TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.317611 %AT, 3021918 nt, 20609 terms. Intergenic: 0.360791 %AT, H2T: 384314 nt, 3564 terms; T2T: 117754 nt, 1988 terms; H2H: 151758 nt, 2785 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|72160406|ref|NC_007333.1| Thermobifida fusca YX, complete genome (length 3642249) Tfu_0001 195 - 2042 + | chromosomal replication initiator protein DnaA TERM 1 2088 - 2030 - f 77 -14.9 -2.86271 | gap 5 GGCCCACCACAACCA CCACCATCTGTGAACGGGCGTCGGGGGTGG ACCG CCACCCCCGACGCCCGTTCAC-G--GGC-- TGGTCAGGGGGAGGT Tfu_0002 2800 - 3942 + | DNA polymerase III subunit beta Tfu_0003 4002 - 4886 + | 6-phosphogluconate dehydrogenase-like protein recF 4988 - 6121 + | recombination protein F Tfu_0005 6111 - 6632 + | hypothetical protein TERM 2 7486 - 7436 - g 70 -8.9 -3.82665 | gap 1, overlap 7428 TACGAGATGACCAAA CCGGTCACCGAGCTCATCAGGCGG GAGC CCACC-GACGAGACCGGCACCCAG ATCACGTTCTGGCCG TERM 3 8155 - 8125 - g 72 -14 -3.1637 | AGACATCGTCACCAA GGCGACCCAGGC CGCCCGC GCCCGGATCGCC GCCCGCCAAGCCCGG gyrB 6950 - 8935 + | DNA gyrase subunit B TERM 4 8990 - 8979 - f 71 -4.4 -4.4767 | overlap 8982 CGACCCACCAGAAAA GGAT CGAC ATCC CGTGACGGATGTGAA TERM 5 10487 - 10467 - g 82 -11.1 -4.12942 | overlap 10457 CGAAATCGTCGAAAA GTACGGCGA TGA CCGCCGCAC CGAGATCGTCCCCTA TERM 6 10932 - 10908 - g 82 -15.7 -3.46509 | overlap 10902 GGTGAAGAAGACCAA GCTGGCGGAGT TCG ACTCCGCCCGC TCCTCCGGCATCATC Tfu_0007 8992 - 11538 + | DNA gyrase subunit A TERM 7 11606 - 11552 - f 77 -12.1 -3.60296 | gap 2, overlap 11553 GAGTTTCACGTGAAA CGCGTGCGCACGCGTGAGGGGAAAGGT ATT ACCCG-CCCCTCGCGCGTGC-CACTGG CCGCCATGTCCACCA TERM 8 11619 - 11634 + F 91 -9 -4.77438 | TGGCCGCCATGTCCA CCACTC AATA GAGTGG TTTTTCGTCATCAGT Tfu_0008 11738 - 12430 + | hypothetical protein TERM 9 12673 - 12695 + F 89 -10.5 -4.55798 | ACGCCCACAGTTCAA GGCCTTCGC CGGAT GCGGGGGCC TTTTAATTTCCGCTC Tfu_0009 13759 - 14910 + | putative transferase Tfu_0010 14917 - 15828 + | n-acetylneuraminate synthase TERM 10 15841 - 15880 + F 100 -12.8 -4.63479 | overlap 15831 15831 15843 TGAGCCGGCACGGTG CTGTCGTGTTCGGGAGGC TGCG GCCTCCCGAACATTCCCG TTTTCGTTTCTGCTG TERM 11 15843 - 15878 + F 70 -14 -2.61117 | overlap 15831 15841 AGCCGGCACGGTGCT GTCGTGTTCGGGAGGC TGCG GCCTCCCGAACATTCC CGTTTTCGTTTCTGC TERM 12 16472 - 16500 + G 71 -11 -3.59262 | gap 1 AAGACCGGTTGTGGA CGTGGCGGC-TGC ACTT GCACGCCGACACG TTTGCGGCTGTCCCC Tfu_0011 15907 - 16869 + | putative glycosyltransferase Tfu_0012 16874 - 18202 + | hypothetical protein Tfu_0013 18988 - 18230 - | putative integral membrane protein TERM 13 18359 - 18317 - G 71 -9.6 -3.72576 | GGTTCCGGTACGAAA CCGCATCCACCGGGGCACGC CGA GCATGGCCCAGCGGCGGCCG TTGACGGTGAACGGC TERM 14 19125 - 19104 - R 71 -4.3 -4.56597 | gap 1, overlap 19106 TCCCTGTCCGAAAAA CGGGC-GCCC CCT GGACCGCCAG TGCGCTGGGTGGGGA Tfu_0014 20473 - 19163 - | hypothetical protein Tfu_0015 21501 - 20470 - | hypothetical protein Tfu_0016 22844 - 21573 - | mannose-6-phosphate isomerase TERM 15 23415 - 23432 + r 79 -2.6 -5.04385 | GGCTCATGGGCAGAG CCTGTC GAGCGA GACCGG TTTTTTCCCGATCTG Tfu_0017 24821 - 23403 - | cell envelope-related transcriptional attenuator Tfu_0018 25561 - 24941 - | hypothetical protein TERM 16 26849 - 26829 - g 95 -13.3 -4.33417 | overlap 26839 CGCACCGACAAGAAA CCGCAGATC AGC GACCTGCGG GAGTCGGGTTCCATC Tfu_0019 25692 - 27041 + | primary replicative DNA helicase TERM 17 27497 - 27462 - T 100 -27 -4.28361 | GGAACGGCAGCAAAA GTTGTGGGGCCCCGCG CTCG CGCGAGGCCCCACAAC TCACGAGGGGTGGAT Tfu_0020 28045 - 27533 - | hypothetical protein Tfu_0021 28228 - 28061 - | hypothetical protein Tfu_0022 28594 - 28370 - | hypothetical protein TERM 18 28878 - 28857 - H 77 -8.7 -4.31433 | GACTGGTACAAGAAA CCCCTGG TTGTGATC CCAGGGG TAGAGTTTTAGATCC TERM 19 29367 - 29349 - H 85 -7.4 -4.60487 | GACCATCCCCAAAAA GCCCAC TTCGGCG GTGGGC AGCAGACGCGTCATC TERM 20 29647 - 29631 - H 72 -10.9 -3.44325 | ATGGTCCACAACGAA GATCTCC ATA GGAGATC AAACTATCGTTCCGG Tfu_0025 29947 - 30447 + | hypothetical protein Tfu_0026 30506 - 31000 + | hypothetical protein Tfu_0027 31030 - 31482 + | tRNA-adenosine deaminase TERM 21 31672 - 31656 - T 75 -4.4 -4.614 | overlap 31657 CGGAAGCACAGAAAA CCACTG GCCTG CAGTGA ACTCCCCGTGCGCAA TERM 22 32390 - 32424 + T 91 -16.5 -3.53012 | gap 1, overlap 32397 AATCCCACCTCCACC GCCAGCAGGCCGGTCC TGGA GGACCGGCCT-CTTGC TTTCCCCGGGGACGA TERM 23 32397 - 32418 + T 93 -17.3 -3.33151 | overlap 32390 CCTCCACCGCCAGCA GGCCGGTCC TGGA GGACCGGCC TCTTGCTTTCCCCGG Tfu_0028 33625 - 32519 - | hypothetical protein Tfu_0029 33709 - 34626 + | LysR family transcriptional regulator Tfu_0030 34904 - 34593 - | hypothetical protein TERM 24 35121 - 35100 - R 100 -13.7 -4.4715 | opp_overlap 35115 35119, overlap 35113 GCCCAACCTAGAAAA CCGCGGAGA AAAC CCTCCGCGG CAGGCGGCTGTTCCT Tfu_0031 36463 - 35195 - | seryl-tRNA synthetase TERM 25 36279 - 36303 + g 71 -2.1 -4.66537 | gap 1, overlap 36249 CGCTCCTCTGCGGAG GCG-CGGGAA ACAGAC TTGCCGACGC TTTTCTGTTCGGCGC TERM 26 36349 - 36333 - G 71 -11.5 -3.55622 | CGCAACGTTTCGAAA CGCGCCA GGG CGGCGCG GTGCCGCGAGTCCAG Tfu_0032 37511 - 36945 - | hypothetical protein TERM 27 38877 - 38843 - g 74 -10.8 -3.78934 | gap 1, opp_overlap 38840 38844, overlap 38840 TGCCGCGGACAAGAA CGGGCCGTCTCCC CCACGGTCCC GGGAGACGGCC-G CTTCTTCTCAGATGG TERM 28 38844 - 38878 + G 74 -10.8 -3.80733 | gap 1, opp_overlap 38843 38840, overlap 38840 GCCGCGGACAAGAAC G-GGCCGTCTCCC CCACGGTCCC GGGAGACGGCCGC TTCTTCTCAGATGGG Tfu_0033 38112 - 38906 + | GntR family transcriptional regulator Tfu_0034 39296 - 38934 - | hypothetical protein Tfu_0035 40034 - 39579 - | hypothetical protein TERM 29 40076 - 40117 + r 88 -17.9 -3.05384 | overlap 40074 CAATGTCAGTACGGG TGCGGCCGCCTTCTCCCAG AGGC CAGGTGGAAGGCGGCCGCC TTCCCTGCAGAGAGG Tfu_0036 40398 - 40150 - | hypothetical protein TERM 30 40648 - 40615 - R 95 -15.3 -3.96148 | overlap 40597 40596 40618 CTCTGGGATGAGAAA CGAGGGCTCCTCGCA GCGT TGGGAGGAGCCCTGG AGGCACTACTCGTTG TERM 31 40645 - 40618 - R 81 -15.6 -3.04122 | overlap 40615 TGGGATGAGAAACGA GGGCTCCTCGCA GCGT TGGGAGGAGCCC TGGAGGCACTACTCG Tfu_0037 41022 - 40654 - | hypothetical protein Tfu_0038 41438 - 41202 - | hypothetical protein TERM 32 41694 - 41661 - R 75 -4 -4.66953 | gap 2, opp_overlap 41662 41663 41666, overlap 41666 GGAAGAGGGTAAAAA CGGAACCTCCTCCA GTAGAGTG TGGAGGAGG-TC-G TCTTTTCCCGAAGGG Tfu_0039 41982 - 41749 - | hypothetical protein TERM 33 42236 - 42196 - R 100 -17.6 -4.12532 | gap 1, opp_overlap 42199, overlap 42198 42199 TGGGGGAGAGAGAAA GACGCGCCGCCTCCC-CAG ACTC CTGTGGGAGGCGGCGCTTT TATCTCAGGGCAGTG TERM 34 42234 - 42198 - R 100 -20.2 -3.65996 | gap 1, opp_overlap 42199, overlap 42196 42199 GGGGAGAGAGAAAGA CGCGCCGCCTCCC-CAG ACTC CTGTGGGAGGCGGCGCT TTTATCTCAGGGCAG TERM 35 42199 - 42233 + r 100 -23.7 -4.52589 | gap 1, opp_overlap 42198 42196 42199 GGGAGAGAGAAAGAC GCGCCGCCTCCC-CAG ACTC CTGTGGGAGGCGGCGC TTTTATCTCAGGGCA TERM 36 42233 - 42199 - R 100 -23.7 -2.79116 | gap 1, opp_overlap 42199, overlap 42198 42196 GGGAGAGAGAAAGAC GCGCCGCCTCCC-CAG ACTC CTGTGGGAGGCGGCGC TTTTATCTCAGGGCA Tfu_0040 42519 - 42286 - | hypothetical protein TERM 37 43054 - 43023 - g 86 -22.4 -2.52464 | overlap 43041 TTCCCCCGCAACGCA CGATGGCCGACGAC ACAA GTCGCCGGCCATCG CCTCAGACGTTGAAC Tfu_0041 42815 - 43180 + | hypothetical protein TERM 38 43253 - 43242 - T 84 -7.2 -4.81212 | TCGAGGATAAGAAAA CCGG AATT CCGG ATGAAGCGGATCCGA TERM 39 43415 - 43367 - T 100 -24 -4.84527 | gap 2 CCGAGACACGAAAAA CGGGGAGGACCGCGCCACCCGCCG CAC CGGCGAGCAGC-CG-TCCTCCCCG CAAACAGACCAGAAC Tfu_0042 44493 - 43435 - | aspartate semialdehyde dehydrogenase Tfu_0043 45761 - 44490 - | aspartate kinase recR 46582 - 45983 - | recombination protein RecR TERM 40 46664 - 46631 - R 73 -13.8 -2.89683 | overlap 46636 ACCGTAGTGGACACA CGGAACCGGTGAGG ACCCTA CCCCACCGGACCCG CGACCCCGGCTGACC Tfu_0045 47032 - 46682 - | hypothetical protein TERM 41 46732 - 46707 - G 85 -11.9 -4.28361 | gap 1 GGAAGCCCAGGAAAA CCAC-CGCCCAA CCC TTGGGCGAGCGG ACCCATCTTCTGCTG TERM 42 48265 - 48244 - g 93 -5.7 -5.35224 | overlap 48245 CGCAGAAAAAGAAAA CCGGGTGCC GCCC GTCACCCGC ATCGACAACACCCCG Tfu_0046 47324 - 49162 + | hypothetical protein dnaE 52773 - 49207 - | DNA polymerase III subunit alpha TERM 43 49602 - 49589 - G 72 -4.5 -4.44667 | TTGGGGAAGAACAAA GCCTC AATA GAAGC GTCCAAATCCTCGAC TERM 44 53072 - 53015 - R 74 -11.1 -3.57144 | gap 1 TGCCCCATCCCCAAA CGCCCTTGTGCGCCTCGCTGTCCCCGGT GCC AACGGGCACAGCGGGGCGCAGG-GGATG GTCAGCGCCGCTTCG Tfu_0048 53409 - 53074 - | hypothetical protein Tfu_0049 53640 - 53440 - | hypothetical protein TERM 45 53601 - 53590 - G 82 -4.4 -5.01732 | opp_overlap 53590 AAGCGCCCCAAAAAA GGAA GTGA TTCC TTTCAGATAGTCGAC Tfu_0050 55018 - 53663 - | hypothetical protein TERM 46 54163 - 54116 - G 70 -9.1 -3.86202 | opp_overlap 54116 TCCCACGAGACCAAA CCACGAACGCGTCCCATCG CTCTCCTCGT CGATAGGAAGCGGTCGAGG TTTTCCCGAGTAATC TERM 47 54273 - 54285 + g 70 -3.4 -4.45168 | GAGATGAATTCTTTC TCGA AGCCG TCGA TTTCTCTTTTGGAAA Tfu_0051 57261 - 55183 - | DNA polymerase III subunits gamma and tau TERM 48 57130 - 57096 - G 75 -8.5 -4.19817 | gap 1 GCGACCGAGCCAAAA TCCGCGCG-CTGGAGG TCTT CCCGCAGCCGCGTGGA CCGCTGAACAGGTAG TERM 49 57714 - 57750 + H 100 -25.3 -2.62263 | overlap 57711 TTCGCCTGAGAGGCA GGACGGGGTCCGGAGTT CTT AACTCCGGACCCCGTCG TCGTCTAGGACGAGT Tfu_0052 58893 - 59519 + | hypothetical protein TERM 50 60112 - 60092 - g 70 -8.3 -3.90744 | opp_overlap 60095, overlap 60095 TTCTTCCGCAAAGAA GAAGGAAGA GTT CCTCCCTTC TAGAAAAGACACGGT TERM 51 60657 - 60631 - g 77 -3.8 -4.71382 | ACAAGGATGGAAAAA CAAAAAATCTAG AAA CCAATTTTTTTG AGGGATATGCCTATG Tfu_0053 59730 - 60761 + | hypothetical protein TERM 52 61873 - 61912 + G 73 -15.8 -2.50016 | gap 1, overlap 61855 61872 61871 CCGTGTATGGGCGCT GCCG-TTGCTGCTGCGG ATGCCCG CCGCCGCAGCAATCGGC CTGTTCATGCTCACC Tfu_0054 60758 - 62374 + | hypothetical protein Tfu_0055 62826 - 63449 + | hypothetical protein Tfu_0056 65841 - 63613 - | WD-40 repeat-containing tyrosine protein kinase Tfu_0057 67549 - 65942 - | putative regulatory protein Tfu_0058 67652 - 68626 + | agmatinase TERM 53 68637 - 68666 + F 100 -12.8 -4.89477 | opp_overlap 68637 GCTAGGCCACAGATA CCGGGACGTGCC AGTGCC GCCGCGTCCCGG TTTTCTTCTTCACCC Tfu_0059 68727 - 70235 + | putative transporter TERM 54 70251 - 70281 + F 100 -14.7 -4.54047 | ACGTCGGGTCTGGCA GGGCCGCGCCC CGTCCCCTA GGGTGCGGCCC TTTTCTGTGGGGTCC Tfu_0060 70512 - 71909 + | putative oxidoreductase, oxygen dependent, FAD-dependent protein Tfu_0061 74154 - 71944 - | helicase, C-terminal:DEAD/DEAH box helicase, N-terminal TERM 55 72664 - 72677 + gT 71 -2.3 -4.56597 | overlap 72665 CGCGTAGTGGTTGAG TAGGG CTTC CCCGA TTTTTCCGGGCAGCA TERM 56 73151 - 73171 + gT 77 -3.2 -4.71382 | gap 1, opp_overlap 73152, overlap 73152 73165 GTGGACGTGCACACC ACGGT-GGC GGGT GCCGACCGG TTTTTCAGTCGTTGT Tfu_0062 75454 - 74123 - | hypothetical protein TERM 57 75274 - 75287 + gr 81 -3.7 -4.84274 | opp_overlap 75269, overlap 75271 CGATGACGAACCGGA CGGCG CCTG CCCCG TTTTTGATCTGCTTG Tfu_0063 79521 - 75451 - | hypothetical protein TERM 58 75874 - 75903 + g 78 -5.7 -4.59773 | overlap 75875 GGTTTTTCCGCCCAC TTCGGCGACGT CGAGCAGC AGGTCGCCGAG TTTTTCCCGCTCGCG TERM 59 79043 - 79067 + g 73 -7.2 -4.16016 | gap 2 AACCTGGCGTCAGCG CCGTAGACGGCT AGC AGCCG-CT-CGG TTTCTTCGCGGATGG TERM 60 81603 - 81582 - g 81 -7.9 -4.58395 | gap 1, opp_overlap 81582, overlap 81583 CTCAGTCCGGAAAAA TGGCGGCTGC TGC GC-GCCGCCG TGTCTGAAGGCCCGA Tfu_0064 80214 - 82304 + | putative DNA helicase TERM 61 82905 - 82890 - g 75 -4.7 -4.55295 | GGGCGGACAAAGAAA TCGAC GAAGTT GTCGA CATTTTCAACCGGGT Tfu_0065 82337 - 84619 + | hypothetical protein Tfu_0066 85276 - 85040 - | hypothetical protein Tfu_0067 85575 - 86345 + | enoyl-CoA hydratase TERM 62 86391 - 86336 - T 100 -17.8 -3.9461 | gap 2, opp_overlap 86348, overlap 86339 GGCGCGGAAGAACAA GAAGGAGTGAACGGGTGTGGGGCGGT CCACCT ACCGCCCCACACTC-TTCTC-CCTTC CCCCGGCTTGGGTTA TERM 63 86388 - 86339 - T 93 -13.7 -4.09963 | gap 2, opp_overlap 86348, overlap 86336 GCGGAAGAACAAGAA GGAGTGAACGGGTGTGGGGCGGT CCACCT ACCGCCCCACACTC-TTCTC-CC TTCCCCCGGCTTGGG TERM 64 86348 - 86381 + T 100 -20.4 -3.41878 | opp_overlap 86339 86336 CAAGAAGGAGTGAAC GGGTGTGGGGCGGT CCACCT ACCGCCCCACACTC TTCTCCCTTCCCCCG Tfu_0068 87579 - 86404 - | putative acyl-CoA dehydrogenase TERM 65 87443 - 87470 + g 78 -10.6 -4.20918 | AGTTTGCCGAGTGTG CGGAACGCTTCT CGGG GGAAGCGTTCGG TTTCTTCGGCTTCGG Tfu_0069 87664 - 88272 + | putative transcriptional regulator Tfu_0070 88919 - 88458 - | hypothetical protein TERM 66 88672 - 88687 + g 78 -10.4 -4.1891 | opp_overlap 88671, overlap 88668 TCCAGTGCGAGGAAT CCGACG GCGT CGTCGG TTTCTGTTGCCCACA TERM 67 89380 - 89438 + r 87 -14.6 -3.65812 | gap 2, opp_overlap 89388, overlap 89388 TTCTCGGTGGTGGTC -AGCACA-AAGGCCACGGGCGGGACCGC TTACT GCGGTCCCGCCCGTGGCCTTCTCCCCCC TTATCTTCCCCCCGG TERM 68 89388 - 89428 + r 100 -35.6 -3.31799 | opp_overlap 89388, overlap 89380 GGTGGTCAGCACAAA GGCCACGGGCGGGACCGC TTACT GCGGTCCCGCCCGTGGCC TTCTCCCCCCTTATC TERM 69 89428 - 89388 - R 100 -35.6 -3.96148 | opp_overlap 89388 89380 GGTGGTCAGCACAAA GGCCACGGGCGGGACCGC TTACT GCGGTCCCGCCCGTGGCC TTCTCCCCCCTTATC TERM 70 90352 - 90308 - R 77 -12.1 -3.58726 | gap 1, overlap 90310 90333 GTCCCCGACACACAA CACGGCTCGGGAA-GGCGGG ATGACA CCCTCCGCCCCCGAGCCGTC TCACTGATCCATGGC TERM 71 90350 - 90310 - R 84 -14.7 -3.37198 | gap 1, overlap 90308 90333 CCCCGACACACAACA CGGCTCGGGAA-GGCGGG ATGACA CCCTCCGCCCCCGAGCCG TCTCACTGATCCATG Tfu_0071 90963 - 90403 - | hypothetical protein Tfu_0072 92013 - 91027 - | putative quinone oxidoreductase TERM 72 92146 - 92173 + H 77 -12 -3.63805 | gap 1, opp_overlap 92140 CCCGACGAACCCGGA GACGGCGCGACTC GCC GAG-CGCACCGTC TTTCGACTATGAAAT TERM 73 92445 - 92425 - g 72 -3.9 -4.59773 | overlap 92427 CCCTATGCCCAAAAA CTGAGCC CTGAACC GGCTCCG ACCACCTCATCTCCC Tfu_0073 92245 - 94104 + | ATPase involved in chromosome partitioning TERM 74 94199 - 94144 - f 91 -16.3 -3.7347 | gap 3, opp_overlap 94196 94197 GGCAATAGGGAAGAA CACGGAGCA-GC-GTCGCGCACCAACAC ACC GTGTCGGTGCGCATCAGCATGC-CCGCG CGTATGCCCGCTTTT Tfu_0074 94397 - 95581 + | ABC branched-chain amino acid transporter substrate-binding protein Tfu_0075 95583 - 96356 + | ABC-type branched-chain amino acid transport systems ATPase component Tfu_0076 96353 - 97099 + | ABC-type branched-chain amino acid transport systems ATPase component TERM 75 97206 - 97218 + G 86 -10.5 -4.59773 | GGATGTGCTGAACTT CGCGC ACG GCGCG TTTTTGACCATCGGC TERM 76 97702 - 97740 + G 70 -14.5 -2.72661 | gap 1, overlap 97704 GTGTTCGCGATCGGC GGGGCCG-CGGCCGCGCT CGCG GGCGCGCTCGGCGGCCTC TACTTCGGGGTGATC Tfu_0077 97096 - 97992 + | branched-chain amino acid ABC transporter permease protein Tfu_0078 97989 - 99113 + | branched-chain amino acid ABC transporter permease protein Tfu_0080 102011 - 100065 - | GAF domain-containing protein Tfu_0079 99258 - 100133 + | alpha/beta hydrolase superfamily protein Tfu_0081 102811 - 101996 - | 3-hydroxybutyrate dehydrogenase Tfu_0082 103048 - 104292 + | esterase, PHB depolymerase TERM 77 104314 - 104353 + F 89 -18.5 -2.87931 | gap 1 CATGACCACCGTGTC AGCCCGTGGCGGCCGGGG CGCGA CCCCGGCCGCC-CGCGCG TATCTCAGCCCTCCA TERM 78 104451 - 104464 + F 75 -4.5 -4.61633 | overlap 104436 104435 AGCCCGATTCGAACC GGGCA TCTA TGCTC TTTTTCAAACTGTCT TERM 79 104648 - 104622 - f 90 -8.1 -4.86731 | overlap 104637 GCTGCTGAAATAAAA CCCG-TGCAAGAG AAA CTCT-GCAGCGGG TAGAGAACACATTGC Tfu_0083 104784 - 106598 + | phosphoenolpyruvate carboxykinase TERM 80 106660 - 106699 + T 100 -23.7 -3.53224 | overlap 106661 TCGGCGTCACGGCAC ACGTTGGCCCCCTCCAC AACGGC GTGGAGGGGGCCAACGG TTTGCGCGGAGGGTG TERM 81 106661 - 106698 + T 100 -27.2 -2.71791 | overlap 106660 CGGCGTCACGGCACA CGTTGGCCCCCTCCAC AACGGC GTGGAGGGGGCCAACG GTTTGCGCGGAGGGT Tfu_0084 107650 - 106919 - | hypothetical protein TERM 82 107922 - 107911 - g 72 -5.8 -4.24948 | overlap 107912 CGACCACACTCAAAA CCAG CACG CTGG AGCGCTGATCGTCCT Tfu_0085 107759 - 108214 + | hypothetical protein Tfu_0086 108704 - 109843 + | DNA polymerase III subunit beta Tfu_0087 110298 - 110008 - | hypothetical protein TERM 83 110271 - 110242 - G 70 -12.9 -3.28712 | opp_overlap 110239 CTGGCTGGCTGAGAA CAGATCCTCGGCG AGGC CACGGAGGATCTG GGCTTCCTCAGGCGT Tfu_0088 110726 - 110298 - | hypothetical protein Tfu_0089 110867 - 111697 + | hypothetical protein TERM 84 112106 - 112088 - f 75 -4.4 -4.62336 | opp_overlap 112094, overlap 112089 AGGCCAGCTCAAAAA TCACCCCG GTG CGCGGTGC CGTTTGATTCGGCGC TERM 85 112425 - 112398 - f 71 -10.6 -3.57406 | overlap 112396 GCCGGATCAGAAACA TCGTTACCGCTG TCAC CAGCGGAAACAA GACGAGAGTAAGCCG Tfu_0090 112611 - 113462 + | helix-hairpin-helix DNA-binding motif-containing protein Tfu_0091 113470 - 113661 + | hypothetical protein Tfu_0092 113933 - 114925 + | malate dehydrogenase TERM 86 114996 - 115030 + T 100 -18.6 -4.08692 | opp_overlap 114980 CCGGGGGCAGACGCG GGTGGCGGGCCAGC AGGTCGG GCTAGCCCGCCACC TTTTCCACAGGGTTG Tfu_0093 115446 - 115018 - | hypothetical protein Tfu_0094 116503 - 115646 - | hypothetical protein TERM 87 116573 - 116542 - R 100 -17.2 -4.58395 | opp_overlap 116538 116560 GGCAGCGGCCAAAAA CCGCTCCGGGGTGG TGTG CTTCCCCGGAGCGG TGAAGTTTGTCGCGG Tfu_0095 117139 - 116630 - | hypothetical protein TERM 88 117197 - 117187 - H 77 -8.2 -4.21194 | overlap 117188 CGCCAGCAGGGAAAA GGGG AAT CCCC GAGCCCCACCCGGTT Tfu_0096 117311 - 118114 + | phenazine biosynthesis PhzC/PhzF protein Tfu_0097 119002 - 118103 - | hypothetical protein TERM 89 119259 - 119272 + H 82 -5.9 -4.72272 | overlap 119260 CCGGTTGAAGCCTTA TGCGG AGTG CCGCG TTTTTGGTGCGGGGC TERM 90 120107 - 120097 - g 79 -2.4 -4.83169 | ACCCGGGCAGAAAAA GCGC TTG GCGG CTGTGCGATCGCGGT Tfu_0098 119935 - 120546 + | hypothetical protein Tfu_0099 120568 - 120924 + | hypothetical protein TERM 91 120923 - 120900 - f 74 -2.4 -4.78107 | gap 1, overlap 120902 CATCATGATCAAAAA GAGTCGCACGC AAA GCGT-CAACTG AACACCAACAGGTAT TERM 92 121711 - 121691 - g 73 -9.7 -3.83675 | opp_overlap 121691, overlap 121684 GAAGGCAAGGAAGAA GTCGGCG TGAAGTT CGCCGAC TACTTCGACTTCGCC TERM 93 123322 - 123295 - g 88 -14.9 -3.7941 | gap 1 CAGTGGGGAGAACAA CCGCT-CCGGCG GGGAG CGCCGGGAGCGG GGTGCGCCGCGGCGC Tfu_0100 121094 - 123427 + | RNA binding S1:resolvase, RNase H-like fold TERM 94 123434 - 123467 + T 84 -17.5 -2.69151 | overlap 123436 CTGGTGTAGTCGATG CGTGTGGGCGGTGTT GCCA GGCACCGCCCACATG TCGTCTATGCGGGGG TERM 95 123436 - 123465 + T 84 -16.5 -2.88999 | overlap 123434 GGTGTAGTCGATGCG TGTGGGCGGTGTT GCCA GGCACCGCCCACA TGTCGTCTATGCGGG Tfu_0101 124254 - 123472 - | hypothetical protein TERM 96 124340 - 124316 - H 79 -11.7 -3.93398 | opp_overlap 124304 124336, overlap 124334 ACTTAGATAGAAGAA TTATCGATAAT TGA ATTATCGATAA CAAAGCTATCTATTG TERM 97 124938 - 124922 - g 71 -2.1 -4.57073 | opp_overlap 124923, overlap 124923 124925 GACGTCGTCGAAAAA GCAGTGC TGG GCACAGT GCTTGGCGACGTCGT Tfu_0102 124388 - 125020 + | transcriptional regulator Tfu_0103 125036 - 125299 + | hypothetical protein TERM 98 125454 - 125421 - f 75 -13.8 -3.01712 | CTTCCCGGTGGAACA CCCCGCGTGTCCGC AGCGCG GCGGACACGCGGCT GGACGGAGCCCGGGA TERM 99 126065 - 126023 - f 79 -5.5 -4.60889 | gap 1, overlap 126013 126010 AACCAGCGCGAAAAA GCCGTCCACGC-CAGACATG CGCT CCCGCCTGCACGCAGACAGC GCCAAGTAGTCCGAC TERM 100 126130 - 126102 - f 75 -3 -4.83169 | ATTCGGTCAGAAAAA TCCGGTCCGAGA GGCTT CCGCGAACAGGA GAATCCGACAGAGAA TERM 101 126263 - 126231 - f 93 -14.2 -4.07568 | gap 1 CGGTTTCTTCCAAAA CCG-CGCCCCGAGAA AGCG CTCTCGGGACGTCGG AAGCCTCCTCGGGAC Tfu_0104 126888 - 127331 + | putative integral membrane protein TERM 102 127395 - 127441 + T 84 -16.7 -2.79183 | opp_overlap 127401 127418, overlap 127399 CGTGACTCAGCCTCG GCAACAGCGCCGGTCGG ACCACAGCAGCAC CCGACCGGCGCTGTTCC TCTCATCAAACTGCG TERM 103 127399 - 127437 + T 86 -16.1 -3.29471 | opp_overlap 127401 127418, overlap 127395 ACTCAGCCTCGGCAA CAGCGCCGGTCGG ACCACAGCAGCAC CCGACCGGCGCTG TTCCTCTCATCAAAC TERM 104 127435 - 127401 - T 75 -14.3 -3.02144 | gap 1, opp_overlap 127399 127395, overlap 127418 TCAGCCTCGGCAACA GCGCCGGTCGGACCAC AGCA GCA-CCCGACCGGCGC TGTTCCTCTCATCAA Tfu_0105 127868 - 127605 - | hypothetical protein TERM 105 128243 - 128193 - R 100 -20.7 -3.01119 | gap 1, opp_overlap 128198 128201, overlap 128198 128201 ACGCACGGACACACA GCAAAGAAGGTGGCCCCAG-GAAT CCGG ATCCCCTGGGGCCACCCTCTTTGA CCTCTGCTTATGCGA TERM 106 128238 - 128198 - R 100 -19.2 -3.91196 | gap 1, opp_overlap 128198 128201, overlap 128193 128201 CGGACACACAGCAAA GAAGGTGGCCCCAG-GAAT CCGG ATCCCCTGGGGCCACCCTC TTTGACCTCTGCTTA TERM 107 128198 - 128238 + r 90 -15.5 -3.65313 | opp_overlap 128198 128193 128201, overlap 128201 CGGACACACAGCAAA GAAGGTGGCCCCAGG AATCCGGATCC CCTGGGGCCACCCTC TTTGACCTCTGCTTA TERM 108 128235 - 128201 - R 100 -17.3 -4.07595 | gap 1, opp_overlap 128198 128201, overlap 128198 128193 ACACACAGCAAAGAA GGTGGCCCCAG-GAAT CCGG ATCCCCTGGGGCCACC CTCTTTGACCTCTGC TERM 109 128201 - 128235 + r 77 -15.8 -2.63585 | opp_overlap 128201 128198 128193, overlap 128198 ACACACAGCAAAGAA GGTGGCCCCAGG AATCCGGATCC CCTGGGGCCACC CTCTTTGACCTCTGC Tfu_0106 130466 - 128454 - | PAS protein phosphatase 2C-like Tfu_0107 131656 - 130736 - | hypothetical protein Tfu_0108 131789 - 132292 + | hypothetical protein Tfu_0109 134775 - 132370 - | PASTA TERM 110 132922 - 132973 + g 73 -12.8 -3.39595 | gap 1, opp_overlap 132922 132924, overlap 132969 CGGGTCGCCGACGAA CACGGCGCCGGCCAGGTTCG-GGGT GTA GCCCGCGAACCAGGCGCTCGCCGAG TTGTCGGTGGTTCCC TERM 111 132971 - 132924 - G 72 -13.3 -3.13403 | gap 1, opp_overlap 132922 132969, overlap 132922 GGTCGCCGACGAACA CGGCGCCGGCCAGGTTCG-GGG TGTAG CCCGCGAACCAGGCGCTCGCCG AGTTGTCGGTGGTTC TERM 112 133294 - 133314 + g 78 -6.7 -4.61527 | overlap 133295 133308 GTCGTAGCTTTGGCC GTCGGCCCG GGT CAGGCCGAG TTTTTCCGCCATTTT TERM 113 133522 - 133542 + g 72 -4 -4.56597 | gap 1 GCTGCCCGAGGTGAA GGACGTGCT GTAC GGCA-GTCC TTTTTCGAGGGCCGC TERM 114 133951 - 133927 - G 71 -9.9 -3.79906 | opp_overlap 133927 GTAGTCGCAGAAGAA CGGCTGCTTGC TGG GCATGCACCCG TTGCTGGGCGTGGAG TERM 115 134836 - 134821 - H 77 -4.6 -4.61566 | opp_overlap 134821 134835, overlap 134824 TCGGAAACGAGAAAA CAGCGA CGAA CCGCCG TGGGCTTCGCGTTGT Tfu_0110 135242 - 135550 + | putative regulatory protein Tfu_0111 136961 - 135822 - | putative ion-transporting ATPase TERM 116 136640 - 136670 + g 73 -10.5 -3.83205 | gap 1 CCCGCTGGGGGTCTG CGTGCGCTTCGACG GTCT CGTCGAAG-GTGCG TTTCATGTCCAGCAT Tfu_0112 138046 - 136958 - | putative ion-transporting ATPase TERM 117 137106 - 137118 + g 70 -3.3 -4.41616 | overlap 137052 137107 ACTCGCATGTGCCGG GCGTG TTC CACGA TTTCTTTGGACAGCT Tfu_0113 138090 - 138263 + | hypothetical protein Tfu_0114 138260 - 138727 + | hypothetical protein Tfu_0115 138774 - 139706 + | hypothetical protein Tfu_0116 139706 - 140560 + | putative hydrolase Tfu_0117 141415 - 140729 - | cyclic nucleotide-binding: regulatory protein, Crp Tfu_0118 141677 - 142453 + | endonuclease III / DNA-(apurinic or apyrimidinic site) lyase Tfu_0119 142450 - 143115 + | hypothetical protein TERM 118 143192 - 143230 + G 75 -5.8 -4.43189 | TATCGTCTTCGCGAT CTCGGGCTACCGGCAGGG GTT CATTGTCGGAGTCCTGAG TTTTGTGGGCTTCAT TERM 119 144017 - 143997 - g 100 -16.9 -4.18488 | opp_overlap 143996 143995 ATGCAGGCGAAGAAA GGCGACGAC GCG GTCGTCGCC GGTTTCCCCCGGGAC Tfu_0120 143148 - 144326 + | putative serine protease TERM 120 144411 - 144381 - T 80 -14 -3.34344 | overlap 144384 144403 GGACGGGGGAAGGAA TTACGGGCGTCTCA CCA TGAGACGCCCGTGG ACGTGCGGAAGGCGT TERM 121 144408 - 144384 - T 100 -20.1 -2.84098 | overlap 144381 144403 CGGGGGAAGGAATTA CGGGCGTCTCA CCA TGAGACGCCCG TGGACGTGCGGAAGG Tfu_0121 144971 - 144426 - | hypothetical protein Tfu_0122 145332 - 144979 - | anti-sigma factor antagonist TERM 122 145458 - 145448 - H 75 -3.2 -4.75309 | overlap 145452 GCAAAGTCAAGAAAA CCAC GCC GTAG CGCCAGTCGTACCCC Tfu_0123 145555 - 147840 + | helicase, C-terminal:DEAD/DEAH box helicase, N-terminal Tfu_0124 148636 - 148193 - | hypothetical protein Tfu_0125 148847 - 148641 - | hypothetical protein Tfu_0126 149722 - 148982 - | putative integral membrane protein Tfu_0127 150487 - 149735 - | putative integral membrane protein Tfu_0128 151686 - 150490 - | pilus assembly protein CpaF Tfu_0129 152777 - 151683 - | putative septum site determining protein TERM 123 153226 - 153206 - R 72 -11.1 -3.52317 | overlap 153202 153198 153207 GTAGAAAGGAAGTAA TCGATGGGG TCG CCCCATCGG ACACGCCGCAACTGG TERM 124 153225 - 153207 - R 75 -14.6 -2.70667 | overlap 153206 153202 153198 TAGAAAGGAAGTAAT CGATGGGG TCG CCCCATCG GACACGCCGCAACTG TERM 125 153344 - 153389 + r 90 -16.2 -3.78168 | gap 1, overlap 153323 AGTCCGGCGTGGTAT GGGCGATGCTGTGAACCTCCC ACTCA GGGATG-TCCCGGCATCGCCC TTGTTGCGTGTTTTT Tfu_0130 154314 - 153502 - | hypothetical protein Tfu_0131 154466 - 154927 + | hypothetical protein Tfu_0132 154924 - 155859 + | putative hydrolase Tfu_0133 155840 - 156337 + | hypothetical protein TERM 126 156555 - 156577 + F 73 -6.3 -4.3351 | overlap 156542 156558 ATGCCTTGAGCGCCG TGGCGCATG CGCTC CATGCGTTA TTTGTTGCGTTTTGT TERM 127 156558 - 156574 + F 75 -8 -4.25064 | overlap 156542 156555 CCTTGAGCGCCGTGG CGCATG CGCTC CATGCG TTATTTGTTGCGTTT TERM 128 156633 - 156619 - f 71 -4.3 -4.58242 | opp_overlap 156619 AAAAAAGCGACAAAA GAGAA GTTTG TTCTC TCTGTTGGGTGAATG TERM 129 156656 - 156688 + F 70 -5 -4.37092 | gap 2, overlap 156657 156658 156687 GGTGAATGTCGCATT TTTTGGGGTGTTGTCG GAC CG-CAA-ACCCCAAGG TTTTCTCGAAAACCT hppA 156826 - 159264 + | membrane-bound proton-translocating pyrophosphatase TERM 130 159335 - 159290 - f 100 -13.3 -4.77165 | overlap 159291 159292 TCCGCCAGAAGAAAA CCCGTCGCGCCGGGAAG CACGCGGCTCCC CTTCCCGGCGCGACGCC CGTGGAACCCGGCAA TERM 131 159334 - 159291 - f 91 -16.8 -3.45817 | overlap 159290 159292 CCGCCAGAAGAAAAC CCGTCGCGCCGGGAAG CACGCGGCTCCC CTTCCCGGCGCGACGC CCGTGGAACCCGGCA TERM 132 159333 - 159292 - f 93 -20.3 -2.67008 | overlap 159291 159290 CGCCAGAAGAAAACC CGTCGCGCCGGGAAG CACGCGGCTCCC CTTCCCGGCGCGACG CCCGTGGAACCCGGC Tfu_0135 159489 - 159962 + | hypothetical protein Tfu_0136 161285 - 159987 - | phosphoserine phosphatase Tfu_0137 161992 - 161378 - | hypothetical protein Tfu_0138 162642 - 162022 - | hypothetical protein TERM 133 162104 - 162140 + g 72 -3.7 -4.65916 | gap 2, overlap 162098 ACGCTTCCCCGCAGG CGGA-TC-GTGGGCGCG TTGAC CGTGACCGCCGAGTCCG TTTTCTTCAAGTCGA Tfu_0139 163057 - 163842 + | ABC transporter, ATP-binding protein TERM 134 164669 - 164720 + G 73 -16.7 -2.65354 | gap 1, overlap 164665 164668 CGCGCCCTGATCGTC GTCATCGGCCTCACCGCAGCAGTC CAACT GG-TGCTGCGGTGAGGCCGGTCAG TCAGTTTCGGCTGAG Tfu_0140 163958 - 164710 + | putative integral membrane protein Tfu_0141 165347 - 164721 - | metal-dependent phosphohydrolase, HD region Tfu_0142 166504 - 165620 - | hypothetical protein Tfu_0143 167503 - 166709 - | transcriptional regulator Tfu_0144 169300 - 168164 - | hypothetical protein Tfu_0145 169570 - 169992 + | fur family transcriptional regulator TERM 135 170414 - 170425 + F 70 -2.2 -4.61147 | AACTTCGGATATCAA CCAT AAAT GTGG TTTTCTCTCATATTC TERM 136 170442 - 170464 + F 75 -4.1 -4.70626 | gap 1 TTTCTCTCATATTCT GCCGCGAATC AGGA GAAT-GCGGC TTTTTCCGATTCTTC TERM 137 170504 - 170522 + F 80 -4.6 -4.72556 | overlap 170495 170502 ATCGCCTCTGTGTCG CAGATATG TGG TGTATCTG TTTTGTCCTTTTTCG Tfu_0146 170878 - 171678 + | surface protein TERM 138 171709 - 171736 + F 100 -22.8 -3.15999 | TGATTCCCACGTTCC GTGCCCCCGGCA GTCC TGCCGGGGGCAC TTGCGTGTCTGAGAA TERM 139 171783 - 171759 - f 82 -5.7 -4.73682 | TCTGAGAAGACAAAA TTCACAGTTCC GAA GGAACTCGGAA AAGCTTGGATTTTTC Tfu_0147 171869 - 173890 + | metal-dependent hydrolase Tfu_0148 173973 - 174743 + | hypothetical protein Tfu_0149 175058 - 175630 + | putative integral membrane protein TERM 140 175748 - 175778 + F 84 -16.8 -2.78816 | opp_overlap 175742 175739 CCATAACAGTGCCCG CAGGGGGCCGTACC CGC GGTACGGCCCCCAC TCTCATGGGGCCTGC TERM 141 176206 - 176159 - g 87 -17 -3.29144 | gap 1, opp_overlap 176154 176152, overlap 176160 GCACCGCCTGGACAA GGCCACTGGGCACCGGC-TGCCC GTG GTGCAGGCCGATGCGCAGTGGCT GCCGTTTGCCGACGC TERM 142 176205 - 176160 - g 82 -20.5 -2.57344 | gap 1, opp_overlap 176154 176152, overlap 176159 CACCGCCTGGACAAG GCCACTGGGCACCGGC-TGCCC GTG GTGCAGGCCGATGCGCAGTGGC TGCCGTTTGCCGACG Tfu_0150 175809 - 176639 + | hypothetical protein Tfu_0151 176721 - 176981 + | hypothetical protein Tfu_0152 176982 - 177260 + | hypothetical protein Tfu_0153 177500 - 178849 + | pectate lyase/Amb allergen TERM 143 178935 - 178971 + T 89 -13 -4.0896 | gap 1, overlap 178967 CACTGCGGCGGGCTC CTCCG-ATGCGGTCCCG GCCC CGGGACCGCATCCCGCG TTTTCAGAGCGGTTT Tfu_0154 179661 - 178975 - | phospholipid N-methyltransferase Tfu_0155 180659 - 179703 - | esterase / lipase TERM 144 180441 - 180426 - G 78 -6.1 -4.56597 | opp_overlap 180436, overlap 180428 GCCGCCGTGGAAAAA CACCG CGCACC CGGTG GCAGGATTGTCCGGC Tfu_0156 180859 - 181566 + | phosphoribosylformylglycinamidine synthase subunit I Tfu_0157 181600 - 182082 + | hypothetical protein TERM 145 182377 - 182340 - g 70 -8.3 -3.86015 | gap 1, overlap 182341 CAGTTCGGGGAGAAA GCGCCCGACACCGACGTG CTG CTCGTCGGGATCGG-CGA GAACGCGGGCGTGGT Tfu_0158 182115 - 184412 + | phosphoribosylformylglycinamidine synthase II Tfu_0159 184472 - 184714 + | hypothetical protein Tfu_0160 184954 - 186039 + | hypothetical protein Tfu_0161 186124 - 186354 + | hypothetical protein TERM 146 186468 - 186458 - T 72 -8.2 -4.11484 | overlap 186459 TTGAAGGTTGGAAAA GCGG CCG CCGC GGCGAAAACCCCGGA TERM 147 186656 - 186637 - T 100 -5 -5.63517 | opp_overlap 186646 CCCGGAAATAAAAAA GGGGAT GTGCGTCT ATCCCC GAAGGCGTGAATTTT Tfu_0162 187594 - 186809 - | 3-oxoadipate enol-lactonase Tfu_0163 189401 - 187692 - | tyrosine protein kinase:Serine/threonine protein kinase TERM 148 189657 - 189636 - H 71 -7.3 -4.07568 | opp_overlap 189635, overlap 189638 TGGTTCTGTCGAAAA GACCGAAAA CCCT TTTTCGGGC ATTGGCTGACAACAC TERM 149 189776 - 189738 - H 87 -15.3 -3.60627 | gap 1, opp_overlap 189738, overlap 189766 CGAGGGCAGCGCAAA GGCCGCCCCCGTGTCCCC CCTC AAAG-CACGGAGGCGGCC TTCGCTAGGGAACGG Tfu_0164 190024 - 190854 + | hypothetical protein Tfu_0165 191249 - 190824 - | hypothetical protein TERM 150 191276 - 191333 + r 100 -23.4 -3.37732 | gap 1, overlap 191260 191259 191278 191308 191316 GGCTTCGACCTCGTG ATCGGACCCGGTTGTCCGGCGG-CACC GCCCA GGAGGCCGCCGGACAACCGGGCCCGTG TTCTCCGCTTCCTCT TERM 151 191278 - 191331 + r 100 -30.4 -3.25459 | gap 1, overlap 191260 191259 191276 191308 191316 CTTCGACCTCGTGAT CGGACCCGGTTGTCCGGCGG-CACC GCCCA GGAGGCCGCCGGACAACCGGGCCCG TGTTCTCCGCTTCCT Tfu_0166 192951 - 191410 - | cell wall biosynthesis glycosyltransferase TERM 152 193553 - 193532 - g 70 -8.7 -3.93695 | overlap 193533 CGGATCATGGACAAA TCGGTGAAC AATA GTTCACCGT GGTGGGAGAAACACA Tfu_0167 193241 - 194029 + | hypothetical protein Tfu_0168 194123 - 194836 + | hypothetical protein TERM 153 195830 - 195806 - g 74 -12.1 -3.61398 | GTCGCTCGCCAAGAA GCTCATCGGCT ACG AGCCGACGCGC CGCCTCGACGACATC Tfu_0169 194919 - 195878 + | nucleoside-diphosphate-sugar epimerase (UDP-glucose 4-epimerase) TERM 154 195925 - 195889 - T 100 -24.5 -2.88544 | overlap 195892 CCTGACCGGCAGAGA CCACGGTGGCCCCTGGA ACT TCCAGGGGCCACCGCCG GTTACGCGGGAAAAG TERM 155 195922 - 195892 - T 100 -27 -2.69468 | overlap 195889 GACCGGCAGAGACCA CGGTGGCCCCTGGA ACT TCCAGGGGCCACCG CCGGTTACGCGGGAA Tfu_0170 196280 - 195927 - | hypothetical protein Tfu_0171 196651 - 196277 - | hypothetical protein Tfu_0172 196770 - 197234 + | thioredoxin Tfu_0173 198060 - 197344 - | hypothetical protein hisG 198921 - 198067 - | ATP phosphoribosyltransferase hisE 199267 - 199004 - | phosphoribosyl-ATP pyrophosphatase Tfu_0176 200111 - 199389 - | putative short chain dehydrogenase Tfu_0177 200744 - 200301 - | hypothetical protein TERM 156 200479 - 200441 - G 76 -7.2 -4.30576 | overlap 200443 CGTGCATGAGGAAAA TACCCCGACCTGACTCAG AAT CTGGAGCAGGGCGGGGCG GGGCGATCGTCGGAG TERM 157 200477 - 200443 - G 78 -12 -3.7574 | overlap 200441 TGCATGAGGAAAATA CCCCGACCTGACTCAG AAT CTGGAGCAGGGCGGGG CGGGGCGATCGTCGG Tfu_0178 201096 - 200854 - | phosphoribosylformylglycinamidine synthase subunit PurS TERM 158 201344 - 201376 + H 81 -16.3 -2.64155 | opp_overlap 201340 201339, overlap 201340 CTACGGATAAGGCCT TCCGGGGCGTCGC GGCGGTG GCGACGCCGCGGA TCACTTTGGAAGAGA Tfu_0179 201549 - 202148 + | RNA polymerase sigma factor RpoE Tfu_0180 202416 - 203633 + | pyruvate dehydrogenase (lipoamide) Tfu_0181 203630 - 204613 + | putative branched-chain alpha keto acid dehydrogenase E1 beta subunit Tfu_0182 204624 - 205964 + | branched-chain alpha-keto acid dehydrogenase subunit E2 TERM 159 205979 - 206027 + F 100 -23.1 -3.68222 | overlap 205981 205983 205984 ATCGGCCTTGCCGGT GCGTGAGGCCCTGGGCACTGGAG GTC CTCCAGTGCCCAGGGCCGGTCTC TTATTCCGATTCAGC TERM 160 205981 - 206025 + F 100 -24.3 -3.42069 | overlap 205979 205983 205984 CGGCCTTGCCGGTGC GTGAGGCCCTGGGCACTGGAG GTC CTCCAGTGCCCAGGGCCGGTC TCTTATTCCGATTCA TERM 161 205983 - 206023 + F 100 -25.5 -3.2756 | overlap 205981 205979 205984 GCCTTGCCGGTGCGT GAGGCCCTGGGCACTGGAG GTC CTCCAGTGCCCAGGGCCGG TCTCTTATTCCGATT TERM 162 205984 - 206022 + F 100 -29 -2.55813 | overlap 205983 205981 205979 CCTTGCCGGTGCGTG AGGCCCTGGGCACTGGAG GTC CTCCAGTGCCCAGGGCCG GTCTCTTATTCCGAT Tfu_0183 206397 - 207149 + | DNA polymerase III subunit epsilon TERM 163 207223 - 207203 - f 77 -9 -4.32857 | opp_overlap 207202 207199 CTGCGGAAACAGAAA GGTGCACA CTCGT CGTGCACC GTGCTTGTAGAGGGG TERM 164 208230 - 208242 + G 82 -4.1 -5.0538 | GGGCGCGGTGGCCAC GTTCT TCC AGGAC TTTTTTGAGATGGCG Tfu_0184 207217 - 209025 + | BCCT transporter Tfu_0185 209806 - 209081 - | preprotein translocase YidC subunit Tfu_0186 210253 - 209915 - | hypothetical protein Tfu_0187 210474 - 210806 + | hypothetical protein Tfu_0188 211435 - 210803 - | 2-keto-3-deoxy-phosphogluconate aldolase Tfu_0189 212459 - 211440 - | PfkB family carbohydrate kinase Tfu_0190 213329 - 212622 - | cell wall-associated hydrolase (invasion-associated proteins) TERM 165 212785 - 212769 - G 89 -7.9 -4.91109 | overlap 212771 CCCGGAGTAGAAAAA GACCAGG TCA CCTGGGC GGAGCTGGGAACGGG TERM 166 212783 - 212771 - G 72 -9.1 -4.08042 | overlap 212769 CGGAGTAGAAAAAGA CCAGG TCA CCTGG GCGGAGCTGGGAACG Tfu_0191 213732 - 214541 + | N-acetylglutamate synthase and related acetyltransferase TERM 167 214550 - 214598 + T 100 -24.7 -2.52464 | opp_overlap 214553 CCTGTAAGCCGCATC CAACGGTGAGGGGGGTGGAACAT GGC ACGTTCCACCCCCCTCACCGTGC TGCGTTACGGCACGC TERM 168 214595 - 214553 - T 100 -33 -3.06831 | opp_overlap 214550 GTAAGCCGCATCCAA CGGTGAGGGGGGTGGAACAT GGC ACGTTCCACCCCCCTCACCG TGCTGCGTTACGGCA Tfu_0192 215782 - 214616 - | hypothetical protein Tfu_0193 216044 - 216661 + | carbonic anhydrase/acetyltransferase isoleucine patch superfamily protein TERM 169 217136 - 217163 + F 75 -14.1 -2.95491 | opp_overlap 217127 217125 AGAACACCCAGGCGG CGCTCCGGCGG GGCAGG CCGACGGAGCG TATCTCGTGCAGTTT TERM 170 217799 - 217779 - f 70 -2.4 -4.59853 | overlap 217781 GGAAGGCGGTAAAAA CGCCTCGC GGCTG GGGAGGTG CGGCCAGAAGGCTGA TERM 171 218184 - 218169 - f 74 -5.4 -4.56597 | gap 1, opp_overlap 218169 TCCGCGGTTGAAAAA TGGTCCC GAT GGG-CCA TGGTCTGTCGGCTAC Tfu_0194 218298 - 218522 + | hypothetical protein TERM 172 218872 - 218930 + T 86 -15.6 -3.28712 | opp_overlap 218880, overlap 218873 CTCACCGGCGCCGTA GCGCACAAGGGCCGCGGACGCCGGGGCG GAT CACCCCGACGGCCGCGGCCCCGATCCGG TTGTGCCGGAAGCCC TERM 173 218873 - 218929 + T 89 -19.1 -2.57132 | opp_overlap 218880, overlap 218872 TCACCGGCGCCGTAG CGCACAAGGGCCGCGGACGCCGGGGCG GAT CACCCCGACGGCCGCGGCCCCGATCCG GTTGTGCCGGAAGCC TERM 174 218922 - 218880 - T 100 -32 -3.32844 | opp_overlap 218873 218872 CGCCGTAGCGCACAA GGGCCGCGGACGCCGGGGCG GAT CACCCCGACGGCCGCGGCCC CGATCCGGTTGTGCC Tfu_0195 221111 - 218961 - | putative iron-sulphur-binding reductase dnaK 221550 - 223391 + | molecular chaperone DnaK Tfu_0197 223425 - 224219 + | molecular chaperone GrpE (heat shock protein) TERM 175 224268 - 224237 - f 100 -20.2 -3.41051 | overlap 224238 CGAGCGGTAGGAGAA GGGGTGTCCCAGGC TCGG GCCTGGGACACCCG ACTCAGTCACCACTG TERM 176 224267 - 224238 - f 100 -23.7 -2.64416 | overlap 224237 GAGCGGTAGGAGAAG GGGTGTCCCAGGC TCGG GCCTGGGACACCC GACTCAGTCACCACT Tfu_0198 224240 - 225454 + | heat shock protein DnaJ Tfu_0199 225460 - 225903 + | regulatory protein, MerR TERM 177 225906 - 225930 + F 87 -18.5 -2.71731 | overlap 225910 CGAGTCGCAGTAGTA GCCCTGGGCCG CCC CGGCCCCGGGC TCCTTCGAGCCTCCG TERM 178 225910 - 225958 + F 77 -13 -3.39187 | gap 1, overlap 225906 TCGCAGTAGTAGCCC TGGGCCGCCCCGGCCCCGGGCTC CTTC GAGCCTCCGGC-GGGGCAGCGCA TTCGTCTTACCTGTT Tfu_0200 226000 - 228603 + | ATPase TERM 179 228614 - 228655 + F 100 -26.8 -5.24129 | opp_overlap 228605 CATAAGCGGTGACCG TAACCGGGGGCGGTGACA TGCCGT TGTCACCGCCCCCGGTTG TTTTTTCTGCCCCGG Tfu_0201 228887 - 229081 + | hypothetical protein Tfu_0202 229899 - 229336 - | hypothetical protein Tfu_0203 230236 - 231198 + | coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductase Tfu_0204 231243 - 232298 + | hypothetical protein Tfu_0205 232298 - 233101 + | hypothetical protein TERM 180 234086 - 234076 - gT 71 -2.4 -4.56597 | GCGCTCGGCGAAAAA CTGG GTG CCGG TATCGCGGAGCTCAT Tfu_0207 235642 - 234281 - | putative transcriptional regulator Tfu_0206 233098 - 234393 + | aminotransferase Tfu_0208 236392 - 235958 - | hypothetical protein Tfu_0209 236555 - 237076 + | hypothetical protein TERM 181 237652 - 237634 - g 70 -8.8 -3.85864 | overlap 237644 237645 CGAGCAGCAGAAGAA GTTCGCCA AAC TGGCGATC GAGCGCGGCTGGGGC Tfu_0210 237191 - 239014 + | putative acyl-CoA dehydrogenase TERM 182 239034 - 239059 + T 100 -23.3 -3.76373 | opp_overlap 239034 GCCCGCATGCACCAA CGGCGGGGGCC GTAC GGCCCCCGCCG TTTCACTCTTCCGGC TERM 183 239059 - 239034 - T 100 -23.3 -3.18264 | opp_overlap 239034 GCCCGCATGCACCAA CGGCGGGGGCC GTAC GGCCCCCGCCG TTTCACTCTTCCGGC Tfu_0211 240729 - 239062 - | hypothetical protein TERM 184 240672 - 240630 - G 75 -5.5 -4.66609 | gap 2, opp_overlap 240646, overlap 240635 CATGTGAGCGAAAAA CGGAACGCCGCAACCCGACGC CGG GCGCCCGGCC-CGG-ATCCCG ACAGTCTCTTGGCGC cysS 240817 - 242217 + | cysteinyl-tRNA synthetase Tfu_0213 242293 - 243267 + | RNA methyltransferase TrmH, group 3 Tfu_0214 243597 - 244430 + | site-specific recombinase XerD TERM 185 244476 - 244513 + T 90 -15.5 -3.57561 | opp_overlap 244476 244483, overlap 244483 CGGTTTCGGAACGAA GTGCAAAGCCCCGACCC GCAT GGGCCGGGGCTTTTCCC TTTACGGGCTTAGAG TERM 186 244513 - 244476 - T 93 -17.7 -3.33696 | opp_overlap 244476 244483, overlap 244483 CGGTTTCGGAACGAA GTGCAAAGCCCCGACCC GCAT GGGCCGGGGCTTTTCCC TTTACGGGCTTAGAG TERM 187 244506 - 244483 - T 93 -17.4 -3.69434 | opp_overlap 244476 244483, overlap 244476 GGAACGAAGTGCAAA GCCCCGACCC GCAT GGGCCGGGGC TTTTCCCTTTACGGG TERM 188 244483 - 244506 + T 100 -15.2 -4.35524 | opp_overlap 244483 244476, overlap 244476 GGAACGAAGTGCAAA GCCCCGACCC GCAT GGGCCGGGGC TTTTCCCTTTACGGG Tfu_0215 244714 - 244532 - | hypothetical protein Tfu_0216 245561 - 244725 - | helix-hairpin-helix DNA-binding motif-containing protein Tfu_0217 245764 - 246144 + | hypothetical protein TERM 189 246768 - 246806 + T 100 -11 -4.79352 | opp_overlap 246773 246787, overlap 246770 246773 GGCACACACCGGTCA CCTAAGGCCCGTCCAC ACATCCG GTGGACGGGCCTTGCC TTTTCTTATAGGTCG TERM 190 246770 - 246804 + T 87 -18 -2.6741 | opp_overlap 246773 246787, overlap 246768 246773 CACACACCGGTCACC TAAGGCCCGTCCAC ACATCCG GTGGACGGGCCTTG CCTTTTCTTATAGGT TERM 191 246773 - 246801 + T 93 -17.5 -3.4724 | opp_overlap 246773 246787, overlap 246770 246768 ACACCGGTCACCTAA GGCCCGTCCAC ACATCCG GTGGACGGGCC TTGCCTTTTCTTATA TERM 192 246801 - 246773 - T 88 -17.5 -3.05935 | opp_overlap 246773 246770 246768, overlap 246787 ACACCGGTCACCTAA GGCCCGTCCAC ACATCCG GTGGACGGGCC TTGCCTTTTCTTATA TERM 193 246878 - 246857 - T 100 -17.3 -4.70879 | CCCAAACGCGAAAAA GCTCCCCGC ATAC GCGGGGAGC ACGGCGCGGTCAGCG Tfu_0218 247345 - 247073 - | hypothetical protein Tfu_0219 247449 - 247931 + | hypothetical protein TERM 194 248285 - 248271 - f 75 -4.2 -4.7078 | opp_overlap 248277 CCAAGCATTCAAAAA GCCAAG CTC CTTTGC GGGGGAATTTTTACC Tfu_0220 248360 - 249379 + | putative secreted esterase Tfu_0221 250619 - 249369 - | subtilisin-like serine protease Tfu_0222 251535 - 250690 - | hypothetical protein TERM 195 251595 - 251579 - H 78 -10.1 -3.96892 | AATCGCTACGATAAA TCGCCCG ATC CGGACGA TGGAGGGCGGTCAAT Tfu_0223 251609 - 251926 + | hypothetical protein Tfu_0224 252001 - 252876 + | trehalose-phosphatase Tfu_0225 254558 - 253119 - | alpha,alpha-trehalose-phosphate synthase (UDP-forming) Tfu_0226 254958 - 256244 + | threonine synthase Tfu_0227 256314 - 256592 + | hypothetical protein TERM 196 256610 - 256648 + F 100 -27.6 -4.82901 | overlap 256585 GGGACCCGTGTCGTG CAGGTGTGGTCGGGGTGT GAC ACGCCCCGGCCACACCTG TTTTTCTGGGAGCGG groEL 256923 - 258548 + | chaperonin GroEL TERM 197 258573 - 258599 + T 100 -19.5 -5.34555 | opp_overlap 258565, overlap 258564 TACTACACGTCCACT GGGGACGGTCC CTTCC GGACCGTCCCC TTTTTTGTGCTGTGG Tfu_0229 259061 - 258636 - | putative MutT family protein Tfu_0230 259194 - 259505 + | hypothetical protein Tfu_0231 259953 - 259546 - | hypothetical protein Tfu_0232 260422 - 260015 - | hypothetical protein Tfu_0233 260734 - 260468 - | hypothetical protein TERM 198 261091 - 261135 + H 88 -10 -4.41047 | gap 1, overlap 261093 261096 261101 ACGCGCGGGCGGCCG CAAGCGGAGAGGCCCGGAACA CAGT TTTTCCGGGCCTCT-CGTCCG TTTTCGTTAGCAGCT TERM 199 261096 - 261131 + H 80 -16.2 -2.80479 | overlap 261093 261091 261101 CGGGCGGCCGCAAGC GGAGAGGCCCGGAACA CAGT TTTTCCGGGCCTCTCG TCCGTTTTCGTTAGC Tfu_0234 261374 - 261757 + | cold-shock DNA-binding protein family protein TERM 200 261801 - 261772 - f 100 -25.1 -3.05935 | opp_overlap 261767 261764 ACACCCCGCACGCAA CGCGCCCTGTGGC GTCC GCCACAGGGCGCG TCCACACTTCTCAGG Tfu_0235 261894 - 262712 + | hypothetical protein TERM 201 262755 - 262700 - f 93 -19.7 -2.82623 | gap 2, overlap 262697 CTCCTCTGACAAGCA GGCCCGGCAGTGACGTGGGGCCTGGCA GCAC CGCCGGGCCCCACG-C-CTGCCGCGGC GGCAGCGCGGTGTCG TERM 202 263062 - 263085 + G 70 -12.4 -3.28712 | opp_overlap 263053, overlap 263054 CAGAACCCCCGGATG CTCCGCGTCG TCTG CGACGGGGAG TTCTACGCACGCAAA Tfu_0236 262990 - 263649 + | hypothetical protein Tfu_0237 266744 - 263655 - | hypothetical protein TERM 203 263941 - 263906 - G 77 -14.6 -3.14564 | overlap 263886 GCACCTCTTCAGGAA CAGGGCGGGCCTCCCC AGTC GAGGTGACCCGGCCTG CCACCACTTCGGAGG Tfu_0238 268272 - 266788 - | hypothetical protein Tfu_0239 268655 - 268311 - | hypothetical protein TERM 204 268813 - 268838 + G 78 -8.3 -4.25283 | gap 1, opp_overlap 268830 TCTACCCCAGTTGCG CCGGTGCCGC CCACGAA GCG-CACCGG TTTTGCTGCCGCGCT Tfu_0240 268786 - 270267 + | putative xanthine/uracil permease TERM 205 270281 - 270317 + F 91 -17.3 -3.2964 | overlap 270284 AAGCCCGCAAGTCCG CTTCGGCGTCCCATTCC GTC GGGATGGGACGCCGTAC TTGTACGCACACTTT TERM 206 270284 - 270314 + F 100 -23.4 -2.82623 | overlap 270281 CCCGCAAGTCCGCTT CGGCGTCCCATTCC GTC GGGATGGGACGCCG TACTTGTACGCACAC Tfu_0241 270407 - 270862 + | regulatory protein, MarR Tfu_0242 271001 - 272275 + | putative integral membrane efflux protein Tfu_0243 272275 - 272823 + | 2',5' RNA ligase Tfu_0244 273047 - 274111 + | hypothetical protein TERM 207 274193 - 274153 - T 100 -21.9 -2.70932 | GGGCCCCGGTAACGA CGGCTCAGGACGCGCCG GTTGCCG CAGCGCGGCCTGAGCCG GGACGAGACAGAGTC Tfu_0245 275215 - 274217 - | glycerophosphoryl diester phosphodiesterase Tfu_0246 276437 - 275316 - | phosphoserine aminotransferase TERM 208 276572 - 276544 - R 100 -21.1 -3.32022 | CGCGCGACACACGAA GTGAACCCCGGCC GGT GACCGGGGTTCAC GAGTGTGCGAAACCA Tfu_0247 277701 - 276595 - | citrate synthase 2 TERM 209 277618 - 277632 + g 77 -11.4 -3.92522 | overlap 277617 GACACCCCGGTACCG GAGGGC GCC GCCCTC TTTGTCCGGTTCGGC Tfu_0248 277842 - 278507 + | pyridoxamine 5'-phosphate oxidase Tfu_0249 278761 - 279471 + | iron dependent repressor Tfu_0250 279658 - 281919 + | PAS containing protein phosphatase 2C-like Tfu_0251 282980 - 281979 - | ribonuclease BN Tfu_0252 283233 - 283063 - | hypothetical protein TERM 210 283441 - 283412 - H 95 -15.7 -4.09739 | opp_overlap 283439 GCAACGGCGTGAAAA GGAGCGGGTGCAA CGGG TTGCCCCCGCCCC TCAACCGAATATCGT Tfu_0253 283496 - 284638 + | acetyl-CoA acetyltransferase Tfu_0254 285890 - 284679 - | hypothetical protein TERM 211 285437 - 285491 + g 83 -15.7 -3.61398 | gap 2, overlap 285439 285440 CGACTTGGCGGGCGG TGACCGGACC-GGTCCGGGC-GACCTC GTC GAGGACCGCCCGGACCAGTTCCGGGTG TTCTTCCCCGGCGCG TERM 212 285439 - 285489 + g 89 -18.3 -3.38812 | gap 2, overlap 285437 285440 ACTTGGCGGGCGGTG ACCGGACC-GGTCCGGGC-GACCTC GTC GAGGACCGCCCGGACCAGTTCCGGG TGTTCTTCCCCGGCG TERM 213 285440 - 285488 + g 85 -21.8 -2.63073 | gap 2, overlap 285439 285437 CTTGGCGGGCGGTGA CCGGACC-GGTCCGGGC-GACCTC GTC GAGGACCGCCCGGACCAGTTCCGG GTGTTCTTCCCCGGC Tfu_0255 286440 - 285922 - | hypothetical protein Tfu_0256 288229 - 286805 - | signal transduction histidine kinase Tfu_0257 288951 - 288226 - | response regulator receiver Tfu_0258 289275 - 290069 + | exodeoxyribonuclease III Tfu_0259 290106 - 290993 + | ribokinase TERM 214 291062 - 291031 - T 100 -25.2 -2.85351 | overlap 291033 GTGCCCGACAGCAGA CAGCCCTGCCCCGG CAGA CCGGGGCAGGGCCG GTGTGCGGTCTCCCG TERM 215 291060 - 291033 - T 100 -24.2 -2.97747 | overlap 291031 GCCCGACAGCAGACA GCCCTGCCCCGG CAGA CCGGGGCAGGGC CGGTGTGCGGTCTCC Tfu_0260 291710 - 291087 - | hypothetical protein Tfu_0261 291938 - 293980 + | hypothetical protein TERM 216 294057 - 294084 + T 70 -11.2 -3.4052 | opp_overlap 294053 294057, overlap 294053 CCTGAATCCAACGAA CCGCTGTGGCTG CCCG CAGCCGGGGCGG TTCATTGGATTCAGA Tfu_0262 294630 - 294442 - | hypothetical protein Tfu_0263 294974 - 294627 - | putative DNA-binding protein Tfu_0264 295438 - 294998 - | helix-hairpin-helix DNA-binding motif-containing protein TERM 217 295634 - 295597 - H 95 -12.7 -4.42062 | gap 1, overlap 295598 GATCTGTCAAACAAA CGGCCCTGGC-CGGCG TCGCGAC CGCCGAACCAGGGCCT TAGCCTCCAACCTTC TERM 218 295633 - 295598 - H 86 -16.2 -3.24755 | gap 1, overlap 295597 ATCTGTCAAACAAAC GGCCCTGGC-CGGCG TCGCGAC CGCCGAACCAGGGCC TTAGCCTCCAACCTT Tfu_0265 295713 - 296204 + | hypothetical protein Tfu_0266 296341 - 296664 + | hypothetical protein Tfu_0267 296910 - 297866 + | hypothetical protein TERM 219 297901 - 297885 - T 80 -13.7 -3.36515 | overlap 297883 297899 CGGGATCGGGAAAGA CGGTCGG AAA CCGACCG GAAATTGACCGGAAA Tfu_0268 298615 - 297917 - | hypothetical protein TERM 220 298650 - 298611 - G 85 -16.4 -3.60587 | gap 1, overlap 298602 298613 298615 298633 AGAAAATTCACATAA CACACGTGGGCCGCCCCAA AAA CCGGGACGGCCCACGGG-G AAGCGGAAGACGGCT TERM 221 298649 - 298613 - G 91 -20.1 -3.36656 | overlap 298611 298602 298615 298633 AAAATTCACATAACA CACGTGGGCCGCCCCAA AAA CCGGGACGGCCCACGGG GAAGCGGAAGACGGC TERM 222 298647 - 298615 - R 100 -21.3 -3.23734 | overlap 298613 298611 298602 298633 AATTCACATAACACA CGTGGGCCGCCCCAA AAA CCGGGACGGCCCACG GGGAAGCGGAAGACG Tfu_0269 300394 - 298664 - | arginyl-tRNA synthetase Tfu_0270 301760 - 300444 - | hypothetical protein Tfu_0271 302904 - 301822 - | phosphate:acyl-[acyl carrier protein] acyltransferase TERM 223 302575 - 302553 - G 79 -19.2 -2.62184 | overlap 302568 TGGCGGTGGAGACCA CTCCGCCGGT AGA ACCGGCGGAG ACGAGGGCAGCGGCG TERM 224 302659 - 302700 + g 74 -15.9 -2.71364 | gap 1 CCAGGCGGCGAGCGC CCCCTCGTGCATGGCCAAGG CTT CCTCGGC-GTGCACGATGGG TAGTTCCCGGGCTGC Tfu_0272 303287 - 304648 + | L-lysine 2,3-aminomutase Tfu_0273 305710 - 304625 - | glucokinase Tfu_0274 306550 - 305720 - | hypothetical protein Tfu_0275 306878 - 307651 + | putative short chain dehydrogenase Tfu_0276 307663 - 308427 + | enoyl-CoA hydratase Tfu_0277 309411 - 308503 - | surface protein TERM 225 309685 - 309653 - R 90 -16.4 -3.36452 | gap 1 AGGCTGCAACAGCAA GGGACCGGAAAG-GC TGTC GCACCTTCCGGTCCC GGAAAGACGAGGGTG Tfu_0278 311102 - 309714 - | hypothetical protein TERM 226 310766 - 310752 - G 72 -3.5 -4.56597 | overlap 310755 GCTGGTGGTGAAAAA GACCC GGTTG AGGTC TCCCGGCGCCAGGTC TERM 227 311252 - 311266 + H 75 -4.2 -4.62002 | GAAACGCGATATTTA CAACGG AAT CCCTTG TTTTGTGTCGTTGGT Tfu_0279 311344 - 312798 + | betaine-aldehyde dehydrogenase TERM 228 312931 - 312914 - g 87 -5.5 -5.1101 | gap 1 CCACGACGGAAAAAA CACC-GGC CGC GCCTGGCG TAGTAGCGACAGAGA TERM 229 313200 - 313165 - g 76 -14 -3.53012 | opp_overlap 313161 CGCCTGTCCGGTAAA GACGTCACCGGGGTTC CCCC GAACCGCCGCGACGTC AACATGGTCTTCCAA Tfu_0280 312892 - 314046 + | spermidine/putrescine ABC transporter ATP-binding subunit Tfu_0281 314100 - 315338 + | putative polyamine-binding lipoprotein Tfu_0282 315345 - 316208 + | polyamine ABC-transporter, inner membrane subunit Tfu_0283 316205 - 317029 + | polyamine ABC-transporter, inner membrane subunit Tfu_0284 317069 - 318490 + | putative oxidoreductase Tfu_0285 319159 - 318539 - | response regulator receiver TERM 230 319049 - 319092 + g 73 -16.8 -2.52464 | gap 1, overlap 319050 CTTCAACGCGGCCTC ACCTGAGTTCGCACGGACCAG GTT CTGGTCCA-GCGAGCTCAGGA TGGCTTCGAGGGCGG Tfu_0286 323382 - 319162 - | GAF sensor hybrid histidine kinase TERM 231 322416 - 322432 + g 76 -2.1 -4.7373 | overlap 322409 322408 GGAGCATTTCGCCTT GGACGTC CAC GGTGACC TTTTTGGTGAGGTCG TERM 232 322692 - 322708 + g 76 -2.1 -4.7373 | overlap 322685 322684 GGAGCATTTCGCCTT GGACGTC CAC GGTGACC TTTTTGGTGAGGTCG Tfu_0287 323675 - 325906 + | protein phosphatase 2C-like protein Tfu_0288 326573 - 325968 - | LuxR response regulator receiver Tfu_0289 327841 - 326570 - | putative two-component system sensor kinase Tfu_0290 328771 - 327914 - | putative integral membrane protein Tfu_0291 329778 - 328804 - | ABC-type multidrug transport system ATPase component TERM 233 329858 - 329845 - R 81 -8.1 -4.56597 | CTCCCCGGTGAAAAA CCCAC GGCA GTGGG GTTGACAAATGTCAA Tfu_0292 331067 - 329916 - | PAS Tfu_0293 331295 - 332044 + | hypothetical protein Tfu_0294 332307 - 332678 + | anti-sigma factor antagonist Tfu_0295 334117 - 332876 - | hypothetical protein TERM 234 334607 - 334593 - H 77 -12.8 -3.31144 | GGGGGAGGGGCAGAA CGCGGG CTG CCCGCG TGGGCGGCGCGGAGG Tfu_0296 334783 - 335232 + | hypothetical protein Tfu_0297 335442 - 336206 + | protein phosphatase 2C-like Tfu_0298 336903 - 336271 - | Cu resistance protein CopC TERM 235 336977 - 336989 + r 83 -6.2 -4.90525 | opp_overlap 336947 GGGCCGCAGTCGCGT CGGG AGGTG CCCG TTTTCTTTGACGTTA TERM 236 337047 - 337098 + r 72 -11.7 -3.48593 | gap 2, opp_overlap 337052, overlap 337049 CCGCGGTTGTTGCAG C-AC-AATGCGCGAGCCGCCAGG CCTGACCA CCTGGCGGCTCGCGGAATCGTCG TTGTGTGGCAGAGTC TERM 237 337049 - 337095 + r 77 -14.5 -2.88822 | gap 1, opp_overlap 337052, overlap 337047 GCGGTTGTTGCAGCA C-AATGCGCGAGCCGCCAGG CCTGACCA CCTGGCGGCTCGCGGAATCG TCGTTGTGTGGCAGA TERM 238 337091 - 337052 - R 100 -21.5 -3.40403 | opp_overlap 337049 337047 GTTGTTGCAGCACAA TGCGCGAGCCGCCAGGC CTGACC ACCTGGCGGCTCGCGGA ATCGTCGTTGTGTGG Tfu_0299 337378 - 337112 - | regulatory protein Tfu_0300 338033 - 338605 + | putative acetyltransferase Tfu_0301 338679 - 339944 + | diaminobutyrate--2-oxoglutarate aminotransferase ectC 340103 - 340507 + | L-ectoine synthase TERM 239 341392 - 341360 - g 78 -16.3 -3.09933 | opp_overlap 341342, overlap 341332 341390 TTCGAAGTCACCGAA GGCTTCATCCCCGTC GTG GACGGGGAAGAAGTC ACCCCTGCCGGCGGT Tfu_0303 340679 - 341569 + | extracellular solute-binding Tfu_0304 341584 - 342306 + | amino acid ABC transporter, inner membrane subunit Tfu_0305 342303 - 342941 + | amino acid ABC transporter, inner membrane subunit Tfu_0306 342928 - 343731 + | ABC-type polar amino acid transport system ATPase component TERM 240 343883 - 343825 - f 86 -14.5 -3.53224 | gap 1, overlap 343826 343876 TACTGTTGGGGGAAA CCGTCGTCACCACCGTCCTGCGCCGGGA CCGG TCCCGGCGCAGGACCAAAGTGGCGCCA- CGCAAAACACGGTGA TERM 241 343883 - 343826 - f 93 -20.5 -2.71791 | overlap 343825 343876 ACTGTTGGGGGAAAC CGTCGTCACCACCGTCCTGCGCCGGGA CCGG TCCCGGCGCAGGACCAAAGTGGCGCCA CGCAAAACACGGTGA Tfu_0307 344525 - 344725 + | hypothetical protein Tfu_0308 344716 - 345510 + | hypothetical protein Tfu_0309 345507 - 347012 + | cobyric acid synthase Tfu_0310 347009 - 347755 + | precorrin-6A reductase TERM 242 347868 - 347896 + T 93 -18.9 -3.12351 | opp_overlap 347868 CTCTCGAGCAGCCAA GCCCTGCACTGTG AGG CTCAGTGCAGGGC TTGGCTGTGACGAGC TERM 243 347896 - 347868 - T 93 -18.9 -3.09516 | opp_overlap 347868 CTCTCGAGCAGCCAA GCCCTGCACTGTG AGG CTCAGTGCAGGGC TTGGCTGTGACGAGC Tfu_0311 349405 - 347981 - | cobyrinate a,c-diamide synthase / hydrogenobyrinic acid a,c-diamide synthase (glutamine-hydrolysing) Tfu_0312 350009 - 349395 - | cob(I)yrinic acid a,c-diamide adenosyltransferase Tfu_0313 352030 - 350009 - | protoporphyrin IX magnesium-chelatase TERM 244 351671 - 351682 + g 81 -7.2 -4.61231 | GTATTCGACACCGCT GCCC GACA GGGC TTTTTCCAGGTGTAG TERM 245 352071 - 352058 - H 85 -8.1 -4.59773 | opp_overlap 352068 GGGGATCGGCAAAAA CGGCA GCCA TGCCG AGGCCGGTCTTCGGA Tfu_0314 352324 - 353541 + | precorrin-6Y C5,15-methyltransferase (decarboxylating) Tfu_0315 353538 - 354308 + | precorrin-4 C11-methyltransferase Tfu_0316 356099 - 354564 - | precorrin-2 C20-methyltransferase / precorrin-3 methyltransferase cobH 356770 - 356096 - | precorrin-8X methylmutase Tfu_0318 358086 - 356767 - | cobalamin biosynthesis protein CobG, precorrin-3B synthase cobN 358269 - 361898 + | cobaltochelatase Tfu_0320 361895 - 362683 + | precorrin 6A synthase Tfu_0321 362776 - 363249 + | hypothetical protein Tfu_0322 363673 - 363317 - | hypothetical protein Tfu_0323 363814 - 365922 + | polyphosphate kinase Tfu_0324 365915 - 366892 + | putative MutT family protein TERM 246 367176 - 367150 - g 70 -8.6 -3.89291 | overlap 367173 GGAATACGAGAAGAA CCGGCGCATCGC CTG GCGACACATCGG CCCGCACCGCTGGCG Tfu_0325 366920 - 367363 + | hypothetical protein Tfu_0326 368480 - 367422 - | ABC-type spermidine/putrescine transport systems ATPase components Tfu_0327 369298 - 368477 - | molybdate ABC transporter, inner membrane subunit Tfu_0328 370043 - 369276 - | molybdenum ABC transporter, periplasmic binding protein TERM 247 369759 - 369722 - G 78 -17.7 -2.73875 | opp_overlap 369680, overlap 369719 TGCGCGCGAACACCA CCGGTTCGTCGGCGACG CCGA CGTCAGCGACGACCCGG TCCATGGTGGCCTGG Tfu_0329 370304 - 371611 + | signal transduction histidine kinase Tfu_0330 371614 - 372273 + | LuxR response regulator receiver Tfu_0331 372308 - 373231 + | hypothetical protein Tfu_0332 373371 - 374087 + | putative integral membrane protein Tfu_0333 374619 - 374131 - | anti-sigma factor antagonist Tfu_0334 377200 - 374861 - | hypothetical protein Tfu_0335 377895 - 377287 - | hypothetical protein Tfu_0336 378713 - 377892 - | ABC-type cobalamin/Fe3+-siderophores transport systems ATPase components TERM 248 378389 - 378378 - G 81 -7.2 -4.57569 | CCACTGCCGCAAAAA CCGC TGGT GCGG GTAGCGGCCCCGGGA TERM 249 378561 - 378521 - G 75 -16.2 -2.90075 | TGCCGTCCAAGTACA CCGCGCCC-GTCGTCGGACG GAT CATCCG-CGACAGGGCGCGC AGCAGAGTGGACTTG Tfu_0337 379770 - 378730 - | ABC-type enterobactin transport system inner membrane subunit Tfu_0338 380867 - 379767 - | ABC-type Fe3+-siderophore transport system inner membrane subunit Tfu_0339 382222 - 381023 - | hypothetical protein Tfu_0340 384604 - 382274 - | trimethylamine-N-oxide reductase (cytochrome c) Tfu_0341 384732 - 385688 + | citryl-CoA lyase Tfu_0342 386150 - 385725 - | hypothetical protein Tfu_0343 386292 - 386990 + | response regulator receiver Tfu_0344 386990 - 388429 + | signal transduction histidine kinase TERM 250 388494 - 388458 - T 100 -26 -2.69151 | opp_overlap 388461, overlap 388461 CCGCTCGAGACACCA CAAGGCCGCAGACGGG GTGGA CCCGTCCGCGGCCTTG GTACTAGCTGCTCAC TERM 251 388491 - 388461 - T 100 -21.9 -3.49777 | opp_overlap 388461, overlap 388458 CTCGAGACACCACAA GGCCGCAGACGGG GTGGA CCCGTCCGCGGCC TTGGTACTAGCTGCT TERM 252 388461 - 388491 + T 100 -19.7 -3.22476 | opp_overlap 388461 388458 CTCGAGACACCACAA GGCCGCAGACGGG GTGGA CCCGTCCGCGGCC TTGGTACTAGCTGCT Tfu_0345 388873 - 388526 - | putative monovalent cation/H+ antiporter subunit G Tfu_0346 389160 - 388870 - | putative cation antiporter subunit Tfu_0347 389732 - 389157 - | putative monovalent cation/H+ antiporter subunit E Tfu_0348 391372 - 389729 - | putative monovalent cation/H+ antiporter subunit D Tfu_0349 392184 - 391372 - | putative monovalent cation/H+ antiporter subunit C Tfu_0350 395129 - 392181 - | putative monovalent cation/H+ antiporter subunit A TERM 253 395155 - 395167 + H 76 -9.1 -4.16921 | opp_overlap 395149, overlap 395162 CCTCACAATGGTCGA TCCGG TTG CCGGA TTTTCCGCCTTCTTA Tfu_0351 395304 - 395693 + | helix-turn-helix, Fis-type Tfu_0352 395930 - 396940 + | hypothetical protein Tfu_0353 398660 - 396909 - | trypsin-like serine protease Tfu_0354 399813 - 398956 - | 3-mercaptopyruvate sulfurtransferase TERM 254 399676 - 399651 - G 72 -13.2 -3.14051 | overlap 399649 CGACGTCGACGAACA CCGCGCCGGG AAGGTG CCCGTCGCGG TATGCCTGGCGGCCG Tfu_0355 400278 - 399823 - | putative integral membrane protein Tfu_0356 400636 - 400271 - | putative integral membrane protein Tfu_0357 401689 - 400787 - | hypothetical protein TERM 255 401834 - 401849 + H 81 -4.8 -4.87665 | overlap 401835 CTCTTTTTGCTCTAT TTCTTT CTAG AAAGAA TTTTTCTAGATAGGC Tfu_0358 401867 - 402691 + | hypothetical protein Tfu_0359 404368 - 402740 - | peptide chain release factor 3 TERM 256 405073 - 405096 + G 70 -12.5 -3.28416 | opp_overlap 405058, overlap 405058 405090 CTGGGCGCCGACATC GTCGTCGAC CGGTAT GTCGACGAC TTCGTGTCCGTGGTC TERM 257 405381 - 405355 - g 78 -12.2 -3.72324 | CACTGCCACGAAGAA CTCACCGCCCTC GCG GAGCGCGGTGCG ATCAAACCCGCCGTC Tfu_0360 404503 - 405498 + | putative oxidoreductase Tfu_0361 405595 - 406389 + | short chain dehydrogenase/reductase family oxidoreductase TERM 258 406839 - 406871 + F 79 -10.6 -4.08216 | gap 2, overlap 406840 CGCTGCCCGAGGTGT G-CCGTGC-CGGGGGT GCC ACCCACGTGCACGGTC TTTTCCCGCACGTCA TERM 259 406840 - 406869 + F 84 -14.3 -3.63922 | gap 1, overlap 406839 GCTGCCCGAGGTGTG CCGTGC-CGGGGGT GCC ACCCACGTGCACGG TCTTTTCCCGCACGT TERM 260 407188 - 407171 - f 87 -6.2 -5.02201 | overlap 407172 AAAAGATCACAAAAA GGCCGG TTGTGG CCAGCC GTGACGTGCCGATAG TERM 261 407765 - 407749 - g 71 -11.5 -3.59979 | overlap 407753 GGGGCCGACGCCAAA GCGACCC GGC GGGCCGC GCTCGACTACGTCAC TERM 262 407962 - 407923 - g 75 -8.5 -4.1964 | gap 1, overlap 407925 CGCAACAGCGGAAAA CAGTCGGGGAGCAGGACC GGCGT GGTCCTGGCCCTCG-CCG CAGCAGGCCTGGCAG TERM 263 407961 - 407925 - g 71 -10 -3.69449 | overlap 407923 CAACAGCGGAAAACA GTCGGGGAGCAGGACC GGCGT GGTCCTGGCCCTCGCC GCAGCAGGCCTGGCA TERM 264 408741 - 408709 - g 76 -7.5 -4.29327 | opp_overlap 408732, overlap 408703 408700 408699 GAGAAGGAAGACAAA GTCATCCTGGCCGCC CAC GACGCCCGGGACGGC TCGGTCTTCGCGGAG Tfu_0362 407623 - 409056 + | hypothetical protein Tfu_0363 409083 - 409790 + | hypothetical protein TERM 265 409860 - 409834 - f 100 -23.8 -3.33969 | opp_overlap 409834 TAAGTGACCGCACAA GCCCTCCGCGTG CAC CACGCGGAGGGC TTCTTTGCTATCCGA TERM 266 409834 - 409860 + F 100 -23.8 -4.04806 | opp_overlap 409834 TAAGTGACCGCACAA GCCCTCCGCGTG CAC CACGCGGAGGGC TTCTTTGCTATCCGA Tfu_0364 409972 - 410595 + | hypothetical protein Tfu_0365 411144 - 410692 - | hypothetical protein Tfu_0366 411867 - 411172 - | methylated-DNA (protein)-cysteine S-methyltransferase Tfu_0367 413274 - 411886 - | putative transporter TERM 267 413216 - 413179 - G 76 -2.7 -4.72272 | gap 1, overlap 413182 413183 413191 TCCGGTGACGAAAAA GTATGCGTACAACGCG ATCCTGG CGCGTCGTA-GCCGAC GTGGAACGGGGTGCT TERM 268 413887 - 413851 - H 90 -16.7 -3.32022 | gap 1 CCCCGGATACACCAA GCGCCACACCC-GAGC GGAAGG GCTCCGGATGTGGCGC AGACTGGCGGCCCCA Tfu_0368 414321 - 415427 + | hypothetical protein TERM 269 415445 - 415483 + T 93 -19.7 -3.04792 | gap 2, opp_overlap 415435 GGACAGCCCGCGACA CGGTGACGGCGGCC--CCG CTA CGGCAGGCTGCCGTCACCG TGTTCCGCCTGATCA Tfu_0369 416201 - 415557 - | hypothetical protein TERM 270 416331 - 416288 - H 79 -10 -4.09685 | opp_overlap 416291, overlap 416271 416289 416291 CCGGAGTCCGGAAAA CGACCGCGGGCCCCGGCGAG TCCG CACCCCGGGACCGGCGCTCC TCTCCGGACAGCAGG TERM 271 416330 - 416289 - H 72 -13.5 -3.05597 | opp_overlap 416291, overlap 416271 416288 416291 CGGAGTCCGGAAAAC GACCGCGGGCCCCGGCGAG TCCG CACCCCGGGACCGGCGCTC CTCTCCGGACAGCAG Tfu_0370 416469 - 416753 + | hypothetical protein TERM 272 416790 - 416759 - T 77 -15.9 -2.64155 | overlap 416756 416755 GCCCGCCTAAACCCA GTTCCTGGACGGG CACACT CCCGGCCAGGAAC CGTCATCGCGAGGCT Tfu_0371 417223 - 416936 - | hypothetical protein Tfu_0372 418051 - 417407 - | hypothetical protein TERM 273 417933 - 417973 + g 100 -20.4 -3.83205 | gap 1, opp_overlap 417955 CGCTCCTGTGCGGAA CGCGCGC-GCCGCGCCGCA AGGA TGCGGCGCCGCAGCTCGCG TTTGCTCTGCCCCGT TERM 274 418838 - 418818 - g 74 -15.4 -3.02043 | AAGTGCTGCGCAAGA CCCCGCCG GGACG CGGCGGGG AGATCCAGTTGACCG Tfu_0373 418136 - 419065 + | UDP-glucose pyrophosphorylase Tfu_0374 419102 - 420334 + | molybdopterin molybdochelatase moaC 420378 - 420866 + | molybdenum cofactor biosynthesis protein C Tfu_0376 420863 - 421366 + | molybdopterin adenylyltransferase Tfu_0377 421462 - 422127 + | ribosomal-protein-alanine N-acetyltransferase TERM 275 423049 - 423102 + G 79 -15.7 -3.36492 | gap 1, overlap 423050 CCATGATGGCGCGTC GCCGGGCCCGGCAG-CGGGCGCGGCG TTC CGCGGAAGCCGCCCGCCGGGCCCGGG TTGTGGAGTTGAAAC TERM 276 423050 - 423101 + G 79 -19.2 -2.61681 | gap 1, overlap 423049 CATGATGGCGCGTCG CCGGGCCCGGCAG-CGGGCGCGGCG TTC CGCGGAAGCCGCCCGCCGGGCCCGG GTTGTGGAGTTGAAA Tfu_0378 422598 - 423173 + | hypothetical protein TERM 277 423450 - 423481 + F 100 -18.8 -4.85782 | opp_overlap 423450 423452 CTTAGCTCCACAGCA GATCCCGTTCCACC GCTG GGTGGGGCGGGATC TTTCTTTTTCCGCCG TERM 278 423481 - 423450 - f 70 -14.4 -2.62983 | opp_overlap 423450, overlap 423452 CTTAGCTCCACAGCA GATCCCGTTCCACC GCTG GGTGGGGCGGGATC TTTCTTTTTCCGCCG Tfu_0379 424045 - 424260 + | hypothetical protein TERM 279 424286 - 424317 + F 100 -28.8 -3.48395 | TCTCTAGCTGTGACT CCGGCGCCCGGTGC CTTG GCACCGGGCGCCGG TTGTGTGGGAGCCCT Tfu_0380 424610 - 425116 + | hypothetical protein Tfu_0381 425450 - 425133 - | sec-independent translocase Tfu_0382 426295 - 425495 - | putative integral membrane protein TERM 280 427420 - 427390 - g 90 -10.4 -4.74132 | overlap 427391 ACACGGCATGAAAAA CGGCCCTCCGCC AAACGAG GGCGAAGGACCA GAAGAAAAAACAGGC Tfu_0383 426517 - 427455 + | hypothetical protein TERM 281 427478 - 427431 - T 100 -5.5 -5.58179 | gap 3 GACCAGAAGAAAAAA CAGGC-GACGTCG-GCGGAGCGCT TAG AGCGCGC-GCACGTCAGCAGCCTG GGGGCCCTTGGGGCC Tfu_0384 427655 - 427452 - | cold-shock DNA-binding protein family protein TERM 282 427702 - 427679 - R 70 -11 -3.41602 | gap 1 CCTATGGGACTACAA CGGGACC-GCA CCC TGCTGGCCCCG GGTTGCTGAGCGCCC TERM 283 427858 - 427870 + r 79 -6.2 -4.59109 | CCGACCGCGATTTCC GCGG AAAGA CCGC TTTTTACAAGGTGTC TERM 284 427970 - 427923 - R 100 -23.5 -3.53444 | gap 1, opp_overlap 427951 GGATTCTGTGGTAAA GC-GAAGGCCGGGAGCGCCCCG GTCTG CAGCGCGCCCCCGGCCTTCCGC GGCACGCTCAGTTGC Tfu_0385 429894 - 427978 - | putative integral membrane protein Tfu_0386 430143 - 431012 + | hypothetical protein Tfu_0387 433819 - 431084 - | bifunctional preprotein translocase subunit SecD/SecF Tfu_0388 434278 - 433892 - | hypothetical protein Tfu_0389 434465 - 436285 + | methionyl-tRNA synthetase Tfu_0390 436962 - 436528 - | hypothetical protein Tfu_0391 437538 - 437128 - | hypothetical protein Tfu_0392 437708 - 438553 + | helix-hairpin-helix DNA-binding motif-containing protein Tfu_0393 438582 - 438773 + | hypothetical protein Tfu_0394 439244 - 438981 - | putative ATP-binding protein Tfu_0395 441494 - 440028 - | hypothetical protein Tfu_0396 442399 - 441839 - | hypothetical protein TERM 285 441894 - 441916 + g 72 -4 -4.57569 | overlap 441911 GCGTGGAGGGCGGAT GCCCAAGGGA AAA TTGCTCGGGC TTTTTCGCCAGATCC TERM 286 442746 - 442715 - R 70 -14.4 -2.57132 | overlap 442714 442717 TCGGGTTTTGAGAAT GAGCGGGCTTCAGC CACT GCAGAAACCCGCCC CTGACCCGGCTCAGG Tfu_0397 443839 - 442757 - | ATPase TERM 287 443861 - 443844 - H 75 -6.9 -4.33417 | overlap 443846 GCGACGTACAAGAAA CGCTCCG AGCA CGGAGAG AAAGAAACCTACTAC TERM 288 444004 - 443989 - g 79 -7.5 -4.42386 | overlap 443991 GCGCCAGCGAGAAAA GCGGG ACCGGG CCCGC ACCGAGCCGCCGCCG Tfu_0398 