TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.416525 %AT, 1590789 nt, 10004 terms. Intergenic: 0.473707 %AT, H2T: 148343 nt, 1031 terms; T2T: 45030 nt, 605 terms; H2H: 65655 nt, 1021 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|119709757|ref|NC_008696.1| Thermofilum pendens Hrk 5 plasmid pTPEN01, complete sequence (length 31504) Tpen_1840 1714 - 47 - | hypothetical protein Tpen_1841 2074 - 1778 - | hypothetical protein Tpen_1842 3015 - 2071 - | abortive infection protein TERM 1 2643 - 2629 - G 79 -12.8 -3.23692 | TAGGACGACTATGAA GGCGGC GAA GCCGCC TATCACTCCGCGGGC Tpen_1843 3572 - 3012 - | hypothetical protein Tpen_1844 3803 - 3585 - | hypothetical protein Tpen_1845 4214 - 3846 - | hypothetical protein Tpen_1846 4677 - 4306 - | hypothetical protein Tpen_1847 5063 - 4677 - | hypothetical protein TERM 2 5194 - 5211 + r 70 -9.9 -3.14051 | opp_overlap 5194, overlap 5192 CGTTGACGGGGAAAA GCCACAA AATT TTGTGGC TATTCGTAGACCTCG TERM 3 5211 - 5194 - R 83 -9.9 -4.11216 | opp_overlap 5192 5194 CGTTGACGGGGAAAA GCCACAA AATT TTGTGGC TATTCGTAGACCTCG Tpen_1848 5609 - 5211 - | hypothetical protein TERM 4 5651 - 5638 - R 88 -5.3 -5.31275 | GTTGAGGAGAAAAAA CACAA AATT TTGTG GCTATCGTTTTCTCT Tpen_1849 5995 - 5762 - | hypothetical protein Tpen_1850 6356 - 6000 - | hypothetical protein TERM 5 6471 - 6421 - R 91 -11 -4.16205 | GAGAATTAAAGGAAA GGGGAGCCGTACTCCACACCGTCC TCG GAGCGGTGTGGACTGCTACTCCGC GAAAAAGGCTACAAA TERM 6 6479 - 6496 + r 70 -6.3 -4.21908 | opp_overlap 6479 TACTCCGCGAAAAAG GCTACAA AATT TTGTGGC TTTTCACTCCTCCTC Tpen_1851 6697 - 6500 - | hypothetical protein Tpen_1852 7586 - 6813 - | hypothetical protein TERM 7 7705 - 7744 + r 82 -2 -5.45802 | opp_overlap 7690 GACAGCGCCTCTGCG CGCCAGTTTTCGCCACAA AATT TTGTGGCTAATCCTCCCG TTTTTCTTTTCACGG Tpen_1853 8768 - 8070 - | hypothetical protein TERM 8 8924 - 8912 - H 90 -7.7 -4.82901 | opp_overlap 8912 8911 8902, overlap 8914 TTCTTCTCATAAAAA GCGTT TTT AACGC ATTTTGCGCGTTTAG TERM 9 9241 - 9224 - g 72 -5.5 -4.48987 | CCCTGAGAACGAAAA GCCACAA AATT TTGAGGC TAATCCGCCGCCATC Tpen_1854 8952 - 9350 + | hypothetical protein TERM 10 9380 - 9402 + F 74 -2 -5.03145 | overlap 9381 9382 CCTTGAGTGTTTGGA TTGTCTTTTC AGC GAAAAAACGG TTTTTTAACGGCTTG Tpen_1855 9482 - 9862 + | hypothetical protein Tpen_1856 9859 - 10311 + | hypothetical protein Tpen_1857 10818 - 12032 + | hypothetical protein Tpen_1858 12044 - 12730 + | hypothetical protein Tpen_1859 12776 - 13279 + | hypothetical protein Tpen_1860 13276 - 13575 + | hypothetical protein Tpen_1861 13556 - 13774 + | hypothetical protein Tpen_1862 13806 - 14255 + | hypothetical protein TERM 11 14342 - 14322 - g 75 -4 -4.75289 | GAGCATAAGAGAAAA CGTCGT TATAAAGGT ACGACG TCTAAAGGATTTCGT Tpen_1863 14305 - 14574 + | hypothetical protein Tpen_1864 14580 - 14876 + | hypothetical protein TERM 12 14940 - 14960 + G 75 -5.4 -4.68103 | TCGTCTACACGGTGA GGCTGG CGGTCAAGC CCAGCC TTTTATTCCCCTTCG Tpen_1865 14866 - 15402 + | hypothetical protein TERM 13 15407 - 15422 + F 71 -3.2 -4.87665 | opp_overlap 15407, overlap 15397 CTCTACCTTAAAATA GGGG TTTTTTCT CCCC TTTTTCTCGATGGGC Tpen_1866 15432 - 17306 + | hypothetical protein Tpen_1867 17355 - 17555 + | hypothetical protein Tpen_1868 17555 - 17845 + | hypothetical protein Tpen_1869 17859 - 18299 + | hypothetical protein Tpen_1870 18301 - 18462 + | hypothetical protein Tpen_1871 18707 - 18459 - | hypothetical protein TERM 14 18766 - 18740 - R 70 -6.7 -4.07885 | gap 1, overlap 18743 GAGGGGGCTTTAAAA TATTCCTCGGGA AAAG CCCCGAG-AATA TGAGGGGTCTACCTC TERM 15 18842 - 18826 - R 76 -7.9 -4.16943 | overlap 18837 GGGTATAGCCCAAAA GCCCCGT AAG AGGGGGC TAGCCCTCGGACCGA Tpen_1872 19323 - 18892 - | hypothetical protein Tpen_1873 19532 - 19362 - | hypothetical protein TERM 16 19986 - 19970 - R 70 -5.8 -4.16943 | opp_overlap 19970 19972 GGGTATAGCCCAAAA GCCCCT AGAAA AAGGGC TATTTCCTGGGCTTC Tpen_1874 20183 - 19986 - | hypothetical protein Tpen_1875 22081 - 20180 - | DEAD/DEAH box helicase domain-containing protein TERM 17 22225 - 22188 - R 100 -18.7 -3.21218 | opp_overlap 22188 ATCGCCTATTAGCAA TGGCTATAGCCAATAGC AGTA GCCATTAGCTATAGCCA TTAAGCATTAGAAAA TERM 18 22263 - 22242 - R 83 -5.9 -4.94902 | overlap 22244 TAAGCATTAGAAAAA GAGTCGAAT CGCA ATTCGACTA AAGGCTATTAGCCCA TERM 19 22261 - 22244 - R 77 -8.5 -4.08644 | overlap 22242 AGCATTAGAAAAAGA GTCGAAT CGCA ATTCGAC TAAAGGCTATTAGCC TERM 20 22427 - 22448 + r 70 -10.3 -3.1855 | opp_overlap 22424 22421 22436 AAGAGTAAACGACTA TAGGCTAAA GCTC TTTAGCCTA TTGGCTATTAGCCCA TERM 21 22518 - 22468 - R 100 -14.8 -4.63527 | opp_overlap 22449 22466 22489, overlap 22436 CTATTAGCCCAAAAA CGAATAGCCATTCGACTATAGGCT ATT AGCCCATTGGCTAAAGGCTATTCG ACTCTTACGCTATTA TERM 22 22842 - 22857 + r 79 -2.4 -5.2696 | opp_overlap 22842 22845, overlap 22844 22845 ACCGATAAAACGAAA CAGGGG AAGC CTCCCG TTTTTTCCCTTTTCG Tpen_1876 23532 - 23125 - | hypothetical protein TERM 23 23639 - 23624 - R 82 -7.6 -4.58395 | opp_overlap 23623 GCTAGCCGCGAAAAA CCACAA AATT TTGTGG CTATTCAGCGCGACG Tpen_1877 24191 - 23724 - | hypothetical protein TERM 24 24351 - 24335 - R 72 -10.9 -3.02144 | overlap 24341 24342 TCACGCGGTTCAACA CCGAAAC CCT GTTTCGG TCCGAAACTAGAAAA TERM 25 24424 - 24398 - R 100 -3 -5.72616 | AGCGAGAGAAAAAAA GAGTAATTTTAG GGG CTAATACTCCTC GTCCTCCCAGTCCTC Tpen_1878 24997 - 24413 - | hypothetical protein Tpen_1879 25800 - 25066 - | hypothetical protein Tpen_1880 26111 - 25827 - | hypothetical protein TERM 26 26556 - 26511 - g 73 -11.1 -3.45324 | gap 1, overlap 26509 26512 26519 CATGGCTATCAAAGA CCCAGAGAGGCGTAACAAGGAC GTA GTCCTAGACACGCCCCTC-GGT AGCTACACGTGCACC TERM 27 26555 - 26512 - g 78 -14.6 -2.66873 | gap 1, overlap 26511 26509 26519 ATGGCTATCAAAGAC CCAGAGAGGCGTAACAAGGAC GTA GTCCTAGACACGCCCCTC-GG TAGCTACACGTGCAC TERM 28 26549 - 26519 - g 71 -11.8 -2.96638 | overlap 26512 26511 26509 TCAAAGACCCAGAGA GGCGTAACAAGGAC GTA GTCCTAGACACGCC CCTCGGTAGCTACAC Tpen_1881 26218 - 26727 + | hypothetical protein Tpen_1882 26943 - 26746 - | hypothetical protein Tpen_1883 27542 - 26940 - | hypothetical protein Tpen_1884 27809 - 27627 - | hypothetical protein Tpen_1885 28041 - 27844 - | hypothetical protein Tpen_1886 28309 - 28094 - | hypothetical protein Tpen_1887 28378 - 28872 + | hypothetical protein Tpen_1888 29591 - 28869 - | hypothetical protein TERM 29 28975 - 28992 + g 78 -9.9 -4.07568 | CCCCCCTCGGGATTA GCCACAA AATT TTGTGGC TTTTCGCGGGGGAGC Tpen_1889 30157 - 29696 - | hypothetical protein Tpen_1890 30653 - 30135 - | hypothetical protein Tpen_1891 31498 - 30662 - | phage integrase family protein SEQUENCE gi|119718918|ref|NC_008698.1| Thermofilum pendens Hrk 5, complete genome (length 1781889) Tpen_0001 30 - 881 + | phosphoesterase, PA-phosphatase related Tpen_0002 1984 - 887 - | cellulase Tpen_0003 2136 - 3023 + | 2-acetyl-1-alkylglycerophosph ocholine esterase Tpen_0004 3025 - 4311 + | major facilitator transporter Tpen_0005 5123 - 4314 - | ABC transporter related Tpen_0006 5941 - 5120 - | ABC transporter related Tpen_0007 6714 - 5938 - | cobalt transport protein Tpen_0008 7313 - 6756 - | hypothetical protein Tpen_0009 9167 - 7764 - | transglutaminase domain-containing protein Tpen_0010 9259 - 9918 + | adenylate kinases Tpen_0011 9958 - 10458 + | hypothetical protein TERM 1 10655 - 10598 - T 71 -9.1 -3.53444 | gap 1, opp_overlap 10598 10599 10601, overlap 10638 CCATCGCGCTCTAAA TGGGGAGTATTTCCTCGTCTTCCTCGTC CAT GACGAAGAGGTGGAGG-AAGGCCCCCCA TATGAGCACGTTTTT Tpen_0012 11075 - 10593 - | hypothetical protein TERM 2 12326 - 12312 - g 79 -5.6 -4.84492 | overlap 12317 12324 GGAAGCATAAGAAAA GAGCAC GAA GAGCTC GCCGCCGTGTACGGC TERM 3 12555 - 12544 - g 71 -7.2 -4.12198 | opp_overlap 12549 12552, overlap 12534 GAGAAGCCGGGAAAA CCGC GCTG GCGG CACTCTTCTTGTCGC Tpen_0013 11154 - 12647 + | binding-protein-dependent transport systems inner membrane component Tpen_0014 12649 - 13386 + | ABC transporter related TERM 4 13599 - 13587 - T 81 -9.1 -4.02817 | GGGGCACAAGAATAA GGGGT AGG ACCCC CGGGGAAGCGGTGCC Tpen_0015 14094 - 13738 - | hypothetical protein Tpen_0016 14903 - 14127 - | hypothetical protein Tpen_0017 15331 - 14900 - | nucleoside 2-deoxyribosyltransferase Tpen_0018 15887 - 15375 - | AsnC family transcriptional regulator Tpen_0019 16618 - 15929 - | hypothetical protein TERM 5 16192 - 16176 - G 76 -4.4 -4.77567 | overlap 16180 AGCGGCACAACAAAA GAGACG TAGAG CATCTC CTCTCCGCTCTCCAA Tpen_0020 16728 - 16955 + | hypothetical protein Tpen_0022 18203 - 17592 - | hypothetical protein Tpen_0021 16955 - 17656 + | HAD family hydrolase Tpen_0023 18681 - 18184 - | hypothetical protein TERM 6 18658 - 18689 + g 70 -3.8 -4.69664 | overlap 18664 GCTCTTCTCTCCAGA CACGCATATTGGAT TCTT ATCCAATATTTATG TTTTTCCCTAGTCTC TERM 7 18664 - 18683 + g 83 -8 -4.56791 | overlap 18658 CTCTCCAGACACGCA TATTGGAT TCTT ATCCAATA TTTATGTTTTTCCCT Tpen_0024 19213 - 18674 - | hypothetical protein Tpen_0025 19495 - 19238 - | hypothetical protein Tpen_0026 20814 - 19513 - | hypothetical protein TERM 8 20411 - 20397 - G 80 -9.2 -4.13945 | overlap 20405 20406 ACTGGTACGTGAAAA CGGGAG AAG CCCCCG CGGAGGAAGCCATGT TERM 9 20699 - 20734 + g 79 -12.6 -3.34398 | gap 1, overlap 20698 GTAGGCTGGCAGGAC GGCTGCGGCTGCTGG ACGCTTC CCGGCGG-CGCAGCC TGTTTCAGCAAGAGG TERM 10 20936 - 20923 - H 76 -3.7 -5.01732 | opp_overlap 20922 20927 AAGCTTGGGAAAAAA CGCGG GTAC CCGTG CCTTCGTTTGGAGGT Tpen_0027 21018 - 22220 + | alanine aminotransferase TERM 11 22224 - 22241 + T 73 -4.1 -4.7889 | gap 1, overlap 22237 GCCGGGAGCTAGGGC GCTACGGG TAC TCCG-AGC TTTTTCGCTATTTCT Tpen_0028 22636 - 22217 - | PilT domain-containing protein Tpen_0029 22920 - 22624 - | hypothetical protein TERM 12 22981 - 22966 - H 70 -4.6 -4.4767 | CCATCGAGGAGAAAA CCTTCG TGCG CGACGG CGTCAGGTTCTCGCT Tpen_0030 22971 - 23333 + | hypothetical protein Tpen_0031 23511 - 24437 + | NAD-dependent epimerase/dehydratase Tpen_0032 24418 - 24918 + | metallopeptidase-like Tpen_0033 24935 - 25309 + | hypothetical protein Tpen_0034 25722 - 25306 - | hypothetical protein Tpen_0035 26838 - 25762 - | hypothetical protein Tpen_0036 26954 - 27238 + | hypothetical protein Tpen_0037 27229 - 27654 + | hypothetical protein Tpen_0038 27657 - 28199 + | putative adenylyl cyclase CyaB Tpen_0039 28614 - 28180 - | hypothetical protein Tpen_0040 28685 - 29707 + | glucose-inhibited division protein A Tpen_0041 30792 - 29704 - | radical SAM domain-containing protein Tpen_0042 31857 - 30844 - | dual specificity protein phosphatase TERM 13 31162 - 31177 + g 82 -10.4 -4.1891 | GTCGACGTCGCAGAC CCCCCT TAGG AGGGGG TTTCTCTTAACCCAC TERM 14 33224 - 33209 - g 75 -5.4 -4.56597 | TGCCGCCGGTAAAAA CGTAGA AATA TCCACG AGCCCCTTCGGCGGT Tpen_0043 31935 - 33326 + | peptidase U62, modulator of DNA gyrase Tpen_0044 33323 - 34651 + | peptidase U62, modulator of DNA gyrase Tpen_0045 35494 - 34661 - | hypothetical protein Tpen_0046 36461 - 35568 - | hypothetical protein TERM 15 36726 - 36753 + G 79 -13.4 -3.14564 | opp_overlap 36723 TCCGTCGAGACACCG CTCGGACGCAGG GCTC CCTGCGTCAGGG TTACTGGAAAACTGG Tpen_0047 36543 - 37196 + | phosphoribosyltransferase Tpen_0048 37222 - 37554 + | Fis family transcriptional regulator TERM 16 37542 - 37564 + F 81 -9 -4.03978 | GAGGCTTGTAGCCGA GCTCGCAGGG TAG CCCCGCGACC TTTATATACGAGCTT Tpen_0049 37596 - 37829 + | hypothetical protein Tpen_0050 37810 - 38232 + | hypothetical protein Tpen_0051 38357 - 39124 + | hypothetical protein Tpen_0052 39217 - 39618 + | hypothetical protein Tpen_0053 40943 - 39606 - | amino acid permease-associated region TERM 17 40790 - 40777 - G 91 -8.1 -5.06414 | TCCGCGTAAGAAAAA GCCGT CGCA ACGGC TATGACGCCGGAGAA Tpen_0054 41369 - 40977 - | hypothetical protein TERM 18 41334 - 41310 - G 78 -3.6 -4.98616 | gap 1, overlap 41312 CGAAAACACGAAAAA CACGC-AGGTA AATA TACCTAGCGCA CAGAAAGAAAAGAAC Tpen_0055 41985 - 41509 - | hypothetical protein TERM 19 41950 - 41963 + g 83 -9.5 -4.30995 | overlap 41947 GACCGTTGCTATCAC GGGGC TGAT GCCCC TTCTTTTCTGCGCCG Tpen_0056 42597 - 42190 - | hypothetical protein TERM 20 42695 - 42665 - H 85 -12 -3.63515 | opp_overlap 42664 42665, overlap 42666 GGCCACGGGCAACAA CCCCCTCGAAAAAA CAG TTTTTTCGAGGCGA ATTTAGCCCCCTCAA TERM 21 42694 - 42666 - H 81 -13.3 -2.77895 | opp_overlap 42665 42664, overlap 42665 GCCACGGGCAACAAC CCCCTCGAAAAAA CAG TTTTTTCGAGGCG AATTTAGCCCCCTCA Tpen_0057 42798 - 42929 + | hypothetical protein Tpen_0058 43756 - 42992 - | thioredoxin/glutaredoxin-like TERM 22 43458 - 43444 - G 72 -9.2 -3.64703 | overlap 43426 CTCCGGCGACGTAAA CCGCGG ACG CCACGG TGAGGGAGTAGTAGA Tpen_0059 44153 - 45499 + | amidohydrolase Tpen_0060 45522 - 46241 + | purine phosphorylases family protein 1 TERM 23 46444 - 46494 + G 73 -12.5 -2.77895 | gap 1, opp_overlap 46434 46431, overlap 46443 CAGGATCCCCGGGTT CACCCGGGTGCCGCGAGGCTCCAC AGTC GTGGA-CCTCGGGGCATACGTGGG CTTCTTCAGCGTAAA Tpen_0061 46241 - 47020 + | FkbM family methyltransferase Tpen_0062 47105 - 47818 + | purine phosphorylases family protein 1 TERM 24 48217 - 48204 - g 87 -8.1 -4.72986 | GAGGTTGATGAAAAA GCCGT GAAG ACGGC GCGGTACCTGTCTAG Tpen_0063 47832 - 48263 + | hypothetical protein Tpen_0064 48287 - 48808 + | hypothetical protein Tpen_0065 48840 - 49646 + | hypothetical protein Tpen_0066 50323 - 49607 - | cobalt transport protein Tpen_0067 51893 - 50307 - | ABC transporter related TERM 25 51660 - 51675 + g 75 -5.4 -4.56597 | gap 1, overlap 51651 51660 AGCCATCCCGAGGAG CCCC-TC CTC GACGGGG TTTTTACCCCCCACG Tpen_0068 52473 - 51871 - | ABC transporter, permease protein Tpen_0069 52657 - 53619 + | phosphomethylpyrimidine kinase Tpen_0070 53689 - 54753 + | transcriptional regulator, TrmB Tpen_0071 56405 - 54750 - | radical SAM domain-containing protein Tpen_0072 56833 - 56507 - | hypothetical protein Tpen_0073 57920 - 56850 - | radical SAM domain-containing protein TERM 26 57791 - 57768 - G 75 -11.8 -3.28712 | gap 1, opp_overlap 57759 57758, overlap 57749 57750 TTCTCCTCCGTAGAA CGCGACGATAG AGT CT-TCGTCGCG TTCAACCAACTTCTT Tpen_0074 58676 - 57954 - | hypothetical protein TERM 27 58260 - 58246 - G 70 -4.9 -4.54047 | opp_overlap 58251 CCAGCCCAGAGAAAA CGGGC CCCGT ACCCG GGTATTGCTAGCTGG Tpen_0075 58985 - 58722 - | hypothetical protein Tpen_0076 59056 - 59916 + | 6-phosphogluconate dehydrogenase, NAD-binding Tpen_0077 60965 - 59913 - | hypothetical protein Tpen_0078 61805 - 60972 - | hypothetical protein Tpen_0079 62611 - 61805 - | hypothetical protein TERM 28 61917 - 61937 + g 74 -11.1 -3.53012 | opp_overlap 61903 61902, overlap 61903 61919 TCGGAGACCTTTACG CTGGGTGCT TCG AGCACCCTG TTTACAAAGCCGCCG TERM 29 61919 - 61935 + g 76 -12.3 -3.34398 | opp_overlap 61903 61902, overlap 61917 61903 GGAGACCTTTACGCT GGGTGCT TCG AGCACCC TGTTTACAAAGCCGC TERM 30 62485 - 62504 + g 77 -10.6 -3.79906 | opp_overlap 62481 62480 CATGTTGAAAGGCTA CCCCCGCG AGCC CGAGGGGG TTGTTCTGAGCCTCC Tpen_0080 63123 - 62608 - | small GTP-binding protein TERM 31 62802 - 62822 + g 73 -3.3 -4.86001 | gap 1, opp_overlap 62787, overlap 62804 GTATGCTGGGGACTT TC-CCGAG TACACT CTCGGTGA TTTTTCTCCACTCGT Tpen_0081 64388 - 63192 - | aminotransferase, class I and II TERM 32 63694 - 63676 - G 75 -5.2 -4.57341 | overlap 63663 63692 AAGGTCTTCGAAAAA CCGTTCAC GTA GTAGACGG CGTCGCGCCAACTCG TERM 33 64352 - 64327 - G 87 -9.7 -4.57474 | gap 1, opp_overlap 64325 64343 GCAAGGTAGACAAAA GCCTCCTCTGCT CCT AGCTG-GGAGGC GGCTTTACTTAGGCG TERM 34 64765 - 64755 - gR 76 -6.8 -4.42788 | TTCAACTTGAGAAAA GCGT TCT ACGC CACGCTTTCAAGAGA Tpen_0083 65332 - 64964 - | hypothetical protein Tpen_0082 64539 - 65021 + | hypothetical protein Tpen_0084 65488 - 65354 - | hypothetical protein Tpen_0085 65641 - 67482 + | D-fructose-6-phosphate amidotransferase Tpen_0086 67524 - 68657 + | sugar-phosphate nucleotidyl transferase TERM 35 68912 - 68928 + G 75 -4.3 -4.82901 | overlap 68897 68913 GGCGATCTCGCTGAG CCAGGGC GAC GTCCTGA TTTTTCTCGACAACG Tpen_0087 68664 - 69788 + | glycosyl transferase family protein Tpen_0088 70297 - 69803 - | hypothetical protein Tpen_0089 70656 - 70492 - | hypothetical protein Tpen_0090 70840 - 71190 + | helix-turn-helix domain-containing protein Tpen_0091 72589 - 71159 - | 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases-like TERM 36 72310 - 72351 + g 87 -12.9 -3.80893 | GCTTGTCCGTTGGTT GCGCGGCTGGGGTGCTCAA CAGG TGGAGCACTCGGGCCGCCC TTTCGATTATACGCT Tpen_0092 73013 - 72603 - | hypothetical protein TERM 37 72905 - 72918 + g 75 -3.7 -4.83169 | TAAGCTCCAGCCTGT CCGCG TTCT CGAGG TTTTTCTCGACAGCT Tpen_0093 74619 - 73057 - | putative thymidine phosphorylase Tpen_0094 74694 - 76538 + | aldehyde ferredoxin oxidoreductase Tpen_0095 76541 - 76771 + | thiamineS protein Tpen_0096 76839 - 77237 + | hypothetical protein Tpen_0097 77227 - 77649 + | hypothetical protein Tpen_0098 78292 - 77609 - | hypothetical protein Tpen_0099 78747 - 78346 - | hypothetical protein Tpen_0100 78832 - 79392 + | peptidase, zinc-dependent Tpen_0101 80129 - 79398 - | 5-formyltetrahydrofolate cyclo-ligase Tpen_0102 80302 - 80550 + | CopG family transcriptional regulator Tpen_0103 80914 - 80567 - | methionyl-tRNA synthetase, beta subunit Tpen_0104 81045 - 81347 + | hypothetical protein Tpen_0105 81360 - 81926 + | isochorismatase hydrolase Tpen_0106 82816 - 81929 - | phage integrase family protein Tpen_0107 83285 - 82818 - | hypothetical protein TERM 38 83120 - 83130 + g 71 -6.8 -4.18058 | GAGCGCTTTGAATCG CGAG CCC CTCG TTTTCCCCTATGATT Tpen_0108 83941 - 83282 - | hypothetical protein Tpen_0109 84991 - 84299 - | hypothetical protein Tpen_0110 86218 - 84998 - | DegT/DnrJ/EryC1/StrS aminotransferase Tpen_0111 87076 - 86273 - | metal dependent phosphohydrolase Tpen_0112 88485 - 87169 - | phosphopyruvate hydratase Tpen_0114 90499 - 89300 - | FAD dependent oxidoreductase Tpen_0113 88618 - 89382 + | nucleotidyl transferase TERM 39 89798 - 89809 + gT 72 -7.2 -4.19336 | GGTGAGAGCCTTTAA GGGG TTAG CCCC TTTCTTCACGTAGTT Tpen_0115 90874 - 90518 - | PadR-like family transcriptional regulator Tpen_0116 91565 - 90942 - | methyltransferase type 11 Tpen_0117 92496 - 91588 - | polyprenyl synthetase TERM 40 93304 - 93316 + G 90 -6.3 -5.22039 | opp_overlap 93304 ACGCAATTACGACAA GAAAC GCA GTTTC TTTTTTCGGTTTAGA Tpen_0118 92553 - 93383 + | TatD family hydrolase Tpen_0119 93423 - 94901 + | carbamoyl-phosphate synthase L chain, ATP-binding Tpen_0120 95812 - 94898 - | spermidine synthase TERM 41 96035 - 96024 - R 100 -4.4 -5.59357 | opp_overlap 96032 AGGATAGGAAAAAAA GAGA ATTC TCTC TAACCTTTTTGGAGA Tpen_0121 96937 - 96035 - | periplasmic solute binding protein TERM 42 97700 - 97681 - g 70 -4.2 -4.66938 | overlap 97682 97683 ATCTCGAAGAGAAAA CTCGTCGT AATG ACGACGCA CGACCCTGTACTAAC Tpen_0122 97111 - 97863 + | ABC transporter related Tpen_0123 97877 - 98677 + | ABC-3 protein Tpen_0124 98674 - 99066 + | CopG family transcriptional regulator Tpen_0125 99655 - 99047 - | hypothetical protein Tpen_0126 100380 - 99652 - | purine phosphorylases family protein 1 Tpen_0127 101042 - 100380 - | hypothetical protein TERM 43 100475 - 100507 + g 90 -7.5 -5.03314 | overlap 100476 GGAGCCCTCCCTTCC AGCTCGTCTTCCACG AGC CGAGGTTGACGAGCC TTTTTTCGCGGTCGA TERM 44 100476 - 100506 + g 74 -11 -3.61506 | overlap 100475 GAGCCCTCCCTTCCA GCTCGTCTTCCACG AGC CGAGGTTGACGAGC CTTTTTTCGCGGTCG Tpen_0128 101136 - 102635 + | hypothetical protein Tpen_0129 102910 - 102659 - | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein TERM 45 103070 - 103051 - H 70 -10.8 -2.73124 | opp_overlap 103050 103049, overlap 103050 GTTGACCCGCCAAAT TGCTTAGC CCGA GCTAAGCA CCTGTTTTTAGGTAT TERM 46 104736 - 104756 + G 76 -12.5 -3.05384 | overlap 104726 TGTGGCTCGACTCGG GGGTCGCGT TCT ACGCGTCCC TTGGCTACCCGAAGA Tpen_0130 103136 - 106324 + | isoleucyl-tRNA synthetase Tpen_0131 107033 - 106311 - | hypothetical protein Tpen_0132 107087 - 108820 + | membrane protein-like TERM 47 108970 - 108939 - g 79 -7.2 -4.68994 | opp_overlap 108947 108949 ATCAGCAGGCAAAAA GCCAAGAGGTGGCT TGCA AGCCTACTCTTCGC CACGGGTGTCGTGCT Tpen_0133 108825 - 110036 + | cytochrome c biogenesis protein, transmembrane region Tpen_0134 110300 - 110013 - | hypothetical protein Tpen_0135 111849 - 110293 - | Alpha-amylase Tpen_0136 112426 - 111893 - | inorganic diphosphatase Tpen_0137 114114 - 112540 - | elongation factor Tu domain-containing protein TERM 48 113070 - 113095 + g 75 -11.9 -3.28924 | overlap 113060 CGTATGTCTCGCTCA CGTAGGCGAGC AGAG GCTTGTCTACG TTCTCGGCCCACCTC Tpen_0138 114279 - 115442 + | hypothetical protein Tpen_0139 116027 - 115449 - | hypothetical protein dcd 116590 - 116075 - | deoxycytidine triphosphate deaminase Tpen_0141 117373 - 116663 - | HhH-GPD family protein Tpen_0142 117399 - 118154 + | stationary-phase survival protein SurE Tpen_0143 118183 - 119541 + | FAD-dependent pyridine nucleotide-disulphide oxidoreductase Tpen_0144 120095 - 119538 - | hypothetical protein Tpen_0145 121093 - 120098 - | oligopeptide/dipeptide ABC transporter, ATPase subunit Tpen_0146 122068 - 121100 - | oligopeptide/dipeptide ABC transporter, ATPase subunit Tpen_0147 123503 - 122079 - | binding-protein-dependent transport systems inner membrane component Tpen_0148 124579 - 123515 - | binding-protein-dependent transport systems inner membrane component TERM 49 124690 - 124702 + r 81 -4.9 -5.16681 | opp_overlap 124690, overlap 124685 CTTGCTAAAGAAAAA GAAAA ATT TTTTC TTTTATTGTTTTTGG TERM 50 124702 - 124690 - R 87 -4.9 -5.27335 | opp_overlap 124690 124685 CTTGCTAAAGAAAAA GAAAA ATT TTTTC TTTTATTGTTTTTGG TERM 51 124718 - 124728 + r 72 -4.6 -4.62054 | TTTTATTGTTTTTGG GCGG TTT CTGC TTTTGGTTTCCTTAA Tpen_0149 127392 - 124705 - | solute binding protein-like protein Tpen_0150 128058 - 127555 - | AsnC family transcriptional regulator Tpen_0151 129572 - 128154 - | hypothetical protein TERM 52 128982 - 128966 - G 76 -4.4 -4.82901 | opp_overlap 128966 128967, overlap 128967 GCCTGGCTACAAAAA CGTCTC CCTGC GAGACA TTGTACGCCCACGTC Tpen_0152 130232 - 129621 - | hypothetical protein Tpen_0153 131290 - 130229 - | phosphoadenosine phosphosulfate reductase Tpen_0154 131957 - 131313 - | hypothetical protein Tpen_0155 132346 - 132026 - | biotin/lipoyl attachment domain-containing protein Tpen_0156 134121 - 132580 - | carboxyl transferase Tpen_0157 134706 - 134140 - | hypothetical protein Tpen_0158 135958 - 134798 - | glycosyl transferase family protein TERM 53 136011 - 135991 - H 73 -3.9 -4.73432 | opp_overlap 135991 CGAAAGAGAAATAAA CTTTGCCGC GAC GCGCGAAAG CCTTTTTGCTCAGAC Tpen_0159 136045 - 136305 + | hypothetical protein Tpen_0160 136311 - 136763 + | methylated-DNA--protein-cysteine methyltransferase Tpen_0161 136774 - 137676 + | anion-transporting ATPase TERM 54 138290 - 138272 - g 70 -4.4 -4.55295 | opp_overlap 138278 138279, overlap 138273 CCTCGGAGAAAGAAA GGAGGCAC TGG GCGCGCCC CAGATTCTCGTTAAG Tpen_0162 137727 - 138626 + | hypothetical protein Tpen_0163 138744 - 138971 + | hypothetical protein Tpen_0164 138943 - 139902 + | ATPase Tpen_0165 139899 - 141131 + | hypothetical protein Tpen_0166 141136 - 141624 + | hypothetical protein Tpen_0167 142307 - 141621 - | adenylate kinases TERM 55 142333 - 142345 + H 86 -10.5 -3.97368 | opp_overlap 142320 GAGGGTGGCGCCGTA GGGCG ATC CGCCC TTTCTAGCTTCCCAG TERM 56 142812 - 142792 - g 73 -3.1 -4.82901 | opp_overlap 142794, overlap 142794 GGCCGTGGAGAAAAA GAGCCCGCG CGA CGTGGACTT TCAGGAAAAGACCCG TERM 57 143159 - 143142 - g 71 -6.9 -4.13767 | TTCTCGAGGCTAAAA GCCCGCC CGTC GACAGGC CCGTCGACGTCATAG Tpen_0168 142442 - 143887 + | peptidase U62, modulator of DNA gyrase Tpen_0169 143887 - 145224 + | peptidase U62, modulator of DNA gyrase Tpen_0170 146298 - 145207 - | hypothetical protein Tpen_0171 147322 - 146300 - | transglutaminase domain-containing protein Tpen_0172 148321 - 147398 - | carbamate kinase TERM 58 148364 - 148351 - R 93 -2.5 -5.65927 | overlap 148344 CATGTAAATAAAAAA TTTTT AACG AAAAA CATATACTGGCGACT Tpen_0173 148782 - 148453 - | ModE family transcriptional regulator Tpen_0174 149121 - 148786 - | MoaD family protein Tpen_0175 149133 - 150500 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Tpen_0176 152373 - 150517 - | aldehyde ferredoxin oxidoreductase Tpen_0177 152495 - 153514 + | cellulase Tpen_0178 154146 - 153520 - | molybdopterin-guanine dinucleotide biosynthesis protein TERM 59 153865 - 153853 - G 72 -9.1 -3.87815 | opp_overlap 153853 GGCTACGCCTAGAAA CTCGC TCC GCGAG TTTCTAAGAGCAGTG TERM 60 153853 - 153865 + g 72 -9.1 -3.86015 | opp_overlap 153853 GGCTACGCCTAGAAA CTCGC TCC GCGAG TTTCTAAGAGCAGTG Tpen_0179 154502 - 154143 - | hypothetical protein TERM 61 154549 - 154537 - R 100 -3.5 -5.95449 | opp_overlap 154537 AAATAAAATAAAAAA TAAAA ATG TTTTA GTTTACAGGAATGGC Tpen_0180 155925 - 154552 - | hydrogenase 4 subunit D Tpen_0181 156719 - 155982 - | NADH ubiquinone oxidoreductase, 20 kDa subunit Tpen_0182 157296 - 156712 - | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Tpen_0183 158990 - 157287 - | NADH dehydrogenase (ubiquinone), 30 kDa subunit Tpen_0184 160450 - 158987 - | NADH dehydrogenase (quinone) Tpen_0185 161922 - 160447 - | NADH dehydrogenase (quinone) Tpen_0186 162573 - 161935 - | NADH-ubiquinone oxidoreductase, chain 4L Tpen_0187 163515 - 162577 - | respiratory-chain NADH dehydrogenase, subunit 1 Tpen_0188 165725 - 163512 - | NADH dehydrogenase (quinone) TERM 62 165715 - 165704 - G 86 -3 -5.53288 | TGGAACCTAAAAAAA GAAA AATA TTTC CCTGCAACATACCAC Tpen_0189 166281 - 165739 - | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Tpen_0190 168345 - 166288 - | formate dehydrogenase, alpha subunit Tpen_0191 168513 - 169661 + | formate/nitrite transporter Tpen_0192 171271 - 169685 - | Fis family transcriptional regulator TERM 63 171448 - 171463 + G 70 -4.6 -4.42238 | ATGGAGAGACGGGTG GCTAGG TGGT CCCAGC TTTTCATTACAGTGC Tpen_0193 171433 - 171858 + | hypothetical protein Tpen_0194 172406 - 171837 - | hypothetical protein Tpen_0195 172486 - 173751 + | GTPase or GTP-binding protein Tpen_0196 174887 - 173781 - | hypothetical protein Tpen_0197 177744 - 175078 - | ATPase, P-type (transporting), HAD superfamily, subfamily IC Tpen_0198 178623 - 177850 - | hypothetical protein Tpen_0199 179647 - 178919 - | TatD-related deoxyribonuclease Tpen_0200 180516 - 179644 - | inositol-phosphate phosphatase TERM 64 179857 - 179814 - G 85 -11.6 -3.95324 | gap 1 TACCGCCAAGAACAA CGTAGGCGCCGGCCTCCCTGG CTA CCAGCGTCG-CGGCGGCTACG TCAACCACTCGCATT Tpen_0201 181032 - 180526 - | phosphodiesterase Tpen_0202 