TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.692355 %AT, 1738929 nt, 9195 terms. Intergenic: 0.688986 %AT, H2T: 234704 nt, 1241 terms; T2T: 59326 nt, 1100 terms; H2H: 62032 nt, 894 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|217076133|ref|NC_011653.1| Thermosipho africanus TCF52B, complete genome (length 2016657) THA_1 2126 - 1674 - | hypothetical protein THA_2 4057 - 2126 - | DNA double-strand break repair protein Rad50, putative TERM 1 2611 - 2632 + g 81 -4.5 -5.42198 | TAGTATTAAGTATTA TTTGTTGTA AATT TTCAACAAA TTTTATTTTTTCAAA THA_3 4266 - 4063 - | hypothetical protein THA_4 6377 - 4284 - | type III restriction enzyme, res subunit THA_5 6911 - 6798 - | hypothetical protein THA_6 9433 - 6926 - | helicase TERM 2 8416 - 8427 + g 74 -3 -5.47159 | GCTCCTTATGTGGTT CAAA ACTT TTTG TTTTTATTTCTTCAA TERM 3 8810 - 8821 + g 83 -3 -5.75599 | TCTATATTTTTCTAA GATT AATA AATC TTTTTTTGTGCTTTC THA_7 11232 - 9430 - | hypothetical protein TERM 4 10100 - 10116 + g 75 -4.5 -5.15634 | overlap 10092 AAATCATTTACGTTT TTGATGT AAT ATATCAA TTTTTTAATAGGATC TERM 5 11095 - 11115 + g 95 -8.5 -5.39721 | opp_overlap 11095 11093 11092 ATAAAACCAAAAGTA TTTATAACT CTT AGTTATAAA TTTTTTATCTAGTAA TERM 6 11115 - 11095 - G 72 -8.5 -3.26499 | opp_overlap 11095, overlap 11093 11092 ATAAAACCAAAAGTA TTTATAACT CTT AGTTATAAA TTTTTTATCTAGTAA THA_8 11317 - 12558 + | viral A-type inclusion protein repeat, putative THA_9 12551 - 13204 + | chemotaxis protein MotB, putative THA_10 13290 - 13682 + | hypothetical protein THA_11 14688 - 13897 - | hypothetical protein TERM 7 14212 - 14229 + g 75 -7.1 -4.1721 | ACCGAATTCATTCAT CATCTTA ATAA TAAGATG TTTTGGCATATCAAT THA_12 14838 - 14701 - | hypothetical protein THA_13 15700 - 14966 - | hypothetical protein TERM 8 15288 - 15301 + g 70 -5.3 -4.63218 | opp_overlap 15288 15286 AAAAATACTAAAATA TTTGG AATA CCAAA TTTTATTAAAAAGGA THA_14 16606 - 15785 - | integrase, catalytic region TERM 9 16450 - 16460 + g 72 -6.8 -4.11472 | overlap 16449 AGATGCGTCTATATC CCCA ATA TGGG TGTTTTTGCTTTAGC THA_15 17333 - 16947 - | hypothetical protein TERM 10 17175 - 17161 - G 71 -8.6 -2.81969 | overlap 17158 TCAATAAGTGAATTA GGATGA TCT TCATCC CAGAAAACTACAGTA TERM 11 17412 - 17393 - R 100 -6.4 -5.73563 | opp_overlap 17393 17392 17406, overlap 17395 ATTAAATTAAAAAAA TACCTCCT AATT AGGAGGAA GATTTCTTTTTCCTT TERM 12 17410 - 17395 - R 89 -9 -4.49088 | opp_overlap 17393 17392 17406, overlap 17393 TAAATTAAAAAAATA CCTCCT AATT AGGAGG AAGATTTCTTTTTCC THA_16 17576 - 17403 - | hypothetical protein THA_17 17888 - 18442 + | hypothetical protein TERM 13 18465 - 18494 + T 100 -13.7 -3.16144 | opp_overlap 18470, overlap 18470 TCCCCTCTTTAACTA AAAAACCTCGCCA AAAA TGGCGAGGTTTTA CTTTGTTAATAATCT TERM 14 18470 - 18489 + T 100 -13.6 -4.68846 | opp_overlap 18470, overlap 18465 TCTTTAACTAAAAAA CCTCGCCA AAAA TGGCGAGG TTTTACTTTGTTAAT TERM 15 18489 - 18470 - T 100 -13.6 -5.26875 | opp_overlap 18470 18465 TCTTTAACTAAAAAA CCTCGCCA AAAA TGGCGAGG TTTTACTTTGTTAAT THA_18 19381 - 18518 - | UAA transporter family THA_19 19539 - 20468 + | hypothetical protein THA_20 21200 - 20463 - | hypothetical protein TERM 16 21348 - 21369 + r 77 -4.3 -5.29445 | opp_overlap 21350, overlap 21349 21350 TTTATAAAAACAAAA AAGCCAAGC GATT GCTTGGCAG TTTTTCTTGTTGACA TERM 17 21349 - 21368 + r 74 -7.8 -3.76582 | opp_overlap 21350, overlap 21348 21350 TTATAAAAACAAAAA AGCCAAGC GATT GCTTGGCA GTTTTTCTTGTTGAC TERM 18 21367 - 21350 - R 100 -11.3 -5.98675 | opp_overlap 21349 21348 21350 TATAAAAACAAAAAA GCCAAGC GATT GCTTGGC AGTTTTTCTTGTTGA TERM 19 21350 - 21367 + r 86 -11.3 -2.84865 | opp_overlap 21350, overlap 21349 21348 TATAAAAACAAAAAA GCCAAGC GATT GCTTGGC AGTTTTTCTTGTTGA THA_21 21847 - 21392 - | hypothetical protein TERM 20 21514 - 21498 - G 77 -8.1 -3.79747 | opp_overlap 21498, overlap 21508 TCATCCAGTACTAAA TCATCAA ATA TTGATGA TTCCTCTAAATCAAC TERM 21 21498 - 21514 + g 72 -8.1 -3.2794 | opp_overlap 21498 21508 TCATCCAGTACTAAA TCATCAA ATA TTGATGA TTCCTCTAAATCAAC TERM 22 21606 - 21622 + g 75 -9.5 -2.99837 | overlap 21605 TTCTTATTTTTTCTG GCAATTG GTA CAATTGC ATTTAATCTTTGCAA TERM 23 21869 - 21894 + r 100 -12.1 -5.52909 | opp_overlap 21874 21876 ACTCCTTCTTTACCA TGCAATATAAG TTAC CTTATATTGCA TTTTTTTGAATATTC THA_22 23617 - 21908 - | penicillin-binding protein 2 TERM 24 23506 - 23523 + g 70 -3.5 -5.15634 | gap 1 TACAACCATAAATTT TACCTCTC AAT GA-AGGTA TTTTTTCATAAACTA THA_23 23918 - 23646 - | hypothetical protein TERM 25 23852 - 23841 - G 71 -3 -5.31877 | opp_overlap 23841 AGCTACTAGAAAAAA CTTT TTTA AAAG TTCTAATACGGATAA mraW 24808 - 23933 - | S-adenosyl-methyltransferase MraW TERM 26 24203 - 24213 + g 78 -3.2 -5.54338 | overlap 24197 TTGGAAAGTTTTTGT GGCA AAA TGTC TTTTTCTTTTCCTTA TERM 27 24388 - 24402 + g 85 -2.8 -5.84432 | opp_overlap 24388 CAGAATAAAAATTTA CAACAT CAT ATGCTG TTTTTTTCTGTTCTA TERM 28 24471 - 24485 + g 70 -8.6 -2.58714 | opp_overlap 24464, overlap 24468 GTAAAACCTCTACCT TCAGCT TTC AGCTGA TAAGTTGATATACCA THA_25 26338 - 24980 - | hydroxydechloroatrazine ethylaminohydrolase TERM 29 25841 - 25856 + g 84 -6.8 -5.31275 | overlap 25842 TTGAACAACACTATC TGGAGG AAGA CCTCCG TTTTTTCTACTAAGC TERM 30 25842 - 25855 + g 77 -8.1 -3.78042 | overlap 25841 TGAACAACACTATCT GGAGG AAGA CCTCC GTTTTTTCTACTAAG THA_26 27767 - 26349 - | pyridoxal-5'-phosphate-dependent enzyme, beta subunit THA_27 30046 - 27764 - | aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding TERM 31 28819 - 28830 + g 83 -3 -5.75342 | opp_overlap 28819 TTGATGCCTTATAAA CTTT TTCT AAAG TTTTTTTTGCCCCAA THA_28 31774 - 30050 - | ade adenine deaminase TERM 32 30185 - 30197 + g 74 -2 -5.52347 | opp_overlap 30185 ACTATTTACACCAAT TTCT ACTAA AGAA TTTTTTAATTTTCTT TERM 33 31835 - 31814 - R 100 -8.8 -5.74122 | opp_overlap 31814 GATTATATAAAAAAA TCACCCTT ATAAAA AAGGGTGA TTTTTTATCTTATTT TERM 34 31814 - 31835 + r 100 -8.8 -5.57729 | opp_overlap 31814 GATTATATAAAAAAA TCACCCTT ATAAAA AAGGGTGA TTTTTTATCTTATTT THA_29 33054 - 31888 - | flagellin TERM 35 32817 - 32799 - G 70 -9 -2.71364 | opp_overlap 32793, overlap 32804 TCATTCTCTGAAGGA TTGAATGA ACT TCATTCAA TGCACCTTCTGCTGT TERM 36 33109 - 33158 + r 100 -7.4 -5.77677 | gap 1, opp_overlap 33103 33100 33120, overlap 33120 TATTAATTATTTTTT TCCTAAAAAAATAGCATCTCACC TTACT GGTGAGATGCTATTTTAA-AGAA TTTTTTATTATTTTA TERM 37 33148 - 33120 - R 100 -16.2 -5.40072 | opp_overlap 33109 33120, overlap 33100 TTTTTCCTAAAAAAA TAGCATCTCACC TTACT GGTGAGATGCTA TTTTAAAGAATTTTT TERM 38 33120 - 33148 + r 100 -16.2 -4.14615 | opp_overlap 33100 33120, overlap 33109 TTTTTCCTAAAAAAA TAGCATCTCACC TTACT GGTGAGATGCTA TTTTAAAGAATTTTT THA_30 34308 - 33166 - | oligopeptide ABC transporter, ATP-binding protein TERM 39 33286 - 33298 + g 74 -7.7 -3.76492 | opp_overlap 33284, overlap 33271 33270 TGGATGGAATCTACA TCCAC TTG GTGGA TTTACTGGACTTGGA THA_31 35321 - 34305 - | oligopeptide ABC transporter, ATP-binding protein TERM 40 34484 - 34498 + g 70 -8.6 -2.50817 | opp_overlap 34483, overlap 34483 34481 34479 GAAAATGTAATGGAT CAGGAA CAA TTCCTG GTATATTATAGAGTT TERM 41 35220 - 35202 - G 76 -9.6 -2.84134 | overlap 35201 AGATTCACCAACAAT TCCAAGTG TCT CACCTGGA TAAACTTCAAAGTCC THA_32 36250 - 35336 - | oligopeptide transport system permease protein AppC TERM 42 35464 - 35445 - G 74 -7.9 -3.77588 | overlap 35449 ACGGTATACCAATAA GCTAGTG CTTGAC CACTAGC ACCTAATATATAGTT THA_33 37302 - 36265 - | oligopeptide transport system permease protein AppB TERM 43 36816 - 36791 - G 84 -9.1 -3.71527 | gap 1, overlap 36805 GCCCAATCACTCAAA GTTCCTGG-TGG AAA CCATCCAAGAAC TGAATAGAAAATCAT uvrC 39077 - 37422 - | excinuclease ABC, C subunit TERM 44 38376 - 38388 + g 72 -7.7 -3.68853 | opp_overlap 38375 38376 TTTATCATTTAAAAT CACAC CTT GTGTG TTTAACAGTTTTTCA TERM 45 39117 - 39099 - R 100 -11 -5.36441 | opp_overlap 39099 CCTCCATACAAAAAA TGTGGGGA CTT CCCCCACA TTTTTTATGAGCTAA TERM 46 39099 - 39117 + r 100 -10.3 -5.26316 | opp_overlap 39099 CCTCCATACAAAAAA TGTGGGG ACTTC CCCCACA TTTTTTATGAGCTAA THA_35 39580 - 39140 - | hypothetical protein gcvH 39948 - 39580 - | glycine cleavage system H protein THA_37 40147 - 40419 + | thioredoxin TERM 47 40452 - 40414 - T 78 -6.9 -4.42287 | gap 1, opp_overlap 40410 40416 40420, overlap 40417 40420 GAAATAAGTAATAAA GAATA-AGGCTAATAGGG AAAT CCCTATTAGCCTATAATT AATTTTCCTAAATTT TERM 48 40416 - 40450 + T 82 -9.5 -3.72073 | gap 1, opp_overlap 40414 40417 40420, overlap 40410 40420 AATAAGTAATAAAGA ATA-AGGCTAATAGGG AAAT CCCTATTAGCCTATAA TTAATTTTCCTAAAT TERM 49 40449 - 40417 - T 100 -13 -4.28597 | gap 1, opp_overlap 40416 40410 40420, overlap 40414 40420 ATAAGTAATAAAGAA TA-AGGCTAATAGGG AAAT CCCTATTAGCCTATA ATTAATTTTCCTAAA TERM 50 40445 - 40420 - T 100 -16.3 -4.22676 | opp_overlap 40416 40410 40420, overlap 40417 40414 AGTAATAAAGAATAA GGCTAATAGGG AAAT CCCTATTAGCC TATAATTAATTTTCC TERM 51 40420 - 40445 + T 100 -16.3 -3.01783 | opp_overlap 40420 40417 40414, overlap 40416 40410 AGTAATAAAGAATAA GGCTAATAGGG AAAT CCCTATTAGCC TATAATTAATTTTCC feoB 42386 - 40440 - | ferrous iron transport protein B THA_39 42816 - 42388 - | iron (II) transport protein A THA_40 42928 - 43314 + | hypothetical protein THA_41 43878 - 43303 - | hypothetical protein THA_42 44653 - 43865 - | hypothetical protein THA_43 48609 - 44653 - | bacterial type II and III secretion system protein TERM 52 46537 - 46549 + g 71 -4.9 -4.68908 | opp_overlap 46537 CTGGCTCCCTAAAAG CAATA CAT TATTG TTTATTTTAAATACC THA_44 49063 - 48599 - | hypothetical protein THA_45 49490 - 49050 - | hypothetical protein THA_46 50044 - 49487 - | acriflavine resistance protein, putative THA_47 50957 - 50016 - | hypothetical protein TERM 53 50549 - 50533 - GR 72 -5.9 -4.39696 | overlap 50529 TTTGAAAGCAATAAA GATTCCT TAA AGAAATC AGGATAAACAATATC THA_48 51328 - 50972 - | hypothetical protein THA_49 52526 - 51330 - | type II secretion system protein TERM 54 51785 - 51799 + g 78 -4.3 -5.41746 | GTGGAAATAATCTTC CGAAA AATTC TTTCG TTTTTTTACCCGGTT THA_50 53205 - 52543 - | cobalt import ATP-binding protein CbiO 2 TERM 55 52955 - 52930 - G 76 -2.5 -5.61596 | overlap 52931 AGTCTCAGAAAAAAA CTGCTTTTCTG GAAA CTGAAAGGCAA AACCTATTTTTTTCC THA_51 53798 - 53202 - | ribosomal RNA small subunit methyltransferase C THA_52 54254 - 53799 - | actinorhodin polyketide dimerase-related protein TERM 56 54492 - 54505 + G 70 -5.3 -4.60487 | TTTAGTTAGTTTATA CTCTT TTGC AAGAG TTTTTCCAAATGATC TERM 57 55303 - 55289 - g 78 -4.3 -5.4251 | opp_overlap 55298, overlap 55296 55298 CTTATACAGAAAAAA CTGAT AATAG ATCAG CATTGGGAAGAGCTA TERM 58 55809 - 55792 - g 76 -2.7 -5.626 | opp_overlap 55792 GAGCCTATAAAAAAA GAAGATG GAAG CATATTC TTTGATGAAAATTAC THA_53 54367 - 56229 + | transketolase TERM 59 56259 - 56230 - T 100 -13.7 -3.43604 | opp_overlap 56236 56257, overlap 56216 56236 ATATTAGAAGACTAA TAAAAAGCCTGGC ATCA GCCAGGCTTTTTT AAATAGTTAAAGCTT TERM 60 56253 - 56236 - T 100 -12.7 -5.19251 | opp_overlap 56236, overlap 56230 GAAGACTAATAAAAA GCCTGGC ATCA GCCAGGC TTTTTTAAATAGTTA TERM 61 56236 - 56253 + T 100 -12.7 -5.12617 | opp_overlap 56236 56230 GAAGACTAATAAAAA GCCTGGC ATCA GCCAGGC TTTTTTAAATAGTTA THA_54 57030 - 56266 - | hypothetical protein lpdA 57186 - 58529 + | dihydrolipoyl dehydrogenase THA_56 58546 - 59163 + | N-glycosylase/DNA lyase THA_57 59166 - 59951 + | hypothetical protein TERM 62 59996 - 60023 + T 93 -8.4 -5.1361 | opp_overlap 59997, overlap 59997 AAATATCACTACAAA ACCCCATCCAAT ATAA ATAGGATGGGGC TTTTTTAGAATTTCT TERM 63 59997 - 60022 + T 95 -11.9 -3.6654 | opp_overlap 59997, overlap 59996 AATATCACTACAAAA CCCCATCCAAT ATAA ATAGGATGGGG CTTTTTTAGAATTTC TERM 64 60022 - 59997 - T 100 -11.9 -4.50583 | opp_overlap 59997 59996 AATATCACTACAAAA CCCCATCCAAT ATAA ATAGGATGGGG CTTTTTTAGAATTTC lepB 60944 - 60072 - | signal peptidase I rplS 61298 - 60951 - | ribosomal protein L19 THA_60 61884 - 61318 - | tRNA (guanine-N(1)-)-methyltransferase trmD 62614 - 61874 - | tRNA (guanine-N1)-methyltransferase TERM 65 62131 - 62103 - G 72 -6.1 -4.21974 | overlap 62099 62104 GGATGATCTAATAAA CCAGTATTAAAAG ACT CTTCTATTACTGA TTCATCAGAAATTAC TERM 66 62439 - 62414 - G 71 -6.9 -3.92659 | overlap 62417 GTCGTAAAACCTAAA GAATGGCTCTG GCTT CATAACCATTC CTGGACCGCCGCCAA rimM 63147 - 62611 - | 16S rRNA processing protein RimM TERM 67 63024 - 63012 - G 72 -2.7 -5.40464 | overlap 63006 63014 CATTATAAAGAAAAA TCTCT TCC AAAGA CTCAATAATTTCTGG THA_63 63368 - 63144 - | hypothetical protein TERM 68 63336 - 63359 + g 74 -6.7 -4.22442 | opp_overlap 63315 63336 63335 GGGATTTTTTACAAT CCCCTTGAG CATATA CTCAAGGAG TTCTTTCATTTATTT TERM 69 63359 - 63336 - G 76 -9.6 -2.57931 | opp_overlap 63336, overlap 63315 63335 GGGATTTTTTACAAT CCCCTTGAGC ATAT ACTCAAGGAG TTCTTTCATTTATTT rpsP 63649 - 63365 - | ribosomal protein S16 THA_65 64980 - 63673 - | ffh signal recognition particle protein TERM 70 65009 - 65019 + H 74 -4 -5.2189 | CCTTCACCTTCATTA GTAT ATA ATAC TTTTTTACTAATTCA TERM 71 65304 - 65325 + H 100 -5.8 -6.06723 | opp_overlap 65305, overlap 65305 GGGATGGGATGCAAA ATCCCTCC GATCAA GGAGGGAA TTTTTTTTTAAAAGG TERM 72 65324 - 65305 - H 88 -9.3 -4.1899 | opp_overlap 65305 65304 GGATGGGATGCAAAA TCCCTCC GATCAA GGAGGGA ATTTTTTTTTAAAAG TERM 73 65305 - 65324 + H 88 -9.3 -4.22949 | opp_overlap 65305, overlap 65304 GGATGGGATGCAAAA TCCCTCC GATCAA GGAGGGA ATTTTTTTTTAAAAG THA_66 65350 - 66327 + | ABC-type thiamine transport system, periplasmic component TERM 74 66340 - 66370 + TF 100 -6.3 -5.72622 | gap 1, opp_overlap 66346, overlap 66346 TAATTCCAATTACGT TTATAATGGGAGGA GTTA TCCTCCCATT-TAC TTTTTTATTTATAAA TERM 75 66346 - 66365 + TF 100 -12.2 -4.53334 | opp_overlap 66346, overlap 66340 CAATTACGTTTATAA TGGGAGGA GTTA TCCTCCCA TTTACTTTTTTATTT TERM 76 66365 - 66346 - Tf 90 -12.2 -3.32268 | opp_overlap 66340 66346 CAATTACGTTTATAA TGGGAGGA GTTA TCCTCCCA TTTACTTTTTTATTT THA_67 66598 - 66446 - | hypothetical protein THA_68 66591 - 67847 + | ABC transporter, permease protein THA_69 68704 - 67844 - | integral membrane protein TERM 77 68735 - 68768 + r 74 -6.7 -4.19324 | opp_overlap 68740, overlap 68734 68737 68740 TATTTATTTTAGCAT AAAAATTGCCGAGCT AAAT AGCTCGGCAATGATA TTATTTATATACTTT TERM 78 68737 - 68766 + r 80 -9.3 -3.67344 | opp_overlap 68740, overlap 68735 68734 68740 TTTATTTTAGCATAA AAATTGCCGAGCT AAAT AGCTCGGCAATGA TATTATTTATATACT TERM 79 68740 - 68763 + r 100 -15.4 -2.93099 | opp_overlap 68740, overlap 68737 68735 68734 ATTTTAGCATAAAAA TTGCCGAGCT AAAT AGCTCGGCAA TGATATTATTTATAT TERM 80 68763 - 68740 - R 100 -15.4 -4.91511 | opp_overlap 68740 68737 68735 68734 ATTTTAGCATAAAAA TTGCCGAGCT AAAT AGCTCGGCAA TGATATTATTTATAT THA_70 71268 - 68773 - | glycogen phosphorylase, muscle form TERM 81 69639 - 69667 + g 71 -3.3 -5.22258 | TATTCAATTCTTTCT TAATATAATTTGA TAA TCTAATTTTATTA TTTTGTTTTACTTTA TERM 82 70832 - 70806 - G 81 -10.3 -3.14026 | opp_overlap 70813 CATATTCATATCTAA TACCATATCCG TATCC CGGATATGATA AAGTAGCAATTGAAT TERM 83 71396 - 71411 + r 95 -10.4 -4.15788 | opp_overlap 71396 AATAAAACAAAAAAA CCGGCT AAAA AGCCGG TTTATTAAAAAAATT TERM 84 71411 - 71396 - R 100 -10.4 -6.17669 | opp_overlap 71396 AATAAAACAAAAAAA CCGGCT AAAA AGCCGG TTTATTAAAAAAATT THA_71 72786 - 71425 - | serine protease MucD THA_72 72953 - 74017 + | tetratricopeptide repeat domain protein TERM 85 74070 - 74108 + G 100 -9.6 -4.65838 | opp_overlap 74072, overlap 74072 TGTAATTATTTATAG AAGCGTGGAGGGTATTAA AAT TTATGATCCTCCACGCTC TTTTTGCCCTATGTG TERM 86 74106 - 74072 - g 81 -10 -3.5361 | opp_overlap 74070 74072 TAATTATTTATAGAA GCGTGGAGGGTATTAA AAT TTATGATCCTCCACGC TCTTTTTGCCCTATG TERM 87 74072 - 74106 + G 100 -12.2 -3.93817 | opp_overlap 74072, overlap 74070 TAATTATTTATAGAA GCGTGGAGGGTATTAA AAT TTATGATCCTCCACGC TCTTTTTGCCCTATG THA_73 74002 - 74700 + | pilin secretion/fimbrial assembly signal peptidase, PilD THA_74 74711 - 75190 + | transglycosylase THA_75 75171 - 76679 + | carbohydrate kinase family protein THA_76 76676 - 77803 + | tetratricopeptide repeat domain protein TERM 88 77862 - 77845 - g 71 -7.1 -3.73534 | CAATTTCATGAAGAA TTTCCAT TACA ATGGAAA AAAATATTTGATAAT TERM 89 78358 - 78346 - g 95 -6.3 -5.86061 | CGTTATGAAAAAAAA TGGAT AAA ATCCA ATAGAGATATATTCA THA_77 77800 - 78729 + | tRNA (guanine-N(7)-)-methyltransferase (tRNA(m7G46)-methyltransferase) THA_78 78726 - 79694 + | glycerol-3-phosphate dehydrogenase [NAD(P)+] (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase) (NAD(P)H-dependentdihydroxyacetone-phosphate reductase) THA_79 79682 - 80026 + | hypothetical protein THA_80 80031 - 80270 + | hypothetical protein THA_81 80267 - 80524 + | hypothetical protein TERM 90 81063 - 81047 - g 88 -3.1 -6.07969 | CAAAAGTAAAAAAAA TAAAAAA CGC TTCTTTA TATTTTAAATTCTCT TERM 91 81099 - 81114 + G 76 -6.2 -4.5442 | AGATACAACACTTTT TGAAGA ATTT TCTTCA TTTTATAATTCCCAA THA_82 80521 - 81174 + | hypothetical protein TERM 92 81331 - 81318 - g 79 -5.3 -5.1963 | CCTAACTAACAAAAA CAACT TATT AGTTG ACCTTGGACATGGTG THA_83 81175 - 82206 + | endoglucanase, aminopeptidase M42 family TERM 93 82572 - 82558 - g 77 -5.7 -4.90455 | ATAGACCCAGAAAAA GCATG GGATT CATGC TTAAAAATTTATTTT THA_84 82261 - 82746 + | manganese-dependent transcription regulator THA_85 82748 - 82984 + | hypothetical protein THA_86 82985 - 83836 + | metallophosphoesterase, putative THA_87 83823 - 84341 + | acetyltransferase, gnat family THA_88 84338 - 85075 + | Ymf77, putative THA_89 85078 - 85836 + | hypothetical protein THA_90 85833 - 86351 + | ATP:cob(I)alamin adenosyltransferase hutH 86370 - 87854 + | histidine ammonia-lyase TERM 94 87956 - 87983 + G 70 -5.6 -4.29176 | opp_overlap 87959 TTTAAAAATGTCTCA CAAGGTGCTCAA AAAA TTAATCACCTTG TTTTAACTTCCATCT THA_92 87851 - 89848 + | methyl-accepting chemotaxis protein 4 TERM 95 89877 - 89907 + T 100 -7.6 -5.71295 | ATTATTGCATTTATA CCCCCTGATTAG TATTAAT TTATTCAGGGGG TTTTTGTTTTTATAT TERM 96 89967 - 89947 - T 88 -8.5 -4.41348 | opp_overlap 89949 CTTCTTCTAAATAAA GTTAAATAA AAT TTATTTAAC ATAGCATAAATTAAA TERM 97 90077 - 90038 - T 100 -13.2 -2.85699 | gap 1, opp_overlap 90038 90044 90065, overlap 90044 ATTCATTTATTAAAT TAAAAACTCCACCC-CTAA ACT TTAATGGGTGGAGTTTTCA TCTTTTAAAATCTAA TERM 98 90038 - 90077 + T 82 -9.4 -3.68378 | opp_overlap 90038 90044, overlap 90044 90065 ATTCATTTATTAAAT TAAAAACTCCACCCCTAA ACTT TAATGGGTGGAGTTTTCA TCTTTTAAAATCTAA TERM 99 90071 - 90044 - T 100 -10 -5.01811 | gap 1, opp_overlap 90038 90044 90065, overlap 90038 TTATTAAATTAAAAA CTCCACCC-CTAA ACT TTAATGGGTGGAG TTTTCATCTTTTAAA TERM 100 90044 - 90071 + T 85 -8.4 -4.55826 | opp_overlap 90044 90038, overlap 90038 90065 TTATTAAATTAAAAA CTCCACCCCTAA ACTT TAATGGGTGGAG TTTTCATCTTTTAAA THA_93 91197 - 90100 - | outer membrane protein THA_94 92258 - 91221 - | chemotaxis response regulator protein-glutamate methylesterase TERM 101 91641 - 91655 + g 79 -7.2 -4.36914 | AGAAATTTTGTTTAA TCTTTG AGC CAAAGA TTTTGTAAAACCAGC THA_95 92719 - 92240 - | probable diacylglycerol kinase THA_96 93284 - 92682 - | keto/oxoacid ferredoxin oxidoreductase, gamma subunit, putative THA_97 94112 - 93288 - | 2-oxoglutarate synthase subunit KorB THA_98 94611 - 94099 - | deoxycytidylate deaminase ahcY 94796 - 95998 + | adenosylhomocysteinase THA_100 96003 - 97400 + | cytoplasmic axial filament protein TERM 102 97777 - 97767 - g 70 -5.4 -4.59954 | AATAATAAAAAAATA CTCT CTG AGAG CGAAATTAAAAAAGT TERM 103 99072 - 99037 - g 76 -9.2 -3.136 | opp_overlap 99047, overlap 99046 CTAATATTGAAGATA TTCCAAGAACTTCTCT TATA AGAGAATTTATTGGAA GGAGTGTGTTTAAAT TERM 104 99047 - 99062 + G 70 -6.2 -4.15222 | opp_overlap 99046 99037 AGATATTCCAAGAAC TTCTCT TATA AGAGAA TTTATTGGAAGGAGT THA_101 97416 - 99092 + | udk phosphoribulokinase family protein TERM 105 99876 - 99866 - g 72 -2.6 -5.40072 | CTTGTTTCAAAAAAA TTTA ATT TAAA ACTCTTTTATGTCCC THA_102 99089 - 99991 + | hypothetical protein THA_103 99988 - 100446 + | hypothetical protein THA_104 100451 - 100705 + | hfq RNA chaperone Hfq hflX 100758 - 101768 + | GTP-binding proten HflX THA_106 101769 - 102734 + | M23 peptidase domain protein THA_107 102737 - 103057 + | hypothetical protein metK 103054 - 104241 + | methionine adenosyltransferase rpsT 104263 - 104541 + | ribosomal protein S20 THA_110 104557 - 104964 + | hypothetical protein TERM 106 105012 - 104967 - T 91 -8 -5.00467 | gap 2, opp_overlap 104976, overlap 104972 104976 TGAAGAAGAATAAAA TTAAATTAACATGGCTTTGAGT TAAA ACTCAAAGCCATGTT--TTTAT TTTACAAAACTTGAT TERM 107 105009 - 104972 - T 100 -12.9 -4.36716 | opp_overlap 104976, overlap 104967 104976 AAGAATAAAATTAAA TTAACATGGCTTTGAGT TAAA ACTCAAAGCCATGTTTT TATTTTACAAAACTT TERM 108 104976 - 105005 + T 100 -18.1 -5.45802 | opp_overlap 104972 104967 104976 ATAAAATTAAATTAA CATGGCTTTGAGT TAAA ACTCAAAGCCATG TTTTTATTTTACAAA TERM 109 105005 - 104976 - T 100 -18.1 -3.69699 | opp_overlap 104976, overlap 104972 104967 ATAAAATTAAATTAA CATGGCTTTGAGT TAAA ACTCAAAGCCATG TTTTTATTTTACAAA THA_111 105554 - 105009 - | hypothetical protein TERM 110 106117 - 106107 - g 72 -6.8 -4.11472 | overlap 106105 GCTAAAGCAAAAACA CCCA TAT TGGG GATATAGACGCATCT THA_112 105961 - 106782 + | integrase, catalytic region, putative TERM 111 107335 - 107285 - g 72 -4.2 -5.05228 | opp_overlap 107291 107292 107295 107304, overlap 107292 107304 107317 ACGAAATTACAAAAA TTGAAGATCCTTCCAAAAATCTTT TTG AAAGATTTTTGGAATCAATTTCTA AAAAAACTGGTAAAA TERM 112 107328 - 107292 - g 80 -9.7 -3.30767 | opp_overlap 107291 107292 107295 107304, overlap 107285 107304 107317 TACAAAAATTGAAGA TCCTTCCAAAAATCTTT TTG AAAGATTTTTGGAATCA ATTTCTAAAAAAACT TERM 113 107292 - 107328 + G 77 -9.7 -2.91395 | opp_overlap 107292 107285 107304 107317, overlap 107291 107295 107304 TACAAAAATTGAAGA TCCTTCCAAAAATCTTT TTG AAAGATTTTTGGAATCA ATTTCTAAAAAAACT TERM 114 107295 - 107325 + G 100 -15.8 -2.70354 | opp_overlap 107292 107285 107304 107317, overlap 107292 107291 107304 AAAAATTGAAGATCC TTCCAAAAATCTTT TTG AAAGATTTTTGGAA TCAATTTCTAAAAAA TERM 115 107541 - 107519 - g 81 -2.8 -5.75342 | TTGCTGTAAAAAAAA GAATAGATTT TGC AAATTTATCC CCCGAAAACTTTTTC THA_113 107131 - 107772 + | hypothetical protein TERM 116 108061 - 108047 - g 82 -8.6 -3.96827 | AAAACTATGGACAAA GAGAGT TTT ACTCTC AAAAAGCTTTACAAT TERM 117 108247 - 108231 - g 70 -3.7 -5.12916 | overlap 108223 108234 108245 GATAAAACAATAAAA GTATTGT ACT ACAATTC AAATATGAAAAAGTC TERM 118 108322 - 108297 - g 75 -4.9 -5.13521 | gap 1, opp_overlap 108300 108302, overlap 108300 AAACGATTCAAAAAA GATGACTATAAA ATA CTTATAGTC-TC TACTCAATTTATTTC TERM 119 108372 - 108362 - g 78 -4 -5.39221 | opp_overlap 108362 108362 AGAAGAATTAAAAAA CAAA TTC TTTG ATTTTGTATTTATTG THA_114 107787 - 110882 + | rgy reverse gyrase TERM 120 111106 - 111082 - g 70 -5.1 -4.57474 | overlap 111075 111061 CCAAGTTAGACAAAA TATGTCCCA ATTTGGA TGGAACATA AAACCATTCGAAGAA TERM 121 111291 - 111269 - g 74 -7.8 -3.72407 | opp_overlap 111268 111269 ATAAACGCTAAAAGA GTTGTTATAG ATT CTGTAACAAC ATTATATTTAAACAA TERM 122 111269 - 111291 + G 76 -10 -2.88571 | opp_overlap 111269, overlap 111268 ATAAACGCTAAAAGA GTTGTTATAG ATT CTGTAACAAC ATTATATTTAAACAA THA_115 110879 - 111583 + | ATPase, RecA superfamily THA_116 111598 - 112032 + | hypothetical protein THA_117 112160 - 113275 + | transcriptional regulator, XylR-related THA_118 114212 - 113262 - | sensor histidine kinase, PhoR-related THA_119 114873 - 114205 - | phosphate regulon transcriptional regulatory protein PhoB TERM 123 114371 - 114354 - G 70 -5.7 -4.20106 | AAACTGTATCTAAAA TTTTTTC CCTT GAAAAAA CATAATCTGGATTTT phoU 115519 - 114851 - | phosphate transport system regulatory protein PhoU pstB 116286 - 115534 - | phosphate ABC transporter, ATP-binding protein pstA 117094 - 116273 - | phosphate ABC transporter, permease protein PstA THA_123 117947 - 117087 - | phosphate ABC transporter, permease protein TERM 124 117899 - 117878 - G 86 -7.3 -5.1244 | CTATCAAGAGAAAAA GCGCTGT GATGGACA ACAGCGC AAAAAAGTATATTAA THA_124 118780 - 117959 - | phosphate ABC transporter, periplasmic phosphate-binding protein THA_125 120400 - 119063 - | fatty aldehyde dehydrogenase TERM 125 120162 - 120178 + g 74 -2.3 -5.57054 | overlap 120171 ATACCAACTTTTACT CTTTTAG GCT TTGAAAG TTTTTTTAAATTCTT THA_126 120926 - 120435 - | acetyltransferase, gnat family THA_127 121102 - 121530 + | transcriptional regulator, putative, Mar family TERM 126 121622 - 121591 - g 73 -5.9 -4.66264 | opp_overlap 121599, overlap 121611 GAAAACTTTTAAAAA TGGGGGAACAAGT TGTAAC ACTTGTTCATCCA AGTGACAAATGTGAA TERM 127 121855 - 121842 - g 85 -3.9 -5.67283 | AAGTTAAATAAAAAA CTAAT TTAT ATTAG CTCAGTTCACGCATT THA_128 121527 - 122543 + | putative dihydroflavonol 4-reductase pfkB 123431 - 122508 - | 1-phosphofructokinase TERM 128 123508 - 123485 - R 100 -9.6 -6.28401 | opp_overlap 123485 TAAAAAATAAAAAAA GGTGCCTG GCATTTTA CAGGCACC TTTTCAATATATAAA TERM 129 123485 - 123508 + r 90 -9.6 -4.26188 | opp_overlap 123485 TAAAAAATAAAAAAA GGTGCCTG GCATTTTA CAGGCACC TTTTCAATATATAAA fabG 124271 - 123528 - | 3-oxoacyl-(acyl-carrier-protein) reductase THA_131 125105 - 124362 - | cobalt ABC transporter, permease protein TERM 130 124906 - 124920 + g 77 -7.2 -4.21351 | opp_overlap 124908 CACATATTCTTAACT GATCTA AGA TAGATC TTTATTGAAATCTTT THA_132 127260 - 125119 - | V-type H(+)-translocating pyrophosphatase TERM 131 125746 - 125711 - G 71 -7.7 -3.42699 | overlap 125707 AGAAAATCAAATATA TTTTTCACTGACATC CCTGGT GAAGTCTGTGAAAAA ACATAAGATGCAAAT TERM 132 126350 - 126363 + g 75 -4.5 -5.17054 | TTCAAATCTTTGTGT GGCTT TCCA GAGCC TTTTTTAAATATTAT THA_133 127381 - 127265 - | hypothetical protein TERM 133 127843 - 127825 - g 71 -6 -4.36914 | CTTGCCCGTATAAAA GCAGTCTT CAG AAGAATGC AACTTTCCACTCAAG TERM 134 127955 - 127945 - g 75 -4 -5.22943 | opp_overlap 127945 ATTAAAGGTAAAAAA GTAA ACC TTAC TCCTCTTGAATTCGA TERM 135 128122 - 128105 - g 77 -4.9 -5.20333 | overlap 128110 GACTTAGAACAAAAA TAGAAGA AGAT CCTTCTA ATCCAAAATATATTG THA_134 127471 - 128190 + | DNA-binding response regulator TERM 136 128347 - 128319 - g 85 -11.1 -3.15212 | opp_overlap 128321, overlap 128309 128321 AATTAGCACAGTTAA TAGAGGAGGAAAA AGA TTCTCCTCCTCTT TATATTGCAGAAAAA TERM 137 128321 - 128345 + G 100 -11.5 -4.1891 | opp_overlap 128319 128309 128321 TTAGCACAGTTAATA GAGGAGGAAAA AGA TTCTCCTCCTC TTTATATTGCAGAAA TERM 138 128345 - 128321 - g 100 -13.7 -3.13299 | opp_overlap 128321, overlap 128319 128309 TTAGCACAGTTAATA GAGGAGGAAAA AGA TTCTCCTCCTC TTTATATTGCAGAAA THA_135 128195 - 129469 + | alkaline phosphatase synthesis sensor protein PhoR TERM 139 130163 - 130142 - g 73 -8.1 -3.42768 | opp_overlap 130147, overlap 130147 AGCAAAATCTCATAA CAAAACTGC TGTT GCAGTTTTA ACAAATATGGATGAA TERM 140 130158 - 130147 - g 75 -5.8 -4.78839 | opp_overlap 130147, overlap 130142 AATCTCATAACAAAA CTGC TGTT GCAG TTTTAACAAATATGG THA_136 129456 - 130760 + | pyrimidine-nucleoside phosphorylase THA_137 130770 - 132377 + | hypothetical protein THA_138 132398 - 132910 + | apt adenine phosphoribosyltransferase TERM 141 133956 - 133939 - g 70 -4.3 -4.92239 | TTAAAAACTGAAAAA TTTAATA GAGA TATTAAA ATACCAAATGTTCAT THA_139 132943 - 134292 + | pgi glucose-6-phosphate isomerase THA_140 134292 - 134507 + | hypothetical protein TERM 142 134837 - 134823 - g 70 -4.4 -4.94672 | AAAGAAGATTAAAAA TAAAAT GTG ATTTTA CAATTACAGTAAAAT coaE 134504 - 135043 + | dephospho-CoA kinase TERM 143 135021 - 135061 + T 100 -16.5 -4.54753 | opp_overlap 135030, overlap 135030 AAATCTATACTTTTA TTATGAAAAGTGCCTCTTT TTA AAAGAGGCACTTTTTTTAA TTATTTTTCATCTTT TERM 144 135052 - 135030 - T 100 -15 -4.30576 | opp_overlap 135030 135021 CTTTTATTATGAAAA GTGCCTCTTT TTA AAAGAGGCAC TTTTTTTAATTATTT TERM 145 135030 - 135052 + T 100 -15 -5.73672 | opp_overlap 135030, overlap 135021 CTTTTATTATGAAAA GTGCCTCTTT TTA AAAGAGGCAC TTTTTTTAATTATTT TERM 146 135074 - 135084 + T 72 -2.6 -5.38958 | TAATTATTTTTCATC TTTT TTA AAAA TTTTTGTTTATACAT THA_142 135870 - 135058 - | PleD-related protein uvrB 137906 - 135921 - | excinuclease ABC, B subunit TERM 147 136532 - 136549 + g 82 -4.1 -5.52384 | opp_overlap 136531 TCTCTATTAAATATT CTGCTAA TTTT TCAGCAG TTTTTTTAGTAAGAA THA_144 139563 - 137899 - | fibronectin-binding protein, putative TERM 148 139623 - 139603 - R 100 -16.9 -6.00086 | opp_overlap 139599 ATATCATAAAAAAAA TGCGGCCCA TAA TGGGCCGCA AGAAATTAATTACTT THA_145 141488 - 139644 - | extracellular solute-binding protein, family 5 TERM 149 139822 - 139844 + g 74 -7.6 -3.75598 | AACTCCGCCCTTTTT GCTGCATCTG TTT CAGCTGCTGC TTGTTCAATTAATTC TERM 150 140991 - 141003 + g 77 -7.7 -4.09805 | AAATACTTCTTCTGC TCCAG GTA CTGGA TTTCCTTCTTCATCA THA_146 142689 - 141601 - | hypothetical protein TERM 151 141957 - 141967 + g 72 -4 -5.10077 | CTAAAGTTATATGTT TGAT ATC ATCA TTTTTTGCAATATTT TERM 152 142854 - 142873 + H 87 -7.8 -4.91511 | opp_overlap 142856, overlap 142856 CCAAAAAAATAAATG AAGGGCCT TAAA AGGCCCTA TTTTTGTGGTAAAAT TERM 153 142856 - 142871 + H 91 -10.4 -4.08042 | opp_overlap 142856, overlap 142854 AAAAAAATAAATGAA GGGCCT TAAA AGGCCC TATTTTTGTGGTAAA TERM 154 142871 - 142856 - H 89 -10.4 -3.92523 | opp_overlap 142854 142856 AAAAAAATAAATGAA GGGCCT TAAA AGGCCC TATTTTTGTGGTAAA TERM 155 143203 - 143231 + G 100 -8.9 -5.09426 | overlap 143204 143210 TATACAAATTAGCAT CTCTAGGCCCAAC CTG GTTGGGTTTAGAA TTTTTTGGAATTAAC TERM 156 143204 - 143230 + G 100 -12.4 -3.64933 | overlap 143203 143210 ATACAAATTAGCATC TCTAGGCCCAAC CTG GTTGGGTTTAGA ATTTTTTGGAATTAA TERM 157 143210 - 143224 + G 86 -10 -3.8374 | overlap 143204 143203 ATTAGCATCTCTAGG CCCAAC CTG GTTGGG TTTAGAATTTTTTGG THA_148 142908 - 143357 + | hypothetical protein TERM 158 143517 - 143531 + G 72 -6.4 -4.23723 | TTAACAAATTTGCAA GAGCTA AAA TGGCTC TTTTAAATGGTATTG THA_149 143354 - 144625 + | hypothetical protein TERM 159 145855 - 145830 - g 86 -9.1 -3.91364 | opp_overlap 145830, overlap 145831 145842 AAAGCTATACAAGAA GTCTCAGAAGA CCTT TCTTCTGAGAA AAATATGGATAGATT TERM 160 145854 - 145831 - g 100 -12.6 -2.93734 | opp_overlap 145830, overlap 145830 145842 AAGCTATACAAGAAG TCTCAGAAGA CCTT TCTTCTGAGA AAAATATGGATAGAT TERM 161 145916 - 145934 + G 70 -8.8 -2.71712 | overlap 145915 AGAAGTTGCAATGCG GGCTGCTT TTA AAGCTGCC ATTTCCGGAAAACAG THA_150 144627 - 147356 + | transcription-repair coupling factor THA_151 147412 - 147723 + | hypothetical protein TERM 162 147758 - 147721 - T 100 -14.4 -5.63645 | opp_overlap 147725, overlap 147725 TTAAAAGAGAAAAAA TAAAGGATATCCCAAG TCTAAC CTTGGGATATCCTTTT TCTCATTGAATTTAT TERM 163 147725 - 147754 + T 100 -15.2 -4.98857 | opp_overlap 147721 147725 AAGAGAAAAAATAAA GGATATCCCAAG TCTAAC CTTGGGATATCC TTTTTCTCATTGAAT TERM 164 147754 - 147725 - T 100 -15.2 -5.19003 | opp_overlap 147725, overlap 147721 AAGAGAAAAAATAAA GGATATCCCAAG TCTAAC CTTGGGATATCC TTTTTCTCATTGAAT THA_152 148811 - 147738 - | DNA integrity scanning protein DisA TERM 165 148657 - 148680 + g 81 -8.4 -4.22377 | overlap 148658 AATTTAAATCCAGCC TGAAAAATAT CAGA ATATTTTTCA TATTTTTCTTCTGAA TERM 166 148999 - 149018 + r 75 -5 -5.03747 | overlap 149003 GCCCTACTGGTATTG TTAAGCCA TATT TGGCTAAA TTTTTTGCGGCATTT TERM 167 149923 - 149937 + r 72 -7.2 -3.90112 | opp_overlap 149922 149923 149925 TATATTATCATCAAT TACAGA ACG TCTGTA TTTCGTTACAAGAAC TERM 168 150073 - 150092 + r 75 -9.4 -2.79766 | opp_overlap 150089, overlap 150072 150084 150089 ATATGCAGATTCATA TCCATCTT ATAG AAGATGGA GTCTTCTTTGCTTTT TERM 169 150152 - 150128 - R 100 -13.7 -5.75822 | opp_overlap 150089, overlap 150089 GATAAACGAAAAAAA GGCCCCAATTT ATT AAATTGGAGCC TTAAAAATTTACTTA THA_153 150746 - 150180 - | glutamine amidotransferase subunit PdxT TERM 170 150474 - 150488 + g 75 -7.2 -4.11394 | TAGAGAGTCTTGAGG GAAGTT TAC AACTTC TTTTGAAAGTAAAAT THA_154 151628 - 150750 - | pyridoxine biosynthesis protein TERM 171 151278 - 151253 - G 74 -7.7 -3.85698 | opp_overlap 151253, overlap 151257 TCCTTGCTCCACAAA CAAATGGAACT TTAA AATCCCATTTG TTTATATGATACTTA THA_155 153327 - 151648 - | methylmalonyl-CoA mutase, N- domain/subunit THA_156 154003 - 153365 - | chain P, L-Fuculose-1-Phosphate Aldolase THA_157 154302 - 154000 - | RNA-binding protein THA_158 155099 - 154281 - | holo-[acyl-carrier-protein] synthase TERM 172 154874 - 154884 + g 71 -2.4 -5.38549 | opp_overlap 154868, overlap 154868 154865 TATGCATAACAAAAT AGGG CTT CCCG TTTTTGTTATTTAAA TERM 173 154970 - 155000 + g 78 -3.2 -5.66338 | opp_overlap 154975, overlap 154975 ATGATTCCTTTAGAG AAAAACGCCCAGCA AGA TATTGGGCGTTTAA TTTTTTGTTCTCTTT TERM 174 154995 - 154975 - G 85 -7.5 -4.96848 | opp_overlap 154975 154970 TCCTTTAGAGAAAAA CGCCCAGCA AGA TATTGGGCG TTTAATTTTTTGTTC TERM 175 154975 - 154995 + g 79 -7.5 -4.51301 | opp_overlap 154975, overlap 154970 TCCTTTAGAGAAAAA CGCCCAGCA AGA TATTGGGCG TTTAATTTTTTGTTC THA_159 156472 - 155096 - | pyruvate carboxylase subunit B infB 158565 - 156475 - | translation initiation factor IF-2 TERM 176 157595 - 157615 + g 91 -9.7 -4.21141 | ACTATTGTATCTCCA CCCCATTCC TCG GGAATGAGG TTTAATTTGTTAACA TERM 177 157794 - 157808 + g 78 -10 -3.06418 | opp_overlap 157784, overlap 157796 CTATATCAGTAGCCT GAGCAC CAC GTGCTC TCATTTCTGTAAAAA TERM 178 158263 - 158281 + g 90 -4.6 -5.77734 | CAATTTTAGATCTTC TTCAGTTA TTT TTACTGAA TTTTTCTTTTTGTTT THA_161 158796 - 158590 - | hypothetical protein THA_162 159651 - 158812 - | methyl-accepting chemotaxis protein McpA TERM 179 159294 - 159314 + g 91 -9.9 -4.13711 | overlap 159299 TTACAAGCTCTTCTA CTTTTGAAA ATT TTTCAAAAG TTTCTGATGTTTTAC THA_163 160421 - 159657 - | metallo-beta-lactamase family protein THA_164 160560 - 160414 - | hypothetical protein THA_165 160669 - 160553 - | hypothetical protein TERM 180 160606 - 160627 + g 75 -4.5 -5.04385 | opp_overlap 160608, overlap 160608 TACTATTTATTATAC CAGAAAAAT AAAC ATTTTTCAG TTTTTTAGAACTATA TERM 181 160658 - 160648 - G 72 -2.6 -5.39755 | TAGAACTATAAAAAA TATT AAC AATA CAAACTTTCATATTT TERM 182 160683 - 160699 + H 70 -4.5 -4.87291 | ATATTTATAAAGATT TAAGGTT ATT AACTTTA TTTTTACTTGAAATC THA_166 160780 - 161412 + | transporter TERM 183 161639 - 161671 + F 71 -2.1 -5.4833 | opp_overlap 161639 161640, overlap 161640 161641 GCCTTTATTTCAAAA CGTTTCTCAATCT CGAGGGA AGATTGAGAAAAA TTTTTTATTCAATAC TERM 184 161641 - 161669 + F 73 -9.1 -2.91664 | opp_overlap 161640 161639, overlap 161640 161639 CTTTATTTCAAAACG TTTCTCAATCT CGAGGGA AGATTGAGAAA AATTTTTTATTCAAT TERM 185 163053 - 163041 - f 72 -3.5 -5.30339 | AGTAAAAGAGAAAAA TATAA CAT TTATA GGTCCAATTTGTCCA THA_169 163547 - 164689 + | integral membrane protein TERM 186 164808 - 164797 - f 70 -7.2 -3.60234 | overlap 164789 TGAGAGAGCCTGAAA GGCG AGGA CGCC GAAGGGTGTAAGGTT TERM 187 164941 - 164883 - f 80 -10.6 -2.64144 | gap 2, opp_overlap 164892 164929 164930, overlap 164930 CTGTCACGGAAATAT CCGTGGAGAGCCGATCGTTGAGAATAAT TTTAT ATT-TTCTCAACGAACGCCTCTTCACG- AGGCGATTTTTTTTT TERM 188 164892 - 164933 + F 70 -8.2 -3.01791 | gap 1, opp_overlap 164883 164930, overlap 164929 164930 AAATATCCGTGGAGA GCCGATCGTTGAGAATAAT TTTAT ATT-TTCTCAACGAACGCC TCTTCACGAGGCGAT TERM 189 164929 - 164947 + F 100 -5.9 -6.36459 | opp_overlap 164883 164930, overlap 164892 164930 ATATTTTCTCAACGA ACGCCTC TTCAC GAGGCGA TTTTTTTTTATTAGG TERM 190 164946 - 164930 - f 78 -9.4 -3.34013 | opp_overlap 164892 164929 164930, overlap 164883 TATTTTCTCAACGAA CGCCTC TTCAC GAGGCG ATTTTTTTTTATTAG TERM 191 164930 - 164946 + F 91 -9.4 -4.39435 | opp_overlap 164883 164930, overlap 164892 164929 TATTTTCTCAACGAA CGCCTC TTCAC GAGGCG ATTTTTTTTTATTAG THA_170 164973 - 165941 + | asd aspartate-semialdehyde dehydrogenase dapF 165938 - 166651 + | diaminopimelate epimerase dapA 166644 - 167525 + | dihydrodipicolinate synthase dapB 167522 - 168175 + | dihydrodipicolinate reductase TERM 192 168262 - 168272 + G 70 -5.4 -4.5366 | opp_overlap 168262 168260 AATCTCAAAAATATA GACT TTA AGTC TTTTGAATTTTTTGG THA_174 168172 - 168873 + | tetrahydrodipicolinate succinylase TERM 193 169556 - 169535 - g 74 -3.1 -5.43866 | opp_overlap 169537, overlap 169537 GAACTTGCAAAAAAA TACAATATA AAAA TATATTGTG CTTCAACTTTTTCTG TERM 194 169554 - 169537 - g 70 -5.7 -4.35085 | opp_overlap 169537, overlap 169535 ACTTGCAAAAAAATA CAATATA AAAA TATATTG TGCTTCAACTTTTTC TERM 195 169759 - 169741 - g 72 -4.6 -4.96427 | opp_overlap 169741 TAATAATAAAATAAA CATTGACA TGA TTTCAATG TTTGCCGATAATGAA THA_175 168878 - 170077 + | aspartokinase 2 (Aspartokinase II) (Aspartate kinase 2) THA_176 170082 - 171242 + | acetylornithine aminotransferase THA_177 171279 - 171965 + | lipase/acylhydrolase, gdsl family, putative TERM 196 173213 - 173203 - g 82 -5.4 -5.36441 | TTGGGATACAAAAAA GGTA TGC TACC TATAACAGAAGAACT THA_178 172198 - 173331 + | DegT/DnrJ/EryC1/StrS aminotransferase TERM 197 173564 - 173543 - g 71 -3.1 -5.25803 | gap 1, opp_overlap 173545 173554, overlap 173545 AATTCTTACAAAAAA TCTTCCAGAA TTT TTC-GGAAAA TTTTCTTCTATAACT TERM 198 174093 - 174105 + G 73 -5.5 -4.56597 | overlap 174094 AACTACCTTCATATC TTGCC AGA GGCAG TTTTTGCAACCGAAG TERM 199 174192 - 174169 - g 85 -8.3 -4.6008 | opp_overlap 174174, overlap 174174 AAAATATAAGCAAAA GAAAACCTA TTATTT TAGGTTTTC CAACTTATGACTCAC THA_179 173343 - 174797 + | lnt apolipoprotein N-acyltransferase THA_180 174813 - 176105 + | hypothetical protein TERM 200 176604 - 176629 + G 72 -4.9 -4.85618 | opp_overlap 176604 CATATGGGACAAGTA TTAGTTGAA GGAAAAGA TTCAACTAA TTTTGTTAATTATTT TERM 201 177252 - 177234 - g 81 -8.2 -4.08692 | GAATTTGTTGGAAAA GCTGCTTT AGA AAAGCAAC TTGAAGAAGGTTTAA gcvT 176223 - 177533 + | glycine cleavage system T protein TERM 202 178138 - 178122 - g 77 -8.1 -3.71991 | overlap 178126 CAGAAAGTGGAACAA TAGATCT AGA AGATCTA AAATCTAAGATTGAT TERM 203 178179 - 178189 + G 72 -4 -5.11033 | CGGCAGTTGTAGTTG GTTA TCC TAAC TTTTTTGGAATTGTA THA_182 177554 - 178873 + | glycine dehydrogenase (decarboxylating) TERM 204 179996 - 179980 - g 81 -8.1 -4.34912 | overlap 179977 AAGTAAGCAAAATAA TGGATAT AGC ATATCCA GGAATATGTATGCAC THA_183 178893 - 180335 + | glycine dehydrogenase (decarboxylating) THA_184 180341 - 181420 + | alcohol dehydrogenase, iron-containing THA_185 181423 - 182592 + | SAM-dependent methyltransferase TERM 205 182823 - 182804 - g 81 -9.4 -3.63054 | opp_overlap 182803 182802 GAAATTTATATAGAA TCTCCAAT CTAC ATTGGAGA AGGTTATTTTTTATC THA_186 182594 - 184255 + | hypothetical protein THA_187 184271 - 184822 + | nudix-family protein TERM 206 185385 - 185400 + G 77 -7.6 -4.1822 | TGTGCCTGATTCAGG TGAACC TGAC GGTTCA TTTATTGAAATAGCC TERM 207 185624 - 185614 - g 70 -4 -4.89054 | CCCACAAAAAAAGAA TCAA ACG TTGA AAATGTAAATACCAT TERM 208 185784 - 185759 - g 78 -6.3 -4.79667 | overlap 185748 185761 AAAATGGAGTAAAAA TCCAAATTGAA AAAC TCCAATTTGAA CAAGCAGCTCCTCCT THA_188 184819 - 186042 + | succinyl-diaminopimelate desuccinylase THA_189 186062 - 187711 + | urocanate hydratase TERM 209 187719 - 187767 + T 100 -16.4 -3.53744 | opp_overlap 187714 187731, overlap 187731 TTGATTAAAATTTCT TAATATAAAAAATGGCTTTGGG GTTTA CCCAAAGCCATTTTTTTAATTA CTTTTATTTAACTGC TERM 210 187755 - 187731 - T 100 -14.4 -5.47159 | opp_overlap 187731 187719 TCTTAATATAAAAAA TGGCTTTGGG GTTTA CCCAAAGCCA TTTTTTTAATTACTT TERM 211 187731 - 187755 + T 100 -14.4 -5.66868 | opp_overlap 187731, overlap 187719 TCTTAATATAAAAAA TGGCTTTGGG GTTTA CCCAAAGCCA TTTTTTTAATTACTT THA_190 188942 - 187782 - | 2-oxoglutarate synthase subunit KorA THA_191 189162 - 188935 - | OorD subunit of 2-oxoglutarate:acceptor oxidoreductase THA_192 190310 - 189174 - | oxaloacetate decarboxylase beta chain THA_193 191203 - 190406 - | DNA polymerase III, gamma subunit-related protein THA_194 191859 - 191191 - | ABC-type cobalt transport system, ATPase component THA_195 192446 - 191877 - | hypothetical protein TERM 212 192515 - 192486 - R 79 -8.6 -3.86814 | opp_overlap 192485 AAAATGGATAAAAGA GCGCGAGAGG ATGTACATTG CCTCTCGCAC ATTAAATGATAAAAT THA_196 193652 - 192645 - | 6-phosphofructokinase THA_197 195605 - 193659 - | pyrophosphate-energized proton pump TERM 213 194785 - 194801 + g 72 -2.9 -5.44119 | overlap 194787 CCAAATCTCAAAGTT TTTGCAG GAT CAGCAGA TTTTTTTGCCCTCAA TERM 214 195589 - 195569 - G 78 -3.3 -5.54338 | GAATCAAAATAAAAA CAACTGAAA TTG CTCCAGTTA TCAAAAAATAAACCA TERM 215 195619 - 195658 + r 77 -2.9 -5.52096 | opp_overlap 195627 195628, overlap 195623 195627 AAAATCTCACCCCTT TAGATAAAGTTGAGGGC CTCAAA GCCCTCAAATTAACTTA TTTTTTATTCACTTT TERM 216 195650 - 195627 - R 74 -7.4 -4.03413 | opp_overlap 195627 195623 195619, overlap 195628 ACCCCTTTAGATAAA GTTGAGGGCC TCAA AGCCCTCAAA TTAACTTATTTTTTA TERM 217 195649 - 195628 - R 84 -10.9 -3.01726 | opp_overlap 195627 195623 195619, overlap 195627 CCCCTTTAGATAAAG TTGAGGGCC TCAA AGCCCTCAA ATTAACTTATTTTTT secF 196575 - 195667 - | protein-export membrane protein SecF secD 198005 - 196572 - | protein-export membrane protein SecD TERM 218 197484 - 197502 + g 81 -6.1 -5.02074 | opp_overlap 197483, overlap 197475 AACAAGTTTCAAATT GGAAATA TTTGC TATTTCC TTTTTTACCAAGTAC THA_200 198416 - 198024 - | membrane protein TERM 219 198429 - 198445 + r 71 -2.3 -5.33785 | CATAGAAACACCTCC TGTATTT TAA AAATTCA TTTTTTCTGCTGATT THA_201 199250 - 198435 - | bifunctional protein FolD THA_202 199627 - 199277 - | hypothetical protein thyX 200313 - 199627 - | thymidylate synthase, flavin-dependent rnhB 200953 - 200291 - | ribonuclease HII THA_205 201429 - 200953 - | lipoprotein, putative THA_206 202424 - 201429 - | esterase, putative THA_207 203128 - 202421 - | NAD-dependent deacetylase TERM 220 202992 - 202982 - GR 75 -4 -5.27938 | ATTTTCAAAGAAAAA TTGA AGA TCAA AAATTTTCTCGCCAT THA_208 203552 - 203091 - | chromate transport protein, putative THA_209 203889 - 203620 - | probable exodeoxyribonuclease VII small subunit, putative THA_210 205306 - 203861 - | exodeoxyribonuclease VII large subunit THA_211 207984 - 205306 - | DNA polymerase I THA_212 208327 - 207962 - | carboxymuconolactone decarboxylase THA_213 210419 - 208332 - | cell division protein FtsA THA_214 212722 - 210425 - | MutS2 protein TERM 221 212587 - 212542 - G 100 -14.3 -4.8048 | opp_overlap 212543 212545, overlap 212543 212544 212552 GTCTTATATCAAAAA GCCTATGAAATACAGGTAACC CTTG GGTTACCTGTATTTCATATAT TTCATTTAAGTATTC TERM 222 212586 - 212543 - G 100 -17.8 -3.47806 | opp_overlap 212543 212545, overlap 212542 212544 212552 TCTTATATCAAAAAG CCTATGAAATACAGGTAACC CTTG GGTTACCTGTATTTCATATA TTTCATTTAAGTATT TERM 223 212543 - 212586 + g 100 -15.6 -4.10159 | opp_overlap 212543 212542 212544 212552, overlap 212545 TCTTATATCAAAAAG CCTATGAAATACAGGTAACC CTTG GGTTACCTGTATTTCATATA TTTCATTTAAGTATT TERM 224 212585 - 212544 - G 100 -19.1 -2.68202 | opp_overlap 212543 212545, overlap 212543 212542 212552 CTTATATCAAAAAGC CTATGAAATACAGGTAACC CTTG GGTTACCTGTATTTCATAT ATTTCATTTAAGTAT TERM 225 212545 - 212584 + g 100 -22.6 -3.63425 | opp_overlap 212544 212543 212542 212552, overlap 212543 TTATATCAAAAAGCC TATGAAATACAGGTAACC CTTG GGTTACCTGTATTTCATA TATTTCATTTAAGTA TERM 226 212577 - 212552 - G 100 -14.9 -3.79623 | opp_overlap 212545 212543, overlap 212544 212543 212542 AAAAAGCCTATGAAA TACAGGTAACC CTTG GGTTACCTGTA TTTCATATATTTCAT THA_215 213378 - 212734 - | hypothetical protein THA_216 214604 - 213411 - | sodium/phosphate symporter THA_217 215288 - 214617 - | hypothetical protein THA_218 216013 - 215312 - | hypothetical protein TERM 227 215749 - 215761 + gH 85 -3.5 -5.72622 | opp_overlap 215749 CAAAAAAAGATAATA TTTTT TCT AAAAA TTTTTTGTTTATAAA THA_219 215978 - 216097 + | hypothetical protein THA_220 216971 - 216291 - | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase TERM 228 216608 - 216618 + g 82 -4 -5.55698 | CTCCAAACAGTTTTG CATT TTC AATG TTTTTTTCAATTATA THA_221 217843 - 216977 - | transcriptional regulator, putative TERM 229 217370 - 217389 + g 70 -4.2 -4.88129 | TGGAAGATCTTCTTT TCTTTCCC TTAA GGGGGGGA TTTTTACTCCTTTTT TERM 230 217828 - 217796 - G 100 -13.5 -4.9725 | overlap 217797 ATGTTCATATAAAAA CTCCCTCAGGCTCTC AAC AAGAACCTGAGGGAT TAGAAGTTTAATCAA TERM 231 217827 - 217797 - G 100 -17 -3.57627 | overlap 217796 TGTTCATATAAAAAC TCCCTCAGGCTCTC AAC AAGAACCTGAGGGA TTAGAAGTTTAATCA THA_222 218829 - 217945 - | phosphate acetyltransferase TERM 232 218045 - 218016 - G 74 -7.3 -3.90744 | opp_overlap 218019, overlap 218019 CGGCCCTTGAAACAA TAATTATTGGAAC TTTT GCTCCCATAATTA TTCCAGCAATCTTAC THA_223 219649 - 218834 - | D-aminopeptidase superfamily TERM 233 219133 - 219147 + g 71 -7.2 -3.85698 | opp_overlap 219128, overlap 219128 TTGCTGAAAATCTTC CTAAAG ATT CTTTAG TTTCTACAAAAAAAA TERM 234 219247 - 219264 + g 70 -3.5 -5.07107 | gap 1, overlap 219250 CAGCATAAGCTGCAT TG-ATGAG AGC CTCATTCA TTTTTTGACCATTTA TERM 235 220204 - 220182 - g 75 -4.2 -5.28166 | opp_overlap 220182 GAAAATGAAGAAAAA GGTCCTTT AGTAAGA AAAAGACC TTTACTTATAACTCC dnaA 219924 - 221240 + | chromosomal replication initiator protein DnaA THA_225 221282 - 221464 + | hypothetical protein TERM 236 221504 - 221465 - f 90 -10.2 -4.05607 | gap 1, opp_overlap 221471, overlap 221471 221476 ACAGTAGAAGAATAA TAGATATTAAAGGCCGGGA TTT TCCCGGCCTTTGATTT-TA TCCGGCAGTTAGTCC TERM 237 221499 - 221471 - f 100 -16.1 -3.23302 | opp_overlap 221471, overlap 221465 221476 GAAGAATAATAGATA TTAAAGGCCGGGA TTT TCCCGGCCTTTGA TTTTATCCGGCAGTT TERM 238 221471 - 221499 + F 100 -18.3 -4.37658 | opp_overlap 221471 221465 221476 GAAGAATAATAGATA TTAAAGGCCGGGA TTT TCCCGGCCTTTGA TTTTATCCGGCAGTT TERM 239 221494 - 221476 - f 100 -16 -3.93985 | opp_overlap 221471, overlap 221471 221465 ATAATAGATATTAAA GGCCGGGA TTT TCCCGGCC TTTGATTTTATCCGG TERM 240 223158 - 223138 - g 77 -7.7 -4.14739 | TGATGCATTTGAAAA TGAATTCCT AAA AGAAATTCA AAACGATTTAAATTT THA_226 221693 - 223513 + | hypothetical protein THA_227 223546 - 224643 + | basic membrane protein TERM 241 224675 - 224656 - f 72 -9.2 -2.71859 | opp_overlap 224657, overlap 224655 224654 TAATCTATAAAAATT TTGGGGGC ATCC GCCCCCAT TGCTTTGTCATTTTA TERM 242 224657 - 224674 + F 100 -12.7 -3.67925 | opp_overlap 224656 224655 224654 AATCTATAAAAATTT TGGGGGC ATCC GCCCCCA TTGCTTTGTCATTTT TERM 243 224691 - 224708 + F 72 -8.5 -3.05384 | TGCTTTGTCATTTTA CTAAGGT TAAA ACCTTAG TTAAGTGACAAAGCG THA_228 224744 - 226267 + | sugar ABC transporter, ATP-binding protein THA_229 226269 - 227303 + | sugar ABC transporter, permease protein THA_230 227300 - 228259 + | sugar ABC transporter, permease protein TERM 244 228290 - 228329 + F 100 -6.6 -5.66229 | opp_overlap 228289 228284 228290 TAATATAAACAAAAG TCCCTCTTCTTGAA AAACCAACTAAA ATCAAGAAGAGGGA TTTTTTATTATTACT TERM 245 228639 - 228658 + F 75 -5 -5.03747 | overlap 228643 GCCCTACTGGTATTG TTAAGCCA TATT TGGCTAAA TTTTTTGCGGCATTT THA_231 230024 - 230461 + | hypothetical protein TERM 246 230520 - 230491 - T 100 -10.2 -5.71712 | gap 1, opp_overlap 230490 230495, overlap 230495 TTTTATATAAAAAAA CAAAGAGGATAGC TCTTT GCTATCCTC-TTG CCTTGGCGGGGACGA TERM 247 230495 - 230517 + T 89 -12.1 -3.17075 | opp_overlap 230495 230491, overlap 230490 ATATAAAAAAACAAA GAGGATAGC TCTTT GCTATCCTC TTGCCTTGGCGGGGA TERM 248 230517 - 230495 - T 100 -12.1 -5.29742 | opp_overlap 230490 230495, overlap 230491 ATATAAAAAAACAAA GAGGATAGC TCTTT GCTATCCTC TTGCCTTGGCGGGGA THA_234 231547 - 230849 - | transporter THA_235 231691 - 231572 - | hypothetical protein THA_236 232439 - 231699 - | DegV family protein radA 233776 - 232436 - | DNA repair protein RadA TERM 249 233617 - 233648 + g 79 -7.4 -4.43681 | opp_overlap 233615 233623, overlap 233623 AACTATCATCAAGCA AAAAAATGCGGG AACTTAAA CCCGCATTTTTC TTTTCATCTTCACTA TERM 250 233623 - 233642 + g 90 -6.4 -5.52079 | opp_overlap 233615 233623, overlap 233617 CATCAAGCAAAAAAA TGCGGG AACTTAAA CCCGCA TTTTTCTTTTCATCT TERM 251 233642 - 233623 - G 90 -6.4 -5.65513 | opp_overlap 233623 233617, overlap 233615 CATCAAGCAAAAAAA TGCGGG AACTTAAA CCCGCA TTTTTCTTTTCATCT THA_238 236228 - 233769 - | ClpC ATPase TERM 252 234008 - 234020 + g 70 -6.3 -4.09649 | opp_overlap 234008 234007, overlap 234013 ACTCAAGCAAAATAC CTTTC TCA GAAAG TCTTTTTCTGATATC TERM 253 234929 - 234940 + g 72 -4.4 -5.05153 | TTTCATATTCTTGAT TTGC TGCA GCAA TTTCTTTTTTCAACT THA_239 238550 - 236310 - | PHP domain protein THA_240 238652 - 239128 + | phosphodiesterase THA_241 239138 - 239785 + | hypothetical protein TERM 254 239980 - 239970 - g 70 -4 -4.98255 | opp_overlap 239970 GTGGAAGTAGAAAAA TTTG TTC CAAA TTCCCTTATTAAGGT TERM 255 240378 - 240364 - g 77 -5.8 -5.00851 | AGGAAGTAAATAAAA CTATTA GTA TAATAG AAGAAGAACTTCATA THA_242 239919 - 240845 + | magnesium transporter, CorA family TERM 256 241600 - 241583 - g 72 -2.7 -5.4148 | TAAACAACCAAAAAA TCTAGGA AAAA TGCTAGA AAAAATTGATTATGA THA_243 240879 - 241907 + | aldose 1-epimerase THA_244 242922 - 241891 - | L-allo-threonine aldolase TERM 257 241984 - 241999 + g 93 -9 -4.96501 | opp_overlap 241983 241981 241984 AACAAACCTAAATAT TCCGTC ATCA GACGGA TTTATTTTTATACCA TERM 258 241999 - 241984 - G 70 -9 -2.71691 | opp_overlap 241984, overlap 241983 241981 AACAAACCTAAATAT TCCGTC ATCA GACGGA TTTATTTTTATACCA TERM 259 242988 - 242947 - R 100 -14.7 -2.8474 | opp_overlap 242957, overlap 242957 CTCCAGCTACAATTA TAACAAAAAAGGGGCTGAA AAAC TTCAGCCCCTTTTATATCA GATCTTCATTAATTA TERM 260 242978 - 242957 - R 100 -14.5 -5.59534 | opp_overlap 242957, overlap 242947 AATTATAACAAAAAA GGGGCTGAA AAAC TTCAGCCCC TTTTATATCAGATCT TERM 261 242957 - 242978 + r 100 -14.5 -4.54449 | opp_overlap 242957 242947 AATTATAACAAAAAA GGGGCTGAA AAAC TTCAGCCCC TTTTATATCAGATCT THA_245 243687 - 243001 - | hypothetical protein TERM 262 244396 - 244425 + r 100 -10.9 -4.32579 | opp_overlap 244403 244421, overlap 244398 TAACTGGGACTTTTT TACTATACCTTGT ATTT ACAAGGTATAGAA TTTGTTCTAAAATCT TERM 263 244398 - 244423 + r 100 -13.5 -2.50813 | opp_overlap 244403 244421, overlap 244396 ACTGGGACTTTTTTA CTATACCTTGT ATTT ACAAGGTATAG AATTTGTTCTAAAAT THA_247 245442 - 244654 - | thioredoxin reductase-related protein THA_248 245993 - 245427 - | isochorismatase-related protein TERM 264 245836 - 245846 + g 89 -4 -5.9362 | opp_overlap 245836 CCTTTTTGCAAAAAT CTTT CCG AAAG TTTTTTTATATTTTC THA_249 246883 - 245990 - | radical SAM domain protein TERM 265 246700 - 246727 + g 91 -8.6 -4.73092 | opp_overlap 246700 TCATATCAACACTAA TTTCTTTCCAGA CTAT TCTTGAAAGAAA TTTATTTTCCGTTCT TERM 266 246727 - 246700 - G 76 -8.6 -3.40907 | opp_overlap 246700 TCATATCAACACTAA TTTCTTTCCAGA CTAT TCTTGAAAGAAA TTTATTTTCCGTTCT recG 249206 - 246897 - | ATP-dependent DNA helicase RecG TERM 267 249097 - 249069 - G 100 -9.7 -4.43501 | opp_overlap 249068 249070, overlap 249070 AATGTATGTATAAAA