TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.394048 %AT, 1540617 nt, 11775 terms. Intergenic: 0.4469 %AT, H2T: 150115 nt, 1158 terms; T2T: 59814 nt, 844 terms; H2H: 59250 nt, 995 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|171184485|ref|NC_010525.1| Thermoproteus neutrophilus V24Sta, complete genome (length 1769823) Tneu_0001 75 - 1244 + | orc1/cdc6 family replication initiation protein Tneu_0002 1241 - 1519 + | regulatory protein ArsR Tneu_0003 1555 - 2136 + | hypothetical protein Tneu_0004 2187 - 2438 + | hypothetical protein Tneu_0005 2423 - 3520 + | aIF-2BI family translation initiation factor Tneu_0006 3629 - 3946 + | hypothetical protein Tneu_0007 3943 - 5070 + | PUA domain-containing protein Tneu_0008 5296 - 5057 - | hypothetical protein Tneu_0009 5361 - 6023 + | AMMECR1 domain-containing protein Tneu_0010 6462 - 5995 - | hypothetical protein TERM 1 6353 - 6376 + g 79 -15.3 -2.88249 | GTATACCTGGCTACC GCCTCCGCC TGAGGC GGCGGAGGC TGTCTACGGGCTATG Tneu_0011 6814 - 6650 - | hypothetical protein Tneu_0012 7135 - 7470 + | hypothetical protein Tneu_0013 7467 - 8522 + | H+-transporting ATP synthase subunit C Tneu_0014 8794 - 8519 - | H+transporting two-sector ATPase C subunit Tneu_0015 8958 - 8809 - | hypothetical protein Tneu_0016 9588 - 8980 - | V-type ATPase, D subunit TERM 2 9579 - 9597 + g 90 -6 -5.1615 | GTGGTCTAAACGCCA CTTGGC CCACAAC GCCAAG TTTTTTAAATATTGC Tneu_0017 9625 - 10404 + | GTP-binding protein HSR1-related TERM 3 10429 - 10406 - f 79 -8.8 -4.24623 | gap 1, opp_overlap 10405 10406 10410 CTAAACAGATATAAA CACCCGG-CGG ATC CCGGCCGTGTG GTTGTCTATACTGGC TERM 4 10838 - 10820 - g 86 -14.6 -3.35679 | opp_overlap 10815 GGCCGTCACCGAGAA CCTCCTGG TCC CCAGGAGG AGGGCTAGGGTGATC Tneu_0018 10425 - 10898 + | hypothetical protein Tneu_0019 11548 - 11000 - | hypothetical protein TERM 5 12100 - 12137 + G 76 -14.1 -3.09492 | gap 1, opp_overlap 12098 AGCGGCCTCAAGATC GCCGTGTGG-GGAACCAC CGA GTGGGGCCTCCGCACGGC TATTACGCTTAGGAG Tneu_0020 11665 - 13077 + | hypothetical protein Tneu_0021 14348 - 13059 - | phosphomannomutase Tneu_0022 14396 - 15508 + | hypothetical protein Tneu_0023 16113 - 15505 - | orotidine 5'-phosphate decarboxylase TERM 6 16206 - 16177 - H 72 -3.5 -4.83169 | opp_overlap 16201 16202, overlap 16180 AGGTGTCTATAAAAA CAACGCCACAC CTAGGGCT ATGTGGCGCGG GAGAGATGTGATTTC TERM 7 16203 - 16180 - H 75 -6 -4.52873 | opp_overlap 16201 16202, overlap 16177 TGTCTATAAAAACAA CGCCACAC CTAGGGCT ATGTGGCG CGGGAGAGATGTGAT Tneu_0024 16196 - 17110 + | aspartate carbamoyltransferase Tneu_0025 17221 - 17751 + | ribosomal-protein-alanine acetyltransferase TERM 8 17911 - 17921 + G 71 -8.2 -4.08216 | CTTGGGGGTTTTGAG CGCC GGC GGCG TTTTCACGGCGCTGG TERM 9 18514 - 18550 + G 77 -10.9 -3.59979 | CTTAGGCGTCGTCAT GGCCCTCTTCATAAACG TGC CGCTTATGAAGATGGAC TTTAGGATCCCCCCG Tneu_0026 17789 - 19318 + | hypothetical protein Tneu_0027 19322 - 20806 + | type II secretion system protein E Tneu_0028 20784 - 20996 + | hypothetical protein Tneu_0029 20993 - 21505 + | hypothetical protein Tneu_0030 21573 - 23057 + | tRNA-guanine transglycosylase, various specificities Tneu_0031 23759 - 23040 - | hypothetical protein Tneu_0032 24268 - 23756 - | transcription factor TFIIE, alpha subunit Tneu_0033 25572 - 24361 - | GTP-binding proten HflX TERM 10 24563 - 24532 - G 71 -5.8 -4.40561 | gap 1, overlap 24534 24560 CGTTTTGAAAAACAA CACGGCTTTGAGCGC CTC GATCCCAAAGCCG-G TAAGGGCGGACACCG TERM 11 24562 - 24534 - G 71 -9.5 -3.80746 | overlap 24532 24560 TTTTGAAAAACAACA CGGCTTTGAGCGC CTC GATCCCAAAGCCG GTAAGGGCGGACACC Tneu_0034 26044 - 25562 - | XRE family transcriptional regulator TERM 12 25796 - 25814 + g 74 -5.9 -4.57569 | opp_overlap 25795, overlap 25798 GGCCTCTCTAGATAG GCCGAGG TTCTC CCTCGCC TTTTTCACCACCTCG Tneu_0035 26090 - 26548 + | PUA domain-containing protein Tneu_0036 26795 - 26514 - | hypothetical protein Tneu_0037 27072 - 26779 - | hypothetical protein TERM 13 27076 - 27060 - G 79 -8 -4.57569 | TTACCTGCTCAAAAA GGACGT CGCTC ACGTCC CCCCACTCGGCGTCG Tneu_0038 27171 - 27413 + | like-Sm ribonucleoprotein core Tneu_0039 27410 - 27568 + | ribosomal protein L37e TERM 14 27601 - 27573 - f 100 -4.5 -5.79595 | overlap 27574 GGGCAAAATAAAAAA CCTCCGCCGCT ATATAGA AACGGTGGAGA AGGCCCGTCATCGCT Tneu_0040 27626 - 28246 + | multiple antibiotic resistance (MarC)-related protein TERM 15 28669 - 28688 + G 71 -5.6 -4.36411 | overlap 28682 CTTCATAGCGCAGGT GGACTGGG GCTC CCTAGACC TTTTAGTCGTTGATC TERM 16 29066 - 29050 - g 72 -2.1 -4.86731 | opp_overlap 29056 29063, overlap 29055 CCTCGCGAAAGAAAA CGACACC GCC AGAGCCG TATTGGCTATAGTGG Tneu_0041 28274 - 29188 + | hypothetical protein TERM 17 29317 - 29297 - T 77 -8.1 -4.27117 | GGCTCATAATACAAA CGTCGCCGG TTC CCGGCGGAG CGTGGCGGAACAGAA Tneu_0042 29745 - 29350 - | cytidine deaminase TERM 18 30567 - 30577 + G 73 -4.6 -4.66833 | overlap 30557 GGGGGGTCCCCGGTG CCGC GAC GTGG TTTTTAGGCTTGAGA Tneu_0043 29809 - 30756 + | hypothetical protein Tneu_0044 30789 - 31568 + | short-chain dehydrogenase/reductase SDR Tneu_0045 32849 - 31557 - | glycine hydroxymethyltransferase Tneu_0046 33715 - 32978 - | molybdopterin cofactor biosynthesis protein with MoaC region Tneu_0047 34041 - 33712 - | hypothetical protein TERM 19 33805 - 33820 + g 81 -4.6 -4.91109 | GATGAGTATCTTAGC CGCCAG CAAC CTCGCG TTTTTCTCGTCCAGC Tneu_0048 35134 - 34070 - | isopentenyl-diphosphate delta-isomerase, type 2 TERM 20 34305 - 34248 - G 74 -12.7 -3.21276 | gap 1, overlap 34268 GCCGCCTTTAGAAGA GGTTGCGACATGGTGAAGAAGCTGGCGC CTA GCGCCAACGCCTTCACGCCGTCG-AGCC CGCTTCTGATGCCCC TERM 21 34286 - 34268 - G 82 -12.4 -3.64487 | overlap 34248 CGACATGGTGAAGAA GCTGGCGC CTA GCGCCAAC GCCTTCACGCCGTCG TERM 22 34585 - 34570 - G 80 -11.8 -3.78934 | opp_overlap 34569 34568 CCTCTTTTACAATAA GCGGCC TGCC GGCCGC CCTTTTCACCACCTT Tneu_0049 35871 - 35134 - | ribosomal protein L2 Tneu_0050 36019 - 36234 + | 30S ribosomal protein S17e TERM 23 36227 - 36217 - f 79 -6.8 -4.75404 | AAAGCCCAGGAAAAA GCTG AGG CAGC GGCGTAACCATGCCG Tneu_0051 36237 - 36926 + | peptidylprolyl isomerase, FKBP-type Tneu_0052 36957 - 37562 + | proteasome endopeptidase complex Tneu_0053 37597 - 38850 + | phosphopyruvate hydratase TERM 24 38876 - 38914 + F 78 -12.3 -3.43961 | opp_overlap 38866 AAGCACGTCGATCCG GTTTCCCGCCCGCCGCG TTTCT CGCGGAGGGGGCGAGAC TTGTCGCTGTTGTGA Tneu_0054 38960 - 39376 + | ModE family transcriptional regulator Tneu_0055 40338 - 39361 - | molybdenum cofactor biosynthesis protein A TERM 25 39442 - 39455 + g 76 -5.9 -4.59109 | AAACCTCGGCTCTCT CTGCG CCAA CGCGG TTTTTACGGCATATA TERM 26 41520 - 41496 - g 71 -8.5 -4.04206 | overlap 41497 CCACCTCGACATAAA GCCCGAGAACA TCA TGTTCACGGGG GATAGAAAAACGGCG TERM 27 41642 - 41632 - g 78 -2.4 -5.0538 | opp_overlap 41634 CCGGAGGTTAAAAAA GGCG CGG CGTC TCTGGCGTCCGACGT Tneu_0056 40423 - 41874 + | serine/threonine protein kinase Tneu_0057 41877 - 42329 + | FHA domain-containing protein Tneu_0058 42378 - 42998 + | ribosomal protein S2 TERM 28 43247 - 43267 + G 74 -12.5 -3.23216 | opp_overlap 43234 TACGCCGCCCTGTCG GGCTTCGGG AAG CCCGACGCC TTCGTCATAGTGGGG Tneu_0059 43028 - 43876 + | hypothetical protein Tneu_0060 46037 - 44133 - | beta-lactamase domain-containing protein TERM 29 45794 - 45762 - G 80 -14.9 -3.0094 | opp_overlap 45746, overlap 45764 45785 45786 45788 GGCGAGGTAGATATA GACGTCGCCGCTTTC CTC GAAAACGACGTCGTC GACGTCCTCCACCAC TERM 30 47389 - 47370 - g 71 -7.8 -4.10161 | GAGGAGGCCGTAAAA GCGCTGGT GGAG ACCAGGGC AAGGCTACGCCAAGA Tneu_0061 46086 - 47510 + | cysteinyl-tRNA synthetase Tneu_0062 51113 - 47523 - | hypothetical protein TERM 31 48457 - 48431 - G 85 -6.5 -4.84359 | overlap 48433 CCACGTCGACAAAAA CGCTCTGCGTC CCGTT GACGTAGAGGG GAACTCTCAAGGTTA TERM 32 49304 - 49314 + g 73 -4.6 -4.59773 | CCTGGCCTACCCTAA CGTC GAC GGCG TTTTTACCGATCGGG TERM 33 49845 - 49826 - G 71 -7 -4.14392 | GCGGAATCTGCAAAA CGGCGCCG CCCC CGAAGCCG GGGCACCCAGCCGCC TERM 34 52001 - 51956 - g 84 -11.2 -4.07568 | gap 1 GCTCCCCGGCGAAAA CGCCACGGCG-TGGCTCTG GCTCTACAA CAGAGGCAACGCCACGGCG GAGGTCAAAATCGAC Tneu_0063 51171 - 53072 + | hypothetical protein TERM 35 54095 - 54147 + G 72 -14 -2.62616 | gap 1, opp_overlap 54098, overlap 54109 ATCTATGACGCTTAA CAAGACCGCAGG-CCCCGGCACCGG CACG CCGGTGCCCATGTCCTGCGGCCTGG TGATCTGGAACATGA TERM 36 54144 - 54098 - g 100 -18.7 -3.63991 | gap 1, opp_overlap 54095 54109 TATGACGCTTAACAA GACCGCAGG-CCCCGGCACCGG CACG CCGGTGCCCATGTCCTGCGGCC TGGTGATCTGGAACA TERM 37 60890 - 60863 - g 77 -11.3 -3.61715 | CAGCTCGCCGAAGAA CGTGGAGGTGC TGGCGG GCACCTACACG GTTAAGGTGCAGGCT Tneu_0064 53112 - 61142 + | hypothetical protein TERM 38 61283 - 61311 + G 81 -4.5 -4.89852 | gap 1, overlap 61274 TCTTCCCGAGGCCCA CCCCGTGCTCTC TGGCAT GAG-GAGCGGGG TTTTTGTCACTGTGG Tneu_0065 61200 - 61796 + | AMMECR1 domain-containing protein Tneu_0066 61826 - 62650 + | hypothetical protein Tneu_0067 62631 - 63161 + | adenylyl cyclase CyaB Tneu_0068 63169 - 64923 + | DNA ligase I, ATP-dependent Dnl1 Tneu_0069 65402 - 64911 - | hypothetical protein Tneu_0070 65443 - 66360 + | ribokinase-like domain-containing protein Tneu_0071 66383 - 66718 + | hypothetical protein Tneu_0072 66715 - 67392 + | nucleotidyl transferase Tneu_0073 67424 - 68143 + | hypothetical protein Tneu_0074 68140 - 68694 + | hypothetical protein TERM 39 69270 - 69254 - g 73 -8.7 -3.85698 | opp_overlap 69255 CGTCGGCTCCACAAA CCTCCAG GGA CTAGAGG AGCTGTTGGTCGCCG Tneu_0075 68793 - 69860 + | hypothetical protein Tneu_0076 70647 - 70360 - | hypothetical protein Tneu_0077 71516 - 70617 - | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein TERM 40 70722 - 70732 + gr 82 -8.2 -4.58395 | overlap 70693 GGTTGGGGCCACGGC CGGG CAC CCCG TTTTTAGACAGTCGC Tneu_0078 71913 - 71509 - | hypothetical protein Tneu_0079 72242 - 72553 + | 50S ribosomal protein L14e Tneu_0080 72550 - 73545 + | pseudouridylate synthase subunit TruB Tneu_0081 73569 - 73862 + | hypothetical protein Tneu_0082 73859 - 74356 + | hypothetical protein Tneu_0083 74383 - 74844 + | hypothetical protein Tneu_0084 74874 - 75812 + | oxidoreductase domain-containing protein TERM 41 76018 - 75996 - g 70 -3.5 -4.62069 | gap 2, overlap 75997 CCGGCAGTGGAAAAA CCGCGATGCTT AGG AAGC-TCG-GG CTCTACCTCTCGAGG Tneu_0085 75863 - 76402 + | hypothetical protein TERM 42 76394 - 76380 - T 76 -7.1 -4.63218 | opp_overlap 76380 CCTTCTTGAACAAAA CCGTG GAGAT CACGG TAATATAGAAAGCAG Tneu_0086 76970 - 76389 - | abortive infection protein TERM 43 77199 - 77249 + G 84 -9.7 -4.4648 | opp_overlap 77228 GGCTCTGGAGGAGGC CGCGGCGGCCCAC-GCCGAGTTTAT AAA ATCCGCTAGGCTGT-GGCCGCTGCG TTTTCTAATGCCGGT Tneu_0087 76999 - 77460 + | hypothetical protein Tneu_0088 78247 - 77432 - | molybdopterin binding domain-containing protein TERM 44 77730 - 77714 - G 79 -7.9 -4.56597 | CCTCTCGGCGAAAAA CACGGGA GGC CCCCGCG ACTTGAGAAGAGGCT Tneu_0089 79113 - 78256 - | hypothetical protein Tneu_0090 79151 - 79561 + | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen Tneu_0091 79558 - 79779 + | hypothetical protein Tneu_0092 80152 - 79763 - | hypothetical protein Tneu_0093 80871 - 80203 - | DNA-(apurinic or apyrimidinic site) lyase TERM 45 80719 - 80731 + g 74 -3.3 -4.83615 | overlap 80720 CTTCAAGCTGTTGAA GGCCT TGA AGGCG TTTTTATCGGAGGTG Tneu_0094 80916 - 81407 + | hypothetical protein Tneu_0095 81452 - 82228 + | hypothetical protein Tneu_0096 82312 - 83787 + | carboxypeptidase Taq Tneu_0097 84422 - 83784 - | hypothetical protein Tneu_0098 84464 - 84925 + | cytidyltransferase-like protein Tneu_0099 86218 - 84911 - | hypothetical protein TERM 46 85137 - 85096 - G 70 -12.1 -2.91912 | opp_overlap 85108 CGAGGTAGTTATACA CGGCGGACCACGCGGCGTA GGGA TCCGCCTCGGGGTTCGCCA AGCCGTATTCCTCAA Tneu_0100 86665 - 86321 - | hypothetical protein Tneu_0101 87598 - 86789 - | hypothetical protein TERM 47 88105 - 88075 - g 85 -15.4 -3.17763 | opp_overlap 88080 CGCACAGGCTAGGAA GATCATCTCGGCGC TAG GCGCCGAGGTGGTC TACACGGCCTCCACC TERM 48 88080 - 88100 + G 76 -14.7 -2.62263 | opp_overlap 88075 AGGCTAGGAAGATCA TCTCGGCGC TAG GCGCCGAGG TGGTCTACACGGCCT Tneu_0102 87617 - 88549 + | prephenate dehydratase Tneu_0103 90701 - 88512 - | DEAD/DEAH box helicase domain-containing protein TERM 49 89420 - 89436 + g 78 -4.4 -4.77036 | overlap 89421 TGACGTACCTCTCCA TGAGGT AGCCC ACCTCG TTTTTACTCCTCGCC TERM 50 90187 - 90217 + g 74 -6 -4.57569 | opp_overlap 90167, overlap 90171 90189 CCCCTCCTCGGGTCG CCGAGGTAGTGGAT CTC GTCCACCACCACCG TTTTTACAGAGCTCA TERM 51 90713 - 90680 - G 74 -6.7 -4.36914 | gap 1, opp_overlap 90644 90642 90707 TCGGCTGTGAGAAAA CCCCCGCCATG-ATTT TCG ACATGCACGCCGGGGG CGGCCCCGTCCGCGG Tneu_0104 92830 - 90782 - | MCM family protein TERM 52 91513 - 91499 - G 70 -12.8 -2.87132 | opp_overlap 91509 CCTGTTGGGGAGATA CCGGCC GAA GGCCGG GTTCGCCGCGGCCAA TERM 53 92905 - 92858 - H 74 -2.7 -4.86293 | gap 2, overlap 92860 92869 CAATAAAAACCAAAA CAGGTGATACAGCAGACCGCCCA TCCC CAGGCGCTCTGCC-CATCGCC-G ACCCTAGCGGCACCC Tneu_0105 93166 - 93483 + | hypothetical protein Tneu_0106 93728 - 93435 - | hypothetical protein Tneu_0107 93741 - 94064 + | hypothetical protein TERM 54 94129 - 94147 + G 82 -9.6 -4.41348 | opp_overlap 94127 94129, overlap 94140 CATGGAGTCGAAATA TAGGGAGG AGC TCTCCCTA TTTCTTTCCAGAACA Tneu_0108 94115 - 94468 + | roadblock/LC7 family protein Tneu_0109 94468 - 94926 + | hypothetical protein Tneu_0110 94983 - 95414 + | hypothetical protein Tneu_0111 95431 - 95832 + | hypothetical protein TERM 55 98009 - 98033 + G 73 -9.9 -3.59979 | overlap 98012 GGTTAACGGCCTTCC CAACGCCACGG GCG CCGTAGCGTCG TTTAGGGTGACGGCG Tneu_0112 95877 - 98417 + | hypothetical protein Tneu_0113 98468 - 99790 + | hypothetical protein Tneu_0114 99787 - 100233 + | hypothetical protein TERM 56 102056 - 102086 + G 72 -11.8 -3.35679 | opp_overlap 102080 102081 GACCCTAGACATGGC GGGGGCGTTCGTGC GCA GGATGAACGCCACC TTGTGGGTCAACGCC Tneu_0115 100230 - 103532 + | hypothetical protein Tneu_0116 103534 - 104202 + | hypothetical protein Tneu_0117 104199 - 104732 + | hypothetical protein Tneu_0118 105018 - 104719 - | hypothetical protein Tneu_0119 105593 - 105039 - | methyltransferase type 11 Tneu_0120 106810 - 105821 - | AAA ATPase Tneu_0121 107421 - 106900 - | PaREP1 family protein Tneu_0123 108909 - 108046 - | transposase, IS605 OrfB TERM 57 109091 - 109043 - H 80 -15.3 -2.71483 | ACATTCTTTCAACTA TTTCGGCTCACCTGCTTAACAGC GGC GCCGTCAGGCAGATGAGCCGAGG GAGTTGAAATTGTGA TERM 58 110538 - 110518 - g 74 -5.3 -4.56597 | TGCTCTGGGCAAAAA GGAGGTACT GGG AGATCCTCC AGAAACAACCCGTTT Tneu_0124 109341 - 110594 + | transposase IS605 OrfB Tneu_0125 111605 - 112723 + | hypothetical protein Tneu_0126 113967 - 112720 - | hypothetical protein Tneu_0127 114773 - 113964 - | hypothetical protein TERM 59 114862 - 114915 + r 100 -15.1 -4.56775 | gap 1 GATCTAGCCCCCTAC CCGGGCCTCGCCGCGGCCTCACAGGC CCT GCTTG-GGGGCCGCAGCGCCGGCTGG TTTTTACCCCCGCCT Tneu_0128 115330 - 115049 - | hypothetical protein Tneu_0129 115394 - 116026 + | hypothetical protein Tneu_0130 116946 - 116023 - | pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit Tneu_0131 118820 - 116943 - | pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein TERM 60 117495 - 117532 + g 75 -8.4 -4.2074 | gap 2, overlap 117522 CAGCGGGTAGGCCTC GGCCTCGCTCGGCGCCGT GTAG ACGGCGG-GAG-GCGGCC TTTCTATCTTAACCG TERM 61 118433 - 118452 + g 73 -10 -3.66256 | gap 1, opp_overlap 118425, overlap 118431 TGACGAAGCCGCCTA CCGTCGGCT CGA AGCCG-CGG TCTTTTGCAAATCTC Tneu_0132 119524 - 118928 - | multiple antibiotic resistance (MarC)-related protein TERM 62 119114 - 119078 - G 85 -16.5 -3.21416 | GATGCCGAGGAGCAA GGTGGCCGCGACGGC GGTGGAG GCTGACGCGGCCACC GCCAGAGCCCAGAGG Tneu_0133 120778 - 119579 - | hypothetical protein TERM 63 119970 - 119948 - G 76 -9.1 -4.06678 | opp_overlap 119968, overlap 119964 ATCCACCGATATAAA CCGGGCC GGCATCAGA GGCCCGG CGTGGCTGCCGCGCA TERM 64 120316 - 120284 - G 72 -11.4 -3.36749 | gap 1 GACTTCGAAGATGAA GCCCTCGTGCATCGA GGGG TCGATG-ACGAGGCC GGCCGTGGTGAAGGG TERM 65 121749 - 121733 - g 81 -13.7 -3.35438 | CATCACAGTCCACAA CCACGGC TAC GCCGTGG ATCCAAAAGACAGCG Tneu_0134 120879 - 121937 + | carbamoyl-phosphate synthase, small subunit TERM 66 123881 - 123825 - g 76 -12.5 -3.30771 | gap 2, opp_overlap 123834 CCAGAGGCTTTATAA GCGTCT-T-GAGGCGGCGGGGGT GAAGATCGGGGGG ACCCGCGCCGCCTCTATAGACGC GGCGGAGGACAGGAG TERM 67 124984 - 124974 - g 75 -2.4 -4.91109 | GTGGTACTACAAAAA CGGG AAG CTCG AGGTAGCGCCGTGGT Tneu_0135 121924 - 125001 + | carbamoyl-phosphate synthase, large subunit TERM 68 125586 - 125572 - g 71 -7.8 -4.08216 | CCAGGGGGGGCAAAA CCCTCC CGC AGAGGG TAGACGGCGAGTTGG Tneu_0136 124995 - 125792 + | alpha-L-glutamate ligase Tneu_0137 126756 - 125776 - | AIR synthase-like protein TERM 69 127459 - 127440 - g 85 -5.6 -5.07107 | gap 1 GAAATTTTTAAAAAA CGCCCGCGC GAA GAGCGG-CG ATGGTAACTAGGAGG Tneu_0138 126811 - 127470 + | hypothetical protein TERM 70 127485 - 127505 + G 81 -13.9 -3.30159 | opp_overlap 127477 GGAGGAAGCTCCTAG CCGGCGCGG TAG CCGCGGCGG TTGTAGCCGCCTTGG Tneu_0139 127460 - 128584 + | extracellular solute-binding protein TERM 71 129205 - 129223 + G 79 -8 -4.56597 | ATACTACAGCATCCA GGAGGTGG GCA CCGCCGCC TTTTTGACAAGGGCG Tneu_0140 128840 - 129358 + | molybdenum cofactor synthesis domain-containing protein TERM 72 129393 - 129418 + G 88 -7.5 -4.88067 | opp_overlap 129359 ACACAGCAACCACGT GCCCGGCCT GGGGGAGA AGGCCAGGC TTTTTGTACATGCGT TERM 73 129840 - 129876 + G 73 -9.4 -3.90112 | GAAGGCGCTGGCGGA GGAGGTCTGCGGCG-CGG AAC CCGGCGCCTCA-ACCGCC TTTGGTTAACCAGAG Tneu_0141 129355 - 129885 + | hypothetical protein Tneu_0142 130500 - 129868 - | abortive infection protein TERM 74 130465 - 130479 + g 100 -10 -5.09173 | overlap 130434 CCTCCGTATCACGGC CGTTGC TAT GCAACG TTTTTTAACCTGTTG Tneu_0144 131568 - 130954 - | dTMP kinase Tneu_0143 130522 - 131004 + | hypothetical protein Tneu_0145 133037 - 131589 - | FAD dependent oxidoreductase TERM 75 131631 - 131661 + g 82 -11.1 -3.95073 | gap 2, overlap 131629 GGCGAGGATGCCTCT CGCCGCCAGCACGCC CGT GGCG-GC-GGCGACG TTTATGCCTCTGGAG Tneu_0146 133156 - 134154 + | adenylosuccinate synthase TERM 76 134517 - 134507 - g 77 -8.2 -4.41309 | overlap 134509 AAAGAAGAAGATAAA CGCC GCA GGCG AGGAGCTGGCGCGCC Tneu_0147 134151 - 135362 + | adenylosuccinate lyase Tneu_0148 135353 - 135928 + | imidazole glycerol phosphate synthase, glutamine amidotransferase subunit Tneu_0149 136348 - 135929 - | phosphoribosyl-AMP cyclohydrolase Tneu_0150 136372 - 137379 + | aminotransferase class I and II Tneu_0151 137418 - 138266 + | ATP phosphoribosyltransferase Tneu_0152 138563 - 138279 - | phosphoribosyl-ATP diphosphatase Tneu_0153 139669 - 138560 - | histidinol dehydrogenase Tneu_0154 140442 - 139666 - | imidazoleglycerol phosphate synthase, cyclase subunit TERM 77 139959 - 140005 + g 70 -12.8 -2.87132 | TCTTCGCCCACTCCA CGGCGTCTAGGCCCGTGGGGTC GCG GCCCCCCCGGACGTAGACCTCG TATCTACCGCCCACG Tneu_0155 140470 - 141033 + | imidazoleglycerol-phosphate dehydratase Tneu_0156 141030 - 141722 + | histidine biosynthesis protein Tneu_0157 143166 - 141712 - | hypothetical protein TERM 78 143252 - 143221 - H 72 -5.8 -4.5115 | gap 1, overlap 143224 143242 GAGAAAAACTTAAAA GAAGCCGCGGCGTTG AGA CAA-GCCGGGACTAC GCCGGCGAGGGCGGC Tneu_0158 143338 - 143781 + | hypothetical protein Tneu_0159 143821 - 145074 + | glutamyl-tRNA(Gln) amidotransferase, subunit D TERM 79 145497 - 145479 - g 73 -8.8 -3.85698 | GCTTGCCGGTATAAA CAGCTGGG CTA CCCAACCG ACGATCTAGCGAAGG Tneu_0160 145071 - 145601 + | metal dependent phosphohydrolase Tneu_0161 146122 - 145598 - | ZPR1-like zinc finger protein Tneu_0162 146168 - 146434 + | hypothetical protein Tneu_0163 146465 - 147028 + | hypothetical protein Tneu_0164 147741 - 147025 - | aspartate/glutamate/uridylate kinase TERM 80 147531 - 147546 + g 70 -4.6 -4.54449 | overlap 147533 TGACGTAGGAGGTGA GGCGCT TAAG AGCGGC TTTTGTGTAGGCTAT Tneu_0165 148745 - 147741 - | polyprenyl synthetase TERM 81 149016 - 149036 + G 70 -3.8 -4.66833 | GCCTCAAGGACGTGT CCGGCCGC TCGCT GAGGCAGG TTTTTGGAGTTGGGG Tneu_0166 148787 - 149524 + | hypothetical protein Tneu_0167 149548 - 149958 + | hypothetical protein TERM 82 150166 - 150123 - f 73 -12.4 -2.91274 | gap 1, overlap 150159 TCGATGTTAATGATA GCGGCGA-CGTCCCCACCCGC AGC GGGGGCGGAGACACTCACCAC CCACTCCGTGGGCAG Tneu_0169 150442 - 150774 + | hypothetical protein Tneu_0170 150775 - 151629 + | thiamine monophosphate kinase-like protein Tneu_0171 151643 - 152347 + | hypothetical protein Tneu_0172 153104 - 152433 - | ribose 5-phosphate isomerase Tneu_0173 153519 - 153127 - | signal-transduction protein TERM 83 154520 - 154510 - g 74 -5.4 -4.4874 | TTGAAAAATCGAAAA GTTG GTA CAAC TGCGGGGAGCCCTGC Tneu_0174 153594 - 155450 + | aldehyde ferredoxin oxidoreductase Tneu_0175 155787 - 155434 - | dinitrogenase iron-molybdenum cofactor biosynthesis protein Tneu_0176 155897 - 156424 + | pyruvate/ketoisovalerate oxidoreductase, gamma subunit Tneu_0177 156421 - 156732 + | pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit Tneu_0178 156729 - 157907 + | pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein Tneu_0179 157904 - 158863 + | thiamine pyrophosphate binding domain-containing protein Tneu_0180 158966 - 160846 + | hypothetical protein Tneu_0182 161350 - 161159 - | hypothetical protein Tneu_0181 160874 - 161218 + | hypothetical protein Tneu_0183 161865 - 163280 + | glycoside hydrolase family protein Tneu_0184 163463 - 164680 + | major facilitator transporter Tneu_0185 164718 - 165725 + | pyridoxal-5'-phosphate-dependent protein beta subunit Tneu_0186 166437 - 165706 - | hypothetical protein Tneu_0187 167232 - 166486 - | UBA/THIF-type NAD/FAD binding protein TERM 84 166827 - 166803 - G 72 -13.5 -2.52623 | overlap 166802 166800 CGCCGTGGACAAGAG GCCTCCCCCGT TTG ACGGAGGCGGC GTTAACCACGTGTCT TERM 85 167292 - 167274 - H 70 -5.2 -4.49311 | overlap 167287 167291 ACGAGGACGAGAAAA CCCCTCTT GAG AAGCGAGG CGCCCGCCGCCGGCG TERM 86 167373 - 167363 - H 77 -8.2 -4.19577 | opp_overlap 167362 167363 CAACGTGGAAAAGAA GCCC ATA GGGC ATTTCCCACGTCCAC Tneu_0188 167418 - 168101 + | glycerophosphoryl diester phosphodiesterase TERM 87 168455 - 168476 + G 71 -8.6 -4.1043 | CTTCGTCCCCTGGAT CGGCGCCG AACTCG CGGCGCAG TTTCTGATCTTTACA TERM 88 168979 - 169007 + G 77 -10.9 -3.57119 | overlap 168980 CCATGCGGAGCCCGC CCCCTCCGGCTAC TGG GTTGCTGGAGGGC TTTGCGCAGTCTCTC TERM 89 168980 - 169006 + G 77 -14.4 -2.7395 | overlap 168979 CATGCGGAGCCCGCC CCCTCCGGCTAC TGG GTTGCTGGAGGG CTTTGCGCAGTCTCT TERM 90 169018 - 169050 + G 86 -17.7 -2.71681 | AGGGCTTTGCGCAGT CTCTCGCCAGCGTCG CCC CGACGTCGGCGAGGG TGCTTGCGGCACTTG TERM 91 169514 - 169471 - g 78 -16 -2.62396 | gap 1, overlap 169495 TAGGGGCCTACATGA CGCAGGCCGCCCAGGCGGG TAACACG CCCGCGTTGGCGGCCT-CG GTGGCGGTGATGAGC Tneu_0189 168225 - 169601 + | binding-protein-dependent transport systems inner membrane component TERM 92 169796 - 169819 + G 76 -10.2 -3.75153 | opp_overlap 169788, overlap 169798 GAACCCATCAGGGAG CCTCGGCGCG AGAT CGCGCTGATG TTTCAGTTCCCCAAC TERM 93 169798 - 169817 + G 74 -11.4 -3.46068 | opp_overlap 169788, overlap 169796 ACCCATCAGGGAGCC TCGGCGCG AGAT CGCGCTGA TGTTTCAGTTCCCCA Tneu_0190 169589 - 170323 + | ABC transporter related Tneu_0191 170766 - 170320 - | hypothetical protein Tneu_0192 171150 - 170857 - | S1 IF1 family protein Tneu_0193 171217 - 171948 + | transposase IS605 OrfB TERM 94 172045 - 172021 - g 78 -4.2 -4.77173 | gap 1, overlap 172022 GGTGGACAAAATAAA GGCGTTGC-GC GGTA GCTACGACGCC GTGGTAGCGGCCGGC Tneu_0194 171971 - 172597 + | metallophosphoesterase Tneu_0195 173363 - 172584 - | hypothetical protein TERM 95 172849 - 172901 + g 79 -12.3 -3.54307 | gap 3 GTGGCTAACACGCCG TATACCTCCTCCA-CGTCTGTGTGCG CGGT CGC-CACC-ACGATGGAGGAGGTGTA TTTGGCAAAGATCTT TERM 96 173107 - 173095 - G 73 -4.7 -4.59853 | opp_overlap 173100 TTAAGCTTCGAAAAA CGCTC GTT GGGCG CCGCGAAGCCGTCCA Tneu_0196 173410 - 174303 + | radical SAM domain-containing protein TERM 97 174322 - 174309 - f 83 -9.5 -4.22927 | GGAGGAATAGACAAA GGCGG CGTT CCGCC CGTGGAAGAAAGGCA TERM 98 174365 - 174349 - f 93 -10.8 -4.58395 | GGCATTCCTTAAAAA CGGCGG GGGCT CCGCCG GCTATGAGGTGGATC TERM 99 174914 - 174886 - g 70 -3.9 -4.65916 | overlap 174888 GCGACCTCAACAAAA CAGCGGCT-CTGC TCTCC GCAATAGCCGC-G AGGCTAGAGAAGTAC Tneu_0197 174369 - 175343 + | hypothetical protein Tneu_0198 175375 - 176292 + | transcriptional regulator, TrmB TERM 100 176772 - 176795 + G 79 -12.4 -3.46813 | overlap 176776 ATATGGTTCTCTTCC CCAGGGCCAG GATA CTGACCCTGG TCTTCTTCGTGGTTA TERM 101 176937 - 176963 + G 78 -15.8 -2.62184 | overlap 176895 TCGCTCACATTGGCG GCTTCGTGGCGG GGG CCGCCACGGCGC TGGTGTACAGGCGGA Tneu_0199 176321 - 177019 + | rhomboid family protein Tneu_0201 177634 - 177374 - | ArsR family transcriptional regulator TERM 102 177915 - 177927 + G 70 -10.5 -3.54424 | ATCTAGCGCCGAGGC GGCCC GTT GGGCC TTTGCCAGGGTGGGG Tneu_0202 177847 - 178293 + | hypothetical protein Tneu_0203 178322 - 181159 + | leucyl-tRNA synthetase Tneu_0204 184839 - 181144 - | reverse gyrase TERM 103 185270 - 185248 - g 89 -9.8 -4.61527 | opp_overlap 185263, overlap 185238 185237 185249 AAAATCCCTCAAAAA CGAGGGCGAC TTC ATCGCCCTCC TAGAGGCGGTGATCC TERM 104 185269 - 185249 - g 81 -13.3 -3.35832 | opp_overlap 185263, overlap 185238 185237 185248 AAATCCCTCAAAAAC GAGGGCGAC TTC ATCGCCCTC CTAGAGGCGGTGATC Tneu_0205 184913 - 185305 + | hypothetical protein Tneu_0206 185834 - 185298 - | appr-1-p processing domain-containing protein TERM 105 185505 - 185520 + g 76 -6.8 -4.57569 | opp_overlap 185478 185516, overlap 185478 GAGGCCCAGCTCCTC CGCCTT AATA AGGGCG TTTTTAACGGCCTCG TERM 106 185972 - 185994 + H 76 -4.1 -4.92239 | gap 1, overlap 185972 GGGCTAAGCTACGGG CC-CCGTCAC AGAT GTGACAGCGG TTTTTAAGTTTTTCC Tneu_0207 186044 - 186448 + | hypothetical protein TERM 107 186482 - 186451 - T 73 -5.6 -4.61868 | opp_overlap 186455, overlap 186455 GACGCAGACATAAAA CCAACGCGGCCGGG GCCT CCAGGCGGCGTATG TACACAGGGCGGTTA TERM 108 186478 - 186455 - T 71 -9.4 -3.80768 | opp_overlap 186455, overlap 186451 CAGACATAAAACCAA CGCGGCCGGG GCCT CCAGGCGGCG TATGTACACAGGGCG TERM 109 186504 - 186531 + T 80 -14.8 -2.62184 | gap 1, opp_overlap 186489 186503 GGGCGGTTAGGACAG CGCCCCCGGG-GG ACC CCGCCCGTGGGCG TACTGTAGGGGACAC Tneu_0208 186943 - 186554 - | hypothetical protein Tneu_0209 188480 - 187077 - | H+transporting two-sector ATPase alpha/beta subunit central region TERM 110 188213 - 188245 + g 71 -7.8 -4.13767 | CGTCTAGAATCCTCC CGATGA-GCTCCTCAG ACA CTG-GGAGCTTCAGCG TTTTGCCGTAGAACC Tneu_0210 188526 - 189380 + | 6-phosphogluconate dehydrogenase NAD-binding Tneu_0211 189907 - 189635 - | hypothetical protein Tneu_0212 190614 - 189928 - | GCN5-related N-acetyltransferase TERM 111 190218 - 190234 + g 80 -15.1 -2.98823 | ACCTGCCGTTGCCCC CGGCGGG CCT CCCGCCG TATATGTAGAAGCGC TERM 112 190466 - 190446 - G 72 -12.5 -3.04144 | TCCCCACGGTCAATA GGGCGGCCA CTG CGGCCACCC GGCCGCTCCAGAGGG TERM 113 191345 - 191362 + G 95 -14.1 -4.07568 | opp_overlap 191310 191343 GGAGGTATAGATACG CCGCGGC CCAC GCCGCGG TTTTCAAAGCCGCGG Tneu_0213 190639 - 191406 + | tRNA-pseudouridine synthase I Tneu_0214 191436 - 192083 + | hypothetical protein Tneu_0215 192561 - 192088 - | hypothetical protein Tneu_0216 192603 - 193364 + | diphthine synthase Tneu_0217 193373 - 193900 + | hypothetical protein Tneu_0218 193942 - 194298 + | hypothetical protein Tneu_0219 195098 - 194295 - | putative circadian clock protein, KaiC TERM 114 194714 - 194733 + g 74 -11.4 -3.5365 | gap 1, overlap 194703 194714 AGGTGTCTATGGAGA GG-GCGGCG TAG CGCCGCACC TTGTCTGGGCTTTCC Tneu_0220 195143 - 195445 + | hypothetical protein Tneu_0221 196494 - 195520 - | hypothetical protein TERM 115 196290 - 196274 - G 75 -13.7 -2.96274 | opp_overlap 196284, overlap 196276 TTGGCGACAATTATA GACGCCG CCA CGGCGTC GCACCCCGCCGTCTT Tneu_0222 197545 - 196484 - | radical SAM domain-containing protein TERM 116 197705 - 197673 - H 71 -12 -2.80354 | gap 1, overlap 197672 CACAGCTAGCCAAAT CCCCCGCCACCGCCT TCAG AAACG-CGGCGGGGG CAAGCTCAAGTATTA Tneu_0223 198483 - 199577 + | radical SAM domain-containing protein TERM 117 199990 - 200013 + GT 78 -2.2 -5.09173 | overlap 199977 199995 GTCGGCGAGCTCTGG CAGACGCGGG TGGG CACGCCGCTG TTTTTTGCCGTCTTG Tneu_0225 200959 - 200222 - | ABC transporter related Tneu_0224 199555 - 200274 + | hypothetical protein Tneu_0226 202107 - 200956 - | ABC-2 type transporter Tneu_0227 202136 - 203263 + | hypothetical protein TERM 118 203519 - 203533 + T 83 -9.2 -4.65895 | opp_overlap 203499, overlap 203498 TTCCCCGGGGGGCTC GGGGCG CGC CGCCTC TTTTTAACTAGCGGG TERM 119 204293 - 204258 - T 75 -12.6 -2.88999 | gap 1, opp_overlap 204258, overlap 204260 CGGTGATAGATGAGA TACGAGGCGCCT-CTGC TTG GTAGCAGGCGCCGCGTA TTTATCTCCGCCGTG TERM 120 204258 - 204293 + T 100 -14.8 -4.0371 | gap 1, opp_overlap 204258 204260 CGGTGATAGATGAGA TACGAGGCGCCT-CTGC TTG GTAGCAGGCGCCGCGTA TTTATCTCCGCCGTG Tneu_0229 204901 - 204353 - | PaREP1 family protein Tneu_0230 205403 - 204966 - | PilT domain-containing protein TERM 121 205233 - 205244 + g 85 -3.6 -5.36441 | overlap 205216 GCCGCGTGTCAACTC GCCG CGTC TGGC TTTTTTATCTAGCGC Tneu_0231 205675 - 205400 - | hypothetical protein Tneu_0233 206408 - 207313 + | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding Tneu_0234 207330 - 207572 + | hypothetical protein Tneu_0235 209084 - 207645 - | 4-alpha-glucanotransferase Tneu_0236 209516 - 209085 - | hypothetical protein TERM 122 209288 - 209302 + g 75 -2.7 -4.98522 | CCAACCTCGCCCTCA CGGCG TCTCC CTCCG TTTTTATATCCCATT Tneu_0237 209574 - 210287 + | hypothetical protein Tneu_0238 211463 - 210258 - | phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase Tneu_0239 212331 - 211456 - | spermine synthase Tneu_0240 214069 - 212351 - | peptidase S9 prolyl oligopeptidase TERM 123 214178 - 214191 + H 79 -2.3 -5.252 | GAGGTGCCATCGTCG GCGCG GATA TGTGC TTTTTTGTGCGGCTA Tneu_0241 214249 - 214512 + | hypothetical protein Tneu_0242 214533 - 215138 + | peptidase M50 Tneu_0243 216338 - 215187 - | cystathionine gamma-lyase Tneu_0244 216569 - 217198 + | TrkA domain-containing protein Tneu_0245 217843 - 217247 - | ribonuclease HII Tneu_0246 217866 - 218054 + | hypothetical protein Tneu_0247 218502 - 218029 - | PadR-like family transcriptional regulator Tneu_0248 219307 - 218495 - | NAD+ synthetase Tneu_0249 220488 - 219310 - | acetyl-CoA acetyltransferase TERM 124 220417 - 220400 - G 73 -9.8 -3.60792 | opp_overlap 220394 220393 220393 TTCTTAATGGTGAAA GCCGCC AGGTGG GGCGGC TTCACGTCTTTAAAA Tneu_0250 220552 - 221676 + | hypothetical protein Tneu_0251 221673 - 222170 + | methyltransferase type 11 Tneu_0252 222193 - 223263 + | phospholipase D/transphosphatidylase Tneu_0253 223306 - 223419 + | hypothetical protein Tneu_0254 224269 - 223580 - | deoxyribose-phosphate aldolase Tneu_0255 224323 - 224610 + | acylphosphatase Tneu_0256 224908 - 224690 - | hypothetical protein Tneu_0257 225508 - 225254 - | hypothetical protein Tneu_0258 225803 - 225600 - | hypothetical protein Tneu_0259 225880 - 226731 + | lysine biosynthesis enzyme LysX Tneu_0260 227005 - 226706 - | zinc finger SWIM domain-containing protein Tneu_0261 227873 - 227022 - | initiation factor 2B related Tneu_0262 227899 - 228630 + | ABC transporter related Tneu_0263 228614 - 229489 + | ABC-3 protein Tneu_0264 229509 - 230660 + | hypothetical protein TERM 125 231204 - 231229 + G 74 -6.8 -4.3255 | gap 1, overlap 231204 CGTGGGGTTCATCGC GG-CGACGCCG CCGCT CGGCCTCGGCC TTTCTTCCTTCACCC Tneu_0265 230761 - 232026 + | general substrate transporter TERM 126 232913 - 232899 - g 79 -12.8 -3.54919 | opp_overlap 232905 AAGGATCGGGCTAAA CGGGGC GGC GCCCCG CCTAAGGGACAGGTG Tneu_0266 232084 - 233157 + | radical SAM domain-containing protein Tneu_0267 233376 - 234392 + | vitamin B6 biosynthesis protein Tneu_0268 234389 - 234997 + | SNO glutamine amidotransferase Tneu_0269 235093 - 235425 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Tneu_0271 235954 - 237162 + | hypothetical protein Tneu_0272 237675 - 237127 - | methyltransferase type 11 TERM 127 237232 - 237262 + g 72 -13.9 -2.64616 | opp_overlap 237220 ACAGCGGGAGGTGCA GCCGTGGCTCCCC ACGAG GGGGAGCCTCGCC TGATCTGCCTCCACC TERM 128 239151 - 239141 - g 71 -8.2 -4.11394 | overlap 239119 239142 AGCCTACGCCGAAAA CCGC GAA GCGG CCTACACGAAGACGC TERM 129 239345 - 239381 + G 70 -5 -4.57569 | gap 1, opp_overlap 239345 239347 239350, overlap 239348 ATCCAACGTTCCAAA CACCAGTGTCGCGGTCG TCAG CGGCCGCAACAG-GGAG TTTTTAGAGAGCTGG Tneu_0273 237720 - 239933 + | alpha,alpha-trehalose-phosphate synthase (UDP-forming) Tneu_0274 241268 - 240045 - | glycosyl transferase group 1 TERM 130 240110 - 240120 + g 91 -8.2 -4.78764 | overlap 240105 GTTTTAAAGCGTTGA GGCC CTC GGCC TTTTTCATAGCTTTG Tneu_0275 241858 - 241265 - | hypothetical protein Tneu_0276 241921 - 242139 + | hypothetical protein