TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.587168 %AT, 1317018 nt, 6669 terms. Intergenic: 0.667904 %AT, H2T: 169067 nt, 905 terms; T2T: 60462 nt, 744 terms; H2H: 79426 nt, 1025 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|13540831|ref|NC_002689.2| Thermoplasma volcanium GSS1, complete genome (length 1584804) TERM 1 513 - 530 + G 79 -8.5 -4.09963 | AAATACTTAGCACTG TTAGGTC TGCA GACCTAA TTGTTATTGTTACAG TVN0001 110 - 1192 + | GTPase TVN0002 1433 - 3442 + | formate dehydrogenase, alpha subunit TERM 2 3810 - 3788 - g 77 -4.9 -5.0538 | TTGTATGTGAAAAAA TGTGCAG CGGAGGGTT CTGCACA AGCTTTGGGGGGCCT TERM 3 4149 - 4137 - g 72 -7.7 -3.82604 | opp_overlap 4133 TGACGGAAGGAAGAA GGAGT GGG ACTCC TGCATACTTGAGGGC TVN0003 3439 - 4359 + | ferredoxin subunit of sulfhydrogenase II TERM 4 4395 - 4376 - f 76 -4.4 -5.1287 | gap 1 TGGATACCGAAAAAA CTAAAGCCT TAT AGG-TTTAG GATGGAAACGGCAGA TVN0004 4397 - 5131 + | anaerobic sulfite reduction protein B TVN0005 5588 - 7018 + | phosphate ABC transporter permease TERM 5 7047 - 7070 + T 73 -9 -3.17941 | opp_overlap 7053, overlap 7053 7067 CTTAGATGCGGCTTT GTCAAATATC CGTT GATATTTGGC TTCCTGCCATCTGCT TVN0006 7455 - 7048 - | hypothetical protein TVN0007 7691 - 8143 + | 30S ribosomal protein S19e TERM 6 8121 - 8145 + F 72 -9.5 -2.73681 | opp_overlap 8119 8117 TGGCACAGAAAGATC CTTTATATGAG AAA TTCATATAAAG TGATTGAAATGAGTG TVN0008 8127 - 8501 + | hypothetical protein TERM 7 8622 - 8611 - g 70 -3.6 -4.76274 | overlap 8612 GAAAGTAACACAAAA CCCC CTAA GGAG AAATTGGAGACGTGG rpl39e 8498 - 8653 + | 50S ribosomal protein L39e TVN0010 8663 - 8932 + | 50S ribosomal protein L31e TVN0011 8973 - 9629 + | translation initiation factor IF-6 pyrE 10130 - 9630 - | orotate phosphoribosyltransferase TVN0013 10229 - 12073 + | Rad3-related DNA helicase TVN0014 12192 - 12647 + | N-terminal acetyltransferase complex, Ard1 subunit TVN0015 13867 - 12665 - | S-adenosylmethionine synthetase purH 14001 - 15470 + | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase TVN0017 16230 - 15475 - | enoyl-CoA hydratase TVN0018 17173 - 16337 - | hypothetical protein TERM 8 16419 - 16405 - G 79 -11.4 -2.55213 | opp_overlap 16405, overlap 16401 TATTTATGTAAGGGA GGCCTG GTG CAGGCC TGTCTCTATTACAAA TERM 9 16405 - 16419 + g 84 -11.4 -3.10493 | opp_overlap 16405 16401 TATTTATGTAAGGGA GGCCTG GTG CAGGCC TGTCTCTATTACAAA TVN0019 19496 - 17184 - | DNA topoisomerase I TERM 10 18760 - 18770 + g 86 -2.6 -5.90981 | GAATTAGCTACATCC TTAT CGA ATAA TTTTTTTTCATATGC TERM 11 19209 - 19233 + g 75 -5.7 -4.70626 | opp_overlap 19214, overlap 19214 CTTTCCTTTAAAAGA CGATAGTGTCT GAT AGGCACTCTTG TTTTTAACCTTCTTC TVN0020 19774 - 19502 - | acylphosphatase TVN0021 21347 - 19869 - | permease TVN0022 22242 - 21463 - | ABC-type multidrug transport system, ATPase component TVN0023 23743 - 22763 - | hypothetical protein TERM 12 22889 - 22901 + g 72 -7.7 -3.83998 | TACGTTAACTGATAG CGCAA CCA TTGCG TTTGCTATACCCTGA TVN0024 23909 - 25258 + | 4-aminobutyrate aminotransferase TVN0025 25781 - 25269 - | hypothetical protein TERM 13 25679 - 25689 + g 74 -6.8 -4.39828 | TTATCAGTGATCTGA CGGT GCT ACCG TTTTCTCCGACTCTT TVN0026 26689 - 25913 - | arsenite transporting ATPase TVN0027 26800 - 27936 + | cell division protein FtsZ TERM 14 27965 - 27988 + F 73 -9 -3.19003 | opp_overlap 27978 TTATGTTCAGGCTTT GTCAAATATC AACG GATGTTTGAC TTCCTGCCATATTCT TVN0028 28471 - 29151 + | orotidine 5'-phosphate decarboxylase TERM 15 29835 - 29857 + G 78 -10.6 -3.32022 | opp_overlap 29834 29838, overlap 29838 GGAATTTTATATAAG GAAGCCTTTG CTT CAAAGGCTAC TTGGTATCTAAAGGA TERM 16 29838 - 29854 + G 77 -10.9 -2.83345 | opp_overlap 29834 29838, overlap 29835 ATTTTATATAAGGAA GCCTTTG CTT CAAAGGC TACTTGGTATCTAAA TERM 17 29854 - 29838 - g 83 -10.9 -3.49886 | opp_overlap 29838 29835, overlap 29834 ATTTTATATAAGGAA GCCTTTG CTT CAAAGGC TACTTGGTATCTAAA TVN0029 29176 - 29868 + | secreted serine protease (ClpP class) cobD 30797 - 29865 - | cobalamin biosynthesis protein TVN0031 32274 - 30868 - | cobyric acid synthase TERM 18 32983 - 32970 - g 75 -2.3 -5.27335 | TCTCGTAAAGAAAAA CCGTG TTTA CAGGG ACCTAGCCCCAACAA valS 32497 - 34869 + | valyl-tRNA synthetase TERM 19 34940 - 34963 + F 85 -10.4 -3.34401 | overlap 34946 TCACCATTGGGTCCT GTCAAATGTC CGTT GACGTTTGAC TTCCTGTAATATTTT TVN0033 35198 - 36820 + | CTP synthetase TERM 20 37469 - 37479 + F 76 -6.8 -4.60487 | opp_overlap 37469 37460 CCATAACTTAAAACT CTCC GAA GGAG TTTTTAAGAGTCATG TVN0034 37710 - 38039 + | sterol carrier protein TVN0035 38125 - 41370 + | DNA polymerase II large subunit TVN0036 41375 - 42148 + | GTPase TVN0037 42771 - 42157 - | hypothetical protein TERM 21 42502 - 42526 + g 80 -8.7 -4.04415 | overlap 42511 CACTATAACTCTGAC TATGTCTTTGA ATT TCAAAGCCATA TTTGATATTCTTTCC TVN0038 43039 - 42761 - | hypothetical protein TVN0039 43106 - 43618 + | hypothetical protein TVN0040 43806 - 44090 + | hypothetical protein TVN0041 44713 - 44114 - | regulator of amino acid metabolism TVN0042 45074 - 44802 - | hypothetical protein TVN0043 45689 - 45165 - | hypothetical protein TERM 22 46818 - 46801 - g 71 -4.9 -4.73635 | GATAAGGCAATAAAA GTAGTTC CAGC AAACTAC AATTATCTTGCTATG TVN0044 46243 - 46971 + | TPR repeat-containing protein TVN0045 47335 - 46979 - | hypothetical protein TERM 23 47006 - 47023 + g 71 -4.1 -4.90013 | overlap 46997 TCTGAAGAACTCAAA GCTCAGT TCTG ATTGGGC TTTTTCCTTCAATTC TVN0046 47464 - 48222 + | exonuclease III TERM 24 48216 - 48242 + T 79 -9.8 -3.15544 | opp_overlap 48216 48220 GGAGCTAGAAATTGA TATATAAAATTA AAT TAATTTTATATA TTCGTACGCATCAAC TERM 25 48242 - 48216 - T 75 -9.8 -2.71325 | opp_overlap 48216, overlap 48220 GGAGCTAGAAATTGA TATATAAAATTA AAT TAATTTTATATA TTCGTACGCATCAAC glyA 49505 - 48225 - | serine hydroxymethyltransferase TVN0048 49756 - 49983 + | H+-ATPase subunit K TERM 26 50285 - 50299 + G 77 -8.5 -3.95852 | opp_overlap 50269 50284 50282 50285 GAATATTCGAAATAT GCCGG AATAC CCGGC TTTACTTAATAAGAT TVN0049 49989 - 50546 + | V-type ATP synthase subunit E TERM 27 50587 - 50601 + G 87 -8.6 -4.56775 | opp_overlap 50586 50587 TATGGAAGGCTAAAG GTCTAC GAG GTAGAC TTTTTAAAGAAGGAT TVN0050 50548 - 51618 + | V-type ATP synthase subunit C TVN0051 51620 - 51934 + | V-type ATP synthase subunit F TVN0052 51944 - 54274 + | V-type ATP synthase subunit A TVN0053 54255 - 55637 + | V-type ATP synthase subunit B TVN0054 55622 - 56269 + | V-type ATP synthase subunit D TVN0055 56417 - 56752 + | V-type ATP synthase subunit H TVN0056 56755 - 58686 + | V-type ATP synthase subunit I TVN0057 58751 - 59350 + | glutamine amidotransferase subunit PdxT TERM 28 60018 - 59996 - g 70 -5.6 -4.386 | opp_overlap 59988 GAACTTTGGAGAAAA CTCCTCTC ATTAGTA GAGAAGAG ATCTGGGTTGCCATG TVN0058 59351 - 60439 + | aminomethyltransferase (glycine cleavage system T protein) TVN0059 61804 - 60866 - | UDP-glucose 4-epimerase TERM 29 61204 - 61216 + g 72 -6.3 -4.37348 | overlap 61207 CTTGAGTTCCGTCTC CTAGA ACT TCTAG TTCTTTCTTGTTGTT TERM 30 61207 - 61219 + g 77 -6.3 -4.61648 | overlap 61204 GAGTTCCGTCTCCTA GAACT TCT AGTTC TTTCTTGTTGTTCTT TVN0060 61978 - 62181 + | nucleic-acid-binding protein (Zn-ribbon) TVN0061 62254 - 62871 + | superoxide dismutase TERM 31 62860 - 62872 + F 70 -2 -5.35222 | AAGGCTTACGAAGCT TTCA AATCC TGAA TTTTTTATGGATTTT TERM 32 63390 - 63367 - g 76 -2.5 -5.38326 | TCAAGTAAAGAAAAA TACAAGTAG GAAAAA CTACCTATA CAATGAATCTATATT TVN0062 62879 - 63493 + | N-glycosylase/DNA lyase TVN0063 64561 - 63671 - | phosphate permease TVN0064 65125 - 64561 - | hypothetical protein TVN0065 65335 - 65973 + | MarC family integral membrane protein TVN0066 65980 - 66474 + | 2'-5' RNA ligase TVN0067 66522 - 67031 + | hypothetical protein TERM 33 67027 - 67016 - T 70 -7.2 -3.88175 | opp_overlap 67008 67016, overlap 67008 GAGAGAGGAGAAGAA GGCC CTAA GGCC TTAATCTCTGTTCGA TVN0068 67504 - 67028 - | nucleic-acid-binding protein TERM 34 67405 - 67421 + g 72 -6.5 -4.25458 | opp_overlap 67408 ACTTTTTAATCTTAA GTACTGG TAT CCTGTAC TTTATTGATAGGCTT TVN0069 68678 - 67506 - | acetyl-CoA acetyltransferase TVN0070 69015 - 70322 + | proline/betaine transport permease TERM 35 70610 - 70600 - g 87 -8.2 -4.43877 | overlap 70601 TAATTCCGAAACAAA GCCC CCG GGGC GTACGCCCACAATAA TVN0071 70571 - 71521 + | threonine synthase TVN0072 71521 - 72555 + | hypothetical protein TERM 36 72560 - 72578 + F 74 -6.2 -4.52857 | opp_overlap 72564, overlap 72564 ATAACATCTGATTTT TAAATAAA TTT TTTATTTA TTTTATGTACAAAAT TVN0073 72606 - 74006 + | metal-binding protein containing TVN0074 74056 - 75057 + | D-mannonate dehydratase TVN0075 75831 - 75046 - | aldose dehydrogenase TVN0076 76361 - 75867 - | hypothetical protein TVN0077 77128 - 76358 - | hypothetical protein TVN0078 78166 - 77159 - | histidinol-phosphate aminotransferase TERM 37 77913 - 77924 + g 75 -2.2 -5.30155 | overlap 77906 GAAAAATTTGGCATT GCTA TTAT TGGC TTTTTTACTTGGTAA TVN0079 78297 - 79184 + | hypothetical protein TVN0080 79186 - 79590 + | hypothetical protein TVN0081 80637 - 79558 - | nucleoside-diphosphate-sugar pyrophosphorylase TERM 38 79692 - 79706 + g 71 -4.2 -4.7497 | CCGTGTTCTGCATTA TAACCG AAT CGGATA TTTTTGATCCATCCA TVN0082 81816 - 80863 - | hypothetical protein TVN0083 83194 - 81827 - | cytochrome bd-type quinol oxidase, subunit 1 TVN0084 83526 - 84143 + | transcription activator TVN0085 84869 - 84357 - | hypothetical protein TERM 39 84740 - 84708 - G 82 -8.5 -4.3467 | opp_overlap 84707 ATTGCCAGAGTAAAA GTAAACGTTTACGTA CAT CACGTTAACGGTTAC GCTATCTTCTAGGGA TVN0086 85061 - 85666 + | alpha/beta superfamily hydrolase TVN0087 85663 - 86076 + | molybdopterin converting factor, large subunit TERM 40 86149 - 86161 + T 77 -3.5 -5.52347 | ATTGGTTAATTTTAA TATAT CAC ATATA TTTTTTAATTTTCTT TERM 41 86308 - 86277 - T 84 -8.2 -4.61633 | gap 1, overlap 86281 ATACACGCTTAAAAA TGCACCTTTTAATGC ATT GCATTAAAAGG-GAA GATGTCGATTTTTGA TERM 42 86305 - 86281 - T 95 -14.5 -2.84171 | overlap 86277 ACGCTTAAAAATGCA CCTTTTAATGC ATT GCATTAAAAGG GAAGATGTCGATTTT TERM 43 88826 - 88810 - T 70 -7.3 -3.72788 | GGTGATAAGAGAGAA GTTACCC CAG GGATAAC TGAGTCGTCCTCGGC TVN0088 90245 - 89391 - | ATPase involved in chromosome partitioning TERM 44 90320 - 90339 + r 78 -7.9 -4.10791 | opp_overlap 90319 90332, overlap 90332 AGCTAAAAAGATATT CAGGGTT TAGAAT AACCCTG TTATTTCTCCATCTT TVN0089 91936 - 90326 - | formyltetrahydrofolate synthetase TVN0090 92547 - 91933 - | formiminotetrahydrofolate cyclodeaminase TVN0091 93539 - 92631 - | glutamate formiminotransferase TERM 45 93747 - 93735 - H 79 -4.1 -5.2894 | overlap 93736 AAAGATAAAACAAAA CTCAC GGT GTGAA TATGGTTAAAGAGGT TERM 46 94571 - 94588 + G 81 -4.1 -5.26119 | GCACTCATACACAAG TCTGGTG GCGG TACCGGA TTTTCTTTTTCCAGG TVN0092 93749 - 96052 + | ribonucleotide-diphosphate reductase subunit alpha TVN0093 96843 - 96070 - | metal-dependent hydrolase TERM 47 97033 - 97019 - R 72 -5.8 -4.31397 | opp_overlap 97018 97019 97021, overlap 97024 ACGTTTATAAAAGAA TAGATT AAT AATCTA CTTATTATAAAATCA TVN0094 98920 - 97142 - | chloride channel protein TVN0095 100097 - 99129 - | cell wall biosynthesis glycosyltransferase TVN0096 100770 - 100132 - | 2-phosphosulfolactate phosphatase TVN0097 101839 - 100811 - | Kef-type K+ transporter NAD-binding component TERM 48 101702 - 101715 + g 78 -2.3 -5.4505 | opp_overlap 101702 AGCAGTGACGATAAA CCAGG CTGC CCTCG TTTTTTCTTGGAGGC TERM 49 102257 - 102243 - g 71 -4.3 -4.90002 | opp_overlap 102254, overlap 102254 102256 GAAGACATAAGAAAA GATCT ATTTA AGATC CAGAACGATCTATTC TERM 50 102625 - 102592 - g 81 -5.3 -5.14965 | opp_overlap 102592 102594 ATGTGGAGGAAAAAA TATGGCCCATCCATC TGCC AAAAGATGGGTCATA ATTTGAAGTGCAATG TVN0098 102084 - 102626 + | hypothetical protein TVN0099 103931 - 102621 - | dihydrolipoamide dehydrogenase TVN0100 105141 - 103933 - | branched-chain alpha-keto acid dehydrogenase subunit E2 TERM 51 104840 - 104854 + g 74 -7.8 -3.91352 | overlap 104833 GCGATCTGCTGCGCT GCCGTA GTC TGCGGC TTTAATTCGGCATGT TVN0101 106100 - 105141 - | thiamine pyrophosphate-dependent dehydrogenase, E1 component beta subunit TVN0102 107110 - 106097 - | branched-chain alpha-ketoacid dehydrogenase, E1 component alpha subunit TERM 52 106604 - 106569 - G 73 -9.8 -3.01537 | gap 1, overlap 106562 ACAGGGAACGATATA GCCCAGCCGTTATTCTC ACA GAGAAAAACGAC-AGGC AGATCGTACACTGAA TERM 53 107306 - 107292 - R 73 -3.6 -5.10033 | opp_overlap 107292 GTAATATAAATAAAA TATAGC ACA ACTATA ATTTTATTTTCTCGT TVN0103 108185 - 107310 - | methionine aminopeptidase TVN0104 108867 - 108190 - | hypothetical protein TERM 54 108612 - 108599 - G 70 -8.1 -3.65046 | GCCTTATCGTAATAA GCCAG TATT CTGGC GTTAAAGTCAGCGAG TERM 55 110391 - 110381 - R 71 -5.4 -4.55118 | overlap 110382 CAAGGTGAGAGAAAA TGTG TTT CACA CCAGTTGGATTTGTA TVN0105 110910 - 110650 - | hypothetical protein TVN0106 111878 - 110910 - | hypothetical protein TVN0107 112590 - 111880 - | hypothetical protein TVN0108 113768 - 112611 - | hypothetical protein TERM 56 112909 - 112923 + g 70 -2.8 -5.02777 | ATTTCATTCTTTGTA TGATCC GAG GCATCA TTTATTTTTATGTCT TERM 57 113386 - 113397 + g 75 -2.2 -5.31855 | GAACCTGGTATAAAG GGCA CAAA TGTC TTTTTATTATTAATA TVN0109 114659 - 113769 - | hypothetical protein TVN0110 115350 - 114661 - | hypothetical protein TVN0111 115783 - 115343 - | hypothetical protein TERM 58 115419 - 115399 - G 70 -5.5 -4.57569 | opp_overlap 115401 CTATTGCCTGAAAAA CATTCAAAA ATC TATTGAATG CATTCTCAAAATCTT TVN0112 118155 - 115828 - | HD superfamily hydrolase TERM 59 116083 - 116103 + g 70 -2.5 -5.05606 | opp_overlap 116084 116086, overlap 116084 AAGGTTATTTAGAAA ATAGGGAAA ACC TTTCCCAAG TTTGTTTTTATTAGG TERM 60 116102 - 116084 - G 73 -6 -4.42653 | opp_overlap 116084 116083, overlap 116086 AGGTTATTTAGAAAA TAGGGAAA ACC TTTCCCAA GTTTGTTTTTATTAG TERM 61 116100 - 116086 - G 75 -8.6 -3.82117 | opp_overlap 116084 116083, overlap 116084 GTTATTTAGAAAATA GGGAAA ACC TTTCCC AAGTTTGTTTTTATT TVN0113 118858 - 118145 - | hypothetical protein TERM 62 118518 - 118507 - G 73 -5.8 -4.49132 | CTAAATATAAAACAA CAGG GCTT CCTG TAATAAAATCCTTTG TERM 63 118530 - 118549 + g 79 -6.6 -4.58946 | opp_overlap 118529 CCTGTAATAAAATCC TTTGATAT ATTT ATATCAAA TTCTTTTATTTCTGC TVN0114 119105 - 120325 + | hypothetical protein TERM 64 120805 - 120823 + F 86 -10.4 -3.62775 | AGGTGTTGCAATTTG TGTTGCAA CGG TTGCAACA TTATTGCGACATAGT TERM 65 120905 - 120935 + F 95 -15 -2.71263 | overlap 120926 ATACGCATTTTTTTG TGTTGCAATAAATG AGA CGTTTATTGCAACA TGATTGCAACAAGTT TERM 66 120950 - 120966 + F 79 -9.5 -3.45405 | opp_overlap 120939 120936 120949 120948, overlap 120926 120949 ATGATTGCAACAAGT TGCAACA TAG TGTTGCA TATTCATTTTATCCC TERM 67 121206 - 121245 + F 77 -9.4 -3.2348 | gap 1, overlap 121207 121210 121233 121234 TATTTTAGGCATTTT C-CGATGTTGCAACTGGTG TTG CAACGGTTGCAACATAGTG TTGCATATTCATTTT TERM 68 121207 - 121243 + F 91 -13.1 -3.16618 | overlap 121206 121210 121233 121234 ATTTTAGGCATTTTC CGATGTTGCAACTGGTG TTG CAACGGTTGCAACATAG TGTTGCATATTCATT TERM 69 121210 - 121240 + F 89 -13.4 -2.77678 | overlap 121207 121206 121233 121234 TTAGGCATTTTCCGA TGTTGCAACTGGTG TTG CAACGGTTGCAACA TAGTGTTGCATATTC TERM 70 121234 - 121250 + F 79 -9.5 -3.45405 | overlap 121210 121207 121206 121233 TGGTGTTGCAACGGT TGCAACA TAG TGTTGCA TATTCATTTTATCCC TERM 71 121413 - 121423 + F 72 -2.6 -5.24796 | overlap 121419 ATAATGACCTTGCAG TTTT TCT AAAA TTTTTATTCTATACA TERM 72 122289 - 122306 + F 76 -9.9 -2.92668 | GGTGTATGTTCTCAA TTCGGCA GCAC TGCCGAA TGTACTTCCATACTA TVN0115 123780 - 124526 + | hypothetical protein TVN0116 124519 - 124725 + | hypothetical protein TVN0117 126027 - 124714 - | tRNA CCA-pyrophosphorylase nac 126383 - 126024 - | nascent polypeptide-associated complex protein TVN0119 127458 - 127036 - | ferredoxin TVN0120 127681 - 128172 + | hypothetical protein TVN0121 128764 - 128375 - | hypothetical protein TERM 73 129601 - 129615 + G 86 -7.8 -4.62336 | overlap 129602 ATTATTCTCCATTTA TTGCCG GTT CGGCAG TTTTTGGCATGAGCT TERM 74 129602 - 129614 + G 71 -9.1 -3.3692 | overlap 129601 TTATTCTCCATTTAT TGCCG GTT CGGCA GTTTTTGGCATGAGC TVN0122 128958 - 130538 + | Acyl-coenzyme A synthetase TERM 75 130541 - 130528 - f 71 -6.7 -4.22414 | opp_overlap 130528 AATTCAACATAGAAA GGATC GAAT GATCC TTAATGGATGAGATA TVN0123 130805 - 132220 + | phosphate ABC transporter permease TERM 76 132912 - 132928 + G 79 -10.9 -3.18264 | opp_overlap 132911 132910 TTTATGGTGACAATT TGCTTGC AAT GCAAGCA TTCCTGGCTGGAGAC TVN0124 132662 - 133675 + | adenine specific DNA methylase TERM 77 134660 - 134632 - g 93 -8.9 -4.42081 | AATAGAAAGGTAAAA CTCCTTGTGCCAA GAA CTGGCAAAAAGAG AAGGGTGTGCGTAAG TVN0125 133681 - 134727 + | adenine specific DNA methylase TVN0126 136991 - 135483 - | Acyl-CoA synthetase (AMP-forming) TVN0127 138433 - 137051 - | sugar kinase TERM 78 138016 - 138026 + g 74 -6.8 -4.3277 | CAGAAACGATCTTTT TGCC GGA GGCA TTTATCTTCTCTATC TVN0128 138528 - 139547 + | oxidoreductase TVN0129 139649 - 139918 + | hypothetical protein TVN0130 139971 - 141026 + | hypothetical protein TVN0131 141013 - 142182 + | acetyl-CoA acetyltransferase TERM 79 142275 - 142287 + G 73 -9.1 -3.53811 | GGAACGGTATATTTT CCTCC AAG GGAGG TTTGCCCGACATGCC TVN0132 142185 - 142586 + | nucleic-acid-binding protein rnhB 143242 - 142583 - | ribonuclease HII TVN0134 143455 - 143985 + | hypothetical protein TVN0135 143986 - 144477 + | hypothetical protein TVN0136 144724 - 144948 + | integrase/recombinase TERM 80 145526 - 145540 + G 74 -7.8 -4.05926 | ATACAATCCCACCAG CCAGCG AAT TGCTGG TTTCTGACTTTCTTG TVN0137 145021 - 145569 + | integrase/recombinase TVN0138 147033 - 145846 - | multidrug efflux permease TVN0139 147614 - 147168 - | hypothetical protein TERM 81 147651 - 147632 - R 71 -7.9 -3.53224 | opp_overlap 147632 TACTTCTCTGTTAAA TACGGTG TTATAC CACCGTA TTGTGGAAAGAAAGC TVN0140 148155 - 147946 - | transposon-encoded protein TVN0141 148313 - 148825 + | hypothetical protein TVN0142 148943 - 149119 + | hypothetical protein TERM 82 149390 - 149404 + G 77 -8.6 -3.93166 | opp_overlap 149390 149389 AGTTATTCTAATAAT GGAGAA AGA TTCTCC TTGGTTTTTTAGAAC TVN0143 149208 - 149603 + | hypothetical protein TVN0144 149832 - 150464 + | hypothetical protein TERM 83 150554 - 150567 + F 76 -3.9 -5.35365 | opp_overlap 150541 AATTTAGACATTATT CTAAA AGAG TTTAG TTTTTCTTATGTTTT TERM 84 151607 - 151590 - g 74 -4.3 -5.01732 | opp_overlap 151590 AACTCTTCCAAAAAA TAAATAT TATG ATATTTA CTTTCCTCTTCTGTT TVN0145 151549 - 152070 + | hypothetical protein TVN0146 153692 - 152244 - | Na+/proline symporter permease TVN0147 153888 - 153694 - | hypothetical protein TVN0148 158269 - 154235 - | multitransmembrane protein TERM 85 155387 - 155405 + g 80 -8.8 -3.98113 | AAGCCCACTCAGCTT GACTGTGG ATA CCTCAGTC TTTAGTTCGTGCTTG TERM 86 155654 - 155665 + g 71 -4.4 -4.7871 | CCAGTAAGACCATAC CTTG AAGC CAAG TTTTTCGTAATAATT TVN0149 158468 - 159187 + | ABC-type multidrug transport system, ATPase component TVN0150 159177 - 160586 + | hypothetical protein TVN0151 160657 - 161955 + | amino acid transporter TVN0152 161955 - 162980 + | hypothetical protein TVN0153 164004 - 162982 - | dihydropteroate synthase hisS 165338 - 164058 - | histidyl-tRNA synthetase TERM 87 165612 - 165590 - R 75 -4.9 -4.95854 | GAAAAAATTGAAAAA CAGAATACG CATAT CTTATTCTG ATAGGAAAGGTAACC TVN0155 167215 - 165728 - | ATP-dependent protease TVN0156 168489 - 167197 - | DNA primase TVN0157 168808 - 169833 + | endonuclease IV TERM 88 169826 - 169816 - f 76 -6.8 -4.57073 | CATCTTGCTGAAAAA CCTG TTT CAGG TGAATGAAGTGAGGG TVN0158 169835 - 170125 + | hypothetical protein TVN0159 170662 - 170162 - | hypothetical protein TVN0160 170994 - 171266 + | nucleoid DNA-binding protein (HB-related) TERM 89 172087 - 172122 + G 93 -12.7 -3.21354 | opp_overlap 172085 172105 GATCAATAAGGGATG CATCCGCCATGTCAA AGACCA TTGACATGGCAGGTG TTGATCGGTGTGTAA TVN0161 171420 - 172799 + | hypothetical protein TVN0162 173429 - 172869 - | 30S ribosomal protein S7P rps12P 173860 - 173432 - | 30S ribosomal protein S12P TVN0164 174519 - 175535 + | phosphoribosylaminoimidazole synthetase TERM 90 175512 - 175529 + T 79 -9.9 -3.31914 | overlap 175511 ATACCAAAATATTCT GTATCCC TCAT GGGATAC TATTGATTACTTTGA TVN0165 176453 - 175536 - | ABC-type multidrug transport system, ATPase component TERM 91 175752 - 175772 + g 73 -2.6 -5.1287 | gap 1 ATCGTCTGTGATTGG CTGA-AGTG TCTC CGCTATCAG TTTTTTGGATCTGAA TERM 92 176215 - 176246 + g 82 -8 -4.54343 | GGCGACTCTATGACT GAGCCTGTAACCGC AAAG GCTTTTACAGGTTC TTTGTTTACGTTTAT TVN0166 177285 - 176458 - | ABC transporter permease TVN0167 177412 - 178020 + | Zn-dependent hydrolase TVN0168 178079 - 179275 + | galactonate dehydratase TERM 93 179418 - 179400 - g 86 -11.8 -3.07113 | overlap 179402 179404 GAGGATTCGATGGAA GAGACAAC ATA GTTGTCTC CGGTAATAATTTTTC TVN0169 179306 - 180022 + | ATPase TVN0170 180080 - 180289 + | hypothetical protein TVN0171 180992 - 180390 - | folate-dependent phosphoribosylglycinamide formyltransferase TERM 94 181028 - 181048 + r 100 -13.3 -4.25681 | opp_overlap 181023 TCGTATTATATTTTA GGTGTAGGG CAA CCCTGCACC TTTATTACCTTCAAT TVN0172 181448 - 181068 - | hypothetical protein tdk 182103 - 181531 - | thymidylate kinase TVN0174 182184 - 183353 + | cystathionine gamma-lyase TERM 95 183371 - 183359 - T 71 -3.3 -5.02476 | opp_overlap 183367, overlap 183360 AGAGTCTTGAAAAAA TCAGC TTT GCTGT ACGGAAGCTTTTTTC TERM 96 183367 - 183401 + T 76 -3.6 -5.252 | gap 1, opp_overlap 183360 183359 GAAAAAATCAGCTTT GCTGTACG-GAAGCT TTTTTC ATCTCCTCGTACAGC TTTTTTGTCCCGCTC TVN0175 184108 - 183359 - | deoxyribose-phosphate aldolase TVN0176 185525 - 184113 - | major facilitator superfamily permease TVN0177 185679 - 185867 + | hypothetical protein TVN0178 186386 - 185868 - | C4-type Zn finger protein TVN0179 187433 - 186390 - | isopentenyl pyrophosphate isomerase TVN0180 188164 - 187430 - | kinase TERM 97 187508 - 187522 + g 71 -4.3 -4.77165 | opp_overlap 187508 GCCATTGATTAAATA TACAC TCTTT GTGTA TTTTCTTATCAAAAA TVN0181 188691 - 188161 - | acetyltransferase TERM 98 188740 - 188720 - H 75 -6.9 -4.18494 | TATGGTTATTTAAAA TGTAATGCA ACT TGCAGTACA GAAATAGTTATTGTC TERM 99 189049 - 189020 - g 100 -9.5 -4.59109 | TACAGGGTTGAAAAA CAGTCTGATATAT ATGA ATATATAAGACTG