563 CCGCGTTCTGCCATA TCGCGTTGGA TCT TCCAA-GCGA TTTTGACTTCGTCAT TERM 561 985682 - 985709 + g 74 -2.7 -5.00884 | overlap 985681 AGCGGATGCAGACCC TCGATCACAAT GATGCG ATTGGGTTCGA TTTTTTCGGGCGGAT Synpcc7942_0978 986415 - 987626 + | ferredoxin-NADP oxidoreductase TERM 562 987668 - 987692 + T 100 -15.1 -5.68039 | overlap 987689 GTCTGAGCGTTGTGA GTGGATGCTTC GAG GAAGCGTCCAC TTTTTTTGTGGCTTT Synpcc7942_0979 988577 - 988074 - | hypothetical protein Synpcc7942_0980 989276 - 988653 - | hypothetical protein TERM 563 989322 - 989301 - R 80 -5.1 -4.90477 | overlap 989302 CAGAAAAAACGAAAA GCTTGCTGC AATC GCAACAAGG CGTCTAACAAATAAA Synpcc7942_0981 991494 - 989800 - | hypothetical protein TERM 564 990615 - 990632 + g 82 -8.3 -4.5442 | opp_overlap 990615 990614 TCAGGTGGCCAAAAT CCCAGCG ATCG CGCAGGG TTTTATGCTTGCGAA Synpcc7942_0982 991553 - 992167 + | hypothetical protein Synpcc7942_0983 992187 - 992873 + | deoxyribose-phosphate aldolase recO 992870 - 993670 + | DNA repair protein RecO Synpcc7942_0985 993654 - 995036 + | hypothetical protein Synpcc7942_0986 995080 - 996231 + | glycosyltransferase Synpcc7942_0987 996723 - 996280 - | ferric uptake regulator family protein Synpcc7942_0988 997274 - 996948 - | hypothetical protein TERM 565 997170 - 997159 - G 70 -3 -4.68593 | CGCACTAGCCAAAAA TCAA TGGT TTGA TTGCGCTCTGCATAG Synpcc7942_0989 997822 - 997379 - | hypothetical protein cobU 998454 - 997912 - | adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase Synpcc7942_0991 999729 - 998464 - | proton extrusion protein PcxA Synpcc7942_0992 999802 - 1001799 + | hypothetical protein TERM 566 1001780 - 1001792 + T 74 -10.5 -3.21912 | CTCAGGAGGCACTGG CCGGC AAG GCCGG TTGCTGACTTAGCCA Synpcc7942_0993 1003145 - 1001766 - | hypothetical protein Synpcc7942_0994 1003746 - 1003177 - | hypothetical protein TERM 567 1003677 - 1003667 - G 71 -4.6 -4.64766 | TCCACACCCCAAAAA CCGC TGA GCAG CCCACAACCACCCAA Synpcc7942_0995 1003809 - 1004204 + | hypothetical protein Synpcc7942_0996 1004254 - 1005240 + | glycerate kinase rpmF 1005432 - 1005256 - | 50S ribosomal protein L32 TERM 568 1005566 - 1005586 + H 70 -5.3 -4.36993 | opp_overlap 1005562 ACGCAGGAACAGAGC GCGCCGCTA GAC TGGAGGTGC TATTTTTTTGCCCTT TERM 569 1006630 - 1006656 + G 71 -7.3 -4.11692 | gap 1, opp_overlap 1006621 AAATCACCGTTGATC TCCCGA-GCTAC AACG GTCGCCTCGGGA TTTTGCAAGTCCATG Synpcc7942_0998 1005621 - 1007519 + | FtsH peptidase Synpcc7942_0999 1007880 - 1007581 - | hypothetical protein TERM 570 1008116 - 1008088 - R 87 -4.6 -5.18357 | gap 1, opp_overlap 1008088 TAATGCATTAAAAAA GTCCCAGAA-TCT CTTG AGAACTCAGGGAC TTTTTGCTGTAGCCT Synpcc7942_1000 1011369 - 1008139 - | hypothetical protein TERM 571 1010676 - 1010653 - G 76 -5.2 -4.70266 | gap 1 AACATTATTCAAAAA GCCCGTGGTCC AGT AG-CCACTGGC ATCAGTGCTGCCCAA TERM 572 1011429 - 1011413 - R 70 -7.3 -4.04397 | AGCCGCACAAAAACA CTCCATA AGT CATGGAG ACTGAACCCCTGAGT Synpcc7942_1001 1013736 - 1011886 - | aspartate kinase Synpcc7942_1002 1013888 - 1014316 + | photosystem I reaction center subunit II TERM 573 1014346 - 1014365 + F 100 -10 -4.98531 | TTTATACAAGTTTGA GGGAAGTC TTCG GGCTTCCC TTTTTCGTTTACGGC Synpcc7942_1003 1014434 - 1015987 + | anthranilate synthase, component I Synpcc7942_1004 1016316 - 1015963 - | hypothetical protein Synpcc7942_1005 1016315 - 1016944 + | HAD family hydrolase Synpcc7942_1006 1017044 - 1018123 + | TPR repeat-containing protein fumC 1020295 - 1018904 - | fumarate hydratase purU 1021186 - 1020332 - | formyltetrahydrofolate deformylase TERM 574 1021314 - 1021296 - R 85 -6.6 -4.84359 | opp_overlap 1021297, overlap 1021297 1021298 CGATTGCCAGAAAAA GCCGTGCC AAG GGCACGAT CTGTCACTTTATCAG TERM 575 1021313 - 1021297 - R 74 -10.1 -3.50133 | opp_overlap 1021297, overlap 1021296 1021298 GATTGCCAGAAAAAG CCGTGCC AAG GGCACGA TCTGTCACTTTATCA TERM 576 1021312 - 1021298 - R 73 -11.4 -2.69598 | opp_overlap 1021297, overlap 1021297 1021296 ATTGCCAGAAAAAGC CGTGCC AAG GGCACG ATCTGTCACTTTATC Synpcc7942_1009 1021950 - 1021351 - | XRE family transcriptional regulator Synpcc7942_1010 1022700 - 1021969 - | ribosomal large subunit pseudouridine synthase B Synpcc7942_1011 1023956 - 1022715 - | PAS/PAC sensor signal transduction histidine kinase Synpcc7942_1012 1024742 - 1023969 - | two component transcriptional regulator Synpcc7942_1013 1025625 - 1025389 - | hypothetical protein TERM 577 1025560 - 1025526 - G 74 -11.4 -3.37796 | overlap 1025545 TTCCACCAGCCACAA TCGCCGGAACCGCTGA TAA CCAGCGATCGCGACGA GTCGTGGGTAGGAAA Synpcc7942_1014 1028415 - 1025629 - | CheA signal transduction histidine kinase Synpcc7942_1015 1030937 - 1028418 - | methyl-accepting chemotaxis sensory transducer Synpcc7942_1016 1031435 - 1030953 - | CheW protein Synpcc7942_1017 1032458 - 1031697 - | hypothetical protein TERM 578 1032283 - 1032293 + g 71 -4.6 -4.66163 | TCATTAGGGATGCCG GCCG CCT TGGC TTTTTCGATCGCCGT Synpcc7942_1018 1032577 - 1033212 + | hypothetical protein Synpcc7942_1019 1033300 - 1034799 + | 4-alpha-glucanotransferase Synpcc7942_1020 1034796 - 1035746 + | O-succinylbenzoate synthase TERM 579 1036493 - 1036461 - g 73 -12.7 -2.66711 | opp_overlap 1036484, overlap 1036460 CGCAGAACCTACAAC TCCCGATCGCGCCTT GCT ACGGCGCGACCGAAA CGGCTGCTTTCATTA Synpcc7942_1021 1035731 - 1037074 + | O-succinylbenzoic acid--CoA ligase Synpcc7942_1022 1037837 - 1037049 - | hypothetical protein Synpcc7942_1023 1038086 - 1037841 - | hypothetical protein Synpcc7942_1024 1039098 - 1038106 - | hypothetical protein TERM 580 1038391 - 1038373 - G 75 -2.3 -5.05113 | GGCATACAAACAAAA GGCTAGG GCAGT CCCACCC AGACCGAGAAACGCG Synpcc7942_1025 1039168 - 1039638 + | TPR repeat-containing protein TERM 581 1039823 - 1039792 - T 77 -11.6 -3.2218 | opp_overlap 1039798, overlap 1039798 CGCAATAGTGATGAA CAAAAAGGCCAGCG CTGG CGCTGACCTTACTG ATTGAATGAAGTTGA TERM 582 1039817 - 1039798 - T 100 -11.4 -5.14163 | opp_overlap 1039798, overlap 1039792 AGTGATGAACAAAAA GGCCAGCG CTGG CGCTGACC TTACTGATTGAATGA Synpcc7942_1026 1041725 - 1039971 - | fibronectin binding protein-like Synpcc7942_1027 1041800 - 1042114 + | hypothetical protein Synpcc7942_1028 1043340 - 1042384 - | hypothetical protein TERM 583 1043394 - 1043411 + H 71 -9.1 -3.54424 | opp_overlap 1043394 CTTCTGTCCAGACAA CCGATCC ACCA GGGTCGG TTTCCCCAACTCCCA Synpcc7942_1029 1043944 - 1044858 + | branched-chain amino acid aminotransferase TERM 584 1044884 - 1044896 + F 71 -3.3 -4.78149 | overlap 1044880 TCCTCACCCCTGCCG CGCCA TGC TGCCG TTTTTGCGTTCTGAG TERM 585 1045463 - 1045446 - g 75 -6.3 -4.67234 | gap 1, overlap 1045449 ACGGAAGCGGAAAAA GAC-TGGC TGC GCCAAGTC CCGCCCCAGATTTTA Synpcc7942_1030 1044888 - 1046009 + | histidinol-phosphate aminotransferase Synpcc7942_1031 1046356 - 1046015 - | hypothetical protein Synpcc7942_1032 1046506 - 1047972 + | hypothetical protein TERM 586 1048363 - 1048380 + G 84 -3.4 -5.40474 | overlap 1048364 TTCTAGTCATGCGGG TGAGGT CGATCT ACCTCG TTTTTTTCAAGAGGT Synpcc7942_1033 1047992 - 1048948 + | hypothetical protein Synpcc7942_1034 1048952 - 1049815 + | transglutaminase-like Synpcc7942_1035 1050560 - 1049766 - | putative proteasome-type protease Synpcc7942_1036 1050754 - 1051257 + | hypothetical protein TERM 587 1052934 - 1052954 + G 73 -5.4 -4.58395 | opp_overlap 1052937, overlap 1052937 TCGCTCCAGCCCGAC CAACCCTA CGTTT TAGGGATG TTTTTAGGCGGTGCC Synpcc7942_1037 1051311 - 1053254 + | arginine decarboxylase Synpcc7942_1038 1053264 - 1053851 + | photosystem II oxygen-evolving complex 23K protein TERM 588 1053841 - 1053865 + T 76 -10.8 -3.35046 | gap 1, overlap 1053839 1053845 GCACCAATTCCAGTG GCGAGGGCTAG TGCT CTAGCCCT-GC TGTTTCACAGGCTAG TERM 589 1053845 - 1053862 + T 75 -11.3 -2.84325 | overlap 1053841 1053839 CAATTCCAGTGGCGA GGGCTAG TGCT CTAGCCC TGCTGTTTCACAGGC Synpcc7942_1039 1054353 - 1053877 - | hypothetical protein TERM 590 1055144 - 1055130 - g 71 -9.2 -3.71527 | overlap 1055115 1055131 CCGCAACTACTCAAA GCAGCG GCA CGCCGC TGGGAAACTGAATTG Synpcc7942_1040 1054722 - 1055279 + | hypothetical protein Synpcc7942_1041 1055621 - 1055349 - | hypothetical protein Synpcc7942_1042 1055645 - 1055980 + | hypothetical protein Synpcc7942_1043 1056622 - 1055969 - | hypothetical protein Synpcc7942_1044 1057462 - 1056740 - | thymidylate synthase complementing protein ThyX Synpcc7942_1045 1059114 - 1057543 - | amidase enhancer-like TERM 591 1059137 - 1059149 + H 72 -4.8 -4.70659 | opp_overlap 1059137 GAGACAGCAGCAAAT GCTC GAGCA GAGC TTTTTAAGTGTGACA Synpcc7942_1046 1059261 - 1059689 + | hypothetical protein TERM 592 1060179 - 1060194 + F 72 -4.7 -4.63932 | ATCATTGTTAAGAGT CTCTC ACAATC GAGAG TTTTCTTGAAGAATG Synpcc7942_1047 1060318 - 1060839 + | phycocyanin, beta subunit Synpcc7942_1048 1060891 - 1061382 + | phycocyanin, alpha subunit TERM 593 1061458 - 1061473 + F 70 -6.2 -4.19953 | CCTGCTCTCTTCCGG GCTTTT TTTT AAAAGC TTTTGGAGTTGAGTA TERM 594 1061987 - 1061972 - g 90 -9 -5.00616 | opp_overlap 1061972 1061971 1061962 TTCGGGCTCAAAAAA CGGTTG GTTT CAACCG CATTTTTCAGCTCTA Synpcc7942_1049 1061488 - 1062309 + | phycobilisome rod linker polypeptide TERM 595 1062479 - 1062456 - g 75 -11 -3.54029 | opp_overlap 1062453 CGCGACCAAGTACAA GCGGTAATCC GCGC GGTTTACCGC CAAGTGCTTGGCAAC Synpcc7942_1050 1062357 - 1063226 + | phycobilisome rod linker polypeptide Synpcc7942_1051 1063318 - 1063563 + | phycocyanin linker protein 9K TERM 596 1063625 - 1063663 + F 85 -10.3 -4.15833 | gap 1 CATCGAGCCCCCTAA GCCGCTTCCTTCCT-CGT TAAT GCGCAGGGATGAGGCGGC TTTTGCCATGCTGCT Synpcc7942_1052 1064073 - 1064594 + | phycocyanin, beta subunit Synpcc7942_1053 1064646 - 1065137 + | phycocyanin, alpha subunit TERM 597 1065161 - 1065186 + F 78 -11.1 -3.46102 | overlap 1065175 TGCTGCATTGTTCAA GCCCAGGTCTC TCAG GGGAGCTGGGC TTCCCTTTTTAAATC TERM 598 1065175 - 1065191 + F 95 -10.1 -4.67353 | overlap 1065161 AGCCCAGGTCTCTCA GGGGAGC TGG GCTTCCC TTTTTAAATCAGTGA Synpcc7942_1054 1065228 - 1066049 + | HEAT repeat-containing PBS lyase TERM 599 1066314 - 1066280 - g 75 -11.5 -3.44051 | gap 1, opp_overlap 1066284, overlap 1066293 TCTGGATGACTATAA CTACGGCGCA-AGAGC TTGG GCTCTGCGCGCCTTAG CTGGCATTGGAGAAC Synpcc7942_1055 1066056 - 1066679 + | phycocyanin alpha-subunit phycocyanobilin lyase Synpcc7942_1056 1066706 - 1067488 + | XRE family transcriptional regulator Synpcc7942_1057 1067527 - 1068558 + | thiamine-phosphate pyrophosphorylase Synpcc7942_1058 1068576 - 1068788 + | hypothetical protein Synpcc7942_1059 1068901 - 1069833 + | hypothetical protein TERM 600 1069865 - 1069887 + F 100 -11.2 -5.67063 | opp_overlap 1069858 CCAATCTATCCGCCA CCGGAGCCTC TAG GGGACTCCGG TTTTTTTGTGCTGGA Synpcc7942_1060 1070025 - 1072052 + | type I restriction-modification Synpcc7942_1061 1072278 - 1073213 + | hypothetical protein Synpcc7942_1062 1073253 - 1073480 + | hypothetical protein Synpcc7942_1063 1073494 - 1073742 + | hypothetical protein Synpcc7942_1064 1074007 - 1075368 + | type I restriction-modification Synpcc7942_1065 1075365 - 1078484 + | DEAD/DEAH box helicase-like Synpcc7942_1066 1078489 - 1078737 + | hypothetical protein Synpcc7942_1067 1078734 - 1079282 + | hypothetical protein Synpcc7942_1068 1079478 - 1080773 + | branched-chain alpha-keto acid dehydrogenase subunit E2 TERM 601 1080796 - 1080822 + T 100 -13.8 -5.13741 | ACGCACTGCGTTGGC CGGATCTGGGTG ACT TACTCAGATCCG TTTTTATTGGCTTCG Synpcc7942_1069 1081727 - 1080999 - | hypothetical protein Synpcc7942_1070 1082851 - 1081730 - | oxidoreductase aldo/keto reductase Synpcc7942_1071 1083713 - 1083147 - | hypothetical protein TERM 602 1083482 - 1083524 + g 77 -11.2 -3.62572 | TCAAATCGTGGGTGA GCGGTCGCGGCGGTGTTTGA TTC TCTAGCACCGCTAGGATCGC TTTGGCCTGATCCTG Synpcc7942_1072 1084322 - 1083771 - | cob(I)yrinic acid a,c-diamide adenosyltransferase rph 1084451 - 1085167 + | ribonuclease PH Synpcc7942_1074 1085562 - 1085257 - | hypothetical protein Synpcc7942_1075 1086433 - 1085645 - | hypothetical protein TERM 603 1086557 - 1086530 - R 93 -12 -4.25104 | CTGCCTCGACCAAAA TCCCCTGCAGCC AAAG GACCACAGGGGA CTAATAATCAATCGC Synpcc7942_1076 1086997 - 1086581 - | osmotic signal transduction related protein Synpcc7942_1077 1087327 - 1087638 + | hypothetical protein TERM 604 1088353 - 1088339 - g 78 -4.2 -5.00616 | GTCTGCTCGAAAAAA TGGGGA TTA TCCGCA GCGGCATTCCGCCCC TERM 605 1088639 - 1088664 + G 85 -11.9 -3.91911 | gap 1, opp_overlap 1088630 1088629, overlap 1088640 AACAACGCCAGGCGA TCGCTCAAGCGG AAG CCGCTTG-GCGG TTTGCTTGGAATCAG TERM 606 1088640 - 1088663 + G 75 -13.2 -2.94825 | gap 1, opp_overlap 1088630 1088629, overlap 1088639 ACAACGCCAGGCGAT CGCTCAAGCGG AAG CCGCTTG-GCG GTTTGCTTGGAATCA Synpcc7942_1078 1087780 - 1088688 + | hypothetical protein TERM 607 1089327 - 1089339 + G 74 -4.7 -4.7254 | overlap 1089328 TGGCAGTGGTCAGCT CCGGC TCA GCCGC TTTTTCATGGGAACT TERM 608 1090564 - 1090549 - g 76 -4 -4.88736 | gap 1, overlap 1090550 1090551 GAGGAGTCAGAAAAA CTCGATC TGC GATCG-G CGATCGAAGAATATC Synpcc7942_1079 1088698 - 1091151 + | ATP-dependent DNA helicase RecG TERM 609 1091478 - 1091499 + F 76 -3.7 -4.91084 | opp_overlap 1091481, overlap 1091481 TATTAGATCGATGAA TAACGGTTG GACA CAATCGGTA TTTTTAAGTTTTATT TERM 610 1092196 - 1092207 + G 75 -5.8 -4.57569 | overlap 1092165 CTTGTGAAACTGTTG GAGC GATC GCTC TTTTTACCCCGCTCA Synpcc7942_1080 1091781 - 1093124 + | K+ transporter Trk Synpcc7942_1081 1093131 - 1093832 + | hypothetical protein TERM 611 1095863 - 1095877 + G 79 -2.1 -5.26875 | gap 1 GACGGGCGAGGGCTA TGTGCC AGCG GGC-CA TTTTTTGATTGGGGG Synpcc7942_1082 1094751 - 1097516 + | ATPase, E1-E2 type Synpcc7942_1083 1097799 - 1099175 + | glycosyltransferase Synpcc7942_1084 1099628 - 1099185 - | hypothetical protein TERM 612 1100138 - 1100122 - g 76 -5 -4.7497 | overlap 1100124 CGCATCTACGAAAAA CTGGGG GCTCA CCCCTG CGAGCTTGAAAACGT Synpcc7942_1085 1099720 - 1102044 + | glycogen branching enzyme hemE 1102104 - 1103168 + | uroporphyrinogen decarboxylase Synpcc7942_1087 1103190 - 1104164 + | hypothetical protein Synpcc7942_1088 1104193 - 1104570 + | plastocyanin TERM 613 1104605 - 1104626 + F 100 -10.9 -4.73388 | opp_overlap 1104605 CGATTGTTCTCAACA GCCTCTACT GCAG AGTAGGGGC TTTTTACTGGCGATT TERM 614 1104783 - 1104773 - g 70 -3.2 -4.68424 | CAATTTACTGAAAAA GCCT GGG AAGC GATCGTTCGCACAAC TERM 615 1104837 - 1104847 + G 76 -5.4 -4.68506 | ATCAGCAAATTGAAT CAGA ACA TCTG TTTTTGGCCTTGCTT Synpcc7942_1089 1104710 - 1107361 + | ATPase TERM 616 1107419 - 1107391 - T 100 -13.3 -4.43477 | opp_overlap 1107391 TTGAGCGAAGTAAAA GCCTGTAATCC ACGATCG GGATTACAGGC TTTCTGTTGAATATA TERM 617 1107391 - 1107419 + T 100 -13.3 -4.22678 | opp_overlap 1107391 TTGAGCGAAGTAAAA GCCTGTAATCC ACGATCG GGATTACAGGC TTTCTGTTGAATATA Synpcc7942_1090 1108274 - 1107477 - | hypothetical protein Synpcc7942_1091 1108372 - 1109535 + | hypothetical protein TERM 618 1109916 - 1109898 - T 79 -3.9 -5.13344 | gap 1, opp_overlap 1109900, overlap 1109901 ACAGCAACAGAAAAA TGA-GGCT CAGC AGCCATCA ATTCAGTTTCAAACC TERM 619 1109941 - 1109978 + T 72 -6.3 -4.43501 | overlap 1109944 1109962 1109964 CAAACCCATCTAACA TTGGCCAGCTTTTTGTT TTAG GACAATTAGCTGGCTGA TTTTATGAGTCGATT Synpcc7942_1092 1110663 - 1110004 - | hypothetical protein anmK 1111780 - 1110644 - | anhydro-N-acetylmuramic acid kinase Synpcc7942_1094 1112535 - 1111918 - | TenA family transcriptional activator TERM 620 1111977 - 1112019 + g 74 -11.3 -3.37796 | gap 1 GTGCGTAGGTATAGG GTTCTGCTGCGATCGCCTCG GTCC CATGGCGATCG-AGCAGGGC TTCTAGCTGCTGGGC Synpcc7942_1095 1112853 - 1113278 + | hypothetical protein TERM 621 1113315 - 1113287 - T 100 -16.1 -4.24342 | opp_overlap 1113283 1113279, overlap 1113309 GCGGTGATCAAGAAA TCGCTCCCCCAGT GCC ACTAGAGGAGCGA TCGCTCAATTCTAAT Synpcc7942_1096 1114724 - 1113354 - | thiamine biosynthesis protein ThiC Synpcc7942_1097 1114822 - 1114947 + | hypothetical protein Synpcc7942_1098 1116258 - 1115020 - | hypothetical protein ubiE 1116962 - 1116261 - | ubiquinone/menaquinone biosynthesis methyltransferase dnaA 1118551 - 1117103 - | chromosomal replication initiation protein TERM 622 1118056 - 1118072 + g 79 -12.3 -3.67597 | opp_overlap 1118054 CGATCGCCAAGGATG CCGCATG GGC CATGCGG TTGTTGGCTCCCACC Synpcc7942_1101 1118661 - 1119818 + | PDZ/DHR/GLGF TERM 623 1120115 - 1120125 + G 70 -3.2 -4.7497 | CACCAAAGTCAGCCG GTGG TGA TCAC TTTTTACTCAGTAAA Synpcc7942_1102 1119830 - 1120258 + | hypothetical protein Synpcc7942_1103 1121054 - 1120323 - | glucosamine-6-phosphate isomerase 2 TERM 624 1120630 - 1120608 - G 74 -11.2 -3.35813 | GCTCAGTTGAACCAA GCGCACGCGA CTC TCGCGAGCAC TACCCGGTTCATTGA Synpcc7942_1104 1122417 - 1121152 - | cell division protein FtsW Synpcc7942_1105 1123534 - 1122449 - | MRP protein-like Synpcc7942_1106 1124148 - 1123678 - | hypothetical protein Synpcc7942_1107 1125089 - 1124289 - | TPR repeat-containing protein TERM 625 1125487 - 1125501 + G 70 -10 -3.43619 | overlap 1125487 1125491 1125492 GAGGCAGTCTCTGGC GGTGAC AAA GTCACC TTGGTTGGCTTTGGT Synpcc7942_1108 1125373 - 1125648 + | nucleoid protein Hbs TERM 626 1125661 - 1125637 - f 70 -7.1 -4.05446 | opp_overlap 1125636, overlap 1125638 CTCTTTAAGGAGAAA GTCAGCACCTA GGA TGGGTGCTGAA ATGCCTTGACCCGAC TERM 627 1125660 - 1125638 - f 72 -10.6 -3.02946 | opp_overlap 1125636, overlap 1125637 TCTTTAAGGAGAAAG TCAGCACCTA GGA TGGGTGCTGA AATGCCTTGACCCGA TERM 628 1125709 - 1125736 + G 85 -12 -4.0257 | gap 1, opp_overlap 1125693 1125684 CTGCGCTGGGCTGCT GGCCTAGCTGGGG CTT CCCCAGCT-GACC TTCTTGATTTTTCAG Synpcc7942_1109 1125667 - 1126740 + | threonine-phosphate decarboxylase Synpcc7942_1110 1126901 - 1127527 + | response regulator receiver domain-containing protein TERM 629 1127750 - 1127764 + T 76 -7.8 -4.25256 | GAAGCAGCGATCGCA GCGGGT AGA ACTCGC TTATTTTGATCACGG Synpcc7942_1111 1129447 - 1127864 - | serine/threonine protein kinase Synpcc7942_1112 1130385 - 1129444 - | ribosomal large subunit pseudouridine synthase D TERM 630 1129876 - 1129886 + g 79 -8.2 -4.39002 | opp_overlap 1129865 1129863, overlap 1129874 CACACCCAGATATTC CCGC TGG GCGG TTTTCTGGCGGATTT Synpcc7942_1113 1131473 - 1130382 - | hypothetical protein rbgA 1132343 - 1131480 - | ribosomal biogenesis GTPase TERM 631 1131979 - 1131995 + g 77 -12.3 -3.33696 | opp_overlap 1131962 1131959 ACTGCGCGTACCGCG CGGGGAA GCA TTCCCCG TTGCTTGCGGCGAGC Synpcc7942_1115 1132720 - 1132340 - | hypothetical protein TERM 632 1133770 - 1133751 - g 77 -2.8 -5.11112 | gap 1, overlap 1133752 1133753 AAAGCGCAAGAAAAA GGCGTGCAA CTG TTGCT-GCC CGTGGATGTAGTAGT pgk 1132968 - 1134176 + | phosphoglycerate kinase TERM 633 1134218 - 1134239 + F 100 -14.5 -5.60993 | GTTCCTTTGACTGAG CAGCCTTGC GATC GCAAGGCTG TTTTTTTATGACCGG Synpcc7942_1117 1134381 - 1135043 + | hypothetical protein Synpcc7942_1118 1136614 - 1135064 - | mercuric reductase Synpcc7942_1119 1137294 - 1136617 - | hypothetical protein TERM 634 1137054 - 1137041 - G 75 -2.3 -5.14563 | overlap 1137044 CGCCCGATCAAAAAA GCAGC GATC GCTCC AAGCGTGGCCCCAAC TERM 635 1137156 - 1137146 - G 79 -6.8 -4.71426 | GCGCCAGGAACAAAA GCGA TCG TCGC AATGGCATAGAAACC TERM 636 1137470 - 1137456 - R 71 -2.8 -4.77036 | opp_overlap 1137456 TGCTACCAGCAAAAA TCTTGA CAG TCTAGA TCTCTGTATCTATTA TERM 637 1137584 - 1137541 - R 100 -15.6 -3.57792 | opp_overlap 1137544 1137547, overlap 1137544 1137547 GGACGCAGGCCCAAA GAACAACTCCAAGGTC TTTCCGTGTTTC GACCTTGGAGTTGTTC TGAGCGTTCACTCCT TERM 638 1137581 - 1137544 - R 90 -11.5 -3.92542 | opp_overlap 1137544 1137547, overlap 1137541 1137547 CGCAGGCCCAAAGAA CAACTCCAAGGTC TTTCCGTGTTTC GACCTTGGAGTTG TTCTGAGCGTTCACT TERM 639 1137544 - 1137581 + r 80 -11.5 -3.3344 | opp_overlap 1137544 1137541 1137547, overlap 1137547 CGCAGGCCCAAAGAA CAACTCCAAGGTC TTTCCGTGTTTC GACCTTGGAGTTG TTCTGAGCGTTCACT TERM 640 1137578 - 1137547 - R 74 -7.4 -4.08958 | opp_overlap 1137547 1137544, overlap 1137544 1137541 AGGCCCAAAGAACAA CTCCAAGGTC TTTCCGTGTTTC GACCTTGGAG TTGTTCTGAGCGTTC Synpcc7942_1120 1138015 - 1137860 - | hypothetical protein Synpcc7942_1121 1140623 - 1138464 - | serine/threonine protein kinase TERM 641 1139346 - 1139311 - G 73 -5.5 -4.52669 | gap 1, opp_overlap 1139322 1139323, overlap 1139283 1139313 AACAACTCAAAGAAA GCCGGATCAACTTGCA TGGCT TGCA-GTTGATTCGCC AACTCGGCCCGCTGC TERM 642 1140927 - 1140911 - g 100 -10.1 -4.88736 | CACCACGCAGAAAAA CCGTCGC AAC ACGACGG AACGGCTAGAAATCA rpmG 1140801 - 1140995 + | 50S ribosomal protein L33 rpsR 1141051 - 1141266 + | 30S ribosomal protein S18 TERM 643 1141315 - 1141342 + G 100 -14.2 -4.21194 | ACGCTGATTGAGTTT CGCCTAGGTGGT CAAC GCCACTTAGGCG TTTTGGATCGTCCAG TERM 644 1141750 - 1141738 - g 71 -4.7 -4.56775 | ATCGCTGCTGAAAAA GCCCG ACT CTGGC AAAACTTTCTCGATC Synpcc7942_1124 1141288 - 1143300 + | exoribonuclease II Synpcc7942_1125 1143397 - 1144332 + | CheA signal transduction histidine kinase Synpcc7942_1126 1145223 - 1144390 - | ABC transporter permease protein Synpcc7942_1127 1145373 - 1146842 + | microcin-processing peptidase 2 TERM 645 1146875 - 1146916 + F 82 -11.7 -3.48924 | gap 1, opp_overlap 1146874, overlap 1146878 TGCAATGTTAGATAT CGACCCGTAGTTCATGACGT CTA GC-TCATGCACTGCGGGTTG TTCTATAGAGGCTAA TERM 646 1146878 - 1146913 + F 81 -9.8 -3.88232 | gap 1, opp_overlap 1146874, overlap 1146875 AATGTTAGATATCGA CCCGTAGTTCATGACGT CTA GC-TCATGCACTGCGGG TTGTTCTATAGAGGC TERM 647 1147378 - 1147392 + G 76 -3.5 -4.91109 | overlap 1147371 1147370 GATTACTTCTGCTCA GCAGC TCTAT GTTGC TTTTTATGGTCGGCC Synpcc7942_1128 1147349 - 1148437 + | hypothetical protein Synpcc7942_1129 1148540 - 1149388 + | hypothetical protein Synpcc7942_1130 1149445 - 1151259 + | protein serine/threonine phosphatase TERM 648 1151583 - 1151626 + G 74 -3.3 -4.90013 | overlap 1151585 TTCCAATAAGTTTCG TGCACATTTACGTGACTTC GAGCTA GAGGTCATCTAAATATGTA TTTTTGATTGGCTTC Synpcc7942_1131 1151398 - 1151619 + | ferredoxin-thioredoxin reductase variable subunit Synpcc7942_1132 1153373 - 1151670 - | hypothetical protein Synpcc7942_1133 1155559 - 1153415 - | bacteriocin-processing peptidase TERM 649 1154648 - 1154633 - G 85 -4.6 -5.31877 | overlap 1154634 AGTCACGACAAAAAA TGCGGC AATC GCTGCA GCTGTCAAAATTGAG TERM 650 1155293 - 1155283 - G 73 -5.4 -4.52589 | TTTGGCCATATAAAA TCAC CCA GTGA TAACCCTTCCAGTGG Synpcc7942_1134 1155962 - 1155654 - | hypothetical protein TERM 651 1156388 - 1156355 - R 80 -12 -3.29385 | opp_overlap 1156354 1156360, overlap 1156360 AAAGTGAAGGAGTAA TGAAATGCTCATCA ACTCTG TAATGAGCATTTCA CTATGTCAGCCTAGT Synpcc7942_1135 1157931 - 1157413 - | cation transporter TERM 652 1158394 - 1158408 + G 75 -12.8 -2.93723 | overlap 1158390 ACTACCGCCTCGATC GCCCGC AGC GCGGGC TCTACTTCATCCAGC TERM 653 1158756 - 1158738 - g 76 -6.6 -4.60487 | TATTACGTCGAAAAA GGCCGCGA AGA TCAGGGCC TGCGCACCATGGGCA TERM 654 1160318 - 1160331 + G 73 -8.1 -4.09739 | GGGTCAAACAGACGC CGCGA TCGC TCGCG TTTTAGCCACATTGC Synpcc7942_1136 1158027 - 1160624 + | HEAT repeat-containing PBS lyase TERM 655 1160654 - 1160682 + T 100 -9.6 -5.47218 | gap 1, overlap 1160681 CAGTGATTTAAGACT GCGATCG-CTCGG ATAT CTGGGGCGATCGC TTTTTTTCGGTAACA TERM 656 1160735 - 1160705 - T 100 -3.3 -6.09888 | gap 1, opp_overlap 1160681 CGGTAACAAAAAAAA GCTCTCGTCGCAGT GTGA ACCT-GACAAGAGC TTTTTGACTTTCAGT Synpcc7942_1137 1161508 - 1160762 - | hypothetical protein Synpcc7942_1138 1161580 - 1162590 + | hypothetical protein Synpcc7942_1139 1164235 - 1162565 - | hypothetical protein TERM 657 1162609 - 1162627 + g 71 -8.8 -3.73534 | CTGCTAACTGCTGTT GCAGAGCG GCG CGATCTGC TTGTTGCTGACGTTG TERM 658 1163479 - 1163498 + g 79 -10 -4.14392 | ACTGCCGCCGTTGTT CTTGCAGC GCCT GCTGCAGG TTTTCCAGATTGCCA Synpcc7942_1140 1166107 - 1164350 - | hypothetical protein Synpcc7942_1141 1166812 - 1166126 - | hypothetical protein Synpcc7942_1142 1166949 - 1168526 + | methionyl-tRNA synthetase TERM 659 1168550 - 1168562 + F 90 -6.9 -5.05782 | overlap 1168549 CTGTTTAATGAGGGG GCGGT TTT GCCGC TTTTTTAAAATCCCT Synpcc7942_1143 1168605 - 1169201 + | hypothetical protein Synpcc7942_1144 1169424 - 1170455 + | hypothetical protein TERM 660 1170675 - 1170642 - T 100 -11.9 -5.38047 | opp_overlap 1170641, overlap 1170644 1170660 TATGCAGACAAAAAA TATCAGGATGACTGA GAAC TCAATCATCCTGATC GTGATGTTGGAGTGA TERM 661 1170673 - 1170644 - T 100 -14.5 -4.31943 | opp_overlap 1170641, overlap 1170642 1170660 TGCAGACAAAAAATA TCAGGATGACTGA GAAC TCAATCATCCTGA TCGTGATGTTGGAGT Synpcc7942_1145 1171169 - 1170843 - | glutaredoxin-like protein Synpcc7942_1146 1171481 - 1171215 - | hypothetical protein Synpcc7942_1147 1172278 - 1171571 - | hypothetical protein TERM 662 1171619 - 1171600 - G 71 -7.8 -4.13014 | CCGAGAGCCCTAAAA CTTGGTGC AGTT GCCCCAAG AGTTGCGCCAGACAT Synpcc7942_1148 1172695 - 1173912 + | metal dependent phosphohydrolase Synpcc7942_1149 1174890 - 1173913 - | dTDP-glucose 46-dehydratase Synpcc7942_1150 1175734 - 1175078 - | hypothetical protein Synpcc7942_1151 1177466 - 1175883 - | bifunctional pantoate ligase/cytidylate kinase TERM 663 1177644 - 1177607 - R 82 -11.3 -3.53298 | opp_overlap 1177603, overlap 1177603 1177609 1177610 ACCAGTCCAAATCAA CAGCGTGACAGGACTCC CTTA GGAATCCTGCCACGTTC GGGGGATTGATCGCT TERM 664 1177642 - 1177609 - R 95 -13.9 -3.33865 | opp_overlap 1177603, overlap 1177607 1177603 1177610 CAGTCCAAATCAACA GCGTGACAGGACTCC CTTA GGAATCCTGCCACGT TCGGGGGATTGATCG TERM 665 1177641 - 1177610 - R 100 -17.4 -2.59837 | opp_overlap 1177603, overlap 1177609 1177607 1177603 AGTCCAAATCAACAG CGTGACAGGACTCC CTTA GGAATCCTGCCACG TTCGGGGGATTGATC Synpcc7942_1152 1178677 - 1177670 - | rare lipoprotein A TERM 666 1178765 - 1178786 + r 70 -5.1 -4.34267 | gap 1 CAAAGGGGAGTGACC GACTC-GTCG TAA CGGCAGGGTC TTTTGACTTCTCTAG Synpcc7942_1153 1181139 - 1179295 - | hypothetical protein Synpcc7942_1154 1182443 - 1181136 - | hypothetical protein TERM 667 1183026 - 1183004 - g 78 -13.4 -3.19389 | opp_overlap 1183025 GAACCGATTCAGCAA GCAGCGATCG CCC CGATCGCAGC CCGCAGTGAGTGGGC Synpcc7942_1155 1182479 - 1183195 + | hypothetical protein TERM 668 1185797 - 1185783 - g 78 -5.7 -4.68994 | AGCACGACGCAAAAA GTCTG GGATA CAGAC CAGAAATTGAAACTG Synpcc7942_1156 1183497 - 1186094 + | hypothetical protein Synpcc7942_1157 1186081 - 1189266 + | hypothetical protein Synpcc7942_1158 1192448 - 1189305 - | diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) Synpcc7942_1159 1193292 - 1192792 - | MarR family transcriptional regulator TERM 669 1193344 - 1193363 + H 78 -9.4 -3.86822 | opp_overlap 1193347 TCGCCTTTACCTTAA CTATCTTG ATAT CAAGATAG TTTCTGGGCGAGTTC Synpcc7942_1160 1193397 - 1194299 + | hypothetical protein Synpcc7942_1161 1194348 - 1194842 + | hypothetical protein Synpcc7942_1162 1194846 - 1195301 + | hypothetical protein Synpcc7942_1163 1195317 - 1196492 + | hypothetical protein TERM 670 1198168 - 1198156 - g 89 -6.3 -5.29716 | GGAAGAGAAGAAAAA TCACA AAA TGTGA GTTGAAATATATTCT Synpcc7942_1164 1197417 - 1198841 + | hypothetical protein Synpcc7942_1165 1199239 - 1198844 - | hypothetical protein TERM 671 1199886 - 1199872 - g 70 -10 -3.53224 | TACCGTCGCGGCAAA GATCGC TAT GCGATC GATCGGGCTGCAGCT Synpcc7942_1166 1199437 - 1200762 + | hypothetical protein Synpcc7942_1167 1201330 - 1200773 - | hypothetical protein Synpcc7942_1168 1202109 - 1201327 - | circadian phase modifier CpmA Synpcc7942_1169 1203865 - 1202102 - | oligopeptide-binding protein of oligopeptide ABC transporter TERM 672 1203831 - 1203819 - GR 72 -2.6 -4.96848 | overlap 1203820 1203821 GCCGCCAGACAAAAA GCCA GCCAG CGGC GGAGGCTAATCACGA ispF 1204319 - 1203837 - | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase Synpcc7942_1171 1206109 - 1204598 - | hypothetical protein TERM 673 1205558 - 1205532 - G 81 -4.2 -5.02074 | GCATCTGGCAAAAAA TGAGCAGCTGGC GGT GGCTGCAGCCCA GTTTTAGGAGGCTTA lnt 1207596 - 1206148 - | apolipoprotein N-acyltransferase Synpcc7942_1173 1207866 - 1209134 + | hypothetical protein TERM 674 1209207 - 1209178 - T 100 -13.7 -5.41143 | opp_overlap 1209181 1209206 GAGTGCCCAAAAAAA TAAGAGGCCCGAG CGAA CTCAGACCTCTTA CTGCTCCTGCAGGAT Synpcc7942_1174 1209343 - 1209224 - | photosystem II reaction center protein J Synpcc7942_1175 1209546 - 1209424 - | photosystem II protein L Synpcc7942_1176 1209693 - 1209559 - | cytochrome b559 subunit beta Synpcc7942_1177 1209966 - 1209715 - | cytochrome b559 subunit alpha Synpcc7942_1178 1211080 - 1210031 - | Ycf48-like protein TERM 675 1210884 - 1210894 + g 71 -6.8 -4.2704 | TCGGTGCCCACCAGC CAGC CGT GCTG TTTGTTGCTGGTAAA Synpcc7942_1179 1211529 - 1211113 - | rubredoxin TERM 676 1211661 - 1211618 - H 100 -14 -3.76568 | gap 1, opp_overlap 1211613 CGAGGTAGAACATAA GCGATCGCAATCCTTCTGACT GCG AGTCA-AGGGACAGCGATCGC TACAGTAGATTAGGC Synpcc7942_1180 1211703 - 1212104 + | NADH dehydrogenase subunit A Synpcc7942_1181 1212095 - 1212802 + | NADH dehydrogenase subunit B Synpcc7942_1182 1212795 - 1213313 + | NADH dehydrogenase subunit J Synpcc7942_1183 1213480 - 1214214 + | hypothetical protein TERM 677 1214919 - 1214899 - g 73 -8.3 -4.1891 | opp_overlap 1214900 GTGGTGCAAGACAAA GTGGTCGAA CCG TTCGATCAC AGCTTCCTCAACAAG Synpcc7942_1184 1214239 - 1215141 + | 6-pyruvoyl-tetrahydropterin synthase-like protein Synpcc7942_1185 1215373 - 1215648 + | hypothetical protein Synpcc7942_1186 1215652 - 1216350 + | putative riboflavin-specific deaminase TERM 678 1217385 - 1217362 - g 89 -5.9 -5.28176 | GGGAGTCATAAAAAA CGGCGTGGC TTTCCG GCAACACCG AACTGGAGCTTACAC Synpcc7942_1187 1216357 - 1217532 + | hypothetical protein Synpcc7942_1188 1217650 - 1218042 + | AP-4-A phosphorylase II-like protein Synpcc7942_1189 1218630 - 1218046 - | molybdopterin-guanine dinucleotide biosynthesis protein A Synpcc7942_1190 1220180 - 1218720 - | leucyl aminopeptidase gmk 1220349 - 1220900 + | guanylate kinase Synpcc7942_1192 1221583 - 1220990 - | hypothetical protein Synpcc7942_1193 1222398 - 1221676 - | phospholipid/glycerol acyltransferase Synpcc7942_1194 1222698 - 1223495 + | pyridoxal phosphate biosynthetic protein PdxJ Synpcc7942_1195 1223721 - 1224221 + | hypothetical protein Synpcc7942_1196 1224298 - 1224534 + | hypothetical protein trpC 1225728 - 1224841 - | indole-3-glycerol-phosphate synthase Synpcc7942_1198 1227244 - 1225805 - | dihydrolipoamide dehydrogenase Synpcc7942_1199 1228007 - 1227303 - | tRNA/rRNA methyltransferase Synpcc7942_1200 1229061 - 1228048 - | hypothetical protein Synpcc7942_1201 1230508 - 1229078 - | glycosyltransferase Synpcc7942_1202 1232980 - 1230512 - | hypothetical protein TERM 679 1231879 - 1231858 - G 70 -10.9 -3.28791 | AGCGGCGCGGCAGAA CCGTTGGTA GAGT CACCAACGG CACGATCAGGCTGGG TERM 680 1232407 - 1232376 - G 70 -10.1 -3.53855 | overlap 1232372 CGGGTTAAAAAGACA GCCGCGATCGCTA TCCCAC TCGCGATCGCTGC ACCCAGTCTTCGCTT Synpcc7942_1203 1233463 - 1233050 - | hypothetical protein Synpcc7942_1204 1233774 - 1233460 - | prevent-host-death protein Synpcc7942_1205 1233775 - 1233939 + | phage_integrase-like Synpcc7942_1206 1233936 - 1234211 + | hypothetical protein Synpcc7942_1207 1234601 - 1234338 - | addiction module toxin, Txe/YoeB Synpcc7942_1208 1234848 - 1234594 - | prevent-host-death protein TERM 681 1234796 - 1234813 + g 83 -3.5 -5.26316 | gap 1 TCGTTGACGACTTCA TC-CAAGA CAG TCTTGAGA TTTTTTCTGGCGTCA Synpcc7942_1209 1235230 - 1234970 - | hypothetical protein Synpcc7942_1210 1235481 - 1235233 - | hypothetical protein Synpcc7942_1211 1235825 - 1235481 - | molybdopterin-guanine dinucleotide biosynthesis protein A TERM 682 1235848 - 1235863 + r 70 -6.8 -4.07568 | CTCCAGTGGTTCGAT CGCTTC TAGG GGAGCG TTTTGGCGGGCAAGC Synpcc7942_1212 1236090 - 1235830 - | hypothetical protein Synpcc7942_1213 1236470 - 1236886 + | virulence associated protein C Synpcc7942_1214 1237017 - 1237520 + | glutathione peroxidase TERM 683 1238320 - 1238290 - g 74 -11.2 -3.30771 | GCAGATTGCCGAGAA GTTCTAACTGCCCA ACT TGGGCAACTCGAAC AGGCGATCGCTCAAG Synpcc7942_1215 1237546 - 1238553 + | acyl-CoA dehydrogenase family protein-like Synpcc7942_1216 1240109 - 1238550 - | circadian clock protein KaiC TERM 684 1238591 - 1238602 + g 72 -5.8 -4.46212 | overlap 1238573 1238572 CGCCGCGCACAATTC GCGA GAGT TCGC TTTTCTCATCGACGG TERM 685 1238963 - 1238928 - G 73 -8.3 -4.09215 | GACACCAATTACAAA TTGGCGGAAGGCATT GTTGCT AACGCCCCGCGCCAA AGCAGAGAGGGAGTC Synpcc7942_1217 1240467 - 1240159 - | circadian clock protein KaiB Synpcc7942_1218 1241411 - 1240557 - | circadian clock protein KaiA rplU 1241649 - 1242032 + | 50S ribosomal protein L21 TERM 686 1242153 - 1242142 - g 78 -4.4 -5.00616 | CTCGGCGTCAAAAAA TTCG GTGG CGAA GTGGTGCGCTCGGGC rpmA 1242067 - 1242333 + | 50S ribosomal protein L27 TERM 687 1242382 - 1242354 - T 100 -14 -4.3953 | gap 1, opp_overlap 1242354 1242349 GCGAACTAGAACAAA GGGGATC-GGACA TTAT TGTCCTGATCCCC TTCACTTTGTCTGCG TERM 688 1242354 - 1242382 + T 95 -14 -3.35695 | gap 1, opp_overlap 1242354, overlap 1242349 GCGAACTAGAACAAA GGGGATC-GGACA TTAT TGTCCTGATCCCC TTCACTTTGTCTGCG Synpcc7942_1221 1242832 - 1242455 - | response regulator receiver domain-containing protein truB 1242925 - 1243809 + | tRNA pseudouridine synthase B Synpcc7942_1223 1245008 - 1243830 - | DevC protein Synpcc7942_1224 1246092 - 1244992 - | ABC-transporter membrane fusion protein Synpcc7942_1225 1246927 - 1246181 - | phycocyanobilin:ferredoxin oxidoreductase TERM 689 1247034 - 1247045 + H 72 -5.8 -4.43501 | CTTGCGCCTCCGTGT GAGC CTTT GCTC TTTTGTAAATCCATT Synpcc7942_1226 1247104 - 1248369 + | processing protease radC 1249327 - 1248593 - | DNA repair protein RadC TERM 690 1250122 - 1250146 + G 84 -5 -5.14563 | gap 1 ACGGCTCAGCACCCT GATTGGCGTCG TCTA CGGCG-CAGTC TTTTTTGGTGAAAAG Synpcc7942_1228 1249355 - 1250224 + | hypothetical protein Synpcc7942_1229 1250987 - 1250193 - | precorrin-4 C11-methyltransferase Synpcc7942_1230 1251846 - 1250977 - | prolipoprotein diacylglyceryl transferase TERM 691 1251526 - 1251510 - G 70 -11.5 -3.00128 | overlap 1251507 GAGCAAAGAGAATCA GGGCGGC AGT ACCGCCC AAAATGGCGCCATGA TERM 692 1251901 - 1251879 - R 100 -13.4 -4.43283 | opp_overlap 1251879 1251881 CTATACAAATACAAA GAGGGCAAGC TAG GCCCGCCCTC TCTCTTGCAACCGTT Synpcc7942_1231 1252904 - 1251930 - | apocytochrome f Synpcc7942_1232 1253489 - 1252950 - | cytochrome b6-f complex iron-sulfur subunit Synpcc7942_1233 1254473 - 1253790 - | hypothetical protein TERM 693 1254926 - 1254954 + G 73 -5.2 -4.58395 | gap 1, overlap 1254928 CCTTCCTGATCATGG GAGCTGGACTGGC GATT GCCGGTCT-GCGC TTTTTGGGAGATAGC Synpcc7942_1234 1254739 - 1255242 + | hypothetical protein Synpcc7942_1235 1257946 - 1255757 - | assimilatory nitrate reductase (ferredoxin) precursor TERM 694 1256857 - 1256867 + g 71 -8.2 -3.90856 | CACCCGTTTCACGAC CGCC CAT GGCG TTTGGTTGGCCAGTT Synpcc7942_1236 1258968 - 1258144 - | nitrate transport ATP-binding subunits C and D Synpcc7942_1237 1260957 - 1258978 - | nitrate transport ATP-binding subunits C and D Synpcc7942_1238 1261811 - 1260972 - | nitrate transport permease Synpcc7942_1239 1263199 - 1261868 - | ABC-type nitrate/nitrite transport system substrate-binding protein TERM 695 1262379 - 1262395 + g 71 -4.4 -4.59773 | gap 1 TTGTCTGCCCAATCT GCGC-GA ATCG TCAGCGC TTTTTCGGGGTGGAA nirA 1264801 - 1263263 - | ferredoxin-nitrite reductase TERM 696 1264757 - 1264771 + g 74 -4.3 -4.68593 | TTCAAGTTTTAGCTT CTCAA ATTTA TTGAG TTTTTCAGTAGTAGC TERM 697 1265053 - 1265064 + H 72 -4.4 -4.6644 | overlap 1265060 1265063 CCCGCTTAGGTGGAG CCAT TAGC ATGG TTTTTAACCTGTATT TERM 698 1265965 - 1265940 - g 71 -8.3 -3.88291 | gap 1, opp_overlap 1265939, overlap 1265943 CAGCACCCCCACAAA CG-AGCGGCAAC CTT GTTGCTGCTGCG GTGGTTGCCCAACTG Synpcc7942_1241 1265088 - 1266137 + | nitrite reductase related protein Synpcc7942_1242 1266128 - 1267057 + | LysR family transcriptional regulator Synpcc7942_1243 1268117 - 1267422 - | cyclic nucleotide-binding domain-containing protein Synpcc7942_1244 1268365 - 1269663 + | ATPase Synpcc7942_1245 1270001 - 1270345 + | hypothetical protein TERM 699 1270449 - 1270473 + F 75 -5.7 -4.7078 | opp_overlap 1270448 GACGGTAGACCTAAT CTGTAGCTTTT GCC AAACGCAACAG TTTTTCAATAATTGA TERM 700 1270716 - 1270734 + F 100 -9.5 -5.66684 | CAGGATCGGCATTTG GGGCGGC GGTGG GTCGCCC TTTTTTTCTGCGTTG Synpcc7942_1246 1270803 - 1272317 + | carotene isomerase Synpcc7942_1247 1272322 - 1272561 + | hypothetical protein Synpcc7942_1248 1272551 - 1273123 + | hypothetical protein TERM 701 1273257 - 1273279 + T 100 -12 -4.64861 | opp_overlap 1273252 1273260, overlap 1273258 CAGCGAGGAAGTGGA AGAGGGAAGC ATT GCTTCCCTCA TTTATTTTGAGCAGG TERM 702 1273258 - 1273278 + T 100 -15.5 -3.38435 | opp_overlap 1273252 1273260, overlap 1273257 AGCGAGGAAGTGGAA GAGGGAAGC ATT GCTTCCCTC ATTTATTTTGAGCAG TERM 703 1273276 - 1273260 - T 79 -12.3 -3.10464 | opp_overlap 1273258 1273257, overlap 1273252 CGAGGAAGTGGAAGA GGGAAGC ATT GCTTCCC TCATTTATTTTGAGC TERM 704 1273563 - 1273589 + T 76 -10.8 -3.40071 | opp_overlap 1273563 GTCCATAAACGAAAA CCGGGCTCAGTC ATA GACTCAACCCGG TTCTAAGTGTCACTT TERM 705 1273589 - 1273563 - T 100 -13 -4.61873 | opp_overlap 1273563 GTCCATAAACGAAAA CCGGGCTCAGTC ATA GACTCAACCCGG TTCTAAGTGTCACTT Synpcc7942_1249 1273755 - 1273621 - | photosystem I reaction center subunit IX Synpcc7942_1250 1274260 - 1273781 - | photosystem I reaction center subunit III precursor TERM 706 1273890 - 1273869 - G 70 -5.2 -4.41895 | gap 1, overlap 1273870 1273872 1273883 AAGGGCCAAGCAAAA CCAGTCAAG GAAAA CTTGAC-GG CCAAGGGCACATCGA TERM 707 1274385 - 1274353 - H 100 -11.3 -4.93296 | opp_overlap 1274361, overlap 1274354 CCAGCAGTACAAAAA CTCGAAGACGAGCGC CAA GCACTCGTTTCCGAA TAGAATCAATCCCGA TERM 708 1274384 - 1274354 - H 86 -12.6 -3.55254 | opp_overlap 1274361, overlap 1274353 CAGCAGTACAAAAAC TCGAAGACGAGCGC CAA GCACTCGTTTCCGA ATAGAATCAATCCCG TERM 709 1274410 - 1274395 - H 71 -9 -3.54382 | opp_overlap 1274392 1274402 TCCGAATAGAATCAA TCCCGA AGCT TCGGGA AAGCTTTATCAGGAA Synpcc7942_1251 1274438 - 1275487 + | O-sialoglycoprotein endopeptidase TERM 710 1275671 - 1275686 + G 70 -5.4 -4.51097 | overlap 1275673 TCGTTCGCTATGCGA TTGACC CTAA GGTCGA TTTTGTGGTGATTGC TERM 711 1276572 - 1276582 + G 73 -5.4 -4.62336 | opp_overlap 1276572 1276571 1276575 GCTTCACCAACAAAG TCAG GCG CTGA TTTTTAACCTGCGCT Synpcc7942_1252 1275556 - 1276833 + | DNA repair protein RAD32-like Synpcc7942_1253 1277221 - 1276940 - | hypothetical protein Synpcc7942_1254 1277460 - 1277855 + | cyclic nucleotide-binding domain-containing protein Synpcc7942_1255 1279015 - 1277852 - | L-cysteine/cystine lyase Synpcc7942_1256 1279079 - 1279633 + | glutathione S-transferase TERM 712 1279732 - 1279760 + G 74 -11 -3.36694 | overlap 1279730 CAATCCGCCTGTCGG GCTGCACTGGAG CAATC CTCTGGTGCGGC TGTTTAGCCCTGAGT TERM 713 1280238 - 1280252 + G 78 -4.2 -4.94058 | CAGCTGGTTTTAATG CCCC GATCGCA GGGG TTTTCTTTGCCTTCG TERM 714 1280276 - 1280286 + G 71 -6.8 -4.25104 | overlap 1280271 GCCTTCGAAGTCGTG CTGG GCA CCAG TTTTGCTGGGGCAGC Synpcc7942_1257 1279685 - 1281532 + | chloride channel-like Synpcc7942_1258 1281532 - 1281945 + | hypothetical protein TERM 715 1282962 - 1282948 - g 71 -4.2 -4.59342 | TTTACTACAAAGAAA CTACTC TCC GAGTTG TCCAAAATGGCAGCG Synpcc7942_1259 1281993 - 1283171 + | arsenite-activated ATPase (arsA) Synpcc7942_1260 1283244 - 1284071 + | hypothetical protein TERM 716 1284149 - 1284171 + T 70 -10.6 -2.70932 | CCTCCAATGAGTGTG GGCTGTGATC TGA GATCAAAGCC TGATTACACCCAGCA tpiA 1285014 - 1284223 - | triosephosphate isomerase TERM 717 1284890 - 1284908 + g 76 -6.6 -4.54477 | opp_overlap 1284889 1284890, overlap 1284891 AAGGCTTGCAAGAAC TCCAGGGC TTC GGCCTGGG TTTTGTACATTTTCC Synpcc7942_1262 1286647 - 1285028 - | uncharacterized FAD-dependent dehydrogenase TERM 718 1286198 - 1286215 + g 78 -4.7 -5.00616 | TTGGGCATTAGATTC CGGGTTG AACT CGCCCCG TTTTTTCCAAAAGGC Synpcc7942_1263 1287835 - 1286711 - | N6-adenine-specific DNA methylase-like TERM 719 1288079 - 1288094 + G 72 -10.4 -3.51232 | overlap 1288046 1288073 1288075 GATTTGTCTGCTGGG GGCCAC GCTT GTGGCC TTGATTTCGCGGCGC Synpcc7942_1264 1287939 - 1289582 + | Na+/H+ antiporter Synpcc7942_1265 1290258 - 1289545 - | hypothetical protein Synpcc7942_1266 1290953 - 1290360 - | Ham1-like protein TERM 720 1290682 - 1290666 - G 74 -12.3 -3.14463 | AAGTTCGCGCAGCAA GCGATCG ATG CGATCGC GATCGCTATGGCCCC Synpcc7942_1267 1291729 - 1290950 - | hypothetical protein TERM 721 1291598 - 1291587 - G 72 -5.8 -4.37658 | AATTCCGCCAGAAAA CTGG CTCG CCAG GTCAGCTCACTCCAG Synpcc7942_1268 1293231 - 1291777 - | phosphoglucomutase TERM 722 1293055 - 1293041 - G 86 -5.6 -5.24129 | TCTTCTGACAAAAAA CGGCGA TCG TAGCCG ACCAAAATGCGGCGA Synpcc7942_1269 1293542 - 1294939 + | magnesium transporter Synpcc7942_1270 1295129 - 1295425 + | hypothetical protein Synpcc7942_1271 1296175 - 1295438 - | hypothetical protein Synpcc7942_1272 1296761 - 1296234 - | hypothetical protein Synpcc7942_1273 1296812 - 1298347 + | hypothetical protein Synpcc7942_1274 1299157 - 1298630 - | TPR repeat-containing protein TERM 723 1299056 - 1299069 + g 73 -8.1 -4.11484 | opp_overlap 1299055 GCGGCTGAAATCTAC CTCGG TGCG CCGAG TTTTCAGGACTTGGC Synpcc7942_1275 1300350 - 1299187 - | hypothetical protein TERM 724 1299797 - 1299784 - G 71 -4.5 -4.57073 | CACGTTCGTCAAAAA GAGCA GCAT TGCCC CGCCACTGGCTCGCA Synpcc7942_1276 1301163 - 1300381 - | extracellular solute-binding protein TERM 725 1300530 - 1300511 - G 79 -10 -4.13945 | ATCGCCAGTGGAAAA TCGCCCCA TTGC TGGGGCAA CAGCTGATAGCGATC TERM 726 1301114 - 1301095 - G 100 -10 -5.67063 | overlap 1301106 CGCACCATAAAAAAA GGACGCCA ATAC TGACGTCC CAAGAAGGAGCCAGC rplT 1301524 - 1301174 - | 50S ribosomal protein L20 rpmI 1301769 - 1301569 - | 50S ribosomal protein L35 TERM 727 1301618 - 1301659 + g 77 -3 -5.0916 | gap 3, opp_overlap 1301626 TCTTGGTCGGTCTCA TGCACAACCTCAG--GCTGGC TAA GCCGGCGTCTGCGGGTG-GCA TTTTTGTGTTGGAGC Synpcc7942_1279 1302047 - 1301796 - | hypothetical protein TERM 728 1301963 - 1301949 - G 72 -10 -3.55622 | overlap 1301911 1301910 CTCAACTCCCCCAAA GGACAG AGG CTGTCC AATCCGCACCAGCCA Synpcc7942_1280 1303138 - 1302044 - | hypothetical protein Synpcc7942_1281 1303836 - 1303144 - | hypothetical protein moaA 1305463 - 1304480 - | molybdenum cofactor biosynthesis protein A Synpcc7942_1283 1305957 - 1305460 - | molybdopterin synthase subunit MoaE Synpcc7942_1284 1306232 - 1305960 - | molybdopterin converting factor subunit 1 moaC 1307200 - 1306229 - | bifunctional molybdenum cofactor biosynthesis protein C/molybdopterin-binding protein TERM 729 1306727 - 1306714 - G 73 -8.1 -4.08216 | TCACCGTTGCGAAAA CGCCT GCTA AGGCG CCGGTTGGGGCTACA TERM 730 1307091 - 1307069 - G 80 -5.4 -4.8622 | TTGGGCAAGCAAAAA GCCATCGCCC TTG GGGAGTTGAC CTTGAGTAACGCGCT TERM 731 1308233 - 1308251 + G 74 -4.4 -4.72272 | overlap 1308235 GGGCAATCCTGTTTC CACAACCG TCA CGGCTGAG TTTTTCCTGAAACCC Synpcc7942_1286 1307304 - 1308515 + | molybdopterin molybdochelatase Synpcc7942_1287 1309030 - 1310862 + | VCBS TERM 732 1310910 - 1310930 + F 100 -11.9 -5.08601 | opp_overlap 1310921, overlap 1310921 AAAGGTTTACCTGAA CTCCTGCTA AAT TAGCGGGAG TTTTTCTTGCGCTAA Synpcc7942_1288 1311028 - 1311534 + | hypothetical protein TERM 733 1311614 - 1311594 - f 95 -9 -5.06414 | gap 1 TTTGGCCAAGAAAAA CCCCGC-CA TCGC TGAGCGGGG AAAAGCTTGGGTAGA Synpcc7942_1289 1311841 - 1313181 + | putative modulator of DNA gyrase TERM 734 1313256 - 1313220 - T 70 -7.2 -4.06687 | opp_overlap 1313224, overlap 1313224 ACCTCCTATAAATAA TCAACCGCTGGCCCAT GATTG AGGAGCCAGCGGTTTT CGATTGATGGGGGAT TERM 735 1313252 - 1313224 - T 88 -12.4 -3.65699 | opp_overlap 1313224, overlap 1313220 CCTATAAATAATCAA CCGCTGGCCCAT GATTG AGGAGCCAGCGG TTTTCGATTGATGGG TERM 736 1313224 - 1313252 + T 90 -10.2 -4.30014 | opp_overlap 1313224 1313220 CCTATAAATAATCAA CCGCTGGCCCAT GATTG AGGAGCCAGCGG TTTTCGATTGATGGG Synpcc7942_1290 1313460 - 1313290 - | SmtA metallothionein Synpcc7942_1291 1313561 - 1313929 + | ArsR family transcriptional regulator dnaG 1316023 - 1313939 - | DNA primase TERM 737 1315949 - 1315975 + g 73 -9.4 -3.97674 | opp_overlap 1315957 CAGCACGACTTGTTC CGAGACGATATC GAC GATATCGGCCCG TTCTTTGACTGCTGC pheT 1318598 - 1316166 - | phenylalanyl-tRNA synthetase subunit beta Synpcc7942_1294 1318734 - 1320302 + | serine/threonine protein kinase Synpcc7942_1295 1321758 - 1320370 - | phospholipid/glycerol acyltransferase Synpcc7942_1296 1321898 - 1322593 + | hypothetical protein TERM 738 1322655 - 1322682 + F 100 -6.3 -5.47821 | CAGAGCTGATCGCTG GACTCAAGGCT GTTTAA GGCTTTGGGTC TTTTTTTAGGTCAGT TERM 739 1323357 - 1323335 - g 74 -2.7 -4.88405 | gap 1, opp_overlap 1323341, overlap 1323338 AACGGTCAAACAAAA CAT-GGTGGC GATC GTCACCGATG GGACCGCCGTTCTTG TERM 740 1324243 - 1324263 + G 78 -12.5 -3.28712 | TTGATTCTCGTGTAG CGCCGGCTG TCG CAGCCGCCG TTGTCGAAGCAGCAC Synpcc7942_1297 1322910 - 1324319 + | malate dehydrogenase TERM 741 1324348 - 1324377 + F 95 -7.1 -5.24129 | overlap 1324349 CACTTTCAAACCTTT CTAGGCTCAGGGC GATC GCTTTGGGCCTAA TTTTTTGTAGGGCAG TERM 742 1324349 - 1324376 + F 84 -10.6 -3.73995 | overlap 1324348 ACTTTCAAACCTTTC TAGGCTCAGGGC GATC GCTTTGGGCCTA ATTTTTTGTAGGGCA TERM 743 1326588 - 1326610 + G 73 -8.4 -4.08216 | TCTTGCTTGTCGGTA TGGGGGCGAG GAG TTCGTCCTCA TTTTGCCAGGCATGG Synpcc7942_1298 1325107 - 1326837 + | diguanylate cyclase Synpcc7942_1299 1327854 - 1326892 - | hypothetical protein Synpcc7942_1300 1328093 - 1328662 + | hypothetical protein Synpcc7942_1301 1328678 - 1330141 + | ATP-dependent DNA helicase RecQ Synpcc7942_1302 1330250 - 1330726 + | hypothetical protein Synpcc7942_1303 1331150 - 1330752 - | hypothetical protein Synpcc7942_1304 1331732 - 1331160 - | hypothetical protein Synpcc7942_1305 1333444 - 1331834 - | ATPase TERM 744 1333500 - 1333481 - R 87 -13.6 -3.10091 | opp_overlap 1333484, overlap 1333476 1333484 AGTCTCAAAAGCAGA CAAGGGGC AATA GCCCCTTG CATTAAACCTCAGCT TERM 745 1333497 - 1333484 - R 73 -9.5 -3.68757 | opp_overlap 1333484, overlap 1333481 1333476 CTCAAAAGCAGACAA GGGGC AATA GCCCC TTGCATTAAACCTCA Synpcc7942_1306 1334082 - 1333522 - | hypothetical protein Synpcc7942_1307 1334181 - 1334996 + | putative ABC-2 type transport system permease protein Synpcc7942_1308 1335009 - 1336076 + | tryptophanyl-tRNA synthetase Synpcc7942_1309 1336073 - 1337005 + | hypothetical protein Synpcc7942_1310 1337076 - 1338047 + | ndhF3 operon transcriptional regulator Synpcc7942_1311 1338578 - 1338222 - | hypothetical protein Synpcc7942_1312 1340458 - 1338656 - | ATPase aspS 1340634 - 1342433 + | aspartyl-tRNA synthetase TERM 746 1342505 - 1342478 - T 85 -9.9 -4.15453 | gap 1 GAAGCGATCGCAAAA GCCCTCCT-CGC TATCT GCAAAGGAGGGC TTCAAAATTTCTGAC Synpcc7942_1314 1344405 - 1342534 - | FtsH-2 peptidase Synpcc7942_1315 1345983 - 1344583 - | tRNA (uracil-5-)-methyltransferase Gid Synpcc7942_1316 1347114 - 1346077 - | Mn transporter MntC Synpcc7942_1317 1347173 - 1347910 + | ATPase Synpcc7942_1318 1347917 - 1348768 + | manganese transport system membrane protein MntB Synpcc7942_1319 1348834 - 1349373 + | pyrimidine regulatory protein PyrR Synpcc7942_1320 1350296 - 1349340 - | hypothetical protein TERM 747 1350162 - 1350132 - G 72 -9.6 -3.62046 | opp_overlap 1350132 GTAGTTCTCCAATAA GCTGCGCAGCCGTC GCA GACTGACGCGCAAC TGGTGTAGATCCTCA Synpcc7942_1321 1351433 - 1350414 - | hypothetical protein Synpcc7942_1322 1351613 - 1351840 + | photosystem I reaction center subunit IV TERM 748 1351873 - 1351892 + F 100 -10 -5.28176 | opp_overlap 1351873 AAGAGGTTCCTGAAA CGGCTACA TCAC TGTGGCCG TTTTTTGTGGCTGAA Synpcc7942_1323 1351949 - 1352797 + | DNA-(apurinic or apyrimidinic site) lyase / formamidopyrimidine-DNA glycosylase Synpcc7942_1324 1355588 - 1352829 - | DEAD/DEAH box helicase-like TERM 749 1354066 - 1354099 + g 72 -5.9 -4.49981 | gap 1, opp_overlap 1354052, overlap 1354068 TCCGCCAGCTCTGCT TGGAGGCGATCGC-GC TCA GCAGCGATCGCGGCAA TTTTCTCCTGCTCTG Synpcc7942_1325 1355787 - 1357151 + | primary replicative DNA helicase Synpcc7942_1326 1357232 - 1360693 + | transcription-repair coupling factor Synpcc7942_1327 1360808 - 1361101 + | hypothetical protein TERM 750 1361289 - 1361307 + G 75 -8.8 -4.15565 | AACGCTCCGGCTTAG CGGTCTGC TCC GCAGACAG TTTTGGCGTAATGAA Synpcc7942_1328 1361167 - 1361559 + | hypothetical protein Synpcc7942_1329 1361879 - 1362505 + | hypothetical protein Synpcc7942_1330 1362508 - 1363164 + | hypothetical protein TERM 751 1363222 - 1363239 + F 76 -10.5 -3.29043 | opp_overlap 1363233 TAAAAGTCCGCGATC GCTGCGC CAAA GCGCGGC TTCTCGCCAGCCGTT Synpcc7942_1331 1363290 - 1363466 + | CAB/ELIP/HLIP superfamily protein Synpcc7942_1332 1363471 - 1364091 + | hypothetical protein Synpcc7942_1333 1364091 - 1364786 + | ExsB TERM 752 1365567 - 1365588 + G 70 -5.1 -4.38712 | gap 1, overlap 1365568 GGGGCGATTTTCAGT TGCTCTCGGT GTC GCCG-GAGCG TTTTCTGCGCCTCGA Synpcc7942_1334 1364783 - 1366180 + | aminodeoxychorismate synthase, subunit I Synpcc7942_1335 1366177 - 1366971 + | branched-chain amino acid aminotransferase Synpcc7942_1336 1367261 - 1368343 + | hypothetical protein Synpcc7942_1337 1368411 - 1372715 + | Integrins alpha chain TERM 753 1372815 - 1372772 - T 72 -5.2 -4.58283 | overlap 1372774 1372778 CAACCTGCTGAAAAA GAGTAACCGTTCAAGCCCGA TCGC TTGGGCTTGAACGGTTGAAA GCAGGATGGGTTGCA TERM 754 1372813 - 1372774 - T 93 -12.2 -3.90316 | overlap 1372772 1372778 ACCTGCTGAAAAAGA GTAACCGTTCAAGCCCGA TCGC TTGGGCTTGAACGGTTGA AAGCAGGATGGGTTG TERM 755 1372809 - 1372778 - T 100 -17.4 -3.60925 | overlap 1372774 1372772 GCTGAAAAAGAGTAA CCGTTCAAGCCCGA TCGC TTGGGCTTGAACGG TTGAAAGCAGGATGG Synpcc7942_1338 1373645 - 1372863 - | hypothetical protein Synpcc7942_1339 1373973 - 1373779 - | hypothetical protein def 1374639 - 1374061 - | peptide deformylase Synpcc7942_1341 1374756 - 1375841 + | hypothetical protein Synpcc7942_1342 1375911 - 1377002 + | GDP-mannose 4,6-dehydratase Synpcc7942_1343 1377217 - 1378335 + | NADH dehydrogenase subunit H TERM 756 1378335 - 1378347 + F 72 -4.7 -4.65747 | GGCCTTTGGGGGCTA GTCCG TCT CGGTC TTTTCTTGAGAGTTC Synpcc7942_1344 1378378 - 1378986 + | NADH dehydrogenase subunit I Synpcc7942_1345 1378990 - 1379595 + | NADH dehydrogenase subunit J Synpcc7942_1346 1379614 - 1379925 + | NADH dehydrogenase subunit K TERM 757 1379981 - 1380006 + T 100 -14.1 -4.7373 | gap 1, opp_overlap 1379980 1379979 ATCTTGCAAGCAATG GCTGCCTT-CGG TTT CCGCAAGGCAGC TTTTTAGTAGCGTCA Synpcc7942_1347 1381014 - 1380019 - | 2-hydroxyacid dehydrogenase-like Synpcc7942_1348 1381331 - 1381032 - | hypothetical protein Synpcc7942_1349 1382053 - 1381367 - | hypothetical protein Synpcc7942_1350 1382355 - 1382050 - | hypothetical protein Synpcc7942_1351 1383096 - 1382386 - | HAD family hydrolase TERM 758 1383312 - 1383328 + G 75 -5.7 -4.57341 | opp_overlap 1383309 CTCTGCCAGAAAGCG GCGGCCG ATC CGGTGGC TTTTTGGGGCGAATT Synpcc7942_1352 1383192 - 1385162 + | acetyl-CoA synthetase TERM 759 1385256 - 1385235 - f 95 -15.9 -2.78816 | TGATCTGCGATGACA GTCCGAGGC GATC GCCTCGGAC AAGGCTCAGTCCCAA Synpcc7942_1353 1385412 - 1386080 + | hypothetical protein Synpcc7942_1354 1386587 - 1388083 + | putative export protein Synpcc7942_1355 1390898 - 1388109 - | response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) TERM 760 1388763 - 1388751 - G 71 -4.8 -4.59342 | opp_overlap 1388751 GGCAGGAGAAATAAA TCCC ATTTG GGGA TGTTGCCAACGCAAC Synpcc7942_1356 1391350 - 1390895 - | response regulator receiver domain-containing protein Synpcc7942_1357 1396770 - 1391347 - | multi-sensor signal transduction histidine kinase TERM 761 1393706 - 1393725 + g 71 -4.2 -4.62302 | opp_overlap 1393708 1393709, overlap 1393708 1393709 TCTGCTTGGTCGCCA AATCCTCG CCAG CGAGGGTG TTTTTCAAGCTCTTC TERM 762 1396810 - 1396791 - R 71 -10.8 -2.91735 | opp_overlap 1396787 CTAACAGTTCACATA TCTAGCTC TGCT GAGCTAGA AGGTGCTTAGGGGGA TERM 763 1397109 - 1397083 - R 72 -4.5 -4.59773 | gap 2, opp_overlap 1397083 GCTGATCCTGAAAAA TGGC-TCAGC-GA TCG CCTGCTGATGCCA TAGATTCCAAGAAAA Synpcc7942_1358 1397878 - 1397087 - | hypothetical protein TERM 764 1398195 - 1398176 - R 82 -2.8 -5.24531 | gap 1, overlap 1398177 1398178 AGGTTCCATAAAAAA GC-GGCG GGTCAAG CGCCAGC AAGCGCTAAATAAAG Synpcc7942_1359 1399499 - 1398294 - | coenzyme F420 hydrogenase Synpcc7942_1360 1399742 - 1401052 + | cell envelope-related transcriptional attenuator Synpcc7942_1361 1401085 - 1401588 + | hypothetical protein Synpcc7942_1362 1401672 - 1402157 + | hypothetical protein Synpcc7942_1363 1402353 - 1402640 + | hypothetical protein TERM 765 1402742 - 1402725 - g 91 -6.9 -5.48303 | overlap 1402741 ACAACCCCAAAAAAA GCAGCCT TCTA AGGCAGC CCGCAAGCGAGCCGA Synpcc7942_1364 1402687 - 1403103 + | hypothetical protein TERM 766 1403226 - 1403247 + T 74 -6.5 -4.52873 | GCTGGTTTTACGACC CGTGGCCCT GAGC AGGGCGATG TTATTTTTCTGGCGG Synpcc7942_1365 1404060 - 1403362 - | multiple antibiotic resistance (MarC)-related proteins TERM 767 1403833 - 1403823 - G 70 -3.2 -4.78753 | overlap 1403826 GCAATAGCAACAAAA TACC TCC GGCA ATTCGGAATGATGAA Synpcc7942_1366 1405203 - 1404292 - | 1,4-dihydroxy-2-naphthoate octaprenyltransferase TERM 768 1404922 - 1404907 - G 70 -10.4 -3.22223 | CAACCCTAGGATCAA GCTGGC TTGG GCCAGC CAAAACAGCAGCCAA Synpcc7942_1367 1405262 - 1406629 + | cytochrome P450 Synpcc7942_1368 1406657 - 1406992 + | hypothetical protein recR 1407202 - 1407837 + | recombination protein RecR Synpcc7942_1370 1407963 - 1408202 + | hypothetical protein Synpcc7942_1371 1409368 - 1408205 - | magnesium and cobalt transport protein CorA TERM 769 1409006 - 1408993 - G 81 -3.1 -5.252 | CAGGTCGATAAAAAA TCACC TCTA GGTAA TGGGGATAGCGTTCC Synpcc7942_1372 1409560 - 1413132 + | methionine synthase (B12-dependent) TERM 770 1413250 - 1413233 - T 100 -11.3 -4.67353 | opp_overlap 1413233 1413230 CTAGGCATTGAAAAA GGGGAGA TTTC TCTCCCC TGACTTTAGGGATCC TERM 771 1413233 - 1413250 + T 73 -11.3 -2.64803 | opp_overlap 1413233, overlap 1413230 CTAGGCATTGAAAAA GGGGAGA TTTC TCTCCCC TGACTTTAGGGATCC Synpcc7942_1373 1413982 - 1413287 - | hydrogenase accessory protein TERM 772 1413583 - 1413547 - G 77 -8.1 -4.20531 | gap 2, overlap 1413548 CATAGCCATGGAAAA GCC-CCGCGATTGC-GG CTAGC CCTGCAATCGCGGCAAC TGGCAACGCTTTTTT Synpcc7942_1374 1415914 - 1414283 - | ribosomal large subunit pseudouridine synthase D TERM 773 1415681 - 1415667 - G 72 -5.7 -4.46212 | overlap 1415671 GCTTGCAGGACAAAA CGATC GCCCT GATCG TTGGCAGCGATCAGC Synpcc7942_1375 1416506 - 1415985 - | hypothetical protein Synpcc7942_1376 1417302 - 1416706 - | hypothetical protein Synpcc7942_1377 1417540 - 1419879 + | metal dependent phosphohydrolase Synpcc7942_1378 1421167 - 1419926 - | hypothetical protein TERM 774 1421197 - 1421221 + H 70 -6.3 -4.26189 | opp_overlap 1421197 1421189 1421190 CATCAAACCAAAAAA GCAGGCTAGCG TTT TGCTCTCCTGC TTTTCGGCTTTATGA TERM 775 1421221 - 1421197 - H 91 -5.6 -5.40004 | opp_overlap 1421197, overlap 1421189 1421190 CATCAAACCAAAAAA GCAGGCTAGC GTTTT GCTCTCCTGC TTTTCGGCTTTATGA TERM 776 1422299 - 1422329 + G 74 -12.6 -2.78216 | overlap 1422278 1422302 CGGTGCCGGCACCGT GGAGTTTCTGGTCG ATG CGACCGGCAACTTC TACTTCATGGAGATG TERM 777 1422302 - 1422326 + G 72 -10.7 -3.54029 | overlap 1422299 TGCCGGCACCGTGGA GTTTCTGGTCG ATG CGACCGGCAAC TTCTACTTCATGGAG Synpcc7942_1379 1421475 - 1422836 + | acetyl-CoA carboxylase biotin carboxylase subunit Synpcc7942_1380 1422879 - 1424603 + | sulfate permease Synpcc7942_1381 1424685 - 1426610 + | ATPase TERM 778 1426993 - 1426973 - f 72 -4.7 -4.70046 | GACAAAATCATAAAA TTCCAATGA GCC CCATGGGAA AAATTGGTCGTTTGC TERM 779 1428434 - 1428421 - g 87 -9.5 -4.53034 | CCGAGATAACGAAAA GGCGC TAGA GCGCC AGGCTTGCTACGACT TERM 780 1428659 - 1428685 + G 89 -13.1 -4.03093 | gap 1, opp_overlap 1428652, overlap 1428676 GTACGACAGAGTGAT CTCATCGCTCGC TTGA GCG-GCGATGAG TTTGTCGTCATTCTC TERM 781 1428873 - 1428863 - g 71 -6.8 -4.2461 | ATCTTGATCAAGAAA GCTG ACA CAGC AATGTACAGCATCAA Synpcc7942_1382 1427042 - 1429711 + | diguanylate cyclase/phosphodiesterase Synpcc7942_1383 1430310 - 1429798 - | inorganic diphosphatase TERM 782 1430336 - 1430355 + H 70 -4.9 -4.53636 | overlap 1430337 CAGAATCGTCTCTAG GGGCAGG AACAGA CCTGCCG TTTTGATTGTCTCAT TERM 783 1430654 - 1430639 - g 73 -9 -3.96148 | GCTCCTGAGCAGAAA GCAAGC CTCC GCTTGC AATCAGGCCAAACGA TERM 784 1430777 - 1430756 - g 80 -11.6 -3.83502 | opp_overlap 1430755 1430754 1430752 CAGTTGCAGATTAAA CCCGTAGG CTCAAC CCTACGGG CCTGTCTTTCGACAG Synpcc7942_1384 1430438 - 1431283 + | hypothetical protein Synpcc7942_1385 1431506 - 1431285 - | hypothetical protein Synpcc7942_1386 1432760 - 1431627 - | hypothetical protein TERM 785 1432496 - 1432476 - G 72 -2.4 -5.00884 | opp_overlap 1432476 1432477, overlap 1432477 ATCCGGGCCAAAAAA CTCCGCTC GCCCT GTGCGGAC TTGGTCAATCAGATG Synpcc7942_1387 1432853 - 1433680 + | hypothetical protein TERM 786 1434054 - 1434094 + G 72 -3.9 -4.82901 | overlap 1434057 1434060 1434061 1434063 1434071 AGCAGAAATTCATTT CGTCCATCGCAGCGATC GCGATCA GCTCGCTGTGGTTGGTG TTTTTCTGGCAGCGG Synpcc7942_1388 1433659 - 1434372 + | carbonate dehydratase TERM 787 1434498 - 1434463 - T 100 -17 -4.84527 | opp_overlap 1434456 1434469, overlap 1434465 CTTAGACATCAAAAA GGGAAAGGGTCTGAGA TTAC TCCCAGACCCTTTCAC CTACTCAATTTTGAT TERM 788 1434496 - 1434465 - T 100 -18.2 -2.69273 | opp_overlap 1434456 1434469, overlap 1434463 TAGACATCAAAAAGG GAAAGGGTCTGAGA TTAC TCCCAGACCCTTTC ACCTACTCAATTTTG TERM 789 1434469 - 1434492 + T 81 -11 -3.62275 | opp_overlap 1434465 1434463, overlap 1434456 CATCAAAAAGGGAAA GGGTCTGAGA TTAC TCCCAGACCC TTTCACCTACTCAAT Synpcc7942_1389 1435620 - 1434538 - | photosystem q(b) protein Synpcc7942_1390 1436066 - 1435722 - | protein kinase C inhibitor Synpcc7942_1391 1436154 - 1437692 + | Mg chelatase-related protein TERM 790 1437869 - 1437839 - T 80 -5.4 -4.93365 | opp_overlap 1437839 TCTGATAAGGAAAAA GGGGTGGATGCC GTATTGA AACATCAACCCC TTTGGCAAAAAATAC Synpcc7942_1392 1441983 - 1437916 - | alkaline phosphatase TERM 791 1441450 - 1441480 + g 86 -11.2 -4.14392 | opp_overlap 1441440 1441452, overlap 1441445 1441452 AGAAATGCTGCGCAG AATCGGCGTTGTTG CGC CAACAACGCCAATC TTTTCCCCATTGACA TERM 792 1441478 - 1441452 - G 87 -16 -3.2964 | opp_overlap 1441445 1441452 1441450, overlap 1441440 AAATGCTGCGCAGAA TCGGCGTTGTTG CGC CAACAACGCCAA TCTTTTCCCCATTGA TERM 793 1441452 - 1441478 + g 84 -13.8 -3.67 | opp_overlap 1441440 1441452, overlap 1441445 1441450 AAATGCTGCGCAGAA TCGGCGTTGTTG CGC CAACAACGCCAA TCTTTTCCCCATTGA Synpcc7942_1393 1442504 - 1443418 + | histone deacetylase/AcuC/AphA family protein-like Synpcc7942_1394 1443546 - 1445309 + | PDZ/DHR/GLGF Synpcc7942_1395 1445306 - 1445725 + | hypothetical protein Synpcc7942_1396 1446000 - 1445743 - | hypothetical protein Synpcc7942_1397 1446191 - 1447519 + | hypothetical protein TERM 794 1447582 - 1447551 - T 95 -9.4 -5.09895 | opp_overlap 1447554 1447555, overlap 1447553 1447554 GAGTTAGCGAAAAAA TAGCGCCCTGGTAG AGCT CTACCAGGGCATTG CTGCCTCTAGGGGGT TERM 795 1447580 - 1447553 - T 93 -12 -4.17608 | opp_overlap 1447554 1447555, overlap 1447551 1447554 GTTAGCGAAAAAATA GCGCCCTGGTAG AGCT CTACCAGGGCAT TGCTGCCTCTAGGGG TERM 796 1447579 - 1447554 - T 95 -15.5 -3.09842 | opp_overlap 1447554 1447555, overlap 1447553 1447551 TTAGCGAAAAAATAG CGCCCTGGTAG AGCT CTACCAGGGCA TTGCTGCCTCTAGGG TERM 797 1447554 - 1447579 + T 85 -13.3 -3.20382 | opp_overlap 1447554 1447553 1447551, overlap 1447555 TTAGCGAAAAAATAG CGCCCTGGTAG AGCT CTACCAGGGCA TTGCTGCCTCTAGGG TERM 798 1447555 - 1447578 + T 95 -16.8 -2.52015 | opp_overlap 1447554 1447553 1447551, overlap 1447554 TAGCGAAAAAATAGC GCCCTGGTAG AGCT CTACCAGGGC ATTGCTGCCTCTAGG TERM 799 1447586 - 1447596 + T 79 -4.6 -4.90296 | ACCAGGGCATTGCTG CCTC TAG GGGG