443951 - 444871 + | TatD-related deoxyribonuclease Tfu_0399 445990 - 444872 - | putative fatty acid-CoA racemase TERM 289 445775 - 445789 + g 75 -5.6 -4.62471 | overlap 445768 GGCGACCACGGCACG GACCCG GGC CAGGTC TTTTTCGGACTTCAA TERM 290 447043 - 447097 + G 70 -4.2 -4.51654 | gap 3, opp_overlap 447039, overlap 447045 AGCCCGGAAAAGCTG GTGCGCCCTGCTGGACGAGCGGATTCG GAAA CGTATCCAC--GTC-GGCCGGGCGCCC TTGTTTTTCGCTTTT Tfu_0400 446285 - 447241 + | hypothetical protein TERM 291 447659 - 447701 + G 73 -12.7 -3.53012 | gap 2, opp_overlap 447659, overlap 447665 TGCCCCCGGAGCAGA TCGAGG--CGCCGTCCCCGCG TAA CGCGTGGGAGGCGTTCCTCGA TTTGAAAGAGGCCAC TERM 292 447665 - 447693 + G 72 -13.7 -3.25088 | opp_overlap 447659, overlap 447659 CGGAGCAGATCGAGG CGCCGTCCCCGCG TAA CGCGTGGGAGGCG TTCCTCGATTTGAAA TERM 293 448099 - 448110 + G 72 -5.8 -4.37554 | opp_overlap 448099 GCTGACCACGGAAAA CTCC GATT GGAG TTTATATTTCCGTTT Tfu_0401 447298 - 448740 + | hypothetical protein Tfu_0402 448770 - 449927 + | ATPase TERM 294 449983 - 449949 - g 95 -19.2 -3.76224 | GCCGCAGCCACGAAA CGCCCCAGGGCCCCGA CCC CCGCAGCCCCGGGGCG GCTCCGGCATACCGT TERM 295 453923 - 453911 - g 82 -3.3 -4.99043 | TGGCGAGAAACAAAA GACCG GTT CGGTG AAGACAGCATGATTG Tfu_0403 449924 - 454495 + | hypothetical protein TERM 296 454824 - 454810 - f 78 -7.8 -4.36914 | opp_overlap 454788 454810 454809, overlap 454811 CGGTGTTGCACAAAA CCGGAC CTT GTCCGA CTTCTTGCTGCTGGT Tfu_0404 455040 - 455363 + | hypothetical protein ksgA 455398 - 456261 + | dimethyladenosine transferase Tfu_0406 458159 - 456285 - | tyrosine protein kinase:Serine/threonine protein kinase TERM 297 458088 - 458133 + g 71 -11.7 -3.61398 | opp_overlap 458092 458095, overlap 458089 ACGTCCGACCAGCAC GTAAGGACCGATGGTCGCCGG GTCT CCGGCGGCCAGCGGTTCCAAG TTCTTCGGGAGCCCA TERM 298 458089 - 458132 + g 70 -15.2 -2.76696 | opp_overlap 458092 458095, overlap 458088 CGTCCGACCAGCACG TAAGGACCGATGGTCGCCGG GTCT CCGGCGGCCAGCGGTTCCAA GTTCTTCGGGAGCCC TERM 299 458129 - 458092 - G 78 -16.9 -3.10715 | opp_overlap 458089 458088, overlap 458095 CCGACCAGCACGTAA GGACCGATGGTCGCCGG GTCT CCGGCGGCCAGCGGTTC CAAGTTCTTCGGGAG TERM 300 458126 - 458095 - G 78 -17.2 -2.76442 | opp_overlap 458089 458088, overlap 458092 ACCAGCACGTAAGGA CCGATGGTCGCCGG GTCT CCGGCGGCCAGCGG TTCCAAGTTCTTCGG Tfu_0407 458401 - 459324 + | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase Tfu_0408 459790 - 459329 - | redox-sensitive transcriptional activator SoxR Tfu_0409 459933 - 461723 + | ABC transporter, ATP-binding subunit Tfu_0410 462710 - 461805 - | hypothetical protein TERM 301 462816 - 462791 - R 79 -5.5 -4.6644 | gap 1, opp_overlap 462795, overlap 462792 462795 AACAGACCGGAAAAA GCTAGTCATCAC AGA GTGATGACTT-C TGTCCGTTACCGAGA TERM 302 462795 - 462813 + r 75 -11.8 -3.551 | opp_overlap 462795 462791 462792 GACCGGAAAAAGCTA GTCATCAC AGA GTGATGAC TTCTGTCCGTTACCG Tfu_0411 463383 - 462889 - | regulatory protein, MarR Tfu_0412 464081 - 463431 - | TetR family transcriptional regulator Tfu_0413 465056 - 464106 - | Delta-9 acyl-phospholipid desaturase TERM 303 465229 - 465259 + H 75 -12.6 -3.53012 | opp_overlap 465227 465223 GTCGGACAACCTATA CCTACGTAACCGTA ACC TACGGGTCCGTAGG TTTGGCAAGGGAAGC TERM 304 465366 - 465351 - H 78 -3.2 -4.96762 | overlap 465354 GAGATAGGACAAAAA TCACGT CAGC ACGGGA TGCTGCGGCCGGATC Tfu_0414 466132 - 467586 + | UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase Tfu_0415 467669 - 468637 + | ribose-phosphate pyrophosphokinase Tfu_0416 468906 - 469490 + | 50S ribosomal protein L25/general stress protein Ctc TERM 305 469517 - 469558 + F 93 -19.5 -2.87132 | overlap 469514 469519 AAAGGGGTCTGTAGC GATGCGCGGTCTTCTCGCA CGGC TGTGGGGAGGCCGCGCGTC TGTGTCCAGGGAACC TERM 306 469519 - 469556 + G 78 -16.3 -2.98823 | overlap 469514 469517 AGGGGTCTGTAGCGA TGCGCGGTCTTCTCGCA CGGC TGTGGGGAGGCCGCGCG TCTGTGTCCAGGGAA Tfu_0417 469518 - 470159 + | peptidyl-tRNA hydrolase Tfu_0418 470300 - 471097 + | 3'-phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase Tfu_0419 471151 - 472080 + | sulfate adenylyltransferase subunit 2 Tfu_0420 472136 - 473404 + | sulfate adenylyltransferase subunit 1 Tfu_0421 473883 - 473392 - | hypothetical protein TERM 307 473420 - 473468 + g 84 -19.5 -2.87564 | gap 1 CAGCGTCCTATCCTG CGGCGGGCGCCGCGGCGGGGCC GACGGA GGCTGCGCTGCGGCG-CCGCGG TGTCTGCGGCGCTCA TERM 308 473914 - 473929 + H 70 -4.7 -4.3467 | opp_overlap 473905 473908, overlap 473900 ATGACATAACTATTA GTCAC TCTGTT GTGAC TTTTAGTATCGAAAT Tfu_0422 474010 - 474477 + | BadM/Rrf2 family transcriptional regulator TERM 309 474517 - 474555 + F 84 -14 -3.59979 | opp_overlap 474529 474551, overlap 474491 474554 GGGGGTCCCGTATAC CCCTCTTTAATATGCATC CAG GATGCAAATTAACGGGGG TTTCGGCTCCCCAAC Tfu_0423 474585 - 475769 + | flavohemoprotein Tfu_0424 479528 - 475896 - | transcription-repair coupling factor TERM 310 476949 - 476970 + g 72 -6.5 -4.30576 | GCGCATCAGCTCCCG GCGGATGGC CGCG GCAATCTGC TTTTCGTCGTAGGGG TERM 311 477019 - 476994 - G 73 -9.7 -3.86346 | gap 1 GTAGGGGCCCACAAA CGTGAGGACCGG GTG CCGCTCCTC-CG GCGGAGTGAGGATCG Tfu_0425 479816 - 481297 + | adenylylsulfate kinase Tfu_0427 483475 - 482030 - | cell division membrane protein Tfu_0426 481345 - 482085 + | MazG family protein TERM 312 483144 - 483126 - Gf 75 -12.4 -3.48395 | ACTGTGGTCAGACAA CCGAGCTG TCC CAGCCCGG TCCACAGGAGTTGCC TERM 313 483818 - 483831 + FH 70 -2.3 -4.59109 | TGGGTGGTTCGCGTG GTGAC CCGG GACAC TTTTTGGGCACTGTG eno 483941 - 485224 + | phosphopyruvate hydratase Tfu_0429 485229 - 485768 + | hypothetical protein Tfu_0430 485831 - 486397 + | hypothetical protein Tfu_0431 486394 - 487389 + | Ppx/GppA phosphatase TERM 314 487677 - 487647 - f 74 -4.8 -4.56597 | gap 1, overlap 487648 487649 GCCTTGGCTTAAAAA TC-GCATGGTTTC TGCGGT GAATCCATGCAGA AGGTGACAGGCGAAG Tfu_0432 487756 - 489132 + | NADH dehydrogenase TERM 315 489218 - 489161 - f 100 -13 -5.14563 | gap 3, opp_overlap 489169 489169, overlap 489164 489166 489169 489208 TTCCCGACGAAAAAA CGA-CA-GAAG-GTAGTGGACCCGTTTCG AAT CGGAACGGGTCCACAACACTTCGTACTCG ATGGTGAAGTAAAAC TERM 316 489212 - 489164 - f 88 -16.2 -3.41701 | opp_overlap 489169 489169, overlap 489161 489166 489169 489208 CCGACGAAAAAACGA CAGAAG-GTAGTGGACCCGTTTCG AAT CGGAACGGGTCCACAACACTTC-G TACTCGATGGTGAAG TERM 317 489211 - 489166 - f 100 -19.9 -3.26783 | gap 1, opp_overlap 489169 489169, overlap 489164 489161 489169 489208 GACGAAAAAACGACA GAAG-GTAGTGGACCCGTTTCG AAT CGGAACGGGTCCACAACACTTC GTACTCGATGGTGAA TERM 318 489169 - 489208 + F 93 -18 -3.22476 | gap 1, opp_overlap 489169 489166 489164 489161, overlap 489169 GAAAAAACGACAGAA G-GTAGTGGACCCGTTTCG AAT CGGAACGGGTCCACAACAC TTCGTACTCGATGGT TERM 319 489169 - 489207 + F 86 -18.2 -2.53164 | opp_overlap 489169 489166 489164 489161, overlap 489169 GAAAAAACGACAGAA GGTAGTGGACCCGTTTCG AAT CGGAACGGGTCCACAACA CTTCGTACTCGATGG TERM 320 489207 - 489169 - f 90 -16 -3.74447 | opp_overlap 489169 489169, overlap 489166 489164 489161 GAAAAAACGACAGAA GGTAGTGGACCCGTTTCG AAT CGGAACGGGTCCACAACA CTTCGTACTCGATGG TERM 321 489393 - 489419 + F 100 -10.9 -5.45802 | gap 1 CTGAGAAACTCCCAG GTCCGGCTCCTG CATT CAGGA-CCGGGC TTTTTCTTTTGCCGC Tfu_0433 489647 - 491275 + | delta-1-pyrroline-5-carboxylate dehydrogenase 1 Tfu_0434 491294 - 492229 + | L-proline dehydrogenase TERM 322 492818 - 492791 - g 72 -13.4 -3.14344 | opp_overlap 492781 492779 CACCCGGTCCACCAA CCCGGCGCTGAT CCTC ATCTACGCCGGG CTGGAAGGCCTGTTC Tfu_0435 492333 - 493304 + | hypothetical protein TERM 323 493325 - 493358 + T 100 -16 -4.82901 | opp_overlap 493309 493326, overlap 493326 GGTCCAGAGCAGGAC AGGGTGCCTCTCCC CTGGGC GGGAGGGGCACCCG TTTTTGTACGGCCCC TERM 324 493357 - 493326 - T 87 -17.3 -2.84634 | opp_overlap 493325 493326, overlap 493309 GTCCAGAGCAGGACA GGGTGCCTCTCCC CTGGGC GGGAGGGGCACCC GTTTTTGTACGGCCC TERM 325 493326 - 493357 + T 100 -19.5 -3.49419 | opp_overlap 493309 493326, overlap 493325 GTCCAGAGCAGGACA GGGTGCCTCTCCC CTGGGC GGGAGGGGCACCC GTTTTTGTACGGCCC TERM 326 493435 - 493448 + T 71 -8.1 -4.07568 | GGCCGAGCCGTCGTT GAGCG GGCG CGCTC TTTTCCGCGGCCCAG TERM 327 493634 - 493623 - T 72 -7.2 -4.2528 | overlap 493624 CCCGAAGGGAAGAAA CCGG TCCT CCGG GGAGCGTGGAGAAAG TERM 328 493681 - 493656 - T 100 -19.1 -4.04579 | opp_overlap 493651 493674 TGGAGAAAGAGTAAA GCGGGGCATTC ACGT GAATGCCCCGC CGGGAATTGTCCGCG Tfu_0436 494939 - 493716 - | acetyl-CoA acetyltransferase Tfu_0437 496060 - 495017 - | putative secreted protein TERM 329 495989 - 495964 - G 83 -4.6 -4.82901 | gap 1, overlap 495968 TGGCCTGCAGAAAAA GCAAGGCGACG GTGCT CGCCGCCA-GC AGGGTCAACCCGCCG TERM 330 496022 - 495968 - G 93 -16.3 -3.88001 | overlap 495964 CTGCAGAAAAAGCAA GGCGACGGTGCTCGCCGCCAGCAGG GTCAA CCCGCCGCCGCCGAACATGGTCGCC GCCATGATCCGCCGA Tfu_0438 496293 - 497660 + | cystathionine beta-synthase TERM 331 497746 - 497700 - f 100 -22.4 -3.28712 | gap 1 GCTGTTCTGGCAGAA CCGTGCCCCTAGGGCCCTGGA CCCCTC CCCACGGCCCT-GGGGCACGG GAAGGGGCCTGCCCA Tfu_0439 497915 - 498589 + | putative sugar acetyltransferase Tfu_0440 498682 - 499827 + | cystathionine gamma-synthase TERM 332 499835 - 499866 + F 100 -23.1 -3.28712 | opp_overlap 499835 AGCCGTAGCCGGAAA GCCGTCCCGGGAG GCCCGA CTCCCGGGACGGC TTCTCACCCGCGCGG TERM 333 499866 - 499835 - f 100 -23.1 -3.57263 | opp_overlap 499835 AGCCGTAGCCGGAAA GCCGTCCCGGGAG GCCCGA CTCCCGGGACGGC TTCTCACCCGCGCGG Tfu_0441 500121 - 500861 + | hypothetical protein Tfu_0442 502811 - 500871 - | von Willebrand factor, type A Tfu_0443 504254 - 502827 - | magnesium chelatase subunit ChlI Tfu_0444 504366 - 505604 + | hypothetical protein Tfu_0445 506105 - 505647 - | hypothetical protein TERM 334 505791 - 505801 + g 72 -8.2 -4.06904 | opp_overlap 505784, overlap 505785 505796 GCCGAACACCGCGCT GCGC AGG GCGC TTTGTCCTTGGCTGA Tfu_0446 506884 - 506300 - | hypothetical protein TERM 335 507006 - 507052 + r 100 -37.6 -3.34233 | opp_overlap 507012, overlap 507012 GTTCCCGACGCCACC GCACAACGCGGAAGGGGTGGCT CTC GGCCACCCCTTCCGCGTTGTGC TTGTAGGGGTTATGA TERM 336 507012 - 507046 + r 100 -28 -3.56325 | opp_overlap 507012, overlap 507006 GACGCCACCGCACAA CGCGGAAGGGGTGGCT CTC GGCCACCCCTTCCGCG TTGTGCTTGTAGGGG TERM 337 507046 - 507012 - R 100 -27.3 -3.33162 | opp_overlap 507012 507006 GACGCCACCGCACAA CGCGGAAGGGGTGGC TCTCG GCCACCCCTTCCGCG TTGTGCTTGTAGGGG Tfu_0447 507565 - 507062 - | transcription elongation factor GreA Tfu_0448 508206 - 507772 - | hypothetical protein Tfu_0449 508364 - 509236 + | hypothetical protein Tfu_0450 509248 - 509466 + | hypothetical protein TERM 338 509478 - 509512 + F 100 -11.3 -5.08169 | gap 1, opp_overlap 509445, overlap 509479 509482 509483 CTGACCCGGTGTCAT GCTGTCGGCCCCGCTG CTCC CGGCGGGGCCG-CTGA TTTTTTCGGGTGTCT TERM 339 509479 - 509511 + F 87 -14.8 -3.63817 | gap 1, opp_overlap 509445, overlap 509478 509482 509483 TGACCCGGTGTCATG CTGTCGGCCCCGCTG CTCC CGGCGGGGCCG-CTG ATTTTTTCGGGTGTC TERM 340 509482 - 509509 + F 88 -16.2 -3.38726 | opp_overlap 509445, overlap 509479 509478 509483 CCCGGTGTCATGCTG TCGGCCCCGCTG CTCC CGGCGGGGCCGC TGATTTTTTCGGGTG TERM 341 509483 - 509508 + F 89 -19.7 -2.62513 | opp_overlap 509445, overlap 509482 509479 509478 CCGGTGTCATGCTGT CGGCCCCGCTG CTCC CGGCGGGGCCG CTGATTTTTTCGGGT Tfu_0451 509558 - 511555 + | hypothetical protein Tfu_0452 511624 - 512421 + | hypothetical protein TERM 342 512738 - 512711 - f 71 -7.6 -4.07885 | gap 1, opp_overlap 512724, overlap 512712 GAGGTGCCGGGAAAA GCCACCG-GCTGC ACC GCGGCGCGGTGGT TCGGCACAGTTCACC TERM 343 512806 - 512816 + F 78 -3.2 -4.88736 | opp_overlap 512803, overlap 512803 AGCGGAGAGGAACAG CGAT GCA GTCG TTTTTCTGGGTGATC Tfu_0453 512808 - 513197 + | hypothetical protein Tfu_0454 514677 - 513283 - | tyrosine protein kinase:Serine/threonine protein kinase TERM 344 514768 - 514801 + H 72 -8.2 -4.07568 | gap 3 GTGCACGCGCACGAG CACGCC-GC-C-GGGCT CCG GGCCCTGTGCTGGCGTG TTTTCCCGCCCGCGC Tfu_0455 515588 - 516298 + | sigma subunit sigma24 -like protein TERM 345 516583 - 516543 - g 72 -13.4 -3.14344 | overlap 516579 TACCGGCTGTACGAA CGGCGCTT-GGAGCGTGCGC TGA GCA-ACGCTCCAAAGCCCCG GCACGTGGGAGTGAT TERM 346 517116 - 517139 + G 75 -10.2 -4.0162 | overlap 517117 CTCCTCATCCGCACC TCCGGGGAGC AGCG GCTCTCCGGC TTTCTGCTGTGGCAG Tfu_0456 516504 - 517268 + | undecaprenyl pyrophosphate synthetase TERM 347 517454 - 517490 + F 86 -15.7 -3.18274 | opp_overlap 517452 517442 AAACCATCACGAAGG GGGCCGGTCCCGGCCCT CAT GGGGCTGGTCCCGGTCC TTGGATTCCCGTGAG Tfu_0457 517541 - 518884 + | nucleotide binding protein, PINc TERM 348 518895 - 518932 + F 84 -8.3 -4.56597 | opp_overlap 518897, overlap 518886 518898 GCTGACCGCCGCAGA CATGGGCGTTTGTCCGG TTTT CTGGGCAGGCGCCCTTA TTTTTAGACGGGGGC TERM 349 518898 - 518929 + F 100 -14.4 -4.40561 | opp_overlap 518897, overlap 518886 518895 GACCGCCGCAGACAT GGGCGTTTGTCCGG TTTT CTGGGCAGGCGCCC TTATTTTTAGACGGG Tfu_0458 519232 - 519882 + | secreted protein TERM 350 519911 - 519883 - T 72 -13.1 -3.14132 | overlap 519898 519899 GTCGGCTGGTACTAA CCACGCCCGCG CAAACGC CGCGGGCCTGG CAGGAGGCCAGGCCC TERM 351 519932 - 519898 - T 91 -17.1 -3.53444 | overlap 519883 519899 CCACGCCCGCGCAAA CGCCGCGGGCCTGGC AGGAG GCCAGGCCCGCACCA CGCGCACCACGGCGG TERM 352 519931 - 519899 - T 87 -18.4 -2.71924 | overlap 519883 519898 CACGCCCGCGCAAAC GCCGCGGGCCTGGC AGGAG GCCAGGCCCGCACC ACGCGCACCACGGCG TERM 353 519942 - 519969 + T 100 -19.9 -3.27774 | GCACCACGCGCACCA CGGCGGTGGCC TTCCGC GGCCACCGCCG TTACTGGTTCCGCTG fumC 521376 - 519985 - | fumarate hydratase Tfu_0460 522414 - 521818 - | hypothetical protein Tfu_0461 522488 - 523450 + | ABC-type multidrug transport system ATPase component Tfu_0462 523447 - 524253 + | nodulation protein J TERM 354 524275 - 524324 + T 100 -25.1 -3.14931 | gap 1, opp_overlap 524277 524278 524281 CCACCGGCGAGAACA CAGC-AAGGGTGGGGTGCAGCGGA CCG TCCGCCGCGCCCCACCCTTAGCGG TTGGTGCGGGATCAC TERM 355 524322 - 524277 - T 100 -26.3 -3.17325 | gap 1, opp_overlap 524275, overlap 524278 524281 ACCGGCGAGAACACA GC-AAGGGTGGGGTGCAGCGGA CCG TCCGCCGCGCCCCACCCTTAGC GGTTGGTGCGGGATC TERM 356 524320 - 524278 - T 100 -26.4 -2.50074 | opp_overlap 524275, overlap 524277 524281 CCGGCGAGAACACAG CAAGGGTGGGGTGCAGCGGA CCG TCCGCCGCGCCCCACCCTTA GCGGTTGGTGCGGGA TERM 357 524317 - 524281 - T 100 -25.9 -3.40191 | opp_overlap 524275, overlap 524278 524277 GCGAGAACACAGCAA GGGTGGGGTGCAGCGGA CCG TCCGCCGCGCCCCACCC TTAGCGGTTGGTGCG Tfu_0463 526009 - 524336 - | hypothetical protein TERM 358 526253 - 526217 - R 95 -15.8 -4.07568 | overlap 526218 526221 GTTCGTGGCCGAAAA GTGACCGGGCCCGGCG AGCAG CGCCGAGCCCGGTGAT CAGCGTGGCGATGCC TERM 359 526252 - 526218 - R 93 -19.3 -3.04398 | overlap 526217 526221 TTCGTGGCCGAAAAG TGACCGGGCCCGGCG AGCAG CGCCGAGCCCGGTGA TCAGCGTGGCGATGC TERM 360 526249 - 526221 - R 100 -21 -2.74605 | overlap 526218 526217 GTGGCCGAAAAGTGA CCGGGCCCGGCG AGCAG CGCCGAGCCCGG TGATCAGCGTGGCGA glpX 527294 - 526269 - | fructose 1,6-bisphosphatase II Tfu_0465 527456 - 528058 + | hypothetical protein Tfu_0466 528121 - 528693 + | putative secreted protein TERM 361 528897 - 528941 + T 76 -9.7 -4.07687 | overlap 528898 528900 CACAGCCCTACGACG TGACGTGGCGGGACACCGCCG TGC CGGGGAAGTGCCGCCCCGTCC TTTTCCGGCCCGCGT TERM 362 528898 - 528940 + T 72 -13.2 -3.04398 | overlap 528897 528900 ACAGCCCTACGACGT GACGTGGCGGGACACCGCCG TGC CGGGGAAGTGCCGCCCCGTC CTTTTCCGGCCCGCG Tfu_0467 529264 - 529019 - | exodeoxyribonuclease VII small subunit xseA 530481 - 529261 - | exodeoxyribonuclease VII large subunit Tfu_0469 531359 - 530529 - | hypothetical protein TERM 363 531513 - 531477 - R 85 -16.5 -3.04144 | overlap 531480 CTCCGAGCTGGAACA GGACCGGGGCTGGACCG TGT CTGTCCAGCCCCGGTGG TCATGCCGTCACCCC TERM 364 531510 - 531480 - R 100 -22.6 -2.74523 | overlap 531477 CGAGCTGGAACAGGA CCGGGGCTGGACCG TGT CTGTCCAGCCCCGG TGGTCATGCCGTCAC Tfu_0470 532222 - 531542 - | hypothetical protein ispH 532475 - 533476 + | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase Tfu_0472 534023 - 533481 - | hypothetical protein TERM 365 534747 - 534734 - g 72 -3.7 -4.58395 | TCGACTCCGGAAAAA CCCTG TTCT CGGGG GCCGCTGAGGCCGGC Tfu_0473 534199 - 535293 + | translation-associated GTPase TERM 366 535841 - 535868 + F 77 -14.8 -2.91264 | gap 1 AGACGGATGGCGGAA CCGGCG-GCCCCG CGG CGGGGCGCGCCCG TGTGTGGATGGAGGC TERM 367 535964 - 536017 + G 77 -15.1 -3.2056 | gap 1, opp_overlap 535957 GGACGAGACCTTCGA CGCCGCCCCGCAGCCCGGTGGGGGAC GGC GTCCCCGGGCCGG-TGCGGGGGGCCG TTGGTGGCTCTGGGT TERM 368 536239 - 536226 - g 72 -3.7 -4.59773 | GCCGATCCGGAAAAA GCGAG TGAA CGCGC TGAAGCCCTCGCCCA Tfu_0474 535887 - 536870 + | hypothetical protein TERM 369 537123 - 537135 + G 89 -7.7 -4.87626 | overlap 537107 CCTGGTGATCGTGTC GATCG TCG CGATC TTTTTCCTGTTCACC Tfu_0475 536968 - 537279 + | hypothetical protein TERM 370 538006 - 537990 - g 71 -11.5 -3.61398 | GGCCCCCCGCAAGAA CCGGGAC GAC GCCCCGG CGTTCCGGACGGGAC Tfu_0476 537292 - 540774 + | ATPase involved in chromosome partitioning Tfu_0477 540771 - 543254 + | ATPase TERM 371 543286 - 543297 + F 87 -5.8 -5.01732 | overlap 543280 TCGGCGGTTCGACCT GCGA AGGG TCGC TTTTTTGGCCGCGTT TERM 372 544970 - 544936 - g 72 -15.6 -2.84794 | overlap 544933 GGAAGGCGACAACGA GGGCGCGACCGCTACC GAG AGCGGCGGTCGCGCGC GGGCCCGGGGAGTGG TERM 373 545190 - 545154 - g 70 -12.9 -3.33696 | gap 1, opp_overlap 545188 GTCTTTTCGAAGGAA CCGGCGGTGGCGGGGC CATTCC GCCGCGCC-CGGCCGG CGGCTACACCGGGGT Tfu_0478 543992 - 545614 + | hypothetical protein TERM 374 545657 - 545630 - f 93 -17.8 -3.59979 | gap 1 CCCCGCCAGCTCAAA GGTGCAGG-CCGC ATA GCGGTCCTGCACC TTGACCCCACCCCTG TERM 375 545722 - 545734 + G 71 -10.5 -3.70446 | AAGCCACTTTCCGAC GGCGC ACA GCGCC TTGTCTTCGGTGTCC Tfu_0479 545701 - 546351 + | hypothetical protein Tfu_0480 546351 - 547523 + | cell wall-associated hydrolase (invasion-associated proteins) Tfu_0481 549227 - 548778 - | hypothetical protein TERM 376 549035 - 549057 + g 70 -3.2 -4.41494 | overlap 549037 549037 CGACTACCGGAACCG GGCCGCGGCG GCT CGCGGTGGTG TTTTGCTTGGCGGTC TERM 377 549256 - 549286 + H 100 -15.5 -4.90136 | gap 1 TGCAGCGTTGACCAT GCTCCCG-GGTCGT GGCC GCGACCGCGGGAGC TTTTTCGTGTTCCTT Tfu_0482 549423 - 549740 + | GntR family transcriptional regulator Tfu_0483 550815 - 550441 - | hypothetical protein Tfu_0484 552024 - 550918 - | streptogrisin C. Serine peptidase. MEROPS family S01A TERM 378 552246 - 552200 - R 100 -20.2 -5.00616 | gap 1, overlap 552182 552202 GGGCGGTCCAAAAAA CACGGCCCCGGCGGGA-CGAA AACCGG TCCGATCCCGCCGAGGCCGAG AACCCGCGGTCACTC TERM 379 552244 - 552202 - R 100 -21.4 -4.13561 | gap 1, overlap 552182 552200 GCGGTCCAAAAAACA CGGCCCCGGCGGGA-CGAA AACCGG TCCGATCCCGCCGAGGCCG AGAACCCGCGGTCAC Tfu_0485 554395 - 552260 - | putative peptidase Tfu_0486 554504 - 555364 + | hypothetical protein Tfu_0488 556760 - 555909 - | putative peptidase Tfu_0487 555449 - 555973 + | hypothetical protein Tfu_0489 558194 - 556860 - | hypothetical protein Tfu_0490 558499 - 558248 - | hypothetical protein Tfu_0491 558732 - 559052 + | ferredoxin TERM 380 559949 - 559969 + G 71 -10.3 -3.72576 | GTCGAAGCGTTCCAA CCTGGCCGG GTA CCGGGCGGG TTTCGTGGCCGGCGA Tfu_0492 559260 - 560372 + | N-succinyldiaminopimelate aminotransferase Tfu_0493 561250 - 560405 - | hypothetical protein TERM 381 561339 - 561318 - H 70 -11.5 -3.30441 | overlap 561300 CATGATGCGGCATAA GGGTAGGCC AGGT GGCCTGCCC GTACGGAGTGCGGTC dapD 561494 - 562330 + | 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase Tfu_0495 562424 - 563488 + | dipeptidase Tfu_0496 563593 - 564402 + | hypothetical protein Tfu_0497 564413 - 564937 + | hypothetical protein TERM 382 564947 - 564975 + G 80 -16.8 -3.17075 | gap 1, opp_overlap 564938 564935 GAATGAGCGTGGAGA GTCCGCCCCAGGA GTCG TCC-GGGGCGGAC TTCCCTTCACAAGGG TERM 383 564988 - 565046 + G 71 -10.1 -3.74693 | opp_overlap 564988 564989, overlap 564989 GACTTCCCTTCACAA GGGGC-ACGCCGCGGCGCCGACGGGCGGT TCC GCTGCCCGTGGGCGTTG-GGCGCCGCCGA TTTGATGCGCTACCA Tfu_0498 564934 - 565590 + | DNA-3-methyladenine glycosylase I Tfu_0499 565929 - 566507 + | hypothetical protein Tfu_0500 566517 - 567989 + | tyrosine protein kinase:Serine/threonine protein kinase Tfu_0501 568798 - 568007 - | enoyl-CoA hydratase Tfu_0502 569137 - 569304 + | hypothetical protein TERM 384 570778 - 570752 - g 71 -10.8 -3.59087 | opp_overlap 570768 570771, overlap 570744 570741 AACACGAGCGTCAAA GACGACTACGGG CAC CCCGGAGCCATC GAGGCTGCGCTCTTC Tfu_0503 569432 - 570937 + | leucyl aminopeptidase Tfu_0504 571138 - 571713 + | RNA polymerase sigma factor SigE Tfu_0505 571710 - 572348 + | hypothetical protein Tfu_0506 572345 - 573418 + | hypothetical protein Tfu_0507 573537 - 575006 + | trypsin-like serine protease TERM 385 575017 - 575060 + T 93 -19.7 -3.11178 | gap 1, overlap 575010 ACTAGGCCGTACACG CAT-CGAGGTCCCGGTCCTC CTGGT GAGGGCCGGGACCTCGCACG TCTTCCAGTTCCTTG Tfu_0508 576261 - 575089 - | ATP-binding protein involved in chromosome partitioning TERM 386 575925 - 575943 + g 74 -12.4 -3.59979 | ACGGGATCTCCTTCT CTGCGTGG CCA CCGCGCAG TTTGGCCTGCAGCGC Tfu_0509 576351 - 577511 + | hypothetical protein TERM 387 577566 - 577516 - f 86 -12.8 -3.90922 | AGTGGTCGTAAAGAA CG-TTTCTTCCATGGTCCTTCGGG TAGCT CCCGAAGGACCATG-AAGACTGCG CCTACGTGTCCCCGC Tfu_0510 577555 - 578211 + | hypothetical protein Tfu_0511 578230 - 579102 + | phosphoesterase PHP, N-terminal TERM 388 579663 - 579652 - g 71 -2.2 -4.58395 | gap 1, overlap 579653 GCCATCCTCGAAAAA GTCGG CGA CCG-C GAGATCTACCTGGTT Tfu_0512 579301 - 580128 + | Zn-dependent hydrolase Tfu_0513 581064 - 580192 - | putative hydrolase Tfu_0514 582667 - 581156 - | helicase, C-terminal:DEAD/DEAH box helicase, N-terminal TERM 389 582745 - 582733 - H 71 -9.1 -3.72576 | overlap 582737 GCGCGGCTCAGCAAA GCGAG GAG CTCGC GCGGCGCCCCGGTAC TERM 390 583136 - 583099 - H 75 -6.9 -4.37886 | overlap 583119 TCACTTGTGAGAAAA CACGGAAAGAATCGTGA ATAG TCCCGAGCCGTCCCGTG ACGGGAGGGACACCG Tfu_0515 583177 - 583878 + | hypothetical protein Tfu_0516 584219 - 584461 + | hypothetical protein Tfu_0517 585386 - 584559 - | hypothetical protein Tfu_0518 586154 - 585534 - | TetR family transcriptional regulator TERM 391 585899 - 585915 + g 72 -9.4 -4.08767 | overlap 585892 TGTCGTCGGTGGATT GCAGCG CAGCC CGCTGC TTTTCCACCAGTGCC Tfu_0519 586574 - 586326 - | hypothetical protein Tfu_0520 586794 - 587954 + | molybdopterin biosynthesis-like protein MoeZ TERM 392 587963 - 588000 + F 100 -20.6 -3.64703 | gap 1, overlap 587965 587989 GTACTGACCTGGGCG TCCTGCGGGGCCGCCGC ACACC GCGGCGGCCCCGC-GCA TTTGCGTCGGGAACG TERM 393 587965 - 587999 + F 100 -22.1 -2.78679 | overlap 587963 587989 ACTGACCTGGGCGTC CTGCGGGGCCGCCGC ACACC GCGGCGGCCCCGCGC ATTTGCGTCGGGAAC Tfu_0521 588077 - 588472 + | hypothetical protein Tfu_0522 588524 - 588850 + | hypothetical protein TERM 394 591802 - 591785 - g 72 -3.3 -4.56597 | gap 1, overlap 591786 591787 GCGGGGGCGGAAAAA CGCCGGGC CGC GTCCGG-G ATCGGCAGCATCGTC TERM 395 591944 - 591929 - g 72 -3.9 -4.59773 | TGGTACGCCGAAAAA CAGCG GGAGCG CGCCG AGGAGATGCTGCAGC Tfu_0523 589304 - 592438 + | putative ATP-dependent DNA helicase Tfu_0524 592553 - 595879 + | putative DNA helicase TERM 396 596116 - 596106 - f 100 -8.2 -5.4659 | overlap 596107 596108 GAAGAGAAAGAAAAA CCGG CCG CCGG TCTAAGGTGGCGGCG TERM 397 596163 - 596177 + F 82 -7.1 -4.60797 | TCGAAAAGGGGTTCG CCGGA AGTGA TCCGG TTTTCTCTGTGAGCA TERM 398 596321 - 596309 - f 71 -4.1 -4.56597 | opp_overlap 596310 596316, overlap 596310 TGGCTGGCCTAAAAA CCCTT AAC AAAGG CTTTCCTTAGTGGTT TERM 399 596350 - 596363 + F 71 -3.9 -4.58663 | TTTCGCCCACTTCTT GAAAA CTTG TTTTC TTTTTAAGAAATGGT Tfu_0525 596490 - 597242 + | hypothetical protein Tfu_0526 597347 - 598741 + | putative peptidase TERM 400 599346 - 599385 + G 72 -13.5 -3.14132 | opp_overlap 599346, overlap 599377 CCTGCTCGCCCACAA CCCGGCCTGGCCGGA AGGCCGCTAC TCCGTCCTGGCCGGG TTCGTCGAACCCGGG TERM 401 599385 - 599346 - g 74 -14.2 -3.28712 | opp_overlap 599346 599377 CCTGCTCGCCCACAA CCCGGCCTGGCCGGAA GGCCGCTA CTCCGTCCTGGCCGGG TTCGTCGAACCCGGG Tfu_0527 598738 - 599718 + | hypothetical protein TERM 402 599743 - 599731 - T 71 -10.5 -3.60296 | TAGCGGCACCGGAAA CGGCC TGC GGCCG CTCAACTAGCGCGCT Tfu_0528 600239 - 599745 - | hypothetical protein Tfu_0529 600569 - 600309 - | glutaredoxin-like protein GlrX TERM 403 600977 - 600936 - g 74 -12.1 -3.63515 | CTCGACCCTGAACAA GAGGAAGCGGTCCGAGCCG TGCG CGGCCCGGTGTGCATCCTC GCCGGGGCAGGAACC TERM 404 602684 - 602645 - g 78 -12.8 -3.69068 | gap 1, overlap 602643 GCACCGGAAGAAAGA CCGCATGGT-GCGCTGCAG GGT CTGCGGCGCCACCCTGCTG GAAGCCGTGGAGCGC Tfu_0530 600855 - 602993 + | superfamily I DNA/RNA helicase Tfu_0531 602990 - 603889 + | acyl-CoA thioesterase TERM 405 604322 - 604353 + F 100 -13 -4.87626 | gap 1 GGTAGTCCTCCCAGT GGCCGCGGATCCC CACACAC GGGG-CCGCGGCC TTTTTCGTGTTCCGA TERM 406 604400 - 604386 - f 84 -7.1 -4.77165 | TCTCCCAGAAGAAAA CCGCA GAGCT TGCGG AACTGTGCAGGTCAA Tfu_0532 604501 - 604782 + | putative DNA-binding protein TERM 407 605051 - 605027 - f 86 -14.2 -3.74693 | opp_overlap 605025 605024 TGTGAGCTGATGAAA CGGGGGTGGC CGTGC GCCGCCCCCG CCCTTTTCCCCGCGG TERM 408 605151 - 605138 - f 75 -8.1 -4.29845 | opp_overlap 605142 GAAGGGAACGGAAAA CGCCT GATG AGGCG TACCTCGTGATCGTG Tfu_0533 605184 - 605816 + | metal-dependent hydrolase Tfu_0534 607305 - 606046 - | deoxyribodipyrimidine photo-lyase type I Tfu_0535 607981 - 607424 - | hypothetical protein Tfu_0536 609381 - 607978 - | hypothetical protein Tfu_0537 609443 - 610564 + | hypothetical protein Tfu_0538 610631 - 611062 + | molybdopterin synthase subunit MoaE Tfu_0539 611119 - 612162 + | PDZ domain-containing protein Tfu_0540 612732 - 612208 - | hypothetical protein Tfu_0541 613064 - 616120 + | hypothetical protein TERM 409 616139 - 616178 + T 100 -21.4 -3.40403 | overlap 616141 GCTGCCGCGCTGCTG AAGCCGGGGTGCCGCGGG AATA CGTGCGGCACCCCGGCTG TTGTCATCAACGACA TERM 410 616141 - 616176 + T 100 -24 -3.27475 | overlap 616139 TGCCGCGCTGCTGAA GCCGGGGTGCCGCGGG AATA CGTGCGGCACCCCGGC TGTTGTCATCAACGA TERM 411 616366 - 616400 + T 100 -21.5 -3.57263 | opp_overlap 616354, overlap 616367 AGATGCGCTAGGCAT AGCCGTGGTCCCCAC CGAGT GTGGGGACCACGGCG TTTCCGGGTCCACCT TERM 412 616367 - 616399 + T 100 -25 -2.74144 | opp_overlap 616354, overlap 616366 GATGCGCTAGGCATA GCCGTGGTCCCCAC CGAGT GTGGGGACCACGGC GTTTCCGGGTCCACC TERM 413 616689 - 616729 + T 100 -19.2 -3.86015 | gap 1 CTGTCCCCGCTACTA CGCCATGAGGCCAACTGTG GAAA CACAGTTGGCCTCAC-GCG TTTCTGGGGCCCCTC Tfu_0542 617592 - 616786 - | histidinol-phosphate phosphatase Tfu_0543 618720 - 617659 - | hypothetical protein Tfu_0544 619991 - 618717 - | 3-phosphoshikimate 1-carboxyvinyltransferase Tfu_0545 620750 - 620223 - | hypothetical protein Tfu_0546 620917 - 621774 + | hypothetical protein TERM 414 621781 - 621803 + T 83 -5.6 -4.88407 | CTGTTCTGAACCTGG TCTTGGTGAG CTT TTTACCAGGA TTTTTCCTTCCGTGG TERM 415 621941 - 621996 + T 75 -12.4 -3.55444 | gap 1, opp_overlap 621949, overlap 621943 621944 CACTGGTGCACCCAG GTACGGAACCGGTATCCGGGTGCCGCC TCA GGCGGAACGCGCG-GCCGGTTCCGGTC TTTCAGCGGTAGACC TERM 416 621943 - 621994 + T 80 -13.6 -3.35597 | gap 1, opp_overlap 621949, overlap 621941 621944 CTGGTGCACCCAGGT ACGGAACCGGTATCCGGGTGCCGCC TCA GGCGGAACGCGCG-GCCGGTTCCGG TCTTTCAGCGGTAGA TERM 417 621944 - 621993 + T 81 -17.1 -2.61144 | gap 1, opp_overlap 621949, overlap 621943 621941 TGGTGCACCCAGGTA CGGAACCGGTATCCGGGTGCCGCC TCA GGCGGAACGCGCG-GCCGGTTCCG GTCTTTCAGCGGTAG Tfu_0547 622897 - 622034 - | hypothetical protein Tfu_0548 623197 - 623967 + | RNA polymerase sigma factor RpoE Tfu_0549 623964 - 624248 + | anti-sigma factor TERM 418 624276 - 624324 + F 100 -33.5 -4.33182 | opp_overlap 624281, overlap 624281 CCGGAGTGACGGGAA GAAAAGCTGGGGGGTCACACGGA ATT TCCGTGTGACCCCCCAGCTTTTG TTATTTTATGGCTGC TERM 419 624319 - 624281 - f 100 -33.4 -4.65916 | opp_overlap 624276 624281 GTGACGGGAAGAAAA GCTGGGGGGTCACACGGA ATT TCCGTGTGACCCCCCAGC TTTTGTTATTTTATG TERM 420 624281 - 624319 + F 100 -33.4 -5.12916 | opp_overlap 624281, overlap 624276 GTGACGGGAAGAAAA GCTGGGGGGTCACACGGA ATT TCCGTGTGACCCCCCAGC TTTTGTTATTTTATG TERM 421 624603 - 624634 + F 81 -11.2 -4.07568 | gap 1, opp_overlap 624612 TGCAGAGAGTTACAT TGC-GAATTACTAAT CAG ATTAGTAATTCCGCA TTTTGGAAAAGAAAC Tfu_0550 624859 - 626388 + | metal-dependent phosphohydrolase, HD region Tfu_0551 626385 - 627707 + | putative lipoprotein Tfu_0552 627868 - 628254 + | thioesterase superfamily protein Tfu_0553 629928 - 628267 - | hypothetical protein Tfu_0554 630810 - 630064 - | GntR family transcriptional regulator TERM 422 630733 - 630747 + g 82 -4.2 -5.06451 | GGGCATCGTCTCGAT CAACTG CAA CAGCTG TTTTTTGACCTGGTA Tfu_0555 630975 - 632540 + | signal transduction histidine kinase Tfu_0556 632818 - 632555 - | WhiB family cell cycle control transcriptional regulator TERM 423 633137 - 633150 + r 74 -5.2 -4.55118 | GCGTACGTCACAAGT GCCC TGAACT GGGC TTTTATGTCGCCTTA Tfu_0557 634098 - 633163 - | diacylglycerol kinase, catalytic region Tfu_0558 634150 - 634611 + | putative integral membrane protein TERM 424 634639 - 634616 - T 93 -18.2 -3.26813 | AGCAGAGATGACGAA CCCGCGTCAC AGCG GTGACGCGGG TAGGTCGTAGGCAAG Tfu_0559 635459 - 634656 - | RNA polymerase sigma factor Tfu_0560 635881 - 635456 - | putative anti-sigma factor Tfu_0561 636632 - 636147 - | putative acetyltransferase Tfu_0562 637038 - 638324 + | malate dehydrogenase (oxaloacetate decarboxylating) TERM 425 638381 - 638345 - T 75 -13.6 -2.94099 | opp_overlap 638371 638380, overlap 638364 GGGCCGGAGGAGAGA GCGTGCGGCCCTGAGG CAATC CCTCAGGGCCGTTCCC GCGCCGGCGCGGCTC TERM 426 638380 - 638412 + T 71 -12.7 -2.98729 | gap 1, opp_overlap 638345, overlap 638371 CCCTCAGGGCCGTTC CCGCGCCGGCGCGG CTCACT CCGTGCTG-CGCGG TGTCTGCTCCTTGTC Tfu_0563 639201 - 638395 - | PadR family transcriptional regulator Tfu_0564 640052 - 639198 - | hypothetical protein TERM 427 639669 - 639691 + g 73 -7.6 -4.1196 | overlap 639670 GTCCAGGGTGATGTC TCCGGAACCG TTG CGGATCTGGG TTTTCGCGGTCAGTT TERM 428 640241 - 640206 - R 100 -25.6 -3.0263 | gap 1, opp_overlap 640211, overlap 640211 ATGAGCCCGGGAACA CGTAAGGCCCCGG-CCG AGT CGGTCCGGGGCCTTACG TCGACGATGTCGCGC TERM 429 640211 - 640236 + r 89 -18.3 -3.05935 | gap 1, opp_overlap 640206 640211 CCCGGGAACACGTAA GGCCCCGG-CCG AGT CGGTCCGGGGCC TTACGTCGACGATGT TERM 430 640236 - 640211 - R 93 -18.3 -3.1855 | gap 1, opp_overlap 640211, overlap 640206 CCCGGGAACACGTAA GGCCCCGG-CCG AGT CGGTCCGGGGCC TTACGTCGACGATGT Tfu_0565 640432 - 640256 - | hypothetical protein kgd 644090 - 640446 - | alpha-ketoglutarate decarboxylase TERM 431 644262 - 644219 - H 79 -14.6 -3.01712 | gap 1 CGTCTCGTGGTAACA GGCTACTTTGCCAGAGGCGCC TAC GGCACCTCTAGCAGGGT-GCC ACGCTGGGATATACC Tfu_0567 644969 - 645349 + | regulator Tfu_0568 645422 - 646597 + | aminotransferase TERM 432 646630 - 646612 - f 72 -11 -3.54424 | GCGTACCCGCTCAAA GGAGCACC AGC AGTGCTCC CCGGGAACGGTTGAC Tfu_0569 646664 - 647296 + | hypothetical protein TERM 433 647341 - 647319 - f 76 -9.1 -4.16842 | gap 1, opp_overlap 647328 647331 CCCAGCGGGAAGAAA CCGGGCACGG CACT CCGC-CCCGG AATGGATTTCTGCAA TERM 434 647415 - 647401 - f 85 -7.8 -4.60797 | opp_overlap 647400, overlap 647403 GTGGTATACACAAAA GTGCAC CAG GCGCAC GTCTCGTCCGTGCGT Tfu_0570 647955 - 651344 + | membrane carboxypeptidase (penicillin-binding protein) TERM 435 651349 - 651386 + T 100 -24.9 -3.60627 | CGTCAGGCTGATCAG GGGTGGGGGCCGTCTCG ACAG TGGGGCGGCCCCCACCC TTTCACGTCAGGTCA Tfu_0571 652500 - 651406 - | hypothetical protein Tfu_0572 653228 - 652497 - | hypothetical protein Tfu_0573 654580 - 653303 - | putative glycosyl transferase Tfu_0574 656379 - 654946 - | DNA-directed RNA polymerase specialized sigma subunit sigma24 -like protein TERM 436 656586 - 656546 - R 95 -16.2 -4.07885 | gap 1, opp_overlap 656541 GAGTGCTGCGGAAAA GCCA-GTGGGATCCGGACG ATTT CCACCGGATCCCACGTGGC TGGAGGGTTTTATTC Tfu_0575 657594 - 656596 - | quinolinate synthetase Tfu_0576 657742 - 658473 + | hypothetical protein Tfu_0577 658547 - 659197 + | HAD family hydrolase Tfu_0578 659786 - 659295 - | putative reductase Tfu_0579 661492 - 659783 - | signal peptide peptidase A TERM 437 661556 - 661546 - R 70 -4.6 -4.36914 | TTCCCGCGCACAAAA CGGA AAT CCCG CCTGTCCGTTACCGG Tfu_0580 662774 - 661572 - | glycosyl hydrolase family chitinase Tfu_0581 662881 - 663678 + | hypothetical protein Tfu_0582 666006 - 663757 - | glycogen branching enzyme Tfu_0583 667412 - 666003 - | putative pep2 protein Tfu_0584 669239 - 667419 - | trehalose synthase TERM 438 668886 - 668900 + g 72 -4.2 -4.58283 | GGTGATGACCCGGAT GCCC CGCTGGT GGGC TTTTTCGACGAGTTC Tfu_0585 671273 - 669306 - | alpha amylase domain-containing protein Tfu_0586 671844 - 674465 + | alpha-glucan phosphorylase Tfu_0587 674961 - 675563 + | ABC transporter, permease protein TERM 439 675838 - 675793 - g 87 -17 -3.36452 | gap 3, overlap 675817 ACCGGCGAAGAGGAA GGCCG-GCT-CCTCGTCGACGGG AAA CCCG-CGACGAGCCAGCGCGGCC GGATCGGCCTGGTGG Tfu_0588 675568 - 677106 + | ATPase Tfu_0589 677103 - 677879 + | ABC-type cobalt transport system TERM 440 677889 - 677919 + F 70 -14.1 -2.63715 | opp_overlap 677889 ACCTGACACAGGCAA GGATGCCCTGG GGTCACCGA CCAGGGCATCC TCCTGTGCCGTGCAT TERM 441 677919 - 677889 - f 76 -14.1 -3.16177 | opp_overlap 677889 ACCTGACACAGGCAA GGATGCCCTGG GGTCACCGA CCAGGGCATCC TCCTGTGCCGTGCAT Tfu_0590 678140 - 678928 + | short chain enoyl-CoA hydratase Tfu_0591 678936 - 679478 + | hypothetical protein Tfu_0592 679872 - 681683 + | tyrosine protein kinase:Serine/threonine protein kinase Tfu_0593 681924 - 682703 + | electron transfer flavoprotein, beta subunit Tfu_0594 682731 - 683672 + | electron transfer flavoprotein, alpha subunit Tfu_0595 683860 - 685032 + | putative pyridoxal-phosphate-dependent aminotransferase Tfu_0596 686271 - 685117 - | hypothetical protein trmU 686385 - 687476 + | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase Tfu_0598 687577 - 688134 + | hypothetical protein TERM 442 688472 - 688462 - g 71 -2.4 -4.65263 | opp_overlap 688462 688465, overlap 688458 ACCGGGTAAAAGAAA GTGC CTT GCGC TTTCATGAAGACTTG Tfu_0599 688296 - 689051 + | hypothetical protein TERM 443 689378 - 689356 - g 78 -8.5 -4.329 | gap 1, opp_overlap 689356 689355 689359 CAATACATCAAGAAA GAGCTGAGCG ATTA CGCTCA-CTC ATTGTCCTCCTCTGG TERM 444 690035 - 690016 - g 76 -2.8 -4.7153 | AAAGAATTGGAAAAA GCAGAACA GGAC TATGCTGC AAAACTCCACAGCTC Tfu_0600 689068 - 690114 + | hypothetical protein TERM 445 691097 - 691074 - g 83 -15.4 -3.5394 | opp_overlap 691068 691070 AAATCTCGCTTGAAA GGCACTCTTC TCAA GAAGAGTGCC TCAACTTCTCGGGAA Tfu_0601 690111 - 691193 + | serine/threonine protein kinase TERM 446 691412 - 691429 + F 79 -6.3 -4.59089 | opp_overlap 691401 ACGATTGCAACATTC TTGCGAC AGAC GTTGCAA TTTCTTTATAAATTC Tfu_0602 691632 - 692660 + | hypothetical protein TERM 447 693707 - 693689 - g 72 -6.6 -4.34402 | TGCTCGACATCAAAA CCAGTGTG GGC CGCACCGG GCGGGTGACCCCCTA ligA 692677 - 694872 + | NAD-dependent DNA ligase LigA TERM 448 697129 - 697162 + G 74 -16.7 -2.70932 | gap 1 GCAGGTCGAAGCGGT CCGCGCCCTCGGCTGC TAT GCGGCCCAGGGC-CGG TACTTCACCCCGCCG Tfu_0604 695207 - 697309 + | diguanylate cyclase/phosphodiesterase gatC 697352 - 697651 + | aspartyl/glutamyl-tRNA amidotransferase subunit C TERM 449 697869 - 697852 - g 70 -8.3 -3.89346 | GCCGCAGGGGAGAAA CTCGGCC CGCT GGCCGGG GTGCCCGTGGCGCAC gatA 697648 - 699144 + | aspartyl/glutamyl-tRNA amidotransferase subunit A TERM 450 699159 - 699198 + T 100 -23 -3.48276 | gap 1, opp_overlap 699148 699149, overlap 699162 699164 AACACGTCCTGAAGC CGCTGCAGCGCCTCCGGGA GCC TCCCGGAGGCGCTGT-GTG TTGTGTGCGGGGCAC TERM 451 699162 - 699196 + T 100 -24.4 -3.31726 | opp_overlap 699148 699149, overlap 699159 699164 ACGTCCTGAAGCCGC TGCAGCGCCTCCGGGA GCC TCCCGGAGGCGCTGTG TGTTGTGTGCGGGGC TERM 452 699164 - 699194 + T 100 -27 -3.22618 | opp_overlap 699148 699149, overlap 699162 699159 GTCCTGAAGCCGCTG CAGCGCCTCCGGGA GCC TCCCGGAGGCGCTG TGTGTTGTGTGCGGG TERM 453 699221 - 699279 + T 77 -14.6 -2.87344 | gap 3, opp_overlap 699232 699236 CGGGGCACGGCACCC CGC-ACACAGGAG-GAAGGCCCCCGCCGC GGCT GCGGCAGGGGCCTTCGCGTCAG-GTAGCG TCTCTCAGCAGAGTG TERM 454 699267 - 699232 - T 100 -22.6 -2.6927 | opp_overlap 699221, overlap 699236 ACCCCGCACACAGGA GGAAGGCCCCCGCCGC GGCT GCGGCAGGGGCCTTCG CGTCAGGTAGCGTCT TERM 455 699263 - 699236 - T 100 -22 -3.26545 | opp_overlap 699221, overlap 699232 CGCACACAGGAGGAA GGCCCCCGCCGC GGCT GCGGCAGGGGCC TTCGCGTCAGGTAGC Tfu_0607 700547 - 699303 - | surface protein Tfu_0608 702267 - 701101 - | surface protein gatB 702629 - 704182 + | aspartyl/glutamyl-tRNA amidotransferase subunit B TERM 456 704255 - 704223 - f 89 -18.7 -2.78816 | opp_overlap 704221 704220 704218 704211, overlap 704225 704227 704242 CCACCGGGGATGACA GACATGTTGATCACC AAG AGTGATCAACATGTC ACATATTCTCGCTAT TERM 457 704253 - 704225 - f 81 -15.5 -2.94218 | opp_overlap 704221 704220 704218 704211, overlap 704223 704227 704242 ACCGGGGATGACAGA CATGTTGATCACC AAG AGTGATCAACATG TCACATATTCTCGCT TERM 458 704361 - 704333 - f 70 -11.6 -3.32066 | opp_overlap 704338, overlap 704323 AAGAAGCCGTGAGAA GACCTCGCACCC CTATC GGGAGCGTGGTC TGCCTGGCCCCGCGG TERM 459 704559 - 704540 - f 88 -11.4 -4.32436 | overlap 704552 704553 ACACCACCAGGAAAA GCCTCCGC AGAA GCGGAAGC GCCCTTCAGGGAGCC TERM 460 704611 - 704553 - f 74 -15.2 -2.57463 | gap 1, overlap 704540 704552 AAGCCTCCGCAGAAG CG-GAAGCGCCCTTCAGGGAGCCCTCC AGGCGA GGAGGGCGCCATGAAGGGCGGGACACG GGTATGGCTGAGCGC Tfu_0610 704595 - 707300 + | diguanylate cyclase/phosphodiesterase TERM 461 707570 - 707592 + F 100 -11.2 -5.7946 | GACGCTGCGCGCTCC CCTCAACCGC TAC GCGGTGGGGG TTTTTTTGTTGCCAG TERM 462 709183 - 709207 + G 73 -12.1 -3.49475 | overlap 709184 TGCGCATTCCGGACT TCGTCCGCCTC GCA GAGGCGTACGG TTGTGTCGGGCTGCG Tfu_0611 707643 - 709412 + | acetolactate synthase 1 catalytic subunit ilvH 709426 - 709950 + | acetolactate synthase 3 regulatory subunit Tfu_0613 710070 - 711065 + | ketol-acid reductoisomerase Tfu_0614 711305 - 712891 + | D-3-phosphoglycerate dehydrogenase TERM 463 712909 - 712932 + F 100 -14.6 -4.77165 | gap 1, overlap 712901 GGCAGCAGCGTGCCA GGGCCCGCTCC TTC GGAG-GGGCCC TTTTCTTATGCCGGG Tfu_0615 713595 - 714659 + | 3-isopropylmalate dehydrogenase TERM 464 714717 - 714766 + F 95 -12.2 -4.24204 | gap 3, overlap 714742 714744 GCTGAGCACCAGTAC CCCTTG--AT-GCGACGGGCGCGCC CAT GGCGCGCCCGTCGCCGTGTCCACGG TTTTGGGTCTGGCTC Tfu_0616 714869 - 715990 + | branched-chain amino acid aminotransferase TERM 465 716199 - 716222 + F 100 -15.4 -5.4505 | opp_overlap 716181 716184 CCCCGCCAGCGCGCA GACCTCTCGT GTCC ACGAGAGGTC TTTTTTGTTGGCGGG Tfu_0617 716285 - 717868 + | alpha-isopropylmalate/homocitrate synthase family transferase TERM 466 717912 - 717954 + T 90 -15.5 -3.78934 | gap 1 CCCGGCTGCCCTTGC CGCGCGGGCG-GCCCCTGAC CCTG GTCAGGGGCTCACCCACCCG TTCTTCTCACACCCC Tfu_0618 718709 - 717936 - | hypothetical protein Tfu_0619 719174 - 718836 - | hypothetical protein TERM 467 719372 - 719333 - R 100 -22.2 -3.02829 | GACATCGCCGGAATA GGCCGACCCGTGCCCC TTGCGGCT GGGGCACGGGTCGGCA TAAAAGCGGCGCCCG TERM 468 719412 - 719378 - R 100 -20.7 -4.36914 | overlap 719379 CGGGTCGGCATAAAA GCGGCGCCCGCCCAC GGGGA GTGGACGGGCGCCGT CTCCGGCTAGGAGGT TERM 469 719411 - 719379 - R 100 -24.2 -3.21934 | overlap 719378 GGGTCGGCATAAAAG CGGCGCCCGCCCAC GGGGA GTGGACGGGCGCCG TCTCCGGCTAGGAGG Tfu_0620 721265 - 719475 - | cellobiohydrolase TERM 470 721242 - 721256 + g 70 -8.6 -3.82218 | CATCCACGAACGTCT GTTCGT GGC ACGAAC TTTACTCATATCGGT TERM 471 721790 - 721772 - H 81 -3 -5.06414 | opp_overlap 721776, overlap 721773 721776 CTCGCGCAAGAAAAA CGGACCGA AAT TCGGTTCT CGGTAGCCTGGGGGA Tfu_0621 721840 - 722643 + | 5-carboxymethyl-2-hydroxymuconate delta-isomerase Tfu_0622 724175 - 722856 - | hypothetical protein TERM 472 724421 - 724454 + H 74 -2.4 -4.82518 | gap 2, overlap 724422 724440 AGGAGAAAACGATTC TGTTGC-GCCT-GCGG ATAA CCGAGAGGCCGCAGCG TTTTCTTGATGTTTT Tfu_0623 724678 - 726111 + | glutamyl-tRNA synthetase TERM 473 726116 - 726147 + F 84 -14.4 -3.56643 | gap 1, overlap 726116 CTGGTGAGTGAGCCC G-GGGTGGGGCGGTG GAG CGCCGCCCCACCGGC TTTGCCGGGTATCCG TERM 474 726116 - 726146 + F 75 -14.6 -2.73771 | overlap 726116 CTGGTGAGTGAGCCC GGGGTGGGGCGGTG GAG CGCCGCCCCACCGG CTTTGCCGGGTATCC TERM 475 726465 - 726483 + F 100 -6.7 -5.626 | opp_overlap 726465 ACTCGACAGAAGAGA CTCTCAC GCGGA GTGGGAG TTTTTTTCTGCGATG TERM 476 726686 - 726649 - f 100 -32.9 -2.78384 | opp_overlap 726649 GTCGGGGGTACCACA CGGGGAAGCCCCGCCTC ACGT GAGGCGGGGCTTCCCCG TTTTCTCCCTCCCTG TERM 477 726649 - 726686 + F 100 -32.9 -4.431 | opp_overlap 726649 GTCGGGGGTACCACA CGGGGAAGCCCCGCCTC ACGT GAGGCGGGGCTTCCCCG TTTTCTCCCTCCCTG Tfu_0624 726822 - 727931 + | putative oxidoreductase Tfu_0625 728686 - 727964 - | regulatory proteins, IclR Tfu_0626 728838 - 730235 + | isopropylmalate isomerase large subunit leuD 730266 - 730853 + | isopropylmalate isomerase small subunit TERM 478 731342 - 731332 - g 70 -8.2 -3.85698 | GGGGTCTTTGAGAAA GCCC AGC GGGC GGCCCGGACCGCGCG Tfu_0628 731179 - 731460 + | histone-like DNA-binding protein TERM 479 731478 - 731523 + T 93 -15.5 -3.86346 | gap 2, overlap 731481 731482 ACCACGACACTCGGC CACAGCCGTTGCCCGGGAGCC CGTCAA GGC-CCCGGGCAGCGGC-GTC TTTCTGCCCGGATCA TERM 480 731481 - 731521 + T 93 -18.3 -3.52113 | gap 1, overlap 731478 731482 ACGACACTCGGCCAC AGCCGTTGCCCGGGAGCC CGTCAA GGC-CCCGGGCAGCGGCG TCTTTCTGCCCGGAT TERM 481 731482 - 731520 + T 100 -21.8 -2.70946 | gap 1, overlap 731481 731478 CGACACTCGGCCACA GCCGTTGCCCGGGAGCC CGTCAA GGC-CCCGGGCAGCGGC GTCTTTCTGCCCGGA Tfu_0629 732138 - 731536 - | hypothetical protein Tfu_0630 732361 - 733113 + | phospholipid/glycerol acyltransferase Tfu_0631 733110 - 734120 + | glycerol-3-phosphate dehydrogenase (NAD(P)+) Tfu_0632 734295 - 735515 + | cystathionine gamma-synthase ddl 735585 - 736700 + | D-alanyl-alanine synthetase A TERM 482 736753 - 736718 - T 77 -12.6 -3.59979 | gap 1 CTGCCGCAGCGCAAA GAGCCCCGG-GACAC CGCTGTC GTGCCGCCGGGGCCC GCGCCTCACTCCGCC Tfu_0634 737579 - 736770 - | putative integral membrane protein TERM 483 736978 - 736942 - G 88 -12.1 -4.34402 | overlap 736943 736955 GCGGGCACAGCAAAA CCGAGGGACAGCAGCCG GCG CCGCCGCAGTCCCGCGA ACCGGTCCCGGAGCC TERM 484 736977 - 736943 - G 72 -13.4 -3.2032 | overlap 736942 736955 CGGGCACAGCAAAAC CGAGGGACAGCAGCCG GCG CCGCCGCAGTCCCGCG AACCGGTCCCGGAGC Tfu_0635 739537 - 737756 - | ABC transporter, ATP-binding protein Tfu_0636 741348 - 739534 - | ABC transporter, ATP-binding protein TERM 485 741140 - 741183 + g 95 -22.4 -3.05596 | opp_overlap 741132 TAGGACACCGCTGCC CTGCCCAGGGCGATCGCGGC GACG GCAGCGATCGCCCAGGACAG TTCGGTGAGCCCCTC Tfu_0637 742400 - 741372 - | cytochrome bd ubiquinol oxidase, subunit II Tfu_0638 743861 - 742410 - | putative cytochrome oxidase subunit I TERM 486 744036 - 743980 - R 100 -21.7 -4.10429 | gap 1, opp_overlap 744027, overlap 743970 743982 743986 AACGACCGGGGAAAA CAGCAATCCGGCCCTGCCCGGCAGAC CGTGCC GTCCGCCAGACAGGGCCGGATGAC-G CGAGGCGCGCGGCCG TERM 487 744035 - 743982 - R 100 -25.4 -3.64716 | opp_overlap 744027, overlap 743970 743980 743986 CGACCGGGGAAAACA GCAATCCGGCCCTGCCCGGCAGAC CGTGCC GTCCGCCAGACAGGGCCGGATGAC GCGAGGCGCGCGGCC TERM 488 744031 - 743986 - R 100 -27 -3.53779 | opp_overlap 744027, overlap 743970 743982 743980 CGGGGAAAACAGCAA TCCGGCCCTGCCCGGCAGAC CGTGCC GTCCGCCAGACAGGGCCGGA TGACGCGAGGCGCGC TERM 489 744038 - 744074 + r 72 -11.4 -3.53563 | overlap 744027 AGGGCCGGATGACGC GAGGCGCGCGGCCGCT ATTCG AGCGGCTCAGCGCCCC TTTCCACCAGCATCT Tfu_0639 744627 - 744052 - | putative secreted protein TERM 490 744941 - 744917 - g 70 -12.1 -3.27923 | overlap 744910 744920 CCGCAAGATCACCAA GATCGCCGCGA TCA TCGCGACGGTC AGCCTGGTGGCGGGA Tfu_0640 744825 - 745505 + | hypothetical protein TERM 491 745535 - 745569 + T 71 -12.1 -3.29144 | gap 1 CCCACGGTACGGCGG CGGTCAAGCGGGGCGC CAAG GCGCCCCGCTC-ACAG TTCTCCCGGGGGTAG Tfu_0641 746034 - 745564 - | hypothetical protein Tfu_0642 746298 - 746059 - | AsnC family transcriptional regulator Tfu_0643 746438 - 747427 + | thiamine monophosphate kinase TERM 492 748068 - 748056 - g 72 -5.5 -4.46212 | TTTCCTACCAGAAAA TCGCC TAC GACGA GACCCATTTCATGGG Tfu_0644 747461 - 748336 + | cellulose-binding family II protein TERM 493 748435 - 748397 - T 100 -13.3 -4.83615 | overlap 748400 CACTGCCCAGAAAAA CGATCGAGCGCCAC-GACA GTT CGTCTGTGACGCTCGA-CG ATGGTGCGCACGCGG TERM 494 748433 - 748400 - T 84 -14.7 -3.31915 | gap 1, overlap 748397 TGCCCAGAAAAACGA TCGAGCGCCAC-GACA GTT CGTCTGTGACGCTCGA CGATGGTGCGCACGC rpmB 748659 - 748471 - | 50S ribosomal protein L28 Tfu_0646 748983 - 751184 + | ATP-dependent DNA helicase RecG TERM 495 751228 - 751179 - f 70 -7.8 -4.07124 | gap 3 GAGTACCTAGAGAAA GCCTGAGGGGAGCCGC--CGCAGTG CGG CACCGCGCTGCGGCCCGTCCC-GGC GCCTGCGGGACCCGG Tfu_0647 751291 - 751872 + | hypothetical protein TERM 496 752257 - 752280 + G 71 -2.4 -4.56775 | gap 1, opp_overlap 752250 GCCCAAATGAACTAC CAGC-TCTCGG GGA TCGACACGCTG TTTTTGACCGCGAAT Tfu_0648 751939 - 752433 + | phosphopantetheine adenylyltransferase Tfu_0649 752586 - 753194 + | hypothetical protein rpmF 753347 - 753523 + | 50S ribosomal protein L32 TERM 497 753574 - 753600 + F 79 -7.2 -4.58663 | overlap 753576 CCGTTCCGTACCTCC GCCAGCGCGC TGCCGGT GCGTGCTGTC TTTTTCCGACATGGT rnc 753798 - 754520 + | ribonuclease III TERM 498 754614 - 754652 + G 76 -13.9 -3.53091 | gap 2 GGTCGAGGTCCTGCA TCCGCGTGCGGTCCGGCGC CAC GCGCCGGGT-GCG-GCGGA TTTCGCCGCGCGCGT Tfu_0652 754525 - 755415 + | formamidopyrimidine-DNA glycosylase Tfu_0653 755462 - 755737 + | acylphosphatase Tfu_0654 756020 - 756427 + | hypothetical protein TERM 499 756743 - 756712 - f 90 -16 -3.54129 | gap 1 CACAGCGTCCCGAAA GCGTGCCATGCACTC GCC AAG-GCATGGCACGC TTGACAGCGACAAAG TERM 500 757416 - 757398 - g 74 -12.4 -3.59979 | CGCCGCCAGCTCAAA CCGCTCGG CCG CCAAGCGG AACTGGCCCGCCGCG TERM 501 759125 - 759106 - g 78 -12.8 -3.73072 | AACCCGTGGACGAAA GCGAGCCG GACA CGGCCCGC CGTGACCAGTGGGCC Tfu_0655 756789 - 760340 + | condensin subunit Smc Tfu_0656 760700 - 761626 + | ABC Fe3+-hydroxamate transporter substrate-binding protein Tfu_0657 761668 - 762708 + | ABC-type transporter, permease component TERM 502 762932 - 762895 - g 90 -13.3 -3.98236 | AAAGCGGAGCAGAAA CCCGAACTCGACCAGCC GGAA GGCCGTTCGGGTGCGGG GGCCACCGCGGTGCT Tfu_0658 762787 - 763968 + | signal recognition particle-docking protein FtsY TERM 503 764000 - 763973 - f 93 -19.8 -2.71483 | AGACCTCCTGAACCA CCGCGGCGCGGG GCGA CCCGCGCCGCGC CGAACAGCCCCACGG TERM 504 764044 - 764072 + F 100 -8.9 -5.38054 | gap 1, opp_overlap 764044 764046 AGCCAGCAGACAGCA GACCG-GTGGGA GCCGCA TCCCGCACGGTC TTTTTCTTTATCCCG Tfu_0659 764337 - 765656 + | ammonium transporter TERM 505 765702 - 765739 + F 91 -20 -2.62396 | gap 1, overlap 765704 CGTAGGCGATGGGGA CGGC-AGGCCGGTGAGG AAAAC CCTCACCGGCCTCGCTG TCGTCTGCGACCATA TERM 506 765704 - 765737 + F 93 -19 -2.85351 | gap 1, overlap 765702 TAGGCGATGGGGACG GC-AGGCCGGTGAGG AAAAC CCTCACCGGCCTCGC TGTCGTCTGCGACCA Tfu_0660 766005 - 767201 + | hypothetical protein Tfu_0661 767322 - 768929 + | signal recognition particle subunit FFH/SRP54 (srp54) Tfu_0662 769177 - 769617 + | SSU ribosomal protein S16P Tfu_0663 769619 - 769861 + | hypothetical protein TERM 507 769908 - 769948 + F 100 -24.8 -3.66883 | opp_overlap 769923 CCCCATACTTGTGAT GCGAGCGCGAGGACAGGG GACTG CTCTGTCCGCGCGCTCGC TTTGCCGTCTGTTCC Tfu_0664 770029 - 770541 + | 16S rRNA processing protein RimM Tfu_0665 770716 - 771504 + | tRNA (Guanine37-N(1)-) methyltransferase rplS 771668 - 772012 + | 50S ribosomal protein L19 TERM 508 772196 - 772240 + G 84 -16.4 -3.53012 | gap 1, overlap 772197 772202 CAGGTGATCCGGTCG ACACCCCGGGCTCCCCCGTGC CTGC GCACGGGGGAGCC-GACGTGC TTTCCGAAAGGGCAG TERM 509 772197 - 772239 + G 83 -19.9 -2.71712 | gap 1, overlap 772196 772202 AGGTGATCCGGTCGA CACCCCGGGCTCCCCCGTGC CTGC GCACGGGGGAGCC-GACGTG CTTTCCGAAAGGGCA TERM 510 772202 - 772237 + G 80 -17.7 -2.90496 | gap 2, overlap 772197 772196 ATCCGGTCGACACCC CG--GGCTCCCCCGTGC CTGC GCACGGGGGAGCCGACG TGCTTTCCGAAAGGG Tfu_0667 772111 - 773127 + | signal peptidase I Tfu_0668 773273 - 773596 + | hypothetical protein Tfu_0669 773890 - 774264 + | hypothetical protein TERM 511 775307 - 775268 - g 87 -17 -3.29144 | opp_overlap 775268 775301 CCAGCCGTTGGAGAA CGGGGAGGTGACGGTGGC GCGC GCCGCCGCCACCGCCCGG TTTCCCGCCCGTTTT TERM 512 775268 - 775307 + G 93 -17 -3.55203 | opp_overlap 775268, overlap 775301 CCAGCCGTTGGAGAA CGGGGAGGTGACGGTGGC GCGC GCCGCCGCCACCGCCCGG TTTCCCGCCCGTTTT Tfu_0670 774267 - 775811 + | Mg chelatase-related protein Tfu_0671 775808 - 776992 + | SMF protein TERM 513 777553 - 777569 + G 76 -7.3 -4.33755 | overlap 777555 GTTGTCCGGCGCGGG TGGAGGA TTT TCCTCTA TTTCTTGCTCTTCGT TERM 514 777663 - 777675 + G 82 -3.3 -5.04597 | GTTTTCTGTTGTTCT CGCTA TTT TTGCG TTTTTCTCTCTGGCT Tfu_0672 777151 - 777864 + | hypothetical protein Tfu_0673 778091 - 778465 + | hypothetical protein TERM 515 778742 - 778798 + GT 81 -15.5 -3.02511 | GCTGGCTAGGGACAC TCCACGACGCGGGGGCGAGCCGGGCCA CGA TGGCGCGGCGCACCGCCGCGGCACGGG TCTTCACCGCCTACC Tfu_0675 780036 - 778948 - | hypothetical protein TERM 516 779160 - 779188 + Gg 100 -11.6 -4.82901 | overlap 779162 779162 GGACGGCCGCCCCCA GTGGGCGACCGC GCACA GCGGTCGCGCCC TTTTTCTGGGGGCCC TERM 517 779162 - 779187 + Gg 73 -12.6 -3.49419 | gap 1, overlap 779162 779160 ACGGCCGCCCCCAGT GG-GCGACCGC GCACA GCGGTCGCGCC CTTTTTCTGGGGGCC xerC 778537 - 779448 + | site-specific tyrosine recombinase XerC rpsB 780242 - 781120 + | 30S ribosomal protein S2 TERM 518 781108 - 781097 - f 91 -7.2 -4.99643 | GAGGAAAAAAAAGAA GCCG GGAG CGGC GAGGAAGCCTAGGAT tsf 781174 - 782010 + | elongation factor Ts Tfu_0678 782147 - 782905 + | uridylate kinase Tfu_0679 782961 - 783518 + | ribosome recycling factor Tfu_0680 783552 - 784478 + | phosphatidate cytidylyltransferase TERM 519 784530 - 784545 + T 73 -11.8 -3.39668 | overlap 784523 GCCCCGCGCATGGAG GCGGGC GCAA GCCCGC TTGTCACGTTTCCGG Tfu_0681 784905 - 784549 - | hypothetical protein Tfu_0682 786033 - 784960 - | hypothetical protein Tfu_0683 786227 - 787324 + | hypothetical protein Tfu_0684 788281 - 787787 - | AsnC family transcriptional regulator TERM 520 788065 - 788093 + g 75 -10.2 -4.07687 | CCAGCATCATGGGGT CGGTGACGCCCA CGACT TGGACGACACCG TTTTCGAGGAGGCGT Tfu_0685 790036 - 788396 - | CdaR family transcriptional regulator TERM 521 790856 - 790878 + G 79 -14.8 -3.30124 | opp_overlap 790846 ACGAAGTGCAGACCG GCTGGGGCCG TAC CGGCACCAGC TTCTGGGGGATCGGC Tfu_0686 790120 - 791409 + | aminotransferase Tfu_0687 791497 - 792999 + | methylmalonate-semialdehyde dehydrogenase [acylating] Tfu_0688 793510 - 793268 - | hypothetical protein TERM 522 793686 - 793698 + r 75 -3.4 -4.8048 | opp_overlap 793681 TAGTCAAAACCGGAA TTGC ATACC GCAA TTTTTGGTGTGAAAA Tfu_0689 794544 - 793738 - | putative hydrolase TERM 523 794664 - 794614 - R 91 -14.9 -3.8766 | gap 3 GCACACCACAGTAAA GGGCCGGG-ACGGGACGAGACGAT CCCCCC AGCGTCT-G-CCCGTACCCGGCCC GGCTTGGAAAGCTCC Tfu_0690 796027 - 794681 - | 4-aminobutyrate aminotransferase Tfu_0691 796201 - 797661 + | helix-turn-helix, Fis-type Tfu_0692 797863 - 798957 + | hypothetical protein TERM 524 799098 - 799087 - f 76 -5.8 -4.56597 | GTGCCCCCGCAAAAA TCCC ATCA GGGA AATAAGGGAGAAAGT TERM 525 800163 - 800135 - g 74 -15.3 -3.06501 | GACACGGTGAGCGAA GTGATCCAGACCG CCC CGGTCCGGAGCAC AGTCATCCTGCTCGA TERM 526 801166 - 801193 + G 74 -14.1 -3.28497 | overlap 801161 TCCACGCGAGTGGCT GCGCTGGGCGG AACAGG CCTCCCAGCGC TTCCCTTTCCGCTCC Tfu_0693 799802 - 802606 + | superfamily protein I DNA/RNA helicase Tfu_0694 802717 - 803595 + | putative DNA repair hydrolase Tfu_0695 804072 - 803605 - | hypothetical protein Tfu_0696 805245 - 804259 - | putative 6-phosphofructokinase: 1-phosphofructokinase Tfu_0697 805651 - 806076 + | putative ATP/GTP binding protein TERM 527 806232 - 806217 - T 100 -11.8 -5.14563 | overlap 806219 GCGGGCACGAAAAAA GCGGCG CTGC CGCCGC ACACACGGGATGGAT Tfu_0698 807075 - 806329 - | hypothetical protein Tfu_0699 808243 - 807323 - | hypothetical protein TERM 528 808905 - 808930 + H 77 -5.4 -4.6709 | gap 1 AGAAAGGCGTACGAT CCTC-GGGGCA GGCCA TTCCCCGGAGG TTTTCTATGGTTTTC Tfu_0700 809038 - 810384 + | hypothetical protein TERM 529 810595 - 810580 - g 71 -2.4 -4.54727 | TCGTCGAAATCAAAA GCCAGC CGGG ACGGGC CATCAACCGCGGCAG TERM 530 810749 - 810719 - g 78 -6 -4.56597 | opp_overlap 810722 GTGGGCCGCTAAAAA GCTCGGCATCCG CGACTAC CGGTTGCCGTAC TTCACCCCCGCCGTC Tfu_0701 810381 - 814646 + | serine/threonine protein kinase TERM 531 814673 - 814696 + T 100 -15.3 -4.26188 | CCCTGGCATGGGGGA GGCCACCGG ATGCAG CCGGTGGCC TTTTCCCTGTCTCCG Tfu_0702 814998 - 814828 - | hypothetical protein Tfu_0703 815282 - 816388 + | transposase, IS605 OrfB TERM 532 816780 - 816802 + T 100 -14.8 -4.39329 | TTTCGGGTGTGTGGG GCCACCGGCC ACG GACCGGTGGC TTTGTTCTGTGCCGT Tfu_0704 817403 - 816873 - | hypothetical protein Tfu_0705 817765 - 817403 - | hypothetical protein Tfu_0706 817932 - 818336 + | helix-hairpin-helix DNA-binding motif-containing protein Tfu_0707 818333 - 818782 + | hypothetical protein Tfu_0708 818779 - 818973 + | hypothetical protein TERM 533 820059 - 820108 + F 100 -21.5 -3.01712 | gap 1, opp_overlap 820062, overlap 820063 GAAGTAACGTCCATT GAATGCGGCGTCGAGGGCTGGAGT TAG GCGCTAGCCCTCGACGCCGC-TGC TGTTCACGGCCCCGA TERM 534 820106 - 820062 - f 100 -21.4 -3.06831 | opp_overlap 820059 820063 GTAACGTCCATTGAA TGCGGCGTCGAGGGCTGGAG TTAGG CGCTAGCCCTCGACGCCGCT GCTGTTCACGGCCCC TERM 535 820063 - 820105 + F 100 -27.8 -2.73875 | opp_overlap 820062, overlap 820059 TAACGTCCATTGAAT GCGGCGTCGAGGGCTGGAGT TAG GCGCTAGCCCTCGACGCCGC TGCTGTTCACGGCCC TERM 536 820129 - 820153 + F 71 -7.7 -4.08767 | opp_overlap 820135 ACGGCCCCGATCTGG CAGACAGGGCG CCC CGTCCGGACTG TTTTCGAGGGCTGAA TERM 537 822968 - 822954 - g 86 -2.7 -5.10461 | GTTATTGAAGAAAAA GCGCC CGACT GGAGC TCCGACGACCGCCGC TERM 538 823389 - 823346 - g 100 -11 -5.45802 | gap 1 GCCGGAAAACAAAAA CGAGATCCAGGCGCTGCGGCG CGT CGC-GCAACCGCTGAACCTCG CCACAGTCAGCGAAG Tfu_0709 820662 - 824447 + | bacteriophage resistance gene pglY TERM 539 824573 - 824519 - g 73 -12.7 -3.53012 | gap 2, overlap 824541 CGGCGCGCCCTCAAA CGCCAGCAGCGGCGCGCAGAACGCGAC CCC GCCGCGGCCCACGC-CCGC-GCGGTCG CCCTGCGTGCCGCCC TERM 540 825337 - 825302 - g 72 -13.2 -3.14931 | overlap 825322 825323 CCCAGCCTCGACGAA CTGCGCCGATTCGCAG ACAA CTGCGAAGCCGCGCTG CTCCGCCTCATGGAC TERM 541 825423 - 825402 - g 82 -11.5 -4.15044 | GGCGGGCCGAAGAAA TCCTCGCCG CCGT CGGCGCGGA CGCGGTCGCCAACAA TERM 542 826992 - 826953 - g 72 -6.2 -4.3255 | CGCCCAAGGAAGAAA TCGCGGCCGTCATCGACA CACT CGCCGAAGTCGGAGGCGA CCGGCCCCGCCTGCC Tfu_0710 824444 - 827188 + | bacteriophage resistance gene pglZ Tfu_0711 827189 - 828514 + | putative ATP/GTP binding protein TERM 543 829222 - 829209 - g 78 -5.9 -4.66163 | AGCCGCAGCGAAAAA CGGGC CACC ACCCG GCGAAGTCGAACTCG Tfu_0712 828511 - 830646 + | helicase, C-terminal:DEAD/DEAH box helicase, N-terminal TERM 544 831647 - 831660 + F 71 -3.8 -4.56597 | overlap 831644 CTGTGTCCTGCTGTC GCAG TGCTAC CTGC TTTTTACCACACCGA Tfu_0713 831832 - 832248 + | hypothetical protein TERM 545 832547 - 832515 - f 72 -8.4 -4.14739 | GCACGCAGCGCAAAA GGAACAGGCGTTCG GGAAT CAAATGCCCGCTCC ACAAAATTAGGGAAT TERM 546 833655 - 833640 - g 71 -2.4 -4.62069 | overlap 833623 GCTGCAGCCGAAAAA GCACGC CGCA ACGGGC CCCTGAAAGGCTGGC Tfu_0714 832638 - 834188 + | exonuclease Tfu_0715 834415 - 835383 + | Rossmann fold nucleotide-binding protein involved in DNA uptake Tfu_0716 836040 - 836951 + | hypothetical protein Tfu_0717 836948 - 837208 + | hypothetical protein TERM 547 837574 - 837548 - g 72 -6.4 -4.30576 | overlap 837567 CTTCGAGGACGAAAA GCCCGTCACACT CAA AGAGTGGCGTGC TGCCATTGAACGAGA Tfu_0718 837198 - 838934 + | hypothetical protein Tfu_0719 839049 - 839303 + | hypothetical protein TERM 548 841615 - 841600 - g 71 -2.4 -4.66537 | overlap 841601 841602 CCGCGGAACAGAAAA CCGCGG AAGT CGGCGA CGCACGCATCACCGG TERM 549 843848 - 843830 - g 79 -3 -4.81852 | overlap 843831 843842 CCACAACGAAGAAAA CGCGGC TGAAGAC GCCGCC CGGCAGCGGGAACTC Tfu_0720 839538 - 844010 + | superfamily protein I DNA/RNA helicase TERM 550 844031 - 844086 + F 93 -11.2 -4.60797 | gap 1, overlap 844032 844035 AGCGATTCTCGAAGC GGAATGTTGGTGGGGGTCGTGGCAG CCGAACA CTGCC-CGATCCCCACCAAAGATCG TTTTCTGTGTGAAGG TERM 551 844032 - 844085 + F 84 -14.7 -3.35996 | gap 1, overlap 844031 844035 GCGATTCTCGAAGCG GAATGTTGGTGGGGGTCGTGGCAG CCGAACA CTGCC-CGATCCCCACCAAAGATC GTTTTCTGTGTGAAG TERM 552 844035 - 844082 + F 74 -15 -2.53846 | gap 1, overlap 844032 844031 ATTCTCGAAGCGGAA TGTTGGTGGGGGTCGTGGCAG CCGAACA CTGCC-CGATCCCCACCAAAG ATCGTTTTCTGTGTG Tfu_0721 844726 - 844983 + | hypothetical protein Tfu_0722 844984 - 845577 + | hypothetical protein TERM 553 845556 - 845571 + F 72 -8.2 -4.18197 | ATCTTTGCGTAGTTT CCTCGC AGAG GCGGGG TTTTGAGTAAGAACT Tfu_0723 846032 - 846460 + | hypothetical protein Tfu_0724 850536 - 846571 - | putative type II DNA modification enzyme TERM 554 847184 - 847167 - G 71 -2.6 -4.55849 | opp_overlap 847167 GAAAAGCGAAAGAAA CCAGCG TCCGCT CGTTGG TCACGTTGGAGATCT TERM 555 848119 - 848139 + g 73 -7.5 -4.16016 | CCCCGCCAACTCGCT GATCAGCGC CTT GCGTTGAGC TTTGTTCGCCGCTCC TERM 556 848199 - 848185 - G 71 -2.8 -4.62069 | CCGGGATTCGAAAAA CTCC CTCTCTT GGAG CTTCACCCGCTCCCA Tfu_0725 853382 - 850533 - | helicase, C-terminal:DEAD/DEAH box helicase, N-terminal TERM 557 853373 - 853360 - G 75 -9.5 -4.08692 | overlap 853348 GAACCGGGTGCAAAA GCCGC GGCA GCGGC AGGACTCATGCAGCA TERM 558 854278 - 854259 - g 71 -2.1 -4.58283 | CAATCCCCGGAAAAA TCGGCTA CACCCC TAGCGGA GAAATCCCGCGGTGG Tfu_0726 853952 - 854662 + | hypothetical protein TERM 559 854751 - 854712 - T 93 -19.2 -3.15231 | overlap 854704 ATGAGAATCACCGAA TCGCCTCGGGGCCCGCTC CGGA GTGCAGGCCCCGAGGCAT GTGCCTGGAAAGAGC Tfu_0727 855592 - 854999 - | hypothetical protein TERM 560 856611 - 856593 - H 75 -4.4 -4.60797 | opp_overlap 856601, overlap 856595 856596 856604 CTCGCAGAGACAAAA GACCCGGA CAA CCCGAGGC CGGGGGGTTTGGGTG Tfu_0728 856650 - 857417 + | hypothetical protein TERM 561 857487 - 857448 - g 100 -22.9 -3.29511 | TGGATGGGGGGAGAA GCGGGAGGAGCGAGTGG GACGAA CCGCCCGCTCCTCCCGC GGTAGACGAGCCCGA TERM 562 857574 - 857541 - g 75 -16.1 -2.87564 | CCACGGGGGGAGACA GTGTGGACGGGGA TTCAGCGG CCCCCGTCCACAC CCCTCCCGCCGCTGA TERM 563 858449 - 858434 - g 72 -3.2 -4.59773 | overlap 858437 GCCGAGGTCGAAAAA CAAGTC GAGG GACTGG ACAGTTGGCAGCGGG TERM 564 858451 - 858437 - g 70 -4.2 -4.41633 | overlap 858434 GAGGTCGAAAAACAA GTCGAG GGA CTGGAC AGTTGGCAGCGGGCA Tfu_0729 857414 - 859582 + | hypothetical protein TERM 565 859624 - 859605 - g 93 -7.8 -5.22006 | overlap 859606 CGAGGAGAAGAAAAA GGCCAAGG CCAT CCTTGGCG CGGTTGGGGCGGGAA TERM 566 859623 - 859606 - g 74 -11.3 -3.72119 | overlap 859605 GAGGAGAAGAAAAAG GCCAAGG CCAT CCTTGGC GCGGTTGGGGCGGGA TERM 567 860641 - 860594 - g 76 -7.1 -4.36914 | gap 2, overlap 860596 860618 CGGTTGCCGAGAAAA GGGACGGCTCGGAC-C-CCCA GGAAACGG TGAGCATGTCCGAGCCGTCTC GGCTCAACGGCGCCT Tfu_0730 859579 - 860706 + | hypothetical protein Tfu_0731 861919 - 860663 - | helix-hairpin-helix DNA-binding motif-containing protein TERM 568 860969 - 860941 - G 78 -17.5 -2.70932 | GCTCCCGGTCAAGGA TCTCGGCCGCC TCAGCAG GGCGGCCGAGA TCGTACATGCACCAT Tfu_0732 862376 - 862639 + | hypothetical protein Tfu_0733 862796 - 863074 + | hypothetical protein Tfu_0734 863754 - 863290 - | regulatory protein, MerR TERM 569 864009 - 863970 - g 70 -15 -2.70932 | gap 1, overlap 863944 CTGTGCGCTCAAGCA TCCGGCCGGGTCCT-CGAC GTG GCCGTAGGAACCGGCCGCA ACCTTGCCCACTATT Tfu_0735 863820 - 864458 + | phosphatidylethanolamine N-methyltransferase / phosphatidyl-N-methylethanolamine N-methyltransferase TERM 570 865057 - 865036 - g 81 -13 -3.82097 | GTGAAAGCTACGAAA TCGCGGGG GACATG CCCCGCGA CCTGCTCACCGCCCA Tfu_0736 864720 - 865748 + | hypothetical protein TERM 571 866551 - 866584 + G 88 -12.4 -4.27519 | opp_overlap 866566, overlap 866552 GTGCTCCGGACCTCC ACCGGGTGGAAGGC AGCGCG GCCTTCCACACGGG TTTGTGTTCTGCGCT TERM 572 866552 - 866583 + G 80 -15.9 -3.15788 | opp_overlap 866566, overlap 866551 TGCTCCGGACCTCCA CCGGGTGGAAGGC AGCGCG GCCTTCCACACGG GTTTGTGTTCTGCGC Tfu_0737 866319 - 867476 + | hypothetical protein Tfu_0738 867548 - 868366 + | hypothetical protein TERM 573 869603 - 869617 + G 72 -9.2 -4.07885 | CGCGCACCGACTTTC CCGCGG AGT TCGCGG TTTTGACCCAGCGTG Tfu_0739 868417 - 869760 + | coproporphyrinogen III oxidase Tfu_0740 869757 - 870665 + | hypothetical protein TERM 574 870727 - 870687 - T 82 -6.8 -4.59773 | gap 1, overlap 870691 870692 TCGCACTCTGAAAAA CGAAGGGGCGGGGACCC CGTGGGGT AGGTCCCCGCCGG-TCG TGGAACCCTTCAGGT TERM 575 871020 - 871039 + T 80 -15 -3.07816 | opp_overlap 871020 AGGACGTGAAGGGAA GGCACGGC TTGG GCCGTGCC TTCGATCGGTGGAGG TERM 576 871039 - 871020 - T 83 -15 -3.18452 | opp_overlap 871020 AGGACGTGAAGGGAA GGCACGGC TTGG GCCGTGCC TTCGATCGGTGGAGG Tfu_0741 872130 - 871198 - | hypothetical protein TERM 577 872351 - 872368 + G 70 -4.1 -4.51378 | gap 1, opp_overlap 872351, overlap 872352 872352 CTGTCCTGCACTGAA TCCC-GTC CTG GACTGGGG TTTTCTACTCTCAGT Tfu_0742 872282 - 873214 + | Outer membrane protein and related peptidoglycan-associated (lipo)proteins TERM 578 873203 - 873219 + T 70 -5.1 -4.38712 | CAGTCGCCGTTGCAT CCAGG CCCCTAA CCTGG TTTTCTCCGGGTGCG TERM 579 873357 - 873337 - T 91 -9 -4.7254 | gap 1, overlap 873339 AGGCGGCAGCAAAAA CAGGCACGG GCCA CCG-GCCTG TCCCGCGGCCCGAAG TERM 580 873361 - 873339 - T 72 -9 -3.98256 | overlap 873337 GCGGCAGCAAAAACA GGCACGGGCC ACC GGCCTGTCCC GCGGCCCGAAGACCG Tfu_0743 875177 - 873393 - | hypothetical protein TERM 581 875966 - 876016 + G 83 -14.7 -3.58209 | gap 2, opp_overlap 875957, overlap 875964 GCACAAGGTCGCTCC GGCGATCGCGGTGGGCGCGCCTATC GTG GTTAAGCCCGCTC-CCGCGA-CGCC TCTTTCTGCATTGGT Tfu_0744 875406 - 876896 + | aldehyde dehydrogenase (NAD+) TERM 582 877111 - 877147 + T 73 -14.3 -2.87132 | CTGCGGCATGCCTGT GTGCCCGGCGGACCC TGCGGGT GGGCCCGCCGGGCGG TGTGTGCAGCCGGCA Tfu_0745 878268 - 877183 - | hypothetical protein TERM 583 878298 - 878264 - G 75 -9.2 -4.11751 | overlap 878254 878265 878268 ACGAACCGCGGAAAA GGCACGGCCTCCCC GGCGCGG AGGGAGGCCGTGGT CCAGGGGTCAGCCGT Tfu_0746 879911 - 878313 - | hypothetical protein Tfu_0747 880259 - 881473 + | 1-deoxy-D-xylulose 5-phosphate reductoisomerase Tfu_0748 881484 - 882836 + | PDZ/DHR/GLGF ispG 883104 - 884261 + | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase TERM 584 884279 - 884299 + F 100 -13.9 -5.52384 | overlap 884280 CGCACAGTCTTCGCG CGGGGGCCG GAC CGGCCCCCC TTTTTTTGGTGGGAC TERM 585 884280 - 884298 + F 95 -17.4 -3.90707 | overlap 884279 GCACAGTCTTCGCGC GGGGGCCG GAC CGGCCCCC CTTTTTTTGGTGGGA Tfu_0750 884439 - 886004 + | putative secreted peptidase Tfu_0751 886149 - 886991 + | hypothetical protein TERM 586 887001 - 887019 + F 73 -9.5 -3.85698 | TTCTAGCCGGCCGCC GCCCCCT CGACC GGGGGGC TTTCTGCCACCGCGA TERM 587 887862 - 887851 - g 76 -7.2 -4.25104 | overlap 887835 887832 887852 GCGCCGTGACGAAAA CGGC GGAT GCCG ACCGGCAGACGTGGT Tfu_0752 887402 - 889438 + | von Willebrand factor, type A Tfu_0753 889447 - 890811 + | putative ABC transporter periplasmic substrate-binding protein Tfu_0754 891786 - 890812 - | putative ATP-binding protein TERM 588 891514 - 891530 + g 73 -7.2 -4.13282 | overlap 891512 891528 GAGGAGCCGGGAACC CCGCCC GGGCG GGGTGG TTTTCACCATCTGCT Tfu_0755 892170 - 892664 + | putative regulatory protein TERM 589 892676 - 892713 + T 100 -24.2 -2.78384 | ATGAGTGCGGGGACA CGGCCGGGGCCGCG GCCAGCCCAA CGCGGCCCCGGCCG TGTCATGCGGGGCGG Tfu_0756 893576 - 892716 - | Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II Tfu_0757 896468 - 894069 - | TPR repeat-containing regulatory protein LuxR Tfu_0758 899141 - 896658 - | regulatory protein, LuxR TERM 590 899259 - 899228 - R 83 -9.2 -4.37886 | CGATCCGGGAGAAAA CGAGAGGTCGCGGC CTGA GACGCGGCCACCCG CACGGCGTGGGATTG hisS 900635 - 899319 - | histidyl-tRNA synthetase TERM 591 900910 - 900899 - H 70 -2.2 -4.63542 | overlap 900883 900900 GAGAATTCGGAAAAA TCCC CCGC AGGA TCGAGAGTTTTGGCA TERM 592 901048 - 901071 + H 100 -16 -4.55295 | GCCCTTGTCTTCCTG CCCCCGGAGC AGCC GTTCCGGGGG TTTCTTTGTGGCCAG TERM 593 901132 - 901102 - H 90 -7.7 -4.96848 | gap 1, opp_overlap 901102, overlap 901103 901104 TCCCCGACAGAAAAA CGGCAGCGTTTTCT CTGG AGAAAACGCTTC-G CATAAATTCTTGAGG