Tneu_0277 242153 - 243328 + | hypothetical protein TERM 131 243944 - 243910 - g 93 -8.5 -4.96848 | TTGGGGAGAGAAAAA CCGGCACATGTAGCC ACTTG GGCTACACGGGCGAG TACATAGAAACGACG Tneu_0278 243531 - 244199 + | hypothetical protein Tneu_0279 244397 - 244954 + | PaREP1 family protein Tneu_0280 246336 - 245515 - | paREP1 TERM 132 246455 - 246429 - g 72 -12.2 -3.09492 | GGGGGAAGGGGAAGA CCACCGCGGCGC TTG GCACCGCGCTGA GGGCGTGGGGCCACG Tneu_0281 246392 - 246853 + | ATP:corrinoid adenosyltransferase BtuR/CobO/CobP Tneu_0282 247694 - 246804 - | cobalamin biosynthesis protein CbiB TERM 133 246891 - 246864 - G 74 -12.6 -3.23216 | GGTGAGGAGGACGAA GGCCGCCGCAGC CCTA GCCACGGCGGAC AGCCCCCGCGCCACG Tneu_0283 248298 - 247714 - | hypothetical protein Tneu_0284 249379 - 248270 - | ABC transporter related TERM 134 249023 - 248996 - GR 90 -17.8 -3.14132 | gap 1 GGCTGGGTCGAGGAA GGCGGTGG-GCTC GTC GAGCACCACCGCC CCGGCCCGGGAAAGC Tneu_0285 249882 - 249376 - | hypothetical protein TERM 135 249622 - 249607 - G 73 -10.4 -3.57119 | opp_overlap 249612, overlap 249598 249610 CAGATACCTCCTAAA GAGGGC GGCG GCCCTC CCGGCGTTTTCCTCA Tneu_0286 250348 - 249869 - | thiW protein Tneu_0287 251441 - 250731 - | uroporphyrinogen III synthase HEM4 Tneu_0288 252494 - 251634 - | hypothetical protein TERM 136 252404 - 252378 - G 74 -12.2 -3.21416 | TACGGCGATGATGAA GGCGGCGGCG GGGGTAG CGCCGCCGGC TCTGACGACGGCCAC Tneu_0289 253165 - 252515 - | cobalamin 5'-phosphate synthase TERM 137 252710 - 252686 - G 74 -12.7 -3.15544 | overlap 252645 GGCGAGCGCTAGCAA CGCCCCCGGCC ACT GGCGGCGGGCG GCCGCGATAAACAGC Tneu_0290 254058 - 253144 - | aminotransferase class I and II Tneu_0291 255014 - 254055 - | cobalamin (vitamin B12) biosynthesis CbiG protein TERM 138 254340 - 254352 + g 70 -3.3 -4.59853 | overlap 254341 CAAGCCCACGCCCAC CGCCT CCA AGGCC TTTTTAACAGCTTCC Tneu_0292 255616 - 255008 - | hypothetical protein Tneu_0293 255825 - 255607 - | hypothetical protein Tneu_0295 257426 - 256437 - | nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase TERM 139 256520 - 256542 + g 77 -14.8 -2.73364 | overlap 256507 ACTCGGCGCGCCAGA GGGCGTAGCC CAT GGCGACGCCC TCCTTGACGTAGCCC TERM 140 256751 - 256738 - G 73 -9.5 -3.85817 | overlap 256739 AGCGCCTTGTACAAA GCCGC GGCG GCGGC CATCTGCGTGCCGCC TERM 141 257687 - 257671 - g 76 -8.7 -4.0641 | opp_overlap 257656 GGTTAGGGAGATAAA CGACGAC GTC GTCATCG CCTTGGCCTTCCTAG Tneu_0296 257507 - 258439 + | cobalamin (vitamin B12) biosynthesis CbiX protein Tneu_0297 258436 - 259173 + | precorrin-3B C17-methyltransferase TERM 142 259226 - 259188 - g 89 -15.8 -3.29043 | AACGCTTCGGGATAA CCACGGGCGCGGCGGCCG CCG CGGCCGCCAAGGCGGCGG CTCTGCACTGGAGGG Tneu_0298 259160 - 260185 + | cobalamin biosynthesis protein CbiD Tneu_0299 260182 - 260751 + | precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit TERM 143 261243 - 261227 - g 79 -8.7 -4.21439 | GAAGGCGAATAGAAA CGTCGAC CTG GTCAACG AGCTGGCGGCTGGGA Tneu_0300 260742 - 261365 + | uroporphyrin-III C/tetrapyrrole methyltransferase Tneu_0301 261350 - 262132 + | precorrin-4 C11-methyltransferase TERM 144 262642 - 262628 - g 76 -7 -4.57837 | overlap 262630 AGAGGCGGTGAAAAA GGCGGC GGG GCCCCC CGACCTGGACCAAGA Tneu_0302 262119 - 263099 + | hypothetical protein Tneu_0303 263327 - 263085 - | hypothetical protein Tneu_0304 263966 - 263388 - | hypothetical protein TERM 145 264310 - 264333 + r 86 -11 -4.18401 | opp_overlap 264302, overlap 264312 CAGAAACGTCAGCGG TGGCCGCCTG GGGG TAGGCGGCTA TTTTAGGGTGTCTAG TERM 146 264312 - 264331 + r 77 -11.4 -3.6878 | opp_overlap 264302, overlap 264310 GAAACGTCAGCGGTG GCCGCCTG GGGG TAGGCGGC TATTTTAGGGTGTCT Tneu_0305 265065 - 264331 - | zinc/iron permease TERM 147 265057 - 265045 - G 71 -7.7 -4.08948 | CAAGGCGATAAACAA GCTGT TAA ACAGC ACCTCCACAGAGATT Tneu_0306 266545 - 265115 - | hypothetical protein Tneu_0307 267425 - 266568 - | band 7 protein Tneu_0308 268604 - 267444 - | hypothetical protein TERM 148 268128 - 268143 + g 71 -7.5 -4.25859 | overlap 268125 CGCGGCCACCGCCTC GGCGC CGGTAA GCGCC TTGTTTTCCGTTACG TERM 149 269101 - 269048 - g 75 -7.9 -4.15044 | gap 1 CCCCTCCCCAAGAAA CACGG-CGCCCCGGCGCGCCTCGTGG TGC CCACGCGCTACGCCTGGAAATCCGTG AAGTACTTCGCCGCG Tneu_0309 268643 - 269251 + | oxidoreductase molybdopterin binding Tneu_0310 269368 - 269607 + | hypothetical protein Tneu_0311 269836 - 269561 - | hypothetical protein TERM 150 269654 - 269621 - G 95 -12.3 -4.16301 | AAGCCACATAAACAA GGCGGCGCCCGCCGC CAGC GCCACAGACGCCACC ACCGCCACCGCCAGC TERM 151 269747 - 269716 - G 93 -7.9 -5.05116 | gap 1, overlap 269717 269720 GCACAAAGAACAAAA CCACGCAGGCGGCG CCCGC CGCCTCC-ACGCGG CTAGGCCACCCCATA TERM 152 269744 - 269717 - G 77 -11.2 -3.61443 | overlap 269716 269720 CACAAAGAACAAAAC CACGCAGGCGGC GCCC GCCGCCTCCACG CGGCTAGGCCACCCC Tneu_0312 271193 - 270426 - | hypothetical protein Tneu_0313 272014 - 271166 - | 2-dehydropantoate 2-reductase Tneu_0314 272043 - 272828 + | 3-methyl-2-oxobutanoate hydroxymethyltransferase Tneu_0315 272825 - 273583 + | hypothetical protein TERM 153 273580 - 273564 - T 90 -5.1 -5.36965 | overlap 273576 CAAGACTAGAAAAAA TAGCCTC AGA GATGCTA TAGGCCACCCTCAGC Tneu_0316 274795 - 273950 - | hypothetical protein Tneu_0317 275307 - 275104 - | paREP6 Tneu_0318 275801 - 275247 - | hypothetical protein TERM 154 275457 - 275481 + gr 73 -9.9 -3.58726 | opp_overlap 275456 GTTGAGGTTTAATAC CTGCGGCGC AAAGTAG GCGCCGCCG TTCTCTGTAAGCACA Tneu_0319 276016 - 275801 - | paREP6 Tneu_0320 277635 - 276001 - | 2-isopropylmalate synthase/homocitrate synthase family protein TERM 155 277057 - 277072 + g 84 -11.8 -4.03234 | TCTGTACACCTCATG CGGCGG GGTG CCGCCG TTTGTGTCGGCGAGG Tneu_0321 278765 - 277662 - | cytochrome oxidase,subunit I TERM 156 277740 - 277713 - G 72 -12 -3.3095 | ATATAGGGCGTAGAA GGCGGCAGTGGT GAAC ACCACTATCGCC AGAACTAGAAAAGCC Tneu_0322 280354 - 278762 - | cytochrome bd ubiquinol oxidase subunit I Tneu_0323 280809 - 281240 + | carbon monoxide dehydrogenase subunit G TERM 157 281484 - 281518 + G 71 -7.7 -4.11216 | gap 1, overlap 281508 281516 CTGGAGAAGTACGGC GCGGCGAGGG-GCGGC GTTA GGAGCTCCCTCGCGGC TTTTGCGGCTAGGGC Tneu_0324 281271 - 282191 + | hypothetical protein Tneu_0325 282191 - 282466 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Tneu_0326 282471 - 283535 + | radical SAM domain-containing protein Tneu_0327 284324 - 283563 - | paREP7 TERM 158 284766 - 284755 - R 71 -7.2 -4.07568 | opp_overlap 284753 284751 284755 CGCCGCCGGCCAAAA CCCC AACT GGGG TATCTTGCTGTGGGG Tneu_0328 285147 - 284824 - | ArsR family transcriptional regulator Tneu_0329 285713 - 285144 - | hypothetical protein Tneu_0330 285805 - 286572 + | ABC transporter related Tneu_0331 286575 - 287423 + | hypothetical protein Tneu_0332 288750 - 287509 - | hypothetical protein TERM 159 288825 - 288806 - H 70 -10.8 -3.36202 | AGATATAGCGGAGAA CTGTTTCC TATA GGAAACAG AACACGCCGATGTGT TERM 160 288893 - 288922 + H 75 -5.8 -4.60797 | gap 3 CTCACCTTAGGCGTT CGCCAGGACGAGGCT GAG AGCC--GTCC-GGCG TTTTCTGTATCACCC TERM 161 288969 - 288993 + H 70 -10 -3.53012 | gap 1 CGAGCGTCTTCCACA GCCGCCGTCTC GCGT GAGGCG-CGGC TTTAAGGGGGGCGCC TERM 162 289043 - 289058 + H 72 -4 -4.82901 | overlap 289044 CTTTGCGGCCCCCTT TTTAGC CTAG GCTAAG TTTTTATAGGGAGGA TERM 163 289423 - 289443 + G 74 -12.5 -3.15663 | overlap 289410 289437 289442 CTGGGCCTCGGCTTC GCCGAGGCG GCC CTCCTCGGC TTCGTAGACGTGGCT Tneu_0333 289087 - 290208 + | natural resistance-associated macrophage protein TERM 164 290356 - 290341 - T 75 -6 -4.60487 | overlap 290343 GATCAGCTTGAAAAA CTCGGC GAGA GCCGCG TGGACCCTATTCATC Tneu_0335 290591 - 290400 - | iron dependent repressor Tneu_0336 291265 - 290609 - | uroporphyrin-III C/tetrapyrrole methyltransferase TERM 165 291014 - 291026 + g 73 -4.7 -4.59773 | opp_overlap 291014 CCCCCTCCCAAATAT CGTCG GAT CGCCG TTTTTCAAAATCACC Tneu_0337 292593 - 291250 - | cobyrinic acid a,c-diamide synthase TERM 166 292987 - 293004 + G 72 -2.7 -4.81249 | CTAATGAATAAGAGA CTATGGT TTTT ATCATGG TTTTTCCATTTCGGA Tneu_0338 292702 - 293610 + | nitrate reductase gamma subunit Tneu_0339 293607 - 295211 + | hypothetical protein Tneu_0340 295810 - 295208 - | hypothetical protein TERM 167 295598 - 295609 + g 78 -3 -5.1287 | opp_overlap 295590 TAACAACCCGCCAAC TGTT GTCG AACA TTTTTTACCTCTCCC Tneu_0341 297317 - 295902 - | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Tneu_0342 298376 - 297369 - | radical SAM domain-containing protein TERM 168 298254 - 298242 - G 75 -7.7 -4.1552 | TACCTCGGCAAGAAA CCTCT TGT AGAGG TCAAAATCCATGAGC Tneu_0343 298460 - 299230 + | nitrate reductase gamma subunit TERM 169 299442 - 299431 - g 85 -7.2 -4.83615 | TAGTCGCTAGAAAAA GCCC GTGG GGGC CTAGCGCGGTAAAGG Tneu_0344 299268 - 300506 + | sulfite reductase, dissimilatory-type alpha subunit TERM 170 300671 - 300659 - g 73 -10.5 -3.57144 | GTGTTCACCGTGAAA GCGGC TCT GCCGC CTAACGCCAGAGTTA Tneu_0345 300503 - 301639 + | sulfite reductase, dissimilatory-type beta subunit Tneu_0346 301629 - 302024 + | hypothetical protein Tneu_0347 302062 - 302397 + | TusE/DsrC/DsvC family sulfur relay protein TERM 171 302654 - 302665 + G 80 -3.6 -5.01546 | TGGGCGTTGTGGCTA GGGC TGGC GCTC TTTTTCTATGCGTTT Tneu_0348 302585 - 303988 + | hypothetical protein TERM 172 304073 - 304061 - f 73 -5.5 -4.67651 | ATACGTTAAAAGAAA CTAGC TAT GCCAG AAGTAAAAGGCCCGT Tneu_0349 304067 - 304720 + | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen TERM 173 304742 - 304754 + T 70 -2.7 -4.73448 | ACTTCACGACTATAG GAAGA GTT TTTTC TTTTTAAGTCTCTGT Tneu_0350 305279 - 304827 - | hypothetical protein Tneu_0351 305865 - 305299 - | hypothetical protein Tneu_0352 306411 - 305884 - | hypothetical protein Tneu_0353 306582 - 308999 + | molybdopterin oxidoreductase Tneu_0354 308996 - 309661 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Tneu_0355 309695 - 310402 + | formate dehydrogenase, cytochrome b556 subunit (formate dehydrogenase gamma subunit) TERM 174 310436 - 310454 + F 100 -16 -3.96327 | opp_overlap 310433, overlap 310448 AGTTTTAATAACGTG CCCCGCCT TTT AGGCGGGG TTTCTCCTCACGCCT Tneu_0356 310781 - 311521 + | CRISPR-associated Cas family protein Tneu_0357 311686 - 312045 + | aspartate 1-decarboxylase TERM 175 312308 - 312351 + G 79 -12.2 -3.44051 | GTACGGGAGAGGCCA CGCCGAGGAGCTCGTCGGCG TGGC CGCCGGGGGGCTAGCCGGCG TTGTAATCATCACGA Tneu_0358 312129 - 312953 + | aldo/keto reductase TERM 176 312977 - 312990 + F 70 -9.5 -3.44051 | ACCGCATCCTTTTTC CGCGG TGGT CCGCG TTGTAGTGGTGGGCG Tneu_0359 312981 - 313922 + | FAD-dependent pyridine nucleotide-disulphide oxidoreductase Tneu_0360 313992 - 315698 + | small GTP-binding protein Tneu_0361 316502 - 315663 - | hypothetical protein Tneu_0362 316813 - 318093 + | phosphate ABC transporter, periplasmic phosphate-binding protein Tneu_0363 318090 - 318968 + | phosphate ABC transporter, inner membrane subunit PstC Tneu_0364 318965 - 319843 + | binding-protein-dependent transport systems inner membrane component TERM 177 319860 - 319848 - f 91 -6.9 -5.47431 | overlap 319852 CGAAGAGATAAAAAA CGGAG CGC CCCCG GCGTGTGCAGATCTT Tneu_0365 319865 - 320419 + | hypothetical protein Tneu_0366 320503 - 321051 + | carbonic anhydrase TERM 178 321437 - 321451 + G 74 -11.4 -3.51825 | CTAGATGGCGGGACC GACCCC AGG GGGGTC TTCTACTTCGCCTGC Tneu_0367 321224 - 322549 + | hypothetical protein Tneu_0368 323489 - 322581 - | nucleoside recognition domain-containing protein Tneu_0369 324235 - 323471 - | methyltransferase type 12 Tneu_0370 325122 - 324226 - | nucleoside recognition domain-containing protein Tneu_0371 325876 - 325115 - | ABC transporter related Tneu_0372 326909 - 325869 - | transport system permease protein Tneu_0373 329071 - 326900 - | periplasmic binding protein TERM 179 328987 - 328999 + g 80 -10.5 -4.09685 | overlap 328986 CGTTGGAGACGCCGC CCCCC GTG GGGGG TTTTGCCAGATAGAG TERM 180 329294 - 329307 + H 72 -2.3 -5.00616 | overlap 329281 TCCGACGCGGCCGCC TCTGC CCAC GCCGA TTTTTTAAAGGAGAG TERM 181 333143 - 333131 - g 70 -3.3 -4.65916 | opp_overlap 333132, overlap 333132 TGTAGGCCAAGAAAA GGCCA AGC TGGCT CTGCTGGCGGTCTCG Tneu_0375 333069 - 334982 + | magnesium chelatase TERM 182 336432 - 336414 - g 81 -5.9 -4.86001 | overlap 336416 ACGAGGTTATAAAAA CGTGGGG CGAGC CCCCAGG CGGTATAAACGTAGA TERM 183 337934 - 337921 - g 70 -3.8 -4.59773 | CTCTAGTTGGAAAAA CGAG GGGGAG CTCG TCGAGGTGTACGTGG Tneu_0376 334979 - 338542 + | cobaltochelatase TERM 184 338598 - 338635 + G 80 -10 -4.07568 | gap 2, opp_overlap 338608 338631 AATAATTTCCCTATT GGTGGTAATACTGGCGGC TATT GCCG-CAGTA-TACCTCC TTTTGCCAAAGGGGC Tneu_0377 338572 - 340620 + | periplasmic binding protein TERM 185 340613 - 340636 + F 76 -6.6 -4.62069 | overlap 340622 CCTACACACAGGTCT GGGGGTAACG GGTT CTTAACCCCC TTTTTCGCCTCCGCC Tneu_0378 340733 - 342553 + | anaerobic ribonucleoside-triphosphate reductase Tneu_0379 342553 - 343272 + | anaerobic ribonucleoside-triphosphate reductase activating protein Tneu_0380 343303 - 343935 + | hypothetical protein Tneu_0382 344696 - 345715 + | hypothetical protein Tneu_0383 345933 - 348110 + | hypothetical protein Tneu_0384 348323 - 348595 + | hypothetical protein Tneu_0385 349318 - 351036 + | AMP-dependent synthetase and ligase Tneu_0386 351061 - 351540 + | hypothetical protein Tneu_0387 351561 - 352286 + | hypothetical protein TERM 186 352412 - 352383 - g 83 -16.3 -3.02144 | CTATCTCTCCCAACA GCCGGGGGCGCCG ACCG CCGCTCCCCCGGC TCAAACCACGGCCCC Tneu_0388 352309 - 353499 + | periplasmic binding protein Tneu_0389 353487 - 354503 + | transport system permease protein TERM 187 354726 - 354760 + G 72 -11.2 -3.31792 | GACGGTGGGCTACGT CCCGCAGAGGGCCGCC CCA GGAGGCCGGCTGAGGG TTATCGACCTGGTGG Tneu_0390 354490 - 355242 + | ABC transporter related Tneu_0391 355315 - 355923 + | cobalamin (vitamin B12) biosynthesis CbiM protein Tneu_0392 355920 - 356231 + | hypothetical protein TERM 188 356346 - 356358 + G 73 -4.7 -4.59773 | overlap 356333 356350 CTCCCCCTCGGTCCA CACCG CCG CGGCG TTTTTCGCCCTGGGC Tneu_0393 356212 - 356796 + | hypothetical protein TERM 189 357158 - 357139 - g 70 -10.7 -3.56092 | overlap 357109 357106 CGAGGAGGCGGCAAA GGCCCTC GGCATA GAGGGCC TCCTAGATAGGCCTC Tneu_0394 356777 - 357448 + | ABC transporter related Tneu_0395 357736 - 357440 - | hypothetical protein TERM 190 357734 - 357724 - G 71 -8.2 -4.07568 | opp_overlap 357723 357721 357724 CCTTCTGGGCTAAAA GGCG GAG CGCC ATGTTTTTACATCGG Tneu_0396 358427 - 357741 - | hypothetical protein Tneu_0397 360675 - 358429 - | (NiFe) hydrogenase maturation protein HypF TERM 191 359856 - 359894 + g 70 -12.3 -2.91264 | gap 1 GCGACGTGAGTAGCT CCGC-GGCCGCCCCGTCG ACCA CGACGAGCCGCCCCGCGG TCTCTAGGTCGAGCG Tneu_0398 361015 - 360668 - | hypothetical protein Tneu_0399 362231 - 361017 - | hydrogenase formation HypD protein Tneu_0400 362890 - 362318 - | beta-lactamase fold-like Zn-dependent hydrolase Tneu_0401 363984 - 362884 - | hydrogenase expression/formation protein HypE Tneu_0402 363985 - 364452 + | hypothetical protein Tneu_0403 364439 - 365077 + | hypothetical protein Tneu_0404 365049 - 366365 + | nickel-dependent hydrogenase small subunit Tneu_0405 366362 - 367135 + | hypothetical protein Tneu_0406 367185 - 368480 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein TERM 192 369319 - 369341 + G 100 -17 -4.07568 | opp_overlap 369304 369311 GGCAAGACCCACGAC CCGCCGGTGA TGC TCGCCGGCGG TTTTGCAGACGACCC Tneu_0407 368542 - 370458 + | nickel-dependent hydrogenase large subunit Tneu_0408 370458 - 370973 + | hydrogenase maturation protease Tneu_0409 370960 - 371217 + | hypothetical protein Tneu_0410 371214 - 371531 + | hypothetical protein TERM 193 371718 - 371663 - g 76 -8.9 -4.08767 | gap 1, opp_overlap 371669 GCGAGGCCTCTAAAA CGCC-TGTGGCCTCCCTCGTGGTCAT CGTCT ACGACCACGAGGTGGGGGACGTGGCG AAGCACTTGACTGAG Tneu_0411 371524 - 371922 + | CopG family transcriptional regulator Tneu_0412 371952 - 372362 + | hydrogenase expression/synthesis HypA Tneu_0413 372359 - 373084 + | hypothetical protein Tneu_0414 373081 - 373668 + | hypothetical protein TERM 194 374106 - 374094 - g 73 -4.8 -4.58663 | AGGACGTGTTAAAAA GCCT GGTTG AGGC CGCGGAGCCCGTGGA Tneu_0415 373706 - 374143 + | signal-transduction protein Tneu_0416 374532 - 374140 - | signal-transduction protein TERM 195 374389 - 374421 + g 72 -12 -3.29142 | overlap 374377 374387 374386 CCCCACCGGCTTCTT GGTGTTCTGGGGGT TCACC ACCACCAGAGCGCC TATGTTGTTCGTCGC Tneu_0417 374927 - 374508 - | signal transduction protein Tneu_0418 376341 - 374956 - | phosphoenolpyruvate carboxylase TERM 196 377346 - 377323 - g 82 -9.5 -4.36914 | CGGTTGGCCACAAAA CCCCCCTGG GCCTCG CCAGGGTGG TGCGTGGGGGGATCC Tneu_0419 376455 - 377543 + | alcohol dehydrogenase TERM 197 377544 - 377568 + T 76 -6.9 -4.56775 | opp_overlap 377524, overlap 377545 CTAGTCGTACCCTAA CGGCCGGCCCC CAT GGGGCCTACCC TTTTTAACAGCCGCT TERM 198 377545 - 377567 + T 70 -10.4 -3.33744 | opp_overlap 377524, overlap 377544 TAGTCGTACCCTAAC GGCCGGCCCC CAT GGGGCCTACC CTTTTTAACAGCCGC Tneu_0420 379538 - 377649 - | AMP-dependent synthetase and ligase TERM 199 377957 - 378012 + g 73 -9.7 -3.90318 | gap 1, overlap 377916 CTTCGGCTACGGCGG GGTGGCTGGTGAGTATGTCCTCCACC TCCCT GGTGGAGAGCCTG-TGGCCGGCCACC TTTATCACGTCGTCG Tneu_0421 380949 - 379540 - | aldehyde dehydrogenase TERM 200 381139 - 381122 - g 70 -4.1 -4.66537 | CTCCGCAACAGAAAA CACGTCA AGGT TTACGTG ATGGGGAAGAGGGTT Tneu_0422 381071 - 382564 + | vinylacetyl-CoA Delta-isomerase TERM 201 382703 - 382735 + G 86 -14.7 -3.28791 | overlap 382704 GCTTGAGGGCCGCGG TGGCCGCCGCCGCCC GGG GGGCCTCGGTGGCCG TTGTCACCAAGACCT TERM 202 382704 - 382734 + G 78 -16 -2.57132 | overlap 382703 CTTGAGGGCCGCGGT GGCCGCCGCCGCCC GGG GGGCCTCGGTGGCC GTTGTCACCAAGACC Tneu_0423 382639 - 384366 + | succinate dehydrogenase or fumarate reductase, flavoprotein subunit Tneu_0424 384366 - 384668 + | ferredoxin TERM 203 385504 - 385518 + GT 74 -12.8 -2.87132 | opp_overlap 385498 ACGAGTACATGGAGA CGGCGG CGC CCGCCG TCTATGCCGCAGGCG Tneu_0426 386456 - 385959 - | hypothetical protein Tneu_0425 384711 - 386039 + | FAD-dependent pyridine nucleotide-disulphide oxidoreductase TERM 204 386772 - 386740 - g 86 -13.3 -3.48276 | opp_overlap 386742 TGCGCCTGGATAGAA GACGACGGGGCCCTC GGC GCGGTCCCCCTCGTC CTATGCCGCGTGAGA Tneu_0427 386515 - 386979 + | hypothetical protein Tneu_0428 387151 - 386930 - | hypothetical protein TERM 205 387806 - 387816 + G 77 -8.2 -4.33258 | CGCTGGCTACGCTCA GGCC TAA GGCC TTTGTATTTGAAAAT Tneu_0429 387433 - 388821 + | DNA-cytosine methyltransferase Tneu_0430 389891 - 388818 - | hypothetical protein Tneu_0431 390573 - 391250 + | HhH-GPD family protein Tneu_0432 391273 - 392250 + | hypothetical protein TERM 206 392676 - 392642 - f 79 -10 -4.13767 | opp_overlap 392645 392647 GGCTCTAGGCTAAAA CTTTATACCTCCCTAG TTA CTAGGGAGGTATGTTG TTTAGGGAGGGGCCT TERM 207 392645 - 392673 + F 100 -16.9 -3.90744 | opp_overlap 392642, overlap 392647 TCTAGGCTAAAACTT TATACCTCCCTAG TTA CTAGGGAGGTATG TTGTTTAGGGAGGGG TERM 208 392647 - 392671 + F 100 -17.3 -3.54488 | opp_overlap 392642, overlap 392645 TAGGCTAAAACTTTA TACCTCCCTAG TTA CTAGGGAGGTA TGTTGTTTAGGGAGG TERM 209 393487 - 393501 + G 72 -11.4 -3.35774 | opp_overlap 393477 GAGAAGGCGGCGCGT CTCGCC TGG GGCGAG TTCTGCAGATTTGTG Tneu_0433 392671 - 393750 + | ATPase Tneu_0434 394213 - 393782 - | hypothetical protein Tneu_0435 394268 - 394456 + | hypothetical protein Tneu_0436 394538 - 394972 + | hypothetical protein Tneu_0437 395092 - 396174 + | hypothetical protein Tneu_0438 396171 - 396602 + | hypothetical protein Tneu_0439 398117 - 396813 - | hypothetical protein TERM 210 398253 - 398237 - H 72 -9.5 -3.69447 | opp_overlap 398252, overlap 398235 398249 398252 CCACCAAAAAATATA GATGGTT TAA AACCATC CCCGCCCTGATGGGC TERM 211 398276 - 398249 - H 91 -12.6 -4.10925 | opp_overlap 398252 398253, overlap 398237 398235 398252 ATAGATGGTTTAAAA CCATCCCCGCCC TGAT GGGCGGGGCTTG TTGTTTGCGTTGTCA TERM 212 398273 - 398252 - H 75 -12.9 -3.08508 | opp_overlap 398252 398253, overlap 398237 398235 398249 GATGGTTTAAAACCA TCCCCGCCC TGAT GGGCGGGGC TTGTTGTTTGCGTTG TERM 213 398252 - 398273 + H 91 -12.9 -4.1235 | opp_overlap 398237 398235 398249 398252, overlap 398253 GATGGTTTAAAACCA TCCCCGCCC TGAT GGGCGGGGC TTGTTGTTTGCGTTG TERM 214 398253 - 398272 + H 88 -16.4 -3.06326 | opp_overlap 398235 398252 398249, overlap 398252 ATGGTTTAAAACCAT CCCCGCCC TGAT GGGCGGGG CTTGTTGTTTGCGTT Tneu_0440 398412 - 398840 + | hypothetical protein Tneu_0441 399772 - 399317 - | PilT domain-containing protein Tneu_0442 400007 - 399744 - | transcriptional regulator/antitoxin, MazE TERM 215 400305 - 400346 + H 79 -8 -4.371 | gap 1, overlap 400308 400309 CTTTCATGACTGCAG CCCA-GTTGCGCCGCCGTA TTTCT TACGCCGGCGTAGCGTTGG TTTTGGTGTCGTACC TERM 216 400309 - 400341 + H 71 -12 -2.83592 | overlap 400308 400305 CATGACTGCAGCCCA GTTGCGCCGCCGTA TTTCT TACGCCGGCGTAGC GTTGGTTTTGGTGTC TERM 217 401202 - 401222 + G 70 -12.5 -2.87132 | TCGTTTGGCTCCTCT CCAACGGCC TGG GGCCGCTGG TGTATCCAGGCGCCG TERM 218 401515 - 401497 - g 75 -13.8 -2.87564 | GGAGGCGCTGAGAGA CGCCGCCC GCG AGGCGGCG CAACTGGAGAAGACC Tneu_0443 400412 - 401866 + | CRISPR-associated DxTHG family protein Tneu_0445 403606 - 402938 - | CRISPR-associated APE2256 family protein Tneu_0446 403679 - 404482 + | beta-lactamase domain-containing protein Tneu_0447 404501 - 405043 + | hypothetical protein Tneu_0448 405096 - 406862 + | carbon starvation protein CstA Tneu_0449 406885 - 407133 + | hypothetical protein TERM 219 407290 - 407304 + G 72 -11.4 -3.34398 | overlap 407288 GCACGGATCCTCAGG CGTCGC TGA GCGACG TGTTTGAGCAGAACG Tneu_0450 407130 - 408134 + | arsenite-transporting ATPase Tneu_0451 408131 - 409111 + | arsenite-transporting ATPase Tneu_0452 409108 - 409362 + | hypothetical protein Tneu_0453 409352 - 409783 + | hypothetical protein Tneu_0454 409774 - 410076 + | hypothetical protein TERM 220 410176 - 410188 + G 71 -6.9 -4.26076 | overlap 410177 CTCGTGGGGCTGAGG TGGGG GGT CCCCG TTTTCCTCCCCCTGG Tneu_0455 410101 - 410988 + | AAA ATPase TERM 221 411051 - 411072 + F 76 -7.1 -4.64844 | opp_overlap 411043, overlap 411053 CACATAATCCAGCCA GTCCGCGGG AATT CCGGCGGCC TTTTCTATATATGCG Tneu_0456 411146 - 412441 + | glutamine synthetase catalytic region Tneu_0457 412441 - 413103 + | glutamine amidotransferase-like protein Tneu_0458 413233 - 414618 + | ferredoxin-dependent glutamate synthase Tneu_0459 415702 - 414578 - | glycosyl transferase group 1 Tneu_0460 416958 - 415699 - | hypothetical protein TERM 222 416531 - 416492 - G 74 -12.1 -3.24708 | gap 2, overlap 416490 416488 TAGTTGGTAAAGATA GAGGGC-GCCAG-CGCGGC GACG GCGGCGGCCGGCCGCCCCC TGGCGTAGAGGTAGA TERM 223 416677 - 416657 - G 72 -13.9 -2.50291 | overlap 416656 AACGATGCGAGGAAC GGCGCCGGG ACC CCCGCCGCC TTGAAGTAGAGCCCG Tneu_0461 416969 - 417496 + | hypothetical protein Tneu_0462 418628 - 417462 - | glycosyl transferase family protein TERM 224 417666 - 417641 - G 71 -8.9 -3.79995 | overlap 417662 417663 TGAAGGACAAGACAA GCCCCCTCCCC ACGT GGAGAAGCGGC GTCTCCGCCTCGCTC Tneu_0463 419728 - 418625 - | hypothetical protein TERM 225 419350 - 419334 - G 70 -10.1 -3.53224 | CACGCCTCCGCCAAA GCCCTAG AGG CCAGGGC CGCTACGCCAACTGC Tneu_0464 420987 - 419725 - | hypothetical protein TERM 226 419822 - 419802 - G 80 -10.3 -4.13728 | CAGATATGTGCAAAA CGGCCACCG CCC CGGCCGCCG CCGCAAGCCCCCCCA TERM 227 420127 - 420098 - G 73 -13.5 -2.79183 | overlap 420078 GTCAGCTCCACCACA GCCGGCATCGCCG CCGC CAGCGACGCCGCC TCCCCCGCATATTCT Tneu_0465 421702 - 421004 - | hypothetical protein TERM 228 421238 - 421223 - G 71 -6.8 -4.15788 | overlap 421224 AAGCTCTCTAACAAA CGCCCT AGCG AGGGCA AAACTAGCCGCTGTT Tneu_0466 421769 - 423718 + | 5-oxoprolinase (ATP-hydrolyzing) TERM 229 424232 - 424217 - g 71 -6.8 -4.21936 | gap 1 TGGAGAACTTCAAAA CGC-CGG AGG CCGCGCG GGGCGACCTAGAGGC Tneu_0467 423715 - 425259 + | 5-oxoprolinase (ATP-hydrolyzing) Tneu_0468 425591 - 425256 - | hypothetical protein Tneu_0469 426238 - 425666 - | PaREP1 family protein Tneu_0470 426875 - 426369 - | hypothetical protein TERM 230 426783 - 426804 + g 71 -5.7 -4.3739 | CGTGACTCCCCTATC CGACAGCGC CACT GAGCAGTCG TTTTCTCCGCAGATG Tneu_0471 428483 - 426882 - | hypothetical protein TERM 231 428070 - 428048 - G 93 -15.6 -3.41745 | CGCCCACAACATCAA GCGGCTCGAG CGG CTCAAGCCGC ACCGCGTCCACCCCC Tneu_0472 428545 - 429033 + | PaREP1 family protein Tneu_0473 429840 - 429211 - | PaREP1 family protein Tneu_0474 430309 - 429908 - | syntaxin domain-containing protein Tneu_0475 432079 - 431102 - | hypothetical protein Tneu_0476 432746 - 432183 - | dTDP-4-dehydrorhamnose 3,5-epimerase Tneu_0477 433575 - 432736 - | dTDP-4-dehydrorhamnose reductase Tneu_0478 434537 - 433575 - | dTDP-glucose 4,6-dehydratase Tneu_0479 435496 - 434534 - | glucose-1-phosphate thymidyltransferase TERM 232 434722 - 434680 - G 71 -9.6 -3.78934 | CCTCGCTGAGAAGAA GAGACCGCGACGCGCCTCCC GAC GCCAGGCGCGCCCCCGACTC CAGCGACACGTAGTG Tneu_0480 436580 - 435594 - | glycosyl transferase family protein Tneu_0481 437929 - 436577 - | hypothetical protein TERM 233 437727 - 437703 - G 76 -10.8 -3.70926 | gap 1, overlap 437698 437701 ACAAGAGAAAGAAGA CCAGAGA-GGG CCTC CCCATCTCTGG AATAGATAATATGCG Tneu_0482 440370 - 437944 - | hypothetical protein TERM 234 439385 - 439369 - G 72 -2.3 -4.81551 | GAGGTACAGTAAAAA TATCATT AGT AAGGATA ATGAAATAAATTTGA TERM 235 439454 - 439437 - G 75 -2.1 -4.93877 | overlap 439420 439444 CTTTATTAAATAAAA TAATTAT TAGT ACAATTA CTACAAAAATCATAT TERM 236 439535 - 439549 + g 78 -2.9 -5.14965 | ACATAAAATAAATTC CTTAA TTCTT TTAAG TTTTTTACTAAAACT TERM 237 439718 - 439705 - G 85 -3.9 -5.40464 | TAGCATAAATAAAAA TAACA AAGA TGTTA AATTTGGAATATAAA Tneu_0483 440751 - 440464 - | hypothetical protein Tneu_0484 442068 - 440974 - | glycosyl transferase family protein Tneu_0485 443165 - 442065 - | glycosyl transferase group 1 Tneu_0486 444199 - 443162 - | glycosyl transferase group 1 Tneu_0487 444657 - 444232 - | hypothetical protein Tneu_0488 445732 - 444644 - | glycosyl transferase family protein Tneu_0489 446688 - 445753 - | NAD-dependent epimerase/dehydratase TERM 238 446319 - 446289 - G 76 -10.3 -3.70902 | TGCCGTAGACCGAAA CCGGCTCCAGCGG GTAAT CCTCCGGAGTCGG CATAACCCTAGCGTC Tneu_0490 447035 - 446685 - | hypothetical protein TERM 239 446840 - 446856 + g 73 -8.7 -3.9398 | overlap 446835 446833 GGCGGAGGGGGGTCA CGAGGTT CAT GACCTCG TTTATGGCCTTCTGG Tneu_0491 448300 - 447065 - | NAD-dependent epimerase/dehydratase Tneu_0492 448989 - 448297 - | nucleotidyl transferase TERM 240 448609 - 448621 + g 74 -6.9 -4.36914 | GGGGACGAGGGCTAT GGCGG CGT CTGCC TTTTCTAGGGCGGCG TERM 241 449526 - 449582 + H 100 -20.3 -3.32514 | opp_overlap 449504 449538 449539, overlap 449539 CTCCCGCCGATTCTT CGCTGGGAGAAATCGATGGAGAAAAAC GGC GAATTTCTCCATCGTTTTCTCCCGGCA TTCAATTGTTCTGTG TERM 242 449539 - 449569 + H 91 -11.2 -4.37658 | opp_overlap 449504 449538 449539, overlap 449526 TTCGCTGGGAGAAAT CGATGGAGAAAAAC GGC GAATTTCTCCATCG TTTTCTCCCGGCATT TERM 243 449569 - 449539 - H 70 -11.2 -2.91276 | opp_overlap 449539 449526, overlap 449504 449538 TTCGCTGGGAGAAAT CGATGGAGAAAAAC GGC GAATTTCTCCATCG TTTTCTCCCGGCATT TERM 244 449796 - 449848 + H 100 -18.1 -3.66356 | opp_overlap 449792 449798, overlap 449792 449798 GCGCAGGGAAATAGA AAGCTTTCTATTGTTCTGTATCAGA GAC TCTGGTACAGGATAGTAGAAAGCTG TTTGACGTTGGGAGT TERM 245 449798 - 449846 + H 100 -20.7 -3.41222 | opp_overlap 449792 449798, overlap 449792 449796 GCAGGGAAATAGAAA GCTTTCTATTGTTCTGTATCAGA GAC TCTGGTACAGGATAGTAGAAAGC TGTTTGACGTTGGGA TERM 246 449846 - 449798 - H 90 -11.9 -4.35044 | opp_overlap 449792 449798 449796, overlap 449792 GCAGGGAAATAGAAA GCTTTCTATTGTTCTGTATCAGA GAC TCTGGTACAGGATAGTAGAAAGC TGTTTGACGTTGGGA Tneu_0493 450331 - 450909 + | hypothetical protein TERM 247 452829 - 452852 + F 71 -12.4 -2.78216 | opp_overlap 452842, overlap 452823 TAGCAGGCGCCGGAG GCGGCGCCTT AAAC AAGCCGCCGC TGGTTGCTGGGCGTA Tneu_0496 452974 - 453453 + | hypothetical protein TERM 248 453725 - 453752 + G 85 -9.2 -4.58685 | gap 1, overlap 453726 GTTTAAAGAGGGCGT CTTGGCGCTGGAG ATC CTCCA-CGCCAAC TTTTTCCACGACTTT TERM 249 453726 - 453751 + G 76 -12.7 -3.34488 | gap 1, overlap 453725 TTTAAAGAGGGCGTC TTGGCGCTGGAG ATC CTCCA-CGCCAA CTTTTTCCACGACTT Tneu_0497 453450 - 453887 + | PaREP1 domain-containing protein Tneu_0498 454876 - 454169 - | hypothetical protein TERM 250 454226 - 454241 + g 70 -3.9 -4.65895 | overlap 454214 454211 CAGCGCCTGCCTCAG CGCGG TTTCGT CTGCG TTTTTGAGTAGGCGC TERM 251 454256 - 454273 + g 72 -2.7 -4.77165 | GTTTTTGAGTAGGCG CTTTACG GCTT TGTAGAG TTTTCTTATCCCAGG Tneu_0499 455922 - 454873 - | SMC domain-containing protein Tneu_0500 456357 - 456166 - | hypothetical protein Tneu_0501 457091 - 456831 - | hypothetical protein Tneu_0503 458804 - 458379 - | DNA polymerase beta subunit TERM 252 458737 - 458712 - G 74 -5.3 -4.56597 | overlap 458713 GGTCTGGCTTAAAAA TGTGGCGCGCA GAGC TGAACGCCACC GGCGGCTGTCGAGGC TERM 253 459330 - 459346 + r 71 -4.3 -4.56597 | overlap 459345 CGTATTCGCCCTCCT CGATCAG TCT CTGGGCG TTTTTCAAAAAGGCG Tneu_0505 459933 - 459490 - | syntaxin domain-containing protein Tneu_0506 460454 - 460089 - | DNA polymerase beta subunit Tneu_0507 460819 - 460445 - | HEPN domain-containing protein TERM 254 460936 - 460972 + r 72 -6.4 -4.37092 | gap 1, overlap 460950 GGCTCGGAGCCCGGG CCCTCG-GGAAGCGCCG GCCG CGGCCAGTCCGCGGGGG TTTTGTGCAAGGCCT TERM 255 460950 - 461007 + r 88 -13.9 -3.76393 | overlap 460936 461006 GCCCTCGGGAAGCGC CGGCCGCGGCCAGTCCGCGGGGGTTTT GTGC AAGGCCTCCCCCGGCCGCCGGCGGCCG TTTGGCTTAACGTCT Tneu_0508 461604 - 461071 - | PaREP1 family protein Tneu_0509 462114 - 461800 - | hypothetical protein Tneu_0510 462978 - 462208 - | hypothetical protein TERM 256 462631 - 462666 + g 79 -12.4 -3.53012 | GGCTACCATGGCGGC GCCGAGGGCGGCGAGG AGGA CCTCGCCGCGGGTGGC TTTGCCGAGCCACGC Tneu_0511 463034 - 463822 + | FkbM family methyltransferase Tneu_0512 464815 - 463817 - | glycosyl transferase family protein TERM 257 463916 - 463930 + g 79 -7.8 -4.54477 | CGCTATTGTCCGCCA GCTCAC TGG GTGGGC TTTTGTGGCTTTTGC TERM 258 464051 - 464072 + g 83 -4.4 -5.04325 | overlap 464053 GTGGTCTACGTAGTT CCTGAGGA CGGCCT TCCTCACG TTTTTGTCCTTTACC TERM 259 464402 - 464459 + g 88 -13.4 -3.5627 | gap 3 TCTCCCTACCTCCAC CTCGGCGGG-CGGCTGCCCCGCGGCGTAG CTC CT-CGCGGCTGGGT-GCTGATCCGCCGGG TTTCCCCCCTCGTCT Tneu_0513 464884 - 465951 + | glycosyl transferase family protein Tneu_0514 465991 - 466911 + | glycosyl transferase family protein Tneu_0515 467683 - 466901 - | hypothetical protein Tneu_0516 468945 - 467680 - | glycosyl transferase group 1 TERM 260 470132 - 470154 + G 72 -11.2 -3.37796 | CGAGGCTTTACCTCC CGGCGCTGGG GAC CCTGGCGCTG TTCTACCTACTGCCC Tneu_0517 468946 - 470325 + | hypothetical protein Tneu_0519 472093 - 471293 - | radical SAM domain-containing protein Tneu_0518 470376 - 471350 + | hypothetical protein Tneu_0520 472641 - 472228 - | hypothetical protein TERM 261 473290 - 473307 + G 74 -3.3 -4.84359 | overlap 473278 473289 GTGGTGGTGCCGCAC GGCGTGG GGGA CGACGTC TTTTTGTACAGGTGG Tneu_0521 472762 - 473754 + | glycosyl transferase, group 1 Tneu_0522 474153 - 473926 - | hypothetical protein TERM 262 474192 - 474182 - R 89 -4 -5.65927 | TATGTAAATAAAAAA GTAT CTT ATAC ACACGGCGACTGAGG Tneu_0523 475343 - 474273 - | glycosyl transferase family protein Tneu_0524 475617 - 476858 + | Rh family protein/ammonium transporter Tneu_0525 476855 - 477181 + | nitrogen regulatory protein P-II Tneu_0526 477208 - 477999 + | NAD+ synthetase Tneu_0527 478076 - 478309 + | hypothetical protein Tneu_0528 479151 - 478294 - | asparagine synthase Tneu_0529 479753 - 479148 - | protein of unknown function DUF71 ATP-binding region Tneu_0530 479807 - 481138 + | thiamine biosynthesis protein ThiC Tneu_0531 481241 - 482167 + | quinolinate synthetase complex, A subunit TERM 263 483612 - 483585 - g 76 -9.8 -3.7941 | gap 1, overlap 483586 TAGGCTGGAGAACAA GGCCGAGGGCCCC ACC AGCGCCCTCG-CC GCGGCCTCCATCTAC Tneu_0532 482164 - 483702 + | nicotinate-nucleotide pyrophosphorylase Tneu_0533 485018 - 483699 - | ATPase TERM 264 484272 - 484284 + g 70 -4.7 -4.56597 | TGCGTGGTCTCTTAT CTCCC CAA GGGTG TTTTTCCCCGCCGCG TERM 265 485025 - 485010 - G 70 -4.8 -4.56597 | opp_overlap 485012 CTCCCTGTCTAAAAA TATAAC CACA GTTATA TAATCAAGGTTATAT TERM 266 485717 - 485762 + G 70 -4.6 -4.56597 | overlap 485720 CGCCAAGGCCTCTGT CTTGGCCTCCCTAGAG-CCGGT GCTC GCCGCCCTCT-GGGGGGCCTTG TTTTTCGGCCAGAGG TERM 267 485720 - 485759 + G 82 -9.3 -4.40561 | overlap 485717 CAAGGCCTCTGTCTT GGCCTCCCTAGAG-CCGGT GCTC GCCGCCCTCT-GGGGGGCC TTGTTTTTCGGCCAG Tneu_0534 485061 - 485846 + | hypothetical protein Tneu_0535 485872 - 486675 + | hypothetical protein TERM 268 488815 - 488805 - g 74 -6.8 -4.28994 | CATGACCTACGAAAA CGTC ACA GACG CAGTATATATGCTCG Tneu_0536 486712 - 489075 + | protein of unknown function DUF699 ATPase putative Tneu_0537 490132 - 489308 - | hypothetical protein Tneu_0538 