TTTTTATAAAGTTTT Synpcc7942_1398 1450069 - 1447847 - | cellulose synthase (UDP-forming) TERM 800 1449980 - 1449970 - G 79 -6.8 -4.78661 | AGGCAAAAACTAAAA CAGC GAT GCTG ATAGCTAAAAATAGC Synpcc7942_1399 1451241 - 1450087 - | hypothetical protein Synpcc7942_1400 1452376 - 1451255 - | endo-1,4-beta-xylanase TERM 801 1452664 - 1452642 - R 86 -12.1 -3.43071 | GTCTAGATTAACTAA GCCTCTCTT GGAAT AAGAGAGGC TAACTCATGACAACT Synpcc7942_1401 1453104 - 1452727 - | hypothetical protein Synpcc7942_1402 1453317 - 1454576 + | hypothetical protein Synpcc7942_1403 1455369 - 1454593 - | hydroxyacylglutathione hydrolase Synpcc7942_1404 1456084 - 1455395 - | two component transcriptional regulator TERM 802 1456475 - 1456497 + G 74 -4.8 -4.78149 | overlap 1456478 GATGTTTCGACCACG TCTTGCCG ACAACCG CGGCATGA TTTTTCCGTTCTCCC Synpcc7942_1405 1456260 - 1456787 + | hypothetical protein Synpcc7942_1406 1457909 - 1456803 - | ATPase TERM 803 1458472 - 1458483 + G 72 -3.6 -4.8048 | overlap 1458463 TTCGCTCGTTGCCAG GGGC GATC GCTC TTTTTAGTCTGACCC TERM 804 1458902 - 1458925 + G 74 -10.2 -3.54653 | overlap 1458876 CCAATTACGGGGTTG GCGGGCGCTG ATTG CAGCGATCGC TTGTCTCCTGCCAGT TERM 805 1458958 - 1458969 + G 75 -5.8 -4.64676 | overlap 1458956 TGCTTGGTCTCGTGC TGCC CGTC GGCA TTTTGTTAGAACTCG Synpcc7942_1407 1458057 - 1459688 + | iron(III) ABC transporter permease protein Synpcc7942_1408 1459914 - 1460555 + | membrane-associated protein Synpcc7942_1409 1460847 - 1461869 + | iron transport system substrate-binding protein TERM 806 1461926 - 1461891 - T 93 -8.3 -4.74504 | opp_overlap 1461893 1461896, overlap 1461894 1461896 AGCGCAATCTAAAAA CAATAGCCACCCGAT TCAAGG ATCGGGTGGCTGCTC TGTTGAGAGAATGGA TERM 807 1461893 - 1461924 + T 75 -11.6 -3.07013 | opp_overlap 1461891 1461894 1461896, overlap 1461896 CGCAATCTAAAAACA ATAGCCACCCGATT CAAG GATCGGGTGGCTGC TCTGTTGAGAGAATG TERM 808 1461923 - 1461894 - T 100 -12.2 -4.47888 | opp_overlap 1461893 1461896, overlap 1461891 1461896 GCAATCTAAAAACAA TAGCCACCCGAT TCAAGG ATCGGGTGGCTG CTCTGTTGAGAGAAT TERM 809 1461921 - 1461896 - T 100 -14.8 -3.83257 | opp_overlap 1461893 1461896, overlap 1461894 1461891 AATCTAAAAACAATA GCCACCCGAT TCAAGG ATCGGGTGGC TGCTCTGTTGAGAGA TERM 810 1461896 - 1461921 + T 95 -15.5 -2.7535 | opp_overlap 1461896 1461894 1461891, overlap 1461893 AATCTAAAAACAATA GCCACCCGATT CAAG GATCGGGTGGC TGCTCTGTTGAGAGA Synpcc7942_1410 1463571 - 1461949 - | 2-isopropylmalate synthase Synpcc7942_1411 1464358 - 1463651 - | hypothetical protein Synpcc7942_1412 1464817 - 1464368 - | hypothetical protein Synpcc7942_1413 1464941 - 1465696 + | hypothetical protein Synpcc7942_1414 1466434 - 1465709 - | ATPase TERM 811 1466484 - 1466462 - R 100 -14.2 -4.85782 | opp_overlap 1466464 1466466 GGTTGCAAAAAGAAA GACAGCGCCA TGC TAGCGCTGTC TTGGGAAAGGATGGG Synpcc7942_1415 1468095 - 1466530 - | NAD(P)H-quinone oxidoreductase subunit 2 TERM 812 1467481 - 1467495 + g 73 -5.6 -4.58395 | opp_overlap 1467465 CAGCAGTGCCAGCGG CTGAGC TTC GCCCAG TTTTTCCGCGATCGC TERM 813 1468281 - 1468298 + H 100 -5.5 -5.53288 | overlap 1468282 TTGGGTTGGGCCCTC TCGATCG CCTG CGATCGC TTTTTTTGACTTCCC TERM 814 1468282 - 1468297 + H 78 -9 -3.90888 | overlap 1468281 TGGGTTGGGCCCTCT CGATCG CCTG CGATCG CTTTTTTTGACTTCC TERM 815 1470315 - 1470304 - g 79 -3.6 -5.0133 | overlap 1470291 TACTGCGGCAAAAAA CCGA AGGG CCGG ACCAACTGGGAACAC TERM 816 1470979 - 1470967 - g 70 -3.3 -4.76123 | overlap 1470968 1470970 AAACGACTAAGAAAA CCACG ACT CGTCG GACTACGAGCCGCTA Synpcc7942_1416 1468344 - 1470995 + | DNA topoisomerase I Synpcc7942_1417 1471000 - 1471983 + | hypothetical protein Synpcc7942_1418 1472186 - 1471980 - | hypothetical protein TERM 817 1472247 - 1472229 - H 76 -9.6 -3.73953 | ACTATTTTTATCAAA TCACTGCT TTG AGCAGCGA TCGCTACGAATTCAG chlL 1472585 - 1473445 + | protochlorophyllide reductase iron-sulfur ATP-binding protein TERM 818 1473547 - 1473570 + G 72 -2.4 -4.87786 | AGCACTCTCTTTTGA GTGTGAAACT GGCA ACTATCACAC TTTTTGTCCCATTAG TERM 819 1474249 - 1474261 + G 70 -3.3 -4.82901 | AGGGAGTTACGCGAT CGGCT TGA ATCCG TTTTTGTCCAGAACA Synpcc7942_1420 1473509 - 1474909 + | light-independent protochlorophyllide reductase subunit N Synpcc7942_1421 1475239 - 1475547 + | putative carboxysome assembly protein TERM 820 1475554 - 1475579 + F 86 -10.5 -3.97209 | CGCATGTAAGGTTGA GGGCTGTTGAG TCGT TTCAATAGCCC TTTCATCTTGATTGC Synpcc7942_1422 1475694 - 1475993 + | carbon dioxide concentrating mechanism protein CcmL Synpcc7942_1423 1476059 - 1477678 + | carbonate dehydratase Synpcc7942_1424 1477713 - 1478198 + | carbon dioxide concentrating mechanism protein TERM 821 1478202 - 1478232 + F 93 -11.8 -4.29106 | opp_overlap 1478201 1478212 CCCGATCGCTAAGAT GTGCACAGCAGCTC TAG GAGCTGCAGGGTAC TTTGTTGATGTCGGC TERM 822 1478953 - 1478915 - g 71 -4.5 -4.56597 | overlap 1478918 CGGGTTCGCGAAAAA CAACCGCTGTTGGAGCT ACCGG AACTCGAACGGCAGCCG ATCGCGATCGAAGCA Synpcc7942_1425 1478240 - 1479070 + | carbon dioxide concentrating mechanism protein CcmO rbcL 1479461 - 1480879 + | ribulose bisophosphate carboxylase TERM 823 1480896 - 1480937 + F 70 -10.9 -2.79671 | gap 1, overlap 1480895 1480909 GAGCCTCTGACTATC GCTGGGGGAGTGAGCGTTGC TGC GTAAAGCTTTCTCCCC-AGC CTTTCGACTTAACCT Synpcc7942_1427 1480970 - 1481305 + | ribulose 1,5-bisphosphate carboxylase small subunit TERM 824 1481328 - 1481349 + F 100 -13.7 -5.4251 | TTTGTCTTGATAGCT GCTCCTGCC TTTG GGCAGGGGC TTTTTTCTGTCTGCC TERM 825 1481358 - 1481383 + F 82 -11.9 -3.55481 | overlap 1481356 CAGGGGCTTTTTTCT GTCTGCCATTC TTGA GGATGGCGGAC TCTTTCCCTTTTGCT Synpcc7942_1428 1481407 - 1482594 + | phosphoribosylaminoimidazole carboxylase ATPase subunit Synpcc7942_1429 1483267 - 1482857 - | hypothetical protein Synpcc7942_1430 1484251 - 1483316 - | hypothetical protein TERM 826 1483435 - 1483407 - G 91 -13.2 -4.08064 | opp_overlap 1483400 AACGCTCGTCCAAAA GCCCCATAGATG TAGTC CATCTCTGGGGC GCTGGGGTCTCGTGG TERM 827 1484925 - 1484951 + G 72 -10.9 -3.51924 | opp_overlap 1484924 1484921 AGAGCCTGAAAGTAG TGCGATCGCTG CGCAA TGGCGATCGCA TTCTCTCCGTCAAAA Synpcc7942_1431 1484549 - 1484986 + | peptidylprolyl isomerase Synpcc7942_1432 1486710 - 1485025 - | bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein TERM 828 1486102 - 1486122 + g 72 -9.7 -3.54741 | opp_overlap 1486106 1486114 CAGCCGATAGCTGAT CAGATCAGC AAT GCTGATCAG TTTCAGCCGATGCTG TERM 829 1487189 - 1487172 - g 71 -11.3 -3.10012 | opp_overlap 1487172 1487171 AACCTGACGATCGAA GCGATCG ACGT CGATCGC ATTGCTGAGCGTTGT argC 1486983 - 1488041 + | N-acetyl-gamma-glutamyl-phosphate reductase TERM 830 1488214 - 1488185 - T 86 -6.3 -5.14965 | AGCCGCATTAAAAAA TCCCTGCTCGTCC AGTT GGATTTGCAGGGA TTCCCAGTGAGGAGG Synpcc7942_1434 1488854 - 1488255 - | hypothetical protein Synpcc7942_1435 1490723 - 1488975 - | 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase TERM 831 1489024 - 1489014 - G 71 -8.2 -3.9122 | opp_overlap 1489018 1489019 TAGCTCGGCAAATAA GGCG CGT CGCC AAGCGGCATTTTGTC Synpcc7942_1436 1491205 - 1490759 - | hypothetical protein TERM 832 1491099 - 1491112 + g 75 -9.5 -3.71527 | overlap 1491089 AGCACCGGCAGCGAT CGCCG TTTA CGGCG TTTCAGTCGTTGCCA Synpcc7942_1437 1491286 - 1491564 + | hypothetical protein Synpcc7942_1438 1492290 - 1491796 - | putative anti-sigma regulatory factor TERM 833 1492371 - 1492398 + r 78 -12.8 -2.93073 | opp_overlap 1492371 1492374, overlap 1492368 1492374 CGAGTAGAGATAGAA CAAGGGCTGAAG TTGC CTTCAACCCTTG TCATTGTTAGAGCGA TERM 834 1492398 - 1492371 - R 100 -15 -3.65656 | opp_overlap 1492371 1492368 1492374, overlap 1492374 CGAGTAGAGATAGAA CAAGGGCTGAAG TTGC CTTCAACCCTTG TCATTGTTAGAGCGA TERM 835 1492395 - 1492374 - R 86 -10.9 -3.95183 | opp_overlap 1492374 1492371 1492368, overlap 1492371 GTAGAGATAGAACAA GGGCTGAAG TTGC CTTCAACCC TTGTCATTGTTAGAG Synpcc7942_1439 1494030 - 1492429 - | NAD(P)H-quinone oxidoreductase subunit 4 TERM 836 1494121 - 1494134 + r 79 -2.3 -5.1925 | opp_overlap 1494120, overlap 1494122 GTAAAAATACTCAAG TTGGC GATC GCCAC TTTTTTACATTGTAA TERM 837 1494138 - 1494150 + r 75 -4.9 -4.83169 | GGCGATCGCCACTTT TTTAC ATT GTAAA TTTTTGTGACGCAAT Synpcc7942_1440 1495093 - 1494173 - | homoserine kinase TERM 838 1494907 - 1494893 - G 76 -3.5 -5.00616 | gap 1, overlap 1494894 1494895 1494904 CTGCTTTTCAAAAAA CGCCGC GAAA GCG-CG ATAAACCAGATTGTC cobD 1496151 - 1495174 - | cobalamin biosynthesis protein Synpcc7942_1442 1496399 - 1496833 + | hypothetical protein TERM 839 1496904 - 1496886 - f 90 -4.5 -5.37593 | overlap 1496888 TGCTAAATTAAAAAA CGTGCCT CAATC AGGCATG GGTCGCTAGCTCAGC Synpcc7942_1443 1497217 - 1498290 + | fructose-1,6-bisphosphate aldolase TERM 840 1498336 - 1498363 + G 100 -14.2 -4.78107 | CCTCTCTGGAGTGCT GCGGAATCTCGA CTTG TCGGGGTTCCGC TTTTTAGTGCTGGTC TERM 841 1498532 - 1498511 - g 100 -6.6 -5.95166 | gap 1 CTTAATCAAAAAAAA GCTG-CCTC GTCAG GAGGTCAGC TTACAGTTCTTGACT Synpcc7942_1444 1498331 - 1498624 + | hypothetical protein Synpcc7942_1445 1499817 - 1498702 - | hypothetical protein Synpcc7942_1446 1500342 - 1499923 - | hypothetical protein Synpcc7942_1447 1500489 - 1501307 + | carbonate dehydratase TERM 842 1501936 - 1501916 - g 71 -8.9 -3.79113 | ACCTTTTCAGAACAA CGCCTGCTG GAA CTGCAAGCG CGGCATCCCGACGCC Synpcc7942_1448 1501343 - 1502305 + | quinolinate synthetase lpxD 1503392 - 1502325 - | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase Synpcc7942_1450 1503457 - 1504257 + | ATPase TERM 843 1504532 - 1504520 - g 70 -3.3 -4.71828 | overlap 1504521 ACCCCAGCAACAAAA CCGTC TAC GACGT CGATATCTACGGTCG Synpcc7942_1451 1504300 - 1504761 + | hypothetical protein Synpcc7942_1452 1506194 - 1504758 - | DNA repair protein RadA TERM 844 1506436 - 1506421 - g 81 -3.2 -5.27477 | opp_overlap 1506410 ATCGCAAGGAAAAAA TCCTCG TTGT CGACGA TGAAGCGAGCATCCG Synpcc7942_1453 1506399 - 1507133 + | two component transcriptional regulator Synpcc7942_1454 1507284 - 1508324 + | putative glycerol-3-phosphate acyltransferase PlsX Synpcc7942_1455 1508394 - 1509401 + | 3-oxoacyl-(acyl carrier protein) synthase III Synpcc7942_1456 1509455 - 1510336 + | malonyl CoA-acyl carrier protein transacylase TERM 845 1510538 - 1510552 + GT 76 -9.2 -3.72576 | TGTCTCCAACTGTGT GCGGCG ACC CGTCGC TTTCATGGCAAAAGA Synpcc7942_1457 1510305 - 1510982 + | 1-acyl-sn-glycerol-3-phosphate acyltransferase Synpcc7942_1458 1511528 - 1510962 - | hypothetical protein TERM 846 1511449 - 1511433 - G 100 -12.3 -4.68908 | GCCACCCAAAACAAA GATCGCC TGG GGCGATC GCTGGGCGACAGCAA Synpcc7942_1459 1512212 - 1511592 - | hypothetical protein Synpcc7942_1460 1512578 - 1512321 - | hypothetical protein Synpcc7942_1461 1513965 - 1512709 - | thiol oxidoreductase-like TERM 847 1513449 - 1513427 - G 70 -11.2 -2.90194 | ACGGCTTCAAGGAGA CCCCGGCCAA ATA CTGGCGGGGG CAACCGAAGCGAGAC Synpcc7942_1462 1515141 - 1514071 - | imelysin TERM 848 1516356 - 1516346 - g 70 -5.4 -4.4773 | overlap 1516348 CTACATCAACCAAAA TGGT CCG ACCA CAGGTGGTAACCTCG Synpcc7942_1463 1515369 - 1517000 + | porin TERM 849 1517028 - 1517064 + F 91 -11.6 -4.07687 | overlap 1517030 AGTTAGTTAATCCTT GGGAGAGGGTGGGGTC CGCAA GATCTCACCCTCTCTG TTTTGAGGGAAAGCT TERM 850 1517030 - 1517062 + F 100 -16.4 -3.63744 | overlap 1517028 TTAGTTAATCCTTGG GAGAGGGTGGGGTC CGCAA GATCTCACCCTCTC TGTTTTGAGGGAAAG Synpcc7942_1464 1517237 - 1518832 + | porin TERM 851 1518882 - 1518840 - f 76 -10.7 -3.39895 | gap 1, opp_overlap 1518842 1518843 1518844, overlap 1518841 GTTTCTAGGAATCAA CTGTTTAGTTAGGGATGGGC GATC GCCCATCCCTAACCAA-CTC TTTCCTCACCACATT TERM 852 1518881 - 1518841 - f 84 -14.2 -2.63723 | gap 1, opp_overlap 1518842 1518843 1518844, overlap 1518840 TTTCTAGGAATCAAC TGTTTAGTTAGGGATGGGC GATC GCCCATCCCTAACCAA-CT CTTTCCTCACCACAT TERM 853 1518842 - 1518882 + F 88 -12 -3.73072 | gap 1, opp_overlap 1518841 1518840, overlap 1518843 1518844 TTCTAGGAATCAACT G-TTTAGTTAGGGATGGGC GATC GCCCATCCCTAACCAACTC TTTCCTCACCACATT TERM 854 1518843 - 1518880 + F 100 -15.7 -3.44848 | opp_overlap 1518841 1518840, overlap 1518842 1518844 TCTAGGAATCAACTG TTTAGTTAGGGATGGGC GATC GCCCATCCCTAACCAAC TCTTTCCTCACCACA TERM 855 1518844 - 1518879 + F 100 -19.2 -2.66695 | opp_overlap 1518841 1518840, overlap 1518843 1518842 CTAGGAATCAACTGT TTAGTTAGGGATGGGC GATC GCCCATCCCTAACCAA CTCTTTCCTCACCAC TERM 856 1518899 - 1518917 + F 100 -10.3 -5.47914 | opp_overlap 1518899 1518896 TTCCTCACCACATTA GCTCTCG CCTGT CGAGAGC TTTTTTATGCTTTTT Synpcc7942_1465 1518994 - 1519449 + | BadM/Rrf2 family transcriptional regulator Synpcc7942_1466 1519664 - 1520668 + | cysteine synthase Synpcc7942_1467 1520674 - 1521363 + | heat shock protein DnaJ-like Synpcc7942_1468 1522141 - 1521482 - | putative monovalent cation/H+ antiporter subunit B TERM 857 1522016 - 1522003 - G 70 -5.2 -4.41633 | opp_overlap 1522003, overlap 1522000 GATTGCGAAAAATAA CGCC TGAGAC GGCG TTGATCACCCCAGTA Synpcc7942_1469 1522719 - 1522138 - | hypothetical protein TERM 858 1522516 - 1522502 - G 70 -10 -3.54177 | CGTAAAACCAACGAA GATCGC ACT GCGATC GCATAAAGCATGACT Synpcc7942_1470 1523005 - 1522712 - | hypothetical protein Synpcc7942_1471 1523259 - 1523002 - | hypothetical protein Synpcc7942_1472 1523642 - 1523256 - | hypothetical protein Synpcc7942_1473 1525081 - 1523639 - | putative monovalent cation/H+ antiporter subunit D Synpcc7942_1474 1525413 - 1525078 - | putative monovalent cation/H+ antiporter subunit C TERM 859 1525784 - 1525822 + r 75 -11.7 -3.04322 | opp_overlap 1525784 1525789, overlap 1525789 TCAACCCTGGTAATA GCTAAGGTCTGCCGCGC CCAGA GCACAGCAGACCTTACC TGTTGAGCGATTAGC TERM 860 1525822 - 1525784 - R 100 -16.8 -3.03159 | opp_overlap 1525784 1525789, overlap 1525789 TCAACCCTGGTAATA GCTAAGGTCTGCCGCGCC CAG AGCACAGCAGACCTTACC TGTTGAGCGATTAGC TERM 861 1525789 - 1525817 + r 70 -10.2 -3.1855 | opp_overlap 1525784 1525789, overlap 1525784 CCTGGTAATAGCTAA GGTCTGCCGCGC CCAGA GCACAGCAGACC TTACCTGTTGAGCGA TERM 862 1525817 - 1525789 - R 100 -15.3 -3.1855 | opp_overlap 1525789 1525784, overlap 1525784 CCTGGTAATAGCTAA GGTCTGCCGCGCC CAG AGCACAGCAGACC TTACCTGTTGAGCGA Synpcc7942_1475 1526954 - 1525833 - | sodium-dependent bicarbonate transporter TERM 863 1527952 - 1527962 + G 70 -3.2 -4.7078 | AGATTGCTGATGAAG TTGC CGA GCAG TTTTTCGATAATTAC Synpcc7942_1476 1527717 - 1528031 + | hypothetical protein Synpcc7942_1477 1530337 - 1528142 - | hypothetical protein TERM 864 1528311 - 1528299 - G 74 -4.7 -4.83169 | overlap 1528278 1528303 AGCTGTTCATAAAAA CCACC ATC GGGGG CTTCAGGCCAATAGC Synpcc7942_1478 1530852 - 1530415 - | cytochrome CytM petG 1530970 - 1531083 + | cytochrome b6-f complex subunit PetG TERM 865 1531110 - 1531147 + T 85 -6.9 -4.84017 | opp_overlap 1531115, overlap 1531115 TGTTGCTCTCAATCA CTCAACCGCAGTCAGCC GATT GGTTTGCTGCGGTTCTG TTTTTCTAGACCATT TERM 866 1531115 - 1531142 + T 83 -9.8 -4.13816 | opp_overlap 1531115, overlap 1531110 CTCTCAATCACTCAA CCGCAGTCAGCC GATT GGTTTGCTGCGG TTCTGTTTTTCTAGA Synpcc7942_1480 1531748 - 1531194 - | hypothetical protein hisH 1532398 - 1531745 - | imidazole glycerol phosphate synthase subunit HisH TERM 867 1532578 - 1532592 + H 81 -7.1 -4.72486 | ACCGCCGCCTCCGAC CTGCG TAGTC CGCAG TTTTTCGCCTTTATG Synpcc7942_1482 1532605 - 1534170 + | hypothetical protein Synpcc7942_1483 1534877 - 1534449 - | hypothetical protein murE 1536367 - 1534874 - | UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase Synpcc7942_1485 1536673 - 1536407 - | hypothetical protein Synpcc7942_1486 1536912 - 1536664 - | hypothetical protein rpsD 1536986 - 1537594 + | 30S ribosomal protein S4 TERM 868 1537620 - 1537651 + F 100 -15.2 -3.90744 | opp_overlap 1537617, overlap 1537623 CTGCTTACAAGACTG CAACAGCTCCTGCC TCTG GGTGGGGGCTGTTG TTGTTTGGCGCAAGG TERM 869 1537623 - 1537648 + F 88 -11.1 -4.08557 | opp_overlap 1537617, overlap 1537620 CTTACAAGACTGCAA CAGCTCCTGCC TCTG GGTGGGGGCTG TTGTTGTTTGGCGCA Synpcc7942_1488 1538545 - 1539897 + | membrane protein Synpcc7942_1489 1539953 - 1540789 + | nitrate transport permease TERM 870 1540879 - 1540854 - g 83 -7.6 -4.80396 | opp_overlap 1540853 GAAAACATTGAAAAA TCATTCCCTC TGAGTG GTGGGAATGA ATACCTTGCCCTTAA TERM 871 1541738 - 1541718 - g 75 -2.5 -5.06414 | GTGGCCCAAGAAAAA GCCTTCTTT GCC AAACACGGC CTCGATGAAGTCAGC Synpcc7942_1490 1540818 - 1542809 + | nitrate transport ATP-binding subunits C and D Synpcc7942_1491 1542834 - 1543670 + | nitrate transport ATP-binding subunits C and D TERM 872 1543705 - 1543729 + F 93 -8.6 -5.14563 | gap 1, opp_overlap 1543704 CTTAGCCTCAGAGAT TCCCTCTGCTC CCAT GGGC-GAGGGA TTTTTTACTGGGAGA Synpcc7942_1492 1543923 - 1544507 + | hypothetical protein mazG 1544514 - 1545353 + | nucleoside triphosphate pyrophosphohydrolase Synpcc7942_1494 1546095 - 1545382 - | hypothetical protein Synpcc7942_1495 1546650 - 1546123 - | hypothetical protein Synpcc7942_1496 1547552 - 1546647 - | acetylglutamate kinase Synpcc7942_1497 1548105 - 1547545 - | hypothetical protein TERM 873 1548289 - 1548241 - g 71 -8.7 -3.72576 | overlap 1548242 CGCTCTCTGACCAAA TCCGCCAGCGCCTCACGCTGCTG CGC CAGCAACGCCAAGTGCTGGTGAC GCTCCAAGGCCAAAA TERM 874 1548288 - 1548242 - g 71 -12.2 -2.83403 | overlap 1548241 GCTCTCTGACCAAAT CCGCCAGCGCCTCACGCTGCTG CGC CAGCAACGCCAAGTGCTGGTGA CGCTCCAAGGCCAAA Synpcc7942_1498 1548207 - 1548410 + | hypothetical protein TERM 875 1548587 - 1548565 - T 100 -12 -5.252 | opp_overlap 1548564 TACGGCGATAAAAAA GCGACTCCCA ATT TGGAAGCCGC AATTTGATTTGAATT Synpcc7942_1499 1548930 - 1548631 - | ferredoxin (2Fe-2S) prmA 1550078 - 1549179 - | ribosomal protein L11 methyltransferase Synpcc7942_1501 1551718 - 1550078 - | D-3-phosphoglycerate dehydrogenase Synpcc7942_1502 1551742 - 1552302 + | hypothetical protein Synpcc7942_1503 1552303 - 1553082 + | RNA-binding S4 TERM 876 1553260 - 1553276 + F 77 -6.6 -4.5442 | overlap 1553244 CCTAGGCTTGATGGC TTGGGA TTTAT TCCCAA TTTTATGATTCCAGA TERM 877 1554007 - 1553991 - g 77 -2.9 -5.01732 | overlap 1553979 AACGCGCCCAAAAAA GAATTGC TGA GCACCTC TTCCCTAAAATTGTA Synpcc7942_1504 1553330 - 1554718 + | hypothetical protein Synpcc7942_1505 1555936 - 1554839 - | 3-isopropylmalate dehydrogenase TERM 878 1555671 - 1555657 - G 71 -7 -4.2349 | overlap 1555659 CTCGCAGACCTAAAA GACCGG TTT CCGGAC GCTGCGATCGCGGCA Synpcc7942_1506 1556513 - 1556097 - | hypothetical protein TERM 879 1556984 - 1557022 + r 74 -11 -3.25942 | opp_overlap 1556984, overlap 1556988 1556997 AGGTCAGGCGTAGAA GGGTGTCTGACGGCACTG CGA TAGTGTTGTCAGACTCGC TTGGTCTGCCCCCAT TERM 880 1556988 - 1557018 + r 81 -13.4 -2.58714 | opp_overlap 1556984, overlap 1556984 1556997 CAGGCGTAGAAGGGT GTCTGACGGCACTG CGA TAGTGTTGTCAGAC TCGCTTGGTCTGCCC Synpcc7942_1507 1558331 - 1557396 - | lipoyl synthase TERM 881 1558135 - 1558122 - G 72 -3.7 -4.77036 | TCCCATCAGTAAAAA GGTGG CTGT CCCCC GGGCATAGCATTCGC Synpcc7942_1508 1559209 - 1558484 - | hypothetical protein TERM 882 1559529 - 1559551 + G 85 -14.2 -3.41978 | CGTTGTTGATAGCCG CGATCGCTTC CAG GAGGCGATCG TTGATTACGTTGTCC trmU 1559329 - 1560402 + | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase Synpcc7942_1510 1561178 - 1560399 - | RNA polymerase sigma factor SigF TERM 883 1560434 - 1560447 + g 72 -3.7 -4.74103 | GCAGAATCGATTTGA GGTGC TTGA GCCCC TTTTTGACTTGGCGC TERM 884 1560555 - 1560528 - G 78 -4.2 -4.9792 | gap 1, opp_overlap 1560534, overlap 1560534 CAGGTCATAGAAAAA GACAAACTCGAGA ATT TCACGAGTTC-TC TGCTCGAGCAGCTGC TERM 885 1560550 - 1560534 - G 76 -6.5 -4.62163 | opp_overlap 1560534, overlap 1560528 ATAGAAAAAGACAAA CTCGAGA ATT TCACGAG TTCTCTGCTCGAGCA Synpcc7942_1511 1561904 - 1561467 - | hypothetical protein Synpcc7942_1512 1563389 - 1561944 - | zeta-carotene desaturase TERM 886 1564236 - 1564216 - g 79 -9 -4.2461 | ACCTTGATGAATAAA GGCCTCGA GGTGA TCGAAGCC CACTATCTCTTCGGC Synpcc7942_1513 1563532 - 1564740 + | 1-deoxy-D-xylulose 5-phosphate reductoisomerase Synpcc7942_1514 1564750 - 1565349 + | pseudouridine synthase, Rsu Synpcc7942_1515 1565391 - 1566290 + | protein serine/threonine phosphatase Synpcc7942_1516 1566971 - 1566324 - | phosphoglycerate mutase TERM 887 1566883 - 1566900 + gT 75 -11.3 -3.01712 | GCTTGAGTCAGGCCG TCAGCCG TCAG CGGCTGA TCTTGGCGGCCCAGC Synpcc7942_1517 1568316 - 1566943 - | histidine kinase TERM 888 1567034 - 1566997 - GH 100 -12 -4.70659 | opp_overlap 1567001 1567019 CTCCACAGGTAAAAA GACGGTGATCACCTCA CTGGCT TGGGGCGATCGCCGTC GCACCGTCAGTTTGC TERM 889 1567059 - 1567069 + gH 71 -3.2 -4.77157 | GTTTGCCGCCCAGGG CTTG GAA CAGG TTTTTGCTGACTTCC TERM 890 1568734 - 1568715 - g 75 -9.2 -4.07568 | opp_overlap 1568707 1568728 CTGGTGCTGGCAAAA CCACCACG ATTG CGCGGCGG ATTGGCCGCTTGGTG Synpcc7942_1518 1568627 - 1570927 + | ATP-dependent helicase PcrA hisD 1572280 - 1570976 - | histidinol dehydrogenase rpsT 1572486 - 1572782 + | 30S ribosomal protein S20 TERM 891 1572925 - 1572955 + G 77 -11.8 -3.32022 | opp_overlap 1572924 1572925, overlap 1572926 1572929 CCGTAGCAGACCAAT GGCGCCAAGCGGGT GTA GCTCGCTTGGTGCA TTCCTGTGTCACGCC TERM 892 1572926 - 1572954 + G 80 -15.3 -2.58999 | opp_overlap 1572924 1572925, overlap 1572925 1572929 CGTAGCAGACCAATG GCGCCAAGCGGGT GTA GCTCGCTTGGTGC ATTCCTGTGTCACGC TERM 893 1572929 - 1572951 + G 70 -12 -2.59686 | opp_overlap 1572924 1572925, overlap 1572926 1572925 AGCAGACCAATGGCG CCAAGCGGGT GTA GCTCGCTTGG TGCATTCCTGTGTCA TERM 894 1573246 - 1573266 + G 75 -8.9 -4.13767 | overlap 1573251 TGCATTGCCGAGAGG CGGCTGCCG CCA TGGCGGCTG TTTTGCGATCGCAGC TERM 895 1573251 - 1573264 + G 72 -9.5 -3.6692 | overlap 1573246 TGCCGAGAGGCGGCT GCCGC CATG GCGGC TGTTTTGCGATCGCA Synpcc7942_1521 1572849 - 1573646 + | Sec-independent protein translocase TatD rpoB 1573729 - 1577031 + | DNA-directed RNA polymerase subunit beta Synpcc7942_1523 1577150 - 1579024 + | DNA-directed RNA polymerase subunit gamma TERM 896 1579027 - 1579054 + F 70 -10.6 -2.82407 | overlap 1579026 GTTGATCCACTAGCG TTGAGCGGCCTG CCGC CAGGTCGCTGAA GTTTCAAGTTGTCTT TERM 897 1579975 - 1579951 - g 70 -2.8 -4.75372 | gap 1 AGCAGGCATCAAAAA GGTGAAGGTGC GATC GC-CCCTGACC TGCGAAGCCGCACGA TERM 898 1580430 - 1580414 - g 80 -5.1 -4.85599 | opp_overlap 1580423, overlap 1580416 1580423 CGCACCGTAGAAAAA GCCAC CAAGGAC GTGGC GACTGATTTGGCGGG Synpcc7942_1524 1579094 - 1583050 + | DNA-directed RNA polymerase subunit beta' TERM 899 1583102 - 1583085 - f 91 -12.7 -3.76125 | opp_overlap 1583085 TGATTTGAAGCTAAA GGGGAGC GATC GCTCCCC TTTTTATTGGTATGA TERM 900 1583085 - 1583102 + F 100 -12.7 -5.16841 | opp_overlap 1583085 TGATTTGAAGCTAAA GGGGAGC GATC GCTCCCC TTTTTATTGGTATGA TERM 901 1583810 - 1583764 - g 71 -4.3 -4.58685 | gap 1, opp_overlap 1583802, overlap 1583766 AAAGCGTTGGAAAAA GGGCTGCGGCCGATCGTTGTTG TGAA CAAAATCGATCGCCCTC-GCGC TGAGCCGATGGTTGC Synpcc7942_1525 1583407 - 1585200 + | GTP-binding protein TypA TERM 902 1585231 - 1585265 + F 100 -7.9 -5.50499 | gap 1 AGATTGACTTGTAAG GGAGCTAGTCGCCGAT TATT GTCGGA-ACTGGCTCC TTTTTTTGGGTCTGG TERM 903 1586012 - 1586002 - g 70 -5.4 -4.4572 | overlap 1586003 1586006 AAGAGGTCAAACAAA CCAT CCA ATGG CTGACGATTGGGGCG Synpcc7942_1526 1585287 - 1586078 + | hypothetical protein TERM 904 1588693 - 1588674 - g 81 -4.9 -5.08824 | overlap 1588675 TGGTCACTCAAAAAA TCGCCCG CCAGCC CTGGCGA TCGCTGCTGCCCCAA Synpcc7942_1527 1586243 - 1588759 + | nitrogen assimilation regulatory protein Synpcc7942_1528 1589146 - 1588817 - | hypothetical protein Synpcc7942_1529 1589204 - 1590223 + | hypothetical protein Synpcc7942_1530 1590708 - 1590283 - | molybdenum-pterin binding domain-containing protein TERM 905 1590467 - 1590423 - G 79 -7.2 -4.65747 | gap 1 CAATTTCTAACAAAA CTTCTG-CATTCACCTGACCC ATCT GAATCTGGCGAATGACAGCAG TAAAGACGTTGCGAG Synpcc7942_1531 1590799 - 1591614 + | molybdenum ABC transporter, periplasmic molybdate-binding protein Synpcc7942_1532 1591611 - 1592276 + | molybdate ABC transporter permease Synpcc7942_1533 1592254 - 1593093 + | succinate dehydrogenase/fumarate reductase iron-sulfur subunit TERM 906 1594325 - 1594351 + G 70 -12.4 -2.62372 | overlap 1594323 1594322 1594332 CGCAATAAAGGATGT GCCAAGATTGGT GAA ACCAGTTTTGGC TACCTTAATCTTTAT Synpcc7942_1534 1593215 - 1595422 + | hypothetical protein Synpcc7942_1535 1595486 - 1595944 + | Rubisco chaperonin Synpcc7942_1536 1595934 - 1596614 + | amidotransferase Synpcc7942_1537 1596668 - 1596877 + | hypothetical protein Synpcc7942_1538 1596968 - 1597366 + | hypothetical protein Synpcc7942_1539 1597818 - 1597516 - | hypothetical protein Synpcc7942_1540 1598566 - 1597856 - | hypothetical protein Synpcc7942_1541 1599168 - 1598656 - | flavodoxin FldA Synpcc7942_1542 1600381 - 1599353 - | iron-stress chlorophyll-binding protein Synpcc7942_1543 1600652 - 1600777 + | putative ribonuclease II Synpcc7942_1544 1600802 - 1601053 + | panthotenate metabolism flavoprotein Synpcc7942_1545 1601056 - 1601511 + | plasmid stabilization protein StbB-like Synpcc7942_1546 1601489 - 1602886 + | putative ribonuclease II Synpcc7942_1547 1603415 - 1603035 - | hypothetical protein TERM 907 1603149 - 1603167 + g 81 -4.6 -5.04385 | overlap 1603150 ATTGCGAACCCATTG ATTAGCAT CGA ATGCTAAC TTTTTTAGGACTATG Synpcc7942_1548 1605638 - 1604319 - | amidase TERM 908 1605695 - 1605710 + H 71 -3.2 -4.75309 | overlap 1605706 TATTTGTTAAGGATT GCTGCG GGTG TGTAGC TTTTGTTACGTTTGC Synpcc7942_1549 1606129 - 1606689 + | SOS mutagenesis protein UmuD Synpcc7942_1550 1606746 - 1608002 + | DNA-directed DNA polymerase Synpcc7942_1551 1608052 - 1608816 + | hypothetical protein TERM 909 1609193 - 1609213 + T 74 -9.7 -3.4811 | overlap 1609192 CCTGAGCCCTTAATC CCTTCTCTC CAC GGGGGAAGG TGTTCTTCTGACCCC TERM 910 1609320 - 1609268 - T 81 -5 -5.14626 | gap 1 ATGAGCAAAATAAAA TCCGGCCAAGGAGCTGCTAACCA CTCAGGGC TAGCCATCA-CTCCTTAACCGGA TTGTTGAAACAGACT Synpcc7942_1552 1610356 - 1609373 - | ketol-acid reductoisomerase TERM 911 1610603 - 1610580 - g 70 -9.6 -3.48924 | GGAGGCTGGACAGAA GCGATCGC AGCCGCAG GCGATCGC CTCGAAATTGTGCCG TERM 912 1610942 - 1610928 - g 70 -2.8 -4.72272 | GTGCCCTACGAAAAA CTGGAT GTG ATCGAG GGAATTCGCTGGCTA TERM 913 1611237 - 1611210 - g 100 -15.6 -4.20367 | GCCCTGAATAAACAA GCGGTCCCAACC GGCT GGCTGGAACCGC TGCGTAATGCTGCTG Synpcc7942_1553 1610364 - 1611257 + | phosphoesterase PHP-like Synpcc7942_1554 1611853 - 1611260 - | ATP-dependent Clp protease proteolytic subunit Synpcc7942_1555 1611906 - 1612748 + | Thf1-like protein Synpcc7942_1556 1612870 - 1613448 + | hypothetical protein Synpcc7942_1557 1614396 - 1613464 - | principal RNA polymerase sigma factor SigA TERM 914 1614922 - 1614944 + H 100 -11.2 -4.70583 | GTCTCAGTCGCTGTT GGGCGGGGCC TAG GGTCTTGCCC TTTTGTCTTGCTAAA Synpcc7942_1558 1615204 - 1616271 + | hypothetical protein Synpcc7942_1559 1616284 - 1616958 + | hypothetical protein Synpcc7942_1560 1617134 - 1617292 + | hypothetical protein Synpcc7942_1561 1618687 - 1618181 - | hypothetical protein Synpcc7942_1562 1619696 - 1618800 - | ADP-ribosylglycohydrolase-like TERM 915 1619818 - 1619780 - R 81 -12.5 -3.17723 | gap 1, overlap 1619782 1619784 GGACTCGCAATTTAA GAGA-GCCACCTAGTGGC GATC GCCACTAGGTGGCGTGAC AAGTCACAATTGCGC TERM 916 1619815 - 1619782 - R 100 -15.3 -3.15056 | overlap 1619780 1619784 ACTCGCAATTTAAGA GAGCCACCTAGTGGC GATC GCCACTAGGTGGCGT GACAAGTCACAATTG TERM 917 1619813 - 1619784 - R 100 -22.3 -3.1352 | overlap 1619782 1619780 TCGCAATTTAAGAGA GCCACCTAGTGGC GATC GCCACTAGGTGGC GTGACAAGTCACAAT Synpcc7942_1563 1621512 - 1621096 - | signal transduction inhibitor TERM 918 1621167 - 1621177 + g 76 -5.4 -4.72272 | AAAATCGGGTGCCTA GAAC TAA GTTC TTTTTCGTCAGCCCA Synpcc7942_1564 1621903 - 1622220 + | hypothetical protein Synpcc7942_1565 1622970 - 1623410 + | hypothetical protein Synpcc7942_1566 1623449 - 1625644 + | polyphosphate kinase Synpcc7942_1567 1626019 - 1625702 - | ribosomal protein L36 Synpcc7942_1568 1626596 - 1626357 - | hypothetical protein Synpcc7942_1569 1627115 - 1626654 - | hypothetical protein Synpcc7942_1570 1629449 - 1627206 - | heavy metal translocating P-type ATPase TERM 919 1628943 - 1628973 + g 87 -11.8 -4.07687 | opp_overlap 1628928 GGCGGCACCGGTTCC CACTGCCACCAAGG TAT CCATCGTGGCGGTG TTTTGACGGAAGGCT Synpcc7942_1571 1630063 - 1630872 + | MIP family channel protein TERM 920 1632401 - 1632384 - g 77 -11.3 -3.69216 | overlap 1632382 GCTTCATCCAAAATA CGGGCAA TGTG TTGCCCG ACATGATGCCGGCTG Synpcc7942_1572 1631339 - 1632925 + | dehydrogenase subunit-like protein Synpcc7942_1573 1632994 - 1633794 + | 3-oxoacyl-(acyl-carrier protein) reductase Synpcc7942_1574 1633895 - 1636567 + | glucosidase Synpcc7942_1575 1636580 - 1638625 + | glycogen debranching protein TERM 921 1638894 - 1638931 + G 74 -7.7 -4.21194 | GGCCGGAATTAGTTG CCTCAGTCCTGCTGTCT AGCG GGATGGTAGCACTGGGG TTTTACCTGATGCGC TERM 922 1638994 - 1639005 + G 83 -3.6 -5.30686 | opp_overlap 1638992, overlap 1638992 1638991 TCCCCAAATTGAAGG CTGG CTAG CCGG TTTTTTCTCACTGTT Synpcc7942_1576 1638668 - 1640059 + | chloride channel protein argS 1642033 - 1640261 - | arginyl-tRNA synthetase Synpcc7942_1578 1643011 - 1642172 - | Sec-independent protein translocase TatC Synpcc7942_1579 1643490 - 1643957 + | dual specificity protein phosphatase Synpcc7942_1580 1644436 - 1644011 - | hypothetical protein TERM 923 1644534 - 1644491 - H 77 -8.8 -4.07568 | gap 1, overlap 1644476 1644475 GGCTGGGGGGTAAAA CG-CCGAAGCCAAGCGACAAC CTA GCCATCGTGTGGCTCCGGACG CTGCTTGGGTCGCAT TERM 924 1645374 - 1645387 + G 76 -6.7 -4.62302 | overlap 1645381 1645382 1645385 AGCTAGCAGCTTCTA GTGCA TGTC TGCAC TTTTTGCAGGTGTTG TERM 925 1646060 - 1646049 - g 77 -7.2 -4.44667 | opp_overlap 1646056 CGGGTGAAGAACAAA CCGG CTAT CCGG CGATCGGGGTTTATG Synpcc7942_1581 1645142 - 1646821 + | peptidase M14, carboxypeptidase A trmE 1648211 - 1646823 - | tRNA modification GTPase TrmE TERM 926 1647070 - 1647086 + gF 72 -10.1 -3.37975 | TCGCCAGTTCCGACT GCTGCCA GAA TGGCGGC TTCTAAATCCTCAAT Synpcc7942_1584 1650160 - 