Tfu_0760 901595 - 902185 + | putative ATP/GTP-binding protein Tfu_0761 902437 - 904695 + | preprotein translocase subunit SecA TERM 594 904721 - 904758 + F 100 -15.6 -4.58395 | overlap 904723 904724 CATTCCAGTATCCCC TCCGTGGGCCCGGTGA TCTCCC TCACCGGGCCCACCTA TTTTTCCGGAATGAC TERM 595 904723 - 904756 + F 95 -18.2 -3.90762 | overlap 904721 904724 TTCCAGTATCCCCTC CGTGGGCCCGGTGA TCTCCC TCACCGGGCCCACC TATTTTTCCGGAATG TERM 596 904724 - 904755 + F 100 -21.7 -2.93975 | overlap 904723 904721 TCCAGTATCCCCTCC GTGGGCCCGGTGA TCTCCC TCACCGGGCCCAC CTATTTTTCCGGAAT Tfu_0762 904909 - 905172 + | hypothetical protein TERM 597 905358 - 905342 - g 72 -4.3 -4.62069 | CCCGGAGCTGAAAAA CTACGCC TTC GGTGCAG ACCTCGGGCTTGCAG Tfu_0763 905226 - 905519 + | hypothetical protein TERM 598 905591 - 905552 - f 91 -16.4 -3.64703 | gap 1, opp_overlap 905579, overlap 905553 GCTGCCTTACGGAAA CGC-GGCCCGCCCCGCG AAGCCCG CACGGGGCGGGCCTGCC GCGGCACAGCGATCC TERM 599 905590 - 905553 - f 100 -19.9 -2.78679 | gap 1, opp_overlap 905579, overlap 905552 CTGCCTTACGGAAAC GC-GGCCCGCCCCGCG AAGCCCG CACGGGGCGGGCCTGC CGCGGCACAGCGATC Tfu_0764 905759 - 906724 + | methyltransferase FkbM TERM 600 906797 - 906765 - T 100 -28.5 -2.94099 | TCCGCGCAGCACAGA CTGCGGGCCGCCCCG GTC CGGGACGGCCCGCAG TGGAGAGTGGCGACC TERM 601 907082 - 907072 - T 88 -8.2 -4.60487 | overlap 907073 907074 CAGCAGGTTTAAAAA CCGG CAA CCGG TGCCATTCCCCTGTT Tfu_0765 908010 - 907096 - | putative cytochrome D ubiquinol oxidase subunit II Tfu_0766 909279 - 908041 - | highly cytochrome D ubiquinol oxidase subunit I Tfu_0767 910176 - 909511 - | LuxR response regulator receiver Tfu_0768 911403 - 910216 - | putative two-component system sensor kinase Tfu_0769 912385 - 911465 - | hypothetical protein Tfu_0770 913270 - 912503 - | hypothetical protein TERM 602 913317 - 913288 - R 72 -8.5 -4.09685 | gap 1 CGGGACGGGTTAAAA CAGG-CTCTCCGGC GGT GCGGGGGAGTCCTG CGCTTCGGCGTCGTG Tfu_0771 914112 - 913282 - | hypothetical protein Tfu_0772 914348 - 916096 + | prolyl-tRNA synthetase TERM 603 916103 - 916138 + T 100 -25.6 -3.68351 | overlap 916100 CGGGGCTAGTGCCAC CCGGTAGGGGCGTTCC GTAC GGAATGCCCCTACCGG TTTCGGTGCTAGAGC Tfu_0773 916602 - 916147 - | hypothetical protein TERM 604 916383 - 916438 + g 73 -7.5 -4.11216 | gap 3 CCTCCCCGCCCGGCG GCACCGCG--TCCCGGGCCACG-AGCGC GCT GTGCAGCGTGTCCCGCCACGCGCGGTGC TTTTCCAGATGGGAC Tfu_0774 917091 - 916603 - | hypothetical protein Tfu_0775 917364 - 917837 + | hypothetical protein nusA 917850 - 918839 + | transcription elongation factor NusA Tfu_0777 918870 - 919151 + | nucleic-acid-binding protein implicated in transcription termination TERM 605 919189 - 919234 + F 70 -11.1 -3.40403 | gap 1, opp_overlap 919191, overlap 919192 919230 GATTAGGGTTGGAAT GATCACGCCGCCCGCTCGGTTG TAC TAACCGGGTACGCGGCG-GGTC TTGTCATGCCGGAAG TERM 606 919699 - 919646 - g 79 -15.1 -3.30443 | gap 1, overlap 919617 GCAGCAGCAGACTAA GGCCTCGGCCCCGTCGGCCGGTGGTG AGA CGCCA-CGTCCGGCGGTGCCTAAGCC CGGCCCCGGCCTCAA infB 919401 - 922268 + | translation initiation factor IF-2 Tfu_0779 922389 - 922682 + | hypothetical protein TERM 607 922883 - 922870 - g 73 -9.5 -3.87994 | opp_overlap 922870 AGTGATGCGGAGAAA GCCGC GACG GCGGC TGCGTTGGAGAGCGC rbfA 922687 - 923142 + | ribosome-binding factor A truB 923146 - 924027 + | tRNA pseudouridine synthase B Tfu_0782 924164 - 925117 + | riboflavin kinase / FMN adenylyltransferase rpsO 925349 - 925618 + | 30S ribosomal protein S15 TERM 608 925626 - 925666 + F 70 -14.2 -2.64091 | gap 1, opp_overlap 925635, overlap 925635 GGCGCTAGCGGCGTG CT-CGAAAAAGGGAGTGGC CTCC GCCGCTCCCTTTTTCTTAG TAGTGTGGACTCGTT TERM 609 925635 - 925656 + F 100 -13.7 -5.15167 | opp_overlap 925635, overlap 925626 GGCGTGCTCGAAAAA GGGAGTGGC CTCC GCCGCTCCC TTTTTCTTAGTAGTG TERM 610 925656 - 925635 - f 91 -11.5 -4.56597 | opp_overlap 925635 925626 GGCGTGCTCGAAAAA GGGAGTGGC CTCC GCCGCTCCC TTTTTCTTAGTAGTG TERM 611 928302 - 928252 - g 71 -11.7 -3.62522 | overlap 928254 928255 GAACGGGGCGAAGAA GACCGACGCCAGCGGCAACGGC-GC CAA GCAGCCG-CGCCGCCGTCGCCGCAC CCGGTCGTCCAGCCG TERM 612 928300 - 928254 - g 70 -12.9 -3.38991 | overlap 928252 928255 ACGGGGCGAAGAAGA CCGACGCCAGCGGCAACGGC-GC CAA GCAGCCG-CGCCGCCGTCGCCGC ACCCGGTCGTCCAGC TERM 613 928299 - 928255 - g 73 -16.4 -2.63073 | overlap 928254 928252 CGGGGCGAAGAAGAC CGACGCCAGCGGCAACGGC-GC CAA GCAGCCG-CGCCGCCGTCGCCG CACCCGGTCGTCCAG Tfu_0784 926033 - 928336 + | polynucleotide phosphorylase/polyadenylase TERM 614 928390 - 928332 - f 78 -13.9 -3.24924 | gap 2, opp_overlap 928385 928389, overlap 928333 928384 928385 GTTCCAGTGAGAACA CCTGACCGGCTCTCCCACCCCGTCTGAGG GCT CCTCGGGAGGGGTGAGAAAACCG-TC-GG GCGGCCGTACCGTGA TERM 615 928390 - 928333 - f 70 -14.1 -2.5474 | gap 1, opp_overlap 928385 928389, overlap 928332 928384 928385 TTCCAGTGAGAACAC CTGACCGGCTCTCCCACCCCGTCTGAGG GCT CCTCGGGAGGGGTGAGAAAACCG-TCGG GCGGCCGTACCGTGA TERM 616 928424 - 928384 - f 100 -13.8 -4.37886 | opp_overlap 928385 928389, overlap 928332 928333 928385 GGAGGGGTGAGAAAA CCGTCGGGCGGCCGTACC GTGAA GGGACGGCCGCCCTCCGT TATGTGCTGGGGGGA TERM 617 928423 - 928385 - f 91 -17.3 -3.2241 | opp_overlap 928385 928389, overlap 928332 928333 928384 GAGGGGTGAGAAAAC CGTCGGGCGGCCGTACC GTGAA GGGACGGCCGCCCTCCG TTATGTGCTGGGGGG TERM 618 928385 - 928423 + F 93 -17.3 -3.54475 | opp_overlap 928332 928333 928385 928384, overlap 928389 GAGGGGTGAGAAAAC CGTCGGGCGGCCGTACC GTGAA GGGACGGCCGCCCTCCG TTATGTGCTGGGGGG TERM 619 928389 - 928419 + F 89 -19.7 -2.64051 | opp_overlap 928332 928333 928385 928384, overlap 928385 GGTGAGAAAACCGTC GGGCGGCCGTACC GTGAA GGGACGGCCGCCC TCCGTTATGTGCTGG TERM 620 928979 - 928991 + G 72 -3.3 -4.57569 | CGTGGTCGACGACGT GTTCG CCG CGCAC TTTTTCAAAGGCTCG Tfu_0785 928428 - 929816 + | mitochondrial processing peptidase TERM 621 929886 - 929829 - f 84 -17.8 -2.71364 | gap 3 TGAGCTGTTGAACCA GCCCGGCGTGCTGCGGGGAGGGCCGGC CGGACGC GCCGGTC-TCCC-GCAGC-CGCCGCGC CCTCGGGTGCCGCAC Tfu_0786 929924 - 930664 + | dihydrodipicolinate reductase Tfu_0787 932429 - 930927 - | glycerol kinase TERM 622 931954 - 931987 + g 71 -9.5 -3.72576 | opp_overlap 931949 931952 GTGCCGAACAGCACT TCGCCGCGCTGCG CCCGCTCC CGCAGCCCGGGGA TTTCGTCGAGCAGCC Tfu_0788 933421 - 932552 - | 1,4-dihydroxy-2-naphthoate octaprenyltransferase Tfu_0789 934103 - 933519 - | hypothetical protein TERM 623 933697 - 933670 - G 93 -17.1 -3.54129 | TACACGGCGTGGAAA CCGTCGTCGAC GAGGTG GTCGACGACGG CGTGCAGGAGGCGGC TERM 624 934062 - 934045 - G 70 -3.3 -4.43844 | overlap 934046 GCAGGACGGACAAAA CGCTGTG TCGA CACGGCA GGGCCCCTCACTCGT Tfu_0790 934219 - 934596 + | hypothetical protein TERM 625 934611 - 934669 + F 74 -11.3 -3.5764 | gap 5, opp_overlap 934633 ACCGACCGTCCTCGT GC-GGATCGGAGCGCGCCACAGACCTTCCC AAAC GGGGAGG--T-TGGCGCGCTCTG-TCCAGC TTTCGCGGTACCGTT dapA 934691 - 935668 + | dihydrodipicolinate synthase Tfu_0792 935665 - 937350 + | metallo-beta-lactamase family hydrolase Tfu_0793 937425 - 939926 + | ATPase Tfu_0794 940041 - 940781 + | helix-hairpin-helix DNA-binding motif-containing protein Tfu_0795 940868 - 942319 + | hypothetical protein Tfu_0796 942316 - 942930 + | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase TERM 626 943164 - 943204 + G 91 -11.7 -4.57341 | GCACGGGGCCGTCCA TCCGGAAGTCGCCGTGG CGATGGC CCGCGGCGCCCGCCGGA TTTTTGCGGCCACTT Tfu_0797 942934 - 943440 + | competence/damage-inducible protein cinA Tfu_0798 943599 - 943958 + | helix-hairpin-helix DNA-binding motif-containing protein TERM 627 944014 - 944033 + F 75 -7.1 -4.34771 | overlap 944023 ACGGTCGACCCGTTC GCGCTCC CTCCCC GGAGTGC TTTTCCTGGGTTTTC Tfu_0799 944112 - 944579 + | hypothetical protein Tfu_0800 945096 - 944644 - | BadM/Rrf2 family transcriptional regulator Tfu_0801 945798 - 945283 - | acetyltransferase Tfu_0802 946102 - 946350 + | hypothetical protein Tfu_0803 946506 - 950039 + | DNA recombination protein RecA precursor recX 950032 - 950589 + | recombination regulator RecX Tfu_0805 950784 - 952289 + | metal-dependent phosphohydrolase, HD region Tfu_0806 954317 - 952332 - | putative acyl-peptide hydrolase TERM 628 954430 - 954388 - R 100 -24.2 -3.12351 | GCTGGTGAGACGGAA TGGGGGAGCCTCACCGCCTG TGC CGGAAGGTGAGGCTCCCCCA GGGGAGTCATGCCAG Tfu_0807 955434 - 954451 - | amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine Tfu_0808 956105 - 955431 - | amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine TERM 629 956156 - 956124 - R 86 -18.3 -2.63596 | TCCCAGTCGATAGGA GTGGCCGACGGGGCG GGG CGCCCCGCCGGCCTT GGACGGGTAGCGGGG Tfu_0809 957029 - 956172 - | extracellular solute-binding protein TERM 630 956480 - 956517 + g 76 -3.1 -4.70169 | gap 1 ATTCGGAGTAGTTGC CGGCTTCCCGGAGCTCCG CGC CGATGC-CCAGGCCGCCG TTTTCTTCGCTGTCG Tfu_0810 957823 - 957080 - | ABC-type polar amino acid transport system ATPase component Tfu_0811 958055 - 959539 + | tRNA-i(6)A37 thiotransferase enzyme MiaB TERM 631 959558 - 959591 + T 85 -16.7 -2.92192 | gap 1, overlap 959554 959557 GGATTCGTTGTGTTG CGGGGACGGGCCCGGT GAC GCCGGAC-CGTCCCCG TCTGCTTCGGTCACA Tfu_0812 960231 - 959602 - | peptide ABC transporter ATPase Tfu_0813 962337 - 960247 - | hypothetical protein Tfu_0814 962711 - 962421 - | bacteriocin, lactococcin 972 TERM 632 963652 - 963640 - R 70 -4.7 -4.37886 | CGAGCGTGGAGAAAA CGCGG GTG CCGGG AAGCTCGTCTCAGGA miaA 964621 - 963662 - | tRNA delta(2)-isopentenylpyrophosphate transferase Tfu_0816 964712 - 965536 + | diaminopimelate epimerase Tfu_0817 965533 - 966543 + | ABC peptide/nickel transport system permease protein Tfu_0818 966707 - 968413 + | peptide/nickel transport system substrate-binding protein Tfu_0819 970072 - 968474 - | malate synthase TERM 633 970093 - 970103 + H 75 -3.2 -4.84311 | opp_overlap 970083, overlap 970084 CAAACCTTCCGCATG GCGA AAC TTGC TTTTGTTATGTGGAA TERM 634 970313 - 970296 - H 74 -4.7 -4.57569 | GGAGCGCCTCAAAAA CCACCTG ACTT CTGGCGG TACCCGTGGGACGAT Tfu_0820 970370 - 971851 + | small GTP-binding protein domain-containing protein TERM 635 971901 - 971874 - f 100 -21.4 -5.13741 | opp_overlap 971874 CTAACCGAACAAAAA CGGCGGAACCTC TTGT GAGGTTCCGCCG TTTACTGTTCAGCCG TERM 636 971874 - 971901 + F 100 -21.4 -3.92324 | opp_overlap 971874 CTAACCGAACAAAAA CGGCGGAACCTC TTGT GAGGTTCCGCCG TTTACTGTTCAGCCG Tfu_0821 972125 - 973330 + | imidazolonepropionase Tfu_0822 974035 - 973376 - | hypothetical protein Tfu_0823 975234 - 974194 - | DNA polymerase III, delta subunit Tfu_0824 976076 - 975231 - | hypothetical protein TERM 637 975365 - 975334 - G 81 -12.2 -3.84266 | gap 1 ATATCCCACAGGAAA CCG-TCCCGCACCGC GGT GCGGAGCCGGAGCGG AAGCCGCGGATACAC Tfu_0825 978485 - 976131 - | ComEC/Rec2-related protein TERM 638 976472 - 976458 - G 70 -12.8 -3.38272 | GAGCAGCACCGACAA CCCGCC TTC GGCGGG CGGGGCAGCGGACCG TERM 639 977243 - 977194 - G 74 -11.9 -3.78775 | opp_overlap 977202 GCGGCGACCACGAAA CCGCCGACGGTGGCGACCGGCAC GAAC GGCCCAGCCGCCACGTTCGTCGG CACGGACACCCAACT Tfu_0826 979549 - 978482 - | helix-hairpin-helix DNA-binding, class 1 TERM 640 979700 - 979674 - R 91 -16.6 -3.69354 | CCCGACAACGCGAAA GGCCAGACACCG TCA CGATGCCTGGCC GTGGGCGCGTGTCAG Tfu_0827 980015 - 979737 - | SSU ribosomal protein S20P Tfu_0828 981280 - 980213 - | hypothetical protein Tfu_0829 981364 - 983208 + | GTP-binding protein LepA TERM 641 983239 - 983210 - T 100 -20.8 -4.14945 | GCAAGAAGAAGTAAA GCGCTTCCCGGC CCGCAC GCCGGGAAGCGC GTGGGAAGGGGCCGG Tfu_0830 984170 - 983295 - | multiple sugar transport system permease protein Tfu_0831 985777 - 984167 - | multiple sugar transport system permease protein Tfu_0832 987034 - 985784 - | multiple sugar transport system substrate-binding protein TERM 642 987227 - 987191 - R 73 -13.7 -2.87132 | opp_overlap 987193, overlap 987193 TCTCCGGTTGACATA GAGGGGTCCGAACGCCC CCG AAAAGTCCGGACCCCTC TGTCGGTGTCAGCGC Tfu_0833 988898 - 987264 - | alpha-glucosidase TERM 643 989322 - 989363 + G 71 -11.7 -3.55444 | gap 1, overlap 989323 TGGAGGACGAGTACG TGGAGATGCTGCTGGA-ACG TAA CGTCTCCGGCATCATCTTCG TTTCCGGCCTGCACG Tfu_0834 989003 - 990046 + | LacI family transcription regulator Tfu_0835 990189 - 991421 + | coproporphyrinogen III oxidase TERM 644 991469 - 991438 - T 75 -10.8 -3.88291 | gap 1, overlap 991439 CAGGAGCCCGACAAA GTTCAGGGGGATCCC GGT GGGATCCCCC-GTGC CGCAGGCCGAGACTA Tfu_0836 992000 - 991482 - | hypothetical protein Tfu_0837 992808 - 992182 - | hypothetical protein hrcA 993348 - 994379 + | heat-inducible transcription repressor TERM 645 994455 - 994445 - g 83 -4.6 -4.82667 | overlap 994446 GGACGAGATCAAAAA GGCA TAC CGCC GGCTCGCACGTGAAC Tfu_0839 994380 - 995519 + | heat shock protein DnaJ Tfu_0840 995516 - 996262 + | hypothetical protein Tfu_0841 996971 - 996303 - | hypothetical protein Tfu_0842 997498 - 996968 - | RNA polymerase ECF-subfamily sigma factor Tfu_0843 997810 - 998166 + | protein kinase C inhibitor Tfu_0844 998251 - 999396 + | phosphate starvation-inducible protein PhoH ATPase Tfu_0845 999460 - 999927 + | putative metalloprotease Tfu_0846 999924 - 1001243 + | CBS domain-containing protein Tfu_0847 1001263 - 1001634 + | hypothetical protein TERM 646 1001843 - 1001811 - g 82 -19.9 -2.62263 | opp_overlap 1001798 ACCGGCCGCAGACCA CGCGGCGCACGATCC GCG GCATCGTGCACCGCG AGAACGCGCAGTTGA era 1001645 - 1002592 + | GTP-binding protein Era Tfu_0849 1003442 - 1002612 - | regulatory proteins, IclR Tfu_0850 1004179 - 1005858 + | 2-isopropylmalate synthase TERM 647 1005961 - 1005919 - T 100 -20.7 -3.29511 | gap 2, opp_overlap 1005927, overlap 1005921 CTGACTGTTCGAGAA CA-GGC-ACAGGCCCCGCCCG ATA CGGGCGGGGCCTGTTGGCGTG CTCGACTATTCGCGG TERM 648 1005958 - 1005921 - T 100 -23.5 -3.21593 | gap 1, opp_overlap 1005927, overlap 1005919 GACTGTTCGAGAACA GGC-ACAGGCCCCGCCCG ATA CGGGCGGGGCCTGTTGGC GTGCTCGACTATTCG TERM 649 1005927 - 1005951 + T 100 -24.3 -3.07043 | opp_overlap 1005921 1005919 TCGAGAACAGGCACA GGCCCCGCCCG ATA CGGGCGGGGCC TGTTGGCGTGCTCGA Tfu_0851 1006830 - 1005967 - | hypothetical protein recO 1007016 - 1007747 + | DNA repair protein RecO Tfu_0853 1007744 - 1008592 + | undecaprenyl pyrophosphate synthetase TERM 650 1008760 - 1008809 + G 83 -15 -3.66178 | gap 1 TACGCCAATCTCGCG GTGCGCGGCAGGCTGCTGCGCCA GGTCA TGGAGGAGCAGC-TGCCCCGCGC TTTGGAGTTGGCCCC Tfu_0854 1008592 - 1009374 + | hypothetical protein TERM 651 1009432 - 1009416 - f 76 -9.4 -4.08216 | GCAGCGGGGGCAAAA CCCCTG ATCGG CAGGGG GAGCGCGGGTGTGAG Tfu_0855 1009522 - 1010325 + | hypothetical protein Tfu_0856 1010727 - 1010338 - | zinc uptake regulator TERM 652 1010418 - 1010444 + g 85 -15.9 -3.59979 | gap 1, opp_overlap 1010413 GGTCGACGAAGCCGT GCTGGGCGG-CG AGTT CGTCCGCCCAGC TTTCCACTGCCGGGC Tfu_0857 1011617 - 1010724 - | ABC zinc/manganese transport system permease protein Tfu_0858 1012404 - 1011610 - | ABC-type Mn/Zn transport systems ATPase component Tfu_0859 1012795 - 1012436 - | hypothetical protein Tfu_0860 1012961 - 1013329 + | hypothetical protein Tfu_0861 1013492 - 1014880 + | glycyl-tRNA synthetase TERM 653 1014890 - 1014918 + T 72 -6.5 -4.25104 | overlap 1014882 1014900 1014903 TGCTGACCCGTACGG CGGTCCGTTGACG TTG CGGCCCTGGACCG TTTTGGTCCGGGGCC TERM 654 1014900 - 1014940 + T 93 -19.7 -3.14564 | overlap 1014890 1014903 TACGGCGGTCCGTTG ACGTTGCGGCCCTGGACCG TTT TGGTCCGGGGCCGCAGTGG TTACTGCGCCGGTGC TERM 655 1014903 - 1014937 + T 100 -22.2 -2.77899 | overlap 1014890 1014900 GGCGGTCCGTTGACG TTGCGGCCCTGGACCG TTT TGGTCCGGGGCCGCAG TGGTTACTGCGCCGG Tfu_0862 1016041 - 1014941 - | HylII Tfu_0863 1016076 - 1018751 + | pyruvate phosphate dikinase TERM 656 1018779 - 1018813 + F 80 -14.4 -3.32022 | gap 1, opp_overlap 1018771 CCGATAAGCACGGTG GTCCCCGCCTTGCGA CCCTGC TC-CGAGGCGGGGAC TTCATATATGACGAA Tfu_0864 1019062 - 1020009 + | hypothetical protein Tfu_0865 1020106 - 1021338 + | deoxyguanosinetriphosphate triphosphohydrolase-like protein dnaG 1021393 - 1023363 + | DNA primase Tfu_0867 1023371 - 1024537 + | sigma-70 factor Tfu_0868 1024622 - 1025977 + | glycosyl hydrolase family chitinase Tfu_0869 1026454 - 1025990 - | hypthetical protein Tfu_0870 1026974 - 1026477 - | hypothetical protein Tfu_0871 1027324 - 1027019 - | hypothetical protein TERM 657 1027651 - 1027674 + H 95 -14.6 -3.98214 | AGTTCCGCACGTCGA GGCTCTTGCC CTGA GGCGAGAGCC TTTATCGTGACTGCT TERM 658 1028168 - 1028191 + H 70 -7.4 -4.067 | opp_overlap 1028173, overlap 1028173 GGGCGATCCCCTCAA CGCAAGTGGC AGGA GTCACTTTCG TTCTTCTTGATTTGA TERM 659 1028192 - 1028210 + H 78 -3.2 -4.89233 | CAGGAGTCACTTTCG TTCTTC TTGATTT GAAGAA TTTTTCATGTTCATA Tfu_0872 1028284 - 1028628 + | ArsR family transcriptional regulator Tfu_0873 1028625 - 1030418 + | SulP family sulfate permease Tfu_0874 1031278 - 1030496 - | 3-oxoadipate enol-lactonase Tfu_0875 1033194 - 1032019 - | thiolase TERM 660 1034036 - 1034052 + G 70 -9.4 -3.85698 | CCCGCACCGCCCCGG CCAGCC CATGC GGCTGG TTTCTGCCCGGAACG Tfu_0876 1033395 - 1034114 + | 5-amino-6-(5-phosphoribosylamino)uracil reductase Tfu_0877 1034111 - 1034572 + | 5-amino-6-(5-phosphoribosylamino)uracil reductase Tfu_0878 1037126 - 1034610 - | helicase, C-terminal:DEAD/DEAH box helicase, N-terminal TERM 661 1036440 - 1036457 + g 71 -11.3 -3.64283 | GATGTAGACGGGCGC CTGCTGG GATT CCAGCAG TTCTTCCAGCGTTTC Tfu_0879 1038188 - 1037811 - | hypothetical protein Tfu_0880 1038850 - 1038362 - | regulatory protein, MarR TERM 662 1039283 - 1039297 + G 72 -8.5 -4.07687 | GTTCCTGTTCGCGAC CCCGC TGTTC GCGGG TTTTGCGAACGCGCT Tfu_0881 1039017 - 1040699 + | cytochrome-c oxidase TERM 663 1040781 - 1040810 + T 100 -20.9 -3.18264 | opp_overlap 1040784, overlap 1040784 ATCGTCGGCGGCACC GAAGGCGTTCCCA GCTC TGGGAACGCCTTC TTCGTAGGTGCCGGC TERM 664 1040784 - 1040807 + T 91 -16.8 -3.73647 | opp_overlap 1040784, overlap 1040781 GTCGGCGGCACCGAA GGCGTTCCCA GCTC TGGGAACGCC TTCTTCGTAGGTGCC TERM 665 1040807 - 1040784 - T 85 -16.8 -3.05384 | opp_overlap 1040784 1040781 GTCGGCGGCACCGAA GGCGTTCCCA GCTC TGGGAACGCC TTCTTCGTAGGTGCC TERM 666 1040916 - 1040879 - T 100 -19.1 -3.87815 | opp_overlap 1040875, overlap 1040880 GGGGAGGCGCAGAAA CGGCCGGTGGCGGCCAC TGCA GTGGCCGCCACCGGGAA GGAGATCTTGCTGAC TERM 667 1040915 - 1040880 - T 100 -20.4 -2.92475 | opp_overlap 1040875, overlap 1040879 GGGAGGCGCAGAAAC GGCCGGTGGCGGCCAC TGCA GTGGCCGCCACCGGGA AGGAGATCTTGCTGA Tfu_0882 1041911 - 1040952 - | triacylglycerol lipase TERM 668 1042384 - 1042347 - R 100 -15.5 -4.39002 | overlap 1042349 AAAGGGGGGACAAAA CGGCCGGTGGCGGCCAC CGCA GTGACCGCCACCGAAAG AATGGGGAGGAAAGA TERM 669 1042382 - 1042349 - R 81 -16.7 -2.53125 | overlap 1042347 AGGGGGGACAAAACG GCCGGTGGCGGCCAC CGCA GTGACCGCCACCGAA AGAATGGGGAGGAAA Tfu_0883 1043322 - 1042417 - | triacylglycerol lipase TERM 670 1043793 - 1043772 - R 91 -6.5 -5.03994 | overlap 1043773 TGGGACAGAGAAAAA GCCCGGAAT CCTG ACTCCGGGG CTGAAATAGGTAGCG TERM 671 1043792 - 1043773 - R 71 -10 -3.61674 | overlap 1043772 GGGACAGAGAAAAAG CCCGGAAT CCTG ACTCCGGG GCTGAAATAGGTAGC Tfu_0884 1045346 - 1043826 - | putative integral membrane protein TERM 672 1045034 - 1044989 - G 87 -21.9 -2.87132 | gap 1, overlap 1045008 CGCTGCGCGGATACA GCCGCAGCCACGGCCA-GAACG CCG CGCCCATGGCCACGGCCGCGGC CGCAGCCAGCCACAC TERM 673 1045296 - 1045256 - G 70 -12.3 -3.36505 | overlap 1045257 1045260 AGACCGCACCCACAA CCCAGCCGGGCGCGGGGAG CAC CCCGCCGCGTCCGGCCCGC GCCGGGGCCGGTGAT TERM 674 1045295 - 1045257 - G 73 -15.8 -2.61582 | overlap 1045256 1045260 GACCGCACCCACAAC CCAGCCGGGCGCGGGGAG CAC CCCGCCGCGTCCGGCCCG CGCCGGGGCCGGTGA TERM 675 1045292 - 1045260 - G 79 -18.3 -2.6063 | overlap 1045257 1045256 CGCACCCACAACCCA GCCGGGCGCGGGGAG CAC CCCGCCGCGTCCGGC CCGCGCCGGGGCCGG Tfu_0885 1046609 - 1045434 - | putative glutathione-dependent aldehyde dehydrogenase Tfu_0886 1047681 - 1046773 - | catalase TERM 676 1047064 - 1047094 + g 72 -13.3 -3.25093 | gap 1, opp_overlap 1047063, overlap 1047061 TTCTTCGTCGAAGAG CGCGTTGG-GGGCG ATGG CGCCCTCCAACCCG TCTTCCTTGAGCTCT Tfu_0887 1048839 - 1047916 - | RNA polymerase sigma-B factor Tfu_0888 1049091 - 1050158 + | ketoacyl reductase Tfu_0889 1050286 - 1051104 + | hypothetical protein Tfu_0890 1051101 - 1051835 + | hypothetical protein Tfu_0891 1052268 - 1051891 - | hypothetical protein Tfu_0892 1052399 - 1052878 + | hypothetical protein TERM 677 1053352 - 1053328 - g 70 -12.1 -3.31263 | ATTGCAGCGGGAGAA CCGGGCCCG TACCCGC CAGGCCCGG CAGTGACCTGGACCG Tfu_0893 1052954 - 1053358 + | hypothetical protein Tfu_0894 1054408 - 1053404 - | putative glycosyltransferase Tfu_0895 1054537 - 1055484 + | hypothetical protein TERM 678 1055915 - 1055863 - g 74 -16.2 -2.79183 | gap 2, overlap 1055889 GCCAGCGGCACCACA GCCG-GGC-CGGGCACCCCGGCAGCA CAG TGCCGCCGCGGGCCCCGCGCCACAGC CGCACCGCACCCCGC Tfu_0896 1055764 - 1056033 + | hypothetical protein Tfu_0897 1056048 - 1057451 + | ADP-heptose:LPS heptosyltransferase TERM 679 1058688 - 1058703 + G 85 -11.8 -4.25104 | GATCGCCGGGGCGGA CCGGGC CGCG GCCCGG TTTTCGTGGGAGACC Tfu_0898 1057582 - 1058805 + | hypothetical protein Tfu_0899 1060869 - 1058836 - | V8-like Glu-specific endopeptidase TERM 680 1060163 - 1060175 + g 82 -9.1 -4.42062 | TGGAGGAGTCGGCTG TCGCG GAC CGCGA TTTCTTTGAGGCGTC TERM 681 1060393 - 1060434 + g 74 -13.7 -3.34962 | GGGGACGCGGGGCTG CAGGTCTGCGTCGACTTCG GCGG CGAATTCGGCGACGACCTG TTCTGCGGTCTCGGG TERM 682 1060974 - 1060997 + H 74 -4.6 -4.55826 | gap 1, opp_overlap 1060962 1060958, overlap 1060949 1060975 GGAGAAAACTGTCGG TTTCC-CGGGT GTC ATCCGCGGAAG TTTTGGTGTTTTCGC TERM 683 1061118 - 1061091 - H 100 -9.8 -5.46657 | opp_overlap 1061091 TATCGGAATAAAAAA CCGGTTCACCAG AAAA CGGCTGAACCGG TTGTGTGAACTGGAC Tfu_0900 1061243 - 1062604 + | mannan endo-1,4-beta-mannosidase TERM 684 1062647 - 1062677 + T 100 -27.6 -3.29471 | opp_overlap 1062647 GAACCACGGAGAGAA GCGGCCCGCGGGGC TGA GCCTCGCGGGCCGC TTGCTGTGCTCAGGG TERM 685 1062677 - 1062647 - T 100 -25.4 -3.5361 | opp_overlap 1062647 GAACCACGGAGAGAA GCGGCCCGCGGGGC TGA GCCTCGCGGGCCGC TTGCTGTGCTCAGGG Tfu_0901 1064116 - 1062716 - | cellulase Tfu_0902 1064369 - 1065001 + | DNA polymerase III, epsilon subunit Tfu_0903 1065781 - 1065248 - | putative acetyltransferase TERM 686 1065338 - 1065359 + g 71 -10.1 -3.78934 | CTCCATACCGATACG GCGTGCCGT GGCG ATGGCGCGC TTGTTCTCCGCCCGG Tfu_0904 1066515 - 1065844 - | hypothetical protein Tfu_0905 1066618 - 1067328 + | hypothetical protein Tfu_0906 1067976 - 1067359 - | hypothetical protein Tfu_0907 1068320 - 1069144 + | DeoR family transcriptional regulator TERM 687 1069172 - 1069145 - T 70 -14 -2.52464 | GTCCCGTTGAACTGA GCCGCCTGCGGG TTAG CCCGCGGGCGGG TCCGGGCAGCACAGC Tfu_0908 1069618 - 1069157 - | hypothetical protein TERM 688 1070571 - 1070608 + G 75 -4.8 -4.57341 | gap 1, opp_overlap 1070593, overlap 1070576 CGCGGATATTACTCG CGAGTTGCTTTCTGCGG AGAAC CCGCCGAGCGCA-CTTG TTTTTGACAACGATT Tfu_0909 1069870 - 1070886 + | LacI family transcription regulator Tfu_0910 1071235 - 1072953 + | ABC-type dipeptide/oligopeptide/nickel transport systems, periplasmic components Tfu_0911 1073070 - 1074065 + | ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Tfu_0912 1074062 - 1074976 + | ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Tfu_0913 1074980 - 1075930 + | oligopeptide/dipeptide ABC transporter, ATP-binding protein Tfu_0914 1075935 - 1076867 + | ABC-type oligopeptide transport system ATPase component TERM 689 1076886 - 1076920 + F 80 -15 -3.04461 | CTAGTTCGCCGTCGA GCCGGCCAGCGGCT GGCTGAG AGTCGCTGACCGGC TCTTCGGCGTGCCTG Tfu_0915 1077129 - 1079651 + | beta-mannosidase Tfu_0916 1080342 - 1079776 - | putative secreted protein Tfu_0917 1080506 - 1081129 + | hypothetical protein Tfu_0918 1081194 - 1081847 + | hypothetical protein Tfu_0919 1082087 - 1081812 - | hypothetical protein Tfu_0920 1082547 - 1082098 - | AsnC family transcriptional regulator TERM 690 1082614 - 1082601 - H 78 -3.7 -4.74801 | opp_overlap 1082601 GAATGGCAGGAAAAA CGTCG TGAT CGCCG TGGATTGCGCCTTCC Tfu_0921 1082705 - 1083565 + | tryptophan 2,3-dioxygenase Tfu_0922 1083607 - 1084848 + | kynureninase TERM 691 1084869 - 1084908 + F 80 -15.8 -2.87683 | gap 2, overlap 1084870 GCGGAAGCGGCGTAA C--CGTGCGGGCGGTCCG GTGATG CGGGCCGCCCGCACGTCG TCTCTCGGGGAGTGT TERM 692 1084870 - 1084905 + F 100 -25.5 -2.69151 | overlap 1084869 CGGAAGCGGCGTAAC CGTGCGGGCGGTCCG GTGATG CGGGCCGCCCGCACG TCGTCTCTCGGGGAG TERM 693 1084942 - 1084953 + F 83 -2.2 -5.11112 | AGAGAGGCCACGCTG GGTG ATTT TACC TTTTTATTAACGTTT Tfu_0923 1085257 - 1086105 + | hypothetical protein TERM 694 1086177 - 1086147 - f 80 -14.7 -3.06302 | gap 1 AGGATGCGCAGCGAA CCCTGCCGGTCCCG GCAC CGGG-CAGGCAGGG AGGAGACCGCGCCGC Tfu_0924 1086332 - 1087471 + | putative ADP-ribosylglycohydrolase TERM 695 1087591 - 1087534 - f 79 -3.8 -4.96762 | opp_overlap 1087541 1087542, overlap 1087525 1087535 1087536 CACAGAGCAGAAAAA GTCCGCCAGCTTCGGGGATTCGCGGG CCAGAT CCCGCGAATCCCCCTAGCATTCTGGG ACGTGGCAACGGACC TERM 696 1087541 - 1087584 + F 90 -16.7 -3.30124 | opp_overlap 1087536 1087535 1087534, overlap 1087542 CAGAAAAAGTCCGCC AGCTTCGGGGATTCGCGGG CCAGAT CCCGCGAATCCCCCTAGCA TTCTGGGACGTGGCA TERM 697 1087542 - 1087583 + F 91 -20.2 -2.57931 | opp_overlap 1087536 1087535 1087534, overlap 1087541 AGAAAAAGTCCGCCA GCTTCGGGGATTCGCGGG CCAGAT CCCGCGAATCCCCCTAGC ATTCTGGGACGTGGC Tfu_0925 1087628 - 1089376 + | hypothetical protein Tfu_0926 1089500 - 1090441 + | hypothetical protein TERM 698 1090877 - 1090819 - g 78 -14.3 -3.61715 | gap 1 GATGGGCTTCAACAA CGAGGGCTC-GCAGGCGGTGTCGGAGCG GCTG CGCGCCCACCGCGCCCGCCGGGCCCGCG ACCTCATCGTCGGGG Tfu_0927 1090451 - 1091584 + | dihydroorotate dehydrogenase 2 TERM 699 1091624 - 1091669 + T 78 -16.1 -2.78384 | opp_overlap 1091630 1091632, overlap 1091632 CGCTGGCTGCCGTGC AGCACAGACCCCTGACGGGCG CTGC CGCGGGTCAGGGGTCTGTCCG TGTCCTGCGCGGGCA TERM 700 1091663 - 1091630 - T 81 -16.7 -2.78384 | opp_overlap 1091624 1091632, overlap 1091632 CTGCCGTGCAGCACA GACCCCTGACGGGCG CTGC CGCGGGTCAGGGGTC TGTCCGTGTCCTGCG TERM 701 1091661 - 1091632 - T 71 -13.5 -2.94099 | opp_overlap 1091632 1091624, overlap 1091630 GCCGTGCAGCACAGA CCCCTGACGGGCG CTGC CGCGGGTCAGGGG TCTGTCCGTGTCCTG TERM 702 1091632 - 1091661 + T 71 -13.5 -2.93858 | opp_overlap 1091630 1091632, overlap 1091624 GCCGTGCAGCACAGA CCCCTGACGGGCG CTGC CGCGGGTCAGGGG TCTGTCCGTGTCCTG Tfu_0928 1092655 - 1091690 - | fructokinase TERM 703 1091940 - 1091882 - G 82 -16.7 -3.28924 | gap 2, overlap 1091866 CAGTCCGGCGCAGAA CGC-GTCCCCGGCGCC-GATGCTGTCGAC GAC GTCGACCGGTTCCGGCGCCACGGACAGCG GCCGGTCCTCGCGGC TERM 704 1092784 - 1092756 - R 100 -19.6 -4.36903 | opp_overlap 1092779 CTCAGGAAAGAGAAA CGGGAGCGCGGA GAGGG CCCGCGCTCCCG TGAGGGTGGGGAAGC Tfu_0929 1093829 - 1092801 - | hypothetical protein Tfu_0930 1095593 - 1094520 - | hypothetical protein Tfu_0931 1095933 - 1096931 + | ABC-type metal ion transport system ATPase component Tfu_0932 1096928 - 1097611 + | putative ABC transporter permease protein Tfu_0933 1097681 - 1098538 + | ABC transport system substrate-binding protein TERM 705 1098570 - 1098598 + F 100 -18.3 -5.50313 | overlap 1098559 1098561 1098555 CAGCGTGGCGCAGTG CCGCCTGGTTTTT CTG GAAAACCAGGCGG TTTTTTCGTTTTCTG Tfu_0934 1098773 - 1100071 + | putative solute binding lipoprotein Tfu_0935 1100298 - 1101284 + | multiple sugar transport system permease protein Tfu_0936 1101284 - 1102198 + | multiple sugar transport system permease protein Tfu_0937 1102195 - 1103649 + | beta-galactosidase TERM 706 1103736 - 1103680 - f 89 -12.7 -4.18802 | opp_overlap 1103729, overlap 1103681 ATAGATAGGTCAAAA TCTCGCCGTCCCGGCGGCTTCCACGGT ACA AACAAGGAGGATGCCGGGACGGCGCGG TCGTGGGTTGGGGGA TERM 707 1103735 - 1103681 - f 82 -16.2 -3.10558 | opp_overlap 1103729, overlap 1103680 TAGATAGGTCAAAAT CTCGCCGTCCCGGCGGCTTCCACGGT ACA AACAAGGAGGATGCCGGGACGGCGCG GTCGTGGGTTGGGGG Tfu_0938 1103758 - 1104780 + | LacI family transcription regulator Tfu_0939 1105175 - 1105867 + | hypothetical protein TERM 708 1106428 - 1106401 - g 79 -11.2 -4.09519 | gap 1, overlap 1106419 ACGAGCGACAAACAA CGGCGCTGACGCC AAG GACGAC-GCGCCG GAGCAGGCCGAGAAG TERM 709 1108813 - 1108755 - g 71 -10.9 -3.64703 | gap 2 CGCCGCGCACGGAAA CCCCGCGTCCGGAGACCCCGCGTCCGGAG ACC CCGCGGAC-CGAGA-CTCCGCGCACGGAG AGCCCGGCGGACACC Tfu_0940 1106378 - 1109611 + | signal transduction histidine kinase Tfu_0941 1109813 - 1110214 + | hypothetical protein Tfu_0942 1110235 - 1110729 + | hypothetical protein Tfu_0943 1110764 - 1111351 + | putative ATP/GTP-binding protein TERM 710 1111369 - 1111397 + F 100 -12.3 -5.02476 | opp_overlap 1111361, overlap 1111370 1111371 AAGATTACCGAGGAT TCGGGTCCGGCAC CTG GTGCCGGGCCCCC TTTTTTGCCGCGTCT TERM 711 1111370 - 1111396 + F 90 -15.8 -3.60762 | opp_overlap 1111361, overlap 1111369 1111371 AGATTACCGAGGATT CGGGTCCGGCAC CTG GTGCCGGGCCCC CTTTTTTGCCGCGTC TERM 712 1111371 - 1111395 + F 90 -19.3 -2.75975 | opp_overlap 1111361, overlap 1111370 1111369 GATTACCGAGGATTC GGGTCCGGCAC CTG GTGCCGGGCCC CCTTTTTTGCCGCGT Tfu_0944 1111462 - 1112253 + | 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1 4-benzoquinol methylase Tfu_0945 1112390 - 1112824 + | CBS domain-containing protein Tfu_0946 1114058 - 1112904 - | butyryl-CoA dehydrogenase Tfu_0947 1116148 - 1114058 - | putative acetyl/propionyl CoA carboxylase alpha subunit: biotin carboxylase TERM 713 1115857 - 1115873 + g 72 -9.3 -4.07568 | opp_overlap 1115839 1115836 1115834 CGGCCGCAGTGCAGG CGCGGGC GAA GCCGGCG TTTTCGGCGAGGAAC Tfu_0948 1117798 - 1116173 - | propionyl-CoA carboxylase Tfu_0949 1117898 - 1118470 + | TetR family transcriptional regulator Tfu_0950 1118547 - 1119902 + | NADH dehydrogenase Tfu_0951 1120195 - 1119989 - | putative metal-binding protein Tfu_0952 1120519 - 1120232 - | hypothetical protein Tfu_0953 1121265 - 1120621 - | hypothetical protein Tfu_0954 1121391 - 1121708 + | hypothetical protein Tfu_0955 1121823 - 1122485 + | hypothetical protein Tfu_0956 1122517 - 1123191 + | putative phosphatase TERM 714 1123205 - 1123245 + T 80 -15.9 -2.87564 | GAGGCGGGCGAGCAT GGCAACGGGGCGGCACCCG TGG TGGGCGCCGCCCCGCAGCA TGTGTGGCGACGTGG Tfu_0957 1123887 - 1123273 - | superoxide dismutase TERM 715 1123985 - 1123999 + r 71 -7.8 -4.11484 | TTCTGTTCGGTATCG CCTCTG CCA CAGGGG TTTTCGACGGTTGCG Tfu_0958 1124636 - 1124181 - | hypothetical protein TERM 716 1124767 - 1124715 - R 71 -14.2 -2.78384 | overlap 1124718 GGCTTGGGGATTACA GTACCGCCCCGCGAACGGGGA-CG GGCCGGA CGCTCCCCGCTTGCGGGGCGG-AG GGTGCCGCGGGCCCC TERM 717 1124765 - 1124718 - R 100 -22.8 -2.66316 | gap 1, overlap 1124715 TTGGGGATTACAGTA CCGCCCCGCGAACGGGGA-CG GGCCGGA CGCTCCCCGCTTGCGGGGCGG AGGGTGCCGCGGGCC Tfu_0959 1125159 - 1124788 - | hypothetical protein TERM 718 1125393 - 1125413 + r 81 -4.7 -4.93296 | CACGGGGGAGAACCG GATTGCGTA ATG TCCGTAATC TTTTTCTGGTCCTGC Tfu_0960 1126695 - 1125565 - | O-succinylbenzoate synthase TERM 719 1126850 - 1126812 - R 77 -12.2 -3.64703 | opp_overlap 1126812, overlap 1126814 GCGGGGTGACGGAAA GACGGTGCCGCGGGGCAG GGG CTATCCCGCGGCCACGAC TTCGGTGACGGTGCG TERM 720 1126848 - 1126814 - R 77 -13.4 -3.40597 | opp_overlap 1126812, overlap 1126812 GGGGTGACGGAAAGA CGGTGCCGCGGGGCAG GGG CTATCCCGCGGCCACG ACTTCGGTGACGGTG Tfu_0961 1127954 - 1126833 - | L-alanine dehydrogenase Tfu_0962 1129492 - 1128068 - | dihydroorotase TERM 721 1130495 - 1130509 + G 70 -8.5 -3.9461 | GTCGCCTTGTGGGTG GGCGG GCTGG CCGCC TTGTTCTTCCACGCG Tfu_0963 1129826 - 1131904 + | hypothetical protein TERM 722 1131986 - 1131932 - T 81 -14.3 -3.53012 | gap 2, opp_overlap 1131944 1131948, overlap 1131942 GCGGGCCTGCGTAAA CGGGCAGACAGGCGAAGGGGGCCGCCC GCA GGGCGGCCCCCTTGG--TGTGTGCGTG TCCCCGCATCCGGCG TERM 723 1131978 - 1131942 - T 87 -17.9 -2.90714 | opp_overlap 1131944 1131948, overlap 1131932 GTAAACGGGCAGACA GGCGAAGGGGGCCGCCC GCA GGGCGGCCCCCTTGGTG TGTGCGTGTCCCCGC TERM 724 1131944 - 1131976 + T 100 -24.9 -2.93382 | opp_overlap 1131942 1131932, overlap 1131948 AAACGGGCAGACAGG CGAAGGGGGCCGCCC GCA GGGCGGCCCCCTTGG TGTGTGCGTGTCCCC TERM 725 1131948 - 1131972 + T 100 -24.3 -3.33261 | opp_overlap 1131942 1131932, overlap 1131944 GGGCAGACAGGCGAA GGGGGCCGCCC GCA GGGCGGCCCCC TTGGTGTGTGCGTGT Tfu_0964 1132579 - 1132169 - | hypothetical protein Tfu_0965 1133409 - 1132657 - | hypothetical protein TERM 726 1133475 - 1133437 - R 100 -18.9 -3.53811 | gap 2, opp_overlap 1133457, overlap 1133438 TCCACCGCGGGTAAA GGGACGGTAAGGGCGGGGC CGC GCCCCGCCCTG-CCG-CCC TGGTGCGCGGGGGCT TERM 727 1133475 - 1133438 - R 100 -21.3 -2.72144 | gap 1, opp_overlap 1133457, overlap 1133437 CCACCGCGGGTAAAG GGACGGTAAGGGCGGGGC CGC GCCCCGCCCTG-CCGCCC TGGTGCGCGGGGGCT Tfu_0966 1134148 - 1133489 - | caffeoyl-CoA O-methyltransferase Tfu_0967 1134887 - 1134174 - | putative integral membrane protein TERM 728 1135022 - 1135039 + r 74 -4.7 -4.50583 | opp_overlap 1134994, overlap 1135025 GCCGGATACGGCCAC CGTCCCG CACG CGGGCTG TTTTCTCCTCCTGTT TERM 729 1135457 - 1135505 + r 88 -15.4 -3.3164 | gap 2, opp_overlap 1135405 1135464, overlap 1135460 CGCCACGCACGCGGG GAAG-CCACGGCGGCAGGC-TCGG CCG CTGGTGTCTGCCGCCGTCGACTTC TTCTCCCAGTGCCTT TERM 730 1135460 - 1135502 + r 77 -11.3 -3.79906 | gap 2, opp_overlap 1135464, overlap 1135457 CACGCACGCGGGGAA G-CCACGGCGGCAGGC-TCGG CCG CTGGTGTCTGCCGCCGTCGAC TTCTTCTCCCAGTGC Tfu_0968 1136417 - 1135566 - | methionine aminopeptidase Tfu_0969 1136456 - 1136680 + | hypothetical protein TERM 731 1137162 - 1137197 + G 78 -8.9 -4.25104 | overlap 1137153 TCCTGCCGGACAGCC GCGTGGTGGCCGCGT TCCACC ACGTGTCCGCCGTGC TTTTGCTGGACCCCG Tfu_0970 1136729 - 1137427 + | reduced coenzyme F420:NADP oxidoreductase Tfu_0971 1141170 - 1137502 - | putative DNA methylase TERM 732 1141104 - 1141132 + g 74 -13.1 -3.65046 | opp_overlap 1141122, overlap 1141093 1141085 CTTCGCTGCGCTCAC GCAGGTCCTCTTC AAG GACGCGGACCTGC TTCTTCAAGTCGGCA Tfu_0972 1142181 - 1141996 - | hypothetical protein Tfu_0973 1142889 - 1142695 - | hypothetical protein Tfu_0974 1143740 - 1142886 - | helix-hairpin-helix DNA-binding motif-containing protein Tfu_0975 1143883 - 1144233 + | hypothetical protein Tfu_0976 1144233 - 1144709 + | hypothetical protein TERM 733 1144864 - 1144845 - T 100 -7.8 -5.18643 | overlap 1144846 GCAACTAAAAGAAAA GGGTGTCC CCGT GCACACCC ACCGGGAACACCGTG TERM 734 1144876 - 1144846 - T 71 -9.8 -3.69559 | gap 1, overlap 1144845 1144875 CAACTAAAAGAAAAG GGTGTCCCC-GTG CACACC CACCGGGAACACC GTGGAAGCACGCCGG TERM 735 1144959 - 1144915 - T 79 -15 -3.02144 | CCAGCCCTGGGAACA CCCGAACCCCGCCCCTGTCC AGCAG AGACACGGGCAGGCTTCAGG ACTTCCCCTATTGCG Tfu_0977 1146071 - 1145223 - | helix-hairpin-helix DNA-binding motif-containing protein TERM 736 1146598 - 1146540 - g 73 -8 -4.19177 | gap 3, opp_overlap 1146543, overlap 1146541 ACTGTGCAACACAAA CCCGCGGCCCGCCCGCCCCACGGCAGCAG CGCG CCGC-ACCG-GGGGCAGGGGAGCCGCTT- AATGATGGAACACCT TERM 737 1146598 - 1146541 - g 72 -14 -3.11024 | gap 2, opp_overlap 1146543, overlap 1146540 CTGTGCAACACAAAC CCGCGGCCCGCCCGCCCCACGGCAGCAG CGCG CCGC-ACCG-GGGGCAGGGGAGCCGCTT AATGATGGAACACCT Tfu_0978 1146256 - 1146600 + | hypothetical protein TERM 738 1146713 - 1146693 - g 100 -11.1 -4.89233 | overlap 1146684 GAGGAAGACGAAAAA CCGCTCGTC TCC GACGAGTGG GAGATGCCCGCGGAA Tfu_0979 1146600 - 1147205 + | hypothetical protein TERM 739 1147369 - 1147353 - T 86 -15.1 -3.54741 | CAGCATGCCCCCAAA CCCCCGC GTG GCGGGGG AGCAGTGCCGTGGAC TERM 740 1147572 - 1147518 - T 100 -23.7 -2.86164 | gap 1, overlap 1147513 GCCGGAACCAGTACA GCC-CGGGTCGGGTCCGTGCCG ATCACCAGCCCG CGGCACGGGCCCGACCCGCGGC ACCCCAGGGGCCGGG Tfu_0980 1148687 - 1147650 - | putative oxidoreductase TERM 741 1148790 - 1148769 - R 100 -18.7 -4.55295 | CGGGGGAGAAAGAAA CCCCGCGGC ACGC GCCGCGGGG CCCACACTATGCGGA panB 1149658 - 1148816 - | 3-methyl-2-oxobutanoate hydroxymethyltransferase TERM 742 1149903 - 1149878 - R 95 -17.6 -3.86283 | CGAACGCACAGCAAA GCGGGTGGCC TGGCGC GGCCACCCGC ATCCGGAAACCGGAA Tfu_0982 1151282 - 1149921 - | L-glutamine synthetase Tfu_0983 1151497 - 1153230 + | NH(3)-dependent NAD(+) synthetase TERM 743 1153240 - 1153270 + T 70 -11.2 -3.37091 | opp_overlap 1153239 1153242, overlap 1153235 GTCTAGACAGCACAC GAGGCGGTGG CGAAAAACGGT CCACCGCCTC TTCGGTTTTCGGGCT Tfu_0984 1153740 - 1153285 - | hypothetical protein TERM 744 1153709 - 1153679 - G 83 -15.5 -3.54459 | GCAAGCCCTGCGAAA GACACCGCCCC GGGAGGGGA GGGGCGGTGTC GCCCTGGAAGCGCGC TERM 745 1153819 - 1153774 - R 78 -13.3 -3.53012 | overlap 1153775 CCGGCGCCTCGCAAA CTGCCGCTACCTCCCCG GCGGGGGAGGAA CGGGGAGGTAGCGGCCT CAGGGTCAGCGCCAG TERM 746 1153818 - 1153775 - R 81 -16.8 -2.71712 | overlap 1153774 CGGCGCCTCGCAAAC TGCCGCTACCTCCCCG GCGGGGGAGGAA CGGGGAGGTAGCGGCC TCAGGGTCAGCGCCA Tfu_0985 1155642 - 1153825 - | alpha amylase domain-containing protein Tfu_0986 1159117 - 1155995 - | glutamate-ammonia-ligase adenylyltransferase TERM 747 1157761 - 1157747 - G 72 -4.2 -4.57073 | CACCCGCCGCAAAAA GCGG TACGCAT CCGC CAACGCCGCCGCATC Tfu_0987 1159180 - 1159503 + | small multidrug resistance efflux protein TERM 748 1159638 - 1159593 - T 93 -17.5 -3.35679 | overlap 1159635 CGCGCCCATGCAGAA CCGCCCCGGTGGGGCGCCCCA CACC TGGGACACCCCACCACACCGG AGCCCTTCCCCCGGG Tfu_0988 1161127 - 1159703 - | L-glutamine synthetase Tfu_0989 1161886 - 1161596 - | hypothetical protein TERM 749 1161901 - 1161846 - G 79 -11 -4.09685 | gap 1, overlap 1161852 TCTGAGGCCCGAAAA CGACAACTGGCGCTGCCGGAACCCGGG ACA CCCGG-TTCCACCAGCGCCAGAAAACC CTGGACGAAACAGGA TERM 750 1161895 - 1161852 - G 100 -24 -3.68359 | gap 1, overlap 1161846 GCCCGAAAACGACAA CTGGCGCTGCCGGAACCCGGG ACA CCCGG-TTCCACCAGCGCCAG AAAACCCTGGACGAA Tfu_0990 1162645 - 1161917 - | putative integral membrane protein TERM 751 1162713 - 1162670 - R 81 -7.3 -4.57837 | gap 2, overlap 1162671 1162673 1162675 ATAGGTCGGGAAAAA GGACATGTGGGACGGCGGCGG GCGA CCACCGCCG-CCC-CAGGACA AACAACGTTACGATT TERM 752 1162710 - 1162673 - R 71 -12 -3.23708 | gap 2, overlap 1162671 1162670 1162675 GGTCGGGAAAAAGGA CATGTGGGACGGCGGCGG GCGA CCACCGCCG-CCC-CAGG ACAAACAACGTTACG TERM 753 1162710 - 1162675 - R 83 -14.6 -3.18031 | overlap 1162673 1162671 1162670 TCGGGAAAAAGGACA TGTGGGACGGCGGCGG GCGA CCACCGCCGCCCCAGG ACAAACAACGTTACG Tfu_0991 1163659 - 1162721 - | lipoyl synthase lipB 1164419 - 1163709 - | lipoyltransferase TERM 754 1164230 - 1164255 + g 78 -13.3 -3.55071 | gap 1 CACCCGGGTCGGTCA GCGGAC-GGTCC CAC GGGCCAGTCCGC TTTCCCGCGGTGTAC TERM 755 1164577 - 1164550 - R 71 -12 -3.29471 | gap 1, opp_overlap 1164535 GCCTGATTACATCAA GCTTGTC-CGGCG GTT CGCCGCGACAGGC ACGTCTCGGCACCGG Tfu_0993 1166492 - 1164750 - | 2-oxoglutarate dehydrogenase E2 component TERM 756 1166571 - 1166534 - R 95 -15.5 -4.18019 | overlap 1166537 AGAACGACAGAGAAA GATGATGGGCGGGCTCC CTCG GGCACCCGCCCATCTCC AAGAATCAGTCGTGG TERM 757 1166568 - 1166537 - R 89 -18 -2.79517 | overlap 1166534 ACGACAGAGAAAGAT GATGGGCGGGCTCC CTCG GGCACCCGCCCATC TCCAAGAATCAGTCG Tfu_0994 1167956 - 1166577 - | dihydrolipoamide dehydrogenase Tfu_0995 1169536 - 1168037 - | leucyl aminopeptidase Tfu_0996 1170504 - 1169743 - | cobalamin-5'-phosphate synthase Tfu_0997 1171469 - 1170501 - | adenosylcobinamide kinase Tfu_0998 1171692 - 1171898 + | hypothetical protein Tfu_0999 1175508 - 1172005 - | hypothetical protein Tfu_1000 1176755 - 1175505 - | phosphoesterase YhaO-putative DNA repair exonuclease Tfu_1001 1176990 - 1177349 + | hypothetical protein TERM 758 1177936 - 1177898 - g 93 -17.4 -3.5774 | opp_overlap 1177901, overlap 1177901 AGCCAAGGGCTGAAA GACGTCGGCACCGGCATC TGG GACGCGGGCGCCGACTTC GTCACCGGGATCAAA TERM 759 1177933 - 1177901 - g 77 -17.7 -2.6162 | opp_overlap 1177901, overlap 1177898 CAAGGGCTGAAAGAC GTCGGCACCGGCATC TGG GACGCGGGCGCCGAC TTCGTCACCGGGATC TERM 760 1177901 - 1177933 + G 72 -13.3 -3.14344 | opp_overlap 1177901 1177898 CAAGGGCTGAAAGAC GTCGGCACCGGCATC TGG GACGCGGGCGCCGAC TTCGTCACCGGGATC Tfu_1002 1177487 - 1179331 + | hedgehog/intein hint, N-terminal TERM 761 1179372 - 1179357 - f 70 -4.6 -4.42513 | AAGGAGAAACAGAAA GCTCGC GCAA GGGAGC AGGCCCGGGGAAGCC TERM 762 1179503 - 1179479 - f 73 -9.9 -3.8211 | CCGCAGGCAGAACAA CGGGGTGCC CGCACAC GGCGCCCCG GCCACAAGCGGAGAA TERM 763 1179721 - 1179708 - g 79 -2.3 -4.82901 | GCTCGCGGAGAAAAA GGACG TTTC CGTGC CGCAAGCCTACGTCG Tfu_1003 1179574 - 1180044 + | hypothetical protein TERM 764 1180172 - 1180117 - T 100 -25.5 -2.89191 | gap 1, opp_overlap 1180118 CGACACCCGCACACA CCCGACGCGGCACGCCCGGGCGGACG CGAAC CGTCCACCCAGACGTGCCGCG-CACG ATATTCAGGGCGCCG TERM 765 1180118 - 1180173 + T 85 -16.7 -3.01791 | gap 1, opp_overlap 1180117 GACACCCGCACACAC CCG-ACGCGGCACGCCCGGGCGGACG CGAAC CGTCCACCCAGACGTGCCGCGCACGA TATTCAGGGCGCCGT Tfu_1004 1181256 - 1180252 - | K+ channel beta subunit Tfu_1005 1181964 - 1181320 - | putative integral membrane protein Tfu_1006 1182075 - 1182815 + | hypothetical protein Tfu_1007 1182812 - 1183096 + | hypothetical protein TERM 766 1183114 - 1183145 + F 100 -17.3 -4.05788 | overlap 1183116 GCGCTCACCGGTCCG GACGGGGCCGCCA CGACCC TGGCGGCCCCGTG TTTCGTTTCCGGCCC TERM 767 1183116 - 1183143 + F 100 -19.9 -3.62354 | overlap 1183114 GCTCACCGGTCCGGA CGGGGCCGCCA CGACCC TGGCGGCCCCG TGTTTCGTTTCCGGC Tfu_1008 1183238 - 1184158 + | heat shock protein HtpX Tfu_1009 1184162 - 1184782 + | hypothetical protein TERM 768 1185493 - 1185449 - g 70 -9.1 -3.89346 | TTCGGACCGCAGAAA GGCGCGGACGCCGCCCAAG TCCAGCG CCTGGACGCCGCGCTCGCC CACTTCGCGGACCTC TERM 769 1185810 - 1185800 - g 70 -8.2 -3.9461 | overlap 1185801 GTCGCGGAAGAAGAA GCCG CCG CGGC AGGCGTCACCGCAGC Tfu_1010 1184840 - 1185931 + | glycerate kinase Tfu_1011 1186139 - 1186489 + | HesB/YadR/YfhF TERM 770 1186526 - 1186558 + F 91 -17 -3.79071 | gap 1 CGCCGTGAAGGCTAC GGGCCCGCCCCACCC CCGT GGGTGAG-CGGGCCC TTTCGCTGTTCTGCG TERM 771 1187587 - 1187556 - g 77 -10.8 -3.95584 | gap 1 GGCTGACCAAGGAAA GCCTGCTGGAGCGGA TGG CCCGCTCCTAC-GGC GACGACGCAGCGGCC Tfu_1012 1186652 - 1187626 + | putative carbohydrate kinase rpsD 1187971 - 1188582 + | 30S ribosomal protein S4 Tfu_1014 1188896 - 1188660 - | putative aminotransferase TERM 772 1189131 - 1189141 + H 81 -3.2 -5.0538 | CGCGATAATGTTTCC GCTT GAC AGGC TTTTTTGGCATAGGA TERM 773 1189264 - 1189223 - g 82 -16.5 -3.2614 | gap 1, opp_overlap 1189262, overlap 1189224 GACCCGCCATAGGAA TCGGCGCCACGCGCTGCGCC GAT GG-GCACCACGCGGCGCCGT GCTCGCCGCGCTGGC TERM 774 1189263 - 1189224 - g 82 -20 -2.5547 | gap 1, opp_overlap 1189262, overlap 1189223 ACCCGCCATAGGAAT CGGCGCCACGCGCTGCGCC GAT GG-GCACCACGCGGCGCCG TGCTCGCCGCGCTGG Tfu_1015 1189200 - 1190144 + | cytochrome c oxidase subunit II TERM 775 1190241 - 1190224 - g 75 -9.9 -4.07568 | CCCCGGGCTCGAAAA TCGTCAG CTGG CTGACGA CAACCGATCACAAGG TERM 776 1190263 - 1190245 - g 76 -13.2 -3.40403 | opp_overlap 1190246 1190247 1190255, overlap 1190255 GCTGGCTGACGACAA CCGATCAC AAG GTGATCGG GTACATGTACCTGAT TERM 777 1190255 - 1190282 + G 70 -15 -2.77167 | opp_overlap 1190245 1190255, overlap 1190247 1190246 GACAACCGATCACAA GGTGATCGGGTA CATG TACCTGATCACC TCGTTCGCATTCTTC TERM 778 1190282 - 1190255 - g 73 -12.8 -3.45033 | opp_overlap 1190255 1190247 1190246, overlap 1190245 GACAACCGATCACAA GGTGATCGGGTA CATG TACCTGATCACC TCGTTCGCATTCTTC Tfu_1016 1190145 - 1191836 + | cytochrome-c oxidase Tfu_1017 1191849 - 1192274 + | integral membrane protein TERM 779 1192326 - 1192293 - f 100 -13.2 -4.78237 | gap 1, opp_overlap 1192295, overlap 1192295 GATTCCAGAACAAAA CAGGGCGGCGCTTCC TTCGC GGAA-CGCCGCCCTT TCGATATCTTTCTGA TERM 780 1192295 - 1192324 + F 90 -15.8 -3.79565 | gap 1, opp_overlap 1192293 1192295 TTCCAGAACAAAACA GGGCGGCGCTTCC TTCGC GGAA-CGCCGCCC TTTCGATATCTTTCT TERM 781 1192324 - 1192295 - f 95 -15.8 -4.00512 | gap 1, opp_overlap 1192295, overlap 1192293 TTCCAGAACAAAACA GGGCGGCGCTTCC TTCGC GGAA-CGCCGCCC TTTCGATATCTTTCT TERM 782 1192346 - 1192387 + F 100 -8.1 -5.25735 | gap 2 TATCTTTCTGATCAC GGGCC-ACG-TACGTGTCG AAATTG TGACACGTAACGACGGCCC TTTTTGCTTTTTTCC Tfu_1018 1192486 - 1193838 + | hypothetical protein TERM 783 1193870 - 1193895 + T 100 -18.3 -3.96148 | gap 1 CCGCCACACGGCGAA GGCCCCCGCACC GCT GG-GCGGGGGCC TTTCTCGTGCCAGAA TERM 784 1194222 - 1194189 - T 100 -24.7 -3.21276 | opp_overlap 1194184, overlap 1194192 GCTGCGCGCACAAGA GAAGGCCCGACAGGG AAAC CCCTGCCGGGCCTTC AGCCGGTCTGTGGGC TERM 785 1194219 - 1194192 - T 100 -20.6 -3.7511 | opp_overlap 1194184, overlap 1194189 GCGCGCACAAGAGAA GGCCCGACAGGG AAAC CCCTGCCGGGCC TTCAGCCGGTCTGTG Tfu_1019 1195897 - 1194251 - | ubiquinol-cytochrome c reductase, cytochrome b subunit Tfu_1020 1196994 - 1195897 - | ubiquinol-cytochrome c reductase iron-sulfur subunit TERM 786 1196596 - 1196542 - G 72 -14.3 -3.11619 | opp_overlap 1196553, overlap 1196530 1196545 GAAGAACTCACTGAA GGAGCTCTTCTCCTCCTCCGACGAA GGAAG TTCGTCGTAGGGGGAGGAGACCTCG TAGTGCGGCAGGACT TERM 787 1196593 - 1196545 - G 70 -14.6 -2.76189 | opp_overlap 1196553, overlap 1196530 1196542 GAACTCACTGAAGGA GCTCTTCTCCTCCTCCGACGAA GGAAG TTCGTCGTAGGGGGAGGAGACC TCGTAGTGCGGCAGG Tfu_1021 1197910 - 1196987 - | ubiquinol-cytochrome c reductase cytochrome c subunit Tfu_1022 1198511 - 1197927 - | cytochrome c oxidase subunit III Tfu_1023 1198832 - 1199263 + | putative response regulator TERM 788 1199302 - 1199332 + F 82 -16.1 -3.14881 | gap 1, overlap 1199326 GACCGTGTCACTCGC CAGCGCCGCCGCGG AACC CCGCGGCGGC-CGG TTCCTCCGGCCCTTC trpD 1199481 - 1200527 + | anthranilate phosphoribosyltransferase TERM 789 1200587 - 1200545 - T 80 -16.1 -2.87132 | GGTTTTCCGGACACA TTCCGGCCGCGGTCCGCCC GCGCG GGGCAGGCCGCGGCCGACC GCCGCTACAGGCCCA Tfu_1025 1200867 - 1200592 - | AsnC family transcriptional regulator Tfu_1026 1201679 - 1200900 - | hypothetical protein Tfu_1027 1203526 - 1201754 - | hypothetical protein TERM 790 1204265 - 1204233 - g 79 -11.9 -3.96148 | CTGCGGGAGCACAAA GCGGAGATCGCGGAG CTG CGCCGCAAGCTCCAC CACGAGCGCCAGCGC TERM 791 1204455 - 1204427 - g 87 -17.3 -3.36671 | opp_overlap 1204426 1204429 AGCCCAAGTGGAGAA CGCCCGCCGGGCG GCC CGCGCGGCGCGCG GCGCCGAAGAAGCCC TERM 792 1205002 - 1204989 - g 75 -4.5 -4.57569 | gap 1, opp_overlap 1204977, overlap 1204990 GTACGGCGGGAAAAA GCG-CG GAC CGTCGC GTCCCCCCTGCTCCT Tfu_1028 1203684 - 1205033 + | hypothetical protein Tfu_1029 1205259 - 1206254 + | putative secreted protein TERM 793 1206376 - 1206413 + F 100 -27.1 -4.57073 | overlap 1206378 CCGCGCACCGGTCGT TGCCTGGGGGTGGCGGC ACGT GCCGCCACCCCCAGGTG TTTTTCCGAGGGCTG TERM 794 1206378 - 1206411 + F 100 -29.7 -3.90048 | overlap 1206376 GCGCACCGGTCGTTG CCTGGGGGTGGCGGC ACGT GCCGCCACCCCCAGG TGTTTTTCCGAGGGC Tfu_1030 1206954 - 1207976 + | NLP/P60 family secreted protein TERM 795 1208043 - 1208002 - T 100 -21.8 -3.01924 | gap 2, opp_overlap 1208004 1208005 1208007, overlap 1208005 1208007 CAGGCCTGGCCAACA TG-A-CAGGGCTCCCGCCGC ATGT GCGGCGGGAGCCCTGGTTCA TTCCGTGCCGGAGAG TERM 796 1208004 - 1208039 + T 100 -26.2 -3.37344 | opp_overlap 1208002 1208005 1208007, overlap 1208005 1208007 GGCCTGGCCAACATG ACAGGGCTCCCGCCGC ATGT GCGGCGGGAGCCCTGG TTCATTCCGTGCCGG TERM 797 1208005 - 1208038 + T 100 -29.7 -2.62192 | opp_overlap 1208002 1208005 1208007, overlap 1208004 1208007 GCCTGGCCAACATGA CAGGGCTCCCGCCGC ATGT GCGGCGGGAGCCCTG GTTCATTCCGTGCCG TERM 798 1208038 - 1208005 - T 100 -29.7 -2.73875 | opp_overlap 1208005 1208004 1208007, overlap 1208002 1208007 GCCTGGCCAACATGA CAGGGCTCCCGCCGC ATGT GCGGCGGGAGCCCTG GTTCATTCCGTGCCG TERM 799 1208036 - 1208007 - T 100 -26.5 -2.9155 | opp_overlap 1208005 1208004 1208007, overlap 1208005 1208002 CTGGCCAACATGACA GGGCTCCCGCCGC ATGT GCGGCGGGAGCCC TGGTTCATTCCGTGC TERM 800 1208007 - 1208036 + T 100 -26.5 -2.8507 | opp_overlap 1208007 1208005 1208002, overlap 1208005 1208004 CTGGCCAACATGACA GGGCTCCCGCCGC ATGT GCGGCGGGAGCCC TGGTTCATTCCGTGC Tfu_1031 1209861 - 1208065 - | long-chain fatty-acid-CoA ligase Tfu_1032 1210088 - 1210561 + | hypothetical protein Tfu_1033 1210691 - 1211638 + | glucokinase TERM 801 1211884 - 1211830 - g 73 -9.9 -3.83026 | gap 3, opp_overlap 1211833 1211835 CTGTGGCAGACCAAA CGACGGTGGCTGGCCCGCCGCTGTGG TCTCCG CCTC-GCGGTGGGCC-GCCGCC-CCG GCGGCCTGGAAATCC Tfu_1034 1211686 - 1212384 + | hypothetical protein Tfu_1035 1213270 - 1212434 - | hypothetical protein TERM 802 1213323 - 1213295 - H 77 -14.5 -2.90075 | TCGGTGTGAAGGATA CGCAGCGCTCCCG GAG CGGGAGCACCGCC AGTGCTCCGGGAACC TERM 803 1213627 - 1213601 - H 73 -9.5 -3.84514 | gap 1, opp_overlap 1213601 ACTGGAATTACGAAA CTAGCCGAGCGC CGCG GCACTCGG-TAG TCCTCTTCGTCCGTG TERM 804 1213816 - 1213867 + G 72 -6.5 -4.25104 | gap 1 GTGCTCGCGGTGCTG TGGCAGCCGCGTGCCTACGGA-GT GGAGA ACGTCCCTCGCCACGGGCCTGCCA TTTTGGTGGGCAACC TERM 805 1214535 - 1214514 - g 72 -14.4 -3.18274 | CCGACGGGAAGCGAA GCGGCGGG AACGCG CCCGCCGC AAGGCGGAACGCAAG Tfu_1036 1213765 - 1214583 + | phospholipid/glycerol acyltransferase TERM 806 1214607 - 1214564 - f 81 -4.6 -4.90079 | gap 2, opp_overlap 1214570 1214595 1214598 AGCGGAAGAAGAAAA CGGAGTCCGCACAGCCGTGA TTCCGC TCACG-CTGC-CGGGCTGCG CCGGACAGAAACTAC TERM 807 1214783 - 1214824 + F 86 -10.8 -4.2828 | gap 3, overlap 1214787 CGGTCCTGCCGTGTG CGTTCCGCGCCC-G-CGGGGC ATC GCCCCGGCCGGGAGCGGT-CG TTTTCGTGACTCCCG TERM 808 1214787 - 1214821 + F 82 -15.7 -3.14218 | gap 2, overlap 1214783 CCTGCCGTGTGCGTT CCGCGCCC-G-CGGGGC ATC GCCCCGGCCGGGAGCGG TCGTTTTCGTGACTC Tfu_1037 1214880 - 1215905 + | pyrophosphate-dependent phosphofructokinase TERM 809 1215922 - 1215956 + F 100 -21.5 -2.62983 | opp_overlap 1215943 TTCCCGTAGGATTTC TCGCGGCTCCCAGCG GAGAA TGCTGGGAGCCGCGG TCGTGTCCGCGTGAA TERM 810 1216016 - 1215982 - f 76 -2 -4.90381 | opp_overlap 1215982 1215983, overlap 1215983 1216014 GTGAAGAGAACAAAA CGCTTGCGTCCCTG GTTGATA CTGGGAGGTAAGCA GTTTTCTCTGCACTG Tfu_1038 1216067 - 1217335 + | thiamine biosynthesis protein Tfu_1039 1218431 - 1217385 - | 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase TERM 811 1218183 - 1218204 + g 72 -8.7 -4.09685 | overlap 1218192 TACCCCAGCAACCTG CACGACCGA CCGC TCAGTCGTG TTTTCCCGGCTGACC TERM 812 1218525 - 1218502 - H 100 -16 -5.02287 | CAGAAAAACAGAAAA GCCCTGGACC GTTC GGCCCAGGGC TTCCAAGTCGTCCGT Tfu_1040 1218724 - 1219326 + | hypothetical protein Tfu_1041 1221355 - 1219337 - | tyrosine protein kinase:Serine/threonine protein kinase:PASTA TERM 813 1221373 - 1221336 - G 100 -31.5 -3.79747 | opp_overlap 1221340, overlap 1221340 GCACGCAGCAGTAAA GAAACCCGGGGCGGGAC CACG GTCCCGCCCCGGGTTTC AGCCCTCGCGCGGCG TERM 814 1221369 - 1221340 - G 100 -26.5 -4.51743 | opp_overlap 1221340, overlap 1221336 GCAGCAGTAAAGAAA CCCGGGGCGGGAC CACG GTCCCGCCCCGGG TTTCAGCCCTCGCGC TERM 815 1221340 - 1221369 + g 100 -26.5 -3.55444 | opp_overlap 1221340 1221336 GCAGCAGTAAAGAAA CCCGGGGCGGGAC CACG GTCCCGCCCCGGG TTTCAGCCCTCGCGC thiG 1222172 - 1221372 - | thiazole synthase Tfu_1043 1222374 - 1222174 - | ThiS, thiamine-biosynthesis Tfu_1044 1223546 - 1222371 - | thiamine biosynthesis oxidoreductase ThiO TERM 816 1223629 - 1223644 + H 75 -6.8 -4.37711 | gap 1, overlap 1223629 1223640 CTCAGCCGGGTTCCG CCC-CGG CTC CCGCGGG TTTTCGCTTTCGTCC Tfu_1045 1223753 - 1224130 + | hypothetical protein thiE 1224203 - 1224859 + | thiamine-phosphate pyrophosphorylase TERM 817 1224918 - 1224893 - T 75 -12.5 -3.53012 | opp_overlap 1224908 1224909 CGGGCGGGCCGGAAA GGGCGCTCAGC GGGG GCCGAGCGCGC TACCGGAGCCGCTGA TERM 818 1224908 - 1224962 + T 71 -10 -3.62046 | gap 3, opp_overlap 1224893 1224937, overlap 1224909 GGGCGCTCAGCGGGG GCCGAGCGCGC--TACCG-GAGCCGCT GAAG AGCGGCGCGTGGGACAGCGCGCTCGGA TTCTTCCGCAGGTAG Tfu_1047 1225834 - 1224899 - | hypothetical protein Tfu_1048 1226001 - 1226507 + | hypothetical protein Tfu_1050 1227997 - 1227059 - | 5,10-methylenetetrahydrofolate reductase Tfu_1049 1226533 - 1227141 + | hypothetical protein Tfu_1051 1228083 - 1229153 + | putative polyprenyl synthase / dimethylallyltranstransferase TERM 819 1229499 - 1229454 - T 100 -35.1 -3.6682 | opp_overlap 1229454 1229464 GGGTATGCAGGCAAA GCATGGTAAAGGCGGCTGGCT GCAC AGCCAGCCGCCTTTACCATGC TTTGCGGCGTTGTCC TERM 820 1229454 - 1229499 + T 100 -35.1 -3.58533 | opp_overlap 1229454, overlap 1229464 GGGTATGCAGGCAAA GCATGGTAAAGGCGGCTGGCT GCAC AGCCAGCCGCCTTTACCATGC TTTGCGGCGTTGTCC TERM 821 1229464 - 1229489 + T 100 -20.5 -3.65353 | opp_overlap 1229454, overlap 1229454 GCAAAGCATGGTAAA GGCGGCTGGCT GCAC AGCCAGCCGCC TTTACCATGCTTTGC Tfu_1052 1230054 - 1229557 - | helix-hairpin-helix DNA-binding motif-containing protein Tfu_1053 1230573 - 1231196 + | pyrimidine regulatory protein PyrR pyrB 1231196 - 1232137 + | aspartate carbamoyltransferase catalytic subunit pyrC 1232134 - 1233429 + | dihydroorotase TERM 822 1234406 - 1234382 - g 78 -17.1 -2.70932 | CCGCGGCGCCAACCA CCCGGTCCGCG AGA CCCGGACCGGG CGCGTCTACATCACC Tfu_1056 1233426 - 1234676 + | carbamoyl-phosphate synthase small subunit Tfu_1057 1234769 - 1238080 + | carbamoyl-phosphate synthase large subunit Tfu_1058 1238263 - 1239153 + | dihydroorotate oxidase B, electron transfer subunit Tfu_1059 1239160 - 1240152 + | dihydroorotate oxidase B, catalytic subunit TERM 823 1240215 - 1240234 + F 74 -2.7 -4.8048 | opp_overlap 1240202, overlap 1240214 AACGCGCGGTAACGT CCTGCGC TGCTGC GCGCGAG TTTTTCCTCTGCCGC Tfu_1060 1240459 - 1241160 + | orotidine-5'-phosphate decarboxylase TERM 824 1241465 - 1241452 - f 79 -5.9 -4.6709 | opp_overlap 1241463 GAAAACGAGAGAAAA CCGAG GTGA CCCGG CGTGGCCCTTCCTCC Tfu_1061 1241467 - 1241784 + | hypothetical protein TERM 825 1241821 - 1241877 + F 83 -17.9 -2.62396 | overlap 1241795 CCACTGTGCGCGCCG CTACTGTGTGGACCGGCTCGTCGCTGC ACG GCGGTGACGAGCCGGTCCCCGTTGAAC TGGTATAAAAAGATC TERM 826 1241922 - 1241889 - f 86 -6.6 -4.8543 | overlap 1241891 1241892 GAACTGGTATAAAAA GATCCACCGCGGCG CGAAGC CGCGGCGACGAACC ACCGTCCATCCCGTG TERM 827 1241917 - 1241891 - f 75 -9.3 -4.04397 | overlap 1241889 1241892 ACTGGTATAAAAAGA TCCACCGCGGC GCGAA GCCGCGGCGAC GAACCACCGTCCATC TERM 828 1241916 - 1241892 - f 71 -12.8 -3.01915 | overlap 1241891 1241889 CTGGTATAAAAAGAT CCACCGCGGC GCGAA GCCGCGGCGA CGAACCACCGTCCAT Tfu_1062 1241967 - 1242557 + | guanylate kinase Tfu_1063 1242703 - 1242969 + | DNA-directed RNA polymerase subunit omega TERM 829 1243691 - 1243726 + G 77 -14.6 -3.14132 | gap 1 CACGTGGTGGTCTCC GCGGG-CGGGACGCGGG AGG CCCTCGACCCGGTCCGC TTCCTGGGGAACCGG Tfu_1064 1243103 - 1244341 + | bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase Tfu_1065 1244573 - 1245766 + | S-adenosylmethionine synthetase Tfu_1066 1247038 - 1245833 - | hypothetical protein Tfu_1067 1247722 - 1247258 - | hypothetical protein Tfu_1068 1248989 - 1247799 - | glutaryl-CoA dehydrogenase Tfu_1069 1250299 - 1249064 - | CaiB/BaiF family protein Tfu_1070 1250664 - 1250296 - | hypothetical protein Tfu_1071 1251053 - 1251772 + | hypothetical protein Tfu_1072 1252574 - 1251780 - | hypothetical protein Tfu_1073 1254676 - 1252643 - | primosome assembly protein PriA TERM 830 1252691 - 1252720 + g 73 -12.7 -3.53012 | overlap 1252692 CACCGATTTTTCTTC CCGGCGGGCGCTG CGGG CCGCGCTCGCCGC TTTGAGGGCCGCGGA TERM 831 1252692 - 1252719 + g 74 -16.2 -2.71712 | overlap 1252691 ACCGATTTTTCTTCC CGGCGGGCGCTG CGGG CCGCGCTCGCCG CTTTGAGGGCCGCGG TERM 832 1253656 - 1253685 + g 74 -12 -3.55761 | overlap 1253682 CGGCGACGATCGGGT GCGCCCACCCCG ATTCGA CGAGGAGGGCGC TTTCCGCGGTCCGTG TERM 833 1254766 - 1254730 - R 100 -18.1 -5.626 | overlap 1254731 GAGGTCACAAAAAAA GGGGTGGCTTAGGCC CCAGCAC GGCCTAAGCCACCCA GTGCACTGCCAGGAG TERM 834 1254765 - 1254731 - R 100 -21.6 -3.96475 | overlap 1254730 AGGTCACAAAAAAAG GGGTGGCTTAGGCC CCAGCAC GGCCTAAGCCACCC AGTGCACTGCCAGGA Tfu_1074 1256110 - 1254785 - | endoglucanase TERM 835 1257595 - 1257542 - g 95 -15.1 -4.2528 | gap 1, overlap 1257546 CCGCAAGGCAAGAAA GCCATGCCCGCCGCCGA-CTGGGCCC GCG GTGCCCGGATCGGCGACGGGGAACGC TTCGGAGACGACTGA TERM 836 1257591 - 1257546 - g 78 -17.5 -2.76941 | gap 1, overlap 1257542 AAGGCAAGAAAGCCA TGCCCGCCGCCGA-CTGGGCCC GCG GTGCCCGGATCGGCGACGGGGA ACGCTTCGGAGACGA fmt 1256678 - 1257610 + | methionyl-tRNA formyltransferase Tfu_1076 1257699 - 1259129 + | putative RNA-binding Sun protein TERM 837 1259803 - 1259782 - g 72 -4.3 -4.59773 | gap 1, overlap 1259784 GTCTACGGCGAAAAA GACCCGGCGG CCG CCGTCGAG-C ACCTGCGCGCCCTCG Tfu_1077 1259173 - 1259841 + | ribulose-phosphate 3-epimerase Tfu_1078 1260296 - 1260913 + | riboflavin synthase subunit alpha Tfu_1079 1260910 - 1261572 + | nicotinamide mononucleotide transporter PnuC TERM 838 1261729 - 1261672 - g 77 -17.5 -2.64274 | opp_overlap 1261680 1261721, overlap 1261651 1261721 AGGCGCTCAAAGCCA TCGCCGCGGGACGCCCGGTCGTCGTCG TGGA CGACGCCGACCGGGAGAACGAGGGCGA CCTGGTCTTCGCCGC Tfu_1080 1261614 - 1262846 + | bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein Tfu_1081 1262868 - 1263380 + | 6,7-dimethyl-8-ribityllumazine synthase Tfu_1082 1263441 - 1263911 + | hypothetical protein Tfu_1083 1265102 - 1264185 - | putative aldose-1-epimerase Tfu_1084 1267768 - 1265267 - | serine/threonine protein kinase TERM 839 1267684 - 1267722 + g 73 -8.1 -4.11216 | gap 1, overlap 1267685 GGGTGACACCCGGCT CCGAGGGGGT-GAGCTGG ACGG TCGGCTCGACCGCCTCGA TTTTGCGGGTGGGCG TERM 840 1267794 - 1267811 + r 77 -12.7 -3.31461 | opp_overlap 1267790 CGCTCCAGGAACGGT GGGCCGA ACTG TCGGCCC TTCTCAGGGTAGGTG Tfu_1085 1268250 - 1267924 - | hypothetical protein TERM 841 1268313 - 1268279 - R 100 -20.1 -3.33696 | gap 1 CGTGTGCGGAATGAA TG-CGGGGCCGCCGGT GTGC ACCGGCGGCCCCATCA CGATAGCGAGAGCGC Tfu_1086 1268897 - 1268352 - | hypothetical protein TERM 842 1268687 - 1268697 + g 70 -8.2 -3.83155 | overlap 1268668 AGCGGACGTGCTCGT CGCG CTG CGCG TTGTTGGTGTTGATG Tfu_1087 1269000 - 1269500 + | MarR family transcriptional regulator TERM 843 1269797 - 1269783 - g 72 -3.4 -4.56597 | opp_overlap 1269793, overlap 1269784 1269792 CGCGTCCGCGAAAAA CGCAGC GAA GTCGCG ATGCCCGTGCTCATC TERM 844 1269968 - 1269939 - g 82 -11.3 -4.23674 | overlap 1269933 GCCTACGAAGACAAA GCCGACGCCGTCG TCAT CGACGTCGCAGGC CCCGTCACCTACGCG Tfu_1088 1269570 - 1270274 + | hypothetical protein Tfu_1089 1270356 - 1271162 + | hypothetical protein Tfu_1090 1271245 - 1272426 + | chorismate synthase Tfu_1091 1272460 - 1272978 + | shikimate kinase aroB 1273188 - 1274294 + | 3-dehydroquinate synthase Tfu_1093 1274448 - 1275011 + | elongation factor P nusB 1275011 - 1275439 + | transcription antitermination protein NusB TERM 845 1275648 - 1275601 - g 78 -16.2 -3.02511 | gap 1 TCGAGCCGTTGAACA TCGTCGATGCGGGCGGCGGCACC GGG GGTGCCGCCGTGCCCCTCG-CGA GACTCGGCCACCGGG Tfu_1095 1275480 - 1276238 + | putative methyltransferase Tfu_1096 1276310 - 1277584 + | DNA-directed DNA polymerase Tfu_1097 1277853 - 1278230 + | hypothetical protein Tfu_1098 1280636 - 1278270 - | transglutaminase-like TERM 846 1278829 - 1278844 + g 75 -8.2 -4.15044 | overlap 1278830 TCTGCCGCGGAAGGC TCCGCG GGCT CGCGGG TTTCTTCCGGGGCGG Tfu_1099 1281811 - 1280633 - | hypothetical protein Tfu_1100 1282866 - 1281880 - | putative regulatory protein TERM 847 1283031 - 1283045 + H 72 -3.5 -4.59207 | CCACCTTCATCCACC CCGTA TCACC TGCGG TTTTGTCGTGTTTCT Tfu_1101 1283165 - 1283596 + | cell division protein MraZ TERM 848 1284443 - 1284427 - g 70 -9.4 -3.9122 | CAGCGCGCCAAAGAA CCGGTG CGCAC CACCGG GGTGCTCGCGGACCT Tfu_1102 1283851 - 1284843 + | methyltransferase Tfu_1103 1284918 - 1285337 + | hypothetical protein TERM 849 1285479 - 1285430 - g 74 -12.1 -3.57462 | gap 2, overlap 1285433 GACCGCAGTCCCAAA GATCCGCG-CCG-GCCGGCAGCG GCAGCA CGCAGCCGGCACGGGCACCGACC GCGTTCCGCGCAGCC Tfu_1104 1285400 - 1287361 + | peptidoglycan glycosyltransferase Tfu_1105 1287604 - 1289208 + | UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase TERM 850 1289458 - 1289471 + F 76 -9.5 -4.08216 | overlap 1289438 1289445 CCGTGGCGTCCGCAT GCCGC TTTC GCGGC TTTTGGGCAGCATCC Tfu_1106 1289563 - 1290975 + | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase mraY 1290972 - 1292027 + | phospho-N-acetylmuramoyl-pentapeptide-transferase TERM 851 1292175 - 1292126 - g 70 -12.7 -3.35775 | overlap 1292124 AGCACTGCTGAAACA CGGGGCGCACGTCACCGTCGTGG AAGG CCGCGACGACGACGTGAACCGGG AACGCGCCCGCACCC murD 1292046 - 1293443 + | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase Tfu_1109 1293643 - 1295019 + | cell division protein FtsW murG 1295016 - 1296155 + | N-acetylglucosaminyl transferase Tfu_1111 1296152 - 1297570 + | UDP-N-acetylmuramate--L-alanine ligase Tfu_1112 1297637 - 1298371 + | cell division protein FtsQ Tfu_1113 1298754 - 1300163 + | cell division protein FtsZ Tfu_1114 1300238 - 1300963 + | hypothetical protein Tfu_1115 1300960 - 1301682 + | hypothetical protein Tfu_1116 1301692 - 1302324 + | hypothetical protein Tfu_1117 1302364 - 1302669 + | hypothetical protein Tfu_1118 1302800 - 1303642 + | hypothetical protein Tfu_1119 1303707 - 1305098 + | hypothetical protein TERM 852 1305238 - 1305180 - T 84 -13.1 -3.76224 | gap 2, opp_overlap 1305186 1305188, overlap 1305194 GTCGGATTGAGGAAA CGACTCCACGACAACGGGGCCGTGAACCC GAA AGGTCCACGGCCCCGT-G-CGACGTGTCT TAGGCCTTCCGCAGC TERM 853 1305186 - 1305235 + T 89 -18.6 -3.06261 | gap 1, opp_overlap 1305180 1305194, overlap 1305188 TTGAGGAAACGACTC CACGAC-AACGGGGCCGTGAACC CGAAA GGTCCACGGCCCCGTGCGACGTG TCTTAGGCCTTCCGC TERM 854 1305188 - 1305233 + T 82 -15.4 -3.08867 | gap 1, opp_overlap 1305180 1305194, overlap 1305186 GAGGAAACGACTCCA CGAC-AACGGGGCCGTGAACC CGAAA GGTCCACGGCCCCGTGCGACG TGTCTTAGGCCTTCC TERM 855 1305226 - 1305194 - T 100 -23.5 -3.4178 | opp_overlap 1305188 1305186, overlap 1305180 ACGACTCCACGACAA CGGGGCCGTGAACCC GAA AGGTCCACGGCCCCG TGCGACGTGTCTTAG ileS 1308420 - 1305238 - | isoleucyl-tRNA synthetase TERM 856 1306738 - 1306762 + g 70 -15.1 -2.73364 | overlap 1306744 GCAGATGTACTGGGC GGGGAAGTTCG CTT CGAACTTCTCC TGGTTGCGGTGCGGG Tfu_1121 1308796 - 1309062 + | hypothetical protein Tfu_1122 1309313 - 1309861 + | signal peptidase II Tfu_1123 1309858 - 1310787 + | ribosomal large subunit pseudouridine synthase D Tfu_1124 1315545 - 1310860 - | helicase, C-terminal:DEAD/DEAH box helicase, N-terminal TERM 857 1312281 - 1312246 - G 71 -9.7 -3.71848 | gap 1 CCCGGGCAGGAAGAA CGCGCCGACCGTGG CCCAGGCCT CCCCGGT-GGCGCG GTGCCAGTGCCGGAA Tfu_1125 1318949 - 1315542 - | hypothetical protein TERM 858 1318776 - 1318823 + g 77 -11.8 -3.85698 | overlap 1318778 GCGTCCCCGGTCGAG GGCCTGGGTGAGGACGCGGCCG AGCG CGACCGCGGCCTGGTCCAGGTG TTTCTGGGGCAGCAC TERM 859 1318778 - 1318821 + g 84 -16.6 -3.51934 | overlap 1318776 GTCCCCGGTCGAGGG CCTGGGTGAGGACGCGGCCG AGCG CGACCGCGGCCTGGTCCAGG TGTTTCTGGGGCAGC TERM 860 1319183 - 1319147 - R 100 -28.8 -3.71848 | opp_overlap 1319150 1319172 GTCGCGGAGGAAGAA CACCGCCGGGCCGGGA GGGCG TCCCGGCCCGGCGGCG CACTCTCCGCTCCCC Tfu_1126 1319539 - 1319207 - | hypothetical protein Tfu_1127 1320305 - 1319610 - | hypothetical protein TERM 861 1320266 - 1320317 + g 81 -7 -4.54047 | gap 1, opp_overlap 1320315 AGGTGAGTGCGGGTC GGGCGCTGCGAGGGGCGGGCTGGCC GGG GGACAGCCT-CACCGCGAAGAACCC TTTTCTATAGGGTCC Tfu_1128 1320532 - 1320840 + | hypothetical protein Tfu_1129 1320866 - 1321540 + | hypothetical protein Tfu_1130 1321966 - 1322880 + | hypothetical protein Tfu_1131 1323232 - 1324083 + | hypothetical protein Tfu_1132 1324566 - 1324186 - | putative mini-circle protein TERM 862 1324453 - 1324506 + g 88 -12 -4.26351 | gap 3, overlap 1324455 TTCCCGTCGTGGACC TGTCTCACCGCGGTA-AGCCC-ACATG ACC CA-GTCGTGCTCTACCGCGGTGAGATG TTTGTTGACTTCCTC TERM 863 1324455 - 1324504 + g 88 -14.6 -3.72494 | gap 3, overlap 1324453 CCCGTCGTGGACCTG TCTCACCGCGGTA-AGCCC-ACATG ACC CA-GTCGTGCTCTACCGCGGTGAGA TGTTTGTTGACTTCC Tfu_1133 1325756 - 1324563 - | transposase, IS605 OrfB Tfu_1134 1326155 - 1325757 - | transposase-related protein TERM 864 1326364 - 1326353 - H 79 -7.2 -4.49937 | overlap 1326354 GGAAGAAGAGGAAAA CGCG GTCA CGCG CTGGAAACCGCCGGC Tfu_1135 1326643 - 1327632 + | hypothetical protein Tfu_1136 1328121 - 1328327 + | hypothetical protein Tfu_1137 1328828 - 1328514 - | hypothetical protein Tfu_1138 1329556 - 1328825 - | hypothetical protein Tfu_1139 1329866 - 1330528 + | hypothetical protein Tfu_1140 1331224 - 1332027 + | hypothetical protein Tfu_1141 1332165 - 1333079 + | tyrosine protein kinase:Serine/threonine protein kinase Tfu_1142 1334776 - 1333040 - | ABC-type multidrug transport system ATPase and permease components Tfu_1143 1335200 - 1334784 - | hypothetical protein Tfu_1144 1335469 - 1335197 - | hypothetical protein Tfu_1145 1337282 - 1335450 - | asparagine synthase (glutamine-hydrolysing) TERM 865 1337611 - 1337600 - H 87 -5.8 -5.04325 | TTTAAAGGAGAAAAA GACC GCGT GGTC TGTCGGATAACGTCC TERM 866 1338000 - 