CATGGAGATCCAAAT TVN0182 188777 - 189568 + | Zn-dependent hydrolase TVN0183 190586 - 189621 - | phosphate uptake regulator TVN0184 191352 - 190639 - | hypothetical protein TERM 100 191424 - 191436 + H 72 -4.9 -4.81212 | GCAAAATTATTCTAA TTACT GTA AGTAA TTTTATTATAGTAAA TVN0185 191467 - 192051 + | transcription regulator TVN0186 192133 - 192666 + | hypothetical protein TVN0187 192660 - 193013 + | peptidyl-tRNA hydrolase TVN0188 193297 - 193127 - | hypothetical protein TVN0189 193469 - 196114 + | aconitate hydratase TERM 101 196816 - 196793 - g 73 -9 -3.44334 | overlap 196798 TCAAAGTAATAGGAA TAGAATCAGA GCTG TCCGATTCTA TGAAAGCATCACTCC TVN0190 196177 - 197397 + | threonine dehydratase TVN0191 197394 - 197945 + | RNA methylase TVN0192 198066 - 198521 + | transcription regulator TVN0193 199096 - 198518 - | SAM-dependent methyltransferase aroD 199215 - 199907 + | 3-dehydroquinate dehydratase TVN0195 200001 - 201218 + | isocitrate dehydrogenase TVN0196 201922 - 201215 - | hypothetical protein TVN0197 202775 - 201915 - | ribose-phosphate pyrophosphokinase TERM 102 202065 - 202052 - G 70 -5.9 -4.25104 | TTCCGTTGACGAAAA GGCCG TGAA CAGCC GACACATATATCTTT TVN0198 202930 - 203661 + | enoyl-CoA hydratase TVN0199 203649 - 204668 + | N-acetylglucosamine kinase TVN0200 206426 - 204657 - | phosphoenolpyruvate carboxykinase TERM 103 205074 - 205063 - G 81 -7.2 -4.59773 | opp_overlap 205062 TTGTAGCCGCAAAAA GGCC GCAT GGCC ATTGGGTCCCTCCTG TVN0201 207356 - 206628 - | metal-dependent hydrolase related to alanyl-tRNA synthetase TERM 104 206825 - 206839 + g 71 -4.2 -4.86001 | overlap 206836 TTCCAGGTTCAGTTC GGGCAA GAT TTGGCC TTTTTATGGCCTCCT TERM 105 207580 - 207566 - g 72 -6.4 -4.35742 | overlap 207567 207575 ATCTAACGATGAAAA CTGCAG ATA CTGCAA AGAAACTGTACAGCT TVN0202 207459 - 208121 + | glutaredoxin TVN0203 208360 - 208593 + | hypothetical protein TVN0204 208707 - 209075 + | hypothetical protein TVN0205 209230 - 210789 + | sugar-binding protein TVN0206 210797 - 211687 + | ABC-type sugar transporter, permease component TVN0207 211689 - 212495 + | sugar permease TERM 106 213122 - 213094 - g 70 -2.5 -5.03713 | opp_overlap 213089, overlap 213085 213084 AACAATTAAATAAAA CATTTATTTATGT AAC ACATGATCAAATG GAGGCAATGTCACTT TVN0208 212538 - 213590 + | ABC-type sugar transporter, ATPase component TERM 107 217554 - 217534 - g 79 -3.3 -5.33405 | overlap 217535 TGGACGAAATAAAAA CTGAGATAA GGG TAATCTCAA AAAATATAATAGGTA TVN0209 215286 - 218327 + | Alpha-mannosidase TVN0210 219152 - 218796 - | transcription regulator TERM 108 219551 - 219540 - g 70 -7.2 -3.82218 | ACTGATATTATGAAA GCCG GGGA CGGC TACAAAATAAATGGC TVN0211 219258 - 219791 + | hypothetical protein TVN0212 219794 - 220708 + | Pirin-related protein TVN0213 221772 - 220714 - | transcription regulator TVN0214 222171 - 221806 - | hypothetical protein TVN0215 222256 - 222861 + | hypothetical protein TVN0216 224106 - 222877 - | major facilitator superfamily permease TVN0217 224208 - 226058 + | glycosidase TVN0218 227999 - 226399 - | amino acid transporter TERM 109 226525 - 226512 - G 73 -3.9 -5.06816 | opp_overlap 226512 AGGCTCCAAGAAAAA TGTAT CCTG ATACA TAATGTTCATTGTAT TERM 110 226928 - 226917 - G 78 -4.4 -5.17786 | TAACAAAATTAAAAA GAAG CGCT CTTC GTGGGATCCCTGTGT TVN0219 229287 - 228061 - | multidrug efflux permease TERM 111 229108 - 229091 - G 74 -7 -4.27886 | overlap 229104 CCGTAAACAGAGAAA GGCAGT GCTATA ACTGCC GTAAGGAAGAAAAGC TVN0220 229963 - 229397 - | hypothetical protein TVN0221 230102 - 230905 + | Signal peptidase I TERM 112 230912 - 230895 - T 71 -8.5 -3.09012 | opp_overlap 230894, overlap 230894 AAATTAAAAAAAAGG TGAAGGT TTAA ACCTTCA GTGTTGGCTCTCCCT TVN0222 231426 - 230902 - | peroxiredoxin TVN0223 231588 - 232268 + | cell wall biosynthesis glycosyltransferase TVN0224 233466 - 232273 - | major facilitator superfamily permease TVN0225 233580 - 233939 + | hypothetical protein TVN0226 235228 - 233936 - | major facilitator superfamily permease TERM 113 234139 - 234149 + g 73 -8.2 -3.58536 | opp_overlap 234131 GTAGAGAGTTGTATA GGCC GAT GGCC TTTCCACGTGCCTTT TERM 114 234645 - 234669 + g 79 -10.8 -3.19389 | opp_overlap 234637, overlap 234664 CTAAAAGTATGCAGG GGCACATCAT TCCTT GTGATGTGCC TTCCTGGCTCACTTA TVN0227 238018 - 235331 - | chromosome segregation protein TERM 115 236843 - 236856 + g 70 -5.3 -4.56642 | opp_overlap 236843 CAAGATTTCAGAAAT GAATG CACT CATTC TTTCTATTTCTTTTT TVN0228 239114 - 238008 - | DNA repair exonuclease TVN0229 240694 - 239138 - | ATPase TVN0230 241661 - 240654 - | hypothetical protein TERM 116 240701 - 240714 + gH 71 -6.7 -4.21768 | opp_overlap 240700 240701, overlap 240699 TTGTTTCATAAAATG GGAGA CCTA TCTCC TTTTCAAATTCCTTC TERM 117 241466 - 241480 + gH 75 -5 -4.87318 | opp_overlap 241462, overlap 241462 241468 TTGAAAATTCACTGC TGTCTG TAG CAGATA TTTTTAAATTTTCAG TVN0231 241856 - 242719 + | 3-hydroxyisobutyrate dehydrogenase TERM 118 243564 - 243546 - g 75 -8.8 -3.67775 | opp_overlap 243546 AGGCGGATCCAATAA GCCAACGA TTC TCGTAGGC TCGGTTACGACTGCA TVN0232 242725 - 244368 + | NADH:flavin oxidoreductase TVN0233 245435 - 245034 - | hypothetical protein TVN0234 246671 - 245889 - | Zn-ribbon domain-containing protein TERM 119 246260 - 246229 - G 83 -9.5 -3.95535 | gap 1, opp_overlap 246236, overlap 246227 AGAAGTGTAAAAAGA GCAATGGGACCAGG TACGC CCTGG-CCTATTGC AAGCGCATCTAACAC TVN0235 247223 - 246963 - | hypothetical protein TVN0236 247285 - 247983 + | DNA-binding protein TERM 120 247992 - 247978 - f 75 -7.2 -4.2717 | ATGATGGGAGGAAAA GAATAG CTG CTATTC TCGAAAAGCCTTAAA TERM 121 250836 - 250851 + G 77 -10.4 -3.12327 | opp_overlap 250834 250833, overlap 250835 250847 250848 250850 TACCATTAAAATTCT CCTGCC ACCA GGCAGG TATTCGATCTACGCA TVN0237 248059 - 251055 + | thermopsin TVN0238 251597 - 251088 - | hypothetical protein TERM 122 252686 - 252676 - g 70 -2.6 -4.92385 | CAGAGGTAAAGAAAA TATA CGA TATA GCCACAAAGTTGGAG TVN0239 251796 - 252956 + | methylcitrate synthase TVN0240 253285 - 252968 - | hypothetical protein TVN0241 253969 - 253583 - | hypothetical protein TVN0242 254161 - 253982 - | hypothetical protein TERM 123 254324 - 254352 + H 72 -4.7 -4.78752 | overlap 254326 TGTTATGAAAAATGA TGTGAGTTTATAG TTC CTATAAATACATA TTTTTACATTATGCT TERM 124 255517 - 255506 - g 73 -5.8 -4.56883 | overlap 255516 TTAACAGCAAAGAAA GGCT AACA AGCC CCCTAATAAGGGATG TVN0243 254542 - 257496 + | hypothetical protein TVN0244 257661 - 257960 + | hypothetical protein TVN0245 257957 - 258796 + | hypothetical protein TVN0246 258863 - 260158 + | major facilitator superfamily permease TVN0247 261216 - 260458 - | SAM-dependent methyltransferase TVN0248 261621 - 262802 + | transposase TVN0249 262873 - 263349 + | HIT (histidine triad) family protein TVN0250 263385 - 264527 + | major facilitator superfamily permease TVN0251 265904 - 264489 - | mercuric reductase TERM 125 265184 - 265201 + g 74 -9.9 -3.14051 | opp_overlap 265181, overlap 265183 265197 CTCCTCCAGACACCT CATCCAC TGAA GTGGATG TATTGATAACCATAC TVN0252 266118 - 265894 - | copper chaperone TVN0253 266253 - 266639 + | hypothetical protein TVN0254 267720 - 266641 - | membrane-associated Zn-dependent protease 1 TERM 126 267250 - 267239 - G 70 -3.6 -4.74653 | opp_overlap 267239 AAAGGAATAAAGAAA GGCA GCGA CGCC TTCACGTGATGCCTT TVN0255 269367 - 268261 - | major facilitator superfamily permease TERM 127 268589 - 268579 - G 100 -4 -5.94597 | opp_overlap 268579 GAATATGAAAAAAAA TATC GAA GATA TTATTGTGACTACCG TERM 128 269117 - 269091 - G 83 -11.8 -2.74605 | overlap 269088 TTTTTTCAAAAGCCA TTGCAATAGAAA GTA TTCCTATTGCAA ACATCGAATAGGAGA TVN0256 269460 - 270671 + | multidrug efflux permease TVN0257 271280 - 270675 - | phosphoglycerate mutase TERM 129 271092 - 271128 + g 73 -3.8 -4.98531 | gap 1 TGCTATTATCTCTGC TGT-TTCTCTGGCCC TGTTTATT GGGCTAGAGTACACA TTTTTAATTTCCAGA TERM 130 271161 - 271177 + g 70 -7.9 -3.63073 | TGTAAGCTGATCCCT GGCATGC TCG GCCTGCC TTATTCCGCGCTCTG TVN0258 272783 - 271512 - | hypothetical protein TERM 131 271979 - 271991 + g 70 -7.7 -3.64283 | GAGTTCTGCGCCGAA CTTCC ATT GGAAG TTGTTCAAAAGTTTC TVN0259 272984 - 273901 + | carbamate kinase TVN0260 274541 - 273888 - | phosphoribosyltransferase TVN0261 275033 - 274704 - | NTP pyrophosphohydrolase TERM 132 275151 - 275174 + H 70 -8.2 -3.19003 | opp_overlap 275144 275157, overlap 275152 275157 275169 275171 GCAAATAATGGCCTC ACCAAACATC AATG GATGTTTGGC TTCCTGCCATATTCT TERM 133 275152 - 275173 + H 82 -11.7 -2.5092 | opp_overlap 275144 275157, overlap 275151 275157 275169 275171 CAAATAATGGCCTCA CCAAACATC AATG GATGTTTGG CTTCCTGCCATATTC TERM 134 275656 - 275644 - H 80 -2.7 -5.61689 | AAAATCAAGAAAAAA TTGAC AAC ATCAA ATAATGAAAAGTATT TVN0262 275700 - 276764 + | geranylgeranyl pyrophosphate synthase TVN0263 277612 - 276761 - | integrase/recombinase TVN0264 277703 - 278338 + | ribulose-phosphate 3-epimerase TVN0265 279302 - 278316 - | alcohol dehydrogenase TVN0266 279911 - 279375 - | hypothetical protein TERM 135 279552 - 279534 - G 71 -4.6 -4.72272 | TCCGGGCATCAAAAA TTCAAGAA TAA CCCTTGAA AATAAAGAAACTGCC TERM 136 279727 - 279697 - G 70 -7.1 -3.80419 | gap 1 AGTACAGAGTAATAA TAGTACTGTGTGGA GAAA TCCA-ACAATACTA GAATTACGGTTAGAA rpl40e 280069 - 280218 + | 50S ribosomal protein L40e TERM 137 280269 - 280242 - g 77 -6.2 -4.62872 | overlap 280229 280233 AGCAATCTCCAAAAA TTGGCATCCTCC TTAT GGAGGGAACCAA CAACGAAACCGAAGT TVN0268 280223 - 280999 + | phosphoribosylformylglycinamidine synthase subunit I TERM 138 282103 - 282093 - g 71 -6.8 -4.18018 | CGGCTTCATTCAAAA CTCC CAA GGAG CCCATTCAACGGCAT TVN0269 280992 - 282239 + | dihydroorotase TVN0270 282820 - 282227 - | RNA methylase TVN0271 283125 - 282820 - | hypothetical protein TERM 139 282859 - 282877 + g 82 -6 -4.94058 | GAGATCAATAATTTC CTTTGCTA TTC TGGCAGAG TTTTCTTTAGATTCG TVN0272 284192 - 283269 - | ornithine carbamoyltransferase TVN0273 285046 - 284189 - | succinyl-CoA synthetase subunit alpha TERM 140 284870 - 284882 + g 70 -7.7 -3.66178 | TTCATACTGCATAGC CTCAG CAA CTGAG TTTACAATTGGCACC sucC 286144 - 285047 - | succinyl-CoA synthetase subunit beta TERM 141 285333 - 285349 + g 70 -7.3 -3.89215 | opp_overlap 285333, overlap 285334 TCTGTACCCCCAAGA TCAAGGA AGT TCCTTGG TTTACCTTTATGAAG TERM 142 287011 - 287034 + r 75 -9.6 -2.59431 | overlap 287006 CTTAACCTTACGTAC TTGGTTTCCG TCAG CGGAAGCCAG TCAGTTATACGAACA TERM 143 287765 - 287731 - R 78 -2.3 -5.62552 | gap 1, opp_overlap 287732 287737 287760, overlap 287732 AAAAAAAGTAAAAAA TCTTAGCTAGAAGTAC ACTA GTATTTCTAG-TAAGT TTTACATTACTTTCA TERM 144 287732 - 287764 + r 83 -8 -4.33808 | gap 1, opp_overlap 287731 287732, overlap 287737 287760 AAAAAAGTAAAAAAT CTTAGCTAGAAGTAC ACTA GTATTTCTAG-TAAG TTTTACATTACTTTC TERM 145 288120 - 288106 - R 73 -4.4 -4.94972 | overlap 288111 TACTAGAATTAAAAA TAAATT TAA AATTTA AGCTAACGCATCATT TVN0275 289470 - 288250 - | hypothetical protein TVN0276 292433 - 291894 - | hypothetical protein TVN0277 293121 - 292522 - | hypothetical protein TVN0278 293611 - 293838 + | hypothetical protein TVN0279 294100 - 293828 - | RNAse P protein subunit RPR2 TVN0280 294141 - 294815 + | phosphoglycolate phosphatase TVN0281 295648 - 294833 - | solute-binding protein TVN0282 295743 - 296525 + | hypothetical protein TVN0283 297936 - 296872 - | ABC-type Fe3+-siderophores transporter, permease component TERM 146 297786 - 297772 - G 71 -5 -4.68424 | opp_overlap 297777, overlap 297777 CAATGCATTTAAAAA TGGAAT TTG ATCCCA AATTATTTCAGCAGT TERM 147 297888 - 297870 - G 73 -8.2 -3.62762 | opp_overlap 297870 297866, overlap 297880 AAGCAAGAAGTATAA TTGACAGA TAG CCTGTCAA TGACTTGCCTATTCG TVN0284 298043 - 299008 + | ABC-type Fe3+-siderophores transporter, solute-binding component TVN0285 300628 - 299333 - | arsenite transport permease TVN0286 301132 - 300659 - | peroxiredoxin TERM 148 300803 - 300829 + g 75 -5.8 -4.59293 | overlap 300805 AAGGCCAGGCACGCC TGCGAAGTTCTG GTG CAGCACATCGTA TTTCTTTGATATTTC TERM 149 301142 - 301158 + r 73 -9.4 -2.87963 | opp_overlap 301154 AGACATTTTATCCCT CTGGCC AAACA GGCCAG TCTGATCATTATACC TVN0287 302822 - 301512 - | adenylosuccinate synthetase TVN0288 302996 - 303364 + | glycine cleavage system protein H TERM 150 303425 - 303406 - g 78 -4.2 -5.09426 | opp_overlap 303416, overlap 303409 TGGAAGGCTAAAAAA GAACAGCT TCGT AGCCGTGC TGCTTTTAAATTAGA TERM 151 303422 - 303409 - g 71 -4.5 -4.63993 | opp_overlap 303416, overlap 303406 AAGGCTAAAAAAGAA CAGCT TCGT AGCCG TGCTGCTTTTAAATT TVN0289 303361 - 303954 + | methyltransferase involved in cell division TVN0290 304567 - 303941 - | hypothetical protein TVN0291 305502 - 304564 - | hypothetical protein TVN0292 305692 - 306138 + | Fe2+ uptake regulation protein TVN0293 307212 - 306280 - | GMP synthase subunit B TERM 152 306534 - 306557 + g 82 -4.6 -5.40464 | gap 1, overlap 306535 ACTGCCATGGTCTTG ATTCAGATGGC ATT GCC-TCTGAAA TTTTTCTTTCTACTA TERM 153 306535 - 306556 + g 72 -8.1 -3.82652 | gap 1, overlap 306534 CTGCCATGGTCTTGA TTCAGATGGC ATT GCC-TCTGAA ATTTTTCTTTCTACT TERM 154 307218 - 307208 - G 73 -5.4 -4.67234 | ATGTAATCGGAAAAA CTCA TTT TGAG CTATTAAAAAAATGG TVN0294 307576 - 307259 - | hypothetical protein TVN0295 307819 - 307586 - | transcription regulator TERM 155 308238 - 308224 - g 73 -2.8 -5.243 | overlap 308226 GAAACTAGGAAAAAA GATTCT TAT AGAAAC AAACGGAACCGTCCC TVN0296 307952 - 308581 + | organic radical activating protein TVN0297 308639 - 309943 + | glycine dehydrogenase subunit 1 TVN0298 309940 - 311358 + | glycine dehydrogenase subunit 2 TVN0299 311426 - 312436 + | heme d1 biosynthesis protein (NirJ-related) TVN0300 312896 - 313402 + | hypothetical protein TVN0301 314239 - 313409 - | metal-dependent hydrolase TERM 156 313581 - 313595 + g 89 -7.2 -5.00616 | opp_overlap 313581 313579 TCGTCTATAAAATCA GTTTCT AGA AGAAAC TTTTTTGACAGCGCC TERM 157 314267 - 314287 + r 78 -6.9 -4.37886 | overlap 314269 ATAGTTGTCTGTCAA CGTTTTCTG AGT CATAAAACG TTTTATGACCGGTGA TVN0302 315463 - 314249 - | hypothetical protein TERM 158 314374 - 314387 + g 76 -8.1 -4.23707 | CGAATATAGCTGGTT TGCCC TTAA GGGCA TTTCTTACGCTTTCT TVN0303 316917 - 315520 - | phosphate ABC transporter permease TERM 159 317096 - 317110 + G 86 -10 -3.96618 | GCGATAACGGTATTC TCTCCC GAC GGGAGA TTATTTCAAGTTGAA TVN0304 317051 - 317752 + | proteasome subunit alpha TVN0305 317790 - 318482 + | putative RNA-associated protein TVN0306 318533 - 319243 + | exosome complex RNA-binding protein Rrp4 TVN0307 319203 - 319949 + | exosome complex exonuclease Rrp41 TVN0308 319952 - 320734 + | exosome complex RNA-binding protein Rrp42 rpl37ae 320740 - 320982 + | 50S ribosomal protein L37Ae TVN0310 320979 - 321116 + | DNA-directed RNA polymerase subunit P TERM 160 321305 - 321327 + G 79 -3.4 -5.33026 | CTGTGAGATTTGCCA CGGTATATTT GAT AAATTTTCCG TTTTTCTTTCACTTG TVN0311 321120 - 322286 + | pseudouridylate synthase TVN0312 322289 - 322585 + | 50S ribosomal protein L21e TERM 161 322805 - 322793 - g 82 -10.5 -3.60098 | ATTCTTGATCTTAAA CCGGG GAC CCCGG CAGATATAACATCTA TVN0313 322589 - 322900 + | hypothetical protein TERM 162 323101 - 323090 - g 75 -2.2 -5.24989 | GTATATAGGAAAAAA CCCA GAGA TGAG GAAGAAAATTCTCTC TVN0314 322914 - 323462 + | RNA-binding protein TVN0316 324941 - 324117 - | membrane protease subunit TVN0315 323459 - 324172 + | rRNA dimethyladenosine transferase TERM 163 324213 - 324201 - Gf 72 -4.7 -4.73682 | overlap 324208 TCCCATAACAGAAAA GGCAG AAC CGGCC ACTGGTACATCTGAC TERM 164 325262 - 325278 + FH 70 -2.3 -5.27923 | opp_overlap 325262 AGATAGAGAAAAATG GATATTT ATG AATTATC TTTTTTATAGACTTC TVN0317 326039 - 326443 + | transcription regulator TVN0318 326520 - 326903 + | hypothetical protein TERM 165 327088 - 327072 - g 74 -4.4 -4.99568 | GAAGAGGAAATAAAA GGACCA GCTCT TGATCC GAAACTTGTGGTTTA TVN0319 326994 - 327161 + | preprotein translocase subunit SecG TVN0320 328128 - 327166 - | mevalonate pyrophosphate decarboxylase TERM 166 327317 - 327330 + g 75 -5.3 -4.82518 | CCGGTAACTATATAT GAGTT CCAG AACTC TTTTCTTAGTATTTT TVN0321 328339 - 329157 + | hypothetical protein TVN0322 329566 - 331095 + | membrane-associated Zn-dependent protease 1 TVN0323 331403 - 331810 + | hypothetical protein TERM 167 331811 - 331788 - f 73 -9 -3.17941 | opp_overlap 331794, overlap 331779 331794 AGCAGATGGCAGGAA GCCAAATATC AATG GATATTTGAC AAAGCCCATAAACGC rpl3p 332231 - 333226 + | 50S ribosomal protein L3P rpl4lp 333223 - 333990 + | 50S ribosomal protein L4P rplW 333990 - 334241 + | 50S ribosomal protein L23 rpl2p 334250 - 334954 + | 50S ribosomal protein L2P rps19p 334941 - 335396 + | 30S ribosomal protein S19P rpl22p 335393 - 335848 + | 50S ribosomal protein L22P rps3p 335845 - 336522 + | 30S ribosomal protein S3P rpmC 336449 - 336649 + | 50S ribosomal protein L29 TERM 168 336850 - 336836 - g 80 -2.7 -5.5074 | GAATTGAAGAAAAAA GTCGC TTCAG GCGGC ACCGTGAAGGAAGGA TVN0332 336650 - 336952 + | translation initiation factor Sui1 TVN0333 336949 - 337218 + | ribonuclease P protein component 1 rps17p 337220 - 337549 + | 30S ribosomal protein S17P TERM 169 337793 - 337778 - g 70 -5.4 -4.50943 | TAATAAGGCAGAAAA GACCTT ATAG AAGGCC TGATGGCACAATGGT rpl14p 337546 - 337944 + | 50S ribosomal protein L14P rpl24p 337953 - 338390 + | 50S ribosomal protein L24P TVN0337 338380 - 339087 + | 30S ribosomal protein S4e rpl5p 339084 - 339596 + | 50S ribosomal protein L5P rps14P 339601 - 339762 + | 30S ribosomal protein S14P rps8p 339772 - 340161 + | 30S ribosomal protein S8P rpl6p 340175 - 340711 + | 50S ribosomal protein L6P rpl32e 340713 - 341099 + | 50S ribosomal protein L32e rpl19e 341109 - 341558 + | 50S ribosomal protein L19e rpl18p 341564 - 342046 + | 50S ribosomal protein L18P TERM 170 342144 - 342133 - g 74 -4.4 -5.07652 | overlap 342134 GCGCTTAAAACAAAA CTTC CATT GAAG GAATATGAGATAGTA rps5p 342043 - 342708 + | 30S ribosomal protein S5P rpl30p 342686 - 343183 + | 50S ribosomal protein L30P rpl15p 343164 - 343601 + | 50S ribosomal protein L15P TERM 171 343747 - 343727 - g 71 -8.3 -3.48593 | opp_overlap 343719 CACTTTTCTATATAA CGTATCTAG TTG CTAGCTACG CAGGCCCAAAGAAAA TVN0348 343579 - 345339 + | preprotein translocase SecY TVN0349 345340 - 345885 + | adenylate kinase TVN0350 345882 - 346559 + | hypothetical protein TVN0351 346556 - 347128 + | cytidylate kinase TVN0352 347179 - 348240 + | H/ACA RNA-protein complex component Cbf5p TVN0353 348263 - 348814 + | Nop56p-related protein (ribosomal biogenesis) TVN0354 350225 - 348801 - | amidophosphoribosyltransferase TERM 172 349400 - 349419 + gT 81 -10.8 -2.89191 | CCATGTTTACCCTGG CGGCATAA ACGT TTATGCCG TCTATAACGCTATCC rpl37e 350337 - 350173 - | 50S ribosomal protein L37e TVN0356 350585 - 350334 - | small nuclear ribonucleoprotein TVN0357 350720 - 351553 + | nucleoside-diphosphate-sugar epimerase TVN0358 352022 - 351555 - | hypothetical protein TERM 173 352512 - 352502 - g 71 -3.2 -4.96996 | GTTAAAGAAAATAAA TCCA GTC CGGA AAAAAGATAAGCCCC TVN0359 352110 - 353009 + | translation elongation factor (GTPase) TVN0360 353081 - 353785 + | hypothetical protein TVN0361 354006 - 355256 + | hypothetical protein TVN0362 355283 - 357232 + | polyferredoxin TVN0363 357873 - 357199 - | enoyl-CoA hydratase TVN0364 357925 - 358554 + | DNA-binding protein TVN0365 359065 - 358547 - | hypothetical protein TERM 174 359614 - 359591 - g 81 -7.4 -4.65722 | overlap 359610 GGATATACAAATAAA GCCGGTTTCT GTAA AAATACCGGC AACAGGCAAGACGTA TVN0366 359295 - 360023 + | Rieske Fe-S protein TERM 175 360105 - 360088 - g 71 -4.8 -4.65032 | overlap 360089 GAAATTATAAATAAA CCTGAG CCGCTC CCCAGG AGAGTTCCAGATTAC TVN0367 360034 - 361647 + | cytochrome b subunit of the bc complex TVN0368 362531 - 361650 - | carboxyphosphonoenolpyruvate phosphonomutase TVN0369 363846 - 362515 - | hypothetical protein TVN0370 364788 - 363970 - | Sec-independent protein secretion pathway component (TatC-related) TVN0371 365080 - 364778 - | Sec-independent protein secretion pathway component TERM 176 366258 - 366247 - g 70 -5.8 -4.371 | opp_overlap 366257 GGTAGTAGACGAAAA CCTC TCTG GAGG TACAGAATTACCTTT TVN0372 365507 - 366346 + | Rieske Fe-S protein TERM 177 366508 - 366520 + G 81 -4.1 -5.33124 | GTTGCTTATTTGGCG GTATC AGG GATGC TTTTATTTTATTATT TVN0373 366349 - 367524 + | cytochrome b subunit of the bc complex TVN0374 367521 - 367712 + | hypothetical protein TVN0375 367751 - 368053 + | hypothetical protein TVN0376 368053 - 368277 + | hypothetical protein TVN0377 368801 - 368274 - | transcription regulator TVN0378 369104 - 368934 - | transcription regulator (HTH) TVN0379 371058 - 369160 - | ATPase TVN0380 371671 - 371051 - | hypothetical protein TERM 178 371491 - 371481 - G 76 -6.8 -4.5123 | opp_overlap 371488 AACCTAGTAAAGAAA CTCC TTA GGAG CTCATAGGCGCCATT TVN0381 371934 - 372401 + | hypothetical protein TVN0382 372394 - 373521 + | ATPase of the AAA+ class involved in cell division TVN0383 373629 - 374267 + | coiled-coil domain-containing protein TVN0384 374674 - 374366 - | hypothetical protein TVN0385 374780 - 375766 + | homoserine dehydrogenase TVN0386 375941 - 376753 + | ABC-type nitrate transporter, ATPase component TVN0387 376750 - 378375 + | ABC-type nitrate transport permease TVN0388 378848 - 378387 - | hypothetical protein TERM 179 378441 - 378473 + g 80 -11.4 -2.66787 | gap 1, opp_overlap 378431 378440 378432, overlap 378432 AAGAACCCCAAGCAG GGCCA-TACCCAACG CCCA CGTTGCGTAGTGGCC TGATATGGATCTTGC TVN0389 379201 - 378908 - | hypothetical protein TVN0390 379541 - 380506 + | dehydrogenase TVN0391 380519 - 380863 + | hypothetical protein TVN0392 381372 - 380902 - | hypothetical protein TERM 180 382645 - 382673 + G 74 -7.6 -4.04295 | opp_overlap 382650 TCCAGGCGAGAGACC GATAACAATATG GAATA CATATTGTTCTC TTTAGTTATAATTGC TVN0393 382012 - 383193 + | Kef-type K+ transport system, membrane component TERM 181 383326 - 383343 + T 79 -8.3 -3.92746 | overlap 383325 ATTCTGACCTCCTTC CCCGCCC TAAA GGGCGAG TGTTTTTCCAATCGA TVN0394 384816 - 383770 - | major facilitator superfamily permease TVN0395 385512 - 385916 + | sterol carrier protein TERM 182 386400 - 386388 - g 86 -2.7 -5.80003 | GGAAGAAAGAAAAAA TGAAA TAG CTTCA CCTGAGATAATGGCT TVN0396 385927 - 387048 + | alcohol dehydrogenase