181103 - 181480 + | zinc finger SWIM domain-containing protein Tpen_0203 182581 - 181490 - | hypothetical protein TERM 65 183731 - 183718 - g 75 -3.8 -4.77036 | overlap 183720 TTCGACGAGGAAAAA GTCG TCAACG CGAC GCTGGACGGATTAGA Tpen_0204 182677 - 183984 + | amine oxidase Tpen_0205 183990 - 185009 + | glycosyl transferase family protein Tpen_0206 185095 - 185523 + | single-strand DNA-binding protein Tpen_0207 186937 - 185558 - | hydroxypyruvate reductase Tpen_0208 187076 - 188113 + | ornithine cyclodeaminase Tpen_0209 188718 - 188188 - | hypothetical protein Tpen_0210 190646 - 188817 - | glycoside hydrolase family protein TERM 66 190128 - 190118 - G 76 -3.2 -4.9792 | overlap 190122 TACCCGATAGAAAAA GCAA CCA CTGC TCCAGGAGCGACGGG Tpen_0211 190997 - 190722 - | DNA-binding protein Alba Tpen_0212 192907 - 191102 - | putative ATPase RIL Tpen_0213 193209 - 192928 - | DNA-directed RNA polymerase, M/15 kDa subunit Tpen_0214 193329 - 193901 + | THUMP domain-containing protein Tpen_0215 194420 - 193884 - | hypothetical protein Tpen_0216 194459 - 195250 + | hypothetical protein Tpen_0217 196309 - 195260 - | RNA-3'-phosphate cyclase Tpen_0218 196948 - 196349 - | CDP-alcohol phosphatidyltransferase Tpen_0219 197310 - 196954 - | ubiquitin-associated domain-containing protein Tpen_0220 198028 - 197294 - | hypothetical protein alaS 200748 - 198025 - | alanyl-tRNA synthetase rplP0 201686 - 200802 - | acidic ribosomal protein P0 TERM 67 201082 - 201097 + g 83 -4.7 -5.04597 | GGGGATACCACTTTG CCATC GAGGTA GATGG TTTTTATCTGTAACT Tpen_0223 202360 - 201683 - | ribosomal protein L1 TERM 68 202210 - 202223 + g 70 -3.7 -4.64766 | overlap 202188 CCACGACAGTGTTCA GCCTG TTCT CCGGC TTTTTAACGTCTACG Tpen_0224 202863 - 202357 - | ribosomal protein L11 rps19p 203304 - 202879 - | 30S ribosomal protein S19P TERM 69 203209 - 203233 + g 70 -4.9 -4.53705 | overlap 203207 203210 AAGGCTTCTCCTCTG CCTAGCCGGCA TTA TCTCGGCTAGC TTTTCTATCGGCATT Tpen_0226 203494 - 204669 + | FAD-dependent pyridine nucleotide-disulphide oxidoreductase TERM 70 204706 - 204722 + T 77 -5.8 -4.68209 | GATCTCTACTGGGTC GGAGTC CTGGA GGCTCC TTTCTTTCTTCCAGT rpl2p 205442 - 204696 - | 50S ribosomal protein L2P Tpen_0228 205727 - 205455 - | ribosomal protein L25/L23 rpl4lp 206527 - 205724 - | 50S ribosomal protein L4P rpl3p 207538 - 206534 - | 50S ribosomal protein L3P TERM 71 206702 - 206714 + g 85 -10.5 -4.27886 | CCCGTAGTGCGGCCA CCCGC CGG GCGGG TTTATCTCTTTGAGA TERM 72 207676 - 207664 - R 75 -4.7 -4.7871 | AACCACCAGGAAAAA GGCGC CCG GCCCC CTCCTCACGCACGAG Tpen_0231 208540 - 207719 - | hypothetical protein TERM 73 207917 - 207893 - G 72 -5 -4.67353 | overlap 207895 CCACGTACCGAAAAA CACTGCGACA CCGTT TTTCGCAGTA GCCTCTCTCTTTATC Tpen_0232 208934 - 208713 - | putative transcriptional regulator Tpen_0233 210459 - 209029 - | preprotein translocase subunit SecY rpl15p 210917 - 210462 - | 50S ribosomal protein L15P rpl30p 211524 - 211054 - | 50S ribosomal protein L30P rps5p 212139 - 211531 - | 30S ribosomal protein S5P TERM 74 212189 - 212177 - R 70 -4.9 -4.58663 | ATTATCGGTTAAAAA CATTA TTG TAATG CCTCCTCGATCTTCT rpl18p 212769 - 212179 - | 50S ribosomal protein L18P rpl19e 213214 - 212747 - | 50S ribosomal protein L19e Tpen_0239 213695 - 213216 - | ribosomal protein L32e Tpen_0240 214074 - 213685 - | 30S ribosomal protein S8P rps14P 214249 - 214085 - | 30S ribosomal protein S14P rpl5p 214802 - 214254 - | 50S ribosomal protein L5P Tpen_0243 215557 - 214802 - | 30S ribosomal protein S4e rpl24p 215936 - 215541 - | 50S ribosomal protein L24P TERM 75 216097 - 216057 - R 100 -15.5 -3.29511 | opp_overlap 216059 CCTACCTTGCTAGAA CAGCGCCAACCGTAGAGAA GAG TTCCCTACTGCTGGGGCTG TTCCGCAATCAACCG Tpen_0245 216490 - 216083 - | hypothetical protein Tpen_0246 217619 - 216582 - | eIF-2B alpha/beta/delta-related uncharacterized proteins TERM 76 217468 - 217424 - G 75 -12.1 -3.27525 | overlap 217433 CTCCGGGAAAGTTAA CGGCGAAAAGCGCGACAGC GTAGGCT GCTGCCACGCCTATAGCCG GTGCCCCTCTAATCT TERM 77 217459 - 217433 - G 80 -9.4 -4.1466 | overlap 217424 AGTTAACGGCGAAAA GCGCGACAGC GTAGGCT GCTGCCACGC CTATAGCCGGTGCCC Tpen_0247 218292 - 217693 - | hypothetical protein Tpen_0248 219399 - 218299 - | peptidase M24 TERM 78 220028 - 220047 + G 74 -6.4 -4.42788 | opp_overlap 220045, overlap 220030 TACTTGCGGCTCTTC GAGTTGCT CGCT AGCAACGC TTTTCTAGCGTTAAC TERM 79 220235 - 220251 + G 73 -2.9 -4.72846 | GCTGTGGGCGTTACT CTGGCAA GCA TTCCCGG TTTTTCCCTGTCTAG TERM 80 220640 - 220658 + G 71 -10.3 -3.48924 | GGTATGAGCGACCTC GCGAAGC CTAAA GCTTCGC TTATCTGCAGGGTAG Tpen_0249 219482 - 220855 + | hypothetical protein Tpen_0250 221022 - 222215 + | galactose-1-phosphate uridylyltransferase-like Tpen_0251 222273 - 223064 + | hypothetical protein Tpen_0252 223069 - 223485 + | hypothetical protein Tpen_0253 223448 - 223996 + | protein of unknown function, ATP binding Tpen_0254 224114 - 224491 + | roadblock/LC7 family protein Tpen_0255 225731 - 224496 - | aminotransferase, class I and II Tpen_0256 226607 - 225780 - | hypothetical protein rps11p 227342 - 226872 - | 30S ribosomal protein S11P rps4p 227853 - 227335 - | 30S ribosomal protein S4 rps13p 228329 - 227856 - | 30S ribosomal protein S13P Tpen_0260 229940 - 228459 - | hypothetical protein TERM 81 229272 - 229303 + g 76 -12.2 -3.4072 | opp_overlap 229270 GTCACTAGGAAAGGC CGCGAGCGTGGCTG GCAA CTGCCACGGTTGCG TTGTGCTGAAACGTA TERM 82 230246 - 230224 - R 90 -14.8 -2.91264 | CGGTTGAGGGAGAGA CGCCCCAGCC CGG GGCTGGGGCC CCAGAGCCCCGCCTC Tpen_0261 230652 - 230413 - | hypothetical protein TERM 83 230680 - 230715 + H 83 -12.6 -3.36823 | gap 1, overlap 230706 TCTCCCGGGGGCTTT GCCTGTGTCGCCCCC GGGGGGG GGGGGTGACGC-GGC TTCACTTTTCGGCCG TERM 84 230791 - 230806 + H 90 -6.8 -5.055 | overlap 230792 CTGCGCTTGTAAACG TGGGAG CTTT CTCCCG TTTTTTCCGCGTTGA Tpen_0262 230852 - 231082 + | hypothetical protein Tpen_0263 231333 - 232445 + | mandelate racemase/muconate lactonizing protein TERM 85 232536 - 232587 + G 72 -5.3 -4.49556 | gap 3 GATGTGCTAGACCTC CTCTTCCCCTA-CGACGTCGAAGTCA GGG TGAC--CGGCGTTTCTAGGGGGAGGG TTTCTTTGGTCACGC TERM 86 232721 - 232733 + G 75 -4.1 -4.72272 | overlap 232714 TGCCCAGACTCTGAG GGAGA TTG TTTCC TTTTTCCTCGAAGAG Tpen_0264 232458 - 232967 + | hypothetical protein TERM 87 233494 - 233504 + G 71 -8.2 -4.0162 | TGCGGACTCGATATC CCCC GGA GGGG TTTCTCCTCTCAGGA Tpen_0265 233137 - 234450 + | cell division control protein 6 Tpen_0266 235681 - 234440 - | replication factor C large subunit rfc 236665 - 235688 - | replication factor C small subunit Tpen_0268 237343 - 236741 - | 30S ribosomal protein S7P Tpen_0269 238871 - 237423 - | hypothetical protein Tpen_0270 238948 - 239331 + | hypothetical protein Tpen_0271 239837 - 239340 - | hypothetical protein Tpen_0272 240924 - 239839 - | isopentenyl pyrophosphate isomerase Tpen_0273 241850 - 240987 - | hypothetical protein rps2P 242599 - 241955 - | 30S ribosomal protein S2 Tpen_0275 243760 - 243029 - | hypothetical protein Tpen_0276 243916 - 244188 + | DNA-directed RNA polymerase subunit N rps9p 244662 - 244264 - | 30S ribosomal protein S9P Tpen_0278 245123 - 244659 - | ribosomal protein L13 Tpen_0279 245500 - 245138 - | 50S ribosomal protein L18e Tpen_0280 246741 - 245890 - | RNA polymerase, insert rps12P 247214 - 246771 - | 30S ribosomal protein S12P Tpen_0282 247736 - 247287 - | NusA family protein Tpen_0283 248047 - 247733 - | ribosomal protein L7Ae/L30e/S12e/Gadd45 Tpen_0284 249261 - 248050 - | DNA-directed RNA polymerase, subunit A'' Tpen_0285 251920 - 249254 - | DNA-directed RNA polymerase subunit alpha Tpen_0286 255323 - 251931 - | DNA-directed RNA polymerase subunit beta rpoH 255562 - 255320 - | DNA-directed RNA polymerase subunit H Tpen_0288 255770 - 257263 + | glycyl-tRNA synthetase Tpen_0289 257962 - 258300 + | hypothetical protein Tpen_0290 258554 - 258309 - | RNA polymerase Rpb6 Tpen_0291 260293 - 258656 - | thermosome TERM 88 259105 - 259121 + g 71 -12.3 -2.89191 | TGATCACGTTCCTCA CGACGCT TAG AGCGTCG TGTATGGCCCTCTCG Tpen_0292 260514 - 260903 + | putative phage repressor TERM 89 261156 - 261135 - f 95 -15.9 -3.03771 | opp_overlap 261135 261143, overlap 261125 GTATAGTCCGGAACA TCCCGGGTC TCCG GACCCGGGA TCCGAGAGTTTCCGG Tpen_0293 261177 - 261605 + | TATA-box binding TERM 90 261797 - 261783 - g 86 -8.6 -4.63952 | opp_overlap 261790 AGGATAAACAAGAAA GTTCTC CCC GAGAAC TACCCGGCGTTTTAC Tpen_0294 261738 - 262190 + | ribosomal-protein-alanine acetyltransferase Tpen_0295 263464 - 262187 - | extracellular ligand-binding receptor rpl40e 263667 - 263822 + | 50S ribosomal protein L40e Tpen_0297 263905 - 264120 + | hypothetical protein TERM 91 265989 - 265979 - g 71 -6.8 -4.25104 | overlap 265988 CCCTCCGCAGGAAAA GCTC GAA GAGC TCCTCCAGAACATCC Tpen_0298 264117 - 266624 + | DNA polymerase I Tpen_0299 266958 - 266653 - | hypothetical protein TERM 92 266839 - 266829 - G 73 -3.2 -4.83169 | opp_overlap 266812 266809 ACTTCGTTAGAAAAA CGAA GTC CTCG TTCCTTTCTTCGAAA Tpen_0300 267406 - 267023 - | hypothetical protein TERM 93 267707 - 267728 + r 78 -9.4 -3.99957 | overlap 267685 CACAATCTCCTGTAT CGCGCGAT TTTCTT GTCGCGCG TTTATCCCTCTTTCA TERM 94 268252 - 268231 - R 90 -8 -4.75372 | overlap 268248 AGGAGTCATTAAAAA GCACGCTT TTTTAG AAGCGCGC TTCGCAGAAAAGTTT Tpen_0301 268801 - 268433 - | hypothetical protein Tpen_0302 270002 - 268962 - | flap endonuclease-1 Tpen_0303 270255 - 269992 - | hypothetical protein Tpen_0304 272450 - 270252 - | AAA family ATPase, CDC48 subfamily protein TERM 95 271523 - 271546 + g 90 -4.6 -5.39755 | gap 1, overlap 271526 271527 CAAGCCCGTCCATTA GTGCTAGTAGC TGT GCTACTA-CTC TTTTTTCTACTTCTC TERM 96 271526 - 271544 + g 72 -6 -4.31563 | overlap 271523 271527 GCCCGTCCATTAGTG CTAGTAGC TGT GCTACTAC TCTTTTTTCTACTTC Tpen_0305 272671 - 273462 + | peptidylprolyl isomerase, FKBP-type Tpen_0307 273999 - 274601 + | proteasome endopeptidase complex Tpen_0308 274722 - 274994 + | hypothetical protein TERM 97 276413 - 276398 - g 89 -6 -5.15634 | opp_overlap 276398, overlap 276399 GACCTCATGAAAAAA GGCGCG GTGC CGCGCG TGCCTATATTCATTG TERM 98 276412 - 276399 - g 72 -9.5 -3.68658 | opp_overlap 276398, overlap 276398 ACCTCATGAAAAAAG GCGCG GTGC CGCGC GTGCCTATATTCATT Tpen_0309 275102 - 277021 + | beta-lactamase domain-containing protein Tpen_0310 277495 - 277040 - | PUA domain-containing protein TERM 99 277341 - 277315 - G 78 -11 -3.73294 | opp_overlap 277306, overlap 277306 277337 277339 GAAAAACAGGGTAAA CGCTGTTCTT GTAGATG AAGAACAGCG TCGGGACGAGCCCCG Tpen_0311 278105 - 277524 - | tRNA intron endonuclease domain-containing protein TERM 100 278620 - 278587 - g 81 -13.1 -3.5774 | opp_overlap 278613, overlap 278578 278610 ACGTAACGGTTGAAA CCGTAGAGCCGCTCT TGGA AAAGCGGCTCGCCGG GTTCGGCGACGTGTT Tpen_0312 278271 - 278819 + | molybdenum cofactor synthesis domain-containing protein Tpen_0313 278816 - 279268 + | molybdenum cofactor biosynthesis protein C Tpen_0314 279629 - 279252 - | molybdopterin biosynthesis MoaE Tpen_0315 279970 - 279719 - | MoaD family protein Tpen_0316 281193 - 279985 - | succinyl-diaminopimelate desuccinylase TERM 101 281012 - 281037 + g 75 -5.5 -4.58395 | gap 1, overlap 281012 281013 GACGCAATAACTGTA G-GGATCTCG CCTCCCT CGAGATCCAC TTTTTCAACCCTCAA Tpen_0317 282080 - 281250 - | ribose-phosphate pyrophosphokinase TERM 102 281438 - 281449 + g 71 -7.2 -4.18018 | opp_overlap 281427, overlap 281437 CAGAGCTGGCACCCT GCGC TAAC GCGC TTTTAGCTGCCAGCG Tpen_0318 284536 - 282269 - | (NiFe) hydrogenase maturation protein HypF TERM 103 282374 - 282355 - G 71 -12.2 -2.98823 | opp_overlap 282364 282365 TTCTTGGGATATACA CGTTCTCG CCTC CGAGAACG GACTTTATTCCCTTG TERM 104 282565 - 282551 - G 72 -8.6 -3.86194 | AAGTCTTGCTAGAAA GTCCTT TGT AAGGAC GACTCCCTCTTCGCG TERM 105 283699 - 283746 + g 78 -14.3 -2.6927 | gap 1, opp_overlap 283695, overlap 283701 GGATTAGTATAGGCC TAGCGGGGCTCGA-GAGTATGC TCTTC GCATTCTCGTCGAGCACTGCTA TCCTCTCTGCAACCT TERM 106 283701 - 283744 + g 74 -12.5 -2.88999 | gap 1, opp_overlap 283695, overlap 283699 ATTAGTATAGGCCTA GCGGGGCTCGA-GAGTATGC TCTTC GCATTCTCGTCGAGCACTGC TATCCTCTCTGCAAC TERM 107 285338 - 285310 - g 75 -10.3 -3.68351 | opp_overlap 285308 285304 CTTGCACTAGCTAAA GCTCTCGCAGGCT TCA AGCCTAAGAGAAC TGTGCGTTTCGCGTT Tpen_0319 284593 - 285843 + | peptidase M28 Tpen_0320 287307 - 285853 - | thiamine biosynthesis protein ThiI TERM 108 286567 - 286542 - G 82 -10.5 -4.12902 | gap 1, opp_overlap 286542, overlap 286533 GAACTACCCCGAAAA GCTCAGGGGCGA CTT TCGCCC-TAAGC TCTCTAAGCAACGGG TERM 109 287376 - 287388 + r 77 -3.3 -5.0538 | TACAGCATGTAAAGC CGCGA GCA TCACG TTTTTTAACGTGGAA Tpen_0321 287955 - 287698 - | 50S ribosomal protein L35Ae TERM 110 287816 - 287838 + g 70 -2.7 -4.78753 | gap 1, overlap 287817 ACGAATTTTTCGCCT GTT-TCGGGG TGTA CCCAGAGAAC TTTTCTTCCTATTAC TERM 111 287892 - 287914 + g 75 -9.2 -3.81146 | opp_overlap 287892 CACCATCTAGAGACA GTATTACCTG CCG CGGGTAGTAC TTGTTCATTCCGCGC Tpen_0322 289943 - 288486 - | hypothetical protein Tpen_0323 290016 - 290246 + | hypothetical protein Tpen_0324 290935 - 290327 - | hypothetical protein Tpen_0325 293375 - 290946 - | valyl-tRNA synthetase TERM 112 292187 - 292210 + g 76 -6.8 -4.45083 | gap 1, opp_overlap 292172 CCCAGTCCCAGTCCA GGCTC-AGAAC CCA GTTTTCGAGCC TTTTATACATGTAGC Tpen_0326 294254 - 293487 - | glutaredoxin-like domain-containing protein Tpen_0327 295011 - 294340 - | ribose 5-phosphate isomerase Tpen_0328 295173 - 295481 + | hypothetical protein TERM 113 295793 - 295774 - g 72 -8.6 -3.89614 | AAGTGAGACATGAAA GCGTAACC GAAG AGTTACGC CTCGCGGAAACCTAC Tpen_0329 295572 - 296237 + | hypothetical protein Tpen_0330 297656 - 296262 - | pyruvate kinase Tpen_0331 300908 - 297750 - | DEAD/DEAH box helicase domain-containing protein TERM 114 297840 - 297875 + g 75 -10.6 -3.73224 | gap 1, opp_overlap 297852 GATGACCCTAACGTT TTCGTCGATGAA-CCTC CTG GAGGCTTCGTCGAGGAA TTTCATGGAGGGTAG TERM 115 299538 - 299528 - G 70 -2.4 -4.85599 | overlap 299529 299530 CCCACTTCACAAAAA GGTC GAC GCCC CTCGATAGGAGCTCG TERM 116 300776 - 300788 + g 72 -9.1 -3.85698 | opp_overlap 300768 300769 CCAACAAGGCTGCAA GCCTC CCC GAGGC TTTCTCAACGCCCAA Tpen_0332 300993 - 301661 + | hypothetical protein TERM 117 301809 - 301795 - g 75 -5.6 -4.67556 | overlap 301796 AGAAGACCTGAAAAA TGCGAG AAT CTCGCG TAAAATGATCTCCGA Tpen_0333 301703 - 301951 + | hypothetical protein TERM 118 302008 - 302019 + F 70 -4.4 -4.57073 | GCTCGAAGTCGGCAC CCTT GAGT AAGG TTTTTCCGAGGAATC Tpen_0334 302050 - 302895 + | bis(5'nucleosyl)-tetraphosphatase, ApaH Tpen_0335 304826 - 302907 - | anaerobic ribonucleoside triphosphate reductase TERM 119 304164 - 304184 + g 78 -8.9 -4.18367 | opp_overlap 304163 GTAGAGCTCGAAGAG GGCCTCGTC CAC GGCGAGGGC TTTCTCTATGTAGTC TERM 120 304786 - 304799 + g 73 -3.1 -4.72007 | TACGACTCTTCTAGA TCTCT AACC AGGGA TTTCTTTTGCTGCAC TERM 121 305608 - 305618 + G 74 -6.8 -4.3898 | CTGAACGCCCCTAGA CCCT CAA AGGG TTTTGTAGCGCTAAT Tpen_0336 305104 - 306630 + | CoA-binding domain-containing protein TERM 122 307091 - 307081 - g 74 -6.8 -4.26903 | overlap 307057 307082 CGTATCCGACGAAAA CGTC ACA GACG CTGTACATGAGTTCC Tpen_0337 306683 - 309514 + | V-type ATPase, 116 kDa subunit Tpen_0338 309566 - 309922 + | H+-transporting two-sector ATPase, C subunit Tpen_0339 310959 - 310069 - | hypothetical protein Tpen_0340 311562 - 310960 - | V-type ATPase, D subunit Tpen_0341 312985 - 311567 - | V-type ATP synthase subunit B TERM 123 312049 - 312062 + g 75 -3.8 -4.72486 | opp_overlap 312049, overlap 312042 TTAATATTGGAAAGA GGGT TATACT ACCC TTTTTGCCCTTTATG Tpen_0342 314787 - 312982 - | V-type ATP synthase subunit A Tpen_0343 314978 - 316054 + | hypothetical protein Tpen_0344 316632 - 316078 - | hypothetical protein Tpen_0345 316996 - 316676 - | hypothetical protein Tpen_0346 318462 - 317146 - | peptidase M48, Ste24p TERM 124 318392 - 318380 - G 83 -5.5 -5.00616 | overlap 318347 TTCTTTTCGAAAAAA CCCTC AAC AAGGG AGCGTAACAAGCCAG Tpen_0347 320415 - 318487 - | hypothetical protein TERM 125 320498 - 320486 - H 76 -7.7 -4.17958 | AACATCTGTAAGAAA CACGT ATT ACGTG CGCTCTTCTCCCCGA TERM 126 320927 - 320913 - H 83 -5.8 -5.00616 | TCTTTTTGCAAAAAA TTAAAG TAC CTTTAA AACTGTTAACCAACA Tpen_0348 320952 - 321212 + | transcription factor CBF/NF-Y histone TERM 127 321394 - 321380 - g 81 -2.8 -5.30348 | ACTCAACAAGAAAAA GCTAAT GGA AATAGC GGATATCCCGTCTCG Tpen_0349 321279 - 321566 + | ribosomal protein S17e Tpen_0350 321800 - 322231 + | hypothetical protein TERM 128 322302 - 322314 + G 71 -7.7 -4.08557 | opp_overlap 322302 GGCTCGCAATACTAA CTCCA CCG TGGAG TTCTTCTTTGAAAAC Tpen_0351 322252 - 322527 + | hypothetical protein Tpen_0352 322625 - 322957 + | RNA polymerase Rpb4 Tpen_0353 322984 - 323613 + | putative nucleotide binding protein TERM 129 323696 - 323711 + G 71 -6.8 -4.2349 | TACTCTCTATGCGAC GCCTGC ACGG GTAGGC TTTTCGGTCTGAGAG Tpen_0354 323597 - 324931 + | pseudouridylate synthase Tpen_0355 325254 - 324946 - | 50S ribosomal protein L21e Tpen_0356 325358 - 326989 + | tRNA-guanine transglycosylases, various specificities Tpen_0357 327748 - 327005 - | hypothetical protein Tpen_0358 327900 - 328286 + | 30S ribosomal protein S8e Tpen_0359 328289 - 328594 + | ribonucleoprotein complex SRP, Srp19 component Tpen_0360 330476 - 328578 - | glutamyl-tRNA(Gln) amidotransferase subunit E Tpen_0361 331834 - 330479 - | glutamyl-tRNA(Gln) amidotransferase subunit D TERM 130 331547 - 331534 - G 74 -2.3 -4.99043 | overlap 331535 TCCCCACAAAGAAAA CCCTG GGTT CAGGC TGCCCGAAGTCCTCC TERM 131 331710 - 331687 - G 70 -12.4 -2.74999 | overlap 331684 CAAGCTTTAAGACTA CGACGTCCGG ATCC CCGAACGCCG GGCGTGGCATGAGTA Tpen_0362 332014 - 332163 + | 30S ribosomal protein S30e Tpen_0363 332538 - 332164 - | hypothetical protein Tpen_0364 332857 - 332552 - | Fis family transcriptional regulator Tpen_0365 333446 - 332961 - | putative RNA methylase Tpen_0366 333601 - 334065 + | AsnC family transcriptional regulator Tpen_0367 334748 - 334038 - | putative serine/threonine protein kinase Tpen_0368 336175 - 334772 - | tRNA adenylyltransferase TERM 132 335780 - 335767 - G 80 -2.3 -5.24129 | overlap 335768 CGCTTGGAGAAAAAA CCCTG TATG CAGGC ACTACATCTACTTCG Tpen_0369 336725 - 336162 - | 2'-5' RNA ligase Tpen_0370 337131 - 336718 - | hypothetical protein Tpen_0371 337264 - 338052 + | GTPase Tpen_0372 338742 - 338047 - | orotidine 5'-phosphate decarboxylase Tpen_0373 339754 - 338798 - | hypothetical protein TERM 133 338866 - 338840 - G 74 -11.6 -3.62096 | GTTTATCAGGTTAAA CTCGACTAGTAG CTT CCACTCGTCGAG GGTTACGGGGTCTCC Tpen_0374 340846 - 340007 - | zinc finger TFIIB-type domain-containing protein TERM 134 340459 - 340469 + g 74 -8.2 -4.15044 | TTATGGCAGCTGCCA CCGC CTT GCGG TTTCTTCCGCGCAAC Tpen_0375 341124 - 340843 - | gar1 - like small nucleolar RNP TERM 135 341169 - 341155 - H 86 -7 -4.91109 | overlap 341136 341156 TCGCGATGATAAAAA CCTCGC GCC GCGCGG CGGCAAAGCTATAAA TERM 136 342156 - 342143 - g 78 -6.7 -4.56597 | CTGGGCGCCGAAAAA GCTCT CTTC AGAGC ACTCAGATTCGGCGC Tpen_0376 341219 - 342457 + | Pre-mRNA processing ribonucleoprotein, binding region Tpen_0377 342454 - 343155 + | fibrillarin Tpen_0378 343292 - 344185 + | helix-turn-helix domain-containing protein TERM 137 344215 - 344187 - f 76 -7.4 -4.24342 | CGCGTGACGAATAAA TGCGGATGCCCG TTTTC CAGGCATCCATA TAGGCGGTATGCATG TERM 138 344293 - 344315 + G 72 -6.1 -4.3739 | opp_overlap 344290 344295, overlap 344295 CCCCCCTGAAAAGTA CAGGGACCC TGCTT GGGCCCCGG TTTTCTACAACCCTA Tpen_0379 344228 - 345382 + | tRNA (guanine-N(2)-)-methyltransferase Tpen_0380 345815 - 345390 - | translation initiation factor IF5 TERM 139 345965 - 345949 - H 85 -3.1 -5.3671 | AATATAACGAAAAAA TTTTTAT AGT ACAAAAA CCACAAAACAAGTTG TERM 140 345983 - 345966 - H 71 -2 -4.95155 | overlap 345967 345978 TTTATAGTACAAAAA CCACAA AACAAG TTGTGA GTAACAAGTACCTCT Tpen_0381 345980 - 346570 + | hypothetical protein Tpen_0382 347193 - 346597 - | hypothetical protein TERM 141 347034 - 347046 + g 73 -3.4 -4.77036 | AGGTCTTTTTGACCT CTTC CTTTA GAAG TTTTTCATCCTCACC Tpen_0383 347904 - 347344 - | phosphoribosyltransferase Tpen_0384 348951 - 347956 - | translation initiation factor IF-2B subunit delta Tpen_0385 349907 - 348948 - | initiation factor 2B related Tpen_0386 350727 - 349900 - | ribose-phosphate pyrophosphokinase Tpen_0387 351319 - 350999 - | hypothetical protein Tpen_0388 352151 - 351372 - | RNase P/RNase MRP subunit p30-like TERM 142 351516 - 351506 - G 79 -5.4 -4.84359 | opp_overlap 351506, overlap 351507 351508 TTATCCCGAGAAAAA CTTC CCC GAAG CTTATTACAGCCCGA Tpen_0389 352674 - 352222 - | hypothetical protein Tpen_0390 353239 - 352676 - | 50S ribosomal protein L15e Tpen_0391 354322 - 353318 - | small GTP-binding protein Tpen_0392 354473 - 355087 + | proteasome endopeptidase complex Tpen_0393 355204 - 357588 + | DNA polymerase II Tpen_0394 358282 - 357629 - | hypothetical protein Tpen_0395 358561 - 358283 - | hypothetical protein Tpen_0396 359019 - 358762 - | hypothetical protein Tpen_0397 360000 - 359023 - | hypothetical protein Tpen_0398 360092 - 360607 + | nucleic acid binding, OB-fold, tRNA/helicase-type TERM 143 360614 - 360602 - f 81 -6.3 -4.83615 | GACTTCTCAGAAAAA CGTTA AAG TAACG GCGCATAGATGGGAA Tpen_0399 360923 - 361243 + | hypothetical protein Tpen_0400 361585 - 361259 - | hypothetical protein TERM 144 361910 - 361898 - R 100 -3.3 -5.66338 | opp_overlap 361905 AAAGAGAAGAAAAAA CTGTG TCT CGCAG TGTCAGCGGTTCGTC Tpen_0401 362906 - 361998 - | signal-transduction protein TERM 145 363141 - 363124 - R 81 -10.5 -3.64703 | TCGTCCCGACCCAAA GCCCCCG TCGC CGGGAGC AACGGATCGGGAGCG TERM 146 363490 - 363506 + r 77 -7.3 -4.57353 | GCCCGCGACGAGCCG GTTACTC CCG GGGTAAC TTTTCTGTCATGCCC TERM 147 364316 - 364341 + r 81 -9.6 -4.07568 | GTCGGTTCTCGGTAC GGGCGTGGGG CTCCTT CCCCGCTCCC TTTTCACGGGCCCCA TERM 148 365452 - 365465 + r 78 -9.5 -3.90112 | CCTCCCCTCGTACTC CCCGG TCGC CCGGG TTTCCTTCGGGGAGG TERM 149 365784 - 365806 + r 89 -13.5 -3.28765 | CTGCAACCCCACATC CGTCCATGC TCTTC GCATGGACG TTCGGTTTGGGCTCT TERM 150 366166 - 366189 + r 81 -12.5 -3.16267 | GATTCACGCCCTTCA CCCGGAAAC GCGCTG GTTTCCGGG TTGCATCTAATTAGC TERM 151 367154 - 367172 + r 77 -12.4 -2.71791 | overlap 367153 CAGTATCCCTCCGCT CCCACGGT TGA GCCGTGGG CTTTAAGGAGGGACT TERM 152 367334 - 367316 - R 91 -11.7 -4.10657 | TTAGACCGGGCAAAA GCCACCC TCTTC GGGTGGC ACTCGGGGTGACTCC TERM 153 367520 - 367548 + r 74 -10.3 -3.53012 | overlap 367521 367545 367546 AGCCCCATCCTCGGG CGGCCACGGTA AGCATGG TACCGTGGCCC TTTCAGCGCGGACCC TERM 154 367521 - 367547 + r 85 -13.8 -2.71712 | overlap 367520 367545 367546 GCCCCATCCTCGGGC GGCCACGGTA AGCATGG TACCGTGGCC CTTTCAGCGCGGACC TERM 155 367813 - 367828 + r 95 -11.8 -4.36914 | TTATCCCCGAGAGTT CCGGGC TGGC GCCCGG TTTTCTCGGGGACGC TERM 156 367858 - 367870 + r 91 -10.5 -4.18018 | CACTGTGTTGCCATG GGCGG AGG CCGCC TTTTCACTGGGAGGG TERM 157 367878 - 367898 + r 86 -12.5 -3.48276 | overlap 367879 AGGCCGCCTTTTCAC TGGGAGGGG TTG CCCCTCCCC TTATCTAGGCGAGCC TERM 158 367879 - 367897 + r 100 -16 -2.68823 | overlap 367878 GGCCGCCTTTTCACT GGGAGGGG TTG CCCCTCCC CTTATCTAGGCGAGC Tpen_0402 368566 - 367982 - | hypothetical protein TERM 159 368025 - 368040 + g 77 -2.4 -5.09173 | TAAAACTTTGCAGCA GCGCGG GGGT CTACGC TTTTTTCAAGTATTG TERM 160 368524 - 368538 + g 85 -10 -4.26076 | ACCCAGCGAGCCTAA GGTTCC TCA GGAACC TTTTCCTCAACGTAG Tpen_0403 368755 - 369135 + | hypothetical protein Tpen_0404 370559 - 369207 - | UbiD family decarboxylase TERM 161 369979 - 369998 + g 75 -9.2 -3.89881 | CCTATCAGTATGGCG GCGGGGAG GTTC CTCCCAGC TTTCTCCGCGTTCCT TERM 162 370614 - 370585 - R 77 -7.1 -4.51378 | gap 1 AGTTAGAGCACAAAA GGAAAGAG-CCGGG GAG CCCGTTCCCCTTCC AACCCTCGTGTTTAT Tpen_0405 371114 - 370641 - | NusG antitermination factor Tpen_0406 371397 - 371128 - | hypothetical protein Tpen_0407 372439 - 371468 - | ornithine carbamoyltransferase TERM 163 372654 - 372643 - g 72 -5.8 -4.46581 | GAAAACGCGATAAAA CTCG ACGT CGAG TGGAGGGCGAAGAAA Tpen_0408 372541 - 373899 + | seryl-tRNA synthetase Tpen_0409 373983 - 374381 + | translation initiation factor IF-5A Tpen_0410 374428 - 374934 + | phosphopantetheine adenylyltransferase Tpen_0411 375187 - 374954 - | hypothetical protein Tpen_0412 376218 - 375193 - | glycosyl transferase family protein Tpen_0413 377218 - 376232 - | putative deoxyhypusine synthase Tpen_0414 377449 - 377240 - | DNA-directed RNA polymerase subunit E, RpoE2 Tpen_0415 378101 - 377433 - | DNA-directed RNA polymerase subunit E' TERM 164 378881 - 378841 - H 100 -15.6 -3.56092 | CGAGGACCGGCGAAA GCCTCCAC-CGTGCATGGGT ATG ACCC-TCCACGGGTGGAGGC GACGACGCGGTGGAT Tpen_0416 379074 - 380036 + | DNA-cytosine methyltransferase TERM 165 380116 - 380103 - T 70 -5.9 -4.27796 | opp_overlap 380103 GAAGAAAGCTGAAAA CGAGG GCCT CCCCG GTTTACAAATTCAGG Tpen_0417 380357 - 380148 - | hypothetical protein Tpen_0418 380439 - 381863 + | hypothetical protein Tpen_0419 382009 - 382533 + | hypothetical protein rpl37e 382788 - 382597 - | 50S ribosomal protein L37e Tpen_0421 383021 - 382800 - | like-Sm ribonucleoprotein, core TERM 166 383887 - 383877 - g 76 -4.6 -4.78107 | TACGACGAGGAAAAA GCCC AGC AGGC TACCCCTCACGCGCG Tpen_0422 383514 - 383909 + | ribosomal protein S6e TERM 167 384076 - 384063 - f 74 -2.3 -5.06223 | ACAAACCAAAGAAAA GGAGT TTTT ACGCC AGCCCTAGCCCCCTG Tpen_0423 384343 - 385791 + | hypothetical protein Tpen_0424 385880 - 386197 + | translation initiation factor eIF-1A Tpen_0425 386540 - 386202 - | thioredoxin domain-containing protein TERM 168 386839 - 386863 + G 72 -6.4 -4.27467 | gap 1 GTCCCGTTACTCGAG GCTCGCCTACG AGTA CG-ACGCGAGC TTTATCTTCGTCTTC TERM 169 386970 - 386934 - g 77 -2.3 -5.10526 | gap 1 AGAGGAAAAAACAAA GAGAGAAGGCTAAGCA GGAGTA CGCGGAGC-TTCTCTC GAAGGGTGACCTCAG Tpen_0426 386639 - 387664 + | flap endonuclease-1 Tpen_0427 387754 - 389349 + | DNA ligase I, ATP-dependent Dnl1 Tpen_0428 389346 - 390317 + | hypothetical protein Tpen_0429 391247 - 390339 - | signal recognition particle-docking protein FtsY Tpen_0430 391642 - 391253 - | prefoldin, alpha subunit Tpen_0431 391911 - 391654 - | ribosomal LX protein TERM 170 392077 - 392122 + H 71 -9.6 -3.53761 | overlap 392078 AGGTGGTGGACCGGC CGGGATTCGAACCCGGGACC TCCGCC GCTCTCGGGATCGAAGCCCC TTTACGCGACCCTTG TERM 171 392078 - 392121 + H 81 -13.1 -2.72043 | overlap 392077 GGTGGTGGACCGGCC GGGATTCGAACCCGGGACC TCCGCC GCTCTCGGGATCGAAGCCC CTTTACGCGACCCTT Tpen_0432 392356 - 392667 + | hypothetical protein TERM 172 392936 - 