490536 - 490132 - | translation initiation factor IF2/IF5 Tneu_0539 491785 - 490568 - | acyl-CoA dehydrogenase domain-containing protein TERM 269 491523 - 491480 - G 76 -13.1 -3.30007 | overlap 491482 AATAGGGGCGGAGAA GAGCCTCGCCGAGTTGAAG TACACG CTTAAGCCCGGCGAGGCGC GGGACACCTCCTCAG TERM 270 491521 - 491482 - G 82 -14.3 -3.21593 | overlap 491480 TAGGGGCGGAGAAGA GCCTCGCCGAGTTGAAG TACACG CTTAAGCCCGGCGAGGC GCGGGACACCTCCTC TERM 271 492501 - 492467 - g 77 -8.5 -4.37886 | opp_overlap 492474 CCAGCCGTTAGAAAA GCCGCAACCCCCC AGGGCAGGA GGGTGGTTGAGGC GGTGAGGGGGATAGC Tneu_0540 491831 - 492775 + | aldo/keto reductase Tneu_0541 492822 - 494807 + | 3-hydroxyacyl-CoA dehydrogenase NAD-binding Tneu_0542 494837 - 495925 + | cellulase Tneu_0543 495922 - 496899 + | MscS mechanosensitive ion channel Tneu_0544 497504 - 496896 - | phosphate uptake regulator, PhoU TERM 272 497289 - 497270 - G 71 -5.6 -4.371 | CGTAGGAGACGAAAA GCGCCCCC TTTA GGAAACGC AGATCCGTCGCCACG TERM 273 497326 - 497356 + g 77 -14.8 -2.79831 | TAGCGGGCCACCGCC TCCATCACCAGGTC GGA GACCTCGTGGTGGA TCTCGTGGAGCTTCG Tneu_0545 498251 - 497547 - | ABC transporter related Tneu_0546 498970 - 498242 - | ABC transporter related Tneu_0547 499932 - 498967 - | inner-membrane translocator TERM 274 499852 - 499840 - G 81 -6.2 -4.76041 | opp_overlap 499839 499840 CAGAGCCATGAAAAA CGCC ACAGA GGCG ATGGTCTTGGCGTAT Tneu_0548 500804 - 499929 - | inner-membrane translocator Tneu_0549 502165 - 500804 - | extracellular ligand-binding receptor Tneu_0550 502987 - 502235 - | ABC transporter related Tneu_0551 503873 - 502992 - | binding-protein-dependent transport systems inner membrane component Tneu_0552 504793 - 503870 - | phosphate ABC transporter, inner membrane subunit PstC Tneu_0553 506011 - 504830 - | phosphate ABC transporter, periplasmic phosphate-binding protein Tneu_0555 508262 - 507528 - | hypothetical protein Tneu_0556 508833 - 508420 - | hypothetical protein TERM 275 509090 - 509072 - R 74 -3 -4.91109 | overlap 509074 GCTCTATTAGAAAAA CGCCGC GAGGACG GAGGCG TCAATCGCGATCACG Tneu_0557 509255 - 509091 - | hypothetical protein Tneu_0558 509885 - 510175 + | hypothetical protein Tneu_0559 510172 - 510582 + | hypothetical protein Tneu_0560 511555 - 511190 - | paREP9 TERM 276 511902 - 511877 - R 77 -11.9 -3.33661 | gap 1, overlap 511875 511878 GATCTAACCATAAGA CCGAGAGCCTGC CCA GCAGGCTC-CAG AAATCAAAAGATAGT TERM 277 511902 - 511878 - R 70 -12.1 -2.59714 | overlap 511877 511875 ATCTAACCATAAGAC CGAGAGCCTGC CCA GCAGGCTCCAG AAATCAAAAGATAGT Tneu_0561 512554 - 512255 - | hypothetical protein TERM 278 513330 - 513310 - R 95 -12.5 -4.63479 | opp_overlap 513308 513323 TAGTAGAAACTAAAA CAGGGGGAG CTA CGCCCCCTG CGCTGTTTTAAAACC TERM 279 513606 - 513575 - R 71 -7.3 -4.09015 | gap 2, overlap 513579 AAAAGATAGTAGAAA CGTACTGAGGCGCCG TGGG CGGCGCCTT-G-ACG GCGATGTGGCCCGCC Tneu_0562 514713 - 513844 - | hypothetical protein Tneu_0563 517409 - 514713 - | CRISPR-associated RAMP Crm2 family protein TERM 280 514885 - 514911 + g 72 -2.1 -4.77036 | gap 1, overlap 514886 514888 TCGAGGTCCCCGTTA AGCCTCCTCTCG GCGT CGTGGGG-GGCG TTTTTGCTGATGGCG TERM 281 517367 - 517392 + g 83 -4.5 -5.02074 | opp_overlap 517382 CCTCCTCCCAGTGCG GGGGGCTCGAC AGCA GGAGAGCCGCC TTTTTTGAAAAGTCC Tneu_0564 517471 - 518361 + | CRISPR-associated RAMP Cmr4 family protein family protein Tneu_0565 518358 - 518783 + | CRISPR-associated Cmr5 family protein TERM 282 519487 - 519448 - g 75 -13.4 -2.87344 | overlap 519451 GAGGCTGGTCAGAGA CGACTGCGGGGGGAAGCC CAGG GGCCTCCCCCCGATGCCC GTCGTGGCGGACGCG TERM 283 519484 - 519451 - g 79 -15.9 -2.69151 | overlap 519448 GCTGGTCAGAGACGA CTGCGGGGGGAAGCC CAGG GGCCTCCCCCCGATG CCCGTCGTGGCGGAC Tneu_0566 518783 - 519952 + | CRISPR-associated RAMP Cmr1 family protein Tneu_0567 519949 - 520737 + | CRISPR-associated RAMP Cmr6 family protein Tneu_0568 520985 - 521533 + | hypothetical protein Tneu_0569 521546 - 522364 + | hypothetical protein Tneu_0570 522351 - 522758 + | hypothetical protein Tneu_0571 522752 - 523291 + | hypothetical protein TERM 284 523724 - 523712 - g 74 -5.5 -4.49981 | overlap 523714 TACAGGATCACAAAA CTGGA GTT CCCAG ACTCCGCAGGCGGTG Tneu_0572 523301 - 525082 + | hypothetical protein Tneu_0573 525567 - 525980 + | hypothetical protein Tneu_0574 526021 - 526344 + | hypothetical protein Tneu_0575 527014 - 527379 + | paREP9 TERM 285 527392 - 527408 + T 75 -5.7 -4.62069 | TAGGGGGTTGTGTTG GCCGCGT TGA GCTCGGC TTTTTCGACTGCCGG Tneu_0576 528491 - 527949 - | CRISPR-associated Cas4 family protein Tneu_0577 528756 - 528469 - | CRISPR-associated Cas2 family protein Tneu_0578 529664 - 528753 - | CRISPR-associated Cas1 family protein Tneu_0579 530511 - 529648 - | CRISPR-associated RAMP Csa1 family protein Tneu_0580 532000 - 531524 - | hypothetical protein Tneu_0582 533995 - 533555 - | phosphohistidine phosphatase, SixA TERM 286 534349 - 534376 + H 74 -3.2 -4.87807 | overlap 534356 CTCTTATGGCCTCTA GGCGGCGGCCGG CGCA CCAGCTTCTGTC TTTTTCGTCTCTTGG Tneu_0584 534791 - 535048 + | hypothetical protein Tneu_0585 535700 - 535092 - | hypothetical protein TERM 287 535321 - 535333 + g 71 -5.5 -4.39002 | overlap 535320 GTGATGCCGGGGTAC CTCTC GGT GAGGG TTTTGTGGAGGGTTT TERM 288 535865 - 535840 - H 89 -17.7 -2.89039 | AACTATTTCGATACA TCTGCCTGACG GCAC CGTCAGGCAGA TGAGCCGAGGAAGTG Tneu_0586 536112 - 537353 + | transposase IS605 OrfB TERM 289 537446 - 537405 - T 70 -10.8 -3.32844 | overlap 537375 537406 537424 CGGCCGACTGCAGAA GC-CGGCGAGCCCGAACGCA CGGG CGCGGCCGGGCCC-CCGCGC CCGCGGCCGCCCTCT TERM 290 537436 - 537406 - T 70 -11.8 -2.59564 | gap 1, overlap 537375 537405 537424 GGCCGACTGCAGAAG CCGG-CGAGCCCG AACGCA CGGGCGCGGCCGG GCCCCCGCGCCCGCG TERM 291 537449 - 537424 - T 78 -14.7 -2.53263 | overlap 537375 537406 537405 GCGAGCCCGAACGCA CGGGCGCGG CCGGGCCC CCGCGCCCG CGGCCGCCCTCTGGG Tneu_0587 537949 - 537587 - | DNA polymerase beta subunit Tneu_0589 539139 - 538807 - | hypothetical protein Tneu_0590 539434 - 539144 - | hypothetical protein Tneu_0591 539998 - 539462 - | nicotinamide-nucleotide adenylyltransferase Tneu_0592 541479 - 539995 - | phenylalanyl-tRNA synthetase, alpha subunit Tneu_0593 541744 - 541514 - | CopG family transcriptional regulator Tneu_0594 542114 - 541797 - | hypothetical protein Tneu_0595 543274 - 542150 - | hypothetical protein TERM 292 542353 - 542336 - G 80 -11.3 -3.72324 | opp_overlap 542336 542335 542333 CATCTTTATCAAGAA GGCGTAC AGGG GTACGCC GTATTTCGTCGCGTA Tneu_0596 544889 - 543393 - | hypothetical protein TERM 293 543474 - 543492 + g 72 -13.8 -2.60813 | opp_overlap 543456, overlap 543453 543476 CGCTGCGGCTCCCAC CGTCGCCG CCG CGGCGGCG ATCTTTAGAAAGCTG TERM 294 543476 - 543493 + g 76 -12.7 -3.35224 | opp_overlap 543456, overlap 543474 543453 CTGCGGCTCCCACCG TCGCCGC CGCG GCGGCGA TCTTTAGAAAGCTGT Tneu_0597 544971 - 545276 + | hypothetical protein Tneu_0598 546482 - 545256 - | hypothetical protein Tneu_0599 546848 - 546513 - | hypothetical protein TERM 295 546707 - 546734 + g 77 -4.1 -5.0133 | gap 1, overlap 546706 546708 ACGCCACGTCTGCGT CT-GTGGAGCGC GCCTG GGGCTCCGCGAG TTTTTTAGACAGCTC Tneu_0600 546897 - 547577 + | acetyl/acyl transferase related protein Tneu_0601 547826 - 547656 - | hypothetical protein TERM 296 547876 - 547836 - R 100 -13.9 -5.05782 | opp_overlap 547866, overlap 547866 ATCCACTTTAAAAAA CCCTCCGTAGCGGCGTCTG AAG CAGACACAGCGCCGGAGAG CCGCTTGCTCGTCAG Tneu_0602 549061 - 548111 - | peptidase M42 family protein TERM 297 548681 - 548636 - G 76 -12.7 -3.29144 | gap 3, overlap 548606 GTACCGCCTGGAGAA GGCGGCGG-GG-GT-CATGGGG CCGAT CCCCATGGACTCCACCTCCGCC CTCCCGGCGGCTCCC Tneu_0603 549124 - 549792 + | purine phosphorylase family 1 Tneu_0604 550020 - 549796 - | hypothetical protein TERM 298 550561 - 550605 + G 100 -9 -5.40072 | overlap 550562 TGGAGAGGGCCGCCT TGCTGGCGCCCGCCGTGGCG CTTGC CGCCTCGGCGCTGGTCGGCG TTTTTTTCAAGGCGG TERM 299 550562 - 550604 + G 76 -10.3 -3.83561 | overlap 550561 GGAGAGGGCCGCCTT GCTGGCGCCCGCCGTGGCG CTTGC CGCCTCGGCGCTGGTCGGC GTTTTTTTCAAGGCG Tneu_0605 550128 - 550958 + | protein of unknown function DUF340 membrane Tneu_0606 551015 - 551179 + | paREP10 Tneu_0607 551745 - 551176 - | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase Tneu_0608 552452 - 551742 - | hypothetical protein TERM 300 552117 - 552075 - G 78 -10.5 -3.86897 | gap 2, opp_overlap 552090 CCTACCCCCCAGAAA CACGGCC-ACAACC-CTGGGC CTA GCCCTGTGGTAGAAGGCCGTG ATCTCCCTAGCCTCC Tneu_0609 552508 - 552723 + | CopG family transcriptional regulator Tneu_0610 553412 - 552804 - | 6-phospho 3-hexuloisomerase TERM 301 552836 - 552849 + g 73 -4.5 -4.59109 | overlap 552835 552831 TTGCGTGTCTCTTGG CGAGG TCGC TCTCG TTTTTGCCAAGTCTC Tneu_0611 553815 - 553441 - | S-adenosylmethionine decarboxylase proenzyme Tneu_0612 554087 - 554671 + | hypothetical protein Tneu_0613 554668 - 554877 + | hypothetical protein TERM 302 555376 - 555356 - g 74 -6 -4.57569 | opp_overlap 555346 GCAGGCCTTCAAAAA CCTGAGGG TCTTC CCCCCCGG CACCGGCATAATACA TERM 303 557471 - 557448 - g 70 -4.4 -4.57353 | GCGGAGTACATAAAA CACGGCGGGA TACT CCCCTACGTG CTGAAGAGGATCCTC Tneu_0614 554874 - 557510 + | aconitate hydratase 1 Tneu_0615 557523 - 557849 + | hypothetical protein Tneu_0616 557846 - 558520 + | triosephosphate isomerase TERM 304 558524 - 558552 + T 78 -14.6 -2.62263 | gap 1, opp_overlap 558523 558522 CTGGCCGATTAAATC GCGGCGGA-GCCG CCTG CGGTGTCCGCCGC TCATATGCCCCCGAT TERM 305 558560 - 558574 + T 74 -12.8 -2.75844 | overlap 558559 TCCGCCGCTCATATG CCCCCG ATA CGGGGG ATTTACAATACACCC Tneu_0617 559244 - 558594 - | hypothetical protein Tneu_0618 559273 - 559719 + | ribosomal protein S6e TERM 306 559711 - 559697 - T 86 -5.6 -5.19998 | AGAAGGAAAAGAAAA CCGAGG AGG CCCCAG CCCAGTAGCACTACT Tneu_0619 560021 - 559722 - | AsnC family transcriptional regulator TERM 307 560153 - 560120 - H 70 -12.3 -2.62396 | GACCGGGCTAGACTA CCGGGTGGGGTAGCC GGCT GGCTACGGCCCCCGG GTCGCCAGGGCGTGC Tneu_0620 560258 - 560692 + | signal-transduction protein Tneu_0621 560839 - 561639 + | beta-lactamase domain-containing protein Tneu_0622 562823 - 561612 - | amidase TERM 308 561840 - 561854 + g 75 -8.6 -4.15044 | GGCGGTAGTCGGCGT TACGAC CAC GTCGTA TTTCTTAAACAGCGA TERM 309 562368 - 562346 - G 72 -12.6 -3.05384 | GCGGCTTGTAGCCAA CCACGCCGCA GAG CGCGGCGGGG ATCCTCACGGAGCCC TERM 310 562562 - 562600 + g 86 -13.8 -3.49102 | opp_overlap 562564 TCTTTCCCACCACCA CAGCCCCCTCGGAGAGAA GCG TTTTCACCACGGGGGCTG TTCTATCCGACATCT Tneu_0623 562927 - 562820 - | hypothetical protein Tneu_0624 563499 - 562927 - | translin family protein TERM 311 563076 - 563101 + g 83 -4.6 -5.06414 | overlap 563078 GGCTCTCCACAGCAT CTTTGAGGCG CCTAGC CGCCTCCACG TTTTTCTTAAGCAGC Tneu_0625 564405 - 563527 - | hypothetical protein Tneu_0626 564466 - 564609 + | hypothetical protein Tneu_0627 565654 - 564692 - | hypothetical protein TERM 312 565634 - 565607 - G 95 -11.2 -4.57569 | GTAGCTCTTTAAAAA GGCGGAGCCGGA GGGC CCCAGCCCCACC ACCTTCGCTACCGGC Tneu_0628 566079 - 565654 - | signal-transduction protein TERM 313 565957 - 565938 - G 70 -10.7 -3.48276 | opp_overlap 565930 CCCGCTCCGACACAA CCCCCAC CACCCT GTGGGGG TTGCCAGGTTCTACC Tneu_0629 566295 - 566116 - | hypothetical protein Tneu_0630 566823 - 566317 - | hypothetical protein TERM 314 566568 - 566546 - G 71 -9.1 -3.84648 | TCCAACATCACCAAA GCCACCCTA TCTGG CAGGGCGGC GACGCCGTCGACGAC TERM 315 566572 - 566586 + g 72 -11.4 -3.39908 | overlap 566571 566568 TGGCAGGGCGGCGAC GCCGTC GAC GACGGC TGTGTTTTCGAAGGG Tneu_0631 566880 - 568649 + | translation initiation factor aIF-2 Tneu_0632 569256 - 568753 - | Miro domain-containing protein Tneu_0633 569744 - 569253 - | dual specificity protein phosphatase Tneu_0634 570998 - 569772 - | cytochrome c biogenesis protein transmembrane region TERM 316 570084 - 570134 + g 80 -10.1 -4.12198 | overlap 570129 570132 ACAGGGGGTCCACAC CGCGCCGAGGGAGGCGCCTAGGA GCACG TCGCCGGCTCTGCCCACGGCGCG TTTTGACGCCTTGTA Tneu_0635 571029 - 571643 + | beta-lactamase domain-containing protein TERM 317 571701 - 571712 + F 71 -7.2 -4.03234 | GGGGCCCCGCCTTCG CGCC CTAC GGCG TTTCTCTCAGAGAAG TERM 318 572309 - 572292 - g 74 -4.1 -4.7497 | GCCACCTACGAAAAA GACGC GTTGCTGA GCGTC CTCGTCCCCACCATG Tneu_0636 571779 - 572447 + | hypothetical protein TERM 319 573251 - 573268 + G 75 -14.1 -2.87132 | CGGCTACTGCGAGGT GGCCCCC CACG GGGGGCC TCTATACGGGAGGCA Tneu_0637 572469 - 573497 + | FAD dependent oxidoreductase Tneu_0638 573521 - 573685 + | CopG/Arc/MetJ family transcriptional regulator TERM 320 573982 - 573963 - g 72 -2.7 -4.74801 | overlap 573965 CAAGGCCATGAAAAA CAGCGGC GTAGCT ACCGCGG TAACAATCGGCTACA Tneu_0639 573715 - 574521 + | hypothetical protein Tneu_0640 574902 - 574600 - | twin arginine-targeting protein translocase Tneu_0641 575120 - 575968 + | Sec-independent protein translocase TatC Tneu_0642 576792 - 575953 - | hypothetical protein TERM 321 576771 - 576793 + g 71 -8.5 -4.03234 | overlap 576772 TGTGAACGCCGGTTG TGTGATCCA CGATC TGGATCACG TTTATATAGCCGCGG Tneu_0643 576821 - 577186 + | hypothetical protein Tneu_0644 577226 - 578314 + | major facilitator transporter TERM 322 578726 - 578689 - g 82 -11.9 -3.89614 | opp_overlap 578717, overlap 578690 CGCAACGCCGACAAA GCCGATCGGCCCCCTCT ACCC AGAGGAGGCCGCTAGGG AGCTGGAGGCTAGGT TERM 323 578725 - 578690 - g 81 -15.4 -2.93447 | opp_overlap 578717, overlap 578689 GCAACGCCGACAAAG CCGATCGGCCCCCTCT ACCC AGAGGAGGCCGCTAGG GAGCTGGAGGCTAGG Tneu_0645 578333 - 579229 + | carbamate kinase Tneu_0646 580479 - 579226 - | histidyl-tRNA synthetase TERM 324 579392 - 579418 + g 76 -6.5 -4.56597 | gap 1 TCGCCGAGCTCTATG GCTACGCTGTGG CCAG CCGC-GCGGAGC TTTTTCGCCAACGCA TERM 325 579610 - 579624 + g 80 -10 -4.09685 | overlap 579605 GCGGCCGCCGCCGCC TACCGC CAG GCGGTA TTTTCCGACGTAGGC Tneu_0647 581522 - 580476 - | saccharopine dehydrogenase TERM 326 581064 - 581109 + g 89 -15.5 -3.30124 | gap 1, opp_overlap 581088 581091, overlap 581067 GTACTCCTCTATGAG GTCGGTGGGGCTCC-ACGTTAT AGA GTAGCCTAGGGGCCCCACCGGC TTCTCCGGGATGCCG TERM 327 581529 - 581539 + r 71 -8.2 -3.93489 | CACCCTCACGCACTT GGGC TAC GCCC TTCTATTTATACTTG Tneu_0648 582564 - 581542 - | glycosyl transferase family protein TERM 328 583116 - 583087 - g 74 -3.4 -4.80882 | ACGTGATAGTAAAAA TGGAGGCGAGGT ACACGG ACCACGGCACCA TAAGGCGCATCAAGA TERM 329 583424 - 583406 - g 73 -10.2 -3.65046 | opp_overlap 583406 583403, overlap 583379 CGGGTATTTCAAGAA GGCGAGGC CGC GCCTCGTC TCACTTGCTGAACAT TERM 330 583587 - 583598 + G 70 -4.4 -4.56961 | overlap 583591 CCCGACCTAACGGGC TACG ACTA CGTA TTTTATGTAGATGTT Tneu_0649 582660 - 583676 + | hypothetical protein Tneu_0650 583812 - 584201 + | hypothetical protein Tneu_0651 584744 - 584193 - | nucleoside-diphosphate kinase Tneu_0652 585993 - 584776 - | NADH/ubiquinone/plastoquinone (complex I) Tneu_0653 587825 - 585990 - | NADH dehydrogenase (quinone) TERM 331 586857 - 586838 - G 72 -11.4 -3.28712 | gap 1, overlap 586839 CGTGGTGCGCCAGAA GGCCGGCGG CCC CCG-CGGCC GCCGCTATGACGCCT Tneu_0654 589249 - 587825 - | NADH dehydrogenase (quinone) TERM 332 589044 - 589030 - G 93 -11.4 -4.3129 | opp_overlap 589027 589030 CAGTTAGTAGGAAAA CGCCGT TAA ACGGCG TGACTTTAAACGACA Tneu_0655 589533 - 589246 - | NADH-ubiquinone oxidoreductase chain 4L Tneu_0656 589982 - 589536 - | NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 Tneu_0657 590480 - 590010 - | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Tneu_0658 591526 - 590477 - | NADH dehydrogenase (quinone) Tneu_0659 592743 - 591535 - | NADH dehydrogenase (quinone) Tneu_0660 592793 - 593710 + | hypothetical protein Tneu_0661 593745 - 594308 + | GTP cyclohydrolase I Tneu_0662 594305 - 594979 + | short-chain dehydrogenase/reductase SDR Tneu_0663 596213 - 594936 - | hypothetical protein Tneu_0664 596531 - 597001 + | AsnC family transcriptional regulator Tneu_0665 597694 - 597002 - | hypothetical protein Tneu_0666 597775 - 600249 + | peptidase M1 membrane alanine aminopeptidase Tneu_0667 600239 - 600871 + | uracil phosphoribosyltransferase Tneu_0668 601441 - 600863 - | peptidase A24A prepilin type IV TERM 333 601132 - 601117 - G 74 -4 -4.82901 | gap 1 TGTTGTTTAGAAAAA GCCA-GA GCA TCGTGGC CGGTAGCAGCGCGGA TERM 334 601352 - 601328 - G 76 -12.7 -3.2794 | opp_overlap 601346 601349, overlap 601329 GTTTAGGTATATCAA CGCGGCGGCGG GAG CCGCGGCCGCT AGGAAGATCCGAGGG TERM 335 601351 - 601329 - G 78 -16.2 -2.5655 | opp_overlap 601346 601349, overlap 601328 TTTAGGTATATCAAC GCGGCGGCGG GAG CCGCGGCCGC TAGGAAGATCCGAGG Tneu_0669 602340 - 601438 - | bifunctional phosphoglucose/phosphomannose isomerase Tneu_0670 602386 - 604344 + | type III restriction protein res subunit TERM 336 604409 - 604397 - T 71 -4.7 -4.57569 | GCACGTCTGTAAAAA CCCAG GAG CAGGG GGCACGTCTTCAACC TERM 337 604429 - 604442 + T 84 -9.5 -4.51378 | CGTCTTCAACCGCCT GGGGG ACAG CCCCC TTTTCTCCTCTACGT Tneu_0671 605258 - 604686 - | CopY family transcriptional regulator TERM 338 605496 - 605464 - g 84 -9.2 -4.57837 | gap 1, opp_overlap 605462 605465, overlap 605465 605466 ACATGTCGCTAAAAA CGCCGTCTCTCTCAA GGAG CTGAGAGAGGCGG-G TCTTGAATTCGGGAG Tneu_0672 605378 - 606055 + | hypothetical protein Tneu_0673 606057 - 606341 + | hypothetical protein Tneu_0674 606573 - 606334 - | hypothetical protein Tneu_0675 606680 - 606570 - | hypothetical protein Tneu_0676 606841 - 606677 - | hypothetical protein TERM 339 607826 - 607842 + G 74 -5.7 -4.45083 | opp_overlap 607827, overlap 607827 GCGGGGAGGACATAC ACGGTGG TCA CCGCCGA TTTTGTGACTCTAGA TERM 340 608332 - 608315 - g 71 -6.3 -4.36914 | gap 1, opp_overlap 608326 TGGCGCTGTAGAAAA GACG-GGA GGA TCCTCGTC GTGGGGTCTCTGGAG TERM 341 608694 - 608658 - g 74 -5.9 -4.52857 | AGGCCCCATACAAAA CCGTATTGATCCAGG GCCTCAT CCTAGACAAACACGG CCAGAAGATGTCTAA Tneu_0677 606899 - 609832 + | isoleucyl-tRNA synthetase Tneu_0678 610243 - 611499 + | glycosyl transferase family protein Tneu_0679 611902 - 611528 - | hypothetical protein Tneu_0680 612130 - 612807 + | hypothetical protein Tneu_0681 613299 - 612781 - | PUA domain-containing protein Tneu_0682 613447 - 614196 + | XRE family transcriptional regulator Tneu_0683 614193 - 615248 + | tRNA (guanine-N(2)-)-methyltransferase TERM 342 615411 - 615427 + G 76 -13.7 -3.04144 | GGCGGCCACGGCCCC CGACCGC GCG GCGGTCG TGTTGAGAATCGAGG TERM 343 615514 - 615498 - g 73 -9.4 -3.89501 | opp_overlap 615488, overlap 615488 GAAGAGGGGTACAAA CGCCGT TGTAG ACGGCG TGAGGGGCATCGAGG Tneu_0684 615271 - 615783 + | adenylate kinase, conjectural TERM 344 615980 - 615990 + G 74 -6.8 -4.36914 | GGGGATCCAAGACGC CGCT AGG AGCG TTTTGTCGAAAGGCG Tneu_0685 615780 - 616211 + | hypothetical protein Tneu_0686 616882 - 616208 - | putative RNA methylase TERM 345 616370 - 616355 - G 70 -3.2 -4.59773 | overlap 616357 CGCCACCTCCAAAAA GACGTT GAGC AACGGC CTTACGTCCATAGCG Tneu_0687 617874 - 616879 - | hypothetical protein TERM 346 617358 - 617345 - G 78 -2.3 -5.03314 | TCCAGGTTGAAAAAA GCCCC GAGG AGAGC CATAAATACCAACAG TERM 347 617600 - 617571 - G 79 -12.1 -3.52162 | overlap 617569 617567 617572 CTGATACAAAATATA TGGCGTCGGCCTC AAAG GAGGCCAACACCT GCTCCAGCTCCCTAA TERM 348 617599 - 617572 - G 79 -15.6 -2.70574 | overlap 617571 617569 617567 TGATACAAAATATAT GGCGTCGGCCTC AAAG GAGGCCAACACC TGCTCCAGCTCCCTA Tneu_0688 618863 - 617874 - | hypothetical protein TERM 349 618744 - 618765 + g 79 -8.7 -4.14541 | overlap 618740 618737 CTGTTTACGGATCTC CGCGAGGAG GTTC TTCTTCGCG TTTATCTCGTTAGTG Tneu_0689 618957 - 619670 + | XRE family transcriptional regulator Tneu_0690 620135 - 619671 - | ribosomal protein L13 Tneu_0691 620172 - 620525 + | hypothetical protein Tneu_0692 620860 - 620522 - | hypothetical protein TERM 350 620618 - 620630 + g 70 -3.3 -4.62336 | TGTCCCCGCCACGAT CCTCA CCA TGTGG TTTTTCACCTCAACT Tneu_0693 621165 - 620857 - | hypothetical protein Tneu_0694 622194 - 621193 - | transcription factor TFIIB cyclin-related TERM 351 621364 - 621381 + g 83 -4.7 -5.11033 | overlap 621379 ACCTGCCGGGTCTTT GCCCGCG GTGA TGCCGGC TTTTTTGGCCTTCTG Tneu_0695 623209 - 622250 - | replication factor C Tneu_0696 623637 - 623206 - | hypothetical protein Tneu_0697 624827 - 623664 - | TGS domain-containing protein TERM 352 624303 - 624318 + g 70 -10.4 -3.53224 | opp_overlap 624315 GAATATCTTCTCGAC CGCCTC AAGC GAGGCG TTTGCGCCGACAGTC Tneu_0698 624899 - 626212 + | isocitrate dehydrogenase, NADP-dependent Tneu_0699 627076 - 626207 - | NMD3 family protein Tneu_0700 628085 - 627123 - | DNA-cytosine methyltransferase Tneu_0701 628127 - 628714 + | hypothetical protein Tneu_0702 628994 - 628692 - | hypothetical protein TERM 353 629717 - 629690 - g 72 -12 -3.36878 | overlap 629684 AGATAACAACCAAGA CCCGGGACATCT TGAT AGACGTCACGGG GACTGACCTCCGCTC Tneu_0703 629041 - 630591 + | phenylalanyl-tRNA synthetase, beta subunit Tneu_0704 630614 - 630976 + | hypothetical protein Tneu_0705 631197 - 630973 - | hypothetical protein Tneu_0706 631752 - 631357 - | YbaK/prolyl-tRNA synthetase associated region TERM 354 631556 - 631573 + g 78 -6.9 -4.64766 | ACCTCTTCTGGCGTA GCTAGGC GACA GCCCAGC TTTTTCAGATCTAGC Tneu_0707 632198 - 631755 - | hypothetical protein Tneu_0708 632246 - 632914 + | orotidine 5'-phosphate decarboxylase Tneu_0709 632911 - 633507 + | adenylate kinase TERM 355 633501 - 633513 + F 78 -4.8 -4.87786 | opp_overlap 633501 GGCAAGGCAGCAGAA GCCT TAAAT AGGC TTTTTGTCGGGTTGG TERM 356 633864 - 633851 - g 79 -8.1 -4.56597 | CCGTTTCTCCAAAAA CGACC GGTT GGTCG TCGCGCCCCTAGCCG Tneu_0710 633531 - 634085 + | hypothetical protein Tneu_0711 634072 - 635100 + | 3-dehydroquinate synthase TERM 357 635539 - 635576 + T 71 -11.9 -2.79501 | gap 1, overlap 635533 CCCGGTGTACCCGCG GCGGGTCCTTGAGCCCCC AGA GGGGGC-CGGGGAGACGC TCTAGTAGAAGTCTA Tneu_0712 635973 - 635578 - | hypothetical protein TERM 358 635872 - 635890 + g 83 -4.6 -5.04385 | opp_overlap 635872, overlap 635857 TATCGACTTTATAAG CGATATAT TAT ATTTATCG TTTTTTAAGACTATA Tneu_0713 637210 - 635996 - | 2-methylcitrate synthase/citrate synthase II Tneu_0714 638060 - 637494 - | hypothetical protein Tneu_0715 638119 - 639474 + | TIP49 domain-containing protein Tneu_0716 639918 - 639466 - | hypothetical protein TERM 359 639664 - 639688 + g 70 -10.7 -3.54424 | opp_overlap 639642 639671 TGAGACCGAAAGCGC CGCTAAAGTCC AGC GGACTCTGGCG TTTGAACGGGTGAAA TERM 360 639724 - 639706 - G 73 -4.4 -4.59853 | overlap 639717 TGAACGGGTGAAAAA CGTGGCCA CAA TCGCCGCG AAGAGGAGAGCCGTG Tneu_0717 641408 - 639915 - | peptidase M50 TERM 361 639986 - 640026 + g 72 -2.4 -4.82901 | gap 1, opp_overlap 639995 639999, overlap 639988 TGAACACCAACATCG CTGCGAGAACCCAGGTGAC AGCC GTCACCAGCGC-CTTGCCG TTTTTCTCCCCCAAC TERM 362 640824 - 640857 + g 70 -3.1 -4.64657 | overlap 640825 GGCCGCAACGCCGCT CGCCAGCACTG CTACCTTAGCCT CGGTGCTGGCC TTTTTGAAGCTTTCC Tneu_0718 642031 - 641459 - | hypothetical protein Tneu_0719 642080 - 642763 + | hypothetical protein Tneu_0720 643075 - 642752 - | ribosomal protein 60S Tneu_0721 643313 - 643110 - | ribosomal protein L38 Tneu_0722 643967 - 643437 - | cobalamin adenosyltransferase Tneu_0723 645028 - 644063 - | FAD-dependent pyridine nucleotide-disulphide oxidoreductase TERM 363 644353 - 644367 + g 89 -7 -5.0916 | CAGCCACGGGCAACT CCTGGG TCT CCCCGG TTTTTCTGTTCCGCA TERM 364 644674 - 644691 + g 76 -9.1 -4.07568 | opp_overlap 644661, overlap 644662 TAGCCTCGCCGGGTA CGCCGAG CTCC TTCGGCG TTTTCCCAAACGCCA Tneu_0724 645102 - 645578 + | ribosomal protein S19 Tneu_0725 645583 - 646023 + | ribosomal protein S17 TERM 365 646044 - 646066 + F 85 -12 -3.96327 | AACCGTTTACCGCCT GTCCCTAGGC GTC GCCTAGCGAC TTTCTCCTCGCCCAT Tneu_0726 646361 - 647020 + | ERCC4 domain-containing protein Tneu_0727 648088 - 647015 - | glycoside hydrolase family protein TERM 366 647176 - 647159 - G 100 -7.7 -5.17576 | gap 1 GACTAAGGCAAAAAA GGGCT-GG TAC CCGAGCCC CCATTCGTAGCCGTG TERM 367 647545 - 647531 - G 73 -10 -3.67 | opp_overlap 647529, overlap 647529 CGAATGTGTAAAAGA TACGGC GAC GCCGTA GGATTTCACCACGTC Tneu_0728 648508 - 648089 - | UspA domain-containing protein Tneu_0729 648725 - 649150 + | hypothetical protein Tneu_0730 650387 - 649353 - | glyceraldehyde-3-phosphate dehydrogenase, type II TERM 368 650185 - 650201 + g 83 -5 -5.11033 | TCCTCTATCGTGCCC GCGGGC TCTAT GCCGGC TTTTTTGAACTTCTC Tneu_0731 651610 - 650384 - | phosphoglycerate kinase Tneu_0732 651726 - 652301 + | hypothetical protein TERM 369 653792 - 653776 - g 84 -11.5 -4.09685 | opp_overlap 653775 GGCTAGGGCGGAAAA GGAGGGC AAG GCCCCCC GTCTTCCCACGTGGC Tneu_0733 652328 - 654157 + | threonyl-tRNA synthetase editing domain-containing protein Tneu_0734 654221 - 654622 + | S-adenosylmethionine decarboxylase proenzyme Tneu_0735 654638 - 655561 + | hypothetical protein Tneu_0736 656141 - 655683 - | molybdopterin-guanine dinucleotide biosynthesis protein B Tneu_0737 656440 - 656138 - | PadR-like family transcriptional regulator Tneu_0738 657492 - 656437 - | myo-inositol-1-phosphate synthase Tneu_0739 659493 - 657574 - | hypothetical protein TERM 370 658395 - 658408 + g 71 -6.7 -4.25104 | opp_overlap 658395 658398, overlap 658380 GGCCTACCGATACGA GAAGG TCGG CCTTC TTTTGGTCAACCCGC TERM 371 658447 - 658437 - G 75 -8.2 -4.19746 | opp_overlap 658436 658445, overlap 658438 GCGACTCGAAAACAA GCGC GCG GCGC ATATCTACTATATAG Tneu_0740 660148 - 659495 - | CRISPR-associated Cas4 family protein Tneu_0741 661688 - 660129 - | protein synthesis factor GTP-binding TERM 372 660790 - 660768 - G 72 -2.5 -4.8048 | opp_overlap 660787, overlap 660770 660771 GTTCGATACGAAAAA TATCGGGGC TACGC GCCCCGCCG GCATGGCCTTTGCGG Tneu_0742 662231 - 661701 - | inorganic diphosphatase TERM 373 662289 - 662260 - H 70 -9.5 -3.53012 | gap 1, opp_overlap 662260 662256, overlap 662261 TTTTCCCTTTGGAAA TCG-GTATACGTGT TCT ACACGTATACGCAA TACTTTAAAGTCTTT Tneu_0743 662319 - 664619 + | V-type ATPase 116 kDa subunit Tneu_0744 664619 - 665296 + | hypothetical protein Tneu_0745 665516 - 665277 - | hypothetical protein Tneu_0746 665682 - 665509 - | ribosomal protein L29 Tneu_0747 666432 - 665758 - | ribosomal protein S3- domain-containing protein Tneu_0748 667206 - 666649 - | ribosomal protein L22 TERM 374 667274 - 667255 - H 72 -10 -3.59738 | CACCACAGTTTTAAA GAGGAGCT GTAT AGCCCCTC CGTGTCGCTCTGGCG TERM 375 667331 - 667298 - g 77 -10.9 -3.61398 | opp_overlap 667310 TCTGGCGCCTAATAA GAGGCGAACACGGCG TCCT CGCGGCGCTTGCCTC AGCCTCCTCCTACGC TERM 376 667472 - 667495 + G 71 -8 -4.03234 | overlap 667473 AGATAAACAGGCCCG ACGCCCCCTT GGTC ACGGGGGCGG TTTCTGTAAACGCCG Tneu_0749 667276 - 668106 + | UbiA prenyltransferase Tneu_0750 668088 - 668789 + | hydrolase Tneu_0751 669243 - 668770 - | hypothetical protein Tneu_0752 670122 - 669283 - | TM helix repeat-containing protein Tneu_0753 672300 - 670363 - | H+-ATPase subunit I-like protein TERM 377 670756 - 670711 - G 70 -12.5 -2.89564 | opp_overlap 670711 CGCGTACGTCATAGA CGCCGCCAGCCACACAGCC GAGAAGAG GGCTATGTGGGGGGCCGCG TCAATTAGGCCGGCT Tneu_0754 672333 - 672542 + | hypothetical protein Tneu_0755 673102 - 672539 - | ribonuclease H Tneu_0756 673616 - 673236 - | hypothetical protein Tneu_0757 673678 - 674403 + | hypothetical protein Tneu_0758 674605 - 674826 + | hypothetical protein Tneu_0759 676152 - 674812 - | aminotransferase class-III TERM 378 676031 - 675990 - G 82 -12.9 -3.62046 | CTACGTCTTCAACAA CGGGGCCGTAGCCCCTGGC AACC ACCAGGGGGTACCACCGCG AGAACGACTGCATTA Tneu_0760 677070 - 676306 - | FeS assembly ATPase SufC TERM 379 678173 - 678144 - g 75 -2.7 -4.88918 | gap 1 GTACTGGAAAGAAAA CGGGGC-TAAGGTG TGG CATCTGGCGCCCCG CACCAGTAGCAGAGT Tneu_0761 677143 - 678567 + | FeS assembly protein SufB TERM 380 679031 - 679063 + G 84 -11.9 -4.09685 | opp_overlap 679029 679027 CGGTGTATGAACACC CCAGCGGCTGCATGT TCT ACACGCCGCCTCTGG TTTTGGCGGATCAGC Tneu_0762 678598 - 679194 + | hypothetical protein Tneu_0763 679201 - 680100 + | alpha-L-glutamate ligase Tneu_0764 680467 - 680180 - | hypothetical protein Tneu_0765 680990 - 680460 - | hypothetical protein Tneu_0766 681330 - 680974 - | hypothetical protein TERM 381 681022 - 681036 + g 71 -7.8 -4.07568 | overlap 681015 GAGTCTTACGACGTC GTCGTG TTC CACGGC TTTTACAGCCCCGGC TERM 382 681335 - 681348 + H 79 -9.5 -4.16016 | CGGCAACGCACGTTT GCCCC CGGG GGGGC TTTATTAAAGCATGG Tneu_0767 681402 - 681968 + | ribosomal protein L15e TERM 383 682031 - 681996 - T 72 -9.7 -3.67878 | gap 2, overlap 681979 ATCACGTCAATACAA CTGCC-GCGACGGG-CT ACGG AGACCCGCCGCAGGCGG CGCTGTGAGGTAGCC Tneu_0768 682923 - 682069 - | hypothetical protein Tneu_0769 683650 - 682916 - | thymidylate synthase, flavin-dependent TERM 384 683805 - 683818 + G 80 -3.1 -5.04385 | GCTCCATCTTTCGAC GTGGT TAAC ATCAC TTTTTTGAACGTGTC TERM 385 683856 - 683846 - g 70 -3.2 -4.59773 | GTCTATTCCGAAAAA CGTC ATC AACG AGACACTCCAGGTGC TERM 386 685183 - 685199 + G 70 -10.1 -3.51934 | overlap 685141 685182 CCACGTCGGCTCTCG CGGCGCT TCT AGCGCTG TCTTTCTACACGGCC Tneu_0770 683805 - 685304 + | glycosyl transferase family protein Tneu_0771 686739 - 685291 - | lysyl-tRNA synthetase TERM 387 685648 - 685636 - G 73 -9.1 -3.9712 | opp_overlap 685634 GTAGTCCAGCACAAA GGTGG GCT CCACC AGCTTCTTCTCCACC TERM 388 686545 - 686520 - G 81 -5.4 -4.84761 | gap 1 AGAGGTCTATAAAAA CGACGTTGGGG TGCCT CCTCA-CGTCG GTCACCCTGCCGGCG Tneu_0772 687397 - 686768 - | hypothetical protein TERM 389 687134 - 687092 - G 70 -12.5 -2.94099 | CGCCTCTACCACATA GGCCAGGGGGGCCACCTCC AGGCG GGAGGGGTCCCCCCCGTCT ACATACACAAAGCGG Tneu_0773 688830 - 687397 - | UbiD family decarboxylase TERM 390 688522 - 688509 - G 76 -9.5 -4.11216 | GCCCCAGCTCGAAAA GGCCG GCGG CGGCC TTGAACTTATCCAGG TERM 391 688713 - 688693 - G 82 -12.5 -3.6579 | overlap 688695 AACCGACTCGAACAA GACGGCGGG CCC CCCGCCGTA CATAACCCTCCTCAA TERM 392 688711 - 688695 - G 86 -15.1 -3.40611 | overlap 688693 CCGACTCGAACAAGA CGGCGGG CCC CCCGCCG TACATAACCCTCCTC Tneu_0774 689743 - 688850 - | hypothetical protein Tneu_0775 690171 - 689767 - | putative transcriptional regulator TERM 393 690285 - 690268 - H 83 -14.1 -3.23274 | overlap 690250 690263 GCCTTCACAAGTGAA GCCGGGC AAAA GCCCGGC AGACCCTCACCCTAA TERM 394 690641 - 690614 - H 79 -12.7 -3.53012 | overlap 690615 GCCCCCTCCCCCAAA GGGATGGCGGC CGATCC GCCGCCATCCG CCCGAGGATGGGGGC TERM 395 690640 - 690615 - H 82 -16.2 -2.71712 | overlap 690614 CCCCCTCCCCCAAAG GGATGGCGGC CGATCC GCCGCCATCC GCCCGAGGATGGGGG TERM 396 690828 - 690846 + H 91 -13.1 -4.10657 | opp_overlap 690840 GGGGCTACCCCGAGT GCCGGGC GAAGA GCCCGGC TTTTGCCCGGTCTAA TERM 397 691008 - 690990 - H 70 -12.4 -2.71791 | overlap 690989 AGTCGCTCCTGAAAT CCCAGGGC CCA ACCCTGGG GCGGGGGGCGATACT TERM 398 691961 - 691939 - g 88 -19.2 -2.58714 | overlap 691935 691956 TCGGAGATCAACCCA CCCGCCGTTG AAC CAACGGCGGG ACTCCCATACGTCAT Tneu_0776 691597 - 692256 + | hypothetical protein TERM 399 692250 - 692237 - f 74 -4.5 -4.79053 | AAAGACTAAAACAAA TCCGG GACT CCAGA CTCTAACTCATCTTT TERM 400 692952 - 692930 - f 100 -14.9 -4.07647 | AGAGCCCAAACCAAA TCCCCACGG GACAA CCGTGGGGA GATGTGGGGCTTGGG TERM 401 693059 - 693047 - f 74 -10.5 -3.59979 | GCCCCGTAGGCGAAA CCGCC CGT GGCGG AGTCCCGGGATCCCG TERM 402 693125 - 693107 - f 77 -13.8 -3.01712 | TTTGCCGTGGGAATA CGCCGGCC ACT GGCCGGCA AGGCTAAACACGTCC TERM 403 693197 - 693186 - f 74 -7.2 -4.2354 | GAAAGCTGAAAAGAA CCCC GGAA GGGG GGTGAAAAGAGCCTG TERM 404 693281 - 693268 - f 77 -9.5 -3.90112 | overlap 693246 CCTCCCCGAAGGAAA CCCCG GTGA CGGGG GAGTACGAGGGGAGG TERM 405 694047 - 694013 - f 70 -10.7 -3.28712 | gap 2 GGCCGTGGGGCAGAA GCCGGGCCGTGAGGTCC GGT GGACC-CGCGGCC-GAC GAAGATCCCGGCGGT TERM 406 694413 - 694387 - f 75 -9.3 -4.07568 | overlap 694402 TGGGGCCCGTGAAAA GGGGACGGGGA ACGAG CCCCCGCGCCC GTACCGAGAACCGAC TERM 407 694750 - 694737 - g 70 -3.1 -4.59109 | overlap 694738 CAGAGTCGGCAAAAA CTACG AAAT CGTAA TCGCCGATATGTCTA Tneu_0777 694666 - 695190 + | hypothetical protein TERM 408 695817 - 695787 - f 75 -11.1 -3.48276 | gap 1, overlap 695773 695788 CCGGGGCCTAGAGAA CGCTCGTGCCCCCA CCAG TGGGGGC-CGGGCA TGACAGAAAAGTTAC TERM 409 695816 - 695788 - f 70 -12.4 -2.68823 | gap 1, overlap 695773 695787 CGGGGCCTAGAGAAC GCTCGTGCCCCCA CCAG TGGGGGC-CGGGC ATGACAGAAAAGTTA Tneu_0778 697355 - 697555 + | hypothetical protein TERM 410 697801 - 697824 + T 72 -6 -4.45577 | overlap 697803 CAGCGGGGTAGAGGC GGGGACTTAT GTCG ATAGGTCCGC TTTTGTAGAGTTTGT Tneu_0779 699296 - 698013 - | amino acid permease-associated region Tneu_0780 700518 - 699421 - | chorismate synthase TERM 411 699817 - 699831 + g 70 -3.4 -4.66537 | opp_overlap 699812, overlap 699812 699819 TATGGAGAAGGCGGC GGCGGC TAT GTCGGC TTTTATCTTGCCGAA TERM 412 699978 - 699995 + g 88 -2.5 -5.46629 | overlap 699980 GTTGATCCACCACGG GGAGGGG CCGC CCCCAGC TTTTTTTGACGTCTT Tneu_0781 701297 - 700515 - | shikimate 5-dehydrogenase Tneu_0782 701368 - 702069 + | NADP oxidoreductase coenzyme F420-dependent Tneu_0783 702458 - 702039 - | NUDIX hydrolase Tneu_0784 702536 - 703651 + | PhoH family protein TERM 413 703729 - 703711 - g 81 -13.8 -3.31144 | opp_overlap 