1338023 + H 95 -7.4 -5.0916 | gap 1 AACAGGGGATGCGGG CCGCTGTGGCC GGG GGC-ACACCGG TTTTTCTGTTGAAGA TERM 867 1338412 - 1338437 + G 70 -14.7 -2.71364 | gap 1 TGGCCACCCTGCTCG GCCTCGCCGCGG GGA CCGTGGCG-GGC TCCTTCACCGCCTGG Tfu_1146 1338129 - 1338701 + | hypothetical protein Tfu_1147 1339465 - 1338743 - | PadR family transcriptional regulator Tfu_1148 1340720 - 1339584 - | hypothetical protein Tfu_1149 1341509 - 1340832 - | peptidase S16, lon N-terminal hisD 1341730 - 1343046 + | histidinol dehydrogenase TERM 868 1343597 - 1343561 - g 78 -14.4 -3.61715 | gap 1 CACCTCGCCCAACAA CCCCACCGGGACC-GCG CTCC CGCTGGCCACGGTGGAG GCGATCGCTGCAGCC Tfu_1151 1343043 - 1344146 + | histidinol-phosphate aminotransferase Tfu_1152 1344219 - 1344812 + | imidazoleglycerol-phosphate dehydratase Tfu_1153 1344809 - 1344970 + | hypothetical protein hisH 1344999 - 1345634 + | imidazole glycerol phosphate synthase subunit HisH Tfu_1155 1345673 - 1346410 + | 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase Tfu_1156 1346407 - 1347177 + | imidazole glycerol phosphate synthase subunit hisF TERM 869 1347736 - 1347771 + G 78 -16.8 -3.04263 | overlap 1347739 1347741 TCATGGAGCAGCGCA CCACCGTGGCCGCGGT CGCC ACCGCGTCCGCGGTCG TGTTCGCGGTCGGCT TERM 870 1347739 - 1347768 + G 78 -17.1 -2.74523 | overlap 1347736 1347741 TGGAGCAGCGCACCA CCGTGGCCGCGGT CGCC ACCGCGTCCGCGG TCGTGTTCGCGGTCG TERM 871 1348719 - 1348693 - g 79 -7.2 -4.39696 | overlap 1348696 CCGGAAACGAAGAAA CACCACGCATCA CCG TGCTGCGCGACG TCACCCTGGACCTGG Tfu_1157 1347519 - 1349435 + | ABC-type multidrug transport system ATPase and permease components Tfu_1158 1349432 - 1351276 + | ABC-type multidrug transport system ATPase and permease components hisI 1352408 - 1352758 + | phosphoribosyl-AMP cyclohydrolase Tfu_1160 1352755 - 1353366 + | hypothetical protein TERM 872 1353581 - 1353549 - g 78 -9.8 -4.24342 | overlap 1353545 GGTGTGATGAAGAAA GCG-GGACTGGGTCGC AAG GCGCCCC-GCCCTCGC CCGATGACCCGCGAA Tfu_1161 1353366 - 1353653 + | hypothetical protein Tfu_1162 1353829 - 1354239 + | hypothetical protein TERM 873 1354263 - 1354316 + G 79 -15.4 -3.31792 | gap 3, opp_overlap 1354274, overlap 1354264 TGGTCGAGCCGTCGA TACC-AGAGAGA-CGGCGCCGCCTGCA TCC TGC-GGCGGCGCCGCTCGCTCTCGGCG TTCTCGGCCTCCTCG TERM 874 1354264 - 1354315 + G 73 -16.7 -2.58861 | gap 3, opp_overlap 1354274, overlap 1354263 GGTCGAGCCGTCGAT ACC-AGAGAGA-CGGCGCCGCCTGCA TCC TGC-GGCGGCGCCGCTCGCTCTCGGC GTTCTCGGCCTCCTC TERM 875 1354303 - 1354274 - g 91 -21.5 -3.04269 | gap 1, opp_overlap 1354264 1354263 TCGATACCAGAGAGA CGGCGCCGCCTGCA TCC TGC-GGCGGCGCCG CTCGCTCTCGGCGTT Tfu_1163 1354247 - 1354711 + | hypothetical protein TERM 876 1355156 - 1355194 + G 79 -11.7 -4.07687 | gap 1 CGACTACGCCGCGGG CGGCGCCTGCATGATCAG CGTC CTGACCGAGCAG-CGCCG TTTTGCCGGCAGCCT trpC 1354914 - 1355720 + | indole-3-glycerol-phosphate synthase TERM 877 1355810 - 1355840 + F 90 -16.1 -3.54741 | CGGTGGTTGGCGGAG CGTCCCTGACGCG CTACC CGCGGCGGGGACG TTTCCCGGCATACTG Tfu_1165 1356074 - 1357312 + | tryptophan synthase subunit beta trpA 1357309 - 1358121 + | tryptophan synthase, alpha chain TERM 878 1358148 - 1358171 + F 90 -19.6 -2.65815 | GATTTCTCCGCCACA GCCCTCCGGC ACAT GCCGGAGGGC TAATGTGCGTGTGCA Tfu_1167 1358320 - 1358895 + | hypothetical protein Tfu_1168 1359007 - 1360020 + | hypothetical protein Tfu_1169 1360036 - 1361106 + | prolipoprotein diacylglyceryl transferase TERM 879 1361427 - 1361380 - g 74 -12.4 -3.62591 | overlap 1361381 CGCAGAAGCGCGAAA GCCGGCCGCGGCGGAGCCGCGG AACG CGGCAGGACCGCCGCGGACAGT CCGCGCCGCGCCAGC TERM 880 1361426 - 1361381 - g 74 -15.9 -2.77233 | overlap 1361380 GCAGAAGCGCGAAAG CCGGCCGCGGCGGAGCCGCGG AACG CGGCAGGACCGCCGCGGACAG TCCGCGCCGCGCCAG Tfu_1170 1361155 - 1362303 + | hypothetical protein Tfu_1171 1362386 - 1363378 + | hypothetical protein Tfu_1172 1363390 - 1365048 + | methyltransferase TERM 881 1369482 - 1369438 - g 78 -14.3 -3.54741 | gap 1 GACTACGTCGGCAAA GGC-CTGTCCGGGGGACGGA TCATCG TCCGCCCCGCGGACACCGCC CCGTTCGCCGCTGAA Tfu_1173 1365439 - 1370001 + | glutamate synthase (NADH) large subunit TERM 882 1370652 - 1370619 - g 84 -7.5 -4.70879 | overlap 1370621 TTCAAACTGGAAAAA CG-GCACCTGGAGCG GCGGCT CGC-CCAGATGCGCG CCGAAGGCACCGAGT Tfu_1174 1370037 - 1371494 + | glutamate synthase (NADH) small subunit Tfu_1175 1371605 - 1371991 + | hypothetical protein Tfu_1176 1372000 - 1372455 + | hypothetical protein TERM 883 1372448 - 1372435 - f 71 -4.5 -4.56597 | CGCCTGCCCGAAAAA TCCGA TTTC CCGGA GGTTTGAAGTCGCGT Tfu_1177 1372484 - 1373401 + | hypothetical protein TERM 884 1373735 - 1373770 + G 78 -6 -4.56597 | overlap 1373747 AACCCCGACTACCTG CGCACCCATGAGCGCG CGGT CGCGTTCGTCCGTGAG TTTTTCGACACAGGG Tfu_1178 1373465 - 1374034 + | peptidase C56, PfpI TERM 885 1374448 - 1374478 + G 75 -9 -4.19746 | gap 1, overlap 1374449 1374468 GGTGATGTCCGTCCT GGCGACCG-CGTC CTCATC GACGACGGTCGCG TTGTTTTGGAATGCG Tfu_1179 1374085 - 1375515 + | pyruvate kinase Tfu_1180 1376545 - 1375610 - | hypothetical protein TERM 886 1377089 - 1377056 - H 95 -16.1 -4.19735 | opp_overlap 1377067, overlap 1377063 GGCCGGAAAACCAAA CGAAAAAGCCACCTG GTTT CAGGTGGCTTCCCCG CAGATCCGGAGCGGG TERM 887 1377082 - 1377063 - H 100 -13.6 -5.05577 | opp_overlap 1377067, overlap 1377056 AAACCAAACGAAAAA GCCACCTG GTTT CAGGTGGC TTCCCCGCAGATCCG Tfu_1181 1377300 - 1377923 + | response regulator receiver TERM 888 1377961 - 1377985 + F 100 -17.1 -4.35604 | CCCCGTAAAGTTCCC GGCCGCCCACC CTC GGTGGACGGCC TTTCTTCTGCCTTGA TERM 889 1378148 - 1378172 + F 76 -9.3 -4.11216 | gap 1 AGCAGCTAAGTATCC GGCCCGTGGG TCAAGC CCCA-GGGCC TTTTCAAGATGCGCA Tfu_1182 1378201 - 1379646 + | branched-chain amino acid ABC-type transport system permease components Tfu_1183 1379658 - 1380644 + | branched-chain amino acid transport system permease protein Tfu_1184 1380634 - 1381515 + | branched-chain amino acid transport system ATP-binding protein Tfu_1185 1381508 - 1382350 + | ABC-type branched-chain amino acid transport systems ATPase component TERM 890 1382367 - 1382395 + T 100 -23.3 -3.44622 | opp_overlap 1382367 CCTGCCCGTCGCAAA GGGGGTTCTGGAC CAA GTCCAGAACCCCC TTCCTTATACGGGTA TERM 891 1382395 - 1382367 - T 100 -23.3 -3.53012 | opp_overlap 1382367 CCTGCCCGTCGCAAA GGGGGTTCTGGAC CAA GTCCAGAACCCCC TTCCTTATACGGGTA TERM 892 1382475 - 1382438 - T 100 -22.7 -3.54424 | opp_overlap 1382447 1382463 1382472, overlap 1382440 CCGGAGGCGCGCAAA GAGCGGGGGCCGGAACC TGGT GGTTCCGGCCCCCGCGG CGCGAGGAGGGCTGC TERM 893 1382473 - 1382440 - T 100 -29.7 -3.35046 | opp_overlap 1382447 1382463 1382472, overlap 1382438 GGAGGCGCGCAAAGA GCGGGGGCCGGAACC TGGT GGTTCCGGCCCCCGC GGCGCGAGGAGGGCT Tfu_1186 1383737 - 1382490 - | branched-chain amino acid transport system substrate-binding protein TERM 894 1384021 - 1384006 - R 74 -2.5 -4.82901 | overlap 1384007 TTCGGCGCACAAAAA CTCCG GGAAAA CGGAA GCGGAAATAGGTTTT Tfu_1187 1384902 - 1384123 - | hypothetical protein Tfu_1188 1385367 - 1384942 - | phenylacetic acid degradation-related protein TERM 895 1385071 - 1385110 + g 71 -11.4 -3.54408 | gap 1, overlap 1385068 GGGCACCGCCACTCC CGTGACCCAGC-CCGAGGT GAC ACTGCGGTGGTGGGTCGCG TTGATTTCGATACCC Tfu_1189 1385427 - 1388216 + | DNA polymerase I Tfu_1190 1388318 - 1388746 + | hypothetical protein TERM 896 1389020 - 1389074 + F 81 -12 -3.83998 | opp_overlap 1389033 AGACCGACCGGTCGA CGTGCGGATTAGAGGACGGCCACATC TTT GGTGTGGTGGACCTCCCATCCGGGCG TTTCCTGTCGGATCC rpsA 1389156 - 1390613 + | 30S ribosomal protein S1 TERM 897 1390632 - 1390659 + F 100 -17.7 -4.8048 | GCTCCATAGGCTGAC GGGGGTCGCCC ACGATC GGGCGGCCCCC TTTTTCGTGTGCCGC Tfu_1192 1390668 - 1391300 + | dephospho-CoA kinase Tfu_1193 1392714 - 1391428 - | GTPase TERM 898 1391884 - 1391898 + g 86 -5.7 -4.90266 | overlap 1391895 GGTAAGAGCCTTCTT CTCCT GAGCG AGGAG TTTTTCCTTCCTGCG TERM 899 1391919 - 1391941 + g 74 -15.6 -3.09492 | opp_overlap 1391919 CCTTCCTGCGAAGCA GCAGCTCGCG CTC TGCGAGCTGC TGTTCACGTTCCCGC TERM 900 1391941 - 1391919 - G 70 -14.9 -2.70932 | opp_overlap 1391919 CCTTCCTGCGAAGCA GCAGCTCGC GCTCT GCGAGCTGC TGTTCACGTTCCCGC TERM 901 1392317 - 1392285 - G 86 -12.7 -4.13767 | overlap 1392286 GGTTGTAGGCGAAAA CGATCTGCTCCGGGG CTA CCCCGCAGGAGATCA GCAGATCCACGGTGC TERM 902 1392821 - 1392837 + r 91 -6.5 -5.06414 | TATGTCCGGCTTCTG GATGGCG AAT CGCTGTC TTTTTATTGACGCGC Tfu_1194 1393340 - 1392798 - | hypothetical protein Tfu_1195 1393769 - 1396111 + | putative regulator TERM 903 1396240 - 1396262 + F 75 -9.2 -4.03234 | opp_overlap 1396228 1396259, overlap 1396228 AAAGGCGAGTTGTCT CCTGTTTTTC GGG GAAAAACCGG TTTCTCTGCGGGAAA TERM 904 1396282 - 1396259 - f 81 -7.4 -4.56597 | opp_overlap 1396240 TTTTTCGGGGAAAAA CCGGTTTCTC TGCG GGAAAACCGG GAAGAGTGCGTTTTG Tfu_1196 1397067 - 1399172 + | excinuclease ABC subunit B Tfu_1197 1399264 - 1399755 + | hypothetical protein Tfu_1198 1400043 - 1401038 + | hypothetical protein TERM 905 1401662 - 1401627 - g 77 -11.8 -3.89302 | opp_overlap 1401623 ACCAACGAGATCAAA GCCCGCATCCTCGCCA TGGA CAGCGAGGACGTGGAC GTGGTCATTACCGAG Tfu_1199 1401156 - 1402901 + | CTP synthetase TERM 906 1403317 - 1403343 + G 70 -8.6 -3.87815 | opp_overlap 1403338 1403339 CTCGCCCGTGACCTC GTCCGCGTCCCC GAG GAGGAAGTGGAC TTTGTCCGCATCCAC Tfu_1200 1402894 - 1403517 + | hypothetical protein TERM 907 1403557 - 1403518 - f 71 -10.7 -3.61398 | gap 2, overlap 1403521 CCCGCGGTCGAATAA TCATGGTGGCGGCGGTCCG GCCC CGGGCCGCCGCCAC--TGC ACCGACCCGGGGAGG TERM 908 1403556 - 1403521 - f 81 -16 -2.93073 | overlap 1403518 GCGGTCGAATAATCA TGGTGGCGGCGGTCCG GCCC CGGGCCGCCGCCACTG CACCGACCCGGGGAG xerD 1403584 - 1404549 + | site-specific tyrosine recombinase XerD TERM 909 1404911 - 1404888 - g 79 -3.1 -4.8622 | gap 1, overlap 1404907 TTGTGCAACCAAAAA GGT-GGGGTC GGCAA GACCACTACC ACCATCAACCTGGGG Tfu_1202 1404684 - 1405643 + | putative partitioning or sporulation protein Tfu_1203 1405640 - 1405999 + | hypothetical protein Tfu_1204 1406058 - 1406882 + | condensin subunit ScpA Tfu_1205 1406879 - 1407460 + | condensin subunit ScpB Tfu_1206 1407441 - 1408568 + | pseudouridine synthase, Rsu Tfu_1207 1408594 - 1408956 + | chorismate mutase Tfu_1208 1409054 - 1410121 + | prephenate dehydrogenase Tfu_1209 1410231 - 1410953 + | cytidylate kinase TERM 910 1411331 - 1411302 - g 74 -10.7 -3.6869 | gap 1 GAGACCAACGCTAAA GGACTGGC-CGCCA TGG TGGCGCGCCAAGCC GAATACGCCGCAGAA TERM 911 1411626 - 1411602 - g 73 -9.9 -3.92542 | overlap 1411619 GCCATGCCGAAAGAA CCGCCCCCTCT CGA AGAGGCCGCGG TCGACGGGCCGCGCC engA 1411050 - 1412441 + | GTP-binding protein EngA Tfu_1211 1412582 - 1413082 + | hypothetical protein Tfu_1212 1413251 - 1414072 + | fructose-1 6-bisphosphatase TERM 912 1414545 - 1414557 + F 91 -10.5 -4.63218 | TGACCCTCTTCCCGA CCGGG TCT CCCGG TTTTATTCGGAAAGG Tfu_1213 1414945 - 1415961 + | xylanase TERM 913 1416023 - 1415975 - T 93 -18.7 -3.28791 | opp_overlap 1416017, overlap 1415976 AGTCCTGCCGGATAA CCCCAGCTGTGGCGCGGCGGTTC AGG GGGCCGCCGCGCCACACCCGCGA GCAGAGCACTCCGCT TERM 914 1416022 - 1415976 - T 91 -20 -2.57132 | opp_overlap 1416017, overlap 1415975 GTCCTGCCGGATAAC CCCAGCTGTGGCGCGGCGGTTC AGG GGGCCGCCGCGCCACACCCGCG AGCAGAGCACTCCGC TERM 915 1416202 - 1416248 + T 77 -12.9 -3.31144 | gap 1, opp_overlap 1416206 1416207 1416210, overlap 1416210 CCCGAGGGGATAGGG GAAACGC-ACGGGGCCCGCTGC TGTC GCAGCGGGCCCCGTTGCATGGA TTCTGACGGTCGGAA TERM 916 1416244 - 1416206 - T 100 -24.7 -3.63805 | gap 1, opp_overlap 1416202 1416210, overlap 1416207 1416210 AGGGGATAGGGGAAA CGC-ACGGGGCCCGCTGC TGTC GCAGCGGGCCCCGTTGCA TGGATTCTGACGGTC TERM 917 1416243 - 1416207 - T 100 -26 -2.77962 | gap 1, opp_overlap 1416202 1416210, overlap 1416206 1416210 GGGGATAGGGGAAAC GC-ACGGGGCCCGCTGC TGTC GCAGCGGGCCCCGTTGC ATGGATTCTGACGGT TERM 918 1416210 - 1416239 + T 100 -26.5 -3.10905 | opp_overlap 1416207 1416206 1416210, overlap 1416202 GATAGGGGAAACGCA CGGGGCCCGCTGC TGTC GCAGCGGGCCCCG TTGCATGGATTCTGA TERM 919 1416239 - 1416210 - T 100 -26.5 -2.6583 | opp_overlap 1416210 1416202, overlap 1416207 1416206 GATAGGGGAAACGCA CGGGGCCCGCTGC TGTC GCAGCGGGCCCCG TTGCATGGATTCTGA Tfu_1214 1417124 - 1416342 - | molecular chaperone (small heat shock protein) TERM 920 1416929 - 1416915 - G 70 -8.6 -3.87815 | opp_overlap 1416896 1416913 1416911 1416915, overlap 1416901 TTTGAGTCCCATAAA CTCAAC TTT GTTGAG TGTGTTGCGTGTCAC Tfu_1215 1417529 - 1419088 + | methylmalonyl-CoA decarboxylase alpha chain Tfu_1216 1419335 - 1420795 + | hypothetical protein Tfu_1217 1420834 - 1421163 + | putative cyclase II Tfu_1218 1421208 - 1422470 + | actinorhodin polyketide beta-ketoacyl synthase alpha subunit / 3-oxoacyl-ACP synthase I Tfu_1219 1422467 - 1423675 + | actinorhodin polyketide beta-ketoacyl synthase beta subunit / 3-oxoacyl-ACP synthase II Tfu_1220 1423721 - 1423981 + | actinorhodin polyketide synthase acyl carrier protein / 3-oxoacyl-ACP synthase acyl carrier protein Tfu_1221 1424008 - 1424793 + | ketoacyl reductase Tfu_1222 1424819 - 1425763 + | actinorhodin polyketide synthase bifunctional cyclase/dehydratase Tfu_1223 1425799 - 1427214 + | putative rifampin monooxygenase Tfu_1224 1427201 - 1427968 + | putative 3-oxoacyl-(acyl-carrier protein) reductase Tfu_1225 1428006 - 1429184 + | putative cytochrome P450 Tfu_1226 1429213 - 1429407 + | hypothetical protein Tfu_1227 1429404 - 1430648 + | putative ferredoxin reductase TERM 921 1431129 - 1431112 - g 76 -14.1 -3.53012 | overlap 1431067 CCGGTCGCGGTCAAA GCCGCCC ACGG GGGCGGC GGCCGCGGGATGCGC Tfu_1228 1430641 - 1432410 + | putative acyl-CoA carboxylase complex A subunit TERM 922 1433189 - 1433212 + G 87 -5.2 -5.16237 | gap 1, overlap 1433196 1433197 CGTCCTTCCCCACCT GGGGCG-ACGG CGG CTGTCCGCCAC TTTTTTCGTCCCCTT Tfu_1229 1432407 - 1433441 + | putative 3-oxoacyl-ACP synthase III TERM 923 1433992 - 1434035 + G 74 -16.9 -2.73875 | opp_overlap 1434006, overlap 1433990 1434007 GGCACCTATCGGAGC GCGCTGG-GATCGAACGTGCC CAAC GGCAC-TTCGATCACCCGCGC TGATCTTGCCCGCGC Tfu_1230 1433476 - 1434111 + | hypothetical protein Tfu_1231 1434108 - 1435109 + | modular polyketide synthase Tfu_1232 1435779 - 1435123 - | TetR family transcriptional regulator TERM 924 1435825 - 1435871 + r 73 -12.3 -3.30124 | gap 1, opp_overlap 1435827, overlap 1435827 CCTGTCCCACCTAGA TACCGGT-ACGCGTCCTTGCAG GCCC CTGCAAGGACGCGCCGCAGGTC TTCTCCCAGGTCAGG TERM 925 1435827 - 1435869 + r 83 -14.9 -3.21924 | gap 1, opp_overlap 1435827, overlap 1435825 TGTCCCACCTAGATA CCGGT-ACGCGTCCTTGCAG GCCC CTGCAAGGACGCGCCGCAGG TCTTCTCCCAGGTCA TERM 926 1435868 - 1435827 - R 87 -17.3 -2.91264 | opp_overlap 1435827 1435825 TGTCCCACCTAGATA CCGGTACGCGTCCTTGCAG GCCC CTGCAAGGACGCGCCGCAG GTCTTCTCCCAGGTC Tfu_1233 1437399 - 1435882 - | putative transmembrane efflux protein TERM 927 1437942 - 1437896 - g 95 -18.7 -3.53811 | gap 2 GTCAGCGTCGTCAAA CCGCTC-GGC-CGCGCCACCCGC GTA GCGGGCGGCTGGCGCCTGAGCGG CCGGTGGACCTACGC Tfu_1234 1437548 - 1438660 + | putative hydrolase TERM 928 1438881 - 1438867 - g 70 -12.8 -3.30124 | opp_overlap 1438867 CCGGACCCCGGAGAA GGCGGC CCT GCCGCC TTCCGTCGAAGTCGT Tfu_1235 1438763 - 1439581 + | hypothetical protein Tfu_1236 1439578 - 1440261 + | putative reductase Tfu_1237 1440251 - 1440724 + | hypothetical protein TERM 929 1440763 - 1440796 + F 100 -20.3 -4.7033 | opp_overlap 1440756 1440755 TCAGTAAGGGGTGCA GCTCAGCGTCCGCGC GTCC GCGCAGGCGCTGAGC TTTTCTATTCCGTTG Tfu_1238 1441329 - 1441985 + | response regulator receiver TERM 930 1442117 - 1442093 - T 71 -7.7 -4.19258 | AGAGCCCATCGAAAA GCTCTTCCCGC CAG GCAGGGAGTGC TGAGCACACCAGGGG TERM 931 1442984 - 1443036 + T 90 -15.7 -3.48276 | gap 1, opp_overlap 1442988, overlap 1442986 GACATCCGATGCCCG AACACG-TGTGAAGGCCCGCCACC AGTTCC GGTAGCGGACCTTCACACCGTGTC TTCTGTCGGGACGGC TERM 932 1442986 - 1443034 + T 93 -18.3 -3.31726 | gap 1, opp_overlap 1442988, overlap 1442984 CATCCGATGCCCGAA CACG-TGTGAAGGCCCGCCACC AGTTCC GGTAGCGGACCTTCACACCGTG TCTTCTGTCGGGACG TERM 933 1443031 - 1442988 - T 100 -20.4 -3.03124 | opp_overlap 1442986 1442984 TCCGATGCCCGAACA CGTGTGAAGGCCCGCCACCA GTTC CGGTAGCGGACCTTCACACC GTGTCTTCTGTCGGG Tfu_1239 1444514 - 1443333 - | putative hydrolase TERM 934 1443665 - 1443636 - G 72 -9.2 -3.96148 | overlap 1443614 1443637 GGTGCCGAGCACAAA GTCCCACCCGAG AACCTG CTCGGGCAGGGC TTCGGGCGGATAGGT Tfu_1240 1444756 - 1445217 + | hypothetical protein Tfu_1241 1445239 - 1445721 + | hypothetical protein Tfu_1242 1446231 - 1447157 + | short chain dehydrogenase Tfu_1243 1447606 - 1447241 - | hypothetical protein TERM 935 1448675 - 1448658 - g 72 -3.3 -4.60255 | overlap 1448648 1448659 AGAAGGGCGGAAAAA CGGCCGA TCCC CCAGCCA GAAATCCGCTCTCCG Tfu_1244 1448285 - 1449832 + | helix-hairpin-helix DNA-binding motif-containing protein Tfu_1245 1449849 - 1450328 + | hypothetical protein TERM 936 1450507 - 1450458 - f 81 -12.2 -3.85698 | gap 2, overlap 1450462 TCCGCGCCTCAGAAA GGAATGCGACGGTTTGCCGTCCGC CGCC GTGGGCGGCAAACCGTC-CAG-CC GCCTACGATTCCACT TERM 937 1450504 - 1450462 - f 91 -17.1 -3.6053 | gap 1, overlap 1450458 CGCCTCAGAAAGGAA TGCGACGGTTTGCCGTCCGC CGCC GTGGGCGGCAAACCGTC-CA GCCGCCTACGATTCC TERM 938 1450931 - 1450904 - g 83 -4.8 -4.93877 | overlap 1450899 1450905 CCGGACGAAAGAAAA GTCGTTTTCCCG GTTT CGGGAAAGCAAT GTCAGAAAAAGGAGC Tfu_1246 1450523 - 1451074 + | hypothetical protein Tfu_1247 1451278 - 1451724 + | hypothetical protein Tfu_1248 1452773 - 1451970 - | helix-hairpin-helix DNA-binding motif-containing protein TERM 939 1452927 - 1452885 - H 80 -14.9 -3.06261 | overlap 1452890 TGGGAATGGTGAATA GCGAAGGCGCGAGCGGAAA CGCTT TCTCCGCTCCAACCTTCGC AAACATTCCTCATTC Tfu_1249 1453321 - 1453674 + | hypothetical protein Tfu_1250 1455029 - 1454055 - | hypothetical protein TERM 940 1455235 - 1455273 + r 74 -2.2 -4.82901 | gap 1, opp_overlap 1455234, overlap 1455254 1455257 GTGAGGCAAGGGAAG GGGAGCAGAGCGCCCCG GTGCAG CGAGACACCC-GCTCCC TTTTTCTGCAGGACC Tfu_1251 1456007 - 1455519 - | hypothetical protein Tfu_1252 1456943 - 1456359 - | hypothetical protein TERM 941 1456938 - 1456913 - G 75 -4.5 -4.65895 | overlap 1456915 CCGGCCAGCTAAAAA CAGGGCCGCCC AACC GGGCGGTGCTC CCCACGCACGTGGGG TERM 942 1457060 - 1457035 - R 75 -4.5 -4.65895 | overlap 1457037 CCGGCCAGCTAAAAA CAGGGCCGCCC AACC GGGCGGTGCTC CCCACGCACGTGGGG Tfu_1253 1459104 - 1457773 - | hypothetical protein Tfu_1254 1459532 - 1459101 - | hypothetical protein Tfu_1255 1460305 - 1459712 - | hypothetical protein Tfu_1256 1460506 - 1460336 - | hypothetical protein Tfu_1257 1461480 - 1462670 + | cytochrome P450 monooxygenase TERM 943 1463080 - 1463094 + G 75 -9.2 -4.11692 | overlap 1463057 GGGAGCTCACCGATC CCGCGG CAC CCGTGG TTTTCACGGTCGGTG Tfu_1258 1462776 - 1463492 + | hypothetical protein Tfu_1259 1463820 - 1464572 + | enoyl-CoA hydratase Tfu_1260 1464674 - 1465228 + | maltose O-acetyltransferase Tfu_1261 1465570 - 1465256 - | small multidrug resistance efflux protein Tfu_1262 1466042 - 1466743 + | hypothetical protein TERM 944 1466809 - 1466822 + T 81 -5.3 -4.85599 | TGACACCCAGCGTTT TCTTC TCTG GAAGA TTTTTCTCGGCTGCC TERM 945 1466878 - 1466896 + T 87 -7.4 -4.80167 | opp_overlap 1466871 GGGAGAATGGCTCTC CGGCGTTT CCG AAGCGCTG TTTTCGTTTTTGGTG TERM 946 1467092 - 1467125 + T 75 -4.5 -4.71426 | AAGATCCTCGACAGT GGCTGATTTATCCCT TCGT GGGGATCGATAGGCC TTTTGTTCCTCGACG TERM 947 1467341 - 1467353 + T 74 -4.7 -4.52857 | overlap 1467339 GGAGCTGTGTTGTGC GGGCG GTT CGCGC TTTTCTGTCGCCGGT Tfu_1263 1468667 - 1467390 - | CBS TERM 948 1468915 - 1468891 - g 76 -13.5 -3.48395 | overlap 1468892 AGCCGTGCCAGAGAA CGCGGAACCGC TGT GCGGTCCCGCC CAGGTGGACGAGTCC TERM 949 1468914 - 1468892 - g 78 -17 -2.68823 | overlap 1468891 GCCGTGCCAGAGAAC GCGGAACCGC TGT GCGGTCCCGC CCAGGTGGACGAGTC Tfu_1264 1468847 - 1469431 + | hypothetical protein TERM 950 1469471 - 1469461 - f 77 -4.6 -4.62069 | overlap 1469405 CTGCCAGGCGAAAAA CGGC AGC ACCG GGAAGACACCTGTGC Tfu_1265 1469765 - 1470643 + | 2-hydroxy-3-oxopropionate reductase Tfu_1266 1470793 - 1471695 + | AraC family transcriptional regulator TERM 951 1471759 - 1471733 - f 87 -18 -2.78384 | GGGCTGTTGATGACA GTGGCCGACTGC GGT GCGGTCGGCCAC TGATACCCCCGTAAG Tfu_1267 1471942 - 1472613 + | frnE protein TERM 952 1472678 - 1472647 - T 90 -15.8 -3.49618 | opp_overlap 1472643, overlap 1472648 GGGTGAGAGAAGGAA GGGCCCCGCCGG TGTGGCTG CCGGCGGGGCCT GCACTGTTCCGGTCA TERM 953 1472677 - 1472648 - T 90 -19.3 -2.69449 | opp_overlap 1472643, overlap 1472647 GGTGAGAGAAGGAAG GGCCCCGCCGG TGTGGCTG CCGGCGGGGCC TGCACTGTTCCGGTC Tfu_1268 1473373 - 1472705 - | putative secreted cellulose-binding protein TERM 954 1473499 - 1473481 - R 76 -2.4 -4.90455 | overlap 1473484 AGAGAGTGATAAAAA TAAGAGAA TAT TTCCCTTT TGTTTCATAAGTCGG TERM 955 1473496 - 1473484 - R 71 -4.1 -4.5448 | overlap 1473481 GAGTGATAAAAATAA GAGAA TAT TTCCC TTTTGTTTCATAAGT Tfu_1269 1474679 - 1473591 - | hypothetical protein TERM 956 1474359 - 1474317 - G 86 -2.6 -5.1971 | overlap 1474339 ACCAAAAAGGAAAAA GGCAGCTATCC-CTCCCAGC CAACC GC-GGACGCGGAAAGCAGCC ACAATCCCTGCGAGC Tfu_1270 1475999 - 1474920 - | alcohol dehydrogenase class III Tfu_1271 1477930 - 1476173 - | PAS:protein phosphatase 2C-like:GAF TERM 957 1478052 - 1478001 - R 93 -18.1 -3.7732 | gap 3, opp_overlap 1478009 1478012, overlap 1478002 GCCGCAGAGCAATAA CCCCGGGCATAGGGCTGGGGCGGTGC CCG GCACCGCCCCAGCCCT--GCT-GTGG TCGGGGCTGGTCAGG TERM 958 1478052 - 1478002 - R 89 -18.3 -2.86071 | gap 2, opp_overlap 1478009 1478012, overlap 1478001 CCGCAGAGCAATAAC CCCGGGCATAGGGCTGGGGCGGTGC CCG GCACCGCCCCAGCCCT--GCTGTGG TCGGGGCTGGTCAGG TERM 959 1478009 - 1478047 + r 100 -26.8 -2.78816 | opp_overlap 1478001 1478002, overlap 1478012 GCAATAACCCCGGGC ATAGGGCTGGGGCGGTGC CCG GCACCGCCCCAGCCCTGC TGTGGTCGGGGCTGG TERM 960 1478012 - 1478044 + r 100 -30.7 -2.66316 | opp_overlap 1478001 1478002, overlap 1478009 ATAACCCCGGGCATA GGGCTGGGGCGGTGC CCG GCACCGCCCCAGCCC TGCTGTGGTCGGGGC Tfu_1272 1478776 - 1478063 - | hypothetical protein TERM 961 1478818 - 1478783 - R 100 -26.3 -4.07877 | GGAGCGCACAAAGAA CCGTCCCCGGTGCTG GGGGAT CAGCACCGGGGACGG TAGCGGCGGTATCCC Tfu_1273 1480033 - 1478843 - | putative oxidoreductase Tfu_1274 1481440 - 1480055 - | hypothetical protein Tfu_1275 1481495 - 1481686 + | hypothetical protein TERM 962 1481695 - 1481710 + F 71 -10.4 -3.56921 | overlap 1481694 CGAGTGAGATCGTCG GACGCG GGGC CGCGTC TCTTCTTCTCTTAAG TERM 963 1481741 - 1481730 - f 72 -3.6 -4.63218 | overlap 1481732 CTTCTCTTAAGAAAA GAGG CGGG CCCC GGCGAACCTGCCCTT Tfu_1276 1481841 - 1482809 + | alcohol dehydrogenase TERM 964 1482879 - 1482915 + F 100 -4.6 -5.64421 | gap 3 TTCGCGCTACGTAGT GGGTGGTTCGCCATTGT GTTCTG AC-ATGGCG--CCACCC TTTTTTCTTTGCCGT TERM 965 1482932 - 1482966 + F 78 -7.8 -4.44797 | overlap 1482924 1482936 1482938 TTTTTCTTTGCCGTA GCGCAATCTCTAGCAC TCT GTGCTTGAGATGTTGC TTTTCGTATTACTAG TERM 966 1483514 - 1483489 - g 74 -13.3 -3.30441 | opp_overlap 1483484 CATGATGCGCGACAA CCTGGAAGACC AGGA GGTCTTCCTGG AGCAGAACCGGCGCT Tfu_1277 1483073 - 1483807 + | GntR family transcriptional regulator Tfu_1278 1483978 - 1485171 + | thiolase Tfu_1279 1485202 - 1485960 + | short chain dehydrogenase Tfu_1280 1486026 - 1486808 + | enoyl-CoA hydratase TERM 967 1486862 - 1486827 - f 71 -13.2 -3.03452 | opp_overlap 1486831, overlap 1486820 GAATAAGAGCAGACA GGCATCGAGGGCGCTC GAGC GGGCGCCCTCGATGTA TCGAAGGGGGAAACC TERM 968 1486831 - 1486858 + F 93 -19.2 -2.87132 | opp_overlap 1486827 1486820 AAGAGCAGACAGGCA TCGAGGGCGCTC GAGC GGGCGCCCTCGA TGTATCGAAGGGGGA Tfu_1281 1487168 - 1488331 + | butyryl-CoA dehydrogenase Tfu_1282 1488500 - 1489678 + | putative acyl-CoA dehydrogenase TERM 969 1489702 - 1489726 + F 73 -15.1 -2.52543 | overlap 1489692 1489689 GCCAGCCGCAGCGGA TGCGGTTGTGC TCT GCATAACCGCA TCCCTTGACCCACCT Tfu_1283 1489786 - 1490619 + | short-chain type dehydrogenase/reductase TERM 970 1490671 - 1490634 - f 100 -23.5 -2.62983 | gap 1 GCGACCTGGACACCA CCTCGTCCGCGCGGGAGC ACG GC-CCCGGGCGGACGAGG GCTGAACGGGAGGAC Tfu_1284 1490690 - 1491856 + | putative acyl-CoA dehydrogenase Tfu_1285 1491856 - 1492764 + | citryl-CoA lyase Tfu_1286 1492767 - 1493246 + | MaoC dehydratase TERM 971 1493457 - 1493411 - g 95 -14.5 -4.015 | GGAGCCACTAAAGAA CAGGTCGACG-AGGCGATCCGGG CCG CCCGCACCGCCTTCGAC-ACCTG GTCGAAGATGTCGGG Tfu_1287 1493246 - 1494724 + | betaine-aldehyde dehydrogenase Tfu_1288 1494772 - 1496001 + | hypothetical protein TERM 972 1496474 - 1496491 + G 70 -8.4 -3.87373 | overlap 1496470 GAACTTGTTGAGGCC CGGCTC ATGCTG GAGCCG TTTATGGCCCGTCTG Tfu_1289 1496123 - 1496884 + | GntR family transcriptional regulator TERM 973 1496994 - 1497049 + F 100 -30.7 -2.7185 | gap 1, opp_overlap 1496997, overlap 1496997 GAGGGCTGGTGACCA CAACACCCCGGTCACGGTCGGC-TGC AGTGG GCGCGTCGGCCGTGACCGGGGTGTTG TCGTTGGAAGCTCGT TERM 974 1496997 - 1497046 + F 100 -26.6 -3.51032 | gap 1, opp_overlap 1496997, overlap 1496994 GGCTGGTGACCACAA CACCCCGGTCACGGTCGGC-TGC AGTGG GCGCGTCGGCCGTGACCGGGGTG TTGTCGTTGGAAGCT TERM 975 1497046 - 1496997 - f 100 -22.2 -3.40403 | gap 1, opp_overlap 1496997 1496994 GGCTGGTGACCACAA CACCCCGGTCACGGTCGGCTGCA GTGGG CGC-GTCGGCCGTGACCGGGGTG TTGTCGTTGGAAGCT Tfu_1290 1497370 - 1498548 + | branched chain amino acid ABC transporter permease Tfu_1291 1498650 - 1499537 + | amino-acid transmembrane lipoprotein ABC transporter Tfu_1292 1499534 - 1500478 + | branched chain amino acid ABC transporter permease Tfu_1293 1500475 - 1501251 + | ABC-type branched-chain amino acid transport systems ATPase component Tfu_1294 1501244 - 1501960 + | ABC-type branched-chain amino acid transport systems ATPase component TERM 976 1501968 - 1501998 + F 100 -28.4 -2.87211 | GTTCCTGACCGTAGG CGTCGGGGCCGTGC AGT GCACGGCCCCGACG TGTGTCACGAGACGT TERM 977 1502518 - 1502557 + G 74 -13.6 -3.36492 | gap 1, overlap 1502516 CCTGGGGCTGCCCGT GGGCGGCCTGGTCGCCGAA TAC TTCGGCTACCAGGG-GCTC TTCTGGGGTTCGGCG Tfu_1295 1502048 - 1503550 + | putative membrane transport protein TERM 978 1503915 - 1503889 - g 72 -13.6 -3.12668 | CACGCCGAGATCGAA CGCGGCGGGGAG TTC CTCGTCGCCGCG TTCCGCTACGACGAC Tfu_1296 1503583 - 1504080 + | hypothetical protein TERM 979 1504135 - 1504091 - T 100 -21.4 -3.73775 | gap 1, overlap 1504094 GGTAGGCCCAGCAAA GGA-GGTGCCGGGGCGGCCGC GGAA GCAGCCGCCCCGGATCCGTCC CGTCGCAAGGTGAGG TERM 980 1504131 - 1504094 - T 100 -21.9 -2.96873 | overlap 1504091 AGGCCCAGCAAAGGA GGTGCCGGGGCGGCCGC GGAA GCAGCCGCCCCGGATCC GTCCCGTCGCAAGGT Tfu_1297 1505128 - 1504340 - | amidohydrolase family protein Tfu_1298 1505885 - 1505136 - | 2-deoxy-D-gluconate 3-dehydrogenase Tfu_1299 1506159 - 1506971 + | dihydroxynaphthoic acid synthase Tfu_1300 1506971 - 1508614 + | DitJ-like CoA ligase TERM 981 1508777 - 1508738 - T 79 -11.5 -3.85698 | gap 1, overlap 1508740 1508741 CCCGGCCCGCACAAA GAGGAAGGCCCGTCCC TTGGGTGGT GGGACGGGCCTT-CGC GTGTGCGGAGGGGAC TERM 982 1508776 - 1508740 - T 86 -15.2 -3.51934 | overlap 1508738 1508741 CGGCCCGCACAAAGA GGAAGGCCCGTCCC TTGGGTGGT GGGACGGGCCTTCG CGTGTGCGGAGGGGA TERM 983 1508775 - 1508741 - T 87 -18.7 -2.70946 | overlap 1508740 1508738 GGCCCGCACAAAGAG GAAGGCCCGTCCC TTGGGTGGT GGGACGGGCCTTC GCGTGTGCGGAGGGG Tfu_1301 1509851 - 1508841 - | coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductase TERM 984 1509294 - 1509312 + g 74 -11.6 -3.78934 | GGCGTCGCCGAGCCG GGCGGCGC GCT GCGCCCCC TTCTTGTGCGGGCCG Tfu_1302 1510019 - 1512097 + | 6-carboxyhexanoate--COA ligase TERM 985 1512863 - 1512832 - g 80 -15.8 -3.14132 | opp_overlap 1512840 CTCCCCGCTGACCAA CCAGCGCACCGACG CCTA CGGCGGTTCGCTGG AGAACCGGGCGCGGT Tfu_1303 1512221 - 1514236 + | NADH:flavin oxidoreductase TERM 986 1514254 - 1514299 + F 100 -24.1 -2.69151 | gap 1, overlap 1514256 1514273 CTGGCGGACTGGTTC CGGCGGGCTTCCCGCACCGTGG CGC TC-CGGTGTGGGAGGCCCGCTG TCGTATGTGCGGGCG TERM 987 1514256 - 1514297 + F 100 -23.1 -2.88999 | gap 1, overlap 1514254 1514273 GGCGGACTGGTTCCG GCGGGCTTCCCGCACCGTGG CGC TC-CGGTGTGGGAGGCCCGC TGTCGTATGTGCGGG TERM 988 1514468 - 1514436 - g 79 -14.9 -3.30124 | overlap 1514437 CCGTACCCCCGAGAA CCTGTCCTGCCGGCA CCG CACCGACAGGACAGA ATCCCCCAACTAGTG TERM 989 1514467 - 1514437 - g 73 -16.2 -2.57931 | overlap 1514436 CGTACCCCCGAGAAC CTGTCCTGCCGGCA CCG CACCGACAGGACAG AATCCCCCAACTAGT Tfu_1304 1514304 - 1515557 + | nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein Tfu_1305 1515566 - 1516399 + | ABC-type nitrate/sulfonate/bicarbonate transport system ATPase component TERM 990 1516497 - 1516439 - g 78 -18.1 -2.80252 | opp_overlap 1516491, overlap 1516434 1516436 AGCCGGACAAGACCA CCACCG-ACTCGGCCGCACCCGCGACCGC GCC GCAGCCGCGC-CGCAGCCGGGCGCGGTGG CGGCCCCGGCTCCAC Tfu_1306 1516399 - 1517259 + | ABC transporter, permease component TERM 991 1517307 - 1517252 - T 100 -23.9 -2.73622 | overlap 1517249 1517244 AGAACAACGACACCA CGGCCTAAGCGCCGCGGGCAGGGAC CGCAGC GTCCCCGCCCGCAGCTCCGCGGCCG GGGCACGCCCCGGCC TERM 992 1517367 - 1517338 - T 100 -19.3 -4.34402 | CGGGGGACACGAAAA CGGCCCTCCCGCA GCGT CACGGGAGGGCCG CCACACCGACCGGCA Tfu_1307 1519124 - 1517388 - | iron ABC transporter permease TERM 993 1517674 - 1517660 - G 78 -8.5 -4.26076 | TCACCCGGAGGAAAA CCCGC CAGTC GCGGG CACCGGACACTTCCG Tfu_1308 1520274 - 1519117 - | ABC-type spermidine/putrescine transport systems ATPase components TERM 994 1519851 - 1519870 + g 75 -5.6 -4.56597 | overlap 1519834 1519852 CGACCCGGGCACGGA TCTGCTCC TTGG GGAGCCGG TTTTTGCGGGGACCG Tfu_1309 1521311 - 1520298 - | putative transporter TERM 995 1521706 - 1521690 - R 71 -9.3 -3.73224 | CCACCCGTCAGCAAA GCGCCGG CAC CCCGCGC GGAACACCCCGGAAC Tfu_1310 1522529 - 1521888 - | CBS Tfu_1311 1525246 - 1522586 - | hypothetical protein TERM 996 1524823 - 1524806 - G 71 -2.6 -4.55625 | opp_overlap 1524806 ACCAATATCAGAAAA CACCCG CAGCAT CGCGTG ATTGTCGGGCAGCAC Tfu_1312 1525481 - 1525993 + | hypothetical protein Tfu_1313 1525990 - 1526817 + | putative citrate lyase beta subunit TERM 997 1527590 - 1527565 - g 75 -16.1 -2.91264 | GTCTGCACCCACACA GGCGGGGTGCG TCCC CGCACCCGGCC GCACCGCGTCCACTA Tfu_1314 1527145 - 1528005 + | dihydropteroate synthase Tfu_1315 1528019 - 1528660 + | hypothetical protein Tfu_1316 1528688 - 1529461 + | hypothetical protein Tfu_1317 1529622 - 1530137 + | hypothetical protein Tfu_1318 1530401 - 1530757 + | hypothetical protein Tfu_1319 1531332 - 1530754 - | hypothetical protein TERM 998 1531507 - 1531545 + G 76 -2.2 -4.78752 | GGTGTGGCTGTCGCC GGGGCTCATGGTGGGGCT GGC ACCTCCACCATTCACACC TTTTTGCCTTCTCCT Tfu_1320 1531453 - 1531977 + | hypothetical protein TERM 999 1532272 - 1532260 - g 77 -3.4 -4.68593 | opp_overlap 1532266 1532269 CTGATGACCCAAAAA CGAA TGTTT TTCG CGGCCGGAACCGTTG TERM 1000 1532269 - 1532303 + G 70 -15.6 -2.76171 | opp_overlap 1532260, overlap 1532266 CAAAAACGAATGTTT TTCGCGGCCGGAACCG TTG CGGTCCTGGCCGCGGC TGGTATTGGCTACCT Tfu_1321 1532248 - 1532934 + | hypothetical protein Tfu_1322 1532940 - 1533929 + | hypothetical protein Tfu_1323 1533952 - 1534350 + | transposase-related protein Tfu_1324 1534351 - 1535544 + | transposase Tfu_1325 1535581 - 1536456 + | hypothetical protein Tfu_1326 1536671 - 1537243 + | hypothetical protein Tfu_1327 1537240 - 1537581 + | hypothetical protein TERM 1001 1538190 - 1538203 + F 75 -3.9 -4.64861 | GCGTGTCGACCAACG TCTTT GAAC AAAGA TTTGTTTTACGGGGG Tfu_1328 1538303 - 1538881 + | hypothetical protein TERM 1002 1539086 - 1539116 + F 84 -8.8 -4.46212 | opp_overlap 1539086, overlap 1539087 AACCGCCATCCAACA TCGTCTGCGCATGG CAT CCCCGCGCTGACGG TTTTGTGCTGCCGCC Tfu_1329 1539620 - 1541047 + | sensor histidine kinase Tfu_1330 1541032 - 1541691 + | response regulator receiver Tfu_1331 1541716 - 1542345 + | hypothetical protein Tfu_1332 1542342 - 1543097 + | hypothetical protein TERM 1003 1543227 - 1543244 + T 70 -5.5 -4.28994 | overlap 1543229 1543230 TCCTCGTCCTGATCA TGGCGGT GCCG GCCGCTA TTTTCCTGGCTGGTG Tfu_1333 1544230 - 1543343 - | hypothetical protein TERM 1004 1544120 - 1544107 - G 72 -5.9 -4.25104 | CGCCGTGCAGGAAAA CCAGC GGCT GCCGG TCCGGGTCGCCCCAC Tfu_1334 1545358 - 1544432 - | RNA polymerase sigma factor TERM 1005 1544581 - 1544549 - G 71 -11.9 -3.62597 | CTTATTGCCGAAGAA CCGCAGCAGGATCAC GCG GCGTTCCCGCTCCGG CAGTCGGTCCAACGC Tfu_1335 1546514 - 1545636 - | hypothetical protein Tfu_1336 1546710 - 1547480 + | Sir2 family regulator Tfu_1337 1547713 - 1547546 - | hypothetical protein Tfu_1338 1550780 - 1547778 - | ATPase TERM 1006 1550100 - 1550138 + g 72 -14.1 -3.14132 | gap 2, overlap 1550103 GCTCGCCCACGCCCC GAACT-CGGGG-AAGCTCG CAG CGAGCTTGTCCCGCAGTTC TTCATAGCGGCGCAC TERM 1007 1550103 - 1550135 + g 71 -10 -3.71848 | gap 2, overlap 1550100 CGCCCACGCCCCGAA CT-CGGGG-AAGCTCG CAG CGAGCTTGTCCCGCAG TTCTTCATAGCGGCG Tfu_1339 1554086 - 1550904 - | hypothetical protein TERM 1008 1553672 - 1553698 + g 72 -14.5 -2.83164 | gap 1 TGGCCAGCTCAGGGC CGCCCGACGCTG GAGG CAGCGTCGG-CG TGTCCTGCTCGATCC TERM 1009 1554432 - 1554407 - g 71 -2.5 -4.66264 | gap 1 CAAAATGGTGAAAAA CCGG-CTCCACT TGG ATTTGAGTCCGG TGGAAGACGACCGGG Tfu_1340 1554213 - 1554575 + | hypothetical protein Tfu_1341 1555484 - 1554798 - | uracil-DNA glycosylase Tfu_1342 1557121 - 1555535 - | tyrosine protein kinase:Serine/threonine protein kinase TERM 1010 1555747 - 1555768 + g 71 -2.8 -4.56775 | opp_overlap 1555732, overlap 1555745 GCTGCTGCTCTAGTG CGGCGGCG AGATCC CGCAGCAG TTTTTCGGCGCCCGT TERM 1011 1556150 - 1556185 + g 73 -12 -3.50853 | gap 2 GGCACCGATCCGCTG CG-CT-GCTGCAGCGG CCTGCC CCGCTGCAGCGAGACG TTCTGCTTCCACCCA TERM 1012 1557325 - 1557303 - H 72 -7 -4.2679 | gap 1 GAATTGGTAGCAAAA CGCTCCTGC CTGGCT GCAGG-GCG GAAGGGGAAGCTGAG Tfu_1343 1557427 - 1558551 + | putative transport protein Tfu_1344 1559285 - 1558548 - | hypothetical protein Tfu_1345 1561117 - 1559321 - | hypothetical protein TERM 1013 1561215 - 1561176 - R 77 -4.8 -4.65895 | gap 1, opp_overlap 1561190 CGGGTCACTGAAAAA CGGGGACGCGGTAGCGGAG GAT CTCCG-TGTTGCGCTCCCG GACTCCGTTGCAGGC Tfu_1346 1562088 - 1561414 - | hypothetical protein Tfu_1347 1562984 - 1562148 - | putative lipase TERM 1014 1562919 - 1562889 - G 82 -13.8 -3.75738 | CAGCACCACCAAGAA GGCGGGGTCGCCGG CAG CCGGGGCCCACGCC CGCACGTGCAGGCGC TERM 1015 1563542 - 1563521 - g 71 -2.9 -4.59109 | gap 1, overlap 1563522 1563523 1563525 GACACCTTCGAAAAA CTCACCCGCC GCC GACGGCTG-G ACGACGTGCTCGCCG TERM 1016 1564012 - 1563962 - g 73 -12.6 -3.53444 | gap 2 CTATTTGCCCGCAAA GAGTCCGACCT-GCGCG-GCCCGC TGCGC GCGGGCGCGAGCGACGCCGAACTC GCCGAGCGGTGGCGG moaA 1563128 - 1564117 + | molybdenum cofactor biosynthesis protein A TERM 1017 1564214 - 1564172 - T 100 -22.1 -4.68724 | gap 1 CCACGCAACAGAAAA GCGC-CCCCGCGGCCTTCCC AGCC GAGAAGACCGCGGAGAGCGC TTACCCAATGGGCCG Tfu_1349 1565931 - 1564255 - | putative type I restriction system adenine methylase Tfu_1350 1566200 - 1566865 + | hypothetical protein Tfu_1351 1568004 - 1567105 - | putative DNA-binding protein Tfu_1352 1568588 - 1569025 + | hypothetical protein Tfu_1353 1569342 - 1570757 + | n-acetylgalactosamine-6-sulfate sulfatase Tfu_1354 1570757 - 1571593 + | transmembrane transport protein TERM 1018 1572817 - 1572791 - f 100 -15.2 -4.89567 | opp_overlap 1572791 GCCCAAAAGAGAAAA GCTCTGGGGG TATATAC CCCCCAGAGC TTTGTCAGCGATTGT TERM 1019 1572791 - 1572817 + F 91 -15.2 -3.88137 | opp_overlap 1572791 GCCCAAAAGAGAAAA GCTCTGGGGG TATATAC CCCCCAGAGC TTTGTCAGCGATTGT Tfu_1355 1573598 - 1573954 + | putative MutT-family protein Tfu_1356 1574666 - 1574049 - | hypothetical protein Tfu_1357 1574764 - 1575951 + | hypothetical protein Tfu_1358 1576577 - 1576038 - | hypothetical protein Tfu_1359 1577167 - 1576781 - | hypothetical protein Tfu_1360 1578431 - 1577211 - | helix-hairpin-helix DNA-binding motif-containing protein TERM 1020 1578534 - 1578576 + r 100 -27.2 -3.57144 | GTCCAGCCATGGGCA CGGTGAAGCCCTCCCACTAG GTG TTTGTGGGAGGGCTTCACCG TTTCCGACTCAACGC Tfu_1361 1579493 - 1578708 - | hypothetical protein Tfu_1362 1579842 - 1579456 - | hypothetical protein TERM 1021 1580069 - 1580036 - H 70 -13.9 -2.64912 | opp_overlap 1580038, overlap 1580035 GCGTCAAGGGATAAC CGGCTCTCCCTTTCC GCCA GGAAAGGGAGAGCTT TTTCCTTGTGGGCCG TERM 1022 1580038 - 1580067 + H 100 -20.9 -4.93365 | opp_overlap 1580036 1580035 GTCAAGGGATAACCG GCTCTCCCTTTCC GCCA GGAAAGGGAGAGC TTTTTCCTTGTGGGC TERM 1023 1580135 - 1580160 + H 90 -7.6 -4.90455 | gap 1 TGATGCGGATGCGGG CCGCTGCGGAA CACAT TTCCGT-GCGG TTTTTGTGGGTATCT Tfu_1363 1580328 - 1580927 + | putative secreted protein TERM 1024 1580934 - 1580905 - f 85 -17.1 -3.04144 | CTGCCACCGCCAACA CCGGCCGCCACCG CCGC CGGTAGCGGCCGC GACACCACTAAGGGA Tfu_1364 1580960 - 1581373 + | hypothetical protein TERM 1025 1581463 - 1581438 - T 73 -13.9 -2.87132 | GCCCGCGGGCAGACA GCCGCAGCCCG TAGG CGAGCAGCGGC ACCCCCGGCTGGGGA Tfu_1365 1581912 - 1581415 - | putative acetyltransferase Tfu_1366 1581965 - 1582522 + | molybdenum cofactor guanylyltransferase TERM 1026 1582651 - 1582613 - T 100 -13.9 -4.82863 | gap 1, opp_overlap 1582647, overlap 1582614 1582642 CAATCAGAAAAGAAA TGACGCCGGGTGG-CTAC GGGG GCAAACCACCCGGCGTCG CAAACGGTGTTTCGA TERM 1027 1582650 - 1582614 - T 93 -17.4 -3.48091 | gap 1, opp_overlap 1582647, overlap 1582613 1582642 AATCAGAAAAGAAAT GACGCCGGGTGG-CTAC GGGG GCAAACCACCCGGCGTC GCAAACGGTGTTTCG TERM 1028 1582684 - 1582656 - T 78 -13.3 -3.53091 | opp_overlap 1582647, overlap 1582642 ACCCGGCGTCGCAAA CGGTGTTTCGA CGGGGGC TCGAAACACCG ATCCGTGCGCTTCAA TERM 1029 1582923 - 1582880 - T 100 -22.5 -3.91488 | overlap 1582883 1582901 AACGGTTTCAAAGAA GACGAGCGGCGGCGCGG AAAACCCGGG CCGCGCCGCCGCTCACC CCACGCTCCCAGACG TERM 1030 1582920 - 1582883 - T 100 -22.8 -2.72371 | overlap 1582880 1582901 GGTTTCAAAGAAGAC GAGCGGCGGCGCGG AAAACCCGGG CCGCGCCGCCGCTC ACCCCACGCTCCCAG Tfu_1367 1584378 - 1582939 - | hypothetical protein Tfu_1368 1585916 - 1584375 - | hypothetical protein Tfu_1369 1586668 - 1585913 - | hypothetical protein TERM 1031 1586347 - 1586334 - G 71 -2.3 -4.66833 | GTGGAACCGGAAAAA CAGGT GAGC ACCGG CCCTGGGCCGTCCGC Tfu_1370 1587363 - 1586665 - | hypothetical protein TERM 1032 1586781 - 1586770 - G 82 -5.8 -4.72846 | GTACACACCGAAAAA CTCG TAGA CGAG AAGCGCAGCCAGCCC Tfu_1371 1588881 - 1587523 - | glutamate dehydrogenase TERM 1033 1588895 - 1588951 + r 70 -11.4 -3.32343 | gap 2, overlap 1588896 ATGGTCGCCTCCGGT TCGGGGCGCACCTCGCAGGCACACCCCG GCT CGGGGCGTGCCGG-GAGGAA-GCACCGG TTGTGGCCGTATGGG Tfu_1372 1590536 - 1589064 - | cell envelope-related transcriptional attenuator Tfu_1373 1590736 - 1591818 + | AsnC family transcriptional regulator Tfu_1374 1592911 - 1592216 - | GntR family transcriptional regulator TERM 1034 1592719 - 1592697 - G 77 -3.3 -4.69053 | gap 1, overlap 1592699 GACGAGCGAACAAAA GTG-CCCGCC CCTT GGCGGATCTC CAACAGGCCGGTGTG Tfu_1375 1593041 - 1594255 + | putative integral membrane transporter Tfu_1376 1595588 - 1594275 - | hypothetical protein TERM 1035 1595189 - 1595144 - G 83 -4.5 -4.84359 | overlap 1595145 1595147 1595148 CCACCGGCAGAAAAA GGAGGCCGGTCTCGCGGGT GACACGGG AACCGCGAGACCGGCGGGT GGACGTCCGTCCCAC TERM 1036 1595186 - 1595147 - G 79 -15 -3.31915 | overlap 1595145 1595144 1595148 CCGGCAGAAAAAGGA GGCCGGTCTCGCGGGT GACACGGG AACCGCGAGACCGGCG GGTGGACGTCCGTCC TERM 1037 1595185 - 1595148 - G 79 -18.5 -2.58667 | overlap 1595147 1595145 1595144 CGGCAGAAAAAGGAG GCCGGTCTCGCGGGT GACACGGG AACCGCGAGACCGGC GGGTGGACGTCCGTC Tfu_1377 1596965 - 1595676 - | isocitrate lyase TERM 1038 1596572 - 1596585 + g 71 -9.5 -3.71848 | AGGAGATCTGGTCTG CGCGC AGCA GCGCG TTGTTGATCCGCCGC TERM 1039 1597681 - 1597659 - g 82 -6.8 -4.70659 | overlap 1597672 CCCGAGATCGAAAAA GCCGCGCGGG AAA CCCTCGAAGC CGTCGGCTACCAAGG Tfu_1378 1597173 - 1598618 + | helix-hairpin-helix DNA-binding motif-containing protein TERM 1040 1598685 - 1598641 - f 77 -15.1 -2.87211 | gap 1, opp_overlap 1598646, overlap 1598627 1598628 1598644 ACCCGGCCGGATACA GCAGCCAGGGGTGGTTCCGG GACCCG CCGGAACCACCCCTGTTT-C ATGACCCCGCTAACA TERM 1041 1598683 - 1598644 - f 84 -17.9 -2.69151 | opp_overlap 1598646, overlap 1598627 1598628 1598641 CGGCCGGATACAGCA GCCAGGGGTGGTTCCGG GACCCG CCGGAACCACCCCTGTT TCATGACCCCGCTAA TERM 1042 1598646 - 1598681 + F 100 -24.9 -3.72695 | opp_overlap 1598627 1598628 1598644 1598641 GCCGGATACAGCAGC CAGGGGTGGTTCCGG GACCCG CCGGAACCACCCCTG TTTCATGACCCCGCT TERM 1043 1599299 - 1599262 - g 77 -14.7 -3.21416 | GACCTGGATCACCAA CGGCGGCATCGCCGACG TCCA CGTCGTCGTCGCCTCCG TCGACCCGGAACTCG Tfu_1379 1598753 - 1599982 + | putative acyl-CoA dehydrogenase TERM 1044 1600112 - 1600155 + T 100 -23.2 -4.7497 | opp_overlap 1600142, overlap 1600137 1600140 TGTCGCCGGTGCTGT GCCGCCTGTGGCGGATTTTC TCAG GGAACACCGCCACAGGCGGC TTTTTGCTGCATGAG TERM 1045 1600304 - 1600284 - T 78 -7.5 -4.371 | opp_overlap 1600284 1600286 1600300, overlap 1600300 CGCAGCACAGGAAAA GAGCCCTTC GAA GAGAGGCTC TTGACTAGCCGATTT Tfu_1380 1601194 - 1600619 - | hypothetical protein TERM 1046 1600728 - 1600711 - G 83 -12.7 -4.09685 | overlap 1600715 GGTCATGCTCCAAAA CCCAGGC GGCG GCCTGGG CAGCCCGTCCAGTGA Tfu_1381 1601780 - 1602496 + | hypothetical protein TERM 1047 1603649 - 1603659 + G 70 -3.2 -4.46212 | overlap 1603636 CAGGCCGCTGCCGTG CTGG TGG TCAG TTTTGTCCTCACCGC Tfu_1382 1602587 - 1603714 + | hypothetical protein TERM 1048 1603998 - 1603983 - g 78 -6 -4.56597 | overlap 1603985 CGGGTGCGGGAAAAA CTGCGG GAGC CCGCCG AACTGCGTCCGCGGG Tfu_1383 1603719 - 1604357 + | putative transcriptional regulatory protein Tfu_1384 1604410 - 1604808 + | regulatory protein, MerR Tfu_1385 1604808 - 1605791 + | putative oxidoreductase TERM 1049 1605987 - 1606006 + F 78 -12.8 -3.52539 | TTTCCAGCAGTGGTG GCGCCGCT GGTA GGCGGCGC TTCTGGTTCGCATTC TERM 1050 1606033 - 1606054 + F 95 -13 -4.27117 | ATTCCTGAGACCTGG CGACCGCC CGGACC GGCGGTCG TTTCTGTTGTCCGCG Tfu_1386 1606116 - 1608296 + | anthranilate synthase Tfu_1387 1608486 - 1609295 + | thymidylate synthase complementing protein ThyX Tfu_1388 1610115 - 1609306 - | hypothetical protein Tfu_1389 1610243 - 1612042 + | carbon starvation-induced protein Tfu_1390 1612039 - 1612317 + | hypothetical protein TERM 1051 1612935 - 1612889 - g 79 -15.2 -3.28712 | TCCCGTGGTGGAGAA GCTG-CGGGCC-CGGCAGCGCCGC TTG GCGGCG--GCCGCGGCCCGACTGC GCACTGACGCGGCCG Tfu_1391 1612308 - 1613213 + | arsenite-transporting ATPase TERM 1052 1613216 - 1613264 + F 100 -23.9 -2.87564 | gap 1, opp_overlap 1613203 1613202 ACCCGGCCCGTGACG TGCCGCCTCGCCAGGGCGGCCC TGTGGC GGGCGGCAC-GGCGAGGCGGCA TGTGTCCGACGCTAC Tfu_1392 1613396 - 1614043 + | hypothetical protein Tfu_1393 1614139 - 1614807 + | CDP-diacylglycerol-phosphatidylglycerol phosphatidyltransferase Tfu_1394 1614959 - 1617457 + | mannose-1-phosphate guanylyltransferase / phosphomannomutase TERM 1053 1617458 - 1617515 + F 93 -20.6 -2.76671 | gap 2, overlap 1617458 CGAGCCGAGGGTTGA TCC-CGTG-ACCGGGCGCGCGGCCGGGG ACAC CCTCGACCGCGCGCCCGGCGTATGCGGA GTTTGAAATCGGTCT TERM 1054 1617458 - 1617516 + F 87 -14.6 -3.61654 | gap 3, overlap 1617458 CGAGCCGAGGGTTGA -TCC-CGTG-ACCGGGCGCGCGGCCGGGG ACAC CCTCGACCGCGCGCCCGGCGTATGCGGAG TTTGAAATCGGTCTG Tfu_1395 1617765 - 1618301 + | forkhead-associated Tfu_1396 1618540 - 1619010 + | hypothetical protein Tfu_1397 1619024 - 1619818 + | regulatory protein, MerR Tfu_1398 1620108 - 1622981 + | glycine dehydrogenase TERM 1055 1623483 - 1623455 - g 71 -2.3 -4.56597 | gap 1, overlap 1623458 1623459 1623460 CTGCTGTGCGAAAAA GAAGGGGACGGC GACGCG GCCG-CCCGTGC CTGGCAGACCGTGGT TERM 1056 1623478 - 1623458 - g 72 -4.5 -4.40561 | overlap 1623455 1623459 1623460 CTGTGCGAAAAAGAA GGGGACGGC GAC GCGGCCGCC CGTGCCTGGCAGACC Tfu_1399 1623152 - 1624255 + | hypothetical protein Tfu_1400 1624975 - 1624280 - | endonuclease V Tfu_1401 1625579 - 1625013 - | hypothetical protein Tfu_1402 1625742 - 1626965 + | putative two-component system sensor kinase TERM 1057 1627258 - 1627278 + G 72 -4.5 -4.46212 | overlap 1627259 GTACGTGTTCGGGGC GCTGCGGGC GGG GGCCGCGGG TTTTCTGCTGAAAGA Tfu_1403 1626986 - 1627630 + | LuxR response regulator receiver Tfu_1404 1628339 - 1627656 - | hypothetical protein Tfu_1405 1628456 - 1628851 + | hypothetical protein Tfu_1406 1628865 - 1629239 + | GntR family transcriptional regulator Tfu_1407 1630827 - 1629511 - | RNA polymerase sigma factor Tfu_1408 1632275 - 1631100 - | putative ortho-succinylbenzoate-CoA synthetase Tfu_1409 1632368 - 1633207 + | naphthoate synthase Tfu_1410 1633204 - 1634157 + | O-succinylbenzoate synthase Tfu_1411 1634379 - 1636040 + | 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase TERM 1058 1636228 - 1636218 - f 80 -8.2 -4.3739 | CAGCCGGGTAGAAAA GGCG AGA CGCC GACCAGGGAAGGAGA TERM 1059 1636278 - 1636264 - g 77 -11.4 -3.91897 | TGTCGGACCGAGAAA CCGTGC CGG GCACGG TCGTGGTCGGAGTGG TERM 1060 1636479 - 1636461 - g 85 -11 -4.3534 | overlap 1636476 1636477 TCTCAAGCAGCAAAA GCGCTCCT TGA AGAAGCGC TGCGGCGCGTCCAGG Tfu_1412 1636248 - 1637165 + | hypothetical protein Tfu_1413 1638424 - 1637201 - | isochorismate synthase Tfu_1414 1638598 - 1640220 + | FenI protein Tfu_1415 1640362 - 1640652 + | hypothetical protein Tfu_1416 1642767 - 1640698 - | putative secreted penicillin binding protein Tfu_1417 1643569 - 1642865 - | phospholipid/glycerol acyltransferase TERM 1061 1643344 - 1643372 + g 71 -2.9 -4.59773 | overlap 1643348 GGGTGAAGAGCCGCT GGGCCAGGTTGCC TTC GGCGAACAGCTCC TTTTTCGCGATGAAG Tfu_1418 1643749 - 1644417 + | hypothetical protein Tfu_1419 1645791 - 1644490 - | hypothetical protein TERM 1062 1645897 - 1645854 - R 93 -19.6 -2.87564 | gap 1, opp_overlap 1645856 1645860 1645890 1645892 GGATTCCTGTAGACA GGCCGCGGCGGCCGAAG-CCA GCC TGGTCTTCGGCCGCCGCACAC AGCTCACTGCGTGCT Tfu_1420 1646469 - 1645915 - | hypothetical protein TERM 1063 1646444 - 1646434 - G 72 -8.2 -4.10161 | opp_overlap 1646434 CAGCACGCCCGAAAA CCCG GAA CGGG TTTTGGTGTCCAACG TERM 1064 1646434 - 1646444 + g 78 -8.2 -4.34402 | opp_overlap 1646434 CAGCACGCCCGAAAA CCCG GAA CGGG TTTTGGTGTCCAACG TERM 1065 1646816 - 1646790 - g 75 -10.1 -4.07568 | gap 1, overlap 1646753 1646754 CCGTCTGCCGGAAAA CCCG-CCCAGCC AGCA GACCGGGGCGGG GTGCAACCTTTCCGG Tfu_1421 1646649 - 1647131 + | hypothetical protein Tfu_1423 1649002 - 1647983 - | LysR family transcriptional regulator Tfu_1422 1647128 - 1648054 + | LysR family transcriptional regulator TERM 1066 1648134 - 1648082 - GT 76 -9.9 -4.07568 | CGCCCCCTCGGAAAA CCCACTCG--CCACCGGGTCCAGCACG TGG CGGGC-AG-CCCGGTGGATCGCGTGGG CGACGACGTGCAGCG TERM 1067 1649018 - 1649062 + Tr 93 -17.2 -3.31144 | gap 1, opp_overlap 1649018 1649021, overlap 1649021 CCTTCAACCGTAGAA GAAGGCGTGCGCAAGG-CGGA ATGT TTCGACCCCGCGCACGCCTTC TTCTACGGATGAAAG TERM 1068 1649062 - 1649018 - TR 100 -23.7 -3.36492 | opp_overlap 1649018 1649021, overlap 1649021 CCTTCAACCGTAGAA GAAGGCGTGCGCAAGGCGGAA TGT TTCGACCCCGCGCACGCCTTC TTCTACGGATGAAAG TERM 1069 1649021 - 1649059 + Tr 84 -13.1 -3.79906 | gap 1, opp_overlap 1649021 1649018, overlap 1649018 TCAACCGTAGAAGAA GGCGTGCGCAAGG-CGGA ATGT TTCGACCCCGCGCACGCC TTCTTCTACGGATGA TERM 1070 1649059 - 1649021 - TR 100 -19.6 -3.82191 | opp_overlap 1649018 1649021, overlap 1649018 TCAACCGTAGAAGAA GGCGTGCGCAAGGCGGAA TGT TTCGACCCCGCGCACGCC TTCTTCTACGGATGA TERM 1071 1649153 - 1649103 - TR 71 -7.5 -4.16842 | gap 2, opp_overlap 1649103, overlap 1649104 GCGAGCTGGAAGAAA CGCGC-CCGCAACAGGTTCGAC-AG CGC CTCGTCGAGCCGGCTGAGGAGCGCC GTGTCATCGAGGCGG Tfu_1424 1649446 - 1649081 - | hypothetical protein Tfu_1425 1649882 - 1650874 + | putative integral membrane protein TERM 1072 1650979 - 1650963 - f 76 -9.3 -4.14739 | overlap 1650965 CCACCGAGGCGAAAA CAGCCCG TAG CGGGCAG GGGAGCACGGAGTCA TERM 1073 1650977 - 1650965 - f 71 -10.5 -3.67188 | overlap 1650963 ACCGAGGCGAAAACA GCCCG TAG CGGGC AGGGGAGCACGGAGT TERM 1074 1651672 - 1651656 - g 70 -9.3 -3.83318 | opp_overlap 1651659 GGTCGAAGAAGAGAA CGGGGAG TAC CGCCCCG TGTGGGTGGGCGCCT Tfu_1426 1651048 - 1652847 + | hypothetical protein TERM 1075 1652918 - 1652860 - T 77 -11.8 -3.56092 | gap 4, overlap 1652861 TGAGCAGCCCTCAAA CCGCTTCCGAGGACGACGCCCCGGCTGGGC CCC GCTCAGCCGGGG-GCAG-CC-CGGAAGCA- CGCACGGTGATGTTG TERM 1076 1652918 - 1652861 - T 84 -17.8 -2.73441 | gap 3, overlap 1652860 GAGCAGCCCTCAAAC CGCTTCCGAGGACGACGCCCCGGCTGGGC CCC GCTCAGCCGGGG-GCAG-CC-CGGAAGCA CGCACGGTGATGTTG Tfu_1427 1653547 - 1652855 - | DNA-N1-methyladenine dioxygenase Tfu_1428 1654201 - 1655355 + | magnesium/cobalt transporter CorA TERM 1077 1655358 - 1655412 + F 100 -29.5 -3.53012 | gap 1, overlap 1655344 1655343 1655358 AGGCTGGCTATGAGG C-CCGCCCTTGTCCCGGTGCGGCG ACCCTACG CGCCGCACCGGGACAAGGGCGCCG TTTGCAGGAGAACAC TERM 1078 1655358 - 1655411 + F 100 -29.7 -2.71712 | overlap 1655344 1655343 1655358 AGGCTGGCTATGAGG CCCGCCCTTGTCCCGGTGCGGCG ACCCTACG CGCCGCACCGGGACAAGGGCGCC GTTTGCAGGAGAACA Tfu_1429 1655919 - 1656314 + | anti-sigma factor antagonist Tfu_1430 1656991 - 1656419 - | putative ATP/GTP-binding protein Tfu_1431 1657362 - 1657006 - | hypothetical protein Tfu_1432 1657817 - 1657368 - | hypothetical protein Tfu_1433 1660201 - 1657814 - | ATP-binding region, ATPase-like TERM 1079 1659027 - 1659040 + g 81 -3.8 -4.82901 | overlap 1659018 ATGGGGGGAGCGTCG GTGG CCACGT CCAC TTTTTCTCCGGCGCG TERM 1080 1661267 - 1661299 + G 74 -12 -3.59979 | gap 1, opp_overlap 1661253 ACTGGACCGGGCCGG TCAGCTCCGGTGGGG CACT CCCCGCCGC-GCTGA TTTGGCCTCCGGGGC TERM 1081 1661589 - 1661616 + G 74 -15.6 -3.01712 | opp_overlap 1661607 GATACGGGGGAGCGG GCAGCGGGGG CCGCAGAA CCCCCGCTGC TGTTGACCCCGCAGC Tfu_1434 1660554 - 1661690 + | ABC transporter solute-binding protein Tfu_1435 1662558 - 1661731 - | putative integral membrane protein Tfu_1436 1663481 - 1662555 - | ABC-type multidrug transport system ATPase component Tfu_1437 1663574 - 1664515 + | band 7 protein Tfu_1438 1664527 - 1664757 + | hypothetical protein TERM 1082 1664763 - 1664816 + F 100 -23.9 -3.53012 | opp_overlap 1664767, overlap 1664768 CCCTTCCTAACCCTC AACACTGCGGTGGTGCCGTGCCAGG CATG CCTGGCACGGCACCACCGCATTCCC TTTGGAGCGCCGGAC TERM 1083 1664812 - 1664767 - f 100 -33.5 -3.06261 | opp_overlap 1664763 1664768 TCCTAACCCTCAACA CTGCGGTGGTGCCGTGCCAGG CATG CCTGGCACGGCACCACCGCAT TCCCTTTGGAGCGCC TERM 1084 1664768 - 1664811 + F 100 -37 -3.27525 | opp_overlap 1664767, overlap 1664763 CCTAACCCTCAACAC TGCGGTGGTGCCGTGCCAGG CATG CCTGGCACGGCACCACCGCA TTCCCTTTGGAGCGC TERM 1085 1665143 - 1665125 - f 82 -3.8 -5.00616 | TTCGGTGTGAAAAAA CCCTCC TGTCCGC GAAGGG TGCCCCGGATTAAAG Tfu_1439 1665360 - 1665893 + | hypothetical protein Tfu_1440 1666098 - 1667786 + | helicase, C-terminal:DEAD/DEAH box helicase, N-terminal TERM 1086 1667870 - 1667830 - f 81 -9.7 -4.26903 | gap 2, opp_overlap 1667869 1667869 CGCAGGTGACGAAAA GTGGC-CG-TGGGCCTGGG TGCAT CCCAGGCCCACCGTGCTGC CCCGCACCGGAAACG Tfu_1441 1668194 - 1670194 + | pyrrolo-quinoline quinone TERM 1087 1670466 - 1670485 + F 84 -8.6 -4.56597 | CTAGAACACCATTCT CCGAAGAG CGTT CTTTTCGG TTTTTCGCCAACAAA Tfu_1442 1670634 - 1671209 + | hypothetical protein TERM 1088 1671210 - 1671196 - f 82 -5.6 -4.72272 | overlap 1671204 1671205 CCGGGGGACCAAAAA CCGAGG AAT CCTAGG CCGCCTCGGGAAAGA Tfu_1443 1671332 - 1671736 + | hypothetical protein TERM 1089 1671873 - 1671825 - T 100 -28.2 -2.72344 | opp_overlap 1671830 1671830, overlap 1671830 CCCCAGGCCCAACCA CGACAGCGCCGCTCCGGGGCAC TTCCT GGGCTCCGGAACGGCGCTGTCG TCGCGGTAGGAGAGC TERM 1090 1671868 - 1671830 - T 93 -19.5 -2.86164 | opp_overlap 1671830 1671830, overlap 1671825 GGCCCAACCACGACA GCGCCGCTCCGGGGCAC TTCCT GGGCTCCGGAACGGCGC TGTCGTCGCGGTAGG TERM 1091 1671830 - 1671868 + T 93 -19.5 -2.79183 | opp_overlap 1671825 1671830, overlap 1671830 GGCCCAACCACGACA GCGCCGCTCCGGGGCAC TTCCT GGGCTCCGGAACGGCGC TGTCGTCGCGGTAGG TERM 1092 1671920 - 1671887 - T 93 -20.4 -2.78384 | gap 1, opp_overlap 1671882 CGTCGCGGTAGGAGA GCGGAGCGGTGCCCT GGAGG AGGGCACCGC-CCGC CCAGGCTATTCGAGC Tfu_1444 1673263 - 1671926 - | hypothetical protein Tfu_1445 1673697 - 1673347 - | hypothetical protein TERM 1093 1674037 - 1674025 - R 76 -2.7 -4.88407 | GCAGCCAATCAAAAA TCTAC AAC GTAAA GCTGGGGGTTGTGAA TERM 1094 1674072 - 1674038 - R 86 -13 -3.81741 | AATCTACAACGTAAA GCTGGGGGTTGT GAAGATTACAG ACAACCCCCAGC AACCGCCCACACAAT Tfu_1446 1675198 - 1674200 - | putative transcriptional regulator Tfu_1447 1675256 - 1676245 + | ABC-type multidrug transport system ATPase component Tfu_1448 1676242 - 1677000 + | putative ABC transporter transmembrane protein TERM 1095 1677064 - 1677093 + T 100 -21.5 -2.95521 | overlap 1677059 TGATTATGTCTTCTG CGGTGCCTGGCGG GCTC CCGTCAGGCACCG TGTCCTTGCTGTGGG Tfu_1449 1677371 - 1677171 - | hypothetical protein Tfu_1450 1678224 - 1677406 - | hypothetical protein Tfu_1451 1678550 - 1679458 + | protein tyrosine/serine phosphatase Tfu_1452 1679631 - 1680125 + | hypothetical protein Tfu_1453 1680516 - 1680178 - | hypothetical protein Tfu_1454 1681165 - 1680776 - | hypothetical protein Tfu_1455 1681611 - 1681210 - | hypothetical protein Tfu_1456 1681881 - 1682945 + | FMN oxidoreductase TERM 1096 1683003 - 1682946 - f 100 -24.3 -3.33696 | gap 1, overlap 1682947 1682993 1682995 GCTCGCCTGAACTAA CCCGCCATCCTCTGGTTGGGGAGCAACC CCG AGCCGCTCCCCAACCAGAGGGCGG-GGA CACCCGCAGCCCTCT TERM 1097 1683002 - 1682947 - f 100 -25.6 -2.60075 | gap 1, overlap 1682946 1682993 1682995 CTCGCCTGAACTAAC CCGCCATCCTCTGGTTGGGGAGCAACC CCG AGCCGCTCCCCAACCAGAGGGCGG-GG ACACCCGCAGCCCTC TERM 1098 1684145 - 1684127 - g 78 -13.8 -3.63515 | CGCTACTCCGAACAA CGCGCGGA CAC CCCGCGCG GCGGCAGCATCGCCG Tfu_1457 1683107 - 1684441 + | hypothetical protein Tfu_1458 1684503 - 1685975 + | hypothetical protein Tfu_1459 1685972 - 1687066 + | hypothetical protein TERM 1099 1688076 - 1688030 - g 73 -7.1 -4.15044 | gap 1, opp_overlap 1688031, overlap 1688031 CCGGGCTCGAAGAAA TCGC-GGACGCCACCTCCGCAG TGCT CTGCGAAGGCGCCGAACTGCGG GCCCGGCTCGTCCAC Tfu_1460 1687066 - 1689273 + | hypothetical protein Tfu_1461 1689288 - 1690520 + | von Willebrand factor, type A Tfu_1462 1690536 - 1691795 + | acetyl esterase Tfu_1463 1692197 - 1692484 + | hypothetical protein Tfu_1466 1695052 - 1694249 - | short-chain alcohol dehydrogenase Tfu_1467 1695765 - 1695124 - | hypothetical protein TERM 1100 1696681 - 1696710 + G 81 -2.7 -5.00616 | gap 1, overlap 1696683 TACGTCGATCATGTT CGGAGCGCAGCACA CCC TGGGC-GCGGTCGG TTTTTTCGAGGAGCA TERM 1101 1697419 - 1697459 + G 78 -8.2 -4.36914 | gap 1, opp_overlap 1697430, overlap 1697419 GCCGGGGATCACGGT CC-AGCAGCACACCGCGCT GTCC GGCGAGGTGTCCTGCACGG TTTTCTACGACAACG TERM 1102 1697881 - 1697861 - g 73 -12.5 -3.40403 | GCTTTGGGAGCAGAA GTGCCCGGG GTT CCCGGCCAC GGAGTGTTCGAACGG Tfu_1468 1695869 - 1698019 + | Acyl-CoA dehydrogenase Tfu_1469 1698020 - 1699156 + | hypothetical protein Tfu_1470 1699677 - 1699216 - | hypothetical protein Tfu_1471 1699811 - 1701283 + | betaine-aldehyde dehydrogenase Tfu_1472 1701298 - 1702146 + | short-chain dehydrogenase/reductase (SDR) family protein Tfu_1473 1702143 - 1704293 + | putative pimeloyl-CoA synthetase Tfu_1474 1704287 - 1705075 + | short chain dehydrogenase TERM 1103 1705401 - 1705380 - g 77 -11.5 -3.9281 | opp_overlap 1705380 ACGACGTGGAAACAA GGGTGCCGC CACT GCGGCATCC TGTCTCGCCCTCGGC Tfu_1475 1705357 - 1706652 + | TRAP-type C4-dicarboxylate transport system periplasmic component Tfu_1476 1706740 - 1707276 + | hypothetical protein TERM 1104 1707383 - 1707373 - g 70 -8.2 -3.94 | GGAACGGTGAAAGAA GGCC GCC GGCC GTGGATCGTGGCCGC Tfu_1477 1707289 - 1708809 + | TRAP dicarboxylate family transporter DctM subunit TERM 1105 1709290 - 1709310 + G 74 -11.1 -3.7282 | CTCGCCCTGCTCGGG CTCCCCGTC AGC GACGGCGAG TTCTTCCTGCCCTGG TERM 1106 1709321 - 1709346 + G 70 -8.3 -3.90744 | gap 1 GCGAGTTCTTCCTGC CCTGGTCGGAGA CGG TCTTCG-CCGGG TTCTTTGGGGAAGAC Tfu_1478 1708822 - 1710033 + | hypothetical protein Tfu_1479 1710039 - 1710254 + | putative ferredoxin TERM 1107 1710359 - 1710411 + G 89 -18.4 -3.29461 | gap 1, overlap 1710361 AACCCCTCACCGGGT CCTCGGCGCGGTCAGCCCCGCCG ACCGCACA CGGCGGGGCCGGCC-CGTCGATG TTCTGGGAGACGTTC TERM 1108 1710361 - 1710409 + G 90 -19.6 -3.21395 | gap 1, overlap 1710359 CCCCTCACCGGGTCC TCGGCGCGGTCAGCCCCGCCG ACCGCACA CGGCGGGGCCGGCC-CGTCGA TGTTCTGGGAGACGT Tfu_1480 1710247 - 1711476 + | family III CoA-transferase subunit TERM 1109 1711748 - 1711711 - g 82 -11.1 -4.19238 | overlap 1711712 CCGTCAACCTGAAAA CCGAGGCGGGCCGCGGA GTCG TCCGCGACCTGGCCCGC TGGGCCGACGTGGTC TERM 1110 1711747 - 1711712 - g 77 -14.6 -3.11222 | overlap 1711711 CGTCAACCTGAAAAC CGAGGCGGGCCGCGGA GTCG TCCGCGACCTGGCCCG CTGGGCCGACGTGGT Tfu_1481 1711473 - 1712693 + | putative subunit of succinyl-CoA:benzylsuccinate CoA-transferase Tfu_1482 1712690 - 1713286 + | hypothetical protein Tfu_1483 1713279 - 1713737 + | hypothetical protein Tfu_1484 1713734 - 1714903 + | hypothetical protein Tfu_1485 1714921 - 1715325 + | hypothetical protein Tfu_1486 1715381 - 1716676 + | TRAP-type C4-dicarboxylate transport system periplasmic component TERM 1111 1716731 - 1716771 + T 93 -17.6 -3.42809 | gap 1, opp_overlap 1716732, overlap 1716732 CTAACGGGGAGGAGA ACC-GCGGTGGGGCACTGC GACC GCAGTGCCCCACCGGAGGG TTGGTTAGTGGTCTT TERM 1112 1716732 - 1716770 + T 100 -21.1 -2.64962 | gap 1, opp_overlap 1716732, overlap 1716731 TAACGGGGAGGAGAA CC-GCGGTGGGGCACTGC GACC GCAGTGCCCCACCGGAGG GTTGGTTAGTGGTCT TERM 1113 1716769 - 1716732 - T 100 -23.5 -3.41527 | opp_overlap 1716732 1716731 TAACGGGGAGGAGAA CCGCGGTGGGGCACTGC GACC GCAGTGCCCCACCGGAG GGTTGGTTAGTGGTC Tfu_1487 1717693 - 1716776 - | putative lipase/esterase TERM 1114 1717707 - 1717736 + H 93 -3.5 -5.33866 | gap 1, overlap 1717698 1717709 ATTGAGCCTCCGCTA GCGGGGGTTTCGGT AGC ACC-AAGCCACCAC TTTTTTCTCAATTTC TERM 1115 1717749 - 1717771 + H 70 -5 -4.38154 | CACTTTTTTCTCAAT TTCATAATAA TAG TAATTATGAA TTTTATCACAAATCT Tfu_1488 1717824 - 1719794 + | NADH:flavin oxidoreductase TERM 1116 1720160 - 1720108 - g 100 -21.5 -4.3739 | gap 4, opp_overlap 1720157, overlap 1720109 GAGCGGGGCAGAAAA CCACTGTCCACACGCCCGGGCGGCAGG CAT CCTGCCGCCCGGGC-TG-GG-C-GCGG ACGGCGCACTTGCCG TERM 1117 1720166 - 1720109 - g 93 -21.4 -3.22113 | gap 3, opp_overlap 1720157 1720160, overlap 1720108 AGCGGGGCAGAAAAC CACTGTCCACAC---GCCCGGGCGGCAGG CAT CCTGCCGCCCGGGCTGGGCGCGGACGGCG CACTTGCCGACTACC Tfu_1489 1719803 - 1720885 + | oxidoreductase TERM 1118 1720930 - 1720874 - T 71 -10 -3.62046 | gap 1, overlap 1720876 GCATGCGCGGAAGAA CAGCGGGGGTGACGAGGCA-GACCGGC ACCG GCCTGCAGTGCCCGGTCACCCCTGCCA GGGAGGAACAGTGTG TERM 1119 1720928 - 1720876 - T 73 -12.6 -3.38991 | gap 1, overlap 1720874 ATGCGCGGAAGAACA GCGGGGGTGACGAGGCA-GACCGGC ACCG GCCTGCAGTGCCCGGTCACCCCTGC CAGGGAGGAACAGTG TERM 1120 1720999 - 1720959 - T 100 -28.3 -2.98823 | TGCTCGCTAGAGACA GGCGCCGCCTCCTGCCGTG CTG CCTGGCAGGAGGCGGCGCC CACCACCGCAGACGC TERM 1121 1721125 - 1721068 - T 71 -13.9 -2.70932 | gap 1 GGGCCCGGGGAAGGA CGCGCCAGCCTGCGCGGAGCGCGGGGAC AGG GATCCCGCGC-CCGGACAGTCCAGGGCG CACCTTGGGCGCGCC Tfu_1490 1722938 - 1721310 - | putative monooxygenase TERM 1122 1723672 - 1723616 - g 77 -4.4 -4.69664 | overlap 1723617 GAGATCACCGAAAAA CCCGAGCG-GATCGTCACCCTGGGCCAA GGA TCAGCCGAAACCG-CGATCGCGCTCGGC ACCGTCCCCGTGGGT Tfu_1491 1723427 - 1724470 + | putative ABC transporter, periplasmic iron-siderophore binding protein TERM 1123 1724506 - 1724474 - f 93 -20.6 -2.72344 | CTCGACCGCTAACCA CCAGGGTGCGGCCC TGCTG GGGCCGCACCCTGC TCCCTGATCCCATGG Tfu_1492 1724518 - 1725549 + | putative ferrichrome transport system permease protein Tfu_1493 1725546 - 1726586 + | putative ferrichrome transport system permease protein Tfu_1494 1726583 - 1727482 + | ABC-type cobalamin/Fe3+-siderophores transport systems ATPase components Tfu_1495 1728656 - 1727445 - | hypothetical protein Tfu_1496 1730018 - 1728765 - | FMNH2-dependent monooxygenase Tfu_1497 1731266 - 1730109 - | alkanesulfonate monooxygenase TERM 1124 1730870 - 1730880 + g 78 -6.8 -4.56597 | overlap 1730837 1730835 AGGGTTCGCCGAGCG CGAG GAA CTCG TTTTTCAGCCAGCCG Tfu_1498 1731920 - 1731396 - | putative flavin-dependent reductase Tfu_1499 1732500 - 1731958 - | hypothetical protein Tfu_1500 1733687 - 1732521 - | alkanesulfonate monooxygenase Tfu_1501 1734367 - 1733747 - | response regulator TERM 1125 1734578 - 1734564 - H 82 -5.6 -4.7373 | TCACCCCAGGAAAAA CGCGGT GTC AACGCG CGATGAGGCCCCTGT Tfu_1502 1734752 - 1735846 + | alkanesulfonate monooxygenase Tfu_1503 1735843 - 1736709 + | taurine ABC transporter, permease protein Tfu_1504 1736746 - 1737795 + | extracellular solute-binding protein Tfu_1505 1737779 - 1738567 + | ABC-type nitrate/sulfonate/bicarbonate transport system ATPase component TERM 1126 1738642 - 1738590 - f 74 -4.6 -4.58424 | gap 1, overlap 1738592 1738593 CACGAGCAGAGAAAA CACCCGCGCACCGG-GGAGAGCGCA CGAC CGCGCCGGGAACCGATGTGCGGGTG CAACCTTTCCGGCGT Tfu_1506 1738634 - 1739224 + | DNA-directed RNA polymerase specialized sigma subunit sigma24 -like protein Tfu_1507 1739217 - 1739999 + | methylated-DNA-(protein)-cysteine S-methyltransferase Tfu_1508 1740393 - 1741649 + | hypothetical protein Tfu_1509 1741730 - 1742338 + | hypothetical protein Tfu_1510 1743122 - 1742373 - | phosphoglycolate phosphatase TERM 1127 1742614 - 1742586 - G 77 -15.2 -3.23274 | overlap 1742581 GCTCGCAGAATCGAA CGGCCCGTGCCG TTCCC CGGCCCGGGCCA TCGCCCAACGCACCA Tfu_1511 1743762 - 1743226 - | regulatory protein, MerR Tfu_1512 1745038 - 1743890 - | putative acyl-CoA dehydrogenase Tfu_1513 1745615 - 1745253 - | biotin carboxyl carrier protein TERM 1128 1746793 - 1746762 - g 76 -13.8 -3.44146 | gap 1, opp_overlap 1746760 1746771 GCGCGCTACAACCAA GCGGCGA-CACTGCT GGA AGCAGTGCTCTCCGC AGTGGTTCCCGCTCT Tfu_1514 1745730 - 1747247 + | serine/threonine protein kinase Tfu_1515 1747600 - 1747295 - | hypothetical protein Tfu_1516 1748263 - 1747886 - | hypothetical protein TERM 1129 1748400 - 1748410 + H 89 -5.4 -5.20781 | GGTTCCGCGCTACCC GATG ACA CATC TTTTCTTTTGTGCTG Tfu_1517 1748615 - 1748971 + | hypothetical protein Tfu_1518 1750633 - 1749227 - | xanthine/uracil permease Tfu_1519 1751803 - 1751078 - | hypothetical protein TERM 1130 1753084 - 1753100 + G 70 -12.3 -3.34398 | overlap 1753082 GGGGTATGCGCCGGT GCTTGCG TTG CGCAAGC TGTTTGAGCAGACGG Tfu_1520 1752203 - 1753384 + | thiolase TERM 1131 1753402 - 1753437 + F 100 -14 -4.99638 | GTTCGTTCGTGGATG CGCGGGTCTGCGGT GGGGTTTG GCTGCAGGCCCGCG TTTTTGTCTGGGTGT Tfu_1521 1753414 - 1753851 + | glutaredoxin family protein TERM 1132 1754053 - 1754082 + G 93 -8.5 -5.18371 | gap 1 CGTACGCTTTCCGTT CTCCGGTTCGTCTC CTC GCG-CGGACCGGGG TTTTCTTTTGTGGGC TERM 1133 1754409 - 1754442 + G 86 -3.1 -5.10767 | gap 1, overlap 1754399 1754410 1754411 CAGGGGGCCATGGTG TTGGC-CTGTTATGCC CTG GGTATGGCAGCGCCGC TTTTTGTGTTGGCTG Tfu_1522 1753950 - 1754807 + | cytochrome c biogenesis protein Tfu_1523 1754997 - 1755836 + | protein-disulfide isomerase Tfu_1524 1756183 - 1755848 - | hypothetical protein Tfu_1525 1756274 - 1756813 + | hypothetical protein TERM 1134 1757683 - 1757696 + GF 79 -2.3 -4.83169 | overlap 1757683 GACCGGTTTATTGCT GAGGC GGCC GCCTG TTTTTCTGGGGAGAT Tfu_1526 1756834 - 1757790 + | ribonuclease Z Tfu_1527 1757765 - 1758466 + | rare lipoprotein A Tfu_1528 1758623 - 1759084 + | heat shock protein Hsp20 TERM 1135 1759096 - 1759140 + F 100 -19.4 -3.37245 | gap 1 CTGACCTGTTCTCGC CAGGGCTGTCG-CGTTCCTCC TGTC GTGGGGACGGCGACAGCCCTG TTCGTCTTCGGCTGC TERM 1136 1760575 - 1760556 - g 78 -6.4 -4.63486 | gap 1, opp_overlap 1760556 ATGTGGTGAAGAAAA GCGTGCGGG TGT CCCA-ACGC TCCTATGCGTTGTCG TERM 1137 1761792 - 1761764 - g 84 -16.1 -3.53012 | GTGCCGTGTGCGAAA CGCCCATCAGGAG TGT CTCCTGATAGACG TGTGCCGTGGGAGCA Tfu_1529 1759226 - 1762753 + | hypothetical protein TERM 1138 1762913 - 1762877 - T 100 -22.3 -4.03234 | overlap 1762878 CCCCTGGCAGAGAAA GGTGGGGGGTGGACACG TGC CGTGTCCACCCCCCTAC GAGGGTGTGCGGCTA TERM 1139 1762913 - 1762878 - T 100 -24.2 -3.01726 | gap 1, overlap 1762877 CCCTGGCAGAGAAAG GT-GGGGGGTGGACACG TGC CGTGTCCACCCCCCTAC GAGGGTGTGCGGCTA Tfu_1530 1768475 - 1762926 - | Acetyl/propionyl-CoA carboxylase alpha subunit TERM 1140 1763025 - 1763063 + g 72 -3.6 -4.65895 | overlap 1763026 CACCGCGCGTTGAAT GTCGTGGATGCGGTCGAA CTC TGCGGCCACTTCCCCGAG TTTTTCGGTGCGGAC TERM 1141 1763720 - 1763738 + g 75 -8.8 -4.1822 | AGACCGCGCGCATGA CCGTGCGA ATG TCGAACGG TTTCTTACGGTCCGG TERM 1142 1764415 - 1764473 + g 78 -13.7 -3.54424 | CGGGTCACCCCTTGC GGGTGCAGCGCGGTGGGGGTGGTGACC ACGCC GACCACCATGCCCGCCGTGTTGCGGCC TTTCGGCCGGTCCAC TERM 1143 1764568 - 1764593 + g 70 -8.3 -3.88291 | gap 1 TCGTAAGGGTAGACG