392922 - g 70 -4.2 -4.56597 | GGCTTGTGCGAAAAA GGTGGA GGC TTCACC CAATGGATTTTGGCT Tpen_0433 392726 - 393340 + | hypothetical protein Tpen_0434 393356 - 393814 + | hypothetical protein Tpen_0435 394169 - 393852 - | hypothetical protein TERM 173 394195 - 394211 + r 79 -2.3 -5.26316 | CAAAGTCTTGTTCAT CATTACT TAA ATTAATG TTTTTTGTAGCGTAA TERM 174 394429 - 394473 + r 81 -7 -4.67755 | overlap 394423 394431 CGGGTTCAAGTCCCG GCGGGCCCGCCAAAGGGTTC GCGCG GAGCTCTTAGCTGGGCTCTC TTTTTCCCTGCGTCT TERM 175 394431 - 394471 + r 74 -8.2 -3.95214 | overlap 394423 394429 GGTTCAAGTCCCGGC GGGCCCGCCAAAGGGTTC GCGCG GAGCTCTTAGCTGGGCTC TCTTTTTCCCTGCGT Tpen_0436 394729 - 394460 - | hypothetical protein Tpen_0437 396013 - 394961 - | hypothetical protein Tpen_0438 397118 - 396006 - | hypothetical protein Tpen_0439 399225 - 397210 - | type II secretion system protein E TERM 176 399321 - 399285 - H 100 -11.6 -4.56597 | gap 1, overlap 399288 399290 CGCCGCGCGCAAAAA GCACACCTCGCGCGCAT TACG ACGCGCGCGA-GCGCAC ACACGACTAAAACAT TERM 177 399318 - 399288 - H 77 -11.9 -3.23708 | gap 1, overlap 399285 399290 CGCGCGCAAAAAGCA CACCTCGCGCGCAT TACG ACGCGCGCGA-GCG CACACACGACTAAAA TERM 178 399317 - 399290 - H 85 -13.4 -3.18031 | overlap 399288 399285 CGCGCAAAAAGCACA CCTCGCGCGCAT TACG ACGCGCGCGAGC GCACACACGACTAAA TERM 179 400217 - 400194 - g 88 -5.3 -5.2422 | gap 1, overlap 400196 AAGCAGAGGAAAAAA GAGACGACGT TATTT ACGCCGTC-C ACGCCATACTCGGCT TERM 180 400216 - 400196 - g 78 -9 -4.23988 | overlap 400194 GCAGAGGAAAAAAGA GACGACGT TATTT ACGCCGTC CACGCCATACTCGGC Tpen_0440 399377 - 400252 + | hypothetical protein Tpen_0441 400676 - 400260 - | S-adenosylmethionine decarboxylase related Tpen_0442 402243 - 400819 - | hypothetical protein TERM 181 401695 - 401672 - G 70 -4.6 -4.50761 | gap 1 AGCAATTCAAAGAAA GTTGCAA-TCG CGA CGACTTGCCAC TCCTGGTCTGTAGTT Tpen_0443 402314 - 402541 + | hypothetical protein Tpen_0444 403115 - 402564 - | hypothetical protein Tpen_0445 404949 - 403135 - | type II secretion system protein TERM 182 405088 - 405077 - H 75 -4.4 -4.78572 | CGGTAATTAAGAAAA CTCT CGGA AGAG CGTGCGCTAAAAATT TERM 183 405793 - 405769 - g 70 -4.2 -4.63542 | GAGAATTTGTAAAAA CCGTTCTCGA AGTCG TGGAGGACGG CGGGATAGCATTCAT Tpen_0446 405129 - 406415 + | beta-lactamase domain-containing protein Tpen_0447 406948 - 406433 - | heat shock protein Hsp20 Tpen_0448 407141 - 407461 + | ribosomal protein S24e TERM 184 407553 - 407535 - g 80 -2.2 -5.29445 | overlap 407537 GTTGAAGAACAAAAA GTGCCCGC GTT GCGGATCC ATCATGGCCCACCAC Tpen_0449 407467 - 407628 + | ribosomal protein S27a Tpen_0450 409080 - 407683 - | hypothetical protein TERM 185 409389 - 409367 - H 90 -14.8 -2.91264 | overlap 409332 409329 CCGGTTAGGGAGAGA CGCCCCAGCC CGG GGCTGGGGCC CCAGAGCCCCGCCTC TERM 186 410100 - 410077 - g 77 -13.8 -2.93435 | overlap 410079 GCAACCACCTACACA GACGCCAGCC CAGG GGCCGGCGCC GGCCGAGAAGCCTAG TERM 187 410098 - 410079 - g 74 -12.8 -3.01684 | overlap 410077 AACCACCTACACAGA CGCCAGCC CAGG GGCCGGCG CCGGCCGAGAAGCCT TERM 188 410272 - 410282 + G 71 -8.2 -4.08216 | GGCTTTACTCGTGAA CGGG TCG CCCG TTTTACCAGGCGTAG Tpen_0451 409958 - 411334 + | hypothetical protein Tpen_0452 411602 - 412612 + | O-sialoglycoprotein endopeptidase Tpen_0453 412622 - 413347 + | Mn2+-dependent serine/threonine protein kinase Tpen_0454 414406 - 413357 - | hypothetical protein Tpen_0455 414700 - 414431 - | hypothetical protein Tpen_0456 415767 - 414910 - | putative circadian clock protein, KaiC Tpen_0457 415828 - 417387 + | radical SAM domain-containing protein Tpen_0458 418468 - 417353 - | metal dependent phosphohydrolase TERM 189 418957 - 418990 + H 70 -5.9 -4.2558 | overlap 418953 418968 GCACTCCCACGGGTG GCGCGCCAGCATTTG CTAG CAAAAGCTGGTCAGC TTTTACTAGCAAATG TERM 190 418968 - 419003 + H 90 -15 -2.71144 | overlap 418957 GGTGGCGCGCCAGCA TTTGCTAGCAAAAGCT GGTC AGCTTTTACTAGCAAA TGCTTGGCAACACTA TERM 191 419156 - 419144 - H 72 -10.5 -3.10255 | ACAACAGCCAGCGAA GCCCC AAG GGGGC CGATTCATGAGATCC TERM 192 419460 - 419450 - g 74 -6.8 -4.36914 | opp_overlap 419450 GTTTGTCCGAGAAAA GCTC AGG GAGC TTCTCGGGAAGGCGC TERM 193 419938 - 419976 + G 86 -14.6 -3.281 | opp_overlap 419932, overlap 419932 419936 CACAAACATGGCAGG CTGTCTCCTTCCCCGGTT TCT GGCCGGGAAAGGAGGTAG TGTTATACGTTAGAG Tpen_0459 419376 - 420752 + | hypothetical protein Tpen_0460 421036 - 421569 + | hypothetical protein Tpen_0461 422574 - 421558 - | putative rRNA pseudouridine synthase Tpen_0462 422897 - 422601 - | 50S ribosomal protein L14e Tpen_0463 423009 - 423272 + | hypothetical protein Tpen_0464 423269 - 424330 + | radical SAM domain-containing protein TERM 194 424685 - 424651 - T 95 -14.3 -3.53761 | gap 1, opp_overlap 424640 CAAGGCTCTCGTAAA GGCGGTCAGGA-CGGC GAGG GCGGACCCTGACCGCC CGGAGGAGCGCTGTT Tpen_0465 425409 - 424996 - | hypothetical protein TERM 195 425539 - 425527 - H 81 -9.1 -4.0492 | GAACTCTGAGAGAAA GAGCC CTA GGCTC ACGAAAAGTAATGCG Tpen_0466 425657 - 425983 + | regulatory protein, ArsR TERM 196 426127 - 426142 + T 75 -11.8 -3.11316 | TCGGGCACCCCCGCC CGCGCG TCTC CGCGCG TATATTCACTGCTGA Tpen_0467 426962 - 426195 - | methyltransferase type 11 Tpen_0468 428466 - 427168 - | hypothetical protein TERM 197 427360 - 427378 + g 75 -3.7 -4.74801 | TATCTCGGCGTAGAA CGGGTTG TTTCT CTGCCCG TTTTTCCTACCCTTC TERM 198 428512 - 428562 + H 81 -12.7 -3.24924 | gap 1, overlap 428513 428519 428549 TGGAGGGGGCGCCCC TGCGAAGGCGTGCTCGAGGGTT ATCGTGCG AACCATCG-GCGCGCTTTCGCG TCTTCTGGCTAGCAC TERM 199 428513 - 428561 + H 84 -14 -2.5474 | gap 1, overlap 428512 428519 428549 GGAGGGGGCGCCCCT GCGAAGGCGTGCTCGAGGGTT ATCGTGCG AACCATCG-GCGCGCTTTCGC GTCTTCTGGCTAGCA Tpen_0469 428537 - 428746 + | hypothetical protein Tpen_0470 428919 - 429410 + | 30S ribosomal protein S19e Tpen_0471 429458 - 429808 + | DNA-binding TFAR19-related protein Tpen_0472 429892 - 430044 + | ribosomal protein L39e Tpen_0473 430063 - 430374 + | ribosomal protein L31e TERM 200 430963 - 430950 - g 75 -5.3 -4.59853 | TGAACCGCGGAAAAA TGTTC CTAA GAACA GGGCTCGTAGCCAAC Tpen_0474 430382 - 431053 + | translation initiation factor IF-6 Tpen_0475 432710 - 431007 - | radical SAM domain-containing protein Tpen_0476 433645 - 432707 - | thiamine-phosphate kinase Tpen_0477 433883 - 433638 - | hypothetical protein TERM 201 433945 - 433922 - H 100 -11 -4.87803 | opp_overlap 433921 433917 433934, overlap 433923 TAGTCGTAAATAAAA GCTTAGCGCG CTCG CGCGCTAAGT ATCCATTTATCGCGA TERM 202 433944 - 433923 - H 100 -14.5 -3.51958 | opp_overlap 433921 433917 433934, overlap 433922 AGTCGTAAATAAAAG CTTAGCGCG CTCG CGCGCTAAG TATCCATTTATCGCG TERM 203 435557 - 435547 - g 76 -6.8 -4.48987 | opp_overlap 435547 GGTGGAGAACGAAAA GCTC TAC GAGC TACTTCAAGAAAGGC Tpen_0478 434006 - 435772 + | DEAD_2 domain-containing protein Tpen_0479 436493 - 435885 - | sugar isomerase (SIS) TERM 204 436632 - 436607 - R 78 -7.5 -4.323 | opp_overlap 436600, overlap 436600 436598 436608 CGGAAATAGGGAAAA GCTCCCTGGTT TGTA AACCTGGGAGA AAGCTAAAACCGCGA TERM 205 436631 - 436608 - R 74 -11 -3.18657 | opp_overlap 436600, overlap 436600 436598 436607 GGAAATAGGGAAAAG CTCCCTGGTT TGTA AACCTGGGAG AAAGCTAAAACCGCG Tpen_0480 436932 - 436705 - | hypothetical protein TERM 206 437609 - 437577 - g 100 -20.7 -3.36557 | AAGCATGGCAAGTAA CCTCCTTCCCCGG TTTCTGG CCGGGGAAGGAGG TCGAAGTATACATCA Tpen_0481 437003 - 438427 + | hypothetical protein Tpen_0482 439634 - 438948 - | hypothetical protein TERM 207 439190 - 439205 + g 74 -2.4 -5.00616 | overlap 439192 CTAAGCACCGTTCAA GATGCG CTTT CGCGGC TTTTTTCAGAGAAGA rpl14p 440079 - 439654 - | 50S ribosomal protein L14P Tpen_0484 440420 - 440085 - | ribosomal protein S17 Tpen_0486 442315 - 442031 - | ribonuclease P, Rpp29 Tpen_0487 442617 - 442363 - | ribosomal protein L29 Tpen_0488 443177 - 442614 - | ribosomal protein S3 Tpen_0489 443614 - 443231 - | ribosomal protein L22 TERM 208 444378 - 444367 - H 72 -7.2 -4.17698 | overlap 444376 ACCCAGACAGATAAA GCGG AAAA CCGC CAGGAAAAAGGCGCC TERM 209 444398 - 444388 - H 93 -8.2 -4.73388 | overlap 444376 444389 AACCGCCAGGAAAAA GGCG CCC CGCC CCCCTCCTCATAGTA rpl37ae 444461 - 444736 + | 50S ribosomal protein L37Ae Tpen_0492 445601 - 444789 - | ribosomal RNA adenine methylase transferase rpl7ae 446059 - 445670 - | 50S ribosomal protein L7Ae TERM 210 445976 - 446002 + g 75 -5.8 -4.58283 | overlap 445977 CTTACCGCCTTTCTC CCTTGCCAGGCT GAG AGCTTGGTAGGC TTTTTCCGCCAGTTC Tpen_0494 446208 - 447377 + | Fmu (Sun) domain-containing protein rps28e 447446 - 447679 + | 30S ribosomal protein S28e TERM 211 447769 - 447780 + F 72 -5.8 -4.30576 | opp_overlap 447768 447769 GCTTTAGAGGTAAAG CTGG CTCT CCAG TTTTGATGATAGAGG Tpen_0496 447786 - 448334 + | hypothetical protein TERM 212 448954 - 448935 - g 71 -7.8 -4.0162 | overlap 448931 GTGCTACAGGAGAAA CCCGAAGA GTTG CCTCCGGG ACAGCTACCCAGGTC TERM 213 449906 - 449894 - g 70 -4.1 -4.61231 | GCAGACGCTCAAAAA GTACA TCG CGTAC GCCAGACGCCACGTG Tpen_0497 448338 - 450419 + | MCM family protein Tpen_0498 450483 - 452702 + | DEAD/DEAH box helicase domain-containing protein Tpen_0499 454592 - 452787 - | translation initiation factor IF-2 Tpen_0500 454795 - 454604 - | ribosomal protein L24E TERM 214 455157 - 455177 + r 74 -2.4 -5.12617 | overlap 455154 CTTTCTCTCAATGTG CCTTGCGC GCAAG GCGCTACG TTTTTTACATGCTTG Tpen_0501 456596 - 455316 - | DNA primase TERM 215 455559 - 455573 + g 70 -4.2 -4.57073 | opp_overlap 455558 455559 AAGCCTGTTGACAAG GTCCCT TAC AGGAAC TTTTTCAACGACCTG TERM 216 456198 - 456210 + g 79 -5.5 -4.84359 | overlap 456168 CCTGGACTCCGGCAC GCTCT CCA GGAGC TTTTTGTAAAGCTCA TERM 217 456701 - 456714 + r 86 -9.5 -4.4078 | overlap 456700 CTTTTCACGGCTACC GGCGG TACA CCGCC TTTTGCTTGAGACGC Tpen_0502 458145 - 456850 - | GTP-binding signal recognition particle Tpen_0503 459553 - 458348 - | beta-lactamase domain-containing protein TERM 218 459221 - 459207 - G 78 -6.4 -4.59853 | GTAACCCCGTAAAAA GAGGAC AGC ATCCTC CCGGCGATAGGGTGT Tpen_0504 460020 - 459562 - | heat shock protein Hsp20 Tpen_0505 460434 - 460072 - | translation initiation factor SUI1 Tpen_0506 462156 - 460738 - | hypothetical protein TERM 219 460793 - 460829 + g 72 -8.8 -3.85698 | gap 1, overlap 460760 460795 CTTTGCGCCTTGGGG TACTGCTCGGCTTTCGC CTTC GCGAAGG-CGAGGAGTG TTTCTCGCAGAGCCG TERM 220 461062 - 461074 + g 76 -4.7 -4.72986 | opp_overlap 461057, overlap 461063 GGCGTAGAATGGGCT AGGGC TTT GCCCG TTTTTCCTGCCCCTC Tpen_0507 462219 - 462428 + | hypothetical protein Tpen_0509 462868 - 463797 + | putative agmatinase TERM 221 463987 - 463970 - g 88 -11.3 -4.20712 | TAGAATAGTCGAAAA GGTACGG CTAC CCGTACC CAAAAGAGTCAAGGC rpoP 463821 - 464009 + | DNA-directed RNA polymerase subunit P Tpen_0511 465001 - 464108 - | methyltransferase type 11 TERM 222 465059 - 465044 - H 75 -11.8 -3.11316 | TCAGCAGTGAATATA CGCGCG GAGA CGCGCG GGCGGGGGTGCCCGA Tpen_0512 465262 - 465855 + | putative RNA-processing protein Tpen_0513 465868 - 466593 + | protein of unknown function RIO1 Tpen_0514 468016 - 466619 - | phosphoesterase domain-containing protein TERM 223 467647 - 467657 + g 71 -6.8 -4.12532 | ACCCGTTGAGCCCGA CCCT GTA AGGG TTTATCTCTACGCAA rps15p 468496 - 468050 - | 30S ribosomal protein S15P Tpen_0516 468694 - 469812 + | Fis family transcriptional regulator TERM 224 470509 - 470472 - g 77 -7.7 -4.38154 | overlap 470481 ATAGGCGGGACAAAA GAAGAGAGATTCGCGGA GTAC TACGCTAAGCTCTCCTC GAAAAAACCCGTTGT Tpen_0517 469827 - 470711 + | succinyl-CoA synthetase, alpha subunit Tpen_0518 471396 - 470698 - | uridylate kinase, putative TERM 225 471510 - 471500 - H 75 -5.4 -4.6391 | AAGAACTATAGAAAA TGCT AAA AGCA GTAGAAATAAAAGAC Tpen_0519 471564 - 472796 + | peptide chain release factor 1 Tpen_0520 472793 - 473425 + | methyltransferase small Tpen_0521 473517 - 474083 + | RNA-binding S1 domain-containing protein TERM 226 474095 - 474083 - Tf 70 -10.5 -2.72991 | opp_overlap 474081 474089 GTACATGCTGAAGTA GCGCG TGG CGCGC GGTGTCTGCCTTGCG TERM 227 474477 - 474459 - gT 83 -12.4 -3.33261 | ATACCTAGAGACCAA CGCCTCCC TGA AGGAGGCG GTAGAGTTCGCAGAA Tpen_0523 475560 - 474682 - | NAD(+) kinase Tpen_0522 474106 - 474741 + | hypothetical protein Tpen_0524 476747 - 475653 - | putative circadian clock protein, KaiC Tpen_0525 477148 - 476837 - | hypothetical protein Tpen_0526 477683 - 477183 - | hypothetical protein TERM 228 477543 - 477518 - G 76 -3.1 -4.88407 | overlap 477520 TCAGGTAAGGAAAAA CCCTCGGAGCG TCAC CGCTCAGATCG AAGAACACCATTCTC TERM 229 477874 - 477900 + r 75 -11.5 -2.91276 | gap 1, opp_overlap 477872 477873, overlap 477873 GCGCAGTCAGGAAGC GCGGCGGCCACG CCCG CGGGGC-GCCGC ATTTCTAAGCCGCAG Tpen_0527 480598 - 478244 - | SMC domain-containing protein TERM 230 479906 - 479923 + g 72 -9.1 -3.93166 | overlap 479912 GTACTTCTTAGCCGC GCCTTCG AGGT CGGAGGC TTCCTTTTTTAGCCC TERM 231 480212 - 480185 - G 75 -4.2 -4.72272 | gap 1 GTGCGCGAGTAAAAA CAGCGTTACG-TA GTT TATCGAAACACTG CGGGAAAACTCGAAG Tpen_0528 480809 - 480588 - | hypothetical protein Tpen_0529 481583 - 480834 - | hypothetical protein Tpen_0530 482915 - 481629 - | actin/actin family protein Tpen_0531 484565 - 483057 - | hypothetical protein Tpen_0532 484665 - 484895 + | hypothetical protein TERM 232 485299 - 485281 - g 75 -5.3 -4.67904 | gap 1, overlap 485294 CAGGAATCGTAAAAA CGG-GGTT AGAG AACCTCCG AGGACTGCGCGAAGG Tpen_0533 484971 - 485378 + | hypothetical protein TERM 233 485392 - 485381 - f 70 -5.8 -4.24726 | opp_overlap 485381 ACAACAATCTTAAAA GTGC GCGA GCAC TTCCTGCCACGTGGC Tpen_0534 485403 - 485789 + | hypothetical protein Tpen_0535 486086 - 485805 - | DNA-binding protein Alba Tpen_0536 487889 - 486297 - | ATPase TERM 234 487849 - 487871 + g 70 -2.6 -4.78107 | opp_overlap 487822 487854, overlap 487852 487854 GCGCCGCTCAGTATA GCAGACGTGT CAG GCACGTATAC TTTTTCGTCGTGCTC Tpen_0537 488369 - 488761 + | hypothetical protein TERM 235 488739 - 488756 + T 81 -10.5 -3.6003 | overlap 488728 ACAGGGTCTACACGT CGCGCGT AACA GCGCGCG TTTAGGCCTACTTTA Tpen_0538 489372 - 488764 - | XRE family transcriptional regulator Tpen_0539 490974 - 489640 - | 4-aminobutyrate aminotransferase Tpen_0540 491035 - 491592 + | pyruvate/ketoisovalerate oxidoreductase, gamma subunit Tpen_0541 491573 - 491836 + | pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit TERM 236 492429 - 492406 - g 70 -2.2 -4.75372 | AGGAGGCATCAAAAA TCCTGCCTCC CAAG GGTGCCTGGA AGCCGCCGCTGACGC Tpen_0542 491829 - 492995 + | pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein TERM 237 493039 - 493055 + G 76 -13.7 -2.70932 | opp_overlap 493038 GAGTACATACTGAAG GGGCACG CCG CGTGCCC TGGTTGCGGCGCGAC TERM 238 493481 - 493471 - g 76 -6.8 -4.44046 | CTGAGTGTAAAGAAA GACG TAC CGTC GATCATGGTGGCGCA Tpen_0543 492997 - 493899 + | thiamine pyrophosphate binding domain-containing protein Tpen_0544 495510 - 493876 - | membrane protein-like Tpen_0545 495577 - 496350 + | RNA methyltransferase rpl10e 496533 - 497039 + | 50S ribosomal protein L10e Tpen_0547 497077 - 497784 + | hypothetical protein Tpen_0548 497840 - 498133 + | 30S ribosomal protein S26e TERM 239 498182 - 498195 + G 74 -2.3 -5.00616 | CAGAGAGAAGTTTAG CCGTG TATT CGTGG TTTTTTCAAACACGG Tpen_0549 498135 - 498767 + | hypothetical protein TERM 240 498830 - 498806 - T 70 -4.4 -4.50686 | GGAAAAAGGAAGAAA GGAATAAAAA GGGGG TTTTTATGCC AGCCCTAGCCCTCTC Tpen_0550 499003 - 498824 - | hypothetical protein TERM 241 499902 - 499940 + G 95 -19 -2.66733 | overlap 499896 499897 CGCAGACGTGGCAGG TTGCCTCCTTTCCCGGTT TCT GGCCGGGAAAGGAGGTAG TGATCTACGTTAGAA TERM 242 500413 - 500391 - g 71 -7.6 -4.07568 | overlap 500395 TGTGCGGTGTTAAAA TGAACCTGCG GCT CGCAGGCCCT AAGAACCGCCGCTAC TERM 243 500409 - 500395 - g 78 -11.4 -3.66908 | overlap 500391 CGGTGTTAAAATGAA CCTGCG GCT CGCAGG CCCTAAGAACCGCCG Tpen_0551 499337 - 500755 + | hypothetical protein Tpen_0552 502685 - 500826 - | HxlR family transcriptional regulator Tpen_0553 502827 - 503198 + | hypothetical protein Tpen_0554 503248 - 503586 + | hypothetical protein Tpen_0555 503583 - 504593 + | putative RNA methylase Tpen_0556 505591 - 504578 - | eRF1 domain-containing protein Tpen_0557 506331 - 505633 - | ribosome biogenesis protein Tpen_0558 506618 - 506394 - | hypothetical protein Tpen_0559 506636 - 508054 + | hypothetical protein Tpen_0560 508160 - 508531 + | RNAse P, Rpr2/Rpp21 subunit Tpen_0561 508524 - 509999 + | hypothetical protein Tpen_0562 510010 - 510513 + | histidine triad (HIT) protein Tpen_0563 511805 - 510534 - | translation initiation factor IF-2 subunit gamma argS 511980 - 513887 + | arginyl-tRNA synthetase Tpen_0565 515407 - 513992 - | hypothetical protein TERM 244 514328 - 514350 + g 71 -7.6 -4.07568 | overlap 514332 GTAGCGGCGGTTCTT AGGGCCTGCG AGC CGCAGGTTCA TTTTAACACCGCACA TERM 245 514332 - 514346 + g 78 -11.4 -3.66908 | overlap 514328 CGGCGGTTCTTAGGG CCTGCG AGC CGCAGG TTCATTTTAACACCG TERM 246 514843 - 514803 - G 100 -22.7 -2.94912 | overlap 514838 CTTCTAACGTAGACA GTCACCTCCTTCCCCGGCC AGA AACCGGGGAAGGAGGCAAC CTGCCAGCTCTGCGC Tpen_0567 515935 - 516189 + | hypothetical protein TERM 247 516293 - 516309 + F 70 -3.5 -4.59853 | opp_overlap 516285 516288, overlap 516295 516295 AAGTAGACCACCGGG GAGGCGG CGC CCGGCCC TTTTTAAGCAGTTGG TERM 248 517000 - 516986 - g 82 -10 -4.1043 | CCGAAAGAGCATAAA GTGGTC GGA GACCAC GATAGGCCGGACGAG leuS 516368 - 519301 + | leucyl-tRNA synthetase Tpen_0569 519542 - 519787 + | hypothetical protein Tpen_0570 520874 - 519792 - | histone deacetylase superfamily protein TERM 249 521353 - 521371 + G 78 -8.8 -4.15044 | opp_overlap 521353 GAGACCCTTCTACAA CACTCCGA TGC TCGGAGCG TTTGTTAGGGCGAGC TERM 250 521371 - 521353 - g 71 -11 -3.29829 | opp_overlap 521353 GAGACCCTTCTACAA CACTCCGA TGC TCGGAGCG TTTGTTAGGGCGAGC Tpen_0571 520961 - 521512 + | pyruvate/ketoisovalerate oxidoreductase, gamma subunit Tpen_0572 521505 - 521801 + | pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit Tpen_0573 521805 - 522989 + | pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein Tpen_0574 522995 - 523930 + | thiamine pyrophosphate binding domain-containing protein TERM 251 525728 - 525705 - g 84 -15.4 -2.90075 | GGTTGTCGAAGGAGA CCTCGCTTAC CGTT GTAAGCGAGG ATGGACAGCTTAAGC TERM 252 527781 - 527763 - g 79 -5.9 -4.77165 | overlap 527765 TCTCGGAGAACAAAA CAGCGGA TGTTC TCCGCAG GATGGACGAAATAGA Tpen_0575 524075 - 527926 + | reverse gyrase Tpen_0576 528507 - 527965 - | nicotinamide-nucleotide adenylyltransferase TERM 253 529036 - 529054 + H 93 -6 -5.27335 | CTCGCGCGCGAGCTA TCTTTCAC TAT GTGTAAGA TTTTTATTTGGAAAA Tpen_0577 529092 - 529337 + | AsnC family transcriptional regulator TERM 254 530210 - 530235 + T 74 -6.2 -4.47328 | opp_overlap 530209 CCTGCTCGAGCTAAT CCTTCTCG AAGTGTTTGA CGAGAAGG TTTTCTGCTACACTT Tpen_0578 530732 - 530205 - | hypothetical protein TERM 255 531387 - 531374 - g 72 -4.5 -4.70659 | opp_overlap 531377, overlap 531377 GGTTAGAGTGAAAAA CAAGG AAGA CCTCG CCTCCCTACTTGACG TERM 256 531393 - 531377 - g 74 -6.5 -4.46215 | opp_overlap 531377, overlap 531374 TAGAGTGAAAAACAA GGAAGAC CTC GCCTCCC TACTTGACGAGATAG Tpen_0579 531021 - 531491 + | AsnC family transcriptional regulator Tpen_0580 532873 - 532055 - | exosome complex RNA-binding protein Rrp42 TERM 257 532607 - 532595 - G 72 -4.7 -4.56597 | TCCCGGTTCGAAAAA CGGGG AAG CCACG GGAGACAGCTCGGCG Tpen_0581 533610 - 532873 - | exosome complex exonuclease 1 Tpen_0582 534320 - 533607 - | exosome complex RNA-binding protein Rrp4 Tpen_0583 535024 - 534317 - | putative RNA-associated protein Tpen_0584 535810 - 535094 - | proteasome subunit alpha TERM 258 535693 - 535709 + g 83 -13.7 -3.55444 | CAGCCTTAACGCCGA GCGCGGT CAT ACCGCGC TTTACAGCCTCAAAG Tpen_0585 536578 - 537390 + | GTPase Tpen_0586 538593 - 537403 - | AAA ATPase TERM 259 539072 - 539084 + r 70 -6.3 -4.27316 | opp_overlap 539072 CACTTGACGCAGATA CAACT AGA AGTTG TTTTACGTTGAAAAC Tpen_0587 540588 - 539428 - | tryptophanyl-tRNA synthetase Tpen_0588 540884 - 543358 + | phosphoenolpyruvate synthase Tpen_0589 543949 - 543401 - | hydrogenase maturation protease Tpen_0590 544607 - 543909 - | hypothetical protein TERM 260 544385 - 544369 - GH 74 -8.7 -3.8766 | opp_overlap 544369 GCATAGTAGAGGAAA CCGAGAA GCA CTCTCGG TTTTTTCTCCGCTAG TERM 261 544369 - 544385 + gH 100 -8 -5.26316 | opp_overlap 544369 GCATAGTAGAGGAAA CCGAGA AGCAC TCTCGG TTTTTTCTCCGCTAG TERM 262 544740 - 544756 + H 86 -3.8 -5.4477 | opp_overlap 544723 544740, overlap 544724 ATTTTTCTGATAAAA GAAAAA TATGC TTTTTC TTTTTTTAGCGATTT Tpen_0591 544852 - 546123 + | hydrogenase (NiFe) small subunit HydA TERM 263 546656 - 546638 - g 70 -12.4 -2.72344 | GCTGACTGTGAAGTA CTCGCGGA TAG CCCGCGAG GCGGGAGTGCTGATA Tpen_0592 546120 - 547910 + | nickel-dependent hydrogenase, large subunit Tpen_0593 547920 - 548711 + | hypothetical protein Tpen_0594 548708 - 550048 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Tpen_0595 550094 - 550534 + | hydrogenase expression/synthesis, HypA Tpen_0596 550534 - 551280 + | ParA/MinD family ATPase Tpen_0597 552286 - 551240 - | putative molybdenum cofactor biosynthesis protein A Tpen_0598 552452 - 553213 + | ABC transporter related Tpen_0599 553218 - 553934 + | ABC transporter related TERM 264 554127 - 554165 + G 80 -9.7 -4.16785 | CCTATGCTTTCATCC CGG-TAGCCTTTGCAGGCG GAG CGCTTGTA-GGGCTAGCCG TTTACTTTCTCGTCT Tpen_0600 553934 - 554833 + | inner-membrane translocator Tpen_0601 554839 - 555888 + | inner-membrane translocator Tpen_0602 556017 - 558131 + | CoA-binding domain-containing protein Tpen_0603 558596 - 558165 - | hypothetical protein Tpen_0604 558721 - 560058 + | hypothetical protein Tpen_0605 560433 - 560308 - | hypothetical protein TERM 265 560868 - 560834 - g 79 -7.3 -4.57073 | gap 1 TACCGTGTGGAAAAA GTACGGC-ATAAGCAC CGCG ATACTCATAGCCGTAC ATTACAGGGAAAGCA Tpen_0606 560529 - 561542 + | geranyltranstransferase Tpen_0607 561554 - 562333 + | aspartate/glutamate/uridylate kinase Tpen_0608 562918 - 562343 - | ribosomal protein L6 Tpen_0610 563933 - 563553 - | putative endoribonuclease L-PSP Tpen_0611 565161 - 563935 - | threonine dehydratase TERM 266 565199 - 565213 + r 76 -12.8 -2.57963 | overlap 565200 ATAAAAGCCTTTGCA GCGCGC GAC GCGCGC GTTGATCCTTGTGAA TERM 267 565200 - 565214 + r 83 -12.8 -3.30474 | overlap 565199 TAAAAGCCTTTGCAG CGCGCG ACG CGCGCG TTGATCCTTGTGAAG Tpen_0612 566295 - 565348 - | ribokinase-like domain-containing protein TERM 268 566420 - 566386 - H 75 -12 -2.97747 | overlap 566388 CTGGCAGAGTACATA CACTCAGTAGCGCGCG ATA CGCGCGCGAGTGCGCG AGAAAAAGGCGCCCC TERM 269 566418 - 566388 - H 72 -11 -3.04269 | overlap 566386 GGCAGAGTACATACA CTCAGTAGCGCGCG ATA CGCGCGCGAGTGCG CGAGAAAAAGGCGCC TERM 270 566441 - 566428 - H 73 -3.7 -4.83169 | AGTGCGCGAGAAAAA GGCGC CCCG GCCCC CTCCTTGCGCGCACA Tpen_0613 566537 - 568741 + | elongation factor EF-2 TERM 271 568929 - 568901 - f 93 -6 -5.22289 | gap 1 GATTAAAGAGAAAAA GCGCCCGACCTCT TCCT ACAGGT-GAGCGC GTAAGTATTATAAGC TERM 272 569359 - 569373 + G 74 -7.1 -4.29928 | TCTCCGTTGAAGATG GCACC GTAAA GGTGC TTTTCCCTGTTCCTT Tpen_0614 569007 - 570605 + | hypothetical protein Tpen_0615 570688 - 572385 + | methionyl-tRNA synthetase Tpen_0616 573693 - 572407 - | RNA modification protein Tpen_0617 575003 - 573705 - | adenosylhomocysteinase Tpen_0618 575844 - 575056 - | 5'-methylthioadenosine phosphorylase II Tpen_0619 576417 - 575902 - | tRNA-splicing endonuclease subunit alpha Tpen_0620 576595 - 577365 + | phosphoribosyltransferase Tpen_0621 577404 - 578357 + | beta-lactamase domain-containing protein Tpen_0622 579519 - 578350 - | putative DNA primase, small subunit TERM 273 578400 - 578437 + gT 71 -6.9 -4.10657 | opp_overlap 578407 578409, overlap 578401 GAACCATGTAGACAG CGAGGAAGAGGGGGACC TCCA GTTTTCCCTCTTCCACC TTTTCAAGACTGTAG Tpen_0623 580561 - 579491 - | DNA primase, large subunit TERM 274 579830 - 579849 + gr 72 -7.1 -4.19238 | opp_overlap 579830 TATCGCGCGAATGCA GGGGGGA AAGAGG TCCTCCC TTTTACCCTTAGAGG Tpen_0624 581316 - 580573 - | proliferating cell nuclear antigen PcnA Tpen_0625 581757 - 581428 - | transcription termination factor Tfs Tpen_0626 582401 - 581838 - | cytidylate kinase Tpen_0627 582505 - 582780 + | ribosomal protein L34e Tpen_0628 582843 - 584108 + | aspartyl-tRNA synthetase Tpen_0629 584110 - 584433 + | zinc finger SWIM domain-containing protein TERM 275 585178 - 585192 + G 88 -10 -4.41494 | GCGGTAGCCGTACTC CCTGTC TTG GACAGG TTTTCCTTGGAAATA Tpen_0630 584479 - 585939 + | nucleic acid binding, OB-fold, tRNA/helicase-type TERM 276 586257 - 586239 - g 81 -3.7 -5.15167 | overlap 586241 586248 GAGGAGTAAGAAAAA CGGGCAG AAGAA CAACCCG TTCTACGCCGAGGTG Tpen_0631 585991 - 586578 + | hypothetical protein TERM 277 586611 - 586601 - f 93 -8.2 -5.08088 | opp_overlap 586605, overlap 586589 586602 AACCGCCAAGAAAAA GGCG CCC CGCC CCCCGCAGGGTTTAT TERM 278 587038 - 587024 - g 72 -6.4 -4.39426 | overlap 587013 TAGACCCTGAGAAAA CTACCC CAG AGGTAG CGGCGAGGATAGCCC Tpen_0633 586939 - 587706 + | geranylgeranylglyceryl phosphate synthase-like protein Tpen_0634 587966 - 587769 - | hypothetical protein Tpen_0635 588231 - 588440 + | hypothetical protein ubiA 588565 - 589398 + | prenyltransferase Tpen_0637 590065 - 589412 - | hypothetical protein Tpen_0638 590727 - 590095 - | hypothetical protein TERM 279 590286 - 590263 - G 87 -8.1 -4.84017 | AAGTGCGGAGAAAAA CCTGGGCTT TGAATC AAGCCCCGG CATAGTCACGATGAG TERM 280 590655 - 590621 - G 77 -7.8 -4.30416 | opp_overlap 590629 AGCAGTAAGGCAAAA GTTGTTTTTAGCGAGC CGG GCTCGCCATATACTAC GTGAAGCCCAGACCT Tpen_0639 591076 - 590729 - | hypothetical protein TERM 281 591496 - 591482 - H 86 -12.8 -3.55444 | GGTTCACTCGCCAAA CGCGCG CGG CGCGCG AAAGAAAGAGATATA Tpen_0640 591559 - 593754 + | oligosaccharyl transferase, STT3 subunit Tpen_0642 594750 - 593953 - | translation initiation factor IF-2 subunit alpha rps27e 595065 - 594868 - | 30S ribosomal protein S27e rpl44e 595355 - 595068 - | 50S ribosomal protein L44e TERM 282 595504 - 595521 + r 78 -10.5 -3.53012 | AATAAGGATCTTGAT CGCGCGC GGTA GCGCGTG TTTACAAACCAGGGA Tpen_0645 595788 - 595558 - | hypothetical protein TERM 283 595844 - 595829 - H 90 -6.8 -5.055 | overlap 595830 TCAACGCGGAAAAAA CGGGAG AAAG CTCCCA CGTTTACAAACGCAG TERM 284 596216 - 596186 - g 100 -21.9 -2.71364 | gap 1 GGAGGGGTTCAATGA GCCCCGCGCGCGGG GAGG CCCG-GCGCGGGGC GAGGGAGGCGTAGCC TERM 285 596384 - 596406 + G 82 -14.8 -2.88579 | GAGGCGGGGCTCTGG GGCCCCAGCC CCG GGCTGGGGCG TCTCTCCCCGGTTGG TERM 286 596534 - 596499 - g 71 -11.9 -2.96695 | gap 2, overlap 596496 596527 596528 GCCCCTAGTAAACGA CGCCGGCC-TT-CCCGG GGGG CCGGGCAAAGGCGGGCG