703717 703718 TGTGGAGCTGGAGAA GCCGAGGG CTG CCCCCGGC AGAGTTGTCGTGAAG TERM 414 704135 - 704121 - g 74 -3.4 -4.82901 | overlap 704122 704123 GGGGCGTTAGAAAAA TCGGCG TGG CGCCAG GCATGCGGGTGCTGG Tneu_0785 703652 - 704647 + | alcohol dehydrogenase Tneu_0786 705813 - 704887 - | NAD-dependent epimerase/dehydratase TERM 415 705453 - 705423 - G 76 -10.3 -3.70902 | CGCCGTAGACCGAAA CCGGCTCCAGCGG GTAAT CCTCCGGAGTCGG CATAACCCTGGCGTC TERM 416 705877 - 705859 - R 95 -11.6 -4.56597 | opp_overlap 705870 CCTTCTCGTGAAAAA CCTCGCCC TTT GGGCGGGG TCACCCTTTGAAGTA Tneu_0787 707077 - 705878 - | 3-phosphoshikimate 1-carboxyvinyltransferase Tneu_0788 708086 - 707055 - | 3-dehydroquinate synthase Tneu_0789 709027 - 708083 - | transketolase central region TERM 417 708312 - 708292 - G 84 -10.3 -4.14392 | opp_overlap 708291 708293, overlap 708293 CCTCAACCGTCAAAA CCGCGCCGG TGG CCGACGCGT ATTTCTCAACGGCGG TERM 418 708311 - 708293 - G 76 -13.8 -3.08314 | opp_overlap 708291 708293, overlap 708292 CTCAACCGTCAAAAC CGCGCCGG TGG CCGACGCG TATTTCTCAACGGCG TERM 419 708293 - 708311 + g 74 -11.6 -3.51934 | opp_overlap 708293 708292, overlap 708291 CTCAACCGTCAAAAC CGCGCCGG TGG CCGACGCG TATTTCTCAACGGCG Tneu_0790 709824 - 709021 - | transketolase domain-containing protein Tneu_0791 709946 - 710905 + | tyrosyl-tRNA synthetase Tneu_0792 711015 - 712001 + | phospho-2-dehydro-3-deoxyheptonate aldolase Tneu_0793 712590 - 711967 - | hypothetical protein TERM 420 712069 - 712081 + g 71 -6.9 -4.15044 | CACTGGGATATATTT CGTCG AGA CGGCG TTTATTAAAGCGCGG Tneu_0794 712923 - 712636 - | hypothetical protein TERM 421 713101 - 713122 + r 93 -12.9 -4.27117 | overlap 713102 GAATGACCACCACGC TCCCCGCCC TCTA GGGCGGGGC TTTCTGTTGTAAGGG TERM 422 713102 - 713121 + r 88 -16.4 -3.15788 | overlap 713101 AATGACCACCACGCT CCCCGCCC TCTA GGGCGGGG CTTTCTGTTGTAAGG Tneu_0795 715318 - 713144 - | aldehyde oxidase and xanthine dehydrogenase molybdopterin binding TERM 423 714304 - 714286 - G 74 -11.6 -3.5241 | opp_overlap 714298, overlap 714284 TACGCTCGATAAAGA GGGTGGCC TCC GGCCTCCC GGCCCCCCTGTAGGC Tneu_0796 715362 - 716363 + | hypothetical protein Tneu_0797 716803 - 716360 - | 2Fe-2S iron-sulfur cluster binding domain-containing protein Tneu_0798 717618 - 716800 - | molybdopterin dehydrogenase FAD-binding TERM 424 717681 - 717651 - R 70 -5.3 -4.41348 | gap 1, overlap 717655 CCGTTTTTAAATAAA GACAGCCCCGGCGC CCAC GCCCCGAGAC-GCC GGCCGCCCCTCCAGC Tneu_0799 718550 - 717798 - | prephenate dehydrogenase Tneu_0800 718616 - 719203 + | hypothetical protein Tneu_0801 719374 - 719946 + | hypothetical protein TERM 425 721119 - 721140 + G 71 -5.7 -4.42386 | GTGGATCCCACAGGC CGCTGGGGC GGCT GGCCAAGCG TTTTGTCGGTCAAGA Tneu_0802 719946 - 721184 + | hypothetical protein Tneu_0803 721214 - 721615 + | hypothetical protein TERM 426 721597 - 721609 + F 75 -9.1 -4.14511 | GGCCACGGGGAGGTA CAGCC TCT GGCTG TTTTAGCATGAACTT Tneu_0804 721617 - 721979 + | hypothetical protein Tneu_0805 722011 - 722682 + | ArsR family transcriptional regulator TERM 427 724011 - 724030 + G 73 -10 -3.61404 | gap 1, opp_overlap 724005 GTGTATATAGCCCCC GGCG-TGGG GAA CCCAGCGCC TTCTCTAGTTACTGA Tneu_0806 722679 - 725000 + | hypothetical protein Tneu_0807 725002 - 725547 + | hypothetical protein Tneu_0808 726423 - 725536 - | 3-dehydroquinate dehydratase, type I TERM 428 726580 - 726605 + H 71 -11.1 -3.05536 | gap 1, overlap 726569 TGAGCTGTGTGCGGA TG-GCCCGGGGG TCG CCCCTGGGCGCG TGTTGGACGTGGTTT TERM 429 727176 - 727202 + H 83 -8.7 -4.52589 | gap 1, opp_overlap 727186 GCCCACCACTCCCCA CGCCC-ACAAGC GCCG GCTCGTAGGGCG TTTTCTCTAAACAGC Tneu_0810 727338 - 728336 + | aminotransferase class I and II Tneu_0811 728336 - 729151 + | shikimate kinase Tneu_0812 729459 - 729148 - | hypothetical protein TERM 430 730521 - 730501 - g 88 -13.9 -3.61715 | opp_overlap 730508 CAGGCCGCCGAAGAA GGCGCCGCC AGC GGCGGAGCC TCAGGTGGTGTGGCT Tneu_0813 729539 - 730555 + | ribosomal protein L3 Tneu_0814 730566 - 731420 + | ribosomal protein L4/L1e Tneu_0815 731417 - 731662 + | ribosomal protein L25/L23 Tneu_0816 732089 - 731736 - | hypothetical protein Tneu_0817 732667 - 732131 - | hypothetical protein TERM 431 733037 - 733084 + G 89 -9.9 -4.56597 | gap 3 CCTCCCGACGCGCTG GCCGACGCGCTGACTCTCGCGGGG GCC CCCTCCGAG-GTCAGAG-G-CGGC TTTTTAGACACGGCG Tneu_0818 732758 - 733351 + | hypothetical protein Tneu_0819 733387 - 733656 + | DNA-directed RNA polymerase subunit L Tneu_0820 733653 - 734318 + | suppressor Mra1 family protein TERM 432 734845 - 734811 - g 72 -11.5 -3.36073 | gap 2, overlap 734809 734814 TATATCTCTCAAACA GAAGGG-GGGAG-AGGG GGC CCCGGCTCCCGCCCTTC GACCCAATAGGCAGA TERM 433 734966 - 734947 - g 70 -10 -3.55444 | opp_overlap 734950, overlap 734948 GCCTCAGTTCGTAAA CGAGCTGG AGCT CCAGCTCA GGCTGGGCTCCGAGG Tneu_0821 734315 - 735067 + | hypothetical protein Tneu_0823 737031 - 735709 - | hypothetical protein TERM 434 735902 - 735916 + g 74 -5.6 -4.46493 | overlap 735892 CAGACGTAGAGGCCG CGGTGG ACT CTGCCG TTTTCATGTATTTCG TERM 435 735943 - 735959 + g 74 -12.3 -3.12895 | overlap 735941 735939 TTCGCCGCAGATGGA GCACGTC TTA GACGTGC TGTGTTCGTCGGCGG TERM 436 736786 - 736798 + g 80 -3.3 -5.07486 | GGCGAAGAAGCCCAG CCACG CCT CGTTG TTTTTGTTGAGGATC TERM 437 737180 - 737161 - H 73 -12.8 -2.64472 | opp_overlap 737161 737165 737168, overlap 737158 TATGGCTTAAATTCA CCCCGCCC TGAA GAGCGGGG CTTTCGGTTGTAACT TERM 438 737822 - 737786 - g 80 -9.9 -4.04206 | GGATTCGCACACAAA CACGGCGGGGGCGGTGG GGG CCTTCGCCCACGGCATG GGGGCCACCGACATA Tneu_0824 737418 - 738665 + | 3-isopropylmalate dehydratase Tneu_0825 739574 - 738654 - | ornithine carbamoyltransferase Tneu_0826 741011 - 739665 - | AsnC family transcriptional regulator TERM 439 740634 - 740615 - G 76 -12.2 -3.28791 | opp_overlap 740592 AGGCGGTCTTGACAA CCTCGACT AGGT AGTCGAGG TCGGCCCGCGAGGCG Tneu_0827 741164 - 742930 + | phosphoadenosine phosphosulfate reductase Tneu_0828 742927 - 743385 + | peptidase zinc-dependent Tneu_0829 745438 - 743393 - | glutamate synthase (NADPH) Tneu_0830 747208 - 745502 - | glutamate synthase alpha subunit Tneu_0831 747738 - 747250 - | 3-isopropylmalate dehydratase, small subunit Tneu_0832 747828 - 748946 + | isopropylmalate/citramalate/homocitrate synthase Tneu_0833 749049 - 750026 + | 3-isopropylmalate dehydrogenase Tneu_0834 750363 - 750016 - | HEPN domain-containing protein Tneu_0835 751517 - 750363 - | alanine--glyoxylate transaminase Tneu_0836 752349 - 751510 - | hypothetical protein TERM 440 751934 - 751914 - G 70 -12.5 -2.90075 | CCGTTTGGAAGTAGA CGGCGAGGG TCC CCATCGCCG TGCTCCTCAGCGTAA Tneu_0837 752573 - 752364 - | hypothetical protein Tneu_0838 753459 - 752659 - | molybdopterin-guanine dinucleotide biosynthesis protein A Tneu_0839 753647 - 753459 - | hypothetical protein TERM 441 753501 - 753525 + g 73 -4.9 -4.59773 | GTCGGCGTACCACCG CGCGGCTCT GAAGGCG ATGGCCGCG TTTTTAAACCTAGCC Tneu_0840 754098 - 753670 - | hypothetical protein Tneu_0841 755176 - 754121 - | peptidase M48 Ste24p TERM 442 754750 - 754769 + g 71 -9.2 -3.75153 | CGAAGGCGTTGGGCG GGCCGTCG ACCA CCACGGCC TTTAGCTTGAAGGGC Tneu_0842 755296 - 755601 + | hypothetical protein TERM 443 757299 - 757273 - g 75 -7.8 -4.15565 | overlap 757274 757277 CCCACGAGGTTAAAA CCCACACGGCCG TGG CGGCCGCGGTAG CCCAGGGGAGAGCCG TERM 444 757295 - 757277 - g 73 -13.8 -2.75577 | overlap 757273 757274 CGAGGTTAAAACCCA CACGGCCG TGG CGGCCGCG GTAGCCCAGGGGAGA Tneu_0843 755598 - 757511 + | molybdenum cofactor synthesis domain-containing protein Tneu_0844 758760 - 757495 - | molybdenum cofactor synthesis domain-containing protein TERM 445 759070 - 759045 - g 86 -13.3 -3.48276 | CCTCTCCCTAGAGAA GGAGCTGGAGC TGGG GCTCGAGCTCC TAGGCCGGCCGGGTA TERM 446 759560 - 759545 - g 71 -6 -4.37886 | overlap 759546 GCACCGCTGAGAAAA GCGGCG TCGT CGCCGT ATGCCCCTGGCTTTC Tneu_0845 758785 - 759786 + | hypothetical protein Tneu_0846 760437 - 759781 - | hypothetical protein Tneu_0847 760694 - 760437 - | AsnC family transcriptional regulator Tneu_0848 761022 - 760723 - | hypothetical protein TERM 447 760891 - 760906 + g 72 -2.5 -4.82901 | overlap 760889 GGGCTTACACATAGC CGTCA GGGAGG TGGCG TTTTTCTCAACCACG Tneu_0849 761560 - 761057 - | AsnC family transcriptional regulator Tneu_0850 761676 - 762344 + | ribosomal protein S3Ae Tneu_0851 762901 - 762341 - | KH domain-containing protein Tneu_0852 762910 - 763710 + | non-specific serine/threonine protein kinase Tneu_0853 764221 - 763682 - | pyruvate ferredoxin/flavodoxin oxidoreductase Tneu_0854 765978 - 764206 - | thiamine pyrophosphate binding domain-containing protein TERM 448 764275 - 764320 + g 76 -9.7 -4.03234 | gap 1 GGTGGGGCAGACCTC GGCGCACAT-GCCGCAGCCC GTGCAGA GGGCTGGGTCGATGTACGCC TTTCTGTCACCCCGC TERM 449 765463 - 765436 - G 77 -11.2 -3.57144 | gap 1 TGGGTCACGCCTAAA GCTCCCCCACCTC GGG GGGGCGGGGG-GC TCCACCTCCACTGGG TERM 450 765946 - 765936 - G 71 -8.2 -4.07568 | opp_overlap 765916 765939 CGCCGGCGGCCAAAA CGCC GTA GGCG ATAGCCTCGTTTCCA Tneu_0855 766045 - 766320 + | DNA-directed RNA polymerase, M/15 kDa subunit TERM 451 766604 - 766574 - g 71 -8.9 -3.71848 | gap 1, opp_overlap 766571 CCTCTCCATCAAGAA GGGGCTTGGGGAGG TGGA CTTCCCCC-GCCCC CTAAGCCACGACCTC Tneu_0856 766419 - 766880 + | hypothetical protein Tneu_0857 767106 - 766867 - | hypothetical protein Tneu_0858 768151 - 767087 - | hypothetical protein TERM 452 767489 - 767447 - G 78 -14 -3.14132 | GTCTCTGCCCACGAA CCCCGCCAGATCCGCCTCCA CCC TAGCGGCGAAGTCGGCGGGG GCGAAGGCGGGCGAG TERM 453 767977 - 767960 - G 73 -10.5 -3.64703 | CCCCTCGCATCTAAA GCCGACG CAGA CGCCGGC TTGGGGAGGCCAGTC TERM 454 768065 - 768089 + g 71 -9.2 -3.83347 | GTAGGCATCCACCGA CCTCCTGGCG TATAT CACCAGGGGG TTCTGTTTAAGGTAT Tneu_0859 768634 - 768179 - | ribosomal S13/S15 domain-containing protein Tneu_0860 768750 - 769409 + | hypothetical protein TERM 455 770144 - 770161 + G 70 -12.7 -2.87132 | opp_overlap 770142 770143 770158 GTCTACATCACAACC GCCGTCG AATA CGACGGC TCTCTAAGCGGCGCG Tneu_0861 769406 - 770284 + | deoxyhypusine synthase Tneu_0862 770286 - 771251 + | glycosyl transferase family protein Tneu_0863 771248 - 771472 + | hypothetical protein Tneu_0864 771578 - 772063 + | Miro domain-containing protein TERM 456 772231 - 772217 - g 72 -11.4 -3.33798 | overlap 772215 772213 772220 AGGGGGATAAATACA GGAGGG CCT CCCTCC CAAGCCGCGGAGAGC TERM 457 772677 - 772657 - g 73 -8.9 -3.86015 | opp_overlap 772659, overlap 772659 GAGGTGGCGGAGAAA TACGGCGTC TTC GACGCCGCC GTCGTCTGCCACAGA TERM 458 772675 - 772659 - g 86 -13.7 -3.51934 | opp_overlap 772659, overlap 772657 GGTGGCGGAGAAATA CGGCGTC TTC GACGCCG CCGTCGTCTGCCACA Tneu_0865 772060 - 772896 + | hypothetical protein Tneu_0866 773559 - 772873 - | SPP-like hydrolase Tneu_0867 774105 - 773563 - | hypothetical protein Tneu_0868 774982 - 775881 + | hypothetical protein Tneu_0869 776447 - 776043 - | hypothetical protein TERM 459 777106 - 777143 + G 72 -11.9 -3.39856 | gap 1 TCTGCGCGAGAGGCG GGGGGGACCC-CCTCCGG CTG TCGGAGGAGGGGCTCGCC TTCGTTAAATATCTG Tneu_0870 776481 - 777218 + | hypothetical protein Tneu_0871 777592 - 777197 - | hypothetical protein Tneu_0872 778352 - 777597 - | silent information regulator protein Sir2 TERM 460 777681 - 777705 + g 76 -12.1 -3.3506 | opp_overlap 777678 777680, overlap 777672 CCCCCTTATGAAGAC GTCGGCGATGG CGG TCAACGCCGAC TTCTCCACGTTTACC Tneu_0873 778466 - 780118 + | peptidase S16 lon domain-containing protein Tneu_0874 780398 - 780108 - | hypothetical protein TERM 461 780474 - 780509 + H 95 -15.4 -3.99985 | gap 1, opp_overlap 780460, overlap 780477 AGGAGCCCGGCGTGG TCCCCGGCGAGCCCCCC GGC GGGGGGCTCGG-GGGTA TTGTTTAAATATGTG TERM 462 780477 - 780507 + H 100 -18.2 -3.58256 | opp_overlap 780460, overlap 780474 AGCCCGGCGTGGTCC CCGGCGAGCCCCCC GGC GGGGGGCTCGGGGG TATTGTTTAAATATG Tneu_0875 780522 - 781046 + | hypothetical protein Tneu_0876 781043 - 781798 + | resolvase domain-containing protein TERM 463 781902 - 781920 + G 72 -2.2 -4.84359 | overlap 781888 781904 GTGGCGGGCGCTGAC CTCTCCGC CCG GCGTGGTG TTTTTATACCCGTCG Tneu_0877 781864 - 782490 + | phosphoribosyltransferase Tneu_0878 782600 - 784186 + | CTP synthase Tneu_0879 784544 - 784176 - | NADH dehydrogenase subunit A Tneu_0880 784584 - 785363 + | hypothetical protein TERM 464 785935 - 785963 + G 70 -5.2 -4.56597 | gap 2, overlap 785938 ACGGGGCGAGAGGTT CTACTGGCGCTGGG GCC CCC-GCGCC-GAGG TTTTTGAGCCGGAGA Tneu_0881 785360 - 786109 + | stationary-phase survival protein SurE Tneu_0882 786122 - 786460 + | hypothetical protein TERM 465 786587 - 786563 - g 100 -16.5 -4.07568 | TTGTCTTTGTGAAAA GCCACCTGGAG GGC CTCCAGATGGC GAAATACGTCGAGGA TERM 466 786607 - 786625 + G 83 -16 -3.01791 | opp_overlap 786594 TACGTCGAGGAGTCC GGAGGCCG AGC CGGCCTCC TCTTCGGGCGCAGAT Tneu_0883 786466 - 787671 + | helicase C2 Tneu_0884 787930 - 788295 + | hypothetical protein Tneu_0885 788341 - 789228 + | peptidase M48 Ste24p Tneu_0886 789212 - 789574 + | hypothetical protein Tneu_0887 789973 - 789599 - | hypothetical protein Tneu_0888 790223 - 790047 - | hypothetical protein TERM 467 790766 - 790751 - g 74 -3.9 -4.8543 | overlap 790752 TAACGGGCAGAAAAA CCGGG GAGCCG CCCGA CCCGGTGGAGATAGC Tneu_0889 790261 - 790989 + | photosystem I assembly BtpA Tneu_0890 792074 - 790995 - | nucleotidyl transferase TERM 468 791649 - 791639 - G 71 -8.2 -4.07568 | CCCCCTCGTCTAAAA CGGC GAT GCCG AACCTGCCCACCTCC Tneu_0891 792786 - 792082 - | hypothetical protein Tneu_0892 792802 - 793068 + | hypothetical protein Tneu_0893 793189 - 793389 + | hypothetical protein Tneu_0894 793415 - 793873 + | histidine triad (HIT) protein TERM 469 794593 - 794571 - g 76 -13.5 -2.99471 | opp_overlap 794580 GGAGCTCTACAGATA CCTCCACGT GGCCG ACGTGGAGG ACGTACGCGTTGGGC TERM 470 794839 - 794784 - g 88 -13.2 -3.58726 | gap 1, overlap 794785 794828 CGTGCCTAGAGATAA GGCGGAG-CTCCTCCTCGCCTCGGCCC TCG AGATCGCGGAGAGGAGGAGGCTCCAGC TCGTCGCGGCCGCCA TERM 471 794839 - 794785 - g 77 -14.3 -2.75022 | gap 2, overlap 794784 794828 GTGCCTAGAGATAAG GC-GGAG-CTCCTCCTCGCCTCGGCCC TCG AGATCGCGGAGAGGAGGAGGCTCCAGC TCGTCGCGGCCGCCA Tneu_0895 793870 - 794913 + | hypothetical protein Tneu_0896 794910 - 795251 + | PilT domain-containing protein Tneu_0897 795282 - 795857 + | RNA polymerase Rpb7 Tneu_0898 795854 - 796075 + | DNA-directed RNA polymerase subunit E, RpoE2 Tneu_0899 796437 - 796048 - | hypothetical protein Tneu_0900 796493 - 799171 + | alanyl-tRNA synthetase TERM 472 799410 - 799386 - g 70 -9.9 -3.44284 | overlap 799384 GGTCCAGCAACAACA GCAGCAGCCCC AGC AGGGCGGCTAC CAGCCCAGCGAAGAC Tneu_0901 799168 - 799551 + | ubiquitin-associated domain-containing protein Tneu_0902 799580 - 800128 + | ribosomal protein L16 Tneu_0903 800097 - 800837 + | hypothetical protein Tneu_0904 801435 - 800845 - | hypothetical protein Tneu_0905 801462 - 803192 + | DNA polymerase B region Tneu_0906 803211 - 804035 + | hypothetical protein Tneu_0907 804072 - 804611 + | ribosomal protein L5 Tneu_0908 804699 - 805226 + | phosphodiesterase Tneu_0909 805223 - 806473 + | Fmu (Sun) domain-containing protein TERM 473 807784 - 807813 + G 72 -12.1 -3.03159 | gap 1, opp_overlap 807761, overlap 807788 GCGGGGCTATCACCC GCGGCGCGGCTAGC ACA GCTTGCCGCGT-GC TATTAAGCGGCTTCG TERM 474 807788 - 807810 + G 77 -14.8 -2.73994 | opp_overlap 807761, overlap 807784 GGCTATCACCCGCGG CGCGGCTAGC ACA GCTTGCCGCG TGCTATTAAGCGGCT Tneu_0910 806493 - 808019 + | hypothetical protein Tneu_0911 809362 - 808016 - | hypothetical protein TERM 475 808399 - 808385 - G 73 -9.2 -3.87815 | opp_overlap 808385 808384 GCTCACTGGGATAAA GGCCCC GCT GAGGCC GCCTATGGTGGAGGT Tneu_0912 809631 - 809359 - | ACT domain-containing protein TERM 476 810477 - 810465 - g 73 -9.1 -3.86346 | overlap 810468 CTACGGCTGTAGAAA CGACC CCA GGTCG GAGCTGACGTGGGAG Tneu_0913 809821 - 810882 + | tRNA synthetase class II (D K and N) Tneu_0914 810912 - 811685 + | electron transfer flavoprotein alpha/beta-subunit Tneu_0915 811682 - 812572 + | electron transfer flavoprotein alpha subunit Tneu_0916 813180 - 812569 - | proteasome endopeptidase complex TERM 477 813236 - 813217 - H 100 -16.4 -3.96291 | overlap 813208 TATAAACGTTATAAA CGGGGGCG CACC CGCCCCCG TGGCGGTTAGGATAG TERM 478 814041 - 814061 + G 72 -12.5 -3.01712 | AGGTGGGCAGGGAGG CGGCGGAGA AGC TCGCCGCCG TGTTGAAGGCCGGCG Tneu_0917 813236 - 814279 + | RNA 3'-phosphate cyclase Tneu_0918 815331 - 814276 - | small GTP-binding protein TERM 479 815209 - 815197 - G 78 -10.5 -3.85698 | CTTCTGCTTCACAAA GGCGG GCT CCGCC ACAGACCCCCTCGCC Tneu_0919 815637 - 816413 + | hypothetical protein Tneu_0920 817365 - 816733 - | hypothetical protein TERM 480 817960 - 817948 - g 73 -10.5 -3.59979 | CCCGGCTAGTTGAAA GGGGC TTC GCCCC CATGCTGAAGGCGAG Tneu_0921 817401 - 818303 + | NAD-dependent epimerase/dehydratase Tneu_0922 818326 - 818607 + | hypothetical protein TERM 481 818694 - 818682 - g 81 -5.5 -4.83615 | opp_overlap 818688, overlap 818684 GAGTTTTGAGAAAAA CCTCC TGG AGAGG ATCGCCTCCTATATA Tneu_0923 818665 - 819240 + | hypothetical protein TERM 482 820003 - 819982 - g 80 -10.1 -4.08767 | gap 1, overlap 819959 CGGAGTTGGGCAAAA GCCCCGG-GG CGG CCGCCGGGAC GGGCATAGTCCTCAT TERM 483 820074 - 820047 - g 91 -13.4 -3.71848 | gap 1 TGGCCTCAGCAACAA GCCGCGCC-GCCG CCC CAGCCGGCGCAGC CCGCCGCTCAGCAGG Tneu_0924 819270 - 820241 + | band 7 protein Tneu_0925 820238 - 820534 + | hypothetical protein Tneu_0926 820531 - 821469 + | hypothetical protein Tneu_0927 822259 - 821459 - | hypothetical protein TERM 484 822173 - 822192 + g 70 -12.8 -2.87931 | GCCGGGGGCGAGGCT CCGCGCGG CGCT CTGCGCGG TGTATAGGAAGTAGA Tneu_0928 823152 - 822310 - | zinc finger TFIIB-type domain-containing protein Tneu_0929 824147 - 823149 - | hypothetical protein TERM 485 823260 - 823317 + g 76 -13.1 -3.40403 | gap 1, overlap 823273 AACCCCCAGCGCCGC GTAGCCGAGCCCCCCGGC-GAGGCCGCC TGC GGCGGCCGCCGCCAGCAGGCTCGCCGCC TTGTGCTCGGCGAAG TERM 486 823273 - 823316 + g 72 -13.6 -2.64099 | overlap 823260 GCGTAGCCGAGCCCC CCGGCGAGGCCGCCTGCGGC GGCC GCCGCCAGCAGGCTCGCCGC CTTGTGCTCGGCGAA TERM 487 824322 - 824370 + G 82 -14.4 -3.18681 | opp_overlap 824326, overlap 824327 CACGTCGCTCTACAG GATATCCCCCCGGGAGCTCGCC CTCAC GGCGGGCGCCCAGGAGGGTCTC TTCCTCGCCTTCCAC TERM 488 824366 - 824326 - g 75 -13.8 -2.85351 | opp_overlap 824322 824327 TCGCTCTACAGGATA TCCCCCCGGGAGCTCGCC CTCAC GGCGGGCGCCCAGGAGGG TCTCTTCCTCGCCTT TERM 489 824327 - 824366 + G 82 -14.9 -3.13639 | gap 1, opp_overlap 824326, overlap 824322 CGCTCTACAGGATAT CCC-CCCGGGAGCTCGCC CTCAC GGCGGGCGCCCAGGAGGG TCTCTTCCTCGCCTT TERM 490 824910 - 824889 - g 93 -7.9 -5.03994 | gap 1, opp_overlap 824889 CGTGATAGACAAAAA CGCGGCG-GC GCT GCTCTCCGCG TTTCCAAACGCCATC Tneu_0930 824200 - 825138 + | aminotransferase class I and II TERM 491 825224 - 825183 - f 100 -18.8 -3.54424 | overlap 825138 825184 825186 CCGGAGCTGGCCAAA CGAGGGCC-CCTCGGCGCCC CTCT GGG-GCCGAGGCGGCCCCCA GACGCGCCGCCTGCC TERM 492 825223 - 825184 - f 100 -20.1 -2.72511 | overlap 825138 825183 825186 CGGAGCTGGCCAAAC GAGGGCC-CCTCGGCGCCC CTCT GGG-GCCGAGGCGGCCCCC AGACGCGCCGCCTGC TERM 493 825221 - 825186 - f 95 -19.1 -2.90813 | overlap 825138 825184 825183 GAGCTGGCCAAACGA GGGCC-CCTCGGCGCCC CTCT GGG-GCCGAGGCGGCCC CCAGACGCGCCGCCT TERM 494 825573 - 825549 - g 71 -8.5 -4.04149 | overlap 825542 825545 CAACTAGACGACAAA GGCCGCTTC GAGATCA GAGGCGGCC GGGTGAGGGCGCGCT Tneu_0931 825276 - 825905 + | phosphotransferase KptA/Tpt1 Tneu_0932 827029 - 825974 - | hypothetical protein TERM 495 827694 - 827736 + G 87 -17.6 -3.11072 | GACTCAATGGCTAGT CGGCGCGGCCGTCGCGGCTG TGG CGGCTGTGGCGGTTGCGGCG TATCTGTTGGCTAGG Tneu_0933 827113 - 827985 + | hypothetical protein Tneu_0934 827985 - 828902 + | hypothetical protein Tneu_0935 829113 - 829346 + | hypothetical protein Tneu_0936 831390 - 829318 - | hypothetical protein TERM 496 830418 - 830432 + g 71 -7.1 -4.18494 | GCACGGCGGCTGAGG CCGAG ACCTG CTCGG TTTTCGATACGCCTG TERM 497 831821 - 831875 + G 74 -12.6 -3.22298 | CCCTGCCCTCCTGCG GCTCCTCCTGCCGCCCACCGCCCTCT ACG AGGGGGAGATGGTCGTCGGGTCGAGC TTGGTGCTGGCTGGG TERM 498 832660 - 832639 - g 73 -10.1 -3.58864 | opp_overlap 832634 832659, overlap 832623 832637 CCAGCAGGATAAACA TCGTGGCGG CCCT CCGCTACGA GTAATGCTCTTCCTA Tneu_0937 831462 - 832664 + | hypothetical protein Tneu_0938 832664 - 833191 + | hypothetical protein Tneu_0939 833158 - 833415 + | hypothetical protein TERM 499 833835 - 833819 - g 74 -6.5 -4.33653 | opp_overlap 833818 833821, overlap 833815 833821 TATTCAAAAACGAAA GCGGTAG CCA CTACCTC GTCTTCATAGACCCA Tneu_0940 833755 - 834318 + | hypothetical protein TERM 500 835387 - 835369 - T 75 -2.4 -5.06414 | overlap 835370 TGTGGGGAAGAAAAA CTAAAGAG TCT CTCTTTCA ACTCCAACGTTTCAT Tneu_0942 836134 - 835883 - | hypothetical protein TERM 501 836141 - 836083 - G 72 -13.8 -2.57132 | opp_overlap 836138, overlap 836082 836110 CGGCCTCTTCACAAC GGCTCTCCTGACCCACCTGCCTAACAAC GAC GCCGTCAGGCAGGTGAACCAAGGGGGCA GAAAGGATGCTTCTG Tneu_0943 836648 - 836439 - | hypothetical protein Tneu_0944 838088 - 836670 - | hypothetical protein Tneu_0945 838138 - 839292 + | methionine synthase vitamin-B12 independent Tneu_0946 839509 - 840477 + | tRNA (guanine-N1-)-methyltransferase Tneu_0948 841087 - 840953 - | hypothetical protein Tneu_0949 841762 - 841112 - | radical SAM domain-containing protein Tneu_0950 842187 - 841759 - | hypothetical protein Tneu_0951 843380 - 842184 - | SufBD protein Tneu_0952 844044 - 843358 - | ABC transporter related Tneu_0953 844514 - 844089 - | PadR-like family transcriptional regulator Tneu_0954 844606 - 845508 + | 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase Tneu_0955 846243 - 845509 - | hypothetical protein Tneu_0956 846436 - 846846 + | hypothetical protein TERM 502 846865 - 846850 - f 73 -11.8 -2.98489 | overlap 846844 846847 GAAAAGATATAAGGA CCCCCG CCGG CGGGGG CATGAGGTACCCCGC TERM 503 847459 - 847419 - g 79 -7.6 -4.50976 | GCCGAGATCAGAAAA GCCCTAGACGCCCACG-GCT TCC ACCACGTGGGCATC-ATGGC ATACAGCGCCAAATA TERM 504 847831 - 847801 - g 78 -2.4 -5.10208 | overlap 847802 TAACCGCAATAAAAA GGGCAGGCGCAGAC TTA ATCCTCACCTACCA CGCCCCAGAAGCCGC Tneu_0957 846867 - 847877 + | porphobilinogen synthase TERM 505 847996 - 847975 - f 73 -9.3 -3.87869 | overlap 847976 847978 CCAATGGGGCACAAA CCACGCCGG GCCA CCGCCGCGG CATGCCGACGCCGCC TERM 506 848033 - 847976 - f 75 -12.6 -2.924 | gap 2, overlap 847975 847978 CAATGGGGCACAAAC CACGCCGGGCCACCGCCGCGGCATGCCG ACGC CGCCAC-CCGCGG-GCCGCCCCGACGCG CCCAACGGCCGCTAC TERM 507 848031 - 847978 - f 70 -11.6 -3.01125 | gap 2, overlap 847975 847976 ATGGGGCACAAACCA CGCCGGGCCACCGCCGCGGCATGCCG ACGC CGCCAC-CCGCGG-GCCGCCCCGACG CGCCCAACGGCCGCT Tneu_0958 848174 - 848524 + | hypothetical protein Tneu_0959 848521 - 848877 + | hypothetical protein Tneu_0960 848870 - 849028 + | hypothetical protein Tneu_0961 849568 - 849203 - | paREP9 TERM 508 850756 - 850737 - H 71 -4.4 -4.63479 | gap 1, opp_overlap 850740, overlap 850741 CACCAGAAATCAAAA GATAGTAGA AAC TCTAC-ATC TGTCCAGAACCTGTA TERM 509 851426 - 851441 + H 70 -11.8 -2.71144 | opp_overlap 851424 851425 AACGAACGAGAAAGG CGCCGC GGGG GCGGCG TGGTTGGACGAGCTA Tneu_0962 851887 - 852855 + | AsnC family transcriptional regulator Tneu_0963 853745 - 852852 - | molybdate metabolism transcriptional regulator Tneu_0964 853778 - 854692 + | binding protein, putative Tneu_0965 854682 - 855326 + | binding-protein-dependent transport systems inner membrane component TERM 510 855489 - 855459 - g 83 -15.4 -3.02144 | CCACCCTCCTGAAGA CCCTCGCCGGCCTC CTG AAGCCCGACGAGGG CGAGGTGTACATAGA Tneu_0966 855323 - 855931 + | ABC transporter related TERM 511 856080 - 856037 - T 88 -7.3 -5.05782 | gap 1, overlap 856052 856053 ATCCAGTTTAAAAAA CGGCGGGCAGAACAACGGCG GACGG CGCCGCCGACCT-CCAGCCA CACGCTTTCAACTGC TERM 512 856069 - 856052 - T 75 -9.8 -3.78934 | overlap 856037 856053 CGGCGGGCAGAACAA CGGCGG ACGGCG CCGCCG ACCTCCAGCCACACG TERM 513 857159 - 857130 - T 72 -10.7 -3.43109 | gap 1, overlap 857128 857133 GAGAGGATTGAAAGA GGAGAGCGG-CGTC GAC GACGTCCGCCCTTC CGGGGAACTTGGGAG Tneu_0967 857846 - 857502 - | HEPN domain-containing protein Tneu_0968 858757 - 857867 - | porphobilinogen deaminase TERM 514 858072 - 858091 + g 76 -10.6 -3.84825 | opp_overlap 858062, overlap 858084 AGGAAGGCCCTCTCG GCCGCCGC CTCC GCCGCGGC TTTCCTGTCGCTGGC Tneu_0969 859887 - 858754 - | radical SAM domain-containing protein TERM 515 859362 - 859384 + g 84 -3.2 -5.24129 | overlap 859359 859369 TGAAGCGGAGCCCCA CGTCGAGGCC GGC GGCGGTGGCG TTTTTTATCCCGGCG TERM 516 859698 - 859720 + g 72 -12.6 -2.99649 | CGGCGGTGGTGAGCT CGCGGGGGTC CTC GGCCCCGGCG TCTATGTAGCAGTGT TERM 517 860191 - 860144 - g 71 -7.5 -4.15833 | gap 1 ACCACGAGTCTAAAA CCGGCGTGGTGGCCATCGGCGA CTGCC CCGCCGTGGACCACCTC-CTGG AGAGGCTTAGGGAGT Tneu_0970 859978 - 861321 + | hypothetical protein Tneu_0971 861562 - 861287 - | ATP-cone domain-containing protein Tneu_0972 862474 - 861581 - | homoserine kinase Tneu_0973 863097 - 862471 - | cyclase family protein TERM 518 863164 - 863153 - R 70 -3 -4.72007 | opp_overlap 863153 GCCCAGCAAAACAAA TTTC TATA GAAA TATCTCACTTGTAAT TERM 519 863227 - 863207 - R 71 -7.5 -4.12942 | overlap 863208 863220 863221 TTAAATTTTTGAAAA CCCGTAGGT ACA ACCCACGGC GGTTGGCCGCCCCGG TERM 520 863226 - 863208 - R 71 -11 -3.07283 | overlap 863207 863220 863221 TAAATTTTTGAAAAC CCGTAGGT ACA ACCCACGG CGGTTGGCCGCCCCG TERM 521 863274 - 863220 - R 91 -17.8 -3.36175 | gap 2, opp_overlap 863252, overlap 863208 863207 863221 AACCCGTAGGTACAA CCCACGGCGGTTGGCCGCCCCGGGGG ACCCA CCCCCGGAG-GCCCACCCTCCG-GGG TTTGGGCGGCCGGCG TERM 522 863274 - 863221 - R 86 -18 -2.61383 | gap 1, opp_overlap 863252, overlap 863208 863207 863220 ACCCGTAGGTACAAC CCACGGCGGTTGGCCGCCCCGGGGG ACCCA CCCCCGGAG-GCCCACCCTCCGGGG TTTGGGCGGCCGGCG TERM 523 863252 - 863274 + r 93 -16.3 -3.53012 | opp_overlap 863220 863221 CCCCGGGGGACCCAC CCCCGGAGG CCCAC CCTCCGGGG TTTGGGCGGCCGGCG Tneu_0974 864641 - 863325 - | amino acid permease-associated region TERM 524 863985 - 863946 - G 77 -12 -3.63515 | overlap 863918 CCCCAGGCCGAAGAA GGCGCCCACCGCCACGAC CAGC GCCGTGGCCTTCGGCACC TGGACCAGGGGCTCC TERM 525 864638 - 864660 + g 71 -7.6 -4.09542 | AGCTCCTCGCCAGCG CCACGGCGCA CGC TACGCGGTGG TTTATATACATCTTT Tneu_0975 864700 - 865725 + | egghead-like protein Tneu_0976 866562 - 865885 - | ABC transporter related TERM 526 865988 - 866039 + g 72 -13 -3.05384 | opp_overlap 866004, overlap 866005 CTCAGTCGGCCCTCC TCCATGACGCATATGACGTCGCCT ATGT AGGCGGCTTCGTAGGGGTCGTGGG TTACGTAGAGGACGG TERM 527 866166 - 866137 - G 82 -14.9 -3.21099 | opp_overlap 866135 CTCGTCCATGAGGAA GCCGCAGGCCCCC GCCA GGAGGCCCGCCGC GATGTTGACAAGCTG Tneu_0977 867248 - 866547 - | sulfate ABC transporter, permease protein, putative TERM 528 866759 - 866746 - G 71 -9.5 -3.83066 | overlap 866741 866738 AAGGACAGCAGGAAA GCGGC CGCG GCCGC CCTCCTCAGCGAGAG TERM 529 866952 - 866934 - G 90 -5.9 -5.24129 | opp_overlap 866942 CTTGTTCACAAAAAA GCCGTAG AGCCA CTCCGGC AGGAGGGGGTTCCTA TERM 530 867163 - 867138 - G 73 -9.7 -3.98214 | gap 1 AGCAGTGAGGAGAAA CACCTCCG-CGA ACC CCGGCGGAGGCG CCCCCAGGTAGGCAA Tneu_0978 867473 - 869542 + | periplasmic binding protein Tneu_0979 869562 - 870380 + | modD protein TERM 531 870398 - 870382 - f 73 -9.3 -3.87815 | opp_overlap 870391 TGGCACCTTTATAAA GGGCCGC GCC GCGCCCC ACGTGATTACACACG TERM 532 871104 - 871092 - f 70 -3.3 -4.82901 | CCGGCCTCAGAAAAA CGCTG AGA CAGAG GAGGGAGGGGCCCTG TERM 533 872191 - 872175 - f 84 -13.7 -3.59979 | GCCGCCTACGCCAAA GCCCTCC TCC GGAGGGC CGCCGGCGTGGACGG Tneu_0982 873552 - 874061 + | hypothetical protein Tneu_0983 874301 - 874867 + | hypothetical protein Tneu_0984 874870 - 875649 + | hypothetical protein TERM 534 876349 - 876366 + G 76 -7 -4.46212 | GGCGTTTTTAGTAGG GGCCTT TGGGGT AAGGCC TTTTGTCGTGGCCAC TERM 535 876739 - 876715 - g 76 -13.7 -3.01712 | opp_overlap 876680, overlap 876726 CGCCGGCCTGGAACA CCTCTTGAAGA CCC TCCTCAAGAGG AGCTAGCGGCAGCTA Tneu_0985 875639 - 876745 + | peptidase S26B, signal peptidase Tneu_0986 877125 - 876742 - | hypothetical protein Tneu_0987 877400 - 877125 - | AsnC family transcriptional regulator TERM 536 877653 - 877680 + r 70 -10.5 -3.30243 | gap 1, overlap 877676 CCGGGCCTCTACCAC GCGCC-CCGCGG ATATC CCGCGGCGGGGC TTCTCCAAGGTCCCT Tneu_0988 878033 - 877695 - | DNA polymerase beta subunit Tneu_0989 878427 - 878017 - | HEPN domain-containing protein TERM 537 878485 - 878456 - H 76 -5 -4.72986 | overlap 878457 878475 CACCGCTATTAAAAA CCTCATCGCTGT GTACAA ACATCGACGAGA TGCCTCCGAGTCCTC Tneu_0990 878748 - 879059 + | hypothetical protein TERM 538 879555 - 879521 - f 81 -13.4 -3.28712 | opp_overlap 879551, overlap 879524 879526 CCGGCGGTGGGATAA GCACACCCCCCGCCCG GCG CGGCCGGGAGGCGCCC CCTCAGCCTGACGCC TERM 539 879552 - 879524 - f 82 -15.9 -2.82623 | opp_overlap 879551, overlap 879521 879526 GCGGTGGGATAAGCA CACCCCCCGCCCG GCG CGGCCGGGAGGCG CCCCCTCAGCCTGAC TERM 540 879550 - 879526 - f 82 -14.9 -2.96274 | overlap 879524 879521 GGTGGGATAAGCACA CCCCCCGCCCG GCG CGGCCGGGAGG CGCCCCCTCAGCCTG Tneu_0991 879582 - 880307 + | hypothetical protein TERM 541 880568 - 880602 + F 79 -9.2 -4.25104 | gap 1, overlap 880569 ACGCAGGCGACGGGG CCCGCGGCGGAGGCG TTGAGT CGC-TCCGCGGCGGC TTTTGCTAAAAGCGG TERM 542 880569 - 880601 + F 75 -12.7 -3.14848 | gap 1, overlap 880568 CGCAGGCGACGGGGC CCGCGGCGGAGGCG TTGAGT CGC-TCCGCGGCGG CTTTTGCTAAAAGCG TERM 543 880632 - 880614 - f 73 -8 -4.07568 | CGGCTTTTGCTAAAA GCGGCTGG GGG CCCACCGC GGCGGCCTGGAGCGC TERM 544 882927 - 882908 - f 77 -3.4 -5.16572 | overlap 882920 882923 ATCCAATTTAAAAAA CGGCGGAC AGAA GTACGGCG GACGGCGACGCCGAC Tneu_0993 885844 - 886161 + | hypothetical protein Tneu_0994 886164 - 887096 + | CRISPR-associated autoregulator DevR family protein protein Tneu_0995 887093 - 887875 + | CRISPR-associated Cas5 family protein TERM 545 888548 - 888560 + G 100 -10.5 -4.72986 | overlap 888545 GCTTTCTAGGATGCG CCGCG TTG CGCGG TTTTTCGTCGAGCTC Tneu_0996 887862 - 888785 + | hypothetical protein Tneu_0997 888778 - 890253 + | CRISPR-associated helicase Cas3 Tneu_0998 890250 - 890819 + | CRISPR-associated HD domain-containing protein TERM 546 891118 - 891134 + G 77 -11.5 -3.62046 | opp_overlap 891118 891117 891115 TGAGCCGAAAGACAT CGGGGCG AAC CGCCTCG TTCTTGAAACCGTAA Tneu_0999 890816 - 891565 + | CRISPR-associated Cas family protein Tneu_1000 892609 - 891704 - | hypothetical protein TERM 547 892373 - 892315 - G 85 -12.4 -3.73224 | overlap 892318 TTATGTCGTAGCAAA CCA-GCCCCCTCCCGCGGTAGAGCCCGG CGGAC CCCGGC-CTCCCGCAGAAGGTGGCGTAG GGGCAAGTCAGAACC TERM 548 892369 - 892318 - G 81 -16.5 -2.96695 | gap 1, overlap 892315 TGTCGTAGCAAACCA GCCCCCTCCCGCGGTAGAGCCCGG CGGAC CCCGGC-CTCCCGCAGAAGGTGGC GTAGGGGCAAGTCAG Tneu_1001 892638 - 894062 + | ATPase TERM 549 895193 - 895179 - g 73 -4.2 -4.66609 | GAGGCCAGGGAAAAA CACATC GGC GAGGTG ATGAGGTTGCTGGAG Tneu_1002 894066 - 895220 + | hypothetical protein Tneu_1003 895248 - 895592 + | hypothetical protein TERM 550 895637 - 895594 - f 73 -8.9 -3.93262 | gap 2 CGGTAAGAGATTAAA GCCCCCCTCTTCTCCCCCCTA TGCT TAGGGTGGAG-AG-GCAGGGC CCCGTGGCTAGGCTG Tneu_1004 895614 - 895817 + | hypothetical protein Tneu_1005 897881 - 895986 - | metallophosphoesterase TERM 551 896771 - 896784 + g 75 -2.3 -4.87665 | overlap 896762 CTTTGGCGCCTTGGG CCACG ACGG CGTAG TTTTTGTAGGTGAGG Tneu_1006 899155 - 897878 - | hypothetical protein Tneu_1007 899278 - 900735 + | extracellular solute-binding protein Tneu_1008 902552 - 900750 - | binding-protein-dependent transport systems inner membrane component Tneu_1009 903592 - 902549 - | ABC transporter related TERM 552 904698 - 904733 + G 76 -12.5 -3.29461 | AGCAGGGGGAGGTGG CGCTGGTGGCCGTGG GGCCCG CCACGGTCTTCGGCG TTGTGCAGGCGGTTA Tneu_1010 903656 - 904891 + | protein synthesis factor GTP-binding Tneu_1011 904985 - 905458 + | NUDIX hydrolase Tneu_1012 906580 - 905459 - | hypothetical protein TERM 553 906512 - 906491 - G 73 -10.1 -3.63515 | GGCCAGCGCCAAGAA GGCCACGAA GACG CCCGTGGCC GCAAGTGCCGACCTC Tneu_1013 908552 - 906561 - | hypothetical protein TERM 554 906858 - 906889 + g 89 -15.8 -3.27525 | overlap 906851 906853 CTGTATCGCCCCCAA CGGGGGCGGGGGTC TTAC GACCCTCGCGCCTG TTACATTTACAACGA TERM 555 907473 - 907452 - G 76 -8.7 -4.07568 | GCCGTTTCCCGAAAA TCTGACGGG CGTC CCCGTGAGA GAGGCCGCGCCGTCG TERM 556 908122 - 908096 - G 70 -10.8 -3.52941 | opp_overlap 908102, overlap 908118 AAACCCTAAGCAGAA CCCTCCCCCTGG CCC CCAGATAGAGGG AGCCCACCGCCTCCG Tneu_1014 909024 - 908545 - | hypothetical protein TERM 557 908912 - 908923 + g 83 -2.2 -5.26316 | TCGCGGTATATATAG TCGG CCAG CTGA TTTTTTATAGCGTCG Tneu_1015 909327 - 909043 - | hypothetical protein Tneu_1016 909372 - 910427 + | wyosine base formation domain-containing protein Tneu_1017 911067 - 910420 - | secreted endonuclease-like protein TERM 558 911190 - 911235 + G 77 -10.9 -3.61517 | overlap 911230 CGCGTCGACGCTCGC GGGCTTCGCGGCTGGCGTGGC AGGC GCTGTCCCGGCCGCGGCGGCC TTCTTCACAGCCGCT TERM 559 911662 - 911631 - g 73 -9.2 -3.85698 | overlap 911614 