IV TVN0397 387045 - 388541 + | NAD-dependent aldehyde dehydrogenase TVN0398 389749 - 388568 - | 2-amino-3-ketobutyrate coenzyme A ligase TERM 183 389138 - 389156 + g 73 -7.4 -4.10657 | ATGTGCATCATCTAC GTACGTCA TTA TGTCGTAC TTTTCAGCAATATCA TERM 184 389556 - 389569 + g 78 -2.3 -5.42514 | overlap 389548 CCATATTCTTCTATA GCTTC AATA GCAGC TTTTTTAGTTTCTGG TERM 185 389655 - 389667 + g 72 -6.2 -4.30911 | opp_overlap 389655 TTTATCTTGACCCAA GCGC CCTGT GCGC TTTCTATTGTCCTTA rps2P 389981 - 390580 + | 30S ribosomal protein S2 TVN0400 391704 - 390826 - | tRNA splicing endonuclease TVN0401 392212 - 391697 - | GTPase TERM 186 392537 - 392510 - g 100 -10 -5.07053 | gap 1 AATTATGGCAAAAAA GCCCTTCAGTATG GAA CA-ACTGAAGGAC TAGACGTTTTGAGAG TERM 187 392713 - 392693 - g 70 -7.6 -3.59946 | gap 1 CCTGTAATTACAGAA GGC-CCAAC GTAC GTTGGTGCC ATATCGGCCTTTAAT TVN0402 392327 - 393535 + | transcription regulator TVN0403 393600 - 394586 + | fused phosphopantetheine adenylyltransferase/unknown domain-containing protein TVN0404 395457 - 394567 - | Ca2+/Na+ antiporter TVN0405 395866 - 395474 - | S-adenosylmethionine decarboxylase proenzyme TVN0406 396809 - 396051 - | transcription regulator ubiA 397721 - 396861 - | prenyltransferase TVN0408 399175 - 397730 - | 4-hydroxybenzoate decarboxylase TVN0409 400561 - 399197 - | cobyrinic acid a,c-diamide synthase TVN0410 401313 - 400558 - | hypothetical protein TVN0411 401473 - 401285 - | H/ACA RNA-protein complex component Nop10p TVN0412 402234 - 401470 - | translation initiation factor IF-2 subunit alpha rps27e 402428 - 402231 - | 30S ribosomal protein S27e rpl44e 402712 - 402431 - | 50S ribosomal protein L44e TERM 188 402882 - 402913 + r 73 -3.8 -5.0538 | gap 1, overlap 402883 402884 AATAACGGTATTTAC GTTTGTGT-ATGCCT ATA AGGCATGACACAGGA TTTTTTAACATCCGA TVN0415 403690 - 403403 - | hypothetical protein TVN0416 404043 - 404408 + | hypothetical protein TVN0417 405222 - 404401 - | spermidine synthase TERM 189 406010 - 406038 + G 71 -6.7 -4.15854 | TCCTTTGGTTCTCAG TTGTGGAGCTTTT ACG AACAGCACCACGA TTTTAAAATAAATTT TVN0418 405413 - 406345 + | putative deoxyhypusine synthase TVN0419 406476 - 406934 + | peroxiredoxin TERM 190 406947 - 406929 - T 84 -11.8 -2.62616 | opp_overlap 406928 CTAGGCCTTATACCA TCCTGATC GTT GATCAGGA ATAACTTTTTTCTTC rpl12p 407436 - 407122 - | 50S ribosomal protein L12P rplP0 408394 - 407450 - | acidic ribosomal protein P0 rpl1P 409044 - 408391 - | 50S ribosomal protein L1P rpl11p 409535 - 409059 - | 50S ribosomal protein L11P TERM 191 409885 - 409871 - g 70 -5.6 -4.27259 | overlap 409872 CACATACACCGAAAA GCCAGG TTA CCTGGT AAAAGCCAATAAAGC TVN0424 409698 - 410258 + | intracellular protease TERM 192 410764 - 410779 + G 70 -7.6 -3.65656 | AACGCCTTCAAGGTG CTTCCT ACAG AGGAAG TTATATCTATAGTGG TVN0425 410584 - 411609 + | hypothetical protein TVN0426 412771 - 411662 - | mevalonate pyrophosphate decarboxylase TERM 193 412218 - 412258 + g 71 -8.3 -3.53012 | opp_overlap 412212, overlap 412213 412220 412227 ATGGATATACCGCTG TGTGCAGCCCTTGTACCCG ATC CGGATACAAGTCTTGCATA TTTCGAAACGAAGAC TERM 194 412220 - 412256 + g 71 -8.7 -3.34398 | opp_overlap 412212, overlap 412213 412218 412227 GGATATACCGCTGTG TGCAGCCCTTGTACCCG ATC CGGATACAAGTCTTGCA TATTTCGAAACGAAG TERM 195 412227 - 412249 + g 77 -10.6 -3.182 | overlap 412220 412218 CCGCTGTGTGCAGCC CTTGTACCCG ATC CGGATACAAG TCTTGCATATTTCGA TERM 196 412438 - 412468 + g 71 -4 -4.84527 | opp_overlap 412440, overlap 412440 ATTCCTTCCTGAAAT AATCTAAGGCAAAC TTA GCTTTCCTTAGATA TTTTTCGTCTGTGAC TERM 197 412466 - 412440 - G 78 -8.8 -3.90744 | opp_overlap 412440 412438 TCCTTCCTGAAATAA TCTAAGGCAAAC TTA GCTTTCCTTAGA TATTTTTCGTCTGTG TERM 198 413137 - 413123 - H 70 -4.4 -4.7329 | AAAATCATTGAAAAA TTATAT GAA ATATAA AGAAATATTATATTC TVN0427 414098 - 414403 + | hypothetical protein TVN0428 417271 - 415361 - | hypothetical protein TERM 199 415454 - 415466 + g 86 -9.1 -4.24786 | AACAGAGAGAGGTTG CCCGT TGT ACGGG TTTATCTGTTCTGAA TERM 200 416556 - 416578 + g 70 -5.6 -4.3587 | CTCTTTACCAATTTC CTTATGTACC TGA GGTCTATAAG TTTGTATTCTTCCTC TERM 201 418410 - 418397 - g 79 -3.1 -5.39721 | opp_overlap 418403 TGAGTATACAAAAAA CAAGG CTTT CCTTA GGGAAATGTATAATA TVN0429 417372 - 419177 + | glycogen debranching protein TERM 202 420075 - 420126 + G 81 -7.4 -4.62069 | gap 1, opp_overlap 420087, overlap 420087 GAACGCCGGTAATAC TTAGTAGAACGACGGGTGTTGGAGA AGC TCTCCATCACGTG-CTTTCTGCTGA TTTTTGGGATACCGA TVN0430 419174 - 420283 + | glycosyltransferase TERM 203 421002 - 420983 - g 75 -8.6 -3.79747 | TTATGGACTATGAAA CGTTTGGC GAGC ACCAAACG CAGGAAACAGGCATT TVN0431 420280 - 421416 + | Alpha-amylase TVN0432 421440 - 422264 + | asparaginase TVN0433 422270 - 422635 + | hypothetical protein TVN0434 423014 - 422661 - | hypothetical protein TVN0435 424040 - 423096 - | nucleoside-diphosphate-sugar pyrophosphorylase TERM 204 425257 - 425270 + G 71 -4.5 -4.58563 | AGATAAGCACACTTT TGCCG GTTG TGGCA TTCTTTTTCTCCTTC TVN0436 424218 - 425555 + | major facilitator superfamily permease TVN0437 426886 - 425663 - | RNA processing exonuclease TVN0438 427665 - 426892 - | 5'-methylthioadenosine phosphorylase II TERM 205 427715 - 427688 - R 70 -7.2 -3.84304 | overlap 427686 CGAATCCATAAAAGA CTCTAAAACAAA AACC TTCGTTTTAAAG CTGTGCTAAAATAGC TVN0439 428431 - 427721 - | asparagine synthase TVN0440 428481 - 430262 + | ATPase TVN0441 430273 - 430785 + | hypothetical protein TVN0442 431825 - 430782 - | adenine-specific DNA methylase TERM 206 431636 - 431653 + g 71 -9.9 -2.73007 | opp_overlap 431634, overlap 431635 TTGTATGTGAAGAGG CGATCCT TTGT AGGATCG ATTTAAGCACATCTT TERM 207 431989 - 431976 - H 84 -3.8 -5.626 | opp_overlap 431976 TATTTTAGAAAAAAA GGGA AAAACA TCCC ATTAATATCGTTTAT TVN0443 432246 - 432380 + | peroxiredoxin fragment (inactivated) TVN0444 432540 - 432809 + | peroxiredoxin fragment (inactivated) TERM 208 432857 - 432847 - T 77 -5.4 -4.98352 | AGGAAACAAAAGAAA CATC AAG GATG AAAGAGGCAGATTAA TVN0445 434393 - 433464 - | ATPase TVN0446 434747 - 434445 - | hypothetical protein TVN0447 434910 - 435626 + | DNA-binding protein TVN0448 435696 - 436799 + | dehydrogenase rpl7ae 437191 - 437556 + | 50S ribosomal protein L7Ae rps28e 437567 - 437776 + | 30S ribosomal protein S28e TERM 209 437831 - 437821 - g 73 -8.2 -3.68757 | GGGAAAACCATAGAA CCCG GCA CGGG CATAATGTACGTACG TVN0451 437779 - 437979 + | 50S ribosomal protein L24e TVN0452 437979 - 438422 + | nucleoside diphosphate kinase TERM 210 438458 - 438491 + G 75 -9 -3.72315 | gap 1, opp_overlap 438457, overlap 438456 GGCAACCTATAGTAT GTGTTCTTGGCCATG TCGAC CATGG-CAAGACCAC TCTTTTGGATATAAT TVN0453 438400 - 440169 + | translation initiation factor IF-2 TERM 211 440484 - 440458 - T 71 -6.7 -4.12899 | gap 1, opp_overlap 440465, overlap 440463 ATCACAAGGAAATAA GATCAGAGGGCA TGTT TACCCTCT-ATC CCGAGCTTTTCTGAT TVN0454 441413 - 440460 - | UDP-glucose 4-epimerase TERM 212 441880 - 441867 - g 71 -6.7 -4.16182 | overlap 441832 TCAGCACAAATTAAA GCCTT CAAT AAGGC CCGTAGAGTTAAAGA TVN0455 441622 - 442698 + | phosphoribosylaminoimidazole carboxylase ATPase subunit TVN0456 443236 - 442721 - | regulator of amino acid metabolism radA 444310 - 443339 - | DNA repair and recombination protein RadA TVN0458 445326 - 444310 - | glyceraldehyde-3-phosphate dehydrogenase TERM 213 449025 - 449015 - g 78 -4 -5.14949 | AATAAAACAATAAAA GAAT TAA ATTC AATTGGAAAATTAGA TVN0459 445619 - 449104 + | hypothetical protein TVN0460 449193 - 449738 + | hypothetical protein TVN0461 449750 - 450298 + | aromatic acid decarboxylase TVN0462 450261 - 450734 + | hypothetical protein TERM 214 450915 - 450902 - g 70 -5.3 -4.44608 | TCCAGGGAAAAAGAA CGAAT ACCA ATTCG GGTTACTATTGAAGT TVN0463 450731 - 451753 + | RNA-binding protein (pelota-related) TVN0464 452888 - 452430 - | restriction endonuclease S subunit fragment TVN0465 453140 - 452892 - | restriction endonuclease S subunit fragment TVN0466 453177 - 453806 + | hypothetical protein TVN0467 454984 - 454214 - | hypothetical protein TVN0468 456192 - 455305 - | hypothetical protein TERM 215 455480 - 455501 + g 70 -5.1 -4.52589 | ATCTCCCTACTCCCT CCCTGCTTA TGCC TAGCCAGGG TTTTCTGTGCGACAC TVN0469 456579 - 456214 - | hypothetical protein TERM 216 456640 - 456610 - H 79 -5.2 -5.07567 | opp_overlap 456613 456614 456628 456632, overlap 456614 CCAGAGTTTAAAAAA CTTACCCGGCCCCT AGA AGGGGCGAGGCTTG TCTCTCGTTTTTGTC TERM 217 456636 - 456614 - H 83 -11.2 -2.92513 | opp_overlap 456614 456613 456628 456632, overlap 456610 AGTTTAAAAAACTTA CCCGGCCCCT AGA AGGGGCGAGG CTTGTCTCTCGTTTT TERM 218 456725 - 456712 - H 74 -2.4 -5.52079 | ATACGAAAAGAAAAA CTGA CCCTCT TCAG ATATGTGGACATCCG TVN0470 456921 - 457223 + | thioredoxin reductase TVN0471 458142 - 457516 - | transcription regulator (HTH) TERM 219 457630 - 457609 - G 79 -11.7 -2.54371 | opp_overlap 457607, overlap 457614 AATCATGTCAAGTGA TAGGAGACT CTTT AGTCTCCTA GATATAGTAGAAGTA TERM 220 457658 - 457671 + g 81 -5.3 -5.093 | GTATCTATTTTTAAT GATCT TGAA AGATC TTTTATTGTTTTGGG TERM 221 458222 - 458237 + H 71 -3.4 -5.10968 | opp_overlap 458232, overlap 458232 CATAGAATAAATTTG TTTATA TACA TATAAA TTTTTATATATTGGT TVN0472 458260 - 459657 + | transporter component TERM 222 460748 - 460732 - g 71 -2.2 -5.21709 | opp_overlap 460732 TCTCAGATCAAAAAA TGGATG GGCTT CAACCA ATTTAAAGGATTTTA TVN0473 459941 - 461107 + | NAD(FAD)-dependent dehydrogenase TVN0474 461113 - 461535 + | hypothetical protein TERM 223 461553 - 461579 + T 73 -4.4 -5.02074 | opp_overlap 461554 461557, overlap 461554 461557 ATTCAAGTTTTCGAA AGGAGGAGAGAT TTA ATCTCTTCTGCA TTTTTTGGCGCATAA TERM 224 461554 - 461578 + T 71 -7.9 -3.60762 | opp_overlap 461554 461557, overlap 461553 461557 TTCAAGTTTTCGAAA GGAGGAGAGAT TTA ATCTCTTCTGC ATTTTTTGGCGCATA TVN0475 462262 - 461540 - | hypothetical protein TERM 225 463209 - 463186 - g 71 -4.7 -4.59773 | opp_overlap 463189 GCCTATCGGTAAAAA CAATTTACC AGAGAA GGTAAATTA TCACTGGACAGTTTC TVN0476 462512 - 463720 + | transporter component TERM 226 464010 - 464029 + T 79 -9.4 -3.37017 | opp_overlap 464010, overlap 464014 TTCGGATCAAAAAAA TTAATGGC TATT GCCATTAA TTCCTATTGAGAGTT TERM 227 464029 - 464010 - T 100 -9.4 -5.52384 | opp_overlap 464010 464014 TTCGGATCAAAAAAA TTAATGGC TATT GCCATTAA TTCCTATTGAGAGTT TVN0477 465282 - 464026 - | arginine deiminase TVN0478 466352 - 465345 - | NMD protein (ribosome stability and mRNA decay protein) TVN0479 466993 - 466379 - | hypothetical protein TVN0480 467069 - 468151 + | hypothetical protein TVN0481 468197 - 468499 + | hypothetical protein TVN0482 468661 - 468494 - | 30S ribosomal protein S27ae rps24e 468972 - 468673 - | 30S ribosomal protein S24e TVN0484 469484 - 468984 - | hypothetical protein rpoE 469656 - 469462 - | DNA-directed RNA polymerase subunit E'' TVN0486 470231 - 469653 - | DNA-directed RNA polymerase subunit E' TVN0487 471445 - 470348 - | molecular chaperone (DnaJ-related) dnaK 473313 - 471466 - | molecular chaperone DnaK TVN0489 473843 - 473313 - | molecular chaperone GrpE (heat shock protein) TERM 228 474614 - 474629 + G 73 -5.4 -4.66833 | TTTCTTCTTCCTCTT TACGCT TGTC GGCGTA TTTTTAGGCTTCACG TVN0490 473958 - 475190 + | multidrug efflux permease TVN0491 475215 - 475661 + | phospholipid-binding protein TVN0492 475673 - 476992 + | membrane-bound serine protease TVN0493 477074 - 477415 + | hypothetical protein TERM 229 477749 - 477737 - g 82 -3.3 -5.49809 | overlap 477738 GAAATTGTAAAAAAA GCTGC CCT GCAGA GGAGGCACGTGATTC TERM 230 477911 - 477894 - g 76 -6.9 -4.43012 | AGCCGAAGATTAAAA CCGTCCC AGCA GGGAAGG GTAAGGAGATAGTTA TVN0494 477602 - 479569 + | ATP-dependent protease Lon cobS 480700 - 479924 - | cobalamin synthase TERM 231 480288 - 480272 - G 71 -9.5 -2.9627 | overlap 480274 CGAACCGATCAGAGA GATCATC ATT GATGATC CAGAAACTACTTGTC TVN0496 481742 - 480705 - | aspartate aminotransferase TERM 232 482732 - 482720 - R 76 -7.7 -4.07568 | opp_overlap 482711 GGGTGTGCTTGAAAA GCTTG CCT CAAGC GGATTGATAGTTTCA TVN0497 483672 - 483190 - | hypothetical protein TVN0498 483803 - 485350 + | RNA polymerase II complex ELP3 subunit TVN0499 485525 - 487282 + | potassium-transporting ATPase subunit A TVN0500 487279 - 489285 + | potassium-transporting ATPase subunit B TVN0501 489279 - 489908 + | potassium-transporting ATPase subunit C TVN0502 490739 - 489921 - | nucleotide-binding protein (UspA-related) TVN0503 491021 - 491515 + | hypothetical protein TVN0504 492490 - 491501 - | kinase related to galactokinase and mevalonate kinase TVN0505 492576 - 493451 + | nucleoside-diphosphate sugar epimerase TVN0506 494392 - 493454 - | tRNA-modifying enzyme TERM 233 494208 - 494193 - G 100 -9 -4.73388 | opp_overlap 494192 AAGCGCCAGCAAAAA GCACAG TTTT CTGTGC ATGCGTTTAAGGCTG TVN0507 496100 - 494466 - | chaperonin GroEL thiE 496809 - 496174 - | thiamine-phosphate pyrophosphorylase TVN0509 497861 - 496806 - | hydrogenase maturation factor TERM 234 499413 - 499382 - g 76 -9.5 -3.4439 | overlap 499384 TATATGAATCTATAA TACCGCCTGTGTT TCCGAT AACACAGGCAGTT GAGGCGATCGTCGTT TERM 235 499411 - 499384 - g 89 -12.1 -3.28814 | overlap 499382 TATGAATCTATAATA CCGCCTGTGTT TCCGAT AACACAGGCAG TTGAGGCGATCGTCG TVN0510 497989 - 499542 + | amino acid transporter TVN0511 499547 - 500467 + | ABC-type peptide transport system, ATPase component TVN0512 500469 - 501242 + | ABC-type peptide transporter, ATPase component TVN0513 502172 - 501372 - | phosphomethylpyrimidine kinase TVN0514 502922 - 502242 - | transcription regulator TVN0515 504283 - 503027 - | metal-dependent hydrolase TVN0516 504400 - 504867 + | transcription regulator TVN0517 504854 - 506299 + | multidrug efflux permease TERM 236 506689 - 506712 + G 71 -4.6 -4.61633 | gap 1 AAGCATTGTACGTTT CCGGATTG-TA CTC TAGCATTCCGG TTTTTGAGAATGTAT TVN0518 506316 - 507890 + | hypothetical protein TERM 237 507901 - 507881 - f 87 -9.8 -4.02051 | opp_overlap 507881 CAGGAAGGGAAATAA GGGTAGAT AAAGG ATCTACCC TTCTGACGCATACTT TERM 238 507881 - 507901 + F 79 -9.8 -3.30619 | opp_overlap 507881 CAGGAAGGGAAATAA GGGTAGAT AAAGG ATCTACCC TTCTGACGCATACTT TVN0519 509497 - 510159 + | transcription regulator of a riboflavin/FAD biosynthetic operon TVN0520 510406 - 510164 - | hypothetical protein TVN0521 512704 - 510425 - | phosphoribosylformylglycinamidine synthase II TERM 239 511053 - 511030 - G 78 -8.8 -3.80855 | opp_overlap 511027 CGTTGTAAAAACTAA CGTTGCCAGC CACT ACAGGCAACG AGAATTTTCGGCAAA TERM 240 512626 - 512646 + g 93 -13.3 -2.80966 | overlap 512622 512630 TCTCATCGAGTGATA GCGAGAGGC CGT GCCTCTTGC TCATGTTGATTAAGT TERM 241 512630 - 512642 + g 71 -9.1 -3.29038 | overlap 512626 512622 ATCGAGTGATAGCGA GAGGC CGT GCCTC TTGCTCATGTTGATT TVN0522 513897 - 512809 - | glycosyltransferase TVN0523 515018 - 513972 - | hypothetical protein TERM 242 515477 - 515495 + G 73 -7.4 -4.07885 | overlap 515474 GCTTCCCGCCCTCGT GGCAACGA CGT TCCTTGCC TTTTCAAAAAGCGTC TERM 243 515876 - 515860 - g 75 -7.3 -4.27117 | overlap 515861 TCCTTAGAAGAGAAA CGCTGAA ATT TTCAGCA CGTGTGATAACTACC TVN0524 515205 - 516404 + | multidrug efflux permease TVN0525 517110 - 516499 - | MarC family integral membrane protein TERM 244 517128 - 517138 + r 70 -4 -4.90002 | CGGTGTATCTAAATC CTAT AAA ATAG TTTTCTTATCTATTC TVN0526 517873 - 517148 - | ABC-type multidrug transport system, permease component TERM 245 517582 - 517572 - G 71 -4 -4.75934 | GAAAAAACAAAATAA CTTA ACG TAAG CCCGAACATGTAGTC TVN0527 518702 - 517863 - | ABC-type daunorubicin transport system, ATPase component TVN0528 518780 - 519952 + | nucleoside-diphosphate-sugar epimerase TVN0529 520689 - 519949 - | dTDP-glucose pyrophosphorylase pgk 520765 - 521991 + | phosphoglycerate kinase TVN0531 521996 - 522388 + | prefoldin subunit alpha TVN0532 522395 - 523258 + | Signal recognition particle GTPase TVN0533 523302 - 523625 + | nucleic acid binding protein TVN0534 523625 - 524887 + | replication factor C large subunit TVN0535 524958 - 525551 + | 50S ribosomal protein L15e TERM 246 525954 - 525975 + G 72 -8.1 -3.81259 | gap 1 GGCAGCGAGGATAGG CATCC-CAAG GCT CTTGAGGATG TTTCGTAAATTCTGT TVN0536 525832 - 526731 + | polysaccharide deacetylase TVN0537 526852 - 527241 + | translation initiation factor IF-5A TVN0538 527199 - 528110 + | agmatinase rpl10e 528678 - 528148 - | 50S ribosomal protein L10e TVN0540 529095 - 528853 - | hypothetical protein gyrB 529230 - 531155 + | DNA gyrase subunit B TERM 247 531219 - 531202 - g 82 -4.9 -5.37043 | gap 1, overlap 531203 531204 AGTTGAGATAAAAAA GTCGTACT TAG AGTACG-C AATGAGTGTTATCGT TVN0542 531167 - 533545 + | DNA gyrase subunit A TVN0543 533595 - 534221 + | nicotinamidase-like amidase TVN0544 534246 - 535415 + | ABC-type molybdate transport system, solute-binding component TVN0545 535417 - 536211 + | ABC-type molybdate transport system, permease component TVN0546 536198 - 537100 + | ABC-type molybdate transporter, ATPase component TERM 248 537493 - 537477 - T 73 -8.7 -3.23183 | overlap 537470 TTATATAACAGGTAA CCTGCAG CCC CTGCAGA CATGTGCATAAAATC TVN0547 538204 - 537452 - | cell wall biosynthesis glycosyltransferase TVN0548 538409 - 538221 - | hypothetical protein TVN0549 539431 - 538469 - | hypothetical protein TERM 249 538560 - 538571 + g 71 -4.4 -4.82901 | opp_overlap 538560 TAGGTTTCGAAGAAG TGGA CTAT TCCA TTTTTCTCCAAAAAA TERM 250 539338 - 539358 + g 73 -5.5 -4.59511 | overlap 539321 539355 GATCGTTTCTACTAT GATCGATTA TTA TAATGGATC TTTTTGAGGGATCTT TVN0550 539813 - 539478 - | nucleic acid binding protein TVN0551 539914 - 540138 + | phosphoribosylformylglycinamidine synthase TERM 251 540300 - 540290 - g 75 -3.2 -5.1615 | TGAACACTCAAAAAA GCTC AAG AAGC ATAGACGATCTTTCC TERM 252 540889 - 540863 - g 73 -5.3 -4.72986 | CATCGCCATCAAAAA TTCTTGAATTT TTCTT AAATTCAGGAA AAAGATTGGAATCAA TVN0552 540271 - 541998 + | hypothetical protein TVN0553 542231 - 542920 + | hypothetical protein TVN0554 543273 - 542914 - | hypothetical protein TERM 253 543337 - 543314 - H 75 -9.8 -2.64126 | opp_overlap 543302 543318 543320, overlap 543302 543313 543316 AAGGATATCGATAAT TAGATATCAA TTTA TTGATATCTA TGAATAACTATAATA TVN0555 543386 - 543769 + | 30S ribosomal protein S8e TVN0556 543776 - 544030 + | Signal recognition particle 19 kDa protein TVN0557 545005 - 544022 - | DNA primase large subunit TERM 254 544535 - 544521 - G 85 -7.2 -4.89521 | opp_overlap 544521 ATATTCGAAACAAAA GATTCT CTT AGAATC TTAATTGCCACATCT TERM 255 544722 - 544733 + g 74 -4.4 -5.02476 | AAATTTTCAATATCT TCAG GCTG CTGA TTTTTTAAAGCATCT TVN0558 546084 - 545002 - | putative proline dipeptidase TERM 256 545413 - 545385 - G 70 -5.4 -4.57073 | opp_overlap 545379 TAGCTTTTCCAAAAA CCACTGTTCT TGTTATGTC AGAACAGTAG CCTTCATATTTTGCA TERM 257 546237 - 546264 + H 89 -10.8 -3.65425 | gap 1, opp_overlap 546246 TATCCTTACGTTCGT TAGCAGAGACTAC ATC GTAGT-TCTGCTA TTTCAGCTGTCTAAA radB 546468 - 547169 + | DNA repair and recombination protein RadB TVN0560 547159 - 548166 + | flap endonuclease-1 TERM 258 548500 - 548512 + G 76 -7.7 -4.09818 | ATACCGCGGTTTGAT GATGC TAG GCATC TTTATACTTGGTGTT TVN0561 548252 - 549499 + | major facilitator superfamily permease rps13p 549581 - 550096 + | 30S ribosomal protein S13P rps4p 550107 - 550709 + | 30S ribosomal protein S4 rps11p 550687 - 551085 + | 30S ribosomal protein S11P TVN0565 551086 - 551901 + | DNA-directed RNA polymerase subunit D TERM 259 551996 - 551976 - f 77 -9.7 -3.02511 | TGTAGCCTGGCAACA CGCGAGCTT GCC AAGCTCGTG CCTCGGGTTCAAATC TVN0566 552135 - 553325 + | molybdopterin biosynthesis protein TERM 260 554805 - 554817 + G 76 -7.7 -4.09511 | opp_overlap 554805 GCTTTGTATCGAAAA CTGGA GTA TCCAG TTTTCAGGAGATATT TERM 261 554817 - 554805 - g 76 -7.7 -4.18018 | opp_overlap 554805 GCTTTGTATCGAAAA CTGGA GTA TCCAG TTTTCAGGAGATATT TVN0567 553331 - 555211 + | molybdopterin biosynthesis protein TVN0568 556167 - 555376 - | hypothetical protein TVN0569 556254 - 556526 + | molybdopterin converting factor, small subunit TERM 262 557092 - 557082 - g 71 -3.2 -5.0065 | CACTTACAAATAAAA TCGC CTC GCAA GTAAGCCTTATGAGA TVN0570 556601 - 557275 + | transcription initiation factor IIB TVN0571 558521 - 557379 - | aminotransferase TERM 263 557940 - 557968 + g 72 -8.1 -3.81447 | overlap 557938 TAGCGCAGCCCCAGG CGGTGAGGCAAGG CCT TTTTGGCTCGCCG TTATTATCGCATCTA TVN0572 559821 - 558589 - | hypothetical protein TVN0573 561151 - 559784 - | DNA helicase TERM 264 561630 - 561649 + G 100 -9.4 -4.84359 | opp_overlap 561629 GCTTATAGATGTAAG TCTGAGTT TGTA AACTCAGA TTTTTATAAAAATAG TERM 265 562147 - 562161 + G 78 -10 -3.43774 | opp_overlap 562142, overlap 562142 AAATAATTCATTCTT GCGATG GAA CATCGC TTGCATTTTCTCTCA TVN0574 561228 - 562373 + | SAM-dependent methyltransferase ribA 562457 - 563044 + | GTP cyclohydrolase II TVN0576 563636 - 563052 - | indolepyruvate oxidoreductase subunit B TVN0577 565438 - 563624 - | indolepyruvate:ferredoxin oxidoreductase, alpha and beta subunits TERM 266 565746 - 565731 - g 95 -7.6 -4.95155 | overlap 565745 CGGAGACGATAAAAA GCTTGT GGCT ACAAGC AAGGAAGAGCTCGCT TVN0578 565645 - 566451 + | FKBP-type peptidyl-prolyl cis-trans isomerase TVN0579 566438 - 567190 + | rRNA methylase TVN0580 567165 - 567488 + | hypothetical protein TERM 267 567756 - 567773 + F 77 -8.5 -3.6106 | opp_overlap 567755 567756 CAAATCTCAAGAAAT TTTTGGC ATTG GCCAAAA TTTAGAAATCTTGGG TERM 268 567773 - 567756 - f 71 -8.5 -3.1314 | opp_overlap 567756, overlap 567755 CAAATCTCAAGAAAT TTTTGGC ATTG GCCAAAA TTTAGAAATCTTGGG TVN0581 568043 - 569632 + | Fe-S oxidoreductase TVN0582 569675 - 570508 + | hypothetical protein TVN0583 570518 - 571216 + | hypothetical protein TVN0584 572399 - 571194 - | Serine/threonine protein kinase TVN0585 573237 - 572464 - | competence damage-inducible protein A pyrH 573929 - 573246 - | uridylate kinase TERM 269 574101 - 574090 - H 74 -3 -5.24129 | TCCCTTTATAAAAAA CATA CTTA TATG CAACTATTATGCGTT TERM 270 575170 - 575145 - H 72 -9.1 -2.54459 | overlap 575144 AAGATGATCAGGAAG GTGGTTCCA CAACTTCT TGGAACCAC TTGAAAACCTGTGGA TERM 271 575213 - 575170 - g 83 -12.1 -2.71263 | gap 1, opp_overlap 575178, overlap 575144 575178 AACTTCTTGGAACCA CTTGAAAACCTGTGGAAT GTGCCATTG ATTCCACAGG-TTTCAAG ATCACAATCCGAGGT TERM 272 575206 - 575178 - g 83 -9 -4.17023 | opp_overlap 575178, overlap 575170 GGAACCACTTGAAAA CCTGTGGAAT GTGCCATTG ATTCCACAGG TTTCAAGATCACAAT TERM 273 575178 - 575206 + G 73 -9 -3.57263 | opp_overlap 575178 575170 GGAACCACTTGAAAA CCTGTGGAAT GTGCCATTG ATTCCACAGG TTTCAAGATCACAAT TVN0587 575161 - 575781 + | transposase TERM 274 576129 - 576146 + F 76 -4.1 -5.07652 | opp_overlap 576129 576139, overlap 576133 ATACAAACTGACGAA GTCGCAA AATT TTGCAAC TTTTGTTTTGCAAAC TVN0588 576190 - 577437 + | peptide chain release factor 1 TVN0589 577443 - 578372 + | cysteine synthase TVN0591 580265 - 579516 - | ICC-like phosphoesterase hemA 578390 - 579613 + | glutamyl-tRNA reductase TERM 275 579998 - 580017 + gT 73 -3.5 -5.02074 | opp_overlap 579998, overlap 580000 580013 TGAAATATATAATAT CGTCCCA TTCACT TGGGAGG TTTTTTGAGAACTCC TVN0592 581550 - 580405 - | hypothetical protein TVN0593 582449 - 581547 - | Fe-S oxidoreductase TERM 276 582553 - 582527 - R 72 -9.4 -2.54639 | opp_overlap 582526 582525 582543, overlap 582526 582525 582529 582543 ATTTTTAAATAAATT CAGGATGGACTT GAA ACGTCCAACCTG GCGTTTTTGCTTTCC TERM 277 582543 - 582556 + r 71 -3.1 -5.05577 | gap 1, opp_overlap 582529 582527 582526 582525 582543, overlap 582526 582525 AGGATGGACTTGAAA CGTCCA ACC TGG-CG TTTTTGCTTTCCTTT TVN0594 583737 - 582526 - | major facilitator superfamily permease TERM 278 583857 - 583847 - R 72 -2.6 -5.36441 | TTGTCATATAAAAAA TATT ATG AATA CATTTCTGGAAAAAT TVN0595 585218 - 584082 - | Fe-S oxidoreductase TVN0596 586599 - 585220 - | FAD/FMN-containing dehydrogenase TERM 279 588337 - 588326 - g 82 -2.2 -5.71712 | CGGCACAGAAAAAAA CGAA ACTT TCCG TTTTTATTTAAATGT TVN0597 586833 - 590237 + | hypothetical protein TVN0598 590215 - 590688 + | phosphatase TVN0599 591982 - 590669 - | DNA-binding protein TVN0600 592764 - 591988 - | undecaprenyl pyrophosphate synthase TERM 280 592206 - 592222 + g 78 -5.1 -4.91852 | TCCTAAACTTGCTCT CGTCGAT CTC ATCTACG TTTATTTTTCCTGCG TERM 281 592584 - 592567 - G 80 -11.3 -2.69647 | opp_overlap 592567, overlap 592564 AAGCTCCATACACCA GTCGAGG ACTT CCTCGAC TTTGTTTTTGCCCTT TERM 282 592567 - 592584 + g 100 -11.3 -4.88293 | opp_overlap 592567 592564 AAGCTCCATACACCA GTCGAGG ACTT CCTCGAC TTTGTTTTTGCCCTT TVN0601 593312 - 592854 - | hypothetical protein TVN0602 593418 - 593813 + | hypothetical protein TVN0603 593814 - 594797 + | transcription regulator (HTH) TVN0604 594890 - 595213 + | transcription regulator pheT 595236 - 596849 + | phenylalanyl-tRNA synthetase subunit beta TVN0606 597352 - 596843 - | acetyltransferase TERM 283 598146 - 598135 - g 74 -4.4 -4.92385 | overlap 598136 TAGACTCAAACAAAA GTGT GCCA ACAC ATGGCGTAATAGAAT TVN0607 597888 - 598631 + | flagellin TERM 284 598613 - 598654 + F 100 -12.6 -4.75372 | opp_overlap 598622, overlap 598615 GTCCTTCGTCTCCGA TGTGATACAGCTTCAATA AGTATA TATTGAAGCTGTACCATA TTTTTAGTGACTACT TERM 285 598615 - 598652 + F 100 -13 -3.99327 | opp_overlap 598622, overlap 598613 CCTTCGTCTCCGATG TGATACAGCTTCAATA AGTATA TATTGAAGCTGTACCA TATTTTTAGTGACTA TERM 286 598725 - 598709 - g 74 -4.3 -5.03747 | AAACTGGTTAAAAAA GAGGCCA CAG CGACCCC CCAGCAAAGCATTAG TVN0608 598670 - 599134 + | flagellar protein C TVN0609 599131 - 599784 + | flagellar protein E TVN0610 599774 - 600187 + | flagellar protein F TVN0611 600188 - 600631 + | flagellar protein G TVN0612 600636 - 601307 + | flagellar accessory protein FlaH TVN0613 601313 - 602920 + | ATPase TERM 287 604120 - 604102 - g 73 -8.2 -3.60502 | overlap 604103 604119 AGATATACTCTGAAA CCTATGCT GAG AGCATAGA CCTTGGGGCCGATGC TERM 288 604119 - 604103 - g 70 -9.5 -2.75819 | overlap 604102 GATATACTCTGAAAC CTATGCT GAG AGCATAG ACCTTGGGGCCGATG TVN0614 602910 - 604568 + | flagellar assembly protein J TERM 289 604943 - 604956 + F 73 -3.9 -5.16572 | TTCGAATTATGACGC TAAGA CATA TCTTA TTTTTTAAGTTAACT TERM 290 605219 - 605207 - f 91 -2.7 -6.11392 | AAATAAACAAAAAAA TTGAC AAC ATCAA ATATAAGAAAAACTA TERM 291 608375 - 608359 - g 90 -7.3 -5.08483 | GAAAAGGAAAGAAAA GGATAAC AAC GTCATCC CGTATGTAGTAAAGT TVN0615 605411 - 609019 + | TPR repeat-containing protein TVN0616 609064 - 609642 + | Zn-dependent protease TVN0617 610743 - 609673 - | glycosyltransferase TERM 292 609945 - 609934 - G 71 -3 -4.96657 | ATAAAGAGAATAAAA TATG ATGC CATA AGTGAATACACGCGG ef1B 611015 - 610740 - | elongation factor 1-beta TVN0619 611179 - 611012 - | RNA-binding protein involved in translation TVN0620 611334 - 612677 + | phosphomannomutase TVN0621 613268 - 612669 - | phosphatidylglycerophosphate synthase TVN0622 613749 - 613288 - | nucleotide kinase (related to CMP and AMP kinase) TVN0623 615125 - 613788 - | purine-cytosine permease TERM 293 614103 - 614092 - G 82 -3 -5.44638 | AGAACAAAAAGAAAA GTTT CATA AAAC CCGTAGAACCTGGTA TVN0624 615221 - 615712 + | transcription regulator TVN0625 615821 - 617128 + | phosphoribosylamine--glycine ligase TVN0626 617441 - 617710 + | hypothetical protein TVN0627 617864 - 618226 + | ArsR family transcriptional regulator TVN0628 618303 - 620303 + | hypothetical protein TVN0629 620800 - 621501 + | SAM-dependent methyltransfera TVN0630 621603 - 623447 + | Mg-chelatase, I and D subunits pyrB 623523 - 624440 + | aspartate carbamoyltransferase catalytic subunit TERM 294 624514 - 624526 + G 72 -7.7 -3.76373 | opp_overlap 624514 ATACCTTCTGGCAAA GCACT TAG AGTGC TTTCGATATTAGGAA TERM 295 624715 - 624705 - g 84 -2.6 -5.59534 | overlap 624693 AAGCATAATAAAAAA TTAT GAG ATAA GCGAAAAATTTAAGG TVN0632 624442 - 624900 + | aspartate carbamoyltransferase regulatory subunit hemD 625731 - 625033 - | uroporphyrinogen-III synthase TERM 296 625368 - 625382 + g 82 -5.8 -4.95302 | CGTTTGCCTTCTTGC TTCTTA AAA TAAGAA TTTTCTTGTCTTTGC hemC 626624 - 625731 - | porphobilinogen deaminase TERM 297 625998 - 626008 + g 74 -4 -4.91459 | ATTTTCGTCGTTTAT TTCT TCC AGAA TTTTTCTAACTGTTC TERM 298 626460 - 626487 + g 71 -4.2 -4.81551 | gap 1, overlap 626461 ATCCTGGACAAATAC TCCTGTCT-TTCC GAT GGAATAGATGGGG TTTTTAGTATCAATA TERM 299 626587 - 626601 + g 71 -10 -2.59668 | opp_overlap 626572 626587, overlap 626573 626572 626586 626595 626597 TTTGCCTGTGCAACA GCCAAG TTG CTTGGC CTTGTGCCAATCTTA TERM 300 626601 - 626587 - G 73 -10 -3.01712 | opp_overlap 626573 626572 626587 626586 626595 626597, overlap 626572 TTTGCCTGTGCAACA GCCAAG TTG CTTGGC CTTGTGCCAATCTTA TVN0635 627886 - 626624 - | glutamate-1-semialdehyde aminotransferase TERM 301 627939 - 627918 - H 72 -9.5 -2.53249 | overlap 627915 627913 GTGTACAGAAGATAT TCGCAGGTT TTCC AACCTACGA GTATACCACCTCAAC dcd 628081 - 628554 + | deoxycytidine triphosphate deaminase TVN0637 628696 - 629193 + | Acyl-CoA hydrolase TVN0638 629529 - 630443 + | hypothetical protein TERM 302 630809 - 630799 - g 82 -4.6 -5.27779 | TGTAATAGTAAAAAA CGGC AGC GCCA AAGGTATAATTATAA TVN0639 630455 - 632449 + | ATPase TVN0640 632707 - 632516 - | hypothetical protein TVN0641 632920 - 633900 + | HSP70 class molecular chaperone involved in cell morphogenesis TVN0642 633909 - 634229 + | hypothetical protein TERM 303 635086 - 635070 - g 80 -8.7 -4.05033 | opp_overlap 635076, overlap 635073 TCTAGCTCAGATAAA CAAGGCC AGG AGCCTTG GTATAAGGCTGACTG TVN0643 634882 - 635229 + | hypothetical protein TVN0644 635240 - 636076 + | permease TERM 304 637872 - 637846 - g 76 -10.8 -2.62246 | overlap 637845 GTAACGGGAATGAAG CCCACCGTTCCA TCT TGGACCGGCGAG ATGCTCCCAAGAAGC TVN0645 636160 - 641301 + | helicase (Lhr-related) TVN0646 641348 - 641800 + | nucleotide-binding protein (UspA-related) rps17E 641871 - 642098 + | 30S ribosomal protein S17e TERM 305 642145 - 642134 - g 82 -3 -5.45726 | GAGAGTTTAAAAAAA TTCA TAGC TGAA CATAGTAAAATTTTA TVN0648 642101 - 642496 + | hypothetical protein TVN0649 642581 - 643747 + | acetyl-CoA acetyltransferase TERM 306 644376 - 644363 - g 76 -6.7 -4.48221 | TACGAACGTACAAAA GCTCA ACCT TGAGC CAAAGGAACCACTTA TVN0650 643821 - 645074 + | glycine oxidase (deaminating) TVN0651 645211 - 645996 + | hypothetical protein TVN0652 646284 - 645988 - | hypothetical protein TERM 307 647035 - 647045 + G 71 -8.2 -3.40899 | AGCTCCCTTGGTGAC CGGC AAC GCCG TTATACTGAAACCTT TERM 308 647740 - 647720 - g 77 -8.3 -3.92604 | AATAGCATAGAAGAA GCTGTAGAT GAT ATCAACAGC ATGGACTACGGGCTC TVN0653 646436 - 647983 + | NAD-dependent aldehyde dehydrogenase TVN0654 648029 - 649573 + | O-antigen and teichoic acid export protein TVN0655 650206 - 649580 - | translation initiation factor IF-2 subunit beta TVN0656 650357 - 650773 + | hypothetical protein TVN0657 650770 - 651504 + | cell division GTPase TVN0658 651995 - 651564 - | transcription regulator TERM 309 652726 - 652714 - g 80 -6.3 -4.87133 | ACTCTCCAAAGAAAA GAAAG AAC CTTTC TGGATAATAGATATC TVN0659 652127 - 653071 + | asparagine synthetase A TVN0660 653675 - 653073 - | DNA polymerase elongation subunit TERM 310 653230 - 653252 + g 72 -9.2 -3.10796 | ATCTTTGCCTCAAGT TCACTTTTCC CAA GGTAAAGTGA TATTGCATCCTCAAG TVN0661 655077 - 653656 - | multidrug efflux permease TVN0662 655520 - 655098 - | CBS domain-containing protein TERM 311 656150 - 656138 - g 87 -4.9 -5.57054 | AAGAACGGAAAAAAA CTATT CCA AATAG ACACTTATACTGGTA TVN0663 656015 - 656650 + | proteasome protease subunit beta TVN0664 656692 - 658611 + | metal-dependent RNase TERM 312 658743 - 658754 + G 81 -4.4 -5.39721 | TAAAAACATTGGTAA TTGC CGTC GCAA TTTTTTCTGTAATCG TVN0665 658721 - 660406 + | hypothetical protein TVN0666 661101 - 660430 - | putative translaldolase TVN0667 662035 - 661085 - | transketolase TERM 313 661188 - 661169 - G 70 -9.4 -2.84801 | overlap 661166 CATGTGGAAATAGGA GAAAAGCT CCAT AGCTTTTC CGGATTTTCCAAAAG TVN0668 662853 - 662032 - | transketolase TVN0669 663914 - 663048 - | dihydrodipicolinate synthase TERM 314 664088 - 664074 - R 79 -4.4 -5.24129 | opp_overlap 664074 TTTTTCTATAAAAAA TTTAAA CTA TTTAAA TACTTTTTCTTCTTC TVN0670 665333 - 664080 - | Acyl-CoA dehydrogenase TVN0671 666900 - 665344 - | Acyl-CoA synthetase (AMP-forming) TVN0672 668251 - 667678 - | hypothetical protein TVN0673 668635 - 668267 - | hypothetical protein TERM 315 670421 - 670411 - g 74 -4 -5.04385 | GAGATTGTTAAAAAA TTGT TTG ACAA ATTCACAAATAGGAA TVN0674 669823 - 671343 + | MutS-like ATPase involved in mismatch repair TVN0675 671340 - 672842 + | MutS-like ATPase involved in mismatch repair TVN0676 673748 - 674383 + | formylmethanofuran dehydrogenase subunit E TVN0677 674771 - 675523 + | permease TERM 316 675991 - 675979 - f 71 -3.4 -5.18726 | overlap 675980 CTTTGACAACAAAAA TTCC TTCTG GGAA TAGGTCCTGAAGGAG TVN0678 676728 - 678044 + | integrase/recombinase TERM 317 678037 - 678057 + T 70 -8.3 -3.15768 | overlap 678029 CAATTGTGAGGCTGC CCTCTTGAT TTA GTCAAGGGG TATTCCAATTTTAAT TVN0679 678982 - 678392 - | hypothetical protein TERM 318 679164 - 679152 - H 70 -4.1 -4.82901 | TCTGTGTTAGAAAAA CGAAA TTT TCTCG GCAAAAATATAGGGG TERM 319 679516 - 679539 + H 85 -11.8 -3.07522 | CACACCTCCGTGTAT GTCAGGTCAA TTGG TTGACCTGGC TCTGTTAGAACGTAT TERM 320 680243 - 680213 - H 72 -9.1 -2.5409 | opp_overlap 680210 680221, overlap 680217 680221 ATAATGCTGAATTTA TGAATATATGCCG TGGGC CGGCATTTACTCA TAGGTTTAATGCCTG TERM 321 680221 - 680235 + H 70 -7.1 -3.80862 | opp_overlap 680217 680213 680221, overlap 680210 GAATTTATGAATATA TGCCG TGGGC CGGCA TTTACTCATAGGTTT TVN0680 680695 - 680940 + | integrase/recombinase TERM 322 683184 - 683167 - g 76 -7.7 -4.1822 | TCCTATGGTAAGAAA CTCCAGG ATTT CCTGAAG AGCAGGCTAATCGCC TVN0681 681337 - 684360 + | Type II restriction enzyme, methylase subunit TERM 323 686377 - 686408 + G 80 -10.2 -3.53012 | CAGGGTAATGCTGGC CACCGGATCCGTCT GTAG AGATAGATTCGGTG TTTCAAAAAGAGACA TERM 324 686768 - 686742 - g 70 -8 -3.73302 | opp_overlap 686742 686741 GAATAGATTCAACAA CTCTTGGAGAAG AGG CCTCTCCGAAAG ATTTTGGAATACAGG TVN0682 684344 - 687475 + | helicase TVN0683 688074 - 687568 - | hypothetical protein TERM 325 687964 - 687990 + g 71 -9.6 -2.96933 | opp_overlap 687963, overlap 687963 TTCACCAAAATCCAG TTTGTAAGGATT TTT AAACCTTACAAA ATTTCGTATTGCTAT TERM 326 688127 - 688115 - H 76 -6.3 -4.52897 | AGAATGAAGAAGAAA TCTCT CTC AGAGA AAAAAAATAACTAAG TERM 327 688429 - 688416 - H 76 -3.8 -5.29716 | opp_overlap 688416 GGAAGAGAATAAAAA GCTG AAGGAG CAGC TTGATGAATATAAGA TVN0684 689289 - 689729 + | hypothetical protein TVN0685 689781 - 691226 + | Beta-galactosidase TVN0686 691296 - 691625 + | hypothetical protein TVN0687 691828 - 692109 + | hypothetical protein TVN0688 692339 - 692554 + | hypothetical protein TVN0689 693675 - 694007 + | hypothetical protein TERM 328 694820 - 694810 - g 71 -3.2 -4.9792 | overlap 694811 CAGGGGACAGAAAAA TCAC AGG GCGA ATTTATATATTCCAC TVN0690 694060 - 696003 + | hypothetical protein TERM 329 696554 - 696540 - f 91 -5 -5.8901 | opp_overlap 696540 AGAGAAAAGAAAAAA TGGAAT AAA ACTCCA TATTTCAGCTTTAAC TVN0691 696958 - 697170 + | transposase TVN0692 697684 - 698004 + | hypothetical protein TVN0693 698340 - 698591 + | hypothetical protein TERM 330 699041 - 699028 - g 75 -3.1 -5.10208 | CAAGGCCAAGAAAAA GACAC AATA ATGTC AGTGATCAAAGGAAT TVN0694 698845 - 699210 + | hypothetical protein TVN0695 699600 - 700142 + | site-specific recombinase, DNA invertase Pin-related TVN0696 700497 - 700679 + | AAA ATPase family protein TERM 331 701727 - 701696 - T 70 -8 -3.33003 | overlap 701689 701698 701714 TAACAGAAGGATGAA CACATCCAGGCAAG AAAA CTTATCTGGATGAG GCACACCCTAGAAAA TERM 332 701725 - 701698 - T 77 -9.2 -3.22086 | overlap 701689 701696 701714 ACAGAAGGATGAACA CATCCAGGCAAG AAAA CTTATCTGGATG AGGCACACCCTAGAA TVN0697 702900 - 702334 - | hypothetical protein TVN0698 703840 - 703424 - | hypothetical protein TERM 333 703690 - 703700 + g 82 -6.8 -4.74706 | GAATCATTATTAGCT CGAG GCC CTCG TTTTTCGCTGTTCCG TVN0699 704973 - 703837 - | hypothetical protein TERM 334 704137 - 704168 + g 80 -2.9 -5.49234 | gap 1, overlap 704139 TTTTGAGTAGCGGTT CAGTAGCGGTTCGC CAGAA GTGC-CCGCTACCG TTTTTTGTTCGCTGT TERM 335 704326 - 704338 + g 95 -7.7 -4.91511 | TGACTGGTTTTCCTG CGGTA TCG TACCG TTTTTCTGATCCGCT TVN0700 705711 - 705358 - | hypothetical protein TVN0701 706346 - 705804 - | hypothetical protein TVN0702 707052 - 708014 + | hypothetical protein TVN0703 708911 - 708255 - | Serine/threonine protein phosphatase TVN0704 709548 - 708898 - | sugar fermentation stimulation protein A TVN0705 709660 - 710526 + | small-conductance mechanosensitive channel protein TVN0706 710924 - 710523 - | thioesterase TVN0707 711241 - 710951 - | coiled-coil protein TVN0708 712958 - 711315 - | amino acid transporter TVN0709 714843 - 714418 - | hypothetical protein TVN0710 715045 - 719175 + | hypothetical protein TERM 336 720009 - 720030 + G 76 -10.2 -2.96274 | AATATTCCGATCGAT GGGGGAAT AACTAA ATTCCCCC TCTAATTCTAGCGGC TVN0711 719265 - 720035 + | 3-oxoacyl-[acyl-carrier-protein] reductase TVN0712 720480 - 720869 + | hypothetical protein TVN0713 720929 - 721141 + | hypothetical protein TVN0714 721251 - 721670 + | hypothetical protein TVN0715 721703 - 722263 + | threonine efflux protein TERM 337 722397 - 722420 + F 79 -8.2 -3.94276 | opp_overlap 722403, overlap 722398 ATACCAATCGGTTTT ATCAAACGTC TATT GACGTTTGAC TTTATGCCATATTTT TERM 338 722398 - 722419 + F 83 -11.7 -2.95481 | opp_overlap 722403, overlap 722397 TACCAATCGGTTTTA TCAAACGTC TATT GACGTTTGA CTTTATGCCATATTT TVN0716 722669 - 723097 + | nucleotide-binding protein (UspA-related) TVN0717 723982 - 723257 - | ribose-5-phosphate isomerase A TVN0718 725804 - 724374 - | amino acid transporter TVN0719 726669 - 726109 - | hypothetical protein TERM 339 727427 - 727445 + r 71 -3.1 -5.03994 | overlap 727434 GTTTTTCCGCTTTTC TGCGAGG GCAAG TCTTGCA TTTTTATATGTAAAG TVN0720 728988 - 727696 - | methyltransferase TERM 340 728961 - 728981 + g 75 -7.5 -4.26076 | TATTTACAGACGTGA GGTGTTCAC CTA GTGTACGCC TTTTCATAAGAATCG TVN0721 730400 - 731305 + | major facilitator superfamily permease TVN0722 733434 - 732760 - | restriction endonuclease TERM 341 732860 - 732874 + g 71 -5 -4.60487 | ACTTCCCTCTGCAGT TTTTCG CTT CGAGAA TTTTTAAGGATACTG TERM 342 733002 - 732983 - G 70 -7.9 -3.58522 | AAGGTATTATAAAGA TTTCCGG CATCTT CCGGAAA AAGAAATACATCCTT TERM 343 734203 - 734229 + H 83 -8.2 -4.39748 | opp_overlap 734200 734203, overlap 734200 ATAAAAATTATATTA TGCAACAAAA GGTGTAG TTTTGTTGCA TTGTTTTATATACTA TVN0723 734352 - 734942 + | integrase/recombinase TERM 344 737423 - 737442 + T 85 -6.6 -5.22312 | TATTCTCTATCCTTA TAAAATAG TCTT CTATTTTA TTTTTTAATGTCGCT TVN0724 738181 - 737684 - | hypothetical protein TERM 345 738360 - 738385 + r 74 -2.1 -5.41359 | gap 1, opp_overlap 738377 738381, overlap 738370 738381 738381 TTTTCTTTATGCCTC TTTGATTTACTA AAT TAG-AAATTAAA TTTTTTAATTTAATT TERM 346 738402 - 738377 - R 74 -9.3 -2.97667 | opp_overlap 738360 738370 738381 738381 738399, overlap 738381 738399 TGATTTACTAAATTA GAAATTAAATT TTTT AATTTAATTTC ATCAACATGAAAGTT TVN0725 740145 - 739837 - | Type II restriction enzyme, methylase subunit TERM 347 740503 - 740491 - H 79 -5.5 -5.10516 | AAAAAGGAAATAAAA CAGCC GAT GGCTA TATAAAAATATTGAA TVN0726 740668 - 741039 + | integrase/recombinase TVN0727 741296 - 742213 + | esterase TVN0728 743376 - 742429 - | transcription regulator TERM 348 743122 - 743143 + g 77 -3.6 -5.24796 | TAGCCCGAATATGTT GGGGGAAG CTATAA CTACTCCC TTTTTGTTGTCTACC TVN0729 744493 - 743399 - | chorismate synthase TERM 349 743667 - 743678 + g 70 -3.6 -4.78077 | ATGCCTCCAAGTATG CCGC CATT GTGG TTTGTTTTAGTTAGA TERM 350 744185 - 744197 + g 77 -4.8 -4.94962 | TGTGTAATCACTGTG TCCG GGCCG CGGA TTTTCTTTCAGTTCT TVN0730 745363 - 744794 - | phosphoglycerate mutase TERM 351 746052 - 746066 + G 70 -5.6 -4.27965 | GTTATTTTGCTGCCT GACCGG CGC CCTGTC TTTGCTTTTACTTAT TVN0731 745716 - 747659 + | thioredoxin domain-containing protein TERM 352 748674 - 748686 + G 70 -7.7 -3.57797 | opp_overlap 748674 748673 748671 TGGAAATTTAAACAC TCCTG TTC CAGGA TTATCTCAGTTTCCG TVN0732 747748 - 749124 + | cytochrome bd-type quinol oxidase, subunit 1 TVN0733 749130 - 750122 + | hypothetical protein TERM 353 750126 - 750138 + T 72 -4.9 -4.81357 | CTACCCAAGTGACTC GTATT TTT AATAC TTTATTTTCTGATAT TVN0734 751384 - 750626 - | geranylgeranylglyceryl phosphate synthase-like protein TVN0735 752193 - 751384 - | (S)-2,3-di-O-geranylgeranylglyceryl phosphate synthase TERM 354 751937 - 751911 - G 74 -8 -3.95786 | opp_overlap 751908 751911 ACAGAGAGAGAACAA TTGCAACTGCGA ACA TTGCAGATGCAA TAAATTTTGCGCTGG TERM 355 751911 - 751937 + g 75 -10.2 -2.75577 | opp_overlap 751911, overlap 751908 ACAGAGAGAGAACAA TTGCAACTGCGA ACA TTGCAGATGCAA TAAATTTTGCGCTGG TVN0736 753268 - 752240 - | N(2),N(2)-dimethylguanosine tRNA methyltransferase TVN0737 753810 - 753265 - | putative NTPase TVN0738 754169 - 753807 - | hypothetical protein TVN0739 756862 - 754205 - | DNA helicase II TERM 356 756685 - 756699 + g 75 -5.6 -4.68506 | overlap 756696 ATTCTAGTTCTACAC CTTCCC TTT GGGCAG TTTTTAGAATTGCTT TERM 357 758043 - 758022 - g 89 -7.3 -4.9138 | opp_overlap 758024, overlap 758024 ACGATGGAAACAAAA CCTCTTCTC GGGG GAGAAGATG TATCAAGATTTCTGC TVN0740 757029 - 758219 + | metal-dependent carboxypeptidase TVN0741 758931 - 758278 - | hypothetical protein TVN0742 759302 - 759000 - | DNA-directed RNA polymerase subunit M TVN0743 759485 - 759889 + | CoA-binding protein TVN0744 760633 - 760262 - | succinate dehydrogenase, hydrophobic anchor subunit TVN0745 761055 - 760633 - | succinate dehydrogenase, subunit C sdhB 761784 - 761062 - | succinate dehydrogenase iron-sulfur subunit TERM 358 761373 - 761401 + g 73 -8.9 -3.49924 | AATTTGCATATTCAT GGAATTGTTCAGG AGT CTGGGACAATTCC TTATCGTACTTTCCA sdhA 763497 - 761794 - | succinate dehydrogenase flavoprotein subunit TERM 359 762368 - 762385 + g 72 -6.3 -4.36914 | AATCTGTTCGCTCCG TGTATGC TAAC GCATGCA TTTTCTCCAGCAGCA TERM 360 763031 - 763051 + g 70 -5.6 -4.2828 | opp_overlap 763031 ATTGAGGTTGCAAAA TATTCATT ATAGA AATGAATA TTTTCGTACCTGAGG TERM 361 763161 - 763151 - G 74 -6.8 -4.26903 | CTCAGGGCACCAAAA TCCC TTT GGGA AATAGTACCGTCAGG TVN0748 763616 - 764458 + | DMT family permease moaC 764912 - 764460 - | putative molybdenum cofactor biosynthesis protein C TVN0750 765249 - 765016 - | hypothetical protein TVN0751 765628 - 766116 + | molybdopterin biosynthesis protein TERM 362 766439 - 766428 - T 74 -3 -5.31275 | GGCTAGGAGAAAAAA TTGT ACTT ACAA GTGAGGGTGAGTTTG TERM 363 766530 - 766516 - T 93 -5.7 -6.01187 | AATGAAACAAAAAAA GAACG TCAAT CGTTC TTCAGCCCCGCCCCA TVN0752 767543 - 766521 - | threonine synthase TVN0753 768061 - 767609 - | hypothetical protein TERM 364 768297 - 768309 + G 75 -5.5 -4.89567 | overlap 768289 GCTGAGATGCCATCG GCGTA TTA TGCGC TTTTATCTTTTAAGG TVN0754 768171 - 769271 + | hypothetical protein TERM 365 769353 - 769364 + G 73 -5.8 -4.41494 | TTATGTTTTCAGATG CCGT GATT ACGG TTTTGATTGCAGCTA TVN0755 769333 - 769512 + | metal-binding protein TVN0756 770235 - 769525 - | metal-dependent hydrolase TERM 366 770477 - 770511 + G 72 -9.4 -3.19026 | opp_overlap 770477 770479 ACGGTAAAGGATCAA CATCTGCCTTTATATA TAG TATATTGAGGCAGAAG TTCAGTGTTGGAGTA TERM 367 771323 - 771342 + G 76 -2.9 -5.36314 | TAGCAGGAATTCTCT CGGATAA AGACGC TTATTCG TTTTTTAGTGTTTTG TVN0757 770326 - 771612 + | folylpolyglutamate synthase TERM 368 772064 - 772042 - g 76 -9.9 -3.38218 | CGAAATACGTTACAA GGATGCTGC AGGAG GCAACATCC AATGTAGAAGTTATC TERM 369 772395 - 772376 - g 76 -8 -4.08064 | opp_overlap 772375 AACTCTCCTCGAAAA TCTTGATT CCAG AATCAAGA GTCGTCTGAACCAAG TERM 370 772801 - 772787 - g 74 -10 -3.17875 | overlap 772785 772784 AATATATGAAAATTA TCGCAG GAT CTGCGA AGATCTCGGCTTCAC cdc6 771819 - 773033 + | cell division control protein 6 TERM 371 773046 - 773064 + T 71 -7.4 -3.56972 | opp_overlap 773046 773045 TAAAAAGAATTAAAG GGGGCT TAATACC AGCCCC TTACTTTCATCGCAT TVN0759 774358 - 773051 - | glutamate dehydrogenase TERM 372 774544 - 774533 - R 71 -3 -5.13473 | AGGATACGGAAAAAA TTCT TATA AGAA ACCTTTAGGTTTTAA TVN0760 775819 - 774569 - | glutamate dehydrogenase leuS 778635 - 775903 - | leucyl-tRNA synthetase TERM 373 776951 - 776975 + gr 70 -5.8 -4.25016 | ATATCGACGGGATAC CAGTATGAAA ATTCG TTTCGTGCTG TTCTTTCTTCATCAT TVN0762 779141 - 778593 - | pyruvoyl-dependent arginine decarboxylase TERM 374 779218 - 779228 + H 77 -3.2 -5.5074 | TTTTACGCGTGTATT TTGC ATT GCAG TTTTTTATTACATTA TVN0763 779361 - 780822 + | amino acid transporter