AGGCCTTGGCCCCAG TERM 287 596645 - 596668 + G 74 -13.8 -2.64616 | GCCCTCGCGGGGCGC CCCACCCGCC ACGT GGAGGGTGGG TGATATGAGTGAGGC Tpen_0646 595998 - 598124 + | hypothetical protein Tpen_0647 598356 - 599657 + | elongation factor 1-alpha rps10p 599708 - 600037 + | 30S ribosomal protein S10P Tpen_0649 600964 - 600362 - | ZPR1-related zinc finger protein Tpen_0650 601079 - 601432 + | hypothetical protein Tpen_0651 601410 - 602117 + | DNA polymerase beta superfamily nucleotidyltransferase Tpen_0652 602242 - 604134 + | type III restriction enzyme, res subunit Tpen_0653 604209 - 604832 + | 30S ribosomal protein S3Ae Tpen_0654 605821 - 604829 - | phosphoesterase, DHHA1 Tpen_0655 606127 - 605834 - | hypothetical protein Tpen_0656 606474 - 606133 - | prefoldin subunit beta TERM 288 606729 - 606745 + H 73 -9.3 -3.59583 | opp_overlap 606727 606725, overlap 606735 606737 CGTTGCAAGTACAGG GCACGCC GGT GGCGAGC TTTGCCAATGCTTCT Tpen_0657 606770 - 608746 + | hypothetical protein Tpen_0658 608764 - 609774 + | radical SAM domain-containing protein TERM 289 610632 - 610648 + G 70 -4.3 -4.66938 | GCAATCGTAAGGGGA CTCGGGT ACT ACACGGG TTTTGTGTTCGAGGT TERM 290 610887 - 610867 - g 70 -3.9 -4.63932 | overlap 610878 TACCTGTCAAGAAAA CCCCGGAAA TAC TCTCGGAGG CCGTAGCGGTTGCGA Tpen_0659 609834 - 611129 + | histidyl-tRNA synthetase TERM 291 611623 - 611609 - g 77 -10 -3.85817 | opp_overlap 611608 611609 AGGTTTGCCGAGAAA TACGGG TTG CCCGTA GTTTCTCTTCCCATG TERM 292 612199 - 612186 - g 70 -3.8 -4.56597 | overlap 612188 CTGTCGCCTTAAAAA TGGG GGTCGA CCCA ACACCTGTAGACACG Tpen_0660 611240 - 612280 + | bifunctional phosphoglucose/phosphomannose isomerase TERM 293 612299 - 612284 - T 75 -11.8 -2.97747 | opp_overlap 612282 612280 612284 GGCCTAGAGTAGACA CGCGCG CGTT CGCGCG AAGCGTTTTTAAGTC TERM 294 612284 - 612304 + T 72 -4.6 -4.65895 | gap 1, opp_overlap 612284, overlap 612282 612280 GGCCTAGAGTAGACA CGC-GCGCG TTCG CGCGAAGCG TTTTTAAGTCCCCCG ef1B 612931 - 612656 - | elongation factor 1-beta TERM 295 612840 - 612857 + g 76 -3.4 -4.88388 | ACCTGGTACTTCTCC GGTAGC GCGGCA GCTATC TTTTTGTACAGTTCT Tpen_0662 613431 - 613252 - | hypothetical protein Tpen_0663 613911 - 613435 - | hypothetical protein Tpen_0664 614000 - 614242 + | hypothetical protein Tpen_0665 616073 - 614229 - | hypothetical protein Tpen_0666 616421 - 617971 + | DNA topoisomerase VI subunit B TERM 296 618821 - 618844 + G 73 -11 -3.32844 | overlap 618816 GCTAGCTACTCCCGA GGCGAGGTTC CTGG GAGTCTCGCC TTCTGACATAGAACG Tpen_0667 617952 - 619091 + | DNA topoisomerase VI subunit A Tpen_0668 619365 - 619138 - | AsnC family transcriptional regulator Tpen_0669 620809 - 619709 - | hypothetical protein TERM 297 620319 - 620309 - G 71 -6.8 -4.18197 | overlap 620310 ACCGGGCAGGGAAAA CGCT GCG AGCG CGGCGAGCACCAACG Tpen_0670 621201 - 620827 - | hypothetical protein TERM 298 621209 - 621227 + H 70 -4.5 -4.54047 | overlap 621211 ATTAACATGATGCTT CTTCCGA CTTCT TCGGACG TTTTCTCTCACCTCG Tpen_0671 621323 - 621577 + | hypothetical protein Tpen_0672 621585 - 624596 + | hypothetical protein TERM 299 624896 - 624918 + G 71 -12 -2.9155 | opp_overlap 624896, overlap 624891 CAACTCTTCAAGGTA GTGCGGGAGG GCT CCTCCTGTAC TGTAGTGTTCAGGCC Tpen_0673 624578 - 625138 + | hypothetical protein Tpen_0674 625125 - 625385 + | hypothetical protein Tpen_0675 625385 - 625651 + | hypothetical protein Tpen_0676 625648 - 626214 + | hypothetical protein Tpen_0677 626215 - 626571 + | hypothetical protein Tpen_0678 627701 - 626568 - | TGS domain-containing protein TERM 300 628798 - 628775 - g 90 -4.6 -5.39755 | gap 1, overlap 628777 628778 GAGAAGTAGAAAAAA GAG-TAGTAGC ACA GCTACTAGCAC TAATGGACGGGCTCA TERM 301 628795 - 628777 - g 72 -6 -4.31563 | overlap 628775 628778 GAAGTAGAAAAAAGA GTAGTAGC ACA GCTACTAG CACTAATGGACGGGC Tpen_0679 627880 - 630036 + | AAA family ATPase, CDC48 subfamily protein Tpen_0680 631061 - 630150 - | methionine aminopeptidase Tpen_0681 631148 - 631774 + | translin family protein Tpen_0682 631771 - 632469 + | deoxyribonuclease V Tpen_0683 632487 - 632978 + | hypothetical protein Tpen_0684 633020 - 633376 + | peptidyl-tRNA hydrolase Tpen_0685 633452 - 634786 + | pseudouridylate synthase TERM 302 635390 - 635377 - g 84 -3.8 -5.24129 | overlap 635379 GCGCTTCATAAAAAA GGTG ATGGAA CACC AGGGAGTAGCCGTCT TERM 303 637049 - 637033 - g 81 -4.3 -5.10461 | CCTATCCAAGAAAAA GCCCTCT CTA AGCGAGC TACAGGAGCTTCTAC Tpen_0686 634859 - 637264 + | protein of unknown function DUF699, ATPase putative Tpen_0687 638346 - 637306 - | hypothetical protein Tpen_0688 639105 - 638428 - | cytidyltransferase-like protein Tpen_0689 639902 - 639039 - | diphthine synthase TERM 304 639299 - 639309 + gr 74 -6.8 -4.2558 | opp_overlap 639287, overlap 639306 TAACGAGAGTATTCT CGTC TAC GACG TTTTCCTGAAACCTC tfb 641022 - 640039 - | transcription initiation factor IIB Tpen_0691 641534 - 641133 - | PilT domain-containing protein Tpen_0692 642045 - 643403 + | hypothetical protein TERM 305 644073 - 644063 - f 70 -6.8 -4.01939 | GAAGCGATAATTAAA GCCT TGA AGGC GAAAGAAGGTATGGC Tpen_0693 644108 - 645769 + | thermosome Tpen_0694 645832 - 646422 + | dephospho-CoA kinase Tpen_0695 646419 - 646883 + | hypothetical protein Tpen_0696 647841 - 646891 - | ribonuclease Z Tpen_0697 648233 - 648027 - | hypothetical protein TERM 306 648102 - 648112 + g 71 -8.2 -4.07885 | TTCGTCTTCCTCGAC GCGC GGG GCGC TTTTCACGGAGGCTA TERM 307 648863 - 648919 + G 76 -12.9 -3.16564 | opp_overlap 648845 648865 648874, overlap 648871 TGACTACAGCGCAGA CATGGCAAGTAGCCTCCTTCCCTGGCT TCT GGCCGGGGAAGGAGGTGGCTGTCTACG TTGATAGAATCGAGA TERM 308 648871 - 648911 + G 100 -18.3 -2.95884 | opp_overlap 648865 648874, overlap 648863 GCGCAGACATGGCAA GTAGCCTCCTTCCCTGGCT TCT GGCCGGGGAAGGAGGTGGC TGTCTACGTTGATAG TERM 309 648908 - 648874 - g 86 -15.7 -2.75039 | opp_overlap 648871 648863, overlap 648865 CAGACATGGCAAGTA GCCTCCTTCCCTGGC TTCTG GCCGGGGAAGGAGGT GGCTGTCTACGTTGA TERM 310 649688 - 649671 - g 77 -2.5 -5.055 | overlap 649672 GGAACGCCTAAAAAA GGCGCGC GAAA GAGCGCT TAGAAAGCTGGGGGA Tpen_0698 648295 - 649722 + | hypothetical protein TERM 311 650756 - 650777 + G 71 -11.5 -3.18383 | ACTCATGGCGAGGCA GCTCGCCGT CGAG ACGGCGCGC TTCCTCAGTGGCGGT Tpen_0699 649845 - 650894 + | hypothetical protein TERM 312 651763 - 651749 - g 82 -8.6 -4.4521 | AGGATCGAAAAAGAA CCTAAG CGT CTTAGG GCTAAGGGCGGTAGC Tpen_0700 650970 - 652094 + | putative RNA methylase Tpen_0701 652920 - 652255 - | hypothetical protein Tpen_0702 653016 - 654107 + | hypothetical protein TERM 313 655346 - 655320 - g 76 -2.8 -4.88918 | GGAGGGCAAATAAAA GCTGAGGACTGG TAC CCCGTACCGAGC GTGGTCCCGATATCG Tpen_0703 654234 - 656063 + | radical SAM domain-containing protein Tpen_0704 656083 - 656559 + | hypothetical protein Tpen_0705 656723 - 657061 + | hypothetical protein Tpen_0706 657580 - 657095 - | PUA domain-containing protein Tpen_0707 657839 - 658243 + | helix-turn-helix domain-containing protein Tpen_0708 658240 - 659514 + | small GTP-binding protein Tpen_0709 659501 - 660046 + | hypothetical protein Tpen_0710 660043 - 660579 + | transcription factor TFIIE, alpha subunit Tpen_0711 660840 - 661481 + | RpiR family transcriptional regulator Tpen_0712 662252 - 661521 - | cobalt transport protein Tpen_0713 663107 - 662259 - | ABC transporter related Tpen_0714 663958 - 663104 - | ABC transporter related Tpen_0715 665180 - 663981 - | translation-associated GTPase TERM 314 664176 - 664191 + g 71 -7.6 -4.07568 | opp_overlap 664182 664183 GTTTCCGTGGGAGTC CGAGAA CTTC TTCTCG TTTTCAACGGGAAAA TERM 315 666192 - 666172 - g 74 -11.1 -3.62096 | opp_overlap 666166 CGCTATTACGGGAAA GCAGGTACC TTA GGTCCCTGC TAGCTCTCTTCTTCA Tpen_0716 665244 - 666221 + | hypothetical protein Tpen_0717 667279 - 666248 - | oxidoreductase domain-containing protein TERM 316 667350 - 667330 - R 70 -3.9 -4.66537 | overlap 667331 TTTCGCAACAGAAAA GGTGTGTGA GCA TCGCACACG GAGGGTACAGCTACT Tpen_0718 668775 - 667612 - | geranylgeranyl reductase TERM 317 668372 - 668395 + g 75 -5.2 -4.56597 | TCCAACTCTACTGTG CGGGCTCT CACGGTCC AGTGCCCG TTTTTGAACACCACC Tpen_0719 668824 - 669264 + | HxlR family transcriptional regulator Tpen_0720 670311 - 669256 - | hypothetical protein Tpen_0721 671372 - 670308 - | hypothetical protein TERM 318 671356 - 671334 - G 78 -3.2 -5.1356 | overlap 671351 TTGCATGAAGAAAAA CCCGGCGGCT ATG AGAAGCCCGG CGAGCCTCCTACGCA Tpen_0722 673962 - 671365 - | hypothetical protein Tpen_0723 674732 - 673959 - | hypothetical protein Tpen_0724 675270 - 674746 - | hypothetical protein TERM 319 675282 - 675300 + H 76 -7.5 -4.26903 | overlap 675273 TCAAGCGTAACCCCC GTTACTC TCTTC GAGTAAC TTTTAATGCGCTGGA Tpen_0725 675371 - 676084 + | ATPases involved in chromosome partitioning-like Tpen_0726 676081 - 676437 + | hypothetical protein Tpen_0727 676434 - 677612 + | type II secretion system protein E Tpen_0728 677602 - 679017 + | helicase c2 Tpen_0729 679053 - 679403 + | hypothetical protein Tpen_0730 679906 - 679409 - | hypothetical protein Tpen_0731 680690 - 679908 - | hypothetical protein TERM 320 680807 - 680823 + H 77 -2.9 -5.0925 | overlap 680807 TACAAAAAACCGATA CCCTTAA CTC TGAGGGG TTTTTCGTTTTGGCG TERM 321 681329 - 681311 - g 75 -12.4 -3.28912 | opp_overlap 681308 GCAGAGCTACACCAA GGAGGGGC GCT ACCCCTCC CCGTTTATAGACGAG TERM 322 682458 - 682432 - g 71 -7.2 -4.21827 | opp_overlap 682436, overlap 682433 682436 CGAAACACGGGAAAA CGTACAGGGAGG TTG CCTCGCTGTTCA TGGTCGGAGTAGCTC Tpen_0732 681045 - 682505 + | hypothetical protein TERM 323 682864 - 682877 + G 70 -4.5 -4.5442 | overlap 682824 GGCTACGTAGGCGGG CTCGT TGTG ACGGG TTTTCTCGTTCAGAA Tpen_0733 682591 - 682920 + | hypothetical protein Tpen_0734 682967 - 683440 + | ribosomal protein L13 Tpen_0735 683746 - 683558 - | hypothetical protein Tpen_0736 683881 - 684183 + | like-Sm ribonucleoprotein, core TERM 324 684954 - 684941 - g 70 -3.8 -4.63527 | GGAGGAGGTGAAAAA GCTC GTAAAG GAGC ACGCCGCTAGCATCA Tpen_0737 684219 - 685439 + | S-adenosylmethionine synthetase Tpen_0738 687424 - 685436 - | hypothetical protein TERM 325 685652 - 685630 - G 80 -14.8 -2.73364 | GGGCGACCGGAACCA CGCCGAGCGG GAG CCTCTCGGCG GCCCCGCGCGCCGCC Tpen_0739 688396 - 687491 - | protein of unknown function RIO1 Tpen_0740 689151 - 688435 - | metallophosphoesterase Tpen_0741 689669 - 689148 - | methyltransferase type 11 TERM 326 693429 - 693408 - g 87 -15.1 -3.30441 | opp_overlap 693407 693427 TATTAGCCCCGACAA GGGCGCCGC CGTA GCGACGCCC GTTGGTAGCCTGCCG Tpen_0742 689824 - 694959 + | hypothetical protein Tpen_0743 695079 - 695831 + | Rad51-like Tpen_0744 695824 - 696345 + | hypothetical protein TERM 327 697929 - 697917 - gf 81 -10.5 -3.62046 | GCAGGTGTCGAAGAA GCCGC CGA GCGGC GAGTACCTGGCGAAG TERM 328 698052 - 698070 + GF 70 -10.2 -3.15544 | overlap 698055 CCTCCCGGCGCTGGC GAACCCCC GCG GGGGGTGC TTCCTGAAGGTAACC TERM 329 698055 - 698067 + GF 70 -10.5 -2.78216 | overlap 698052 CCCGGCGCTGGCGAA CCCCC GCG GGGGG TGCTTCCTGAAGGTA Tpen_0745 696409 - 698241 + | hypothetical protein Tpen_0746 698214 - 698915 + | hypothetical protein TERM 330 698901 - 698930 + F 72 -5.6 -4.56597 | overlap 698902 698922 GCTGCCAGGGTTGTA ACCGGCCGGAAG TAGGCT TTTCGGGCCGGG TTTTTGCCGGGCGCC TERM 331 698984 - 699002 + G 72 -4.4 -4.56597 | overlap 698986 TCCCGGGCTTCGCCC CGTCGCCG CTA CGGCAAAG TTTTTCCGCACCGAC Tpen_0747 698961 - 699539 + | hypothetical protein Tpen_0748 699520 - 700161 + | AMMECR1 domain-containing protein TERM 332 700392 - 700356 - g 72 -9.5 -3.76839 | overlap 700391 CAAGCTCAAGGTAAA GCTCTTCAAGCTGAAAG ACC CATCCAACTTCAAGAGC TACCTCGAGCAGCTA Tpen_0749 700237 - 701049 + | hypothetical protein Tpen_0750 701123 - 702928 + | ATP-dependent DNA ligase Tpen_0751 703494 - 702925 - | hypothetical protein TERM 333 703107 - 703129 + g 80 -4.8 -5.00616 | CGAGGTCCTCGTCCT GCCTCTTGAA CCC TTCGAGGAGC TTTTTTACGAAGAAG Tpen_0752 703548 - 704480 + | ribokinase-like domain-containing protein Tpen_0753 704592 - 704933 + | hypothetical protein TERM 334 706678 - 706662 - g 71 -8 -4.09685 | GCCGAGTCGGGAAAA CTCACC GTGAG GGTGAG GGGGCAGGGACAGTA Tpen_0754 704982 - 706808 + | threonyl-tRNA synthetase Tpen_0755 706805 - 707998 + | radical SAM domain-containing protein Tpen_0756 708044 - 708295 + | hypothetical protein Tpen_0757 709378 - 708350 - | glyceraldehyde-3-phosphate dehydrogenase, type I TERM 335 709644 - 709632 - H 70 -4.8 -4.58395 | CGTAGCGGTTAAAAA GAGC TTTGT GCTC AGACCTGCACGAGTA TERM 336 709963 - 709985 + H 76 -10.5 -3.33492 | ACTGGTTAGCACGTT GCGCTTCGC CACGC GCGATGCGC TTATAAGCTCGGTAC Tpen_0758 710049 - 711326 + | metallophosphoesterase Tpen_0759 711359 - 712060 + | hypothetical protein Tpen_0760 714635 - 712011 - | redoxin domain-containing protein Tpen_0761 715062 - 714637 - | hypothetical protein Tpen_0762 715997 - 715191 - | undecaprenyl diphosphate synthase Tpen_0763 716035 - 716763 + | deoxyribose-phosphate aldolase Tpen_0764 716841 - 717881 + | hypothetical protein Tpen_0765 717888 - 719054 + | acetyl-CoA acetyltransferase Tpen_0766 719057 - 719464 + | hypothetical protein Tpen_0767 719468 - 719794 + | hypothetical protein TERM 337 719788 - 719804 + T 70 -7.3 -4.07687 | overlap 719791 TATGCTCGTAGTCCA GGAGTAG TTG CTACTTC TTTTCGAGAAGCGCT Tpen_0768 721129 - 719798 - | Fmu (Sun) domain-containing protein Tpen_0769 721988 - 721146 - | hypothetical protein Tpen_0770 722126 - 722872 + | hypothetical protein Tpen_0771 723322 - 722876 - | hypothetical protein Tpen_0772 723378 - 723908 + | hypothetical protein TERM 338 724737 - 724718 - g 74 -13.6 -2.63073 | overlap 724717 724715 CTCCGGGAAGAAGAT CGGAGACG TTAA CGTCTCCG TGCTGAAGGAGAAGG Tpen_0773 723975 - 725204 + | phosphoglycerate kinase TERM 339 725268 - 725283 + G 73 -3.2 -4.72272 | overlap 725269 TCGAGGGAGTATGAG CGACCA GGAG TGGTCC TTTTTCCTAAAGGAG Tpen_0774 725263 - 726024 + | hypothetical protein TERM 340 726414 - 726393 - g 74 -2.3 -4.89567 | gap 1, opp_overlap 726397, overlap 726388 726397 GTTGAAAATATAAAA GCAT-CCTTT AGG AAGGGTATGC TCGAGGTAACGGTTC Tpen_0775 726036 - 726467 + | heat shock protein Hsp20 Tpen_0776 727216 - 726470 - | helix-turn-helix domain-containing protein Tpen_0777 728141 - 727287 - | type II secretion system protein TERM 341 728185 - 728174 - R 74 -5.8 -4.51224 | opp_overlap 728173 AACACGAATAATAAA CCTC GCGC GAGG CCTTTTCCCTGCAAG Tpen_0778 729701 - 728202 - | amidohydrolase 3 Tpen_0779 730567 - 729689 - | hypothetical protein Tpen_0780 730978 - 730574 - | hypothetical protein Tpen_0781 731014 - 732885 + | thiamine pyrophosphate binding domain-containing protein TERM 342 733251 - 733265 + G 71 -7.8 -4.07568 | CCTTGAAGGGGCTGG GCGCGA GGG TCGTGC TTTTAGAGGCGGACG Tpen_0782 732890 - 733489 + | pyruvate ferredoxin/flavodoxin oxidoreductase Tpen_0783 734596 - 733469 - | monooxygenase, FAD-binding TERM 343 733858 - 733846 - G 72 -4.7 -4.71426 | CTCCCAGTAAGAAAA GCCTG TCC CCGGC GTAGACGTCGACCAT Tpen_0784 735228 - 734617 - | PadR-like family transcriptional regulator Tpen_0785 737153 - 735267 - | hypothetical protein Tpen_0786 737252 - 738865 + | lysyl-tRNA synthetase Tpen_0787 739007 - 739372 + | hypothetical protein Tpen_0788 741017 - 739428 - | chemotaxis sensory transducer TERM 344 740259 - 740273 + g 72 -5.7 -4.43832 | TTCAAGTTTCTTAGC CTGCT CTTCC AGCAG TTGTTTTCTCTCTTC Tpen_0789 742595 - 741183 - | hypothetical protein TERM 345 741963 - 741994 + g 76 -12.2 -3.4072 | opp_overlap 741961 GCCACTAGGAAAGGC CGCGAGCGTGGCTG GCAA CTGCCACGGTTGCG TTGTGCTGAAACGTA TERM 346 742741 - 742766 + H 75 -11.9 -3.02144 | ACTCTTAGGCGCGCG CCTCTACGAGG CGCG CCTAGTAGAGG TGTTAGACGCAATCG Tpen_0790 742766 - 742894 + | hypothetical protein TERM 347 745101 - 745127 + G 76 -13 -3.12895 | opp_overlap 745100 745107, overlap 745098 745096 TAGCGCTAAACCCAG GGGAAACCTTCG AAA CGGAGGTGTCCC TGTCTTGGTGAACCC Tpen_0791 743342 - 745138 + | glycoside hydrolase family protein Tpen_0792 745135 - 746796 + | starch synthase Tpen_0793 747201 - 746770 - | hypothetical protein TERM 348 746806 - 746821 + g 73 -3.2 -4.7629 | CTGTAGAGCCGATTT GACGCT TTCT AGCTTC TTTTTGAGTTCCTCG Tpen_0794 747959 - 747207 - | hypothetical protein Tpen_0795 750758 - 747975 - | cytochrome c biogenesis protein, transmembrane region TERM 349 751888 - 751864 - g 74 -6.3 -4.52589 | TGGTTCGAGAGAAAA GGTAGGCCCAG GTC CCGGGTGTACC TCTACACGAGCAGGG Tpen_0796 750934 - 752115 + | hypothetical protein Tpen_0797 752143 - 752553 + | hypothetical protein Tpen_0798 752550 - 753203 + | phage SPO1 DNA polymerase-related protein Tpen_0799 753398 - 754012 + | hypothetical protein Tpen_0800 754439 - 754831 + | hypothetical protein Tpen_0801 755564 - 754821 - | hypothetical protein Tpen_0802 755825 - 755652 - | hypothetical protein TERM 350 755860 - 755876 + H 84 -10.9 -3.73224 | opp_overlap 755848 755847 AAGCTGGCCAGTGTT TGCTAGC ACT GCTAGCA TTTACTAGCAAGTAC TERM 351 756050 - 756073 + H 72 -8.8 -3.85698 | overlap 756051 GCCCAATTACCGTTC AGCGGGGAGT ATTC ATTCCCCGCG TTTGTAAACCGGGGA TERM 352 756051 - 756072 + H 78 -12.3 -2.91276 | overlap 756050 CCCAATTACCGTTCA GCGGGGAGT ATTC ATTCCCCGC GTTTGTAAACCGGGG TERM 353 756099 - 756082 - H 74 -9.8 -3.53012 | CCCCGCGTTTGTAAA CCGGGG AGGACG CCCCGG CTTCAACACTTACCC TERM 354 756645 - 756667 + H 90 -14.8 -2.87132 | overlap 756649 756652 GAGGCGGGGCTCTGG GGCCCCAGCC CCG GGCTGGGGCG TCTCTCCCCAACCGG Tpen_0804 757603 - 758406 + | hypothetical protein TERM 355 758481 - 758465 - f 73 -9.4 -3.6215 | opp_overlap 758460 758460 GCAACGCACGCTAAA CTCGCG TAGCG CGCGAG TTAAAGTCTCTTGTC TERM 356 758819 - 758834 + G 75 -9 -4.08394 | AACAGGTCGTTTACG CGCTCT GTTG AGAGCG TTTTACCGGAACTCT Tpen_0805 758576 - 759463 + | type II secretion system protein Tpen_0806 760799 - 759474 - | hypothetical protein TERM 357 760386 - 760422 + g 74 -11.5 -3.53761 | opp_overlap 760385, overlap 760376 GTACTCCAGGAACAG GGGCTCCGGGTTATCGC GCC GCAGTAGCCTGTAGCCC TTTAAGAGCACCTTC Tpen_0807 761785 - 760802 - | hypothetical protein TERM 358 763140 - 763130 - g 79 -6.8 -4.66953 | TCAAGAGGTTAAAAA TCGG GGA CCGA ATAGTCAGGAGGGTT Tpen_0808 761956 - 763488 + | type II secretion system protein E Tpen_0809 764325 - 763474 - | protein of unknown function Met10 Tpen_0810 764671 - 766014 + | phosphomannomutase Tpen_0811 766062 - 766403 + | hypothetical protein TERM 359 766410 - 766395 - g 74 -2.4 -5.00884 | overlap 766397 766405 AGGTGGGCGAAAAAA GAGGAG TAAA CCCCGC CAGGCTAGCGGAGGA TERM 360 766423 - 766405 - g 72 -8.8 -3.89346 | overlap 766397 766395 AAAAAGAGGAGTAAA CCCCGCCA GGC TAGCGGAG GAGCTGGACATCGGC Tpen_0812 766382 - 766732 + | V-type H+-transporting ATPase subunit E Tpen_0813 766729 - 767376 + | H+-transporting two-sector ATPase, E subunit Tpen_0814 767651 - 767373 - | hypothetical protein TERM 361 768172 - 768148 - g 76 -2.8 -4.92783 | gap 1, opp_overlap 768149, overlap 768149 768150 AAGGTACCAGAAAAA GTGCTGAAAGG CAAG CCCTTCGGC-C TCTAATCGTGCGTGA Tpen_0815 767806 - 768177 + | hypothetical protein gltX 769883 - 768174 - | glutamyl-tRNA synthetase Tpen_0817 770405 - 771853 + | prolyl-tRNA synthetase Tpen_0818 772320 - 771850 - | ribosomal-protein-alanine acetyltransferase Tpen_0819 773101 - 772331 - | beta-lactamase domain-containing protein TERM 362 772819 - 772802 - G 83 -7.7 -4.57073 | gap 1, overlap 772806 CATCCTCTCGAAAAA CCTACGCG TCC CGCG-AGG GCCCACTACTTCTAC Tpen_0820 773975 - 773139 - | xylose isomerase domain-containing protein Tpen_0821 774143 - 775339 + | alcohol dehydrogenase Tpen_0822 775381 - 776292 + | creatininase Tpen_0823 776372 - 777391 + | glyoxylate reductase Tpen_0824 777433 - 778218 + | GTP-binding protein, HSR1-related Tpen_0825 779051 - 778200 - | N-glycosylase/DNA lyase TERM 363 778910 - 778922 + g 80 -4.7 -4.87273 | opp_overlap 778902, overlap 778911 CGTAGAAGCCCCCCT CCGGG AAG CCCGC TTTTTCTAGGATCTT Tpen_0826 780422 - 779064 - | phosphoglucomutase/phosphomannomutase alpha/beta/subunit Tpen_0827 781585 - 780419 - | nucleotidyl transferase TERM 364 782041 - 782017 - H 78 -8.5 -4.23892 | CCGAAGCACTTAAAA CGGGCGCTTCG TCA CAAAGCACGCG TATGGAGGATCTAGA Tpen_0828 782043 - 782561 + | hypothetical protein Tpen_0829 782611 - 783432 + | hypothetical protein TERM 365 784560 - 784542 - g 70 -11.8 -2.74563 | opp_overlap 784554, overlap 784546 TGGAGACTGTAAGGA TGAAGGCT CCG AGCCTTCA GGAAAGGCTTATCGG Tpen_0830 783524 - 784756 + | hypothetical protein Tpen_0831 785621 - 784764 - | hypothetical protein Tpen_0832 785725 - 786594 + | band 7 protein Tpen_0833 787292 - 786609 - | hypothetical protein Tpen_0834 787431 - 787294 - | hypothetical protein Tpen_0835 787781 - 787428 - | hypothetical protein Tpen_0836 788073 - 787768 - | regulatory protein, ArsR Tpen_0837 788959 - 788183 - | fructose-bisphosphate aldolase Tpen_0838 789339 - 788956 - | hypothetical protein Tpen_0839 790315 - 789356 - | xylose isomerase domain-containing protein TERM 366 790853 - 790863 + G 71 -6.8 -4.25104 | opp_overlap 790853 GCTAGCCGGCGTAAA GCTC CCC GAGC TTTTGCTAAGCCCGC Tpen_0840 790347 - 791228 + | auxin efflux carrier Tpen_0841 792212 - 791253 - | peptidase T2, asparaginase 2 Tpen_0842 792367 - 792537 + | hypothetical protein TERM 367 792546 - 792563 + F 74 -6.3 -4.54449 | opp_overlap 792529, overlap 792548 GTTCTAAGAGCAACC TGCCTAG AACC CTAGGTA TTTTCTCTACACTCT TERM 368 793406 - 793386 - g 72 -9.7 -3.6422 | overlap 793384 GAGGCTGCTAAAAGA GTGCTCGAC GGT GTCGAGAAC AAGACAGTAGCCGTG Tpen_0843 792771 - 794030 + | Glu/Leu/Phe/Val dehydrogenase, C terminal Tpen_0844 794617 - 794027 - | hypothetical protein Tpen_0845 795138 - 794662 - | hypothetical protein Tpen_0846 795243 - 795974 + | membrane protein-like Tpen_0847 796844 - 796221 - | methyltransferase small Tpen_0848 796873 - 798165 + | asparaginyl-tRNA synthetase Tpen_0849 798310 - 798555 + | FeoA family protein TERM 369 798617 - 798600 - g 71 -7.7 -4.09739 | opp_overlap 798600 CCAATGTCGGTAAAA GCACGCT GTTC AACGTGC TTGTAGGGGCTCATA TERM 370 800390 - 800376 - g 80 -10 -3.94746 | TCATAGCTAAGGAAA GCGTTG CCT CAACGC TAATAATCGCCACCG Tpen_0850 798548 - 800635 + | ferrous iron transport protein B TERM 371 801211 - 801169 - g 87 -14.1 -3.32844 | opp_overlap 801174 TCCTGGAGCTGAGAA CTCTCCTCGTACCCGGGCT TCTAG AGCCCGCGCACCTGGAGAG GATAGCGCGTCAGCT TERM 372 801249 - 801216 - g 73 -12.6 -2.85668 | opp_overlap 801238 801239, overlap 801239 CACCTGGAGAGGATA GCGCG-TCAGCTCTCA GAAA TG-GAGCTGAGCGCGC AGCGCATAGCATATG Tpen_0851 800637 - 801434 + | anaerobic ribonucleoside-triphosphate reductase activating protein Tpen_0852 803299 - 801452 - | major facilitator transporter Tpen_0853 803531 - 804607 + | tRNA-modifying enzyme Tpen_0854 804624 - 805346 + | hypothetical protein Tpen_0855 805403 - 806125 + | hypothetical protein Tpen_0856 806988 - 806134 - | 2-oxoacid ferredoxin oxidoreductase subunit beta Tpen_0857 808694 - 806985 - | pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein TERM 373 807459 - 807445 - G 71 -12.8 -2.60309 | overlap 807440 807444 GCGTAAACAAGAGAG CCCGGG GTT CCCGGG AAGACCATCGGGGAA TERM 374 809223 - 809210 - g 83 -9.5 -4.30987 | AGCCTTCAGAAGAAA CGGGG TAAC CCCCG GCGTGCTTCACGTGA Tpen_0858 808746 - 809243 + | hypothetical protein Tpen_0859 810481 - 809240 - | quinolinate phosphoribosyl transferase Tpen_0860 810877 - 810533 - | regulatory protein, ArsR Tpen_0861 813174 - 810940 - | DEAD/DEAH box helicase domain-containing protein TERM 375 811293 - 811309 + g 78 -8.7 -4.11692 | GGGCGTGTTCTACTG CGTGGAA GGC TTCCGCG TTTTGAAGCTCGCTC Tpen_0862 813280 - 814605 + | TIP49-like Tpen_0863 815509 - 814664 - | putative phage repressor TERM 376 816516 - 816527 + G 75 -3.6 -4.76644 | overlap 816505 CTACTCCAACGAATG GCTC TACA GGGC TTTTTGGTGGATGTT Tpen_0864 815611 - 816753 + | peptidase M50 Tpen_0865 817591 - 816884 - | beta-lactamase superfamily hydrolase Tpen_0866 818007 - 817612 - | holliday junction resolvase TERM 377 818063 - 818049 - R 71 -9.2 -3.53722 | GCCACACCTATATAA GCGCAC AGC GCGCGC GTCTAAGTCTTCATC Tpen_0867 819127 - 818066 - | hypothetical protein Tpen_0868 819439 - 819140 - | hypothetical protein Tpen_0869 819522 - 819836 + | AsnC family transcriptional regulator Tpen_0870 820914 - 820027 - | hypothetical protein Tpen_0871 821240 - 822412 + | AAA ATPase Tpen_0872 822860 - 822390 - | pyruvoyl-dependent arginine decarboxylase Tpen_0873 824431 - 822959 - | hypothetical protein TERM 378 823292 - 823274 - G 83 -13.8 -3.36557 | overlap 823275 AACGAGGTTAAGCAA CGCGCCGG CGA CCGGCGCA TAGAGGCCGAGCCAC TERM 379 823291 - 823275 - G 81 -15.1 -2.61452 | overlap 823274 ACGAGGTTAAGCAAC GCGCCGG CGA CCGGCGC ATAGAGGCCGAGCCA Tpen_0874 824450 - 824668 + | hypothetical protein TERM 380 824698 - 824715 + T 73 -11.3 -2.72043 | opp_overlap 824698, overlap 824697 TTCTTGGTTTGTAAA CCGGGAA GCGT TTCCCGG GTTTAGCGCGCGATT TERM 381 824715 - 824698 - T 82 -11.3 -3.53012 | opp_overlap 824697 824698 TTCTTGGTTTGTAAA CCGGGAA GCGT TTCCCGG GTTTAGCGCGCGATT Tpen_0875 825382 - 824843 - | putative methylase Tpen_0876 825692 - 825384 - | hypothetical protein Tpen_0877 826485 - 825745 - | ERCC4 domain-containing protein TERM 382 826935 - 826964 + G 86 -14.3 -3.28791 | opp_overlap 826934 826933 GTAAAGGAGGAAACG GTCGAAGAGGGTC TCGC GTCCCTCTTCGGC TTCTAGGAAGACGGT rpl12p 826644 - 826970 + | 50S ribosomal protein L12P Tpen_0879 826982 - 827665 + | peptidase A24A, prepilin type IV Tpen_0880 828538 - 827855 - | triosephosphate isomerase Tpen_0881 828636 - 829760 + | radical SAM domain-containing protein TERM 383 830531 - 830549 + G 73 -12.4 -3.02144 | opp_overlap 830484 CTCGCGGAGCGCGGG CTGCGGGC TGA GCTCGCAG TGTTCGACGAGGTCA Tpen_0882 829739 - 830761 + | diphthamide biosynthesis protein Tpen_0883 831588 - 830713 - | xylose isomerase domain-containing protein Tpen_0884 831696 - 832832 + | KH domain-containing protein Tpen_0885 832839 - 834734 + | DNA topoisomerase TERM 384 834989 - 835003 + G 74 -11.4 -3.57144 | opp_overlap 834979 834982 834981 CTAAACAGCGACGAC GCCGTC CGG GACGGC TTTGCGGATAAGGAG Tpen_0886 834761 - 835354 + | hypothetical protein TERM 385 835418 - 835394 - g 84 -15.1 -2.87211 | AGCTTTCCCTAGAGA TCGTAGCCTCC GGT GAAGGCTACGA AGTAGCGCTGAAAGT Tpen_0887 835351 - 835959 + | hypothetical protein Tpen_0888 835956 - 836924 + | phosphoesterase, DHHA1 Tpen_0889 837451 - 836921 - | amino acid-binding ACT domain-containing protein Tpen_0890 837532 - 838914 + | tryptophan synthase subunit beta Tpen_0891 838966 - 839934 + | mevalonate kinase Tpen_0892 840043 - 841713 + | hypothetical protein Tpen_0893 842012 - 843928 + | acetyl-CoA synthetase