CGCGCTGGCCATAAA GGCGGGCGGGGCGC TTAC GCTCGCCGGCCACC TCATCATGTATCTAG Tneu_1018 911122 - 911700 + | hypothetical protein Tneu_1020 912055 - 912474 + | NUDIX hydrolase Tneu_1021 912611 - 913324 + | ABC transporter related TERM 560 914375 - 914391 + G 76 -5.7 -4.72272 | overlap 914372 CGGCCGTGTTGTACG CGCCCTG GGC CGCGGCG TTTTTGATCCAGAGC Tneu_1022 913321 - 914796 + | hypothetical protein Tneu_1023 915287 - 914787 - | PaREP1 family protein Tneu_1024 915320 - 915610 + | hypothetical protein TERM 561 915949 - 915891 - T 75 -5.7 -4.56597 | gap 2, opp_overlap 915943 915945 915947 915947, overlap 915893 CGGCTGTTGCAAAAA TACGTTGCGCCCCGCCCGAGGACCCCGGC GCC ACCGCG-CCCCCAGGCGGGGCTCT-CGGC CGGGGGAGGGGCGCC TERM 562 915947 - 915893 - T 89 -12.7 -3.90048 | gap 2, opp_overlap 915943 915945, overlap 915891 GCTGTTGCAAAAATA CGTTGCGCCCCGCCCGAGGACCCCGGC GCC ACCGCG-CCCCCAGGCGGGGCTCT-CG GCCGGGGGAGGGGCG Tneu_1025 917346 - 915982 - | ATPase Tneu_1026 918905 - 917595 - | hypothetical protein TERM 563 917964 - 917984 + g 70 -12.5 -2.8805 | CTCGGCTATCTCCCT GGCGAGGGC TGC GCCGTCGCC TGTGTACACGATGAT TERM 564 918223 - 918206 - G 78 -14.1 -3.13403 | overlap 918204 TGTCGGCCACCAACA CGGGCGC CAGC GCGCCCG TCGTCACGTTTAGCC Tneu_1027 918961 - 919569 + | methyltransferase small Tneu_1028 920924 - 919563 - | pyridoxal-phosphate dependent TrpB-like enzyme TERM 565 920153 - 920118 - G 72 -11 -3.41126 | overlap 920110 GTAGAAAGGCCAGAA GAGGCCCGAGAAGGAG CTGC CGCCTCCGCAGGCCCC CACCACGTAGTCTGG Tneu_1029 920951 - 921973 + | band 7 protein Tneu_1030 921970 - 922302 + | hypothetical protein Tneu_1031 922850 - 922308 - | hypothetical protein Tneu_1032 922936 - 923475 + | peptidase S26B, signal peptidase Tneu_1033 923494 - 924447 + | daunorubicin resistance ABC transporter ATPase subunit Tneu_1034 924444 - 925214 + | ABC-2 type transporter Tneu_1035 925563 - 925201 - | hypothetical protein Tneu_1036 925939 - 925535 - | hypothetical protein Tneu_1037 926256 - 925933 - | hypothetical protein TERM 566 926307 - 926330 + H 80 -5.2 -4.95758 | gap 1, overlap 926308 926318 GGTGGGGACGCCGCG TGTGGGCCGGC CCC GCCGGCA-ACG TTTTTATGGTGTAGT Tneu_1038 926358 - 926993 + | superoxide dismutase TERM 567 927330 - 927282 - g 76 -15.1 -2.64422 | ACATAGCCTACAGGA GGGCCCTCGACAGCGGCCTCTAC ATC GCCGAGGCCGAGGTGGAGTGCCC CGGGAGGCTGGAGGC Tneu_1039 927113 - 927520 + | zinc finger SWIM domain-containing protein Tneu_1040 927504 - 927914 + | hypothetical protein Tneu_1041 927935 - 928354 + | hypothetical protein Tneu_1042 930646 - 928346 - | hypothetical protein Tneu_1043 932076 - 930679 - | hypothetical protein Tneu_1044 932498 - 932172 - | hypothetical protein Tneu_1045 932859 - 932617 - | hypothetical protein TERM 568 932857 - 932882 + g 70 -4.1 -4.60808 | opp_overlap 932868, overlap 932859 932861 CCACTTCCACCAGCC CATATGTGAAA CGTG TTTCACATGTA TTTATGTTTTTCTAC Tneu_1046 933226 - 932894 - | hypothetical protein Tneu_1047 933648 - 933226 - | hypothetical protein TERM 569 933462 - 933487 + g 71 -5.3 -4.35044 | overlap 933448 GGCACTCCTCGCAGG GGAGGGCCTCG GGCT TGGGGTGCTCC TTTATCTTTAGGTCG Tneu_1048 934591 - 933671 - | hypothetical protein Tneu_1049 934713 - 935201 + | hypothetical protein Tneu_1050 935208 - 936263 + | amidohydrolase Tneu_1051 936450 - 936241 - | ribosomal protein L24, conjectural Tneu_1052 937213 - 936434 - | thiazole biosynthesis enzyme Tneu_1053 937899 - 937315 - | formate dehydrogenase protein FdhE Tneu_1054 938590 - 937883 - | formate dehydrogenase, cytochrome b556 subunit (formate dehydrogenase gamma subunit) Tneu_1055 939463 - 938624 - | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Tneu_1056 942972 - 939466 - | formate dehydrogenase TERM 570 942700 - 942674 - G 73 -10 -3.58343 | opp_overlap 942686 942687 TCCACGAGCTGGAAA GCCGCCTTGCCC TTG GGGCACAGCGCC CCCCAGTTTATGTAG Tneu_1057 943175 - 942969 - | hypothetical protein Tneu_1058 943908 - 943231 - | formate dehydrogenase delta subunit Tneu_1059 944378 - 943893 - | hypothetical protein Tneu_1060 944799 - 944410 - | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Tneu_1061 945362 - 944796 - | hypothetical protein Tneu_1062 949315 - 945359 - | molydopterin dinucleotide-binding region TERM 571 947095 - 947105 + g 78 -2.4 -5.07486 | TTAGCAGATCCTCCA CTGG CTT CCCG TTTTTCTTAGCCATA TERM 572 948653 - 948679 + g 71 -6.5 -4.21908 | CGAGCCTATGGGGTT GCCCTCGACGA AGTAC TCGTAGAAGGC TTTTGCGTAGTAGTC TERM 573 949265 - 949235 - G 93 -14.6 -3.86897 | opp_overlap 949244, overlap 949236 CTGAGCTTTTACAAA GGCGCCGGCGGCGA TCC CCACCGCCATCGCC GCGGCGCTCGCCTTT TERM 574 949272 - 949236 - G 79 -14.4 -2.91924 | gap 1, opp_overlap 949244, overlap 949235 TGAGCTTTTACAAAG GCGCCGGCGGCGATCCC CACC GCCATCGCCGC-GGCGC TCGCCTTTAGGAAGT Tneu_1063 950034 - 949312 - | hypothetical protein Tneu_1064 950911 - 950039 - | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein TERM 575 950249 - 950261 + g 71 -9.1 -3.75629 | TGCGCCGGGCTGCAG CGCAG GGT CTGCG TTTGGGTTCCAGGTG Tneu_1065 951012 - 951440 + | hypothetical protein Tneu_1066 953174 - 951411 - | tetratricopeptide TPR_4 Tneu_1067 954018 - 953164 - | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Tneu_1068 954538 - 954002 - | uncharacterized component of anaerobic dehydrogenase Tneu_1069 954622 - 955314 + | hypothetical protein Tneu_1070 955295 - 956293 + | hypothetical protein TERM 576 956577 - 956630 + F 85 -14.3 -3.38522 | gap 1, overlap 956580 956583 956587 956588 GCTCGGCCGTTGCCC GGGGGCCGCGGCGGAGCGG-GCACCG CGG CGGGGCGTCCCCCCGCCGGGGCCATC TTGCGTGTTTTTTTG TERM 577 956580 - 956627 + F 85 -16.8 -2.52112 | gap 1, overlap 956577 956583 956587 956588 CGGCCGTTGCCCGGG GGCCGCGGCGGAGCGG-GCACCG CGG CGGGGCGTCCCCCCGCCGGGGCC ATCTTGCGTGTTTTT TERM 578 956583 - 956637 + F 91 -5.7 -5.40072 | gap 4, overlap 956580 956577 956587 956588 CCGTTGCCCGGGGGC CGCGGCGGAGCGGGCACCGCGGCGGGG CGTCC CCCCGCCG-GG-GCCATCT-TGC-GTG TTTTTTTGGGCGGCC TERM 579 956588 - 956635 + F 77 -8.4 -4.34482 | gap 3, overlap 956580 956577 956587 956583 GCCCGGGGGCCGCGG CG-GAGCGGGCACCGCGGCGGGG CGTCC CCCCGCCG-GG-GCCATCTTGCG TGTTTTTTTGGGCGG TERM 580 956759 - 956793 + F 100 -13.5 -5.252 | gap 1, opp_overlap 956750 956758 GTAAGAGCCGAAGAC CTGCCCGCCCGCCGGC CACG GCCGG-GGGCCGTCAG TTTTTTATAAGGCTC Tneu_1071 956823 - 957776 + | hypothetical protein Tneu_1072 958868 - 957897 - | hypothetical protein Tneu_1073 959478 - 958888 - | TenA family transcription regulator Tneu_1074 960103 - 959465 - | TenA family transcription regulator TERM 581 959539 - 959559 + g 79 -12.5 -3.53012 | opp_overlap 959528, overlap 959540 959545 959549 AGTAGGGCCAGAGGG CCTCCGGCG GCG CGCCGGAGC TTTCCAGCAGGGCGC TERM 582 959540 - 959558 + g 79 -16 -2.71712 | overlap 959539 959545 959549 GTAGGGCCAGAGGGC CTCCGGCG GCG CGCCGGAG CTTTCCAGCAGGGCG TERM 583 960486 - 960533 + G 100 -16.2 -4.08767 | gap 1, opp_overlap 960485, overlap 960487 ACCTCCGTGATCAAC TTCGGCGTGGGGGGCG-AGGTGG GGC CGGCCTACGCCGCCCTCGCCGAG TTTTCGCCGCCTAGG TERM 584 960487 - 960532 + G 87 -17.5 -3.05046 | gap 1, opp_overlap 960485, overlap 960486 CCTCCGTGATCAACT TCGGCGTGGGGGGCG-AGGTGG GGC CGGCCTACGCCGCCCTCGCCGA GTTTTCGCCGCCTAG Tneu_1075 960159 - 961412 + | major facilitator transporter Tneu_1076 962557 - 961409 - | major facilitator transporter TERM 585 961954 - 961998 + g 86 -14.9 -3.28791 | gap 1, overlap 961941 961955 GCCTAGCCTCAACCG GGGCGGCCC-CCCGGGGGGC TGGCTT GTGCTCCGGGAGGGCGGCCC TTATCACCGCGGCGT Tneu_1077 962639 - 963520 + | ArsR family transcriptional regulator Tneu_1078 963548 - 964408 + | ABC transporter related Tneu_1079 964395 - 965114 + | ABC-2 type transporter Tneu_1080 965455 - 965111 - | GTP cyclohydrolase I Tneu_1081 965554 - 966696 + | AAA ATPase TERM 586 966875 - 966900 + G 86 -14.7 -3.31144 | gap 1, opp_overlap 966857 GACCCTTGAGGGGGG CGCCGC-GGCGG CTC TCGCCGGCGGCG TTGTGGCGGTGGGCG Tneu_1082 966699 - 967832 + | dihydroorotase, multifunctional complex type Tneu_1083 967880 - 968218 + | siroheme-sulfite reductase gamma subunit-like protein Tneu_1084 969393 - 968215 - | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein TERM 587 968985 - 968999 + g 72 -12.8 -3.00907 | opp_overlap 968980 968983 968982 CGTAGAGGAACACCC GGGGGG CCT CCCCCC TCTCCTTCTCTATGG TERM 588 969900 - 969922 + G 79 -16.2 -2.82635 | CTGGCGTGGTCCTGG CCCGCCTCGC CCA GCGCGGCGGG TCTCCTCCTGGCCGT Tneu_1085 969483 - 970061 + | hypothetical protein TERM 589 970281 - 970301 + G 81 -13.9 -3.36327 | opp_overlap 970269 TGACGGAGCTGGAGA GCCTCCCCG TTC CGGGGCGGC TTATGGATAGGATGA TERM 590 970567 - 970551 - g 72 -12.3 -3.05935 | AGAGCGTCCAGGCAA CTGCACG CGC CGTGCAG TGCCTCCTGGAGGAG Tneu_1086 970076 - 970651 + | hypothetical protein Tneu_1087 970652 - 971575 + | ABC transporter related Tneu_1088 972982 - 971567 - | putative thiamine transport system permease protein TERM 591 972730 - 972696 - G 76 -10.7 -3.83026 | gap 1 GGCCCGTACATGAAA TCG-CCGTGGAGGCGC GCCA GCGCGTCCACCGTCGA GAGCGCCGGCGCGAA TERM 592 972972 - 972956 - G 72 -2.1 -4.72986 | overlap 972958 CAGGGCTAGGAAAAA GAGGGCT GGA AGCCCGT GCGGCTTCACCCAGA TERM 593 972970 - 972958 - G 73 -9.1 -3.98256 | overlap 972956 GGGCTAGGAAAAAGA GGGCT GGA AGCCC GTGCGGCTTCACCCA Tneu_1089 973995 - 972979 - | ABC transporter periplasmic-binding protein TERM 594 973066 - 973087 + g 70 -5.1 -4.56597 | gap 1, overlap 973063 973069 GACGACGACGGACTG CGGCCTCGGG AGG CCC-AGGTTG TTTTTAACCACGGCG TERM 595 973069 - 973084 + g 71 -5.4 -4.40561 | gap 1, overlap 973063 973066 GACGACGGACTGCGG CCTCGGG AGG CCC-AGG TTGTTTTTAACCACG TERM 596 973180 - 973207 + g 79 -7.6 -4.56597 | opp_overlap 973180, overlap 973182 CGCGAATTTGACGAA CTCCAGGGCCAG GTCC CTGTTCCTGGCG TTTTTCAACACGGCC TERM 597 973801 - 973816 + g 70 -10.4 -3.55761 | CACCGCCCCCCCAAG CGCCAC AAAG GTGGCG TTTACCCCATACCTC Tneu_1090 976313 - 974091 - | translation elongation factor aEF-2 TERM 598 976079 - 976067 - G 70 -4.8 -4.44046 | CGTACTCGAAATAAA GCGA TATGT TCGC CGCCTTGACCGTCAT Tneu_1091 976993 - 976337 - | ABC transporter related Tneu_1092 977900 - 976977 - | transport system permease protein TERM 599 977407 - 977354 - G 76 -13.5 -3.00022 | opp_overlap 977395 GCGAGTTTAGATACA CCGCCGCCAGGAGGAGGGCGGCCGC CCCA GCCACGGCCCACCCCAGGGCGCCGG GGGGGTAGGCCCCGT TERM 600 977880 - 977867 - G 77 -3.7 -5.00616 | overlap 977868 GCTCGGCGGAAAAAA GGAGG GGGG CCGCC AGGAGGAGGAGCCGC Tneu_1093 979183 - 977897 - | periplasmic binding protein TERM 601 978127 - 978137 + g 75 -2.4 -4.98255 | opp_overlap 978125 978127, overlap 978125 TTGACCAGATCAAGA CGTC TAC GTCG TTTTTGTGCTTCAGC TERM 602 979160 - 979125 - G 100 -18.3 -4.3739 | gap 1, overlap 979126 979127 TACGTCTGTACAAAA GC-CGCCGCGGCGACG GCCAG CGCCACCGCGGCGAGC AGGTAGGCGAGCCTG TERM 603 979158 - 979126 - G 90 -18.4 -3.22113 | overlap 979125 979127 ACGTCTGTACAAAAG CCGCCGCGGCGACG GCCAG CGCCACCGCGGCGA GCAGGTAGGCGAGCC TERM 604 979157 - 979127 - G 88 -19.7 -2.52946 | overlap 979126 979125 CGTCTGTACAAAAGC CGCCGCGGCGACG GCCAG CGCCACCGCGGCG AGCAGGTAGGCGAGC Tneu_1094 980446 - 979202 - | peptidase M16 domain-containing protein Tneu_1095 981810 - 980449 - | hypothetical protein Tneu_1096 983030 - 982059 - | alcohol dehydrogenase Tneu_1097 983128 - 983604 + | hypothetical protein TERM 605 984678 - 984668 - g 72 -2.4 -4.7254 | opp_overlap 984668, overlap 984654 AGCCGGCATTAAAAA CGCC GTC GTCG TTGATATAAACGCGC TERM 606 984742 - 984720 - g 71 -8.5 -4.03234 | gap 1 TCTGCTCTAGATAAA TCGCTTGGGC TAAC GCCCAA-CGA TATGGCAAGCGCGGA TERM 607 984978 - 984966 - g 81 -5.5 -4.75219 | GAACTATCAAGAAAA CTAGG CAT CCCAG CGCCGACAAAAGCGT Tneu_1098 983601 - 985115 + | hypothetical protein Tneu_1099 985277 - 986101 + | ABC transporter related Tneu_1100 986098 - 986838 + | ABC-2 type transporter Tneu_1101 986844 - 987161 + | ArsR family transcriptional regulator Tneu_1102 987167 - 987478 + | hypothetical protein Tneu_1103 987475 - 987594 + | hypothetical protein TERM 608 987819 - 987794 - g 81 -8.1 -4.58395 | overlap 987795 CGTAGCCCTCAAAAA CGCCGTCGTCC AGCG GGTCGCCGGCA GGCGAGTCAAACTCT TERM 609 988019 - 988003 - g 85 -2.9 -5.35222 | AAAAGCCAGAAAAAA TCGCCGA ACA CCAACGA GGACGCCCACAGACG Tneu_1104 987594 - 988043 + | hypothetical protein Tneu_1105 988263 - 988547 + | hypothetical protein TERM 610 989093 - 989061 - g 72 -12.8 -3.04269 | opp_overlap 989081 CGGATACGACAGATA CGG-CCTGCCGGCCAC GGG GTG-CCGGCAGGGCCA CTGCGGCTTCTACGA TERM 611 989653 - 989636 - g 76 -6.3 -4.6645 | gap 1 TAGACATAGAGAAAA TGGCACAG GAC CTG-GCCA CCGCCGAAGACATCA Tneu_1106 988630 - 989748 + | hypothetical protein Tneu_1107 989814 - 990191 + | hypothetical protein Tneu_1108 993169 - 990179 - | hypothetical protein TERM 612 993234 - 993216 - R 82 -8 -4.57341 | overlap 993217 AACGCCCCGCAAAAA CGCGGCGG GCG CCACCGCC AGGCGGGAGCCTGCG TERM 613 993233 - 993217 - R 74 -11.5 -3.33922 | overlap 993216 ACGCCCCGCAAAAAC GCGGCGG GCG CCACCGC CAGGCGGGAGCCTGC Tneu_1109 993750 - 993385 - | paREP9 TERM 614 995043 - 995023 - R 70 -11.1 -3.02144 | CGATCCTGCCCAACA CCGCCATGG CGA CCATGGCGT CCAGAAATCAAAAAA TERM 615 995073 - 995059 - R 84 -2.8 -5.42514 | overlap 995061 CCAGAAATCAAAAAA TAGTAG AAA CAACTA CACGATGATTCATAT Tneu_1110 996687 - 995509 - | phosphoadenosine phosphosulfate reductase TERM 616 995779 - 995799 + g 71 -8.9 -3.75169 | GTAGAATATCTTCCT GCCGGCGAG CTC TTCGGCGGC TTTGATGGCGTGGTA TERM 617 995849 - 995866 + g 78 -6.9 -4.65838 | overlap 995842 995860 GCGTTGAGGGGGCCC CACCTGC TGTA GCCGGTG TTTTTCGGCTCTCTG Tneu_1111 996792 - 997895 + | methyltransferase type 11 Tneu_1113 999817 - 998363 - | hypothetical protein Tneu_1112 997876 - 998424 + | methyltransferase type 11 Tneu_1114 1001363 - 999807 - | hypothetical protein TERM 618 1000142 - 1000104 - G 88 -13.3 -3.56643 | gap 2, opp_overlap 1000136, overlap 1000119 TTCATATCTGCCAAA GAGCGCAGGCGAAAACACC TTC GGTGCTT-CGCCCGC-CTC CGGGTAGGGGAGGCC Tneu_1115 1001447 - 1002745 + | hypothetical protein Tneu_1116 1002733 - 1003806 + | hypothetical protein Tneu_1117 1003873 - 1004259 + | hypothetical protein TERM 619 1005065 - 1005092 + GF 78 -12.7 -3.31799 | overlap 1005077 CTCCGTCTACATCCC CGCCGAGAGGA TCGCTC TCCTCACGGCG TTCTACGGGGTTGTG TERM 620 1005141 - 1005167 + GF 70 -3.6 -4.60255 | TACGGGGTGAGCCAA CTGGTTAGGGAG GAG CTTCCCAGGCAG TTTTTCAAGCCTTCT Tneu_1118 1004487 - 1005746 + | hypothetical protein Tneu_1119 1005718 - 1006098 + | hypothetical protein Tneu_1120 1006924 - 1006259 - | hypothetical protein TERM 621 1006717 - 1006742 + g 89 -16.9 -3.14132 | gap 1, opp_overlap 1006682 1006681 1006679 GCCCCCGGCGCCGCA GGAGGCGG-GCG AGG CGCTCCGCCTCC TTCCTGACCCAGCCC Tneu_1121 1007521 - 1006955 - | hypothetical protein Tneu_1122 1007920 - 1007543 - | paREP8 Tneu_1123 1010325 - 1007929 - | hypothetical protein TERM 622 1008340 - 1008322 - G 81 -13.8 -3.3506 | overlap 1008313 GCTAAAGGCGCACAA GAGGGCGG CGG CCGCCCCC CTCAACCCCCCATCC TERM 623 1008756 - 1008741 - G 70 -3.2 -4.69053 | GATCAGGGAACAAAA TACGCC AACC GTCGTA AGTATTTAAAGATAA TERM 624 1009229 - 1009199 - G 75 -2.8 -4.99312 | AATATAAGAATAAAA TTATAACTAAAAAT CAA AATTTTATTTATAA TATCAGCAATTTTCA TERM 625 1009354 - 1009364 + g 72 -2.6 -4.8667 | AAAAAAATTTAATGG TAAT CTT ATTA TTTTTATAAGGTCTG TERM 626 1010159 - 1010130 - G 80 -10.7 -4.13945 | gap 1, overlap 1010116 1010113 ACCCCGACGGCAAAA CGGCGTAGG-GGTA GCC CACCGCCTCCGCCG CCCCGCTACAGTTCC TERM 627 1011243 - 1011229 - H 70 -3.4 -4.74706 | overlap 1011230 CGCAAGACTTAAAAA CGCCAC GTT GCGGCT GGATATGCGCTTTCT TERM 628 1012326 - 1012336 + G 72 -2.6 -4.78981 | TTTTGTCAGTTCCAG TAAT TAT ATTA TTTCTTTTAGTTCCT TERM 629 1012662 - 1012672 + G 75 -2.6 -4.96427 | TAGTTTCTTTAAATT TATT TTT AATA TTTCTTTTATTATTA Tneu_1125 1011248 - 1013776 + | hypothetical protein TERM 630 1015814 - 1015771 - g 76 -12.2 -3.36273 | GCGGGTGAAGATTAA CGCCACCGGCACCCCCGCCA TGAC CGTCGGGGGGACAGGCGACG TGCTCACCGGCGTCG TERM 631 1015874 - 1015852 - g 76 -14.8 -2.50016 | opp_overlap 1015873, overlap 1015851 1015849 GTTTATGACCAAGAC CCGCGACCCC CTG GAGGCCGCGG CCGTGGCGGCCTTCG Tneu_1126 1014506 - 1016020 + | carbohydrate kinase, YjeF related protein Tneu_1127 1016080 - 1016475 + | hypothetical protein TERM 632 1016754 - 1016784 + G 83 -16.1 -3.01712 | gap 1, opp_overlap 1016740 ATGGCCAGCCAGTTC GCCGC-GGCCGCCG CCGG CGGCGGCCTGCAGC TCTTCGGCGCCAGGC Tneu_1128 1016502 - 1017302 + | CRISPR-associated Cas family protein TERM 633 1017303 - 1017285 - f 74 -3.2 -5.00642 | overlap 1017286 CAACCCACAGAAAAA CCTACATA CCC TATATAGA TCACGGCGTTTATAA TERM 634 1017451 - 1017408 - f 88 -7.3 -5.05782 | gap 1, overlap 1017423 1017424 ATCCAGTTTAAAAAA CGGCGGGCAGAACAACGGCG GACGG CGCCGCCGACCT-CCAGCCA CACGCTTTCAACTGC TERM 635 1017440 - 1017423 - f 75 -9.8 -3.78934 | overlap 1017408 1017424 CGGCGGGCAGAACAA CGGCGG ACGGCG CCGCCG ACCTCCAGCCACACG TERM 636 1019263 - 1019294 + G 80 -3.7 -5.1286 | overlap 1019264 1019265 TGAGAATTTTGGCGT TATTAGGGAGCTC AATGTG GAGCTTCCTGAGG TTTTTCTGCTTTTTG Tneu_1129 1019234 - 1020262 + | hypothetical protein Tneu_1130 1020745 - 1020308 - | hypothetical protein TERM 637 1020501 - 1020511 + g 76 -6.8 -4.46926 | TTGGTCTTTATGTGG CTCG TGT CGAG TTTTGTGGTGAACTC Tneu_1131 1021599 - 1020742 - | hypothetical protein Tneu_1132 1022694 - 1021609 - | hypothetical protein Tneu_1133 1023371 - 1022691 - | CRISPR-associated HD domain-containing protein Tneu_1134 1025068 - 1023368 - | CRISPR-associated helicase Cas3 Tneu_1135 1025738 - 1025058 - | CRISPR-associated Cas5 family protein Tneu_1136 1026721 - 1025738 - | CRISPR-associated autoregulator DevR family protein protein Tneu_1137 1027167 - 1026724 - | hypothetical protein Tneu_1138 1027875 - 1027204 - | CRISPR-associated DNA-binding protein TERM 638 1028132 - 1028116 - g 78 -13.7 -3.16564 | GCCCCAGCCCACCAA GCCCCTC GCC GAGGGGC AGGCCCTACACGCCG Tneu_1139 1027892 - 1028728 + | CRISPR-associated RAMP Csa1 family protein TERM 639 1028884 - 1028858 - g 76 -12.2 -3.39327 | GCGGCATATCCATAA CGACGAGGGCGC TCA GGGCCCTCCTCG CCGCCGGGGCCACAG TERM 640 1029186 - 1029147 - g 70 -12.9 -2.87683 | gap 2 ACAGGCGCTGAGAGA CGCCGCCTC--CCCCCACG CTGT CTTGGAGGCCGAGGCGGCG GCCGCCGAGGCCTAC Tneu_1140 1028728 - 1029600 + | CRISPR-associated Cas1 family protein Tneu_1141 1029591 - 1029863 + | CRISPR-associated Cas2 family protein Tneu_1142 1029847 - 1030419 + | CRISPR-associated Cas4 family protein TERM 641 1031190 - 1031219 + F 100 -18.5 -3.71265 | opp_overlap 1031186 1031184 CCCTACTAATAGCCG GGGCCCTGGCGGC ATCT GGCGCCGGGGCCC TTTCAATCCTCTCTT TERM 642 1032317 - 1032360 + F 88 -7.3 -5.05782 | gap 1, overlap 1032322 1032328 GTAGTTGAAAGCGTG TGGCTGG-AGGTCGGCGGCG CCGTC CGCCGTTGTTCTGCCCGCCG TTTTTTAAACTGGAT TERM 643 1032328 - 1032345 + F 75 -9.8 -3.78934 | overlap 1032322 1032317 CGTGTGGCTGGAGGT CGGCGG CGCCGT CCGCCG TTGTTCTGCCCGCCG Tneu_1143 1032527 - 1033516 + | hypothetical protein Tneu_1144 1033513 - 1034073 + | hypothetical protein Tneu_1145 1035640 - 1034039 - | AAA ATPase TERM 644 1035715 - 1035727 + r 74 -3.3 -4.96501 | opp_overlap 1035694 1035711 CGTTTATAAATCGTC GTGCA ACG TGCCC TTTCTTTTTGTAAAA TERM 645 1035841 - 1035798 - R 88 -7.3 -5.05782 | gap 1, overlap 1035813 1035814 ATCCAGTTTAAAAAA CGGCGGGCAGAACAACGGCG GACGG CGCCGCCGACCT-CCAGCCA CACGCTTTCAACTAC TERM 646 1035830 - 1035813 - R 75 -9.8 -3.78934 | overlap 1035798 1035814 CGGCGGGCAGAACAA CGGCGG ACGGCG CCGCCG ACCTCCAGCCACACG TERM 647 1038068 - 1038039 - R 77 -10 -3.96506 | overlap 1038034 1038041 GACGTTAAAATACAA TACATCGCCGCC TCTCAC GGCGACGATGAA TCTCAAGTTGAGGAT TERM 648 1038066 - 1038041 - R 81 -12.6 -3.56378 | overlap 1038039 1038034 CGTTAAAATACAATA CATCGCCGCC TCTCAC GGCGACGATG AATCTCAAGTTGAGG Tneu_1146 1039102 - 1038668 - | hypothetical protein Tneu_1147 1040113 - 1039106 - | hypothetical protein Tneu_1148 1040160 - 1040585 + | hypothetical protein Tneu_1149 1040582 - 1041505 + | CRISPR-associated RAMP Csm3 family protein Tneu_1150 1041493 - 1042320 + | hypothetical protein Tneu_1151 1042324 - 1043313 + | CRISPR-associated RAMP Csm5 family protein TERM 649 1043830 - 1043841 + G 70 -3.6 -4.63218 | GGTAAACGTGCTGAA GGCG ACGG CGTC TTTTGTTCCAGCGGC TERM 650 1043918 - 1043938 + G 72 -11.1 -3.39036 | CTCCTGGCCGCCGCC CTCGCCTCT ACG GGGGGCGAG TTCTACCTGGTGTCT TERM 651 1045221 - 1045206 - g 80 -3.2 -5.03715 | overlap 1045207 1045208 ATGACTTGGAAAAAA TCCCCA GATA CAGGGA GGACGAGGAGACACG Tneu_1152 1043300 - 1045567 + | CRISPR-associated Csm1 family protein Tneu_1153 1045564 - 1045944 + | hypothetical protein Tneu_1154 1047459 - 1046038 - | CRISPR-associated DxTHG family protein TERM 652 1046194 - 1046211 + g 74 -6.3 -4.57073 | GGCGAGGAAGTTGCG GACGTAG CGCT CTATGTC TTTTTCGAGGCGCTC TERM 653 1047671 - 1047652 - H 81 -10.6 -4.16943 | GCTTATATCTGAAAA CCTCGCCC TTTA GGGCGGGG ATGGCACTATGCGGC TERM 654 1049360 - 1049378 + G 72 -11.7 -3.29144 | GAGCCCGAGGCCCTT CCCGACG ACGTC CGTCGGG TTGTCGACCGCGTAG Tneu_1156 1049078 - 1049830 + | hypothetical protein TERM 655 1049941 - 1049952 + G 72 -2.2 -4.77165 | GTGATTGATAGATTG CTTC ATAC GAGG TTTTCTTCTGCCACA Tneu_1157 1049836 - 1050669 + | hypothetical protein Tneu_1158 1050717 - 1051001 + | hypothetical protein Tneu_1159 1051023 - 1052024 + | WD-40 repeat-containing protein TERM 656 1054128 - 1054171 + G 79 -13 -3.47573 | gap 1, overlap 1054127 CCACGCCTCTCTTAA GC-CGGCTGCCGCGGTGGTGG CCT TCTCCACAGCGGCGGCGGCGC TTCTGGTCTCCCTGG Tneu_1160 1052554 - 1054554 + | hypothetical protein TERM 657 1055131 - 1055145 + G 79 -9.2 -4.2679 | overlap 1055142 TTCCCAAGCTCGACC CGGCGG CCG CCGCTG TTTTGCTCAGCCTTC Tneu_1161 1054536 - 1055213 + | hypothetical protein Tneu_1163 1056400 - 1055591 - | radical SAM domain-containing protein Tneu_1162 1055459 - 1055647 + | paREP10 TERM 658 1055789 - 1055812 + gF 89 -12.4 -4.10657 | opp_overlap 1055788 TCTGTCGTATATGAG CTCGGCGCCT ATGG AGGCGGCGAG TTTTACAACCTCTGC TERM 659 1056749 - 1056761 + G 70 -10.5 -3.43203 | CAGAACTCTGTCTAG GCGGG CGG CCCGC TTCGTCTTCTGGTGG Tneu_1164 1056480 - 1056959 + | vitamin K epoxide reductase Tneu_1165 1057820 - 1056924 - | aldo/keto reductase Tneu_1166 1058531 - 1057839 - | metallophosphoesterase Tneu_1167 1059673 - 1058528 - | aminotransferase class-III Tneu_1168 1060011 - 1059700 - | FHA domain-containing protein TERM 660 1060252 - 1060273 + r 85 -12.9 -3.80625 | overlap 1060253 CCGCTATGACCTCCC TCCCCGCCC TAAG GGGCGGGGC TTTCGGTTGTAACAC TERM 661 1060253 - 1060272 + r 86 -16.4 -2.88054 | overlap 1060252 CGCTATGACCTCCCT CCCCGCCC TAAG GGGCGGGG CTTTCGGTTGTAACA Tneu_1169 1060957 - 1060337 - | uracil-DNA glycosylase superfamily protein TERM 662 1060535 - 1060559 + g 73 -10 -3.63627 | CCGCCAGGCCACTCT GCCCAGGG CCACCACCA CCCTGGGC TTTACGATCTCCACC Tneu_1170 1061093 - 1061761 + | hypothetical protein Tneu_1171 1061780 - 1062046 + | hypothetical protein Tneu_1172 1062665 - 1062006 - | phosphoribosylanthranilate isomerase TERM 663 1062981 - 1063021 + r 80 -11.7 -3.83026 | opp_overlap 1062982 1062984, overlap 1062982 GAGCCCTCTGTGAAG ACATGGGCAGTCCCTAGGC GTC GCCTAGGGACAGACCGCGA TTTACTCTACAAGGC TERM 664 1063020 - 1062982 - R 82 -15.2 -3.01791 | opp_overlap 1062982 1062981, overlap 1062984 AGCCCTCTGTGAAGA CATGGGCAGTCCCTAGGC GTC GCCTAGGGACAGACCGCG ATTTACTCTACAAGG TERM 665 1062982 - 1063020 + r 82 -15.2 -2.89602 | opp_overlap 1062982 1062984, overlap 1062981 AGCCCTCTGTGAAGA CATGGGCAGTCCCTAGGC GTC GCCTAGGGACAGACCGCG ATTTACTCTACAAGG TERM 666 1063018 - 1062984 - R 81 -14.2 -3.06696 | opp_overlap 1062982 1062981, overlap 1062982 CCCTCTGTGAAGACA TGGGCAGTCCCTAGGC GTC GCCTAGGGACAGACCG CGATTTACTCTACAA Tneu_1173 1063308 - 1063042 - | hypothetical protein TERM 667 1063292 - 1063320 + g 71 -7.3 -4.2109 | opp_overlap 1063291 1063293, overlap 1063293 ATTGCTCTTATGAAT AGGCTCGGCCTCA TCA TGAGCCCCAGCCC TTTCTCTGTCTCTTA Tneu_1174 1063526 - 1063305 - | hypothetical protein Tneu_1175 1066147 - 1063694 - | plasma-membrane proton-efflux P-type ATPase Tneu_1176 1066202 - 1067458 + | pyridoxal-phosphate dependent TrpB-like enzyme TERM 668 1067788 - 1067743 - g 73 -8.9 -3.96148 | opp_overlap 1067718 1067742 GGCTGGTACTATAAA CCT-GTCCACGCTCGCCGCTG TGGTCG CCGCGGCG-GCGGGGGCCAGG GTGTTGAAGCACGGG Tneu_1177 1067459 - 1068469 + | anthranilate phosphoribosyltransferase Tneu_1178 1068466 - 1069734 + | anthranilate synthase TERM 669 1070066 - 1070100 + G 71 -8.5 -4.07568 | gap 1, opp_overlap 1070050 1070042 CAGCCAGGTGCGCCA CCTC-GGCGGGCCGCT GTAC AGGGGCGTGCCAGAGG TTTTCCAAGCCGCCC Tneu_1179 1069725 - 1070306 + | glutamine amidotransferase of anthranilate synthase Tneu_1180 1070303 - 1071010 + | tryptophan synthase, alpha subunit Tneu_1181 1072261 - 1070999 - | citrate transporter Tneu_1182 1072303 - 1073154 + | hypothetical protein Tneu_1183 1073145 - 1073504 + | hypothetical protein Tneu_1184 1073497 - 1073916 + | hypothetical protein Tneu_1185 1073948 - 1074115 + | 30S ribosomal protein S30e TERM 670 1074373 - 1074395 + G 73 -4.6 -4.72272 | overlap 1074374 CCAGTGGGCTAAGCG CGCTGGGGCC GAG GGCCGCCGCC TTTTTGATCCCGGCG TERM 671 1075219 - 1075200 - g 70 -10.6 -3.53091 | opp_overlap 1075200 1075194 AGGCTTTTGGCCAAA GCCGCCGC GGTT GTGGCGGC TCTCTCGGCTCTATA TERM 672 1075200 - 1075219 + G 70 -12.8 -2.91239 | opp_overlap 1075200, overlap 1075194 AGGCTTTTGGCCAAA GCCGCCGC GGTT GTGGCGGC TCTCTCGGCTCTATA Tneu_1186 1074120 - 1075256 + | hypothetical protein Tneu_1187 1075273 - 1075827 + | thymidine kinase Tneu_1188 1075879 - 1076205 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein TERM 673 1076301 - 1076272 - T 79 -7.7 -4.57837 | ATATGCGCCTAAAAA CGGCGGTATACGC GGTT GCGGATCTCGCCG ACGCGGCGACCACGG Tneu_1190 1078347 - 1077214 - | hypothetical protein Tneu_1191 1079699 - 1078344 - | type III restriction protein res subunit Tneu_1192 1080559 - 1079690 - | ornithine cyclodeaminase/mu-crystallin Tneu_1193 1081224 - 1080583 - | hypothetical protein Tneu_1194 1081240 - 1081743 + | abortive infection protein Tneu_1195 1083159 - 1081723 - | radical SAM domain-containing protein TERM 674 1081883 - 1081905 + g 70 -12.7 -2.87132 | overlap 1081873 1081885 AGGTAGCCCACGGGG GAGGGGGCC CCCGC GGCCTCCTC TATATGCCCAGCGAC TERM 675 1081997 - 1082013 + g 78 -13.7 -3.18945 | overlap 1081993 AACTCGTCGTGGGGG GCCCTCC TGA GGAGGGC TATCTTCTCCCTGAG TERM 676 1082810 - 1082863 + g 89 -11.6 -4.18018 | gap 2 GCGTCGGCGAATTCG GCCAGCGGCTCCGGGTTGGCGGAGAC GGGG GGC-CCGCCGACCACCAGCCGC-GGC TTTTCCCTCCCGGCC Tneu_1196 1083190 - 1083609 + | hypothetical protein Tneu_1197 1083653 - 1084060 + | ribosomal protein S24e Tneu_1198 1084063 - 1084254 + | ribosomal protein S27a TERM 677 1084609 - 1084635 + G 90 -14.4 -3.46602 | AGGTGGCCCGCTACG CCACCGGCGCGT GCG ACCCGCTGGTGG TTCTGATCTCCGGCG Tneu_1199 1084254 - 1085264 + | glycoprotease family metalloendopeptidase TERM 678 1085434 - 1085461 + GF 80 -14.2 -3.02144 | gap 1 AAGATCTCGGGGGTG C-CCGACCCCTAC CAC GTGGGGGTCGGCG TGTTGAGGGGGGTCC Tneu_1200 1085284 - 1085607 + | hypothetical protein Tneu_1201 1085582 - 1085902 + | hypothetical protein Tneu_1202 1087098 - 1085860 - | radical SAM domain-containing protein Tneu_1203 1087130 - 1087822 + | hypothetical protein Tneu_1204 1087943 - 1090375 + | phosphoenolpyruvate synthase Tneu_1206 1091265 - 1091873 + | ribosomal protein S5 Tneu_1207 1091870 - 1092397 + | ribosomal protein L30 TERM 679 1092442 - 1092458 + F 86 -5.7 -5.05782 | CGGCACCTGCCCATC CTCGCCG CTA CGGAGGG TTTTTTAAAGTGGAT Tneu_1208 1092472 - 1092645 + | paREP10 TERM 680 1093774 - 1093750 - g 79 -15 -2.88427 | overlap 1093739 AAGAGTTGGGAGAGA CCCCCTCGAC CTTTT GCCGAGGGGG AGAGCCCTAACCGAC Tneu_1209 1092665 - 1093801 + | hypothetical protein Tneu_1210 1094097 - 1093798 - | hypothetical protein Tneu_1211 1094360 - 1094091 - | hypothetical protein Tneu_1212 1094891 - 1094391 - | hypothetical protein Tneu_1213 1097860 - 1094885 - | hypothetical protein TERM 681 1095298 - 1095276 - G 91 -13.4 -3.85817 | opp_overlap 1095274 1095290 ACTTCGCCCCAGAAA TCCCCGCTGG CGG CCAGCTGGGA GCTGTATTCAACCCC TERM 682 1096490 - 1096506 + g 77 -3.5 -4.99035 | TCGACAGGGATTGGG CGGCGAG AAC CAAGCCG TTTTTATCTCCCTCA Tneu_1214 1098541 - 1097891 - | hypothetical protein Tneu_1215 1098887 - 1098543 - | hypothetical protein Tneu_1216 1099326 - 1098889 - | hypothetical protein TERM 683 1099207 - 1099193 - G 72 -12.8 -3.02829 | overlap 1099182 TATATGTGCCTAACA GGCGCG TCG CGCGCC GGCGCGATAGGCGCT TERM 684 1099312 - 1099300 - G 80 -10.5 -4.0616 | GAGCGCAACTATAAA CGCCG AGG CGGCG ACGAGGTCCTCCATG Tneu_1217 1100242 - 1099328 - | hypothetical protein Tneu_1218 1100731 - 1100273 - | hypothetical protein Tneu_1219 1101959 - 1100763 - | hypothetical protein TERM 685 1101420 - 1101405 - G 82 -11.8 -3.85698 | GGGCGGGCTTATAAA CGCCGC TAGC GCGGCG GCGCCGGCGCCCAGG TERM 686 1101802 - 1101789 - G 73 -9.5 -3.85698 | CTTCTCCTCTAGAAA CGCCG CCGA CGGCG AAGGCATTAGGGATG Tneu_1220 1102327 - 1101989 - | hypothetical protein Tneu_1221 1102560 - 1102324 - | hypothetical protein Tneu_1222 1104121 - 1102592 - | type II secretion system protein, conjectural TERM 687 1103338 - 1103308 - G 81 -14 -3.4072 | overlap 1103310 1103312 TAGTCTCCAGGACAA GAGAGGCCAGAGCC AAC AGCTCCAGCCCCTC TGGGCTGTAGGCGCT TERM 688 1103359 - 1103310 - G 76 -12.8 -3.27475 | gap 1, overlap 1103308 1103312 GTCTCCAGGACAAGA GAGGCCAGAGCCAACAGCTCCAG CCCCT CTGG-GCTGTAGGCGCTGGACAC CCGCTCCGTCTCGAG TERM 689 1103357 - 1103312 - G 78 -14 -3.20322 | gap 1, overlap 1103308 1103310 CTCCAGGACAAGAGA GGCCAGAGCCAACAGCTCCAG CCCCT CTGG-GCTGTAGGCGCTGGAC ACCCGCTCCGTCTCG Tneu_1223 1104822 - 1104118 - | hypothetical protein TERM 690 1104625 - 1104637 + g 70 -10.5 -3.53012 | TATCCTGTGGACGTA GGGCG CGC CGCCC TTTAAGAAGGGCGCC Tneu_1224 1105118 - 1104819 - | hypothetical protein Tneu_1225 1105704 - 1105111 - | hypothetical protein Tneu_1226 1106366 - 1105701 - | hypothetical protein Tneu_1227 1107221 - 1106619 - | hypothetical protein Tneu_1228 1107455 - 1107237 - | hypothetical protein Tneu_1229 1107753 - 1108163 + | signal-transduction protein Tneu_1230 1108184 - 1108597 + | UspA domain-containing protein Tneu_1231 1109780 - 1108587 - | major facilitator transporter Tneu_1232 1109839 - 1110498 + | hypothetical protein Tneu_1233 1111194 - 1110466 - | hypothetical protein TERM 691 1110958 - 1110943 - G 76 -6.8 -4.54449 | overlap 1110944 ATATTTGACAGAAAA TGCGGC GCTT ACCGCA GCAGCCGCGAGGGAC Tneu_1234 1111508 - 1111681 + | preprotein translocase subunit SecG TERM 692 1112165 - 1112155 - g 71 -8.2 -4.01888 | overlap 1112156 AGTCGATAGGATAAA CGCC GGA GGCG GCATAAACGGGGTCC Tneu_1235 1111886 - 1113223 + | extracellular ligand-binding receptor TERM 693 1113425 - 1113444 + G 73 -9.2 -3.92075 | GCGGCCGTTGGGGTT GCGGCGTT GGCG GGCGCCGC TTTCTACATAGGCGT Tneu_1236 1113224 - 1114066 + | inner-membrane translocator Tneu_1237 1114050 - 1114955 + | inner-membrane translocator Tneu_1238 1114933 - 1115625 + | ABC transporter related Tneu_1239 1115618 - 1116259 + | ABC transporter related Tneu_1240 1116435 - 1116719 + | thiamineS protein TERM 694 1116962 - 1116981 + G 70 -10 -3.53733 | opp_overlap 1116950, overlap 1116965 CTACTTGACGGCCGT CGAGCTCG CCGA CGAGCTTG TGTTTGTGGACTCCG Tneu_1241 1116747 - 1117448 + | sugar fermentation stimulation protein Tneu_1242 1117575 - 1118375 + | beta-lactamase domain-containing protein Tneu_1243 1118439 - 1118582 + | hypothetical protein TERM 695 1118864 - 1118837 - g 73 -4.6 -4.62336 | overlap 1118839 AGTTGAGGCGAAAAA CGCCGCAGAGGC CATC GCCCAAGCGGAG CGCCTAATCAGGAGG Tneu_1244 1118619 - 1118888 + | hypothetical protein Tneu_1245 1118885 - 1119592 + | ATP binding protein Tneu_1246 1120032 - 1119694 - | hypothetical protein Tneu_1247 1120742 - 1120074 - | hypothetical protein TERM 696 1120440 - 1120458 + g 73 -8.8 -3.96531 | TTTCACTACGTTCCG CCTCACGG CCT CCGTCAGG TTTCTAAATATCTCC Tneu_1248 1121192 - 1120746 - | hypothetical protein TERM 697 1121075 - 1121108 + g 76 -10.1 -3.71517 | CAGGCGGCGGGGGAG GCGGAGGAGGTGGCG GCGG CGCCGGCTCCACGGC TTGTCTTACCTCTTG Tneu_1249 1121691 - 1121230 - | hypothetical protein Tneu_1250 1123478 - 1121712 - | hypothetical protein TERM 698 1121815 - 1121832 + g 70 -9.8 -3.53012 | CTAAGGGCTTGGCAC GGCCGC GCCGCG GCGGCC TTTGCAGCCGAGGCC Tneu_1251 1123552 - 1124331 + | hypothetical protein Tneu_1252 1124321 - 1124818 + | hypothetical protein Tneu_1253 1125797 - 1124793 - | thioesterase superfamily protein TERM 699 1126002 - 1125957 - R 75 -11.7 -3.38281 | opp_overlap 1125957, overlap 1125989 1125990 CTATTTAAAATTTAA GCCGGGGGGCCGACTTTCACG GGGC CGCCAAAGGCGGCGCTCCAGC GGCACTCAGACAGGA Tneu_1254 1126654 - 1126037 - | ribosomal protein L18P/L5E Tneu_1255 1127099 - 1126656 - | ribosomal protein L19e Tneu_1256 1127563 - 1127102 - | ribosomal protein L32e Tneu_1257 1127987 - 1127595 - | ribosomal protein S8 TERM 700 1128077 - 1128055 - R 76 -5.5 -4.84017 | gap 1, overlap 1128057 AACGCCTCAGAAAAA TGCGCC-CCG AAGC CGGCGGCGGA CCACGCGCCCTCGCA Tneu_1258 1128390 - 1128226 - | ribosomal protein S14 TERM 701 1128361 - 1128375 + g 71 -5.6 -4.36914 | GCTTTTGCCGTAGGG CCTCTC CTT GGGGGG TTTTGTAGAGGGCAC