TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.357687 %AT, 2536693 nt, 23375 terms. Intergenic: 0.353623 %AT, H2T: 338088 nt, 1896 terms; T2T: 88544 nt, 1351 terms; H2H: 154533 nt, 1464 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|221632037|ref|NC_011959.1| Thermomicrobium roseum DSM 5159, complete genome (length 2003006) TERM 1 719 - 752 + G 74 -10.1 -3.78329 | overlap 724 GTTGGCGAACCGGCT CGCGCGCGAGACTCG GGGA CGGATCGCGCTCGCG TTTCGCTTGGTCAGC trd_0002 102 - 1154 + | DNA polymerase III tau and gamma subunits trd_0004 1145 - 1801 + | hypothetical protein trd_0003 4120 - 1796 - | hypothetical protein TERM 2 2956 - 2918 - G 76 -14.4 -3.07113 | overlap 2942 GATGAGTCCAGTCAA GCGGCTCGCCGGCAGGCG AGG CAACTGCCGGCGCACCGG CGTGAAGTCAGGCAA trd_0005 6422 - 4299 - | Tetratricopeptide repeat family TERM 3 6007 - 6032 + g 74 -11.1 -3.63515 | gap 1, opp_overlap 5973 TGGCCAGTCGCGTTG GCGATGCG-GCG CGC CGCTCGCAGCGC TTCTTGCAGATGGAG trd_0006 7444 - 6419 - | threonine ammonia-lyase, biosynthetic trd_0007 7397 - 7546 + | hypothetical protein trd_0008 7795 - 7673 - | hypothetical protein trd_0009 11175 - 8491 - | hypothetical protein pyrF 11231 - 12076 + | orotidine 5'-phosphate decarboxylase trd_0011 12651 - 12112 - | protease I trd_0012 13541 - 12729 - | hypothetical protein trd_0013 14467 - 13541 - | probable transport ATP-binding protein trd_0014 15312 - 14659 - | tRNA guanosine-2'-O-methyltransferase trd_0015 15375 - 15758 + | hypothetical protein TERM 4 16567 - 16594 + F 89 -18.6 -3.03124 | opp_overlap 16571 16582, overlap 16571 GACGCCGCGTCCGAG GGAACGGGAACA CCAG TGTTCCCGTTCC TCTTCGAAACTGGAA TERM 5 16571 - 16590 + F 73 -12.2 -3.36452 | opp_overlap 16571 16582, overlap 16567 CCGCGTCCGAGGGAA CGGGAACA CCAG TGTTCCCG TTCCTCTTCGAAACT cas6 16735 - 17598 + | CRISPR-associated protein Cas6 trd_0017 17595 - 19292 + | hypothetical protein cst2 19365 - 20432 + | CRISPR-associated regulatory protein, DevR family cas5t 20455 - 21162 + | CRISPR-associated protein Cas5, Tneap subtype TERM 6 22658 - 22639 - g 76 -9.2 -4.09739 | GGAAGCTGCCCAAAA CGGCGAGC GGGT GCTCGTCG TCGCCAATCGGGTGC cas3 21152 - 23473 + | CRISPR-associated helicase Cas3 domain protein cas4 23488 - 24075 + | CRISPR-associated protein Cas4 cas1 24072 - 25061 + | CRISPR-associated protein Cas1 trd_0024 25126 - 25389 + | CRISPR-associated protein Cas2 trd_0023 26456 - 25386 - | hydrogenase expression/formation protein HypE TERM 7 26670 - 26635 - R 74 -2.6 -4.78237 | gap 3, overlap 26636 26637 GATCGGACAAGAAAA GTTTGCTCCCG-GGGGA ACGAG TCCCCACGGGAGCG--C GAGAGGAGGGAGGGT trd_0025 27293 - 26685 - | glutamine amidotransferase subunit pdxT trd_0026 28206 - 27304 - | pyridoxine biosynthesis protein trd_0027 29576 - 28233 - | aminotransferase, class I and II trd_0028 30691 - 29573 - | hypothetical protein trd_0029 30736 - 30855 + | hypothetical protein TERM 8 34241 - 34221 - f 81 -12.5 -3.9122 | GAGGGCTTGAAACAA CGCGCGCTC GAG GAGAGCGCG AGCCTCGTACCCGTT trd_0031 36860 - 38383 + | UDP-N-acetylglucosamine synthesis bifunctional protein TERM 9 38547 - 38531 - g 72 -3.6 -4.63218 | opp_overlap 38531 38532 38535, overlap 38532 CCGCCTGGAAGAAAA TGTCCG CGGCT CGGACG TGTTCGTCATCCAGT trd_0032 38388 - 39326 + | ribose-phosphate pyrophosphokinase TERM 10 40090 - 40109 + G 70 -5.6 -4.24002 | overlap 40102 CGACCGGATCGTGGG GATCGTGC ACGT GCGCGACC TTTTGCGCTTTGCGC trd_0033 39368 - 40630 + | magnesium and cobalt efflux protein corC TERM 11 41144 - 41167 + G 80 -11.8 -3.79519 | gap 1, overlap 41148 GCAGCTGTCCTCGAC CAGCTCGCTCG CGA CGAGCGA-CTG TTTCCTCCTACCGTT trd_0035 40637 - 41188 + | BirA protein trd_0034 42314 - 41175 - | N5,N10-methylenetetrahydromethanopterin reductase-related protein trd_0036 42561 - 42833 + | putative cellulose-binding protein trd_0037 43292 - 42864 - | hypothetical protein trd_0038 43284 - 43439 + | hypothetical protein trd_0039 43718 - 44929 + | acyl-CoA dehydrogenase trd_0040 44931 - 45467 + | hypothetical protein trd_0041 45464 - 46237 + | 3-hydroxybutyryl-CoA dehydratase trd_0042 46271 - 47035 + | electron transfer flavoprotein beta-subunit trd_0043 47054 - 48046 + | electron transfer flavoprotein alpha subunit trd_0044 48043 - 49341 + | putative FAD dependent oxidoreductase trd_0045 49406 - 50275 + | putative CvpA family protein trd_0046 50507 - 50677 + | hypothetical protein TERM 12 50703 - 50738 + T 85 -16.3 -3.08464 | gap 1 TGCCAGTGCGGGCGT TCGCCACGGCGTTTCT GCATG AGGA-CGCCGTGGCGA TTGCGTCCGTAGTAG trd_0047 51187 - 50684 - | putative acetyltransferase trd_0048 57166 - 51341 - | PAS domain S-box protein TERM 13 53312 - 53326 + g 78 -10 -4.03234 | TTCATGCCAGAGCCA GACGGT CCG ACCGTC TTTGTGTAGGAACCG trd_0049 57525 - 58982 + | putative RNA nucleotidyltransferase trd_0050 59015 - 60220 + | hypothetical protein trd_0051 60192 - 60365 + | hypothetical protein TERM 14 60652 - 60614 - f 72 -11.1 -3.51924 | opp_overlap 60627 CTGGTAGTCATAGAA CCGCTGGGCAATACG-GTC GGC GACACGTTCTGCCCA-CGG GGCGAGCCGTTCCAG trd_0052 61007 - 62080 + | tyrosine recombinase xerC trd_0053 62459 - 62193 - | hypothetical protein trd_0054 63603 - 62593 - | hypothetical protein mraZ 63584 - 64012 + | mraZ protein TERM 15 64667 - 64677 + G 72 -8.2 -4.09739 | opp_overlap 64614, overlap 64631 CGAGCGAATCCATCC CGCG ACG CGCG TTTTCCAGGCCTTGC mraW 64032 - 65012 + | S-adenosyl-methyltransferase MraW trd_0057 65002 - 65460 + | hypothetical protein trd_0058 65457 - 67184 + | penicillin-binding protein TERM 16 68218 - 68269 + G 72 -13 -3.07443 | opp_overlap 68245, overlap 68220 CCCGGCTTCCTGTAT GGCGGCGCTCTCGCTCCTG-GCGG AAATTC CCGCGCAGCGGCG-GATCGCCGTC TTCGGTGACATGTAC trd_0059 67181 - 68581 + | probable udp-n-acetylmuramoylalanyl-d-glutamyl-2, 6-diaminopimelate--d-alanyl-d-alanyl ligase protein TERM 17 69247 - 69269 + G 71 -4 -4.57353 | overlap 69248 69252 GTGACGTTCTGCTTC ACCATGGTCG GCG CGATCTTGGG TTTTCTCTGGTACAA mraY 68578 - 69597 + | phospho-N-acetylmuramoyl-pentapeptide-transferase murD 69613 - 71022 + | UDP-N-acetylmuramoylalanine--D-glutamate ligase ftsW 71022 - 72296 + | cell division protein FtsW murC 72293 - 73681 + | UDP-N-acetylmuramate--alanine ligase murB 73659 - 74618 + | UDP-N-acetylenolpyruvoylglucosamine reductase trd_0065 74622 - 75740 + | D-alanine--D-alanine ligase TERM 18 76359 - 76323 - g 72 -13 -3.05384 | gap 1, opp_overlap 76325 TCGGGGGCGAGCGAA TCCTGCTCGGCGATGCC GAGC GGC-TCGCCGAGCAGTT GGCTGTGCTCGATGC TERM 19 76325 - 76357 + G 100 -20 -3.14647 | gap 1, opp_overlap 76323 GGGGGCGAGCGAATC CTGCTCGGCGATGCC GAGC GGC-TCGCCGAGCAG TTGGCTGTGCTCGAT trd_0066 75737 - 76456 + | cell division protein ftsQ homolog trd_0067 76471 - 76608 + | hypothetical protein TERM 20 76997 - 77029 + G 75 -10.6 -3.84451 | gap 1 GCTGGCACGAGAGGC GGGCGCGCTGACCGT CGCG GTGGTCA-CGCGTCC TTTCGATTTCGAGGG ftsZ 76614 - 77729 + | cell division protein FtsZ TERM 21 78005 - 77975 - gf 90 -15.4 -3.61517 | ACTCGCGCTCAAGAA GCGGCCGGTCTCGC CGG ACGAGATCGACCGC ATCGTGGCGACCGTA nrdR 77748 - 78233 + | transcriptional regulator, NrdR family trd_0070 78191 - 79363 + | hypothetical protein TERM 22 79393 - 79358 - T 100 -16.8 -4.36914 | overlap 79360 TTGCTCCGGAGAAAA CGCTGACGCGACCGGA CAAT CCCGGTCGCGTCGGAG GGAAGTGGCTGGTCC TERM 23 79391 - 79360 - T 86 -18 -2.52946 | overlap 79358 GCTCCGGAGAAAACG CTGACGCGACCGGA CAAT CCCGGTCGCGTCGG AGGGAAGTGGCTGGT trx 79736 - 79413 - | thioredoxin TERM 24 80196 - 80221 + G 73 -6 -4.42653 | opp_overlap 80187, overlap 80199 AATGTAGCGGTCGGG GTGGCGCGCC TCGGCC GGCGAGCTGC TTTTCTCGGTCAGGT TERM 25 80351 - 80371 + G 71 -3.9 -4.55093 | overlap 80352 GGCTTTCGTGAGTCT GCGCGCT GACGGCG AGCGCGA TTTCTTGTTCTATCG TERM 26 80653 - 80665 + G 81 -3.3 -5.0133 | TCGTCAAGTTGAGTA GCGAG GAA CTGGC TTTTTTGACCGGGTC trd_0072 80067 - 81029 + | putative fructokinase trd_0073 81053 - 82456 + | aminopeptidase TERM 27 82488 - 82447 - T 83 -14.5 -3.19192 | CGCGACGGAAGGGAA TGTGATCTGACGCAGCACA CCGG CGTGCCGCGTCAGAAAACA GAACGCTGCTGCTCG trd_0074 84128 - 82533 - | Amidohydrolase family trd_0075 84484 - 84822 + | putative arsenic-efflux pump regulatory protein trd_0076 85026 - 85256 + | hypothetical protein trd_0077 85283 - 86776 + | putative FAD dependent oxidoreductase trd_0078 87646 - 86783 - | hypothetical protein trd_0080 87796 - 89814 + | putative integral membrane protein trd_0079 90688 - 89783 - | putative universal stress protein trd_0081 91694 - 90738 - | putative integral membrane export protein TERM 28 91805 - 91747 - R 75 -12.1 -3.53444 | gap 5, opp_overlap 91766 91794 91797, overlap 91750 91752 CGAGTCGGTCTCAAA CGAGACCGAGAGGCGAG-CCA-GACGGATC GACC GACCCGTCGTGGTCTCGCCTCTCGGTC--- TCGCTCGGCCGAGGG TERM 29 91805 - 91750 - R 100 -30.1 -2.90496 | gap 2, opp_overlap 91766 91794 91797, overlap 91747 91752 GTCGGTCTCAAACGA GACCGAGAGGCGAG-CCA-GACGGATC GACC GACCCGTCGTGGTCTCGCCTCTCGGTC TCGCTCGGCCGAGGG TERM 30 91803 - 91752 - R 100 -26.9 -3.00525 | gap 2, opp_overlap 91766 91794 91797, overlap 91747 91750 CGGTCTCAAACGAGA CCGAGAGGCGAG-CCA-GACGGATC GACC GACCCGTCGTGGTCTCGCCTCTCGG TCTCGCTCGGCCGAG TERM 31 92185 - 92172 - R 79 -4.5 -4.96848 | opp_overlap 92167 92172 92173, overlap 92173 TCGCGCAGAGAAAAA CGAGG AATA CCTCA TTTTGTTTTGCTCAA TERM 32 92172 - 92185 + r 83 -2.3 -5.13722 | opp_overlap 92172 92173, overlap 92167 92173 TCGCGCAGAGAAAAA CGAGG AATA CCTCA TTTTGTTTTGCTCAA trd_0082 93852 - 92197 - | alpha-D-1,4-glucosidase TERM 33 93826 - 93859 + g 100 -20.3 -3.6608 | gap 1 CTCCCCGCACGGCGA GAGCGCCG-GCGAGCG ATT CGCCCGCACGGCGCTC TTTCGATCGCGTGAT trd_0083 94369 - 93878 - | hypothetical protein recG 94450 - 96873 + | ATP-dependent DNA helicase RecG TERM 34 96927 - 96944 + G 88 -14.1 -3.86015 | GACGAGAGCCTTCTC GGGCGCG TGCT CGCGCCC TTTCTCCGCCCAGTG trd_0086 96888 - 97676 + | hypothetical protein trd_0085 98257 - 97655 - | putative flavin reductase-like protein trd_0087 99400 - 98264 - | putative glycosyl transferase trd_0088 100728 - 99388 - | glycosyltransferase WbpY rpmB 100807 - 100998 + | ribosomal protein L28 trd_0090 101874 - 101023 - | methyltransferase, HemK family prfA 102974 - 101883 - | peptide chain release factor 1 trd_0092 103480 - 102971 - | conserved hypothetical protein TIGR00725 trd_0093 104052 - 103477 - | 2'-5' RNA ligase TERM 35 104058 - 104034 - G 86 -9.2 -4.57569 | opp_overlap 104021 104048 104052 GTATGGCGGCAAAAA GCCGCCACTC TTCAC GCATGGCGGC ACGACCTCGTGGCCT trd_0094 104245 - 104499 + | hypothetical protein trd_0095 104551 - 105408 + | P-protein trd_0096 105421 - 106008 + | N6-adenine-specific methylase TERM 36 106154 - 106168 + G 79 -2.7 -5.00616 | opp_overlap 106143 GCAACCCCTCTTCAG CGCCG AGGAG CGTCG TTTTTTGGCCGAACA coaD 106005 - 106508 + | pantetheine-phosphate adenylyltransferase trd_0098 106513 - 107001 + | hypothetical protein trd_0099 107246 - 107040 - | hypothetical protein trd_0100 109193 - 107247 - | putative methyl-accepting chemotaxis protein trd_0101 109424 - 109215 - | methyl-accepting chemotaxis protein McpL TERM 37 110162 - 110187 + H 100 -20.5 -5.27938 | ACCGCGGAGCCTGAC CCCTCCGTCCC TGAC GGGACGGAGGG TTTTTCTTTGGGAAT trpE 110224 - 111843 + | anthranilate synthase component I trd_0103 111840 - 112451 + | para-aminobenzoate synthase glutamine amidotransferase component II trpD 112448 - 113494 + | anthranilate phosphoribosyltransferase trpC 113491 - 114318 + | indole-3-glycerol phosphate synthase TERM 38 114659 - 114612 - g 86 -14.9 -3.55444 | gap 2, overlap 114637 TGGCCAGCCCTGAAA GCGATC-C-GGCTGCGGCCAGGC GAAA GCCTGGAGGCAGCCTGCGACCGC ATCGCGCCGTACTTC trpF 114303 - 114995 + | N-(5'phosphoribosyl)anthranilate isomerase TERM 39 115322 - 115291 - g 88 -14.4 -3.84873 | opp_overlap 115319, overlap 115292 ACACAAGATCAACAA CGCGGTCGGCCAGG GTCT CCTGGCCAAGCGCA TGGGGAAGCCGCGCG TERM 40 115321 - 115292 - g 80 -15.7 -2.8984 | opp_overlap 115319, overlap 115291 CACAAGATCAACAAC GCGGTCGGCCAGG GTCT CCTGGCCAAGCGC ATGGGGAAGCCGCGC trpB 114992 - 116206 + | tryptophan synthase, beta subunit TERM 41 116530 - 116553 + G 86 -10.3 -4.26202 | opp_overlap 116530 GGATACTTCAATCCA CTGCTCCAG TATGGT CTGGAGCGG TTTGTTCATGCGTGT trpA 116206 - 117036 + | tryptophan synthase, alpha subunit aroH 117043 - 117459 + | chorismate mutase aroF 117456 - 118514 + | phospho-2-dehydro-3-deoxyheptonate aldolase trd_0112 118523 - 119179 + | histidine biosynthesis bifunctional protein hisIE rimM 119718 - 119164 - | 16S rRNA processing protein RimM trd_0113 120028 - 119681 - | hypothetical protein rpsP 120340 - 120041 - | ribosomal protein S16 TERM 42 120777 - 120790 + r 85 -5.2 -5.02502 | overlap 120774 ACATCTCTGGTAGAC CGCC ACGGCG GGCG TTTTTCTCTCGTCTC trd_0115 121147 - 120815 - | putative Domain of unknown function TERM 43 121465 - 121430 - R 100 -20.6 -3.11634 | gap 1, overlap 121432 CGTGAGAGCAGCGAA CACGGGAGGCGCG-ATC AGC GATGCACGCCTCCCGTG CCATCCGGCGACGAT TERM 44 121463 - 121432 - R 88 -17.4 -3.11768 | gap 1, overlap 121430 TGAGAGCAGCGAACA CGGGAGGCGCG-ATC AGC GATGCACGCCTCCCG TGCCATCCGGCGACG trd_0116 122800 - 121514 - | acyl-CoA dehydrogenase trd_0117 124947 - 122797 - | putative pimeloyl-CoA synthetase TERM 45 123652 - 123642 - G 72 -8.2 -4.07568 | CGGTTCCTTGCAAAA CGGG AAT CCCG GCCGCGCGGAGGCGC trd_0118 125402 - 124965 - | thioesterase family protein trd_0119 126990 - 125806 - | putative transport system periplasmic protein TERM 46 127065 - 127049 - R 75 -12.3 -3.51232 | opp_overlap 127048 127047 GGGTCGGGAAAGGAA GCGCGAT GGC ATCGCGC ACTTTGCCAGGTTCC trd_0120 128195 - 127029 - | putative sarcosine oxidase subunit beta trd_0121 129378 - 128242 - | rieske 2Fe-2S domain protein trd_0122 129649 - 129467 - | hypothetical protein TERM 47 129726 - 129783 + r 100 -19.3 -3.53811 | gap 2, opp_overlap 129734 129738, overlap 129727 GTTCTCGGAAGCACC TCGACCAATCGAGCGGGGGACAGCGTG ATGGAC CACGCTGCCCCCCGCT-GAC-GGTCGG TTTGGGGAGAGTCGA TERM 48 129727 - 129782 + r 93 -20.6 -2.72144 | gap 2, opp_overlap 129734 129738, overlap 129726 TTCTCGGAAGCACCT CGACCAATCGAGCGGGGGACAGCGTG ATGGAC CACGCTGCCCCCCGCT-GAC-GGTCG GTTTGGGGAGAGTCG TERM 49 129776 - 129734 - R 100 -22.9 -3.16039 | gap 1, opp_overlap 129727 129726, overlap 129738 AAGCACCTCGACCAA TCGAGCGGGGGACAGCGTGA TGGA CCACGCTGCCCCCCGCT-GA CGGTCGGTTTGGGGA TERM 50 129773 - 129738 - R 100 -24.8 -2.56715 | opp_overlap 129727 129726, overlap 129734 ACCTCGACCAATCGA GCGGGGGACAGCGTGA TGGA CCACGCTGCCCCCCGC TGACGGTCGGTTTGG trd_0123 130970 - 129807 - | putative oxidoreductase protein TERM 51 130662 - 130676 + g 79 -5.6 -4.66163 | TCGCAGTTCTACCAG GCGCTG GAA CACCGC TTTTTCCATGGGACT trd_0124 131506 - 131009 - | Carbon monoxide dehydrogenase subunit G (CoxG) superfamily trd_0125 131800 - 133335 + | helix-turn-helix, Fis-type TERM 52 133703 - 133681 - T 74 -4.6 -4.56597 | opp_overlap 133682 CGGCGGTCTCAAAAA CCGCTGGGGG CGA CCCCGTGTGG GTTCGAGTCCCACCT trd_0127 134702 - 133752 - | transposase trd_0128 134759 - 134965 + | hypothetical protein trd_0129 135898 - 135215 - | GntR-family transcriptional regulator trd_0130 136790 - 135951 - | NADP oxidoreductase coenzyme F420-dependent family trd_0131 138155 - 136830 - | ygbK domain protein TERM 53 137194 - 137218 + g 93 -5.8 -5.33785 | gap 1 TGTGCGATCACGCTC TTGCCGCGACA CAAC TGTTGCG-CAA TTTTTTCTGCTACTT trd_0132 139411 - 138155 - | ribulose bisphosphate carboxylase TERM 54 138474 - 138456 - G 80 -14.6 -3.05463 | opp_overlap 138471 ATGTCGTGGATCGAA CGGACGAC ACT GTCGTCCG GCTCCCAGAATTTGT trd_0133 140465 - 139413 - | probable nadh-dependent dyhydrogenase trd_0134 142204 - 140462 - | hypothetical protein TERM 55 140947 - 140932 - G 71 -7.5 -4.07687 | ACGCTGCGCCGAAAA CGGCG TGAAGG CGCCG GTCCACTTGCTCCTC TERM 56 142183 - 142214 + g 70 -13.8 -2.60079 | gap 1, overlap 142180 TGCGATCGCGGACAG CGGGGTAGAGG-GAT TGA AACACCTCTACCCCG TCCATTGTGAGATGC trd_0135 143841 - 142309 - | putative Bacterial extracellular solute-binding protein TERM 57 143702 - 143685 - G 78 -12.7 -3.53224 | opp_overlap 143696 143698 GAGGTTCTCCCGAAA CTGCCGG GGTT CCGGCAG CGGCCTGTCCTGTTG trd_0136 144774 - 143893 - | possible multiple sugar transport system permease protein trd_0137 145684 - 144776 - | sugar abc transporter, permease protein trd_0138 146597 - 146292 - | hypothetical protein trd_0139 146988 - 146698 - | hypothetical protein trd_0140 148047 - 147115 - | putative purple acid phosphatase-like protein trd_0141 152910 - 148057 - | putative cable pili-associated 22 kDa adhesin protein TERM 58 148979 - 148958 - G 71 -13.1 -3.02511 | opp_overlap 148953, overlap 148963 TTCACTGCGGTAACA GTGAAGGTG TGCG CACCTTCAC TGAGGTTGGTGAGCG TERM 59 149817 - 149797 - G 75 -4 -4.63932 | opp_overlap 149797 GATGCGGTAAGAAAA CTCGCT GACAGGACG AGCGAG ATTTCCCAATGCGTA TERM 60 150795 - 150821 + g 79 -5.8 -4.66537 | opp_overlap 150799 TGACGAGTACGTCAT CGAAGCGGACGT CGA ATGTACGCTTGG TTTTATGTTCGCCGA trd_0142 154236 - 153163 - | hypothetical protein trd_0143 154717 - 154253 - | glycine cleavage system H protein trd_0144 155151 - 154714 - | GcvH trd_0145 155443 - 155144 - | hypothetical protein trd_0146 155913 - 155440 - | hypothetical protein trd_0147 157946 - 155910 - | heterodisulfide reductase trd_0148 158916 - 157951 - | electron transfer flavoprotein alpha-subunit trd_0149 159699 - 158932 - | electron transfer flavoprotein subunit beta trd_0150 160997 - 159696 - | iron-sulfur cluster-binding protein trd_0151 161810 - 161010 - | hypothetical protein TERM 61 161725 - 161767 + g 77 -9 -4.20696 | gap 1, overlap 161717 GATACTTGCTCGAGC CCTTCCCGGAGCGTCTCGG CCAGTT CCGGGTC-CTCCGGGCCGG TTTTGGGCTTGATGA trd_0152 162062 - 161820 - | hypothetical protein trd_0153 163183 - 162116 - | CoB--CoM heterodisulfide reductase iron-sulfur subunit A 1 TERM 62 162964 - 163001 + g 75 -14.1 -3.04144 | GCACTTCGATGAGGG GGTGATCGGTGACCGCG GCGA CGAGCTCGCCGATCGCC TCTTCGGCATCGCGA trd_0154 164411 - 163194 - | hypothetical protein trd_0155 165112 - 164408 - | metabolism heterodisulfide reductase C trd_0156 165378 - 165115 - | thioredoxin:Glutaredoxin:Thioredoxins/glutaredox i n trd_0157 165857 - 165375 - | glycine cleavage H protein trd_0158 166240 - 165857 - | hypothetical protein TERM 63 166180 - 166220 + g 75 -3.1 -4.82667 | overlap 166182 AGGGGGTGGCGCTGC GTTCCGGCGTGTCCACACC GTG GGTCTGGACATACAAGATC TTTTTGGTCTCCTCG trd_0159 166783 - 166262 - | hypothetical protein TERM 64 166436 - 166448 + g 70 -4.7 -4.41494 | opp_overlap 166436, overlap 166447 CCGCAGCTCGAGCAA GGAGG GAA CCCCC TTTTCCTTGAAGGTC trd_0160 167044 - 166802 - | Uncharacterized protein family UPF0033 trd_0161 167579 - 167325 - | hypothetical protein trd_0162 167677 - 168336 + | Translin family trd_0163 168770 - 168348 - | hypothetical protein trd_0164 170290 - 168824 - | Glycine cleavage system P-protein trd_0165 170523 - 171530 + | hypothetical Membrane Spanning Protein TERM 65 172528 - 172514 - g 70 -5.6 -4.2338 | overlap 172511 CAGGAAGATAAAGAA GGAGTC TTC GACGCC TACGACACCGTCGCA argH 171527 - 172984 + | argininosuccinate lyase TERM 66 173013 - 173003 - g 72 -8.2 -4.06904 | GCATCGAATCAGAAA CGCG TTC CGCG CAGCCACGAGCGATC argA 172981 - 173475 + | putative acetyltransferase TERM 67 173881 - 173898 + G 73 -6.3 -4.41895 | gap 1, overlap 173852 TCCGCTCACGCATCC CCTCG-TG TGG CATCGAGG TTTTGATTCCCGATT lipA 173475 - 174386 + | lipoic acid synthetase lipB 174392 - 175135 + | lipoate-protein ligase B trd_0169 177932 - 175086 - | putative DNA helicase trd_0171 178030 - 179187 + | mannosyltransferase B thiL 179184 - 180209 + | thiamine-monophosphate kinase trd_0173 180266 - 181693 + | glutamyl-tRNA(Gln) amidotransferase subunit A trd_0174 181690 - 182229 + | Uncharacterized P-loop hydrolase UPF0079 trd_0175 182192 - 182920 + | putative glycoprotease family trd_0176 182898 - 183608 + | ribosomal-protein-alanine acetyltransferase trd_0177 183605 - 184702 + | O-sialoglycoprotein endopeptidase TERM 68 184988 - 185002 + G 70 -2.1 -4.61868 | gap 1 ACGACCAACTATGCT CA-CGG GTAC CCGATG TTTTGTGTCTCGATC trd_0178 184706 - 185503 + | inositol-1-monophosphatase trd_0179 185500 - 186459 + | histone deacetylase family protein TERM 69 186709 - 186726 + G 72 -3.4 -4.64676 | overlap 186710 TTCCCTTCCTCGGAA TCTGCA TGGGAC TGCAGG TTTTGTTGGAGGTCA hisH 186474 - 187118 + | imidazole glycerol phosphate synthase, glutamine amidotransferase subunit TERM 70 187454 - 187474 + G 80 -14.7 -3.12351 | GAGCGCCCGGATATG CTGCGCGAG GCG CTCGCGCGG TTCGGTGTCGAACGA hisA 187115 - 187849 + | phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase trd_0182 187846 - 188964 + | hypothetical protein TERM 71 189290 - 189306 + G 81 -12.3 -3.85817 | GGCAGCTGTTCTCGA CCCGGAT CTG ATCCGGG TTTGTGCGCAGCGGT hisF 188964 - 189746 + | imidazoleglycerol phosphate synthase, cyclase subunit trd_0184 189972 - 191255 + | cell wall-associated hydrolases TERM 72 191320 - 191272 - T 88 -17.5 -3.03243 | gap 1, opp_overlap 191279 191283 ACGTACGCTCGAACA GCCGATCCGG-ACGGCCAGGTG GGATCT CACCTGGCCGTTCCATTTCGGC GCACTTTCGAGCGGA TERM 73 191279 - 191313 + T 78 -12.9 -3.54935 | gap 1, opp_overlap 191272, overlap 191283 CTCGAACAGCCGATC CGG-ACGGCCAGGTGG GATC TCACCTGGCCGTTCCA TTTCGGCGCACTTTC TERM 74 191283 - 191308 + T 89 -16.9 -3.27525 | opp_overlap 191272, overlap 191279 AACAGCCGATCCGGA CGGCCAGGTGG GATC TCACCTGGCCG TTCCATTTCGGCGCA trd_0185 191447 - 191298 - | hypothetical protein trd_0186 192536 - 191637 - | putative permease trd_0187 193465 - 192551 - | putative ABC transporter ATP-binding protein TERM 75 193245 - 193202 - G 81 -7.4 -4.46155 | gap 1, opp_overlap 193210 GAGATACGGATAAAA GCTGGCGACTTCGG-GCGT GAGTCCG ACGCGCCGAAGTTGCTCGC GGCTCTCGGCCAACG TERM 76 193302 - 193276 - G 88 -15.9 -3.41988 | overlap 193274 193277 GGCGACCGAACAAGA CGATCCGGCCC GCGGT GGGCCGGATCA AACCAGCGATCATCG TERM 77 193301 - 193277 - G 83 -17.2 -2.64872 | overlap 193276 193274 GCGACCGAACAAGAC GATCCGGCCC GCGGT GGGCCGGATC AAACCAGCGATCATC recA 194574 - 193510 - | recA protein trd_0189 194998 - 194660 - | Protein of unknown function (DUF970) superfamily trd_0190 196659 - 194995 - | ABC transporter, ATP-binding protein TERM 78 195281 - 195319 + g 76 -13.7 -3.05463 | opp_overlap 195272 AGGACAGCAGCCCCC GCAGCAGCACGCCGGCG CAGCT CGCTGGCGAGACGCTGC TTGAGTCGCAACCCT TERM 79 195487 - 195468 - G 76 -13.6 -3.06261 | GGTGAAGTTCGAAGA GGTCGACG ATCT CGTCGACC GCAGTCGTGCTGACC trd_0191 197651 - 196656 - | putative Cobalt transport protein trd_0192 198586 - 197648 - | hypothetical protein trd_0193 200088 - 198583 - | Prenyltransferase and squalene oxidase repeat domain protein TERM 80 200185 - 200165 - R 86 -14 -3.75505 | overlap 200131 200159 TTGGAAAAACGAGAA CAGCCCGC ACGGG GCGGGCTG CCAATGGTTCACTGC trd_0194 202062 - 200776 - | 1,3-propanediol dehydrogenase trd_0195 203071 - 202202 - | purine nucleoside phosphorylase recO 203870 - 203034 - | DNA repair protein RecO trd_0197 204508 - 203867 - | putative aldolase trd_0199 204586 - 205449 + | putative NAD(+) kinase trd_0198 206055 - 205435 - | hypothetical protein trd_0200 206422 - 206078 - | Protein of unknown function (DUF970) superfamily tmk 207051 - 206419 - | thymidylate kinase trd_0202 208736 - 207048 - | ATPase-like protein TERM 81 207883 - 207869 - G 70 -5.6 -4.2679 | opp_overlap 207868 GAATCTCGACCAAAA CGCCGA AGG TCGGTG GTGCCTTGCGTTCCA trd_0203 209781 - 208795 - | hypothetical protein TERM 82 209721 - 209681 - G 70 -4.8 -4.39166 | gap 1, overlap 209705 GGCGAGAGATGAAAA GCAGCTGGCAGTGCG ACCAAATCACCG CGCAATGC-AGCTGC CGGCTGATCGGGCGA recR 210417 - 209812 - | recombination protein RecR trd_0205 212734 - 210497 - | DNA translocase ftsK trd_0206 213476 - 212784 - | phage DNA polymerase-related protein TERM 83 213066 - 213036 - GR 88 -17.6 -3.08679 | GCGTGCCATCGAATA GCGCCCGAGCGTCA CGA TGACGCTCGGACGA ATCACCGCGATCTGC trd_0207 215394 - 213313 - | DNA polymerase III, epsilon subunit trd_0208 215558 - 215391 - | hypothetical protein ligA 215547 - 217634 + | DNA ligase, NAD-dependent pyrE 218201 - 217629 - | orotate phosphoribosyltransferase trd_0211 219505 - 218177 - | vacuolar cation/proton exchanger 1a TERM 84 218402 - 218389 - G 75 -9.5 -4.05446 | GGCGCGAATGAGAAA CCGGG AGCT CCCGG TACGAAGACGTGTCG carB 222751 - 219515 - | carbamoyl-phosphate synthase, large subunit TERM 85 219610 - 219569 - G 76 -9.3 -4.18018 | gap 1 CGGTTGGACGGAAAA GCTCGTGCCGCCGC-CGAGC AGA GCTCGCACGAGTGCACGGGC CGTATCCAGACTCGT TERM 86 221796 - 221815 + g 72 -11.4 -3.53444 | TTGGCTGCGATGCGG GCGATCGG ATAC CCGGTCGC TTTGGAGGCCAGTGC TERM 87 222032 - 222044 + g 72 -3.3 -4.67943 | overlap 222026 GCCGGTATGCACGCC CATCG GGT CGAGG TTTTCTATGTTGCAG TERM 88 222506 - 222550 + g 76 -14.3 -3.12351 | gap 1, overlap 222484 CAGCAAGCCTTCCGG CCGCTCGCGGGCGATGATGC GTTCGA GCACC-TCGACCGTGAGCGG TTCGATGTAGACGGC carA 223905 - 222754 - | carbamoyl-phosphate synthase, small subunit TERM 89 223656 - 223680 + gr 71 -9.1 -3.75738 | overlap 223657 ACTCGCGGACGATCA GCCCGGCGGCC CAC GGGCGTCGGGA TTGTTCGTCCTCGTC TERM 90 223773 - 223754 - GR 91 -8.6 -4.83169 | gap 1, opp_overlap 223754 AGTTGCCCATAAAAA GAGG-GGTC AGT GACCACCTC TTGATAACCAGTCAT trd_0214 225205 - 223814 - | dihydroorotase TERM 91 225258 - 225228 - R 100 -19.9 -5.27923 | GAACCCCATAAAAAA GGCCTCTGGATTC GGGCT GAATCCAGAGGCC CGCTCGCTCGCTCGA maf 226267 - 225611 - | septum formation protein Maf rumA 227484 - 226264 - | 23S rRNA (uracil-5-)-methyltransferase RumA trd_0217 227907 - 228257 + | S-adenosylmethionine decarboxylase proenzyme speE 228250 - 229188 + | spermidine synthase TERM 92 229209 - 229239 + T 100 -27 -4.07647 | GACCATCGCTTTCGA CGGGGGTACGGTGC GAC GCACCGTACCCCCG TTTCGTTTGCGCTCT trd_0219 230604 - 229339 - | hypothetical protein trd_0220 231695 - 230715 - | efflux transporter, RND family, MFP subunit TERM 93 231288 - 231302 + g 71 -9.2 -3.71848 | opp_overlap 231282, overlap 231289 CTCATCGAACGCGCG TGCCGC CTC GCGGCG TTGTTGCTCAGCCCG trd_0221 234039 - 231688 - | putative permease domain protein trd_0222 234145 - 234294 + | hypothetical protein TERM 94 235068 - 235054 - g 77 -12.8 -3.30771 | opp_overlap 235053 CTACACGGGCGAGAA GGCGCG CAA CGCGCC CTTCAATCTCAAGCC trd_0223 234320 - 236191 + | peptide/opine/nickel uptake family ABC transporter, periplasmic substrate-binding protein TERM 95 236238 - 236213 - T 83 -14.7 -3.19522 | opp_overlap 236215, overlap 236215 236231 TTAGCCAACAGGCAA GACCGGGCTGG GATA CCAGCCCGGTT TTCATTTACCGTGCA TERM 96 236215 - 236236 + T 100 -17.3 -4.55798 | opp_overlap 236213 236215 236231 AGCCAACAGGCAAGA CCGGGCTGG GATA CCAGCCCGG TTTTCATTTACCGTG TERM 97 236236 - 236215 - T 88 -17.3 -3.1577 | opp_overlap 236215, overlap 236213 236231 AGCCAACAGGCAAGA CCGGGCTGG GATA CCAGCCCGG TTTTCATTTACCGTG trd_0224 236945 - 236244 - | putative ABC superfamily (atp&memb) transport protein trd_0225 237228 - 236968 - | Transglycosylase associated protein trmD 238021 - 237215 - | tRNA (guanine-N1)-methyltransferase trd_0227 239394 - 238078 - | HD domain protein TERM 98 239535 - 239568 + r 75 -11.8 -3.48668 | gap 1 ATCCGGAGACGGCGA GCCCCGGCCTCAC GAACTGACA GTGAG-CCGGGGC TTCTGGTCTGCTCCT trd_0228 239732 - 239583 - | hypothetical protein rfbB 240059 - 241093 + | dTDP-glucose 4,6-dehydratase trd_0230 241090 - 241803 + | putative Stage II sporulation protein E (SpoIIE) trd_0231 241858 - 242208 + | hypothetical protein trd_0232 242198 - 243919 + | putative oligopeptide-binding protein trd_0233 243946 - 244833 + | acetyltransferase, GNAT family aroC 244839 - 245906 + | chorismate synthase aroA 247215 - 245911 - | 3-phosphoshikimate 1-carboxyvinyltransferase trd_0236 247681 - 247226 - | dTDP-4-dehydrorhamnose 3,5-epimerase trd_0237 248512 - 247703 - | putative S-adenosylmethionine (SAM)-dependent methyltransferase smpB 248683 - 249165 + | SsrA-binding protein TERM 99 249704 - 249734 + T 83 -9.6 -4.36914 | opp_overlap 249707, overlap 249705 249707 CCCCATCTCCACCAG AAAGCGCCTCGGCA GCT TGTCGGGGCGCTCG TTTTCTGCACCCCGC TERM 100 249705 - 249733 + T 74 -13.1 -3.21934 | opp_overlap 249707, overlap 249704 249707 CCCATCTCCACCAGA AAGCGCCTCGGCA GCT TGTCGGGGCGCTC GTTTTCTGCACCCCG TERM 101 249707 - 249731 + T 86 -15.7 -3.1733 | opp_overlap 249707, overlap 249705 249704 CATCTCCACCAGAAA GCGCCTCGGCA GCT TGTCGGGGCGC TCGTTTTCTGCACCC TERM 102 249731 - 249707 - T 81 -11.3 -3.96624 | opp_overlap 249705 249704 249707 CATCTCCACCAGAAA GCGCCTCGGCA GCT TGTCGGGGCGC TCGTTTTCTGCACCC trd_0240 250262 - 250101 - | hypothetical protein trd_0241 250693 - 250340 - | hypothetical protein trd_0242 251166 - 250690 - | hypothetical protein trd_0243 251498 - 251166 - | hypothetical protein TERM 103 251576 - 251536 - R 84 -17.5 -2.74012 | opp_overlap 251550 251554 GGAGGAGCCGAACGA TCGGTGCCCTGGCCCGAGC GTC GCTCGGACCAGGGCACTCC CGTGGAGGGAGGGAC trd_0244 252179 - 251598 - | hypothetical protein trd_0245 253030 - 252176 - | Amidohydrolase family trd_0246 254018 - 253002 - | D-threo-aldose 1-dehydrogenase trd_0247 254395 - 254015 - | Protein of unknown function (DUF718) superfamily trd_0248 255161 - 254409 - | putative dehydrogenase trd_0249 256206 - 255181 - | inner membrane ABC transporter permease protein ycjP trd_0250 257395 - 256217 - | transporter TERM 104 256797 - 256775 - G 78 -10.6 -3.96624 | CATGGGGAGGAGAAA GACGACGC GGAAGAA GCGTCGTC CTGGTAGCTGCTGGG TERM 105 257321 - 257356 + g 86 -15.4 -3.18023 | gap 1, overlap 257319 TCGCTCGCGGCTGAG GGGGATGCGG-CGGGTC GGT GCCGCGACCGCATCCCC TGTTCGTGGTGGTAA trd_0251 258953 - 257418 - | putative ABC transporter solute-binding protein trd_0252 259777 - 258950 - | transcriptional regulator, IclR family, C-terminal domain protein trd_0253 259996 - 260124 + | hypothetical protein trd_0254 261127 - 260372 - | hypothetical protein trd_0255 261919 - 261743 - | hypothetical protein trd_0256 262222 - 261926 - | hypothetical protein TERM 106 262048 - 262016 - G 76 -14.2 -3.14132 | gap 2, opp_overlap 262034, overlap 262001 CCGTGTCTCGAGCAA CCCGCGCGCCGATGCG AGC CGC-TC-GCGCGCGAG CGCGGCGATCTGCTC trd_0257 262924 - 263499 + | putative amino acid ABC transporter, periplasmic amino-acid binding protein trd_0258 263673 - 263545 - | hypothetical protein trd_0259 263731 - 263964 + | putative ABC transport system, substrate-binding protein trd_0260 264320 - 265780 + | glycolate oxidase subunit glcD trd_0261 265790 - 267085 + | glycolate oxidase subunit glcE trd_0262 267107 - 268456 + | 4Fe-4S ferredoxin, iron-sulfur binding:Protein of unknown function, cysteine-rich region TERM 107 269591 - 269626 + G 76 -14.1 -3.07113 | gap 1, opp_overlap 269589 GAACTCGACGAGACG GCGTACCAGGAGCAGC GATCA GCTG-TCCTGGCACGC TTGCGTCAGCTCGTC trd_0263 268496 - 269674 + | hypothetical protein TERM 108 270000 - 270012 + G 71 -10.5 -3.68351 | GACGAACTTCGTGGA GCCGG TGA CCGGC TTTGCCTGGTCCCCG trd_0264 269677 - 271650 + | acylamino-acid-releasing enzyme (ec) (acyl-peptide hydrolase) (aph) trd_0265 272916 - 271657 - | putative nuclease SbcCD, D subunit subfamily trd_0266 274558 - 272933 - | Domain of unknown function domain protein TERM 109 273016 - 272999 - G 77 -12.7 -3.35867 | opp_overlap 272995 CCAACCGCGAACCAA CGCGAGG ATCT CCTCGCG TCGATACTGTCGGGT TERM 110 274751 - 274809 + G 72 -9 -4.07568 | overlap 274753 274793 GGCACTGCATTGGAT CACCCGTG-CGG-CGACGAGCAGTCTCGAC CTC GACGAGA-TGCTC-TCGACCGTCACGCGGG TTTTGCGCGAGACGA trd_0267 274641 - 276347 + | probable two component sensor kinase trd_0268 276447 - 277205 + | putative short chain dehydrogenase trd_0269 278267 - 277218 - | putative aminopeptidase from family M42 TERM 111 277594 - 277629 + g 75 -4.5 -4.71426 | overlap 277595 GCCCAGTCGACGTCC AGGTCAGCTCGGAGC GAGCTG GCTCCGAGGAGTCCG TTTTCTTCCTGCACG trd_0270 278471 - 278995 + | hypothetical protein trd_0271 279132 - 279254 + | hypothetical protein trd_0272 279298 - 280035 + | macrolide-specific ABC-type efflux carrier TERM 112 281191 - 281229 + G 70 -2.5 -4.59773 | gap 2, overlap 281188 281192 GGCGTTGCCGTCGCG TTCAC-GATC-GCTGGCTT CAT GGGTCAGCTGGTCGGTGAG TTTTTCACCATCGAG trd_0273 280042 - 283005 + | putative ABC transport system integral membrane protein TERM 113 283651 - 283705 + G 83 -9.5 -4.3898 | overlap 283651 283652 TCACTGGTGCATTGG C-GGCGCTCTTCGTCGCGGC-AGCTGG GTTGA CCGGCTTGGC-CGACGAAGAG-GCCAG TTTTCTCCAGGTGGT trd_0274 283014 - 284168 + | hypothetical protein trd_0275 284180 - 284518 + | methylated-DNA-[protein]-cysteine S-methyltransferase trd_0276 284595 - 284711 + | methylated-DNA--protein-cysteine methyltransferase trd_0277 285475 - 284720 - | putative integral membrane protein trd_0278 285820 - 285545 - | hypothetical protein trd_0279 285848 - 285976 + | hypothetical protein trd_0280 286829 - 286116 - | phosphoglycolate phosphatase trd_0281 288175 - 286829 - | peptidase, M20/M25/M40 family TERM 114 287781 - 287755 - G 88 -10.9 -4.28375 | gap 1 CGAAGACAGCGAAAA TGAGG-TCCCGC TCCA GCGGGAGCCCCA GGCGCTGAATCGTCA trd_0282 289101 - 288172 - | putative integral membrane protein trd_0284 289333 - 289791 + | curved DNA-binding protein trd_0283 290636 - 289788 - | beta-lactamase-like protein trd_0286 290753 - 291568 + | putative lipoprotein trd_0285 292383 - 291565 - | enoyl-CoA hydratase/isomerase family protein trd_0287 292603 - 293775 + | hypothetical protein TERM 115 294582 - 294627 + GF 77 -11.8 -3.64703 | overlap 294585 CGACTATCCGCGCGA CGAGGTGGCGAGCGCCGT CCTGACGGCC GCGGCTCTCGCCGCCTGG TTTGACTCGGACACG trd_0288 293821 - 295017 + | hypothetical protein trd_0289 294804 - 295229 + | bkrf1 encodes ebna-1 protein-like protein TERM 116 295412 - 295389 - f 89 -16.8 -3.27298 | GGTCTGAAGCACGAA GCGGACGATC ACAG GATCGTCCGC ACGTTCGGAGCGGGA TERM 117 295467 - 295451 - f 73 -12.3 -3.31322 | opp_overlap 295463 TCGAACCCGCGACAA CCGGCTT GGG AAGCCGG CACTCTACCAGCTGA trd_0292 296156 - 296428 + | hypothetical protein TERM 118 296430 - 296478 + T 75 -14.6 -2.70932 | gap 2, opp_overlap 296440 ATGAGCGCGCCTGAC TCCAAGCACAGCGGAGGGGGCTCG GTG CAAGCCCCCTCCGC-GAGCT-GAA TGATTGCCCGAAACG TERM 119 296470 - 296440 - T 100 -24.8 -2.91274 | opp_overlap 296430 CTGACTCCAAGCACA GCGGAGGGGGCTCG GTG CAAGCCCCCTCCGC GAGCTGAATGATTGC trd_0293 298453 - 296495 - | metalloprotease FtsH trd_0294 298705 - 298529 - | hypothetical protein trd_0295 300875 - 298788 - | putative bifunctional protein tilS/hprT TERM 120 300847 - 300818 - G 79 -10.7 -4.07885 | gap 1, opp_overlap 300819 300824, overlap 300824 GATTCTCGCCCAAAA GCGAAAGCGGCGCA ACT TGCGCCGCTC-CGT TCGGTGCCGGTGGGC TERM 121 300824 - 300842 + g 77 -16 -2.54896 | opp_overlap 300818 300824, overlap 300819 CGCCCAAAAGCGAAA GCGGCGCA ACT TGCGCCGC TCCGTTCGGTGCCGG TERM 122 300842 - 300824 - G 93 -16 -3.92659 | opp_overlap 300824 300819, overlap 300818 CGCCCAAAAGCGAAA GCGGCGCA ACT TGCGCCGC TCCGTTCGGTGCCGG TERM 123 301211 - 301187 - R 73 -5.6 -4.3534 | overlap 301171 GGCCAAGGAGGAAAA GCATCCCCCG TGGCC CGGGAGCTAC TCACCGATATCCTTG trd_0297 302023 - 301208 - | oxidoreductase, short-chain dehydrogenase/reductase family trd_0298 302862 - 302041 - | putative 3-oxoacyl-(acyl carrier protein) reductase trd_0299 304294 - 303248 - | hypothetical protein trd_0301 305113 - 304841 - | hypothetical protein trd_0302 305861 - 305169 - | 3-oxoadipate CoA-succinyl transferase beta subunit trd_0303 306571 - 305873 - | IpsJ protein trd_0304 306683 - 306796 + | hypothetical protein trd_0305 306839 - 309154 + | ATP-dependent DNA helicase pcrA ppdK 309221 - 311869 + | pyruvate, phosphate dikinase trd_0307 312107 - 313069 + | putative aromatic metabolite ABC transporter trd_0308 313764 - 313147 - | superoxide dismutase (Mn) trd_0309 315609 - 314011 - | biuret hydrolase TERM 124 314200 - 314237 + g 71 -11.9 -3.28712 | overlap 314187 CAGCCAGCTCGCTCG CGCTGTCCACTGCCC GAGCGGCG GGGCTGTGGTCGGCG TTGTCGGGAGAGCCA TERM 125 314280 - 314302 + g 71 -10.6 -3.62597 | opp_overlap 314280 CGTGCTCCTCGAGAA GGCTCGTG ACCCGCG CACGAGCC TTCTTCGCCAGTCGC trd_0311 315703 - 316428 + | probable transferase protein trd_0310 316862 - 316419 - | OsmC-like protein trd_0312 317900 - 316986 - | putative halocarboxylic acid dehalogenase DehI trd_0313 318057 - 319172 + | hypothetical protein TERM 126 319597 - 319614 + G 86 -9.1 -4.56597 | CTCCTGCCAGATCGG CTGCGCC ATCG GGTGCAG TTTTTGCGCGACCGG trd_0314 319193 - 320332 + | radical SAM enzyme, Cfr family TERM 127 320621 - 320633 + G 74 -4.7 -4.57569 | opp_overlap 320621 CCGCGGGTGAAAGAG CGGGC GCT GGCCG TTTTTCGGCGACTCG trd_0315 320345 - 321565 + | conserved hypothetical protein TIGR00299 TERM 128 322079 - 322092 + G 75 -8.1 -4.30576 | opp_overlap 322065, overlap 322078 AGTCTCGACGACCTG GCGTC GGAC GACGC TTTTGATCCTGGCGA trd_0316 321726 - 322550 + | ZIP zinc transporter family protein TERM 129 323356 - 323371 + G 81 -5.4 -4.94972 | gap 1, opp_overlap 323327 CGGTGTGAGCTTCGA GC-TCCC GGA GGGACGC TTTTTGGTTGTCGTC trd_0317 323225 - 324049 + | ABC transporter ATP-binding protein trd_0318 324046 - 324879 + | putative ABC transport proteins, inner membrane component trd_0319 324876 - 325067 + | hypothetical protein trd_0320 325884 - 325771 - | hypothetical protein TERM 130 326031 - 326050 + r 77 -4.8 -4.63218 | opp_overlap 326043, overlap 326030 CGCGACGATTCGGTT GCGGCGAG CATA CGCGCAGC TTTTGTTCAACAGCG trd_0321 326460 - 326254 - | hypothetical protein TERM 131 326526 - 326578 + r 93 -17.5 -3.6502 | overlap 326532 326533 TCGTGAACCAGTGGT CATGCTGAGGCCACCCGTCCCGCTC GAT GAGCGGGACGGGTGGCCAGTTCTCG TTTCACTGGCGGGTC TERM 132 326532 - 326572 + r 100 -26.9 -3.61609 | overlap 326526 326533 ACCAGTGGTCATGCT GAGGCCACCCGTCCCGCTC GAT GAGCGGGACGGGTGGCCAG TTCTCGTTTCACTGG TERM 133 326533 - 326571 + r 100 -30.4 -2.76483 | overlap 326532 326526 CCAGTGGTCATGCTG AGGCCACCCGTCCCGCTC GAT GAGCGGGACGGGTGGCCA GTTCTCGTTTCACTG trd_0322 327587 - 326592 - | catechol 2,3-dioxygenase trd_0323 329000 - 327744 - | pyoverdin chromophore biosynthetic protein pvcC trd_0324 329305 - 328997 - | pyoverdin chromophore biosynthetic protein pvcC trd_0325 329521 - 329372 - | hypothetical protein trd_0326 329775 - 329563 - | hypothetical protein trd_0327 330116 - 329757 - | hypothetical protein TERM 134 330966 - 330937 - g 74 -11.5 -3.65046 | gap 1, opp_overlap 330946 CTTGCACCTGAACAA CTCAAGGAG-CGGA CTG TCCGTCTCCTGGAG CGATTCTGGCGGGAG trd_0328 330454 - 331647 + | transcriptional regulator, ArsR family protein TERM 135 331785 - 331812 + T 95 -15.6 -4.07568 | GCGATCGGCCCGATC GACGACGGGGAC GCAA GTCCCCTTCGTC TTTTACCGGGGGGCA TERM 136 331978 - 331955 - T 100 -19.6 -3.48276 | GCGCGGGTCAGAGAA CGGGGCCGTC AGCC GACGGCCCCG GGTACAGGGAGGGAG TERM 137 332619 - 332658 + T 81 -13.7 -3.53012 | gap 2, overlap 332620 GGTGCACGGTCCGTT C-AT-CGGGCCACAGCGGT CATG GCCGCTGTGGCCCGCGTCG TTTCCAGAAAGCAGA TERM 138 332620 - 332655 + T 84 -16.8 -2.90496 | overlap 332619 GTGCACGGTCCGTTC ATCGGGCCACAGCGGT CATG GCCGCTGTGGCCCGCG TCGTTTCCAGAAAGC trd_0329 333156 - 332689 - | hypothetical protein trd_0330 333864 - 333169 - | succinate dehydrogenase iron-sulfur protein TERM 139 333366 - 333346 - G 82 -4 -5.08601 | gap 1, overlap 333301 CGAGTCGAACAAAAA GCGAT-GCG CGTT CACGATCGC GGCCGGGCCGAGCCA nadB 335596 - 333866 - | succinate dehydrogenase, flavoprotein subunit trd_0332 336013 - 335600 - | succinate dehydrogenase, membrane subunit trd_0333 336451 - 336032 - | succinate dehydrogenase, cytochrome subunit trd_0334 336641 - 337762 + | peptidase, M20/M25/M40 family TERM 140 338505 - 338523 + G 87 -14.6 -3.60627 | opp_overlap 338507 ACCACGCCTCGAACC GACCGGTG AGG CACCGGTC TTTGACCTCGACTGG trd_0335 337789 - 340737 + | exonuclease family TERM 141 340834 - 340816 - g 79 -11.6 -3.88232 | opp_overlap 340820 GCGTGGAGACAAGAA CGCAGCGG ATG CCGCAGCG GTGCAGGCGATGCGG glpX 340718 - 341725 + | fructose-1,6-bisphosphatase, class II TERM 142 341749 - 341728 - f 73 -5.7 -4.35116 | opp_overlap 341731, overlap 341730 341731 CATGGTAGAGTAAAA GAGCGCGGG TTGA CCCGCGTTG TCTCATGCCTCTCCA TERM 143 341731 - 341746 + F 75 -11.8 -3.55714 | opp_overlap 341731 341730 341728 GGTAGAGTAAAAGAG CGCGGG TTGA CCCGCG TTGTCTCATGCCTCT rho 342050 - 343354 + | transcription termination factor Rho TERM 144 343731 - 343777 + G 74 -2.7 -4.7254 | CACGTCTCCTCGGTG GGCTGGTGCTCCTGGCGCTCG CCATC CTGGCGCTCGGACAACTCGCC TTTTTCCTGGGCGGT trd_0338 343394 - 343816 + | hypothetical protein trd_0339 344580 - 343822 - | putative hydrolase, alpha/beta fold family TERM 145 343948 - 343907 - G 80 -15.8 -2.91144 | overlap 343904 343927 343929 CGATGTGGGAAATGA CCGGCGCGCGGCAGGAGA CAGAGT TCTCCTGCCGGTAGCCGG CTGGCGATGTCGACG trd_0340 344668 - 344865 + | hypothetical protein trd_0342 344889 - 346388 + | predicted ABC-type ATPase trd_0341 347136 - 346339 - | conserved hypothetical protein TIGR00046 prmA 348053 - 347133 - | ribosomal protein L11 methyltransferase trd_0344 349050 - 348058 - | putative glucose-1-phosphate thymidylyltransferase TERM 146 349236 - 349222 - H 83 -9.2 -4.386 | GAACGCTTGAGAAAA CCGGGG TGC CCCCAG CGGGATTCGAACCCG trd_0346 349381 - 349992 + | hypothetical protein coaBC 349970 - 351181 + | phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase trd_0348 351178 - 351519 + | hypothetical protein trd_0349 351648 - 351770 + | hypothetical protein trd_0350 351819 - 352988 + | putative peptide chain release factor subunit 1 TERM 147 353194 - 353233 + G 93 -17.2 -3.74693 | gap 1, overlap 353197 TGGGGACGGTACAGC GAGCCGCGTCGCTGCGGGC GTC GTCGGCAGCGATGCGG-TC TTTAGTGCACTGCCC TERM 148 353197 - 353231 + G 100 -20 -3.4582 | overlap 353194 GGACGGTACAGCGAG CCGCGTCGCTGCGGGC GTC GTCGGCAGCGATGCGG TCTTTAGTGCACTGC TERM 149 353498 - 353508 + G 72 -8.2 -4.13945 | overlap 353484 CGCCATCTGCTGGAC GGCC CAT GGCC TTTTACGGTCGAGGT TERM 150 353536 - 353561 + G 72 -8.9 -4.09864 | GGTCGATGGGATCCA GCACGTGGTGC GTGC GCGCAGCGTGC TTTTGGCGAATGGCT trd_0351 352985 - 353893 + | Diacylglycerol kinase catalytic domain (presumed) protein trd_0352 354782 - 353916 - | hypothetical protein trd_0353 355554 - 354793 - | hypothetical protein TERM 151 355607 - 355582 - H 78 -13.9 -3.1855 | overlap 355577 TCCCCGAACAGCGAA CACGGCGCGGC CGCT GCCGCCCCGCG CGATGGTCCCTCGCC miaB 355758 - 357134 + | tRNA-i(6)A37 thiotransferase enzyme MiaB trd_0355 357159 - 358052 + | TPR domain protein TERM 152 358075 - 358102 + T 95 -17 -4.14511 | GCCGCAGATCCGCGA GCCCTCGTCCCC TCGA GAGGACGAGGGC TTTTCGCGTCGGGTT trd_0356 358383 - 358117 - | hypothetical protein trd_0357 359237 - 358425 - | Protein of unknown function superfamily TERM 153 358489 - 358507 + g 72 -11 -3.53091 | CAGGTTGCCGCAGCA TTGCCGTC GCG GACGGCGA TTTCCAAGCCACCGT ggt 360881 - 359250 - | gamma-glutamyltransferase trd_0359 361528 - 360878 - | molybdopterin-guanine dinucleotide biosynthesis protein trd_0360 361887 - 362201 + | SWIM zinc finger domain protein trd_0361 362492 - 363154 + | hypothetical protein trd_0362 364061 - 363159 - | polysaccharide deacetylase family protein TERM 154 364351 - 364385 + G 82 -7.1 -4.62069 | opp_overlap 364346 TGGTGGAGAAGCGGT CGTCC-GCACGCTCGAG CGG CTCG-GCGTGGAGGTCG TTTTTGGCATCCCGG TERM 155 364492 - 364535 + G 78 -15.4 -2.70932 | gap 1 TGCGGGCTTTATGGC CGATGGGTACGCGCGGGTTTC GGG GAAGCCCG-GTGTGGCCATCG TCATTACCGGACCGG trd_0363 364325 - 365935 + | probable acetolactate synthase large subunit trd_0364 366056 - 366169 + | hypothetical protein TERM 156 366189 - 366228 + G 100 -20 -3.53012 | gap 1, opp_overlap 366181 366178 ATAACCAGTGGATGA CGATGAGGCGGCCTCCCCG ACG CGGGGAGGCCGCCG-AGCG TTTCCGAGAAGGAAG trd_0365 366185 - 367873 + | 2-isopropylmalate synthase/homocitrate synthase family protein TERM 157 367874 - 367911 + T 100 -27.1 -3.09516 | TCAGCTGTTTCGTGA GCGAGAGCGCGGCAGGG CGCG CCCTGCCGCGCTCTCGG TTGCGTCCTAGAGCA asd 368971 - 367919 - | aspartate-semialdehyde dehydrogenase TERM 158 369035 - 369010 - H 100 -16.9 -4.84311 | opp_overlap 369008 GCCGATACAACAAAA CCGGCAGAGGT CGCA ACCCCTGCCGG CATTCGCTCGAGTTC trd_0367 369259 - 370257 + | homoserine dehydrogenase TERM 159 370318 - 370285 - T 100 -25.5 -4.50976 | TTCGACAGGAGAAAA CCGACGAGCTGGACA CCGC TGTCCAGCTCGTCGG GGCGCGTCGCGATGC TERM 160 370333 - 370359 + T 74 -10 -3.72989 | overlap 370331 GGGCGCGTCGCGATG CTGCTCGCGGGC AGC GCGCGCAGGCAG TTTCGGTATAGCTTT metX 371618 - 370374 - | homoserine O-acetyltransferase trd_0369 372949 - 371849 - | putative AttH TERM 161 372846 - 372869 + g 74 -14.6 -2.64616 | GCTGGTCGCGGGCTG GCTGATGGGG TCGG CCCCATCGGC TCCTGTGACTGCGGC trd_0370 375160 - 372950 - | putative membrane protein mmpL3 TERM 162 375153 - 375137 - G 79 -6.5 -4.56914 | GTAGCGAAAGGAAAA TCGACCG ATG CGCTCGA ACACCATTGTCCCTC trd_0371 376826 - 375234 - | trehalose-6-phosphate synthase TERM 163 376294 - 376323 + gH 81 -15.7 -3.01712 | gap 1, opp_overlap 376286 376287 AGCACAATGGGATCG CGTGG-GGCCGCCG CTG CGGCGGCCACCACC TCTTCAGCGAAGAGG trd_0372 376818 - 376940 + | hypothetical protein TERM 164 377083 - 377054 - TR 100 -16.5 -4.52589 | opp_overlap 377051, overlap 377055 CTGTCCGAGACAAAA TGAGCGACCTGGA ACAT TCCAGGTCGCTCC AGAATCGTTGGACTC TERM 165 377082 - 377055 - TR 100 -20 -3.31232 | opp_overlap 377051, overlap 377054 TGTCCGAGACAAAAT GAGCGACCTGGA ACAT TCCAGGTCGCTC CAGAATCGTTGGACT trd_0373 377581 - 377108 - | halocyanin precursor-like protein trd_0374 378350 - 377712 - | polysaccharide deacetylase trd_0375 378367 - 378576 + | hypothetical protein trd_0376 379072 - 378659 - | Domain of unknown function domain protein trd_0377 379449 - 379069 - | SUF system FeS assembly protein, NifU family trd_0378 380731 - 379472 - | cysteine desulfurase TERM 166 379594 - 379560 - G 72 -8.5 -4.02132 | overlap 379561 TTGTAAAGGTAGAAA CTGGCG-CGCGTCGTCG CCA CGACGCCGAGGCGCC-G CATCAAGGGTTGCGT TERM 167 380494 - 380474 - G 76 -13.9 -3.14931 | opp_overlap 380474 GCTAGCGCCGATGAA GCGCGCGAC TTT GGCGCGCGC TTCCTCATAGAGGAC TERM 168 380474 - 380494 + g 78 -13.9 -3.21099 | opp_overlap 380474 GCTAGCGCCGATGAA GCGCGCGAC TTT GGCGCGCGC TTCCTCATAGAGGAC TERM 169 380606 - 380570 - G 100 -24.6 -2.78384 | opp_overlap 380573, overlap 380573 GTTGCTCGTACGATA GAAGCCAGCGAGCGCC TCGAT GACGCTCGCTGGCTTC TGTGAGGTTGCCGCG TERM 170 380573 - 380603 + g 93 -18.3 -3.52192 | opp_overlap 380570 380573 GCTCGTACGATAGAA GCCAGCGAGCGCC TCGAT GACGCTCGCTGGC TTCTGTGAGGTTGCC TERM 171 380603 - 380573 - G 100 -20.5 -3.54475 | opp_overlap 380573, overlap 380570 GCTCGTACGATAGAA GCCAGCGAGCGCC TCGAT GACGCTCGCTGGC TTCTGTGAGGTTGCC sufD 382065 - 380728 - | FeS assembly protein SufD sufB 383536 - 382121 - | FeS assembly protein SufB TERM 172 383553 - 383610 + r 88 -11.3 -4.21439 | gap 1, overlap 383554 GCACGTTCCTCCTTA TGGTACGGCTCGGTCAGGAGGCCGCTTC CGC GAA-CTGCTCCTTGACCCAGTCGTACCC