Tpen_0894 845562 - 843946 - | glycerol kinase TERM 386 845635 - 845622 - R 73 -9.5 -3.65002 | overlap 845612 ATGAAGTACAGATAA CCCGG TTAA CCGGG CCTGCCGTACCTACT Tpen_0895 846254 - 845646 - | hexapaptide repeat-containing transferase Tpen_0896 846392 - 846727 + | sec-independent translocation protein mttA/Hcf106 Tpen_0897 846779 - 847753 + | Fis family transcriptional regulator Tpen_0898 848289 - 847762 - | cytidyltransferase-like protein Tpen_0899 848322 - 848963 + | ribonuclease HII Tpen_0900 848997 - 849350 + | hypothetical protein Tpen_0901 849510 - 850469 + | ROK family protein cysS 851900 - 850476 - | cysteinyl-tRNA synthetase Tpen_0903 851960 - 852850 + | hypothetical protein Tpen_0904 853556 - 852807 - | ABC transporter related Tpen_0905 854214 - 853558 - | polar amino acid ABC transporter, inner membrane subunit Tpen_0906 855105 - 854266 - | extracellular solute-binding protein Tpen_0907 855241 - 855927 + | hypothetical protein Tpen_0908 856807 - 855932 - | MRP protein-like Tpen_0909 857419 - 856865 - | peptidase M50 TERM 387 857529 - 857506 - H 70 -6.7 -4.11216 | GCGGTAGCTTTAAAA CGCTTAGAG GAGGAA CTCTACGCG TGAAGCTGACGAGAA Tpen_0910 857529 - 858611 + | extracellular solute-binding protein Tpen_0911 859410 - 858619 - | binding-protein-dependent transport systems inner membrane component Tpen_0912 860170 - 859400 - | binding-protein-dependent transport systems inner membrane component Tpen_0913 861258 - 860173 - | ABC transporter related Tpen_0914 861876 - 861430 - | hypothetical protein Tpen_0915 862983 - 861919 - | hypothetical protein TERM 388 863656 - 863641 - g 83 -5.4 -4.9218 | GACCGAGGAGAAAAA CCTGTA CTCG CACAGG GCTAAAGCCGCGAGA Tpen_0916 863150 - 863713 + | RdgB/HAM1 family non-canonical purine NTP pyrophosphatase Tpen_0917 866078 - 863700 - | hypothetical protein Tpen_0918 866585 - 866085 - | hypothetical protein Tpen_0919 867831 - 866596 - | hypothetical protein TERM 389 867251 - 867262 + g 84 -2.2 -5.48303 | GTGAGATTGCTCTTA GCGA ATAC TTGC TTTTTTTCGACTTCT Tpen_0920 868381 - 867896 - | hypothetical protein Tpen_0921 869251 - 868412 - | hypothetical protein TERM 390 868473 - 868496 + g 83 -13.9 -3.3363 | opp_overlap 868457 868456, overlap 868467 AGGCCGTCTGCCGGC GCTCCCTCG GGCGCG CGAGGGAGC TTGACTTGTTGTTGG Tpen_0922 870808 - 869270 - | hypothetical protein TERM 391 870009 - 870019 + g 71 -6.8 -4.18197 | overlap 870004 TAGCCCCACGGCGTC GTCG CGG CGAC TTTTACCTGGACGCT Tpen_0923 871984 - 870998 - | PP-loop domain-containing protein TERM 392 871369 - 871385 + g 79 -13.7 -3.08934 | overlap 871370 AGAGCGGCTTTATGC GGGGGAC GAG GTCCCCC TCTTCCGCTCTCTCA TERM 393 871970 - 871942 - G 72 -9.5 -3.76224 | CCCCCAGGTAGGAAA CGTACACAGACGC CCT GCGCCCGCACACG TAGCACTTGGCCAAC Tpen_0924 872219 - 871998 - | thiamineS protein Tpen_0925 872345 - 872683 + | hypothetical protein Tpen_0926 873527 - 872745 - | phosphoesterase, putative Tpen_0927 873638 - 874924 + | hydroxymethylglutaryl-CoA reductase, degradative TERM 394 875278 - 875289 + F 70 -5.8 -4.20918 | CCCCTCGACACTCCC CTCC TCCA GGAG TTTCTTCAGCTTGGA Tpen_0928 875300 - 875992 + | abortive infection protein Tpen_0929 876034 - 876567 + | hypothetical protein TERM 395 876577 - 876601 + T 74 -2.8 -5.00765 | gap 1, overlap 876569 876580 ATCTAGCGCGCGGCT TGCGCCTGAGC TTTT GCTCTGGC-TA TTTTTCTCATTAGTT TERM 396 876580 - 876599 + T 81 -9.2 -4.11322 | overlap 876569 876577 TAGCGCGCGGCTTGC GCCTGAGC TTTT GCTCTGGC TATTTTTCTCATTAG Tpen_0930 879230 - 876564 - | ATP-dependent helicase Tpen_0931 879501 - 881120 + | aminopeptidase Tpen_0932 881213 - 884776 + | glycoside hydrolase family protein Tpen_0933 884831 - 886465 + | hypothetical protein TERM 397 886463 - 886480 + T 79 -2.1 -5.28481 | GGAGTCTCTCCGGCT TAAAAAA CTAG TTTTTTG TTTTTTCCTTCCATG Tpen_0934 887442 - 886462 - | hypothetical protein Tpen_0935 888625 - 887495 - | FAD dependent oxidoreductase Tpen_0937 889360 - 888884 - | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Tpen_0938 890756 - 889347 - | hypothetical protein TERM 398 890603 - 890590 - G 75 -9.5 -3.93695 | opp_overlap 890590 CCTATCATGCAGAAA GGGCC CTGG GGCCC TTGCTCCCCGCGCCG TERM 399 890859 - 890843 - H 71 -2.3 -5.01732 | AAGGCTTGGAAAAAA TCCAT GCATACG ATGGA AAAGGATTTATTCCC TERM 400 891155 - 891141 - g 71 -7.1 -4.10657 | GCATAGGGGTGAAAA GCCTG AGCAG CAGGC TCGAGGCAGAGCTCG Tpen_0939 890897 - 891331 + | hypothetical protein Tpen_0940 891372 - 891884 + | hypothetical protein Tpen_0941 891922 - 892665 + | beta-lactamase domain-containing protein TERM 401 892743 - 892705 - f 86 -7.3 -4.99043 | gap 1, overlap 892706 TCTTTATAAAGAAAA TCTAGCCGCC-CGCCCGA ATTT CCGGGCGCGGGGACCAGC CCCGCGTAGCTCAGC TERM 402 892742 - 892706 - f 81 -10.8 -3.58703 | gap 1, overlap 892705 CTTTATAAAGAAAAT CTAGCCGCC-CGCCCGA ATTT CCGGGCGCGGGGACCAG CCCCGCGTAGCTCAG TERM 403 893080 - 893090 + F 75 -5.4 -4.60041 | AACATTAATATCAGG GCTT ACT AAGC TTTTTCCCAATGGAT Tpen_0942 893100 - 894023 + | signal transduction protein Tpen_0943 895250 - 893994 - | hypothetical protein TERM 404 894072 - 894090 + g 74 -11 -3.51032 | opp_overlap 894072 CCTCGAGAGCACTAA GTTCAGGG GTA CCCTGAGC TTCTCCTTCAGCGCT Tpen_0944 896146 - 895301 - | aldo/keto reductase Tpen_0945 896204 - 896782 + | PEBP family protein Tpen_0946 896825 - 897256 + | hypothetical protein Tpen_0947 897246 - 899438 + | hypothetical protein TERM 405 899605 - 899561 - g 71 -10.5 -3.56142 | overlap 899557 TGGACTAAGAAGGAA GTCGTCGTCGAGCGCCTCGAG AAG CTCGGGGTGCTCGGCAAGGTC TACGCGGTTGGGACT Tpen_0948 899489 - 900871 + | thymidylate synthase-like TERM 406 900867 - 900883 + T 74 -2.2 -5.1417 | overlap 900868 ACGTCCAGGACGCCG TCTAGC CCGTA GCTAGC TTTTTGATTTTCTCG Tpen_0949 902106 - 900868 - | SufS subfamily cysteine desulfurase TERM 407 903539 - 903521 - g 72 -8.8 -3.86346 | overlap 903522 903524 CGAGGGCTTCATAAA GCACCCCA AGC TGGGGTGG ATCGAGGTTTTCCCC TERM 408 903538 - 903522 - g 71 -12.3 -2.91593 | overlap 903521 903524 GAGGGCTTCATAAAG CACCCCA AGC TGGGGTG GATCGAGGTTTTCCC pheS 902211 - 903752 + | phenylalanyl-tRNA synthetase subunit alpha pheT 903759 - 905429 + | phenylalanyl-tRNA synthetase subunit beta TERM 409 905530 - 905507 - gT 77 -12.4 -2.82635 | gap 1, opp_overlap 905521 AGGGCCAGGAGGATA GCCG-AGGCCC TCA GGGCCCGCGGC GCCTCTCTCGGGGAG Tpen_0952 905399 - 906127 + | HAD family hydrolase Tpen_0953 906453 - 906124 - | MarR family transcriptional regulator Tpen_0954 907036 - 906446 - | hypothetical protein Tpen_0955 907171 - 907524 + | hypothetical protein Tpen_0956 907539 - 907973 + | water stress/hypersensitive response protein TERM 410 907991 - 907980 - T 74 -3 -4.88646 | overlap 907971 907970 AAAAAGTAAAACAAA GTTT TATC AAAC AATAACATCATTATA Tpen_0957 908694 - 908077 - | hypothetical protein TERM 411 910455 - 910445 - g 74 -6.8 -4.35483 | GCGGAGCAGAATAAA GGAG TAC CTCC AAGGCTTCAACGTCG TERM 412 910704 - 910689 - g 70 -4 -4.57882 | gap 1 GCCAAGAAGAAGAAA GCCA-TC TAC GACTGGC GCCTAAAGAAGTGGA Tpen_0958 908835 - 910724 + | AAA ATPase Tpen_0959 910816 - 911061 + | AbrB family transcriptional regulator Tpen_0960 911289 - 911570 + | hypothetical protein Tpen_0961 911567 - 913123 + | hypothetical protein Tpen_0962 913240 - 913404 + | hypothetical protein Tpen_0963 913469 - 914344 + | hypothetical protein TERM 413 914352 - 914334 - f 81 -6.6 -4.62708 | AACACAGAAAAAGAA GACGACGC TAA GCCTCGCC GATCCTCGCGGAACC TERM 414 915930 - 915919 - g 75 -3.6 -4.7497 | CTCATGGACGAAAAA GAGG AGTA CCCC AAGTATTGGTGCGGA Tpen_0964 914482 - 916284 + | hypothetical protein Tpen_0965 916356 - 916730 + | hypothetical protein TERM 415 918778 - 918764 - g 78 -4.2 -5.02074 | opp_overlap 918766 918777 918777, overlap 918766 TCATGGGTTAAAAAA TACTGC TGA GCAGTT TTTGGGAAAAAATAT TERM 416 918776 - 918766 - g 71 -6.8 -4.13963 | opp_overlap 918766, overlap 918764 ATGGGTTAAAAAATA CTGC TGA GCAG TTTTTGGGAAAAAAT TERM 417 918766 - 918776 + G 79 -6.8 -4.56775 | opp_overlap 918766 918764 ATGGGTTAAAAAATA CTGC TGA GCAG TTTTTGGGAAAAAAT Tpen_0966 916944 - 919310 + | hypothetical protein Tpen_0967 919463 - 919657 + | hypothetical protein Tpen_0968 919663 - 919881 + | hypothetical protein TERM 418 920136 - 920113 - g 70 -2.4 -4.85599 | gap 1, overlap 920123 TCGAGGGCAGAAAAA CGG-TATCCAA CGT CTGGATCTCCG ACGTAACCGACAAGG Tpen_0969 919890 - 920252 + | hypothetical protein Tpen_0970 920538 - 920275 - | hypothetical protein Tpen_0971 921184 - 920564 - | hypothetical protein Tpen_0972 921277 - 921792 + | PaREP8 domain-containing protein Tpen_0973 922126 - 922572 + | iron dependent repressor Tpen_0974 922685 - 923005 + | FeoA family protein Tpen_0975 922959 - 923204 + | FeoA family protein Tpen_0976 923204 - 925234 + | ferrous iron transport protein B Tpen_0977 925246 - 925749 + | hypothetical protein Tpen_0978 926148 - 925831 - | PilT domain-containing protein Tpen_0979 926526 - 926254 - | hypothetical protein Tpen_0980 927469 - 926840 - | hypothetical protein Tpen_0981 927709 - 928356 + | hypothetical protein Tpen_0982 928490 - 931495 + | hypothetical protein Tpen_0983 931492 - 934551 + | hypothetical protein Tpen_0984 934545 - 934943 + | hypothetical protein Tpen_0985 934943 - 937384 + | helicase domain-containing protein TERM 419 938007 - 938021 + G 74 -6.4 -4.42721 | AGGTCGTGGTTGTAG GGAGGA TTA TTCTCC TTTCTTCTCTAATTA Tpen_0986 937469 - 938407 + | hypothetical protein Tpen_0987 938824 - 939723 + | partition protein, ParA-like Tpen_0988 939720 - 940163 + | hypothetical protein Tpen_0989 941264 - 940254 - | hypothetical protein Tpen_0990 941688 - 941344 - | hypothetical protein Tpen_0991 942048 - 941713 - | DNA polymerase beta subunit Tpen_0992 942448 - 942032 - | HEPN domain-containing protein Tpen_0993 943032 - 942565 - | hypothetical protein Tpen_0994 943391 - 943606 + | hypothetical protein TERM 420 943872 - 943890 + G 74 -13.8 -2.62396 | ACGCCTTCGCATCAG GCGCCGGC GGC GTCGGCGC TGCTGTCGGGCAGTG Tpen_0995 943691 - 944056 + | hypothetical protein Tpen_0996 944062 - 944928 + | cobyrinic acid a,c-diamide synthase Tpen_0997 944932 - 945810 + | cobyrinic acid a,c-diamide synthase TERM 421 946012 - 945976 - f 75 -11.7 -3.06679 | opp_overlap 945965, overlap 945965 AATACGGTGATGCAA CGTGTCCTTCCTGAAGA AGC TCTTCAAGAAGGAGAAG AAGGAGGAGAAGAAA TERM 422 946068 - 946078 + F 82 -2.4 -5.36689 | opp_overlap 946068 AGGAGAAAAAGTGAA CCAG TAG CAGG TTTTCTTTTTGCTTT Tpen_0998 946163 - 946618 + | DNA polymerase beta subunit Tpen_0999 946611 - 947042 + | hypothetical protein Tpen_1000 947089 - 948117 + | hypothetical protein Tpen_1001 948851 - 948090 - | HhH-GPD family protein TERM 423 948219 - 948240 + g 75 -10.1 -3.64703 | TCCGAGGTCTATGAG CGCCAGGGA GATC TCCCTGGGG TTTCCGTGCCGCAGG Tpen_1002 948869 - 949396 + | hypothetical protein Tpen_1003 950307 - 949393 - | ATPases involved in chromosome partitioning-like TERM 424 949430 - 949450 + g 78 -6.1 -4.63592 | opp_overlap 949428, overlap 949428 AGTTGCTTAAGGACC GGGGAGAGC TCG GCTTTTTCC TTCTTTTTCTTCAGC TERM 425 950632 - 950661 + H 71 -2.1 -5.00616 | gap 1, opp_overlap 950627 950639, overlap 950635 950638 950639 TCTTTAACAATTCTT CAAGA-AAGCCGCT CTC GGCGGCATCTCTTA TTTTTTCGAGGAGCG TERM 426 950635 - 950658 + H 70 -3.8 -4.61482 | gap 1, opp_overlap 950627 950639, overlap 950632 950638 950639 TTAACAATTCTTCAA GA-AAGCCGCT CTC GGCGGCATCTC TTATTTTTTCGAGGA TERM 427 950653 - 950639 - H 78 -8.5 -4.1673 | opp_overlap 950639 950638 950635 950632 CAATTCTTCAAGAAA GCCGC TCTCG GCGGC ATCTCTTATTTTTTC Tpen_1004 950774 - 951556 + | stationary-phase survival protein SurE Tpen_1005 951561 - 952109 + | putative NTPase Tpen_1006 953239 - 952106 - | iron-containing alcohol dehydrogenase Tpen_1007 953992 - 953279 - | 5-formyltetrahydrofolate cyclo-ligase Tpen_1008 954842 - 953997 - | DNA polymerase beta subunit TERM 428 954680 - 954700 + g 73 -11.1 -3.35798 | overlap 954684 TCGCCACTCTCTCCT CGGGCGGGA CCT TCCCGTTCG TTATCACTGCCACGT TERM 429 955103 - 955085 - g 70 -12.4 -2.84687 | opp_overlap 955065 955067 CGAAGGACCACTACA GGGACGTC TTC GACGCCCC TGGCGACGTCCTCTC Tpen_1009 954943 - 955362 + | histidine triad (HIT) protein Tpen_1010 955409 - 955972 + | ATP-cone domain-containing protein Tpen_1011 956893 - 955988 - | radical SAM domain-containing protein Tpen_1012 956961 - 957149 + | hypothetical protein Tpen_1013 957204 - 958217 + | oxidoreductase domain-containing protein Tpen_1014 961096 - 958256 - | DEAD/DEAH box helicase domain-containing protein TERM 430 958766 - 958747 - G 72 -9.2 -3.65812 | opp_overlap 958759 GCTTCTCGAATATAA GCTGGGCC AGCG GGCTCAGC TCGGGGAGCCTCTTG Tpen_1015 961236 - 962018 + | hypothetical protein Tpen_1016 962353 - 962015 - | 30S ribosomal protein S25e radA 963490 - 962414 - | DNA repair and recombination protein RadA TERM 431 963366 - 963402 + g 88 -16.6 -2.87647 | gap 1 TCTCCCTCGGGTACC TCCTCGGGCGGGGCCTC CGCC GCGGCCTCGCC-GAGGA TATCCTCTACTAGCT TERM 432 963574 - 963591 + G 70 -4.1 -4.59773 | ACTCCGAGCGGAAGG GCTATAC GCAC GAATAGC TTTTTAACCCTAGAG Tpen_1018 963502 - 964170 + | hypothetical protein Tpen_1019 964237 - 965271 + | hypothetical protein Tpen_1020 965708 - 965268 - | hypothetical protein Tpen_1021 966163 - 965828 - | hypothetical protein Tpen_1022 966673 - 966203 - | hypothetical protein Tpen_1023 967624 - 966677 - | Rad51-like Tpen_1024 968177 - 967608 - | hypothetical protein Tpen_1025 968575 - 968174 - | hypothetical protein Tpen_1026 968657 - 969421 + | dTMP kinase Tpen_1027 969505 - 970059 + | phospholipase D/transphosphatidylase Tpen_1028 970064 - 970342 + | hypothetical protein Tpen_1029 970336 - 971733 + | AIR synthase-like protein Tpen_1030 971925 - 972647 + | threonyl/alanyl tRNA synthetase, SAD TERM 433 973294 - 973315 + G 77 -12.3 -3.57263 | opp_overlap 973275 GGGTCTACAGGGAGA GTTGCGCCG ACTG CGGCGTAAC TTTGACCGTAGCCGT Tpen_1031 972672 - 973340 + | methyltransferase type 11 TERM 434 973366 - 973382 + F 72 -6.6 -4.1822 | opp_overlap 973366 973365 GGACGCGCCTCAAAG GGTTGA CCTCC TCAACC TTTATTAGCGTGGAG Tpen_1032 973412 - 974626 + | hypothetical protein Tpen_1033 974623 - 975501 + | hypothetical protein TERM 435 975592 - 975560 - g 74 -11.3 -3.49475 | CCGACGTCTATAGAA GCGTTTCTAGCAGGC TCC GCCTACTGGAAAAGC TGGAGCTAGTGATAC Tpen_1034 975541 - 976056 + | hypothetical protein Tpen_1035 976062 - 977039 + | hypothetical protein Tpen_1036 977929 - 977036 - | hypothetical protein Tpen_1037 978316 - 978059 - | hypothetical protein Tpen_1038 978404 - 979756 + | L-lactate permease-like Tpen_1039 979817 - 980455 + | hypothetical protein Tpen_1040 980486 - 981334 + | protoheme IX farnesyltransferase Tpen_1041 981795 - 981331 - | NUDIX hydrolase ubiA 982743 - 981832 - | prenyltransferase TERM 436 983575 - 983551 - g 87 -15.7 -2.92463 | GCTACTATGGATAGA GGAGACCCTCG AGC CGAGGGGCTCC GGGGTAAACATGCTC Tpen_1043 982898 - 984220 + | major facilitator transporter Tpen_1044 985023 - 984217 - | NAD+ synthetase Tpen_1045 985200 - 985496 + | hypothetical protein Tpen_1046 985547 - 986827 + | phosphonopyruvate decarboxylase-related protein Tpen_1047 987623 - 986808 - | 4-vinyl reductase, 4VR TERM 437 987590 - 987608 + g 72 -6.7 -4.40605 | overlap 987591 987593 CCACGGCATAAACGG TCCTACC CACCC GGTAGGG TTTGTATTTCTCCAT Tpen_1048 988194 - 987754 - | MarR family transcriptional regulator Tpen_1049 989057 - 988482 - | hypothetical protein TERM 438 989022 - 989038 + g 70 -3.6 -4.61527 | overlap 989023 TGCGAATGCTAGGGG GCCTGC CAGTA GCAGGG TTTTTACGAGGTTTT Tpen_1050 989133 - 989819 + | hypothetical protein TERM 439 990631 - 990670 + G 74 -11.4 -3.48924 | gap 1, opp_overlap 990624 990625 GAGGACAAGGTGGAG CGAGCCTCGCGCGCCCTCT CGG AGATGG-GCGCAAGGGTCG TTGTCTCGGAGATAA Tpen_1051 989824 - 990714 + | GHMP kinase Tpen_1052 990806 - 991078 + | acylphosphatase TERM 440 991928 - 991914 - g 71 -7.1 -4.11484 | TTCAACCGGGCAAAA CGGCT TGCGT AGCCG TGAAGGGCGGCCGCC Tpen_1053 991094 - 992287 + | MoeA domain-containing protein Tpen_1054 992287 - 994242 + | molybdenum cofactor synthesis domain-containing protein TERM 441 994617 - 994654 + G 76 -13.3 -2.79183 | opp_overlap 994577 GACCTCTTCACCGGC CCGCACGACTGGACGGG CGAG CTCGTCCAGGCGGGCGC TCTCGTAGACATCAC Tpen_1055 994302 - 995558 + | extracellular solute-binding protein Tpen_1056 995603 - 996544 + | binding-protein-dependent transport systems inner membrane component Tpen_1057 996548 - 997462 + | binding-protein-dependent transport systems inner membrane component Tpen_1058 997564 - 998667 + | phosphate ABC transporter, periplasmic phosphate-binding protein TERM 442 999339 - 999368 + G 71 -10.1 -3.63569 | gap 1, opp_overlap 999361, overlap 999361 ACGAGGGTTGAGCGT GCC-CGGATAATTC TCG GAATGATCCGCGGC TTCTTCGCGGCTTCG Tpen_1059 998766 - 999662 + | binding-protein-dependent transport systems inner membrane component TERM 443 999846 - 999812 - g 100 -20.1 -3.05384 | gap 1, opp_overlap 999812 TCGTTCTTCACGGAA CCCCCCG-CTCCCCCA GGGG TGGGGGAGACGGGAGG AGTCATCTACGCGCT Tpen_1060 999659 - 1000498 + | phosphate ABC transporter, inner membrane subunit PstA Tpen_1061 1000495 - 1001268 + | ABC transporter related Tpen_1063 1003916 - 1002819 - | amidohydrolase TERM 444 1002968 - 1002944 - G 83 -5.5 -4.87665 | overlap 1002945 TTCCACCGATAAAAA CGTGGCTAGGC CTG GCCTCGCCTCT AACCACCCTTGAAAG Tpen_1064 1004965 - 1003916 - | GMP reductase TERM 445 1004765 - 1004743 - G 71 -11.2 -3.28924 | opp_overlap 1004758 TATTCCTCGGTAGAA CGCCGAGCCC CCC GAGCTCGCCG AGCTTTCTCGCCATC Tpen_1065 1005039 - 1005989 + | phosphate uptake regulator, PhoU Tpen_1066 1006032 - 1006493 + | nuclease Tpen_1067 1006875 - 1006468 - | hypothetical protein Tpen_1068 1007024 - 1007353 + | GCN5-related N-acetyltransferase TERM 446 1007374 - 1007362 - T 80 -5.5 -4.90013 | opp_overlap 1007367 CAAGTGAACCAAAAA GGCTC CCA GAACC CGGTTTTTTCGCTAC TERM 447 1007367 - 1007377 + T 74 -2.4 -5.08824 | opp_overlap 1007362 GAACCAAAAAGGCTC CCAG AAC CCGG TTTTTTCGCTACAGC Tpen_1069 1008418 - 1007396 - | phosphate uptake regulator, PhoU Tpen_1070 1008692 - 1009120 + | NADH-quinone oxidoreductase, B subunit Tpen_1071 1009107 - 1010720 + | NADH-ubiquinone oxidoreductase, chain 49kDa TERM 448 1011104 - 1011116 + G 81 -3.3 -5.32565 | ACGGGCGAGCCAGAG GCGCT CAA GGTGC TTTTTTCCTTCCTTC Tpen_1072 1010717 - 1011418 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Tpen_1073 1011424 - 1012392 + | respiratory-chain NADH dehydrogenase, subunit 1 Tpen_1074 1012389 - 1012829 + | hypothetical protein TERM 449 1013029 - 1013056 + G 72 -9.2 -3.65902 | gap 1, overlap 1013012 1013010 1013033 GTCGCGGCCGCCGGA GCATCGGAGGTCG TGT CGATCTCTG-TGC TTTACCTGGCGTGGA Tpen_1075 1012822 - 1013121 + | NADH-ubiquinone oxidoreductase, chain 4L Tpen_1076 1013127 - 1014788 + | proton-translocating NADH-quinone oxidoreductase, chain L Tpen_1077 1014789 - 1016081 + | NADH dehydrogenase (quinone) Tpen_1078 1016252 - 1016614 + | NADH dehydrogenase subunit A Tpen_1079 1016611 - 1017126 + | NADH-quinone oxidoreductase, B subunit Tpen_1080 1017107 - 1017592 + | NADH dehydrogenase (ubiquinone), 30 kDa subunit Tpen_1081 1017576 - 1018790 + | NADH dehydrogenase subunit D Tpen_1082 1018797 - 1019810 + | respiratory-chain NADH dehydrogenase, subunit 1 Tpen_1083 1019803 - 1020273 + | NADH dehydrogenase subunit I Tpen_1084 1020266 - 1020751 + | NADH-plastoquinone oxidoreductase subunit 6 Tpen_1085 1020748 - 1021053 + | NADH-ubiquinone oxidoreductase, chain 4L Tpen_1086 1021055 - 1022557 + | proton-translocating NADH-quinone oxidoreductase, chain M TERM 450 1023929 - 1023955 + G 72 -6.5 -4.39002 | overlap 1023946 1023947 CCGTAGTCACCGCCG CCCTCACGG CGGCCTATA CCGCGAGGG TTTTCTCGAGGGTTT Tpen_1087 1022560 - 1024635 + | proton-translocating NADH-quinone oxidoreductase, chain L TERM 451 1025953 - 1025970 + G 71 -12.7 -2.55712 | overlap 1025952 1025951 TCGTGGTCACCGCGG CCGCGAG CCTC CTCGCGG GTCTTGTCCCTCTAG Tpen_1088 1024632 - 1026002 + | NADH dehydrogenase (quinone) TERM 452 1026109 - 1026084 - f 70 -3.9 -4.62872 | overlap 1026085 AGTAAGCGTTAAAAA GGCGTAGAGGA GCTT CCCTCTATGCA GGGAGAAGACTTCGA TERM 453 1026840 - 1026824 - g 75 -12.3 -3.26471 | CGACGGCGACAGGAA CGTCCTC TTC GAGGACG GCGAGCTGACCGAGG Tpen_1089 1026105 - 1027382 + | glutamate--ammonia ligase Tpen_1090 1028168 - 1027425 - | hypothetical protein Tpen_1091 1028236 - 1028508 + | phosphotransferase system, phosphocarrier protein HPr Tpen_1092 1030212 - 1028512 - | phosphoenolpyruvate-protein phosphotransferase Tpen_1093 1030326 - 1031483 + | N-acetylglucosamine-6-phosphate deacetylase Tpen_1094 1031494 - 1033323 + | glutamine amidotransferase, class-II Tpen_1095 1033331 - 1034578 + | hypothetical protein Tpen_1096 1035664 - 1034552 - | oxidoreductase domain-containing protein TERM 454 1035277 - 1035247 - G 88 -11.3 -4.11371 | gap 1 CAAGATCCCTCAAAA CCTGTATCCCCGGT GTAA ACCGGG-ATACAAG GCAAACAGCGACACT Tpen_1097 1036177 - 1035674 - | PTS system sorbose subfamily IIB component Tpen_1098 1036608 - 1036219 - | PTS system fructose subfamily IIA component Tpen_1099 1037540 - 1036656 - | hypothetical protein Tpen_1100 1037629 - 1039233 + | PTS system mannose/fructose/sorbose family IID component Tpen_1101 1039979 - 1039293 - | HAD family hydrolase Tpen_1102 1040774 - 1040022 - | phosphoribosyltransferase Tpen_1103 1040892 - 1041647 + | hypothetical protein Tpen_1104 1041651 - 1042475 + | cobalt transport protein Tpen_1105 1042466 - 1044091 + | ABC transporter related Tpen_1106 1044627 - 1044088 - | glutamine amidotransferase class-I Tpen_1107 1045313 - 1044624 - | putative ATP binding protein Tpen_1108 1046362 - 1045334 - | hypothetical protein Tpen_1109 1046553 - 1047833 + | major facilitator transporter TERM 455 1048385 - 1048425 + G 83 -15.5 -2.78596 | AGGTTCCCGGTGGAG TTCGCGAAGTTCGCCGC CTACGTT GCGGCGAGCTTCGGGGA TCTCGTAGACGCGTG Tpen_1110 1047833 - 1049386 + | glycoside hydrolase family protein Tpen_1111 1050287 - 1049376 - | hypothetical protein Tpen_1112 1051397 - 1050381 - | galactose-1-phosphate uridylyltransferase Tpen_1113 1051746 - 1051444 - | hypothetical protein Tpen_1114 1051814 - 1052962 + | GHMP kinase Tpen_1116 1053744 - 1054127 + | hypothetical protein Tpen_1117 1056164 - 1054137 - | TPR repeat-containing protein Tpen_1118 1057315 - 1056272 - | metallophosphoesterase TERM 456 1057852 - 1057831 - g 72 -6.5 -4.26344 | gap 1, opp_overlap 1057831 ACAGGGCGAGCAAAA GCG-TAGCCC TGA GGGCGAACGC TGTTAACTACATGGG Tpen_1119 1057422 - 1058249 + | cation diffusion facilitator family transporter TERM 457 1058938 - 1058902 - g 82 -13.7 -3.28712 | TCTCGGGCGCCATAA GCCTGCTCCAAGAGGCG AAG CTCCTCCTAGAGGAGGC TGAGGCCAAGCTGGA Tpen_1120 1058352 - 1059503 + | hypothetical protein TERM 458 1061284 - 1061272 - g 73 -3.3 -4.84529 | CGAGAAACTGAAAAA GGCCC TCA AAGCC ATGGAGCTCGTCGTG Tpen_1121 1059776 - 1062214 + | molybdopterin oxidoreductase Tpen_1122 1062211 - 1062774 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Tpen_1123 1062771 - 1063649 + | polysulphide reductase, NrfD Tpen_1124 1064006 - 1063662 - | putative succinate dehydrogenase cytochrome b subunit Tpen_1125 1064376 - 1063993 - | succinate dehydrogenase cytochrome b-556 subunit Tpen_1126 1065036 - 1064377 - | succinate dehydrogenase and fumarate reductase iron-sulfur protein Tpen_1127 1066203 - 1065049 - | FAD dependent oxidoreductase TERM 459 1065983 - 1065951 - G 81 -9.1 -4.26076 | opp_overlap 1065953, overlap 1065976 CCACGGCCACGAAAA TCCCGCCGTTCTTCT CGA AGAGGAACGGCGCTA TCCTCCGGAGCACCA TERM 460 1065953 - 1065981 + g 76 -13.9 -2.78384 | opp_overlap 1065951 1065976 ACGGCCACGAAAATC CCGCCGTTCTTCT CGA AGAGGAACGGCGC TATCCTCCGGAGCAC Tpen_1128 1067839 - 1066268 - | glycerol kinase Tpen_1129 1068100 - 1068513 + | thioredoxin Tpen_1130 1070100 - 1068835 - | ATPase TERM 461 1070253 - 1070275 + H 74 -8.4 -3.88583 | CCCGGGCTCAGCGTG GCGGGAGG GCTCGCG CCTTCCGC TTTCTACCAGGTTTG Tpen_1131 1070399 - 1070788 + | HEPN domain-containing protein Tpen_1132 1070764 - 1071108 + | DNA polymerase beta subunit Tpen_1133 1071167 - 1071880 + | hydrolase Tpen_1134 1071902 - 1072768 + | protein of unknown function DUF340, membrane TERM 462 1073869 - 1073841 - g 72 -5.7 -4.42386 | CTCGCAGGGAGAAAA CCGCGCGGGTCGG CAC CTGCGTCGCGCGG GTAAACTGAAAAATT Tpen_1135 1072779 - 1073873 + | major facilitator transporter Tpen_1136 1073965 - 1074969 + | ABC transporter related TERM 463 1075331 - 1075368 + G 71 -6.8 -4.12188 | AGCCGTAGCGTTCCT GCCTGTCCTCGCGCTC GAAGAG GGGCCCGCGGACGCGC TTTTACACCTCCTCG Tpen_1137 1074966 - 1075748 + | ABC-2 type transporter Tpen_1138 1075750 - 1076493 + | putative ABC-2 type transport system permease protein Tpen_1139 1077967 - 1076576 - | ferredoxin-dependent glutamate synthase Tpen_1140 1079073 - 1077979 - | asparagine synthetase A TERM 464 1079212 - 1079179 - R 83 -5.2 -5.055 | GGAAGCTGTAAAAAA TTCCGGAGAAGAGG CCCAAC CCCCTGCCGCGGAA CACGCGCATAGAGTG Tpen_1141 1079787 - 1079236 - | flavin reductase domain-containing protein TERM 465 1079990 - 1079975 - R 72 -8.2 -3.74347 | opp_overlap 1079975, overlap 1079968 GGGAGAAAGCTGAAA CCGAGG ATCT CCCCGG TTTACAAACCCAGGG Tpen_1142 1080257 - 1080027 - | hypothetical protein TERM 466 1080307 - 1080329 + H 73 -9 -3.5936 | overlap 1080309 1080310 ACGCTGACCCCTGAT GCCGCGCCCT CGT AGGGCGCCTC TTTCCACCATTTAAG TERM 467 1080309 - 1080327 + H 72 -10.2 -3.37283 | overlap 1080307 1080310 GCTGACCCCTGATGC CGCGCCCT CGT AGGGCGCC TCTTTCCACCATTTA TERM 468 1080310 - 1080326 + H 84 -13.7 -2.61888 | overlap 1080309 1080307 CTGACCCCTGATGCC GCGCCCT CGT AGGGCGC CTCTTTCCACCATTT Tpen_1143 1080358 - 1081791 + | hypothetical protein Tpen_1144 1082648 - 1081851 - | putative circadian clock protein, KaiC TERM 469 1082709 - 1082687 - H 74 -6.2 -4.57837 | AGAGCCCCCTAAAAA GTTTCCCCCA GTA CGGAGGACAC GGCGACCCGCTGGGC Tpen_1145 1084390 - 1085751 + | hypothetical protein Tpen_1146 1086462 - 1085761 - | HAD family hydrolase TERM 470 1087042 - 1087088 + G 72 -9.3 -3.72576 | gap 1, opp_overlap 1087062 CTGGGGATTAGGGGC GTCGTCGCCCCCGCGACGAAGC CGGG GCTG-GTGGCGCGGGCGAGGGC TTTCCTGCCGGAGGA Tpen_1147 1086583 - 1087272 + | orotidine 5'-phosphate decarboxylase Tpen_1148 1087269 - 1087790 + | orotate phosphoribosyltransferase Tpen_1149 1088890 - 1087814 - | ABC transporter related Tpen_1150 1089735 - 1088896 - | binding-protein-dependent transport systems inner membrane component Tpen_1151 1090681 - 1089737 - | binding-protein-dependent transport systems inner membrane component Tpen_1152 1091893 - 1090712 - | extracellular solute-binding protein TERM 471 