Tneu_1259 1129308 - 1128421 - | extracellular solute-binding protein TERM 702 1129368 - 1129380 + G 70 -3.3 -4.58395 | opp_overlap 1129350 GCCGTCGTTGGAGGC GGCAT CAT AGGCC TTTTTACGGCATACC Tneu_1260 1129344 - 1130435 + | FAD dependent oxidoreductase Tneu_1261 1130932 - 1130432 - | hypothetical protein Tneu_1262 1131595 - 1130957 - | peroxiredoxin TERM 703 1131471 - 1131454 - G 78 -9.8 -3.85817 | ACTCCGTCGTACAAA CCGGCG TGAAGT CGCCGG GGTGGCTAAACAGCA Tneu_1263 1131927 - 1132622 + | hypothetical protein Tneu_1264 1133216 - 1132602 - | lysine exporter protein LysE/YggA TERM 704 1133429 - 1133468 + G 74 -12.8 -3.14132 | gap 1 CGTCGGCTTGATTGG GCGGCTGGCCGCG-GAGCT GGG GGCTTACGTGGCCGGCGGC TTCCTGGAGCGCGGA TERM 705 1133976 - 1133965 - g 75 -2.2 -4.87273 | AAGAGGCCAGAAAAA CCGT GCCG ACGA TATACCTCAGGAGAC Tneu_1265 1133244 - 1134044 + | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase Tneu_1266 1134885 - 1134058 - | ExsB family protein Tneu_1267 1135603 - 1134911 - | phosphoribosyltransferase TERM 706 1135020 - 1135038 + g 76 -8.8 -4.11216 | GCCTTGTCGCACAGG CCCGCAAG CGC CTTGAGGG TTTTCCCCGTCCGGG Tneu_1268 1136841 - 1135624 - | acyl-CoA dehydrogenase domain-containing protein Tneu_1269 1136866 - 1137447 + | hypothetical protein Tneu_1270 1138317 - 1137772 - | flavin reductase domain-containing protein Tneu_1271 1138554 - 1138339 - | hypothetical protein Tneu_1272 1138611 - 1139009 + | hypothetical protein Tneu_1273 1139432 - 1138998 - | hypothetical protein TERM 707 1140134 - 1140082 - g 77 -11.1 -3.61404 | gap 1, overlap 1140083 CCACGAAGCACATAA CCTC-CGGCGAGGGAGGCGCCGTC GCCACA GACGTCGCCGCCTACGCGGAGAGG GCAAGGCTAATTAGG TERM 708 1140435 - 1140410 - g 84 -3.1 -5.1925 | GGAGAAGCTAAAAAA GCCCCGCGACT ACGT AGTAGAGGCGC TGAGGGCAGAAGGCG Tneu_1274 1139490 - 1140704 + | glutamine--scyllo-inositol transaminase Tneu_1275 1140861 - 1140694 - | paREP10 TERM 709 1140908 - 1140875 - R 86 -5.9 -5.05782 | gap 1, opp_overlap 1140877 1140899 1140902, overlap 1140876 ATCCACTTTAAAAAA CCCTCCGTAGCGGC GTTTAGG GCCGCG-CGGAGGC GCTATATATTCAGCC Tneu_1276 1141770 - 1140910 - | TatD-related deoxyribonuclease Tneu_1277 1142984 - 1142004 - | AAA ATPase Tneu_1278 1143205 - 1143498 + | hypothetical protein TERM 710 1144070 - 1144097 + G 81 -13.4 -3.28924 | gap 1, overlap 1144075 GAGGCCGGAGCCGGC GGCCTCCC-CCTC TGG GAGGAGGGTGGCC TTCTCGGAGGAGGTG Tneu_1279 1143495 - 1144673 + | hypothetical protein Tneu_1280 1144701 - 1145063 + | putative transcriptional regulator Tneu_1281 1146394 - 1145060 - | FAD linked oxidase domain-containing protein TERM 711 1145560 - 1145609 + g 84 -5.5 -4.91109 | overlap 1145561 CCCTCAGCTTGTTGA TGACCTTTTCCTCGGCGCCGGCG TTTA CGTCTACGCCTATGAAGAGGGCG TTTTTCTCCTCCAGC TERM 712 1146391 - 1146421 + g 76 -5.5 -4.72272 | gap 1, opp_overlap 1146397 1146398, overlap 1146394 1146398 TAAGCCAGCCCAGAT C-CATAAGGGGGGT GGGG ACCCCCTTTATCTG TTTTTAGTGGAAAAA TERM 713 1146394 - 1146417 + g 77 -11.8 -3.57901 | opp_overlap 1146397 1146398, overlap 1146391 1146398 GCCAGCCCAGATCCA TAAGGGGGGT GGGG ACCCCCTTTA TCTGTTTTTAGTGGA TERM 714 1146398 - 1146413 + r 88 -10.4 -4.38876 | opp_overlap 1146398 1146397, overlap 1146394 1146391 GCCCAGATCCATAAG GGGGGT GGGG ACCCCC TTTATCTGTTTTTAG Tneu_1282 1147897 - 1146887 - | peptidase M24 TERM 715 1147357 - 1147407 + g 83 -15.5 -3.02471 | GGGCGGTGTTGGGGC CG-AACTGTACGAGGATGGGGCCGG GGT CCAGCCCC-TCCTCGTACAGAGACG TGTATATCCTGGCGG Tneu_1283 1148259 - 1147894 - | hypothetical protein TERM 716 1148223 - 1148250 + g 72 -12.8 -3.06696 | gap 1 CGGGCCTGCAACGCT CCGCCGCCTCTTT GAA GAAGAGG-GGCGG TATCTTCACAGCAGG Tneu_1284 1148624 - 1148256 - | CopG family transcriptional regulator Tneu_1285 1148669 - 1149127 + | riboflavin synthase Tneu_1286 1150050 - 1149358 - | hypothetical protein Tneu_1287 1150940 - 1150047 - | phosphate uptake regulator, PhoU Tneu_1288 1151640 - 1151014 - | hydrolase TERM 717 1151585 - 1151562 - G 95 -13.2 -4.07568 | gap 1 CCTCTGTCCCCAAAA CCGCGTGG-AG CCT CTGCCACGCGG AGAGAAACGGCGTAA TERM 718 1151608 - 1151593 - G 80 -10.4 -4.04206 | overlap 1151604 CCACGCGGAGAGAAA CGGCGT AATT ACGCCG TCTACGTCGAGGATA Tneu_1289 1151864 - 1151637 - | ferredoxin Tneu_1290 1152548 - 1152096 - | methylated-DNA--protein-cysteine methyltransferase Tneu_1291 1152588 - 1152860 + | thiamineS protein Tneu_1292 1153339 - 1152857 - | hypothetical protein Tneu_1293 1153420 - 1153950 + | deoxycytidine triphosphate deaminase Tneu_1294 1154786 - 1153947 - | bis(5'nucleosyl)-tetraphosphatase, ApaH TERM 719 1154202 - 1154229 + g 76 -13.4 -2.98823 | gap 1, opp_overlap 1154198 TCTGCCGAAGAGCCA CGCGCCTGGGCCC CGG GGGCTT-GGCGCG TATGTGTCGCACGGG Tneu_1295 1155478 - 1154774 - | TatD-related deoxyribonuclease Tneu_1296 1155607 - 1156392 + | ATPase involved in chromosome partitioning-like protein TERM 720 1156476 - 1156498 + T 77 -11.3 -3.54721 | gap 1, overlap 1156465 TCGTAGCAGTCGCGG GCGCA-GGCG ATCA CGCCATGCGC TTGTGTAGCCTTTTG Tneu_1297 1157235 - 1156486 - | ABC transporter related TERM 721 1157257 - 1157246 - R 75 -5.8 -4.65168 | opp_overlap 1157235 ACCACACGTTAAAAA GGTG TTTA CACC CACATCGCCCCCGCC TERM 722 1157335 - 1157356 + r 74 -12.9 -2.74701 | overlap 1157335 GTCCTGCCGCTACCC CGGCGGCCC CGTC GGGCGGCCG TCATATTACGCCTCT Tneu_1298 1158046 - 1157357 - | polar amino acid ABC transporter, inner membrane subunit Tneu_1299 1158109 - 1158489 + | hypothetical protein Tneu_1300 1158520 - 1158726 + | hypothetical protein Tneu_1301 1160006 - 1158723 - | Glu/Leu/Phe/Val dehydrogenase TERM 723 1159694 - 1159704 + g 73 -4.6 -4.60487 | CGCCGTAGGGGAGGC CGGC GAG GCTG TTTTTCAGAGTCATG TERM 724 1159997 - 1160007 + g 70 -3.2 -4.64157 | overlap 1159994 TGTAGGCCCAACTGG CGTG AGC CATG TTTTCTCCTTCTTTC TERM 725 1160591 - 1160622 + G 70 -12.4 -2.87211 | gap 1, overlap 1160594 GGGCGTGGACACTTC GAGGCGTATGTAGGC GGC GCCCACATAC-CCTC TCTCTACCGCGAGCT Tneu_1302 1160090 - 1160983 + | ROK family protein TERM 726 1161017 - 1161007 - f 86 -6.8 -5.15117 | GAAAAGTTTAAAAAA CGTC ATA GACG GGGCTTTGTATGGTT TERM 727 1161488 - 1161456 - g 78 -2.5 -5.12474 | opp_overlap 1161487, overlap 1161458 GAGAAGATAGAAAAA GCCGGAGGAGAGG TCAGGAT CGTCCCCGCCGTC CATAGGTGATGGATT Tneu_1303 1161027 - 1161497 + | ribosomal protein L15 Tneu_1304 1161497 - 1162876 + | SecY protein Tneu_1305 1162900 - 1163031 + | hypothetical protein Tneu_1306 1163031 - 1163822 + | hypothetical protein Tneu_1307 1165060 - 1163819 - | nucleotidyl transferase Tneu_1308 1166529 - 1165081 - | starch synthase TERM 728 1166140 - 1166128 - G 70 -10.5 -3.53761 | opp_overlap 1166134 1166135 GAAGCGCTCCGCAAA GGCGG CCG CCGCC CTCGCCAGGAGGGAG Tneu_1309 1167904 - 1166531 - | Alpha-amylase TERM 729 1167902 - 1167892 - G 85 -6.8 -4.84359 | GCACCTCTAGAAAAA GCAC AAC GTGC ATAGGGCTTAGCACA Tneu_1310 1167938 - 1169776 + | aldehyde ferredoxin oxidoreductase Tneu_1311 1170137 - 1171588 + | glycosyl transferase group 1 Tneu_1312 1171616 - 1173043 + | thiamine biosynthesis/tRNA modification protein ThiI TERM 730 1173298 - 1173318 + F 82 -8.1 -4.56597 | opp_overlap 1173291 1173312 1173313, overlap 1173299 GCATTTAAGCCTTCC GCCCGCGCC AAA GACGCGGGA TTTTTCGGCGACGGA TERM 731 1173299 - 1173317 + F 74 -11.6 -3.33744 | opp_overlap 1173291 1173312 1173313, overlap 1173298 CATTTAAGCCTTCCG CCCGCGCC AAA GACGCGGG ATTTTTCGGCGACGG Tneu_1313 1173373 - 1174320 + | beta-lactamase domain-containing protein TERM 732 1174600 - 1174584 - g 71 -5.7 -4.36914 | overlap 1174570 1174569 1174585 CCGCCGTGGAGAAAA CGGCCAC GAC GCGGCCC GCTGAGGCAACAACG Tneu_1314 1174466 - 1175761 + | basic membrane lipoprotein Tneu_1315 1175766 - 1177157 + | ABC transporter related TERM 733 1177493 - 1177435 - g 74 -6.3 -4.56597 | gap 1, opp_overlap 1177404 1177452 1177455 CGTTTCCGCGAAAAA CGCGG-CGGAGGGCCTATTGCTGGCGGC GGCG GCCGCCGGGGCTTGGACCGCCGTCCCCG CCCTCCTTAGATCTT Tneu_1316 1177154 - 1178119 + | inner-membrane translocator TERM 734 1178249 - 1178266 + G 73 -14.1 -2.72463 | overlap 1178255 GGGTGGTCTATCTGT CGGCCGC GGTG GCGGCCG TGGTTGGCCCTCCCT TERM 735 1178255 - 1178302 + G 81 -13.3 -3.30338 | gap 1, overlap 1178249 1178286 TCTATCTGTCGGCCG CGGTGGCGGCCGTGGTTGGCCC TCCCT GGGGCATCCCC-GCCGCCGTCG TTGTGGGGACGTTGT TERM 736 1178762 - 1178788 + G 78 -2.8 -5.01546 | overlap 1178766 GGTCGCCTCTGATCG CGGTGGGGGC CTCCATC GTGCCCTCCG TTTTTATGTCGCTTT Tneu_1317 1178110 - 1178976 + | inner-membrane translocator Tneu_1318 1179480 - 1179130 - | hypothetical protein Tneu_1319 1179578 - 1179477 - | hypothetical protein Tneu_1320 1179620 - 1181974 + | DNA polymerase Pol2 Tneu_1321 1183182 - 1181971 - | TOPRIM domain-containing protein Tneu_1322 1183322 - 1184197 + | methionine aminopeptidase, type II Tneu_1323 1184263 - 1185909 + | thermosome Tneu_1325 1187704 - 1186139 - | ABC transporter related Tneu_1326 1189154 - 1188414 - | hypothetical protein Tneu_1327 1189461 - 1189138 - | hypothetical protein Tneu_1328 1190147 - 1189608 - | hypothetical protein TERM 737 1189770 - 1189785 + g 78 -7.5 -4.72277 | overlap 1189756 ACTGTAGAGGGGGGC GGCCG CGTCTA CGGCC TTTCTTTCTCTTCTT TERM 738 1189918 - 1189934 + g 78 -2.9 -5.02476 | TCTTTCTCCGGCGCC GCAAGGA GTT TTCTAGC TTTTTTAGCGCCTCT Tneu_1329 1191165 - 1190137 - | type II secretion system protein E TERM 739 1190825 - 1190842 + g 80 -3.3 -5.10163 | overlap 1190827 TTCACGAGGCGCAAC GTGGCGA CTTC TTGCCCC TTTTCTTTTCCGCTT Tneu_1330 1191613 - 1191146 - | transcription factor TFIIB cyclin-related TERM 740 1191806 - 1191795 - g 78 -4.4 -4.75309 | CCAAACGTAATAAAA CTCA GCGG TGAG GTAAATGCGACGATA Tneu_1331 1191738 - 1192052 + | hypothetical protein Tneu_1332 1192247 - 1192678 + | like-Sm ribonucleoprotein core Tneu_1333 1195421 - 1192683 - | DEAD/DEAH box helicase domain-containing protein Tneu_1334 1196055 - 1195450 - | tartrate/fumarate subfamily Fe-S type hydro-lyase beta subunit Tneu_1335 1196129 - 1196995 + | tartrate/fumarate subfamily Fe-S type hydro-lyase alpha subunit Tneu_1336 1197229 - 1197077 - | CopG/Arc/MetJ family transcriptional regulator Tneu_1337 1197246 - 1197686 + | flavin reductase domain-containing protein Tneu_1338 1198003 - 1197701 - | MoaD family protein Tneu_1339 1198399 - 1198019 - | hypothetical protein TERM 741 1198745 - 1198720 - g 86 -14.7 -3.33261 | opp_overlap 1198727, overlap 1198698 1198744 CTTCAAGGCGGAGAA CCTCGCCGGGC TTAC GCCCGACAAGG CCGAAGCCCTGCTCT TERM 742 1198841 - 1198816 - g 75 -13.2 -2.94099 | GCTTCTGATGAGAGA CGTGGGCCGC AAGGCG GCGGCCCGCG GAGGCTTTGAGAAGA Tneu_1340 1198430 - 1199332 + | iron-sulfur cluster loop TERM 743 1199376 - 1199394 + G 89 -10.3 -4.56597 | CGGGTGGAGCGACGA CCTCTCC ATCGC GGAGAGG TTTTTAGACGCCGCC TERM 744 1200012 - 1200001 - g 78 -2.2 -5.03314 | GCTAGCGTGAAAAAA GTCG GTTT CAAC GAGGTGATGCTCCCG Tneu_1341 1199332 - 1200297 + | hypothetical protein TERM 745 1200811 - 1200835 + G 71 -8.5 -4.08216 | opp_overlap 1200803 GGCATAATCAGGAGG GTCTTGAGGAG GGC CGCCTCGAGGC TTTTCGAGGAGCTAG Tneu_1342 1200313 - 1200882 + | hypothetical protein Tneu_1343 1202060 - 1200879 - | hypothetical protein Tneu_1344 1203419 - 1202064 - | hypothetical protein TERM 746 1202622 - 1202589 - G 74 -5.9 -4.57073 | gap 1 GAGCTCTTCGAAAAA GGCGCTGT-CCACGAG GTG CTTGAGGTACAGCTCC ACCTTCTCAATCGTC Tneu_1345 1204066 - 1203431 - | hypothetical protein Tneu_1346 1204623 - 1204054 - | class II aldolase/adducin family protein Tneu_1347 1205986 - 1204625 - | geranylgeranyl reductase Tneu_1348 1206694 - 1206017 - | beta-lactamase domain-containing protein Tneu_1349 1206954 - 1206715 - | hypothetical protein Tneu_1350 1207388 - 1206984 - | resolvase, Holliday junction-type Tneu_1351 1207870 - 1207385 - | hypothetical protein Tneu_1352 1208460 - 1207867 - | 2-alkenal reductase Tneu_1353 1208556 - 1208897 + | 30S ribosomal protein S25e Tneu_1354 1209489 - 1208887 - | hypothetical protein Tneu_1355 1209741 - 1209517 - | FaeA family protein TERM 747 1209750 - 1209761 + r 75 -2.2 -5.09225 | gap 1 TCGGCATGTAGGATG GCGCC TCT GG-GC TTTTTTCACTGCCGT Tneu_1356 1210873 - 1209818 - | hydroxymethylglutaryl-CoA synthase Tneu_1357 1211274 - 1210876 - | hypothetical protein Tneu_1358 1212415 - 1211309 - | acetyl-CoA C-acyltransferase TERM 748 1211667 - 1211643 - G 71 -7.8 -4.07568 | gap 1, opp_overlap 1211643 TTTGCCTTTTTAAAA GCCAGCTGCGA TGCA TCGC-GCAGGC TGTATAAAACGTCGT TERM 749 1211720 - 1211749 + g 71 -7.7 -4.01135 | opp_overlap 1211735 1211737, overlap 1211715 CGTAGAGTTTGTGGA GGCGGATACCGAC AAGA GGCGGGGTCCGTC TTTCCTGTTGTTACA TERM 750 1212151 - 1212176 + g 76 -8.9 -4.09685 | opp_overlap 1212140 1212151 1212152, overlap 1212152 CATAGGCCATGGAAA TGGCGGCGCCT CCGG AGCCGTCGCCG TTTTCGACCCTAAAC Tneu_1359 1212452 - 1213639 + | 3-hydroxy-3-methylglutaryl coenzyme A reductase Tneu_1360 1214048 - 1213629 - | hypothetical protein TERM 751 1214818 - 1214794 - g 70 -4.2 -4.56597 | TGGCGGGGGGAAAAA CTCGCTTAGG GATAT CATAGGCGAG ACTTGGGAGTCGAGG TERM 752 1215863 - 1215877 + G 70 -3.5 -4.61231 | gap 1, overlap 1215864 GCCGTTGTGTTGGAT C-CGCC GCTC GGCGTG TTTTTCAACGTCTAC Tneu_1361 1214390 - 1216954 + | DNA polymerase B region Tneu_1362 1217353 - 1216946 - | hypothetical protein Tneu_1363 1217944 - 1217384 - | CDP-alcohol phosphatidyltransferase TERM 753 1217838 - 1217824 - G 71 -9.2 -3.80746 | overlap 1217822 GGCCGAAAAACAACA CCAGCG GTA CGCCGG CCCAGGCAACCAGGG Tneu_1364 1218454 - 1217963 - | hypothetical protein TERM 754 1218270 - 1218244 - G 74 -11.6 -3.53091 | opp_overlap 1218235 1218257 1218261 1218264 AGGCCTGCGTCGAAA GGAGCCACGA CGCTATC TCGCGGCTCC GCCCTTTGTGGGGGG Tneu_1365 1218747 - 1218451 - | ribosomal protein S26 Tneu_1366 1220253 - 1218790 - | prolyl-tRNA synthetase Tneu_1367 1221068 - 1220304 - | tRNA methyltransferase complex GCD14 subunit TERM 755 1220771 - 1220748 - G 76 -7.4 -4.57341 | gap 1 AACGGCGGTTAAAAA GCCAGAGCCTG TGC CAGCCTC-GGC GACTACCGAACCAGG Tneu_1368 1221574 - 1221086 - | hypothetical protein Tneu_1369 1222444 - 1221815 - | Mn2+-dependent serine/threonine protein kinase TERM 756 1223120 - 1223096 - g 71 -5.6 -4.40003 | overlap 1223097 1223098 CGCTAGAAACATAAA CTGGGTAGGC GGCGA GCCTACCCCC AATATTCCGTACATC Tneu_1370 1222491 - 1223612 + | radical SAM domain-containing protein Tneu_1371 1224506 - 1223580 - | hypothetical protein Tneu_1372 1224716 - 1224552 - | hypothetical protein Tneu_1373 1224758 - 1225300 + | hypothetical protein Tneu_1374 1226184 - 1225297 - | phosphoesterase domain-containing protein TERM 757 1225686 - 1225700 + g 71 -5.6 -4.36914 | overlap 1225678 CGCCTACGGCGTCTC CAAGCG TGC CGCCTG TTTTCTCAAGGAGGG Tneu_1375 1226441 - 1226169 - | hypothetical protein Tneu_1376 1226826 - 1226446 - | prefoldin, beta subunit Tneu_1377 1227069 - 1226857 - | hypothetical protein TERM 758 1226950 - 1226925 - G 72 -12.6 -3.10905 | gap 1, opp_overlap 1226924 1226923 1226922, overlap 1226916 GTAGAAGCGACCTAA GGCTGGAGGCG TCGGC CGCCTCC-GCC ACTATTTTACCCCCG Tneu_1378 1227601 - 1227062 - | Brix domain-containing protein TERM 759 1227500 - 1227524 + g 73 -9.9 -3.56568 | opp_overlap 1227502 CTTCTTACCTCTAAC CACCTTGTCGG TCC CCGGCAGGGAG TTTACAAGGTCGTTA Tneu_1379 1227931 - 1227626 - | ribosomal L37ae protein Tneu_1380 1228816 - 1227995 - | 3' exoribonuclease Tneu_1381 1229558 - 1228818 - | exosome complex exonuclease 1 Tneu_1382 1230294 - 1229578 - | RNA-binding S1 domain-containing protein Tneu_1383 1230992 - 1230294 - | Shwachman-Bodian-Diamond syndrome protein Tneu_1384 1231924 - 1231055 - | hypothetical protein TERM 760 1232749 - 1232771 + G 76 -9 -4.01902 | CAACTTCGACTACTG CCTCACCCGC AAG GCGGCCGAGG TTCTTTCATCGCTGT Tneu_1385 1231964 - 1232887 + | hypothetical protein Tneu_1386 1233127 - 1232903 - | hypothetical protein Tneu_1387 1233582 - 1233142 - | hypothetical protein Tneu_1388 1233770 - 1234027 + | hypothetical protein Tneu_1390 1235162 - 1234437 - | proteasome endopeptidase complex TERM 761 1236394 - 1236367 - g 74 -11.2 -3.53811 | opp_overlap 1236389, overlap 1236369 CTGAGCTCTTGGAAA TAGGCGCCAAGG CCAT CCTAGGCGCCGA GGCCGTATTCGCTGT TERM 762 1236392 - 1236369 - g 81 -13.8 -3.34715 | opp_overlap 1236389, overlap 1236367 GAGCTCTTGGAAATA GGCGCCAAGG CCAT CCTAGGCGCC GAGGCCGTATTCGCT TERM 763 1236693 - 1236652 - g 71 -7.1 -4.25104 | opp_overlap 1236655, overlap 1236654 1236655 TCTGCTCCACCAAAA TACCCTACGCCTCCGCC GGCAAAGA GGCGGTGGCGGAGGTTC CTGAGATAGAGAAGG TERM 764 1236691 - 1236654 - g 71 -9.7 -3.73042 | opp_overlap 1236655, overlap 1236652 1236655 TGCTCCACCAAAATA CCCTACGCCTCCGCC GGCAAAGA GGCGGTGGCGGAGGT TCCTGAGATAGAGAA TERM 765 1236655 - 1236690 + G 78 -13.2 -3.16564 | opp_overlap 1236655 1236654 1236652 GCTCCACCAAAATAC CCTACGCCTCCGCC GGCAAAGA GGCGGTGGCGGAGG TTCCTGAGATAGAGA TERM 766 1236690 - 1236655 - g 73 -13.2 -2.83504 | opp_overlap 1236655, overlap 1236654 1236652 GCTCCACCAAAATAC CCTACGCCTCCGCC GGCAAAGA GGCGGTGGCGGAGG TTCCTGAGATAGAGA Tneu_1391 1235403 - 1236995 + | DNA topoisomerase VI, B subunit TERM 767 1238073 - 1238049 - g 90 -4.9 -5.3798 | GAAGAAGAAGAAAAA GGTCGAGATAG AGG CCCTCTCTACC CACGGCTTGAAGTTC Tneu_1392 1237036 - 1238139 + | DNA topoisomerase (ATP-hydrolyzing) Tneu_1393 1238179 - 1239186 + | phosphate uptake regulator, PhoU Tneu_1394 1239707 - 1239219 - | hypothetical protein Tneu_1395 1240504 - 1239707 - | ArsR family transcriptional regulator Tneu_1396 1240623 - 1240901 + | DNA-binding protein Alba TERM 768 1241947 - 1241932 - g 76 -5.4 -4.62069 | gap 1, opp_overlap 1241923 1241932, overlap 1241934 GGGCGATGCGAAAAA CG-CGCT TCT AGCGGCG TTTGCGGCTCACCCC TERM 769 1242018 - 1241991 - g 75 -14.2 -2.87564 | gap 1, opp_overlap 1241989 CGATTGCGGTAGACA GCGACGTGGATCC GGA GGACCC-CGTCGC CGTTGAGTGGGCGGT Tneu_1397 1240934 - 1242208 + | UbiD family decarboxylase Tneu_1398 1242218 - 1243360 + | hypothetical protein Tneu_1399 1243353 - 1243760 + | hypothetical protein Tneu_1400 1244701 - 1243898 - | DNA-(apurinic or apyrimidinic site) lyase Tneu_1401 1245716 - 1244667 - | DNA primase, large subunit Tneu_1402 1246818 - 1245745 - | phage head-tail adaptor TERM 770 1246302 - 1246316 + g 85 -7 -4.8667 | opp_overlap 1246292, overlap 1246292 ACGCAGCCTTCCTCG CCACCG AGA CGGCGG TTTTTATGAGATCTA TERM 771 1246560 - 1246574 + g 79 -12.8 -3.48395 | CCTCCCTCCCCACTG CGGCGG TAG CCGCCG TTGTGTAACCCCCCT Tneu_1403 1247725 - 1246805 - | ATPase Tneu_1404 1247813 - 1249090 + | hypothetical protein TERM 772 1249219 - 1249247 + T 75 -5.7 -4.65895 | overlap 1249234 TCCGCGGATGTCTTC GGGGCAGAGCCCC TAG GGTGCACACCCCC TTTTTGCATCCACGG Tneu_1405 1250199 - 1249417 - | metallophosphoesterase Tneu_1406 1250697 - 1250212 - | hypothetical protein TERM 773 1250293 - 1250281 - G 73 -10.5 -3.60805 | opp_overlap 1250281 1250283 AGACCTCATCTTAAA CGGCG GCA CGCCG ACGCTTCTGTGTATG TERM 774 1250878 - 1250895 + r 79 -2.5 -5.24989 | CTTTTCAGATAGCCT GCCGCAG AACT CAGCCGC TTTTTTCCTATCTCC Tneu_1407 1251336 - 1250857 - | ribosomal-protein-alanine acetyltransferase TERM 775 1251510 - 1251531 + H 91 -6.5 -5.36441 | gap 1, overlap 1251510 CTCGATACGCCGGTC CCAGC-GCGC CCG GCGCAGGTGG TTTTTTATCTACAGC Tneu_1408 1251575 - 1254427 + | hypothetical protein Tneu_1409 1254417 - 1254929 + | hypothetical protein TERM 776 1255413 - 1255429 + G 70 -10.8 -3.44848 | opp_overlap 1255394, overlap 1255411 CGGGCCTTCTACTCC GCCGCG CGCCA CGCGGC TCTTTCCTAACGCCG Tneu_1410 1254929 - 1255678 + | hypothetical protein TERM 777 1255826 - 1255855 + F 70 -5.6 -4.39002 | opp_overlap 1255826 TAACAGGTATAAGAA CCTCCTCCATGT CTTTCT ACCCGGGGGAGG TTTTATAGCCCCTTT TERM 778 1255915 - 1255932 + F 89 -11.3 -4.2558 | ACAAACCCCGCGAGA TCCCCTC CAAT GAGGGGA TTTTCGTCCAAGATA Tneu_1411 1255924 - 1257105 + | aminotransferase class I and II Tneu_1412 1257102 - 1257578 + | NUDIX hydrolase Tneu_1413 1258121 - 1257558 - | hypothetical protein Tneu_1414 1258196 - 1259068 + | radical SAM domain-containing protein Tneu_1415 1259111 - 1259416 + | hypothetical protein TERM 779 1259977 - 1259994 + G 71 -6.9 -4.18506 | opp_overlap 1259978, overlap 1259975 1259978 TCGAGGTGCTCTATA ACGCGTC ATCT GACGCGC TTATTTTGAGGATAA Tneu_1416 1259787 - 1260947 + | pullulanase Tneu_1417 1260925 - 1261164 + | hypothetical protein TERM 780 1262338 - 1262348 + G 71 -8.2 -4.13728 | opp_overlap 1262331, overlap 1262336 GCATGGAACCCTGTG CCGC AGG GCGG TTTTACAGATGTCTA Tneu_1418 1261177 - 1263768 + | cell wall anchor domain-containing protein Tneu_1419 1263829 - 1264905 + | binding-protein-dependent transport systems inner membrane component Tneu_1420 1264902 - 1266317 + | binding-protein-dependent transport systems inner membrane component Tneu_1421 1266346 - 1266807 + | ribosomal protein S13 TERM 781 1266882 - 1266858 - g 84 -5.6 -5.00616 | overlap 1266874 GGGCGGTTTAAAAAA GCCGAAGAAG AAATA CCTCGCCGGC AAGCCCAAGAAGATA TERM 782 1266928 - 1266906 - g 76 -9.9 -3.73302 | overlap 1266899 GAAGATATGGAACAA GCAGCTCCT ATTGG AGGAGCTAC AGCTAATGGGCGAGT TERM 783 1267241 - 1267272 + G 78 -5 -4.7497 | opp_overlap 1267223 1267219, overlap 1267219 TCCACGGCCACATAG CCGTGGCCGGGAGA AGGG TCTCCTCCCCAGGG TTTTTAGTGCCTAGG Tneu_1422 1266841 - 1267320 + | ribosomal protein S4 TERM 784 1267597 - 1267581 - g 90 -5.8 -5.1861 | gap 1, overlap 1267582 1267584 GGTAGGACGAAAAAA GCAGGCG CCGT CGCC-GC CGTGGGGGCCGTCAA TERM 785 1267786 - 1267814 + G 78 -13.8 -3.14132 | AGGAGGCTAGACGGG GCCGGTGGCCCT ATAGG AGGTCCGCCGGC TTAATAGGAGACACG Tneu_1423 1267317 - 1268225 + | peptidase T2 asparaginase 2 Tneu_1424 1268447 - 1268244 - | hypothetical protein TERM 786 1268405 - 1268424 + g 71 -5.6 -4.37991 | overlap 1268406 ACTCTACGGGGAGTC TGCGGAGG ACGT CCTCCACG TTTTGCCTCTTTTTC Tneu_1425 1268837 - 1268484 - | hypothetical protein Tneu_1426 1268868 - 1269584 + | hypothetical protein TERM 787 1269635 - 1269666 + T 71 -7.8 -4.09864 | CTCAGCCCGGTTAGA GCGGCGGAGGACCC AGCC GGGTCTGCCGAGGC TTTTAACCCGTAGGT Tneu_1427 1270293 - 1269718 - | HAD family hydrolase Tneu_1428 1270962 - 1270729 - | hypothetical protein Tneu_1429 1271120 - 1270962 - | RNA polymerase Rbp10 TERM 788 1271040 - 1271064 + g 70 -10 -3.53224 | gap 1 GTAGGGGCACCTGAT GCCGGGGA-GG ATCT CCATCTCCGGC TTTGAGAACACCCTC Tneu_1430 1271643 - 1271128 - | cytidyltransferase-like protein Tneu_1431 1272578 - 1271772 - | arginase/agmatinase/formiminoglutamase Tneu_1432 1273452 - 1272571 - | cation diffusion facilitator family transporter TERM 789 1272937 - 1272913 - G 80 -9.9 -4.0162 | opp_overlap 1272924, overlap 1272916 GCCGTATATCACAAA CACTGCGGCGA CCT CCGCCACGGTG AGGTGGAGGAGGTTG Tneu_1433 1273527 - 1275278 + | glycyl-tRNA synthetase Tneu_1434 1275307 - 1275657 + | hypothetical protein TERM 790 1276034 - 1276053 + G 85 -6.4 -4.82901 | gap 1, opp_overlap 1276034 GGGCCCCGGCATAGA CCACGCGCC GAT GGTG-GTGG TTTTTCTAGAGCCAG Tneu_1435 1275654 - 1276205 + | tRNA intron endonuclease Tneu_1436 1276228 - 1276848 + | hypothetical protein Tneu_1437 1277235 - 1276849 - | heat shock protein Hsp20 Tneu_1438 1277507 - 1277283 - | hypothetical protein TERM 791 1277842 - 1277855 + G 83 -4.5 -5.0916 | TGTCCAGATGGCGGA GCGTA AGCT TGCGC TTTTTATCTTCGCGG TERM 792 1277969 - 1277959 - g 71 -8.2 -4.07687 | opp_overlap 1277962, overlap 1277960 AGGGGCTGTCCAAAA CGCG CCT CGCG AAATCGCTAGGATGC Tneu_1439 1277552 - 1278268 + | nitroreductase Tneu_1440 1278299 - 1278640 + | hypothetical protein TERM 793 1279606 - 1279593 - g 73 -5.2 -4.60797 | TCTCCACATAGAAAA CGCC GTTATA GGCG ACGTGACCCTCTACG Tneu_1441 1278664 - 1279953 + | actin/actin family protein Tneu_1442 1279956 - 1280552 + | actin-like protein Tneu_1443 1280581 - 1280751 + | hypothetical protein TERM 794 1282214 - 1282199 - g 71 -5.4 -4.30014 | gap 1 GCCACGAAGGCAAAA GCGC-AG GAG CTCGCGC TTGAGAGGGAGGAGG Tneu_1444 1280729 - 1283116 + | SMC domain-containing protein Tneu_1445 1284094 - 1283375 - | transcriptional regulator, TrmB Tneu_1446 1284177 - 1285898 + | radical SAM domain-containing protein Tneu_1447 1287740 - 1285905 - | hypothetical protein Tneu_1448 1288501 - 1287737 - | ABC transporter related Tneu_1449 1289628 - 1288492 - | hypothetical protein TERM 795 1288744 - 1288734 - G 74 -6.8 -4.30576 | CGGCTATTATGAAAA CCTC TAC GAGG AGGGAGAGAGCGAGG Tneu_1450 1289682 - 1292273 + | hypothetical protein Tneu_1451 1292316 - 1292498 + | hypothetical protein Tneu_1452 1292495 - 1293106 + | hydrolase Tneu_1453 1293131 - 1293352 + | hypothetical protein TERM 796 1293774 - 1293762 - g 71 -7.7 -4.08216 | GGAGCTCGCCGAAAA CCTCT CGA AGAGG GGGCACGAGGTACAT Tneu_1454 1293355 - 1294344 + | PP-loop domain-containing protein Tneu_1455 1294987 - 1294328 - | amino acid-binding ACT domain-containing protein Tneu_1456 1295061 - 1297460 + | aminoacyl-tRNA synthetase class Ia Tneu_1457 1299686 - 1297452 - | DEAD/DEAH box helicase domain-containing protein TERM 797 1298915 - 1298889 - G 90 -14.4 -3.58726 | GCCCTCTATACACAA TGAGGCGAGGCG CGC CGCCTCGGCCCA CTTAGACCTAAACTT TERM 798 1298999 - 1299013 + g 70 -10 -3.53811 | CGACGTTGATCCTGT CGCTGT CGA ACAGCG TTTGGGCGAACTCGG Tneu_1458 1300762 - 1299683 - | major facilitator transporter Tneu_1459 1301253 - 1300759 - | hypothetical protein Tneu_1460 1301331 - 1301723 + | ferric uptake regulator family protein TERM 799 1302253 - 1302242 - g 71 -7.2 -4.21974 | opp_overlap 1302247, overlap 1302243 GCACGAGCTAATAAA GGCG GGCA CGCC CGTCGAGCTATATGA Tneu_1461 1301919 - 1303169 + | FAD dependent oxidoreductase Tneu_1462 1303166 - 1303336 + | hypothetical protein Tneu_1463 1303386 - 1304525 + | succinyl-CoA synthetase, beta subunit Tneu_1464 1304522 - 1305400 + | succinyl-CoA synthetase, alpha subunit Tneu_1465 1305637 - 1305377 - | hypothetical protein Tneu_1466 1305724 - 1306884 + | GntR family transcriptional regulator Tneu_1467 1306881 - 1308092 + | threonine dehydratase Tneu_1468 1308118 - 1308834 + | threonyl/alanyl tRNA synthetase SAD TERM 800 1309034 - 1309058 + G 81 -7.8 -4.60487 | gap 1, overlap 1309025 GGGGCGGCAGCTGGG GGCCGGCGGCT TCTC ACCCGC-GGCC TTTTTCGCCGTAATC TERM 801 1309254 - 1309268 + G 73 -10 -3.65314 | overlap 1309205 TCTCTCACCTCGCTG GAGGAC GCC GTCCTC TTCTTCACCCTTAGC TERM 802 1309826 - 1309803 - g 74 -12.5 -3.14211 | overlap 1309820 ATCCTGGCCTACCAA CTCGGCGTT ATCAAA AACGCCGAG CTGGCGCTGGCGCTC TERM 803 1309838 - 1309820 - g 78 -6.7 -4.72272 | gap 1, overlap 1309803 CGGCGTTATCAAAAA CGCCGAGC TGGC GCT-GGCG CTCGCCATAGCTCCG Tneu_1469 1308834 - 1310336 + | sodium/hydrogen exchanger Tneu_1470 1310663 - 1310289 - | hypothetical protein TERM 804 1310695 - 1310682 - H 91 -9.5 -4.78848 | opp_overlap 1310680 1310686 1310688, overlap 1310684 GCTTTAAATACAAAA CGCGG CTGG CCGCG CCGTCTTGTCATATC Tneu_1471 1310746 - 1311720 + | hypothetical protein Tneu_1472 1312531 - 1311710 - | metal dependent phosphohydrolase Tneu_1473 1312667 - 1312978 + | CutA1 divalent ion tolerance protein Tneu_1474 1312971 - 1314206 + | phosphonopyruvate decarboxylase-related protein Tneu_1475 1314857 - 1314213 - | hypothetical protein TERM 805 1314260 - 1314276 + g 81 -4.4 -4.87626 | gap 1, opp_overlap 1314254 1314257 GCCTAGCAAGCAGGT GCTGCGC CACG GC-CAGC TTTTTCCTCTTCACA Tneu_1476 1315757 - 1314999 - | hypothetical protein TERM 806 1315055 - 1315065 + g 78 -4.6 -4.7657 | ACTCCACCACCTCTG CTCG TGC CGGG TTTTTCACGTTTTTC Tneu_1477 1315805 - 1317004 + | acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase Tneu_1478 1317708 - 1317001 - | nitroreductase Tneu_1479 1317833 - 1318159 + | hypothetical protein Tneu_1480 1318143 - 1318862 + | methyltransferase type 11 Tneu_1481 1319787 - 1318828 - | hypothetical protein Tneu_1482 1320077 - 1319784 - | hypothetical protein TERM 807 1319961 - 1319942 - G 70 -3.4 -4.65895 | opp_overlap 1319930 TCTCGCAGTCAAAAA CCGCGTCG TTGT CGATGTGG ATAGTAAAGACGTGC Tneu_1483 1320763 - 1320131 - | hypothetical protein Tneu_1484 1321146 - 1320763 - | hypothetical protein TERM 808 1321166 - 1321191 + H 83 -14.8 -3.21099 | overlap 1321162 ATATCTTTTTCGCCT GTCCCTAGGC TGTTGC GCCTAGGGAC TTCCTCCTCGCCCAC TERM 809 1321420 - 1321392 - H 88 -16.7 -3.14683 | AGAGCCCCTCACCAA CCTCCTCCCGCAC CGC GGGCAGGAGGAGG AGGTTCCCCGTGGGT TERM 810 1323273 - 1323330 + G 79 -14.7 -2.91395 | gap 1, opp_overlap 1323264 1323261 1323263, overlap 1323273 AAAGAGGCGCGCTGG GCGAT-GCGCCGGCGGCGCTCCAGCTCC TCA GGGGCAGGGGCGTGGACGACGTAATCGC CTTTCTAGAGGAGGT TERM 811 1323273 - 1323331 + G 73 -8.7 -3.86015 | gap 2, opp_overlap 1323264 1323261 1323263, overlap 1323273 AAAGAGGCGCGCTGG -GCGAT-GCGCCGGCGGCGCTCCAGCTCC TCA GGGGCAGGGGCGTGGACGACGTAATCGCC TTTCTAGAGGAGGTG Tneu_1486 1322984 - 1323454 + | hypothetical protein Tneu_1487 1323473 - 1323673 + | hypothetical protein Tneu_1488 1324266 - 1325513 + | hypothetical protein Tneu_1489 1325765 - 1326682 + | hypothetical protein Tneu_1490 1326683 - 1327018 + | hypothetical protein TERM 812 1327175 - 1327157 - f 70 -10.2 -3.36175 | AAGCGCCATCTACAA CCCAGCGG AGG CCGCTGTG CGGTACCTGCAACTG Tneu_1491 1327457 - 1327609 + | exosome complex exonuclease Rrp41 TERM 813 1327971 - 1328008 + G 85 -16.9 -2.96031 | gap 1, overlap 1327973 1328003 1328005 TTGTCCTACGTGCAG GTCGCCGGCGGGCCGCCG CCT CGGCGGCCC-CCCACGGC GTTGTTTGAACTAAG TERM 814 1327973 - 1328009 + G 100 -18 -3.9392 | gap 2, overlap 1327971 1328003 1328005 GTCCTACGTGCAGGT CGCCG-GCGG-GCCGCCG CCT CGGCGGCCCCCCACGGCG TTGTTTGAACTAAGA Tneu_1492 1327596 - 1328246 + | hypothetical protein Tneu_1493 1328910 - 1328269 - | hypothetical protein Tneu_1494 1329344 - 1328892 - | hypothetical protein Tneu_1495 1329804 - 1329337 - | hypothetical protein Tneu_1496 1331579 - 1329807 - | ABC transporter related Tneu_1497 1331846 - 1331622 - | hypothetical protein Tneu_1498 1332907 - 1331843 - | glycosyl transferase family protein TERM 815 1332927 - 1332937 + H 70 -5.4 -4.4009 | GTGAGCGACCTCGGC CCTT TTA AAGG TTTTATAAGGTCAGC Tneu_1499 1333040 - 1333549 + | CopG/DNA-binding domain-containing protein Tneu_1500 1333579 - 1333863 + | hypothetical protein Tneu_1501 1334576 - 1333851 - | hypothetical protein Tneu_1502 1334618 - 1335622 + | sugar phospate transferase Tneu_1503 1338412 - 1335599 - | DEAD/DEAH box helicase domain-containing protein Tneu_1504 1338424 - 1338957 + | hypothetical protein Tneu_1505 1339782 - 1338934 - | CBS domain-containing protein TERM 816 1339497 - 1339538 + g 71 -5.7 -4.41956 | CGACGGGGGTGTCTG GCTTGGCGGTGATCACG CTACGCGT CCCGATCTCCGCCACGC TTTTCATGTATATAT TERM 817 1339557 - 1339576 + g 75 -2 -4.87665 | overlap 1339558 TCATGTATATATCGC TGTAGAGG GAGC CCTCCGCG TTTTTATCGCTCACC Tneu_1506 1340396 - 1339836 - | RdgB/HAM1 family non-canonical purine NTP pyrophosphatase TERM 818 1340080 - 1340036 - G 70 -3.6 -4.63218 | overlap 1340037 1340038 TCTCGCCCAAGAAAA CCTTCACAT-CGCCGCCGACGC AGA GCG-CAGCGGCGCACCTAAAAA CCGCGCTTCTGTTCT Tneu_1507 1341149 - 1340397 - | glutaredoxin-like domain-containing protein Tneu_1508 1341559 - 1341170 - | hypothetical protein Tneu_1509 1342514 - 1341588 - | lactate/malate dehydrogenase TERM 819 1342391 - 1342413 + g 82 -14.8 -3.16177 | TGTGGTTTAAGTCGA GGGCCTCGCC CTG GGGGAGGCCC TTCACTATATCGACT Tneu_1510 1343908 - 1342562 - | FAD-dependent pyridine nucleotide-disulphide oxidoreductase Tneu_1511 1344359 - 1343937 - | thioredoxin domain-containing protein TERM 820 1344228 - 1344210 - G 70 -4.4 -4.51763 | opp_overlap 1344222 GAAGAACATAACAAA GGCCGTCT TGC AGCTGGCC ACCGCGTTTCTGAGC TERM 821 1344284 - 1344301 + g 84 -5.5 -4.93296 | CAGGCGCGTAGCTGA CGTTGCA ACAC TGCGGCG TTTTTCTGCTCGTCA TERM 822 1345096 - 1345079 - g 70 -4 -4.58395 | GCTACGGCCTAAAAA CCGCCG ATGTCG CCGCGG TAGCTCTTCTAACTA TERM 823 1345277 - 1345288 + G 77 -3.6 -4.92314 | opp_overlap 1345261, overlap 1345261 CCGTGGGCGTGCTCA TGCC GCTC GGCG TTTTTGTAGGTTACT Tneu_1512 1344439 - 1345320 + | 4-hydroxybenzoate polyprenyltransferase Tneu_1513 1346401 - 1345274 - | major facilitator transporter Tneu_1514 1346951 - 1346361 - | ribosomal protein L6 Tneu_1515 1348932 - 1347544 - | gamma-glutamyltransferase TERM 824 1347589 - 1347603 + g 74 -7 -4.36914 | overlap 1347567 TATGTCTGCAACCGC GGCCAC CGT GGGGCC TTTTCTCGCGGCGGC TERM 825 1348144 - 1348156 + g 73 -10.5 -3.61398 | TAGATAGCGGTCGCG GGCCC AGT GGGCC TTCTTCAACGCCGAC Tneu_1516 1350574 - 1349057 - | GMP synthase, large subunit TERM 826 1350614 - 1350602 - R 71 -4.9 -4.57837 | ACATTGGGTTAAAAA TCTAT TCT ATAGA CAGCACATCTAGCTC Tneu_1517 1351838 - 1350603 - | THUMP domain-containing protein TERM 827 1351247 - 1351266 + g 72 -11.4 -3.34344 | TCAGCTTGAGGTAGA CCCCCTCT ATGA GGAGGGGG TTCCTTACCACGTCC Tneu_1518 1352335 - 1351859 - | hypothetical protein TERM 828 1352148 - 1352131 - G 72 -11.3 -3.32997 | opp_overlap 1352147 TTCGGAGAAAGCCAA CCGACGA CTCC TCGTCGG GGAAAAGCCTCTTTA Tneu_1519 1353633 - 1352332 - | GTP-binding signal recognition particle TERM 829 1353442 - 1353456 + g 74 -5.6 -4.44974 | overlap 1353422 AGGCGGTATACCGGC GGGGGG CTT CTCCTC TTTTATCCGCTTTAC Tneu_1520 1354508 - 1353663 - | putative circadian clock protein, KaiC Tneu_1521 1355000 - 1354587 - | methyltransferase type 11 Tneu_1522 1356076 - 