TTTCTCTTCGAGTTC TERM 173 383554 - 383609 + r 80 -14.8 -3.1214 | gap 1, overlap 383553 CACGTTCCTCCTTAT GGTACGGCTCGGTCAGGAGGCCGCTTC CGC GAA-CTGCTCCTTGACCCAGTCGTACC CTTTCTCTTCGAGTT sufC 384393 - 383566 - | FeS assembly ATPase SufC trd_0382 384897 - 384466 - | transcriptional regulator, Fur family trd_0384 385014 - 385484 + | NifU family protein trd_0383 385852 - 385481 - | hypothetical protein trd_0385 386487 - 385915 - | putative DNA polymerase III, epsilon chain (EC ) trd_0386 387188 - 386502 - | metallo-beta-lactamase domain protein trd_0387 388841 - 387231 - | Amidohydrolase family trd_0388 390470 - 388866 - | Amidohydrolase family trd_0389 390465 - 390638 + | hypothetical protein trd_0390 391527 - 390688 - | putative saccharide deacetylase, slightly trd_0391 392723 - 391527 - | cysteine desulfurase trd_0392 394118 - 392910 - | methionine gamma-lyase trd_0393 394095 - 394280 + | hypothetical protein trd_0394 394307 - 396139 + | putative ABC transporter, substrate binding protein (oligopeptide) TERM 174 396187 - 396136 - f 89 -14.5 -3.7732 | opp_overlap 396143 396181, overlap 396141 GCTGGATATCAAGAA GTAG-AGTGCACTGCTGGGCCGGGG TTTT CCCCGGCCCAGCAAC-CGCTTCTCC GGAGGGTTCTCATGC TERM 175 396181 - 396141 - f 88 -17.6 -3.03605 | gap 1, opp_overlap 396143, overlap 396136 ATATCAAGAAGTAGA GTGCACTGCTGGGCCGGGG TTTT CCCCGGCCCAGCAAC-CGC TTCTCCGGAGGGTTC TERM 176 396143 - 396181 + F 89 -16.7 -3.29461 | gap 1, opp_overlap 396141 396136 ATCAAGAAGTAGAGT GC-ACTGCTGGGCCGGGG TTTT CCCCGGCCCAGCAACCGC TTCTCCGGAGGGTTC TERM 177 396741 - 396751 + G 72 -6.8 -4.2349 | overlap 396738 GCTGGTGGTGATCGG GCTG AGC CAGC TTTTCGGTGTGAAGC trd_0395 396199 - 397209 + | oligopeptide transport system permease protein oppB trd_0396 397223 - 398212 + | oligopeptide transport system permease protein appC trd_0397 398369 - 398238 - | hypothetical protein TERM 178 398366 - 398396 + g 100 -12.4 -4.57073 | overlap 398369 398370 ACCTCAGCTCTTCCA CCACCCGCCGCCCC GCC GGGTCGGCGGATCG TTTTTCCGCCGCCTC TERM 179 398369 - 398393 + g 74 -12.7 -3.23708 | overlap 398366 398370 TCAGCTCTTCCACCA CCCGCCGCCCC GCC GGGTCGGCGGA TCGTTTTTCCGCCGC TERM 180 398370 - 398392 + H 77 -16.2 -2.53903 | overlap 398369 398366 CAGCTCTTCCACCAC CCGCCGCCCC GCC GGGTCGGCGG ATCGTTTTTCCGCCG thiD 398445 - 399278 + | phosphomethylpyrimidine kinase thiG 399271 - 400080 + | Thiazole biosynthesis protein ThiG thiE 400091 - 400759 + | thiamine-phosphate pyrophosphorylase thiE 400763 - 401389 + | thiamine-phosphate pyrophosphorylase thiS 401386 - 401592 + | thiamine biosynthesis protein ThiS trd_0403 402005 - 401646 - | putative 6-O-methylguanine DNA methyltransferase family protein trd_0404 402396 - 402010 - | hypothetical protein secA 402472 - 405117 + | preprotein translocase, SecA subunit trd_0406 405428 - 406129 + | glycerol uptake facilitator protein trd_0407 408200 - 406434 - | hypothetical protein TERM 181 408249 - 408214 - R 86 -16.2 -3.28791 | overlap 408215 408217 ACCGGCCTGCGAGAA CGATGCAGGGGCAGGT GAGC ACCTGCCCCTGTACCA CCGGCTCTACGACCG TERM 182 408248 - 408215 - R 83 -17.5 -2.57132 | overlap 408214 408217 CCGGCCTGCGAGAAC GATGCAGGGGCAGGT GAGC ACCTGCCCCTGTACC ACCGGCTCTACGACC TERM 183 408246 - 408217 - R 84 -16.5 -2.82623 | overlap 408215 408214 GGCCTGCGAGAACGA TGCAGGGGCAGGT GAGC ACCTGCCCCTGTA CCACCGGCTCTACGA trd_0408 408974 - 408270 - | Protein of unknown function (DUF461) family trd_0409 409597 - 408977 - | putative SCO1/SenC family protein trd_0410 410256 - 409609 - | hypothetical protein TERM 184 410165 - 410148 - G 71 -7.7 -4.08216 | gap 1, overlap 410149 GCAGGCGCGGCAAAA CGCGTGGC GCA GCCA-GCG CACTCCAGACGATCG trd_0411 410660 - 410304 - | lustrin A TERM 185 410675 - 410694 + r 75 -13.6 -2.92668 | opp_overlap 410689 CTGCCGACCCTACCT CGGTGCTG AACG CAGCACCG TCTCATTCAATGGTA trd_0412 411905 - 410967 - | Luciferase-like monooxygenase superfamily dapB 412797 - 412021 - | dihydrodipicolinate reductase dapA 413705 - 412797 - | dihydrodipicolinate synthase TERM 186 413623 - 413653 + gH 71 -14.1 -2.78384 | gap 1 TTGGCGATGAGCCAG TCGACGAGGTCGCG CAGT CGCGG-CTCGTCGA TCTCCTCACCAGCGA trd_0416 413704 - 413859 + | hypothetical protein trd_0415 413971 - 413849 - | hypothetical protein trd_0417 414807 - 414082 - | hypothetical protein trd_0418 416133 - 414826 - | putative glycosyltransferase TERM 187 414943 - 414920 - G 75 -9.4 -3.9712 | CGATGCCAGGAGAAA CGGAGCGCGG CCTG CCGAGCACCG ACTTGCAAGCGCGTG TERM 188 415333 - 415347 + g 74 -11.4 -3.62597 | opp_overlap 415326 GAAGAGGAGGAGCGG CTGGCG CGG CGCCAG TTCTTGCGCGATCCG TERM 189 416197 - 416176 - H 100 -8.7 -4.86731 | overlap 416191 GTGCCCGAAACAAAA CCACCGG AGGGGAAA CCGGTGG CGCGAGACTCGCGTG TERM 190 416475 - 416491 + H 100 -13.7 -5.4505 | CTCCCCGACTGCGGG GGCCGGT CGA ACCGGCC TTTTTTGTTCCAGGC selA 416518 - 417936 + | L-seryl-tRNA selenium transferase trd_0421 419779 - 417929 - | DNA primase trd_0423 420866 - 419784 - | deoxyguanosinetriphosphate triphosphohydrolase-like protein TERM 191 420492 - 420467 - G 91 -10.4 -4.66264 | overlap 420470 420481 GAAAACCGGGAAAAA CAGCGGCGAG AGCACG CTCGCCGGTG TGACCGAACGGCGTA TERM 192 420965 - 420936 - R 71 -12.1 -3.21395 | gap 1, opp_overlap 420959, overlap 420934 420937 420955 ATCGTTCGGAGAAGA GCGAGCCCCCGGCG CAA CAC-GGGGGCTCGT GGCGAGACTCGGTTG TERM 193 420964 - 420937 - R 77 -15.6 -2.52623 | gap 1, opp_overlap 420959, overlap 420936 420934 420955 TCGTTCGGAGAAGAG CGAGCCCCCGGCG CAA CAC-GGGGGCTCG TGGCGAGACTCGGTT trd_0424 422406 - 420997 - | putative aminomethyltransferase trd_0425 422786 - 422911 + | hypothetical protein trd_0426 422869 - 423045 + | hypothetical protein uvrC 423042 - 424919 + | excinuclease ABC, C subunit trd_0428 424916 - 425545 + | Sua5/YciO/YrdC/YwlC family protein trd_0429 425631 - 426896 + | putative UDP-glucuronosyltransferase trd_0430 426893 - 427753 + | hypothetical protein trd_0431 427750 - 428031 + | hypothetical protein trd_0432 428047 - 429399 + | ATPase, aaa family rph 429396 - 430127 + | ribonuclease PH hisB 430742 - 430134 - | imidazoleglycerol-phosphate dehydratase hisC 431848 - 430766 - | histidinol-phosphate aminotransferase trd_0436 431933 - 433027 + | beta-lactamase trd_0437 433028 - 433876 + | possible pseudouridine synthase cmk 433800 - 434546 + | cytidylate kinase trd_0439 434503 - 435264 + | Acyltransferase domain protein TERM 194 435577 - 435547 - T 70 -6.1 -4.25104 | gap 1 TCTGGCGGATCAAAA GCGT-GCACTGCCA AGGG CGGCAGCGCGACTC GTGGTCGCTCTACCA trd_0440 436961 - 435753 - | Domain of unknown function (DUF362) family TERM 195 437244 - 437203 - g 75 -10.7 -3.84719 | opp_overlap 437223 437237 AGGCCGAAACTGAAA CGCCCTCGATCGTTGCCGC AGCG GCGATCGCGATCGAGGCCG AAAGCGGGCGCGTGC trd_0441 437184 - 438695 + | penicillin-binding protein dacF precursor trd_0442 438760 - 439116 + | HspR trd_0443 439167 - 441779 + | chaperone clpB 1 TERM 196 441813 - 441786 - f 100 -21.4 -3.40403 | opp_overlap 441786 GTCGCTTGAGGAGAA CAGGGGATCGCC GGCT GGCGATCCCCTG TTTCGTTCGCCGCTG TERM 197 441786 - 441813 + F 100 -21.4 -3.90588 | opp_overlap 441786 GTCGCTTGAGGAGAA CAGGGGATCGCC GGCT GGCGATCCCCTG TTTCGTTCGCCGCTG trd_0444 441842 - 441970 + | hypothetical protein trd_0445 441988 - 442212 + | hypothetical protein trd_0446 442267 - 443244 + | hypothetical protein TERM 198 443322 - 443287 - T 100 -14.7 -4.59773 | overlap 443288 443289 CCCGATCGGGAAAAA TCTGCGACCCGCCAG GTGGTG CTGGCGGGCCGCAAG TAAGCAGAGGATCAG TERM 199 443321 - 443288 - T 93 -18.2 -3.35542 | overlap 443287 443289 CCGATCGGGAAAAAT CTGCGACCCGCCAG GTGGTG CTGGCGGGCCGCAA GTAAGCAGAGGATCA TERM 200 443320 - 443289 - T 89 -19.5 -2.61004 | overlap 443288 443287 CGATCGGGAAAAATC TGCGACCCGCCAG GTGGTG CTGGCGGGCCGCA AGTAAGCAGAGGATC trd_0447 444425 - 443334 - | putative Methionine synthase, vitamin-B12 independent TERM 201 444547 - 444512 - H 71 -10.4 -3.68325 | overlap 444513 CAGAGCTGAACAGAA CCGCTCGTGATCATCG TGAA CGATGCCCAGGAGCGA TGGTAGAGGGCGAGG trd_0448 444837 - 445871 + | alcohol dehydrogenase, class III TERM 202 446178 - 446202 + F 100 -20.1 -4.19735 | opp_overlap 446172 AGCCAGTAACGCCGG CGGGCAGAGGT GTC ACCTCTGCCCG TTTCGTTTTGCAGCG aroF 446227 - 447270 + | phospho-2-dehydro-3-deoxyheptonate aldolase trd_0450 448252 - 447272 - | hypothetical protein trd_0452 448375 - 449580 + | glycosyl transferases group 1 trd_0451 450359 - 449544 - | hypothetical protein trd_0453 450756 - 450364 - | hypothetical protein trd_0454 450964 - 450728 - | hypothetical protein trd_0455 451014 - 451928 + | malyl-CoA lyase trd_0456 452020 - 452238 + | hypothetical protein trd_0458 452280 - 452738 + | hypothetical protein trd_0457 453408 - 452695 - | redox-sensing transcriptional repressor rex TERM 203 453205 - 453225 + g 73 -12.5 -3.33696 | opp_overlap 453201 CTCGTGAATCAGCGC GGCCACGGC ATA GCCGTAGCC TTGCTTGCCGAAGCG trd_0459 455270 - 453510 - | glutamine-dependent NAD(+) synthetase TERM 204 456539 - 456502 - g 77 -13.4 -3.30441 | gap 1 GAGCATGCGCGAGAA TTGAGCGCACG-GCGGC GTGCA GCCGCACGGGCGCTCGA GCAGGCGATGAGTGC recN 455404 - 457146 + | DNA repair protein RecN trd_0461 457207 - 457512 + | conserved hypothetical protein TIGR00103 TERM 205 457599 - 457618 + G 74 -11.4 -3.57144 | GATCGAACTGGCCGA GCGGCTCG GCTT CGAGTCGC TTTGGCGATCGGACC trd_0462 457522 - 458490 + | putative oxidoreductase TERM 206 458481 - 458539 + T 100 -17.4 -4.1711 | gap 2, opp_overlap 458463 458462 458493 GCCCGCCGTCGCGGA CGCGGC--ATGACAGGCGGCGTGGGGGG CTGAT CCCCCCACGCCGCCCGAGATCGGCCGAG TTTATTCGAGGTGCT TERM 207 458525 - 458493 - T 100 -27.8 -2.78816 | opp_overlap 458481 GGACGCGGCATGACA GGCGGCGTGGGGGG CTGAT CCCCCCACGCCGCC CGAGATCGGCCGAGT trd_0463 460119 - 458554 - | flavin containing amine oxidase TERM 208 459597 - 459587 - G 85 -5.4 -5.00616 | TCGCTCTCGAAAAAA GTGT CCA ACAC TTCAGCGATACTCTT TERM 209 460450 - 460424 - R 100 -20.2 -4.72272 | TGCTGCGAGCAAAAA GAGCACCCGGCC AGT AGCCGGGTGCTC AGCATCTAGCGAGGA trd_0464 461069 - 460476 - | putative cytochrome c subfamily TERM 210 461036 - 460995 - G 72 -13 -3.14132 | opp_overlap 460995, overlap 460976 CGCGCTCCCGAGCAA CGCCAGCGCCGTGC-CGGCC AGGA GGCCGAGCACGAGGC-GACG TGCGGTTTTCGAGCG trd_0465 461632 - 461093 - | hypothetical protein trd_0466 463039 - 461666 - | probable molybdopterin oxidoreductase, membrane subunit trd_0467 464479 - 463085 - | hypothetical protein TERM 211 463410 - 463384 - G 75 -10.8 -3.84406 | TCCCGAGGAGAACAA TCGCGGCAACGA CAG TCGGTCCCGCGA TGCTGCGGCGAATGG trd_0468 465234 - 464509 - | oxidoreductase, iron-sulfur cluster-binding subunit trd_0469 467526 - 465271 - | putative 4Fe-4S ferredoxin, iron-sulfur binding trd_0470 468100 - 467567 - | chaperone protein HtpG trd_0471 468449 - 468159 - | hypothetical protein TERM 212 468973 - 468999 + G 86 -10.2 -4.25104 | gap 1 TGGTGGCTAGCGATG CGAGCGC-TGC AGTTGC GCAAGCGCTCG TTTTCATCCGAGCCG trd_0472 468663 - 469055 + | hypothetical protein trd_0473 471022 - 469082 - | hypothetical protein TERM 213 469159 - 469179 + g 72 -11.1 -3.53012 | TTCGGAGCACTGACT CGATGGTCC TGC GGACCCTCG TTTCGGGAAGCCAAG TERM 214 469208 - 469237 + g 84 -8.5 -4.56597 | AGCGACGAGCGTCGT GTCGTCGAGAGGG GTGA TCGACTCGACGAC TTTTTCGAGGAGCGC trd_0474 472387 - 471206 - | hypothetical protein TERM 215 472348 - 472388 + g 86 -14 -3.81287 | ACTCAGTATATCTGC CGTGCACGGAAGCGAGCA AGTGC TGTTCGTCACCGTGCACG TTTCGTCGTGCTATG trd_0475 473826 - 472399 - | hypothetical protein TERM 216 473145 - 473160 + g 71 -10.4 -3.56099 | CCGGGCTCCTGACGG GACGGC CCCA GCCGTC TTTGCCGCCGTTATA trd_0476 474162 - 475004 + | transketolase trd_0477 475001 - 475963 + | Transketolase, pyridine binding domain protein rpiA 475966 - 476679 + | ribose 5-phosphate isomerase A trd_0480 476967 - 478361 + | LysM domain protein trd_0479 478855 - 478358 - | putative integral membrane protein trd_0481 478881 - 479021 + | hypothetical protein TERM 217 480046 - 480056 + G 77 -8.2 -4.2828 | overlap 480044 TCTCGTCCCGGGTCG GCGG GCG CCGC TTTTGGTCCGTGAGA trd_0482 479213 - 480406 + | NAD(P) transhydrogenase subunit alpha part 1 trd_0483 480403 - 480756 + | NAD(P) transhydrogenase, alpha-2 subunit TERM 218 481103 - 481135 + G 81 -15.6 -2.95656 | gap 1, overlap 481095 CGAGTTCCAGCGGTT CG-TCGCCAGCGGAG CAGT CACCGCTGGCGAGCG TGTGTCCGTTGCCTT trd_0484 480753 - 482156 + | NAD(P) transhydrogenase, beta subunit trd_0485 482514 - 482356 - | hypothetical protein trd_0486 482607 - 483002 + | hypothetical protein trd_0487 483080 - 484351 + | carboxyl-terminal processing protease trd_0488 484378 - 484782 + | hypothetical protein trd_0489 484795 - 485535 + | uncharacterized proteins, LmbE homolog TERM 219 485662 - 485686 + F 78 -4.1 -4.7373 | overlap 485658 485665 485666 485685 GAATGCTTCCTCTCG CCAGCGGGGCG AAT CGCTTCGGTCG TTTTTGCTCGCCTGG TERM 220 486315 - 486333 + G 73 -9.6 -3.86822 | CCTGCGTCACGTGGC GATCGTTG CGG CAGCGATC TTTGTCCCGGCATTC trd_0490 485878 - 486864 + | hypothetical protein trd_0491 486861 - 487697 + | putative undecaprenol kinase trd_0492 489337 - 487703 - | putative transport protein TERM 221 488881 - 488858 - G 77 -13.2 -3.41051 | CCAGCGCCACGAGAA GTCGGTGGTC AGCC AACCACCGAC CAGCGGCCCGAGCGC trd_0493 489910 - 489566 - | protein csaA trd_0494 489981 - 490727 + | hydrolase, NUDIX family protein TERM 222 490842 - 490896 + T 100 -28 -3.18274 | overlap 490844 490846 CTCCTGACATTGGGG CACCGTCCGAGCGCGAGGGAGCTCGT GCA ACGAGCTCCTTCGCGCTCGGACTCTC TTGGCTTCGGATAAC TERM 223 490844 - 490894 + T 100 -30.6 -3.15354 | overlap 490842 490846 CCTGACATTGGGGCA CCGTCCGAGCGCGAGGGAGCTCGT GCA ACGAGCTCCTTCGCGCTCGGACTC TCTTGGCTTCGGATA TERM 224 490846 - 490892 + T 100 -37.6 -3.1352 | overlap 490844 490842 TGACATTGGGGCACC GTCCGAGCGCGAGGGAGCTCGT GCA ACGAGCTCCTTCGCGCTCGGAC TCTCTTGGCTTCGGA aceB 492486 - 490918 - | malate synthase A TERM 225 491425 - 491373 - G 71 -7.6 -4.1899 | opp_overlap 491418 GGACGCGATCGAAAA CTTCGAGCGCGACG-GGGACGAGGTC AGG GTGCGCGACCCACGTCCCG-TCGAAG CCGTCCTTGGCTTCC TERM 226 492583 - 492548 - R 100 -19.8 -4.78572 | overlap 492570 492571 GTGTAACGAAGAAAA GCCGGGATGCGGAGTT CGGA AACCCTGCATCCCGGC AGGAGAACGACTCAG trd_0496 493773 - 492595 - | isocitrate lyase TERM 227 493157 - 493145 - G 71 -9.1 -3.80573 | opp_overlap 493125 493123 GCGATGATGACGAAA TCGGG ATT CCCGA GATCGTTGGCCACTG TERM 228 494129 - 494154 + G 75 -4 -4.63527 | gap 1, overlap 494130 CGGCAGCTCCAGGTG TTCCGGT-CCG TGGCT CGGCATCGGAG TTTTTCGCGTGCTGC trd_0497 494099 - 494998 + | RuBisCO operon transcriptional regulator trd_0498 495841 - 495002 - | Protein of unknown function superfamily trd_0499 496153 - 495863 - | hypothetical protein trd_0501 497077 - 498597 + | P49 secreted protein TERM 229 498815 - 498842 + F 91 -17.8 -3.21099 | gap 1, opp_overlap 498812 498801, overlap 498818 ACTTCGACCGAACCT GAACCCGGG-GGC TTT GCCACCCGGGTTC TTCGTCATGGGCGAC TERM 230 498818 - 498839 + F 86 -13.7 -3.75024 | gap 1, opp_overlap 498812 498801, overlap 498815 TCGACCGAACCTGAA CCCGGG-GGC TTT GCCACCCGGG TTCTTCGTCATGGGC ribD 498859 - 500007 + | riboflavin biosynthesis protein RibD ribE 500004 - 500672 + | riboflavin synthase, alpha subunit TERM 231 501410 - 501433 + G 71 -12.4 -3.17901 | CATGGGGATGTCAGT GGGGACGAGC CGGT GCTCGTCCGC TTGCATTCGGAGTGT trd_0504 500669 - 501922 + | riboflavin biosynthesis protein ribA ribH 501919 - 502434 + | 6,7-dimethyl-8-ribityllumazine synthase trd_0506 503041 - 504690 + | serine-type D-Ala-D-Ala carboxypeptidase trd_0507 505607 - 504765 - | MitC TERM 232 505107 - 505093 - GT 78 -4.2 -4.81249 | GCCCAAACGGAAAAA CCTCGT TCG ACCAGG CGTGTACCGAGCAGA TERM 233 505326 - 505362 + gT 76 -14.4 -3.13403 | gap 1, opp_overlap 505323 505326, overlap 505324 CGGGACATCGAACCA GTGTGCCGTCGC-CCCG AGTT CGGCAGCGGCGGCACGC TCTTCCTCGCGCCGC TERM 234 505450 - 505438 - GT 71 -7.7 -4.15044 | TGCTGCGCGAAGAAA CTGAG CGG CTCAG ATGGCTCTCCGCCGA selB 507474 - 505582 - | selenocysteine-specific translation elongation factor TERM 235 506486 - 506462 - GH 89 -15 -3.78775 | CGGCGGATGATGAAA CGGTCGCCGC GCACG GCGACGACCG GCTCCTGAAGGCGCA trd_0510 507559 - 508482 + | putative amidase trd_0509 510500 - 508437 - | Protein of unknown function, DUF255 family trd_0511 510499 - 510849 + | hypothetical protein TERM 236 511024 - 510991 - fH 100 -22.5 -3.25823 | opp_overlap 510992, overlap 510992 510994 GGGCGCCCACACCAA CCACCGAGCCGGCCT CATC AGGCCGGCTCGGTGT TTTCTCGGGTATCCT TERM 237 510992 - 511023 + FH 100 -26 -4.41548 | opp_overlap 510991 510992 510994 GGCGCCCACACCAAC CACCGAGCCGGCCT CATC AGGCCGGCTCGGTG TTTTCTCGGGTATCC TERM 238 511023 - 510992 - fH 100 -26 -2.55351 | opp_overlap 510992, overlap 510991 510994 GGCGCCCACACCAAC CACCGAGCCGGCCT CATC AGGCCGGCTCGGTG TTTTCTCGGGTATCC TERM 239 511021 - 510994 - fH 100 -22.8 -2.81547 | opp_overlap 510992, overlap 510992 510991 CGCCCACACCAACCA CCGAGCCGGCCT CATC AGGCCGGCTCGG TGTTTTCTCGGGTAT TERM 240 511369 - 511410 + G 93 -11.5 -4.66833 | opp_overlap 511359, overlap 511373 ATCGAGGGGAAGCCC GTGACGTTCACGGTCTACC GGGA GGTCGGCCGTGGGCGCTAC TTTTTGCCCTTCCGG trd_0512 511057 - 511686 + | hypothetical protein trd_0513 511688 - 513181 + | PepB protein trd_0514 513178 - 513603 + | conserved hypothetical protein TIGR00149 trd_0515 513593 - 513943 + | possible DNA binding protein trd_0517 513967 - 514854 + | 3-mercaptopyruvate sulfurtransferase trd_0516 515475 - 514849 - | methyltransferase, UbiE/COQ5 family trd_0518 515563 - 516075 + | hypothetical protein trd_0519 516100 - 516717 + | uncharacterized domain HDIG protein TERM 241 516756 - 516726 - T 75 -14.1 -2.97925 | gap 1, opp_overlap 516729 AGGTTAGAGGACAGA CGAGGGGCATTCCC TTGA AGG-ATGCCCCTCG TGTCGCGACCGCACA trd_0520 518038 - 516833 - | spermidine/putrescine-binding periplasmic protein precursor trd_0521 518914 - 518054 - | ABC-type spermidine/putrescine transport system, permease component II TERM 242 518875 - 518862 - G 93 -3.7 -5.28942 | CACCCGAAAGAAAAA CGGCG TTTG CTCCG CATCGTCGTCGCTGG trd_0522 519825 - 518911 - | spermidine/putrescine transport system permease protein potB trd_0523 521013 - 519844 - | ATP-binding component of putrescine transport system TERM 243 520758 - 520805 + g 86 -9.8 -4.56597 | gap 1 CCTCGATGAGTACCT CGCCCGCGCT-CGGATGCTCGAA CCC TGCGATCATGCGTAGCGTGGTCG TTTTTCCGCAGCCCG trd_0524 522469 - 521015 - | folylpolyglutamate synthase trd_0525 522541 - 523770 + | hypothetical protein TERM 244 523825 - 523812 - f 70 -8.1 -4.05788 | GGTTGCGAAAGGAAA GTGCC AAAT GGCAC GGATGGGAGAACCCG trd_0526 523845 - 524936 + | Mrp trd_0527 525008 - 526384 + | 3-oxoacyl-(acyl-carrier-protein) synthase II TERM 245 526418 - 526437 + G 81 -9.2 -4.26903 | overlap 526419 GGCTATGCTCCGGTG AGCGGGCT CGAG AGCCCGCG TTTTGCTGGAATCCG TERM 246 526419 - 526436 + G 72 -12.7 -3.1582 | overlap 526418 GCTATGCTCCGGTGA GCGGGCT CGAG AGCCCGC GTTTTGCTGGAATCC trd_0528 526394 - 527350 + | putative agmatinase trd_0529 527406 - 528380 + | putative agmatinase trd_0530 528355 - 528993 + | putative aminomethyltransferase protein trd_0531 530700 - 529000 - | urease alpha subunit ureB 531098 - 530709 - | urease, beta subunit ureA 531391 - 531095 - | urease, gamma subunit trd_0534 531729 - 531388 - | hypothetical protein trd_0535 532022 - 531774 - | DNA binding domain, excisionase family protein trd_0536 532392 - 532535 + | hypothetical protein rpsU 532651 - 532875 + | ribosomal protein S21 TERM 247 532940 - 532983 + G 100 -21.2 -4.41047 | gap 1, opp_overlap 532934, overlap 532948 CTGGGAAAGTTTGAT GCGCCAGACGTGGCTGTTGCC GGT GGCAACAGCCACGT-TCGTGC TTTTCGTTGCCGGGT TERM 248 532948 - 532976 + G 100 -23.3 -3.39207 | opp_overlap 532934, overlap 532940 GTTTGATGCGCCAGA CGTGGCTGTTGCC GGT GGCAACAGCCACG TTCGTGCTTTTCGTT trd_0538 532938 - 533237 + | hypothetical protein trd_0539 534122 - 533457 - | TENA/THI-4 family trd_0540 534782 - 534138 - | TENA/THI-4 family trd_0541 535094 - 535222 + | hypothetical protein trd_0542 535360 - 536136 + | glucose-1-phosphate thymidylyltransferase argS 536149 - 538299 + | arginyl-tRNA synthetase trd_0544 539773 - 538319 - | probable transcription regulator trd_0545 539911 - 539789 - | hypothetical protein dcd 539928 - 540521 + | deoxycytidine triphosphate deaminase trd_0547 541067 - 540528 - | putative ATP:cob(I)alamin adenosyltransferase trd_0548 541949 - 541089 - | ABC-2 type transporter superfamily trd_0549 542192 - 541971 - | multidrug ABC transporter, ATP-binding protein TERM 249 542228 - 542201 - R 100 -17.7 -4.13654 | CCTGCAAACCACAAA CCCCCGCCGGC GACCTG GCCAGCGGGGG TACTCGATCGGCTAC trd_0550 545306 - 542961 - | hypothetical protein TERM 250 545327 - 545351 + r 100 -17.2 -4.19746 | CCTCCATTCGGTTGG CGGCCAAGGG GGTTA CCCTTGGCCG TTGTTTTGCAGTCAG trd_0551 545741 - 545370 - | hypothetical protein TERM 251 545760 - 545788 + r 93 -18.9 -3.10164 | CCTCCTTTGGTTCGA CCGACCCGGTGGT GGC AGCACCGGGTCGG TTCAGTCATCCGTCC trd_0552 545972 - 545790 - | hypothetical protein TERM 252 546018 - 545990 - R 93 -20.3 -2.71011 | opp_overlap 545983 545982 ACCTCCTTGCAACGA CTGGACCCCGGTC ATC GACCGGGGTCCTG CAATTGACCTTCTAC trd_0553 547323 - 546244 - | putative integrase trd_0554 548336 - 547416 - | ABC-type multidrug transport system, ATPase component TERM 253 548797 - 548820 + H 72 -11 -3.46602 | GCTGGACAGCGTGAC GCTGATGGGC GGGG GCGCATCAGC TTCTGCTGTGGCAAG TERM 254 549215 - 549243 + GH 74 -4.6 -4.4648 | overlap 549217 549220 CGCCTGGTTTGCACT GC-TCGTCGTTGGC GGA GCCAACG-CAATGC TTTTCTGGTCGAGCT trd_0555 549180 - 549476 + | hypothetical protein TERM 255 549475 - 549507 + GF 79 -6.1 -4.60487 | opp_overlap 549474 549472 549477, overlap 549477 GCCGGTCAGAAAGAT GAGCGATCCGAGCAG CAT CCGGTCGGAACGCTG TTTTTGACCCTGCTC trd_0556 549448 - 549585 + | hypothetical protein trd_0557 549589 - 550056 + | cytochrome c oxidase (bo3-type) subunit II trd_0558 550053 - 551741 + | cytochrome c oxidase subunit 1 TERM 256 551764 - 551788 + T 100 -21.5 -4.43642 | ACGTGCGACGGTCGA GGGGCGGTGAG CAA CTCACCGCCCC TTTCTTCATTATTTT trd_0559 553639 - 552014 - | probable acetolactate synthase large subunit TERM 257 552636 - 552646 + g 76 -2.4 -4.93365 | CGCAGTTCCGCCCGT CGCG AGT CACG TTTTTGGTTATAGAG trd_0560 554698 - 553862 - | hydrolase, alpha/beta fold family TERM 258 554602 - 554649 + g 75 -7.5 -4.28361 | gap 1, overlap 554603 CGAGCACGCCGTGAA GGGCG-AGGATCGGCGGGCCGG CCGAT CCGACCCGCCGCTCGTACGCGA TTTTGGTGCCGTTCG sucB 556023 - 554704 - | 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase sucA 558941 - 556044 - | 2-oxoglutarate dehydrogenase, E1 component TERM 259 558114 - 558140 + g 77 -12.2 -3.57263 | opp_overlap 558068 CAGCACGTTCAGGCG GCCGCGATGCGC CAT GCCCATCGCGAC TTTCGGGATACCCGT TERM 260 558690 - 558652 - G 71 -7.3 -4.08767 | gap 1, overlap 558657 GCGACCTTCGTAAAA TCGAATGCCGGCC-CTGC GATC GCAGCGGCCGGCGACGGA GCAGCGAGCTGCTCG TERM 261 558685 - 558657 - G 73 -12.4 -3.36823 | gap 1, overlap 558652 CTTCGTAAAATCGAA TGCCGGCC-CTGC GATC GCAGCGGCCGGCG ACGGAGCAGCGAGCT trd_0563 560273 - 559017 - | putative FAD binding domain TERM 262 561124 - 561159 + G 71 -11.8 -3.18582 | TTCGAACTCGCGCGC CTCGCCGAACTCCTCG GCGA CGAGACGTTCGGGGAG TTCCTGGCTGAGCTG TERM 263 561750 - 561784 + G 76 -14.3 -3.12351 | opp_overlap 561752 CGAAGTGACGGAAGA CATCGAGCGGTTGGG TGGTT CGCAACCGCTCGAGG TTCCGTATACCCGGG TERM 264 561782 - 561752 - g 82 -15.5 -3.11088 | opp_overlap 561750 AAGTGACGGAAGACA TCGAGCGGTTGGG TGGTT CGCAACCGCTCGA GGTTCCGTATACCCG mgtE 560974 - 562332 + | magnesium transporter trd_0565 562388 - 563326 + | Zn-dependent hydrolase TERM 265 564490 - 564502 + G 73 -5.5 -4.37886 | CTGGTACTGGAGATC GCAGC ATT GTTGC TTTTCTGGGGACTGG trd_0566 563323 - 564564 + | hypothetical protein trd_0568 564605 - 564730 + | hypothetical protein trd_0567 566438 - 564693 - | PHP domain protein trd_0569 567214 - 566444 - | hypothetical protein trd_0570 569280 - 567553 - | hypothetical protein TERM 266 568779 - 568826 + g 95 -14.8 -4.1043 | gap 1, overlap 568823 ACGCTGCCCAGCGGC CGTTGGCGCGTGGCCCGGAACGG ATA CCGGTCTCGGCCA-GCGTCCACG TTTCTCGTGTTTCGA arcC 570361 - 569414 - | carbamate kinase trd_0572 571818 - 570358 - | Protein of unknown function (DUF1116) superfamily TERM 267 570719 - 570734 + g 77 -11.8 -3.68351 | opp_overlap 570719 570720 CCAGCGAGTGCGAAA CCGCCG AAAC CGGCGG TTTCGGTGATCGCGC TERM 268 570734 - 570719 - G 77 -11.8 -3.57792 | opp_overlap 570719, overlap 570720 CCAGCGAGTGCGAAA CCGCCG AAAC CGGCGG TTTCGGTGATCGCGC trd_0573 573385 - 571841 - | protein fdrA TERM 269 573460 - 573418 - RH 100 -7.7 -5.30616 | gap 1, opp_overlap 573422 573424, overlap 573420 573422 TGATGGAAAGAAAAA GCGACCCGGCCAACCTGG TTGTCTGC CCAGGCTGGCCGT-TCTC CTGTGACCCGCTTGT TERM 270 573424 - 573455 + rH 78 -13 -3.46602 | opp_overlap 573422 573420 573418, overlap 573422 AAAGAAAAAGCGACC CGGCCAACCTGG TTGTCTGC CCAGGCTGGCCG TTCTCCTGTGACCCG TERM 271 573519 - 573543 + rH 70 -14.3 -2.63858 | overlap 573518 GAACGAGCGTCGTTT CGGGCGACGTT GAC AACGTCGACCG CTTCTGACTATACTC TERM 272 573575 - 573606 + rH 81 -8 -4.56597 | gap 1, opp_overlap 573579 GGACGTCGTCGGAAG GC-AAGAGGAGCTCG CGG TGGGCTCCTCTCCGC TTTTTCGGCACGGAA trd_0575 574644 - 573793 - | hypothetical protein trd_0576 574627 - 574749 + | hypothetical protein trd_0577 574761 - 575645 + | carbon monoxide dehydrogenase medium chain trd_0578 575642 - 576136 + | aldehyde oxidase small subunit trd_0579 576156 - 578531 + | oxidoreductase, large chain trd_0580 578641 - 579435 + | putative polyketide cyclase trd_0581 579488 - 580309 + | putative polyketide cyclase TERM 273 580796 - 580808 + G 90 -7.7 -4.91712 | GTTTTGCTGGAGAGG CCCAA CGA TTGGG TTTTTATGGCTTCGG trd_0582 580312 - 581298 + | NAD-dependent alcohol dehydrogenase trd_0583 583921 - 581300 - | cation-transport ATPase, E1-E2 family trd_0584 584455 - 584210 - | putative 4-hydroxybenzoyl-CoA thioesterase trd_0585 584694 - 584572 - | hypothetical protein TERM 274 585005 - 585028 + r 72 -11.7 -3.484 | CGGAGGTCGAGCGGC GCGGCTCCC TGGGGT GGGAGCTGC TTCTCGTGTGATCGG TERM 275 585424 - 585413 - R 74 -2.2 -4.74103 | opp_overlap 585422, overlap 585415 CGCGGAACTGAAAAA CAGC CGCG ACTG GGTTTCCAGTCGTCT TERM 276 585510 - 585520 + r 100 -2.4 -5.72207 | opp_overlap 585484, overlap 585484 GCGCGCAGCCGGCAC AGCG TTT CGCG TTTTTTTGCTTTCAC TERM 277 585608 - 585598 - R 71 -4 -4.48987 | overlap 585593 TGTGGACAAGGAAAA TGAA ATT TTCA CCGGTGTCTCAGGCT trd_0588 585812 - 585669 - | hypothetical protein trd_0589 585992 - 585837 - | putative integrase TERM 278 586544 - 586592 + r 71 -14.3 -2.66316 | opp_overlap 586555, overlap 586541 TTTACGCGACGGCTC GCCGCCCAAAAGGGGGCTGCGCG ACT CGCGCAGCGCCCGCTGTGGCTGC TCGTGTCATGCCAAA TERM 279 586581 - 586555 - R 100 -19.4 -4.07568 | opp_overlap 586544 586541 GCTCGCCGCCCAAAA GGGGGCTGCGCG ACT CGCGCAGCGCCC GCTGTGGCTGCTCGT trd_0590 586717 - 586598 - | hypothetical protein trd_0591 587173 - 587027 - | hypothetical protein trd_0592 587156 - 587275 + | hypothetical protein trd_0594 587337 - 587756 + | cytochrome oxidase subunit II TERM 280 587840 - 587869 + F 81 -16.5 -2.71593 | opp_overlap 587839, overlap 587837 587836 GCCTTCCCACAGTAC GGGTGGCCAGC GCTTTCCA GCTGGCCACCC TAAGTTTGTCGCTCT nadC 588180 - 589196 + | nicotinate-nucleotide pyrophosphorylase nadA 589216 - 590139 + | quinolinate synthetase complex, A subunit trd_0597 591450 - 590386 - | putative pyrimidine precursor biosynthesis enzyme trd_0598 592222 - 591464 - | ABC transporter, permease protein trd_0599 593018 - 592212 - | ABC transporter, ATP-binding protein TERM 281 592580 - 592566 - G 71 -4.2 -4.57073 | opp_overlap 592571, overlap 592567 CAGCGTGCGCAAAAA CGCC GCGCGCT GGCG CATGCCGCCCGAGAG trd_0600 593468 - 593680 + | hypothetical protein trd_0601 594189 - 594566 + | hypothetical protein TERM 282 594628 - 594579 - T 73 -12.1 -3.30771 | gap 1, opp_overlap 594583, overlap 594581 594582 TGACATTGTCGAGAA GAC-GCGCTCGGCCCGGGACGG AGTGGTA CCCTCCCGGACCGAGCGTTGTT CACCGGGCGCGCAAG TERM 283 594625 - 594581 - T 83 -14.9 -3.22102 | opp_overlap 594583, overlap 594579 594582 ACATTGTCGAGAAGA CGCGCTCGGCCCGGGACGG AGTGGTA CCCTCCCGGACCGAGCGTT GTTCACCGGGCGCGC TERM 284 594624 - 594582 - T 86 -18.4 -2.5294 | opp_overlap 594583, overlap 594581 594579 CATTGTCGAGAAGAC GCGCTCGGCCCGGGACGG AGTGGTA CCCTCCCGGACCGAGCGT TGTTCACCGGGCGCG TERM 285 594583 - 594623 + T 100 -19.7 -3.61398 | opp_overlap 594582 594581 594579 ATTGTCGAGAAGACG CGCTCGGCCCGGGACGG AGTGGTA CCCTCCCGGACCGAGCG TTGTTCACCGGGCGC trd_0602 595017 - 594628 - | hypothetical protein TERM 286 594889 - 594933 + g 73 -9.2 -3.86916 | opp_overlap 594898 CTGGCCGACGTTCTT GGCGACGAAGCGGACTTTCC CAGCA GGAACTTCCGCCTTGTCGAC TTTGATGTAATACTC trd_0603 596314 - 595403 - | ribonuclease Z TERM 287 596610 - 596621 + G 75 -3.6 -4.79223 | overlap 596604 596602 CACATGTGCTCGCTC GGCG GCGA TGCC TTTTTCCTCATCTGG ggt 596427 - 598025 + | gamma-glutamyltransferase trd_0605 598514 - 598029 - | hypothetical protein TERM 288 598626 - 598588 - H 89 -18.2 -2.82516 | gap 1, overlap 598590 GCCGCTACGAGCATA CACCA-GCGGGCGCCGG AACGGA CCGACGCCCGCACGGTG AGGTGGGGGATGGGT TERM 289 598624 - 598590 - H 79 -15 -2.96216 | gap 1, overlap 598588 CGCTACGAGCATACA CCA-GCGGGCGCCGG AACGGA CCGACGCCCGCACGG TGAGGTGGGGGATGG trd_0607 598919 - 600121 + | hypothetical protein trd_0606 601149 - 600118 - | hydrogenase expression/formation TERM 290 600272 - 600293 + g 75 -12.3 -3.55444 | opp_overlap 600272 TCGTGCTGCGCTAAA GTGTCGAGC GCGT GCTCGACGC TTTCCGGCGTGACGA TERM 291 600622 - 600565 - G 78 -4.1 -4.82901 | gap 2, overlap 600569 CGGCTCGTACAAAAA GCGACGGCAG-CGAGCGAGCAGAT-CT TGGTCG AGCATCCGCTCGAGCGTCTGGCGGCAC TCGCGTGCGAGGAGA trd_0608 602281 - 601154 - | 6-phosphofructokinase 1 proS 602437 - 603891 + | prolyl-tRNA synthetase TERM 292 603940 - 603914 - T 93 -13.7 -4.18018 | opp_overlap 603913 603916 TTGTTCGAGCCAAAA GAGGGCCGGGA TGCAC TGCCGGCCCTC ATGTGTCTGACTGAC TERM 293 604392 - 604411 + T 73 -13.6 -2.80016 | overlap 604390 CCTCCACATGCCAGA TGCAGGGC CGAA GCCCTGCA TACTTACTGGTACGC rpe 605437 - 604730 - | ribulose-phosphate 3-epimerase trd_0614 605537 - 606571 + | putative molybdopterin biosynthesis protein trd_0615 606609 - 607355 + | FHA domain protein trd_0616 607365 - 607817 + | ABC transporter ATP-binding protein trd_0617 608032 - 609783 + | hypothetical protein trd_0619 609780 - 610661 + | probable dolichol-phosphate mannosyltransferase-putative membrane bound sugar transferase involved in LPS biosynthesis trd_0618 610957 - 610649 - | DUF167 trd_0620 611793 - 610954 - | conserved hypothetical protein TIGR00268 trd_0622 611886 - 612878 + | hypothetical protein trd_0623 615320 - 612948 - | polyribonucleotide nucleotidyltransferase TERM 294 614175 - 614201 + g 95 -18.2 -3.86781 | opp_overlap 614198, overlap 614196 CATGTAGCGCTTGGT TTCCTCGATTCC CAG GGAATCGAGGAA TTGTTCCTCTTCTTT TERM 295 614196 - 614210 + g 72 -8.6 -4.0825 | opp_overlap 614198, overlap 614175 GATTCCCAGGGAATC GAGGAA TTG TTCCTC TTCTTTGGTTCCCAG TERM 296 614543 - 614601 + g 72 -2.9 -4.65916 | opp_overlap 614548, overlap 614556 TCTTGTCTGGATTGA AGACAGCCTCACGCAGCCGATCACCGA GATAG TCGGCGATCTGCTGTTTGAGCTCGACA TTTTCTTGCGGTGGC TERM 297 614556 - 614588 + g 77 -12 -3.60475 | opp_overlap 614548, overlap 614543 GAAGACAGCCTCACG CAGCCGATCACCGA GATAG TCGGCGATCTGCTG TTTGAGCTCGACATT TERM 298 615188 - 615205 + g 74 -11.3 -3.57144 | opp_overlap 615200 GTTTTGCGCCGACCA CCGTCGT CAAG ACGACGG TTTCGCCGTAGCGCA TERM 299 615421 - 615391 - R 87 -18.4 -2.70932 | overlap 615393 CGCTCGCTGCAATGA GATGGCCCAGGG GACAACA CCCTGGGCCATC GCGAGAAGGCACGGA TERM 300 615419 - 615393 - R 77 -15.2 -2.90075 | overlap 615391 CTCGCTGCAATGAGA TGGCCCAGGG GACAACA CCCTGGGCCA TCGCGAGAAGGCACG rpsO 615781 - 615512 - | ribosomal protein S15 TERM 301 615871 - 615899 + r 78 -13.2 -3.46285 | opp_overlap 615854 615866 615865, overlap 615865 615898 CACGGAGAAGGGCAT GGGGTATTCGAC CGCTC GCCGAATACCCC TTCCTGTTTCCGGTG ilvC 616932 - 615925 - | ketol-acid reductoisomerase ilvN 617505 - 616978 - | acetolactate synthase, small subunit TERM 302 617224 - 617254 + g 75 -7.7 -4.2828 | gap 1 GTCCGTCGCTGTGAC CTTGA-TCAAGGCG AGTT CGCGTTGAATCAAG TTTTCGTCCGTCACA ilvB 619271 - 617499 - | acetolactate synthase, large subunit, biosynthetic type TERM 303 619301 - 619271 - G 100 -22.7 -2.87683 | opp_overlap 619264 619265 619261 ACAGTCGTCGATACA TCGCGAGCCTCCC GCTGG GGGAGGCTCGCGA GACGCTTCGTTCCTT trd_0628 619401 - 619514 + | hypothetical protein trd_0629 620384 - 619803 - | hypothetical protein TERM 304 620656 - 620646 - g 74 -2.4 -4.76041 | GACAGCGAGCAAAAA GCCG TGT CGGG AAGCGGAGCCGGGAA trd_0630 620629 - 620760 + | hypothetical protein trd_0632 620862 - 621566 + | KDP operon transcriptional regulatory protein kdpE trd_0631 621678 - 621556 - | hypothetical protein trd_0633 622602 - 622342 - | hypothetical protein trd_0634 622794 - 623711 + | serinethreonine phosphatase TERM 305 624018 - 624036 + G 79 -10.3 -4.07568 | ACCATCGCTCGGCTC CTGCGGA GGCGG TCCGCAG TTTTGCGGCCGGGGC TERM 306 624441 - 624459 + G 90 -11 -4.37092 | TTGCGAGCGACTTTC CGGTCTTG AAG CAAGGCCG TTTTCTCGAACGAGT trd_0635 623708 - 624580 + | Amidohydrolase family ruvA 624577 - 625152 + | Holliday junction DNA helicase RuvA hisD 626500 - 625154 - | histidinol dehydrogenase hisG 627516 - 626497 - | ATP phosphoribosyltransferase trd_0639 628963 - 627521 - | histidyl-tRNA synthetase pheT 631413 - 628960 - | phenylalanyl-tRNA synthetase, beta subunit TERM 307 630353 - 630303 - G 86 -14.1 -3.72576 | gap 2, overlap 630332 CGGCGGGCCAGCAAA GATTG-GGATCGA-GCCCGCGCTCG AAG CGAGCGGAGGCCTCGGTCCGCAACC GGAGCGTACGCGCGG pheS 632525 - 631446 - | phenylalanyl-tRNA synthetase, alpha subunit eno 632661 - 633962 + | phosphopyruvate hydratase gpmI 635712 - 634138 - | 2,3-bisphosphoglycerate-independent phosphoglycerate mutase ilvD 635860 - 637530 + | dihydroxy-acid dehydratase TERM 308 637544 - 637577 + T 95 -12.4 -4.28994 | opp_overlap 637544 637541, overlap 637546 GAGATCGTGAAACGA GTGGTGGGGCTGAG ACTACA CTCAGCCCCACCTG TTTTGCTAGATCGTG TERM 309 637546 - 637575 + T 100 -19.4 -3.745 | opp_overlap 637544 637541, overlap 637544 GATCGTGAAACGAGT GGTGGGGCTGAG ACTACA CTCAGCCCCACC TGTTTTGCTAGATCG purK 638692 - 637583 - | phosphoribosylaminoimidazole carboxylase, ATPase subunit purE 639219 - 638704 - | phosphoribosylaminoimidazole carboxylase, catalytic subunit trd_0647 640725 - 639235 - | isocitrate dehydrogenase (NADP) trd_0648 642195 - 640831 - | amine oxidase, flavin-containing protein TERM 310 641175 - 641145 - G 73 -12.6 -3.30124 | GTGCAGCCGCGAGAA CCTCCTCATCCCGC AGT GCGAGATAAGGATG ACTCTGCTCGACGTA TERM 311 641345 - 641371 + g 93 -17.4 -3.31461 | opp_overlap 641339 AGGAGGAGAGTGACG GCTGCTTGGTAC GTG GTACCGAGCAGC TTGTGCCGGTAGGTC secF 643129 - 642206 - | protein-export membrane protein SecF TERM 312 642588 - 642573 - G 72 -6.8 -4.24342 | GCTGTGACGAACAAA GCATCG ACTT CGACGC CGCGCAACCAGCCGA TERM 313 642832 - 642854 + g 72 -8.4 -4.07568 | opp_overlap 642827, overlap 642847 CGCCGAACGAGGCGC GGAGAGCCTG AGT CAGCTTCTCC TTTTCCGGGGAACCC secD 644611 - 643142 - | protein-export membrane protein SecD nadD 645299 - 644655 - | nicotinate (nicotinamide) nucleotide adenylyltransferase TERM 314 645013 - 644999 - G 71 -4.2 -4.56153 | opp_overlap 645000, overlap 645000 CCATCAGAAAAACAA GTTCCG CAT CGGAAT ACTCTCGGCGCAGCA gyrA 648685 - 646175 - | DNA gyrase, A subunit TERM 315 646558 - 646540 - G 73 -5.9 -4.33274 | opp_overlap 646526, overlap 646534 646542 GGGAGACCAGCAAAA GGTCGCC TTCTG GGCGAAC GACTTCTGCCGCGAT trd_0653 649766 - 648819 - | putative lipid A biosynthesis lauroyl acyltransferase trd_0654 650410 - 649763 - | hypothetical protein trd_0655 651581 - 650466 - | ino1-like myo-inositol-1-phosphate synthase related trd_0656 651813 - 651679 - | hypothetical protein trd_0657 653131 - 652019 - | putative heptosyltransferase III WaaQ trd_0658 654234 - 653128 - | AprM trd_0659 655388 - 654231 - | lipopolysaccharide core biosynthesis heptosyltransferase TERM 316 654963 - 654936 - G 77 -4.9 -4.65895 | gap 1, overlap 654938 TGGGTGAGTCAAAAA CGG-GCGGAT AGCAGGATG ATCCGCTCCG ACCCGTACCGGAACA trd_0660 656419 - 655385 - | putative glycosyltransferase fabZ 656872 - 656423 - | beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ purA 658188 - 656893 - | adenylosuccinate synthetase trd_0663 659285 - 658260 - | chaperone protein dnaJ trd_0664 660109 - 659396 - | hypothetical protein trd_0665 660918 - 660250 - | conserved hypothetical archeal protein lexA 661886 - 661242 - | LexA repressor TERM 317 661406 - 661422 + g 76 -9.4 -4.09864 | overlap 661417 661417 CCCGTCGGAGCCACG CGGCGA CGGTA TCGCCG TTTTCGGCGGTGGCT trd_0667 661988 - 662563 + | hypothetical protein trd_0668 662553 - 664931 + | MutS2 family protein trd_0669 664941 - 665165 + | hypothetical protein mfd 668668 - 665171 - | transcription-repair coupling factor TERM 318 668352 - 668382 + g 73 -9.7 -3.89614 | TCAACGGCACTCGCT CGATCCTGTGCGA AGACG TCGTACGGGAGCG TTTCTGGGGCTTGCC trd_0671 668755 - 669354 + | competence protein ComEA helix-hairpin-helix repeat region trd_0672 669351 - 670688 + | ComE-like competence protein TERM 319 670913 - 670939 + F 81 -12.2 -3.83502 | CGCGGACGCGCGAAT GGGCCCACGGGT GAG GCACGTGGGCTC TTTGGTGTGGAGATC tuf 670981 - 672183 + | translation elongation factor Tu rpmG 672223 - 672393 + | ribosomal protein L33 TERM 320 672529 - 672563 + F 76 -13.7 -3.07344 | gap 1, overlap 672534 CCCGGCTGGATCGAG CGGAAGGGGCTGAGCA GGGC TGCTC-GCCCCTTTTG TCTGTTCCCGAGTGC TERM 321 672534 - 672558 + F 100 -12.2 -4.67943 | gap 1, overlap 672529 CTGGATCGAGCGGAA GGGGCTGAGCA GGGC TGCTC-GCCCC TTTTGTCTGTTCCCG trd_0679 672611 - 672880 + | preprotein translocase nusG 672877 - 673473 + | transcription termination/antitermination factor NusG TERM 322 673516 - 673469 - f 84 -14.3 -3.57263 | gap 2, opp_overlap 673470 673472 673474 673476, overlap 673474 673477 673479 AGGTCGAGCGGGAAA CGTAATCAGAGGCCGCAGCGTAG GCCT CCACGCTGCGGCCTC-G-TCATG TCTTTGAGCGGGGAA TERM 323 673470 - 673518 + F 75 -11.8 -3.53012 | opp_overlap 673469 673474 673477 673479, overlap 673472 673474 673476 GGTCGAGCGGGAAAC GTAATCA-GAGGCCGCAGCGTAGG CCT CC-ACGCTGCGGCCTCGTCATGTC TTTGAGCGGGGAAGG TERM 324 673472 - 673516 + F 77 -13 -3.34398 | opp_overlap 673469 673474 673477 673479, overlap 673470 673474 673476 TCGAGCGGGAAACGT AATCA-GAGGCCGCAGCGTAGG CCT CC-ACGCTGCGGCCTCGTCATG TCTTTGAGCGGGGAA TERM 325 673474 - 673514 + F 86 -15.6 -3.24232 | opp_overlap 673469 673474 673477 673479, overlap 673472 673470 673476 GAGCGGGAAACGTAA TCA-GAGGCCGCAGCGTAGG CCT CC-ACGCTGCGGCCTCGTCA TGTCTTTGAGCGGGG TERM 326 673512 - 673474 - f 91 -17.5 -3.28001 | gap 1, opp_overlap 673474 673472 673470 673476, overlap 673469 673477 673479 GAGCGGGAAACGTAA TCAGAGGCCGCAGCGTAG GCCT CCACGCTGCGGCCTC-GT CATGTCTTTGAGCGG TERM 327 673476 - 673511 + F 100 -19.8 -2.80821 | gap 1, opp_overlap 673474 673469 673477 673479, overlap 673474 673472 673470 GCGGGAAACGTAATC AGAGGCCGCAGCGTAGG CCT CC-ACGCTGCGGCCTCG TCATGTCTTTGAGCG TERM 328 673510 - 673477 - f 100 -24.7 -2.81888 | opp_overlap 673476 673474 673472 673470, overlap 673474 673469 673479 CGGGAAACGTAATCA GAGGCCGCAGCGTAG GCCT CCACGCTGCGGCCTC GTCATGTCTTTGAGC TERM 329 673508 - 673479 - f 100 -21.5 -2.95448 | opp_overlap 673476 673474 673472 673470, overlap 673477 673474 673469 GGAAACGTAATCAGA GGCCGCAGCGTAG GCCT CCACGCTGCGGCC TCGTCATGTCTTTGA TERM 330 673585 - 673620 + G 72 -13.2 -3.05463 | gap 1, opp_overlap 673571 673570, overlap 673606 TTGCAGTTGCCGGCG GGCAAGGCCACGCCGGC GCC GCCGGT-TGGCCCAGCC TTGGGTCAACACGGT TERM 331 673690 - 673676 - g 70 -2.7 -4.60977 | AATATAACGAGAAAA CTGCG CATCT CGCCG GACAGATCATTCCGG rplK 673540 - 673965 + | ribosomal protein L11 TERM 332 674203 - 674191 - g 81 -9.1 -4.26076 | CCACGCCGACCAAAA CGTCC GCG GGACG GTGACACTCCCCCAC rplA 674018 - 674743 + | ribosomal protein L1 TERM 333 674851 - 674883 + F 90 -15.6 -3.53224 | gap 1, opp_overlap 674840, overlap 674818 674855 GAAACCGCAGTCGCA CGTG-CCCCCTGCGT TCCG ACGCAGGGGGTCTCG TTTCGAGAGGAGGTG TERM 334 674855 - 674878 + F 89 -18.2 -3.00525 | opp_overlap 674840, overlap 674818 674851 CCGCAGTCGCACGTG CCCCCTGCGT TCCG ACGCAGGGGG TCTCGTTTCGAGAGG trd_0683 674902 - 675441 + | 50S ribosomal protein L10 rplL 675481 - 675879 + | ribosomal protein L7/L12 TERM 335 675926 - 675876 - f 86 -15.4 -3.26947 | gap 1, opp_overlap 675882, overlap 675877 675879 CAAGGTCGAGATCAA GTAGCGACGACGGGCCGGGACGC TCACTG GCGTCCCGGCCCGTC-CCTATGC TATACTGGCAGCGAA TERM 336 675923 - 675877 - f 77 -16.1 -2.55847 | gap 3, opp_overlap 675882, overlap 675876 675879 AAGGTCGAGATCAAG TAGCGACGACGGGCCGGGACGC TCACTG GCGTCCCGGCCCGTC--C-CTA TGCTATACTGGCAGC TERM 337 675923 - 675879 - f 80 -15.7 -2.81547 | gap 1, opp_overlap 675882, overlap 675877 675876 GGTCGAGATCAAGTA GCGACGACGGGCCGGGACGC TCACTG GCGTCCCGGCCCGTC-CCTA TGCTATACTGGCAGC TERM 338 675882 - 675921 + F 100 -21.4 -2.87468 | opp_overlap 675877 675879 675876 CGAGATCAAGTAGCG ACGACGGGCCGGGACGCT CACT GGCGTCCCGGCCCGTCCC TATGCTATACTGGCA TERM 339 676026 - 676046 + F 93 -18.3 -3.28712 | CGCCCCGACTGACTG GGCCGCACC ATG GGTGCGGCC TTCTCGCACGAGGGA TERM 340 676102 - 676145 + G 72 -8.7 -4.14739 | overlap 676103 TCCGATCCGAATTCT CATCGCGGACGACGAGCCG ATCATC CGGCTCGATCTCCGCGAAC TTTTGACCTCGCTCG trd_0686 676067 - 676690 + | transcriptional regulator trd_0687 678004 - 676760 - | YbbR-like protein trd_0688 678920 - 678006 - | conserved hypothetical protein TIGR00159 trd_0689 680781 - 679036 - | hypothetical protein trd_0690 681498 - 680851 - | putative chromosome replication initiation protein TERM 341 680923 - 680904 - G 73 -6.3 -4.41494 | overlap 680885 680916 CAGCGCGAATGAAAA CCGCGCG GCAAAT CGCCCGG TCGCACAGACGAGAA trd_0691 682279 - 681575 - | putative dnaD/phage-associated domain protein dnaB 683645 - 682293 - | replicative DNA helicase rplI 684135 - 683659 - | ribosomal protein L9 trd_0694 684372 - 684202 - | hypothetical protein TERM 342 684310 - 684281 - G 78 -3.4 -4.90266 | overlap 684299 TGCATGAACGAAAAA CCGGCTGTCACG AATTTA CCTGGCATCCGG GTGATCAGCGATCCG TERM 343 684838 - 684823 - g 74 -10.4 -3.81447 | CACAGCGTACAAGAA CCGCAG TGGG CTGCGG GGAGCTGGACGCAAG trd_0695 684656 - 684883 + | hypothetical protein trd_0696 685699 - 684914 - | RNA methyltransferase, TrmH family, group 3 cysS 687093 - 685696 - | cysteinyl-tRNA synthetase trd_0698 687224 - 687090 - | hypothetical protein TERM 344 687198 - 687168 - G 100 -15.5 -4.52047 | gap 1, opp_overlap 687163, overlap 687171 GATCAGATCAGAAAA GAAGCGGGCGACCA GGAT CGGTCGCCCGCT-C ACCGCTCTGATGAGA TERM 345 687196 - 687171 - G 100 -18.3 -4.36649 | opp_overlap 687163, overlap 687168 CAGATCAGAAAAGAA GCGGGCGACCA GGAT CGGTCGCCCGC TCACCGCTCTGATGA trd_0699 687462 - 687217 - | putative regulatory protein, FmdB family trd_0700 690296 - 687543 - | DNA polymerase I TERM 346 687998 - 687984 - G 71 -10 -3.6543 | overlap 687982 687996 GAAGCGCTGAAAATA CGCTTC GAT GAAGCG CTGTGCGTCTTGACG TERM 347 690198 - 690158 - G 70 -11.3 -3.39784 | gap 2, overlap 690156 GCACTTCCAATAACA TGCTGGCGAATCCGAACAC CACAT GTGT-CGG-TTCGCCGGCA CTGGTCGCGAGAGTC trd_0701 690502 - 691524 + | ATPase domain protein trd_0702 691524 - 692780 + | Protein of unknown function family TERM 348 693077 - 693091 + GF 77 -4.9 -4.614 | overlap 693079 TGAACTCGGCGGGTG GCGGG ACAAG CTCGC TTTTCTCTGGTTGCG TERM 349 694164 - 694146 - gf 80 -14.6 -3.14132 | CCGCCGGCCGAGGAA GCGTCGGA GAC TCCGACGC CTGACCCGTATGCGG TERM 350 694652 - 694610 - gf 91 -16.5 -3.72576 | opp_overlap 694616 GCTGGCCGCAGGAAA GTCGAACGCCTACGAT-GTCG CCG CGACGATCG-AGGCGTTCGTC CGCCAAAGGATCGCC trd_0703 692793 - 695546 + | Transglutaminase-like superfamily protein trd_0704 695461 - 696441 + | probable ribokinase TERM 351 696443 - 696488 + T 90 -16.8 -3.41602 | gap 1, opp_overlap 696447, overlap 696444 TCGAACGCTGGTGAC ACAAGCGCGATCGCCCGG-GC AGGAA GCTCCGGGCGATCGCGCGAGG TTCTGCTACAGTGAC TERM 352 696444 - 696487 + T 91 -20.3 -2.64747 | gap 1, opp_overlap 696447, overlap 696443 CGAACGCTGGTGACA CAAGCGCGATCGCCCGG-GC AGGAA GCTCCGGGCGATCGCGCGAG GTTCTGCTACAGTGA TERM 353 696484 - 696447 - T 100 -25 -3.48395 | gap 1, opp_overlap 696444 696443 ACGCTGGTGACACAA GCGCGATCGCCCGG-GC AGGAA GCTCCGGGCGATCGCGC GAGGTTCTGCTACAG trd_0705 698569 - 696509 - | V-type H(+)-translocating pyrophosphatase TERM 354 698686 - 698656 - R 84 -16.3 -2.85999 | gap 1 GGACTGCACACGATA CTCCGGCCA-GATG GTGC CATCATGGCCGGAG CCTGGCAAGTCGTCC trd_0706 699035 - 698718 - | hypothetical protein trd_0707 699695 - 699090 - | CoxC TERM 355 699766 - 699734 - R 91 -20 -2.56715 | gap 1, overlap 699730 699754 ACCTGCACGAACCGA GTCTCTGGGGCGGGT GAAA ACCCGCCCCAG-GAC GCCCTCCTCACGAGA trd_0708 701693 - 699774 - | quinol oxidase polypeptide I trd_0709 702995 - 701829 - | cytochrome c oxidase subunit II TERM 356 703001 - 703030 + r 77 -11.5 -3.72027 | overlap 702987 CCACGACCATTCTAC CCTGGATCGTGAT TGCT GTCACGATTCGGG TTCTTCATGCGCAGT trd_0710 703188 - 702997 - | hypothetical protein TERM 357 703918 - 703904 - g 79 -5.6 -4.65895 | opp_overlap 703903 CTGGGCATTGAAAAA GGAGAC CGA GTCGCC ATCTACTTGCCGATG acsA 703484 - 705472 + | acetate--CoA ligase trd_0712 705550 - 706728 + | acetyl-CoA acetyltransferase trd_0713 707935 - 706745 - | DNA replication and repair protein recF dnaN 709151 - 708009 - | DNA polymerase III, beta subunit trd_0715 709796 - 710392 + | hypothetical protein TERM 358 710425 - 710462 + F 88 -10 -4.36914 | gap 2, overlap 710413 710427 710428 ATGCGATCCATGGTT CGTA--TTCCCCCTGGGA TCGG TCCCAGGGGGAACGTTCG TTTTGTGAGGGGAAG TERM 359 710427 - 710458 + F 89 -15.2 -3.75115 | overlap 710425 710428 GCGATCCATGGTTCG TATTCCCCCTGGGA TCGG TCCCAGGGGGAACG TTCGTTTTGTGAGGG TERM 360 710428 - 710457 + F 84 -16.5 -2.84587 | overlap 710427 710425 CGATCCATGGTTCGT ATTCCCCCTGGGA TCGG TCCCAGGGGGAAC GTTCGTTTTGTGAGG trd_0717 710480 - 711667 + | probable cysteine desulfurase queA 712718 - 711657 - | S-adenosylmethionine:tRNA ribosyltransferase-isomerase ruvB 713772 - 712711 - | Holliday junction DNA helicase RuvB trd_0719 714015 - 713824 - | hypothetical protein trd_0720 714430 - 714311 - | hypothetical protein TERM 361 714496 - 714466 - R 100 -21.3 -4.00042 | CCTCCTAGGAAACAA CCAACGCTCCGGT ACAAG ACCGGAGCGTTGG GGTGCCTCACGGGGC trd_0723 717155 - 715431 - | putative glutathione-regulated potassium-efflux system protein KefB TERM 362 716429 - 716419 - G 70 -4.6 -4.44245 | ATACCAGCCAGAAAA GCCC CCA GAGC GAACGAGAGGCCGGC TERM 363 717146 - 717158 + g 81 -9.1 -4.28656 | CGAGAAAAATGGCTT CGCGT TCC ACGCG TTTTGCCTGTTCACT trd_0724 717469 - 717278 - | hypothetical protein trd_0725 717708 - 717547 - | hypothetical protein