1648682 - | hypothetical protein Synpcc7942_1583 1648210 - 1648746 + | hypothetical protein Synpcc7942_1585 1650986 - 1650201 - | N-acetylmuramoyl-L-alanine amidase TERM 927 1651879 - 1651910 + G 72 -2.2 -4.89393 | gap 1, overlap 1651881 1651883 1651907 GCTTTGGCAGTGCTC TGATGCTGGTTGCGG TGG CGGCAACCGGC-TGG TTTTTATCAGGTTTG TERM 928 1651883 - 1651907 + G 77 -12.1 -3.32317 | overlap 1651881 1651879 TGGCAGTGCTCTGAT GCTGGTTGCGG TGG CGGCAACCGGC TGGTTTTTATCAGGT Synpcc7942_1586 1651359 - 1652669 + | periplasmic sensor signal transduction histidine kinase Synpcc7942_1587 1653172 - 1652732 - | integral membrane protein-like Synpcc7942_1588 1655834 - 1653255 - | CBS Synpcc7942_1589 1657270 - 1655981 - | putative modulator of DNA gyrase TERM 929 1656120 - 1656137 + g 73 -8.4 -4.1899 | ATGGTGTCTTTGACT CGGCCA GTGATG TGGCCG TTTTGAATGCGATAG Synpcc7942_1590 1658131 - 1657274 - | hypothetical protein TERM 930 1657344 - 1657308 - G 73 -8 -4.08144 | gap 1, overlap 1657301 CGCAGCAACCAGAAA CCG-GCAAAGCGATCGC TGTT GGGATCGACTTGCACGG CCAAGAAGTGCAGTC Synpcc7942_1591 1659022 - 1658135 - | RNA binding S1 Synpcc7942_1592 1659119 - 1659934 + | creatinine amidohydrolase Synpcc7942_1593 1660025 - 1660720 + | hypothetical protein Synpcc7942_1594 1660735 - 1661760 + | hypothetical protein TERM 931 1662102 - 1662118 + G 71 -4.4 -4.63218 | gap 1 TGGTGTTGGTGCGCT CGAC-GG CCAG CCAGTCG TTTTCTTGGGCCACC Synpcc7942_1595 1661770 - 1662753 + | acetyl-CoA carboxylase carboxyltransferase subunit alpha Synpcc7942_1596 1662871 - 1663608 + | short chain dehydrogenase TERM 932 1663584 - 1663602 + F 70 -5.9 -4.18494 | GGATGAGCTGACCCT CATGCCC AATGC GGGCACG TTTTAGATCGGAATC folE 1663657 - 1664298 + | GTP cyclohydrolase I TERM 933 1665037 - 1665050 + G 82 -2.3 -5.40474 | GCTGGAAGTGGAAGT CGTGG GCGA TCGCG TTTTTTTACGGGGCT Synpcc7942_1598 1664306 - 1665100 + | phenazine biosynthesis PhzC/PhzF protein Synpcc7942_1599 1665097 - 1666182 + | hypothetical protein Synpcc7942_1600 1666188 - 1667030 + | 5',5'''-P-1,P-4-tetraphosphate phosphorylase II-like Synpcc7942_1601 1667231 - 1667058 - | hypothetical protein Synpcc7942_1602 1667296 - 1668033 + | RNA methyltransferase TrmH, group 1 TERM 934 1668966 - 1668981 + G 91 -9 -5.11937 | overlap 1668956 1668960 TTCGCTCCTCGATCC GCGATC GCGC GATCGC TTTTTTGCCGTTCTT Synpcc7942_1603 1668136 - 1669263 + | beta-lactamase TERM 935 1670379 - 1670347 - g 73 -9 -3.90588 | opp_overlap 1670349 GACCGGCTAAGCAAA GGGGGGCTGCGCTT CTTTC AAGCGCTGCCCAAC GCCACGTTCTTTCGA Synpcc7942_1604 1669273 - 1670625 + | hypothetical protein Synpcc7942_1605 1671208 - 1670630 - | hypothetical protein Synpcc7942_1606 1671451 - 1672011 + | Beta-Ig-H3/fasciclin TERM 936 1672063 - 1672086 + T 100 -15.4 -3.81287 | opp_overlap 1672063 TGGATTCTAGAAAAA GTCCTGTCAG CTTG CTGACAGGAC TTTCATCATGGTGTG TERM 937 1672086 - 1672063 - T 100 -15.4 -4.85599 | opp_overlap 1672063 TGGATTCTAGAAAAA GTCCTGTCAG CTTG CTGACAGGAC TTTCATCATGGTGTG Synpcc7942_1607 1673679 - 1672123 - | porin; major outer membrane protein TERM 938 1673046 - 1673069 + g 71 -7.4 -4.09511 | GGTTGGTAATTGGCT CAATGTTGCG GGCG CGCAGCCTTG TTTTCAGGAGGTCTT TERM 939 1674343 - 1674320 - g 74 -10.2 -3.55444 | GTGCCACCGTTCAAA CGGCGATCGC GCTA GCGACGGCCG GCCATTTAGTTACTT Synpcc7942_1608 1673935 - 1675344 + | mannose-1-phosphate guanylyltransferase (GDP) TERM 940 1677400 - 1677385 - g 70 -3.2 -4.7497 | GGCAGTCAGGAAAAA GGCG TGAGCGTG CGCC TTGCCCAAAGTGATT Synpcc7942_1609 1675456 - 1678869 + | protein splicing (intein) site TERM 941 1678937 - 1678907 - T 100 -18.5 -5.00616 | opp_overlap 1678910 TTTCTGCTGAAAAAA GAAGCCCTCTTCA GTCTT TGAAGAGGGCTTC TTAGGCATTCAAGGG TERM 942 1678910 - 1678934 + T 100 -15.1 -3.65314 | opp_overlap 1678907 CTGCTGAAAAAAGAA GCCCTCTTCAG TCT TTGAAGAGGGC TTCTTAGGCATTCAA Synpcc7942_1610 1680389 - 1678977 - | pyridine nucleotide transhydrogenase beta subunit TERM 943 1680260 - 1680244 - G 84 -13.7 -3.68529 | AGGTCAGGATGGAAA GCGGTGC CCA GCACCGC CAAACCCATGCCCGC Synpcc7942_1611 1680682 - 1680389 - | nicotinamide nucleotide transhydrogenase alpha subunit-like Synpcc7942_1612 1681905 - 1680679 - | pyridine nucleotide transhydrogenase alpha subunit Synpcc7942_1613 1682042 - 1682617 + | hypothetical protein rpmH 1682665 - 1682802 + | 50S ribosomal protein L34 TERM 944 1682864 - 1682895 + G 79 -7.2 -4.66318 | overlap 1682865 1682866 1682868 CTTCCCAGCACTGTA TCGAGGGGGTCGAA AACT TTCGACGCCCTCAC TTTTGTTGCGCTGGT TERM 945 1682865 - 1682894 + G 72 -10.7 -3.39068 | overlap 1682864 1682866 1682868 TTCCCAGCACTGTAT CGAGGGGGTCGAA AACT TTCGACGCCCTCA CTTTTGTTGCGCTGG TERM 946 1682866 - 1682893 + G 78 -14.2 -2.62958 | overlap 1682865 1682864 1682868 TCCCAGCACTGTATC GAGGGGGTCGAA AACT TTCGACGCCCTC ACTTTTGTTGCGCTG rnpA 1682808 - 1683176 + | ribonuclease P Synpcc7942_1616 1683163 - 1683549 + | hypothetical protein Synpcc7942_1617 1683752 - 1684930 + | putative inner membrane protein translocase component YidC TERM 947 1685321 - 1685301 - g 79 -7.6 -4.5442 | gap 1 TGGGGAACCAGAAAA GCTGGAGGA CTAT TCCTCC-GC CGATCGCCGAGTGCT Synpcc7942_1618 1684927 - 1685433 + | single-stranded nucleic acid binding R3H Synpcc7942_1619 1685436 - 1685942 + | metal-binding protein Synpcc7942_1620 1685939 - 1687444 + | ATPase Synpcc7942_1621 1689152 - 1687584 - | Elongator protein 3/MiaB/NifB Synpcc7942_1622 1689721 - 1692192 + | proteinase TERM 948 1692825 - 1692837 + G 73 -5.5 -4.62069 | ATTGCTCGGCCGTCC GCTGG GAC TCAGC TTTTTAGGATCAAGC Synpcc7942_1623 1692265 - 1692957 + | hypothetical protein Synpcc7942_1624 1693644 - 1692985 - | riboflavin synthase subunit alpha Synpcc7942_1625 1694921 - 1693698 - | glycosyltransferase TERM 949 1694582 - 1694565 - G 71 -7 -4.25283 | opp_overlap 1694551 1694565 1694564 ACTGCGGTAGTAAAA CTCGCA GTAGAT TGCGAG CTTTGCAGCCGGCCA Synpcc7942_1626 1695550 - 1695068 - | hypothetical protein Synpcc7942_1627 1696852 - 1695554 - | hypothetical protein TERM 950 1695863 - 1695845 - G 74 -4.5 -4.70659 | TGGCACAGCTAAAAA GCCGATC GCGTA GACCAGC AGGAACCGATATAAC Synpcc7942_1628 1697252 - 1697971 + | hypothetical protein Synpcc7942_1629 1698071 - 1698712 + | hypothetical protein Synpcc7942_1630 1698933 - 1699268 + | cytochrome c6 Synpcc7942_1631 1699269 - 1700168 + | TPR repeat-containing protein Synpcc7942_1632 1700263 - 1700772 + | hypothetical protein TERM 951 1701681 - 1701692 + G 79 -2.2 -5.1861 | TATGCTGCGTTGCAA GTGG ATGA TCAC TTTTTTGCTGATCCC Synpcc7942_1633 1701369 - 1702091 + | hypothetical protein Synpcc7942_1634 1702652 - 1702113 - | hypothetical protein Synpcc7942_1635 1704469 - 1702823 - | porin; major outer membrane protein phhB 1705013 - 1704606 - | pterin-4-alpha-carbinolamine dehydratase TERM 952 1705154 - 1705118 - R 93 -8.8 -5.03145 | gap 1, opp_overlap 1705122, overlap 1705121 1705122 TAATTGCTCAAAAAA CTA-TCCGCTCCCTATC AGAT GACAAGGAGCGGTCTAG TCGGGTCTATGACGT TERM 953 1705150 - 1705121 - R 76 -10.7 -3.37655 | opp_overlap 1705122, overlap 1705118 1705122 TTGCTCAAAAAACTA TCCGCTCCCTATC AGAT GACAAGGAGCGGT CTAGTCGGGTCTATG TERM 954 1705149 - 1705122 - R 84 -14.2 -2.62111 | opp_overlap 1705122, overlap 1705121 1705118 TGCTCAAAAAACTAT CCGCTCCCTATC AGAT GACAAGGAGCGG TCTAGTCGGGTCTAT TERM 955 1705255 - 1705271 + r 72 -7.9 -3.86346 | overlap 1705256 TGCTCAGAGGACGGT TCCGGCT CAC AGCCGGC TTTCTCCAACGATCA TERM 956 1705256 - 1705270 + r 75 -11.4 -2.91593 | overlap 1705255 GCTCAGAGGACGGTT CCGGCT CAC AGCCGG CTTTCTCCAACGATC Synpcc7942_1637 1706484 - 1705426 - | photosystem II D2 protein (photosystem q(a) protein) TERM 957 1706538 - 1706528 - H 70 -6.8 -4.053 | overlap 1706532 ATCAGTTCAGAGAAA CGCA GTT TGCG ACAAACATGGATGAT Synpcc7942_1638 1706685 - 1706951 + | hypothetical protein Synpcc7942_1639 1707135 - 1707776 + | ATPase TERM 958 1708320 - 1708304 - g 74 -4.3 -4.74103 | overlap 1708306 GCTTCAATTCAAAAA GTTCGCC AGT GGCAAGC CCAGCAACGGCGCAA Synpcc7942_1640 1707881 - 1708414 + | hypothetical protein Synpcc7942_1641 1708665 - 1709165 + | hypothetical protein Synpcc7942_1642 1709180 - 1710250 + | hypothetical protein TERM 959 1711585 - 1711572 - g 73 -8.1 -4.17089 | opp_overlap 1711583 CCCAAACTCTCAAAA CTGGC ATCC GCCAG AATCAAGATTTTGTT Synpcc7942_1643 1710353 - 1711873 + | diguanylate cyclase with GAF sensor TERM 960 1711918 - 1711894 - f 72 -7.8 -3.92592 | ACTGCCAAGATCAAA GGTAGGTCTG GGCAA CAGCCCCACC ACTGACCCCTTAATA Synpcc7942_1644 1712014 - 1712817 + | hypothetical protein TERM 961 1713286 - 1713260 - f 100 -13.8 -3.64466 | opp_overlap 1713249 ATCCCAGAGAGATAA CTGCCCTCTGTC TTC GACAGAGAACAG AACCCGGCTTATGTC Synpcc7942_1645 1713332 - 1714075 + | RNAse III Synpcc7942_1646 1714348 - 1715070 + | hypothetical protein TERM 962 1715155 - 1715121 - f 77 -10.1 -3.67597 | opp_overlap 1715125, overlap 1715125 CTTGGGAGCGAAGAA GGAAGATGTTGAGCG GCAAT CGCTCAACATCTTTT CAATGATTCCTGAAT TERM 963 1715125 - 1715151 + F 100 -16 -4.24294 | opp_overlap 1715125 1715121 GGAGCGAAGAAGGAA GATGTTGAGCGG CAA TCGCTCAACATC TTTTCAATGATTCCT TERM 964 1715151 - 1715125 - f 100 -15.3 -3.54902 | opp_overlap 1715125, overlap 1715121 GGAGCGAAGAAGGAA GATGTTGAGCG GCAAT CGCTCAACATC TTTTCAATGATTCCT Synpcc7942_1647 1715266 - 1716186 + | hypothetical protein Synpcc7942_1648 1716638 - 1716189 - | ferric uptake regulator family protein TERM 965 1716497 - 1716543 + g 72 -10 -3.64703 | ACTCTTGATTGATGT CCTGCAGGATTGTCTCGACCGT GGG ATGGTCATGGCGACCCAGCAGG TTTGCATAGACCGCA Synpcc7942_1649 1716788 - 1717504 + | rubrerythrin TERM 966 1717721 - 1717739 + T 82 -8.1 -4.55287 | CTCAGCGAGGGAGTT CAGCCGG AGATG CCGGTTG TTTTGTCTCGCTCAA Synpcc7942_1650 1720946 - 1717707 - | phosphorylase kinase alpha subunit TERM 967 1717805 - 1717835 + g 78 -13.4 -3.21416 | opp_overlap 1717812, overlap 1717811 GCTCGGGCGATCGCT GATAGAACTGCTGC CAA GCAGCAGCTTTATC TTCGTCATAGCGATC TERM 968 1717811 - 1717829 + g 79 -8.8 -4.24745 | opp_overlap 1717812, overlap 1717805 GCGATCGCTGATAGA ACTGCTGC CAA GCAGCAGC TTTATCTTCGTCATA TERM 969 1717828 - 1717812 - G 78 -12.3 -3.48924 | opp_overlap 1717811 1717805 CGATCGCTGATAGAA CTGCTGC CAA GCAGCAG CTTTATCTTCGTCAT TERM 970 1718189 - 1718176 - G 72 -2.3 -4.90455 | ACACACGGATAAAAA CGAGT CGGA ACGCG ATTGAGAGCTCCTTC TERM 971 1721373 - 1721384 + G 79 -2.2 -5.27938 | CAAGCAGCGGGTTTA GGCT GGCA AGTC TTTTTCTTTGGCGGT Synpcc7942_1651 1721058 - 1721795 + | N-acetylmannosaminyltransferase TERM 972 1723180 - 1723200 + G 71 -8.2 -3.95435 | opp_overlap 1723169 TCAAGCGCTGATCTC CAGAGGCG ATCGC CGCCTCAG TTCTCTTTTAGAACG Synpcc7942_1652 1721792 - 1723432 + | Elongator protein 3/MiaB/NifB gldA 1724736 - 1723540 - | glycerol dehydrogenase TERM 973 1723691 - 1723670 - G 70 -5.1 -4.44245 | overlap 1723672 ATATTACCGACAAAA GGGAAGCCT AATG AAGCTTCAC TAACGATCTCTAAAG TERM 974 1724505 - 1724482 - G 70 -9.6 -3.53563 | overlap 1724502 1724504 ACATTCGCCCTGAAA GGTGCTGACG ACAG CATCAACACC AGCCGATCGCAGTCC Synpcc7942_1654 1725232 - 1724849 - | hypothetical protein Synpcc7942_1655 1725829 - 1725260 - | hypothetical protein TERM 975 1725416 - 1725403 - G 73 -5.3 -4.59773 | TTGGAGTGTCAAAAA TCATC ATCT GATGA TTAACAAAGAATGGA TERM 976 1725898 - 1725867 - R 81 -6.6 -4.61527 | AAAACTTCCTAAAAA TCCCCACACCGC AGCAATTA ACAATGTGGGGA TGGATTTAGAGAGTT Synpcc7942_1656 1728081 - 1725919 - | catalase/peroxidase HPI TERM 977 1727049 - 1727066 + g 79 -6.9 -4.72029 | TAATCGGTTCCCACT GCCATGC GCCT GCAGGGC TTTTCTTCAGTTCCC TERM 978 1728489 - 1728505 + G 78 -12.3 -3.40597 | overlap 1728488 CTCATCTTTTGGGGC GCGATCG CAG CGATCGC TGTTTGGCTGGGCAG Synpcc7942_1657 1728453 - 1728674 + | hypothetical protein TERM 979 1728705 - 1728680 - T 100 -15.5 -4.37527 | opp_overlap 1728680 1728671 CCAGAATTAGCAAAA GCGCCCCTTGA GCGA TCAAGAGGCGC TTCAGTCAGCTTTTG TERM 980 1728680 - 1728705 + T 83 -13.3 -3.09681 | opp_overlap 1728680, overlap 1728671 CCAGAATTAGCAAAA GCGCCCCTTGA GCGA TCAAGAGGCGC TTCAGTCAGCTTTTG Synpcc7942_1658 1729246 - 1728788 - | hypothetical protein TERM 981 1728836 - 1728822 - G 71 -9.2 -3.72576 | CCGCGGGCCATCAAA GCCGCC AGC AGCGGC AGAATCACGAAAGCA Synpcc7942_1659 1729384 - 1730031 + | nitroreductase TERM 982 1730568 - 1730587 + G 72 -2 -4.9792 | GCGATCGCTCCGCAG CAGTGTAC GACG GATCACTG TTTTTCTCTGCGGTG Synpcc7942_1660 1730131 - 1730964 + | potassium channel protein TERM 983 1731104 - 1731127 + F 70 -6.1 -4.15201 | TAGGGTCAGTTCGTT CTTAGGTGA CCTGTT TCATCTAAG TTTGCTTTCCTTCCT Synpcc7942_1661 1731159 - 1731722 + | hypothetical protein TERM 984 1731758 - 1731784 + T 91 -12.4 -3.76224 | overlap 1731753 TCGACTGAACCTTGG CATCCCCAGA CTTTTGA TCTGGGGATG TTTACTGAATGGGAA cysS 1733247 - 1731811 - | cysteinyl-tRNA synthetase TERM 985 1732410 - 1732436 + g 72 -2.2 -5.00616 | GCAGCTGGCGGATCG TGGTGAAGTTGC CCA GCGACTTGGACA TTTTTTCGCCGCCAA Synpcc7942_1663 1733760 - 1733401 - | hypothetical protein Synpcc7942_1664 1733790 - 1733984 + | hypothetical protein TERM 986 1734832 - 1734822 - g 74 -6.8 -4.46615 | CAGCAGCAATCAAAA GGAC TAC GTCC ACGGCTTTCAGGTCT Synpcc7942_1665 1733989 - 1735104 + | oxidoreductase Synpcc7942_1666 1735859 - 1735155 - | hypothetical protein TERM 987 1735640 - 1735622 - G 84 -3.1 -5.41746 | overlap 1735624 1735625 AATGCGCCAAAAAAA CATCCCC GCAGG GGGAATA GCGGCGTGCTTCTTT TERM 988 1735637 - 1735624 - G 77 -8.1 -4.34482 | overlap 1735622 1735625 TGCGCCAAAAAAACA TCCCC GCAG GGGGA ATAGCGGCGTGCTTC murD 1735965 - 1737356 + | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase TERM 989 1738270 - 1738289 + G 80 -5 -4.93696 | gap 1 GCCTCAGCAATGCCA GCCAGATCG GGG TGATC-GGC TTTTTGATGTTTACC Synpcc7942_1668 1737882 - 1739552 + | potassium-transporting ATPase subunit A Synpcc7942_1669 1739595 - 1741685 + | potassium-transporting ATPase subunit B Synpcc7942_1670 1741687 - 1741833 + | hypothetical protein Synpcc7942_1671 1741836 - 1742447 + | potassium-transporting ATPase, C subunit Synpcc7942_1672 1742508 - 1743233 + | M15B family D-Ala-D-Ala carboxypeptidase VanY Synpcc7942_1673 1743854 - 1743189 - | hypothetical protein TERM 990 1743821 - 1743789 - G 85 -12.8 -3.75024 | gap 1, overlap 1743790 GTTGACCATCAACAA CGTCCCCCCGATCGC ACCA GCAATCAGGGGGA-G ACGCCGCAGCCAAAC TERM 991 1743821 - 1743790 - G 74 -13 -2.84693 | overlap 1743789 TTGACCATCAACAAC GTCCCCCCGATCGC ACCA GCAATCAGGGGGAG ACGCCGCAGCCAAAC Synpcc7942_1674 1744166 - 1743855 - | hypothetical protein Synpcc7942_1675 1744766 - 1744281 - | hypothetical protein Synpcc7942_1676 1745469 - 1744816 - | hypothetical protein Synpcc7942_1677 1746597 - 1745500 - | hypothetical protein TERM 992 1745623 - 1745583 - G 71 -11.2 -3.13403 | gap 1, overlap 1745581 CCGGCGCTAGCAACA GCCCATTGCGATAGTGAGC CGTC GC-CACAATCACATTGGGC CAGTCCGTCAGGCGC Synpcc7942_1678 1747153 - 1746611 - | hypothetical protein TERM 993 1747045 - 1747030 - G 72 -6.1 -4.45664 | GCAAGGTAACCAAAA CGAGC GCAACG GCTCG ACGACAACGAGACCA Synpcc7942_1679 1747252 - 1747590 + | photosystem II reaction center protein Psb28 Synpcc7942_1680 1748858 - 1747842 - | sulphate transport system permease protein 1 TERM 994 1749007 - 1748978 - H 88 -8.7 -4.70659 | opp_overlap 1748978 GCGCACAGTGAAAAA TCTACGGTATCCC CGAA AAAATACCGTAGA TTGCTTCCTCCGCTG Synpcc7942_1681 1749076 - 1750128 + | thiosulphate-binding protein TERM 995 1750505 - 1750493 - g 75 -6.3 -4.56597 | opp_overlap 1750493 CTTCCCGGGCAAAAA GCTAT TTG ATAGC TTCATCGATCTCCCC Synpcc7942_1682 1750203 - 1751039 + | sulphate transport system permease protein 2 Synpcc7942_1683 1751063 - 1751308 + | hypothetical protein Synpcc7942_1684 1751336 - 1751956 + | CRP/FNR family transcriptional regulator Synpcc7942_1685 1752002 - 1752862 + | sulphate transport system permease protein 2 TERM 996 1752889 - 1752919 + F 95 -9.1 -4.89966 | TGAAATTTCTTTCGG CGGAATGATTGGA AGTTC TTCATTCATTCCG TTTCTTTTTGAATCT TERM 997 1752966 - 1752949 - f 71 -2.7 -4.83615 | TATTTTTTACAAAAA TTGTCCT CTAG ATGACAA GCTTCCGCGTCAGCT Synpcc7942_1686 1753022 - 1754047 + | thiosulphate-binding protein TERM 998 1754773 - 1754759 - g 70 -5.6 -4.37092 | ACCTGCCCTACAAAA CCTTGG TCG CCACGG TCTACGTCTATCAGC Synpcc7942_1687 1754047 - 1754913 + | Sulfate ABC transporter, permease protein CysT Synpcc7942_1688 1754913 - 1755773 + | Sulfate ABC transporter, permease protein CysW TERM 999 1755929 - 1755966 + G 70 -5.3 -4.39954 | overlap 1755930 1755932 TATGTCCGTGCGATC GCTCCGCTGGCCGCGCC AAAA GGCGTTCCTAGCGGTGA TTTCTCTTGTTGTTG Synpcc7942_1689 1755915 - 1756877 + | rhodanese-like protein Synpcc7942_1690 1756898 - 1757137 + | hypothetical protein Synpcc7942_1691 1757155 - 1758315 + | hypothetical protein Synpcc7942_1692 1759329 - 1758418 - | mrr restriction system protein Synpcc7942_1693 1759819 - 1759418 - | response regulator receiver domain-containing protein TERM 1000 1759735 - 1759750 + g 71 -4.6 -4.59853 | opp_overlap 1759710 CTTCACAGTGCTGGA CGGTGT AGCC ACCCCG TTTTTCCAAGATTCG Synpcc7942_1694 1759930 - 1762506 + | DNA topoisomerase IV subunit A Synpcc7942_1695 1762639 - 1763637 + | hypothetical protein TERM 1001 1763689 - 1763654 - T 70 -10.6 -2.82936 | gap 1, opp_overlap 1763646 1763653 1763653, overlap 1763653 1763646 ACTGAAAGGCTAAAG GTCTGAGCCCTGTTCTC ATC GA-AACAGGGCTCAAAG GTTGCCTCTGGCTGA Synpcc7942_1696 1764452 - 1763712 - | hypothetical protein Synpcc7942_1697 1764892 - 1764611 - | Zn-finger, CDGSH type Synpcc7942_1698 1765087 - 1765428 + | putative transcriptional regulator Synpcc7942_1699 1766852 - 1765464 - | MATE efflux family protein TERM 1002 1766583 - 1766602 + g 71 -4.2 -4.58303 | CGACAGCCACAGACC TTGTCGCG CGAT CGCCGCAA TTTTGTAGTCTTTAC TERM 1003 1766712 - 1766696 - G 71 -6.5 -4.2237 | overlap 1766697 1766709 AAATGAACTGGAAAA GGGCTGA AGC TAAGCCC CCAGCCGCCAAGGGC Synpcc7942_1700 1767849 - 1766905 - | GDP-fucose synthetase NAD dependent epimerase/dehydratase TERM 1004 1767717 - 1767700 - G 100 -11.3 -5.02476 | ATACTCGGCAAAAAA GCGATCG ACCG CGATCGC ATCCCGCAGATCCAC Synpcc7942_1701 1767953 - 1768489 + | hypothetical protein Synpcc7942_1702 1768545 - 1768682 + | hypothetical protein Synpcc7942_1703 1772017 - 1768940 - | putative alpha-mannosidase Synpcc7942_1704 1772024 - 1772833 + | hypothetical protein Synpcc7942_1705 1772946 - 1773065 + | photosystem II reaction center I protein I TERM 1005 1773094 - 1773117 + F 95 -12.4 -4.28188 | opp_overlap 1773094 CCAATCACCATAGAA GCCACCGGCA AATT TGCGGGTGGC TTTGTCTTGTGAATG TERM 1006 1773117 - 1773094 - f 88 -12.4 -3.57731 | opp_overlap 1773094 CCAATCACCATAGAA GCCACCGGCA AATT TGCGGGTGGC TTTGTCTTGTGAATG Synpcc7942_1706 1773234 - 1775426 + | hypothetical protein TERM 1007 1775482 - 1775499 + F 72 -4.9 -4.61527 | gap 1, opp_overlap 1775477 1775476, overlap 1775477 AAGTAACAACTGCTC GTG-AGCA ATT TGCTACAC TTTTTACCAAATTTT Synpcc7942_1707 1775633 - 1776064 + | hypothetical protein TERM 1008 1776502 - 1776520 + G 86 -7.4 -4.86731 | TATTTCCAATCTGAC CCTTTTGG TGT CCAAGGGG TTTTATTTGCCGAGG Synpcc7942_1708 1776199 - 1778226 + | oligopeptidase A TERM 1009 1778256 - 1778296 + T 71 -9.2 -3.5393 | gap 1, opp_overlap 1778262 1778263, overlap 1778254 1778257 1778263 1778264 TCTAGCGAAGCCGTC GTGAAAGTTCCTCTCTCGA GTTT TTGGGAGAGG-ACTTTCAG TTTGGAGGCGATCGT TERM 1010 1778257 - 1778295 + T 77 -12.7 -2.72144 | gap 1, opp_overlap 1778262 1778263, overlap 1778254 1778256 1778263 1778264 CTAGCGAAGCCGTCG TGAAAGTTCCTCTCTCGA GTTT TTGGGAGAGG-ACTTTCA GTTTGGAGGCGATCG TERM 1011 1778264 - 1778289 + T 71 -10.5 -2.90349 | opp_overlap 1778262 1778263, overlap 1778254 1778263 1778257 1778256 AGCCGTCGTGAAAGT TCCTCTCTCGA GTTT TTGGGAGAGGA CTTTCAGTTTGGAGG Synpcc7942_1709 1779889 - 1778348 - | small GTP-binding protein domain-containing protein TERM 1012 1779043 - 1779030 - G 89 -8.1 -5.00616 | TCTGGCTGCAAAAAA CTGCC ATCC GGCAG GCGTACGGGTTGGGG Synpcc7942_1710 1780048 - 1780278 + | DNA-directed RNA polymerase subunit omega Synpcc7942_1711 1780275 - 1780847 + | hypothetical protein TERM 1013 1780958 - 1780977 + G 74 -2.7 -4.86001 | opp_overlap 1780959, overlap 1780959 TGGGCAGTTGAACTG ACCGCCG CTGAGA TGGCGGA TTTTTGTCGACTCGT Synpcc7942_1712 1780853 - 1781218 + | hypothetical protein TERM 1014 1781595 - 1781619 + G 75 -9.3 -4.15006 | CGCTTGGATTGCCGG GTTGCTGTCGT TCT ACAACAGCAGC TTTTACCGTCGCTAT Synpcc7942_1713 1781317 - 1782219 + | hydrocarbon oxygenase MocD Synpcc7942_1714 1782216 - 1783232 + | hypothetical protein upp 1783903 - 1783250 - | uracil phosphoribosyltransferase Synpcc7942_1716 1787655 - 1783939 - | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) Synpcc7942_1717 1789025 - 1787724 - | glycolate oxidase subunit (Fe-S) protein Synpcc7942_1718 1790305 - 1789028 - | glycolate oxidase subunit GlcE TERM 1015 1790339 - 1790312 - R 85 -7 -4.7497 | gap 1 CGCAGGCATGAAAAA GGTGCTCCAGACA AGA CG-CTTGAGCACC AACTTACCAGTTTGC Synpcc7942_1719 1791796 - 1790369 - | isocitrate dehydrogenase Synpcc7942_1720 1791952 - 1792392 + | hypothetical protein TERM 1016 1793108 - 1793128 + T 75 -4.8 -4.76963 | gap 1, overlap 1793110 TCTCAACTAACAGCT GA-TCCACT ACGG AGTGGAATC TTTTCTGTTGTCTGA TERM 1017 1793141 - 1793158 + T 70 -9.9 -3.16785 | overlap 1793139 1793137 ATCTTTTCTGTTGTC TGAAGCC CAGT GGCTTCA TCTATTACTGTAGTC Synpcc7942_1721 1793916 - 1793212 - | HEAT repeat-containing PBS lyase TERM 1018 1794108 - 1794081 - R 100 -13.4 -5.1361 | opp_overlap 1794079 ACAAAGCTGAAAAAA GCCCCGAGGGAG CAAA CTTCCTCGAGGC GATCGTTTGGGGTGA Synpcc7942_1722 1795228 - 1794143 - | thiosulphate-binding protein TERM 1019 1795730 - 1795681 - g 71 -11.4 -3.21099 | gap 2 TTTGGTCAGGACTAA GCCGCTGGCCCAGCACCAACCCGC TAGC GCAGGT-GCTGC-GGGCGATCGGC GAAGAGGTGCCAGTT Synpcc7942_1723 1795482 - 1797032 + | carotene isomerase Synpcc7942_1724 1797386 - 1797078 - | hypothetical protein TERM 1020 1798923 - 1798941 + G 77 -7.4 -4.42386 | CCAGCGACAAATCAT CATTGCGC CCG GCGTGATG TTTTCTCCGTCCGGC Synpcc7942_1725 1797616 - 1799067 + | GntR family transcriptional regulator lspA 1799610 - 1799119 - | lipoprotein signal peptidase TERM 1021 1799282 - 1799261 - G 70 -5.1 -4.42788 | CGGAAGTCGAGAAAA TCAACGACG GAGC CATCGTAGA AGCGATCGAGACCAT Synpcc7942_1727 1800219 - 1799638 - | BioY protein TERM 1022 1799829 - 1799815 - G 77 -2.8 -5.04385 | overlap 1799817 GATAGCCCCAAAAAA CTGG ACCGTCG CCAG ACCCAGCAGGCAACC TERM 1023 1799947 - 1799929 - G 80 -5.2 -4.95957 | overlap 1799935 GAAACCAATCAAAAA GCCAAAGC CCG GCTCTTGC CAATAGCCGAGCCCG TERM 1024 1799959 - 1799935 - G 79 -10.7 -4.02315 | overlap 1799929 1799953 AATCAAAAAGCCAAA GCCCGGCTCTT GCC AATAGCCGAGC CCGCCACCTTGGCTA Synpcc7942_1728 1800372 - 1800887 + | hypothetical protein Synpcc7942_1729 1800893 - 1802005 + | potassium-transporting ATPase D chain Synpcc7942_1730 1802050 - 1802640 + | hypothetical protein Synpcc7942_1731 1803171 - 1802686 - | hypothetical protein Synpcc7942_1732 1803578 - 1803168 - | hypothetical protein Synpcc7942_1733 1804219 - 1803575 - | transcriptional regulator Synpcc7942_1734 1804395 - 1804757 + | ferredoxin-thioredoxin reductase catalytic chain Synpcc7942_1735 1804805 - 1806244 + | cysteine desulfurase activator complex subunit SufB Synpcc7942_1736 1806290 - 1807075 + | Iron-regulated ABC transporter ATPase subunit SufC Synpcc7942_1737 1807075 - 1808403 + | Iron-regulated ABC transporter permease protein SufD Synpcc7942_1738 1808413 - 1809672 + | cysteine desulfurase Synpcc7942_1739 1809717 - 1810142 + | MerR family transcriptional regulator Synpcc7942_1740 1811088 - 1810183 - | UDP-N-acetylmuramate dehydrogenase murC 1812535 - 1811099 - | UDP-N-acetylmuramate--L-alanine ligase Synpcc7942_1742 1812814 - 1813833 + | glyceraldehyde-3-phosphate dehydrogenase TERM 1025 1813871 - 1813889 + F 100 -11.7 -5.24129 | opp_overlap 1813871 TTTCTAGTCAAGATA GCCTCCC ATAAC GGGAGGC TTTTTTGTGGCCAAG TERM 1026 1813889 - 1813871 - f 79 -12.4 -3.10344 | opp_overlap 1813871 TTTCTAGTCAAGATA GCCTCCCA TAA CGGGAGGC TTTTTTGTGGCCAAG TERM 1027 1815047 - 1815037 - g 86 -6.8 -5.15634 | TACGTCAGCAAAAAA GTCG CGC CGAC CTTCAAGATTCCAGC Synpcc7942_1743 1814092 - 1815276 + | NAD(P)H-quinone oxidoreductase subunit H TERM 1028 1815336 - 1815355 + F 85 -10 -4.2528 | opp_overlap 1815339 CAGAGCGGGTTAGGA CAAGGGGC TTAA GCCTCTTG TTTCTTCCCTTGAGC Synpcc7942_1744 1815423 - 1815833 + | hypothetical protein Synpcc7942_1745 1816393 - 1815848 - | hypothetical protein TERM 1029 1816534 - 1816511 - R 100 -11 -4.64861 | CTCCCCCAAAACAAA GCCCGAGG GGAGTGAA CCTCGGGC AGTCAGAGTCTTGAT Synpcc7942_1746 1817562 - 1816600 - | group2 RNA polymerase sigma factor SigB TERM 1030 1817212 - 1817232 + g 71 -11.3 -3.12847 | CAGCCCCAGTGTGCC TTCTTGGAT GAG ATCCAAGAA TTCCATGTGACGCTT Synpcc7942_1747 1818962 - 1817778 - | hypothetical protein Synpcc7942_1748 1819751 - 1818990 - | hypothetical protein Synpcc7942_1749 1820146 - 1819754 - | ferredoxin Synpcc7942_1750 1820532 - 1820146 - | hypothetical protein Synpcc7942_1751 1820778 - 1820575 - | hypothetical protein Synpcc7942_1752 1821770 - 1821018 - | hypothetical protein Synpcc7942_1753 1822354 - 1821890 - | hypothetical protein Synpcc7942_1754 1822497 - 1822345 - | hypothetical protein Synpcc7942_1755 1824227 - 1822494 - | hypothetical protein TERM 1031 1823924 - 1823902 - G 75 -6.2 -4.66938 | ACGGCGAACAGAAAA GCTTTGATGC CGC GCAACCAAGC AGCTGTCTGACCGCC Synpcc7942_1756 1824511 - 1824236 - | hypothetical protein Synpcc7942_1757 1824648 - 1824935 + | hypothetical protein TERM 1032 1824975 - 1825009 + T 100 -13 -4.65895 | opp_overlap 1824965 1824968, overlap 1824978 ACAATTCAGATCCCC TGAGAGCGATCGCT TCAACCC AGCGATCGCTCTTG TTTTTGGCTGGCAGC TERM 1033 1824978 - 1825006 + T 100 -14.7 -4.44608 | opp_overlap 1824968, overlap 1824975 ATTCAGATCCCCTGA GAGCGATCGCT TCAACCC AGCGATCGCTC TTGTTTTTGGCTGGC Synpcc7942_1758 1826267 - 1825182 - | hypothetical protein Synpcc7942_1759 1826452 - 1826249 - | CAB/ELIP/HLIP-related protein TERM 1034 1826479 - 1826465 - H 82 -9.2 -4.1552 | CATTCTGTCAACAAA CGGGGA TGA CCCCCG CGATCCCTGGAATCT Synpcc7942_1760 1826528 - 1827619 + | L-alanine dehydrogenase TERM 1035 1828793 - 1828768 - g 72 -3.9 -4.78753 | overlap 1828759 1828770 1828792 CCAAGACCAACAAAA CTTGGTTGACA GCAT CGGCAACCAGG ACAAAGCCCGCCGCG TERM 1036 1828855 - 1828840 - g 71 -7.6 -4.08692 | CAACCTGCCGCAAAA CGTCAA TGTT TTGACG GCGGACCCCGTGGAG Synpcc7942_1761 1827800 - 1829530 + | hypothetical protein TERM 1037 1829538 - 1829554 + F 70 -10.1 -3.23538 | overlap 1829536 GGGGCTGATGCCTGC CTCAGCC TTA GGCTGGG TTGATAGTGCATTGT Synpcc7942_1762 1829577 - 1831028 + | hypothetical protein Synpcc7942_1763 1831028 - 1831846 + | inositol monophosphate family protein Synpcc7942_1764 1831862 - 1832230 + | hypothetical protein Synpcc7942_1765 1832806 - 1832303 - | hypothetical protein Synpcc7942_1766 1834029 - 1832998 - | cytochrome d ubiquinol oxidase, subunit II Synpcc7942_1767 1835490 - 1834078 - | cytochrome oxidase d subunit I TERM 1038 1835420 - 1835406 - G 71 -4.2 -4.652 | AAAGCATGTGAAAAA TTGCGG TGA CAGCAA ATTGCAGGCGGGAGA Synpcc7942_1768 1835596 - 1836408 + | hypothetical protein TERM 1039 1836544 - 1836560 + G 72 -2.1 -4.86773 | overlap 1836546 1836555 TAGAGAGCGATCGCA CCCTGAC TGA GGCAGAG TTTTTGCTGCTTTTA Synpcc7942_1769 1836408 - 1836794 + | hypothetical protein Synpcc7942_1770 1837047 - 1836751 - | hypothetical protein TERM 1040 1836823 - 1836812 - G 83 -3.6 -5.27477 | ACCCCAAGCAAAAAA GCGA GCTC CCGC ACCTGAGGATTGAGC Synpcc7942_1771 1837162 - 1838652 + | signal recognition particle subunit FFH/SRP54 (srp54) rpsP 1838756 - 1839004 + | 30S ribosomal protein S16 Synpcc7942_1773 1839008 - 1839325 + | hypothetical protein TERM 1041 1839465 - 1839452 - g 72 -2.3 -4.89477 | opp_overlap 1839452, overlap 1839453 GTTTCAAGAAGAAAA TCCAG AAAG CTGGC ATTCTTCCCGAAGTC rpsU 1839385 - 1839558 + | 30S ribosomal protein S21 TERM 1042 1839669 - 1839700 + F 95 -5.8 -5.40474 | overlap 1839671 GATCGCCCATTGTCT GAGAGGTGGGCTCT GAAT GGAGTCAACCTCTA TTTTTTTACCGAGCT TERM 1043 1839671 - 1839698 + F 81 -8.4 -4.34482 | overlap 1839669 TCGCCCATTGTCTGA GAGGTGGGCTCT GAAT GGAGTCAACCTC TATTTTTTTACCGAG Synpcc7942_1775 1839685 - 1840650 + | phosphate starvation-induced protein Synpcc7942_1776 1840742 - 1840999 + | hypothetical protein Synpcc7942_1777 1841045 - 1841998 + | hypothetical protein Synpcc7942_1778 1843869 - 1842010 - | hypothetical protein Synpcc7942_1779 1843941 - 1845686 + | DNA repair protein RecN mutL 1845760 - 1847385 + | DNA mismatch repair protein TERM 1044 1847424 - 1847409 - T 100 -10.4 -4.86385 | opp_overlap 1847409 1847408 1847406 ACCCGCAAAAAGAAA GGGGCT TAAA AGCCCC CTCTTGTTATTCAAA Synpcc7942_1781 1847743 - 1847468 - | hypothetical protein TERM 1045 1847800 - 1847781 - R 85 -11.4 -3.68619 | opp_overlap 1847780 GGGAACTCAGCGAAA CGGCAGCC TCAC AGCTGCCG CTCATTTGTATCAGT Synpcc7942_1782 1849121 - 1847829 - | threonine synthase TERM 1046 1848193 - 1848224 + g 76 -6.5 -4.56775 | overlap 1848198 CCGTCAGCAGGGTTG CCGATCGCGATCG ATTTAG CGATCGTGTTGGG TTTTTCAGGGGCGAT TERM 1047 1849193 - 1849213 + H 81 -9.8 -3.87815 | opp_overlap 1849193 ATTTTGCTTCAAAAA CACAGACT AAAAC AGTCTGTG TTTGTCGAGATGGGG TERM 1048 1849213 - 1849193 - H 95 -10.5 -4.56775 | opp_overlap 1849193 ATTTTGCTTCAAAAA CACAGACTA AAA CAGTCTGTG TTTGTCGAGATGGGG TERM 1049 1851067 - 1851081 + G 73 -5.6 -4.5464 | opp_overlap 1851066, overlap 1851069 ACACTGGGCAACTAT GCGCAG CGA CTGCTC TTTTCCTTGTATCTA Synpcc7942_1783 1849303 - 1852170 + | hypothetical protein Synpcc7942_1784 1852529 - 1853311 + | RNA polymerase sigma factor SigF Synpcc7942_1785 1853718 - 1853308 - | hypothetical protein Synpcc7942_1786 1854250 - 1853723 - | hypothetical protein Synpcc7942_1787 1854729 - 1854247 - | SUF system FeS assembly protein TERM 1050 1854655 - 1854670 + g 78 -4.6 -4.93296 | overlap 1854656 AATCGGATCGGTCGT CCCTCG GTGG CGAGGC TTTTTGTAATGCTCC TERM 1051 1855450 - 1855472 + G 72 -4 -4.78572 | CTAGGGCAATCGCAG CTTGGTACTG TCT CAGGCCCGAG