1091348 - 1091333 - G 70 -11.8 -2.70932 | GGGCTTGTCGAAGTA GGCGGC GTCG GCCGCC GAGTCGAAGCGCGGT TERM 472 1092037 - 1092053 + H 72 -8.1 -3.99805 | CGCTCATCAGGAGTT TACTACT AAA AGTAGTA TTTAAATTTTTCCCA Tpen_1153 1092105 - 1093166 + | glycosidase, PH1107-related Tpen_1154 1094210 - 1093176 - | transcriptional regulator, TrmB Tpen_1155 1096378 - 1094264 - | Kojibiose phosphorylase TERM 473 1094339 - 1094380 + g 78 -9.9 -4.07568 | AAACCAAACGTTTAG CTCGACGCCGAGCCCCTCC GGGA GGCGTGGCTCCGCGACCAG TTTTCCGCCGCGGGG Tpen_1156 1097055 - 1096375 - | HAD family hydrolase pyrB 1097173 - 1098120 + | aspartate carbamoyltransferase catalytic subunit Tpen_1158 1098127 - 1098606 + | aspartate carbamoyltransferase regulatory subunit TERM 474 1099019 - 1099057 + G 78 -8.9 -4.11216 | gap 1, overlap 1099006 TTGCTACGGTGCCCG GAGCTCTTCGTGGGCGGG AAGC TCTACCCA-GAGGAGCTC TTTTCGCGGTCAGCC Tpen_1159 1098599 - 1099894 + | dihydroorotase, multifunctional complex type Tpen_1160 1099900 - 1100700 + | oxidoreductase FAD/NAD(P)-binding subunit Tpen_1161 1100711 - 1101610 + | dihydroorotate dehydrogenase family protein Tpen_1162 1102375 - 1101722 - | metal dependent phosphohydrolase Tpen_1163 1102457 - 1104124 + | CTP synthetase Tpen_1164 1104144 - 1106288 + | hypothetical protein Tpen_1165 1106370 - 1107461 + | ABC transporter related Tpen_1166 1107836 - 1107474 - | hypothetical protein TERM 475 1108469 - 1108457 - g 71 -7.7 -4.0162 | TGTCGAGAGGATAAA GAAGC GGG GCTTC AAGGTGATAACGTGG Tpen_1167 1107894 - 1108595 + | glycerophosphoryl diester phosphodiesterase Tpen_1168 1108637 - 1110541 + | transglutaminase domain-containing protein TERM 476 1111538 - 1111520 - g 75 -5.9 -4.67234 | overlap 1111521 AGGCAAGCTGAAAAA GCTCGGG TGGAG CCCGAGG TACACGAGCAGGGAC Tpen_1169 1110648 - 1111595 + | NAD-dependent epimerase/dehydratase Tpen_1170 1112021 - 1111599 - | hypothetical protein Tpen_1171 1112791 - 1112018 - | hypothetical protein TERM 477 1112270 - 1112248 - G 77 -13.5 -2.96695 | overlap 1112245 CTTGCCACGAAAGGA GGGCTACCT GCAGG AGGTAGCCC GGCTTCGCATGGGCG TERM 478 1112951 - 1112973 + G 80 -9.8 -4.20696 | GCTGAGAGGGGTTAG CTTCGCCGTC GAG GAGGGCGAGG TTTTCGGGTTGATAG Tpen_1172 1112883 - 1113614 + | ABC transporter related TERM 479 1113906 - 1113893 - g 75 -9.5 -3.89614 | overlap 1113894 GGCAACGTTGAGAAA GCCGC GGAA GCGGC TTCGGCGAAGGGGGC Tpen_1173 1113614 - 1114927 + | ABC-2 type transporter TERM 480 1115072 - 1115058 - g 81 -3.5 -5.28778 | ATGAGCCAGAAAAAA GGCCT GCAGA AGACC ACAGCGATACTGCTC Tpen_1174 1115043 - 1116551 + | extracellular solute-binding protein Tpen_1175 1116583 - 1117497 + | binding-protein-dependent transport systems inner membrane component Tpen_1176 1117508 - 1118344 + | binding-protein-dependent transport systems inner membrane component TERM 481 1118867 - 1118842 - g 76 -12.6 -3.14564 | CGAGCCCCTCAGCAA CCTCGACGCG AAGATA CGCGTCGAAG TGAGGGCTGAGCTGA Tpen_1177 1118351 - 1119421 + | ABC transporter related TERM 482 1119445 - 1119461 + F 73 -9.4 -3.57639 | overlap 1119443 TTAAAGAGGCTCTTT CTCGCG CGTCC CGCGAG TATTTATACCTCTTA Tpen_1178 1119502 - 1120104 + | metal dependent phosphohydrolase Tpen_1179 1120119 - 1121018 + | UbiA prenyltransferase TERM 483 1121041 - 1121066 + G 74 -6.8 -4.36914 | gap 1 TCTGCCCTGGTACGT CCCGCC-CACG CTCTT CGTGCGGCAGG TTTTATCCGCGGCGA TERM 484 1122251 - 1122229 - g 80 -14.8 -2.78596 | GAGCGGTCCACTACA GCCCGCCGCC AAG AGCGGCGAGC CTAACTAGGAGACCC Tpen_1180 1121003 - 1122259 + | radical SAM domain-containing protein Tpen_1181 1123791 - 1122409 - | hypothetical protein Tpen_1182 1124360 - 1123929 - | hypothetical protein Tpen_1183 1124511 - 1124338 - | hypothetical protein Tpen_1184 1125894 - 1124920 - | hypothetical protein Tpen_1185 1126541 - 1125900 - | multiple antibiotic resistance (MarC)-related proteins TERM 485 1125991 - 1125974 - G 76 -7 -4.43844 | opp_overlap 1125974 GGAGTAGCGAGAAAA TCCTCG AGAGAA CGAGGA TCGTGTTCTTACCAG TERM 486 1126501 - 1126517 + g 71 -7.2 -4.17556 | opp_overlap 1126494, overlap 1126500 ACCACGAAGCCCACC GCGCGT GTTAG GCGCGC TTTCTTAAAAATATC Tpen_1186 1128279 - 1126531 - | hypothetical protein Tpen_1187 1128780 - 1128331 - | PilT domain-containing protein TERM 487 1128680 - 1128665 - G 83 -7.6 -4.59773 | opp_overlap 1128665 TTCCATGCCGAAAAA GAGAGA GTGC TCTCTC CGTTCAGCGCCTTGT Tpen_1188 1129043 - 1128777 - | hypothetical protein TERM 488 1129158 - 1129146 - H 72 -5.5 -4.51196 | overlap 1129147 TCTAAAGGTATAAAA CGCTC ACA GAGCA AAGCCTAACAAGCCT TERM 489 1129188 - 1129200 + H 76 -7.7 -4.17789 | TCCCGGGCAATCCCA GCCTT TTG AAGGC TTTAATTTATGCTTG TERM 490 1129558 - 1129518 - g 87 -9.7 -4.59773 | gap 1, opp_overlap 1129517, overlap 1129552 CTGGACCGTCAAAAA CCTCGACC-AGCTCCGCG TATACC CGGGAAGCAAGGTCGAGG CTCTGGTAGAGCTCG Tpen_1189 1129267 - 1129950 + | hypothetical protein Tpen_1190 1129961 - 1130572 + | hypothetical protein Tpen_1191 1131784 - 1130627 - | hypothetical protein Tpen_1192 1132268 - 1131849 - | hypothetical protein Tpen_1193 1133083 - 1132325 - | threonyl/alanyl tRNA synthetase, SAD Tpen_1194 1133828 - 1133058 - | methyltransferase type 11 Tpen_1195 1133954 - 1134766 + | LmbE family protein Tpen_1196 1134804 - 1136171 + | amino acid permease-associated region Tpen_1197 1136895 - 1136152 - | MscS mechanosensitive ion channel Tpen_1198 1137543 - 1136899 - | TrkA domain-containing protein Tpen_1199 1137627 - 1138898 + | geranylgeranyl reductase TERM 491 1138892 - 1138882 - T 81 -6.8 -4.66318 | overlap 1138890 ACTACTCGAAGAAAA GGCT AAA AGCC GGGTAGCGCGACAGC Tpen_1200 1139607 - 1138918 - | hypothetical protein Tpen_1201 1140387 - 1139662 - | hypothetical protein Tpen_1202 1140481 - 1141692 + | saccharopine dehydrogenase Tpen_1203 1143098 - 1141701 - | citrate transporter Tpen_1204 1143169 - 1143576 + | hypothetical protein Tpen_1205 1143707 - 1144429 + | ABC transporter related Tpen_1206 1144422 - 1145834 + | FeS assembly protein SufB TERM 492 1146811 - 1146797 - g 71 -11.4 -3.18264 | GGCTTCACGGAGCAA GAGGCG CTC CGCCTC GCCCTGAAGGCAGAG Tpen_1207 1145831 - 1146925 + | SufBD protein TERM 493 1147059 - 1147047 - f 95 -10.5 -4.46212 | TGTCCCAGCAGAAAA CCGGC CCA GCCGG CAAGACCCTGGCTGT TERM 494 1147945 - 1147970 + G 82 -13.3 -3.20841 | opp_overlap 1147939, overlap 1147942 1147943 TGTAAGCCAGCAGCC CTACGCGCAGG GCTT CCTGCCCGTAG TCTTCATGTACCTCT Tpen_1208 1147136 - 1148098 + | sugar binding protein of ABC transporter Tpen_1209 1148133 - 1149119 + | inner-membrane translocator TERM 495 1149402 - 1149376 - g 79 -13.8 -3.052 | opp_overlap 1149376 AGGGGCATAGAGATA GTCTACCAGCAC CTC GCGCTGATAGAC TTGCTGAGCATAGAC Tpen_1210 1149124 - 1149903 + | ABC transporter related Tpen_1211 1151506 - 1150163 - | monomethylamine methyltransferase Tpen_1212 1152204 - 1151530 - | methionine synthase Tpen_1213 1152491 - 1152210 - | hypothetical protein Tpen_1214 1152996 - 1152562 - | hypothetical protein TERM 496 1152971 - 1152988 + g 70 -2.5 -4.86773 | overlap 1152973 AGTAGTGTTGCTATT ACGGGGC TTAC GCCCCTC TTTTTCATCGTTTTC TERM 497 1152973 - 1152986 + g 78 -9.5 -4.02953 | overlap 1152971 TAGTGTTGCTATTAC GGGGC TTAC GCCCC TCTTTTTCATCGTTT Tpen_1215 1153882 - 1153055 - | UDP-glucose/GDP-mannose dehydrogenase Tpen_1216 1154189 - 1153923 - | hypothetical protein Tpen_1217 1154973 - 1154218 - | hypothetical protein Tpen_1218 1155105 - 1156223 + | peptidase M48, Ste24p TERM 498 1156299 - 1156283 - T 76 -9.3 -3.74347 | opp_overlap 1156284, overlap 1156277 1156276 1156284 CGGAGAAAGCTGAAA CCGCGGG CCT CCCGCGT TTACAAACCAGGGGG TERM 499 1156298 - 1156284 - T 78 -12.8 -2.84126 | opp_overlap 1156284, overlap 1156283 1156277 1156276 GGAGAAAGCTGAAAC CGCGGG CCT CCCGCG TTTACAAACCAGGGG TERM 500 1156284 - 1156298 + T 86 -12.8 -3.53012 | opp_overlap 1156284 1156283 1156277 1156276 GGAGAAAGCTGAAAC CGCGGG CCT CCCGCG TTTACAAACCAGGGG Tpen_1219 1156541 - 1156335 - | hypothetical protein Tpen_1220 1156618 - 1157994 + | hypothetical protein Tpen_1221 1158123 - 1159310 + | zinc finger, RanBP2-type TERM 501 1160124 - 1160106 - g 78 -8.8 -4.25104 | overlap 1160115 GGGGCCCGAGGAAAA CGTGAGGA AGC TCCTCTCG GAGCTGGAGGGCGTG Tpen_1222 1159375 - 1160334 + | ABC transporter related Tpen_1223 1160348 - 1161130 + | ABC-2 type transporter Tpen_1224 1161121 - 1161903 + | ABC-2 type transporter TERM 502 1163914 - 1163900 - g 76 -12.8 -3.10343 | AGAGCTACTACGTAA GGGCGG AGG CCGCCC TCTCAATAGCGAAGA Tpen_1225 1161958 - 1164429 + | peptidase M1, membrane alanine aminopeptidase Tpen_1226 1164490 - 1164771 + | hypothetical protein rbcL 1164846 - 1166177 + | ribulose bisophosphate carboxylase Tpen_1228 1167721 - 1166174 - | radical SAM domain-containing protein Tpen_1229 1168014 - 1167727 - | hypothetical protein Tpen_1230 1168141 - 1168674 + | flavin reductase domain-containing protein Tpen_1231 1169714 - 1168671 - | 3-dehydroquinate synthase TERM 503 1169764 - 1169751 - H 73 -3.8 -4.8667 | CACACCTGATAAAAA GCCT TTTCGC AGGC TCGGGAAGCATGTTC Tpen_1232 1169787 - 1170647 + | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase Tpen_1233 1171332 - 1170619 - | hydrolase Tpen_1234 1171865 - 1171365 - | hypothetical protein TERM 504 1171680 - 1171713 + g 84 -15.9 -2.52896 | overlap 1171700 GTAGACGGCCGCGGC GCCCTCTGGGAGGCC GCGC GGCGACCCGGAGGGC TCGATTACCACGTAG Tpen_1235 1171924 - 1173228 + | radical SAM domain-containing protein Tpen_1236 1173609 - 1173208 - | CopG family transcriptional regulator Tpen_1237 1174242 - 1173760 - | YbaK/prolyl-tRNA synthetase associated region Tpen_1238 1174988 - 1174248 - | hypothetical protein TERM 505 1175085 - 1175105 + H 78 -11.1 -3.49107 | overlap 1175082 1175086 CCTGGGGACCTCTAT GGCACGCGA TAC TCGCGTGCA TCTTCATTTTTACCT TERM 506 1175086 - 1175104 + H 90 -14.6 -2.6838 | overlap 1175085 1175082 CTGGGGACCTCTATG GCACGCGA TAC TCGCGTGC ATCTTCATTTTTACC Tpen_1239 1175321 - 1176160 + | hypothetical protein Tpen_1240 1177029 - 1176157 - | uridine phosphorylase TERM 507 1176898 - 1176931 + g 74 -8.1 -4.10164 | gap 1, opp_overlap 1176900 CGGGTCGCCCGGAAG GAGCACGGTCGGGG CGACGTC CCCCGGCC-TGCAC TTTATGTGGTACTGG Tpen_1241 1177078 - 1177521 + | RpiB/LacA/LacB family sugar-phosphate isomerase Tpen_1242 1178121 - 1177513 - | hypothetical protein Tpen_1243 1178632 - 1178135 - | hypothetical protein Tpen_1244 1179291 - 1178593 - | hypothetical protein TERM 508 1178755 - 1178710 - GH 88 -11.8 -3.73224 | gap 1 CGACGTGGGAGGAAA CGTCGCGCGCCTCCCCGGGAC GGCTA GCCCCGTGAAG-CGCTCAACG ATCCGCCCGCCCGGC TERM 509 1181622 - 1181600 - g 70 -12 -2.70932 | opp_overlap 1181592 GGCGTGGGCTAAGTA CGTCGGTGTC GGC GATACCGACG CGACGTTCAAGCTAC Tpen_1245 1179621 - 1181771 + | extracellular solute-binding protein Tpen_1246 1181816 - 1182874 + | binding-protein-dependent transport systems inner membrane component Tpen_1247 1182877 - 1183992 + | binding-protein-dependent transport systems inner membrane component TERM 510 1184405 - 1184380 - g 83 -15.5 -2.83905 | gap 1, overlap 1184371 1184382 CTATAACGGAGCACA GAG-GCGTCCCC AAG GGGGACGCGCTC AGGGAGGCCGTCTCC TERM 511 1184402 - 1184382 - g 74 -12.5 -2.96538 | overlap 1184380 1184371 ATAACGGAGCACAGA GGCGTCCCC AAG GGGGACGCG CTCAGGGAGGCCGTC TERM 512 1184827 - 1184810 - g 72 -4.9 -4.58283 | gap 1, overlap 1184812 GAACCCGCTGAAAAA GA-TCGAG CGC CTCGAGTC GATCCCGGGGACTGT Tpen_1248 1183989 - 1184987 + | oligopeptide/dipeptide ABC transporter, ATPase subunit TERM 513 1185179 - 1185194 + G 72 -4.6 -4.63218 | ATCAGGCTCCTCGAG CCTACC GGTG GGAAGG TTTTCTTCAAGGGGC Tpen_1249 1184993 - 1185955 + | oligopeptide/dipeptide ABC transporter, ATPase subunit TERM 514 1185972 - 1186005 + F 75 -4.5 -4.80455 | GCCCCTTAGTCACTA CACTGTTACTCCCCG GCGT CGCCGGTTAACAGTG TTTTCTCTTTCGATG Tpen_1250 1186233 - 1188059 + | nucleotidyl transferase Tpen_1251 1188068 - 1189300 + | hypothetical protein Tpen_1252 1189761 - 1189318 - | DNA polymerase beta subunit Tpen_1253 1190164 - 1189736 - | hypothetical protein Tpen_1254 1190253 - 1191407 + | radical SAM domain-containing protein Tpen_1255 1192505 - 1191675 - | binding-protein-dependent transport systems inner membrane component Tpen_1256 1193377 - 1192502 - | binding-protein-dependent transport systems inner membrane component Tpen_1257 1194832 - 1193429 - | extracellular solute-binding protein Tpen_1258 1194966 - 1195640 + | formate dehydrogenase family accessory protein FdhD Tpen_1259 1195665 - 1196675 + | hypothetical protein Tpen_1260 1196724 - 1197548 + | hypothetical protein Tpen_1261 1197584 - 1197871 + | Alba, DNA/RNA-binding protein TERM 515 1197881 - 1197905 + F 90 -11.5 -3.89055 | opp_overlap 1197880, overlap 1197884 GCGTAGCTAGAGGAG GTTTGCGGAAT ACA ATTCCGCATAC TTTATAAGGGTGTGT TERM 516 1197884 - 1197902 + F 75 -11.8 -3.01422 | opp_overlap 1197880, overlap 1197881 TAGCTAGAGGAGGTT TGCGGAAT ACA ATTCCGCA TACTTTATAAGGGTG Tpen_1262 1197936 - 1199168 + | AAA family ATPase Tpen_1263 1199259 - 1200020 + | CRISPR-associated protein APE2256 family TERM 517 1200091 - 1200057 - g 77 -12 -3.61398 | CGCCCTCGTGAAGAA CCTCAGGGGAGTCGTG CTC CTCGACCCCTCGGAGG AGGGCGCGAAGGAGT Tpen_1264 1200025 - 1200732 + | hypothetical protein Tpen_1265 1200826 - 1202220 + | phosphoenolpyruvate carboxylase Tpen_1266 1202276 - 1203952 + | hypothetical protein TERM 518 1203993 - 1203961 - f 72 -10.5 -3.04144 | opp_overlap 1203953 1203961 TGGTTAGGTTTAATA GTTCCGGTGCGGAAC TGA GTTCCGGTGCGGAAC CGTGAAGCTGTTCGA Tpen_1267 1203995 - 1205023 + | ATPase Tpen_1268 1205984 - 1205013 - | PP-loop domain-containing protein TERM 519 1207515 - 1207475 - g 82 -14 -3.31792 | gap 1 GGACGACTGGGAGAA GGCCGCCGGGATATCCAGC CCGA GCTGGG-ACCCCGGCAACC CGTACCGCTACAGGG Tpen_1269 1206045 - 1209386 + | glycoside hydrolase family protein TERM 520 1210379 - 1210354 - g 76 -11.9 -3.36803 | gap 1 CAAGGCTAGGGAGAA GGCGCTC-AACG AGA CGCTGGAGCGCC TGAGCGCCGAGGTAG Tpen_1270 1209380 - 1210636 + | hypothetical protein Tpen_1271 1211860 - 1211042 - | beta-lactamase domain-containing protein TERM 521 1211651 - 1211614 - G 76 -13.3 -2.70932 | overlap 1211641 1211644 CGTTGCGCTCAAGCA CGCCCGGCTCCGGCCCA GCGT CGAACAGGAGCCTGGCG CCCCCGGCCTCTACG TERM 522 1212641 - 1212618 - g 71 -10.2 -3.48395 | AGGTCCGCGAGATAA GGCTACCCTC CGAG GCGGGCAGCC TGGTGGAGTGGCGCG Tpen_1272 1211912 - 1213276 + | CRISPR-associated DxTHG family protein Tpen_1273 1213354 - 1214310 + | ABC transporter related Tpen_1274 1214307 - 1215764 + | hypothetical protein Tpen_1275 1215844 - 1216197 + | hypothetical protein Tpen_1276 1216222 - 1216755 + | hypothetical protein Tpen_1278 1218128 - 1217145 - | hypothetical protein Tpen_1277 1216769 - 1217206 + | DNA polymerase beta subunit Tpen_1279 1218264 - 1219022 + | queuine tRNA-ribosyltransferase TERM 523 1219105 - 1219134 + T 95 -9.3 -4.78848 | opp_overlap 1219110, overlap 1219106 CATGGGCTCTTTTCT ACAAATTCCCGAC AGAG GTCGGGAATTCGA TTTTCTGTTTACGAA TERM 524 1219106 - 1219133 + T 86 -12.8 -3.46586 | opp_overlap 1219110, overlap 1219105 ATGGGCTCTTTTCTA CAAATTCCCGAC AGAG GTCGGGAATTCG ATTTTCTGTTTACGA TERM 525 1219129 - 1219110 - T 91 -12.2 -3.85698 | opp_overlap 1219106 1219105 GCTCTTTTCTACAAA TTCCCGAC AGAG GTCGGGAA TTCGATTTTCTGTTT TERM 526 1219213 - 1219196 - T 70 -7 -4.07687 | opp_overlap 1219196 1219209 ATGCCTCCCGTAAAA TCCCGA TCTCTG TCGGGA TTATCTCGTGTTTGC Tpen_1280 1220594 - 1220106 - | hypothetical protein Tpen_1281 1220717 - 1220622 - | hypothetical protein TERM 527 1220776 - 1220796 + r 72 -11.1 -3.07501 | opp_overlap 1220766, overlap 1220767 1220784 CCGAACCCTCTAAGC TCCCCCTGG TTG CCAGGAGGA TCTTCACGGTTCTCT TERM 528 1220871 - 1220852 - R 77 -2.8 -5.15969 | gap 1 CCCCAAGGGAAAAAA CGCTACGCT TTC AGGGT-GCG CGGAGCCGGGTAGAG Tpen_1282 1221183 - 1220854 - | hypothetical protein Tpen_1283 1221527 - 1221180 - | hypothetical protein TERM 529 1221852 - 1221807 - R 80 -13.1 -2.52795 | gap 1, opp_overlap 1221807 AAGCGTGTGAAGGGA GGGGGAGAGGGGGCTTGCCTCG GGG CGGGACTCGCCCCC-CTCCCGC TTCCTCGTGGCCCGC TERM 530 1221807 - 1221852 + r 85 -13.1 -3.21099 | gap 1, opp_overlap 1221807 AAGCGTGTGAAGGGA GGGGGAGAGGGGGCTTGCCTCG GGG CGGGACTCGCCCCC-CTCCCGC TTCCTCGTGGCCCGC TERM 531 1221862 - 1221886 + r 79 -12.7 -3.05384 | TCCCGCTTCCTCGTG GCCCGCCCGCC ACC GGCGGGACGGC TTGCCTCCGGCAGGC TERM 532 1221899 - 1221943 + r 70 -10 -3.14132 | gap 2, opp_overlap 1221922, overlap 1221941 GGCTTGCCTCCGGCA GGCCT-TCGGGA-GTAGCGACG TAA CGCCGCCACCTCCTGGCAGGCC TTCATCGGCGCCCGG TERM 533 1222247 - 1222283 + r 73 -9.4 -3.69564 | gap 1, overlap 1222249 1222250 CCCGAGGAGCGCGTC CCCCCT-AGGGCTCCCC GTTC GGGGAGCCTTCAGGATG TTCTACTTTCTTCCT TERM 534 1222249 - 1222281 + r 76 -10.6 -3.41504 | gap 1, overlap 1222247 1222250 CGAGGAGCGCGTCCC CCCT-AGGGCTCCCC GTTC GGGGAGCCTTCAGGA TGTTCTACTTTCTTC TERM 535 1222250 - 1222280 + r 84 -14.1 -2.63818 | gap 1, overlap 1222249 1222247 GAGGAGCGCGTCCCC CCT-AGGGCTCCCC GTTC GGGGAGCCTTCAGG ATGTTCTACTTTCTT Tpen_1284 1225090 - 1222478 - | ankyrin Tpen_1285 1227171 - 1225156 - | hypothetical protein TERM 536 1226860 - 1226848 - G 76 -3.3 -4.91109 | GTCCGAGTAGAAAAA CACGT AGT ACGAG CCGGGGCTATCTATC TERM 537 1227476 - 1227516 + H 75 -11.7 -3.08032 | overlap 1227473 1227486 1227488 TGAACGCGACGCCGG GCGAGGCGATGTGGGCGCC GAA GGCGCTCTCTTAGTCTTGC TGATTTTGAACCGAG TERM 538 1227486 - 1227506 + H 72 -10.3 -3.40565 | overlap 1227476 1227473 1227488 GCCGGGCGAGGCGAT GTGGGCGCC GAA GGCGCTCTC TTAGTCTTGCTGATT TERM 539 1227488 - 1227504 + H 77 -11.5 -3.26531 | overlap 1227486 1227476 1227473 CGGGCGAGGCGATGT GGGCGCC GAA GGCGCTC TCTTAGTCTTGCTGA TERM 540 1228122 - 1228135 + H 83 -5.2 -5.07523 | opp_overlap 1228102, overlap 1228102 1228101 1228134 TTGTGGGAGCCTTTT CCCG CAAATC CGGG TTTTATTTCTCTGTG TERM 541 1228280 - 1228298 + H 100 -13.2 -3.89614 | opp_overlap 1228273 CCAGTAAAGCTTTTA CCCTTGAC ACT GTCAAGGG TTTATAAGCCTTCCC Tpen_1286 1228516 - 1228902 + | hypothetical protein Tpen_1287 1228909 - 1229622 + | CRISPR-associated Csm3 family protein Tpen_1288 1229619 - 1230542 + | CRISPR-associated Csm3 family protein TERM 542 1230910 - 1230887 - gf 72 -10.2 -3.28712 | GGTCCTGCCTCATAA GGGCGACCGA GGGC CCGGTGGCCC CGCCGAAGAAGGGGG Tpen_1289 1230517 - 1231515 + | hypothetical protein Tpen_1290 1231493 - 1234237 + | metal dependent phosphohydrolase Tpen_1291 1234231 - 1234899 + | hypothetical protein Tpen_1292 1234899 - 1235873 + | hypothetical protein Tpen_1293 1235857 - 1236723 + | hypothetical protein Tpen_1294 1236705 - 1237148 + | hypothetical protein Tpen_1295 1237206 - 1237781 + | hypothetical protein Tpen_1296 1237818 - 1239365 + | hypothetical protein Tpen_1297 1241035 - 1239362 - | glycoside hydrolase family protein TERM 543 1241717 - 1241681 - g 77 -12.1 -3.61922 | AACACTGATGGTAAA CGGCTCCCCCACCCCGC CCG GCGAGGTGAGGGTCTCG GGCAATACTACAATC Tpen_1298 1241214 - 1243007 + | hypothetical protein Tpen_1299 1243716 - 1243279 - | hypothetical protein Tpen_1300 1244095 - 1244478 + | HEPN domain-containing protein Tpen_1301 1244465 - 1244776 + | DNA polymerase beta subunit Tpen_1302 1244826 - 1245053 + | hypothetical protein TERM 544 1246252 - 1246204 - g 75 -12.4 -3.30771 | gap 1, overlap 1246206 TCACAGGCGTCATAA CAGGGGCTGTG-GCCTCCTCGAG GCTC CTCGAGACGGCACACGGCCTCTA CACGAACTACCTGCC TERM 545 1246250 - 1246206 - g 79 -12.8 -3.22102 | gap 1, overlap 1246204 ACAGGCGTCATAACA GGGGCTGTG-GCCTCCTCGAG GCTC CTCGAGACGGCACACGGCCTC TACACGAACTACCTG Tpen_1303 1245159 - 1246346 + | major facilitator transporter Tpen_1304 1246763 - 1246500 - | hypothetical protein TERM 546 1246837 - 1246820 - R 73 -11.3 -2.64416 | overlap 1246794 1246819 CACTCCTAGTAGAAG CGTAGCC ACGT GGCTACG AGCGCCTTCGCCAGC Tpen_1305 1248900 - 1246810 - | hypothetical protein Tpen_1306 1249233 - 1248958 - | hypothetical protein TERM 547 1250225 - 1250196 - R 95 -9.3 -4.78848 | opp_overlap 1250201 1250202, overlap 1250197 1250202 TTCGTAAACAGAAAA TCAAAATCCCGAC CTCT GTCGGGAATTTGT AGGGAGGTTTTTCAC TERM 548 1250224 - 1250197 - R 86 -12.8 -3.46586 | opp_overlap 1250201 1250202, overlap 1250196 1250202 TCGTAAACAGAAAAT CAAAATCCCGAC CTCT GTCGGGAATTTG TAGGGAGGTTTTTCA TERM 549 1250201 - 1250220 + r 72 -7.8 -3.8709 | opp_overlap 1250197 1250196 1250202, overlap 1250202 AAACAGAAAATCAAA ATCCCGAC CTCT GTCGGGAA TTTGTAGGGAGGTTT TERM 550 1250219 - 1250202 - R 100 -11.3 -4.76874 | opp_overlap 1250201 1250202, overlap 1250197 1250196 AACAGAAAATCAAAA TCCCGAC CTCT GTCGGGA ATTTGTAGGGAGGTT TERM 551 1250202 - 1250219 + r 75 -11.3 -2.91772 | opp_overlap 1250202 1250197 1250196, overlap 1250201 AACAGAAAATCAAAA TCCCGAC CTCT GTCGGGA ATTTGTAGGGAGGTT Tpen_1307 1250635 - 1250393 - | paREP6 TERM 552 1250507 - 1250532 + g 82 -14.7 -3.00022 | GACGTACAGCTTCAA GGCGGCCCTCA CCCT TGGGGGCTGCC TCTCTATGAACTCCC TERM 553 1252056 - 1252037 - H 81 -10 -3.95073 | opp_overlap 1252036 1252033 GGGCATACCCACAAA TTCCCGGC AAAA ACCGGGAA CTCGATTTTCTGTTT Tpen_1309 1252980 - 1253558 + | PaREP8 domain-containing protein TERM 554 1254384 - 1254368 - T 76 -8.1 -4.27584 | opp_overlap 1254368 ATTTTGAACTGAAAA GAGATTA ATC TAATCTC TTTACTCTAGGGACT TERM 555 1255083 - 1255101 + T 70 -3.8 -4.72486 | overlap 1255084 CCAGTAAAGCTTTTA TCGTTGAC AGT GTCAAGGG TTTTTAAGCTTTCTC Tpen_1310 1255941 - 1255105 - | hypothetical protein TERM 556 1256878 - 1256904 + H 71 -11 -2.90075 | opp_overlap 1256876, overlap 1256869 GGCTTTCAACTCATT CGTTGTTGATAC ACG GTATCAAGAACG TGTCCTTCAGCGAGC Tpen_1311 1258866 - 1259102 + | hypothetical protein Tpen_1312 1259122 - 1259439 + | hypothetical protein Tpen_1313 1259705 - 1259436 - | ABC-type sulfate/molybdate transport systems ATPase component-like Tpen_1314 1259831 - 1260169 + | quinolinate phosphoribosyl transferase TERM 557 1260666 - 1260679 + T 83 -5.2 -5.07523 | opp_overlap 1260646, overlap 1260646 1260645 TTGTGGGAGCCTTTT CCCG CAAATC CGGG TTTTATTTCTCTGTG Tpen_1315 1261985 - 1260870 - | hypothetical protein Tpen_1316 1264918 - 1261982 - | hypothetical protein Tpen_1317 1265802 - 1264915 - | CRISPR-associated RAMP Cmr6 family protein Tpen_1318 1267571 - 1265808 - | hypothetical protein Tpen_1319 1268075 - 1267578 - | CRISPR-associated Cmr5 family protein Tpen_1320 1269082 - 1268072 - | CRISPR-associated RAMP Cmr4 family protein family protein TERM 558 1269191 - 1269203 + r 70 -6.3 -4.20883 | AAGGCTTATAAAGCG TTGAC GGT GTCAA TTTTAAGAGTTTTTC TERM 559 1271857 - 1271846 - R 72 -7.2 -4.2528 | TTTGAACTGAAGAAA CGGG ACTA CCCG CACGCGAAACATGGC TERM 560 1273337 - 1273368 + r 73 -11.6 -2.76105 | opp_overlap 1273337, overlap 1273336 1273357 CTGATTTTGAACTGA GGGGTTTGCGGGAG CTTC TTCCCGCAAATCCG GGTTTTATTTCTCTG TERM 561 1273357 - 1273370 + r 83 -5.2 -5.07523 | opp_overlap 1273337, overlap 1273337 1273336 TTGCGGGAGCTTCTT CCCG CAAATC CGGG TTTTATTTCTCTGTG TERM 562 1273530 - 1273518 - R 70 -6.3 -4.20883 | GAAAAACTCTTAAAA TTGAC ACC GTCAA CGCTTTATAAGCCTT Tpen_1321 1274609 - 1273626 - | CRISPR-associated Cas1 family protein TERM 563 1274227 - 1274263 + g 83 -13.7 -3.41527 | GCTGGGTCGGGAGGC TCGGGGAGCGCGGGG AGCCTTC CCCCGCGGTTCCTGA TTATGCTCGCCATTC TERM 564 1274728 - 1274740 + r 71 -9.1 -3.4285 | CCTCTCCTGGTCGAC GCTGG AGA CCAGC TTGTAGATTAGCTCG Tpen_1322 1275451 - 1275170 - | CRISPR-associated Cas2 family protein Tpen_1323 1277577 - 1275472 - | DEAD/DEAH box helicase domain-containing protein TERM 565 1277296 - 1277260 - G 71 -10.1 -3.53444 | GGAGTCTCCGCCAAA GCCCTCCAAGGGTCTAG CGC CCAGAGCCTCCGAGAGC GCCGAGGCAACGGTC Tpen_1324 1278268 - 1277588 - | hypothetical protein Tpen_1325 1279407 - 1278283 - | hypothetical protein Tpen_1326 1279880 - 1279404 - | hypothetical protein Tpen_1327 1281731 - 1279881 - | hypothetical protein Tpen_1328 1283400 - 1282813 - | ABC transporter related Tpen_1329 1283830 - 1283402 - | hypothetical protein Tpen_1330 1284986 - 1283820 - | hypothetical protein Tpen_1331 1285493 - 1285032 - | hypothetical protein TERM 566 1285499 - 1285511 + r 74 -3.3 -4.96848 | TTGTTTTCATGTTTG TCCCC CTC GGCGA TTTTTCTGTGAAAAG TERM 567 1285520 - 1285534 + r 100 -2.2 -6.34424 | overlap 1285513 1285512 TCGGCGATTTTTCTG TGAAAA GGT TTTTTA TTTTTTTTTTGGCAG TERM 568 1285575 - 1285592 + r 79 -3.5 -5.10208 | AGAATTACTTAATAT TTTTGAA ACAT TTCGAAA TTTTTCTTCACGTTC Tpen_1332 1286530 - 1285613 - | ABC-type transport system involved in multi-copper enzyme maturation permease component-like Tpen_1333 1287471 - 1286524 - | ABC transporter related TERM 569 1286595 - 1286647 + g 72 -9.8 -3.67597 | gap 1, overlap 1286598 TGTATGTTAAGGGTT CTACGGCGGCTCCGTGCTTTTC-AG CGAC CTCGATGAGCGCGGAGACGCGGTCG TTCTTCGCTAAAACC Tpen_1334 1289266 - 1287476 - | membrane protein-like TERM 570 1287526 - 1287514 - G 77 -7.7 -4.26344 | overlap 1287517 AGACCGCGACTAAAA GCACT ACT AGTGC GAGTAGAGCTCCCAG Tpen_1335 1289746 - 1289339 - | hypothetical protein TERM 571 1289510 - 1289532 + g 74 -6.2 -4.45083 | TTCGGGGTCTTTCGC GGCTAGTTCT TCG AGGGCGAGCC TTTTCTGCCTGTGGG TERM 572 1289679 - 1289702 + g 78 -6 -4.61747 | gap 1, overlap 1289678 1289696 ACGCCTTTCTCGAAC TCTTC-GAGGG CTA CCCTCAGGAGG TTTTCTGCTTCTTCA Tpen_1336 1289823 - 1290185 + | DNA polymerase beta subunit Tpen_1337 1290230 - 1290439 + | hypothetical protein TERM 573 1290653 - 1290675 + F 81 -8.4 -4.3129 | overlap 1290654 TTTTTGCACAGTAAT TCCTGGATGC CCC GTGTCCAGGG TTTTGGTCGTCGCTA TERM 574 1290654 - 1290674 + F 70 -9.7 -3.18292 | overlap 1290653 TTTTGCACAGTAATT CCTGGATGC CCC GTGTCCAGG GTTTTGGTCGTCGCT Tpen_1338 1290666 - 1292273 + | hypothetical protein Tpen_1339 1292465 - 1292286 - | hypothetical protein Tpen_1340 1292958 - 1292716 - | AbrB family transcriptional regulator Tpen_1341 1293056 - 1293496 + | hypothetical protein Tpen_1342 1293538 - 1294374 + | CRISPR-associated protein APE2256 family Tpen_1343 1294446 - 1295411 + | chromosome segregation ATPases-like Tpen_1344 1296478 - 1295459 - | ATPase Tpen_1345 1296696 - 1296866 + | hypothetical protein Tpen_1346 1297682 - 1297356 - | CopG family transcriptional regulator Tpen_1347 1298874 - 1297762 - | hypothetical protein TERM 575 1299216 - 1299226 + G 74 -8.2 -4.1899 | AACGCTGATGGTGAA CGGG TCG CCCG TTTTACCTGGCGTAG Tpen_1348 1298935 - 1300320 + | hypothetical protein Tpen_1349 1300433 - 1301275 + | xylose isomerase domain-containing protein Tpen_1350 1301268 - 1302689 + | amidohydrolase Tpen_1351 1303672 - 1302737 - | abortive infection protein Tpen_1352 1306297 - 1303733 - | DEAD/DEAH box helicase domain-containing protein Tpen_1353 1307127 - 1306294 - | hypothetical protein TERM 576 1306371 - 1306345 - G 83 -14.4 -3.06796 | overlap 1306357 GCTCACGGCAGTTAA GCCCGCGAGCAA CCC TTGCCCGAGGGC CTCCCCGGCGAGCCG Tpen_1354 1308806 - 1307106 - | CRISPR-associated helicase Cas3 TERM 577 1307760 - 1307744 - G 79 -13.7 -3.13403 | overlap 1307742 CCTCGTCCAGGAAGA CGACGGC GTG GCCGTCG CTCCTCCGCGCGCAC Tpen_1355 1310218 - 1308803 - | hypothetical protein Tpen_1356 1311671 - 1310694 - | CRISPR-associated autoregulator DevR family protein protein Tpen_1357 1312187 - 1311678 - | hypothetical protein Tpen_1358 1312920 - 1312213 - | transcriptional regulator, TrmB Tpen_1359 1313969 - 1313241 - | hypothetical protein Tpen_1360 1314921 - 1314088 - | hypothetical protein TERM 578 1314474 - 1314519 + g 74 -11.1 -3.53012 | gap 1 GGTGCGCCAGTGCGA GCGGGAGGTCCG-GGACGAG CCTGTAC CTCCTCCTCGGACCCCCGGC TTTGAGCAGCGACCC TERM 579 1315003 - 1315020 + r 78 -9.1 -3.99216 | opp_overlap 1314992 1315002 1315003, overlap 1315015 CATACCGCCGTAAAT TCCCGGC AGAG GTCGGGA TTTCGATTTTCTGTT TERM 580 1315348 - 1315318 - R 72 -8.3 -3.74224 | gap 2, opp_overlap 1315318 1315321, overlap 1315319 1315321 GTGAAAGCATTGAAA GGACG-CC-GAGGCG AGC CGCCTCAGGGCGTCG TTCGTGCCGAAGCAA TERM 581 1315347 - 1315319 - R 75 -11.8 -2.84053 | gap 2, opp_overlap 1315318 1315321, overlap 1315318 1315321 TGAAAGCATTGAAAG GACG-CC-GAGGCG AGC CGCCTCAGGGCGTC GTTCGTGCCGAAGCA TERM 582 1315343 - 1315321 - R 71 -11.2 -2.96232 | opp_overlap 1315318 1315321, overlap 1315319 1315318 AAAGCATTGAAAGGA CGCCGAGGCG AGC CGCCTCAGGG CGTCGTTCGTGCCGA Tpen_1361 1318458 - 1315699 - | hypothetical protein TERM 583 1315836 - 1315858 + g 82 -13.4 -3.32536 | overlap 1315836 1315839 GGAGCCTTACTCCGT GCTCGCCGAG GAG CTCGGAGAGC TTCTCGAAGTCCTTT Tpen_1362 1319549 - 1318443 - | CRISPR-associated RAMP Csm5 family protein Tpen_1363 1320549 - 1319551 - | hypothetical protein TERM 584 1320083 - 1320099 + g 75 -9.3 -3.82824 | ACGTCGGTCGGGGTA GCCCCCG CGA CGGCGGC TTCTTCTCCATCGTC Tpen_1364 1321550 - 1320555 - | CRISPR-associated RAMP Csm3 family protein Tpen_1365 1321975 - 1321556 - | hypothetical protein TERM 585 1322680 - 1322694 + G 72 -8.6 -3.8211 | TCCGCGCTGCTCTGG GAGCTT ACG AAGCTC TTCTTCTCGGTGCCC TERM 586 1322699 - 1322721 + G 71 -7.6 -3.99324 | overlap 1322700 TTACGAAGCTCTTCT TCTCGGTGCC CGC GGCGGCGAGG TTTCTCGTAGTGGAG Tpen_1366 1322020 - 1322988 + | hypothetical protein TERM 587 1323176 - 1323158 - g 75 -5.9 -4.56597 | opp_overlap 1323146, overlap 1323159 TGCGCCGGGGAAAAA GCCAGGC TTCTC GCCTGGT TGCGGAAGGGAAAGG Tpen_1367 1322978 - 1323454 + | hypothetical protein Tpen_1368 1323583 - 1323897 + | hypothetical protein TERM 588 1323900 - 1323919 + F 77 -12.1 -2.74322 | overlap 1323899 GTCTCCCCCATAGCT GCGCGCG AAAACA CGCGCGC CTTTCAACGCTTAAG TERM 589 1324755 - 1324726 - f 71 -2.7 -4.78848 | opp_overlap 1324731 1324732 1324738 1324738, overlap 1324732 TTCGTAAACAGAAAA TCGAAATCCCGAC CTCT GCCGGGAATTTGC GGCGGAAGGTTTTTG TERM 590 1324749 - 1324732 - f 78 -9.1 -3.99216 | opp_overlap 1324731 1324732 1324738 1324738, overlap 1324726 AACAGAAAATCGAAA TCCCGAC CTCT GCCGGGA ATTTGCGGCGGAAGG TERM 591 1324738 - 1324764 + F 70 -3.7 -4.64766 | gap 1, opp_overlap 1324732 1324726, overlap 1324732 1324731 1324738 AAATCGAAATCCCGA CC-TCTGCCG GGAATTTG CGGCGGAAGG TTTTTGCGCTGTGCC Tpen_1369 1324775 - 1325320 + | hypothetical protein Tpen_1370 1325850 - 1325329 - | PaREP8 domain-containing protein Tpen_1371 1326687 - 1325875 - | hypothetical protein Tpen_1372 1328092 - 1326695 - | alkylglycerone-phosphate synthase TERM 592 1327664 - 1327697 + gr 75 -11.8 -3.06737 | GTAGGACTGGGGTAT GTGCCTCAGCGTGA AGCCCC TCGCGTTGAGGTAC TCTTCGAGCTTCCTG Tpen_1373 1329495 - 1328056 - | carbohydrate kinase, FGGY Tpen_1374 1330438 - 1329497 - | hypothetical protein Tpen_1375 1331823 - 1330438 - | FAD dependent oxidoreductase TERM 593 1331718 - 1331752 + g 71 -11.4 -3.28712 | overlap 1331704 AGACGCCCCAGCCGG GCTCTGGGTTCGAGTC GAC GACTAGGACTCTGAGC TTGTAGCGGGACAGC Tpen_1376 1331903 - 1332724 + | competence damage-inducible protein A Tpen_1377 1332731 - 1333540 + | hypothetical protein Tpen_1378 1334046 - 1333636 - | hypothetical protein Tpen_1379 1334276 - 1334049 - | hypothetical protein Tpen_1380 1335200 - 1334460 - | hypothetical protein Tpen_1381 1336288 - 1335251 - | AAA ATPase TERM 594 1335526 - 1335547 + g 71 -10.1 -3.58343 | CTTCGAGTTGCAGGG GCGTTAGCC TTGA GGCGAACGC TTTAAGCCTCCTGGC Tpen_1382 1337248 - 1336331 - | spermine synthase Tpen_1383 1337670 - 1337392 - | hypothetical protein TERM 595 1337433 - 1337449 + g 73 -2.9 -4.76963 | overlap 1337434 TTTCCAGTCTCTCCT TGATCTC TTT GAGCTCG TTTTCTATTCTCTCC TERM 596 1337720 - 1337733 + H 73 -3.9 -4.87318 | TTATGCATTTGTATG TATAC ATGA GTATA TTTTTCGATTTTAAA Tpen_1384 1337847 - 1339703 + | ferredoxin Tpen_1385 1340887 - 1339670 - | major facilitator transporter TERM 597 1340941 - 1340953 + H 71 -10.5 -2.93858 | CCGCAAGACGTATAC GGCGC CGC GCGCC TATCTAGCTGTGGTA Tpen_1386 1340963 - 1341817 + | methyltransferase type 12 Tpen_1387 1342650 - 1341823 - | alpha/beta hydrolase fold Tpen_1388 1342970 - 1344304 + | peptidase S8 and S53, subtilisin, kexin, sedolisin TERM 598 1344442 - 1344423 - f 71 -10.8 -2.84527 | overlap 1344422 CAATGTTTATTAAAT GGTATACC TTGC GGTATACC GCGTATGAGCGCGAC Tpen_1389 1344447 - 1344680 + | hypothetical protein Tpen_1390 1344667 - 1345074 + | PilT domain-containing protein Tpen_1391 1345965 - 1345078 - | beta-lactamase domain-containing protein Tpen_1392 1346144 - 1346545 + | hypothetical protein TERM 599 1347744 - 1347760 + G 83 -12.3 -3.85698 | opp_overlap 1347759 CCCGGAGCTAGCCAG GCTCGTC GGA GACGAGC TTTATAAGCGGGCGG Tpen_1393 1346653 - 1347837 + | hypothetical protein TERM 600 1348704 - 1348748 + G 88 -15.7 -3.04144 | opp_overlap 1348708, overlap 1348707 ACCTGGAGGGGTTGC AGAAGTCGTCGAGGCAGAGGT ACG ACCGCTCCCTCGACGACCTCG TCTTGAAGCTCGAGA TERM 601 1348707 - 1348745 + G 86 -16 -2.74523 | opp_overlap 1348708, overlap 1348704 TGGAGGGGTTGCAGA AGTCGTCGAGGCAGAGGT ACG ACCGCTCCCTCGACGACC TCGTCTTGAAGCTCG TERM 602 1348744 - 1348708 - g 100 -19.5 -3.29144 | opp_overlap 1348707 1348704 GGAGGGGTTGCAGAA GTCGTCGAGGCAGAGGT ACG ACCGCTCCCTCGACGAC CTCGTCTTGAAGCTC Tpen_1394 1347845 - 1349524 + | hypothetical protein Tpen_1395 1349534 - 1350424 + | pyridoxal-5'-phosphate-dependent enzyme, beta subunit Tpen_1396 1351101 - 1350649 - | HEPN domain-containing protein Tpen_1397 1351609 - 1351094 - | DNA polymerase beta subunit TERM 603 1351623 - 1351637 + r 93 -10 -4.55295 | ATTTCGCGATTCTAG TCCCTG TCT CAGGGA TTTATTTCTACCGCG Tpen_1398 1352512 - 1351676 - | ABC-2 type transporter Tpen_1399 1353326 - 1352490 - | ABC-2 type transporter Tpen_1400 1354317 - 1353313 - | daunorubicin resistance ABC transporter ATPase subunit Tpen_1401 1354451 - 1354876 + | PadR-like family transcriptional regulator TERM 604 1354892 - 1354878 - f 77 -8.6 -4.11295 | CGAAACCTACATAAA TATCGG TTA CCGATA TGCCTCCAATAAAGG Tpen_1402 1354892 - 1356460 + | hypothetical protein Tpen_1403 1356467 - 1357648 + | hypothetical protein Tpen_1404 1357641 - 1358372 + | ABC transporter related Tpen_1405 1358701 - 1358369 - | hypothetical protein TERM 605 1358785 - 1358757 - R 83 -5.9 -5.02074 | TTATCGCCTAAAAAA GGCTCAAGTCGAG AAG CCCACCTTGACCC CGAAGAAGTCCTTCA Tpen_1406 1359230 - 1358760 - | hypothetical protein Tpen_1407 1359460 - 1359690 + | hypothetical protein Tpen_1408 1359691 - 1363203 + | formate dehydrogenase Tpen_1409 1363205 - 1364065 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Tpen_1410 1364065 - 1364787 + | formate dehydrogenase, cytochrome b556 subunit (formate dehydrogenase gamma subunit) Tpen_1411 1364821 - 1365450 + | hypothetical protein Tpen_1412 1365437 - 1365985 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Tpen_1413 1365988 - 1367865 + | aldehyde ferredoxin oxidoreductase Tpen_1414 1367996 - 1368487 + | PaREP8 domain-containing protein Tpen_1415 1368869 - 1368510 - | DNA polymerase beta subunit Tpen_1416 1369504 - 1368866 - | hypothetical protein Tpen_1417 1369797 - 1371017 + | aminotransferase, class I and II Tpen_1418 1371051 - 1371746 + | hypothetical protein TERM 606 1372482 - 1372496 + G 70 -2.7 -4.84359 | AGCTGGGGGAGGACG CGACC CTGGA GGACG TTTTTATGAGGCTCG Tpen_1419 1371785 - 1372525 + | ABC transporter related Tpen_1420 1372518 - 1374092 + | hypothetical protein Tpen_1421 1374110 - 1374796 + | hypothetical protein Tpen_1422 1375164 - 1374793 - | DNA polymerase beta subunit Tpen_1423 1375316 - 1376002 + | formylmethanofuran dehydrogenase, subunit E region Tpen_1424 1375999 - 1377123 + | periplasmic binding protein Tpen_1425 1377127 - 1378164 + | transport system permease protein Tpen_1426 1378151 - 1378915 + | ABC transporter related Tpen_1427 1378948 - 1381356 + | plasma-membrane proton-efflux P-type ATPase Tpen_1428 1382692 - 1381370 - | cytochrome c biogenesis protein, transmembrane region Tpen_1429 1383071 - 1383445 + | hypothetical protein Tpen_1430 1383566 - 1384036 + | redoxin domain-containing protein Tpen_1431 1385391 - 1384033 - | phosphotransferase domain-containing protein TERM 607 1385740 - 1385754 + H 76 -12.8 -2.50816 | opp_overlap 1385731 1385735 1385734, overlap 1385739 AAGGAAGAACGCCTC GCGCGC TGC GCGCGC CTTAATACGTAACGA Tpen_1432 1385974 - 1386231 + | hypothetical protein Tpen_1433 1386206 - 1386607 + | DNA polymerase beta subunit Tpen_1434 1387132 - 1386803 - | hypothetical protein Tpen_1435 1387700 - 1388035 + | hypothetical protein Tpen_1436 1388042 - 1388443 + | hypothetical protein Tpen_1437 1388998 - 1388453 - | hypothetical protein Tpen_1438 1390195 - 1389068 - | hypothetical protein TERM 608 1389334 - 1389296 - G 76 -4.5 -4.81551 | gap 1, overlap 1389298 GATCCAGAGGAAAAA CGCGCCGTTCCCGAAGCC GTTC AACGTCGAGAA-GGCGAG TAGGATCGTGGCGAG TERM 609 1390331 - 1390341 + H 71 -3.2 -4.83615 | TTTAGCTGTCCGAGG GCTG GTA TAGC TTTTTGTCGAAACTG TERM 610 1390343 - 1390368 + H 77 -6.3 -4.59773 | overlap 1390344 AGGGCTGGTATAGCT TTTTGTCGAAA CTGT TTTCGATAAAG TTTTTAAGAATGAAA Tpen_1439 1390378 - 1391094 + | hypothetical protein Tpen_1440 1392710 - 1391091 - | hypothetical protein Tpen_1441 1393831 - 1392707 - | hypothetical protein Tpen_1442 1393982 - 1394827 + | hypothetical protein Tpen_1443 1395262 - 1394834 - | hypothetical protein Tpen_1444 1396316 - 1395477 - | NAD+ synthetase TERM 611 1395697 - 1395746 + g 71 -13 -2.62003 | gap 3, overlap 1395696 1395733 1395734 AGCTCGTACGGGGCT CCGAGCTCGCCCTCGGCTGTCTGGC CGG GCCAG--AGCCTGGGG-GAGCTTGG CTTCTCCACTATTCT Tpen_1445 1397152 - 1396313 - | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase TERM 612 1397220 - 1397209 - R 79 -4.4 -4.93296 | overlap 1397219 TTACTATGAGAAAAA GCTT TTAG AAGC CAGGGGAGCTACGCG Tpen_1446 1398497 - 1397229 - | ABC-2 type transporter Tpen_1447 1399426 - 1398494 - | ABC transporter related Tpen_1448 1399595 - 1399948 + | hypothetical protein Tpen_1449 1400068 - 1400922 + | UbiA prenyltransferase Tpen_1450 1400919 - 1401512 + | phosphatidate cytidylyltransferase Tpen_1451 1402890 - 1401556 - | binding-protein-dependent transport systems inner membrane component Tpen_1452 1403789 - 1402887 - | binding-protein-dependent transport systems inner membrane component Tpen_1453 1405086 - 1403839 - | extracellular solute-binding protein TERM 613 1404670 - 1404691 + g 71 -10.1 -3.61715 | GCGGTACTCTATAGC GTTCTGCCC TATC GGGCTGAAC TTGTTCAGCACGCTG Tpen_1454 1407378 - 1405159 - | alpha amylase, catalytic region Tpen_1455 1408319 - 1407447 - | pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit Tpen_1456 1409980 - 1408316 - | pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein TERM 614 1408687 - 1408721 + g 76 -12.8 -3.12595 | overlap 1408685 CCTTCATTTTCCTAA GCCTTTTCTCGTGGCC CCT GGCCACGAGAACCGGG TCTTCCGTCGTTAAG TERM 615 1410171 - 1410159 - g 78 -3.4 -5.10767 | overlap 1410168 CATGCAAGAGAAAAA GTAC AAGAA GTAC AGGTGCACCGTGTGC Tpen_1457 1410145 - 1410321 + | rubredoxin-type Fe(Cys)4 protein Tpen_1458 1412269 - 1410335 - | alpha amylase, catalytic region Tpen_1459 1412789 - 1412448 - | DNA polymerase beta subunit TERM 616 1412793 - 1412815 + r 71 -9.2 -3.43217 | opp_overlap 1412789 CTTTGAGAGCATCCA GGATCGTATA CGC TATACGAGCC TTAATTACCTTTACC Tpen_1460 1413568 - 1413047 - | hypothetical protein Tpen_1461 1413901 - 1414323 + | hypothetical protein Tpen_1462 1414380 - 1415138 + | ABC transporter related Tpen_1463 1415141 - 1416778 + | hypothetical protein Tpen_1464 1417125 - 1416775 - | PadR-like family transcriptional regulator Tpen_1465 1417177 - 1417824 + | class II aldolase/adducin family protein Tpen_1466 1418260 - 1417826 - | UspA domain-containing protein Tpen_1467 1419775 - 1418348 - | trimethylamine methyltransferase Tpen_1468 1420431 - 1419775 - | methionine synthase Tpen_1469 1420518 - 1421207 + | hypothetical protein Tpen_1470 1422237 - 1421209 - | radical SAM domain-containing protein Tpen_1471 1423019 - 1422243 - | hypothetical protein Tpen_1472 1423446 - 1423039 - | PilT domain-containing protein Tpen_1473 1423746 - 1423480 - | hypothetical protein Tpen_1474 1424692 - 1423961 - | ABC-2 type transporter TERM 617 1424083 - 1424065 - G 74 -13.8 -2.55213 | overlap 1424061 GATCCATGCAACCTA GCCCGGCG ACC CACCGGGC GAGCTCTGCGAGGGC Tpen_1475 1425570 - 1424689 - | ABC transporter related Tpen_1476 1426044 - 1427090 + | hypothetical protein Tpen_1477 1427696 - 1427232 - | PilT domain-containing protein Tpen_1478 1427937 - 1427680 - | AbrB family transcriptional regulator Tpen_1479 1428091 - 1429644 + | potassium-transporting ATPase subunit A Tpen_1480 1429651 - 1431756 + | K+-transporting ATPase, B subunit TERM 618 1432060 - 1432019 - g 79 -13.8 -3.14693 | gap 1, overlap 1432017 1432015 1432034 1432035 GTTAGCAGGAAGACA GGCCTCCCAGAGGAACTCG TCGCC CGAGT-CCTCCGGGAGAAC GCGGAGAAGTACAGG Tpen_1481 1431758 - 1432183 + | hypothetical protein Tpen_1482 1432324 - 1433130 + | hypothetical protein Tpen_1483 1433876 - 1433175 - | hypothetical protein TERM 619 1434219 - 1434196 - g 75 -11.8 -3.31792 | overlap 1434199 GGAGGACTTCGAGAA GAACTCCTAC GGCT GCAGGAGTTC CCCGGACGCTTTCCT Tpen_1484 1433957 - 1434778 + | Mg2+ transporter protein, CorA family protein TERM 620 1434809 - 1434799 - f 75 -5.4 -4.59984 | AAAATTTATAGAAAA GCTT TAT AAGC AATGATAGTATAGGA Tpen_1485 1434834 - 1436246 + | extracellular solute-binding protein TERM 621 1437046 - 1437022 - g 71 -7.7 -4.06502 | CATCGTGAAAGGAAA GGTTGCCGAGG TAG CCCCGGACACC GGGGAGCTCGTCGTA Tpen_1486 1436294 - 1437370 + | ABC transporter related TERM 622 1438282 - 1438301 + G 88 -10.7 -4.44797 | CTACCTAGCGCTTTT CGTGGGG CTCCTT CCCCACG TTTTCGTCTTCGTGA Tpen_1487 1437380 - 1439014 + | binding-protein-dependent transport systems inner membrane component TERM 623 1439048 - 1439008 - T 81 -11.2 -3.61398 | gap 1, overlap 1439011 GCTCGCCTCCAAGAA GAGGTAGAGC-CCCGAGGC TTTC ACCTCAGGTGCTCCACGTC GCCGGCGTCTACGGT TERM 624 1439045 - 1439011 - T 73 -11.5 -2.63073 | gap 1, overlap 1439008 CGCCTCCAAGAAGAG GTAGAGC-CCCGAGGC TTTC ACCTCAGGTGCTCCAC GTCGCCGGCGTCTAC Tpen_1488 1439996 - 1439028 - | biotin--acetyl-CoA-carboxylase ligase Tpen_1489 1440601 - 1439978 - | hypothetical protein TERM 625 1440346 - 1440329 - G 81 -12.7 -3.61715 | GAGGGGGTCGAAGAA GCCCAGC AGTA GCTGGGC GGCCGTAGAAGAGAC TERM 626 1440553 - 1440567 + g 76 -12.8 -3.05384 | opp_overlap 1440516 1440513 TAAGCCTGACCCTGC CCGCGC CGG GCGCGG TTACCTCACAGAGCA Tpen_1490 1441811 - 1440585 - | ABC transporter related Tpen_1491 1442499 - 1441837 - | BioY protein Tpen_1492 1442592 - 1443239 + | hypothetical protein TERM 627 1443248 - 1443226 - T 74 -10.4 -3.53811 | TCTACGTGCTCCAAA GGGCGGAGGC CTA GCCAGCGCCC AGGTACGCGAATAGA TERM 628 1443286 - 1443268 - T 72 -6.6 -4.21142 | overlap 1443271 ACGCGAATAGAGAAA GTAGGCCC CGA AGGCCTGC CGGGAAAAACCTTTT Tpen_1493 1444012 - 1443326 - | beta-lactamase domain-containing protein TERM 629 1444249 - 1444301 + G 74 -11.2 -3.53761 | gap 1, overlap 1444252 TACCGTCCATAGTGA CTGCCGACGGCCCCT-CTGGGCTCA GGGT TGAGCCTAGCGGGGGGCGCAGGTGG TTTGCGACAGCCTTC TERM 630 1445081 - 1445110 + G 71 -7.2 -4.15044 | overlap 1445086 CAAGAACGAGGGAGC GCTACCCCTGG-GC CCCG GCGCCAGG-GTGGC TTTATTCGGGACGGG Tpen_1494 1444122 - 1446227 + | glycoside hydrolase family 3 protein Tpen_1495 1446559 - 1446254 - | AbrB family transcriptional regulator Tpen_1496 1447125 - 1446820 - | hypothetical protein Tpen_1497 1448516 - 1447203 - | peptidase U34, dipeptidase Tpen_1498 1450703 - 1448655 - | hypothetical protein TERM 631 1451081 - 1451108 + G 76 -13.4 -2.79183 | TGCTCTACTCGGCGT TCTTCCTCGGCC TCTC GGCCGGGGAAGC TCTGCTAACGCTACA Tpen_1499 1450819 - 1451217 + | transcriptional regulator, TrmB Tpen_1500 1451317 - 1451565 + | hypothetical protein Tpen_1501 1452050 - 1451562 - | PaREP8 domain-containing protein Tpen_1502 1452186 - 1452464 + | hypothetical protein Tpen_1503 1452461 - 1452736 + | hypothetical protein Tpen_1504 1452969 - 1452724 - | hypothetical protein Tpen_1505 1454268 - 1453078 - | cytochrome bd-type quinol oxidase subunit 1-like Tpen_1506 1455890 - 1454265 - | cytochrome bd ubiquinol oxidase, subunit I Tpen_1507 1456031 - 1457473 + | hypothetical protein Tpen_1508 1457486 - 1457977 + | hydrogenase maturation protease Tpen_1509 1458838 - 1457960 - | transcriptional regulator, TrmB TERM 632 1458121 - 1458147 + g 82 -13.8 -3.32343 | overlap 1458119 CCGCGGGAACCCCCG TCGGGTAGTACA CGG TGTACTTCCCGA TTCTAACCCTCTGGA TERM 633 1458433 - 1458396 - G 88 -16.3 -3.06183 | overlap 1458398 GTTAGCGTGAGGTAA GAGGTAGCGGCGACCGC CGCC ACGGCAACCGCTACCTC GGCTACGGGCGGGGA TERM 634 1458431 - 1458398 - G 76 -13.1 -3.08996 | overlap 1458396 TAGCGTGAGGTAAGA GGTAGCGGCGACCGC CGCC ACGGCAACCGCTACC TCGGCTACGGGCGGG Tpen_1510 1459269 - 1458868 - | hypothetical protein Tpen_1511 1460698 - 1459316 - | Alpha-galactosidase Tpen_1512 1461205 - 1460819 - | hypothetical protein Tpen_1513 1461612 - 1462883 + | amino acid permease-associated region Tpen_1514 1462908 - 1463669 + | hypothetical protein Tpen_1515 1463935 - 1463666 - | hypothetical protein Tpen_1516 1463999 - 1464985 + | alcohol dehydrogenase TERM 635 1465280 - 1465268 - g 78 -3.3 -5.14563 | CCGTCGAGCAAAAAA TCGGG GCG CTCGA ACAAAGGTTCAACTC Tpen_1517 1465039 - 1465485 + | hypothetical protein Tpen_1518 1466449 - 1465511 - | phosphoesterase, DHHA1 TERM 636 1466460 - 1466471 + H 70 -5.8 -4.29304 | opp_overlap 1466441, overlap 1466457 1466467 GCCACAAGAACTCTT CCTG GAGG CAGG TTTATATTCTGCTCG Tpen_1519 1466546 - 1466869 + | dinitrogenase iron-molybdenum cofactor biosynthesis Tpen_1520 1466869 - 1467270 + | thioesterase superfamily protein Tpen_1521 1467282 - 1467887 + | abortive infection protein TERM 637 1468074 - 1468063 - f 70 -5.8 -4.29391 | AACCATAAAAGGAAA GCGA TTTA TCGC CAGACGTCCGAAGAG TERM 638 1468783 - 1468767 - g 80 -10.8 -3.9534 | ATCGAGACGGAGAAA GCGGCG GGGTA CGCCGC GAGGTTGACGAATGC Tpen_1522 1468101 - 1468943 + | hypothetical protein Tpen_1524 1470438 - 1471007 + | hypothetical protein Tpen_1525 1471073 - 1472482 + | hypothetical protein Tpen_1526 1472484 - 1474061 + | hypothetical protein Tpen_1527 1474332 - 1474559 + | hypothetical protein Tpen_1528 1475534 - 1474599 - | peptidase S1 and S6, chymotrypsin/Hap TERM 639 1475068 - 1475086 + g 72 -4.6 -4.65895 | overlap 1475070 ACCGGCGCGTCCGTC TGTATGAG GTT CTCGTATA TTTTTCCCTCGGCCC Tpen_1529 1475620 - 1476804 + | major facilitator transporter Tpen_1530 1476857 - 1477588 + | ABC transporter related Tpen_1531 1477566 - 1478786 + | SufBD protein Tpen_1532 1480701 - 1478791 - | phosphoenolpyruvate carboxykinase Tpen_1533 1482152 - 1480794 - | citrate transporter Tpen_1534 1482337 - 1482912 + | hypothetical protein Tpen_1535 1482914 - 1483705 + | cobalt transport protein Tpen_1536 1484654 - 1483986 - | hypothetical protein Tpen_1537 1484901 - 1485878 + | threonine synthase Tpen_1538 1485857 - 1486918 + | hypothetical protein Tpen_1539 1486921 - 1488375 + | hypothetical protein Tpen_1540 1488388 - 1488900 + | hypothetical protein TERM 640 1490602 - 1490590 - g 77 -7.7 -4.30995 | overlap 1490587 1490593 TTGTCGAGAAAAGAA CTAGC TAT GCTAG CACGTAGCAGGACGC Tpen_1541 1488979 - 1490625 + | ABC transporter related Tpen_1542 1490705 - 1491658 + | paREP7 Tpen_1543 1491780 - 1492532 + | hypothetical protein TERM 641 1492975 - 1492953 - gf 73 -11.3 -2.67515 | gap 1, overlap 1492950 GGTACGAGGAGAGGA GCCCCTCGGA GCTC TCCG-GGGGC GAGAAGCAAAGGCTA Tpen_1544 1492535 - 1494067 + | ABC transporter related Tpen_1545 1494027 - 1494857 + | cobalt transport protein Tpen_1546 1494838 - 1495812 + | hypothetical protein Tpen_1547 1496887 - 1495826 - | ABC transporter related Tpen_1548 1497701 - 1496889 - | binding-protein-dependent transport systems inner membrane component Tpen_1549 1498558 - 1497704 - | binding-protein-dependent transport systems inner membrane component Tpen_1550 1499859 - 1498573 - | extracellular solute-binding protein Tpen_1551 1499991 - 1501019 + | transcriptional regulator, TrmB Tpen_1552 1501021 - 1503177 + | hypothetical protein Tpen_1553 1504323 - 1503235 - | spermidine/putrescine ABC transporter ATPase subunit Tpen_1554 1504467 - 1505531 + | extracellular solute-binding protein Tpen_1555 1505507 - 1507192 + | binding-protein-dependent transport systems inner membrane component TERM 642 1507223 - 1507213 - g 72 -5.4 -4.46775 | overlap 1507214 CAGTTAAAACATAAA TGCT CCT AGCA TCCAGTAGCGAAGAG Tpen_1556 1507212 - 1507565 + | HEPN domain-containing protein Tpen_1558 1507998 - 1508807 + | major facilitator superfamily permease Tpen_1559 1510182 - 1508827 - | L-fucose isomerase and related proteins-like Tpen_1560 1510376 - 1511410 + | ABC transporter related Tpen_1561 1511412 - 1512170 + | ABC-2 type transporter Tpen_1562 1512876 - 1512175 - | transcriptional regulator, TrmB Tpen_1563 1513590 - 1512877 - | putative circadian clock protein, KaiC Tpen_1564 1513668 - 1515149 + | anion transporter TERM 643 1515517 - 1515505 - g 72 -4.7 -4.57073 | GATCGCGCTGAAAAA GCCCG TCT CCGGC CCCAAGTGGGCAACG TERM 644 1515904 - 1515946 + G 72 -9.9 -3.66018 | gap 2 TTCGCCGAGCCAGCC GCACGTCGC-GCT-CGTGG CGCTGGC CCTCGTAGCCGCGGCGTGC TTCTTCGCCTGGTAC Tpen_1565 1515137 - 1516006 + | hypothetical protein Tpen_1566 1516041 - 1517366 + | beta-lactamase domain-containing protein Tpen_1567 1517363 - 1518652 + | phosphonopyruvate decarboxylase-related protein Tpen_1568 1519167 - 1518745 - | hypothetical protein Tpen_1569 1519511 - 1519143 - | hypothetical protein TERM 645 1519325 - 1519335 + g 71 -6.8 -4.1899 | overlap 1519315 1519313 CGCGGTGCTCCTTGA GGAG CCT CTCC TTTTCCCTAGCGTAG Tpen_1570 1519681 - 1520346 + | peroxidase TERM 646 1520335 - 1520351 + F 71 -2.3 -4.97159 | TTCTGCTACAAATCC CTAGA GAAGTAG TCTAG TTATTTTTTGTTTTT TERM 647 1521338 - 1521383 + G 78 -11.1 -3.68569 | gap 1, opp_overlap 1521339, overlap 1521339 GACGTCTTCGAGAAA ACTGCGGAGCGC-CTCGGCGAG GAG TTCGACGAGAGGGCTTCGCAGG TTCTTGAGTGCATGA TERM 648 1521382 - 1521339 - g 93 -11.7 -4.37092 | gap 1, opp_overlap 1521338 1521339 ACGTCTTCGAGAAAA CTGCGGAGCGC-CTCGGCGA GGAGT TCGACGAGAGGGCTTCGCAG GTTCTTGAGTGCATG TERM 649 1521339 - 1521382 + G 80 -14.6 -2.8082 | gap 1, opp_overlap 1521339, overlap 1521338 ACGTCTTCGAGAAAA CTGCGGAGCGC-CTCGGCGAG GAG TTCGACGAGAGGGCTTCGCAG GTTCTTGAGTGCATG Tpen_1571 1520423 - 1521724 + | hypothetical protein TERM 650 1522037 - 1522048 + G 71 -7.2 -4.15044 | GAAGGTGGTCCTGAT GCCC AGGA GGGC TTTCTTCCCGGGAAA TERM 651 1522078 - 1522100 + G 83 -5.5 -4.91109 | gap 1, overlap 1522078 1522079 ACCCGGTCTACCTGG C-CCCGGACG ACTT CGTCAGGGAG TTTTTCTCGTACCCC Tpen_1572 1521708 - 1523303 + | hypothetical protein Tpen_1573 1523371 - 1524546 + | metallophosphoesterase Tpen_1574 1524540 - 1527062 + | SMC domain-containing protein Tpen_1575 1527100 - 1528062 + | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding TERM 652 1528165 - 1528148 - f 79 -4.7 -5.00616 | overlap 1528149 1528150 1528158 GTTTTTCGTAAAAAA TGCCGCA CAAG CGCGGCG GCCCGGGCGGGCGCT TERM 653 1529164 - 1529180 + G 74 -11.5 -3.55444 | opp_overlap 1529164 GCCGCAGAGCTCAAA GCCCCGG CTG TCGGGGC TTTCGCCGCTAAGAC TERM 654 1529180 - 1529164 - g 75 -10.8 -3.63627 | opp_overlap 1529164 GCCGCAGAGCTCAAA GCCCCG GCTGT CGGGGC TTTCGCCGCTAAGAC Tpen_1576 1528285 - 1529568 + | extracellular ligand-binding receptor Tpen_1577 1529587 - 1530546 + | inner-membrane translocator Tpen_1578 1530543 - 1531577 + | inner-membrane translocator Tpen_1579 1531561 - 1532346 + | ABC transporter related Tpen_1580 1532330 - 1533043 + | ABC transporter related Tpen_1581 1533774 - 1533064 - | glycerophosphoryl diester phosphodiesterase Tpen_1582 1534568 - 1533798 - | radical SAM domain-containing protein TERM 655 1534540 - 1534514 - G 80 -14.4 -2.71011 | AGCCCCGCGCAACCA TCCTCCGCACGG CCT CCGCGAGGAGGA TGGGGTCGTAGCCGC Tpen_1583 1535445 - 1534558 - | hypothetical protein TERM 656 1535495 - 1535477 - R 76 -7.4 -4.20696 | GTAGCAACTCTAAAA CGCTTCCT CAC AGCAAGCG TAGACCAAGCTATAG Tpen_1584 1536575 - 1535505 - | ATPase TERM 657 1536610 - 1536596 - R 72 -10 -3.35813 | CCGCACCGGAAGTAA CTTCCG CAC CGGAAG TAATAAGCCTGTCGT Tpen_1585 1537168 - 1536683 - | GCN5-related N-acetyltransferase TERM 658 1536804 - 1536814 + g 71 -6.8 -4.21319 | AGCTTCCGGAAGAGG GCCT GGG AGGC TTTGTTCGACTTCCT Tpen_1586 1537819 - 1537193 - | pyrrolidone-carboxylate peptidase Tpen_1587 1538755 - 1537862 - | hypothetical protein Tpen_1588 1538899 - 1540257 + | extracellular solute-binding protein TERM 659 1540701 - 1540721 + G 85 -11.1 -4.08216 | opp_overlap 1540701, overlap 1540702 TTATGTTCGACGATA GCCTGGGGA TTT TCCCCAGGA TTTTCGGCGCGCTAG TERM 660 1540702 - 1540720 + G 83 -14.6 -3.04715 | opp_overlap 1540701, overlap 1540701 TATGTTCGACGATAG CCTGGGGA TTT TCCCCAGG ATTTTCGGCGCGCTA Tpen_1589 1540301 - 1541194 + | binding-protein-dependent transport systems inner membrane component Tpen_1590 1541191 - 1542030 + | binding-protein-dependent transport systems inner membrane component Tpen_1591 1543077 - 1542040 - | transcriptional regulator, TrmB TERM 661 1543723 - 1543695 - g 70 -3.7 -4.63527 | opp_overlap 1543704, overlap 1543699 GGAGTACGTTAAAAA GGAGTTCGAGGAC AGA GTCCTGGTATCCC CGCCTAGCATAGATC Tpen_1592 1543135 - 1544379 + | glycosyl transferase, group 1 Tpen_1593 1545211 - 1544444 - | daunorubicin resistance ABC transporter, inner membrane subunit B Tpen_1594 1546186 - 1545215 - | daunorubicin resistance ABC transporter ATPase subunit Tpen_1595 1546649 - 1546176 - | PadR-like family transcriptional regulator Tpen_1596 1547207 - 1546998 - | hypothetical protein Tpen_1597 1547530 - 1547300 - | hypothetical protein Tpen_1598 1548249 - 1547662 - | hypothetical