GTGTTGCG-GCT GCT GGCACGCAGCAC TTTCTGCCGGTAGTC TERM 1144 1766488 - 1766515 + g 72 -4.9 -4.39386 | gap 1, overlap 1766493 TTTTTGACGCGGGCT TTGAA-CGGTGC GCGCA GCACCGTTTCCA TTTTCATGCTTTCCA TERM 1145 1766493 - 1766509 + g 70 -9.4 -3.94846 | overlap 1766488 GACGCGGGCTTTGAA CGGTGC GCGCA GCACCG TTTCCATTTTCATGC TERM 1146 1767378 - 1767401 + g 74 -12.4 -3.53811 | GATGGCATGCCCCTG CTCGATGGGG GGTT CCCCTTCGAG TTTGCCGCCGCTGGC TERM 1147 1767864 - 1767890 + g 71 -11.5 -3.57144 | gap 1, overlap 1767871 GGTGATGATGCGGAT GCCG-CGCCCGC CCCC GCCGGCGGCGGC TTTCAGCATCAGCGG TERM 1148 1768566 - 1768528 - R 100 -14.6 -5.04356 | gap 1 GGAAACAACCAAAAA CCCCGCCGC-GGCCC GGGGGGGGGG GAGCCTGCGGCGGGG TGCGGGTGGTCGATG Tfu_1531 1769101 - 1768586 - | hypothetical protein TERM 1149 1769273 - 1769285 + H 81 -9.1 -4.30719 | opp_overlap 1769271 1769269 CAACCGCAAGACACC CACGC CCC GCGTG TTTGTTGTGGCCGGA Tfu_1532 1769309 - 1769749 + | hypothetical protein TERM 1150 1770606 - 1770623 + G 75 -8.3 -4.14511 | AGCGCTCGTGTTGGA CCGGGGC ACCC GCCGCGG TTTTCGGGTGCGGTT Tfu_1533 1769962 - 1771479 + | hypothetical protein Tfu_1534 1772097 - 1771564 - | hypothetical protein TERM 1151 1771862 - 1771842 - G 83 -12.5 -4.07687 | opp_overlap 1771842 ACTTCGGCTGCAAAA CGTGGGCGA CTG TCGCCCCCG TTAATACCACTCCCG Tfu_1535 1772257 - 1772670 + | ankyrin Tfu_1536 1773073 - 1773945 + | hypothetical protein Tfu_1537 1774435 - 1773947 - | hypothetical protein Tfu_1538 1774439 - 1774780 + | hypothetical protein Tfu_1539 1775568 - 1774762 - | hypothetical protein Tfu_1540 1776373 - 1775579 - | putative hydrolase Tfu_1541 1777208 - 1776405 - | AP endonuclease TERM 1152 1777353 - 1777318 - R 100 -21.9 -3.68024 | overlap 1777319 GCGGGGAATACACAA CGGTGGGCGAGCCGC CCCCAC GCGGCCCGCCCACCA GACCATCCCCGCCTC TERM 1153 1777352 - 1777319 - R 100 -23.2 -2.80493 | overlap 1777318 CGGGGAATACACAAC GGTGGGCGAGCCGC CCCCAC GCGGCCCGCCCACC AGACCATCCCCGCCT Tfu_1542 1778704 - 1777367 - | hypothetical protein Tfu_1543 1779426 - 1780289 + | arginase TERM 1154 1780808 - 1780831 + G 77 -3.9 -4.7497 | overlap 1780818 CCTCTCCCACGACTT CCGC-GTCATG CGCG CA-GACCGCGG TTTTTGGTGCCTGCC Tfu_1544 1780470 - 1781141 + | putative enoyl-CoA hydratase/isomerase family protein TERM 1155 1781197 - 1781235 + T 79 -10.4 -4.15841 | gap 1, overlap 1781177 1781198 CAGGCCCCGTTACCC GCCCTGTTGTTGTC-CC ACTCCA GGCGGCAACAACAGGGA TTTCTCGTTTGATGC TERM 1156 1781198 - 1781234 + T 76 -13.9 -3.08782 | gap 1, overlap 1781177 1781197 AGGCCCCGTTACCCG CCCTGTTGTTGTC-CC ACTCCA GGCGGCAACAACAGGG ATTTCTCGTTTGATG Tfu_1545 1782239 - 1781265 - | hypothetical protein TERM 1157 1782300 - 1782316 + H 89 -2.2 -5.40464 | overlap 1782302 GTGAACTACTCCAGG TAGGCA GATCA TGCCAA TTTTTCTTTCTAGTG Tfu_1546 1782417 - 1783949 + | putative acyl-CoA synthetase phhB 1784244 - 1783960 - | pterin-4-alpha-carbinolamine dehydratase TERM 1158 1784439 - 1784456 + r 71 -4.1 -4.58424 | gap 1, overlap 1784441 CTCATCAAGACCGGA CA-GCGTC GTC GGCGCCTG TTTTCTCTACTGGTG Tfu_1548 1785180 - 1784707 - | hypothetical protein TERM 1159 1785001 - 1784953 - G 74 -12.6 -3.61715 | gap 1, overlap 1784954 1784957 GAGGTTCCTCAACAA CTCACCCCGAAGGATCTGG ACTCGATTGCTA CCCGATCCTTCGGGGTG-G TCGCAGGAATGGGCG TERM 1160 1785138 - 1785127 - G 76 -2.2 -4.67353 | overlap 1785128 1785129 GGAGCCAGCGAAAAA CTCG GCAG CGAA TACGCCGCAGTCCGT TERM 1161 1785398 - 1785414 + G 78 -6.5 -4.56597 | GCAGGGCTGCGACTT CGACTTC ACC GGGGTCG TTTTTGACGGCGGCG Tfu_1549 1785219 - 1785662 + | hypothetical protein TERM 1162 1785856 - 1785905 + T 91 -16.6 -3.49102 | gap 2 GGCCCACCCTCACTG CTCGATCCTCAACCGGCCTTGAGC AGGA GC-CA-GGCCGGTTAAGGATCGCG TTGTCTAACCCGTGT Tfu_1550 1787124 - 1785940 - | hypothetical protein TERM 1163 1786093 - 1786076 - G 89 -2.5 -5.26875 | GGTTCAACGAAAAAA GGTCCGC ATTC GCGCGCC TGGTGAGTGTCGAGG TERM 1164 1786580 - 1786566 - G 79 -2.8 -4.87008 | AAGACAGAAAATAAA CAACTG CAG CAATCG AACAGACCGCACCGA TERM 1165 1786837 - 1786849 + g 70 -3.3 -4.43307 | overlap 1786831 TTCGCGCAGCCTTCG CGCCT GGG AGGGG TTCTTTTCTTGAAGG Tfu_1551 1787958 - 1788272 + | hypothetical protein TERM 1166 1788668 - 1788654 - T 72 -8.5 -4.07568 | CTGGGGTTTGGAAAA CCCCG AACCA CGGGG GTTAAGGCGTGTGGG Tfu_1552 1790526 - 1788670 - | PAS:protein phosphatase 2C-like:GAF TERM 1167 1788828 - 1788796 - G 84 -9.8 -4.40804 | overlap 1788798 GAGCAGGTCACAAAA GTCGTCGAGCTCGT GGTGG ACGAGCTCGGCAGC ATGCTGACGCAGCTG TERM 1168 1789118 - 1789104 - G 86 -10 -4.58283 | CAAGCCGCGCAAAAA CCATGG TGG CCATGG AGACTTCACTGATGT Tfu_1553 1791725 - 1790694 - | putative integrase/recombinase Tfu_1554 1792660 - 1792244 - | low molecular weight phosphotyrosine protein phosphatase Tfu_1555 1793735 - 1792647 - | arsenical-resistance protein ACR3 Tfu_1556 1794109 - 1793732 - | ArsR family transcriptional regulator TERM 1169 1794073 - 1794093 + g 81 -9.7 -4.3255 | overlap 1794063 1794060 GACAGCAGTCTGCGG CTGTGGTTG GCT CAACCCCAG TTTCTTGATTCGACA Tfu_1557 1794187 - 1794618 + | hypothetical protein TERM 1170 1794759 - 1794742 - f 73 -5.5 -4.38712 | gap 1 GTTATGGGGACAAAA GCGGACCC AAG GGG-CCAC ATCCGGTTGACGGTT TERM 1171 1794770 - 1794810 + F 100 -34.3 -5.10461 | GCCACATCCGGTTGA CGGTTTGCTGCTCGTGCGC CTG GCGCACGAGCAGCAAACCG TTTTTCTTCAGTAGG Tfu_1558 1795269 - 1796465 + | hypothetical protein Tfu_1559 1797314 - 1796553 - | putative uvrA-like protein Tfu_1560 1798530 - 1797322 - | putative excision nuclease ABC subunit Tfu_1561 1798945 - 1798652 - | uvrA-like protein Tfu_1562 1799687 - 1799277 - | hypothetical protein TERM 1172 1799531 - 1799541 + g 71 -2.4 -4.60041 | TGAGCCACCCGTCCA CGTG CAC CTCG TTTTTCCGAATCCCT TERM 1173 1800156 - 1800175 + G 71 -2 -4.53303 | GGCGTACAGGATCCC CTAACCAC ACTC GTGGAAAG TTTTCTATGCGACTG Tfu_1563 1800128 - 1800823 + | hypothetical protein TERM 1174 1800828 - 1800885 + T 73 -13.7 -2.80344 | gap 4, opp_overlap 1800872, overlap 1800828 TTCAAAACTAGCCTT C-TCT-AAC--GCGTGTGTGGGGGGCAGG AACT CCTGCCCCCCACACACGCATGCTCAGGCG GTTATTCGATGGGAA Tfu_1564 1802452 - 1800887 - | Outer membrane protein and related peptidoglycan-associated (lipo)proteins TERM 1175 1802413 - 1802399 - G 70 -9.2 -3.92542 | GCCACTCGCAAACAA GCAGCC GCT GGCCGC TAATGCCACAAACGA Tfu_1565 1803966 - 1802695 - | hypothetical protein TERM 1176 1803737 - 1803705 - G 93 -6.2 -5.24129 | gap 1, overlap 1803706 CCGGGGTAGAAAAAA CCGCGC-GCCGCAAC CGCG ACTGCGGCAACGCGT CAAAACGCTCAAACA TERM 1177 1803736 - 1803706 - G 71 -9.7 -3.73995 | gap 1, overlap 1803705 CGGGGTAGAAAAAAC CGCGC-GCCGCAAC CGCG ACTGCGGCAACGCG TCAAAACGCTCAAAC Tfu_1566 1804109 - 1805200 + | putative oxidoreductase Tfu_1567 1805679 - 1806143 + | leucine-rich repeat-containing extensin Tfu_1568 1806532 - 1806101 - | ArsR family transcriptional regulator Tfu_1569 1806617 - 1807588 + | arsenite efflux pump TERM 1178 1808011 - 1808050 + F 100 -25.2 -2.62184 | gap 1 AGACTCTCGCTTGAC GTTGGGGGCCGACGCT-TC GAA GATGGCGTCGGCCCCCAAC TCATATGGAAGGCAG Tfu_1570 1808055 - 1808657 + | hypothetical protein TERM 1179 1808799 - 1808815 + F 83 -2.2 -5.10461 | GCTCCGGTGGGTGTG CCGG GATGCGGGG CCGG TTTTTGTTAAGTCCC Tfu_1571 1808872 - 1809480 + | hypothetical protein Tfu_1572 1810236 - 1811462 + | hypothetical protein Tfu_1573 1811989 - 1811615 - | hypothetical protein Tfu_1574 1812939 - 1812196 - | hypothetical protein TERM 1180 1812657 - 1812688 + g 71 -10.8 -3.66742 | overlap 1812659 1812678 AGTACGTCTCCCGTT CCGTGCCGTCCTCG GCGA TGAGGACCGCACTG TTGTCCTTGTTTCTG TERM 1181 1812659 - 1812686 + g 73 -12 -3.39438 | overlap 1812657 1812678 TACGTCTCCCGTTCC GTGCCGTCCTCG GCGA TGAGGACCGCAC TGTTGTCCTTGTTTC Tfu_1575 1814466 - 1813030 - | putative sugar kinase protein Tfu_1576 1816927 - 1814498 - | hypothetical protein TERM 1182 1815920 - 1815890 - G 79 -11.8 -3.96148 | CTCCCGGACGAGAAA GGCTGCGGAAGGAC CGA GCTCTCCCACAGCC AGCAGACGCGGCGTC TERM 1183 1816815 - 1816797 - G 71 -10.2 -3.78953 | ACCGCGACCATCAAA TCGACCGG CCG CCGGGCGA TGCCCCCCGTGGCAT Tfu_1577 1817081 - 1818388 + | hypothetical protein TERM 1184 1818656 - 1818693 + F 76 -5.7 -4.58395 | gap 3 GGCAGGGCATAAATG CGTCCGGTCACCT-GGTG TTTCT CACCCAGGTG-C-GGGCG TTTTTCAACAGTCCC TERM 1185 1818927 - 1818947 + F 73 -9.7 -3.84825 | overlap 1818922 TCGGATCTACGTGCG CGGAGTCTG GCG CACACTCCG TTTAGTCTCGCTGGG TERM 1186 1820935 - 1820919 - g 81 -7.3 -4.56597 | opp_overlap 1820877, overlap 1820934 GGCTGCCGCCAAAAA CGTTCCT GGA AAGAACG CTCTCGCCGTGAGCT Tfu_1578 1819567 - 1821351 + | CRISPR-associated Cmr2 family protein TERM 1187 1821951 - 1821981 + G 76 -7.5 -4.25104 | gap 1, overlap 1821952 GGATACCTGTACCAC GCCACCCACCTGCG TCCT CGC-GATGGGTGGG TTTTCCTCGCCGAGG Tfu_1579 1821348 - 1822496 + | hypothetical protein Tfu_1580 1822493 - 1823395 + | CRISPR-associated RAMP Cmr4 family protein family protein Tfu_1581 1823388 - 1823867 + | hypothetical protein Tfu_1582 1823864 - 1824865 + | CRISPR-associated RAMP Cmr6 family protein Tfu_1583 1825225 - 1826460 + | CRISPR-associated RAMP Cmr1 family protein TERM 1188 1827450 - 1827421 - g 100 -17.1 -3.85698 | CGTGGGGCTCACAAA GGGGGAGTGCGGC CGAT ACCGCGCTCCCCC GGTCCATCCCCACGT TERM 1189 1827878 - 1827854 - g 90 -14.3 -4.08706 | GGCTCACCAGAGAAA GCCCCCCAGAA TGT CTCTGGAGGGC GGTCCATCCCCACGT Tfu_1584 1827003 - 1828058 + | hypothetical protein TERM 1190 1828124 - 1828104 - g 95 -18.3 -3.60296 | CACTGGCATGCGAAA GGCCCTGGC CAT GCCAGGGCC GGTCCATCCCCACGT Tfu_1585 1828081 - 1828344 + | hypothetical protein Tfu_1586 1828447 - 1829103 + | hypothetical protein Tfu_1587 1830374 - 1829376 - | CRISPR-associated Cas1 family protein Tfu_1588 1831065 - 1830367 - | CRISPR-associated Cse3 family protein TERM 1191 1830652 - 1830669 + g 82 -3.3 -5.0133 | overlap 1830627 GGCCCCGCGCAGAGC CCAGGTG TACT CTCTTGG TTTTTTCGGCGGCTC Tfu_1589 1831826 - 1831062 - | CRISPR-associated Cas5e family protein Tfu_1590 1832944 - 1831823 - | CRISPR-associated Cse4 family protein TERM 1192 1832286 - 1832303 + g 83 -5.5 -4.87803 | overlap 1832287 1832300 TGGCCCGCGTTCATG TGGCCAC TACC GTGGTCG TTTTCTTTGGGGATG Tfu_1591 1833675 - 1832941 - | hypothetical protein Tfu_1592 1835321 - 1833672 - | CRISPR-associated Cse1 family protein TERM 1193 1835564 - 1835596 + r 76 -5.7 -4.57341 | overlap 1835579 CTAATCCCTTATCTT GAGAATCCCATTC TCTCACT GAATGTGATTTTC TTTTTACGGAGAGTT TERM 1194 1835579 - 1835591 + r 93 -3.4 -5.26119 | overlap 1835564 GAGAATCCCATTCTC TCAC TGAAT GTGA TTTTCTTTTTACGGA Tfu_1593 1838740 - 1835906 - | CRISPR-associated helicase Cas3 family protein protein TERM 1195 1837759 - 1837749 - G 76 -2.4 -4.68103 | opp_overlap 1837754 GGAAGCGCAAGAAAA CGTC CAG GGCG CCCCGTTGCCTTCCC TERM 1196 1838109 - 1838076 - G 84 -10.3 -4.46212 | CGTTCCAGGAGAAAA TCCTCCTGGCTGACC AGCC AGTCAGCAAGGATGA CCAGGCCGCACACGA TERM 1197 1838219 - 1838185 - G 87 -8.4 -4.72272 | opp_overlap 1838194 CCGTCGCATCAAAAA CTGCGTGCAGCAGGGC GTG GCGCTGCTTCTCCCAG TGCGGCGAGGAAAAG TERM 1198 1838259 - 1838234 - G 78 -8.9 -4.25104 | opp_overlap 1838234 GTGCGGCGAGGAAAA GCCGAACTCCG CTAG CGGATTGCGGC TTTGAAAAGAGGGGT Tfu_1595 1839733 - 1839428 - | hypothetical protein Tfu_1596 1840453 - 1839830 - | CRISPR-associated Cse3 family protein TERM 1199 1840035 - 1840058 + g 82 -11 -4.10453 | overlap 1840036 1840041 ACGATCAGTTCGTGT TCGTCGCCTT CGGG AAGGCGACGC TTTTCCGCAGGTTTC TERM 1200 1840036 - 1840057 + g 74 -14.5 -3.0579 | overlap 1840035 1840041 CGATCAGTTCGTGTT CGTCGCCTT CGGG AAGGCGACG CTTTTCCGCAGGTTT TERM 1201 1840041 - 1840069 + g 77 -11.7 -3.89346 | overlap 1840036 1840035 AGTTCGTGTTCGTCG CCTTCGGGAAGGC GAC GCTTTTCCGCAGG TTTCTCCACTACCCG TERM 1202 1840102 - 1840118 + g 100 -2.1 -5.52384 | overlap 1840101 ATCCCGCAGCGTCTT GGCGCTG CAG CAGCCAC TTTTTTTGATAGCGC TERM 1203 1840292 - 1840324 + g 71 -11.9 -3.53811 | GGGTTGGGTTGGCCA CCCGGCCTGCTCCAC GAG GTGGGTCAGGTCAGG TTTGGGCGGGCTGAC Tfu_1597 1841237 - 1840500 - | CRISPR-associated Cas5e family protein Tfu_1598 1842427 - 1841234 - | CRISPR-associated Cse4 family protein TERM 1204 1841981 - 1841966 - G 72 -3.2 -4.56597 | TTTGTCCTTGAAAAA CGCC TTGATGTC GGCG CGGCCTTCGAGAGCG TERM 1205 1842057 - 1842067 + g 70 -8.2 -3.827 | overlap 1842060 TAGGAGGATTCGGGG GCCG GAG CGGC TTTGCCTTCCTTCTT Tfu_1599 1843068 - 1842424 - | CRISPR-associated Cse2 family protein TERM 1206 1842899 - 1842914 + g 73 -10.4 -3.94002 | opp_overlap 1842898 1842899 ATGAGCCCCCACAAG TCGGGG GTGT CCCCGA TTTCCTTGCCTGCTC Tfu_1600 1844732 - 1843065 - | CRISPR-associated Cse1 family protein TERM 1207 1843772 - 1843791 + g 83 -5.6 -4.86939 | overlap 1843776 TCGGGTCGTGTTCGC GCGGCAGG TAGA CCTGTGGC TTTTTCAGTTTCTTC Tfu_1601 1847634 - 1844722 - | CRISPR-associated helicase Cas3 family protein protein TERM 1208 1848115 - 1848131 + r 71 -8.1 -4.1552 | overlap 1848113 TCCTCTTCTTCTCCA TTCACAT AGA ATGTGAA TTTATTAAAAGACTC Tfu_1602 1849811 - 1849197 - | hypothetical protein TERM 1209 1850507 - 1850455 - R 78 -12.7 -3.45514 | gap 1, opp_overlap 1850501, overlap 1850457 TAGAGAGAAGACGAA TACCCCGCACGGGCTAGGCCTG GGGCTGGTGG CAGGCGG-GCCCGTGCGGGGTG GAGGTGAGGATCCGC TERM 1210 1850505 - 1850457 - R 83 -15.3 -3.28842 | gap 1, opp_overlap 1850501, overlap 1850455 GAGAGAAGACGAATA CCCCGCACGGGCTAGGCCTG GGGCTGGTGG CAGGCGG-GCCCGTGCGGGG TGGAGGTGAGGATCC Tfu_1603 1851762 - 1850605 - | xylose isomerase Tfu_1604 1853185 - 1851791 - | xylulokinase Tfu_1605 1853339 - 1854592 + | putative xylose repressor Tfu_1606 1854844 - 1855428 + | hypothetical protein TERM 1211 1855435 - 1855474 + T 100 -21.4 -4.57073 | overlap 1855437 ATGGCGTGAGCTCGG ATGGTGGGGCGGCACTCC CGTG GGGGTGCCGCCCCACCTG TTTTTAGGACAGGTC TERM 1212 1855437 - 1855472 + T 100 -28.4 -3.90048 | overlap 1855435 GGCGTGAGCTCGGAT GGTGGGGCGGCACTCC CGTG GGGGTGCCGCCCCACC TGTTTTTAGGACAGG Tfu_1607 1858264 - 1855478 - | exo-1,4-beta-glucosidase TERM 1213 1856523 - 1856533 + g 81 -2.4 -5.06414 | overlap 1856511 TTGGCGGCGCGGACG GCGC GGA GCAC TTTTTCTTGGGCGGC Tfu_1608 1859547 - 1858297 - | putative xylose repressor TERM 1214 1859483 - 1859517 + g 73 -7.1 -4.2008 | gap 1, overlap 1859478 1859485 CAGCGGAGCACCACT GC-GAGGTTGGTGGCG CGGA CGTCGCCCACTTCTGC TTTGTTGGGGTCTCT Tfu_1609 1859713 - 1861386 + | ABC-type sugar transport system periplasmic component TERM 1215 1861644 - 1861659 + G 70 -4 -4.51196 | gap 1 ACTCCCCTTACCGGG GGATCTG GGA CAG-TCC TTTTGTCGGTTTCGA Tfu_1610 1861391 - 1862416 + | putative transport system integral membrane protein Tfu_1611 1862413 - 1863324 + | putative transport system integral membrane protein TERM 1216 1863384 - 1863407 + T 100 -9.6 -5.243 | gap 1 GTTTGTGTGTGACTG GACTCG-GCGG GCG CCGTGCGAGTC TTTTTTACTGGTTTG TERM 1217 1863825 - 1863799 - T 100 -15.2 -4.58395 | opp_overlap 1863799 CCGAGTGCGGAAAAA GCCCTCGTGC GGACGGG GCACGAGGGC TTTGCAATAACCGGG TERM 1218 1863799 - 1863825 + T 87 -15.2 -3.59979 | opp_overlap 1863799 CCGAGTGCGGAAAAA GCCCTCGTGC GGACGGG GCACGAGGGC TTTGCAATAACCGGG TERM 1219 1863868 - 1863836 - T 77 -11.9 -3.61517 | AGGGCTTTGCAATAA CCGGGTGCTCGAC TAGTGGT GTCGCGCGCCCGG TCGGCAGCGGCCCGG Tfu_1612 1866745 - 1863968 - | cellulose-binding family II protein Tfu_1613 1869109 - 1866812 - | putative alpha-glucosidase TERM 1220 1867970 - 1867984 + g 75 -4.9 -4.59773 | opp_overlap 1867970 GCGGCGGAGGAAGTA GCCGT GTTTG GCGGC TTTTTCGAAGTGGGG TERM 1221 1869188 - 1869173 - R 88 -2.6 -5.28166 | gap 1 CAAAACGAACAAAAA TCA-ACG CTC CGTATGA AGGAGACCACGCACC TERM 1222 1869290 - 1869314 + r 91 -17.1 -3.42996 | overlap 1869291 TGGGCGGGTGTGGGC GCGGCTCCCCG GGC CGGGGAGCCGG TTCTGGTCACTGGTG TERM 1223 1869291 - 1869313 + r 91 -20.6 -2.65476 | overlap 1869290 GGGCGGGTGTGGGCG CGGCTCCCCG GGC CGGGGAGCCG GTTCTGGTCACTGGT Tfu_1614 1871582 - 1869321 - | hypothetical protein Tfu_1615 1871657 - 1873648 + | beta-galactosidase TERM 1224 1873633 - 1873678 + T 100 -22.6 -4.01888 | GGCGGTGCTGCGGGG GCCGCGTCGGCCGTGACC CGGAGGGGAA GGCCGCGGCCGACGCGGC TTTCTCGTATGGCCT TERM 1225 1873800 - 1873823 + T 71 -8.1 -4.15044 | ACCCTCACCTTCGTG CCCCGGC CGGGAGGGAA GCCGGGG TTTCTTGGCGGGGAG Tfu_1616 1875649 - 1873997 - | alpha-L-arabinofuranosidase Tfu_1617 1876620 - 1875706 - | putative binding-protein-dependent transport protein Tfu_1618 1877513 - 1876623 - | binding-protein-dependent transport protein TERM 1226 1877494 - 1877456 - G 73 -9.5 -3.83318 | gap 1 TCCCGAAGAAGATAA GGGCGGGAGCGGCCCAGA GGGC TCCGGGCCGCTGC-ACTC GGGTGGTAGCCGAGG Tfu_1619 1878814 - 1877510 - | putative sugar-binding lipoprotein TERM 1227 1879625 - 1879598 - g 85 -17.8 -3.21099 | gap 1, opp_overlap 1879596 GGTGGGCACTACGAA CTGGGCTGGCGGC CTG GCCGCCA-CCCAG CATCTCATCGAACTG Tfu_1620 1879110 - 1880123 + | LacI family transcription regulator TERM 1228 1880327 - 1880384 + T 100 -19.2 -3.21934 | gap 2, overlap 1880327 1880329 GGACGAACGTGTCTA CC-CCGTGCGGGT-GAGGGGGCGACAGC TCGA GCTGTCGCCCCCTCTGCCTGTCCAGTGG GTTTTCTGGCAGGCG TERM 1229 1880327 - 1880385 + T 100 -19 -4.36914 | gap 3, overlap 1880327 1880329 GGACGAACGTGTCTA CCC-C-GTGCGGGT-GAGGGGGCGACAGC TCGA GCTGTCGCCCCCTCTGCCTGTCCAGTGGG TTTTCTGGCAGGCGC TERM 1230 1880329 - 1880381 + T 100 -20.6 -2.80077 | gap 1, overlap 1880327 1880327 ACGAACGTGTCTACC CCGTGCGGGT-GAGGGGGCGACAGC TCGA GCTGTCGCCCCCTCTGCCTGTCCAG TGGGTTTTCTGGCAG Tfu_1621 1881875 - 1880409 - | xylanase/chitin deacetylase TERM 1231 1882345 - 1882370 + G 78 -9.7 -4.16016 | gap 1, opp_overlap 1882338 GCACCAACCTGGTCT CCGCACTGCGGG ACC CCCGGA-TGCGG TTTATTCACGGGTCG Tfu_1622 1882218 - 1883219 + | UDP-glucose 4-epimerase Tfu_1623 1884498 - 1883398 - | hypothetical protein Tfu_1624 1884648 - 1885475 + | formate dehydrogenase accessory protein TERM 1232 1885482 - 1885538 + T 93 -18 -3.35775 | gap 1, overlap 1885482 GAGGATTGACTGCTC CCCCGCCTGAGGGCCGGGACGCC TCTGGGGCTCTC GGTGACCGGGCCCTC-GGCGGGG TGTTTGGGGGATGGT Tfu_1625 1886527 - 1885553 - | hypothetical protein Tfu_1626 1887380 - 1886655 - | GntR family transcriptional regulator TERM 1233 1887454 - 1887493 + r 88 -17.8 -3.06183 | gap 1, opp_overlap 1887414 1887411 GTGTGCGGGGATGGT GCCGGGTGTGGCCCCCGCC GAT GACGGGGGCCACGG-CGGC TTACATCCGAATCCA Tfu_1627 1890514 - 1887518 - | cellulose 1,4-beta-cellobiosidase TERM 1234 1890620 - 1890636 + r 75 -10.8 -3.91332 | opp_overlap 1890619 1890618 GCAGAACAAAAAGGG CCCCGC TACCC GCGGGG TTATTCTCTGCTCGT Tfu_1628 1892021 - 1890693 - | hypothetical protein Tfu_1629 1892165 - 1893556 + | beta-glucosidase TERM 1235 1894182 - 1894199 + T 70 -2.6 -4.61231 | opp_overlap 1894172 ACAACGGACCCTAAT CCCGAC CCTCAT GTCTGG TTTTTCACGGTGTGC Tfu_1630 1896342 - 1894204 - | oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal Tfu_1631 1897277 - 1896339 - | ABC transporter, permease protein Tfu_1632 1898280 - 1897270 - | putative ABC transporter permease TERM 1236 1898294 - 1898349 + r 79 -15.2 -3.01712 | ATGGGGGTCCTCGGG GTGCGGCGCGGTCCTGGGCGAAGGGG TGAT CCCCTCCGCCCAGGCTCGGGGGTCAC TATTGGGCGACCAGG Tfu_1633 1900106 - 1898349 - | putative solute-binding dependent transport lipoprotein TERM 1237 1900079 - 1900053 - G 71 -10.1 -3.75153 | gap 1, opp_overlap 1900070 1900071, overlap 1900055 GGCGGTGAATGCAAA GAGCGCCGCGAT GAGC AGCGCGGCGC-C TGCGGTTGGTCTACT TERM 1238 1900078 - 1900055 - G 76 -13.8 -3.46068 | opp_overlap 1900070 1900071, overlap 1900053 CGGTGAATGCAAAGA GCGCCGCGAT GAGC AGCGCGGCGC CTGCGGTTGGTCTAC Tfu_1634 1901279 - 1900500 - | putative ribosomal RNA methyltransferase Tfu_1635 1901554 - 1902003 + | 3-dehydroquinate dehydratase Tfu_1636 1902106 - 1903212 + | periplasmic phosphate binding protein TERM 1239 1903941 - 1903927 - g 72 -3.4 -4.56607 | TCACCAACGAGAAAA CCCTGC TGG ACCGGG CGAACGTGCGCGGTA TERM 1240 1903979 - 1904028 + G 82 -17.1 -3.01712 | gap 1 GATTGTTGCCGGGCT GCGCGCTGATCCGCACGCACTGAC CGA GGCAGTGGATGCGGCTC-GCGCGC TGTTGACCGAGCGGG Tfu_1637 1903245 - 1904090 + | hypothetical protein Tfu_1638 1904911 - 1904099 - | hypothetical protein Tfu_1639 1906584 - 1905046 - | glycosyltransferase Tfu_1640 1907917 - 1906928 - | D-alanine--D-alanine ligase Tfu_1641 1909254 - 1907932 - | valine-pyruvate aminotransferase Tfu_1642 1910079 - 1909636 - | RNA-binding S4 TERM 1241 1909774 - 1909794 + g 77 -3.2 -4.69664 | gap 1, overlap 1909765 GATGTAGCAGCGGGT CGCGATCGG CGCA CCCA-CGCG TTTTTCGATGATGTG TERM 1242 1909903 - 1909951 + g 80 -15.8 -3.14931 | AGCGGGCTTGTCGTT GACCCGAACGTGCCCGGCCCGG CATGC CTGGGCCGCGTCCGAGCGGGTC TTGGTGAGGCGTACC TERM 1243 1910084 - 1910108 + r 75 -12.2 -3.53012 | gap 1 TGGTCGTGCACGGTC CCCAGGGTAGC GTCG GCT-CCCTGGG TTTCGAAGGGGCCGG Tfu_1643 1911859 - 1910168 - | parallel beta-helix repeat-containing ricin B lectin Tfu_1644 1912060 - 1914624 + | penicillin amidase TERM 1244 1914676 - 1914696 + T 70 -13.9 -2.60212 | overlap 1914676 GAGCAGGCAGCGGCA CCCCGCCCG GTA CGGGCCGGG GTTCTACCCTGGTCG TERM 1245 1914676 - 1914697 + T 80 -13.7 -3.34043 | gap 1, overlap 1914676 GAGCAGGCAGCGGCA CCCC-GCCCG GTA CGGGCCGGGG TTCTACCCTGGTCGG Tfu_1645 1915568 - 1914735 - | hypothetical protein Tfu_1646 1916426 - 1915725 - | TetR family transcriptional regulator TERM 1246 1917322 - 1917369 + G 72 -14.8 -2.87132 | gap 1, opp_overlap 1917305 CGCGTCACCATTGGC GCCCAGGCTGTGGGC-ATCGCCC AGG GGGCGCTCGACTACGCCCTGGGC TATGTCAAGGAGCGC Tfu_1647 1916569 - 1917726 + | acyl-CoA dehydrogenase TERM 1247 1917759 - 1917727 - f 70 -14.1 -2.6563 | overlap 1917724 1917723 CTCTTGAAGAAGTGA GCGAGCAGCGCTGGC GAG GCCAGTGCTGCTGAC CGGAGGATCCGTTTG TERM 1248 1917775 - 1917803 + F 100 -26.1 -3.90112 | CGGAGGATCCGTTTG CGCCCCTCGGAGC CCA GCTCCGAGGGGCG TTTCCTTGGCACGGC TERM 1249 1917940 - 1917973 + G 91 -5.2 -5.40625 | TCAGCCGACATTGTC GGGGCGGATTATTC ACAATA GAGAATTCCGTCCC TTTTTTATGTCGTGT TERM 1250 1918277 - 1918304 + G 95 -13.5 -4.28774 | opp_overlap 1918274 1918275 AGAACAGCAACATCC GCCCTTCGGAG CATTGT TTCCGAAGGGC TTTTCCGTTGCATCC Tfu_1648 1917909 - 1918919 + | hypothetical protein Tfu_1649 1919091 - 1920758 + | catalase TERM 1251 1920800 - 1920832 + T 100 -16.3 -4.89477 | AGGTCAGTAGTTTCC GCGGTGGTGCGGG CCCCTCC CCCGTGCCACCGC TTTTCTTGTTCCGGC Tfu_1650 1921372 - 1920902 - | hypothetical protein Tfu_1651 1921889 - 1921386 - | hypothetical protein Tfu_1652 1922775 - 1922008 - | hypothetical protein Tfu_1653 1923856 - 1923023 - | chloride peroxidase TERM 1252 1923429 - 1923459 + g 72 -8.8 -4.07568 | overlap 1923430 ATCTTCTTGAACACT TCGGCGTCCACGCC CTG GGGGTTGTCGCCGG TTTTGAGAAGGAACG TERM 1253 1924074 - 1924126 + r 80 -15.6 -2.78891 | gap 2, overlap 1924071 ATGCCTGTCCGGGAC G-GGCATGGCCGG-CACGCAGCGGGC GGC GACTGCTGCGTGCCCGTCCGTGCTGC TCCTTACCTTGCGCT TERM 1254 1924355 - 1924399 + r 77 -12.1 -3.59627 | overlap 1924358 1924364 GGGGAAGCCGCGCTG CCGCTCGCTG-GCCCGGGCCC TGTCC GGGCCCGGGCACGGC-ACAGG TTTGGCCCCTTTCCT Tfu_1654 1925185 - 1924433 - | hypothetical protein Tfu_1655 1926085 - 1925597 - | hypothetical protein Tfu_1656 1926354 - 1927157 + | helix-hairpin-helix DNA-binding motif-containing protein Tfu_1657 1927154 - 1927360 + | hypothetical protein TERM 1255 1927348 - 1927363 + T 70 -4.7 -4.43221 | opp_overlap 1927348 CAGAAACCTCAAAAA CGGTT TTTGTT AACCG TTTTCTGCCATATTT TERM 1256 1927363 - 1927348 - T 80 -4.7 -4.72486 | opp_overlap 1927348 CAGAAACCTCAAAAA CGGTT TTTGTT AACCG TTTTCTGCCATATTT Tfu_1658 1929371 - 1927572 - | Sel1-like repeat-containing serine/threonine protein kinase TERM 1257 1929753 - 1929803 + G 80 -16.9 -3.17763 | gap 1, overlap 1929753 1929785 GTGCGGGTCCGGTCG CACCGAGGACGGGGTTTCGCTCCG CTCA TGGTG-GGAATCCCGTCCCCGGTG TTCCTCCGGTGTCCG Tfu_1659 1929577 - 1930278 + | hypothetical protein Tfu_1660 1932545 - 1930668 - | dehydrogenase TERM 1258 1932195 - 1932156 - G 82 -11.4 -4.21194 | gap 1, opp_overlap 1932156 1932157, overlap 1932157 TCGGAGCAGGGAAAA CCCCGGGTTCGGAGGGCGT GTC ACTCCCCCC-AATCCGGGA TTATGGGATGTCGGA Tfu_1661 1933489 - 1932578 - | putative ABC transporter membrane protein Tfu_1662 1934217 - 1933486 - | ABC-type Mn/Zn transport systems ATPase component TERM 1259 1933962 - 1933990 + g 72 -4.3 -4.57569 | CCCAGTCCACCTGTT CGGACTGGGGGAC GTA GCCCAGCAGGCCG TTTTTGCGGGCCTGG Tfu_1663 1935149 - 1934214 - | putative ABC transporter substrate-binding protein Tfu_1664 1935915 - 1935226 - | iron dependent repressor TERM 1260 1935976 - 1935946 - H 71 -3.8 -4.56597 | opp_overlap 1935964, overlap 1935947 CGTTCCCCGCAAAAA GTCGGGGCCTCC GGGCAAG GGCGGCCGCGAA GAGGGGACGCCCTTC TERM 1261 1935993 - 1936014 + H 86 -2.9 -5.18726 | AGGGGACGCCCTTCA CTCGCTGAG CCGG TTCGGGGAG TTTTTCTTCTCGCGG TERM 1262 1936252 - 1936310 + H 73 -14.4 -2.87881 | gap 1, opp_overlap 1936233 GGATCGTCCCTCGGA CGTTCCGGGCCGG-CCGCCGCGGCCAG CCCCCA CAGGTCGCGGCGGTCCTAGCCGTAACG TCTCTCAAGGAGTTC Tfu_1665 1936330 - 1937646 + | cellulose-binding family II protein TERM 1263 1937705 - 1937731 + T 100 -23 -3.06261 | CCGTCACCGGCCCGA GCCCGCTCCGCC ACT GGCGGGGCGGGC TCTTCACGCTTCGAG Tfu_1666 1939837 - 1937735 - | aminodeoxychorismate synthase, glutamine amidotransferase subunit / aminodeoxychorismate synthase, subunit I Tfu_1667 1940105 - 1940515 + | regulatory protein, MerR Tfu_1668 1942147 - 1940729 - | sugar transporter TERM 1264 1942281 - 1942311 + H 86 -13.2 -3.90425 | TCTGGGGCGGAGGCG CGCGGTTCGGACAG CCG CTGCCCGAGCGGCG TTCTTCGTTTCGGTA Tfu_1669 1942411 - 1943376 + | hypothetical protein Tfu_1670 1943532 - 1944002 + | putative acetyltransferase TERM 1265 1944421 - 1944439 + F 70 -2.4 -4.59342 | overlap 1944423 ATGAAAACTCCCCAG CGTCTCAA TTA TTGAGATA TTTGTTTCTCATAGC Tfu_1671 1944479 - 1945234 + | s-adenosylmethionine (SAM)-dependent methyltransferase Tfu_1672 1946258 - 1945257 - | putative oxidoreductase Tfu_1673 1947880 - 1946306 - | phosphodiesterase/alkaline phosphatase D TERM 1266 1947910 - 1947900 - H 78 -3.2 -4.91511 | ACCCCATTACAAAAA GTGA CAA CCAC TACTCTCTGCGCATA TERM 1267 1948327 - 1948309 - g 76 -7.4 -4.2828 | overlap 1948310 CCGTAGCCACGAAAA TGGGGC GGAGGGT GCCCCA GTCCCCCGAGGTCTA Tfu_1674 1948068 - 1949045 + | putative oxidoreductase Tfu_1675 1949899 - 1949075 - | hypothetical protein TERM 1268 1950399 - 1950388 - g 78 -5.8 -4.58395 | opp_overlap 1950397, overlap 1950390 GTCATGTCGGAAAAA CAGG TGTC CCTG GCGGGCACCACCTAT TERM 1269 1950740 - 1950796 + G 74 -15.8 -2.74012 | opp_overlap 1950748 CCCCGCTCCAGCATG TCATCGAAGTCGGCG-CCAGCCCGCGGG CCA CCCTCGGCCTGGTCGCCG-CTTCGCGGG TGCTTGCGCTGCTGC TERM 1270 1950788 - 1950748 - g 74 -15.4 -3.07113 | opp_overlap 1950740 CAGCATGTCATCGAA GTCGGCG-CCAGCCCGCGGG CCA CCCTCGGCCTGGTCGCCG-C TTCGCGGGTGCTTGC Tfu_1676 1949989 - 1951008 + | MoxR-like ATPase Tfu_1677 1951005 - 1951976 + | hypothetical protein TERM 1271 1952051 - 1952076 + G 73 -9.7 -3.86897 | gap 1 TACCTGCTGATGCAG CGCAG-GCGCAC CGA GTACGCGCTGCG TTTCTCCAACCTCGC TERM 1272 1952121 - 1952152 + G 72 -8.6 -3.96624 | gap 1, overlap 1952112 1952117 TCGTGCCGCAGGCGT CGGCGTGGC-GGCGC CAC GTCCCAGCCGCGCTG TTTCTGCTCACCATC Tfu_1678 1951973 - 1952920 + | von Willebrand factor, type A Tfu_1679 1953015 - 1953752 + | HAD family hydrolase Tfu_1680 1953749 - 1954558 + | hypothetical protein TERM 1273 1954586 - 1954564 - T 100 -20.6 -3.9941 | TGGGCGATAACGAAA GCGCCTCCCG TTT CGGGAGGCGC GTGGTCCCCTCACCA Tfu_1681 1955903 - 1954620 - | integral membrane protein TERM 1274 1955347 - 1955292 - G 74 -11.1 -3.68222 | overlap 1955294 GGTGAACGCGAAGAA CAGCAGCCCTGCCGCGG-ACAGGACCG CGGC CAGTCC-GTGCCACCGCAGCGCCGCGG CAATCCGCGCAGTGT TERM 1275 1955345 - 1955294 - G 73 -12.3 -3.42069 | overlap 1955292 TGAACGCGAAGAACA GCAGCCCTGCCGCGG-ACAGGACCG CGGC CAGTCC-GTGCCACCGCAGCGCCGC GGCAATCCGCGCAGT fabG 1956787 - 1956029 - | 3-ketoacyl-(acyl-carrier-protein) reductase TERM 1276 1957193 - 1957174 - g 79 -15 -3.2794 | GGGGATCGACACCAA CCAGCGCG CCCT CGCGCTGG CACGCCGCAATGCGG Tfu_1683 1956902 - 1957519 + | 16S rRNA m(2)G 1207 methyltransferase Tfu_1684 1957573 - 1958127 + | tRNA/rRNA methyltransferase TERM 1277 1958291 - 1958266 - f 90 -19.1 -2.71011 | ACCCGTCCCGAAGTA GCAGCAGCGTC ACGA GACGCTGCTGC TCCGACTCTGACGAC TERM 1278 1959406 - 1959383 - g 74 -12.4 -3.63073 | GACATCGCGGAAGAA CTCGTCGGGG AGAT CGCCGACGAG CACGACCCGGAAGAC Tfu_1685 1958360 - 1959748 + | CBS Tfu_1686 1959745 - 1960767 + | CBS Tfu_1687 1960893 - 1961669 + | 2,5-didehydrogluconate reductase Tfu_1688 1963297 - 1961777 - | aldehyde dehydrogenase family protein TERM 1279 1961952 - 1962008 + g 82 -14.4 -3.72576 | opp_overlap 1961992, overlap 1961945 1961954 CGGGCGGCGACTTCG CCGGCA-CGGTCCAGGTCTGTGCTCCAC ACC GAGGAGCACAGCCC-GGCCCGGTCCTGG TTTACTGCCGCGACC TERM 1280 1961954 - 1962005 + g 72 -15 -2.96695 | gap 1, opp_overlap 1961992, overlap 1961945 1961952 GGCGGCGACTTCGCC GGCACGGTCCAGGTCTGTGCTCCAC ACC GAGGAGCACAGCCC-GGCCCGGTCC TGGTTTACTGCCGCG Tfu_1689 1964551 - 1963400 - | hypothetical protein TERM 1281 1963733 - 1963762 + g 80 -16.5 -3.14132 | gap 1, overlap 1963757 TCCGGTTCTGCTGAG GCGCAGCATCGTCG TGG CG-CGGTGCTGCGC TTCGTCCGCGGGGAC Tfu_1690 1964676 - 1965767 + | twin-arginine translocation pathway signal Tfu_1691 1965764 - 1966606 + | ABC-type nitrate/sulfonate/bicarbonate transport system ATPase component TERM 1282 1967139 - 1967156 + G 72 -8.3 -4.09685 | CCGCTGCTGGTCAAG GCCGCGG TCTC CCTCGGC TTTTCACCGGTGAGC Tfu_1692 1966599 - 1967444 + | putative ABC transporter membrane protein Tfu_1693 1967470 - 1968819 + | putative monooxygenase TERM 1283 1968950 - 1968934 - f 81 -7.3 -4.4715 | overlap 1968935 1968946 CTCCAACCCATAAAA CCGACTA AAT TAGTCGA GAATCATTTCGCCTC Tfu_1694 1968987 - 1969910 + | hypothetical protein TERM 1284 1969920 - 1969957 + T 73 -12 -3.41073 | gap 1, overlap 1969919 GACTGACGCCCACTC GCTGGCGGGGGACC-CT GCCGG AGCGGTGCCCCGCGAGC TGTTTCCCTCAGGTC Tfu_1695 1971683 - 1969971 - | cytochrome-c oxidase Tfu_1696 1972123 - 1971689 - | hypothetical protein TERM 1285 1972406 - 1972423 + H 76 -9.9 -4.13767 | opp_overlap 1972400 CGCCCGAAACCTTGA CCTCAAC TTTG GTTGAGG TTTTAGGCTGCCGCG TERM 1286 1973097 - 1973113 + G 71 -11.5 -3.60792 | CCCGTGTTCGTGCTG CCCGCGC GCC GCGTGGG TTTCCGCCTTGCCCG Tfu_1697 1972509 - 1974404 + | ABC-type multidrug transport system ATPase and permease components TERM 1287 1974607 - 1974653 + F 71 -9.6 -3.69323 | opp_overlap 1974613 1974642, overlap 1974610 GTGACTCAAATCTTC CAATGAGCATTGTCATGGTTTA CGC TCAAACATTACAACGCTCATTG TTTCAATGGTCATCG Tfu_1698 1974684 - 1976210 + | putative monooxygenase Tfu_1699 1976207 - 1977145 + | putative hydrolase Tfu_1700 1977142 - 1978047 + | short chain dehydrogenase TERM 1288 1978057 - 1978110 + F 100 -29.7 -2.98823 | gap 1 TCCTAGAGGGCTGCG TGCGCCGACCCGGGTGG-GGCCCATG TGA CATAGTCCACCACCCGGGTCGGCGCG TCTCTATACCCCACC Tfu_1701 1978272 - 1980344 + | hypothetical protein Tfu_1702 1981784 - 1980456 - | sugar-binding protein Tfu_1703 1982681 - 1981803 - | putative transport system permease ABC transporter protein Tfu_1704 1983645 - 1982671 - | putative transport system permease ABC transporter protein Tfu_1705 1984136 - 1985470 + | putative oxidoreductase Tfu_1706 1987203 - 1985650 - | putative aldehyde dehydrogenase Tfu_1707 1987333 - 1988487 + | putative oxidoreductase Tfu_1708 1988484 - 1989341 + | hypothetical protein Tfu_1709 1989338 - 1990279 + | UDP-glucose-4-epimerase Tfu_1710 1990351 - 1991385 + | LacI family transcription regulator TERM 1289 1991413 - 1991454 + F 76 -14.3 -3.05521 | overlap 1991421 1991453 ATCTCTGGCTTTGCC TGCTTCCAGCCGCAGGCCC CGCG GGGCCTGCGGCTGTCGTCG TCTTGGCCGTGTCGT TERM 1290 1991421 - 1991446 + F 100 -21.9 -2.86432 | overlap 1991413 CTTTGCCTGCTTCCA GCCGCAGGCCC CGCG GGGCCTGCGGC TGTCGTCGTCTTGGC TERM 1291 1991591 - 1991579 - f 79 -6.2 -4.64766 | opp_overlap 1991589, overlap 1991580 TTCAGATGCGAAAAA CCGC ACGCA GCGG ACTTGACGTGCGCCA TERM 1292 1991887 - 1991855 - g 70 -12 -3.2794 | gap 1 GCTCATCGATACCAA CCGCCGCAGCGCCAC AGTT GTGGGGCT-CAGCGG GGCCGACATCGACGA Tfu_1711 1991655 - 1992335 + | GntR family transcriptional regulator Tfu_1712 1992456 - 1993433 + | hypothetical protein TERM 1293 1993612 - 1993586 - g 72 -4.4 -4.59109 | gap 1 GAGATTCCGGAAAAA GCG-GGGCTGA CCAGTT TCAGTCCGCGC TGGTGGCCGGAAGGA Tfu_1713 1993439 - 1993939 + | hypothetical protein Tfu_1714 1994073 - 1995575 + | hypothetical protein Tfu_1715 1995606 - 1996472 + | dihydrodipicolinate synthase TERM 1294 1996728 - 1996741 + G 81 -3.7 -4.8667 | overlap 1996717 1996705 GACCGGCGGCGGCTC GGGTC ACCT GCCCC TTTTTCTCGGCTATG Tfu_1716 1996555 - 1998264 + | glycerone kinase Tfu_1717 1999477 - 1998398 - | putative racemase TERM 1295 1998676 - 1998720 + g 71 -10.8 -3.66178 | TACCGCCCACTCGCA CCGCGTTG-GGCTGGGCGATGT CAC ACACC-CCCAGTTGCAGCGCGG TTTCGAATTCGGCGA Tfu_1718 2000387 - 1999482 - | 5-dehydro-4-deoxyglucarate dehydratase Tfu_1719 2001327 - 2000446 - | hypothetical protein Tfu_1720 2002490 - 2001324 - | hypothetical protein Tfu_1721 2003641 - 2002487 - | putative oxidoreductase TERM 1296 2003797 - 2003812 + r 81 -3.2 -5.055 | overlap 2003768 2003794 CTCCGTACCGGAGAG GTAGAC GATC GGCTAC TTTTTTACCCGTTCG Tfu_1722 2005274 - 2004669 - | hypothetical protein Tfu_1723 2005769 - 2005278 - | hypothetical protein Tfu_1724 2006509 - 2006087 - | hypothetical protein Tfu_1725 2007026 - 2006619 - | hypothetical protein Tfu_1726 2007743 - 2007078 - | peptide deformylase Tfu_1727 2008734 - 2008051 - | HAD family hydrolase Tfu_1728 2009153 - 2010475 + | Bcr/CflA subfamily drug resistance transporter TERM 1297 2010503 - 2010529 + F 91 -16.6 -3.46602 | opp_overlap 2010503 AGGTTGGTGGTTAAA GGGCCGCTCC GTGCAGA GGAGCGGCCC TTGTCCTGTCACGAC TERM 1298 2010529 - 2010503 - f 91 -16.6 -3.53091 | opp_overlap 2010503 AGGTTGGTGGTTAAA GGGCCGCTCC GTGCAGA GGAGCGGCCC TTGTCCTGTCACGAC Tfu_1729 2010862 - 2013375 + | TPR repeat-containing protein Tfu_1730 2013800 - 2014780 + | hypothetical protein Tfu_1731 2015222 - 2014791 - | hypothetical protein Tfu_1732 2016326 - 2015361 - | hypothetical protein Tfu_1733 2018675 - 2016831 - | putative acyl-CoA synthetase, long-chain-fatty acid:CoA ligase TERM 1299 2019382 - 2019345 - R 79 -4 -4.89477 | gap 2, overlap 2019346 2019347 CGGGGAAGAAGAAAA CGCCCGCTCAGGCTACGG CGCG CCGTT-CCAGCGC-GGCG CTGAGCGCGAAAATC Tfu_1734 2020659 - 2019352 - | Bcr/CflA subfamily drug resistance transporter TERM 1300 2020583 - 2020603 + g 78 -6.1 -4.6635 | overlap 2020564 2020563 CTCGGCTCGGAGTCA CTCTCCG GGCAGGG CGGAGGG TTTTCTTGGGAATTT TERM 1301 2020772 - 2020745 - R 83 -2.7 -5.14965 | opp_overlap 2020747 2020754 2020757, overlap 2020746 2020747 ACGGGGAGTAAAAAA TCCACACCATC TCATCC GATGATGTGAT CTTTATTACTCGAGG Tfu_1735 2022114 - 2020936 - | putative regulator TERM 1302 2021089 - 2021110 + g 86 -18.7 -3.18681 | CGCGCAGCCCTCGAA CCCGCCGCG ACGT CGCGGCGGG TTACTGGCCTTGGGC TERM 1303 2021323 - 2021271 - G 82 -6.3 -4.72272 | gap 3, overlap 2021272 2021273 CTGCTTGAGCAAAAA CGCGTCGCACCGCACGCTCCAGCTCG TGCA CGAGC-AGAGCGTG-GACGAGGCG-G TCGTCGGTGAACTCG TERM 1304 2021897 - 2021839 - G 77 -17.3 -2.66748 | gap 1, overlap 2021835 2021871 GAGCAGGGAAACCGA CGCTGCCAGGCGTGCTCC-CGCGCCGAC AGCA ACCGGAGCGCGGCGCATGCCCCGCAGCG GGCACGGTCCGGCCA Tfu_1736 2022396 - 2023619 + | hypothetical protein TERM 1305 2023720 - 2023765 + F 100 -21.1 -3.30635 | overlap 2023724 2023746 CCGCCGCCCGGGCAG GGCAGCGGGCTCGGCCCGCGT CCGC ACCCGGTCCGAGTCCGCTTCC TTGTCCCGGGCTTTC TERM 1306 2023724 - 2023761 + F 100 -19.1 -3.44146 | overlap 2023720 2023746 CGCCCGGGCAGGGCA GCGGGCTCGGCCCGCGT CCGC ACCCGGTCCGAGTCCGC TTCCTTGTCCCGGGC Tfu_1737 2023877 - 2026195 + | oxidoreductase alpha (molybdopterin) subunit Tfu_1738 2026381 - 2026803 + | hypothetical protein Tfu_1739 2026911 - 2029364 + | PAS/protein phosphatase 2C-like Tfu_1740 2030300 - 2029395 - | LysR family transcriptional regulator TERM 1307 2030993 - 2030970 - g 72 -13.2 -3.14931 | gap 1 GGCATCGGCGACGAA CGGCTC-ACCG TCG CGGTAGAGCCG CGCGGCTGCGCCAGC Tfu_1741 2030385 - 2031317 + | threonine dehydratase Tfu_1742 2032182 - 2031337 - | glycosyltransferase TERM 1308 2032454 - 2032431 - R 77 -11.6 -3.76224 | CCCGCACCGAGGAAA GCCCGGGACG CGGG CGCGCCGGGC GGCGCGGCGGTCAGC Tfu_1743 2032818 - 2032465 - | hypothetical protein TERM 1309 2033081 - 2033032 - R 100 -36.5 -4.57569 | opp_overlap 2033077 2033079 GGATGTTCCCAAAAA CGCACGGGGCGCCCCGGCAGGCC AAGC GTGCTGCCGGGGCGCCCCGTGCG GGTGGCGAACGTCAA Tfu_1744 2034635 - 2033103 - | xaa-Pro aminopeptidase Tfu_1745 2035804 - 2035562 - | hypothetical protein Tfu_1746 2037177 - 2035852 - | hypothetical protein Tfu_1747 2037501 - 2038865 + | putative cytochrome P450 Tfu_1748 2038832 - 2039953 + | cytochrome P450-family protein Tfu_1749 2040367 - 2040044 - | hypothetical protein Tfu_1750 2040938 - 2042317 + | hypothetical protein TERM 1310 2042358 - 2042373 + F 100 -4.6 -5.7827 | CCCCTTCTGCTCCCG CCCAAG GGTG CTCGGG TTTTTTCTTTCTCTT TERM 1311 2043037 - 2043004 - g 93 -17.4 -3.57561 | CCGGAAGCTTTGAAA GCCATCCACCGGGC TTTGGT GCCCGGCGGCTGGC TCTGCCTGTCCATGG Tfu_1751 2042587 - 2043255 + | putative methyltransferase TERM 1312 2043586 - 2043569 - g 78 -8.3 -4.38712 | TCGACCCGGAGAAAA CCGCGTG GGGC CTCGCGG ACGCGCTGGTGCCGA Tfu_1752 2043391 - 2045166 + | protein phosphatase 2C-like Tfu_1753 2047377 - 2045167 - | helicase RecD/TraA TERM 1313 2046535 - 2046549 + g 81 -7.1 -4.56597 | GGTCACTGATTCGCC GTCCC GGTCA GGGAC TTTTTCGCGGACCAC TERM 1314 2046987 - 2047009 + g 78 -9.8 -4.1899 | GGCCGAGTTTCGGCA CTTCCAGGAG CCG CTCCGGGGAG TTTTCGATAACGTCG Tfu_1754 2048007 - 2047654 - | hypothetical protein Tfu_1755 2049252 - 2048041 - | alcohol dehydrogenase Tfu_1756 2051484 - 2049658 - | tyrosine protein kinase:Serine/threonine protein kinase TERM 1315 2050046 - 2050071 + g 72 -8.2 -3.96841 | overlap 2050012 2050010 2050060 AGCTCCTCCTCGTAG CGGCGCCGCT CTTCGT AGCGCTGCCG TTCTATTTCTTGGGC TERM 1316 2051588 - 2051537 - H 75 -9.3 -3.98282 | gap 2, opp_overlap 2051554 2051555 GCGATAGTAACGAAA CCGGGAGCCTGCTCTGGGCGAGCCG AACG CGGCCCTCCCCG-GCAC-CTGCCGG GCTGTTCCGCGTCCG TERM 1317 2051554 - 2051609 + H 100 -20.2 -3.41229 | opp_overlap 2051537, overlap 2051555 GGGAGCCTGCTCTGG GCGAGCCGAACGCGGCCCTCCCCGGC ACCT GCCGGGCTGTTCCGCGTCCGGCTCGG TTCTCCTCGCGGTCT TERM 1318 2051555 - 2051608 + H 100 -23.7 -2.64416 | opp_overlap 2051537, overlap 2051554 GGAGCCTGCTCTGGG CGAGCCGAACGCGGCCCTCCCCGGC ACCT GCCGGGCTGTTCCGCGTCCGGCTCG GTTCTCCTCGCGGTC Tfu_1757 2052209 - 2053000 + | putative glycerophosphoryl diester phosphodiesterase Tfu_1758 2053063 - 2054445 + | putative transporter TERM 1319 2054490 - 2054508 + F 80 -13.8 -3.32844 | opp_overlap 2054490 GCGCCCGGGGAGGAA GGCGGGCC GTG GGCTCGCC TTCTCCCCTCGCCGC TERM 1320 2054753 - 2054771 + F 71 -7.4 -4.07687 | opp_overlap 2054743 GAAGATCCGCCTAAC GCGGAC GCAGCCG GTCCGC TTTTCAGGACACCAT Tfu_1759 2055121 - 2055510 + | hypothetical protein TERM 1321 2055515 - 2055557 + T 100 -23.6 -3.56092 | opp_overlap 2055522 2055523, overlap 2055516 2055518 2055523 GAAGCGCCTGAGGGC AGACGAAGGGCGGTCCAGGA GCG TCCTGGACCGCCTTTTGTCA TTTCCGCGGTGCTCA TERM 1322 2055516 - 2055556 + T 100 -27.1 -2.73441 | opp_overlap 2055522 2055523, overlap 2055515 2055518 2055523 AAGCGCCTGAGGGCA GACGAAGGGCGGTCCAGGA GCG TCCTGGACCGCCTTTTGTC ATTTCCGCGGTGCTC TERM 1323 2055518 - 2055554 + T 100 -23.9 -2.91144 | opp_overlap 2055522 2055523, overlap 2055516 2055515 2055523 GCGCCTGAGGGCAGA CGAAGGGCGGTCCAGGA GCG TCCTGGACCGCCTTTTG TCATTTCCGCGGTGC TERM 1324 2055550 - 2055522 - T 100 -18.9 -3.27022 | opp_overlap 2055518 2055516 2055515 2055523, overlap 2055523 CTGAGGGCAGACGAA GGGCGGTCCAGGA GCG TCCTGGACCGCCT TTTGTCATTTCCGCG TERM 1325 2055523 - 2055549 + T 100 -22.4 -4.61566 | opp_overlap 2055523 2055522, overlap 2055518 2055516 2055515 TGAGGGCAGACGAAG GGCGGTCCAGGA GCG TCCTGGACCGCC TTTTGTCATTTCCGC TERM 1326 2055549 - 2055523 - T 100 -22.4 -2.55999 | opp_overlap 2055518 2055516 2055515 2055523, overlap 2055522 TGAGGGCAGACGAAG GGCGGTCCAGGA GCG TCCTGGACCGCC TTTTGTCATTTCCGC Tfu_1760 2056379 - 2055570 - | HAD family hydrolase TERM 1327 2056335 - 2056313 - G 70 -12 -3.28924 | CAGCCCCGGGGACAA GGTGCTCTTC CCG GACGAGCACC CCGTCCATGTCCATC Tfu_1761 2057386 - 2056712 - | protein affecting phage T7 exclusion by the F plasmid Tfu_1762 2058986 - 2057403 - | apolipoprotein N-acyltransferase TERM 1328 2059457 - 2059429 - H 85 -4.7 -5.00884 | opp_overlap 2059438, overlap 2059431 ACCGTCCCGAAAAAA TCGATCAATTC GATCAGA GAATCGATCAA TTTTTGCGGATAGGT Tfu_1763 2059553 - 2060785 + | ABC-type sugar transport systems ATPase components TERM 1329 2060811 - 2060841 + T 78 -16.1 -2.71011 | GTTCATCGTCCACAC TTCGGGGCGTCCC TTGCC GGGGCGCCCCGAC TGCTTGCAGCCCGGT Tfu_1764 2062064 - 2060868 - | putative glycosyl transferase TERM 1330 2062402 - 2062362 - R 93 -19.8 -2.78384 | gap 1, opp_overlap 2062365 CTGGTCGGCAGCACA CCACG-GGGATGCCGGAAC CGGT GCACCGGCATCCCCCGTGG CTTAGAAGGACGGTC Tfu_1765 2065306 - 2062463 - | helicase, C-terminal:DEAD/DEAH box helicase, N-terminal TERM 1331 2064538 - 2064590 + g 70 -8.4 -3.89291 | gap 2, overlap 2064543 2064561 CGACCTCGATCTCCA CGG-TGCG-CTGCCGGGCATGCCG GGACCGG CGGCGTTTCCGGGAGCCGCGTCCG TTCTTCTCCTCTTCC Tfu_1766 2066279 - 2065404 - | hypothetical protein Tfu_1767 2066701 - 2066318 - | hypothetical protein Tfu_1768 2067661 - 2066750 - | Sec-independent protein translocase TatC Tfu_1769 2068005 - 2067700 - | twin-arginine translocation protein TatA/E Tfu_1770 2068261 - 2068013 - | hypothetical protein Tfu_1771 2070326 - 2068299 - | transcriptional regulator TERM 1332 2068739 - 2068719 - G 71 -2.5 -4.57569 | overlap 2068722 CCACCCTTCCAAAAA GTAGTGC CCGTCCT GCACGAC CAGCCGCATCGGGTC TERM 1333 2069160 - 2069177 + g 79 -4.9 -4.67353 | gap 1 CATCCACAGCAGGCT CAGGT-CT TTG AGCACCTG TTTTTCGGTGAGTCC TERM 1334 2070152 - 2070164 + g 77 -3.3 -4.72201 | overlap 2070153 TGATGATCGGAATCC CTGCG TCG CGCAA TTCTTTTTTGTCGCG Tfu_1772 2070478 - 2071482 + | hypothetical protein Tfu_1773 2072703 - 2071567 - | FKBP-type peptidyl-prolyl cis-trans isomerase 1 TERM 1335 2072796 - 2072850 + r 75 -14.3 -2.95298 | gap 1, opp_overlap 2072793 2072794 2072808 2072813 GGTCGTTAAGAACTT G-GGGGCACGTAACGGAATCGCGGTA GTTC TGCGACGATTCCGTGCCGTGCCCCGC TCTGTCATGCGTCGC Tfu_1774 2073178 - 2072855 - | putative Lsr2-like protein TERM 1336 2073433 - 2073406 - R 100 -20 -4.13654 | opp_overlap 2073411, overlap 2073409 CCGCCAAAGTATAAA GAAGACCCCGCA TTTC TGCGGGGTCTTC CGATAGGCTCCCGGC TERM 1337 2073430 - 2073409 - R 95 -15.9 -4.1851 | opp_overlap 2073411, overlap 2073406 CCAAAGTATAAAGAA GACCCCGCA TTTC TGCGGGGTC TTCCGATAGGCTCCC TERM 1338 2073411 - 2073428 + r 72 -12.7 -3.06162 | opp_overlap 2073409 2073406 AAAGTATAAAGAAGA CCCCGCA TTTC TGCGGGG TCTTCCGATAGGCTC Tfu_1775 2074646 - 2073561 - | putative alcohol dehydrogenase (zinc-binding) TERM 1339 2073960 - 2073995 + g 81 -2.5 -5.06414 | gap 1, opp_overlap 2073963, overlap 2073965 ATCGCTGGGGGTGAG GAAGTGCGTGGCCC CCAGGGAAC GGGCCA-GCTCCTC TTTTTCTTCGACCGG Tfu_1776 2076100 - 2074682 - | betaine-aldehyde dehydrogenase Tfu_1777 2077273 - 2076122 - | putative acyl-CoA dehydrogenase TERM 1340 2077426 - 2077466 + r 73 -12.6 -3.3095 | gap 1, opp_overlap 2077462, overlap 2077418 CAGGGTGCGGGACGG GCCCGTGGTGTCCC-TCCG CTGC TGGACGGGACACCACGCCC TTGTCGCCCCTCTGT Tfu_1778 2080238 - 2077485 - | regulatory protein, LuxR TERM 1341 2077601 - 2077639 + g 82 -18.9 -2.83715 | AGAGGCGCTGCGCGA TCTCCCGGTTGGTGGCG CCCTC CGCCACCAACCGTGCGA TCTGCTCCTGCTGGG TERM 1342 2079068 - 2079109 + g 70 -15.7 -2.68434 | overlap 2079065 GCAGGATCGACGCCT CCTGGGCGGTCAGGCCGGG CTCG CCCGCCGAGACCGCCGAGG TGATCTCGTATCCCA Tfu_1779 2081745 - 2080429 - | hypothetical protein Tfu_1780 2082903 - 2081830 - | ABC transporter permease protein Tfu_1781 2083770 - 2082907 - | ABC transporter permease Tfu_1782 2084505 - 2083780 - | ABC-type branched-chain amino acid transport systems ATPase component TERM 1343 2083928 - 2083874 - G 74 -10.8 -3.81951 | opp_overlap 2083896 TGGGAGAGCACGAAA CCGTGGTCGGTGATGG-ACAGGGCGC TTGCG GCGTTCTGTTCCACCAGC-ACCACGG TCAGCCCAGTGCGGT Tfu_1783 2085292 - 2084498 - | ABC-type branched-chain amino acid transport systems ATPase component TERM 1344 2085381 - 2085346 - H 100 -24.2 -2.87344 | GACCGCGGGGATATA CCTCGCCGCATACCAA CTGG TTGGCATGCGGCGAGG TCACGAGTGCGGCGC Tfu_1784 2085585 - 2086355 + | putative oxidoreductase TERM 1345 2086957 - 2086928 - g 71 -11.3 -3.59979 | TCCGCCGACCCGAAA GCCGACCCGGTGC CGGC GCACCGCGCCGTC GTCGACGCCGTGCGC Tfu_1785 2086358 - 2087092 + | GntR family transcriptional regulator TERM 1346 2087171 - 2087153 - g 82 -14.6 -3.53012 | TGTGCCGGGTCGAAA CCGACGAC GGG GTCGTCGG CTGGGGCGAACCCGT Tfu_1786 2087089 - 2088234 + | galactonate dehydratase Tfu_1787 2088329 - 2089048 + | GntR family transcriptional regulator TERM 1347 2089140 - 2089087 - T 100 -23.3 -3.3334 | gap 1, overlap 2089075 2089088 AAGCGCAGCGCACAA CTGCCTGGGCTGCGGCGGGGAG AAACGCTCCCG CTCCCCGCCGCAGCCC-GGCAT CACCACTCACATGCC TERM 1348 2089139 - 2089088 - T 100 -26.8 -2.59683 | gap 1, overlap 2089075 2089087 AGCGCAGCGCACAAC TGCCTGGGCTGCGGCGGGGAG AAACGCTCCCG CTCCCCGCCGCAGCCC-GGCA TCACCACTCACATGC Tfu_1788 2090505 - 2089147 - | hypothetical protein Tfu_1789 2091325 - 2090576 - | putative 20S proteasome alpha-subunit Tfu_1790 2092217 - 2091369 - | proteasome subunit beta TERM 1349 2092060 - 2092040 - G 73 -9.7 -3.95435 | overlap 2092035 2092042 CGCCGGAAAAGACAA CAGCCACGA TCG TCGTGGCTT CGGGAGTCAAGTGGG TERM 1350 2092058 - 2092042 - G 74 -12.3 -3.56378 | overlap 2092040 2092035 CCGGAAAAGACAACA GCCACGA TCG TCGTGGC TTCGGGAGTCAAGTG TERM 1351 2092227 - 2092266 + r 95 -17.8 -3.91028 | opp_overlap 2092217, overlap 2092228 AGACACGCGACTCCC TTCGGAGGTGCCCCGTCC ACGT GGACGGGGCACCGCGGAC TTGTTCGTTTGCCTT TERM 1352 2092228 - 2092265 + r 100 -21.3 -2.93532 | opp_overlap 2092217, overlap 2092227 GACACGCGACTCCCT TCGGAGGTGCCCCGTCC ACGT GGACGGGGCACCGCGGA CTTGTTCGTTTGCCT Tfu_1791 2092595 - 2092392 - | hypothetical protein Tfu_1792 2092716 - 2093099 + | calcium-binding EF-hand TERM 1353 2093151 - 2093125 - T 100 -20.9 -5.14563 | opp_overlap 2093147 CCCCCCACGAAAAAA GGTGGGGGCCG ACCCG CGGCCCCCACC AGTGCAGCACTGTGG Tfu_1793 2094786 - 2093167 - | hypothetical protein Tfu_1794 2096160 - 2094859 - | major facilitator family transporter TERM 1354 2095631 - 2095613 - G 70 -8.8 -3.86916 | CACGAGTAGAGGAAA TCGTTGCC CAC GGCAGCGA TCAGGCTGAAGGACC Tfu_1795 2096318 - 2097877 + | helix-turn-helix, Fis-type Tfu_1796 2099440 - 2097905 - | putative proteasome component TERM 1355 2100737 - 2100710 - R 100 -19.9 -4.1523 | opp_overlap 2100704 2100700 GCCAAGCAGAAAGAA GGGCCTGCCGG GGATGT CCGGCAGGCCC ACCAAGTCGCTTGTT Tfu_1799 2101938 - 2101318 - | hypothetical protein Tfu_1800 2102367 - 2102155 - | hypothetical protein Tfu_1801 2102898 - 2102383 - | helix-hairpin-helix DNA-binding motif-containing protein TERM 1356 2103069 - 2103030 - R 86 -12.7 -3.85817 | AGTTGTGTGCAGAAA CCCCCGGCGGCGTGGGC GCACCA GTCCACGCCGCCGCCAG AAGAACACAGCACAG TERM 1357 2103295 - 2103269 - R 74 -5 -4.58085 | overlap 2103270 2103271 AGAGCCACAAAGAAA TCCCTGCTCAAG GCG CCAGAGCAGGAG GGTCGAAAAACACCT TERM 1358 2103388 - 2103359 - R 91 -16.5 -3.75153 | opp_overlap 2103361, overlap 2103361 GTGGTTGAATGCAAA GAGCCCCCGAGAT GCTG ATCTCGGGGGCTT TTCCACGCCTACAAG TERM 1359 2103386 - 2103361 - R 100 -19.1 -3.46068 | opp_overlap 2103361, overlap 2103359 GGTTGAATGCAAAGA GCCCCCGAGAT GCTG ATCTCGGGGGC TTTTCCACGCCTACA TERM 1360 2103361 - 2103386 + r 100 -19.1 -4.08767 | opp_overlap 2103361 2103359 GGTTGAATGCAAAGA GCCCCCGAGAT GCTG ATCTCGGGGGC TTTTCCACGCCTACA Tfu_1802 2103596 - 2103405 - | hypothetical protein TERM 1361 2103606 - 2103620 + r 70 -2.1 -4.62069 | ATGCATGTTCTCCCG CCTTA CGCGA TGAGG TTTTTCAGGTAGGCC Tfu_1803 2104447 - 2103608 - | helix-hairpin-helix DNA-binding motif-containing protein Tfu_1804 2104775 - 2104996 + | hypothetical protein Tfu_1805 2105060 - 2105497 + | hypothetical protein Tfu_1806 2105494 - 2106444 + | hypothetical protein Tfu_1807 2106444 - 2106713 + | hypothetical protein Tfu_1808 2106719 - 2107849 + | putative methyltransferase TERM 1362 2107861 - 2107891 + T 86 -3.2 -5.12617 | overlap 2107856 2107871 CTAACCCGAATCCGG GCTGAACCCCTG AATTTCC CGGGAGTTCAAC TTTTTTACATGCTTG TERM 1363 2108664 - 2108637 - T 100 -19.9 -4.1523 | opp_overlap 2108631 2108627 GCCAAGCAGAAAGAA GGGCCTGCCGG GGATGT CCGGCAGGCCC ACCAAGTCGCTTGTT Tfu_1809 2110432 - 2108678 - | vesicle-fusing ATPase TERM 1364 2110160 - 2110147 - G 76 -8.1 -4.25104 | opp_overlap 2110157 GGGCTCTGAGGAAAA CTCCG AACC CGGAG GGCGGCTGGGAGAGG Tfu_1810 2111520 - 2110624 - | tRNA (adenine-58-N(1)-) methyltransferase Tfu_1811 2111660 - 2112448 + | polyphosphate glucokinase Tfu_1812 2112917 - 2112531 - | hypothetical protein TERM 1365 2113909 - 2113880 - g 86 -13.5 -3.86015 | opp_overlap 2113871 GAGGCTGCTCACAAA CTGCGCGGCGAGG TGCA CCCCACTGCGCAG GCGTGGCTGTCCTGT Tfu_1813 2113064 - 2114398 + | helix-hairpin-helix DNA-binding motif-containing protein Tfu_1814 2114449 - 2114874 + | hypothetical protein Tfu_1815 2116185 - 2115034 - | hypothetical protein Tfu_1816 2116249 - 2117091 + | hypothetical protein Tfu_1817 2117100 - 2117810 + | LuxR response regulator receiver Tfu_1818 2118008 - 2119435 + | hypothetical protein TERM 1366 2119457 - 2119505 + T 81 -16.7 -2.64794 | gap 1 GCTGGAGCCGGGACA GGGGCAGCC-GCGGCAGAGTGC CGGGGA GTGCTCAACCGCCGGCTGCCCC TGGTCTGCGGTTCAG Tfu_1819 2121298 - 2119517 - | ATPase components of various ABC-type transport systems contain duplicated ATPase Tfu_1820 2122376 - 2121363 - | putative peptide transport system permease protein TERM 1367 2121618 - 2121640 + g 79 -7 -4.42464 | overlap 2121610 2121638 GAGCGTGGGGCGCAG GCCGTGTT TGAGGAT GACACGGC TTTCTTTGAGGCCTT TERM 1368 2122378 - 2122435 + r 91 -20.5 -2.53382 | gap 1, overlap 2122391 ATGTATCTCAGCATT GCGGTCGGCGCTGGCCTGGG-CGAACCG TGG CTGTTCGGCCCAGGCCAGCGCCTTCACC TGCCTTCCCGATACT Tfu_1821 2124229 - 2122466 - | putative peptide transport system substrate-binding protein Tfu_1822 2125329 - 2124304 - | oligopeptide transport integral membrane protein TERM 1369 2125040 - 2125057 + g 72 -4.1 -4.56597 | gap 1, overlap 2125036 2125040 GTCGGGTCGATCCCG CTCC-ACG GGT CGTTGGGG TTTTTGAGGACGCCC TERM 1370 2125742 - 2125712 - R 87 -14.6 -3.58726 | overlap 2125714 TCCGCGGACACACAA CAGGGACCCGCCCG TGC CGGGCGAGGCCCTC AACACTGTGAGCAGA TERM 1371 2125740 - 2125714 - R 93 -17.2 -3.37198 | overlap 2125712 CGCGGACACACAACA GGGACCCGCCCG TGC CGGGCGAGGCCC TCAACACTGTGAGCA Tfu_1823 2126228 - 2125767 - | hypothetical protein TERM 1372 2126287 - 2126300 + r 71 -3.7 -4.56597 | overlap 2126288 TCTCCCCTAGTGGAC GCCGC TTAA GCGGA TTTTTCCCGACAACG Tfu_1824 2127009 - 2126341 - | HAD family hydrolase Tfu_1825 2130482 - 2127006 - | methionine synthase (B12-dependent) Tfu_1826 2130827 - 2131672 + | hypothetical protein TERM 1373 2131688 - 2131725 + T 100 -28.5 -3.05765 | overlap 2131680 CCGCTGCGGTACAGC TGCCGGTGGCCCGTCCC GGCC GGGGCGGGCCACCGGCG TGTCTGTGTGCGGTT Tfu_1827 2132159 - 2131740 - | hypothetical protein Tfu_1828 2133380 - 2132250 - | hypothetical protein Tfu_1829 2133865 - 2133380 - | hypothetical protein Tfu_1830 2134953 - 2133847 - | hypothetical protein Tfu_1831 2136890 - 2134950 - | HSP90 family heat shock protein TERM 1374 2135911 - 2135898 - G 93 -5.9 -5.26316 | opp_overlap 2135909, overlap 2135899 2135900 GCAGCGCACAAAAAA CGCCC ACTC GGGCA GCAGGTCGGTGACGT TERM 1375 2136091 - 2136067 - G 79 -10.7 -4.08767 | TCCAGCGGTGCAAAA CCGAACACTGC CTG GCAGTAGTCGG CGAGCGCGGCGCGGC cysS 2138147 - 2136909 - | cysteinyl-tRNA synthetase Tfu_1833 2139328 - 2138507 - | hypothetical protein TERM 1376 2139402 - 2139432 + H 71 -7.4 -4.19678 | opp_overlap 2139368, overlap 2139395 CCGTAGGCTCTGGCT GCGCGCCGCGGC TCCGATT GTCGCAGCACGC TTTCTTCCAGTATGG TERM 1377 2140948 - 2140930 - g 70 -13.1 -3.28712 | GGTCTCCGGGGACAA CGCGGCC TCCGT GGCCGCG GTCGCCCACACTCTG Tfu_1834 2139464 - 2141887 + | ATPase, E1-E2 type Tfu_1835 2142651 - 2141902 - | hypothetical protein Tfu_1836 2143245 - 2142679 - | hypothetical protein TERM 1378 2143104 - 2143119 + g 78 -6.8 -4.56597 | CAACGCGTTCCGCCA GCGCAG CCAC CTGTGC TTTTTCCAAGACGAC Tfu_1837 2144009 - 2143308 - | putative phosphatase TERM 1379 2143592 - 2143630 + g 100 -20.2 -3.96148 | GCGTGTTGTAGTCGT GCACGGCCGAGACCGCGC GGT GCGCGGTCTCGGCGAGGC TTTCTCCTCCGGGGA uppP 2144898 - 2144020 - | undecaprenyl pyrophosphate phosphatase Tfu_1839 2145060 - 2146016 + | putative oxidoreductase TERM 1380 2146005 - 2146030 + F 75 -10.3 -3.90112 | overlap 2146017 GCTGACGCGTCGGCT GCCGCGGTGTG ACCG CGGGCCGCGGC TTTGGTTGCGGCGCC Tfu_1840 2146128 - 2147873 + | hypothetical protein Tfu_1841 2148700 - 2147948 - | putative 3-ketoacyl-CoA reductase Tfu_1842 2149539 - 2148775 - | enoyl-(acyl carrier protein) reductase TERM 1381 2149284 - 2149342 + g 90 -20.2 -3.16683 | TGGAGTGGACGATGC CGTCGAGCCCGTCGACGTGCTCGGCGAC CCG GTCGGCGAGGGTGTCGAGGTGCTCGTCG TTGGTGACGTCCAGT Tfu_1843 2150285 - 2149581 - | 3-oxoacyl-[acyl-carrier-protein] reductase TERM 1382 2150030 - 2150046 + g 71 -10.1 -3.71848 | CTTCTTCGCTCATGA GGGCCAG CAA CTGGTCC TTGTTGATGCCCGCG Tfu_1844 2151477 - 2150458 - | hypothetical protein TERM 1383 2151869 - 2151839 - R 93 -3.2 -5.28942 | gap 1, overlap 2151833 2151842 TATCGGAAAGAAAAA GATTTCCGGCACG CGACAC CGGGCCGGGA-TC TCCCATTCCGCGTAG TERM 1384 2152063 - 2152044 - R 73 -9.2 -3.87373 | overlap 2152045 GACAGGGCTCATAAA GGCGGGAC TCAC GTCCCGCA CGCACCGCTACCGGC TERM 1385 2152062 - 2152045 - R 71 -12.7 -2.92102 | overlap 2152044 ACAGGGCTCATAAAG GCGGGAC TCAC GTCCCGC ACGCACCGCTACCGG Tfu_1845 2152734 - 2152087 - | LuxR response regulator receiver Tfu_1846 2153981 - 2152731 - | Signal transduction histidine kinase TERM 1386 2153591 - 2153547 - G 100 -25.8 -3.2614 | gap 1, opp_overlap 2153542 CATGGTGTAGACGAA CGCCAGCGCCGCGCTGTGGGC GGCC GCCCACAGCGCGA-GCGGGCG CCACCGGTTGGTGAA Tfu_1847 2154213 - 2154971 + | peptide ABC transporter ATPase Tfu_1848 2154975 - 2157500 + | putative ABC transporter integral membrane protein TERM 1387 2157509 - 2157555 + F 93 -19.5 -2.79796 | gap 2, overlap 2157511 2157548 CCAGTAGCCGCTGTC GTGG-GC-GTGCCCCGGCGCCCT GCC AGGGTGCCGGGGCGCCGCGCTGC TGTCCTGCGGTGGCG TERM 1388 2157511 - 2157552 + F 100 -22.3 -2.66634 | gap 1, overlap 2157509 2157548 AGTAGCCGCTGTCGT GGGC-GTGCCCCGGCGCCCT GCC AGGGTGCCGGGGCGCCGCGC TGCTGTCCTGCGGTG Tfu_1849 2157649 - 2158050 + | hypothetical protein Tfu_1850 2158848 - 2158072 - | dolichyl-phosphate beta-D-mannosyltransferase TERM 1389 2158136 - 2158157 + g 78 -8.7 -4.35518 | overlap 2158138 GGACGCAGCGCTGAC TCGACCTGG ACTG CCAGGTCCA TTTTGCTGTGGCCTT Tfu_1851 2159724 - 2158930 - | regulatory protein, DeoR TERM 1390 2159401 - 2159434 + g 72 -15.3 -2.90075 | gap 1 TTCGGCGGCCAGTGC CGCGGTCG-CCTCGCC CGG GCCGAGGACGATCGCG TCTCCTTCCGCGACC TERM 1391 2159822 - 2159797 - R 84 -6.7 -4.77438 | opp_overlap 2159797, overlap 2159799 ATTCATCAGCAAAAA CGGACCCCGTG GGCG CGCAGGGTCTG TTCTATCGCCTCATC Tfu_1852 2159966 - 2159787 - | hypothetical protein TERM 1392 2160088 - 2160054 - R 73 -15.1 -2.51872 | gap 1, overlap 2160053 2160049 GTCAGCAGAAGATAG CGCGGGGGA-CAGG ACGGACTG CCTGATCCCCCGCG AGGTCATGCCGTAGC Tfu_1853 2161345 - 2160092 - | putative transporter Tfu_1854 2162240 - 2161482 - | regulatory protein, DeoR TERM 1393 2162272 - 2162287 + H 100 -9 -5.4251 | AGAACTTGTTCGTTT TCGCCT TATT AGGCGA TTTTTTGTGTGTGAA TERM 1394 2163060 - 2163083 + G 75 -5.2 -4.63486 | gap 1, overlap 2163065 CCGCCCGCCCGGTCA CGGTGGCCGTC CAC GACG-CCTCTG TTTTGTTAAACCAAT Tfu_1855 2162294 - 2163148 + | 4'-phosphopantetheinyl transferase TERM 1395 2165229 - 2165171 - g 82 -19.5 -2.6563 | gap 2, opp_overlap 2165227, overlap 2165168 2165167 CCCTCCAAGAACGGA CGCGCGGCCCGCGTCCCATCCTGCTGCGC TAC GAGCA-CGGGGTGGGCCACGGGCCGCGC- GCGGTCAGCCGCGCG Tfu_1856 2163292 - 2165352 + | prolyl oligopeptidase TERM 1396 2165482 - 2165508 + F 100 -20.9 -3.63627 | TCATCTGATCCGCGC GCCGCCGAGGC CCTGT GCCTCGGCGGC TTTCCCCTCTCCACG Tfu_1857 2165550 - 2166737 + | hypothetical protein TERM 1397 2166800 - 2166816 + F 75 -4.4 -4.66987 | gap 1, overlap 2166812 GGCTAGCCTTAGTTC CGCGTCA GCGC TG-CGCG TTTTGTTGCGCTATC Tfu_1858 2166869 - 2167735 + | hypothetical protein Tfu_1859 2168366 - 2168073 - | hypothetical protein Tfu_1860 2169332 - 2168511 - | iron-chelator utilization protein Tfu_1861 2170673 - 2169342 - | enterobactin exporter EntS Tfu_1862 2171178 - 2170765 - | aspartate alpha-decarboxylase TERM 1398 2170815 - 2170843 + g 71 -10.9 -3.65046 | CGGGGACCGGCTCAG CCAGGTCGTCGCC CAG GGCGACGATGCGG TTGTTGGCGTCCACG Tfu_1863 2171573 - 2171349 - | putative protein MbtH Tfu_1864 2172720 - 2171635 - | iron(III) dicitrate transport permease Tfu_1865 2176758 - 2172724 - | amino acid adenylation TERM 1399 2174099 - 2174126 + g 86 -12 -4.15833 | gap 1 AGCACGGCGGTGATC TCCGC-GGGTTCG ACG CGCACCCCGCGGA TTTTCACCTGGTCGT TERM 1400 2176540 - 2176510 - G 70 -12.7 -3.33696 | gap 2 CTGCCGGGGAATGAA CTGG-ACG-GGGCGT TCC ACGCCCTCGTACCAG ATTCCGGCGCGCAGC Tfu_1866 2180007 - 2176783 - | amino acid adenylation TERM 1401 2179381 - 2179335 - G 70 -15.1 -2.70932 | gap 2 GCGCTGCGGGAAGCA CCCGGGTCGTCCGGCGGGGCGGC CGA GCCGTCCCG--GAACGTCCCGGA GCGACCAGGCACGGT Tfu_1867 2190893 - 2180004 - | non-ribosomal peptide synthase:amino acid adenylation TERM 1402 2190672 - 2190712 + g 74 -11 -3.70902 | gap 1 GGCACGGATCTCCTG CACGGCGGTGTCGCCCCGG GCCA CCGG-GCGGGACCGCAGCG TTTCGCTGTCCCGGA Tfu_1868 2191178 - 2190924 - | isochorismatase Tfu_1869 2192525 - 2191209 - | putative peptide monooxygenase Tfu_1870 2193194 - 2192529 - | isochorismatase Tfu_1871 2194822 - 2193191 - | 2,3-dihydroxybenzoate-AMP ligase Tfu_1872 2196024 - 2194843 - | isochorismate synthase Tfu_1873 2196882 - 2196100 - | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase TERM 1403 2196709 - 2196752 + g 74 -13.1 -3.60971 | gap 1, overlap 2196721 CGCGTAGCCTTTTCC GCGCTGCCCGGCCTG-CGCC AGGCC GGTGACGGTCTGGGCAGTGC TTTCGGGGTTGACGT Tfu_1874 2198066 - 2197332 - | hypothetical protein Tfu_1875 2199136 - 2198063 - | hypothetical protein Tfu_1876 2200436 - 2199423 - | putative oxidoreductase Tfu_1877 2200592 - 2200936 + | hypothetical protein Tfu_1878 2201922 - 2201095 - | enoyl-CoA hydratase Tfu_1879 2202223 - 2202011 - | transcriptional regulator Tfu_1880 2203975 - 2202377 - | ABC transporter ATPase Tfu_1881 2205448 - 2204141 - | hypothetical protein Tfu_1882 2205956 - 2205549 - | hypothetical protein TERM 1404 2206168 - 2206178 + H 74 -5.4 -4.54047 | CGGGAACGACTGTCC CCAT ACG ATGG TTTTGTCTGGGCTCC Tfu_1883 2206560 - 2206859 + | putative regulatory protein TERM 1405 2206933 - 2206977 + T 100 -20.1 -4.17958 | gap 1, opp_overlap 2206955 2206957, overlap 2206935 CGACCATCAGGGTCA TTCACCGTGGCGCCC-CGAC AAGCAC GTCGAGGGCGCCACGGTGTG TTTCTTACCCATCTT TERM 1406 2206935 - 2206975 + T 100 -24.9 -3.68324 | gap 1, opp_overlap 2206955 2206957, overlap 2206933 ACCATCAGGGTCATT CACCGTGGCGCCC-CGAC AAGCAC GTCGAGGGCGCCACGGTG TGTTTCTTACCCATC Tfu_1884 2208309 - 2207017 - | hypothetical protein TERM 1407 2208769 - 2208756 - g 76 -2.3 -4.8048 | overlap 2208757 CCCCGAGATCAAAAA CCAGC TTGA GCTGT CCAATACGGCTCTGG TERM 1408 2209101 - 2209127 + G 86 -14.4 -3.8505 | overlap 2209102 GGGCGGCCTGCTGGG CGCAGCCGCGGT CGG ACTGCGGCTGCC TTTCCTGGTCTTCCT TERM 1409 2209102 - 2209126 + G 80 -17.9 -2.90307 | overlap 2209101 GGCGGCCTGCTGGGC GCAGCCGCGGT CGG ACTGCGGCTGC CTTTCCTGGTCTTCC Tfu_1885 2208619 - 2209830 + | putative integral membrane protein TERM 1410 2209872 - 2209824 - T 71 -12.5 -3.23393 | gap 2, overlap 2209822 CCGCACCTCAGAAGA CGGGTGACCCCGCAGGTACGCAG GCACA CCGCGT-C-TGCGGGGTCAGCAG AAACGGGATCCGATC Tfu_1886 2210632 - 2209913 - | hypothetical protein Tfu_1887 2211987 - 2210686 - | hypothetical protein TERM 1411 2210865 - 2210912 + g 100 -20.5 -3.53012 | gap 1 GTTCTGCGAGGCGGA CCGCGCTGGCCTGGCGGCGGGC GGCGA GCTCGGC-CCGGGCCCGCGCGG TTTCCGCGACCGGCC TERM 1412 2212433 - 2212411 - g 81 -4.1 -4.87807 | overlap 2212414 CGAAGAGATCAAAAA GAACGATGA TGGGC TCAACGTCC GCAAGCGCATCATCG TERM 1413 2212448 - 2212414 - g 79 -7.2 -4.51891 | overlap 2212411 AGAGATCAAAAAGAA CGATGATGGGCTCA ACGTCCG CAAGCGCATCATCG ACATCTACTCCAAAC Tfu_1888 2212289 - 2213983 + | putative nitrite/sulphite reductase Tfu_1889 2214131 - 2214913 + | phosphoadenosine phosphosulfate reductase Tfu_1890 2214910 - 2215677 + | putative secreted protein TERM 1414 2215690 - 2215725 + F 88 -14 -3.82202 | gap 1, overlap 2215691 2215708 TAGCAGCATCTCCTC TCGGGGCATCCGGGTGT GCA GCAC-CGGGTGCCCCGC TTCTGTTTCCGGCTC TERM 1415 2215691 - 2215724 + F 87 -17.5 -2.88839 | gap 1, overlap 2215690 2215708 AGCAGCATCTCCTCT CGGGGCATCCGGGTGT GCA GCAC-CGGGTGCCCCG CTTCTGTTTCCGGCT TERM 1416 2217731 - 2217770 + G 74 -12.8 -3.61398 | gap 1, overlap 2217732 TGTGCGCACCCTGTC CCGGCTGCGCCGGGAGCAC CCG GTGTTC-CGGCGTCGCCGC TTCTTCCAGGGGGCC TERM 1417 2217732 - 2217769 + G 74 -16.3 -2.76696 | gap 1, overlap 2217731 GTGCGCACCCTGTCC CGGCTGCGCCGGGAGCAC CCG GTGTTC-CGGCGTCGCCG CTTCTTCCAGGGGGC Tfu_1891 2216031 - 2218154 + | glycogen debranching enzyme GlgX TERM 1418 2218236 - 2218281 + T 90 -16.9 -3.39505 | gap 1 GGATAGCGCGCGGAC CGCGACAGGGCGGGCTGGAG AGGACGG CTCCGGCCCGTCCCGTC-CG TTCTCACTCTGCGGT Tfu_1892 2218746 - 2218285 - | hypothetical protein Tfu_1893 2218842 - 2219264 + | methionine sulfoxide reductase B Tfu_1894 2219329 - 2219982 + | phosphatidylserine decarboxylase Tfu_1895 2220077 - 2220739 + | putative phosphatidylserine synthase Tfu_1896 2221525 - 2220824 - | hypothetical protein Tfu_1897 2222955 - 2221522 - | UDP-galactopyranose mutase TERM 1419 2221779 - 2221802 + g 80 -18.2 -2.83894 | ACAGGTCTGCAAGGT CGCTGGTGGC CCGG GCCACCAGCG TGTCGTCGTCGTAGT TERM 1420 2223800 - 2223818 + G 72 -13.8 -3.1372 | overlap 2223790 2223798 TGGACGACGGCGACT CCCCCGGC TTC GTCGGGGG TCTTGCTGCGGGCTG Tfu_1898 2223061 - 2224062 + | putative lipoprotein TERM 1421 2224062 - 2224104 + T 91 -16.8 -3.76482 | opp_overlap 2224053 CCAAGACCGGGACTA GCCCCGTGCCCGTCCGGCCG TTT CGGACGGGCACGCACTGGGC TTCTTCGTGGTCTCA Tfu_1899 2225202 - 2224117 - | uroporphyrinogen decarboxylase TERM 1422 2224852 - 2224878 + g 77 -11.4 -3.83502 | AAGGTCGCGGATCGG CTCGGCGACGAC CGG GCCGACGCCGGG TTTGATGTCGAGGTC Tfu_1900 2225313 - 2225894 + | hypothetical protein TERM 1423 2225917 - 2225935 + F 70 -11.6 -3.41878 | GGTGGGGCTTGTACG GCCCCGCC TCG GCCGGGGC TTGTCGGTTGGGGCG TERM 1424 2226255 - 2226232 - g 70 -15.2 -2.71144 | opp_overlap 2226215 TACCTGGTCCAACTA CGCCGGGCCG GGGC CGGCACGGCG CTGATCGACCCGGTG Tfu_1901 2225998 - 2227260 + | HRDC:3'-5' exonuclease Tfu_1902 2227348 - 2228280 + | hypothetical protein Tfu_1903 2228442 - 2229644 + | thiolase Tfu_1904 2229641 - 2231734 + | short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase Tfu_1905 2232242 - 2231817 - | putative regulatory protein Tfu_1906 2232731 - 2232345 - | helix-hairpin-helix DNA-binding motif-containing protein Tfu_1907 2233411 - 2232929 - | hypothetical protein TERM 1425 2233425 - 2233439 + H 70 -5.6 -4.24786 | ATGTCCTCTCCTTCG CAGGGA TAG TCCCCG TTTGTCTATTGTGAA Tfu_1908 2233597 - 2233890 + | hypothetical protein Tfu_1909 2234000 - 2234134 + | hypothetical protein Tfu_1910 2234179 - 2234679 + | MccB protein Tfu_1911 2234699 - 2235172 + | hypothetical protein TERM 1426 2235222 - 2235182 - T 100 -25.8 -3.78904 | opp_overlap 2235182 CAGTAAATCGAATAA TCCCCTTTAGAGACCAGA GAGAA TCTGGTCTCTAAAGGGGA TTTTATAGACAACGA TERM 1427 2235182 - 2235222 + T 100 -25.8 -4.36914 | opp_overlap 2235182 CAGTAAATCGAATAA TCCCCTTTAGAGACCAGA GAGAA TCTGGTCTCTAAAGGGGA TTTTATAGACAACGA TERM 1428 2235230 - 2235274 + T 75 -4.1 -4.6951 | opp_overlap 2235235 2235236 AAAGGGGATTTTATA GACAACGAAGGGGTGGAAG TTATTCC CATCCACCCCCTCACGGTC TTTATTTTCGCTGCT TERM 1429 2235269 - 2235235 - T 71 -10 -3.59698 | opp_overlap 2235230, overlap 2235236 GGATTTTATAGACAA CGAAGGGGTGGAAG TTATTCC CATCCACCCCCTCA CGGTCTTTATTTTCG TERM 1430 2235440 - 2235486 + T 88 -15.7 -3.36803 | overlap 2235441 GAGATTGCTCTGCCG CGTGCCCTGGACGCCGGTTCG CGGGC CGCCCGGGCGTCCAGGGCGCC TTATCGGTCGGGTTG TERM 1431 2235441 - 2235485 + T 89 -19.2 -2.6176 | overlap 2235440 AGATTGCTCTGCCGC GTGCCCTGGACGCCGGTTCG CGGGC CGCCCGGGCGTCCAGGGCGC CTTATCGGTCGGGTT Tfu_1912 2237702 - 2235507 - | MmpL family protein TERM 1432 2238300 - 2238286 - g 82 -9.2 -4.4261 | opp_overlap 2238288 2238292 GCTGCAACACGAAAA GCAGCG GTT CGCCGC GATCTTCCTCTCCCT Tfu_1913 2237834 - 2238613 + | putative transcriptional regulator Tfu_1914 2238702 - 2239991 + | metalloprotease Tfu_1915 2241556 - 2240177 - | ferredoxin/ferredoxin--NADP reductase, putative Tfu_1916 2241926 - 2241648 - | hypothetical protein TERM 1433 2241949 - 2242007 + r 78 -13.6 -3.23393 | opp_overlap 2241979 2242003, overlap 2241950 2241951 TCTTTCACCTTCCCA GGACCGCTACCCGCTGGGGAGCGCCACC AAC GATGGTGCTCCCCAGCGGGCAAAGCCCG TATTCTCCGGTCAGG TERM 1434 2241950 - 2242006 + r 81 -17.1 -2.53822 | opp_overlap 2241979 2242003, overlap 2241949 2241951 CTTTCACCTTCCCAG GACCGCTACCCGCTGGGGAGCGCCACC AAC GATGGTGCTCCCCAGCGGGCAAAGCCC GTATTCTCCGGTCAG Tfu_1917 2243931 - 2242018 - | 1-deoxy-D-xylulose-5-phosphate synthase TERM 1435 2242320 - 2242294 - G 70 -13 -3.25823 | GGCTTCCGACACCAA CGCCGGGTCCAA CGG TTTGACCCAGCG CGGGTCCACGACGGT TERM 1436 2243842 - 2243886 + g 84 -4.9 -5.06451 | gap 1, opp_overlap 2243838 2243842 CTGGGAAATGAGGAA CTCCCGGATTTCC-GCCGCC AATTGG GGAAGCTGGGAGTCGGGGAG TTTTTTCAGGTCGTC Tfu_1918 2244754 - 2244116 - | G/U mismatch-specific uracil-DNA glycosylase Tfu_1919 2245602 - 2244796 - | hypothetical protein Tfu_1920 2246932 - 2245679 - | putative ABC transporter transmembrane transport protein Tfu_1921 2247717 - 2246932 - | ABC-type sugar transport system ATPase component TERM 1437 2247739 - 2247775 + r 84 -17.9 -2.78596 | overlap 2247729 TCCTCGTGGTGATCC GCTGTTCGGGGGCCGGA CTG TCCGGCCCCCGATCCGG TCTCCTGGGAGCCTC TERM 1438 2247842 - 2247898 + r 73 -14.5 -2.52676 | gap 3, overlap 2247825 2247824 GCGGGTGCCGCTCCA GT-CGTCGCG-GGG-CCCGCCGGTTTCC GGTG GGAGGCCTGCGGAACCCGCGCGACGTAC TCCGTTAGGAGCCTG Tfu_1922 2249021 - 2247903 - | solute-binding protein Tfu_1923 2250445 - 2249276 - | putative transcriptional repressor protein Tfu_1924 2250977 - 2251552 + | hypothetical protein TERM 1439 2251690 - 2251719 + T 80 -12.1 -3.80733 | gap 1, overlap 2251691 TGGCGGGCCCTGTGG GTCGCCCCGGGCCT GGT GGGCCCGGGG-GAG TTCTTCTAGGCTGAC TERM 1440 2251691 - 2251718 + T 80 -15.6 -2.88118 | gap 1, overlap 2251690 GGCGGGCCCTGTGGG TCGCCCCGGGCCT GGT GGGCCCGGGG-GA GTTCTTCTAGGCTGA Tfu_1925 2254484 - 2251734 - | aconitate hydratase Tfu_1926 2255821 - 2254880 - | hypothetical protein TERM 1441 2255743 - 2255717 - G 71 -2.8 -4.62069 | opp_overlap 2255717 2255728 GTCGGAGCGGAAAAA GCCGTCGAAGCC CAG GTCTTCACTGGC TTTTGCGACGGTGAG Tfu_1927 2257143 - 2255884 - | 23S rRNA methyltransferase/RumA Tfu_1928 2257352 - 2258026 + | putative potassium transporter Tfu_1929 2258026 - 2258715 + | putative potassium uptake protein TERM 1442 2259603 - 2259584 - g 70 -12.8 -3.31144 | CCCCTACTTCGACAA CGCGCCCG TCTA CGGGCACG GCCCCTCCCTGGAAG Tfu_1930 2258811 - 2259926 + | putative monooxygenase TERM 1443 2260202 - 2260216 + G 78 -5.7 -4.60889 | overlap 2260188 ACCGCCTCCTACAGC GGTCT GTTCA AGACC TTTTTCGACGTCGTT Tfu_1931 2259923 - 2260534 + | hypothetical protein Tfu_1932 2261321 - 2260578 - | hypothetical protein Tfu_1933 2261547 - 2262647 + | proteinase inhibitor I4, serpin Tfu_1934 2263460 - 2262738 - | hypothetical protein TERM 1444 2262843 - 2262827 - G 74 -13.7 -3.31144 | opp_overlap 2262824 GCCGCAGTTCGAGAA GGTCCCG CGG CGGGACC GGGTGGTGTCCGCGG TERM 1445 2263158 - 2263185 + g 72 -13.4 -3.23216 | gap 1, opp_overlap 2263110 CTTGGGGGCGGCGAA CGGCTGGACCTGC AGC GC-GGTCCTGCCG TTGATGATCGTCACC Tfu_1935 2264045 - 2263506 - | deoxyuridine 5'-triphosphate nucleotidohydrolase valS 2266706 - 2264061 - | valyl-tRNA synthetase Tfu_1937 2266793 - 2267077 + | hypothetical protein Tfu_1938 2267971 - 2267123 - | hypothetical protein TERM 1446 2268071 - 2268106 + r 100 -26.3 -2.98823 | opp_overlap 2268071 CCGTCGGAGAGAGAA CGGACGAGACCCCGG TGCGGC CCGGGGTCTCGTCCG TGTCTGTGACGCAAG TERM 1447 2268106 - 2268071 - R 100 -26.3 -3.58726 | opp_overlap 2268071 CCGTCGGAGAGAGAA CGGACGAGACCCCGG TGCGGC CCGGGGTCTCGTCCG TGTCTGTGACGCAAG Tfu_1939 2268451 - 2268152 - | hypothetical protein TERM 1448 2268378 - 2268396 + g 72 -14.6 -2.8547 | TTGTCTACCCGGCGC GCCTGCAG TTC CTGCAGGC TGTCCTCTCCCAGGT Tfu_1940 2270223 - 2268913 - | sensor histidine kinase Tfu_1941 2270873 - 2270220 - | response regulator receiver TERM 1449 2270420 - 2270455 + g 82 -18.4 -2.90194 | gap 1 CCGCGAACTCTTTAG GGGT-GAGCGAGACGGG CCG CCCGTCTCGCTCCACCG TGTGGTTGGCAGGGT TERM 1450 2270949 - 2270910 - R 100 -16.4 -4.48987 | opp_overlap 2270910 2270911, overlap 2270911 TGGTGATAAGGAAAA GGCCGCTGCCGGCGCATC CCCC AACACACCGGCAGCGGCG TTTATCTCCGGCTGC TERM 1451 2270910 - 2270949 + r 75 -9.2 -4.04206 | opp_overlap 2270910 2270911, overlap 2270911 TGGTGATAAGGAAAA GGCCGCTGCCGGCG CATCCCCCAACA CACCGGCAGCGGCG TTTATCTCCGGCTGC TERM 1452 2270948 - 2270911 - R 100 -19.9 -3.2891 | opp_overlap 2270911 2270910, overlap 2270910 GGTGATAAGGAAAAG GCCGCTGCCGGCGCATC CCCC AACACACCGGCAGCGGC GTTTATCTCCGGCTG TERM 1453 2270911 - 2270948 + r 71 -12.7 -3.02202 | opp_overlap 2270910 2270911, overlap 2270910 GGTGATAAGGAAAAG GCCGCTGCCGGCG CATCCCCCAACA CACCGGCAGCGGC GTTTATCTCCGGCTG TERM 1454 2271179 - 2271136 - R 85 -11.8 -4.17048 | gap 1, overlap 2271139 GCGGCCCGAAAAGAA GGA-GTCGCGGTCGGCG CATCCCCCAAC CGCCGACCGCGACGTTC ACCCCGCACATCTCA TERM 1455 2271175 - 2271139 - R 89 -18.1 -3.10579 | overlap 2271136 GCCCGAAAAGAAGGA GTCGCGGTCGGCG CATCCCCCAAC CGCCGACCGCGAC GTTCACCCCGCACAT Tfu_1942 2271876 - 2271352 - | hypothetical protein Tfu_1943 2272711 - 2271911 - | inositol-1(or 4)-monophosphatase TERM 1456 2272003 - 2272039 + g 74 -12.2 -3.62597 | GCATGGCGTTATTCG GCGGGGTGC-CGCGCAGC CCC GCCACGCGAGC-CCCCGC TTCTTCCGCGATCAA Tfu_1944 2273001 - 2274197 + | putative secreted protein hemH 2275287 - 2274256 - | ferrochelatase TERM 1457 2276636 - 2276656 + G 79 -11.2 -3.9712 | overlap 2276616 AGATGCACACCCGCA CCTTGTCC TACTT GGACAAGG TTTATCCTCGGCTGC Tfu_1946 2275453 - 2276754 + | FAD-linked oxidoreductase Tfu_1947 2277094 - 2278086 + | hypothetical protein Tfu_1948 2279795 - 2278131 - | hypothetical protein Tfu_1949 2280310 - 2279792 - | hypothetical protein TERM 1458 2279843 - 2279872 + g 70 -8.5 -3.84246 | overlap 2279838 AGCTAGTTCTTCGGA GAGCTGCCGGG CCTGCGCT TCCGGCAGCCC TTTGATCGTTGAGGA Tfu_1950 2280550 - 2281107 + | PBP family phospholipid-binding protein Tfu_1951 2281443 - 2283224 + | hypothetical protein TERM 1459 2283233 - 2283272 + T 100 -29.4 -4.45485 | overlap 2283234 CCGGTAGGACCACGT TCACGCGGGGCGGGGAAC CGCG GTTCCCCGCCCCGCGTGC TTTTCTCCGTCTGCT TERM 1460 2283234 - 2283271 + T 100 -32.9 -3.26568 | overlap 2283233 CGGTAGGACCACGTT CACGCGGGGCGGGGAAC CGCG GTTCCCCGCCCCGCGTG CTTTTCTCCGTCTGC TERM 1461 2283509 - 2283530 + T 71 -12.9 -3.00923 | opp_overlap 2283505, overlap 2283501 GGAAGACGAAGGGTG GGCGGCCCG CTAG CGGGCCGCG TGTCTACTCTTCGGA Tfu_1952 2283758 - 2283534 - | hypothetical protein Tfu_1953 2285609 - 2284461 - | bifunctional RNase H/acid phosphatase TERM 1462 2284593 - 2284607 + g 71 -10 -3.73775 | CGGGGCGAGCATGGC CTGCTG GAC CAGCAG TTTGATCGGGGTGAC Tfu_1954 2286363 - 2285620 - | hypothetical protein TERM 1463 2285887 - 2285911 + g 90 -12.7 -4.43844 | CAGCTCGTCCTTGAT CCGCAGCACCG CTT CGGAGCGGCGG TTTTCTGCGTCATCC Tfu_1955 2287246 - 2286410 - | hypothetical protein Tfu_1956 2287417 - 2288298 + | endonuclease IV Tfu_1957 2288393 - 2288719 + | hypothetical protein Tfu_1958 2289447 - 2288689 - | hypothetical protein TERM 1464 2292806 - 2292784 - g 74 -11.2 -3.78934 | CTCGTTCTACAAGAA CGACCCGCTG TGG CCGCAGGTCG AGGCACACCTGAACG Tfu_1959 2289980 - 2292934 + | cellulose 1,4-beta-cellobiosidase TERM 1465 2293012 - 2293053 + T 87 -17.2 -2.90813 | opp_overlap 2293038, overlap 2293009 CGCCCTCCACCACCC CCCTGGGGCCGTCCGGCG CACCAA CACCGGACGGCCCCAGAC TCCTTTCACGGCCTG Tfu_1960 2293381 - 2293091 - | hypothetical protein Tfu_1961 2293556 - 2294563 + | translation factor SUA5 TERM 1466 2294569 - 2294585 + F 70 -2.1 -4.59773 | overlap 2294564 2294570 GGCGCACTGACCTCT CCCCCTG GGG CAAGGGA TTTTTCCGCATAGAC Tfu_1962 2294665 - 2295174 + | hypothetical protein TERM 1467 2295191 - 2295233 + F 95 -15.7 -4.06904 | gap 1 CCGCAGCACCAGCAG CCCTGACAGCAGCGGGCACT CAGC GGTGCC-GTTGCTGTCAGAG TTTCTCGTTCGATGC Tfu_1963 2295508 - 2296251 + | hypothetical protein TERM 1468 2296761 - 2296730 - T 100 -23.8 -3.37493 | gap 1 GCCTCAATACAGCAA GACGCCCGGG-GCCG TAC CGGCTCCCGGGCGTC TCCGAGTGCGTATCG Tfu_1964 2297573 - 2297103 - | putative thiol-specific antioxidant protein TERM 1469 2297229 - 2297217 - G 72 -9.1 -3.96327 | AGTGTCGATCAGAAA GCTGC CGC GCAGC GCTACCCCTTTGGTT TERM 1470 2297414 - 2297430 + g 70 -12.3 -3.30124 | CGCTCATGCACTCGT GGAGCTG CCG CAGCTCC TTGTCGCAGATACCG Tfu_1965 2298147 - 2297677 - | hypothetical protein Tfu_1966 2298680 - 2298252 - | hypothetical protein Tfu_1967 2298846 - 2300546 + | hypothetical protein Tfu_1968 2301428 - 2300568 - | allophanate hydrolase subunit 2 Tfu_1969 2302073 - 2301468 - | hypothetical protein Tfu_1970 2302850 - 2302086 - | hypothetical protein TERM 1471 2302335 - 2302385 + g 83 -8.8 -4.56775 | overlap 2302336 CACCAGGGTGCCTTC GGGGGTGTAGGCGCGGTCCGCGAA CGC TTCGCGGACTACGCGTAGCCCGGC TTTTTCCGCCAAGGT Tfu_1971 2303686 - 2302940 - | hypothetical protein TERM 1472 2303997 - 2304012 + r 70 -4.6 -4.39954 | opp_overlap 2303997, overlap 2303991 GTCACCTCACAAGAA GTGCCG CTCC CGGGAC TTTCTGTTCTTCTTC Tfu_1972 2305188 - 2304067 - | hypothetical protein TERM 1473 2305038 - 2305048 + g 83 -8.2 -4.57569 | overlap 2305023 2305037 CGATCGCGGGGCGGC CCCG GTG CGGG TTTTTGAACCAGTCG Tfu_1973 2305452 - 2306411 + | acyl-carrier-protein S-malonyltransferase Tfu_1974 2306411 - 2307364 + | 3-oxoacyl-(acyl carrier protein) synthase III TERM 1474 2307519 - 2307468 - g 73 -7.9 -4.11216 | gap 1, overlap 2307506 GGCCTACTCGGAAAA GGAGATCCTGGACGGTCTCGCCGA AATCA TCGACGAGATCG-CCGGTGTCCCC GCGGCCGAGGTCACC acpP 2307451 - 2307690 + | acyl carrier protein TERM 1475 2307701 - 2307743 + F 71 -14.1 -2.78596 | gap 2, opp_overlap 2307695 2307691 AGTAACGGAGCTGAG C-CGTCG-GCCCGCCGACGCC GCA GCCGTCGGCGGGCACGCTGAG TGTCGTCCGGGACTA Tfu_1976 2307827 - 2309065 + | 3-oxoacyl-[acyl-carrier-protein] synthase II TERM 1476 2309069 - 2309108 + F 100 -14.8 -4.43859 | overlap 2309071 CGCCGTCCTTGACCG GTGCTGGGCGCGCCCGCC ACGC GGTGGGCGCGCTCTGCTG TTTTCTGGGATTGTC TERM 1477 2309071 - 2309106 + F 100 -21.8 -3.81948 | overlap 2309069 CCGTCCTTGACCGGT GCTGGGCGCGCCCGCC ACGC GGTGGGCGCGCTCTGC TGTTTTCTGGGATTG TERM 1478 2309695 - 2309735 + G 70 -12.6 -3.36749 | overlap 2309702 GGTACGCGTTCGACA CTGCGCGGGTCTCCCCG-GA CCT TCTCGTGGAGACC-GCGCCG TTCCTGTTCCGGATC Tfu_1977 2309238 - 2310407 + | EAL domain-containing protein Tfu_1978 2311561 - 2310659 - | hypothetical protein TERM 1479 2312068 - 2312125 + H 73 -9.8 -3.87815 | gap 3, overlap 2312061 2312070 TGGGCAGGCGCGGTC CG-GCG-GGGCGCGGTTCTGCTCG-CTGG GTG CCGGGTGGGCAGCGCCGCGGCCGTGCTCG TTTCTCGCGGTGCGA TERM 1480 2312395 - 2312427 + H 88 -10.4 -4.36914 | overlap 2312397 GCCTGCCTCGCCGGT GCGCTGCGCCGGCC GACAG GGCCTGCCCAGCCC TTTTATCCACAGCCG TERM 1481 2314363 - 2314398 + G 74 -11.8 -3.74361 | gap 1, overlap 2314366 GACTCGCTGCGGCCG CTGCTGCGCCGGCTCGG CGC CCAAGCCGGCG-ACCGG TTGTTCATCACTGTC Tfu_1979 2312533 - 2314734 + | hypothetical protein Tfu_1980 2315325 - 2314807 - | hypothetical protein TERM 1482 2315442 - 2315416 - R 100 -21.6 -3.83998 | overlap 2315434 CCACGGCACAGCAAA CGCCCGCGGTGC ATA ACACCGCGGGCG CGGGTACGGCGTGGT Tfu_1981 2315839 - 2315477 - | hypothetical protein Tfu_1982 2316318 - 2315836 - | SUF system FeS assembly protein Tfu_1983 2317605 - 2316331 - | cysteine desulfurase Tfu_1984 2318369 - 2317608 - | Iron-regulated ABC transporter ATPase subunit SufC Tfu_1985 2318713 - 2318381 - | putative dioxygenase Tfu_1986 2319860 - 2318706 - | Iron-regulated ABC transporter permease protein SufD Tfu_1987 2321275 - 2319863 - | Iron-regulated ABC transporter membrane component SufB Tfu_1988 2322069 - 2321272 - | transcriptional regulator Tfu_1989 2322333 - 2323262 + | ABC-type multidrug transport system ATPase componen Tfu_1990 2323262 - 2324047 + | putative integral membrane transport protein Tfu_1991 2324136 - 2324462 + | hypothetical protein TERM 1483 2324553 - 2324526 - T 89 -18.4 -3.01712 | TGCCGGTGCGGAACA GCCGCGTCCGCG CGGG CTCGGACGCGGC CGCCGCGGTCACCTG Tfu_1992 2325566 - 2324562 - | ornithine carbamoyltransferase TERM 1484 2325554 - 2325541 - G 76 -8.1 -4.37092 | overlap 2325543 AGTTCCTTGACAAAA CTGCG ATTA CGCAG GTTGAACGCCATCGC Tfu_1993 2326871 - 2325642 - | arginine deiminase Tfu_1994 2326990 - 2327892 + | putative integral membrane protein Tfu_1995 2328338 - 2329393 + | putative integral membrane transport protein Tfu_1996 2330678 - 2329350 - | putative integral membrane protein Tfu_1997 2331542 - 2330790 - | TetR family transcriptional regulator TERM 1485 2330902 - 2330922 + g 74 -13.9 -3.31144 | GCTGCGGCGGCCTCC GGGCGGCGC GCG GCGCCGGCC TTGTCGGGGTAGAGC Tfu_1998 2331773 - 2333299 + | putative acyl-CoA synthetase, long-chain fatty acid:CoA ligase Tfu_1999 2333306 - 2334481 + | acyl-CoA dehydrogenase TERM 1486 2334605 - 2334550 - T 73 -12.5 -3.40622 | gap 2, overlap 2334548 2334551 TATCCCGAAAAGATA GGCGATCCGCCTGGAGTGCGCCAGCGG CACG CCCCTGGCGCACTCC--GCAGCAGGCC GGAACACGTCCGCCC TERM 1487 2334607 - 2334551 - T 70 -13.6 -2.63891 | gap 1, overlap 2334548 2334550 ATCCCGAAAAGATAG GCGATCCGCC-TGGAGTGCGCCAGCGG CACG CCCCTGGCGCACTCCGCAGCAGGCCGG AACACGTCCGCCCTC Tfu_2000 2335495 - 2334872 - | hypothetical protein TERM 1488 2335549 - 2335600 + r 100 -22.4 -2.80816 | opp_overlap 2335560 2335563, overlap 2335563 TCGGCCGCCTCCCGA AGCGGCAACGATAACGGGAGGCTG CGCG CAGCCTCCCGTTATCGTCGTCACC TCTCGTCGATCAGCG TERM 1489 2335589 - 2335560 - R 100 -20.9 -2.73542 | opp_overlap 2335549 2335563, overlap 2335563 CCGAAGCGGCAACGA TAACGGGAGGCTG CGCG CAGCCTCCCGTTA TCGTCGTCACCTCTC TERM 1490 2335563 - 2335586 + r 93 -18.2 -3.44229 | opp_overlap 2335560 2335563, overlap 2335549 AAGCGGCAACGATAA CGGGAGGCTG CGCG CAGCCTCCCG TTATCGTCGTCACCT TERM 1491 2335586 - 2335563 - R 93 -18.2 -3.51597 | opp_overlap 2335563 2335549, overlap 2335560 AAGCGGCAACGATAA CGGGAGGCTG CGCG CAGCCTCCCG TTATCGTCGTCACCT Tfu_2001 2336587 - 2335610 - | protoheme IX farnesyltransferase Tfu_2002 2337142 - 2339265 + | transketolase TERM 1492 2339273 - 2339302 + F 91 -17.9 -3.29144 | gap 1, overlap 2339273 2339275 GCAACTGACCGTTGT GG-GGAGGGTCGCC GTC GGCGGCCCTCCTCC TTCTCCAAGGAGTGG TERM 1493 2339273 - 2339301 + F 91 -20.3 -2.57344 | overlap 2339273 2339275 GCAACTGACCGTTGT GGGGAGGGTCGCC GTC GGCGGCCCTCCTC CTTCTCCAAGGAGTG TERM 1494 2339275 - 2339299 + F 93 -19.3 -2.82623 | overlap 2339273 2339273 AACTGACCGTTGTGG GGAGGGTCGCC GTC GGCGGCCCTCC TCCTTCTCCAAGGAG Tfu_2003 2339326 - 2340432 + | transaldolase Tfu_2004 2340580 - 2342214 + | glucose-6-phosphate isomerase Tfu_2005 2342256 - 2343860 + | glucose-6-phosphate 1-dehydrogenase Tfu_2006 2344014 - 2344940 + | hypothetical protein TERM 1495 2345624 - 2345654 + G 70 -12.5 -3.29325 | gap 1, overlap 2345622 2345618 CCGATCCAGGTGCCT GCG-GCGGGCGCGC GGGG GCGTTCCCGCACGC TGTTCCTTCTCGACC Tfu_2007 2344937 - 2345722 + | 6-phosphogluconolactonase TERM 1496 2345777 - 2345749 - T 93 -18.1 -3.59979 | opp_overlap 2345749 CCGTTTGAGCGGAAA GGGGCGGGCAGCA GGA CGCTGTCCGCCCC TTGTCTCCTCCCATC TERM 1497 2345749 - 2345777 + T 100 -19.6 -3.54951 | opp_overlap 2345749 CCGTTTGAGCGGAAA GGGGCGGGCAGC AGGAC GCTGTCCGCCCC TTGTCTCCTCCCATC Tfu_2008 2347070 - 2346348 - | putative secreted glycosyl hydrolase Tfu_2009 2349452 - 2347443 - | cellulose-binding family II protein TERM 1498 2348976 - 2349002 + g 74 -11.4 -3.78934 | GCCTGGTTCTTCAGG CCCGCCGGGCTC CTC GGGGCCGCCGGG TTCTTCTGGCCCGCC Tfu_2010 2349728 - 2349982 + | hypothetical protein TERM 1499 2350026 - 2350067 + F 100 -20.1 -3.02511 | gap 1, overlap 2350028 2350032 CGCGCCCCTCGGCCC CATGTCCCGGCCGGCGCCGC TCT GCGGCGCCGGCCGCT-CGTG TCTTCCCACCCTCCC TERM 1500 2350028 - 2350065 + F 85 -16.9 -3.07013 | gap 1, overlap 2350026 2350032 CGCCCCTCGGCCCCA TGTCCCGGCCGGCGCCGC TCT GCGGCGCCGGCCGCT-CG TGTCTTCCCACCCTC TERM 1501 2350032 - 2350062 + F 100 -25.4 -2.7535 | overlap 2350028 2350026 CCTCGGCCCCATGTC CCGGCCGGCGCCGC TCT GCGGCGCCGGCCGC TCGTGTCTTCCCACC TERM 1502 2350090 - 2350100 + F 82 -4 -4.99861 | overlap 2350094 ACCCTCCCCTCCTAT TACT GAG AGTA TTTTTCTCGTTACTC Tfu_2011 2350166 - 2351668 + | putative cationic amino acid transporter Tfu_2012 2353047 - 2351824 - | allantoate amidohydrolase TERM 1503 2352547 - 2352502 - G 72 -13.2 -3.15544 | GTGGAGTTCCACGAA GACGCCGATGCGCGCCAACC GCTCGG GGTCGGCGCCCATCCGCTCC GGATCCAAACCGGCC TERM 1504 2353275 - 2353314 + r 88 -17.9 -3.07816 | gap 1, opp_overlap 2353273 2353274 AGCCGGCGAAGAACG TGACGGGCGCCCTCCAGG ACGGA TC-GGGGGGCGCCCGTCG TTCCGTGCGTGGGAC TERM 1505 2353697 - 2353664 - R 100 -14.5 -5.5112 | gap 1, overlap 2353666 CCCAGCAAGAAAAAA GAGCCGCCCCG-GCGC ATC GCACGCGGGACGGCAC CGCTCCGCTGTCCGG TERM 1506 2353695 - 2353666 - R 100 -15.7 -4.39002 | gap 1, overlap 2353664 CAGCAAGAAAAAAGA GCCGCCCCG-GCGC ATC GCACGCGGGACGGC ACCGCTCCGCTGTCC TERM 1507 2353837 - 2353798 - R 77 -15.1 -2.87211 | ATCCGGGCCCAGACA CGCCAG-TGCCCCCGCCGG ACAT CCGACGGGGGCATCTGA-G ACCTGGTCGCACGTC Tfu_2013 2354294 - 2353923 - | putative electron transport protein secG 2354645 - 2354406 - | preprotein translocase subunit SecG tpiA 2355658 - 2354873 - | triosephosphate isomerase pgk 2356852 - 2355665 - | phosphoglycerate kinase Tfu_2017 2357971 - 2356964 - | glyceraldehyde-3-phosphate dehydrogenase TERM 1508 2357998 - 2358010 + r 73 -9.1 -3.90922 | CCTCACGTGTCGTCT GCGTC GTC GACGC TTGTTTCCGACGCGT Tfu_2018 2359361 - 2358381 - | hypothetical protein Tfu_2019 2360524 - 2359532 - | hypothetical protein Tfu_2020 2361489 - 2360605 - | hypothetical protein TERM 1509 2361212 - 2361202 - G 71 -2.4 -4.57569 | overlap 2361204 2361207 TGACGCCTCCAAAAA CACG ACG CGGG CCCCGATCCCGCGGC uvrC 2363480 - 2361510 - | excinuclease ABC subunit C TERM 1510 2362352 - 2362374 + g 75 -5.4 -4.57073 | overlap 2362339 2362353 CGCGCTGGCTCTTGT GGCGGGCCAG GGT CTGCTCCGCG TTTTTGAGCACGGTC Tfu_2022 2363889 - 2365028 + | small-conductance mechanosensitive channel Tfu_2023 2365460 - 2365044 - | putative iron-sulphur protein uvrA 2368629 - 2365792 - | excinuclease ABC subunit A Tfu_2025 2369923 - 2368910 - | putative transporter membrane protein Tfu_2026 2371317 - 2370220 - | putative glycosyl transferase Tfu_2027 2372933 - 2371314 - | hypothetical protein Tfu_2028 2373940 - 2373017 - | hypothetical protein Tfu_2029 2374969 - 2373953 - | hypothetical protein Tfu_2030 2375685 - 2374966 - | hypothetical protein Tfu_2031 2376180 - 2375710 - | hypothetical protein Tfu_2032 2378013 - 2376310 - | DNA repair protein RecN ppnK 2379060 - 2378080 - | inorganic polyphosphate/ATP-NAD kinase Tfu_2034 2379976 - 2379176 - | hemolysin A Tfu_2035 2380253 - 2380080 - | hypothetical protein Tfu_2036 2381024 - 2380257 - | hypothetical protein Tfu_2037 2381369 - 2381728 + | hypothetical protein Tfu_2038 2382226 - 2383230 + | HAD family hydrolase Tfu_2039 2383636 - 2383208 - | hypothetical protein Tfu_2040 2383856 - 2384851 + | Zn-dependent hydrolase Tfu_2041 2385494 - 2385006 - | 8-oxo-dGTPase TERM 1511 2385564 - 2385521 - R 100 -20.4 -4.2803 | overlap 2385522 TACGTGAAGGGAAAA GGTGCGTTCCGGTACAGCCA CTCC TGGCCGTACCGGAACGCAAT AGATGAGTGAATCGG TERM 1512 2385563 - 2385522 - R 100 -23.9 -3.16336 | overlap 2385521 ACGTGAAGGGAAAAG GTGCGTTCCGGTACAGCCA CTCC TGGCCGTACCGGAACGCAA TAGATGAGTGAATCG Tfu_2042 2386646 - 2385597 - | hypothetical protein TERM 1513 2386694 - 2386671 - R 95 -10.3 -4.77986 | GTAAACAGTCAAAAA CGCTGCCAC TTGTCC GTAGCAGCG CGAAATGATTCAAAG TERM 1514 2386808 - 2386771 - R 100 -14.9 -5.05301 | opp_overlap 2386768, overlap 2386775 AAAGAAGTAGAAAAA CAAAGTGGGGGTGGAAC GGTT GTTCCACCCCCACTCAC ACATGTGTACGGCGG TERM 1515 2386804 - 2386775 - R 100 -22.3 -5.00267 | opp_overlap 2386768, overlap 2386771 AAGTAGAAAAACAAA GTGGGGGTGGAAC GGTT GTTCCACCCCCAC TCACACATGTGTACG TERM 1516 2388139 - 2388150 + r 74 -2.2 -4.7254 | CGTCTTACGACTTCG CACG GACC TGTG TTTTTAGTAAACAGT Tfu_2043 2394226 - 2392883 - | tyrosyl-tRNA synthetase TERM 1517 2394396 - 2394435 + r 81 -11.5 -4.08692 | gap 3 CCGCCTGCGCGCCAT GGC-GCTGGTCCCGGC-TGG GCG CCGTGCCGGGACC-GCAGTC TTTTCAGAGGGCTTG Tfu_2044 2394792 - 2394439 - | hypothetical protein Tfu_2045 2396852 - 2394789 - | ATP-binding region, ATPase-like TERM 1518 2396415 - 2396435 + g 75 -4.7 -4.56597 | overlap 2396433 GAGGGCGGTCTCCCG GTCGATC TTCCGCT GGTCGAC TTTTTCGCGGAGCGC Tfu_2046 2397879 - 2396953 - | hypothetical protein TERM 1519 2397774 - 2397731 - G 74 -12.5 -3.64822 | gap 1 ATCTCGGTAGCGAAA CCGCTCCT-GTCGCCCTCGG GTGTG CCAAAGGCGACGAGGACCAG GGGTGGCGTGCCCAC Tfu_2047 2398567 - 2397974 - | putative ATP/GTP-binding protein Tfu_2048 2398970 - 2398584 - | hypothetical protein Tfu_2049 2399389 - 2398967 - | hypothetical protein Tfu_2050 2401871 - 2399580 - | ATP-binding region, ATPase-like TERM 1520 2401007 - 2401051 + g 78 -13.4 -3.54424 | CGAGGGTCTCGTTGA CCCTGACCGCGTCGGTGTCC CATAC GGCCACGGCCGTGGGCAGGG TTTCGGACCATCCGC TERM 1521 2401680 - 2401696 + g 72 -4.4 -4.59773 | gap 1, overlap 2401640 2401639 2401677 GAGCGCGGCATAGAG GCG-GGA GCCT TCCTCGC TTTTTGCGGCTGCCG Tfu_2051 2403464 - 2402034 - | argininosuccinate lyase TERM 1522 2403547 - 2403501 - R 93 -19.5 -3.01712 | gap 1 TGGTTTGGTGGAACA CGGGACAGGCGTCCCGCACACC CCGG GGTGTGCGGGACGCC-ACCTCA GTGCGGGCTCCGGGT Tfu_2052 2404761 - 2403562 - | argininosuccinate synthase TERM 1523 2404804 - 2404787 - R 74 -11.3 -3.67611 | CCTAGTGCAACAGAA CGGATGC GGCG GCATCCG GGTCGATGGTCGTGT Tfu_2053 2405365 - 2404832 - | arginine repressor Tfu_2054 2406573 - 2405362 - | acetylornithine aminotransferase Tfu_2055 2407478 - 2406570 - | acetylglutamate kinase TERM 1524 2406890 - 2406871 - G 73 -12.8 -3.53012 | opp_overlap 2406858 TTGGCGGCGCCCAAA GCCACGGC CAGT GCCGCGGC CGCGGTGTCGGCGTT argJ 2408626 - 2407475 - | bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein argC 2409651 - 2408623 - | N-acetyl-gamma-glutamyl-phosphate reductase Tfu_2058 2411215 - 2409773 - | hypothetical protein Tfu_2059 2411888 - 2411388 - | regulatory protein, MarR TERM 1525 2411526 - 2411549 + g 86 -2.2 -5.14965 | overlap 2411516 AACGTGCTTGGTCCT GGCCTGTTCC GCGA GGTCCAGCCC TTTTTTGGTGAGCGT pheT 2414648 - 2412153 - | phenylalanyl-tRNA synthetase subunit beta pheS 2415766 - 2414648 - | phenylalanyl-tRNA synthetase subunit alpha Tfu_2062 2416964 - 2415888 - | PAS/PAC sensor signal transduction histidine kinase Tfu_2063 2418207 - 2417380 - | putative rRNA methylase rplT 2418602 - 2418225 - | 50S ribosomal protein L20 Tfu_2065 2418958 - 2418767 - | 50S ribosomal protein L35P TERM 1526 2418931 - 2418943 + g 81 -3.3 -4.86385 | overlap 2418932 GGAAACGCCTACTAG CCCCA CTG TGGGA TTTGTTTTTCGGCAT TERM 1527 2419039 - 2419076 + r 86 -14.8 -3.54297 | gap 1, opp_overlap 2419039 CGGCGCATGAAGAAA GCGGGGT-GCGCGACCC GGACA GGGCCGCGCGACCGCGC TTGTCCTTCATACGT TERM 1528 2419076 - 2419039 - R 100 -17 -4.24342 | gap 1, opp_overlap 2419039 CGGCGCATGAAGAAA GCGGGGT-GCGCGACCC GGACA GGGCCGCGCGACCGCGC TTGTCCTTCATACGT Tfu_2066 2419675 - 2419136 - | translation initiation factor 3 TERM 1529 2419816 - 2419793 - R 91 -11.6 -4.56133 | overlap 2419811 CCGGAACAACGAAAA CCCCGCCAGC TAAT GCAAGCGGGG TCGAACCACCACAGG Tfu_2067 2420900 - 2420052 - | shikimate dehydrogenase TERM 1530 2420688 - 2420700 + g 75 -4.8 -4.57073 | CACCTCATCTGCGAG GGTC AGCGC GACC TTTTTGAGCGGCATG Tfu_2068 2423022 - 2420965 - | putative integral membrane protein Tfu_2069 2423498 - 2423019 - | Holliday junction resolvase YqgF alaS 2426253 - 2423584 - | alanyl-tRNA synthetase Tfu_2071 2427626 - 2426421 - | hypothetical protein TERM 1531 2426719 - 2426706 - G 71 -2.4 -4.62336 | AGTGCACCGCAAAAA CAAC GTCAGG GTTG GGTCAGCCGCTGGTG TERM 1532 2427828 - 2427843 + r 81 -7.6 -4.56597 | opp_overlap 2427842, overlap 2427837 2427842 TCGTCGTGGGTCAAG GCTCTT CACG AAGAGC TTTTTGACAAAAAGA Tfu_2072 2428432 - 2428172 - | hypothetical protein Tfu_2073 2428821 - 2428429 - | putative secreted protein Tfu_2074 2429251 - 2431104 + | tyrosine protein kinase:Serine/threonine protein kinase TERM 1533 2431101 - 2431135 + F 72 -11.3 -3.54424 | overlap 2431102 CCCGCTGCCCACGGC GTGAGTGGGGGCGCG CCCGT CGCGCCTCCACCCGG TTTCCGGGAATCCGC TERM 1534 2431102 - 2431134 + F 75 -14.8 -2.72511 | overlap 2431101 CCGCTGCCCACGGCG TGAGTGGGGGCGCG CCCGT CGCGCCTCCACCCG GTTTCCGGGAATCCG Tfu_2075 2431210 - 2432856 + | tyrosine protein kinase:Serine/threonine protein kinase Tfu_2076 2433411 - 2432878 - | hypothetical protein Tfu_2077 2434616 - 2433402 - | hypothetical protein Tfu_2078 2437519 - 2434613 - | hypothetical protein Tfu_2079 2438955 - 2437516 - | hypothetical protein TERM 1535 2437624 - 2437636 + g 70 -9.1 -3.84406 | GAGGACACGCATGTG GCGGA ACT TCCGC TTGTTGTAGTGCCCG Tfu_2080 2440037 - 2438955 - | hypothetical protein TERM 1536 2439293 - 2439303 + g 72 -4.6 -4.46212 | overlap 2439275 CCGCAGGGGTTGCGG CGGC TGT GCTG TTTTCTACTGGCACG Tfu_2081 2441908 - 2440583 - | recombination factor protein RarA Tfu_2082 2442597 - 2441977 - | phosphoesterase, PA-phosphatase related Tfu_2083 2444622 - 2442604 - | PAS/protein phosphatase 2C-like TERM 1537 2444322 - 2444353 + g 77 -10.8 -3.85864 | gap 1 GGATCGTCAGGTCGG GCCACTGTCGGGGGG CGG CGCCCCG-CAGTGCC TTGTTGTGCTGCTCC Tfu_2084 2445603 - 2445034 - | hypothetical protein TERM 1538 2445901 - 2445950 + r 71 -12 -3.18681 | gap 1, opp_overlap 2445897, overlap 2445905 ACACAAGCAGAGGGT GTCGTCACAGCCAGGGCCCGGCC TTGCC GGCCGGGCCCTG-CGGGGGTGGG TTGGTGGGGTTAGAG TERM 1539 2445905 - 2445946 + r 77 -15.8 -2.57092 | gap 1, opp_overlap 2445897, overlap 2445901 AAGCAGAGGGTGTCG TCACAGCCAGGGCCCGGCC TTGCC GGCCGGGCCCTG-CGGGGG TGGGTTGGTGGGGTT Tfu_2085 2446400 - 2445960 - | protease inhibitor precursor TERM 1540 2446929 - 2446892 - R 91 -16.3 -3.59979 | gap 1, opp_overlap 2446892 CCGCCCCACGCGAAA GCCCGCCGGGTGAGGC GAGCGCT GCCTG-CCCGGCGGGC TTCCCTGACGCGTAC TERM 1541 2446892 - 2446929 + r 93 -19.2 -3.05816 | gap 1, opp_overlap 2446892 CCGCCCCACGCGAAA GCCCGCCGGGTGAGGCG AGCGC TGCCT-GCCCGGCGGGC TTCCCTGACGCGTAC aspS 2448692 - 2446953 - | aspartyl-tRNA synthetase TERM 1542 2448614 - 2448593 - G 74 -10.8 -3.71552 | opp_overlap 2448599 2448600 AGTCCAGGAAGACAA CACCGCCG TGGTCG CGGCGGCG GGCCACCCAGCCCGC Tfu_2087 2449555 - 2448881 - | hydrolase Tfu_2088 2449963 - 2451264 + | hypothetical protein TERM 1543 2451284 - 2451325 + T 89 -18.7 -3.0263 | gap 1, overlap 2451308 2451310 GTCTGCCCTGGACTG TTGTGGTGGCCGCACCCCGG GAT CCGGGC-GCGGCCACCACGC TGTTACGAGGATGCT Tfu_2089 2451720 - 2451328 - | hypothetical protein Tfu_2090 2454213 - 2451769 - | RelA/SpoT protein TERM 1544 2454160 - 2454130 - G 73 -12.5 -3.53012 | opp_overlap 2454159 CTGGCCTGGTGGAAA CGCCCCCGCAG GCACCTCAG CGGCGGGGGCG GGAGGCTCGGGGCGT Tfu_2091 2454989 - 2454459 - | adenine phosphoribosyltransferase Tfu_2092 2455450 - 2455142 - | protein translocase subunit yajC ruvB 2456639 - 2455584 - | Holliday junction DNA helicase B Tfu_2094 2457260 - 2456652 - | Holliday junction DNA helicase subunit RuvA ruvC 2457837 - 2457289 - | Holliday junction resolvase TERM 1545 2457661 - 2457684 + g 75 -5.2 -4.65895 | overlap 2457665 GGCGTCGGGCTGGTA GTCATCGAGC CACT GCTCGATCCC TTTTTCGATCCCCAG TERM 1546 2457940 - 2457908 - R 100 -22 -3.57144 | GGGGGTACCCGGAAA CACGCGCGCCCCGG ACAGG CCGGGGCGTGCGTG AGCGGCAGTCGACCA Tfu_2096 2458711 - 2457962 - | hypothetical protein Tfu_2097 2459319 - 2458714 - | glutamine amidotransferase subunit PdxT Tfu_2098 2459811 - 2459539 - | hypothetical protein Tfu_2099 2461005 - 2459917 - | pyridoxine biosynthesis protein Tfu_2100 2461598 - 2461044 - | hypothetical protein TERM 1547 2461235 - 2461213 - G 70 -8.3 -3.85698 | GTGTCGTTGTAGAAA CGGCGCGCG ATGTG CACGTGCCG GGCGGCCGCGTACGT Tfu_2101 2462734 - 2461595 - | phosphatidylinositol alpha-mannosyltransferase TERM 1548 2461843 - 2461804 - G 74 -15.1 -3.04144 | gap 1 CCCCGACCGGGAAGA GCGTCCCGGCA-GTACCG TCGCG CAGCACCTGCCGGAACGC AGGGATATCGCTGGC TERM 1549 2462202 - 2462160 - G 78 -12 -3.72695 | gap 2, overlap 2462161 ATGCGGCCCAGGAAA CCGAGCGCGCCGCCCGGTCC CGGCC AG-CCGGGCAGCGGG-TCGG CGTGGGCGTAGCGCC Tfu_2102 2463654 - 2462731 - | lipid A biosynthesis lauroyl acyltransferase Tfu_2103 2464334 - 2463657 - | putative membrane transferase Tfu_2104 2464737 - 2464345 - | hypothetical protein TERM 1550 2464544 - 2464518 - G 76 -13.6 -3.40403 | GGCTGTTGAGGAGAA GGGCCGCGGCAG CGT CTGCCCCGCCCC AGACCCGGCGCCGGT TERM 1551 2464589 - 2464637 + g 74 -11.5 -3.76125 | AGCATCTCCGTGCGG GCGCGGGCGCGCAGCGGCTCATC GAA GTTGAGCTCCTGCCAGGCTGCGC TTTGGATTCCGCTGC Tfu_2105 2465291 - 2464734 - | hypothetical protein TERM 1552 2465170 - 2465180 + g 72 -4.6 -4.43624 | opp_overlap 2465148, overlap 2465167 2465166 CCGTCGTCCGGTCCG CTCC CGT GGGG TTTGTTCTCTCCTTT TERM 1553 2465332 - 2465373 + r 81 -13 -3.60098 | gap 1, opp_overlap 2465333 2465336, overlap 2465333 TTGCAACGCAAGCAT AGAACCGGGCTGCCGCAGA AGTGG TCGG-GGCGGCCCGGTTCG TTTCAGGTCGGAGGT TERM 1554 2465372 - 2465333 - R 75 -14.3 -2.93991 | gap 1, opp_overlap 2465332 2465333, overlap 2465336 TGCAACGCAAGCATA GAACCGGGCTGCCGCAGA AGTGG TCGG-GGCGGCCCGGTTC GTTTCAGGTCGGAGG TERM 1555 2465333 - 2465372 + r 81 -16.5 -2.75844 | gap 1, opp_overlap 2465333 2465336, overlap 2465332 TGCAACGCAAGCATA GAACCGGGCTGCCGCAGA AGTGG TCGG-GGCGGCCCGGTTC GTTTCAGGTCGGAGG TERM 1556 2465369 - 2465336 - R 71 -10.2 -3.61062 | gap 1, opp_overlap 2465333 2465332, overlap 2465333 AACGCAAGCATAGAA CCGGGCTGCCGCAGA AGTGG TCGG-GGCGGCCCGG TTCGTTTCAGGTCGG Tfu_2106 2466167 - 2465388 - | hypothetical protein Tfu_2107 2467935 - 2466271 - | hypothetical protein TERM 1557 2468067 - 2468030 - R 72 -11.2 -3.53091 | overlap 2468034 AGCGTGCGCCGCAAA GCAACGGGGCCAGAGG CGAATC CCTCTAGCCCCGCAGG CAGCGTGGTTCCGGG TERM 1558 2468063 - 2468034 - R 93 -17.2 -3.51232 | overlap 2468030 TGCGCCGCAAAGCAA CGGGGCCAGAGG CGAATC CCTCTAGCCCCG CAGGCAGCGTGGTTC thrS 2470062 - 2468083 - | threonyl-tRNA synthetase Tfu_2109 2470116 - 2470457 + | hypothetical protein Tfu_2110 2470647 - 2471117 + | hypothetical protein TERM 1559 2471209 - 2471167 - f 84 -12 -4.04318 | opp_overlap 2471167 TCTAGACATGACAAA GCCCCAGGTGATCTACTGGT TAG ACCAGTGAGTAACCTGGAGC TTGTGGGCGATACTG TERM 1560 2471167 - 2471209 + F 73 -12 -3.30441 | opp_overlap 2471167 TCTAGACATGACAAA GCCCCAGGTGATCTACTGGT TAG ACCAGTGAGTAACCTGGAGC TTGTGGGCGATACTG Tfu_2111 2471763 - 2472179 + | putative regulator TERM 1561 2472312 - 2472353 + T 100 -20.3 -3.9941 | gap 1, opp_overlap 2472292 2472322 2472324 2472327, overlap 2472313 CCGCCACTATGCGGT AGGGCACAGAGAGTACCGGG ACT CCCGG-ATTCTCTGTGCCCG TTTCCTTCTCAGGGG TERM 1562 2472313 - 2472352 + T 100 -23.8 -2.99325 | gap 1, opp_overlap 2472292 2472322 2472324 2472327, overlap 2472312 CGCCACTATGCGGTA GGGCACAGAGAGTACCGGG ACT CCCGG-ATTCTCTGTGCCC GTTTCCTTCTCAGGG Tfu_2112 2473204 - 2472362 - | putative aminotransferase Tfu_2113 2473524 - 2473955 + | hypothetical protein TERM 1563 2474424 - 2474400 - f 81 -12.2 -3.91412 | opp_overlap 2474400 AGCACAGCTCAGAAA GCTCCCTTAC TCTCC GCAAGGGAGC TTTTTTCGTGCCCGC TERM 1564 2474400 - 2474424 + F 100 -10 -5.14563 | opp_overlap 2474400 AGCACAGCTCAGAAA GCTCCCTTAC TCTCC GCAAGGGAGC TTTTTTCGTGCCCGC Tfu_2114 2474645 - 2475157 + | gluconate kinase Tfu_2115 2476390 - 2475173 - | putative molybdopterin biosynthesis protein TERM 1565 2476636 - 2476659 + H 95 -13.2 -4.26903 | gap 1, overlap 2476624 CGTCCGCTCGGATTT GACGGTGCGGG TTT CCC-CACCGTC TTTTCATCCGGTGGA TERM 1566 2476841 - 2476880 + H 89 -13 -4.13343 | overlap 2476843 2476846 CCACCAGTGACTCTG GATGATCGGCCTGCTTTT GACG GAAAGCGGGCCGATTATG TTTTCCCGGCTTTCT TERM 1567 2476843 - 2476878 + H 90 -15.6 -3.65832 | overlap 2476841 2476846 ACCAGTGACTCTGGA TGATCGGCCTGCTTTT GACG GAAAGCGGGCCGATTA TGTTTTCCCGGCTTT TERM 1568 2476846 - 2476875 + H 95 -15.1 -3.95435 | overlap 2476843 2476841 AGTGACTCTGGATGA TCGGCCTGCTTTT GACG GAAAGCGGGCCGA TTATGTTTTCCCGGC TERM 1569 2476909 - 2476921 + H 70 -6.2 -4.24726 | CTCCTGGGTTGTCCG GGGC GACCA GCCC TTTTCCGGTTCTTCT Tfu_2116 2477293 - 2477829 + | PBP family phospholipid-binding protein TERM 1570 2477871 - 2477838 - f 84 -13.7 -3.60792 | GCCCTAACCGGGAAA GGGCTCGGGCCGCTC CTCG GAGCGGCCCGCTTCC GATGTCCGGGAACGG TERM 1571 2478338 - 2478358 + G 79 -4.5 -4.78149 | overlap 2478311 2478340 CGTTTCTCCCCGCTG CTGTGCGGC TTT GACGCGCTG TTTTTCAGTTGTGAG Tfu_2117 2477936 - 2478568 + | HAD family hydrolase Tfu_2118 2478733 - 2479176 + | hypothetical protein Tfu_2119 2479315 - 2479800 + | hypothetical protein Tfu_2120 2480407 - 2479814 - | hypothetical protein TERM 1572 2480469 - 2480451 - H 70 -5.8 -4.31329 | CCAAAAATGCCAAAA GGTCCCCG TAC CGCGGGCC TGATGGTTACCGTGT Tfu_2121 2480522 - 2481010 + | hypothetical protein Tfu_2122 2481090 - 2481515 + | hypothetical protein TERM 1573 2482556 - 2482543 - g 81 -8.1 -4.56597 | overlap 2482545 TCTCCCTCGGAAAAA TCCGC GGCT GCGGA GCCGACCGGGCGCTC Tfu_2123 2481774 - 2484029 + | hypothetical protein Tfu_2124 2484096 - 2484593 + | hypothetical protein Tfu_2125 2485215 - 2484604 - | putative hydrolase Tfu_2126 2486466 - 2485291 - | hypothetical protein Tfu_2127 2487056 - 2486463 - | hypothetical protein Tfu_2128 2490107 - 2487384 - | hypothetical protein TERM 1574 2488125 - 2488139 + g 93 -9.2 -5.15969 | opp_overlap 2488116 2488118 GAACCAGACCGAGTG GTCGGC GGT GCCGGC TTTTTTCGCTTCGGC Tfu_2129 2490302 - 2491198 + | putative sugar kinase TERM 1575 2491333 - 2491359 + F 78 -4.2 -4.77036 | overlap 2491331 2491327 CTTCGCTGCCGCACG GGCGGCGGGAGG GTG CCGGTCGTCGTC TTTTTCGTGGTGGCA Tfu_2130 2491761 - 2494037 + | hypothetical protein Tfu_2131 2494333 - 2496828 + | DNA topoisomerase IV subunit A TERM 1576 2496873 - 2496897 + F 78 -14.3 -3.28712 | opp_overlap 2496873 CCAGTGCTCGGATAA GGCCGTGCG CGTGGAT CGCACGGCC TTATCCGAGCCAGGC TERM 1577 2496897 - 2496873 - f 78 -14.3 -3.29144 | opp_overlap 2496873 CCAGTGCTCGGATAA GGCCGTGCG CGTGGAT CGCACGGCC TTATCCGAGCCAGGC TERM 1578 2497014 - 2497050 + G 72 -13.5 -3.16881 | CCGTACTTTCACACT GGCGGGCCTGCAGCCGG TGG CCGCCCGCGGGCTGGCC TTAGTGACCTGCATG Tfu_2132 2496952 - 2497455 + | carbonic anhydrase, putative Tfu_2133 2497537 - 2497863 + | hypothetical protein Tfu_2134 2500038 - 2497930 - | DNA topoisomerase IV subunit B Tfu_2135 2500396 - 2500620 + | hypothetical protein TERM 1579 2500675 - 2500636 - f 85 -16.4 -3.05844 | gap 1, opp_overlap 2500635 2500639 CCCCTCACCTGAAGA CGC-CCGGCGGCGATCCTC TGC GAGGGTCGCCGCCGATGTG TATTCGGGCAGGGGC TERM 1580 2500639 - 2500671 + F 100 -21.3 -3.09273 | opp_overlap 2500636, overlap 2500635 CTCACCTGAAGACGC CCGGCGGCGATCCTC TGC GAGGGTCGCCGCCGA TGTGTATTCGGGCAG TERM 1581 2501170 - 2501193 + G 78 -13.2 -3.65812 | gap 1 TCCGCGCGTCCTCTT GCCGAGGCACG TAC CGTGC-TCGGC TTGTCTTCGCGGCAG TERM 1582 2501501 - 2501546 + G 82 -14.7 -3.53012 | gap 1, overlap 2501489 TGACGGCCGTGGCCC GCGGCCGTCT-GGTGGTGGACT GCC GGTCGACCGCCTACGCGGCCGC TTTCCGGCCCGGCCC Tfu_2136 2501023 - 2501820 + | hypothetical protein Tfu_2137 2501863 - 2502216 + | hypothetical protein Tfu_2138 2503238 - 2502231 - | hypothetical protein Tfu_2139 2505395 - 2503545 - | RNA polymerase sigma factor Tfu_2140 2507632 - 2505566 - | PAS/protein phosphatase 2C-like Tfu_2141 2508335 - 2508583 + | hypothetical protein TERM 1583 2510154 - 2510185 + G 71 -10.9 -3.57144 | CCCGCCCAACCTGTG GTCCGCGG-CGCAGC GGCT GCT-CGACCGCGGGC TTTCGCGGTCCGAAG Tfu_2142 2508676 - 2510277 + | hypothetical protein TERM 1584 2510317 - 2510352 + T 93 -19.1 -3.14564 | gap 1 GGGGCACGGACCGCC CT-TCGGGGAGCGGGC AGTCC GCCCGCTCCCCGGCAG TTACTGCGCGGCTCC Tfu_2143 2511075 - 2510353 - | putative guanyltransferase Tfu_2144 2513551 - 2511143 - | ATPase TERM 1585 2512718 - 2512771 + g 82 -17.9 -3.05384 | opp_overlap 2512718, overlap 2512760 CCCGGAGAACACAAA GTGGCGCAGCGGCCGGTCGACGCTG TATC CCGCGTCGGCCCGCAGCCGGGCCGC TTCGATCGCGGCAGC TERM 1586 2512771 - 2512718 - G 95 -15.7 -4.27117 | opp_overlap 2512718 2512760 CCCGGAGAACACAAA GTGGCGCAGCGGCCGGTCGACGCTG TATC CCGCGTCGGCCCGCAGCCGGGCCGC TTCGATCGCGGCAGC TERM 1587 2512760 - 2512804 + g 85 -16.4 -3.57561 | gap 1, opp_overlap 2512718, overlap 2512718 TCCCGCGTCGGCCCG CAGCCGGGCCGCTTCGATCGC GGCA GCGATCGC-GCGGACCTGCTG TTTGACCGGTTCCAA TERM 1588 2513509 - 2513533 + g 85 -17.1 -3.12351 | opp_overlap 2513504, overlap 2513521 GTTCCAGAGAGGCCG CCCTGGGCCGC TGC GCGGCTCGGGG TTCGATCTGGCGCCC rnhB 2514396 - 2513701 - | ribonuclease HII TERM 1589 2515046 - 2515084 + G 73 -9.7 -3.86897 | gap 2 GCGAGCCACCTCCAA CTCTTCCACGGTGCTCCTC CCG GAGGAGCA--GTGGACGGG TTTCTACCCGGTGAG Tfu_2146 2514516 - 2515277 + | hypothetical protein TERM 1590 2515283 - 2515341 + T 85 -12.6 -4.14243 | gap 4, opp_overlap 2515293, overlap 2515283 2515294 CGAGCACTGACCTCG --GCCGCAAC-CAC-GTGCGGGGGTGGGCT TCC AGCCCACCCCCGCACTGTCTGTCGTGGCTG TTTTCCGATGGACTA TERM 1591 2515283 - 2515339 + T 100 -24.6 -3.6692 | gap 2, opp_overlap 2515293, overlap 2515283 2515294 CGAGCACTGACCTCG GCCGCAAC-CAC-GTGCGGGGGTGGGCT TCC AGCCCACCCCCGCACTGTCTGTCGTGGC TGTTTTCCGATGGAC TERM 1592 2515327 - 2515293 - T 100 -25.8 -2.70932 | opp_overlap 2515283 2515283 2515294 CCTCGGCCGCAACCA CGTGCGGGGGTGGGCT TCC AGCCCACCCCCGCACT GTCTGTCGTGGCTGT TERM 1593 2515294 - 2515326 + T 100 -29.3 -3.02947 | opp_overlap 2515293, overlap 2515283 2515283 CTCGGCCGCAACCAC GTGCGGGGGTGGGCT TCC AGCCCACCCCCGCAC TGTCTGTCGTGGCTG Tfu_2147 2516706 - 2515354 - | band 7 protein Tfu_2148 2518322 - 2516706 - | band 7 protein TERM 1594 2518260 - 2518288 + g 72 -13.2 -3.14132 | gap 1, overlap 2518259 GTCGCTGAGCACCTG GCGCGGATCGCCT CCTT GGGCGAT-CGCGC TTGCTGCCCCGCGCA TERM 1595 2518499 - 2518466 - R 100 -19.5 -4.09739 | overlap 2518467 GCAACCGTCCCAAAA TGCGCGAGGGCGGCC GGGT GGCCGCCCTCGCGGG ACGTGGCTGCGGGGA TERM 1596 2518498 - 2518467 - R 100 -23 -3.05522 | overlap 2518466 CAACCGTCCCAAAAT GCGCGAGGGCGGCC GGGT GGCCGCCCTCGCGG GACGTGGCTGCGGGG Tfu_2149 2521333 - 2518529 - | vitamin B12-dependent ribonucleotide reductase TERM 1597 2521242 - 2521288 + g 70 -3.7 -4.51196 | overlap 2521243 GTGTCGTAGGGGTGG ACTC-CAGGAGTGGTGAAGACGC GTT GGATCTTCACCCC-CCTGCGAGG TTTTCTGCCTTTACG Tfu_2150 2521917 - 2521456 - | transcriptional regulator NrdR Tfu_2151 2522685 - 2522143 - | peptidoglycan-binding LysM Tfu_2152 2522941 - 2523699 + | peptidase S24, LexA repressor Tfu_2153 2524712 - 2523900 - | hypothetical protein Tfu_2154 2525475 - 2524819 - | hypothetical protein Tfu_2155 2526231 - 2525677 - | hypothetical protein TERM 1598 2526196 - 2526141 - G 79 -19.1 -2.62184 | gap 3 GCTTCGCCCACAGCA GGCCGCCGGTGATGGCCGCGGCGCTCAC CAC GGCAGCGCCGC--CCACCACCG-CGGCC CCGCGCACCACTGTG leuS 2528807 - 2526315 - | leucyl-tRNA synthetase Tfu_2157 2529597 - 2530016 + | hypothetical protein Tfu_2158 2530114 - 2531661 + | putative long-chain-fatty-acid-CoA ligase Tfu_2159 2532316 - 2531870 - | hypothetical protein Tfu_2160 2533640 - 2532369 - | putative cyclopropane fatty acid synthase Tfu_2161 2535066 - 2533654 - | hypothetical protein TERM 1599 2533798 - 2533818 + g 72 -4.7 -4.44608 | gap 1, overlap 2533801 CGAGTAGAGCGACTT GTG-CCCG CCCAAC CGGGTCAC TTCTTTTTCGATCAG Tfu_2162 2535230 - 2536000 + | glutamate racemase Tfu_2163 2537550 - 2536114 - | hypothetical protein Tfu_2164 2537711 - 2538058 + | hypothetical protein Tfu_2165 2538089 - 2539333 + | hypothetical protein TERM 1600 2539745 - 2539727 - g 73 -12.4 -3.48276 | GCTCCGGTTAGACAA CGCCCTGG CTG CCAAGGCG TTGGAAGAGGAGATC Tfu_2166 2539425 - 2540036 + | hypothetical protein Tfu_2167 2542173 - 2540053 - | helicase c2:DEAD/DEAH box helicase, N-terminal TERM 1601 2542190 - 2542144 - G 75 -16.6 -2.85351 | gap 2, opp_overlap 2542155 2542156 GTTGTCCACAGGAGA GCCAGGGCGGTCTCCCGCGGGG GTTCT CACCGCGGGC-AC-GCCCTGGC TGGTCGGTGCGCTGT Tfu_2168 2543860 - 2542322 - | pectate lyase TERM 1602 2544219 - 2544178 - R 100 -15.3 -4.90266 | gap 2, opp_overlap 2544178 TCCAGCAAGGAAAAA GACCCGCGG-G-CAGTGGA GAGAAT TCCACCGACTCCGCGGGTC TTGCTGTGGAGCTAT TERM 1603 2544178 - 2544219 + r 78 -13.8 -3.26649 | gap 2, opp_overlap 2544178 TCCAGCAAGGAAAAA GACCCGCGG-G-CAGTGGAG AGAA TTCCACCGACTCCGCGGGTC TTGCTGTGGAGCTAT TERM 1604 2544709 - 2544668 - R 89 -16.6 -3.28791 | opp_overlap 2544672, overlap 2544672 ACCGGCTCCGCACAA TGCATCACGGGCCCCACC GGTGCT GGTGAGGCCCGTGATGTG TGCCTATGGAGTGGA TERM 1605 2544672 - 2544705 + r 93 -18.9 -2.93382 | opp_overlap 2544668 2544672 GCTCCGCACAATGCA TCACGGGCCCCACCG GTGC TGGTGAGGCCCGTGA TGTGTGCCTATGGAG TERM 1606 2544705 - 2544672 - R 91 -20.4 -2.59431 | opp_overlap 2544672, overlap 2544668 GCTCCGCACAATGCA TCACGGGCCCCACC GGTGCT GGTGAGGCCCGTGA TGTGTGCCTATGGAG Tfu_2169 2545492 - 2544866 - | putative phosphoglycerate mutase Tfu_2170 2545942 - 2545538 - | Iojap-related protein nadD 2546619 - 2545981 - | nicotinic acid mononucleotide adenylyltransferase Tfu_2172 2546774 - 2547814 + | hypothetical protein TERM 1607 2549077 - 2549030 - g 71 -11.3 -3.54424 | overlap 2549059 TGGTACCGGTCGAAA CTGCTAGGGCAGATGCAAG GGGCTAAATA CTTGCGGCTGCCCGAGCAG ACCGCGGAGGTCCTC TERM 1608 2550096 - 2550116 + G 78 -16.1 -3.07043 | GTCCCATCCCGCTGC GGCTCCGGC TCA GCCGGGGCC TGTTCCACTGGTCGG Tfu_2173 2548253 - 2550241 + | cell wall biosynthesis glycosyltransferase Tfu_2174 2550987 - 2550256 - | hypothetical protein TERM 1609 2551092 - 2551040 - R 75 -14.8 -2.70932 | gap 2 TCTGCGGCGGAACGA TCCCGCTGGGCGGGGAACGGGAGCCG CCG CGGCTCC-GCTCCCCGG-CTGCGAGG TGCGGGCCGCGGCGG proA 2552375 - 2551119 - | gamma-glutamyl phosphate reductase TERM 1610 2554862 - 2554837 - g 71 -11.8 -3.62046 | GGAGGCGGCGAAGAA CCCGGCGAGG ACGTGA CCCCGCCGAG CGCGCCCGGCTCCCC Tfu_2176 2552833 - 2555475 + | endoglucanase TERM 1611 2555519 - 2555478 - T 100 -23.7 -3.01712 | gap 1 CGCCCTCGCCTAACA CGGCAACCGCGGCCGTCCGC CCC GCGGGCGGCCGCGGC-ACCG TGCCGCTACCGGTCC Tfu_2177 2556682 - 2555525 - | putative glycosyl transferase Tfu_2178 2559537 - 2556679 - | CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase TERM 1612 2557186 - 2557155 - G 78 -15.8 -3.04144 | gap 1 CCGCGAGGTCGAACA GCGGCCGC-ACCGCG GTC CGCCGCCGCGGCCGC CCGCGGAACGTGGGC TERM 1613 2559695 - 2559742 + r 89 -16.3 -3.29511 | gap 1 GGGTGGTTGCACGTG TCGCGCAGC-GCAGGAGCGCCG ACGCG CGGCGCTCCTGCAGCTCACCGA TTATGGGGCGGTCAG Tfu_2179 2560920 - 2559754 - | gamma-glutamyl kinase obgE 2562313 - 2560949 - | GTPase ObgE TERM 1614 2562351 - 2562385 + r 100 -30.2 -3.73402 | opp_overlap 2562351 TGGTGGTCGAACGCA CGTGAGGCGGGCCAGT GTC ACTGGCCCGCCTCACG TTTACTACACCGTCT TERM 1615 2562385 - 2562351 - R 100 -30.2 -2.52464 | opp_overlap 2562351 TGGTGGTCGAACGCA CGTGAGGCGGGCCAGT GTC ACTGGCCCGCCTCACG TTTACTACACCGTCT rpmA 2562675 - 2562409 - | 50S ribosomal protein L27 rplU 2563002 - 2562691 - | 50S ribosomal protein L21 Tfu_2183 2565955 - 2563229 - | ribonuclease E and G TERM 1616 2565161 - 2565190 + g 73 -9.9 -3.95787 | gap 1 GGTCGTGTCCGCGGC GGCAGCGGCAGGTG CCT CCCCCGC-GCTGCC TTTCTCGGTCTCGTC TERM 1617 2566026 - 2565977 - R 79 -10.8 -4.07568 | gap 3 GGTCTCCCGTCAAAA GTTCTC-GG-G-CACGGCCCCGCAC GAG GTGCCCGGCCGCGGCGCCTGAGAAC TATCGCTGTCAATAT TERM 1618 2566078 - 2566041 - R 71 -13.5 -3.02144 | gap 1, opp_overlap 2566042 CTATCGCTGTCAATA TCCACACCGGCGTCGCCA TCA CGGCGACGCCGGT-CAAA GTCCTTGAACTGCGC Tfu_2184 2566940 - 2566074 - | hypothetical protein TERM 1619 2566411 - 2566436 + g 95 -13.3 -4.258 | gap 1, opp_overlap 2566407 2566404 AGCAGGAACACGGCC GGGCGTACGTCG AAC CGGCG-ACGCCC TTTCTTGGTGAGTCG TERM 1620 2567160 - 2567178 + r 71 -3.7 -4.56597 | overlap 2567161 2567162 2567175 TGCCGGCTGCGGCGG TGCCGCG GGCCA CGCGGAG TTTTTCGGAAAACCC TERM 1621 2567240 - 2567274 + r 100 -20.8 -3.72576 | opp_overlap 2567237, overlap 2567249 TACGTCCAATTAGGT GTACGGCCCGGCGC GAGCGGG GTGCCGGGCCGTAC TTTCGTCGACCCGGC TERM 1622 2567249 - 2567304 + r 93 -18.3 -3.30441 | opp_overlap 2567237, overlap 2567240 TTAGGTGTACGGCCC GGC-GCGAGCGGGGTGCCGGGCCGTAC TTTC GT-CGACCCGGCACTCCCCTCGCCGAC TTCTCCCACCTCATA Tfu_2185 2569249 - 2567315 - | Elongator protein 3/MiaB/NifB Tfu_2186 2570695 - 2569472 - | Sfr protein Tfu_2187 2571057 - 2570692 - | hypothetical protein TERM 1623 2571418 - 2571379 - R 100 -25.8 -4.56775 | overlap 2571348 2571380 2571382 ACCGTGGTGGAAAAA GCACCGCGGCCAGGCGGA ATGC TCCGCCTGGCCGCGGTAG GTCTGCGTCGTGCCG TERM 1624 2571417 - 2571380 - R 100 -29.3 -3.33744 | overlap 2571348 2571379 2571382 CCGTGGTGGAAAAAG CACCGCGGCCAGGCGGA ATGC TCCGCCTGGCCGCGGTA GGTCTGCGTCGTGCC TERM 1625 2571415 - 2571382 - R 100 -29.7 -3.23708 | overlap 2571348 2571380 2571379 GTGGTGGAAAAAGCA CCGCGGCCAGGCGGA ATGC TCCGCCTGGCCGCGG TAGGTCTGCGTCGTG Tfu_2188 2571870 - 2571463 - | nucleoside diphosphate kinase TERM 1626 2571862 - 2571875 + g 71 -2.3 -4.5442 | GATCAGGACAAGGGT GCGCT CCAC GGTGC TTTTCTCCTTGAGAC Tfu_2189 2572364 - 2572026 - | hypothetical protein Tfu_2190 2573701 - 2572370 - | folylpolyglutamate synthetase Tfu_2191 2573903 - 2574490 + | hypothetical protein clpX 2575869 - 2574526 - | ATP-dependent protease ATP-binding subunit TERM 1627 2576101 - 2576114 + r 75 -4.5 -4.63218 | overlap 2576071 2576068 AGGCGATCGACGCGC CACGG ATTC CTGTG TTTTCTTACCGGAAG Tfu_2193 2577016 - 2576348 - | ATP-dependent Clp protease proteolytic subunit Tfu_2194 2577681 - 2577070 - | ClpP1 peptidase. Serine peptidase. MEROPS family S14 TERM 1628 2577868 - 2577830 - R 100 -21.1 -3.53012 | gap 2, overlap 2577833 TCGCGCCTGGCGAAA CGACGCGGGCCCCGCGCCG TCG CGACGCGGGGCCCG-GT-G ACATCGGCAAGCAGC TERM 1629 2577866 - 2577833 - R 100 -23.9 -2.90496 | gap 1, overlap 2577830 CGCCTGGCGAAACGA CGCGGGCCCCGCGCCG TCG CGACGCGGGGCCCG-G TGACATCGGCAAGCA tig 2579278 - 2577887 - | trigger factor TERM 1630 2579766 - 2579809 + H 100 -19 -4.93296 | gap 1, overlap 2579768 CGTCACCCGCTCTGC TGTGAAGGCCAGGCGAGCGTG ATG CACGCA-GCCTGGCCTTCAGA TTTTTCTCGTCCTGA TERM 1631 2579768 - 2579807 + H 100 -21.6 -2.7243 | gap 1, overlap 2579766 TCACCCGCTCTGCTG TGAAGGCCAGGCGAGCGTG ATG CACGCA-GCCTGGCCTTCA GATTTTTCTCGTCCT TERM 1632 2580593 - 2580579 - g 82 -8.5 -4.51812 | opp_overlap 2580583 GCCGAGAACAAGAAA CGCGG TGCGG CCGCG TTAGGCGCACTCGCT Tfu_2196 2580174 - 2580677 + | cytidyltransferase-related TERM 1633 2580686 - 2580696 + F 72 -8.2 -4.08216 | overlap 2580684 CCTGTAGTGCGCGGG CGGC GTC GCCG TTTTCCGGAGGCTGC Tfu_2197 2580770 - 2582653 + | ABC-type multidrug transport system ATPase and permease components Tfu_2198 2582914 - 2582702 - | hypothetical protein Tfu_2199 2584430 - 2583033 - | divalent cation transporter Tfu_2200 2585765 - 2584659 - | protein phosphatase 2C-like TERM 1634 2585737 - 2585708 - G 82 -11.4 -4.20696 | overlap 2585700 2585709 GGAGGAACGCGAAAA CGCGCTGCGCCA CAGAGT TGGCGGAGCGCA GAAGGCGAGAGGGCG TERM 1635 2586691 - 2586671 - g 71 -9.6 -3.73775 | opp_overlap 2586678 2586680 CTCAGGTCCACGAAA CGGCCCGC TTGGC GCGGGTCG GCGAGTTCCGTCGCA Tfu_2201 2586115 - 2587380 + | hypothetical protein Tfu_2202 2588265 - 2587765 - | ribose-5-phosphate isomerase B TERM 1636 2588271 - 2588312 + r 100 -23.9 -2.79183 | gap 1, overlap 2588274 GGGCACGCATGCCCC CGGGAGCACTGTCCGGCGTT GAG GACGCCGGACAGTGC-CCTG TGTCCTACGGGTCGC TERM 1637 2588274 - 2588310 + r 100 -23.1 -2.94416 | overlap 2588271 CACGCATGCCCCCGG GAGCACTGTCCGGCGTT GAG GACGCCGGACAGTGCCC TGTGTCCTACGGGTC Tfu_2203 2589359 - 2588745 - | hypothetical protein Tfu_2204 2589575 - 2592115 + | aminopeptidase N TERM 1638 2592124 - 2592173 + T 93 -18.6 -3.53012 | gap 1, overlap 2592125 ACACTGACCGTTTCT GGC-CTGGTGGGCGGGCGCTGCG CGGGA CGCGGTGTCCGCCCATCGGCGTC TTTGCCCCGGCAAGG TERM 1639 2592125 - 2592170 + T 100 -21.2 -2.60496 | gap 1, overlap 2592124 CACTGACCGTTTCTG GCCTGGTGGGCGGGCGCTGCG CGGGA CGCGGTGTCCGCCCATC-GGC GTCTTTGCCCCGGCA Tfu_2205 2594311 - 2592203 - | glycoside hydrolase family protein TERM 1640 2593330 - 2593350 + g 76 -13.9 -3.53091 | opp_overlap 2593325, overlap 2593343 AGCGGTAGAAGTCCA CGCGACGCC AGC GGCGCCGCG TTTCGACGCGGACCT TERM 1641 2595323 - 2595353 + G 77 -14.6 -3.17212 | CGGGCTTTCGCCGCC GCGGCGGGAACCGC GAT GCTGATCCCGCTGC TTCCTCCCGTGCTGG Tfu_2206 2594462 - 2595715 + | putative transporter Tfu_2207 2597153 - 2595723 - | amidase TERM 1642 2596928 - 2596980 + g 71 -11.8 -3.56092 | gap 1 TCGGCACGCACAGGC CGAGGAGCGCGGGCAGGTGCGCCGG GTCC TCGGTGCGCA-GCCGCCGCTCCGCG TTTCGGGCCTGCTGG TERM 1643 2597918 - 2597896 - g 81 -7.6 -4.56597 | overlap 2597899 2597913 CCGCTTCTCCAAAAA CGAGCGCATC GAC GAAGCGCTGG CTGAGGCCCGCAACG Tfu_2208 2597348 - 2598160 + | hypothetical protein Tfu_2209 2598386 - 2600263 + | dihydroxyacid dehydratase Tfu_2210 2600892 - 2600647 - | hypothetical protein Tfu_2211 2601543 - 2600989 - | HNH nuclease TERM 1644 2602758 - 2602746 - g 76 -7.7 -4.37658 | AAGGGCGGGACAAAA CCGAA TAC TTCGG GGTGGCGGTCAGCCG Tfu_2212 2602061 - 2604169 + | prolyl oligopeptidase Tfu_2213 2604268 - 2604702 + | hypothetical protein TERM 1645 2604723 - 2604762 + G 70 -14.9 -2.74523 | gap 1, overlap 2604707 2604722 2604720 2604756 GGGCTCCAGCGGGCG GCC-GCGCGGGCCCGGTC TTTAC GGCCGGGACGGCGCTGGC TGGTCTTGGGGCTGG Tfu_2214 2604699 - 2605940 + | putative transporter Tfu_2215 2606552 - 2605986 - | hypothetical protein Tfu_2216 2608229 - 2606586 - | putative ABC transporter ATP-binding protein Tfu_2217 2609446 - 2608346 - | hypothetical protein TERM 1646 2609104 - 2609143 + g 83 -15.1 -3.61715 | opp_overlap 2609126 CGGCCCCGTGGGAGG CCAGCCGGTC-CCGGACCG CAAA CAGTCCGGCGACCG-CTGG TTCTTCCGGGCCGTA Tfu_2218 2610833 - 2609487 - | GGDEF TERM 1647 2611132 - 2611099 - R 100 -23.2 -4.30576 | GCCGCAGTACGAAAA CGCCCGTACCGCGG TCGGAT CCGCGGCACGGGCG ACAAGAGCCTCAACC Tfu_2219 2613179 - 2611158 - | GTPase TERM 1648 2612626 - 2612660 + g 74 -15 -3.06796 | gap 1 GCGGACAGCCGCAGC CGCGCCC-CCGCCTG GGTGAG CAGGCGGCGGGCACG TTCAATCAACTGCGG TERM 1649 2613040 - 2613019 - G 73 -8 -4.1891 | gap 1 CCCCGGGAAGAGAAA CCG-CCGTC GACTG GACGGGCGG CCGGGGTGAGCGGCA Tfu_2220 2615080 - 2613221 - | putative ABC transporter Tfu_2221 2616422 - 2615142 - | uroporphyrinogen-III C-methyltransferase TERM 1650 2615284 - 2615249 - G 74 -13.9 -3.29144 | opp_overlap 2615248 2615249 2615260 CTACTTCTCCGATAA CGAGCACCGCCGGAG GGTGCA CTCCGGCGGCGTGCG CTTCCTTTTCGACCG TERM 1651 2615260 - 2615289 + g 73 -7.1 -4.12942 | gap 1, opp_overlap 2615249, overlap 2615249 2615248 ATAACGAGCACCGCC GGAGGGTGCACTCC GGC GGCGTGCG-CTTCC TTTTCGACCGTTTCC Tfu_2222 2619253 - 2616809 - | cob(II)yrinic acid a,c-diamide reductase TERM 1652 2618297 - 2618264 - G 79 -14.5 -3.30124 | gap 1, opp_overlap 2618280 TTTGAGGCCGGAGAA CGCACGGGCCCGTGCC CCG GGCA-GTGCCCGGGCG TAAGCCTCCCGTTGG TERM 1653 2618787 - 2618822 + g 72 -13.9 -3.14051 | overlap 2618786 GGCGGGGCTGCGGGC TCCGCGGCACCCCGC TGGACT GCGGGCTGCGGCGGG TGTTCGTCGGCGTCC Tfu_2223 2620335 - 2619325 - | hypothetical protein cobD 2621232 - 2622200 + | cobalamin biosynthesis protein Tfu_2225 2622735 - 2622256 - | hypothetical protein TERM 1654 2622818 - 2622787 - H 70 -2.3 -4.64766 | gap 1 GGGAGATCGGAAAAA GAAAAC-CTGACGA GAAGA TCGCCCGTGTTCTC TGATGTCACGATTGG Tfu_2226 2622915 - 2623355 + | putative integral membrane protein Tfu_2227 2623447 - 2624526 + | SPFH domain-containing protein/band 7 family protein Tfu_2228 2625879 - 2624911 - | putative quinone oxidoreductase Tfu_2229 2627871 - 2625937 - | tyrosine protein kinase:Serine/threonine protein kinase TERM 1655 2626912 - 2626951 + g 74 -14.8 -3.05384 | CTGGGTGGGAGGGGC CGCTGCTGCCGCGCCCAC CTGG GCGGGCACGGCAGCCGGG TTCGGTCCGGAGGGG Tfu_2230 2628159 - 2628422 + | hypothetical protein TERM 1656 2628489 - 2628435 - T 70 -14.3 -2.64803 | gap 3, overlap 2628431 2628432 TGAGCTGGAAACGCA GCCACGGCGGAGCGGGCGCGCGCCCA GGCGGG TGGG-GC-CGCGCGC-CCGCCGCGTC CCGGGCACGGCGGGA Tfu_2231 2628744 - 2628553 - | hypothetical protein TERM 1657 2629267 - 2629288 + G 72 -3.6 -4.62069 | gap 1, overlap 2629245 GTCGCCGTGCACCGG CCG-CCGCG CACTT CGCTGACGG TTTTTGCGCTCAGCC Tfu_2232 2628961 - 2630088 + | putative two-component sensor kinase Tfu_2233 2630085 - 2630771 + | LuxR response regulator receiver Tfu_2234 2632363 - 2630777 - | spermidine synthase Tfu_2235 2632785 - 2632363 - | hypothetical protein Tfu_2236 2633236 - 2632826 - | hypothetical protein TERM 1658 2633182 - 2633194 + g 72 -4.8 -4.44667 | GCGCCAGCAGGCCCA GTCC GATGA GGAC TTTCTTCTTGGCGGG Tfu_2237 2633771 - 2633226 - | hypothetical protein Tfu_2238 2634383 - 2633784 - | hypothetical protein Tfu_2239 2634704 - 2636683 + | hypothetical protein Tfu_2240 2637182 - 2636694 - | AsnC family transcriptional regulator Tfu_2241 2637373 - 2637741 + | hypothetical protein TERM 1659 2637946 - 2637969 + T 72 -3.6 -4.63486 | overlap 2637947 TCCTGTTCCCCGTCA CCGGTCCGGG AGTT CCCGGTCAGA TTTTCTTCACCACAT Tfu_2242 2638762 - 2637965 - | purine nucleoside phosphorylase Tfu_2243 2638914 - 2639597 + | hypothetical protein TERM 1660 2639581 - 2639609 + T 79 -2.5 -5.01732 | gap 3, overlap 2639586 2639587 2639604 CGCGCATGTCGCGCA GCAGTCGGCGAGGT TGAC ACC-CGCC--CTGC TTTTTTGCCGGGGTT TERM 1661 2639872 - 2639913 + T 91 -16.6 -3.53563 | overlap 2639872 2639902 TGGCGCTGGCCCATG CCC-GCCCCGGTCTCAAGCG TCAC CGCA-GAGGCCGGGGCCGGG TTTGGCCGCGCCTCT TERM 1662 2639872 - 2639912 + T 81 -16.8 -2.71924 | gap 1, overlap 2639872 2639902 TGGCGCTGGCCCATG CCCGCCCCGGTCTCAAGCG TCAC CGCA-GAGGCCGGGGCCGG GTTTGGCCGCGCCTC Tfu_2244 2641394 - 2640042 - | hypothetical protein TERM 1663 2641383 - 2641364 - G 73 -7.1 -4.24342 | TTCCCGATGAAGAAA GACCGGA TTCGTC CCCGGTC CCGTGCCGCATCCCC Tfu_2245 2643383 - 2641419 - | acetoacetyl-CoA synthetase TERM 1664 2644497 - 2644515 + G 71 -2.2 -4.56597 | overlap 2644498 2644499 GACGCCCGGATCCTT GTCGTGGG CTA CCCCCGGA TTTTTCCGGAGGAAC Tfu_2246 2643591 - 2644931 + | hypothetical protein Tfu_2247 2646194 - 2644938 - | aminotransferase TERM 1665 2646422 - 2646406 - H 70 -13.7 -2.63596 | overlap 2646408 CTGCAGCGGAGAGGA CACCGGG GTT CCCGGTG GGATGGGGGGCGCGG TERM 1666 2646600 - 2646583 - H 71 -10.5 -3.58905 | AGGTTTGAGAGATAA CGCGCAG GCTC CCGCGCG CAGAAACGCCCCGTG Tfu_2248 2646868 - 2648520 + | acyl-CoA synthetase Tfu_2249 2648713 - 2649672 + | hypothetical protein TERM 1667 2649694 - 2649736 + F 77 -11.3 -3.77177 | CGCCTGTCCTCTCTA CCCCCGCTGTCCCCT TCCGCCAGAGATC AGGGAGCAGCGGGGG TTTGCGTGTATTGCT Tfu_2250 2649845 - 2650651 + | phosphomethylpyrimidine kinase TERM 1668 2650864 - 2650822 - T 100 -15.7 -4.40804 | overlap 2650826 GACTAGGCGAGAAAA GAACTGTCCGGATGCGG GTGCAGGCT CCGCATCCGGACATCTC ACTGACGCGGCAGTC TERM 1669 2650860 - 2650826 - T 91 -17.3 -3.18517 | overlap 2650822 AGGCGAGAAAAGAAC TGTCCGGATGCGG GTGCAGGCT CCGCATCCGGACA TCTCACTGACGCGGC TERM 1670 2650924 - 2650964 + T 100 -21.9 -4.52857 | overlap 2650925 CACCACCGCAGACTG TCGCGGCCGTGGGATAACG GAG CTGTATCCCACGGCCGCGG TTTTCTGTGACGGGT TERM 1671 2650925 - 2650963 + T 100 -23.2 -3.31232 | overlap 2650924 ACCACCGCAGACTGT CGCGGCCGTGGGATAACG GAG CTGTATCCCACGGCCGCG GTTTTCTGTGACGGG Tfu_2251 2652461 - 2650989 - | sodium:alanine symporter Tfu_2252 2652899 - 2652654 - | putative molybdopterin-guanine dinucleotide biosynthesis protein TERM 1672 2653115 - 2653105 - R 84 -8.2 -4.51378 | overlap 2653106 2653107 ACCGACAGCAGAAAA GCCG CGA CGGC CCGCTGGTCCGGCGG Tfu_2253 2654684 - 2653392 - | aminotransferase Tfu_2254 2654823 - 2655767 + | LysR family transcriptional regulator Tfu_2255 2655803 - 2657281 + | hypothetical protein Tfu_2256 2657558 - 2658469 + | hypothetical protein Tfu_2257 2658466 - 2659746 + | glucosyltransferase Tfu_2259 2661098 - 2660118 - | phosphoglycerate dehydrogenase and related dehydrogenase Tfu_2258 2659807 - 2660211 + | hypothetical protein TERM 1673 2661860 - 2661845 - g 72 -3.2 -4.57073 | overlap 2661846 2661848 GAGCTCCCGCAAAAA CGAGGA GCGG TCCTCC AGCGTCACGTGGGTC Tfu_2260 2661618 - 2662694 + | hypothetical protein TERM 1674 2662709 - 2662748 + T 71 -10.7 -3.65991 | overlap 2662712 2662712 AACCTTGCGGGACCG TATCGCTGCGGGCAGGT CAGTGC GCCTGTCCGCAGCCGTG TTGTGTTCAGGCCGT TERM 1675 2662712 - 2662746 + T 73 -12.2 -3.41024 | gap 1, overlap 2662709 2662712 CTTGCGGGACCGTAT C-GCTGCGGGCAGGT CAGTGC GCCTGTCCGCAGCCG TGTTGTGTTCAGGCC Tfu_2261 2663774 - 2662755 - | hypothetical protein TERM 1676 2663673 - 2663719 + g 77 -15 -3.23492 | overlap 2663687 CGCCTTGCTGTTCCC GCGGGGCACGGCGGGAGCGC GGTGCGG GTGGTCCTCCCGGGCCCCGC TCTTCGTGTCTGCTG TERM 1677 2663687 - 2663721 + g 74 -13.4 -3.3382 | overlap 2663673 CGCGGGGCACGGCGG GAGCGCGGTGCGGGTG GTC CTCCCGGGCCCCGCTC TTCGTGTCTGCTGCC TERM 1678 2664243 - 2664285 + r 100 -18.4 -4.45738 | opp_overlap 2664250, overlap 2664244 TTGCCTTCGGCAGGA GGACGAAGGGGACCATGCCG GCG CGGCGTGGTCCCCTTCCCCG TTTCTTGTTCGCGTC TERM 1679 2664244 - 2664284 + r 100 -21.9 -3.2672 | opp_overlap 2664250, overlap 2664243 TGCCTTCGGCAGGAG GACGAAGGGGACCATGCCG GCG CGGCGTGGTCCCCTTCCCC GTTTCTTGTTCGCGT TERM 1680 2664278 - 2664250 - R 100 -20.3 -3.23216 | opp_overlap 2664244 2664243 CGGCAGGAGGACGAA GGGGACCATGCCG GCG CGGCGTGGTCCCC TTCCCCGTTTCTTGT Tfu_2262 2665475 - 2664309 - | cell wall-associated hydrolase (invasion-associated proteins) Tfu_2263 2666549 - 2665638 - | putative dehydrogenase Tfu_2264 2667556 - 2666750 - | putative rRNA methylase Tfu_2265 2668116 - 2667613 - | putative secreted protein Tfu_2266 2668758 - 2670548 + | von Willebrand factor, type A Tfu_2267 2670712 - 2671323 + | hypothetical protein Tfu_2268 2671388 - 2673049 + | hypothetical protein TERM 1681 2673458 - 2673440 - g 86 -10.2 -4.62069 | opp_overlap 2673440, overlap 2673442 CCCCGAGCCGAAAAA GGTCCCGC TGT GCGGGAAC TCCATTGCGACCGAC Tfu_2269 2673147 - 2673788 + | oligoribonuclease TERM 1682 2673934 - 2673992 + F 100 -22.7 -3.86351 | gap 1, opp_overlap 2673949, overlap 2673935 2673935 AATCCCGTCACTCAC CCTGATCACGCACAAGGCCCGGACTTTC CGCG GAAAGTCCGGGCCTTGTGCGT-ATCCCC CTTTTTTTCCGCTGT TERM 1683 2673935 - 2673991 + F 100 -26.2 -2.90726 | gap 1, opp_overlap 2673949, overlap 2673934 2673935 ATCCCGTCACTCACC CTGATCACGCACAAGGCCCGGACTTTC CGCG GAAAGTCCGGGCCTTGTGCGT-ATCCC CCTTTTTTTCCGCTG TERM 1684 2673935 - 2673993 + F 100 -14.2 -5.45726 | gap 3, opp_overlap 2673949, overlap 2673934 2673935 ATCCCGTCACTCACC --CTGATCACGCACAAGGCCCGGACTTTC CGCG GAAAGTCCGGGCCTTGTGCGT-ATCCCCC TTTTTTTCCGCTGTC TERM 1685 2673978 - 2673949 - f 100 -22.3 -3.37796 | opp_overlap 2673935 2673934 2673935 CCTGATCACGCACAA GGCCCGGACTTTC CGCG GAAAGTCCGGGCC TTGTGCGTATCCCCC Tfu_2270 2674596 - 2675681 + | hypothetical protein Tfu_2271 2675746 - 2676522 + | hypothetical protein Tfu_2272 2676567 - 2678180 + | putative septum site-determining protein Tfu_2273 2678186 - 2678560 + | hypothetical protein Tfu_2274 2678597 - 2679937 + | putative secretory protein Tfu_2275 2679934 - 2680866 + | putative integral membrane protein Tfu_2276 2680989 - 2681810 + | putative integral membrane protein TERM 1686 2682392 - 2682363 - g 72 -14.2 -3.13403 | overlap 2682314 2682361 GGCCGCGGAGCAAGA GCGGCGTCGCGC AGCTGA ACGCGCCGCCGC AGCAGCAGAAGAGCG TERM 1687 2682560 - 2682544 - g 71 -11.5 -3.54424 | overlap 2682554 GCCCAGGTGGTGAAA GCCGCAG AGA CCGCGGC GCGCGAAGCCCGGCA Tfu_2277 2681815 - 2683026 + | ATP-binding region, ATPase-like TERM 1688 2683644 - 2683614 - g 77 -3.8 -4.67168 | overlap 2683606 2683623 AAAAACCGTGAAAAA CCACATCAACCGAA TTT TTCGGAAGTTGGGG GTGCGTACCCGAGCA Tfu_2278 2683051 - 2683704 + | LuxR response regulator receiver Tfu_2279 2683834 - 2684097 + | hypothetical protein TERM 1689 2684134 - 2684186 + G 100 -28.8 -3.68962 | gap 1, opp_overlap 2684151 TCACTCTCAAGTCTC CATCG-GCCGATGAGCAAGGGCAGG CGAG CCTGCTCTTGCTCATCGGCATGATG TTGTCTCTGTTAGCG TERM 1690 2684790 - 2684834 + G 80 -16.8 -3.22476 | gap 1, opp_overlap 2684796 2684802, overlap 2684802 GCCGACTCGGATGAT GAGG-AAGATGAAGATCCTCA GCCT TAAGGATCTTCATCTTGCCTC TTCATCCTCGATAGT Tfu_2280 2684112 - 2684816 + | hypothetical protein TERM 1691 2684827 - 2684796 - f 86 -15.4 -3.23216 | opp_overlap 2684790 2684802, overlap 2684802 TCGGATGATGAGGAA GATGAAGATCCTCA GCCT TAAGGATCTTCATC TTGCCTCTTCATCCT TERM 1692 2685379 - 2685360 - g 86 -12.2 -4.23999 | overlap 2685357 CGATATGCAAAACAA TAAGCGGC ACAT GCCGCTTA AGCTGACTGATGGGA TERM 1693 2685815 - 2685800 - g 75 -5.4 -4.63527 | CCACCACCGTAAAAA TCGATG GTCA CACCGA TAACACGGGAAACGA Tfu_2281 2684947 - 2686017 + | Outer membrane protein and related peptidoglycan-associated (lipo)proteins Tfu_2282 2686095 - 2686586 + | hypothetical protein Tfu_2283 2686622 - 2687290 + | cell wall-associated hydrolase (invasion-associated proteins) Tfu_2284 2687388 - 2688164 + | hypothetical protein Tfu_2285 2689159 - 2688230 - | FKBP-type peptidyl-prolyl cis-trans isomerase 1 TERM 1694 2688528 - 2688546 + g 79 -7.5 -4.44461 | opp_overlap 2688542 TGGACCGGATCACCT TCACCTT CGATC AAGGTGA TTTTCTCCAGTTGTT Tfu_2286 2689659 - 2689156 - | hypothetical protein Tfu_2287 2690900 - 2689659 - | hypothetical protein TERM 1695 2690715 - 2690691 - G 90 -7.8 -5.08824 | overlap 2690694 TCCCCACGCAAAAAA GAGCACGGTG GCAAT CACCGCGATC AGCGCCACGACCCCG TERM 1696 2691049 - 2691092 + H 82 -6 -4.72272 | gap 2, overlap 2691051 2691054 TAACTAAGGTTCGCG GCCGTGAGCCGCGGTGGCAG AAAGCG CTGC-ACCGTGCCTC-CTGC TTTTTCATCCCGACC Tfu_2288 2691052 - 2692092 + | hypothetical protein Tfu_2289 2692185 - 2693528 + | hypothetical protein Tfu_2290 2693544 - 2693945 + | hypothetical protein Tfu_2291 2696062 - 2693942 - | oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal Tfu_2292 2696998 - 2696108 - | putative peptide ABC transporter permease protein Tfu_2293 2698133 - 2697051 - | oxidoreductase Tfu_2294 2700477 - 2698408 - | phosphatase Tfu_2295 2700916 - 2701518 + | hypothetical protein Tfu_2296 2704930 - 2701736 - | putative integral membrane efflux protein TERM 1697 2703084 - 2703112 + g 73 -9.6 -3.91032 | gap 1 CCCCCGCCGCCGAAG GTCGCCTGG-TAG GACT CGATCCAGGCGAC TTTCTCCAATGCTTC Tfu_2297 2705162 - 2705644 + | regulatory protein, MarR TERM 1698 2706291 - 2706313 + G 93 -6.1 -5.24129 | overlap 2706274 2706278 2706296 GGCGGCTCGTCCAAC CCGACGCGG GGCGG CCGCACCGG TTTTTTGTGCGCCGC Tfu_2298 2705651 - 2706457 + | hypothetical protein Tfu_2299 2706801 - 2706454 - | ArsR family transcriptional regulator TERM 1699 2707255 - 2707266 + G 72 -5.8 -4.37886 | overlap 2707253 AACCGGTGAGCGCCT CCAC GATG GTGG TTTTCTCGACCGTCG Tfu_2300 2706903 - 2707805 + | cation efflux protein TERM 1700 2708965 - 2708994 + G 72 -3.4 -4.56597 | overlap 2708955 CCGGGCTGGTGCTTC CGGTGTTCGCGG TGATGT CCGCAGGCGTCG TTTTTGCGGGCGGGC Tfu_2301 2708118 - 2709362 + | Na+/H+ antiporter NhaA TERM 1701 2710186 - 2710204 + G 73 -8 -4.11216 | GCCACAGTGCTCGGC GGCCTGGG GTT CCCGGTCC TTTTGGAGCTGCGCA Tfu_2302 2709505 - 2710914 + | putative cation transporter Tfu_2303 2710932 - 2711600 + | putative cation transporter Tfu_2304 2711687 - 2712622 + | putative ABC-transporter metal-binding lipoprotein Tfu_2305 2712921 - 2713154 + | putative regulator TERM 1702 2713168 - 2713191 + T 100 -17.4 -4.46656 | opp_overlap 2713159 AGACGACGGGCATCG GCCCCGGCGT GAAA GCGCCGGGGC TTTTGCTGTTCTGCG Tfu_2306 2714241 - 2713363 - | helix-hairpin-helix DNA-binding motif-containing protein TERM 1703 2714393 - 2714383 - R 77 -4.6 -4.64598 | overlap 2714384 CAATCACCTGAAAAA GCCC CAC GGAC CGGAAGGCTGCGGTT Tfu_2307 2714975 - 2714430 - | putative regulator TERM 1704 2715130 - 2715116 - H 100 -2.7 -5.49234 | opp_overlap 2715119 AGAGCGAACAAAAAA GGCTG CGATT CTGCC GCACTTTCCAGGACA Tfu_2308 2715395 - 2716153 + | putative 3-oxoacyl-ACP reductase Tfu_2309 2716270 - 2717505 + | putative acyl-CoA dehydrogenase Tfu_2310 2717502 - 2718635 + | putative acyl-CoA dehydrogenase TERM 1705 2718641 - 2718672 + T 95 -12.3 -4.25104 | CGCCCCGTGACGGGG GTGCCGGGGCC TGAGGGGGGC GGTCCCGGCAC TTTTCCTCGGCCGGG Tfu_2311 2719638 - 2718688 - | putative secreted protein Tfu_2312 2720367 - 2719771 - | putative cobalt transport system permease protein Tfu_2313 2721047 - 2720364 - | ABC-type cobalt transport system ATPase component Tfu_2314 2721712 - 2721044 - | hypothetical protein TERM 1706 2721379 - 2721359 - G 72 -13.3 -3.21747 | overlap 2721343 2721341 CCAGCTGATGAGGAA TCCGCCGGA CGG TCCGGCGAA GGAGGCCAGTCCTCC Tfu_2315 2722930 - 2721869 - | putative secreted protein Tfu_2316 2723776 - 2723048 - | thioesterase II Tfu_2317 2727834 - 2723860 - | ATP-dependent helicase HrpA TERM 1707 2727568 - 2727582 + g 100 -7.8 -5.28176 | GTGGTCGCGGATCGC GGCGAG AAT CTCGTC TTTTTTCTGACTGAC TERM 1708 2727686 - 2727722 + g 81 -2.8 -5.00884 | gap 1, overlap 2727698 2727699 ATGTCGGCGCTGATC TCCGCGGCGACAGCGCG GCGC CG-GTCGGGGTCGCGGA TTTTTTCCGCGCCGT Tfu_2318 2727899 - 2728300 + | hypothetical protein TERM 1709 2728310 - 2728351 + T 72 -11.6 -3.53091 | gap 2, overlap 2728319 CAGTAAGCTACGGAG TGCAGGGTGGGTCCCGCCCG TTAC CGGGCGGGGCCT-TC-TGCG TTTCCGGCGGGGGGT TERM 1710 2728319 - 2728344 + T 100 -19.7 -3.47349 | overlap 2728310 ACGGAGTGCAGGGTG GGTCCCGCCCG TTAC CGGGCGGGGCC TTCTGCGTTTCCGGC Tfu_2319 2729343 - 2728330 - | hypothetical protein TERM 1711 2729665 - 2729628 - R 74 -11.1 -3.65317 | opp_overlap 2729628, overlap 2729622 ACCGACAAAGCACAA CCCCGGCGGACCACCAC TGAA GGCGTGTCCCACCGGGG TTTCCATGGTGCGCC Tfu_2320 2731230 - 2729779 - | putative membrane transport protein TERM 1712 2731552 - 2731525 - R 90 -11.2 -4.38154 | opp_overlap 2731532, overlap 2731526 2731527 2731529 ATACCGCGCAGAAAA GCCAGCACCCCG GTAC CGCGGTGCTCGC GATACCGGGGTTTCG TERM 1713 2731570 - 2731526 - R 78 -13.7 -3.2241 | gap 2, opp_overlap 2731532, overlap 2731525 2731527 2731529 TACCGCGCAGAAAAG CCA-G-CACCCCGGTACCGCG GTGCT CGCGATACCGGGGTTTCGTGG TGCGCCATCAGGGAC TERM 1714 2731567 - 2731527 - R 77 -15.4 -2.53125 | opp_overlap 2731532, overlap 2731525 2731526 2731529 ACCGCGCAGAAAAGC CAGCACCCCGGTACCGCG GTGCT CGCGATACCGGGGTTTCG TGGTGCGCCATCAGG TERM 1715 2731565 - 2731529 - R 73 -14.4 -2.80077 | opp_overlap 2731532, overlap 2731525 2731527 2731526 CGCGCAGAAAAGCCA GCACCCCGGTACCGCG GTGCT CGCGATACCGGGGTTT CGTGGTGCGCCATCA TERM 1716 2731532 - 2731562 + r 100 -19 -3.78775 | opp_overlap 2731525 2731529 2731527 2731526 GCAGAAAAGCCAGCA CCCCGGTACCGCGG TGC TCGCGATACCGGGG TTTCGTGGTGCGCCA TERM 1717 2731727 - 2731768 + r 100 -23 -2.82635 | CGGATTCGTCCCGTT CGTCGCCCGGCGTCCACC AGGGAC GGCGGACGCCGGGCGACA TGTGGTCATGACCAT Tfu_2321 2731959 - 2731774 - | hypothetical protein TERM 1718 2731996 - 2732008 + r 93 -3.3 -5.24129 | overlap 2731999 CCGGGGGTGCGCATC CCCCT CCG ACGGG TTTTTTCTCGCGGGG Tfu_2322 2733030 - 2732056 - | N-acetylglucosamine kinase Tfu_2323 2733365 - 2734312 + | putative transcriptional regulator murQ 2734410 - 2735324 + | N-acetylmuramic acid-6-phosphate etherase TERM 1719 2735347 - 2735386 + T 71 -12 -3.28712 | gap 1 CGACGGCAGTGGTGC CGGCCCAGGCGTGGCTGGA CTA TCCCGCCTCGTC-GGACCG TTCTGCGGCCAGCGC Tfu_2325 2736178 - 2735366 - | hypothetical protein Tfu_2326 2736299 - 2738434 + | putative DNA helicase Tfu_2327 2738490 - 2739362 + | hypothetical protein TERM 1720 2739539 - 2739579 + F 74 -11.1 -3.59698 | overlap 2739550 TTCGGGTGCAGTTCT CCGCACGGCGGGCCC GCTCGGGCCCG GGGTTCGCGGTGCGG TTCTGTGTCGGGTCG TERM 1721 2739691 - 2739669 - f 73 -9.8 -3.85698 | TGCGCGGGTGAGAAA TCCCCTCCCC TGT GGATAGGGGA AAGAGTCAATATGCT Tfu_2328 2739702 - 2740883 + | hypothetical protein TERM 1722 2741003 - 2741048 + F 72 -11.7 -3.46602 | TCTGCTGCGGGAGAC GGACGGCCGCCCACACCGGGT GGGC ACCGGGTGTGAGCAGCGCTCC TTGTGGTGTGGGACG TERM 1723 2741140 - 2741166 + F 77 -12.4 -3.61178 | opp_overlap 2741130, overlap 2741107 2741130 GCACACCTCGGACTC CGCGGTTATGGA CAG TCCATAACTGTG TTTGAGGTCACTAGA Tfu_2329 2741187 - 2743226 + | superfamily protein I DNA/RNA helicase Tfu_2330 2744678 - 2743323 - | hypothetical protein Tfu_2331 2745297 - 2744683 - | putative cholesterol esterase TERM 1724 2747211 - 2747175 - g 71 -11.4 -3.61715 | GATGTGGCCCAACAA GGGGGAGCCTGACCCG CGGCC CGCTCCGGGCTCCCCC TACCAGCGGGTGGAG Tfu_2332 2745520 - 2747388 + | putative cholesterol oxidase Tfu_2333 2748118 - 2747357 - | MerR family transcriptional regulator Tfu_2334 2748358 - 2749269 + | hypothetical protein Tfu_2335 2749266 - 2749589 + | monooxygenase Tfu_2336 2751146 - 2749800 - | hypothetical protein TERM 1725 2751163 - 2751202 + H 77 -12.9 -3.34902 | overlap 2751158 2751160 2751166 TCACCATTTTCTCGT GCACCACCGCTGGATCA CGCGTC TGATCCGGCGGTGCTCC TGTTCTCTGCTGCGC TERM 1726 2751279 - 2751327 + H 83 -17.3 -2.62184 | GTCCGCTTCCGCGGT CCGGTGGTGGCGGGGTGCGATGG CCG CTACCGCGGTCCGCGGCCACCGG TGCTGTCAGGGCAGG Tfu_2337 2751783 - 2753129 + | ABC-type glucosylglycerol transport system substrate-binding protein Tfu_2338 2753196 - 2754182 + | ABC-type glucosylglycerol transport system permease protein TERM 1727 2754341 - 2754307 - g 73 -12.7 -3.50853 | GCGGGCGAAGGAGAA CCCGGCCCACAGCCG CGAGT CGGCCGCGGCCCGCG TGCGGAAACGCCTGA Tfu_2339 2754179 - 2755228 + | ABC-type glucosylglycerol transport system permease protein TERM 1728 2755243 - 2755299 + T 87 -17.3 -2.90075 | gap 2, overlap 2755244 2755256 AGCCGTACGGACGTG AGTCCACGG-TGCGGCCCCGG-CAGGG CTCTT CCCTGGCCGGGGCCGCAGCCGTCAGCG TCTCATTCCCCGCGG Tfu_2340 2756194 - 2755331 - | hypothetical protein Tfu_2341 2756721 - 2756206 - | protein-tyrosine-phosphatase Tfu_2342 2757237 - 2756806 - | response regulator receiver Tfu_2343 2758927 - 2757266 - | multi-sensor signal transduction histidine kinase TERM 1729 2757998 - 2758033 + g 87 -17 -3.29211 | gap 1, opp_overlap 2758001, overlap 2758001 GGAGGCGACGTAAGC GAACTGCTCCAGCTCCA GGT TGGAGC-GGCGCAGTTC TTCGGTTTGGCGTTC TERM 1730 2758001 - 2758030 + g 78 -12.9 -3.77832 | gap 1, opp_overlap 2758001, overlap 2757998 GGCGACGTAAGCGAA CTGCTCCAGCTCCA GGT TGGAGC-GGCGCAG TTCTTCGGTTTGGCG Tfu_2344 2760162 - 2758933 - | response regulator receiver:protein phosphatase 2C-like TERM 1731 2759660 - 2759695 + g 81 -10.5 -4.25104 | AGGCGCATGTTCTCC CGGGCGTGCAGTT-CGG CCTC CCGTAACTGC-CGCGCG TTTTCGTCGGCGCGC TERM 1732 2760528 - 2760557 + H 72 -10.9 -3.44229 | opp_overlap 2760530, overlap 2760530 GGTAGCGATGTGGAC AATTTCATGACGA CATG TCGTCATGAAATA TTGTGCTCGTGGACT TERM 1733 2760555 - 2760530 - H 77 -13.5 -3.31461 | opp_overlap 2760528 2760530 TAGCGATGTGGACAA TTTCATGACGA CATG TCGTCATGAAA TATTGTGCTCGTGGA TERM 1734 2760530 - 2760555 + H 74 -13.5 -3.29273 | opp_overlap 2760530, overlap 2760528 TAGCGATGTGGACAA TTTCATGACGA CATG TCGTCATGAAA TATTGTGCTCGTGGA Tfu_2345 2760649 - 2761341 + | heme oxygenase (decyclizing) Tfu_2346 2761388 - 2762041 + | hypothetical protein Tfu_2347 2763146 - 2762205 - | exonuclease TERM 1735 2762283 - 2762256 - G 93 -21.3 -3.14132 | CGCCGCCGCCAGCAA CGCGGCCGCGG TCATCC CCGCGGCCGCG GCCCCGATCCGCAGC TERM 1736 2763003 - 2763031 + g 73 -15.9 -2.62983 | opp_overlap 2763002 GGCGATCTCACAGAC CCGGGCTCCCCCC TCA GGCCGGAGCCCGG TGGTCTCGACATCGA Tfu_2348 2763397 - 2764599 + | putative ferredoxin reductase Tfu_2349 2765592 - 2764633 - | prolyl aminopeptidase TERM 1737 2765161 - 2765120 - G 71 -10.9 -3.63744 | gap 1, overlap 2765118 2765122 2765123 2765125 2765143 2765151 GCGTCCGGGAAAAGA TAG-GAGGCGCCGCTCTGAT AGA ACCAGAGCAGCTCCTCGCTG CGGAGCGTGAAAATG TERM 1738 2765158 - 2765122 - G 76 -13.7 -3.39908 | overlap 2765120 2765118 2765123 2765125 2765143 2765151 GTCCGGGAAAAGATA GGAGGCGCCGCTCTGAT AGA ACCAGAGCAGCTCCTCG CTGCGGAGCGTGAAA TERM 1739 2765157 - 2765123 - G 77 -17.2 -2.63623 | overlap 2765122 2765120 2765118 2765125 2765143 2765151 TCCGGGAAAAGATAG GAGGCGCCGCTCTGAT AGA ACCAGAGCAGCTCCTC GCTGCGGAGCGTGAA Tfu_2350 2766124 - 2767185 + | phospho-2-dehydro-3-deoxyheptonate aldolase TERM 1740 2767196 - 2767243 + F 81 -16.9 -2.77899 | overlap 2767193 CCTAAGCACTGCCCA GCGCCGGTGCGCGGCCTCC TCCCCCATCT GCCCGCCGCGCACCGGCGC TCCTTGCTCGGCGAC gcvT 2767523 - 2768641 + | glycine cleavage system aminomethyltransferase T TERM 1741 2768706 - 2768725 + F 77 -15 -2.81464 | TGAAGGTGTCAGGGC GGCGCACG TCCG CGTGCGCC TCTGCTGAATAATGG Tfu_2352 2768763 - 2769143 + | glycine cleavage system H protein TERM 1742 2769305 - 2769273 - g 75 -9.7 -4.07885 | GATCGCCTCCGAAAA CTTTGCGCCCCGGGC GGT GCTGGAGGCGCAAGG CACGGTGCTGACCAA Tfu_2353 2769151 - 2770422 + | serine hydroxymethyltransferase Tfu_2354 2770909 - 2770505 - | hypothetical protein Tfu_2355 2771680 - 2771078 - | hypothetical protein TERM 1743 2771698 - 2771726 + r 70 -8 -3.9461 | gap 1, overlap 2771699 CTGTCCCCCCATTCT CCGGGCGCC-GCG TACG CGAGGGCGCCCGC TTCTTCTTCCACCCC TERM 1744 2772037 - 2772063 + r 75 -13.7 -3.01791 | opp_overlap 2772037 CAACTTACCGCAAAA CAGAGCGTGGC CTATA GCCACGCTCCG TATTCAGACCACCGT TERM 1745 2772063 - 2772037 - R 95 -16.6 -4.15453 | opp_overlap 2772037 CAACTTACCGCAAAA CAGAGCGTGGCC TAT AGCCACGCTCCG TATTCAGACCACCGT Tfu_2356 2773004 - 2772147 - | formyltetrahydrofolate deformylase Tfu_2357 2773180 - 2774385 + | hypothetical protein TERM 1746 2774434 - 2774393 - T 100 -31.7 -4.05446 | overlap 2774375 2774374 TCCTGTAAGCAGAAA CGGGTGGGGCCCGCCAGGA ACCG TTCTGGCGGGCCCCACCCG TCACCACTCAACGCT Tfu_2358 2774840 - 2774442 - | hypothetical protein Tfu_2359 2775937 - 2774858 - | hypothetical protein Tfu_2360 2776262 - 2776744 + | bacterioferritin comigratory protein TERM 1747 2777007 - 2777055 + T 100 -27.8 -2.63596 | opp_overlap 2777007, overlap 2777009 2777023 2777024 CCTACCACAGAAAAA CACTGGCCGGAGAGAAG-CGGAGA GGA TCTCCGTCTTC-CTCCGGCCAGTG TCGTCTCAGGTCCGC TERM 1748 2777055 - 2777007 - T 100 -27.8 -5.00895 | opp_overlap 2777007 2777009 2777023 2777024 CCTACCACAGAAAAA CACTGGCCGGAGAGAAG-CGGAGA GGA TCTCCGTCTTC-CTCCGGCCAGTG TCGTCTCAGGTCCGC TERM 1749 2777009 - 2777053 + T 100 -24.6 -2.85999 | opp_overlap 2777007, overlap 2777007 2777023 2777024 TACCACAGAAAAACA CTGGCCGGAGAGAAG-CGGAGA GGA TCTCCGTCTTC-CTCCGGCCAG TGTCGTCTCAGGTCC Tfu_2361 2778349 - 2777090 - | tyrosine protein kinase:Serine/threonine protein kinase Tfu_2362 2779935 - 2778553 - | putative proteinase Tfu_2363 2781340 - 2779997 - | putative zinc proteinase TERM 1750 2781623 - 2781597 - R 100 -14.5 -5.60993 | CCCCGGATAAAAAAA TTGGGCCGCCT ACATA AGGCAGCCCAA AAACAAATAGCTCCA TERM 1751 2781695 - 2781651 - R 100 -5.7 -5.69262 | gap 1, opp_overlap 2781651 CCAGAAAAAGAAAAA GGAGGGCGG-GAAAGGAGAA TCTCTG TCCTCCTACGTCCACCCTCC TTTTTGCGTGTGTGT TERM 1752 2781651 - 2781695 + r 74 -2 -4.73448 | gap 1, opp_overlap 2781651 CCAGAAAAAGAAAAA GGAGGGCGGG-AAAGGAGAAT CTCT GTCCTCCTACGTCCACCCTCC TTTTTGCGTGTGTGT TERM 1753 2783033 - 2783044 + r 74 -2.2 -4.7254 | CGTCTTACGACTTCG CACG GACC TGTG TTTTTAGTAAACAGT Tfu_2364 2788404 - 2787781 - | Ham1-like protein rph 2789120 - 2788401 - | ribonuclease PH Tfu_2366 2790041 - 2789235 - | hypothetical protein TERM 1754 2790047 - 2790065 + r 72 -8.8 -4.12902 | opp_overlap 2790036, overlap 2790038 2790061 GAGACGTCACTGTGT CACGGAGA GTT TCTCCGGG TTTTCCAGGTGGTTA Tfu_2367 2790988 - 2790173 - | hypothetical protein Tfu_2368 2792031 - 2791084 - | cysteine synthase Tfu_2369 2792315 - 2792037 - | hypothetical protein Tfu_2370 2792841 - 2792434 - | Mov34/MPN/PAD-1 Tfu_2371 2793514 - 2792966 - | hypothetical protein clpS 2793844 - 2793554 - | ATP-dependent Clp protease adaptor protein ClpS TERM 1755 2793926 - 2793904 - H 71 -10.6 -3.59979 | overlap 2793905 GTGTCGCACCTCAAA CCTCCTCCCA TTG TGGGAAGAGA CCGCAGTGTCCGGGG TERM 1756 2793936 - 2793953 + H 84 -6.9 -4.73613 | opp_overlap 2793927 AAGAGACCGCAGTGT CCGGGGA CACC TCACCGG TTTTCTTCCTCATAG TERM 1757 2794073 - 2794087 + G 73 -7.8 -4.14472 | opp_overlap 2794040, overlap 2794046 2794052 TGCACAGCGGCGCAG CGCACC GGC GGTGTG TTTTCGAAATGTTCG Tfu_2373 2793991 - 2795307 + | nicotinate phosphoribosyltransferase Tfu_2374 2795360 - 2795938 + | putative pyrazinamidase / nicotinamidase Tfu_2375 2797940 - 2795985 - | tyrosine protein kinase:Serine/threonine protein kinase TERM 1758 2798095 - 2798075 - R 81 -12.6 -3.83026 | GCTTGGTAGAGGAAA GGGCCTTC GTGGT GAAGGCCC GTGATGCTGCTTCGG Tfu_2376 2799130 - 2798120 - | tryptophanyl-tRNA synthetase Tfu_2377 2800234 - 2799245 - | hypothetical protein TERM 1759 2799289 - 2799314 + g 78 -6.8 -4.56597 | GTAAGGCGGCAGTGT CCGGGCCG GGGGGCGGTG CGGTCCGG TTTTTCCGGAAGAGC Tfu_2378 2801454 - 2800231 - | dihydroorotate oxidase B, electron transfer subunit TERM 1760 2800712 - 2800750 + g 83 -15.3 -3.57561 | gap 1, overlap 2800697 2800711 CCGACCCCGAAGGGG CCTGCGGC-GCCGGCTTC TCCG GAAGCGGTCAGCCGCAGG TTTCCGGCGTTGCGC TERM 1761 2801261 - 2801275 + g 70 -4.2 -4.4078 | TGGACGAAGTAGCTG CGGC CGAGTTC GCCG TTTTCGTTGGAGGGG TERM 1762 2801316 - 2801344 + g 74 -10.9 -3.7941 | AGCGGAAGTCTTGTT CAGCGCGTGCTGC CGG GGAGGGCGCGCTG TTGTTGTCAGGGCTC Tfu_2379 2802844 - 2801516 - | hypothetical protein Tfu_2380 2804012 - 2802891 - | hypothetical protein Tfu_2381 2806143 - 2804434 - | ATPase TERM 1763 2806236 - 2806204 - R 70 -14.1 -2.62184 | TCGCCCTCGACAGCA CTGTGGAGGCCGAGC CCG GCTCGACCTCCACCC CAGGCACCTGGAAAC Tfu_2382 2806464 - 2806261 - | hypothetical protein Tfu_2383 2807258 - 2806470 - | peptidase C60, sortase A and B Tfu_2384 2808152 - 2807298 - | hemin importer ATP-binding subunit Tfu_2385 2809252 - 2808149 - | FecCD-family membrane transport protein Tfu_2386 2810316 - 2809249 - | binding-protein-dependent transport lipoprotein TERM 1764 2810706 - 2810686 - g 72 -8.9 -4.08216 | TGACGGTCTCGAAAA CCTCGGGGC TCA ACCCCGACG GCGAGCAGGTCACTG Tfu_2387 2810547 - 2811335 + | hypothetical protein TERM 1765 2811381 - 2811416 + T 100 -17.6 -4.21974 | overlap 2811383 ACCGGTATCGGGGCA TACGCATGAGGCCCGC ACAC GCGGGCCTCATGGGTC TTTCTTCAGTGATGG TERM 1766 2811383 - 2811414 + T 100 -20.2 -3.70709 | overlap 2811381 CGGTATCGGGGCATA CGCATGAGGCCCGC ACAC GCGGGCCTCATGGG TCTTTCTTCAGTGAT Tfu_2388 2811705 - 2811463 - | hypothetical protein Tfu_2389 2812354 - 2811758 - | hypothetical protein TERM 1767 2812274 - 2812264 - G 83 -4.6 -4.91109 | CGTCGATCACAAAAA CCAC GGA GCGG TAGAAGTTCGGGTCC Tfu_2390 2813843 - 2812431 - | malate dehydrogenase (oxaloacetate decarboxylating) TERM 1768 2812956 - 2812982 + g 74 -12.2 -3.6502 | overlap 2812958 CCCCTGGTGGACAGC GCCGTGGACGTC GCA GACGACCACGTC TTTCGCTCCGGCGTG TERM 1769 2812958 - 2812980 + g 76 -13.4 -3.40597 | overlap 2812956 CCTGGTGGACAGCGC CGTGGACGTC GCA GACGACCACG TCTTTCGCTCCGGCG Tfu_2391 2814730 - 2814008 - | hypothetical protein Tfu_2392 2815761 - 2814832 - | putative thioredoxin TERM 1770 2815057 - 2815075 + g 81 -8.1 -4.62069 | gap 1, overlap 2815057 GTCAGTGGGATTGTC GG-CCGCC TGCT GGCGGACC TTTTTGACGTCGAGG TERM 1771 2815138 - 2815155 + g 75 -5.5 -4.57073 | gap 1, overlap 2815139 2815140 GAGGCCCATCGTGTA G-TCCGCG TTG CGCGGGTC TTTTTCCAACGCCTC TERM 1772 2815139 - 2815153 + g 70 -9.2 -3.90048 | overlap 2815138 2815140 AGGCCCATCGTGTAG TCCGCG TTG CGCGGG TCTTTTTCCAACGCC Tfu_2393 2816350 - 2815829 - | regulatory protein, MarR TERM 1773 2815965 - 2816018 + g 78 -15.9 -3.05384 | gap 1, overlap 2815935 GTGGCCCGTTCCACG ACCTCGCGGCCGGCGTCGGTGATCTC GGC GAGAGTGCCG-CGCCCGTCGCGGGGA TTGGGTCGGCGCCGG Tfu_2394 2817626 - 2816439 - | acetyl-CoA acetyltransferase Tfu_2395 2817712 - 2818155 + | methylmalonyl-CoA epimerase TERM 1774 2818218 - 2818170 - f 86 -9.6 -4.56775 | gap 1, overlap 2818157 2818172 2818173 ACCGGCGGTGAAAAA CAGCCACCCGGTTCCGCGAGAAC AATC ACCCTC-CGGAACTGGGTGGATA CTCAAGCATGCACGG TERM 1775 2818216 - 2818172 - f 75 -10 -3.90048 | gap 1, overlap 2818157 2818170 2818173 CGGCGGTGAAAAACA GCCACCCGGTTCCGCGAGAAC AATC ACCCTC-CGGAACTGGGTGGA TACTCAAGCATGCAC TERM 1776 2818215 - 2818173 - f 71 -13.5 -2.93708 | gap 1, overlap 2818157 2818172 2818170 GGCGGTGAAAAACAG CCACCCGGTTCCGCGAGAAC AATC ACCCTC-CGGAACTGGGTGG ATACTCAAGCATGCA Tfu_2396 2818591 - 2819874 + | putative cellulose-binding protein TERM 1777 2819905 - 2819939 + T 100 -20 -3.91144 | overlap 2819906 CGAGCAGCCTGCAGT AGTTGGGGCCCGGTCC GCT GGACCGGGCCCTGACG TTTGTGCGGTGTCGA TERM 1778 2819906 - 2819938 + T 100 -23.5 -2.94365 | overlap 2819905 GAGCAGCCTGCAGTA GTTGGGGCCCGGTCC GCT GGACCGGGCCCTGAC GTTTGTGCGGTGTCG Tfu_2397 2820714 - 2819980 - | hypothetical protein Tfu_2398 2821073 - 2820744 - | putative ATP/GTP-binding protein, doubtful CDS TERM 1779 2821119 - 2821135 + r 75 -15.1 -2.78384 | opp_overlap 2821130, overlap 2821105 AGGAGCGGCGGGACG GCCGGGC AAA GCCCGGC TGTGGTCGCCGAGGG Tfu_2399 2822379 - 2821183 - | 3-hydroxyacyl-CoA dehydrogenase TERM 1780 2821843 - 2821816 - G 73 -9.8 -3.85698 | gap 1, opp_overlap 2821820 2821835 CGCGTTGGCCACAAA CCCGGC-CCGGTC GCC GACCGCTACCGGG GTCTTGCCCAGCCGG Tfu_2400 2822852 - 2822466 - | hypothetical protein TERM 1781 2822644 - 2822660 + g 72 -5 -4.42748 | overlap 2822635 TCGCTGGCGAGCAGC CGCAGG AGTTG CCCGCG TTCTTTTTCGCCTGG Tfu_2401 2823000 - 2823752 + | hypothetical protein TERM 1782 2823822 - 2823807 - f 72 -9 -4.08692 | overlap 2823810 GAACCCGGGGGAAAA TCAGGG CGTT CCCTGA GCGGAACACGGATCC Tfu_2402 2823870 - 2824529 + | hypothetical protein TERM 1783 2824676 - 2824688 + F 73 -6.2 -4.36914 | CGTCGGGATTCGACA GCGC GACCA GCGC TTTTCTACGCGACAC TERM 1784 2825388 - 2825373 - g 71 -11.8 -3.66288 | opp_overlap 2825379 2825379 CACCTTCGAAGAGAA GGCGGC CCGC GCCGCC GACGCCGGAGCCGTC TERM 1785 2825859 - 2825839 - g 70 -9 -3.85698 | overlap 2825842 CGGCTCTCCGAGAAA GAACGCGA ACGGA TCGCGCTC TACCTGAACTTCGAC Tfu_2403 2824816 - 2826354 + | aminopeptidase Y TERM 1786 2826379 - 2826416 + F 73 -14.7 -2.52464 | opp_overlap 2826381 2826384 CCCCCACTGGCTGAA CACCACCCGGGGCCTGC CACG GCGGGCCCCGGGCCGTA TCCGTTCCAGACAGG TERM 1787 2826414 - 2826381 - f 88 -17.3 -3.02511 | opp_overlap 2826379, overlap 2826384 CCCACTGGCTGAACA CCACCCGGGGCCTGC CACG GCGGGCCCCGGGCCG TATCCGTTCCAGACA TERM 1788 2826411 - 2826384 - f 93 -19.8 -2.73994 | opp_overlap 2826379, overlap 2826381 ACTGGCTGAACACCA CCCGGGGCCTGC CACG GCGGGCCCCGGG CCGTATCCGTTCCAG Tfu_2404 2826505 - 2827101 + | ATP:cob(I)alamin adenosyltransferase TERM 1789 2827104 - 2827157 + T 93 -18.2 -3.23395 | gap 2, opp_overlap 2827065 2827148, overlap 2827068 2827105 CGACCGCCGCTGACC ACC--GCACGTTCGTGGCGGTGGCCG AACT CGGCCACCGCCACGAACAAGCACGGC TTACTCGTCGTCGCT TERM 1790 2827105 - 2827156 + T 100 -21.7 -2.53715 | gap 2, opp_overlap 2827065 2827148, overlap 2827068 2827104 GACCGCCGCTGACCA CC--GCACGTTCGTGGCGGTGGCCG AACT CGGCCACCGCCACGAACAAGCACGG CTTACTCGTCGTCGC Tfu_2405 2827652 - 2827158 - | putative secreted/membrane protein TERM 1791 2827417 - 2827370 - G 74 -14 -3.30124 | gap 1, overlap 2827378 TGCGACGCCCCAGAA CGACGAGACCGCGGCGCGGCAGC TCG ACTGCCG-GCCGCGGCCACAGGG AGAAGATGCGATACC TERM 1792 2827409 - 2827378 - G 84 -20.2 -2.87963 | gap 1, overlap 2827370 CCCAGAACGACGAGA CCGCGGCGCGGCAGC TCG ACTGCCG-GCCGCGG CCACAGGGAGAAGAT Tfu_2406 2828129 - 2827716 - | H+-transporting two-sector ATPase, delta/epsilon subunit Tfu_2407 2829638 - 2828196 - | F0F1 ATP synthase subunit beta Tfu_2408 2830558 - 2829644 - | H+-transporting two-sector ATPase, gamma subunit Tfu_2409 2832205 - 2830562 - | F0F1 ATP synthase subunit alpha Tfu_2410 2833087 - 2832278 - | F0F1 ATP synthase subunit delta TERM 1793 2832816 - 2832786 - G 70 -15.4 -2.78463 | ACCGTCGCCAGTACA GCGGCCTGTTCGAC CGC GTCGACCAGGTCGC GCGGCCGGGACCACT Tfu_2411 2833626 - 2833087 - | ATP synthase F0, subunit B Tfu_2412 2833882 - 2833676 - | ATP synthase F0, C subunit Tfu_2413 2834849 - 2833992 - | H+-transporting two-sector ATPase, A subunit Tfu_2414 2835215 - 2834982 - | hypothetical protein Tfu_2415 2835743 - 2835300 - | hypothetical protein Tfu_2416 2837133 - 2835970 - | putative teichoic acid linkage unit synthesis (synthesis of undecaprenylpyrophosphate-N-aetylglucosamine ) TERM 1794 2837158 - 2837186 + r 73 -11.8 -3.31905 | gap 2, overlap 2837157 GGGCCTTCCGTGGAC CG-GCCGTGCC-CT CCC AGCGGCACGGCACG TGTTCTGTGAGGGGT Tfu_2417 2838047 - 2837268 - | translation factor SUA5 Tfu_2418 2838946 - 2838089 - | modification methylase HemK TERM 1795 2838734 - 2838688 - G 76 -8 -4.2558 | gap 1, opp_overlap 2838687, overlap 2838689 GACGGGGGATGAAAA CGCCGGGGCCTACTTCCAACT CGAGAT AG-CGGAAGTAGGCGCGGCCG GTGATGTGCTGCAAG prfA 2840010 - 2838943 - | peptide chain release factor 1 rpmE 2840307 - 2840098 - | 50S ribosomal protein L31 TERM 1796 2840513 - 2840554 + r 87 -18.7 -2.71144 | opp_overlap 2840503 AACGATGCTCGGACT CACCCGTTCCGCCGGTGCA GGCC TGCACCGGCGGAACGCTAG TCGTTCGGCCCGATC rho 2842485 - 2840551 - | transcription termination factor Rho TERM 1797 2841996 - 2842010 + g 73 -7 -4.16016 | CGCTGCTCTCGGCCG CCGGGG TCT CCGCGG TTTCTTCACCGCTGC TERM 1798 2842030 - 2842057 + g 72 -8.4 -4.08394 | TTCACCGCTGCGGCG GCGGGAACGG CGACGGGT CCGTTCCGGC TTTTCAGCCGACTCT Tfu_2422 2843874 - 2842924 - | homoserine kinase Tfu_2423 2844968 - 2843904 - | threonine synthase Tfu_2424 2846472 - 2845177 - | homoserine dehydrogenase Tfu_2425 2847938 - 2846553 - | diaminopimelate decarboxylase TERM 1799 2846845 - 2846869 + g 74 -13.6 -3.25896 | opp_overlap 2846838, overlap 2846844 AGCACACAGGTGTAC TCCGCACCGT ACAGC GCGGTGCGGA TGTTGTCGCTCATAC TERM 1800 2846956 - 2847012 + g 70 -12 -3.28791 | gap 1, overlap 2847002 TCGTAGAGGGTGATG CCCGCCGGTCCGGCGATGGCGCGGCCG GGTT CGACCGCGATC-CGCGGCACCGGCAGG TTCTGGGCGGCGCAT Tfu_2426 2849275 - 2848025 - | arginyl-tRNA synthetase TERM 1801 2849097 - 2849116 + g 73 -12.8 -3.48593 | GCGTCGGGAAGGTGG GCCGCGGG GATT CCCGTGGC TTCTGTACAGGCGTG TERM 1802 2849682 - 2849705 + r 79 -11 -3.83318 | gap 1, opp_overlap 2849682, overlap 2849666 CCAGAAGACAGCAAA CCCCGGCGGCT TTC AGTC-CCGGGG TTGTGTTGTTGACAG TERM 1803 2849705 - 2849682 - R 72 -8.8 -3.95449 | gap 1, opp_overlap 2849682 2849666 CCAGAAGACAGCAAA CCCCGGCGGCT TTC AGTC-CCGGGG TTGTGTTGTTGACAG TERM 1804 2849981 - 2850016 + r 100 -28.4 -5.27335 | opp_overlap 2849976 GTCTCAGACAGGTGA TCCGCCCGCCGCATCC GCAC GGGTGCGGCGGGCGGA TTTTTCTTTGCCGGG Tfu_2427 2851542 - 2850049 - | putative carboxylesterase TERM 1805 2851185 - 2851153 - G 70 -8.4 -3.92522 | gap 1, opp_overlap 2851176 2851180 2851181, overlap 2851155 2851175 2851176 GTTGAAGCTCACAAA GACGACGCCG-TCGC GGGC GAAAGCGGCGCCGTC GTAGACGGGTTCTGA TERM 1806 2851562 - 2851573 + H 70 -5.8 -4.27441 | TTACCCCTTTCTTTA CCGA CTAG TCGG TTTCTTCCTAGTAAT Tfu_2428 2851988 - 2852761 + | hypothetical protein TERM 1807 2852774 - 2852831 + T 100 -26.5 -2.72144 | gap 1, opp_overlap 2852817, overlap 2852771 2852774 2852776 TGACTGCCCTACCCG GGGCGGGGC-ACCGGTGTGTCAGTCCTG CTG CAGGACTGACACACCGGTCGTCCAGATC GTTTCGGCCCCGTGC TERM 1808 2852774 - 2852832 + T 100 -20.5 -3.53811 | gap 2, opp_overlap 2852817, overlap 2852771 2852774 2852776 TGACTGCCCTACCCG -GGGCGGGGC-ACCGGTGTGTCAGTCCTG CTG CAGGACTGACACACCGGTCGTCCAGATCG TTTCGGCCCCGTGCG TERM 1809 2852776 - 2852829 + T 100 -25.5 -2.90615 | gap 1, opp_overlap 2852817, overlap 2852771 2852774 2852774 ACTGCCCTACCCGGG GCGGGGC-ACCGGTGTGTCAGTCCTG CTG CAGGACTGACACACCGGTCGTCCAGA TCGTTTCGGCCCCGT Tfu_2429 2853994 - 2853074 - | streptomycin 6-kinase TERM 1810 2854434 - 2854451 + r 80 -4.7 -4.72863 | overlap 2854435 2854436 GATACCGTCTCACTC CTCCGCG CTGC CGCGGGA TTTTCCTTTCTTTGC Tfu_2430 2855397 - 2854708 - | hypothetical protein Tfu_2431 2855943 - 2857247 + | hypothetical protein TERM 1811 2857228 - 2857277 + F 91 -16.9 -3.54741 | TCGCCGCTGCCGAAG CCGCGCTGGCGGAGCAGTGACCC GCGC GGGGCGCCGCACCGCCACCGCCG TTTGCCGAAGTGCTC Tfu_2432 2857664 - 2858473 + | hypothetical protein TERM 1812 2858535 - 2858525 - f 72 -8.2 -4.19238 | opp_overlap 2858525 2858532, overlap 2858526 CCTGGAAGGTCAAAA GCCC TGC GGGC AAGGCTCTACTCTGG Tfu_2433 2858555 - 2859112 + | peptide deformylase Tfu_2434 2859261 - 2860235 + | hypothetical protein Tfu_2435 2861081 - 2860284 - | putative hydrolase TERM 1813 2860722 - 2860697 - G 79 -11.7 -4.08216 | TGACGCCGCCGAAAA GGCCGGCGTGG CGGA CCGCGACGGCC GCCCCCATGGAGAAC Tfu_2436 2861943 - 2861146 - | hypothetical protein Tfu_2437 2863996 - 2862035 - | peptidase M20D, amidohydrolase TERM 1814 2863074 - 2863093 + g 71 -11.4 -3.65827 | GGTTCGCGGGGGGCT GCCGAGGC AGCG GCTTCGGC TTTGACTACGCGTTC TERM 1815 2863920 - 2863908 - G 72 -9.1 -3.97636 | AGGTCAACGTAGAAA CCCTC GAC GAGGG GGAAAATCTCGTCGA Tfu_2438 2864705 - 2865094 + | hypothetical protein TERM 1816 2865121 - 2865151 + T 70 -7.4 -4.02334 | opp_overlap 2865129 GGGCTCTGGGATGGC GGTCAATACCGGCC CAG GGCTGGCGCTGGCC TTTGTCCTCTGCCTG Tfu_2439 2866298 - 2865327 - | hypothetical protein Tfu_2440 2866473 - 2867969 + | inositol-5-monophosphate dehydrogenase TERM 1817 2869180 - 2869193 + G 71 -9.5 -3.74872 | GACGAGCCGAAGCGC GCCGC TGCG GCGGC TTTCCTGGACTACCT Tfu_2441 2868163 - 2869992 + | von Willebrand factor, type A Tfu_2442 2870019 - 2870681 + | hypothetical protein Tfu_2443 2870725 - 2871120 + | hypothetical protein Tfu_2444 2871390 - 2873900 + | ATP-binding region, ATPase-like Tfu_2445 2873897 - 2874337 + | hypothetical protein Tfu_2446 2874350 - 2874727 + | hypothetical protein TERM 1818 2875268 - 2875239 - g 71 -10.9 -3.54424 | gap 1, overlap 2875242 CGCGAGTCGTGCAAA GAAGTGCT-GATCA CGC TGATCCAGCACCTC CAGTCCAGGGCGGCC TERM 1819 2875265 - 2875242 - g 70 -9 -3.9122 | gap 1, overlap 2875239 GAGTCGTGCAAAGAA GTGCT-GATCA CGC TGATCCAGCAC CTCCAGTCCAGGGCG Tfu_2447 2874708 - 2875295 + | putative ATP/GTP-binding protein TERM 1820 2875288 - 2875342 + F 91 -15.1 -3.93769 | overlap 2875283 CCAGGGCGGCCAGCA CGG-TGTGATGCTTGGTGGTCGCTGAT CGC ATCAGCGGCCACCC-GCACCCCATCCG TTGCTTTTTTCACAT Tfu_2448 2875468 - 2876427 + | hypothetical protein TERM 1821 2876814 - 2876803 - g 81 -7.2 -4.59853 | GGAACTGCTCAAAAA CGGC GACC GCCG GAACGTGGTGGACCG Tfu_2449 2876654 - 2877337 + | tRNA/rRNA methyltransferase TERM 1822 2879762 - 2879795 + G 78 -10.1 -4.1196 | gap 1 GCCTACCGGCTGCTG GCCCGGCGG-CCGCGG ATC CGGCGGGCCGCCCAGC TTTTCGAGATCGCTT Tfu_2450 2877461 - 2880319 + | DEAD/DEAH box helicase, N-terminal TERM 1823 2880360 - 2880395 + T 100 -26.2 -2.87132 | opp_overlap 2880337, overlap 2880338 GCTGCCTTCATGCGG GCGGGCCCGTCCTTCC CCAG GGGAGGGCGGGCCCGC TGTCTGAAGCCGAAG Tfu_2451 2881165 - 2880419 - | succinate dehydrogenase/fumarate reductase iron-sulfur subunit sdhA 2883102 - 2881162 - | succinate dehydrogenase flavoprotein subunit Tfu_2453 2883819 - 2883103 - | succinate dehydrogenase subunit C Tfu_2454 2883899 - 2884852 + | lysR family transcriptional regulator Tfu_2455 2886045 - 2884864 - | putative monooxygenase (putative secreted protein) Tfu_2456 2888191 - 2886239 - | GTP-binding protein TypA Tfu_2457 2888696 - 2888253 - | putative mutT-like protein Tfu_2458 2889980 - 2888706 - | putative acyltransferase Tfu_2459 2890119 - 2891054 + | hypothetical protein Tfu_2460 2891113 - 2891997 + | phosphoribose diphosphate:decaprenyl-phosphate phosphoribosyltransferase Tfu_2461 2892024 - 2893382 + | putative oxidoreductase Tfu_2462 2893400 - 2894167 + | putative short chain dehydrogenase TERM 1824 2894244 - 2894267 + T 75 -3.8 -4.66938 | gap 1, overlap 2894250 CTCCCCGGTGCTTTC CTGAG-CGGGC ACT GCCCTATTCAG TTTTCTCTTCCAGGT Tfu_2463 2896083 - 2894260 - | hypothetical protein Tfu_2464 2896189 - 2897064 + | methylase involved in ubiquinone/menaquinone biosynthesis TERM 1825 2897094 - 2897147 + G 74 -11 -3.79113 | opp_overlap 2897132 2897135, overlap 2897132 TTCCGCGCCACGGTG GGCC-GGTCGGTGCGGCTGTTCGCGG CGTT CCGCAAAGAGCAG-ACCGACCCGGAC TTCTTCTACGGCACT Tfu_2465 2897061 - 2897801 + | hypothetical protein Tfu_2466 2898843 - 2897854 - | hypothetical protein Tfu_2467 2903051 - 2898840 - | hypothetical protein Tfu_2468 2904394 - 2903048 - | putative glycosyltransferase Tfu_2469 2906552 - 2904867 - | hypothetical protein Tfu_2470 2908059 - 2906539 - | fibronectin, type III Tfu_2471 2908295 - 2909197 + | hypothetical protein Tfu_2472 2909723 - 2909205 - | flavoprotein Tfu_2473 2910106 - 2911263 + | N-acetylglucosamine 6-phosphate deacetylase Tfu_2474 2911551 - 2911877 + | hypothetical protein TERM 1826 2911958 - 2911921 - T 100 -32.9 -5.39721 | opp_overlap 2911923 CCAGCACACAAAAAA CTGCGGCGGCCGGTGCA TTTC TGCACCGGCCGCCGCAG CAGCGACGCGTGGAG TERM 1827 2912517 - 2912474 - T 95 -16.1 -3.97406 | gap 3, overlap 2912465 CGAAAACTGGAGAAA CCCCCGCGGGC-GCG--GACGA GAT CCGTCGACGCTGCCCGCGAGGG CCGGCCGGTAGGGTC Tfu_2475 2914752 - 2912821 - | cell division protein FtsI/penicillin-binding protein 2 smpB 2915247 - 2914765 - | SsrA-binding protein Tfu_2477 2916197 - 2915289 - | cell division protein FtsX Tfu_2478 2917005 - 2916316 - | cell division ATP-binding protein FtsE TERM 1828 2916829 - 2916843 + g 82 -11.4 -4.1043 | ACCCGCGACGTGGAC CCGACC TTT GGTCGG TTTCTCCTCTTTGAG prfB 2918474 - 2917347 - | peptide chain release factor 2 TERM 1829 2918305 - 2918295 - G 71 -2.4 -4.62069 | TTCCGACTCCAAAAA GGAG AGC CGCC GCGTGACCTTCTGCG Tfu_2480 2919389 - 2918550 - | hypothetical protein TERM 1830 2919437 - 2919472 + r 100 -27.6 -2.79796 | CCAACCCCCGCAGCG TGCGGGCCGGGGCCGC TGCT GCGGTCCCGGCCCGCG TCTGCTCAGGTCAGC Tfu_2481 2924341 - 2919488 - | glutamate dehydrogenase (NAD) TERM 1831 2920511 - 2920550 + g 76 -13.5 -3.40403 | gap 1, opp_overlap 2920506 GGCGAACTCAGGCCC GGTGAGCCCGCGCCCGGC CGACC GCCGGGC-CGCGATCGCC TTGTCGTCGGGCAGG TERM 1832 2922423 - 2922408 - G 70 -3.2 -4.39426 | opp_overlap 2922416 CACAGCGCGACAAAA GCCTCT TCGA ACAGGC CTGCCACCTGCTCTA TERM 1833 2924683 - 2924639 - R 79 -7.2 -4.47485 | gap 1, opp_overlap 2924638 2924647, overlap 2924647 AAAAACTGGACAAAA TGGATA-AAGCCGTCCGCTAG TGCG CTGGTGAACGGCTGATATCCA CTCTCTGACAGTACC TERM 1834 2924674 - 2924647 - R 71 -7.6 -4.07786 | opp_overlap 2924638 2924647, overlap 2924639 GACAAAATGGATAAA GCCGTCCGCTAG TGCG CTGGTGAACGGC TGATATCCACTCTCT Tfu_2482 2925491 - 2924754 - | phosphatase Tfu_2483 2926078 - 2925626 - | hypothetical protein Tfu_2484 2926814 - 2926158 - | HAD family hydrolase Tfu_2485 2926937 - 2928133 + | acyl-CoA dehydrogenase TERM 1835 2928137 - 2928183 + T 89 -18.7 -2.87344 | gap 1 CGGCACTCCTGATCG CGACCACGCCGAGGTC-CCCGC CCCA GCGGGAGACCTCGGCGTCCGCG TGTCTGCGCAGGCTC Tfu_2486 2929855 - 2928197 - | glycosyl hydrolase TERM 1836 2928704 - 2928733 + g 73 -12 -3.53091 | CTGCTCCGCGTCAGC CGGCGCCGCGTC GAACAG GCCGCGGCGCAG TTTCAACCGCAGGAT TERM 1837 2929243 - 2929224 - G 73 -12.8 -3.53012 | CCGCCGTCTTGGAAA GCCGCCAC CTCG GCGGCGGC CAGCTCCCCGACAAG Tfu_2487 2930200 - 2929937 - | phosphoryl transfer system, HPr Tfu_2488 2930910 - 2930197 - | HAD family hydrolase Tfu_2489 2931350 - 2930901 - | putative phosphoenolpyruvate-dependent sugar phosphotransferase TERM 1838 2931612 - 2931572 - R 100 -23.4 -3.49653 | gap 1 ACTATCCGCACATAA CCG-GCAGCGGTCCCAGGG ACGT CCCTGGGACCGCTGCACTG TCAGCCGTCACACAC Tfu_2490 2934526 - 2931620 - | preprotein translocase subunit SecA Tfu_2491 2935391 - 2934663 - | LuxR response regulator receiver TERM 1839 2934881 - 2934902 + g 74 -11.5 -3.74872 | GCAGCACCTCGGTTT CCCTCTCGG TCAG CCGGGGGGG TTTCGTGGGCTGGCT TERM 1840 2934910 - 2934926 + g 72 -4.3 -4.54727 | overlap 2934904 CGGGGGGGTTTCGTG GGCTGGC TCC GTCGGTC TTTTCCTTTCCGGGC TERM 1841 2935167 - 2935184 + g 74 -12.7 -3.57144 | CTTGATCCCCGCGCA CGCAGCG ATCC CGCTGCG TTTCGGCATCCGCAC TERM 1842 2935536 - 2935587 + r 82 -15.8 -3.07962 | opp_overlap 2935559, overlap 2935531 2935529 CGTTGGAGCGCCGTA CCCCACGGTGTGTCGTGCCGAAAC CGGG GCTTCGGCACGACACACCGGACGC TATTCAGATGTAGGA Tfu_2492 2936287 - 2935607 - | SSU ribosomal protein S30P / sigma 54 modulation protein TERM 1843 2936633 - 2936599 - R 88 -13.6 -3.86015 | gap 1, overlap 2936604 2936605 TACCGCCCCCACAAA CACAAGGGG-GCGCC CGTGAC GGCGCGCCCCGTGTG GACAGAAAGTGTCAC TERM 1844 2936629 - 2936604 - R 81 -12.5 -3.89695 | gap 1, overlap 2936599 2936605 CCCCCACAAACACAA GGGGGCGC-CCG TGA CGGCGCGCCCCG TGTGGACAGAAAGTG TERM 1845 2936628 - 2936605 - R 81 -16 -2.93335 | gap 1, overlap 2936604 2936599 CCCCACAAACACAAG GGGGCGC-CCG TGA CGGCGCGCCCC GTGTGGACAGAAAGT Tfu_2493 2937779 - 2936925 - | hypothetical protein Tfu_2494 2939693 - 2937813 - | lipoprotein LpqB Tfu_2495 2941429 - 2939690 - | sensor histidine kinase TERM 1846 2940188 - 2940212 + g 74 -14.3 -3.3095 | CGGCTCGGTAGGCAG GCGCAGGATCA CCT TGATCCCGCGC TTCTCCGCGATCTGT Tfu_2496 2942128 - 2941451 - | response regulator receiver Tfu_2497 2942570 - 2943862 + | hypothetical protein TERM 1847 2943925 - 2943951 + G 72 -4.2 -4.62783 | opp_overlap 2943928, overlap 2943936 GACCCCGTCTACGAC GAAGCCCGGCCG TCC CTGCTGGACCTC TTTTTCCGCTGGGTG Tfu_2498 2943862 - 2944473 + | putative integral membrane protein Tfu_2499 2944470 - 2945618 + | hypothetical protein Tfu_2500 2945615 - 2946598 + | ATPase Tfu_2501 2946635 - 2947936 + | hypothetical protein Tfu_2502 2948965 - 2947970 - | putative integral membrane protein TERM 1848 2949319 - 2949368 + G 100 -20.7 -3.53811 | GAGGCGCTGCCCGTC GCCATCGGGTTGACCCTGACCGT GCTG ACGGTCGTGGGCTACCCGGTGGC TTTCGAAACCCTCAG Tfu_2503 2949118 - 2949912 + | hypothetical protein Tfu_2504 2949985 - 2950737 + | putative integral membrane protein Tfu_2505 2952668 - 2951232 - | S-adenosyl-L-homocysteine hydrolase TERM 1849 2952535 - 2952545 + g 81 -2.4 -5.08824 | overlap 2952527 CCCGTGATCTTCGCA CCCC GAA GCGG TTTTTTCGGTCCGAA TERM 1850 2953019 - 2953039 + G 74 -13.9 -3.34398 | opp_overlap 2952996, overlap 2953017 GCCCCAGCCACCAGT GGCCGGCCC ACC GGGCCCGCC TGTTTCGCAGACACA Tfu_2506 2952880 - 2954139 + | hypothetical protein Tfu_2507 2955437 - 2954172 - | tyrosine protein kinase:Serine/threonine protein kinase Tfu_2508 2956577 - 2955468 - | hypothetical protein TERM 1851 2956167 - 2956123 - G 70 -8.3 -3.91911 | GGCAGGGCAACGAAA GGGGCACGGGCCCGCTCGG CGAGCTC CCGCAAGGGCCCGCTCCGC GGTCCTACCGCCACG Tfu_2509 2956828 - 2956652 - | hypothetical protein manB 2958237 - 2956870 - | phosphomannomutase/phosphoglucomutase Tfu_2511 2958864 - 2958418 - | hypothetical protein TERM 1852 2958523 - 2958549 + g 90 -7.1 -5.0133 | GCGGATGGTCTCGAT CCCCTGCCCGG TGGGC TCGGGCCGCGG TTTTTTGACAGGCTG TERM 1853 2959202 - 2959227 + G 75 -4.7 -4.58395 | gap 1 CCTCAAGTGCCGCGC GGGGTGACCG CTGAGGA CGG-CATCCC TTTTTCCCGACTGGA Tfu_2512 2958971 - 2959405 + | hypothetical protein Tfu_2513 2960885 - 2959470 - | hypothetical protein TERM 1854 2960902 - 2960949 + r 72 -13.2 -3.08464 | gap 1 GGGCCCCCTCTCCTC GCTGGCGGCTGTGCCGTCGGCCG CGG CGGCCG-CGGCCCGCCCGGCGGG TTCCCTCCGTGGTGC Tfu_2514 2964106 - 2960882 - | hypothetical protein TERM 1855 2964352 - 2964318 - R 100 -17.9 -4.83593 | opp_overlap 2964318 AAGAACTACCAAAAA GCGTGCGCCTCGGAT AAAAA AACCGAGACGCACGC TGTGGTGTGCTGTGA TERM 1856 2964318 - 2964352 + r 80 -15.7 -2.8844 | opp_overlap 2964318 AAGAACTACCAAAAA GCGTGCGCCTCGGAT AAAAA AACCGAGACGCACGC TGTGGTGTGCTGTGA Tfu_2515 2964662 - 2964369 - | WhiB family transcriptional regulator Tfu_2516 2966344 - 2964875 - | hypothetical protein Tfu_2517 2966467 - 2967528 + | LPPG:FO 2-phospho-L-lactate transferase Tfu_2518 2967525 - 2968796 + | F420-0--gamma-glutamyl ligase TERM 1857 2968859 - 2968807 - T 78 -14 -3.29511 | gap 1, overlap 2968808 GGTAGCCCGCGAGAA CCG-GGGACGTGGCGGCCGCGCTTC CGGG GAGGCGCGGCCGCCACGGGCAGCAA GCCCGGATCAGACCA TERM 1858 2968856 - 2968808 - T 81 -16.6 -2.57564 | gap 1, overlap 2968807 GTAGCCCGCGAGAAC CGGGGACGTGGCGGCCGCGCTTC CGGG GAGGCGCGGCCGCCACGGGCA-G CAAGCCCGGATCAGA fbiC 2971482 - 2968867 - | FO synthase TERM 1859 2970803 - 2970855 + g 70 -8.2 -3.86897 | gap 1, overlap 2970806 ATGCCCGTGGTGAAG GGGACCGTGGAGCGTC-CCGCGTCT TCGA GGACGCGCAGCCGCACCACGGGGTC TTTGTCCGGGCTGCC Tfu_2520 2972333 - 2971632 - | methylase involved in ubiquinone/menaquinone biosynthesis Tfu_2521 2972471 - 2973364 + | hypothetical protein Tfu_2522 2974462 - 2973368 - | glycosyl transferase Tfu_2523 2975393 - 2974476 - | fused dolichol-phosphate mannosyltransferase/uncharacterized protein Tfu_2524 2975515 - 2977221 + | hypothetical protein Tfu_2525 2977250 - 2978422 + | hypothetical protein Tfu_2526 2978448 - 2979884 + | cell envelope-related transcriptional attenuator Tfu_2527 2982086 - 2979906 - | glycosyltransferase TERM 1860 2980605 - 2980628 + g 77 -4.4 -4.70659 | opp_overlap 2980619, overlap 2980607 GTCCGCGTAGTGCTG GCTGACGCAG ATGA CCGCGTCGAC TTTTTCGATGTCGAG Tfu_2528 2983838 - 2982183 - | hypothetical protein Tfu_2529 2984404 - 2985723 + | putative UDP-glucose/GDP-mannose dehydrogenase Tfu_2530 2985807 - 2986583 + | hypothetical protein TERM 1861 2986594 - 2986636 + T 71 -11.8 -3.29511 | overlap 2986597 TCTAGGCCCGCCGCA TGCACAGTGGCCCACTCCGC CGC GCGGGGTGGGCCACACCTCG TTCTACGCCGCTGCG TERM 1862 2986597 - 2986633 + T 73 -14.3 -2.82742 | overlap 2986594 AGGCCCGCCGCATGC ACAGTGGCCCACTCCGC CGC GCGGGGTGGGCCACACC TCGTTCTACGCCGCT Tfu_2531 2987670 - 2986657 - | putative glycosyltransferase Tfu_2532 2988529 - 2987783 - | putative transferase Tfu_2533 2989580 - 2988531 - | putative glycerol 1-phosphate dehydrogenase TERM 1863 2989274 - 2989295 + g 71 -9.5 -3.74872 | gap 1 CCGCGATCATCGGGA TTC-CCGCCA TGG TGGCGGCGAA TTTAGTGACGTCGAT Tfu_2534 2990317 - 2989586 - | putative nucleotide sugar-1-phosphate transferase Tfu_2535 2990973 - 2990335 - | hypothetical protein Tfu_2536 2991842 - 2990982 - | hypothetical protein Tfu_2537 2992723 - 2991938 - | ABC-type polysaccharide/polyol phosphate transport system ATPase component Tfu_2538 2993553 - 2992723 - | lipopolysaccharide exporter Tfu_2539 2993981 - 2994730 + | 4-diphosphocytidyl-2C-methyl-D-erythritol synthase Tfu_2540 2994727 - 2995494 + | glycerophosphoryl diester phosphodiesterase, putative TERM 1864 2995490 - 2995539 + T 74 -12.9 -3.1996 | gap 1, opp_overlap 2995497 2995499, overlap 2995478 2995476 2995494 2995494 CGGCCGCGTCCTCTG CATAGGACACCGGTCCTTTCCCCA GGC TGGGGAAAGGACCG-TGCACTCAG TTGGCTTGGGCTTTC TERM 1865 2995494 - 2995535 + T 81 -16.7 -2.57013 | gap 1, opp_overlap 2995497 2995499, overlap 2995478 2995476 2995494 2995490 CGCGTCCTCTGCATA GGACACCGGTCCTTTCCCCA GGC TGGGGAAAGGACCG-TGCAC TCAGTTGGCTTGGGC TERM 1866 2995532 - 2995497 - T 100 -21.4 -2.62184 | gap 1, opp_overlap 2995478 2995476 2995494 2995494 2995490, overlap 2995499 GTCCTCTGCATAGGA CACCGGTCCTTTCCCCA GGC TGGGGAAAGGACCG-TG CACTCAGTTGGCTTG TERM 1867 2995531 - 2995499 - T 100 -20.7 -2.85351 | opp_overlap 2995478 2995476 2995494 2995494 2995490, overlap 2995497 CCTCTGCATAGGACA CCGGTCCTTTCCCCA GGC TGGGGAAAGGACCGT GCACTCAGTTGGCTT Tfu_2541 2996561 - 2995536 - | putative glycosyl transferase TERM 1868 2996146 - 2996156 + g 70 -8.2 -3.85817 | TTCGACGTCATCGCG GCGG CCA CCGC TTTCTCCCACGGGGT Tfu_2542 2996812 - 2998341 + | cell envelope-related transcriptional attenuator Tfu_2543 2998470 - 2999099 + | hypothetical protein Tfu_2544 2999264 - 3000652 + | UDP-glucose 6-dehydrogenase Tfu_2545 3000689 - 3001105 + | hypothetical protein Tfu_2546 3001705 - 3001172 - | 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase Tfu_2547 3002859 - 3001702 - | phosphoribosylaminoimidazole carboxylase Tfu_2548 3002967 - 3003434 + | hypothetical protein TERM 1869 3003568 - 3003600 + F 77 -4.7 -4.59109 | opp_overlap 3003568 3003570 3003571, overlap 3003570 3003570 GAGGACTGCGCGAAA TAGGCAACACCTGGC GAA GACAGGAGTTGCACA TTTTTAGGAAATCTC Tfu_2549 3003672 - 3004340 + | response regulator receiver Tfu_2550 3004367 - 3005650 + | sensor histidine kinase Tfu_2551 3006295 - 3005666 - | putative hydrolase Tfu_2552 3007403 - 3006393 - | adenylate cyclase Tfu_2553 3008485 - 3007586 - | biotin--acetyl-CoA-carboxylase ligase TERM 1870 3008484 - 3008442 - G 100 -22 -3.37344 | opp_overlap 3008449, overlap 3008443 GTCCCATTCAAGCAA CGGCGAAGCCGCCTTCCCCC GCA GGGAGAGGGCGGCTTTGCCA TGGAATTGCCGCAGC TERM 1871 3008483 - 3008443 - G 95 -23.3 -2.62192 | opp_overlap 3008449, overlap 3008442 TCCCATTCAAGCAAC GGCGAAGCCGCCTTCCCCC GCA GGGAGAGGGCGGCTTTGCC ATGGAATTGCCGCAG TERM 1872 3008449 - 3008477 + g 93 -18.1 -3.61103 | opp_overlap 3008443 3008442 TCAAGCAACGGCGAA GCCGCCTTCCCCC GCA GGGAGAGGGCGGC TTTGCCATGGAATTG Tfu_2554 3011134 - 3008507 - | phosphoenolpyruvate carboxylase TERM 1873 3011260 - 3011248 - H 70 -5.5 -4.27443 | overlap 3011249 TTATCATCAAAAGAA GTCCC GTG GAGAC GGAATGTGCCAGGTC TERM 1874 3012190 - 3012159 - g 71 -10.9 -3.61398 | gap 1 CCTGCCCTCCAACAA CCTGGACGAG-CCG CCCGT CGAACCCGTCCAGG TGACCCTGGAGGTGA Tfu_2555 3011359 - 3012963 + | propionyl-CoA carboxylase complex B subunit TERM 1875 3013097 - 3013145 + G 80 -15.9 -3.15544 | gap 2 CCAGGCCGCCCGCAG CCGGGCCGCGGGCGCTGCCCCCC GCTCA GGCTGGC-GCGACCGCG-CCCGG TTGCTCGGCGTGCCG Tfu_2556 3012963 - 3013208 + | hypothetical protein TERM 1876 3013793 - 3013779 - g 70 -8.5 -3.91911 | CCCATCGCAATCAAA GCCGC GTTCG GCGGC GGTGGGCGCGGCCTG Tfu_2557 3013308 - 3015071 + | putative acyl-CoA carboxylase, alpha subunit Tfu_2558 3015368 - 3016654 + | hypothetical protein TERM 1877 3016685 - 3016713 + T 100 -20.3 -3.96148 | opp_overlap 3016676 ACACCAGGCAGCGTA GGGGTCTCGGCTG ATC CGGCCGGGACCCC TTTCTCCTCGGGCAG Tfu_2559 3018133 - 3016751 - | flavoprotein disulfide reductase TERM 1878 3016948 - 3016915 - G 70 -8.2 -3.8211 | gap 1, overlap 3016916 GCGGACCGACAATAA CGCCGCCGAGCAC GATCCCGGT GTGCT-GGCGGCA GATGAGCTTGACGAA Tfu_2560 3018309 - 3018758 + | hypothetical protein TERM 1879 3018823 - 3018800 - f 70 -13.8 -2.64099 | overlap 3018799 CTTTCGGAGGAGAAG CGCCACGCCC GCAT GGTCGTGGCG GACGTCCGCCTCCCC Tfu_2561 3018812 - 3019078 + | hypothetical protein Tfu_2562 3019700 - 3019128 - | hypothetical protein Tfu_2563 3020800 - 3019697 - | adenosine deaminase Tfu_2564 3022097 - 3020865 - | peptidase M20D, amidohydrolase TERM 1880 3021726 - 3021683 - G 83 -13 -4.07568 | gap 1, opp_overlap 3021715, overlap 3021684 3021686 CGGCCGGCTGGAAAA GCAGCCGGACCCGGCCGG-GC AGC GCACCGGCCCGCTCCTGCTGG GCGAGGAACAGGCCG TERM 1881 3021725 - 3021684 - G 78 -16.5 -3.04398 | gap 1, opp_overlap 3021715, overlap 3021683 3021686 GGCCGGCTGGAAAAG CAGCCGGACCCGGCCGG-GC AGC GCACCGGCCCGCTCCTGCTG GGCGAGGAACAGGCC Tfu_2565 3023283 - 3022084 - | carboxylate-amine ligase Tfu_2566 3023891 - 3025078 + | galactokinase TERM 1882 3025832 - 3025804 - g 73 -12.4 -3.4691 | gap 1, overlap 3025798 AGCCAACAAGATCAA CGCCGCCTA-CGC GGAG GCGCTCGGCGGCG GCCCCGCCACCCTGG Tfu_2567 3025187 - 3026401 + | cell envelope-related transcriptional attenuator TERM 1883 3026463 - 3026433 - T 100 -20.5 -2.82834 | gap 1, overlap 3026435 GACGTGACCAGTAGA GAGGCCCCGC-GCG TGCT CGCTGCGGGGCCTC CCTGGTGACGCTCCT TERM 1884 3026461 - 3026435 - T 88 -17.3 -2.96216 | gap 1, overlap 3026433 CGTGACCAGTAGAGA GGCCCCGC-GCG TGCT CGCTGCGGGGCC TCCCTGGTGACGCTC TERM 1885 3026655 - 3026622 - T 71 -10.2 -3.57615 | gap 1, overlap 3026589 3026625 CCAAGAGTGCGCAAA CCACTGCGCGGCCGC TCCGG GCGTC-GCGCCGTGG CACCGGGCCGCCGAA Tfu_2568 3027923 - 3026703 - | isocitrate dehydrogenase Tfu_2569 3028670 - 3028143 - | putative integral membrane protein Tfu_2570 3028878 - 3029597 + | forkhead-associated TERM 1886 3029649 - 3029593 - T 100 -23.8 -3.06183 | gap 1 GGCAGCGTCAGGCAA GCTG-ACCGTCCGGTGGGAGGTCCGAC CCAC GTCGGGCCTCCCACCGACCGGTTCAGG ACAGCGACCGCTCCG Tfu_2571 3030496 - 3029645 - | methenyltetrahydrofolate cyclohydrolase purH 3032123 - 3030555 - | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase TERM 1887 3031191 - 3031242 + g 70 -3.7 -4.46212 | opp_overlap 3031167 3031194, overlap 3031193 3031194 3031207 GGCGATCACCCCACC AAACGCCGACACCGGATCGC-AGGC GTGC GCCTTGCGATGTGCT-TCGGCGATA TTTTCTCCTACAGCG TERM 1888 3031685 - 3031704 + g 70 -8.6 -3.90744 | gap 1, overlap 3031689 GGGCCGGGTCCACGA CCACCGCGA CAC TCGCG-TGG TTCTTTGCCGCGGCC TERM 1889 3031970 - 3031951 - G 73 -7.1 -4.11773 | overlap 3031939 AAACACTCGGGAAAA CCGGTGA CGGATT CCACCGG GGTGACTGCGACCCC Tfu_2573 3032707 - 3032120 - | phosphoribosylglycinamide formyltransferase Tfu_2574 3033028 - 3033456 + | hypothetical protein Tfu_2575 3034931 - 3033453 - | hypothetical protein TERM 1890 3035074 - 3035039 - R 100 -21.9 -3.7511 | CTCCGGAGAACAGAA CGGAGGGCCCGCCCC TCCGCG GGAGCAGGCCCTCCG ACACGCGTAGCGTGT Tfu_2576 3035967 - 3035089 - | succinyl-CoA synthetase subunit alpha sucC 3037220 - 3035988 - | succinyl-CoA synthetase subunit beta TERM 1891 3036038 - 3036060 + g 72 -13.4 -3.23899 | overlap 3036033 CGCCGTCCATGGTGT CCACCTGGCG GAC CGCTGGGTGG TTACGTTCGTTGAGG Tfu_2578 3038253 - 3037459 - | hypothetical protein Tfu_2579 3038435 - 3038713 + | hypothetical protein TERM 1892 3038989 - 3038967 - T 100 -9.1 -4.97402 | opp_overlap 3038969, overlap 3038969 GAAAAGGCACAAAAA TAGGCCCCT GCGCG AGGGGCCTT AATTCAGAGAAAACG TERM 1893 3038987 - 3038969 - T 81 -11.7 -4.08693 | opp_overlap 3038969, overlap 3038967 AAAGGCACAAAAATA GGCCCCT GCGCG AGGGGCC TTAATTCAGAGAAAA TERM 1894 3038969 - 3038987 + T 70 -11.7 -3.33696 | opp_overlap 3038969 3038967 AAAGGCACAAAAATA GGCCCCT GCGCG AGGGGCC TTAATTCAGAGAAAA TERM 1895 3039009 - 3039056 + T 83 -2.6 -5.14477 | gap 1, opp_overlap 3039004 3039009 CAGAGAAAACGAAAA GGAGAGGG-GCAGGAAAGAGG ACCAAAG CCTCACATCTACTCCCTCTCC TTTTTTGCGTGTGTG TERM 1896 3039056 - 3039009 - T 80 -4.8 -4.75518 | gap 1, opp_overlap 3039009, overlap 3039004 CAGAGAAAACGAAAA GGAGAGGG-GCAGGAAAGAGG ACCAAAG CCTCACATCTACTCCCTCTCC TTTTTTGCGTGTGTG TERM 1897 3040395 - 3040406 + T 74 -2.2 -4.7254 | CGTCTTACGACTTCG CACG GACC TGTG TTTTTAGTAAACAGT Tfu_2580 3047295 - 3045031 - | ATP-dependent DNA helicase PcrA TERM 1898 3045347 - 3045322 - G 71 -2.5 -4.57341 | AATCTCGTCCAAAAA CCGCGAC GGAGGGTTGTAG GCCGCGG CCCCCCAGGAGCTGC TERM 1899 3045862 - 3045888 + g 70 -9.4 -3.82097 | overlap 3045878 GGCAGCCAGCTCCTC GAGTTCTTCGAG GAG CGCGACGAACTC TTTGATCGCTTTGAG TERM 1900 3046332 - 3046348 + g 72 -4.4 -4.56597 | gap 1, opp_overlap 3046319 TAGGCTCGCCCTCTC CCTG-GG CGGA CCACAGG TTTTTCGGGCGGCGC Tfu_2581 3047393 - 3048322 + | inosine-uridine preferring nucleoside hydrolase Tfu_2582 3049029 - 3048328 - | LuxR response regulator receiver Tfu_2583 3050271 - 3049087 - | putative two-component system sensor kinase Tfu_2584 3050420 - 3051829 + | hypothetical protein Tfu_2585 3051816 - 3052022 + | hypothetical protein Tfu_2586 3052205 - 3052702 + | carbon monoxide dehydrogenase Tfu_2587 3052699 - 3053562 + | molybdopterin dehydrogenase Tfu_2588 3053677 - 3054696 + | hypothetical protein TERM 1901 3054735 - 3054770 + T 100 -19.8 -3.02511 | gap 1, opp_overlap 3054736 GCGGGGGTGAAGACA ACGC-ACGGCTCCCCTG GTG CAGGGGAGCCGTTGCGG TCTTCGCGGCGTGGG TERM 1902 3054769 - 3054736 - T 100 -23.3 -3.65812 | gap 1, opp_overlap 3054735 CGGGGGTGAAGACAA CGC-ACGGCTCCCCTG GTG CAGGGGAGCCGTTGCG GTCTTCGCGGCGTGG guaA 3056445 - 3054859 - | bifunctional GMP synthase/glutamine amidotransferase protein gabD2 3058182 - 3056605 - | succinic semialdehyde dehydrogenase Tfu_2591 3059311 - 3058298 - | UDP-galactose 4-epimerase TERM 1903 3059221 - 3059243 + g 74 -13.4 -3.29144 | opp_overlap 3059217 3059218 TGTTGCGCAAATTGT CGACCACGAC CAC GTCGTGGCCG TTCTCCAACAGCTCG Tfu_2592 3060791 - 3059448 - | putative phosphatase TERM 1904 3060282 - 3060247 - G 78 -10.4 -4.14392 | gap 1, overlap 3060248 CGGTAACCGGGAAAA GGCACCAGTCG-CACCG TGA CGGTGTCGACCGTTGCG GGATCGCGGAGCACG Tfu_2593 3062617 - 3060800 - | glycerol-3-phosphate dehydrogenase TERM 1905 3062529 - 3062579 + g 77 -14.7 -3.11634 | opp_overlap 3062574, overlap 3062524 3062558 GCCGTCATCTGGTGC GCGGGGTCCCCT-CCTCCTTTCCGG GCG CCGG-GCGGAGGCAGAGGACGCCGC TTCCCTCCTCTCGCG Tfu_2594 3063610 - 3062714 - | membrane-bound lytic murein transglycosylase B TERM 1906 3063752 - 3063721 - R 86 -12.9 -3.90112 | opp_overlap 3063751, overlap 3063722 3063724 GGGTTCGGAATCAAA TGACGCCCCCGGG ACTCAG CTCGGGGGCGTCG CAGCAGAGGGGGTGC TERM 1907 3063751 - 3063722 - R 85 -16.4 -2.93853 | overlap 3063721 3063724 GGTTCGGAATCAAAT GACGCCCCCGGG ACTCAG CTCGGGGGCGTC GCAGCAGAGGGGGTG TERM 1908 3063749 - 3063724 - R 71 -13.2 -3.02166 | overlap 3063722 3063721 TTCGGAATCAAATGA CGCCCCCGGG ACTCAG CTCGGGGGCG TCGCAGCAGAGGGGG Tfu_2595 3064908 - 3063796 - | inositol-5-monophosphate dehydrogenase Tfu_2596 3066567 - 3065065 - | inosine-5'-monophosphate dehydrogenase Tfu_2597 3067317 - 3066679 - | RNA polymerase sigma factor SigD TERM 1909 3067024 - 3067007 - G 81 -2.6 -5.08255 | ATGCCGAAAACAAAA GAAGCG AAAGGG CGCCCC ATGTCCCGGTAGCGC TERM 1910 3067379 - 3067435 + r 100 -21.8 -2.73364 | gap 3, opp_overlap 3067390 TTTGGGACTATTCTC GCGGGAC---ACCACGCGTGTCCCGGG GGTAGA CCCGGGACACGCGTGGTAAAGGCCCGC TGCTTCCCGTGACGG TERM 1911 3067421 - 3067390 - R 100 -23.1 -2.62184 | opp_overlap 3067379 TCTCGCGGGACACCA CGCGTGTCCCGGG GGTAGA CCCGGGACACGCG TGGTAAAGGCCCGCT groEL 3069077 - 3067464 - | chaperonin GroEL TERM 1912 3069186 - 3069157 - R 100 -27.9 -3.70902 | opp_overlap 3069149 GCGGCCACACGGAAA GCGCGCGGGCGGG TGGT CCCGCCCGCGCGC AGTCACACCTTGCTC Tfu_2599 3069531 - 3069220 - | 10 kD chaperone Tfu_2600 3069725 - 3070996 + | hypothetical protein TERM 1913 3071428 - 3071418 - g 70 -3.2 -4.46212 | overlap 3071423 TCTCGGAGCAGAAAA CACA GGA TGCG ATCACCGAGGAGATG TERM 1914 3071993 - 3071964 - g 78 -12.1 -3.68529 | gap 1, overlap 3071942 3071988 AGCGCATCACCGAAA CCGCCGACGCCCTG CGC CAGGA-GACGGCGG AGCAGACAGCCGCGC Tfu_2601 3071306 - 3073432 + | hypothetical protein Tfu_2602 3074586 - 3073543 - | O-sialoglycoprotein endopeptidase Tfu_2603 3075041 - 3074583 - | SSU ribosomal protein S18P alanine acetyltransferase Tfu_2604 3075733 - 3075038 - | hypothetical protein Tfu_2605 3076242 - 3075745 - | hypothetical protein Tfu_2606 3077471 - 3076347 - | alanine racemase Tfu_2607 3079716 - 3077557 - | hypothetical protein TERM 1915 3079913 - 3079925 + r 80 -4.8 -4.72272 | CTCCTGCCGTGTGAT CGGA TCAGT TCCG TTTTTGGTGCGGGAG Tfu_2608 3081762 - 3080290 - | hypothetical protein Tfu_2609 3081970 - 3082461 + | hypothetical protein Tfu_2610 3083408 - 3082464 - | pantothenate kinase TERM 1916 3083373 - 3083388 + g 79 -4.6 -4.7373 | GTCGAGTTCCACGTA CGGCGT CAAA AAGCCG TTTTTCGTCGCGTGA TERM 1917 3084092 - 3084060 - g 70 -8.4 -3.95073 | gap 1 CTCCAGACGGAGAAA CG-GGCCGGCAAGCT GGCG AACCTGCGGGCCGCG CTGCAAGCCAATCCG Tfu_2611 3083904 - 3085772 + | D-fructose-6-phosphate amidotransferase TERM 1918 3085915 - 3085875 - T 100 -34.3 -2.87132 | opp_overlap 3085850 3085848, overlap 3085905 3085907 GCCTTGGCGCACACA CTGCTGCCCTGTTTCCCGC CGG GCGGGAAACAGGGCAGCAG CGCTTCCCAGCAGGC Tfu_2612 3087283 - 3085934 - | phosphoglucosamine mutase TERM 1919 3087082 - 3087027 - G 72 -6.6 -4.36914 | gap 1, overlap 3087028 3087051 TCGCCTGTCAGAAAA GCCACGGCAGGCGTGGGCAGCACACCG AGG CGG-ATGACGTCCACCCCGGCGCTGGC GAGTCCCGCTACTAC TERM 1920 3087436 - 3087380 - R 100 -22.6 -3.06418 | gap 1, opp_overlap 3087430 TGCCGATAGAAACGA CTATGGCCCGCACTGACCACTCGTTTT TGAG ACAACGAGTCATCAGTGCGGGCC-TAG GACCTGTTCCCCGTG rpsI 3088017 - 3087508 - | 30S ribosomal protein S9 rplM 3088500 - 3088051 - | 50S ribosomal protein L13 TERM 1921 3088752 - 3088722 - H 71 -7.4 -4.11394 | overlap 3088723 AGGCCACGGTCAAAA TCCCCATGGCTCTC GTG GCATGCCATGGGGC GACCAGGCTCGCGCA TERM 1922 3088761 - 3088777 + H 71 -12.3 -3.17941 | ATGGGGCGACCAGGC TCGCGCA CGA TGCGCGA TTACTCCACTCTCAT TERM 1923 3088976 - 3089019 + H 86 -9.7 -4.49353 | gap 3, opp_overlap 3088976 3088979 3088984, overlap 3088977 CACCGCCTTATCACA TGAGGATAGCGTGTGAGCGGGG AAA CCCCGC--AC-CGCTCTCCTCG TTTCTTCTGTTCTGC Tfu_2615 3088988 - 3091138 + | hypothetical protein TERM 1924 3091147 - 3091194 + T 81 -16.8 -2.62184 | opp_overlap 3091151 GCAGTAGGCCCTGCA ACCACCCTGCCGGGGGTGCCGC GGCC GTGGCACCCCCGGCGCCGCGGC TACTCTGCGGCCCGC TERM 1925 3091190 - 3091151 - T 75 -14.8 -2.71144 | opp_overlap 3091147 TAGGCCCTGCAACCA CCCTGCCGGGGGTGCCGC GGCC GTGGCACCCCCGGCGCCG CGGCTACTCTGCGGC truA 3092084 - 3091194 - | tRNA pseudouridine synthase A TERM 1926 3091715 - 3091698 - G 73 -7.7 -4.11371 | gap 1, overlap 3091688 GAACAGCGCGGAAAA CCGGGCGT CGA AC-CCCGG GGGTGCCGGGGCTAC TERM 1927 3092083 - 3092056 - G 100 -17 -3.96148 | TCCGTCCACGACAAA TGCCCGGCCCCC TGAC GGGAACCGGGCA TTCACACCATCACAC rplQ 3092635 - 3092117 - | 50S ribosomal protein L17 TERM 1928 3092595 - 3092617 + g 91 -14.8 -3.91911 | opp_overlap 3092554 AGCCGCTCGTGTGCC GGGCCTCCGC CCA GCCGAGGCCC TTTCGTTGGCGTAGG Tfu_2618 3093717 - 3092701 - | DNA-directed RNA polymerase subunit alpha Tfu_2619 3094268 - 3093864 - | 30S ribosomal protein S11 rpsM 3094713 - 3094333 - | 30S ribosomal protein S13 Tfu_2621 3095034 - 3094921 - | 50S ribosomal protein L36P Tfu_2622 3095318 - 3095097 - | translation initiation factor 1 Tfu_2623 3096003 - 3095578 - | hypothetical protein TERM 1929 3096067 - 3096122 + r 87 -18.7 -2.71731 | gap 3, opp_overlap 3096076 3096119 AGGAGCAAAGACCGC G-GCTGAAAATTCGTGTGGGCCGCCT GGGAAGG AGGCGGCCCACACGAATT--CAGCAC TGCTTCAGCACTGCG TERM 1930 3096114 - 3096076 - R 100 -24.8 -4.07885 | opp_overlap 3096067 GACCGCGGCTGAAAA TTCGTGTGGGCCGCCT GGGAAGG AGGCGGCCCACACGAA TTCAGCACTGCTTCA Tfu_2624 3096964 - 3096140 - | methionine aminopeptidase, type I TERM 1931 3096695 - 3096722 + g 77 -14.8 -3.23853 | overlap 3096693 GTCCGCAAGCACCTT GGTGGCCCGCGG AATC CCGTGGACCACC TCTTCATTGACGGAA Tfu_2625 3097533 - 3096964 - | adenylate kinase secY 3098862 - 3097534 - | preprotein translocase subunit SecY rplO 3099604 - 3099155 - | 50S ribosomal protein L15 Tfu_2628 3099786 - 3099601 - | 50S ribosomal protein L30P rpsE 3100392 - 3099790 - | 30S ribosomal protein S5 Tfu_2630 3100828 - 3100442 - | 50S ribosomal protein L18P Tfu_2631 3101367 - 3100831 - | 50S ribosomal protein L6P rpsH 3101783 - 3101385 - | 30S ribosomal protein S8 Tfu_2633 3102203 - 3102018 - | SSU ribosomal protein S14P rplE 3102789 - 3102214 - | 50S ribosomal protein L5 rplX 3103094 - 3102789 - | 50S ribosomal protein L24 rplN 3103466 - 3103098 - | 50S ribosomal protein L14 TERM 1932 3103261 - 3103245 - G 74 -13.7 -3.36803 | opp_overlap 3103244 3103245 GAAGCGGATGTAGAA GCCGTCG GGC CGACGGC GTTCCTTCGTGGTGC rpsQ 3103865 - 3103590 - | 30S ribosomal protein S17 Tfu_2638 3104119 - 3103862 - | 50S ribosomal protein L29P rplP 3104535 - 3104119 - | 50S ribosomal protein L16 rpsC 3105350 - 3104538 - | 30S ribosomal protein S3 Tfu_2641 3105727 - 3105350 - | 50S ribosomal protein L22P Tfu_2642 3106084 - 3105806 - | SSU ribosomal protein S19P rplB 3106930 - 3106097 - | 50S ribosomal protein L2 rplW 3107274 - 3106984 - | 50S ribosomal protein L23 rplD 3107939 - 3107271 - | 50S ribosomal protein L4 rplC 3108593 - 3107943 - | 50S ribosomal protein L3 rpsJ 3108916 - 3108608 - | 30S ribosomal protein S10 tuf 3110325 - 3109132 - | elongation factor Tu Tfu_2649 3112493 - 3110379 - | elongation factor G TERM 1933 3111513 - 3111560 + g 71 -9.9 -3.68341 | gap 1, overlap 3111545 GTAGGTGAGCTTACC GAGGTGCTGGTCGCTCATG-AT CTTGA ATGCGAGAGCGGCCAGCGGCTC TTCTTCGCTGGGCTT TERM 1934 3111662 - 3111693 + g 71 -10.8 -3.61715 | opp_overlap 3111678, overlap 3111665 3111666 ACGGCAGGTAGGCGA CGATGGCGTCCAGC AAGG GCTGCACGCCCTTG TTCTTGAACGCGCTA TERM 1935 3111665 - 3111690 + g 70 -8.9 -3.9461 | opp_overlap 3111678, overlap 3111662 3111666 GCAGGTAGGCGACGA TGGCGTCCAGC AAGG GCTGCACGCCC TTGTTCTTGAACGCG Tfu_2650 3113009 - 3112539 - | 30S ribosomal protein S7 rpsL 3113381 - 3113010 - | 30S ribosomal protein S12 TERM 1936 3113475 - 3113493 + r 75 -10.2 -3.86015 | CCCCCGACCCCCGCG CTCGGGCG TGT CGCCCCAG TTTCTAAGCACAGTG Tfu_2652 3116636 - 3113862 - | hypothetical protein TERM 1937 3116769 - 3116724 - R 78 -16.2 -2.73542 | gap 1, opp_overlap 3116724 3116728 GTCAACCGGTAACGA CGGACGGCGGTAGTGCTGCCC GTTGT GAGATGCACTACCGCCGT-CG TTCAGCTCAGCGAGA TERM 1938 3116728 - 3116766 + r 75 -15.2 -2.73364 | opp_overlap 3116724, overlap 3116724 ACCGGTAACGACGGA CGGCGGTAGTGCTGCCCG TTG TGAGATGCACTACCGCCG TCGTTCAGCTCAGCG Tfu_2653 3120679 - 3116804 - | DNA-directed RNA polymerase subunit beta' TERM 1939 3119514 - 3119528 + g 70 -12.8 -3.28712 | overlap 3119511 GGACCGGTGACGGGG CGGCCG CGG CGGCCG TTGTCGAACAGCGCG rpoB 3124178 - 3120711 - | DNA-directed RNA polymerase subunit beta TERM 1940 3124895 - 3124853 - R 100 -14.1 -4.4009 | gap 1, overlap 3124856 3124860 CCGCAGCCCAGAAAA CAACGA-AGGCGGCCGCCCC GCAA GGGGCAGCCGCCCGCCATAG CCGAAAAAGGCTTAC TERM 1941 3124891 - 3124856 - R 100 -16 -4.32067 | overlap 3124853 3124860 CAGCCCAGAAAACAA CGAAGGCGGCCGCCCC GCAA GGGGCAGCCGCCCGCC ATAGCCGAAAAAGGC TERM 1942 3124887 - 3124860 - R 100 -22 -3.72078 | overlap 3124856 3124853 CCAGAAAACAACGAA GGCGGCCGCCCC GCAA GGGGCAGCCGCC CGCCATAGCCGAAAA TERM 1943 3124949 - 3124904 - R 70 -2.4 -4.64766 | gap 1, opp_overlap 3124942 GCCATAGCCGAAAAA GGCTTACTTC-AGGGTCACGG TAGCG CCGGCACCCTCGAGGGCAGCC TTGGCCTTCTCCGCG rplL 3125299 - 3124907 - | 50S ribosomal protein L7/L12 rplJ 3125959 - 3125432 - | 50S ribosomal protein L10 TERM 1944 3126054 - 3126031 - R 81 -8 -4.56978 | TCGCGAAAGAATAAA GCCCCGGCAC AAGC GCAGCGGGGC CCAGGATCGCGGACG TERM 1945 3126398 - 3126369 - R 100 -20.1 -4.57474 | gap 1 GCAATTCACAGAAAA CGGGCGC-CTCGAC AGT GTCGAGTGCGCCCG TTACCACCTCTGCGC TERM 1946 3126444 - 3126419 - R 72 -11.1 -3.53091 | ACCTCTGCGCTGAAA CGTCAGGCAGC CTTC GCCGCCTCACG CGTGGCATTCGGGTC Tfu_2657 3127128 - 3126421 - | 50S ribosomal protein L1P TERM 1947 3127222 - 3127199 - R 100 -8 -5.28414 | opp_overlap 3127199, overlap 3127201 GAACAAAGAGAAAAA GACAGTCGCC GGAA GGCGCCTGAC TACTTGACTTCGATG TERM 1948 3127220 - 3127201 - R 81 -9.2 -4.23487 | opp_overlap 3127199, overlap 3127199 ACAAAGAGAAAAAGA CAGTCGCC GGAA GGCGCCTG ACTACTTGACTTCGA Tfu_2658 3127650 - 3127222 - | 50S ribosomal protein L11P Tfu_2659 3128622 - 3127870 - | transcription antitermination protein NusG Tfu_2660 3129000 - 3128755 - | protein translocase subunit secE/sec61 gamma Tfu_2661 3129365 - 3130573 + | aspartate aminotransferase TERM 1949 3130630 - 3130654 + F 95 -15 -4.17906 | GGCCGTACCAGCTGA GCCGTCCGTC CTCGA GGCGGACGGC TTCTTTCGTTTCATT Tfu_2662 3130708 - 3131736 + | adenosine deaminase Tfu_2663 3132386 - 3131772 - | hypothetical protein TERM 1950 3132598 - 3132615 + r 82 -4.1 -5.08824 | AGAGAATTCGAGAGG GCAATTC ATTG GAATGGC TTTTTTAAATCGGGC murB 3133976 - 3132906 - | UDP-N-acetylenolpyruvoylglucosamine reductase TERM 1951 3132975 - 3132959 - G 74 -15.1 -3.04144 | GCGTGATCCCGAATA CGCGGGC CAC GCCCGCG CGCACTTCACGCGCC Tfu_2665 3134476 - 3134051 - | hypothetical protein Tfu_2666 3134951 - 3134493 - | hypothetical protein TERM 1952 3135065 - 3135026 - R 100 -28.1 -3.08371 | GACAGGGCCAACACA CCGGTAGCCCAGTGAGC GGGCAG GCTCACTGGGCTACCGG GAAGTCCAGACCGCG rpmG 3135328 - 3135164 - | 50S ribosomal protein L33 TERM 1953 3135408 - 3135373 - R 86 -3 -5.1287 | gap 1 CGGACATTGAAAAAA CCCGCGTTCGTCCCCGG TTT CCGGGGGTCC-CGCAGG TAGTAGCGGAGGCCG Tfu_2668 3137982 - 3135895 - | hypothetical protein Tfu_2669 3142500 - 3138154 - | hypothetical protein Tfu_2670 3143854 - 3142646 - | hypothetical protein Tfu_2671 3144627 - 3143920 - | hypothetical protein TERM 1954 3144401 - 3144383 - G 82 -17.4 -3.01712 | TCTGCCGGGGCAAGA GCCCCGCC TCG GGCGGGGC GGACCGCTGACGTGT TERM 1955 3144848 - 3144797 - H 88 -17.5 -3.02043 | gap 2, opp_overlap 3144805, overlap 3144805 3144838 AACCGTGCCCGAAGA CGGCAAAAGCGGCCTTCTTCCAGGG TTGT CCCTGGT-GAAGACCGCTTCTG-CG ACCTGTGGCAGGTGT TERM 1956 3144841 - 3144805 - H 95 -15.2 -4.1964 | gap 1, opp_overlap 3144805, overlap 3144797 3144838 CCGAAGACGGCAAAA GCGGCCTTCTTCCAGGG TTGT CCCTGGT-GAAGACCGC TTCTGCGACCTGTGG TERM 1957 3144805 - 3144841 + H 77 -13 -3.30771 | gap 1, opp_overlap 3144797 3144805 3144838 CCGAAGACGGCAAAA GCGGCCTTCTTCCAGGG TTGT CCCTGGT-GAAGACCGC TTCTGCGACCTGTGG TERM 1958 3145646 - 3145625 - g 72 -3.7 -4.59773 | gap 1 CGCCATGCTGAAAAA CAGCGACC TGGATGT GG-CGCTG CAGTTCGTGAACTTC Tfu_2672 3145170 - 3145667 + | nucleotide-binding protein TERM 1959 3145734 - 3145748 + T 74 -11.4 -3.65314 | GGTGTAGTGCACCGG CTCGGG CAC CCCGAG TTATTCACAGTTCCA Tfu_2673 3146735 - 3145749 - | HtpX-2 peptidase Tfu_2674 3147160 - 3149013 + | 2-oxoglutarate ferredoxin oxidoreductase, alpha subunit Tfu_2675 3149003 - 3150061 + | 2-oxoglutarate ferredoxin oxidoreductase subunit beta TERM 1960 3150073 - 3150113 + F 100 -21.2 -3.53444 | overlap 3150063 GTAGTCGCGGTTTCC CGTGTGTGGGCGCGCATC CGTGC GGTGCGCGCCCACAGGCG TTTAGAGGGCCGTGC Tfu_2676 3150164 - 3150853 + | hypothetical protein Tfu_2677 3151014 - 3151517 + | hypothetical protein Tfu_2678 3152494 - 3151826 - | methionine sulfoxide reductase A Tfu_2679 3152569 - 3153507 + | RarD protein TERM 1961 3153544 - 3153517 - T 90 -15.6 -3.63805 | opp_overlap 3153532 AGTTGAGACGGGAAA GGCGGCTGCC TTTGAGGC GGCAGCCGCC CGTCCGCGGCGTCCC TERM 1962 3153548 - 3153582 + T 73 -14.3 -2.85437 | gap 1, overlap 3153532 3153545 GCGGCAGCCGCCCGT CCGCG-GCGTCCCCTT TCAC AGGGGGACGCTCACGG TCCTTCCTCTTCCTC Tfu_2680 3154323 - 3153577 - | hypothetical protein Tfu_2681 3155496 - 3154492 - | trans-hexaprenyltranstransferase Tfu_2682 3157283 - 3155634 - | NADH dehydrogenase subunit N TERM 1963 3155886 - 3155874 - G 73 -10.5 -3.8211 | overlap 3155844 GCGCACGTAGAAGAA CGCGG TCA CCGCG CTGCTGAGCACACCC Tfu_2683 3158845 - 3157280 - | NADH dehydrogenase subunit M Tfu_2684 3160842 - 3158896 - | NADH dehydrogenase subunit L Tfu_2685 3161151 - 3160861 - | NADH dehydrogenase subunit K Tfu_2686 3162008 - 3161148 - | NADH dehydrogenase subunit J TERM 1964 3161264 - 3161304 + g 72 -13.2 -3.15579 | gap 1 TCATGTCTTCAGGGA CCCCGTGCTGGTCCTCGGG GTTG CGCGCGG-CCAGCACCGGG TTGATCGAGAGTTCC TERM 1965 3161960 - 3161983 + g 73 -10.2 -3.90744 | gap 1, opp_overlap 3161949, overlap 3161960 3161969 AGAAGGTCGCGGTCT C-ACCGCCGCC AAT GGCGGCGGCCG TTGTTTGAAGCGGAA Tfu_2687 3162556 - 3162005 - | NADH dehydrogenase subunit I Tfu_2688 3163907 - 3162549 - | NADH dehydrogenase subunit H Tfu_2689 3166387 - 3163904 - | NADH dehydrogenase subunit G Tfu_2690 3167703 - 3166387 - | NADH-quinone oxidoreductase, F subunit Tfu_2691 3168419 - 3167700 - | NADH dehydrogenase subunit E Tfu_2692 3169720 - 3168416 - | NADH dehydrogenase subunit D TERM 1966 3169451 - 3169499 + g 75 -8.2 -4.21812 | gap 2, opp_overlap 3169466 CGGCGTGAGGTAGTC CATGCGAGTCACGAACGTGGTGCC TTG GGT-CCACGTCCGGTACTC-CATG TTCTTTTCGATACCG Tfu_2693 3170475 - 3169717 - | NADH dehydrogenase subunit C Tfu_2694 3171029 - 3170472 - | NADH dehydrogenase subunit B Tfu_2695 3171462 - 3171103 - | NADH dehydrogenase subunit A Tfu_2696 3172850 - 3171543 - | geranylgeranyl reductase, plantal and TERM 1967 3173236 - 3173213 - R 86 -6.6 -4.96848 | TGCGCCACAGAAAAA CCTCCTTGTC CGGG GACGCGGAGG TGAGCAGAGACACAC ubiE 3173972 - 3173262 - | ubiquinone/menaquinone biosynthesis methyltransferase Tfu_2698 3174363 - 3174022 - | hypothetical protein TERM 1968 3174417 - 3174397 - H 71 -3.9 -4.52589 | overlap 3174399 GCGGTTCACAGAAAA GTCCCGG TGAAGAC CCGGCAC GCCCCTGGGGCAGCG TERM 1969 3174506 - 3174520 + H 75 -3.4 -4.72272 | overlap 3174508 CGTCCCTCTCCACCC CAGCCT AAA GGGCGG TTTTTCCTGCGGACA TERM 1970 3174613 - 3174593 - H 71 -7.6 -4.10188 | GAGATTGAGAAAGAA GACATCCC TGAGG GGGATATC ACGTTACGATCACAT Tfu_2699 3174748 - 3174951 + | excisionase/Xis, DNA-binding Tfu_2700 3175050 - 3175397 + | hypothetical protein TERM 1971 3175417 - 3175446 + T 80 -14.9 -3.12351 | GCACGGCATGGTGAA GGCCCGCCCTGAG TGAG CCGAGGGCGGGCC TTCACTCTGCCGACG Tfu_2701 3176493 - 3175504 - | CcsB Tfu_2702 3178080 - 3176497 - | putative integral membrane protein TERM 1972 3177049 - 3177019 - G 79 -14.6 -3.37344 | CGCTGAGGGAAGGAA CACCCCGGTGAAGC CCA GCTGCTCCGGGGCG ATGTCGGGGACTTTC Tfu_2703 3178895 - 3178083 - | putative cytochrome C biogenesis membrane protein Tfu_2704 3179509 - 3178892 - | hypothetical protein TERM 1973 3179141 - 3179188 + g 74 -13.4 -3.33696 | GCGGTTGTCCTTGAT GTTGACGCCGAGGAAGCTCACC CCTT GGTCGGCGTGCTCGGCGTTGAC TTCGTTGAGGACGGG TERM 1974 3179654 - 3179622 - R 100 -29.3 -2.62184 | opp_overlap 3179622 GCCGCTCGGACACTA TGTGGGGGCGGCGCA GAC TGCGCCGCCCCCACA TAGTTCGCGTCTCAG TERM 1975 3179622 - 3179654 + r 100 -29.3 -2.74563 | opp_overlap 3179622 GCCGCTCGGACACTA TGTGGGGGCGGCGCA GAC TGCGCCGCCCCCACA TAGTTCGCGTCTCAG Tfu_2705 3179899 - 3179666 - | excisionase/Xis, DNA-binding Tfu_2706 3180966 - 3180169 - | hypothetical protein Tfu_2707 3182303 - 3181125 - | putative acetoin utilization protein Tfu_2708 3183190 - 3182396 - | pyrroline-5-carboxylate reductase Tfu_2709 3184361 - 3183444 - | hypothetical protein TERM 1976 3184838 - 3184821 - g 78 -14.1 -3.57144 | opp_overlap 3184819 CCGGCGAGGCGGAAA GCCGCGG CTGT CCGCGGC ACTGCTGTCCCCGGG Tfu_2710 3184584 - 3185021 + | hypothetical protein Tfu_2711 3185153 - 3186517 + | DNA repair protein RadA TERM 1977 3186774 - 3186786 + F 81 -9.1 -4.25104 | TCCTTCCATTCGGGA GCGCA CCC TGCGC TTTTCGTCCCCCCAC Tfu_2712 3186841 - 3188700 + | cellulase TERM 1978 3188761 - 3188724 - T 93 -17.1 -3.84825 | gap 1, opp_overlap 3188730, overlap 3188730 TGTACCGAGAGGAAA CACG-AAGGACCGTGCCG CTG CGGCACGGTCCTTTCTCG TTGCCCGCCTAGAGC TERM 1979 3188730 - 3188754 + T 100 -21.5 -4.05446 | opp_overlap 3188724 3188730 GAGAGGAAACACGAA GGACCGTGCCG CTG CGGCACGGTCC TTTCTCGTTGCCCGC TERM 1980 3188754 - 3188730 - T 100 -21.5 -3.4934 | opp_overlap 3188730, overlap 3188724 GAGAGGAAACACGAA GGACCGTGCCG CTG CGGCACGGTCC TTTCTCGTTGCCCGC Tfu_2713 3189480 - 3188770 - | hypothetical protein TERM 1981 3188977 - 3189022 + g 83 -12.4 -4.07885 | overlap 3188968 3188980 CCCACGCACCGTGGT CGACAGGGGCCGGGCCGCGG GCCCGA TCGCGGTGCGGCCCTGGTGG TTTTCGAAGCCGGTG Tfu_2714 3190748 - 3189492 - | putative ligase TERM 1982 3190529 - 3190555 + g 77 -3.6 -4.7629 | overlap 3190532 CGATCTCGCGCAGCG CTGCAGCGATCA GTC TGGTCGTGGTGG TTTTTCCGTTGGTGG Tfu_2715 3192908 - 3190974 - | hypothetical protein TERM 1983 3191919 - 3191942 + g 76 -2.2 -4.70626 | overlap 3191930 3191936 GACTGCCACGTCAGG CTCGTCGGCG AACG CGGCGCGGAG TTTTTCGCGTTCTTC TERM 1984 3192880 - 3192868 - G 75 -6.2 -4.4715 | opp_overlap 3192867 3192868, overlap 