TTCCTGAAGTCTT TTG AAAACTTCAGGAT CTTCTTTTAAAGGGT TERM 268 249096 - 249070 - G 100 -13.2 -3.25378 | opp_overlap 249068 249070, overlap 249069 ATGTATGTATAAAAT TCCTGAAGTCTT TTG AAAACTTCAGGA TCTTCTTTTAAAGGG TERM 269 249070 - 249096 + g 90 -11 -3.68435 | opp_overlap 249070 249069, overlap 249068 ATGTATGTATAAAAT TCCTGAAGTCTT TTG AAAACTTCAGGA TCTTCTTTTAAAGGG THA_251 249912 - 249223 - | lipoprotein-releasing system ATP-binding protein LolD TERM 270 250319 - 250309 - g 78 -4 -5.42259 | opp_overlap 250309 GGACTTTTAAAAAAA TTTG ATG CAAA TATTTACTTAAATTC THA_252 249970 - 250587 + | thiamine pyrophosphokinase TERM 271 250822 - 250783 - g 83 -6.6 -5.02476 | gap 1, opp_overlap 250788, overlap 250788 ATATGGTGGAAAAAA TCAA-ACCTGATATTGTAG TTG CTGCAATACCTGGTTTTGA TGGTGTTCTTGCAAC TERM 272 250788 - 250816 + G 76 -6.7 -4.36063 | opp_overlap 250783 250788 GTGGAAAAAATCAAA CCTGATATTGTAG TTG CTGCAATACCTGG TTTTGATGGTGTTCT TERM 273 250816 - 250788 - g 76 -6.7 -4.42765 | opp_overlap 250788, overlap 250783 GTGGAAAAAATCAAA CCTGATATTGTAG TTG CTGCAATACCTGG TTTTGATGGTGTTCT THA_253 250566 - 251627 + | 1-deoxy-D-xylulose 5-phosphate reductoisomerase THA_254 251878 - 252756 + | iron (III) ABC transporter, periplasmic-binding TERM 274 252776 - 252806 + G 100 -17.8 -4.01047 | opp_overlap 252772 252770 252779, overlap 252779 TAAAATAAACATTTA TAAGACTGGAAGGA TCA TCCTTCCAGTCTTG TTCTTCTTAGTAATT TERM 275 252803 - 252779 - g 100 -17.3 -3.46874 | opp_overlap 252776 252779, overlap 252772 252770 AATAAACATTTATAA GACTGGAAGGA TCA TCCTTCCAGTC TTGTTCTTCTTAGTA TERM 276 252779 - 252803 + G 100 -17.3 -4.1157 | opp_overlap 252779 252772 252770, overlap 252776 AATAAACATTTATAA GACTGGAAGGA TCA TCCTTCCAGTC TTGTTCTTCTTAGTA TERM 277 253342 - 253355 + G 78 -3.1 -5.5074 | CAATTCCAGCAATAT CGGTA ATTG TACTG TTTTTTATTGCATTA THA_255 252756 - 253733 + | iron (III) ABC transporter, permease protein THA_256 253761 - 254564 + | NagD protein TERM 278 254626 - 254614 - g 71 -3.4 -5.25799 | overlap 254618 AAAAGAATAGAAAAA CTAG TTGAG CTAG CCCAAAGTGGATTAA THA_257 254575 - 255195 + | RNA polymerase sigma-H factor TERM 279 255619 - 255602 - T 100 -12.7 -5.81032 | overlap 255603 GAAGTTCAAAAAAAA GGTCCCG CATT CGGGACC TGGTGCCGAGGGCGG TERM 280 255637 - 255603 - T 100 -14.2 -4.06993 | overlap 255602 AAGTTCAAAAAAAAG GTCCCGCATTCGGGAC CTG GTGCCGAGGGCGGGAC TTGAACCCGCACGAG ribH 256214 - 255744 - | 6,7-dimethyl-8-ribityllumazine synthase ribB 257338 - 256214 - | A 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II ribE 257883 - 257344 - | riboflavin synthase, alpha subunit ribD 258895 - 257864 - | riboflavin biosynthesis protein RibD TERM 281 258034 - 258022 - G 71 -3.4 -5.31275 | TTGGAGCATAAAAAA GATG GAGTT CATC AGAAAAATCATAAAA TERM 282 258950 - 258988 + r 83 -6.9 -4.8622 | gap 2, opp_overlap 258950 GAACGAAATAAAAAA CACCCCC-GGA-AGTGATA AAA TATAACTATCTAGGGGGTG TTTTTCATTGGCAAA TERM 283 258988 - 258950 - R 90 -4.7 -5.72053 | gap 2, opp_overlap 258950 GAACGAAATAAAAAA CACCCCC-GGA-AGTGATA AAA TATAACTATCTAGGGGGTG TTTTTCATTGGCAAA TERM 284 259089 - 259076 - R 71 -5.3 -4.67982 | opp_overlap 259076 TTTCATTGAAGAAAA TCTTC CTAA GAAGA CTATTGCTTCTCTTT TERM 285 260089 - 260117 + r 77 -8.1 -3.91984 | opp_overlap 260089 GGCAAGGTTAAAAAA CATGGCTCCGGTG GAA TACCGAAACCATG TTGTTTGAAAAGTGT TERM 286 260117 - 260089 - R 100 -11.8 -5.09426 | opp_overlap 260089 GGCAAGGTTAAAAAA CATGGCTCCGGT GGAAT ACCGAAACCATG TTGTTTGAAAAGTGT TERM 287 260218 - 260197 - R 93 -8.1 -5.22312 | opp_overlap 260197 AGGGAGAGGAAAAAA GCATAAACG TATT CATTTATGC TTGTCCTCTCCCATC THA_263 262073 - 260373 - | methyl-accepting chemotaxis protein THA_264 262607 - 262209 - | SUF system FeS assembly protein, NifU family THA_265 263841 - 262600 - | cysteine desulfurase TERM 288 262792 - 262826 + gr 93 -11.6 -3.23979 | opp_overlap 262803 262814, overlap 262819 TGCCACTCCAAATTT TTCATCCAAAAGATGT GCA ACATCATGTGGATGAA TTCCATTAATATTAA TERM 289 262815 - 262803 - GR 70 -6.3 -4.18197 | opp_overlap 262792, overlap 262814 ATTTTTCATCCAAAA GATGT GCA ACATC ATGTGGATGAATTCC TERM 290 263669 - 263638 - GR 100 -20.4 -4.36914 | opp_overlap 263633 GTTTTTTCTAGAAAA CTCTAGCATCTGAG TTGA CTCAGATGCTAGAG TATGAACTGCTCTAT THA_266 264940 - 263816 - | SufB/sufD domain protein TERM 291 263984 - 264014 + g 74 -6.2 -4.371 | opp_overlap 263988 263989, overlap 263978 263985 TTCATCAAGTGGAGC AGAACTTGCTGCAT GTG ATGCAGTAACTTCA TTTTCATCTACTAAC TERM 292 263985 - 264013 + g 80 -9.7 -3.21778 | opp_overlap 263988 263989, overlap 263978 263984 TCATCAAGTGGAGCA GAACTTGCTGCAT GTG ATGCAGTAACTTC ATTTTCATCTACTAA TERM 293 264757 - 264768 + g 72 -4.4 -5.10064 | TCAACCTTTTCCATA TAGG AAAA CCTA TTTTTGTATATTCAC sufB 266342 - 264951 - | FeS assembly protein SufB sufC 267090 - 266347 - | FeS assembly ATPase SufC TERM 294 267225 - 267186 - R 100 -16 -3.0166 | opp_overlap 267194, overlap 267194 TGAAAAAATCAAGCA TAAAAAAATTCCCCGGAA AAGT TTCCGGGGAATTTGTCTA TTAAAATGATTATTA TERM 295 267217 - 267194 - R 100 -15.4 -5.71983 | opp_overlap 267194, overlap 267186 TCAAGCATAAAAAAA TTCCCCGGAA AAGT TTCCGGGGAA TTTGTCTATTAAAAT TERM 296 267194 - 267217 + r 100 -15.4 -4.21142 | opp_overlap 267194 267186 TCAAGCATAAAAAAA TTCCCCGGAA AAGT TTCCGGGGAA TTTGTCTATTAAAAT groL 268857 - 267238 - | chaperonin GroL TERM 297 268445 - 268465 + g 72 -7.7 -3.68738 | opp_overlap 268450, overlap 268443 268450 ATATCGTTTGTACTT GAAAGTTTC TTT GAAATTTTC TTAATTTCTTCGACA TERM 298 268450 - 268460 + g 70 -4 -4.88407 | opp_overlap 268450, overlap 268443 268445 GTTTGTACTTGAAAG TTTC TTT GAAA TTTTCTTAATTTCTT groS 269146 - 268874 - | chaperonin GroS TERM 299 269353 - 269325 - H 100 -13.2 -5.34555 | opp_overlap 269329 269346, overlap 269326 TTATATCACAAAAAA GGAAGGGAGGCA TTTTC TGCCTCCCTTCT GGTGGAGCCGATGGG TERM 300 269352 - 269326 - H 100 -16.7 -3.79649 | opp_overlap 269329 269346, overlap 269325 TATATCACAAAAAAG GAAGGGAGGCA TTTTC TGCCTCCCTTC TGGTGGAGCCGATGG TERM 301 269329 - 269349 + H 91 -12.6 -3.40403 | opp_overlap 269326 269325, overlap 269346 ATCACAAAAAAGGAA GGGAGGCA TTTTC TGCCTCCC TTCTGGTGGAGCCGA TERM 302 269666 - 269650 - g 81 -8.1 -4.08349 | ATTTCAAAAATACAA GTGTAAA AAA TTTACAC AAAGATTCTCAACTC THA_272 269526 - 269906 + | ribonuclease III family protein THA_273 269903 - 271621 + | hypothetical protein THA_274 271626 - 273014 + | TldD protein THA_275 273011 - 274318 + | TldD/PmbA family protein TERM 303 274319 - 274336 + F 100 -8.4 -5.63517 | opp_overlap 274319 ATTGCTGGTGAATAA GGCGGA TTTCTC TCCGCC TTTTTTATTTACAAA TERM 304 274336 - 274319 - f 75 -8.4 -3.61517 | opp_overlap 274319 ATTGCTGGTGAATAA GGCGGA TTTCTC TCCGCC TTTTTTATTTACAAA THA_276 274407 - 275483 + | amino acid racemase TERM 305 275509 - 275466 - T 89 -12 -3.07655 | opp_overlap 275477, overlap 275477 TTTGTTAAAAAAGAG TATATAAAAAATGCCTGACC ATAT GATCAGGCATTTTTTATTTT ATATATCATCTAGCT TERM 306 275498 - 275477 - T 100 -10.9 -5.40625 | opp_overlap 275477, overlap 275466 AGAGTATATAAAAAA TGCCTGACC ATAT GATCAGGCA TTTTTTATTTTATAT TERM 307 275477 - 275498 + T 100 -8.7 -5.8901 | opp_overlap 275477 275466 AGAGTATATAAAAAA TGCCTGACC ATAT GATCAGGCA TTTTTTATTTTATAT THA_277 276599 - 275508 - | hypothetical protein TERM 308 276653 - 276665 + r 76 -3.5 -5.48213 | opp_overlap 276653, overlap 276645 ATTTTGATTATAACA TAAAT TAT ATTTA TTTTTCTTTTAAATA TERM 309 276711 - 276699 - R 71 -7.7 -3.48807 | opp_overlap 276699 TTACTAAAGTTACAA TTCGC ATT GCGAA TTTTTAAATACTTTT TERM 310 276699 - 276711 + r 82 -7.7 -4.7329 | opp_overlap 276699 TTACTAAAGTTACAA TTCGC ATT GCGAA TTTTTAAATACTTTT queA 277739 - 276732 - | S-adenosylmethionine:tRNA ribosyltransferase-isomerase TERM 311 277787 - 277762 - R 100 -9.7 -5.00616 | opp_overlap 277750 277763, overlap 277763 CCTCCTTCTAAAAAA TTGGGGAGGTA ATTT CACCTCCCCAT TTTTCGATTATTTTC TERM 312 277786 - 277763 - R 100 -13.2 -3.60048 | opp_overlap 277750 277763, overlap 277762 CTCCTTCTAAAAAAT TGGGGAGGTA ATTT CACCTCCCCA TTTTTCGATTATTTT TERM 313 277763 - 277786 + r 100 -12.5 -4.85195 | opp_overlap 277763 277762, overlap 277750 CTCCTTCTAAAAAAT TGGGGAGGT AATTTC ACCTCCCCA TTTTTCGATTATTTT rpsO 278049 - 277795 - | ribosomal protein S15 proS 279841 - 278156 - | prolyl-tRNA synthetase cysS 281247 - 279838 - | cysteinyl-tRNA synthetase gltX1 282675 - 281254 - | glutamyl-tRNA synthetase TERM 314 282350 - 282378 + g 71 -7.5 -3.81022 | overlap 282356 TTTTCTATTTCTTCA GGGTAAGCATATA CTT TGTATGCTTTTCC TTCTTCTACAAGTTT TERM 315 282356 - 282372 + g 73 -5.9 -4.59414 | overlap 282350 ATTTCTTCAGGGTAA GCATATA CTT TGTATGC TTTTCCTTCTTCTAC uraA 282893 - 284107 + | uracil permease TERM 316 284130 - 284114 - f 74 -3.8 -5.21236 | overlap 284116 284127 AATCGATAATAAAAA GATATT TTAAC AATATC AAGCTCCAGCTTTAA TERM 317 284133 - 284154 + F 100 -14.5 -5.7946 | opp_overlap 284127 284116 284133 TTTTAACAATATCAA GCTCCAGCT TTAA AGCTGGAGC TTTTTTTATTAACAA TERM 318 284154 - 284133 - f 100 -14.5 -3.46509 | opp_overlap 284133, overlap 284127 284116 TTTTAACAATATCAA GCTCCAGCT TTAA AGCTGGAGC TTTTTTTATTAACAA THA_284 284344 - 285216 + | hypothetical protein THA_285 285237 - 285887 + | lipoprotein, putative THA_286 285905 - 286567 + | laminarinase TERM 319 286611 - 286590 - T 100 -13.1 -5.0133 | opp_overlap 286590 TATTCTTTTAAAAAA GTGGCTTTG GTTC CAAAGCCAC TTTTTGATTTCTAAT TERM 320 286590 - 286611 + T 100 -13.1 -5.05505 | opp_overlap 286590 TATTCTTTTAAAAAA GTGGCTTTG GTTC CAAAGCCAC TTTTTGATTTCTAAT THA_287 287668 - 286688 - | putative acyltransferase, putative TERM 321 288991 - 288976 - g 72 -9 -2.92496 | overlap 288973 TTAGAAACAAGATTA TCGCCT TTGA AGGCGA TGAAAGCCTAATTGG miaB 287790 - 289079 + | tRNA-I(6)A37 thiotransferase enzyme MiaB THA_289 289093 - 289956 + | transporter TERM 322 290190 - 290175 - g 79 -5.4 -5.26918 | opp_overlap 290175 ACATTGTATAAAAAA CACAGC TGGT GCTATG ATTGTAAGCGAAATA THA_290 289966 - 290310 + | pyrazinamidase/nicotinamidase-related protein TERM 323 290444 - 290430 - f 79 -10 -2.88069 | overlap 290427 CTCATACGATAAGCA GCTGCA TAA TGCAGC ACTAAAAATAATGTC THA_291 290503 - 291417 + | cation efflux family protein THA_292 291407 - 292516 + | hypothetical protein TERM 324 292549 - 292514 - T 100 -17.8 -4.10552 | opp_overlap 292519, overlap 292519 AAGAGGATAAAAATA TAAAACAACCGAAGGC ATTT GCCTTCGGTTGTTTTT TTTATAATTCAACAT TERM 325 292519 - 292544 + T 100 -17.7 -6.02345 | opp_overlap 292514 292519 GATAAAAATATAAAA CAACCGAAGGC ATTT GCCTTCGGTTG TTTTTTTTATAATTC TERM 326 292544 - 292519 - T 100 -17.7 -5.02287 | opp_overlap 292519, overlap 292514 GATAAAAATATAAAA CAACCGAAGGC ATTT GCCTTCGGTTG TTTTTTTTATAATTC galT1 293549 - 292551 - | galactose-1-phosphate uridylyltransferase THA_294 295021 - 293564 - | glycogen synthase TERM 327 294781 - 294796 + g 71 -4.8 -4.79667 | TTCCAGGTATAAATG TTTGAT AAAT ATCAAA TTTTTCATCCGTTTT THA_295 295656 - 295027 - | metallo-beta-lactamase superfamily, putative TERM 328 295543 - 295553 + g 70 -4 -4.9725 | TACATAATCTCCAGG TTCT ATA AGAA TTTTTCTATCACCAT THA_296 297361 - 295676 - | sigma-54 dependent transcriptional regulator TERM 329 296532 - 296551 + g 70 -3.6 -5.17576 | gap 1 CCCCTAAGTAATACC GTTGC-AGG GGT CTTAGCAAC TTTTTTAGCTTGCTC TERM 330 297292 - 297253 - G 100 -11 -4.35524 | gap 2, overlap 297235 CTTTCAAATTTAAAA GACGCACGGCCATCTTGT TTATAT ACAAGAT--CCGTGCGTC ACTATCAACTATTAT THA_297 297774 - 297364 - | hypothetical protein THA_298 298709 - 297771 - | D-alanine-D-alanine ligase family protein THA_299 300346 - 298706 - | methionine synthase I, cobalamin-binding domain protein THA_300 301427 - 300348 - | NAD/nadp octopine/nopaline dehydrogenase THA_301 302422 - 301463 - | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding, putative THA_302 303650 - 302427 - | putative hydroxypyruvate reductase TERM 331 302674 - 302703 + g 70 -5.8 -4.19974 | gap 1 TTCATATTTTCTATT TCAAGTGCTGCTG AATAA CA-CAGCTCTTGA TTTCTTCCACCTTTT nadE1 304512 - 303640 - | NAD+ synthetase dnaJ 305635 - 304496 - | chaperone protein DnaJ grpE 306231 - 305641 - | co-chaperone GrpE TERM 332 306021 - 306033 + g 72 -6.3 -4.21936 | opp_overlap 306020 306021 CATCTTTTTTATAAT TCTCA AAT TGAGA TTTTAAAATTCTAGC hrcA 307283 - 306246 - | heat-inducible transcription repressor HrcA TERM 333 307377 - 307343 - R 100 -20.4 -3.71378 | opp_overlap 307348 307352 307371, overlap 307348 307352 GATTTTACAGTCAAA TAAAATAAAGGCTCCA ATA TGGAGCCTTTATTTTA AAAAATATTACCTTT TERM 334 307372 - 307348 - R 100 -15.9 -4.92385 | opp_overlap 307348 307352 307371, overlap 307343 307352 TACAGTCAAATAAAA TAAAGGCTCCA ATA TGGAGCCTTTA TTTTAAAAAATATTA TERM 335 307348 - 307372 + r 100 -15.9 -4.11371 | opp_overlap 307348 307343 307352, overlap 307352 307371 TACAGTCAAATAAAA TAAAGGCTCCA ATA TGGAGCCTTTA TTTTAAAAAATATTA TERM 336 307368 - 307352 - R 100 -12.3 -4.96996 | opp_overlap 307348 307352, overlap 307348 307343 GTCAAATAAAATAAA GGCTCCA ATA TGGAGCC TTTATTTTAAAAAAT TERM 337 307352 - 307368 + r 100 -12.3 -4.65263 | opp_overlap 307352 307348 307343, overlap 307348 GTCAAATAAAATAAA GGCTCCA ATA TGGAGCC TTTATTTTAAAAAAT THA_307 308663 - 307395 - | major facilitator superfamily MFS_1 THA_308 309166 - 308660 - | transcriptional regulator, biotin repressor family TERM 338 310616 - 310626 + r 74 -4 -5.1523 | opp_overlap 310616 TCTACCTATGAGGAA TGAA AAC TTCA TTTTTGTATTATACA TERM 339 312014 - 312038 + r 86 -7.2 -4.84262 | opp_overlap 312019, overlap 312019 TATCTAAACAAACAA AAAAAGGAGG GATAA CCTCCTTTTA TTTTGTTACTTATTA TERM 340 312033 - 312019 - R 100 -7.1 -6.11392 | opp_overlap 312014 312019 AAACAAACAAAAAAA GGAGG GATAA CCTCC TTTTATTTTGTTACT TERM 341 312019 - 312033 + r 91 -7.1 -5.28831 | opp_overlap 312019, overlap 312014 AAACAAACAAAAAAA GGAGG GATAA CCTCC TTTTATTTTGTTACT THA_309 313075 - 312329 - | crispr-associated ramp protein, Cmr6 family, putative TERM 342 312933 - 312923 - G 75 -4 -5.19212 | ATTATTATTAAAAAA TACT TTA AGTA GATTATCTAAATCTT THA_310 313503 - 313093 - | cmr crispr-associated protein, Cmr5 family THA_311 314377 - 313493 - | cmr crispr-associated ramp protein, Cmr4 family THA_312 315443 - 314391 - | cmr crispr-associated protein, Cmr3 family TERM 343 315360 - 315378 + g 71 -3.2 -5.24449 | overlap 315361 ATTTGGAAAAATTGT ATTTTCAA AAG TTGAAAAA TTTTTTGACTTTCTG THA_313 317919 - 315436 - | crispr-associated protein, Crm2 family, putative TERM 344 316690 - 316706 + g 82 -6.7 -4.87291 | CTTAAAATTTCGTGT GTTTTTT CTC AAAAAAC TTTTTGCTTGAAGTA TERM 345 317808 - 317822 + g 70 -5.8 -4.22948 | TTTGTTTCAAGCCGA CTTTAT TTA ATAAAG TTTTAGCTAAGTTTT THA_314 319157 - 317937 - | crispr-associated ramp protein TERM 346 318322 - 318345 + g 70 -4 -4.96028 | GAACCTCTTAACTTT TTTTTCAAAT TTAA ATATGAAAAA TTATTTTTTTTAGAA TERM 347 318391 - 318401 + g 88 -4 -5.75822 | AGAGCATTTTCGTAT GAAT AAA ATTC TTTTTTTAATTTATA THA_315 319903 - 319181 - | cas crispr-associated protein Cas6 THA_316 321350 - 319914 - | crispr-associated protein, family TERM 348 321357 - 321342 - G 72 -2.6 -5.4477 | overlap 321316 AAAGGTTGAAAAAAA TAGCTT CATA AAACTA CCCCCTAATTTTTTC THA_317 322794 - 321355 - | hypothetical protein TERM 349 322010 - 322022 + g 75 -4.9 -5.02476 | TTGACAAAAACTTTA TTTAC ATC GTAAA TTTTTTCAAAAATAT THA_318 323558 - 322794 - | hypothetical protein TERM 350 323296 - 323278 - G 100 -10.4 -5.0916 | TCTTCAATATAAAAA TTTACGTG TGT CACGTAAA CATAATCAACTAAAT TERM 351 323307 - 323317 + g 76 -2.6 -5.61881 | opp_overlap 323307 GTAAACATAATCAAC TAAA TGA TTTA TTTTTATTTTTAAAG TERM 352 323452 - 323462 + g 76 -6.8 -4.4078 | ACAAAAACATCTCCT GCCT CCA AGGC TTTTCCTTCAGGCAC THA_319 324242 - 323568 - | hypothetical protein THA_320 324658 - 324245 - | hypothetical protein THA_321 324981 - 324712 - | crispr-associated protein Cas2 THA_322 325970 - 324987 - | cas crispr-associated protein Cas1 TERM 353 325790 - 325779 - G 88 -4.4 -5.73339 | opp_overlap 325779, overlap 325780 ATAACCATAAAAAAA GGTA GGTA TACC TTCTTTCGCTAACAA THA_323 326248 - 325985 - | crispr-associated protein Cas2 TERM 354 326294 - 326276 - R 83 -6.6 -4.7416 | opp_overlap 326277, overlap 326257 326277 TTAAAACTTTAAAAA GGCCTGGA AGA CCCAGGCT TTAAGTCGATATAGA TERM 355 326277 - 326293 + r 82 -9.4 -3.67792 | opp_overlap 326277 326276 TAAAACTTTAAAAAG GCCTGG AAGAC CCAGGC TTTAAGTCGATATAG TERM 356 326293 - 326277 - R 84 -10.1 -3.43411 | opp_overlap 326277, overlap 326276 TAAAACTTTAAAAAG GCCTGGA AGA CCCAGGC TTTAAGTCGATATAG THA_324 326672 - 326295 - | hypothetical protein TERM 357 326744 - 326765 + r 91 -11.7 -3.56821 | opp_overlap 326744 326753 ATCTGACATAAAAAA TTGGAGCAA TTAA TTGCTCCAA TTTAAAAAATATAAT TERM 358 326765 - 326744 - R 100 -11.7 -5.37043 | opp_overlap 326744, overlap 326753 ATCTGACATAAAAAA TTGGAGCAA TTAA TTGCTCCAA TTTAAAAAATATAAT TERM 359 327714 - 327692 - R 80 -6.2 -4.81249 | opp_overlap 327692 327694, overlap 327694 TTCTAAACGCAAAAA TGGGGGCC AATCACA GGCCCCTA TTTTGTTGCGTTTTC TERM 360 327692 - 327714 + r 90 -8.4 -4.77719 | opp_overlap 327692 327694, overlap 327694 TTCTAAACGCAAAAA TGGGGGCC AATCACA GGCCCCTA TTTTGTTGCGTTTTC TERM 361 327694 - 327712 + r 82 -8.8 -3.98064 | opp_overlap 327694 327692, overlap 327692 CTAAACGCAAAAATG GGGGCC AATCACA GGCCCC TATTTTGTTGCGTTT TERM 362 328691 - 328680 - R 70 -4.4 -4.83518 | opp_overlap 328680 AATAATAATAGAAAA CAGA TTAT TCTG TGATTTTCGTTTTCA TERM 363 329109 - 329095 - R 87 -10 -3.85698 | CGGTGGGTTTAGAAA TGCCCA ATG TGGGCA AAAACAAATAAGGGT TERM 364 330066 - 330025 - R 79 -2.6 -5.88476 | gap 1, opp_overlap 330030, overlap 330027 330030 AAAACAAATAAAAAA TATAATTTGAGTTTTAATG GCTAA CTTTAAAACACAAATT-TA AAAACATTAATATTA TERM 365 330244 - 330272 + r 100 -11.8 -5.09426 | opp_overlap 330244 ACACTTTTCAAACAA CATGGTTTCGGT ATTCC ACCGGAGCCATG TTTTTTAACCTTGCC TERM 366 330272 - 330244 - R 77 -8.1 -3.91984 | opp_overlap 330244 ACACTTTTCAAACAA CATGGTTTCGGTA TTC CACCGGAGCCATG TTTTTTAACCTTGCC TERM 367 331273 - 331286 + r 71 -5.3 -4.67982 | opp_overlap 331273 AAAGAGAAGCAATAG TCTTC TTAG GAAGA TTTTCTTCAATGAAA TERM 368 331374 - 331412 + r 90 -4.7 -5.72053 | gap 2, opp_overlap 331374 TTTGCCAATGAAAAA CACCCCCTAGATAGTTATA TTT TATCACT-TCC-GGGGGTG TTTTTTATTTCGTTC TERM 369 331412 - 331374 - R 83 -6.9 -4.8622 | gap 2, opp_overlap 331374 TTTGCCAATGAAAAA CACCCCCTAGATAGTTATA TTT TATCACT-TCC-GGGGGTG TTTTTTATTTCGTTC THA_325 331923 - 331504 - | fkbp-type peptidyl-prolyl cis-trans isomerase THA_326 333188 - 331986 - | transporter, major facilitator family TERM 370 332158 - 332141 - G 71 -5.5 -4.47551 | ATTCAACTGACAAAA CTGAGGC AAGA GCATCAG ATTCAACATTGTCTC THA_327 334122 - 333172 - | AstB/chuR-related protein TERM 371 334795 - 334807 + G 74 -6.3 -4.3778 | opp_overlap 334795 CTTAAAAAAATAAAA CATCA ATT TGATG TTTACTTTATTTTTT TERM 372 334807 - 334795 - g 90 -6.3 -5.55855 | opp_overlap 334795 CTTAAAAAAATAAAA CATCA ATT TGATG TTTACTTTATTTTTT THA_328 334222 - 335238 + | endoglucanase THA_329 335239 - 336246 + | endoglucanase M TERM 373 336269 - 336295 + T 100 -18.2 -6.28631 | opp_overlap 336269 ATTATGCAATAAAAA CATGACCCTGAA AAA TTCAGGGTCATG TTTTTTTTTACTTTA TERM 374 336295 - 336269 - T 100 -18.2 -5.11063 | opp_overlap 336269 ATTATGCAATAAAAA CATGACCCTGAA AAA TTCAGGGTCATG TTTTTTTTTACTTTA rpoZ 336530 - 336303 - | DNA-directed RNA polymerase, omega subunit THA_331 337146 - 336514 - | gmk guanylate kinase THA_332 337432 - 337148 - | hypothetical protein THA_333 338325 - 337450 - | hypothetical protein TERM 375 338163 - 338186 + g 76 -6.2 -4.64861 | opp_overlap 338162 338163 CACGGGTCAAAAAAC TTGAAATTAT CTTA GTAATTTCAA TTTCTTTTGAAGACA TERM 376 338438 - 338416 - R 100 -9.8 -4.87291 | overlap 338418 338419 TATCTTAATTAAAAA GACGGGACCC AAA GGGTCCCATA ATGAGGGCTTTATCT TERM 377 338436 - 338418 - R 100 -12.4 -4.05402 | overlap 338416 338419 TCTTAATTAAAAAGA CGGGACCC AAA GGGTCCCA TAATGAGGGCTTTAT TERM 378 338435 - 338419 - R 100 -13.7 -3.02518 | overlap 338418 338416 CTTAATTAAAAAGAC GGGACCC AAA GGGTCCC ATAATGAGGGCTTTA porG 339000 - 338461 - | 2-oxoglutarate oxidoreductase, gamma subunit THA_335 339749 - 338997 - | 2-oxoglutarate oxidoreductase, beta subunit vorB 340813 - 339755 - | 2-oxoglutarate oxidoreductase, alpha subunit THA_337 341048 - 340827 - | hypothetical protein THA_338 341706 - 341062 - | hypothetical protein THA_339 342790 - 341699 - | buk butyrate kinase TERM 379 342136 - 342150 + g 77 -8.6 -3.55761 | overlap 342133 TCAATTGAGTCAGTG GAAGTG TAC CACTTC TTTCAGGAGTAAATG THA_340 343694 - 342783 - | phosphate acetyltransferase THA_341 344746 - 343691 - | buk butyrate kinase THA_342 345984 - 344749 - | aminotransferase, class I TERM 380 346039 - 346052 + r 76 -5.3 -5.055 | overlap 346020 346032 TTGCAATTTTTTGCA TGCAA AATT TTGCA TTTTTTAACAATTGA THA_343 346178 - 346017 - | hypothetical protein THA_344 346256 - 347398 + | soluble hydrogenase 42 kDa subunit serA 347398 - 348309 + | D-3-phosphoglycerate dehydrogenase TERM 381 348328 - 348358 + F 100 -14.1 -5.52384 | opp_overlap 348332, overlap 348332 CAAAAAGTATAAAAC AAAACCTCCACGC AATTA GCGTGGAGGTTTA TTTTTTTGGTGGAGC TERM 382 348332 - 348354 + F 100 -14.9 -5.23943 | opp_overlap 348332, overlap 348328 AAGTATAAAACAAAA CCTCCACGC AATTA GCGTGGAGG TTTATTTTTTTGGTG TERM 383 348354 - 348332 - f 100 -14.9 -5.22137 | opp_overlap 348332 348328 AAGTATAAAACAAAA CCTCCACGC AATTA GCGTGGAGG TTTATTTTTTTGGTG THA_347 348627 - 349838 + | M20/DapE family protein YgeY THA_348 349840 - 350829 + | ornithine carbamoyltransferase TERM 384 350998 - 350959 - g 83 -7.9 -4.64024 | opp_overlap 350965 350967, overlap 350963 350967 AAAGCAAAGAAGAAA TTAATGCAGCCGGGAAG GTTGTT CTTCCCGGCTTTATTGA CCCACATGTTCACTT TERM 385 350994 - 350963 - g 80 -8.7 -3.78475 | opp_overlap 350965 350967, overlap 350959 350967 CAAAGAAGAAATTAA TGCAGCCGGGAAG GTTGTT CTTCCCGGCTTTA TTGACCCACATGTTC TERM 386 350990 - 350967 - g 100 -13.9 -2.65949 | opp_overlap 350965 350967, overlap 350963 350959 GAAGAAATTAATGCA GCCGGGAAG GTTGTT CTTCCCGGC TTTATTGACCCACAT TERM 387 350967 - 350990 + G 100 -14.6 -4.15222 | opp_overlap 350967 350963 350959, overlap 350965 GAAGAAATTAATGCA GCCGGGAAGG TTGT TCTTCCCGGC TTTATTGACCCACAT TERM 388 351798 - 351784 - g 72 -2.8 -5.46706 | overlap 351785 351786 AGCGTAAAAGAAAAA CCGGAA ACC TTCCAA TGGGAATCGGCGGAA THA_349 350832 - 352127 + | D-hydantoinase, putative THA_350 352132 - 353415 + | protein SsnA THA_351 353435 - 354517 + | dihydroorotate dehydrogenase family protein TERM 389 354915 - 354952 + F 79 -3.3 -5.60689 | gap 1, overlap 354917 GCGCCTGACTGTGGA TCAGGTGG-TCGCGGGTT CAA ATCCCGCTAGCCACCCCA TTTTTTATTGTATAA THA_357 355114 - 355377 + | stage V sporulation protein S TERM 390 355392 - 355428 + T 100 -14.6 -4.9445 | opp_overlap 355400, overlap 355400 ACTGAATTTATAATA TGAAAAAAGCCCGGTC TTTTT GACCGGGCTTTTATTA TTTTTAATTGCTTAT TERM 391 355420 - 355400 - T 100 -14 -5.30189 | opp_overlap 355392 355400 TATAATATGAAAAAA GCCCGGTC TTTTT GACCGGGC TTTTATTATTTTTAA TERM 392 355400 - 355420 + T 100 -14 -5.16681 | opp_overlap 355400, overlap 355392 TATAATATGAAAAAA GCCCGGTC TTTTT GACCGGGC TTTTATTATTTTTAA THA_358 356993 - 355440 - | protein UshA TERM 393 355640 - 355652 + g 72 -6.3 -4.27584 | overlap 355647 355650 CTTTATATACCTTGT CCATT TCT AATGG TTTTCCATTAACCAT TERM 394 356154 - 356180 + g 84 -6.6 -5.29885 | overlap 356157 ATACACTTTTAGATT TACTGGAATTGG AGT CCAATTCCATTC TTTTATTTTTCCATT TERM 395 356157 - 356177 + g 100 -12.7 -4.70511 | overlap 356154 CACTTTTAGATTTAC TGGAATTGG AGT CCAATTCCA TTCTTTTATTTTTCC THA_359 358748 - 357021 - | ABC transporter, ATP-binding protein TERM 396 358466 - 358480 + g 79 -5.8 -5.11063 | opp_overlap 358466, overlap 358459 TATCAAGTGAAAGAA TTTTGT CGT ACAAAA TTTTTCTTGCCTCAT THA_360 361019 - 358755 - | hypothetical protein TERM 397 358827 - 358809 - G 81 -9.6 -3.54129 | opp_overlap 358809 358808 358811 TATATGCTTGTCAAA TAGTCCGC TAT GCGAACTA GTATTTCCGATAAAT TERM 398 360486 - 360452 - G 100 -11.6 -4.7261 | opp_overlap 360455, overlap 360455 ATTCATCAAAACAAA CAATCTTCCAGCTG TATTTAC CAGCTGGAAGATTT AACCTGTAAAAATTA TERM 399 360455 - 360483 + g 100 -13.3 -3.63627 | opp_overlap 360455 360452 CATCAAAACAAACAA TCTTCCAGCTG TATTTAC CAGCTGGAAGA TTTAACCTGTAAAAA TERM 400 360483 - 360455 - G 100 -13.3 -4.45807 | opp_overlap 360455, overlap 360452 CATCAAAACAAACAA TCTTCCAGCTG TATTTAC CAGCTGGAAGA TTTAACCTGTAAAAA THA_361 361643 - 361032 - | hypothetical protein THA_362 364031 - 361656 - | hypothetical protein TERM 401 363329 - 363301 - G 88 -7.7 -4.87807 | opp_overlap 363300 363307, overlap 363324 GCAACAGACCAAAAA TTTAAATCTGA ACTTTCA TCAGATTTAAA ATATCCTTTAAAGTT THA_363 364561 - 364031 - | hypothetical protein THA_364 365303 - 364542 - | 1-acyl-sn-glycerol-3-phosphate acetyltransferase thiI 366469 - 365300 - | thiamine biosynthesis/tRNA modification protein ThiI TERM 402 365388 - 365410 + g 72 -5 -4.731 | AATTTGCTTTCTATC TCTTCTAT TTCTTTT ATAGAAGA TTTTGTTGCTGGATT TERM 403 366634 - 366606 - H 86 -11.3 -2.85921 | overlap 366596 366603 366601 AAAAATAATATACTA TTATTGAAAATGA TAA TCATTCTCAATAA AAAAAACGGAGGTGC THA_366 366654 - 367430 + | iron permease FTR1 family TERM 404 367483 - 367450 - T 100 -14.1 -3.34369 | opp_overlap 367455, overlap 367455 AATCGATAAATAAAG TAAAATGGCTTTGGT AAAC ACCAAAGCCATTTTT TAATATAAACATCAC TERM 405 367455 - 367478 + T 100 -14 -5.21709 | opp_overlap 367450 367455 ATAAATAAAGTAAAA TGGCTTTGGT AAAC ACCAAAGCCA TTTTTTAATATAAAC TERM 406 367478 - 367455 - T 100 -14 -4.74219 | opp_overlap 367455, overlap 367450 ATAAATAAAGTAAAA TGGCTTTGGT AAAC ACCAAAGCCA TTTTTTAATATAAAC TERM 407 369526 - 369498 - T 73 -8.1 -3.37685 | overlap 369496 AAAACTTTGCAAAGA GATCGCCAGCATC TCC AAAGCTGGCAACC ACGACCCGTTTAGAA TERM 408 370728 - 370707 - T 100 -15.9 -6.11229 | opp_overlap 370707 ATGAAAACAAAAAAA GCGGTGGGT CAAA ACCCACCGC TTATTAAAAAGTTTA TERM 409 370707 - 370728 + T 100 -15.9 -3.64283 | opp_overlap 370707 ATGAAAACAAAAAAA GCGGTGGGT CAAA ACCCACCGC TTATTAAAAAGTTTA TERM 410 370988 - 371011 + T 75 -8.2 -3.64103 | overlap 370987 TATTCCATAGTCTTC CGATACTGTA TCGA TACTGTATCG TTTAGAATCTACCTA TERM 411 371929 - 371968 + T 100 -14.6 -5.77571 | gap 1, opp_overlap 371917 371932, overlap 371932 ATTTCTATTAAAAAT AAATGCTCCATTCTTG-CA CTA TGACAAGAATGGAGCATTC TTTTTGTTTTTTAAT TERM 412 371932 - 371965 + T 100 -16.3 -4.8855 | gap 1, opp_overlap 371932, overlap 371929 TCTATTAAAAATAAA TGCTCCATTCTTG-CA CTA TGACAAGAATGGAGCA TTCTTTTTGTTTTTT TERM 413 371965 - 371932 - T 100 -16.3 -4.91852 | gap 1, opp_overlap 371932 371929 TCTATTAAAAATAAA TGCTCCATTCTTG-CA CTA TGACAAGAATGGAGCA TTCTTTTTGTTTTTT THA_367 372207 - 372001 - | hypothetical protein THA_368 372408 - 372223 - | hypothetical protein THA_369 374664 - 372478 - | copper-translocating P-type ATPase THA_370 374949 - 374677 - | hypothetical protein TERM 414 375046 - 375022 - R 100 -17.3 -5.68438 | TTAGCAAATAAAAAA TGCCCTGAAAG TTT CTTTCAGGGCA CTTAAAAATGTAAGA THA_371 376925 - 375072 - | ABC-type multidrug/protein/lipid transport system, ATPase THA_372 378646 - 376922 - | ABC transporter ATP-binding protein THA_373 379082 - 378630 - | MarR-family transcriptional regulator TERM 415 379096 - 379113 + r 72 -5.7 -4.53303 | opp_overlap 379098, overlap 379096 ACTTTCCACCTCCAA TAGTTTT ACGT AAAACTA TTTTATATCAAACTA TERM 416 379168 - 379149 - R 100 -10.7 -5.4505 | TTTGTCAATAAAAAA GTGCCGG ATAATA CCGGCAC TAAAATGTAATAGCT THA_374 380405 - 379191 - | alcohol dehydrogenase TERM 417 380659 - 380669 + r 75 -2.6 -5.52986 | opp_overlap 380659 ATAATAAATGTAAAT TATA TTA TATA TTTTTTTGATAGAAT THA_375 381578 - 380757 - | integrase, catalytic region, putative TERM 418 381422 - 381432 + g 72 -6.8 -4.11472 | overlap 381421 AGATGCGTCTATATC CCCA ATA TGGG TGTTTTTGCTTTAGC THA_376 382181 - 382053 - | hypothetical protein THA_377 382514 - 382780 + | hypothetical protein TERM 419 382877 - 382915 + T 100 -13.4 -3.51365 | opp_overlap 382882 382911, overlap 382882 AAAGAAATATATTGA AAAAACTCTTCTTGGC ACTGATA GCCAAGAAGAGTTTTA TTATATAAAATATAC TERM 420 382910 - 382882 - T 100 -13.3 -5.15381 | opp_overlap 382882 382877 AATATATTGAAAAAA CTCTTCTTGGC ACTGATA GCCAAGAAGAG TTTTATTATATAAAA TERM 421 382882 - 382910 + T 100 -13.3 -4.84311 | opp_overlap 382882, overlap 382877 AATATATTGAAAAAA CTCTTCTTGGC ACTGATA GCCAAGAAGAG TTTTATTATATAAAA TERM 422 384100 - 384068 - T 86 -10 -3.7278 | opp_overlap 384073, overlap 384073 TTATAAAATTAAATA CAAAAGAGCTGGAA ATAAA CTCCAGCTCTTTTT AAAAATCAAAATTTT TERM 423 384073 - 384095 + T 90 -9.2 -4.59773 | opp_overlap 384068 384073 AAATTAAATACAAAA GAGCTGGA AATAAAC TCCAGCTC TTTTTAAAAATCAAA TERM 424 384095 - 384073 - T 100 -9.9 -4.85894 | opp_overlap 384073, overlap 384068 AAATTAAATACAAAA GAGCTGGAA ATAAA CTCCAGCTC TTTTTAAAAATCAAA THA_379 384434 - 384132 - | hypothetical protein THA_380 386155 - 384437 - | oligoendopeptidase F TERM 425 384809 - 384826 + gr 70 -7.1 -3.61715 | opp_overlap 384823 TTTTGCCGTGTGCTC TGGATTT GTAT AAATCCA TTGTTGGAAAGCATC TERM 426 385352 - 385365 + gr 74 -6.7 -4.29953 | TACACTTTCAATACC GAGCT TTTC AGCTC TTCTTTTCATCCTTT TERM 427 385926 - 385941 + gr 71 -7.6 -3.53933 | overlap 385914 TTCTCTGAATACTCA GGTTTG TCTG CAAACC TTGTCATATTAATAT THA_381 387533 - 386130 - | damage-inducible protein TERM 428 386325 - 386301 - G 74 -2.1 -5.60993 | overlap 386302 CTTTGTAGAAAAAAA TGCAACTAGAG GTA CTCTAATTCCC CATAACCTTGTTATA TERM 429 388138 - 388118 - g 82 -6.9 -4.86621 | overlap 388120 ATCTTGAACTAAAAA TACTTGCTA TTA CAGCAAGCA ACGACGGTCTTGTTA TERM 430 388136 - 388120 - g 75 -7.3 -4.05402 | overlap 388118 CTTGAACTAAAAATA CTTGCTA TTA CAGCAAG CAACGACGGTCTTGT THA_382 387634 - 388356 + | hypothetical protein THA_383 388393 - 389355 + | K+ channel, beta subunit TERM 431 389566 - 389551 - g 72 -5.4 -4.72333 | AACCAGACTTAAAAA TGCACC AATT GATGCA TTAAAAGAATTTCCA THA_384 389357 - 390553 + | aminopeptidase 2 TERM 432 390561 - 390586 + T 100 -13.4 -5.83211 | TAATATAACTGTACA GGCCTCATCA TATATT TGATGAGGCC TTTTTTCTTTTAATA THA_385 391623 - 390568 - | ABC-2 type transporter family TERM 433 390821 - 390796 - G 70 -5.7 -4.32857 | gap 1 TCCTGCAAACATAAA TACTTG-AAATA AAA TATTTCCAAGTA CTACAATCGTCTCCG THA_386 392482 - 391625 - | ABC transporter, ATP-binding protein THA_387 393475 - 392483 - | ABC-2 type transporter superfamily THA_388 394033 - 393488 - | appr-1-p processing domain protein THA_389 395252 - 394020 - | ATPase, AAA family TERM 434 395084 - 395098 + gr 70 -5 -4.57073 | opp_overlap 395084 TGTTCAGTTTGATAA CTTCTA GTG TGGAAG TTTTTCCACAACCTG THA_390 396153 - 395221 - | nucleoside-diphosphate-sugar epimerase TERM 435 395829 - 395845 + gr 72 -3.7 -5.14563 | overlap 395830 AAATAAACTTTTTTA CTCCATA TTT TATGGAA TTTTTTAATAACACA TERM 436 395830 - 395844 + gr 70 -7.2 -3.68256 | overlap 395829 AATAAACTTTTTTAC TCCATA TTT TATGGA ATTTTTTAATAACAC THA_391 396657 - 396154 - | manganese-dependent transcription regulator THA_392 397249 - 396650 - | uracil-DNA glycosylase TERM 437 399240 - 399216 - g 76 -7.9 -3.89937 | overlap 399214 ACTAAAGAACAAAGA GAAGCAGCTCT TGC AGAACTTCTTC CACTTCAAAAAGAAG ppdK 397437 - 400082 + | pyruvate, phosphate dikinase TERM 438 400119 - 400099 - f 77 -8.2 -3.93664 | opp_overlap 400101, overlap 400101 ACTTAACATATTAAA TAGGGCCC TTTTT GGGCCCTT TCTTATTCGGAGGTG TERM 439 400101 - 400117 + F 100 -10.8 -4.44667 | opp_overlap 400099 400101 TTAACATATTAAATA GGGCCC TTTTT GGGCCC TTTCTTATTCGGAGG TERM 440 400117 - 400101 - f 87 -10.8 -3.55205 | opp_overlap 400101, overlap 400099 TTAACATATTAAATA GGGCCC TTTTT GGGCCC TTTCTTATTCGGAGG THA_394 400140 - 400550 + | hypothetical membrane spanning protein TERM 441 400908 - 400893 - g 72 -6.2 -4.23853 | AAGAACACATAGAAA GTAACA GTGA TGTTAC CATATTAACTGCTAT glmU 400547 - 401902 + | UDP-N-acetylglucosamine pyrophosphorylase THA_396 401883 - 402833 + | ribose-phosphate pyrophosphokinase THA_397 402869 - 403522 + | ribosomal protein L25, Ctc-form TERM 442 403555 - 403589 + F 100 -22.4 -4.46072 | opp_overlap 403551 403550 GCCTTGGAAATCCTG GTCCACGTTATGCCTT CAC AAGGCATAACGTGGGC TTTATGTTTATTGAC THA_398 403593 - 404072 + | peptidyl-tRNA hydrolase TERM 443 404155 - 404142 - g 70 -5.3 -4.56775 | ACTTTGTTCCAAAAA GCATA TCTA TATGC AAAAAATGCCTTAAA THA_399 404069 - 404506 + | hypothetical protein THA_400 404807 - 406129 + | ABC transporter, permease protein TERM 444 406716 - 406699 - g 70 -8.5 -3.19202 | overlap 406697 406695 AAAGATATTAATATA GTTCCAA AAAG TTGGAAC TTAAAAACCGTTGAG THA_401 406150 - 407373 + | hypothetical protein TERM 445 407454 - 407489 + G 100 -9.1 -4.62302 | opp_overlap 407455 407456, overlap 407456 AATATTTTATTGAAA AGTCTCTTCCCTCAA TTGTAC TTGAGGGGAGAGATA TTTTTAAAAATGTTA TERM 446 407488 - 407455 - g 81 -8.2 -4.19258 | opp_overlap 407454 407456, overlap 407456 ATATTTTATTGAAAA GTCTCTTCCCTCAA TTGTAC TTGAGGGGAGAGAT ATTTTTAAAAATGTT TERM 447 407487 - 407456 - g 93 -11.7 -3.11073 | opp_overlap 407454 407456, overlap 407455 TATTTTATTGAAAAG TCTCTTCCCTCAA TTGTAC TTGAGGGGAGAGA TATTTTTAAAAATGT TERM 448 407456 - 407487 + G 100 -13.9 -3.91908 | opp_overlap 407456 407455, overlap 407454 TATTTTATTGAAAAG TCTCTTCCCTCAA TTGTAC TTGAGGGGAGAGA TATTTTTAAAAATGT TERM 449 407536 - 407548 + G 78 -3.4 -5.54907 | GAGAATAAAAATTCT TGCA AATAC TGCA TTTTTATTTTCTAAG TERM 450 407703 - 407689 - g 81 -2.8 -5.80727 | AAAAATAAGAAAAAA GAGGAT AAA ATCATC AGATTACTTTCAACT THA_402 407366 - 407845 + | adenylylsulfate kinase TERM 451 408823 - 408813 - g 81 -2.6 -5.73672 | AAAGAATCAAAAAAA TATT AAA AATA TATGGCGGCGATCTA TERM 452 409940 - 409959 + G 71 -7.8 -3.40403 | opp_overlap 409928 TTATTTGCAATGACT CCACTTGC AAAG GCAAGAGG TTATACTCCAGGCAG uvrA 407849 - 410623 + | excinuclease ABC, A subunit THA_404 410616 - 411467 + | site-specific recombinase XerD TERM 453 411470 - 411496 + T 79 -7.2 -4.3665 | opp_overlap 411475, overlap 411475 TAAAAAGTTGTAAAA GAAAAGCCCCCG TTT TGGGGGCTTTAG TTTATGTTTCCCTTA TERM 454 411475 - 411491 + T 100 -11.5 -4.23732 | opp_overlap 411475, overlap 411470 AGTTGTAAAAGAAAA GCCCCCG TTT TGGGGGC TTTAGTTTATGTTTC TERM 455 411491 - 411475 - T 100 -10.8 -5.08255 | opp_overlap 411470 411475 AGTTGTAAAAGAAAA GCCCCC GTTTT GGGGGC TTTAGTTTATGTTTC THA_405 412798 - 411509 - | eno phosphopyruvate hydratase TERM 456 412906 - 412939 + r 100 -13.9 -4.99435 | opp_overlap 412892 412909, overlap 412909 ATAACATTAATAAAT AAAGCATGGCTCCGC GGAT GCGAAGCCATGCTTA TTTTTAATTGTTAAA TERM 457 412936 - 412909 - R 100 -17.8 -4.71791 | opp_overlap 412906 412909, overlap 412892 ACATTAATAAATAAA GCATGGCTCCGC GGAT GCGAAGCCATGC TTATTTTTAATTGTT TERM 458 412909 - 412936 + r 100 -15.6 -4.57543 | opp_overlap 412909 412892, overlap 412906 ACATTAATAAATAAA GCATGGCTCCGC GGAT GCGAAGCCATGC TTATTTTTAATTGTT THA_406 413860 - 412967 - | hypothetical protein THA_407 414941 - 413913 - | outer membrane protein, putative TERM 459 414623 - 414633 + g 72 -6.8 -4.12296 | opp_overlap 414623 CTGATTTTGCCATAA GAGC TAC GCTC TTCTTTAATTGTCCA tyrS 416238 - 415042 - | tyrosyl-tRNA synthetase TERM 460 415316 - 415326 + g 89 -6.8 -5.40464 | ACAAAGTTTTCTTCC GCCA TTC TGGC TTTTTCTTTGTCGTA TERM 461 416048 - 416020 - G 77 -8.4 -3.81689 | gap 1, opp_overlap 416019 416016 AATACGAGCAGTAAA GTCACCA-ATAAT CAAT ATTATGTGGTGAC CTAATTCTTGAAATT TERM 462 416056 - 416070 + g 71 -2.2 -5.40072 | opp_overlap 416062 GTGGTGACCTAATTC TTGAAA TTG TTTTAA TTTTTTTAACACAAC THA_409 416493 - 416329 - | preprotein translocase, SecG subunit THA_410 418333 - 416555 - | Fe-S oxidoreductase family 2 TERM 463 416988 - 417006 + g 74 -9 -3.36313 | GTGTATTCTGGAAGT TGCAATTT TGC AAATTGCA TTGGTGTATGTGGTT TERM 464 417193 - 417215 + g 79 -5.1 -5.19251 | CTTTTTTAGCACTGT TATAAATTT CTTCA AAATTTATA TTTTTATTAATCTTA TERM 465 417307 - 417354 + g 70 -3.6 -5.13343 | opp_overlap 417307 417320, overlap 417309 CAATCTTCGACATAA TCTCAATATTTAATGCATCAAC ACGT GTTGATGGAATAGATATAGAAA TTTTATTTTCAATTG TERM 466 417906 - 417895 - G 70 -5.8 -4.20749 | CAATATTGTAAGAAA CAGG CCCA CCTG CAACAACTATTGGAT THA_411 419381 - 418347 - | methyltransferase THA_412 419695 - 419378 - | hypothetical protein TERM 467 419546 - 419535 - G 88 -4.4 -5.66989 | GAAATACTAAAAAAA TCAC TTCT GTGA ATATGCCTCTTTTTA THA_413 420069 - 419692 - | CrcB protein TERM 468 419975 - 419958 - G 100 -9.9 -4.89852 | CTACATTTACAAAAA TTGTCCC CCAA GGGACAA AACTAAATGAAAAAG THA_414 420568 - 420083 - | hypothetical protein TERM 469 420187 - 420216 + g 83 -9.6 -3.68988 | opp_overlap 420210 TTTTTATATAGTTTG TTTTATCTTTGT AAATAA ACAAAGATAAAA TTGTCTTACCTGAAA rdgB 421143 - 420565 - | non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family TERM 470 420706 - 420694 - G 70 -6.3 -4.09117 | TTCAGGTATAAAGAA TGGAT CAT ATCCA AATCCAAACTCACCT THA_416 421611 - 421153 - | hypothetical protein TERM 471 421372 - 421339 - G 78 -9.2 -3.29043 | opp_overlap 421341, overlap 421341 AAGCTCTCCCGATAA CATTTCATTTTCAA CGAATT TTGAAAATGAAATA CTATCCATCTGTTTT TERM 472 421370 - 421341 - G 78 -9.6 -3.21276 | opp_overlap 421341, overlap 421339 GCTCTCCCGATAACA TTTCATTTTCAA CGAATT TTGAAAATGAAA TACTATCCATCTGTT TERM 473 421341 - 421370 + g 76 -9.6 -2.66559 | opp_overlap 421339 421341 GCTCTCCCGATAACA TTTCATTTTCAA CGAATT TTGAAAATGAAA TACTATCCATCTGTT TERM 474 421572 - 421518 - G 70 -8.4 -3.13601 | gap 1, opp_overlap 421520, overlap 421520 421554 TAAACGTAACAGATA GATTTGCAAAACGCTTT-AATTTTT TTAAAT AAAAATCAAAAACGTTTTGCAAATG ACTTGAAAGCTTTCC TERM 475 421570 - 421520 - G 85 -11 -3.11609 | gap 1, opp_overlap 421520, overlap 421518 421554 AACGTAACAGATAGA TTTGCAAAACGCTTT-AATTTTT TTAAAT AAAAATCAAAAACGTTTTGCAAA TGACTTGAAAGCTTT THA_417 422138 - 421608 - | hypothetical protein prmA 422893 - 422111 - | ribosomal protein L11 methyltransferase THA_419 423717 - 422896 - | LysM domain/M23/M37 peptidase domain protein TERM 476 423411 - 423401 - GH 76 -5.4 -5.10033 | opp_overlap 423401 CCAACATAAATAAAA CTAC TAA GTAG ATTGTTAGCCTTTTT TERM 477 423839 - 423820 - gH 82 -5 -5.48825 | TATTAGTTAAAAAAA GCACATTC GAAA AAATGCGC AAAAAAACAGTTGAA THA_420 423696 - 423857 + | hypothetical protein THA_421 423967 - 424350 + | beta-alanyl-CoA:ammonia lyase 2 THA_422 424355 - 425173 + | hypothetical protein TERM 478 425242 - 425232 - g 70 -5.4 -4.53034 | opp_overlap 425223 GTGATAGAACCAAAA GGTA CTT TACC ACAGGCAGCAAAAAA TERM 479 425907 - 425890 - g 70 -8.5 -3.09834 | TAGCTCATGATGTAA TTGTTGC AGAT GCAACAA AACCTGTAGAAGTTT TERM 480 426087 - 426073 - g 75 -10 -2.55216 | overlap 426072 CATCATTTACAAGAG CTGCAC TTG GTGCAG AAGGCGTTGGAAAAG THA_423 425178 - 426215 + | alcohol dehydrogenase, zinc-binding TERM 481 426259 - 426247 - g 70 -6.3 -4.05902 | GAAATTATAAGGAAA TTCCA CTT TGGAA AAACGTTAGCGAAGA THA_424 426228 - 427499 + | L-lysine 2,3-aminomutase TERM 482 427833 - 427819 - g 75 -4.2 -5.2291 | AGATGATAATAAAAA GAGAGC AAA GCTTTC AACAAATATATACAA THA_425 427496 - 427906 + | MaoC family protein THA_426 427903 - 428874 + | hypothetical protein TERM 483 429361 - 429345 - g 70 -8.1 -3.08002 | overlap 429342 GATGAAAGCAAATTA CTTGAAA TCC TTTCAAG AGAAAAAGAAATTGA TERM 484 429574 - 429552 - g 70 -4.3 -4.88711 | gap 1, opp_overlap 429553, overlap 429553 429555 ATAATATATGAAAAA TTATTCAACC CTGA GGTTGAA-AA TTTATTAAATGAGCG TERM 485 429553 - 429574 + G 70 -5.9 -4.20516 | opp_overlap 429552 429553 429555 TAATATATGAAAAAT TATTCAACC CTGA GGTTGAAAA TTTATTAAATGAGCG TERM 486 429572 - 429555 - g 72 -8.5 -3.31261 | opp_overlap 429553, overlap 429552 429553 ATATATGAAAAATTA TTCAACC CTGA GGTTGAA AATTTATTAAATGAG THA_427 428871 - 430232 + | DNA mismatch repair protein MutS THA_428 430210 - 431766 + | D-lysine 5,6-aminomutase alpha subunit THA_429 431769 - 432554 + | D-lysine 5,6-aminomutase beta subunit THA_430 432551 - 432847 + | lipoprotein, putative TERM 487 432848 - 432870 + T 100 -16.4 -4.26871 | GCACTTGAATTTTAA GCCCTATGGA AAT TCCATAGGGC TTTATTCATACCTTA THA_431 434053 - 432872 - | macrolide export ATP-binding/permease protein MacB TERM 488 433386 - 433405 + g 71 -8 -3.53745 | overlap 433382 TCTACCACTTCGCTA TTTTTTGC CTTA GCAAAAAA TTGATTTACAGTATC THA_432 434733 - 434050 - | ABC-type transport systems, involved in lipoprotein release, ATPase component THA_433 435769 - 434750 - | efflux transporter, RND family, MFP subunit THA_434 437100 - 435766 - | hypothetical protein TERM 489 435944 - 435962 + g 72 -4.7 -4.93812 | TTTTCAAACTTTTCT TTAACTT TTTCC AAGTTAA TTTCTTTTATCTTTT TERM 490 436659 - 436647 - G 70 -6.3 -4.18197 | opp_overlap 436640 436637 436647 ATTTTGCATTTAAAA GAGAA ATT TTCTC TTCTAAATCCTCTTC THA_435 438110 - 437103 - | hypothetical protein TERM 491 438191 - 438216 + r 71 -7.5 -3.54475 | opp_overlap 438192, overlap 438192 438194 438207 ATAAAAAATAAAAAA AGAGAGCAGAC TACT GCCTGCTCTCC TTGTCTGGTAGCGGG TERM 492 438192 - 438215 + r 82 -11 -2.72471 | opp_overlap 438192, overlap 438191 438194 438207 TAAAAAATAAAAAAA GAGAGCAGAC TACT GCCTGCTCTC CTTGTCTGGTAGCGG TERM 493 438215 - 438192 - R 100 -13.2 -6.28401 | opp_overlap 438192 438191 438194 438207 TAAAAAATAAAAAAA GAGAGCAGAC TACT GCCTGCTCTC CTTGTCTGGTAGCGG THA_438 439877 - 438495 - | radical SAM TERM 494 439613 - 439591 - G 70 -5 -4.67038 | GGTTCAAAATGAAAA GAAAATAAAA AAA CCTTATTTTC ATCTAGTGGAGTAAA TERM 495 439792 - 439766 - G 89 -8.9 -4.60889 | gap 1, opp_overlap 439763 439766 439769 439770, overlap 439770 AATTATTCGGAAAAA TTAA-GGCAACC CCAC GGTTGCCATTAA TACTGTTTAATCTTA TERM 496 439766 - 439792 + g 72 -8.9 -2.9003 | gap 1, opp_overlap 439766 439770, overlap 439763 439769 439770 AATTATTCGGAAAAA TTAA-GGCAACC CCAC GGTTGCCATTAA TACTGTTTAATCTTA TERM 497 439787 - 439770 - G 95 -11.3 -3.81256 | opp_overlap 439769 439766 439763 439770, overlap 439766 ATTCGGAAAAATTAA GGCAACC CCAC GGTTGCC ATTAATACTGTTTAA TERM 498 439770 - 439787 + g 85 -11.3 -2.5789 | opp_overlap 439770 439766, overlap 439769 439766 439763 ATTCGGAAAAATTAA GGCAACC CCAC GGTTGCC ATTAATACTGTTTAA THA_439 440256 - 439861 - | hypothetical protein THA_440 442075 - 440219 - | putative Cell division protease FtsH-like protein THA_441 443355 - 442072 - | tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase) (tRNA(Ile)-2-lysyl-cytidine synthase) TERM 499 442774 - 442786 + g 71 -4.9 -4.77173 | AAAATTCCTTGTATA TTTTG TAT CAAAA TTTGTTTTATCAACC THA_442 443434 - 444438 + | endoglucanase M TERM 500 444645 - 444611 - g 100 -14.6 -4.59982 | opp_overlap 444611 444616, overlap 444616 TTAGAATTAAATAAA GAAAATTCTGGAAG TGAAAAG CTTCCAGAATTTTC TTTGCCTTCAACTGA TERM 501 444611 - 444645 + G 100 -15.3 -3.76125 | opp_overlap 444611 444616, overlap 444616 TTAGAATTAAATAAA GAAAATTCTGGAAGT GAAAA GCTTCCAGAATTTTC TTTGCCTTCAACTGA TERM 502 444616 - 444640 + G 100 -9.4 -4.94058 | opp_overlap 444616 444611, overlap 444611 ATTAAATAAAGAAAA TTCTGGAAGT GAAAA GCTTCCAGAA TTTTCTTTGCCTTCA TERM 503 444640 - 444616 - g 100 -8.7 -5.20222 | opp_overlap 444611 444616, overlap 444611 ATTAAATAAAGAAAA TTCTGGAAG TGAAAAG CTTCCAGAA TTTTCTTTGCCTTCA TERM 504 445056 - 445008 - g 75 -4.8 -5.10765 | gap 1, opp_overlap 445053, overlap 445009 AAAGAAATAACAAAA CTTTCTATACCCTATGTCTTGGA GCGT TCCCAGACATAGA-TACAGCAAA AGAATATTTTAATTC THA_443 444515 - 445141 + | hypothetical protein TERM 505 445873 - 445883 + G 86 -5.4 -5.626 | opp_overlap 445873 TACTGTATTTTAATA GCTA TTA TAGC TTTTTTTGTGGGGTG THA_444 445153 - 445899 + | undecaprenyl-diphosphatase hutI 445905 - 447101 + | imidazolonepropionase THA_446 447088 - 447435 + | hypothetical protein THA_447 447468 - 447932 + | heptaprenyl diphosphate synthase component I THA_448 447892 - 448467 + | maf septum formation protein Maf TERM 506 448568 - 448548 - gf 72 -8.5 -3.06073 | opp_overlap 448547 448548, overlap 448547 TAGATGTTTTAAAAC TTTCAAAAA ACC TTTTTGAAA CTTTTGACAAGAGCT TERM 507 448548 - 448568 + GF 72 -8.5 -3.04517 | opp_overlap 448548 448547, overlap 448547 TAGATGTTTTAAAAC TTTCAAAAA ACC TTTTTGAAA CTTTTGACAAGAGCT TERM 508 448728 - 448709 - gf 74 -5.8 -4.67943 | TTGGAAGATAGAAAA GGAAAATT TCTA AATTCTCC AGAGCTTATATACGA THA_449 448439 - 449080 + | DNA repair protein TERM 509 449079 - 449063 - f 75 -8.1 -3.59262 | TTTTATAGCTTTAAA CACAATA AAC TATTGTG AGGTGTAAGTGCATG THA_450 449092 - 450273 + | hypothetical protein TERM 510 450626 - 450596 - g 79 -8.4 -3.94465 | overlap 450588 CTCAAAAGTAAAAGA TCCTTCTACCAA TTTTTTC TTGGTAGATGGA AAGCCTACTTTTGAT THA_451 450267 - 451682 + | hypothetical protein THA_452 451699 - 452838 + | hyaluronan synthase related, putative THA_453 452849 - 453595 + | glycosyl transferase, putative TERM 511 453697 - 453729 + G 76 -5.1 -5.12707 | overlap 453717 453718 AAAACATCTTATTGA GTATTTTTTCCAA GCTATCA TTTGAAAAAATAC TTTTTTCAACTTTAC THA_454 453585 - 454592 + | hypothetical protein THA_455 456915 - 454594 - | hypothetical protein TERM 512 455434 - 455420 - G 77 -5.8 -4.95957 | GAAAGTAATGAAAAA GTATTT GAA AAATAC TTAGAATTTTCTATC THA_456 457314 - 456916 - | hypothetical protein TERM 513 456976 - 456994 + g 76 -9 -3.49924 | opp_overlap 456973 TAAGGTTATATATTT TCTTGAAT CAT ATTCAAGA TTATAATAGTTTGAA THA_457 457831 - 457304 - | hypothetical protein TERM 514 457751 - 457716 - G 85 -4.8 -5.50723 | opp_overlap 457719 457721, overlap 457719 457720 457721 TTAGTAAAATAAAAA TAAGGTGGAGATTGTA TCTC TACAATCTCCATATTT TTCTGATATACAAAT TERM 515 457719 - 457748 + g 93 -8.7 -4.95155 | opp_overlap 457719 457716 457720 457721, overlap 457721 GTAAAATAAAAATAA GGTGGAGATTGTA TCTC TACAATCTCCATA TTTTTCTGATATACA TERM 516 457748 - 457719 - G 78 -6.5 -4.80077 | opp_overlap 457719 457721, overlap 457716 457720 457721 GTAAAATAAAAATAA GGTGGAGATTGTA TCTC TACAATCTCCATA TTTTTCTGATATACA TERM 517 457747 - 457720 - G 81 -10 -3.45606 | opp_overlap 457719 457721, overlap 457719 457716 457721 TAAAATAAAAATAAG GTGGAGATTGTA TCTC TACAATCTCCAT ATTTTTCTGATATAC TERM 518 457721 - 457746 + g 100 -13.5 -4.09649 | opp_overlap 457720 457719 457716 457721, overlap 457719 AAAATAAAAATAAGG TGGAGATTGTA TCTC TACAATCTCCA TATTTTTCTGATATA TERM 519 457746 - 457721 - G 100 -13.5 -2.64923 | opp_overlap 457721 457719, overlap 457720 457719 457716 AAAATAAAAATAAGG TGGAGATTGTA TCTC TACAATCTCCA TATTTTTCTGATATA THA_458 459039 - 457828 - | tail-specific protease TERM 520 457931 - 457947 + g 71 -6.6 -3.97511 | ACTTCTTCTTCATGA GCAACA TTATC TGTTGC TTCTTGTGTTACATA THA_459 459822 - 459052 - | tRNA (adenine-N(1)-)-methyltransferase catalytic subunit TRM61 THA_460 460282 - 459836 - | hypothetical protein TERM 521 460280 - 460262 - G 82 -9 -3.87584 | AAGTATAACTAACAA GAAAAAGT ATA ACTTTTTC ATAAAATCATCCCCC THA_461 460967 - 460287 - | hypothetical protein THA_462 461548 - 460964 - | hypothetical protein THA_463 461823 - 461545 - | hypothetical protein hslV 462355 - 461825 - | heat shock protein HslV THA_465 463365 - 462352 - | universally conserved protein THA_466 464212 - 463340 - | phospholipase D active site motif domain protein lepA 466010 - 464199 - | GTP-binding protein LepA murD 467278 - 466007 - | UDP-N-acetylmuramoylalanine--D-glutamate ligase trmF 468585 - 467296 - | O tRNA:M(5)U-54 methyltransferase THA_470 469489 - 468575 - | fmt methionyl-tRNA formyltransferase TERM 522 469529 - 469513 - R 100 -8 -5.4505 | opp_overlap 469507 469513 TCCTTCAATAAAAAA GGATGC TATTT GCATCC TTTATATTTTTCAAA TERM 523 469513 - 469529 + r 85 -8 -4.55887 | opp_overlap 469513, overlap 469507 TCCTTCAATAAAAAA GGATGC TATTT GCATCC TTTATATTTTTCAAA ksgA 470303 - 469518 - | dimethyladenosine transferase THA_472 470905 - 470300 - | hypothetical protein TERM 524 470562 - 470544 - G 75 -4.7 -5.07652 | overlap 470560 TGTGCCAAAATAAAA TTGTTAT CAAGT ATAACAA ACTTTCCACCTGAAA THA_473 471917 - 470919 - | 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase family protein, putative TERM 525 471346 - 471362 + g 100 -12.3 -3.09671 | opp_overlap 471349 CGATCTTTTTTTATA GGATGGG TAT CCCATCC TATTCCACTTGCAAT THA_474 472919 - 471930 - | hypothetical protein glgC 474170 - 472932 - | glucose-1-phosphate adenylyltransferase TERM 526 473309 - 473335 + g 100 -9.5 -4.44046 | AATTTTTAACTTTTG TGCTATCTGCT ATGTA AGCAGGTGGCA TTTCTTTAGAATGAG glgD 475297 - 474182 - | glucose-1-phosphate adenylyltransferase, GlgD subunit deoC 476024 - 475302 - | deoxyribose-phosphate aldolase smpB 476489 - 476040 - | SsrA-binding protein gatC 476780 - 476499 - | glutamyl-tRNA(Gln) amidotransferase, C subunit csrA 477020 - 476799 - | carbon storage regulator THA_481 477468 - 477031 - | transmembrane protein THA_482 478243 - 477473 - | lysophospholipase THA_483 478647 - 478240 - | positive regulator of sigma(E), RseC/MucC superfamily THA_484 480270 - 478657 - | DAK2 domain protein TERM 527 478990 - 479010 + g 70 -4.1 -4.91459 | AACTTCTAAAATTGC TTCTTTGAA AAC TTCAAACAA TTTTTCTGGCTCTTC TERM 528 479530 - 479555 + g 71 -7.7 -3.46219 | overlap 479529 CCTTAATTCCTCTTC CTTATCAGACT CCAA AGTCTCATAAG ATTTTATTATCAACT THA_485 480616 - 480287 - | alkaline shock protein THA_486 482432 - 480591 - | dxs 1-deoxy-D-xylulose-5-phosphate synthase TERM 529 481346 - 481375 + gr 70 -7.3 -3.62597 | gap 1, opp_overlap 481336 481356, overlap 481351 481356 CCAAAGTGGACATTC CTCCAGCAAATGTG ACG CACATTTGCTC-AG TTATTCCAAGATCAA TERM 530 481351 - 481371 + gr 100 -12.7 -2.6563 | opp_overlap 481356, overlap 481346 481356 GTGGACATTCCTCCA GCAAATGTG ACG CACATTTGC TCAGTTATTCCAAGA TERM 531 482189 - 482172 - GR 74 -7.1 -3.89412 | ACTTAAACCATTAAA TTTTCGA ATAG TCGAAAA TAAATCCCATCTTCC serS 483741 - 482461 - | seryl-tRNA synthetase mtnA 484787 - 483747 - | methylthioribose-1-phosphate isomerase TERM 532 484953 - 484934 - H 73 -7.9 -3.67 | overlap 484932 TCAAGGCTCAAAATA GGAGTCA TTTGTT TGACTCC AAAAAAGAAAGGGAG THA_489 484977 - 486287 + | alkaline phosphatase 3 TERM 533 486310 - 486343 + T 100 -11.2 -5.1615 | opp_overlap 486310 ACATTTGGTAAAAAA TAACCCCCAAGA ATTTTAATCA TCTTGGGGGTTA TTTTTTAGATATTAA TERM 534 486343 - 486310 - T 100 -11.2 -5.02476 | opp_overlap 486310 ACATTTGGTAAAAAA TAACCCCCAAGA ATTTTAATCA TCTTGGGGGTTA TTTTTTAGATATTAA THA_490 487356 - 486355 - | basic membrane protein, putative TERM 535 486586 - 486601 + g 83 -9 -4.18421 | opp_overlap 486586 TATTGGCCCCAACAA TGCACC TTGA GGTGCA TTCTTTATATAGTTC TERM 536 486601 - 486586 - G 77 -9 -3.61715 | opp_overlap 486586 TATTGGCCCCAACAA TGCACC TTGA GGTGCA TTCTTTATATAGTTC leuS 489846 - 487369 - | leucyl-tRNA synthetase TERM 537 488244 - 488220 - G 70 -5 -4.66938 | ATCTTGAATATAAAA GGTGCAAAAC CGCGT GTTCCACACC ACCTATGTATTGATC TERM 538 488818 - 488804 - G 75 -7.2 -4.07885 | opp_overlap 488804 TATTTTTTTGCAAAA TCAAAG TCT CTTTGA TCGTGTGCAGGCACT THA_492 489944 - 490624 + | hypothetical protein THA_493 490637 - 490990 + | hypothetical protein TERM 539 491021 - 491057 + T 100 -11.1 -5.74288 | opp_overlap 491020 491019 CCAACTGTAAATATC