TERM 364 718384 - 718404 + GH 71 -10.5 -3.64716 | overlap 718383 TCATGCAGGGGGTAG GATCGGTTT TCG AGACCGATC TCTTTTACCCGATCC alaS 717681 - 720317 + | alanyl-tRNA synthetase trd_0727 720280 - 720423 + | hypothetical protein trd_0728 720569 - 721792 + | hypothetical protein trd_0729 721785 - 722270 + | conserved hypothetical protein TIGR00250 trd_0731 722248 - 722676 + | Protein of unknown function (DUF970) superfamily trd_0732 723121 - 722717 - | hypothetical protein TERM 365 723084 - 723132 + g 71 -7.6 -4.09685 | gap 3 CTTTCTGAAATCTTT GGAG-CGAGCCGGTCGACCGCTA CCGGTA TCGCGGTC-ACTGG-TCGCCTCC TTTTCGAGCGTACCG trd_0734 723258 - 723404 + | hypothetical protein trd_0733 724223 - 723357 - | 5,10-methylene-tetrahydrofolate dehydrogenase trd_0735 724882 - 724304 - | hypothetical protein trd_0736 725186 - 725650 + | Helix-turn-helix domain protein trd_0737 725647 - 725778 + | hypothetical protein trd_0738 725780 - 729280 + | DNA polymerase III alpha subunit trd_0739 730321 - 729290 - | putative cyanophycin synthetase TERM 366 730113 - 730102 - G 70 -2.2 -4.64676 | overlap 730106 GCAGTGCGAAGAAAA TGAC GCGA GCCA GACTTTCCTCGGCGA trd_0740 730591 - 730388 - | cyanophycin synthetase rdgB 731245 - 730613 - | non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family TERM 367 730793 - 730808 + g 72 -8.2 -4.09685 | opp_overlap 730772 730792, overlap 730792 ATCGTATCCGAAACC GCCGCG ACCG CGTGGC TTTTCGGCAATACAC trd_0742 732040 - 731261 - | TatD-related deoxyribonuclease glmS 733859 - 732048 - | glucosamine--fructose-6-phosphate aminotransferase, isomerizing TERM 368 734022 - 734039 + G 80 -8.3 -4.3467 | CGGTGAGCCTTTGTC CCGGCGG TTAC CCACCGG TTTTGCTCTCACCGT trd_0744 734009 - 734248 + | hypothetical protein TERM 369 735576 - 735532 - g 70 -13.6 -2.57244 | gap 2, overlap 735539 GCAGGCAGGAATGGA GCGACAACGGGCCTACCGGCTG GTA CAGC-GACTGGCCCGTCG-CGC CTGGGAGGAAGAGGT purB 734432 - 735757 + | adenylosuccinate lyase purC 735754 - 736662 + | phosphoribosylaminoimidazole-succinocarboxamide synthase purS 736663 - 736932 + | phosphoribosylformylglycinamidine synthase, purS protein purQ 736951 - 737661 + | phosphoribosylformylglycinamidine synthase I TERM 370 738742 - 738797 + G 75 -11.8 -3.48276 | gap 1, overlap 738733 CTCCGGGTGCTCGAG GACGGGCAAGTTGTTGCTGAGCTGCCG GTC TGGCTTCTCACCGACG-CTTGCCCGAC TTATGTCCGCGAAGC purL 737695 - 739896 + | phosphoribosylformylglycinamidine synthase II TERM 371 739976 - 739994 + G 78 -3.7 -4.7416 | overlap 739975 739976 GAAGAGTACAGTGGT CCACGCG AAGCG TGCGGGG TTTTTGGGGTTTTCG purF 739958 - 741430 + | amidophosphoribosyltransferase gcvT 741595 - 742722 + | glycine cleavage system T protein gcvH 742744 - 743145 + | glycine cleavage system H protein TERM 372 743274 - 743218 - g 70 -13.8 -2.57564 | gap 2, opp_overlap 743221 743261, overlap 743217 743229 CGATCGGGCGAGAAT GCTGCAGGAGATCGGCGTCGAACGACTC GAG GAGTTGTTCG-CGGCGATC-CCTGCTTC GTATCGCTTTCCCCA TERM 373 743221 - 743271 + G 100 -20.7 -3.31196 | gap 2, opp_overlap 743218 743217 743229, overlap 743261 TCGGGCGAGAATGCT GCAGGAGATCGGCGTCGAACGACTC GAG GAGTTGTTCG-CGGCGATC-CCTGC TTCGTATCGCTTTCC trd_0753 743177 - 744523 + | Glycine cleavage system P-protein TERM 374 744559 - 744586 + F 100 -16.4 -4.65895 | gap 1, opp_overlap 744554 744559 TGGGGCACAATGGAA CCCGAGCA-CTCG GTG CGAGGTGCTCGGG TTTTTGCGTAGGGGA TERM 375 744586 - 744559 - f 89 -16.4 -3.23274 | gap 1, opp_overlap 744559, overlap 744554 TGGGGCACAATGGAA CCCGAGCA-CTCG GTG CGAGGTGCTCGGG TTTTTGCGTAGGGGA engA 744609 - 745991 + | ribosome-associated GTPase EngA glyA 746017 - 747297 + | serine hydroxymethyltransferase trd_0756 747294 - 748430 + | undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase trd_0758 748467 - 748946 + | putative cytochrome c family protein ubiB 750613 - 748943 - | 2-polyprenylphenol 6-hydroxylase trd_0759 750764 - 750630 - | hypothetical protein trd_0760 750715 - 751611 + | protease htpx TERM 376 752003 - 752013 + G 74 -4.6 -4.46155 | overlap 752000 ATTCGACGACCAGCA GGGG CAG CCTC TTTTCTGGATCTATC TERM 377 752115 - 752070 - g 100 -23.4 -3.55444 | overlap 752071 752089 TTTGCACCGCGGAAA GGTCGGCAGCGAGACGAAGC GCTCGA GCTTCGTCTCGCTGCCGTAC TAGAGCACGAGTTGC TERM 378 752115 - 752071 - g 100 -25.3 -2.73124 | gap 1, overlap 752070 752089 TTGCACCGCGGAAAG GT-CGGCAGCGAGACGAAGC GCTCGA GCTTCGTCTCGCTGCCGTAC TAGAGCACGAGTTGC trd_0762 751608 - 752198 + | hypothetical protein trd_0761 752463 - 752185 - | hypothetical protein trd_0763 753200 - 752460 - | transcription regulator trd_0764 753298 - 754146 + | Protein of unknown function superfamily trd_0767 754928 - 756037 + | alcohol dehydrogenase class III tyrS 757256 - 756039 - | tyrosyl-tRNA synthetase ribF 758244 - 757240 - | riboflavin biosynthesis protein RibF trd_0770 759160 - 758252 - | tRNA pseudouridine synthase B TERM 379 758478 - 758452 - G 75 -3 -4.80178 | gap 1, overlap 758471 CAGGAACCAACAAAA CGG-GGAGTTC CGCAAC GAACTCATCCG GGTGACGAGCGATCA trd_0771 760153 - 759167 - | exopolyphosphatase-related protein rbfA 760574 - 760185 - | ribosome-binding factor A TERM 380 760446 - 760430 - G 71 -12.3 -3.20841 | overlap 760428 AGATGGAGACGAACA CCTTCGC ATG GCGAAGG TCGGGACTCATCTCG TERM 381 760596 - 760632 + r 81 -16.5 -2.72661 | overlap 760581 CTCCCCTCGCGCGGC GAGCCGCGCGGGCAG ACGTTCA CTGCCCGCGCGGGAC TCGTTCGACGTGATA infB 762474 - 760615 - | translation initiation factor IF-2 TERM 382 762141 - 762172 + g 70 -5.8 -4.30844 | gap 1 CGGCACCAGGCTCCT GGGCACTGGCTCGGA CAA TCTCGGCCAG-GCTC TTTTCCTGGTGGACT TERM 383 762423 - 762433 + g 72 -6.8 -4.31397 | overlap 762421 TCCGCTGTGCAGTCA TCGG CGA CCGA TTGTTTTGTACCGGT trd_0774 762863 - 762471 - | Protein of unknown function (DUF448) family nusA 764179 - 762860 - | transcription termination factor NusA TERM 384 764269 - 764245 - H 70 -2.7 -4.62783 | opp_overlap 764250, overlap 764250 CAGCCAGGGCAAAAA TTAAAGTGGGC ATT GCCCACTTGTC CGGGGCGCTCCGTTT TERM 385 764264 - 764250 - H 88 -11.4 -4.32649 | opp_overlap 764250, overlap 764245 AGGGCAAAAATTAAA GTGGGC ATT GCCCAC TTGTCCGGGGCGCTC trd_0776 764314 - 764427 + | hypothetical protein TERM 386 764717 - 764739 + G 72 -3.3 -4.60924 | overlap 764718 764719 764721 TTGATGATCACGGTG GGGAGCACG CTCAT CGTGCTCGG TTTTTGGCAACTTTC trd_0777 764501 - 765889 + | putative conserved hypothetical protein gap 765924 - 766946 + | glyceraldehyde-3-phosphate dehydrogenase, type I pgk 766982 - 768160 + | phosphoglycerate kinase tpiA 768170 - 768952 + | triosephosphate isomerase secG 768958 - 769179 + | preprotein translocase, SecG subunit trd_0782 769206 - 770924 + | putative periplasmic oligopeptide-binding protein of oligopeptide ABC transporter trd_0783 770990 - 771178 + | mttA/Hcf106 family trd_0784 771440 - 771186 - | hypothetical protein trd_0785 771716 - 771892 + | hypothetical protein trd_0786 772667 - 772365 - | Map3k10 protein trd_0787 772642 - 772893 + | hypothetical protein lepB 772912 - 773577 + | signal peptidase I TERM 387 773918 - 773935 + G 76 -5.6 -4.46926 | overlap 773885 GAGGTAGCGGTCACG GATCTC GCTCAG GAGATC TTTTATGCTCGGATC trd_0789 773684 - 774229 + | Uncharacterized ACR trd_0790 774237 - 774566 + | hypothetical protein trd_0791 775020 - 774574 - | hypothetical protein trd_0792 775114 - 775662 + | putative NAD-reducing hydrogenase TERM 388 776145 - 776162 + G 71 -7.7 -4.11216 | CGATCGGTGGCTACC GCGCTTT CCTC AAGGCGC TTTTCGAGATGACGC trd_0793 775646 - 777370 + | NAD-dependent formate dehydrogenase beta subunit trd_0794 778420 - 777431 - | putative ornithine cyclodeaminase TERM 389 778672 - 778704 + H 74 -11.4 -3.62518 | gap 1, opp_overlap 778679, overlap 778662 778673 778675 778679 GCTCGGGGAGCCGGA TG-AGGAAGCCACCC GATC GGGTGGCTTCCTGTG TTTGACGCTGTTTCG TERM 390 778673 - 778702 + H 90 -16.5 -3.38603 | opp_overlap 778679, overlap 778672 778662 778675 778679 CTCGGGGAGCCGGAT GAGGAAGCCACCC GATC GGGTGGCTTCCTG TGTTTGACGCTGTTT TERM 391 778675 - 778700 + H 100 -19.1 -3.25472 | opp_overlap 778679, overlap 778673 778672 778662 778679 CGGGGAGCCGGATGA GGAAGCCACCC GATC GGGTGGCTTCC TGTGTTTGACGCTGT TERM 392 778696 - 778679 - H 74 -12.7 -3.21416 | opp_overlap 778675 778673 778672 778662 778679 GAGCCGGATGAGGAA GCCACCC GATC GGGTGGC TTCCTGTGTTTGACG TERM 393 778679 - 778696 + H 77 -12.7 -3.42257 | opp_overlap 778679, overlap 778675 778673 778672 778662 GAGCCGGATGAGGAA GCCACCC GATC GGGTGGC TTCCTGTGTTTGACG trd_0796 778861 - 779847 + | glyoxylate reductase trd_0797 779849 - 781150 + | 3-oxoacyl-[acyl-carrier-protein] synthase II trd_0798 781201 - 781377 + | hypothetical protein TERM 394 781529 - 781508 - T 86 -10.1 -4.26622 | overlap 781501 AAAGTAGAGGGAAAA TCGTCCCGT TGCC ACGGGGCGA ATGCGTCCGGCTCGC TERM 395 781776 - 781742 - T 100 -21.6 -2.82635 | opp_overlap 781731 ATCGTCAGCATGATA TTCTCCCTTCCGTTGG TTT CCTACGGAAGGGAGAA TAGCAGAAAAGGGTT trd_0799 782905 - 781796 - | sigma factor MysA TERM 396 782766 - 782792 + g 78 -10.8 -3.96892 | TGGAGGCGTGAGTGT CGTGAGGGAAGG AGG CCTTCGCTCTCG TTTGTCCTCAAGGTT trd_0800 782971 - 783204 + | hypothetical protein ruvC 783192 - 783683 + | crossover junction endodeoxyribonuclease RuvC TERM 397 783837 - 783818 - g 82 -6.4 -4.62783 | gap 1 CAGCGAGTCGAAAAA GCCGGCGAG TTG CT-GCCAGC GGATGCTGAACTGAG trd_0802 783692 - 784489 + | hemolysin A trd_0803 786200 - 785244 - | ArgK protein TERM 398 785394 - 785441 + g 71 -10.6 -3.62597 | gap 2, opp_overlap 785391 GATGCGAAGACAGCG CGTGCGGAGAGTGTGCTGCCAC AGACGA GTGGCAGCACGG-CGCCGC-CG TTCTTCGAGGATGCC trd_0804 786617 - 786207 - | Sbm protein trd_0805 787176 - 786631 - | putative ATP:corrinoid adenosyltransferase BtuR/CobO/CobP trd_0806 787329 - 787201 - | hypothetical protein pth 788088 - 787369 - | peptidyl-tRNA hydrolase trd_0808 789193 - 787967 - | putative glycosyltransferase TERM 399 789475 - 789465 - g 72 -6.8 -4.25056 | CAGTCCAGCAAGAAA CGCA TGC TGCG CTACAGGAGACGCGG trd_0809 789236 - 789751 + | putative twin-arginine translocation protein, TatA/E family trd_0810 790439 - 789765 - | putative ubiE/COQ5 methyltransferase family protein TERM 400 790260 - 790308 + gF 91 -16.8 -3.53224 | gap 2, opp_overlap 790253 790256 790275 CTCAGCAACGACTCG CGCACCGGCAAGCCAGGGTAACGC GTT GCGTTGCCA-GGCTTGCCAG-GCG TTTCCGAAGAGCATC tgt 790438 - 791730 + | queuine tRNA-ribosyltransferase trd_0812 791738 - 792025 + | Acylphosphatase TERM 401 792772 - 792744 - gf 74 -13.2 -3.25823 | opp_overlap 792730 CGGGGCTGATATCAA GATCGTCGCCCA GGGTA TGGGCTACGATC CACGAATCGGCCCGC trd_0813 792043 - 793359 + | UDP-glucose 6-dehydrogenase TERM 402 793419 - 793440 + GF 95 -12.3 -4.37092 | gap 1, opp_overlap 793415 793419 GGCGAATCCAACGCA CGCTCGCCCG TTT CGGGC-AGCG TTTTCTGGAACGCGT acpS 793331 - 793774 + | holo-(acyl-carrier-protein) synthase trd_0815 793789 - 795423 + | protein of unknown function:YjeF-related protein, N-terminal trd_0816 795495 - 795995 + | IMP dehydrogenase trd_0817 796586 - 796047 - | DNA binding domain, excisionase family protein trd_0818 797544 - 796747 - | metallo-beta-lactamase superfamily protein trd_0819 798240 - 797548 - | conserved hypothetical protein TIGR00044 TERM 403 798076 - 798105 + g 75 -4.1 -4.60041 | opp_overlap 798076, overlap 798078 GTTTTCCCCGAAAAG GCGTAGGCCGAGT TCGT ACGCTGCCTGCAC TTTTTCCCGATCGAT trd_0820 799035 - 798265 - | conserved hypothetical protein TIGR00726 TERM 404 798580 - 798566 - G 70 -7.8 -3.98009 | AGAAAAGCCCACAAA CGCTCA GGG CGAGCG GAAAACAGTGTGCAC trd_0821 800687 - 799032 - | putative acetolactate synthase large subunit trd_0822 801109 - 800897 - | hypothetical protein trd_0823 801834 - 801106 - | endonuclease V fmt 802796 - 801855 - | methionyl-tRNA formyltransferase TERM 405 804216 - 804236 + G 70 -4.7 -4.37502 | gap 1 GCGATCTTCCTCACG CTGGCAGC GAGCGG GC-GCCAG TTTTGCTGTGCTGCT TERM 406 805342 - 805308 - g 75 -7.1 -4.36914 | gap 1, overlap 805310 CTTCGGCGGAGAAAA GC-CGATGGAGCTGGC ATAC GCGAACGCCATCGCGC GCAGTCGCTGGTTGC trd_0825 802972 - 807429 + | hypothetical protein trd_0826 807439 - 809778 + | hypothetical protein infC 810054 - 810437 + | translation initiation factor IF-3 rpmI 810442 - 810642 + | ribosomal protein L35 rplT 810659 - 811012 + | ribosomal protein L20 TERM 407 811053 - 811098 + G 100 -17.6 -3.96148 | gap 1, overlap 811054 TCCACTCGTTAAGTT CGCCCGCTCCCT-TCGCGAGC GACGA GTCCGCGAGAGGGAGCGGGCC TTTCTCGTCGAGGGG TERM 408 811054 - 811097 + G 100 -21.1 -2.97475 | gap 1, overlap 811053 CCACTCGTTAAGTTC GCCCGCTCCCT-TCGCGAGC GACGA GTCCGCGAGAGGGAGCGGGC CTTTCTCGTCGAGGG trd_0830 811009 - 811824 + | possible 23S rRNA methyltransferase tsnR TERM 409 811828 - 811807 - f 77 -10.9 -3.75629 | CATGCTGAACGCAAA GCGACTACT GGAG AGTAGCCGC ACCCTCTTGCAAATT trd_0831 811919 - 812197 + | DNA-binding protein HU 1 gyrB 814175 - 812265 - | DNA gyrase, B subunit trd_0833 815161 - 814172 - | hypothetical protein trd_0834 815542 - 815165 - | Domain of unknown function (DUF1025) superfamily trd_0835 817241 - 815601 - | PbpA trd_0836 818549 - 817245 - | cell division membrane protein mtaP 819422 - 818553 - | methylthioadenosine phosphorylase TERM 410 819089 - 819075 - G 72 -3.5 -4.65895 | gap 1, overlap 819056 GCTCTCATCGAAAAA CGAGCG AGGC CGC-CG GACAGTTCGGTCGAC TERM 411 819536 - 819550 + G 74 -2.7 -4.72272 | overlap 819537 TCCGGCGACGATCGG TGGCC AGTGG GGCCC TTTTTGGTGGGCCAC trd_0838 819483 - 820184 + | hypothetical protein TERM 412 820288 - 820300 + G 80 -4.8 -4.84311 | CTACCGGCTCTCCTT GCAG CTGGA CTGC TTTTGTTCTCTCAAG TERM 413 820359 - 820371 + G 72 -3.3 -4.59773 | overlap 820356 GCTCTTTCTCATGCC GGTGG GAC TCGCC TTTTTCCCACTCGGC trd_0839 820171 - 821541 + | O-Antigen Polymerase family TERM 414 822376 - 822409 + G 77 -10.9 -3.81146 | gap 1 CCGGACGACCCAGGC CGGCG-ATGCCCGGAT ATC AGCCGGGCGCGCGCCG TTCTTGGTTGGGAGC trd_0840 821557 - 822510 + | UDP-glucuronate decarboxylase trd_0841 822512 - 824011 + | O-Antigen Polymerase family trd_0842 824026 - 825027 + | hypothetical protein TERM 415 825800 - 825770 - g 79 -14.7 -2.93723 | overlap 825765 TCTCGAGGAAGCACA GCAGCGTGGGCGA GTGTT TCGCCTACGCCGC ATCAGCGACCAGACT trd_0843 825024 - 826160 + | AprM trd_0845 826216 - 827802 + | Polysaccharide biosynthesis protein trd_0844 828938 - 827793 - | hypothetical protein trd_0846 829473 - 828946 - | putative lipoprotein TERM 416 830715 - 830670 - g 85 -16.9 -3.1355 | gap 1, opp_overlap 830655 830712 GTGATCGACAGCGAA GCCGCACTCGCTGT-CACACTC TTA GCGGGCGCACAACGAGTGCGGC CAGAGATTCGCCGTT trd_0847 829707 - 830741 + | DNA polymerase III, delta subunit superfamily trd_0848 831046 - 830747 - | 30S ribosomal protein-like protein trd_0849 831071 - 830937 - | hypothetical protein TERM 417 832186 - 832209 + G 75 -11.8 -3.53224 | gap 1 TACCGCACCCATGGG CAGCTCGCTGA GCT TC-GCGAGCTG TTTGGCCGAGCACTC mviN 831268 - 832887 + | integral membrane protein MviN TERM 418 833918 - 833936 + G 75 -8.1 -4.24606 | overlap 833907 833904 TCGAGCCTGAGTCCT CCGAGGC ACTCG GCTTCGG TTTTCGCTGTGGCTT lepA 832918 - 834744 + | GTP-binding protein LepA trd_0852 834752 - 836122 + | putative tetrapyrrole (corrin/porphyrin) methylases aspS 836158 - 837996 + | aspartyl-tRNA synthetase TERM 419 838051 - 838013 - T 70 -11.7 -3.32963 | gap 1, overlap 838016 838020 ACTCGGAGGCGAGAA CGA-GGAAGGGGCCTGTC CAAT GACCGGCCCCTTCGACCG TGGTGAGCAGCGAGA TERM 420 838047 - 838016 - T 73 -14.4 -2.83822 | overlap 838013 838020 CGGAGGCGAGAACGA GGAAGGGGCCTGTC CAAT GACCGGCCCCTTCG ACCGTGGTGAGCAGC TERM 421 838043 - 838020 - T 80 -13.8 -3.30474 | overlap 838016 838013 GGCGAGAACGAGGAA GGGGCCTGTC CAAT GACCGGCCCC TTCGACCGTGGTGAG trd_0854 838965 - 838078 - | probable manganese catalase trd_0855 839718 - 839590 - | hypothetical protein TERM 422 839651 - 839675 + g 77 -15.7 -2.62616 | opp_overlap 839648 839652, overlap 839671 839672 ACGAGGGACGAAGCG AGCGACCGAGC GCG GCTCGGTCGCG TGATCTCACGCGTGA TERM 423 839674 - 839652 - G 89 -19.2 -2.57244 | opp_overlap 839651 839671 839672, overlap 839648 CGAGGGACGAAGCGA GCGACCGAGC GCG GCTCGGTCGC GTGATCTCACGCGTG TERM 424 840136 - 840155 + r 100 -9.2 -5.0916 | opp_overlap 840137, overlap 840137 GGCACTAGAACAGTA ACCGGCTC AGAT GAGCCGGC TTTTTCTATTGAACG TERM 425 840137 - 840154 + r 81 -12.7 -3.64773 | opp_overlap 840137, overlap 840136 GCACTAGAACAGTAA CCGGCTC AGAT GAGCCGG CTTTTTCTATTGAAC TERM 426 840154 - 840137 - R 78 -12.7 -3.43203 | opp_overlap 840137 840136 GCACTAGAACAGTAA CCGGCTC AGAT GAGCCGG CTTTTTCTATTGAAC trd_0859 841182 - 840247 - | putative IolC myo-catabolism protein TERM 427 841354 - 841378 + H 93 -17.2 -3.64703 | ACTCCCCAGCCGATC CGCCACCGTC TCTTT GACGGTGGCG TTTCCATCAGAACGC trd_0861 841488 - 842762 + | putative GTPase of unknown function subfamily trd_0862 842856 - 843221 + | Roadblock/LC7 domain superfamily purM 843235 - 844314 + | phosphoribosylformylglycinamidine cyclo-ligase TERM 428 844654 - 844644 - g 72 -8.2 -4.12532 | opp_overlap 844643 844644 CCTTGTATAGACAAA CGCG TCT CGCG GTTCTGAGCGGGGCT trd_0864 844382 - 844957 + | GTP-binding domain protein trd_0865 845002 - 845598 + | putative exopolyphosphatase TERM 429 845713 - 845767 + G 76 -9.2 -4.08945 | opp_overlap 845732, overlap 845716 CCACCGGCGGTACAG CTCGTGAGCTCCGAGAACACGGGT TACCGGT ACGCGAGATCTCGGAGCTGACTGG TTTTCCGGAGCTGCT purH 845613 - 847127 + | bifunctional purine biosynthesis protein PurH trd_0866 847738 - 847124 - | hypothetical protein trd_0868 848924 - 847731 - | hypothetical protein TERM 430 848834 - 848859 + g 81 -9.7 -4.2803 | gap 1, opp_overlap 848837, overlap 848837 CACGCAAGAGTTCGA GAAGCGCAG-GG CGT CCACTGCGCTCC TTTTCGATTACCGTC trd_0869 850093 - 848921 - | hypothetical protein TERM 431 849553 - 849500 - G 71 -4.5 -4.55491 | gap 1, opp_overlap 849508 CAGCCAACGATAAAA GTCGTGCTCGGGCAGTCGCCAGTT CCTGATC AACCAGCGAATGTTCG-GCTCGAC GAAATAGAGTTTTCC trd_0870 852419 - 850110 - | G5 domain family TERM 432 852779 - 852800 + G 74 -5.1 -4.58283 | TGGGAGTTCGCTCTC GCGTGTGGT TCGG ACAACATGC TTTTTGGCGGACTTG trd_0871 852567 - 852950 + | putative endoribonuclease L-PSP TERM 433 853094 - 853133 + F 88 -17.3 -3.12351 | gap 1, opp_overlap 853099, overlap 853099 GCGGAGTACGGGAGT CACAACGGTGGCG-CGGC GAACA GCCGTTGCCACTGTTGTG TTACGTATAGCGCAA TERM 434 853099 - 853128 + F 74 -10 -3.70446 | gap 1, opp_overlap 853099, overlap 853094 GTACGGGAGTCACAA CGGTGGCG-CGGC GAACA GCCGTTGCCACTG TTGTGTTACGTATAG trd_0873 853265 - 853735 + | transcription elongation factor greA lysS 853815 - 855404 + | lysyl-tRNA synthetase TERM 435 855842 - 855817 - T 93 -6.1 -5.42259 | CGAGCCCCAAAAAAA GCTGGCCGC GGATATAT GCAGCCAAC GTTCGGTCGACGATC trd_0875 857383 - 856532 - | putative ABC transporter, permease protein trd_0876 858285 - 857383 - | binding-protein-dependent transport systems inner membrane component TERM 436 858387 - 858354 - R 93 -18.9 -2.79915 | overlap 858340 ATCGATGCGATGACA CGCTACCGGGGGAGC GAGC ACTCCCCCGGCAGCA GCGTCACTGGACTGC trd_0878 859629 - 858406 - | polyamine ABC trasnporter, periplasmic polyamine-binding protein trd_0879 861296 - 859680 - | Peptidase family M20/M25/M40 TERM 437 860717 - 860696 - G 76 -5.8 -4.54821 | overlap 860697 ACTCGAAGGAGAAAA CGCAGCTC CAGTAC GAGCCGCA GTGCGTTTCCCAGGC trd_0880 862568 - 861339 - | putative dehydrogenase protein TERM 438 861385 - 861401 + g 88 -13.7 -3.85698 | opp_overlap 861380 TACTGGAAGATCGCG GCCTCGC GCA GCGAGGC TTTGTCGACCACGCC trd_0881 863715 - 862582 - | ABC transporter ATP-binding protein trd_0882 865540 - 863915 - | putative carboxyltransferase subunit of acetyl-CoA carboxylase trd_0883 865577 - 865768 + | hypothetical protein TERM 439 865816 - 865829 + F 78 -3.1 -4.90778 | overlap 865817 CAGCGATCGGAGGAA TCGAT GCGT ATCGG TTTTGTTTCCATACG TERM 440 866741 - 866713 - g 78 -13.8 -3.20164 | opp_overlap 866712 866713 GGAGATGCAACCGAA GCTGGGGCCCCC GGCGA GGGGACCGCAGC ATTATGGGCCGCGCT trd_0885 865819 - 867294 + | hypothetical protein otsB 868079 - 867288 - | trehalose-phosphatase trd_0886 868173 - 869465 + | transporter, major facilitator family trd_0887 870673 - 869471 - | putative FAD dependent oxidoreductase trd_0888 871173 - 870685 - | CBS domain protein/ACT domain protein trd_0889 871424 - 872572 + | putative FAD dependent oxidoreductase trd_0890 872599 - 872889 + | Protein of unknown function (DUF503) superfamily trd_0891 873183 - 872932 - | hypothetical protein trd_0892 873435 - 873310 - | hypothetical protein TERM 441 873436 - 873402 - G 89 -5.4 -5.1925 | overlap 873406 GCAGAATCGAAAAAA CGATCGAGCGCGCGGA AAT CCCGCGCGGGCACACG TCTGGGATGTCGCTG trd_0893 874894 - 874022 - | DnaJ domain protein trd_0894 874986 - 876662 + | acetolactate synthase trd_0895 876683 - 876964 + | hypothetical protein TERM 442 877044 - 877068 + T 88 -17.2 -3.1506 | GCGATCTGCCGATCC CCGGGAAGCG CTCAT CGCTTCCCGG TTCCTGAACGCATTT trd_0896 877461 - 877315 - | hypothetical protein trd_0898 877886 - 878143 + | hypothetical protein trd_0899 878433 - 879332 + | putative 5,10-methylenetetrahydrofolate reductase fhs 879329 - 880984 + | formate--tetrahydrofolate ligase trd_0901 881037 - 882449 + | putative aminomethyltransferase TERM 443 882476 - 882506 + F 100 -12.5 -4.55295 | opp_overlap 882477 882478, overlap 882477 882478 CGGGCAAGTCACAGA ATCCCCTGGGCCG ATTCG TGGCCCAGGGGGC TTTCTTTCTGCCGGA TERM 444 882477 - 882505 + F 88 -16 -3.32695 | opp_overlap 882477 882478, overlap 882476 882478 GGGCAAGTCACAGAA TCCCCTGGGCCG ATTCG TGGCCCAGGGGG CTTTCTTTCTGCCGG TERM 445 882505 - 882477 - f 78 -13.1 -3.551 | opp_overlap 882477 882476 882478, overlap 882478 GGGCAAGTCACAGAA TCCCCTGGGCC GATTCGT GGCCCAGGGGG CTTTCTTTCTGCCGG TERM 446 882478 - 882504 + F 83 -17.3 -2.59135 | opp_overlap 882477 882478, overlap 882477 882476 GGCAAGTCACAGAAT CCCCTGGGCCG ATTCG TGGCCCAGGGG GCTTTCTTTCTGCCG TERM 447 882504 - 882478 - f 81 -16.6 -2.72739 | opp_overlap 882478 882477 882476, overlap 882477 GGCAAGTCACAGAAT CCCCTGGGCC GATTCGT GGCCCAGGGG GCTTTCTTTCTGCCG TERM 448 884173 - 884190 + G 77 -11.3 -3.78329 | opp_overlap 884165, overlap 884165 884186 CAGCAGACTGTTCCC GTCGACC AGTT GGTCGAC TTTCGATTCGTCACG trd_0902 883036 - 884226 + | putative ABC transporter substrate-binding protein trd_0903 884404 - 885333 + | hypothetical protein trd_0904 885330 - 886061 + | LmbE-related protein trd_0905 886081 - 886764 + | demethylmenaquinone methyltransferase trd_0906 886781 - 887761 + | catechol 2,3-dioxygenase TERM 449 887829 - 887776 - f 71 -8.1 -4.09511 | gap 1, opp_overlap 887784, overlap 887777 887780 AAGAGCCTCGCAAAA TCGA-CCTACCTGCGGAGGGTGAAGC CTG GCTCCATCCTCCGCAGGTTTTCTCTA TCGACCAGCAGTTCC TERM 450 887784 - 887820 + F 100 -23.1 -4.60797 | opp_overlap 887780 887777 887776 CGCAAAATCGACCTA CCTGCGGAGGGTGAAGC CTG GCTCCATCCTCCGCAGG TTTTCTCTATCGACC trd_0907 888280 - 889731 + | polyglutamate synthase CapA TERM 451 890041 - 890064 + T 100 -16.8 -5.24129 | TCGCTTCCGCTGGCA TCCCGGAACC ACTC GGTTCCGGGA TTTTTTCTCGCAGAG trd_0909 890260 - 890084 - | hypothetical protein trd_0910 891213 - 890428 - | oxidoreductase, short chain dehydrogenase/reductase family TERM 452 892182 - 892223 + G 75 -10.3 -3.85817 | overlap 892181 892179 GAAAACCATTACCGA CTCGCAGGCTT-CCGCGAG CTGATT CTC-CGGCAAGCCTGCCAG TTTGTGGCACACGAT TERM 453 892271 - 892248 - g 71 -7.4 -4.17657 | gap 1 CACGATATTCCAAAA TGGGCGGCCTC CTC GAGGCC-CGCA ACGTCGCTGCACTGG trd_0911 891357 - 892496 + | putative isomerase TERM 454 892501 - 892546 + F 72 -13.4 -3.05596 | overlap 892504 GCATGGTCTGATGCT GAACGTCGATGTCGCGC-GGGC TCAC GCCAAGCGTGGCA-CGACGTTC TTCCGTGAACCGGTC TERM 455 892575 - 892592 + F 83 -2.6 -5.22006 | opp_overlap 892575 892576, overlap 892576 TCTGACACCAGAACA GCTCGC TGCACT GCGAGA TTTTTGTTGTCATGG trd_0912 892753 - 893802 + | mannonate dehydratase trd_0913 893972 - 895234 + | hypothetical protein trd_0914 895551 - 895243 - | YggX trd_0915 896136 - 896318 + | hypothetical protein trd_0916 897457 - 896456 - | GDP-6-deoxy-D-lyxo-4-hexulose reductase metK 898715 - 897477 - | S-adenosylmethionine synthetase TERM 456 898307 - 898281 - G 71 -10.1 -3.64703 | CTCGGTGCACGCAAA GCCGACGACCA TTCCC TGGTCGCCCGC GCCGATCCGATCGAA ahcY 900029 - 898761 - | adenosylhomocysteinase trd_0919 901123 - 900026 - | initiation factor 2b family protein trd_0920 902808 - 901120 - | 3-dehydroquinate synthase mdh 902946 - 903875 + | malate dehydrogenase, NAD-dependent TERM 457 904675 - 904651 - g 71 -10.8 -3.57144 | gap 1 GGTGGGATTCCCAAA CTCG-TCGGCA TCGC TGCCGATCGAG AAGAGGATGTCGCAC trd_0923 903904 - 905232 + | probable molybdopterin biosynthesis moea protein trd_0922 906140 - 905229 - | Integral membrane protein DUF6 trd_0924 906279 - 907214 + | putative ROK-family transcriptional regulator trd_0925 907300 - 907437 + | hypothetical protein trd_0926 907734 - 907859 + | hypothetical protein TERM 458 907981 - 907996 + G 73 -6 -4.36914 | TGTCTTCGCGCTCTT GCGTGC GACT GCTCGC TTTTATCCCACACAC TERM 459 908328 - 908306 - g 82 -5.5 -4.72272 | gap 1, overlap 908309 CCGCCCGAGGAAAAA GCAG-CCCCG GTCG CGGAGCCCGC AATTGCAGCGCCAGC TERM 460 909029 - 909046 + G 75 -4.1 -4.65895 | AACCGCGGCGGATTC CTTTTCG GGTT CGAACAG TTTTTCGCTGCCAAC TERM 461 909289 - 909275 - g 74 -11.4 -3.61398 | opp_overlap 909279 TTCGCGGGTCAAGAA CCGCTC GAC GAGCGG ACTCGTCGCTCCTAT trd_0927 907886 - 909526 + | hypothetical protein trd_0928 909532 - 910467 + | phycocyanin alpha phycocyanobilin lyase related protein trd_0929 910461 - 911483 + | femAB family protein trd_0930 911488 - 913005 + | UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase trd_0931 913029 - 913958 + | acylaminoacyl-peptidase trd_0932 913972 - 914106 + | hypothetical protein TERM 462 914467 - 914449 - T 76 -5.9 -4.57073 | overlap 914451 CAGCCGTCTTAAAAA CGGCAGG GAAGA CCTCCCG TGCGGGTTCGAGTCC TERM 463 914656 - 914623 - T 88 -11.1 -4.2828 | gap 1, opp_overlap 914646 CTGCATCCACGAAAA CACCTCGCT-CGTTGA GCC TCAACCCAGCGAGGCG GGTGTGCTAGACTGA trd_0935 915192 - 914950 - | hypothetical protein trd_0936 915700 - 915413 - | putative glutathione-dependent formaldehyde dehydrogenase trd_0937 915880 - 915743 - | hypothetical protein TERM 464 915996 - 915977 - H 100 -12.1 -4.56914 | CGAGGTAAACGAAAA GCGCCCC GGTCAA GGGGCGC TGGAGCGGAAGACGG trd_0939 916235 - 916387 + | hypothetical protein trd_0940 918347 - 917037 - | putative serine/threonine protein phosphatase TERM 465 918014 - 917978 - G 74 -10.8 -3.72027 | overlap 917979 917981 ACGGTCGACGAACAA CGATTGCGGAGGCAGC CTCTT GCGGACTCCGCAACCA GTAACGGCGTTGGAA trd_0942 918714 - 919085 + | Domain of unknown function DUF143 superfamily trd_0943 919667 - 919266 - | hypothetical protein trd_0944 920931 - 919675 - | putative trehalose phosphorylase TERM 466 919773 - 919762 - G 78 -4.4 -4.72272 | TCGGGTCACCAAAAA GTTC TCTC GAAC GCGCGCCCGGCCTCG TERM 467 919880 - 919850 - G 71 -9.7 -3.72695 | opp_overlap 919849 919846 ACTCGCTCGACGAAA GCATCCTCGTCGA GCGGA TCGACTAGGAAGC CTCCTTCTCCGTCTG TERM 468 920734 - 920707 - G 88 -9.2 -4.62471 | gap 1 CGTAACCTCGAAAAA CCGGCT-GTCACC CGC GATGACGAGCCAG TCGACCGACAGTCCG pncB 922311 - 920947 - | putative nicotinate phosphoribosyltransferase TERM 469 922224 - 922206 - G 72 -6.6 -4.25283 | opp_overlap 922216, overlap 922207 922215 ACTTGCGCACGAAAA GGCTGAAC ACC GCTCGGCC AGCATGACCCAGCGT trd_0946 923037 - 922336 - | putative RNA polymerase sigma factor trd_0947 923447 - 923034 - | hypothetical protein trd_0948 923616 - 924047 + | heat shock protein, Hsp20 family TERM 470 924069 - 924108 + T 81 -11.6 -3.98484 | gap 3, overlap 924072 924085 CAGACGCTTCCGTAC CAGGGCGACCCCGCTCCTG CGATC CAGG--CGGGGTCGCC-TG TTTCTCCGTTCGGTT TERM 471 924072 - 924106 + T 84 -14.4 -3.57808 | gap 2, overlap 924069 924085 ACGCTTCCGTACCAG GGCGACCCCGCTCCTG CGATC CAGG--CGGGGTCGCC TGTTTCTCCGTTCGG trd_0949 925892 - 924123 - | ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent TERM 472 924428 - 924402 - G 74 -13 -3.1855 | overlap 924397 924427 TGTCGCAACACGGAA GAGTCGCCGGAG CTC CTCCGGCAAATC GGTGCGATGACCGAT TERM 473 926383 - 926401 + G 72 -11 -3.53444 | overlap 926379 CTCAGGTTCTGGCGC TCGGCAGC GAA GCTGCTGA TTCCTTCTTCGCCGA trd_0950 926064 - 926855 + | hypothetical protein trd_0951 926852 - 927769 + | Peptidase family T4 TERM 474 928551 - 928573 + G 84 -9 -4.48221 | CCGCGGTTTCGTCAC GCTCGAGCTG AGT CCGCTCGCGC TTTTCTCGCTTCGTC trd_0952 927847 - 928704 + | hypothetical protein TERM 475 928728 - 928691 - T 78 -13.6 -3.27298 | gap 1, opp_overlap 928699, overlap 928697 928699 GTCGCGAACCACCAA CGAGAAGACGCTGAGGT TGCTC ACCCCAGCGT-TTCCCG TCACCGACGTCAACG TERM 476 928721 - 928699 - T 70 -11.3 -3.34404 | opp_overlap 928699, overlap 928697 928691 CCACCAACGAGAAGA CGCTGAGGT TGCTC ACCCCAGCG TTTCCCGTCACCGAC rpsI 929193 - 928762 - | ribosomal protein S9 rplM 929688 - 929221 - | ribosomal protein L13 TERM 477 929575 - 929587 + g 73 -9.1 -3.91084 | GATTTGACTCGCCAG GCGAC CGA GTCGC TTTCCTTCCGCGTCG truA 930553 - 929714 - | tRNA pseudouridine synthase A rplQ 930926 - 930573 - | ribosomal protein L17 rpoA 931909 - 930929 - | DNA-directed RNA polymerase, alpha subunit rpsD 932600 - 931947 - | ribosomal protein S4 rpsK 933043 - 932630 - | ribosomal protein S11 rpsM 933460 - 933074 - | ribosomal protein S13p/S18e rpmJ 933583 - 933470 - | ribosomal protein L36 infA 933848 - 933603 - | translation initiation factor IF-1 map 934661 - 933912 - | methionine aminopeptidase, type I trd_0964 935347 - 934646 - | adenylate kinase TERM 478 935287 - 935269 - G 70 -5.8 -4.20696 | GCACCAATCGCAAAA GCGGAGCG ACA CGCGCTGC CTGCGTGCCCTTCCC trd_0965 936655 - 935357 - | preprotein translocase, SecY subunit rplO 937095 - 936655 - | ribosomal protein L15 rpmD 937339 - 937109 - | ribosomal protein L30 rpsE 937850 - 937302 - | ribosomal protein S5 rplR 938250 - 937876 - | ribosomal protein L18 trd_0970 938882 - 938328 - | 50S ribosomal protein L6 rpsH 939305 - 938898 - | ribosomal protein S8 TERM 479 939187 - 939224 + g 70 -11.3 -3.41878 | gap 1 TCTTTGAGGATCCGT GCGATCTCGACCAGCATC TTC GATGCTGG-CATGGTCGC TTCTGCCTTCCGGCC trd_0972 940102 - 939536 - | 50S ribosomal protein L5 rplX 940460 - 940116 - | ribosomal protein L24 TERM 480 940230 - 940204 - G 72 -11.7 -3.53012 | gap 1, opp_overlap 940209 940210, overlap 940210 CCCGTCTCCGTGAAA CGGAAA-CCCAC CCGC GTGGGCTTTCCG CAGTGCGGGCAGATG TERM 481 940301 - 940326 + g 70 -2.4 -4.62302 | overlap 940314 TGATGCCTGCCTGCC GCACTCCCGG AATCGC CCGCTGGTGC TTTTTGACGATGTTG rplN 940841 - 940473 - | ribosomal protein L14 trd_0975 941197 - 940838 - | 30S ribosomal subunit protein S17 trd_0976 941491 - 941204 - | 50S ribosomal protein L29 rplP 941928 - 941488 - | ribosomal protein L16 rpsC 942617 - 941946 - | ribosomal protein S3 rplV 942966 - 942610 - | ribosomal protein L22 rpsS 943269 - 942985 - | ribosomal protein S19 TERM 482 943231 - 943249 + g 81 -8.1 -4.58395 | CTTCTTCTTGAGTTT GGGATCG ATGTA CGGTCCC TTTTTCGACGATCGA rplB 944116 - 943289 - | ribosomal protein L2 TERM 483 943461 - 943495 + g 77 -12.1 -3.58343 | gap 1 GCGGAGCCACGCACC GCTGGTCGCCAGC-CC ATAT GGCGCTTGCGTCCAGC TTTGCCGATGCTCAC rplW 944449 - 944135 - | ribosomal protein L23 rplD 945084 - 944446 - | ribosomal protein L4/L1 family rplC 945743 - 945099 - | ribosomal protein L3 rpsJ 946150 - 945833 - | ribosomal protein S10 tuf 947366 - 946164 - | translation elongation factor Tu fusA 949527 - 947419 - | translation elongation factor G TERM 484 947966 - 947937 - G 72 -8.5 -4.07568 | overlap 947910 947938 TGCGGTCTTCGAAAA CGAAGCCGCTCCC GCGC GGCAACGGCTCCA GTTCCAACCACACAT rpsG 950038 - 949568 - | ribosomal protein S7 TERM 485 949927 - 949980 + g 91 -17.6 -3.24289 | opp_overlap 949931 CGATCCGTTCTGCAA GCGACTTCTTGCCCCGCTTCATCA CCTTGT TGATGAAGCGCTGCAAGAGTTCGC TTCCATATTTCGGGT TERM 486 950130 - 950080 - R 75 -15 -2.78384 | gap 3, opp_overlap 950088, overlap 950082 950084 950088 TTGCTCGGCATGAGA CAGACGAAGC-CGGCAATCCTGGAG CGTT CTCCCG-AT-GCCGCGCTTCGTCTG CCGACAACCACCCAG rpsL 950601 - 950173 - | ribosomal protein S12 TERM 487 950702 - 950663 - R 100 -27.4 -3.95324 | opp_overlap 950665 950667, overlap 950665 TACGCTGAACAATAA CACACCCTCGTGACCCGA GATC TCGGGTCACGAGGGTGTA GTGTACAGGAATCAG TERM 488 950665 - 950700 + r 100 -27.8 -2.62396 | opp_overlap 950663 950665, overlap 950667 CGCTGAACAATAACA CACCCTCGTGACCCGA GATC TCGGGTCACGAGGGTG TAGTGTACAGGAATC TERM 489 950700 - 950665 - R 100 -27.8 -3.56318 | opp_overlap 950665 950667, overlap 950663 CGCTGAACAATAACA CACCCTCGTGACCCGA GATC TCGGGTCACGAGGGTG TAGTGTACAGGAATC TERM 490 950667 - 950698 + r 100 -24.6 -2.85351 | opp_overlap 950665 950663, overlap 950665 CTGAACAATAACACA CCCTCGTGACCCGA GATC TCGGGTCACGAGGG TGTAGTGTACAGGAA rpoC 955106 - 950727 - | DNA-directed RNA polymerase, beta' subunit TERM 491 952850 - 952837 - G 71 -3.8 -4.56775 | opp_overlap 952821, overlap 952838 AGTTCGTTCCAAAAA CCGA GCTCTT TCGG CAAAATCTCGTTGAA rpoB 958613 - 955125 - | DNA-directed RNA polymerase, beta subunit TERM 492 955655 - 955672 + g 71 -4.1 -4.51994 | CAGGTAAACCAGCCT TTCGCAA GAGT TCGCGAA TTTCTTCTTCCTTGG TERM 493 958763 - 958729 - H 100 -10 -4.8622 | gap 1, opp_overlap 958755, overlap 958730 CGCGCGAAGGAAAAA CCGAGAGCCAAGCGG ACATCA CCGCTCGGC-CTCGC CCTGTGCTCGATGCG TERM 494 958762 - 958730 - H 78 -13.5 -3.5125 | gap 1, opp_overlap 958755, overlap 958729 GCGCGAAGGAAAAAC CGAGAGCCAAGCGG ACATCA CCGCTCGGC-CTCG CCCTGTGCTCGATGC trd_0992 958914 - 959042 + | hypothetical protein trd_0994 959574 - 959299 - | hypothetical protein trd_0995 959792 - 960352 + | Protein of unknown function, DUF583 family trd_0996 960349 - 960798 + | hypothetical protein trd_0997 960876 - 961778 + | hypothetical protein rpsB 961941 - 962813 + | ribosomal protein S2 TERM 495 962830 - 962855 + F 75 -10.3 -3.91897 | overlap 962831 CACTCTGCAGTGAGG GAGGCCGGCAC GGGC GTGCCGGCCCG TTTGTGCCTGACGAG TERM 496 962831 - 962854 + F 75 -13.8 -2.94924 | overlap 962830 ACTCTGCAGTGAGGG AGGCCGGCAC GGGC GTGCCGGCCC GTTTGTGCCTGACGA tsf 962859 - 963437 + | translation elongation factor Ts pyrH 963434 - 964192 + | uridylate kinase frr 964227 - 964784 + | ribosome recycling factor TERM 497 964870 - 964886 + GF 70 -13.7 -2.62515 | ATGGACGGGAACGGT CGCTGGG CTA CCCAGCG TGGTCTCCCCCGGTT uppS 964579 - 965562 + | undecaprenyl diphosphate synthase cdsA 965544 - 966413 + | phosphatidate cytidylyltransferase dxr 966410 - 967567 + | 1-deoxy-D-xylulose 5-phosphate reductoisomerase TERM 498 968065 - 968020 - T 72 -13.4 -3.05384 | gap 2 CTTCGCCCGATGCAA CGCGGCACGAACG--GGTCCTC GATA GAGAAACAACGCTCGTGCCGCG ATGAGTGCTGCAGGC trd_1007 968684 - 968271 - | Uncharacterized ACR trd_1008 968736 - 970871 + | Copper resistance protein CopC trd_1009 971799 - 970888 - | type II secretion system protein trd_1010 972794 - 971823 - | Bacterial type II secretion system protein F domain TERM 499 972531 - 972521 - G 72 -3.2 -4.63486 | ACCCGCGCAAGAAAA GGAA CTC TCCC ACGGTCAGACGGATA trd_1011 974249 - 972798 - | CpaF trd_1012 975514 - 974255 - | putative two-component response regulator trd_1013 976524 - 975529 - | putative membrane fimbriae assembly protein trd_1014 979422 - 976651 - | Family of unknown function (DUF470) family TERM 500 979288 - 979323 + g 100 -25.6 -3.40403 | overlap 979289 GTCGTCCTCCTCATG TGACGAGCCCTCGGCA GTGC TGCCGAGGGCTCGTCG TTCTGGTAGCGGGGG TERM 501 979289 - 979322 + g 100 -26.9 -2.64099 | overlap 979288 TCGTCCTCCTCATGT GACGAGCCCTCGGCA GTGC TGCCGAGGGCTCGTC GTTCTGGTAGCGGGG TERM 502 980108 - 980124 + rH 74 -5.1 -4.48221 | GGGCCCGATCAGCCT GTTATCC CCG GGGTAGC TTTTATCCGTTGATC TERM 503 982319 - 982359 + rH 71 -10.4 -3.62096 | gap 2 ACAGGCCGTCCAACC CCGTCGCCGCTTCCGGACGG CAG CCCTCTGG--GCGACGACGG TTTGGGCTCCTCCCG trd_1021 985141 - 985004 - | hypothetical protein trd_1022 985129 - 985905 + | probable glutamine amidotransferase TERM 504 985939 - 985906 - TR 77 -14.5 -2.86838 | gap 1, opp_overlap 985900, overlap 985903 985901 GACAGCGAAACATGA GCGAGCGGGGCTGGTC GTT GTCC-GCCCCGCTCGT AGAAGGTCTGTGATC lon 988464 - 985966 - | ATP-dependent protease La trd_1024 988931 - 988482 - | putative heat shock protein, Hsp20 family trd_1025 990006 - 989065 - | UbiA prenyltransferase:PepSY-associated TM helix trd_1026 991777 - 989999 - | hypothetical protein trd_1027 992012 - 993016 + | heptaprenyl diphosphate synthase component II trd_1028 993608 - 993018 - | hypothetical protein TERM 505 993627 - 993642 + r 71 -11.8 -3.21695 | TCTCGCCTCCAGTCG CCGGGC TCTC GCCCGG TTCGCTTCCTGATAC trd_1029 994618 - 993689 - | inosine-uridine preferring nucleoside hydrolase trd_1030 994692 - 996317 + | hypothetical protein trd_1031 997637 - 996327 - | putative hydroxypyruvate reductase TERM 506 996993 - 997017 + g 72 -11.4 -3.53444 | TGGTTCCACGGTCGG TCCGCTCGCG ATAAC CGGGAGCGGA TTTCCCAAAACATCC trd_1032 998587 - 997619 - | pseudouridine synthase, RluA family TERM 507 997804 - 997794 - G 77 -8.2 -4.21142 | ACCGGAACACAGAAA GGCC GGT GGCC ACCGTACTGCGAGTC lspA 999093 - 998584 - | signal peptidase II TERM 508 998747 - 998735 - G 70 -6.3 -4.208 | GGCCAAAACGAGAAA TCGAT GAA ATCGA CGACGAAACCATGAC TERM 509 999037 - 999013 - G 77 -4.9 -4.68994 | overlap 999015 ACCAGGAGCCAAAAA GGTGAGCACGA GCG CCTTGCTCAGC TGATCAACGACCAGA radA 1001750 - 1000338 - | DNA repair protein RadA TERM 510 1001835 - 1001799 - R 100 -18.2 -4.05714 | gap 1, opp_overlap 1001805 AGTGGGAAGTATAAA CGA-ACACGGCACTGGC CGGA ACCAGTGCCGTGTCTCG CTGAGAAAACCGTCT TERM 511 1001805 - 1001828 + r 73 -13.9 -2.91264 | opp_overlap 1001799 AAGTATAAACGAACA CGGCACTGG CCGGAA CCAGTGCCG TGTCTCGCTGAGAAA trd_1035 1004307 - 1001854 - | ClpC ATPase TERM 512 1002792 - 1002824 + g 74 -10.6 -3.78022 | gap 1, opp_overlap 1002785, overlap 1002785 1002795 CGATCACACGCTCAT GC-AGCGCTTCCTCC ATAT GGAGTAGGCGCTCGC TTTCCTCGGTGTGCA TERM 513 1004509 - 1004475 - R 83 -15 -3.19463 | GCGAGGATCCAGGAA GGCGAAGCCCCCAG CTCTGGC CTGGGGGCTCCTCC CGAGCAATCGACGAT trd_1036 1005900 - 1004569 - | 30S ribosomal protein S1 trd_1037 1007174 - 1006056 - | soluble hydrogenase 42 kDa subunit TERM 514 1006565 - 1006513 - G 75 -4 -4.64766 | overlap 1006514 CGGAGATCCCAAAAA GCGCGT-GGATAGCTGGCCCGGTCGA TCA TCTCCCAGGCTCGCGATCCGACG-GC GACGATGACCAGCCC trd_1038 1008634 - 1007171 - | O-Antigen Polymerase family TERM 515 1008544 - 1008508 - G 75 -3.6 -4.79223 | gap 1, overlap 1008511 GGAGAGGACCAAAAA GGACGAGG-ACGATCGC GAGT GCGATCGCACCGATTCC TGCAACGAGTGCACC trd_1039 1008760 - 1009077 + | putative transcriptional regulator superfamily TERM 516 1010951 - 1010918 - g 71 -9.5 -3.68988 | overlap 1010938 GGTCATCGAACAGAA TGCCACCGCAGCC GAGGAGAT GGCTGCGCAGGCA GCTCAAGTCACCGAC trd_1040 1009302 - 1011293 + | methyl-accepting chemotaxis protein TERM 517 1011302 - 1011345 + T 100 -29.8 -3.03619 | opp_overlap 1011313, overlap 1011305 1011313 CGATTGAGCACCGCA CGAGCGGAGAAGGGACGGTC GATC GACCGTCCCTTCTCCGCTCC TCTTCACGACTGATT TERM 518 1011305 - 1011342 + T 100 -30.1 -2.74192 | opp_overlap 1011313, overlap 1011302 1011313 TTGAGCACCGCACGA GCGGAGAAGGGACGGTC GATC GACCGTCCCTTCTCCGC TCCTCTTCACGACTG TERM 519 1011334 - 1011313 - T 88 -15.9 -3.34043 | opp_overlap 1011313 1011305 1011302 CGCACGAGCGGAGAA GGGACGGTC GATC GACCGTCCC TTCTCCGCTCCTCTT TERM 520 1011313 - 1011334 + T 88 -15.9 -3.34787 | opp_overlap 1011313, overlap 1011305 1011302 CGCACGAGCGGAGAA GGGACGGTC GATC GACCGTCCC TTCTCCGCTCCTCTT moaA 1012409 - 1011360 - | molybdenum cofactor biosynthesis protein A trd_1042 1013235 - 1012531 - | GlcNAc-PI de-N-acetylase family hisS 1014610 - 1013222 - | histidyl-tRNA synthetase trd_1044 1015113 - 1014607 - | molybdenum cofactor biosynthesis protein B trd_1045 1016333 - 1015110 - | deacetylase TERM 521 1015764 - 1015750 - G 74 -10 -3.767 | GACCGACCGATGAAA CGGACT TCC AGTCCG ACTCGCCCACGATGG trd_1046 1016703 - 1016326 - | conserved hypothetical protein TIGR00252 rnhB 1017366 - 1016707 - | ribonuclease HII TERM 522 1016799 - 1016812 + g 70 -2.3 -4.63218 | GTCGATGCGACGGTG TGCCG TATC CAGCA TTTTCTTCCCAACCA rplS 1017749 - 1017378 - | ribosomal protein L19 trd_1049 1019723 - 1017849 - | 5-methyltetrahydrofolate S-homocysteine methyltransferase TERM 523 1019913 - 1019893 - g 71 -12.5 -3.29471 | opp_overlap 1019891 1019890 1019889 CGCCCAGGAGATGAA CCAGCGAGC GGG GCACGCTGG ACTCGGTTTTGCTCC trd_1050 1019888 - 1020829 + | group3 RNA polymerase sigma factor trd_1051 1020829 - 1022268 + | hypothetical protein trd_1052 1023189 - 1022275 - | CAAX amino terminal protease family trd_1054 1023261 - 1024142 + | stage 0 sporulation protein J glyS 1025540 - 1024134 - | glycyl-tRNA synthetase TERM 524 1025594 - 1025565 - R 93 -13.6 -4.1891 | overlap 1025567 CCTCCTGAAGACAAA CACAGCCCCTCG TTCTGG CGAGGGGCTGTC GAGCGATCACCAGTC TERM 525 1025592 - 1025567 - R 90 -16.2 -3.6944 | overlap 1025565 TCCTGAAGACAAACA CAGCCCCTCG TTCTGG CGAGGGGCTG TCGAGCGATCACCAG trd_1055 1026608 - 1025613 - | tyrosine recombinase xerD ald 1027754 - 1026627 - | alanine dehydrogenase TERM 526 1028273 - 1028285 + G 70 -2.6 -4.67982 | opp_overlap 1028268 1028267, overlap 1028267 1028274 CAAACCAAACCCCGC TGGC AACGG GCCG TTTTCTTCGGTGCCG trd_1057 1028021 - 1029337 + | putative membrane-associated zinc metalloprotease ispG 1029444 - 1030595 + | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase TERM 527 1031290 - 1031322 + G 85 -16.4 -3.09516 | gap 1 GCCGCTCGGCGCGAC CCGTCTC-GTCGCGA TCAG TCGCGGCCGAGACGG TTGCATCCTCGCCAC trd_1059 1030616 - 1031581 + | kinase, pfkB family TERM 528 1032047 - 1032032 - g 80 -4.7 -4.74103 | CTGGCAAGGCAAAAA CACGA TGATCC TCGTG CCCCGCTATGGGTCC trd_1061 1031568 - 1032746 + | PBS lyase HEAT-like repeat domain protein ppc 1035495 - 1032709 - | phosphoenolpyruvate carboxylase TERM 529 1034208 - 1034182 - G 72 -13 -3.16564 | overlap 1034188 1034190 GGCGCACCCTACCAA CGCAAAGAGCTC GGC GAGCGCTTCGCG GTACCGAGCTGCATC trd_1062 1035633 - 1036412 + | Bvg accessory factor trd_1063 1037546 - 1036425 - | putative sgc region protein sgcX fusA 1037633 - 1039795 + | translation elongation factor G TERM 530 1039821 - 1039852 + F 100 -22.4 -3.35679 | opp_overlap 1039821 1039822, overlap 1039822 TGGAATCACGAGGAA TCTGGGAGCTGGGC ACCG GCCCAGCTCCCAGG TTGTCGATGAGGGGA TERM 531 1039852 - 1039821 - f 100 -20.2 -3.25015 | opp_overlap 1039821 1039822, overlap 1039822 TGGAATCACGAGGAA TCTGGGAGCTGGGC ACCG GCCCAGCTCCCAGG TTGTCGATGAGGGGA TERM 532 1039822 - 1039851 + F 100 -23.7 -2.61264 | opp_overlap 1039822 1039821, overlap 1039821 GGAATCACGAGGAAT CTGGGAGCTGGGC ACCG GCCCAGCTCCCAG GTTGTCGATGAGGGG TERM 533 1039851 - 1039822 - f 100 -23.7 -2.54687 | opp_overlap 1039821 1039822, overlap 1039821 GGAATCACGAGGAAT CTGGGAGCTGGGC ACCG GCCCAGCTCCCAG GTTGTCGATGAGGGG trd_1065 1039873 - 1040301 + | ribonuclease HI TERM 534 1040433 - 1040412 - f 71 -8 -4.18018 | GCCCCTGACGCAAAA GTGCGCTG GCGTCT CAACGCAC GGTCAGGATGCTGGT TERM 535 1040621 - 1040655 + F 76 -9.9 -4.18762 | overlap 1040623 1040624 GTCTACTACCGCCCA CTCCGTACCCCTCGC CGCAA GCGAGGGGTACGCTC TTTTCGGTCACGCTT TERM 536 1040623 - 1040653 + F 91 -16.9 -3.69216 | overlap 1040621 1040624 CTACTACCGCCCACT CCGTACCCCTCGC CGCAA GCGAGGGGTACGC TCTTTTCGGTCACGC TERM 537 1040624 - 1040652 + F 100 -20.4 -2.81208 | overlap 1040623 1040621 TACTACCGCCCACTC CGTACCCCTCGC CGCAA GCGAGGGGTACG CTCTTTTCGGTCACG TERM 538 1040983 - 1041008 + F 100 -16.9 -4.30014 | ACCGCGTCAGGCTCG GCCTGTCGTCC CGAC GGACGGCAGGC TTTTCCGTTCGTGGA thrS 1041049 - 1042839 + | threonyl-tRNA synthetase trd_1068 1043824 - 1042859 - | renal dipeptidase family protein trd_1069 1044704 - 1043835 - | putative methyltransferase trd_1070 1045582 - 1044698 - | N-acetylglucosamine-6-phoshatase or p-nitrophenyl phosphatase TERM 539 1045082 - 1045035 - G 75 -6.4 -4.4078 | gap 3, opp_overlap 1045036 1045072 1045076, overlap 1045036 1045037 TCCTCTGAAGGAAAA GTGCGATCCGCGTTCGTCGC-GA TCCAG TCAGC-ACCATCGCGGATCGC-C AACGTGGCGATCTTG TERM 540 1045076 - 1045094 + g 77 -13.2 -3.34455 | opp_overlap 1045037 1045035 1045036, overlap 1045072 GTCAGCACCATCGCG GATCGCCA ACG TGGCGATC TTGAGTTTCTCGTAG TERM 541 1045323 - 1045355 + g 71 -9.7 -3.72324 | opp_overlap 1045317, overlap 1045324 CCGAGACGAGCGAGC TTCGCCGCGTACTCC TCG GGCGTCCGCGTCGAG TTATTCGTCACCATG trd_1071 1045636 - 1046850 + | probable peptidic bond hydrolase trd_1072 1047588 - 1046854 - | domain of unknown function protein trd_1073 1048459 - 1047605 - | putative lipoprotein trd_1074 1049509 - 1048652 - | ABC-2 type transporter superfamily trd_1075 1050260 - 1049466 - | multidrug ABC transporter, ATP-binding protein trd_1076 1050708 - 1050247 - | possible transcriptional regulatory protein TERM 542 1050382 - 1050367 - G 78 -10.4 -3.96624 | CAGCCGGACGAGAAA GGCACG CCGC CGTGCC TGCCATTCGCGCAAC trd_1077 1050752 - 1051528 + | hypothetical protein trd_1079 1051653 - 1052765 + | tRNA methyl transferase moaC 1053253 - 1052753 - | molybdenum cofactor biosynthesis protein C trd_1080 1054978 - 1053623 - | aminotransferase, class III TERM 543 1053769 - 1053800 + g 74 -5 -4.45945 | overlap 1053771 1053789 1053790 1053796 GCGTCGCCGCCTCCA GCTTCGGCCCCAGT TTGA ACTCGGGCGGGAAC TTTTCCTTGCTCGCT TERM 544 1055581 - 1055533 - g 77 -13.2 -3.40867 | overlap 1055530 1055534 TGATCGAGCAACCAA CCGACGGTGACCGCTCG-GTCGTC CGG GTCGGCTCGA-CGGTCACCATCGA GATCGATGGTGAAAT TERM 545 1055580 - 1055534 - g 74 -14.5 -2.64199 | overlap 1055530 1055533 GATCGAGCAACCAAC CGACGGTGACCGCTCG-GTCGTC CGG GTCGGCTCGA-CGGTCACCATCG AGATCGATGGTGAAA trd_1081 1055292 - 1055762 + | transcription elongation factor greA trd_1082 1055776 - 1056255 + | putative YbaK / prolyl-tRNA synthetases associated domain trd_1083 1057146 - 1056265 - | hypothetical sugar kinase trd_1084 1057869 - 1057183 - | protein jag trd_1085 1058850 - 1057912 - | inner membrane protein oxaA trd_1086 1059104 - 1058895 - | conserved hypothetical protein TIGR00278 rnpA 1059490 - 1059101 - | ribonuclease P protein component rpmH 1059668 - 1059498 - | ribosomal protein L34 TERM 546 1059735 - 1059707 - R 100 -8.8 -5.36441 | gap 1, opp_overlap 1059708 1059717, overlap 1059709 GTCCGACACAAAAAA GT-CCGCGCCGGC GTTT GCCGTCACGGCAC GCCCATTATAACACG trd_1089 1060918 - 1059761 - | beta-lactamase TERM 547 1061169 - 1061195 + G 79 -4.3 -4.87626 | CTGCGAACACTGGTC GCCGTCGTG CAGGCTGAT CTCGGCGGC TTTTTCGTCTTCGAC trd_1090 1061106 - 1063553 + | GAF domain protein TERM 548 1063987 - 1064014 + G 70 -14.1 -2.52543 | GCGATGCCATCCCAC TCGGCGCGGCC ATCATC GGCCTCGCCGA TGCCTTCGACACGAT trd_1091 1063554 - 1064849 + | response regulator trd_1092 1066729 - 1065467 - | putative major facilitator superfamily TERM 549 1065826 - 1065779 - G 70 -5.6 -4.25104 | gap 2, overlap 1065802 1065806 GGCGCTCCACGAAAA GCCGATG-A-CCAGCGCCGAGA AAAGCA CCCCGGCGGTGGATGCACCGAC GACAAGCAACAGCAG