TVN0764 782078 - 780828 - | transposase TERM 375 781312 - 781325 + g 75 -5.3 -4.90381 | TTGACTTTCCTGTTT CTCTT CATG AAGAG TTTTCTTATCTTCAC TVN0765 782480 - 782068 - | site-specific integrase-resolvase TERM 376 782332 - 782344 + g 72 -6.3 -4.39828 | opp_overlap 782332, overlap 782325 782324 GTTTTTCTCTTAACA TCCTT GTT AAGGA TTTTATAAACGTCTT TERM 377 782601 - 782615 + H 85 -6.4 -5.2197 | TTTCATAGTGACTGC CCTAGT GTC ACTGGG TTTTTACTTTTTGTC TERM 378 782851 - 782865 + G 75 -7.1 -4.39568 | TGTTTGGACTTTCGG CAGCG TCTTT CGCTG TTTTCATATATGAAT TVN0766 782700 - 782903 + | hypothetical protein TVN0767 783822 - 782917 - | acetyltransferase TVN0768 783936 - 785282 + | malate oxidoreductase (malic enzyme) TVN0769 785263 - 785733 + | acetyltransferase TVN0770 786887 - 786138 - | hypothetical protein TERM 379 786291 - 786273 - G 73 -10.3 -2.52635 | opp_overlap 786267 786273, overlap 786272 ATCGGCATTATCAAC GTGTCCG CAACC CGGACAC TTGAATTCCTTTCCT TERM 380 786273 - 786291 + g 78 -10.3 -3.26998 | opp_overlap 786273 786272, overlap 786267 ATCGGCATTATCAAC GTGTCCG CAACC CGGACAC TTGAATTCCTTTCCT TVN0771 787296 - 787823 + | nicotinamidase-like amidase TERM 381 789118 - 789134 + GF 75 -8.7 -3.38207 | ATTCCGGACGTCATT GATCCGC TTG GTGGATC TTACTATGTTGAATG TVN0772 787900 - 789597 + | methylmalonyl-CoA mutase, alpha subunit TVN0773 789560 - 790006 + | methylmalonyl-CoA mutase, cobalamin-binding subunit TVN0774 790007 - 790954 + | GTPase TVN0775 790978 - 791352 + | molecular chaperone (small heat shock protein, hsp20-related) TVN0776 792887 - 791355 - | protein kinase TVN0777 793234 - 792902 - | thioredoxin TVN0778 793584 - 793261 - | hypothetical protein TVN0779 793726 - 794454 + | TPR repeat-containing protein TVN0780 794924 - 794445 - | hypothetical protein TERM 382 795253 - 795238 - g 76 -7.6 -4.15565 | TGGATCAGCTGAAAA GATGAG GAGG CTCATC CGTGACGGAATAACG TERM 383 795599 - 795585 - g 72 -7.2 -4.02108 | TCTATGACAATGAAA CTATGA TAC TCATAG ATGGTAACGGCATAT TVN0781 794990 - 795955 + | bifunctional methylated DNA-protein cysteine methyltransferase/deoxyinosine 3'endonuclease TVN0782 797031 - 795952 - | mevalonate pyrophosphate decarboxylase TERM 384 796643 - 796656 + g 71 -2.3 -5.19998 | GATTCGCCTAGTCCT TTCGC ACCA GCGTA TTTTCTTTTAATTCT TVN0783 798371 - 797109 - | glycerate kinase TERM 385 799043 - 799024 - g 71 -10 -2.6348 | overlap 799023 799036 TGTAAAGTCTATAAT GGACAGAG TAAA CTCTGCCC GCAAAGTAGCTATAG TVN0784 798467 - 799969 + | benzoylformate decarboxylase TVN0785 799969 - 800469 + | Rossmann fold nucleotide-binding protein TERM 386 800732 - 800722 - g 91 -8.2 -4.62336 | ATTTCATCGTAAAAA GCCC GCA GGGC CTTAGACATGTAGTC TVN0786 800502 - 800897 + | hypothetical protein TVN0787 802692 - 800944 - | amino acid transporter TERM 387 802670 - 802657 - G 73 -2.5 -5.19275 | AGTCAGAAAATAAAA TATAT ATGA ATATA AAAAAAATATCCCAG TVN0788 803188 - 802745 - | hypothetical protein TERM 388 802940 - 802930 - G 86 -3.2 -5.68438 | TGACGAAAGAAAAAA GGCT TGG AACC ATCATTATTACAGAA TVN0789 803300 - 804319 + | hypothetical protein TERM 389 805532 - 805516 - g 71 -4.5 -4.69214 | GATCTAAGAAAGAAA GATCTTT ATG AAAAATC CCATTATCAAGGGGC TVN0790 804316 - 805746 + | thiamine biosynthesis protein ThiI TVN0791 806385 - 805714 - | hypothetical protein TVN0792 807460 - 806423 - | cell division protein FtsZ TERM 390 806962 - 806981 + g 91 -12.2 -3.44146 | overlap 806965 TCTTGACTAATTTTC GAACGCCT TCGT AGGCGTTC TTCATTCTGACGAAA TERM 391 806965 - 806978 + g 72 -8.1 -3.8591 | overlap 806962 TGACTAATTTTCGAA CGCCT TCGT AGGCG TTCTTCATTCTGACG TVN0793 807623 - 808276 + | hypothetical protein TVN0794 808305 - 808580 + | molybdopterin converting factor, small subunit TVN0795 810415 - 808604 - | aldehyde:ferredoxin oxidoreductase TERM 392 810808 - 810834 + G 78 -10.2 -3.28712 | overlap 810809 CGCTGAGCGGTCACG TCGCAGCTGAAA CTG TTTTAGCTGCGC TTGTGAAGCGGGGAG TERM 393 810809 - 810833 + G 93 -13.7 -2.57132 | overlap 810808 GCTGAGCGGTCACGT CGCAGCTGAAA CTG TTTTAGCTGCG CTTGTGAAGCGGGGA TVN0796 810543 - 811706 + | glycine hydroxymethyltransferase TVN0797 811696 - 812781 + | CBS domain-containing protein TVN0798 812849 - 814159 + | Zn-dependent protease TVN0799 814156 - 815451 + | Zn-dependent protease TERM 394 815898 - 815912 + G 76 -10 -3.254 | overlap 815896 CCTGTATTGATCATC CTGCCT ACA AGGCAG TCTTCTCAATAACTC TVN0800 815552 - 817891 + | aminopeptidase N TVN0801 817924 - 819318 + | multidrug efflux permease TVN0802 819699 - 820736 + | carbamoyl phosphate synthase small subunit TERM 395 821719 - 821699 - g 72 -9.7 -2.78032 | opp_overlap 821687, overlap 821698 821696 TCGCGGCGAAAATAG CCGTTGGGT ACA ACCTAACGG AGATAAGGAACCCAA carB 820729 - 823863 + | carbamoyl phosphate synthase large subunit TERM 396 824362 - 824342 - g 83 -11.9 -2.61695 | overlap 824341 824339 GTCATCGTCAAAGAC TCCTGAGCA GAC TGCCCAGGA CCTGATGCAAATAAT TVN0804 823875 - 824522 + | endonuclease III TVN0805 826311 - 824539 - | amino acid transporter TERM 397 825891 - 825873 - G 80 -2.5 -5.42605 | gap 1, overlap 825876 TGAAGAAAAAGAAAA GTATCAGA AAAA TC-GATAC GATTATGCCGAGTGG TERM 398 826370 - 826352 - H 73 -9 -3.16055 | opp_overlap 826343 826342 826349 TAAATGTCGTAGTAA TATTACGA ATT TCGTAATA CAATTAATATATGCA TVN0806 826402 - 827631 + | diaminopimelate decarboxylase TVN0807 827724 - 831149 + | chromosome segregation ATPase TVN0808 831139 - 831891 + | hypothetical protein TVN0809 832486 - 831893 - | hypothetical protein TERM 399 832922 - 832959 + G 95 -11.4 -3.86372 | gap 1 ATTACTCTTCTTATT TCTGGGATATCTACCGG GCTTA CCGGT-GTTATCCCGGA TTATGTTTCCATTGG TVN0810 832637 - 833926 + | major facilitator superfamily permease TVN0811 835692 - 834091 - | N-methylhydaintoinase B TVN0812 837664 - 835694 - | N-methylhydaintoinase A TVN0813 839460 - 838588 - | phospholipase D TERM 400 841531 - 841519 - H 74 -6.3 -4.38203 | CACACAAGTAATAAA TAAGG CTT CCTTA CTAACAAGACCACCG TERM 401 843283 - 843244 - g 78 -10 -3.53811 | overlap 843247 TGGAGTTCCTTGAAA GTATTGGCCACATTGATG GAGA CATCGAAGCGGCCAAGAC AGCGCTAGTATTGAG TERM 402 843280 - 843247 - g 76 -10.3 -2.90615 | overlap 843244 AGTTCCTTGAAAGTA TTGGCCACATTGATG GAGA CATCGAAGCGGCCAA GACAGCGCTAGTATT TVN0814 841665 - 843689 + | ski2-like helicase TVN0815 843667 - 844590 + | methyltransferase TVN0816 844763 - 846070 + | NAD(FAD)-dependent dehydrogenase TERM 403 847266 - 847217 - g 78 -8.8 -3.75295 | gap 1, opp_overlap 847257, overlap 847223 CATAAAGGAGGGAAA GATAGAGCCAGTGCAAATAATGA GGAAT TCCTTATCTACACTGGC-CAATC AGATCTTGTCTGAAG TERM 404 847261 - 847223 - g 86 -11.9 -3.20029 | opp_overlap 847257, overlap 847217 GGAGGGAAAGATAGA GCCAGTGCAAATAATGA GGAAT TCCTTATCTACACTGGC CAATCAGATCTTGTC TERM 405 848076 - 848096 + G 75 -5.5 -4.82901 | overlap 848078 GCATCCGCTCCGAGG TCCAGATTT TTT AAATCTGTA TTTTTATACGAAGCC TERM 406 848078 - 848094 + G 74 -8.1 -4.03995 | overlap 848076 ATCCGCTCCGAGGTC CAGATTT TTT AAATCTG TATTTTTATACGAAG TVN0817 846072 - 848756 + | Lhr-like helicase TVN0818 850447 - 848765 - | membrane-associated Zn-dependent protease 1 TERM 407 849802 - 849781 - G 74 -4.5 -4.7629 | opp_overlap 849781 849793 849794 849796 TCACCAACTGAAAAA CTATTGG GCTTCCTA CCAATAG TATTGGTGATTTTAT TERM 408 850635 - 850655 + r 70 -6.9 -3.81575 | CAATTCGTAAATGTC TTGTCACGT TAA ACGTAACAA TTATAATTTTTTGGC alaS 853338 - 850702 - | alanyl-tRNA synthetase TERM 409 852457 - 852424 - G 78 -9.7 -3.52717 | gap 1, overlap 852420 AGTAGATAGAACGAA GGCCTC-GTCATAAGG TTC CCTCATGACAGAAACC CTGACAACATCAGAC TERM 410 852748 - 852762 + g 70 -2.8 -4.93968 | ATTTCCGGCATTTCC CCCT CCTGACC AGGG TTTTTCCTTATACGT TVN0820 853903 - 853481 - | GAF domain-containing protein TVN0821 854868 - 853975 - | small-conductance mechanosensitive channel protein TERM 411 855602 - 855579 - R 83 -10.4 -3.31558 | overlap 855585 AAAGTATTACAGGAA GTCAAACGTC AACG GACATTTGAC AAAGCCAAAAAATCG TVN0822 856916 - 855624 - | major facilitator superfamily permease TERM 412 858194 - 858179 - g 76 -7.6 -4.23758 | overlap 858184 AGCCGATAGGGAAAA CATAGG CGTG CCTATG AACGCACACAACTTA TVN0823 857055 - 859451 + | DNA polymerase II TVN0824 860619 - 859714 - | ornithine cyclodeaminase TERM 413 860828 - 860802 - g 79 -6.6 -4.64048 | GAGTATAGAAAGAAA CATCCTTACGTA ATG TACGAAATGATG AAACAGATACCTGAA TVN0825 860769 - 861800 + | glucosamine 6-phosphate synthase TVN0826 861874 - 862758 + | 3-hydroxyacyl-CoA dehydrogenase TVN0827 862775 - 863458 + | Uracil-DNA glycosylase TVN0828 864737 - 863466 - | Mn2+ transporter TERM 414 864273 - 864263 - G 77 -4.6 -4.93296 | TGACTATTATAAAAA GGAC GAG GCCC ACTGACACGATCATG TERM 415 865808 - 865822 + G 70 -5.6 -4.4078 | overlap 865806 TGGATCTGGCATAGT GCATGC TGC GCCTGC TTTTGGTTCCGACGA ileS 864852 - 867938 + | isoleucyl-tRNA synthetase TERM 416 868480 - 868459 - g 70 -3.7 -4.84359 | CGAGCGCGATAAAAA GTACGCA GTGATTTG TGCGCAC GGAAATAGAAGTGCA TVN0830 867995 - 868615 + | rhodanese-related protein TVN0831 868766 - 869119 + | hypothetical protein TERM 417 869248 - 869229 - g 71 -3 -4.96848 | gap 1 GGTGCCATAGAAAAA CTTTT-ATC TTC GATCAAAAG CATCGAAAACGAAGG TVN0832 869124 - 869690 + | phosphoglycerate mutase TVN0833 869966 - 870514 + | 2-oxoacid-ferredoxin oxidoreductase, gamma subunit TVN0834 870523 - 870807 + | 2-oxoisovalerate-ferredoxin oxidoreductase, subunit delta (vorD) TVN0835 870804 - 871982 + | pyruvate:ferredoxin oxidoreductase, alpha subunit TVN0836 871982 - 872869 + | 2-ketoisovalerate ferredoxin oxidoreductase subunit beta TVN0837 873440 - 872883 - | SAM-dependent methyltransferase TERM 418 872954 - 872975 + g 72 -7.3 -3.92185 | opp_overlap 872953, overlap 872956 CGATGTCAAAGTTAT GCGATGCTA TCTC TAGCATAGC TTCCTTTTTATCTAT TVN0838 873691 - 874800 + | coenzyme PQQ synthesis protein E TVN0839 875242 - 874790 - | hypothetical protein TVN0840 876487 - 875243 - | glycerol-3-phosphate dehydrogenase TERM 419 875845 - 875818 - G 70 -9.3 -2.75992 | gap 1, overlap 875815 875842 875843 GTTTACTGAACACTA CCA-TTATGCCG GCTGA CGGCATAACTGG AGACCCGCCATAACC TVN0841 877129 - 876539 - | glycerophosphoryl diester phosphodiesterase TVN0842 878391 - 877087 - | transposase TERM 420 877679 - 877700 + gr 70 -5.1 -4.52589 | ATCTCCCTACTCCTT CCCTGCTTA TGCC TAGCCAGGG TTTTCTGTGCGACAC TVN0843 878782 - 878378 - | hypothetical protein TERM 421 878843 - 878813 - R 79 -5.2 -5.07567 | opp_overlap 878817 878818 878831 878835, overlap 878817 CCAGAGTTTAAAAAA CTTATCCCGCCCCT AGA AGGGGCGAGGCTTG TCTCTCGTTTTTGTC TERM 422 878817 - 878840 + r 77 -8.8 -3.69297 | gap 1, opp_overlap 878817 878813, overlap 878818 878831 878835 AGTTTAAAAAACTTA TCC-CGCCCCT AGA AGGGGCGAGGC TTGTCTCTCGTTTTT TERM 423 878839 - 878817 - R 83 -11.2 -2.92513 | opp_overlap 878817 878818 878831 878835, overlap 878813 AGTTTAAAAAACTTA TCCCGCCCCT AGA AGGGGCGAGG CTTGTCTCTCGTTTT TERM 424 878818 - 878839 + r 86 -12.3 -2.79952 | gap 1, opp_overlap 878817 878813, overlap 878817 878831 878835 GTTTAAAAAACTTAT CC-CGCCCCT AGA AGGGGCGAGG CTTGTCTCTCGTTTT TVN0844 879025 - 878825 - | hypothetical protein TVN0845 879635 - 879099 - | nicotinamide-nucleotide adenylyltransferase TERM 425 879430 - 879449 + g 70 -9.2 -2.79915 | TAATTGTAAACGTGT TCCCGCTC AAGT GTGCGGGA TATCATAAGATGCCT TERM 426 880167 - 880148 - g 72 -9.4 -3.21099 | overlap 880146 880145 TATACGATAAAACCA CTGAAGAT TACG ATCTTCAG GCTGCAAGGATGATC TERM 427 880972 - 880959 - g 71 -9.5 -3.05384 | TCTCTTTGCATTGAA CGCCG GCCA CGGCG AGTATCCAAGGATTG TVN0846 879862 - 881751 + | 2-oxoacid--ferredoxin oxidoreductase, alpha subunit TVN0847 881741 - 882664 + | 2-oxoglutarate ferredoxin oxidoreductase subunit beta TVN0848 883839 - 882679 - | aspartate aminotransferase TERM 428 883107 - 883139 + g 71 -4.8 -4.66833 | overlap 883125 CACTGTTGGTATGGG CGTAGCCTATGCGC AGGCC GCTCATAGCGTACG TTTTTGACATTGAGA TVN0849 883980 - 884813 + | site-specific DNA methylase TVN0850 884896 - 885567 + | metal-dependent hydrolase TVN0851 885929 - 885564 - | nucleic acid-binding protein TERM 429 885751 - 885762 + g 85 -2.2 -5.75945 | TATTGATAGGCAATT CGTG CCGT TACG TTTTTTTTAGCGAGT TVN0852 886521 - 885910 - | 2-phosphoglycerate kinase TVN0853 887105 - 886521 - | nicotinamidase-like amidase TVN0854 887209 - 887952 + | dolichol-phosphate-mannosyltransferase TVN0855 888279 - 887956 - | hypothetical protein TERM 430 888035 - 888046 + g 71 -4.4 -4.84359 | overlap 888023 CGAGGCATAACACTG CCTT TTCT AAGG TTTTTCTCCAGATAC TVN0856 889953 - 888403 - | family X DNA polymerase TERM 431 889187 - 889171 - G 73 -8.7 -3.53012 | TTTGCTGCCCGTAAA GTACTGC ATT GCAGCAC CGAAGCTCTCCTTAG TVN0857 890362 - 890000 - | hypothetical protein TVN0858 891058 - 890402 - | metal-dependent hydrolase TVN0859 891320 - 891084 - | nucleic-acid-binding protein (Zn-ribbon) TVN0860 891399 - 891770 + | hypothetical protein TVN0861 892583 - 891777 - | prephenate dehydratase TERM 432 892683 - 892716 + r 71 -7.7 -3.58343 | opp_overlap 892698, overlap 892678 892676 892685 ATATTTAGTTTCTGT TATACTGATATAATA GATA TATTATATCGGTATC TTTAAAACTAATAGG TERM 433 892685 - 892714 + r 85 -10.3 -3.36991 | opp_overlap 892698, overlap 892678 892676 892683 ATTTAGTTTCTGTTA TACTGATATAATA GATA TATTATATCGGTA TCTTTAAAACTAATA TVN0862 893913 - 892969 - | cell wall biosynthesis glycosyltransferase TVN0863 895104 - 893971 - | glycosyltransferase TVN0864 896554 - 895451 - | glycosyltransferase TERM 434 896600 - 896625 + H 73 -9.1 -2.86661 | opp_overlap 896600, overlap 896594 TTTTCCTCCCATTAA TGCAGTATAAC TATT GTTATACAGCA TACTGTTATTGCATT TERM 435 896625 - 896600 - H 74 -9.1 -3.14132 | opp_overlap 896594 896600 TTTTCCTCCCATTAA TGCAGTATAAC TATT GTTATACAGCA TACTGTTATTGCATT TVN0865 897346 - 897522 + | transposase TVN0866 897658 - 898023 + | hypothetical protein TERM 436 898351 - 898338 - g 82 -6.7 -4.87592 | TCACACACAAGAAAA CAACG CGAT CGTTG AAAGAGCCAACAAGA TVN0867 898063 - 898533 + | hypothetical protein TVN0868 899173 - 898622 - | hypothetical protein TVN0869 899600 - 900412 + | cell wall biosynthesis glycosyltransferase TERM 437 900564 - 900575 + F 71 -3 -5.11033 | AAACTCATTAAGATC CAAA CTGA TTTG TTTTTTAGCCTTGTG TVN0870 901335 - 901553 + | hypothetical protein TERM 438 902043 - 902029 - f 79 -4.4 -5.37043 | opp_overlap 902029 902031 ACGTTAGATAAAAAA TATTAT GAG ATAATA GTTATAGAAAAATTA TVN0871 902108 - 902620 + | cell wall biosynthesis glycosyltransferase TERM 439 903049 - 903029 - f 72 -4.7 -4.81752 | AAAAATATTTAAAAA CAAACAACC AAT GAGTGTTTG TAAAAATATGAAAGA TERM 440 903998 - 903970 - g 100 -15.3 -3.07443 | opp_overlap 903965 903970 CTATAGTCGAGGGAA TGCCATCGCCACC TCT GGAAGCGATGGCA TGTGGTTGTGCTGTA TERM 441 903970 - 903998 + G 95 -13.1 -2.98786 | opp_overlap 903970, overlap 903965 CTATAGTCGAGGGAA TGCCATCGCCACC TCT GGAAGCGATGGCA TGTGGTTGTGCTGTA TVN0872 903798 - 904250 + | glycosyltransferase TVN0873 905596 - 904721 - | SAM-dependent methyltransferase TERM 442 907549 - 907588 + H 87 -11.6 -3.2348 | gap 1, opp_overlap 907575, overlap 907550 907553 907576 907577 TATTTTAGGCATTTT C-CGATGTTGCAACTGGTG TTG CAACAGTTGCAACATAGTG TTGCATATTCATTTT TERM 443 907550 - 907586 + H 100 -15.3 -3.16618 | opp_overlap 907575, overlap 907549 907553 907576 907577 ATTTTAGGCATTTTC CGATGTTGCAACTGGTG TTG CAACAGTTGCAACATAG TGTTGCATATTCATT TERM 444 907553 - 907583 + H 100 -15.6 -2.77678 | opp_overlap 907575, overlap 907550 907549 907576 907577 TTAGGCATTTTCCGA TGTTGCAACTGGTG TTG CAACAGTTGCAACA TAGTGTTGCATATTC TERM 445 907577 - 907593 + H 79 -9.5 -3.46008 | opp_overlap 907575, overlap 907553 907550 907549 907576 TGGTGTTGCAACAGT TGCAACA TAG TGTTGCA TATTCATTTTATCCT TERM 446 907756 - 907766 + H 72 -2.6 -5.24796 | overlap 907762 ATAATGACCTTTCAG TTTT TCT AAAA TTTTTATTCTGTACG TERM 447 908215 - 908226 + H 70 -4.4 -4.71828 | opp_overlap 908211 908215, overlap 908211 AGCGGAAGCAAGGAA TGCA ACAT TGCA TTTTGTTGATGAAAT TERM 448 908436 - 908458 + H 77 -10 -3.0806 | overlap 908439 AGGTTTTATAAATGG TAATTTGGCA CAT TGCCAGATTA TATTGAAAATTTAAA TVN0874 908448 - 908765 + | integrase/recombinase TVN0875 910003 - 909830 - | aldo/keto reductase TERM 449 910375 - 910392 + r 76 -4.3 -5.03405 | opp_overlap 910375, overlap 910367 910368 TTATCTTTTATAAAA TAATAAA TTTT TTTATTA TTTTTATATGGTATT TVN0876 911451 - 910396 - | cell wall biosynthesis glycosyltransferase TERM 450 910880 - 910868 - G 89 -6.3 -5.29742 | opp_overlap 910867 910868 AGACAAAAAAAGAAA CACAT ATC ATGTG CTATTCTTATATTTT TVN0877 912704 - 911574 - | glycosyltransferase TERM 451 912103 - 912114 + g 79 -3 -5.27769 | AGGATTATATTATCC CTTT CATG AAAG TTTTTAGTTTTTTGT TVN0878 913169 - 912906 - | translation initiation factor IF-1 TERM 452 913430 - 913403 - R 80 -7.2 -4.59109 | gap 1, overlap 913405 TATACCTCTTAAAAA TCTGTG-GAAACT GAC AGTTTCGCACAAA AATCTGTTATTTAGC TVN0879 916074 - 913498 - | hypothetical protein TERM 453 915231 - 915243 + g 100 -3.5 -5.95286 | overlap 915237 ATACCTGAAATTTAT TATTT TTA AAATA TTTTTTATTTTTAAT TERM 454 915237 - 915250 + g 70 -2.5 -4.98616 | overlap 915231 GAAATTTATTATTTT TAAAA TATT TTTTA TTTTTAATGTTTTCG TERM 455 917125 - 917137 + r 72 -2.7 -5.38958 | CCAATCATCCAGACA TTTCG TTG TGAAA TTTTTATTTATAGAT TVN0880 918762 - 917701 - | glycosyltransferase TERM 456 919781 - 919795 + G 73 -2.9 -5.22312 | opp_overlap 919781 ATAGAATAAAATTAT TGTTT GGTAA AAACA TTTTTTGGTCTAAAT TVN0881 919339 - 920010 + | SAM-dependent methyltransferase TVN0882 921433 - 921852 + | hypothetical protein TVN0883 922132 - 922512 + | hypothetical protein TVN0884 923542 - 922748 - | cell wall biosynthesis glycosyltransferase TVN0885 924280 - 923753 - | hypothetical protein TVN0886 925968 - 924334 - | hypothetical protein TERM 457 925709 - 925695 - G 71 -4.3 -4.83243 | TTGATATAAAATAAA TAGGA ATCGA TCCTA ACGAAATAAAAAAAT TERM 458 926798 - 926770 - g 100 -11.1 -4.24711 | CAAAAGCTGAACAAA TACCTCGGTTCTA ACA TTGAACCGAAGTA CGTGGAGAACCCAAT TVN0887 926017 - 926940 + | nucleoside-diphosphate-sugar epimerase TERM 459 927106 - 927088 - g 74 -4.7 -4.78839 | overlap 927094 AATTCGACAACAAAA TTAGAAT TTCTT ATTCTAA GACAGAAATGGTAGA TVN0888 926937 - 927911 + | kinase related to galactokinase and mevalonate kinase TERM 460 928499 - 928510 + G 78 -5.8 -4.84359 | GTGCGTCTCAGGTCG GAGC TGTT GCTC TTTTTATAGCAATCA TVN0889 928372 - 929892 + | O-antigen and teichoic acid export protein TVN0890 930644 - 932389 + | acylaminoacyl-peptidase TVN0891 933646 - 934671 + | glycosyltransferase TVN0892 936231 - 935209 - | cell wall biosynthesis glycosyltransferase TERM 461 936567 - 936586 + H 76 -4.4 -5.03314 | AACTTATTGATCTTA CTATTATT TCTA GATAATAG TTTTTTGAAGGTACA TVN0893 937737 - 939251 + | gamma-glutamyltranspeptidase TVN0894 939308 - 940537 + | sugar transport permease TVN0895 943640 - 940548 - | Tricorn protease TVN0896 943731 - 944468 + | SAM-dependent methyltransferase TVN0897 945029 - 944469 - | hypothetical protein TVN0898 945253 - 946674 + | amino acid transporter TVN0899 947223 - 948272 + | dTDP-glucose pyrophosphorylase TVN0900 948279 - 949121 + | dTDP-4-dehydrorhamnose reductase TVN0901 949118 - 949657 + | dTDP-4-dehydrorhamnose 3,5-epimerase TVN0902 949654 - 950610 + | dTDP-D-glucose 4,6-dehydratase TVN0903 951870 - 952253 + | hypothetical protein TERM 462 953179 - 953193 + G 79 -8.6 -4.19258 | GAGCGGATCTAATTT GGCTTA TCT TAAGCC TTTTCAGTAAAGTAT TVN0904 952290 - 953267 + | cell wall biosynthesis glycosyltransferase TVN0905 953314 - 954084 + | nucleoside-diphosphate-sugar epimerase TERM 463 954575 - 954587 + F 71 -7.7 -3.66784 | TCCATATCTAGTGGG TCAGG AAG CCTGA TTATGTTCGAAATCA TVN0906 955769 - 956419 + | DNA-binding protein TVN0907 958321 - 956954 - | major facilitator superfamily permease TERM 464 957308 - 957292 - G 77 -6.5 -4.6526 | opp_overlap 957293, overlap 957294 ACAAAGTTCCAAAAA CGCCG GCGAGCA CGGCG GATGCTATTATACCC TVN0908 959517 - 958399 - | carnitine dehydratase TERM 465 958719 - 958735 + g 72 -8.1 -3.86346 | TCAGCGTATCACGCT TGCTATA ACG TATAGCA TTTGTAGGAAACTCA TERM 466 958901 - 958916 + g 74 -7.6 -3.92001 | GGTTTTAACTCTTTT CCTATC AATT GATAGG TTGTTATGTGCTGTC TVN0909 960548 - 959514 - | isopropylmalate synthase TVN0910 961809 - 960913 - | proline iminopeptidase TERM 467 961503 - 961519 + gr 73 -3.7 -5.06414 | CCATGAGAAATACCT TATCGTC GCC GAAGATA TTTTTCTTAACAGCC TVN0911 963184 - 961784 - | amino acid transporter TERM 468 962185 - 962173 - GH 73 -9.1 -2.88737 | opp_overlap 962172 962172 962170, overlap 962172 TAACCATCACTAAAC CCGCA AAA TGCGG CGTCTTCCTCTTTTC TERM 469 962232 - 962219 - GH 74 -4.5 -4.84017 | AACTTCGGACAAAAA GCGTG GAAG CACAC CATCCCTGCTCATGG TVN0912 963693 - 965471 + | acylaminoacyl-peptidase TVN0913 965581 - 965928 + | hypothetical protein TVN0914 967317 - 965932 - | metal-dependent hydrolase TVN0915 967872 - 968612 + | enoyl-CoA hydratase TVN0916 970615 - 968891 - | cobalamin biosynthesis protein (CbiG-related)/precorrin-6Y methylase TERM 470 969028 - 969038 + g 71 -6.8 -4.1899 | TAACCTCAGTGCTTC CGGA TAT TCCG TTTTCGATAAGATAA TERM 471 969329 - 969343 + g 77 -8.6 -4.02334 | opp_overlap 969329 GCCGGTGAATAGGAA GGCTAT CCT ATAGCC TTTATCGTATAGATC TVN0917 971366 - 970612 - | precorrin-4 methylase TVN0918 972064 - 971375 - | precorrin-2 methylase TERM 472 971539 - 971526 - G 75 -2.3 -5.27335 | opp_overlap 971526 CTTTCTAAAGAAAAA GATCC TGTC GGAAC TTTCATTATAACTAC TVN0919 972678 - 972073 - | precorrin-6Y methylase cbiD 973801 - 972668 - | cobalt-precorrin-6A synthase TVN0921 974543 - 973788 - | precorrin-3B methylase TERM 473 974084 - 974098 + g 70 -5.6 -4.31692 | opp_overlap 974083 974074 974086, overlap 974086 CCAAATCAAGGATAG CAGCCG CCT CGGCTC TTTTCCTGATGACTT TERM 474 974086 - 974096 + g 75 -8.2 -3.7574 | opp_overlap 974086 974083 974074, overlap 974084 AAATCAAGGATAGCA GCCG CCT CGGC TCTTTTCCTGATGAC TVN0922 975250 - 974537 - | precorrin isomerase TVN0923 976076 - 975318 - | uroporphyrinogen-III methylase TERM 475 975921 - 975944 + g 71 -3.3 -4.9792 | gap 1, overlap 975924 CCTGTGCCCTACGTT TACCTGTACT TTATT AGTACAG-TA TTTTTCTATAAGATC TERM 476 975924 - 975942 + g 73 -7.5 -4.11141 | overlap 975921 GTGCCCTACGTTTAC CTGTACT TTATT AGTACAG TATTTTTCTATAAGA TVN0924 976717 - 976073 - | siroheme synthase TERM 477 976754 - 976729 - R 74 -6.3 -4.37711 | opp_overlap 976728 976731 TCATTAAACGGAAAA TACTAAAGTAT ATTT AAACTTTAGTA AGTTTACTTAACATA