1354979 - | major facilitator transporter TERM 830 1355755 - 1355730 - G 70 -12.5 -2.85351 | opp_overlap 1355729 GCCGCCGAGATTATA GCGTCGCGCGC CGGC GTGCGCAACGC CTTGCTGAACCTCTC Tneu_1523 1356186 - 1356380 + | hypothetical protein Tneu_1524 1356675 - 1356346 - | RNA polymerase Rpb6 Tneu_1525 1358377 - 1356716 - | thermosome TERM 831 1358424 - 1358406 - R 82 -6 -4.96848 | TTGTGCATATAAAAA CTTTTCGC AGA GTGAAAAG CGGCTTAACGCTGGT Tneu_1526 1359334 - 1358429 - | thiamine pyrophosphate binding domain-containing protein Tneu_1527 1360479 - 1359331 - | pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein Tneu_1528 1360745 - 1360476 - | pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit Tneu_1529 1360871 - 1361404 + | pyruvate/ketoisovalerate oxidoreductase, gamma subunit Tneu_1530 1362750 - 1361401 - | nucleotide sugar dehydrogenase TERM 832 1361767 - 1361784 + g 71 -8.3 -4.13767 | GGCTATTCTCGCCGA CGCGGGG TTAA CCCCCCG TTTTAACATAGCGCG TERM 833 1362591 - 1362601 + g 75 -8.2 -4.27117 | CCTCTGGGTACTCTA CGCG CCC CGCG TTTATCTTCTCGACC Tneu_1531 1362797 - 1363504 + | beta-lactamase domain-containing protein TERM 834 1363729 - 1363712 - g 84 -3.3 -5.21709 | CCGTAGACGAAAAAA CGCGCAG GGGG CTACCCG TCGAGCAACACCGCA Tneu_1532 1363501 - 1364007 + | hypothetical protein TERM 835 1364509 - 1364492 - g 77 -3.3 -4.96848 | GCCCCCACACAAAAA GACTTCG ATGC CGTAGCC AAGGCGATGGCCAAG Tneu_1533 1364030 - 1364644 + | hypothetical protein Tneu_1534 1364719 - 1365711 + | eRF1 domain-containing 1 protein Tneu_1535 1365914 - 1365726 - | paREP4 Tneu_1536 1366114 - 1366620 + | Miro domain-containing protein Tneu_1537 1367144 - 1366617 - | hypothetical protein Tneu_1538 1367979 - 1367188 - | polyprenyl synthetase TERM 836 1367403 - 1367413 + g 78 -6.8 -4.61231 | ATAAGACCCCGAGGA GCTG ACC CAGC TTTTTGGCGCTGTCG TERM 837 1367833 - 1367862 + g 75 -13.7 -2.94099 | gap 1, opp_overlap 1367832 1367837, overlap 1367835 1367837 AAAGGTGAGAAGCAG GAGAGGCCTGAGTA GCT TGC-CAGGCCTCTC TATGTAGTAACGGAC TERM 838 1368052 - 1368064 + r 81 -4.7 -5.12707 | GCTTTCACTTTGTAG CGGCC TTC GGCGG TTTTTTCGACTTTAC Tneu_1539 1368224 - 1368033 - | hypothetical protein Tneu_1540 1368307 - 1368759 + | 6,7-dimethyl-8-ribityllumazine synthase Tneu_1541 1369746 - 1368763 - | ketol-acid reductoisomerase TERM 839 1368984 - 1369000 + g 73 -10.1 -3.60805 | overlap 1368974 GTCCTCCGTATTTCG CGGTGTC TGA GACGCCG TTTAACATGCCGTAT Tneu_1542 1369992 - 1369759 - | acetolactate synthase small subunit Tneu_1543 1371625 - 1369979 - | thiamine pyrophosphate protein central region TERM 840 1370105 - 1370117 + g 81 -7.7 -4.59109 | opp_overlap 1370104 GGTCATGTCAACTAT CAACG GCT CGTTG TTTTTCAAAGCTCTG TERM 841 1370746 - 1370771 + g 81 -6.1 -4.79223 | gap 1 CCTCTTTTGCATCGG CGACGATGCCGA CGG TCGGC-TTGACG TTTTTACTGATCTCG Tneu_1544 1372218 - 1371769 - | NUDIX hydrolase Tneu_1545 1372264 - 1372755 + | hypothetical protein Tneu_1546 1373009 - 1372752 - | hypothetical protein Tneu_1547 1373181 - 1373011 - | hypothetical protein Tneu_1548 1374949 - 1373672 - | beta-lactamase domain-containing protein TERM 842 1373966 - 1373987 + g 76 -8.8 -4.09243 | overlap 1373956 GGCTTGGAAGGAGGG CAGGAAGA TGCCGT TCTTCCTG TTTTGCGCCAATCTC Tneu_1549 1375153 - 1375521 + | ribosomal protein L24 Tneu_1550 1375525 - 1376241 + | ribosomal protein S4E domain-containing protein Tneu_1551 1376669 - 1376238 - | hypothetical protein TERM 843 1376283 - 1376297 + g 72 -2.8 -4.74132 | overlap 1376282 ATATACGTCGGCCAT CTTCTT AGC GAGGAG TTTTTCCTCAGCTCT Tneu_1552 1377855 - 1376881 - | oligopeptide/dipeptide ABC transporter, ATPase subunit Tneu_1553 1378825 - 1377857 - | oligopeptide/dipeptide ABC transporter, ATPase subunit TERM 844 1377966 - 1377977 + g 71 -7.2 -4.1822 | opp_overlap 1377963, overlap 1377963 GGATGGAAGCGACAG CCCG ACGG CGGG TTTATTAGGCTAGGC TERM 845 1378926 - 1378954 + G 74 -13.1 -3.18945 | overlap 1378924 1378921 AGTATACACGTCGTC TGGGGTCTCCCGG AGG CTCGGAGGCCCCA TCTATTATGCGTCGC Tneu_1554 1378873 - 1379643 + | ribokinase-like domain-containing protein Tneu_1555 1380481 - 1379621 - | signal transduction protein TERM 846 1381185 - 1381173 - g 70 -3.3 -4.59773 | opp_overlap 1381176, overlap 1381174 TCTGAGGTGGAAAAA CTCGG GGG CCGAC AGCTTCCTCTTGAGG Tneu_1556 1380624 - 1381559 + | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding TERM 847 1382114 - 1382126 + G 74 -6.9 -4.42386 | overlap 1382112 GCCTTGCTCGCGCCG CCGGG GGC CTCGG TTTTGTACATAGCGG Tneu_1557 1381556 - 1382566 + | aminotransferase class V Tneu_1558 1382571 - 1383350 + | hypothetical protein Tneu_1559 1383753 - 1383334 - | hypothetical protein TERM 848 1383547 - 1383585 + g 100 -10.3 -5.0133 | gap 1 TTGCAAGCCGGTTAT TTCAATGGGGGC-GCTCC TCTC GGAGCCGCCGCCGCTGAA TTTTTTGAGCAGATC Tneu_1560 1385197 - 1383950 - | tRNA adenylyltransferase Tneu_1561 1385754 - 1385194 - | 2'-5' RNA ligase Tneu_1562 1386191 - 1385751 - | MarR family transcriptional regulator Tneu_1563 1387122 - 1386226 - | zinc finger TFIIB-type domain-containing protein TERM 849 1386446 - 1386464 + g 76 -6.6 -4.46212 | opp_overlap 1386438 1386437, overlap 1386447 1386448 AGAATATCCACGGCG ATGCGGAG AAC CTCCGCGG TTTTCTCATCCCCAA Tneu_1564 1387364 - 1387119 - | H/ACA RNA-protein complex component Gar1 Tneu_1565 1387516 - 1387911 + | ribosomal protein S8E Tneu_1566 1387908 - 1388195 + | ribonucleoprotein complex SRP, SRP19 component TERM 850 1388728 - 1388701 - g 78 -9.9 -3.90744 | gap 1 CGTCGCGGTAAACAA GGCCGACCTCCT ATCGG AGGAGG-CGACC GTCACTATAAACAAC Tneu_1567 1388192 - 1388944 + | protein of unknown function ATP binding Tneu_1568 1389231 - 1388929 - | ribosomal protein L21e Tneu_1569 1389317 - 1389655 + | RNA polymerase Rpb4 Tneu_1570 1389652 - 1390233 + | putative nucleotide binding protein Tneu_1571 1390632 - 1390234 - | translation initiation factor eIF-5A Tneu_1572 1391504 - 1390662 - | methylthioadenosine phosphorylase Tneu_1573 1391536 - 1392027 + | hypothetical protein TERM 851 1392154 - 1392178 + F 79 -7.1 -4.82901 | overlap 1392156 GGTCAAAACAGAGGG GCGGAGGTCTT CCA AACACCTCCTC TTTTTGTCAACGACA TERM 852 1392156 - 1392176 + F 73 -8.3 -4.03995 | overlap 1392154 TCAAAACAGAGGGGC GGAGGTCTT CCA AACACCTCC TCTTTTTGTCAACGA Tneu_1574 1392379 - 1392765 + | translation initiation factor SUI1 Tneu_1576 1393571 - 1393014 - | hypothetical protein Tneu_1575 1392743 - 1393084 + | hypothetical protein TERM 853 1393086 - 1393103 + gT 83 -7.7 -4.71061 | gap 1 GAGGAGGTGTCTAAT GCCG-CGT AAA ACGGCGGC TTTTTCCCTCTGAGT Tneu_1577 1395475 - 1393568 - | arginyl-tRNA synthetase TERM 854 1393825 - 1393872 + g 78 -13.4 -3.27164 | gap 1, opp_overlap 1393814 1393834 1393835 1393853, overlap 1393834 TAAGCTCCCGCTCCT CCGGC-AGAATCTCGCCGGGGAT AAC AACGCCGGCGAGGTTTGCGCCGG TTGCCTTCTCTAGTA TERM 855 1393834 - 1393862 + g 74 -10.9 -3.55622 | opp_overlap 1393834 1393835 1393853, overlap 1393825 GCTCCTCCGGCAGAA TCTCGCCGGGGAT AAC AACGCCGGCGAGG TTTGCGCCGGTTGCC TERM 856 1395661 - 1395649 - g 81 -6.3 -4.74453 | TAACACAGGTAAAAA TCAAG GTG CTTGA GGGGAGAGACAAAGG Tneu_1578 1395543 - 1395776 + | ribosomal protein S28e Tneu_1579 1395773 - 1395949 + | ribosomal protein L24E Tneu_1580 1396406 - 1395951 - | ribosomal protein L7Ae/L30e/S12e/Gadd45 Tneu_1581 1397528 - 1396437 - | inner-membrane translocator TERM 857 1397046 - 1397022 - G 100 -17.9 -3.56099 | opp_overlap 1397022 1397024, overlap 1396999 CACAACGGCGCCAAA CACGCCGCAAG CAA CCTGCGGCGTG TATGTGGAGACGACT TERM 858 1397022 - 1397046 + g 81 -15.7 -2.87211 | opp_overlap 1396999 1397022, overlap 1397024 CACAACGGCGCCAAA CACGCCGCAAG CAA CCTGCGGCGTG TATGTGGAGACGACT TERM 859 1397024 - 1397044 + g 72 -12.5 -2.98823 | opp_overlap 1397022, overlap 1397022 CAACGGCGCCAAACA CGCCGCAAG CAA CCTGCGGCG TGTATGTGGAGACGA Tneu_1582 1398493 - 1397525 - | inner-membrane translocator TERM 860 1397899 - 1397946 + g 70 -10.2 -3.48276 | opp_overlap 1397936 TACCCACCGCCCTAG CCAGATACAG-GTTATCAATGC TAGCCC GCAT-GATAACGCCGTATCTGG TTCTATACAGCAGGA TERM 861 1399264 - 1399248 - g 95 -13.7 -4.0371 | CATCCTCTATAGAAA CGACGCC TGG GGCGTCG GCCTTAAAGACGCCA Tneu_1583 1398619 - 1399971 + | extracellular ligand-binding receptor Tneu_1584 1400002 - 1400769 + | ABC transporter related TERM 862 1400776 - 1400796 + T 75 -9.6 -3.80625 | opp_overlap 1400770, overlap 1400777 GGGAGATGACCGCGC TCCCCGCC CTAAA GGCGGGGC TTTCGGTTGTAAAGC TERM 863 1400777 - 1400795 + T 74 -13.1 -2.88054 | opp_overlap 1400770, overlap 1400776 GGAGATGACCGCGCT CCCCGCC CTAAA GGCGGGG CTTTCGGTTGTAAAG TERM 864 1400870 - 1400819 - T 78 -6.3 -4.70879 | gap 1, overlap 1400821 TGTAAAGCTTAAAAA TACCCCGCCGGGGGGAG-TCGGCC GGGGT GGCCGAGCGGCCCAAGGCGCGGGA CTGGAGATCCCGTCC TERM 865 1400868 - 1400821 - T 73 -8.9 -3.9654 | gap 1, overlap 1400819 TAAAGCTTAAAAATA CCCCGCCGGGGGGAG-TCGGCC GGGGT GGCCGAGCGGCCCAAGGCGCGG GACTGGAGATCCCGT Tneu_1586 1402338 - 1401610 - | ABC transporter related TERM 866 1402589 - 1402574 - g 71 -6.8 -4.20084 | gap 1, overlap 1402575 AGTAGCTATGCAAAA CTGGCGC AGT GCGCC-G CGGAGTTGGCGGTAG Tneu_1587 1402397 - 1403677 + | extracellular ligand-binding receptor Tneu_1588 1403960 - 1404415 + | aspartate carbamoyltransferase, regulatory subunit Tneu_1589 1404412 - 1404993 + | orotate phosphoribosyltransferase Tneu_1590 1404981 - 1405868 + | dihydroorotate dehydrogenase Tneu_1591 1406334 - 1405846 - | hypothetical protein TERM 867 1406375 - 1406345 - R 77 -3.3 -5.03715 | gap 2 ACCACGTTGAAAAAA TCTGCTCCACCTCCT CCC AGGGGATGG-GC-GA TCCGCGGCCCTCCTC Tneu_1592 1408169 - 1406328 - | hypothetical protein TERM 868 1406643 - 1406682 + g 86 -12.8 -3.90318 | gap 1, opp_overlap 1406646 1406649, overlap 1406647 CTTGCCATATATCAT GAAGGAGCC-GCGGGCTAG GTA CTGGCCCGCCGGCGCTTGC TTTGTGACCTGCTCG TERM 869 1406647 - 1406678 + g 90 -14.4 -3.61244 | gap 1, opp_overlap 1406646 1406649, overlap 1406643 CCATATATCATGAAG GAGCC-GCGGGCTAG GTA CTGGCCCGCCGGCGC TTGCTTTGTGACCTG TERM 870 1406676 - 1406649 - G 73 -13.4 -2.81256 | gap 1, opp_overlap 1406647 1406643, overlap 1406646 ATATATCATGAAGGA GCC-GCGGGCTAG GTA CTGGCCCGCCGGC GCTTGCTTTGTGACC TERM 871 1407440 - 1407459 + g 91 -7.9 -4.7629 | overlap 1407451 AGTAGTAGTCTAGAG CTTCCCA GAAGTG TGGGAAG TTTTTAACTTCGTCG TERM 872 1408213 - 1408228 + r 71 -4.6 -4.59109 | ATTAGCGTTATGTGG CAAGGC TAAC GCCGTG TTTTTCGAGGATCTC Tneu_1593 1409035 - 1408205 - | xylose isomerase domain-containing protein TERM 873 1409781 - 1409769 - g 74 -6.9 -4.30576 | overlap 1409771 GGGGGAGTACCAAAA GGCCC TGG AGGCC TTCCCAAGGGGGTTC TERM 874 1410108 - 1410132 + G 100 -15.7 -4.59773 | opp_overlap 1410111 CGTGAAGGTGTTGAA GGAGGAGGGCT TGG AGCCCTCCGCC TTTTTACAGATGCCG TERM 875 1410129 - 1410111 - g 77 -14.6 -2.71681 | opp_overlap 1410108 GAAGGTGTTGAAGGA GGAGGGCT TGG AGCCCTCC GCCTTTTTACAGATG Tneu_1594 1409083 - 1410321 + | tRNA pseudouridine synthase D TruD TERM 876 1411098 - 1411068 - g 84 -10.3 -4.15565 | overlap 1411069 CGTAGTAGGCGAAAA CTGCGCCGAGGTG GACTA CGCCACGGCGCAA GCCCTTGGCGTAAGC Tneu_1595 1410457 - 1411254 + | hypothetical protein Tneu_1596 1411342 - 1411776 + | ribosomal protein L14b/L23e Tneu_1597 1411842 - 1412162 + | hypothetical protein Tneu_1598 1412144 - 1412515 + | hypothetical protein Tneu_1599 1413861 - 1412551 - | adenosylhomocysteinase TERM 877 1413343 - 1413388 + g 81 -14 -3.32521 | gap 1, overlap 1413323 1413334 1413381 GCGGAGCCTCAGCAC GCCTGTGG-TGGTCTCCTCGG TGCCT CCGCGGAGGCCAGCCACGAGC TTCTCGGCGTCTACT Tneu_1600 1413874 - 1414755 + | putative circadian clock protein, KaiC Tneu_1601 1414760 - 1415185 + | hypothetical protein Tneu_1602 1415185 - 1415850 + | B3/4 domain-containing protein Tneu_1603 1417143 - 1415842 - | hypothetical protein TERM 878 1417560 - 1417550 - g 79 -8.2 -4.56597 | opp_overlap 1417539 CGCCGCCGTGAAAAA CGGC TTT GCCG CGTACCTCATAGACC Tneu_1604 1417191 - 1417790 + | hypothetical protein Tneu_1605 1418234 - 1417752 - | hypothetical protein Tneu_1606 1418779 - 1418231 - | thiol:disulphide interchange protein, putative Tneu_1607 1418844 - 1419593 + | hypothetical protein Tneu_1608 1419675 - 1423397 + | ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent Tneu_1609 1423440 - 1423913 + | hypothetical protein Tneu_1610 1423941 - 1424249 + | hypothetical protein TERM 879 1425010 - 1424992 - g 78 -7.4 -4.61199 | overlap 1424978 ACGCCATATACAAAA TAGAGGGC GAG GACCTCTA CCTCATAGCCACCGC Tneu_1611 1424289 - 1425632 + | seryl-tRNA synthetase Tneu_1612 1425735 - 1426256 + | hypothetical protein Tneu_1613 1426240 - 1426893 + | uridylate kinase Tneu_1614 1427314 - 1427733 + | histidine triad (HIT) protein Tneu_1615 1427752 - 1428210 + | LuxR family transcriptional regulator Tneu_1616 1429416 - 1428211 - | GTPase domain-containing protein TERM 880 1429604 - 1429634 + G 90 -14.6 -3.49653 | GAACTCTACACGCCG GCGCTCTCGGCGCT GGG GGCGGCGGGGGCGC TTCTCTCGCCCTACT Tneu_1617 1429448 - 1430659 + | hypothetical protein Tneu_1618 1430689 - 1432659 + | signal transduction protein Tneu_1619 1432691 - 1434904 + | AAA family ATPase, CDC48 subfamily protein Tneu_1620 1434945 - 1435472 + | heat shock protein Hsp20 Tneu_1621 1435918 - 1435469 - | hypothetical protein Tneu_1622 1436021 - 1437115 + | THUMP domain-containing protein Tneu_1623 1437136 - 1437543 + | ribosomal protein S11 Tneu_1624 1437543 - 1437818 + | hypothetical protein Tneu_1625 1437958 - 1439049 + | radical SAM domain-containing protein Tneu_1626 1439080 - 1439736 + | hypothetical protein Tneu_1627 1439736 - 1440500 + | hypothetical protein Tneu_1628 1441122 - 1440457 - | hypothetical protein Tneu_1629 1441339 - 1441145 - | paREP4 Tneu_1630 1441736 - 1442548 + | aldo/keto reductase Tneu_1631 1442536 - 1443063 + | GCN5-related N-acetyltransferase Tneu_1632 1443102 - 1443329 + | hypothetical protein Tneu_1633 1443798 - 1444721 + | Rad51 domain-containing protein Tneu_1634 1445549 - 1444860 - | hypothetical protein TERM 881 1445244 - 1445279 + g 87 -10.3 -4.3739 | CAAGATACCCTCGAG CTCGGCGTAGGGCAC CCTCTT GAGCACTTCGCCGAG TTTTCTACAAGCCTC Tneu_1635 1446931 - 1445546 - | CoA-binding domain-containing protein Tneu_1636 1447015 - 1447725 + | hypothetical protein Tneu_1637 1448291 - 1447722 - | hypothetical protein TERM 882 1447976 - 1447962 - G 86 -12.8 -3.90328 | overlap 1447952 GACAAGGCCTATAAA GCCGCC GAG GGCGGC CGCCGCGGCGCCGCC Tneu_1638 1448389 - 1448847 + | hypothetical protein Tneu_1639 1450762 - 1448831 - | hypothetical protein TERM 883 1449323 - 1449274 - G 100 -14.3 -4.38154 | gap 1, opp_overlap 1449273 1449272 ATAGCTTGTAGAAAA CGCCGAGGGCCTCC-CTCCTCC TGAGAAC GGCGGAGCGGAGAACCTCAGCG AATTTCTCCAGGCAA TERM 884 1449387 - 1449339 - G 87 -17.4 -3.05715 | gap 1, opp_overlap 1449342 1449345, overlap 1449373 AATTTCTCCAGGCAA CGCGCCGGCGCCCGCCTTGCGTC TATT AACGCAAGGCGGGC-CAGGAGCT CGGCCCCCTCCTCCT Tneu_1641 1451170 - 1451331 + | ribosomal protein L40e Tneu_1642 1451617 - 1451318 - | hypothetical protein Tneu_1643 1451925 - 1451617 - | hypothetical protein Tneu_1644 1452067 - 1453278 + | basic membrane lipoprotein TERM 885 1453940 - 1453924 - g 73 -4.4 -4.58283 | gap 1, overlap 1453925 GAAGGGGGGTAAAAA CGGC-TG AGTT CACGCCG CCCTACGACCCCAAG Tneu_1645 1453278 - 1454714 + | ABC transporter related TERM 886 1455436 - 1455452 + G 84 -11.5 -4.12188 | CGTAGGCGCAGTCGC CGCTGGC CTA GCCGGCG TTTTACAGGTGGTCG Tneu_1646 1454711 - 1455718 + | inner-membrane translocator TERM 887 1456422 - 1456443 + G 72 -11.5 -3.37959 | overlap 1456435 TTCCAACTGGAACCC GGCGTTGGC GGTC GCCGGCGCC TTCGTGTTCGGCTTC Tneu_1647 1455715 - 1456614 + | inner-membrane translocator Tneu_1648 1456642 - 1456989 + | heat shock protein Hsp20 Tneu_1649 1457414 - 1456986 - | hypothetical protein Tneu_1650 1457675 - 1457439 - | hypothetical protein Tneu_1651 1458432 - 1457656 - | uridine phosphorylase Tneu_1652 1458683 - 1458441 - | hypothetical protein Tneu_1653 1459624 - 1458680 - | mevalonate kinase Tneu_1654 1460649 - 1459624 - | ribosomal protein L10 Tneu_1655 1461351 - 1460683 - | ribosomal protein L1 Tneu_1656 1461851 - 1461348 - | ribosomal protein L11 Tneu_1657 1462346 - 1461882 - | transcription antitermination protein NusG Tneu_1658 1462645 - 1462346 - | hypothetical protein Tneu_1659 1463592 - 1462675 - | signal recognition particle-docking protein FtsY Tneu_1660 1463991 - 1463593 - | prefoldin, alpha subunit Tneu_1661 1464229 - 1463993 - | ribosomal LX protein Tneu_1662 1464933 - 1464268 - | translation initiation factor eIF-6 Tneu_1663 1465205 - 1464930 - | ribosomal protein L31e TERM 888 1465546 - 1465576 + H 75 -2.5 -5.05113 | opp_overlap 1465549, overlap 1465555 AGGCTCGTGGACCAA AAAGCCCTAGC CCCAGTACA GCTCGGGCTTC TTTTCTTTATCTGGC TERM 889 1465573 - 1465549 - H 74 -4.9 -4.72272 | opp_overlap 1465546 1465555 CTCGTGGACCAAAAA GCCCTAGCC CCAGTAC AGCTCGGGC TTCTTTTCTTTATCT TERM 890 1465555 - 1465573 + H 76 -6.6 -4.60302 | opp_overlap 1465549, overlap 1465546 GACCAAAAAGCCCTA GCCCCAGT ACA GCTCGGGC TTCTTTTCTTTATCT Tneu_1664 1465709 - 1466473 + | radical SAM domain-containing protein TERM 891 1467058 - 1467018 - g 74 -11.2 -3.51934 | gap 1, overlap 1467016 CCCCGTGGATAAACA CTTCATGCGGACAGCCCCA AAGC TGGGGCTCTCCGG-CGAAG CTCCTCGGGCTGAGC Tneu_1665 1466470 - 1467213 + | HhH-GPD family protein Tneu_1666 1467335 - 1468468 + | tryptophanyl-tRNA synthetase Tneu_1667 1468700 - 1468461 - | deoxyribonuclease TERM 892 1468777 - 1468807 + H 70 -11 -3.02461 | overlap 1468796 ACTCTAGGTCGCAGG GCCCGTAGCTCAGC CTG GTAGAGCGGCGGGC TCTTAGGGGCGGTTG TERM 893 1468929 - 1468908 - H 78 -5.8 -4.7657 | CAAAAAGCTTAAAAA CTCGGGGA AGGACG TCCCCCAG GGCCCGTAGTCTAGC Tneu_1668 1469063 - 1469488 + | hypothetical protein Tneu_1669 1469510 - 1470535 + | AAA ATPase Tneu_1670 1470659 - 1471411 + | inositol monophosphatase Tneu_1671 1471395 - 1471781 + | zinc finger SWIM domain-containing protein Tneu_1672 1472496 - 1471918 - | hypothetical protein Tneu_1673 1472655 - 1473656 + | hypothetical protein Tneu_1674 1473689 - 1474351 + | phosphoribosyltransferase Tneu_1675 1475568 - 1474348 - | MoeA domain-containing protein TERM 894 1475706 - 1475687 - H 88 -10.6 -4.41348 | opp_overlap 1475685 1475699 TGTCGGCGAAACAAA CCCCGCCC TCTT GGGCGCGG CCATCTATATTTATA Tneu_1676 1475743 - 1476033 + | protein of unknown function DUF701, zinc-binding putative TERM 895 1476398 - 1476421 + G 84 -11.6 -4.0641 | opp_overlap 1476396 ACCGCGTATGTAATC GTCGGCGACG GCGG CGCCGCCGGC TTTGTATCCATGAGC Tneu_1677 1476020 - 1476739 + | geranylgeranylglyceryl phosphate synthase Tneu_1678 1476891 - 1476736 - | ribosomal protein L39e Tneu_1679 1477253 - 1476921 - | DNA-binding TFAR19-related protein Tneu_1680 1477729 - 1477253 - | ribosomal protein S19e TERM 896 1477758 - 1477774 + H 72 -2.3 -4.96848 | overlap 1477759 CCCCGATTTATAAGA TTTTTGC CTC GTAAAAG TTTTTATATACCACC Tneu_1681 1477807 - 1478139 + | transcription termination factor Tfs Tneu_1682 1478244 - 1478993 + | proliferating cell nuclear antigen PcnA Tneu_1683 1478990 - 1479928 + | DNA primase, small subunit Tneu_1684 1479921 - 1480397 + | hypothetical protein Tneu_1685 1480435 - 1480710 + | ribosomal protein L44E Tneu_1686 1480712 - 1480915 + | ribosomal protein S27E TERM 897 1481615 - 1481567 - g 70 -10.8 -3.4678 | AGCCCTACATGAGAA GTACCCCGGCGTCTCCGCGAAG ATATA CGTCGTGGGGCCCCCGAGGTAC CGCGTAGACCTCGTG Tneu_1687 1480944 - 1481738 + | translation initiation factor 2, alpha subunit Tneu_1688 1481735 - 1481959 + | RNA-binding protein Nop10p Tneu_1689 1484301 - 1481956 - | dolichyl-diphosphooligosaccharide--protein glycotransferase TERM 898 1482673 - 1482643 - G 93 -15.5 -3.53761 | opp_overlap 1482633 1482632 GAACTGCTTTGTAAA TATGGCGGCGCCT ACCTG AGGCGGCGCCATA AACGCAAGGCCTATT Tneu_1690 1484502 - 1484332 - | hypothetical protein Tneu_1691 1485040 - 1484546 - | hypothetical protein TERM 899 1484686 - 1484708 + g 73 -10.4 -3.66844 | CCAGCCTAACCTCCC GGCAGCCGGC CAA GGCGGCGGCC TTCTTGACGTCTACG TERM 900 1485166 - 1485197 + G 72 -12.2 -3.05384 | AGCCCGGAGGCCGCT CGCCCTCTGCGACG CCGG CGACGTAGACGGCG TTGCCTCCGCCGCCC Tneu_1692 1485122 - 1486072 + | Fis family transcriptional regulator TERM 901 1487091 - 1487067 - g 82 -11.3 -3.96148 | CCTCCTGAGGATAAA GGCGACGCCGG TGC CCGTCGTGGCC TCGGAATACGCCGCC TERM 902 1487439 - 1487412 - g 71 -8.4 -4.04206 | gap 1, overlap 1487436 1487437 GGAGCGCGAGATAAA GGCGCTCCCCGAC CTA GCCAGGAAG-GCC GTGGAGAACACGGCG Tneu_1693 1486123 - 1487925 + | glucosamine--fructose-6-phosphate aminotransferase, isomerizing TERM 903 1488025 - 1487979 - g 76 -7.2 -4.56597 | overlap 1487983 GGCCCCTTCGAAAAA CTGACGGGCCCCCTCCC-CAAG ACCTA CGTGAGGGTGGGAGGCCG-CAG GCTCTACCAATACGC Tneu_1694 1487925 - 1489016 + | nucleotidyl transferase TERM 904 1489068 - 1489049 - f 71 -4.3 -4.53602 | overlap 1489051 1489053 1489056 CCCACACCAAAGAAA CAGACGA GCCCGG TCGTCTA GCGGCCAAAGGACAA TERM 905 1489490 - 1489475 - f 71 -8.2 -4.01888 | ATGCCAGAGGATAAA GGCGCG GATG CACGCC TCAACCCCCACCACC Tneu_1695 1489630 - 1490700 + | hypothetical protein Tneu_1697 1493939 - 1492596 - | hypothetical protein Tneu_1698 1494652 - 1493936 - | paREP2b Tneu_1700 1496195 - 1496677 + | hypothetical protein TERM 906 1497770 - 1497758 - g 74 -3.3 -4.85822 | ATTATAAACATAAAA GAGGC ACC GGCTC CATCGCCTTATGTGG TERM 907 1498079 - 1498122 + G 70 -12.2 -2.96711 | gap 1, opp_overlap 1498067, overlap 1498083 ATACCGTGGCGCCTA GCGGCGCTGGAGGCCG-CGGC AAT GGCGACGGCCATCTCCGCCGC TGTCTACGTTGTCAA Tneu_1701 1497137 - 1498162 + | hypothetical protein Tneu_1702 1498724 - 1499173 + | hypothetical protein TERM 908 1499219 - 1499230 + F 72 -2.2 -4.96501 | ACCCATCTTTTTCTC TCGA CGTC TCGG TTTGTTTTTCTGCAA TERM 909 1499404 - 1499444 + GF 89 -15.4 -3.28712 | gap 1, overlap 1499415 GGGCTTTGTCTTTCT GGCC-ACAGCCGCCTCGGC GGTG GCCGCCGCGGTTGTCGGCC TTCTCCCCGGGAGGA TERM 910 1499415 - 1499435 + GF 81 -13.9 -3.34233 | overlap 1499404 TTCTGGCCACAGCCG CCTCGGCGG TGG CCGCCGCGG TTGTCGGCCTTCTCC TERM 911 1499483 - 1499528 + GF 93 -11.7 -4.42653 | overlap 1499485 GGGGGGCTGGATCTG CTGGAGCTGTTCCACAGACGC GGGG GCGTCTGCGTCGCGGCTCCTG TTTTGTACGTCGCGT TERM 912 1499485 - 1499526 + GF 85 -12.9 -3.82117 | overlap 1499483 GGGGCTGGATCTGCT GGAGCTGTTCCACAGACGC GGGG GCGTCTGCGTCGCGGCTCC TGTTTTGTACGTCGC Tneu_1703 1499246 - 1499935 + | hypothetical protein TERM 913 1499988 - 1499956 - gf 71 -6.4 -4.25283 | gap 2 ACGTCGTGACGAAAA TCCTGCT-CCTCC-TC GCA GATGGACGTAGCAGGA GAGAGGCGGCGCTGC Tneu_1704 1499907 - 1500182 + | hypothetical protein TERM 914 1500223 - 1500203 - f 72 -9.6 -3.6268 | opp_overlap 1500200 1500199 1500203, overlap 1500204 CAACGCAAACGACAA GCCCCGCC TTTAG GGCGGGGG TGGATTTAAGCTATT TERM 915 1500222 - 1500204 - f 74 -13.1 -2.76885 | opp_overlap 1500203 1500200 1500199, overlap 1500203 AACGCAAACGACAAG CCCCGCC TTTAG GGCGGGG GTGGATTTAAGCTAT Tneu_1705 1500251 - 1500904 + | hypothetical protein Tneu_1706 1501347 - 1500901 - | hypothetical protein TERM 916 1501400 - 1501387 - H 70 -9.5 -3.50832 | opp_overlap 1501385, overlap 1501385 GTTTAAATTTAAACA CGCCC TAAA GGGCG AAGCTTTCTGTTGTA TERM 917 1501507 - 1501497 - H 70 -3.2 -4.69512 | overlap 1501499 AAAAGACAAAAATAA CCGT GGA ACGA GGCTCCCCTATGCGG TERM 918 1502161 - 1502181 + G 72 -11.1 -3.31461 | TCGCCAGAGAGGTGA CGCCTGTGG AGC CCAGAGGCG TTGTAGCCGTCGATG Tneu_1707 1501584 - 1502846 + | transposase IS605 OrfB Tneu_1708 1503508 - 1502969 - | hypothetical protein TERM 919 1503924 - 1503896 - R 73 -8.1 -4.18488 | ATTCATTTCAAGAAA TTTCAGCGACTTC AGC GGAGGCGCCGAAA AAACCTGAAGTAAGT Tneu_1709 1504541 - 1504128 - | hypothetical protein Tneu_1710 1504731 - 1504513 - | hypothetical protein TERM 920 1504782 - 1504761 - R 91 -12.9 -4.1235 | overlap 1504762 CAACGCAAACAACAA GCCCCGCCC TTCA GGGCGGGGA GGGGGTCATCCCTCT TERM 921 1504781 - 1504762 - R 88 -16.4 -3.06326 | overlap 1504761 AACGCAAACAACAAG CCCCGCCC TTCA GGGCGGGG AGGGGGTCATCCCTC TERM 922 1504833 - 1504856 + r 74 -10.9 -3.70417 | overlap 1504810 1504854 CCACATCTGCGCCTG CCGGCGTGG ACGCGG CCCCGCCGG TTTAAATCGTGTCGT Tneu_1711 1505062 - 1504871 - | hypothetical protein Tneu_1712 1505336 - 1506400 + | hypothetical protein TERM 923 1506406 - 1506427 + F 93 -12.9 -4.27117 | overlap 1506407 1506415 1506417 ACGGAAATGACCTCC TCCCCGCCC TAGA GGGCGGGGC TTTCTGTTGTAGCGA TERM 924 1506407 - 1506426 + F 88 -16.4 -3.15788 | overlap 1506406 1506415 1506417 CGGAAATGACCTCCT CCCCGCCC TAGA GGGCGGGG CTTTCTGTTGTAGCG TERM 925 1506865 - 1506845 - f 77 -10.3 -3.80625 | overlap 1506846 TTTTTACAACCGAAA GCCCCGCCC TTC AGGCGGGGA GGCGGGTCAGCTGTC TERM 926 1506864 - 1506846 - f 76 -13.8 -2.88054 | overlap 1506845 TTTTACAACCGAAAG CCCCGCCC TTC AGGCGGGG AGGCGGGTCAGCTGT TERM 927 1507338 - 1507322 - g 88 -7.3 -5.0133 | opp_overlap 1507326, overlap 1507323 1507333 CAGCTGGCGAAAAAA CTTGGCT ACA AGCCAAA CGAGGTGAGGTTCGG TERM 928 1507819 - 1507805 - g 78 -2.8 -5.1101 | overlap 1507807 GCAGTATTTAAAAAA GATGTT AAT AACAAC GACTTTGAAGTCCAG TERM 929 1508530 - 1508517 - g 76 -5.3 -4.63928 | ATATTATTGCAAAAA CCAAT GTTT ATTGG TCGCCATTTTATTAT Tneu_1713 1506989 - 1508626 + | hypothetical protein Tneu_1714 1509334 - 1508705 - | hypothetical protein Tneu_1715 1509627 - 1509313 - | hypothetical protein Tneu_1716 1510024 - 1509650 - | endoribonuclease L-PSP TERM 930 1509827 - 1509847 + g 81 -5.4 -4.74285 | gap 2, opp_overlap 1509801 GTCCTCCAGGTTGTA GCCG-GC-GG CCT CCAGCACGGC TTTTATGTTCTCCAT Tneu_1717 1510069 - 1510674 + | isochorismatase hydrolase TERM 931 1511311 - 1511276 - T 71 -11.8 -2.75844 | overlap 1511275 CGCCGGAGTTGAAAC GTTCACCCGCCTGACG GCGC CGTCGGGCAAGTGAGC CGAAATAGTTAAGAG TERM 932 1511589 - 1511600 + T 82 -5.8 -4.91109 | overlap 1511588 GTTCCTAGCTTATAC GACG GCGG CGTC TTTTTCTGATCGCGA TERM 933 1511839 - 1511782 - T 86 -14.9 -3.28712 | opp_overlap 1511788 1511799, overlap 1511785 GCGGCCTCTTCACAA CAGCGCTCCCGACTCAACCGCCCGACG GCGC CGTCAGGCAGTTGAGTCAAAATAGTTG AAAGGGTATTTCCGG TERM 934 1511836 - 1511785 - T 80 -15.2 -2.52623 | opp_overlap 1511788 1511799, overlap 1511782 GCCTCTTCACAACAG CGCTCCCGACTCAACCGCCCGACG GCGC CGTCAGGCAGTTGAGTCAAAATAG TTGAAAGGGTATTTC Tneu_1720 1513435 - 1512434 - | putative RNA methylase TERM 935 1512748 - 1512769 + g 72 -2.9 -4.78933 | gap 1, overlap 1512748 CCACCTGGGGGTAGC GG-GCCGTGT TTA AGGCGGCGCC TTTTATGTGTTTTAG TERM 936 1512968 - 1512978 + g 85 -3.2 -5.40072 | overlap 1512958 1512947 GGCGCGCCAGGGCCT GTCT TTG AGGC TTTTTTTGGCCACGG TERM 937 1513004 - 1513031 + g 76 -9.3 -4.04474 | gap 1, overlap 1512986 CACGGTGATCCACAC CGT-GACGTAGT TGTGT ACTACGTCGACG TTTATCTCGACGTCT TERM 938 1514690 - 1514726 + G 71 -9.4 -3.71284 | gap 1 ATGGTGGTGAAGGTG CCGGCGGGGATGAGG GAGGAGGA CCTCG-CCCGGCCGG TTATCTTGGTCAAGG Tneu_1721 1513478 - 1515034 + | PilT domain-containing protein Tneu_1722 1515031 - 1515810 + | methyltransferase type 11 Tneu_1723 1516663 - 1515800 - | ribonuclease Z TERM 939 1516109 - 1516121 + g 70 -10.5 -3.48924 | opp_overlap 1516108 CCCCGTGTAGAGCAG GCGGC GTA GCCGC TTGTGTCCAGGCTCC Tneu_1724 1517365 - 1516682 - | dimethyladenosine transferase Tneu_1725 1517398 - 1519221 + | aspartyl-tRNA(Asn) amidotransferase, B subunit TERM 940 1519874 - 1519825 - g 75 -13.5 -2.88249 | overlap 1519856 CACATCGGCCACAGA TCCGGCATCACGGAGGAGAGCTT GAGG AAGATCGCGGCCGAGATGCCGGA GGAGAGGGTGAAGAG Tneu_1726 1519243 - 1520505 + | Pre-mRNA processing ribonucleoprotein Tneu_1727 1520543 - 1521250 + | non-specific serine/threonine protein kinase Tneu_1728 1522286 - 1521237 - | FAD-dependent pyridine nucleotide-disulphide oxidoreductase Tneu_1729 1522949 - 1522395 - | cytidylate kinase TERM 941 1522589 - 1522605 + g 71 -8.7 -3.81447 | CCCTCACCTCTCTAA GGGCTTC CTC GAAGCTC TTCTTGTCGCGTATG Tneu_1730 1523207 - 1522953 - | ribosomal protein L34e TERM 942 1523020 - 1523006 - G 77 -3.4 -5.00616 | overlap 1523007 CCTTGTGTGAAAAAA CGCCGC CGT ACGGCC TAGTCGGCGCTCTGT Tneu_1731 1523285 - 1524619 + | translation elongation factor EF-1, subunit alpha Tneu_1732 1526242 - 1524668 - | hypothetical protein Tneu_1733 1526587 - 1526282 - | hypothetical protein Tneu_1734 1527514 - 1526603 - | hypothetical protein TERM 943 1526801 - 1526815 + g 81 -5.6 -4.77036 | overlap 1526797 GGTGAGGCCGCGTCG GGCGAG CGC CTCGGC TTTTTCGTCCTGCCG TERM 944 1527386 - 1527408 + g 77 -7.6 -4.4195 | GGACCCCCAGACGGG CCGGCCTGAC GCG GTTGCGCCGG TTTTCTCCGCTATCT Tneu_1735 1529315 - 1527501 - | DNA topoisomerase type IA central domain-containing protein TERM 945 1529444 - 1529416 - g 73 -10.1 -3.58565 | opp_overlap 1529427, overlap 1529410 1529408 CAAAGAACAGGACAA GCCGCTGAGGAGG CCG CCTCCGCCGCGCC AGCCGCCGGTGCAGC Tneu_1736 1529387 - 1529848 + | hypothetical protein Tneu_1737 1531574 - 1529850 - | DEAD_2 domain-containing protein TERM 946 1530063 - 1530075 + g 71 -6.2 -4.3739 | opp_overlap 1530062 CTGGTATAGATAGAC GGCG CCCCA CGCC TTTTCTCCCAGCCTA TERM 947 1530382 - 1530350 - G 71 -6.9 -4.15565 | opp_overlap 1530358, overlap 1530359 CGTAGGAGGGGAAAA CCGCCAACACGCCGC CCG GCGATATGTTGATGG CGTGTGCAAGCCTCC TERM 948 1531724 - 1531691 - g 80 -3.8 -5.02074 | overlap 1531693 GGAGGTTTTAAAAAA CGCGGGTCTCAC AGACGTCAAA GTGAGAGCCGAG TTCCACCTCTCCTCC Tneu_1738 1531605 - 1532762 + | quinolinate phosphoribosyl transferase Tneu_1739 1533839 - 1532763 - | geranylgeranyl reductase Tneu_1740 1533893 - 1534306 + | hypothetical protein Tneu_1741 1534949 - 1534290 - | 34-dihydroxy-2-butanone 4-phosphate synthase Tneu_1742 1535623 - 1534970 - | 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine 1-reductase TERM 949 1535410 - 1535435 + g 70 -12.5 -2.88544 | ATCCGTCGATTAGCA CGCGGAGGGGG TTCC TCCCCTCCACG TATCTCACGGTGAGC Tneu_1743 1536285 - 1535620 - | GTP cyclohydrolase IIA TERM 950 1535983 - 1535949 - G 72 -11.2 -3.30771 | CCATATGCGCCACAA CGGCTGGCGAGGCGGC TCC GCCCCCTCCTCCGCCG CATCTGAGGTAGGCC Tneu_1744 1536375 - 1537004 + | creatininase Tneu_1745 1537176 - 1536985 - | hypothetical protein Tneu_1746 1537236 - 1538246 + | histone deacetylase superfamily protein Tneu_1747 1539098 - 1538241 - | ribose-phosphate pyrophosphokinase TERM 951 1539147 - 1539133 - R 70 -11.4 -3.02459 | overlap 1539128 GATTTAACAATTACA GCCAGG GGC CCTGGC TACGCGCTCCACTGG Tneu_1748 1539920 - 1539147 - | methyltransferase type 11 Tneu_1749 1540944 - 1539907 - | Sua5/YciO/YrdC/YwlC family protein TERM 952 1540212 - 1540169 - G 100 -23.2 -3.57263 | ACGGCGACCCTCAAA CCCCTCGACCTCAGCGCTGC CGCG GCGGCGCTGAGGTCGAAGTG CACCACGACCAGCGG TERM 953 1540366 - 1540330 - G 73 -10.7 -3.63073 | GATAGGGCCGAAGAA CCTCTCCAGCTCCTCCA CGG TGAAGGGGCCGGGGCGG AGGAGCAGAGGCGGC TERM 954 1540438 - 1540423 - G 76 -6 -4.59773 | CTCCACCCCGAAAAA CGTCGG GCCG CCGTCG ACCACCACGTCTACC Tneu_1750 1540991 - 1541791 + | 6-phosphogluconate dehydrogenase NAD-binding Tneu_1751 1541788 - 1542042 + | hypothetical protein TERM 955 1543176 - 1543162 - gf 78 -2.1 -5.1523 | overlap 1543164 TGGAGAAGATAAAAA GGTTC GGGCT AAACC CGGAGGACTACCAGT Tneu_1752 1542042 - 1543337 + | asparaginyl-tRNA synthetase Tneu_1753 1543312 - 1543917 + | hypothetical protein Tneu_1754 1544774 - 1544397 - | hypothetical protein Tneu_1755 1545806 - 1544814 - | hypothetical protein Tneu_1756 1547511 - 1545799 - | glutamyl-tRNA synthetase Tneu_1757 1548187 - 1547501 - | nucleotidyl transferase TERM 956 1547890 - 1547915 + g 84 -4 -5.24531 | gap 1, opp_overlap 1547881, overlap 1547881 1547878 TTACAACGATGAACA CGTCG-TCTGT TATAT ACGGAGCGGCG TTTTTTATGGCGCCT Tneu_1758 1548277 - 1548489 + | hypothetical protein Tneu_1759 1548486 - 1548623 + | hypothetical protein Tneu_1760 1548620 - 1549045 + | hypothetical protein Tneu_1761 1549042 - 1549371 + | hypothetical protein Tneu_1762 1549394 - 1549813 + | signal-transduction protein TERM 957 1550184 - 1550164 - g 76 -9.7 -4.07568 | overlap 1550165 GCGGCCTTCGTAAAA CTCCAGGAG GGG CTCCCGGAA AGGTTCGAGCACATG Tneu_1763 1549810 - 1550334 + | hypothetical protein Tneu_1764 1551049 - 1550297 - | silent information regulator protein Sir2 Tneu_1765 1551639 - 1550983 - | hypothetical protein TERM 958 1551100 - 1551085 - GR 88 -6.8 -4.93296 | GTAGTAGTATAAAAA CCCCGT CGTC ACGAGG CTGAGAACTATGTAG TERM 959 1551199 - 1551189 - GR 71 -6.8 -4.18494 | overlap 1551198 GATCCCTAGTGAAAA CCTC AAT GAGG TAGGCCCAGGCCACC TERM 960 1551524 - 1551504 - GR 80 -3.1 -5.02074 | overlap 1551507 1551509 1551511 CCAGCCCCGAAAAAA CCACAGACG CGA CGCCCGCCG CCGCCGACGCCGCAT Tneu_1766 1552152 - 1551742 - | hypothetical protein Tneu_1767 1552964 - 1552134 - | extracellular solute-binding protein Tneu_1768 1553110 - 1553304 + | hypothetical protein Tneu_1769 1554397 - 1553264 - | hypothetical protein Tneu_1770 1554450 - 1554758 + | hypothetical protein Tneu_1771 1554791 - 1555012 + | hypothetical protein Tneu_1772 1555009 - 1555776 + | hypothetical protein TERM 961 1555785 - 1555815 + T 70 -9.6 -3.46106 | overlap 1555784 1555771 GACCTAGGGACGCAG CTCTCCGCCTCGTG GAG CACGAGGGGTAGCG TCTTTAGGCTTTTGA Tneu_1773 1556518 - 1555763 - | hydrolase TERM 962 1558263 - 1558277 + G 72 -12.8 -3.06515 | opp_overlap 1558251, overlap 1558264 GAAGGGATGTGGGCG CCCCCC CGC