TERM 550 1067254 - 1067279 + H 100 -17.6 -4.13767 | GGTACCGCGGGTGAA CCCCGCCCTC AGAGGA GAGGGCGGGG TTTTCCGATCGAGCA TERM 551 1067959 - 1067991 + G 71 -11.9 -3.24747 | overlap 1067960 CTCAGTCTCTATGTG CGCTTCCCGCTCGAG GGA CGCGAGCGAGAAGCC TTGCTCGTCTGGACA TERM 552 1067960 - 1067990 + G 77 -15.4 -2.54634 | overlap 1067959 TCAGTCTCTATGTGC GCTTCCCGCTCGAG GGA CGCGAGCGAGAAGC CTTGCTCGTCTGGAC ileS 1067329 - 1070508 + | isoleucyl-tRNA synthetase trd_1094 1070505 - 1071266 + | hypothetical protein TERM 553 1071748 - 1071764 + G 74 -5 -4.53034 | TTCGCGGAGATTCAG CGCCGC TATCC GCAGCG TTTTCGTTGTCTCGC trd_1095 1071448 - 1072449 + | Amidohydrolase family trd_1096 1072452 - 1073642 + | 6-phosphofructokinase isozyme 1 trd_1097 1073996 - 1073703 - | Antibiotic biosynthesis monooxygenase domain protein murI 1074242 - 1074979 + | aspartate racemase trd_1099 1075476 - 1075937 + | hypothetical protein trd_1100 1075949 - 1077388 + | putative FesM trd_1101 1077402 - 1077965 + | hypothetical protein TERM 554 1078522 - 1078579 + G 84 -17.9 -2.73483 | gap 2 ACTGCGCTATCTCAT CCGCGATGAGGCGCTCGAGCCAGCTCG CCTCGC CGAGCTC-CTCGAGCGCCTCGTC-CGA TGATTCGAGTCCCGT trd_1102 1077962 - 1078582 + | senC homolog trd_1103 1080041 - 1078647 - | taurine--pyruvate aminotransferase TERM 555 1080270 - 1080252 - H 82 -4.4 -5.0538 | overlap 1080253 CTGCATTCCAAAAAA GCGAGCGC TCA GCGGTCGA ACAGTGAAGAGGATC trd_1104 1080623 - 1080736 + | hypothetical protein trd_1105 1080898 - 1085424 + | glutamate synthase [nadph] large chain precursor TERM 556 1085478 - 1085449 - T 100 -24.3 -3.33162 | opp_overlap 1085449 CATCCCATGCCACAA CCGGCCCCCGGGA GCAT CCCCGGGGGCCGG TTGGTGGGTGGGGAT TERM 557 1085449 - 1085478 + T 100 -23.6 -3.18383 | opp_overlap 1085449 CATCCCATGCCACAA CCGGCCCCCGGG AGCATC CCCGGGGGCCGG TTGGTGGGTGGGGAT trd_1106 1085860 - 1085510 - | Nitrogen regulatory protein P-II amt 1087149 - 1085857 - | ammonium transporter TERM 558 1087100 - 1087078 - G 81 -4.8 -4.96848 | overlap 1087079 CCCCCCATAGAAAAA CCCTAATGCC GGG GTCATCAGGA GGACCAATGCTGTCG trd_1108 1087321 - 1087172 - | hypothetical protein TERM 559 1087315 - 1087345 + g 83 -14.6 -3.28712 | opp_overlap 1087293 1087305 1087303 1087332, overlap 1087316 1087319 GAAGACCGCGCTGCC CCGGCACGGTGCGC AAA GCGCACCGGGTCGC TTATGCACGCAGCAC TERM 560 1087316 - 1087344 + g 86 -18.1 -2.57132 | opp_overlap 1087293 1087305 1087303 1087332, overlap 1087315 1087319 AAGACCGCGCTGCCC CGGCACGGTGCGC AAA GCGCACCGGGTCG CTTATGCACGCAGCA TERM 561 1087319 - 1087341 + g 74 -14.8 -2.59431 | opp_overlap 1087305 1087303 1087332, overlap 1087316 1087315 ACCGCGCTGCCCCGG CACGGTGCGC AAA GCGCACCGGG TCGCTTATGCACGCA trd_1110 1087478 - 1088740 + | putative MFS transporter mutS 1091358 - 1088704 - | DNA mismatch repair protein MutS trd_1111 1091357 - 1091566 + | hypothetical protein trd_1112 1091928 - 1092209 + | hypothetical protein trd_1113 1092217 - 1094133 + | putative sodium/solute symporter TERM 562 1094150 - 1094181 + F 100 -25.2 -3.6502 | opp_overlap 1094142 1094139 GAAATCACCGGTCGC GCCGGGGCCCAGGC GCGC GCTTGGGCCCCGGC TTTCCGTCCCGGATC TERM 563 1094336 - 1094319 - g 72 -11.3 -3.53811 | opp_overlap 1094318 1094316 CTCACTCGCGGGAAA TCGACCG TCAT CGGTCGA CTCTTCCATCTGGCT trd_1115 1094220 - 1094480 + | hypothetical protein trd_1114 1095153 - 1094467 - | DNA polymerase III epsilon subunit trd_1116 1097057 - 1095150 - | CBS domain protein TERM 564 1096162 - 1096113 - G 77 -8.5 -4.27117 | gap 1, opp_overlap 1096120, overlap 1096114 GCGCGACAAGAGAAA CGGGATCAGCTGGCGTTGGGCTTG CTC CAGGACCAACGCCAAGCGTTCC-G TATGCGTTTCCCGTT trd_1117 1097154 - 1099115 + | acetyl-coenzyme A synthetase TERM 565 1099163 - 1099186 + G 77 -11 -3.77087 | GCCGTGCCTTCATCG GAGGGGCCTT CGTC AGGGCTCCTC TTTGGGTCTTGGCTG TERM 566 1099365 - 1099401 + G 95 -10.7 -4.72986 | overlap 1099350 CTGGCGTTCCGTAGC GGTCGCCAGTTTGGCAG TCG CTGCCTATCAGCCGACC TTTTTCCTCGGCGTG trd_1118 1099096 - 1100076 + | YwfM trd_1119 1100073 - 1102430 + | penicillin acylase II trd_1120 1103959 - 1102532 - | hypothetical protein trd_1121 1105886 - 1103979 - | glycosyl transferase, group 2 family protein hemA 1107244 - 1106024 - | glutamyl-tRNA reductase TERM 567 1106534 - 1106515 - G 78 -4.2 -4.82901 | gap 1, overlap 1106485 TCGTCGCGACAAAAA CGACATCCG CTT CGG-TGACG AGTCGAGGCCACTCG hemL 1108533 - 1107241 - | glutamate-1-semialdehyde-2,1-aminomutase TERM 568 1107916 - 1107874 - G 74 -2 -4.83615 | gap 2, overlap 1107875 CAGGCGCGACAAAAA GCCAGCAGCCGGTGGAAC CACTCCCAT GTTCC--CGGCAACCGGC TCCACGATGACCGCC hemB 1109563 - 1108541 - | delta-aminolevulinic acid dehydratase hemD 1111242 - 1109560 - | porphobilinogen deaminase trd_1126 1111445 - 1112620 + | sulfide dehydrogenase folE 1113257 - 1112634 - | GTP cyclohydrolase I trd_1128 1114767 - 1113904 - | CDP-alcohol phosphatidyltransferase family trd_1129 1115542 - 1114757 - | 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase trd_1130 1115742 - 1115560 - | hypothetical protein trd_1131 1115847 - 1117451 + | cold-shock dead-box protein a trd_1132 1117680 - 1118426 + | conserved hypothetical protein TIGR01033 TERM 569 1118459 - 1118486 + F 100 -21.4 -3.32022 | opp_overlap 1118430 1118461 GGTCGAATCGTGCAA CAGCGCTCGGTG CCTG CACCGAGCGCTG TTCGTCTCTCGAAAG TERM 570 1118484 - 1118461 - f 89 -18.2 -3.04322 | opp_overlap 1118459, overlap 1118430 TCGAATCGTGCAACA GCGCTCGGTG CCTG CACCGAGCGC TGTTCGTCTCTCGAA trd_1133 1118603 - 1119097 + | hypothetical protein TERM 571 1119694 - 1119721 + G 70 -6.2 -4.21194 | gap 1, overlap 1119695 AACCTCTGGCGCTTC ACGCGCGATCTGG GAG CC-GATCTCGCGA TTTTCAGTGGTGGCA trd_1134 1119094 - 1120230 + | putative pyridoxal phosphate-dependent enzyme TERM 572 1120281 - 1120326 + T 91 -16.7 -3.59202 | opp_overlap 1120291 GAGTCAGTCGGATTC CGCGAACGGACGCGCGCCTCG TTGC TGCGGCGCGCGTCCGTCCCAG TTCTGTCTGGCGCTG trd_1135 1121439 - 1120345 - | sugar ABC transportor, ATP-binding protein TERM 573 1120787 - 1120812 + g 77 -12.7 -3.39895 | gap 1 TCGTAGAGGTTTTCC GGTGTG-TCCAG CTG CTGGAGCACACC TTGATTCATCACCGC trd_1136 1122375 - 1121530 - | inner membrane ABC transporter permease protein ycjP trd_1137 1123321 - 1122377 - | putative sugar uptake ABC transporter permease protein trd_1138 1124854 - 1123403 - | putative sugar uptake ABC transporter periplasmic solute-binding protein precursor trd_1139 1125112 - 1127076 + | acetyl-coenzyme A synthetase TERM 574 1127156 - 1127196 + G 73 -12.6 -3.40403 | gap 1 GCCGGTCTACCTGTA TCGCGGACCGTT-GGCGAG CCTC CTCGCCTGGCGGTGCGTGA TTCTCCTCACCACCA trd_1140 1127073 - 1127594 + | conserved hypothetical protein TIGR00026 trd_1141 1127708 - 1130536 + | transaldolase and glucose-6-phosphate isomerase bifunctional protein gnd 1130559 - 1131482 + | 6-phosphogluconate dehydrogenase (decarboxylating) TERM 575 1132904 - 1132936 + G 81 -13.4 -3.60792 | gap 1 CCGATCACGCAGATC CTCC-GCGGGTGGGC GGAG GCCCCTCCGCCGGAG TTTCCCAATTACGAC zwf 1131479 - 1133023 + | glucose-6-phosphate 1-dehydrogenase trd_1144 1133049 - 1134203 + | hypothetical protein pgl 1134216 - 1135001 + | 6-phosphogluconolactonase trd_1145 1136176 - 1134998 - | putative permidine/putrescine ABC transporter,periplasmic spermidine/putrescine-binding protein trd_1147 1136282 - 1136692 + | Protein of unknown function (DUF420) superfamily trd_1148 1136700 - 1137809 + | phosphonoacetate hydrolase trd_1149 1137806 - 1138765 + | probable nodulation ATP-binding ABC transporter protein trd_1150 1138773 - 1139495 + | hypothetical protein trd_1151 1140314 - 1139499 - | putative conserved hypothetical protein TIGR00104 TERM 576 1140103 - 1140058 - G 80 -14.7 -3.05384 | gap 1, overlap 1140073 GGCCGGGCGACCGAA CGGAGTCCGAACACACCGCGTC GTC GACGCGCCG-GATCGTACTCCG GTCGCACCAACTCCA trd_1152 1141796 - 1140339 - | nitrate reductase (NAD(P)H) TERM 577 1140995 - 1140977 - G 72 -3.1 -4.63218 | gap 1, overlap 1140980 CCGCCTCCAACAAAA GATC-GCG CAAG CGCAGACC GATCCACTCGCCGGT trd_1153 1142035 - 1141793 - | hypothetical protein trd_1154 1142584 - 1143060 + | hypothetical protein trd_1155 1143057 - 1143431 + | hypothetical protein trd_1156 1144133 - 1143462 - | ribosomal protein L25, Ctc-form trd_1157 1146118 - 1144895 - | multidrug-efflux transporter TERM 578 1145686 - 1145652 - G 70 -13.6 -2.64735 | opp_overlap 1145651 1145652 ATGCCAGCGATAGCA GGAGCGACGATCGC CGCGAGC GCGATCATCGCGCC ATTAGTTCCCATCAG trd_1158 1146350 - 1146928 + | transcriptional regulator, TetR family protein TERM 579 1146995 - 1146957 - f 75 -13.7 -3.02144 | opp_overlap 1146955 GCACGGCGTCGAAGA GCGAGCCGGGGTACAGG GTCGG CCAAAGCCCCGGCTCGC ACTCCTTCCCGACTC TERM 580 1147478 - 1147513 + G 81 -3.3 -5.00616 | gap 3, overlap 1147480 TTGGAACGCGATCCT CG-CGCGCCACGGCCGGA GTT TCTGGC--TGGCGAGTCG TTTTTTGCCGCGCGA trd_1159 1147413 - 1148351 + | phytoene synthetase TERM 581 1148669 - 1148681 + G 71 -9.1 -3.69256 | overlap 1148657 1148655 GCGGCGCGCCTGCAA CCAGC TGC GCTGG TTCTCTTCGCTCCAT trd_1160 1148327 - 1149154 + | hypothetical protein trd_1161 1149151 - 1150329 + | glycosyl transferase, group 2 family protein TERM 582 1150444 - 1150484 + GF 88 -9.5 -4.62475 | overlap 1150449 TAGCTTCGGCATGAA GTGGGGCGGCGTCGCCTAC ATC GTGCTCGGCGCTGCCGCGC TTTTCGTTTATGCCT TERM 583 1151735 - 1151700 - gf 100 -22 -2.62983 | TCCAGTTGGAGACCA CCGGCTCCCCGATCGT CGTC ACGATCGGAGAGCCGA TGGTAGTCACGAGCC trd_1162 1150295 - 1151866 + | Protein of unknown function (DUF422) family trd_1163 1151867 - 1153408 + | phytoene dehydrogenase ispH 1153405 - 1154388 + | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase TERM 584 1155190 - 1155200 + G 77 -8.2 -4.25104 | ACGAGCGAGCGGCTA CGGG TTG CCCG TTTTACTGGAGCCAC TERM 585 1155603 - 1155569 - g 72 -3.6 -4.68593 | gap 2 CTGACCAGTGAAAAA CGGTTG-GGAC-GCGA TCCAC TCGCCATCCTCGACCG CCAGCAGCAGGCTGA trd_1165 1154462 - 1157401 + | glycolate oxidase subunit trd_1167 1157440 - 1157865 + | hypothetical protein dnaA 1159256 - 1157859 - | chromosomal replication initiator protein DnaA TERM 586 1158538 - 1158562 + g 75 -4.3 -4.64861 | overlap 1158534 TAGAGTGCATTGAAC GTATGGAAGAA CTC TTCTTGCGTGC TTTCTTTTCCGGCGA trd_1168 1159376 - 1159513 + | hypothetical protein trd_1169 1159578 - 1160042 + | regulatory protein, MarR trd_1170 1160039 - 1161667 + | putative drug transport protein TERM 587 1161726 - 1161678 - f 93 -17.5 -3.62275 | gap 1 ACTGATGAGTCGAAA GAGTCGTTCCGGCCAGTCGCTC TGCAAT GA-CGGCTGGCCGGAACGTCCC CAGCGGGCGAAAGAG TERM 588 1162122 - 1162075 - f 73 -9.1 -3.82604 | gap 2, opp_overlap 1162074, overlap 1162076 CGAGTGAACGAAGAA CGCGCGGGAGCTTTCCGCTGCCG CACA CGGCAGCGGGA-G-TCCAAAGCG ATGGTTCGACCTGTG trd_1171 1162150 - 1162716 + | OsmC-like protein trd_1172 1162774 - 1163673 + | putative thiosulfate sulfurtransferase precursor trd_1173 1163764 - 1164198 + | NifU family protein trd_1174 1164243 - 1165640 + | selenium-binding protein TERM 589 1165655 - 1165696 + F 88 -17.3 -3.06492 | gap 1, opp_overlap 1165659, overlap 1165661 1165664 AGGCGATGACGCGAC CGAACGGGAGCGCCCCGCCA CTC TGGCGGGGCGCTCGTCT-CG TGTTCGGCTGAATGG TERM 590 1165691 - 1165659 - f 85 -16.4 -3.07113 | gap 2, opp_overlap 1165655 1165661 1165664 GATGACGCGACCGAA CGGGAGCGCCCCGCCA CTC TGGCGGGGCGCT--CG TCTCGTGTTCGGCTG TERM 591 1165661 - 1165691 + F 100 -22.6 -2.92026 | opp_overlap 1165659, overlap 1165655 1165664 TGACGCGACCGAACG GGAGCGCCCCGCCA CTC TGGCGGGGCGCTCG TCTCGTGTTCGGCTG TERM 592 1165664 - 1165688 + F 100 -22.9 -2.70232 | opp_overlap 1165659, overlap 1165661 1165655 CGCGACCGAACGGGA GCGCCCCGCCA CTC TGGCGGGGCGC TCGTCTCGTGTTCGG trd_1175 1165719 - 1166387 + | hypothetical protein trd_1176 1167356 - 1166391 - | phosphoesterase PHP, N-terminal TERM 593 1166505 - 1166484 - G 77 -12.3 -3.6279 | overlap 1166472 AAAGCGGCGTAACAA TCCCGCGAT CGAC ACCGCGGGA TACGGTATCGGATCG trd_1177 1167432 - 1168190 + | conserved hypothetical protein TIGR00486 glmM 1168220 - 1169575 + | phosphomannomutase trd_1179 1169583 - 1170074 + | Protein of unknown function (DUF402) family trd_1180 1170157 - 1170846 + | transcriptional regulator, MerR family protein trd_1181 1170883 - 1171098 + | hypothetical protein trd_1182 1172216 - 1171104 - | Alanine racemase, N-terminal domain family purN 1172852 - 1172229 - | phosphoribosylglycinamide formyltransferase TERM 594 1173941 - 1173926 - g 79 -10.4 -4.19624 | opp_overlap 1173936 GACCCGGAACAGAAA CGCCGA CTGA TCGGCG AAGAGTTCGTCCGCG trd_1184 1173002 - 1174585 + | GMP synthase (glutamine-hydrolyzing) purD 1174589 - 1175902 + | phosphoribosylamine--glycine ligase trd_1185 1176656 - 1175871 - | nitrate/nitrite response regulator protein trd_1187 1177288 - 1176755 - | putative hydrolase, NUDIX family trd_1188 1177790 - 1177677 - | hypothetical protein TERM 595 1177892 - 1177917 + r 70 -5.4 -4.41895 | gap 1, overlap 1177893 ATCGATTCCGGTTCA G-CGTCCGCAC GAGTA GTTCGGACGTC TTTTCGTTCCCCCTT TERM 596 1177893 - 1177915 + r 71 -9.1 -3.8125 | overlap 1177892 TCGATTCCGGTTCAG CGTCCGCAC GAGTA GTTCGGACG TCTTTTCGTTCCCCC ade 1179923 - 1178214 - | adenine deaminase trd_1191 1180375 - 1179941 - | hypothetical protein TERM 597 1180365 - 1180349 - G 71 -8 -4.19238 | TGGGTAAGCCCAAAA TCCTGC CTGGC GCAGGA TGGATACCACTGGTT trd_1192 1180823 - 1180398 - | putative MerR-family transcriptional regulator trd_1193 1180929 - 1181735 + | conserved hypothetical protein TIGR00259 recJ 1183541 - 1181856 - | single-stranded-DNA-specific exonuclease RecJ trd_1195 1184357 - 1183641 - | transcriptional repressor trd_1196 1184448 - 1185407 + | Ser/Thr protein phosphatase family protein trd_1198 1185404 - 1186489 + | hypothetical protein trd_1197 1187520 - 1186486 - | isoprenyl synthetase trd_1199 1187684 - 1188376 + | putative Zn-dependent protease TERM 598 1188405 - 1188436 + F 71 -12.3 -3.19602 | opp_overlap 1188404 1188401, overlap 1188404 GCAGGACGAAAGCAG GGCGTCCGGAG CGTGAGCGTC CTCCGGGCGCC TCTTCATCTCGAGCG trd_1200 1188543 - 1189007 + | hypothetical protein clpX 1190367 - 1189096 - | ATP-dependent Clp protease, ATP-binding subunit ClpX TERM 599 1190199 - 1190215 + g 70 -11.5 -3.42702 | overlap 1190198 TGGGAGCGGGAGCCG GGCGCCG CGC CGGTGCC TCTTCTTGAATGATC clpP 1191011 - 1190394 - | Clp protease TERM 600 1190642 - 1190664 + g 77 -13.4 -3.34895 | TCAGAACCCGCGAGT GGGGAAGGGC GAA GCGCTTCCCC TTCGTTCCCGCTGCG tig 1192504 - 1191032 - | trigger factor TERM 601 1192873 - 1192897 + G 71 -12.1 -3.23692 | opp_overlap 1192891 CGCGGACTGGCAGCT CGTTCCGTGGG GCA CCAACGGGACG TTCGTCGTGCTGCTC trd_1204 1192754 - 1193512 + | hypothetical protein trd_1205 1193872 - 1194318 + | carbon-monoxide dehydrogenase trd_1206 1194362 - 1194832 + | [2Fe-2S] binding domain protein TERM 602 1195337 - 1195321 - g 75 -9.3 -3.99324 | GTCGACCAGGAGAAA GCGCTGG AGC CCGGCGC ACCGCAGCTCTACGA trd_1207 1194889 - 1197240 + | oxidoreductase, large chain trd_1208 1197291 - 1198157 + | carbon monoxide dehydrogenase medium chain TERM 603 1198357 - 1198368 + G 70 -5.8 -4.26076 | TATGCGACACCAGCC TGGC GACC GCCA TTTTCCTGGCCCTCA trd_1209 1198278 - 1199174 + | putative ATPase, AAA family trd_1210 1199219 - 1200472 + | VWA domain containing CoxE-like protein trd_1211 1200488 - 1200808 + | putative xanthine dehydrogenase accessory factor subfamily, putative trd_1212 1200805 - 1201593 + | putative xanthine dehydrogenase accessory factor subfamily, putative trd_1213 1201615 - 1202223 + | hypothetical protein TERM 604 1202661 - 1202626 - gf 74 -10.4 -3.76224 | gap 1, opp_overlap 1202617 GGTCCAGCGAGGAAA GCACCGCAGTCGAGTGG TTC CCGCTCGAC-GCATTGC CCCCGCTTGCCTTTC trd_1214 1202220 - 1202729 + | putative nudix/mutt family protein trd_1215 1202702 - 1205131 + | carbon-monoxide dehydrogenase, large subunit TERM 605 1205226 - 1205173 - T 84 -14.5 -3.3334 | opp_overlap 1205178, overlap 1205175 1205183 AAGCGCAGCCGACAA GATCAGCACATGACCCGAGCGACCC CCAA GGATCGCTCGGGTCACTCCCTGTGC TCGCACGACGCGTCT TERM 606 1205224 - 1205175 - T 86 -15.7 -3.23393 | opp_overlap 1205178, overlap 1205173 1205183 GCGCAGCCGACAAGA TCAGCACATGACCCGAGCGACCC CCAA GGATCGCTCGGGTCACTCCCTGT GCTCGCACGACGCGT TERM 607 1205216 - 1205183 - T 100 -23.3 -2.87146 | opp_overlap 1205178, overlap 1205175 1205173 GACAAGATCAGCACA TGACCCGAGCGACCC CCAA GGATCGCTCGGGTCA CTCCCTGTGCTCGCA trd_1216 1205473 - 1205282 - | hypothetical protein trd_1217 1206217 - 1205498 - | heme exporter protein C trd_1218 1206920 - 1206252 - | heme exporter protein B ccmA 1207663 - 1206917 - | heme ABC exporter, ATP-binding protein CcmA trd_1220 1208040 - 1207660 - | hypothetical protein trd_1221 1208525 - 1208040 - | CcmH, cytochrome c-type biogenesis protein CcmH trd_1222 1210554 - 1208569 - | cytochrome C-type biogenesis protein TERM 608 1209815 - 1209787 - G 81 -13.2 -3.65522 | overlap 1209813 CACCGAGTGCAAGAA CGCTGTTGCCGT CAACC ACGGCAACAGGG CCAGATTCTCGACCG TERM 609 1210186 - 1210156 - G 91 -9.7 -4.8269 | opp_overlap 1210161, overlap 1210158 GACAAGGAGGAAAAA CGTGACGATGGCC AAAAG GGTCATCGTCATG TACGGAAGCAGTGCA TERM 610 1210376 - 1210364 - G 78 -7.7 -4.36931 | overlap 1210352 TAAGCGAGACGAAAA TCGTG TCG CACGA ACGAAATGACCAAGA trd_1223 1211017 - 1210571 - | cytochrome c-type biogenesis protein CycJ trd_1224 1211529 - 1211050 - | hypothetical protein TERM 611 1211221 - 1211202 - G 74 -12.8 -3.28712 | CGCCGCGGGGTAGAA GCCCGCCG GTGG CGGCGAGC GCGAGGAGGCCAGCC trd_1225 1212150 - 1211542 - | c-type cytochrome biogenesis protein/thioredoxin dsbE TERM 612 1211680 - 1211659 - G 80 -12.3 -3.71848 | TGGGCCGATGAAGAA GGTCTCCGG GACA CCGGAAACC CCGTAGTCGATCGTG murA 1213456 - 1212182 - | UDP-N-acetylglucosamine 1-carboxyvinyltransferase TERM 613 1212958 - 1212928 - G 81 -9.7 -4.25283 | AGGCTGCCATCAAAA GATTTTCCGTGCC GGTAT GGCTCGGATAATC CATGTAGATCTCGCA atpC 1213923 - 1213468 - | ATP synthase F1, epsilon subunit atpD 1215358 - 1213937 - | ATP synthase F1, beta subunit TERM 614 1215097 - 1215073 - G 76 -9.9 -4.12188 | overlap 1215074 CGACCACGTTGAAAA TCCGGCCCAGC GTC GCTGGACCGAC TGGCACCTTGATCGG TERM 615 1215096 - 1215074 - G 72 -13.4 -3.06991 | overlap 1215073 GACCACGTTGAAAAT CCGGCCCAGC GTC GCTGGACCGA CTGGCACCTTGATCG atpG 1216271 - 1215381 - | ATP synthase F1, gamma subunit atpA 1217826 - 1216294 - | ATP synthase F1, alpha subunit atpH 1218387 - 1217845 - | ATP synthase F1, delta subunit atpF 1218896 - 1218399 - | ATP synthase F0, B subunit atpE 1219262 - 1219017 - | ATP synthase F0, C subunit atpB 1220217 - 1219327 - | ATP synthase F0, A subunit trd_1235 1220466 - 1220221 - | hypothetical protein pyrG 1222166 - 1220511 - | CTP synthase trd_1237 1223004 - 1222198 - | hypothetical protein trd_1238 1223792 - 1223124 - | regulatory protein recX trd_1239 1223852 - 1224484 + | Uncharacterized ACR leuS 1226981 - 1224492 - | leucyl-tRNA synthetase trd_1241 1227298 - 1227185 - | hypothetical protein TERM 616 1227289 - 1227265 - G 75 -12.2 -3.44051 | gap 1 TCTCCATGACGAGAA CCGGTCTCACC TCGC GGTG-GACCGG CCGACCCACTCTCGT TERM 617 1227542 - 1227552 + H 79 -6.8 -4.57073 | overlap 1227536 1227535 TCAGCTCCTGCACGT TCGC TGT GCGA TTTTTGCCAGGAATC TERM 618 1228891 - 1228864 - g 72 -13.5 -3.09492 | overlap 1228876 1228877 TGGGGAAGTCGAAGA CGAGAGGGGAA ACCGCG CTCCCCTCTCG GCTGGTCGGGCAGCG TERM 619 1229083 - 1229039 - g 72 -12.8 -3.08813 | gap 1, overlap 1229049 1229051 GCTCAGGCGAAGAGA CGTCGGGAAAC-AGGCCGCGG ACGG CCGCGTCCTCGTCGCCAGACG GGACTGAAAACGAGC trd_1243 1227692 - 1229104 + | MiaB-like tRNA modifying enzyme YliG, TIGR01125 trd_1244 1230569 - 1229919 - | CDP-alcohol phosphatidyltransferase family TERM 620 1230302 - 1230283 - G 76 -5.6 -4.56607 | overlap 1230284 CCATCAACGAGAAAA CCGCGCGT CAGC ACGAGCAG CGGTGCCCAGACGCC TERM 621 1230551 - 1230533 - G 70 -5.8 -4.29738 | overlap 1230536 CGATACCGAGGAAAA GGAGGGCG ATG CGCCCAGC GGTGATCGCGTTCGC trd_1245 1231591 - 1230593 - | Protein of unknown function (DUF1648) family trd_1246 1233046 - 1231652 - | putative post-translocation molecular chaperone trd_1247 1233428 - 1233108 - | 30S ribosomal protein S18 TERM 622 1233343 - 1233374 + g 75 -14.4 -2.95298 | gap 1 GTCGCTGCAGAGCGA GCGG-GGCGCCCGGA CTC TCCGGTCGCTTCCGC TGTCTGCTCGGTCGC trd_1248 1233908 - 1233453 - | single-stranded DNA binding protein rpsF 1234261 - 1233944 - | ribosomal protein S6 TERM 623 1234425 - 1234397 - R 84 -16.7 -2.87468 | GGCGAGTATACCAGA CGAGCCCCAGAGC AAT GCTCCAGGGCCCG TACCTCGAGAAAGCC trd_1250 1234743 - 1234456 - | hypothetical protein thrB 1235923 - 1234976 - | homoserine kinase TERM 624 1235359 - 1235335 - G 75 -7.7 -4.3129 | GAGCCAGGACCAAAA GCGCGGTGTGC GCT GCAGTCCGCAC GGCAGTGACCCGGCG thrC 1237187 - 1235913 - | threonine synthase trd_1253 1238197 - 1237235 - | oligopeptide transport system permease protein appC trd_1254 1239182 - 1238223 - | oligopeptide transport system permease protein appB TERM 625 1239240 - 1239213 - R 100 -20.6 -4.96848 | CCTGTTAGAGAAAAA GGGGACGGGGCG CGCT CACCCCGTCCCC ACCACCCGCGCTAGC trd_1255 1241188 - 1239251 - | peptide/opine/nickel uptake family ABC transporter, periplasmic substrate-binding protein trd_1256 1241536 - 1241285 - | hypothetical protein trd_1257 1242849 - 1241734 - | hypothetical protein trd_1258 1244357 - 1242867 - | glycogen synthase glgC 1245663 - 1244377 - | glucose-1-phosphate adenylyltransferase TERM 626 1246353 - 1246395 + G 77 -14.8 -2.82516 | GTGTCCTCGTCGACC CCTGCTACGGTGGCGTGACT GCC AGTTTCGCCACCGTGGCCGA TGTCATACTGGCCGA accD 1245740 - 1246642 + | acetyl-CoA carboxylase, carboxyl transferase, beta subunit accA 1246639 - 1247460 + | acetyl-CoA carboxylase, carboxyl transferase, alpha subunit trd_1262 1247936 - 1247505 - | probable HspC2 heat shock protein TERM 627 1247748 - 1247717 - G 73 -14.4 -2.8294 | overlap 1247714 CACCGCGGAGAACGA CGCGATCGTCCTCG ACGA CGAGGTCCATCGCG GCTGGCTCCACCCCT trd_1263 1249147 - 1247963 - | peptidase, M50 family protein TERM 628 1248221 - 1248205 - G 71 -12.3 -3.21747 | overlap 1248216 CCATCGCATCAGCAA CGCGCAT GAG ATGCGCG ACATGCGCCAGCCGG pyrB 1249452 - 1250408 + | aspartate carbamoyltransferase TERM 629 1250432 - 1250462 + T 81 -7.6 -4.56775 | gap 2, overlap 1250434 GCCGACTGGACTCCT GA-TGC-CCCGCCC AGCGC GGGCGGGTGCGCTC TTTTTCCCAGCAGCT trd_1265 1251499 - 1250477 - | RNA polymerase sigma factor rpoD TERM 630 1250824 - 1250806 - G 79 -11.6 -3.93288 | opp_overlap 1250814 GTTGATCCAAGGAAA CGGCCCGC TGC GCGGCCCG GACGATCTGCGCGAT TERM 631 1252399 - 1252376 - g 71 -7.4 -4.07885 | overlap 1252377 CACCCGGCTCGAAAA CGCGCTCG ACGCCCAG CGAGCGCA GTTGGCACAACTGCG TERM 632 1253253 - 1253235 - g 79 -5.9 -4.59773 | overlap 1253237 GGTGATCTCGAAAAA CTCGCTC GGCAG GAGCGCG AACTGGCTCAGTTGC trd_1266 1251732 - 1254284 + | RecF/RecN/SMC N terminal domain protein trd_1267 1254385 - 1255794 + | putative protease/transporter trd_1268 1255823 - 1256620 + | mechanosensory protein 2 trd_1269 1257588 - 1256623 - | protease IV, signal peptide peptidase TERM 633 1257428 - 1257398 - G 80 -14.6 -3.06696 | TCGCCGGTCAACAGA CCGGCCCCACCGCG GAG CGCGATGGGCCCGC GGACACGGATCTCAG trd_1270 1258479 - 1257622 - | hypothetical protein trd_1271 1258451 - 1260997 + | hypothetical protein TERM 634 1261995 - 1262041 + G 70 -11.5 -3.31144 | TCTCTGTCAGCTTCT CCGCGCGATCCC-GTGGTCGACG CTC CGGCG-CAGCTGGGATAGCGCGG TTCTCGGCATGAGCG trd_1272 1260994 - 1262826 + | hypothetical protein trd_1273 1262834 - 1263508 + | two-component response regulator trd_1274 1263600 - 1265033 + | two-component sensor histidine kinase trd_1275 1265047 - 1265745 + | hypothetical protein TERM 635 1265768 - 1265802 + F 75 -12.1 -3.55444 | gap 1, overlap 1265763 1265772 TTGCCCTTCTCACTC CG-CCCGGGGAGGAGG GTTC CCTCCTCCCCGTCTCG TTTGCCGGATCGGCG TERM 636 1265772 - 1265797 + F 100 -20.5 -3.00704 | overlap 1265763 1265768 CCTTCTCACTCCGCC CGGGGAGGAGG GTTC CCTCCTCCCCG TCTCGTTTGCCGGAT dxs 1265922 - 1267811 + | 1-deoxy-D-xylulose-5-phosphate synthase TERM 637 1268158 - 1268146 - g 75 -3.4 -4.7373 | overlap 1268152 CGACGCGACCAAAAA GAAG ATCCG CTTC CTCGAGACGGTCGTG gidB 1267808 - 1268572 + | methyltransferase GidB trd_1278 1268577 - 1269935 + | putative pyridine nucleotide-disulphide oxidoreductase TERM 638 1269984 - 1269937 - f 71 -11.8 -3.18264 | overlap 1269939 1269942 CTCGCGAGGCATGAA GAGGACGGGCGCGAGCAGACTC GATC GAGTCGGCTCGCGCCCAGCAGG GCATCGCTCGATCCA TERM 639 1269982 - 1269939 - f 89 -18.8 -3.1552 | overlap 1269937 1269942 CGCGAGGCATGAAGA GGACGGGCGCGAGCAGACTC GATC GAGTCGGCTCGCGCCCAGCA GGGCATCGCTCGATC TERM 640 1269979 - 1269942 - f 100 -23.5 -2.77999 | overlap 1269939 1269937 GAGGCATGAAGAGGA CGGGCGCGAGCAGACTC GATC GAGTCGGCTCGCGCCCA GCAGGGCATCGCTCG trd_1279 1270296 - 1271306 + | dipeptide transport system permease protein dppB TERM 641 1271430 - 1271449 + G 72 -3.5 -4.70319 | CCCGCTCAACTTGCT GGGCG TGGTACTGAT CGCCC TTTTCCTTTTCCTCG trd_1280 1271308 - 1272216 + | inner membrane ABC transporter permease protein yddQ trd_1281 1272237 - 1273973 + | putative oligopeptide ABC transporter substrate-binding protein TERM 642 1273991 - 1274026 + F 100 -19.8 -4.25104 | opp_overlap 1273976, overlap 1273992 CGAGCGATCGCTGCG AGCCTCGTGAGCGCCA CGTC TGGTGCTCACGAGGCA TTTTGCTGAAGGGAG TERM 643 1273992 - 1274025 + F 100 -23.3 -3.14848 | opp_overlap 1273976, overlap 1273991 GAGCGATCGCTGCGA GCCTCGTGAGCGCCA CGTC TGGTGCTCACGAGGC ATTTTGCTGAAGGGA TERM 644 1274082 - 1274102 + G 78 -13.9 -3.27476 | overlap 1274084 GGTGCACAGTCGATG GTCGCGCCG CTC CGGCGCGTC TTACTCGTTCGACCT TERM 645 1274084 - 1274100 + G 83 -15.1 -3.20227 | overlap 1274082 TGCACAGTCGATGGT CGCGCCG CTC CGGCGCG TCTTACTCGTTCGAC trd_1282 1274052 - 1274921 + | putative arginine deiminase trd_1284 1274944 - 1275987 + | putative hydroxyindole O-methyltransferase trd_1283 1277141 - 1275945 - | putative hydrolase trd_1285 1277407 - 1278408 + | undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase trd_1286 1278401 - 1279330 + | hypothetical protein TERM 646 1279544 - 1279573 + F 93 -17.9 -3.7732 | overlap 1279545 1279547 CTCCGAGGGTACTGG GGAGCGAGCAGGG AAAT CCCTGCTCGCTCG TTGTTCGTGTGGCAG TERM 647 1279545 - 1279572 + F 100 -21.4 -2.86071 | overlap 1279544 1279547 TCCGAGGGTACTGGG GAGCGAGCAGGG AAAT CCCTGCTCGCTC GTTGTTCGTGTGGCA TERM 648 1279547 - 1279570 + F 89 -18.2 -2.97707 | overlap 1279545 1279544 CGAGGGTACTGGGGA GCGAGCAGGG AAAT CCCTGCTCGC TCGTTGTTCGTGTGG TERM 649 1280284 - 1280338 + G 77 -15.7 -2.53015 | gap 2 GCGCACGCACCCGAC GCCGGTGCGGCTGAGCGCCTTCTCGAC GAG GTCGAGCGCGCGCTCCGC-GC-TCGGC TCGGTTCAGCAGTGT trd_1288 1279606 - 1280826 + | CinA-like protein TERM 650 1281445 - 1281429 - T 87 -4.4 -5.1675 | gap 1, overlap 1281432 1281433 TCAGCGACGAAAAAA CCAG-CG ACCA CGTCTGG TGCGTCAGGTTCCTC trd_1289 1282217 - 1281720 - | putative conserved hypothetical protein TIGR00043 trd_1290 1284379 - 1282214 - | 7TM-HD extracellular domain protein trd_1291 1284998 - 1284420 - | GatB/Yqey domain superfamily TERM 651 1285027 - 1284998 - Gg 70 -14.3 -2.64274 | gap 1, overlap 1284995 1284994 ACTGCGTCAAATGCA CCGG-ATCGGCACG ACT CGAGCCGATGCCGG CGTCCTACTCGGCAC trd_1292 1284993 - 1285109 + | hypothetical protein TERM 652 1285195 - 1285225 + Tr 81 -16.3 -2.71011 | gap 1, opp_overlap 1285215, overlap 1285183 GTATGCGCCACGGAG C-AGTGCCCCGTTC GAAC GAACGGGGCACTCG TCATTCGAGGACCGT trd_1294 1285783 - 1285226 - | putative lipoprotein trd_1295 1286653 - 1285796 - | hypothetical protein trd_1296 1287926 - 1286628 - | putative lipoprotein trd_1297 1289239 - 1287923 - | hypothetical protein trd_1298 1290159 - 1289236 - | hypothetical protein TERM 653 1289348 - 1289319 - G 83 -17.9 -2.62396 | CACGGTGCCAGACCA GGATCGCTCCGGC CACC GCCGGATCGATCC CGAGCCAGGCGGCGA trd_1299 1291328 - 1290156 - | glycosyltransferase TERM 654 1290265 - 1290211 - G 84 -13.5 -3.74626 | gap 1, overlap 1290212 1290214 AGCAAAGGACGCAAA CGACTCGCCCGAGCTCGATCGGAGGC GACC GCCTCGAACCGTGCTCGAGCG-GCCT GGGCCAGCACCGTGC TERM 655 1290264 - 1290212 - G 84 -17 -2.84053 | gap 1, overlap 1290211 1290214 GCAAAGGACGCAAAC GACTCGCCCGAGCTCGATCGGAGGC GACC GCCTCGAACCGTGCTCGAGCG-GCC TGGGCCAGCACCGTG TERM 656 1290262 - 1290214 - G 81 -16 -2.96232 | gap 1, overlap 1290212 1290211 AAAGGACGCAAACGA CTCGCCCGAGCTCGATCGGAGGC GACC GCCTCGAACCGTGCTCGAGCG-G CCTGGGCCAGCACCG TERM 657 1291467 - 1291441 - R 100 -19.5 -4.7878 | GAGGGAGAAAAGAAA TCCGGGCGCAC TGCTC GTGCGCCCGGA TCGGCATCCGATCGA groL 1293138 - 1291492 - | chaperonin GroEL groS 1293474 - 1293169 - | chaperonin, 10 kDa trd_1303 1293685 - 1294857 + | aspartate aminotransferase A trd_1302 1295678 - 1294854 - | hypothetical protein trd_1304 1295863 - 1295675 - | hypothetical protein TERM 658 1295994 - 1296038 + GH 100 -20.9 -3.61715 | AGCGACGACGCTGCG GTCTACCGTTTGGACGAGC ATGACGC GCTCGTCCAGACGGTCGAC TTCTTCCCGCCGGTC selD 1295922 - 1296899 + | selenide, water dikinase ksgA 1296856 - 1297749 + | dimethyladenosine transferase ispE 1297746 - 1298630 + | 4-diphosphocytidyl-2C-methyl-D-erythritol kinase trd_1308 1299110 - 1298643 - | thioesterase family protein trd_1309 1299234 - 1300430 + | molybdopterin biosynthesis protein TERM 659 1300456 - 1300493 + T 79 -11.3 -3.89346 | opp_overlap 1300456 1300459, overlap 1300456 ATCCCGACGGGAAAA CC-AGACGGGGCCGGGC ATGACC GCCCGGCCC-GTCGCGG TTTATGCACTCGAAC TERM 660 1300493 - 1300456 - T 93 -14.2 -4.13945 | opp_overlap 1300456 1300456, overlap 1300459 ATCCCGACGGGAAAA CCA-GACGGGGCCGGGCA TGAC CGCCCGGCC-CGTCGCGG TTTATGCACTCGAAC TERM 661 1300489 - 1300459 - T 85 -16.9 -3.09831 | gap 1, opp_overlap 1300456 1300456, overlap 1300456 CCGACGGGAAAACCA GACGGGGCCGGGCA TGAC CGCCCGGCC-CGTC GCGGTTTATGCACTC trd_1310 1301000 - 1300518 - | Mov34/MPN/PAD-1 family TERM 662 1300862 - 1300851 - G 76 -5.8 -4.56597 | GCGCTCGGCGAAAAA CTCG ACAG CGAG TTCCGCGCGATTGGT trd_1311 1301275 - 1300997 - | molybdopterin converting factor, subunit 1 trd_1312 1302356 - 1301313 - | cysteine synthase B trd_1313 1302445 - 1304259 + | Stk1 trd_1314 1304256 - 1305083 + | hypothetical protein TERM 663 1305400 - 1305378 - f 74 -10.6 -3.76169 | overlap 1305370 CTAACATGAAGAGAA CTTCCGCG ATCACGA CGCGGAAG TCGAGTGCAGGACCA trd_1315 1305776 - 1306939 + | cytochrome C and Quinol oxidase polypeptide I superfamily trd_1316 1308609 - 1306996 - | Amino acid permease superfamily TERM 664 1307300 - 1307286 - G 79 -10 -4.16943 | TCCGATACGGGAAAA CGATCG CGG CGATCG CAGTGAGAATGAAGG TERM 665 1308542 - 1308516 - G 79 -3.7 -4.96848 | gap 1, opp_overlap 1308522, overlap 1308518 1308519 TGTTGTAGACAAAAA TATCGA-GGAGC GAAA GCTCCTTCGTCA GACCTGTCGCCTCGC trd_1317 1310292 - 1308631 - | Amino acid permease superfamily TERM 666 1309404 - 1309389 - G 70 -4.6 -4.33274 | TCCAGACGAGCAAAA GCCCCC AGAC AAGGGC ATAAACGACTGTTCC trd_1318 1310951 - 1310307 - | Putative cyclase superfamily trd_1319 1311928 - 1310948 - | Ser/Thr protein phosphatase family protein TERM 667 1311160 - 1311112 - G 72 -6.6 -4.24204 | gap 2, opp_overlap 1311157 CATGCAGACTCAAAA CCGGTTGGTA-CCGCTCGAT-CGC CTC GCGCACGGCGCGGCTCCCCACCGG AATCATGTTCGGTTG TERM 668 1311881 - 1311904 + g 91 -11 -4.54727 | opp_overlap 1311880, overlap 1311882 ACTCGTATAGTAGAG CGCCAAGCGA CGCG TCGCTTGGCC TTTTCCTTTCCGGAA TERM 669 1311882 - 1311903 + g 84 -14.5 -3.32354 | opp_overlap 1311880, overlap 1311881 CTCGTATAGTAGAGC GCCAAGCGA CGCG TCGCTTGGC CTTTTCCTTTCCGGA trd_1320 1312844 - 1311957 - | hypothetical protein trd_1322 1313159 - 1313683 + | transcriptional regulator, MarR family trd_1321 1314171 - 1313680 - | putative MOSC domain trd_1323 1315652 - 1314168 - | putative gluconokinase folK 1316155 - 1315652 - | 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase folP 1317000 - 1316152 - | dihydropteroate synthase folB 1317394 - 1317023 - | dihydroneopterin aldolase trd_1327 1318696 - 1317395 - | hypothetical protein trd_1328 1318783 - 1318929 + | hypothetical protein trd_1330 1318933 - 1320543 + | hypothetical protein trd_1329 1321520 - 1320540 - | putative site-specific recombinase, phage integrase family ggt 1322012 - 1323712 + | gamma-glutamyltransferase trd_1332 1323803 - 1324648 + | hypothetical membrane protein, conserved, family TERM 670 1324995 - 1325009 + G 78 -4.2 -4.72007 | ATGCTGGTACTCTTC GTCTTG GAG CGGGAC TTTGTTTTCGTCGCC trd_1333 1324650 - 1325084 + | hypothetical protein TERM 671 1325448 - 1325462 + G 78 -12.8 -3.45023 | TCGTCGTAACCCTGG GGCCGG TTG CCGGCC TTGTCCTGATCATCG trd_1334 1325081 - 1325581 + | hypothetical protein trd_1335 1325583 - 1326425 + | putative Domain of unknown function trd_1337 1326516 - 1327238 + | Copper binding proteins, plastocyanin/azurin family trd_1336 1328843 - 1327230 - | cell envelope-related transcriptional attenuator TERM 672 1328713 - 1328659 - G 100 -14.1 -4.50976 | TGCCAGAGCAGAAAA CCGAGCGCGAGCGCGGGCGGG-ACGCC GAG GGCGAGCCCGCGC-CACGGGCGCCCGG CGATCCAATGACCTG trd_1338 1329014 - 1329835 + | putative cytochrome c heme-binding subunit TERM 673 1330169 - 1330112 - T 83 -15 -3.28924 | gap 1, overlap 1330091 1330090 1330157 GACCGTTCCGGACAA CCGGATCGGACGAT-GTCACGCACG GGTCTGGAA CGTGCGAGACGATCGCCGAATCCGG CGCCGAGTGAGGGGG trd_1339 1331463 - 1330354 - | threonine synthase trd_1340 1332843 - 1331617 - | acyl-CoA dehydrogenase TERM 674 1333163 - 1333197 + G 75 -12 -3.54741 | GGCCGATCTCGGTCG GGGAAGCCGTCGTGAC CAC GGCGGGACGGCTCCCC TTTGCAGCAGTCATC trd_1341 1332985 - 1333515 + | Appr-1-p processing enzyme family protein trd_1342 1333609 - 1334670 + | tartrate dehydrogenase TERM 675 1335410 - 1335433 + G 73 -9.5 -3.85698 | GAACTCGCGCCACTG CGGCTCCGC TGGATC GAGGAGCCG TTTCTGCCGGACCAA trd_1343 1334681 - 1335880 + | mandelate racemase/muconate lactonizing enzyme:Mandelate racemase/muconate lactonizing enzyme trd_1344 1335932 - 1336840 + | DedA family trd_1345 1337869 - 1336934 - | putative dehydrogenase TERM 676 1337985 - 1337958 - H 72 -6.8 -4.24285 | CAGACAGGCAAGAAA GGGCCCGCTGCG GTCT CGCAGTGGCTCC GCACCGAGTGCTCAC TERM 677 1338524 - 1338546 + G 91 -9.8 -4.75174 | CCCTGGCCTACACTG CGGCTGTCTC GCT GACGCAGCCG TTTTTCGGTTACCTG TERM 678 1339127 - 1339148 + G 85 -12.3 -4.15044 | gap 1 TCGTGGCCAGTGGAG CCGCCG-GGA CAC TCCTCGGCGG TTTCTTGGCGGACCG trd_1346 1338355 - 1339551 + | putative membrane efflux protein TERM 679 1339547 - 1339589 + T 100 -22.1 -3.06796 | gap 1 CTGTAGGCAGCCGCT C-CTGACTGCCCGAGCCGGG CCAC TCCGGCGCGGGCAGTCAGCG TTGAGTCAGGTAGCG trd_1347 1340513 - 1339608 - | hypothetical protein trd_1348 1341350 - 1340997 - | degradation protein metE 1343667 - 1341376 - | 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase TERM 680 1343238 - 1343184 - G 70 -6.2 -4.30576 | overlap 1343205 TGCCGAGGAGCAAAA GCGAAATCGGGCCCAGCAGAACCGGC TTG GCCGGTCGTCCCAAGAGCGACGTCGC CTCGGCGAACTCGAG trd_1350 1343887 - 1343693 - | hypothetical protein TERM 681 1343851 - 1343822 - G 100 -19.3 -3.59979 | opp_overlap 1343821 1343820 GTTGCGGACGCGAAA CGGGGAGGCACGC TGGT GCGCACCTCCCCG CCTTTCTCGAGCGCC trd_1351 1344359 - 1343874 - | hypothetical protein trd_1352 1345628 - 1344441 - | Uncharacterized ACR (DUF711) superfamily trd_1353 1345739 - 1346548 + | beta-lactamase trd_1354 1346550 - 1347275 + | hypothetical protein trd_1355 1348338 - 1347301 - | putative oxidoreductase trd_1356 1348560 - 1348441 - | hypothetical protein trd_1357 1348847 - 1348557 - | hypothetical protein trd_1358 1350209 - 1349613 - | putative frnE protein trd_1359 1350652 - 1350263 - | DoxX subfamily TERM 682 1350726 - 1350692 - R 71 -10.7 -3.65351 | gap 1, opp_overlap 1350692 1350694 1350694 1350724, overlap 1350697 CGAGCTGCAGCGAAA GC-GAAGCGGGGGC TTCTCGTT GCCCCCGCCCCTGC TGTCTCACACCGCAT TERM 683 1350720 - 1350697 - R 71 -12.4 -3.29324 | opp_overlap 1350694 1350694 1350692, overlap 1350692 TGCAGCGAAAGCGAA GCGGGGGC TTCTCGTT GCCCCCGC CCCTGCTGTCTCACA trd_1360 1351294 - 1350731 - | YceI like family trd_1361 1351527 - 1351411 - | hypothetical protein trd_1362 1351504 - 1351881 + | hypothetical protein trd_1363 1351900 - 1352832 + | periplasmic binding protein TERM 684 1352883 - 1352897 + G 81 -3.4 -5.01546 | overlap 1352884 CTGTTCGCCAGTATC GGCGGG CTG CTCGCG TTTTTCTATCCGTTT TERM 685 1353119 - 1353137 + G 72 -8.9 -4.00038 | GTTCGTCCCGAGCCT GATCGGA GCCAG TCCGATC TTTCTCCTGATCGTG trd_1365 1352847 - 1353641 + | putative integral membrane protein trd_1364 1354879 - 1353638 - | protein C7orf10 TERM 686 1354894 - 1354861 - G 79 -10.9 -3.84185 | opp_overlap 1354861, overlap 1354868 CCCATCCAAAGACAA CGACGAACGCCACCG ACAC CGGTGGCGCACCTCA TACTGTGCCACAAAT TERM 687 1354887 - 1354868 - G 84 -15 -3.33605 | opp_overlap 1354861, overlap 1354861 AAAGACAACGACGAA CGCCACCG ACAC CGGTGGCG CACCTCATACTGTGC trd_1366 1355668 - 1354928 - | transcriptional regulatory protein degU TERM 688 1355252 - 1355269 + gH 72 -8.4 -4.01135 | GGCGACATGAATCGC CCGGAG CAACTC CTCCGG TTTGCTGTTCTTGAC trd_1368 1355561 - 1355740 + | hypothetical protein trd_1367 1357919 - 1355724 - | GAF domain protein TERM 689 1357074 - 1357097 + g 76 -13.8 -3.14463 | opp_overlap 1357058 TTCGCTGCCGGAGCC GGCCCGCCAC CGCT GTGGCCGGCC TTGCTCCAACACATT TERM 690 1357259 - 1357232 - G 77 -11.2 -3.71552 | AGCGGAGGAACAGAA CTGCGCTCGCTC GAAC GCGCCAGCGCAG CGCCTCCACAATCCG trd_1369 1358077 - 1358841 + | hypothetical protein trd_1370 1358849 - 1360345 + | hypothetical protein TERM 691 1360533 - 1360551 + G 75 -3.8 -4.64861 | CATGCACACGCCATT GGATGGCA AGG TCTCATCC TTTATTTTCCGCAGA TERM 692 1361058 - 1361037 - g 77 -5.1 -4.65933 | opp_overlap 1361041, overlap 1361033 CATCCCGAAAACAAA GGAACACCC TTCG AGGTGTTGC TCGGACGCCTCGGGG trd_1371 1360440 - 1361813 + | ErfK/YbiS/YcfS/YnhG family trd_1372 1362015 - 1363418 + | deoxyribodipyrimidine photo-lyase TERM 693 1363830 - 1363820 - g 82 -6.8 -4.63932 | opp_overlap 1363820 GACCTGGCAAGAAAA GACG GCG CGTC TTCTCTGGGATTTCG trd_1374 1363431 - 1364984 + | probable phytoene dehydrogenase trd_1373 1367152 - 1364975 - | penicillin-binding protein 2 trd_1375 1368230 - 1367256 - | ribose-phosphate pyrophosphokinase TERM 694 1367726 - 1367744 + g 75 -3 -4.72986 | opp_overlap 1367726, overlap 1367729 GGTCAGGGGAAACGA CTACCGGA TTC TCCAGTCG TTTTTCCTGGAAGTA rnc 1368993 - 1368235 - | ribonuclease III trd_1377 1369431 - 1368997 - | hypothetical protein trd_1378 1369884 - 1369525 - | Uncharacterized ACR crcB 1370272 - 1369895 - | crcB protein TERM 695 1370332 - 1370303 - R 72 -11.5 -3.4878 | overlap 1370300 CCAGACCACAAGGAA GCCGAGCTTCT CATCGACC AGAAGCCCGGC CTCACGAATTCCCGG trd_1380 1370609 - 1370406 - | hypothetical protein trd_1382 1370924 - 1371703 + | exopolysaccharide biosynthesis protein hemG 1373094 - 1371700 - | protoporphyrinogen oxidase hemH 1374068 - 1373112 - | ferrochelatase hemE 1375220 - 1374090 - | uroporphyrinogen decarboxylase TERM 696 1375523 - 1375546 + G 74 -13.1 -3.28712 | CCCTGGGCGGAGCGT GTGGCGGGC CGCATC GCCCGCCGC TTCTACGACCACCAG TERM 697 1376500 - 1376471 - g 93 -18.7 -3.65201 | GAACAGGTCGAACAA CTGACCAACCTGG CCAG CCAGGTCGGTCAG ATGGGCCGCGCGATC trd_1385 1375352 - 1377199 + | putative methyl-accepting chemotaxis protein TERM 698 1378145 - 1378184 + G 74 -12.9 -3.28712 | gap 1 ACATTGACGCGTTGG GAGAGCGG-CCAGCAGGA GTTCG TCCTGCTCGTCCGCCCTC TTCTCCCGGACGAGA trd_1386 1377281 - 1378225 + | putative lipoprotein trd_1387 1379034 - 1378234 - | 2-oxo-hepta-3-ene-1,7-dioic acid hydratase TERM 699 1378778 - 1378768 - G 70 -2.4 -4.59853 | overlap 1378769 GCAAGCCGGGAAAAA GCGC GAG GCCC AGAGGCTCCCGTAGT trd_1388 1379764 - 1379036 - | 4-oxalocrotonate decarboxylase TERM 700 1379682 - 1379727 + g 77 -16.1 -2.52795 | overlap 1379689 TCGACCCCGAGTTTT TCCGCGAGCGGCGAGAGAGGC TGGC GTCGCTCTCGTGCCTCGCGGA TCGCTTCCAGGAGTT trd_1389 1379996 - 1379781 - | putative tautomerase trd_1390 1380855 - 1380010 - | putative hydrolase, alpha/beta fold family trd_1391 1381379 - 1380885 - | StyB protein TERM 701 1380963 - 1380953 - G 82 -6.8 -4.69053 | overlap 1380954 CACCACCGAAGAAAA CGAG CGG CTCG CGCTCCCAATAGTCC trd_1392 1382463 - 1381393 - | 4-hydroxy-2-oxovalerate aldolase trd_1393 1383554 - 1382460 - | acetaldehyde dehydrogenase TERM 702 1382632 - 1382655 + gr 75 -14.6 -2.71364 | gap 1, overlap 1382654 TCGCCCCACGGTGTG CGCCGCCGGTC GAA GACCGGC-GCG TCCTTGAGGCGATAC trd_1394 1384144 - 1383323 - | putative transcriptional regulator TERM 703 1384415 - 1384439 + G 76 -5.6 -4.58395 | overlap 1384418 1384418 CGAGGAGTACTTGGA GAGCCTGCGG GACGG CCGCAAGGTC TTTTTCCGCGGTGAA trd_1395 1384359 - 1385894 + | 4-hydroxyphenylacetate 3-monooxygenase, oxygenase component trd_1396 1385929 - 1386909 + | catechol 2,3-dioxygenase trd_1397 1386940 - 1388376 + | putative ABC transporter substrate binding protein TERM 704 1388377 - 1388426 + F 74 -10 -3.76224 | gap 1, overlap 1388380 1388382 GACCTCTCGTTCTAG TCCCTGGGTGCGGGTGACGCTCG CCCAT CGAGCGTCACCCGCAGT-GCGTA TTTGGTACCTGAAGC TERM 705 1388380 - 1388424 + F 91 -16.4 -3.46647 | overlap 1388377 1388382 CTCTCGTTCTAGTCC CTGGGTGCGGGTGACGCTCG CCCAT CGAGCGTCACCCGCAGTGCG TATTTGGTACCTGAA TERM 706 1388382 - 1388423 + F 84 -17.4 -2.67667 | gap 1, overlap 1388380 1388377 CTCGTTCTAGTCCCT G-GGTGCGGGTGACGCTCG CCCAT CGAGCGTCACCCGCAGTGC GTATTTGGTACCTGA trd_1398 1388526 - 1389389 + | ABC-transporter trd_1399 1389402 - 1390454 + | branched-chain amino acid ABC transporter, permease protein trd_1400 1390457 - 1391233 + | putative branched amino acid related transport system, bifunctional protein TERM 707 1391544 - 1391504 - g 76 -9.5 -4.18494 | overlap 1391505 GACGGTCACGGAAAA TCTCCTGATCGGTGCGCGA CCA CCGCGCCCCGACCAGCGGG TCCGCTGGACCGTCG TERM 708 1391543 - 1391505 - g 72 -13 -3.10775 | overlap 1391504 ACGGTCACGGAAAAT CTCCTGATCGGTGCGCGA CCA CCGCGCCCCGACCAGCGG GTCCGCTGGACCGTC trd_1401 1391217 - 1391933 + | branched-chain amino acid ABC transporter, ATP-binding protein trd_1402 1392113 - 1393051 + | Amidohydrolase family trd_1403 1393330 - 1394667 + | putative branched-chain amino acid binding protein trd_1404 1395029 - 1395907 + | ABC transporter, permease protein trd_1405 1395904 - 1397676 + | ABC transporter, ATP-binding protein trd_1406 1397669 - 1398388 + | high-affinity branched-chain amino acid transport ATP-binding proteinlivF trd_1407 1398668 - 1400011 + | Receptor family ligand binding region TERM 709 1400025 - 1400061 + T 82 -15.8 -3.14564 | opp_overlap 1400027 GAGATGCACCACACA CACGAGCGGGGAGCGG CACGA CTGCTCCCCGCTCGCC TTCGTCGGGCACTGC TERM 710 1400059 - 1400027 - T 100 -21.3 -3.02947 | opp_overlap 1400025 GATGCACCACACACA CGAGCGGGGAGCGGC ACG ACTGCTCCCCGCTCG CCTTCGTCGGGCACT trd_1408 1401072 - 1400086 - | ribonucleoside-diphosphate reductase, beta subunit trd_1409 1403404 - 1401092 - | ribonucleoside-diphosphate reductase, alpha subunit TERM 711 1402370 - 1402387 + g 70 -11.3 -3.35996 | GGGGAGCATCCCCGC CTCTGCC TGTC GGCAGAG TTCTCGGTAACGCTC trd_1410 1403980 - 1403825 - | hypothetical protein trd_1411 1404276 - 1405583 + | glycosyltransferase, MGT family trd_1412 1405602 - 1406753 + | hypothetical protein trd_1413 1406750 - 1408519 + | hypothetical protein trd_1414 1411099 - 1408571 - | cation-transporting ATPase pacS trd_1415 1411429 - 1411118 - | Uncharacterized BCR TERM 712 1411525 - 1411505 - H 79 -4 -4.93365 | overlap 1411498 GCCGACAACGAAAAA CTCGAG GTGGACGCT CTCGAG CGATATCCGACTGGC trd_1416 1411511 - 1411642 + | hypothetical protein TERM 713 1411736 - 1411681 - T 80 -14.8 -3.08813 | gap 2, opp_overlap 1411684 1411685 GCTCACGGCAAGAGA CGCAGCCCGCCGTTCGCGAACTCGGC CCGCGT GCCGAGTTCG-GCAC-ACAGGCGGCG CATTCGTTCGCACTG trd_1417 1412642 - 1411668 - | putative poly-gamma-glutamate biosynthesis enzyme trd_1418 1413989 - 1412658 - | hypothetical protein TERM 714 1412881 - 1412893 + g 71 -4.1 -4.58466 | overlap 1412876 1412874 1412873 CGACGGGCCACAGGA TCGAG TCG CTTGA TTTTGTGATTGTAGG trd_1419 1414166 - 1414017 - | hypothetical protein trd_1420 1414507 - 1415595 + | EAL domain protein trd_1421 1415800 - 1417218 + | glutamate-1-semialdehyde 2,1-aminomutase TERM 715 1417229 - 1417282 + T 100 -23.1 -2.57795 | overlap 1417228 AGTGAGTGCGCGTCA CGCATCCTGACGGAGCGGGCGGGGA GAGT TCCCCGCCCGCTCCGACGTGATCGG TGGCTTGATCGTCCA trd_1422 1417551 - 1417300 - | hypothetical protein TERM 716 1417675 - 1417655 - R 100 -16.1 -5.27335 | GGGCGGAAACAAAAA GCGGGGCGC AGG ACGCCCCGC CCCGAGCGATCCCTC trd_1423 1417905 - 1417696 - | hypothetical protein trd_1424 1418340 - 1418020 - | hypothetical protein rpmA 1418636 - 1418337 - | ribosomal protein L27 rplU 1418984 - 1418661 - | ribosomal protein L21 trd_1427 1420951 - 1419425 - | hypothetical protein TERM 717 1419727 - 1419704 - G 80 -8.8 -4.36931 | gap 1 GAAGGGATAGTAAAA GCGA-CGCGGG TCA CCGGCGATCGC GCGCCGGAAGGCCGG trd_1428 1421514 - 1420948 - | hypothetical protein TERM 718 1422266 - 1422283 + GH 75 -7.7 -4.28018 | gap 1, opp_overlap 1422260 CCGAGATCATGGCGG CCGC-TGC GCC GCACGCGG TTTTCATGCACTGTT argF 1421482 - 1422447 + | ornithine carbamoyltransferase trd_1430 1422514 - 1422861 + | hypothetical protein trd_1433 1423729 - 1424955 + | putative transporter TERM 719 1424991 - 1425014 + T 77 -13.1 -3.4072 | opp_overlap 1424991 CCACGCACGAGAAAA GCCCGGGCG TCGAGC TGCCCGGGC TTGTCCTGCCGCGTG TERM 720 1425014 - 1424991 - T 100 -12.4 -4.4767 | opp_overlap 1424991 CCACGCACGAGAAAA GCCCGGGC GTCGAGCT GCCCGGGC TTGTCCTGCCGCGTG trd_1434 1425517 - 1425041 - | small heat shock protein trd_1435 1425678 - 1426955 + | rod shape-determining protein RodA TERM 721 1427476 - 1427439 - g 85 -7.7 -4.70659 | gap 1 GTCGACACCGAAAAA CTC-GCCGGCTATCGC GCAGCTG GCGTCAACCGGCTGAG CCTGGGGGTTCAGAC trd_1436 1427070 - 1428284 + | putative oxygen-independent coproporphyrinogen III oxidase trd_1437 1428318 - 1429145 + | sporulation initiation inhibitor protein soj guaB 1429152 - 1430687 + | inosine-5'-monophosphate dehydrogenase TERM 722 1430702 - 1430756 + T 77 -14.9 -2.91383 | gap 1, opp_overlap 1430690 1430691, overlap 1430714 GAACCGGCCGTCCAC GCACGACGCGGAGCGGGGGTCGTCGG TCGA CTGACGACCCCCGCTCGTTGCCC-GC TGTCTCAATCGGCAT TERM 723 1430714 - 1430745 + T 100 -23.8 -2.72049 | opp_overlap 1430691, overlap 1430702 CACGCACGACGCGGA GCGGGGGTCGTCGG TCGA CTGACGACCCCCGC TCGTTGCCCGCTGTC trd_1439 1432548 - 1430761 - | hypothetical protein trd_1440 1432731 - 1432916 + | hypothetical protein trd_1441 1432980 - 1433171 + | hypothetical protein TERM 724 1433819 - 1433845 + G 70 -5.6 -4.28254 | overlap 1433821 1433829 GAGGCTGCTCGCAAG GCCGGACGCGCC GAG GACGCGATCCGC TTTTCGGTCTTCACC trd_1442 1433168 - 1434046 + | Luciferase-like monooxygenase superfamily TERM 725 1434595 - 1434623 + G 74 -10.9 -3.68024 | opp_overlap 1434592 TTTCTCGAGGAATGG CGAGACCGGCAGT TCG ACCGCTGGACTCG TTATCTCTTCGAGGA trd_1443 1434079 - 1434681 + | hypothetical protein trd_1444 1434706 - 1435206 + | hypothetical protein trd_1446 1435211 - 1435474 + | hypothetical protein trd_1445 1436129 - 1435455 - | Putative cyclase superfamily trd_1447 1436109 - 1436366 + | hypothetical protein trd_1448 1436363 - 1437619 + | putative integral membrane protein TERM 726 1437732 - 1437709 - g 93 -17.4 -3.33696 | overlap 1437670 1437672 TTCGGCCCGAACGAA CCGGCACCGC CCCA GCGGCGCCGG GCCATGGTGCAATTT trd_1449 1437616 - 1438074 + | cation transport ATPases TERM 727 1439321 - 1439337 + G 72 -3.6 -4.65895 | TCACGCTCAAGGCGC GGGGAC ACGCG GTCGCC TTTTTGGGTGACGGC trd_1451 1438162 - 1440138 + | magnesium transporting ATPase, P-type 1 trd_1450 1441520 - 1440105 - | putative FAD dependent oxidoreductase TERM 728 1440965 - 1440987 + gF 74 -10.5 -3.69323 | overlap 1440959 CACCCAGCGCCTGGT GCAGCGCCA CGTTC TGGCGCAGC TTTGCCTCGTCATCC TERM 729 1441818 - 1441784 - gH 100 -15.7 -5.7946 | gap 1 TTTCGAAGAAAAAAA CGCGCGGAGCAC-CGG GGGA CGGAGCGCTCCGCGCG CCAAGGGAAGGGAAG trd_1452 1441473 - 1441910 + | hypothetical protein dnaJ 1442361 - 1443497 + | chaperone protein DnaJ TERM 730 1443616 - 1443584 - T 100 -21.3 -3.20435 | overlap 1443586 TCAAGCATGCACGAA GAGAGAGCGGCGGGA TCT TCCCGCCGCTCCCGC GCCAGGTCAGCAGAA TERM 731 1443614 - 1443586 - T 100 -22.5 -3.16264 | overlap 1443584 AAGCATGCACGAAGA GAGAGCGGCGGGA TCT TCCCGCCGCTCCC GCGCCAGGTCAGCAG TERM 732 1443660 - 1443632 - T 93 -18.2 -3.41602 | opp_overlap 1443632 GCCAGGTCAGCAGAA CGCCCTGCCTCG GCGAT CGAGACAGGGCG TTCCGTTCACGAGCC TERM 733 1443632 - 1443660 + T 85 -16.7 -3.17075 | opp_overlap 1443632 GCCAGGTCAGCAGAA CGCCCTGCCTCGG CGA TCGAGACAGGGCG TTCCGTTCACGAGCC trd_1454 1443828 - 1443667 - | hypothetical protein TERM 734 1443748 - 1443706 - G 70 -11.2 -3.31263 | overlap 1443707 AGCTGACTGGTAGAA GCTCGCCAAGGCACCGCCGA GGA TCGTCAATGCCCCGACGAGG GCGATCGCCACGAAC TERM 735 1443747 - 1443707 - G 74 -14.7 -2.58544 | overlap 1443706 GCTGACTGGTAGAAG CTCGCCAAGGCACCGCCGA GGA TCGTCAATGCCCCGACGAG GGCGATCGCCACGAA trd_1455 1444088 - 1443873 - | hypothetical protein trd_1456 1445426 - 1444362 - | hypothetical protein trd_1457 1445625 - 1445485 - | hypothetical protein TERM 736 1445722 - 1445684 - R 100 -18.9 -4.25104 | opp_overlap 1445676 1445684 GCTCGGGCAGGAAAA GCGCTCGCAGCGCTGAC TTCCC GCCAATGCTGCGAGCGC TCCACCACTTCGGTG trd_1458 1447028 - 1445751 - | probable 4-aminobutyrate aminotransferase trd_1459 1448209 - 1447073 - | putative carboxypeptidase G2 trd_1460 1448786 - 1448190 - | Protein of unknown function superfamily dapB 1449833 - 1448829 - | Dihydrodipicolinate reductase, N-terminus domain protein trd_1462 1450216 - 1449863 - | hypothetical protein trd_1463 1450562 - 1451572 + | putative hydrolase trd_1464 1451577 - 1452236 + | hydrolase, CbbY/CbbZ/GpH/YieH family trd_1465 1453191 - 1452421 - | hypothetical protein TERM 737 1453072 - 1453040 - G 70 -4.9 -4.3739 | gap 2, opp_overlap 1453041 1453052, overlap 1453041 1453042 CACGCGGTCAGAAAA GTGAACGCCCCGAGC CCCAT GCT-GGGGCCTTC-C ATTATCGACCCAGTT TERM 738 1453175 - 1453215 + g 77 -9 -4.2704 | gap 1 CGTAGGAAGTCCAGT GGGATTCCCGTG-AGCACA GAAC TGTGCTGCCCGGGAGCCTC TTTCTTACTCATGGG trd_1466 1453962 - 1453318 - | hypothetical protein trd_1467 1454441 - 1454208 - | hypothetical protein trd_1468 1456197 - 1454761 - | aldehyde dehydrogenase (nadp) family protein TERM 739 1455086 - 1455051 - G 70 -6 -4.21933 | gap 1 CGAACGGGAAAAGAA CGACCAGC-GGCGCGAA CGC CTCGCGGCTGCAGACCG GGTGCCACTTCGGCG trd_1469 1457727 - 1456312 - | aspartate ammonia-lyase trd_1470 1458409 - 1457747 - | nadh-quinone oxidoreductase chain i trd_1471 1460663 - 1458228 - | formate dehydrogenase, alpha subunit homolog TERM 740 1459985 - 1459965 - GRH 72 -9 -4.16943 | GCCCACATCGCAAAA GCCACAGA TCGTC TCCGTGGC GTCCAACTCCCAGGG trd_1472 1460859 - 1460734 - | hypothetical protein trd_1473 1460829 - 1461017 + | hypothetical protein trd_1474 1460969 - 1462420 + | glutaminyl-tRNA synthase, glutamine-hydrolyzing, subunit B trd_1475 1462417 - 1462530 + | hypothetical protein TERM 741 1463059 - 1463092 + G 74 -15.3 -2.62184 | gap 1, overlap 1463078 TGCCCGCAGTCGTGA CCGG-CAAGCCGCCGA TCC TCGGTGGCTCGGCCGG TCGTCTGGAGGCAAC TERM 742 1463078 - 1463121 + G 85 -16.6 -3.04144 | overlap 1463059 CAAGCCGCCGATCCT CGGTGGCTCGGCCGGTCGTC TGGA GGCAACCGGCCGGGGCGTCG TCTTCGCGATCGAAG trd_1476 1462524 - 1463789 + | glutamate dehydrogenase TERM 743 1463825 - 1463857 + T 100 -22.1 -2.81133 | GCGCCTCGGCGTGCA CCCCTCCGCTCGACA GGA TGTGGAGCGGAGGGG TGTCGTGCCTCGCTC trd_1477 1465208 - 1464138 - | hypothetical protein TERM 744 1465339 - 1465313 - R 72 -6.5 -4.22214 | overlap 1465314 1465317 AGGGAGCGAAAACAA GGCATGCCTCG GTGGA CGAGGCACACT CGTCGAGAACCTGTC trd_1478 1466043 - 1465375 - | potassium channel related protein trd_1479 1466497 - 1466078 - | Trk system potassium uptake protein trkA trd_1480 1466931 - 1466494 - | universal stress protein family trd_1481 1467715 - 1466984 - | phosphatase family protein TERM 745 1467150 - 1467119 - GH 79 -10.8 -4.13654 | CTCCCAAAGCAGAAA GGCAGCCCGAGGAT CCCC ATCCCTCGGCTGCC CCACTGATCCCGGGT trd_1482 1467690 - 1467827 + | hypothetical protein TERM 746 1467824 - 1467839 + FH 72 -9 -4.18018 | CACCGCTCGACGAGT GTAGCG AGGG CGCTAC TTTTCCATCACACGC trd_1483 1467927 - 1468679 + | hypothetical protein TERM 747 1468702 - 1468757 + F 77 -14.6 -2.7898 | gap 1, opp_overlap 1468707, overlap 1468750 GGAGTTCGCCCTTCT GGA-AACGTGGAGCGAGCCGGCGATCG CGG TGAGCGCCGGCCCGCTCCACGGGGTAC TCGTTCGATGTTCCC TERM 748 1468751 - 1468707 - f 100 -29.4 -3.53012 | opp_overlap 1468702 1468750 TCGCCCTTCTGGAAA CGTGGAGCGAGCCGGCGATC GCGGT GAGCGCCGGCCCGCTCCACG GGGTACTCGTTCGAT trd_1484 1468851 - 1469276 + | transcription regulator, ArsR family trd_1485 1469280 - 1469489 + | hypothetical protein trd_1486 1469482 - 1470216 + | putative integral membrane transporter TERM 749 1470374 - 1470408 + G 75 -12 -3.53012 | GCTCAGCTGCAGCCA CCGGTCCGGGTCGCGA TCG TGGAGACCCCGGCCGG TTTCCAACCGAACGC trd_1488 1470248 - 1471090 + | hypothetical protein trd_1487 1472356 - 1471073 - | transporter, major facilitator family trd_1490 1472413 - 1472739 + | Cupin domain protein trd_1489 1473951 - 1472728 - | putative efflux protein trd_1491 1473908 - 1474237 + | hypothetical protein trd_1492 1474263 - 1475819 + | dihydrolipoamide S-acetyltransferase trd_1493 1475834 - 1476826 + | TPP-dependent acetoin dehydrogenase alpha-subunit trd_1494 1476844 - 1477863 + | 2-oxoisovalerate dehydrogenase beta subunit trd_1495 1477860 - 1478873 + | acetoin catabolism protein X trd_1496 1479710 - 1479225 - | mgtC family protein TERM 750 1479554 - 1479540 - G 79 -10 -4.13767 | CTCCGGACGGGAAAA CTGCTC CAT GAGCAG CATCGAGCAGACCAT TERM 751 1479946 - 1479920 - R 86 -15.1 -3.4439 | opp_overlap 1479916, overlap 1479921 CACATCAACGCACAA CGCGGGCAGCG CTGCT CGCTGCCCGCT CGCTGTCTCCAGTGC TERM 752 1479945 - 1479921 - R 87 -18.6 -2.66152 | opp_overlap 1479916, overlap 1479920 ACATCAACGCACAAC GCGGGCAGCG CTGCT CGCTGCCCGC TCGCTGTCTCCAGTG trd_1497 1480345 - 1479971 - | hypothetical protein trd_1498 1480690 - 1480349 - | putative membrane protein mmpL7 trd_1499 1481332 - 1480703 - | putative lipoprotein TERM 753 1481164 - 1481108 - G 72 -6.5 -4.22883 | overlap 1481105 1481112 GAGCACCCAAAAGAA CGGACCGATCGTCG-CCTGCTGCTCGC CGCTT GCGACCTTCAGGACGA-GATCGGGCGG CTTGAGAACCACCGG trd_1500 1481707 - 1481582 - | hypothetical protein TERM 754 1481896 - 1481911 + H 70 -4.6 -4.4009 | overlap 1481898 1481901 1481903 CGAGACACTCGATCC GATCGG ACCG CCGAGC TTTTGTCACATCAGC TERM 755 1481901 - 1481939 + H 77 -8.2 -4.26903 | gap 1, overlap 1481898 1481896 1481903 CACTCGATCCGATCG GACCGCCGAGCTT-TTG TCACAT CAGCGAGCTCGGCGGTG TTTTACTGGAATGAC TERM 756 1481903 - 1481937 + H 74 -10.8 -3.73756 | gap 1, overlap 1481898 1481896 1481901 CTCGATCCGATCGGA CCGCCGAGCTT-TTG TCACAT CAGCGAGCTCGGCGG TGTTTTACTGGAATG trd_1501 1481966 - 1482544 + | RNA polymerase ECF-type sigma factor TERM 757 1482800 - 1482784 - g 93 -13.7 -4.09685 | overlap 1482788 CGCTATTTCCGAAAA GCGAGCG CTG CGCTCGC AGCAACTCTCGCCCT trd_1502 1482541 - 1483650 + | hypothetical protein trd_1503 1483721 - 1484677 + | copper transport ATP-binding protein nosF trd_1504 1484674 - 1485531 + | putative ABC-type transport system involved in multi-copper enzyme maturation, permease component trd_1506 1485609 - 1486244 + | putative metallo-beta-lactamase superfamily trd_1505 1487506 - 1486241 - | processing protease trd_1507 1488020 - 1487520 - | competence/damage-inducible protein CinA C-terminal domain trd_1508 1489322 - 1488057 - | putative membrane transport protein trd_1509 1490277 - 1489429 - | hypothetical protein trd_1510 1491241 - 1490279 - | hypothetical protein trd_1511 1491971 - 1491306 - | putative 3-methyladenine DNA glycosylase valS 1494845 - 1492167 - | valyl-tRNA synthetase trd_1513 1494828 - 1495196 + | hypothetical protein trd_1514 1495649 - 1495353 - | hypothetical protein trd_1515 1496850 - 1495663 - | acetylornithine aminotransferase argB 1497692 - 1496847 - | acetylglutamate kinase trd_1517 1498339 - 1497689 - | hypothetical protein TERM 758 1497778 - 1497755 - G 72 -3 -4.6951 | overlap 1497757 1497774 ATGACCGAAAAGAAA TCGCCGCTCC TGGA GGAGACGCAA CCCGGCTGCTTCGCC argC 1499408 - 1498350 - | N-acetyl-gamma-glutamyl-phosphate reductase lysX 1500327 - 1499443 - | Lysine biosynthesis enzyme LysX TERM 759 1499711 - 1499697 - G 73 -5.6 -4.33417 | overlap 1499698 GGCAGGGATAAGAAA CCGCCC CGC GAGCGA CATTGGTCACCCAGT trd_1520 1501418 - 1500324 - | N-acetyl-ornithine/N-acetyl-lysine deacetylase subfamily trd_1521 1502248 - 1501415 - | putative lysine biosynthesis enzyme LysX lysW 1502406 - 1502251 - | lysine biosynthesis protein LysW TERM 760 1502483 - 1502446 - H 95 -17 -4.12188 | GTACGACTCGCAAAA CGAATCGGCGGTGAGC TTGTGG GCCCACCGCCGCTCCG GCTCGACGCTCGCGT trd_1523 1502939 - 1504612 + | putative ABC transporter periplasmic binding protein A TERM 761 1504716 - 1504738 + G 70 -4.9 -4.34263 | gap 1, overlap 1504717 1504727 TCGCCATCCCGGTCA TGTTGCTCGT GGCA ACG-GCAACG TTTCTCTTGTTGCAC trd_1524 1504670 - 1505617 + | dipeptide ABC transporter permease trd_1525 1505632 - 1506531 + | oligopeptide ABC transporter permease protein trd_1526 1506663 - 1507325 + | hypothetical protein trd_1527 1507458 - 1507330 - | hypothetical protein TERM 762 1507431 - 1507410 - G 74 -10.1 -3.70446 | GGAGACCGAACAGAA CGCCGAGCA CCGC TGCTCGTCG GATACTGACCGAGCG cadA 1509575 - 1507476 - | cadmium-translocating P-type ATPase trd_1529 1509921 - 1509550 - | putative ArsR-family regulator metG 1510507 - 1512261 + | methionyl-tRNA synthetase trd_1531 1514769 - 1512523 - | probable soluble lytic murein transglycosylase precursor TERM 763 1513198 - 1513214 + g 74 -5 -4.51799 | opp_overlap 1513196 1513194 GAGGAGCAAGAGAGC CCGCCG GGGCG CAGCGG TTTTCTCGATTTCCT TERM 764 1514343 - 1514305 - G 83 -14.7 -3.18264 | gap 2, opp_overlap 1514297, overlap 1514288 GCGTGCAGCCAGGAA CTCCTCGGCTGCTTGGCCA GGC TGGCCACGC-GCC-AGGAG CGCCTCCCCGGCGAT TERM 765 1514584 - 1514562 - G 72 -9 -4.07687 | ATCCCGCTGCCAAAA GTCGCTCCGC TTG GAGGAGCGCC TCGACCGGGTCGTCT TERM 766 1515005 - 1515016 + G 70 -5.8 -4.30844 | TCTGGTTGCTCGTCA TCGC TGCC GCGA TTTTGCTGGTCGCCT trd_1532 1514905 - 1515174 + | hypothetical protein trd_1533 1515409 - 1515618 + | hypothetical protein trd_1534 1515615 - 1516088 + | hypothetical protein trd_1535 1516165 - 1516956 + | dolichol-P-glucose synthetase trd_1536 1516994 - 1518022 + | BNR/Asp-box repeat domain protein trd_1537 1519315 - 1518062 - | MFS permease trd_1538 1519786 - 1520973 + | hypothetical protein trd_1539 1521042 - 1521392 + | hypothetical protein trd_1540 1522683 - 1521643 - | putative transcriptional regulator TERM 767 1521711 - 1521741 + g 71 -11.9 -3.29511 | gap 1, opp_overlap 1521707, overlap 1521712 GGCGGAGGATACCGC GCGCTTGCGCGAGC ACCT GCTCGCG-AAGCGA TTCTGGGCGGATCAC TERM 768 1521712 - 1521740 + g 77 -15.4 -2.57564 | gap 1, opp_overlap 1521707, overlap 1521711 GCGGAGGATACCGCG CGCTTGCGCGAGC ACCT GCTCGCG-AAGCG ATTCTGGGCGGATCA TERM 769 1523114 - 1523135 + G 88 -2.1 -5.28176 | overlap 1523117 CCTCGTCGAAGCGTT GGCCCGGAC CGAA GTCCGCCTC TTTTTTCTCGGTGCA trd_1541 1522773 - 1523600 + | N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase trd_1542 1523597 - 1524148 + | hypothetical protein TERM 770 1524769 - 1524785 + G 71 -9.3 -3.72893 | opp_overlap 1524762 GTGATCAAGTGCAAC CGCGCCG AGG CGGAGCG TTTCCTCGAACGCTC trd_1544 1524145 - 1525164 + | bifunctional protein hldE trd_1543 1527053 - 1525161 - | ABC transporter ATP-binding protein TERM 771 1527116 - 1527095 - R 100 -13.7 -4.33417 | GCGAGGGAGAAGAAA CCGGCTGGA GCAT CCCAGCCGG CGATCAGCTTCTGAC TERM 772 1527207 - 1527169 - R 78 -13.2 -3.4376 | AGAGACCGACGACAA TCATGATCACGGCCATCA CCA CGATGACCGCGATCGCGA TCCACCCGATCGCTG trd_1545 1527331 - 1527146 - | hypothetical protein trd_1546 1528362 - 1527400 - | Luciferase-like monooxygenase superfamily trd_1547 1528521 - 1529627 + | hdac6 protein trd_1548 1529915 - 1529637 - | hypothetical protein uvrB 1530073 - 1532079 + | excinuclease ABC, B subunit trd_1550 1532750 - 1532172 - | hypothetical protein TERM 773 1532275 - 1532261 - G 71 -7.8 -4.11216 | overlap 1532245 CGCCGATCGCGAAAA TCGCCG CGC CGACGA CGAGCAGGACCGCAG trd_1551 1533854 - 1533081 - | putative two-component system response regulator trd_1552 1535139 - 1533718 - | putative two component system histidine kinase TERM 774 1535096 - 1535062 - GH 71 -10.7 -3.61715 | gap 2 GAGTGCGGCCAAGAA GGC-GA-GCGGCAGGAC GAT GCCCAGCCGCTTCAGCC TGGCCATCGCCCGAT trd_1553 1535420 - 1535803 + | HesB/YadR/YfhF TERM 775 1535826 - 1535859 + F 72 -6.6 -4.20516 | overlap 1535827 1535829 1535831 AACCATCGAAGAGGC ATGGGCCGGCAGCC ACGTTC GGCTGCCGGTATAC TTTCTTCGGTCGCGC TERM 776 1535831 - 1535854 + F 80 -15.3 -3.11162 | overlap 1535829 1535827 1535826 TCGAAGAGGCATGGG CCGGCAGCC ACGTTC GGCTGCCGG TATACTTTCTTCGGT trd_1556 1536266 - 1536460 + | hypothetical protein TERM 777 1536482 - 1536519 + T 95 -16.9 -4.19817 | opp_overlap 1536485, overlap 1536483 GTCGCGCGTGTGGAT GAAGAGCGACGCCCCGG CAAG CCGGGGCGTCGCTCGAG TTTTCCGTCAATAGA TERM 778 1536483 - 1536518 + T 100 -20.4 -3.11569 | opp_overlap 1536485, overlap 1536482 TCGCGCGTGTGGATG AAGAGCGACGCCCCGG CAAG CCGGGGCGTCGCTCGA GTTTTCCGTCAATAG TERM 779 1536516 - 1536485 - T 100 -27.4 -3.14132 | opp_overlap 1536483 1536482 GCGCGTGTGGATGAA GAGCGACGCCCCGG CAAG CCGGGGCGTCGCTC GAGTTTTCCGTCAAT glnA 1537996 - 1536527 - | glutamine synthetase, type I TERM 780 1537211 - 1537247 + g 73 -12.4 -3.35438 | overlap 1537212 CAGATCATGCTGTTG AGCGATCGCTTTCAAG GTGTA CTTGAAGGTGATCGCG TTGTCGGCTGTCGTC TERM 781 1537212 - 1537246 + g 77 -15.9 -2.60941 | overlap 1537211 AGATCATGCTGTTGA GCGATCGCTTTCAAG GTGTA CTTGAAGGTGATCGC GTTGTCGGCTGTCGT glnA 1539510 - 1538062 - | glutamine synthetase, type I TERM 782 1539127 - 1539100 - G 90 -5.6 -5.18355 | gap 1, overlap 1539102 GTCAAAAATGAAAAA CTCGA-TTTCCGG TCC CCAGAAACTCGTG TCGGCGATCCCCAGA TERM 783 1540978 - 1540932 - g 71 -12.3 -3.28791 | gap 1 ACTCGCTTTTCACAA CGTC-CTGCTCGGAATCGCCAG TCGC CTGGTGACAGCGAGCAGCGACG AGTTCGAGAACGTCG TERM 784 1542240 - 1542271 + G 72 -8.7 -4.1899 | gap 1, opp_overlap 1542228 AATCGCCTTCCAGGT CGG-CAAGCGCGCC GGTCA GGAGCGTTTGTCCG TTTTCGATCCGGTGC trd_1559 1540072 - 1543098 + | c-di-GMP phosphodiesterase A trd_1560 1544698 - 1543124 - | methylmalonyl Coenzyme A mutase TERM 785 1543372 - 1543349 - G 76 -13.9 -3.09516 | opp_overlap 1543345 CGCTGCATCATCCAA CCGGTGCAC CGGTAC GTGCACCGG TATCGCGTCTTGATA trd_1561 1544984 - 1544802 - | hypothetical protein lon 1545230 - 1547548 + | ATP-dependent protease La trd_1563 1547659 - 1549437 + | peptidase, M28 family trd_1565 1549505 - 1550623 + | Rod shape-determining protein mreB trd_1564 1551093 - 1550620 - | lipoyltransferase trd_1566 1551611 - 1551180 - | hypothetical protein trd_1567 1552789 - 1551623 - | cysteine desulfurase/cysteine sulfinate desulfinase trd_1568 1553826 - 1552795 - | putative molybdopterin biosynthesis MoeB protein TERM 786 1553883 - 1553932 + H 84 -16.5 -2.79796 | gap 2, opp_overlap 1553854 TCCGGCTCGTCCCAA GCGGGCT-GGCCACTGCTCC-CG TGCGTC CGAGGAGCAGCGGCCCGGCTCGC TCTCATGGGGTGCCG TERM 787 1554005 - 1554023 + G 89 -14.6 -3.77196 | GCCTGACTGTCGTCG CTCGCGAC GGC GTCGCGAG TTTCCTCGGTCCTGG trd_1570 1553977 - 1554459 + | hypothetical protein trd_1569 1555487 - 1554456 - | Prephenate dehydrogenase TERM 788 1554987 - 1554964 - G 75 -6.6 -4.42386 | overlap 1554965 1554966 TCGGCATCGAGAAAA CGCGGCTC GGCGCCGA GCGCCGCG ACCAGCCCCAGCACC trd_1571 1556150 - 1555659 - | hypothetical protein TERM 789 1555912 - 1555861 - G 76 -13.6 -3.1372 | gap 1, overlap 1555859 GATCCCTGAGCAACA CGGT-GCGTCGCCTGCCACGCCGGC GTG GGCGTCACCGCAGGTGACGCTACCG GAGTCGGACTGGGAC trd_1572 1556280 - 1557779 + | aldh TERM 790 1557804 - 1557838 + T 89 -15 -3.76224 | gap 1, opp_overlap 1557802, overlap 1557806 CCGAGCGGAACGATC GC-GCGAGCCGGCTC CCCACC GAGCCGGCGCGCTGC TTTCCTCACTGGACA TERM 791 1557806 - 1557835 + T 85 -16.4 -2.97667 | opp_overlap 1557802, overlap 1557804 GAGCGGAACGATCGC GCGAGCCGGCTC CCCACC GAGCCGGCGCGC TGCTTTCCTCACTGG trd_1573 1557984 - 1557844 - | hypothetical protein trd_1574 1558944 - 1558066 - | putative monooxygenase trd_1575 1559232 - 1559023 - | putative lipoprotein TERM 792 1559877 - 1559900 + H 80 -15.2 -3.05384 | GGGGCTTGCGGACTG AGCCCGGGGC TTCA GCCCCGGGCG TTCGCTGCCGACCGC TERM 793 1560107 - 1560072 - H 77 -13.2 -3.32844 | gap 1, overlap 1560073 GTCGCCACCGCATAA CCCCGTAGGGGCGAGGC GCT GCCTCGCCCGC-CGGGC GGGACGCCCGGCAAT TERM 794 1560106 - 1560073 - H 81 -16.7 -2.59564 | gap 1, overlap 1560072 TCGCCACCGCATAAC CCCGTAGGGGCGAGGC GCT GCCTCGCCCGC-CGGG CGGGACGCCCGGCAA TERM 795 1561119 - 1561094 - g 86 -14.7 -3.54129 | opp_overlap 1561096 1561115 GACAGCCTCTTGAAA GAGCGCGCCGC CGGT GCGACGCACTC GTTCGAGCAACTCGC trd_1576 1560593 - 1561336 + | putative lipoprotein TERM 796 1561409 - 1561369 - f 89 -18.4 -2.82516 | gap 1 CTCGCTACCAGGAGA CCGCTGCCCCTGCCGCG CCGGTCAT CGCGACAGGG-CAGCGG CCCCCTATGGACACG trd_1577 1561547 - 1562248 + | putative lipoprotein trd_1578 1562286 - 1563470 + | hypothetical protein trd_1579 1563454 - 1564461 + | uroporphyrinogen decarboxylase trd_1580 1564470 - 1565513 + | hypothetical protein cad 1567024 - 1565537 - | lysine decarboxylase TERM 797 1566122 - 1566178 + g 71 -13.6 -2.70932 | overlap 1566124 GAGCCCGGGGATCGC GGCCAGCTCCCGCCGGGCATGCTCGG CCAGC TCGAGTGTGCGCGCCAGGAGCTGCTC TCCTTCCAGCGCCAG TERM 798 1567365 - 1567343 - g 71 -13.4 -3.01791 | ACGCCGCCCCGAATA CGACCGCCTG ATC CAGGCGCTCG AACGCCTGATCGAGG trd_1582 1567173 - 1567955 + | hypothetical protein trd_1583 1569299 - 1568652 - | hypothetical protein trd_1584 1570875 - 1569406 - | hypothetical protein trd_1585 1571168 - 1570872 - | hypothetical protein TERM 799 1571431 - 1571447 + r 77 -15.1 -2.87132 | CGCTGCCTGACCCGT CCGGCCC GCA GGGCCGG TATATCACCGCGCAC trd_1586 1573624 - 1572335 - | phage domain protein trd_1587 1574143 - 1575498 + | thermitase TERM 800 1575755 - 1575728 - T 81 -16.4 -2.52896 | gap 1 CTACCGTCGAACCCA GGCGTG-CCTGGA CCG TCCAGGTCACGCC TGCGTGACCCGTCCG TERM 801 1576449 - 1576420 - T 100 -21.5 -3.33696 | overlap 1576421 CTCCTGCTGAACGAA CGAGGGCGGGGTC GTGT GACCCCGCCCTCA CCCAGTCACCCAGAC TERM 802 1576448 - 1576421 - T 100 -22.8 -2.60075 | overlap 1576420 TCCTGCTGAACGAAC GAGGGCGGGGTC GTGT GACCCCGCCCTC ACCCAGTCACCCAGA trd_1588 1578695 - 1576479 - | hypothetical protein trd_1589 1579462 - 1579259 - | hypothetical protein trd_1590 1579553 - 1580698 + | Uncharacterized ACR trd_1591 1581065 - 1580817 - | O-methyltransferase trd_1592 1581303 - 1582241 + | glycosyltransferase TERM 803 1582864 - 1582830 - g 71 -10.7 -3.68351 | gap 2, opp_overlap 1582831 1582852 1582863 GGTGCAGCAGGGAAA GCGGCCGCGCCGGCGGA CGT TCCTC-GGC-CAGCCGC TGCGCGAGTTCTGGC TERM 804 1583607 - 1583634 + G 77 -11.2 -3.78778 | overlap 1583625 CCGGCGCGAAGCGCT CCGCTCGGTCGG CCTG CTGGACGAGCGG TTCTTCCTCTACTCC TERM 805 1583816 - 1583843 + G 74 -5.4 -4.46212 | gap 1, overlap 1583818 ATCGCCGACTGCACG GACCGCTGGCCGC CGA GCTGCT-GCGGGC TTTTCTCCTGGCGAC trd_1593 1582228 - 1584006 + | dTDP-Rha:a-D-GlcNAc-diphosphoryl polyprenol, a-3-L-rhamnosyl transferase trd_1594 1584017 - 1585165 + | glycosyl transferase, group 1 family protein trd_1595 1585244 - 1585636 + | hypothetical protein TERM 806 1586300 - 1586281 - g 80 -15 -3.14132 | CCCGCCGCCGAGGAA CTGGCGGC GCTG GCCGCCAG CCGACCGCTGGTCAT trd_1596 1585657 - 1586958 + | hypothetical protein TERM 807 1587757 - 1587710 - T 89 -13.2 -4.07885 | gap 1, overlap 1587715 1587756 GACGGCGCGGCAAAA CGACACGGCGCGCTCGCCGCCCG GCA CGCTCAGCG-GCGCGCCAAGACG ACGCTGGCCAGGCTC TERM 808 1587752 - 1587715 - T 72 -13.3 -3.09823 | gap 1, overlap 1587710 CGCGGCAAAACGACA CGGCGCGCTCGCCGCCCG GCA CGCTCAGCG-GCGCGCCA AGACGACGCTGGCCA trd_1597 1588101 - 1587739 - | hypothetical membrane spanning protein TERM 809 1588220 - 1588193 - R 100 -25.6 -4.3739 | opp_overlap 1588205 CACTCGCCGAGAAAA CCGCCCCGGGGC CGTG GCCCCGGGGCGG ATGCGCGAGGCGCTG trd_1598 1590706 - 1588238 - | putative hemagglutinin/hemolysin-related protein TERM 810 1590939 - 1590908 - R 95 -16.6 -4.1399 | GGAGGTACAGAGAAA CGGGCGATGCCG GTGGGGGA CGGCACCGCCCG AGCGTGAGGAGGAGT trd_1599 1592306 - 1591041 - | histidine kinase PhoR1 TERM 811 1591223 - 1591200 - G 71 -3.8 -4.58395 | overlap 1591202 GTCACCTTTGAAAAA GCGCTCGA AGACGCGA TCGAGCTC GTCGGCGGGGATCCC TERM 812 1592173 - 1592121 - G 71 -11.9 -3.21218 | gap 1, overlap 1592122 ATCGTCGAGCAGGAA CCGGAACGCGTCCAGTGACCGCGC GTCGAG GAGCGGTCGCTGGA-GCGGGCCGA TCGTCGGATGCTCGC phoP 1593091 - 1592372 - | alkaline phosphatase synthesis transcriptional regulatory protein PhoP trd_1601 1593196 - 1594299 + | probable smf protein TERM 813 1594864 - 1594827 - g 70 -4.7 -4.33928 | gap 1 CAGTTCAAAGAGAAA CCGGATCGTGC-CACCGC TGA GCAGTACGTCCGCTCCGG GGAATACTGCTGGAA trd_1602 1594296 - 1595369 + | mannose-1-phosphate guanylyltransferase (GDP) TERM 814 1595822 - 1595836 + G 71 -7.8 -4.08216 | opp_overlap 1595820 1595821 GGGCTCACGACAAGC CGGTGC GGC GCATCG TTTTCCACGAGATCA topA 1595416 - 1597650 + | DNA topoisomerase I hslV 1597706 - 1598299 + | heat shock protein HslV TERM 815 1598876 - 1598907 + G 76 -13.8 -3.13522 | opp_overlap 1598875 1598876 1598878, overlap 1598874 1598883 GCTGGAGGACGAAAC GATCGAGCTCGATC TGGA GAGCGAGTTCGATC TCTTCGTCACACCGT hslU 1598277 - 1599701 + | heat shock protein HslVU, ATPase subunit HslU trd_1606 1599721 - 1600443 + | dolichyl-phosphate mannose synthase related protein trd_1607 1600451 - 1601428 + | transcriptional repressor TERM 816 1602208 - 1602233 + G 79 -10.4 -4.18018 | opp_overlap 1602207 CGCGGTGGACCGAAG CGGGGCGTTG CGTCTC CAACGGCCCG TTTTACCTGGCGAGC TERM 817 1602443 - 1602429 - g 77 -11.4 -3.69395 | GTGAGCAGCGAAGAA GCGCTC CTG GAGCGC GTGGAGCGGAGCATT trd_1609 1601448 - 1603235 + | putative dipeptide ABC transporter dipeptide-binding protein trd_1608 1603434 - 1603189 - | hypothetical protein TERM 818 1603238 - 1603253 + gF 73 -11.8 -3.35679 | CCGGGGCAGCTGAAG GCGCGC CATC GCGCGC TTCTCGGTCGAGCCG ilvE 1603420 - 1604382 + | branched-chain amino acid aminotransferase trd_1611 1605897 - 1604401 - | glutamate-1-semialdehyde 2,1-aminomutase trd_1612 1605882 - 1606904 + | 1-aminocyclopropane-1-carboxylate deaminase trd_1613 1606901 - 1609339 + | primosomal protein N' def 1609384 - 1609914 + | peptide deformylase trd_1615 1610571 - 1609918 - | guanylate kinase TERM 819 1611798 - 1611759 - g 70 -11.4 -3.38559 | gap 1, overlap 1611763 AGGAGAATGGGAGAA GCGATCCTGGC-CGCACTC GGC GAGCTCGTGCCAGGACAGC GCGAACTCGTCGTCG trd_1616 1610688 - 1612448 + | putative fibronectin-binding protein tatC 1613231 - 1612455 - | Sec-independent protein translocase TatC TERM 820 1613315 - 1613282 - R 93 -19 -3.09671 | gap 1, opp_overlap 1613284 1613286 1613296, overlap 1613284 1613286 ACGCTAAGCGTAACA GACAGGCGCGGGCAC GACGA GT-CCCGCGCCTGTC TCTGCCGCGTCAGCT TERM 821 1613313 - 1613284 - R 82 -15.8 -3.10612 | gap 1, opp_overlap 1613284 1613286 1613296, overlap 1613282 1613286 GCTAAGCGTAACAGA CAGGCGCGGGCAC GACGA GT-CCCGCGCCTG TCTCTGCCGCGTCAG TERM 822 1613284 - 1613313 + r 80 -15.8 -2.87931 | gap 1, opp_overlap 1613284 1613282 1613286, overlap 1613286 1613296 GCTAAGCGTAACAGA CAGGCGCGGGCAC GACGA GT-CCCGCGCCTG TCTCTGCCGCGTCAG acpP 1613581 - 1613336 - | acyl carrier protein nusB 1614627 - 1614121 - | transcription antitermination factor NusB accC 1616058 - 1614706 - | acetyl-CoA carboxylase, biotin carboxylase TERM 823 1614844 - 1614864 + g 77 -13.3 -3.30124 | CGTTTCGCGGAGAGC GCGGTCGAG TCG CTCGATCGC TTGTGCCCGATCGAG TERM 824 1615821 - 1615810 - G 79 -7.2 -4.56597 | GTTCTCGGCCAAAAA CCCG TAAC CGGG GTGGAGGGCATCGCA fabG 1616813 - 1616064 - | 3-oxoacyl-(acyl-carrier-protein) reductase fabD 1617793 - 1616810 - | malonyl CoA-acyl carrier protein transacylase trd_1623 1618760 - 1617753 - | 3-oxoacyl-[acyl-carrier-protein] synthase III protein 1 TERM 825 1618104 - 1618131 + gr 72 -13.4 -3.05384 | opp_overlap 1618100 1618092 AAAGCGGAACACCTC GCGGCCGGCCAT GCGG ATGACCGGTCGC TTGGGTGCGACCGAG trd_1624 1619093 - 1618788 - | hypothetical protein TERM 826 1619060 - 1619046 - G 71 -10 -3.57144 | CGGTGCATGCCGAAA CTCCTC CGC GAGGAG GTCACTGCATGCTGA trd_1625 1619618 - 1619094 - | Uncharacterized ACR trd_1626 1619768 - 1620532 + | 2-dehydro-3-deoxyglucarate aldolase ilvE 1620571 - 1621521 + | branched-chain amino acid aminotransferase trd_1628 1621596 - 1623320 + | protein precursor trd_1629 1623512 - 1624537 + | oligopeptide ABC transporter, ATP-binding protein trd_1630 1624527 - 1625561 + | oligopeptide ABC transporter, ATP-binding protein trd_1631 1625568 - 1626212 + | metal-dependent protease scpA 1626226 - 1626945 + | segregation and condensation protein A scpB 1626932 - 1627498 + | segregation and condensation protein B TERM 827 1628288 - 1628311 + T 80 -15.2 -3.05384 | GGGGCTTGCGGACTG AGCCCGGGGC TTCA GCCCCGGGCG TTCGCTGCCGACCGC trd_1634 1629812 - 1628640 - | cysteine desulfurase TERM 828 1629249 - 1629215 - G 81 -12.8 -3.6682 | GGGCACTGATGGAAA GCAGGTCGACGCCGAG CTC CTCGACATCGAGCGGC AAGGTGCCAGCTGCC TERM 829 1629743 - 1629796 + g 71 -9.5 -3.78409 | gap 1, opp_overlap 1629735, overlap 1629746 TAAAGAAGGGGAGCA TC-GCCTCGAGCACGCGGGGATCGAC CGG GGTGGTCGCCGCATGGTCGAGGTAGA TTTCGGTTCGGTTCA TERM 830 1629746 - 1629792 + g 71 -13.6 -2.68071 | opp_overlap 1629735, overlap 1629743 AGAAGGGGAGCATCG CCTCGAGCACGCGGGGATCGAC CGG GGTGGTCGCCGCATGGTCGAGG TAGATTTCGGTTCGG trd_1635 1630287 - 1629847 - | Transcriptional regulator superfamily TERM 831 1630427 - 1630450 + H 71 -8 -4.18197 | opp_overlap 1630429, overlap 1630428 TGCTATACTAAGGCA AAGGCTGGCC ATGT GGCCAGCCGC TTTTCCGTGGGAGGT TERM 832 1630448 - 1630429 - H 89 -15 -3.79787 | opp_overlap 1630428 1630427 CTATACTAAGGCAAA GGCTGGCC ATGT GGCCAGCC GCTTTTCCGTGGGAG TERM 833 1631268 - 1631232 - gH 70 -11.6 -3.40878 | overlap 1631230 AGCACGTCAACAAGA CCGAGTCCGC-GGTGCGC ATC ACGCACCTGCCGAC-CGG GATCGTGGTCACCTG prfB 1630474 - 1631599 + | peptide chain release factor 2, programmed frameshift TERM 834 1631638 - 1631690 + GF 93 -18.4 -3.53224 | gap 2 CACTCGGCCCGAGCG CGAGCCTGGCCGCACCGCGGGTCCAG TTC CAGGACCTG-GGTGCGGCC-GTCGCG TTTCCCGAGCGCATC TERM 835 1632039 - 1632083 + GF 72 -12.8 -3.12668 | gap 1, opp_overlap 1632037 1632039 GAGTACATCGAAACA GCGCTGGCGGTGAGCGAGCGG GCCA TCGTCCGCTT-CGGCCAGCGC TTCGGTGTCGCGCTC trd_1637 1631568 - 1632809 + | hypothetical protein TERM 836 1633548 - 1633572 + G 74 -10.7 -3.72576 | CCGTGGCACTCGTCC TCCAGCGTCTC GCC GAGGCGCTGCA TTTCATCGAGCACCA TERM 837 1633871 - 1633894 + G 71 -12.4 -3.22388 | gap 1, overlap 1633870 CAGCGGATGGCCTAC GCGCG-CGCCG TCG CGGCGGTGCGC TTCCTCGCTTCGGTC hrcA 1632917 - 1633963 + | heat-inducible transcription repressor HrcA grpE 1633966 - 1634622 + | co-chaperone GrpE dnaK 1634625 - 1636526 + | chaperone protein DnaK TERM 838 1637010 - 1636994 - f 70 -5.1 -4.38712 | overlap 1636996 CTGACCCCTACAAAA TGGGG GATACCG CCCCA CCGTGGCAGGCAGGT TERM 839 1637301 - 1637324 + F 80 -15.2 -3.05384 | GGGGCTTGCGGACTG AGCCCGGGGC TGAA GCCCCGGGCG TTCGGTGCCCACCAC trd_1641 1637591 - 1638094 + | hypothetical protein TERM 840 1639254 - 1639310 + G 72 -13 -3.07816 | CCGGTTATCCGGGTC GGCGCGCCAGCTTCCAG-GTGGCCAG CGGGCTC CTGACCGCGCTGCCAGC-GGCGCGCC TTCCCTGGCTGGGGG trd_1642 1638098 - 1639882 + | hypothetical protein TERM 841 1639901 - 1639886 - T 77 -5.4 -4.59773 | gap 1 GTGGAGGTGTAAAAA CCGCGAG TCC CTC-CGG GGGCCTAATCGAGCC TERM 842 1639936 - 1639914 - T 80 -16.3 -2.52464 | CGGGGGCCTAATCGA GCCCCGCTC GCGAT GAGCGGGGC TCGAGTGGAACACCT trd_1643 1641380 - 1639998 - | hypothetical protein TERM 843 1641875 - 1641860 - H 73 -6.1 -4.38712 | CTGACCCCTACAAAA TGGGG ATACCG CCCCA CCGTGGCAGGCAGGT TERM 844 1642107 - 1642082 - H 88 -10.3 -4.38712 | CTGACCCCTACAAAA CGGGGCCGGTC ACCC GACCGGAGCCG GCCATGCAGCGCACT TERM 845 1642389 - 1642412 + H 80 -15.2 -3.05384 | GGGGCTTGCGGACTG AGCCCGGGGC TTCA GCCCCGGGCG TTCGCTGCCGACCGC trd_1644 1642600 - 1643487 + | putative phage structural protein trd_1645 1643741 - 1643965 + | hypothetical protein trd_1646 1643956 - 1644768 + | hypothetical protein TERM 846 1645529 - 1645483 - g 100 -15.6 -4.41494 | opp_overlap 1645499, overlap 1645470 GACGGCGAACGAAAA CCCCGGCGCCGATGCCGAGGCG CAC CGCCGCTTCGTCCACGCCGGGG GTGGGCCGGAAGGGG trd_1647 1644884 - 1646125 + | N-acetylmuramoyl-L-alanine amidase, family 2 trd_1648 1646122 - 1646481 + | hypothetical protein trd_1649 1647521 - 1648072 + | hypothetical protein TERM 847 1648649 - 1648672 + F 80 -15.2 -3.05384 | GGGGCTTGCGGACTG AGCCCGGGGC TTCA GCCCCGGGCG TTCGCTGCCGACCAC trd_1650 1648988 - 1649143 + | hypothetical protein trd_1651 1649577 - 1649699 + | hypothetical protein trd_1654 1651063 - 1650566 - | hypothetical protein trd_1655 1651062 - 1653407 + | hypothetical protein trd_1657 1653493 - 1655085 + | putative helix-turn-helix, Fis-type trd_1656 1655489 - 1655079 - | hypothetical protein TERM 848 1655870 - 1655885 + G 80 -11.8 -3.72576 | opp_overlap 1655870 GCTTCATCGCGAAAA GCCGGG GAAG CCCGGC TTTACTGGGGAAGAC TERM 849 1655885 - 1655870 - g 85 -11.8 -4.11216 | opp_overlap 1655870 GCTTCATCGCGAAAA GCCGGG GAAG CCCGGC TTTACTGGGGAAGAC trd_1658 1655595 - 1657313 + | putative S-layer associated protein trd_1660 1657368 - 1657862 + | GAF domain protein trd_1659 1658659 - 1657838 - | glycerophosphoryl diester phosphodiesterase trd_1661 1659297 - 1658647 - | membrane-associated phospholipid phosphatase ispH 1660282 - 1659320 - | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase trd_1663 1661018 - 1660263 - | hydrolase, HAD superfamily TERM 850 1662005 - 1661975 - g 74 -11.1 -3.61398 | overlap 1661976 GTTCGCCCGCAACAA TTTCTCCCGCGTC ATCCA GACGCGGGAGATC ATGGTGCGCTACGGC TERM 851 1662004 - 1661976 - g 75 -14.6 -2.76696 | overlap 1661975 TTCGCCCGCAACAAT TTCTCCCGCGTC ATCCA GACGCGGGAGAT CATGGTGCGCTACGG trd_1665 1661112 - 1662848 + | hypothetical protein rfbD 1663659 - 1662814 - | dTDP-4-dehydrorhamnose reductase TERM 852 1663394 - 1663365 - G 71 -10.6 -3.56099 | opp_overlap 1663382 CATAATTGGTGGAAA GCGCGACCAGCG CTGCCT CGGCGGCCGCGC AGGCAGCCGCGATGT TERM 853 1663941 - 1663906 - g 75 -7.4 -4.32857 | opp_overlap 1663928, overlap 1663909 CGCTTCAAAGAGAAA GCAGCCCGCTACGGTC TCCC GACCGTCGCGCACGAC AGTTACCTCATCAAT TERM 854 1664538 - 1664526 - g 70 -5.5 -4.2349 | opp_overlap 1664535 GCTCGAGACCGAAAA GAGCC CGG AGCTC CACGAGGATGTGGAG trd_1666 1663744 - 1664589 + | probable endonuclease IV trd_1667 1664739 - 1665833 + | putative sensor kinase TERM 855 1666284 - 1666300 + G 81 -3.5 -5.00642 | overlap 1666285 AACTCTCCCGCCTCG ACCGCAC ATC GAGCGGC TTTTTCTCTCCCTTG trd_1669 1665830 - 1666567 + | transcriptional regulatory protein degU hexB 1668291 - 1666564 - | DNA mismatch repair protein HexB TERM 856 1668422 - 1668437 + H 72 -3.2 -4.62336 | overlap 1668424 GCACAGACCTCGCCC GCTTGC CGGT GCAATC TTTTTGCGATAGGGT trd_1670 1668495 - 1669871 + | RDD family protein trd_1671 1670199 - 1671893 + | putative periplasmic dipeptide transport substrate-binding protein TERM 857 1672323 - 1672357 + G 90 -6.2 -5.1356 | TCTTCAGTGCCCTAC GACGCGGTCGCTTCAC CGA GGGGATCACCCGCGTC TTTTTCTTCATCGCC trd_1672 1671941 - 1672903 + | oligopeptide ABC transporter, permease protein trd_1673 1672907 - 1673785 + | ABC transporter, membrane spanning protein (dipeptide) TERM 858 1673802 - 1673840 + F 84 -16.8 -2.87211 | opp_overlap 1673779, overlap 1673796 CGACTACCGGCCGCA GGCTGCTGCGCCTGCT CTCGCTC AGCACGCGCAGTAGCC TGTATCGCCGCCCCT trd_1674 1674458 - 1675402 + | putative sugar uptake ABC transporter permease protein trd_1675 1675407 - 1676306 + | inner membrane ABC transporter permease protein ycjP TERM 859 1677363 - 1677379 + G 73 -12.3 -3.33815 | CGGTTCTACAGCTAC CCAGCTG GTC CAGCTGG TTCATTCGGCCAGGT trd_1676 1676328 - 1677785 + | putative Bacterial extracellular solute-binding protein TERM 860 1678323 - 1678354 + G 71 -13 -2.92102 | overlap 1678323 GCGGGTCTTCTGGCA CCGCTGGACCTTTC TCCC GAAAGGACCAGCGA GTTTCTCGAGAATCT TERM 861 1678323 - 1678355 + G 86 -12.8 -3.87373 | gap 1, overlap 1678323 GCGGGTCTTCTGGCA C-CGCTGGACCTTTC TCCC GAAAGGACCAGCGAG TTTCTCGAGAATCTG trd_1677 1677867 - 1679477 + | putative groEL TERM 862 1680866 - 1680906 + G 80 -15 -3.17051 | gap 2, overlap 1680865 CTCGCCCTTCTGACG GTGCGGATGGA-AGAG-CTG CGC CAGGCTTTGTCCATCCGCAC TCTTCCTGATGGCGA trd_1678 1679498 - 1681303 + | BNR/Asp-box repeat domain protein trd_1679 1681498 - 1681884 + | GTP cyclohydrolase family protein TERM 863 1681915 - 1681898 - T 74 -11.3 -3.57462 | opp_overlap 1681904, overlap 1681901 GAGTGCACTGGTAAA CGACTGG AGCG CCAGTCG CTCTGCAGAGCGCCC trd_1680 1682299 - 1682186 - | hypothetical protein trd_1681 1682320 - 1684134 + | phosphoenolpyruvate synthase/pyruvate phosphate dikinase-like protein accB 1684173 - 1684763 + | acetyl-CoA carboxylase, biotin carboxyl carrier protein trd_1683 1684776 - 1686266 + | pyruvate carboxylase subunit B trd_1684 1686292 - 1687149 + | sugar phosphatase of the HAD superfamily trd_1685 1687163 - 1688494 + | putative phenylacetate-CoA ligase trd_1686 1688968 - 1689084 + | hypothetical protein trd_1687 1690060 - 1689092 - | lipase trd_1688 1691041 - 1690166 - | Catalytic LigB subunit of aromatic ring-opening dioxygenase superfamily trd_1689 1691196 - 1691777 + | hypothetical protein leuA 1692304 - 1693842 + | 2-isopropylmalate synthase TERM 864 1693913 - 1693873 - g 77 -11.1 -3.80877 | gap 1, overlap 1693871 CGATGGCAGAAAAGA TCCTGGCTCG-GGCGGCA GGACGT CGCCGCGTCGAGCCGGGA GAAATCATCGAGGTC TERM 865 1694022 - 1693991 - g 74 -10.9 -3.65046 | opp_overlap 1694012, overlap 1693992 CGCTGAGTTCAAGAA GCTCGGGGTCGAA CGCGTC TTCGACCCCAAGA AGGTCGTCTTCGTGC TERM 866 1694021 - 1693992 - g 73 -14.4 -2.78813 | opp_overlap 1694012, overlap 1693991 GCTGAGTTCAAGAAG CTCGGGGTCGAA CGCGTC TTCGACCCCAAG AAGGTCGTCTTCGTG leuC 1693839 - 1695107 + | 3-isopropylmalate dehydratase, large subunit TERM 867 1695564 - 1695553 - g 70 -5.8 -4.24204 | GATCGACACCGAAAA CGGA ATCG TCCG CAACCTGCGCACCGG leuD 1695182 - 1695700 + | 3-isopropylmalate dehydratase, small subunit leuB 1695697 - 1696818 + | 3-isopropylmalate dehydrogenase TERM 868 1696898 - 1696927 + F 86 -14.9 -3.44146 | overlap 1696899 CCATGAGCGTATTCG TCCGCCCCCCGTG CATG CACGAGGGGCGGC TTCGTTCTCCGACAG TERM 869 1696899 - 1696926 + F 87 -18.4 -2.66274 | overlap 1696898 CATGAGCGTATTCGT CCGCCCCCCGTG CATG CACGAGGGGCGG CTTCGTTCTCCGACA TERM 870 1698212 - 1698261 + G 82 -15.8 -3.16564 | gap 2, opp_overlap 1698197 CGGTCCTCTCCGCGT TTCCCGGCGCGACCGTCACCGTCG CGAG CGATGG-GACGGTC-CGCCAGGCA TTCGTGGCCTGGCCA trd_1694 1697437 - 1698582 + | hypothetical protein TERM 871 1699294 - 1699319 + G 88 -17.7 -3.01712 | opp_overlap 1699297 TATACGTGGGTGCAA CGAGTCGTCAG CTAC CTGACGACTCG TGTTCCCCGCGAGAA trd_1695 1698610 - 1700283 + | spore peptidoglycan hydrolase aroQ 1700280 - 1700735 + | 3-dehydroquinate dehydratase, type II TERM 872 1700974 - 1701005 + G 78 -13.6 -3.29144 | CGAGGTGTTCGATCG CGAGCGCGACTTCG CCCG CGGCGACGCGCTCG TTCTCCAGGAGATGG trd_1697 1700732 - 1701835 + | PepQ efp 1701932 - 1702492 + | translation elongation factor P accB 1702495 - 1702974 + | acetyl-CoA carboxylase, biotin carboxyl carrier protein xseA 1702987 - 1704204 + | exodeoxyribonuclease VII, large subunit xseB 1704217 - 1704507 + | exodeoxyribonuclease VII, small subunit TERM 873 1704881 - 1704846 - f 71 -13.3 -3.01712 | gap 1, overlap 1704851 CCGGCCCCTCCAACA CGCAACACGTGGGCGA TGGCG CCGCCC-CGTGGTGCG CACCTGTCGAACCGC trd_1702 1705552 - 1705680 + | hypothetical protein trd_1703 1705817 - 1707745 + | serine proteinase TERM 874 1707767 - 1707808 + F 100 -21.6 -3.53012 | opp_overlap 1707772, overlap 1707770 GAGCGCCTGCCACGA CCACACGGGCCGGCCGAG AGCGCG CTCCGCCGGCCCGTGTCG TTTGGCACGACCGCA TERM 875 1707770 - 1707805 + F 100 -21.9 -2.90496 | opp_overlap 1707772, overlap 1707767 CGCCTGCCACGACCA CACGGGCCGGCCGAG AGCGCG CTCCGCCGGCCCGTG TCGTTTGGCACGACC TERM 876 1707803 - 1707772 - f 89 -18.7 -2.82516 | opp_overlap 1707770 1707767 CCTGCCACGACCACA CGGGCCGGCCGAG AGCGCG CTCCGCCGGCCCG TGTCGTTTGGCACGA trd_1704 1708080 - 1708667 + | hypothetical protein TERM 877 1708729 - 1708672 - f 100 -21.4 -2.70932 | gap 2, opp_overlap 1708681 GTGTGTTCTGAACGA GCGCGACGAGCAGCCTGGGTAGCGCGCG TGGT CGCTCGCTACCCGGGCTGCT-GT-GTGC CATCGCGTGAGGCCG TERM 878 1708681 - 1708722 + F 100 -28.1 -2.89683 | opp_overlap 1708672 GAACGAGCGCGACGA GCAGCCTGGGTAGCGCGCG TGGT CGCTCGCTACCCGGGCTGC TGTGTGCCATCGCGT trd_1705 1708864 - 1709529 + | hypothetical transcriptional regulator trd_1707 1710059 - 1710274 + | hypothetical protein trd_1708 1710292 - 1711005 + | molybdenum cofactor biosynthesis protein D/E trd_1709 1712241 - 1711015 - | putative molybdopterin biosynthesis protein trd_1710 1712620 - 1712495 - | hypothetical protein TERM 879 1713315 - 1713279 - g 73 -13.7 -2.82015 | CGCAGACCTACGAGA CGATCGCACGCGCGC TCGAGTC GCGCGGGCACGATCG TGAGCAGTATCTCCA trd_1711 1712681 - 1714843 + | GTP pyrophosphokinase trd_1712 1716254 - 1714851 - | putative GTPase of unknown function subfamily trd_1713 1717846 - 1716317 - | RNA polymerase sigma 70 subunit, RpoD lysA 1719277 - 1717928 - | diaminopimelate decarboxylase TERM 880 1719901 - 1719916 + G 79 -10.4 -4.09685 | overlap 1719895 CAGCGGACCCGCCTC GCGCTC GCGC GAGCGC TTTTGAGCGATCCCG trd_1715 1719328 - 1721295 + | ABC transporter, ATP-binding protein TERM 881 1721500 - 1721525 + G 79 -6.9 -4.56597 | gap 1, overlap 1721508 1721509 CCCCGACGGTTCACT CGATCGGCGC GCGCTCG GCG-CGATCG TTTTTCGCGACCCCG coaE 1721297 - 1722046 + | dephospho-CoA kinase trd_1717 1722108 - 1723181 + | glutamine amidotransferase, class II/dipeptidase trd_1718 1723307 - 1724476 + | srebp protease/cbs domain trd_1719 1725596 - 1724484 - | hypothetical protein trd_1720 1727245 - 1725593 - | hypothetical protein trd_1721 1727884 - 1727276 - | hypothetical protein dtd 1728427 - 1727963 - | D-tyrosyl-tRNA(Tyr) deacylase ispF 1728942 - 1728433 - | 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase ispD 1729634 - 1728939 - | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase trd_1725 1730767 - 1729634 - | nucleotide binding protein, PINc TERM 882 1730083 - 1730059 - G 89 -12.7 -4.09739 | opp_overlap 1730080 GCAAGCGCCGCAAAA GCTCGAGGCCG CGC CGGCCACGCGC TCGTCGGGGAGGGTC trd_1726 1731658 - 1730801 - | putative PHP domain TERM 883 1731670 - 1731707 + r 86 -15.5 -3.29461 | opp_overlap 1731670 1731674 CCATGAGCGGGAAAA CGAACTGCCCCCAGCCA GTCC TGGCTGGGGGCAGCGAG TTCTCAGCGCGGTTC TERM 884 1731707 - 1731670 - R 100 -17.7 -4.12188 | opp_overlap 1731670, overlap 1731674 CCATGAGCGGGAAAA CGAACTGCCCCCAGCCA GTCC TGGCTGGGGGCAGCGAG TTCTCAGCGCGGTTC TERM 885 1731703 - 1731674 - R 100 -23.7 -3.67622 | opp_overlap 1731670, overlap 1731670 GAGCGGGAAAACGAA CTGCCCCCAGCCA GTCC TGGCTGGGGGCAG CGAGTTCTCAGCGCG trd_1727 1732109 - 1731711 - | spoVS-related protein pyk 1734059 - 1732620 - | pyruvate kinase TERM 886 1733247 - 1733259 + g 76 -9.1 -4.09685 | opp_overlap 1733239 GAAGGCACGGGCAAC GCGGA TGA TCCGC TTTTGCGCGATGGGC trd_1729 1734271 - 1734672 + | alchohol dehydrogenase trd_1730 1734690 - 1735049 + | zinc-dependent alcohol dehydrogenase trd_1732 1735336 - 1735839 + | hypothetical protein trd_1731 1735939 - 1735820 - | hypothetical protein trd_1733 1735954 - 1736967 + | TPP-dependent acetoin dehydrogenase alpha-subunit trd_1734 1736986 - 1737990 + | pyruvate dehydrogenase E1 component, beta subunit aceF 1738021 - 1739349 + | pyruvate dehydrogenase complex, E2 component, dihydrolipoamide acetyltransferase TERM 887 1739367 - 1739408 + F 100 -25.9 -3.90744 | AGGGTTCGGGCACCT CGAGCGAGCCTGCCGGCTG TAAG CGGTCGGCAGGCTCGCGCG TTGTTTCGGCAGAGC trd_1736 1739547 - 1741643 + | hypothetical protein TERM 888 1741653 - 1741708 + T 72 -8.2 -4.18018 | opp_overlap 1741683 1741684, overlap 1741654 1741658 1741659 CCCTGAGCACCAGGT G-CATCGGCTCCCGCCCGGGACGAGC TGAAAC GCGC-TCTCGGGCGGGAGCGTCTGTC TTTTCGCTGGCCACG TERM 889 1741654 - 1741706 + T 80 -11.9 -3.69216 | gap 1, opp_overlap 1741683 1741684, overlap 1741653 1741658 1741659 CCTGAGCACCAGGTG CATCGGCTCCCGCCCGGGACGAGC TGAAAC GCGC-TCTCGGGCGGGAGCGTCTG TCTTTTCGCTGGCCA TERM 890 1741658 - 1741702 + T 86 -15.7 -3.2785 | gap 1, opp_overlap 1741683 1741684, overlap 1741654 1741653 1741659 AGCACCAGGTGCATC GGCTCCCGCCCGGGACGAGC TGAAAC GCGC-TCTCGGGCGGGAGCG TCTGTCTTTTCGCTG TERM 891 1741659 - 1741701 + T 89 -19.2 -2.55987 | gap 1, opp_overlap 1741683 1741684, overlap 1741658 1741654 1741653 GCACCAGGTGCATCG GCTCCCGCCCGGGACGAGC TGAAAC GCGC-TCTCGGGCGGGAGC GTCTGTCTTTTCGCT trd_1737 1742153 - 1741779 - | hypothetical protein trd_1738 1742513 - 1742154 - | hypothetical protein trd_1739 1742912 - 1742571 - | hypothetical protein uvrA 1743012 - 1745897 + | excinuclease ABC, A subunit trd_1741 1746044 - 1746664 + | putative endonuclease serS 1746722 - 1748059 + | seryl-tRNA synthetase trd_1743 1748063 - 1749118 + | hypothetical protein trd_1744 1749143 - 1749973 + | Prokaryotic protein of unknown function (DUF849) trd_1745 1749980 - 1751455 + | MlrC C-terminus family trd_1746 1755023 - 1751460 - | putative chromosome segregation protein galE 1756027 - 1755038 - | UDP-glucose 4-epimerase ppa 1756722 - 1756042 - | inorganic pyrophosphatase trd_1749 1757378 - 1756464 - | thiosulfate sulfurtransferase TERM 892 1757483 - 1757453 - R 73 -14.1 -2.80816 | gap 1, opp_overlap 1757462 CGCCCATGCACGAGA CCGGCAAGG-GGAG ATGC CTCCTCCTTGCCAG TCTCGATCATACCGA trd_1750 1758234 - 1757503 - | putative periplasmic immunogenic protein TERM 893 1757691 - 1757718 + g 78 -15.6 -2.70932 | gap 1 GTTGGGCTGCCTTCT CGCGGGCATCGCG AAC CGCGA-GCTCGCG TGCTTGCCGCAGCGC TERM 894 1758336 - 1758321 - R 77 -11.8 -3.62275 | ACGCACGACCGGAAA CCGGCG GACC CGCCGG GCAGGTAAGAGAAAC trd_1751 1758971 - 1758300 - | hypothetical protein trd_1752 1759604 - 1758981 - | RNA polymerase sigma-H factor trd_1753 1759722 - 1759967 + | hypothetical protein trd_1754 1760115 - 1760855 + | putative two-component system response regulator trd_1755 1761256 - 1760861 - | Septum formation initiator family trd_1756 1762729 - 1761260 - | glutamyl-tRNA(Gln) amidotransferase subunit A gatC 1763032 - 1762739 - | glutamyl-tRNA(Gln) amidotransferase, C subunit trd_1758 1764435 - 1763077 - | beta-glucosidase A TERM 895 1763594 - 1763579 - G 70 -4.6 -4.45083 | TTGATACCCAGAAAA TCGAGC GGCT GCGCGA TGGTCGGGAGATCGG trd_1759 1766178 - 1764490 - | DNA polymerase III subunit gamma/tau TERM 896 1764666 - 1764627 - G 81 -11.2 -4.15044 | opp_overlap 1764627 1764629, overlap 1764628 CGTCTTCCGAAGAAA GCGGCTCCCCGGCCGCTG TGGT CAGCTGCCGGGGCACGTC TTCCGGCGCGAGACA TERM 897 1765233 - 1765219 - G 70 -11.4 -3.35679 | TTCCTCGAGCGAGAA GCGCTG AGC CAGCGC TGATGCCTCGGGCGG TERM 898 1765328 - 1765301 - G 77 -12 -3.64822 | overlap 1765302 1765305 AGTGTCCGAGTGAAA CGGACCAGCTCG CGAC CGAGCTGGTGCA GGTCATCGCCCGCAT TERM 899 1765324 - 1765305 - G 71 -13.6 -2.66272 | overlap 1765302 1765301 TCCGAGTGAAACGGA CCAGCTCG CGAC CGAGCTGG TGCAGGTCATCGCCC TERM 900 1766004 - 1766024 + g 71 -7.6 -4.11216 | gap 1 AGTTGACCGCCTTGG CCAGCA-GG CGCG CCGTGCTGG TTTTCCCGGTACCGC TERM 901 1766105 - 1766053 - G 70 -5.4 -4.36914 | gap 1, opp_overlap 1766087 1766090, overlap 1766056 GCGCGGCCCACAAAA CAGGTAGGCGTGCGCCACCCGGTCG AGGG CGACCGCATTGCGCA-GCGTGCGCG CGATGGCTTCCTGTC TERM 902 1766619 - 1766639 + G 70 -7.5 -4.03078 | overlap 1766618 TGCCAGGCCCTTCGG CAGTGACAG CTG CTGTCGCGG TTTCTGGTCTGGTGA TERM 903 1766944 - 1766909 - g 71 -12.5 -3.23692 | gap 1, opp_overlap 1766910 TACGAGCAGCACGAA CCCCGCGGCGA-GTTC GTGCT GGTCATCGCCGCGGGG AGCCGGGAGCATCCC trd_1760 1766282 - 1767166 + | conserved hypothetical protein TIGR00096 TERM 904 1767326 - 1767340 + G 75 -6.4 -4.33417 | overlap 1767328 TCCACCGTTCGTGGC TGGGGA AAG TCCCTA TTTCTTGTCGGTCAA trd_1761 1767144 - 1768382 + | L-carnitine dehydratase/bile acid-inducible protein F fad 1768379 - 1769164 + | enoyl-CoA hydratase trd_1763 1770482 - 1769496 - | hypothetical protein trd_1764 1770852 - 1770733 - | hypothetical protein trd_1765 1770965 - 1771081 + | hypothetical protein trd_1766 1771149 - 1771319 + | hypothetical protein trd_1767 1771902 - 1771342 - | oxidoreductase trd_1768 1772124 - 1772783 + | putative Uncharacterized BCR, YitT family trd_1769 1772770 - 1773159 + | hypothetical protein TERM 905 1773162 - 1773200 + T 88 -13.9 -3.9392 | gap 1, opp_overlap 1773163 1773164, overlap 1773163 GAGCGATAGCTGAAA AGGGAGAGAGGCAGGAGG CACT CC-CCTGCCTCTCTCCGG TTGTTTCACGTGAAA TERM 906 1773199 - 1773163 - T 100 -18.8 -4.1721 | opp_overlap 1773163 1773162, overlap 1773164 AGCGATAGCTGAAAA GGGAGAGAGGCAGGAG GCACT CCCCTGCCTCTCTCCG GTTGTTTCACGTGAA TERM 907 1773163 - 1773199 + T 88 -17.4 -2.96031 | gap 1, opp_overlap 1773163 1773164, overlap 1773162 AGCGATAGCTGAAAA GGGAGAGAGGCAGGAGG CACT CC-CCTGCCTCTCTCCG GTTGTTTCACGTGAA TERM 908 1773198 - 1773164 - T 100 -22.3 -3.09844 | opp_overlap 1773163 1773162, overlap 1773163 GCGATAGCTGAAAAG GGAGAGAGGCAGGAG GCACT CCCCTGCCTCTCTCC GGTTGTTTCACGTGA trd_1770 1773671 - 1773222 - | nucleoside diphosphate kinase TERM 909 1773715 - 1773695 - RH 71 -14 -2.66274 | overlap 1773694 CCTCCGACAACGAAC GCGGGCGA TCCCC TCGCCCGC CACCGCCACGTCCTT trd_1771 1775281 - 1773746 - | Tetratricopeptide repeat family TERM 910 1774611 - 1774581 - GH 70 -14 -2.52623 | overlap 1774580 1774578 TCCGGCCCACAATAC CGCTCGATCCCCTC ACC GACCGGATCGAGCG CCAACAAGCGTTCGC TERM 911 1774786 - 1774770 - GH 73 -9.4 -3.9398 | overlap 1774761 1774781 1774782 CCAGAACGCCACAAA CAGCGG ATCAA CCGCTG CCGCACGTCGACGCG trd_1772 