TTTTGTTAGTTGGCA Synpcc7942_1788 1855204 - 1859910 + | hypothetical protein TERM 1052 1860122 - 1860110 - g 81 -3.4 -5.23316 | GATGAGATCAAAAAA GCTT TCCGT AAGC TGGCTCGCCAGTACC Synpcc7942_1789 1860032 - 1861012 + | heat shock protein DnaJ-like Synpcc7942_1790 1861019 - 1861810 + | DNA adenine methylase Synpcc7942_1791 1863066 - 1861831 - | hypothetical protein Synpcc7942_1792 1863290 - 1864270 + | delta-aminolevulinic acid dehydratase Synpcc7942_1793 1864440 - 1864763 + | thioredoxin TERM 1053 1865215 - 1865226 + G 79 -7.2 -4.58283 | CGCCTCCCGACGACG GCCG ATCG CGGC TTTTTGCCAGACTTC TERM 1054 1865420 - 1865434 + G 73 -8.6 -4.10161 | overlap 1865417 TCGGTTTTGATGGGG TTGAGG TAC CCTCAA TTTTCCAAGCTGATC Synpcc7942_1794 1864768 - 1865946 + | succinyldiaminopimelate transaminase smpB 1866443 - 1865979 - | SsrA-binding protein Synpcc7942_1796 1866749 - 1866456 - | hypothetical protein Synpcc7942_1797 1866873 - 1867376 + | hypothetical protein TERM 1055 1867593 - 1867612 + F 70 -5 -4.57569 | opp_overlap 1867607, overlap 1867581 TCCCCTGTTTCATCG TCAGCC ATAAAACG GGCTGA TTTTTCAACCACTAA Synpcc7942_1798 1867864 - 1868490 + | hypothetical protein TERM 1056 1869024 - 1869048 + GF 75 -5.8 -4.56597 | CGCCAAATGAATCAG CTGATTGAGA CAGTT TTTCGATCAG TTTTTGAGACAGAGC Synpcc7942_1799 1868940 - 1869971 + | hydrogenase expression/formation protein HypE Synpcc7942_1800 1869943 - 1870455 + | hypothetical protein TERM 1057 1870528 - 1870547 + F 86 -9.2 -4.30719 | opp_overlap 1870528 GTCTGTGCGTGGAAA GCCGGTGC GATC GTGCCGGC TTTATTGTGAACAGC Synpcc7942_1801 1870692 - 1871408 + | hypothetical protein Synpcc7942_1802 1873145 - 1871523 - | response regulator receiver domain-containing protein Synpcc7942_1803 1873782 - 1873351 - | ferric uptake regulator family protein Synpcc7942_1804 1874397 - 1873843 - | hypothetical protein Synpcc7942_1805 1875253 - 1874474 - | HetI protein-like Synpcc7942_1806 1875268 - 1875741 + | bacterioferritin comigratory protein Synpcc7942_1807 1875797 - 1876243 + | mutator MutT-like Synpcc7942_1808 1876959 - 1876216 - | pantothenate kinase Synpcc7942_1809 1877025 - 1878740 + | flavoprotein Synpcc7942_1810 1878956 - 1880710 + | flavoprotein TERM 1058 1881236 - 1881261 + G 74 -7.5 -4.19746 | overlap 1881237 ACCCAAAACATCCTA GGTCTACCCCA TCCA TGGGGAAGACG TTCTTTTCAGCTCAC TERM 1059 1881237 - 1881260 + G 71 -11 -3.11366 | overlap 1881236 CCCAAAACATCCTAG GTCTACCCCA TCCA TGGGGAAGAC GTTCTTTTCAGCTCA TERM 1060 1883785 - 1883801 + G 72 -3.7 -4.7373 | TATTTGCCAACAAAA TATTCGC GAA GTGGATA TTTTTGCTCGGCTGG Synpcc7942_1811 1880981 - 1884094 + | diguanylate cyclase Synpcc7942_1812 1884374 - 1884096 - | hypothetical protein Synpcc7942_1813 1886350 - 1884434 - | heat shock protein 90 TERM 1061 1885081 - 1885093 + g 83 -7.7 -4.81083 | opp_overlap 1885081 1885079 1885077 CCGTACAGTAATAGA CACGA TTT TCGTG TTTTTCCTGGTTGCG Synpcc7942_1814 1887205 - 1886477 - | cyclic nucleotide-binding domain-containing protein TERM 1062 1887058 - 1887040 - G 72 -3.8 -4.83615 | CATCGGCGACAAAAA CGCCCA CCCGTCC TGAGCG AATCCAGTAGAGCGC Synpcc7942_1815 1888451 - 1887216 - | response regulator receiver domain-containing protein Synpcc7942_1816 1891377 - 1888444 - | periplasmic sensor hybrid histidine kinase Synpcc7942_1817 1891788 - 1891423 - | response regulator receiver domain-containing protein Synpcc7942_1818 1892208 - 1891891 - | hypothetical protein TERM 1063 1891961 - 1891973 + g 74 -7.7 -4.20918 | opp_overlap 1891961 1891957 TTGAGTAATAACTCA GACAG CCA CTGTC TTTGTTCAGGTTCGA TERM 1064 1892249 - 1892239 - H 78 -5.4 -4.8622 | CGCGTCAAGCAAAAA TTGG GTC CCAA GTCAGCGATGCCTCA Synpcc7942_1819 1892346 - 1892930 + | hypothetical protein TERM 1065 1892963 - 1892937 - T 100 -12.3 -4.90525 | GAACCCTAAACAAAA CGGCCAAGCCC TCACT GGACTTGACCG TCATGCAGATTATTT Synpcc7942_1820 1893735 - 1893007 - | hypothetical protein TERM 1066 1893826 - 1893839 + H 100 -9.5 -5.22794 | overlap 1893817 1893816 GACGATCGCGCGCAG GGCGG TTTT CCGCC TTTTTTCGTCGTTAT Synpcc7942_1821 1893904 - 1894263 + | hypothetical protein TERM 1067 1894446 - 1894433 - g 76 -5.2 -4.68593 | GGGATGACCTAAAAA CCCG TTTGGC CGGG ATCAACGCTGCGATC Synpcc7942_1822 1894291 - 1894503 + | hypothetical protein Synpcc7942_1823 1895159 - 1894500 - | HEAT repeat-containing PBS lyase TERM 1068 1894528 - 1894547 + g 100 -15 -4.1891 | CCATCGCCCCTGGCA GCGGCAGC TACA GCTGCCGC TTTGTCTTGCGAAAG Synpcc7942_1824 1895630 - 1895166 - | CBS TERM 1069 1895288 - 1895274 - G 77 -11.4 -3.57144 | overlap 1895277 CTTTCGATCGTTAAA GAGGCG AGC CGCCTC CGGCAGCGGGCGATC TERM 1070 1895665 - 1895679 + H 74 -10 -3.51411 | overlap 1895661 CTCTAATTTTAGGGA TCGCGA TCG TCGCGA TTAATTTACCGGGGT Synpcc7942_1825 1895707 - 1896225 + | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase Synpcc7942_1826 1897163 - 1896222 - | mRNA-binding protein TERM 1071 1896359 - 1896349 - G 74 -4.6 -4.68593 | overlap 1896350 TCGATCAGTGAAAAA CGGG GCA CCCA CTCGAGATCTTGCCG Synpcc7942_1827 1897287 - 1897913 + | hypothetical protein Synpcc7942_1828 1897914 - 1898171 + | hypothetical protein Synpcc7942_1829 1898205 - 1898975 + | 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase TERM 1072 1899076 - 1899090 + T 100 -10 -5.45652 | opp_overlap 1899075 GCAGAAGCACTACAC CCCCAA TTT TTGGGG TTTTTTGTTAGGAAT TERM 1073 1899186 - 1899162 - T 100 -13.6 -4.614 | CTCAAGCACACAAAA GCGCCCTGAG GAAAA CTCAAGGCGC TGACATGAAGAAGAC TERM 1074 1899235 - 1899223 - T 84 -4.1 -5.24551 | opp_overlap 1899212 1899223, overlap 1899213 TTAAAGCAAGAAAAA CATCC TAG AGATG TTTATCTAGCGTGTT Synpcc7942_1830 1899550 - 1899227 - | thioredoxin TERM 1075 1899710 - 1899690 - R 100 -16.1 -5.26316 | opp_overlap 1899687 CGATCGCATAAAAAA CGCCCGAGC GTT GCCCGGGCG AAGTGTGGTGTGAGG TERM 1076 1899815 - 1899849 + r 70 -6.5 -4.27211 | gap 1, overlap 1899819 GCCGCAGCGGTTTCT TCATACCCACATGAGC GATC GCTCATGTAGGC-TGA TTTGCTTTATTTGCC Synpcc7942_1831 1901019 - 1899856 - | inositol-5-monophosphate dehydrogenase TERM 1077 1900735 - 1900717 - G 77 -9.6 -3.93236 | CATCAAGGGCACAAA CTCAGTTG GAC CAACCGAG GCAATACGATCGAGG TERM 1078 1901127 - 1901110 - R 100 -12.7 -4.82901 | CCGCTGCTACAAAAA GGGGGCT GGTT AGCCCCC CAGACAGCGATGACG Synpcc7942_1832 1901601 - 1901152 - | hypothetical protein Synpcc7942_1833 1901772 - 1902530 + | hypothetical protein Synpcc7942_1834 1902530 - 1902988 + | hypothetical protein Synpcc7942_1835 1903031 - 1903657 + | hypothetical protein Synpcc7942_1836 1903990 - 1903658 - | hypothetical protein Synpcc7942_1837 1904374 - 1904030 - | hypothetical protein Synpcc7942_1838 1905957 - 1904431 - | light-independent protochlorophyllide reductase subunit B Synpcc7942_1839 1906834 - 1906094 - | hypothetical protein TERM 1079 1906896 - 1906866 - R 88 -11.2 -4.14576 | opp_overlap 1906866, overlap 1906893 CCAAAAAGAGAACAA GCGATCGCCCCT TTAGTCC AGAAGCGATCGC TGAGTTGAGTCATCG Synpcc7942_1840 1907426 - 1906920 - | hypothetical protein Synpcc7942_1841 1908845 - 1907478 - | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase TERM 1080 1909555 - 1909565 + G 73 -5.4 -4.56597 | ATGGCGCTGAGGTTG CTTG TCC CAAG TTTTTCCGCAAGGGA Synpcc7942_1842 1908945 - 1910213 + | transposase IS605 Synpcc7942_1843 1911034 - 1910225 - | hypothetical protein Synpcc7942_1844 1911558 - 1911034 - | 7-cyano-7-deazaguanine reductase Synpcc7942_1845 1911652 - 1911879 + | hypothetical protein TERM 1081 1911929 - 1911947 + T 100 -16 -3.59979 | opp_overlap 1911929 CCCTCAACAGAAAAA GCCCCTGC AAT GCAGGGGC TTTGACGTAAAGAGC TERM 1082 1911947 - 1911929 - T 100 -16 -5.0916 | opp_overlap 1911929 CCCTCAACAGAAAAA GCCCCTGC AAT GCAGGGGC TTTGACGTAAAGAGC Synpcc7942_1846 1913807 - 1911978 - | hypothetical protein Synpcc7942_1847 1914755 - 1913856 - | dihydrodipicolinate synthase Synpcc7942_1848 1915836 - 1914772 - | aspartate-semialdehyde dehydrogenase TERM 1083 1917660 - 1917676 + G 71 -6.5 -4.2123 | TCGGATGCGGTTTGG TCTGCGC GAT GGGCAGA TTTATTCCCTCGCTG Synpcc7942_1849 1916620 - 1917816 + | RNA polymerase sigma factor SigC TERM 1084 1917852 - 1917877 + T 100 -15.5 -5.42259 | opp_overlap 1917854 CCTGTCTGTCTTAAG CAGCTTAGGCG CGAT CGCCTAGGCTG TTTTTTTGACCGTCC Synpcc7942_1850 1919099 - 1917870 - | precorrin-6Y C5,15-methyltransferase (decarboxylating) TERM 1085 1920671 - 1920688 + G 74 -7.7 -4.2717 | opp_overlap 1920670, overlap 1920683 TCGCTTTGATCGAAT CTCAGGT CCCA GCCTGAG TTTTCATCAGGTCAT Synpcc7942_1851 1919364 - 1920827 + | ferredoxin--nitrite reductase cobH 1920852 - 1921481 + | precorrin-8X methylmutase Synpcc7942_1853 1921478 - 1922182 + | cobalt-factor II C20-methyltransferase / precorrin-2 C20-methyltransferase TERM 1086 1923093 - 1923066 - g 75 -9.2 -4.16681 | AATACTAGCTGAAAA TTCCACAATCGC TATT GCGATCGCAGAA GAACCAATCCAACCC Synpcc7942_1854 1922179 - 1923879 + | precorrin-3 methyltransferase Synpcc7942_1855 1923883 - 1925253 + | cobyrinic acid a,c-diamide synthase Synpcc7942_1856 1925324 - 1925830 + | tRNA-adenosine deaminase Synpcc7942_1857 1926701 - 1925835 - | 3-hydroxyacid dehydrogenase TERM 1087 1925880 - 1925906 + g 79 -7.2 -4.58395 | opp_overlap 1925879, overlap 1925881 1925882 GAGGGCTGAATAATC TTGATCGCCCCA ACC TTGGGCGATCGC TTTTTGGACAATGGA TERM 1088 1925881 - 1925905 + g 70 -10.7 -3.34716 | opp_overlap 1925879, overlap 1925880 1925882 AGGGCTGAATAATCT TGATCGCCCCA ACC TTGGGCGATCG CTTTTTGGACAATGG TERM 1089 1925882 - 1925904 + g 70 -12 -2.60508 | opp_overlap 1925879, overlap 1925881 1925880 GGGCTGAATAATCTT GATCGCCCCA ACC TTGGGCGATC GCTTTTTGGACAATG Synpcc7942_1858 1926893 - 1927609 + | Heme oxygenase (decyclizing) TERM 1090 1927634 - 1927657 + F 100 -13.2 -4.62783 | TACTTGAGCTTGAGA GCCCGGAGAT TAGA ATCTCTGGGC TTTTTAGACTGACTC Synpcc7942_1859 1927733 - 1930486 + | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) Synpcc7942_1860 1931182 - 1930475 - | two component LuxR family transcriptional regulator Synpcc7942_1861 1932605 - 1931340 - | periplasmic binding protein of ABC transporter for natural amino acids TERM 1091 1932941 - 1932921 - g 85 -12.7 -3.73775 | overlap 1932924 GTCATCCTGACCAAA GAACAACAG CCC CTGTTGTTC ACGTCTCGGGACAAG TERM 1092 1932938 - 1932924 - g 71 -8.6 -4.0031 | overlap 1932921 ATCCTGACCAAAGAA CAACAG CCC CTGTTG TTCACGTCTCGGGAC Synpcc7942_1862 1932765 - 1933688 + | hypothetical protein Synpcc7942_1863 1933701 - 1934582 + | HemK family modification methylase Synpcc7942_1864 1934588 - 1935175 + | hypothetical protein TERM 1093 1935522 - 1935505 - g 73 -9.1 -3.87075 | overlap 1935491 ATCATCGCCTACAAA GCCGGTG ATCC CACCAGC AAAGCGGCTGCAGAT TERM 1094 1935736 - 1935753 + G 76 -6.9 -4.56597 | CTGTTGACCTTCAAC GTCGGGG GACA CCTCGGC TTTTTGACGCAGCCC ppnK 1935472 - 1936392 + | inorganic polyphosphate/ATP-NAD kinase Synpcc7942_1866 1936799 - 1936389 - | hypothetical protein TERM 1095 1937359 - 1937343 - g 74 -6.5 -4.38712 | overlap 1937344 1937345 GTGAGCCCTACAAAA CCGGCTG GGA CAGCCAA CAATACAGCGAGGCG Synpcc7942_1867 1936937 - 1937818 + | deoxyribodipyrimidine photo-lyase family protein Synpcc7942_1868 1937822 - 1938253 + | hypothetical protein Synpcc7942_1869 1941534 - 1938280 - | cation efflux system protein Synpcc7942_1870 1942814 - 1941531 - | secretion protein HlyD TERM 1096 1941890 - 1941931 + g 74 -10.2 -3.55444 | gap 1, opp_overlap 1941890 TAATTTCCACAGGAA TCAGCCGGGTT-CGGCGAT CAGCT ACCGGCGCAATCCGGCTGA TTTGCCCCGTAAAGG TERM 1097 1941931 - 1941890 - G 70 -10.2 -3.26947 | gap 1, opp_overlap 1941890 TAATTTCCACAGGAA TCAGCCGGGTT-CGGCGAT CAGCT ACCGGCGCAATCCGGCTGA TTTGCCCCGTAAAGG Synpcc7942_1871 1943308 - 1943841 + | hypothetical protein TERM 1098 1943850 - 1943890 + F 77 -9.8 -3.63589 | opp_overlap 1943837 1943845 AAGATAGAAGTTCTA GCGAGCAGTTCAGCATTT GACTA AAATCATGTACTGCTCGC TTTAGAAATGTTTTA TERM 1099 1944504 - 1944518 + G 70 -2.8 -4.77896 | opp_overlap 1944497, overlap 1944495 1944505 GTCAACTACAGCTAG GCAGTA TTT TACTGG TTTTTACCTTGATTG Synpcc7942_1872 1943951 - 1945399 + | histidine kinase Synpcc7942_1873 1945396 - 1946076 + | two component transcriptional regulator Synpcc7942_1874 1946624 - 1946154 - | RNA methyltransferase TrmH, group 2 Synpcc7942_1875 1948101 - 1946701 - | hypothetical protein TERM 1100 1947706 - 1947744 + g 75 -12.5 -3.14564 | GCGCAAAATCTCGGT GTAGTGCTGGCAGAG CGCCTTCTT CTCTGCCAGCGCCAC TTGGTCCGGCGATCG Synpcc7942_1876 1948583 - 1948203 - | hypothetical protein Synpcc7942_1877 1950663 - 1948660 - | transglutaminase-like TERM 1101 1950586 - 1950557 - G 70 -5.1 -4.38712 | gap 2 GTGATCGCGACAAAA GCAGCTACGGGCG GCAGAT CGC-C-TAGCTGC AGCAGTAGGGCAATC Synpcc7942_1878 1951652 - 1950660 - | hypothetical protein TERM 1102 1951470 - 1951457 - G 76 -5.3 -4.71828 | opp_overlap 1951457 1951467, overlap 1951452 AGCTCAGCAACAAAA CCAAA TTGT TTTGG TAGTTGGTGCCAATT Synpcc7942_1879 1952587 - 1951649 - | MoxR protein-like TERM 1103 1952300 - 1952281 - G 71 -4.2 -4.57837 | ACACCTGGCTAAAAA TCGGTCCC GGAT GGAAGCGA AAGCGTTGTTCTTGC Synpcc7942_1880 1952819 - 1953025 + | hypothetical protein Synpcc7942_1881 1954726 - 1953074 - | L-aspartate oxidase TERM 1104 1953433 - 1953449 + g 75 -5.8 -4.57569 | TCCAGACCAAATCCT GCAGCG CTTGT CGTTGC TTTTTCCAGCGATCG TERM 1105 1953996 - 1953986 - G 74 -4.6 -4.7497 | TTCACTGATCAAAAA GCGC GGT GCAC CCGGCCAAACCAGTG TERM 1106 1954791 - 1954764 - R 100 -13.4 -4.57474 | overlap 1954753 TCAAGCTACAGAAAA GCCCGCAGCGAC TTCG ACCGCTGCGAGC TTACAAACCCAGGGA Synpcc7942_1882 1955224 - 1954814 - | photosystem II complex extrinsic protein precursor U Synpcc7942_1883 1956126 - 1955407 - | hypothetical protein TERM 1107 1955972 - 1955959 - G 77 -9.5 -3.93288 | opp_overlap 1955957 1955970, overlap 1955938 CGCGACCCAATCAAA GCCGC GATC GCGGC AATCTTGCAGATAGT Synpcc7942_1884 1956647 - 1956126 - | bifunctional ADP-heptose synthase TERM 1108 1956588 - 1956611 + g 74 -13.2 -2.75481 | gap 1 CACCAGCGGTCGCCA GCGATCG-GGC TCC GCCGCGATCGC TGCTTGCAGTTCCGC Synpcc7942_1885 1957411 - 1956644 - | HAD family hydrolase Synpcc7942_1886 1957417 - 1959471 + | exonuclease RecJ Synpcc7942_1887 1959524 - 1960816 + | mannosyltransferase TERM 1109 1960896 - 1960877 - g 77 -2.8 -5.10461 | CCGACTCAAGAAAAA GATCAAGA AAAT TCGCGATC GCTTATTCCGAACTC Synpcc7942_1888 1960851 - 1961891 + | hypothetical protein TERM 1110 1961918 - 1961895 - T 87 -14 -3.12749 | opp_overlap 1961895 1961898, overlap 1961898 CCAAGAACCTGAATA TAACGCTTGC TTAA GCAAGCGTTA TTGTATTGCCTGTCG TERM 1111 1961895 - 1961918 + T 100 -14 -3.70446 | opp_overlap 1961895 1961898, overlap 1961898 CCAAGAACCTGAATA TAACGCTTGC TTAA GCAAGCGTTA TTGTATTGCCTGTCG TERM 1112 1961898 - 1961915 + T 90 -11.3 -3.97511 | opp_overlap 1961898 1961895, overlap 1961895 AGAACCTGAATATAA CGCTTGC TTAA GCAAGCG TTATTGTATTGCCTG TERM 1113 1961915 - 1961898 - T 85 -11.3 -3.6947 | opp_overlap 1961895 1961898, overlap 1961895 AGAACCTGAATATAA CGCTTGC TTAA GCAAGCG TTATTGTATTGCCTG TERM 1114 1961930 - 1961948 + T 86 -11 -3.97709 | GTTATTGTATTGCCT GTCGGCTC ACT GAGCTGAC TTATTCTTACCTAGT Synpcc7942_1889 1963582 - 1961987 - | hypothetical protein TERM 1115 1962992 - 1962965 - G 70 -9.8 -3.48292 | opp_overlap 1962965, overlap 1962963 ATCCATGATGAAATA GCGGAGACCAGC ATCC GCTAGCATCCGC TCTACTCCTTCGTAG TERM 1116 1964148 - 1964172 + G 70 -2.8 -4.72272 | gap 1, overlap 1964144 1964134 GGATGATAGTTCTCG CCG-CGATCGC GGGA GTTATCGTCGG TTTTTGGTACACCAG Synpcc7942_1890 1963748 - 1964254 + | hypothetical protein Synpcc7942_1891 1964412 - 1964972 + | hypothetical protein Synpcc7942_1892 1964969 - 1965778 + | rhodanese-like protein Synpcc7942_1893 1966530 - 1965754 - | ATPase Synpcc7942_1894 1967599 - 1966520 - | integral membrane protein of the ABC-type Nat permease for neutral amino acids Synpcc7942_1895 1967770 - 1968582 + | hypothetical protein TERM 1117 1968591 - 1968619 + T 81 -6.7 -4.65933 | opp_overlap 1968594, overlap 1968594 GCCCTAATTTACTCA AAAGGTCTTCAAG ACA CCTGAAGGCCTTC TTTGTTTTGACGATC TERM 1118 1968594 - 1968616 + T 81 -8.4 -4.43397 | opp_overlap 1968594, overlap 1968591 CTAATTTACTCAAAA GGTCTTCAAG ACA CCTGAAGGCC TTCTTTGTTTTGACG TERM 1119 1968616 - 1968594 - T 78 -8.4 -4.21275 | opp_overlap 1968594 1968591 CTAATTTACTCAAAA GGTCTTCAAG ACA CCTGAAGGCC TTCTTTGTTTTGACG argJ 1969898 - 1968654 - | bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein Synpcc7942_1897 1970821 - 1969931 - | putative transcripton factor DevT-like Synpcc7942_1898 1972228 - 1970822 - | isopropylmalate isomerase large subunit TERM 1120 1971053 - 1971073 + g 75 -11.1 -3.45571 | CGCCGTAAAGATTTG GTCGAGGCC TTC GGCTTCGGC TTGCTGTTTGACGCG Synpcc7942_1899 1972778 - 1972290 - | hypothetical protein dcd 1972832 - 1973413 + | deoxycytidine triphosphate deaminase Synpcc7942_1901 1975839 - 1973458 - | putative glycosyltransferase TERM 1121 1975457 - 1975443 - G 74 -2.8 -4.84914 | ATTCAGAGAATAAAA GCTC TAGCTGG GAGC GATCGCCATTTTTTT Synpcc7942_1902 1976978 - 1975932 - | putative glycosyltransferase Synpcc7942_1903 1978113 - 1976983 - | hypothetical protein Synpcc7942_1904 1979454 - 1978129 - | hemolysin secretion protein-like Synpcc7942_1905 1982498 - 1979496 - | cyclic nucleotide-binding domain-containing protein Synpcc7942_1906 1983253 - 1982513 - | hypothetical protein TERM 1122 1983389 - 1983365 - R 88 -10.7 -4.10958 | opp_overlap 1983365, overlap 1983358 TCAGAAAATAGTAAA GCAGGGTAACT GAT AGCGACCCTGC TTTGGTGGAATCTAA TERM 1123 1983365 - 1983389 + r 72 -8.5 -3.75665 | opp_overlap 1983365 1983358 TCAGAAAATAGTAAA GCAGGGTAACT GAT AGCGACCCTGC TTTGGTGGAATCTAA Synpcc7942_1907 1984493 - 1983417 - | magnesium-protoporphyrin IX monomethyl ester cyclase TERM 1124 1984447 - 1984472 + g 73 -5.3 -4.57073 | GCAGGAGCCTTAATG CCCGGACGCAA TTCT TCGAGTTCGGG TTTTTGGAGGGAATC Synpcc7942_1908 1985081 - 1984647 - | hypothetical protein TERM 1125 1984795 - 1984785 - G 74 -6.8 -4.4078 | GTCGGCTAAGGAAAA CACC TTG GGTG CAGTTAGGCTTTCTT Synpcc7942_1909 1985738 - 1985142 - | hypothetical protein Synpcc7942_1910 1986379 - 1985741 - | aromatic acid decarboxylase Synpcc7942_1911 1988613 - 1986376 - | cold shock protein TERM 1126 1986691 - 1986703 + g 70 -10.5 -3.30159 | opp_overlap 1986685, overlap 1986697 ACCAATGCAGGCCTT GGCGG CGG CCGCC TTCTGGAGCCCTTGG Synpcc7942_1912 1989605 - 1988931 - | phosphate uptake regulator, PhoU psaM 1989729 - 1989818 + | photosystem I reaction center subunit XII TERM 1127 1989861 - 1989888 + F 76 -4.2 -4.98531 | TACAATCACGACTGA CTCTCTGG GAACCTCGGCGA CCAGAGAG TTTTTGATTTAGGGC Synpcc7942_1913 1989975 - 1990358 + | hypothetical protein Synpcc7942_1914 1990394 - 1990852 + | hypothetical protein Synpcc7942_1915 1991412 - 1991020 - | chorismate mutase Synpcc7942_1916 1992281 - 1991469 - | signal peptide peptidase A TERM 1128 1993186 - 1993199 + G 93 -2.3 -5.72207 | TCTTCGGCAGTGCGA TCGCC TACG GGCTA TTTTTTTACTTTGCC Synpcc7942_1917 1992369 - 1993463 + | permease of the drug/metabolite transporter Synpcc7942_1918 1993521 - 1994600 + | UDP-glucose:tetrahydrobiopterin glucosyltransferase Synpcc7942_1919 1995326 - 1994565 - | XRE family transcriptional regulator leuS 1998193 - 1995596 - | leucyl-tRNA synthetase Synpcc7942_1921 1998203 - 1998655 + | hypothetical protein Synpcc7942_1922 1999156 - 1998656 - | putative transmembrane transcriptional regulator Synpcc7942_1923 1999896 - 1999240 - | RNA polymerase sigma factor RpoE TERM 1129 1999753 - 1999785 + g 75 -6.1 -4.56597 | overlap 1999778 TTGGTAGCGCCGCAC CAGCTCCGTAAACGC AAG GCGATCGCTGGGCTG TTTTTGGCAGCGCAG Synpcc7942_1924 2000732 - 2000205 - | hypothetical protein Synpcc7942_1925 2001583 - 2000732 - | peptidase Synpcc7942_1926 2001940 - 2001647 - | hypothetical protein dapF 2001982 - 2002824 + | diaminopimelate epimerase Synpcc7942_1928 2002837 - 2003079 + | hypothetical protein TERM 1130 2004192 - 2004209 + G 71 -11.3 -3.06796 | GGTATTCGTTTCAGC CTGGGTC GATC GACCCAG TTGGCTGAGGTAGAA TERM 1131 2004255 - 2004225 - g 74 -11 -3.35679 | TTGGCTGAGGTAGAA GCGGCGGCGATCGC CCT GCGATCGGCGCTCC ACAGCTTGCCCCAAG Synpcc7942_1929 2003133 - 2004293 + | cysteine desulfurase Synpcc7942_1930 2004305 - 2005048 + | hypothetical protein Synpcc7942_1931 2005055 - 2005825 + | serine/threonine protein phosphatase Synpcc7942_1932 2006047 - 2006580 + | hypothetical protein Synpcc7942_1933 2006589 - 2007635 + | isopentenyl pyrophosphate isomerase TERM 1132 2008844 - 2008858 + G 70 -5.6 -4.39696 | TTTCTCACGGGGGCA GCGGGA CTC TCCGGC TTTATTGATTTACCG Synpcc7942_1934 2007641 - 2008990 + | D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase TERM 1133 2009112 - 2009129 + T 76 -4.1 -5.0133 | TTTAAAATGCAATTA CTGTTGT CGTG ACAGCGG TTTTTTAGCCAAATA Synpcc7942_1935 2010020 - 2009232 - | type 4 prepilin peptidase 1. Aspartic peptidase. MEROPS family A24A Synpcc7942_1936 2010268 - 2010026 - | hypothetical protein Synpcc7942_1937 2011127 - 2010387 - | peptide methionine sulfoxide reductase Synpcc7942_1938 2012275 - 2011214 - | multidrug-efflux transporter Synpcc7942_1939 2012363 - 2013364 + | glyceraldehyde-3-phosphate dehydrogenase Synpcc7942_1940 2013361 - 2014620 + | putative membrane transporter Synpcc7942_1941 2014681 - 2015577 + | hypothetical protein Synpcc7942_1942 2015645 - 2016097 + | bacterioferritin comigratory protein-like TERM 1134 2016138 - 2016115 - T 81 -10.2 -3.88698 | opp_overlap 2016114, overlap 2016113 2016116 GATCTACAGAAAAGA CCGCAGGGGG TTCA CCCCTTGCGA ATTCCTAGCGCACCA TERM 1135 2016137 - 2016116 - T 75 -11.5 -2.92496 | opp_overlap 2016114, overlap 2016115 2016113 ATCTACAGAAAAGAC CGCAGGGGG TTCA CCCCTTGCG AATTCCTAGCGCACC Synpcc7942_1943 2018038 - 2016143 - | cell division protein Ftn2-like TERM 1136 2017248 - 2017232 - G 79 -3.6 -5.1101 | overlap 2017233 2017234 GTAGCAGGCAAAAAA GCTCGC AGCCG GCGAGG GCCGACGCGCTTCCG TERM 1137 2017853 - 2017832 - G 100 -10.9 -5.00884 | gap 1, opp_overlap 2017832 ACCGCCCTGAAAAAA GCGGCGATCG TAG CGATCGC-GC TGTTCGGGATCACTC TERM 1138 2019054 - 2019034 - g 91 -6.7 -5.33866 | GAAATCTACAAAAAA GGCCCTGCC TTC GGCATGCCC GGCGTCGAAGTCGAC Synpcc7942_1944 2018389 - 2019417 + | pyruvate dehydrogenase (lipoamide) uvrC 2021429 - 2019498 - | excinuclease ABC subunit C Synpcc7942_1946 2021972 - 2021493 - | hypothetical protein Synpcc7942_1947 2023540 - 2022089 - | hypothetical protein Synpcc7942_1948 2023694 - 2023939 + | hypothetical protein Synpcc7942_1949 2024003 - 2024311 + | hypothetical protein Synpcc7942_1950 2024388 - 2024639 + | hypothetical protein Synpcc7942_1951 2024828 - 2025190 + | hypothetical protein Synpcc7942_1952 2025399 - 2025740 + | hypothetical protein Synpcc7942_1953 2026179 - 2025793 - | 6-pyruvoyl tetrahydrobiopterin synthase TERM 1139 2026034 - 2026007 - G 71 -7.6 -4.11484 | opp_overlap 2026008, overlap 2026008 CGTAATGTCCGAAAA TCCGCCACCATC ACTG GATGGGGGCAGT ATTCAGAGGGGCTGA TERM 1140 2026033 - 2026008 - G 71 -11.1 -3.06569 | opp_overlap 2026008, overlap 2026007 GTAATGTCCGAAAAT CCGCCACCATC ACTG GATGGGGGCAG TATTCAGAGGGGCTG Synpcc7942_1954 2027823 - 2026183 - | CTP synthetase Synpcc7942_1955 2027929 - 2028072 + | hypothetical protein Synpcc7942_1956 2028196 - 2029113 + | acetyl-CoA carboxylase subunit beta TERM 1141 2029162 - 2029185 + T 77 -12.4 -2.73875 | opp_overlap 2029167 2029176 2029177, overlap 2029160 2029164 2029166 GTTTCACCCCTCTAG GACAAGGGGC TAAA GCCCCCTGTC TCCTATTGGGCGACA Synpcc7942_1957 2029671 - 2029234 - | cyclic nucleotide-binding domain-containing protein Synpcc7942_1958 2030133 - 2029762 - | hypothetical protein Synpcc7942_1959 2030340 - 2032142 + | prolyl-tRNA synthetase Synpcc7942_1960 2032696 - 2032190 - | hypothetical protein Synpcc7942_1961 2032854 - 2033402 + | ferripyochelin binding protein Synpcc7942_1962 2033449 - 2033571 + | photosystem II PsbY protein TERM 1142 2033596 - 2033617 + T 100 -13 -5.252 | opp_overlap 2033590 2033588 GATAAAAGTGCTGGA TCCCCGCC CTAGCT GGCGGGGA TTTTTTATGGGGATC Synpcc7942_1963 2034767 - 2033871 - | hypothetical protein ubiA 2035696 - 2034764 - | prenyltransferase TERM 1143 2035379 - 2035389 + g 71 -8.2 -3.967 | overlap 2035380 2035381 GGACAGGCGACGGGA GGCC AAG GGCC TTTGCTTGGTGCGTT Synpcc7942_1965 2035730 - 2037379 + | exopolyphosphatase Synpcc7942_1966 2037413 - 2037670 + | hypothetical protein Synpcc7942_1967 2037772 - 2038638 + | undecaprenyl pyrophosphate phosphatase Synpcc7942_1968 2038685 - 2040043 + | hypothetical protein Synpcc7942_1969 2040474 - 2040851 + | transcriptional regulator AbrB TERM 1144 2040934 - 2040912 - T 100 -17.8 -3.6579 | opp_overlap 2040912 AAGTGATGGCAAGAA GCCTCCCCAA AAT TTGGGGAGGC TTTTGTCTGATCACC TERM 1145 2040912 - 2040934 + T 100 -17.8 -4.57353 | opp_overlap 2040912 AAGTGATGGCAAGAA GCCTCCCCAA AAT TTGGGGAGGC TTTTGTCTGATCACC Synpcc7942_1970 2041484 - 2041038 - | N-acyl-L-amino acid amidohydrolase Synpcc7942_1971 2042239 - 2041481 - | peptidase M20D, amidohydrolase Synpcc7942_1972 2043057 - 2042290 - | TPR repeat-containing protein Synpcc7942_1973 2044320 - 2043151 - | mannose-1-phosphate guanyltransferase TERM 1146 2043796 - 2043807 + g 75 -2.2 -5.06414 | CGTGCTCAGCGCTTC CTCA ACAC TGGG TTTTTCTTGAAAGGC Synpcc7942_1974 2045224 - 2044388 - | condensin subunit ScpA TERM 1147 2044980 - 2044943 - G 77 -9.9 -3.88583 | CAAACTCTCGACAAA CTCTTCCAGAACTTCCG CTGG CGGAAACTCCAGACGAG CCAAGGCATCGGCCT Synpcc7942_1975 2045763 - 2045410 - | hypothetical protein Synpcc7942_1976 2047397 - 2045793 - | NAD(P)H-quinone oxidoreductase subunit 4 TERM 1148 2047071 - 2047050 - G 74 -2.9 -4.99861 | TAGGAAGTAGAAAAA GCGCGTC TTGAAGGT GACGGGC CAAGCCGCCAGCATT TERM 1149 2047271 - 2047257 - G 72 -3.5 -4.73614 | GACCAGCAAAATAAA GTCGA CCAGC CCGAC GATCAGGGAGTACCA TERM 1150 2047523 - 2047498 - R 91 -11.1 -4.2772 | opp_overlap 2047498 TGCAATCAATAGAAA CGGGGGCTAGA TGAT CCCAACCCCCG TCGATTTGTAGTCTT Synpcc7942_1977 2049564 - 2047567 - | NAD(P)H-quinone oxidoreductase subunit F TERM 1151 2048776 - 2048743 - G 74 -2.9 -4.8622 | overlap 2048746 GCGGGCAATCAAAAA GACCCCAGCCGCAAC CATC GTGGCCGCGTGGATC AGTGCCGAGATCGGG TERM 1152 2049001 - 2049033 + g 71 -4.7 -4.57073 | opp_overlap 2049007, overlap 2049002 CATCCCTAGGAGCAG ACCAAAGTCACCAAC GCG GTTGGTGACAAAGGC TTTTTGGCAGGCATC TERM 1153 2049027 - 2049007 - G 95 -14.1 -3.86916 | opp_overlap 2049002 2049001 TAGGAGCAGACCAAA GTCACCAAC GCG GTTGGTGAC AAAGGCTTTTTGGCA Synpcc7942_1978 2049980 - 2049645 - | thioredoxin Synpcc7942_1979 2050736 - 2050014 - | membrane protein-like Synpcc7942_1980 2050905 - 2051894 + | LysR family transcriptional regulator Synpcc7942_1981 2052499 - 2051891 - | hypothetical protein TERM 1154 2052352 - 2052324 - G 86 -6.7 -5.10933 | TCAGGTAAAACAAAA CCTCGACCCTG CATCAGC CAAGGCCAAGG TGATTCGGACGGCGA Synpcc7942_1982 2052831 - 2052499 - | NADH dehydrogenase I subunit M Synpcc7942_1983 2052981 - 2054405 + | zeta-carotene desaturase / three-step phytoene desaturase Synpcc7942_1984 2054486 - 2055412 + | phytoene synthase Synpcc7942_1985 2056338 - 2055445 - | hypothetical protein Synpcc7942_1986 2057653 - 2056331 - | processing protease Synpcc7942_1987 2057819 - 2058133 + | hypothetical protein TERM 1155 2058183 - 2058206 + T 100 -8.8 -5.28826 | overlap 2058184 CCTTCTCTCACCCTA TCCAGCCAGC ATCT GCTGACTGGG TTTTTTATGGGCTTT TERM 1156 2058184 - 2058205 + T 79 -10.1 -3.75669 | overlap 2058183 CTTCTCTCACCCTAT CCAGCCAGC ATCT GCTGACTGG GTTTTTTATGGGCTT Synpcc7942_1988 2059857 - 2058724 - | hypothetical protein TERM 1157 2059186 - 2059171 - G 71 -4.6 -4.64613 | overlap 2059172 2059173 CATAAAGAATGAAAA CTGACC ATCG GGTCGG AGGCCATAGATAATC Synpcc7942_1989 2060818 - 2059907 - | cation diffusion facilitator family transporter Synpcc7942_1990 2061527 - 2060865 - | hypothetical protein TERM 1158 2061282 - 2061270 - G 77 -3.3 -5.16472 | AAAAATTGCAAAAAA GGCCA CTT CAGCC CAACGCACCCAAGTC TERM 1159 2061887 - 2061870 - R 100 -7.7 -5.28983 | opp_overlap 2061870, overlap 2061864 CCTAAAACACAAAAA GGCCCAA GTCA TTGAGCC TTTCGGGATTGCATC Synpcc7942_1991 2062321 - 2061920 - | large conductance mechanosensitive channel protein Synpcc7942_1992 2063434 - 2062388 - | translation initiation factor 2B subunit I Synpcc7942_1993 2063554 - 2064174 + | methylthioribulose-1-phosphate dehydratase Synpcc7942_1994 2064180 - 2064896 + | 2,3-diketo-5-methylthio-1-phosphopentane phosphatase Synpcc7942_1995 2065561 - 2064926 - | bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein Synpcc7942_1996 2065967 - 2065617 - | hypothetical protein TERM 1160 2066119 - 2066088 - R 86 -13.8 -2.92792 | overlap 2066085 2066090 2066092 ACTGAGCCGAAATCA TAGAGGCCTGCCGA TACT TCAGCAAGCCCCTA CTCATCATCTTAAGT TERM 1161 2066117 - 2066090 - R 75 -12 -3.01497 | overlap 2066088 2066085 2066092 TGAGCCGAAATCATA GAGGCCTGCCGA TACT TCAGCAAGCCCC TACTCATCATCTTAA TERM 1162 2066115 - 2066092 - R 72 -11 -3.06037 | overlap 2066090 2066088 2066085 AGCCGAAATCATAGA GGCCTGCCGA TACT TCAGCAAGCC CCTACTCATCATCTT Synpcc7942_1997 2066370 - 2066152 - | high light-inducible protein TERM 1163 2066908 - 2066929 + G 74 -11.5 -3.28924 | CCTATCACTTCCAGC CCCGTGTCG ATAG CGCCACGGG TTATCGCACCCAGTC Synpcc7942_1998 2066556 - 2067143 + | hypothetical protein TERM 1164 2067411 - 2067392 - T 100 -7.8 -5.4505 | opp_overlap 2067392 CCTGCCAACAAAAAA GCCTGAGC GCTT GCCCAGAC TCTTCACACACAGAT Synpcc7942_1999 2067735 - 2067448 - | RNA-binding region RNP-1 Synpcc7942_2000 2070180 - 2067958 - | penicillin-binding protein 1A minC 2071166 - 2070348 - | septum formation inhibitor Synpcc7942_2002 2071335 - 2072045 + | hypothetical protein Synpcc7942_2003 2072093 - 2072806 + | hypothetical protein Synpcc7942_2004 2073028 - 2073618 + | RNA polymerase sigma factor TERM 1165 2074216 - 2074191 - g 83 -7.6 -4.8048 | gap 1 CCTCGACATCAAAAA CTT-GCCGCCC TTAGC GGACGGCGAAG TCTACGTGCTCTGGA Synpcc7942_2005 2073628 - 2074449 + | hypothetical protein Synpcc7942_2006 2075284 - 2074598 - | hypothetical protein coaD 