CCCAGTTTCTAGT AAGTAAATTGA ACTAGAAACTGGG TTTTTTATTATTTAT TERM 540 493482 - 493532 + T 100 -14.5 -5.52347 | gap 1, opp_overlap 493492 493496, overlap 493457 493492 493529 AAAATTTTTTTAAGT TTTATTATAACAAATGGCTTCAGA CATC TCCGAAGCCATTTGTTG-AATAAA TTTTTTACTTTTATT TERM 541 493492 - 493523 + T 100 -14.6 -3.14863 | opp_overlap 493492 493496, overlap 493482 TAAGTTTTATTATAA CAAATGGCTTCAGA CATC TCCGAAGCCATTTG TTGAATAAATTTTTT TERM 542 493523 - 493492 - T 100 -16.8 -3.41527 | opp_overlap 493492 493482, overlap 493496 TAAGTTTTATTATAA CAAATGGCTTCAGA CATC TCCGAAGCCATTTG TTGAATAAATTTTTT TERM 543 493519 - 493496 - T 100 -11.8 -4.35483 | opp_overlap 493492 493482, overlap 493492 TTTTATTATAACAAA TGGCTTCAGA CATC TCCGAAGCCA TTTGTTGAATAAATT THA_495 494503 - 493682 - | integrase, catalytic region, putative TERM 544 494347 - 494357 + g 72 -6.8 -4.11472 | overlap 494346 AGATGCGTCTATATC CCCA ATA TGGG TGTTTTTGCTTTAGC TERM 545 495352 - 495342 - g 89 -4 -5.95286 | opp_overlap 495348, overlap 495348 ACCAAAAACAAAAAA TGAA TAT TTCA AAGAAATTATAATGG THA_496 494920 - 495396 + | RNA polymerase beta'' chain, putative THA_497 495383 - 496348 + | MoxR protein THA_498 496320 - 496964 + | hypothetical protein TERM 546 497477 - 497467 - g 72 -6.8 -4.11472 | overlap 497465 GCTAAAGCAAAAACA CCCA TAT TGGG GATATAGACGCATCT THA_499 497321 - 498142 + | integrase, catalytic region, putative TERM 547 498175 - 498187 + T 72 -3.5 -5.20534 | opp_overlap 498175 GGGGTGCATTACATA TTTTT GCC AAAAA TTTTTATTAATTAAT TERM 548 498612 - 498576 - T 74 -9.7 -2.72477 | opp_overlap 498576 498581 498588, overlap 498581 498585 TATAGAATTATAGCA CAAAACAAATAATGTTA CAA TAACATTTTTTGTTTAG TAACTTTTTGTTAAA TERM 549 498576 - 498612 + T 75 -9.7 -2.92714 | opp_overlap 498576 498581 498585, overlap 498581 498588 TATAGAATTATAGCA CAAAACAAATAATGTTA CAA TAACATTTTTTGTTTAG TAACTTTTTGTTAAA TERM 550 498607 - 498581 - T 85 -8.2 -4.5265 | opp_overlap 498576 498581 498588, overlap 498576 498585 AATTATAGCACAAAA CAAATAATGTTA CAA TAACATTTTTTG TTTAGTAACTTTTTG TERM 551 498581 - 498607 + T 77 -8.2 -3.85891 | opp_overlap 498581 498576 498585, overlap 498576 498588 AATTATAGCACAAAA CAAATAATGTTA CAA TAACATTTTTTG TTTAGTAACTTTTTG TERM 552 498588 - 498600 + T 85 -4.9 -5.68438 | opp_overlap 498585 498581 498576, overlap 498581 498576 GCACAAAACAAATAA TGTTA CAA TAACA TTTTTTGTTTAGTAA TERM 553 499189 - 499170 - T 74 -9.4 -2.78706 | opp_overlap 499170 499168, overlap 499169 AAGTAGATTCTAAAC TTTTGCAG ACGC CTGCAAAA TCGTTTTTGGTAGGA TERM 554 499170 - 499189 + T 78 -9.4 -3.28472 | opp_overlap 499169 499170, overlap 499168 AAGTAGATTCTAAAC TTTTGCAG ACGC CTGCAAAA TCGTTTTTGGTAGGA TERM 555 499772 - 499751 - T 93 -9.5 -4.60797 | opp_overlap 499755, overlap 499755 CGGTTATATACAAAA TAAAGGGCC CTGG AGCCCTTTA TAGTAAGTTTTCATT TERM 556 499768 - 499755 - T 78 -5.9 -4.85653 | opp_overlap 499755, overlap 499751 TATATACAAAATAAA GGGCC CTGG AGCCC TTTATAGTAAGTTTT TERM 557 501628 - 501618 - T 74 -4 -5.28414 | opp_overlap 501613 501618 TAAGAAACAGAAAAA CAAT TGA ATTG TTTTCATTCCTCATA TERM 558 503889 - 503916 + T 72 -5.8 -4.38154 | opp_overlap 503895 503900, overlap 503892 ATTTTAAACCCTCTT TTATAATTGAAT AATT ATTCAATTATTA TTTTCTAAAAAATCT TERM 559 503892 - 503913 + T 80 -7.5 -4.30995 | opp_overlap 503895 503900, overlap 503889 TTAAACCCTCTTTTA TAATTGAAT AATT ATTCAATTA TTATTTTCTAAAAAA THA_501 505558 - 504149 - | zinc metalloprotease YluC TERM 560 504886 - 504876 - G 79 -5.4 -5.22006 | opp_overlap 504874 504876 CCAGCATAATAAAAA CCAA TTG TTGG TCTTTCAGGAACATA TERM 561 505074 - 505093 + g 81 -5.8 -5.243 | ATGTATTCAGGTGGA GAAATTCT AGGA GGAATTTC TTTTTTAATAATTTC THA_502 506942 - 505632 - | respons regulator THA_503 507820 - 506999 - | integrase, catalytic region THA_504 509647 - 508265 - | HD domain protein TERM 562 509645 - 509673 + g 100 -11.8 -5.09426 | opp_overlap 509645 ACACTTTTCAAACAA CATGGTTTCGGT ATTCC ACCGGAGCCATG TTTTTTAACCTTGCC TERM 563 509673 - 509645 - G 79 -8.1 -3.91984 | opp_overlap 509645 ACACTTTTCAAACAA CATGGTTTCGGTA TTC CACCGGAGCCATG TTTTTTAACCTTGCC TERM 564 510674 - 510687 + r 71 -5.3 -4.67982 | opp_overlap 510674 AAAGAGAAGCAATAG TCTTC TTAG GAAGA TTTTCTTCAATGAAA TERM 565 510775 - 510813 + r 90 -4.7 -5.72053 | gap 2, opp_overlap 510775 TTTGCCAATGAAAAA CACCCCCTAGATAGTTATA TTT TATCACT-TCC-GGGGGTG TTTTTTATTTCGTTC TERM 566 510813 - 510775 - R 83 -6.9 -4.8622 | gap 2, opp_overlap 510775 TTTGCCAATGAAAAA CACCCCCTAGATAGTTATA TTT TATCACT-TCC-GGGGGTG TTTTTTATTTCGTTC THA_505 511203 - 510841 - | hypothetical protein ispG 511249 - 512283 + | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase THA_507 513292 - 512261 - | hypothetical protein TERM 567 513463 - 513482 + H 100 -11.4 -5.31519 | opp_overlap 513453 513463 TAAATCCTTGAAAAA GGGGCTCA CTAT TGGGCCCC TTTTTCTTTAGCTGT TERM 568 513482 - 513463 - H 90 -9.2 -4.60924 | opp_overlap 513463, overlap 513453 TAAATCCTTGAAAAA GGGGCTCA CTAT TGGGCCCC TTTTTCTTTAGCTGT TERM 569 513592 - 513582 - g 72 -4 -5.14563 | TTCTCTACCAAAAAA CATA CAC TATG AAAATTTAGTTGTTG TERM 570 513603 - 513615 + G 86 -6.3 -5.46698 | opp_overlap 513601 CTATGAAAATTTAGT TGTTG TTC CAACA TTTTTTGATTTTCAC TERM 571 513920 - 513906 - g 71 -5.8 -4.51097 | TGAATTAGTAGAAAA TTTTTC AAA GAAAAA ACCACACCTTCTTCT THA_508 513505 - 514641 + | dihydroorotase THA_509 514619 - 515266 + | dihydroorotate dehydrogenase electron transfer protein TERM 572 515527 - 515513 - g 76 -2.8 -5.5454 | TTAAAGAAACAAAAA CAATAC TTA GTCTTG GAGGAGATAGTAAAG pyrD 515263 - 516081 + | dihydroorotate dehydrogenase TERM 573 516295 - 516280 - g 74 -6.1 -4.4773 | opp_overlap 516280 CTAGATCAATTAAAA GCTGG GATCAT CCAGC TATAATAGGTTTTAC pyrF 516078 - 516689 + | orotidine 5'-phosphate decarboxylase pyrE 516680 - 517246 + | orotate phosphoribosyltransferase TERM 574 517278 - 517244 - T 100 -12.2 -5.17353 | opp_overlap 517252 517277, overlap 517248 AGATTCATTAAAAAA TAAACAAAGCGTGGCG TTA CGCCACGCTTTATATT TTGTCCAGGATAAAA TERM 575 517274 - 517248 - T 100 -17.4 -5.0917 | opp_overlap 517252, overlap 517244 TCATTAAAAAATAAA CAAAGCGTGGCG TTA CGCCACGCTTTA TATTTTGTCCAGGAT TERM 576 517252 - 517270 + T 100 -16 -4.51238 | opp_overlap 517248 517244 TAAAAAATAAACAAA GCGTGGCG TTA CGCCACGC TTTATATTTTGTCCA THA_513 518553 - 517294 - | sugar ABC transporter, periplasmic sugar-binding protein, putative TERM 577 519864 - 519849 - g 72 -7.6 -3.55071 | opp_overlap 519848 GTATATCTTTGCAAA TGAAGC TGGA GCTTCA GTATACTCTGTCTCA TERM 578 520455 - 520437 - g 79 -6 -5.13521 | AAACGAGTTAAAAAA TCCTGGAT TAG ACCCAAGA GAATCTATTCCTAAG THA_514 518677 - 520704 + | S1 RNA binding domain protein TERM 579 521086 - 521054 - g 72 -7.7 -3.57715 | opp_overlap 521057 521060, overlap 521052 521057 521060 AAAATAGATCAAACA CCAGAATACAGCGGA TTA TCTGCTGAATTCTTG CTTGGAATTGCTAAA TERM 580 521057 - 521083 + G 83 -10.2 -3.37879 | opp_overlap 521057 521054 521052 521060, overlap 521060 ATAGATCAAACACCA GAATACAGCGGA TTA TCTGCTGAATTC TTGCTTGGAATTGCT THA_515 520733 - 521188 + | purine-binding chemotaxis protein THA_516 523352 - 521181 - | primosomal protein N' TERM 581 521458 - 521479 + g 75 -7.3 -4.15201 | opp_overlap 521458 521457 521453 ATAATATCAACAAAT GGAGGGT AATTGAGA ACCCTCC TTTGGTTTAATTCAT TERM 582 522707 - 522728 + g 81 -4.5 -5.36314 | overlap 522708 CTTCAACAACTTTCT CTTGTTCTT CATT AAGAACAAC TTTTTTAATCTTTTC TERM 583 522708 - 522727 + g 74 -8 -3.79348 | overlap 522707 TTCAACAACTTTCTC TTGTTCTT CATT AAGAACAA CTTTTTTAATCTTTT TERM 584 523501 - 523474 - R 71 -2 -5.39721 | gap 1, opp_overlap 523474 523460 TTATCATATAAAAAA GTGGC-TCCTT AAAAAAA ATGGAAGCCAC TTTTTTATCAGAAAT THA_517 524396 - 523521 - | periplasmic serine protease TERM 585 524020 - 524034 + g 71 -7.2 -3.73107 | GTCACTTTCCCTTTA TGCTTT TTT AAAGCA TTTGCAATTTGCTCA TERM 586 524406 - 524434 + r 87 -10.4 -3.71998 | opp_overlap 524411, overlap 524411 ACTCAATTATATCAA AAAAAGCAAGGC ATGAC GCCTTGCTTTTA TTATCTTCCTAAATA TERM 587 524411 - 524429 + r 100 -10.3 -4.91285 | opp_overlap 524411, overlap 524406 ATTATATCAAAAAAA GCAAGGC ATGAC GCCTTGC TTTTATTATCTTCCT TERM 588 524429 - 524411 - R 100 -11 -5.59357 | opp_overlap 524411 524406 ATTATATCAAAAAAA GCAAGGCA TGA CGCCTTGC TTTTATTATCTTCCT THA_518 525429 - 524452 - | pyruvate oxidoreductase beta subunit TERM 589 525175 - 525187 + g 70 -6.3 -4.15453 | opp_overlap 525174 525175 TTCTACACCACTAAC TGTTG CTG CAACA TTTTCAAATGCATTA THA_519 526621 - 525443 - | pyruvate synthase subunit PorA THA_520 526967 - 526635 - | pyruvate synthase subunit PorD THA_521 527535 - 526960 - | pyruvate/ketoisovalerate oxidoreductases common subunit gamma THA_522 529328 - 527715 - | glycoside hydrolase, family 57 TERM 590 527773 - 527789 + g 85 -3.7 -5.76633 | overlap 527775 AAAATATCATCTGTC CATTCAT AAT ATGAAAG TTTTTTTGTATCTAC TERM 591 527928 - 527907 - G 74 -7.3 -3.96148 | overlap 527908 527917 TGTTGTCATTATAAA CGCCCAATC ACTT GATTGAGCA AGCAATAATTCTCTG TERM 592 527927 - 527908 - G 72 -8.6 -2.97475 | overlap 527907 527917 GTTGTCATTATAAAC GCCCAATC ACTT GATTGAGC AAGCAATAATTCTCT TERM 593 528172 - 528187 + g 76 -6.2 -4.59109 | TCAGAAGCCTTTAAT GTTCTT ACCA AAGAAC TTTTTGAAGCCTGTC THA_523 530116 - 529331 - | hypothetical protein TERM 594 530062 - 530083 + g 81 -3.7 -5.61824 | overlap 530057 ATTTTAACTCCTGAA TGGTCGGAT TTGA ATCTAACCA TTTTTTTAACTTTTC TERM 595 530130 - 530160 + r 70 -6.4 -4.17608 | ATCCTACTCCCCCCT TTTACTAAGAATTT TGT AAAGTTTTAGTAAA TATTTTTTCAATAAA sdaA1 531128 - 530271 - | A L-serine dehydratase, iron-sulfur-dependent, alpha subunit TERM 596 530635 - 530606 - G 79 -7.7 -4.22283 | TAAAAAAATATGAAA GCCCTGCAGCCGC CATT GCAGCAGCAGCAC CAATTTCTGCTTGAC TERM 597 530659 - 530678 + g 85 -5.7 -5.44119 | GCTTGACAGCCTCCT GCAGCAC CGGAAA GTGTTGC TTTTTTTGCAATAAC sdaB 531775 - 531128 - | B L-serine dehydratase, iron-sulfur-dependent, beta subunit TERM 598 531937 - 531918 - R 100 -12.2 -3.91897 | opp_overlap 531918 CCTCCCAGCCAGAAA TTGCCCCT GTTA AGGGGCAA TTTTTTCTAGTATTT TERM 599 531918 - 531937 + r 100 -12.2 -5.38321 | opp_overlap 531918 CCTCCCAGCCAGAAA TTGCCCCT GTTA AGGGGCAA TTTTTTCTAGTATTT THA_527 533144 - 531927 - | metal dependent phosphohydrolase TERM 600 532861 - 532847 - G 76 -8.6 -3.41359 | overlap 532852 CTTTTAAAAGTAACA CAGAAG CAG CTTCTG CATCTAAAATATTGC THA_528 535170 - 533149 - | hypothetical protein TERM 601 534371 - 534382 + g 70 -4.4 -4.92239 | ACAAATTCCTCTTCA GGTA TATC TACC TTTTTCGGTTTTTCA THA_529 535799 - 535167 - | hypothetical protein THA_530 536730 - 535792 - | ggdef domain/hd domain protein, putative TERM 602 536589 - 536555 - G 77 -9.6 -3.00704 | opp_overlap 536555 536554 536555, overlap 536566 ATTTTCGAAATTATA TTTTCTGAAAATTTTG GAT CAAAAATTTCAAAAAA ATTTGCTATAAAATA THA_531 538651 - 536723 - | adenylate cyclase TERM 603 537118 - 537108 - G 71 -6.8 -3.98256 | GGTGCACCAAAAACA GCCA TTA TGGC ATCTCCAACAAATTT TERM 604 537235 - 537247 + g 83 -7.7 -4.60797 | opp_overlap 537235 CAAGTTTTTCAGAAA GGCTT GTA AAGCC TTTTATGTCTGAAAA TERM 605 537247 - 537235 - G 74 -7.7 -3.86822 | opp_overlap 537235 CAAGTTTTTCAGAAA GGCTT GTA AAGCC TTTTATGTCTGAAAA THA_532 539325 - 538675 - | hypothetical protein TERM 606 539255 - 539236 - G 75 -5.6 -4.81357 | opp_overlap 539237 539238, overlap 539238 ATACCACAAAAGAAA TACCGACG CATG CGTCGGCT TATGTCCATCAATAT TERM 607 539253 - 539238 - G 93 -10.4 -4.00842 | opp_overlap 539237 539238, overlap 539236 ACCACAAAAGAAATA CCGACG CATG CGTCGG CTTATGTCCATCAAT TERM 608 539238 - 539253 + g 78 -10.4 -2.71119 | opp_overlap 539238 539236, overlap 539237 ACCACAAAAGAAATA CCGACG CATG CGTCGG CTTATGTCCATCAAT flgL 540209 - 539322 - | flagellar hook-associated protein 3 THA_534 542765 - 540222 - | flagellar hook-associated protein 1 TERM 609 542414 - 542402 - G 70 -4.1 -4.89009 | overlap 542413 ACATCGAATCAAAAA GGTAC CTA ATACC CGAATCTCCAGGCTC THA_535 543217 - 542783 - | hypothetical protein TERM 610 543235 - 543246 + r 73 -4.4 -5.03314 | opp_overlap 543235 TTTAACCTCCTAATA TTGC CTTT GCAA TTTTTTCAGGATCAA THA_536 543478 - 543221 - | negative regulator of flagellin synthesis FlgM TERM 611 543529 - 543554 + r 89 -11.9 -3.29147 | opp_overlap 543530, overlap 543524 GTAAAAAAATTAAAA ATTCCCTCCAC GTTT GTGGAGGGAAC TTGGCTTCTATTAAA TERM 612 543553 - 543530 - R 100 -15.4 -5.31158 | opp_overlap 543529 543524 TAAAAAAATTAAAAA TTCCCTCCAC GTTT GTGGAGGGAA CTTGGCTTCTATTAA THA_537 545566 - 543575 - | methyl-accepting chemotaxis protein THA_538 546761 - 545934 - | transporter, small conductance mechanosensitive ion channel (MscS) family trpS 547761 - 546766 - | tryptophanyl-tRNA synthetase TERM 613 546830 - 546843 + g 80 -2.4 -5.72053 | TCTATTGTTTCTCTT GCAA CTTGTC TTGC TTTTTTATTTCCTTC THA_540 550121 - 547761 - | ATP-dependent protease TERM 614 548797 - 548772 - G 70 -4.1 -4.87273 | opp_overlap 548772 AACATTTGACAAAAA GGAATAATATT GCTT AATGTTATCCC TTGTAGCATCCATTT ispE 550929 - 550102 - | 4-diphosphocytidyl-2C-methyl-D-erythritol kinase THA_542 551471 - 550884 - | hypothetical protein THA_543 552842 - 551475 - | MutL protein THA_544 552955 - 553626 + | metal-dependent hydrolase TERM 615 554278 - 554302 + G 78 -10.1 -3.16619 | opp_overlap 554264 554256 554270, overlap 554273 554270 554282 AGGAACAGTTTATAT TCCAGAAAATG TTT CTTTTTCTGGA TATATTAGCTTTGAT TERM 616 554282 - 554292 + G 70 -4 -4.90455 | opp_overlap 554256 554270, overlap 554278 554273 554270 ACAGTTTATATTCCA GAAA ATG TTTC TTTTTCTGGATATAT THA_545 553628 - 554890 + | hypothetical protein TERM 617 555705 - 555683 - g 100 -13.6 -3.41988 | overlap 555681 GCTTATTTAACAAGA GTTGGAAATG GAC CATTTCCAAC AGAAGCATTTGGAAA purA 554906 - 556111 + | adenylosuccinate synthetase THA_547 556123 - 556458 + | Hit family protein TERM 618 556623 - 556663 + G 81 -9.8 -3.38207 | opp_overlap 556617, overlap 556635 ATAGTAAGAGGACTT GAAGCCCAATATTCTGTT GAAAA AACAGATTATTGGGCAAC TTACCTTGTTTATTT TERM 619 557272 - 557246 - g 72 -8 -3.63627 | opp_overlap 557231 TTTGCAGATTCTAAA GGAGTTGGCAAA TAA TTACCCAACTCC AGAAGTATATAATGA THA_548 556566 - 558041 + | tetratricopeptide repeat domain protein TERM 620 558073 - 558048 - f 100 -14.9 -3.42241 | opp_overlap 558048, overlap 558052 AACATATAGGTATAA TAAATCCCGCA AGAA TGCGGGATTTA TTTTTGTTTTAAAAA TERM 621 558048 - 558073 + F 100 -14.9 -5.45802 | opp_overlap 558048 558052 AACATATAGGTATAA TAAATCCCGCA AGAA TGCGGGATTTA TTTTTGTTTTAAAAA TERM 622 558069 - 558052 - f 100 -11.3 -4.34488 | opp_overlap 558048, overlap 558048 TATAGGTATAATAAA TCCCGCA AGAA TGCGGGA TTTATTTTTGTTTTA acpP1 558165 - 558395 + | acyl carrier protein TERM 623 558414 - 558447 + T 100 -9.6 -5.28826 | opp_overlap 558418, overlap 558418 TTACTATACAAAATT AAAAGCCCCCTTCA TAAATT TGAAGGGGGCTTGA TTTTTTATAGACTTT TERM 624 558418 - 558443 + T 100 -14.8 -3.99236 | opp_overlap 558418, overlap 558414 TATACAAAATTAAAA GCCCCCTTCA TAAATT TGAAGGGGGC TTGATTTTTTATAGA TERM 625 558443 - 558418 - T 100 -14.8 -4.75518 | opp_overlap 558418 558414 TATACAAAATTAAAA GCCCCCTTCA TAAATT TGAAGGGGGC TTGATTTTTTATAGA THA_550 559747 - 558464 - | glutamate dehydrogenase TERM 626 559207 - 559221 + g 76 -8.6 -3.41302 | overlap 559205 ATGGTTTTCCGGTAA CTACAC CAA GTGTAG TATTTCCAGTATTCA TERM 627 559331 - 559354 + g 76 -5.4 -5.05301 | gap 1, overlap 559332 TACCATCATTTGAAT TTCAG-AGAAG AAT CTTCTACTGAG TTTTTCTAATTCTTT TERM 628 559990 - 559961 - R 100 -12.2 -5.70829 | opp_overlap 559964, overlap 559964 AATACTACAAAAAAA TAAGTAGGGCGC TCAAGT GCGCCCTACTTT CTATTTCCATCCATT TERM 629 559964 - 559987 + r 100 -13.9 -4.35044 | opp_overlap 559964 559961 ACTACAAAAAAATAA GTAGGGCGC TCAAGT GCGCCCTAC TTTCTATTTCCATCC TERM 630 559987 - 559964 - R 100 -13.9 -4.9041 | opp_overlap 559964, overlap 559961 ACTACAAAAAAATAA GTAGGGCGC TCAAGT GCGCCCTAC TTTCTATTTCCATCC THA_551 560551 - 559991 - | hypothetical protein THA_552 560835 - 560575 - | hypothetical protein TERM 631 561423 - 561413 - g 72 -6.8 -4.11472 | overlap 561411 GCTAAAGCAAAAACA CCCA TAT TGGG GATATAGACGCATCT THA_553 561267 - 562088 + | integrase, catalytic region, putative TERM 632 563089 - 563073 - g 74 -6.7 -4.24342 | TTTCGGATGAACAAA TTTTGAA ACT TTCAAAA GAAGGTAAAACAACA THA_554 562166 - 564085 + | DNA helicase, putative TERM 633 564080 - 564120 + T 80 -5.5 -5.15117 | opp_overlap 564076 564090, overlap 564081 564089 564090 AAAGGAGTATATTTA GTATAAAAAATTCCCCAGA CAT TCTGGGGAAATTGCTATAA TTTTTTCACATTTTA TERM 634 564081 - 564119 + T 80 -9 -3.67443 | opp_overlap 564076 564090, overlap 564080 564089 564090 AAGGAGTATATTTAG TATAAAAAATTCCCCAGA CAT TCTGGGGAAATTGCTATA ATTTTTTCACATTTT TERM 635 564089 - 564111 + T 85 -10.6 -3.40042 | opp_overlap 564090, overlap 564081 564080 564090 TATTTAGTATAAAAA ATTCCCCAGA CAT TCTGGGGAAA TTGCTATAATTTTTT TERM 636 564110 - 564090 - T 100 -14.1 -5.31877 | opp_overlap 564089 564081 564080 564090 ATTTAGTATAAAAAA TTCCCCAGA CAT TCTGGGGAA ATTGCTATAATTTTT TERM 637 564090 - 564110 + T 100 -14.1 -2.62398 | opp_overlap 564090, overlap 564089 564081 564080 ATTTAGTATAAAAAA TTCCCCAGA CAT TCTGGGGAA ATTGCTATAATTTTT THA_555 565833 - 564178 - | fhs formate--tetrahydrofolate ligase THA_556 567019 - 565823 - | hypothetical protein hslO 567879 - 567016 - | chaperonin HslO THA_558 568104 - 567895 - | hypothetical protein TERM 638 570198 - 570210 + G 72 -6.3 -4.25104 | opp_overlap 570198 570197 CCAATGACAAGAAAC GCATT TTT AATGC TTTTAATGCAAAAAG TERM 639 571244 - 571222 - g 72 -6.4 -4.22375 | opp_overlap 571226 571228, overlap 571224 AGATGATTGAAGAAA GAGATATGTA TGA TACATATCTT GAAATATAGAGGTGT TERM 640 571242 - 571224 - g 80 -9 -3.70709 | opp_overlap 571226 571228, overlap 571222 ATGATTGAAGAAAGA GATATGTA TGA TACATATC TTGAAATATAGAGGT THA_559 568326 - 571253 + | single-stranded DNA-specific exonuclease THA_560 571263 - 571871 + | putative Holliday junction resolvase THA_562 571978 - 573048 + | Xaa-Pro dipeptidase THA_563 573045 - 573296 + | hypothetical protein THA_564 573274 - 573654 + | F-ATPase I-subunit, putative atpB 573638 - 574480 + | ATP synthase F0, A subunit THA_566 574505 - 574756 + | F-ATPase c-subunit TERM 641 574794 - 574817 + G 74 -2.4 -5.61689 | overlap 574795 574796 574798 GTTTGAAATTAATTT GACATCAGTT GTAC AACTGATGAG TTTTTTGTTGCTTTT TERM 642 574796 - 574815 + G 75 -9.4 -2.93572 | overlap 574795 574794 574798 TTGAAATTAATTTGA CATCAGTT GTAC AACTGATG AGTTTTTTGTTGCTT atpF 574771 - 575256 + | ATP synthase F0, B subunit atpH 575253 - 575804 + | ATP synthase F1, delta subunit atpA 575809 - 577332 + | ATP synthase F1, alpha subunit atpG 577339 - 578160 + | ATP synthase F1, gamma subunit atpD 578183 - 579595 + | ATP synthase F1, beta subunit TERM 643 579621 - 579593 - f 100 -10.3 -5.42131 | opp_overlap 579596, overlap 579596 CAATTACAGAAAAAA TAATGCGTGGGCA AGT TGCTCACGCATTT TATCTGGGAGGGATC TERM 644 579618 - 579596 - f 100 -12 -4.77122 | opp_overlap 579596, overlap 579593 TTACAGAAAAAATAA TGCGTGGGCA AGT TGCTCACGCA TTTTATCTGGGAGGG TERM 645 579596 - 579618 + F 100 -14.2 -4.52589 | opp_overlap 579596 579593 TTACAGAAAAAATAA TGCGTGGGCA AGT TGCTCACGCA TTTTATCTGGGAGGG THA_572 579640 - 579915 + | ATP synthase, Delta/Epsilon chain, beta-sandwich domain protein TERM 646 580253 - 580243 - g 74 -6.8 -4.23732 | TAAAGACAAAGTAAA GGTC TTA GACC TAAAAACCGCAAGTA THA_573 579920 - 580738 + | hypothetical protein TERM 647 580865 - 580875 + G 70 -4 -4.92828 | TTTTTCTCACTAGGC TTTG CTG CAAA TTTCTTTTTCAGTTT THA_574 580742 - 581248 + | hypothetical protein THA_575 581260 - 581790 + | ribosomal subunit interface protein TERM 648 581845 - 581810 - f 71 -7.6 -3.41114 | opp_overlap 581811 581816, overlap 581809 581811 AATCTAATACAAAAT TTCTAATGGCTTCGGA CTCT TCCGAAGCCATTTTAT TTTTTTAATAGTTTT TERM 649 581844 - 581811 - f 82 -11.1 -2.63584 | opp_overlap 581811 581816, overlap 581810 581809 ATCTAATACAAAATT TCTAATGGCTTCGGA CTCT TCCGAAGCCATTTTA TTTTTTTAATAGTTT TERM 650 581811 - 581844 + F 100 -11.1 -5.5943 | opp_overlap 581810 581809 581811, overlap 581816 ATCTAATACAAAATT TCTAATGGCTTCGGA CTCT TCCGAAGCCATTTTA TTTTTTTAATAGTTT TERM 651 581816 - 581839 + F 100 -15.4 -5.57888 | opp_overlap 581811 581810 581809, overlap 581811 ATACAAAATTTCTAA TGGCTTCGGA CTCT TCCGAAGCCA TTTTATTTTTTTAAT THA_576 581890 - 584517 + | sensor histidine kinase panD 584519 - 584881 + | aspartate 1-decarboxylase TERM 652 585022 - 584998 - g 78 -4.4 -5.38958 | opp_overlap 584998 584996 AGCTATAAAGAAAAA TTGGATGTTT TTCAC AAACATCTAA TATTGGTTACGGTTT THA_578 584887 - 585681 + | hypothetical protein THA_579 585685 - 586284 + | hypothetical protein THA_580 586285 - 587001 + | lipoate protein ligase TERM 653 587111 - 587098 - g 71 -6.7 -3.97043 | opp_overlap 587098 CTGAAGACACAAGAA GAGCT TTAA AGCTC TTAAATTTTTTTGAT TERM 654 587356 - 587369 + G 73 -3.9 -5.29445 | TAAGTGCTAGTGGAT TCTAT GGAA ATAGA TTTTTATTCTTGGGC THA_581 586989 - 587687 + | hypothetical protein THA_582 587743 - 587940 + | hypothetical protein TERM 655 587993 - 587964 - T 76 -8.7 -3.49924 | gap 1, opp_overlap 587970, overlap 587967 587970 GTTAAAGTAGGATAA TAATCAGCCCCCAT TTA ATGGGGGCTT-TTA ATTTATTTTGAAGAA TERM 656 587991 - 587967 - T 79 -8.5 -3.87538 | opp_overlap 587970, overlap 587964 587970 AAAGTAGGATAATAA TCAGCCCCCAT TTA ATGGGGGCTTT TAATTTATTTTGAAG TERM 657 587970 - 587988 + T 100 -14.6 -4.76478 | opp_overlap 587967 587964 587970 GTAGGATAATAATCA GCCCCCAT TTA ATGGGGGC TTTTAATTTATTTTG TERM 658 587988 - 587970 - T 100 -14.6 -3.00003 | opp_overlap 587970, overlap 587967 587964 GTAGGATAATAATCA GCCCCCAT TTA ATGGGGGC TTTTAATTTATTTTG THA_583 588211 - 587996 - | putative regulatory protein, FmdB family TERM 659 588685 - 588700 + G 76 -6.2 -4.58663 | opp_overlap 588699 ATTTATAATAGGATT TCTTGT ATCC ACAAGA TTTTTAACAAATCCT TERM 660 589110 - 589094 - g 88 -9.5 -4.07568 | GTTCTTGCTGGAAAA TCACCTT TTG AAGGTGA CAGAGACCATATCTA THA_584 588392 - 589324 + | lipophilic protein, putative TERM 661 589369 - 589357 - g 75 -4.9 -5.14563 | TTTGTCATTAAAAAA CAAAA ATC TTTTG ATGATGATATTGGCA THA_585 589343 - 589807 + | hypothetical protein TERM 662 589921 - 589907 - f 72 -7.2 -3.90112 | opp_overlap 589907 589906 589909 CTTCTTGTAACGAAA TACAGA CGT TCTGTA ATTGATGATAAAATA TERM 663 591354 - 591335 - f 75 -5 -5.03747 | opp_overlap 591339, overlap 591339 AAATGCCGCAAAAAA TTTAGCCA AATA TGGCTTAA TGTTACCAGTAGGGC TERM 664 591459 - 591480 + F 74 -9.5 -2.75064 | opp_overlap 591458 591459 GGTTGAAGCAGGAAG CCGTGACTT CTAT AAGTCATGG TAATTCACTGAAGAA TERM 665 592234 - 592212 - g 100 -9.2 -5.29445 | overlap 592206 TCTCAACAAGAAAAA TTTTCCTGGG AAA CACAGGAAAA TACGCTATTGGAAGT THA_586 591701 - 592603 + | hypothetical protein TERM 666 592853 - 592872 + G 75 -4.4 -5.32608 | gap 1 AAACCGCACATTTTG GCCTA-TAT TTT ATACTAGGC TTTTTTAGCTTTTTT THA_587 592600 - 593133 + | hypothetical protein TERM 667 593801 - 593787 - g 71 -8.6 -2.80438 | opp_overlap 593787, overlap 593777 593784 CTAAAGAGTTAATTA CTCCAA AAT TTGGAG TTTATCTATGTAAAG TERM 668 593787 - 593801 + G 83 -8.6 -4.17296 | opp_overlap 593777 593787 593784 CTAAAGAGTTAATTA CTCCAA AAT TTGGAG TTTATCTATGTAAAG ribF 593201 - 594070 + | riboflavin biosynthesis protein RibF THA_589 594060 - 594671 + | nth endonuclease III TERM 669 595343 - 595333 - g 72 -4 -5.02476 | ACATGGTGCAAAAAA GAAA TAT TTTC ATGAAGAAATAGGTT THA_590 594668 - 595810 + | pleiotropic regulatory protein THA_591 595812 - 596006 + | hypothetical protein TERM 670 596761 - 596781 + G 73 -8.5 -3.40522 | GATATCTCTCCTACA TTTTTCAAA TTG TTTGAAAAA TTCTCATGGGCCGAT THA_592 596047 - 597387 + | xanthine/uracil permease family protein TERM 671 597406 - 597435 + T 100 -15.1 -3.77111 | opp_overlap 597411, overlap 597411 CATCAATAGCATAAT AAAAAGCAGCCGC ATGT GCGGCTGCTTTTG TTGTAATTTTTGATA TERM 672 597430 - 597411 - T 100 -15 -5.2291 | opp_overlap 597411 597406 ATAGCATAATAAAAA GCAGCCGC ATGT GCGGCTGC TTTTGTTGTAATTTT TERM 673 597411 - 597430 + T 100 -15 -4.88258 | opp_overlap 597411, overlap 597406 ATAGCATAATAAAAA GCAGCCGC ATGT GCGGCTGC TTTTGTTGTAATTTT THA_593 598267 - 597455 - | lipoprotein, putative TERM 674 598430 - 598458 + r 100 -11.8 -5.09426 | opp_overlap 598430 ACACTTTTCAAACAA CATGGTTTCGGT ATTCC ACCGGAGCCATG TTTTTTAACCTTGCC TERM 675 598458 - 598430 - R 77 -8.1 -3.91984 | opp_overlap 598430 ACACTTTTCAAACAA CATGGTTTCGGTA TTC CACCGGAGCCATG TTTTTTAACCTTGCC TERM 676 599459 - 599472 + r 71 -5.3 -4.67982 | opp_overlap 599459 AAAGAGAAGCAATAG TCTTC TTAG GAAGA TTTTCTTCAATGAAA TERM 677 599598 - 599560 - R 83 -6.9 -4.8622 | gap 2, opp_overlap 599560 TTTGCCAATGAAAAA CACCCCCTAGATAGTTATA TTT TATCACT-TCC-GGGGGTG TTTTTTATTTCGTTC TERM 678 599560 - 599598 + r 90 -4.7 -5.72053 | gap 2, opp_overlap 599560 TTTGCCAATGAAAAA CACCCCCTAGATAGTTATA TTT TATCACT-TCC-GGGGGTG TTTTTTATTTCGTTC THA_594 602901 - 599662 - | O-Antigen Polymerase family TERM 679 602006 - 602018 + g 71 -7.7 -3.48342 | GAAACTGAGCTCATA GCAGA AAA TCTGC TTGTCATACTTACTT THA_595 604741 - 605265 + | ATP-dependent DNA helicase THA_596 606568 - 605405 - | hypothetical protein TERM 680 605490 - 605511 + g 80 -8.9 -3.78087 | CCTTCATCTTTCATT CTGTTTATA TATG TATAAACAG TTTGACGTTTTACTT THA_597 608147 - 606957 - | hypothetical protein TERM 681 607125 - 607145 + g 78 -3.3 -5.59564 | opp_overlap 607120, overlap 607120 ATTTACAATATTGTC CAAAGGATA AAT TTTCTTTTG TTTTTTTGGCTTTAT THA_598 608528 - 608647 + | hypothetical protein THA_599 608739 - 608999 + | hypothetical protein TERM 682 609475 - 609465 - g 76 -2.6 -5.65177 | AGATGCAGAAAAAAA TAAA GAT TTTA GAGAAGTTGAAGAAA THA_600 608977 - 609552 + | hypothetical protein THA_601 610999 - 609596 - | ATP-binding protein TERM 683 611077 - 611041 - H 100 -12.7 -5.06451 | opp_overlap 611041 611043 611046, overlap 611043 TATTATTGTAAAAAA TATTATAGTTTAAACTA TTA TAGTTTAAACTATAATT ATAAAAATACGGTTC TERM 684 611075 - 611043 - H 100 -15.3 -4.15748 | opp_overlap 611041 611043 611046, overlap 611041 TTATTGTAAAAAATA TTATAGTTTAAACTA TTA TAGTTTAAACTATAA TTATAAAAATACGGT TERM 685 611043 - 611075 + H 100 -15.3 -3.31263 | opp_overlap 611043 611041, overlap 611041 611046 TTATTGTAAAAAATA TTATAGTTTAAACTA TTA TAGTTTAAACTATAA TTATAAAAATACGGT TERM 686 611640 - 611620 - H 83 -9.8 -3.91882 | opp_overlap 611620, overlap 611615 TCATTATAAAGAGAA TTCCAGGT ATTAA ACCTGGAA TCTTAAAAAGCAGTT TERM 687 611620 - 611640 + H 76 -9.8 -3.02043 | opp_overlap 611620 611615 TCATTATAAAGAGAA TTCCAGGT ATTAA ACCTGGAA TCTTAAAAAGCAGTT TERM 688 611968 - 611991 + H 76 -5.4 -5.06451 | gap 1 TTTCCCCAATTCCCT TCTTCCAGGAA GCC TTTC-GGAAGA TTTTTTCAGATCATA TERM 689 612542 - 612497 - H 100 -15.8 -2.9039 | opp_overlap 612504 612506, overlap 612502 ATATTATGGCATATA GTCAATTCACTGACCAAATT GGGCCT AATTTAGTCAGTGTATTGAC TAAAAATGAAAAATT TERM 690 612537 - 612502 - H 72 -8.5 -3.16177 | opp_overlap 612504 612506, overlap 612497 ATGGCATATAGTCAA TTCACTGACCAAATT GGGCCT AATTTAGTCAGTGTA TTGACTAAAAATGAA TERM 691 612504 - 612535 + H 76 -9.6 -3.08996 | opp_overlap 612502 612497, overlap 612506 GGCATATAGTCAATT CACTGACCAAATTG GGCC TAATTTAGTCAGTG TATTGACTAAAAATG TERM 692 612778 - 612756 - H 82 -10.8 -2.71011 | opp_overlap 612756, overlap 612758 ACGTTTTTCGAATTA TATCGTTTTA TTA TAAAACGATA TTTAACATTAAGCCT TERM 693 612756 - 612778 + H 89 -10.8 -3.66356 | opp_overlap 612756 612758 ACGTTTTTCGAATTA TATCGTTTTA TTA TAAAACGATA TTTAACATTAAGCCT TERM 694 612776 - 612758 - H 73 -9 -2.90075 | opp_overlap 612756, overlap 612756 GTTTTTCGAATTATA TCGTTTTA TTA TAAAACGA TATTTAACATTAAGC TERM 695 613961 - 613947 - g 76 -2.8 -5.61881 | opp_overlap 613947 613948, overlap 613948 TGGTAAAAATAAAAA GCTGAA AAA TTCAGA TTTTGTGATAAGAGA THA_603 612868 - 614037 + | hypothetical protein THA_604 614417 - 614698 + | hypothetical protein THA_605 616365 - 614983 - | ATP-binding protein TERM 696 615732 - 615716 - G 82 -6.7 -4.86385 | opp_overlap 615712 615710 615716 AGTTTTAAAAATAAA TTTTCAA TGT TTGAAAA TATATCTGTTTTTCC TERM 697 615886 - 615898 + g 81 -6.3 -5.05228 | ACTCCCAGTTTTTCT TCCAT ATA ATGGA TTTTTATAATTTAAT TERM 698 615992 - 616015 + g 76 -2.6 -5.60993 | gap 1 TCATCTAGTAAGATT TGAAGA-ATAG AAA TTATCTCTTCA TTTTTTTCTGCAAGA THA_606 616968 - 616630 - | hypothetical protein THA_607 619113 - 617731 - | dexx-box atpase TERM 699 618204 - 618226 + g 72 -6.5 -4.29187 | opp_overlap 618204 618203 AATTAAAATAGAAAT CAAAATAAA AATCA TTTATTTTG TATTTTTTCATTCTC TERM 700 619186 - 619156 - R 79 -10.6 -2.59298 | opp_overlap 619153 619158 619158, overlap 619155 619153 619158 TATTTCATATAACAT TATGTTGGTCAACA TTA TGTTATCCAACATA TTACAGACATAATAA TERM 701 619184 - 619158 - R 71 -8.8 -2.83249 | opp_overlap 619153 619158 619158, overlap 619156 619155 619153 TTTCATATAACATTA TGTTGGTCAACA TTA TGTTATCCAACA TATTACAGACATAAT TERM 702 619286 - 619272 - R 91 -7.1 -5.21709 | opp_overlap 619272, overlap 619273 GTTGATATTAAAAAA TCCCC TTTCG GGGGA TAATGTATCAATCAG TERM 703 619284 - 619273 - R 70 -7.2 -3.72302 | opp_overlap 619272, overlap 619272 TTGATATTAAAAAAT CCCC TTTC GGGG GATAATGTATCAATC THA_608 619407 - 619294 - | hypothetical protein THA_609 619436 - 619576 + | hypothetical protein THA_610 619633 - 620136 + | transcriptional regulator, LacI family TERM 704 620179 - 620150 - T 77 -10 -2.57503 | opp_overlap 620150, overlap 620149 620148 AAACTTAAAGAAATT CCCCCGGACTTT TTAATT AACATCCGGGGG TTTTATTAGTTAAAT TERM 705 620150 - 620179 + T 87 -7.8 -4.79174 | opp_overlap 620149 620148 620150 AAACTTAAAGAAATT CCCCCGGACTTT TTAATT AACATCCGGGGG TTTTATTAGTTAAAT THA_611 621874 - 620189 - | carbon starvation-induced protein TERM 706 621668 - 621643 - G 76 -7.7 -3.92542 | gap 1, opp_overlap 621648, overlap 621645 CCCATCCCCAAATAA CACCTATTGCAG GAC CTACAATAGG-G CCTGTACCTGCTATT TERM 707 621667 - 621645 - G 93 -11.4 -3.55202 | opp_overlap 621648, overlap 621643 CATCCCCAAATAACA CCTATTGCAG GAC CTACAATAGG GCCTGTACCTGCTAT TERM 708 621958 - 621972 + r 88 -7.1 -5.00616 | opp_overlap 621958 CTACGTTAAAAAAAA TGGCC TAAAC GGCCA TTTTTTAGGAGCAAA TERM 709 621972 - 621958 - R 100 -7.1 -5.78622 | opp_overlap 621958 CTACGTTAAAAAAAA TGGCC TAAAC GGCCA TTTTTTAGGAGCAAA THA_612 622696 - 622013 - | autolysin response regulator THA_613 624357 - 622693 - | regulator of cell autolysis TERM 710 623896 - 623882 - G 71 -7.2 -3.73873 | TCAAAGGCAAGAGAA TATGGT TTT ACCATA ACCAAAACGTATGTA THA_614 624554 - 624351 - | hypothetical protein TERM 711 624723 - 624681 - R 100 -10.8 -5.68438 | opp_overlap 624684 624684 624687 624688, overlap 624683 624688 GTATCAAATAAAAAA CATTAAAGGAAATTCCTGTA TTT TACAGGAATTTCCATTATTT GTAAATATTTTCCTT TERM 712 624721 - 624683 - R 100 -13.4 -4.47052 | opp_overlap 624684 624684 624687 624688, overlap 624681 624688 ATCAAATAAAAAACA TTAAAGGAAATTCCTGTA TTT TACAGGAATTTCCATTAT TTGTAAATATTTTCC TERM 713 624684 - 624720 + r 100 -16.9 -4.01564 | opp_overlap 624683 624681 624688, overlap 624684 624687 624688 TCAAATAAAAAACAT TAAAGGAAATTCCTGTA TTT TACAGGAATTTCCATTA TTTGTAAATATTTTC TERM 714 624687 - 624717 + r 100 -14.2 -4.10791 | opp_overlap 624683 624681 624688, overlap 624684 624684 624688 AATAAAAAACATTAA AGGAAATTCCTGTA TTT TACAGGAATTTCCA TTATTTGTAAATATT TERM 715 624688 - 624716 + r 100 -17.7 -3.0539 | opp_overlap 624688 624683 624681, overlap 624684 624687 624684 ATAAAAAACATTAAA GGAAATTCCTGTA TTT TACAGGAATTTCC ATTATTTGTAAATAT TERM 716 624716 - 624688 - R 100 -17.7 -4.20024 | opp_overlap 624684 624687 624684 624688, overlap 624683 624681 ATAAAAAACATTAAA GGAAATTCCTGTA TTT TACAGGAATTTCC ATTATTTGTAAATAT THA_615 625596 - 624763 - | glycerol-3-phosphate ABC transporter permease protein TERM 717 625374 - 625364 - G 70 -5.4 -4.55697 | overlap 625365 AGGGTTATAAACAAA GCTA CTA TAGC AGAATTAATTATCAT TERM 718 625569 - 625582 + g 76 -3.9 -5.47159 | opp_overlap 625569, overlap 625562 TGATTTCTGAAATAA TAAAG GAAA CTTTA TTTTTTCTATTCACA THA_616 626473 - 625607 - | sn-glycerol-3-phosphate transport system permease protein UgpA TERM 719 626519 - 626499 - R 100 -11.8 -4.38712 | CCTATTTCTATAAAA GCGCCCCC AAAAA GGAGGCGC ATCTAAAAATTACTG THA_617 627858 - 626545 - | glycerol-3-phosphate ABC transporter TERM 720 631129 - 631101 - g 72 -6.2 -4.20883 | opp_overlap 631103 GAAAAAGTTTTAAAA TATGCAAAAGTT GGAGA AAATTTTGCATA TATAGAGTCGAATGG THA_618 628194 - 632108 + | alpha-2-macroglobulin family N- region THA_619 632116 - 632514 + | hypothetical protein THA_620 632471 - 633088 + | hypothetical protein TERM 721 633121 - 633100 - T 100 -8.7 -5.44119 | opp_overlap 633100, overlap 633102 TTGATTGTAAAAAAA GGGTGATGC ATTC GCATCACTC TTTTAGATATTTGTT TERM 722 633100 - 633121 + T 100 -10.9 -4.34811 | opp_overlap 633100 633102 TTGATTGTAAAAAAA GGGTGATGC ATTC GCATCACTC TTTTAGATATTTGTT TERM 723 633119 - 633102 - T 79 -9.9 -2.90726 | opp_overlap 633100, overlap 633100 GATTGTAAAAAAAGG GTGATGC ATTC GCATCAC TCTTTTAGATATTTG THA_621 635056 - 633116 - | acylamino-acid-releasing enzyme TERM 724 634784 - 634766 - G 76 -6.8 -4.4009 | opp_overlap 634761 634766 GCTTATTTTATAAAA TGAAGAAA ATT TTTCTCCA TTTTGCTTTCTCTGC TERM 725 635147 - 635122 - R 100 -14.8 -5.38951 | AATGTATATAAAAAA TCCCCCATCC AAAAAA GGATGGGGGA TATAGATAAATGTTA THA_622 636786 - 635269 - | sodium- and chloride-dependent transporter TERM 726 636255 - 636237 - G 70 -6 -4.29049 | overlap 636234 636244 CAAGGATTAAAAGAA GTACAACT GGA AGTGGTAC TGTCCATGCAACTGT THA_623 638380 - 636929 - | ggdef domain protein folA 638965 - 638477 - | dihydrofolate reductase TERM 727 639129 - 639118 - g 75 -5.8 -4.84761 | ATATTCTTATAAAAA GACC TATT GGTC CTGAAAAGATTCATG THA_625 639045 - 639509 + | acetyltransferase, gnat family TERM 728 639538 - 639550 + F 75 -2.7 -5.5943 | overlap 639545 AATGATATATTTTGT TGTTA TTT TAGCA TTTTTTTGCTAATTT TERM 729 639545 - 639562 + F 70 -4.2 -5.08878 | overlap 639538 TATTTTGTTGTTATT TTAGCA TTTTTT TGCTAA TTTTATTTCTCTATT TERM 730 640430 - 640414 - g 82 -6.7 -4.8543 | GAAGGTCTAGAAAAA TTAATTC AAA GAATTAA AGAACATGTATCAAG THA_626 639580 - 640575 + | sensory box histidine kinase TERM 731 640964 - 640944 - T 100 -14.1 -5.31456 | opp_overlap 640944 TTAATGTATAAAAAA TGCTCCATC TTG GATGGAGCA TTTTTTTTTGCATAG TERM 732 640944 - 640964 + T 100 -14.1 -6.11644 | opp_overlap 640944 TTAATGTATAAAAAA TGCTCCATC TTG GATGGAGCA TTTTTTTTTGCATAG TERM 733 641078 - 641038 - T 100 -15.2 -3.17901 | gap 1, opp_overlap 641038 641040 641045, overlap 641045 AGATCTTTAATTTAA TAA-AAAATCTCCCTTTCA AAGT TGAAAGGGAGATTTTATTA CTTTATTGTGTTAAT TERM 734 641038 - 641078 + T 100 -15.2 -3.27523 | gap 1, opp_overlap 641038 641045, overlap 641040 641045 AGATCTTTAATTTAA TAA-AAAATCTCCCTTTCA AAGT TGAAAGGGAGATTTTATTA CTTTATTGTGTTAAT TERM 735 641040 - 641075 + T 100 -15 -3.75295 | opp_overlap 641038 641045, overlap 641038 641045 ATCTTTAATTTAATA AAAAATCTCCCTTTCA AAGT TGAAAGGGAGATTTTA TTACTTTATTGTGTT TERM 736 641070 - 641045 - T 100 -14.9 -5.5074 | opp_overlap 641040 641038 641045, overlap 641038 TAATTTAATAAAAAA TCTCCCTTTCA AAGT TGAAAGGGAGA TTTTATTACTTTATT TERM 737 641045 - 641070 + T 100 -14.9 -4.88407 | opp_overlap 641045 641038, overlap 641040 641038 TAATTTAATAAAAAA TCTCCCTTTCA AAGT TGAAAGGGAGA TTTTATTACTTTATT rplA 641779 - 641081 - | ribosomal protein L1 rplK 642230 - 641805 - | ribosomal protein L11 TERM 738 641952 - 641973 + g 89 -9.5 -4.24384 | TCCTACCATTTTTCT CTTTGGTTC TTGA GAACCAGAG TTTAATTTTGCTGCT nusG 643352 - 642288 - | transcription termination/antitermination factor NusG TERM 739 643256 - 643271 + g 90 -7.6 -5.13343 | opp_overlap 643255 643256 CCCTAGAAATAACAT GCTCAA GGCC TTGAGC TTTTATTTTCGCTTC secE 643558 - 643370 - | preprotein translocase, SecE subunit rpsR 644276 - 644052 - | ribosomal protein S18 TERM 740 644139 - 644160 + g 81 -4.5 -5.40873 | TTTTGCACAATTTCC GGTAATTCT TCTT GGAATTATC TTTTCTTTTTCTGTT THA_638 644516 - 644301 - | ssb single-strand binding protein rpsF 645061 - 644702 - | ribosomal protein S6 TERM 741 645129 - 645144 + H 85 -10.4 -3.41602 | opp_overlap 645129 GTTTTCAGAATAAAA GGGAGC TATT GCTCCC TTCTGGTGGGCTCGG TERM 742 645144 - 645129 - H 100 -10.4 -4.77165 | opp_overlap 645129 GTTTTCAGAATAAAA GGGAGC TATT GCTCCC TTCTGGTGGGCTCGG TERM 743 645522 - 645532 + G 78 -4 -5.43866 | TATCTAAATATTTGG TTGT TAA ACAA TTTTTTTGGGACTTG THA_642 645422 - 646489 + | rod shape-determining protein RodA TERM 744 646647 - 646633 - g 79 -5.8 -5.01732 | opp_overlap 646633 AATTCTTTGAAAAAA TTTGTT GAG AACAAA TTAAATGGTTACGAA TERM 745 646935 - 646890 - g 100 -12.3 -2.76227 | gap 1, opp_overlap 646889 646890, overlap 646886 646887 TTCAAGAGAAATTTA CCCTGGACTTTCAAAGT-ATAA GTT TTATTACTTTAAAAGTCCAAAG ATTATGACGGATTAC THA_643 646486 - 647121 + | hypothetical protein glyQ 647137 - 647988 + | glycyl-tRNA synthetase, alpha subunit TERM 746 649591 - 649581 - g 76 -5.4 -5.02476 | overlap 649567 AGATTTTGGAAAAAA CCAT TGT ATGG AAGACTTGTAGCAGA glyS 647988 - 649901 + | glycyl-tRNA synthetase, beta subunit THA_646 650007 - 650513 + | rubrerythrin TERM 747 650557 - 650530 - f 100 -12.9 -3.06737 | opp_overlap 650530 650534, overlap 650534 TATTAAGTTTTAAGA TAAATGGGGGA AATAGA TCCCCCATTTA TTTATTTGGAGGTGG TERM 748 650530 - 650557 + F 100 -12.9 -4.42806 | opp_overlap 650530 650534, overlap 650534 TATTAAGTTTTAAGA TAAATGGGGGA AATAGA TCCCCCATTTA TTTATTTGGAGGTGG TERM 749 650534 - 650553 + F 93 -9.3 -4.78326 | opp_overlap 650530 650534, overlap 650530 AAGTTTTAAGATAAA TGGGGGA AATAGA TCCCCCA TTTATTTATTTGGAG TERM 750 650553 - 650534 - f 88 -9.3 -4.20025 | opp_overlap 650534 650530, overlap 650530 AAGTTTTAAGATAAA TGGGGGA AATAGA TCCCCCA TTTATTTATTTGGAG hflK 650577 - 651506 + | HflK protein hflC 651503 - 652357 + | HflC protein TERM 751 652386 - 652358 - f 100 -14.7 -4.21812 | opp_overlap 652359, overlap 652359 TTTGAGGTAAAATAA TTCCTTAGGGGAA GCT TTCCCCTAAGGAT TTTAGCTAAAAGGAG TERM 752 652359 - 652385 + F 100 -18.2 -4.18018 | opp_overlap 652358 652359 TTGAGGTAAAATAAT TCCTTAGGGGAA GCT TTCCCCTAAGGA TTTTAGCTAAAAGGA TERM 753 652385 - 652359 - f 100 -18.2 -3.12605 | opp_overlap 652359, overlap 652358 TTGAGGTAAAATAAT TCCTTAGGGGAA GCT TTCCCCTAAGGA TTTTAGCTAAAAGGA THA_649 652412 - 653332 + | inosine-5-monophosphate dehydrogenase-related protein THA_650 654314 - 653322 - | O-sialoglycoprotein endopeptidase TERM 754 654161 - 654203 + g 79 -5.4 -5.29782 | opp_overlap 654164, overlap 654162 654163 CTATTGGAAGATTAG AAAGGTGGTGTCTTGCCGCA ATT TCTGGCACGACACCACCAAA TTTTTTGTGAATATC TERM 755 654162 - 654202 + g 80 -8.9 -3.76785 | opp_overlap 654164, overlap 654161 654163 TATTGGAAGATTAGA AAGGTGGTGTCTTGCCGCA ATT TCTGGCACGACACCACCAA ATTTTTTGTGAATAT TERM 756 654163 - 654201 + g 100 -12.4 -2.84986 | opp_overlap 654164, overlap 654162 654161 ATTGGAAGATTAGAA AGGTGGTGTCTTGCCGCA ATT TCTGGCACGACACCACCA AATTTTTTGTGAATA TERM 757 654200 - 654164 - G 100 -13.8 -4.06384 | opp_overlap 654163 654162 654161 TTGGAAGATTAGAAA GGTGGTGTCTTGCC GCAATTTCT GGCACGACACCACC AAATTTTTTGTGAAT clpX 655538 - 654315 - | ATP-dependent Clp protease, ATP-binding subunit ClpX TERM 758 655183 - 655160 - G 74 -6.8 -4.23758 | ACGGGACATCTAAAA TTTTTGCAAG TGTT CTTGCAAGAA GAGTTTTACCACTAC TERM 759 655789 - 655810 + r 100 -10.1 -5.75478 | opp_overlap 655789 655790, overlap 655790 CTCGGCACCAAAAAA TGGGGGCCA ATGT TGGCTCCCG TTTTTTTATATAATT TERM 760 655810 - 655789 - R 83 -5.7 -5.14563 | opp_overlap 655789 655790, overlap 655790 CTCGGCACCAAAAAA TGGGGGCCA ATGT TGGCTCCCG TTTTTTTATATAATT TERM 761 655809 - 655790 - R 80 -9.2 -3.68256 | opp_overlap 655789 655790, overlap 655789 TCGGCACCAAAAAAT GGGGGCCA ATGT TGGCTCCC GTTTTTTTATATAAT TERM 762 655790 - 655809 + r 100 -11.4 -4.02846 | opp_overlap 655790 655789, overlap 655789 TCGGCACCAAAAAAT GGGGGCCA ATGT TGGCTCCC GTTTTTTTATATAAT TERM 763 655814 - 655838 + r 81 -4.5 -5.42198 | TGTTGGCTCCCGTTT TTTTATATAAT TAG ATTAAATAAAA TTTTCTTTTTTAAGA THA_653 656964 - 656140 - | ABC transporter integral membrane protein, putative TERM 764 656513 - 656503 - G 70 -4 -4.99435 | TCCAAGAATTAAAAA CATT ATC AATG TGGGTGCATTTGGGA THA_654 657774 - 656968 - | hypothetical protein THA_655 658747 - 657749 - | ATPase component TERM 765 659114 - 659136 + r 83 -8 -4.27259 | opp_overlap 659108 659122 659123 ATTATAATATTAGAT TTTTTAAATT TAA AATTTAAAAA TTTTAACTGTATATG THA_656 659602 - 659123 - | hypothetical protein TERM 766 659190 - 659204 + g 80 -2.2 -5.77677 | overlap 659192 CCTGGTTTAGTTAAT TGTAAT CGA ATTATA TTTTTTGTTATTTTG TERM 767 659271 - 659296 + g 88 -3.3 -6.04419 | overlap 659272 TTTTTATTAAAAATT TTGGAGATTTC ATTC GAATTTTCCAG TTTTTTTGTTATTTT TERM 768 659705 - 659676 - R 73 -8 -3.55764 | gap 2, overlap 659674 659672 659679 AAAAATTAAAATATA GCATTGGCACGCTA GCTT TAGCGTGCCA--GC AAAAAAGTTTAATCA TERM 769 659704 - 659679 - R 88 -11.9 -2.87259 | overlap 659676 659674 659672 AATTAAAATATAGCA TTGGCACGCTA GCTT TAGCGTGCCAG CAAAAAAGTTTAATC THA_657 659839 - 659714 - | hypothetical protein TERM 770 662160 - 662191 + G 71 -7.6 -3.49169 | gap 1 GATGATCCTAAAAGT TTTGTTGAAAGACTT AGA AAG-CTTTCAATAAA TGTTATTAATCTTGA THA_658 660819 - 662306 + | putative signaling protein TERM 771 662384 - 662413 + F 100 -16.6 -5.63517 | opp_overlap 662377 662384 AGAGATAATGGAGAA GCCATATGCCAG AAAGAC CTGGCATATGGC TTTTTTGTTTGGAGG TERM 772 662413 - 662384 - f 100 -17.3 -3.46913 | opp_overlap 662384, overlap 662377 AGAGATAATGGAGAA GCCATATGCCAGA AAGA CCTGGCATATGGC TTTTTTGTTTGGAGG TERM 773 662934 - 662919 - g 72 -9 -3.04894 | overlap 662918 AATGCGGTTGAAAAC GGTGCA ATTT TGCACC TTGAAGAAGAGGTTT THA_659 662436 - 663872 + | anaerobic glycerol 3-phosphate dehydrogenase TERM 774 664584 - 664574 - g 86 -3.2 -5.83211 | GATGAAAACAAAAAA CCAA TTG CTGG GACTGAAAAGGTTAT TERM 775 665081 - 665067 - g 70 -5.7 -4.34402 | GCTTTGATAGTAAAA TCACC GTGGA GGTGA GCAGTCTTGATTAAA gidA1 663869 - 665095 + | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA THA_661 665088 - 665447 + | molybdopterin oxidoreductase, 4Fe-4S cluster-binding subunit TERM 776 666274 - 666284 + G 71 -6.8 -3.97139 | opp_overlap 666272 666274 ATACTTATGAACACA GGAG ATA CTCC TTATTATTCAAATTC glpK 665473 - 666942 + | glycerol kinase TERM 777 667322 - 667305 - g 93 -8.5 -5.09173 | GAACAGGTTAAAAAA CACAAAG CTAA CTTTGTG GAGGTTTTACCTGGT THA_663 666942 - 667493 + | glycerol uptake operon antiterminator regulatory protein THA_664 667638 - 668384 + | lipoprotein, putative TERM 778 668408 - 668425 + F 95 -11.3 -3.78934 | opp_overlap 668405 668403 AATGAAAAAATATTT TAGGGCC GGAA GGCCCTA TTATTATCGGGAGGG THA_665 668447 - 670039 + | OB-fold nucleic acid binding domain protein TERM 779 670066 - 670043 - f 74 -6.6 -4.20868 | opp_overlap 670044, overlap 670044 GTTTTAAAATAATAA TTGTGTCGCC TTTT GGCGGCACAT TTTAAAAAGTAACAG TERM 780 670044 - 670065 + F 100 -12.3 -4.09685 | opp_overlap 670043 670044 TTTTAAAATAATAAT TGTGTCGCC TTTT GGCGGCACA TTTTAAAAAGTAACA TERM 781 670065 - 670044 - f 81 -10.1 -3.11798 | opp_overlap 670044, overlap 670043 TTTTAAAATAATAAT TGTGTCGCC TTTT GGCGGCACA TTTTAAAAAGTAACA THA_666 670096 - 670983 + | thermonuclease, putative TERM 782 671138 - 671149 + F 70 -4.4 -4.77759 | TTTTTCAGGGGATTT TTCC AGGA GGAA TTTTTAATAAATTGT TERM 783 671328 - 671309 - f 82 -7.8 -4.56597 | opp_overlap 671310, overlap 671310 CCTCTCCGCCAAAAA GTGGGGGA TAGC TCCCCCAT TTTTAAATTAAATAA TERM 784 671327 - 671310 - f 88 -11.3 -3.33744 | opp_overlap 671310, overlap 671309 CTCTCCGCCAAAAAG TGGGGGA TAGC TCCCCCA TTTTTAAATTAAATA TERM 785 671310 - 671327 + F 100 -11.3 -4.75174 | opp_overlap 671310 671309 CTCTCCGCCAAAAAG TGGGGGA TAGC TCCCCCA TTTTTAAATTAAATA TERM 786 671430 - 671448 + F 95 -4.5 -6.11229 | opp_overlap 671430 GGCACGCCAAAAAAG GAGGCTA ATGCC TTGCCTC TTTTTTTATTTTAAT TERM 787 671861 - 671873 + F 82 -6.3 -5.09521 | opp_overlap 671860 671861, overlap 671845 ACTGCTGTCAATAAC TAGCA GTG TGCTA TTTTTAATTTCTTAC TERM 788 672420 - 672392 - f 78 -7 -4.52873 | gap 1, opp_overlap 672400, overlap 672394 672395 672400 TTTTGATAAAAATAA TACGAAAACGTTT TCGA AAACGTTTTC-TA GGAGGTGGGGGTTTG TERM 789 672419 - 672394 - f 74 -7.7 -3.86816 | opp_overlap 672400, overlap 672392 672395 672400 TTGATAAAAATAATA CGAAAACGTTT TCGA AAACGTTTTCT AGGAGGTGGGGGTTT TERM 790 672418 - 672395 - f 83 -11.2 -2.91005 | opp_overlap 672400, overlap 672394 672392 672400 TGATAAAAATAATAC GAAAACGTTT TCGA AAACGTTTTC TAGGAGGTGGGGGTT THA_669 672433 - 672819 + | high affinity ribose transport protein RbsD THA_670 672820 - 674298 + | ribose import ATP-binding protein RbsA TERM 791 675169 - 675198 + G 74 -6.5 -4.4078 | opp_overlap 675178 CATTTTATCAACAAG CAGTAAAAGGGAT TGTG ATCCTTATTGCTG TTTTAATTGAAAGAG THA_671 674295 - 675221 + | ribose transport system permease protein RbsC THA_672 675234 - 676103 + | D-ribose-binding protein TERM 792 676116 - 676128 + F 100 -10.5 -5.57729 | TAAAAACATTGTAAG GGGGG ATT CCCCC TTTTTTCTATTGTTT THA_673 676160 - 677152 + | transcriptional regulator, LacI family TERM 793 677144 - 677129 - f 76 -6.2 -4.58466 | TTGATAATTAGAAAA TCAACT AAGG AGTTGA AAAAATGATTGCAGT TERM 794 677971 - 677981 + G 71 -6.8 -3.97368 | overlap 677969 TTGGAATTTGCCTCA GCAG CAG CTGC TTTGTCAGTTACAAA rbsK 677149 - 678057 + | ribokinase TERM 795 678087 - 678051 - T 87 -10.3 -3.60818 | opp_overlap 678062, overlap 678053 678055 678062 TGAAAACTTTTTAAA TATATAAAAAAGGCGCA ATG CGCGCCTTTTTTAACTA CATTTACTCCAGCCA TERM 796 678084 - 678053 - T 85 -10.4 -3.37685 | gap 1, opp_overlap 678062, overlap 678051 678055 678062 AAAACTTTTTAAATA TATAAAAAAGGCGCA ATG CGCGCCTTTTTTA-A CTACATTTACTCCAG TERM 797 678083 - 678055 - T 100 -15.5 -3.24976 | opp_overlap 678062, overlap 678053 678051 678062 AACTTTTTAAATATA TAAAAAAGGCGCA ATG CGCGCCTTTTTTA ACTACATTTACTCCA TERM 798 678062 - 678076 + T 95 -8.5 -5.10497 | opp_overlap 678055 678053 678051 678062 TAAATATATAAAAAA GGCGC AATGC GCGCC TTTTTTAACTACATT TERM 799 678076 - 678062 - T 100 -9.2 -5.51046 | opp_overlap 678062, overlap 678055 678053 678051 TAAATATATAAAAAA GGCGCA ATG CGCGCC TTTTTTAACTACATT THA_675 680597 - 678081 - | ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent THA_676 681133 - 680615 - | anaerobic ribonucleoside-triphosphate reductase-related protein nrdD 683090 - 681135 - | anaerobic ribonucleoside-triphosphate reductase TERM 800 682119 - 682104 - G 72 -9 -3.03124 | opp_overlap 682103 TGTGAGCCTGCAACA CGATGC AACG GCATCG ATTGAATCGGAGATA TERM 801 683681 - 683641 - H 76 -9.8 -3.10071 | gap 1, opp_overlap 683609 683634, overlap 683679 AAACCTCAGCTAATA CCCCATACGTTCCTACCTG TGAG CAGGTAGGAA-GAAAGGGA GCGATAGCTCTGCTG TERM 802 684103 - 684085 - H 71 -6.6 -4.07687 | AGTCCGGTGTGAAAA CTCACGGC TCA ACCGTGGG ACTGCGCTGGAAACT TERM 803 685395 - 685417 + H 79 -10.6 -2.57344 | opp_overlap 685396, overlap 685394 AGGGGAGGAGCCTAA ACCAACGTGT AAT ACACGTTGGG GTTGTGGGACAAGTC TERM 804 685416 - 685396 - H 100 -14.1 -3.62096 | opp_overlap 685395 685394 GGGGAGGAGCCTAAA CCAACGTGT AAT ACACGTTGG GGTTGTGGGACAAGT TERM 805 686472 - 686444 - H 79 -10.3 -2.53164 | overlap 686443 686447 686462 CCAGGCATGAGTAAG CGAGAGGAGAG TGAGAAT CTCTCCCCCCG AAAGCCTAAGGGTAC TERM 806 687640 - 687624 - H 79 -7.3 -4.48221 | GATCAACGGACAAAA GTTACCC CGG GGATAAC AGGCTAGTCTTGCCC TERM 807 688291 - 688272 - H 78 -9.3 -3.3782 | opp_overlap 688272 TACCTATTTAATTAA CCTCTCC GAATAA GGAGAGG TTTTTTGTTTGTTTG TERM 808 688272 - 688291 + H 100 -9.3 -5.85425 | opp_overlap 688272 TACCTATTTAATTAA CCTCTCC GAATAA GGAGAGG TTTTTTGTTTGTTTG TERM 809 688583 - 688599 + G 72 -8.1 -3.34821 | overlap 688582 TCAAATTTTTTTGAA TGGTAAT GAT ATTACCA ATTTTAATGTTTTTG TERM 810 688869 - 688851 - g 70 -6.1 -4.08945 | opp_overlap 688840 ATTATTTTGTTAAAA CCAAAAT TTGTT ATTTTGG ATGAACCCGATTCTG THA_681 688395 - 689138 + | ABC transporter, ATP-binding protein THA_682 689128 - 690075 + | ABC transporter, ATP-binding protein TERM 811 690092 - 690118 + T 100 -10.2 -5.65496 | opp_overlap 690092 ATTTGTATTAAAAAA CATGACCTACGA TAG TTGCAGGTCATG TTTTTATTTTTAATG TERM 812 690118 - 690092 - T 100 -10.2 -5.14965 | opp_overlap 690092 ATTTGTATTAAAAAA CATGACCTACGA TAG TTGCAGGTCATG TTTTTATTTTTAATG THA_683 690484 - 690128 - | iron-molybdenum cofactor-binding protein TERM 813 690422 - 690410 - G 71 -3.4 -5.20154 | ATAGAATGCAAAAAA TGGT GAATG ACCA AAGTGTTCCGATATT THA_684 691160 - 690528 - | caax amino protease family iadA 691211 - 692308 + | beta-aspartyl peptidase TERM 814 692405 - 692391 - g 86 -7.2 -5.01553 | AAGGTACAAACAAAA TCAGAT GTC ATCTGA GCATATTTTACTTTC TERM 815 694165 - 694148 - g 71 -7.1 -3.8381 | ATAGAGAGGATGAAA TTTCTAC AACT GTAGAAA AAATAGTTAAAAACA THA_686 692308 - 694515 + | negative regulator of genetic competence ClpC/mecB TERM 816 695385 - 695399 + G 74 -8.6 -3.24747 | overlap 695387 AAGCAGGTATAGACT TTGGTG TTG CACCAA TTCCTGATCTAGAAA THA_687 694607 - 695782 + | maltose ABC transporter, periplasmic maltose-binding protein TERM 817 695803 - 695823 + F 83 -6.8 -4.82901 | opp_overlap 695791 695802 695803, overlap 695804 695814 AAACTGAATAAAATT CGGGGG AGTGTATTC CCCCCG TTTTTATCGGGAGGA TERM 818 695804 - 695821 + F 72 -9.1 -2.6933 | opp_overlap 695791 695803 695802, overlap 695803 695814 AACTGAATAAAATTC GGGGGAG TGTA TTCCCCC CGTTTTTATCGGGAG TERM 819 695884 - 695897 + G 72 -5.3 -4.81249 | GGCTATTTGTTGTTG GCATT GTTT AATGC TTTTTCAATTTGGGG THA_688 695845 - 697551 + | maltose transport system permease protein MalF THA_689 697551 - 699962 + | maltose transport system permease protein MalG TERM 820 699994 - 700028 + F 100 -17.4 -5.24129 | opp_overlap 699994 AGAATGTTTGAAAAA GTCCTCGGATGTTGTA CAA TATAATATCCGAGGAC TTTTTTCTAGGGAGG TERM 821 700028 - 699994 - f 100 -13 -4.60255 | opp_overlap 699994 AGAATGTTTGAAAAA GTCCTCGGATGTTGTA CAA TATAATATCCGAGGAC TTTTTTCTAGGGAGG THA_690 700050 - 701177 + | type I phosphodiesterase / nucleotide pyrophosphatase superfamily TERM 822 701499 - 701488 - g 88 -4.4 -5.76949 | GATTTTTAAAAAAAA CATC TGTA GATG CTAGCGAAGAAGAGT TERM 823 701666 - 701694 + G 100 -12.7 -3.70902 | opp_overlap 701665 701673 TAATTTTAAAGTTAC CTATAAAGAACCA AAG TGGTTTTTTATAG TTTGGATGTCAGCGG THA_691 701280 - 702803 + | clostripain-related protein TERM 824 702824 - 702843 + T 100 -10.8 -5.1675 | opp_overlap 702824 CATGAAAATAAAAAA GTGAAGCT TTGA AGCTTCAC TTTTTTGCTGGCTCC TERM 825 702843 - 702824 - T 100 -10.8 -5.83211 | opp_overlap 702824 CATGAAAATAAAAAA GTGAAGCT TTGA AGCTTCAC TTTTTTGCTGGCTCC THA_693 703513 - 703064 - | hypothetical protein nqrF 704630 - 703527 - | NADH:ubiquinone oxidoreductase, na translocating, f subunit TERM 826 704440 - 704414 - G 78 -10.3 -2.58249 | gap 1, overlap 704413 TACATGCCCCACAAC TTCC-TCTGCCT CCAC AGGCAGATGGAA CAAAGATATTTTCAG TERM 827 704465 - 704498 + g 100 -7.7 -5.67283 | gap 1, opp_overlap 704471 704476 TTTCAGAAGCAAGTG TAAAAAGTAAA-GGTG AAC CACCCTTTACTTTTAA TTTTTTCTTTCCATT TERM 828 704492 - 704471 - G 78 -6.7 -4.68506 | gap 1, opp_overlap 704465, overlap 704476 AAGCAAGTGTAAAAA GTAAA-GGTG AAC CACCCTTTAC TTTTAATTTTTTCTT TERM 829 704486 - 704476 - G 74 -6.8 -4.32649 | opp_overlap 704465, overlap 704471 AGTGTAAAAAGTAAA GGTG AAC CACC CTTTACTTTTAATTT THA_695 705234 - 704641 - | Na(+)-translocating NADH-quinone reductase subunit e (na(+)-translocating nqr subunit e) (na(+)-nqr subunit e) nqrD 705830 - 705231 - | NADH:ubiquinone oxidoreductase, na(+)-translocating, d subunit TERM 830 705796 - 705812 + g 72 -6.7 -4.10717 | opp_overlap 705796 GGGTTTTCATACCAA GTATTTT TCA AAAATAC TTCTTTAAATTTTTC THA_697 706434 - 705832 - | Na(+)-translocating NADH-quinone reductase subunit c (na(+)-translocating nqr subunit c) (na(+)-nqr subunit c), putative TERM 831 705947 - 705977 + g 78 -6.2 -4.76874 | opp_overlap 705953 705956, overlap 705953 GAAGAATTTTCTTTG TTAAAATCACTGGA AGC TCCAGAGACTTTGA TTTTGATTTTATCTT TERM 832 705971 - 705953 - G 75 -7.4 -4.07568 | opp_overlap 705953 705947, overlap 705956 TTTTCTTTGTTAAAA TCACTGGA AGC TCCAGAGA CTTTGATTTTGATTT TERM 833 706154 - 706179 + g 73 -9.3 -2.7242 | overlap 706151 CAAAGGCCGCTCCCA GAAAAAATATA TGAA TATATTTTTTC TCCATTTATAGTGGT THA_698 707321 - 706431 - | Na(+)-translocating NADH-quinone reductase subunit b (na(+)-translocating nqr subunit b) (na(+)-nqr subunit b) TERM 834 707383 - 707354 - R 95 -12.3 -3.61517 | opp_overlap 707359 707376, overlap 707359 ACGTTTTTTCAAGAA GAAAAGTCCAGGT TTTA ACCTGGACTTTTA AAAGAATTTATAAGT TERM 835 707359 - 707378 + r 100 -12.2 -4.10453 | opp_overlap 707354 707359, overlap 707376 TTTTCAAGAAGAAAA GTCCAGGT TTTA ACCTGGAC TTTTAAAAGAATTTA TERM 836 707378 - 707359 - R 100 -12.2 -4.89477 | opp_overlap 707359 707376, overlap 707354 TTTTCAAGAAGAAAA GTCCAGGT TTTA ACCTGGAC TTTTAAAAGAATTTA THA_699 707876 - 707400 - | rubrerythrin subfamily TERM 837 707441 - 707462 + g 71 -3.1 -5.2422 | gap 1, overlap 707444 TATCAAATTCATCGT CTT-CTCTTA ATC TAAGAGTGAG TTTTTTCATGTGCTT THA_700 708343 - 708789 + | 4Fe-4S binding domain protein TERM 838 708802 - 708818 + G 72 -4.5 -4.86731 | TAATAAAAATCTTAG CGAATTT GAA AAATTTG TTTTGTTTGAAAAAG msrA 708773 - 709651 + | peptide methionine sulfoxide reductase TERM 839 709745 - 709723 - g 73 -3.5 -5.27335 | overlap 709726 TCTTTTAAATAAAAA TAATGCTTT GCTTA AAAGCAATA AAAAGCTTGGTTCTA TERM 840 709742 - 709726 - g 72 -5.2 -4.72696 | overlap 709723 TTTAAATAAAAATAA TGCTTT GCTTA AAAGCA ATAAAAAGCTTGGTT TERM 841 710229 - 710213 - g 70 -5.1 -4.63486 | ACTTTTTCAAGAAAA CCAAAAG GAG CATTTGG ACCAGTAATTTTAAC THA_702 709667 - 710725 + | glycosyl transferase, group 2 family protein THA_703 710718 - 711308 + | membrane protein THA_704 711295 - 711738 + | hypothetical protein TERM 842 712498 - 712452 - gf 82 -9.9 -3.28924 | gap 1, opp_overlap 712470, overlap 712470 CACTGGGCGTGACAA CGGAAAG-TTATATAAAATTTT TAAG AAAACTTTAGATAAGCTTTCCG ATTCGCCTGAAATTT THA_705 711739 - 712734 + | retinol dehydrogenase 13, putative TERM 843 713029 - 713010 - gf 72 -5.8 -4.46493 | TCAAATATATTAAAA GAACTTTA TCCT CAAAGTTC GATTTACGTGGACAA THA_706 712686 - 714242 + | amine oxidase, flavin-containing superfamily THA_707 714247 - 715773 + | lipoprotein, putative THA_708 715774 - 716754 + | oxidase-related protein THA_709 716744 - 717700 + | hypothetical protein THA_710 719221 - 717797 - | diguanylate cyclase (ggdef) domain protein TERM 844 718245 - 718255 + g 72 -4 -5.15117 | GCTTTTGTTAGTGGA TCAA TTA TTGA TTTTTTGAAATTTTC TERM 845 719020 - 718984 - G 70 -8.3 -3.21126 | opp_overlap 718983 718992, overlap 718988 718992 AAGGATATTTATTAA TGTAGAAATTTATCTTT TCA AAAGAAAAATTTCTAAA ATCATTTACATCTAT TERM 846 719016 - 718988 - G 73 -9.1 -2.57423 | opp_overlap 718983 718992, overlap 718984 718992 ATATTTATTAATGTA GAAATTTATCTTT TCA AAAGAAAAATTTC TAAAATCATTTACAT TERM 847 719101 - 719083 - G 71 -6 -4.50976 | opp_overlap 719084, overlap 719084 TGTCACAGTATAAAA TTCTGGAA TTT TTCCAGAT TATAACGTTAGAATC TERM 848 719100 - 719084 - G 78 -9.5 -3.30104 | opp_overlap 719084, overlap 719083 GTCACAGTATAAAAT TCTGGAA TTT TTCCAGA TTATAACGTTAGAAT TERM 849 719084 - 719100 + g 78 -9.5 -3.36671 | opp_overlap 719083 719084 GTCACAGTATAAAAT TCTGGAA TTT TTCCAGA TTATAACGTTAGAAT TERM 850 719370 - 719360 - H 72 -2.6 -5.4505 | opp_overlap 719360 TTTGTTAACAAAAAA TTTA CAT TAAA ATTTTGAACTCCTCC THA_711 719445 - 721811 + | chaperone ClpB TERM 851 721836 - 721814 - f 85 -9.1 -4.03183 | opp_overlap 721815, overlap 721809 721815 ATTGACAAAATAGAA TGTGGCTCC AAGTA GGAGCCACT TTTTTTTATTTTAAA TERM 852 721815 - 721835 + F 100 -12.6 -6.34616 | opp_overlap 721814 721809 721815 TTGACAAAATAGAAT GTGGCTCC AAGTA GGAGCCAC TTTTTTTTATTTTAA TERM 853 721835 - 721815 - f 90 -12.6 -3.00825 | opp_overlap 721815, overlap 721814 721809 TTGACAAAATAGAAT GTGGCTCC AAGTA GGAGCCAC TTTTTTTTATTTTAA TERM 854 721925 - 721905 - g 74 -7 -4.26386 | opp_overlap 721898 GGAAAAAGCAAAGAA TTTTTGTC TTCCT GACAAAAA TGGTAAAATGCATTG THA_712 721888 - 722340 + | bacterioferritin comigratory protein THA_713 722423 - 722692 + | hypothetical protein TERM 855 722692 - 722726 + F 90 -10.8 -3.90744 | opp_overlap 722695, overlap 722694 722695 ATTAAGGTTTAACTA AAATTTAAGCCTCGGG TTT TCCGAGGCTTAAAATA TTATTTGAAAGACGC TERM 856 722694 - 722724 + F 100 -13.4 -3.54488 | opp_overlap 722695, overlap 722692 722695 TAAGGTTTAACTAAA ATTTAAGCCTCGGG TTT TCCGAGGCTTAAAA TATTATTTGAAAGAC TERM 857 722723 - 722695 - f 100 -16.2 -4.41895 | opp_overlap 722695 722694 722692 AAGGTTTAACTAAAA TTTAAGCCTCGG GTTTT CCGAGGCTTAAA ATATTATTTGAAAGA TERM 858 722695 - 722723 + F 100 -16.9 -2.72371 | opp_overlap 722695, overlap 722694 722692 AAGGTTTAACTAAAA TTTAAGCCTCGGG TTT TCCGAGGCTTAAA ATATTATTTGAAAGA TERM 859 722863 - 722889 + F 95 -10.4 -4.62069 | CTTTTCCTTTATTAT TTCTTTGAAAGA TAT TTTTTCAAAGAA TTTTTCAACTAAACA rluB 723902 - 724645 + | ribosomal large subunit pseudouridine synthase B galE 724646 - 725620 + | UDP-glucose 4-epimerase TERM 860 725684 - 725657 - g 74 -6.6 -4.21885 | gap 1 AGAAGAAATTAGAAA GGATATA-AATAA AAA TTATTTTATATCC GCATCAGCAGGAACT TERM 861 726679 - 726664 - g 71 -7.6 -3.49687 | overlap 726663 AGCGTGGAGAAAAAG TCCTTG CACT CAAGGA AAATTACAGATCTAA THA_717 725631 - 728756 + | ATP-dependent nuclease, subunit A, putative TERM 862 729374 - 729360 - g 72 -4.3 -5.13016 | opp_overlap 729360 AATCAAAACGAAAAA CACTT GTTGT AAGTG GTTTTTTTGATATAA TERM 863 730285 - 730275 - g 72 -6.8 -4.14874 | opp_overlap 730274 ACAACATGGGTAAAA CCTC GTG GAGG AATATGTTTAAAATT TERM 864 730417 - 730403 - g 73 -5.8 -4.52873 | opp_overlap 730400, overlap 730400 TTTGTAGAAAAAGAA TACAAA TTC TTTGTA AGTGCGGTAGATGGT THA_718 728753 - 731773 + | hypothetical protein THA_719 731884 - 732435 + | hypothetical protein TERM 865 733063 - 733025 - T 90 -4.7 -5.72053 | gap 2, opp_overlap 733025 GAACGAAATAAAAAA CACCCCC-GGA-AGTGATA AAA TATAACTATCTAGGGGGTG TTTTTCATTGGCAAA TERM 866 733025 - 733063 + T 83 -6.9 -4.8622 | gap 2, opp_overlap 733025 GAACGAAATAAAAAA CACCCCC-GGA-AGTGATA AAA TATAACTATCTAGGGGGTG TTTTTCATTGGCAAA TERM 867 733164 - 733151 - T 71 -5.3 -4.67982 | opp_overlap 733151 TTTCATTGAAGAAAA TCTTC CTAA GAAGA CTATTGCTTCTCTTT TERM 868 734165 - 734193 + T 77 -8.1 -3.91984 | opp_overlap 734165 GGCAAGGTTAAAAAA CATGGCTCCGGTG GAA TACCGAAACCATG TTGTTTGAAAAGTGT TERM 869 734193 - 734165 - T 100 -11.8 -5.09426 | opp_overlap 734165 GGCAAGGTTAAAAAA CATGGCTCCGGT GGAAT ACCGAAACCATG TTGTTTGAAAAGTGT TERM 870 734611 - 734574 - T 90 -12.2 -2.9155 | opp_overlap 734583, overlap 734583 GGCTTTAATATTAGA TTAAAAAAAGGTGCCC TTCTTG GGGCACCTTTTTTCAT TATTTGTTTACTTTT TERM 871 734583 - 734602 + T 100 -11.4 -5.4148 | opp_overlap 734574 734583 ATTAGATTAAAAAAA GGTGCCCT TCTT GGGGCACC TTTTTTCATTATTTG TERM 872 734602 - 734583 - T 100 -10.7 -5.59357 | opp_overlap 734583, overlap 734574 ATTAGATTAAAAAAA GGTGCCC TTCTTG GGGCACC TTTTTTCATTATTTG THA_722 734889 - 734611 - | DNA-binding protein HU 1 aroK 735504 - 735025 - | shikimate kinase THA_724 735914 - 735516 - | hypothetical protein TERM 873 736009 - 736023 + H 70 -7.2 -3.69434 | opp_overlap 736009, overlap 736009 TTATTATAATATAAA TGCAAA TGA TTTGCA TTTGCAATTACTTGG TERM 874 736029 - 736009 - H 83 -8.4 -4.29304 | opp_overlap 736009 736009 TTATTATAATATAAA TGCAAATG ATTTG CATTTGCA ATTACTTGGAGGGGA THA_725 736050 - 736430 + | ferric uptake regulation protein TERM 875 737057 - 737029 - g 78 -6.9 -4.6575 | ATAGAAACTATAAAA TCTGAAAATATTA TTG CAATATTTTCTGA GGTTCAACAATCAAA THA_726 736423 - 737214 + | putative periplasmic metal-binding protein THA_727 737201 - 737929 + | high-affinity zinc uptake system ATP-binding protein ZnuC THA_728 737916 - 738713 + | cation ABC transporter, permease protein TERM 876 738863 - 738881 + F 100 -8.1 -6.3578 | opp_overlap 738863 738864, overlap 738864 GAAAAGTTAAGAGAA TGGAGCC GATAA GGCTCCG TTTTTTTTTTACAAT TERM 877 738864 - 738880 + F 91 -9.4 -4.39028 | opp_overlap 738863 738864, overlap 738863 AAAAGTTAAGAGAAT GGAGCC GATAA GGCTCC GTTTTTTTTTTACAA TERM 878 738880 - 738864 - f 75 -9.4 -2.84203 | opp_overlap 738864 738863, overlap 738863 AAAAGTTAAGAGAAT GGAGCC GATAA GGCTCC GTTTTTTTTTTACAA TERM 879 739176 - 739142 - f 85 -8.1 -4.6575 | gap 1, opp_overlap 739150, overlap 739145 739150 ATAGAAAGTATAAAA TAGTAAAATTCCCAGG TTTT CCTGGGAATTTTT-TA TTAGTTAGATTTGAT TERM 880 739174 - 739145 - f 90 -12.3 -2.93822 | opp_overlap 739150, overlap 739142 739150 GAAAGTATAAAATAG TAAAATTCCCAGG TTTT CCTGGGAATTTTT TATTAGTTAGATTTG TERM 881 739150 - 739169 + F 100 -12.2 -5.5604 | opp_overlap 739145 739142 739150 TATAAAATAGTAAAA TTCCCAGG TTTT CCTGGGAA TTTTTTATTAGTTAG TERM 882 739169 - 739150 - f 100 -12.2 -4.58236 | opp_overlap 739150, overlap 739145 739142 TATAAAATAGTAAAA TTCCCAGG TTTT CCTGGGAA TTTTTTATTAGTTAG TERM 883 739255 - 739272 + F 75 -4.9 -5.02715 | GCCTTTTAATCTTAA TCGTGAA AAAT TTCATGA TTTTTGATTTGATGT TERM 884 740024 - 740012 - g 74 -6.3 -4.37092 | AGTTCCTGGAGAAAA TTTGC TTG GCAAA GAAGGACAAGGGTTT TERM 885 740103 - 740113 + G 74 -6.8 -4.25283 | overlap 740093 CAAGCCCTTGGGATT GCAC AAG GTGC TTTTGATGAAACAGT THA_730 739344 - 740483 + | acyl-CoA dehydrogenase, short-chain specific THA_731 740496 - 741278 + | electron transfer flavoprotein subunit beta THA_732 742988 - 743959 + | electron transfer flavoprotein subunit alpha TERM 886 744005 - 744029 + F 100 -11.5 -6.23545 | overlap 744006 TATAAATGAAGTTGT TTGCCTCTTCA ACG TGAAGAGGCAC TTTTTTTTCTTTGGA TERM 887 744006 - 744028 + F 100 -15 -4.31687 | overlap 744005 ATAAATGAAGTTGTT TGCCTCTTCA ACG TGAAGAGGCA CTTTTTTTTCTTTGG THA_733 744056 - 745414 + | MatE family member TERM 888 746052 - 746039 - g 76 -3.9 -5.48514 | opp_overlap 746039, overlap 746033 ATTAATAAAGAAAAA TTTTC AGTT GAAAA TATTGTTGACAAAGA THA_734 745436 - 746482 + | hypothetical protein TERM 889 746560 - 746533 - f 100 -13.6 -5.1963 | opp_overlap 746537 GGTAAGTAATAAAAA CAAATCGGGACT TTCA AGTCCCGATTTA TACAACAACTGGCTC TERM 890 746537 - 746556 + F 100 -12.2 -3.86015 | opp_overlap 746533 AGTAATAAAAACAAA TCGGGACT TTCA AGTCCCGA TTTATACAACAACTG TERM 891 746951 - 746981 + F 87 -11.3 -3.13773 | opp_overlap 746956, overlap 746956 GAACTTTGATTGTGC AAAAATGAGGAGC CTAAT GCTCCTCATTTTC ATTTTAAATGTGGAG TERM 892 746976 - 746956 - f 100 -11.2 -4.58395 | opp_overlap 746956 746951 TTGATTGTGCAAAAA TGAGGAGC CTAAT GCTCCTCA TTTTCATTTTAAATG TERM 893 746956 - 746976 + F 100 -11.2 -4.68645 | opp_overlap 746956, overlap 746951 TTGATTGTGCAAAAA TGAGGAGC CTAAT GCTCCTCA TTTTCATTTTAAATG purF 747004 - 748299 + | amidophosphoribosyltransferase purN 748263 - 748820 + | phosphoribosylglycinamide formyltransferase TERM 894 749287 - 749320 + G 72 -4.5 -4.8622 | opp_overlap 749281 749291 AAAGATAAATGATTA TGAACCAAAGGTAGG AAAA CCTGCATTTGGAGCA TTTTTAGTTGGCGAG THA_738 748844 - 749737 + | bifunctional purine biosynthesis protein PurH TERM 895 750737 - 750709 - g 78 -6.8 -4.55826 | opp_overlap 750716, overlap 750711 GGGAAAATATGAAAA GGGAAAAGAGAT AAGAA ATCTCTTTCCAC TTCAAGGAGAAGATT purD 749747 - 750940 + | phosphoribosylamine--glycine ligase purM 750937 - 751842 + | phosphoribosylformylglycinamidine cyclo-ligase TERM 896 751862 - 751882 + F 100 -11.2 -6.10295 | opp_overlap 751862 TTCCATTCAAAAAAA CATGGCTC TAGAC GAGCCATG TTTTTTTTATATTAA TERM 897 751882 - 751862 - f 100 -11.2 -5.47218 | opp_overlap 751862 TTCCATTCAAAAAAA CATGGCTC TAGAC GAGCCATG TTTTTTTTATATTAA TERM 898 751929 - 751946 + F 77 -4.2 -5.42514 | TTTGTATTTTATCTT TGAAGA CTTGAC TCTTCA TTTTTTGATTTATCC THA_741 752020 - 752148 + | hypothetical protein TERM 899 752988 - 752957 - T 79 -8.8 -3.9444 | gap 1, opp_overlap 752946 752957 752957, overlap 752946 TAAACTCGAACTAAA TTCGGGTCTGTGCAA GGA TTGC-CAGACCCACA AGTTTTCATTCCTCA TERM 900 753172 - 753150 - T 87 -10.6 -3.64103 | opp_overlap 753155, overlap 753153 TAGGTAGATTCTAAA CAAGACGCGA TTT TCGCGTATTG GAGGCATCCGAGAGC TERM 901 753155 - 753167 + T 74 -9.1 -3.02511 | opp_overlap 753153 753150 AGATTCTAAACAAGA CGCGA TTT TCGCG TATTGGAGGCATCCG THA_742 755676 - 754474 - | glycosyl transferase, group 1 family protein TERM 902 755507 - 755538 + g 71 -6.6 -3.91897 | opp_overlap 755511, overlap 755508 TCAGAAGGTTTGTGT AGAAGGCTTCTTAG AAGA TTTAGAAGCCTTCC TTTATCCCTGAACGC TERM 903 755508 - 755537 + g 77 -10.1 -2.94924 | opp_overlap 755511, overlap 755507 CAGAAGGTTTGTGTA GAAGGCTTCTTAG AAGA TTTAGAAGCCTTC CTTTATCCCTGAACG THA_743 757123 - 755705 - | wzx, putative THA_744 758180 - 757158 - | hypothetical protein TERM 904 757427 - 757442 + g 70 -9 -2.68532 | opp_overlap 757426, overlap 757441 TTTCGATGAGATCAT CCAGGA AAAT TCCTGG TACTATACCTTTCAG THA_745 759133 - 758177 - | putative glycosyltransferase protein TERM 905 758240 - 758250 + g 74 -5.4 -4.93547 | TCCTTTATCTATCAT GTCA AAG TGAC TTTTTAGTTCGTTCA TERM 906 758779 - 758795 + g 81 -6.5 -5.1244 | overlap 758780 GATTTTCTATGAACC CCTGGCA ACC TGCCAGA TTTTTATCTTCCTGA TERM 907 758780 - 758794 + g 83 -10 -3.6638 | overlap 758779 ATTTTCTATGAACCC CTGGCA ACC TGCCAG ATTTTTATCTTCCTG THA_746 760372 - 759140 - | glycosyl transferase, group 1 family protein TERM 908 761271 - 761325 + r 100 -11 -5.33866 | gap 1 ATGTATGATTCTCAT GGGCTACACCTCCTTGTAGATTTGT TCACAT ACAAATTT-TACTGAGGTGTAGCCC TTTTTTCTACCTTTA THA_747 761971 - 761309 - | hypothetical protein THA_748 762498 - 761974 - | hypothetical protein THA_749 763053 - 762556 - | transcriptional regulator TERM 909 762869 - 762859 - G 70 -8.2 -3.05463 | opp_overlap 762854 AGCCTTTTCAGCGAA CCCC TTT GGGG TTAGAATATATTTAA THA_750 764518 - 764360 - | hypothetical protein THA_751 765705 - 764950 - | hypothetical protein THA_752 766627 - 765692 - | ABC transporter ATP-binding protein THA_753 767906 - 766614 - | macrolide-efflux determinant TERM 910 766816 - 766802 - GR 83 -5.8 -5.27923 | overlap 766804 TAATCTGAGAAAAAA TTTCAA GCG TTGAAA AAACTCTTGACCTTA THA_754 768783 - 767881 - | hypothetical protein THA_755 769150 - 768776 - | hypothetical protein TERM 911 769209 - 769219 + H 71 -5.4 -4.72986 | AAAATAATTAAATCG GCAA TTT TTGC TTTTTAATACAAATG TERM 912 769494 - 769513 + H 100 -9.3 -5.50723 | CCGCCGTTGGCTCCA TTCCCCC GTTGAA GGGGGAA TTTTTGTTTTGGTAA THA_757 769550 - 770854 + | Spo0B-associated GTP-binding protein TERM 913 770960 - 770929 - gf 70 -6 -4.25347 | opp_overlap 770937, overlap 770937 AATTAGTAAGAGAAA TGTTTAAATATGCA GATA TGCATATTGTAACA AGTTCAACACCTCCT TERM 914 771131 - 771162 + GF 81 -4.5 -5.47159 | opp_overlap 771133, overlap 771133 CGAAAAATATTACGA AAGCATCTTCTTT TTGGTC GGAGAAGATGCTC TTTTTTCTATTGAAA TERM 915 771133 - 771160 + GF 79 -7.1 -4.36863 | opp_overlap 771133, overlap 771131 AAAAATATTACGAAA GCATCTTCTTT TTGGTC GGAGAAGATGC TCTTTTTTCTATTGA nadD 770805 - 771431 + | nicotinate (nicotinamide) nucleotide adenylyltransferase TERM 916 771735 - 771721 - g 85 -5.6 -5.4477 | opp_overlap 771720 AAAGTTGTAAAAAAA GGTGCT GGT AGCGCC CTATTAAAAGATCTA TERM 917 771936 - 771967 + G 70 -6.1 -4.1891 | CTCTGGAAAGGCTAC GTGGAATATAA AAAACAAAGG TTATATTCCAC TTTATATTAACGGAG nifR 771421 - 772311 + | NifR3 family protein THA_760 772385 - 773362 + | polysaccharide deacetylase family protein THA_761 773376 - 774497 + | aspartate aminotransferase TERM 918 774495 - 774514 + F 91 -7.2 -5.31275 | gap 1, opp_overlap 774498, overlap 774498 AAAGAGTTTTTAGAA TAA-GGGCC ATT GGCCCTTTA TTTTTTGTGGTAGAA TERM 919 774498 - 774510 + F 100 -10.5 -5.1471 | opp_overlap 774498, overlap 774495 GAGTTTTTAGAATAA GGGCC ATT GGCCC TTTATTTTTTGTGGT TERM 920 774510 - 774498 - f 89 -10.5 -3.7941 | opp_overlap 774495 774498 GAGTTTTTAGAATAA GGGCC ATT GGCCC TTTATTTTTTGTGGT THA_762 774549 - 775229 + | probable 2-phosphosulfolactate phosphatase THA_763 775235 - 776131 + | hypothetical protein THA_764 776112 - 776687 + | hydroxyacylglutathione hydrolase THA_765 776691 - 778598 + | penicillin-binding protein, class 1A THA_766 778600 - 779139 + | hypothetical protein TERM 921 779161 - 779186 + T 100 -7.6 -5.51402 | opp_overlap 779160, overlap 779163 AATATTAACTAAATT TTGAGCATCC AATCTA GGATGCTCTA TTTTTTTAAATATAT TERM 922 779163 - 779184 + T 93 -10.2 -4.38666 | opp_overlap 779160, overlap 779161 TATTAACTAAATTTT GAGCATCC AATCTA GGATGCTC TATTTTTTTAAATAT TERM 923 779214 - 779226 + T 88 -3.5 -6.01725 | overlap 779223 TATGGCTTTTTATGT TTTAA CTT TTAAA TTTTTTATTTTTCTT TERM 924 779223 - 779233 + T 72 -2.6 -5.40464 | overlap 779214 TTATGTTTTAACTTT TAAA TTT TTTA TTTTTCTTTATACTA THA_768 780831 - 780010 - | integrase, catalytic region THA_770 782299 - 783288 + | ABC-type dipeptide/oligopeptide/nickel transport systems, permease component TERM 925 783435 - 783417 - g 78 -10.4 -2.56747 | overlap 783416 783414 GATCCACTAGAATAT GTTGGTAT GGG ATACCAAC CTCCAAGCAAAGAAT THA_771 783288 - 784130 + | ABC-type dipeptide/oligopeptide/nickel transport systems, permease component THA_772 784153 - 785109 + | ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component TERM 926 785713 - 785749 + G 70 -8.9 -2.50077 | opp_overlap 785713, overlap 785712 ATTATTTATAACGCA TGATTTATCACTTGGAT ATT ATACAAGTGATAAGACA ATAATTTTATACAGA THA_773 785102 - 786019 + | oligopeptide ABC transporter, ATP-binding protein THA_774 786039 - 787013 + | hypothetical protein THA_775 787037 - 788434 + | beta-galactosidase TERM 927 789184 - 789162 - g 77 -7.8 -4.10429 | AAGCATGGTTTAAAA TTTACAGCTA TTT TTGCTGTAAA TGACTGGGCATCGAT THA_776 788454 - 789458 + | transcriptional regulator, LacI family TERM 928 790485 - 790503 + F 100 -13.2 -5.9218 | opp_overlap 790489 ATATTTGCTTTTTAA TCCAGCCA ATA TGGCTGGA TTTTTTTGTTGTATA THA_778 790552 - 790995 + | nucleoside diphosphate kinase TERM 929 790998 - 791018 + T 93 -6.9 -5.43866 | opp_overlap 790989 790998 AGATGATATTTAAAA TAAGTAGCA GAG TGCCACTTA TTTTTTTGAAAATTC TERM 930 791018 - 790998 - T 88 -9.1 -4.2535 | opp_overlap 790998, overlap 790989 AGATGATATTTAAAA TAAGTAGCA GAG TGCCACTTA TTTTTTTGAAAATTC TERM 931 791111 - 791087 - T 86 -7.3 -4.84918 | overlap 791088 TTGATAAATATAAAA GGTATAAAAAG TCG CTTTTTATACT AACGCCATTAAGTTG TERM 932 791110 - 791088 - T 87 -10.8 -3.49866 | overlap 791087 TGATAAATATAAAAG GTATAAAAAG TCG CTTTTTATAC TAACGCCATTAAGTT THA_779 792114 - 791152 - | hypothetical protein THA_780 793288 - 792131 - | hypothetical protein TERM 933 792450 - 792464 + g 75 -7.2 -4.14945 | GCTATTTTTTCAATT TCAGTT AGA AACTGA TTTAATTCTTCTTCA TERM 934 793105 - 793127 + g 83 -7.8 -4.64423 | opp_overlap 793108 GTAATATCAATGATT CAACAAACCA AAT TGGTTTTTTG TTTATCTTTTTGTTG TERM 935 793178 - 793153 - G 78 -3.3 -5.60993 | opp_overlap 793132 793157, overlap 793156 793157 TGTTGTATAAAAAAA GAATTTCACCA TTTT TGGTGAATTTA ATCGACATTGTTTTA TERM 936 793175 - 793156 - G 74 -5 -4.89054 | opp_overlap 793157, overlap 793153 793157 TGTATAAAAAAAGAA TTTCACCA TTTT TGGTGAAT TTAATCGACATTGTT TERM 937 793157 - 793174 + g 77 -8.5 -3.75015 | opp_overlap 793156 793153 793157 GTATAAAAAAAGAAT TTCACCA TTTT TGGTGAA TTTAATCGACATTGT TERM 938 793174 - 793157 - G 73 -8.5 -3.51806 | opp_overlap 793157, overlap 793156 793153 GTATAAAAAAAGAAT TTCACCA TTTT TGGTGAA TTTAATCGACATTGT THA_781 793910 - 793278 - | hypothetical protein TERM 939 793766 - 793800 + g 72 -4.4 -5.06052 | opp_overlap 793767 793768 793771 793777, overlap 793767 793768 793774 793777 GAACAATCAAGCCAA ACTGAGAATAAGGATA GCC TATCCTTATTCTAAAA TTTTCTATTTTTTCA TERM 940 793799 - 793767 - G 86 -10.1 -3.827 | opp_overlap 793766 793767 793768 793774 793777, overlap 793768 793771 793777 AACAATCAAGCCAAA CTGAGAATAAGGATA GCC TATCCTTATTCTAAA ATTTTCTATTTTTTC TERM 941 793767 - 793799 + g 72 -7.9 -3.61191 | opp_overlap 793767 793768 793771 793777, overlap 793766 793768 793774 793777 AACAATCAAGCCAAA CTGAGAATAAGGATA GCC TATCCTTATTCTAAA ATTTTCTATTTTTTC TERM 942 793798 - 793768 - G 85 -11.4 -2.88536 | opp_overlap 793767 793766 793768 793774 793777, overlap 793767 793771 793777 ACAATCAAGCCAAAC TGAGAATAAGGATA GCC TATCCTTATTCTAA AATTTTCTATTTTTT TERM 943 793768 - 793798 + g 85 -11.4 -2.74275 | opp_overlap 793768 793767 793771 793777, overlap 793767 793766 793774 793777 ACAATCAAGCCAAAC TGAGAATAAGGATA GCC TATCCTTATTCTAA AATTTTCTATTTTTT TERM 944 793795 - 793771 - G 100 -13.1 -2.68338 | opp_overlap 793768 793767 793766 793774 793777, overlap 793768 793767 793777 ATCAAGCCAAACTGA GAATAAGGATA GCC TATCCTTATTC TAAAATTTTCTATTT TERM 945 793774 - 793792 + g 76 -9 -3.43437 | opp_overlap 793771 793768 793767 793777, overlap 793768 793767 793766 793777 AAGCCAAACTGAGAA TAAGGATA GCC TATCCTTA TTCTAAAATTTTCTA TERM 946 793947 - 793937 - H 75 -2.6 -5.52384 | opp_overlap 793937 CCTTTACCAAAAAAA TTAT ATC ATAA ATTATAACCCAATGG THA_782 794577 - 794804 + | Fe-hydrogenase, subunit alpha TERM 947 796054 - 796038 - g 70 -3.7 -5.06735 | overlap 796032 TATAAATTACAAAAA TAAAGCA GCT CGCCTTA CTTTTATGAGTTTAT THA_783 794806 - 796410 + | ferredoxin 2 THA_784 796397 - 797536 + | stage II sporulation E family protein THA_785 797548 - 798021 + | Fe-hydrogenase gamma subunit TERM 948 798477 - 798448 - g 70 -5.1 -4.59511 | gap 1, opp_overlap 798451 798453 AACATTCTTTAAAAA CCAA-ACCTTCTAC ATT ATGGAAGGTATTGG TACGAGTGAATGTAA THA_786 798023 - 799897 + | Fe-hydrogenase, subunit beta TERM 949 799955 - 799967 + G 70 -6.3 -4.09739 | opp_overlap 799954 ACTATAATAAAGGAT GATTC AAG GAATC TTTTAGAGGCATTAA THA_787 799913 - 801889 + | hydrogenase-1 TERM 950 802069 - 802059 - g 70 -5.4 -4.61284 | AACATTAAAGGAAAA CCAA AGG TTGG CTATCATATCCCTCC TERM 951 802256 - 802276 + G 100 -11.2 -4.82901 | GATTGGAAGCTTTGT GGGAGAAC TCTCC GTTCTCCC TTTTTCTGAAGAAAA TERM 952 802473 - 802494 + G 85 -10.3 -3.61517 | opp_overlap 802471 802491 CAAGATATAACTACG GGTGTTTTA ACAA TAAAACACC TTCTTGAAAAAAAGT THA_788 801867 - 802511 + | redox-sensing transcriptional repressor rex 2 THA_789 802626 - 802468 - | hypothetical protein TERM 953 802652 - 802624 - G 79 -8.1 -3.91984 | opp_overlap 802624 ACACTTTTCAAACAA CATGGTTTCGGTA TTC CACCGGAGCCATG TTTTTTAACCTTGCC TERM 954 802624 - 802652 + g 100 -11.8 -5.09426 | opp_overlap 802624 ACACTTTTCAAACAA CATGGTTTCGGT ATTCC ACCGGAGCCATG TTTTTTAACCTTGCC TERM 955 803653 - 803666 + r 71 -5.3 -4.67982 | opp_overlap 803653 AAAGAGAAGCAATAG TCTTC TTAG GAAGA TTTTCTTCAATGAAA TERM 956 803792 - 803754 - R 83 -6.9 -4.8622 | gap 2, opp_overlap 803754 TTTGCCAATGAAAAA CACCCCCTAGATAGTTATA TTT TATCACT-TCC-GGGGGTG TTTTTTATTTCGTTC TERM 957 803754 - 803792 + r 90 -4.7 -5.72053 | gap 2, opp_overlap 803754 TTTGCCAATGAAAAA CACCCCCTAGATAGTTATA TTT TATCACT-TCC-GGGGGTG TTTTTTATTTCGTTC THA_790 805389 - 803845 - | UDP-N-acetylmuramyl pentapeptide synthase TERM 958 804100 - 804116 + g 80 -2.2 -5.70761 | opp_overlap 804100 ACCAAGTTCTACAAA TCCTGG AGTTA CAAGGA TTTTTCTTTTGTTTT TERM 959 805365 - 805355 - G 70 -4 -4.91084 | GATCTAATAACAAAA TTAG CAG CTAA AAGTGATAGAAATAC THA_791 806140 - 805382 - | carboxylesterase BioH TERM 960 805698 - 805722 + g 81 -7.3 -4.60889 | AGTTTTTCAAGACTT TTTTTTAGACC AAA GGTATAAAAAA TTTTTGCAAGTAGTT TERM 961 805751 - 805768 + g 76 -2.8 -5.54885 | opp_overlap 805744 805751 TTTATAAGTAAAAAT TTTAAG TCTAGT CTTAAA TTTTTTCTTAGTCTT TERM 962 805814 - 805829 + g 74 -5.4 -4.87893 | AATTATAACAACTTT CTCAAG CCAA CTTGGG TTTTTGCTTGCAATT THA_792 807240 - 806137 - | D-alanine--D-alanine ligase TERM 963 806496 - 806511 + g 93 -4.8 -6.08342 | ATTTTTCGTTGTAAT CAAAAA AATC TTTTTG TTTTTTTATTTCTTC TERM 964 807163 - 807179 + g 74 -8 -3.80174 | opp_overlap 807163 807162 807165 TTTATCAACAAAACT CAGCAC TTGAT GTGCTG TTATTATAGAGATCT THA_793 807906 - 807253 - | MTA/SAH nucleosidase THA_794 808373 - 807906 - | CheY-P phosphatase CheX THA_795 809134 - 808358 - | GTP-binding protein TERM 965 808729 - 808743 + g 76 -6.4 -4.66264 | opp_overlap 808716 808714 GACCCCTTGTAATTC CAGGAG CCA TTCCTG TTTTTGCAAGTTTTC TERM 966 808743 - 808768 + g 75 -5.5 -4.73677 | overlap 808750 CCAGGAGCCATTCCT GTTTTTGCAAG TTTT CTTCCAGAAAC TTTGTTTATTATAGA TERM 967 808851 - 808862 + g 71 -3 -5.25735 | overlap 808858 TTTTCTTTTGAATAG GTTT TAAT AAAC TTTTTAATTTTTTCA pyrH 809836 - 809135 - | uridylate kinase THA_797 812296 - 809840 - | hypothetical protein TERM 968 810227 - 810249 + g 91 -8.6 -4.74518 | opp_overlap 810227 ATAAGTTTCAACGTA TTCTTCAAGA TTT TTTTGAAGAA TTTGTTTTGATACTT THA_798 812847 - 812290 - | hypothetical protein THA_799 814095 - 812863 - | PhoH family protein THA_800 814655 - 814095 - | DNA polymerase III PolC-type TERM 969 814242 - 814252 + g 74 -5.4 -4.98468 | opp_overlap 814242 AAATTCTTTTACAAG GCTT TCC AAGC TTCTTTTTTTATTGT fliG 815677 - 814667 - | flagellar motor switch protein FliG fliF 817286 - 815682 - | flagellar M-ring protein FliF TERM 970 815949 - 815937 - G 75 -4.9 -5.02476 | ATATGTTCCAAAAAA TACAA GAA TTGTA GCAATTAAAAGTAAA THA_803 818271 - 817297 - | transglycosylase SLT domain protein THA_804 818326 - 818877 + | hypothetical protein rpmF 818903 - 819085 + | ribosomal protein L32 plsX 819088 - 820071 + | fatty acid/phospholipid synthesis protein PlsX TERM 971 820951 - 820932 - g 82 -5 -5.42198 | opp_overlap 820939 GTTGAAAAAATAAAA CTTGTTGC TTGT GGAACAAG TTATCATGCTGGGCT TERM 972 821275 - 821295 + G 91 -9.9 -4.07568 | ATCAACTTGTTGTTT TATACATTC TTG GAATGTATA TTTTAAAAGAACAAA glmS 820059 - 821864 + | glutamine-fructose-6-phosphate transaminase (isomerizing) TERM 973 821920 - 821954 + T 100 -15.8 -5.44198 | opp_overlap 821923, overlap 821923 TTTTATTTTTAAATC AAAGCCCCCCAATAGT TTT ACTATCGGGGGGCTTG TTTTTGTTATTTGTT TERM 974 821951 - 821923 - T 100 -19.7 -4.06502 | opp_overlap 821920 821923 TATTTTTAAATCAAA GCCCCCCAATAGT TTT ACTATCGGGGGGC TTGTTTTTGTTATTT TERM 975 821923 - 821951 + T 100 -17.5 -4.74161 | opp_overlap 821923, overlap 821920 TATTTTTAAATCAAA GCCCCCCAATAGT TTT ACTATCGGGGGGC TTGTTTTTGTTATTT THA_808 823436 - 821961 - | peptidase M16 inactive domain family TERM 976 822500 - 822512 + g 72 -6.3 -4.32857 | opp_overlap 822500 CCATTAAAAATGCAA CTCTA TCG TAGAG TTTATCTTTAAAGAA TERM 977 823301 - 823315 + g 76 -3.6 -5.42198 | TTTCATATTCAGGTA TTTCTA TTG TAGGAA TTTTATTTTTTGCAC THA_809 824759 - 823449 - | zinc protease TERM 978 823643 - 823661 + g 78 -3.2 -5.61824 | opp_overlap 823647, overlap 823647 CTTTTTGTGCAAATA TAAGTGAT TTA ATCATTTG TTTTTTTACCTTTTG TERM 979 823647 - 823657 + g 75 -4 -5.21683 | opp_overlap 823647, overlap 823643 TTGTGCAAATATAAG TGAT TTA ATCA TTTGTTTTTTTACCT TERM 980 824897 - 824884 - R 72 -2.5 -5.34381 | overlap 824874 AAATGTAAATAAAAA TAAAT CTTT ATTTA AATATTTTTCATCTG TERM 981 824963 - 824991 + r 79 -7.4 -4.53648 | opp_overlap 824965, overlap 824958 824965 ATGGCCTAAATGAAA AATGGCCCTTGC ATTAA GCAAGAGCCATA TTTATATTTTCTATA TERM 982 824989 - 824965 - R 100 -12.2 -4.98531 | opp_overlap 824963 824958 824965 GGCCTAAATGAAAAA TGGCCCTTGC ATTAA GCAAGAGCCA TATTTATATTTTCTA TERM 983 824965 - 824989 + r 87 -10 -3.85066 | opp_overlap 824965, overlap 824963 824958 GGCCTAAATGAAAAA TGGCCCTTGC ATTAA GCAAGAGCCA TATTTATATTTTCTA flgG 825805 - 825020 - | flagellar basal-body rod protein FlgG THA_811 826525 - 825818 - | flagellar basal-body rod protein FlgF mreB 827552 - 826545 - | rod shape-determining protein MreB THA_813 827667 - 827539 - | hypothetical protein THA_814 828727 - 827918 - | Na(+)-translocating NADH-quinone reductase subunit b (na(+)-translocating nqr subunit b) (na(+)-nqr subunit b) TERM 984 828264 - 828248 - G 71 -2.3 -5.46698 | opp_overlap 828248 TCTAAAACCAAAAAA TAAATCT TTA AGATTTG TCAATTTTCCAGAAT TERM 985 829403 - 829389 - g 71 -7.2 -3.83744 | GCATTTAAAGAAAGA TGAAGT TTT ACTTCA AAATGGTAGATATAG THA_815 829324 - 829869 + | MutT/nudix family protein THA_816 829871 - 830071 + | hypothetical protein TERM 986 830080 - 830097 + T 100 -11.3 -5.10767 | opp_overlap 830080 TGCTTAAATAATAAA GGAGGGT GTGC ACCCTCC TTTTTATATTAAATG TERM 987 830097 - 830080 - T 100 -11.3 -4.56978 | opp_overlap 830080 TGCTTAAATAATAAA GGAGGGT GTGC ACCCTCC TTTTTATATTAAATG THA_817 831339 - 830101 - | hypothetical protein THA_818 831823 - 832644 + | integrase, catalytic region THA_819 833217 - 833366 + | hypothetical protein THA_820 833576 - 833710 + | hypothetical protein THA_821 833892 - 835193 + | hypothetical coenzyme PQQ synthesis protein THA_822 835177 - 836787 + | ABC transporter, ATP-binding protein THA_823 836856 - 836993 + | hypothetical protein TERM 988 837108 - 837120 + F 86 -4.1 -5.72254 | ATTCCGCAATAAAAC TTTGC CAC GCGAA TTTTTTATTGTTTAC THA_824 837564 - 838865 + | hcp hydroxylamine reductase TERM 989 838873 - 838902 + T 100 -9.3 -5.63504 | opp_overlap 838861 838877, overlap 838877 AAATTTAAGAATTTA AAAATGAGGCACC AAAT GGTGCCTCATTGA TTTTTTTCTAACGTT TERM 990 838898 - 838877 - T 100 -14.5 -4.8143 | opp_overlap 838873 838877 TTAAGAATTTAAAAA TGAGGCACC AAAT GGTGCCTCA TTGATTTTTTTCTAA TERM 991 838877 - 838898 + T 100 -14.5 -4.08806 | opp_overlap 838877, overlap 838873 TTAAGAATTTAAAAA TGAGGCACC AAAT GGTGCCTCA TTGATTTTTTTCTAA THA_825 840231 - 838921 - | alkaline phosphatase 4 dnaB1 841018 - 842361 + | replicative DNA helicase coaD1 842361 - 842858 + | pantetheine-phosphate adenylyltransferase TERM 992 842905 - 842932 + G 70 -6.4 -4.16943 | TACTGTAGTTTCTTT TTCTATTCCGGT GTTT ATAGGAATAGAA TTTTCGAATATCCCA THA_828 842864 - 843361 + | hypothetical protein THA_829 843375 - 843878 + | hypothetical protein TERM 993 843920 - 843883 - T 100 -14.4 -3.63744 | opp_overlap 843889 843893, overlap 843889 843893 TTGCGTTTTAAAACA TAAGAATAAAGCGGGC GAAAAT GCCCGCTTTATTTTTA ATAACAATTTTGAAG TERM 994 843889 - 843914 + T 100 -14.1 -4.73388 | opp_overlap 843889 843883 843893, overlap 843893 TTTAAAACATAAGAA TAAAGCGGGCG AAAA TGCCCGCTTTA TTTTTAATAACAATT TERM 995 843914 - 843889 - T 100 -13.4 -4.09656 | opp_overlap 843889 843893, overlap 843883 843893 TTTAAAACATAAGAA TAAAGCGGGC GAAAAT GCCCGCTTTA TTTTTAATAACAATT TERM 996 843910 - 843893 - T 93 -9.8 -4.58859 | opp_overlap 843889 843893, overlap 843889 843883 AAACATAAGAATAAA GCGGGC GAAAAT GCCCGC TTTATTTTTAATAAC TERM 997 843893 - 843910 + T 100 -10.5 -4.91852 | opp_overlap 843893 843889 843883, overlap 843889 AAACATAAGAATAAA GCGGGCG AAAA TGCCCGC TTTATTTTTAATAAC THA_830 844691 - 843918 - | membrane spanning protein THA_831 845200 - 844691 - | hypothetical protein TERM 998 845240 - 845257 + H 72 -2.8 -5.41746 | opp_overlap 845240 845255 AACAATAATATTATA TCATTT AATATC AAATGA TTTTTTTCAAAAATT THA_832 845385 - 846731 + | putative symporter TERM 999 846752 - 846729 - T 100 -14 -5.60864 | opp_overlap 846729 GAGATATTAAAAAAA TGAAGGTGCT TGAA AGCACCTTCA TTTATTTTCTTAAAC TERM 1000 846729 - 846752 + T 100 -14 -4.87892 | opp_overlap 846729 GAGATATTAAAAAAA TGAAGGTGCT TGAA AGCACCTTCA TTTATTTTCTTAAAC ileS 849486 - 846754 - | isoleucyl-tRNA synthetase TERM 1001 849563 - 849532 - R 87 -10.3 -3.57418 | opp_overlap 849539, overlap 849539 TAGGTATTAAATTAA CAAAAAAGGTGGC CCTCCC GCCACCTTTTTTT GTCTGGGGAGGGCAA TERM 1002 849556 - 849539 - R 100 -8.4 -5.59655 | opp_overlap 849539, overlap 849532 TAAATTAACAAAAAA GGTGGC CCTCCC GCCACC TTTTTTTGTCTGGGG TERM 1003 849539 - 849556 + r 100 -8.4 -5.71712 | opp_overlap 849539 849532 TAAATTAACAAAAAA GGTGGC CCTCCC GCCACC TTTTTTTGTCTGGGG THA_834 849942 - 849583 - | transcriptional regulatory protein ResD pulA 852525 - 849991 - | pullulanase, type I TERM 1004 852008 - 852018 + g 71 -3.2 -5.186 | opp_overlap 852003, overlap 852003 GTTTCTGAAAGATCT GTAG GAT CTGC TTTTTCTATCTTTTC THA_836 854542 - 852542 - | maltodextrin glycosyltransferase TERM 1005 852842 - 852860 + g 70 -5.4 -4.56597 | opp_overlap 852831, overlap 852844 AAAGTCTTCGTATTT TTTTCTAT AAA ATAGAAGA TTTTTCAAGAAAGAA THA_837 855192 - 854614 - | transcriptional regulator, TetR family, putative TERM 1006 855038 - 855049 + g 71 -3 -5.3167 | opp_overlap 855038 ATTTTTTTAAAACAT TCTA TGTA TAGA TTTTCTTTATTTTTA THA_838 855990 - 855193 - | hypothetical protein TERM 1007 855363 - 855353 - G 72 -4 -5.10077 | opp_overlap 855353 AAATACCTTAAAAAA GAAA ATT TTTC GTTTGCACTTCCTAG THA_839 856803 - 856006 - | hypothetical protein TERM 1008 858671 - 858637 - g 77 -9.6 -2.90763 | TCTATATCTCATATA TCTTTGTAAAAAATTC TAA GAATTTTTCAGAAAGA ATAGTAACACTAGGA THA_841 857796 - 859778 + | membrane associated methyl-accepting chemotaxis protein, putative TERM 1009 859796 - 859776 - T 82 -11.2 -2.6072 | opp_overlap 859776, overlap 859773 GAGTTAAGTAATTTA TAGGGGGA TAATT TCCCCCTA TTTTTTTAAAGATTA TERM 1010 859776 - 859796 + T 100 -11.2 -5.43866 | opp_overlap 859776 859773 GAGTTAAGTAATTTA TAGGGGGA TAATT TCCCCCTA TTTTTTTAAAGATTA THA_842 860923 - 859802 - | ROK family protein THA_843 862134 - 860920 - | glycosyl transferase, group 1 TERM 1011 860969 - 860994 + g 74 -6.3 -4.45577 | opp_overlap 860972 CTTTTTAGATGTGAA GTAGTTAAAAA TTTC TCTTTAACTAC TTTTCTAGCGTTTCT THA_844 862474 - 863718 + | trehalose/maltose binding protein TERM 1012 863748 - 863716 - f 93 -10.8 -4.07687 | gap 1, opp_overlap 863721, overlap 863720 863721 ATGTTGCTTGGAAAA TAAATTTGTGGGGGA CTTT CCCCCCAC-AATTTA TAAAGAGGTGAGTAT TERM 1013 863745 - 863720 - f 93 -9.7 -4.64861 | opp_overlap 863721, overlap 863716 863721 TGCTTGGAAAATAAA TTTGTGGGGGA CTTT CCCCCCACAAT TTATAAAGAGGTGAG TERM 1014 863744 - 863721 - f 100 -13.2 -3.38435 | opp_overlap 863721, overlap 863720 863716 GCTTGGAAAATAAAT TTGTGGGGGA CTTT CCCCCCACAA TTTATAAAGAGGTGA TERM 1015 863721 - 863744 + F 100 -12.5 -3.86346 | opp_overlap 863721 863720 863716 GCTTGGAAAATAAAT TTGTGGGGG ACTTTC CCCCCACAA TTTATAAAGAGGTGA THA_845 863764 - 864645 + | maltose transport system permease protein MalF TERM 1016 865073 - 865057 - g 71 -4.5 -4.82901 | opp_overlap 865057 TTCTTTTGAGAAAAA TGCATTT AAT AAATACA TATCCTGGTTTGATA TERM 1017 865269 - 865289 + G 78 -4.1 -5.35815 | ACTGGATTGTTGACC TTTATTTCA GCA TGGAATGAA TTTTTATTTGCTCTA THA_846 864660 - 865499 + | maltose transport system permease protein MalG TERM 1018 866499 - 866487 - g 73 -3.5 -5.28983 | TCTAAAAGATAAAAA TTTAA AGG TTAAA ACGTTGAGTGATATT THA_847 865504 - 866886 + | peptide amidase TERM 1019 867323 - 867364 + T 77 -3.1 -5.66868 | gap 1, opp_overlap 867327, overlap 867326 867327 GAGGCAGATTTTGGA TAAATCCCACCTTACCTTAT TTT GTTAG-TAAGGTGGGAATAA TTTTTTTAATTAATT TERM 1020 867360 - 867327 - T 81 -9 -3.87373 | opp_overlap 867327 867326 867323 CAGATTTTGGATAAA TCCCACCTTACC TTATTTTGTT AGTAAGGTGGGA ATAATTTTTTTAATT THA_848 869418 - 867370 - | lipoprotein, putative THA_849 870623 - 869433 - | hypothetical protein THA_850 872474 - 870675 - | hypothetical protein TERM 1021 871205 - 871244 + g 76 -3.8 -5.41746 | overlap 871206 871207 AGAGTTCAACGTTTA ATTTTTCTACTTTTTTTA CCAT TGAAGAAAGTGGAAAAGC TTTTTTTAGAAGATT TERM 1022 871206 - 871243 + g 71 -7.3 -3.83963 | overlap 871205 871207 GAGTTCAACGTTTAA TTTTTCTACTTTTTTTA CCAT TGAAGAAAGTGGAAAAG CTTTTTTTAGAAGAT TERM 1023 871207 - 871242 + g 72 -8.6 -2.89655 | overlap 871206 871205 AGTTCAACGTTTAAT TTTTCTACTTTTTTTA CCAT TGAAGAAAGTGGAAAA GCTTTTTTTAGAAGA TERM 1024 872085 - 872104 + g 71 -3 -5.20633 | gap 1, overlap 872088 872093 TTTTATTGTTTTTTC GTA-CTTTT TAT AAAAGCTAC TTTTTATATATTTTT THA_851 873718 - 872468 - | hypothetical protein TERM 1025 875410 - 875422 + H 70 -6.3 -4.19369 | TTTCAACCTCTATTT TTCCT TAC AGGAA TTCTCTTTTTTCAAT THA_853 875990 - 876178 + | hypothetical protein THA_854 877676 - 876849 - | hypothetical protein TERM 1026 877052 - 877068 + g 83 -2.4 -5.91981 | overlap 877056 TAAATTCTTCTTCAT TAATTT CCAAA AAATTA TTTTTTTTGAATTTT THA_855 878055 - 877678 - | hypothetical protein THA_856 879142 - 878042 - | crispr-associated ramp protein TERM 1027 878836 - 878867 + g 82 -7.4 -4.82855 | opp_overlap 878843, overlap 878837 878838 TTTCCCAATCATGTT CACCAAATGGAAAA TCAT TTTTCCATTTGGCA TTTTTCAATTTACTA TERM 1028 878837 - 878866 + g 87 -10.9 -3.48629 | opp_overlap 878843, overlap 878836 878838 TTCCCAATCATGTTC ACCAAATGGAAAA TCAT TTTTCCATTTGGC ATTTTTCAATTTACT TERM 1029 878838 - 878865 + g 100 -14.4 -2.68093 | opp_overlap 878843, overlap 878837 878836 TCCCAATCATGTTCA CCAAATGGAAAA TCAT TTTTCCATTTGG CATTTTTCAATTTAC TERM 1030 878860 - 878843 - G 71 -7.1 -3.73953 | opp_overlap 878838 878837 878836 ATCATGTTCACCAAA TGGAAAA TCAT TTTTCCA TTTGGCATTTTTCAA THA_857 882339 - 879157 - | crispr-associated protein, Csx11 family TERM 1031 882092 - 882104 + g 82 -6.3 -5.26875 | opp_overlap 882092 TCAACTTCTAATAAA TTAGG TAG CCTAA TTTTTTGATTAAAAA TERM 1032 882104 - 882092 - G 70 -6.3 -4.183 | opp_overlap 882092 TCAACTTCTAATAAA TTAGG TAG CCTAA TTTTTTGATTAAAAA THA_858 883347 - 882346 - | crispr-associated ramp protein THA_859 884293 - 883325 - | cmr crispr-associated ramp protein, Cmr1 family THA_860 885117 - 884971 - | hypothetical protein THA_861 885494 - 885757 + | hypothetical protein TERM 1033 886321 - 886340 + T 71 -2.2 -5.37593 | opp_overlap 886321, overlap 886323 GGTACAAAAATATAA TTGTTATT TTTA AATAACTA TTTTTTACTTTAAAA THA_862 887140 - 886439 - | nuclease-related domain family TERM 1034 886942 - 886929 - G 91 -5.3 -5.96894 | ATCCAAAGAAAAAAA GAAAC ATCA GTTTC CCCATCATCTCCCTT TERM 1035 887312 - 887349 + r 76 -7.1 -4.26681 | opp_overlap 887314, overlap 887314 CTACTTAAAAATAAA AATTCCCCACCTTTG CATTCAAC CAAAGATGGGGAATC TTTTAAATGATTTAT TERM 1036 887347 - 887314 - R 100 -11.9 -5.63236 | opp_overlap 887312 887314 ACTTAAAAATAAAAA TTCCCCACCTTTG CATTCAAC CAAAGATGGGGAA TCTTTTAAATGATTT TERM 1037 887314 - 887347 + r 82 -9.7 -3.72347 | opp_overlap 887314, overlap 887312 ACTTAAAAATAAAAA TTCCCCACCTTTG CATTCAAC CAAAGATGGGGAA TCTTTTAAATGATTT THA_863 888155 - 887403 - | acetyltransferase TERM 1038 887463 - 887485 + g 85 -5.7 -5.47218 | gap 1, opp_overlap 887461, overlap 887464 887470 TACATCTCTAAATTC T-TTTGCAGG GACA CCTGCAAATA TTTTTTTAGGTGGCA TERM 1039 887464 - 887483 + g 100 -10.8 -4.37763 | opp_overlap 887461, overlap 887463 887470 ACATCTCTAAATTCT TTTGCAGG GACA CCTGCAAA TATTTTTTTAGGTGG TERM 1040 887965 - 887976 + g 73 -5.8 -4.65895 | GTAGCCGAAGCACTT GCCT TAAA AGGC TTTTTACCTAAGACA THA_864 889135 - 888161 - | succinoglycan biosynthesis protein ExoA TERM 1041 888285 - 888257 - G 85 -2.6 -5.87996 | gap 1, opp_overlap 888257 888258 888259 888284, overlap 888259 888269 GAACGAATAAAAAAA TA-CCTTTAAAGA TTTT TCTTTTAAGGCTA TTTTTAAAGAAAAAA TERM 1042 888282 - 888259 - G 78 -6.8 -4.55661 | opp_overlap 888258 888257 888259, overlap 888257 888269 ACGAATAAAAAAATA CCTTTAAAGA TTTT TCTTTTAAGG CTATTTTTAAAGAAA THA_865 890239 - 889148 - | glycosyl transferase, group 1 family protein TERM 1043 889565 - 889546 - G 70 -5 -4.62302 | opp_overlap 889546 GAATATCTTTAAAAA CATCTGAA TCCA TTCCGATG ATTTTAAACTTAAAG TERM 1044 889650 - 889661 + g 83 -3 -5.75478 | opp_overlap 889650 ACTTTTCCAACAAAA GAAA TTTC TTTC TTTTTTTCTCTACTT THA_866 891660 - 890257 - | lipopolysaccharide biosynthesis protein rfbB 892787 - 891717 - | dTDP-glucose 4,6-dehydratase THA_868 893364 - 892792 - | galactoside O-acetyltransferase THA_869 894448 - 893369 - | sugar transaminase, involved in dTDP-4-amino-4,6-dideoxyglucose biosynthesis rfbA 895317 - 894445 - | glucose-1-phosphate thymidylyltransferase THA_871 896393 - 895317 - | hypothetical protein TERM 1045 895473 - 895499 + g 70 -8.2 -3.06696 | opp_overlap 895488, overlap 895477 ACCATCTAATATGTT TTTAGTATCAAA TAC TTTGATACCAAA TCTGTTAAAAAACGC TERM 1046 895841 - 895852 + g 83 -3 -5.74288 | GTGCTGCAGAATTTC CAAT TAAT ATTG TTTTTTCTTCTTTAT TERM 1047 896114 - 896124 + g 78 -4 -5.48063 | ACACTACCCAGTAGG TCTT ATA AAGA TTTTTTCTATTAAAT THA_872 898426 - 896444 - | chain length determinant protein TERM 1048 897639 - 897649 + g 86 -5.4 -5.65513 | ATAAGGTCTTTTACG TCTG ATA CAGA TTTTTTTAGTTCATC THA_873 900986 - 898452 - | polysaccharide export protein, putative TERM 1049 900646 - 900630 - G 84 -6.7 -5.28831 | opp_overlap 900633 ACCAACAAAAGAAAA TAACTTT GTT AAAGTTA TGCCTGGATAAACAG TERM 1050 901117 - 901134 + r 95 -10.5 -4.23723 | opp_overlap 901117 TTTAAAAATAAAAAA GGCCGCG TTTT TGCGGCC TTTTCAGTCATATTC TERM 1051 901134 - 901117 - R 100 -9.8 -5.93252 | opp_overlap 901117 TTTAAAAATAAAAAA GGCCGC GTTTTT GCGGCC TTTTCAGTCATATTC THA_874 901467 - 901138 - | sigma-70 region 2 domain protein TERM 1052 901542 - 901518 - R 100 -14.4 -5.76237 | CATATAAATAAAAAA GAGAGGAGGA GATTA TCCTCCTCTC AAAAAATCAACCAAA THA_875 901740 - 901549 - | hypothetical protein THA_876 901976 - 901764 - | hypothetical protein THA_877 902505 - 901990 - | hypothetical protein THA_878 902888 - 902721 - | hypothetical protein THA_879 904025 - 903054 - | succinoglycan biosynthesis protein ExoA THA_880 905125 - 904034 - | glycosyl transferase, group 1 family protein THA_881 906284 - 905130 - | glycosyl transferase, group 1 family protein THA_882 906765 - 907586 + | integrase, catalytic region THA_883 909214 - 908042 - | UDP-glucose 6-dehydrogenase THA_884 910346 - 909252 - | glycosyl transferase, group 1 family protein THA_885 911564 - 910380 - | hypothetical protein TERM 1053 911318 - 911296 - G 76 -5 -5.1101 | CTAGCAGGTAAAAAA GAAAAAACAA ACT TTACTTTTTC TTGAAAATAATAACC THA_886 912747 - 911620 - | glycosyltransferase, group 1 family TERM 1054 913330 - 913348 + H 74 -3.2 -5.40464 | GCTTTAACTTTTGTA TGATCAAA CAC TTTCATCA TTTTTCTTTCTCATG THA_888 913573 - 913689 + | hypothetical protein THA_889 916300 - 915056 - | bacterial sugar transferase TERM 1055 915305 - 915321 + g 71 -5.8 -4.44277 | AATCATTTCCGGTCT TGGGCC AACAA GGCTCA TTTTGCCTTTTAATA TERM 1056 915341 - 915369 + g 75 -4.6 -5.05301 | opp_overlap 915341 GCCTTTTAATACTAA CAAGAATTGAAG TGACT CATCTATTCTTG TTTTTCTAATTATTT TERM 1057 916521 - 916532 + r 81 -3 -5.75538 | ATTAACATTGTTGTA TATG AGAG CATA TTTTTGTTTTTTCCA THA_890 917103 - 916660 - | ribonuclease H-related protein THA_891 917529 - 917257 - | hypothetical protein TERM 1058 917603 - 917637 + H 80 -10.4 -2.67588 | opp_overlap 917601 917615, overlap 917602 917604 917615 ATTTAGGAAACTATT TTTTATTGTAAATTTA AAC TAAATTTACAATATAA CTCTTTAAATTACGT TERM 1059 917898 - 917888 - H 70 -4 -4.98531 | CCTGGAAATGAAAAA CAAA AAC TTTG AAGGGGGTTAAAACA THA_892 917914 - 918105 + | hypothetical protein THA_893 918134 - 918346 + | hypothetical protein THA_894 918357 - 918548 + | hypothetical protein TERM 1060 918551 - 918584 + F 80 -5.9 -5.12474 | opp_overlap 918551, overlap 918555 TTTGTTTAAGTAAAG TTTTGAGGGGAAGGC ACAC GCCTTCTCCTCTTTA TTTTTGTCTGTTATG TERM 1061 918555 - 918580 + F 100 -15.5 -5.02777 | opp_overlap 918551, overlap 918551 TTTAAGTAAAGTTTT GAGGGGAAGGC ACAC GCCTTCTCCTC TTTATTTTTGTCTGT THA_895 918642 - 918971 + | sigma-70 region 2 domain protein TERM 1062 919391 - 919381 - g 72 -4 -5.17054 | AGAAGATGTAAAAAA CTTT CAA AAAG CACTAACCAATGCCT TERM 1063 919444 - 919432 - g 88 -4.1 -5.77734 | AAACAAAAATAAAAA CGCTA TAG TAACG CTCGGTATAAAACCA manC 918968 - 920074 + | mannose-1-phosphate guanylyltransferase TERM 1064 920080 - 920104 + F 100 -12.9 -5.56568 | overlap 920081 TAAAAAGTAGATTCT GGCGGCTTTGA AGT TCAAAGCCGCA TTTTTTTAGTGGTAT TERM 1065 920081 - 920103 + F 100 -16.4 -3.92314 | overlap 920080 AAAAAGTAGATTCTG GCGGCTTTGA AGT TCAAAGCCGC ATTTTTTTAGTGGTA THA_897 920132 - 921028 + | DHH family TERM 1066 921480 - 921460 - g 100 -9.1 -4.74013 | overlap 921475 921477 GTTAAAGATAGAAAA GAGGCATTT GAA AAATACCTC AAACGAGGAATGCCG THA_898 921034 - 921834 + | PHP domain protein TERM 1067 921907 - 921894 - f 78 -6.7 -4.42235 | opp_overlap 921893, overlap 921882 921881 AATTTTTAAAAAGAA CCCTT TTAA AAGGG AGTGATTTATTTTTG TERM 1068 922366 - 922344 - g 72 -7.8 -3.6471 | TGGTAAATGATATAA TGGGTGATAA ATT TTATCATCCA AACACAACGCCAAGT murE 921920 - 923401 + | UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate ligase TERM 1069 923464 - 923487 + G 85 -3.8 -5.67063 | opp_overlap 923466 923484, overlap 923465 923466 GATTCAATAAATTTA AATGTTTCCC AAAA GGGAAACAAA TTTTTTTGTGATAGC TERM 1070 923465 - 923486 + G 74 -7.3 -3.99153 | opp_overlap 923466 923484, overlap 923464 923466 ATTCAATAAATTTAA ATGTTTCCC AAAA GGGAAACAA ATTTTTTTGTGATAG TERM 1071 923466 - 923485 + G 83 -10.8 -2.98407 | opp_overlap 923466 923484, overlap 923465 923464 TTCAATAAATTTAAA TGTTTCCC AAAA GGGAAACA AATTTTTTTGTGATA TERM 1072 923485 - 923466 - g 95 -10.8 -3.93262 | opp_overlap 923465 923464 923466, overlap 923484 TTCAATAAATTTAAA TGTTTCCC AAAA GGGAAACA AATTTTTTTGTGATA THA_900 923398 - 923748 + | hypothetical protein TERM 1073 923869 - 923854 - g 74 -7.6 -3.83668 | CAATATATAAGAGAA GAAGGT CCTG ACCTTC ATAACTACAAGAGTG TERM 1074 924051 - 924033 - g 95 -7.5 -5.83822 | TATACTTAAAAAAAA TGCTCTA GGCCT TAGAGCA TATCAAAAATCTCTG TERM 1075 924369 - 924381 + G 77 -7.7 -4.16284 | TGATACAGGCTCACT TGCAC TCG GTGCA TTTCTTGCAACATAT mraY 923761 - 924627 + | phospho-N-acetylmuramoyl-pentapeptide- transferase THA_902 924632 - 925477 + | methicillin resistance protein TERM 1076 925543 - 925553 + G 70 -5.4 -4.56629 | AAGGTCTGCCCATTG GTCT TCA AGAC TTTTCTGATATTGTC TERM 1077 926077 - 926091 + G 72 -5 -4.83615 | TAAAAGAAGAAGATT CAAGTC TAC GATTTG TTTTTCTCACCGGTA TERM 1078 927010 - 926982 - g 75 -4.7 -5.06223 | ATAAAGCAAATAAAA GAAAAAAACTACT TTA AAAAGTTTCTTTC AAATTCTGTATATGC THA_903 925524 - 927104 + | conserved protein, with A weak D-galactarate dehydratase/altronate hydrolase domain TERM 1079 927120 - 927130 + G 70 -5.4 -4.56629 | AAGGTCTACCCATTG GTCT TCA AGAC TTTTCTGATATTGTG THA_904 927101 - 928657 + | conserved protein, with A weak D-galactarate dehydratase/altronate hydrolase domain TERM 1080 928673 - 928683 + G 70 -5.4 -4.56629 | AAGGTCTACCCATTG GTCT TCA AGAC TTTTCTGATATTGTC TERM 1081 929207 - 929221 + G 72 -5 -4.83615 | TAAAAGAAGAAGATT CAAGTC TAC GATTTG TTTTTCTCACCGGTA TERM 1082 929788 - 929773 - g 70 -6.2 -4.10007 | ACAAGCTTTGCAAAA TTGCTT GCTG AAGCAA GGTATGGAATAAACC THA_905 928654 - 930237 + | conserved protein, with A weak D-galactarate dehydratase/altronate hydrolase domain TERM 1083 930253 - 930263 + G 70 -5.4 -4.56629 | AAGGTCTACCCATTG GTCT TCA AGAC TTTTCTGATATTGTG TERM 1084 931714 - 931686 - g 75 -4.7 -5.06223 | ATAAAGCAAATAAAA GAAAAAAACTACT TTA AAAAGTTTCTTTC AAATTCTGTATATGC THA_906 930234 - 931796 + | hypothetical protein TERM 1085 931855 - 931886 + T 100 -8.8 -5.88197 | opp_overlap 931859, overlap 931858 931859 ATTTTTTCTAAAAAA AAAATGGACATACC GTCT GGTATGTCCAATTA TTTTTTTGTATTTGG TERM 1086 931858 - 931883 + T 100 -10.5 -4.94703 | opp_overlap 931859, overlap 931855 931859 TTTTCTAAAAAAAAA ATGGACATACC GTCT GGTATGTCCAA TTATTTTTTTGTATT TERM 1087 931882 - 931859 - T 100 -14 -6.34424 | opp_overlap 931859 931858 931855 TTTCTAAAAAAAAAA TGGACATACC GTCT GGTATGTCCA ATTATTTTTTTGTAT TERM 1088 931859 - 931882 + T 100 -14 -3.53161 | opp_overlap 931859, overlap 931858 931855 TTTCTAAAAAAAAAA TGGACATACC GTCT GGTATGTCCA ATTATTTTTTTGTAT THA_907 932180 - 931884 - | hypothetical protein flgI 933188 - 932199 - | flagellar P-ring protein FlgI flgH 933787 - 933200 - | flagellar L-ring protein FlgH flgA 934716 - 933784 - | flagella basal body P-ring formation protein FlgA gyrB 936600 - 934717 - | DNA gyrase, B subunit THA_912 936895 - 936590 - | hypothetical protein THA_913 937619 - 936879 - | branched-chain amino acid aminotransferase 1 THA_914 938883 - 937594 - | Fe-S oxidoreductase THA_915 939332 - 938889 - | CBS domain containing membrane protein THA_916 940287 - 939334 - | sugar kinase, PfkB family THA_917 941011 - 940292 - | ABC transporter, ATP-binding protein, putative TERM 1089 940397 - 940382 - GR 74 -7.6 -3.73872 | AGCAAGAGGCAAGAA GCGTTT AAAA AAACGC GTTGCAATTATTAGT THA_918 941126 - 940983 - | hypothetical protein TERM 1090 941367 - 941340 - R 100 -11.4 -4.83246 | opp_overlap 941336 941343 TGATAAATAAATAAA TAATACCGCCCC TTAA AGAGCGGTATTA TTAAAATTTTGAATA THA_919 941995 - 941387 - | lipoprotein, putative THA_920 944753 - 942009 - | hypothetical protein TERM 1091 942315 - 942336 + g 81 -4.5 -5.35354 | opp_overlap 942300 942315, overlap 942300 TTTATTCTTCGAATA TAATCCTTT TTCA ACAGGATTA TTTTTTAATTGTGTG THA_921 946339 - 944774 - | lipoprotein, putative THA_922 946521 - 946408 - | hypothetical protein TERM 1092 946477 - 946496 + gH 80 -5.8 -4.95876 | opp_overlap 946477 AGAAGGGGGAAAATA GGATGAAA AAAT TTTTATCC TTTTTAATTCTGCTT TERM 1093 947036 - 947009 - gR 70 -5 -4.67011 | opp_overlap 947004 947009 947011, overlap 947011 947012 947014 AAGCTCAGGTAAAAA TACTATTTCACT TGTA AGTGAAATACCA TTTTCTATCTATAAC TERM 1094 947033 - 947012 - gR 73 -8.9 -2.96405 | opp_overlap 947011 947009 947004, overlap 947011 947009 947014 CTCAGGTAAAAATAC TATTTCACT TGTA AGTGAAATA CCATTTTCTATCTAT THA_923 946479 - 947738 + | hypothetical protein TERM 1095 947778 - 947752 - TR 100 -15.3 -5.31059 | opp_overlap 947752 AGAGCAATTAAAAAA CCCGTTTCTAG TTTTG CTAGAAACGGG TTTTTTTATTTAATT TERM 1096 947752 - 947778 + Tr 100 -16 -6.01187 | opp_overlap 947752 AGAGCAATTAAAAAA CCCGTTTCTAGT TTT GCTAGAAACGGG TTTTTTTATTTAATT THA_924 948520 - 947795 - | isoamylase N- domain protein THA_925 948939 - 948613 - | MnhC THA_926 950195 - 948933 - | NADH dehydrogenase subunit n TERM 1097 950081 - 950052 - G 79 -7.2 -4.41779 | overlap 950071 AATAAAATAAAAAGA GGAAGAATCCAT AACAAG ACGGACTCCTCC ATATCCATTTAAAAC THA_927 951412 - 950225 - | 6-phosphofructokinase TERM 1098 951590 - 951609 + r 75 -5 -5.03747 | overlap 951594 GCCCTACTGGTATTG TTAAGCCA TATT TGGCTAAA TTTTTTGCGGCATTT TERM 1099 952827 - 952841 + r 72 -7.2 -3.90112 | opp_overlap 952827 952826 952829 TATATTATCATCAAT TACAGA ACG TCTGTA TTTCGTTACAAGAAC TERM 1100 952976 - 952997 + r 95 -11.7 -3.68988 | opp_overlap 952975 952966, overlap 952974 952988 AATATGCAAATTCAT CTCCATCTT ATAG AAGATGGAG TCTTCTTTGCTTTTA TERM 1101 953018 - 953057 + r 70 -7.2 -3.61777 | opp_overlap 953027, overlap 953015 953027 TTTGCTTTTATTTCG ATAAATAAAGGTTCCAGC GCTT GCTGGAACCTTAATATGC TATTTCTAATATCTT TERM 1102 953027 - 953048 + r 100 -14.5 -3.33798 | opp_overlap 953027, overlap 953018 953015 ATTTCGATAAATAAA GGTTCCAGC GCTT GCTGGAACC TTAATATGCTATTTC TERM 1103 953048 - 953027 - R 100 -14.5 -4.55697 | opp_overlap 953018 953015 953027 ATTTCGATAAATAAA GGTTCCAGC GCTT GCTGGAACC TTAATATGCTATTTC THA_928 954200 - 953049 - | NADH-dependent butanol dehydrogenase a THA_929 954660 - 954205 - | hypothetical protein THA_930 955562 - 954663 - | era GTP-binding protein Era pheT 957912 - 955564 - | phenylalanyl-tRNA synthetase, beta subunit THA_932 958561 - 957932 - | hypothetical protein THA_933 958985 - 958566 - | TPR Domain containing protein TERM 1104 958796 - 958811 + gr 70 -6.2 -4.12254 | ATTCTGCAAAATCGG GCTTTA TCTG TAAAGC TTGTTTGTAGTACTC THA_934 960456 - 958957 - | hypothetical protein TERM 1105 959628 - 959646 + gr 73 -9 -2.90199 | overlap 959625 TATCCTTTAGTTCAA GTGTATAA AGA TTATACAC TAATATTTGATTCGA THA_935 961058 - 960453 - | hypothetical protein TERM 1106 960750 - 960738 - G 70 -6.3 -4.17513 | opp_overlap 960737 960742 AAGAAAAACACCAAA TGTTG TGG CAACA CCTTTACCACCTTTA TERM 1107 961009 - 960974 - G 72 -8.5 -3.25823 | gap 1, opp_overlap 960974, overlap 961006 CTTTCCTTATATCAA TTCCTTTAAGCTTTCC AATTA GGAA-GCTAAAAGGAA TTGCTCCCAAAAAGT TERM 1108 960974 - 961009 + g 78 -9.9 -3.14211 | opp_overlap 960974 961006 CTTTCCTTATATCAA TTCCTTTAAGCTTTC CAATTA GGAAGCTAAAAGGAA TTGCTCCCAAAAAGT THA_936 961857 - 961060 - | hypothetical protein TERM 1109 961315 - 961347 + g 70 -3.7 -5.14965 | gap 1, opp_overlap 961320, overlap 961316 961317 TTTTTTTACATCGTA TA-CAACAAAGTAT AATTGC ATACTTTGTTGCTG TTTTTTACTAACACT TERM 1110 961316 - 961345 + g 74 -6.6 -4.20707 | opp_overlap 961320, overlap 961315 961317 TTTTTTACATCGTAT ACAACAAAGTAT AATTGC ATACTTTGTTGC TGTTTTTTACTAACA TERM 1111 961317 - 961344 + g 78 -10.1 -3.11701 | opp_overlap 961320, overlap 961316 961315 TTTTTACATCGTATA CAACAAAGTAT AATTGC ATACTTTGTTG CTGTTTTTTACTAAC THA_937 962945 - 961881 - | UDP-N-acetylglucosamine 2-epimerase THA_938 964041 - 962956 - | transporter, major facilitator family TERM 1112 963951 - 963941 - G 76 -5.4 -5.10601 | ATAAAAGTAGAAAAA GCAA CTG TTGC ATTCAATTTTTCCTG THA_939 964207 - 965454 + | ABC transporter TERM 1113 965461 - 965477 + F 100 -13.7 -4.19746 | opp_overlap 965461 ACAGATTAAAACAAA CGGGGCA TCT TGCCCCG TTATTTTGAGGTGAG TERM 1114 965477 - 965461 - f 100 -13.7 -4.76191 | opp_overlap 965461 ACAGATTAAAACAAA CGGGGCA TCT TGCCCCG TTATTTTGAGGTGAG THA_940 965496 - 966416 + | ABC transporter TERM 1115 967103 - 967087 - g 84 -9.4 -3.73775 | opp_overlap 967087 CGTAGCTTTAGTAAA CCTGGC AGGAA GCCAGG TTGTAGAATGGAATG TERM 1116 967087 - 967103 + G 78 -9.4 -3.33162 | opp_overlap 967087 CGTAGCTTTAGTAAA CCTGGC AGGAA GCCAGG TTGTAGAATGGAATG THA_941 966413 - 967225 + | ABC transporter, carbohydrate uptake transporter-1 (CUT1) family, permease protein THA_942 968304 - 967222 - | oxidoreductase, 2-nitropropane dioxygenase family TERM 1117 967361 - 967346 - G 70 -4 -5.00616 | gap 1, opp_overlap 967355 CCTTCTTTTAAAAAA CCAA-GC TTT GCATTGG TAAGTGCTTTTGCAA THA_943 968443 - 968604 + | hypothetical protein TERM 1118 968639 - 968659 + F 82 -9.9 -3.21593 | overlap 968637 TTATATTACTTTAGA TTTTCTAAG CTC CTTAGAAAA TGTTGTAAACGGATA THA_944 969519 - 970022 + | diguanylate cyclase TERM 1119 970051 - 970025 - T 85 -8 -4.47259 | opp_overlap 970027 970028, overlap 970028 AGTAGAATATTAAAA TAAGAACCTCCA AAC TGGAGGTTCATT TTTCAATATAGCTTA TERM 1120 970027 - 970049 + T 95 -10.6 -4.71061 | opp_overlap 970025 970028, overlap 970028 TAGAATATTAAAATA AGAACCTCCA AAC TGGAGGTTCA TTTTTCAATATAGCT TERM 1121 970048 - 970028 - T 100 -14.1 -4.33487 | opp_overlap 970028 970027, overlap 970025 AGAATATTAAAATAA GAACCTCCA AAC TGGAGGTTC ATTTTTCAATATAGC TERM 1122 970028 - 970048 + T 100 -14.1 -3.41913 | opp_overlap 970025 970028, overlap 970027 AGAATATTAAAATAA GAACCTCCA AAC TGGAGGTTC ATTTTTCAATATAGC gidA2 971921 - 970047 - | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA TERM 1123 971300 - 971311 + g 70 -5.8 -4.28254 | TTTTTAAAACTCTTG CTGG AGTG CCAG TTTTGAATCTTGAAA TERM 1124 971368 - 971393 + g 76 -9.1 -3.12874 | TTACTCAAACCTTTT GCAGGAAGA TCTCCCAT TCTTCCTGC TTCCATAGTATCTCT THA_946 974765 - 971982 - | exonuclease sbcc, putative TERM 1125 973166 - 973177 + g 71 -3 -5.18409 | GTTTTAAATTTATAT TAGA AAGT TCTA TTTCTTTTTCTTTTA THA_947 975912 - 974755 - | exonuclease sbcd TERM 1126 975569 - 975591 + g 93 -5.6 -5.76949 | opp_overlap 975569 TCACCATCTAAATAA GACTTTGGAA ATA TTGCAAGGTC TTTTTTTTCAAGATA THA_948 976571 - 975933 - | hypothetical protein TERM 1127 975968 - 975997 + g 83 -10.9 -2.98986 | opp_overlap 975959 975977, overlap 975970 975970 975975 ATATTATCTGAATTC TATCAGAGACATC CTCA GATGTATCTGATA TGTCTGCTATCCTAT TERM 1128 975970 - 975995 + g 75 -9.1 -3.04537 | opp_overlap 975959 975977, overlap 975970 975968 975975 ATTATCTGAATTCTA TCAGAGACATC CTCA GATGTATCTGA TATGTCTGCTATCCT THA_949 979517 - 976587 - | alpha-amylase TERM 1129 978971 - 978937 - G 82 -8.6 -3.95584 | opp_overlap 978940 978943 TCTTTATTAATTAAA GTGGAAGTACCCGTAA TTG TTACAGGTACCTCTTC ATAATCTTCTTGTGC TERM 1130 978940 - 978968 + g 74 -8.9 -3.30452 | opp_overlap 978937, overlap 978943 TTATTAATTAAAGTG GAAGTACCCGTAA TTG TTACAGGTACCTC TTCATAATCTTCTTG TERM 1131 978943 - 978965 + g 73 -9.2 -2.51702 | opp_overlap 978937, overlap 978940 TTAATTAAAGTGGAA GTACCCGTAA TTG TTACAGGTAC CTCTTCATAATCTTC THA_950 980478 - 979561 - | sodium/phosphate symporter THA_951 981464 - 980544 - | sodium/phosphate symporter TERM 1132 980966 - 980950 - G 79 -9.5 -3.53012 | TTGTTTGCGCCTAAA GCATATG AAC CATATGC ACCAACTAGCAACGT TERM 1133 981548 - 981571 + r 100 -15.4 -3.04799 | opp_overlap 981548, overlap 981550 ATTTAGATAAAAAAA TATCGGGGAG AAAT CTCCCCGATA TCTTCAACACTTATA TERM 1134 981571 - 981548 - R 100 -15.4 -5.72616 | opp_overlap 981548 981550 ATTTAGATAAAAAAA TATCGGGGAG AAAT CTCCCCGATA TCTTCAACACTTATA TERM 1135 981550 - 981569 + r 100 -13.6 -3.0782 | opp_overlap 981548, overlap 981548 TTAGATAAAAAAATA TCGGGGAG AAAT CTCCCCGA TATCTTCAACACTTA iorB 982204 - 981590 - | indolepyruvate ferredoxin oxidoreductase, beta subunit iorA 984132 - 982204 - | indolepyruvate ferredoxin oxidoreductase, alpha subunit TERM 1136 984945 - 984963 + G 72 -5.4 -4.72986 | TATAAATAACATGTG GTTTATTA CAA TAATAAGC TTTTTAATAACCGTA THA_954 984412 - 985686 + | citrate transporter TERM 1137 985780 - 985740 - g 82 -4.2 -5.51402 | gap 1, opp_overlap 985740, overlap 985741 985750 ACAGATCCAAAAAAA CCAGGAT-ATATTCCAAAA GAGA TTTTGGAAAATGAACCTGA TCCATTATGTCAAAG THA_955 985689 - 986765 + | GTP-binding protein THA_956 986769 - 987359 + | propanediol utilization protein TERM 1138 987418 - 987368 - f 82 -2.6 -5.97979 | opp_overlap 987372 987381, overlap 987369 987371 987372 987381 AGAATAATAAAAAAA TGATCTAGAAAAATCCCCTTCT TTTTCTT AGGAGGGGATTTTTCTTGTTTT TAATTTGTCATGATA TERM 1139 987415 - 987371 - f 77 -8.7 -3.62312 | opp_overlap 987372 987381, overlap 987369 987368 987372 987381 ATAATAAAAAAATGA TCTAGAAAAATCCCCTTCT TTTTCTT AGGAGGGGATTTTTCTTGT TTTTAATTTGTCATG TERM 1140 987414 - 987372 - f 89 -12.2 -2.74947 | opp_overlap 987372 987381, overlap 987371 987369 987368 987381 TAATAAAAAAATGAT CTAGAAAAATCCCCTTCT TTTTCTT AGGAGGGGATTTTTCTTG TTTTTAATTTGTCAT TERM 1141 987372 - 987414 + F 100 -14.4 -5.05505 | opp_overlap 987371 987369 987368 987372 987381, overlap 987381 TAATAAAAAAATGAT CTAGAAAAATCCCCTTCT TTTTCTT AGGAGGGGATTTTTCTTG TTTTTAATTTGTCAT TERM 1142 987381 - 987405 + F 100 -7.9 -5.51353 | opp_overlap 987372 987371 987369 987368 987381, overlap 987372 AATGATCTAGAAAAA TCCCCTTCT TTTTCTT AGGAGGGGA TTTTTCTTGTTTTTA TERM 1143 987405 - 987381 - f 78 -5.7 -4.89339 | opp_overlap 987381 987372, overlap 987372 987371 987369 987368 AATGATCTAGAAAAA TCCCCTTCT TTTTCTT AGGAGGGGA TTTTTCTTGTTTTTA THA_957 987412 - 988302 + | purine nucleoside phosphorylase I, inosine and guanosine-specific TERM 1144 988954 - 988938 - g 73 -3.7 -5.26316 | overlap 988939 TCATTCTACAAAAAA CCTCCAT ATA ATGAAGA ACTTTCAAAGGTATT THA_958 988320 - 990617 + | methyl-accepting chemotaxis protein (MCP) signaling domain protein TERM 1145 990646 - 990634 - g 77 -7.7 -4.05677 | AAATAATGGAAATAA TCGAC TTT GTCGA AACACAATTTTTGAA TERM 1146 990707 - 990748 + G 88 -7.9 -5.00467 | opp_overlap 990708, overlap 990708 AATGTTCTTAATTAC ACCCTTACTGTCAGCGGCA TTCG TGCCCACGACAGTGAGGGC TTTTCTTGTTCTTGC TERM 1147 990708 - 990747 + G 93 -11.4 -3.58654 | opp_overlap 990708, overlap 990707 ATGTTCTTAATTACA CCCTTACTGTCAGCGGCA TTCG TGCCCACGACAGTGAGGG CTTTTCTTGTTCTTG TERM 1148 990747 - 990708 - g 87 -11.4 -2.90194 | opp_overlap 990708 990707 ATGTTCTTAATTACA CCCTTACTGTCAGCGGCA TTCG TGCCCACGACAGTGAGGG CTTTTCTTGTTCTTG fliR 990624 - 991388 + | flagellar biosynthetic protein FliR TERM 1149 991514 - 991530 + F 73 -4.3 -5.02074 | TTTACTTTTCTTGCG GCAGTGC TTG GCTTTGC TTTTTTAGGCCGTGG flhB 991517 - 992455 + | flagellar biosynthetic protein FlhB THA_961 992929 - 992438 - | lipoprotein, putative TERM 1150 992849 - 992823 - G 100 -11.8 -3.87112 | CAATTAATAACAGAA TTTAGCATCATA CAA CATGATGCTAAA ACTATAACTGCTATT nusB 993347 - 992919 - | transcription antitermination factor NusB TERM 1151 993316 - 993302 - G 70 -5 -4.66163 | opp_overlap 993302 AGTCCCATTGAAAAA GTGCTT TAA AAACAC TTTCGCGCATTTTAT THA_963 993683 - 993348 - | hypothetical protein THA_964 994257 - 993700 - | efp translation elongation factor P THA_965 995642 - 994269 - | regulatory protein, putative TERM 1152 995543 - 995558 + g 82 -6.2 -5.24416 | TTTCTATTTCTTCTT CTATTG CATT CAATAG TTTTTCTTCTGATTC THA_966 996003 - 995635 - | response regulator THA_967 996606 - 996004 - | hypothetical protein THA_968 997346 - 996603 - | hypothetical protein THA_969 998044 - 997349 - | ABC transporter, ATP-binding protein TERM 1153 997954 - 997917 - G 100 -17.1 -4.57787 | ATAATATTAAATAAA GTAGTCTTGCCGGAACC ATTT GGTCCCAGCAAGCCTAC CACTTCACCTGTTCT THA_970 998541 - 998053 - | cationic outer membrane protein TERM 1154 998272 - 998284 + g 72 -6.3 -4.20783 | TTTTTGAGTGTACTC TGCAA TTT TTGCA TTTATTAAATCAGCT THA_971 1000104 - 998554 - | ATP-dependent RNA helicase TERM 1155 1000053 - 1000070 + g 79 -5.6 -5.09225 | TTTCAAATCCTTTCT CGTTGA TTGCCC TCAACG TTTTTTCACTCAAGT THA_972 1000598 - 1000101 - | def peptide deformylase surE 1001343 - 1000576 - | 5'/3'-nucleotidase SurE THA_974 1001828 - 1001364 - | hypothetical protein TERM 1156 1001607 - 1001650 + g 81 -10.3 -3.0623 | opp_overlap 1001608, overlap 1001604 GTATTTTCTTAAAGA ATCTGGAGTTGGAGAACGA ACAAAA TCGTTCCCCGCCTCCAGAA TATCATTTACTATTC TERM 1157 1001649 - 1001608 - G 100 -13.8 -3.9122 | opp_overlap 1001607 1001604 TATTTTCTTAAAGAA TCTGGAGTTGGAGAACGA ACAAAA TCGTTCCCCGCCTCCAGA ATATCATTTACTATT THA_975 1002641 - 1001829 - | mrp Mrp protein TERM 1158 1002405 - 1002420 + g 74 -3.2 -5.40072 | overlap 1002406 AGGAACTATCTCTTC ACCATC AACC GATGGA TTTTTTTCACCAAGC TERM 1159 1003003 - 1002989 - g 82 -5 -5.43414 | overlap 1002993 ATTATAGATAAAAAA GCATTC TTT GAATAC AAAAAGTTAGTTTTA THA_976 1002782 - 1003213 + | hypothetical protein THA_977 1003221 - 1004963 + | ATPase component of ABC transporters with duplicated ATPase domains THA_978 1006295 - 1004958 - | Na+ driven multidrug efflux pump TERM 1160 1006109 - 1006098 - G 71 -2.2 -5.4477 | overlap 1006069 1006067 AAATTGTGAAAAAAA GATG GATC CACC AGATATAAGTCCGAA THA_979 1006410 - 1006673 + | transcriptional regulator, ArsR family TERM 1161 1007551 - 1007536 - g 70 -6.2 -4.14945 | opp_overlap 1007536 GGAATAATAACCAAA CTTCTT CCTC AAGAAG TGGTTACAAAAATAC THA_980 1006753 - 1007841 + | transporter THA_981 1007854 - 1008090 + | redox-active disulfide protein 2 TERM 1162 1008107 - 1008130 + F 100 -12.6 -5.26875 | opp_overlap 1008107 GATAATTAGAAAAAA TAAGAGGGTA AATT TACCCTCTTA TTTTTTACTTGACAA TERM 1163 1008130 - 1008107 - f 100 -12.6 -5.39755 | opp_overlap 1008107 GATAATTAGAAAAAA TAAGAGGGTA AATT TACCCTCTTA TTTTTTACTTGACAA TERM 1164 1008775 - 1008762 - g 70 -5.3 -4.52589 | opp_overlap 1008768, overlap 1008769 1008770 CTCTTTGATATAAAA GATAG AATT CTATC AAGATACCTTGATAG TERM 1165 1008792 - 1008769 - g 71 -6.8 -3.87562 | opp_overlap 1008768, overlap 1008762 1008770 ATATAAAAGATAGAA TTCTATCAAG ATAC CTTGATAGAG AATTTACAGATATTT TERM 1166 1008791 - 1008770 - g 79 -10.3 -2.9091 | opp_overlap 1008768, overlap 1008762 1008769 TATAAAAGATAGAAT TCTATCAAG ATAC CTTGATAGA GAATTTACAGATATT THA_982 1008222 - 1009556 + | NADH oxidase TERM 1167 1009574 - 1009605 + T 100 -15.2 -3.9444 | opp_overlap 1009565 1009564, overlap 1009576 AAAAATTTATTTTCT AAGCTCCCCTGCCT TTTT AGGTAGGGGAGCTC TTTAATTAAGCTTTC TERM 1168 1009576 - 1009603 + T 100 -17.8 -3.55262 | opp_overlap 1009565 1009564, overlap 1009574 AAATTTATTTTCTAA GCTCCCCTGCCT TTTT AGGTAGGGGAGC TCTTTAATTAAGCTT THA_983 1010459 - 1009611 - | permease of the drug/metabolite transporter, putative THA_984 1010947 - 1010486 - | methyltransferase domain family THA_985 1011945 - 1011124 - | integrase, catalytic region THA_986 1012525 - 1012776 + | hypothetical protein TERM 1169 1012751 - 1012765 + F 70 -4.3 -4.91473 | ATAGCGGTAGTTTTT TTGGA TCTTT TCCAA TTTCTTTTTAGATTG TERM 1170 1012860 - 1012846 - f 82 -8.5 -4.06502 | opp_overlap 1012846 TACTTTGAAATTAAA CCGGG TTGAT CCCGG TTTTTATTATTTAAT TERM 1171 1012846 - 1012860 + F 100 -8.5 -5.39905 | opp_overlap 1012846 TACTTTGAAATTAAA CCGGG TTGAT CCCGG TTTTTATTATTTAAT TERM 1172 1014137 - 1014125 - g 73 -3.5 -5.28755 | AAACATATGAAAAAA TATAT GAA ATATA TGAACTAGTAGAAGA THA_987 1012978 - 1014513 + | conserved protein, with A weak D-galactarate dehydratase/altronate hydrolase domain THA_988 1015673 - 1014648 - | integrase, catalytic region THA_989 1016161 - 1016274 + | methyl-accepting chemotaxis protein TERM 1173 1016657 - 1016644 - g 72 -6.7 -4.19577 | overlap 1016627 1016625 GAAGCTGTAAAACAA CTTGC ATAT GCAAG CCAAGACATAAGTGT THA_990 1016578 - 1016739 + | hypothetical protein TERM 1174 1016822 - 1016781 - T 100 -12.5 -3.81339 | opp_overlap 1016782 1016786, overlap 1016782 1016786 TAGTTATAATCCAAA GTAAATCTCCCCATCCT AATAATCA AGGACGGGGAGATTTAT TTGTTATAATCAACT TERM 1175 1016782 - 1016821 + T 100 -13.8 -4.35483 | opp_overlap 1016782 1016781 1016786, overlap 1016786 AGTTATAATCCAAAG TAAATCTCCCCATCCT AATAATCA AGGACGGGGAGATTTA TTTGTTATAATCAAC TERM 1176 1016821 - 1016782 - T 100 -16 -2.88321 | opp_overlap 1016782 1016786, overlap 1016781 1016786 AGTTATAATCCAAAG TAAATCTCCCCATCCT AATAATCA AGGACGGGGAGATTTA TTTGTTATAATCAAC TERM 1177 1016817 - 1016786 - T 100 -12.4 -4.11275 | opp_overlap 1016786 1016782, overlap 1016782 1016781 ATAATCCAAAGTAAA TCTCCCCATCCT AATAATCA AGGACGGGGAGA TTTATTTGTTATAAT TERM 1178 1016786 - 1016817 + T 100 -10.2 -4.7458 | opp_overlap 1016782 1016781 1016786, overlap 1016782 ATAATCCAAAGTAAA TCTCCCCATCCT AATAATCA AGGACGGGGAGA TTTATTTGTTATAAT THA_991 1017511 - 1016921 - | tsf translation elongation factor Ts TERM 1179 1017104 - 1017119 + g 74 -7.6 -3.84039 | opp_overlap 1017103, overlap 1017103 TTTTTCAATAACATG TTCTGG TTTT CCAGAA TCTTTTAATTGGTCT THA_992 1018252 - 1017536 - | histidinol phosphatase pyrG 1019825 - 1018245 - | CTP synthase TERM 1180 1018726 - 1018736 + g 91 -5.4 -5.80951 | opp_overlap 1018720 ATTCCAAGACAAATT CCAA GAA TTGG TTTTTTATTTTCCCT THA_994 1019919 - 1021160 + | competence/damage-inducible protein CinA N- domain, putative THA_995 1021157 - 1022140 + | transcriptional regulator, LacI family TERM 1181 1022659 - 1022686 + G 70 -4.2 -4.91712 | CTGGCAAAAATTCTT TGGTTTTGTTAT TTTA AAAACAATACCA TTTTTCTGGATTCCG THA_996 1022162 - 1022803 + | hypothetical protein THA_997 1022807 - 1023253 + | hypothetical protein TERM 1182 1023317 - 1023337 + F 100 -11.3 -4.4078 | opp_overlap 1023312 ACACTATATATAGTT TTTCTTACC AGC GGTAAGAAA TTTTACTTACAAAAA TERM 1183 1024844 - 1024834 - g 82 -4 -5.52023 | ACTATGAAGAAAAAA TATC CTG GATA AGATTACTAAAACTT THA_998 1023624 - 1025522 + | ATP-dependent DNA helicase THA_999 1025519 - 1026268 + | hypothetical protein TERM 1184 1026582 - 1026569 - g 85 -3.9 -5.71295 | overlap 1026577 1026578 1026579 ATACAAAAAGAAAAA TGAAA AAAC TTTCA GTGTTGAAAATAACA TERM 1185 1026592 - 1026577 - g 76 -2.6 -5.56112 | overlap 1026569 1026578 1026579 AGAAAAATGAAAAAA CTTTCA GTGT TGAAAA TAACAACAGTGAAGA THA_1000 1026252 - 1026869 + | RNA polymerase sigma-E factor THA_1001 1026866 - 1027171 + | hypothetical protein TERM 1186 1027534 - 1027520 - g 81 -5.8 -5.27923 | CAATTTCAGAAAAAA CTTTTA ATA TAAAAG CTGAAAAAAGAAATG THA_1002 1027183 - 1027902 + | hypothetical protein TERM 1187 1027955 - 1027978 + G 80 -8.8 -3.81256 | opp_overlap 1027957, overlap 1027951 1027956 CCATATCTGAGTACA TATGCCCGCT ATAT AGCGGGCACG TTAATTTTTAAAGAT TERM 1188 1027956 - 1027977 + G 76 -10.1 -2.88031 | opp_overlap 1027957, overlap 1027955 1027951 CATATCTGAGTACAT ATGCCCGCT ATAT AGCGGGCAC GTTAATTTTTAAAGA TERM 1189 1027976 - 1027957 - g 100 -13.6 -2.94925 | opp_overlap 1027956 1027955 1027951 ATATCTGAGTACATA TGCCCGCT ATAT AGCGGGCA CGTTAATTTTTAAAG THA_1003 1027880 - 1029436 + | Fe-S oxidoreductase TERM 1190 1030221 - 1030211 - g 78 -4 -5.45652 | AGTTTTAACAAAAAA CATT GAA AATG TGGAAACTATAAAAT THA_1004 1029504 - 1030403 + | ggdef family protein TERM 1191 1030825 - 1030807 - f 82 -7.6 -4.4296 | opp_overlap 1030797 1030809, overlap 1030797 GAAGAGATATCAAAA TATCATTT CAT AAATGATA ATGTGGATTATGATG THA_1006 1031660 - 1032130 + | phosphodiesterase, family THA_1007 1032133 - 1033500 + | 4-alpha-glucanotransferase TERM 1192 1033682 - 1033712 + G 71 -5.5 -4.40003 | opp_overlap 1033682 AAAGTGAAAGATAAC GGAGAAGGTAT GGGACGTGA AGACCTTCTCC TTTCTATTTATGAAC TERM 1193 1034225 - 1034252 + G 78 -9.4 -3.36327 | opp_overlap 1034225 1034220 1034229, overlap 1034229 AAAAATAGGACAGGA CAGATCTTTTTT GTAC AAAAAAGATTTG TTATGGATAAAATGC TERM 1194 1034229 - 1034248 + G 74 -6.6 -4.33417 | opp_overlap 1034229 1034225 1034220, overlap 1034225 ATAGGACAGGACAGA TCTTTTTT GTAC AAAAAAGA TTTGTTATGGATAAA TERM 1195 1034421 - 1034401 - g 72 -7.7 -3.67068 | overlap 1034393 AGTAAAATTTTCAAA TCCGAATAT TAT ATATTCAGA TATAACAAGAACGGT TERM 1196 1034471 - 1034456 - g 85 -4.8 -5.53991 | opp_overlap 1034454 1034456 GAGGCATTAAAAAAA TTTGTT TCAA AACAAA TATTTGTTAAGCCTA TERM 1197 1035029 - 1035019 - g 78 -4 -5.4756 | AATGGGAACAAAAAA TATG AAG CATA TAATAGCTGATAAAG THA_1008 1033502 - 1035208 + | DNA mismatch repair protein MutL TERM 1198 1035206 - 1035237 + T 100 -14.6 -4.62054 | opp_overlap 1035212 TATTTTGATAGAACG TAAAAATGGCTCGG TATT CCGAGCCATTTATA TTTTAATTTCATTGA TERM 1199 1035231 - 1035212 - T 100 -13.6 -4.79756 | opp_overlap 1035206 GATAGAACGTAAAAA TGGCTCGG TATT CCGAGCCA TTTATATTTTAATTT THA_1009 1036072 - 1035233 - | metyl-accepting chemotaxis protein THA_1010 1036909 - 1036088 - | integrase, catalytic region THA_1011 1038275 - 1037250 - | membrane associated methyl-accepting chemotaxis protein, putative THA_1012 1038719 - 1038856 + | hypothetical protein TERM 1200 1038855 - 1038843 - f 82 -6.3 -5.09521 | opp_overlap 1038843 1038842, overlap 1038848 GTAAGAAATTAAAAA TAGCA CAC TGCTA GTTATTGACAGCAGT THA_1013 1038925 - 1039317 + | hypothetical protein TERM 1201 1039377 - 1039401 + T 100 -17.3 -4.71776 | ATATTTTTTCTTATT TTAACCCCTCC TTT GGAGGGGTTAA TTTTATTCAATATTA THA_1014 1040771 - 1039509 - | hypothetical protein TERM 1202 1040829 - 1040806 - R 100 -11.7 -6.15828 | opp_overlap 1040805 1040804 TTTAGTAAAAAAAAA GCCGGGCAC ATTAAA ATGCCCGGC AATTGTCCTTTTTTG TERM 1203 1040894 - 1040864 - R 100 -13.4 -3.99592 | opp_overlap 1040868, overlap 1040854 ATTTACCACGACAAA GGTGGCGGACAA TTGCCGC TTGTCCACCACC ATGCAAAAATATTGT THA_1015 1040982 - 1040851 - | hypothetical protein TERM 1204 1041067 - 1041042 - R 100 -11.3 -5.26918 | gap 1, opp_overlap 1041040 ATATTTGATAAAAAA TTCCCCCTC-TA CAT TAGGAGGGGGAA AATTAAGTTATATTT THA_1016 1043072 - 1041075 - | methyl-accepting chemotaxis protein 4 TERM 1205 1043138 - 1043156 + r 77 -4 -5.40072 | overlap 1043139 AAACTATTTTATCAG TTTTTAAA TTA TTTAAAAG TTTTTTTCACAAGAA TERM 1206 1043250 - 1043288 + r 81 -9 -3.84825 | opp_overlap 1043255, overlap 1043255 TTGAAAGTTTTGAAT TGAAACTAATCCCCTC TCTCCTT GAGGGGACTAGTTTTG TTTAATATAAATGGC TERM 1207 1043255 - 1043283 + r 95 -8.9 -4.97158 | opp_overlap 1043255, overlap 1043250 AGTTTTGAATTGAAA CTAATCCCCTC TCTCCTT GAGGGGACTAG TTTTGTTTAATATAA TERM 1208 1043283 - 1043255 - R 89 -11.1 -3.75332 | opp_overlap 1043250 1043255 AGTTTTGAATTGAAA CTAATCCCCTC TCTCCTT GAGGGGACTAG TTTTGTTTAATATAA THA_1017 1044261 - 1043290 - | oligopeptide ABC transporter, ATP-binding protein THA_1018 1045217 - 1044258 - | oligopeptide transport ATP-binding protein OppD TERM 1209 1045124 - 1045109 - G 74 -9 -3.29511 | opp_overlap 1045109 CTGATTCTCCGACAA GGCCAA CGGT TTGGCC TTTTTCTATATTTAA TERM 1210 1045109 - 1045124 + g 100 -9 -5.14985 | opp_overlap 1045109 CTGATTCTCCGACAA GGCCAA CGGT TTGGCC TTTTTCTATATTTAA THA_1019 1046094 - 1045222 - | oligopeptide ABC transporter, permease protein THA_1020 1047113 - 1046106 - | oligopeptide ABC transporter, permease protein TERM 1211 1047132 - 1047158 + r 90 -12.3 -3.27498 | opp_overlap 1047133, overlap 1047133 1047135 ATCTCCTCCTTTAAA ATATCCCGCCC GCAAG GGGCGGGATAC TTCATATAACCTATA TERM 1212 1047157 - 1047133 - R 100 -15.8 -4.07568 | opp_overlap 1047133 1047132 1047135 TCTCCTCCTTTAAAA TATCCCGCCC GCAAG GGGCGGGATA CTTCATATAACCTAT TERM 1213 1047133 - 1047157 + r 100 -15.8 -2.56177 | opp_overlap 1047133, overlap 1047132 1047135 TCTCCTCCTTTAAAA TATCCCGCCC GCAAG GGGCGGGATA CTTCATATAACCTAT TERM 1214 1047135 - 1047155 + r 100 -14 -2.81725 | opp_overlap 1047133, overlap 1047133 1047132 TCCTCCTTTAAAATA TCCCGCCC GCAAG GGGCGGGA TACTTCATATAACCT THA_1021 1048679 - 1047177 - | oligopeptide ABC transporter, periplasmic oligopeptide-binding protein TERM 1215 1048290 - 1048242 - G 82 -8 -4.49906 | opp_overlap 1048251 CAATACTGAAACAAA TGCTGA-AAATTTACTTTTTAAAG TTA CTCT-AAAAGTAAATTTGTCAACA ACTTCTGTTTTTTCA TERM 1216 1048792 - 1048782 - H 70 -4 -5.06585 | opp_overlap 1048782 TAAACTAGAGAAAAA CAAA AAC TTTG TTAATATACAAAAAT TERM 1217 1049040 - 1049062 + G 90 -4.9 -5.69976 | opp_overlap 1049047 ATGAAGAAGGATTTA GAGGGAAGA AAAAA TTTTCTCTC TTTTGTTTTTTTTCT TERM 1218 1049071 - 1049095 + G 70 -3.7 -5.04385 | TTCTCTCTTTTGTTT TTTTTCTATTT TAG AAAGAGGAAAA TTTTTTAAAAATATG THA_1022 1048919 - 1049641 + | cas crispr-associated protein Cas6 THA_1023 1049654 - 1049788 + | hypothetical protein TERM 1219 1049840 - 1049863 + T 100 -14 -5.1166 | opp_overlap 1049840 AAAATCAATAAAAAA TAATGGCTCC TTGT GGAGCCATTA TTTTTGGTTTTGCTA TERM 1220 1049863 - 1049840 - T 100 -14 -5.61689 | opp_overlap 1049840 AAAATCAATAAAAAA TAATGGCTCC TTGT GGAGCCATTA TTTTTGGTTTTGCTA THA_1024 1050729 - 1049890 - | protein YddE THA_1025 1051190 - 1050726 - | bacterioferritin comigratory protein, AhpC/TSA family TERM 1221 1051042 - 1051052 + g 70 -5.4 -4.62336 | opp_overlap 1051042 ATCATATCTCTAAAA GAAC AAA GTTC TTTTTCACATACACT THA_1026 1051324 - 1051698 + | CoA-binding protein TERM 1222 1051780 - 1051769 - g 83 -2.2 -5.99154 | GATGAAACAAAAAAA GAAC TTTT GTCC ATTAAAGATAATGAA TERM 1223 1053005 - 1052990 - g 71 -3.2 -5.31275 | GGTTATTACAAAAAA CAAGGA AAAA CCCTCG TGGACGTCTTAAATG THA_1027 1051703 - 1053421 + | phosphoglucomutase/phosphomannomutase family protein TERM 1224 1053457 - 1053443 - T 100 -11.4 -4.3453 | opp_overlap 1053443 AATTTTAAAGAGAAA CCCCCA AAT TGGGGG TTTTTTAAATTATAT TERM 1225 1053443 - 1053457 + T 100 -11.4 -5.20154 | opp_overlap 1053443 AATTTTAAAGAGAAA CCCCCA AAT TGGGGG TTTTTTAAATTATAT THA_1028 1054770 - 1053514 - | sensory box protein TERM 1226 1053682 - 1053710 + g 72 -4.8 -5.00923 | gap 2, overlap 1053684 1053685 AAAATCTGCTTTATC TCTCTTTCCGGATT TAA AATC-GGAAAG-GA TTTTGTTTACTATTT TERM 1227 1055205 - 1055227 + G 76 -5 -5.08169 | CTTCGTTTTCAAATT CAATAATC ATTCAGG GATTATTG TTTTTTGCACTGTAT THA_1029 1054925 - 1056151 + | zn-dependent protease with chaperone function TERM 1228 1056189 - 1056215 + T 100 -12.5 -5.82281 | opp_overlap 1056189 AAAATAAATAAAAAA GCTACACTTTT TCATT AAAAGTGTAGC TTTTTTTATGTATTT TERM 1229 1056215 - 1056189 - T 100 -12.5 -5.88476 | opp_overlap 1056189 AAAATAAATAAAAAA GCTACACTTTT TCATT AAAAGTGTAGC TTTTTTTATGTATTT THA_1030 1056540 - 1056406 - | hypothetical protein THA_1031 1056689 - 1056994 + | hypothetical protein TERM 1230 1057401 - 1057411 + G 70 -5.4 -4.55887 | opp_overlap 1057401 1057399 CAATGTAGAAAATTA GCAA ACC TTGC TTTATATTTTTACAA THA_1032 1056981 - 1057736 + | hypothetical protein THA_1033 1057720 - 1059084 + | hypothetical protein THA_1034 1059089 - 1060171 + | secretin and TonB N terminus short domain protein THA_1035 1060175 - 1061509 + | secretin and TonB N terminus short domain protein THA_1036 1061925 - 1061506 - | hypothetical protein TERM 1231 1061929 - 1061917 - G 89 -3.5 -6.09888 | overlap 1061918 TGCTAATAAAAAAAA TTTTT TCA AAAAA ATCACTCCTTTTTAT TERM 1232 1061980 - 1061962 - R 100 -14.6 -4.75289 | opp_overlap 1061962 TATTATAATATAAAA GCCACCCA AAT TGGGTGGC TTTATTGCAATTTCA TERM 1233 1061962 - 1061980 + r 100 -14.6 -4.23104 | opp_overlap 1061962 TATTATAATATAAAA GCCACCCA AAT TGGGTGGC TTTATTGCAATTTCA THA_1037 1062463 - 1062005 - | hypothetical protein TERM 1234 1062475 - 1062492 + r 70 -4.3 -4.81523 | TCATACTTTCCCTCC TTTAAAT TGTG ATTTAAA TTTTCATTTTTAATT TERM 1235 1062606 - 1062661 + r 84 -5.6 -5.50313 | opp_overlap 1062594 1062622, overlap 1062617 1062622 AGATCTTTTTTTAAT TATAAAAAAAAAAAAACGGGACTTCT ATTT AGAAGCCCCGTTTTATATAATTTGTA TTTTTTAATTTTCTA TERM 1236 1062617 - 1062650 + r 84 -11.1 -3.13392 | opp_overlap 1062622, overlap 1062606 1062622 TAATTATAAAAAAAA AAAAACGGGACTTCT ATTT AGAAGCCCCGTTTTA TATAATTTGTATTTT TERM 1237 1062622 - 1062645 + r 100 -11 -4.65584 | opp_overlap 1062622, overlap 1062617 1062606 ATAAAAAAAAAAAAA CGGGACTTCT ATTT AGAAGCCCCG TTTTATATAATTTGT TERM 1238 1062645 - 1062622 - R 100 -13.2 -7.00209 | opp_overlap 1062617 1062606 1062622 ATAAAAAAAAAAAAA CGGGACTTCT ATTT AGAAGCCCCG TTTTATATAATTTGT THA_1038 1064348 - 1062666 - | alkaline protease A cobO 1064990 - 1064481 - | cob(I)alamin adenosyltransferase THA_1040 1065570 - 1064992 - | putative aminotransferase cobD 1066763 - 1065921 - | cobalamin biosynthesis protein CobD cobQ 1068147 - 1066744 - | cobyric acid synthase CobQ TERM 1239 1066875 - 1066893 + g 85 -7.6 -4.83615 | AGTAACCCCTTTGTA TTCTTAAA AAG TTTAAGAA TTTTTCTAGAAAATC TERM 1240 1067236 - 1067218 - G 73 -3.8 -5.28942 | opp_overlap 1067208 1067207 1067219, overlap 1067219 TATGCCAAATAAAAA TGCACCTT TTG AAAGTGCC TTTTTGATTTGATTA TERM 1241 1067235 - 1067219 - G 71 -7.3 -3.76281 | opp_overlap 1067208 1067207 1067219, overlap 1067218 ATGCCAAATAAAAAT GCACCTT TTG AAAGTGC CTTTTTGATTTGATT TERM 1242 1067959 - 1067989 + g 75 -9.1 -2.91924 | gap 1, overlap 1067957 1067958 TGGTTTTTTGTTGCA GGCAATTGC-CTGT ATAT ACTGTGCAATTGCC ATTTCTCCACCGTCA cobS 1068846 - 1068148 - | cobalamin-5-phosphate synthase TERM 1243 1068233 - 1068245 + g 70 -4.1 -4.88228 | GTTACACCACCAATT TTGCT AGT AGCGA TTTTTGATATTAAAT TERM 1244 1068632 - 1068619 - G 70 -5.3 -4.57341 | AAGTGTGTCTAAAAA TCCAT CGAA ATGGA AAAGGTCAAAAAAAT THA_1044 1069454 - 1068843 - | xylose isomerase domain protein TIM barrel, putative TERM 1245 1069266 - 1069286 + g 76 -2.5 -5.51165 | GTCTGTTGGAAGGTG TACGGTGTA TTC TAGTCCGTA TTTTTTTGAGATTTT THA_1045 1069948 - 1069451 - | bifunctional adenosylcobalamin biosynthesis protein CobP TERM 1246 1069858 - 1069845 - G 74 -6.7 -4.25283 | ATCTCTTCATCAAAA GCAAC ACCA GTTGC AATAAATGCCTTTTT cobT1 1070886 - 1069945 - | nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase TERM 1247 1070817 - 1070830 + g 80 -2.4 -5.79595 | TGTCCTTGAACATTG GCAA TGGAAT TTGC TTTTTTATTTTAAAA THA_1047 1071062 - 1070883 - | hypothetical protein TERM 1248 1071302 - 1071292 - H 86 -4 -5.74684 | opp_overlap 1071293, overlap 1071293 1071294 TAATAAAAACAAAAA TTTC CCC GAAA TGCCCTAGCATTCGG TERM 1249 1071523 - 1071497 - H 82 -10.9 -2.7224 | opp_overlap 1071502, overlap 1071502 1071504 CTATATTATATACTA TAAAAGGCCGG TTAGC CCGGCCTTTTG GTCGGGGTGACTGGA TERM 1250 1071502 - 1071518 + H 100 -10.8 -4.26076 | opp_overlap 1071497 1071502 1071504 TTATATACTATAAAA GGCCGG TTAGC CCGGCC TTTTGGTCGGGGTGA TERM 1251 1071518 - 1071502 - H 100 -10.8 -4.53163 | opp_overlap 1071502, overlap 1071497 1071504 TTATATACTATAAAA GGCCGG TTAGC CCGGCC TTTTGGTCGGGGTGA TERM 1252 1071922 - 1071892 - g 75 -9.2 -3.02861 | opp_overlap 1071890 1071893 AATTCAAGAAGGACA TTCCATTTGAAATT TCA AATTCCAAATGGAT ATAGTTATGTATATT TERM 1253 1071893 - 1071921 + G 79 -10.5 -3.01309 | opp_overlap 1071892, overlap 1071890 ATTCAAGAAGGACAT TCCATTTGAAATT TCA AATTCCAAATGGA TATAGTTATGTATAT TERM 1254 1072259 - 1072245 - g 70 -5 -4.57341 | overlap 1072252 AATGCTTTCGAAAAA CACAAA TTT TTTGCG GAAAAATGCATACGT THA_1049 1071730 - 1073202 + | diguanylate cyclase THA_1050 1073775 - 1073203 - | hypothetical protein TERM 1255 1073352 - 1073362 + g 75 -4 -5.32699 | opp_overlap 1073352 TTTCATCGTATATAA TGAA TTT TTCA TTTTTTAGTCTTTCA THA_1051 1074936 - 1073776 - | radical SAM superfamily protein TERM 1256 1074248 - 1074275 + g 100 -8.7 -5.75478 | TTAAGCTTATATATT TTATAGAGTTT GCTTGA AAACTCTATAA TTTTTTTATCTGATT TERM 1257 1076385 - 1076373 - g 72 -7.7 -3.64049 | TCAATAACTGGCAAA GTTGG GGA CCAAC AAAGGTTATACCGAA TERM 1258 1076858 - 1076807 - g 95 -11.2 -3.8046 | opp_overlap 1076817, overlap 1076808 TTGAAAAATCTTAAA CTTGCTAAGAATTATCCATTTGAA GTTT TTCAAATAGATGACTCTTGGCAAA AAGACATAGGAGATT TERM 1259 1076857 - 1076808 - g 100 -12.5 -2.87553 | opp_overlap 1076817, overlap 1076807 TGAAAAATCTTAAAC TTGCTAAGAATTATCCATTTGAA GTTT TTCAAATAGATGACTCTTGGCAA AAAGACATAGGAGAT THA_1053 1076246 - 1077772 + | alpha-galactosidase TERM 1260 1077799 - 1077770 - T 85 -6.6 -5.12707 | gap 2, opp_overlap 1077771 1077774 1077776, overlap 1077773 1077776 TTAAAGGGTAAAAAA TAAGAATGCGTCCC AGCT GGGACGCAT-C-TA TTTATTATAACTTGA TERM 1261 1077771 - 1077799 + T 85 -8.2 -4.35604 | gap 1, opp_overlap 1077770 1077773 1077776, overlap 1077774 1077776 TAAAGGGTAAAAAAT AAGAATGCGTCCC AGCT GGGACGCAT-CTA TTTATTATAACTTGA TERM 1262 1077797 - 1077773 - T 100 -10.8 -4.63993 | gap 1, opp_overlap 1077771 1077774 1077776, overlap 1077770 1077776 AAGGGTAAAAAATAA GAATGCGTCCC AGCT GGGACGCAT-C TATTTATTATAACTT TERM 1263 1077774 - 1077797 + T 90 -11 -3.77491 | opp_overlap 1077773 1077770 1077776, overlap 1077771 1077776 AGGGTAAAAAATAAG AATGCGTCCC AGCT GGGACGCATC TATTTATTATAACTT TERM 1264 1077795 - 1077776 - T 100 -13.6 -4.40692 | opp_overlap 1077776 1077774 1077771, overlap 1077773 1077770 GGTAAAAAATAAGAA TGCGTCCC AGCT GGGACGCA TCTATTTATTATAAC TERM 1265 1077776 - 1077795 + T 100 -13.6 -3.45784 | opp_overlap 1077773 1077770 1077776, overlap 1077774 1077771 GGTAAAAAATAAGAA TGCGTCCC AGCT GGGACGCA TCTATTTATTATAAC glyA 1079078 - 1077804 - | serine hydroxymethyltransferase THA_1055 1079342 - 1079470 + | hypothetical protein THA_1056 1079467 - 1079892 + | prepilin-type N- cleavage/methylation domain protein TERM 1266 1079931 - 1079914 - f 73 -8.4 -3.49102 | opp_overlap 1079914 ATAGTTTTTAGATAA GCCCTC TTAAAT GAGGGC TTTTTTCTTTGAATA TERM 1267 1079914 - 1079931 + F 100 -8.4 -5.65927 | opp_overlap 1079914 ATAGTTTTTAGATAA GCCCTC TTAAAT GAGGGC TTTTTTCTTTGAATA TERM 1268 1079967 - 1079991 + G 76 -5.2 -5.0538 | opp_overlap 1079967 GAAAATAAGAGAATA TTCTTTTTAA TTAGT TTAGAAAGAA TTTTTTGGACTAAAA THA_1057 1079940 - 1080059 + | hypothetical protein TERM 1269 1080077 - 1080043 - f 91 -12.4 -3.48276 | GTCTTTTTTATATAA TTAGGTTAGTTGATTG AAA CAACCAACTAACATAA AGGGGTAGGTAGAAT THA_1058 1080091 - 1081119 + | transcriptional regulator, XylR-related THA_1059 1081112 - 1082446 + | beta-N-acetylglucosaminidase CbsA THA_1060 1082443 - 1083654 + | extracellular solute-binding protein, family 1, putative TERM 1270 1083684 - 1083658 - f 100 -8.6 -5.34365 | opp_overlap 1083660 1083663, overlap 1083659 1083660 GGAGAAGAATAAAAA TTTCCCCTGCCC AAA AGGCAGGGGATT TTGGGGTGGTTATTT TERM 1271 1083683 - 1083659 - f 100 -12.1 -3.78992 | opp_overlap 1083660 1083663, overlap 1083658 1083660 GAGAAGAATAAAAAT TTCCCCTGCCC AAA AGGCAGGGGAT TTTGGGGTGGTTATT TERM 1272 1083682 - 1083660 - f 100 -15.6 -2.85769 | opp_overlap 1083660 1083663, overlap 1083659 1083658 AGAAGAATAAAAATT TCCCCTGCCC AAA AGGCAGGGGA TTTTGGGGTGGTTAT TERM 1273 1083660 - 1083682 + F 100 -14.9 -4.17425 | opp_overlap 1083660 1083659 1083658, overlap 1083663 AGAAGAATAAAAATT TCCCCTGCC CAAAA GGCAGGGGA TTTTGGGGTGGTTAT THA_1061 1083690 - 1084577 + | inner membrane protein THA_1062 1084574 - 1085758 + | sugar ABC transporter permease THA_1063 1085755 - 1086663 + | SIS domain protein TERM 1274 1086650 - 1086640 - f 70 -4 -4.96762 | opp_overlap 1086640, overlap 1086634 GATAGACCAGAAAAA CTTT CAA AAAG TGTGATAATCTGAAG TERM 1275 1087193 - 1087209 + G 74 -8.1 -3.63744 | overlap 1087192 GTATCAATAGGTCAT TCAAATG CTA CATTTGA TATTTTCAAAAAAGC TERM 1276 1087634 - 1087621 - g 72 -8.1 -3.29511 | GGTATCTTCTTATAA CGCTC TAAA GAGCG TAGGTATAGATGGGG THA_1064 1086674 - 1087726 + | N-acetylglucosamine-6-phosphate deacetylase TERM 1277 1087960 - 1087991 + F 83 -6 -5.31519 | gap 1, opp_overlap 1087961, overlap 1087961 GCCTAAGGTGTAACA ATTCCAC-AAAAGCT AGG GGCTTTTTGTGGAAA TTTTTGTTTAGATAT TERM 1278 1087990 - 1087961 - f 77 -8.8 -3.65314 | gap 1, opp_overlap 1087961 1087960 CCTAAGGTGTAACAA TTCCAC-AAAAGC TAGGG GCTTTTTGTGGAA ATTTTTGTTTAGATA TERM 1279 1087961 - 1087990 + F 83 -9.5 -3.77285 | gap 1, opp_overlap 1087961, overlap 1087960 CCTAAGGTGTAACAA TTCCAC-AAAAGCT AGG GGCTTTTTGTGGAA ATTTTTGTTTAGATA TERM 1280 1088295 - 1088281 - g 75 -7.2 -4.15044 | opp_overlap 1088281 1088279 TGGTGCTGCAATAAA TGTCTT TTC AAGACA TGTTGGTGCAAAGGT cobT2 1088027 - 1089061 + | nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase cbiX 1089058 - 1089405 + | sirohydrochlorin cobaltochelatase THA_1067 1089392 - 1090009 + | cobalt-precorrin-8X methylmutase cbiD 1090011 - 1091066 + | cobalamin biosynthesis protein CbiD cbiE 1091063 - 1091662 + | precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit TERM 1281 1091819 - 1091836 + G 72 -4.9 -4.87626 | opp_overlap 1091816, overlap 1091828 TTTCAATAGAAGCCT CCTTTTT GTGC AAGAAGG TTTTTGCTGTTGAAA THA_1070 1091668 - 1092213 + | decarboxylating precorrin-6Y C5,15-methyltransferase THA_1071 1092262 - 1092858 + | precorrin-2 methyltransferase cobM 1092859 - 1093617 + | precorrin-4 C11-methyltransferase THA_1073 1093589 - 1094581 + | CbiG cbiH 1094588 - 1095298 + | cobalamin biosynthesis protein cobK 1095295 - 1096032 + | precorrin-6x reductase TERM 1282 1097063 - 1097053 - g 75 -4 -5.22006 | TGAGGATAACAAAAA TCTT GAA AAGA TAAAGGAAAGTCTTA hemA 1096022 - 1097140 + | glutamyl-tRNA reductase TERM 1283 1097797 - 1097831 + G 76 -6.6 -4.48987 | opp_overlap 1097791 1097804, overlap 1097804 GATACAGAATTTGTT TCAAAAATAGAAAGAA AAG TTCTTTCTATTTCAGG TTTTGATTGTAACAC TERM 1284 1097804 - 1097824 + G 86 -9.9 -3.78087 | opp_overlap 1097804, overlap 1097797 AATTTGTTTCAAAAA TAGAAAGAA AAG TTCTTTCTA TTTCAGGTTTTGATT TERM 1285 1097824 - 1097804 - g 100 -9.9 -4.57341 | opp_overlap 1097797 1097804 AATTTGTTTCAAAAA TAGAAAGAA AAG TTCTTTCTA TTTCAGGTTTTGATT hemC 1097137 - 1097979 + | porphobilinogen deaminase THA_1078 1097970 - 1099358 + | uroporphyrinogen III synthase/methyltransferase hemB 1099362 - 1100318 + | delta-aminolevulinic acid dehydratase THA_1080 1100300 - 1100746 + | siroheme synthase TERM 1286 1100964 - 1100952 - g 88 -3.3 -6.08342 | opp_overlap 1100955 1100961, overlap 1100956 GAAGAAATAAAAAAA CAAGC AGA GCTGG GAACCAGTTATGGTT hemL 1100739 - 1102010 + | glutamate-1-semialdehyde-2,1-aminomutase cbiM 1102007 - 1102714 + | cobalamin biosynthesis protein CbiM THA_1083 1102714 - 1103013 + | cobalt transport protein CbiN TERM 1287 1103307 - 1103336 + G 75 -5.9 -4.79683 | overlap 1103332 CATGTATACTTTTTC TAATATTTACAAC TCCA GTTGTTGATATTA TTTCTTTTATACATT THA_1084 1102988 - 1103677 + | cobalt ABC transporter, permease protein CbiQ, putative THA_1085 1103664 - 1104392 + | cobalt ABC transporter, ATP-binding protein THA_1086 1104394 - 1105029 + | protein containing ATP-binding domain TERM 1288 1105027 - 1105056 + T 100 -12.3 -3.84278 | opp_overlap 1105031, overlap 1105031 GTTTTAGAACTTGAG TAAAGGAATTCCC ACCT GGGAATTCCTTAA TTATTGGTTGACTTT TERM 1289 1105031 - 1105052 + T 100 -13.1 -3.58329 | opp_overlap 1105031, overlap 1105027 TAGAACTTGAGTAAA GGAATTCCC ACCT GGGAATTCC TTAATTATTGGTTGA TERM 1290 1105052 - 1105031 - T 100 -13.1 -3.77206 | opp_overlap 1105027 1105031 TAGAACTTGAGTAAA GGAATTCCC ACCT GGGAATTCC TTAATTATTGGTTGA THA_1087 1105816 - 1105115 - | iron-sulfur flavoprotein rnhA 1106346 - 1105813 - | RNase H TERM 1291 1105942 - 1105959 + g 76 -3.5 -5.38054 | TTTTACCTTTATGTC TTTTGCA TAAT TGTAAAA TTTTTCTTTGTAGAC TERM 1292 1106355 - 1106365 + H 86 -4 -5.75538 | opp_overlap 1106346, overlap 1106346 AAAACACTTGAAGTT TCAA GAT TTGA TTTTTCTTTTTTAAG TERM 1293 1106606 - 1106588 - H 100 -7.4 -6.17669 | AAGAAAACAAAAAAA GTCTGGAT AAA ATCCCGAC TCTACCATTTAACGG TERM 1294 1107206 - 1107187 - H 95 -10.7 -4.44046 | opp_overlap 1107187 1107175 TTTATTTTAAATAAA GCCAGGC TTGGTG GCCTGGC TTTGAGAAAAAGTTA TERM 1295 1107187 - 1107206 + H 90 -11.4 -3.53761 | opp_overlap 1107187, overlap 1107175 TTTATTTTAAATAAA GCCAGGCT TGGT GGCCTGGC TTTGAGAAAAAGTTA THA_1089 1107883 - 1108098 + | hypothetical protein TERM 1296 1108195 - 1108169 - T 100 -14.6 -4.18494 | opp_overlap 1108169 1108173, overlap 1108173 CATTTTGAGGTAAAA TAAAGGCGACCT TGG AAGTCGCCTTTA TTTATTCCCATTCAA TERM 1297 1108169 - 1108195 + T 100 -12.4 -4.20918 | opp_overlap 1108169 1108173, overlap 1108173 CATTTTGAGGTAAAA TAAAGGCGACCT TGG AAGTCGCCTTTA TTTATTCCCATTCAA TERM 1298 1108173 - 1108191 + T 89 -8.8 -4.68209 | opp_overlap 1108169 1108173, overlap 1108169 TTGAGGTAAAATAAA GGCGACCT TGG AAGTCGCC TTTATTTATTCCCAT TERM 1299 1108191 - 1108173 - T 100 -11 -4.68908 | opp_overlap 1108173 1108169, overlap 1108169 TTGAGGTAAAATAAA GGCGACCT TGG AAGTCGCC TTTATTTATTCCCAT THA_1090 1109738 - 1108197 - | GMP synthase: glutamine-hydrolyzing TERM 1300 1108493 - 1108505 + g 77 -7.7 -4.07789 | opp_overlap 1108492, overlap 1108492 CAATGAATATATGAT CTGCA TGT TGCAG TATTTTTATAGCTTC THA_1091 1110367 - 1109816 - | LemA family protein THA_1092 1112132 - 1110390 - | hypothetical protein TERM 1301 1111013 - 1111030 + g 76 -3.5 -5.44119 | overlap 1111014 AGTCTTTAGCAAGTT TTTTATC CTTA GATAAAG TTTTTTTAAGCTGCG TERM 1302 1112295 - 1112267 - R 77 -8.1 -3.91984 | opp_overlap 1112267 ACACTTTTCAAACAA CATGGTTTCGGTA TTC CACCGGAGCCATG TTTTTTAACCTTGCC TERM 1303 1112267 - 1112295 + r 100 -11.8 -5.09426 | opp_overlap 1112267 ACACTTTTCAAACAA CATGGTTTCGGT ATTCC ACCGGAGCCATG TTTTTTAACCTTGCC TERM 1304 1113296 - 1113309 + r 71 -5.3 -4.67982 | opp_overlap 1113296 AAAGAGAAGCAATAG TCTTC TTAG GAAGA TTTTCTTCAATGAAA TERM 1305 1113435 - 1113397 - R 83 -6.9 -4.8622 | gap 2, opp_overlap 1113397 TTTGCCAATGAAAAA CACCCCCTAGATAGTTATA TTT TATCACT-TCC-GGGGGTG TTTTTTATTTCGTTC TERM 1306 1113397 - 1113435 + r 90 -4.7 -5.72053 | gap 2, opp_overlap 1113397 TTTGCCAATGAAAAA CACCCCCTAGATAGTTATA TTT TATCACT-TCC-GGGGGTG TTTTTTATTTCGTTC THA_1093 1114042 - 1113497 - | iodotyrosine dehalogenase 1 TERM 1307 1113861 - 1113872 + g 71 -3 -5.24291 | TCTTTTTCTTCCACA GATT TTCT AATC TTTTCTTTTAGTTTT THA_1094 1116369 - 1114048 - | 5-methyltetrahydrofolate S-homocysteine methyltransferase TERM 1308 1114566 - 1114596 + g 77 -5.6 -4.86939 | overlap 1114590 AAAGAATATTTTGAC TTATTTGAAGAGGA GAA TATTCTTCAAGTAA TTTTTCAATTTCTTG TERM 1309 1114590 - 1114611 + g 77 -4.5 -5.3167 | overlap 1114566 GAGGAGAATATTCTT CAAGTAATT TTTC AATTTCTTG TTTTATTTCTTTTTC THA_1095 1116918 - 1116373 - | vitamin B12 dependent methionine synthase, activation domain protein THA_1096 1117847 - 1116930 - | 5,10-methylenetetrahydrofolate reductase THA_1097 1118547 - 1117852 - | hypothetical cytosolic protein THA_1098 1119842 - 1118544 - | domain of unknown function protein THA_1099 1120990 - 1119839 - | bifunctional aspartokinase/homoserine dehydrogen ase TERM 1310 1120135 - 1120145 + g 78 -4 -5.38348 | TTTGGAATATATCTA TGTA CTT TACA TTTTTTGGTATTTTT TERM 1311 1121022 - 1121045 + r 100 -12.4 -4.90136 | opp_overlap 1120999 1121022 TTTAAAATAAAAAAA GGCGGCCAGT TTTT ACTGACCGCC TTTTTGCTATTAGTT TERM 1312 1121045 - 1121022 - R 100 -14.6 -6.09196 | opp_overlap 1121022, overlap 1120999 TTTAAAATAAAAAAA GGCGGCCAGT TTTT ACTGACCGCC TTTTTGCTATTAGTT TERM 1313 1121131 - 1121093 - R 78 -6.8 -4.39568 | gap 1, opp_overlap 1121092 AGCTATACAGCAAAA GATAATG-GCGGCCAGT TTTTCC ACATGCCGCACATTATC ATCATATTTACATTT THA_1100 1121199 - 1121080 - | hypothetical protein TERM 1314 1121655 - 1121640 - R 83 -10.4 -3.32343 | opp_overlap 1121630 CTCAGAGGGGGATAA CTGGGG GAAA CCCCAG CTAATACCCCATACG TERM 1315 1122124 - 1122106 - R 71 -6.6 -4.07687 | AGTCCGGTGTGAAAA CTCACGGC TCA ACCGTGGG ACTGCGCTGGAAACT TERM 1316 1123417 - 1123439 + r 79 -10.6 -2.57344 | opp_overlap 1123418, overlap 1123416 AGGGGAGGAGCCTAA ACCAACGTGT AAT ACACGTTGGG GTTGTGGGACAAGTC TERM 1317 1123438 - 1123418 - R 100 -14.1 -3.62096 | opp_overlap 1123417 1123416 GGGGAGGAGCCTAAA CCAACGTGT AAT ACACGTTGG GGTTGTGGGACAAGT TERM 1318 1124494 - 1124466 - R 79 -10.3 -2.53164 | overlap 1124465 1124469 1124484 CCAGGCATGAGTAAG CGAGAGGAGAG TGAGAAT CTCTCCCCCCG AAAGCCTAAGGGTAC TERM 1319 1125662 - 1125646 - R 79 -7.3 -4.48221 | GATCAACGGACAAAA GTTACCC CGG GGATAAC AGGCTAGTCTTGCCC TERM 1320 1126294 - 1126313 + r 100 -9.3 -5.85425 | opp_overlap 1126294 TACCTAATTAATTAA CCTCTCC TTATCC GGAGAGG TTTTTTGTTTGTTTA TERM 1321 1126313 - 1126294 - R 78 -9.3 -3.46081 | opp_overlap 1126294 TACCTAATTAATTAA CCTCTCC TTATCC GGAGAGG TTTTTTGTTTGTTTA TERM 1322 1126336 - 1126362 + r 76 -9.4 -3.16709 | opp_overlap 1126339, overlap 1126335 1126339 TTTGTTTACTATTAA AAATGGCTCCCA TTT TGGGAGCCATAA ATTTTAAAGTTTTAT TERM 1323 1126339 - 1126359 + r 100 -15.5 -2.76693 | opp_overlap 1126339, overlap 1126336 1126335 GTTTACTATTAAAAA TGGCTCCCA TTT TGGGAGCCA TAAATTTTAAAGTTT TERM 1324 1126359 - 1126339 - R 100 -15.5 -4.77036 | opp_overlap 1126339 1126336 1126335 GTTTACTATTAAAAA TGGCTCCCA TTT TGGGAGCCA TAAATTTTAAAGTTT arcC 1127315 - 1126374 - | carbamate kinase TERM 1325 1127213 - 1127195 - G 73 -9 -3.20991 | opp_overlap 1127195 TGTAACCTAATTCAA TCATATCT GCA AGATATGA TGCTGTAACTTTTAT TERM 1326 1127195 - 1127213 + g 70 -9 -2.70391 | opp_overlap 1127195 TGTAACCTAATTCAA TCATATCT GCA AGATATGA TGCTGTAACTTTTAT argF 1128315 - 1127335 - | ornithine carbamoyltransferase TERM 1327 1127527 - 1127537 + g 74 -6.8 -4.33004 | opp_overlap 1127524, overlap 1127524 TAAGAAAATAACGTT CGGA TTT TCCG TTCTTTTAATTAAAT TERM 1328 1128403 - 1128428 + H 81 -9.9 -2.99545 | opp_overlap 1128403, overlap 1128402 1128400 ATCAAAACAAACAAA TCTTGAAAAAC AACA GTTTTTCGAGA ATATTTATTTGTTTT TERM 1329 1128428 - 1128403 - H 87 -7.7 -4.88786 | opp_overlap 1128403 1128402 1128400 ATCAAAACAAACAAA TCTTGAAAAAC AACA GTTTTTCGAGA ATATTTATTTGTTTT THA_1106 1128632 - 1129834 + | arginine deiminase TERM 1330 1129871 - 1129832 - T 100 -15.3 -3.50447 | opp_overlap 1129839, overlap 1129839 CCAATCTGTAGAGAA TAGAAAATTCCCCATCC TAGCTT GGATGGGGAATTTTTTA AAAATAGGTTGCATA TERM 1331 1129839 - 1129864 + T 100 -13.4 -5.03314 | opp_overlap 1129832 1129839 GTAGAGAATAGAAAA TTCCCCATCC TAGCTT GGATGGGGAA TTTTTTAAAAATAGG TERM 1332 1129864 - 1129839 - T 100 -13.4 -4.76963 | opp_overlap 1129839, overlap 1129832 GTAGAGAATAGAAAA TTCCCCATCC TAGCTT GGATGGGGAA TTTTTTAAAAATAGG THA_1107 1130744 - 1129923 - | integrase, catalytic region THA_1108 1131774 - 1131085 - | transcriptional regulator, crp family THA_1109 1134256 - 1131800 - | cyclic diguanylate phosphodiesterase (EAL) domain protein TERM 1333 1133206 - 1133230 + g 100 -10.9 -4.22652 | overlap 1133204 1133209 CTTTTTTTAGTATTT GAAGAATCAAG ATT TTTGATTCTTC TTTTAAATAATCTGG TERM 1334 1133209 - 1133227 + g 74 -6.8 -4.22883 | overlap 1133204 1133206 TTTTTAGTATTTGAA GAATCAAG ATT TTTGATTC TTCTTTTAAATAATC TERM 1335 1134426 - 1134386 - H 100 -13.5 -5.09259 | opp_overlap 1134386 1134389, overlap 1134389 1134391 TATTGTAAAATAAAA GAAGTCCCTCTTCTATTCT TTT AAAATAGAAGAGGGGCTTT TCAGTATAATAGTTT TERM 1336 1134389 - 1134423 + H 100 -15.2 -4.24948 | opp_overlap 1134389 1134386 1134391, overlap 1134386 TGTAAAATAAAAGAA GTCCCTCTTCTATTCT TTT AAAATAGAAGAGGGGC TTTTCAGTATAATAG TERM 1337 1134423 - 1134389 - H 100 -15.2 -4.6313 | opp_overlap 1134386 1134389, overlap 1134386 1134391 TGTAAAATAAAAGAA GTCCCTCTTCTATTCT TTT AAAATAGAAGAGGGGC TTTTCAGTATAATAG TERM 1338 1134421 - 1134391 - H 100 -16.4 -2.60124 | opp_overlap 1134386 1134389, overlap 1134389 1134386 TAAAATAAAAGAAGT CCCTCTTCTATTCT TTT AAAATAGAAGAGGG GCTTTTCAGTATAAT TERM 1339 1134443 - 1134455 + H 72 -3.5 -5.2166 | CAGTATAATAGTTTT TTTAA ATT TTAAA TTTTTTGACTTCTTC TERM 1340 1134537 - 1134551 + H 74 -6.4 -4.40237 | overlap 1134539 TTCACTTGTTTTTGC TTGGCT TTG AGCCGA TTTTGCTATATCATC TERM 1341 1134629 - 1134640 + H 72 -5.8 -4.44667 | CGCTACTCATTTCTT GTGC AGAT GCAC TTTGTTGTTGAGAGC TERM 1342 1136708 - 1136689 - H 93 -6.6 -5.3321 | AAGCAATAATAAAAA TTTCAATA AAAA TATTGAAA GATATGAAATTTCTA THA_1112 1136775 - 1137344 + | hypothetical protein THA_1113 1137376 - 1138455 + | glucose-1-phosphate thymidylyltransferase THA_1114 1138464 - 1139285 + | HAD hydrolase, IIB family TERM 1343 1139658 - 1139681 + G 90 -9.6 -3.90416 | opp_overlap 1139657 1139656, overlap 1139656 1139679 AAAATCTGTAGAACT TGGGCAAGAT CAAT ACCTTGCCCA TCTTTTATATGGTAT THA_1115 1139287 - 1139964 + | tetratricopeptide repeat domain protein hisS 1139949 - 1141205 + | histidyl-tRNA synthetase THA_1117 1141210 - 1141530 + | hypothetical protein TERM 1344 1141542 - 1141573 + T 100 -19 -3.42458 | opp_overlap 1141531 1141547, overlap 1141547 GTGATAGTTTTAGAC TAAAAGAGAGAGGG GGTT CCCTCTCTCTTTTA TTGCATTTCTTCTTT TERM 1345 1141547 - 1141568 + T 100 -14.5 -4.76213 | opp_overlap 1141547, overlap 1141542 AGTTTTAGACTAAAA GAGAGAGGG GGTT CCCTCTCTC TTTTATTGCATTTCT TERM 1346 1141568 - 1141547 - T 100 -14.5 -4.3467 | opp_overlap 1141547 1141542 AGTTTTAGACTAAAA GAGAGAGGG GGTT CCCTCTCTC TTTTATTGCATTTCT THA_1118 1143259 - 1141571 - | Na+/H+ antiporter family protein TERM 1347 1142259 - 1142230 - G 83 -10.1 -3.57462 | GAGCTGATGCCCAAA TTAGTGCTGCAGA AGCA TCTGCATCACCAA AAGCATTTCTAATTC THA_1119 1143562 - 1144095 + | hypothetical protein THA_1120 1144095 - 1144730 + | hypothetical protein THA_1121 1144705 - 1145448 + | ABC transporter, ATP-binding protein TERM 1348 1146156 - 1146171 + G 71 -3.3 -5.20154 | opp_overlap 1146168, overlap 1146168 GCATGGAGTTTTATT TCAAC AAAAAC GTTGA TTTTTTCAATTATAT THA_1122 1145460 - 1146956 + | hypothetical protein TERM 1349 1146961 - 1146986 + T 100 -16.3 -3.66883 | opp_overlap 1146961 1146964, overlap 1146964 GATTATCATAATTAA GAACTCCCCTT AGAA AAGGGGAGTTC TTTAAAGTATATTAA TERM 1350 1146986 - 1146961 - T 100 -16.3 -3.48036 | opp_overlap 1146961 1146964, overlap 1146964 GATTATCATAATTAA GAACTCCCCTT AGAA AAGGGGAGTTC TTTAAAGTATATTAA TERM 1351 1146983 - 1146964 - T 100 -12.2 -3.86981 | opp_overlap 1146961 1146964, overlap 1146961 TATCATAATTAAGAA CTCCCCTT AGAA AAGGGGAG TTCTTTAAAGTATAT TERM 1352 1146964 - 1146983 + T 100 -12.2 -3.9578 | opp_overlap 1146964 1146961, overlap 1146961 TATCATAATTAAGAA CTCCCCTT AGAA AAGGGGAG TTCTTTAAAGTATAT glpX 1148017 - 1146998 - | fructose-1,6-bisphosphatase, class II THA_1124 1148803 - 1148126 - | RNA pseudouridine synthase family protein folP 1149638 - 1148808 - | dihydropteroate synthase THA_1126 1149767 - 1150543 + | thermostable monoacylglycerol lipase THA_1127 1150585 - 1151601 + | aspartate aminotransferase, putative THA_1128 1151598 - 1152308 + | LicC-like protein THA_1129 1152305 - 1152967 + | hypothetical protein TERM 1353 1153101 - 1153070 - g 70 -6 -4.20707 | CTGGATTAAAAAATA TACCAGCATATATA TTTG TTTATACGCTAGTA GGTTATATTTTAATG THA_1130 1152964 - 1153938 + | hypothetical protein TERM 1354 1154027 - 1154045 + T 75 -2.4 -5.60864 | overlap 1154028 ACCATCTCTTTACTC TTTCCTTT TTT AGAGGAAC TTTTTTTAATATATA THA_1131 1155359 - 1154007 - | transporter, major facilitator family TERM 1355 1154733 - 1154756 + g 76 -6.9 -4.43879 | opp_overlap 1154736 AAATGCTAGTTTCAA GAAGTTTTT TTCGCT AAAAACTTC TTTTAATTCACTAAT TERM 1356 1155298 - 1155284 - G 72 -5 -4.74453 | CAATAGAGGTAAAAA CAACTC CTT GAGTTA AAATAAAATAAAAAT THA_1132 1156693 - 1155356 - | RtcB protein TERM 1357 1155532 - 1155547 + g 72 -2.6 -5.43866 | overlap 1155544 GAAGGTTTGAAAGTA CTTGAT TTAA ATTAAG TTTTTTTAAAGCTTG THA_1133 1157352 - 1156696 - | ABC transporter, ATP-binding protein cysT 1158073 - 1157342 - | W family TERM 1358 1157999 - 1157966 - G 77 -7.5 -4.35663 | opp_overlap 1157968, overlap 1157968 1157969 AACAAGATCAATAAA GACCCTCCCTACA GAGATTGG TGTAGGGAGGATG AGTTGAGAATCTATT TERM 1359 1157997 - 1157968 - G 86 -10.1 -3.76167 | opp_overlap 1157968, overlap 1157966 1157969 CAAGATCAATAAAGA CCCTCCCTACA GAGATTGG TGTAGGGAGGA TGAGTTGAGAATCTA TERM 1360 1157996 - 1157969 - G 85 -11.4 -2.84616 | opp_overlap 1157968, overlap 1157968 1157966 AAGATCAATAAAGAC CCTCCCTACA GAGATTGG TGTAGGGAGG ATGAGTTGAGAATCT THA_1135 1158978 - 1158070 - | hypothetical protein THA_1136 1160049 - 1158994 - | carbohydrate esterase, family 1 TERM 1361 1159783 - 1159803 + g 76 -6.9 -4.36903 | GAATATACGTGCAAT TCTGACACT TTT AGTTTCAGA TTTCTCTTTGCTGCC TERM 1362 1160085 - 1160056 - R 78 -2.2 -5.75342 | opp_overlap 1160083, overlap 1160075 1160077 1160083 TTTTTTCAAAAAAAA GCCTCCTTATAT ATTATA ACACAAAAAGGC CTCTTAAAAGAGGCC TERM 1363 1160108 - 1160075 - R 91 -12.5 -3.49777 | opp_overlap 1160083, overlap 1160056 1160077 1160083 CCTTATATATTATAA CACAAAAAGGCCTCT TAAA AGAGGCCTTTTGGAG CAGGCGGTGGGACTC TERM 1364 1160106 - 1160077 - R 100 -13.7 -3.32109 | opp_overlap 1160083, overlap 1160056 1160075 1160083 TTATATATTATAACA CAAAAAGGCCTCT TAAA AGAGGCCTTTTGG AGCAGGCGGTGGGAC TERM 1365 1160100 - 1160083 - R 100 -11.3 -5.16133 | opp_overlap 1160083, overlap 1160056 1160077 1160075 ATTATAACACAAAAA GGCCTCT TAAA AGAGGCC TTTTGGAGCAGGCGG TERM 1366 1160083 - 1160100 + r 100 -11.3 -4.07568 | opp_overlap 1160056 1160083 1160077 1160075 ATTATAACACAAAAA GGCCTCT TAAA AGAGGCC TTTTGGAGCAGGCGG THA_1138 1160539 - 1160210 - | hypothetical protein THA_1139 1161732 - 1160608 - | hypothetical protein THA_1140 1162728 - 1161736 - | lipoprotein, putative THA_1141 1163752 - 1162748 - | membrane protein THA_1142 1164749 - 1163742 - | L-asparaginase THA_1143 1165447 - 1164746 - | rhomboid family