3192863 CGCCAACCGAGAAAA GGCC TGCCC GGCC GTTTCCGCTCCGCTC Tfu_2716 3194120 - 3193086 - | alanine-rich protein Tfu_2717 3194547 - 3194263 - | hypothetical protein TERM 1985 3194538 - 3194493 - G 100 -29.9 -3.79113 | gap 1 ACTGCCGCAGAAGAA CGT-CACCGGTGGCGGCAGGGG ACC CGCCTGCCGCCACCGGTGGACG AAAGGTCAACGAGAA Tfu_2718 3194864 - 3194562 - | hypothetical protein Tfu_2719 3195700 - 3194861 - | thiosulfate sulfurtransferase TERM 1986 3196124 - 3196088 - R 77 -12.2 -3.63627 | overlap 3196089 3196092 GTTTCACAGGGGAAA CGCAGCAGGGCCGCCC TGCGT GAGCGGCCCTGACACA GACGTTGCTGCGGGC TERM 1987 3196120 - 3196092 - R 71 -13.8 -2.6583 | overlap 3196089 3196088 CACAGGGGAAACGCA GCAGGGCCGCCC TGCGT GAGCGGCCCTGA CACAGACGTTGCTGC Tfu_2720 3196828 - 3196139 - | hypothetical protein Tfu_2721 3198261 - 3197014 - | hypothetical protein Tfu_2722 3198367 - 3199284 + | HAD family hydrolase Tfu_2723 3200333 - 3199326 - | putative epimerase TERM 1988 3199902 - 3199929 + g 77 -14.8 -3.23711 | gap 1, overlap 3199895 GGCCTCGTGGAGGCG GGCCCGTGC-CGC CTT GCGTGCCCGGGCC TTCGTCGCTTCTGGA TERM 1989 3200033 - 3200003 - G 76 -13.2 -3.44319 | opp_overlap 3200022, overlap 3200004 TCGAACGCACCACAA GCCTGCGCACGGTC GTA GACCGCTGGCAGGC CGCCAGCAGTTGCAT Tfu_2724 3200554 - 3200456 - | hypothetical protein Tfu_2725 3201396 - 3200761 - | putative phosphoglycerate mutase TERM 1990 3201606 - 3201566 - R 100 -20.5 -3.70902 | gap 1, opp_overlap 3201571 TCCGGCACAGGGAAA CAGCACCCC-CGGTCCCG GAGTGG CGGGGCCGAGGGGTGCTG TCGGTGTGGCGTGCC TERM 1991 3201571 - 3201601 + r 71 -14 -2.65815 | gap 1, opp_overlap 3201566 CACAGGGAAACAGCA CCCC-CGGTCCCG GAGTGG CGGGGCCGAGGGG TGCTGTCGGTGTGGC Tfu_2726 3202915 - 3201623 - | glutamate-1-semialdehyde aminotransferase Tfu_2727 3203627 - 3204118 + | ribonuclease activity regulator protein RraA TERM 1992 3204175 - 3204150 - f 85 -16.9 -3.05384 | GTGCCGGTGAGGGAA CCGGTGACCAC CACG GTGGCCACCGG TGGGAGACATCCGTC TERM 1993 3207494 - 3207480 - g 72 -4.2 -4.66609 | overlap 3207482 GACCTCATCGAAAAA CGCC GCGACCT GGCG CTCGTGGAAAGCCCC Tfu_2728 3204666 - 3208292 + | putative DNA methylase Tfu_2729 3209021 - 3208359 - | hypothetical protein Tfu_2730 3210140 - 3209157 - | delta-aminolevulinic acid dehydratase Tfu_2731 3211854 - 3210163 - | uroporphyrinogen-III C-methyltransferase / uroporphyrinogen-III synthase hemC 3212867 - 3211905 - | porphobilinogen deaminase hemA 3214302 - 3212869 - | glutamyl-tRNA reductase Tfu_2734 3215080 - 3214388 - | redox-sensing transcriptional repressor Rex Tfu_2735 3215533 - 3215246 - | putative redoxin TERM 1994 3215489 - 3215502 + g 71 -2.4 -4.66318 | overlap 3215448 CAGCATGGTGACCAC GTGA GGATTG TCAC TTTTCTTGGCATGGT Tfu_2736 3215889 - 3215581 - | putative molybdopterin converting factor TERM 1995 3215693 - 3215683 - G 76 -2.4 -4.72272 | overlap 3215690 GGCGTTCACCAAAAA CGAG GAA CGCG CTAAAACAGCGAGCA Tfu_2737 3215948 - 3216709 + | transcriptional regulatory protein TERM 1996 3216834 - 3216863 + F 74 -10.1 -3.71792 | gap 1 ACGCGCCAGTTTTCA CGCTA-CTGACCGT TTC ACGGTGAGGTAGCG TTCCTTTTCCCTTGC Tfu_2738 3216945 - 3217988 + | hypothetical protein Tfu_2739 3218043 - 3219014 + | putative acetyltransferase TERM 1997 3219523 - 3219472 - g 78 -6.4 -4.63932 | gap 1 CAGCTCCCAAGAAAA GGCGATGGCGGCGTGGGTCGCTG CGTACAC CAGCG-CCTGCGCGGACACCACC GTCAACTACGACTCG Tfu_2740 3219290 - 3220408 + | periplasmic phosphate binding protein TERM 1998 3220425 - 3220476 + F 100 -23.9 -3.4072 | CCGCACTGGTCCTGT CGCTGTC-AGGGCAGGGCACCACAG ACCG CTGTGG-GCCCTGCCCTTGGCTGCG TTGTCCTCCCCACTC Tfu_2741 3220743 - 3221705 + | phosphate ABC transporter, permease protein PstC Tfu_2742 3221706 - 3222791 + | phosphate ABC transporter permease Tfu_2743 3222848 - 3223627 + | phosphate ABC transporter permease TERM 1999 3223628 - 3223686 + T 85 -16.7 -2.98823 | gap 1, overlap 3223630 GGACGCTTCGGCTAG TCCACTC-CACGGCTGTGGCCCGCCCAA GCGC TTGGGCGGGCCACAGCCGTATGCGTACC TGTGTCTCCGCCGCG Tfu_2744 3224699 - 3223704 - | phosphate transport protein Tfu_2745 3225361 - 3224744 - | hypothetical protein Tfu_2746 3225798 - 3226307 + | hypothetical protein TERM 2000 3227676 - 3227664 - g 71 -10.5 -3.81447 | opp_overlap 3227661 CAGAGTCGAGAAGAA CCGGC TGT GCCGG GCCTGCTTCGACGGC Tfu_2747 3226318 - 3227772 + | amidophosphoribosyltransferase Tfu_2748 3227850 - 3228902 + | phosphoribosylaminoimidazole synthetase TERM 2001 3228949 - 3228906 - T 80 -15.5 -2.87344 | opp_overlap 3228912 3228913 3228948, overlap 3228913 TACCGTTCGTAGACA TGCGAAA-CCGGGGCTTCTCA ACGG TGAGA-GCCCCGGGTTTCGCC GCTGTCTAGATGTCT TERM 2002 3228912 - 3228942 + T 77 -11.9 -3.57119 | gap 1, opp_overlap 3228906 3228913, overlap 3228913 TCGTAGACATGCGAA ACCGGGGCTTCTCA ACGG TGAGA-GCCCCGGG TTTCGCCGCTGTCTA TERM 2003 3228913 - 3228941 + T 78 -15.4 -2.7395 | gap 1, opp_overlap 3228906 3228913, overlap 3228912 CGTAGACATGCGAAA CCGGGGCTTCTCA ACGG TGAGA-GCCCCGG GTTTCGCCGCTGTCT TERM 2004 3228941 - 3228913 - T 90 -15.4 -3.65425 | gap 1, opp_overlap 3228913 3228912, overlap 3228906 CGTAGACATGCGAAA CCGGGGCTTCTCA ACGG TGAGA-GCCCCGG GTTTCGCCGCTGTCT Tfu_2749 3229310 - 3229071 - | hypothetical protein Tfu_2750 3229623 - 3230666 + | hypothetical protein Tfu_2751 3231362 - 3231565 + | excisionase/Xis, DNA-binding TERM 2005 3231672 - 3231634 - T 91 -16.7 -3.62535 | gap 1, opp_overlap 3231625, overlap 3231635 CGAAAGAGTAGAGAA TCTCGAGGGGCGGGCCGC TATG GCGGTCCGCCCCTC-AGC ATGGCGCGGCGTCTC TERM 2006 3231671 - 3231635 - T 93 -20.2 -2.76798 | gap 1, opp_overlap 3231625, overlap 3231634 GAAAGAGTAGAGAAT CTCGAGGGGCGGGCCGC TATG GCGGTCCGCCCCTC-AG CATGGCGCGGCGTCT Tfu_2752 3232260 - 3231703 - | hypothetical protein Tfu_2753 3232405 - 3233169 + | cell wall hydrolase/autolysin TERM 2007 3233231 - 3233245 + F 70 -11.4 -3.36096 | overlap 3233227 TTCCCCACAGGGTGC CCCGGA CAC TCCGGG TTCGCTTTGTATGGT Tfu_2754 3233284 - 3233928 + | hypothetical protein Tfu_2755 3234541 - 3233939 - | TetR family transcriptional regulator Tfu_2756 3234813 - 3235064 + | hypothetical protein Tfu_2757 3235710 - 3235069 - | hypothetical protein Tfu_2758 3235770 - 3236261 + | putative mut-like protein Tfu_2759 3236953 - 3236321 - | glutathione peroxidase Tfu_2760 3236994 - 3238406 + | hypothetical protein Tfu_2761 3238469 - 3240361 + | methylmalonyl-CoA mutase Tfu_2762 3240358 - 3242580 + | methylmalonyl-CoA mutase TERM 2008 3242594 - 3242629 + F 100 -20.4 -3.15999 | overlap 3242596 GAGTGGTCCCACCCA GGCGCGGGGATCCCGG ACTG CCGGGGTCCCCGCGTG TTCCATCTGTCCCGG TERM 2009 3242596 - 3242627 + F 100 -25.2 -3.14125 | overlap 3242594 GTGGTCCCACCCAGG CGCGGGGATCCCGG ACTG CCGGGGTCCCCGCG TGTTCCATCTGTCCC Tfu_2763 3242679 - 3243677 + | arginine/ornithine transport system ATPase Tfu_2764 3243984 - 3244352 + | anti-sigma factor antagonist TERM 2010 3244359 - 3244383 + T 78 -13.5 -3.51924 | GCCGGCTGAGTCTGC GCACGGTTCCG GTA CGGCGCCGTGC TTCTGTGGGTCCGGC TERM 2011 3244388 - 3244418 + T 93 -18.3 -3.47345 | CGGCGCCGTGCTTCT GTGGGTCCGGCCG TATTC CGACCGGACCCAC TTCTGGTGTGCGGTT Tfu_2765 3246269 - 3244572 - | phosphoenolpyruvate--protein phosphotransferase Tfu_2766 3246551 - 3247114 + | hypothetical protein Tfu_2767 3248302 - 3247145 - | putative carbohydrate kinase TERM 2012 3249403 - 3249389 - g 70 -12.8 -3.30771 | CTACATGGCCGACAA CCGGCG CGC CGCCGG AGGAGTGGAACGCGA Tfu_2768 3248439 - 3249821 + | 6-phospho-beta-glucosidase TERM 2013 3249825 - 3249859 + T 100 -21.6 -3.01924 | opp_overlap 3249825 CCCGGAGACTAGAAA GTCCTGCCCCGATG CCGTCCC CATCGGGGCAGGAC TGTTCCGCAGCCGTG TERM 2014 3249859 - 3249825 - T 100 -21.6 -4.0162 | opp_overlap 3249825 CCCGGAGACTAGAAA GTCCTGCCCCGATG CCGTCCC CATCGGGGCAGGAC TGTTCCGCAGCCGTG Tfu_2769 3250349 - 3250002 - | hypothetical protein Tfu_2770 3250467 - 3250844 + | thioredoxin TERM 2015 3250892 - 3250871 - f 88 -17.3 -3.09193 | AGCAGAGGCATGCAA GGCCCACCG GTTC CGGTGGGCC TTACGCCTGCACCGG Tfu_2771 3251047 - 3252093 + | putative dehydrogenase TERM 2016 3252099 - 3252144 + T 72 -3.6 -4.63218 | gap 2, opp_overlap 3252097, overlap 3252099 3252100 GAGGTCGTGACAATC G-T-TTTGGGGTGGATAC CCTCCTGGAAAA GTATCCACCCCAAAGATC TTTTATTACGCAAAA Tfu_2772 3253230 - 3252418 - | hypothetical protein TERM 2017 3252666 - 3252685 + g 100 -5 -5.65927 | opp_overlap 3252666, overlap 3252667 ACCTCGTTGAGATCA TTTCCAAC GCGA GTTGGAAC TTTTTTCTTTGCATA TERM 2018 3252667 - 3252684 + g 72 -8.5 -3.9793 | opp_overlap 3252666, overlap 3252666 CCTCGTTGAGATCAT TTCCAAC GCGA GTTGGAA CTTTTTTCTTTGCAT Tfu_2773 3253333 - 3254298 + | hypothetical protein Tfu_2774 3254628 - 3255539 + | hypothetical protein Tfu_2775 3256053 - 3255574 - | hypothetical protein TERM 2019 3256158 - 3256136 - R 100 -13.6 -4.41237 | ACCAAAGAAGAGAAA GTTTTCCACA TGA TGTGGAAAAC TCTAGCAGTCGAACC Tfu_2776 3256776 - 3256363 - | hypothetical protein Tfu_2777 3256937 - 3257245 + | hypothetical protein Tfu_2778 3257242 - 3258447 + | helix-hairpin-helix DNA-binding motif-containing protein TERM 2020 3259024 - 3259048 + T 93 -19.3 -3.09516 | opp_overlap 3259011 3259024 CAGAGGACAAGAAAA GGCCCTCCCTG GAC CGGGGAGGGCC TTCCGTACTGCGAGC TERM 2021 3259048 - 3259024 - T 100 -17.1 -4.82819 | opp_overlap 3259024, overlap 3259011 CAGAGGACAAGAAAA GGCCCTCCCTG GAC CGGGGAGGGCC TTCCGTACTGCGAGC Tfu_2779 3260721 - 3259198 - | hypothetical protein TERM 2022 3259320 - 3259277 - G 72 -4.5 -4.42788 | gap 2, overlap 3259315 3259317 GCGAAGTCCAGAAAA CGCG-CTCCATCATCC-AGGG TACT CGCTAGGCCGAAGGAGACGCG GATCGCTCCGGCCGT Tfu_2780 3262341 - 3260839 - | tripeptidyl-peptidase B Tfu_2781 3263119 - 3262313 - | hypothetical protein Tfu_2782 3264343 - 3263171 - | DNA polymerase III subunit delta' Tfu_2783 3266477 - 3264417 - | thymidylate kinase TERM 2023 3264643 - 3264668 + g 71 -11.1 -3.61517 | gap 1, overlap 3264634 TCGAGCCGGTCGGCG GGACGGTCGGCG TGC CGCCG-CAGTCC TTCTTCGGCGGGAAT TERM 2024 3266587 - 3266576 - R 70 -5.8 -4.30576 | GCCTCAGGATGAAAA GGAC GTTC GTCC TGATCAGGAAGGGGA TERM 2025 3266623 - 3266598 - R 89 -16.9 -3.21099 | CGTCCTGATCAGGAA GGGGAGGACCC GGGA AGGTCCTCCCC CTGGAATGCCTGTCA Tfu_2784 3269356 - 3266636 - | DNA topoisomerase I TERM 2026 3266884 - 3266909 + g 74 -12.5 -3.65046 | gap 1, overlap 3266857 3266908 CGAGTTCCCGCAGCG GCGGCGC-CGCG GCC CGGGTGCGCCGC TTCTTCGGCTGGGCG TERM 2027 3268162 - 3268196 + g 81 -4 -4.82855 | overlap 3268160 TGCGGAAAGTGTCGC CGGCCGGGCGGATCGC CTC GTGGGCTTCCTGGGCG TTTTTGACTTTGCTG TERM 2028 3269276 - 3269290 + g 72 -5.6 -4.49556 | CGCCTTGGCGGGCGA CTCGAC GAT GACGAG TTTGTTTCCTCCGCC Tfu_2785 3269583 - 3269768 + | hypothetical protein TERM 2029 3269874 - 3269825 - T 74 -10 -3.72695 | gap 1, overlap 3269826 ACGGCGCGGAGGAAA TGCCCTCGTC-GCAGGACAGACT GGAGA AGTCTGGCCTGCAGACCACGGCG CGGGTGCGGGGTCTC Tfu_2786 3270628 - 3269912 - | hypothetical protein TERM 2030 3270970 - 3270954 - R 75 -13.7 -3.03243 | AGCCACCGCGGAACA GGGTGGC ACC GCCACCC CGCAGCGGGGCAGCG TERM 2031 3270975 - 3271020 + r 84 -13.9 -3.61178 | gap 1, overlap 3270979 CACCGCCACCCCGCA GCG-GGGCAGCGGTAGTCGTGG GGG CCACGGCCAGCGCAGCCTTCGC TTTCCACTCGGTGGG TERM 2032 3270979 - 3271015 + r 78 -14.3 -3.28497 | overlap 3270975 GCCACCCCGCAGCGG GGCAGCGGTAGTCGTGG GGG CCACGGCCAGCGCAGCC TTCGCTTTCCACTCG Tfu_2787 3272662 - 3271361 - | hypothetical protein TERM 2033 3272041 - 3272074 + g 79 -2.2 -4.89393 | overlap 3272042 ACCCGTGCCCTGCCG TGCCCCGCGCGG TCAGCCGCAT CCACGCGAGGCC TTTTTCTGCGGTTTC TERM 2034 3272980 - 3273022 + r 93 -18.7 -3.48924 | gap 1, opp_overlap 3272987, overlap 3272987 GACACGGACCTGAAT CGACAAAGTCCTGGTTGCTG GCAG CAGCGGCCAGGACTTT-TCG TTGTGTGGGCAGTCA TERM 2035 3272987 - 3273016 + r 100 -16.5 -4.53034 | opp_overlap 3272987, overlap 3272980 ACCTGAATCGACAAA GTCCTGGTTGCTG GCAG CAGCGGCCAGGAC TTTTCGTTGTGTGGG TERM 2036 3273016 - 3272987 - R 84 -12.1 -3.97636 | opp_overlap 3272987 3272980 ACCTGAATCGACAAA GTCCTGGTTGCTG GCAG CAGCGGCCAGGAC TTTTCGTTGTGTGGG TERM 2037 3273472 - 3273417 - R 100 -23.4 -3.89346 | opp_overlap 3273423, overlap 3273423 CCTGCAGGCCAGAAA CGAACAGCCGCACTCGTGCGCTGT GTGGGGGT ACAGCGCACGGGTGCGGCTTTGCG GTATGGGTGGTGGGG TERM 2038 3273466 - 3273423 - R 100 -24 -3.37915 | opp_overlap 3273423, overlap 3273417 GGCCAGAAACGAACA GCCGCACTCGTGCGCTGT GTGGGGGT ACAGCGCACGGGTGCGGC TTTGCGGTATGGGTG TERM 2039 3273423 - 3273466 + r 100 -27.6 -3.64103 | opp_overlap 3273423 3273417 GGCCAGAAACGAACA GCCGCACTCGTGCGCTGTGT GGGG GTACAGCGCACGGGTGCGGC TTTGCGGTATGGGTG TERM 2040 3273482 - 3273508 + r 87 -17.2 -2.91274 | TTTGCGGTATGGGTG GTGGGGCCGCCC TTG GGGCGGCCCCGG TGTGGTTCACCTCAA Tfu_2788 3274630 - 3273536 - | cellulose-binding family II protein TERM 2041 3274059 - 3274042 - G 72 -6.3 -4.25104 | gap 1, opp_overlap 3274051 CGTCGTGGAGCAAAA TCACCGCC CCC GG-GGTGA CCCGCTCGTTGAGCC Tfu_2789 3275568 - 3274834 - | xylanase/chitin deacetylase Tfu_2790 3276725 - 3275679 - | LacI family transcription regulator TERM 2042 3276539 - 3276591 + g 82 -11.2 -4.21275 | gap 2, overlap 3276540 TCCGCTCGCCGCGGC GCTG-TCCGTCGCCGCGGCT-CCCCC TGC GGCGGTATCCGCGGAGGCGGAGCAGG TTTTCGATGCGTTCG TERM 2043 3276540 - 3276590 + g 77 -14.7 -3.12283 | gap 2, overlap 3276539 CCGCTCGCCGCGGCG CTG-TCCGTCGCCGCGGCT-CCCCC TGC GGCGGTATCCGCGGAGGCGGAGCAG GTTTTCGATGCGTTC Tfu_2791 3276895 - 3278094 + | xylanase TERM 2044 3278159 - 3278199 + F 80 -16.2 -2.88544 | gap 2 CCTGGGCGTAGCGCT TGACG--GCGGGGAGCCGGG ACT CCCGGTTCCCCGCCACGGCA TGTCTGCCCCTGGCG TERM 2045 3278203 - 3278228 + F 100 -20.5 -4.85599 | CCCGCCACGGCATGT CTGCCCCTGGC GTGT GCCAGGGGCAG TTTTTCTGCGCTGCA TERM 2046 3278392 - 3278440 + F 84 -7.2 -4.77036 | gap 1, overlap 3278392 CGCAGGCGGTCTCGC GGGG-TCTCTCCTCGGCGTCCCG CCAG CGGGATTCTGCGGTGCGGTCCCC TTTTTCCTGGTGGGG TERM 2047 3278473 - 3278486 + F 100 -6.7 -5.24449 | GAGGATCCTGGACTC CGGTA TGCA TACCG TTTTTTCGATTTCTG TERM 2048 3278647 - 3278631 - f 93 -4.3 -5.44119 | overlap 3278633 CGGACGTCAAAAAAA TACGCGA GTA CCGCGGA TCGCCACCGCCACCT TERM 2049 3278645 - 3278633 - f 75 -6.9 -4.36089 | overlap 3278631 GACGTCAAAAAAATA CGCGA GTA CCGCG GATCGCCACCGCCAC TERM 2050 3278705 - 3278689 - f 70 -7.9 -4.0371 | GATTCCGCACAGAAA CCGCGCC AGC GGCACAG TCGCATAACCGCTGC TERM 2051 3279298 - 3279280 - g 72 -8.8 -4.05446 | CCTCGGAAGGAGAAA TCCGGCTC GCC GAGCTGGA CGCCGACAGCCGCTC Tfu_2792 3278931 - 3280088 + | hypothetical protein TERM 2052 3280111 - 3280140 + F 100 -15.7 -4.20367 | gap 1 GCCCAGCAGTCGTGA CGGCCC-CGCCGGT CCC GCCGGTGAGGGCCG TTGTTTCTTCCGCAA TERM 2053 3280644 - 3280590 - g 78 -13.6 -3.5393 | gap 3 ACTACCTCGCGGAAA CAGCGGCCG-A-CCAC-GCCGCCGCCG CGAT CGACGCCGGCCGCAGCTACGGCCGCCG CATGGTGCATGCACC Tfu_2793 3280274 - 3280948 + | transcriptional regulator TERM 2054 3282198 - 3282254 + G 76 -7.9 -4.37092 | gap 3, overlap 3282199 GGGTGCCTACCTGGT GCGCCGT-GGCGA-CGCCGGGGGCGCGC AAGC GCTCGACCT-GGCGGTCGCCCAAGGCGG TTTTGTCGAAACAGT Tfu_2794 3280945 - 3282360 + | hypothetical protein Tfu_2795 3282365 - 3282805 + | hypothetical protein Tfu_2796 3284020 - 3282827 - | protein phosphatase 2C-like TERM 2055 3282981 - 3282997 + g 70 -9.3 -3.9122 | TCCGCGGGCACGTTC CGCCACC CGC GGAGGCG TTCTTTCAAGGGGTA TERM 2056 3284229 - 3284185 - R 100 -25.1 -5.52986 | gap 1 ACGCGAGTAAAAAAA GGGGCCCGCCTCGGGTTCCG CGGTGC CGGAACCGG-GGCGGGCCCC TCCTCCCTCCCCACC Tfu_2797 3285530 - 3284271 - | d-amino-acid dehydrogenase TERM 2057 3284852 - 3284870 + g 71 -11.6 -3.53761 | TGACGGTGAACCCTT CGCGGAGG GTG CCGCCGCG TTTCACCACGGCTTC TERM 2058 3285021 - 3285077 + g 91 -12.7 -4.56597 | opp_overlap 3285013, overlap 3285023 3285023 GGCGAAACCGATCTC CTGGCCGGAGTCGCGGATCAGCCGCAG CTC CCGCAGCAGGTCCGCGGCTTGGGCGCG TTTTTCGAAGGCCGC TERM 2059 3285023 - 3285076 + g 74 -13.7 -3.33744 | gap 1, opp_overlap 3285013, overlap 3285023 3285021 CGAAACCGATCTCCT G-GCCGGAGTCGCGGATCAGCCGCAG CTC CCGCAGCAGGTCCGCGGCTTGGGCGC GTTTTTCGAAGGCCG Tfu_2798 3287219 - 3285627 - | putative DNA-binding protein TERM 2060 3285663 - 3285652 - G 76 -2.2 -4.77165 | gap 1, opp_overlap 3285653, overlap 3285653 TCGCGGAGAACAAAA GGACC GTC GG-CC TCTACTGCGAGAGCG TERM 2061 3287432 - 3287458 + r 70 -2.2 -4.63218 | overlap 3287434 CCACCTCTCCCCTAC CACGGGGATG GGGTCAG TATCCTCGGG TTTTCTTCCGGGGCG TERM 2062 3287466 - 3287493 + r 70 -11.2 -3.35798 | overlap 3287463 TCCTCGGGTTTTCTT CCGGGGCGGGGA GGTT TCCCGGTTCCGG TTCTGGATCGGCAAT Tfu_2799 3288172 - 3287519 - | TetR family transcriptional regulator TERM 2063 3288332 - 3288380 + H 90 -10.9 -4.37886 | gap 1, opp_overlap 3288327 CGGGACAGGAGTCGG CTGG-CCCACGTTGCAGCGTGC TCGACT GCCCGCTGCGGTGAGGGGCCGG TTTTCTCCCCGATCC Tfu_2800 3288673 - 3289149 + | hypothetical protein gldA 3289262 - 3290449 + | glycerol dehydrogenase TERM 2064 3290461 - 3290508 + T 95 -15.6 -4.07687 | gap 2, opp_overlap 3290458 3290459, overlap 3290462 GTAGGTGGGAAAGGG TCGGGGCAGGAGGGCCGTGCCG CAGGGA CGGC-TG-CCCTCCCGCCCCGG TTTTGCGGGGGAACT TERM 2065 3290462 - 3290507 + T 85 -16.9 -3.04398 | gap 2, opp_overlap 3290458 3290459, overlap 3290461 TAGGTGGGAAAGGGT CGGGGCAGGAGGGCCGTGCCG CAGGGA CGGC-TG-CCCTCCCGCCCCG GTTTTGCGGGGGAAC Tfu_2802 3291751 - 3290522 - | putative cytochrome P450 TERM 2066 3291422 - 3291448 + g 73 -7.2 -4.1891 | GCGGCGGGGGGTGAA CGCCTGGGCG GTCAGGG TGCGCAGGCG TTTGTGTTCAGCGCC Tfu_2803 3292995 - 3291751 - | putative cytochrome P450-family protein TERM 2067 3291822 - 3291784 - G 71 -10.8 -3.55622 | overlap 3291786 GGGAACGGGGGTAAA GACCACTGGAAGCGCGAC GAG GCCGCGCATCCAGGGGGA GGGACGCCAGCGCAG TERM 2068 3291820 - 3291786 - G 87 -17.8 -3.35522 | overlap 3291784 GAACGGGGGTAAAGA CCACTGGAAGCGCGAC GAG GCCGCGCATCCAGGGG GAGGGACGCCAGCGC Tfu_2804 3293558 - 3292992 - | putative ATP/GTP-binding protein Tfu_2805 3293922 - 3293566 - | hypothetical protein Tfu_2806 3294332 - 3293919 - | hypothetical protein Tfu_2807 3295729 - 3294332 - | ATP-binding region, ATPase-like TERM 2069 3294618 - 3294642 + g 73 -7.8 -4.11394 | gap 1 GCGGCTGGCGGTGCA CTG-GCCGCGG AGGG CTGCGGCGCGG TTTTGAGGATGCGCT TERM 2070 3296393 - 3296371 - R 100 -18.4 -4.67904 | overlap 3296353 CAGGAACCGCAAAAA GGCCGGAGCC TGC GGCCCCGGCC TCACCTCGGACTATT Tfu_2808 3298152 - 3296407 - | putative acetyl-coenzyme A synthetase TERM 2071 3298935 - 3298968 + G 76 -13.7 -3.48276 | TGTCCCGTCAGCGGA CCGGTCCCCTGCCCC AGCC GTGGCAGCGGTCCGG TTGTCTCCGCGGGAA Tfu_2809 3298297 - 3299157 + | regulatory protein, LuxR Tfu_2810 3299964 - 3299212 - | hypothetical protein Tfu_2811 3303364 - 3300122 - | methylmalonyl-CoA mutase, N-terminal TERM 2072 3301945 - 3301968 + g 86 -12.4 -4.15788 | gap 1 CGCTGGTGTCGTGTC CCG-CCGCGGC GAG GTCGCGGGCGG TTTCTTCGAGCCGTT TERM 2073 3302361 - 3302373 + g 82 -3.4 -5.03314 | ACCACGTCGGCGAAG TCGA GCATG TCGA TTTTTTCGAGCTGGG TERM 2074 3303395 - 3303428 + r 70 -2.3 -4.70659 | opp_overlap 3303392 3303395 3303415 GCGAGAAGCGAATTA GTAGGACTACCAACT AAAT AGTAGGTCATCCAAC TTTTTCCGTCTCAAG Tfu_2812 3304703 - 3303507 - | hypothetical protein TERM 2075 3305214 - 3305195 - g 71 -10.7 -3.61517 | ACGTTCGCTGAAGAA GCGAGCC TGCACC GGCTCGC CGACGCGCTGATCGG TERM 2076 3305603 - 3305550 - g 71 -11.5 -3.53811 | overlap 3305597 3305598 TCTACCTGGGGGAAA GCTGCCTGACCTTGGCGCGCACCAC GGCG GCGATGAGCACCGAGGAACGGCAGC GCTTCGCCCCCATGG Tfu_2813 3304763 - 3306058 + | hypothetical protein Tfu_2814 3306068 - 3307117 + | putative dehydrogenase Tfu_2815 3308004 - 3307123 - | alpha/beta hydrolase superfamily protein Tfu_2816 3308699 - 3308031 - | hypothetical protein Tfu_2817 3310047 - 3308809 - | phospholipase D/transphosphatidylase TERM 2077 3309441 - 3309422 - G 81 -7.2 -4.56597 | overlap 3309424 3309430 TTGGCGTTCCAAAAA TCGGAGAA GGCG TTCTCCAA CTCCCACACGGCCGG TERM 2078 3310020 - 3310031 + g 78 -5.8 -4.56597 | opp_overlap 3310008 3310020 GAATCCGCCGCAGAA CGGT CACC ACCG TTTTTCGCCGCACCA Tfu_2818 3310316 - 3311407 + | hypothetical protein Tfu_2819 3311495 - 3312589 + | hypothetical protein Tfu_2820 3312774 - 3313394 + | peptidylprolyl isomerase TERM 2079 3313516 - 3313526 + F 72 -6.8 -4.25104 | TGCCGGTGCACCGGC GCGT CCG ACGC TTTTCCTGCCCGGCA Tfu_2821 3313700 - 3316291 + | cation-transporting P-ATPase PacL Tfu_2822 3317488 - 3316349 - | homoserine O-acetyltransferase Tfu_2823 3318816 - 3317485 - | O-acetylhomoserine aminocarboxypropyltransferase TERM 2080 3318258 - 3318295 + g 71 -11.2 -3.62522 | GCGGCACACCGACCT CGTGGGCGACGTCCGC CACCGC GCGCACGTCGAGCACG TTGTTCGCCGGGTTG Tfu_2824 3320315 - 3319266 - | hypothetical protein TERM 2081 3320775 - 3320762 - H 100 -9.5 -5.40873 | AATAGAAAAATAAAA GGCCG GATC CGGCC ACGGAGGAAACGTGA TERM 2082 3321674 - 3321653 - g 88 -12.3 -4.34402 | overlap 3321666 GCTCGTACATCAAAA GCTCCTGAC CGAA GCCAGGAGC TGGTGAGAAGGGTGG Tfu_2825 3320787 - 3321680 + | LysR family transcriptional regulator Tfu_2826 3322415 - 3321732 - | intracellular protease/amidase, putative TERM 2083 3322792 - 3322755 - g 75 -4.8 -4.64334 | gap 2, overlap 3322757 AATTCTCGAAGAAAA CCGGTCCGCAACGTCGCT GCAC ATCGACG-CG-GGCCCGG CCGATATTGCCGAAT Tfu_2827 3322726 - 3323493 + | hypothetical protein Tfu_2828 3323522 - 3324061 + | peptidase C56, PfpI TERM 2084 3324069 - 3324092 + G 87 -21 -2.84634 | opp_overlap 3324050 ACCAGTGACCGGGCT GGGGGCGGCG GTGC CGCCGCCCCC TCTCCTCATGTCCGA Tfu_2829 3324058 - 3324855 + | hypothetical protein Tfu_2830 3325468 - 3324905 - | TetR family transcriptional regulator Tfu_2831 3326906 - 3325449 - | putative membrane transport protein TERM 2085 3326964 - 3326939 - H 75 -11.9 -3.46602 | opp_overlap 3326913, overlap 3326936 3326940 CGGTGGAGAGGACAA CCGGGGTGAAC GGTT GTTCACCCCAA AGATCATCCTAGTCA TERM 2086 3327042 - 3327087 + H 93 -3.8 -5.40474 | overlap 3327043 CCGCAGTTCCCACCG CTCTGCGGCCCGGACCGC CGGGACGGGA GCGCCCCCGGCTGCAGAA TTTTTTTGCCGAACT TERM 2087 3327176 - 3327145 - H 71 -10.1 -3.61902 | overlap 3327147 TCCCACCAGACACAA GACCGCCACCGCA CAGCAC CGTGGTGGCGATC GCGGGCGCGCAATCC Tfu_2832 3327338 - 3327979 + | hypothetical protein Tfu_2833 3328034 - 3330280 + | putative secreted protein Tfu_2834 3330288 - 3335246 + | hypothetical protein TERM 2088 3335265 - 3335307 + F 93 -18.5 -3.61398 | gap 1, opp_overlap 3335267, overlap 3335265 CACAGCGAGGGGAAG CAC-TGGTGGTCCTGTCCCG GGCG CGGGGCAGGACCACCGCGGG TTCTTAGGACAGGGC TERM 2089 3335265 - 3335306 + F 87 -18.7 -2.76696 | opp_overlap 3335267, overlap 3335265 CACAGCGAGGGGAAG CACTGGTGGTCCTGTCCCG GGCG CGGGGCAGGACCACCGCGG GTTCTTAGGACAGGG TERM 2090 3335303 - 3335267 - f 87 -18.8 -2.73681 | gap 1, opp_overlap 3335265 3335265 CAGCGAGGGGAAGCA CTGGTGGTCCTGTCCCG GGCG CGGGGCAGGACCACC-G CGGGTTCTTAGGACA Tfu_2835 3335427 - 3335738 + | hypothetical protein Tfu_2836 3335735 - 3336463 + | hypothetical protein TERM 2091 3336470 - 3336514 + T 80 -14.9 -3.13403 | opp_overlap 3336475 3336498, overlap 3336468 ACACGCTGATCCTGA CACGAGGGTGGGCTGCCCC AGGCATA GAGGCGGCGCACCCTCGCG TGTTACTGCAACCGG Tfu_2837 3337859 - 3336627 - | hypothetical protein Tfu_2838 3338155 - 3337871 - | hypothetical protein Tfu_2839 3338781 - 3339053 + | hypothetical protein Tfu_2840 3339078 - 3339629 + | hypothetical protein Tfu_2841 3341186 - 3339759 - | putative rifampin monooxygenase TERM 2092 3340970 - 3340982 + g 75 -6.9 -4.4009 | TCCCGGCGAAGTAGC CGCCC ACC GGGTG TTTTGTGCCGTGGGC TERM 2093 3341289 - 3341314 + H 100 -13.3 -4.79352 | TCGTACATTGGCAGT GGCGGGGATTT TTCT GGATCCCCGCC TTTTCTTGTGCCTCA TERM 2094 3341923 - 3341913 - g 76 -2.4 -4.75309 | GGAAAGGCAAGAAAA GCGG GAA CGGC GATGTCATCAAGTTC Tfu_2842 3341702 - 3342085 + | hypothetical protein Tfu_2843 3342082 - 3344805 + | TPR repeat-containing protein TERM 2095 3344884 - 3344922 + T 100 -23.8 -3.5393 | opp_overlap 3344882 3344881, overlap 3344885 3344888 3344921 CAGGTAGTTAAAGGT TGGGGTGGCCCGCCGGGG CAT CCCCGGCGGGCCGCTGCG TTTCCCCGCCCTGGT TERM 2096 3344885 - 3344921 + T 100 -25.1 -2.72144 | opp_overlap 3344882 3344881, overlap 3344884 3344888 AGGTAGTTAAAGGTT GGGGTGGCCCGCCGGGG CAT CCCCGGCGGGCCGCTGC GTTTCCCCGCCCTGG TERM 2097 3344888 - 3344918 + T 100 -27.6 -2.64155 | opp_overlap 3344882 3344881, overlap 3344885 3344884 TAGTTAAAGGTTGGG GTGGCCCGCCGGGG CAT CCCCGGCGGGCCGC TGCGTTTCCCCGCCC Tfu_2844 3347859 - 3345010 - | putative oxidoreductase TERM 2098 3346731 - 3346765 + g 74 -14.9 -3.03124 | CGGGCCAGGCTTCGT CGCCGCTGGGCGGGC GGGTG GCGAGTCCAGCGGCG TCTTCGCGGATCCGC TERM 2099 3347905 - 3347931 + r 82 -4.4 -5.0133 | gap 1 CAGCGGGGCCGGGGG CCGTCATCGCG GGGAGG CGCGG-GATGG TTTTTTAGCCGGGTG TERM 2100 3348489 - 3348531 + r 76 -6.2 -4.52347 | gap 1, overlap 3348492 3348493 CCTGGAGACTTGAGC CACCTGGG-GTCGGGGTGC GTGCGG GCGCCCCGACCCCCACTTC TTTTCCTCTTCTTTC TERM 2101 3348492 - 3348528 + r 95 -12.3 -4.33487 | gap 1, overlap 3348489 3348493 GGAGACTTGAGCCAC CTGGG-GTCGGGGTGC GTGCGG GCGCCCCGACCCCCAC TTCTTTTCCTCTTCT TERM 2102 3348493 - 3348527 + r 86 -15.8 -3.18465 | gap 1, overlap 3348492 3348489 GAGACTTGAGCCACC TGGG-GTCGGGGTGC GTGCGG GCGCCCCGACCCCCA CTTCTTTTCCTCTTC Tfu_2845 3350287 - 3348599 - | tyrosine protein kinase:Serine/threonine protein kinase Tfu_2846 3350560 - 3350871 + | hypothetical protein Tfu_2847 3351043 - 3351513 + | hypothetical protein TERM 2103 3351594 - 3351552 - T 100 -23.5 -3.02263 | gap 1 ACACGGCCCCCAACA GCAGT-TGGGCGGCGCGGGC AGCA GCCCGCACCGCCCAGACGGC AGCGTGTGGCGCGCT Tfu_2848 3353867 - 3351609 - | ATPase, E1-E2 type:copper-translocating P-type ATPase:heavy metal translocating P-type ATPase TERM 2104 3353402 - 3353412 + g 71 -2.4 -4.56597 | opp_overlap 3353356 CCATGGTGGCCTCCC CCAG CCT CAGG TTTTTGACCGCGGCG Tfu_2849 3354344 - 3354529 + | hypothetical protein Tfu_2850 3354790 - 3354999 + | hypothetical protein Tfu_2851 3355641 - 3355318 - | hypothetical protein TERM 2105 3355816 - 3355795 - R 100 -11.5 -4.8269 | opp_overlap 3355795 CACAACTACCAAAAA GCCCGGGAC AAAA GTTCCGGGC TTTTCTCCGATGCAG TERM 2106 3355795 - 3355816 + r 100 -13.7 -4.4009 | opp_overlap 3355795 CACAACTACCAAAAA GCCCGGGAC AAAA GTTCCGGGC TTTTCTCCGATGCAG TERM 2107 3356099 - 3356115 + r 73 -12.3 -3.34398 | overlap 3356097 CGCGCGGTCTTTATT CTGCCAG ACT CTGGCAG TGTTTCAGACCACCA Tfu_2852 3357918 - 3356305 - | putative integral membrane protein Tfu_2853 3357988 - 3358332 + | hypothetical protein Tfu_2854 3358495 - 3359853 + | hypothetical protein Tfu_2855 3360267 - 3360007 - | putative stress-responsive transcriptional regulator TERM 2108 3360490 - 3360457 - R 71 -3.7 -4.56597 | gap 1, overlap 3360467 3360468 GCTCCGCGGCAAAAA GCAGAGACAAGTCGTG GGG CGCG-CCGGCCCCTGC TCGGCACGCCCCACG TERM 2109 3360507 - 3360467 - R 100 -21.2 -3.69297 | gap 1, overlap 3360457 3360468 AAAAAGCAGAGACAA GTCGTGGGGCGCGCCG-GC CCCT GCTCGGCACGCCCCACGAG AACAGTCAGTGCAGA TERM 2110 3360506 - 3360468 - R 100 -24.7 -2.79952 | gap 1, overlap 3360457 3360467 AAAAGCAGAGACAAG TCGTGGGGCGCGCCG-GC CCCT GCTCGGCACGCCCCACGA GAACAGTCAGTGCAG Tfu_2856 3362493 - 3360523 - | acetyl-CoA synthetase Tfu_2857 3362709 - 3363800 + | ATP-binding region, ATPase-like Tfu_2858 3363800 - 3364594 + | response regulator receiver Tfu_2859 3364594 - 3364944 + | hypothetical protein Tfu_2860 3364944 - 3366632 + | putative transmembrane transport protein Tfu_2861 3366898 - 3367248 + | hypothetical protein Tfu_2862 3367245 - 3368858 + | Na+/solute symporter TERM 2111 3368855 - 3368844 - T 72 -3.6 -4.62069 | overlap 3368846 GCCGGAGCGGAAAAA GCGG TCTC CCAC TGACCAGCCACACGG TERM 2112 3369388 - 3369356 - T 88 -17.7 -3.05294 | overlap 3369346 CCAAAGGCTGGAACA GCCACACTGGGCAGG TCA CCTGCTCAGCGCGGC CAGCGCCCGCTCATG Tfu_2863 3369835 - 3369371 - | hypothetical protein TERM 2113 3370193 - 3370180 - H 87 -3.8 -5.14682 | TCACAACAAACAAAA GACC TAATGT GGTC AAAATAAGGATTTTC Tfu_2864 3370387 - 3370956 + | hypothetical protein TERM 2114 3370990 - 3371033 + F 100 -21.9 -3.53012 | gap 1, opp_overlap 3371029 3371032, overlap 3371030 AAACTGATTTACTTT CCTGATTGCGTGCGTCCAGG TACCT CC-GGACGCACGCAACCAGG TTTCACGAAAGAAAC TERM 2115 3371121 - 3371161 + F 77 -11.8 -3.61398 | gap 1, opp_overlap 3371146 TCATTCTGGGAGTAT CCGCCGTG-GTGGTGGCTC GATG GAACCGCCGCTCACCGCGG TTGTTCCCAAGGGAA TERM 2116 3371622 - 3371633 + G 72 -5.8 -4.36595 | ACGCCCTGCTCTTCG TGCC CATC GGCA TTTTGGCTTTCGCTG Tfu_2865 3371126 - 3371893 + | hypothetical protein TERM 2117 3372201 - 3372160 - T 100 -34.7 -3.24747 | opp_overlap 3372160 GGCGCACACGACGAA GCCCCGGGTCGGATCCTGT CTAG ACAGGATCCGACCCGGGGC TTTTGTGGTGGGCCA TERM 2118 3372160 - 3372201 + T 100 -34.7 -4.46212 | opp_overlap 3372160 GGCGCACACGACGAA GCCCCGGGTCGGATCCTGT CTAG ACAGGATCCGACCCGGGGC TTTTGTGGTGGGCCA Tfu_2866 3373546 - 3372959 - | hypothetical protein TERM 2119 3374326 - 3374299 - H 79 -4.2 -4.90918 | gap 1, opp_overlap 3374303, overlap 3374303 ACAAAACGAACAAAA CCACGAAGC-TTC CCG GAATGCTTCTTAG TGGTGAGAAGCCTCC Tfu_2867 3374477 - 3375298 + | hypothetical protein TERM 2120 3375421 - 3375390 - T 100 -18.9 -5.02074 | opp_overlap 3375378 3375390 CGAGTTTTCAAAAAA CTGTGAAGGGGAC GGCCAT GTCCCCTTCACAG TTGTCAGGATCCTTC TERM 2121 3375390 - 3375421 + T 100 -19.6 -3.32268 | opp_overlap 3375390, overlap 3375378 CGAGTTTTCAAAAAA CTGTGAAGGGGACG GCCA TGTCCCCTTCACAG TTGTCAGGATCCTTC Tfu_2868 3375772 - 3375440 - | putative Lsr2-like protein TERM 2122 3375559 - 3375569 + g 87 -8.2 -4.77036 | overlap 3375548 TCCTCTCCCGGCTGA GCGC CGT GCGC TTTTTGGTCCTGGAG TERM 2123 3376946 - 3376962 + H 93 -4.3 -5.24129 | opp_overlap 3376933 3376930 3376946, overlap 3376930 3376926 CAGCGTCTGTGAAAT GACGCGG ATT CGGTGTC TTTTTTCTGCGGGCC Tfu_2869 3377980 - 3378585 + | hypothetical protein Tfu_2870 3380460 - 3379051 - | putative integral membrane protein Tfu_2871 3381702 - 3380932 - | hypothetical protein TERM 2124 3381734 - 3381754 + H 75 -12.5 -3.45134 | overlap 3381726 ATTGTCGTGGTCCGC GGGCCACGG CAT CCGTGCCCC TTGTCCGTTCCTTAC TERM 2125 3381832 - 3381806 - H 70 -11.7 -3.31144 | gap 1, opp_overlap 3381808, overlap 3381809 GGGCTAGGGCCATAA CAG-GGAGACGT GAGA ACGTCTCCACTG ATATCCGTCGTGGAC Tfu_2872 3381982 - 3382521 + | hypothetical protein Tfu_2873 3382823 - 3383854 + | hypothetical protein Tfu_2874 3384625 - 3383870 - | hypothetical protein Tfu_2875 3384693 - 3385568 + | HhH-GPD:Iron-sulfur cluster loop TERM 2126 3385692 - 3385731 + T 100 -27.4 -3.11088 | gap 1, opp_overlap 3385695 3385698, overlap 3385698 ACAGGTCGGCGCATA CGAGAAGGAGGGGTGG-CC GGT GGACCACCCCTCCTTCTCG TGTATTGGGTGCGTT TERM 2127 3385728 - 3385695 - T 100 -23.3 -2.62184 | opp_overlap 3385692 3385698, overlap 3385698 GGTCGGCGCATACGA GAAGGAGGGGTGGCC GGTG GACCACCCCTCCTTC TCGTGTATTGGGTGC TERM 2128 3385698 - 3385725 + T 93 -17.8 -3.52475 | gap 1, opp_overlap 3385698 3385695, overlap 3385692 CGGCGCATACGAGAA GGAGGGGTGG-CC GGT GGACCACCCCTCC TTCTCGTGTATTGGG TERM 2129 3385725 - 3385698 - T 100 -19.2 -3.46602 | opp_overlap 3385692 3385698, overlap 3385695 CGGCGCATACGAGAA GGAGGGGTGGCC GGTG GACCACCCCTCC TTCTCGTGTATTGGG Tfu_2876 3388278 - 3385786 - | ATPase TERM 2130 3388590 - 3388552 - R 83 -14.6 -3.17392 | gap 1, opp_overlap 3388546, overlap 3388582 TACGCCGCAAGCGAA CGGCCCGCG-ACCCTCA ACTACG TGAGAGAACGCGGGCCG TGATGCGTGTTCGCA Tfu_2877 3389056 - 3388721 - | putative Lsr2-like protein Tfu_2878 3390040 - 3393192 + | DNA and RNA helicase Tfu_2879 3393764 - 3393189 - | N-acetylglutamate synthase Tfu_2880 3394303 - 3393920 - | regulatory protein, LuxR TERM 2131 3394332 - 3394344 + r 73 -5.5 -4.38154 | GGGATCTTTTGGTTC GCACT TTT GGTGC TTTTCTCGAAACTCT TERM 2132 3394853 - 3394808 - R 72 -8.5 -4.18018 | gap 3, opp_overlap 3394847, overlap 3394812 TCTCCTGACCGAAAA GGAAGGGCACACTCA--CGCGT AAGAG ACGCGTATGAGTGTGCCCT-CG ACAGGACTTACTTAT TERM 2133 3394850 - 3394812 - R 89 -14.8 -3.69605 | gap 2, opp_overlap 3394847, overlap 3394808 CTGACCGAAAAGGAA GGGCACACTCA--CGCGT AAGAG ACGCGTATGAGTGTGCCC TCGACAGGACTTACT lysS 3396355 - 3394865 - | lysyl-tRNA synthetase TERM 2134 3396474 - 3396434 - R 71 -11.9 -3.27489 | gap 2, opp_overlap 3396462, overlap 3396430 3396432 3396437 TGAACGGGAAAGACA CAGCGCC-GCAC-GCGGTG CATGC CACCGCCGTGCTGGCGGCG CTGGGCGGGGGGACA TERM 2135 3396471 - 3396437 - R 70 -14.4 -2.51089 | gap 2, opp_overlap 3396462, overlap 3396434 3396430 3396432 ACGGGAAAGACACAG CGCC-GCAC-GCGGTG CATGC CACCGCCGTGCTGGCG GCGCTGGGCGGGGGG Tfu_2882 3397339 - 3396563 - | pantothenate kinase Tfu_2883 3399973 - 3397370 - | L-aspartate oxidase TERM 2136 3397731 - 3397780 + g 71 -2.5 -4.56597 | gap 1, opp_overlap 3397725 3397726, overlap 3397733 TTGATCAAAGCGGCA TCCGCGAGCCCGAAGCGGTGGTTG ACC CCGCCGCCGCAGCGAAC-CGCGTA TTTTTCCAGGACGCG TERM 2137 3398207 - 3398220 + g 70 -3.7 -4.4009 | CTCTTCGTGCCATGC CACGG CGGG CCGGG TTTTCTCCGGTGCGG Tfu_2884 3400897 - 3400007 - | pantothenate synthetase TERM 2138 3400384 - 3400411 + g 75 -5.4 -4.56597 | GGTCGCGGACCATGC GGCGCACCACGG CCAG CTGTTGGGCGTC TTTTTGGCCGAAGAC Tfu_2885 3401821 - 3400931 - | hypothetical protein TERM 2139 3402033 - 3402000 - R 100 -26.1 -3.47227 | CCGGAACCACGACAA CGGCCGACACCGACC GGAA GGTCGGCGTCGGCCG TTCAGCGGATACCAC Tfu_2886 3402354 - 3402115 - | putative small membrane protein Tfu_2887 3404988 - 3402688 - | hypothetical protein Tfu_2888 3405558 - 3404992 - | hypothetical protein Tfu_2889 3406147 - 3405650 - | hypothetical protein TERM 2140 3405853 - 3405821 - G 73 -9.7 -3.83502 | CAGCGCCACAGCAAA CCCGGTGAACCCCCC GCA GGCGAGCGCACCGAG CAGCACACTGGCTTT TERM 2141 3406113 - 3406127 + g 70 -12.8 -3.35679 | CCGGTAGGACGTATC CGGCCG TTG CGGCCG TTGTCGCTCGGGGAA Tfu_2890 3406668 - 3406144 - | 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase Tfu_2891 3407045 - 3406665 - | dihydroneopterin aldolase Tfu_2892 3407479 - 3407042 - | 3-dehydroquinate dehydratase Tfu_2893 3408384 - 3407476 - | dihydropteroate synthase folE 3409122 - 3408499 - | GTP cyclohydrolase I Tfu_2895 3411163 - 3409115 - | Mername-AA223 peptidase Tfu_2896 3412060 - 3411506 - | hypoxanthine phosphoribosyltransferase Tfu_2897 3413196 - 3412222 - | helix-turn-helix, Fis-type TERM 2142 3412802 - 3412850 + g 72 -5.9 -4.36914 | gap 1, overlap 3412803 GTCTCGGCCTGGTCG TCGCGGGTGTGCCCCAG-CAGC ACCGCG GCTGCCTGGTGGACGTCGGCGG TTTTCTCCAGGGCCG Tfu_2898 3414324 - 3413215 - | hypothetical protein Tfu_2899 3414456 - 3414899 + | hypothetical protein Tfu_2900 3415428 - 3414889 - | hypothetical protein TERM 2143 3416373 - 3416407 + G 83 -15 -3.54543 | gap 1 ACGCTGCCTGCACGG CGTGCCGCG-GAGCG GATCAG CGCTCACGCGGCCCG TTTGGAACGCTCCCT Tfu_2901 3415965 - 3416630 + | hypothetical protein TERM 2144 3416646 - 3416688 + T 75 -10.3 -3.85698 | CGGGTCTGTCTGCCC GCCGGGCGCGGCCGTGCGG AACCG CGGTGCGGCCCGGACCGGC TTTCTCGGCAGGGGC Tfu_2902 3417742 - 3417227 - | inorganic diphosphatase Tfu_2903 3417823 - 3419217 + | peptidase S13, D-Ala-D-Ala carboxypeptidase C Tfu_2904 3419620 - 3419279 - | hypothetical protein TERM 2145 3419870 - 3419887 + H 81 -3.5 -5.02074 | gap 1, overlap 3419873 ATTGTGATCTTCTTG CA-ACCAT GAC ATGGTGTG TTTTTTGCCCAATCA TERM 2146 3420190 - 3420169 - g 72 -5.1 -4.42491 | overlap 3420172 GAAAAAACAGAGAAA GATCCGATC ATGG GATCGATTC GGGAGGAGGCGAGCC Tfu_2905 3420132 - 3421424 + | putative transmembrane transport protein ispF 3421924 - 3421460 - | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase Tfu_2907 3422445 - 3421963 - | CarD family transcriptional regulator TERM 2147 3422830 - 3422794 - R 93 -19.5 -2.85351 | overlap 3422774 CCGCCCCACACGACA TGGGCGAGCCCGGCC CTCTCGC GGCCGAACTCGCCCA CTCCCCGTAGCAAAA TERM 2148 3422878 - 3422858 - R 81 -4.6 -4.88129 | AAAAACCAGTAAAAA TCCCGGCA ACTCG CGGCGGGA CGAGGTGGCACAGCC Tfu_2908 3423736 - 3423041 - | phosphate uptake regulator, PhoU TERM 2149 3423496 - 3423522 + g 71 -10.1 -3.72968 | GCGCCACGGGCTGCT GCCGTGCCATG AGCGC CATGGCGCTGC TTTCGATCTCGTCGT Tfu_2909 3423872 - 3425005 + | sensor histidine kinase Tfu_2910 3425002 - 3425694 + | response regulator receiver Tfu_2911 3426520 - 3425777 - | phosphoglycerate mutase TERM 2150 3426212 - 3426227 + g 75 -8.2 -4.15884 | CTCGTCACCGAATTC GGCGCG GGTC TGCGCC TTGTTCTTTCCTTGG Tfu_2912 3427118 - 3426597 - | hypothetical protein TERM 2151 3426656 - 3426674 + g 71 -9.5 -3.737 | overlap 3426657 GGAAGGCTTTCAGGT TGCGGCG GCTCA CGCCGCG TTTGGTGCGCCATTC Tfu_2913 3428499 - 3427195 - | putative glycosyltransferase Tfu_2914 3429210 - 3431189 + | hypothetical protein Tfu_2915 3431286 - 3431528 + | hypothetical protein TERM 2152 3431548 - 3431582 + F 86 -14.3 -3.75665 | opp_overlap 3431553, overlap 3431549 TGCGGACCTTCTTGG AGGAAGCGCCCCG TCACCGCCC CGGGGCGCTTCCG TTTCATGCGCTCTGG TERM 2153 3431549 - 3431581 + F 87 -17.8 -2.85078 | opp_overlap 3431553, overlap 3431548 GCGGACCTTCTTGGA GGAAGCGCCCCG TCACCGCCC CGGGGCGCTTCC GTTTCATGCGCTCTG Tfu_2916 3431689 - 3432153 + | transcriptional regulator Tfu_2917 3432158 - 3433102 + | integral membrane protein Tfu_2918 3433189 - 3433503 + | hypothetical protein Tfu_2919 3434468 - 3433509 - | metalloprotease TERM 2154 3433982 - 3433971 - G 76 -7.2 -4.25104 | overlap 3433972 CGCTCTGCAGTAAAA GCCG CCCG CGGC TGACGGGTAGTCGCG Tfu_2920 3435448 - 3434480 - | hypothetical protein TERM 2155 3436502 - 3436467 - g 74 -12.5 -3.54424 | gap 1, opp_overlap 3436459, overlap 3436439 TCGGAGGCGCGGAAA GCCGACCACGCCCCCG TAGAG CCGGGG-GTGGGCGGC AGCCTGCAGTTCCAT Tfu_2921 3435609 - 3437354 + | hypothetical protein Tfu_2922 3437368 - 3437793 + | D-tyrosyl-tRNA deacylase TERM 2156 3437991 - 3437966 - f 91 -11.1 -4.54727 | opp_overlap 3437968, overlap 3437968 CGCGCGAAAGGAAAA GTCGATGACGG AAAC CCGTCACCGTC CTTCGCGGCGAGCCA Tfu_2923 3437970 - 3439445 + | xylanase TERM 2157 3439471 - 3439501 + T 93 -19.6 -2.87564 | opp_overlap 3439473 CGTTGAGGTGAACCA CACCGGGGCCGCCC CAA GGGCGGCCCCGGCC TCTCTCCACAGCTCC TERM 2158 3439499 - 3439473 - T 100 -26.6 -2.91274 | opp_overlap 3439471 TTGAGGTGAACCACA CCGGGGCCGCCC CAA GGGCGGCCCCGG CCTCTCTCCACAGCT Tfu_2924 3439930 - 3439568 - | hypothetical protein Tfu_2925 3440535 - 3440173 - | hypothetical protein Tfu_2926 3441278 - 3440739 - | hypothetical protein Tfu_2927 3441568 - 3442053 + | hypothetical protein Tfu_2928 3443068 - 3442127 - | glycine betaine transport system permease protein Tfu_2929 3444414 - 3443167 - | polysaccharide/polyol phosphate ABC transporter permease Tfu_2930 3445487 - 3444411 - | glycine betaine/L-proline transport ATP-binding subunit Tfu_2931 3445966 - 3446595 + | hypothetical protein dcd 3447179 - 3446589 - | deoxycytidine triphosphate deaminase TERM 2159 3447436 - 3447391 - H 86 -16.2 -3.29144 | gap 1, overlap 3447392 TCATCCGCTCCACAA GC-GAAGGCCCAGGTCAGGGA GATCA TCCCGAGCCTGGGCCTTCAGC GTTGAAAGAGCGCCT TERM 2160 3447434 - 3447392 - H 81 -16.3 -2.57344 | overlap 3447391 CATCCGCTCCACAAG CGAAGGCCCAGGTCAGGGA GATCA TCCCGAGCCTGGGCCTTCA GCGTTGAAAGAGCGC Tfu_2933 3447542 - 3448048 + | hypothetical protein Tfu_2934 3448070 - 3448501 + | hypothetical protein Tfu_2935 3448483 - 3449559 + | hypothetical protein Tfu_2936 3449878 - 3450798 + | hypothetical protein Tfu_2937 3451019 - 3451471 + | hypothetical protein TERM 2161 3451749 - 3451771 + G 78 -9.9 -4.17296 | gap 1 TCCATCCCCACGTGC GTGGG-GCTC ACGG GAGCACCCAC TTTGTGTGTCTCGGG Tfu_2938 3451543 - 3451974 + | hypothetical protein Tfu_2939 3451993 - 3452472 + | hypothetical protein TERM 2162 3452831 - 3452791 - T 84 -16.9 -2.90392 | GATCCTTGAAGCAGA CGACTGAGGGCAGGCATCT CTC AGGTGCTCGCCCTCAGTCA CAGGTGGCGCACTCG TERM 2163 3453265 - 3453289 + T 72 -12.7 -3.14564 | GGTAGCTCCGGACCG GGCGGCGGCGC GCA GCGCCAACGCC TTGATCCCCACATAG Tfu_2940 3453811 - 3453344 - | mutT-like protein Tfu_2941 3453830 - 3454609 + | GntR family transcriptional regulator TERM 2164 3454681 - 3454702 + F 70 -11.7 -3.32727 | opp_overlap 3454681 3454699, overlap 3454697 CTCTTGCCCATGCAA CTCATGTAC ATGA GTACATGAG TTCATCTCATGTTAA Tfu_2942 3455044 - 3455421 + | hypothetical protein Tfu_2943 3455521 - 3456261 + | GntR family transcriptional regulator Tfu_2944 3456616 - 3456392 - | hypothetical protein Tfu_2945 3456601 - 3456771 + | hypothetical protein TERM 2165 3457154 - 3457131 - g 71 -10.2 -3.71527 | overlap 3457132 GGCGAAGCACTCAAA CGCCGCGCAG CACT CCACGCGGCA CAAGCCGCCCCAACG Tfu_2946 3456946 - 3457338 + | hypothetical protein Tfu_2947 3457408 - 3457941 + | DNA integration/recombination/invertion protein Tfu_2948 3457944 - 3458276 + | putative phage integrase TERM 2166 3458587 - 3458613 + F 100 -22.4 -3.59979 | opp_overlap 3458587 AGAGCGTTAGCACAA GGGCCACTCCTC GAT GAGGAGTGGCCC TTTGACGTGCGCGCA TERM 2167 3458613 - 3458587 - f 100 -22.4 -3.41229 | opp_overlap 3458587 AGAGCGTTAGCACAA GGGCCACTCCTC GAT GAGGAGTGGCCC TTTGACGTGCGCGCA TERM 2168 3458746 - 3458736 - f 80 -5.4 -4.72272 | TGCCGTCATCAAAAA CTGT AGC ACAG CGCCGGAGCTGCCTT Tfu_2949 3458867 - 3460336 + | succinate semialdehyde dehydrogenase TERM 2169 3460388 - 3460347 - f 93 -19.3 -2.91681 | TGTGAAGCCTAGACA GCGCGAAGGCCCCGCCTGG AGTT CCTGGCGGGGCCTGCACGT TCGCGGAGCGGTGCG TERM 2170 3460814 - 3460827 + F 82 -4.5 -5.01497 | GGTCCTCGCAGAGAT TCCCT GCTC GGGGA TTTTTCTCTGCTGGT Tfu_2950 3460989 - 3461654 + | LuxR response regulator receiver Tfu_2951 3461693 - 3462130 + | hypothetical protein Tfu_2952 3462506 - 3463039 + | hypothetical protein TERM 2171 3463191 - 3463216 + F 100 -11.3 -5.54907 | gap 1 GGATTATCATGGTTT TTCCGTCTC-GT TCA ACAGAGACGGAA TTTTTCTTTTCTGGG Tfu_2953 3463623 - 3464330 + | putative transcriptional regulator Tfu_2954 3464938 - 3464378 - | hypothetical protein TERM 2172 3464573 - 3464615 + g 82 -15.5 -3.44051 | gap 1, overlap 3464574 GCTGGCGCTGTGCTG TGC-GCCCTCAGCGGCTCCG GCGC CGGGGCCGGAGAGGGCCGCG TTCTCCTGCTGGGGG TERM 2173 3464574 - 3464614 + g 73 -16.8 -2.66216 | gap 1, overlap 3464573 CTGGCGCTGTGCTGT GC-GCCCTCAGCGGCTCCG GCGC CGGGGCCGGAGAGGGCCGC GTTCTCCTGCTGGGG Tfu_2955 3465921 - 3465202 - | hypothetical protein TERM 2174 3466191 - 3466155 - R 100 -18.9 -3.18264 | gap 1 TGTGGGATTGACTAA TGGTGGCGGTCG-GGA GTGCGG TCCTCGACCGCCACCA CAGGAAGCCCCGACG TERM 2175 3466268 - 3466312 + r 100 -12.8 -4.85599 | gap 1, overlap 3466270 3466270 CAGCCGTTGAGCGCC CTC-GCGGGAGCGGCCGGG AGCGCGGA CTCGGCCGCTCCCGCCGTC TTTTTCTGCCCTCCC TERM 2176 3466270 - 3466310 + r 100 -19.8 -4.05067 | gap 1, overlap 3466268 3466270 GCCGTTGAGCGCCCT C-GCGGGAGCGGCCGGG AGCGCGGA CTCGGCCGCTCCCGCCG TCTTTTTCTGCCCTC TERM 2177 3466270 - 3466309 + r 100 -20 -3.02317 | overlap 3466270 3466268 GCCGTTGAGCGCCCT CGCGGGAGCGGCCGGG AGCGCGGA CTCGGCCGCTCCCGCC GTCTTTTTCTGCCCT TERM 2178 3466327 - 3466337 + r 70 -4.6 -4.4078 | CTTTTTCTGCCCTCC CCTG GTC CGGG TTTTCCTTAGCGCGG Tfu_2956 3467705 - 3466344 - | cell envelope-related transcriptional attenuator Tfu_2957 3467787 - 3468365 + | hypothetical protein Tfu_2958 3468365 - 3468742 + | hypothetical protein TERM 2179 3468817 - 3468768 - T 75 -9.9 -3.96216 | gap 1, overlap 3468769 3468772 CGGGCAGGGAAACAA CGG-AGACGGGCGGCAGCTCCTCC CCC GGGAAAGCCACCGCCCGCTTGCCA TCCCCCCAGCGTCCT Tfu_2959 3469597 - 3468920 - | LuxR response regulator receiver TERM 2180 3469636 - 3469661 + r 73 -9.7 -3.85698 | gap 1, overlap 3469639 CCTGGTGGACGTAGT GGACGGGTCAGC GGT GC-GACCCGTGC TTTCTGACGAGGGGA Tfu_2960 3471171 - 3469687 - | ATP-binding region, ATPase-like TERM 2181 3470207 - 3470241 + g 84 -9.8 -4.41494 | overlap 3470209 ATCCGGTTCAGCTCT GCGGACAGTGCGGCGC GCA GAGCGGCACGGTCCAC TTTTCCTTCCGGGTC Tfu_2961 3472029 - 3471217 - | signal peptidase SipW TERM 2182 3471967 - 3471979 + g 83 -4.7 -4.87133 | overlap 3471959 3471968 GCGGGCCTGGTCATC GCCGG AGA CCGGA TTTTCTTTGCGAGGT Tfu_2962 3472923 - 3472147 - | hypothetical protein Tfu_2963 3473458 - 3472916 - | hypothetical protein TERM 2183 3473667 - 3473711 + H 81 -15.6 -3.01712 | gap 1, opp_overlap 3473649, overlap 3473707 CACATCCCCCTGACG GCCCCGCTG-CGCTACCGCGG GAGG CCGCGGAGGCGGCAACGGGAC TGTTCGGCGCGCACG Tfu_2964 3473823 - 3474449 + | hypothetical protein TERM 2184 3474459 - 3474487 + F 83 -14.5 -3.18383 | opp_overlap 3474449, overlap 3474460 AACTAGGCGTGCCAT CCCCGCACCGGCG CTG TGTCGGTGCGGGA TTGGTCCATGGCCGT TERM 2185 3474460 - 3474486 + F 86 -18 -2.50816 | opp_overlap 3474449, overlap 3474459 ACTAGGCGTGCCATC CCCGCACCGGCG CTG TGTCGGTGCGGG ATTGGTCCATGGCCG TERM 2186 3474580 - 3474542 - g 76 -3 -4.78107 | gap 1, opp_overlap 3474567 3474577, overlap 3474544 GAGCATGAGGAAAAA GACAGCACTGGTCCTGG GAGTGG CCACGGCCTGTGCCG-C ATTGCTGTTGACTCT Tfu_2965 3474531 - 3475115 + | hypothetical protein Tfu_2966 3475126 - 3475728 + | hypothetical protein Tfu_2967 3476294 - 3475794 - | hypothetical protein Tfu_2968 3477038 - 3476757 - | hypothetical protein Tfu_2969 3477918 - 3477313 - | hypothetical protein TERM 2187 3479946 - 3479931 - g 72 -5.4 -4.44667 | gap 1, opp_overlap 3479931 GTCGTCAACAAGAAA CCCGAGA TCA TC-CGGG TCTATCTCCCGCCGG Tfu_2970 3478272 - 3480650 + | putative phosphoketolase TERM 2188 3481539 - 3481584 + G 76 -8.1 -4.38712 | gap 1, opp_overlap 3481546, overlap 3481540 TCACCGGGGGTGTGG GCGAGAACCAGCCGCTGGTGCG CTC CGGGGCGGCGGCTGGG-CTCGG TTTTCTCGGCGTGCG TERM 2189 3481628 - 3481672 + G 70 -12.3 -3.27298 | gap 3, opp_overlap 3481647, overlap 3481631 GCCGATCGGGGCGCG GAACCGGACGCCGAGGTAACCG GGGA CGGTT-CC-C-GCGTCCGGGTC TTCGTGGTTGCGGCG Tfu_2971 3480650 - 3481735 + | acetate kinase Tfu_2972 3481827 - 3482249 + | hypothetical protein Tfu_2973 3482804 - 3482328 - | putative mutT-like protein Tfu_2974 3483540 - 3482944 - | hypothetical protein Tfu_2975 3484094 - 3485452 + | putative cytochrome P450 Tfu_2976 3485416 - 3486519 + | cytochrome P450-family protein Tfu_2977 3486957 - 3486622 - | putative Lsr2-like protein TERM 2190 3487160 - 3487133 - R 70 -4.9 -4.36914 | overlap 3487136 TCTCCGTTTAGAAAA CCAGCTTCATT TTACCT AATGAAGCGAG GCAAGAAAACACACT TERM 2191 3487978 - 3487956 - R 100 -11.3 -5.07486 | gap 1 TAGCTGCAAGAAAAA CGCCCTCTCG ATAC CG-GAGGGCG CGCGGCCGCGCCATT Tfu_2978 3489130 - 3488048 - | putative glycosyltransferase Tfu_2979 3491324 - 3489186 - | hypothetical protein TERM 2192 3489873 - 3489887 + g 82 -4.2 -5.0538 | opp_overlap 3489873 3489874, overlap 3489874 CTCCGGCTGCCAGAA CCGTTC GTT GAACGC TTTTTTGAGGTCGGC Tfu_2980 3492805 - 3491597 - | (S)-2-hydroxy-acid oxidase Tfu_2981 3492991 - 3493440 + | hypothetical protein Tfu_2982 3493603 - 3494142 + | hypothetical protein TERM 2193 3494187 - 3494245 + T 73 -12.4 -3.31365 | gap 1, opp_overlap 3494173 3494172 3494165, overlap 3494179 3494181 3494234 TCGAGAACCCCACGG CGGTGGTCTCGTCCTCTGGCTCGCC CTTCGTGACA GGCGGGCC-GAGGGCAGGGACACCG TCTTCTGCTGTGGTG TERM 2194 3494341 - 3494313 - T 88 -17.3 -3.17075 | opp_overlap 3494339 TGTCGGGGAAGGGAA CGGCCCCGGCGGC AGC GCGGTCGGGGCCG TTCCCCGGTGCGGTG Tfu_2983 3495134 - 3494358 - | hypothetical protein TERM 2195 3495193 - 3495207 + r 72 -8.6 -4.08216 | opp_overlap 3495193 3495184, overlap 3495192 CGACAACCGACACTA CCGAAT CGG ATTCGG TTTTGCGGGAGGTGG Tfu_2984 3496279 - 3495422 - | hypothetical protein TERM 2196 3496590 - 3496538 - R 77 -13.3 -3.36515 | overlap 3496536 3496541 CTCTATTCCGAAATA TGACGGGCCCTCCTGCCCCGTTG GACGGAA CTACGGAGCAAGAGGGCCCTACC GTCATCGAAAGAGTG TERM 2197 3496587 - 3496541 - R 89 -18 -2.84801 | overlap 3496538 3496536 TATTCCGAAATATGA CGGGCCCTCCTGCCCCGTTG GACGGAA CTACGGAGCAAGAGGGCCCT ACCGTCATCGAAAGA Tfu_2985 3497703 - 3496693 - | hypothetical protein Tfu_2986 3498259 - 3497723 - | hypothetical protein TERM 2198 3498275 - 3498300 + H 71 -7.5 -4.07868 | opp_overlap 3498277 3498279 CGGTGCTCCTTGCAA GAGATCGGTGG TACC CCAGCGACCTC TTTATATCACTATCC TERM 2199 3498407 - 3498381 - H 78 -7.9 -4.3467 | overlap 3498397 AGCCGCAGAGGAAAA CTGACCGACGG AAACA CCGCGGGCCAG CAGCATGCGCCCAGC TERM 2200 3498894 - 3498907 + H 93 -5.3 -5.28176 | opp_overlap 3498894 TGCTCAGGTGTAAGA TTGCA TTCA TGCAA TTTTTTGTGAGTGAC Tfu_2987 3498934 - 3499593 + | hypothetical protein TERM 2201 3499845 - 3499857 + G 72 -6.2 -4.25104 | opp_overlap 3499830 CTCGGCGACCTCATC GGCC GCAAA GGCC TTTTCCTCGCCGCCA Tfu_2988 3499590 - 3501134 + | EmrB/QacA family drug resistance transporter TERM 2202 3501426 - 3501436 + G 70 -3.2 -4.45664 | GAGTCTGCTCCTCGC GTCA CTC TGGC TTTTCCTTGCCTTCC Tfu_2989 3501259 - 3501525 + | hypothetical protein Tfu_2990 3501674 - 3502774 + | cellulose-binding family II protein TERM 2203 3502788 - 3502818 + T 85 -8.1 -4.62069 | opp_overlap 3502775, overlap 3502791 AACCGTCTCCGCCAG CCGGGGGTGCGGC CCAGT GCCGCGCCCCTTC TTTTTCCACTCGGGA TERM 2204 3502791 - 3502815 + T 100 -16.4 -4.42748 | overlap 3502788 CGTCTCCGCCAGCCG GGGGTGCGGC CCAGT GCCGCGCCCC TTCTTTTTCCACTCG Tfu_2991 3503450 - 3502878 - | hypothetical protein Tfu_2992 3503905 - 3503465 - | hypothetical protein Tfu_2993 3504543 - 3503947 - | hypothetical protein Tfu_2994 3504614 - 3505909 + | putative transport protein Tfu_2995 3506915 - 3505917 - | hypothetical protein TERM 2205 3506842 - 3506891 + g 79 -7 -4.45117 | opp_overlap 3506854 3506865, overlap 3506854 CACCCTTCGGAGCCG TCCGCGGTAATACGGTCGACGA AGTGGC TCGGCGACCGTTTGAACTCGGG TTTGTTTGACGTGTC Tfu_2996 3507054 - 3507566 + | hypothetical protein Tfu_2997 3507957 - 3510290 + | hypothetical protein Tfu_2998 3511116 - 3510349 - | hypothetical protein Tfu_2999 3511874 - 3511302 - | hypothetical protein TERM 2206 3511960 - 3512004 + r 100 -25.8 -3.53012 | gap 1 AATGCGGAGAGTGGT GCGGGCCAGGACGTGCGGAGG CTTG CC-CCGTCCGTCCTGGCCCGC TTTCAACCGACCGCC Tfu_3000 3513099 - 3512224 - | hypothetical protein TERM 2207 3513368 - 3513322 - H 70 -11.5 -3.31144 | gap 1, overlap 3513326 3513358 CCGCCACGCGGATAA CCG-ACCGGAGTCTCCGGCAGC GGAC GCAGCCGGAAAGCCCGACGCGG CCTGCAGTCCGCCAG Tfu_3001 3514045 - 3516510 + | ribonucleoside-diphosphate reductase Tfu_3002 3516580 - 3517644 + | ribonucleotide-diphosphate reductase subunit beta Tfu_3003 3518811 - 3517735 - | putative O-methyltransferase TERM 2208 3518499 - 3518484 - G 71 -2.4 -4.54047 | overlap 3518486 CCAGTTCACACAAAA GTGCGG CGTT CCACCC GGTTCCGGTGCCGAT Tfu_3004 3519966 - 3519412 - | hypothetical protein Tfu_3005 3521550 - 3520000 - | hypothetical protein Tfu_3006 3521672 - 3522277 + | hypothetical protein Tfu_3007 3522678 - 3522283 - | hypothetical protein pyrE 3522681 - 3523214 + | orotate phosphoribosyltransferase TERM 2209 3523255 - 3523210 - T 77 -12.1 -3.58343 | gap 4 TCGACGATCTGGAAA TCTGA--AGG-CCCGCCGTGCCC TGCC GGGC-CGGCGGGGCCTACTCAGA TTCAGACTCGGATTC Tfu_3009 3523657 - 3523247 - | hypothetical protein Tfu_3010 3524018 - 3525040 + | fructose-bisphosphate aldolase TERM 2210 3525067 - 3525100 + F 100 -20.4 -3.15861 | gap 1, opp_overlap 3525052 3525042, overlap 3525068 GCGGCGTTCTACGCT C-CTTGGGCCCCCGG TTTTC CCGGGGGCCCAAGTG TTCATACCGGTCATC TERM 2211 3525068 - 3525098 + F 100 -24.1 -3.14051 | opp_overlap 3525042, overlap 3525067 CGGCGTTCTACGCTC CTTGGGCCCCCGG TTTTC CCGGGGGCCCAAG TGTTCATACCGGTCA Tfu_3011 3525144 - 3525560 + | hypothetical protein TERM 2212 3525676 - 3525650 - f 79 -15.1 -3.01712 | overlap 3525635 CCTCGTTGTGCAAGA GCCCCTGCCGC TTCTT GCGCCAGGGGC TTCGGCACGTTCGGG Tfu_3012 3525736 - 3527019 + | adenylosuccinate synthetase Tfu_3013 3527140 - 3528414 + | phosphoribosylamine--glycine ligase Tfu_3014 3528704 - 3530011 + | adenylosuccinate lyase hemH 3530087 - 3531010 + | phosphoribosylaminoimidazole-succinocarboxamide synthase Tfu_3016 3531400 - 3532695 + | UDP-N-acetylglucosamine 1-carboxyvinyltransferase TERM 2213 3532754 - 3532704 - f 72 -8.3 -4.11216 | gap 2, opp_overlap 3532696 3532713 3532715 3532716 CTCCTAGTCCGAAAA GTCGGATTCGCTGCGGGCGGGAAGA ACG TCTTCCCGCCCGC-GT-ATTTTGAC GTTCTGGAGAAAACG TERM 2214 3532713 - 3532747 + F 100 -16.4 -4.21936 | opp_overlap 3532704, overlap 3532715 3532716 CGAAAAGTCGGATTC GCTGCGGGCGGGAAGA ACG TCTTCCCGCCCGCGTA TTTTGACGTTCTGGA TERM 2215 3532715 - 3532745 + F 100 -23.4 -3.70689 | opp_overlap 3532704, overlap 3532713 3532716 AAAAGTCGGATTCGC TGCGGGCGGGAAGA ACG TCTTCCCGCCCGCG TATTTTGACGTTCTG TERM 2216 3532716 - 3532744 + F 100 -24.7 -2.8169 | opp_overlap 3532704, overlap 3532715 3532713 AAAGTCGGATTCGCT GCGGGCGGGAAGA ACG TCTTCCCGCCCGC GTATTTTGACGTTCT Tfu_3017 3532891 - 3534216 + | hypothetical protein TERM 2217 3534251 - 3534210 - T 72 -11.6 -3.51365 | gap 2, opp_overlap 3534240 3534244 GGACAGGGCAGACAA CAGG-TAGCCGCCGGA-CGG CCGT CAGCTCCGGCGGCTGGCCTG CCACAGCCCGGAGGC Tfu_3018 3535345 - 3534266 - | putative aminotransferase Tfu_3019 3535540 - 3536259 + | hypothetical protein Tfu_3020 3537243 - 3536473 - | hypothetical protein Tfu_3021 3538256 - 3537240 - | hypothetical protein TERM 2218 3538466 - 3538450 - H 77 -8.7 -4.21194 | CCTGAGCAGGGAAAA CACGGAC ATC GTCCATG CCACAGTGAGAACAC TERM 2219 3538988 - 3538973 - g 75 -8.2 -4.11216 | TGGGCACGGTGAAAA GCACGG TCTC CCGCGC CGTGGCGAAGCTGCG Tfu_3022 3538528 - 3539055 + | putative RNA polymerase sigma factor TERM 2220 3539324 - 3539365 + T 100 -19.5 -4.15543 | gap 1, opp_overlap 3539332, overlap 3539328 AATCCCCGATCCTCC GCGACAGAGCCGGGACCTCG ACA CGAGGTCCCGGCTCACT-GC TTTTCCCGCTCTTTG TERM 2221 3539328 - 3539362 + T 100 -20 -3.09272 | opp_overlap 3539332, overlap 3539324 CCCGATCCTCCGCGA CAGAGCCGGGACCTCG ACA CGAGGTCCCGGCTCAC TGCTTTTCCCGCTCT TERM 2222 3539358 - 3539332 - T 100 -23.8 -2.87211 | opp_overlap 3539328 3539324 ATCCTCCGCGACAGA GCCGGGACCTCG ACA CGAGGTCCCGGC TCACTGCTTTTCCCG Tfu_3023 3539938 - 3539426 - | flavodoxin Tfu_3024 3540154 - 3540945 + | transmembrane protein Tfu_3025 3541012 - 3542154 + | putative alcohol dehydrogenase Tfu_3026 3542166 - 3542564 + | hypothetical protein TERM 2223 3542588 - 3542616 + T 100 -23.9 -2.63596 | overlap 3542590 GCACCTGAGGCCGAC GAGGGCGCCCCGC CGG GTGGGGCGCCCTC TGCTGTCGGCTGGGA TERM 2224 3542590 - 3542614 + T 100 -20.7 -2.85999 | overlap 3542588 ACCTGAGGCCGACGA GGGCGCCCCGC CGG GTGGGGCGCCC TCTGCTGTCGGCTGG Tfu_3027 3543359 - 3542712 - | reduced coenzyme F420:NADP oxidoreductase Tfu_3028 3544028 - 3543510 - | regulatory protein, MarR Tfu_3029 3544440 - 3544075 - | camphor resistance protein CrcB Tfu_3030 3544907 - 3544437 - | camphor resistance protein CrcB Tfu_3031 3545032 - 3546705 + | coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductase Tfu_3032 3547657 - 3546734 - | hypothetical protein Tfu_3033 3547922 - 3548599 + | helix-hairpin-helix DNA-binding motif-containing protein Tfu_3034 3548596 - 3549540 + | hypothetical protein TERM 2225 3550179 - 3550143 - g 81 -7.3 -4.62302 | GAAGACGGTGAAAAA CTACGTGTCCAGCAT CCTCGCC AAGCTGGACATGCAG CGCCGCACCCAGGCT Tfu_3035 3549577 - 3550248 + | LuxR response regulator receiver Tfu_3036 3550276 - 3551166 + | hypothetical protein Tfu_3037 3551163 - 3551510 + | hypothetical protein TERM 2226 3551532 - 3551566 + T 100 -21.6 -2.86164 | opp_overlap 3551532 CTTGCAATAGACGAA GGCTGTTCCCCGGA CTTCGGA TCCGGGGAACAGCC TCTCCTCCTTACGCC TERM 2227 3551566 - 3551532 - T 100 -22.3 -3.37493 | opp_overlap 3551532 CTTGCAATAGACGAA GGCTGTTCCCCGGAC TTCGG ATCCGGGGAACAGCC TCTCCTCCTTACGCC Tfu_3038 3552164 - 3551796 - | hypothetical protein Tfu_3039 3552584 - 3552231 - | hypothetical protein TERM 2228 3552328 - 3552342 + g 76 -7.1 -4.30416 | AGCCCCGCGACAGGG GGACG GTGTG CGTCC TTTTCCATTCCTGCT TERM 2229 3552656 - 3552629 - R 74 -4.7 -4.57073 | overlap 3552630 CATCCCCCGTAAAAA GGCGGTAGGCG GACACG CGCACACCGCA ACGCATTCGGCTGCT TERM 2230 3552788 - 3552769 - R 75 -2.8 -4.82901 | gap 1, overlap 3552770 TGGTCCCTAGAAAAA TCGGCCGAC ATT GTCGGT-GA CGACAAACCCGCGGC Tfu_3040 3555558 - 3552841 - | ATPase, E1-E2 type TERM 2231 3554998 - 3554962 - G 83 -12.2 -4.07885 | gap 1 CATCGTCCCCGAAAA CG-CGACGCCGCTGCGG TCCC CCACCCCGGCGTCGGCG GCCGCCGTCGCCGTG Tfu_3041 3556590 - 3555613 - | putative stress-inducible protein Tfu_3042 3556781 - 3557506 + | CBS Tfu_3043 3557639 - 3558421 + | HAD family beta-phosphoglucomutase hydrolase Tfu_3044 3558418 - 3560832 + | trehalose 6-phosphate phosphorylase Tfu_3045 3560914 - 3561417 + | hypothetical protein Tfu_3046 3561570 - 3563288 + | GAF:ATP-binding region, ATPase-like TERM 2232 3563426 - 3563404 - T 70 -14.2 -2.59431 | overlap 3563400 3563412 GCGTGGCAGAATTGA CCGTGAAACG CCC CGTTCCACGG GAAACCAGGAAGTCT Tfu_3047 3564441 - 3563452 - | phosphoesterase, PA-phosphatase related TERM 2233 3563600 - 3563563 - G 78 -10.5 -4.1891 | gap 1 TCTCCGGAACAGAAA CGGC-CAGGACCGGCCGT GGA ACGGCCACCACTGCGCCG TGCGCCCTTCGGGGA Tfu_3048 3564947 - 3565624 + | GntR family transcriptional regulator Tfu_3049 3565896 - 3566993 + | pyruvate dehydrogenase (lipoamide) Tfu_3050 3567014 - 3568009 + | dehydrogenase complex, E1 component, beta subunit Tfu_3051 3568020 - 3569315 + | pyruvate dehydrogenase complex, E2 component, dihydrolipoamide acetyltransferase TERM 2234 3569323 - 3569368 + T 100 -24.8 -3.01712 | gap 1 TGCTGTAGCCCGTAT CCCGTGCAGAGCCCGCCCTGC CTTCC GCGGGGCGGGCTCTGC-CGCG TGTTCCGGAGCCCAC Tfu_3052 3570279 - 3569500 - | hypothetical protein Tfu_3053 3571643 - 3570696 - | prephenate dehydratase Tfu_3054 3572457 - 3571654 - | glycosyltransferase involved in cell wall biogenesis Tfu_3055 3572926 - 3572471 - | anti-sigma factor antagonist Tfu_3056 3573418 - 3572936 - | putative regulatory protein Tfu_3057 3573981 - 3573430 - | hypothetical protein TERM 2235 3573913 - 3573862 - G 82 -18.6 -2.94062 | gap 1 GACACCAAGACGACA GCCGCGGACAC-GCCCTCCAGCCGG GCA CAGGCCGGCGTGCCGTGCCCGCAGC ACTCCTCGCCTGCGG TERM 2236 3573977 - 3573960 - G 82 -14.1 -3.81951 | TCCGACAGCAGGAAA GGGCCGC CGCA GCGGCCC CCACGCTGAGCGCTC Tfu_3058 3574336 - 3574004 - | rhodanese-like Tfu_3059 3574417 - 3574875 + | hypothetical protein TERM 2237 3574891 - 3574915 + F 74 -12.7 -3.28712 | opp_overlap 3574893, overlap 3574892 CCGTCGGAAAAGAAC AAGGCCCCGGC ACT GCCGGGGCCGC TTGTGGGCGGGGAGG TERM 2238 3574892 - 3574914 + F 77 -16.2 -2.57132 | opp_overlap 3574893, overlap 3574891 CGTCGGAAAAGAACA AGGCCCCGGC ACT GCCGGGGCCG CTTGTGGGCGGGGAG TERM 2239 3574913 - 3574893 - f 100 -19.7 -4.20868 | opp_overlap 3574892 3574891 GTCGGAAAAGAACAA GGCCCCGGC ACT GCCGGGGCC GCTTGTGGGCGGGGA TERM 2240 3575088 - 3575118 + F 76 -6.1 -4.5442 | gap 1, overlap 3575091 3575092 GCGGTGTGCCTCAAG GCTAGCACGGTCTC AGAG GAGTCCGTGC-ATC TTTTCTCCTTCACCG Tfu_3060 3575227 - 3575988 + | FHA domain-containing protein Tfu_3061 3576242 - 3576721 + | FHA domain-containing protein Tfu_3062 3576718 - 3578142 + | protein phosphatase 2C-like Tfu_3063 3578139 - 3579581 + | FtsW/RodA/SpoVE family cell cycle protein Tfu_3064 3579578 - 3581026 + | peptidoglycan glycosyltransferase Tfu_3065 3581019 - 3582518 + | tyrosine protein kinase:Serine/threonine protein kinase Tfu_3066 3582563 - 3584359 + | serine/threonine protein kinase Tfu_3067 3584616 - 3584777 + | hypothetical protein Tfu_3068 3585872 - 3584976 - | rhomboid family protein Tfu_3069 3586407 - 3585883 - | peptidylprolyl isomerase Tfu_3070 3586671 - 3587234 + | hypothetical protein TERM 2241 3587253 - 3587297 + T 100 -28.7 -2.54896 | opp_overlap 3587235 3587260, overlap 3587260 CCGTCCCTGTGTCGT CCACGAACGCTGGGCCCCGCA CGA TGCGGGGCCCAGCGTTCGTAC TGCCTTCACTGAAGC TERM 2242 3587290 - 3587260 - T 100 -28.4 -3.14132 | opp_overlap 3587253 3587260, overlap 3587235 TGTGTCGTCCACGAA CGCTGGGCCCCGCA CGA TGCGGGGCCCAGCG TTCGTACTGCCTTCA TERM 2243 3587260 - 3587290 + T 100 -28.4 -3.2327 | opp_overlap 3587235 3587260, overlap 3587253 TGTGTCGTCCACGAA CGCTGGGCCCCGCA CGA TGCGGGGCCCAGCG TTCGTACTGCCTTCA Tfu_3071 3587863 - 3587303 - | hypothetical protein TERM 2244 3588470 - 3588447 - R 91 -16.8 -3.65425 | opp_overlap 3588442 3588442 CCTAGACATGCGAAA CGGAGACCTC CGGG GAGGTCTCCG TCCCAGTTCTGATCT Tfu_3072 3588835 - 3588707 - | hypothetical protein Tfu_3073 3589062 - 3589451 + | hypothetical protein Tfu_3074 3589733 - 3590041 + | hypothetical protein TERM 2245 3590701 - 3590672 - f 100 -22.3 -4.57474 | opp_overlap 3590664 TTAACGCAGAGAAAA GTGGGGGTGGAAC GGTT GTTCCACCCCCAC TCACACATGTGTACG TERM 2246 3592036 - 3592047 + F 74 -2.2 -4.7254 | CGTCTTACGACTTCG CACG GACC TGTG TTTTTAGTAAACAGT TERM 2247 3596544 - 3596489 - f 75 -10.5 -3.81741 | AAGCCAGAACGGAAA TTCGCCGCCAGTTCTTCGCGGCACA GTGAAT TATGCCAGAAAGAATCGGCGCCGAA GACCATTGGGAGGTG Tfu_3075 3596978 - 3598498 + | putative phytoene desaturase Tfu_3076 3598495 - 3599487 + | phytoene synthase Tfu_3077 3599490 - 3600494 + | putative methylesterase TERM 2248 3600502 - 3600556 + T 93 -19.4 -2.8664 | gap 3 CGTCCTGACCCGGTC TGGCCGGCCACGGCTCG--CCCT-GGC GCAC GCCGAGGGGACGGGCCGTGGCCGGCGG TGTCATCCTTCGATC Tfu_3078 3601851 - 3600559 - | dyp-type peroxidase Tfu_3079 3602427 - 3601870 - | hypothetical protein TERM 2249 3602206 - 3602236 + g 74 -14.6 -3.08679 | GTAGCCGGCGGTCAT CGACGGGTTGGCGG GTT CCGCCAGCCAGGCG TCTTCGATAACGAGG Tfu_3080 3603396 - 3602464 - | hypothetical protein Tfu_3081 3604073 - 3603495 - | hypothetical protein Tfu_3082 3604182 - 3604457 + | hypothetical protein Tfu_3083 3604770 - 3605366 + | rhodanese-like protein Tfu_3084 3605369 - 3606154 + | membrane permease protein Tfu_3085 3606200 - 3607579 + | rhodanese-like protein TERM 2250 3607697 - 3607745 + F 100 -16.7 -5.00616 | gap 1, overlap 3607704 GCCTGCCGTGCCCGG GCGGC-CTCCCCGGAGACGGCG TCCCAC CGCTGTCTCCGGGGTTTGCTGC TTTTTTGCCGCAGCC TERM 2251 3607704 - 3607737 + F 100 -21.8 -3.98747 | overlap 3607697 GTGCCCGGGCGGCCT CCCCGGAGACGGCG TCCCAC CGCTGTCTCCGGGG TTTGCTGCTTTTTTG Tfu_3086 3607818 - 3608399 + | hypothetical protein Tfu_3087 3608676 - 3608458 - | hypothetical protein Tfu_3088 3609973 - 3608792 - | putative lycopene cyclase TERM 2252 3609010 - 3608972 - G 74 -13.1 -3.61715 | overlap 3608959 CAGGGTGGCGAAGAA CTCCGCGCCGTCGACCA CCCCC TCGTCGAGGCCGCGGAG CAGCACCGCGTCGAA TERM 2253 3609064 - 3609029 - G 81 -7.5 -4.57073 | gap 1, overlap 3609056 CACCGCGTCGAAAAA CCGGT-GGCGAGCCGG GTACG CCGAATAGCCGACCGG AAACCGACCCGCCAC TERM 2254 3609484 - 3609453 - G 86 -14.4 -3.85389 | GCGGAAGAATCGAAA CGGGGCCGGTCAGT GCGG ACGAACCAGCCCCG GAAATGCTGCAGCAG Tfu_3089 3610063 - 3610788 + | putative methyltransferase Tfu_3090 3610785 - 3612347 + | putative beta-carotene desaturase/methylase Tfu_3091 3612408 - 3613763 + | multi anti extrusion protein MatE TERM 2255 3613895 - 3613870 - T 93 -18.3 -3.46602 | GTCCGCACAGCAGAA GGCCCCGATGC ACCA GCACCGGGGCC TGGCAACGACTCGGA rplI 3614366 - 3613920 - | 50S ribosomal protein L9 rpsR 3614629 - 3614393 - | 30S ribosomal protein S18 Tfu_3094 3615239 - 3614691 - | single-strand DNA-binding protein rpsF 3615579 - 3615289 - | 30S ribosomal protein S6 Tfu_3096 3617070 - 3615700 - | putative integral membrane protein Tfu_3097 3619952 - 3617067 - | putative penicillin-binding protein TERM 2256 3620431 - 3620417 - H 85 -7.8 -4.59853 | opp_overlap 3620417 CGAATCGCCGAAAAA CCCGAC AGC ATCGGG TTTTCCGCCTCACCT Tfu_3098 3620624 - 3621187 + | PadR family transcriptional regulator Tfu_3099 3621282 - 3622361 + | myo-inositol-1-phosphate synthase TERM 2257 3622382 - 3622407 + F 100 -19.7 -4.06993 | ACGGCCTACCGCACA CGCCGGGGCGG ACGC CTGCCCCGGCG TTCTTTCGTGTATGG Tfu_3100 3622650 - 3623336 + | hypothetical protein Tfu_3101 3623356 - 3624657 + | hypothetical protein Tfu_3102 3626361 - 3624703 - | metal-dependent phosphohydrolase Tfu_3103 3626510 - 3629017 + | hypothetical protein Tfu_3104 3628986 - 3630869 + | virulence factor MVIN-like Tfu_3105 3631413 - 3632930 + | hypothetical protein Tfu_3106 3632936 - 3633556 + | RNA polymerase sigma factor SigM Tfu_3107 3633553 - 3634401 + | hypothetical protein Tfu_3108 3634581 - 3635513 + | thioredoxin reductase Tfu_3109 3635579 - 3635902 + | thioredoxin Tfu_3110 3636926 - 3636039 - | chromosome segregation DNA-binding protein Tfu_3111 3638067 - 3637030 - | chromosome segregation ATPase gidB 3638788 - 3638075 - | glucose-inhibited division protein B TERM 2258 3639033 - 3638994 - R 100 -28.2 -5.75342 | opp_overlap 3638986 CTCCCCTAAAAAAAA TCGGGTGCTGCATGTTTC ACGT GAAACATGCAGCACCCGA TCTGGAGGTGCTATG Tfu_3113 3639590 - 3639051 - | single-stranded nucleic acid binding R3H TERM 2259 3639349 - 3639319 - G 70 -14.8 -2.79321 | overlap 3639316 3639314 TGCACAGCAAGACGA GTGAGCTCCTGGAG CGC CTCCAGAACCTCAC CACGCTCTCCCACCA Tfu_3114 3640643 - 3639717 - | hypothetical protein Tfu_3115 3640986 - 3640669 - | hypothetical protein Tfu_3116 3641426 - 3640983 - | ribonuclease P protein TERM 2260 3641496 - 3641450 - R 74 -11.1 -3.63341 | gap 3, opp_overlap 3641450 3641450, overlap 3641452 3641456 AACACCCTCGAACAA CA-GCAATCGGACCGGT-TGCC TAAGCG GGCAGACCGGTCCG-TTGCACG TTTGACTGCTGACGC TERM 2261 3641493 - 3641452 - R 88 -16.1 -3.39288 | opp_overlap 3641450 3641450, overlap 3641450 3641456 CACCCTCGAACAACA GCAATCGGACCGGT-TGCC TAAGCG GGCAGACCGGTCCG-TTGC ACGTTTGACTGCTGA TERM 2262 3641490 - 3641456 - R 75 -12.2 -3.46509 | gap 1, opp_overlap 3641450 3641450, overlap 3641452 3641450 CTCGAACAACAGCAA TCGGACCGGT-TGCC TAAGCG GGCAGACCGGTCCGT TGCACGTTTGACTGC rpmH 3641655 - 3641512 - | 50S ribosomal protein L34