2075781 - 2075281 - | phosphopantetheine adenylyltransferase Synpcc7942_2008 2075871 - 2076353 + | hypothetical protein TERM 1166 2076488 - 2076474 - g 73 -8.6 -4.07687 | overlap 2076460 ATGGGGCCGGCAAAA CCTCAA TTC TTGAGG CGATCGCCTGGACCC Synpcc7942_2009 2076365 - 2079133 + | hypothetical protein TERM 1167 2079459 - 2079441 - T 100 -9.5 -5.31877 | opp_overlap 2079441 AGCCACTACAAAAAA GCCGGAC GCTCG GCCCGGC TCTGGTTCAAACTTG Synpcc7942_2010 2080140 - 2079493 - | cytochrome c-550 Synpcc7942_2011 2081391 - 2080210 - | ribonuclease Z Synpcc7942_2012 2081506 - 2082729 + | stage II sporulation protein D-like Synpcc7942_2013 2083253 - 2082726 - | hypothetical protein Synpcc7942_2014 2083843 - 2083250 - | hypothetical protein TERM 1168 2083757 - 2083745 - G 71 -4.7 -4.56775 | ACCGGGCCGCAAAAA CCAGC TGA GCAGG GCGGCTCCAATGCCT Synpcc7942_2015 2084685 - 2083852 - | hypothetical protein Synpcc7942_2016 2084922 - 2084803 - | photosystem II PsbX protein Synpcc7942_2017 2085077 - 2085370 + | hypothetical protein TERM 1169 2085482 - 2085453 - f 79 -3.5 -5.1615 | gap 1, overlap 2085454 2085455 CTAAGAGCTAAAAAA GCCGATGAGGGGAT TTG AACCCCTGACCG-C TCGATTACGAATCGA Synpcc7942_2018 2085584 - 2085829 + | hypothetical protein Synpcc7942_2019 2086762 - 2085893 - | hypothetical protein TERM 1170 2086702 - 2086684 - G 85 -4.4 -5.19879 | overlap 2086686 2086697 2086698 TCGCAAACAGAAAAA GAGCCGCC CAT AACGGCAC TGTCGCCAGTCCTGC infB 2089937 - 2086845 - | translation initiation factor IF-2 Synpcc7942_2021 2090381 - 2090088 - | hypothetical protein nusA 2091703 - 2090378 - | transcription elongation factor NusA TERM 1171 2090723 - 2090692 - G 77 -8 -4.25104 | gap 1 CGTCGTTGACCAAAA CGTGGGCGAT-CCGA CCT TCGGGATCGACCAAG CGCACTTCCTGAACC Synpcc7942_2023 2092221 - 2091760 - | hypothetical protein TERM 1172 2092262 - 2092243 - R 100 -6.4 -5.7946 | CTGTCAATAAAAAAA GCGGGCAA ACAC TTACCCAC TCCTCCAAAAGCTGC TERM 1173 2092291 - 2092273 - R 70 -6.7 -4.08767 | gap 1, opp_overlap 2092272 CCCACTCCTCCAAAA GCTG-CGG TAGA CCGACAGC AATTTCGCTGAAAGA Synpcc7942_2024 2093258 - 2092386 - | hypothetical protein Synpcc7942_2025 2093363 - 2094448 + | glycosyltransferase Synpcc7942_2026 2094451 - 2095854 + | glycosyltransferase Synpcc7942_2027 2095857 - 2096600 + | glycosly transferase Synpcc7942_2028 2096615 - 2097676 + | glycosyltransferase TERM 1174 2097767 - 2097754 - f 70 -3.7 -4.61199 | overlap 2097756 ATCGCACACAGAAAA CCGCG ATCG CGCCG ATAGACTAGCGAGGT pgi 2097799 - 2099385 + | glucose-6-phosphate isomerase TERM 1175 2099514 - 2099480 - T 100 -16.6 -5.02476 | overlap 2099484 2099509 2099510 AGATCCTGCAAAAAA CAAAGCTGCTGCTCTC AAA GAAAGCAACAGCTTCG GCAACGCTAATGGTT TERM 1176 2099510 - 2099484 - T 100 -13.8 -5.04249 | overlap 2099480 2099509 CCTGCAAAAAACAAA GCTGCTGCTCTC AAA GAAAGCAACAGC TTCGGCAACGCTAAT Synpcc7942_2030 2100300 - 2099548 - | phycobilisome rod-core linker polypeptide Synpcc7942_2031 2101004 - 2100423 - | hypothetical protein TERM 1177 2101563 - 2101580 + G 71 -8.3 -3.9243 | TGGGCTTTTTGTTTG GGCCGGC ACTG GGCGGCC TTCTTTCAGGCATTA Synpcc7942_2032 2101118 - 2102308 + | multidrug-efflux transporter quinolene resistance protein NorA Synpcc7942_2033 2102330 - 2103022 + | hypothetical protein TERM 1178 2103114 - 2103149 + F 70 -5.9 -4.21194 | CACTGGGGGCCTCGA CTCCCCCAGCCCCCC GCAACA GGAGGGTCGGTGGGG TTTTGACTGGTGAGA Synpcc7942_2034 2103270 - 2104508 + | hypothetical protein Synpcc7942_2035 2105518 - 2104481 - | hypothetical protein Synpcc7942_2036 2106526 - 2105522 - | hypothetical protein Synpcc7942_2037 2107163 - 2106519 - | hypothetical protein Synpcc7942_2038 2108059 - 2107367 - | transcriptional regulator TERM 1179 2107794 - 2107780 - G 88 -2.8 -5.63103 | overlap 2107791 2107793 CTGGAACCAAAAAAA CCTGTT CAG AAGAGG CTTCATAGCCCTTAA TERM 1180 2107877 - 2107890 + g 73 -5.3 -4.58283 | TAAGCTTGCTGACGT TTGAG CATT CTCAA TTTTTGACAGCATTC Synpcc7942_2039 2109339 - 2108533 - | hypothetical protein TERM 1181 2108621 - 2108639 + g 70 -5.2 -4.4846 | overlap 2108610 ATTTGCAGCTGTTCA CGCACTTG AAT CAGTTGCG TTTCTTGTTCAGTTC Synpcc7942_2040 2110133 - 2109423 - | sugar fermentation stimulation protein A TERM 1182 2110080 - 2110068 - G 81 -3.3 -5.2112 | AATATCAGCAAAAAA GCGTT TGT AGCGC TGGAGCAAGCGCCCC TERM 1183 2111557 - 2111583 + G 72 -10.8 -3.39772 | overlap 2111555 GCTGCCCCTTTTGCC CTGGGGGGGCTG GAT CACCCTCCTCAG TATTTGGAGCTTTGG Synpcc7942_2041 2110181 - 2111803 + | integral membrane protein MviN Synpcc7942_2042 2112136 - 2111810 - | hypothetical protein TERM 1184 2112225 - 2112184 - R 81 -8.7 -4.36778 | gap 1, overlap 2112186 AAAGACAACGGAAAA GAGTAGGCGGCCCCCAGA TATCGGT TCAAGGAGCCGCCCAC-C ACTAATCACTAGATT TERM 1185 2112224 - 2112186 - R 91 -12.4 -3.76769 | overlap 2112184 AGACAACGGAAAAGA GTAGGCGGCCCCCAGA TATCGGT TCAAGGAGCCGCCCAC CACTAATCACTAGAT Synpcc7942_2043 2112672 - 2112253 - | S-adenosylmethionine decarboxylase proenzyme Synpcc7942_2044 2113990 - 2112977 - | hypothetical protein Synpcc7942_2045 2117721 - 2114134 - | condensin subunit Smc Synpcc7942_2046 2118062 - 2118451 + | glycine cleavage system protein H Synpcc7942_2047 2118510 - 2121371 + | glycine dehydrogenase TERM 1186 2121410 - 2121423 + T 73 -9.5 -3.60348 | AATTTCTGAGGGCAA GGGGC TGAT GCCCC TTATCTCATGTTGAA TERM 1187 2121463 - 2121494 + T 77 -7.2 -4.45738 | opp_overlap 2121464 2121468, overlap 2121458 2121464 CAACTTCTTTCAACG ACAAAGCCCCCAAC CGAA GTCAGGGGCTTTGC TTTGTTATTGGCCTA TERM 1188 2121464 - 2121493 + T 74 -10.7 -3.2672 | opp_overlap 2121464 2121468, overlap 2121463 2121458 AACTTCTTTCAACGA CAAAGCCCCCAAC CGAA GTCAGGGGCTTTG CTTTGTTATTGGCCT TERM 1189 2121493 - 2121464 - T 90 -15.1 -2.71263 | opp_overlap 2121464 2121463 2121458, overlap 2121468 AACTTCTTTCAACGA CAAAGCCCCCAAC CGAA GTCAGGGGCTTTG CTTTGTTATTGGCCT TERM 1190 2121489 - 2121468 - T 83 -10.1 -4.05446 | opp_overlap 2121464 2121463 2121458, overlap 2121464 TCTTTCAACGACAAA GCCCCCAAC CGAA GTCAGGGGC TTTGCTTTGTTATTG psaB 2123725 - 2121521 - | photosystem I P700 chlorophyll a apoprotein A2 TERM 1191 2121916 - 2121932 + g 71 -4.4 -4.62069 | gap 1 ACTGAGCCACATTGC CCTG-CC AAAC GGTCAGG TTTTTCCAGTGCCAG psaA 2126036 - 2123745 - | photosystem I P700 chlorophyll a apoprotein A1 TERM 1192 2125805 - 2125788 - G 71 -7.7 -4.1347 | GCTCAACCAGATAAA GATCACC GCAA GGTGACC AAAGTGAGCGCTGAA TERM 1193 2126247 - 2126237 - H 82 -2.4 -5.45802 | CTCTGAAAACAAAAA CAGC GAC GCAG GATTCCACACGGGAA Synpcc7942_2050 2126401 - 2127864 + | hypothetical protein Synpcc7942_2051 2129303 - 2127861 - | hypothetical protein Synpcc7942_2052 2130186 - 2129314 - | oligopeptides ABC transporter permease protein TERM 1194 2129843 - 2129814 - G 88 -2.7 -5.52384 | gap 1, overlap 2129815 2129817 2129818 CGTCCATCAAAAAAA CCAGGGCGCGATCG AGC CAACCGC-CCCAGT AACCGGCAATCAAGC Synpcc7942_2053 2130328 - 2132259 + | peptidase Synpcc7942_2054 2133197 - 2132256 - | hypothetical protein Synpcc7942_2055 2133299 - 2134543 + | 2-octaprenyl-6-methoxyphenyl hydroxylase Synpcc7942_2056 2134608 - 2134985 + | hypothetical protein TERM 1195 2135023 - 2135045 + F 100 -12 -4.67968 | GCTTCTCCTCCTCAA GCCGGTTGTC TGA GACAGTCGGC TTTGTTGTTTGTTAC Synpcc7942_2057 2135125 - 2135757 + | acyl-phosphate glycerol-3-phosphate acyltransferase TERM 1196 2135787 - 2135799 + T 73 -9.1 -3.5774 | overlap 2135788 CCAATTGTTGCGATC GCAGC GCT GCTGC TTTGACCGCTTCGAT Synpcc7942_2058 2136561 - 2135767 - | pyrroline-5-carboxylate reductase TERM 1197 2136647 - 2136607 - R 100 -14.8 -3.43071 | TCCTAGAGCAACGAA TGCCTGCCAAGCGCGATC GCAGG GATCGAACTCGACAGGCA AACAGATGTGGTGCC Synpcc7942_2059 2137272 - 2136697 - | hypothetical protein Synpcc7942_2060 2138169 - 2137504 - | hypothetical protein Synpcc7942_2061 2138463 - 2138194 - | hypothetical protein Synpcc7942_2062 2139820 - 2138585 - | lycopene cyclase (CrtL-type) surE 2140667 - 2139891 - | stationary phase survival protein SurE pheS 2140803 - 2141804 + | phenylalanyl-tRNA synthetase subunit alpha TERM 1198 2141859 - 2141832 - T 86 -12.8 -3.46824 | opp_overlap 2141834, overlap 2141834 GCACCAACGAATCAA GAGGCTTTGCAG AATT CTGCAAAGCCTT TTTCAATAGCCAATT TERM 1199 2141857 - 2141834 - T 100 -15.4 -3.30128 | opp_overlap 2141834, overlap 2141832 ACCAACGAATCAAGA GGCTTTGCAG AATT CTGCAAAGCC TTTTTCAATAGCCAA TERM 1200 2141834 - 2141857 + T 100 -15.4 -4.65895 | opp_overlap 2141834 2141832 ACCAACGAATCAAGA GGCTTTGCAG AATT CTGCAAAGCC TTTTTCAATAGCCAA Synpcc7942_2065 2142182 - 2141928 - | hypothetical protein Synpcc7942_2066 2143310 - 2142279 - | tRNA-dihydrouridine synthase A TERM 1201 2143250 - 2143209 - G 71 -4.3 -4.57073 | gap 1 GATCTGGCGCAAAAA GTAGCGGCAGTG-GCGATCG GTG CGATCGAGCATGGGCGCCAC ACTCAGACGATGACT Synpcc7942_2067 2143337 - 2144584 + | hypothetical protein Synpcc7942_2068 2145103 - 2144549 - | hypothetical protein TERM 1202 2144984 - 2144974 - G 71 -6.8 -4.19506 | AGGGCAAGGGCAAAA GGCT CTC AGCC GGGCGCCGCAGACTG Synpcc7942_2069 2146341 - 2145109 - | fimbrial assembly protein PilC-like Synpcc7942_2070 2147454 - 2146366 - | twitching motility protein TERM 1203 2146904 - 2146937 + g 82 -8.1 -4.62872 | TTGGCAAAACTCTTG GTATCCTCACCCAGC TGAC GCTGGTGGATGATAC TTTTTGCCGGTTGAT Synpcc7942_2071 2149525 - 2147525 - | ATPase TERM 1204 2149492 - 2149475 - G 79 -8.5 -4.39989 | ACCAAACGATGAAAA CTGATTG AGGG CAATCAG GGCGTAACGGGGAGA TERM 1205 2150235 - 2150251 + G 71 -9.4 -3.7791 | GCGTCTCGCCGATGC GGGCTG AGGGC CAGCCC TTTGATCCCTCATTG Synpcc7942_2072 2149802 - 2150425 + | heat shock protein GrpE Synpcc7942_2073 2150530 - 2152497 + | molecular chaperone DnaK Synpcc7942_2074 2152639 - 2153769 + | heat shock protein DnaJ Synpcc7942_2075 2153766 - 2154017 + | hypothetical protein Synpcc7942_2076 2154014 - 2155066 + | ribosome-associated GTPase Synpcc7942_2077 2155133 - 2155549 + | hypothetical protein Synpcc7942_2078 2156565 - 2155927 - | phosphoglycerate mutase Synpcc7942_2079 2157755 - 2156574 - | acetate kinase TERM 1206 2159488 - 2159498 + G 81 -4.6 -5.02476 | overlap 2159485 CCTACTTGCTCACGG GTCG CCA CGGC TTTTTTGCCACCTAT TERM 1207 2159980 - 2159992 + G 71 -7.7 -4.13014 | TGGCGGCAACAGCGT TGCTC CGT GAGCA TTTTCCCGATCTCAA Synpcc7942_2080 2158038 - 2160428 + | putative phosphoketolase TERM 1208 2160499 - 2160464 - T 72 -9.7 -3.3568 | opp_overlap 2160464, overlap 2160462 CAACTCAAAGTAATA GCCCTAGCTCACTTC AGTTAA GAGGAAAGCTAGGGC TTTGTTGATCGTGTT TERM 1209 2160464 - 2160499 + T 85 -9.7 -4.28713 | opp_overlap 2160464 2160462 CAACTCAAAGTAATA GCCCTAGCTCACTTC AGTTAA GAGGAAAGCTAGGGC TTTGTTGATCGTGTT Synpcc7942_2081 2161507 - 2160557 - | glycosyl transferase Synpcc7942_2082 2163575 - 2161587 - | elongation factor G Synpcc7942_2083 2163925 - 2164596 + | multiple antibiotic resistance (MarC)-related proteins TERM 1210 2164619 - 2164587 - T 74 -10.6 -3.21099 | overlap 2164589 TCGGGCCATTATCAA TAGTCCCTGAGCGA TCGCG TCACCCAGGGACTT CAGACACAGTCAGTT TERM 1211 2164617 - 2164589 - T 85 -13.2 -3.17051 | overlap 2164587 GGGCCATTATCAATA GTCCCTGAGCGA TCGCG TCACCCAGGGAC TTCAGACACAGTCAG Synpcc7942_2084 2165670 - 2164651 - | bacteriochlorophyll/chlorophyll a synthase Synpcc7942_2085 2166759 - 2165683 - | anion transporting ATPase TERM 1212 2166441 - 2166431 - G 71 -6.8 -4.2704 | overlap 2166439 GTCAGCAGTAATAAA GGCT CAA AGCC CGGCAACAGGGCCAG Synpcc7942_2086 2166991 - 2166791 - | hypothetical protein Synpcc7942_2087 2167149 - 2167916 + | imidazole glycerol phosphate synthase subunit HisF Synpcc7942_2088 2168002 - 2168316 + | hypothetical protein TERM 1213 2168620 - 2168605 - T 100 -11.8 -5.32882 | GACCACCATAAAAAA GGCCGC GATA GCGGCC CTAGGGAAGTGATTT Synpcc7942_2089 2169585 - 2168671 - | thioredoxin domain-containing protein TERM 1214 2168850 - 2168874 + g 70 -2.8 -4.77036 | CAACATCCAGTTTTT GAACCGCTTG TTGAC CAAACAGTTC TTTTTGGTCGTGACA TERM 1215 2170919 - 2170941 + G 83 -9 -4.66163 | overlap 2170922 ACTGTGGAGCTGGCG CCAGCGGCCG AAA CCGCCGCTCG TTTTTACCTACGCAT Synpcc7942_2090 2169842 - 2171179 + | homoserine dehydrogenase TERM 1216 2171444 - 2171462 + G 72 -13.2 -2.51464 | overlap 2171443 2171446 GATGCTTTCTGCTGC CAGCCAGA GCG TCTGGCTG ATTCCTGGCTACTCC Synpcc7942_2091 2171430 - 2173268 + | NAD(P)H-quinone oxidoreductase subunit F Synpcc7942_2092 2173280 - 2174821 + | proton-translocating NADH-quinone oxidoreductase, chain M TERM 1217 2175294 - 2175308 + G 70 -10 -3.53012 | AGTTTGCCGAAGCCT GCATGG ACG CCATGC TTTGGCACCAAGGCA Synpcc7942_2093 2174870 - 2176162 + | CO2 hydration protein TERM 1218 2176151 - 2176164 + F 88 -5.3 -5.23316 | opp_overlap 2176151 GACATCCAAAGCCAA GACTA CCGC TAGTC TTTTTTGCTCTGCTG TERM 1219 2176231 - 2176243 + G 81 -10.5 -4.17316 | opp_overlap 2176220 AAATCCTTGAGGTTG CCCGC GAG GCGGG TTGTTTTCAGACGCT Synpcc7942_2094 2176209 - 2176610 + | Beta-Ig-H3/fasciclin TERM 1220 2176702 - 2176739 + F 86 -7 -5.01732 | GCGACCGCCTTAAGC GCACTCAGCTTGTTTC AGAACA GTCATGAGCTGAGTGC TTTTTTAGCAAAGTT Synpcc7942_2095 2176855 - 2177238 + | hypothetical protein Synpcc7942_2096 2177467 - 2179461 + | diguanylate cyclase with GAF sensor Synpcc7942_2097 2180391 - 2179471 - | hypothetical protein Synpcc7942_2098 2180457 - 2181008 + | dTDP-4-dehydrorhamnose 3,5-epimerase Synpcc7942_2099 2181005 - 2181874 + | dTDP-4-dehydrorhamnose reductase Synpcc7942_2100 2181871 - 2182944 + | dTDP-glucose 4,6-dehydratase TERM 1221 2183791 - 2183780 - g 75 -5.8 -4.58395 | opp_overlap 2183779 2183787 GCCACTCCGTAAAAA TGGC TATG GCCA GTATCTACTGGACCT Synpcc7942_2101 2182941 - 2183825 + | glucose-1-phosphate thymidylyltransferase Synpcc7942_2102 2183837 - 2184076 + | NAD-reducing hydrogenase gamma Synpcc7942_2103 2184523 - 2184119 - | hypothetical protein TERM 1222 2184699 - 2184676 - R 100 -9.6 -5.27477 | opp_overlap 2184684 ATTCCAATCAAAAAA GGAGAGAAGC GGAA ACCTCTCTCC TCCAGTGATCAAGAA Synpcc7942_2104 2185180 - 2184740 - | cyanate hydratase TERM 1223 2185119 - 2185138 + g 85 -4.3 -5.22039 | AATTGCTCAAGCTCA GTAAAGG TAATTC CCTTTGC TTTTTTCGCTTTCAG Synpcc7942_2105 2186060 - 2185191 - | nitrate transport ATP-binding subunits C and D Synpcc7942_2106 2186855 - 2186064 - | nitrate transport permease TERM 1224 2186381 - 2186370 - G 71 -4.4 -4.64657 | CGAAACCTTCAAAAA GTCA GGAT TGAC ATTCGCCACCCCAAA Synpcc7942_2107 2188454 - 2186865 - | ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like Synpcc7942_2108 2188718 - 2189086 + | hypothetical protein Synpcc7942_2109 2189141 - 2190916 + | ATPase fmt 2191900 - 2190917 - | methionyl-tRNA formyltransferase TERM 1225 2191914 - 2191889 - G 72 -2.5 -5.00616 | gap 1, overlap 2191892 GGGGGTTCCAAAAAA GACGACGCGCAC GGT GTTCGC-TCCTC GCTTCAAAACAGGGG Synpcc7942_2111 2192025 - 2192933 + | xylose repressor Synpcc7942_2112 2193502 - 2192960 - | hypothetical protein TERM 1226 2193355 - 2193330 - G 70 -5.4 -4.36914 | GGCGCTTCCAGAAAA CAGGCTTCGC TCTGCT GCAAAGTCTG CCAGCGTTCCGCCAA TERM 1227 2194710 - 2194700 - g 71 -6.8 -4.258 | GGATTCACGAAGAAA GCTC AGT GAGC AGTATGTTCCGCTAG Synpcc7942_2113 2193730 - 2194725 + | ribose-phosphate pyrophosphokinase Synpcc7942_2114 2194827 - 2195990 + | adaptive-response sensory kinase TERM 1228 2196208 - 2196229 + T 95 -9.5 -4.98531 | opp_overlap 2196208 TAATCTTCTCAAAAA TCCTGTTCA AGTG TGAGCAGGA TTTTTGCTTTAACGC TERM 1229 2196229 - 2196208 - T 77 -7.3 -4.58283 | opp_overlap 2196208 TAATCTTCTCAAAAA TCCTGTTCA AGTG TGAGCAGGA TTTTTGCTTTAACGC Synpcc7942_2115 2197128 - 2196274 - | hypothetical protein Synpcc7942_2116 2198150 - 2197290 - | hypothetical protein gatA 2199594 - 2198155 - | aspartyl/glutamyl-tRNA amidotransferase subunit A TERM 1230 2199648 - 2199638 - R 85 -8.2 -4.46212 | CTCTTCAGTATAAAA GCCG GGG CGGC GGCTCTCGATATCTA Synpcc7942_2118 2199981 - 2199694 - | hypothetical protein TERM 1231 2200061 - 2200073 + r 71 -3.3 -4.75174 | overlap 2200062 AGGCATGGTTATACT CCGAG CCT CTCGA TTTTTCAATTCACTG Synpcc7942_2119 2201656 - 2200097 - | RNA methyltransferase TrmH, group 3 Synpcc7942_2120 2202114 - 2201698 - | ribonuclease III Synpcc7942_2121 2202509 - 2202117 - | anti-anti-sigma regulatory factor, SpoIIAA TERM 1232 2202314 - 2202304 - G 70 -5.4 -4.44915 | opp_overlap 2202295, overlap 2202295 2202306 GAACTATCGATAAAA TCGA TCT TCGA GAGATCTAGAATAGC Synpcc7942_2122 2203735 - 2202560 - | carbamoyl phosphate synthase small subunit TERM 1233 2203761 - 2203718 - G 74 -7.4 -4.27617 | gap 1, opp_overlap 2203719 2203744 2203747, overlap 2203719 CATAGCGCAGCAAAA GCCCGAGATC-CGAACCATTA TCG CACTGGCTCGCGATCGCGGGT CGATTTCGAGTTTTA trpD 2204847 - 2203801 - | anthranilate phosphoribosyltransferase Synpcc7942_2124 2205879 - 2204908 - | acetylpolyamine aminohydolase TERM 1234 2205272 - 2205247 - G 77 -7.5 -4.39828 | gap 1, overlap 2205249 2205251 AACATTTTCATAAAA GC-CAGTCTCCG AGG CGGAGCCCGTGC CAGGGTAAGCCGGAC TERM 1235 2205458 - 2205446 - G 88 -7.7 -5.14985 | overlap 2205450 CCAAACAGACAAAAA CCCAT GCC ATGGG TGGCCAGCGCGTGAT TERM 1236 2205853 - 2205826 - G 71 -4.8 -4.58395 | GTCATGGTCCAAAAA GCGATCGCTG TAGACAAT CGGCAATCGC CCTGATAGGGCCTGC Synpcc7942_2125 2206002 - 2206403 + | hypothetical protein Synpcc7942_2126 2206804 - 2206400 - | hypothetical protein TERM 1237 2207124 - 2207138 + H 79 -10 -3.77588 | opp_overlap 2207112 2207111 2207122 GACTCTGAAACAGTT GCTGTC TGA GACAGC TTGTTCATCTGCAGT Synpcc7942_2127 2207167 - 2207346 + | phycobilisome degradation protein NblA Synpcc7942_2128 2208081 - 2207506 - | thioredoxin TERM 1238 2207606 - 2207656 + g 77 -10.5 -3.78953 | gap 2 AATTCTGAAAGGTTG CCTCGA-GCGTTGGT-GTAGGGCAG AGG CTGGGCTTCGACCAGCGCGTCGAGG TTTGCTGCTAGGACT Synpcc7942_2129 2208154 - 2208558 + | iron-sulfur cluster binding protein TERM 1239 2208602 - 2208617 + G 76 -6.8 -4.56187 | AATGCCCTCTTTATT CCAGCT TGGT GGCTGG TTATTTTTACTTATA Synpcc7942_2130 2208566 - 2209150 + | hypothetical protein Synpcc7942_2131 2211255 - 2209183 - | soluble lytic transglycosylase TERM 1240 2209811 - 2209789 - G 71 -7.6 -4.05747 | CAGAGCGGAGATAAA GCGATCGCTG GGG CTGGGATCGC GGCTAGGGCCTTCCT TERM 1241 2212001 - 2211972 - g 75 -10.1 -3.74693 | gap 1, overlap 2211948 2211973 GCCGATGGCAGCAAA CTCGATCGCCAGCT CCA AGCC-GCGATCGAA GCGGGCCTGCGCGGT Synpcc7942_2132 2211549 - 2212967 + | phosphoglucosamine mutase Synpcc7942_2133 2213476 - 2212970 - | hypothetical protein Synpcc7942_2134 2214708 - 2213659 - | cell wall hydrolase/autolysin Synpcc7942_2135 2215456 - 2214773 - | hypothetical protein TERM 1242 2214982 - 2214956 - G 81 -10.9 -4.08767 | CGGATCGTTGGAAAA CAGGAGCAACT GCACT AGTTGCCCCCG TCGCAATTTCTTGTA Synpcc7942_2136 2216287 - 2215466 - | dihydrodipicolinate reductase TERM 1243 2215779 - 2215790 + g 74 -7.2 -4.32034 | overlap 2215765 ATGGCCGTGCCACTG GGCG CATC CGCC TTTTGGTCGTGATGC TERM 1244 2215904 - 2215915 + g 75 -5.8 -4.57073 | opp_overlap 2215902 2215901 2215904, overlap 2215902 2215901 AGGAATTACCAAGCA GCCA ACGC TGGC TTTTTCGGCAAACTC TERM 1245 2217233 - 2217222 - g 75 -2.2 -5.0133 | opp_overlap 2217188, overlap 2217227 TACGTCTTCAAAAAA GACA GCGA CGTC AACGTCAACTTTGAA Synpcc7942_2137 2216577 - 2220563 + | magnesium chelatase TERM 1246 2220599 - 2220634 + F 100 -4.9 -5.48514 | gap 1, opp_overlap 2220599 AACATATCCCAACAA CTCCAAGAGGTACT TATGCTAAC GGTAC-TCTTGGAG TTTTTCTTTGTTGAT Synpcc7942_2138 2221934 - 2222959 + | hypothetical protein TERM 1247 2223055 - 2223067 + F 72 -4.9 -4.68103 | TTTCCGCGAAAGCTT TGATA GTT TATCA TTTTATTGAGCTTCA Synpcc7942_2139 2223602 - 2224213 + | glutathione S-transferase Synpcc7942_2140 2224311 - 2224742 + | cytidine deaminase TERM 1248 2225693 - 2225707 + F 72 -7.2 -4.21631 | TAGTTTCTAAAGGCG CAATAG TTA CTATTG TTTATTAAATCCATT Synpcc7942_2141 2226031 - 2226495 + | hypothetical protein Synpcc7942_2142 2226803 - 2226468 - | translation initiation factor Sui1 TERM 1249 2226641 - 2226658 + g 71 -7.7 -4.07568 | GCCGATGCTGGAAGC CCGTGAT GATC GTCACGG TTTTGCCGCCGCGCC Synpcc7942_2143 2226908 - 2228170 + | tryptophan synthase subunit beta TERM 1250 2228269 - 2228290 + T 100 -12.3 -5.252 | CTGGGTCATTGGCAA GTCTCGGCA GTTC TGCCGGGAC TTTTTTGTGACGATA Synpcc7942_2144 2229017 - 2228529 - | nuclease (SNase-like) Synpcc7942_2145 2229910 - 2229023 - | hypothetical protein Synpcc7942_2146 2230009 - 2230323 + | hypothetical protein Synpcc7942_2147 2230316 - 2230726 + | hypothetical protein Synpcc7942_2148 2230823 - 2231845 + | ATPase Synpcc7942_2149 2231897 - 2232757 + | ABC-2 type transport system permease protein TERM 1251 2233663 - 2233682 + G 75 -2.2 -5.1244 | gap 1, overlap 2233653 2233667 ACAAATCGGGCTGCT GATCGCTTT GTT AGAGC-ATC TTTTTATATTGATGC Synpcc7942_2150 2232979 - 2234022 + | penicillin V acylase precursor. cysteine peptidase. MEROPS family C59 Synpcc7942_2151 2236354 - 2234141 - | cellulose synthase (UDP-forming) Synpcc7942_2152 2237643 - 2236384 - | hypothetical protein TERM 1252 2236778 - 2236791 + g 89 -6.7 -5.28826 | ACTCCTTGAATCGGA GCCTT AATT AAGGC TTTTTTCTGAAGTTT TERM 1253 2238057 - 2238046 - g 74 -3 -4.95957 | overlap 2238035 CAAACTAACGAAAAA TGAT CTTC ATCA GCTCATTGAAGAGGT TERM 1254 2238238 - 2238214 - g 74 -7.9 -4.30576 | opp_overlap 2238225, overlap 2238216 GGTGGAGGAGCAAAA TCGGATGATCG CAG CCATCATCCAA CGGTTGATCGATGGC TERM 1255 2238225 - 2238255 + G 83 -7.7 -4.84017 | gap 1, opp_overlap 2238216 2238214 AAAATCGGATGATCG CAGCCATC-ATCCA ACGG TTGATCGATGGCTG TTTTTCTGAGCAATT Synpcc7942_2153 2237948 - 2238427 + | hypothetical protein Synpcc7942_2154 2238704 - 2238501 - | hypothetical protein Synpcc7942_2155 2239176 - 2238733 - | hypothetical protein TERM 1256 2239272 - 2239249 - R 100 -14.6 -3.85909 | overlap 2239227 CCATCGAAAGGGAAA GGCTGCTGCC TAGC GGCAACAGCC TCAACTCTCAAGACG Synpcc7942_2156 2240726 - 2239305 - | L-glutamine synthetase Synpcc7942_2157 2241084 - 2240800 - | hypothetical protein TERM 1257 2241034 - 2241048 + g 78 -4.2 -4.87786 | TCGCAGGCAGGACAA GGCTGC ATG GTAGTC TTTTTCTGAAATTCC Synpcc7942_2158 2241120 - 2241629 + | allophycocyanin, beta subunit TERM 1258 2241698 - 2241675 - f 76 -12.4 -2.54896 | opp_overlap 2241675, overlap 2241671 GCCGGATTGAATCGA CAGGGCAGGC AAAC GCTTGCCCTG TTTTCGTTGAGAGAC TERM 1259 2241675 - 2241698 + F 100 -14.6 -4.4078 | opp_overlap 2241675 2241671 GCCGGATTGAATCGA CAGGGCAGGC AAAC GCTTGCCCTG TTTTCGTTGAGAGAC Synpcc7942_2159 2241719 - 2242651 + | hypothetical protein TERM 1260 2243356 - 2243343 - g 73 -5.2 -4.66163 | overlap 2243344 AGCTGCAGCCAAAAA GGGC TGAGCT GCCC GCCGGGTGTGTCGCC Synpcc7942_2160 2242713 - 2243867 + | alanine-glyoxylate aminotransferase TERM 1261 2243907 - 2243959 + G 89 -11.6 -4.31379 | gap 1, opp_overlap 2243908, overlap 2243908 CTCGACTTAGATCAA ATTCTGCAAGTCTTAAG-TCAAAGT CCTG ACTTTGGTCTTGAGGCTTGCAGGAA TTTTGCTCAGTTCCT TERM 1262 2243908 - 2243958 + G 83 -15.1 -3.18105 | gap 1, opp_overlap 2243908, overlap 2243907 TCGACTTAGATCAAA TTCTGCAAGTCTTAAG-TCAAAGT CCTG ACTTTGGTCTTGAGGCTTGCAGGA ATTTTGCTCAGTTCC Synpcc7942_2161 2243880 - 2244536 + | hypothetical protein Synpcc7942_2162 2244940 - 2244725 - | hypothetical protein Synpcc7942_2163 2245037 - 2245525 + | hypothetical protein Synpcc7942_2164 2245607 - 2246992 + | cell death suppressor protein Lls1-like Synpcc7942_2165 2247369 - 2246989 - | hypothetical protein Synpcc7942_2166 2247857 - 2247486 - | hypothetical protein Synpcc7942_2167 2248468 - 2248016 - | hypothetical protein Synpcc7942_2168 2248681 - 2251065 + | ATP-dependent DNA helicase Rep Synpcc7942_2169 2251483 - 2251160 - | hypothetical protein Synpcc7942_2170 2251548 - 2251997 + | ferric uptake regulator family protein TERM 1263 2252162 - 2252139 - T 100 -8 -5.72616 | ACCCACACAAAAAAA GGCAGCTGGC TGAA GCTCGCTGCC CCTCTGGGGATGAAT Synpcc7942_2171 2252726 - 2252196 - | starvation induced DNA binding protein Synpcc7942_2172 2252961 - 2253221 + | hypothetical protein Synpcc7942_2173 2253218 - 2253778 + | hypothetical protein Synpcc7942_2174 2253875 - 2254504 + | CRP/FNR family transcriptional regulator TERM 1264 2254535 - 2254557 + T 93 -9.8 -4.58395 | opp_overlap 2254531 2254535 GCAGTTACAAACGAA GACGCCCAGG GGT TCTGGACGTC TTTTTAAGGACTCAA TERM 1265 2254557 - 2254535 - T 85 -11.3 -3.61988 | opp_overlap 2254535, overlap 2254531 GCAGTTACAAACGAA GACGCCCAG GGGTT CTGGACGTC TTTTTAAGGACTCAA TERM 1266 2254725 - 2254691 - T 100 -18.8 -5.30686 | AATATCCATAAAAAA CTCCTCTCTACAGC GCGCGTT GCTGTAGAGAGGAG GTGAAGTGATCCAAT Synpcc7942_2175 2255847 - 2254747 - | transport system substrate-binding protein TERM 1267 2255004 - 2255022 + g 78 -4.4 -4.8622 | overlap 2255005 CAGCACCGCTGATGT TGACGTGG GTG CCCCGTCC TTTTTGGTTGGGGAA Synpcc7942_2176 2257096 - 2255951 - | hypothetical protein TERM 1268 2257284 - 2257298 + G 71 -4.2 -4.59773 | overlap 2257285 CTGCGACTGACCAAT TTTGCC CAA GGCGAG TTTTTGACCCTCGGC TERM 1269 2257375 - 2257395 + G 83 -11.1 -3.95584 | TGGCCATTCCTCTCG GGGCGATCG CGA CGATCGCAC TTTGCTTGCTGGGCG Synpcc7942_2177 2257143 - 2258033 + | integral membrane protein of the ABC-type Nat permease for neutral amino acids NatD Synpcc7942_2178 2258395 - 2258054 - | hypothetical protein Synpcc7942_2179 2259359 - 2258445 - | putative lipid kinase TERM 1270 2259473 - 2259446 - R 100 -13.5 -4.14392 | gap 1 CGGGAACGGCCAAAA GCGGGGTCGAGG GACTG CCT-GACCCCGC CGATCTGGGCGGTCG Synpcc7942_2180 2259927 - 2259490 - | bacterioferritin comigratory protein Synpcc7942_2181 2261191 - 2259980 - | hypothetical protein Synpcc7942_2182 2261429 - 2261244 - | hypothetical protein TERM 1271 2261442 - 2261473 + r 70 -6.7 -4.14739 | gap 2, overlap 2261449 CATTCTCCTGATCTA GCACGATCCCTAGAG TGTG CTCTAGGG-TTG-GC TTTTGGGATAAGTAA TERM 1272 2261449 - 2261468 + r 83 -12.2 -3.37537 | overlap 2261442 CTGATCTAGCACGAT CCCTAGAG TGTG CTCTAGGG TTGGCTTTTGGGATA Synpcc7942_2183 2262335 - 2261556 - | RNase HI TERM 1273 2261725 - 2261712 - G 76 -5.3 -4.7254 | opp_overlap 2261712 2261716 ACTCGTGATCAAAAA TTGCT GCTC AGCAA TTGCTGCAGCAATTT Synpcc7942_2184 2262518 - 2263318 + | hypothetical protein Synpcc7942_2185 2263403 - 2263807 + | hypothetical protein Synpcc7942_2186 2264073 - 2265710 + | Na+/H+-exchanging protein Synpcc7942_2187 2266102 - 2265698 - | hypothetical protein TERM 1274 2265761 - 2265775 + g 75 -11.4 -3.53761 | ACTCTGCTGGGAGCT CAGCCC GTT GGGCTG TTTGACCCAGGCTTG Synpcc7942_2188 2267534 - 2266131 - | isochorismate synthase TERM 1275 2267643 - 2267633 - g 86 -5.4 -5.29385 | opp_overlap 2267635 AATGCAACGAAAAAA CAGA GTG TCTG CTCTATTCGGCCTAG Synpcc7942_2189 2267619 - 2267882 + | hypothetical protein TERM 1276 2267961 - 2267948 - g 75 -2.4 -5.1101 | CCATGACCGAAAAAA TTCG GAAAAG CGAA GAAGAGTGGCGGGCC Synpcc7942_2190 2267935 - 2268357 + | methionine sulfoxide reductase B TERM 1277 2268375 - 2268408 + T 93 -6 -5.18726 | TGATTGCTCGCGATC GCCTTCTGGAGG GTTTGCATGA CCTCTGGAGGGC TTTTTGTTGTGCAGC Synpcc7942_2191 2269154 - 2268423 - | hypothetical protein TERM 1278 2270260 - 2270242 - g 71 -8.8 -3.85817 | opp_overlap 2270243 2270248, overlap 2270243 AGTCGGCTGGAGAAA GGCGATCG CAG CGATCGCG ATCAGCTGCCTTGGG TERM 1279 2270259 - 2270243 - g 73 -12.3 -2.91276 | opp_overlap 2270243 2270248, overlap 2270242 GTCGGCTGGAGAAAG GCGATCG CAG CGATCGC GATCAGCTGCCTTGG TERM 1280 2270448 - 2270464 + G 71 -7.3 -4.15508 | TCAATCTCTAGAACC TGATCAG TCA CTGGTCA TTTTGGCAATTGATT Synpcc7942_2192 2269294 - 2270901 + | diguanylate cyclase Synpcc7942_2193 2272655 - 2270973 - | metal dependent phosphohydrolase Synpcc7942_2194 2273002 - 2272634 - | hypothetical protein Synpcc7942_2195 2274900 - 2272975 - | putative adenylate/guanylate cyclase Synpcc7942_2196 2275545 - 2274904 - | hypothetical protein TERM 1281 2275834 - 2275882 + G 73 -12.4 -3.02144 | gap 2, overlap 2275785 TAGTCTCCTCGGGCG CGGTTGGGGTCGGTTGCACTCGCC TTG GGCT-GCGCGATCG-CCCCAGCCG TATTGCCCAACGTCA TERM 1282 2276710 - 2276669 - g 71 -11.7 -3.10715 | gap 1, opp_overlap 2276661 2276661, overlap 2276672 CCGAGGATTAGTCAA CTATGACAGTCACGAA-CTG CAG CAGATCCGTGGCTGTCAAAG TGATCAAATTGTTCA TERM 1283 2276707 - 2276672 - g 71 -12 -2.76442 | gap 1, opp_overlap 2276661 2276661, overlap 2276669 AGGATTAGTCAACTA TGACAGTCACGAA-CTG CAG CAGATCCGTGGCTGTCA AAGTGATCAAATTGT Synpcc7942_2197 2275683 - 2276786 + | gamma-glutamyl kinase Synpcc7942_2198 2276800 - 2277930 + | hypothetical protein Synpcc7942_2199 2280528 - 2277916 - | DNA polymerase III subunit alpha TERM 1284 2278328 - 2278346 + g 73 -8.9 -4.00532 | overlap 2278335 2278338 ACACCATTCTTCTTT GCACCTT CGACA AAGGTGC TTTGGTGTTTGACCA Synpcc7942_2200 2281077 - 2280586 - | hypothetical protein TERM 1285 2281167 - 2281147 - R 72 -7.6 -3.9941 | opp_overlap 2281142, overlap 2281142 GTCTGCATAACGAAA CTGCAATC TTTGC GATCGCAG ACTCGTCATCTAGGA TERM 1286 2281243 - 2281263 + r 70 -10.5 -2.72511 | opp_overlap 2281253, overlap 2281242 2281245 GCCGCGTACACGACT CGGCACATT AGC AATGTGCTG CTTTCGACCACTCAG alr 2282547 - 2281327 - | alanine racemase Synpcc7942_2202 2282672 - 2283169 + | HNH nuclease prfA 2284289 - 2283183 - | peptide chain release factor 1 TERM 1287 2283467 - 2283480 + g 72 -5.9 -4.42653 | overlap 2283468 2283471 CGCGCAAAATCTGCA TCGCG CGTT CGCGG TTTTGTAGCTGCGAT TERM 1288 2284373 - 2284351 - R 100 -17.8 -4.75288 | CCACACTAAAACAAA GGAAGCCCCA AAT TGGGGCTTCC CAGCACACGGACAGA rpmE 2284624 - 2284391 - | 50S ribosomal protein L31 rpsI 2285062 - 2284655 - | 30S ribosomal protein S9 rplM 2285517 - 2285062 - | 50S ribosomal protein L13 truA 2286417 - 2285533 - | tRNA pseudouridine synthase A rplQ 2286770 - 2286420 - | 50S ribosomal protein L17 Synpcc7942_2209 2287735 - 2286806 - | DNA-directed RNA polymerase subunit alpha TERM 1289 2286865 - 2286887 + g 76 -5.5 -4.80882 | GAGCTTCGACCACCT CTTCAGCCG ATTTC TGGCCGAAG TTTTTGATCTCCAGT TERM 1290 2287033 - 2287061 + g 79 -7.3 -4.57569 | GCGTGGGCTCAGGAT CGGCGGTGTGGGT ACT GCCAACACTGACG TTTTTCAACGGCTCG Synpcc7942_2210 2288173 - 2287781 - | 30S ribosomal protein S11 TERM 1291 2288068 - 2288082 + g 70 -10 -3.39784 | overlap 2288065 CACCGGCGGGGTCAG