protein THA_1144 1166302 - 1165577 - | hypothetical protein TERM 1367 1166068 - 1166046 - G 95 -8.5 -5.52384 | TTTCCATCAAAAAAA GTGATACCG CCTCC CAGTATCAC AATTACCGAATTCTG TERM 1368 1166211 - 1166182 - G 72 -6.5 -4.33182 | opp_overlap 1166190 1166204, overlap 1166189 1166190 CTATTGATAAAATAA GAAAAAATCGCCA AATT TGGCGTTTTTTTA AAAAATAATATAAAG TERM 1369 1166204 - 1166189 - G 90 -4.6 -5.77677 | opp_overlap 1166190, overlap 1166182 1166190 TAAAATAAGAAAAAA TCGCCA AATT TGGCGT TTTTTTAAAAAATAA TERM 1370 1166203 - 1166190 - G 79 -8.1 -4.02946 | opp_overlap 1166190, overlap 1166189 1166182 AAAATAAGAAAAAAT CGCCA AATT TGGCG TTTTTTTAAAAAATA TERM 1371 1166190 - 1166203 + g 95 -8.1 -5.41143 | opp_overlap 1166190 1166189 1166182 AAAATAAGAAAAAAT CGCCA AATT TGGCG TTTTTTTAAAAAATA THA_1145 1166709 - 1166299 - | hypothetical protein THA_1146 1167955 - 1166720 - | hypothetical protein TERM 1372 1167157 - 1167175 + g 75 -4.6 -5.09225 | overlap 1167152 1167151 CAAGCACTTTTTGGA GAAAATCT TCA AGCTTTTC TTTTTTCCATGAGAT TERM 1373 1167457 - 1167467 + g 76 -2.6 -5.5112 | GAAAGAAACTTTTAA TAAT TTC ATTA TTTTTTATTAATGCA TERM 1374 1167774 - 1167798 + g 100 -13.1 -5.19261 | ACTTTTGTTTCGATT TTTTCGGAAAT AGT ATTTCCGAAAA TTTTTTGATCGGTTT THA_1147 1171419 - 1167952 - | chromosome segregation SMC protein, putative TERM 1375 1168428 - 1168440 + g 76 -3.5 -5.49568 | CATCTGTTTTTTCTA TTAAT TCA ATTAA TTTTTGTTTTGCATT TERM 1376 1170224 - 1170238 + g 72 -4.2 -5.09245 | overlap 1170226 1170234 GTCAAATCAATTATC GACTCT GTT AGAGAC TTTTTCTCGTTTTCA TERM 1377 1170903 - 1170921 + g 83 -2.4 -5.96894 | overlap 1170906 TTGCTTCTGTACCTG CAAGCTTT GAA AGAGCTTC TTTTTTTCTTTCAAT TERM 1378 1170906 - 1170918 + g 72 -4.1 -5.01858 | overlap 1170903 CTTCTGTACCTGCAA GCTTT GAA AGAGC TTCTTTTTTTCTTTC murC 1172717 - 1171416 - | UDP-N-acetylmuramate--alanine ligase THA_1149 1173718 - 1172714 - | UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide)pyrophosphoryl-undecaprenol N-acetylglucosamine transferase THA_1150 1174668 - 1173715 - | glyoxylate reductase TERM 1379 1174925 - 1174913 - g 82 -7.7 -4.5123 | opp_overlap 1174913 AATTTAGGAAATAAA CCTCT CAG AGAGG TTATAGAAGAGAGAA THA_1151 1174775 - 1175485 + | nitroreductase TERM 1380 1177454 - 1177475 + G 72 -6.7 -4.07306 | TTATACCTTTTGTCT TTAGAGTTG GTTA TAACTCTAA TTTATCGTTAAATAT THA_1152 1175530 - 1177968 + | hypothetical protein TERM 1381 1178228 - 1178238 + G 70 -4 -5.00642 | overlap 1178219 GGACCTTTTGGGCAG GTTT CTC AAAC TTTTTCTGTGGATTA THA_1153 1177991 - 1179709 + | FG-GAP repeat domain protein THA_1154 1179711 - 1180043 + | hypothetical protein TERM 1382 1180426 - 1180439 + G 74 -3.1 -5.42514 | GTATATTTAAATGAT GAGGA AAAA TCTTC TTTTTTAATTTATAC THA_1155 1180096 - 1180590 + | prepilin-type N- cleavage/methylation domain protein THA_1156 1180595 - 1181611 + | prepilin-type N- cleavage/methylation domain protein THA_1157 1181624 - 1182079 + | hypothetical protein TERM 1383 1182077 - 1182111 + T 77 -8.8 -3.60412 | opp_overlap 1182080 1182087, overlap 1182080 1182087 GGATGGCCGGGAATC TAATTAAAAATGGGAA GCT TCCCCATTTTTAAATA TCTATTTTTAGTATT TERM 1384 1182080 - 1182108 + T 80 -10.5 -2.60234 | opp_overlap 1182080 1182087, overlap 1182077 1182087 TGGCCGGGAATCTAA TTAAAAATGGGAA GCT TCCCCATTTTTAA ATATCTATTTTTAGT TERM 1385 1182108 - 1182080 - T 100 -12.7 -3.17075 | opp_overlap 1182077 1182080 1182087, overlap 1182087 TGGCCGGGAATCTAA TTAAAAATGGGAA GCT TCCCCATTTTTAA ATATCTATTTTTAGT TERM 1386 1182101 - 1182087 - T 80 -6.4 -4.90013 | opp_overlap 1182080 1182077 1182087, overlap 1182080 GAATCTAATTAAAAA TGGGAA GCT TCCCCA TTTTTAAATATCTAT THA_1158 1182710 - 1182105 - | HAD superfamily hydrolase TERM 1387 1182827 - 1182803 - R 90 -5.7 -5.57054 | opp_overlap 1182803 AATAACTTAAAAAAA TCCCCACTTTC ATT AAATGTGGAGA TTTTTTATAACAATC TERM 1388 1183072 - 1183054 - R 79 -8.2 -3.98484 | AAGGTAAGGTACAAA CTTAATCC CCT GGATCAAG AACACTTTCTTTATA TERM 1389 1184655 - 1184635 - R 100 -12.6 -5.25803 | opp_overlap 1184623 1184635 AAGTGTTATAAAAAA CTCTCCGC CTTTT GCGGAGAG TTTTGATGGTGTTTA TERM 1390 1184635 - 1184655 + r 100 -12.6 -4.37067 | opp_overlap 1184635, overlap 1184623 AAGTGTTATAAAAAA CTCTCCGC CTTTT GCGGAGAG TTTTGATGGTGTTTA THA_1159 1186631 - 1184673 - | methyl-accepting chemotaxis protein 4 TERM 1391 1184712 - 1184732 + g 75 -4.8 -5.07107 | opp_overlap 1184711 1184709, overlap 1184715 TATTGAATTTAACAG CTTTTCAG AAAGC TTGAAAAG TTTTTTAGAAGTTTC TERM 1392 1185473 - 1185487 + g 71 -7.2 -3.71148 | opp_overlap 1185457, overlap 1185458 CTGCTGAAGCATTTG TAGCTT CTG AAGCTA TTTCACTAAATTTTC TERM 1393 1186294 - 1186315 + g 71 -3.1 -5.28176 | AAATCTTCTGGAATT TCTATATTT GGAT ATATATAGA TTTTTTCTCCATCAG TERM 1394 1186334 - 1186350 + g 74 -5.2 -4.86033 | opp_overlap 1186334 TTTCTCCATCAGTAA CATAGA CAAAT TCTATG TTTTTGTAGCCATTT TERM 1395 1187493 - 1187477 - g 87 -10.9 -3.29324 | overlap 1187472 GTTATGGAAACTCAA GGAGTTG GAA CAACTCC AGAACAATTTGAGGA THA_1160 1186961 - 1187962 + | conserved oxidoreductase THA_1161 1187979 - 1188287 + | hypothetical protein THA_1162 1188280 - 1189707 + | threonine synthase THA_1163 1189697 - 1190071 + | D-ornithine aminomutase S component THA_1164 1190064 - 1192256 + | methylmalonyl-CoA mutase, C- domain/subunit TERM 1396 1192304 - 1192272 - f 100 -16.5 -2.50398 | opp_overlap 1192273, overlap 1192279 TAATGAATTTAAGAG TTTAAAAGCGGCCTA TGA TAGGCCGCTTTTAAT TTTTTGGAAAAATCA TERM 1397 1192273 - 1192303 + F 100 -20 -5.0133 | opp_overlap 1192272 1192279 AATGAATTTAAGAGT TTAAAAGCGGCCTA TGA TAGGCCGCTTTTAA TTTTTTGGAAAAATC TERM 1398 1192297 - 1192279 - f 100 -14.6 -4.1964 | opp_overlap 1192273, overlap 1192272 TTTAAGAGTTTAAAA GCGGCCTA TGA TAGGCCGC TTTTAATTTTTTGGA THA_1165 1192410 - 1193168 + | sec-independent protein tatd TERM 1399 1193602 - 1193590 - g 70 -6.3 -4.07008 | TATTAATGAAAAAGA TAGGA AAG TCCTA GAAGCTATAGAAGCA ruvA 1193165 - 1193734 + | holliday junction DNA helicase RuvA TERM 1400 1194015 - 1193977 - f 90 -4.7 -5.72053 | gap 2, opp_overlap 1193977 GAACGAAATAAAAAA CACCCCC-GGA-AGTGATA AAA TATAACTATCTAGGGGGTG TTTTTCATTGGCAAA TERM 1401 1193977 - 1194015 + F 83 -6.9 -4.8622 | gap 2, opp_overlap 1193977 GAACGAAATAAAAAA CACCCCC-GGA-AGTGATA AAA TATAACTATCTAGGGGGTG TTTTTCATTGGCAAA TERM 1402 1194116 - 1194103 - f 71 -5.3 -4.67982 | opp_overlap 1194103 TTTCATTGAAGAAAA TCTTC CTAA GAAGA CTATTGCTTCTCTTT TERM 1403 1195117 - 1195145 + F 77 -8.1 -3.91984 | opp_overlap 1195117 GGCAAGGTTAAAAAA CATGGCTCCGGTG GAA TACCGAAACCATG TTGTTTGAAAAGTGT TERM 1404 1195145 - 1195117 - f 100 -11.8 -5.09426 | opp_overlap 1195117 GGCAAGGTTAAAAAA CATGGCTCCGGT GGAAT ACCGAAACCATG TTGTTTGAAAAGTGT TERM 1405 1195213 - 1195247 + F 90 -10.9 -3.76607 | gap 1, opp_overlap 1195212 1195211, overlap 1195204 GTCCAGAAAAAGAGG CTCTTTTCTTG-CTGC TGTT GCAGGCAAGACAAGAG TTTGGATGTATATTC THA_1168 1195253 - 1195501 + | hypothetical protein THA_1169 1195524 - 1195853 + | hypothetical protein THA_1170 1195904 - 1196545 + | hypothetical protein TERM 1406 1196871 - 1196845 - g 70 -3.9 -5.12707 | gap 2 GCAAATTTTAAAAAA TCCCACA--TTGA TTG TCAACCTGTGGGA GACTTAACAATGGTA TERM 1407 1196872 - 1196896 + G 77 -7.3 -4.25104 | TGTCAACCTGTGGGA GACTTAACAAT GGT ATTTTTAAGTC TTTTAATGAACCAAG THA_1171 1196533 - 1197063 + | hypothetical protein TERM 1408 1198086 - 1198066 - g 72 -6.3 -4.31085 | opp_overlap 1198080, overlap 1198059 1198067 GAGATTAATCCAAAA CTTGAAAAT GGA ATTTTCAAA GTGGAAGTTTTGGAG TERM 1409 1198223 - 1198242 + G 72 -4.4 -5.04385 | gap 1, opp_overlap 1198239 TTAGAGATACATATG TTGAGATCT ATA AGA-CTCAA TTTTTTGAAAATATA TERM 1410 1198839 - 1198803 - g 72 -6.7 -4.03995 | opp_overlap 1198810 1198811 1198814, overlap 1198816 TGTGGGACAAAAATA TTTTAAATTAACAGGTG ATG CACCAGTTGCTTTAAAA CTTCAAGAAGAATTT THA_1172 1197067 - 1199235 + | outer membrane protein, OMP85 family, putative TERM 1411 1199936 - 1199913 - g 70 -8.4 -3.07994 | opp_overlap 1199915, overlap 1199915 1199924 TTTAAGGCGATGGAA TATTTTAGAA AGTA TTCTAAAATA CTTAAAAATATTTCG TERM 1412 1200040 - 1200024 - g 77 -4.5 -5.33026 | opp_overlap 1200024, overlap 1200026 GAAGTGAAAGAAAAA TCTTCAA GGC TTGAAAA TTTGGCGGAAAAGCT THA_1173 1199250 - 1200350 + | alanyl-tRNA synthetase THA_1174 1200347 - 1201531 + | hypothetical protein TERM 1413 1201582 - 1201550 - f 84 -9.9 -3.45536 | opp_overlap 1201553 1201580, overlap 1201553 ATAATTAATTTAGAA CAAGCCCCCTCGT AGAGAAA AAGAGGGGGCTTA TGTTATAATATATAA TERM 1414 1201579 - 1201553 - f 83 -9.4 -3.85209 | opp_overlap 1201553, overlap 1201550 ATTAATTTAGAACAA GCCCCCTCGT AGAGAAA AAGAGGGGGC TTATGTTATAATATA TERM 1415 1201553 - 1201579 + F 83 -9.4 -3.78879 | opp_overlap 1201550 1201553 ATTAATTTAGAACAA GCCCCCTCGT AGAGAAA AAGAGGGGGC TTATGTTATAATATA TERM 1416 1202609 - 1202598 - g 74 -3 -5.36965 | GAATAGTAGAAAAAA TCTT GGAA AAGA GGTAATCAGAAGGAT THA_1175 1201636 - 1203006 + | glutamyl-tRNA(Gln) amidotransferase subunit A THA_1176 1203003 - 1204433 + | aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B TERM 1417 1204737 - 1204756 + F 86 -4.2 -5.73978 | opp_overlap 1204739 1204744, overlap 1204739 ATCTGAATTTTCCAA CATCAAGC CAAG GCTTGGAG TTTTTTGTTTCTGAT TERM 1418 1205619 - 1205591 - g 81 -4.6 -5.43866 | gap 2, opp_overlap 1205594, overlap 1205592 1205593 GAAGTTTTAAAAAAA GC-TGGGC-GAAGC CAT GATTCAGCCCAAGC GTTGAAAGCTTATAA THA_1178 1205192 - 1206310 + | putative oxygen-independent coproporphyrinogen III oxidase THA_1179 1206300 - 1207391 + | cell division protein, RodA/ftsW/spoVE family THA_1180 1207412 - 1207633 + | hypothetical protein TERM 1419 1207636 - 1207658 + F 100 -16.4 -5.41143 | opp_overlap 1207636 TCAATTAGCATGAAA GCTAGTGGCT CTG AGCCACTAGC TTTTTTTAAAGAATA TERM 1420 1207658 - 1207636 - f 100 -16.4 -3.82031 | opp_overlap 1207636 TCAATTAGCATGAAA GCTAGTGGCT CTG AGCCACTAGC TTTTTTTAAAGAATA THA_1181 1207697 - 1208620 + | methanol dehydrogenase regulatory protein THA_1182 1208621 - 1209817 + | hypothetical protein TERM 1421 1210412 - 1210426 + G 70 -5.8 -4.28049 | TATATTTTTGAGGTT GAAAAA GGA TTTTTC TTTTAAAATTTTAGC TERM 1422 1211020 - 1211074 + G 100 -10.8 -4.0825 | opp_overlap 1211028, overlap 1211028 AACTTAAGGAATTAA TTGAAAAATACACAGCCCCCTCTCAA GTT TAGAGGGGGGACTGTGTATTGTTATA TTATTTCATTGAGCA THA_1183 1209807 - 1211051 + | hypothetical protein TERM 1423 1211066 - 1211028 - T 100 -16.8 -4.77896 | opp_overlap 1211020 1211028 GAATTAATTGAAAAA TACACAGCCCCCTCTCAA GTT TAGAGGGGGGACTGTGTA TTGTTATATTATTTC TERM 1424 1211028 - 1211066 + T 100 -16.8 -4.06177 | opp_overlap 1211028, overlap 1211020 GAATTAATTGAAAAA TACACAGCCCCCTCTCAA GTT TAGAGGGGGGACTGTGTA TTGTTATATTATTTC THA_1184 1212809 - 1211070 - | oligoendopeptidase F TERM 1425 1211209 - 1211219 + g 72 -4 -5.07107 | AGTAGTTCAATATAT TTTG GAA CAAA TTTTTTACCCATTTC TERM 1426 1214203 - 1214191 - g 74 -6.3 -4.37734 | opp_overlap 1214190 1214186 TATAATAAGCGAAAA TGATG AGG CATCA GTTGCATTTTTAGAT THA_1185 1212911 - 1214566 + | ggdef domain protein truA 1214563 - 1215297 + | tRNA pseudouridine synthase A TERM 1427 1215392 - 1215370 - g 80 -8.6 -3.78067 | opp_overlap 1215369 1215382 1215383 AAGAGGCAAGCGAAA TTATTTCATC ATG GATGAAACAA CCTGTTTTAACATTA THA_1187 1215336 - 1216526 + | hypothetical protein THA_1188 1216523 - 1217305 + | hemolysin A THA_1189 1217302 - 1218699 + | hypothetical protein TERM 1428 1218818 - 1218804 - g 76 -2.8 -5.65177 | AGACTTAGAAAAAAA TCCAGA AGA TATGGA ATATATAAACGTGGC TERM 1429 1219614 - 1219602 - g 90 -4.9 -5.71295 | AGAGAAAAAGAAAAA TGTTA AAA TAACA CAAACGGTCAGAGTT THA_1190 1218712 - 1220754 + | chemotaxis protein CheA THA_1191 1220765 - 1221220 + | chemotaxis protein CheW THA_1192 1221225 - 1221587 + | putative Chemotaxis protein CheY-like protein TERM 1430 1221683 - 1221706 + G 78 -6.6 -4.65446 | opp_overlap 1221677 1221680 1221683 1221682, overlap 1221684 GGTTATAAAGAACAG GGTCCCCCGA AATG TAGGGGGACA TTTTATCTCTGTCAT TERM 1431 1221684 - 1221705 + G 81 -10.1 -3.38183 | opp_overlap 1221677 1221680 1221683 1221682, overlap 1221683 GTTATAAAGAACAGG GTCCCCCGA AATG TAGGGGGAC ATTTTATCTCTGTCA THA_1193 1221651 - 1221917 + | flagellar biosynthesis protein FliZ, putative fliP 1221914 - 1222669 + | flagellar biosynthetic protein FliP TERM 1432 1222829 - 1222806 - g 70 -5.3 -4.63044 | overlap 1222807 AGCTACACAAATAAA TGAGCAAAC TCTTAC GTTTGCTCC AAGGATTATTGTTTT TERM 1433 1222828 - 1222807 - g 74 -8.8 -3.36742 | overlap 1222806 GCTACACAAATAAAT GAGCAAAC TCTTAC GTTTGCTC CAAGGATTATTGTTT fliQ 1222672 - 1222938 + | flagellar biosynthetic protein FliQ THA_1196 1223540 - 1222935 - | tmk thymidylate kinase TERM 1434 1223303 - 1223287 - G 80 -2.2 -5.80817 | opp_overlap 1223282 1223287 1223300 GCCAAGACAAAAAAA CCTCTT TTAAG ATGAGG TTTTATAACTTCTTC TERM 1435 1223562 - 1223582 + r 79 -8.2 -3.98775 | opp_overlap 1223564, overlap 1223564 TCCCTCCTGTCAAAA AAGCCCCC TTTTC GGGGGCTA TTTGGTTACATTTCT TERM 1436 1223580 - 1223564 - R 100 -10.8 -5.00616 | opp_overlap 1223562 1223564 CCTCCTGTCAAAAAA GCCCCC TTTTC GGGGGC TATTTGGTTACATTT TERM 1437 1223564 - 1223580 + r 89 -10.8 -3.57278 | opp_overlap 1223564, overlap 1223562 CCTCCTGTCAAAAAA GCCCCC TTTTC GGGGGC TATTTGGTTACATTT rpsB 1224367 - 1223588 - | ribosomal protein S2 TERM 1438 1223678 - 1223692 + g 74 -8.6 -3.24329 | AGCTTCTTCACTACC GAAGGA TAC TCCTTC TCTTCCTTCAAGATA TERM 1439 1224177 - 1224164 - G 72 -6.7 -4.15044 | opp_overlap 1224146 CTTTGTTCCAACAAA GAGGA TTGT TCCTC CTTCAGCTGCTTTAT rplT 1224822 - 1224466 - | ribosomal protein L20 rpmI 1225055 - 1224852 - | ribosomal protein L35 infC 1225492 - 1225067 - | translation initiation factor IF-3 TERM 1440 1225625 - 1225599 - R 100 -13 -5.47159 | opp_overlap 1225597 1225601 TCCTAACATAAAAAA TATCGGCGTGCA AAA CGCCCGCCGATA CATTAATCATCTATT TERM 1441 1225601 - 1225623 + r 79 -10.5 -2.58272 | opp_overlap 1225599, overlap 1225597 CTAACATAAAAAATA TCGGCGTGC AAAAC GCCCGCCGA TACATTAATCATCTA TERM 1442 1225699 - 1225714 + r 78 -9 -3.50588 | overlap 1225698 CTTTCGCTTGGGGTG GGAAGC GGGC GCTTCC TCTTTACTATAACCT THA_1204 1227447 - 1226035 - | pyk pyruvate kinase THA_1205 1228684 - 1227398 - | hypothetical protein TERM 1443 1227596 - 1227584 - GR 82 -6.3 -5.01546 | opp_overlap 1227583 AAATGTAGATAAAAA TGCAA TAC TTGCA AATATTTCAGAAAGT TERM 1444 1228065 - 1228054 - GR 74 -3 -5.38326 | CTAATGAAATAAAAA TTTC GTAA GAAA AATATAAAGTTGGTA THA_1206 1229870 - 1228647 - | hypothetical protein TERM 1445 1228862 - 1228840 - GR 71 -7.8 -3.41878 | overlap 1228841 TGTTTTAACTTATAA TTGTCAAAAG TAT CTTTTGACAT TACAATCAGTAAATT TERM 1446 1228861 - 1228841 - GR 86 -11.3 -2.64912 | overlap 1228840 GTTTTAACTTATAAT TGTCAAAAG TAT CTTTTGACA TTACAATCAGTAAAT THA_1207 1230753 - 1229872 - | ribosomal large subunit pseudouridine synthase C TERM 1447 1230949 - 1230966 + H 72 -3.4 -5.26875 | gap 1, overlap 1230937 1230950 CTGCCGCACCCACCA G-TGGGG TTAGT CCCCATC TTTTTTAGTTGGGGC TERM 1448 1230950 - 1230964 + H 76 -7.1 -4.26777 | overlap 1230937 1230949 TGCCGCACCCACCAG TGGGG TTAGT CCCCA TCTTTTTTAGTTGGG TERM 1449 1231051 - 1231070 + H 100 -12.2 -5.60993 | overlap 1231041 CTACCGCCCCAGCCA GAGGGCTT GTAT AAGCCCTC TTTTTTTCTAAGAAC rpsL 1231235 - 1231609 + | ribosomal protein S12 rpsG 1231628 - 1232095 + | ribosomal protein S7 TERM 1450 1233172 - 1233162 - g 75 -4 -5.22943 | ACTAAAGGTAAAAAA GAAA GAA TTTC AAGGTTAATATTCAT TERM 1451 1233326 - 1233316 - g 79 -5.4 -5.26316 | TTATCTTAGAAAAAA TGGA ATT TCCA GAACCAGTTATTTCA fusA1 1232109 - 1234184 + | translation elongation factor G TERM 1452 1235215 - 1235205 - g 70 -5.4 -4.62336 | ACTCCATTCCAAAAA GGTT ACA AACC ACAATTCTTCATTAG THA_1213 1234215 - 1235417 + | tuf translation elongation factor Tu TERM 1453 1235429 - 1235451 + F 100 -16.4 -3.16564 | opp_overlap 1235424 1235433, overlap 1235433 GTAAAATAAATTTTA GAAAGGGGGA ATT TCCCCCTTTC TTCCTGAAATAAAAA TERM 1454 1235447 - 1235433 - f 100 -11.4 -3.96893 | opp_overlap 1235429 1235433, overlap 1235424 AATAAATTTTAGAAA GGGGGA ATT TCCCCC TTTCTTCCTGAAATA TERM 1455 1235433 - 1235447 + F 100 -11.4 -4.25056 | opp_overlap 1235433 1235424, overlap 1235429 AATAAATTTTAGAAA GGGGGA ATT TCCCCC TTTCTTCCTGAAATA rpsJ 1235480 - 1235788 + | ribosomal protein S10 rplC 1235811 - 1236428 + | ribosomal protein L3 rplD 1236466 - 1237131 + | ribosomal protein L4/L1 family rplW 1237131 - 1237436 + | ribosomal protein L23 rplB 1237452 - 1238276 + | ribosomal protein L2 TERM 1456 1238330 - 1238312 - g 80 -6.7 -4.72986 | opp_overlap 1238299 CAGGTCCACGAAAAA GGGACCT TATGT AGATCCC AAGTTACTAAAAAAA TERM 1457 1238358 - 1238347 - g 86 -3 -5.86965 | AGTTACTAAAAAAAA TAAG ACAA CTTA ACGAAGCAGGCGAGA rpsS 1238292 - 1238579 + | ribosomal protein S19 THA_1220 1238594 - 1239040 + | 50S ribosomal protein L22 rpsC 1239061 - 1239690 + | ribosomal protein S3 rplP 1239713 - 1240141 + | ribosomal protein L16 TERM 1458 1240323 - 1240301 - g 76 -6.4 -4.5774 | opp_overlap 1240304 TAGCAAGAATCAAAA CAATTCTC AGGGAAA GAGAATTG GGTGTAAGGAGGTAA rpmC 1240138 - 1240338 + | ribosomal protein L29 THA_1224 1240344 - 1240643 + | 30S ribosomal protein S17 rplN 1240633 - 1241001 + | ribosomal protein L14 rplX 1241015 - 1241335 + | ribosomal protein L24 THA_1227 1241349 - 1241894 + | 50S ribosomal protein L5 rpsN 1241910 - 1242095 + | ribosomal protein S14p/S29e rpsH 1242111 - 1242515 + | ribosomal protein S8 THA_1230 1242529 - 1243083 + | 50S ribosomal protein L6 rplR 1243099 - 1243467 + | ribosomal protein L18 rpsE 1243482 - 1244012 + | ribosomal protein S5 rpmD 1244016 - 1244201 + | ribosomal protein L30 rplO 1244216 - 1244659 + | ribosomal protein L15 THA_1235 1244662 - 1245948 + | preprotein translocase, SecY subunit THA_1236 1245954 - 1246598 + | adenylate kinase THA_1237 1246604 - 1247371 + | map methionine aminopeptidase, type I infA 1247388 - 1247585 + | translation initiation factor IF-1 TERM 1459 1248078 - 1248068 - g 78 -6.8 -4.61747 | GCAAGAACTAGAAAA GGTC CAA GACC AAGCAGAATCAAAAA rpsM 1247735 - 1248103 + | ribosomal protein S13p/S18e rpsK 1248116 - 1248505 + | ribosomal protein S11 TERM 1460 1248872 - 1248862 - g 71 -6.8 -3.97511 | CAGTTAATAGAACAA CTGC AAG GCAG CTAGTAAATCATGGA rpsD 1248519 - 1249148 + | ribosomal protein S4 rpoA 1249155 - 1250147 + | DNA-directed RNA polymerase, alpha subunit rplQ 1250149 - 1250532 + | ribosomal protein L17 TERM 1461 1250533 - 1250546 + F 100 -9.5 -5.27779 | opp_overlap 1250533 GTAATAGAAGAGTAA GGGGG AATA CCCCC TTTTTTACTCTTGAG TERM 1462 1250546 - 1250533 - f 80 -9.5 -3.46629 | opp_overlap 1250533 GTAATAGAAGAGTAA GGGGG AATA CCCCC TTTTTTACTCTTGAG TERM 1463 1251248 - 1251236 - g 85 -4.9 -5.64873 | GTGAAGAAGAAAAAA TAGTT TAT AACTA CAAAATAGAGATTTT THA_1244 1250572 - 1251879 + | trigger factor clpP 1251863 - 1252468 + | ATP-dependent Clp protease, proteolytic subunit ClpP THA_1246 1252517 - 1253275 + | hypothetical protein TERM 1464 1253509 - 1253526 + G 70 -8.5 -3.14672 | opp_overlap 1253509, overlap 1253508 1253505 1253525 AATTATATTCTGAAA CATACTC GGTT GAGTATG GTTATTTTCATAAGA TERM 1465 1253526 - 1253509 - g 74 -8.5 -3.60006 | opp_overlap 1253508 1253505 1253509 1253525 AATTATATTCTGAAA CATACTC GGTT GAGTATG GTTATTTTCATAAGA THA_1247 1253277 - 1253996 + | hypothetical protein TERM 1466 1254507 - 1254496 - g 78 -3 -5.52909 | overlap 1254484 CAATATTTAAAAAAA TACT TCGA AGTA ACAAGTAGAGGAACA THA_1248 1253977 - 1254789 + | chemotaxis protein methyltransferase lspA 1254799 - 1255347 + | signal peptidase II TERM 1467 1255384 - 1255360 - f 90 -5.7 -5.68438 | opp_overlap 1255359 TGATGAAATAAAAAA GCCAAGTTATA AAT TAAAGCTTGGC GATGTTGTTTTTTTG TERM 1468 1255677 - 1255663 - g 70 -3.6 -5.03314 | TGTAGTTGCAAAAAA TGATAA GGC TCATCA GAGTTTATCAAAGCA rluD 1255397 - 1256134 + | ribosomal large subunit pseudouridine synthase D TERM 1469 1256167 - 1256185 + F 95 -6 -5.74684 | opp_overlap 1256170, overlap 1256170 CTATAATTAGACTAT AAAGGCAT TAA ATGCCTTA TTTTTCTTTTTATTA TERM 1470 1256182 - 1256170 - f 77 -7.7 -4.04149 | opp_overlap 1256167 1256170 TAATTAGACTATAAA GGCAT TAA ATGCC TTATTTTTCTTTTTA TERM 1471 1256170 - 1256182 + F 87 -7.7 -4.855 | opp_overlap 1256170, overlap 1256167 TAATTAGACTATAAA GGCAT TAA ATGCC TTATTTTTCTTTTTA glnA1 1256220 - 1257539 + | glutamine synthetase, type I TERM 1472 1257571 - 1257547 - T 77 -7.9 -4.06502 | TAGTGTGAAATTAAA GAGGTCAGT TTATTGC ACTGACCCC AAGAAATGAGATAAG TERM 1473 1257621 - 1257604 - T 72 -3.3 -5.1517 | overlap 1257605 AAAAGAAATGAAAAA GCACCCC CGAA GTGGTAC AATAAAACCAACAAG TERM 1474 1258446 - 1258418 - T 100 -14.7 -5.28683 | opp_overlap 1258418 1258417 1258415 1258420 AGCAAGATTAAAAAA CATGGCTCCGAAA AAG TCTCGAAGCCATG CTGTTTGAAAAGTTA TERM 1475 1258418 - 1258446 + T 80 -10.3 -2.6162 | opp_overlap 1258418, overlap 1258417 1258415 1258420 AGCAAGATTAAAAAA CATGGCTCCGAAA AAG TCTCGAAGCCATG CTGTTTGAAAAGTTA TERM 1476 1258458 - 1258470 + T 79 -4.9 -5.28176 | opp_overlap 1258458 CATGCTGTTTGAAAA GTTAA TTA TTAAC TTTTTTATCCGTCCC TERM 1477 1258695 - 1258666 - T 82 -5 -5.4505 | opp_overlap 1258669, overlap 1258669 TTCTTGAATAAAAAA TAACCCTGCACA ATTGTA TGCGCAAGGGTA TTGGGAAATTTTTTA TERM 1478 1258692 - 1258669 - T 83 -6.7 -4.81306 | opp_overlap 1258669, overlap 1258666 TTGAATAAAAAATAA CCCTGCACA ATTGTA TGCGCAAGG GTATTGGGAAATTTT THA_1252 1258983 - 1258720 - | crispr-associated protein Cas2 THA_1253 1259979 - 1258987 - | cas crispr-associated protein Cas1 THA_1254 1260426 - 1259995 - | cas crispr-associated protein Cas4 THA_1255 1261487 - 1261612 + | hypothetical protein THA_1256 1261718 - 1261831 + | hypothetical protein TERM 1479 1262159 - 1262183 + T 76 -6.3 -4.57341 | opp_overlap 1262160 1262161, overlap 1262160 1262161 ATAGGTATGCTAAAA ACGCAATGGGC TTA GCCCGTTGCCC TTTTTAAAACAAGTT TERM 1480 1262160 - 1262182 + T 78 -9.8 -3.33922 | opp_overlap 1262160 1262161, overlap 1262159 1262161 TAGGTATGCTAAAAA CGCAATGGGC TTA GCCCGTTGCC CTTTTTAAAACAAGT TERM 1481 1262182 - 1262160 - T 82 -7.6 -4.62783 | opp_overlap 1262160 1262159 1262161, overlap 1262161 TAGGTATGCTAAAAA CGCAATGGGC TTA GCCCGTTGCC CTTTTTAAAACAAGT TERM 1482 1262161 - 1262181 + T 100 -13.3 -2.60032 | opp_overlap 1262160 1262161, overlap 1262160 1262159 AGGTATGCTAAAAAC GCAATGGGC TTA GCCCGTTGC CCTTTTTAAAACAAG TERM 1483 1262181 - 1262161 - T 85 -11.1 -3.37188 | opp_overlap 1262161 1262160 1262159, overlap 1262160 AGGTATGCTAAAAAC GCAATGGGC TTA GCCCGTTGC CCTTTTTAAAACAAG THA_1257 1265192 - 1262841 - | crispr-associated helicase Cas3 TERM 1484 1265255 - 1265232 - R 84 -5.2 -5.43553 | opp_overlap 1265235, overlap 1265236 AGTTAAAAAATAAAA GAAAGGTGCC AAAC GGCACCATTA CATTAAAACAATGTT TERM 1485 1265251 - 1265236 - R 100 -10.4 -5.1285 | opp_overlap 1265235, overlap 1265232 AAAAAATAAAAGAAA GGTGCC AAAC GGCACC ATTACATTAAAACAA THA_1258 1265963 - 1265253 - | cas5h crispr-associated protein Cas5, hmari subtype THA_1259 1266876 - 1265968 - | csh crispr-associated protein, Csh2 family TERM 1486 1266060 - 1266077 + g 71 -2.1 -5.3472 | gap 1, overlap 1266063 1266066 TAAGTTCTAGATTTT TAT-CTAC AAA GTAGTATA TTTTGTTTATTTTTT TERM 1487 1266066 - 1266082 + g 77 -4.5 -5.26158 | overlap 1266063 1266060 CTAGATTTTTATCTA CAAAGTA GTA TATTTTG TTTATTTTTTCTTTA THA_1260 1268782 - 1266869 - | crispr-associated protein, family TERM 1488 1268124 - 1268136 + g 76 -2.7 -5.63103 | overlap 1268114 CTGTTTTCTTTTTTA GAAGA TGT TTTTC TTTTTTTACTTGAAC THA_1261 1269526 - 1268804 - | cas crispr-associated protein Cas6 TERM 1489 1270008 - 1269996 - R 72 -3.4 -5.26316 | opp_overlap 1269996 GGATTGGAGAAAAAA TGAG GAAAA CTCA TTTTTTCACACTAAC TERM 1490 1270353 - 1270363 + r 70 -4 -4.94992 | GAACCATTGTCTGTT CTAA TAA TTAG TTTTTCTGAATTTAC TERM 1491 1271547 - 1271503 - R 100 -15.3 -3.28889 | opp_overlap 1271508 1271510 1271511 1271513, overlap 1271511 AGATATCAAGCAAGA TTAAAAAACATGGCTTTGGTA GAG TACCGAAGCCATGCTGTTTAA AAAGTAAATTATTAA TERM 1492 1271508 - 1271542 + r 87 -10.8 -3.5594 | opp_overlap 1271503 1271511, overlap 1271510 1271511 1271513 TCAAGCAAGATTAAA AAACATGGCTTTGGTA GAG TACCGAAGCCATGCTG TTTAAAAAGTAAATT TERM 1493 1271510 - 1271540 + r 100 -13.4 -3.35597 | opp_overlap 1271503 1271511, overlap 1271508 1271511 1271513 AAGCAAGATTAAAAA ACATGGCTTTGGTA GAG TACCGAAGCCATGC TGTTTAAAAAGTAAA TERM 1494 1271511 - 1271539 + r 100 -16.9 -2.61144 | opp_overlap 1271511 1271503, overlap 1271510 1271508 1271513 AGCAAGATTAAAAAA CATGGCTTTGGTA GAG TACCGAAGCCATG CTGTTTAAAAAGTAA TERM 1495 1271539 - 1271511 - R 100 -14.7 -5.28683 | opp_overlap 1271510 1271508 1271511 1271513, overlap 1271503 AGCAAGATTAAAAAA CATGGCTTTGGTA GAG TACCGAAGCCATG CTGTTTAAAAAGTAA TERM 1496 1271513 - 1271537 + r 100 -13.7 -2.84504 | opp_overlap 1271511 1271503, overlap 1271511 1271510 1271508 CAAGATTAAAAAACA TGGCTTTGGTA GAG TACCGAAGCCA TGCTGTTTAAAAAGT THA_1262 1272510 - 1271599 - | putative cysteinyl-tRNA synthetase THA_1263 1274779 - 1272515 - | hypothetical protein TERM 1497 1274225 - 1274236 + g 74 -3 -5.42265 | opp_overlap 1274225, overlap 1274216 GTTATTTGAAAGAAA TATC ATCG GATA TTTTTTATCATTTAC TERM 1498 1274481 - 1274471 - G 72 -4 -5.01732 | AATGTTGTTAAAAAA GAAA AAA TTTC CACCATTTTCTATAA THA_1264 1276081 - 1274810 - | HNH endonuclease domain protein TERM 1499 1276319 - 1276298 - R 77 -10.1 -2.57463 | opp_overlap 1276297 1276294, overlap 1276285 1276297 AAGGCTTTTTACAAG CCTCCGCTT CTAT AAGCGGTGG GTAGTTGACTTAACC THA_1265 1277691 - 1276291 - | hypothetical protein THA_1266 1279098 - 1277692 - | glycosyltransferase I TERM 1500 1279268 - 1279278 + H 74 -4 -5.23396 | TTTTCTTTCTTTTAA TATC GAA GATA TTTTTATTAATTCTT THA_1267 1279698 - 1280519 + | integrase, catalytic region THA_1268 1281615 - 1280725 - | hypothetical protein TERM 1501 1280917 - 1280933 + g 81 -8.1 -4.28994 | AATTTTTTCATGTTC TTCTAGA TCT TCTAGAA TTTTAATAAGTAATG TERM 1502 1281003 - 1281023 + g 100 -7.7 -5.80727 | CTTCTAGAAATTTTT TTGAGTTGT TTA ACAATTCAA TTTTTTGTTCTTTTT TERM 1503 1281248 - 1281277 + g 72 -2.9 -5.43866 | ATTTCCTCTTTTGAT GTAAGCTCTAAAA TTAA TTTTATGGCTTCC TTTTTTTGCACCTTA THA_1269 1282814 - 1281612 - | hypothetical protein TERM 1504 1282445 - 1282459 + g 80 -2.2 -5.70522 | ATGTTTCAATTTTTT TAGAAA GTA TTTTTA TTTTTTCTTCTTGTT THA_1270 1282982 - 1282857 - | hypothetical protein THA_1271 1283069 - 1283197 + | hypothetical protein TERM 1505 1283341 - 1283358 + G 79 -9.1 -3.53945 | opp_overlap 1283334, overlap 1283340 ATACATTAGCTCTTG GGGCCAT ATAT GTGGCCC TCTTGTTCTATGCTA TERM 1506 1283458 - 1283468 + G 76 -5.4 -5.03314 | AATTTATTCCTGTAA GGTT TCA AACC TTTTTTGAAAATAAA THA_1272 1283274 - 1284581 + | ggdef domain/hd domain protein THA_1273 1284578 - 1285057 + | hypothetical protein TERM 1507 1285123 - 1285067 - f 80 -10.7 -2.70451 | gap 1, opp_overlap 1285081 1285086, overlap 1285066 1285079 1285080 1285081 1285086 AAATAATGTAAATAT TCAT-TTTAAAAAGGTAAAAGAGGGT AATAAA ACCCTCTTTTATTTTTTTAAATATGA TAAAATTAAATAGAA TERM 1508 1285109 - 1285080 - f 71 -8 -3.37188 | opp_overlap 1285081 1285086, overlap 1285079 1285067 1285066 1285081 1285086 ATTCATTTTAAAAAG GTAAAAGAGGGT AATAAA ACCCTCTTTTAT TTTTTTAAATATGAT TERM 1509 1285108 - 1285081 - f 86 -11.5 -2.61831 | opp_overlap 1285081 1285086, overlap 1285080 1285079 1285067 1285066 1285086 TTCATTTTAAAAAGG TAAAAGAGGGT AATAAA ACCCTCTTTTA TTTTTTTAAATATGA TERM 1510 1285081 - 1285108 + F 100 -11.5 -5.50499 | opp_overlap 1285081 1285080 1285079 1285067 1285066 1285086, overlap 1285086 TTCATTTTAAAAAGG TAAAAGAGGGT AATAAA ACCCTCTTTTA TTTTTTTAAATATGA TERM 1511 1285103 - 1285086 - f 78 -7 -4.4874 | opp_overlap 1285081 1285086, overlap 1285081 1285080 1285079 1285067 1285066 TTTAAAAAGGTAAAA GAGGGT AATAAA ACCCTC TTTTATTTTTTTAAA TERM 1512 1285086 - 1285103 + F 100 -7 -5.55855 | opp_overlap 1285086 1285081 1285080 1285079 1285067 1285066, overlap 1285081 TTTAAAAAGGTAAAA GAGGGT AATAAA ACCCTC TTTTATTTTTTTAAA THA_1274 1285153 - 1285803 + | glycoprotease family mutS 1285805 - 1288258 + | DNA mismatch repair protein MutS THA_1276 1288245 - 1288514 + | hypothetical protein TERM 1513 1288945 - 1288955 + G 70 -5.4 -4.57569 | opp_overlap 1288945 TATTATTTTAGAAAG TGCT CAT AGCA TTTTTGGGCCGATGG THA_1277 1288505 - 1289257 + | hypothetical protein THA_1278 1289591 - 1290412 + | integrase, catalytic region THA_1279 1290456 - 1291157 + | HD domain protein THA_1280 1291675 - 1291154 - | extradiol ring-cleavage dioxygenase, class III enzyme, subunit B THA_1281 1292833 - 1291691 - | RmuC domain protein THA_1282 1293570 - 1292845 - | phospholipase/Carboxylesterase THA_1283 1294253 - 1293723 - | hypothetical protein TERM 1514 1294135 - 1294158 + g 72 -4.7 -4.9181 | gap 1 ATTAAACGTTCTTCA TCTTCCTTGA TTTTC TCA-GGAAGA TTTTTGCTGTTATGT THA_1284 1294825 - 1294253 - | hypothetical protein THA_1285 1295711 - 1294842 - | ATPase, PP-loop superfamily THA_1286 1296934 - 1295726 - | hypothetical protein TERM 1515 1296401 - 1296430 + g 89 -4.4 -5.9362 | opp_overlap 1296408 TTTGTCCGGATTTTC TACATAATCGAT AATTTC ATCGATTGAGTA TTTTTTTATGTTTTC THA_1287 1297010 - 1298599 + | OB-fold nucleic acid binding domain protein TERM 1516 1298606 - 1298627 + T 100 -12.3 -5.22794 | opp_overlap 1298609 TCTCACTAATTTTAA CTAGCGCCT AAGG GGGCGCTAG TTTTTTAATCGTTGT THA_1288 1300170 - 1298632 - | carbohydrate kinase, fggy TERM 1517 1299065 - 1299053 - G 71 -7.7 -3.40403 | opp_overlap 1299053 CCTTTTGTATGATAA TCGGA AAA TCCGA TTATAGCTCCCCTTG TERM 1518 1299599 - 1299609 + g 71 -6.8 -3.9712 | TTTTTGTTTTTTGGC CACC TTT GGTG TTTATAATCAAATGG TERM 1519 1300297 - 1300264 - R 100 -14.1 -3.40743 | opp_overlap 1300269, overlap 1300269 AAAAAGTTTAAGGAA GAAAATAAGCCATGG ATGT CCATGGCTTATTTTT AAAGGATTGGATTTT TERM 1520 1300292 - 1300269 - R 100 -14 -4.78572 | opp_overlap 1300269, overlap 1300264 GTTTAAGGAAGAAAA TAAGCCATGG ATGT CCATGGCTTA TTTTTAAAGGATTGG TERM 1521 1300269 - 1300292 + r 100 -14 -4.59853 | opp_overlap 1300269 1300264 GTTTAAGGAAGAAAA TAAGCCATGG ATGT CCATGGCTTA TTTTTAAAGGATTGG THA_1289 1301408 - 1300296 - | lysine 2,3-aminomutase YodO family protein TERM 1522 1300682 - 1300699 + g 81 -8.5 -4.05788 | opp_overlap 1300684 TCCAGTCTGCGTTAA CACCTTT TATC AAAGGTG TTTGATTTGCAAGAA TERM 1523 1301662 - 1301626 - R 100 -11 -5.31072 | opp_overlap 1301631, overlap 1301628 1301631 ATAATATAATAAAAA TATAATCCCCTTCCTT ATTTA AAGGAAGGGGATTTTT CTAAAGCTTGCATAT TERM 1524 1301660 - 1301628 - R 100 -13.6 -4.26142 | opp_overlap 1301631, overlap 1301626 1301631 AATATAATAAAAATA TAATCCCCTTCCTT ATTTA AAGGAAGGGGATTT TTCTAAAGCTTGCAT TERM 1525 1301631 - 1301657 + r 100 -15.3 -4.8543 | opp_overlap 1301628 1301626 1301631 ATAATAAAAATATAA TCCCCTTCCTT ATTTA AAGGAAGGGGA TTTTTCTAAAGCTTG TERM 1526 1301657 - 1301631 - R 100 -15.3 -4.20092 | opp_overlap 1301631, overlap 1301628 1301626 ATAATAAAAATATAA TCCCCTTCCTT ATTTA AAGGAAGGGGA TTTTTCTAAAGCTTG THA_1290 1304656 - 1301663 - | alpha-mannosidase TERM 1527 1301758 - 1301776 + gr 87 -5.4 -5.61824 | CTTTAACTTCCTCTA GTATATTT GAA AAATATGC TTTTTTTAAGTTTTC TERM 1528 1303953 - 1303933 - GR 70 -4 -4.98255 | overlap 1303935 GTCCAACTACAAAAA CTTTTCCA TACTT TGGAAATG GAATATTTTTAACCT TERM 1529 1304159 - 1304141 - GR 74 -8.9 -3.11024 | opp_overlap 1304140, overlap 1304140 TCTTGGAACATAAAT CGATGAG AGAAA CTCATCG GTAATATTAATTAAA THA_1291 1305680 - 1304628 - | putative transcription regulator THA_1292 1306633 - 1305695 - | unknwon conserved protein THA_1293 1307466 - 1306648 - | sugar ABC transporter permease TERM 1530 1307211 - 1307195 - G 70 -5.1 -4.58395 | TTTATTTTTGAAAAA CCATATG CAA CAAATGG AGCAGATAAAATAAC THA_1294 1308360 - 1307479 - | inner membrane protein THA_1295 1311068 - 1308417 - | endo-beta-N-acetylglucosaminidase TERM 1531 1309989 - 1310003 + g 70 -5.8 -4.22883 | ATCCTTATTCCATTC GATTTT GAA AAAATC TTCTTTTGAGTGGTA TERM 1532 1310333 - 1310355 + g 72 -4.2 -5.05228 | overlap 1310335 1310342 1310345 CGGAAATATACTTAT CATTGTTTTT TAG AAAGACAACG TTTTTCTCGTTTAAT THA_1296 1312336 - 1311068 - | sugar ABC transporter substrate-binding protein TERM 1533 1311874 - 1311886 + g 76 -2.7 -5.55769 | GCTTTGAATAGCCTG CTTTT TCT AAGAG TTTTTTATTATAAAG TERM 1534 1312416 - 1312462 + H 84 -5.5 -5.42605 | gap 1, opp_overlap 1312407 1312404 1312423 1312453, overlap 1312407 1312419 AAGTCATTGAGGTTC AATTAGATTTGTTTATACCTGT ATAT ACAGGTATAAACAAATA-GATC TTTTCTTTTTGTTAG TERM 1535 1312419 - 1312460 + H 100 -11.9 -4.3115 | opp_overlap 1312404 1312423 1312453, overlap 1312416 TCATTGAGGTTCAAT TAGATTTGTTTATACCTGT ATAT ACAGGTATAAACAAATAGA TCTTTTCTTTTTGTT TERM 1536 1312456 - 1312423 - H 100 -17.1 -2.90723 | opp_overlap 1312419 1312416, overlap 1312453 TGAGGTTCAATTAGA TTTGTTTATACCTGT ATAT ACAGGTATAAACAAA TAGATCTTTTCTTTT TERM 1537 1312578 - 1312560 - H 73 -9 -2.91888 | overlap 1312562 AAATGTTTTAAAGTA TATTATGC AAC GCATAATA AGGAGGTGTTATTTT TERM 1538 1312982 - 1313012 + G 73 -9.3 -2.55085 | overlap 1312981 1312980 1312984 GATATTAATCCTACC TATCTTTTAAAGT ATAAA ACTTTAAAGGATA AATTTATTTCAGATG THA_1297 1312592 - 1315186 + | mmpl family THA_1298 1315183 - 1315941 + | probable outer membrane protein, putative THA_1299 1315955 - 1317187 + | hypothetical protein TERM 1539 1317192 - 1317211 + F 100 -13.6 -4.57569 | opp_overlap 1317190 1317189 TTAGTTATTAAACTT TCTGGGGG TTCT CCCCCAGA TTTTTGGGGGAATAC TERM 1540 1317347 - 1317375 + G 100 -8.9 -5.40072 | opp_overlap 1317338 1317350, overlap 1317349 TGTAAAGGTTATTGA TAACCTGGGTAAT GAT ATTACCCAGGAAA TTTTTTTGAAGGCAA TERM 1541 1317349 - 1317373 + G 87 -11.5 -2.89655 | opp_overlap 1317338 1317350, overlap 1317347 TAAAGGTTATTGATA ACCTGGGTAAT GAT ATTACCCAGGA AATTTTTTTGAAGGC TERM 1542 1317372 - 1317350 - g 100 -15 -3.37071 | opp_overlap 1317349 1317347, overlap 1317338 AAAGGTTATTGATAA CCTGGGTAAT GAT ATTACCCAGG AAATTTTTTTGAAGG TERM 1543 1317524 - 1317496 - g 74 -8.3 -3.6608 | opp_overlap 1317496 1317498 ATGATTTTATTGAAA TACTTCTTGATCT TGT AAATCAAGGAGTA TTACCTGCAGATATT TERM 1544 1317496 - 1317524 + G 70 -8.3 -3.06679 | opp_overlap 1317496, overlap 1317498 ATGATTTTATTGAAA TACTTCTTGATCT TGT AAATCAAGGAGTA TTACCTGCAGATATT THA_1300 1317228 - 1317713 + | transcriptional regulator of phasin expression THA_1301 1317883 - 1318107 + | hypothetical protein THA_1302 1318107 - 1318343 + | hypothetical protein TERM 1545 1318377 - 1318356 - T 100 -14.5 -4.15453 | opp_overlap 1318356 TAATTTACGTTAAAA GAGGGTTGG AAAT CCAACCCTC TTTTACTTAAGATAG TERM 1546 1318356 - 1318377 + T 100 -14.5 -4.42238 | opp_overlap 1318356 TAATTTACGTTAAAA GAGGGTTGG AAAT CCAACCCTC TTTTACTTAAGATAG THA_1303 1319249 - 1318758 - | chromate transport protein TERM 1547 1319310 - 1319284 - R 100 -12.5 -4.93547 | opp_overlap 1319284 1319288, overlap 1319288 TTAATTAAGTAAAAA GAAATTCTCTC CGCTT GAGAGAATTTC TTGATGAAAGTATTT TERM 1548 1319284 - 1319310 + r 90 -12.5 -3.16935 | opp_overlap 1319284 1319288, overlap 1319288 TTAATTAAGTAAAAA GAAATTCTCTC CGCTT GAGAGAATTTC TTGATGAAAGTATTT TERM 1549 1319306 - 1319288 - R 89 -7.5 -4.96773 | opp_overlap 1319284 1319288, overlap 1319284 TTAAGTAAAAAGAAA TTCTCTC CGCTT GAGAGAA TTTCTTGATGAAAGT TERM 1550 1319288 - 1319306 + r 80 -7.5 -4.2461 | opp_overlap 1319288 1319284, overlap 1319284 TTAAGTAAAAAGAAA TTCTCTC CGCTT GAGAGAA TTTCTTGATGAAAGT topA 1321429 - 1319327 - | DNA topoisomerase I TERM 1551 1320478 - 1320488 + g 88 -4 -5.72616 | AGCCGCCAATATATT CTTT ACC AAAG TTTTTTTCTATAAAT TERM 1552 1321393 - 1321411 + g 71 -2.4 -5.33985 | TTTTAGCTTTTGCTG GTGATTCT ACT ATGATCAC TTTCTTTTTTTTGGA THA_1305 1322444 - 1321431 - | metal dependent phosphohydrolase THA_1306 1323535 - 1322441 - | alr alanine racemase TERM 1553 1323866 - 1323844 - R 100 -7.7 -6.02914 | opp_overlap 1323844 1323848, overlap 1323848 CCTATACAAAAAAAA CAAAGCGGG TCCCC CCCGCTTCA TTATGCTTCAACTGA TERM 1554 1323848 - 1323862 + r 76 -8.5 -3.5002 | opp_overlap 1323848 1323844, overlap 1323844 TACAAAAAAAACAAA GCGGG TCCCC CCCGC TTCATTATGCTTCAA TERM 1555 1323862 - 1323848 - R 100 -8.5 -5.39407 | opp_overlap 1323844 1323848, overlap 1323844 TACAAAAAAAACAAA GCGGG TCCCC CCCGC TTCATTATGCTTCAA rpmB 1324076 - 1323867 - | ribosomal protein L28 THA_1308 1326760 - 1324196 - | efflux ABC transporter, permease protein TERM 1556 1326778 - 1326804 + r 77 -8 -3.85704 | opp_overlap 1326780, overlap 1326779 CGTATCACCCTAATA AATTACCGCACA ATA TGTGCGGTAAAA TTTCATGATTCATCA TERM 1557 1326779 - 1326803 + r 86 -11.5 -2.90941 | opp_overlap 1326780, overlap 1326778 GTATCACCCTAATAA ATTACCGCACA ATA TGTGCGGTAAA ATTTCATGATTCATC TERM 1558 1326802 - 1326780 - R 100 -15 -4.18934 | opp_overlap 1326779 1326778 TATCACCCTAATAAA TTACCGCACA ATA TGTGCGGTAA AATTTCATGATTCAT THA_1309 1327922 - 1326807 - | RNA polymerase sigma factor RpoD TERM 1559 1327696 - 1327665 - G 76 -6.8 -4.39426 | gap 1, opp_overlap 1327665 CATATTGTCATAAAA CTTTGG-AGATTCCT CTA AAAAATCTTCCAAAG TTACATCTTCAATTC THA_1310 1329303 - 1327930 - | DNA primase TERM 1560 1329270 - 1329285 + g 78 -3.2 -5.58074 | ATTCAATTTTAACTC CTGCCT CGTT AGCCAG TTTTTTTAATGCTTC TERM 1561 1329589 - 1329566 - R 100 -15.4 -3.8901 | TTTTAAACGAGGAAA CGTGGCAGTA TTTT TACTGCCACG GAGAAGTTATATAGC rpsI 1330015 - 1329617 - | ribosomal protein S9 rplM 1330484 - 1330035 - | ribosomal protein L13 TERM 1562 1330115 - 1330141 + g 75 -7.4 -4.17048 | overlap 1330115 GTCTTTTTAATGCTT TTCTTCCAAGAA TTG TTTTTGGAAGCA TTCTTTTAACAGCAA THA_1313 1331034 - 1330501 - | riboflavin transporter rpmA 1331312 - 1331046 - | ribosomal protein L27 THA_1315 1331613 - 1331302 - | hypothetical protein rplU 1331930 - 1331610 - | ribosomal protein L21 TERM 1563 1334117 - 1334133 + G 70 -8.7 -2.70446 | opp_overlap 1334117, overlap 1334116 1334115 GTTGCAGGAACATTA GGTGCTG GTA TAGCACC GGTTTTTATAACATT TERM 1564 1334490 - 1334502 + G 74 -6.3 -4.38712 | opp_overlap 1334490 CTAATGATAAATTTA CCAAT ACT ATTGG TTTTGTAGGAATGGG THA_1317 1333721 - 1334821 + | transporter, major facilitator family ruvC 1334841 - 1335314 + | crossover junction endodeoxyribonuclease RuvC TERM 1565 1335429 - 1335415 - g 73 -5.8 -4.64766 | opp_overlap 1335427, overlap 1335427 GTGAGATTGTAAAAA TTGTAT ATG ATACAA AATCTCAATCGCTTA TERM 1566 1336576 - 1336592 + G 79 -8.1 -3.87075 | GTATAGAAGAAGTTG TTCCAAA ATT TTTGGAA TTTATAGAAGGTACT TERM 1567 1337578 - 1337552 - g 73 -3.6 -5.27335 | overlap 1337553 GCCGGTAAAGAAAAA GCTCCATCCACC AAT AATTGATGGTGC AGAAGAGAATGTTAG TERM 1568 1338967 - 1338986 + G 71 -7.2 -3.84808 | gap 1 TTAAAGTTCATTTTC CGCTTGCAT ATT ATGCA-GCG TTCTTCTCCATTAAG polC 1335327 - 1339424 + | DNA polymerase III, alpha subunit, Gram-positive type TERM 1569 1339685 - 1339671 - g 76 -6.4 -4.63179 | opp_overlap 1339684 AAACAAGAATGAAAA GCTTGA GAT CCAAGC TATAGGTGCTGGAGC THA_1320 1339588 - 1339860 + | stage V sporulation protein S THA_1321 1339868 - 1340098 + | hypothetical protein TERM 1570 1340088 - 1340107 + F 100 -6.4 -5.95539 | AAATACTGGAGATTC TCGGGG AGTAATAA CCCCGA TTTTTTTGTTTACAG TERM 1571 1340285 - 1340296 + G 82 -4.4 -5.62045 | TACCATTTGTAAGGG GACT TTTT AGTC TTTTTTATTCTATGT THA_1322 1340134 - 1340994 + | modification methylase, HemK family TERM 1572 1341492 - 1341470 - g 73 -8.5 -3.40299 | GCAGGATAGTTAGAA CACTCTCTC TTGGT GAGAGAATG AAGGCAGAAATATTT THA_1323 1341121 - 1341993 + | ATPase component THA_1324 1343577 - 1342189 - | HD domain protein TERM 1573 1342250 - 1342268 + g 76 -5.2 -5.12785 | ATGTCAACAAGATTT GGGTCGAA TTT TTTGCCCC TTTCTTTTTTAATTA lysA 1344767 - 1343613 - | diaminopimelate decarboxylase THA_1326 1345858 - 1344764 - | hydrolase, ama/HipO/hyuC family TERM 1574 1345676 - 1345691 + g 76 -7.6 -3.95852 | opp_overlap 1345675, overlap 1345675 TGATCTATAGAGTAT GAAAGG TTCA CCTTTC TTTGGTTCATACAAT pheS 1345953 - 1346930 + | phenylalanyl-tRNA synthetase, alpha subunit THA_1328 1346930 - 1347850 + | tRNA pseudouridine synthase B TERM 1575 1348427 - 1348452 + G 85 -7.7 -4.81814 | opp_overlap 1348427 TAAGACCGATAATAA TTGCTCTTAAT CTAG ATGAAGAGCAA TTTTCTTCTAATAGT TERM 1576 1348452 - 1348427 - g 74 -7.7 -3.84639 | opp_overlap 1348427 TAAGACCGATAATAA TTGCTCTTAAT CTAG ATGAAGAGCAA TTTTCTTCTAATAGT TERM 1577 1348645 - 1348657 + G 77 -7.7 -4.17987 | TCAAAGGTTGTATAT GACCA ACT TGGTC TTATTTCATTCTTTA THA_1329 1347847 - 1348914 + | GTP-binding protein YchF THA_1330 1348925 - 1349161 + | hypothetical protein THA_1331 1349215 - 1350345 + | Fe-S oxidoreductase family protein THA_1332 1350320 - 1351114 + | nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase THA_1333 1351111 - 1351851 + | GufA protein THA_1334 1351863 - 1352945 + | lipopolysaccharide biosynthesis protein BplA THA_1335 1352935 - 1353612 + | HAD superfamily (subfamily IA) hydrolase TERM 1578 1353628 - 1353657 + T 93 -9.3 -4.77759 | opp_overlap 1353619 1353631, overlap 1353629 1353631 1353634 AGAGTAGTTTTATTA AAACAAGGAGCCT TGTA AGGCTCCTTGTAA TTTTTAGTAGATTAT TERM 1579 1353629 - 1353656 + T 100 -12.8 -3.45571 | opp_overlap 1353619 1353631, overlap 1353628 1353631 1353634 GAGTAGTTTTATTAA AACAAGGAGCCT TGTA AGGCTCCTTGTA ATTTTTAGTAGATTA TERM 1580 1353654 - 1353631 - T 100 -15.4 -4.26076 | opp_overlap 1353629 1353628 1353631 1353634 GTAGTTTTATTAAAA CAAGGAGCCT TGTA AGGCTCCTTG TAATTTTTAGTAGAT TERM 1581 1353631 - 1353654 + T 100 -15.4 -3.28873 | opp_overlap 1353631, overlap 1353629 1353628 1353634 GTAGTTTTATTAAAA CAAGGAGCCT TGTA AGGCTCCTTG TAATTTTTAGTAGAT TERM 1582 1353634 - 1353651 + T 95 -11.3 -3.77111 | opp_overlap 1353631, overlap 1353631 1353629 1353628 GTTTTATTAAAACAA GGAGCCT TGTA AGGCTCC TTGTAATTTTTAGTA THA_1336 1355285 - 1353669 - | lipoprotein, putative THA_1337 1356775 - 1355432 - | HD domain protein TERM 1583 1355577 - 1355560 - G 77 -8.5 -3.85817 | ATGCTTTTCTATAAA CTCTATC AGTT GATAGAG CATCGTATACATCTA THA_1338 1357610 - 1356768 - | sensory box sensor histidine kinase THA_1339 1357609 - 1357779 + | hypothetical protein TERM 1584 1357883 - 1357897 + Tr 71 -2.9 -5.26918 | GATATTTAATACCAC TTGAA TAAAC TTCAA TTTTTTGTGAGATGT THA_1340 1359309 - 1357999 - | bacterial extracellular solute-binding protein, family 3 THA_1341 1360869 - 1359463 - | sucrose-phosphate synthase TERM 1585 1360453 - 1360463 + g 71 -3.2 -5.24129 | CCCCGTAAATGAAAA TGGA ATG TCCG TTTTTTCTAAAAACA TERM 1586 1360526 - 1360536 + g 72 -5.4 -4.72201 | GTTGTGACAAAATCT GGAA AAC TTCC TTCTTTTTTGTAGAG THA_1342 1361777 - 1360875 - | fructokinase TERM 1587 1361029 - 1361042 + g 74 -2.4 -5.54192 | CCATCACCAGCACCA GTTG CATCAA CAAC TTTTTTTGCATTACT TERM 1588 1361859 - 1361882 + r 90 -9.6 -4.26634 | opp_overlap 1361859, overlap 1361851 TAGGTGTATAAAAAA TCAGCAGCCT AAAA AGACTGCTGA TTTTAAAATTATTTT TERM 1589 1361882 - 1361859 - R 100 -11.8 -5.252 | opp_overlap 1361859 1361851 TAGGTGTATAAAAAA TCAGCAGCCT AAAA AGACTGCTGA TTTTAAAATTATTTT THA_1343 1363044 - 1361905 - | amidohydrolase family protein TERM 1590 1363093 - 1363133 + r 100 -12.7 -3.89957 | opp_overlap 1363081 1363099, overlap 1363097 1363099 1363102 ATAGTTCGCATTTCA AACAAATAACCCCCCTCAA TTT TTGAGGGGGGTTATCTCTA TTATTGGTTATTAAG TERM 1591 1363097 - 1363129 + r 100 -17.9 -3.31932 | opp_overlap 1363099, overlap 1363093 1363099 1363102 TTCGCATTTCAAACA AATAACCCCCCTCAA TTT TTGAGGGGGGTTATC TCTATTATTGGTTAT TERM 1592 1363099 - 1363127 + r 100 -20.5 -3.21182 | opp_overlap 1363099, overlap 1363097 1363093 1363102 CGCATTTCAAACAAA TAACCCCCCTCAA TTT TTGAGGGGGGTTA TCTCTATTATTGGTT TERM 1593 1363127 - 1363099 - R 100 -20.5 -4.44046 | opp_overlap 1363099 1363097 1363093 1363102 CGCATTTCAAACAAA TAACCCCCCTCAA TTT TTGAGGGGGGTTA TCTCTATTATTGGTT TERM 1594 1363102 - 1363124 + r 100 -17.8 -3.72756 | opp_overlap 1363099, overlap 1363099 1363097 1363093 ATTTCAAACAAATAA CCCCCCTCAA TTT TTGAGGGGGG TTATCTCTATTATTG TERM 1595 1363138 - 1363151 + r 85 -3.1 -6.01725 | GGTTATCTCTATTAT TGGTT ATTA AGCCA TTTTTTCTTTTTCTT THA_1344 1368093 - 1363144 - | DNA-directed RNA polymerase beta' chain TERM 1596 1365355 - 1365337 - G 73 -6 -4.65446 | overlap 1365339 AGGAGAGATATAAAA GTCTGTAA TAC TTACAGTC AATCCTGAGATCGTA TERM 1597 1365725 - 1365762 + g 79 -9.4 -3.4619 | gap 1, overlap 1365724 CCTGCAACTATATCT TTACCTG-GCATGGAAA TTGGC TTTCCATGTGCAGGTGA TATTATATTGTACCT TERM 1598 1367314 - 1367332 + g 70 -8.2 -3.11088 | TTCATCTATTTCAAC TGTTCCAT CGA ATGGAGCA TATATTGGATCAATT rpoB 1371634 - 1368116 - | DNA-directed RNA polymerase, beta subunit TERM 1599 1369237 - 1369266 + g 82 -6.6 -4.85782 | CTCTTGCTGTTGTTT CATACACTTC TATATGAACT GAAGTGTATG TTTCTTTTTCAAGAA TERM 1600 1369656 - 1369672 + g 74 -7.3 -3.97022 | TCCCATTCCATTCCT GTTCCAA CCC TTGGAGC TTCTGTTTCTATTAG TERM 1601 1369885 - 1369911 + g 72 -8.8 -2.94725 | overlap 1369884 GGATAATATTTCCTT CTTCATCAACGG GAG TTGTTGATGGAG CTATTTTGTAATTTT TERM 1602 1371156 - 1371168 + g 72 -4.1 -5.12971 | GCGACATAAATCGGA CGAGT TCC ACTTG TTTTTCTTGGCTCTT TERM 1603 1371436 - 1371446 + g 78 -6.8 -4.61873 | opp_overlap 1371436, overlap 1371437 CAGAAACAAACTCAA GGGA AAA TCCC TTTTCCTTTCTCAAA TERM 1604 1371703 - 1371728 + r 89 -11.9 -3.15427 | opp_overlap 1371703 TAAAACACAAAAAAA CCCCATACACA ACAC TGTGTACGGGG TTGATACAAAATCTT TERM 1605 1371728 - 1371703 - R 100 -14.1 -5.9362 | opp_overlap 1371703 TAAAACACAAAAAAA CCCCATACACA ACAC TGTGTACGGGG TTGATACAAAATCTT rplL 1372155 - 1371769 - | ribosomal protein L7/L12 THA_1347 1372722 - 1372180 - | chain A, Ribosomal Protein L10-L12 TERM 1606 1372565 - 1372581 + g 70 -3.7 -5.01546 | TTTATTACTTTGTAT CTTGC ACCATCA GCAAG TTTTTCTCTAAGTTT TERM 1607 1372765 - 1372750 - R 100 -10.4 -5.27709 | CTACAAAAAAATAAA CCTCGG AACT CCGAGG CAACAACAAATGGGA TERM 1608 1372795 - 1372776 - R 74 -6.5 -4.46854 | opp_overlap 1372776 CGAGGCAACAACAAA TGGGAAA ATAATA TTTCCCA TTCTGCCTCGGGCAG THA_1348 1373671 - 1372961 - | hypothetical protein THA_1349 1375052 - 1373691 - | galactosyltransferase-related protein TERM 1609 1374891 - 1374909 + g 74 -2.4 -5.55664 | overlap 1374884 1374896 AGCTTTTTCAAAGTG TTTTGTTG ATT CATCAAGA TTTTTTTCATAATAA TERM 1610 1375234 - 1375208 - R 100 -15.3 -5.41746 | opp_overlap 1375192 1375208 AATGTCCTAAAAAAA CTTAAGTGGGC GGTAG GCCCACTTAAG TTTGTAAAAGATATA TERM 1611 1375208 - 1375234 + r 100 -15.3 -3.87373 | opp_overlap 1375208, overlap 1375192 AATGTCCTAAAAAAA CTTAAGTGGGC GGTAG GCCCACTTAAG TTTGTAAAAGATATA THA_1350 1376418 - 1375255 - | flagellin TERM 1612 1375588 - 1375575 - G 72 -8.1 -3.36273 | opp_overlap 1375574 TTGTTGTAATACCAA GAGCG CCAG CGCTC ATATCATCAATTCCT TERM 1613 1376172 - 1376142 - G 70 -6.2 -4.03978 | opp_overlap 1376142 AAGCTTGTACAGAAA GTTCTCTCATTCTT TGT AAAATTGAGTGAAC TTCAGTTAAAGCACC THA_1351 1379090 - 1376499 - | glycosyl transferase, group 2 family protein TERM 1614 1378697 - 1378717 + g 81 -4.7 -5.44119 | overlap 1378698 CATTTCTAAAAAGTC TTGGGGTAG AGG CTACTTCAG TTTTTTTCAAGTCCC coaD2 1379571 - 1379095 - | pantetheine-phosphate adenylyltransferase dnaB2 1380914 - 1379577 - | replicative DNA helicase TERM 1615 1380956 - 1380985 + r 88 -9.3 -4.16016 | opp_overlap 1380959, overlap 1380958 1380959 TTATACCATAAAAAT AAAGCCCCAGATT TTTC AATCTGGGGCCTA TTTCTTGGAAAATGG TERM 1616 1380958 - 1380983 + r 95 -11.9 -3.67877 | opp_overlap 1380959, overlap 1380956 1380959 ATACCATAAAAATAA AGCCCCAGATT TTTC AATCTGGGGCC TATTTCTTGGAAAAT TERM 1617 1380982 - 1380959 - R 100 -15.4 -4.98911 | opp_overlap 1380958 1380956 1380959 TACCATAAAAATAAA GCCCCAGATT TTTC AATCTGGGGC CTATTTCTTGGAAAA TERM 1618 1380959 - 1380982 + r 100 -15.4 -2.80244 | opp_overlap 1380959, overlap 1380958 1380956 TACCATAAAAATAAA GCCCCAGATT TTTC AATCTGGGGC CTATTTCTTGGAAAA THA_1354 1382432 - 1381233 - | hypothetical protein TERM 1619 1382285 - 1382270 - G 81 -6.2 -5.0925 | opp_overlap 1382270 GCTTAAAATTAAAAA GTTTTG TAGA CAAAAC TCCCTTTTTAATTTT TERM 1620 1382502 - 1382454 - H 91 -7.7 -5.15969 | opp_overlap 1382468, overlap 1382456 CTCCAATCTAAAAAA TATTTCAAAGATAATTATATCAC TAT GTGTTATAATTTTCTTGGAAAAA TTAGGGGAGGTGGAA TERM 1621 1382500 - 1382456 - H 95 -10.3 -4.20888 | opp_overlap 1382468, overlap 1382454 CCAATCTAAAAAATA TTTCAAAGATAATTATATCAC TAT GTGTTATAATTTTCTTGGAAA AATTAGGGGAGGTGG TERM 1622 1382468 - 1382488 + H 71 -5.5 -4.63486 | opp_overlap 1382456 1382454 ATATTTCAAAGATAA TTATATCAC TAT GTGTTATAA TTTTCTTGGAAAAAT THA_1355 1382520 - 1382894 + | endoribonuclease L-PSP, putative TERM 1623 1383247 - 1383275 + G 100 -10.4 -4.39166 | opp_overlap 1383247 GCTTTTGAAAATAAA TGGAATCGGC AAAGAAACA GCCGATTCCA TTTTACTCTATGCAC TERM 1624 1383275 - 1383247 - g 100 -10.4 -4.64861 | opp_overlap 1383247 GCTTTTGAAAATAAA TGGAATCGGC AAAGAAACA GCCGATTCCA TTTTACTCTATGCAC THA_1356 1382897 - 1383529 + | base excision repair protein, HhH-GPD family THA_1357 1384772 - 1383522 - | sucrose transport protein TERM 1625 1383875 - 1383891 + g 76 -3.7 -5.46657 | overlap 1383872 GAATTACTATTGCAA GACCA ATTGTCA TGGTC TTTTTTCTTCCAATC TERM 1626 1384684 - 1384672 - G 71 -4.9 -4.82855 | GATGAAAGGGAAAAA TCTTT TAA AAAGA TAGGGACATAAGCAT TERM 1627 1384800 - 1384827 + H 88 -11.6 -3.36878 | opp_overlap 1384793 1384794 1384803 1384808 TTGAAAAATTCTATA TTATTATATCAC AGCT GTGATATAATAA TTGTAAATAAGTAAA TERM 1628 1384824 - 1384803 - H 72 -8.9 -2.66882 | opp_overlap 1384800, overlap 1384793 1384794 1384808 AAAAATTCTATATTA TTATATCAC AGCT GTGATATAA TAATTGTAAATAAGT mgsA 1384857 - 1385243 + | methylglyoxal synthase TERM 1629 1385821 - 1385806 - gf 77 -7.6 -4.05875 | TCCAAAAAATGTAAA TAAGGC TGAA GCCTTA AAGTATTTAATAGAT THA_1359 1385243 - 1386043 + | hypothetical protein THA_1360 1386003 - 1386497 + | hypothetical protein THA_1361 1386516 - 1386704 + | hypothetical protein asnS 1386729 - 1388024 + | asparaginyl-tRNA synthetase TERM 1630 1388051 - 1388026 - T 100 -14.9 -3.91897 | opp_overlap 1388026, overlap 1388031 GGGTGCATCCATAAA TTAAAGGGGGA AAAT TCCCCCTTTAA TTTTTACTATTAAAG TERM 1631 1388026 - 1388051 + T 100 -14.9 -4.87626 | opp_overlap 1388026 1388031 GGGTGCATCCATAAA TTAAAGGGGGA AAAT TCCCCCTTTAA TTTTTACTATTAAAG TERM 1632 1388046 - 1388031 - T 91 -10.4 -4.15066 | opp_overlap 1388026, overlap 1388026 CATCCATAAATTAAA GGGGGA AAAT TCCCCC TTTAATTTTTACTAT THA_1363 1389530 - 1388061 - | thermostable carboxypeptidase 1 TERM 1633 1389484 - 1389500 + g 93 -8.1 -5.07053 | opp_overlap 1389474 AGAAGCGAAAGTGCA CTTTCAA ATT TTGAAAG TTTTTTAAGATGATT THA_1364 1390392 - 1389544 - | acetyltransferase-related protein THA_1365 1390711 - 1390394 - | ribosomal protein L7A family THA_1366 1391493 - 1390714 - | hypothetical protein TERM 1634 1391351 - 1391386 + g 83 -2.1 -5.94743 | gap 1 AAATCTTTTGGAAGG TCAACATAC-ATATTT ATTTC AGCTATAGTATGTTGA TTTTTATTTTTTTTG THA_1367 1391705 - 1391496 - | hypothetical protein TERM 1635 1391783 - 1391811 + H 84 -9.9 -3.53012 | opp_overlap 1391773 GTTAACTTTCTTTTT TTATTTTAACATA ATT TGTGTTAAAATAA TTTAAGAAAGAAAAA dnaN 