1775274 - 1775438 + | hypothetical protein trd_1774 1775410 - 1776393 + | hypothetical protein TERM 912 1776370 - 1776383 + T 75 -3.1 -4.76644 | gap 1, overlap 1776367 GCTCCTCCCTATCAC CG-GAC ACG GTCTCG TTTTTACTGAGTCTT trd_1773 1777526 - 1776387 - | sarcosine oxidase TERM 913 1776443 - 1776423 - G 88 -8.9 -4.66833 | overlap 1776439 GCGGAAGCTCAAAAA GCCGATCGG TAA CCGACTGGC GCCTTCCAGTGCGAG TERM 914 1777364 - 1777378 + g 81 -11.4 -4.13767 | ACTCGAAGTAGGCCT CGCGGA TGA TCCGCG TTTTCCCGTGCGACG trd_1775 1778034 - 1777630 - | hypothetical protein trd_1776 1778077 - 1780617 + | metal-transporting P-type ATPase TERM 915 1780968 - 1780992 + G 77 -13.5 -3.37017 | overlap 1780955 TTTGGCTGCACTGTG GGGACGCCTCC TCT GGGAGCGTCCC TTCGTGTTGACCGTT trd_1778 1780636 - 1781853 + | putative mannosyl transferase trd_1777 1784072 - 1781835 - | phosphoglycerate dehydrogenase SerA trd_1779 1784093 - 1784266 + | hypothetical protein TERM 916 1784498 - 1784462 - f 80 -16 -2.80994 | gap 1, overlap 1784483 TGGAACGCCAGCAGA CTCGCAGCATCGCTCGC TAAA GCGAGCGATGCT-CGAT ACGGAATCCGGCCAG trd_1780 1784633 - 1784992 + | nadh ubiquinone oxidoreductase chain a nuoB 1784983 - 1785540 + | nadh dehydrogenase i, b subunit TERM 917 1785674 - 1785697 + G 79 -6.6 -4.56597 | overlap 1785660 1785666 TGCGGGAGCGCTTTC CCGATGCCTT CGAG GAGGCGACGG TTTTTCGCGACGAGA trd_1782 1785553 - 1786167 + | nadh-quinone oxidoreductase chain c TERM 918 1786365 - 1786391 + G 73 -12.2 -3.37344 | opp_overlap 1786365 1786364 CGGGGAGTCGAGAAG CTGGGCGAGTCG CAC CGGTACGCCCAG TTCGTTCCCTGGACC nuoD 1786164 - 1787393 + | NADH dehydrogenase I, D subunit TERM 919 1787697 - 1787733 + G 71 -7.3 -4.11216 | gap 1 GCACTGGCGCCGCTC GGTGCGGCG-GTCATC CCGTTC GGTGACACGCTGCAGC TTTTCGGAATCGAGA trd_1784 1787424 - 1788449 + | nadh-quinone oxidoreductase chain h trd_1785 1788472 - 1789197 + | nadh dehydrogenase i chain j trd_1786 1789194 - 1789502 + | nadh dehydrogenase subunit 4l trd_1787 1789515 - 1791416 + | nadh dehydrogenase i chain 5 trd_1788 1791438 - 1793012 + | nadh-quinone oxidoreductase chain m trd_1789 1793027 - 1794514 + | nadh dehydrogenase chain n TERM 920 1795071 - 1795081 + G 75 -6.8 -4.36914 | overlap 1795059 1795067 CCTGCACCGCGCGAG GCGA TGC TCGC TTTTCTGACCCAGGA trd_1790 1794540 - 1795469 + | putative acetyltransferase trd_1791 1795515 - 1796708 + | hypothetical protein trd_1792 1797945 - 1796743 - | class I aminotransferase protein TERM 921 1797258 - 1797245 - G 71 -4.5 -4.56775 | AGCGTCTTCGAAAAA CTCCC CAGC GAGAG CACCTCGTCCCAGAA TERM 922 1797838 - 1797812 - G 72 -10.9 -3.53012 | gap 2 GGCTCGGCCGGTAAA CACTCGAGCGGGG GTG CCCCGC-CG-GTG AAATGGATGACATCG trd_1793 1798697 - 1797942 - | alanyl-tRNA synthetase trd_1794 1799519 - 1798845 - | putative Phosphoribosyl transferase domain TERM 923 1800361 - 1800338 - g 71 -13.9 -2.73875 | overlap 1800335 TTGCCTCCAACATCA CCCGGATCG ATCAGG CGATCCGGG CAGCGCATCGCCATG TERM 924 1801186 - 1801171 - g 81 -4.6 -4.8622 | overlap 1801172 CTGGCCAAGCAAAAA GGTGGC TTCA GCCACG GCTACCTGGTCAGTC trd_1795 1799623 - 1801284 + | metallo-beta-lactamase family protein trd_1796 1801651 - 1801298 - | putative cytochrome oxidase assembly protein trd_1797 1802308 - 1801676 - | hypothetical protein trd_1798 1802287 - 1802967 + | exsB protein ychF 1803015 - 1804118 + | GTP-binding protein YchF trd_1801 1804139 - 1806601 + | hypothetical protein trd_1800 1806739 - 1806581 - | hypothetical protein trd_1802 1807439 - 1806792 - | Class II Aldolase and Adducin N-terminal domain protein trd_1803 1808337 - 1807462 - | succinyl-CoA synthetase alpha chain trd_1804 1809524 - 1808352 - | succinyl-CoA synthase, beta subunit trd_1805 1809561 - 1809698 + | hypothetical protein trd_1806 1809911 - 1811593 + | 3-ketosteroid dehydrogenase TERM 925 1812271 - 1812299 + G 75 -11.8 -3.51232 | gap 2, overlap 1812282 TGCGGCATTCGCGTT CCGCCACCGTGGCG AAC CGC-AC-GTGGCGG TTGCTTTCGCCGGGG trd_1807 1811804 - 1812841 + | TPP-dependent acetoin dehydrogenase alpha-subunit trd_1808 1812838 - 1813857 + | acetoin:2,6-dichlorophenolindophenol oxidoreductase beta subunit TERM 926 1813873 - 1813904 + T 100 -20.9 -4.26188 | overlap 1813874 GCGAGTCGGCACCAG TGGGCGCCGGGGA AAAGCA TCCCCGGCGCCCG TTTTCGCTCTCTCAG TERM 927 1813874 - 1813903 + T 100 -22.2 -3.15231 | overlap 1813873 CGAGTCGGCACCAGT GGGCGCCGGGGA AAAGCA TCCCCGGCGCCC GTTTTCGCTCTCTCA trd_1809 1814804 - 1813929 - | universal stress protein TERM 928 1814907 - 1814952 + H 77 -16.2 -2.52896 | overlap 1814904 GCAGCCTACCACGCA CGCGCTGAGCTGTCAGCATG CGCTAT CATGCCGACAGGTCGGTGCG TCGGTTCAGCGCTGA trd_1810 1814979 - 1816040 + | putative oxidoreductase protein trd_1811 1817093 - 1816098 - | hypothetical protein trd_1812 1817661 - 1817158 - | hypothetical protein trd_1813 1820845 - 1817675 - | putative sensory box protein trd_1814 1821151 - 1820999 - | hypothetical protein TERM 929 1821059 - 1821088 + gr 100 -19.4 -3.53012 | opp_overlap 1821052, overlap 1821053 1821050 TCGACAGATGCGGAA GGGCCGCTCTTC CTGAGC GAAGAGCGGCCC TTTGGAGAGAACGAA trd_1815 1824483 - 1821115 - | B12-dependent ribonucleoside diphosphate reductase TERM 930 1821314 - 1821371 + gr 78 -16.2 -2.70708 | gap 2, overlap 1821347 AGTGCGGCGGCCAGT TCGGCCTGGCCGTCGACGCGCGGCTTCG GGCT CGGAGC-GCGCGGCGCCGGCT-GGTCGC TCGTCTCGTTCGCTT trd_1816 1825525 - 1824860 - | response regulator uvrY trd_1817 1826589 - 1825522 - | probable transmembrane two component system sensor kinase transcription regulator protein TERM 931 1826607 - 1826623 + r 90 -11.5 -4.40123 | TCAGTGGTGGTCCTC GTGCCGC TCA GCGGCGC TTCTTCTTTTTCTTC ffh 1828080 - 1826614 - | signal recognition particle protein TERM 932 1827076 - 1827117 + g 83 -2.3 -5.11112 | overlap 1827076 CTTGACCTGTTGCAA CTGC-CGCAGGAAGTCTTC CAGATC GAAGG-TGCCCGCGAGCAG TTTTTCTTGGAGTTT TERM 933 1827251 - 1827232 - G 71 -4.3 -4.4891 | gap 1, overlap 1827233 CCGATCAGGATAAAA GGGTTCGA GCGCA TCGA-CCC GCTCACCGGTTCCGA ftsY 1829045 - 1828083 - | signal recognition particle-docking protein FtsY trd_1820 1829229 - 1830014 + | DNA repair protein radC homolog trd_1821 1830117 - 1830530 + | hypothetical protein trd_1822 1832645 - 1830537 - | N-acetylmuramoyl-L-alanine amidase domain protein TERM 934 1832930 - 1832949 + G 72 -11.4 -3.48276 | AGCTCGAACTGGCGA CCCGTGCG GCCT TGCACGGG TTGTGTGCCCAACGG trd_1823 1832767 - 1833630 + | hypothetical protein TERM 935 1834583 - 1834609 + G 71 -10.8 -3.67597 | AGTTACGTCTGGCCG CGCGATGGCG CGCTCAT CGCCAGCGCG TTGTTGGATGCCGGC TERM 936 1835597 - 1835628 + G 100 -22.4 -3.767 | overlap 1835600 CGCTATCTCGAACGC GAAGGCCAGCTCGC GGCG GCGGGCTGGCCTTC TTTCCTCGCTCCCTG TERM 937 1835600 - 1835625 + G 100 -18.3 -4.015 | overlap 1835597 TATCTCGAACGCGAA GGCCAGCTCGC GGCG GCGGGCTGGCC TTCTTTCCTCGCTCC trd_1824 1833647 - 1835644 + | Glycosyl hydrolase, family 15 trd_1825 1837164 - 1835659 - | aldehyde dehydrogenase aldh TERM 938 1836053 - 1836039 - G 79 -10 -4.08216 | GCACCTCGTCGAAAA TCGTCG GCT CGACGA AGTTCCCGCGCTGGA trd_1826 1837527 - 1837252 - | YCII-related domain superfamily phoU 1838259 - 1837543 - | phosphate transport system regulatory protein PhoU pstB 1839222 - 1838368 - | phosphate ABC transporter, ATP-binding protein TERM 939 1838781 - 1838830 + g 77 -12.7 -3.4252 | CGACGATCTCATCCG CTTCCGTGCGGGAGAGCCGTTGC CGGT GCAAGCGCACTCCCGCGAGGACG TTGTCGTAGATCGAG pstB 1840055 - 1839243 - | phosphate ABC transporter, ATP-binding protein pstA 1840965 - 1840069 - | phosphate ABC transporter, permease protein PstA pstC 1841936 - 1840962 - | phosphate ABC transporter, permease protein PstC TERM 940 1841999 - 1841960 - R 84 -17.8 -2.70932 | opp_overlap 1841963 1841964 CTCGCTCGGCAACGA CCGGCCGCGAGCAGGAGG ACTT CCTCCTGCTCGCGGATTG TACCCGGTCTTCTCG TERM 941 1841963 - 1841996 + r 100 -22.5 -3.31248 | opp_overlap 1841960, overlap 1841964 GCTCGGCAACGACCG GCCGCGAGCAGGAGG ACTT CCTCCTGCTCGCGGA TTGTACCCGGTCTTC TERM 942 1841964 - 1841995 + r 100 -26 -2.58427 | opp_overlap 1841960, overlap 1841963 CTCGGCAACGACCGG CCGCGAGCAGGAGG ACTT CCTCCTGCTCGCGG ATTGTACCCGGTCTT pstS 1843193 - 1842027 - | phosphate ABC transporter, periplasmic phosphate-binding protein trd_1833 1843957 - 1843196 - | phosphate regulatory protein trd_1834 1844393 - 1844019 - | hypothetical protein TERM 943 1844482 - 1844444 - R 73 -14.7 -2.52464 | gap 1, overlap 1844449 TGTCTCGTGAACGGA CGAGAGCGGCCGCTCG AGGTAGGA CGAGCGACCGCTCT-G CCATCCGGACACGAT TERM 944 1844478 - 1844449 - R 73 -14.3 -2.82933 | overlap 1844444 CGTGAACGGACGAGA GCGGCCGCTCG AGGTAGGA CGAGCGACCGC TCTGCCATCCGGACA trd_1835 1844784 - 1844518 - | hypothetical protein trd_1836 1845494 - 1844895 - | n-acetyltransferase, gnat family trd_1837 1845586 - 1846323 + | Protein of unknown function superfamily trd_1838 1847803 - 1846343 - | Type I phosphodiesterase / nucleotide pyrophosphatase superfamily TERM 945 1847528 - 1847478 - G 71 -13.9 -2.78384 | gap 1, opp_overlap 1847517 1847523 CGCGCGGCGAGGAGA TCGGCGAGCGGCGGGCGCAGGATC GCCC GACCCTGCGTCCGCCGATCGA-GT TCCGCGATTTGTCGA trd_1839 1849521 - 1847821 - | oligopeptide ABC transpoter oligopeptide-binding protein trd_1840 1850544 - 1849639 - | dipeptide transport system permease protein dppC trd_1841 1851468 - 1850548 - | putative transport system permease protein TERM 946 1850677 - 1850640 - G 84 -14.1 -3.57783 | CCACGATAAGCAGAA CGCCGTACTGGACGACC GGGA AGTCGCGCAGTTCGGCG GCTCGAGCCAAGAGT TERM 947 1850728 - 1850716 - G 72 -3.3 -4.63218 | overlap 1850718 1850719 CCCGGGCCAAGAAAA GACGG TCT CGGTC ACGACCGCTCCCGCG trd_1842 1851599 - 1852144 + | aut protein mviN 1852337 - 1853971 + | integral membrane protein MviN trd_1844 1853968 - 1854099 + | hypothetical protein trd_1845 1854099 - 1855397 + | cytosine deaminase trd_1846 1855476 - 1856105 + | Protein of unknown function (DUF820) family TERM 948 1856190 - 1856149 - T 95 -12.9 -4.25104 | opp_overlap 1856144 1856143, overlap 1856153 TTCCGGCGAGGAAAA GCAAGACCGGCAGCACCTA CCGG TGGGTGCTGCCGGTCGGTC ATCGCGTTCATCGGT TERM 949 1856186 - 1856153 - T 100 -21.1 -3.71672 | opp_overlap 1856144 1856143, overlap 1856149 GGCGAGGAAAAGCAA GACCGGCAGCACCTA CCGG TGGGTGCTGCCGGTC GGTCATCGCGTTCAT trd_1847 1858532 - 1856205 - | carbon monoxide dehydrogenase large chain TERM 950 1858665 - 1858635 - R 100 -13.2 -5.0925 | opp_overlap 1858636 GGGGAAAAGGAAAAA TCGAGGGCCCCGTG TGT CGTGGGACCCTCGA AGGCATCTTTCTCGT trd_1848 1861150 - 1858691 - | carbon monoxide dehydrogenase large chain trd_1849 1861947 - 1861147 - | glycosyl transferase, family 2:Glycosyl transferase, group 1 trd_1850 1862028 - 1862915 + | glyoxalase family protein trd_1851 1863983 - 1862922 - | putative peptidase trd_1852 1864995 - 1863994 - | glyoxylate reductase TERM 951 1864677 - 1864717 + g 74 -13.1 -3.28712 | overlap 1864680 CACCGTGGCAGTTGG CGACGACGATGCCGCGCCG GGT CGCCTCGGCAACGTCGATG TTGTCGAAGCCGACG TERM 952 1864680 - 1864714 + g 77 -15.6 -2.52623 | overlap 1864677 CGTGGCAGTTGGCGA CGACGATGCCGCGCCG GGT CGCCTCGGCAACGTCG ATGTTGTCGAAGCCG TERM 953 1864925 - 1864907 - G 90 -11.7 -4.36914 | overlap 1864884 1864883 CGCTCTTCGAGAAAA CGCGCGA TCTCC TCGCGCG CCGAGAAATACTTCC trd_1854 1865112 - 1865366 + | putative YGGT family trd_1853 1866486 - 1865350 - | putative hydantoinase trd_1855 1868035 - 1866491 - | hydantoinase TERM 954 1867593 - 1867579 - GR 74 -12.8 -3.21276 | opp_overlap 1867591, overlap 1867535 1867577 TTGCTGGCGAGAAGA CGGCGG TGA CCGCCG CGGAACTGATTCCCA trd_1856 1868615 - 1867971 - | hypothetical protein trd_1857 1868693 - 1868923 + | Bacterial protein of unknown function (DUF951) TERM 955 1869487 - 1869516 + G 75 -10.7 -3.85505 | gap 1, opp_overlap 1869482 TGGTCATCAAGCTCG TCGGCGTC-CGAGC AGT GCTCGCGGCGACGA TTCTGTTCTTCGTGC trd_1859 1868916 - 1870232 + | transporter, major facilitator family trd_1858 1870527 - 1870207 - | hypothetical protein trd_1860 1871455 - 1870562 - | inner membrane ABC transporter permease protein yddQ trd_1861 1872483 - 1871467 - | dipeptide transport system permease protein dppB trd_1862 1874334 - 1872520 - | putative dipeptide ABC transporter hypF 1876812 - 1874536 - | [NiFe] hydrogenase maturation protein HypF TERM 956 1876207 - 1876159 - G 88 -15.9 -3.39895 | opp_overlap 1876193 TTTCCCAGCAACCAA CCAGCTAGCCGCCAGACGAACGG CAT CCTCTCCTCGGGCGACGAGCTGG CCCGTTGCTGTGCAC trd_1864 1877023 - 1876796 - | glutaredoxin 3 TERM 957 1876909 - 1876928 + g 76 -13.6 -3.08679 | GACGCTGGCGTGCAT CGACGTCG GCAT CGACGTCG TATTCGATGAACGCG trd_1865 1878197 - 1877010 - | phosphoheptose isomerase hypE 1879265 - 1878225 - | hydrogenase expression/formation protein HypE hypD 1880383 - 1879268 - | hydrogenase expression/formation protein HypD trd_1868 1880633 - 1880370 - | hydrogenase maturation factor TERM 958 1880575 - 1880539 - G 77 -15.1 -2.83715 | overlap 1880568 GCCACGACCACGACA GGGACAGCGAGGTCACC ACA GGTGACACAGCCGTCCC GATCGAGGGTACAGC hypC 1880895 - 1880620 - | hydrogenase assembly chaperone HypC/HupF hypB 1881586 - 1880864 - | hydrogenase accessory protein HypB trd_1871 1881974 - 1881579 - | probable hydrogenase nickel incorporation protein hypA trd_1872 1882229 - 1881990 - | hypothetical protein trd_1873 1882897 - 1882379 - | F420-nonreducing hydrogenase trd_1874 1884183 - 1882882 - | hypothetical protein trd_1875 1884821 - 1884180 - | hypothetical protein trd_1876 1885456 - 1884827 - | hypothetical protein TERM 959 1885519 - 1885555 + r 80 -14.5 -3.15999 | opp_overlap 1885524, overlap 1885522 AACGACCGGTGGGCA GAGCAGCTCTCCCGGTT CCC AAGCTGGAGAGCTGTTC TTAGATCTCTGGCAA TERM 960 1885522 - 1885552 + r 80 -12.6 -3.72231 | opp_overlap 1885524, overlap 1885519 GACCGGTGGGCAGAG CAGCTCTCCCGGTT CCC AAGCTGGAGAGCTG TTCTTAGATCTCTGG trd_1877 1887322 - 1885556 - | nickel-dependent hydrogenase, large subunit trd_1878 1888403 - 1887363 - | nickel-dependent hydrogenase, small subunit trd_1879 1889115 - 1890644 + | metal-dependent phosphohydrolase, HD region TERM 961 1890652 - 1890682 + F 100 -22.7 -4.06055 | CGCGCTAGCGAGTCC GAGCCGGTACCCC GTTTG GGGGTACCGGCTC TTTCGTTTGCGCGAT trd_1880 1891052 - 1891399 + | hypothetical protein TERM 962 1891419 - 1891454 + T 75 -7.6 -4.25104 | gap 1, opp_overlap 1891418 1891420 1891425, overlap 1891420 1891423 CAGTTCACACTGAAG AGAGTACCGCCCGGT TGCCCTC GCCGGGCGGTA-TCG TTTTGCTCAACGCCG TERM 963 1891423 - 1891451 + T 76 -13.9 -3.13504 | opp_overlap 1891420 1891418 1891425, overlap 1891420 1891419 TCACACTGAAGAGAG TACCGCCCGGT TGCCCTC GCCGGGCGGTA TCGTTTTGCTCAACG trd_1881 1892042 - 1891461 - | FHA domain protein trd_1882 1892650 - 1892039 - | hypothetical protein trd_1883 1893857 - 1892658 - | putative multidrug-efflux transporter trd_1884 1894058 - 1895095 + | L-allo-threonine aldolase trd_1885 1895578 - 1895105 - | putative DinB family protein trd_1886 1895682 - 1895566 - | hypothetical protein trd_1887 1897286 - 1895679 - | hypothetical protein trd_1889 1897616 - 1897897 + | putative pterin-4-alpha-carbinolamine dehydratase trd_1888 1898562 - 1897894 - | hydrolase TERM 964 1900157 - 1900127 - g 76 -9.7 -4.07687 | gap 1 ACGGGCCCGCGAAAA GCTCGCCGCCTACC TCGC GGCACG-GGCGAGC AGCGCGACGGCGTGA gltX 1898652 - 1900172 + | glutamyl-tRNA synthetase trd_1891 1900227 - 1900427 + | hypothetical protein TERM 965 1900444 - 1900460 + F 78 -3 -4.86033 | gap 1, overlap 1900458 GCGGAGACTCATCGC CGC-ACA AAAC TGTTGCG TTTTTGTAACGCTTT TERM 966 1901664 - 1901690 + G 70 -5.8 -4.25104 | overlap 1901662 CTGATCTAGTGGCAG CCGGACGCGA TCCGGCC TCGTTTCCGG TTTTCCTCCGCGCGA trd_1893 1900967 - 1902124 + | Luciferase-like monooxygenase superfamily trd_1892 1903370 - 1902096 - | putative glycosyltransferase TERM 967 1903888 - 1903925 + G 70 -11.1 -3.34629 | overlap 1903919 ATCGGCCGGGAACGC TGCTGCCGCGCTCAGCG CCTA TGCAGCGCGCGCCGGCA TTCCTGCTTTCGTCT thrC 1903469 - 1904704 + | threonine synthase mutM 1905612 - 1904743 - | formamidopyrimidine-DNA glycosylase trd_1896 1905643 - 1905990 + | Hit family protein trd_1897 1909175 - 1906071 - | BNR/Asp-box repeat domain protein TERM 968 1909157 - 1909146 - Gf 83 -5.8 -4.90778 | GGCACCGAAATAAAA GACC ATCG GGTC CTCGGGGTGCCCGGC trd_1898 1909164 - 1909292 + | hypothetical protein trd_1899 1909524 - 1909712 + | hypothetical protein trd_1900 1909722 - 1910222 + | hypothetical protein trd_1901 1910182 - 1910511 + | hypothetical protein trd_1902 1911792 - 1911037 - | hypothetical protein trd_1903 1911892 - 1912116 + | hypothetical protein trd_1904 1912113 - 1912367 + | mttA/Hcf106 family protein TERM 969 1912646 - 1912691 + F 81 -12.6 -3.90291 | gap 2, opp_overlap 1912656 1912661 TCCCGTTCGAGCGAC GCCGAGGAGACGACAGGGTGTC GACG GGCCCCCTTTCG-C-CCTCGGC TTTACTTGCCGACAT TERM 970 1913578 - 1913593 + G 75 -6.8 -4.37092 | overlap 1913583 GACACCAGATGTCGT GCGCTT CGTC GAGCGC TTTTGTGCCGACGCT trd_1905 1912751 - 1914445 + | Trypsin domain protein trd_1906 1915164 - 1914454 - | putative oxidoreductase trd_1907 1917913 - 1915220 - | developmental regulator MorA TERM 971 1915662 - 1915647 - G 70 -5.4 -4.371 | gap 1, opp_overlap 1915647, overlap 1915650 CGCAGCACAGCAAAA TGACGCG CTT CGCG-CA ATGTTCGAGCCGACA trd_1908 1919668 - 1918082 - | hypothetical protein TERM 972 1919770 - 1919795 + r 74 -13.2 -3.28712 | opp_overlap 1919752 GGCATCCGCCTCCGG CGGGCGCCCG ATCGGC CGGGCGCACG TTATGAGACGACCGC cysS 1921268 - 1920045 - | cysteinyl-tRNA synthetase trd_1910 1921344 - 1921481 + | peroxiredoxin, bacterioferritin comigratory protein homolog trd_1912 1921500 - 1921817 + | bacterioferritin comigratory protein trd_1911 1923206 - 1921800 - | pyridine nucleotide-disulphide oxidoreductase family protein trd_1914 1923384 - 1924199 + | putative oxidoreductase trd_1913 1924633 - 1924166 - | hypothetical protein trd_1915 1925214 - 1924657 - | glyoxalase family protein trd_1916 1927016 - 1925235 - | hypothetical protein TERM 973 1926520 - 1926491 - G 72 -8.6 -4.07568 | TGGGCTCGTTCAAAA GCT-CGACCGCGGC AAGC GCCGCG-CCGTAGC GCCCAACGATCTCGG trd_1917 1927961 - 1927062 - | putative haloacid dehalogenase-like hydrolase TERM 974 1927445 - 1927399 - G 80 -14.8 -3.08934 | TGATAGACGGGAAGA CCGGCGCGGGCCAGGCGGGCCG TGG CGCGCCGCAGGGCGCGCTCCGG ACCGAAAAGGTCGAT TERM 975 1927661 - 1927694 + g 80 -14.5 -3.15544 | CCAGCGCGCGAGCCA GTGCCTGCCGAGCGA GCGG TCGCTCGGCCAGCGC TTCCTCGCGCTCGGC trd_1918 1928261 - 1929076 + | putative fumarylacetoacetate hydrolase family protein trd_1919 1929073 - 1929423 + | hypothetical protein trd_1920 1931148 - 1929787 - | hypothetical protein trd_1921 1931185 - 1931403 + | hypothetical protein trd_1922 1931740 - 1933572 + | putative cadherin domain/calx-beta domain protein TERM 976 1933793 - 1933750 - T 71 -9.5 -3.70902 | gap 1, opp_overlap 1933792, overlap 1933755 CGGCCGAGATCGAAA GCACAGAAGCG-GCGCCGGT TCGCT ACCGGCGAGCGCTCCCTCGC TGGACCGGTCCATCT TERM 977 1933911 - 1933949 + T 72 -8.7 -4.08767 | GGGTACCGCTCCGAT CCCGCTCCTCGGTCGCT CGGCC GGCGGTCTGGGAGCTGG TTTTGCCCGCATCAC trd_1923 1934462 - 1934040 - | methylmalonyl-CoA epimerase trd_1924 1934835 - 1934545 - | cell division inhibitor MinE minD 1935679 - 1934855 - | septum site-determining protein MinD minC 1936416 - 1935709 - | septum site-determining protein MinC TERM 978 1936043 - 1936055 + g 70 -5.5 -4.23213 | CGGAGATAGGTCGCG CTTCC ATC GGGAG TTTGTTCGCTGTCCG trd_1927 1938696 - 1936420 - | penicillin-binding protein TERM 979 1937557 - 1937577 + g 79 -6.8 -4.56597 | CACGATGGCCACGCC GGACCCGA CCGGA TCGCGTCC TTTTTCGCGGGCAGC TERM 980 1938207 - 1938195 - G 81 -3.3 -5.00616 | overlap 1938196 1938198 TGGGGGCGGAAAAAA CCAGC CCT GCCAG GTCAGCTCCGGGCAC trd_1928 1939174 - 1938686 - | hypothetical protein trd_1929 1939978 - 1939223 - | probable phosphoesterase TERM 981 1940501 - 1940525 + G 77 -4.8 -4.60487 | opp_overlap 1940481 1940482, overlap 1940505 GGAGTCGATCGCCAG CGCGGCGACC GACCA GGACGCTTCG TTTTTCCGCGTCGTC trd_1930 1940094 - 1942091 + | possible glycanase or glycogenase with amylase domain TERM 982 1942692 - 1942713 + G 71 -13.7 -2.71325 | opp_overlap 1942683, overlap 1942691 1942692 GACAATCCGGCGGTC CGACGCGCG ATCC TGCGCGTCG TCGATTTCTGGATGC trd_1931 1942101 - 1945472 + | alpha amylase, catalytic subdomain TERM 983 1947346 - 1947328 - g 70 -11.6 -3.31144 | GCGGGAGCCGCAGAA CCGCCCCG GAA CGGGGCTG GAAATGCCGAACTGG treY 1945469 - 1947463 + | putative fusion of 4-alpha glucanotransferase and maltooligosyltrehalose synthase TERM 984 1948237 - 1948254 + G 74 -11.3 -3.61398 | TCCCACTTTCCCACT GACGAGC ACGG GCTCGTC TTCTTCGACGGGACC glgB 1947460 - 1949403 + | 1,4-alpha-glucan branching enzyme trd_1935 1949400 - 1951844 + | glycosyl hydrolase, family 57 trd_1934 1952595 - 1951831 - | putative cobyric acid synthase TERM 985 1952448 - 1952436 - G 82 -5.5 -4.77165 | overlap 1952439 CGCCCCAGAAGAAAA GATCG CAG CGACC CGGCTCGAGCGGATC trd_1936 1953986 - 1952607 - | hypothetical tripeptide synthase involved in murein formation TERM 986 1953329 - 1953311 - G 84 -6.7 -4.83615 | gap 1, overlap 1953312 GATGGCCGAGAAAAA CCTGCTCG TACG CGAGC-GG AGCACCGCACCGCGG trd_1937 1954814 - 1953996 - | rod shape-determining protein trd_1938 1955903 - 1954827 - | Rod shape-determining protein mreB trd_1939 1957557 - 1955929 - | lipoprotein precursor trd_1940 1957789 - 1958787 + | conserved hypothetical protein TIGR00147 trd_1941 1958820 - 1960034 + | hypothetical protein trd_1942 1961340 - 1960099 - | probable alcohol dehydrogenase TERM 987 1960997 - 1960979 - G 72 -8.8 -4.07885 | overlap 1960933 1960980 CATGGTTCCCGAAAA CCGCGTGC GGC ACACGCGA GCAGCGGGTTGACCG trd_1943 1962979 - 1961351 - | N-acyl-D-aspartate deacylase trd_1944 1963804 - 1963055 - | domain of unknown function protein trd_1945 1965027 - 1963834 - | Mandelate racemase / muconate lactonizing enzyme, N-terminal domain protein trd_1946 1966039 - 1965158 - | Senescence marker protein-30 (SMP-30) trd_1947 1966135 - 1966383 + | hypothetical protein TERM 988 1967084 - 1967053 - g 100 -19.6 -3.38768 | gap 1, opp_overlap 1967051 1967047 GGATACGATGGAGAA GCTCGGCTATCGTCC CGA GGACGAT-GCCGAGC GCTACTTCATCGAGT trd_1948 1966385 - 1967101 + | putative oxidoreductase protein trd_1949 1967393 - 1967256 - | hypothetical protein trd_1950 1969000 - 1968161 - | maltose ABC transporter, permease TERM 989 1968252 - 1968235 - G 70 -6.3 -4.26344 | AGAGGCTGACGAAAA TCGCGAT GATG ATCACGA TGGGTGGCAAAAACC trd_1951 1970015 - 1969011 - | oligopeptide ABC transporter, permease protein TERM 990 1969635 - 1969603 - G 74 -10.6 -3.75933 | gap 1, overlap 1969604 1969625 AGATACTGGACGAAA CGG-GGACTCCTGGG CCAA CCCAGGAGTGCACCA AGAATAGTGCCCACC TERM 991 1970114 - 1970058 - RH 75 -8 -4.32067 | gap 2, opp_overlap 1970058 1970106 TACCTCAGAAAACAA TTGGACACCGCGCTGGGCAGCAAGCCGC GCA GCTGCTCG-TCCTCAGCGCGATG-CGAA ATCGTCTCATTGTGT trd_1952 1971965 - 1970121 - | Bacterial extracellular solute-binding proteins, family 5 TERM 992 1971238 - 1971218 - GH 72 -3.1 -4.66537 | overlap 1971221 1971222 CCGGCGAAGAGAAAA CGACCCGCC ACG GACTGGTGG TGACTGGCCAGCCGC trd_1954 1971853 - 1973100 + | putative oligopeptide transport atp-binding abc transporter protein TERM 993 1973172 - 1973212 + G 70 -5.4 -4.40572 | gap 1, overlap 1973168 1973206 AGTCAGGTGGTCGCG CTCGAGGACTTCTCGATCG CCTT CGAT-GAGGCTTCCCCGAG TTTTATCGCGGTTGT trd_1955 1973097 - 1974140 + | oligopeptide transport ATP-binding protein appF trd_1956 1975326 - 1974154 - | 2-oxo-3-deoxygalactonate 6-phosphate aldolase and galactonate dehydratase trd_1957 1975415 - 1976677 + | mandelate racemase/muconate lactonizing enzyme:Mandelate racemase/muconate lactonizing enzyme dgoA 1978215 - 1977016 - | probable galactonate dehydratase protein TERM 994 1977700 - 1977683 - G 75 -7.7 -4.30576 | GCTTCAGGATCAAAA GGCCATA TTTT CATGGCC CGAATCCCCATCGCA trd_1959 1979712 - 1978315 - | putative lipoprotein TERM 995 1979042 - 1979024 - G 76 -9.5 -4.07687 | opp_overlap 1979026 ACTGCTGTTCCAAAA GCCCACG GACTG CGCGGGC AGTTCGGGCTTCCCT TERM 996 1979715 - 1979705 - G 72 -8.2 -3.95148 | overlap 1979706 AGACAGCCAAGGAAA CGCG CCA CGCG GTACTGCTCCCCCGT trd_1960 1980891 - 1979776 - | ErfK/YbiS/YcfS/YnhG family protein trd_1961 1981612 - 1981247 - | putative peptidase trd_1962 1981857 - 1981615 - | hypothetical protein trd_1963 1982735 - 1981854 - | ComE operon protein 3 pgsA 1983322 - 1982741 - | CDP-diacylglycerol--glycerol-3-phosphate 3 -phosphatidyltransferase (pgsA) trd_1965 1984516 - 1983329 - | glycosyl transferase trd_1966 1984550 - 1984714 + | hypothetical protein trd_1967 1985227 - 1984721 - | PRC-barrel domain protein TERM 997 1985793 - 1985773 - g 70 -5.3 -4.4261 | overlap 1985785 CCGGCAACAGCAAAA CGATCCGAC CAA GCCGCACCG GGCGTGGATCATCGA trd_1968 1985366 - 1987894 + | putative penicillin-binding protein 1A trd_1969 1988080 - 1987967 - | hypothetical protein trd_1970 1988228 - 1988031 - | hypothetical protein TERM 998 1988093 - 1988074 - G 71 -7.8 -4.11394 | opp_overlap 1988083 ACCGGACTCGGAAAA CGCTCACC TGAC GCTGAGCG GCCATCGTCTCCTTC trd_1971 1988306 - 1989451 + | putative amino acid oxidase trd_1972 1990531 - 1989527 - | Polysulphide reductase, NrfD superfamily trd_1973 1991372 - 1990524 - | putative [Ni/Fe] hydrogenase, iron-sulfur cluster-binding subunit trd_1974 1994551 - 1991369 - | formate dehydrogenase, nitrate-inducible, major subunit (selenocysteine-containing) TERM 999 1992749 - 1992770 + gr 79 -10.8 -4.07568 | overlap 1992750 GTCCAGATTGGCCAG TGCGCGGC GGGCCA GCCGCGCG TTTTGCCCGCCAACG trd_1975 1995252 - 1994455 - | hypothetical protein trd_1976 1995650 - 1995225 - | UspA kefB 1996862 - 1995654 - | Kef-type K+ transport systems, membrane components TERM 1000 1996950 - 1996922 - H 100 -16.8 -5.18726 | GGGGCAGAAGAAAAA CTCCTGCCCGCA CGTCC TGCGAGCAGGAG CCATCAGCCTTCTCT trd_1978 1997198 - 1997593 + | putative HEPN domain TERM 1001 1997829 - 1997869 + G 78 -16.2 -2.78384 | gap 1, opp_overlap 1997829 1997830 TGGAGCGAAGCAGAA GTGGCAGCGAGTGCCGCGA GCGG TCGCGGC-CTGGCTGCCAA TGTGCTCCCGCGAGC TERM 1002 1997869 - 1997829 - g 90 -16.2 -3.52652 | gap 1, opp_overlap 1997829, overlap 1997830 TGGAGCGAAGCAGAA GTGGCAGCGAGTGCCGCGA GCGG TCGCGGC-CTGGCTGCCAA TGTGCTCCCGCGAGC TERM 1003 1997868 - 1997830 - g 90 -19.7 -2.7127 | gap 1, opp_overlap 1997829, overlap 1997829 GGAGCGAAGCAGAAG TGGCAGCGAGTGCCGCGA GCGG TCGCGGC-CTGGCTGCCA ATGTGCTCCCGCGAG trd_1979 1997574 - 1997900 + | putative Nucleotidyltransferase domain trd_1980 1999757 - 1997931 - | putative endonuclease/exonuclease/phosphatase family protein TERM 1004 1999878 - 1999865 - H 75 -3.1 -4.82819 | gap 1 CAGACTAGAAGAAAA TGC-CG GAA CGAGCA AGGAGCGATCGGCCC trd_1981 2000576 - 2001403 + | hypothetical protein trd_1982 2001433 - 2002299 + | mechanosensitive ion channel SEQUENCE gi|221635406|ref|NC_011961.1| Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence (length 917738) trd_A0001 437 - 2458 + | hypothetical protein trd_A0003 2517 - 2813 + | expressed protein trd_A0002 4261 - 2789 - | probable methylmalonate-semialdehyde dehydrogenase [acylating] (mmsdh) TERM 1 2838 - 2815 - G 78 -3.8 -4.75288 | overlap 2816 2837 GCAGATCAAAATAAA TGGTCTTCAC TTGC GTGAAGAACT CGAGCGCTGCCCGAC trd_A0004 5721 - 4258 - | hypothetical protein trd_A0005 5921 - 5796 - | hypothetical protein trd_A0006 7323 - 5959 - | major facilitator superfamily MFS_1 TERM 2 6461 - 6446 - G 72 -6.8 -4.23529 | gap 1, overlap 6442 AGAGCAAGATAGAAA CCGACCG TTT CGG-CGG GAAGGCCGAGCACGC TERM 3 7824 - 7856 + G 86 -3.4 -5.14563 | gap 1, overlap 7828 AGAGCCGGAAAGGTC GCGAG-CTGGCCG AAAACCCC CGGGCAGCCTTGC TTTTTTACTGGGAAC pdxH 7559 - 8212 + | pyridoxamine 5'-phosphate oxidase trd_A0008 8222 - 8641 + | protein hit trd_A0009 9038 - 9607 + | isochorismatase (2,3 dihydro-2,3 dihydroxybenzoatesynthase) (Superoxide-inducible protein 1) (SOI1) trd_A0010 10329 - 10006 - | hypothetical protein trd_A0011 10328 - 11623 + | beta-lactamase trd_A0012 12526 - 11747 - | 3-oxoacyl-[acyl-carrier-protein] reductase (3-ketoacyl-acyl carrier protein reductase) TERM 4 11838 - 11824 - GfH 70 -5.6 -4.30978 | overlap 11825 CGGAAGCGAGGAAAA CGACCG CCG CGGCCA CTTCCTCGGGCAGAC trd_A0013 12483 - 12602 + | hypothetical protein TERM 5 12619 - 12640 + Tr 74 -2.2 -4.84359 | GGGCGATCAGCGAAG CGCGAGAG GCGAAA CTGTTGCG TTTTTGTAACACTCC trd_A0014 13826 - 12942 - | 3-hydroxyisobutyrate dehydrogenase family protein trd_A0015 14613 - 13981 - | NADH dehydrogenase (h(2)o(2)-forming nadh oxidase)(nadh:oxygen oxidoreductase) trd_A0016 14940 - 14671 - | LytR/CspA/Psr family protein TERM 6 14817 - 14777 - G 82 -6.7 -4.67353 | gap 1, overlap 14778 CCATCCACGGAAAAA GCGCGCACGGTCGGCCAC TGTGCG GCGGCCGAGGG-GCGCGT GGAAACCGAAAGCAT trd_A0017 16476 - 14959 - | putative Mg chelatase homolog trd_A0018 16890 - 16516 - | DNA polymerase, beta domain protein region trd_A0019 17257 - 16856 - | hepn domain protein trd_A0020 17660 - 18109 + | heat shock protein, class I trd_A0021 18141 - 18812 + | osmotically inducible protein Y domain protein TERM 7 18832 - 18859 + F 100 -19.8 -3.75024 | opp_overlap 18832 AGTCCAGCGAGTACA CGGGCCCCGGGG GCAG CCCAGGGGCCCG TTCTTCCTGGTCACG TERM 8 18859 - 18832 - f 100 -19.8 -2.80935 | opp_overlap 18832 AGTCCAGCGAGTACA CGGGCCCCGGGG GCAG CCCAGGGGCCCG TTCTTCCTGGTCACG trd_A0022 19223 - 19426 + | hypothetical protein trd_A0023 19470 - 20807 + | basic membrane protein, putative TERM 9 20829 - 20885 + F 74 -11.4 -3.62348 | gap 1, opp_overlap 20850, overlap 20841 20883 GAGACGGAAGGATGC GTCGACGGGCGAGAGTC-GAAAGGCGT GGGC GCGCTGAGCCGACCCTCGCCCGTCGCC TGTTTCTGTAGGCTT TERM 10 22188 - 22200 + G 76 -6.2 -4.48741 | TGGGGCGGGTTCTCT CGCG CCGGC CGCG TTTTCTCATCGCTTG trd_A0024 20921 - 22456 + | ribose ABC transporter, ATP-binding protein trd_A0025 22453 - 23625 + | inner-membrane translocator TERM 11 24085 - 24067 - g 72 -8.8 -4.07568 | CTCGGTCGGTGAAAA TCCCTCCG TCG CGGAGGCA TCGGGCATCTCCGTC TERM 12 24088 - 24112 + G 73 -12.1 -3.34398 | overlap 24086 CGTCGCGGAGGCATC GGGCATCTCCG TCA CGGGGATGCGC TATTTGGCAGCCGCG TERM 13 24270 - 24281 + G 70 -2.2 -4.64676 | ACCCGTTCCTGGTCG TCGT CGGC GCGA TTTTCTTCGGGATCC trd_A0026 23603 - 24481 + | ABC-type transport system, permease component TERM 14 24506 - 24534 + T 100 -12.4 -4.58283 | gap 1 CTTCGGTCCGAGCGG GGCGGGCGA-GCG CGTA CGAATCGCCCGCC TTTTTGCGCCGATTC trd_A0027 25288 - 24608 - | hypothetical protein trd_A0028 25671 - 25285 - | flagellar motor switch phosphatase FliY (CheY-Pphosphatase fliY) (Flagellar motor switch protein fliY) trd_A0029 26651 - 25647 - | flagellar motor switch protein FliM fliL 27207 - 26662 - | flagellar basal body-associated protein FliL TERM 15 26903 - 26927 + g 76 -5.7 -4.46212 | gap 1 TGACCGCCGCCTCCG CCTGCG-GCG GTGAGA CGCTCGTAGG TTTTCTGGTCGACGG trd_A0031 27936 - 27223 - | chemotaxis protein MotB (Motility protein B) trd_A0032 28746 - 27943 - | chemotaxis protein PomA trd_A0033 28998 - 28768 - | flagellar FlbD family protein TERM 16 29746 - 29763 + G 72 -12.7 -3.15544 | opp_overlap 29743 29741 TTCCGACAGACACGG GAGCGCG ACAT CGCGCTC TTCATGAGCCTCGGC fliP 29242 - 30057 + | flagellar biosynthetic protein FliP fliQ 30068 - 30337 + | flagellar biosynthetic protein FliQ fliR 30347 - 31129 + | flagellar biosynthetic protein FliR flhB 31133 - 32224 + | flagellar biosynthetic protein FlhB TERM 17 32980 - 32992 + G 73 -9.1 -3.83205 | CCTACGCCCTGCTGA CCGTC GGG GACGG TTTGGTCTCGCAGAT flhA 32244 - 34319 + | flagellar biosynthesis protein FlhA trd_A0039 34323 - 35324 + | GTP-binding signal recognition particle SRP54, G-domain trd_A0040 35486 - 35728 + | hypothetical protein trd_A0041 35746 - 36534 + | RNA polymerase sigma-D factor (Sigma-28) trd_A0042 36546 - 36914 + | putative transmembrane sensory transduction histidine kinase for metal resistance trd_A0043 36919 - 37620 + | hypothetical protein TERM 18 38192 - 38209 + G 75 -6.9 -4.3739 | opp_overlap 38194, overlap 38194 AGCCCCCTCTGAGAC CACTGGC GTCA GCCAGGG TTTTCTAGAAGCCTC trd_A0044 37617 - 38363 + | flagellar basal-body rod protein FlgF (Putative proximal rod protein) trd_A0045 38375 - 39154 + | flagellar basal-body rod protein FlgG trd_A0046 39269 - 39580 + | histone demethylase jarid1c (jumonji/arid domain-containing protein 1c) (protein smcx) (protein ) trd_A0047 39596 - 39991 + | hypothetical protein flgK 40061 - 41467 + | flagellar hook-associated protein FlgK flgL 41496 - 42371 + | flagellar hook-associated protein 3 trd_A0050 42392 - 42820 + | flagellar assembly factor FliW csrA 42833 - 43072 + | carbon storage regulator trd_A0052 43122 - 43247 + | hypothetical protein trd_A0053 43482 - 44153 + | hypothetical protein trd_A0054 44720 - 44232 - | NADH pyrophosphatase TERM 19 44604 - 44567 - G 89 -16.4 -3.29144 | overlap 44568 CGATCTCGCGGAGAA CGGCCTGGTCGAGC GTCTCACCGG GCTCGACCAGGCCA CCGGGAAAGAGATAG TERM 20 44603 - 44568 - G 83 -17.7 -2.57344 | overlap 44567 GATCTCGCGGAGAAC GGCCTGGTCGAGC GTCTCACCGG GCTCGACCAGGCC ACCGGGAAAGAGATA trd_A0055 45328 - 44909 - | hypothetical protein trd_A0056 45469 - 46047 + | formate dehydrogenase-O, major subunit trd_A0057 46174 - 48654 + | formate dehydrogenase, nitrate-inducible, major subunit (Formate dehydrogenase-N subunit alpha) (FDH-N subunit alpha)(Anaerobic formate dehydrogenase major subunit) TERM 21 48707 - 48666 - f 100 -21.7 -2.52896 | opp_overlap 48669 GTAGTGGGGAACGGA GGAGTCCCCAGGGTGACTC GGCT GAGTCACCCTGGGGAGTTC CCTGAGGGAGACGAG TERM 22 48669 - 48704 + F 100 -22 -3.05384 | opp_overlap 48666 GTGGGGAACGGAGGA GTCCCCAGGGTGACTC GGCT GAGTCACCCTGGGGAG TTCCCTGAGGGAGAC trd_A0058 48725 - 49540 + | formate dehydrogenase, nitrate-inducible, iron-sulfur subunit trd_A0059 49555 - 50442 + | polysulphide reductase NrfD trd_A0060 50444 - 50692 + | hypothetical protein TERM 23 50716 - 50756 + G 86 -15.6 -3.25823 | gap 2, opp_overlap 50709 50710, overlap 50718 ATCGACAAGCTGGAG C-AGCTGGCGGAGCGAG-AC GCC GTGCTCGCTCCGCTGGCTCG TTCCTATGCCGCAAC TERM 24 50718 - 50753 + G 89 -18.4 -2.81547 | gap 1, opp_overlap 50709 50710, overlap 50716 CGACAAGCTGGAGCA GCTGGCGGAGCGAG-AC GCC GTGCTCGCTCCGCTGGC TCGTTCCTATGCCGC trd_A0061 50689 - 51561 + | formate dehydrogenase formation protein FdhE, putative trd_A0062 51571 - 51927 + | type III secretion fhipep protein, putative trd_A0063 53624 - 52101 - | permease trd_A0064 54016 - 53576 - | hypothetical protein TERM 25 54289 - 54251 - H 80 -15.2 -3.09648 | CAAGAGAGGCGAAGA GGGGCGGCGGTGCAGC TGGAGTC GCCGCACCGCCGCATC AGCGATGAAGCGCCG trd_A0065 54260 - 54406 + | hypothetical protein trd_A0066 54792 - 54490 - | HhH-GPD domain protein TERM 26 54872 - 54856 - R 81 -7.3 -4.49311 | overlap 54857 54869 AGCAGCACGAGAAAA CCGCTAT CAG ATAGCGA CCGGGCGCAGGATGC trd_A0067 55496 - 55305 - | hypothetical protein trd_A0068 56603 - 56118 - | aldehyde dehydrogenase subunit III trd_A0069 58894 - 56603 - | probable xanthine dehydrogenase subunit D (XDHasesubunit D) TERM 27 58634 - 58669 + g 77 -15.4 -2.53263 | opp_overlap 58633 58631, overlap 58627 GTCGATAGCCAACAC CGGCTGGTCTTCGATC TGGG GACCGTAGACCGGCCG TAGGTTAGGGATCCG trd_A0070 60991 - 59297 - | PEP-utilising enzyme, mobile region trd_A0071 61321 - 61025 - | antibiotic biosynthesis monooxygenase trd_A0072 62341 - 61352 - | fumarylacetoacetate hydrolase domain-containing protein 2 trd_A0073 63231 - 62338 - | 4-Hydroxybenzoyl-CoA reductase, FAD-binding subunit B TERM 28 62427 - 62412 - G 75 -6.8 -4.4078 | CGCGGGCAACGAAAA CGCGAA CCAT CTCGCG CCGATACCATGCGCT TERM 29 62915 - 62945 + g 78 -13.2 -3.53224 | AGCGTTGCTTGCTCG CGCACGCGGACGTT CGC GACATCCGCGAGCG TTTCGGCGAGCACTG trd_A0074 63841 - 63224 - | hypothetical protein trd_A0075 64828 - 63857 - | phosphoenolpyruvate synthase (Pyruvate, water dikinase)(PEP synthase) TERM 30 63910 - 63898 - G 78 -3.3 -4.91109 | overlap 63900 TCTGCAGGACAAAAA GCTCG CCG CCAGC GATGGCCCACTCGAC trd_A0076 65556 - 64834 - | cyclase family protein trd_A0077 66286 - 65573 - | transcriptional Regulator, GntR family trd_A0078 67205 - 66360 - | transcriptional regulator trd_A0079 68463 - 67225 - | domain protein trd_A0080 69210 - 68476 - | ABC-type branched-chain amino acid transport systems ATPase component trd_A0081 69982 - 69203 - | ABC transporter permease protein TERM 31 69951 - 69912 - G 100 -22.2 -3.56821 | opp_overlap 69914 ACGAGACCGCCGAAA CGGCGACTCACGCCCTGG AGTT CCAGGGCATGAGCCGCTG TGTGCGGACGGTGCA TERM 32 69914 - 69949 + g 93 -19 -2.87344 | opp_overlap 69912 GAGACCGCCGAAACG GCGACTCACGCCCTGG AGTT CCAGGGCATGAGCCGC TGTGTGCGGACGGTG trd_A0082 71413 - 69986 - | ABC-type branched-chain amino acid transport systems periplasmic component trd_A0083 72461 - 71481 - | ABC transporter ATP-binding protein trd_A0084 73327 - 72458 - | ABC transporter ATP-binding protein TERM 33 72929 - 72895 - G 86 -10.7 -4.31692 | overlap 72896 AAGCGAGCACGAAAA GCCGGTACTTGGGAT AACCG ATCCCGAGCACCGGA ATGCGTACACCACCA TERM 34 72928 - 72896 - G 78 -14.2 -3.18292 | overlap 72895 AGCGAGCACGAAAAG CCGGTACTTGGGAT AACCG ATCCCGAGCACCGG AATGCGTACACCACC trd_A0085 73455 - 73736 + | hypothetical protein TERM 35 73844 - 73857 + G 79 -3.7 -4.84761 | CCGCTGGATGGTGCC GAGCG TGCA CGCGC TTTTTATAACGGTGT TERM 36 74091 - 74103 + G 72 -6.9 -4.32177 | ATGCTGCTCCTATCC CGGGG CGA CCTCG TTTCTTCTGCCGTGA trd_A0086 73787 - 74176 + | glyoxalase/bleomycin resistance protein/dioxygenase TERM 37 74952 - 74923 - g 70 -11.5 -3.32844 | gap 1, overlap 74938 GTTCGCACCGTACAA CATCCGGGTCAACA ACG TGCTG-CCCGGACG CATCGCCACTGAACG trd_A0087 74387 - 75178 + | dehydrogenase/reductase sdr family member 4 trd_A0088 75523 - 75377 - | hypothetical protein trd_A0089 78358 - 75647 - | ABC transporter, ATP-binding protein TERM 38 78145 - 78090 - G 72 -12.7 -3.06831 | gap 3, overlap 78102 78129 GCAACCTCGAGCCAA CCGCGCACGA-CAC-CGCCGGTCTCGTG CGG CACGATACCAGCGAGCGCTCG-GCACAG GGTGGTGAGCCCGCT TERM 39 78132 - 78102 - G 73 -14 -2.79133 | overlap 78090 78129 CAACCGCGCACGACA CCGCCGGTCTCGTG CGG CACGATACCAGCGA GCGCTCGGCACAGGG trd_A0090 78977 - 78420 - | membrane spanning protein TERM 40 79893 - 79917 + G 81 -13.5 -3.65351 | CCGCGCGAACTCGCT GCTGCGCTGGG CGT CCCGGCACAGC TTTCCCTGGAGGTCG trd_A0091 79167 - 80162 + | daunorubicin resistance ATP-binding protein DrrA trd_A0092 82190 - 80919 - | major facilitator superfamily MFS_1 TERM 41 81788 - 81737 - GT 75 -15.1 -2.73994 | gap 2, overlap 81734 ACGGGGTGAAGATGA CGCTGGC-CAAGGCGCCCA-CGAGC GTGA GCACGGTGAGCGCCTGGCGCCGGCG ACGCTCGAACCACTT trd_A0093 82408 - 82151 - | hypothetical protein trd_A0094 82814 - 82374 - | domain of unknown function trd_A0095 82951 - 82811 - | hypothetical protein trd_A0096 82954 - 83196 + | hypothetical protein TERM 42 83390 - 83378 - g 87 -7.7 -4.72497 | overlap 83381 TATGCATGAACAAAA GCACT CGC AGTGC TGCCTGCGCGGAGTT trd_A0097 83368 - 85086 + | medium-chain-fatty-acid--CoA ligase (Medium-chain acyl-CoA synthetase) trd_A0098 85083 - 87296 + | probable 3-hydroxyacyl-CoA dehydrogenase trd_A0099 87323 - 88093 + | enoyl-coa hydratase, (shortchain enoyl-coa hydratase) (sceh) (enoyl-coa hydratase 1) TERM 43 88124 - 88160 + T 93 -17.4 -3.59979 | gap 1, opp_overlap 88144, overlap 88128 GGGAAGGGAAGGGGA CGCAGGCCGGCTGGG GAGAACGA CCCAGCCGGCCT-CG TTTGACATACAGGAG TERM 44 88128 - 88157 + T 88 -17.9 -2.92613 | opp_overlap 88144, overlap 88124 AGGGAAGGGGACGCA GGCCGGCTGGG GAGAACGA CCCAGCCGGCC TCGTTTGACATACAG trd_A0100 89530 - 88190 - | VanW family protein trd_A0101 89776 - 89582 - | hypothetical protein TERM 45 89749 - 89725 - G 71 -7.7 -4.08945 | opp_overlap 89725 89747 AGTACGGTGCGAAAA CCGAGAGGGCA TGG CGCGCGCTCGG TCGATGCCCGTTCGG TERM 46 90343 - 90331 - g 74 -4.8 -4.57073 | CAGCTGGTTGAAAAA GGCA GTCGA TGCC GTGCATGAGGATCCG trd_A0102 90215 - 91165 + | hypothetical protein TERM 47 93575 - 93589 + G 75 -3.4 -4.77567 | overlap 93557 93576 CCTTCGGAGCAGCTG AGGGCG TGT TGCCCA TTTTGTTCTGCGCAT trd_A0103 91162 - 94488 + | hypothetical protein TERM 48 96149 - 96165 + G 77 -5.1 -4.71426 | opp_overlap 96132, overlap 96129 CAGCCTCTTCGAGCC TGGTGGA CTT TCCAGCA TTTTCTTCCTCGACG trd_A0104 95772 - 96326 + | hypothetical protein trd_A0105 96313 - 96813 + | hypothetical protein TERM 49 98141 - 98128 - g 87 -3.8 -5.13343 | overlap 98129 98131 GAAGGCAAAAGAAAA GGAG CCGGCC CTCC GGGACGACGGGCGCG TERM 50 98268 - 98241 - g 70 -11.2 -3.41693 | TGTATCAGCAAGCAA GGGACAGGCTCG GATC CGAGGCTGACCC GCTCCTCCAGATGGT TERM 51 100147 - 100125 - g 77 -11.3 -3.72453 | overlap 100126 AGGAAGAATTGGAAA CGCGAGACC TCCGG GGTCTCGCA CAACGGGTCAGCGAG trd_A0106 96854 - 101002 + | hypothetical protein TERM 52 101198 - 101169 - g 71 -9.3 -3.76224 | gap 1 TGCCGACGCACGAAA CTG-GCGAGTGCAC GAA GTGCAACCGCTCAG GGAGGAACTTCTCAC TERM 53 101546 - 101531 - g 71 -10.4 -3.56092 | opp_overlap 101524 CTATCATCGCTGAAA GGCTGG GTCT CCAGCC GTCGGCTTTCCCCCG trd_A0107 101002 - 103182 + | PglZ domain family trd_A0108 103179 - 104627 + | hypothetical protein trd_A0109 104585 - 105778 + | cysteine desulfurase, (m-Nfs1) trd_A0110 107512 - 106181 - | crispr-associated protein, family trd_A0111 108463 - 107516 - | crispr-associated protein, Cmr6 family cmr 108878 - 108456 - | crispr-associated protein, Cmr5 family TERM 54 108716 - 108702 - G 81 -11.4 -4.0162 | CTTGGAGACCAGAAA GGCCAG CGT CTGGCC CAAGCCGTGCAGCTG cmr 109816 - 108893 - | crispr-associated ramp protein, Cmr4 family cmr 110888 - 109818 - | crispr-associated protein, Cmr3 family crm 112699 - 110885 - | crispr-associated protein, Crm2 family trd_A0116 113846 - 112692 - | crispr-associated protein, Cmr1 family, putative TERM 55 113549 - 113511 - G 78 -2.9 -4.87665 | gap 1, opp_overlap 113539, overlap 113513 113514 TGCCATGGAGAAAAA GAGGTACGCGCGGC-CGG AGTC CCGCGCTGCCCGCCACTC CTGTGGCGCGCTCTG trd_A0117 114668 - 113862 - | serine protease trd_A0118 115337 - 114678 - | hypothetical protein trd_A0119 115352 - 115468 + | hypothetical protein trd_A0120 116920 - 115580 - | peptidase domain protein TERM 56 117554 - 117523 - g 72 -8.6 -3.9749 | gap 1, overlap 117524 AGGGAGAAGAGGAAA TCGGCTCGCCG-AGC ATG GCCGCGGCGATCCGG CAGTATCGCGAGCTG trd_A0121 117048 - 118442 + | peptidase M20 trd_A0122 118641 - 118817 + | hypothetical protein TERM 57 120722 - 120682 - g 81 -13.4 -3.56142 | gap 1, opp_overlap 120682, overlap 120678 120686 TCGAGGAAGAAGGAA TCGAGCCCCGCGATGTC GTGATCCT GACACCGCGGAGC-CGA GAGCGCAGCGCTCTC TERM 58 120719 - 120686 - g 70 -13.9 -2.63501 | opp_overlap 120682, overlap 120682 120678 GGAAGAAGGAATCGA GCCCCGCGATGTC GTGATCCT GACACCGCGGAGC CGAGAGCGCAGCGCT trd_A0123 118881 - 120989 + | nerd domain protein trd_A0124 121201 - 121064 - | hypothetical protein trd_A0125 121526 - 121353 - | down syndrome critical region protein 9 TERM 59 122315 - 122279 - g 70 -14.3 -2.55668 | opp_overlap 122287, overlap 122278 TATTTGGAGAGCAAG GCCCGGGACCGAGCACC CGC GGTCTTCGGCCCCTGGC TCGAACGAGTCCGGT trd_A0126 121736 - 122689 + | hypothetical protein trd_A0127 123310 - 122972 - | virion protein US10 trd_A0128 123383 - 123766 + | hypothetical protein trd_A0129 123800 - 124210 + | hypothetical protein TERM 60 124254 - 124221 - T 100 -19.6 -3.93288 | CCTGAGCGAAGGAAA CGGTCGTGGCGCGC TCTTGC GCGAGCCACGACCG CCGATCGAAGCGCAC trd_A0130 125658 - 124279 - | VanW family protein trd_A0131 126303 - 125704 - | hypothetical protein TERM 61 126986 - 126966 - gH 77 -11.1 -3.81146 | opp_overlap 126966 CTGCCGAAGGAACAA CGCGAGGTC GTA GAGCTCGCG TACTTCGAAGGGCTC trd_A0132 126561 - 127151 + | RNA polymerase, sigma-24 subunit, ECF subfamily trd_A0133 127120 - 127863 + | hypothetical protein trd_A0134 128085 - 127972 - | hypothetical protein trd_A0135 128171 - 128287 + | hypothetical protein trd_A0136 128380 - 129120 + | putative deacetylase TERM 62 129367 - 129382 + G 70 -2.5 -4.65895 | TGCACGGGTCGCGCG CGGGA AAGTCC TCCTG TTTTTGGATGCCGAC trd_A0137 129095 - 129808 + | glycosyl transferase, family 2 TERM 63 129862 - 129821 - g 78 -13.9 -3.29144 | gap 2 TGAGGTGGTGCAGAA CGTGGCCGGGACGATCGAC ATTTCA GT-GATCATCCCGGCC-CG CAACGAAGAAGCGTT TERM 64 130069 - 130100 + G 71 -4.2 -4.56597 | opp_overlap 130064, overlap 130082 130083 130085 GAGCGAAGAACCGCG GGGCCGCAGTGGCC CAGG GGACGCTCCTGCTC TTTTTGGACGCCGAC trd_A0138 129813 - 130526 + | glycosyltransferase TERM 65 130973 - 130983 + G 79 -6.8 -4.48713 | opp_overlap 130973 CCGACCTGGTACACA CGCT TGC AGCG TTTCTTCTTCGTCGG trd_A0140 130523 - 131122 + | hypothetical membrane protein trd_A0139 131598 - 131104 - | vitamin K epoxide reductase trd_A0141 132350 - 131595 - | dsba oxidoreductase trd_A0142 132462 - 132304 - | hypothetical protein trd_A0143 132491 - 133441 + | hypothetical protein trd_A0145 133869 - 134090 + | hypothetical protein trd_A0144 136404 - 134050 - | hypothetical protein TERM 66 135712 - 135686 - G 75 -12.2 -3.44622 | CAGTGCCAGAACCAA CCGCGCCGACGA ACG TCGTCGCCGCTG CGCTCGGGCTGCTCA trd_A0146 137194 - 136922 - | hydroxyproline-rich glycoprotein family protein TERM 67 138124 - 138169 + G 81 -11.1 -4.1552 | gap 1, overlap 138118 GCCAGACTGGCTGCG TGCCGACTGCTCGCCGCGC-GC TTC GCTGCGTGACGAGTGGTTGGGA TTTCTTCGAGCGATA trd_A0147 138011 - 138394 + | hypothetical protein trd_A0148 138489 - 139259 + | hypothetical protein trd_A0149 139835 - 139314 - | hypothetical protein TERM 68 140013 - 140037 + G 71 -14.3 -2.7127 | opp_overlap 140012, overlap 140012 CCGTGGGATAGAGAG CGGGCTGTCGA TGG TCGGCAGCTCG GTTATCCTTCCGTCA trd_A0150 139983 - 141065 + | heme O oxygenase rsgA 141094 - 142083 + | ribosome small subunit-dependent GTPase A trd_A0152 142080 - 142559 + | hypothetical protein TERM 69 142809 - 142783 - T 100 -20.2 -5.40072 | opp_overlap 142785 TGGCGCTGAAAAAAA GAGCGGGACGGA ATA CCCGTCCCGCTC TCGTGGACTCGCTCA TERM 70 142785 - 142807 + T 84 -16.3 -2.79915 | opp_overlap 142783 GCGCTGAAAAAAAGA GCGGGACGG AATAC CCGTCCCGC TCTCGTGGACTCGCT trd_A0153 143601 - 142822 - | transcriptional regulator, GntR family trd_A0154 143988 - 143695 - | hypothetical protein trd_A0155 146300 - 143988 - | two-component response regulator alr 147674 - 146373 - | alanine racemase TERM 71 147130 - 147110 - G 87 -14.7 -3.59946 | CTTCGAAGGAGAGAA GCGGGTCGG ATG CCAACCCGC GGGCCAGCGCGACTG TERM 72 147731 - 147746 + H 72 -9 -4.08767 | opp_overlap 147733, overlap 147729 CAGCGGGTGGGGAGA GACGAG AGCG CTCGTC TTTTCCGAACGTCGG trd_A0157 147821 - 148009 + | hypothetical protein trd_A0159 149491 - 149616 + | hypothetical protein trd_A0158 151214 - 149598 - | acetolactate synthase TERM 73 150543 - 150573 + g 71 -8 -4.07568 | overlap 150555 GACCGGGAGATGCCA CGCGGCCAGCCAGC GCC GCAGGCCCGGCGCG TTTTCCGGCCGCACG trd_A0161 151281 - 151418 + | hypothetical protein trd_A0160 151845 - 151378 - | hypothetical protein trd_A0162 151961 - 153001 + | proline