TVN0925 977111 - 976779 - | hypothetical protein TVN0926 977878 - 977291 - | aspartokinase beta subunit TERM 478 977489 - 977514 + g 73 -2.5 -5.21236 | overlap 977491 TAAGCTCACGTCCCT CTGTACCTGAA CGTC TTTTGGTACTG TTTTTGTTCTCGATT TVN0927 978001 - 979194 + | argininosuccinate synthase TERM 479 979242 - 979221 - g 70 -5.8 -4.25104 | GGCGGGGCAGCAAAA CCCTCGGA ATATGA TCCGATGG AATACCTGGTCAAAT TVN0928 979191 - 980504 + | argininosuccinate lyase TVN0929 981339 - 980491 - | gluconolactonase TVN0930 981501 - 982439 + | Zn-dependent hydrolase TVN0931 982485 - 983765 + | tryptophan synthase subunit beta TERM 480 983819 - 983805 - f 78 -7.2 -4.35874 | opp_overlap 983798 983804, overlap 983798 983808 TAATACAATGTAAAA CTACAA CTT TTGTAG CTGAATTATAAAAAA TERM 481 985775 - 985807 + G 82 -2.1 -5.72118 | opp_overlap 985769, overlap 985776 985800 GATCCAATACCTGTT ATTTCATCACAGA ATCCAGA TATGTGATGAAAC TTTTTTATCTTTTTT TVN0932 984086 - 985801 + | Fe-S oxidoreductase TERM 482 985800 - 985816 + F 79 -4.5 -5.2189 | overlap 985776 985775 AGAATCCAGATATGT GATGAAA CTT TTTTATC TTTTTTAATCATTAA TVN0933 985839 - 986240 + | hypothetical protein TVN0934 986370 - 986825 + | transcription regulator TERM 483 987539 - 987529 - gf 70 -8.2 -3.30443 | opp_overlap 987531 TCAGGATCAGATGAA GCCG AGG CGGC CCGCTATTATCCAAA TVN0935 986776 - 987795 + | ABC-type multidrug transport system, ATPase component TERM 484 987866 - 987883 + G 75 -3.4 -5.1925 | overlap 987868 CAGTGTATTTAATTG TAGGCT TGCTAC AGCCTG TTTTTTGGATTATAC TVN0936 987796 - 988599 + | ABC transporter permease TVN0937 988703 - 989851 + | Fe-S oxidoreductase TVN0938 989857 - 990507 + | metal-dependent transcription regulator TVN0939 991977 - 990514 - | amino acid transporter TERM 485 990991 - 990977 - G 73 -5.7 -4.41422 | overlap 990974 TCAGAGAGAAAAGAA GGAAG TGCAC CTTCC CTTGCCATTGAGAAT TERM 486 991253 - 991276 + g 74 -4.6 -4.87807 | gap 1 ATAGTAACGAGTATC GCCAAAG-GAA CGT TTCTCTTCGGC TTTTTCGTCTCTTCA TVN0940 992372 - 992082 - | hypothetical protein TVN0941 992562 - 993143 + | hypothetical protein TVN0942 993754 - 993131 - | HAD superfamily hydrolase TVN0943 994552 - 993767 - | molybdopterin/thiamine biosynthesis dinucleotide-utilizing protein TVN0944 994641 - 995648 + | putative alcohol dehydrogenase TVN0945 996071 - 995673 - | metal-dependent transcription regulator TVN0946 996182 - 996343 + | hypothetical protein TERM 487 997654 - 997639 - g 80 -9 -4.05389 | GATACATACCAGAAA CATGCC TCTA GGCATG GACGAGGAGCAGAAA TERM 488 997682 - 997672 - g 78 -5.4 -4.93296 | overlap 997676 CGAGGAGCAGAAAAA CAAG TTC CTTG AGGAAATGGCTGACT TVN0947 996521 - 998758 + | ATPase of the AAA+ class involved in cell division TVN0948 999549 - 999061 - | hypothetical protein TVN0949 1000425 - 999664 - | translation initiation factor IF-2B subunit delta TVN0950 1001269 - 1000457 - | aldose 1-epimerase TVN0951 1001742 - 1001389 - | hypothetical protein TERM 489 1001757 - 1001780 + r 87 -11.2 -3.17941 | opp_overlap 1001763, overlap 1001763 TCTCTCATTGGCTTT GTCAAATATC CGTT GATATTTGAC TTCCTGCCATCTGCT TVN0952 1002939 - 1001758 - | transposase TERM 490 1003019 - 1003029 + H 79 -5.4 -5.0538 | TGAAAAGTATATCTT CGTT CAT AACG TTTTTTAAAATGCGG TVN0953 1003103 - 1003975 + | hypothetical protein TVN0954 1004364 - 1005578 + | glycosyltransferase TVN0955 1005629 - 1006378 + | SAM-dependent methyltransferase TVN0956 1007034 - 1006486 - | phosphoheptose isomerase TERM 491 1007211 - 1007192 - g 80 -5 -5.08824 | TCGTTACTGAAAAAA GCCACCAT AATA ATAGTAGC TGTAGCGGTAATAGT TVN0957 1007165 - 1007935 + | hypothetical protein TVN0958 1007925 - 1008755 + | ABC transporter permease TVN0959 1008752 - 1009639 + | ABC-type multidrug transport system, ATPase component TVN0960 1009839 - 1010750 + | glycerate dehydrogenase TVN0961 1010767 - 1011675 + | hypothetical protein TVN0962 1011780 - 1012727 + | hypothetical protein TERM 492 1012720 - 1012710 - f 76 -4 -5.24003 | AATAAAAATGAAAAA GATA TAA TATC GCCTTGATTATCTTG TERM 493 1013126 - 1013147 + G 74 -6.5 -4.41716 | opp_overlap 1013126, overlap 1013128 1013130 CCAATTTTCAACACA CCTGCCCTC ACTG GAGGGTATG TTTATTATCTGATCT TERM 494 1013128 - 1013145 + G 72 -7.7 -3.80466 | opp_overlap 1013126, overlap 1013126 1013130 AATTTTCAACACACC TGCCCTC ACTG GAGGGTA TGTTTATTATCTGAT TVN0963 1012742 - 1014811 + | hypothetical protein TVN0964 1014789 - 1016708 + | hypothetical protein TVN0965 1017915 - 1016719 - | putative inner membrane protein TERM 495 1017864 - 1017848 - G 86 -8.7 -4.24422 | overlap 1017860 CTATAAGAAAGTAAA GCTAGCC CAA AGCTAGC TACTGCGAGAAGGAT TERM 496 1018307 - 1018283 - g 73 -3.6 -4.95843 | gap 1 ATACAAAAGATAAAA GGAG-GAAGCT ATAT AGTTTCACTCC CGTCTGACTGGGTCA TVN0966 1018247 - 1019152 + | phosphate uptake regulator TERM 497 1019620 - 1019608 - g 74 -4.1 -5.00339 | ATTAAGAAGGAAAAA GAATG TGA CATCC AAGAATAGTATTCTG TVN0967 1019249 - 1019998 + | permease TVN0968 1020524 - 1020030 - | hypothetical protein TVN0969 1021134 - 1020565 - | hypothetical protein TERM 498 1021275 - 1021291 + r 72 -9.5 -2.62616 | opp_overlap 1021287 TCGATCCCCCGACCT GCTGATT ACG AATCAGC TGCTCTACCAACTGA TVN0970 1022522 - 1021365 - | hypothetical protein TVN0971 1023365 - 1022523 - | endonuclease IV TERM 499 1022959 - 1022974 + g 73 -2.6 -5.21236 | gap 1 TGTGTTTCAACCTTC TCAATGG CTT CC-TTGA TTTTTCTTATCCCTT TVN0972 1024084 - 1023371 - | transcription regulator TERM 500 1025140 - 1025124 - g 83 -9.5 -3.94 | GGAAGCCTCAAATAA CTACGAT TAC ATCGTAG TAAATGCTGCGCTTC TERM 501 1025254 - 1025239 - g 70 -2.6 -5.00642 | GAACCTAGAGAAAAA TTAGTC GATA AACTAA GCAACATCTCGAAGG TVN0973 1024312 - 1025493 + | bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase TVN0974 1025483 - 1026247 + | amidohydrolase TVN0975 1026954 - 1026250 - | alpha/beta superfamily hydrolase TERM 502 1028269 - 1028255 - g 73 -5.6 -4.4784 | overlap 1028257 CAAACGGCAAAGAAA CCCCGC TTG GCAAGG GCCTTGCAGCTTCCC TERM 503 1028273 - 1028296 + G 81 -11.8 -2.56288 | opp_overlap 1028257, overlap 1028271 1028286 CGCTTGGCAAGGGCC TTGCAGCTTC CCCT GGAGCTGCAA TAGGTTCCATAGTTT TVN0976 1027096 - 1029756 + | pyruvate phosphate dikinase TVN0977 1030194 - 1029778 - | DNA-binding protein TVN0978 1030594 - 1030250 - | ferredoxin TVN0979 1030681 - 1031550 + | ribokinase family sugar kinase TVN0980 1031698 - 1032219 + | acetyltransferase eno 1032254 - 1033459 + | phosphopyruvate hydratase TVN0982 1033444 - 1034064 + | diphthine synthase TVN0983 1034796 - 1034191 - | transcription regulator TVN0984 1035347 - 1034799 - | molecular chaperone (small heat shock protein, hsp20-related) TERM 504 1035126 - 1035147 + g 70 -8.1 -3.70902 | gap 1 AATCCCAGGCACGTT GCCGA-ATTC CTG GAATATCGGC TTTCCATCTGACCCA TVN0985 1038440 - 1035393 - | transporter TVN0986 1038522 - 1039754 + | S-adenosyl-L-homocysteine hydrolase TERM 505 1039738 - 1039765 + T 91 -12.1 -3.65656 | opp_overlap 1039737 1039757, overlap 1039757 AATACCTTAATTCAT GGGATGAGGGT ACCTAA ACCCTCATTCC TTATCTATATACTGG TVN0987 1041084 - 1039759 - | seryl-tRNA synthetase TVN0988 1042187 - 1041141 - | Kef-type K+ transporter NAD-binding component TERM 506 1042131 - 1042147 + g 70 -2.9 -5.07053 | overlap 1042133 CATAAAAACTTTCGT AAGAGGG CTG CTCTCTA TTTTTTGCAATACTT TVN0989 1043445 - 1042450 - | tyrosyl-tRNA synthetase TVN0990 1043574 - 1043834 + | lipoate-protein ligase A TVN0991 1043836 - 1044624 + | lipoate-protein ligase A TERM 507 1045924 - 1045914 - g 76 -6.8 -4.56978 | TCCGGAAATAATAAA TGCG AAG CGCA TAACAAGAATTGCAC TVN0992 1044736 - 1046103 + | signal recognition particle protein Srp54 TVN0993 1047286 - 1046096 - | geranylgeranyl reductase TVN0994 1047485 - 1047273 - | ferredoxin subunit of tungsten formylmethanofuran dehydrogenase TERM 508 1047673 - 1047688 + r 77 -4.8 -5.13343 | opp_overlap 1047673 1047675 TGTCATTCTTAAAAT TACAAT GCAT ATTGTA TTTTATTTTCGCTTA TVN0995 1048567 - 1047701 - | coiled-coil protein TERM 509 1048263 - 1048276 + g 75 -5.3 -4.8048 | TCAATGACAAACTCC CTCAA GTCT TTGAG TTTTTCATCTGAAGG asnC 1048762 - 1050051 + | asparaginyl-tRNA synthetase TERM 510 1050125 - 1050110 - T 72 -8.2 -3.51076 | GGATTAGACAATTAA GGCCGC AGAC GCAGCC ACCGTAAGGAATGAG TVN0997 1050802 - 1050098 - | hypothetical protein TERM 511 1050324 - 1050309 - G 70 -3.9 -4.77567 | ATTGCGATAATAAAA CCGCC AAGAAG GGCAG CTAATTCGCCGGTTA TVN0998 1051826 - 1050816 - | pyridoxine biosynthesis protein TERM 512 1052049 - 1052018 - g 100 -12.4 -4.30844 | ATTTGACGATGAAAA CCGCCTCTACTATA TGCT TAAAGTAGAGGCAG CAATATCAAAGGCAG TVN0999 1051950 - 1053296 + | adenylosuccinate lyase TERM 513 1053730 - 1053719 - g 81 -4.4 -5.26316 | GGATCTTATAAAAAA GCTT GCAG AAGC GGGGATAAGGATCTC TVN1000 1053297 - 1053887 + | hypothetical protein TVN1001 1054510 - 1053893 - | ATPase TVN1002 1055338 - 1054535 - | thiamine monophosphate kinase TERM 514 1054957 - 1054971 + g 73 -8.6 -3.57808 | opp_overlap 1054934, overlap 1054955 CCTCTAGCCGTGGAG TGATGC CAA GCATCA TGTTTATCCCTTCCA TVN1003 1057059 - 1055578 - | single-stranded DNA-specific exonuclease TERM 515 1056703 - 1056689 - G 74 -5 -4.77719 | opp_overlap 1056689 GAAAATTCAAGAAAA GAAAGA ATA TCTCTC TTATGATCCTCGTCT TERM 516 1056993 - 1057007 + g 72 -10 -2.79183 | CTCTAAGTATTTCTC TGGCAG CTA CTGCCA TCTCGTAGAGATCCC TVN1004 1058108 - 1057056 - | Fe-S oxidoreductase TVN1005 1058196 - 1059341 + | aspartate aminotransferase TVN1006 1059400 - 1060320 + | homoserine kinase TVN1007 1060298 - 1061416 + | cystathionine beta-lyase or cystathionine gamma-synthase TVN1008 1062076 - 1061681 - | hypothetical protein TVN1009 1063258 - 1062110 - | translation-associated GTPase TVN1010 1064915 - 1063293 - | Fe-S oxidoreductase TVN1011 1065993 - 1065076 - | heat shock protein HtpX TVN1012 1066198 - 1067415 + | ATPase TERM 517 1067937 - 1067921 - g 75 -5.1 -4.83169 | ACGGCTTTAGAAAAA GCTGAAA AGA TTACAGC TTCAGATGATCTTTC TVN1013 1067417 - 1068265 + | hypothetical protein TVN1014 1068262 - 1068999 + | hypothetical protein TVN1015 1068996 - 1070228 + | ATPase TVN1016 1071519 - 1070221 - | NhaP-type Na+/H+ antiporter nadE 1072250 - 1071522 - | NAD synthetase TERM 518 1071654 - 1071630 - G 100 -12.3 -3.53012 | opp_overlap 1071632 TTCTCCCTTGTCAAA GATCGATGACA AAA TATCATCGATC TTAGAATATGGCATA TERM 519 1071705 - 1071717 + g 75 -5.5 -4.74611 | TTGGCCCTGCCATAG GCCTG CAG TAGGC TTCTTTTTTATAATA TVN1018 1073301 - 1072456 - | 5,10-methylene-tetrahydrofolate dehydrogenase TERM 520 1072895 - 1072878 - G 86 -11.3 -3.32914 | ATTTAAGTATATCAA CTACGGC CATA GCCGTAG CGGGGACAAGAAATT TERM 521 1073211 - 1073225 + g 78 -4.2 -5.23016 | overlap 1073213 GAAGTAGGACAAGCC TTGGTG AAA CACCCA TTTTTTCGATTCTTT TVN1019 1074377 - 1073292 - | glucose 1-dehydrogenase TERM 522 1075701 - 1075687 - g 81 -7.2 -4.65895 | opp_overlap 1075687 CTCTGCATCTAAAAA GAGATT CAG AATCTC TCAGTTTTGCCGATC TVN1020 1074483 - 1076108 + | pyruvate kinase TVN1021 1077605 - 1076124 - | NAD-dependent aldehyde dehydrogenase TERM 523 1077900 - 1077880 - R 71 -7.7 -3.53012 | opp_overlap 1077879, overlap 1077892 TGCTTGTGGCTGAAA GTAAATAGA AAA TCCATTTAC ATAGTATATAGATCT trpC 1078655 - 1077942 - | indole-3-glycerol-phosphate synthase TVN1023 1079203 - 1078652 - | anthranilate synthase component II TVN1024 1080255 - 1079200 - | anthranilate synthase component I TVN1025 1080832 - 1080245 - | N-(5'-phosphoribosyl)anthranilate isomerase trpD 1081793 - 1080804 - | anthranilate phosphoribosyltransferase TERM 524 1081057 - 1081088 + gr 83 -6.7 -4.84359 | gap 1, overlap 1081058 TTATCGTACCTTACG T-CGTTGGAGATGG ATCTG CCATCTACAACGTA TTTTTCTACAGATCC TERM 525 1081058 - 1081086 + gr 100 -11.8 -4.04397 | overlap 1081057 TATCGTACCTTACGT CGTTGGAGATGG ATCTG CCATCTACAACG TATTTTTCTACAGAT TVN1027 1082511 - 1081798 - | tryptophan synthase subunit alpha TVN1028 1083317 - 1082508 - | hypothetical protein TVN1029 1083726 - 1083343 - | hypothetical protein TVN1030 1084394 - 1083723 - | methylase involved in ubiquinone/menaquinone biosynthesis TVN1031 1084693 - 1084391 - | hypothetical protein TVN1032 1086789 - 1084690 - | ATPase involved in replication control TERM 526 1086363 - 1086382 + g 85 -4.2 -5.46698 | overlap 1086364 TTAACTCGTGGCAAT TGCTGCAT TCAA AGGCAGCG TTTTTTAATTTTGGA TERM 527 1086676 - 1086698 + g 71 -9.2 -2.95284 | overlap 1086673 1086680 CACATAGAGTGTTCT TACTTCAGGA TAG TCCTGATGTA TGCTATTTATCTTAT TVN1033 1087473 - 1086877 - | aspartokinase beta subunit TERM 528 1087854 - 1087840 - H 75 -8.6 -3.51825 | GGACTTTAATTATAA CTCTGT TTT ACAGAG GCGCATTTATAATTG ppnK 1087952 - 1088770 + | inorganic polyphosphate/ATP-NAD kinase TVN1035 1088757 - 1089125 + | hypothetical protein TVN1036 1091037 - 1089346 - | amino acid transporter TERM 529 1091066 - 1091090 + H 76 -10.1 -2.83894 | opp_overlap 1091064 1091088 ACATGGTCATATATT TTGTTTTCGTG TAT CACGATAACAA TGTACTGATGGTACT TERM 530 1092202 - 1092192 - g 87 -5.4 -5.48825 | GATGATGGAAAAAAA CTGA TAC TCAG GACGCATACAACGGT pheS 1091235 - 1092683 + | phenylalanyl-tRNA synthetase subunit alpha TERM 531 1093459 - 1093479 + G 84 -9.8 -3.90241 | opp_overlap 1093458 TTCTGTATCATATAG GTATAGGC TTTTT GCCTATAC TTCTTCTGCTTCATA TVN1038 1092836 - 1093558 + | hypothetical protein TERM 532 1093672 - 1093661 - g 75 -7.2 -4.28589 | AAAAAGTATGTAAAA GGCC CTGA GGCC CTGAAATCTATTTCT TVN1039 1093610 - 1094530 + | ABC-type daunorubicin transport system, ATPase component TVN1040 1094511 - 1095254 + | ABC-type multidrug transport system, permease component TVN1041 1095567 - 1095337 - | transposon-encoded protein TVN1042 1096917 - 1095610 - | ammonia permease TERM 533 1095981 - 1095958 - G 75 -2.4 -5.40072 | CCTCTTCGAAAAAAA CCTATTTGCA AAAA TGAAAATTGG ACCGCCTAAAATGCC TERM 534 1097572 - 1097582 + H 72 -2.6 -5.24796 | overlap 1097578 CATAGACTTCATCAG TTTT TCT AAAA TTTTTATTCTGTACG TERM 535 1098771 - 1098785 + G 76 -2.8 -5.40625 | overlap 1098767 1098765 ATATTTTTATGTGGA CTATCG GGT CCATAG TTTTTTATCTAATAT TVN1043 1098308 - 1099635 + | major facilitator superfamily permease TVN1044 1099680 - 1100789 + | AAA family ATPase TVN1045 1102599 - 1100740 - | DNA polymerase I TERM 536 1101732 - 1101718 - G 81 -7.2 -4.70169 | opp_overlap 1101717 1101713 1101728 GTACATTGAAGAAAA GTCTAT TTC ATAGAC ATCTCTATATATCCC TVN1046 1102778 - 1102602 - | hypothetical protein TVN1047 1103214 - 1102801 - | hypothetical protein TVN1048 1103735 - 1104505 + | ABC-type Fe3+-siderophores transporter, solute-binding component TVN1049 1106725 - 1104527 - | elongation factor EF-2 TERM 537 1104854 - 1104866 + g 74 -7.7 -3.90856 | CTTTTGGACTGGTTC GAGGA GTA TCCTC TTTGCTTCGCACATT rps10p 1107076 - 1106762 - | 30S ribosomal protein S10P TVN1051 1108356 - 1107082 - | elongation factor 1-alpha TERM 538 1107161 - 1107175 + g 79 -8.6 -4.18197 | AACCTTCCAAGCTGC GGTATC TCG GATACC TTTTCAATCACCAAT TERM 539 1107889 - 1107908 + g 87 -6.4 -5.09762 | opp_overlap 1107874 1107889 CCTCTTTTCACTGAA TGGAGGCT CAGT AGCATCCA TTTTGTTTATTGCGA moaA 1108542 - 1109522 + | molybdenum cofactor biosynthesis protein A TVN1053 1109669 - 1110889 + | major facilitator superfamily permease TVN1054 1112447 - 1110903 - | NAD-dependent aldehyde dehydrogenase TVN1055 1112677 - 1112501 - | hypothetical protein TVN1056 1113848 - 1112685 - | arsenite transporting ATPase TVN1057 1114838 - 1113858 - | octaprenyl diphosphate synthase TERM 540 1114966 - 1114947 - R 79 -9.4 -3.48288 | TAAGTTATAGTATAA TTATGTGC ATTC GCACATAA CCTGACATTCTTTCC TVN1058 1115703 - 1115434 - | chromatin protein TVN1059 1116040 - 1116741 + | 3-oxoacyl-[acyl-carrier-protein] reductase TVN1060 1117951 - 1116776 - | major facilitator superfamily permease TERM 541 1117056 - 1117045 - G 70 -7.2 -3.87378 | AAATGAAGTACGAAA CGGC TATT GCCG AAAGTAATCTTGTTA TERM 542 1118563 - 1118549 - g 76 -2.8 -5.28942 | opp_overlap 1118536 1118551, overlap 1118536 1118551 TACTCCAAATAAAAA TGGAGA TTG TCTCTA TATTAAGGAATGGTA TVN1061 1118431 - 1118709 + | hypothetical protein TVN1062 1119464 - 1118724 - | DNA polymerase sliding clamp TVN1063 1120467 - 1119628 - | hypothetical protein TVN1064 1121769 - 1120468 - | hypothetical protein TVN1065 1122725 - 1121766 - | MoxR-like ATPase TERM 543 1122344 - 1122374 + g 89 -11.3 -3.47516 | opp_overlap 1122353, overlap 1122363 GAACTTCCTCCATGG CCTCCAGAAGG-GCA GAC TGCACCTTC-GGAGG TGTTCTGTTAATTTC TVN1066 1123095 - 1122712 - | hypothetical protein TVN1067 1123753 - 1123172 - | hypothetical protein TERM 544 1123671 - 1123688 + g 73 -2.7 -5.1861 | opp_overlap 1123671 TTCTTCTTTATAAAC GAAAAGA CTGA TCTCTTC TTTTTTGGTACTGAA TVN1068 1126494 - 1123753 - | hypothetical protein TERM 545 1126252 - 1126269 + g 74 -6.3 -4.47328 | TGATGAAGTTGCATT GTAAGCG TATC CGTTTAC TTTTATCGTCGCATT TVN1069 1128259 - 1126727 - | queuine tRNA-ribosyltransferase TERM 546 1127419 - 1127397 - G 78 -9.8 -3.53761 | overlap 1127398 TAAGTTTCTTCTAAA TCCCTTGGCA CCA CGCCAAGGGG TGAGGTTACGATGAT TERM 547 1127418 - 1127398 - G 93 -13.3 -2.72043 | overlap 1127397 AAGTTTCTTCTAAAT CCCTTGGCA CCA CGCCAAGGG GTGAGGTTACGATGA TERM 548 1127715 - 1127726 + g 71 -4.4 -4.83615 | ATTTCAGCTGCTTTA CTTG ATAC CAAG TTTTTCTCCACGATG truA 1129511 - 1128771 - | tRNA pseudouridine synthase A TVN1071 1130524 - 1129508 - | tRNA 2'-O-methylase TVN1072 1131027 - 1130521 - | hypothetical protein TERM 549 1131042 - 1131069 + r 79 -4.3 -5.31091 | TAATATTTGGGATAT GTTAAAAAAAG ATTTAA CCTTTTTTAAC TTTTATTTTGTTCTC TVN1073 1131532 - 1131371 - | hypothetical protein TVN1074 1131795 - 1132799 + | methyltransferase TVN1075 1133276 - 1133061 - | small nuclear ribonucleoprotein (snRNP)-like protein TVN1076 1133450 - 1133289 - | hypothetical protein TVN1077 1134075 - 1133467 - | exosome complex RNA-binding protein Csl4 TERM 550 1133970 - 1133986 + g 91 -3.6 -5.8187 | overlap 1133958 TCTGGCCAAATTTTA CGGCTA TGATT TCGCCG TTTTTTTCTTCCGTA TERM 551 1134100 - 1134112 + H 73 -9.1 -2.89191 | TTTGTATTAGTTTTA GCCAG GTA CTGGC TATATCCACATATAA TERM 552 1135071 - 1135096 + G 79 -7.7 -4.31459 | gap 1, overlap 1135068 AGGTTTAGATATGTT CCTGTTG-TGAC AGC GTCAGCAATAGG TTCTTTCTTCCTTTT TVN1078 1134366 - 1135520 + | major facilitator superfamily permease TVN1079 1136722 - 1135544 - | succinyl-diaminopimelate desuccinylase TVN1080 1136823 - 1137407 + | hypothetical protein TERM 553 1138535 - 1138521 - g 76 -2.8 -5.27477 | AGCTGAAGGAAAAAA CAGTTA CAT TAGCTG CAAGAAATATAAGAG TVN1081 1137473 - 1138861 + | prolyl-tRNA synthetase TVN1082 1138861 - 1139499 + | phosphoserine phosphatase tfb 1140823 - 1139885 - | transcription initiation factor IIB TVN1084 1141039 - 1140833 - | H/ACA RNA-protein complex component Gar1 TVN1085 1141285 - 1142262 + | GTPase gltX 1142243 - 1143889 + | glutamyl-tRNA synthetase TVN1087 1144144 - 1143890 - | hypothetical protein TVN1088 1144756 - 1144148 - | GMP synthase subunit A tfb 1145694 - 1144753 - | transcription initiation factor IIB aspC 1146079 - 1147365 + | aspartyl-tRNA synthetase TERM 554 1147830 - 1147819 - g 75 -3 -5.2422 | AAGGATATGAAAAAA TTTC CAAT GAAA AGGTTAAAAAAGAAA TERM 555 1147982 - 1147970 - g 71 -4.8 -4.70659 | CGTCACATCTAAAAA CGAC GAAAT GTCG GATTGTGATCTTATA TVN1091 1147653 - 1148597 + | 3-hydroxyacyl-CoA dehydrogenase TVN1092 1148889 - 1148602 - | hypothetical protein TERM 556 1149001 - 1148986 - R 77 -9 -3.67285 | ATAACATATTGGAAA GGCTCT TGCA AGAGCC AGACATGCATATGTA TVN1093 1149465 - 1149034 - | transcription factor TVN1094 1149537 - 1150205 + | fibrillarin TVN1095 1150252 - 1150731 + | 6-pyruvoyl-tetrahydropterin synthase TVN1096 1150733 - 1151458 + | ATPase TERM 557 1151709 - 1151698 - T 80 -7.2 -4.49041 | opp_overlap 1151697 ATATAAAAAATTAAA CCCC TACT GGGG ATGCTTCTTCAACCA TVN1097 1152678 - 1151701 - | malate dehydrogenase TERM 558 1152865 - 1152851 - H 76 -2.9 -5.4433 | opp_overlap 1152851 AGAGAGAAACAAAAA GTTTT AATAG AAAAC TTTAACCATTCGTAA TVN1098 1152945 - 1154372 + | ATPase TVN1099 1154986 - 1154375 - | putative peroxiredoxin TVN1100 1156029 - 1155064 - | delta-aminolevulinic acid dehydratase TVN1101 1156112 - 1156444 + | hypothetical protein TVN1102 1156693 - 1156448 - | hypothetical protein TVN1103 1157022 - 1156690 - | hypothetical protein TVN1104 1158468 - 1157047 - | NADH dehydrogenase subunit N TVN1105 1160015 - 1158465 - | NADH dehydrogenase subunit M TERM 559 1159653 - 1159641 - G 78 -5.5 -4.91459 | GAATATGTAGAAAAA GAGGA AAT CCCTC GATATAAGTAAACCT TVN1106 1161072 - 1160017 - | NADH:ubiquinone oxidoreductase subunit 5 (chain L) TVN1107 1162015 - 1161017 - | NADH:ubiquinone oxidoreductase subunit 5 (chain L) TERM 560 1161592 - 1161575 - GR 77 -8.5 -3.65135 | CTTAAAGAACCAGAA TCCTATC AGGA GATAGGA ACAAAGACCTACCAA TERM 561 1161926 - 1161911 - GR 74 -6.8 -4.36378 | overlap 1161908 CAAAAATATAAAGAA TGAGGC AACT GCCCCA GACCACTTCCTATAG TVN1108 1162329 - 1162018 - | NADH dehydrogenase subunit K TVN1109 1162548 - 1162330 - | NADH dehydrogenase subunit J TVN1110 1162789 - 1162541 - | NADH dehydrogenase subunit J TVN1111 1163250 - 1162786 - | NADH dehydrogenase subunit I TERM 562 1163172 - 1163192 + gr 79 -5.4 -5.04356 | opp_overlap 1163163 1163175, overlap 1163175 TAAACATGCCCTGAA GCATCCCA ACAAA TGGGATTC TTTTTGGTTCTTTAA TERM 563 1163175 - 1163189 + gr 73 -5.7 -4.57543 | opp_overlap 1163175, overlap 1163172 ACATGCCCTGAAGCA TCCCA ACAAA TGGGA TTCTTTTTGGTTCTT TVN1112 1164254 - 1163214 - | NADH dehydrogenase subunit H TVN1113 1165354 - 1164251 - | NADH dehydrogenase subunit D TERM 564 1164420 - 1164444 + g 84 -10.8 -3.68341 | gap 1, opp_overlap 1164419 1164418 CCAACAATATACACC CCGAACTCGCC TTTC GGCGA-TTCGG TTCTTGCATAAACTT TVN1114 1165809 - 1165354 - | NADH dehydrogenase subunit C TVN1115 1166282 - 1165809 - | NADH dehydrogenase subunit B TVN1116 1166725 - 1166270 - | NADH dehydrogenase subunit A TERM 565 1166536 - 1166557 + g 84 -2.9 -5.60864 | TTTGATCTTCACCGG GCGGGGTAT CCTC ATACGCAGC TTTTTTTAGTATATC TVN1117 1168747 - 1166951 - | glutamyl-tRNA(Gln) amidotransferase subunit E TVN1118 1169964 - 1168744 - | glutamyl-tRNA(Gln) amidotransferase subunit D TERM 566 1169227 - 1169200 - G 78 -5.6 -4.87786 | overlap 1169201 GTAATCTGAGAAAAA CCTTACTGAGGA TGTG TACTCAGCAAGA TGGACGGTATCTATA TVN1119 1170047 - 1170820 + | hypothetical protein TVN1120 1171952 - 1170798 - | Acyl-CoA dehydrogenase TVN1121 1173228 - 1172230 - | DNA primase small subunit TERM 567 1173640 - 1173662 + G 95 -12.8 -3.22475 | overlap 1173645 TCTATGCTACGCCGC TACAGCAGGG CAA CCCTGTTGTA TATTATCCAGCTCAG TERM 568 1173645 - 1173657 + G 75 -9.1 -3.72788 | overlap 1173640 GCTACGCCGCTACAG CAGGG CAA CCCTG TTGTATATTATCCAG TVN1122 1173264 - 1176557 + | serine protease TVN1123 1177588 - 1176554 - | methionine synthase TERM 569 1176683 - 1176697 + g 70 -3.6 -4.85918 | TTCTGGATCCTTTAT TATGTT GAG AACGTA TTTTATTCTATCCTC TVN1124 1178471 - 1177590 - | hypothetical protein TERM 570 1178502 - 1178530 + r 86 -10.3 -3.64466 | TGATCCAAGTATGTC TGCTGCTATGTCG TTA TGACCTAGCGGCA TTATATGTATACCAT TVN1125 1179272 - 1178481 - | 5,10-methylenetetrahydrofolate reductase TVN1126 1179340 - 1179765 + | hypothetical protein TVN1127 1180156 - 1179749 - | transcription regulator TVN1128 1180337 - 1181974 + | chaperonin GroEL TVN1129 1182043 - 1183005 + | thioredoxin reductase TERM 571 1183933 - 1183915 - g 86 -10.2 -3.83026 | opp_overlap 1183913 CGGTTGGAGATGAAA GCGGGTCC AGA GGAGCCGC AATCGTTGCCGAGAC TVN1130 1183365 - 1184036 + | threonine dehydratase TVN1131 1184142 - 1184459 + | hypothetical protein TERM 572 1185532 - 1185570 + G 75 -2.4 -5.28983 | gap 1 CGATACAAAGTGATA GGATCTCCGCA-ATATG TATTTC CAGTTCTGCGGTGATCC TTTTTATATTTTCAA TVN1132 1184913 - 1185779 + | protoheme IX farnesyltransferase TVN1133 1185824 - 1186360 + | hypothetical protein TVN1134 1186695 - 1187063 + | 50S ribosomal protein L18e TERM 573 1187289 - 1187268 - g 79 -6.6 -4.69664 | CATATTACCCAAAAA CTCCTGAA AATATA CTCAGGAG ATCCATAGGTGATAT rpl13p 1187069 - 1187479 + | 50S ribosomal protein L13P rps9p 1187481 - 1187879 + | 30S ribosomal protein S9P TVN1137 1187885 - 1188103 + | DNA-directed RNA polymerase subunit N TVN1138 1189091 - 1190485 + | hypothetical protein TVN1139 1191334 - 1190495 - | pyrroline-5-carboxylate reductase TERM 574 1191121 - 1191138 + g 75 -5.5 -4.79352 | opp_overlap 1191121 TTAAGAATACAACAT CTGCCTC CTTC GACGCAG TTTTGTTATCACTCA TVN1140 1191875 - 1191381 - | hypothetical protein TVN1141 1193625 - 1192129 - | glycerol kinase TVN1142 1193765 - 1194688 + | hypothetical protein TVN1143 1194876 - 1196198 + | sugar-binding protein TERM 575 1196288 - 1196269 - g 84 -3.5 -5.51078 | AAAAGAAAAATAAAA GCCCG GAAAAGATGA CGGGC ATACTATTTATAATC TVN1144 1196202 - 1197131 + | ABC-type sugar transporter, permease component TVN1145 1197134 - 1198021 + | sugar permease TVN1146 1198028 - 1199143 + | ABC-type sugar transporter, ATPase component TERM 576 1200384 - 1200364 - gf 81 -9.7 -3.36991 | opp_overlap 1200362, overlap 1200362 CACTATGGGTAAAGA CGGTCGAGT TAT ACTCGAACG AATTAAATATTGCTA TERM 577 1200581 - 1200561 - gf 74 -4 -5.05116 | GTAGAAACAATAAAA CAACTTGC TGAGG GCAACTTG ACTCCGTGGGGGGTT TVN1147 1199109 - 1201040 + | glycogen debranching protein TERM 578 1202532 - 1202542 + G 86 -3.2 -5.62219 | ATGGGAAGACTGAAA TTGC GAG GCAG TTTTTTTACTCTCTT TVN1148 1201046 - 1202803 + | glycogen debranching protein TVN1149 1203845 - 1202787 - | transcription regulator TERM 579 1204886 - 1204898 + G 74 -7.7 -4.0162 | GGTCCAAATGGATGC CAACG ATC CGTTG TTTATACTCTACACG TERM 580 1205577 - 1205590 + G 73 -5.3 -4.63542 | opp_overlap 1205577 AATGACGATGAGAGA TACGT GAAG ACGTA TTTTTCCAAGTTCTA TVN1150 1204140 - 1206092 + | Acyl-coenzyme A synthetase TVN1151 1206089 - 1206700 + | hypothetical protein TVN1152 1207577 - 1206711 - | aldo/keto reductase TERM 581 1207247 - 1207263 + g 100 -12.3 -4.27467 | overlap 1207238 TATTTAGTCTTGAGA GGCTTGC TTT GCAAGCC TTTATTACCTTGTCG TVN1153 1208473 - 1207583 - | hypothetical protein TERM 582 1208281 - 1208271 - G 73 -8.2 -3.65351 | opp_overlap 1208271 1208269 1208264 GCAGTGCCACTGAAA GGCG GAT CGCC TGTTGGATTACTGAA TVN1154 1208887 - 1208678 - | hypothetical protein TVN1155 1209022 - 1210005 + | permease TVN1156 1210002 - 1210382 + | hypothetical protein TERM 583 1210688 - 1210669 - g 72 -7.2 -4.05004 | opp_overlap 1210669 1210670 CGATCAGAATAATAA TGGAAACA CTTC CGTTTCCA GCAATAATTGGCAGA TVN1157 1210440 - 1211894 + | putative oxidoreductase TVN1158 1212110 - 1213330 + | cofactor-independent phosphoglycerate mutase TVN1159 1213430 - 1213972 + | hypothetical protein TVN1160 1215350 - 1213986 - | proline/betaine transport permease TERM 584 1215350 - 1215371 + g 71 -8.8 -3.38068 | overlap 1215348 TTGTAGTATCAGCCA TTGCTACG TCAACT CGTAGCAA TATTAATATTTTTCT TVN1161 1216615 - 1215416 - | carnitine dehydratase TERM 585 1215754 - 1215773 + g 73 -3.5 -5.0538 | opp_overlap 1215760 GATATTGCTCTATTA CAGGAAC AAGTTC GTACCTG TTTTTTACCCTCAAC TVN1162 1217104 - 1216673 - | transcription regulator (SlyA-related) TVN1163 1218864 - 1217101 - | multidrug efflux permease TERM 586 1217306 - 1217288 - G 86 -10.4 -3.75115 | overlap 1217296 CCTGCATAAAATGAA TCATGAAG TGC CTTCATGA AAGCAGGTGCCAGAG TVN1164 1218962 - 1219474 + | hypothetical protein TVN1165 1219531 - 1219926 + | hypothetical protein TVN1166 1220490 - 1219960 - | secreted endonuclease distantly related to Holliday junction resolvase TVN1167 1220593 - 1221180 + | alpha/beta superfamily hydrolase TVN1168 1222441 - 1221182 - | hydroxymethylglutaryl-CoA reductase TVN1169 1223699 - 1222485 - | multidrug efflux permease TVN1170 1223864 - 1224769 + | dihydroorotate dehydrogenase 1B TVN1171 1224766 - 1225518 + | dihydroorotate dehydrogenase electron transfer subunit TERM 587 1227790 - 1227802 + GT 73 -7.7 -3.75629 | opp_overlap 1227789 1227790 GCTTCATTCCACAAG GCAGT TAT ACTGC TTTCAATTGGAGATC TVN1173 1228927 - 1228061 - | hypothetical protein TVN1172 1225570 - 1228122 + | TPR repeat-containing protein TVN1174 1229292 - 1228987 - | hypothetical protein TERM 588 1229996 - 1229984 - H 95 -6.3 -5.9003 | overlap 1229991 AAATCAACAAAAAAA TTGAC AAC GTCAA ATTAGCAAAAAAATT TVN1175 1230030 - 1231223 + | Acyl-CoA dehydrogenase TVN1176 1231330 - 1231911 + | putative RNA-processing protein TVN1177 1232784 - 1232029 - | serine/threonine protein kinase TERM 589 1232636 - 1232616 - G 76 -7.6 -4.1899 | TGACTGCACGGAAAA CTACAGAC TCCTT GCCTGTAG ATATTGGAAAATCGA TVN1178 1233183 - 1232812 - | translation initiation factor IF-1A TERM 590 1232976 - 1232992 + g 74 -6.5 -4.42974 | overlap 1232978 TTCTCTTCCTCATCC TACCAGG GAT CCTGGCA TTTCTTGTATATCCG nusA 1233689 - 1233261 - | transcription elongation factor NusA-like protein TVN1180 1235240 - 1233699 - | DNA-directed RNA polymerase subunit A'' TERM 591 1234221 - 1234247 + g 93 -11 -4.1552 | TTTAATCGGGAGTGC CTTTATCTGCTC CTG GAGCAAATAAAG TTTCTTAAACGACTC TVN1181 1237897 - 1235237 - | DNA-directed RNA polymerase subunit alpha TERM 592 1235836 - 1235855 + g 73 -7.2 -4.07877 | GTTGAAGCTCGCCAC GCTTGTAG GTTT CTATAAGC TTATTTATACGATCC TVN1182 1241481 - 1237894 - | DNA-directed RNA polymerase subunit beta TERM 593 1241186 - 1241202 + g 70 -3.7 -4.88405 | GGCGTTATCTGGTTC GAAGC GCCGGAA GCTTC TTTTATTTCAGGCTT rpoH 1241741 - 1241478 - | DNA-directed RNA polymerase subunit H TERM 594 1241518 - 1241541 + g 71 -9.6 -2.98453 | opp_overlap 1241518, overlap 1241517 1241523 ACGCGATAGTAAACA GAATGGCCCA TTGT TGGGCTGTTC CTTATTATCTTAATA TERM 595 1241821 - 1241803 - R 71 -6.7 -4.08945 | opp_overlap 1241792 ACCACCTGGTTAAAA GCCAGAT GCTCT ACCTGGC TGAGCTACGGGCCCA TVN1184 1242715 - 1241900 - | hypothetical protein TVN1185 1243788 - 1242712 - | replication factor A TVN1186 1243935 - 1244633 + | transcription regulator TERM 596 1244655 - 1244678 + T 73 -9 -3.17941 | opp_overlap 1244661, overlap 1244661 1244675 CTTAAATTCGGCTTT GTCAAATATC CATC GATATTTGGC TTCCTGCCATCTGCT TVN1187 1245837 - 1244656 - | transposase TVN1188 1246180 - 1245857 - | transcription regulator TVN1189 1246974 - 1246465 - | inorganic pyrophosphatase TVN1190 1247804 - 1247214 - | ATP:corrinoid adenosyltransferase TVN1191 1247883 - 1248551 + | ribosome biogenesis protein TVN1192 1249051 - 1248764 - | hypothetical protein TVN1193 1249542 - 1249252 - | hypothetical protein TVN1194 1251221 - 1250055 - | galactonate dehydratase TVN1195 1252494 - 1253183 + | serine/threonine protein phosphatase TVN1196 1253697 - 1254131 + | transcription regulator TVN1197 1257431 - 1255890 - | benzoylformate decarboxylase TVN1198 1258361 - 1257432 - | 2-hydroxyacid dehydrogenase TVN1199 1258483 - 1258953 + | hypothetical protein TERM 597 1261139 - 1261127 - g 70 -7.7 -3.67134 | AAATTACTTCAATAA TCCTG TTA CAGGA CAAAAAAGAAATGAA TVN1200 1258977 - 1261565 + | penicillin amidase related protein TERM 598 1261795 - 1261812 + G 70 -7.7 -3.73953 | overlap 1261797 TTTTGATTCTATTGC TGGCCTG CCTT CAGGCTA TTTACTGCCCCTCGT TVN1201 1261595 - 1261930 + | hypothetical protein TVN1202 1262670 - 1262323 - | hypothetical protein TVN1203 1263221 - 1262718 - | hypothetical protein TVN1204 1263637 - 1265169 + | TPR repeat-containing protein TVN1205 1265213 - 1266004 + | hypothetical protein TVN1206 1266214 - 1267449 + | NAD(FAD)-dependent dehydrogenase TVN1207 1267452 - 1267742 + | hypothetical protein rps15p 1267907 - 1268344 + | 30S ribosomal protein S15P TVN1209 1268341 - 1269687 + | single-stranded DNA-specific exonuclease TVN1210 1269764 - 1270423 + | hypothetical protein TVN1211 1271207 - 1270428 - | hypothetical protein TVN1212 1277434 - 1271204 - | hypothetical protein TERM 599 1276291 - 1276312 + g 72 -10.1 -2.84634 | opp_overlap 1276283 1276302 TTATATATTCGCCCA GCGGAAGAG GAGC CGCTTCCGC TATAGTCGTATAAAC TVN1213 1277788 - 1278162 + | prefoldin subunit beta TVN1214 1278159 - 1279013 + | GTP cyclohydrolase TVN1215 1279474 - 1279046 - | cytidylyltransferase TVN1216 1279532 - 1279984 + | acetyltransferase TVN1217 1280038 - 1280493 + | HIT (histidine triad) family protein TVN1218 1280648 - 1281244 + | orotate phosphoribosyltransferase TERM 600 1281678 - 1281657 - g 73 -3.7 -5.00884 | overlap 1281661 ATTTCCTCTAAAAAA TATACCATC ACCG GATGGCGTA GGAGTTTATTCTGAT lysK 1281403 - 1282914 + | lysyl-tRNA synthetase TERM 601 1283188 - 1283173 - g 80 -6.1 -4.85599 | GTGAGGGCAGAAAAA GAGGG GAAAAG CCCTC AGGAGATCGCCGATA TERM 602 1283360 - 1283344 - g 73 -2.9 -5.0916 | GGTGTAATAGAAAAA GGAACAA TGA TAGCTCC GTACTGCAGAAAAAT TERM 603 1283623 - 1283606 - g 70 -3.5 -4.77757 | gap 1, opp_overlap 1283606, overlap 1283609 1283622 GGCTAAAAACGAAAA CATTCTGG AAG CCA-AATG TATTGGCATACACAA TVN1220 1282981 - 1284612 + | methionyl-tRNA synthetase TVN1221 1284768 - 1285073 + | cationic amino acid transporter TVN1222 1286428 - 1285178 - | transposase TERM 604 1285662 - 1285675 + g 75 -5.3 -4.90381 | TTGACTTTCCTGTTT CTCTT CATG AAGAG TTTTCTTATCTTCAC TVN1223 1286996 - 1286418 - | site-specific integrase-resolvase TERM 605 1286848 - 1286860 + g 72 -6.3 -4.39828 | opp_overlap 1286848, overlap 1286841 1286840 GTTTTTCTCTTAACA TCCTT GTT AAGGA TTTTATAAACGTCTT TVN1224 1287157 - 1288110 + | amino acid transporter rpoK 1288298 - 1288113 - | DNA-directed RNA polymerase subunit K TVN1226 1288803 - 1288366 - | hypothetical protein egsA 1289884 - 1288826 - | NAD(P)-dependent glycerol-1-phosphate dehydrogenase TERM 606 1289064 - 1289050 - G 76 -10 -3.25522 | overlap 1289048 1289046 1289044 GGAGATAAAGAGAGA CGATGG TTC CCATCG CACACATCTCTCCGT TERM 607 1289638 - 1289654 + g 74 -6.6 -4.3534 | CATCATTCGTCTCTT CCTCAA TTTTC TTGAGG TTTTCATAATTAGCC TVN1228 1290846 - 1289977 - | dihydrodipicolinate synthetase TVN1229 1291850 - 1290876 - | hypothetical protein TVN1230 1291978 - 1292892 + | ribonuclease Z TVN1231 1293305 - 1292898 - | hypothetical protein TERM 608 1292948 - 1292930 - G 71 -8.8 -3.31144 | opp_overlap 1292932 CTTTTATTCGTACAA GAGCGTGC GTC GCACCCTC TCTAAAGTGGTTGAA TERM 609 1294190 - 1294215 + G 78 -7.5 -4.57341 | opp_overlap 1294190 1294188 1294191 1294193, overlap 1294191 GGAGACATCATAACA TCAGGCACACC CGCC GGTGTGGCTGC TTTTTCAGAAAAGTT TERM 610 1294214 - 1294191 - g 76 -11 -2.58783 | opp_overlap 1294190 1294191, overlap 1294190 1294188 1294193 GAGACATCATAACAT CAGGCACACC CGCC GGTGTGGCTG CTTTTTCAGAAAAGT TERM 611 1294191 - 1294214 + G 81 -11 -3.33922 | opp_overlap 1294191 1294190 1294188 1294193, overlap 1294190 GAGACATCATAACAT CAGGCACACC CGCC GGTGTGGCTG CTTTTTCAGAAAAGT TVN1232 1293497 - 1294303 + | 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase TVN1233 1296393 - 1294312 - | Acyl-CoA synthetase (NDP forming) TERM 612 1294913 - 1294925 + g 74 -4.9 -4.77079 | TTTACGTTTATCCCA TATTC AGA GAATA TTTTCTTGCTCTCTA TERM 613 1296060 - 1296072 + g 74 -6.3 -4.53349 | AGGTATTAGCGAGTT GATCT TCA AGATC TTTATTTCCTACTTC TVN1234 1297321 - 1296716 - | hypothetical protein TVN1235 1297667 - 1298026 + | small primase-like protein TERM 614 1298148 - 1298129 - g 74 -10 -3.19472 | opp_overlap 1298128 AAATAAAGGATCTAA CACCCTCC TCAC GGAGAGTG AATGTTTTAGGAAAA TVN1236 1298098 - 1298535 + | single-strand DNA-binding protein TVN1237 1300303 - 1298537 - | ATP-dependent DNA ligase TERM 615 1299986 - 1300001 + g 88 -3.2 -5.81412 | GGTTAAATCCTCATT CACGAG AGAT CTCATG TTTTTTTTCGCTGCA TVN1238 1302039 - 1300339 - | amino acid transporter TERM 616 1301616 - 1301606 - G 73 -5.4 -4.66318 | AGCATCGCAAGAAAA GTTC CTA GAAC ACTCATAACACCAGT TERM 617 1302193 - 1302183 - H 79 -5.4 -5.13473 | ATCACACGGAAAAAA TGCT AAT AGCA AGGTGAATCATGTAT TVN1239 1302262 - 1304136 + | aldehyde:ferredoxin oxidoreductase TERM 618 1304144 - 1304120 - T 82 -11.5 -2.55074 | opp_overlap 1304122, overlap 1304110 TTGAACCTGAACTTA TAGCGGGGTTA TAT TAACCCTGCTA TTAGGACACAAAAGT TERM 619 1304122 - 1304142 + T 85 -11.9 -3.01712 | opp_overlap 1304120 1304110 GAACCTGAACTTATA GCGGGGTTA TAT TAACCCTGC TATTAGGACACAAAA TVN1240 1306205 - 1304145 - | cation transport ATPase TVN1241 1306291 - 1306428 + | hypothetical protein TVN1242 1306495 - 1306680 + | metal-binding protein TVN1243 1307855 - 1306677 - | nicotinate phosphoribosyltransferase cysS 1309276 - 1307912 - | cysteinyl-tRNA synthetase TVN1245 1310729 - 1309485 - | major facilitator superfamily permease TERM 620 1311046 - 1311031 - g 74 -7.6 -4.02051 | GAGGAATTTAAATAA GATCGA CCTG TCGATC ACCGAGTTCACCATA TVN1246 1310918 - 1311382 + | transcription regulator (SlyA-related) TVN1247 1312452 - 1311805 - | 30S ribosomal protein S3Ae TERM 621 1312530 - 1312553 + r 70 -8.2 -3.18239 | opp_overlap 1312536, overlap 1312529 TCGTATGGGAGCTTT GCCAAATGTC ATTT GACATTTGAC TTCCTGCCATCTGTC TERM 622 1312742 - 1312761 + r 71 -8.6 -3.00923 | opp_overlap 1312751 ACCTATCATTACGTA TGGGAACT ATGA GGTTCCCA TCTATGATCTTAAAG TVN1248 1313502 - 1313266 - | transcription regulator TVN1249 1313926 - 1313513 - | hypothetical protein TERM 623 1314208 - 1314220 + G 70 -7.7 -3.73224 | overlap 1314198 GAATGGGCACAGCTC TAGGC GCT GCCTA TTTCCTCGCGCATGG TVN1250 1314147 - 1314728 + | hypothetical protein TVN1251 1315115 - 1314741 - | transcription regulator TVN1252 1315211 - 1316233 + | translation initiation factor IF-2B subunit alpha TVN1253 1317493 - 1316213 - | tryptophanyl-tRNA synthetase TVN1254 1317774 - 1319114 + | trehalose-6-phosphate synthase TVN1255 1319080 - 1319820 + | trehalose-6-phosphatase TVN1256 1319865 - 1320830 + | hypothetical protein TVN1257 1321650 - 1320838 - | amidohydrolase TVN1258 1322512 - 1322048 - | NTP pyrophosphohydrolase (mutT-related oxidative damage repair enzyme) TVN1259 1323006 - 1322512 - | nucleic-acid-binding protein TVN1260 1324265 - 1323003 - | acetyl-CoA acetyltransferase TVN1261 1324987 - 1324343 - | aspartokinase beta subunit TERM 624 1324700 - 1324730 + g 77 -8.4 -4.06903 | opp_overlap 1324688, overlap 1324702 1324709 AGATTGCCTCTCGGC TAGCGAAAGTATGA GCT TCATGTTTTCGCTC TTTGGTTTAAGAATT TERM 625 1324702 - 1324728 + g 84 -11 -3.62354 | overlap 1324700 1324709 ATTGCCTCTCGGCTA GCGAAAGTATGA GCT TCATGTTTTCGC TCTTTGGTTTAAGAA TERM 626 1324842 - 1324860 + g 70 -5.3 -4.47259 | overlap 1324833 1324832 TATCTTTTCAGGGCC GCTTCTA CGGCC TGGAAGC TTTTGATGTTGTACT TVN1262 1325117 - 1326649 + | amino acid transporter TVN1263 1327868 - 1326678 - | multidrug efflux permease TVN1264 1328544 - 1327879 - | hypothetical protein TVN1265 1328930 - 1328580 - | transcription regulator TVN1266 1330911 - 1328971 - | Acyl-coenzyme A synthetase TVN1267 1331393 - 1330971 - | hypothetical protein TVN1268 1333358 - 1331499 - | Acyl-coenzyme A synthetase TERM 627 1332953 - 1332940 - G 74 -6.7 -4.27316 | CTCTTTAAGTTAAAA GGCAT GTAG ATGCC AACCCTATCGCCTTT TVN1269 1334554 - 1333406 - | isovaleryl-CoA dehydrogenase TVN1270 1335184 - 1334636 - | molybdopterin-guanine dinucleotide biosynthesis protein TVN1271 1336408 - 1335287 - | saccharopine dehydrogenase TERM 628 1335708 - 1335720 + g 72 -6.3 -4.37886 | TTTTCTGCATGCCCG CTGTA TCG TACAG TTTTCTCCCACATGC TVN1272 1336812 - 1336486 - | transcription regulator TVN1273 1337515 - 1336820 - | endonuclease III-like protein TVN1274 1338747 - 1337512 - | translation initiation factor IF-2 subunit gamma TERM 629 1337871 - 1337892 + g 74 -6.5 -4.52047 | gap 1, opp_overlap 1337874, overlap 1337874 1337875 GATCTAATTTTGTAC CAACGGCGGC AAG GCCGCC-TGG TTTTATCATATCATA TERM 630 1337890 - 1337874 - G 72 -9.3 -3.15579 | opp_overlap 1337871 1337874 1337875 CTAATTTTGTACCAA CGGCGGC AAG GCCGCCT GGTTTTATCATATCA TERM 631 1337874 - 1337891 + g 71 -9.1 -3.30505 | gap 1, opp_overlap 1337874, overlap 1337871 1337875 CTAATTTTGTACCAA C-GGCGGC AAG GCCGCCTG GTTTTATCATATCAT TERM 632 1337875 - 1337889 + g 95 -12.8 -3.21099 | opp_overlap 1337874, overlap 1337874 1337871 TAATTTTGTACCAAC GGCGGC AAG GCCGCC TGGTTTTATCATATC TVN1275 1339117 - 1338731 - | 30S ribosomal protein S6e TERM 633 1339803 - 1339775 - g 71 -9.7 -2.64274 | opp_overlap 1339775 1339778, overlap 1339772 1339771 1339778 AGGCCCTGAAATTGA GAAGCTTGCAA AGGACGG TCGCAAGCTTC TTACTCTACCCTACT TERM 634 1340241 - 1340231 - g 85 -4 -5.53288 | GGTAATTGAAAAAAA TGTA AAA TACA GGGATGCCGGTGCTG TVN1276 1339245 - 1340828 + | O-sialoglycoprotein endopeptidase/protein kinase TVN1277 1340821 - 1341378 + | xanthosine triphosphate pyrophosphatase-like protein TERM 635 1341890 - 1341879 - g 71 -4.4 -4.78237 | TACGTTACAAGAAAA GAAG TAGC CTTC CTCACGGAAAAATCC TVN1278 1341660 - 1342946 + | dehydrogenase (flavoprotein) TVN1279 1342957 - 1343229 + | ferredoxin-like protein TERM 636 1343402 - 1343392 - g 71 -6.8 -4.19307 | CAGATAAAGGATAAA GTGG GTG CCAC GATAACTGTAATATC TVN1280 1343254 - 1344033 + | electron transfer flavoprotein subunit beta TVN1281 1344030 - 1345079 + | electron transfer flavoprotein subunit alpha thrS 1347049 - 1345067 - | threonyl-tRNA synthetase TVN1283 1348697 - 1347387 - | NAD-dependent aldehyde dehydrogenase TVN1284 1349995 - 1348694 - | alcohol dehydrogenase IV TVN1285 1350816 - 1350001 - | Zn-dependent hydrolase (AttM-related) TVN1286 1351854 - 1351159 - | hypothetical protein TVN1287 1352511 - 1351870 - | triosephosphate isomerase TVN1288 1353122 - 1352610 - | deoxycytidylate deaminase TVN1289 1353460 - 1353176 - | hypothetical protein TVN1290 1354918 - 1353500 - | hypothetical protein TERM 637 1354882 - 1354857 - G 72 -6.2 -4.29325 | opp_overlap 1354881, overlap 1354848 TAGGAATAGCCAAAA GCACCTGCAA AAACTA TTACAAGTGC TATGGCTACGCCAAG TERM 638 1354976 - 1354990 + r 75 -7.2 -4.11216 | opp_overlap 1354963, overlap 1354963 1354961 TATTTGCAAATTATG TGCAAA TCT TTTGCA TTTTGCGCATAGAAA hemH 1355933 - 1355049 - | phosphoribosylaminoimidazole-succinocarboxamide synthase hemE 1356017 - 1357015 + | uroporphyrinogen decarboxylase hemH 1357012 - 1357926 + | ferrochelatase TERM 639 1358645 - 1358683 + G 73 -10.4 -2.54919 | opp_overlap 1358649, overlap 1358644 1358647 1358659 GGCATACTCATAGCA TATAGTCTTCACGACAGC ACA GCTGTTGTGATGATGATA GTATTCTCCATAGCT TVN1294 1358012 - 1358959 + | dolichol kinase TVN1295 1359370 - 1359071 - | hypothetical protein TVN1296 1359732 - 1359439 - | hypothetical protein TVN1297 1360214 - 1359744 - | phosphoribosylcarboxyaminoimidazole carboxylase catalytic subunit TVN1298 1361325 - 1360240 - | translation factor (SUA5-related) TERM 640 1361796 - 1361810 + G 76 -10 -3.254 | overlap 1361794 CCTGTATTGATCATC CTGCCT ACA AGGCAG TCTTCTCAATAACTC TVN1299 1361435 - 1363786 + | aminopeptidase N TVN1300 1365323 - 1363800 - | Na+/panthothenate symporter permease TVN1301 1365520 - 1365320 - | hypothetical protein TVN1302 1367885 - 1365594 - | Alpha-glucosidase TERM 641 1366307 - 1366292 - G 71 -3.2 -5.06103 | opp_overlap 1366292, overlap 1366294 ATAACGGGTAAAAAA TCGCTG ACTG CAGCCA TCTAATAAATAGTTC TVN1303 1369187 - 1368057 - | RNA helicase TVN1304 1369451 - 1370641 + | acetyl-CoA acetyltransferase TERM 642 1371382 - 1371364 - g 74 -10.2 -2.57211 | overlap 1371363 ATGTTGCTGCACAAG CTCTCGGC ATC GCCGAGGG AATACTCGAAAGAAC TVN1305 1370643 - 1371752 + | Acyl-CoA dehydrogenase TVN1306 1371752 - 1372228 + | Acyl-CoA dehydrogenase TVN1307 1372249 - 1372758 + | Acyl-CoA dehydrogenase TVN1308 1373563 - 1373162 - | hypothetical protein TERM 643 1374513 - 1374501 - g 74 -4.9 -4.78237 | overlap 1374504 TATCGCACAAGAAAA TATCA CGG TGATA GCCATGGTACCTTCG TVN1309 1373719 - 1375308 + | acyl-CoA synthetase TVN1310 1377289 - 1375310 - | 3-hydroxyacyl-CoA dehydrogenase TVN1311 1377622 - 1377296 - | sterol carrier protein TVN1312 1378260 - 1377730 - | CBS domain-containing protein TVN1313 1378444 - 1380120 + | Fe-S oxidoreductase TVN1314 1380154 - 1381158 + | oxidoreductase TVN1315 1383032 - 1381191 - | hypothetical protein TERM 644 1382675 - 1382694 + g 81 -10.8 -3.24924 | overlap 1382674 CAAATCTGTGAACCT CGGGAAAA CTTA TTTTCCCG TATTCTGAATCCGGC aroB 1383228 - 1384310 + | 3-dehydroquinate synthase aroE 1384297 - 1385100 + | shikimate 5-dehydrogenase TVN1318 1385087 - 1385893 + | shikimate kinase TERM 645 1386559 - 1386569 + G 82 -4.6 -5.32882 | TTGAACCAGATTATT CGTC GAT GGCG TTTTTTATGGTGCTA TVN1319 1385883 - 1387115 + | 3-phosphoshikimate 1-carboxyvinyltransferase argS 1387144 - 1388781 + | arginyl-tRNA synthetase TVN1321 1391662 - 1388786 - | hypothetical protein TVN1322 1393063 - 1391663 - | hypothetical protein TERM 646 1392140 - 1392154 + g 70 -2.8 -5.01732 | ATAAACTAATTCTGG TTCTAC ATC GAAGAA TTTTTTGAAGACCTT TERM 647 1392217 - 1392207 - G 70 -5.4 -4.42386 | TGCCTATTTACAAAA GCAA AAT TTGC TGCAGACTTCATGGC TVN1323 1393485 - 1393808 + | hypothetical protein TVN1324 1393839 - 1394372 + | acetyltransferase TVN1325 1394708 - 1394373 - | hypothetical protein