CGATCG AAA CGATCG TGTTATTGAAGGTGG TERM 1292 2288227 - 2288201 - R 100 -11.6 -4.70583 | CTGAGCAAGACAAAA TGCTGATGAACC CAA GGCTCAACAGCA GAGCGATTAAAGACC rpsM 2288620 - 2288243 - | 30S ribosomal protein S13 rpmJ 2288888 - 2288775 - | 50S ribosomal protein L36 adk 2289522 - 2288962 - | adenylate kinase secY 2290841 - 2289522 - | preprotein translocase subunit SecY TERM 1293 2290602 - 2290592 - G 71 -4.6 -4.66833 | overlap 2290593 2290600 TCCCAAGGGCAAAAA CGCC CAA AGCG GACAGACCACCCCCC TERM 1294 2290926 - 2290895 - R 86 -10.8 -3.94188 | overlap 2290902 AGCCAGCTTAAACAA CGGAAGAGGGGCAG GTGT CTGCCCCCATTCAG CATTGGCTTTTGGCA TERM 1295 2290919 - 2290902 - R 81 -12.7 -3.22938 | overlap 2290895 TTAAACAACGGAAGA GGGGCAG GTGT CTGCCCC CATTCAGCATTGGCT rplO 2291406 - 2290963 - | 50S ribosomal protein L15 rpsE 2291986 - 2291444 - | 30S ribosomal protein S5 TERM 1296 2291841 - 2291855 + g 79 -7.8 -4.58283 | CCGACGATCACGATC GCTCGG AAG CTGAGC TTTTTACCGCCCTTA TERM 1297 2291950 - 2291971 + g 71 -7.3 -4.19177 | overlap 2291917 2291954 GACGATTGTTGCGCC GACGGGAAG ACTG CTTCTTGTC TTTCTCTTCAGCCAT rplR 2292352 - 2291990 - | 50S ribosomal protein L18 rplF 2292891 - 2292352 - | 50S ribosomal protein L6 rpsH 2293329 - 2292928 - | 30S ribosomal protein S8 rplE 2293896 - 2293357 - | 50S ribosomal protein L5 TERM 1298 2293929 - 2293960 + r 81 -6.7 -4.66833 | gap 1, overlap 2293924 CTGGGCTGGGTCAGG GACTGG-GGAATCA GTCGA TGATTTCGCCGGTC TTTTTGAGCTTGCGC rplX 2294280 - 2293939 - | 50S ribosomal protein L24 rplN 2294645 - 2294280 - | 50S ribosomal protein L14 TERM 1299 2294430 - 2294446 + g 86 -2.1 -5.52384 | ACGGATGACATTGCC GCTATCG CGA CGCAAGC TTTTTTTGGTCCGCA rpsQ 2294905 - 2294657 - | 30S ribosomal protein S17 Synpcc7942_2224 2295134 - 2294940 - | 50S ribosomal protein L29 rplP 2295565 - 2295137 - | 50S ribosomal protein L16 rpsC 2296308 - 2295574 - | 30S ribosomal protein S3 TERM 1300 2296174 - 2296193 + g 95 -2.1 -5.86465 | overlap 2296176 AGCATTGCTCAGGTT TTTGCGA ACGTAG TCGCGGA TTTTTTTATCTTCTT rplV 2296686 - 2296333 - | 50S ribosomal protein L22 rpsS 2296980 - 2296705 - | 30S ribosomal protein S19 rplB 2297875 - 2297012 - | 50S ribosomal protein L2 rplW 2298207 - 2297905 - | 50S ribosomal protein L23 rplD 2298832 - 2298200 - | 50S ribosomal protein L4 TERM 1301 2298608 - 2298628 + g 93 -8.2 -5.27335 | AGACCGAATCGAACC GGCACGGG CGCGA CCCGTTCC TTTTTGTTTCCAAGG rplC 2299518 - 2298877 - | 50S ribosomal protein L3 TERM 1302 2299389 - 2299400 + g 72 -5.8 -4.3586 | opp_overlap 2299388 TGGCGTTGTAACCAT CCGT CGCC ACGG TTTTGATCTGAGTGA Synpcc7942_2233 2300113 - 2299796 - | hypothetical protein Synpcc7942_2234 2300183 - 2300659 + | NADH dehydrogenase I subunit N trmD 2300665 - 2301372 + | tRNA (guanine-N(1)-)-methyltransferase Synpcc7942_2236 2303044 - 2301380 - | ATPase Synpcc7942_2237 2303487 - 2303053 - | hypothetical protein TERM 1303 2303184 - 2303216 + g 71 -8.3 -3.8822 | opp_overlap 2303192 CCTGCGGTTGAATTG CTGCTAAAGCTGCCG CTT CGGCGACGCTAGCAG TTTGCATTTGCTCTG Synpcc7942_2238 2305044 - 2303629 - | glucose transport protein TERM 1304 2303954 - 2303940 - G 76 -5 -4.78764 | TAAATCCACCAAAAA TGAAGA GAA TCCTCA GCTCATGACTTTCTG TERM 1305 2304666 - 2304650 - G 70 -10.1 -3.52073 | TGGGCAATAGGATAA TCGGCCC CTA GGGCCAA GCCACTACAAAACAG TERM 1306 2305240 - 2305220 - R 72 -5.4 -4.55128 | overlap 2305215 AGGCCGAAAGTAAAA GCCCTAGA TTTTC TCCAGAGC TTTGAGCAACGGTTT Synpcc7942_2239 2305791 - 2305276 - | hypothetical protein Synpcc7942_2240 2305961 - 2306491 + | hypothetical protein Synpcc7942_2242 2308246 - 2307254 - | histidine kinase Synpcc7942_2241 2306546 - 2307418 + | hypothetical protein Synpcc7942_2243 2309497 - 2308253 - | glutamate-5-semialdehyde dehydrogenase ribH 2310333 - 2309788 - | riboflavin synthase subunit beta Synpcc7942_2245 2310531 - 2310343 - | photosystem II reaction center protein Z Synpcc7942_2246 2310738 - 2312300 + | hypothetical protein TERM 1307 2314847 - 2314830 - g 76 -7 -4.66163 | AGCCGCATTGAAAAA CACAGC CGCATT GCTGTG GGGTTACGGCGTGGC Synpcc7942_2247 2312310 - 2314958 + | DNA mismatch repair protein TERM 1308 2315240 - 2315226 - T 74 -10 -3.46102 | opp_overlap 2315232 TAGCCAAAAACGCAA CCCCAA TCC TTGGGG GATGTCCTCCTCACG TERM 1309 2315399 - 2315425 + T 100 -18.2 -4.75404 | opp_overlap 2315399 GATTCAGACAAAAAA GGGGAGAAATCA TGA TGATTTCTCCCC TTTTTAATACGGTTT TERM 1310 2315425 - 2315399 - T 100 -18.2 -5.38047 | opp_overlap 2315399 GATTCAGACAAAAAA GGGGAGAAATCA TGA TGATTTCTCCCC TTTTTAATACGGTTT Synpcc7942_2248 2315727 - 2315452 - | nucleoid protein Hbs TERM 1311 2315801 - 2315811 + r 72 -4.6 -4.64144 | AAGGCCTAAAGTCTT GCGG CGA CTGC TTTTTCAGGGTTCTT TERM 1312 2316029 - 2316003 - R 93 -10.9 -4.30719 | gap 1 GCTGCCCACAAGAAA CCCCTG-TGACC GCAA GGCCAGCAGGGG TCGTAGCCATGAATT Synpcc7942_2249 2316487 - 2316062 - | S-adenosylmethionine decarboxylase proenzyme TERM 1313 2316517 - 2316541 + r 74 -10.7 -3.16971 | opp_overlap 2316517 CTGTGCTAGTGAAAA GGCCTATTGGC AGG GCCAACAGGTC TTCGGTCTCTCATCA TERM 1314 2316541 - 2316517 - R 91 -10.7 -4.18018 | opp_overlap 2316517 CTGTGCTAGTGAAAA GGCCTATTGGC AGG GCCAACAGGTC TTCGGTCTCTCATCA recF 2318238 - 2317075 - | recombination protein F Synpcc7942_2251 2318919 - 2318335 - | hypothetical protein Synpcc7942_2252 2321980 - 2318927 - | phosphoenolpyruvate carboxylase TERM 1315 2320460 - 2320482 + g 71 -7.6 -4.16284 | TTCACAGATTTCGTT GATCGCGTCG GAA TGGCGCGAGC TTTCTTGGCGAATGT TERM 1316 2321871 - 2321861 - G 84 -6.8 -4.86621 | ATGGCGAAGGAAAAA CTCC AGC GGAG ACGACAGATCCAAAT Synpcc7942_2253 2323299 - 2322145 - | glutamate--cysteine ligase, putative Synpcc7942_2254 2324757 - 2323399 - | hypothetical protein TERM 1317 2324290 - 2324274 - G 88 -7.3 -5.0133 | overlap 2324276 GACTGTTCGAAAAAA CACCCAA GGT TTGGGTA AAGAAAGGACTTTCA TERM 1318 2324288 - 2324276 - G 71 -7.7 -4.13561 | overlap 2324274 CTGTTCGAAAAAACA CCCAA GGT TTGGG TAAAGAAAGGACTTT Synpcc7942_2255 2325520 - 2325924 + | hypothetical protein TERM 1319 2325956 - 2325981 + T 100 -10.5 -5.54894 | opp_overlap 2325956 AGAATGATGCACTAA TTCCCTGCTGA TTAT TCAGTGGGGAA TTTTTTTACTGAGTT Synpcc7942_2256 2326615 - 2326061 - | hypothetical protein Synpcc7942_2257 2326832 - 2326665 - | hypothetical protein avtA 2327013 - 2328296 + | valine--pyruvate transaminase rimM 2328300 - 2328848 + | 16S rRNA-processing protein Synpcc7942_2260 2329205 - 2328879 - | hypothetical protein Synpcc7942_2261 2329790 - 2329449 - | periplasmic divalent cation tolerance protein Synpcc7942_2262 2331196 - 2329787 - | hypothetical protein hisS 2332541 - 2331234 - | histidyl-tRNA synthetase TERM 1320 2332333 - 2332317 - G 70 -12.3 -2.72463 | ACGCAGCGTCAAGGA GCGATCG CCG CGATCGC GGAAACTGTACATCT Synpcc7942_2264 2332929 - 2332654 - | LuxR family transcriptional regulator Synpcc7942_2265 2333329 - 2334624 + | glutamate-5-semialdehyde dehydrogenase Synpcc7942_2266 2335718 - 2334654 - | periplasmic polyamine-binding protein of ABC transporter Synpcc7942_2267 2335846 - 2336103 + | hypothetical protein Synpcc7942_2268 2337217 - 2336072 - | hypothetical protein Synpcc7942_2269 2337944 - 2337207 - | hypothetical protein Synpcc7942_2270 2339007 - 2337973 - | glucanase Synpcc7942_2271 2339596 - 2339045 - | ADP-ribose pyrophosphatase Synpcc7942_2272 2340126 - 2339596 - | 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase Synpcc7942_2273 2340153 - 2340920 + | hypothetical protein TERM 1321 2342619 - 2342605 - g 74 -2.7 -5.00884 | opp_overlap 2342615, overlap 2342606 AGCGTCTGGAAAAAA TGCCC TGCGG GGGCG GGTCGCCGTTGGCTC Synpcc7942_2274 2340963 - 2342996 + | protoporphyrin IX magnesium-chelatase TERM 1322 2343026 - 2343057 + F 100 -11.8 -4.44667 | gap 1 AAACCTTGGCATCTA TCTGCTTGAGG-TGA GTC TCAGCTTCAAGCAGA TTTGTTATTGGGCCA Synpcc7942_2275 2343631 - 2343915 + | hypothetical protein Synpcc7942_2276 2344334 - 2343882 - | hypothetical protein Synpcc7942_2277 2344899 - 2344591 - | hypothetical protein Synpcc7942_2278 2345093 - 2347240 + | hypothetical protein Synpcc7942_2279 2347614 - 2349026 + | ammonium transporter Synpcc7942_2280 2350167 - 2349235 - | TPR repeat-containing protein TERM 1323 2350054 - 2350032 - G 80 -14.8 -2.55544 | opp_overlap 2350025, overlap 2350014 2350028 CGAGCAGGGAATCGA CCCACCGCTG GCG CTGCGGTGGG CGGGGCTGATTGAAG Synpcc7942_2282 2353015 - 2351102 - | GAF sensor signal transduction histidine kinase Synpcc7942_2281 2350198 - 2351154 + | hypothetical protein TERM 1324 2351262 - 2351282 + gF 71 -9 -3.44284 | gap 1 AGGCCACTGCCGCCC TGGCTGCGC CGTA GCGC-GCCA TCTTCTTGGTAGAAG TERM 1325 2351495 - 2351507 + gF 74 -4.8 -4.69053 | CCGCACCAGCGGCAA GCTG GCGGG CAGC TTTTGTTCGATGCTG TERM 1326 2352312 - 2352328 + gF 71 -7.3 -4.08958 | TGGCGCACCGCACTA CTGATCG TGT TGATCAG TTGTTCTTTGCGAGT TERM 1327 2353229 - 2353249 + G 79 -14.7 -2.74488 | overlap 2353222 ATCGCTATCGACAGC GCCTCACCC AAG GGGTGGGGC TGATTACCGTGATTG Synpcc7942_2283 2353111 - 2353854 + | hypothetical protein Synpcc7942_2284 2354772 - 2353861 - | 2-hydroxy-6-oxohepta-24-dienoate hydrolase TERM 1328 2354008 - 2353989 - G 71 -4.2 -4.57837 | opp_overlap 2353978, overlap 2353977 2353992 ACAGGCGCTGAAAAA CAGCAGCA TCTT TGGTGCCG AGGATCTGATCTTGG Synpcc7942_2285 2355848 - 2354769 - | glycerol dehydrogenase TERM 1329 2355208 - 2355194 - G 77 -7.8 -4.4078 | opp_overlap 2355194 2355196, overlap 2355195 CGCCTGCAAGTAAAA CGGTGG CTT CCACCA CTTCGTACCATTGCT Synpcc7942_2286 2357059 - 2355974 - | hypothetical protein TERM 1330 2356871 - 2356859 - G 71 -4.8 -4.55689 | overlap 2356861 2356862 ATGATCCAGACAAAA GAGC CCCAC GCTC TGCTGGGGGTTAGCA Synpcc7942_2287 2358120 - 2357146 - | hypothetical protein Synpcc7942_2288 2358698 - 2358162 - | phosphatase kdsC Synpcc7942_2289 2359549 - 2358695 - | 2-dehydro-3-deoxyphosphooctonate aldolase TERM 1331 2359337 - 2359357 + g 71 -9 -3.85698 | opp_overlap 2359337 ATAGCCTCGGAAGGA GCCGATCG AGGTG CGATTGGC TTTGTCAAAAGAGGA Synpcc7942_2290 2360265 - 2359531 - | 3-deoxy-manno-octulosonate cytidylyltransferase Synpcc7942_2291 2361251 - 2360280 - | KpsF/GutQ family protein TERM 1332 2363093 - 2363107 + G 72 -10 -3.55122 | CTCAACTGGCAAGGC CGATCG CGG CGATCG TTGATTTGGCTGCTG Synpcc7942_2292 2361401 - 2363665 + | hypothetical protein Synpcc7942_2293 2363670 - 2364119 + | hypothetical protein Synpcc7942_2294 2364152 - 2364988 + | hypothetical protein Synpcc7942_2295 2364988 - 2366091 + | hypothetical protein Synpcc7942_2296 2367376 - 2366072 - | L-glutamine synthetase Synpcc7942_2297 2368721 - 2367528 - | transaldolase/EF-hand domain-containing protein TERM 1333 2369085 - 2369066 - g 72 -10 -3.67976 | overlap 2369068 GCTACGAAGTGCAAA CACCAGCG CGAT CGCTGGTA GAGCTGCCTGCCGCT TERM 1334 2369083 - 2369068 - g 72 -10.4 -3.41936 | overlap 2369066 TACGAAGTGCAAACA CCAGCG CGAT CGCTGG TAGAGCTGCCTGCCG ruvA 2368966 - 2369589 + | Holliday junction DNA helicase motor protein rpsO 2369635 - 2369904 + | 30S ribosomal protein S15 Synpcc7942_2300 2369910 - 2370404 + | hypothetical protein TERM 1335 2370476 - 2370496 + F 95 -9 -4.8622 | GAGATCTGCGTTGAA GCCAATCC AAGTC GGGTTGGC TTTTTGCTTGGGGAA Synpcc7942_2301 2370542 - 2370814 + | hypothetical protein Synpcc7942_2302 2371247 - 2370891 - | hypothetical protein TERM 1336 2371172 - 2371187 + g 83 -9 -4.64598 | opp_overlap 2371164 GGTAAACCGAGGCAC GCGATC GATT GATCGC TTTTTGCACTGCTTC Synpcc7942_2303 2371417 - 2372253 + | dihydropteroate synthase ppnK 2372353 - 2373270 + | inorganic polyphosphate/ATP-NAD kinase Synpcc7942_2305 2373315 - 2374001 + | two component transcriptional regulator Synpcc7942_2306 2374134 - 2374721 + | heat shock protein DnaJ-like TERM 1337 2375310 - 2375288 - g 88 -4.8 -5.43974 | overlap 2375291 2375293 AAAATCAAATAAAAA CAAGTCAAGA CAA TCTTGGCTAG AGGCTGTTGGTGACA TERM 1338 2375307 - 2375291 - g 76 -5.1 -4.74052 | overlap 2375288 2375293 ATCAAATAAAAACAA GTCAAGA CAA TCTTGGC TAGAGGCTGTTGGTG Synpcc7942_2307 2374725 - 2375735 + | hypothetical protein gcvT 2375865 - 2376983 + | glycine cleavage system aminomethyltransferase T TERM 1339 2377055 - 2377033 - T 100 -14.2 -4.68724 | CCATCTAACAGAAAA GGAGCCCAAG TCA CTTGAGCTCC ATACACTTGCCTTAG Synpcc7942_2309 2377703 - 2377107 - | thioredoxin peroxidase Synpcc7942_2310 2379247 - 2377778 - | L-2,4-diaminobutyrate decarboxylase TERM 1340 2379227 - 2379216 - G 86 -7.2 -5.00616 | TCCGGGCGCAAAAAA GCCG TTTC CGGC AAAGGCGCAGAAGAA TERM 1341 2379339 - 2379304 - R 74 -2.4 -5.03145 | opp_overlap 2379335, overlap 2379307 CAAGCTGCCAAAAAA GAAGCGTCGGCAGA GAATCAGA TCGGCCACCGCTGC AAAGACAGCTTCATG TERM 1342 2379422 - 2379449 + r 90 -9.9 -4.37092 | opp_overlap 2379422 CTGCTCAAGCAAAAA GCCTGTCCAAG ACAATG CTTAGACAGGC TTTTGTGCGACGGGT TERM 1343 2379449 - 2379422 - R 100 -12.1 -4.8622 | opp_overlap 2379422 CTGCTCAAGCAAAAA GCCTGTCCAAG ACAATG CTTAGACAGGC TTTTGTGCGACGGGT Synpcc7942_2311 2380381 - 2379602 - | hypothetical protein TERM 1344 2379671 - 2379652 - G 74 -11.4 -3.35679 | GGCGCTCACTGACAA CCGTCAGG CCAT CCCGACGG ACGACCAAAGCTGAA Synpcc7942_2312 2380457 - 2381530 + | UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase TERM 1345 2381566 - 2381543 - T 100 -13.2 -5.4588 | TAAAACCACAAAAAA CTCCCCAGAG CGAA CTCTGAGGAG CGATCGCGAGCGGAG TERM 1346 2381573 - 2381596 + T 87 -13.8 -3.04144 | TCTGAGGAGCGATCG CGAGCGGAGG AAAA CCTCCGCCCG TCTTAAAACTGGGGA TERM 1347 2381638 - 2381658 + T 90 -4.6 -5.33026 | gap 1 GAAGTCGCCCATGCC GCCGCCAGC ACCA GCCGG-GGC TTTTTCTTTCGGTTC groEL 2383248 - 2381614 - | chaperonin GroEL TERM 1348 2382680 - 2382708 + g 80 -11 -3.85389 | TCGAAACGCATCCCT TCGGTGACCTCC AGTTC GGTGGTCATCGA TTTGCCTTCTTCCAG TERM 1349 2382925 - 2382912 - G 77 -8.1 -4.25104 | CGCGCTTCAGCAAAA TGGCG TTAG CGCCA GCAGCCACGTTACGC groES 2383607 - 2383296 - | co-chaperonin GroES TERM 1350 2383578 - 2383556 - G 83 -7.7 -4.84359 | gap 1 CGACTTTCACAAAAA CGCGATCGCC CAGG GGCG-TCACG GTCGAAACACTCAGA Synpcc7942_2315 2383870 - 2385324 + | F0F1 ATP synthase subunit beta TERM 1351 2385339 - 2385364 + F 93 -14.7 -3.05877 | overlap 2385336 GGTTTGGCTGACTTT GGTGGGGTTGC GATC GCAGCCCCGCC TCCTGTTTTTGTCCC atpC 2385395 - 2385808 + | F0F1 ATP synthase subunit epsilon TERM 1352 2385894 - 2385918 + T 93 -10 -4.48987 | opp_overlap 2385894, overlap 2385889 TTACTGCGTCTAAAA CCGCTGGTTC CCAGA GAGCTAGCGG TTTTCCTTATGGAGC Synpcc7942_2317 2388576 - 2386204 - | heavy metal translocating P-type ATPase TERM 1353 2388013 - 2387990 - G 93 -5.2 -5.52384 | gap 1, overlap 2387992 GGCTCATCAAAAAAA CAGACC-CAGC CTA GCTGCGGCCAG AGCAACGCCACCAAA TERM 1354 2388011 - 2387992 - G 72 -6.4 -4.40552 | gap 1, overlap 2387990 CTCATCAAAAAAACA GACC-CAGC CTA GCTGCGGCC AGAGCAACGCCACCA TERM 1355 2388158 - 2388120 - G 73 -8.1 -4.07687 | gap 1 AGCCCGCTTGCAAAA TGCT-GCGTCCCGGCCCT AGCA AGGCCCAAGTCGCCAGCA ACGCGTGAAACCACA Synpcc7942_2318 2388749 - 2389375 + | hypothetical protein Synpcc7942_2319 2389409 - 2389627 + | XRE family plasmid maintenance system antidote protein Synpcc7942_2320 2389796 - 2390083 + | hypothetical protein TERM 1356 2390444 - 2390434 - g 71 -6.8 -4.19506 | ATCTGAATCCGAAAA TGCC GCA GGCA CTCAACAATATTGCG Synpcc7942_2321 2390121 - 2390642 + | photosystem I assembly protein Ycf3 Synpcc7942_2322 2390654 - 2390944 + | aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C TERM 1357 2390978 - 2391004 + F 79 -3.7 -5.10933 | gap 1, opp_overlap 2390978 TTCACCCCCAAACAG CCCCTGTTAATC GCGC GATCG-CAGGGG TTTTGTTTTGCATCG Synpcc7942_2323 2391109 - 2391372 + | glutaredoxin GrxC TERM 1358 2391731 - 2391719 - g 71 -4.8 -4.62069 | GGTCGACCCGAAAAA GACC CGTGT GGTC AATTCGCCGGAAGGA Synpcc7942_2324 2391369 - 2392340 + | glutathione synthetase Synpcc7942_2325 2393094 - 2392327 - | HEAT repeat-containing PBS lyase Synpcc7942_2326 2393509 - 2394261 + | hypothetical protein Synpcc7942_2327 2394768 - 2394295 - | hypothetical protein TERM 1359 2395697 - 2395710 + G 77 -8.1 -4.25283 | CTCCAGGACTGGACC GCAGC ATTG GCTGC TTTTGATCAGGCGAT Synpcc7942_2328 2394836 - 2395927 + | TPR repeat-containing protein Synpcc7942_2329 2397198 - 2395924 - | metal dependent phosphohydrolase Synpcc7942_2330 2398414 - 2397191 - | C-terminal processing peptidase-2 TERM 1360 2398105 - 2398077 - G 72 -9.5 -3.61536 | overlap 2398078 AAGCCAATCTGCAAA CCGACGCCCGATA GCT CACCGGCCGTCGA GACTTGGAGGTTGCG Synpcc7942_2331 2398625 - 2399272 + | cytochrome b6 TERM 1361 2399293 - 2399317 + F 74 -7.8 -4.04719 | AACAAGCTTGGGTTT GGCGCTGGTT AAAAC GGTCAGCGCC TTTCTCCTCTCTACT Synpcc7942_2332 2399369 - 2399851 + | cytochrome b6-f complex subunit IV TERM 1362 2399909 - 2399888 - T 90 -10.1 -4.3586 | opp_overlap 2399889, overlap 2399889 TCACTGACAGTAAAA GGGGGTCTG CAAG CAGACCCCT TTTTTGTGGTGCTGC TERM 1363 2399908 - 2399889 - T 89 -13.6 -3.21034 | opp_overlap 2399889, overlap 2399888 CACTGACAGTAAAAG GGGGTCTG CAAG CAGACCCC TTTTTTGTGGTGCTG TERM 1364 2399889 - 2399908 + T 100 -13.6 -5.32882 | opp_overlap 2399889 2399888 CACTGACAGTAAAAG GGGGTCTG CAAG CAGACCCC TTTTTTGTGGTGCTG Synpcc7942_2333 2401299 - 2399962 - | opcA protein TERM 1365 2401245 - 2401263 + g 82 -8.1 -4.56597 | overlap 2401244 ATTCTTCAATTTCAG CCAGCGC GATTG GCGTTGG TTTTTGGAGCGAAAG Synpcc7942_2334 2402874 - 2401339 - | glucose-6-phosphate 1-dehydrogenase TERM 1366 2401435 - 2401425 - G 72 -2.4 -4.85782 | overlap 2401426 2401427 CTTCGTAAAAAGAAA TGCC AGC GGCT TGGCGCGGGTCATCC Synpcc7942_2335 2403955 - 2402921 - | fructose-1,6-bisphosphatase TERM 1367 2403385 - 2403373 - G 74 -3.3 -4.91109 | GGTCCAGTACAAAAA CATGG ACG CCCTG ACCCATGCTGTAGAC Synpcc7942_2336 2404389 - 2404216 - | hypothetical protein Synpcc7942_2337 2405550 - 2404597 - | N-acetylmuramoyl-L-alanine amidase Synpcc7942_2338 2405849 - 2406766 + | hypothetical protein Synpcc7942_2339 2406813 - 2407847 + | bifunctional ADP-heptose synthase TERM 1368 2408131 - 2408142 + G 74 -7.2 -4.3129 | opp_overlap 2408131, overlap 2408130 TAGCACTAGCAGAAG CGGC TCTC GCCG TTTTAGTCGTCGATG engA 2407881 - 2409242 + | GTP-binding protein EngA Synpcc7942_2341 2409252 - 2410133 + | cobalt transport system permease protein TERM 1369 2410434 - 2410413 - T 100 -10.1 -5.53288 | CGCAACGCAAAAAAA CGAGCCCCC AAAT GAGGACTCG CTGCATCTTGTAAGG TERM 1370 2410504 - 2410494 - T 72 -8.2 -3.76402 | opp_overlap 2410494 2410493 AGTGCACCGACCAAA CGCC AGC GGCG ATTTTGACCAGAGGT Synpcc7942_2342 2410977 - 2410477 - | photosystem I reaction center protein subunit XI psaI 2411139 - 2411023 - | photosystem I reaction center subunit VIII Synpcc7942_2344 2411499 - 2412449 + | hypothetical protein TERM 1371 2412496 - 2412465 - T 81 -13.1 -2.73483 | opp_overlap 2412452 2412461 2412485 2412487, overlap 2412485 2412489 AGGCTATGGCAACCA CCGCTGGATTTCT CAAGCC AGAGATCCAGCGG CTAGATCATCTTCTC TERM 1372 2412559 - 2412533 - T 100 -17.4 -4.72272 | opp_overlap 2412533 CGCTTCCAGCAAAAA GGGTCCTGAATC AGC GATCCAGGACCC TTTCAATTCATTACA TERM 1373 2412533 - 2412559 + T 100 -15.2 -3.81027 | opp_overlap 2412533 CGCTTCCAGCAAAAA GGGTCCTGAATC AGC GATCCAGGACCC TTTCAATTCATTACA Synpcc7942_2345 2412926 - 2412588 - | hypothetical protein TERM 1374 2413610 - 2413622 + G 77 -3.3 -5.0538 | overlap 2413604 2413608 CGCCTTGGACTACGA GACGA TCG TCGCC TTTTTTCAAGTGCGC Synpcc7942_2346 2413356 - 2414141 + | HAD family hydrolase Synpcc7942_2347 2415214 - 2414138 - | hypothetical protein TERM 1375 2414536 - 2414546 + g 71 -8.2 -3.97368 | CCAGCAACACACTGA GGCG ATT CGCC TTTCTGGATTGGGGA queA 2415233 - 2416312 + | S-adenosylmethionine:tRNA ribosyltransferase-isomerase Synpcc7942_2349 2416387 - 2417580 + | twitching motility protein Synpcc7942_2350 2418294 - 2417593 - | translation factor SUA5 TERM 1376 2417937 - 2417949 + g 74 -10.5 -3.67976 | opp_overlap 2417936 TGGGAATGCGAATAC CGGCG GTC CGCCG TTTGGGATTCATGAC Synpcc7942_2351 2418310 - 2419518 + | hypothetical protein TERM 1377 2419533 - 2419512 - T 100 -14.5 -4.90079 | opp_overlap 2419509 ATGGCAACAAGAAAA CGCCTGACA GAAC TGTCAGGCG CAGATTGTCGGAGAG Synpcc7942_2352 2420198 - 2419575 - | sigma 54 modulation protein / SSU ribosomal protein S30P lipB 2420404 - 2421105 + | lipoyltransferase TERM 1378 2421157 - 2421127 - T 91 -7.7 -5.10461 | gap 1, opp_overlap 2421127 CCTATCCAACAAAAA CTGCTGAC-CTGAA AGAT TCCAGTATCAGCAG TTCGTTAGCGGCCGA Synpcc7942_2354 2421726 - 2421202 - | peptidylprolyl isomerase Synpcc7942_2355 2422102 - 2421779 - | hypothetical protein Synpcc7942_2356 2422819 - 2422193 - | Crp/FNR family transcriptional regulator Synpcc7942_2357 2424446 - 2423001 - | hypothetical protein TERM 1379 2423086 - 2423070 - G 70 -12.3 -2.612 | overlap 2423069 AGAGAAATGACTAAC GCGATCG ATG CGATCGC CGAAGGTTGACCGGA Synpcc7942_2358 2424522 - 2425352 + | nitrilase-like TERM 1380 2426605 - 2426618 + G 71 -4.5 -4.57569 | overlap 2426606 GATGATTCCGCGCGG TGAGG TCGG CCTCG TTTTTGCAGGGGTGG Synpcc7942_2359 2425391 - 2426773 + | Na+/H+ antiporter Synpcc7942_2360 2426823 - 2427857 + | N-acetylmuramoyl-L-alanine amidase Synpcc7942_2361 2427870 - 2428739 + | glutamate racemase TERM 1381 2428774 - 2428763 - f 81 -4.4 -5.07567 | CCAGATTGTAAAAAA TCGT AACG ACGA CGCCGCCCATGACTT Synpcc7942_2362 2428783 - 2429754 + | trans-hexaprenyltranstransferase Synpcc7942_2363 2430142 - 2429771 - | hypothetical protein Synpcc7942_2364 2430767 - 2430162 - | hypothetical protein TERM 1382 2432067 - 2432078 + G 74 -4.4 -4.72846 | ACGGCATCCCTTGCT TCTC ACCC GAGA TTTTTGCCTATCTGC prfC 2430839 - 2432509 + | peptide chain release factor 3 Synpcc7942_2366 2432879 - 2432601 - | hypothetical protein Synpcc7942_2367 2433454 - 2432951 - | hypothetical protein Synpcc7942_2368 2433890 - 2435020 + | secretion protein HlyD TERM 1383 2435478 - 2435493 + G 71 -9 -3.73968 | GTTCTATACGTTTTC TTCGCC TACA GGCGAA TTTGATGCCCAGTTT Synpcc7942_2369 2435041 - 2438211 + | hydrophobe/amphiphile efflux-1 HAE1 Synpcc7942_2370 2438232 - 2438441 + | hypothetical protein Synpcc7942_2371 2439246 - 2438452 - | UDP-N-acetylglucosamine acyltransferase TERM 1384 2438823 - 2438812 - G 71 -7.2 -4.15044 | GTTGCCGCTAATAAA GGCG CGAT CGCC GACTTGGGCATAGCC Synpcc7942_2372 2440336 - 2439287 - | hypothetical protein Synpcc7942_2373 2441373 - 2440339 - | hypothetical protein TERM 1385 2441407 - 2441421 + H 77 -7.2 -4.49556 | overlap 2441394 GGGGTCGAAAGGTGA CCTTTA GAA TAAAGG TTTGTTTCCTGCGGC Synpcc7942_2374 2441447 - 2442805 + | tRNA-i(6)A37 thiotransferase enzyme MiaB TERM 1386 2443687 - 2443723 + G 86 -3.6 -5.4833 | TCGCGATCGCCGCCT TCCAAGCCGTCGATGC ATCTG GCCTCAGTCGCTTGGA TTTTTTCTTGGATAG ddl 2442837 - 2443880 + | D-alanyl-alanine synthetase A Synpcc7942_2376 2443884 - 2444294 + | hypothetical protein Synpcc7942_2377 2444319 - 2445167 + | cell division protein FtsQ Synpcc7942_2378 2445387 - 2446568 + | cell division protein FtsZ TERM 1387 2447327 - 2447340 + G 79 -3.7 -5.0809 | opp_overlap 2447324 2447327 2447328, overlap 2447328 ATCGGTCAAGGACAA GGCCC GCTT GGGCA TTTTTATCCTTTGTT Synpcc7942_2379 2446568 - 2447359 + | phosphomethylpyrimidine kinase Synpcc7942_2380 2447772 - 2447344 - | hypothetical protein TERM 1388 2448300 - 2448330 + G 72 -2.4 -4.91109 | overlap 2448302 CGTGCAGCGTGGTTG CCGCAATGCCCTGA TCG TCAGCGACTTGCCG TTTTTGTCCTACCAA panB 2448076 - 2448882 + | 3-methyl-2-oxobutanoate hydroxymethyltransferase Synpcc7942_2382 2450069 - 2448879 - | coproporphyrinogen III oxidase Synpcc7942_2383 2450109 - 2451260 + | nucleotide binding protein, PINc TERM 1389 2453799 - 2453819 + G 77 -9.7 -3.92659 | CACAAAATTGGCCAG CAGCAGTTG CAG CAACCGCTG TTTGAATTTTCGGGC Synpcc7942_2384 2451384 - 2454974 + | pyruvate:ferredoxin (flavodoxin) oxidoreductase TERM 1390 2455201 - 2455239 + G 72 -10.3 -3.48395 | gap 2 AGAATCCCTGACCTA TGCGCCGGAGCCCGCTTGG TTC CCGATCGGGC-C-GGTGCA TTATCTCCGGCAGAT Synpcc7942_2385 2454974 - 2455996 + | dihydroorotate dehydrogenase 2 Synpcc7942_2386 2455998 - 2457101 + | hydrogenase expression/formation protein HypD Synpcc7942_2387 2459118 - 2457103 - | hypothetical protein TERM 1391 2458533 - 2458564 + g 71 -8.2 -4.02719 | gap 1, opp_overlap 2458532 2458530 2458533 CATAATCAAATAGAG TCTTGTTC-ATACGA ATC TCGTAGCGAACAAGA TTTCCTCTTTGATCC Synpcc7942_2388 2460331 - 2459162 - | oxalate decarboxylase Synpcc7942_2389 2461401 - 2460601 - | heat shock protein DnaJ-like TERM 1392 2461289 - 2461269 - G 70 -11.1 -3.02263 | AGACTGCCCGCAACA GCGATCGCA AAT CGCGACCGC GCTCCTGTTCTTGGC TERM 1393 2464453 - 2464463 + G 70 -3.2 -4.74453 | overlap 2464437 GATCGCCCGTGCCGT CGTG CTC TACG TTTTTCGCTGTCTTG Synpcc7942_2390 2461433 - 2465122 + | 5-oxoprolinase (ATP-hydrolyzing) Synpcc7942_2391 2465228 - 2465848 + | oxidoreductase-like TERM 1394 2467252 - 2467218 - g 71 -7.3 -4.03234 | gap 1, opp_overlap 2467205, overlap 2467221 2467248 GGGCCTTCAGAGAAA GAAGGCTTATATTCCT TTCC AGGTA-ATAAGCCTCC GGAAAAAGAGGTTTT Synpcc7942_2392 2466045 - 2467505 + | hypothetical protein Synpcc7942_2394 2470835 - 2469054 - | Na+/H+ antiporter gltX 2467688 - 2469133 + | glutamyl-tRNA synthetase TERM 1395 2469764 - 2469723 - GT 75 -5.1 -4.66264 | gap 1 CAAAATCGTTAAAAA GACCTGCGCCTTAATCGCTG CGC CACCGGCTAAGCCGC-GATC GGTCAGTAGAATCGC Synpcc7942_2395 2471140 - 2470889 - | hypothetical protein TERM 1396 2471289 - 2471263 - R 100 -15.2 -4.07687 | opp_overlap 2471262 2471261 2471263 2471265 AGCTCGCTGTTAAAA GAGGTGCTGCCC TAG GGACAACACCTC GGTTTCTTATCGGTT Synpcc7942_2396 2471930 - 2471379 - | HAD family phosphatase TERM 1397 2471861 - 2471835 - G 70 -10 -3.38786 | GACATCCAAGATCAA CCCCTGCAGACC TGC GGCCAGCAGCGG CTCAGCCTGCAACTG Synpcc7942_2397 2472461 - 2471934 - | hypothetical protein TERM 1398 2472506 - 2472488 - R 77 -11.6 -3.18274 | opp_overlap 2472474 TTGAGTGGAACCGAA GCGGCGGG GCT CCCGCTGC TCGTCCAACCATTGT Synpcc7942_2398 2472916 - 2472467 - | Holliday junction resolvase-like protein Synpcc7942_2399 2474101 - 2472923 - | hypothetical protein Synpcc7942_2400 2475316 - 2474159 - | hypothetical protein TERM 1399 2475413 - 2475389 - R 100 -15.1 -5.9003 | AAACCAACAAAAAAA CTGGGGCTTTA ACC CAAAGCCCCAG AAGATGACGAATTGC Synpcc7942_2401 2475940 - 2475449 - | heat shock protein Hsp20 TERM 1400 2477018 - 2477046 + G 74 -10.9 -3.55563 | opp_overlap 2477005 2477020, overlap 2477021 AACGATCCGGCAGAT GAGGCGGCGATCG CGG CAATCGCCGCTGC TTTCCCCGATCGCCT TERM 1401 2477044 - 2477020 - g 70 -12.1 -2.62616 | opp_overlap 2477018 2477021, overlap 2477005 CGATCCGGCAGATGA GGCGGCGATCG CGG CAATCGCCGCT GCTTTCCCCGATCGC TERM 1402 2477021 - 2477043 + G 77 -13.4 -2.91144 | opp_overlap 2477020 2477005, overlap 2477018 GATCCGGCAGATGAG GCGGCGATCG CGG CAATCGCCGC TGCTTTCCCCGATCG Synpcc7942_2402 2476025 - 2477155 + | hypothetical protein Synpcc7942_2403 2477464 - 2477748 + | hypothetical protein TERM 1403 2478513 - 2478500 - g 75 -2.3 -5.09426 | opp_overlap 2478504, overlap 2478490 2478502 2478503 CTGAAGCTGAAAAAA CAGCG ACAT CCCTG CCGGGATAGCTCAGT Synpcc7942_2404 2477807 - 2478547 + | hypothetical protein Synpcc7942_2405 2478993 - 2478739 - | hypothetical protein Synpcc7942_2406 2479051 - 2480190 + | FAD dependent oxidoreductase TERM 1404 2480641 - 2480625 - gT 78 -8.7 -4.15044 | TTGCCGCCGAAGAAA CGGTACA GGC TGCACCG CTACCACCCATCAAA Synpcc7942_2407 2480159 - 2480938 + | hypothetical protein TERM 1405 2480986 - 2480953 - T 100 -7.4 -5.4588 | GAAAATGACAAAAAA CCCCTCAGGCCATT GCGTTA AGCAACCTGAGGGG CTGTGGGAATTGATG Synpcc7942_2408 2481395 - 2481009 - | hypothetical protein Synpcc7942_2409 2482805 - 2481471 - | adenylosuccinate synthetase TERM 1406 2482723 - 2482750 + g 74 -7 -4.35926 | gap 1, opp_overlap 2482723, overlap 2482725 2482727 TAGCGGACAACGACA TCTGCTGACCGGC TGA GCAGGTCAGT-GA TTTTGCCTTTGCCCT TERM 1407 2482727 - 2482747 + g 71 -11.1 -3.16093 | opp_overlap 2482723, overlap 2482725 2482723 GGACAACGACATCTG CTGACCGGC TGA GCAGGTCAG TGATTTTGCCTTTGC Synpcc7942_2410 2482991 - 2484025 + | adenosine deaminase Synpcc7942_2411 2484137 - 2484421 + | hypothetical protein Synpcc7942_2412 2485251 - 2484439 - | SPFH domain-containing protein/band 7 family protein Synpcc7942_2413 2485527 - 2485279 - | hypothetical protein TERM 1408 2485592 - 2485555 - R 100 -14.9 -4.07885 | gap 1, overlap 2485556 TATTTCGTTGTAAAA GCCTGCTGCGATCGCTCC TCT GTGGCGATCGCAGCA-GC GATTAGGCGATCGGC TERM 1409 2485592 - 2485556 - R 93 -15.1 -3.04517 | overlap 2485555 ATTTCGTTGTAAAAG CCTGCTGCGATCGCTCC TCT GTGGCGATCGCAGCAGC GATTAGGCGATCGGC Synpcc7942_2414 2486650 - 2485595 - | hypothetical protein TERM 1410 2486845 - 2486810 - R 83 -13.2 -3.03159 | overlap 2486776 2486815 CTAACGGCGCTAAGA CTCAACCTTGGGGCGC GATC GCACCCCGAGGCTGTG ACTGGCAAATTTAGG TERM 1411 2486840 - 2486815 - R 81 -12.5 -3.1855 | overlap 2486776 2486810 GGCGCTAAGACTCAA CCTTGGGGCGC GATC GCACCCCGAGG CTGTGACTGGCAAAT lysS 2488370 - 2486856 - | lysyl-tRNA synthetase Synpcc7942_2416 2489207 - 2488440 - | two component transcriptional regulator Synpcc7942_2417 2490579 - 2489314 - | transcriptional regulator, ABC transporter Synpcc7942_2418 2491517 - 2490633 - | transcriptional regulator Synpcc7942_2419 2491630 - 2492154 + | hypothetical protein Synpcc7942_2420 2492215 - 2492949 + | serine O-acetyltransferase TERM 1412 2492986 - 2493002 + T 78 -7.9 -4.30978 | overlap 2492988 TCAGGATTATCAGGA CTCCTGC GGA GCAGGTG TTTTGGTGGGTTGGG TERM 1413 2492988 - 2493000 + T 76 -9.1 -3.75571 | overlap 2492986 AGGATTATCAGGACT CCTGC GGA GCAGG TGTTTTGGTGGGTTG Synpcc7942_2421 2493897 - 2492980 - | high-affinity iron transporter TERM 1414 2493354 - 2493338 - G 75 -2.1 -5.06103 | ATAACTTGGAAAAAA CGCCGCA GAT TGAGCCG GATGCTGCCTCGAAA TERM 1415 2493696 - 2493682 - G 70 -5.6 -4.37502 | AGGAGCATAGTAAAA CTGCGC GGC GCTCAG CGTTCCGAGGGCATT Synpcc7942_2422 2494844 - 2493978 - | hypothetical protein Synpcc7942_2423 2496775 - 2494868 - | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA TERM 1416 2495239 - 2495260 + g 71 -8.1 -3.91798 | gap 1, opp_overlap 2495239, overlap 2495239 