racemase trd_A0163 153271 - 153098 - | hypothetical protein TERM 74 153664 - 153689 + H 100 -17.6 -4.54727 | TACCGCGAGACGGCA CCGCTCGCCC CCGCCA GGGCGAGCGG TTTTCGTTTGCGAGG trd_A0164 153718 - 153957 + | hypothetical protein lysX 154013 - 154894 + | lysine biosynthesis enzyme LysX trd_A0166 155152 - 155589 + | hypothetical protein trd_A0167 155586 - 155726 + | hypothetical protein trd_A0168 156726 - 156550 - | hypothetical protein trd_A0169 156700 - 157626 + | hypothetical protein trd_A0170 158489 - 157746 - | putative integral membrane protein trd_A0171 159413 - 158493 - | Nod factor export ATP-binding protein I (Nodulation ATP-binding protein I) trd_A0172 159766 - 159410 - | transcriptional regulator trd_A0173 160319 - 159753 - | hypothetical protein TERM 75 160348 - 160380 + r 93 -18.7 -3.34104 | overlap 160327 160350 TCGGTGCCGAGCATC TGCGGAGTACTTTGT TAT ACAAAGTACTCCGTA TTCGTGTCGTTGTCA TERM 76 160350 - 160378 + r 100 -19.1 -3.2326 | overlap 160327 160348 GGTGCCGAGCATCTG CGGAGTACTTTGT TAT ACAAAGTACTCCG TATTCGTGTCGTTGT trd_A0174 161196 - 160393 - | hypothetical protein trd_A0175 161324 - 161758 + | citrate synthase 3 (Citrate synthase III) prpD 161784 - 163229 + | 2-methylcitrate dehydratase TERM 77 163718 - 163667 - g 100 -15.3 -4.26076 | gap 3 GGAGCTGGAGCAAAA GGTGCGGGCGATCAAG--GCGGT-GG CTC CCGACCTCTACGTGATCGCCCGCACC GATGCCTACGAGCAG prpB 163233 - 164156 + | methylisocitrate lyase trd_A0178 164153 - 164455 + | hypothetical protein trd_A0179 164513 - 164803 + | beta-N-acetylhexosaminidase, putative trd_A0180 164800 - 165165 + | hypothetical protein trd_A0181 165963 - 165268 - | PRC-barrel domain protein trd_A0182 166056 - 166556 + | ferric uptake regulator, Fur family trd_A0183 166712 - 167683 + | periplasmic solute binding protein trd_A0184 167683 - 168507 + | manganese transport system ATP-binding protein MntA trd_A0185 168491 - 169348 + | manganese transport system membrane protein MntB trd_A0186 169598 - 169473 - | hypothetical protein TERM 78 169709 - 169684 - g 90 -16.9 -3.35798 | overlap 169698 AGCGGCGAGCTACAA GCTGGGGCAGA TGAT CCTGCCCCAGC TCGAGGCGGGGACGC trd_A0187 169637 - 170041 + | hypothetical protein trd_A0188 170516 - 170121 - | hypothetical protein trd_A0189 170515 - 170784 + | hypothetical protein TERM 79 171672 - 171712 + Tr 75 -12.3 -3.53733 | overlap 171662 171661 171671 GAAGGCGCGAGCAGC CGGGGGCTGCTCCGGGTGT TCG GCTCCTGTCGCTGCCCCCG TGTTTCTGGCCTAGC trd_A0190 172175 - 171723 - | hypothetical protein trd_A0191 172999 - 172172 - | ABC-2 type transporter superfamily trd_A0192 175340 - 172989 - | nitrous oxidase accessory protein NosD trd_A0193 175980 - 175345 - | C553-type monoheme cytochrome c trd_A0194 178183 - 176069 - | nitrous-oxide reductase (N(2)OR) (N2Oreductase) TERM 80 177943 - 177957 + g 76 -5.6 -4.57581 | overlap 177938 177945 TCTCGTCGGCGCTCG CCCCCA GCT TGGGTG TTTCTTCTTTGCGCT trd_A0195 179482 - 178229 - | hypothetical protein TERM 81 178771 - 178748 - G 71 -13.1 -2.96711 | overlap 178740 CCTACAAGGCAGACA GCGCACCGC CGAACC GCGGCGCGC ATGGGCCCTGCTGGG TERM 82 179071 - 179055 - G 80 -15.1 -3.05384 | CGCTGCCGCACCCAA CCGCGCC ACA GGCGCGG CAAACACGGTGGCAC TERM 83 179608 - 179622 + G 72 -8.5 -3.94746 | GCGGATCGTCGCCTG CGCGG CCTGC CCGCG TTTGGTTGCCTATCG TERM 84 179707 - 179695 - g 71 -10.5 -3.56092 | GGACTATTGGGGAAA GCCGG TTC CCGGC TTCGGCGATCCGCAG trd_A0197 179555 - 180310 + | uracil-DNA glycosylase superfamily trd_A0196 180852 - 180289 - | hypothetical protein trd_A0198 180820 - 181542 + | hypothetical protein trd_A0199 181549 - 181716 + | hypothetical protein TERM 85 181888 - 181849 - T 100 -17.9 -4.58395 | gap 1 GGTATCCCCGAAAAA CACCCCGCCGC-CCCGAT CGTGC AACGGGAGCAGCGGGGTG CGGTCGCAAGTCGCT trd_A0200 183282 - 181915 - | hypothetical protein trd_A0201 184425 - 183439 - | zinc transporter ZitB trd_A0202 186673 - 184412 - | iron-sulfur cluster binding protein trd_A0203 186834 - 186947 + | hypothetical protein trd_A0204 186988 - 187119 + | hypothetical protein TERM 86 187430 - 187488 + F 100 -23.9 -3.58343 | gap 2 TCGGCCACGCGGAAT CGCCGCGCCACCGGCGCGGCGGGCGAGGC GCC GCCTCGCCC-CTGCGC-GGTGAGGTGGTG TTTCGGCGTCGTGCC trd_A0205 187819 - 189423 + | transcriptional regulator, CdaR family trd_A0206 189765 - 189571 - | hypothetical protein TERM 87 189797 - 189813 + r 75 -15.1 -2.70932 | GCGGTGCCTGACCCG CCGGCCC AGA GGGCCGG TCATTGCGGCGGGAG trd_A0207 190781 - 190089 - | type IV pilus assembly protein PilZ TERM 88 191687 - 191673 - H 72 -7 -4.29907 | overlap 191667 191676 AGAGGAGAACAGAAA GGAGGC CCT GCCGCC GGGCGAGGCGGCGCG trd_A0208 191803 - 193011 + | flagellin TERM 89 193022 - 193064 + F 89 -18.4 -3.14132 | gap 1 GCTAGTCCGAAGCGT AGC-CGCGCCCCGGTCGGG CAGCCA CCCGACCGGGGCGCTCGCG TTCGTGGGGCAGCGG trd_A0209 193192 - 193731 + | hypothetical protein trd_A0210 194755 - 196728 + | chemotaxis response regulator protein-glutamate methylesterase ofgroup 3 operon trd_A0211 196765 - 197145 + | transcriptional regulatory protein ResD trd_A0212 197174 - 197686 + | hypothetical protein trd_A0213 197706 - 198455 + | hypothetical protein TERM 90 198474 - 198500 + F 100 -19.5 -4.371 | GGCGGCGGAGGTCAG CAGGGCGTGGG AACTC CCCACGCCCTG TTTTGCTGTGGTCAG trd_A0214 199628 - 201718 + | methyl-accepting chemotaxis protein TERM 91 202425 - 202400 - g 71 -3.9 -4.58395 | gap 1, opp_overlap 202381, overlap 202402 CGGAGCTTCCAAAAA GC-TCTCGGTGA TGG TCTCCGAGCTGC AGGATATCGCCGCTC trd_A0215 201699 - 204797 + | CheA signal transduction histidine kinase TERM 92 204817 - 204857 + F 100 -27.7 -3.64703 | opp_overlap 204801 GGGCGCGGGCGTGCC GGGACTGGCTCGGCTGGGG CGA TCCCGGCCGAGCCAGTCTC TTTGACTGGCCGGCG TERM 93 205058 - 205074 + F 73 -12.3 -3.4072 | GCCAACGCGTCATAC TCCGCTG CGT CAGCGGA TTCTGGTGAAGACTG trd_A0216 205135 - 205347 + | hypothetical protein trd_A0217 205377 - 207350 + | methyl-accepting chemotaxis protein, putative trd_A0218 207465 - 207617 + | hypothetical protein trd_A0219 207664 - 208026 + | hypothetical protein TERM 94 208727 - 208768 + G 76 -13.7 -3.17075 | gap 1 CACGCAGCGGTGATA CCGTCGTCGGGACGCGCAGT TTG ACCGC-CGTCAAGACGACGG TTCCCTTGAGCCAGG trd_A0220 208072 - 210048 + | flagellar hook-associated 2 domain protein, putative fliS 210073 - 210480 + | flagellar protein FliS trd_A0222 210494 - 210859 + | tripartite motif-containing protein 56 trd_A0223 210863 - 211531 + | peptidase C60, sortase A and B TERM 95 211858 - 211903 + T 83 -14.7 -3.2964 | gap 1 ATAGGGGCGACGCGC TGTGTCGCCAGCCGGGTCACCG GCG CGGCGACCTGGGTGGCAAC-CA TTCTCACAGCCATTT trd_A0224 213705 - 212911 - | hypothetical protein trd_A0225 214555 - 213722 - | hypothetical protein TERM 96 214156 - 214139 - G 70 -5.5 -4.30995 | overlap 214136 TTCTTCATAAAAGAA GTTCCAG CCAC CGGGAAC CGCTAGGCGCACCTG TERM 97 214646 - 214664 + H 79 -10.2 -4.07568 | opp_overlap 214647 214649, overlap 214647 214649 ACCAGCGCACCGAAG AGAGGGCG TCT CGCCCTCA TTTTCGGCCCGAGCA TERM 98 214663 - 214647 - H 76 -13.7 -3.09327 | opp_overlap 214647 214646 214649, overlap 214649 CCAGCGCACCGAAGA GAGGGCG TCT CGCCCTC ATTTTCGGCCCGAGC TERM 99 214647 - 214663 + H 76 -13.7 -3.04398 | opp_overlap 214647 214649, overlap 214646 214649 CCAGCGCACCGAAGA GAGGGCG TCT CGCCCTC ATTTTCGGCCCGAGC trd_A0226 215553 - 215729 + | hypothetical protein trd_A0227 215770 - 216009 + | hypothetical protein trd_A0228 216088 - 217638 + | copper resistance protein A TERM 100 217674 - 217645 - T 90 -16.4 -3.41602 | opp_overlap 217637 217636, overlap 217647 GTCACCTGAGTAGAA CAGCCGGCGCGG AGGATA CCGCGCCGGCTC CCGCTCGTTCCTCCT TERM 101 217672 - 217647 - T 100 -19 -3.27951 | opp_overlap 217637 217636, overlap 217645 CACCTGAGTAGAACA GCCGGCGCGG AGGATA CCGCGCCGGC TCCCGCTCGTTCCTC trd_A0229 218556 - 217732 - | D-beta-hydroxybutyrate dehydrogenase (bdh) (3-hydroxybutyrate dehydrogenase) (3-hbdh) trd_A0230 219423 - 218608 - | 3-oxoacyl-[acyl-carrier-protein] reductase (3-ketoacyl-acyl carrier protein reductase) trd_A0231 220036 - 219485 - | hypothetical protein trd_A0232 220132 - 220272 + | hypothetical protein trd_A0233 220371 - 221891 + | transcriptional Regulator of molybdate metabolism, XRE family modA 221916 - 222794 + | molybdate ABC transporter, periplasmic molybdate-binding protein modB 222791 - 223642 + | molybdate ABC transporter, permease protein trd_A0236 223654 - 224463 + | hypothetical protein TERM 102 224960 - 224942 - f 71 -13.8 -2.73483 | ACGCCAGGGGAATCA GCCGCGCC GCA AGCGCGGC GGGCGAGGCAGCGCC trd_A0237 225753 - 226343 + | hypothetical protein trd_A0238 227358 - 226432 - | UspA domain protein TERM 103 226935 - 226957 + g 71 -13.4 -3.02144 | opp_overlap 226919 GTTCCGTCGCACGCA GGACGAGCGT GGG ACGCTCGGCC TGTTGGAGGACCTGC trd_A0239 228644 - 227355 - | mn2+/fe2+ transporter, nramp family TERM 104 227856 - 227820 - G 71 -9.4 -3.72576 | overlap 227821 TCCGCGGGCATGAAA GGTCGAAGCTGCCATG ATGAG CATGGCAGCATTGACG AGCCCAGCGATGCCC trd_A0240 228708 - 228824 + | hypothetical protein trd_A0241 229225 - 229608 + | hepn domain protein TERM 105 229972 - 229938 - g 100 -29.4 -3.14211 | ACCGGCTGGCAGGAA GCGGCCCGGAGGAAGC GTT GCCTCCTCCGGGCCGC GCTGATCAACGGACC trd_A0243 229619 - 230002 + | DNA polymerase beta domain protein region trd_A0242 231054 - 229978 - | alkaline phosphatase (apase) trd_A0244 231142 - 231432 + | hypothetical protein trd_A0245 231886 - 231455 - | ppox class probable f420-dependent enzyme, family TERM 106 231656 - 231684 + g 80 -12.4 -3.7948 | gap 1 CCAGTCTTCGTCGTA CCGGTCGACGACG AGAG CGGCG-CGACCGG TTTCCTCGATATTGC trd_A0246 232297 - 232722 + | cupin 2 conserved barrel domain protein trd_A0247 233458 - 233979 + | hypothetical protein TERM 107 234142 - 234182 + GF 72 -8.2 -4.18018 | gap 1, overlap 234138 AGGGTTGCTCCCGAC GGTGGAAC-GCGCGAGCCC CCGC GTGCCCGCGCCGTTCGATC TTTTGCGTGCGGGGG trd_A0248 233990 - 235093 + | NrtC protein trd_A0249 235060 - 235830 + | aliphatic sulfonates import ATP-binding protein SsuB TERM 108 235932 - 235922 - g 70 -5.4 -4.4009 | overlap 235930 CGGCAGTGCAGAAAA GAGT GAA ACTC CGGCAACGAGTAGCG TERM 109 236556 - 236541 - g 79 -6.1 -4.66833 | opp_overlap 236540 236551 GCGGAAGTCCAAAAA GCAGG GAAAAT CCTGC GCTTTAGCGGGGATG trd_A0250 235827 - 237077 + | sulfonate ABC transporter periplasmic sulfonate-binding protein trd_A0251 237074 - 237889 + | nitrate transport permease protein NrtB trd_A0252 238696 - 237959 - | cyclase trd_A0253 239349 - 238711 - | uridine 5'-monophosphate synthase (UMP synthase) (Fragment) trd_A0254 239497 - 239357 - | hypothetical protein TERM 110 240358 - 240340 - g 81 -11.6 -4.12188 | opp_overlap 240330 TCACCAGGTGGAAAA CGCCGGCG TGG CGCTGGCG AGTCTGCCCTGGTTG trd_A0255 239522 - 240886 + | folylpolyglutamate synthase (folylpoly-gamma-glutamatesynthetase) TERM 111 241850 - 241872 + G 83 -14.8 -3.2794 | opp_overlap 241845, overlap 241851 CCAGCAGCAAGTCCT CCGCGCGCTC CCG GAGCGCGCGC TTCGTCTCGATGCCC TERM 112 241851 - 241871 + G 86 -18.3 -2.5655 | opp_overlap 241845, overlap 241850 CAGCAGCAAGTCCTC CGCGCGCTC CCG GAGCGCGCG CTTCGTCTCGATGCC trd_A0256 241110 - 242141 + | cell envelope-related transcriptional attenuator TERM 113 242166 - 242125 - f 79 -10.2 -4.07568 | opp_overlap 242148, overlap 242128 TCGGCCCGCCGAAAA CGAGCAGC-GTGCGGTAGGC TTGG GCC-ACCGGACCGCTGCTGG AGGCGTGCCGGCTGG trd_A0257 242209 - 243120 + | hypothetical protein trd_A0258 243141 - 243986 + | alpha/beta hydrolase fold protein TERM 114 245181 - 245211 + G 73 -6 -4.36914 | GTGTCGTGCGGGTAG TCGACCTCCCGGGC TTC GTGCGCGACGTCGA TTTTCTCCCCGACGG trd_A0260 244133 - 245413 + | hypothetical protein trd_A0259 246246 - 245410 - | alpha/beta hydrolase fold protein TERM 115 245481 - 245437 - G 81 -3.4 -5.0133 | gap 1 CAGCTGGCGAAAAAA GCGC-TCGAGTGCAGCCAGGA AGGC TGCGGGCTGCTCCAGATGCAC GGTATGCCCGGCCGC TERM 116 246028 - 245979 - G 72 -11.3 -3.53444 | gap 1 TGACCGGTCCGGAAA CGAGTTCGCCGAGCAGGCTCGCCA GGT CGGCCA-CCTGCTCGGCAGCCGCG TAGCGGGTCGGCGCG menD 248000 - 246249 - | 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase TERM 117 246782 - 246768 - G 82 -7 -4.63184 | opp_overlap 246769 AACGGAGGGGAAAAA CGCGTC CAG GTCGCG GACCGGCATGCTGTT TERM 118 247361 - 247343 - G 81 -16 -3.01712 | GCGGCCCGGCCAATA CGACGCCG CGT CGGCGTCG AGCCAGTAACGCCGC trd_A0262 249389 - 248004 - | salicylate biosynthesis isochorismate synthase (Isochorismate mutase) TERM 119 249222 - 249185 - G 71 -14.1 -2.73364 | opp_overlap 249161 249158, overlap 249218 CGGCCAGCCCAACCA GCGCCTCCTCTCGTTCG GGGA CGAGCCAGAGGACGCGC GGGAGGTGGCTGGCC trd_A0263 250036 - 249386 - | transcriptional regulator, TetR family TERM 120 249922 - 249869 - G 87 -18.1 -2.75481 | gap 1, overlap 249871 GGGGAAGTGGAAGTA GACGCCACCCTTGGAAGTGGCGGCCG CCT CGGCCACCTCGTCCATGG-TGGCCTC GCGGTAGCCGCGGCG TERM 121 249920 - 249871 - G 79 -14.9 -2.92246 | gap 1, overlap 249869 GGAAGTGGAAGTAGA CGCCACCCTTGGAAGTGGCGGCCG CCT CGGCCACCTCGTCCATGG-TGGCC TCGCGGTAGCCGCGG trd_A0264 250215 - 250328 + | hypothetical protein trd_A0265 251594 - 250728 - | glycerophosphoryl diester phosphodiesterase trd_A0266 251745 - 252743 + | sn-glycerol-3-phosphate transport system permease protein UgpA trd_A0267 252736 - 253578 + | binding-protein-dependent transport systems inner membrane component trd_A0268 253637 - 255067 + | extracellular solute-binding protein, family 1 TERM 122 255099 - 255131 + G 100 -15.6 -4.33808 | gap 1, overlap 255101 GATCGCCCCATCCGG AACCTGGGCTCCCGC TCCG GCGGG-GCCCAGGTC TTTTCCGTTCGTTTG TERM 123 255101 - 255129 + G 93 -18.2 -3.75653 | gap 1, overlap 255099 TCGCCCCATCCGGAA CCTGGGCTCCCGC TCCG GCGGG-GCCCAGG TCTTTTCCGTTCGTT trd_A0269 255064 - 255258 + | hypothetical protein trd_A0270 255307 - 255465 + | hypothetical protein trd_A0271 255992 - 255477 - | nudix hydrolase, putative trd_A0272 256398 - 255997 - | hypothetical protein trd_A0273 257022 - 256639 - | hypothetical protein TERM 124 256666 - 256692 + g 91 -16.6 -3.55444 | CGTTCCGCTTTCCTC CTCGCGCTGGAG AGC CTCCAGGGCGAG TTTGGCCAGTCCACC trd_A0274 257918 - 257019 - | ATPase, RecA-superfamily trd_A0275 258143 - 259816 + | thymidylate synthase trd_A0276 261037 - 260108 - | hypothetical protein trd_A0277 261491 - 261060 - | hypothetical protein trd_A0278 261946 - 265020 + | hypothetical protein trd_A0279 265017 - 265640 + | hypothetical protein TERM 125 267081 - 267062 - g 84 -13.6 -3.57731 | CGAACCAGGATACAA CACGGACC AGCC GGTCCGTG AGCGTGGCTGGACGC trd_A0280 265659 - 268598 + | DNA methylAse containing a Zn-ribbon TERM 126 268991 - 269024 + G 100 -19.7 -3.86015 | gap 1 CCACGGGAAGGCCGG CGTGATCACGCGAGCC GAT GGCTCGCG-GATCGCG TTTCTGGGAAGCGTC TERM 127 270995 - 271014 + G 79 -4.2 -4.96848 | gap 1, opp_overlap 270989, overlap 270999 AAGAATCCAGCGGAT CGGTCAGCC TCG GGC-GGTCG TTTTTCTCTGCAACC trd_A0281 268611 - 271313 + | helicase, Snf2 family TERM 128 271640 - 271629 - T 91 -7.2 -5.08824 | opp_overlap 271630, overlap 271630 GCTGTAGCCAAAAAA GGCG CGGT CGCC TCGCTGTCCTCGCGA trd_A0282 272170 - 271733 - | hypothetical protein trd_A0283 273051 - 272173 - | hypothetical protein TERM 129 272767 - 272748 - G 77 -4.8 -4.64676 | overlap 272732 GGACCCGCAACAAAA GCGCGCTG CCGC CGGCCCGC TGGTCCCACACTGAC trd_A0284 273591 - 273076 - | hypothetical protein trd_A0285 273985 - 273596 - | hypothetical protein trd_A0286 274359 - 274243 - | hypothetical protein trd_A0287 275192 - 274365 - | hypothetical protein TERM 130 275255 - 275279 + r 75 -6.4 -4.38712 | opp_overlap 275274, overlap 275256 AGAATGGGGGGCGGG TTGTCAAGCG CTGAA CGCATGACAG TTTTGTCACGGTCGG trd_A0288 276136 - 275561 - | hypothetical protein trd_A0289 277037 - 276462 - | hypothetical protein trd_A0290 277631 - 277167 - | putative ribonuclease BN trd_A0291 278015 - 277647 - | hypothetical protein trd_A0292 279793 - 278117 - | peptidase S1 and S6, chymotrypsin/Hap, putative TERM 131 279763 - 279745 - G 72 -11.6 -3.53444 | opp_overlap 279740 279756 GGAGTCGGGTGGAAA GCGCTGCG AAC CGCCGCGC TCGCGTCGTCTGCTG trd_A0293 280148 - 279798 - | hypothetical protein TERM 132 281286 - 281262 - gH 79 -11.4 -3.85539 | TACACCGAGATTAAA GGGCCAGCGA TCCGT TCGCTGGCGC GCCTCTTCGACGTGA trd_A0294 280110 - 281801 + | methyl-accepting chemotaxis protein trd_A0295 281870 - 283291 + | methyl-accepting chemotaxis sensory transducer trd_A0297 283339 - 283473 + | hypothetical protein trd_A0296 283781 - 283470 - | hypothetical protein trd_A0298 283752 - 283916 + | hypothetical protein TERM 133 283991 - 284014 + G 75 -3.7 -4.70659 | GGGGCAGGAGCAGCG GCGGGCGAG AGCTGG CTCGAACGC TTTTTCCATCTACGG trd_A0299 283958 - 285409 + | xanthine/uracil permease trd_A0300 285636 - 285418 - | hypothetical protein trd_A0301 285832 - 285659 - | hypothetical protein trd_A0303 285831 - 285992 + | hypothetical protein trd_A0302 287281 - 285971 - | cation diffusion facilitator family transporter menB 287835 - 288662 + | naphthoate synthase menA 288676 - 289599 + | 1,4-dihydroxy-2-naphthoate octaprenyltransferase TERM 134 290166 - 290194 + G 71 -7.9 -4.07687 | overlap 290170 CGGCTCGATGCGAAC GCTTCCGCGGCGG TCG CCGCTGCGCTCGC TTTTGCGCGGGCAGT menC 289596 - 290681 + | O-succinylbenzoic acid (OSB) synthetase trd_A0307 290702 - 291079 + | hypothetical protein TERM 135 292090 - 292132 + G 75 -14 -3.01712 | GGCGGGACCAGGGGA GCCGGGGGAGATCACCGTAC GCG GTCCAGTGGTCACGCCCGGC TATTGGCGGCGACCC menE 291092 - 292555 + | O-succinylbenzoate-CoA ligase TERM 136 293682 - 293706 + G 70 -11.4 -3.3382 | CCTGCTCGATTCGGG CGCGCGCAAC ATCCG GTTGCGCACG TTGATCTATGCTGCC trd_A0309 292678 - 295191 + | NAD-dependent malic enzyme (NAD-ME) trd_A0310 298048 - 295268 - | cation-transporting ATPase Pma1 trd_A0311 299493 - 298105 - | UspA domain protein, putative trd_A0312 299730 - 299587 - | hypothetical protein TERM 137 299711 - 299746 + g 89 -13.2 -4.11216 | CGGCTGGACCATGAG CTCGAGGGGGCGGATC CCAT GAACCGCTCCTTCGCG TTTTGCGGCTCGCGG trd_A0313 299964 - 300488 + | hypothetical protein trd_A0315 300523 - 301572 + | protease do trd_A0314 302822 - 301557 - | permease of the major facilitator superfamily trd_A0316 302795 - 303124 + | hypothetical protein trd_A0317 304161 - 303190 - | D,D carboxypeptidase TERM 138 304177 - 304145 - G 78 -7.5 -4.37658 | AAGCGGCGGACAAAA GCGAAGAAGCCCCTC ACT GCGGTGCTCCCACGC TCGTCATGCCATCTG trd_A0318 305006 - 304158 - | hypothetical protein trd_A0319 305797 - 305003 - | methyltransferase, putative trd_A0320 306966 - 305812 - | protease DO family protein TERM 139 307093 - 307121 + G 77 -13.1 -3.36289 | opp_overlap 307086 307089 GGGAGAGACGACCGG GCCGAGCGACC TCGAACT GGTCGCCCGGC TTCGTTCCCGTGATC trd_A0321 307073 - 307639 + | RNA polymerase, sigma-24 subunit, ECF subfamily trd_A0322 307636 - 308382 + | hypothetical protein TERM 140 308604 - 308569 - T 100 -21.2 -2.94218 | opp_overlap 308588, overlap 308572 ATGGCGGAGGAGAGA GAACGAGCCCGGGGGA ATGC TGCCCCGGGCTCGCTC GTCGAGTTCCGGATC TERM 141 308601 - 308572 - T 100 -19.3 -3.61902 | opp_overlap 308588, overlap 308569 GCGGAGGAGAGAGAA CGAGCCCGGGGGA ATGC TGCCCCGGGCTCG CTCGTCGAGTTCCGG trd_A0323 310462 - 308618 - | oligopeptide ABC transporter periplasmic oligopeptide-binding protein trd_A0324 311470 - 310544 - | oligopeptide transport system permease protein OppC TERM 142 311250 - 311263 + g 70 -8.1 -4.02334 | opp_overlap 311260 GGAAACCGGGAGACG GCCGA AAAA TCGGC TTTGTCGTATGGGTA trd_A0325 312430 - 311498 - | dipeptide transport system permease protein DppB TERM 143 312729 - 312686 - R 80 -14.5 -3.05816 | gap 1, opp_overlap 312694 GCACCGTGCACGGAA CCGGACGAGCCGGAGGGGGC GCGCT GCCCACTCCGGCTTG-CTGG GGTGCCTGGGGGATG TERM 144 312694 - 312722 + r 89 -18.1 -3.16881 | opp_overlap 312686 CACGGAACCGGACGA GCCGGAGGGGGCG CGC TGCCCACTCCGGC TTGCTGGGGTGCCTG trd_A0326 313786 - 312746 - | thioredoxin reductase trd_A0327 314685 - 313789 - | catechol 2,3-dioxygenase trd_A0328 316361 - 314715 - | thiamine pyrophosphate enzyme, central domain family trd_A0329 317194 - 316394 - | ABC transporter, ATP-binding protein trd_A0330 318807 - 317191 - | feruloyl-CoA synthetase TERM 145 318723 - 318676 - G 82 -15.7 -3.14881 | opp_overlap 318693, overlap 318680 TAAGGCGTGCAGGAA GTGAGTGA-GGCGCAAGACGCCC AACT GGGCGTCTTGCGCCGTC-CAGAC AGCCTGGTGCCACTG TERM 146 318719 - 318680 - G 89 -19.5 -2.56596 | opp_overlap 318693, overlap 318676 GCGTGCAGGAAGTGA GTGA-GGCGCAAGACGCCC AACT GGGCGTCTTGCGCCGTC-C AGACAGCCTGGTGCC trd_A0331 319936 - 318824 - | ABC transporter, quaternary amine uptake transporter (QAT) family, substrate-binding protein trd_A0332 320873 - 320064 - | ABC nitrate/sulfonate/bicarbonate family transporter, inner membrane subunit trd_A0333 321656 - 320883 - | 3-hydroxyacyl-CoA dehydrogenase NAD-binding trd_A0334 322393 - 321677 - | enoyl-CoA hydratase/isomerase trd_A0335 323571 - 322390 - | amidohydrolase 3 trd_A0336 324174 - 323584 - | peptide synthase trd_A0337 326534 - 324171 - | carbon monoxide dehydrogenase large chain (COdehydrogenase subunit L) (CO-DH L) trd_A0338 327397 - 326531 - | 2,3-dihydroxy-2,3-dihydro-phenylpropionate dehydrogenase TERM 147 326732 - 326746 + g 70 -5.6 -4.23674 | overlap 326741 TGCCCGATCCCCCGT CGCATC GTC GACGCG TTTGTCTTGCTCGCG trd_A0339 327651 - 327394 - | dihydrodiol dehydrogenase trd_A0340 328228 - 327674 - | 3-phenylpropionate dioxygenase subunit beta (Digoxigenin subunit beta) trd_A0341 329632 - 328265 - | 3-phenylpropionate dioxygenase subunit alpha (Digoxigenin subunit alpha) trd_A0342 330694 - 329666 - | aldolase trd_A0343 331549 - 330806 - | GntR family transcriptional regulator TERM 148 331672 - 331684 + r 72 -6.9 -4.29139 | overlap 331669 ATGGCCGGTATTCGT CGCGT CGG GCGCG TTGTTTTACCTTTCG TERM 149 332041 - 331998 - R 78 -13.1 -3.48276 | gap 1, opp_overlap 332006, overlap 331999 GCGCCGTGCACAGAA GCGGACGAGCCGGAGTGGGC GCGCT GCCCACTCCGGCTTG-CTGG GGTGCCTGGGGGATG TERM 150 332040 - 331999 - R 81 -16.6 -2.68823 | gap 1, opp_overlap 332006, overlap 331998 CGCCGTGCACAGAAG CGGACGAGCCGGAGTGGGC GCGCT GCCCACTCCGGCTTG-CTG GGGTGCCTGGGGGAT TERM 151 332006 - 332034 + r 100 -22.5 -3.16881 | opp_overlap 331999 331998 CACAGAAGCGGACGA GCCGGAGTGGGCG CGC TGCCCACTCCGGC TTGCTGGGGTGCCTG trd_A0344 333080 - 332058 - | thioredoxin reductase trd_A0345 333259 - 334704 + | V-type sodium ATP synthase subunit J (Na(+)-translocating ATPase subunit J) TERM 152 335934 - 335965 + G 81 -11.6 -4.07687 | gap 1 CTCTTGGCGATTCTG GCGACGATCCG-TGG CAG CCAACGAGTCGTCGC TTTTAGCCGCGAGGT trd_A0346 334887 - 336293 + | potassium uptake protein KtrB, putative trd_A0347 336318 - 336953 + | K+ uptake transporter trka family protein trd_A0348 337006 - 337785 + | fumarylacetoacetate hydrolase family protein TERM 153 337793 - 337822 + F 81 -3.6 -4.99861 | gap 2, overlap 337791 337784 337783 337799 GTCGTTGAGGAGGGT GCGGTGGCCGAGTC ACCG GACT-GGCT-TCGC TTTTTCTCGTTGATC trd_A0349 337796 - 338428 + | HD domain containing 2 trd_A0350 338473 - 339810 + | magnesium and cobalt efflux protein CorC trd_A0351 340260 - 340754 + | hypothetical protein TERM 154 341043 - 341076 + G 75 -9.5 -3.94811 | gap 1, opp_overlap 341056 341057, overlap 341044 341071 TGCTGTGAGGATGGA TGCGGC-CGAACAACG ATC CGCGGTTCGTGCCGCG TTTCTCGCTGCTGTT TERM 155 341534 - 341577 + G 76 -13.8 -3.14234 | gap 1, overlap 341533 341532 TGGTGTCGGCCTCGT C-TCCAGTGGCCGAGCGCGAG CTC CGCTCGCTCGTCCGCTGGACG TATCTTGGATTCATC TERM 156 342107 - 342121 + G 88 -11.4 -4.32034 | TTTACCTTTACGGCG CGCTCG GCT CGAGCG TTTTGGTGATCCTGG trd_A0353 340795 - 342429 + | hypothetical protein trd_A0352 342971 - 342390 - | NTPase trd_A0354 344048 - 342975 - | ABC transporter, permease protein TERM 157 343554 - 343539 - G 84 -6.8 -4.7657 | overlap 343548 GAAAAAGGCGAAAAA GCCGAT GAAG ACCGGC GCGAACGTGTCGAGC TERM 158 343590 - 343580 - G 72 -8.2 -4.08216 | CGAGCTCGTCGAAAA CGGG ACT CCCG GTCACGTAGTCGATG trd_A0355 344848 - 344045 - | ABC transporter, ATP-binding protein trd_A0356 345138 - 346856 + | glycerol-3-phosphate dehydrogenase 2 trd_A0357 347112 - 346975 - | hypothetical protein glpK 347068 - 349200 + | glycerol kinase trd_A0359 349438 - 349280 - | hypothetical protein trd_A0360 349955 - 349473 - | glyoxalase family protein trd_A0361 350302 - 350072 - | hypothetical protein trd_A0362 351810 - 350521 - | 4-aminobutyrate aminotransferase TERM 159 353181 - 353202 + G 81 -7.9 -4.56597 | overlap 353177 CGCTGCTTCGCCGAT CGTCGCTCG TTTC CGAGCAGCG TTTTTCGGCCGGCAC trd_A0363 351950 - 353230 + | major facilitator superfamily MFS_1 TERM 160 353803 - 353814 + G 72 -7.2 -4.27316 | CCTCCCGGCTTGGCT CGCC TTCC GGCG TTTTCGCTTGCCGGA trd_A0364 353243 - 354463 + | multidrug resistance protein, putative trd_A0365 354482 - 354925 + | putative 4-hydroxybenzoyl-CoA thioesterase trpS 354977 - 355981 + | tryptophanyl-tRNA synthetase trd_A0367 355996 - 356340 + | cupin 2, conserved barrel domain protein trd_A0368 356363 - 356584 + | hypothetical protein trd_A0369 357016 - 356630 - | monovalent cation/proton antiporter, MnhG/PhaG subunit trd_A0370 357309 - 357013 - | multiple resistance and pH regulation protein F trd_A0371 357779 - 357306 - | cation antiporter trd_A0372 359293 - 357776 - | Na(+)/H(+) antiporter subunit D (Multiple resistance and pH homeostasis protein D) (Mrp complex subunit D) trd_A0373 359721 - 359278 - | NADH-ubiquinone oxidoreductase chain 4l trd_A0374 360147 - 359725 - | cation:proton antiporter, putative trd_A0375 362474 - 360144 - | Na(+)/H(+) antiporter subunit A (Multiple resistance and pH homeostasis protein A) (Mrp complex subunit A) TERM 161 360406 - 360386 - G 72 -3.1 -4.62069 | overlap 360366 360387 TCGTCATCCCAAAAA GCATGGCGA CGA TCGCATCGC GGACACGGGCGCGGG trd_A0377 362801 - 363565 + | glyoxalase family protein trd_A0376 364167 - 363562 - | hypothetical protein trd_A0378 364348 - 364662 + | hypothetical protein trd_A0379 364706 - 364876 + | hypothetical protein merA 366687 - 365005 - | mercuric reductase trd_A0381 367235 - 366684 - | hypothetical protein TERM 162 367306 - 367336 + H 73 -5.5 -4.41548 | gap 1, opp_overlap 367287 367306 367307, overlap 367307 ATACGGAAAGACGAA TGCAAGTTATCGCA TTGC TGCG-TATCTTGCG TTTTATAGAATCTGA trd_A0382 367493 - 367633 + | hypothetical protein trd_A0383 367650 - 368168 + | NADH:ubiquinone oxidoreductase, nadh-binding trd_A0384 368419 - 369420 + | putative hypoxanthine phosphoribosyl transferase with additional GAF motif trd_A0385 370674 - 370258 - | hypothetical protein trd_A0386 372066 - 370948 - | alcohol dehydrogenase B trd_A0387 372158 - 372292 + | hypothetical protein trd_A0388 372388 - 372864 + | hypothetical protein TERM 163 373764 - 373811 + G 80 -15.4 -2.79183 | gap 1, overlap 373759 373757 ACTGAGTCGGGGCGC GCGAGCTCCCGAGC-GCCTGCTG TTC CCGCTGGCTGCGCTGGGGCTCGC TCTCGTACCGCTGGC TERM 164 373981 - 373999 + G 71 -8 -4.08706 | GTGCCCATCGTGGCC CCACCGCC GGG GGTGGAGG TTTATCTGGTCGGGC trd_A0389 372904 - 374268 + | 4Fe-4S ferredoxin, iron-sulfur binding domain protein TERM 165 374287 - 374310 + F 75 -13.9 -3.00923 | overlap 374282 AACGGACTGCTGATG CGCGCCGAA CCACAC TTCGGCGCG TCTGTCGTCTTCGCC trd_A0390 374544 - 377975 + | ATP-dependent DNA helicase RecQ trd_A0391 377959 - 378600 + | hypothetical protein trd_A0392 378929 - 379084 + | hypothetical protein trd_A0393 379110 - 379661 + | cytochrome a1 subunit II trd_A0394 379671 - 381401 + | heme/copper-type cytochrome/quinol oxidase, subunit 1 trd_A0395 381499 - 383310 + | protoheme IX farnesyltransferase (Heme O synthase) (HemeB farnesyltransferase) TERM 166 383442 - 383475 + T 72 -3 -4.61231 | opp_overlap 383460, overlap 383444 TCACGGATCGCGGAT CAGGGGCAGCGT GGAACAGTGG ATGCCGCCCCCG TTTTTGAGGATCTCG trd_A0396 384461 - 383427 - | amidinotransferase trd_A0397 384791 - 385660 + | histidinol-phosphatase trd_A0398 385733 - 387022 + | hypothetical protein TERM 167 387173 - 387195 + T 74 -10.6 -3.74361 | opp_overlap 387161 ACAGGTGCCCAGTGG GCTCCCTC AGGTGAA GAGGGAGC TTGTTCATCCCTCTG trd_A0399 387511 - 387200 - | hypothetical protein TERM 168 387466 - 387501 + g 70 -14 -2.64794 | CGCGCTGCGAACCCG CCTGGAGTCGATCCGC GGCC GTGGATCGACCCCAGC TGCTCTCCAATTGGA trd_A0400 389796 - 387529 - | xanthine dehydrogenase molybdenum-binding subunit trd_A0401 389894 - 390028 + | hypothetical protein pfkB 390037 - 391011 + | 1-phosphofructokinase trd_A0403 391349 - 391858 + | hypothetical protein trd_A0404 391871 - 392629 + | hypothetical protein trd_A0405 392714 - 393700 + | hypothetical protein trd_A0406 393755 - 394579 + | hypothetical protein trd_A0407 394933 - 396174 + | amidohydrolase trd_A0408 396175 - 396699 + | deoxyuridine 5'-triphosphate nucleotidohydrolase (dUTPase) (dUTP pyrophosphatase) (MjDUT) trd_A0409 396753 - 397160 + | hypothetical protein trd_A0410 397174 - 397683 + | membrane protein of unknown function, putative trd_A0412 397727 - 400210 + | peptidase S16, lon domain protein trd_A0411 400377 - 400207 - | hypothetical protein trd_A0413 400450 - 400575 + | hypothetical protein trd_A0414 402161 - 400731 - | asparate kinase, monofunctional class TERM 169 401089 - 401074 - G 76 -6.1 -4.46212 | CGCCGGACGACAAAA CCCAG GCTGTG CTGGG ACGACGCCTGGAAGA TERM 170 401684 - 401703 + g 73 -12.2 -3.39327 | TGGCGCTCCCGAAGT GGTCATCG GTCA CGATGACC TTGTCGCTGTCGACC trd_A0415 402488 - 403798 + | alanine-rich protein, putative TERM 171 403813 - 403859 + F 89 -13.1 -4.07568 | gap 1, overlap 403809 403814 AGCGATGCGGTGTAA C-CGGACCGGGTGCTCGTTC GTTGTATG GGATGAGCACCCGGTCAGTG TTTTGCGAGCGGAAA TERM 172 403814 - 403857 + F 91 -16.8 -3.63744 | overlap 403809 403813 GCGATGCGGTGTAAC CGGACCGGGTGCTCGTTC GTTGTATG GGATGAGCACCCGGTCAG TGTTTTGCGAGCGGA trd_A0416 403985 - 404788 + | hypothetical protein trd_A0417 404958 - 406397 + | autotransporter-associated beta strand repeat protein, putative TERM 173 406475 - 406419 - f 93 -16.6 -3.87815 | gap 1 GGTCACGTTCACAAA CGCT-CAGTCGGTGCGGAGCTAGCC TCGAGATC GGCTGGCTCCGCACCGTCGGCAACG GGATCAGTACTATCC TERM 174 406980 - 406970 - g 75 -6.8 -4.36914 | TGGCCCTGGACAAAA CGGT CTC ACCG CTCGCCGTTGGCAGG trd_A0418 406543 - 407733 + | conserved repeat domain protein, putative trd_A0419 408219 - 408079 - | hypothetical protein trd_A0420 408227 - 408409 + | SelT/SelW/selH thiI 408461 - 409684 + | thiamine biosynthesis/tRNA modification protein ThiI trd_A0422 410525 - 410686 + | hypothetical protein trd_A0423 410983 - 410708 - | hypothetical protein TERM 175 410919 - 410893 - Gf 71 -9.5 -3.70773 | gap 1 CGTGATAGGGAACAA TCTCCAG-GACG TAAC CGTCACCGGAGA GCATGACCGGTCGAA trd_A0424 410976 - 411131 + | hypothetical protein trd_A0425 412803 - 411196 - | band 7 protein TERM 176 411604 - 411628 + g 74 -2 -4.74103 | gap 1 CTGGGCGAACAGTTC GGC-CTGGAGG GCCT CAGCCAGTGCC TTTTTGGCTTCCGCC TERM 177 412107 - 412137 + g 72 -11 -3.54424 | overlap 412113 GCAGCGCTTGCGCGC GCCGAACCCGTGCG TCA CGCTCGGCTTCTGC TTTGCCGACCTCGGC trd_A0426 413354 - 412800 - | hypothetical protein trd_A0427 413631 - 413404 - | hypothetical protein TERM 178 413624 - 413584 - G 100 -22 -4.36914 | gap 1, opp_overlap 413614 GCGGGGCGGACAAAA GACTCGGCGCGGATCGACC GCGC AGTCGA-CCGCGCCGAGCC GGCTCATGGGTTGAG eat 415190 - 413652 - | ethanolamine permease trd_A0429 416003 - 415221 - | 2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase (2,5-ddol dehydrogenase) trd_A0430 417403 - 416018 - | glutamate--ammonia ligase TERM 179 417644 - 417675 + G 71 -12.2 -3.29829 | opp_overlap 417644 CCAGAATCGATAGGA GCCGGACACACCGC TACA GTGCCGTGTCCGGC TTGTCCAGAGCTCTC trd_A0431 417521 - 417712 + | hypothetical protein TERM 180 418861 - 418894 + G 79 -11.7 -3.92075 | gap 1 TCGTGGCCCTAGCCA CGCTGC-ACTGGTGGG CGG CTCGCCAGCCGCAGCG TTTCTGGCTGACAGT TERM 181 418980 - 419006 + G 71 -10 -3.59979 | GAATGGGGTCCGCCG GCCCGCTACCTG GTG CCGGTGGCTGGC TTTGCGGTCGCCCCC trd_A0432 417792 - 419369 + | hypothetical protein trd_A0433 419399 - 419803 + | hypothetical protein trd_A0434 420017 - 419877 - | hypothetical protein TERM 182 420011 - 420046 + g 100 -16.8 -4.36914 | overlap 420013 CAGCGTGGAGCCAGT GGCGCACCCGGCCGGG ATAT CCTGGTCGGGTGCGTG TTTTCTGGGAAGCGA TERM 183 420013 - 420044 + g 100 -21.6 -3.79419 | overlap 420011 GCGTGGAGCCAGTGG CGCACCCGGCCGGG ATAT CCTGGTCGGGTGCG TGTTTTCTGGGAAGC trd_A0435 420119 - 421216 + | hypothetical protein TERM 184 421246 - 421273 + F 100 -20.6 -3.36273 | opp_overlap 421238 CAGCGAAGCTCACGA GCGGGCTCGGGA GGAC TCCCGGGCCCGC TTCCTGTTCCCCAGC TERM 185 421417 - 421397 - g 77 -5.3 -4.65895 | overlap 421400 GTGCTGAGCGAAAAA CGAGCCGTA TAC TGCGGCTGG TGAGCCGCGGGGGTG trd_A0437 421318 - 422358 + | integral membrane protein map 423104 - 422355 - | methionine aminopeptidase, type I trd_A0438 423347 - 423871 + | hypothetical protein trd_A0439 423885 - 424385 + | copper binding protein, plastocyanin/azurin family trd_A0440 424568 - 425116 + | hypothetical protein trd_A0441 425113 - 425526 + | hypothetical protein TERM 186 425904 - 425942 + F 78 -16.1 -2.73681 | overlap 425907 CTCATCTCCTCCTCA CGTGCGAGGCAGCTG GCTTTTCCG CAGCTGCCTCGTGCG TCGTTCGGATGGGTA TERM 187 427250 - 427266 + G 76 -9.3 -4.07568 | ATCTGGAAGGGCTGG CCGCGGC GAC GCCGGGG TTTTCCGGAGCGGAC ftsH 425905 - 428004 + | cell division protein FtsH TERM 188 428171 - 428188 + G 70 -5.5 -4.25104 | overlap 428172 AGTACAGCCGGTGGT TCGTCGT CATC ACGGCGG TTTTCGTCACCACGC TERM 189 428380 - 428390 + G 72 -8.2 -4.07568 | GCGTGCAATCTCTTG GCCG TGG CGGC TTTTGCGGCGACCCA trd_A0443 428098 - 428823 + | hypothetical protein trd_A0444 430839 - 428878 - | twin-arginine translocation pathway signal trd_A0445 431015 - 431176 + | hypothetical protein fabD 431176 - 432126 + | malonyl CoA-acyl carrier protein transacylase fabF 432148 - 433395 + | beta-ketoacyl-acyl-carrier-protein synthase II TERM 190 433431 - 433459 + T 100 -21.9 -2.96216 | GCGGTTCGTGCGTGA CTCGCTCACCAGT CGA ACTGGTGAGCGAG TGTCTCGTCCTCGAC trd_A0448 435166 - 433436 - | DNA mismatch repair protein MutL mutS 437833 - 435188 - | DNA mismatch repair protein MutS trd_A0450 438362 - 438153 - | hypothetical protein trd_A0451 438396 - 438680 + | hypothetical protein trd_A0452 438673 - 439938 + | aspartate aminotransferase (transaminase a) (aspat) TERM 191 440628 - 440652 + G 70 -7.8 -4.02334 | overlap 440610 ATGGGGTGCGCCGTT GGTGGTTGCC CTCCT GGCGATCGCC TTTCTCGTCTCGCTG trd_A0453 440479 - 441000 + | cytochrome c oxidase, subunit II TERM 192 441956 - 441971 + G 74 -2.4 -4.72986 | overlap 441957 GTTCGGCTCCTATGC AGTCGG TGTA CCGGCC TTTTTCGTCACGATC trd_A0454 441015 - 442499 + | heme-copper respiratory oxidase family TERM 193 442694 - 442725 + G 73 -14.4 -2.80816 | gap 1 CATCTTCCGATCGCG GCGCTGCTGGCTCGC GGC GCT-GCCAGCGGCGC TCTCCTCGGTGCGGC trd_A0455 442529 - 443401 + | formate/nitrite transporter TERM 194 443906 - 443937 + G 75 -2.9 -4.72272 | gap 1 ATGCTGTCCTCGCCC GGCGGTG-GCTCCA CGATC TGGAGCACCTCACC TTTTTCCTGGGGGCG trd_A0456 443398 - 444273 + | cytochrome c oxidase Caa3 assembly factor (Caa3_CtaG) superfamily trd_A0457 444320 - 445639 + | lysine-specific histone demethylase 1 trd_A0458 446485 - 445709 - | HAD-superfamily subfamily IIA hydrolase TERM 195 447141 - 447101 - g 88 -16.1 -3.3514 | opp_overlap 447104 ACTCACAGGCGAGAA CCTGGCGGGCGAGCACC TGCTGGG GGTACTCGCCGGCCTGG TTGGCCTCTCGCTGG trd_A0459 446769 - 447620 + | integral membrane protein DUF6 trd_A0460 447675 - 448664 + | 2-hydroxy-3-oxopropionate reductase TERM 196 448857 - 448841 - T 75 -4.3 -4.62069 | overlap 448842 CTTGCAGCCCAAAAA CCGACAC TAT GAGTCGA TCGCGTCGCTGAGCT trd_A0461 450356 - 448872 - | glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADTsubunit A) TERM 197 450114 - 450104 - G 85 -5.4 -4.98531 | overlap 450097 GCTTGAAATCAAAAA GATC TTT GATC GCGGTCGGTACACCA trd_A0462 451200 - 450496 - | hypothetical protein trd_A0463 452884 - 451682 - | crispr-associated protein, Csx2 family trd_A0465 453059 - 454063 + | hypothetical protein trd_A0464 454511 - 454047 - | hypothetical protein trd_A0466 455362 - 454577 - | putative integral membrane protein trd_A0467 455570 - 455409 - | hypothetical protein trd_A0468 456471 - 455626 - | ABC transporter, carbohydrate uptake transporter-1 (CUT1) family, permease protein trd_A0469 457481 - 456468 - | binding-protein-dependent transport systems inner membrane component TERM 198 457203 - 457188 - G 100 -7.6 -5.31275 | opp_overlap 457187 457190 GCCGATCAGAAAAAA GATCGT GAAG ACGATC GTGTTGCGGAGATCG TERM 199 457449 - 457395 - G 100 -19.3 -3.19157 | gap 1, overlap 457396 GACGAACGGGATGAA GCGATCGACGCGG-GGGAAGCGGACG CGCG CTTCCGCTTCCCGCCGCGCCACTCGT GGTCGGACCTGTTCG TERM 200 457448 - 457396 - G 100 -22.8 -2.51173 | gap 1, overlap 457395 ACGAACGGGATGAAG CGATCGACGCGG-GGGAAGCGGACG CGCG CTTCCGCTTCCCGCCGCGCCACTCG TGGTCGGACCTGTTC trd_A0470 458880 - 457519 - | extracellular solute-binding protein family 1 TERM 201 457993 - 458034 + g 70 -11 -3.33815 | gap 3, overlap 457996 GGCGGTCCCATCGAT GACCCGCTGGGCGGCATCAGC CCA GCTGA-GC-GCCGAGCGG-TC TTCGTTGGCGAAGCT TERM 202 457996 - 458032 + g 78 -13.8 -3.23853 | gap 2, overlap 457993 GGTCCCATCGATGAC CCGCTGGGCGGCATCAGC CCA GCTGA-GC-GCCGAGCGG TCTTCGTTGGCGAAG trd_A0471 459743 - 458931 - | GntR-family transcriptional regulator trd_A0472 460018 - 459740 - | hypothetical protein trd_A0473 461292 - 459979 - | crispr-associated protein, Csm1 family TERM 203 460451 - 460423 - GR 77 -10.9 -3.72324 | GAGCTGGAGGAAGAA GGAGCGCCCGC GCAGGCT GCGGGCGGCCC GTGCAGCGGTGAGCG trd_A0474 462394 - 461615 - | hypothetical protein TERM 204 462612 - 462642 + H 73 -12.5 -3.30443 | gap 1, opp_overlap 462607, overlap 462613 GTACAGCGAACGCGG TCGGCCAGCTGGGC CCTC GCCC-GCCGGCCGG TTGGTGTCCTCCTGG TERM 205 462613 - 462641 + H 70 -13.8 -2.57944 | gap 1, opp_overlap 462607, overlap 462612 TACAGCGAACGCGGT CGGCCAGCTGGGC CCTC GCCC-GCCGGCCG GTTGGTGTCCTCCTG trd_A0475 463564 - 464514 + | 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase trd_A0476 464881 - 464579 - | hypothetical protein TERM 206 464753 - 464776 + g 80 -15.2 -3.14931 | GTCGACTGTCCACTT GCGCGCCGCG AGCT CGCGGAGCGC TTCCTCCCGCATGAC trd_A0477 464901 - 465107 + | hypothetical protein trd_A0478 465765 - 465226 - | hypothetical protein TERM 207 465466 - 465452 - G 71 -9.2 -3.76224 | opp_overlap 465452 GCGCTACCGACCAAA GCGGCC AGC AGCCGC TTGGTGATCGGCAAC TERM 208 465772 - 465815 + r 93 -11.6 -4.65168 | TCCGAGCATGGTCAC CTCCCCGACTCACACTCC GATGGTAA GGGGTGAGTGCCGGGGAG TTTTTGCGGTCTCGT trd_A0479 470729 - 465906 - | cation-transporting P-tyep ATPase TERM 209 467912 - 467946 + g 74 -12.9 -3.28924 | gap 2 CGGCACTGCCAGCGA GGACGACTGCCCGCTCG TCG CGTGCGG-CAG-CGTCC TTCTGGACCGGGATC trd_A0480 471218 - 470751 - | hypothetical protein trd_A0481 471471 - 471232 - | hypothetical protein trd_A0483 471532 - 471831 + | hypothetical protein manA 472929 - 471826 - | mannose-6-phosphate isomerase, class I TERM 210 472748 - 472782 + g 73 -12 -3.35371 | ACGAGTTCGCGGAGC GTCAGTCCCGCCAGCG GGC CGCTGGCGACACGGGC TTCGTTCGCGGTCTC trd_A0484 473387 - 472926 - | hypothetical protein trd_A0485 474658 - 473384 - | sodium/hydrogen exchanger lpdA 476152 - 474743 - | dihydrolipoyl dehydrogenase trd_A0487 477855 - 476659 - | hypothetical protein TERM 211 476984 - 476958 - G 74 -13 -3.20164 | TGAGATTGAACGGAA CCCACATCGCGA GGA TCACGACGCGGG TGAGGACACCGGTGA TERM 212 477965 - 477988 + r 80 -14.6 -3.16267 | gap 1 CCGTTCAGGAGGGAG CGGG-GGCACC ACC GGTGCCACCCG TTGGGTCTCGTTGGG trd_A0488 478697 - 477954 - | RNA polymerase, sigma-24 subunit, ECF subfamily trd_A0489 479313 - 478720 - | hypothetical protein trd_A0490 479945 - 479382 - | hypothetical protein TERM 213 479567 - 479590 + g 75 -12.4 -3.53012 | opp_overlap 479524 CGAGGTGTGGCACGC GCGCTGCACC CACC GGTGCATCGC TTTCCGGGACAGCGA trd_A0491 481725 - 479935 - | hypothetical protein trd_A0492 483674 - 482304 - | hypothetical protein TERM 214 483849 - 483867 + G 80 -8.8 -4.37886 | CACTGGGCTTGGACG GCTCGGAC GGA GTGCGAGC TTTTCTCCGCACTCA trd_A0493 483800 - 484051 + | hypothetical protein trd_A0494 485505 - 484294 - | hypothetical protein trd_A0495 486839 - 485535 - | hypothetical protein trd_A0496 487307 - 487432 + | hypothetical protein TERM 215 487587 - 487566 - T 75 -7.9 -4.22678 | gap 1, opp_overlap 487575 487577 GACAGGCAACAGAAA GCCG-GCTCG TCG CGCGCTCGGC CGGGTCGATCGCGCT trd_A0497 489270 - 488068 - | hypothetical protein TERM 216 489393 - 489432 + r 71 -10.6 -3.58726 | gap 1 GCCGCGAGCGGTCGA CGCGGTCGTCGTCGACTCG GCG CGGGACGAGGCCGAC-GCG TTCTCTCTCGAGAGG trd_A0498 490167 - 489568 - | hypothetical protein trd_A0499 490470 - 490357 - | hypothetical protein trd_A0500 490469 - 490672 + | hypothetical protein trd_A0501 490892 - 491260 + | hypothetical protein trd_A0502 493201 - 491945 - | hypothetical protein citZ 493435 - 494547 + | citrate synthase II TERM 217 495252 - 495294 + G 70 -2.4 -4.63486 | opp_overlap 495238 495228, overlap 495254 495256 ATCCAGTTGCTCGCG CTGCGCGAGACACTGCGCTC ACC GCTCGCGGTGTATCCCTCTG TTTTCTTGGAGACCT trd_A0504 494616 - 495524 + | type II secretion system protein E, putative trd_A0505 495551 - 496951 + | magnesium chelatase subunit ChlI trd_A0506 496977 - 499076 + | von Willebrand factor type A trd_A0507 499158 - 499451 + | hypothetical protein trd_A0508 500234 - 499455 - | biotin/lipoate A/B protein ligase trd_A0509 500518 - 500231 - | biotin/lipoate A/B protein ligase TERM 218 500457 - 500421 - G 75 -7.9 -4.24342 | GGCTCCAGGAAGAAA TCGCCCGTCACCTGCAC GTG GTGCAGTCGACCATCGA TCACCTCGCAGTCGA trd_A0510 500724 - 501263 + | membrane protein of unknown function TERM 219 501312 - 501368 + T 73 -13.6 -2.87881 | gap 1, opp_overlap 501315 TTGGACTACCCGGGA AGAGC-GCGTGGGCTGGACCGGGCGAA CTGG TACGATCGGTCCAGCCCACGCAGCGGG TCTCTCACCCGGTTC TERM 220 501365 - 501315 - T 100 -21.9 -3.03441 | gap 1, opp_overlap 501312 GACTACCCGGGAAGA GC-GCGTGGGCTGGACCGGGCGAA CTGG TACGATCGGTCCAGCCCACGCAGC GGGTCTCTCACCCGG trd_A0511 502221 - 501382 - | hydrolase, carbon-nitrogen family protein trd_A0512 502508 - 503017 + | hypothetical protein TERM 221 503071 - 503091 + F 70 -11.1 -3.31144 | opp_overlap 503051 CAGCAGGGCGGTGGA GCGTCGCCG CGA TGGCGATGC TTCTCGCCGTACCGC TERM 222 503493 - 503504 + G 70 -5.8 -4.30719 | overlap 503488 503489 CCGCGCCGGATCGAG GGTC CCTG GACC TTTGTTCTCCCGAGG trd_A0513 503082 - 504269 + | hypothetical protein TERM 223 504954 - 504975 + G 70 -7.3 -3.97368 | gap 1 CGAGCGATCGTGCGT GGAC-TCGAG CGT CTCGGCGTCC TTTCTGCGTTGCGCG TERM 224 506628 - 506642 + G 70 -2.1 -4.65895 | opp_overlap 506623 GCACCTAAAGCGATC GATGA GCGGG TCGTC TTTTTCGGTACCGAC trd_A0514 504831 - 506882 + | hydantoin utilization protein A (ORF2) trd_A0515 506879 - 508480 + | 5-oxoprolinase (5-oxo-L-prolinase) (Pyroglutamase) (5-OPase) trd_A0516 508787 - 510232 + | Tat (twin-arginine translocation) pathway signal sequence domain protein trd_A0517 510989 - 510252 - | hypothetical protein trd_A0518 511197 - 511009 - | hypothetical protein TERM 225 511237 - 511224 - gR 79 -2.4 -5.08824 | TCGCTATCGAAAAAA TCTC CAGGAC GAGA TCGACAGCGCTGCGT trd_A0519 511183 - 512316 + | protein of unknown function, transmembrane trd_A0520 513758 - 512364 - | FAD linked oxidase domain protein trd_A0521 514848 - 513889 - | isoaspartyl peptidase (ecaiii) (beta-aspartyl-peptidase) (isoaspartyl dipeptidase) trd_A0522 515508 - 514858 - | hypothetical protein trd_A0524 515533 - 515682 + | hypothetical protein trd_A0523 515793 - 515647 - | hypothetical protein TERM 226 515713 - 515733 + g 82 -6.8 -4.60041 | opp_overlap 515688 CGAGGCGGCCGTCAC GGGGATGC CGTCA GCGTCTCC TTTTTGGGCATGACT trd_A0525 519826 - 516647 - | error-prone DNA polymerase TERM 227 517720 - 517689 - G 71 -9.4 -3.73224 | gap 1, opp_overlap 517713, overlap 517690 GCACCGGCCAGGAAA TCGCCGCGCAGCG CCTCCAT CGCGGCGCG-CGA GCGCTTGCTCCCCAT TERM 228 518836 - 518798 - G 100 -21.8 -4.01888 | overlap 518801 AGCGCAGATGAGAAA GAACTCGGCGACACCGAG CCG CTCGATGACGCCGAGCTC GTGCTCGAGCTGGCG TERM 229 518833 - 518801 - G 100 -19.9 -4.1337 | overlap 518798 GCAGATGAGAAAGAA CTCGGCGACACCGAG CCG CTCGATGACGCCGAG CTCGTGCTCGAGCTG trd_A0526 520815 - 519841 - | hypothetical protein recA 522112 - 521039 - | RecA protein trd_A0528 522274 - 522435 + | hypothetical protein trd_A0529 522674 - 522883 + | chromate transporter trd_A0531 523401 - 523670 + | chromate transporter, chromate ion transporter trd_A0530 523789 - 523667 - | hypothetical protein trd_A0532 525487 - 524336 - | sulfate/thiosulfate import ATP-binding protein CysA 2 (Sulfate-transporting ATPase 2) trd_A0533 527058 - 525484 - | binding-protein-dependent transport systems inner membrane component TERM 230 525628 - 525595 - G 75 -7.3 -4.25104 | gap 1 CGCGTGCGACCAAAA GGCATCGGCGGTCGCG TTC CA-GACTGCCGTCGCC AAGGTCGTAAAACCG TERM 231 526300 - 526286 - G 81 -11.4 -4.03413 | overlap 526289 ACGGTGCGATAGAAA GCAGCG CGA CGCTGC CAGTGCCGCTCGGCG trd_A0534 528263 - 527115 - | extracellular solute-binding protein, family 1 TERM 232 528065 - 528085 + g 71 -12.5 -3.25823 | GGGAGCGTGTCATCA CGGTCGGTG TTG CGCCGGCCG TTCGTGTCGCAGCAG TERM 233 528098 - 528148 + g 71 -12.4 -3.2614 | CCGTTCGTGTCGCAG CAGCCGCTGGGGTGGGCGAAGC CGTCGGA GCCATGCCTGCCCCGGCTGCTG TTGGTGTCGGAGGTG TERM 234 528348 - 528376 + r 73 -11.8 -3.30124 | opp_overlap 528352, overlap 528349 528352 CTCGGTGGCCACCGG AGAATCCCGACT TCGTC AGTCGGGATTCA TTCTGCGCGATCGGA TERM 235 528349 - 528375 + r 74 -15.3 -2.57931 | opp_overlap 528352, overlap 528348 528352 TCGGTGGCCACCGGA GAATCCCGACT TCGTC AGTCGGGATTC ATTCTGCGCGATCGG TERM 236 528352 - 528372 + r 72 -11.2 -3.44325 | opp_overlap 528352, overlap 528349 528348 GTGGCCACCGGAGAA TCCCGACT TCGTC AGTCGGGA TTCATTCTGCGCGAT TERM 237 528372 - 528352 - R 70 -11.2 -3.32844 | opp_overlap 528352 528349 528348 GTGGCCACCGGAGAA TCCCGACT TCGTC AGTCGGGA TTCATTCTGCGCGAT trd_A0535 528572 - 528426 - | hypothetical protein trd_A0536 528837 - 529649 + | transcriptional regulator, IclR family TERM 238 529991 - 530005 + G 72 -3.5 -4.59511 | overlap 530002 CCTTTCGCGTGGTGT GAGTG CCGGC CGCTC TTTTTGCGAGCTGTT trd_A0537 529719 - 530468 + | protein of unknown function DUF59 trd_A0538 530465 - 531499 + | amidohydrolase 2 TERM 239 531524 - 531557 + F 90 -18.9 -2.78384 | overlap 531527 GGGCAAGGTGGAAGG CGAGCTGGCTGCGCA GCAC TGCGCGGCCAGCTCA TGTAGTGAGAGGAGG TERM 240 531527 - 531554 + F 90 -19.2 -2.66316 | overlap 531524 CAAGGTGGAAGGCGA GCTGGCTGCGCA GCAC TGCGCGGCCAGC TCATGTAGTGAGAGG trd_A0539 531580 - 532623 + | alcohol dehydrogenase (ADH) TERM 241 532687 - 532651 - f 85 -12.3 -4.07568 | opp_overlap 532655 532658, overlap 532652 532655 CGCGTGGTGGGAAAA GCAAGAACCCCTGAGGA TGT CCCTCGGGGGTTCTTAT CGTGGTAGCGGGGGT TERM 242 532686 - 532652 - f 82 -15.8 -3.04398 | opp_overlap 532655 