protein Tpen_1599 1548268 - 1549533 + | major facilitator transporter Tpen_1600 1550472 - 1549573 - | phosphate uptake regulator, PhoU Tpen_1601 1550540 - 1551049 + | hypothetical protein Tpen_1602 1551069 - 1551749 + | CRISPR-associated Cas4 family protein Tpen_1603 1552255 - 1551752 - | hypothetical protein TERM 662 1552346 - 1552335 - H 75 -4.4 -4.86001 | ACCAGGCGAGAAAAA CTGT GATA ACAG ACTTTCAGCATGGTG Tpen_1604 1552471 - 1552977 + | nuclease Tpen_1605 1552983 - 1554131 + | pyridoxal-5'-phosphate-dependent enzyme, beta subunit TERM 663 1554583 - 1554553 - g 71 -11 -3.31144 | GTTCCAGGGCGAGAA GGGGGCCGAGAGGA GCT TCCGCTGGGCCCTC GAAGCGGAGAAGATC Tpen_1606 1554212 - 1554769 + | rubrerythrin Tpen_1607 1554844 - 1555134 + | hypothetical protein Tpen_1608 1555435 - 1555220 - | hypothetical protein Tpen_1609 1555858 - 1555463 - | PilT domain-containing protein Tpen_1610 1556084 - 1555845 - | AbrB family transcriptional regulator Tpen_1611 1557989 - 1556223 - | AMP-dependent synthetase and ligase TERM 664 1556512 - 1556527 + g 70 -11.8 -2.78715 | opp_overlap 1556508 CCGTCAACCGAGTAG CGGGCG GCGT CGCCCG TGTCGTAGAAACCTT Tpen_1612 1558541 - 1557996 - | hypothetical protein Tpen_1613 1559612 - 1558551 - | hydrogenase expression/formation protein HypE TERM 665 1558905 - 1558883 - G 71 -11.2 -3.29511 | overlap 1558885 CCCACTCGTTCAGAA CACCCGCGAG CCC CCCGCGGGTC GGGTCCCTCGCCGCG TERM 666 1558903 - 1558885 - G 82 -13.8 -3.21593 | overlap 1558883 CACTCGTTCAGAACA CCCGCGAG CCC CCCGCGGG TCGGGTCCCTCGCCG Tpen_1614 1559908 - 1559609 - | hypothetical protein Tpen_1615 1561210 - 1559975 - | hydrogenase formation HypD protein Tpen_1616 1562827 - 1561295 - | carbohydrate kinase, FGGY Tpen_1617 1563711 - 1562836 - | binding-protein-dependent transport systems inner membrane component Tpen_1618 1564565 - 1563714 - | binding-protein-dependent transport systems inner membrane component Tpen_1619 1565947 - 1564595 - | extracellular solute-binding protein Tpen_1620 1566900 - 1566007 - | dihydrodipicolinate synthetase Tpen_1621 1566992 - 1567678 + | bacterio-opsin activator Tpen_1622 1567675 - 1569174 + | carbohydrate kinase, FGGY Tpen_1623 1570187 - 1569171 - | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding Tpen_1624 1570325 - 1571086 + | 2-dehydro-3-deoxyglucarate aldolase Tpen_1625 1571875 - 1571144 - | hypothetical protein Tpen_1626 1571962 - 1572294 + | hypothetical protein Tpen_1627 1572386 - 1573000 + | hypothetical protein TERM 667 1572995 - 1573016 + F 81 -7.3 -4.62471 | gap 1, overlap 1572995 1572996 GGCTCGGGCACCCCC G-GCTAGCCC TGC GGGTTAGCGC TTTTTCGAAGTTAAG Tpen_1628 1573072 - 1576170 + | glycoside hydrolase family protein TERM 668 1576182 - 1576161 - T 72 -8.7 -3.8046 | GGTAAAAACGGTAAA GCTCAGGTA GGGC TACCTGTGC GCGCGGGCAACGTAG Tpen_1629 1576514 - 1576173 - | hypothetical protein Tpen_1630 1577095 - 1576550 - | hypothetical protein Tpen_1631 1579073 - 1577130 - | formate dehydrogenase Tpen_1632 1579967 - 1579113 - | 4-vinyl reductase, 4VR Tpen_1633 1580087 - 1580800 + | SPP-like hydrolase Tpen_1634 1581794 - 1580790 - | oligopeptide/dipeptide ABC transporter, ATPase subunit Tpen_1635 1582719 - 1581772 - | oligopeptide/dipeptide ABC transporter, ATPase subunit Tpen_1636 1583597 - 1582716 - | binding-protein-dependent transport systems inner membrane component Tpen_1637 1584619 - 1583594 - | binding-protein-dependent transport systems inner membrane component TERM 669 1584281 - 1584259 - G 71 -12.6 -2.62263 | opp_overlap 1584280 ACCTCGCCGAGAGGA GGCCCAGGGC GAT GCCCAGAGCC GCGGCGATCAGCGTG Tpen_1638 1586226 - 1584637 - | extracellular solute-binding protein Tpen_1639 1587633 - 1586461 - | major facilitator transporter Tpen_1640 1587755 - 1589266 + | amino acid permease-associated region TERM 670 1589296 - 1589308 + T 75 -4.7 -4.84363 | overlap 1589289 1589297 TCGGCGAGGACCGGG AGGGC TCG GCCCG TTTTTCCTCCTTTCA Tpen_1641 1590737 - 1589277 - | major facilitator transporter Tpen_1642 1590817 - 1591428 + | multiple antibiotic resistance (MarC)-related proteins Tpen_1643 1591407 - 1591652 + | hypothetical protein TERM 671 1591690 - 1591678 - f 71 -9.1 -3.56092 | opp_overlap 1591670 1591673 1591678 CTAGTAGCGGCGAAA GCGGA GCT TCCGC TGTAGTTGTCCGCCC Tpen_1644 1591797 - 1592540 + | GCN5-related N-acetyltransferase TERM 672 1592528 - 1592555 + T 76 -4.1 -4.99312 | gap 1 CCTCCTAGAGAAGGA GCTCGCCGAGTA AAAGG TGC-CGGCTAGC TTTTCTTCTTCTCTT Tpen_1645 1593420 - 1592551 - | Sec-independent periplasmic protein translocase Tpen_1646 1594689 - 1593508 - | hypothetical protein Tpen_1647 1596270 - 1594696 - | carbohydrate kinase, YjeF related protein Tpen_1648 1596378 - 1597196 + | fructose-bisphosphate aldolase Tpen_1649 1597203 - 1598129 + | ribokinase-like domain-containing protein TERM 673 1599028 - 1599044 + G 73 -10.9 -3.46068 | overlap 1599026 AGGCTACCTCTTCGG CTCTCTC GTA GAGAGAG TGTTTGGCTTCAGGC Tpen_1650 1598192 - 1599064 + | hypothetical protein Tpen_1651 1599073 - 1599489 + | hypothetical protein Tpen_1652 1599986 - 1599471 - | nitroreductase Tpen_1653 1600073 - 1601239 + | major facilitator transporter TERM 674 1602076 - 1602107 + G 70 -12.2 -2.78935 | opp_overlap 1602037, overlap 1602062 GGCGCTCCTGAACGC GGACGGCTTCGCGG CGGC CTGCGAGGCTGACC TCTACTCGGCGCTCT Tpen_1654 1601324 - 1602565 + | hypothetical protein TERM 675 1602997 - 1602963 - g 72 -9.2 -3.6968 | GGAGAAGGGTAAGAA GGAGGTTCTAGAGCTC GAG GAGCGCTAGGAGCCCC GCTACGCGGGCTACC Tpen_1655 1602700 - 1602990 + | hypothetical protein Tpen_1656 1603466 - 1603008 - | NUDIX hydrolase TERM 676 1603402 - 1603419 + g 75 -5.5 -4.56597 | opp_overlap 1603403, overlap 1603382 1603403 TTCCCGCGCTTAACG AGGAGGA ACTT TCCTCCC TTTTTAACCACGCAA TERM 677 1603512 - 1603529 + H 88 -8.5 -4.62069 | opp_overlap 1603512 GTTGCTTCTGGAAAA GCCTTAA AAGG TTAAGGC TTTTTACACTACGCG TERM 678 1603529 - 1603512 - H 77 -8.5 -4.07568 | opp_overlap 1603512 GTTGCTTCTGGAAAA GCCTTAA AAGG TTAAGGC TTTTTACACTACGCG Tpen_1657 1603547 - 1604209 + | hypothetical protein Tpen_1658 1604310 - 1605644 + | rhomboid family protein Tpen_1659 1605657 - 1606823 + | tyrosyl-tRNA synthetase Tpen_1660 1606886 - 1608049 + | myo-inositol-1-phosphate synthase Tpen_1661 1609646 - 1608039 - | hypothetical protein TERM 679 1608600 - 1608627 + g 73 -11.2 -3.452 | opp_overlap 1608585, overlap 1608589 CCTCCAGCCGGAGCA CCCCCACTCCAG CAGG CTGGAGACGGGG TTCTCGATGTTTACG TERM 680 1608721 - 1608747 + g 74 -8.1 -4.11216 | gap 1, overlap 1608715 1608724 GCGACTAGCCTCGAG GAAGC-CGGGAA AGCC TTCCTGAGCTTC TTTTCGAGGTAGAGG TERM 681 1608914 - 1608930 + g 74 -10.9 -3.59738 | GGTTAGCCACACCCT CGTCTAC GCC GTAGACG TTTACAGCTATCCTC Tpen_1662 1609756 - 1610436 + | hypothetical protein TERM 682 1610557 - 1610528 - g 78 -8.4 -4.14739 | opp_overlap 1610529, overlap 1610530 CGATGGAGCTTAAAA CAGGGGCGCCCG TATTCC CGGGCTACCCCG TCCCCATCGTCCACA TERM 683 1610556 - 1610530 - g 72 -9.4 -3.67188 | gap 1, opp_overlap 1610529, overlap 1610528 ATGGAGCTTAAAACA GGGGC-GCCCG TATTCC CGGGCTACCCC GTCCCCATCGTCCAC Tpen_1663 1610467 - 1611129 + | cyclase family protein Tpen_1664 1611141 - 1612352 + | aminotransferase, class I and II Tpen_1665 1612325 - 1612876 + | hypothetical protein Tpen_1666 1612873 - 1613778 + | dihydrodipicolinate synthase Tpen_1667 1614794 - 1613787 - | AIR synthase-like protein Tpen_1668 1615287 - 1614781 - | hypothetical protein Tpen_1669 1615783 - 1615274 - | magnesium-dependent phosphatase-1 Tpen_1670 1615895 - 1616863 + | aldo/keto reductase Tpen_1671 1618029 - 1616911 - | hypothetical protein TERM 684 1618000 - 1617976 - G 79 -5.7 -4.86773 | opp_overlap 1617975 1617977, overlap 1617977 TAAAATCAGTAAAAA TGCTAGGAGTA AGC TACTCATAGCT CTTGCATTTTGCAGA Tpen_1672 1618086 - 1620008 + | glycoside hydrolase family 42 protein Tpen_1673 1620484 - 1620005 - | hypothetical protein Tpen_1674 1620715 - 1620494 - | hypothetical protein Tpen_1675 1622258 - 1620717 - | glycoside hydrolase family protein Tpen_1676 1622391 - 1624301 + | extracellular solute-binding protein Tpen_1677 1624336 - 1625379 + | binding-protein-dependent transport systems inner membrane component TERM 685 1625472 - 1625456 - g 75 -8.7 -4.00348 | opp_overlap 1625456 TTTTAAGGAAGCAAA GAGTACG CTT CGCACTC TTCTGGGTACTGTTC Tpen_1678 1625389 - 1626258 + | binding-protein-dependent transport systems inner membrane component TERM 686 1626528 - 1626514 - g 90 -6.4 -5.28831 | AGGAAGAAAAGAAAA GTGTAC TCG GCACAC GCCTAACGATTATTC Tpen_1679 1626261 - 1627223 + | oligopeptide/dipeptide ABC transporter, ATPase subunit Tpen_1680 1627223 - 1628197 + | oligopeptide/dipeptide ABC transporter, ATPase subunit TERM 687 1628524 - 1628566 + G 100 -18.5 -3.70902 | gap 1 CGCTTAACCCTGGTT CCCTGCTCCCGGTACGCCGT CGCG GTGGCGGA-CGGGAGCAGGG TTTCGGTCTGGAAGC Tpen_1681 1628407 - 1629384 + | glycoside hydrolase family protein TERM 688 1629394 - 1629406 + T 70 -6.2 -4.27316 | opp_overlap 1629393 1629394 GGTTGAAGGAAAGAC CCGG CTCAC CCGG TTTTCCCTTCCCCGG Tpen_1682 1631045 - 1629399 - | HEPN domain-containing protein TERM 689 1630029 - 1630078 + g 78 -9.2 -4.07687 | gap 2, opp_overlap 1630011, overlap 1630023 CACGGTGGTTAGCGG GCCCGCGGCTATTGCTGGCGCGGC TACC GCCGTGCATGC-GTAGCAG-GGGC TTTTCCCGAACACGT Tpen_1683 1632420 - 1631173 - | major facilitator transporter TERM 690 1631543 - 1631595 + g 71 -12 -2.89683 | gap 2, overlap 1631585 1631586 ATGTAGGCGGCGAGG ACGGGCTTCCTGCCGGCGACCTCTAC GAG GTAG-GCTC-CCGACAGGTAGCCCGG TATCTGGGCTAGCGT TERM 691 1632748 - 1632734 - g 85 -11.4 -3.96624 | opp_overlap 1632730 TACGGGCACGAGAAA GCCGAG AGC CTCGGC ACGCTGTTCGTCGCT Tpen_1684 1632509 - 1633861 + | cation diffusion facilitator family transporter Tpen_1685 1634106 - 1635266 + | hypothetical protein Tpen_1686 1635943 - 1635578 - | DNA polymerase beta subunit Tpen_1687 1636350 - 1635940 - | HEPN domain-containing protein TERM 692 1636431 - 1636419 - H 91 -3.3 -5.60689 | GGACAGAAGAAAAAA GCGGA AAC TACGC TACACTTATTAGGCT Tpen_1688 1636511 - 1636927 + | HEPN domain-containing protein Tpen_1689 1636911 - 1637279 + | DNA polymerase beta subunit Tpen_1690 1637469 - 1637858 + | HEPN domain-containing protein Tpen_1691 1637855 - 1638247 + | DNA polymerase beta subunit Tpen_1692 1638780 - 1638361 - | DNA polymerase beta subunit Tpen_1693 1639048 - 1638770 - | hypothetical protein Tpen_1694 1639646 - 1639203 - | PilT domain-containing protein Tpen_1695 1639893 - 1639621 - | hypothetical protein Tpen_1696 1640521 - 1640033 - | PaREP8 domain-containing protein Tpen_1697 1640862 - 1640584 - | DNA polymerase beta subunit TERM 693 1640875 - 1640906 + r 75 -11.4 -2.90714 | opp_overlap 1640867 1640868 1640869, overlap 1640892 CACAAAATCCCTCAG GGCCCCCGCAACCC TAGG GGGTAGCGAGAGCC TCTCTAACCCTTTCA Tpen_1698 1641289 - 1640888 - | HEPN domain-containing protein Tpen_1699 1641971 - 1641504 - | hypothetical protein Tpen_1700 1642569 - 1642078 - | PaREP8 domain-containing protein Tpen_1701 1642956 - 1643210 + | hypothetical protein Tpen_1702 1643711 - 1643313 - | hypothetical protein Tpen_1703 1645086 - 1643713 - | hypothetical protein Tpen_1704 1645243 - 1645608 + | hypothetical protein Tpen_1705 1645719 - 1646534 + | hypothetical protein Tpen_1706 1646917 - 1646582 - | hypothetical protein TERM 694 1647002 - 1646990 - R 78 -10.5 -3.44146 | overlap 1646986 GCTTTTTACAATCAA CGCGG GCG CCGCG ACCAAGCACCCTCGG Tpen_1707 1647411 - 1647109 - | hypothetical protein Tpen_1708 1647452 - 1647757 + | transcriptional regulator/antitoxin, MazE Tpen_1709 1647765 - 1648214 + | hypothetical protein Tpen_1710 1648256 - 1648474 + | hypothetical protein Tpen_1711 1648631 - 1648996 + | hypothetical protein Tpen_1712 1649707 - 1649135 - | dTDP-4-dehydrorhamnose 3,5-epimerase Tpen_1713 1649993 - 1649709 - | hypothetical protein Tpen_1714 1653920 - 1650039 - | peptidase S8 and S53, subtilisin, kexin, sedolisin TERM 695 1652359 - 1652327 - G 77 -8.3 -4.30576 | overlap 1652329 CCTGCACTATCAAAA TACCGGGGTACCTCG GGT CGAGGAAGCCTGGCA TAGAGAGACCCGCAA TERM 696 1653868 - 1653888 + g 72 -5.5 -4.47328 | opp_overlap 1653857 AACAGCAACACTGCC GCTAGTA CAACTGC TACTAGC TTTTGTCCTGCGATT Tpen_1715 1654197 - 1655285 + | UDP-N-acetylglucosamine 2-epimerase Tpen_1716 1656095 - 1655271 - | FkbM family methyltransferase Tpen_1717 1657380 - 1656100 - | glycosyl transferase, group 1 Tpen_1718 1659883 - 1657793 - | glycosyl transferase family protein Tpen_1719 1661316 - 1659973 - | UDP-glucose 6-dehydrogenase TERM 697 1660431 - 1660470 + g 72 -5.1 -4.63486 | gap 2, opp_overlap 1660440 1660441, overlap 1660440 TAACCTCGAGAATCG CT-TCGAGAAGCTT-GGCG TCAA CGCCTAGGCTTTTCGCCAG TTTTATTAACGCCCT Tpen_1720 1662199 - 1661309 - | nucleotidyl transferase TERM 698 1661820 - 1661864 + g 81 -10.9 -3.87373 | gap 3, opp_overlap 1661798 1661816 GCCCCCACGAAGGGC TCAGCCCTGAGCACGGCGTCGC CAAA GCCACGC-G-GCTCAGG-CTGA TTTATAAAAAATATC Tpen_1721 1663984 - 1662776 - | glycosyl transferase, group 1 Tpen_1722 1665331 - 1664147 - | glycosyl transferase, group 1 TERM 699 1665352 - 1665365 + r 78 -5.3 -4.82548 | TTGCACCTTATAGAT TGCTT CGTG AAGCA TTTTCTCTATTTTTC Tpen_1723 1666470 - 1665328 - | glycosyl transferase, group 1 TERM 700 1665841 - 1665852 + g 72 -5.8 -4.45168 | AATAATTCGCAGTAG GGTG TCTA CACC TTTATCTTTTAAGAG Tpen_1724 1667618 - 1666467 - | glycosyl transferase, group 1 Tpen_1725 1668675 - 1667611 - | glycosyl transferase, group 1 Tpen_1726 1669499 - 1668711 - | nucleotidyl transferase Tpen_1727 1670524 - 1669535 - | glycosyl transferase family protein TERM 701 1670579 - 1670621 + r 79 -12.7 -3.07344 | gap 1 GATGTAGTACTAGCT GGGGCCC-CGCCTTCGAA AGCTCTTC TGCGACGGCGAGGGCCCC TATCTTCAGGGCTAG Tpen_1728 1672402 - 1670963 - | hypothetical protein Tpen_1729 1674325 - 1672406 - | hypothetical protein TERM 702 1672628 - 1672639 + g 71 -7.2 -4.18197 | TGCTACTACGAGTAT CCCG GTTG CGGG TTTTCCGTCGGGGGT Tpen_1730 1675610 - 1674348 - | glycosyl transferase family protein Tpen_1731 1676939 - 1675728 - | Fis family transcriptional regulator TERM 703 1676423 - 1676440 + g 74 -8.3 -4.13945 | opp_overlap 1676408 1676405 GGCGTACTTCCAGCT CGCCCGG CCTG CCGAGCG TTTTCGCCTCCCCGT Tpen_1732 1677335 - 1677060 - | hypothetical protein Tpen_1733 1677700 - 1677407 - | hypothetical protein Tpen_1734 1678038 - 1677754 - | hypothetical protein Tpen_1735 1678350 - 1678078 - | hypothetical protein TERM 704 1678564 - 1678542 - R 88 -2.1 -5.46657 | TAGTCGAAGAAAAAA TTAATAAAG CTTTT CTTTTTTAA AGCACTCTCGGGCAG TERM 705 1678579 - 1678591 + r 81 -4.9 -5.06414 | AAGCACTCTCGGGCA GAATA TTT TATTC TTTTTATTGCCCGAA TERM 706 1678718 - 1678736 + r 95 -12.4 -4.25566 | TAGGACTCTTAACCC GCGCGCGA GAT TTGCGCGC TTTTGGCTCATTGTT Tpen_1736 1679568 - 1678753 - | hypothetical protein Tpen_1737 1680331 - 1679558 - | hypothetical protein TERM 707 1679834 - 1679846 + g 72 -4.8 -4.61873 | overlap 1679824 CAGCTCGGCGCGGAC GACG AGCGC CGTC TTTTCCTTTATAACG Tpen_1738 1682131 - 1680587 - | polysaccharide biosynthesis protein TERM 708 1680820 - 1680849 + g 71 -12.8 -2.56449 | gap 1, opp_overlap 1680805, overlap 1680819 1680826 GCGCTAGGGGGGCTA GCGGGGCGAGCGC GGCTA GCGC-CGCCGCGC ATGTTCTGGTAGCGT TERM 709 1681295 - 1681253 - G 88 -14 -3.65046 | GGCGTAGCGGAAGAA CCTCCCGGAGTCATCGCCGC TGA GCCTCGAGAACGCCGGGAGG AGGGAGAGGGAGATG Tpen_1739 1682249 - 1682863 + | cobalamin (vitamin B12) biosynthesis CbiM protein Tpen_1740 1682871 - 1683173 + | cobalamin biosynthesis protein TERM 710 1683459 - 1683489 + G 73 -12.4 -3.17051 | overlap 1683449 1683459 CTGGTCGCGCTCCCC GCGTTGCTCCGCGG GGA CCCCGGGGCGCCGC TCTTCGTCCTGAGGG Tpen_1741 1683180 - 1683908 + | cobalt transport protein Tpen_1742 1683908 - 1684627 + | ABC transporter related Tpen_1743 1686036 - 1684774 - | glycosyl transferase, group 1 Tpen_1744 1687071 - 1686040 - | glycosyl transferase, group 1 TERM 711 1686922 - 1686970 + g 73 -13 -2.78384 | gap 1, opp_overlap 1686912 GAGTAGGTCCCGGTG CCCCGGTACCGGGAGGCGGG-GG ACTA CCATCTGCCTCGCGGAGACGGGG TATCGTGCGAACGCC Tpen_1745 1687146 - 1688207 + | glycosyl transferase family protein Tpen_1746 1688577 - 1689617 + | glycosyl transferase, group 1 TERM 712 1689715 - 1689738 + F 78 -5.2 -4.87786 | gap 1, overlap 1689691 1689716 1689719 TGTTCGCCCGTAGCT GCCTCTCGTGC GCC GCGCGAG-GTC TTTTTATAGCCTTGG TERM 713 1689716 - 1689736 + F 77 -8.9 -4.05669 | overlap 1689691 1689715 1689719 GTTCGCCCGTAGCTG CCTCTCGTG CGC CGCGCGAGG TCTTTTTATAGCCTT Tpen_1747 1689769 - 1690104 + | hypothetical protein Tpen_1748 1690957 - 1690088 - | hypothetical protein Tpen_1749 1690995 - 1691819 + | hypothetical protein Tpen_1750 1691860 - 1692921 + | ATPase Tpen_1751 1692918 - 1693826 + | ABC transporter related TERM 714 1693958 - 1693974 + GTF 95 -11.5 -4.3534 | overlap 1693959 CGTCCAGCAGGGGCC TGGCGGG AGG CCCGCCG TTTTCCTACTTCCCC TERM 715 1693959 - 1693973 + GTF 81 -12.8 -3.20722 | overlap 1693958 GTCCAGCAGGGGCCT GGCGGG AGG CCCGCC GTTTTCCTACTTCCC Tpen_1752 1693801 - 1694553 + | hypothetical protein Tpen_1754 1696393 - 1695410 - | von Willebrand factor, type A Tpen_1753 1694557 - 1695462 + | hypothetical protein Tpen_1755 1697320 - 1696403 - | von Willebrand factor, type A Tpen_1756 1698197 - 1697331 - | hypothetical protein Tpen_1757 1698339 - 1699256 + | hypothetical protein Tpen_1758 1699605 - 1699324 - | hypothetical protein TERM 716 1699619 - 1699642 + r 72 -6.6 -4.25104 | overlap 1699615 1699616 ATTCCTCTCCCCGGG CGCTAGCCCC CTTC GTGGCTATCG TTTTCCTCGAGGCAG Tpen_1759 1700163 - 1699621 - | hypothetical protein Tpen_1760 1701304 - 1700333 - | radical SAM domain-containing protein Tpen_1761 1702725 - 1701319 - | hypothetical protein Tpen_1762 1704080 - 1702725 - | type III restriction enzyme, res subunit Tpen_1763 1704498 - 1704148 - | hypothetical protein Tpen_1764 1704839 - 1705111 + | hypothetical protein TERM 717 1705314 - 1705334 + G 84 -12.5 -3.75506 | TTGTAGGTGTATCGT CGCCGAGGC CTA GCCTCGGGG TTCTTAGTAGCTTGT Tpen_1765 1705208 - 1706284 + | glyceraldehyde-3-phosphate dehydrogenase Tpen_1766 1706414 - 1707409 + | putative glutamate synthase subunit beta TERM 718 1707412 - 1707424 + T 77 -3.3 -5.14965 | opp_overlap 1707409, overlap 1707410 AACCGGGAAGTAGCG CGCGT AGC ACGGG TTTTTTACTCCGGCT Tpen_1767 1709163 - 1707688 - | polysaccharide biosynthesis protein Tpen_1768 1709703 - 1709176 - | NUDIX hydrolase Tpen_1769 1709789 - 1709989 + | hypothetical protein Tpen_1770 1710874 - 1710170 - | short-chain dehydrogenase/reductase SDR Tpen_1771 1714345 - 1711010 - | hypothetical protein Tpen_1772 1715504 - 1714395 - | THUMP domain-containing protein Tpen_1773 1716024 - 1715551 - | hypothetical protein Tpen_1774 1717783 - 1716017 - | hypothetical protein TERM 719 1717374 - 1717399 + g 71 -6.8 -4.18197 | TGCGCCACGCAGTAG CCGCTGGAGC AGTTGA GCTTAAGCGG TTTTCCGTCGGCGCT Tpen_1775 1718824 - 1717928 - | ABC transporter related TERM 720 1717985 - 1718007 + g 82 -10.6 -4.17023 | opp_overlap 1717996, overlap 1718001 1718003 GAGGGACTTCAACTC TCCTTCCAGA ACC TCTGGGGGGA TTTTCCCCTGCTTGG TERM 721 1718022 - 1718045 + g 70 -3.8 -4.64861 | gap 1 ATTTTCCCCTGCTTG GCT-GCGGCCT CCA AGGCTTCCAGC TTTATTTTCAGCAGG Tpen_1776 1719968 - 1718817 - | hypothetical protein Tpen_1777 1720042 - 1720617 + | methyltransferase type 11 Tpen_1778 1722164 - 1720614 - | glycosyl transferase, group 1 Tpen_1779 1722232 - 1723008 + | zinc/iron permease Tpen_1780 1723050 - 1723562 + | hypothetical protein Tpen_1781 1723632 - 1724858 + | hypothetical protein Tpen_1782 1724846 - 1725691 + | radical SAM domain-containing protein Tpen_1783 1726413 - 1725703 - | hypothetical protein Tpen_1784 1726460 - 1726882 + | zinc finger SWIM domain-containing protein Tpen_1785 1727715 - 1726888 - | hypothetical protein TERM 722 1728083 - 1728108 + G 71 -8.3 -4.08216 | gap 1, overlap 1728086 AGACTGTGGACTACG TTAGGAGCCTGG ACG CC-GGCTCCTGG TTTTCCGGGAGGTAC TERM 723 1728559 - 1728598 + G 78 -4.2 -5.00616 | gap 1, overlap 1728562 CCGGGCGCTATTGTT GAGTGCTTGAGGGCGCGGG GTC TCCACGCCTAAAAGCA-TC TTTTTTAGCCCGGAA TERM 724 1728562 - 1728596 + G 71 -7 -4.13561 | overlap 1728559 GGCGCTATTGTTGAG TGCTTGAGGGCGCGGG GTC TCCACGCCTAAAAGCA TCTTTTTTAGCCCGG Tpen_1786 1727926 - 1728591 + | glycerophosphoryl diester phosphodiesterase Tpen_1787 1728632 - 1730518 + | peptidase S16, lon domain-containing protein Tpen_1788 1731623 - 1730535 - | hypothetical protein Tpen_1789 1732571 - 1731750 - | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Tpen_1790 1733263 - 1732574 - | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Tpen_1791 1733318 - 1733869 + | methylpurine-DNA glycosylase (MPG) Tpen_1792 1734234 - 1733953 - | hypothetical protein TERM 725 1734729 - 1734749 + G 81 -12.5 -3.53012 | TCGTTCTGCTAGGTC CCCCTGAGG ACC CCGCAGGGG TTTCCGGCGCGGGAA Tpen_1793 1734341 - 1735297 + | ABC-type tungstate transport system permease component-like Tpen_1794 1735337 - 1735993 + | binding-protein-dependent transport systems inner membrane component Tpen_1795 1735977 - 1736681 + | ABC transporter related TERM 726 1737763 - 1737741 - g 77 -10.5 -3.86015 | overlap 1737728 1737742 GAGTTCGCGGAGAAA GCCGCGAGC GTCGG GCTCGCGGT AGACGAGGAAACAGG TERM 727 1737762 - 1737742 - g 77 -14 -2.91395 | overlap 1737728 1737741 AGTTCGCGGAGAAAG CCGCGAGC GTCGG GCTCGCGG TAGACGAGGAAACAG Tpen_1796 1736928 - 1737797 + | molybdate-binding domain-containing protein Tpen_1797 1737838 - 1738359 + | transporter Tpen_1798 1738420 - 1739079 + | hypothetical protein Tpen_1799 1739409 - 1740155 + | hypothetical protein Tpen_1800 1740167 - 1741576 + | ATP-dependent protease La Tpen_1801 1741989 - 1741585 - | hypothetical protein TERM 728 1741696 - 1741707 + g 70 -3.6 -4.57073 | overlap 1741682 CCCGGCTAGCCCCAC GGGC TTCG GCTC TTTTTGAAGCGCCTC Tpen_1802 1743161 - 1741983 - | FAD-dependent pyridine nucleotide-disulphide oxidoreductase TERM 729 1742689 - 1742673 - G 77 -10.8 -3.84406 | opp_overlap 1742686 1742686 CTCCCAGGACAAGAA GGCCGC CTTGT GCGGCC CCGGAGGGCACTTGT Tpen_1803 1743422 - 1743186 - | hypothetical protein TERM 730 1743242 - 1743258 + g 81 -12.3 -3.7282 | TCCCGTCTACCTTGG CGAGCTC GAC GAGCTCG TTCTTGGTGCGCTCC Tpen_1804 1743839 - 1743432 - | hypothetical protein TERM 731 1743977 - 1743946 - R 70 -5 -4.53705 | opp_overlap 1743966 1743968, overlap 1743965 1743966 AAGGTGGACAGAAAA CCCGGAAAACTCAG AAAA CGGTGCCTTCCAGG CTCTTCTTGTAGCGT Tpen_1805 1744705 - 1743956 - | creatininase Tpen_1806 1745816 - 1744746 - | ABC transporter related Tpen_1807 1748027 - 1745829 - | binding-protein-dependent transport systems inner membrane component TERM 732 1746614 - 1746602 - G 81 -9.1 -4.31692 | overlap 1746593 AAGCTAGGAGGAAAA CCCCA ATC TGGGG GAAGACAGTTACCAG Tpen_1808 1749692 - 1748148 - | extracellular solute-binding protein Tpen_1809 1750957 - 1749767 - | hypothetical protein Tpen_1810 1753125 - 1751005 - | metallophosphoesterase Tpen_1811 1753764 - 1753156 - | hypothetical protein TERM 733 1753223 - 1753201 - G 72 -6.2 -4.35524 | overlap 1753202 CCTTGAAACTGAAAA CGCTAGACCC TCG GGGTCTACCC ATACGGGGTACACGC Tpen_1812 1755635 - 1753782 - | DEAD_2 domain-containing protein TERM 734 1754166 - 1754184 + g 75 -5.9 -4.6902 | GGCCAGGAGGAGCCC CCTCCCC TCCGC GGCGAGG TTTTTGAACTTCTCG Tpen_1813 1755730 - 1756830 + | Sua5/YciO/YrdC/YwlC family protein Tpen_1814 1757480 - 1756827 - | phosphoribosyltransferase Tpen_1815 1758762 - 1757635 - | signal-transduction protein TERM 735 1758613 - 1758601 - G 74 -6.3 -4.4267 | CCTCAAAAGCGAAAA GATAG ACA CTATC CCCGCGTACCTCCCC TERM 736 1758747 - 1758732 - G 80 -10.4 -4.08216 | CTATCTTCGTGAAAA CCCCCT GGGA AGGGGG CCCAGTAAAGCTCAT Tpen_1816 1758922 - 1759317 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein TERM 737 1759459 - 1759443 - g 73 -12.3 -3.14132 | CGGCGTCGCCACGAA GCTCCTC GAG GAGGAGC TCCCCAGGAACGTTG Tpen_1817 1759324 - 1761111 + | aldehyde ferredoxin oxidoreductase Tpen_1818 1761795 - 1761091 - | sugar fermentation stimulation protein A TERM 738 1761145 - 1761184 + g 77 -2.1 -5.09204 | overlap 1761146 1761146 1761148 TATTTCTGACTGGGA CGG-GTCGTAGTGGAGGGC GACA GCTCTCAGC-ACGACTCCC TTTTTCTTAGCCTCT Tpen_1819 1762754 - 1761792 - | methionine synthase, vitamin-B12 independent Tpen_1820 1763501 - 1762761 - | molybdopterin-guanine dinucleotide biosynthesis protein B TERM 739 1763614 - 1763637 + G 71 -11 -3.29511 | overlap 1763617 GATAGACCTCTCCGG GAAGCTGTCG CTAA CGACCGCTTC TTCTAGGGGCATAGG Tpen_1821 1763588 - 1764382 + | short chain dehydrogenase Tpen_1822 1764406 - 1765176 + | UBA/THIF-type NAD/FAD binding protein Tpen_1823 1766359 - 1765169 - | major facilitator transporter TERM 740 1765958 - 1765970 + g 79 -5.5 -4.84359 | GGCAAGCCCTGTGAG CGTTG CTC CGACG TTTTTCTCGGCGTAC Tpen_1824 1767839 - 1766430 - | dihydrolipoamide dehydrogenase TERM 741 1767623 - 1767645 + g 72 -9.1 -3.88291 | CCGCCAGGCTTACCT GGATGCCGA ACTTC TCGGCTTCC TTTATGCGCCTAATG TERM 742 1767744 - 1767757 + g 73 -3.1 -4.72386 | gap 1 GTTGTTCTCTATTAC GGC-GA ACC TCAGCC TTTTTCCCTCGTTTA Tpen_1825 1767899 - 1768822 + | signal peptide peptidase SppA, 36K type Tpen_1826 1770225 - 1768783 - | cell wall biosynthesis glycosyltransferase-like protein TERM 743 1769398 - 1769380 - G 72 -8.8 -3.88291 | overlap 1769394 GAGTACGCGTAGAAA CGACCTCC TAA GGACGTCG CTCGTGCCGTACGAC Tpen_1827 1770886 - 1770227 - | hypothetical protein Tpen_1828 1772217 - 1770889 - | hypothetical protein TERM 744 1771734 - 1771748 + g 71 -12.8 -2.64616 | opp_overlap 1771734 GAGGCGCCGGTAGAA CCGCGG AGA CCGCGG TCATGTAGATGGCGC TERM 745 1771748 - 1771734 - G 79 -12.8 -3.28924 | opp_overlap 1771734 GAGGCGCCGGTAGAA CCGCGG AGA CCGCGG TCATGTAGATGGCGC Tpen_1829 1773131 - 1772232 - | nucleotidyl transferase TERM 746 1773560 - 1773545 - g 72 -4.6 -4.67982 | TGGTACTGAAGAAAA GCGGAG TGAT CTACGC GTTGGAGTACTGCAA Tpen_1830 1773244 - 1773621 + | desulfoferrodoxin, ferrous iron-binding region Tpen_1831 1773655 - 1774947 + | major facilitator transporter Tpen_1832 1774948 - 1775844 + | hypothetical protein Tpen_1833 1776821 - 1775850 - | asparagine synthetase A TERM 747 1776791 - 1776808 + g 76 -7 -4.4767 | GCTTTACGCCGTAGT CCCTCA ACAAAG TGAGGG TTTTCTGCTCCATGG Tpen_1834 1777392 - 1776973 - | hypothetical protein Tpen_1835 1778130 - 1777393 - | hypothetical protein Tpen_1836 1779180 - 1778173 - | hypothetical protein Tpen_1837 1779300 - 1780370 + | mandelate racemase/muconate lactonizing protein Tpen_1838 1780415 - 1780915 + | hypothetical protein Tpen_1839 1780953 - 1781807 + | pyrroline-5-carboxylate reductase