GGGGGG GTTTTCAAGATAGCG TERM 963 1558264 - 1558278 + G 89 -12.8 -4.11216 | opp_overlap 1558251, overlap 1558263 AAGGGATGTGGGCGC CCCCCC GCG GGGGGG TTTTCAAGATAGCGG TERM 964 1558705 - 1558687 - g 71 -6.6 -4.18401 | CGATATACGTCAAAA GCCCTGTG GGA CACGAGGC CGGCCCCGTCAGGAT Tneu_1774 1556589 - 1559006 + | hypothetical protein Tneu_1775 1559013 - 1559408 + | hypothetical protein Tneu_1776 1559426 - 1559758 + | methionyl-tRNA synthetase, beta subunit Tneu_1777 1559736 - 1560452 + | undecaprenyl diphosphate synthase TERM 965 1560454 - 1560479 + F 74 -7.5 -4.26076 | gap 1, opp_overlap 1560454 GGTTCGGCAGATAGA CGCCGTGGA-CT ACG GGCTCCTCGGCG TTTTCCTAGCGGTCC Tneu_1778 1560458 - 1561075 + | SNARE associated Golgi protein TERM 966 1562322 - 1562294 - g 78 -4.5 -4.72986 | gap 2, overlap 1562296 1562299 GACCCTTATCAAAAA CAGGATGGGCGGC GCCGT GCCGCCC--CCGG GCACGCCGGCGAAGG Tneu_1779 1561101 - 1562798 + | methionyl-tRNA synthetase Tneu_1780 1564037 - 1562790 - | RNA modification protein Tneu_1781 1564362 - 1564060 - | hypothetical protein TERM 967 1564598 - 1564562 - gR 79 -12.4 -3.54838 | gap 1, overlap 1564554 1564551 1564549 AACACAGCGATATAA TCGACGTA-GGGGCCAT GTCC ACGGCCCCCTACCTCGA CAGCTGGATACCTCC TERM 968 1564948 - 1564909 - gR 100 -14.4 -4.60487 | gap 1, overlap 1564911 GAGCACTTCGAAAAA TG-CGGGGTCGACCCCA GGAGGGT TGCGGTCGACCCCGGCA TAGGGTTCCCCCTCC TERM 969 1564945 - 1564911 - gR 86 -17.2 -2.61004 | overlap 1564909 GCACTTCGAAAAATG CGGGGTCGACCCCA GGAGGGT TGCGGTCGACCCCG GCATAGGGTTCCCCC Tneu_1783 1565850 - 1565257 - | hypothetical protein Tneu_1782 1564396 - 1565328 + | dihydropteroate synthase TERM 970 1565642 - 1565657 + gT 84 -5.4 -4.91109 | gap 1, overlap 1565637 TACTCCCGACGAGGC GCG-GAG AAC CTCTCGC TTTTTGTCCTCACGC Tneu_1784 1566371 - 1565847 - | THUMP domain-containing protein TERM 971 1566413 - 1566387 - H 70 -10.4 -3.36569 | opp_overlap 1566389, overlap 1566385 GGAAGCCCCCAAAGA CCGTTTATAAAA CAT TTTTATAAACAG CAGGTGGATGTGCCG Tneu_1785 1566428 - 1567186 + | hypothetical protein Tneu_1786 1567377 - 1568330 + | aldo/keto reductase TERM 972 1569228 - 1569215 - g 78 -5.2 -4.82162 | CACAACAAGATAAAA GGCC AGCCGG GGCC GTACATCGAGCCGAC Tneu_1787 1568768 - 1569316 + | NADH-quinone oxidoreductase, B subunit Tneu_1788 1569318 - 1569851 + | NADH dehydrogenase (ubiquinone) 30 kDa subunit Tneu_1789 1570750 - 1570475 - | hypothetical protein Tneu_1790 1571970 - 1570747 - | NADH dehydrogenase (quinone) Tneu_1791 1572400 - 1571957 - | NADH-quinone oxidoreductase, B subunit Tneu_1792 1572850 - 1572491 - | NADH-ubiquinone oxidoreductase subunit TERM 973 1572567 - 1572553 - G 82 -12.8 -3.66429 | AATAACGGGCAACAA CCGCGG CGA CCGCGG CCATGAGGAGGGCTA Tneu_1793 1573806 - 1572844 - | NADH dehydrogenase (quinone) TERM 974 1573006 - 1572985 - G 89 -11.6 -4.1891 | GGCGGGTAAGACAAA GACCGCCA TCTTCG TGGCGGTC ACGGCGGCGCCTAGG Tneu_1794 1574286 - 1573888 - | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Tneu_1795 1575293 - 1574283 - | thiamine pyrophosphate binding domain-containing protein Tneu_1796 1576548 - 1575340 - | pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein Tneu_1797 1577483 - 1576545 - | pyruvate/ketoisovalerate oxidoreductase, gamma subunit TERM 975 1576803 - 1576823 + g 75 -8.1 -4.20749 | opp_overlap 1576791 1576801 ATACGGCAAGCTACT GCCGGGGCC GAC GGCGCCGCC TTTATTCACCTGTTG TERM 976 1577303 - 1577313 + g 83 -4.6 -5.05601 | TAATCGGCTCCTGAT CCTC GAT GGGG TTTTTATCTATCGTG Tneu_1798 1578668 - 1577565 - | NADH/ubiquinone/plastoquinone (complex I) Tneu_1799 1580272 - 1578656 - | NADH/ubiquinone/plastoquinone (complex I) Tneu_1800 1581549 - 1580260 - | NADH/ubiquinone/plastoquinone (complex I) Tneu_1801 1581778 - 1581542 - | hypothetical protein Tneu_1802 1582178 - 1581771 - | hypothetical protein Tneu_1803 1583523 - 1582414 - | inner-membrane translocator Tneu_1804 1584491 - 1583520 - | inner-membrane translocator Tneu_1805 1584539 - 1585930 + | extracellular ligand-binding receptor Tneu_1806 1585902 - 1586642 + | ABC transporter related Tneu_1807 1586639 - 1587340 + | ABC transporter related Tneu_1808 1588619 - 1587333 - | peptidase U62 modulator of DNA gyrase TERM 977 1589194 - 1589210 + H 75 -9.3 -4.04206 | overlap 1589195 CGCTCCCTATCTTCA CCCCGGC GGC GCCGGGC TTTATATACGACTCG TERM 978 1589195 - 1589209 + H 75 -12.8 -3.02202 | overlap 1589194 GCTCCCTATCTTCAC CCCGGC GGC GCCGGG CTTTATATACGACTC TERM 979 1589605 - 1589629 + H 81 -10.6 -4.08767 | CTCCTCACGGCTAGA CCCCCGGCGG CGTAT CCGTCGAGGG TTTTCACGAGCTCCA TERM 980 1589735 - 1589707 - H 74 -10.3 -3.64703 | gap 1 TTCTCCTCACTCAAA GCCAC-AGGGCC TTTCCT GGCCCTAGCGGC GGCCTTGGCGAGCTT TERM 981 1589894 - 1589913 + H 73 -12.1 -2.9914 | overlap 1589895 ACTGGCCGTTTCTCA CGGCGGC CGCCAC GCCGCCG TCTCTCTGCCACCTC Tneu_1810 1590040 - 1591011 + | hypothetical protein Tneu_1811 1591813 - 1590977 - | protoheme IX farnesyltransferase Tneu_1812 1591882 - 1592787 + | dihydrodipicolinate synthetase Tneu_1813 1592787 - 1593440 + | hypothetical protein TERM 982 1593448 - 1593467 + F 95 -16.4 -3.55071 | opp_overlap 1593441 TCGGATAACCGCGCT CCCCGCCC TGAA GGGCGGGG TTTCCCGGGGTCTCG TERM 983 1593638 - 1593659 + F 85 -12.9 -3.80625 | opp_overlap 1593635 1593634 1593638, overlap 1593639 AATAGCTTAAATCTA TCCCCGCCC TAGA GGGCGGGGC TTTCGGTTGTAACGG TERM 984 1593659 - 1593638 - f 73 -12.9 -2.66098 | opp_overlap 1593638 1593639, overlap 1593635 1593634 AATAGCTTAAATCTA TCCCCGCCC TAGA GGGCGGGGC TTTCGGTTGTAACGG TERM 985 1593639 - 1593658 + F 86 -16.4 -2.88054 | opp_overlap 1593638 1593635 1593634, overlap 1593638 ATAGCTTAAATCTAT CCCCGCCC TAGA GGGCGGGG CTTTCGGTTGTAACG TERM 986 1593809 - 1593789 - g 71 -6.1 -4.30978 | overlap 1593790 GTTAATCGAGGAAAA CGGCCCT CTAACCC AGGGCCA GATCGCGAAGGCGAT Tneu_1814 1593715 - 1593954 + | ArsR family transcriptional regulator Tneu_1815 1594741 - 1593926 - | hypothetical protein Tneu_1816 1595535 - 1594738 - | stationary-phase survival protein SurE Tneu_1817 1595885 - 1595565 - | ribosomal protein S10 Tneu_1818 1596003 - 1597160 + | eRF1 domain-containing 2 protein Tneu_1819 1599301 - 1597193 - | SMC domain-containing protein TERM 987 1599181 - 1599195 + g 76 -7.1 -4.56775 | opp_overlap 1599167 AGGCCACGGCCACGG CCTCC ATGAG GGAGG TTTTTCCAGACCCGT Tneu_1820 1600454 - 1599294 - | metallophosphoesterase TERM 988 1600305 - 1600272 - G 78 -10.3 -3.86015 | gap 1, opp_overlap 1600281 1600304 CACGGCCTCCACAAA CTTCACGAGCGCCCTC GTG GAGGGC-CTCTTGAGG TCGAAGAGGTCGCCC Tneu_1821 1602277 - 1600451 - | hypothetical protein Tneu_1822 1603563 - 1602274 - | hypothetical protein TERM 989 1604642 - 1604624 - g 70 -5.2 -4.56702 | overlap 1604625 GGTCAACGAAATAAA GGCGTTGG TGG CCAACAAC GCGCTGTCGATCGCT Tneu_1823 1603680 - 1604786 + | ATPase TERM 990 1605241 - 1605226 - g 77 -4 -4.87626 | gap 1, overlap 1605192 1605190 GGGCAACATCAAAAA CCTGGAG AAG CTC-AGG AGGTCTATAACCAAG TERM 991 1605802 - 1605773 - g 100 -9.1 -4.86822 | AAGGAGATAATAAAA TCCCTCCTGCGGG TCCT CCCCCTGGGGGGA ACCGACATAACGGCG TERM 992 1605925 - 1605940 + G 74 -11.8 -3.54424 | opp_overlap 1605935 1605936, overlap 1605934 1605936 CCCGGAGGTGCTCAA GGCGGC GAAA GCCGCC TTTAGAGAGGTGAAG Tneu_1824 1604783 - 1606063 + | hypothetical protein TERM 993 1606390 - 1606374 - g 88 -6.5 -4.99568 | overlap 1606377 CAAGATGAAACAAAA CAACGTG AGA CACGTAG TCGTCCTGGACAGAG TERM 994 1606387 - 1606377 - g 76 -6.8 -4.56436 | overlap 1606374 GATGAAACAAAACAA CGTG AGA CACG TAGTCGTCCTGGACA Tneu_1825 1606084 - 1606503 + | signal-transduction protein TERM 995 1606764 - 1606795 + G 70 -13 -2.87564 | GTTGGGATTGTGATA GCCGCGGTGGTTGT GGCC ATAGCCGCCGTGGC TCTCTACAAGAATCC Tneu_1826 1606701 - 1607972 + | hypothetical protein Tneu_1827 1609016 - 1608255 - | binding-protein-dependent transport systems inner membrane component Tneu_1828 1609744 - 1609013 - | binding-protein-dependent transport systems inner membrane component Tneu_1829 1610727 - 1609741 - | ABC transporter related TERM 996 1610915 - 1610941 + G 85 -9.2 -4.62069 | opp_overlap 1610906 1610903, overlap 1610920 ACATCAGCGACTTAG GCGCTGCGGCGG CCC CCACCGCCGCTC TTTTTAACATAAGCG TERM 997 1610920 - 1610939 + G 86 -12.1 -3.92746 | opp_overlap 1610903, overlap 1610915 AGCGACTTAGGCGCT GCGGCGG CCCCCA CCGCCGC TCTTTTTAACATAAG Tneu_1830 1610797 - 1611339 + | hypothetical protein Tneu_1831 1611320 - 1611631 + | hypothetical protein Tneu_1832 1612882 - 1611593 - | argininosuccinate lyase Tneu_1833 1613042 - 1612884 - | hypothetical protein Tneu_1834 1614255 - 1613092 - | argininosuccinate synthase Tneu_1835 1614480 - 1614295 - | putative lysine biosynthesis protein Tneu_1836 1615293 - 1614511 - | acetylglutamate kinase Tneu_1837 1616348 - 1615290 - | N-acetyl-gamma-glutamyl-phosphate reductase Tneu_1838 1616908 - 1616345 - | hypothetical protein TERM 998 1616489 - 1616504 + g 76 -6 -4.59773 | overlap 1616482 CTTCAGCACCTCGGC CGCCTC CCCC GTGGCG TTTTTAACAGTGGCA Tneu_1839 1617017 - 1618237 + | threonine synthase TERM 999 1618426 - 1618386 - g 72 -11.2 -3.31144 | overlap 1618388 1618391 GCTGGAGCTTGAGAA GAC-GAGGAGCTACCTCCTC TAC GAGGAGGT-GCTCCACAGAC ACATTGCGGTGGCTA TERM 1000 1618423 - 1618388 - g 82 -14.8 -3.22475 | gap 1, overlap 1618386 1618391 TGGAGCTTGAGAAGA CGAGGAGCTACCTCCTC TAC GAGGAGGT-GCTCCACA GACACATTGCGGTGG TERM 1001 1618420 - 1618391 - g 84 -17.3 -2.80252 | gap 1, overlap 1618388 1618386 AGCTTGAGAAGACGA GGAGCTACCTCCTC TAC GAGGAGGT-GCTCC ACAGACACATTGCGG TERM 1002 1618512 - 1618539 + G 86 -17.8 -2.70932 | GCTCACTCTGCCCAA GGCGGAGTGGTC GACG GACCACTTCGCC TCATTCGGCGAAAGG Tneu_1840 1618243 - 1619226 + | aspartate kinase Tneu_1841 1619242 - 1620258 + | aspartate-semialdehyde dehydrogenase TERM 1003 1620398 - 1620381 - g 85 -5.5 -5.14563 | overlap 1620383 GGCGCCATGAAAAAA GGCGG CTTCACCC CCGCC GAACTGAAGAAGCTC Tneu_1842 1620264 - 1621175 + | homoserine dehydrogenase Tneu_1843 1621241 - 1623241 + | acetate--CoA ligase TERM 1004 1623290 - 1623300 + G 73 -4.6 -4.62783 | TCGCCGGCATATCGT GGCT CGG GGCC TTTTTGGAGTGGCTA Tneu_1844 1623238 - 1625304 + | CBS domain-containing protein Tneu_1845 1626573 - 1625518 - | anthranilate synthase TERM 1005 1627091 - 1627071 - g 77 -11.8 -3.58533 | overlap 1627082 GTAGAAGGCGTGAAA GCCGGCAG ATACG CCGCCGGC TACATCTGGCTCGCG Tneu_1846 1626600 - 1627412 + | hypothetical protein TERM 1006 1627782 - 1627734 - g 82 -9.4 -4.33928 | gap 1, overlap 1627735 TAGGCCAAATACAAA CGCGCCGACGAGCGCCAAGGGCA TATG CGCCCGCGGCG-TCTCCGGCACC TTCAACGCCTGGCTT TERM 1007 1627781 - 1627735 - g 74 -12.9 -3.19634 | gap 1, overlap 1627734 AGGCCAAATACAAAC GCGCCGACGAGCGCCAAGGGCA TATG CGCCCGCGGCG-TCTCCGGCAC CTTCAACGCCTGGCT TERM 1008 1629968 - 1629954 - g 74 -11.4 -3.42996 | GACTATCTACTACAA CTCGCC GAT GGCGAG GGGGGAGGTGCCGTT Tneu_1847 1627513 - 1630689 + | molybdopterin oxidoreductase Tneu_1848 1630686 - 1631384 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein TERM 1009 1632494 - 1632479 - g 71 -6.8 -4.27443 | overlap 1632476 CTAGCATTAAAAGAA GACGAG AGAC CCCGTC GGCTTTTCATACTTA Tneu_1849 1631381 - 1632514 + | hypothetical protein TERM 1010 1632807 - 1632761 - f 70 -12.1 -2.71712 | gap 1, opp_overlap 1632800, overlap 1632760 TGTGGTCGCCGAAAG GCGGCTCTGGGCAGGCCCCGGA CCCT CCCGGGGAG-GCCGGGAGCCGC AAAGGGGGCTCCTTA TERM 1011 1633595 - 1633610 + F 78 -6.2 -4.72986 | GGGACTTCCCTTAAG TGTACA AGAA TGTACA TTTTTCATAGAGATA Tneu_1852 1633798 - 1634904 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Tneu_1853 1635100 - 1634885 - | hypothetical protein TERM 1012 1635400 - 1635424 + G 74 -7.1 -4.36262 | CTACAGGGGGTTGGG TGGCTCGGC GCCCTCG GCCTAGCCA TTTTGATATGGATCT Tneu_1854 1635151 - 1635483 + | hypothetical protein Tneu_1855 1635483 - 1635779 + | hypothetical protein TERM 1013 1635901 - 1635913 + G 78 -2.6 -5.09895 | overlap 1635869 1635883 1635880 GGTCGGCGTGGCGGC CGGC TTGCT GTCG TTTTTTGCCTCCCTG Tneu_1856 1635800 - 1636483 + | hypothetical protein TERM 1014 1636512 - 1636502 - f 70 -5.4 -4.36914 | CCTTTCTTGAGAAAA GCTT ATA AAGC GGTGGTATTTTTAGT TERM 1015 1636683 - 1636702 + G 79 -9.2 -4.21989 | opp_overlap 1636667 TAGGTATGTGGAGCT CGCCACAC TCCT GCGTGGCG TTTGTTCGCGTTGTG Tneu_1857 1636675 - 1636980 + | hypothetical protein Tneu_1858 1636971 - 1637864 + | methyltransferase type 11 Tneu_1859 1638385 - 1637837 - | hypothetical protein Tneu_1860 1638993 - 1638382 - | methyltransferase type 11 TERM 1016 1638998 - 1638987 - G 76 -5.8 -4.70659 | CCCTAGACCTAAAAA CCTC CACA GAGG GAAAAACACGGGATA Tneu_1861 1640167 - 1639160 - | N-acetyl-ornithine/N-acetyl-lysine deacetylase Tneu_1862 1640237 - 1640500 + | Fis family transcriptional regulator Tneu_1863 1640497 - 1640799 + | cupin 2 domain-containing protein TERM 1017 1642147 - 1642111 - g 70 -12.9 -2.90496 | overlap 1642108 GCCGTTTTCAAAGGA CGCCCTGGCGGCTGTGT TAA ACGCAACGGCCAGGGGG GTGAGGGCGGCCTAC Tneu_1864 1641014 - 1642666 + | peptidase S49 TERM 1018 1642665 - 1642694 + T 74 -12.1 -3.07043 | overlap 1642667 1642676 TCTACGTAGGCGGCT GAGCTCCTCCACG AGGA CGGGGAGGAGGTC TCTTGGGATCCTCGC Tneu_1865 1643582 - 1642647 - | phosphoesterase DHHA1 TERM 1019 1643577 - 1643564 - G 70 -3.8 -4.59773 | CGCCATGCGCAAAAA CCGT TAAGAC ACGG CCCATAGAGTTATAA Tneu_1866 1643735 - 1644415 + | ABC transporter related Tneu_1867 1644698 - 1644408 - | hypothetical protein Tneu_1868 1645836 - 1644700 - | AAA ATPase Tneu_1869 1646624 - 1645836 - | type II secretion system protein Tneu_1870 1648099 - 1646621 - | type II secretion system protein E Tneu_1871 1648818 - 1648072 - | type II secretion system protein Tneu_1872 1649318 - 1648848 - | hypothetical protein TERM 1020 1649137 - 1649169 + g 71 -5.5 -4.36914 | opp_overlap 1649147, overlap 1649139 ACGCCTGAGGCCGCG GATGAGGATAGAGAC GCC GCCTCTACCTTCAGC TTTTCTGAGGCGGCC TERM 1021 1649381 - 1649392 + r 71 -7.2 -4.17048 | TACTACACAGTGAGG CGCG TTAA CGCG TTCTTTTCGCCCGGC Tneu_1873 1651196 - 1649385 - | hypothetical protein TERM 1022 1651174 - 1651160 - G 76 -5.6 -4.58685 | AAACCTGTGCAAAAA CCAGGG CAA CCCCAG CCAGAACTAAAAGAA Tneu_1874 1653146 - 1651224 - | hypothetical protein TERM 1023 1652137 - 1652166 + g 73 -4.2 -4.67942 | gap 1, opp_overlap 1652154, overlap 1652138 1652139 ACCGTCACGGTTGCA GG-CGCGCCGCTC ACAGA GAGCGTTGCGATC TTTTGATTTCTTAGC TERM 1024 1652685 - 1652702 + g 77 -3.3 -5.0133 | TAGGTACAGCGCTAT GTTGACG ACGT CGCCGAC TTTTTTCACGAAATA Tneu_1875 1653541 - 1653143 - | hypothetical protein TERM 1025 1654337 - 1654360 + G 74 -5.9 -4.57073 | overlap 1654338 GTGTACGTCTTCATC TTCGCCCTG ACCATA CTGGGCGAG TTTTTCAAGCCGCTC TERM 1026 1654484 - 1654504 + G 74 -12.5 -3.16881 | GTGGGCCCCGAGATG GCCCCGGAG GCG CTCCGGAGC TTCCTAACGTCGCTC Tneu_1876 1653638 - 1654693 + | hypothetical protein Tneu_1877 1654770 - 1654991 + | hypothetical protein Tneu_1878 1655143 - 1655655 + | hypothetical protein TERM 1027 1655837 - 1655856 + F 80 -15 -2.71144 | GGACCTGGGCGCGCG CCGCCGAC TGCT GTCGGCGG TGCTTCGGACAGCTC Tneu_1879 1655978 - 1656847 + | peptidase S1 and S6 chymotrypsin/Hap TERM 1028 1657782 - 1657772 - g 72 -2.4 -4.84359 | overlap 1657773 TCACCGGTATAAAAA GCGG CGA CCCC CCGGGGGACGGGGGG Tneu_1880 1657459 - 1658535 + | uncharacterized linocin/CFP29-like protein Tneu_1881 1659957 - 1658623 - | phosphomethylpyrimidine kinase TERM 1029 1659211 - 1659223 + g 73 -10.5 -3.59979 | GGCCATGGGGTTGAC GGGCC AGT GGCCC TTTCCCCTGGCCACC Tneu_1882 1660723 - 1659992 - | 5-formyltetrahydrofolate cyclo-ligase Tneu_1883 1661360 - 1660716 - | hypothetical protein Tneu_1884 1661474 - 1661641 + | paREP4 Tneu_1885 1661663 - 1661941 + | ArsR family transcriptional regulator Tneu_1886 1662445 - 1661927 - | NUDIX hydrolase TERM 1030 1661972 - 1661986 + g 70 -4.2 -4.54449 | overlap 1661950 1661966 GACGAGGGCCGCCAC GATGGT CTT GCCGTC TTTTATCTCGCCTCT Tneu_1887 1663133 - 1662615 - | syntaxin domain-containing protein TERM 1031 1663156 - 1663169 + r 79 -9.5 -4.04474 | opp_overlap 1663144 1663153 TAACGCCAATGAGGA GGCGG GAGG CCGCC TTTATATGCCGCTGT Tneu_1888 1664314 - 1663334 - | periplasmic solute binding protein Tneu_1889 1664570 - 1665601 + | sodium/calcium exchanger membrane region Tneu_1891 1666797 - 1665853 - | cation diffusion facilitator family transporter Tneu_1890 1665657 - 1665929 + | hypothetical protein TERM 1032 1665906 - 1665929 + gT 83 -2.4 -5.28176 | gap 1, overlap 1665909 GAGGAGATCGAGAAG CAGCTGAAGGA GTC TCCT-CAGTAG TTTTTTGTGGCTCCA Tneu_1892 1667548 - 1666799 - | indole-3-glycerol-phosphate synthase TERM 1033 1666841 - 1666856 + g 78 -4.6 -4.7254 | overlap 1666840 GGCGGCTTTGAGCTC CTTCGC CAGC GCGGGG TTTTTCATGAGGGAT TERM 1034 1667138 - 1667153 + g 71 -6.1 -4.35524 | CCTCTGGGCGTATTC GGCCA GCTCCA TGGCC TTTTCCCTTTCCACC TERM 1035 1667507 - 1667520 + g 85 -3.8 -5.40072 | overlap 1667499 GGGCTCGGTGGAGAG CCGT AGCTCC ACGG TTTTTTTCACGGCAA Tneu_1893 1667722 - 1668384 + | hypothetical protein Tneu_1894 1669177 - 1668374 - | bacitracin resistance protein BacA Tneu_1895 1669214 - 1669732 + | hypothetical protein Tneu_1896 1670494 - 1669841 - | siroheme synthase Tneu_1897 1670633 - 1670836 + | hypothetical protein TERM 1036 1670826 - 1670840 + T 86 -3.5 -5.45726 | overlap 1670827 TTAAGCAGCTCATCG GCCTT AAATA AGGGC TTTTTTTGCGGTCTC TERM 1037 1670848 - 1670861 + T 72 -2.3 -5.00895 | overlap 1670847 ATAAGGGCTTTTTTT GCGGT CTCC ACAGC TTTTTCTATCGTGGC Tneu_1898 1671461 - 1670829 - | uroporphyrinogen III synthase HEM4 TERM 1038 1671405 - 1671423 + gT 70 -9.5 -3.45945 | overlap 1671406 TAGGCAGCGGACGCC GGGGGGG CAACC CCCCTCC TTGATTCTAACTACG TERM 1039 1671406 - 1671420 + gT 74 -12.8 -2.87541 | overlap 1671405 AGGCAGCGGACGCCG GGGGGG CAA CCCCCC TCCTTGATTCTAACT Tneu_1899 1672177 - 1671434 - | uroporphyrin-III C-methyltransferase TERM 1040 1671735 - 1671784 + gH 74 -12.8 -2.87132 | TTCGAGGGGTCCTCC CTCCCCGTGGTCAAAGCCACGG AGCTCG CCGTCCCTCTAACCACGGGGGG TATGTAGAAGCGGGC TERM 1041 1671804 - 1671816 + gH 70 -10.5 -3.28712 | opp_overlap 1671794 TAGAAGCGGGCCGGC GCGGC GAA GCCGC TTGTGACGCCGGGGA TERM 1042 1671982 - 1671999 + gH 80 -9.8 -4.09243 | TCTCCGCCTGCGTGG GGCCGG CGCCCC CCGGCC TTTTACCCACGTCTA Tneu_1900 1672213 - 1673487 + | glutamate-1-semialdehyde-2,1-aminomutase Tneu_1901 1673490 - 1674596 + | radical SAM domain-containing protein Tneu_1902 1674578 - 1675126 + | hypothetical protein Tneu_1903 1676023 - 1675100 - | phosphoribosylformylglycinamidine cyclo-ligase Tneu_1904 1677138 - 1676020 - | amidophosphoribosyltransferase Tneu_1905 1677781 - 1677140 - | phosphoribosylformylglycinamidine synthase I Tneu_1906 1678028 - 1677774 - | hypothetical protein Tneu_1907 1679461 - 1678025 - | phosphoribosylamine--glycine ligase TERM 1043 1679569 - 1679555 - H 87 -10 -4.6526 | ACAAACGTTTAAAAA CAGACG CCG CGTCTG GGCCATGGAGCTCGT Tneu_1908 1679574 - 1680281 + | phosphoribosylaminoimidazolesuccinocarboxamide synthase Tneu_1909 1681202 - 1680267 - | methylenetetrahydrofolate dehydrogenase (NADP(+)) TERM 1044 1681129 - 1681097 - G 82 -9.7 -4.30576 | opp_overlap 1681103 1681115, overlap 1681098 1681099 CGTTGAGGAGCAAAA CGGCGAGCTTCGGCG TTA CGCCGAAGCGCTCAA GCTCTTCCACGTGTC TERM 1045 1681127 - 1681099 - G 76 -14.5 -2.50493 | opp_overlap 1681103 1681115, overlap 1681098 1681097 TTGAGGAGCAAAACG GCGAGCTTCGGCG TTA CGCCGAAGCGCTC AAGCTCTTCCACGTG Tneu_1910 1682019 - 1681186 - | formyl transferase domain-containing protein Tneu_1911 1683358 - 1682093 - | amidophosphoribosyltransferase TERM 1046 1682950 - 1682970 + g 74 -6.7 -4.3467 | overlap 1682951 ACGGCGTGAGCGCCA CCGTGGAGG CCG CCCCCACGA TTTTCCTATAGACCT Tneu_1912 1685442 - 1683361 - | phosphoribosylformylglycinamidine synthase II TERM 1047 1683466 - 1683438 - G 83 -16 -3.04263 | ACCTCACCTCGAACA CGTCGCCGTGCG CCTCC CCCACGGCGACG CCCGGCCCCTCCTCG Tneu_1913 1685585 - 1686067 + | phosphoribosylaminoimidazole carboxylase, catalytic subunit TERM 1048 1686085 - 1686075 - f 76 -5.4 -4.81814 | overlap 1686077 AGCAGTAGAATAAAA TAGC AAG GCTA ACCCCGCCGCCGAAT TERM 1049 1686963 - 1686931 - g 72 -13.4 -2.64091 | gap 1, overlap 1686921 AACCACGTCAGAGCA GTCGC-CGGCCTCCC CCTC AGGAGGCCGCGCGCC TTAGCGCCCACCGCC Tneu_1914 1686133 - 1687209 + | phosphoribosylaminoimidazole carboxylase, ATPase subunit TERM 1050 1687202 - 1687191 - f 71 -4.4 -4.56775 | ACTCGTCCTCAAAAA CTAC GGCA GTAG ACAATAGAAAAAACG TERM 1051 1687757 - 1687779 + G 70 -4 -4.60797 | overlap 1687760 CCGGCCATAGATTTG CGACTTGTCC AGA GGCCAAGGTG TTTTATATCTCAGAC TERM 1052 1688024 - 1688006 - g 72 -13.8 -2.55 | opp_overlap 1688014 1688015 1688020 TAATATCGCAAGGTA GCGGAGGC TAT GCCCCCGC CGACGGGCAGTCGGC Tneu_1915 1687258 - 1688586 + | hypothetical protein Tneu_1916 1689050 - 1688583 - | PaREP1 family protein Tneu_1917 1690463 - 1689282 - | glutamyl-tRNA reductase TERM 1053 1689343 - 1689358 + g 70 -10.4 -3.49771 | overlap 1689341 ACGGCCTCCTCCATC TGGCCG TCCT CGGCCA TCTTCTTCATCTTCT TERM 1054 1690810 - 1690833 + G 78 -13.2 -3.21747 | gap 1 ATAGAGAGGGAGTTC CCGGT-GCCGA TCT TCGGCAACCGG TTCCTACTGAGGTGG Tneu_1918 1690543 - 1691583 + | IMP biosynthesis protein PurP Tneu_1919 1692610 - 1691576 - | IMP biosynthesis protein PurP TERM 1055 1692642 - 1692632 - H 79 -2.4 -5.29782 | GACAGGTATAAAAAA CAGC AAC GCAG CCCAACGTGTTCACC Tneu_1920 1692649 - 1693152 + | hypothetical protein Tneu_1921 1694330 - 1693149 - | proteinase inhibitor I4 serpin TERM 1056 1693288 - 1693304 + g 78 -5.1 -4.75404 | overlap 1693277 1693290 ACGACGGCAGTGGCG GCTGTTG CTA CAACACC TTTTTCATCAGCTTT TERM 1057 1694449 - 1694461 + H 74 -4.7 -4.75372 | TCAGCGCGTAGTCCC CCCCC CCC GGCGG TTTTTCCTAAGTCCT Tneu_1922 1694601 - 1695200 + | hypothetical protein Tneu_1923 1695176 - 1695412 + | hypothetical protein TERM 1058 1695425 - 1695391 - f 88 -15 -3.51161 | overlap 1695380 1695392 1695421 CAAAGCCCTAGACAA GGCGCTAGGCGAGCTA CTG TAGCTCACCAAGCGCG GTCAGGCACAGAACC TERM 1059 1695424 - 1695392 - f 91 -18.5 -2.70215 | overlap 1695380 1695391 1695421 AAAGCCCTAGACAAG GCGCTAGGCGAGCTA CTG TAGCTCACCAAGCGC GGTCAGGCACAGAAC TERM 1060 1696568 - 1696616 + G 78 -10.7 -3.96148 | overlap 1696570 1696571 CACGCCGCCTGTGGC CTACGCGGCGGCGGTGGCCGCCG GTG TGGTCGTAACCGCCTCCGCGCTG TTTATACTAAGGCGC TERM 1061 1696570 - 1696614 + G 77 -11.9 -3.57406 | overlap 1696568 1696571 CGCCGCCTGTGGCCT ACGCGGCGGCGGTGGCCGCCG GTG TGGTCGTAACCGCCTCCGCGC TGTTTATACTAAGGC TERM 1062 1696571 - 1696613 + G 79 -15.4 -2.74122 | overlap 1696570 1696568 GCCGCCTGTGGCCTA CGCGGCGGCGGTGGCCGCCG GTG TGGTCGTAACCGCCTCCGCG CTGTTTATACTAAGG Tneu_1924 1695627 - 1696652 + | hypothetical protein Tneu_1925 1698725 - 1697040 - | dihydroxy-acid dehydratase Tneu_1926 1699797 - 1698754 - | radical SAM domain-containing protein TERM 1063 1700703 - 1700680 - g 80 -10.3 -4.07455 | gap 1 GATGAACATCATAAA CGCAGTGGGG GGCCT CCCCAC-GCG GAACTTCGAGACTGG Tneu_1927 1699877 - 1701760 + | aldehyde ferredoxin oxidoreductase TERM 1064 1701736 - 1701767 + F 77 -2.9 -5.08169 | overlap 1701730 GAGGAGGCTGGGCCT GGAGGAGTTCCAG CACCTC CTGTAAATCCCCC TTTTTTAACATATAT Tneu_1928 1701800 - 1702531 + | NAD(+) kinase Tneu_1929 1702528 - 1702872 + | PilT domain-containing protein Tneu_1930 1703540 - 1702851 - | phosphatidate cytidylyltransferase TERM 1065 1703122 - 1703102 - G 70 -10.4 -3.53444 | TTACGGCGTCGTAAA CCGCCATG CTCAC CACGGCGG CTGGAAGATGCCGAG TERM 1066 1703471 - 1703459 - G 72 -2.6 -4.84359 | GTATCTGGACAAAAA GCGG AACCG CCAC GAGCGCGACGAAGAC Tneu_1931 1704017 - 1703559 - | hypothetical protein TERM 1067 1705183 - 1705173 - g 75 -8.2 -4.1899 | overlap 1705174 CCAGCCGACTTAAAA GCCG CCG CGGC TGAGGCGCTCGTCGC Tneu_1932 1704165 - 1705283 + | tyrosyl-tRNA synthetase Tneu_1933 1706324 - 1705248 - | hypothetical protein TERM 1068 1705332 - 1705348 + g 76 -5.8 -4.68994 | gap 1, opp_overlap 1705332 TCTGCGGTCTAGCAA CGC-GGC TACG GCCAGCG TTTTTACATGGTCGT TERM 1069 1706291 - 1706345 + g 72 -2.5 -4.84529 | opp_overlap 1706288 1706286, overlap 1706293 AGGCGAAGGAGAGCC CCGCCGGACCCGCGCCGACTACTGC CACGC GCACTTGGCGATGTGGCTCCGGCTA TTTTTGCGTTTCTCG TERM 1070 1706293 - 1706343 + g 76 -9.5 -4.03043 | opp_overlap 1706288 1706286, overlap 1706291 GCGAAGGAGAGCCCC GCCGGACCCGCGCCGACTACTGC CACGC GCACTTGGCGATGTGGCTCCGGC TATTTTTGCGTTTCT Tneu_1934 1706397 - 1707818 + | metal dependent phosphohydrolase Tneu_1935 1708139 - 1707810 - | hypothetical protein Tneu_1936 1708200 - 1709036 + | hypothetical protein Tneu_1937 1710073 - 1709033 - | peptidase M24 TERM 1071 1710122 - 1710101 - R 71 -4.3 -4.56597 | TCGTCTGTTTAAAAA CTCTTGCGC ATAC GCTCCAGAG GCACCGGCCTCTCGT Tneu_1938 1710468 - 1710094 - | hypothetical protein Tneu_1939 1710511 - 1711002 + | hypothetical protein TERM 1072 1711101 - 1711085 - g 78 -10.1 -3.88291 | overlap 1711097 1711098 GAGGAGGCTTATAAA CGGCGCT CAA AACGCCG CGCCTCCTGCGGAGC TERM 1073 1711124 - 1711097 - g 71 -7.6 -4.0896 | gap 1, overlap 1711085 1711098 AAACGGCGCTCAAAA CGCC-GCGCCTCC TGC GGAGCCGCTGGCC GACGATCTGCCGGAT Tneu_1940 1710996 - 1711346 + | transcriptional regulator, TrmB Tneu_1941 1711812 - 1711321 - | hypothetical protein TERM 1074 1712122 - 1712136 + G 95 -11.4 -4.57073 | GCTGTGGCAAGCGGC CACGGC ACA GCCGTG TTTTTCCAGAGCATG Tneu_1942 1711951 - 1712448 + | hypothetical protein TERM 1075 1712449 - 1712464 + T 84 -5.4 -5.08824 | gap 1, overlap 1712452 CCGAGGCGGAAGTAG CGCGCTG GGT CAGC-CG TTTTTTCGATGAGCG Tneu_1943 1712999 - 1712427 - | hypothetical protein Tneu_1944 1713031 - 1713909 + | alpha-L-glutamate ligase Tneu_1945 1713938 - 1714132 + | hypothetical protein Tneu_1946 1714283 - 1714122 - | paREP10 Tneu_1947 1714975 - 1714328 - | hypothetical protein Tneu_1948 1715058 - 1715630 + | phage SPO1 DNA polymerase-related protein TERM 1076 1715644 - 1715656 + F 70 -3.4 -4.84363 | AATTTATATAGGGGT TCCA ACTTG TGGA TTTTTCCTGCTTTAG Tneu_1949 1715652 - 1716539 + | hypothetical protein Tneu_1950 1716536 - 1718146 + | hypothetical protein Tneu_1951 1718176 - 1718640 + | hypothetical protein Tneu_1952 1719458 - 1718637 - | protein of unknown function Met10 TERM 1077 1718915 - 1718934 + g 76 -9.2 -4.10178 | overlap 1718921 CCACCTCCGCCACGT CCCCGTGG ACCG CCACGGCG TTTCTGATCTTGTTG TERM 1078 1719631 - 1719609 - g 74 -6.3 -4.48713 | gap 1 TCTAGGAAGAAGAAA GACGC-CGAG GTGG CTCAAGCGTC TGTGGAGGTCAACCC Tneu_1953 1719588 - 1720580 + | DNA repair and recombination protein RadA Tneu_1954 1721157 - 1720555 - | hypothetical protein TERM 1079 1721919 - 1721903 - g 73 -8.7 -3.85817 | opp_overlap 1721909, overlap 1721905 ACGGGCTTGTAGAAA TAGGCAG GGG CTGCCCA AGGGGTTGCGCCTTC Tneu_1955 1721206 - 1722801 + | radical SAM domain-containing protein Tneu_1956 1723232 - 1722798 - | hypothetical protein TERM 1080 1722988 - 1723000 + g 81 -4.7 -4.96848 | overlap 1722989 GCCTTCTCCAGAAGG GGCCC CCT GGGCG TTTTTCTCTCAAAGG TERM 1081 1723482 - 1723517 + G 73 -9.6 -3.87373 | overlap 1723484 GTTCAGGAGCCACGT GAGGAGGCACTTCGCC GTGA GGAGAGGAGCCTCCTA TTTATGCGGCATATG TERM 1082 1723484 - 1723515 + G 79 -12.2 -3.5241 | overlap 1723482 TCAGGAGCCACGTGA GGAGGCACTTCGCC GTGA GGAGAGGAGCCTCC TATTTATGCGGCATA Tneu_1957 1723279 - 1723593 + | zinc finger C2H2-type domain-containing protein Tneu_1958 1723593 - 1724087 + | hypothetical protein Tneu_1959 1724118 - 1724408 + | vacuolar H+transporting two-sector ATPase F subunit Tneu_1960 1724437 - 1725009 + | H+transporting two-sector ATPase E subunit Tneu_1961 1724999 - 1726783 + | H+transporting two-sector ATPase alpha/beta subunit central region Tneu_1962 1726812 - 1727039 + | RNA polymerase Rpb5 Tneu_1963 1727137 - 1730520 + | RNA polymerase Rpb2 Tneu_1964 1730691 - 1733345 + | DNA-directed RNA polymerase subunit A' Tneu_1965 1733342 - 1734481 + | DNA-directed RNA polymerase, subunit A'' Tneu_1966 1734519 - 1734824 + | ribosomal protein L7Ae/L30e/S12e/Gadd45 TERM 1083 1735196 - 1735179 - g 70 -4 -4.59773 | CGCCATTGGGAAAAA CGGGCG TAATAT CGCGCG CGCTAAGATCCTCGC Tneu_1967 1734817 - 1735251 + | NusA family protein Tneu_1968 1735291 - 1735734 + | ribosomal protein S23 (S12) Tneu_1969 1735734 - 1736522 + | RNA polymerase insert Tneu_1970 1736548 - 1736916 + | ribosomal protein L15 Tneu_1971 1736913 - 1737461 + | ribosomal protein L13 Tneu_1972 1737468 - 1737908 + | ribosomal protein S9 Tneu_1973 1737905 - 1738105 + | RNA polymerase, N/8 Kd subunit Tneu_1974 1738147 - 1738407 + | like-Sm ribonucleoprotein core TERM 1084 1739541 - 1739525 - g 83 -4.4 -5.08824 | gap 1 CGGGGAGGTAAAAAA CGA-GGC CGAG GCCATCG CACGGGAGGAGCTCG Tneu_1975 1738404 - 1739612 + | methionine adenosyltransferase TERM 1085 1739752 - 1739731 - T 85 -12.9 -3.80625 | overlap 1739725 1739732 GTTTTACAACCGAAA GCCCCGCCC TTCA GGGCGGGGA GGAGGTCGGAGATCC TERM 1086 1739751 - 1739732 - T 86 -16.4 -2.88054 | overlap 1739725 1739731 TTTTACAACCGAAAG CCCCGCCC TTCA GGGCGGGG AGGAGGTCGGAGATC Tneu_1976 1741583 - 1739829 - | hypothetical protein TERM 1087 1740648 - 1740695 + g 91 -5.5 -5.41143 | gap 2, opp_overlap 1740673, overlap 1740651 TTTCTCCTCAGAGGT CATGTCGCGGTG--CGGCGCG TAGAGAGC CGCGCCGGACATCGCGGCTAG TTTTTTTACAAACTC TERM 1088 1740651 - 1740692 + g 70 -10.2 -3.49966 | gap 2, opp_overlap 1740673, overlap 1740648 CTCCTCAGAGGTCAT GTCGCGGTG--CGGCGCG TAGAGAGC CGCGCCGGACATCGCGGC TAGTTTTTTTACAAA Tneu_1977 1742507 - 1741587 - | protein of unknown function RIO1 Tneu_1978 1742536 - 1743036 + | hypothetical protein Tneu_1979 1743188 - 1743868 + | cytidyltransferase-like protein Tneu_1980 1743859 - 1744554 + | deoxyribonuclease V Tneu_1981 1744709 - 1744906 + | hypothetical protein Tneu_1982 1744947 - 1745225 + | translation elongation factor EF1B, beta and delta chains, guanine nucleotide exchange Tneu_1983 1745258 - 1747453 + | AAA family ATPase, CDC48 subfamily protein Tneu_1984 1747450 - 1747671 + | hypothetical protein Tneu_1985 1747698 - 1748747 + | XPG I domain-containing protein Tneu_1986 1748737 - 1749360 + | protein-L-isoaspartate O-methyltransferase Tneu_1987 1750646 - 1749357 - | aspartyl-tRNA synthetase Tneu_1988 1751195 - 1750674 - | transcription elongation factor NusA-like protein Tneu_1989 1751252 - 1752949 + | radical SAM domain-containing protein Tneu_1990 1753124 - 1752930 - | hypothetical protein Tneu_1991 1753509 - 1753153 - | aminoacyl-tRNA hydrolase TERM 1089 1754165 - 1754153 - g 74 -3.3 -4.82901 | CCTGGCTTATAAAAA CTGTC GAC GGCAG AGAGATAGTTGCGTC TERM 1090 1755494 - 1755516 + G 70 -3.4 -4.72272 | opp_overlap 1755492 CCATAGTAGATAAGG CGGATCCA GCCGCCG TAGATCCG TTTTTAGTGAGACAG TERM 1091 1756033 - 1756020 - g 71 -6.7 -4.25104 | CGGCTTTGACGAAAA CTTGC TTAG GCAAG CCGACTTGGTCGTGT TERM 1092 1756512 - 1756491 - g 75 -8 -4.1891 | CGTGTTTAAGATAAA CGGCACCA GCTATG TGGTACCG CTGAGCTACATAGTT Tneu_1992 1753579 - 1757343 + | peptidase S8 and S53 subtilisin kexin sedolisin Tneu_1993 1757760 - 1757332 - | NUDIX hydrolase Tneu_1994 1758399 - 1757794 - | hypothetical protein TERM 1093 1758071 - 1758061 - G 75 -2.4 -4.88918 | GTACGTGAAAGAAAA CAGG TTG CCGG CTACACGCTTGTTGA Tneu_1995 1759284 - 1758514 - | proliferating cell nuclear antigen TERM 1094 1758884 - 1758867 - G 76 -12.7 -3.3879 | overlap 1758865 AATCTATTTCAAAGA CGGCGTC GAAG GACGCCG AGAGCTCCGGAATCT TERM 1095 1759352 - 1759377 + r 95 -14.8 -3.96148 | opp_overlap 1759343 TAATGAGGACCGTTT GTCCCTAGGC TGTTGC GCCTAGGGAC TTTCTCCTCGCCCCC Tneu_1997 1761031 - 1759973 - | electron transfer flavoprotein alpha subunit TERM 1096 1760533 - 1760549 + g 78 -10.1 -3.98661 | CAGTTGCGATTTGAG GACGCCG TTG TGGCGTC TTTATGGTGACTATC Tneu_1998 1761828 - 1761028 - | electron transfer flavoprotein alpha/beta-subunit TERM 1097 1761217 - 1761240 + g 73 -8.8 -3.97636 | opp_overlap 1761216 1761217, overlap 1761213 1761220 CTTGTTCGTGACAAC CTTGATGCGG CTTT CCGCGTCTAG TTTGTAGCTTAGCCT TERM 1098 1761728 - 1761746 + g 86 -14.6 -3.30124 | opp_overlap 1761730 1761732 TCCCACATGTTTACA GAGAGGGG AAC CCCCTCTC TTATGAGGGATCCCG Tneu_1999 1762115 - 1761825 - | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein TERM 1099 1761973 - 1761996 + g 74 -3.7 -4.83615 | TGCACATAACATTTC GCCGGGCAC ATATAG GTACACGGC TTTTTCTCGCACCTC Tneu_2000 1763392 - 1762112 - | electron-transferring-flavoprotein dehydrogenase TERM 1100 1762504 - 1762482 - G 70 -4.7 -4.44667 | GTGTGCAACAAGAAA CCTGCGGCG TCGCC CGCCACCAG CAGTCCATCGTAGTA Tneu_2001 1763453 - 1764139 + | MoaD family protein Tneu_2002 1764611 - 1764228 - | hypothetical protein Tneu_2003 1764699 - 1765475 + | putative circadian clock protein, KaiC Tneu_2004 1765547 - 1765963 + | hypothetical protein Tneu_2005 1766003 - 1766224 + | ArsR family transcriptional regulator TERM 1101 1766292 - 1766276 - f 74 -7.3 -4.28656 | AGGTAATATCTAAAA CATAGGT CAT ACCCATG TGGGCACGTGCACTG Tneu_2006 1766292 - 1766492 + | hypothetical protein Tneu_2007 1766555 - 1767229 + | ribosomal protein S7 Tneu_2008 1767259 - 1768245 + | replication factor C TERM 1102 1768273 - 1768283 + G 71 -8.2 -4.10161 | opp_overlap 1768272 GGGTTGAAAAATACC GGCC AAA GGCC TTTTCGGAAATCGTA Tneu_2009 1768245 - 1769513 + | ATPase central domain-containing protein Tneu_2010 1769527 - 1769823 + | hypothetical protein