TVN1326 1395016 - 1395957 + | Fe-S oxidoreductase TVN1327 1396322 - 1395987 - | hypothetical protein TVN1328 1397733 - 1396300 - | ABC-type peptide transporter, ATPase component TVN1329 1399301 - 1397733 - | ABC-type peptide transport system, ATPase component TERM 648 1397803 - 1397779 - G 70 -3.6 -4.78848 | opp_overlap 1397781, overlap 1397781 TCTTCAAATAGAAAA CAGGCAAC CTTGTGACC GTTGCCTA TGTCTATTAGCTTAG TERM 649 1398903 - 1398913 + g 71 -4 -4.88918 | GGATGGTTCTTGGAA TATC ATC GATA TTTTGTTTCCCCTGA TVN1330 1400263 - 1399304 - | ABC-type peptide transporter, permease component TVN1331 1401364 - 1400273 - | ABC-type peptide transport system, permease component TERM 650 1401406 - 1401392 - R 74 -5.8 -4.49344 | AAATTTACTATAAAA GAATTT TGC AAATTC AGACCAATAGAATTC TVN1332 1404382 - 1401500 - | ABC-type peptide transport system, solute-binding component TVN1333 1404760 - 1405254 + | hypothetical protein TVN1334 1406112 - 1405258 - | 2-oxoacid ferredoxin oxidoreductase subunit beta TERM 651 1406057 - 1406078 + g 86 -5.8 -5.3658 | AAATTTCCGCATCCT GGGCACCA GTCAGG TGGTACCC TTTTGTTTTTATAAT TVN1335 1407869 - 1406112 - | 2-oxoacid--ferredoxin oxidoreductase, alpha subunit TERM 652 1407867 - 1407879 + g 74 -4.1 -4.93661 | AACTTCATTTTGTTT CATGA TGC TCGTG TTTTGTTATTACTGT TERM 653 1408022 - 1407994 - H 73 -7.7 -3.84961 | TATCTAAGCATTAAA TTATTTTATCTCG ATG CAAAATAAAATAA TCAAAAATTTATAGA TERM 654 1408225 - 1408206 - g 93 -4.2 -5.76633 | GCACAGATAAAAAAA GCAGCAGC CATG GCTAATGC GGAAGCTGGTGCACT aspA 1408056 - 1409429 + | aspartate ammonia-lyase TERM 655 1409437 - 1409411 - T 79 -10.3 -2.85124 | gap 1, overlap 1409410 1409426 GAAAATTATGGAAAG TGGAGTCC-CAA AGGA TTGAGGACTCCA TCAAATCTATATTCC TVN1337 1409977 - 1409444 - | transcription regulator TVN1338 1410138 - 1411343 + | 2-methylthioadenine synthetase TVN1339 1412327 - 1411317 - | diphthamide synthase subunit DPH2 TVN1340 1413137 - 1412448 - | hypothetical protein TERM 656 1412952 - 1412940 - G 72 -7.7 -3.85817 | ATTCGGTTTTATAAA TACGG CAA CCGTA GAAAGTATAGTAACG TVN1341 1413744 - 1413232 - | hypothetical protein TVN1342 1415270 - 1413828 - | sugar transport permease TERM 657 1414611 - 1414629 + g 72 -7.4 -3.99228 | opp_overlap 1414615 TAATCCGAGTTTCTT GAAAGCCT CTG AGGCTTCC TTGTATTTTCCGTTG TVN1343 1416517 - 1415417 - | Acyl-CoA dehydrogenase TERM 658 1416910 - 1416895 - g 72 -6.2 -4.28589 | AAAAACTAGGGAAAA TTGACA TACT TGTCAA TAACTCCGGCATATG fabG 1416654 - 1417421 + | 3-ketoacyl-(acyl-carrier-protein) reductase TERM 659 1418095 - 1418106 + G 85 -5.8 -5.0925 | opp_overlap 1418095 CAGCAGGCGAAGATA CTGC GGAA GCAG TTTTTAATTTTGAAA TERM 660 1418284 - 1418266 - g 76 -6.6 -4.44608 | opp_overlap 1418265, overlap 1418263 CTGATCGAAAAAGAA GGACTGCC TAC GGCGATCC AGTTGTGAACGGCAA TVN1345 1417485 - 1418453 + | dehydrogenase TVN1346 1419530 - 1418445 - | N-acylamino acid racemase TVN1347 1419648 - 1419878 + | transcription regulator TVN1348 1420005 - 1420367 + | hypothetical protein TVN1349 1420446 - 1420982 + | chorismate mutase TVN1350 1420979 - 1421572 + | prephenate dehydrogenase TERM 661 1422113 - 1422094 - g 76 -2.9 -5.28176 | gap 1, overlap 1422095 1422097 GGTAGGCAGAAAAAA CCAGTTCT ATTGA AGAAC-GG AATGGGCAACACGCT TVN1351 1421569 - 1422507 + | 3-deoxy-7-phosphoheptulonate synthase TVN1352 1423547 - 1422495 - | pyruvate-formate lyase-activating enzyme TERM 662 1424429 - 1424441 + G 76 -7.7 -4.15396 | opp_overlap 1424429 1424426 1424425 ACAATTGAAAACGCA GTGAG ATC CTCAC TTCTTTCCTTTGAAG TERM 663 1424610 - 1424594 - g 95 -7.3 -5.42975 | TCAGATAAAGAAAAA GTGCAAG ACG CTTACAC ACTCAGGTGCATACC hutH 1423778 - 1425265 + | histidine ammonia-lyase TVN1354 1425606 - 1425262 - | hypothetical protein TVN1355 1427135 - 1425726 - | amino acid transporter TVN1356 1427251 - 1428912 + | urocanate hydratase TVN1357 1428909 - 1430123 + | imidazolonepropionase TVN1358 1431061 - 1430252 - | hypothetical protein TVN1359 1431663 - 1431058 - | hypothetical protein TERM 664 1431404 - 1431431 + g 76 -9.2 -3.42354 | overlap 1431408 TCGAAGCGTGGGTCA TCAGTAGCAGCA TAAA TGCTGCTCTTGA TTATCCCTTCACCTA TVN1360 1431896 - 1433041 + | metal-dependent amidohydrolase TVN1361 1433046 - 1433978 + | microcin C7 resistance protein MccF-like protein TVN1362 1434210 - 1433995 - | hypothetical protein TVN1363 1434738 - 1434253 - | major facilitator superfamily permease TVN1364 1435605 - 1434889 - | sugar transport permease TERM 665 1435646 - 1435658 + r 77 -4.9 -5.07567 | TAAATTTTTGTTTAT TCATA TTT TATGA TTTTTTAAGATATAG TVN1365 1436858 - 1435680 - | major facilitator superfamily permease TERM 666 1436044 - 1436018 - G 71 -6.6 -4.12188 | overlap 1436021 1436034 GGACGACGCTGAAAA CTATTATGGGCA CAA TGGCCATAAGAG CCTTCGCATGCCACA TERM 667 1436818 - 1436793 - G 70 -2.5 -4.9445 | opp_overlap 1436794, overlap 1436799 AGAATTAATGAAAAA TGAAAATGTGG AGGT CCACACGTTCC TTTGAGAGTAATTAC TERM 668 1436812 - 1436799 - G 82 -6.7 -4.81523 | opp_overlap 1436794, overlap 1436793 AATGAAAAATGAAAA TGTGG AGGT CCACA CGTTCCTTTGAGAGT TVN1366 1437000 - 1438442 + | multidrug efflux permease TVN1367 1438477 - 1439394 + | ABC-type multidrug transport system, ATPase component TVN1368 1439391 - 1440155 + | ABC transporter permease TVN1369 1440158 - 1440802 + | phosphoribosyltransferase TVN1370 1441065 - 1441436 + | hypothetical protein TVN1371 1441923 - 1442264 + | hypothetical protein TVN1372 1443653 - 1442259 - | DNA polymerase II small subunit TVN1373 1443757 - 1444614 + | DMT family permease TVN1374 1445804 - 1444617 - | NAD-dependent aldehyde dehydrogenase TVN1375 1447296 - 1445839 - | inositol-5-monophosphate dehydrogenase TVN1376 1448115 - 1447366 - | solute-binding protein TVN1377 1449209 - 1448112 - | hypothetical protein TVN1378 1449429 - 1451111 + | Fe-S oxidoreductase TVN1379 1451146 - 1452246 + | hypothetical protein truD 1452239 - 1453468 + | tRNA pseudouridine synthase D TVN1381 1454865 - 1453486 - | membrane glycosyltransferase TVN1382 1455843 - 1454962 - | electron transfer flavoprotein subunit alpha TVN1383 1456577 - 1455840 - | electron transfer flavoprotein subunit beta TVN1384 1457884 - 1456691 - | major facilitator superfamily permease TVN1385 1457991 - 1458422 + | hypothetical protein TVN1386 1459776 - 1458424 - | dihydrolipoamide dehydrogenase TVN1387 1459898 - 1460734 + | CBS domain-containing protein TERM 669 1460757 - 1460783 + G 73 -10.2 -2.56568 | opp_overlap 1460763 1460765 1460769, overlap 1460756 1460765 GGATGTTGTCGAACT GGCAAAGAGAAG GGG CTTCTTTTGGCC CTCGTTTTCTATTTA TVN1388 1460731 - 1462161 + | glycyl-tRNA synthetase TVN1389 1463377 - 1462163 - | membrane component of an uncharacterized iron-regulated ABC-type transporter TVN1390 1464819 - 1463374 - | membrane component of an uncharacterized iron-regulated ABC-type transporter TVN1391 1465560 - 1464820 - | Iron-regulated ABC transporter ATPase subunit TVN1392 1465653 - 1466300 + | transcription regulator TVN1393 1466311 - 1466613 + | aromatic ring hydroxylating enzyme TERM 670 1466607 - 1466617 + F 73 -4 -5.093 | overlap 1466601 GGCTCTGAACATTGA TGAA TGA TTCA TTTTATTCTTTTCGA TVN1394 1466683 - 1467237 + | transcription factor TERM 671 1467228 - 1467250 + T 93 -9.2 -4.51197 | GCTCCAAAAAGTCGG CCTGATCTAA TTA TTCGATCAGG TTTTCCTTAATTATC TVN1395 1469217 - 1467238 - | Fe-S oxidoreductase TERM 672 1468443 - 1468430 - G 75 -2.3 -5.26875 | TCTGCAAGCAAAAAA GGCGT GCCT ACGGC GGAGTTTCCAAGTAT TERM 673 1469357 - 1469337 - R 85 -9 -4.1196 | gap 1, overlap 1469339 AATTGATGGGGAAAA CACTCGCCC TTTA GGGCGAG-G AAGCCAGATTGGCTT TERM 674 1469356 - 1469339 - R 95 -12.7 -3.65542 | overlap 1469337 TTGATGGGGAAAACA CTCGCCC TTTA GGGCGAG GAAGCCAGATTGGCT TVN1396 1470524 - 1469397 - | major facilitator superfamily permease TVN1397 1470598 - 1470915 + | hypothetical protein TVN1398 1471506 - 1470916 - | hypothetical protein TVN1399 1471558 - 1472127 + | ankyrin repeat-containing protein TERM 675 1472626 - 1472604 - g 76 -7.6 -4.23674 | overlap 1472605 TTGGATCAAGACAAA TCCCATGCCA AAC TGGCTTGGGG TAAGGTTCACAAATT TERM 676 1472625 - 1472605 - g 79 -11.1 -3.13722 | overlap 1472604 TGGATCAAGACAAAT CCCATGCCA AAC TGGCTTGGG GTAAGGTTCACAAAT TVN1400 1472194 - 1473030 + | adenine-specific DNA methylase TVN1401 1473053 - 1473478 + | stress-induced protein TVN1402 1474114 - 1473494 - | alpha/beta superfamily hydrolase TERM 677 1473910 - 1473897 - G 79 -6.7 -4.58395 | TTTACGCTGTAAAAA TCCGA TGGT TCGGA CATGCCAAAGCCGGG TVN1403 1475309 - 1474209 - | HD family phosphatase TVN1404 1475681 - 1476274 + | SAM-dependent methyltransferase TVN1405 1477077 - 1477736 + | hypothetical protein fabG 1478495 - 1479238 + | 3-ketoacyl-(acyl-carrier-protein) reductase TVN1407 1480482 - 1479283 - | major facilitator superfamily permease TERM 678 1480335 - 1480347 + g 73 -2.6 -5.1861 | GGCTGTCTGAGAAAC CTGC CAATA GCGG TTTTTTCGTAATAAA TERM 679 1480477 - 1480503 + g 84 -3.8 -5.53436 | opp_overlap 1480478 1480482 1480484, overlap 1480478 ATTTGATTTTAAGTT ATACATATAAGA TTA TCTTATACGTAA TTTTTTATCTTATAT TERM 680 1480478 - 1480502 + g 70 -7.3 -3.89621 | opp_overlap 1480478 1480482 1480484, overlap 1480477 TTTGATTTTAAGTTA TACATATAAGA TTA TCTTATACGTA ATTTTTTATCTTATA TVN1408 1480525 - 1481172 + | transcription regulator TERM 681 1481945 - 1481935 - T 73 -4 -5.07107 | GAAATTTTTAAAAAA GTAT TCA ATAC TCGATGGAAAAGATA TVN1409 1483385 - 1483149 - | IS5 inactivated transposase TVN1410 1484040 - 1483393 - | IS5 inactivated transposase TVN1411 1484829 - 1485662 + | hypothetical protein TVN1412 1485966 - 1485676 - | hypothetical protein TERM 682 1486742 - 1486760 + H 77 -8.8 -3.66803 | AATGATGGTGGAGTT CAGGTGTG CCA CACTCCTG TTTGAGATGTTCGGA TERM 683 1487214 - 1487192 - g 73 -5.6 -4.54026 | CTGCAAAGAAAATAA CCTTAATTGT TTA ACAGCTAAGG AATGGATAAAACGGC TVN1413 1487043 - 1487993 + | adenine-specific DNA methylase TVN1414 1488041 - 1488832 + | hypothetical protein TERM 684 1489207 - 1489190 - f 75 -9.9 -2.5547 | opp_overlap 1489190, overlap 1489189 1489205 ATCGCCCATACTAAC TGGTGCT TGTA AGCACCA TCACTTGCAACAGCA TERM 685 1489190 - 1489207 + F 75 -9.9 -2.52464 | opp_overlap 1489190 1489189 1489205 ATCGCCCATACTAAC TGGTGCT TGTA AGCACCA TCACTTGCAACAGCA TERM 686 1489442 - 1489466 + F 74 -9.4 -3.14848 | opp_overlap 1489434 1489442, overlap 1489434 1489441 TCGATAACTCATATA TGTGAGTTTC TTGCC GGAACTCACA GTTTTCATACCGAAC TVN1415 1489932 - 1490552 + | hypothetical protein TVN1416 1490633 - 1491781 + | adenine-specific DNA methylase TVN1417 1493393 - 1493094 - | hypothetical protein TERM 687 1493762 - 1493774 + H 82 -7.7 -4.63184 | TGAGAGTCATTTCGA GACGA TCT TCGTC TTTTTCGGGTGCGTT TERM 688 1493803 - 1493817 + H 76 -4.2 -5.16206 | TTTTTTACTCTGGAA CCTGTA TTA TGCGGG TTTTTCTGTTCGTTT TERM 689 1493911 - 1493945 + H 93 -10.3 -3.9978 | gap 1, opp_overlap 1493922, overlap 1493922 CTAGAGAATACTGGG TCTACATAAAATCCCA CATG TGGGATTTTATG-GGA TTCTTCATTTTCTAA TERM 690 1493935 - 1493922 - H 76 -6.7 -4.52589 | opp_overlap 1493911 1493922 TGGGTCTACATAAAA TCCCA CATG TGGGA TTTTATGGGATTCTT TERM 691 1493922 - 1493935 + H 74 -6.7 -4.44461 | opp_overlap 1493922, overlap 1493911 TGGGTCTACATAAAA TCCCA CATG TGGGA TTTTATGGGATTCTT TVN1418 1494356 - 1494658 + | hypothetical protein TVN1419 1496037 - 1494892 - | multidrug efflux permease TVN1420 1497099 - 1496158 - | hypothetical protein TVN1421 1497152 - 1497634 + | hypothetical protein TVN1422 1498425 - 1497808 - | transcription regulator TVN1423 1500026 - 1498611 - | amino acid transporter TVN1424 1500171 - 1502957 + | ABC-type peptide transport system, solute-binding component TVN1425 1504393 - 1503014 - | multidrug efflux permease TERM 692 1503454 - 1503444 - G 75 -8.2 -3.745 | GCACCCAGCAAAAGA GGGC CAC GCCC AGTACGGTCGTAGAG TVN1426 1505227 - 1504499 - | flagellin TERM 693 1504846 - 1504875 + g 84 -10.7 -3.65991 | opp_overlap 1504843 1504837 TGTAAACTAATACCG CCGTAACGCCTCC TACT GTAAGCGTTACGG TTGTGTTGGCAAGGT TVN1427 1505360 - 1506196 + | transposase TVN1428 1506208 - 1506684 + | GTP:adenosylcobinamide-phosphate guanylyltransferase TVN1429 1507411 - 1506668 - | ABC-type Fe3+-siderophores transporter, ATPase component TVN1430 1507869 - 1507408 - | hypothetical protein TVN1431 1508394 - 1507900 - | hypothetical protein TVN1432 1509541 - 1508405 - | NAD(FAD)-dependent dehydrogenase TVN1433 1509783 - 1509547 - | transcription regulator TVN1434 1510207 - 1509794 - | hypothetical protein TVN1435 1510489 - 1510824 + | DNA-directed RNA polymerase subunit L TVN1436 1510821 - 1511783 + | DNA modification methylase TERM 694 1512733 - 1512721 - g 76 -7.7 -4.11585 | ACGGATCACAAATAA TGCAG AAC CTGCA GACAGTTGAAATGGC TVN1437 1511805 - 1513619 + | RNA-binding protein snRNP TVN1438 1513716 - 1514630 + | bifunctional phosphoglucose/phosphomannose isomerase TVN1439 1515408 - 1514647 - | hypothetical protein TVN1440 1515492 - 1515776 + | hypothetical protein TVN1441 1516243 - 1515782 - | RNA-binding protein TVN1442 1517583 - 1516240 - | hypothetical protein TERM 695 1516763 - 1516751 - G 72 -6.3 -4.38141 | TTCGATATAAAAGAA TCGAT ACT ATCGA AGCATTTCTGATCTA nusG 1518454 - 1517588 - | transcription antitermination protein NusG TERM 696 1518168 - 1518181 + g 78 -2.4 -5.47159 | opp_overlap 1518168 TTCGGAGCGTATACA GTCA AACCTA TGAC TTTTTCTTTATTCCC TVN1444 1518786 - 1518472 - | protein translocase subunit Sss1 TERM 697 1519677 - 1519697 + r 79 -8.3 -4.05322 | opp_overlap 1519677 CAGTCTCTTCAGAAG TTCTTCCGT TAA GCGGGAGAA TTTATCTGAAGATTT TERM 698 1519768 - 1519795 + r 80 -10.6 -3.02043 | gap 1, overlap 1519759 1519784 TCACCACTCGAGCTG CGGGTGTTA-CCG CGG CGGCTGGCACCCG TCTTGCCCAGCCCTT TERM 699 1519860 - 1519840 - R 100 -11.2 -4.4767 | overlap 1519858 TTAGGCATCAGAAAA GCCTTGAC GAAAA GTCAAGGC ACTCAGGTTCCCCGT TVN1445 1521671 - 1520544 - | hypothetical protein TVN1446 1523495 - 1521948 - | alternative thymidylate synthase TVN1447 1523650 - 1523868 + | transcription regulator (HTH) TERM 700 1524568 - 1524540 - g 75 -8.9 -3.65902 | opp_overlap 1524540 1524539 1524544 GCTACCGGAGTTAAA GTCATCGATCCTA CCG TAGGAGCGATTAC ATTTGTTACTCTGGT TVN1448 1523979 - 1525115 + | hypothetical protein TERM 701 1525124 - 1525113 - g 71 -3 -5.06414 | GGGCTTGAACAAAAA TGAA CCTG TTCA GGTGGATGGATATAT TERM 702 1525541 - 1525525 - g 73 -5.8 -4.57353 | overlap 1525526 TGGGACTACACAAAA CCTGCC GTATA GGCAGA TAAAGAACTTTTATG TVN1449 1525112 - 1525771 + | hypothetical protein TVN1450 1526026 - 1526682 + | L-fuculose-phosphate aldolase TVN1451 1527255 - 1527611 + | hypothetical protein TVN1452 1527620 - 1528192 + | rusticyanin TERM 703 1528354 - 1528344 - f 71 -6.8 -4.19624 | opp_overlap 1528344 1528343 TATGTTTAATATAAA GGCA AAT TGCC ATTTTCCGTGAGCAG TVN1453 1528548 - 1529492 + | formate hydrogenlyase, subunit 4 TERM 704 1529757 - 1529778 + G 73 -3.7 -4.96773 | opp_overlap 1529746 1529760, overlap 1529744 1529760 AAGTTTACCTGTATG AGAGAAAGG TAAG CCTTTCTTA TTTGTTTTTACTTGA TERM 705 1529760 - 1529775 + G 82 -7.6 -4.53857 | opp_overlap 1529746 1529760, overlap 1529744 1529757 TTTACCTGTATGAGA GAAAGG TAAG CCTTTC TTATTTGTTTTTACT TERM 706 1529878 - 1529897 + G 71 -4.2 -4.87626 | TTTTTTGGGAAATGG CGGGAACT CCTC AGTCCTCG TTTTTCCTCTTACAC TVN1454 1529489 - 1530142 + | hypothetical protein TVN1455 1530139 - 1531482 + | hydrogenase 4 subunit F TERM 707 1532271 - 1532285 + G 73 -8.6 -3.68988 | opp_overlap 1532270 1532271 TTCCGTATAGTAAAC TTGGCT TCA AGCCAA TTGTGTTCGATGAGC TERM 708 1532525 - 1532478 - g 86 -7.8 -4.68593 | gap 1, opp_overlap 1532515, overlap 1532479 1532482 TCTATTATGTAAAAA TCAACGACGG-GAAGATTTCCGA CGT CCAGATATCTTCGCCGTCACTGT TAAACATTGAGGCCT TERM 709 1532524 - 1532479 - g 89 -11.3 -3.40674 | gap 1, opp_overlap 1532515, overlap 1532478 1532482 CTATTATGTAAAAAT CAACGACGG-GAAGATTTCCGA CGT CCAGATATCTTCGCCGTCACTG TTAAACATTGAGGCC TERM 710 1532521 - 1532482 - g 81 -9.4 -3.83042 | gap 1, opp_overlap 1532515, overlap 1532479 1532478 TTATGTAAAAATCAA CGACGG-GAAGATTTCCGA CGT CCAGATATCTTCGCCGTCA CTGTTAAACATTGAG TVN1456 1531469 - 1532638 + | Ni,Fe-hydrogenase III large subunit TVN1457 1532635 - 1533303 + | Ni,Fe-hydrogenase III small subunit TVN1458 1533306 - 1535075 + | hydrogenase 4 subunit B TVN1459 1537058 - 1536123 - | phosphate permease TVN1460 1538296 - 1537727 - | hypothetical protein TVN1461 1538689 - 1538342 - | hypothetical protein TVN1462 1539219 - 1539392 + | hypothetical protein TVN1463 1542170 - 1539639 - | Type III restriction-modification enzyme, helicase subunit TERM 711 1541188 - 1541204 + g 73 -7.3 -4.11216 | TGTGGATTTTCAACC TCGCCTA TAA TAGGTGA TTTTACAACTCCACA TERM 712 1542119 - 1542145 + g 73 -7.3 -4.14257 | gap 1, opp_overlap 1542122 1542123, overlap 1542123 TTCGCAAAGCTTCTA CAAGTGGTGCTG TTGT CTGCACC-CTTG TTTCTGGTTCTTCGA TVN1464 1544017 - 1542167 - | adenine specific DNA methylase TERM 713 1542777 - 1542763 - G 75 -8.6 -3.85698 | opp_overlap 1542763 CCGCTCTTTCAGAAA CCATTC CGT GAATGG TTTTGTAGTCATAAA TERM 714 1542763 - 1542777 + g 87 -8.6 -4.4891 | opp_overlap 1542763 CCGCTCTTTCAGAAA CCATTC CGT GAATGG TTTTGTAGTCATAAA TVN1465 1544648 - 1544340 - | hypothetical protein TERM 715 1544466 - 1544447 - G 79 -10.8 -3.10244 | TCCTGCAAGAAAGCA TGTCCTGA ATCA TCAGGACA ATATACGCAATCATG TVN1466 1545912 - 1545079 - | AAA family ATPase TVN1467 1547906 - 1547379 - | hypothetical protein TERM 716 1548274 - 1548244 - g 100 -15.7 -3.14229 | overlap 1548242 AGAGCGCCATGAAGA TCATCTATCTCAG GTCCA CTGAGATAGATGA GAAATGGTCACAGAG TVN1468 1548174 - 1548359 + | hypothetical protein TVN1469 1548519 - 1548379 - | hypothetical protein TVN1470 1549047 - 1548715 - | hypothetical protein TERM 717 1548990 - 1548972 - G 77 -3.8 -5.09225 | overlap 1548985 AGGCTATGGAAAAAA CCAATGGC AAA ACTATTGG CAATGCCGATATGAA TVN1471 1550017 - 1549136 - | hypothetical protein TERM 718 1550083 - 1550069 - R 70 -7.1 -3.80014 | opp_overlap 1550069 1550068 ACATTTATTAGTAAA CCCTG TAGTT CAGGG CATTTTTTAATATAT TVN1472 1550650 - 1550441 - | hypothetical protein TERM 719 1550661 - 1550680 + r 80 -9.4 -3.63715 | overlap 1550667 ACCATTTTTCACTTC CTCTTTGA ATTT TCAAAGAG TTCTCTCATTCTCTC TERM 720 1550708 - 1550718 + r 71 -3.2 -5.03994 | CTCTTGTCTTGAACC GCTT TTT AGGC TTTTTATATATCCGA TVN1473 1551546 - 1550926 - | hypothetical protein TERM 721 1552473 - 1552456 - g 75 -8.5 -3.87994 | overlap 1552465 AGGTAGGGTCAGAAA TGCAAGA GAGT TCTTGCA GGAACAAATTTAAGT TVN1474 1552310 - 1552486 + | hypothetical protein TVN1475 1555627 - 1552703 - | Type III restriction-modification enzyme, helicase subunit TERM 722 1553933 - 1553947 + g 71 -5 -4.66264 | overlap 1553941 GCTGTTAGGTTCCTC CTTCTT TAC GAGAAG TTTTTCACGATTTTC TVN1476 1557672 - 1555627 - | adenine specific DNA methylase TERM 723 1556920 - 1556938 + g 74 -9.6 -3.25942 | overlap 1556923 TCTCTGAAATGGCTT GAATCGGG CAT CCTGATTC TTGCTGTAAAACAGT TERM 724 1557417 - 1557427 + g 70 -5.4 -4.44914 | opp_overlap 1557408 CGTAAATGAGTCTAT TGAG AAA CTCA TTGTTTTCTTGAGTC TVN1477 1558786 - 1557707 - | AAA family ATPase TVN1478 1559654 - 1559049 - | site-specific recombinase, DNA invertase Pin-related TERM 725 1559958 - 1559982 + r 75 -7.2 -4.24404 | overlap 1559952 TCTGCATTAGGTTAT CGGTTAACCA TTATT TCGTTAACCG TTTTCCGATTTAAGT TVN1479 1560541 - 1560032 - | hypothetical protein TVN1480 1561618 - 1560863 - | ATPase involved in chromosome partitioning TERM 726 1561053 - 1561063 + g 74 -4 -4.91987 | ACATCCTCAAGCACC TCAT TCG ATGA TTTTGTTCTTGAATT TERM 727 1561925 - 1561935 + r 77 -5.4 -4.91873 | CATTGTTTCGGCTTG GGTT AAC AACC TTTTTACTTAATCTG TVN1481 1563720 - 1561939 - | ATPase TERM 728 1562737 - 1562749 + g 70 -7.7 -3.63068 | opp_overlap 1562737 1562732 GAGCTTGAAAGTGAA CTTCG TGC CGAAG TTTGCCCTCATCTCC TVN1482 1564062 - 1563727 - | hypothetical protein TVN1483 1564430 - 1564065 - | hypothetical protein TVN1484 1565306 - 1564647 - | hypothetical protein TERM 729 1564713 - 1564725 + g 75 -3.3 -5.24129 | CCAGTCCTTGTATTC GCTGG CAT CAAGC TTTTTTCTGAAGAAA TVN1485 1565548 - 1565306 - | integrase/recombinase TVN1486 1565885 - 1565673 - | hypothetical protein TERM 730 1566305 - 1566288 - R 79 -4.1 -5.24796 | opp_overlap 1566288 1566289 1566291, overlap 1566289 GGGATACAATAAAAA GTACCGT TCCT ACGGTAA TTGTTCTATTTATAG TERM 731 1566304 - 1566289 - R 73 -7.6 -3.73793 | opp_overlap 1566289 1566288 1566291, overlap 1566288 GGATACAATAAAAAG TACCGT TCCT ACGGTA ATTGTTCTATTTATA TVN1487 1566873 - 1566346 - | hypothetical protein TVN1488 1567560 - 1566919 - | hypothetical protein TVN1489 1569041 - 1567752 - | integrase/recombinase TERM 732 1569667 - 1569650 - g 82 -4.9 -5.31072 | AGAATACAAGAAAAA GCTAATC ATAG GATTAAC TGCGAGCCCTGGGGG TERM 733 1569792 - 1569781 - g 78 -4.4 -5.14985 | GGAAATACATAAAAA GCAT AGAG ATGC ACCTAATAAAGCTGA TERM 734 1570701 - 1570729 + G 71 -4.5 -4.63184 | opp_overlap 1570701, overlap 1570728 GAGAGACAGGAAAAC TCGAATAACGGCC AGA GGACTATATTCGA TTTTTAAAGTCAGTT TVN1490 1569195 - 1570736 + | RNA helicase (ERCC4-like) rfc 1571695 - 1570739 - | replication factor C small subunit TVN1492 1573134 - 1571797 - | glutamine synthetase TVN1493 1573262 - 1573729 + | transcription regulator TVN1494 1574003 - 1578382 + | hypothetical protein TERM 735 1579260 - 1579285 + G 77 -4.7 -5.00616 | overlap 1579258 CATAGTTAAGCCACT TTCCGGTGGAG GGAT TTACACTGGAA TTTTTTCAGCAAACC TVN1495 1578466 - 1579590 + | geranylgeranyl reductase TVN1496 1579713 - 1580570 + | DMT family permease TVN1497 1582453 - 1580555 - | 7-cyano-7-deazaguanine tRNA-ribosyltransferase TERM 736 1580978 - 1581000 + g 75 -5.7 -4.62085 | gap 1, opp_overlap 1580973, overlap 1580973 TCCAATACCATATCC GAACTGATAG TCGG CTATC-GTTC TTATTTTTTCAAGGT TERM 737 1581794 - 1581779 - G 71 -2.4 -5.22943 | AGCAAAGGCAAAAAA CATCGG ATGG CCGCCG CCGAATAGATGTATG TVN1498 1584229 - 1582460 - | putative ATPase RIL TERM 738 1583167 - 1583185 + g 84 -3.9 -5.5353 | gap 1, overlap 1583170 GGCCAGCATGCACAT CTAGAGAG AAGT CTC-CTAG TTTTTTCTTGATATC TVN1499 1584691 - 1584239 - | hypothetical protein TERM 739 1584475 - 1584456 - G 85 -7.2 -4.85599 | gap 1, overlap 1584460 TCCATTGTATAAAAA GAATCCCGA TCT TCGGG-TTC AAGCATATTATCTAT TERM 740 1584472 - 1584460 - G 71 -9.1 -3.31001 | overlap 1584456 TTGTATAAAAAGAAT CCCGA TCT TCGGG TTCAAGCATATTATC