TCGGACGCCGCAACA GG-TCAGCTA AGG TAGCTGAGCC TTTGATTGGGGCTTG TERM 1417 2496167 - 2496177 + g 73 -8.2 -4.08767 | CTTATCGACGCGGGC CGGG GTT CCCG TTTTGAGGCGATCGG Synpcc7942_2424 2497627 - 2496824 - | hypothetical protein TERM 1418 2497189 - 2497178 - G 72 -3.6 -4.7497 | TTGATTGAGCAAAAA GGCG ACTG CACC GAACACGAGCGCGAT Synpcc7942_2425 2498661 - 2497699 - | chaperon-like protein for quinone binding in photosystem II TERM 1419 2498753 - 2498733 - R 83 -9.7 -4.04318 | CCCACACAGCAGAAA GCCCCTC TGATTAG GAGGGGC CGGCCTCAGCTTAGG petM 2498893 - 2498780 - | cytochrome b6-f complex subunit PetM Synpcc7942_2427 2498972 - 2499814 + | 3-mercaptopyruvate sulfurtransferase Synpcc7942_2428 2500244 - 2499798 - | biopolymer transport ExbD like protein Synpcc7942_2429 2500928 - 2500278 - | biopolymer transport ExbB like protein Synpcc7942_2430 2502112 - 2500967 - | N(2),N(2)-dimethylguanosine tRNA methyltransferase TERM 1420 2502065 - 2502054 - G 91 -5.8 -5.42259 | TGAGGGCGAAAAAAA GCAG TTTT CTGC TGAAATCGTGCAGCA Synpcc7942_2431 2505955 - 2502146 - | hypothetical protein Synpcc7942_2432 2506121 - 2506729 + | hypothetical protein TERM 1421 2507022 - 2507032 + G 71 -6.8 -4.25848 | overlap 2507019 2507019 CCAGCAGTTTGTGGG CAGC GCC GCTG TTTTAATCGGCAATT Synpcc7942_2433 2506726 - 2507646 + | hypothetical protein ilvH 2507663 - 2508181 + | acetolactate synthase 3 regulatory subunit Synpcc7942_2435 2508185 - 2508805 + | hypothetical protein Synpcc7942_2436 2509445 - 2508849 - | peptide methionine sulfoxide reductase ileS 2512368 - 2509504 - | isoleucyl-tRNA synthetase Synpcc7942_2438 2513873 - 2512440 - | CheA signal transduction histidine kinase TERM 1422 2514509 - 2514525 + G 79 -9.5 -4.09685 | overlap 2514494 TGTGGCTCACGCCAG TCGCATT CTG AATGCGA TTTTGGGACATGGCA Synpcc7942_2439 2514276 - 2515271 + | beta-carotene hydroxylase TERM 1423 2515302 - 2515322 + T 100 -11.1 -5.56673 | TGATGACTCGTTCAA CCCGGTCCT GGT AGGGCTGGG TTTTTTCTTATAGGT TERM 1424 2515496 - 2515446 - T 91 -10.7 -4.29432 | gap 1, opp_overlap 2515456 2515459, overlap 2515456 CAAAGCTCACGAAAA TTCGAACTAACAAGCGGTACGAGA CGAA TCCCCTACCGCTTGTTATCT-GAA AGCTTGAAAGAGCCT TERM 1425 2515487 - 2515456 - T 95 -13.8 -3.40141 | opp_overlap 2515456 2515459, overlap 2515446 GAAAATTCGAACTAA CAAGCGGTACGAGA CGAA TCCCCTACCGCTTG TTATCTGAAAGCTTG TERM 1426 2515456 - 2515487 + T 82 -11.6 -3.494 | opp_overlap 2515456 2515446, overlap 2515459 GAAAATTCGAACTAA CAAGCGGTACGAGA CGAA TCCCCTACCGCTTG TTATCTGAAAGCTTG TERM 1427 2515459 - 2515484 + T 72 -7.5 -3.88232 | opp_overlap 2515456 2515446, overlap 2515456 AATTCGAACTAACAA GCGGTACGAGA CGAA TCCCCTACCGC TTGTTATCTGAAAGC Synpcc7942_2440 2517694 - 2515544 - | polynucleotide phosphorylase/polyadenylase TERM 1428 2516279 - 2516291 + g 78 -6.2 -4.72272 | overlap 2516253 CAGCCCCATGGCTGC GCCG CTGAC CGGC TTTTTGATGGGGACG TERM 1429 2517815 - 2517801 - R 75 -5.6 -4.58773 | CTCAGCAAAGCAAAA CCCGAG ACG CTTGGG ACTGGCCTCGGGTTA Synpcc7942_2441 2518650 - 2517856 - | phosphate ABC transporter permease Synpcc7942_2442 2519609 - 2518698 - | phosphate ABC transporter permease Synpcc7942_2443 2520541 - 2519609 - | phosphate ABC transporter permease TERM 1430 2520612 - 2520583 - R 100 -20.9 -3.80893 | opp_overlap 2520590, overlap 2520590 ATCGCACAATCCAAA CGAGAAAGCTCGG GAAC CCGAGCTTTCTCG TCAAGGCTCATTATT TERM 1431 2520605 - 2520590 - R 85 -10.4 -4.15328 | opp_overlap 2520590, overlap 2520583 AATCCAAACGAGAAA GCTCGG GAAC CCGAGC TTTCTCGTCAAGGCT TERM 1432 2520590 - 2520605 + r 81 -10.4 -3.96327 | opp_overlap 2520590 2520583 AATCCAAACGAGAAA GCTCGG GAAC CCGAGC TTTCTCGTCAAGGCT Synpcc7942_2444 2521640 - 2520627 - | phosphate binding protein TERM 1433 2521891 - 2521856 - R 90 -12 -3.91196 | TCTAGACAGAGGAAA GGCTAGCAAATCGAGA AGTT TCTCAACCTACTAGCC TCAACAACTAAATCG Synpcc7942_2445 2522933 - 2521920 - | phosphate binding protein TERM 1434 2522104 - 2522123 + g 75 -2.1 -5.09895 | overlap 2522105 TGCAGGTAGAAGTTC ACAAACG ATCTGA CGTTTGC TTTTTTGGCTGCCTG TERM 1435 2522254 - 2522213 - G 73 -12.5 -2.63079 | gap 1, opp_overlap 2522220 2522223, overlap 2522210 2522209 2522218 TTTGGACAGAAGGCA TCACAGC-CTTGCCGTTGCT GTT AACAACAGCAAGTGCTTTGA GCTTACCTTTGTTCT Synpcc7942_2446 2523919 - 2523086 - | methionine aminopeptidase TERM 1436 2524005 - 2523994 - H 81 -5.8 -4.76892 | overlap 2523995 ACATGAATTGAAAAA CCGA GCGA TCGG AGCAGTTTGGTCAGA TERM 1437 2524037 - 2523995 - H 71 -9.2 -3.45051 | gap 1, overlap 2523994 2524022 CATGAATTGAAAAAC CGAGCGATCGGAGCAGTTT GGTCAG AATCTGCA-CGATCGCCCG CAGACTCAGATTCCA Synpcc7942_2447 2524094 - 2524315 + | hypothetical protein Synpcc7942_2448 2524464 - 2526071 + | GTP-binding protein HflX Synpcc7942_2449 2526169 - 2526804 + | 1-Cys peroxiredoxin TERM 1438 2526845 - 2526873 + T 93 -8.2 -4.80882 | gap 1, opp_overlap 2526845 CTTCTGCATCAAAAA TCCCTCGCCAGAG TTTC CTGTGG-GAGGGA TTTTTAGTGTCGAAT TERM 1439 2526873 - 2526845 - T 88 -8.2 -4.72272 | gap 1, opp_overlap 2526845 CTTCTGCATCAAAAA TCCCTCGCCAGAG TTTC CTGTGG-GAGGGA TTTTTAGTGTCGAAT TERM 1440 2526962 - 2526914 - T 70 -10.5 -2.71731 | gap 1 GCCAGTGCTGAAGGA TCGCTACCTACATCCATCTCTC GAGAAG GAGAGGTC-ATGCAGGTAGCGA TCGCGTGCAACAACT Synpcc7942_2450 2529291 - 2526976 - | general secretion pathway protein D TERM 1441 2528562 - 2528579 + g 70 -11.3 -3.04144 | opp_overlap 2528564, overlap 2528564 TCGGGAAGGTGACAG CAGTGCC TTGG GGCACTG TGTTGGAGATCGCAA TERM 1442 2528990 - 2528970 - G 72 -9.7 -3.55761 | overlap 2528937 CACTCACTTGGGAAA CTGCGATCG ACT CGATCCCAG GTACCGGGTTCGGCT Synpcc7942_2451 2530163 - 2529369 - | putative type IV pilus assembly protein PilO Synpcc7942_2452 2530876 - 2530160 - | Tfp pilus assembly protein PilN-like TERM 1443 2530628 - 2530650 + g 77 -7.7 -4.4634 | overlap 2530645 GCTCTTGAGGCGGGC TTCTGCTGG CTGCC CCAGCTGAA TTTGTTGTTCGAGTT Synpcc7942_2453 2531958 - 2530879 - | type IV pilus assembly protein PilM Synpcc7942_2454 2533374 - 2532100 - | adenine phosphoribosyltransferase TERM 1444 2532312 - 2532293 - G 70 -3.4 -4.72497 | overlap 2532294 TATTCAGCAATAAAA GCGCCGCT GAGC AGGGTCGC GAACTCAAAGCCCAA Synpcc7942_2455 2533536 - 2534168 + | hypothetical protein Synpcc7942_2456 2534175 - 2535125 + | hypothetical protein glyQ 2535240 - 2536118 + | glycyl-tRNA synthetase subunit alpha TERM 1445 2537672 - 2537701 + G 74 -11.3 -3.36289 | ACTTGGCCTCGACTG CGCCGCCGCTGGC GATC GCTGGCCGTGGCG TTGATTGCGATCGTC Synpcc7942_2458 2536184 - 2538358 + | ComEC/Rec2-related protein Synpcc7942_2459 2538622 - 2539710 + | hypothetical protein Synpcc7942_2460 2541181 - 2539907 - | DNA-cytosine methyltransferase TERM 1446 2540622 - 2540612 - G 75 -2.4 -5.06816 | opp_overlap 2540612 ATTTTCTAACAAAAA GGCC TTG GGTC GTCTTCTTTCAATAA Synpcc7942_2461 2542737 - 2541304 - | hypothetical protein TERM 1447 2541436 - 2541448 + g 88 -7.7 -5.06816 | GATATTTTCCGGATT GATCG CCA CGATC TTTTTGTTGGGGAAT TERM 1448 2542252 - 2542241 - G 70 -3 -4.70319 | opp_overlap 2542241, overlap 2542236 2542235 GCATTAAAACCAAAA TCAA CGAC TTGA GTTTGATCAGCATTT Synpcc7942_2462 2544106 - 2542826 - | sugar kinase TERM 1449 2542956 - 2542967 + g 75 -5.8 -4.56597 | TGTTGACGGAGTTGT TGCC AAAC GGCA TTTTTAGCCCCACCA TERM 1450 2543273 - 2543249 - G 79 -4.1 -5.03314 | TGTATCCGGAAAAAA CTGCCGCAGGG TCG CGCCACCGCAG TTGGAAGCACCGCCC TERM 1451 2544065 - 2544028 - G 100 -17.9 -4.1399 | gap 1, overlap 2544053 TGACCGATACAGAAA CCGAGCGATCG-CTGTCA AAA TCACAGGCGATCGCTCGG GCTCCAGAGGTGCCG Synpcc7942_2463 2545371 - 2544118 - | S-adenosylmethionine synthetase Synpcc7942_2464 2546166 - 2545468 - | N-acetylmannosamine-6-phosphate 2-epimerase Synpcc7942_2465 2546586 - 2546335 - | hypothetical protein Synpcc7942_2466 2546850 - 2547557 + | two component transcriptional regulator aroE 2548443 - 2547577 - | shikimate 5-dehydrogenase TERM 1452 2549030 - 2549008 - g 70 -9.9 -3.46088 | overlap 2549006 AGACGCCAGCAAATA CCTGGGTGA AACCG TCACCCAAG CCGTGATCACGGTTC Synpcc7942_2468 2548622 - 2550526 + | molecular chaperone DnaK TERM 1453 2550553 - 2550572 + F 100 -12.8 -5.37345 | opp_overlap 2550552 2550551 GTTTGGGAATGAATC GCCGGGCC GCAA GGTCCGGC TTTTTTATGCTTCAG TERM 1454 2550966 - 2550983 + G 71 -6.9 -4.20696 | opp_overlap 2550966 CGCAACAAAAACTGA TCCGGGC GATC GCGCGGA TTTTGCCCTTGGTGC Synpcc7942_2469 2550704 - 2551474 + | hypothetical protein Synpcc7942_2470 2551697 - 2552464 + | hypothetical protein nusB 2552611 - 2553252 + | transcription antitermination protein NusB TERM 1455 2553976 - 2553937 - g 77 -7.9 -4.36914 | gap 2, overlap 2553965 GCGGTCTGGATAAAA CCCGCCGCAG-CCTC-GTC AACC AACTGAAGTCTGCGGTGGG CCAAGGCCCCCTCAG Synpcc7942_2472 2553267 - 2554823 + | signal recognition particle-docking protein FtsY Synpcc7942_2473 2555003 - 2556391 + | serine phosphatase Synpcc7942_2474 2556447 - 2556608 + | hypothetical protein Synpcc7942_2475 2556692 - 2558116 + | argininosuccinate lyase TERM 1456 2558462 - 2558486 + G 71 -7.7 -4.04318 | overlap 2558463 CTATAGCTGGTGGGC AGTGGGTGTGG TTG CCGCTCCCACC TTTATCCTCTGTGGC TERM 1457 2558463 - 2558485 + G 70 -11.2 -3.02109 | overlap 2558462 TATAGCTGGTGGGCA GTGGGTGTGG TTG CCGCTCCCAC CTTTATCCTCTGTGG Synpcc7942_2476 2558256 - 2558591 + | hypothetical protein Synpcc7942_2477 2559484 - 2558588 - | hypothetical protein Synpcc7942_2478 2559874 - 2559500 - | photosystem II reaction center W protein TERM 1458 2560529 - 2560541 + G 84 -5.5 -5.08824 | overlap 2560513 CCGCGATCGCAGGAC CTAGC GTG GCTGG TTTTTTGGGTCAGCA Synpcc7942_2479 2560375 - 2560941 + | pilin-like protein Synpcc7942_2480 2561848 - 2560946 - | prolyl 4-hydroxylase, alpha subunit Synpcc7942_2481 2563068 - 2561836 - | hypothetical protein Synpcc7942_2482 2563704 - 2563111 - | hypothetical protein Synpcc7942_2483 2565164 - 2563680 - | hypothetical protein Synpcc7942_2484 2565989 - 2565297 - | hypothetical protein TERM 1459 2565446 - 2565433 - G 75 -2.3 -5.1101 | opp_overlap 2565433 GCAGTACGGAAAAAA GCACG CAGG CCTGC TGTATTGCTGCTGCT Synpcc7942_2485 2566728 - 2566135 - | hypothetical protein Synpcc7942_2486 2568305 - 2566725 - | hypothetical protein TERM 1460 2568158 - 2568173 + g 75 -6.1 -4.56775 | GATCAACACTATTCC GCTGG CTCGAC CCAGC TTTTTCACCAGCACT TERM 1461 2568260 - 2568278 + g 81 -3 -5.24129 | opp_overlap 2568258, overlap 2568258 2568256 TGCCTAGGATATAGC CGCGATCG CTG CTGTTGCG TTTTTTGTGAACCCA Synpcc7942_2487 2568613 - 2568831 + | hypothetical protein TERM 1462 2569049 - 2569035 - g 84 -5.6 -5.08824 | GGCCCAGTCAAAAAA CTCGGC GAT GGCGAG CTGACCTGTGCCCAG Synpcc7942_2488 2568903 - 2569511 + | hypothetical protein Synpcc7942_2489 2569594 - 2569869 + | hypothetical protein miaA 2570884 - 2569964 - | tRNA delta(2)-isopentenylpyrophosphate transferase TERM 1463 2570794 - 2570782 - G 74 -7.7 -4.2231 | AATCAGCACTCAAAA TTGGG CTG CCCAA ACGCTGGGCGATCGC gyrB 2571012 - 2572949 + | DNA gyrase subunit B Synpcc7942_2492 2574068 - 2573355 - | ATPase Synpcc7942_2493 2574822 - 2574061 - | ATPase Synpcc7942_2494 2575742 - 2574819 - | putative branched-chain amino acid ABC transporter, permease protein TERM 1464 2575380 - 2575370 - G 76 -6.8 -4.66833 | overlap 2575372 GGGGAATCCCAAAAA TGCC GAC GGCA CCGCCCGTGATCGAG TERM 1465 2575474 - 2575457 - G 75 -9.1 -4.04206 | CGATTGCCAGATAAA TGCCGCG CAGC CGCAGCA CCGGATAGCCGACCA Synpcc7942_2495 2576687 - 2575746 - | integral membrane protein of the ABC-type Nat permease for neutral amino acids NatD Synpcc7942_2496 2577886 - 2576687 - | branched-chain amino-acid ABC transport system periplasmic binding protein Synpcc7942_2497 2578371 - 2577916 - | nucleoside diphosphate kinase TERM 1466 2578392 - 2578410 + r 72 -10.3 -3.32647 | opp_overlap 2578389 2578392 TAGTCCTCAAGACGA GGCAAGC ATTGA GCTTGCC TTCCTATGGTTCGGG Synpcc7942_2498 2579715 - 2578471 - | Band 7 protein Synpcc7942_2499 2581055 - 2579715 - | Band 7 protein TERM 1467 2580092 - 2580110 + g 76 -6.6 -4.59773 | overlap 2580094 CGGCAGGTAAGACCT CATCGGCT TCT AGCCGGAG TTTTTCGAGCTCCGC Synpcc7942_2500 2581716 - 2581096 - | hypothetical protein TERM 1468 2581896 - 2581924 + H 100 -13.1 -3.85698 | overlap 2581900 GCGGCGCTAATATGG GAAGGCGTTGCGG CGG CCGCAGCGCTTGC TTTCTCAGCCGCCCA TERM 1469 2581900 - 2581920 + H 100 -14.7 -3.6053 | overlap 2581896 CGCTAATATGGGAAG GCGTTGCGG CGG CCGCAGCGC TTGCTTTCTCAGCCG Synpcc7942_2501 2581939 - 2583003 + | phospho-2-dehydro-3-deoxyheptonate aldolase Synpcc7942_2502 2584313 - 2583000 - | hypothetical protein TERM 1470 2583058 - 2583092 + g 79 -7 -4.7497 | opp_overlap 2583058 TGGCGATCGCCAATA TTCCCCGGGAAGCTGA CAA TCGGCAGACTGGGGAA TTTTTGATGGCTGGC Synpcc7942_2503 2585460 - 2584495 - | protochlorophyllide oxidoreductase Synpcc7942_2504 2586072 - 2585668 - | hypothetical protein Synpcc7942_2505 2586130 - 2586786 + | caffeoyl-CoA O-methyltransferase Synpcc7942_2506 2587497 - 2586799 - | phosphoadenosine phosphosulfate reductase TERM 1471 2587395 - 2587379 - G 71 -6.5 -4.19953 | GACTGAATGCCAAAA CTCGTGC TGA GCACCAG CCCCGATCCAAATTC Synpcc7942_2507 2587797 - 2587537 - | hypothetical protein TERM 1472 2588572 - 2588544 - g 75 -11 -3.53224 | gap 1, opp_overlap 2588546 2588559 GAGCTGGCCTGCAAA CTGGC-CGATCGC TTGG GCGATCGCGCCTG GATTCGCCTGATTGA TERM 1473 2588546 - 2588570 + G 70 -12.2 -2.54371 | gap 1, opp_overlap 2588544, overlap 2588559 GCTGGCCTGCAAACT GGC-CGATCGC TTGG GCGATCGCGCC TGGATTCGCCTGATT Synpcc7942_2508 2588028 - 2589224 + | type 2 NADH dehydrogenase NdbB Synpcc7942_2509 2589234 - 2589887 + | HAD family hydrolase Synpcc7942_2510 2589959 - 2590171 + | translation initiation factor 1 TERM 1474 2590247 - 2590273 + T 90 -7.4 -4.78839 | gap 1, opp_overlap 2590247 2590243 TCAATACACAATCAA GGGCTG-AATC TAGAGC GATTGCAGCCC TTTTGTTGTGCGATT Synpcc7942_2511 2590759 - 2590256 - | hypothetical protein Synpcc7942_2512 2592123 - 2590765 - | hypothetical protein TERM 1475 2591518 - 2591548 + g 77 -13.4 -3.03159 | GCGATCGAGGCCGTA GTTGGTGGTGATCT GCG AGATCAGCACCAGC TCTTGCACGCCTTCA TERM 1476 2592631 - 2592646 + G 71 -9 -3.73775 | CTTTGGCGATCGCTA GCTGCA CGGG TGCAGC TTTCATCCGCGTCAA Synpcc7942_2513 2592285 - 2593169 + | photosystem I assembly BtpA TERM 1477 2594018 - 2593997 - g 76 -5.1 -4.82901 | gap 1, opp_overlap 2593997 2594006, overlap 2593999 GCCCTGCTAGAAAAA GC-CGATCCC GCC GCGATCGTGC TGCATTGTCTGCCGG Synpcc7942_2514 2593241 - 2594158 + | ornithine carbamoyltransferase Synpcc7942_2515 2596459 - 2594192 - | putative DNA helicase Synpcc7942_2516 2596958 - 2596719 - | hypothetical protein Synpcc7942_2517 2597729 - 2597031 - | hypothetical protein glgA 2599148 - 2597751 - | glycogen synthase TERM 1478 2599026 - 2599014 - G 73 -9.1 -3.86897 | CTTACTGTTCAGAAA GCCGT AGT ACGGC ATGAAGATTCGGACA Synpcc7942_2519 2601896 - 2599191 - | diguanylate cyclase/phosphodiesterase Synpcc7942_2520 2602689 - 2601979 - | hypothetical protein Synpcc7942_2521 2604026 - 2602698 - | nucleotide binding protein, PINc Synpcc7942_2522 2605010 - 2604084 - | glycerol-3-phosphate dehydrogenase (NAD(P)+) TERM 1479 2604913 - 2604894 - GH 72 -10 -3.34398 | overlap 2604892 TGTTGCTGCCAAAGA GGTCTCAC TTCG GCGAGACC ATTGCCGCACCTCAA Synpcc7942_2523 2605009 - 2605266 + | hypothetical protein TERM 1480 2605781 - 2605743 - g 81 -4.4 -5.1356 | overlap 2605747 GCCGAGCAACAAAAA CAGATGGCGACCTTGGTC CCC GTCGAAGGCCGCAATGCG GCGATCGGCGATGTG tig 2605278 - 2606702 + | trigger factor TERM 1481 2606744 - 2606770 + F 90 -14.4 -2.69799 | opp_overlap 2606742 2606741, overlap 2606729 GGCGCGGCATAATTG TCGGCAGCGGGA CTC TCTCGCTGCCGC TGCTGTATCCAGTGC Synpcc7942_2525 2606782 - 2607516 + | ATP-dependent Clp protease proteolytic subunit ClpP TERM 1482 2608208 - 2608172 - g 70 -5.2 -4.51799 | gap 2, opp_overlap 2608174, overlap 2608164 2608174 ACGAAATCGACAAAA TCGCGCGCAAGAGCGAAA ACC CTTCGATC--ACGCGCGA TGTCTCGGGCGAAGG clpX 2607529 - 2608878 + | ATP-dependent protease ATP-binding subunit TERM 1483 2609269 - 2609280 + G 75 -5.8 -4.57569 | TTACTTACTCCCCGA TCGC CTTT GCGA TTTTTCAGCAGATCA Synpcc7942_2527 2608875 - 2609717 + | esterase-like Synpcc7942_2528 2609741 - 2610427 + | hypothetical protein TERM 1484 2610703 - 2610682 - T 100 -15.9 -5.252 | opp_overlap 2610680 GATTGCCATAAAAAA GCCTGCTGG AACT CCAGCAGGC GATCTGTAGGCGTCG TERM 1485 2610744 - 2610724 - T 74 -9.7 -3.53444 | opp_overlap 2610734 GTAGGCGTCGTCAAA CAGGATAGG GAG CCAATCCTG GCGAATTTTTAGCCA Synpcc7942_2529 2611037 - 2610753 - | hypothetical protein TERM 1486 2611447 - 2611408 - g 79 -13 -3.53012 | gap 1, opp_overlap 2611412, overlap 2611409 2611411 TTTCTCTTGCTGAAA TGATGGAGTCTGGTGTCCA CTT TGGACACCAGACTCG-TCG TTGGAACCCCCGCAT TERM 1487 2611446 - 2611409 - g 85 -16.5 -2.71712 | gap 1, opp_overlap 2611412, overlap 2611408 2611411 TTCTCTTGCTGAAAT GATGGAGTCTGGTGTCCA CTT TGGACACCAGACTCG-TC GTTGGAACCCCCGCA TERM 1488 2611445 - 2611411 - g 83 -15.8 -2.90496 | opp_overlap 2611412, overlap 2611409 2611408 CTCTTGCTGAAATGA TGGAGTCTGGTGTCCA CTT TGGACACCAGACTCGT CGTTGGAACCCCCGC TERM 1489 2611412 - 2611444 + G 95 -19.3 -2.70932 | opp_overlap 2611411 2611409 2611408 TCTTGCTGAAATGAT GGAGTCTGGTGTCCA CTT TGGACACCAGACTCG TCGTTGGAACCCCCG TERM 1490 2611898 - 2611884 - g 74 -4.2 -4.75372 | ATCATCGACCAAAAA CGCG AGTACAA CGCG GTCCAAGAATGCCAA rpsB 2611383 - 2612138 + | 30S ribosomal protein S2 tsf 2612241 - 2612906 + | elongation factor Ts TERM 1491 2612947 - 2612973 + T 100 -12.3 -5.41143 | opp_overlap 2612945 2612943 2612947 CGAGTTAGAAATATA GGGGCAGAGCC GATCG GGTTCTGCCTC TTTTTTTGCGCGATC Synpcc7942_2532 2613889 - 2612990 - | hypothetical protein TERM 1492 2613808 - 2613795 - G 70 -5.2 -4.48713 | opp_overlap 2613795 2613796, overlap 2613796 TGCACCAACAATAAA GGCG GGCGAT CGCC TGCTGTCTCCCCAGC Synpcc7942_2533 2613998 - 2614378 + | hypothetical protein Synpcc7942_2534 2615660 - 2614395 - | diguanylate cyclase with GAF sensor TERM 1493 2616562 - 2616586 + G 70 -10.7 -3.28393 | overlap 2616561 GTCCTTCGCTTGGGG GGCGACTGAGT CGG ACTCTGTTGCC TTGGCTCTTTGTATT TERM 1494 2618369 - 2618388 + G 75 -9.2 -4.08216 | overlap 2618370 CATTTTTTGCTTGCC GCTCGCCG CTTT CGGCGAGA TTTTGGGGCACCTAC TERM 1495 2618370 - 2618387 + G 75 -12.7 -3.04715 | overlap 2618369 ATTTTTTGCTTGCCG CTCGCCG CTTT CGGCGAG ATTTTGGGGCACCTA Synpcc7942_2535 2615811 - 2619110 + | diguanylate cyclase TERM 1496 2619107 - 2619133 + T 77 -7.2 -4.44667 | overlap 2619112 GTCAGGCTCGCCGAG CTGAGGCCAGCC TAT GGCTGGCTTGAA TTTCTTGTTGGAGGC TERM 1497 2619112 - 2619128 + T 95 -13.7 -3.41554 | overlap 2619107 GCTCGCCGAGCTGAG GCCAGCC TAT GGCTGGC TTGAATTTCTTGTTG Synpcc7942_2536 2619626 - 2619093 - | heat shock protein DnaJ-like clpP 2620231 - 2619632 - | ATP-dependent Clp protease proteolytic subunit Synpcc7942_2538 2620960 - 2620274 - | ATP-dependent Clp protease-like protein Synpcc7942_2539 2621647 - 2621102 - | hypothetical protein Synpcc7942_2540 2622298 - 2621837 - | blue-copper-protein-like protein rplS 2622353 - 2622766 + | 50S ribosomal protein L19 TERM 1498 2622895 - 2622916 + T 100 -10.9 -5.10933 | opp_overlap 2622895 GCGCGTTTTAAACAA CCTTCAGTC ACAG GACTGAGGG TTTTGTTTTGAGTGA TERM 1499 2622916 - 2622895 - T 74 -8.7 -3.90744 | opp_overlap 2622895 GCGCGTTTTAAACAA CCTTCAGTC ACAG GACTGAGGG TTTTGTTTTGAGTGA Synpcc7942_2542 2623725 - 2623378 - | putative cytochrome C6-2 Synpcc7942_2543 2624449 - 2623742 - | phage SPO1 DNA polymerase-related protein Synpcc7942_2544 2624868 - 2624479 - | hypothetical protein Synpcc7942_2545 2624982 - 2626160 + | aspartate aminotransferase Synpcc7942_2546 2626237 - 2626956 + | hypothetical protein Synpcc7942_2547 2627005 - 2627325 + | hypothetical protein leuD 2627423 - 2628031 + | isopropylmalate isomerase small subunit TERM 1500 2628059 - 2628085 + T 81 -7.3 -4.66537 | gap 1 TTGCTCGAGGTTAGA CCGATCGTTGGT GCCT GCCG-CGATCGG TTTTGTGTTGGGCGA Synpcc7942_2549 2628358 - 2628104 - | hypothetical protein TERM 1501 2629444 - 2629423 - g 74 -4.3 -4.7173 | opp_overlap 2629423 2629425 2629425 CACTACATCCAAAAA CACCAACTC TCTC GGGGTGGTG GTTTGCAAGGTGCCT Synpcc7942_2550 2628487 - 2629560 + | hypothetical protein Synpcc7942_2551 2632062 - 2629750 - | (NiFe) hydrogenase maturation protein HypF Synpcc7942_2552 2632862 - 2632134 - | hydrogenase accessory protein HypB Synpcc7942_2553 2633201 - 2632863 - | hydrogenase nickel insertion protein HypA Synpcc7942_2554 2633647 - 2633189 - | hypothetical protein Synpcc7942_2555 2635086 - 2633656 - | NAD-reducing hydrogenase HoxS beta subunit TERM 1502 2633994 - 2634034 + g 73 -12 -3.03771 | gap 2, opp_overlap 2633994 2633991 2634016, overlap 2634010 CCTCCAGACAATTGA CCCCAGCCTGCGATCGCAGG AAT CCTGT--TTGCAGGTTGGGG TCTTCAACCATCTCC TERM 1503 2634131 - 2634106 - G 77 -11.9 -3.32993 | gap 1, opp_overlap 2634126 GTAGTGATAGAGGAA GCTGCTGGTGAC TGT GCCACCAGC-GC GATCGCGCAGTTCCT Synpcc7942_2556 2635650 - 2635096 - | NAD-reducing hydrogenase HoxS delta subunit Synpcc7942_2557 2636354 - 2635638 - | bidirectional hydrogenase complex protein HoxU Synpcc7942_2558 2636518 - 2637684 + | cysteine desulfurase NifS TERM 1504 2637701 - 2637679 - T 100 -11.3 -5.24531 | ACCCGCCATAAAAAA GGCTGACCC GATTT GAGTCAGCC CCACTGCAAGTTAGC rplI 2638188 - 2637730 - | 50S ribosomal protein L9 TERM 1505 2638328 - 2638310 - H 76 -9.6 -3.72576 | opp_overlap 2638310, overlap 2638314 CCCTCGGCGAGCAAA GAAACCGC AGA ACGGTTTC TGTCTGAATGTGAAT TERM 1506 2638324 - 2638314 - H 70 -4.6 -4.49556 | opp_overlap 2638310, overlap 2638310 CGGCGAGCAAAGAAA CCGC AGA ACGG TTTCTGTCTGAATGT Synpcc7942_2560 2638476 - 2639036 + | acetyltransferase TERM 1507 2639092 - 2639121 + T 73 -9.3 -3.65199 | opp_overlap 2639095, overlap 2639095 CCATCAGATCAGAAA AAACCCCTGATGA AACT TCATCAGGGGTGG TTTAAATCAACGGTT TERM 1508 2639095 - 2639118 + T 95 -15.4 -2.94144 | opp_overlap 2639095, overlap 2639092 TCAGATCAGAAAAAA CCCCTGATGA AACT TCATCAGGGG TGGTTTAAATCAACG TERM 1509 2639118 - 2639095 - T 100 -15.4 -5.34555 | opp_overlap 2639095 2639092 TCAGATCAGAAAAAA CCCCTGATGA AACT TCATCAGGGG TGGTTTAAATCAACG Synpcc7942_2561 2639982 - 2639146 - | Delta-9 acyl-phospholipid desaturase TERM 1510 2640094 - 2640121 + G 80 -5.6 -4.91459 | opp_overlap 2640103 ACTCCCCAGCTTGTT TCTGAAGCAG AAGCAGAG CTGCTACAGA TTTTTGTCGGTCTTG TERM 1511 2640777 - 2640750 - g 80 -5.4 -4.8622 | opp_overlap 2640766, overlap 2640751 CTCGCTAATTAAAAA TCCGGGTGGCAC GATC GCACCAGCCGGT GGCTATGTGGCGGGG Synpcc7942_2562 2640073 - 2641302 + | aluminum resistance protein-like TERM 1512 2643138 - 2643150 + G 75 -9.1 -4.08394 | opp_overlap 2643131 CGCTAGAACGGAGCC TCGCC GCC GGCGA TTTTGCACCAGATCT Synpcc7942_2563 2641349 - 2644351 + | exonuclease SbcC Synpcc7942_2564 2644793 - 2644317 - | biotin carboxyl carrier protein Synpcc7942_2565 2645392 - 2644835 - | elongation factor P TERM 1513 2645177 - 2645190 + g 79 -2.4 -5.252 | GCCGTCTTTGTAGGT GTAC TGCAGC GTAC TTTTTTCTAGGACTG TERM 1514 2645251 - 2645264 + g 74 -4.5 -4.68506 | overlap 2645245 TTTTCTCGACGACGT TGCCG GTTT TGGCA TTTTTCAGCTTGGTT Synpcc7942_2566 2645522 - 2646619 + | peptidyl-prolyl cis-trans isomerase Synpcc7942_2567 2646633 - 2647616 + | thiamine monophosphate kinase Synpcc7942_2568 2648101 - 2647628 - | hypothetical protein TERM 1515 2647676 - 2647653 - G 77 -3.2 -5.15969 | gap 1, overlap 2647655 CCTGAACTCAAAAAA TTGGC-ACG GCAGTCT CGTAGCCAA GCCTGAACCGCTTGC Synpcc7942_2569 2648820 - 2648098 - | orotidine 5'-phosphate decarboxylase TERM 1516 2648154 - 2648132 - G 75 -11.2 -3.54129 | CAGACCCGCTGGAAA GCTGCCGCCG GAT CATCGGCAGC CGTGATCGGCCGGCC Synpcc7942_2570 2650032 - 2648824 - | tyrosyl-tRNA synthetase TERM 1517 2649309 - 2649326 + g 79 -4.1 -5.09225 | opp_overlap 2649309 2649308 TAAGGCCGACATAAT TGCCCAA GGAT TTGGACA TTTTTTGACTGCCAT Synpcc7942_2571 2650102 - 2651979 + | penicillin-binding protein 1A TERM 1518 2652065 - 2652077 + T 72 -7.7 -3.94746 | AATCAATCTTCTAGG GCTCA ATT TGAGC TTTCATTCGCTCTAG Synpcc7942_2572 2652377 - 2652060 - | hypothetical protein Synpcc7942_2573 2653346 - 2652516 - | manganese transport system membrane protein MntB Synpcc7942_2574 2654102 - 2653347 - | ATPase TERM 1519 2653919 - 2653904 - G 91 -9 -5.0538 | GCCCACGCCAAAAAA CCTCAC CCTG GTGAGG CACAAGTCCCAGCAA Synpcc7942_2575 2654163 - 2655104 + | Mn transporter MntC TERM 1520 2655173 - 2655219 + T 81 -8.7 -4.4078 | opp_overlap 2655174 2655176 2655180, overlap 2655175 2655176 TAGATAGGGATCGAA AGACTAACCCCCCTCCGCT GTTGTAGTG AGCAGAGGGGGGTTAGATG TTTTGATTAGGGACC TERM 1521 2655218 - 2655174 - T 88 -12.2 -3.6806 | opp_overlap 2655173 2655175 2655176, overlap 2655176 2655180 AGATAGGGATCGAAA GACTAACCCCCCTCCGCT GTTGTAGTG AGCAGAGGGGGGTTAGAT GTTTTGATTAGGGAC TERM 1522 2655175 - 2655217 + T 100 -13.5 -3.8125 | opp_overlap 2655174 2655176 2655180, overlap 2655173 2655176 GATAGGGATCGAAAG ACTAACCCCCCTCCGCT GTTGTAGTG AGCAGAGGGGGGTTAGA TGTTTTGATTAGGGA TERM 1523 2655216 - 2655176 - T 100 -19.2 -3.41836 | opp_overlap 2655175 2655173 2655176, overlap 2655174 2655180 ATAGGGATCGAAAGA CTAACCCCCCTCCGCT GTTGTAGTG AGCAGAGGGGGGTTAG ATGTTTTGATTAGGG TERM 1524 2655176 - 2655216 + T 100 -17 -2.88268 | opp_overlap 2655176 2655174 2655180, overlap 2655175 2655173 ATAGGGATCGAAAGA CTAACCCCCCTCCGCT GTTGTAGTG AGCAGAGGGGGGTTAG ATGTTTTGATTAGGG TERM 1525 2655212 - 2655180 - T 95 -14.2 -3.47029 | opp_overlap 2655176 2655175 2655173, overlap 2655176 2655174 GGATCGAAAGACTAA CCCCCCTCCGCT GTTGTAGTG AGCAGAGGGGGG TTAGATGTTTTGATT TERM 1526 2656995 - 2657013 + T 70 -6 -4.21194 | CTTGGGATTTCGGGG CATGGG ATTCTCA CCCATG TTTTCGCTACTCAAG TERM 1527 2657783 - 2657794 + T 72 -7.2 -4.2354 | ATGTTCTATTTCACT CCCC TTCC GGGG TTCTTTTCACCTTTC TERM 1528 2658019 - 2658038 + T 81 -10.8 -3.62096 | TGCTGTCCCACGACC CCAAACTC CGTG GAGTTTGG TTTAGGCTGGTCCCC Synpcc7942_2576 2662110 - 2660596 - | hypothetical protein TERM 1529 2660690 - 2660665 - G 73 -5.4 -4.59773 | overlap 2660668 TGCGATCGCTAAAAA GAGCAGCAGT AAACAG ACTGCCGATC GCGTGTCGTCTGGCT TERM 1530 2662135 - 2662157 + r 74 -7.7 -4.10657 | opp_overlap 2662135 2662134 2662132 2662152 2662153, overlap 2662121 CCTGGGCAACAACAC GCCCAGTCA TTCAC TAACTGGGC TTTTGCCCAATCTAC murQ 2663092 - 2662169 - | N-acetylmuramic acid-6-phosphate etherase TERM 1531 2662778 - 2662762 - G 70 -10.1 -3.38314 | overlap 2662760 CGGAACTGCGAAACA TGGCGGC CGA ACCGCCA GCCAAGATGCCCTGC Synpcc7942_2578 2663566 - 2663093 - | hypothetical protein Synpcc7942_2579 2664450 - 2663566 - | heat shock protein DnaJ-like Synpcc7942_2580 2666709 - 2664460 - | molecular chaperone DnaK TERM 1532 2667007 - 2666992 - H 70 -6.8 -4.08692 | GAACTTCGGTCAAAA CAGCAG TTGG CTGCCG GGAACCCCGCATGAG Synpcc7942_2581 2667018 - 2667386 + | ferredoxin (2Fe-2S) Synpcc7942_2582 2667390 - 2668211 + | myo-inositol-1(or 4)-monophosphatase Synpcc7942_2583 2668299 - 2668931 + | hypothetical protein Synpcc7942_2584 2668941 - 2669705 + | short chain dehydrogenase Synpcc7942_2585 2670228 - 2669713 - | BadM/Rrf2 family transcriptional regulator Synpcc7942_2586 2670355 - 2670792 + | hypothetical protein Synpcc7942_2587 2671393 - 2670866 - | hypothetical protein Synpcc7942_2588 2672932 - 2671412 - | 3-octaprenyl-4hydroxybenzoate decarboxylase TERM 1533 2672427 - 2672413 - G 77 -11.4 -3.55444 | GTTGCAGCCGGTAAA CGCCGA CGT TCGGCG TCCCCGTCTCAGGAT TERM 1534 2673463 - 2673484 + G 79 -3.8 -5.02074 | gap 1, overlap 2673451 TTGCGGCTGCCCTTG TCAATCGAC AGGCA GTCG-TTGA TTTTTTGAAGCGTGA Synpcc7942_2589 2673063 - 2673848 + | 2-phosphosulfolactate phosphatase Synpcc7942_2590 2674093 - 2674608 + | pilin-like protein-like Synpcc7942_2591 2674605 - 2675273 + | hypothetical protein pyrE 2675925 - 2675317 - | orotate phosphoribosyltransferase TERM 1535 2675854 - 2675822 - G 86 -5.5 -5.27399 | GAAGACAGCAAAAAA TCTCCTTCGCGATAG GCG CGATCGCAGAGCAGA TCGAGGAGCAAATCG Synpcc7942_2593 2676025 - 2676561 + | hypothetical protein TERM 1536 2677147 - 2677129 - g 74 -11 -3.29461 | opp_overlap 2677137 CAAGTTCGCCTAGAA CCGGCTGA CGA TCAGCCAG TGGACTTACTCGCAG Synpcc7942_2594 2676760 - 2677371 + | hypothetical protein Synpcc7942_2595 2677378 - 2678808 + | hypothetical protein Synpcc7942_2596 2678860 - 2679921 + | oxidoreductase Synpcc7942_2597 2679934 - 2680413 + | adenylate cyclase Synpcc7942_2598 2681486 - 2680410 - | hypothetical protein Synpcc7942_2599 2681839 - 2681486 - | hypothetical protein Synpcc7942_2600 2682813 - 2681983 - | protoheme IX farnesyltransferase Synpcc7942_2601 2683813 - 2682899 - | putative cytochrome aa3 controlling protein TERM 1537 2683427 - 2683412 - G 82 -2.5 -5.33866 | CAAACTGACAAAAAA CAGCA GGGCGG TGCCG AGATGAGCAGTGACC TERM 1538 2684570 - 2684584 + G 78 -5.7 -4.70659 | TCAATGTCAAGGGCC TCCAG TTCGC CTGGA TTTTTAACTATCCCA Synpcc7942_2602 2684044 - 2684991 + | cytochrome c oxidase subunit II Synpcc7942_2603 2685051 - 2686676 + | cytochrome-c oxidase Synpcc7942_2604 2686728 - 2687315 + | cytochrome c oxidase subunit III Synpcc7942_2605 2688034 - 2687378 - | hypothetical protein TERM 1539 2687801 - 2687811 + g 71 -8.2 -3.90112 | TAAGATCTCTCCCAG CCGC TTT GCGG TTTGGTTGACCGAAC thrS 2690119 - 2688305 - | threonyl-tRNA synthetase TERM 1540 2688906 - 2688916 + g 76 -6.8 -4.57073 | GCGGCCGCTTGAATT GCAG ACT CTGC TTTTTCCCAGACATC Synpcc7942_2607 2691003 - 2690206 - | exodeoxyribonuclease III Synpcc7942_2608 2691104 - 2691424 + | hypothetical protein Synpcc7942_2609 2691626 - 2692156 + | hypothetical protein Synpcc7942_2610 2692950 - 2692153 - | uroporphyrin-III C-methyltransferase Synpcc7942_2611 2693757 - 2692993 - | hypothetical protein TERM 1541 2694157 - 2694183 + G 70 -2.8 -4.73864 | opp_overlap 2694138 2694165, overlap 2694158 2694160 GGCGGCGGCAGCAGC CTACGCAAGACG TGG CGGCCTGCGTGC TTTTGTCTTGATTCC Synpcc7942_2612 2693828 - 2694928 + | threonine synthase TERM 1542 2694962 - 2694990 + T 83 -12.6 -3.39923 | overlap 2694957 AACCTTCGCCTTTTT GTCCTGATTCTT TGACC AAGGATCAGGAC TTAACTTTTGGTCAT Synpcc7942_2613 2695870 - 2695049 - | phosphoglycolate phosphatase