532658, overlap 532651 532655 GCGTGGTGGGAAAAG CAAGAACCCCTGAGGA TGT CCCTCGGGGGTTCTTA TCGTGGTAGCGGGGG TERM 243 532655 - 532683 + F 91 -16.8 -3.44051 | opp_overlap 532655 532652 532651, overlap 532658 TGGTGGGAAAAGCAA GAACCCCTGAGG ATGTC CCTCGGGGGTTC TTATCGTGGTAGCGG TERM 244 532683 - 532655 - f 87 -15.3 -3.66908 | opp_overlap 532655 532658, overlap 532652 532651 TGGTGGGAAAAGCAA GAACCCCTGAGGA TGT CCCTCGGGGGTTC TTATCGTGGTAGCGG TERM 245 532658 - 532680 + F 86 -12.7 -3.85864 | opp_overlap 532655 532652 532651, overlap 532655 TGGGAAAAGCAAGAA CCCCTGAGG ATGTC CCTCGGGGG TTCTTATCGTGGTAG trd_A0540 532881 - 533003 + | hypothetical protein trd_A0541 533326 - 533159 - | hypothetical protein TERM 246 533448 - 533464 + r 74 -5.1 -4.48221 | GGGCCCGATCAGCCT GTTATCC CCG GGGTAGC TTTTATCCGTTGATC TERM 247 535659 - 535699 + r 71 -10.4 -3.62096 | gap 2 ACAGGCCGTCCAACC CCGTCGCCGCTTCCGGACGG CAG CCCTCTGG--GCGACGACGG TTTGGGCTCCTCCCG TERM 248 537867 - 537834 - R 73 -12.5 -3.34043 | gap 1, overlap 537835 CCGATCACTCCAGAA CCCGAGATCGTCGTGC CCT GCACGA-GACCTCGGT CCGTCGTCAACACCT TERM 249 537866 - 537835 - R 77 -16 -2.60212 | gap 1, overlap 537834 CGATCACTCCAGAAC CCGAGATCGTCGTGC CCT GCACGA-GACCTCGG TCCGTCGTCAACACC trd_A0542 538706 - 538092 - | isochorismatase hydrolase TERM 250 539661 - 539676 + G 85 -4.6 -5.02074 | overlap 539662 CGGGGAACCTGGCCA CCGAGC GACT GCTCGA TTTTTTGGAGGCTCG trd_A0543 538904 - 539809 + | hydroxymethylglutaryl-CoA lyase, (HMG-CoA lyase) (HL) (3-hydroxy-3-methylglutarate-CoA lyase) trd_A0544 539851 - 540255 + | ppox class probable f420-dependent enzyme, family trd_A0545 541240 - 540317 - | UspA domain protein TERM 251 540426 - 540368 - G 77 -10.9 -3.75024 | gap 2, overlap 540369 GGGCACGATGAACAA CGGAACGCGGGTTGC-CGTCAG-GAGCCG CTC CGTCACGCTGCCGAGCAGCCAGCGTTCCA GTCCCCCCTTTCCGC trd_A0546 541368 - 542492 + | formamidase (Formamide amidohydrolase) TERM 252 542562 - 542528 - T 95 -16.5 -4.15044 | opp_overlap 542519 GCTGCCGGGAAGAAA GCGGAAGGGCCGG GCTTCTCCT CCGACCCTTCCGC TCTCCGAGCCTGTCG trd_A0547 543017 - 542586 - | peroxiredoxin OsmC (Osmotically-inducible protein C) cofE 543844 - 543092 - | F420-0:gamma-glutamyl ligase trd_A0549 544261 - 543848 - | pyridoxamine 5'-phosphate oxidase-related, FMN-binding trd_A0550 544410 - 545288 + | alpha/beta hydrolase fold protein trd_A0551 545266 - 545394 + | hypothetical protein trd_A0552 545422 - 545736 + | thioredoxin peroxidase TERM 253 545794 - 545782 - T 78 -3.3 -4.94902 | opp_overlap 545782 545787, overlap 545783 GAAGGATGAGAAAAA CGGTC GCC GACCC TCTGCTCGTTCAGGC trd_A0553 545998 - 545804 - | putative glycosyl transferase trd_A0554 546850 - 546023 - | xylose isomerase domain protein TIM barrel TERM 254 547120 - 547094 - g 72 -13.1 -3.08679 | gap 1, opp_overlap 547091 547089 CTTTCCGAGTCAACA GCCACCGA-GGT GCCG ACCGTCGGTGGC TCGCGTTTGCGATGC trd_A0555 546913 - 547284 + | hypothetical protein trd_A0556 547743 - 547600 - | hypothetical protein trd_A0557 547715 - 547969 + | protein-L-isoaspartate o-methyltransferase 1 trd_A0558 547966 - 548235 + | protein of unknown function DUF92 transmembrane trd_A0560 548251 - 548799 + | membrane protein trd_A0559 549524 - 548760 - | chlorite dismutase superfamily trd_A0561 552438 - 549775 - | peptidase M16 domain protein acnA 555277 - 552494 - | aconitate hydratase 1 trd_A0563 556806 - 555700 - | xanthine dehydrogenase accessory factor, putative subfamily, putative TERM 255 556666 - 556632 - G 87 -18.6 -2.72436 | overlap 556629 556628 556623 CGAGAACGAAAGGTA CCCCGCGCTGGCGG AGATCAG CCGCCAGCGCGAAG AGGTCACGTGACAGT TERM 256 556789 - 556745 - G 95 -15.7 -3.95073 | overlap 556746 TCGGACATCGAGAAA GGGCGCAGCGATCCAGCCC CCGCGAC GGACCGGATCGCTGCGCTG CGCTCACTCCGCCAC TERM 257 556788 - 556746 - G 93 -19.2 -2.96722 | overlap 556745 CGGACATCGAGAAAG GGCGCAGCGATCCAGCCC CCGCGAC GGACCGGATCGCTGCGCT GCGCTCACTCCGCCA trd_A0564 559138 - 556793 - | carbon-monoxide dehydrogenase, large subunit trd_A0565 559642 - 559142 - | [2Fe-2S] binding domain protein trd_A0566 560530 - 559655 - | nicotine dehydrogenase chain A TERM 258 559946 - 559931 - G 100 -11.8 -4.59773 | opp_overlap 559930 559941 559941 GTCCAGCGCCAAAAA CGCCGC GGCA GCGGCG ATTGCGTAGTCGCCG TERM 259 560710 - 560750 + r 93 -19.1 -3.09289 | opp_overlap 560711 GTCTCCTGGAGAGGA ACCCTCCGATCGGAGGG TGTTCGC CCTTCCGATCGGAGGGG TGTCTTGGCATGCTG TERM 260 560749 - 560711 - R 100 -21.2 -3.25823 | gap 1, opp_overlap 560710 TCTCCTGGAGAGGAA CCCTCCGATCGG-AGGG TGTTCG CCCTTCCGATCGGAGGG GTGTCTTGGCATGCT trd_A0567 562819 - 560816 - | peptidase S9, prolyl oligopeptidase active site domain protein TERM 261 562344 - 562370 + g 77 -11.5 -3.71998 | overlap 562352 GCATCCCACACGCGC GCATCGTCGCG CCGCT CGCGGCGCTGC TTCTCTTCCTCGGTC trd_A0568 563458 - 562844 - | 4-diphosphocytidyl-2C-methyl-D-erythritol synthase trd_A0569 564096 - 563455 - | two-component response regulator trd_A0570 565340 - 564093 - | two-component sensor histidine kinase trd_A0571 565333 - 565494 + | hypothetical protein trd_A0572 565461 - 566606 + | hypothetical protein trd_A0573 566627 - 567727 + | dipeptidase trd_A0574 570006 - 567736 - | ggdef domain protein TERM 262 567895 - 567885 - G 75 -6.8 -4.43208 | AGATCGTCAAAGAAA CGAC CTC GTCG CGCACCTGGAACGAT trd_A0575 571399 - 570116 - | major facilitator superfamily MFS_1 trd_A0576 571490 - 571942 + | integral membrane protein trd_A0577 572635 - 572468 - | hypothetical protein trd_A0578 572751 - 572981 + | hypothetical protein trd_A0579 573004 - 573321 + | hypothetical protein trd_A0580 574307 - 573465 - | DegV family protein trd_A0581 574955 - 574314 - | membrane protein TERM 263 576372 - 576328 - g 100 -10.3 -5.06414 | gap 3 CGCGCTGAAGAAAAA CTGGTCGATCTTCTGACACGTC TACG GACA-GTC-G-AGATCGACCAG GAGGGTACGTCCGCG trd_A0582 575050 - 576633 + | Dak phosphatase trd_A0583 577241 - 576876 - | hypothetical protein trd_A0584 577216 - 577386 + | hypothetical protein trd_A0585 578017 - 577727 - | hypothetical protein TERM 264 577942 - 577963 + g 74 -13 -3.29511 | opp_overlap 577942 CCCGCGGGGACGAGA CGAGCGGC CAACAC GCCGCTCG TTCTCGAGCCATCAC trd_A0586 578169 - 578038 - | hypothetical protein trd_A0587 579186 - 578251 - | hypothetical protein TERM 265 578362 - 578333 - G 79 -10 -4.1552 | gap 1 TACCGGTGCAACAAA GCGAGTCCGATCG CTGCT CGG-CGGACTCGC TCCCGCCCCAATTGG trd_A0588 579753 - 579208 - | ribose transport system permease protein RbsC trd_A0589 580197 - 579763 - | ABC transporter, carbohydrate uptake transporter-2 (CUT2) family, permease protein trd_A0590 581116 - 580280 - | metal-dependent hydrolase trd_A0591 582281 - 581127 - | galactonate dehydratase TERM 266 581207 - 581181 - G 84 -6.4 -4.80396 | opp_overlap 581184, overlap 581183 581184 GAAAAGATTGAAAAA GACGCGCCGC CGCGGAT GCTGCGCGAC CACGCTGTGATCCAA TERM 267 581205 - 581183 - G 70 -7.6 -3.9951 | opp_overlap 581184, overlap 581181 581184 AAAGATTGAAAAAGA CGCGCCGC CGCGGAT GCTGCGCG ACCACGCTGTGATCC trd_A0592 583805 - 582300 - | ribose import ATP-binding protein RbsA 1 TERM 268 582763 - 582782 + g 72 -2.8 -4.71223 | gap 1, opp_overlap 582763 TCCCGAACGGACAGA CTGG-AGAC GAG GCCTTCCAG TTTTCTGTCTTCTGG TERM 269 583826 - 583858 + r 81 -13.3 -3.58269 | opp_overlap 583830, overlap 583830 GCCCCCTGCCTTCGG GAAAGGGGCCGGGAG AGC CCCCCGGCCCCTTCG TTTGAGCGTCACTTC TERM 270 583854 - 583830 - R 100 -20.7 -3.53012 | opp_overlap 583830 583826 CCTGCCTTCGGGAAA GGGGCCGGGAG AGC CCCCCGGCCCC TTCGTTTGAGCGTCA TERM 271 583830 - 583854 + r 93 -18.5 -3.52204 | opp_overlap 583830, overlap 583826 CCTGCCTTCGGGAAA GGGGCCGGGAG AGC CCCCCGGCCCC TTCGTTTGAGCGTCA trd_A0593 584940 - 583867 - | periplasmic binding protein/LacI transcriptional regulator trd_A0594 585937 - 585101 - | IclR-family transcriptional regulator trd_A0595 586235 - 586098 - | hypothetical protein trd_A0596 586344 - 586976 + | mucin, putative trd_A0597 588284 - 586989 - | metal dependent phosphohydrolase trd_A0598 588359 - 589279 + | proline dehydrogenase trd_A0599 589483 - 590925 + | lpxtg-motif cell wall anchor domain protein trd_A0600 591794 - 591585 - | hypothetical protein trd_A0601 591927 - 592817 + | hypothetical protein trd_A0602 593040 - 594080 + | cobalt transport protein CbiM cbiQ 594096 - 594917 + | cobalt ABC transporter, permease protein CbiQ TERM 272 595382 - 595364 - g 72 -6.7 -4.30719 | gap 1, overlap 595365 595366 GGTGGGGAGAAGAAA CGCGTCGC CCTG GCGACG-G TGCTCGTGATGGAGC trd_A0604 594923 - 595732 + | cobalt import ATP-binding protein CbiO 2 TERM 273 595776 - 595734 - T 93 -19.2 -3.10894 | gap 1, overlap 595738 595739 ACGATCACGACTGAA CGAATCGGGCCGGACTCCC TTTTTC GGGAGACCGGCCCG-CTCG ACGTCGAGAGATCGT TERM 274 595773 - 595738 - T 93 -17.5 -3.38316 | overlap 595734 595739 TCACGACTGAACGAA TCGGGCCGGACTCCC TTTTTC GGGAGACCGGCCCGC TCGACGTCGAGAGAT TERM 275 595772 - 595739 - T 100 -21 -2.62668 | overlap 595738 595734 CACGACTGAACGAAT CGGGCCGGACTCCC TTTTTC GGGAGACCGGCCCG CTCGACGTCGAGAGA trd_A0605 596801 - 595797 - | RNA polymerase sigma factor RpoD (Sigma-A) (Sigma-43) TERM 276 596829 - 596856 + r 75 -12 -3.54543 | gap 1 CCTCCGTTGTTCGGA CG-CGTCGTACGG ACA CCGCACGACGACG TTTCGAAACCTACAT trd_A0606 598061 - 596904 - | trypsin domain protein trd_A0607 599618 - 598179 - | sensor protein CutS trd_A0608 600302 - 599625 - | response regulator trd_A0609 600453 - 601259 + | YceI family protein TERM 277 601382 - 601417 + G 88 -17.7 -3.14587 | gap 2, overlap 601380 601378 CCCACCTCCTCTCTC GGGCCGGGGTCGACGGT CACC ACCG-C-ACCCCGGCCC TCTCCTTTTCTCCAG TERM 278 602066 - 602093 + G 72 -11.2 -3.53012 | gap 1 AAGTGGGGCAACGGT GCGCGCCCCGACG ATC CGCTGGGGC-CGC TTTACGCGCAAGCAG trd_A0610 601256 - 602374 + | probable peptidase trd_A0611 602420 - 603073 + | RNA polymerase sigma-H factor (Sigma-30) trd_A0612 603070 - 603828 + | putative transmembrane anti-sigma factor trd_A0613 604933 - 603830 - | peptidase M29 aminopeptidase II trd_A0614 605138 - 605001 - | hypothetical protein TERM 279 605540 - 605562 + G 75 -3.2 -4.7254 | overlap 605549 GGATAGTGCGCGTCA GTGCGCGGGC GGC GATCGAGCGC TTTTTCCTCGGAGCT trd_A0615 605191 - 606831 + | hypothetical protein trd_A0616 606944 - 607375 + | hypothetical protein trd_A0617 607372 - 607782 + | TadE family protein trd_A0618 607793 - 609115 + | hypothetical protein trd_A0619 609679 - 609371 - | GYD domain superfamily trd_A0620 610351 - 609695 - | O-methyltransferase trd_A0621 610453 - 611811 + | major facilitator superfamily MFS_1 pyrD 613008 - 611884 - | dihydroorotate oxidase trd_A0623 613053 - 613427 + | hypothetical protein trd_A0624 614278 - 613565 - | HAD-superfamily hydrolase, subfamily IA, variant 3 trd_A0625 615743 - 614283 - | hypothetical protein trd_A0626 616201 - 615776 - | protein archease (protein zbtb8os) (zinc finger and btb domain-containing opposite strand protein 8) TERM 280 615993 - 615971 - G 87 -6.3 -5.03145 | gap 1, overlap 615973 615975 GAAGTCGCGAAAAAA CATACCGTGG AGAT CCACGGCA-G CCAGTACAGCGTTCA TERM 281 615992 - 615973 - G 79 -10 -4.13963 | overlap 615971 615975 AGTCGCGAAAAAACA TACCGTGG AGAT CCACGGCA GCCAGTACAGCGTTC TERM 282 615990 - 615975 - G 71 -10.4 -3.66166 | overlap 615973 615971 TCGCGAAAAAACATA CCGTGG AGAT CCACGG CAGCCAGTACAGCGT trd_A0627 616768 - 618318 + | hypothetical protein trd_A0628 621245 - 618327 - | formate dehydrogenase TERM 283 619961 - 619944 - G 71 -9.9 -3.81414 | ATGCGGAAGCAAGAA GCTCATC TCGT GATGAGC CAACGGATACTCCTT TERM 284 620898 - 620930 + g 73 -14.9 -2.52516 | opp_overlap 620909, overlap 620867 620897 620900 CCCGACCCGGCGCAG CGGGTAGAGGATCCG TTC CGGATCCTTGACCTG GTTGATGGTGGCAGG TERM 285 620900 - 620928 + g 73 -13.9 -2.80016 | opp_overlap 620909, overlap 620867 620898 620897 CGACCCGGCGCAGCG GGTAGAGGATCCG TTC CGGATCCTTGACC TGGTTGATGGTGGCA trd_A0629 622788 - 621256 - | 4Fe-4S ferredoxin iron-sulfur binding domain protein TERM 286 621756 - 621710 - G 70 -2 -4.68724 | gap 1, overlap 621712 TGACCGAAGAGAAAA GCCGTGTAACCCGCCGCCGCG ATCCCG CCCGGCAGCGCGAGCCA-GGC GAGCAGGCGCTCGAT trd_A0630 623078 - 622800 - | hypothetical protein trd_A0632 623047 - 623271 + | hypothetical protein trd_A0631 623369 - 623244 - | hypothetical protein trd_A0633 623706 - 623506 - | hypothetical protein trd_A0634 623691 - 625022 + | branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein, putative TERM 287 625039 - 625072 + FH 100 -21.8 -3.27022 | gap 1, opp_overlap 625026, overlap 625040 AAGCTCGAGCGAGTC G-GCGCCGGGTCGGG CTCAT CCCGACCCGGCGCTC TTCCTATAAGCTGAA TERM 288 625040 - 625070 + FH 100 -25.5 -3.20078 | opp_overlap 625026, overlap 625039 AGCTCGAGCGAGTCG GCGCCGGGTCGGG CTCAT CCCGACCCGGCGC TCTTCCTATAAGCTG TERM 289 625369 - 625396 + G 71 -9.2 -3.72027 | gap 1, overlap 625354 TTTCGCACACGGCGA GGTCTTCATGAGC GGT GC-CATGACGACC TTCTTCCTCGCCGAT trd_A0635 625106 - 626176 + | inner-membrane translocator TERM 290 627512 - 627538 + G 80 -13.7 -3.3903 | overlap 627513 CCTCTTTCGGTGGAC TGAGCGGCGCG CTCTT CGCGTCGCTCG TTGGTTCGGTCGTTC TERM 291 627513 - 627537 + G 74 -15 -2.62936 | overlap 627512 CTCTTTCGGTGGACT GAGCGGCGCG CTCTT CGCGTCGCTC GTTGGTTCGGTCGTT trd_A0636 626173 - 627846 + | leucine/isoleucine/valine transporter permease subunit trd_A0637 627859 - 628686 + | branched-chain amino acid transport ATP-binding protein LivG trd_A0638 628673 - 629386 + | high-affinity branched-chain amino acid transport ATP-binding proteinlivF (LIV-I protein F) trd_A0639 630322 - 629390 - | tartronate semialdehyde reductase trd_A0640 631519 - 630857 - | peptidase C60 sortase A and B trd_A0641 634222 - 631523 - | hypothetical protein trd_A0642 635579 - 634308 - | flagellar hook protein FlgE flgD 636112 - 635672 - | flagellar hook capping protein trd_A0644 637547 - 636144 - | putative MotD chemotaxis protein flgB 637989 - 637573 - | flagellar basal-body rod protein FlgB trd_A0646 638983 - 638000 - | lytic transglycosylase, catalytic fliJ 639470 - 639003 - | flagellar export protein FliJ fliI 640837 - 639485 - | flagellar protein export ATPase FliI trd_A0649 641522 - 640827 - | type III secretion system protein fliG 642549 - 641515 - | flagellar motor switch protein FliG fliF 644149 - 642557 - | flagellar M-ring protein FliF fliE 644475 - 644176 - | flagellar hook-basal body complex protein FliE flgC 644961 - 644506 - | flagellar basal-body rod protein FlgC trd_A0654 645629 - 645324 - | hypothetical protein trd_A0655 646149 - 645649 - | hypothetical protein TERM 292 646196 - 646139 - G 70 -14.1 -2.51464 | gap 1, overlap 646138 GCACGACCGAGTAAT GGT-ATCGCCAACCGGATCGCTACCAGC GTC GCCGAACGCGACCCGCTGGGCGATCACC TCCAGCCGGATCCGG trd_A0656 646403 - 646158 - | hypothetical protein trd_A0657 646818 - 648080 + | thermostable carboxypeptidase 1 trd_A0658 648096 - 649379 + | glucose sorbosone dehydrogenase trd_A0659 650476 - 649544 - | protein of unknown function DUF6, transmembrane TERM 293 650188 - 650173 - G 84 -6.8 -4.82901 | gap 1, opp_overlap 650171 650173 TCGTGTTCAGAAAAA GCG-CGC TGT GCGTCGC TGTTGTATGGTGCAT trd_A0660 650518 - 650994 + | hypothetical protein TERM 294 651720 - 651732 + G 81 -3.3 -5.0133 | CGAACTCGGGACTGT GGCCA ACC TCGCC TTTTTTAGCCGGCTC TERM 295 652159 - 652183 + G 71 -12.8 -3.01791 | opp_overlap 652154, overlap 652161 CTGGAAGCGATCGGA GAGCGCCGCG GCCCG CTCGGCGCTC TCTTGGCCGAAGGCT trd_A0661 650998 - 652806 + | tungsten-containing aldehyde ferredoxin oxidoreductase trd_A0662 652810 - 653163 + | hypothetical protein trd_A0663 653628 - 653170 - | endoribonuclease L-PSP trd_A0664 653979 - 654632 + | protein DedA (Protein DSG-1) TERM 296 656105 - 656095 - g 82 -6.8 -4.70659 | overlap 656096 TGGGATACCGAAAAA TGCC GAC GGCA CTGCCCCGACTACGG trd_A0665 654835 - 656184 + | glutamine synthetase (Glutamate--ammonia ligase) (GS) TERM 297 656336 - 656366 + G 78 -7.5 -4.37092 | gap 1, overlap 656323 TGCGTCGCACCTTAC CGGGTGCCG-GCGT CTAT GCGCGCGACACTCG TTTTCTCAGCGAACT trd_A0666 656248 - 658488 + | amylo-alpha-1,6-glucosidase trd_A0668 658492 - 659163 + | hypothetical protein trd_A0667 659393 - 659136 - | hypothetical protein trd_A0669 659836 - 660741 + | amidohydrolase family protein TERM 298 661134 - 661165 + F 100 -15.3 -4.66833 | gap 1, overlap 661126 CCGCTGCGGCTGATA GCCTCTGCTCGACC AGTCC GGTC-AGCAGAGGC TTTTTGACGTTAGGA trd_A0670 661188 - 662177 + | hypothetical protein trd_A0671 662188 - 662625 + | phycocyanin alpha phycocyanobilin lyase trd_A0672 662597 - 663601 + | ATPase associated with various cellular activities, AAA_3 trd_A0673 663604 - 664842 + | conserved repeat domain protein trd_A0674 664826 - 666235 + | hypothetical protein trd_A0675 667433 - 666240 - | methionine gamma-lyase (L-methioninase) trd_A0676 667526 - 668569 + | luciferase family protein TERM 299 668789 - 668748 - T 70 -11.5 -3.31263 | gap 1, overlap 668751 AGCTGATCGTCACAA TGAGCGACCCCCGCCGG-GT CTC ACTCCCGCGGGGGTCGGCGA CGACTGTCCGCGTGC TERM 300 668786 - 668751 - T 80 -15.4 -2.83271 | gap 1, overlap 668748 TGATCGTCACAATGA GCGACCCCCGCCGG-GT CTC ACTCCCGCGGGGGTCGG CGACGACTGTCCGCG trd_A0677 669004 - 668807 - | hypothetical protein trd_A0678 669635 - 669504 - | hypothetical protein trd_A0679 669774 - 670979 + | hypothetical protein trd_A0680 671503 - 671039 - | binding-protein-dependent transport systems inner membrane component trd_A0681 672586 - 671738 - | NAD-dependent deacetylase 1 (Regulatory protein SIR2homolog 1) thiO 672761 - 673999 + | glycine oxidase ThiO trd_A0683 674281 - 674009 - | hypothetical protein TERM 301 674206 - 674156 - G 71 -12.5 -3.25942 | overlap 674181 AGCGCCGGACAGGAA CGCCCCGGC-GGCCACACCGACCAG ACT CTGGCCGA-GCGACCAGCTGCGGCG CAGCGTCGCCAGCCG trd_A0684 674487 - 674287 - | hypothetical protein trd_A0685 674858 - 674556 - | hypothetical protein trd_A0686 675583 - 675236 - | hypothetical protein trd_A0687 676336 - 676019 - | hypothetical protein trd_A0688 677016 - 676705 - | hypothetical protein trd_A0689 678045 - 677026 - | Tat (twin-arginine translocation) pathway signal sequence domain protein trd_A0690 678919 - 678170 - | transcriptional regulator, LuxR family protein trd_A0691 680299 - 679025 - | major facilitator superfamily MFS_1 trd_A0692 682428 - 680371 - | peptidase families S8 and S53 domain protein upp 683171 - 682467 - | uracil phosphoribosyltransferase trd_A0694 683170 - 683283 + | hypothetical protein TERM 302 683851 - 683867 + G 71 -9.4 -3.74224 | overlap 683863 683864 AGCGCTGCCATGAGT CTCGCG CGCGC CGCGAG TTTCGCTCGTTTCGC TERM 303 683987 - 683974 - g 79 -2.3 -4.9792 | opp_overlap 683975, overlap 683975 CAGGCCAGAGAAAAA GCGCT GCCG AGCGT GCGTCTCGTCGAGGA TERM 304 684381 - 684419 + G 71 -10.3 -3.57263 | gap 2, overlap 684405 CACTGCCGCCCTGAC CGAGGCGTGG-GGCGA-GG ACG CCATCGCGGCCACGCATCG TTTCGCGCTGGCCCT trd_A0695 683482 - 684480 + | hypothetical protein TERM 305 685508 - 685496 - g 82 -6.2 -4.8048 | CTGGTAGACGAAAAA CGGC TCTCC GCCG TGCCGCTCGAGCAGC trd_A0696 684473 - 687922 + | hypothetical protein trd_A0697 687912 - 688526 + | hypothetical protein trd_A0698 688730 - 688617 - | hypothetical protein TERM 306 689412 - 689397 - gH 71 -10.4 -3.62224 | opp_overlap 689390 689390 AGACTTCTCGAAGAA CCCGGT CGGT ACCGGG CCCTTCCGTTTCGTC trd_A0699 688729 - 690402 + | heme-binding protein A (Hemin-binding lipoprotein) trd_A0700 690513 - 691457 + | oligopeptide transport system permease protein AppB trd_A0701 691470 - 692363 + | oligopeptide ABC transporter permease protein TERM 307 692907 - 692872 - g 93 -16.8 -3.90744 | overlap 692873 692898 CGGCGTGGGAAACAA TCCGCTGCGCTCCTCG TCGT CAAGGAGCGCGGCGGC TACGGCGGCTACACC TERM 308 692906 - 692873 - g 100 -20.3 -2.94232 | overlap 692872 692898 GGCGTGGGAAACAAT CCGCTGCGCTCCTCG TCGT CAAGGAGCGCGGCGG CTACGGCGGCTACAC trd_A0702 692380 - 693282 + | major pilin protein FimA trd_A0703 693496 - 693377 - | hypothetical protein trd_A0704 693586 - 694776 + | ABC-type dipeptide/oligopeptide/nickel transport systems, periplasmic components trd_A0705 694881 - 696164 + | oxidoreductase, streptomycin biosynthesis protein TERM 309 696967 - 696985 + G 72 -11.7 -3.45849 | CTGCTCGACGATCTC GAGCGGC GTCGG GCCGCTC TTATCCTGATCTCCG trd_A0706 696145 - 697182 + | glucosamine--fructose-6-phosphate aminotransferase (isomerizing) nagA 697193 - 698416 + | N-acetylglucosamine-6-phosphate deacetylase trd_A0708 698413 - 699528 + | beta-lactamase anmK 699531 - 700784 + | anhydro-N-acetylmuramic acid kinase trd_A0710 700781 - 701089 + | hypothetical protein trd_A0711 701228 - 702910 + | glycoside hydrolase family 20 trd_A0712 703904 - 702978 - | ATPase BadF/BadG/BcrA/BcrD type murQ 704811 - 703894 - | N-acetylmuramic acid 6-phosphate etherase TERM 310 704867 - 704851 - R 74 -2.2 -4.81249 | gap 1, overlap 704852 GCCGAAAGTGAAAAA CCCG-GC AATC GCTCGGA CTGGTCGACCCCTGC TERM 311 705066 - 705022 - R 70 -13.7 -2.65264 | gap 3, overlap 705057 CCATCACCCAGACCA CCCGCCTCGC-CG-TACCGAGC ATGA GC-CGGCAACGAGCGAAGCGGG GAATCGCTCGCCTCG trd_A0714 705274 - 705089 - | hypothetical protein trd_A0715 705352 - 706683 + | enolase superfamily member 1 trd_A0716 708059 - 707073 - | hypothetical protein TERM 312 708298 - 708250 - H 70 -13.8 -2.52464 | CGCCGCGTCAACCGA CCGCCGTCTGCCGG-CGCATGCCC CGG GAGCAGGCGGCCGGC-GCCAACGG CACCGGCGCGACTCG trd_A0717 709026 - 709199 + | hypothetical protein trd_A0718 709583 - 709428 - | hypothetical protein trd_A0719 712267 - 709748 - | ATP-dependent helicase TERM 313 711079 - 711061 - G 71 -8 -4.10164 | overlap 711062 CGAGCAGGATACAAA GGCCGGGG CGG CTCCGACC CGCGCGGCCGAGGCG trd_A0720 713194 - 712841 - | hypothetical protein trd_A0721 713555 - 713373 - | SpoVT / AbrB like domain, putative trd_A0722 714430 - 713687 - | hypothetical protein trd_A0723 714928 - 714536 - | ATPase TERM 314 714568 - 714625 + g 73 -12.1 -3.34895 | gap 3, opp_overlap 714551 714542 714600 CGTCCGCCGCCTCGC GAGCCGCCGCGCGATCGAT-CG-AGCGG AACAA CCGATGCGCACCGATCGC-CGGCGTCTC TTCCTTCAAGGTCGG trd_A0724 715059 - 714916 - | hypothetical protein trd_A0725 715420 - 715013 - | ATPase TERM 315 715688 - 715715 + r 89 -13.4 -4.07568 | GACCGCCGGTGTTGG CGTGCCGCACTG GCGC CGGTGCCGCACG TTTTCGACCAACGCC trd_A0726 715883 - 715731 - | hypothetical protein trd_A0727 717223 - 715955 - | hypothetical protein trd_A0728 719117 - 718074 - | peptidase M23B trd_A0729 720757 - 719114 - | drug resistance MFS transporter, drug:H+ antiporter-1 (14 Spanner) (DHA2) family TERM 316 719311 - 719271 - G 76 -6.1 -4.49311 | overlap 719272 719275 AGGATCAGGAGAAAA GCCACGCTCAGCGC-CTCG GCCAG CGCGCGCTCCGAGC-TGGC ACGCAGCGCGTCGCT trd_A0730 720835 - 722409 + | WD40 domain protein beta Propeller trd_A0731 722628 - 722485 - | hypothetical protein trd_A0732 722619 - 722936 + | NmrA family protein trd_A0733 723144 - 723395 + | hypothetical protein trd_A0734 723721 - 724014 + | hypothetical protein trd_A0735 724333 - 725565 + | diguanylate phosphodiesterase trd_A0737 725566 - 726813 + | diguanylate phosphodiesterase trd_A0736 727688 - 726810 - | haloalkane dehalogenase 1 trd_A0738 727832 - 728314 + | nitrilotriacetate monooxygenase component B (NTAmonooxygenase component B) (NTA-MO B) TERM 317 728474 - 728458 - f 70 -5.1 -4.33675 | AGTACACTATGAAAA GAGGC CTGGTTT GCCTC GGGAGCGAACGATGC trd_A0739 728486 - 729130 + | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen trd_A0740 730291 - 729146 - | monomeric sarcosine oxidase (msox) trd_A0741 730817 - 730467 - | hypothetical protein trd_A0742 731260 - 730829 - | hypothetical protein trd_A0743 731986 - 731384 - | O-methyltransferase, family 3 TERM 318 732464 - 732497 + G 76 -2.3 -4.91109 | gap 1, overlap 732468 732475 GCAGCAGCCATCTGG GCGAACGGTTCGAGCC GCA GGCTCTATCTGAT-GC TTTTTCTCATCGGAG trd_A0744 732200 - 733465 + | arsenical pump membrane protein trd_A0745 735029 - 733470 - | type I phosphodiesterase/nucleotide pyrophosphatase TERM 319 734697 - 734682 - G 71 -7.5 -4.07568 | opp_overlap 734672 TCGCTCCGCTGAAAA GCGCG TTGCCT CGCGC ACCAACCCCTCAGCG trd_A0746 735145 - 735026 - | hypothetical protein trd_A0747 735308 - 735162 - | hypothetical protein trd_A0748 735309 - 736169 + | arginase/agmatinase/formiminoglutamase trd_A0749 736186 - 736560 + | hypothetical protein trd_A0750 736733 - 737317 + | transcription regulator, Lrp/AsnC family trd_A0752 737301 - 738623 + | glutamate-1-semialdehyde 2,1-aminomutase (GSA)(Glutamate-1-semialdehyde aminotransferase) (GSA-AT) trd_A0751 739387 - 738620 - | peptidase C60 sortase A and B TERM 320 739458 - 739421 - R 100 -19.9 -3.64703 | overlap 739443 739444 CGTCTGCGACCGAAA GCAGCGGGTGCCCTGAT CGAA ACCGGAGCACCCGCTGC GACGGGAGGGAGAGG trd_A0753 740294 - 739479 - | lipoprotein trd_A0754 740814 - 741818 + | alcohol dehydrogenase, propanol-preferring trd_A0755 742078 - 741917 - | hypothetical protein trd_A0756 742223 - 742387 + | hypothetical protein trd_A0757 742602 - 742718 + | hypothetical protein trd_A0758 742706 - 743047 + | hypothetical protein trd_A0759 743060 - 743500 + | hypothetical protein trd_A0760 743693 - 744040 + | hypothetical protein trd_A0761 744092 - 744301 + | hypothetical protein trd_A0762 744301 - 744477 + | hypothetical protein trd_A0763 745374 - 745141 - | hypothetical protein soj 745429 - 746211 + | SpoOJ regulator protein trd_A0765 746204 - 747190 + | stage 0 sporulation protein J trd_A0766 747415 - 748305 + | type I restriction enzyme r protein n terminus (hsdr_n) TERM 321 748467 - 748433 - T 100 -15.8 -4.7373 | overlap 748436 GCACTGCACCAAAAA CGA-GGCCGGCCCGCC GCACA GG-GGGCCGGCCATCG CGGAAGAGGGTAACG TERM 322 748463 - 748436 - T 89 -16.3 -3.28472 | gap 1, overlap 748433 CTGCACCAAAAACGA GGCCGGCCCGCC GCACA GG-GGGCCGGCC ATCGCGGAAGAGGGT trd_A0767 749091 - 748486 - | BioY protein trd_A0768 749914 - 749141 - | hypothetical protein trd_A0769 750910 - 749918 - | urea amidolyase trd_A0770 751936 - 750944 - | urea amidolyase TERM 323 751688 - 751659 - G 74 -10.1 -3.72576 | gap 1, opp_overlap 751654 751651 TGGTCCTCGACGAAA TCGATCAGATCGCG CAC CCCGATCTG-TCGA CTATCGTAGTTGATC trd_A0771 752216 - 751968 - | biotin carboxyl carrier protein of acetyl-coa carboxylase (bccp) trd_A0772 753243 - 752236 - | ribose transport system permease protein RbsC TERM 324 752378 - 752364 - G 81 -9.2 -4.32034 | GCATGACCAGGAAAA CGGCAC CCA GCGCCG CACCGAAGATATTCC trd_A0773 754762 - 753227 - | ribose import ATP-binding protein RbsA 1 trd_A0774 756058 - 754775 - | periplasmic binding protein/LacI transcriptional regulator trd_A0775 758524 - 756170 - | carbon monoxide dehydrogenase large chain (COdehydrogenase subunit L) (CO-DH L) TERM 325 757428 - 757379 - G 74 -11.4 -3.61715 | opp_overlap 757409, overlap 757381 757382 757425 GATCTCGTCGAAGAA CAGC-TCCCGCGCCGTCTGCGCGG CCGT CCA-GCCGACGGCGCGGAAAGCCC CGACCGGCGCCTTGT TERM 326 757426 - 757381 - G 88 -16.2 -3.38812 | opp_overlap 757409, overlap 757379 757382 757425 TCTCGTCGAAGAACA GC-TCCCGCGCCGTCTGCGCGG CCGT CCA-GCCGACGGCGCGGAAAGC CCCGACCGGCGCCTT TERM 327 757424 - 757382 - G 81 -16.3 -2.63073 | gap 1, opp_overlap 757409, overlap 757381 757379 CTCGTCGAAGAACAG CTCCCGCGCCGTCTGCGCGG CCGT CCA-GCCGACGGCGCGGAAA GCCCCGACCGGCGCC trd_A0776 759023 - 758538 - | carbon monoxide dehydrogenase small chain (COdehydrogenase subunit S) (CO-DH S) trd_A0777 759922 - 759044 - | carbon monoxide dehydrogenase medium chain (COdehydrogenase subunit M) (CO-DH M) TERM 328 760055 - 760078 + H 78 -10.3 -4.03078 | TGCTAGAGCCCAGAC GGTTCGCCT GTCAAG AGGCGAGCC TTTGTAATCTGATAC TERM 329 760574 - 760588 + G 71 -10 -3.62572 | opp_overlap 760561 GAGGCGCTCGCGTTC GCCGAT CGG ATCGGC TTTCCCCTGATGGTC accC 760136 - 761482 + | acetyl-CoA carboxylase, biotin carboxylase ppsA 762797 - 761715 - | phosphoenolpyruvate synthase trd_A0780 764646 - 762832 - | phosphoenolpyruvate synthase/pyruvate phosphate dikinase trd_A0781 765063 - 764830 - | hypothetical protein TERM 330 765148 - 765128 - H 77 -12.6 -3.62597 | opp_overlap 765130 GCGAGTCGGCAACAA GACGACGC CTCGC GCGTCGTC TCCCACTGCTCCGGC TERM 331 765969 - 765937 - g 73 -11.9 -3.36289 | opp_overlap 765958 CACTACCGGAAGGAA GTCGGCGTTCCGCTC GAG GAACGGATCGCCACC GGCCGGTTCCTCGAT trd_A0782 765208 - 766077 + | peptidase C60 sortase A and B trd_A0783 766058 - 766957 + | NADP oxidoreductase coenzyme f420-dependent panB 766954 - 767859 + | 3-methyl-2-oxobutanoate hydroxymethyltransferase panC 767834 - 768682 + | pantoate--beta-alanine ligase trd_A0786 768724 - 770373 + | serine/threonine-protein kinase PksC lgt 770435 - 771295 + | prolipoprotein diacylglyceryl transferase trd_A0788 773054 - 771300 - | long-chain-fatty-acid--CoA ligase (Long-chain acyl-CoAsynthetase) TERM 332 771476 - 771462 - G 72 -11.4 -3.48276 | TCGTTCGCGACAGAA CGCGAG CAG CTCGCG CGGCTCGACGCTCGC trd_A0789 774391 - 773222 - | hypothetical protein trd_A0790 774682 - 774506 - | hypothetical protein trd_A0791 774719 - 776356 + | thiamine pyrophosphate enzyme, central domain family TERM 333 776379 - 776412 + F 90 -16.1 -3.65314 | gap 1 CGACCAGCGCGCATC CGAGACGCCCTGGC AGGCGGA GCCAGGGCGTC-CG TTCTTCGGAATTGGC trd_A0792 776783 - 778189 + | glycine cleavage T protein trd_A0793 778205 - 779572 + | extracellular ligand-binding receptor TERM 334 779594 - 779628 + F 78 -15.7 -2.72471 | overlap 779594 779597 CTCTGCCAATCGTGT GGGCGAGGAGCCGGG AGATG CCTGGCTCCTCGTCG CTTCTCTCGTCCCGG TERM 335 779594 - 779629 + F 90 -15.5 -3.54475 | gap 1, overlap 779594 779597 CTCTGCCAATCGTGT G-GGCGAGGAGCCGGG AGATG CCTGGCTCCTCGTCGC TTCTCTCGTCCCGGC TERM 336 779597 - 779625 + F 86 -18.2 -2.64051 | overlap 779594 779594 TGCCAATCGTGTGGG CGAGGAGCCGGG AGATG CCTGGCTCCTCG TCGCTTCTCTCGTCC trd_A0794 780057 - 780215 + | hypothetical protein trd_A0795 780240 - 781817 + | amino acid permease-associated region, putative trd_A0796 781827 - 782816 + | metallophosphoesterase trd_A0798 782834 - 784642 + | nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase trd_A0797 785033 - 784605 - | protein ArsC (Arsenate reductase) (Arsenical pumpmodifier) (Low molecular weight protein-tyrosine-phosphatase) trd_A0799 785191 - 785571 + | DNA polymerase, beta domain protein region trd_A0800 785597 - 785926 + | hepn domain protein cofD 786360 - 787334 + | lppg:fo 2-phospho-l-lactate transferase trd_A0802 787334 - 787936 + | 2-phospho-L-lactate guanylyltransferase CofC TERM 337 787956 - 787969 + F 71 -4.5 -4.48987 | CCGAGAGCAGACTGT CACTC GATG GGGTG TTTTCGTTGTGGCAC trd_A0803 787978 - 788889 + | drug/metabolite transporter trd_A0804 788896 - 789573 + | F420-0:gamma-glutamyl ligase trd_A0805 789570 - 790385 + | nuclease trd_A0806 790497 - 792266 + | acetolactate synthase catalytic subunit trd_A0807 792358 - 792489 + | hypothetical protein trd_A0809 792548 - 794425 + | ABC-type transporter, ATPase component, fused to acetyltransferase domain trd_A0808 794832 - 794419 - | asch domain family TERM 338 795514 - 795557 + G 76 -13.9 -3.04792 | gap 2, overlap 795519 CTGGGTGGCGGTGTG CAGCGACGTCGCGCGCTCGAC CCCA GTCGAGCGC-CG-CGGCACTG TATTCGGCCTCCTGA TERM 339 795816 - 795828 + G 82 -4.1 -5.07652 | CAACGGTGTGGATGC TCAGT CTC GCTGA TTTTCTTTTCAAGCC trd_A0810 795083 - 796384 + | major facilitator superfamily MFS_1 trd_A0811 798027 - 796591 - | radical SAM domain protein TERM 340 797397 - 797374 - G 71 -10.2 -3.65314 | opp_overlap 797375, overlap 797388 CGGAATCGCGAAGAA GCGGCCCCGA TAGA CCGGGACCAC CGGACAATGGGCGCA TERM 341 797808 - 797831 + g 80 -12.4 -3.78775 | opp_overlap 797803 797805 TCGGGACAGAGATCG CGATCGCCCG CGCT CGCGCGATCG TTTCGTCGTCGAGAC TERM 342 799313 - 799323 + G 72 -8.2 -4.15044 | ACGGTCATGCTCGCA CCGC TCA GCGG TTTCTTCGCGACACC trd_A0812 798242 - 799453 + | aspartate aminotransferase trd_A0813 800666 - 799524 - | hypothetical protein trd_A0814 801670 - 800663 - | lipolytic enzyme, G-D-S-L trd_A0815 802791 - 801670 - | histidine triad TERM 343 803852 - 803829 - g 70 -7.4 -3.95584 | opp_overlap 803830, overlap 803830 TCGGCATCAAGGAAA GCCAGCTCCA GGGA TGGAACTGGT TCGTCAAGCGTACGA trd_A0816 802958 - 804442 + | undecaprenyl-phosphate glucose phosphotransferase trd_A0817 804708 - 804547 - | hypothetical protein trd_A0818 804702 - 804881 + | hypothetical protein trd_A0819 804954 - 806090 + | glycosyl transferase, group 1 trd_A0820 806081 - 806791 + | lipopolysaccharide biosynthesis protein, putative TERM 344 806850 - 806863 + G 70 -5.9 -4.30719 | overlap 806848 806846 CTGGCTGGCCTCGTG GCCGC CGCC GTGGC TTTCTTCTACAGCAG trd_A0821 806781 - 808127 + | capsular exopolysaccharide family trd_A0822 808995 - 808303 - | hypothetical protein trd_A0823 809407 - 808979 - | hypothetical protein trd_A0824 809844 - 809488 - | hypothetical protein trd_A0825 810118 - 809867 - | hypothetical protein TERM 345 810547 - 810512 - R 73 -12.6 -3.40403 | overlap 810514 GTTCTCCGAGCACAA CAGAGCCGTCCGGAAA GCAC CTCCCGAACGGCTCCA TCCCGTCACATCCAA TERM 346 810545 - 810514 - R 83 -15.2 -3.27475 | overlap 810512 TCTCCGAGCACAACA GAGCCGTCCGGAAA GCAC CTCCCGAACGGCTC CATCCCGTCACATCC TERM 347 810707 - 810725 + r 71 -7.4 -4.07568 | TCGGTGTCAGGCATT GCGCCA CTGTGGC TGGCGC TTTTCCAGGAAGGCG trd_A0826 811492 - 810698 - | short chain enoyl-CoA hydratase trd_A0827 813456 - 811537 - | O-acetylhomoserine (thiol)-lyase (O-acetylhomoserinesulfhydrylase) (OAH sulfhydrylase) (Homocysteine synthase) trd_A0828 815259 - 813577 - | AMP-dependent synthetase and ligase trd_A0829 816724 - 815354 - | major facilitator superfamily transporter trd_A0830 817578 - 817462 - | hypothetical protein trd_A0831 817991 - 818344 + | transcriptional regulator, ArsR family trd_A0832 818350 - 818544 + | type I antifreeze protein trd_A0833 818637 - 819038 + | domain of unknown function superfamily trd_A0834 819052 - 820446 + | metallo-beta-lactamase family protein trd_A0835 820580 - 820912 + | rhodanese domain protein TERM 348 820927 - 820960 + TF 100 -18.9 -3.27022 | opp_overlap 820917 AACGATCGTCGTGAA CGGAGCGGGGCGC TTCCCGCT GCGCCTCGCTCCG TTCGTCTGCGATCCA trd_A0836 822300 - 821086 - | putidaredoxin reductase TERM 349 822113 - 822134 + gF 72 -3 -4.63218 | gap 1, opp_overlap 822075 TAGAACGCGACCGGC CGGAAGAGT ATCTC GCTC-TCCG TTTTCTTCCCCAGGA trd_A0837 822289 - 822564 + | hypothetical protein trd_A0838 823241 - 822639 - | rieske trd_A0839 825096 - 823549 - | probable membrane sugar transferase TERM 350 824313 - 824268 - G 71 -7.4 -4.11216 | overlap 824294 CGCCGACTTCCAAAA GTGCCCGACGCCGCACCAGC AGATTA GCTGTGACGAGGTAGGGCAC CGCGCCGCGCGGTCG trd_A0840 826231 - 825134 - | radical SAM domain protein TERM 351 825798 - 825782 - G 78 -7.9 -4.41494 | overlap 825783 GATCTTGAACGAAAA GCCTCGC GCT GCGAGGA AATCCATCGCGCGTC trd_A0841 826487 - 826221 - | hypothetical protein TERM 352 826403 - 826392 - G 83 -5.8 -4.86621 | AGGCGGAATGAAAAA GAGC CGAC GCTC ATGATACGTATAGGC trd_A0842 826657 - 826496 - | hypothetical protein TERM 353 827576 - 827548 - g 82 -15.9 -3.14132 | opp_overlap 827568 CGGCGTCGGCATGAA CGCCGTCCAGGGC GCG GCCCTCGCCGGCG CCTCCAAGGTCATCG trd_A0843 826949 - 828064 + | S-(hydroxymethyl)glutathione dehydrogenase TERM 354 828131 - 828098 - f 90 -16.7 -3.31322 | opp_overlap 828101, overlap 828101 CGCAATTTGGCACAA CCAGCTCCACCGGGC AGTT GCCCGGTGGAGCTTC TCGCGCCGCACGATC TERM 355 828128 - 828101 - f 100 -22.8 -2.83119 | opp_overlap 828101, overlap 828098 AATTTGGCACAACCA GCTCCACCGGGC AGTT GCCCGGTGGAGC TTCTCGCGCCGCACG TERM 356 828101 - 828128 + F 100 -22.8 -3.28712 | opp_overlap 828101 828098 AATTTGGCACAACCA GCTCCACCGGGC AGTT GCCCGGTGGAGC TTCTCGCGCCGCACG TERM 357 828475 - 828495 + G 71 -4 -4.58395 | gap 2, overlap 828477 828478 CGAACGGGGAGTCAC GCTGGCGGAC AAC GTC-GCC-GC TTTTTCCGAACTCGG trd_A0844 828359 - 829588 + | FMN-dependent dehydrogenase trd_A0845 829906 - 829757 - | hypothetical protein trd_A0846 830136 - 829969 - | hypothetical protein TERM 358 830965 - 830931 - gR 70 -7.6 -3.9712 | CCAGGTCACCAGAAA GGCCGGACGAACCGTC ATC GTCGGCGCCTCTGGCC GAGGGATGGATCACA trd_A0847 830095 - 831213 + | S-(hydroxymethyl)glutathione dehydrogenase TERM 359 831291 - 831325 + Tr 100 -30.2 -3.53012 | GGTGACCCGGCCCTC GATCGGGGCGACTCGG AAT CCGAGTCGCCCCGATC TTTCCCCAGGGGCAG trd_A0848 832017 - 831871 - | hypothetical protein trd_A0849 832567 - 832346 - | blasticidin-S deaminase trd_A0850 832733 - 832572 - | blasticidin-S deaminase trd_A0851 833192 - 834496 + | peptide amidase dcd 834523 - 835038 + | deoxycytidine triphosphate deaminase trd_A0853 836145 - 835180 - | 2-keto-3-deoxygluconate kinase dehII 836822 - 836154 - | haloacid dehalogenase, type II TERM 360 837017 - 837052 + H 78 -3.8 -4.84359 | CTGGAAGTGCTGGCT CGAGGAGGGGCAGCGT GTGG AAGCAGGTCCTCGTCG TTTTTCTCGCCGTCG trd_A0855 837031 - 838755 + | hypothetical protein proC 839648 - 838761 - | pyrroline-5-carboxylate reductase TERM 361 838885 - 838861 - G 70 -13.6 -2.52543 | ACGGTCCGCAATCCA CCGCGCTCCA TCTCG TAGAGCGCGG CCGCAGACGTACCGC trd_A0857 840460 - 839660 - | creatinine amidohydrolase trd_A0859 840539 - 842365 + | glycosyl hydrolase, family 15 trd_A0858 842835 - 842362 - | hypothetical protein trd_A0860 842892 - 843236 + | hypothetical protein wbbL 844220 - 843240 - | glycosyl transferase, group 2 family protein TERM 362 843444 - 843482 + gT 90 -15.9 -3.74693 | overlap 843445 TTTCACATGGACAGC CCGCGCGGCTGGCTCGT AGCGC ACGCGCCAGCCACGCGC TTTGATCCGGTACGC TERM 363 843445 - 843481 + gT 93 -19.4 -2.84602 | overlap 843444 TTCACATGGACAGCC CGCGCGGCTGGCTCGT AGCGC ACGCGCCAGCCACGCG CTTTGATCCGGTACG TERM 364 843589 - 843635 + gT 70 -13.7 -2.57132 | gap 1, overlap 843588 AGCATGCACGCACCG CTGACC-GCATCGACCTCGAGC GGCT GATCGGGGTCGTAGCAGGTCAG GTTGTACCGGCCGAA trd_A0862 846096 - 844180 - | peptidase domain protein trd_A0863 846287 - 846141 - | hypothetical protein trd_A0865 846409 - 846525 + | hypothetical protein trd_A0864 846688 - 846500 - | hypothetical protein argG 846692 - 847915 + | argininosuccinate synthase TERM 365 847969 - 847931 - T 100 -21 -2.87132 | opp_overlap 847939 847939, overlap 847934 847938 CTGCTCGGGCAGATA CGACGAATCGGGGGCGCG TCT CGCGCCCCCAGTTCGTTG ACCGCCGTCATGTGT TERM 366 847966 - 847934 - T 100 -21.3 -2.69151 | opp_overlap 847939 847939, overlap 847931 847938 CTCGGGCAGATACGA CGAATCGGGGGCGCG TCT CGCGCCCCCAGTTCG TTGACCGCCGTCATG TERM 367 847962 - 847938 - T 83 -14.9 -3.26545 | opp_overlap 847939 847939, overlap 847934 847931 GGCAGATACGACGAA TCGGGGGCGCG TCT CGCGCCCCCAG TTCGTTGACCGCCGT TERM 368 847939 - 847961 + T 77 -16.2 -2.60075 | opp_overlap 847938 847934 847931, overlap 847939 GCAGATACGACGAAT CGGGGGCGCG TCT CGCGCCCCCA GTTCGTTGACCGCCG TERM 369 847939 - 847962 + T 88 -16 -3.33815 | gap 1, opp_overlap 847938 847934 847931, overlap 847939 GCAGATACGACGAAT C-GGGGGCGCG TCT CGCGCCCCCAG TTCGTTGACCGCCGT trd_A0867 848189 - 847995 - | hypothetical protein trd_A0868 849521 - 848445 - | Catalytic Domain Of MutyY TERM 370 849667 - 849636 - R 100 -26 -4.26903 | opp_overlap 849643 TGCAGCCGACGAAAA CACGGAAGCGGCCC AGCT GGGCCGCTTCCGTG CCTCCTCCTCACGCG TERM 371 849643 - 849660 + r 76 -14.1 -3.08464 | opp_overlap 849636 GACGAAAACACGGAA GCGGCCC AGCT GGGCCGC TTCCGTGCCTCCTCC miaA 850665 - 849676 - | tRNA delta(2)-isopentenylpyrophosphate transferase trd_A0870 850741 - 851793 + | aminodeoxychorismate lyase aroE 851790 - 852629 + | shikimate 5-dehydrogenase TERM 372 853199 - 853226 + G 72 -13.4 -3.13522 | gap 1, overlap 853196 GGTTGGCTCCTCTAT CGCCGCC-CTGCC CTC GGCAGTGGCGACG TGTTGCTCGCCGCCT trd_A0872 852701 - 853426 + | prepilin peptidase trd_A0873 855096 - 853726 - | stage V sporulation protein R yhbH 856258 - 855089 - | sporulation protein YhbH TERM 373 855142 - 855131 - G 82 -7.2 -4.65895 | overlap 855133 CTCGGGACCGAAAAA GCGC CGCA GCGC CTGGTACACGTCCGC trd_A0875 858325 - 856274 - | serine protein kinase TERM 374 856631 - 856649 + g 74 -13.2 -3.18681 | CTCGAGTTCCTCCTC GGTGATCG GGT CGATCACC TTCGTCCGGTTGACG trd_A0876 858749 - 858555 - | hypothetical protein trd_A0877 859094 - 860152 + | endoglucanase M (EGM) (Endo-1,4-beta-glucanase)(Cellulase M) TERM 375 860271 - 860228 - g 75 -10.3 -3.86346 | gap 2, opp_overlap 860230, overlap 860231 TTAGTCTTCTACAAA GCA-GCGGGCTCG-CGACGCT CGCC AGCGCAGGCGAGCCCGCGTTC CATATCGCATCGTTC TERM 376 860267 - 860231 - g 85 -16.6 -3.00946 | gap 1, opp_overlap 860230, overlap 860228 GTCTTCTACAAAGCA GCGGGCTCG-CGACGCT CGCC AGCGCAGGCGAGCCCGC GTTCCATATCGCATC trd_A0878 860182 - 861849 + | hypothetical protein trd_A0879 861867 - 862814 + | uroporphyrinogen decarboxylase trd_A0880 864236 - 863040 - | hypothetical protein trd_A0881 865240 - 864236 - | tyrosine recombinase TERM 377 864992 - 865029 + g 70 -4.8 -4.371 | gap 2 CACCGCTGCGAACGT CGTCTGGGC-CGTC-CGC ATCC GCGAGACTTGCTCGGGCG TTTTGATGTCGTCGG TERM 378 865553 - 865568 + G 75 -3.2 -4.77036 | overlap 865554 TGGACGCGCGTACGA TGCGTT CCAA AACGCC TTTTTGGTGATGCGC trd_A0882 865473 - 866210 + | hypothetical protein trd_A0883 866768 - 866262 - | two component transcriptional regulator, winged helix family trd_A0884 867646 - 867350 - | hypothetical protein trd_A0885 867736 - 867897 + | hypothetical protein trd_A0886 868171 - 867956 - | hypothetical protein trd_A0887 868521 - 868649 + | hypothetical protein trd_A0889 868687 - 870198 + | protein of unknown function, hydrolase family protein, putative ftsH 872080 - 870182 - | cell division protein FtsH trd_A0890 872713 - 872093 - | hypothetical protein trd_A0891 873060 - 872896 - | hypothetical protein trd_A0892 874471 - 873062 - | FAD dependent oxidoreductase trd_A0893 875826 - 875434 - | hypothetical protein TERM 379 875967 - 875943 - g 71 -10.7 -3.65827 | gap 1, opp_overlap 875960 CAAGCTGTACGCAAA GCGGCG-GGC TTCCGT GCCTCGCCGC GCCAGATTATCCCCG trd_A0894 875886 - 876431 + | hypothetical protein trd_A0895 877679 - 876462 - | aminotransferase, classes I and II trd_A0896 877885 - 877733 - | hypothetical protein TERM 380 878300 - 878326 + r 74 -13 -3.18264 | ATCTATCGGGTCACT GCCGGGCTGATC GCA GATTATCCCGGC TTGATCGCTGCGCGC trd_A0897 879880 - 878621 - | major facilitator superfamily MFS_1 TERM 381 878796 - 878837 + g 100 -19.6 -3.61715 | gap 2 TAGAGCCCCATCACG CGCCC-CC-GCACCTCGTCA TCGA TGGCGAGGTGCAGGAGGGCG TTATTGAGCGCCATG trd_A0898 880408 - 881268 + | polysaccharide deacetylase cofH 882598 - 881273 - | 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, CofH subunit cofG 883812 - 882598 - | 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, CofG subunit trd_A0901 884052 - 885422 + | hypothetical protein TERM 382 885594 - 885574 - T 73 -11.9 -3.31144 | opp_overlap 885574 885571, overlap 885558 GGGGCAGTGTTATAA TCCCGACCA AAT TAGTCGGGA TTATGATTCCGCTCG trd_A0902 886044 - 885664 - | hypothetical protein trd_A0903 886050 - 886175 + | hypothetical protein trd_A0905 886398 - 886910 + | hypothetical protein trd_A0904 887660 - 886905 - | D-aminopeptidase, putative TERM 383 887803 - 887767 - R 100 -14.4 -4.25848 | gap 1, overlap 887769 887771 AAGGGTCGACCAAAA CAGAGCGGTCCCGGGCG GAAG CACCCAGGACCGC-CAG TGCCGAGAGACCGAG TERM 384 887801 - 887769 - R 90 -15.6 -3.73042 | gap 1, overlap 887767 887771 GGGTCGACCAAAACA GAGCGGTCCCGGGCG GAAG CACCCAGGACCGC-C AGTGCCGAGAGACCG TERM 385 887800 - 887771 - R 100 -19.3 -3.44672 | overlap 887769 887767 GTCGACCAAAACAGA GCGGTCCCGGGCG GAAG CACCCAGGACCGC CAGTGCCGAGAGACC trd_A0906 889141 - 887828 - | receptor family ligand binding region trd_A0907 889660 - 889355 - | hypothetical protein pepF 889910 - 891733 + | oligoendopeptidase F trd_A0909 892588 - 891815 - | menaquinone biosynthesis methyltransferase UbiE trd_A0910 893204 - 892614 - | hypothetical protein trd_A0911 893434 - 893315 - | hypothetical protein trd_A0912 893478 - 894059 + | flavin-nucleotide-binding protein trd_A0913 894489 - 894085 - | hypothetical protein trd_A0914 894673 - 895593 + | protein of unknown function DUF6, transmembrane TERM 386 896437 - 896425 - g 76 -9.1 -4.11216 | TCGGGACGGGGAAAA CGCAC TCG GTGCG ACAGCTGTGCGAGAT gmd 895641 - 896696 + | GDP-mannose 4,6-dehydratase trd_A0916 897783 - 896992 - | transcriptional regulater GntR family protein TERM 387 898321 - 898331 + G 79 -6.8 -4.57837 | CAGTTGGCACCGGAG GCGA TCA TCGC TTTTTACCGCGATAT trd_A0917 897928 - 898926 + | aldolase TERM 388 898965 - 898976 + T 79 -5.8 -4.62336 | TTGTTTGTATGGCAG CAGC AGAC GCTG TTTTTCCCGTGACAT trd_A0918 899198 - 899067 - | hypothetical protein trd_A0919 899218 - 900711 + | toluene-4-monooxygenase system protein A TERM 389 900750 - 900717 - f 87 -17.4 -2.80935 | AGCTGACTGACGAGA GCGAGGGGGTAGGG AGTCGA CCCCGCCCCCTCGC AGAACACTCACGGAC trd_A0920 900787 - 901035 + | toluene-4-monooxygenase system protein B trd_A0921 901025 - 901390 + | toluene-4-monooxygenase system protein C trd_A0922 901408 - 901719 + | toluene-4-monooxygenase system protein D trd_A0923 901733 - 902740 + | toluene-4-monooxygenase system protein E TERM 390 903463 - 903450 - g 75 -3.8 -4.62441 | TCCCACAGAAAGAAA GCAG GCTCGT CTGC TCTACGGTGCAGCGA trd_A0924 902737 - 903744 + | xylene monooxygenase electron transfer subunit trd_A0925 903815 - 904264 + | hypothetical protein TERM 391 904474 - 904501 + F 71 -9.2 -3.72576 | gap 1, overlap 904448 GCAAGACTGCTGTCA GGAC-GCGTCG ATCATTC CGACGCTGTCC TTTACTACCCCGAGG TERM 392 905043 - 905058 + G 70 -2.4 -4.68124 | TCTTCATGGGCAATG CTGGCG TGTT CGACGG TTTTCTCTCTCTTCC trd_A0926 904778 - 905611 + | 2,3-dihydroxy-2,3-dihydro-phenylpropionate dehydrogenase trd_A0927 905627 - 906742 + | epoxide hydrolase 1 (Microsomal epoxide hydrolase)(Epoxide hydratase) trd_A0928 906758 - 907930 + | pigment production hydroxylase trd_A0929 907943 - 909493 + | 4-hydroxyphenylacetate 3-monooxygenase oxygenase component (4-HPA 3-monooxygenase large component) (4-HPA 3-hydroxylase) TERM 393 909854 - 909867 + G 71 -8.1 -4.07687 | GGGTGGGTGGCAGCG TGGGC AGCA GCCCA TTTTCCCGAGCGGGT trd_A0930 909503 - 910360 + | 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase trd_A0931 910397 - 911875 + | pyoverdin chromophore biosynthetic protein PvcC trd_A0932 911872 - 912735 + | short chain dehydrogenase trd_A0933 912687 - 913187 + | cupin 2, conserved barrel domain protein trd_A0934 913237 - 914136 + | catechol 2,3-dioxygenase TERM 394 914357 - 914397 + G 86 -18.4 -2.56095 | gap 1, overlap 914354 GCGGACTTCGATCTA TGGACGCTCGGGCTCGTCC AAGC GGACGAGCCCGGGC-TCGA TCACTTCGCTCTCCG hpaD 914189 - 915154 + | 3,4-dihydroxyphenylacetate 2,3-dioxygenase TERM 395 915173 - 915212 + T 80 -15.6 -2.87132 | opp_overlap 915163 915164 CACAACCTCCCTCAC CGGGGAGGGCGGCTCGCC GTGA GGCGAGCCACCCTCTCGA TATGTCAAAACGGCA trd_A0936 917241 - 915217 - | nerd domain protein trd_A0937 917518 - 917384 - | hypothetical protein