1391843 - 1392946 + | DNA polymerase III, beta subunit THA_1369 1392962 - 1393378 + | type IV pilin-related protein THA_1370 1393375 - 1394142 + | ABC-type multidrug transport system, ATPase component THA_1371 1394132 - 1394626 + | hypothetical protein TERM 1636 1394624 - 1394641 + F 100 -7 -6.07627 | opp_overlap 1394624 ATAGATGATTTAAAA TAGGCC AAAATC GGCCTA TTTTTTTTTGAAGAT TERM 1637 1394641 - 1394624 - f 80 -7.7 -4.23054 | opp_overlap 1394624 ATAGATGATTTAAAA TAGGCCA AAAT CGGCCTA TTTTTTTTTGAAGAT THA_1372 1394687 - 1395670 + | radical SAM domain protein TERM 1638 1396196 - 1396184 - gf 70 -6.3 -4.10007 | opp_overlap 1396183 1396184 AGAAGGCTGTGAAAA CAAAC GGA GTTTG GTTTGATCTGGGAGG TERM 1639 1396495 - 1396484 - gf 72 -5.8 -4.4296 | overlap 1396489 TAATAGACAGTAAAA CAGG ATAT CCTG CAGATAGTGCCATTA THA_1373 1395643 - 1396701 + | thiamine biosynthesis lipoprotein ApbE THA_1374 1396714 - 1397055 + | hypothetical protein TERM 1640 1397219 - 1397257 + G 79 -10.6 -3.00908 | gap 1, opp_overlap 1397228, overlap 1397228 ATGGACAATGGTTTA GAATAGTAACCTCCATG TTTGTT CATGGAGGTT-TTATTC ATTTAATATTTAATA TERM 1641 1397249 - 1397228 - g 83 -10.2 -3.41745 | opp_overlap 1397219 1397228 GGTTTAGAATAGTAA CCTCCATG TTTGTT CATGGAGG TTTTATTCATTTAAT TERM 1642 1397228 - 1397249 + G 100 -10.2 -4.85545 | opp_overlap 1397228, overlap 1397219 GGTTTAGAATAGTAA CCTCCATG TTTGTT CATGGAGG TTTTATTCATTTAAT THA_1375 1397065 - 1397736 + | integral membrane protein, Rhomboid family THA_1376 1397733 - 1398806 + | hypothetical protein THA_1377 1399336 - 1398803 - | hypothetical protein TERM 1643 1400601 - 1400613 + G 70 -5.5 -4.30576 | overlap 1400597 1400602 GATGCATTTGTGGAC TTGGG AAG CCCAG TTTTAGTAATAAAAA THA_1378 1399581 - 1400720 + | ErfK/YbiS/YcfS/YnhG family THA_1379 1400717 - 1401367 + | short-chain dehydrogenase/reductase SDR glgX 1403526 - 1401340 - | glycogen debranching enzyme GlgX TERM 1644 1403441 - 1403424 - G 86 -9.8 -3.76369 | opp_overlap 1403435, overlap 1403420 AAACAGCAAAATTAA CCCCGG TGTCGT CCGGGG TTGCACCTAATCTCG THA_1381 1403953 - 1403528 - | OsmC/Ohr family protein THA_1382 1404616 - 1403978 - | cytochrome c-type biogenesis protein CcdA THA_1383 1405296 - 1404628 - | hypothetical protein TERM 1645 1404991 - 1404973 - G 71 -6 -4.48449 | GTACCAAAAGACAAA TGTAGGAG TTC CTCTTACA CCGAATGCTCCAAAA TERM 1646 1405407 - 1405441 + r 79 -8.6 -3.93695 | opp_overlap 1405397 1405415, overlap 1405415 TATCACCTCTTTAAT TTTAAAAAGGCAGGTG TTA CACCTGCCTTGATCAA TTTATACCTAGTAAC TERM 1647 1405433 - 1405415 - R 100 -14.6 -4.66833 | opp_overlap 1405407 1405415, overlap 1405397 CTTTAATTTTAAAAA GGCAGGTG TTA CACCTGCC TTGATCAATTTATAC TERM 1648 1405415 - 1405433 + r 100 -14.6 -3.26546 | opp_overlap 1405397 1405415, overlap 1405407 CTTTAATTTTAAAAA GGCAGGTG TTA CACCTGCC TTGATCAATTTATAC THA_1384 1405680 - 1405438 - | hypothetical protein trxB 1406646 - 1405696 - | thioredoxin-disulfide reductase TERM 1649 1406399 - 1406415 + g 74 -5.2 -4.94902 | TCAGCTCCAAATGCC TTTGCA TGTTC TGCAAA TTTTTCTCCTAATTC TERM 1650 1406656 - 1406638 - G 74 -8.2 -3.68244 | ATTACCAAGGTCAAA GTGAACCA TAT TAGTTCAC CCCCTTATTTAATTG THA_1386 1407323 - 1406661 - | hypothetical protein TERM 1651 1407606 - 1407619 + H 73 -8.1 -3.42354 | GTCTCGAAAACCGGT GGGCA GCAA TGCCC TTGTGGGTTCGAGTC TERM 1652 1407679 - 1407652 - H 90 -11.4 -3.53091 | opp_overlap 1407652 1407658, overlap 1407658 ACCGCCTCCGCCAAA TACAAAGGCAGG TTTT CCTGCCTTTTTA TTTTTGTAGTATAAT TERM 1653 1407652 - 1407679 + H 100 -11.4 -4.95758 | opp_overlap 1407652 1407658, overlap 1407658 ACCGCCTCCGCCAAA TACAAAGGCAGG TTTT CCTGCCTTTTTA TTTTTGTAGTATAAT TERM 1654 1407673 - 1407658 - H 95 -10.4 -4.32857 | opp_overlap 1407652 1407658, overlap 1407652 TCCGCCAAATACAAA GGCAGG TTTT CCTGCC TTTTTATTTTTGTAG TERM 1655 1407658 - 1407673 + H 100 -10.4 -5.69262 | opp_overlap 1407658 1407652, overlap 1407652 TCCGCCAAATACAAA GGCAGG TTTT CCTGCC TTTTTATTTTTGTAG THA_1388 1407729 - 1408271 + | nudix hydrolase THA_1389 1408264 - 1408863 + | hypothetical protein TERM 1656 1409235 - 1409225 - g 70 -4 -4.89009 | AGAGGCAATGAAAAA TGTT GGT AACA CTGCAAGTAAAGTTC fliS 1408878 - 1409288 + | flagellar protein FliS THA_1391 1409305 - 1409505 + | hypothetical protein TERM 1657 1409510 - 1409540 + T 100 -15.6 -3.65902 | opp_overlap 1409515, overlap 1409515 TTTTTGTGTAGAGTA AAAAATGGAGCGCA TTT TGCGCTCCATTTTG TTTACATAAGATGAA TERM 1658 1409535 - 1409515 - T 100 -15.5 -5.21709 | opp_overlap 1409515 1409510 GTGTAGAGTAAAAAA TGGAGCGCA TTT TGCGCTCCA TTTTGTTTACATAAG TERM 1659 1409515 - 1409535 + T 100 -15.5 -4.90778 | opp_overlap 1409515, overlap 1409510 GTGTAGAGTAAAAAA TGGAGCGCA TTT TGCGCTCCA TTTTGTTTACATAAG THA_1392 1410780 - 1409542 - | hypothetical protein TERM 1660 1410923 - 1410945 + r 100 -15 -3.41528 | opp_overlap 1410923 TTATAATCAAAAAAA GGTCCTAGTT TTT AACTAGGACC TTGTAAACTTTATAT TERM 1661 1410945 - 1410923 - R 100 -15 -5.68023 | opp_overlap 1410923 TTATAATCAAAAAAA GGTCCTAGTT TTT AACTAGGACC TTGTAAACTTTATAT THA_1393 1411956 - 1410955 - | dipeptide ABC transporter, ATP-binding protein TERM 1662 1411914 - 1411946 + g 82 -6.5 -5.20154 | ACTTTTTTAAATTCT CAATTTTTAAAATTG TAT CAGTTTTATAGATTG TTTTTTGCATTATCT THA_1394 1412944 - 1411937 - | oligopeptide transport ATP-binding protein OppD THA_1395 1415478 - 1412950 - | dipeptide ABC transporter, permease protein TERM 1663 1413171 - 1413154 - G 74 -8.5 -3.69354 | opp_overlap 1413157, overlap 1413157 TCTTAGAAGTCCAAA GAAGCTT AAAG AAGCTTC TGAAAAAACTGCTCC TERM 1664 1415424 - 1415447 + g 76 -2.6 -5.50723 | GTTCCCAATTCTTTT TAAAATTCTT CAAA AATAATTTTA TTTTTATTTTGGTGA THA_1396 1416925 - 1415492 - | binding-protein-dependent transport systems inner membrane component TERM 1665 1416972 - 1416952 - R 80 -9 -3.63744 | gap 1, overlap 1416950 1416953 CTTTTTGTTAAAATA GCCCCCCTC GAAC GAGGGGG-C AAGAAATTATTTTAC TERM 1666 1416972 - 1416953 - R 72 -9.2 -2.78032 | overlap 1416952 1416950 TTTTTGTTAAAATAG CCCCCCTC GAAC GAGGGGGC AAGAAATTATTTTAC THA_1397 1418802 - 1416979 - | extracellular solute-binding protein, family 5, putative TERM 1667 1418594 - 1418613 + g 77 -7.2 -4.3255 | ATTTCAGCTGCTGCG GATGGGAT CAAC ATTCCATC TTTATTCATTACAAG TERM 1668 1419429 - 1419399 - g 83 -3.3 -5.75538 | opp_overlap 1419400 1419402, overlap 1419400 1419403 TCTAAAAAAGAAAAA TTAACACCTCC TGATTATTT GGAGGTGCTAT CTTCAAAAAAATATG TERM 1669 1419428 - 1419400 - g 71 -6.8 -4.02882 | opp_overlap 1419400 1419402, overlap 1419399 1419403 CTAAAAAAGAAAAAT TAACACCTCC TGATTATTT GGAGGTGCTA TCTTCAAAAAAATAT TERM 1670 1419425 - 1419403 - g 70 -6.3 -4.0464 | opp_overlap 1419402 1419400, overlap 1419400 1419399 AAAAAGAAAAATTAA CACCTCC TGATTATTT GGAGGTG CTATCTTCAAAAAAA THA_1398 1418949 - 1419488 + | putative methyltransferase TERM 1671 1419481 - 1419491 + T 77 -4 -5.37865 | opp_overlap 1419481 TTAAGTTAAAAAATA TACT TTA AGTA TTTTTTCATTGTTAG THA_1399 1420241 - 1419471 - | spermidine/putrescine ABC transporter, permease protein THA_1400 1421053 - 1420238 - | spermidine/putrescine ABC transporter, permease protein THA_1401 1422147 - 1421056 - | ferric cations import ATP-binding protein FbpC 1 TERM 1672 1421727 - 1421751 + g 71 -2.1 -5.38047 | overlap 1421728 1421729 1421732 TGGCTACTCTTTGTC TTTGACCACCT GAG AGTTGGTTAGG TTTTTTATATGCATG TERM 1673 1422072 - 1422026 - G 100 -14.1 -3.40403 | gap 2, opp_overlap 1422039 1422042, overlap 1422035 1422039 1422042 GTTGTTTTACCACAA CCTGAAGGACCAAGAAGGGAGAA AAA TTCTCCCTTCTTGA-C-TTCAAG GTTAACATTTTTTAA TERM 1674 1422065 - 1422035 - G 100 -17.8 -2.76453 | opp_overlap 1422039 1422042, overlap 1422026 1422039 1422042 CCACAACCTGAAGGA CCAAGAAGGGAGAA AAA TTCTCCCTTCTTGA CTTCAAGGTTAACAT TERM 1675 1422061 - 1422039 - G 100 -15 -3.28041 | opp_overlap 1422039 1422042, overlap 1422035 1422026 1422042 AACCTGAAGGACCAA GAAGGGAGAA AAA TTCTCCCTTC TTGACTTCAAGGTTA TERM 1676 1422039 - 1422061 + g 100 -15 -3.18199 | opp_overlap 1422035 1422026 1422039 1422042, overlap 1422042 AACCTGAAGGACCAA GAAGGGAGAA AAA TTCTCCCTTC TTGACTTCAAGGTTA TERM 1677 1422042 - 1422058 + g 91 -10.9 -3.73068 | opp_overlap 1422039 1422035 1422026 1422042, overlap 1422039 CTGAAGGACCAAGAA GGGAGAA AAA TTCTCCC TTCTTGACTTCAAGG TERM 1678 1422058 - 1422042 - G 91 -10.9 -3.77722 | opp_overlap 1422042 1422039, overlap 1422039 1422035 1422026 CTGAAGGACCAAGAA GGGAGAA AAA TTCTCCC TTCTTGACTTCAAGG THA_1402 1423185 - 1422163 - | spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein TERM 1679 1422347 - 1422309 - G 74 -9 -3.34013 | opp_overlap 1422321, overlap 1422310 TATTTGGTGAAGGAA GTCCTAAAAATTCGGCAA TTA TTGCAGCATTTTTAGGAT CAAGAATGTGATTTA TERM 1680 1422346 - 1422310 - G 100 -12.5 -2.60194 | opp_overlap 1422321, overlap 1422309 ATTTGGTGAAGGAAG TCCTAAAAATTCGGCAA TTA TTGCAGCATTTTTAGGA TCAAGAATGTGATTT TERM 1681 1423245 - 1423223 - R 100 -12.1 -5.06414 | opp_overlap 1423234 TTTTTTCAATAAAAA TGGATGGAC GACTT GTCCATCCA ACAAGTTATTAAATT speE 1424170 - 1423271 - | spermidine synthase speD 1424565 - 1424173 - | S-adenosylmethionine decarboxylase proenzyme THA_1405 1425126 - 1424593 - | transcriptional regulator, XRE family THA_1406 1425341 - 1426771 + | phosphomannomutase, putative THA_1407 1427511 - 1426723 - | hypothetical protein THA_1408 1428196 - 1427522 - | hypothetical protein TERM 1682 1428101 - 1428089 - G 75 -4.9 -5.0538 | opp_overlap 1428089 CCCGACTGCAAAAAA TAGAA TTT TTCTA ATATTTTCCGGAAAT THA_1409 1429030 - 1428200 - | integral membrane protein DUF6 THA_1410 1429418 - 1429014 - | hypothetical protein TERM 1683 1429054 - 1429066 + gr 71 -4.9 -4.72188 | TTTAAGTACTCTTCT TGTTT TTG AAACA TTTCTTTTGCATTGG THA_1411 1430772 - 1429393 - | metal dependent phosphohydrolase THA_1412 1431716 - 1430769 - | PhoH protein THA_1413 1432418 - 1431726 - | TPR Domain containing protein, putative THA_1414 1433326 - 1432451 - | LAO/AO transport system ATPase THA_1415 1433727 - 1433329 - | methylmalonyl-CoAmutase, subunit alpha THA_1416 1434146 - 1433739 - | glutaconyl-CoA decarboxylase subunit gamma TERM 1684 1433966 - 1433986 + gr 82 -4.7 -5.4505 | overlap 1433946 CAGAAGATGGGCTTG CTGCTTC TTGTTTT GGAGCAG TTTTTTCTTCGACAG THA_1417 1434466 - 1434119 - | hypothetical protein TERM 1685 1434352 - 1434364 + gr 78 -4.1 -5.40072 | opp_overlap 1434363 GAATTTTTTTAGGTA GTTTC ATG GAAGC TTTTTTTGAAAAAAA THA_1418 1436018 - 1434477 - | propionyl-CoA carboxylase, beta subunit TERM 1686 1436206 - 1436221 + r 100 -7.6 -5.36441 | overlap 1436216 CATTAATAGCTACAT GGTGAA TTCC TTCACC TTTTTTCTCTAAAAA THA_1419 1436439 - 1436230 - | methylmalonyl-CoA epimerase THA_1420 1436821 - 1436504 - | transcriptional regulatory protein THA_1421 1437527 - 1436808 - | hypothetical protein secA 1440102 - 1437532 - | preprotein translocase, SecA subunit TERM 1687 1437885 - 1437903 + g 73 -6 -4.5815 | opp_overlap 1437875 1437874, overlap 1437875 1437875 TGAACTTTCCAATTT TTGGGAAA TCT TCTCCCAA TTCTTTCTTTTTATT TERM 1688 1439189 - 1439205 + g 73 -3.7 -5.32882 | opp_overlap 1439202 TATTCTATACCTTCG TCTGTTA ATA TTACAGA TTTTTTCTGCTCGTC THA_1423 1440707 - 1440099 - | probable septum site-determining protein MinC, putative THA_1424 1441773 - 1440724 - | HD domain protein TERM 1689 1441082 - 1441119 + g 76 -2.9 -5.5762 | gap 1, opp_overlap 1441077 1441076, overlap 1441084 1441086 CCTGTAAAAGCTTCA GGA-AGGTCATGAAGAAG TGC CTTTTTTATCACCTCTTC TTTTTTATCTTTACT THA_1425 1442470 - 1441814 - | UBA/THIF-type NAD/FAD binding protein THA_1426 1442754 - 1442470 - | hypothetical protein TERM 1690 1442779 - 1442797 + H 79 -3.3 -5.55664 | CACCTTTTGATTATT TTATATA TCTAT TATATAA TTTTTTTGGTGATAA THA_1427 1442816 - 1443577 + | serine/threonine protein phosphatase TERM 1691 1443635 - 1443649 + G 71 -5.7 -4.50241 | GGGGATTAACCTTTC CCATC CAAAA GATGG TTTTAGTTGATATTT TERM 1692 1444370 - 1444391 + G 71 -2.3 -5.40474 | opp_overlap 1444370 1444371, overlap 1444373 TGATATTATCAATAA TTCCCGAAA AATA TTTTAGGAA TTTTTTTAGACACGT THA_1428 1443574 - 1444416 + | permeases of the drug/metabolite transporter flgB 1444438 - 1444821 + | flagellar basal-body rod protein FlgB flgC 1444833 - 1445246 + | flagellar basal-body rod protein FlgC fliE 1445252 - 1445539 + | flagellar hook-basal body complex protein (FliE) TERM 1693 1445588 - 1445557 - T 100 -16 -5.01732 | opp_overlap 1445560, overlap 1445560 AACTTTGTGAAAAAA TAAGAAGGCTCCGA ATTT TCGGAGCCTTCTTT TATTATTCAACTTGT TERM 1694 1445585 - 1445560 - T 100 -17.7 -4.61482 | opp_overlap 1445560, overlap 1445557 TTTGTGAAAAAATAA GAAGGCTCCGA ATTT TCGGAGCCTTC TTTTATTATTCAACT TERM 1695 1445560 - 1445585 + T 100 -17.7 -4.90079 | opp_overlap 1445560 1445557 TTTGTGAAAAAATAA GAAGGCTCCGA ATTT TCGGAGCCTTC TTTTATTATTCAACT THA_1432 1446019 - 1445591 - | heat shock protein, Hsp20 family dnaK 1447842 - 1446046 - | chaperone protein DnaK TERM 1696 1447161 - 1447173 + g 75 -4.1 -5.2166 | TGTCCTCTCTTAAAT CGACA CCG TGTTG TTTTTTAAATTCTTC TERM 1697 1447948 - 1447917 - R 91 -7.4 -5.27206 | opp_overlap 1447917 TATAGATAATAAAAA TCAAGAATGTCTAT AAAT AGAGGCATTCTTGA TTGTAATTGAAAATT TERM 1698 1447917 - 1447948 + r 80 -9.6 -3.51597 | opp_overlap 1447917 TATAGATAATAAAAA TCAAGAATGTCTAT AAAT AGAGGCATTCTTGA TTGTAATTGAAAATT THA_1434 1448324 - 1447998 - | hypothetical protein THA_1435 1449579 - 1448326 - | hypothetical protein TERM 1699 1448488 - 1448502 + g 70 -5.8 -4.35042 | overlap 1448485 TTCTGAAAGTTCTTT TTTGAA AAT TTCAAA TTCTTTTGTAGTAAC THA_1436 1450176 - 1450997 + | integrase, catalytic region THA_1437 1451553 - 1451023 - | hypothetical protein THA_1439 1452694 - 1452308 - | transcriptional regulator, GntR family TERM 1700 1452749 - 1452694 - R 76 -9.4 -3.05159 | opp_overlap 1452704 1452705, overlap 1452696 TTATAGTAAACCACA TATTTTACCTCCTTCTACTGTAATAT TATA ATATTACAGTAGAAAATTGTCAAATA ATAAAAAATCCCCAA TERM 1701 1452705 - 1452738 + r 86 -11.3 -2.60212 | opp_overlap 1452696 1452694, overlap 1452704 CACATATTTTACCTC CTTCTACTGTAATAT TATA ATATTACAGTAGAAA ATTGTCAAATAATAA TERM 1702 1452782 - 1452758 - R 100 -17.3 -5.72254 | TCAAATAATAAAAAA TCCCCAAGCAA ATT TTGCTTGGGGA TAAAGATTCAAGTTG THA_1440 1454005 - 1452803 - | acetyl-CoA acetyltransferase THA_1441 1454673 - 1454029 - | acetate CoA-transferase subunit beta THA_1442 1455320 - 1454670 - | acetate CoA-transferase subunit alpha TERM 1703 1454815 - 1454852 + g 82 -4.3 -5.59564 | gap 1, opp_overlap 1454824, overlap 1454824 GGGTTAAAATTTTCC GC-GGTTAAATTGAAAAC AAG GTTTCCAATATAATCAGC TTTTTTTGCCTTTAT TERM 1704 1455585 - 1455548 - R 100 -14.4 -3.3761 | opp_overlap 1455553 1455583, overlap 1455553 TTGTTTGAATAAAAG TAAAACCCGTTTCTAG AATTAA CTAGAAACGGGTTTTT ATATATTTGATATAT TERM 1705 1455580 - 1455553 - R 100 -14.3 -4.78029 | opp_overlap 1455553, overlap 1455548 TGAATAAAAGTAAAA CCCGTTTCTAG AATTAA CTAGAAACGGG TTTTTATATATTTGA TERM 1706 1455553 - 1455580 + r 100 -14.3 -5.14985 | opp_overlap 1455553 1455548 TGAATAAAAGTAAAA CCCGTTTCTAG AATTAA CTAGAAACGGG TTTTTATATATTTGA gltA 1456998 - 1455625 - | glutamate synthase (NADPH), homotetrameric gltD 1457825 - 1456989 - | glutamate synthase, small subunit THA_1445 1458661 - 1457837 - | sugar kinase, putative TERM 1707 1458059 - 1458086 + g 74 -2.2 -5.54264 | gap 1, overlap 1458061 TTTTAGTACTATATG TTTTGCAAAG-TA TGA TAGTTTTGCAAGA TTTTTTTCGATATTT THA_1446 1459571 - 1458639 - | glucose kinase THA_1447 1460335 - 1459595 - | radical SAM domain protein THA_1448 1461192 - 1460329 - | radical SAM domain protein THA_1449 1462396 - 1461203 - | methyl-accepting chemotaxis sensory transducer, putative TERM 1708 1462287 - 1462297 + g 75 -4 -5.27023 | opp_overlap 1462287 TAATTGTCAAATAAA TCAT CAT ATGA TTTTGTTTTTGCAAT THA_1450 1463738 - 1462461 - | respons regulator TERM 1709 1462691 - 1462713 + g 80 -2.1 -5.73978 | CATATTTTGTTCCTT TATTCTTTA ATAAA TGAGGAATA TTTTTTATTTCTACT THA_1451 1464294 - 1463743 - | chemotaxis response regulator protein-glutamate methylesterase ofgroup 2 operon, putative THA_1452 1466068 - 1464305 - | CheA signal transduction histidine kinase, putative TERM 1710 1465674 - 1465690 + g 80 -6.7 -4.8143 | TACTCGCTAATTTCA GAAATTT TAA AAATTTC TTTTTCGGTTATTAC THA_1453 1466757 - 1466074 - | hypothetical protein THA_1454 1467785 - 1466772 - | chemotaxis protein methyltransferase CheR TERM 1711 1466959 - 1466969 + g 91 -4 -6.06529 | ACCATTTTGTATGCG GAAT CAA ATTC TTTTTTTTCTATATA TERM 1712 1467307 - 1467327 + g 72 -2.7 -5.48787 | opp_overlap 1467307, overlap 1467292 1467309 TTTAAATCTAATATA TTTAAATTT TCA AAATTTACA TTTTTTCTATATTGT TERM 1713 1467654 - 1467676 + g 76 -6.4 -4.53765 | opp_overlap 1467651 ACCAATAGTTAAGTT CATTAGAACA AGA TTTTCTAATG TTTTATCATCTATAT TERM 1714 1468181 - 1468163 - g 95 -11.8 -3.68261 | GGAGAAGAGTTTAAA CTTCCCAA TGT TTGGGAAG AAGAAAAATGGAAAA TERM 1715 1468551 - 1468537 - g 76 -3.6 -5.4251 | TGCATACACAAAAAA GAAAAC CTC ATTTTC CTGGCCAGAGATTTC TERM 1716 1468749 - 1468733 - g 72 -6.5 -4.23007 | GATAGAAGTGTAAAA TCGGGAG GAA CTACCGA AGTTGAAATTTTAAA THA_1455 1467854 - 1468792 + | DNA polymerase III, delta subunit superfamily TERM 1717 1469740 - 1469750 + G 83 -3.2 -5.69379 | overlap 1469735 1469734 AATTCAGATTCTCTT GCAG AGG TTGC TTTTTTTAGTTCTCT TERM 1718 1469928 - 1469940 + G 79 -5.5 -5.13741 | GCTGGCATTAATTTT TGCTC CAG GGGCA TTTTTCTTAAATTCA THA_1456 1468795 - 1470906 + | hypothetical protein TERM 1719 1470970 - 1470957 - g 76 -3.8 -5.45726 | opp_overlap 1470957 GAGATTTTAAAAAAA GAGG TAATAT CCTC TAATCTTTCGTTATT THA_1457 1470918 - 1471442 + | hypothetical protein THA_1458 1471430 - 1471969 + | hypothetical protein THA_1459 1471977 - 1473260 + | hypothetical protein TERM 1720 1473513 - 1473523 + G 70 -5.4 -4.59414 | CCAACTTGGATTAGT TCCA TCA TGGA TTTTAGTTGTTATAG pgsA 1473265 - 1473789 + | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase TERM 1721 1474121 - 1474141 + G 76 -7.6 -3.95836 | overlap 1474117 1474122 TATCTTGAAATGAGG TCTGAGCT GAAAA AGCTCAGG TTGTCTTTTGACGAT TERM 1722 1474122 - 1474140 + G 72 -8.9 -2.96779 | overlap 1474121 1474117 ATCTTGAAATGAGGT CTGAGCT GAAAA AGCTCAG GTTGTCTTTTGACGA THA_1461 1473797 - 1474369 + | 2'-5' RNA ligase TERM 1723 1474433 - 1474423 - gf 75 -4 -5.18561 | GAAAGATTGAAAAAA CTTA CGG TAAG GGTTCAATAATGTTT recA 1474359 - 1475420 + | protein RecA recX 1475395 - 1475787 + | regulatory protein RecX THA_1464 1475789 - 1477321 + | hypothetical protein TERM 1724 1477380 - 1477418 + T 83 -6.9 -4.8622 | gap 2, opp_overlap 1477380 GAACGAAATAAAAAA CACCCCC-GGA-AGTGATA AAA TATAACTATCTAGGGGGTG TTTTTCATTGGCAAA TERM 1725 1477418 - 1477380 - T 90 -4.7 -5.72053 | gap 2, opp_overlap 1477380 GAACGAAATAAAAAA CACCCCC-GGA-AGTGATA AAA TATAACTATCTAGGGGGTG TTTTTCATTGGCAAA TERM 1726 1477519 - 1477506 - T 71 -5.3 -4.67982 | opp_overlap 1477506 TTTCATTGAAGAAAA TCTTC CTAA GAAGA CTATTGCTTCTCTTT TERM 1727 1478547 - 1478519 - T 100 -11.8 -5.09426 | opp_overlap 1478519 GGCAAGGTTAAAAAA CATGGCTCCGGT GGAAT ACCGAAACCATG TTGTTTGAAAAGTGT TERM 1728 1478519 - 1478547 + T 77 -8.1 -3.91984 | opp_overlap 1478519 GGCAAGGTTAAAAAA CATGGCTCCGGTG GAA TACCGAAACCATG TTGTTTGAAAAGTGT THA_1465 1479813 - 1478623 - | aspartate aminotransferase TERM 1729 1479020 - 1479033 + g 74 -6.7 -4.25104 | opp_overlap 1479019 TCAGGTGGGCAAAGC CTTGC TTGG GCAAG TTTTAATGCAGCAGC TERM 1730 1479243 - 1479257 + g 75 -7.2 -4.1774 | CTAAATTGAATTTTT TTGCAA TAT TTGCAA TTATTTCTAGTTCTT THA_1466 1480417 - 1479815 - | YvyE TERM 1731 1480349 - 1480364 + g 93 -4.8 -6.10295 | opp_overlap 1480349 AAGAGTGGCAATAAA TATAGA GCGT TCTATA TTTTTTTTGTGTTCA THA_1467 1480968 - 1480414 - | phosphodiesterase, family TERM 1732 1480878 - 1480866 - G 74 -6.3 -4.4009 | opp_overlap 1480870 GGCCATGGTATAAAA CATCT CCG AGATG GAATATTTCATCAAC THA_1468 1481950 - 1481069 - | indigoidine synthase A like protein THA_1469 1482722 - 1481964 - | hypothetical protein TERM 1733 1482092 - 1482108 + g 85 -8 -4.788 | GGATTGTAAATGCTT GGGTGA CCATT TCACCC TTTTTGGGTTCATTT TERM 1734 1482724 - 1482702 - G 72 -5 -4.81752 | opp_overlap 1482702 1482705, overlap 1482705 AAAAATAGTTAAAAA TAATGAAAAA AGT TTTTTCATAA ATTTCACCTCCTATG TERM 1735 1482721 - 1482705 - G 76 -6.7 -4.47118 | opp_overlap 1482705 1482702, overlap 1482702 AATAGTTAAAAATAA TGAAAAA AGT TTTTTCA TAAATTTCACCTCCT TERM 1736 1482788 - 1482752 - R 100 -18.3 -2.66435 | opp_overlap 1482761 1482785, overlap 1482756 1482761 ATGTTGATTATATCA TAAAGTAAATTCCCCAC AAT GCGGGGAATTTACTCTA AATGTTAGATATTAA TERM 1737 1482784 - 1482756 - R 100 -16.9 -4.03078 | opp_overlap 1482761, overlap 1482752 1482761 TGATTATATCATAAA GTAAATTCCCCAC AAT GCGGGGAATTTAC TCTAAATGTTAGATA TERM 1738 1482779 - 1482761 - R 100 -11 -4.16785 | opp_overlap 1482761, overlap 1482756 1482752 ATATCATAAAGTAAA TTCCCCAC AAT GCGGGGAA TTTACTCTAAATGTT TERM 1739 1482761 - 1482779 + r 79 -8.8 -3.8594 | opp_overlap 1482761 1482756 1482752 ATATCATAAAGTAAA TTCCCCAC AAT GCGGGGAA TTTACTCTAAATGTT THA_1470 1484420 - 1482786 - | phosphoenolpyruvate carboxykinase TERM 1740 1484718 - 1484694 - R 100 -13 -5.10208 | opp_overlap 1484688 GAATCTTAATAAAAA GGCTCCATTT ATTTG AAATGGAGCC TTAAAATTTAAAAAG purL 1486539 - 1484746 - | phosphoribosylformylglycinamidine synthase II TERM 1741 1486391 - 1486415 + g 79 -5.8 -5.07941 | gap 1 AGACCTGCGTTTCCC GATTCCTCACT TACA AGTG-GGAGTC TTTTTATATACTTTT purQ 1487168 - 1486536 - | phosphoribosylformylglycinamidine synthase I purS 1487413 - 1487165 - | phosphoribosylformylglycinamidine synthase, PurS protein purC 1488075 - 1487389 - | phosphoribosylaminoimidazole-succinocarboxamide synthase TERM 1742 1487838 - 1487862 + g 75 -4.3 -5.27476 | overlap 1487841 TTACTACGACTTCAA GTGGTAACATT TTT AATGATACTGC TTTTATTTTGTTAGG purE 1488541 - 1488089 - | phosphoribosylaminoimidazole carboxylase, catalytic subunit TERM 1743 1488568 - 1488592 + r 100 -8.5 -5.46629 | opp_overlap 1488568 CTAAAAAGCAAAAAA TCCCCACCATC ATA GATGGCAGGGA TTTTTTTAAGATATT TERM 1744 1488592 - 1488568 - R 100 -12.9 -5.54079 | opp_overlap 1488568 CTAAAAAGCAAAAAA TCCCCACCATC ATA GATGGCAGGGA TTTTTTTAAGATATT cysK 1489609 - 1488752 - | cysteine synthase A TERM 1745 1489070 - 1489084 + g 71 -2.2 -5.42862 | opp_overlap 1489064 1489082 AGCTACAATTTTAAC TTTTTT GTT AAAGAA TTTTTTTAAAACTCT TERM 1746 1489518 - 1489544 + g 74 -7.4 -3.95042 | overlap 1489521 ATAAAATAAGCTGCA CGATCCTTCA CACTACC TGAAGGATTG TTTCGTTCAAATTTT THA_1477 1490196 - 1489627 - | serine acetyltransferase TERM 1747 1490087 - 1490077 - G 70 -5.4 -4.56702 | TGTTAAGGAAATAAA TCCA ACA TGGA ATAGAACTTGATATG TERM 1748 1490296 - 1490283 - H 72 -2.5 -5.42259 | overlap 1490265 TTATTTGTAAAAAAA TTATT GCAG AATAA ATCAATTAGTTTTAC THA_1478 1490356 - 1491267 + | L-lactate dehydrogenase THA_1479 1493061 - 1491262 - | N-acetyl-beta-hexosaminidase TERM 1749 1491347 - 1491384 + g 77 -7.3 -4.31397 | opp_overlap 1491350, overlap 1491350 AGCCATATTTTTTTA TAATTTTCAATTAGTTT TTCT AATCTAATTGAAAATTC TTCTTTTGTAACACT TERM 1750 1491350 - 1491381 + g 84 -9 -4.26938 | opp_overlap 1491350, overlap 1491347 CATATTTTTTTATAA TTTTCAATTAGTTT TTCT AATCTAATTGAAAA TTCTTCTTTTGTAAC TERM 1751 1491381 - 1491350 - G 74 -9 -3.29829 | opp_overlap 1491350 1491347 CATATTTTTTTATAA TTTTCAATTAGTTT TTCT AATCTAATTGAAAA TTCTTCTTTTGTAAC TERM 1752 1492532 - 1492566 + g 81 -10.2 -3.13475 | opp_overlap 1492536 GGTGAATAGTCTTTC CAAACCTTTTCATGTT CTT GATATGAAAAGGTATG TTCGATATAAAGTTG THA_1480 1493245 - 1493901 + | beta-lactamase domain protein THA_1481 1493927 - 1494268 + | transcriptional regulator, PadR family THA_1482 1494309 - 1494932 + | membrane-associated phospholipid phosphatase TERM 1753 1494979 - 1495003 + F 79 -3.6 -5.52096 | GTAATTTAAACAGAA TGGCTTTGGT AATCC ATTGAAGCCA TTTTTTATTGAGTTT TERM 1754 1495892 - 1495904 + F 86 -4.1 -5.9003 | TTGGTTTTATTATAC CACTT TGG GAGTG TTTTTTTATTAATTT THA_1485 1496345 - 1496698 + | outer membrane protein CzcC THA_1486 1496714 - 1497616 + | periplasmic copper-binding protein NosD, putative TERM 1755 1497640 - 1497665 + F 100 -14.1 -5.84381 | opp_overlap 1497640 AAGAATTTTTAGAAA GTCGCTATGGG ATAT TCCATAGCGAC TTTTTTTGTTGATAA TERM 1756 1497665 - 1497640 - f 100 -13.4 -3.90729 | opp_overlap 1497640 AAGAATTTTTAGAAA GTCGCTATGG GATATT CCATAGCGAC TTTTTTTGTTGATAA TERM 1757 1498523 - 1498509 - g 79 -7.2 -4.5123 | opp_overlap 1498509 1498508 1498515 AAGTTAGGAAAGAAA TTTGGA GCA TCCAAA GTATTGATGCTTTCT THA_1487 1497741 - 1498892 + | transporter, major facilitator family THA_1488 1499467 - 1498883 - | hypothetical protein THA_1489 1499859 - 1499422 - | methylated-DNA--protein-cysteine methyltransferase THA_1490 1499898 - 1500797 + | esterase TERM 1758 1501185 - 1501208 + G 71 -7 -3.89346 | opp_overlap 1501191 TGATACATTAAGTGT TTTAAATTTT GCAA AAAATTTAAA TTTGTGGCATGAAAA THA_1491 1500790 - 1501779 + | hypothetical protein THA_1492 1503291 - 1501780 - | sensory box histidine kinase, putative TERM 1759 1502625 - 1502636 + g 74 -3 -5.47218 | opp_overlap 1502625 1502634 AAGATAGGTAAAGAC TAAC TAAA GTTA TTTTTTTAAATAAAG TERM 1760 1503095 - 1503111 + g 71 -4.5 -4.71426 | TATAGAAATGAATTT TTAGGTA CAT TATCTAA TTTTGTTACTAAAGA TERM 1761 1503177 - 1503160 - G 81 -2.7 -5.67529 | overlap 1503161 AAGCAAAAAGAAAAA GGGAATT TTTA AATTTCC ACCGTATTTTTTAGA THA_1493 1503403 - 1504095 + | glycerophosphodiester phosphodiesterase TERM 1762 1504122 - 1504093 - T 100 -13.7 -5.76633 | opp_overlap 1504097, overlap 1504097 GGATATATAAAAAAA TAAACCTCCGAAG TTTC CTTCGGAGGTTTT CTACTTTATATAACA TERM 1763 1504118 - 1504097 - T 100 -14.5 -5.29742 | opp_overlap 1504097, overlap 1504093 ATATAAAAAAATAAA CCTCCGAAG TTTC CTTCGGAGG TTTTCTACTTTATAT TERM 1764 1504097 - 1504118 + T 100 -14.5 -4.6575 | opp_overlap 1504097 1504093 ATATAAAAAAATAAA CCTCCGAAG TTTC CTTCGGAGG TTTTCTACTTTATAT bioF 1505303 - 1504128 - | 8-amino-7-oxononanoate synthase TERM 1765 1504999 - 1505009 + g 76 -5.4 -5.0538 | GATTGTAAGAATATT GTAG CTT CTAC TTTTTTAAACTCGGC THA_1495 1506346 - 1505315 - | L-threonine 3-dehydrogenase THA_1496 1507813 - 1506479 - | putative integral membrane protein TERM 1766 1506940 - 1506980 + g 100 -10.2 -4.81851 | gap 1, opp_overlap 1506949, overlap 1506935 1506941 CTACACCGGCTATTC T-TTGCAAAAGAAAATTAT TTAG ATAGTTTTCTTTTGCAATA TTTTTAGCTTTCAAT TERM 1767 1506941 - 1506978 + g 100 -15.3 -4.02139 | opp_overlap 1506949, overlap 1506935 1506940 TACACCGGCTATTCT TTGCAAAAGAAAATTAT TTAG ATAGTTTTCTTTTGCAA TATTTTTAGCTTTCA TERM 1768 1507286 - 1507273 - G 72 -5.3 -4.71828 | ATTTTACTAATAAAA GGTTA AGTA TAACC AATCCACCTACTGTG TERM 1769 1507513 - 1507498 - G 70 -6.2 -4.17491 | opp_overlap 1507498 1507496 ATGAAACTCCTAAAA TACCTT GGAA AAGGTA TGTTCCTACTATTAT THA_1497 1508369 - 1507794 - | hypothetical protein THA_1498 1508858 - 1508391 - | 1-acyl-sn-glycerol-3-phosphate acyltransferase TERM 1770 1508650 - 1508660 + g 70 -5.4 -4.58395 | opp_overlap 1508650 GATTTAAATAGAGGA CCAA GTA TTGG TTTTTCAAACGTACC THA_1499 1508991 - 1510304 + | mate efflux family protein THA_1500 1510318 - 1511160 + | hypothetical protein TERM 1771 1511165 - 1511209 + T 72 -5.9 -4.54026 | opp_overlap 1511155 1511171, overlap 1511171 AATTATTTTAGATAT AAAAAAGACTTCTGAGATA ACTTAAA TATCTCAGAAGTCTTTGCA TTGTTTTATTTGAAA TERM 1772 1511171 - 1511203 + T 100 -13.7 -3.93619 | opp_overlap 1511171, overlap 1511165 TTTAGATATAAAAAA GACTTCTGAGATA ACTTAAA TATCTCAGAAGTC TTTGCATTGTTTTAT TERM 1773 1511203 - 1511171 - T 100 -13.7 -5.4251 | opp_overlap 1511171 1511165 TTTAGATATAAAAAA GACTTCTGAGATA ACTTAAA TATCTCAGAAGTC TTTGCATTGTTTTAT THA_1501 1512024 - 1511215 - | ABC transporter, ATP-binding protein TERM 1774 1511337 - 1511354 + g 85 -4.9 -5.56673 | CACCTACAAGTCCTA TAACTTC TCCA GAGGTTA TTTTTTCTTCTGAAT THA_1502 1512577 - 1512011 - | hypothetical protein TERM 1775 1512559 - 1512569 + g 70 -4 -4.93696 | opp_overlap 1512559 GAGTAATTTCAAAGA GATT TTC AATC TTTTTCATCTTTCCA THA_1503 1512926 - 1512564 - | transcriptional regulator, GntR family THA_1504 1513883 - 1512942 - | hypothetical protein THA_1505 1515351 - 1513987 - | aspartate ammonia-lyase THA_1506 1516547 - 1515348 - | small GTP-binding protein domain protein THA_1507 1516858 - 1517472 + | hypothetical protein TERM 1776 1518322 - 1518312 - g 78 -4 -5.4593 | TCAAAACAAGAAAAA TCTT CCG AAGA AATACAATATATTTT THA_1508 1517475 - 1518491 + | geranylgeranyl diphosphate synthase THA_1509 1518494 - 1519042 + | hypothetical protein TERM 1777 1519589 - 1519599 + G 74 -6.8 -4.25104 | opp_overlap 1519588 1519584 GCAGATTTAATAATT CCAC GTG GTGG TTTTAATGAAAAGGC THA_1510 1519049 - 1519663 + | udk uridine kinase TERM 1778 1520181 - 1520165 - g 72 -8.1 -3.25896 | overlap 1520163 TGACGATTTAGAAGA TGACTTT AGA AAAGTCA TGGAAAAGGTCGTAG THA_1511 1519686 - 1521194 + | HD domain protein THA_1512 1521196 - 1521945 + | type III pantothenate kinase THA_1513 1521926 - 1523281 + | Fe-S oxidoreductase THA_1514 1523265 - 1523885 + | peptidase, M50 family THA_1515 1523890 - 1524135 + | coiled-coil domain containing 70 TERM 1779 1524235 - 1524256 + G 75 -5.9 -4.8083 | opp_overlap 1524233 1524235 1524236, overlap 1524236 TGAAAAATATGAAGA GCTTTCATC TACC GATGAAAGA TTTTTGGTAATGTTG TERM 1780 1524255 - 1524236 - g 73 -9.4 -2.61214 | opp_overlap 1524236 1524235, overlap 1524235 1524233 GAAAAATATGAAGAG CTTTCATC TACC GATGAAAG ATTTTTGGTAATGTT TERM 1781 1524236 - 1524255 + G 79 -9.4 -3.47413 | opp_overlap 1524235 1524233 1524236, overlap 1524235 GAAAAATATGAAGAG CTTTCATC TACC GATGAAAG ATTTTTGGTAATGTT THA_1516 1524116 - 1524376 + | hypothetical protein TERM 1782 1524497 - 1524481 - g 100 -10.9 -4.26903 | opp_overlap 1524480 1524479 1524489 CTTATGGTATTAAAA CTCCAGA AGT TCTGGAG AGCTTTATTTTTGAA murI 1524357 - 1525148 + | glutamate racemase THA_1518 1525132 - 1525944 + | hypothetical protein THA_1519 1525944 - 1526882 + | hypothetical protein THA_1520 1526887 - 1527804 + | hypothetical protein nrdR 1527810 - 1528265 + | transcriptional regulator NrdR TERM 1783 1528523 - 1528547 + G 74 -8.7 -3.21806 | opp_overlap 1528519 1528530, overlap 1528519 1528517 1528526 1528530 TTATTGAAGGATTGG ATACCAATGTT ATT AACATTGGTAA TTGGGTGTTAATTAA TERM 1784 1528526 - 1528544 + G 78 -10.4 -2.79248 | opp_overlap 1528519 1528530, overlap 1528519 1528517 1528523 1528530 TTGAAGGATTGGATA CCAATGTT ATT AACATTGG TAATTGGGTGTTAAT TERM 1785 1528600 - 1528589 - g 78 -3 -5.55769 | CGGGAGAAGAAAAAA CAAT TCAG ATTG TAACACCTCATGAAG THA_1522 1528282 - 1528752 + | transcription elongation factor GreA TERM 1786 1530135 - 1530148 + G 70 -8.1 -3.1978 | overlap 1530134 CTCGAATACGGTATG CCACC TACT GGTGG TCTTGGTATAGGAAT lysS 1528779 - 1530287 + | lysyl-tRNA synthetase TERM 1787 1530315 - 1530305 - g 78 -6.8 -4.58685 | opp_overlap 1530305 AAATGGTTTGAAAAA GCAC ATG GTGC TATAATTTGGACGAT TERM 1788 1530653 - 1530633 - g 72 -4.8 -4.99947 | CTCAAGTAAATAAAA TTTCACCT ACTAA AGATGAAA TAAATCAAGAACTTG TERM 1789 1531252 - 1531240 - g 75 -4.9 -5.13741 | opp_overlap 1531248, overlap 1531248 TGAATTTAAGAAAAA TGAAA ATG TTTCA TCAGAAATTATTGAT TERM 1790 1531798 - 1531782 - g 73 -3.7 -5.20222 | overlap 1531793 ACGAAATAAATAAAA TGTTGAA AGA TGCAACA ACTGCTGAACAATAT THA_1524 1530284 - 1531912 + | hypothetical protein TERM 1791 1531932 - 1531958 + F 100 -15.3 -5.03314 | opp_overlap 1531915 1531932 TACTTTTAACAATAA TTTAAGCGGCC TTTTC GGCCGCTTAAA TTTTTTAGCAATACG TERM 1792 1531958 - 1531932 - f 100 -15.3 -3.95324 | opp_overlap 1531932, overlap 1531915 TACTTTTAACAATAA TTTAAGCGGCC TTTTC GGCCGCTTAAA TTTTTTAGCAATACG THA_1525 1532009 - 1532248 + | S4 domain protein THA_1526 1532245 - 1533183 + | hypothetical protein THA_1527 1533207 - 1534943 + | ABC transporter, ATP-binding protein TERM 1793 1534959 - 1534947 - f 100 -9.1 -5.45802 | opp_overlap 1534946 1534947 TTTTCAAAATAAAAA GGTGC CGT GCACC CTTGCTTCGATTACG TERM 1794 1534947 - 1534959 + F 72 -9.1 -2.63991 | opp_overlap 1534947, overlap 1534946 TTTTCAAAATAAAAA GGTGC CGT GCACC CTTGCTTCGATTACG THA_1528 1535341 - 1535946 + | hypothetical protein THA_1529 1535966 - 1536976 + | oligopeptide transport ATP-binding protein AppD THA_1530 1536969 - 1537964 + | oligopeptide transport ATP-binding protein AppF THA_1531 1537969 - 1539708 + | oligopeptide ABC transporter, periplasmic oligopeptide-binding protein TERM 1795 1539718 - 1539747 + F 82 -8.6 -4.14392 | gap 2, opp_overlap 1539717 1539716 CAGTAAAAAATTATG TGGGCGCGTGAGGT GTTA GCC-C-CGCGCCCA TTTTAAAAATTAAAA THA_1532 1539778 - 1540743 + | oligopeptide transport system permease protein AppB THA_1533 1540757 - 1542385 + | oligopeptide ABC transporter, permease protein TERM 1796 1542421 - 1542478 + F 100 -14.7 -2.7362 | gap 1, opp_overlap 1542429 1542431 1542433, overlap 1542433 TATATTCATTTTGGA TTTATAAATAGACCCGTTTCTAGTATAA AAG TTG-ACTAGAAACGGGTTTTTTTATGAA ATTATAATATTTAAG TERM 1797 1542468 - 1542431 - f 76 -8.6 -3.5511 | opp_overlap 1542421 1542433, overlap 1542429 1542433 TTGGATTTATAAATA GACCCGTTTCTAGT ATAAAAGTTG ACTAGAAACGGGTT TTTTTATGAAATTAT TERM 1798 1542433 - 1542466 + F 100 -12.7 -5.63504 | gap 1, opp_overlap 1542431 1542429 1542433, overlap 1542421 GGATTTATAAATAGA CCCGTTTCTAGTATAA AAG TTG-ACTAGAAACGGG TTTTTTTATGAAATT TERM 1799 1542466 - 1542433 - f 85 -11.2 -3.34988 | opp_overlap 1542433 1542421, overlap 1542431 1542429 GGATTTATAAATAGA CCCGTTTCTAGT ATAAAAGTTG ACTAGAAACGGG TTTTTTTATGAAATT TERM 1800 1542630 - 1542593 - f 72 -3.3 -5.1517 | AAAAGAAATGAAAAA CACCCCCGAAATGGT ACAATGAA ACCAACAAGGGGGTG TTTATATTTGGTTAA TERM 1801 1543771 - 1543743 - f 74 -3.8 -5.28683 | opp_overlap 1543745, overlap 1543745 AGCAAGATTAAAAAA CCTGGATCTGGT GGAAT ACCAAAGCCATG CTGTTTGAAAAATAA THA_1534 1544044 - 1544643 + | fibronectin type III domain protein THA_1535 1544687 - 1544848 + | hypothetical protein THA_1536 1545160 - 1545705 + | hypothetical protein TERM 1802 1545800 - 1545820 + F 100 -14 -5.24416 | CCCATAGGGGCCCAG CGGCTGGG AAATA CCCAGCCG TTTTTGTTATGCTTA TERM 1803 1545878 - 1545856 - f 85 -8.4 -4.46072 | opp_overlap 1545859, overlap 1545859 TTGAATAAAGATAAA TAAGCCCTCA TAA CGAGGGCTTT TTTTATGCTGAAAGG TERM 1804 1545859 - 1545875 + F 100 -9.4 -5.67063 | opp_overlap 1545856 1545859 AATAAAGATAAATAA GCCCTC ATAAC GAGGGC TTTTTTTATGCTGAA TERM 1805 1545875 - 1545859 - f 93 -10.1 -4.31608 | opp_overlap 1545859, overlap 1545856 AATAAAGATAAATAA GCCCTCA TAA CGAGGGC TTTTTTTATGCTGAA THA_1537 1545903 - 1546154 + | hypothetical protein THA_1538 1546168 - 1546293 + | hypothetical protein TERM 1806 1546293 - 1546279 - f 70 -7.2 -3.63569 | TCAAGCTGGCAACAA TCAAAG TGG CTTTGA AAAAGATCAATTATG THA_1539 1546423 - 1546902 + | hypothetical protein TERM 1807 1546943 - 1546955 + F 82 -6.3 -5.09521 | opp_overlap 1546942 1546943, overlap 1546928 CACTGCTTCAATAAC TAGCA GTG TGCTA TTTTTAATTTCTTAC THA_1540 1547438 - 1547800 + | lipoprotein, putative TERM 1808 1550433 - 1550449 + F 83 -6.7 -4.77986 | opp_overlap 1550428 1550433, overlap 1550433 TGATAATGAACAAAA TAGTTAA AAA TTAACTA TTTTTAACTATTTAA TERM 1809 1550433 - 1550459 + F 75 -8.3 -3.6715 | opp_overlap 1550428 1550433, overlap 1550433 1550451 TGATAATGAACAAAA TAGTTAAAAAT TAACT ATTTTTAACTA TTTAAAATTACATAA TERM 1810 1550459 - 1550433 - f 90 -8.3 -4.81852 | opp_overlap 1550433 1550433 1550451, overlap 1550428 TGATAATGAACAAAA TAGTTAAAAAT TAACT ATTTTTAACTA TTTAAAATTACATAA THA_1542 1550554 - 1550718 + | hypothetical protein THA_1543 1552837 - 1552709 - | hypothetical protein TERM 1811 1552864 - 1552835 - G 77 -5.7 -4.93288 | opp_overlap 1552835 1552842, overlap 1552842 AATAGTTAAATAAAA CAAAAGCCCTCCA AAAA CGGAGGTTTTTTG TGTCTGCCTCTACGT TERM 1812 1552842 - 1552857 + r 88 -6.1 -5.4251 | opp_overlap 1552835 1552842, overlap 1552835 AAATAAAACAAAAGC CCTCC AAAAAC GGAGG TTTTTTGTGTCTGCC THA_1545 1553938 - 1553048 - | efflux cation efflux family protein THA_1546 1554233 - 1553931 - | transcriptional regulator, ArsR family TERM 1813 1554102 - 1554140 + g 71 -4.7 -4.79949 | AGAAACTGTAGATTG TGTAGTGTTCAAAAACT CTTGA AGTTCTGAAACACTACA TTCTTTTTTTGAAAG TERM 1814 1554162 - 1554178 + g 77 -8.1 -3.74693 | opp_overlap 1554156 1554155, overlap 1554165 TTTTGAAAGCGCAAT CAAGATT TTT AATCTTG TTTGGTCAGATAAAA TERM 1815 1554558 - 1554547 - g 86 -3 -5.85178 | AAGAGCCAAAAAAAA TTCA TATC TGAA TGTAGAAGAAATACT TERM 1816 1554824 - 1554810 - g 76 -8.6 -3.46509 | overlap 1554804 TGCCAACAATAGGAA GAACTC ATG GAGTTC ATGCTGAACCAACTT purB 1554395 - 1555672 + | adenylosuccinate lyase TERM 1817 1555665 - 1555712 + T 100 -14.5 -4.51378 | opp_overlap 1555673 1555678, overlap 1555678 TAATTTATGAAAGAT TTAAATAACAAAATCCCCGGT TTTAAC ACCGGGGATTTTTTTGTTTGA TTTTATAATATCGCT TERM 1818 1555704 - 1555673 - T 100 -11.7 -4.02707 | opp_overlap 1555665 1555678, overlap 1555678 GAAAGATTTAAATAA CAAAATCCCCGGT TTTAAC ACCGGGGATTTTT TTGTTTGATTTTATA TERM 1819 1555678 - 1555699 + T 100 -11.6 -6.01187 | opp_overlap 1555673 1555678, overlap 1555665 ATTTAAATAACAAAA TCCCCGGT TTTAAC ACCGGGGA TTTTTTTGTTTGATT TERM 1820 1555699 - 1555678 - T 100 -11.6 -5.011 | opp_overlap 1555678 1555665, overlap 1555673 ATTTAAATAACAAAA TCCCCGGT TTTAAC ACCGGGGA TTTTTTTGTTTGATT THA_1548 1556818 - 1555715 - | sugar ABC transporter, ATP-binding protein THA_1549 1557091 - 1556831 - | prevent-host-death family protein, putative TERM 1821 1557106 - 1557123 + H 100 -7.1 -5.40072 | opp_overlap 1557120 AATACAATCCCTCCT TGACTAT AATT ATAGTCA TTTTTTTAGAAAAAA THA_1550 1557236 - 1558684 + | radical SAM domain protein TERM 1822 1558714 - 1558685 - f 95 -12.2 -3.57441 | opp_overlap 1558690 1558704 1558706 AAGTTAGAATTATAA TTAACGCGGGGG TTATTT CCCCCGCTTTAA GAGGTGTATTAATGG TERM 1823 1558690 - 1558709 + F 95 -12.1 -3.57387 | opp_overlap 1558685, overlap 1558704 1558706 AGAATTATAATTAAC GCGGGGG TTATTT CCCCCGC TTTAAGAGGTGTATT THA_1551 1558726 - 1559280 + | transcriptional regulator, TetR family rpmE 1559354 - 1559563 + | ribosomal protein L31 THA_1553 1559632 - 1560006 + | polyribonucleotide nucleotidyltransferase TERM 1824 1560009 - 1560037 + T 100 -14.7 -5.10208 | opp_overlap 1560014, overlap 1560014 AGAAAGAAGATAATT AAAAACGCCCACT TAA AGTGGGCGTTTTG TTTTTATTAACATTA TERM 1825 1560032 - 1560014 - T 100 -14.6 -4.99056 | opp_overlap 1560014 1560009 GAAGATAATTAAAAA CGCCCACT TAA AGTGGGCG TTTTGTTTTTATTAA TERM 1826 1560014 - 1560032 + T 100 -14.6 -5.42605 | opp_overlap 1560014, overlap 1560009 GAAGATAATTAAAAA CGCCCACT TAA AGTGGGCG TTTTGTTTTTATTAA THA_1554 1561674 - 1560061 - | NADP-reducing hydrogenase, subunit c THA_1555 1562159 - 1561671 - | Fe-hydrogenase gamma subunit TERM 1827 1561830 - 1561843 + g 70 -3.9 -5.03201 | overlap 1561834 ACCATCACTCGTTGT TTGAT TAAA ATCAA TTTTTAATTCTTCTT THA_1556 1563996 - 1562188 - | NADP-reducing hydrogenase, subunit c TERM 1828 1563437 - 1563447 + g 70 -5.4 -4.65747 | overlap 1563435 ATCATATATTTTTCA TCAC CTG GTGA TTTTCTTGCAAATTC THA_1558 1564735 - 1564361 - | NADP-reducing hydrogenase, subunit b TERM 1829 1564673 - 1564688 + g 75 -4.8 -5.08483 | TTCTTCACGCATTTT TACATT TTTT AATGTA TTTTCTTTGATTTTC THA_1559 1565229 - 1564738 - | Fe-hydrogenase gamma subunit TERM 1830 1565370 - 1565390 + r 90 -9.7 -4.24123 | opp_overlap 1565370 TGAACATATTAAAAA TCCCCCG TTAAATT CGGGGGA TTTTGGGCTTATTCA TERM 1831 1565390 - 1565370 - R 100 -9.7 -4.87807 | opp_overlap 1565370 TGAACATATTAAAAA TCCCCCG TTAAATT CGGGGGA TTTTGGGCTTATTCA ftcD 1566304 - 1565399 - | glutamate formiminotransferase THA_1561 1567068 - 1566301 - | inositol-1-monophosphatase THA_1562 1568677 - 1567061 - | penicillin-binding protein 2 gltX2 1570061 - 1568667 - | glutamyl-tRNA synthetase TERM 1832 1568820 - 1568841 + g 88 -8.9 -4.36433 | TACTCTTTTGGTTCC TATTTCAAG TTCA CTTGAAATA TTTCTTAGTGTTTCC TERM 1833 1569660 - 1569678 + g 71 -3.2 -5.18866 | opp_overlap 1569660, overlap 1569673 TTTTGTAACCTTAAA TTTTACAA CAA TTGAAAAA TTTTCTTTATTTGCA TERM 1834 1569748 - 1569758 + g 91 -5.4 -5.87688 | TGGCCGTGATAGACT GCAT AAT ATGC TTTTTTTTCGCTTAT TERM 1835 1570036 - 1570026 - G 70 -8.2 -3.16071 | overlap 1570024 TCCGACATGAAGATA GCCC GTA GGGC TTGGGGCAAATCTTA THA_1564 1570583 - 1570074 - | hypothetical protein TERM 1836 1570271 - 1570287 + g 81 -4.5 -5.46706 | ATAGTATTGATTGCT GAGAATA AAG TATTTTC TTTTTATTTTGCAAT THA_1565 1571246 - 1570587 - | translation initiation factor, eIF-2B alpha subunit-related TERM 1837 1571111 - 1571123 + g 71 -4.8 -4.74012 | opp_overlap 1571111 ATATCCATTTAATAA CCTG CATTT CAGG TTTTAATTTTATCAT THA_1566 1572133 - 1571243 - | oxygen-independent coproporphyrinogen III oxidase THA_1567 1572636 - 1572199 - | GatB/Yqey rpiB 1573086 - 1572649 - | ribose 5-phosphate isomerase B THA_1569 1573438 - 1573100 - | anti-anti-sigma regulatory factor lexA 1574048 - 1573452 - | LexA repressor THA_1571 1574422 - 1574045 - | hypothetical protein gyrA 1576835 - 1574415 - | DNA gyrase, A subunit metG 1578765 - 1576849 - | methionyl-tRNA synthetase TERM 1838 1578102 - 1578078 - G 78 -9.4 -3.30452 | opp_overlap 1578077, overlap 1578071 TAATAAGAGCATCAA CCCAAACATA AATAA CATGTTTGGG GTCATTCGGCATTGG TERM 1839 1578105 - 1578134 + g 77 -7.9 -4.13244 | gap 1, opp_overlap 1578071 TAACATGTTTGGGGT CATTCGGCATTGGG ATA CCCCA-GTCGAATG TTGTTCTTGTTATAG TERM 1840 1580103 - 1580121 + G 74 -6.8 -4.25401 | AGAGAACCTGATCCA TTCTTTGG ATA TCAAAGAA TTTATCTTGACTTTA THA_1574 1579050 - 1580300 + | lactose-binding protein TERM 1841 1580332 - 1580310 - f 77 -9.1 -3.21904 | opp_overlap 1580311, overlap 1580309 1580311 TATTAAAGTTAAAAT TTGGGTGGG CCGCT CCCACCCAT TTTTCTGCACCAAGG TERM 1842 1580311 - 1580331 + F 100 -12.6 -4.82901 | opp_overlap 1580311 1580310 1580309 ATTAAAGTTAAAATT TGGGTGGG CCGCT CCCACCCA TTTTTCTGCACCAAG TERM 1843 1580331 - 1580311 - f 89 -12.6 -2.52419 | opp_overlap 1580311, overlap 1580310 1580309 ATTAAAGTTAAAATT TGGGTGGG CCGCT CCCACCCA TTTTTCTGCACCAAG THA_1575 1580357 - 1581250 + | lactose transport system TERM 1844 1581667 - 1581682 + G 78 -3.2 -5.6473 | overlap 1581669 1581671 TGGGGAATTATTTTA CCGATG ATTC CATCAG TTTTTTTAATCTTCT THA_1576 1581247 - 1582059 + | lactose transport system THA_1577 1582077 - 1583075 + | transcriptional regulator, LacI family TERM 1845 1584950 - 1584929 - g 70 -5.3 -4.66163 | ATTTTTATTTAAAAA CAAATTTAT GTTT ACAAATTTG GAAAATTATAAAGGA THA_1578 1583088 - 1586366 + | beta-galactosidase TERM 1846 1586632 - 1586642 + G 70 -4 -4.95167 | ATTATAGAAGACGAC GAAA ATA TTTC TTTTGTTATTAATTA TERM 1847 1586771 - 1586751 - g 82 -6.3 -5.186 | TAAAACATATAAAAA TTTAATTGA AAG TCAACTAAA AAGTAAAAAAAGTCA TERM 1848 1586935 - 1586919 - g 77 -8.1 -3.85184 | TTTAAAAGATTTAAA TTGCAAA ATA TTTGCAA GATCAAAAAATTATC THA_1579 1586380 - 1587303 + | alpha-galactosidase, putative galT2 1587303 - 1588259 + | galactose-1-phosphate uridylyltransferase galK 1588256 - 1589314 + | galactokinase TERM 1849 1589339 - 1589312 - T 100 -17.2 -4.04579 | opp_overlap 1589312 1589316, overlap 1589316 GTTACAAAGATTAAA TAAAGTGCCTGG ATAT CCAGGCACTTTA TTAATTAGATATTCC TERM 1850 1589312 - 1589339 + T 100 -17.2 -3.406 | opp_overlap 1589312 1589316, overlap 1589316 GTTACAAAGATTAAA TAAAGTGCCTGG ATAT CCAGGCACTTTA TTAATTAGATATTCC TERM 1851 1589335 - 1589316 - T 100 -13.6 -4.59293 | opp_overlap 1589312 1589316, overlap 1589312 CAAAGATTAAATAAA GTGCCTGG ATAT CCAGGCAC TTTATTAATTAGATA TERM 1852 1589316 - 1589335 + T 100 -13.6 -4.33621 | opp_overlap 1589316 1589312, overlap 1589312 CAAAGATTAAATAAA GTGCCTGG ATAT CCAGGCAC TTTATTAATTAGATA pyrBI 1590921 - 1589344 - | pyrimidine base biosynthetic protein TERM 1853 1590984 - 1590962 - R 100 -15 -5.50925 | opp_overlap 1590962 AATGAATATAAAAAA GAGCCAACTT TAA AAGTTGGCTC TTTATGCAATGGAAA TERM 1854 1590962 - 1590984 + r 100 -15 -3.89346 | opp_overlap 1590962 AATGAATATAAAAAA GAGCCAACTT TAA AAGTTGGCTC TTTATGCAATGGAAA THA_1583 1592017 - 1590986 - | hdig domain protein THA_1584 1592275 - 1592685 + | iron uptake regulatory protein THA_1585 1592688 - 1593332 + | peroxidase TERM 1855 1593364 - 1593385 + F 86 -11.5 -2.53392 | opp_overlap 1593359, overlap 1593378 1593380 1593381 ATATATAGGACTTGT AGGAGCGGG CGCA CCCGCTCCA TAAATTAGAAAATTT THA_1586 1593417 - 1593575 + | rubredoxin TERM 1856 1593868 - 1593858 - g 70 -4 -4.86033 | AAAGTTGTAGAAAAA TTTG GAG CAAA GGTTGTTACAAATAA TERM 1857 1594474 - 1594491 + G 72 -6.3 -4.23723 | overlap 1594475 AAGCATCAACAGTTG TCATTGG AACA CCAATGG TTTTAACTGGTGTTC THA_1587 1593579 - 1594745 + | nitric oxide reductase THA_1588 1594760 - 1595278 + | ferritin THA_1589 1595280 - 1595459 + | HTH domain superfamily TERM 1858 1595688 - 1595662 - g 72 -6.6 -4.09511 | AAGAGTTGGGGAAAA TGCTCTTCATCC TAT GGAAGAAAAACA CTATATAGAATGGAT THA_1590 1595462 - 1595842 + | desulfoferrodoxin TERM 1859 1595888 - 1595859 - T 87 -7.8 -4.77757 | opp_overlap 1595862, overlap 1595860 1595862 TTTTAAAAATTAAAA TTATCCCCCAGC TAATTT GCTGGGGGATTT TGTTTTACCAATTAA TERM 1860 1595887 - 1595860 - T 90 -11.3 -3.4557 | opp_overlap 1595862, overlap 1595859 1595862 TTTAAAAATTAAAAT TATCCCCCAGC TAATTT GCTGGGGGATT TTGTTTTACCAATTA TERM 1861 1595862 - 1595885 + T 100 -13.9 -5.08255 | opp_overlap 1595862 1595860 1595859 TAAAAATTAAAATTA TCCCCCAGC TAATTT GCTGGGGGA TTTTGTTTTACCAAT TERM 1862 1595885 - 1595862 - T 100 -13.9 -3.28005 | opp_overlap 1595862, overlap 1595860 1595859 TAAAAATTAAAATTA TCCCCCAGC TAATTT GCTGGGGGA TTTTGTTTTACCAAT THA_1591 1597209 - 1595893 - | hypothetical protein THA_1592 1598312 - 1597206 - | general secretion pathway protein D, putative THA_1593 1599727 - 1598309 - | hypothetical protein TERM 1863 1599820 - 1599844 + r 95 -12.3 -3.72363 | opp_overlap 1599820 1599838, overlap 1599840 GTTAAGTTCAAAAAA TCCCATATACT CAA GGTATATGGGA TTTCCCATTTAGATG TERM 1864 1599844 - 1599820 - R 100 -11.6 -5.09426 | opp_overlap 1599820 1599840, overlap 1599838 GTTAAGTTCAAAAAA TCCCATATAC TCAAG GTATATGGGA TTTCCCATTTAGATG THA_1594 1600331 - 1599870 - | hypothetical protein THA_1595 1602013 - 1601849 - | hypothetical protein TERM 1865 1602108 - 1602134 + r 90 -8.3 -4.81852 | opp_overlap 1602101 1602108 1602118, overlap 1602113 TTATGTAATTTTAAA TAGTTAAAAAT AGTTA ATTTTTAACTA TTTTGTTCATTATCA TERM 1866 1602134 - 1602108 - R 75 -8.3 -3.6715 | opp_overlap 1602108 1602113, overlap 1602101 1602118 TTATGTAATTTTAAA TAGTTAAAAAT AGTTA ATTTTTAACTA TTTTGTTCATTATCA TERM 1867 1602134 - 1602118 - R 83 -6.7 -4.77986 | opp_overlap 1602108 1602113, overlap 1602108 TTAAATAGTTAAAAA TAGTTAA TTT TTAACTA TTTTGTTCATTATCA THA_1596 1604183 - 1603602 - | hypothetical protein THA_1597 1604680 - 1604210 - | hypothetical protein TERM 1868 1604751 - 1604722 - R 77 -8.7 -3.66018 | opp_overlap 1604720 1604722 GTAGCATTTTAAGAA TCCAAGTAGTCAA AGTT TAAACTACTTGGA TATGTTTTAGTTATC THA_1598 1605229 - 1604768 - | hypothetical protein THA_1599 1605439 - 1606296 + | hypothetical protein queD 1606317 - 1606679 + | queuosine biosynthesis protein QueD THA_1601 1608162 - 1606681 - | TRK system potassium uptake protein TrkH TERM 1869 1607197 - 1607183 - G 74 -7.2 -3.93984 | AAATTGATCCATAAA GGATTT GTC AAATCC ACTGTTGAAAAACCT TERM 1870 1607328 - 1607353 + g 72 -4.7 -5.00616 | overlap 1607330 AAAAAGTAAATATTG TTGTGAGCATT AACC AAGGCTCACCA TTTTTTAAGAAAGCC TERM 1871 1608201 - 1608184 - R 70 -7.1 -3.745 | TCACCCATTAAAATA TCAAGAA TTTG TTCTTGA GCTGTTGGTAAACTT THA_1602 1608824 - 1608165 - | TRK system potassium uptake protein TrkA THA_1603 1609246 - 1608821 - | TrkA-related protein THA_1604 1609832 - 1609230 - | response regulatory protein TERM 1872 1609878 - 1609858 - R 100 -12.6 -5.45802 | opp_overlap 1609858 CCTGTAAAAGAAAAA CTAGGGGG ACTCA CCCCCTAG TTCTATATTATATCA TERM 1873 1609858 - 1609878 + r 95 -12.6 -3.74975 | opp_overlap 1609858 CCTGTAAAAGAAAAA CTAGGGGG ACTCA CCCCCTAG TTCTATATTATATCA tpiA 1610608 - 1609886 - | triose-phosphate isomerase THA_1606 1611837 - 1610629 - | pgk phosphoglycerate kinase TERM 1874 1611886 - 1611867 - R 87 -10.7 -3.68222 | opp_overlap 1611867 TGTTAATTTTAATAA TGGGGGC AACAGA GCCCCCA TTTACGAAAAAAGAT TERM 1875 1611867 - 1611886 + r 85 -10.7 -3.53091 | opp_overlap 1611867 TGTTAATTTTAATAA TGGGGGC AACAGA GCCCCCA TTTACGAAAAAAGAT THA_1607 1612909 - 1611911 - | gap glyceraldehyde-3-phosphate dehydrogenase, type I THA_1608 1613718 - 1613002 - | hypothetical protein TERM 1876 1613300 - 1613322 + g 71 -7.8 -3.48115 | overlap 1613298 GTTACTTTTAATTTG TCTGTTTTTC CAG GAACAACAGA TGTGTTTTGTGAAAG TERM 1877 1613686 - 1613676 - G 75 -4 -5.20781 | TATCAGAAAATAAAA TACA GGA TGTA ATTACAAAAAGAATT THA_1609 1615099 - 1613735 - | hypothetical protein fliI 1616430 - 1615126 - | flagellar protein export ATPase FliI TERM 1878 1615796 - 1615812 + g 81 -3.7 -5.54264 | GATACAACAACAACT GAACGTT TTA AACCTTC TTTTTTTAGATCTTT THA_1611 1617118 - 1616423 - | flagellar export/assembly protein TERM 1879 1617162 - 1617138 - R 82 -8.6 -4.09511 | gap 1, overlap 1617127 1617125 1617140 AACACCTCTTGAAAA GAGACTGGTGC AAAA GCACCAGCC-C AGATAATTAATATTC TERM 1880 1617161 - 1617140 - R 95 -12.3 -3.6422 | overlap 1617127 1617125 1617138 CACCTCTTGAAAAGA GACTGGTGC AAAA GCACCAGCC CAGATAATTAATATT ackA 1618389 - 1617169 - | acetate kinase THA_1613 1619349 - 1618411 - | fba fructose-1,6-bisphosphate aldolase, class II TERM 1881 1619592 - 1619612 + H 80 -6.1 -4.87592 | TCTTACCTCACCGTT CCACCCTTA CCA TAGTGGTGG TTTTCTTCTCTATGG THA_1614 1619766 - 1620263 + | hypothetical protein TERM 1882 1620840 - 1620854 + G 70 -5.7 -4.27686 | opp_overlap 1620838 1620837, overlap 1620837 ATATTTCACCAATTT CAGCT GCTGA AGCTG TTTTGACTAGTTTTG TERM 1883 1621028 - 1621014 - g 72 -4.3 -5.02231 | CAAAAATATTAAAAA CTTCA ATTTA TGAAG CAGAAAGGCTATTGA TERM 1884 1621103 - 1621076 - g 71 -7.8 -3.40175 | opp_overlap 1621074 1621076, overlap 1621074 1621072 ATTTTTCAAAATATA GAGCCTTCTATT ATAG AATATAAGGCCC TTGATGGAAGAACAA ftsA 1620269 - 1621531 + | cell division protein FtsA ftsZ 1621535 - 1622590 + | cell division protein FtsZ THA_1617 1622571 - 1624268 + | general secretion pathway protein E THA_1618 1624258 - 1625400 + | hypothetical protein THA_1619 1625446 - 1626003 + | frr ribosome recycling factor TERM 1885 1626121 - 1626155 + G 76 -6.4 -4.54477 | overlap 1626137 TTGAGGAAGTAGTGA GGTGGTGTGCTGAGTA TGG TGTAAAGTACACCACC TTTTATGCATTTTCA TERM 1886 1626137 - 1626153 + G 73 -9.5 -2.57876 | overlap 1626121 GTGGTGTGCTGAGTA TGGTGTA AAG TACACCA CCTTTTATGCATTTT uppS 1626006 - 1626683 + | undecaprenyl diphosphate synthase TERM 1887 1627080 - 1627094 + G 74 -6.4 -4.37198 | TGTATAAGTTTTATG GTGCAG CTG TTGCAC TTTTAACTTTGACTT cdsA 1626680 - 1627492 + | phosphatidate cytidylyltransferase TERM 1888 1627981 - 1627994 + G 72 -8.1 -3.31792 | TTCTGGGGGCCTGCT GGTCC TACA GGACC TTGTGGACCTGATAC TERM 1889 1628452 - 1628465 + G 70 -3.7 -5.10497 | CATGGAAAATTGTTG GGGGC AAAT GCACC TTTTTTACATAAATT alaS 1627510 - 1630089 + | alanyl-tRNA synthetase TERM 1890 1631017 - 1631005 - g 74 -6.3 -4.37337 | AGAAACAGGAATAAA TGCAA TTG TTGCA GATGAGCCGATGACA THA_1623 1630091 - 1631104 + | Rod shape-determining protein MreB TERM 1891 1631409 - 1631399 - g 81 -2.6 -5.69473 | CAGATGATAAAAAAA TATT AGG AATA GCAAGAAAAACCGGA THA_1624 1631101 - 1631736 + | hypothetical protein THA_1625 1631729 - 1632322 + | ggdef domain protein TERM 1892 1633121 - 1633094 - g 70 -6.4 -4.07595 | ATATAGAGGAAATAA TCCCAGAACATT TGGA AATATTATGGGA AATTCTTAAAGAAAC murA 1632334 - 1633581 + | UDP-N-acetylglucosamine 1-carboxyvinyltransferase TERM 1893 1633787 - 1633809 + G 88 -9.4 -4.07568 | overlap 1633790 AGTTTGGAGATACGC TAATCAAAAA GAT TTTTTGATTA TTTTCAGAGGAACAC TERM 1894 1633790 - 1633806 + G 72 -6.7 -4.17048 | overlap 1633787 TTGGAGATACGCTAA TCAAAAA GAT TTTTTGA TTATTTTCAGAGGAA TERM 1895 1634205 - 1634185 - g 74 -7.7 -3.83844 | TTGATGAATTAATAA TTGCAATTC CTG GAATTACAA GTAATAAGGTAAATC TERM 1896 1635274 - 1635301 + G 70 -5 -4.54727 | opp_overlap 1635274 AAATAAAGAAAAATT CTCTTGAAATTT TAGA AAATTTGAAGGG TTTTAATTTCGAAAA THA_1627 1633593 - 1635377 + | putative epimerase/dehydratase WbiI THA_1628 1635374 - 1635883 + | hypothetical protein THA_1629 1635880 - 1636158 + | hypothetical protein TERM 1897 1636814 - 1636794 - g 77 -5.5 -4.93333 | opp_overlap 1636794 1636799 1636804 1636806 1636808, overlap 1636808 AATTAAAAGATAAAA TTGAAGAAT TGA AATCTTCAA TGATTGAAGATATAG TERM 1898 1636824 - 1636808 - g 77 -8.1 -3.8579 | opp_overlap 1636794 1636806 1636804 1636799 1636808, overlap 1636794 ATTGAAGAATTGAAA TCTTCAA TGA TTGAAGA TATAGTTTCTCTTGA TERM 1899 1636808 - 1636824 + G 70 -8.1 -3.10881 | opp_overlap 1636794 1636808, overlap 1636794 1636806 1636804 1636799 ATTGAAGAATTGAAA TCTTCAA TGA TTGAAGA TATAGTTTCTCTTGA fusA2 1636208 - 1638265 + | translation elongation factor G TERM 1900 1638309 - 1638288 - f 100 -14.5 -4.89009 | opp_overlap 1638288 ATATGTAAGTAAAAA TGAGGCGCA ACTA TGCGCCTCA TTTTTTTAAGGAAAA TERM 1901 1638288 - 1638309 + F 100 -14.5 -5.40072 | opp_overlap 1638288 ATATGTAAGTAAAAA TGAGGCGCA ACTA TGCGCCTCA TTTTTTTAAGGAAAA TERM 1902 1638564 - 1638554 - g 70 -5.4 -4.60041 | ACTTATTGTCAAAAA TACC ATT GGTA AATAAATTTGTTAAA THA_1631 1638379 - 1639326 + | hypothetical protein TERM 1903 1639741 - 1639725 - gf 70 -3.8 -5.1101 | CTATCATTGAAAAAA TTAGAA GAAAA TTCTAA ACTAAGTGATAAAGA TERM 1904 1641029 - 1641016 - gf 74 -3.9 -5.22137 | AACGAGAAAATAAAA TTTCA AAAT TGAAA AGTGAATTTAGTGAT THA_1632 1639323 - 1641584 + | hypothetical protein THA_1633 1641559 - 1642227 + | basal-body rod modification protein FlgD THA_1634 1642233 - 1644347 + | flagellar hook protein FlgE THA_1635 1644358 - 1644579 + | hypothetical protein THA_1636 1644579 - 1645367 + | motility protein A THA_1637 1645370 - 1646236 + | motility protein B fliL 1646248 - 1646772 + | flagellar basal body-associated protein FliL fliM 1646786 - 1647775 + | flagellar motor switch protein FliM THA_1640 1647775 - 1648872 + | flagellar motor switch phosphatase FliY TERM 1905 1648959 - 1648921 - T 90 -4.7 -5.72053 | gap 2, opp_overlap 1648921 GAACGAAATAAAAAA CACCCCC-GGA-AGTGATA AAA TATAACTATCTAGGGGGTG TTTTTCATTGGCAAA TERM 1906 1648921 - 1648959 + T 83 -6.9 -4.8622 | gap 2, opp_overlap 1648921 GAACGAAATAAAAAA CACCCCC-GGA-AGTGATA AAA TATAACTATCTAGGGGGTG TTTTTCATTGGCAAA TERM 1907 1649060 - 1649047 - T 71 -5.3 -4.67982 | opp_overlap 1649047 TTTCATTGAAGAAAA TCTTC CTAA GAAGA CTATTGCTTCTCTTT TERM 1908 1650061 - 1650089 + T 77 -8.1 -3.91984 | opp_overlap 1650061 GGCAAGGTTAAAAAA CATGGCTCCGGTG GAA TACCGAAACCATG TTGTTTGAAAAGTGT TERM 1909 1650089 - 1650061 - T 100 -11.8 -5.09426 | opp_overlap 1650061 GGCAAGGTTAAAAAA CATGGCTCCGGT GGAAT ACCGAAACCATG TTGTTTGAAAAGTGT THA_1641 1651152 - 1650166 - | ATPase family associated with various cellular activities (AAA) protein TERM 1910 1650391 - 1650367 - G 72 -2.9 -5.46629 | opp_overlap 1650367, overlap 1650368 AAGATTTGAAAAAAA GTCAATTATTC TTA GAATTATTGAA TTAGCTTCATGTAGT THA_1642 1651684 - 1651139 - | hypothetical protein scpA 1652341 - 1651688 - | segregation and condensation protein A THA_1644 1652943 - 1652341 - | CBS domain pair protein THA_1645 1653915 - 1652980 - | hypothetical protein coaB 1655044 - 1653878 - | C phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase panB 1655843 - 1655046 - | 3-methyl-2-oxobutanoate hydroxymethyltransferase TERM 1911 1655884 - 1655909 + r 100 -12 -5.19261 | opp_overlap 1655865 1655884 TTTTAACATAAAAAA TACCCTCTAG TTTCTC CTAGAGGGTA TTTTTTAATAAATTT TERM 1912 1655909 - 1655884 - R 100 -12 -5.47159 | opp_overlap 1655884, overlap 1655865 TTTTAACATAAAAAA TACCCTCTAG TTTCTC CTAGAGGGTA TTTTTTAATAAATTT THA_1648 1656646 - 1655900 - | dehydrase-related protein THA_1649 1656713 - 1657681 + | polysaccharide pyruvyl transferase superfamily THA_1650 1658442 - 1657678 - | hemin transport system ATP-binding protein HmuV TERM 1913 1658071 - 1658087 + g 75 -4.5 -5.12971 | TAAGAGTTCAACCAT TGAAAGA CAT TCTTTTA TTTTTGTTGAATCTT THA_1651 1658962 - 1658426 - | transglycosylase SLT domain protein THA_1652 1659317 - 1658973 - | YuiD THA_1653 1659737 - 1659330 - | serine phosphatase RsbU THA_1654 1660477 - 1659737 - | ncharacterized conserved protein TERM 1914 1659881 - 1659899 + g 79 -5.4 -5.33124 | overlap 1659887 1659895 TATCTCGATAAAGTT TTTTGAGA AAA TTTCAAAA TTTTCTTTTGTTATT TERM 1915 1659887 - 1659904 + g 77 -5.7 -4.92757 | overlap 1659881 1659895 GATAAAGTTTTTTGA GAAAATT TCAA AATTTTC TTTTGTTATTACTAA TERM 1916 1659956 - 1659966 + g 91 -4 -6.11019 | ATTAGTTATTCCATA TTCT TTT AGAA TTTTTTTTGATTTTT TERM 1917 1659973 - 1659984 + g 74 -3 -5.48163 | CTTTTAGAATTTTTT TTGA TTTT TCAA TTTTTTCCTTTCTTT TERM 1918 1660507 - 1660492 - R 72 -9 -2.60054 | overlap 1660484 TATGAAAGTATGAAG GCACCA AATC TGGTGC GCAACATACGTGAAG THA_1655 1660978 - 1660529 - | dtd D-tyrosyl-tRNA(Tyr) deacylase TERM 1919 1660784 - 1660794 + g 70 -4 -4.88222 | opp_overlap 1660784 ATTTATATCAAGCAA TGAA AGG TTCA TTTTTCCATTTTCAT THA_1656 1663101 - 1660975 - | GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase)(ppGpp synthetase I) ((P)ppGpp synthetase) TERM 1920 1661631 - 1661643 + g 81 -2.7 -5.77734 | TAATAACATCTTTTC CTGAT TCA ATTAG TTTTTCTTTTTCTTT TERM 1921 1663159 - 1663176 + H 74 -7.1 -4.00684 | ATTTTGCAAAGTGTG TTCCAAT AGCT ATTGGAA TTGTTAATTTTGTAT THA_1657 1663324 - 1664955 + | lipoprotein, putative THA_1658 1664975 - 1666405 + | probable subtilase-type serine protease THA_1659 1666723 - 1666995 + | fervidolysin TERM 1922 1667021 - 1667046 + T 100 -16.3 -5.39221 | opp_overlap 1667021 TTTACAAAATATAAA TCAAGCCTCCA ATTT TGGAGGCTTGA TTTTTTAATTATTAT TERM 1923 1667046 - 1667021 - T 100 -16.3 -4.51238 | opp_overlap 1667021 TTTACAAAATATAAA TCAAGCCTCCA ATTT TGGAGGCTTGA TTTTTTAATTATTAT TERM 1924 1667190 - 1667228 + T 83 -6.9 -4.8622 | gap 2, opp_overlap 1667190 GAACGAAATAAAAAA CACCCCC-GGA-AGTGATA AAA TATAACTATCTAGGGGGTG TTTTTCATTGGCAAA TERM 1925 1667228 - 1667190 - T 90 -4.7 -5.72053 | gap 2, opp_overlap 1667190 GAACGAAATAAAAAA CACCCCC-GGA-AGTGATA AAA TATAACTATCTAGGGGGTG TTTTTCATTGGCAAA TERM 1926 1667329 - 1667316 - T 71 -5.3 -4.67982 | opp_overlap 1667316 TTTCATTGAAGAAAA TCTTC CTAA GAAGA CTATTGCTTCTCTTT TERM 1927 1668329 - 1668357 + T 77 -8.1 -3.91984 | opp_overlap 1668329 GGCAAGGTTAAAAAA CATGGCTCCGGTG GAA TACCGAAACCATG TTGTTTGAAAAGTGT TERM 1928 1668357 - 1668329 - T 100 -11.8 -5.09426 | opp_overlap 1668329 GGCAAGGTTAAAAAA CATGGCTCCGGT GGAAT ACCGAAACCATG TTGTTTGAAAAGTGT THA_1660 1670685 - 1668394 - | probable hypoxanthine oxidase XdhD TERM 1929 1669337 - 1669347 + g 75 -4 -5.29846 | overlap 1669341 GTTTCAGATATTTTT TTTC TTG GAAA TTTTTCTTTCCAATT THA_1661 1671128 - 1670682 - | xanthine dehydrogenase iron-sulfur binding subunit TERM 1930 1670780 - 1670793 + g 81 -3.9 -5.61881 | overlap 1670789 TGTTTGTTATTTCCT CTTTA TCTT TAAAG TTTTTATTTTTAAGA THA_1662 1671913 - 1671125 - | putative FAD-binding subunit of oxidoreductase TERM 1931 1671228 - 1671244 + g 85 -8 -4.80396 | AATTTTAATTCTTCG GCTGCA ATTTC TGCAGC TTTTTCAATATTTTC TERM 1932 1671580 - 1671618 + g 77 -8.3 -3.794 | opp_overlap 1671589 CAGAAAAACCGTATT TGGGAAAAATAGTCCCT CCAAC AGTGACTATGTTTCTCA TTTGATAACTTAAAA THA_1663 1672752 - 1671910 - | medium FAD-binding subunit of molybdenum enzyme THA_1664 1673209 - 1672745 - | 2Fe-2S iron-sulfur cluster binding domain protein TERM 1933 1672773 - 1672785 + g 76 -6.3 -4.59853 | opp_overlap 1672782 TCACTTCCTTTGATA TAGCT AGA AGCTA TTTTTACAGCATTAA thrC 1674417 - 1673206 - | threonine synthase TERM 1934 1673403 - 1673378 - G 76 -9.7 -2.72263 | opp_overlap 1673378, overlap 1673377 ATAGCTTTTTTAAAG CCTGCATATGC AGCA GCACCTGCAGG TTCTGCGAAAATACC THA_1666 1674590 - 1675135 + | metal dependent phosphohydrolase TERM 1935 1675153 - 1675164 + G 91 -4.4 -6.11019 | TCAGGTTTGTTTTTT TGGA TATT TCCA TTTTTTTTAATTTTT THA_1667 1675132 - 1675536 + | hypothetical protein TERM 1936 1676293 - 1676305 + G 70 -6.3 -4.15703 | opp_overlap 1676292 TCACAGAAAATTAGG TCCAA AAC TTGGA TTATTCTTTATAAAC thrS 1675550 - 1677460 + | threonyl-tRNA synthetase THA_1669 1677465 - 1678277 + | two-component response regulator variant THA_1670 1678376 - 1678720 + | nodulation efficiency protein D (NfeD) THA_1671 1678725 - 1679642 + | band 7/Mec-2 family protein TERM 1937 1679665 - 1679686 + G 79 -7.9 -4.23794 | opp_overlap 1679668, overlap 1679666 TTTTTTACGCTTATT ACAGGGGCC GTAG GGCTCCTGA TTTCTATTGCATTAG TERM 1938 1679666 - 1679685 + G 91 -11.4 -3.13553 | opp_overlap 1679668, overlap 1679665 TTTTTACGCTTATTA CAGGGGCC GTAG GGCTCCTG ATTTCTATTGCATTA THA_1672 1679635 - 1680114 + | hypothetical protein TERM 1939 1680191 - 1680218 + G 78 -4.2 -5.40474 | opp_overlap 1680198, overlap 1680198 TACTTGTCTTTTTAT TTGTAAACTCCT ATAT GGGAGTTTCTAA TTTTTTTAAGACACT THA_1673 1680130 - 1681257 + | hypothetical protein THA_1674 1681382 - 1682545 + | ornithine decarboxylase TERM 1940 1682674 - 1682693 + F 82 -4.9 -5.47159 | overlap 1682675 CCGCCCTCGGCACCA GTCCCGG TAATAT CCGGGAA TTTTTTGTATTAGAA TERM 1941 1682675 - 1682692 + F 77 -8.4 -3.87211 | overlap 1682674 CGCCCTCGGCACCAG TCCCGG TAATAT CCGGGA ATTTTTTGTATTAGA THA_1676 1682729 - 1683445 + | lipopolysaccharide biosynthesis protein, putative gidB 1683442 - 1684080 + | methyltransferase GidB trmE 1684095 - 1685420 + | tRNA modification GTPase TrmE TERM 1942 1685450 - 1685427 - T 86 -3 -6.23545 | overlap 1685429 GGTAAATAAAAAAAA CACGGGCC TTTTTCTT GGCCCGCT CAAAGCTGTGGGGGG TERM 1943 1685448 - 1685429 - T 87 -7.8 -4.74858 | overlap 1685427 TAAATAAAAAAAACA CGGGCC TTTTTCTT GGCCCG CTCAAAGCTGTGGGG THA_1679 1686349 - 1685675 - | hypothetical protein TERM 1944 1687097 - 1687115 + G 83 -10.3 -3.47751 | opp_overlap 1687097 GCCGGAATAAAAAAA GGCCATC CAGCT GATGGCC TTATCAATTATTCAC TERM 1945 1687115 - 1687097 - g 100 -10.3 -5.7946 | opp_overlap 1687097 GCCGGAATAAAAAAA GGCCATC CAGCT GATGGCC TTATCAATTATTCAC THA_1680 1686416 - 1687192 + | Bax protein TERM 1946 1687210 - 1687232 + T 72 -5 -4.8048 | CATATATATTTTCTC TGTTTTTAAA ATT TTTTAAAACA TTTTTAGTGTCAAAA THA_1681 1688494 - 1687187 - | lipopolysaccharide biosynthesis protein TERM 1947 1688264 - 1688274 + g 83 -6.8 -5.15969 | GTCAAAATTGGTAGT GGCT CTA AGCC TTTTTTCACTTACGA TERM 1948 1688509 - 1688525 + r 71 -8.1 -3.25668 | overlap 1688507 TACTCTCCCCCTCCG TTCATTC AGT GAATGAA TATTCTGACTAAATT TERM 1949 1688570 - 1688613 + r 93 -8.2 -5.18357 | opp_overlap 1688576 1688578, overlap 1688576 1688578 TTTATAAATCAAGTA AAAAAACACCCCAAGGATGA TATT TCACCCTTGGGGTATTTATA TTTTTTCATAGGTTA TERM 1950 1688576 - 1688607 + r 100 -11.6 -4.66347 | opp_overlap 1688576 1688578, overlap 1688570 1688578 AATCAAGTAAAAAAA CACCCCAAGGATGA TATT TCACCCTTGGGGTA TTTATATTTTTTCAT TERM 1951 1688607 - 1688576 - R 100 -16 -5.66868 | opp_overlap 1688576 1688570 1688578, overlap 1688578 AATCAAGTAAAAAAA CACCCCAAGGATGA TATT TCACCCTTGGGGTA TTTATATTTTTTCAT TERM 1952 1688578 - 1688605 + r 100 -14.2 -3.91191 | opp_overlap 1688576 1688578, overlap 1688576 1688570 TCAAGTAAAAAAACA CCCCAAGGATGA TATT TCACCCTTGGGG TATTTATATTTTTTC TERM 1953 1688605 - 1688578 - R 100 -16.4 -4.45473 | opp_overlap 1688578 1688576 1688570, overlap 1688576 TCAAGTAAAAAAACA CCCCAAGGATGA TATT TCACCCTTGGGG TATTTATATTTTTTC THA_1682 1689129 - 1688626 - | rubrerythrin, putative THA_1683 1690979 - 1689129 - | glutamate synthase, beta subunit THA_1684 1692095 - 1690992 - | NADH-ubiquinone oxidoreductase 49 kda subunit THA_1685 1692618 - 1692088 - | NADH dehydrogenase, 30 kda subunit, putative TERM 1954 1692145 - 1692159 + g 79 -5.7 -5.09259 | AACGTCTTTTTTATA TTCCC TGTCC GGGAA TTTTCTTTTAGAATA THA_1686 1693141 - 1692599 - | NADH dehydrogenase beta subunit THA_1687 1694042 - 1693155 - | membrane bound hydrogenase, MbxM subunit TERM 1955 1693818 - 1693806 - G 72 -6.3 -4.20918 | opp_overlap 1693806 1693805 TCCAAGTGGAACAAA TGCTA ATG TAGCA ATTGTGCCGCCCAAA THA_1688 1695890 - 1694046 - | NADH dehydrogenase subunit n THA_1689 1697099 - 1695891 - | NADH dehydrogenase subunit n TERM 1956 1696511 - 1696497 - GH 72 -7.2 -3.8579 | AGTTAATAATCCAAA GATGTA AAT TACATC AAGGAAATACCCATT THA_1690 1697098 - 1697259 + | hypothetical protein THA_1691 1697581 - 1697240 - | NADH-ubiquinone oxidoreductase, chain 4l THA_1692 1698306 - 1697584 - | MnhB subunit of Na+/H+ antiporter family-like domain protein TERM 1957 1697712 - 1697700 - G 74 -9.1 -2.83674 | opp_overlap 1697697 1697697, overlap 1697693 1697697 1697690 ACAAATTACCAACTA CTCCC GTT GGGAG GAAGTTTAGTAAGAA THA_1693 1698542 - 1698303 - | hypothetical protein THA_1694 1698859 - 1698539 - | monovalent cation/proton antiporter, MnhG/PhaG subunit THA_1695 1699113 - 1698856 - | multiple resistance and pH regulation protein F THA_1696 1699592 - 1699110 - | cation antiporter THA_1697 1699874 - 1700497 + | redox-sensing transcriptional repressor rex 1 THA_1698 1700548 - 1701153 + | hypothetical protein patB 1702379 - 1701225 - | aminotransferase, class II TERM 1958 1702113 - 1702083 - G 72 -7.6 -3.60098 | opp_overlap 1702071 1702105 1702106 1702107, overlap 1702100 AGCTTGTATTGCAAA TGCAATTCCTGGAA CCA CTCCAGGGATTGGA ACAATCCAGTCTTTT TERM 1959 1702106 - 1702120 + g 70 -8.6 -2.58303 | opp_overlap 1702083 1702100, overlap 1702105 1702107 CTGGAACCACTCCAG GGATTG GAA CAATCC AGTCTTTTTTTATTT TERM 1960 1702107 - 1702124 + g 95 -6.3 -6.20267 | opp_overlap 1702083 1702100, overlap 1702106 1702105 TGGAACCACTCCAGG GATTGGA ACAA TCCAGTC TTTTTTTATTTTTAC THA_1700 1702505 - 1703161 + | hypothetical protein TERM 1961 1703411 - 1703377 - T 100 -13 -4.33258 | opp_overlap 1703371 1703377 1703378, overlap 1703378 ACTTTCAAATAGAAA GGCCCGTTTCTAGT TTTTCTT ACTAGAAACGGGCA TTATTTGTAAGCATG TERM 1962 1703377 - 1703411 + T 100 -13 -4.07133 | opp_overlap 1703377 1703378, overlap 1703371 1703378 ACTTTCAAATAGAAA GGCCCGTTTCTAGT TTTTCTT ACTAGAAACGGGCA TTATTTGTAAGCATG TERM 1963 1703410 - 1703378 - T 100 -16.5 -3.19232 | opp_overlap 1703371 1703377 1703378, overlap 1703377 CTTTCAAATAGAAAG GCCCGTTTCTAGT TTTTCTT ACTAGAAACGGGC ATTATTTGTAAGCAT TERM 1964 1703378 - 1703410 + T 100 -16.5 -3.03798 | opp_overlap 1703378 1703377, overlap 1703371 1703377 CTTTCAAATAGAAAG GCCCGTTTCTAGT TTTTCTT ACTAGAAACGGGC ATTATTTGTAAGCAT THA_1701 1705267 - 1703465 - | 2',3'-cyclic-nucleotide 2'-phosphodiesterase THA_1702 1705840 - 1705280 - | tdk thymidine kinase TERM 1965 1705971 - 1705993 + H 74 -7.8 -3.85698 | opp_overlap 1705979 AAAATAGCATTGGGA GTGATAGATT GAC AATCAATCAC TTTATAAAAAGGAAA TERM 1966 1706258 - 1706224 - g 70 -6 -4.20883 | opp_overlap 1706235, overlap 1706209 1706235 GAAAAATCTTGAAAA TATTTTAAAAATTTTC TAT GAAAATTATAAAAATA TGATAGAGCACGTTT TERM 1967 1706247 - 1706235 - g 71 -4.9 -4.69464 | opp_overlap 1706235, overlap 1706209 1706224 AAAATATTTTAAAAA TTTTC TAT GAAAA TTATAAAAATATGAT TERM 1968 1706368 - 1706393 + G 73 -8.5 -3.54129 | opp_overlap 1706367 1706366 1706368, overlap 1706369 CTGGTTTAAAAAATC TTTGGAAAAAA AGGA TTTTTTCCAAG TTTCCCCACCATATA TERM 1969 1706369 - 1706392 + G 76 -9.8 -2.72263 | opp_overlap 1706367 1706368 1706366, overlap 1706368 TGGTTTAAAAAATCT TTGGAAAAAA AGGA TTTTTTCCAA GTTTCCCCACCATAT THA_1703 1705979 - 1707634 + | HD domain protein TERM 1970 1707695 - 1707675 - T 100 -12.6 -5.72118 | opp_overlap 1707672 AAAAAATAGAAAAAA CCCCATCC TCAAT GGATGGGG ACCATTTCATATTTG THA_1705 1708272 - 1707820 - | had-superfamily phosphatase subfamily iiia THA_1706 1708821 - 1708297 - | hypothetical protein THA_1707 1709358 - 1708828 - | hypothetical protein THA_1708 1710518 - 1709415 - | tetratricopeptide repeat domain protein TERM 1971 1710102 - 1710114 + g 81 -4.9 -5.42164 | opp_overlap 1710102 AATTAAGAAAAGTAT CAATT TTG AATTG TTTTTCTTATTTGTA THA_1709 1711798 - 1710533 - | rho transcription termination factor Rho THA_1710 1712436 - 1711810 - | upp uracil phosphoribosyltransferase prfA 1713502 - 1712426 - | peptide chain release factor 1 THA_1712 1714551 - 1713490 - | motility protein PilT TERM 1972 1714325 - 1714344 + g 81 -3.6 -5.54894 | CTAATATTATGTATA GAAAAAGA AAAA TCTATTTC TTTTTTTAATGAGTT THA_1713 1715994 - 1714552 - | DNA polymerase III, gamma and tau subunit miaA 1716902 - 1715997 - | tRNA delta(2)-isopentenylpyrophosphate transferase THA_1715 1717535 - 1716906 - | hypothetical protein THA_1716 1718265 - 1717525 - | hypothetical protein THA_1717 1719037 - 1718243 - | transmembrane TERM 1973 1718604 - 1718590 - G 81 -6.4 -5.02476 | ATAGTGGTGAAAAAA CACCAG GTA CTGATG AGCTTGCCATTACAG THA_1718 1719885 - 1719037 - | DNA-(apurinic or apyrimidinic site) lyase 1 THA_1719 1720214 - 1719882 - | hypothetical protein nadE2 1721947 - 1720217 - | glutamine-dependent NAD+ synthetase TERM 1974 1721969 - 1721993 + H 100 -9.5 -5.0133 | opp_overlap 1721969 CCCTCCTCAATCAAA TTATATCACGA TTT TTGTGATATAA TTTTTTAAAGGGGTG TERM 1975 1721993 - 1721969 - H 72 -7.3 -3.90112 | opp_overlap 1721969 CCCTCCTCAATCAAA TTATATCACGA TTT TTGTGATATAA TTTTTTAAAGGGGTG TERM 1976 1722265 - 1722275 + G 75 -4 -5.20216 | overlap 1722273 CGGAATTATATTTTT TGAA GCT TTCA TTTTTTAATGATATA THA_1721 1722015 - 1722641 + | transcriptional regulator, MarR family TERM 1977 1722875 - 1722860 - g 77 -4.8 -5.28414 | GAAGAAAGACAAAAA TTTCAT TTAC ATGAAA CTCACATAAGAATAT THA_1722 1722629 - 1723231 + | transporter, cation:proton antiporter family THA_1723 1723255 - 1724577 + | hypothetical protein THA_1724 1724562 - 1725443 + | lgt prolipoprotein diacylglyceryl transferase THA_1725 1725440 - 1726648 + | phosphoglycerate mutase TERM 1978 1726683 - 1726703 + G 100 -9 -5.79595 | opp_overlap 1726682 1726685, overlap 1726685 TTTTATCTTCAATAT TAGGGGCT TTGAT AGCCCCTG TTTTTTCTTTTCCAA TERM 1979 1726685 - 1726701 + G 100 -9.4 -4.53077 | opp_overlap 1726682 1726685, overlap 1726683 TTATCTTCAATATTA GGGGCT TTGAT AGCCCC TGTTTTTTCTTTTCC TERM 1980 1726701 - 1726685 - g 74 -9.4 -2.74523 | opp_overlap 1726685 1726683, overlap 1726682 TTATCTTCAATATTA GGGGCT TTGAT AGCCCC TGTTTTTTCTTTTCC TERM 1981 1727049 - 1727029 - g 100 -9.8 -5.03405 | opp_overlap 1727029 AACATTAGATAAAAA TAGGGTGA TTGTC TCACCCTA TTTTTCTTTGGTTAG TERM 1982 1727029 - 1727049 + G 100 -9.8 -5.38326 | opp_overlap 1727029 AACATTAGATAAAAA TAGGGTGA TTGTC TCACCCTA TTTTTCTTTGGTTAG THA_1726 1726652 - 1727884 + | ComEC/Rec2-related protein nusA 1729297 - 1728263 - | transcription termination factor NusA THA_1728 1729755 - 1729309 - | hypothetical protein TERM 1983 1729786 - 1729804 + H 100 -11.7 -4.36914 | opp_overlap 1729779 1729786 AATATAAATACTAAA CCGGGAC ATATA GTCCCGG TTTTCTGGCGGAGAG TERM 1984 1729804 - 1729786 - H 100 -11.7 -4.07089 | opp_overlap 1729786, overlap 1729779 AATATAAATACTAAA CCGGGAC ATATA GTCCCGG TTTTCTGGCGGAGAG TERM 1985 1729875 - 1729837 - H 95 -13 -2.53876 | TGGGATTTGAACCCA CGGACGCCTTGTGGGCGT CAC ACGCTCTCCAGGCGTGCG CCTTCGACCCCTCGG THA_1730 1730018 - 1730770 + | membrane protein THA_1731 1730791 - 1731060 + | enzyme of the cupin superfamily THA_1732 1731077 - 1731700 + | methenyltetrahydrofolate cyclohydrolase TERM 1986 1732186 - 1732215 + G 95 -10.9 -3.96148 | opp_overlap 1732195, overlap 1732187 TTACAAGTCTTTGGG CTGAACGAAGTTT AAAA AAACTTCGTTCAC TTTCTGATCAAGCAA TERM 1987 1732187 - 1732214 + G 100 -14.4 -2.97475 | opp_overlap 1732195, overlap 1732186 TACAAGTCTTTGGGC TGAACGAAGTTT AAAA AAACTTCGTTCA CTTTCTGATCAAGCA TERM 1988 1732748 - 1732725 - g 74 -8.3 -3.63352 | opp_overlap 1732729, overlap 1732723 1732729 AGTAAAAAGATAAGA GAAAGTATC GAGAAT GATACTTTC CAGGAACTAAGGGGG THA_1733 1731684 - 1732787 + | tgt queuine tRNA-ribosyltransferase THA_1734 1732780 - 1733556 + | hypothetical protein THA_1735 1733558 - 1734088 + | PyrR bifunctional protein glmM 1734085 - 1735377 + | phosphoglucosamine mutase THA_1737 1735383 - 1735688 + | metal-sulfur cluster biosynthetic enzyme TERM 1989 1735744 - 1735725 - g 73 -9.3 -2.53519 | opp_overlap 1735722 1735725, overlap 1735724 1735722 TTTACAAAGATAGAG GGCTTCC TGAATT GGAAGCC TATCTTGTTATAAAA TERM 1990 1735725 - 1735744 + G 78 -9.3 -3.31208 | opp_overlap 1735725 1735724 1735722, overlap 1735722 TTTACAAAGATAGAG GGCTTCC TGAATT GGAAGCC TATCTTGTTATAAAA THA_1738 1735685 - 1736470 + | methyltransferase rplI 1736476 - 1736931 + | ribosomal protein L9 TERM 1991 1737064 - 1737035 - g 79 -8.1 -4.01158 | opp_overlap 1737040, overlap 1737040 1737054 AACTTTATTAAATAA TAAAATATATGCT ATTA AGCATATATTTTT AACACATGGCCATGT TERM 1992 1737059 - 1737040 - g 90 -8 -5.02606 | opp_overlap 1737040, overlap 1737035 1737054 TATTAAATAATAAAA TATATGCT ATTA AGCATATA TTTTTAACACATGGC TERM 1993 1737040 - 1737059 + G 83 -8 -4.58395 | opp_overlap 1737040 1737035 1737054 TATTAAATAATAAAA TATATGCT ATTA AGCATATA TTTTTAACACATGGC THA_1740 1736928 - 1737767 + | metallo-beta-lactamase superfamily, putative TERM 1994 1740520 - 1740530 + G 83 -6.8 -5.03715 | overlap 1740517 ATGAAAAATTTTTGA CAGC GTC GCTG TTTTTTAAAGATGGT TERM 1995 1740941 - 1740931 - g 75 -4 -5.28778 | AGGAGTTAGAAAAAA TTCT AGA AGAA AGAGAGCCGTTAAAT TERM 1996 1740981 - 1740969 - g 70 -6.3 -4.18817 | AATGCAATAAAAAGA TTAGC GCA GCTAA AGATTTTAAAACACA THA_1742 1738962 - 1741541 + | polyA polymerase family protein THA_1743 1741538 - 1742707 + | hypothetical protein THA_1744 1743613 - 1742696 - | hypothetical protein THA_1745 1744290 - 1743610 - | hypothetical protein THA_1746 1744721 - 1744278 - | hypothetical protein THA_1747 1745026 - 1744718 - | hypothetical protein TERM 1997 1744879 - 1744893 + g 89 -4.2 -5.84011 | overlap 1744865 1744881 TTTCAACAACTTTTG GTGAAC TTT GTTCTC TTTTTATTTTTTCTT THA_1748 1745708 - 1745028 - | RNA polymerase sigma factor for flagellar operon TERM 1998 1745366 - 1745380 + g 70 -3.6 -5.04385 | TTTCAATAGGCAGAT TAGTAA TTT TTGCTA TTTTTTCAAAATCTA TERM 1999 1745614 - 1745634 + g 85 -8.3 -4.67048 | opp_overlap 1745615, overlap 1745615 TGTATCAAATCATCA ACTTCCACA TTG TGTGGAAGA TTTCTTTTCAAATCG TERM 2000 1745633 - 1745615 - G 95 -11.8 -3.34227 | opp_overlap 1745615 1745614 GTATCAAATCATCAA CTTCCACA TTG TGTGGAAG ATTTCTTTTCAAATC TERM 2001 1745615 - 1745633 + g 95 -11.8 -3.39506 | opp_overlap 1745615, overlap 1745614 GTATCAAATCATCAA CTTCCACA TTG TGTGGAAG ATTTCTTTTCAAATC THA_1749 1746187 - 1745705 - | chemoreceptor glutamine deamidase CheD THA_1750 1746804 - 1746187 - | CheY-P phosphatase CheC THA_1751 1747481 - 1746816 - | type IV pilus assembly protein PilZ TERM 2002 1747093 - 1747103 + g 78 -4 -5.47399 | ATAGCTTCTGAATTT TCAT CCA ATGA TTTTTTTAAAATTCC THA_1752 1748029 - 1747496 - | hypothetical protein THA_1753 1748859 - 1748026 - | CobQ/CobB/MinD/ParA nucleotide binding domain, putative TERM 2003 1748498 - 1748514 + gr 70 -5.2 -4.53705 | GTAAAATCATAATCT TTTGCA ATTTG TGCAAA TTTTATGTAAAAGTT THA_1754 1749967 - 1748831 - | flagellar biosynthesis protein FlhF flhA 1752015 - 1749964 - | flagellar biosynthesis protein FlhA TERM 2004 1750103 - 1750113 + g 79 -5.4 -5.2112 | opp_overlap 1750101 1750095 1750103 GAACAAATTAAAACA GGAT TAT ATCC TTTTTTCATAATATT TERM 2005 1750669 - 1750686 + g 70 -4.1 -4.94058 | opp_overlap 1750656 1750665, overlap 1750674 AATCCAAAATGCTTG GAGCC CAAAAGCT GGCTC TTTTGTTTCGATTCC TERM 2006 1751996 - 1751967 - G 72 -5.1 -4.75219 | opp_overlap 1751970, overlap 1751972 GAATCATTAATAAAA CAATAGCAGCAAT CATT ATTGCTACAATTA TATCAGTACCTTTTG TERM 2007 1751991 - 1751972 - G 71 -7.2 -3.82554 | opp_overlap 1751970, overlap 1751967 ATTAATAAAACAATA GCAGCAAT CATT ATTGCTAC AATTATATCAGTACC TERM 2008 1752530 - 1752572 + r 75 -9.4 -2.89935 | gap 1, opp_overlap 1752542 1752543, overlap 1752543 TAAAAATTAAGTATT CAAGCAAAA-AAATGCCCC GATAAA GGGGCTTTTATTTTGTTTG TCTATAAGGATATTT TERM 2009 1752559 - 1752542 - R 81 -4 -5.64006 | opp_overlap 1752530 1752543, overlap 1752543 ATTCAAGCAAAAAAA TGCCCC GATAAA GGGGCT TTTATTTTGTTTGTC TERM 2010 1752543 - 1752558 + r 100 -7.5 -5.3689 | opp_overlap 1752542 1752543, overlap 1752530 TTCAAGCAAAAAAAT GCCCC GATAAA GGGGC TTTTATTTTGTTTGT TERM 2011 1752558 - 1752543 - R 77 -7.5 -3.96777 | opp_overlap 1752543 1752530, overlap 1752542 TTCAAGCAAAAAAAT GCCCC GATAAA GGGGC TTTTATTTTGTTTGT THA_1759 1753292 - 1752603 - | DNA alkylation repair enzyme superfamily TERM 2012 1752810 - 1752828 + g 72 -7.6 -3.63095 | TAGCAATTCGCTTAT TTTTAAAG CAT CTTTAAAA TCGTTTTTTTTGATA THA_1760 1753782 - 1753624 - | hypothetical protein THA_1761 1753905 - 1754027 + | hypothetical protein TERM 2013 1754218 - 1754189 - T 100 -7.3 -5.4387 | gap 1, opp_overlap 1754189 ATATAAATTAAAAAA GCCCCATT-CTA GCAGATT TAGGAATGGGGC TAATTAATTGAGCTT THA_1762 1755438 - 1754251 - | hypothetical protein TERM 2014 1755459 - 1755483 + H 71 -3 -5.1523 | opp_overlap 1755459, overlap 1755451 CACCTCCCATAATAA TTATACCATA CTTTT TATGATATAA TTTTTATGTTCTAGG TERM 2015 1755967 - 1755955 - g 76 -6.3 -4.61852 | AATATGATAAAGAAA CTAGA GAA TCTAG ACTTACCATTTAAAA TERM 2016 1756402 - 1756386 - g 78 -3.1 -5.51078 | AAAAGAAAAAGAAAA TTTTCAA AGC TTAAAAA AATTTCTTTCTACGA THA_1763 1755508 - 1756737 + | hypothetical protein TERM 2017 1757512 - 1757527 + GF 70 -4 -5.00616 | opp_overlap 1757513 1757524, overlap 1757513 ATTGGTAATTGTAAA TCAACT TGAA AGTTGG TTTTTTGCACCAAAA THA_1764 1756739 - 1757722 + | membrane protein THA_1765 1757697 - 1758452 + | MazG protein THA_1766 1758449 - 1759165 + | RNA methyltransferase, TrmH family, group 3 THA_1767 1759146 - 1759799 + | response regulator receiver THA_1768 1759821 - 1760513 + | zinc-dependent proteinase TERM 2018 1760588 - 1760613 + G 100 -12 -5.4477 | TCAGAATTCTATCAG GCTTTCTCCT ATGTGG AGGAGAAAGC TTTTTTTAAGAATTT TERM 2019 1760663 - 1760651 - g 74 -6.3 -4.37886 | GGAGTTTTGAGAAAA CAAGA ATA TCTTG ACTGGATAATTGATT THA_1769 1760510 - 1761757 + | sun protein TERM 2020 1763312 - 1763294 - g 71 -3 -5.27769 | opp_overlap 1763308, overlap 1763295 1763297 AGAAAAAACTAAAAA CCATCCAC TTC GTGGAAGT ATAGAAAGACTTCTT TERM 2021 1763309 - 1763297 - g 71 -7.7 -3.39564 | opp_overlap 1763308, overlap 1763295 1763294 AAAAACTAAAAACCA TCCAC TTC GTGGA AGTATAGAAAGACTT THA_1770 1761762 - 1763882 + | rnr ribonuclease R TERM 2022 1763866 - 1763898 + T 74 -7.8 -3.95893 | opp_overlap 1763866 1763872, overlap 1763871 1763872 TAGACTTTGAAATAG CAAAAAGTGAGGCT TAAAT AGCCTCACCTTTTA TTTGCTATATATTTT TERM 2023 1763898 - 1763866 - T 89 -12.2 -2.62171 | opp_overlap 1763866 1763871 1763872, overlap 1763872 TAGACTTTGAAATAG CAAAAAGTGAGGCT TAAAT AGCCTCACCTTTTA TTTGCTATATATTTT TERM 2024 1763871 - 1763893 + T 89 -7.7 -4.98061 | opp_overlap 1763866 1763872, overlap 1763866 1763872 TTTGAAATAGCAAAA AGTGAGGCT TAAAT AGCCTCACC TTTTATTTGCTATAT TERM 2025 1763892 - 1763872 - T 100 -11.2 -4.93696 | opp_overlap 1763871 1763866 1763872, overlap 1763866 TTGAAATAGCAAAAA GTGAGGCT TAAAT AGCCTCAC CTTTTATTTGCTATA TERM 2026 1763872 - 1763892 + T 89 -11.2 -3.5721 | opp_overlap 1763872 1763866, overlap 1763871 1763866 TTGAAATAGCAAAAA GTGAGGCT TAAAT AGCCTCAC CTTTTATTTGCTATA THA_1771 1764107 - 1763889 - | hypothetical protein ligA 1764195 - 1766192 + | DNA ligase, NAD-dependent THA_1773 1766703 - 1766182 - | lipoprotein, putative TERM 2027 1766218 - 1766241 + g 100 -10.4 -5.4505 | opp_overlap 1766218 TAATTTTTTTGAGAA TTCATCCTCA TAAA TGGGGATGAA TTTTTTGTTACCCGG TERM 2028 1766241 - 1766218 - G 72 -8.2 -3.29461 | opp_overlap 1766218 TAATTTTTTTGAGAA TTCATCCTCA TAAA TGGGGATGAA TTTTTTGTTACCCGG THA_1774 1768241 - 1766721 - | ATPase involved in DNA repair TERM 2029 1767865 - 1767853 - G 77 -4.9 -5.25893 | opp_overlap 1767853, overlap 1767846 ATAGATATCAAAAAA TTTTG TTC CAAAA ATTTCATGTGTGAAT THA_1775 1768627 - 1768238 - | cdd cytidine deaminase THA_1776 1769912 - 1768620 - | integral membrane protein with CBS domains THA_1777 1771611 - 1769941 - | radical SAM N- domain protein TERM 2030 1771081 - 1771099 + g 71 -6 -4.42788 | TTTTTCTATACATCT GGCAATTT CTA AAATAGCC TTTTCTCCCATTCCA TERM 2031 1771426 - 1771399 - G 81 -6.5 -5.10029 | gap 1, opp_overlap 1771403, overlap 1771403 AGTAATTCCAAAAAA TA-AACGAGGTT TTCCT AACCTCGTTATA TCATCAGAATTATAA TERM 2032 1771421 - 1771403 - G 100 -8.9 -5.05153 | opp_overlap 1771403, overlap 1771399 ATTCCAAAAAATAAA CGAGGTT TTCCT AACCTCG TTATATCATCAGAAT TERM 2033 1771403 - 1771421 + g 77 -8.9 -3.54653 | opp_overlap 1771403 1771399 ATTCCAAAAAATAAA CGAGGTT TTCCT AACCTCG TTATATCATCAGAAT rsgA 1772478 - 1771615 - | ribosome small subunit-dependent GTPase A THA_1779 1772954 - 1772475 - | hypothetical protein THA_1780 1774000 - 1772975 - | radical SAM enzyme, Cfr family TERM 2034 1774080 - 1774048 - R 93 -8 -5.31275 | gap 1, opp_overlap 1774054, overlap 1774050 1774054 TTTTATCATAAAAAA CATTAA-GGTTCTCT TTAA AGAGAACCTTTAATA TAAAATGGTAAAATA TERM 2035 1774077 - 1774050 - R 93 -10 -4.29153 | opp_overlap 1774054, overlap 1774048 1774054 TTATCATAAAAAACA TTAAGGTTCTCT TTAA AGAGAACCTTTA ATATAAAATGGTAAA TERM 2036 1774054 - 1774073 + r 90 -10.8 -3.83998 | opp_overlap 1774050 1774048 1774054 CATAAAAAACATTAA GGTTCTCT TTAA AGAGAACC TTTAATATAAAATGG TERM 2037 1774073 - 1774054 - R 89 -10.8 -3.69405 | opp_overlap 1774054, overlap 1774050 1774048 CATAAAAAACATTAA GGTTCTCT TTAA AGAGAACC TTTAATATAAAATGG THA_1781 1775876 - 1774101 - | flagellar hook-associated protein 2 TERM 2038 1774131 - 1774143 + g 79 -7.7 -4.20136 | opp_overlap 1774131 AGCTTGGGCAATGTA TGCAC CTT GTGCA TTTAGTTTTGAAAGT TERM 2039 1775793 - 1775739 - G 81 -10.3 -3.09933 | opp_overlap 1775741, overlap 1775753 GTTTAATCTATTTAA TGGTTGAGATTCAACTTCCATAA GTTTTTCGA TTATGGAAGCTGTATCCAAACCA CTAGTTACTCCGCCA THA_1782 1776229 - 1775891 - | FlaG rbfA 1776650 - 1776270 - | ribosome-binding factor A THA_1784 1777497 - 1776640 - | hdod domain family TERM 2040 1777159 - 1777187 + g 91 -5.3 -5.77988 | opp_overlap 1777159 TACCTCAGAAATAAT TGCTGTCGACATA AAA TGTTTCCACAGCA TTTTTTTATCTATCT THA_1785 1778899 - 1777502 - | sensor histidine kinase argS 1780542 - 1778911 - | arginyl-tRNA synthetase TERM 2041 1779127 - 1779149 + g 81 -5.7 -5.22006 | gap 1, opp_overlap 1779126, overlap 1779131 TTCAACTTGATATAG TGAGTGGATG AACT CATCCA-TCA TTTTTATTATACTCA TERM 2042 1779131 - 1779146 + g 71 -7.6 -3.42342 | opp_overlap 1779126, overlap 1779127 ACTTGATATAGTGAG TGGATG AACT CATCCA TCATTTTTATTATAC TERM 2043 1780383 - 1780395 + g 79 -5.5 -5.07053 | CAAACAATTTTGCAA CCTCT CTT GGAGG TTTTTTAAAATGCTT THA_1787 1781128 - 1780544 - | protein containing GTP binding domain THA_1788 1783436 - 1781109 - | lon ATP-dependent protease La THA_1789 1783947 - 1783429 - | hypothetical protein THA_1790 1784069 - 1783956 - | hypothetical protein THA_1791 1784964 - 1784080 - | PSP1 domain protein TERM 2044 1784656 - 1784670 + g 72 -2.8 -5.43866 | TGAATATAAAACCTT CATGTT TAG ACCATG TTTTTTTACAAGTTG fabF 1785180 - 1786406 + | 3-oxoacyl-[acyl-carrier-protein] synthase 2 THA_1793 1786409 - 1786819 + | (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase ((3R)-hydroxymyristoyl ACP dehydrase) THA_1794 1786825 - 1787757 + | putative enoyl-(acyl-carrier-protein) reductase II THA_1795 1787754 - 1788257 + | BioY protein fabD 1788254 - 1789147 + | malonyl CoA-acyl carrier protein transacylase TERM 2045 1789214 - 1789188 - f 100 -13.9 -4.11216 | opp_overlap 1789188 TTCTTATCTTGAAAA CATGGCTTCAA TTTGT TTGAAGCCATG TTTTTTATTTGTTGA TERM 2046 1789188 - 1789214 + F 100 -13.9 -5.80003 | opp_overlap 1789188 TTCTTATCTTGAAAA CATGGCTTCAA TTTGT TTGAAGCCATG TTTTTTATTTGTTGA THA_1797 1789304 - 1789729 + | hypothetical protein TERM 2047 1789790 - 1789780 - f 83 -6.8 -4.77719 | GAAAAGTGAATAAAA TCCC AAG GGGA GCTCCATAATCCGGG TERM 2048 1789906 - 1789931 + F 100 -10.3 -5.4505 | opp_overlap 1789908, overlap 1789907 1789908 CTATAAGTTTATAAT AACCCCTCCGC TTTT GCGGAGGGGAA TTTTTTATTAAGGAG TERM 2049 1789907 - 1789930 + F 100 -13.8 -3.86307 | opp_overlap 1789908, overlap 1789906 1789908 TATAAGTTTATAATA ACCCCTCCGC TTTT GCGGAGGGGA ATTTTTTATTAAGGA TERM 2050 1789929 - 1789908 - f 100 -17.3 -3.82592 | opp_overlap 1789907 1789906 1789908 ATAAGTTTATAATAA CCCCTCCGC TTTT GCGGAGGGG AATTTTTTATTAAGG TERM 2051 1789908 - 1789929 + F 100 -17.3 -2.91061 | opp_overlap 1789908, overlap 1789907 1789906 ATAAGTTTATAATAA CCCCTCCGC TTTT GCGGAGGGG AATTTTTTATTAAGG TERM 2052 1790633 - 1790651 + G 72 -8.8 -3.04715 | overlap 1790632 AGTTTCAGTAGGTGG TGGCCCCA GAA TGGGACCA ATTTTCGGCGGGATG THA_1798 1789956 - 1790729 + | thiazole biosynthesis enzyme TERM 2053 1791084 - 1791098 + G 74 -7.2 -3.96624 | opp_overlap 1791078 ATTCAGATATTCCCG TTGGAA CTG TTCCAA TTTATGATGCAGCTG thiC 1790729 - 1792006 + | thiamine biosynthesis protein ThiC TERM 2054 1792363 - 1792340 - g 72 -4 -5.13741 | opp_overlap 1792330 TGAATGGAATAAAAA TTTATTTCTT TTGG AAGAACTAAA CAGTATTATAAAAAT THA_1800 1792008 - 1792733 + | AP endonuclease, family 2 TERM 2055 1793227 - 1793190 - g 93 -5.7 -5.77571 | opp_overlap 1793193, overlap 1793201 ATGAAAAAATAAAAA TAACCTATAAAGGTAAA GAAT TTTACCATGAAAGGTTA AATGGTAACTTTAGA TERM 2056 1793216 - 1793201 - g 70 -6.2 -4.04764 | opp_overlap 1793193, overlap 1793190 AAAATAACCTATAAA GGTAAA GAAT TTTACC ATGAAAGGTTAAATG TERM 2057 1793444 - 1793430 - g 75 -5.8 -4.72631 | ATGAACTTAATAAAA TAATGT TAG ACATTA TGGAAATTGGTAGAT THA_1801 1792733 - 1793941 + | phosphomethylpyrimidine kinase family pfkA 1794036 - 1794995 + | 6-phosphofructokinase TERM 2058 1795108 - 1795134 + G 85 -7.3 -4.98255 | opp_overlap 1795106 1795108 TGCCCAAGAAATAGA CCTGGAGGG TAAATACAT CCTTCCAGG TTTTTCTGATTCCCA TERM 2059 1796190 - 1796172 - g 100 -11.8 -5.30155 | opp_overlap 1796172 TGATTAATGAAAAAA TTGGGCTT TTA AAGCCCAA TTATAAAGCGGATTT TERM 2060 1796172 - 1796190 + G 95 -11.8 -3.2964 | opp_overlap 1796172 TGATTAATGAAAAAA TTGGGCTT TTA AAGCCCAA TTATAAAGCGGATTT THA_1803 1794992 - 1796296 + | amidohydrolase family, putative THA_1804 1797294 - 1796269 - | biotin synthase THA_1805 1797526 - 1797278 - | hypothetical protein TERM 2061 1797397 - 1797385 - G 74 -9.1 -2.88861 | opp_overlap 1797381 1797378 1797375 TATCATCTTCATATA CCACC ATT GGTGG TAAATAATATTCATT THA_1806 1798928 - 1797513 - | thiamine biosynthesis protein ThiH TERM 2062 1798855 - 1798872 + g 76 -2.8 -5.53991 | GGATTAAGATTTGAG GATAAA TTTTCT TTTATC TTTTTTTCATCGATA THA_1807 1799181 - 1798933 - | hypothetical protein TERM 2063 1799222 - 1799189 - R 100 -11.2 -4.96848 | opp_overlap 1799187 CTTTCCATATAAAAA TCCCCTTTCCTT TTTATTTTCC AAGGAAAGGGGA AAATTAATGCATTAT THA_1808 1801091 - 1799340 - | hydrogenase TERM 2064 1799788 - 1799804 + g 73 -8.7 -3.05384 | GTAATAATTTCATAT GCTGTTC TAA GAGCAGC TTCCATAACCCCACC THA_1809 1802173 - 1801292 - | transporter, auxin efflux carrier (AEC) family TERM 2065 1801865 - 1801889 + g 78 -9.3 -3.35912 | opp_overlap 1801867 1801868, overlap 1801867 1801868 CCAAATAGAATACAA AATGGGATACC CAA GGTATCCCGTG TTAATGTATATACTA TERM 2066 1801887 - 1801867 - G 100 -9.7 -4.80729 | opp_overlap 1801865 1801867 1801868, overlap 1801868 AAATAGAATACAAAA TGGGATACC CAA GGTATCCCG TGTTAATGTATATAC TERM 2067 1801867 - 1801887 + g 95 -11.9 -3.24235 | opp_overlap 1801867 1801868, overlap 1801865 1801868 AAATAGAATACAAAA TGGGATACC CAA GGTATCCCG TGTTAATGTATATAC TERM 2068 1801886 - 1801868 - G 100 -13.2 -3.45997 | opp_overlap 1801867 1801865 1801868, overlap 1801867 AATAGAATACAAAAT GGGATACC CAA GGTATCCC GTGTTAATGTATATA TERM 2069 1801868 - 1801886 + g 100 -13.2 -2.54059 | opp_overlap 1801868 1801867, overlap 1801867 1801865 AATAGAATACAAAAT GGGATACC CAA GGTATCCC GTGTTAATGTATATA TERM 2070 1801983 - 1801967 - G 85 -8.1 -4.46609 | ATAAAACAAGATAAA TAGGAAT AGT ATTCCTA ATCCGTAAGATTTAA THA_1810 1802439 - 1802170 - | hypothetical protein THA_1811 1802911 - 1802432 - | ribonuclease III THA_1812 1804071 - 1803043 - | NAD synthase family TERM 2071 1803611 - 1803596 - G 82 -6.2 -5.24551 | opp_overlap 1803596 TTAAATGAATAAAAA TCCAAA ATAT TTTGGA TTTCAGATTTATTTA THA_1813 1804754 - 1804074 - | biotin-[acetyl-CoA-carboxylase] ligase TERM 2072 1804307 - 1804285 - G 73 -5.8 -4.55295 | opp_overlap 1804262 1804285, overlap 1804264 TTGTTTATAAATAAA TTTAAAATTA AAT TAATTTCAAA TTTTTTTTCAGTAAC TERM 2073 1804285 - 1804307 + g 85 -3.6 -5.81412 | opp_overlap 1804264 1804285, overlap 1804262 TTGTTTATAAATAAA TTTAAAATTA AAT TAATTTCAAA TTTTTTTTCAGTAAC mviN 1806165 - 1804738 - | integral membrane protein MviN TERM 2074 1806022 - 1806006 - G 71 -4.5 -4.72272 | overlap 1806007 CTCCTTCACCAAAAA CTTTTCT AAG AAAAAAG GGAAACATGATGGCT THA_1815 1806275 - 1806556 + | electron transport complex, rnfaBcdge type, b subunit dprA 1806562 - 1807362 + | DNA protecting protein DprA panC 1807340 - 1808176 + | pantoate--beta-alanine ligase THA_1818 1808199 - 1810307 + | alpha-glucosidase 2 THA_1819 1810319 - 1812412 + | polyribonucleotide nucleotidyltransferase THA_1820 1812419 - 1813693 + | processing protease, putative THA_1821 1813671 - 1814666 + | HD domain protein hslU 1814678 - 1816057 + | heat shock protein HslVU, ATPase subunit HslU TERM 2075 1816381 - 1816404 + G 70 -5.5 -4.29738 | opp_overlap 1816377 TAATAACAGTATTTA GTAAAAAAA AGAACA TTTTTTTAC TTTTACTAAATGTCA THA_1823 1816071 - 1817360 + | sugar ABC transporter, permease protein TERM 2076 1818907 - 1818925 + G 75 -4.6 -5.06414 | overlap 1818909 GCTGCTCCTTTTGGT CAGTATTA TAT TAATACAG TTTTTGTTGCGACGG THA_1824 1817371 - 1819527 + | sugar ABC transporter, permease protein THA_1825 1819544 - 1820194 + | transaldolase, putative TERM 2077 1820641 - 1820627 - g 71 -5.7 -4.43844 | TTATTAGGCATAAAA TGGCA CAAGC TGCCA GAGAATTTTTGAATA aspS 1820200 - 1821945 + | aspartyl-tRNA synthetase THA_1827 1821938 - 1822270 + | anti-sigma factor antagonist THA_1828 1822281 - 1822949 + | cmk cytidylate kinase TERM 2078 1824272 - 1824257 - gf 85 -4.8 -5.65496 | GAGCAAAAAGAAAAA TTCTTT AATG AAAGAA AAGAAGGAGACATAA TERM 2079 1824475 - 1824463 - gf 75 -4.9 -5.08878 | opp_overlap 1824463 AATAGATAAAGAAAA TAGAA AAA TTCTA TTGAGTTTAAAAGAA THA_1829 1822922 - 1825357 + | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase TERM 2080 1825432 - 1825462 + GF 80 -9.7 -3.29043 | opp_overlap 1825425 1825437, overlap 1825434 ATAAAGAAGGTGTCA CACGAGATGCGGT AAGTG GCCGCGTCTCGTA TTATAGCAAAACATT TERM 2081 1825434 - 1825460 + GF 100 -12.3 -3.21276 | opp_overlap 1825425 1825437, overlap 1825432 AAAGAAGGTGTCACA CGAGATGCGGT AAGTG GCCGCGTCTCG TATTATAGCAAAACA TERM 2082 1825738 - 1825749 + GF 77 -4.4 -5.27335 | opp_overlap 1825734, overlap 1825734 TTTATAAGTTAGGAT TTGG TGAT CCAA TTTTTGTTTCAGCAG TERM 2083 1826207 - 1826222 + GF 81 -9 -3.76492 | opp_overlap 1826207 AGAAAACAGAGGCAA GGCAAC TATA GTTGCC TTTAATAAGATTGAC TERM 2084 1826222 - 1826207 - gf 77 -9 -3.24662 | opp_overlap 1826207 AGAAAACAGAGGCAA GGCAAC TATA GTTGCC TTTAATAAGATTGAC THA_1830 1825326 - 1826645 + | GTP-binding protein EngA TERM 2085 1828590 - 1828576 - g 76 -10 -2.85574 | opp_overlap 1828575 1828578, overlap 1828575 1828578 GCAATTTGAGCAAAG CAGCTG AAT CAGCTG ATGTAGTCTTTGCAG THA_1831 1828362 - 1829423 + | basic membrane protein THA_1832 1829454 - 1830383 + | hypothetical protein THA_1833 1830370 - 1831788 + | HD-GYP domain protein rpmH 1831854 - 1831988 + | ribosomal protein L34 rnpA 1831970 - 1832365 + | ribonuclease P protein component TERM 2086 1833156 - 1833144 - g 76 -2.7 -5.60993 | GCCCTTATAAAAAAA CTCTT ATT AAAAG TGCATTTTCAGATGA THA_1836 1832579 - 1833883 + | inner membrane protein OxaA THA_1837 1833889 - 1834560 + | jag protein, putative THA_1838 1834514 - 1834855 + | hypothetical protein THA_1839 1834848 - 1835870 + | potassium channel, putative THA_1840 1838268 - 1835848 - | PQQ enzyme repeat domain protein TERM 2087 1835882 - 1835899 + g 74 -2 -5.52079 | ATAGGTTTTTCACCT TCGGAT AAGAAA ATCTGA TTTTTCTTTTCATCT TERM 2088 1837251 - 1837265 + g 73 -5.8 -4.53607 | opp_overlap 1837251 ACTTTGAGCCAGAAA TTTCAA AAT TTGAAA TTTTATAATACTTTT TERM 2089 1838130 - 1838144 + g 72 -8.6 -2.96538 | overlap 1838132 ATATAATAACTTTTC CATCAG AAG CTGATG TATATAATAAATTAT glnA2 1838430 - 1839800 + | glutamine synthetase, type I TERM 2090 1839819 - 1839842 + F 100 -12.5 -5.27938 | opp_overlap 1839819 TCAAATATTAATGAA TCCCGGGAT TTAAAT ATCCCGGGA TTTTTATTTAAACAT TERM 2091 1839842 - 1839819 - f 91 -12.5 -3.47955 | opp_overlap 1839819 TCAAATATTAATGAA TCCCGGGAT TTAAAT ATCCCGGGA TTTTTATTTAAACAT TERM 2092 1839855 - 1839873 + F 71 -3.2 -5.25772 | GGATTTTTATTTAAA CATTTTGT AAA ATAAGATG TTTTTGTTATAATTT TERM 2093 1840083 - 1840104 + G 100 -9.5 -4.93318 | opp_overlap 1840083 CTTAACTGATTATAA TATGCCCGA TATA TCGGGTATA TTTTTATCCATTGTG THA_1842 1839925 - 1841316 + | respons regulator THA_1843 1841334 - 1842398 + | endonuclease/Exonuclease/phosphatase family protein TERM 2094 1842442 - 1842430 - g 72 -4.9 -5.00765 | AATGAATTAGAAAAA TTTGA TAA TCAAA AGGAAAAATTTAAAA TERM 2095 1843398 - 1843388 - g 70 -5.4 -4.67556 | ACAATATTCGAAAAA TAGC CCA GCTA AATGACTTAAATTTC TERM 2096 1844506 - 1844492 - g 85 -2.9 -5.86609 | CTAAAAAAATAAAAA TTTCA AATTA TGAAA TACAAAAGAAAATTA THA_1844 1842400 - 1845759 + | RecQ THA_1845 1845762 - 1846085 + | hypothetical protein TERM 2097 1846114 - 1846083 - T 100 -14.6 -4.49756 | opp_overlap 1846088, overlap 1846088 TTTGAAATATTAAAA TAAAATCTCTGCCC CTGG GGGCAGAGATTTTT TAGCCAACATTTTCT TERM 2098 1846109 - 1846088 - T 100 -14.5 -5.17488 | opp_overlap 1846088, overlap 1846083 AATATTAAAATAAAA TCTCTGCCC CTGG GGGCAGAGA TTTTTTAGCCAACAT TERM 2099 1846088 - 1846109 + T 100 -14.5 -5.00884 | opp_overlap 1846083 1846088 AATATTAAAATAAAA TCTCTGCCC CTGG GGGCAGAGA TTTTTTAGCCAACAT THA_1846 1847046 - 1846114 - | hypothetical protein THA_1847 1847786 - 1847043 - | leukotoxin translocation ATP-binding protein LktB THA_1848 1848739 - 1847789 - | hypothetical protein TERM 2100 1849731 - 1849705 - g 76 -6.8 -4.44819 | overlap 1849700 GAGAATACACTAAAA GTTTTAAAAAAT AAA ATTTTTTATAAC GAGAAAGAAATAGAT THA_1849 1848946 - 1849920 + | Oxidoreductase TERM 2101 1850790 - 1850772 - T 71 -6.6 -4.07687 | AGTCCGGTGTGAAAA CTCACGGC TCA ACCGTGGG ACTGCGCTGGAAACT TERM 2102 1852223 - 1852245 + T 79 -10.6 -2.57344 | opp_overlap 1852224, overlap 1852222 AGGGGAGGAGCCTAA ACCAACGTGT AAT ACACGTTGGG GTTGTGGGACAAGTC TERM 2103 1852244 - 1852224 - T 100 -14.1 -3.62096 | opp_overlap 1852223 1852222 GGGGAGGAGCCTAAA CCAACGTGT AAT ACACGTTGG GGTTGTGGGACAAGT TERM 2104 1853300 - 1853272 - T 79 -10.3 -2.53164 | overlap 1853271 1853275 1853290 CCAGGCATGAGTAAG CGAGAGGAGAG TGAGAAT CTCTCCCCCCG AAAGCCTAAGGGTAC TERM 2105 1854468 - 1854452 - T 79 -7.3 -4.48221 | GATCAACGGACAAAA GTTACCC CGG GGATAAC AGGCTAGTCTTGCCC TERM 2106 1855100 - 1855119 + T 100 -9.3 -5.69793 | opp_overlap 1855100 TACCTATTTAATTAA CCTCTCC GGATAA GGAGAGG TTTTTTGTTTAATAT TERM 2107 1855119 - 1855100 - T 78 -9.3 -3.3782 | opp_overlap 1855100 TACCTATTTAATTAA CCTCTCC GGATAA GGAGAGG TTTTTTGTTTAATAT THA_1855 1857537 - 1855492 - | hypothetical protein TERM 2108 1856132 - 1856152 + g 72 -4.1 -5.03145 | opp_overlap 1856137 GAATTTGAAGATATG TAATACTTT AAC AAAGGATTA TTTTTTGAAAAATTG TERM 2109 1857020 - 1857030 + g 76 -2.6 -5.54264 | opp_overlap 1857020 CCAAAAAGATAATAA TTTT CAA AAAA TTTTTTTACATGTTT THA_1856 1857977 - 1857534 - | hypothetical cytosolic protein THA_1857 1860450 - 1857967 - | DNA polymerase III subunit alpha THA_1858 1861088 - 1860447 - | rpe ribulose-phosphate 3-epimerase TERM 2110 1861209 - 1861189 - g 75 -4.1 -5.26316 | overlap 1861172 TGATTTTATAAAAAA TCAAATAAA AAT TTTACCTGA TATTGGATTAATATT TERM 2111 1861663 - 1861643 - g 85 -7.7 -4.74801 | GAATGGTATGAAAAA GTTAAGAAA GAG TTTCCTAAC TTAAAAGAAGGTGTC THA_1859 1861148 - 1861948 + | purine nucleoside phosphorylase I, inosine and guanosine-specific THA_1860 1861950 - 1862936 + | exopolyphosphatase family protein TERM 2112 1866025 - 1866010 - g 72 -2.6 -5.48213 | opp_overlap 1866011, overlap 1866004 TATTGAAAAGAAAAA TGATTT TTTG AAACCA TTTTTTGAAAAATCT TERM 2113 1866692 - 1866675 - g 71 -2.1 -5.41746 | gap 1, overlap 1866676 AAGTTTTGAAAAAAA TTGCTCAA ATT TTGAG-AA GAAATGTAAGGCTGA THA_1861 1862963 - 1866979 + | ggdef domain protein murB 1866969 - 1867862 + | UDP-N-acetylenolpyruvoylglucosamine reductase TERM 2114 1868968 - 1868946 - g 79 -7.7 -4.34402 | GGTTCTAGAGGAAAA GCAGGTGCT AGCGA AGCACATGC TGAAGTTGTAGCTCA THA_1863 1867875 - 1869212 + | aspartyl aminopeptidase THA_1864 1869217 - 1869639 + | transcriptional regulator, MarR family TERM 2115 1870507 - 1870527 + G 89 -4.1 -5.89827 | AAAATTTAATTTCCT CAGTTAA TAATTCT TTAACTG TTTTTTTTGATGGTT THA_1865 1869645 - 1871021 + | pega domain family TERM 2116 1871156 - 1871136 - g 70 -5.5 -4.3129 | opp_overlap 1871136, overlap 1871138 TATTCAGCAGTAAAA TTTTTGGTT GAA AACCAAATA ATGGATTTAGATGTA THA_1866 1871022 - 1872290 + | lipoprotein, putative TERM 2117 1873134 - 1873122 - g 77 -4.9 -5.26875 | opp_overlap 1873115 1873129 TTTGGAAGCAAAAAA TTTGA TTT TCAAA GATCTTTTGAATAAT THA_1867 1872319 - 1873689 + | hypothetical protein TERM 2118 1874383 - 1874419 + G 70 -8.9 -2.61199 | opp_overlap 1874384 1874385 1874411, overlap 1874382 AAAAAATCGAAAAAA ATTTTGGAGCCTTTT TAATACC AAAAGGCTCCAAAGA ATTCGTTAGAGATTC TERM 2119 1874418 - 1874384 - g 100 -10.2 -5.63857 | opp_overlap 1874383 1874382, overlap 1874385 1874411 AAAAATCGAAAAAAA TTTTGGAGCCTTTT TAATACC AAAAGGCTCCAAAG AATTCGTTAGAGATT TERM 2120 1874417 - 1874385 - g 100 -13.7 -3.94654 | opp_overlap 1874383 1874382, overlap 1874384 1874411 AAAATCGAAAAAAAT TTTGGAGCCTTTT TAATACC AAAAGGCTCCAAA GAATTCGTTAGAGAT THA_1868 1873686 - 1874474 + | phosphomannose isomerase type I THA_1869 1875324 - 1874443 - | hypothetical protein TERM 2121 1874646 - 1874626 - G 74 -7.7 -3.79906 | opp_overlap 1874626 TGAGTCGTAGAATAA TCTTCTAAA TTC TTCAGAAGA TTTTGGCAAAGAAGC acpP2 1875587 - 1875333 - | acyl carrier protein ruvB 1875721 - 1876731 + | holliday junction DNA helicase RuvB THA_1872 1876724 - 1877407 + | hypothetical protein THA_1873 1877428 - 1877727 + | yggt family, putative THA_1874 1877724 - 1878491 + | ATP-NAD kinase, putative TERM 2122 1878494 - 1878484 - f 72 -2.6 -5.44119 | GTTACGGTAAAAAAA TTTT ATA AAAA GGTGATGTATATGGA THA_1875 1878505 - 1879206 + | putative Phosphate transport system protein PhoU TERM 2123 1879396 - 1879407 + G 75 -4.4 -5.2894 | TTGCTTCATTGGGAA TTCC TGTA GGAA TTTTATTTTCTATTT TERM 2124 1882225 - 1882208 - g 75 -4.9 -5.02074 | opp_overlap 1882208 GTATTCTTTAAAAAA TCAAGAA AATT CTCTTGA TTTATCATACAAGAC THA_1876 1879203 - 1882535 + | putative permease, YjgP/YjgQ family rumA 1882551 - 1883873 + | 23S rRNA (uracil-5-)-methyltransferase RumA THA_1878 1883902 - 1884507 + | bifunctional purine biosynthesis protein PurH THA_1879 1884512 - 1885123 + | hypothetical protein THA_1880 1885137 - 1885364 + | flagellar biosynthesis THA_1881 1885370 - 1886293 + | pega domain family TERM 2125 1887026 - 1887058 + G 70 -8.5 -3.14211 | opp_overlap 1887026 1887028 1887030 ATTTACGTATAGATA CATATCGAGCATCTG GTG CAGGTGGTCAATATG TTAATAAAACAGAAT TERM 2126 1887232 - 1887217 - g 74 -6.2 -4.42235 | overlap 1887214 AAGCGGCAAAAACAA CTTGAA GAAA TTCAAG GCGAATTAAAAGATA prfB 1886308 - 1887417 + | peptide chain release factor 2 minD 1887429 - 1888232 + | septum site-determining protein MinD THA_1884 1888238 - 1888504 + | hypothetical protein THA_1885 1888531 - 1889154 + | hypothetical protein THA_1886 1889180 - 1889407 + | hypothetical protein THA_1887 1889404 - 1890186 + | hypothetical protein ftsY 1890191 - 1891075 + | signal recognition particle-docking protein FtsY TERM 2127 1891207 - 1891195 - g 72 -6.3 -4.29325 | opp_overlap 1891186 1891206, overlap 1891186 GATGAAGATTTAAAA CCAAA TTA TTTGG ATGTAAATCCTTTTT TERM 2128 1891206 - 1891217 + G 78 -4.4 -5.37043 | opp_overlap 1891195 1891186, overlap 1891186 AAAACCAAATTATTT GGAT GTAA ATCC TTTTTTATATGAAGT THA_1889 1891081 - 1891746 + | hypothetical protein THA_1890 1891725 - 1893320 + | 3D domain family THA_1891 1893324 - 1893770 + | Rrf2 family protein THA_1892 1893860 - 1894825 + | tRNA methyl transferase THA_1893 1894822 - 1895334 + | hpt hypoxanthine phosphoribosyltransferase TERM 2129 1895440 - 1895466 + G 95 -8.1 -5.46698 | opp_overlap 1895443, overlap 1895444 TTTATTGTCTGTAAT TTACTCTCCTC TTGAT GAGGAGACTAA TTTTTTGGTTTTGGG TERM 2130 1895444 - 1895462 + G 70 -8.9 -2.66808 | opp_overlap 1895443, overlap 1895440 TTGTCTGTAATTTAC TCTCCTC TTGAT GAGGAGA CTAATTTTTTGGTTT TERM 2131 1895621 - 1895605 - g 71 -6.7 -3.91946 | AATAAATAATTCAAA GATAAAT TCA ATTTATC AAAAAGAAGGATTAG THA_1894 1895339 - 1896505 + | membrane bound protein LytR, putative THA_1895 1897154 - 1896489 - | endonuclease V THA_1896 1897871 - 1897161 - | hypothetical protein THA_1897 1898691 - 1897876 - | radical SAM protein, family THA_1898 1900031 - 1898790 - | chlorohydrolase THA_1899 1900366 - 1900034 - | iojap family protein TERM 2132 1900325 - 1900335 + g 72 -2.6 -5.43866 | AGGTTCAATTGCTTC TTTT TCT AAAA TTTTTTTCCAAATTA THA_1900 1901673 - 1900411 - | folylpolyglutamate synthase/dihydrofolate synthase TERM 2133 1901446 - 1901469 + g 95 -11 -3.88559 | opp_overlap 1901446 AAGAATTGAAGATAA GTGGGGAGAT AGAT ATCCCCCCAC TTTATACCCATGATT TERM 2134 1901469 - 1901446 - G 100 -13.2 -3.73359 | opp_overlap 1901446 AAGAATTGAAGATAA GTGGGGAGAT AGAT ATCCCCCCAC TTTATACCCATGATT valS 1904279 - 1901685 - | valyl-tRNA synthetase TERM 2135 1904102 - 1904124 + g 73 -9.2 -2.59632 | opp_overlap 1904117, overlap 1904101 1904117 CTAAGATATCTTGAA GGGTTATGTT TAA AGCATGACCC ATGTGTATTTTTCCA THA_1902 1904688 - 1904272 - | diguanylate cyclase TERM 2136 1905407 - 1905393 - g 70 -4.4 -4.91429 | AAATTGTAAAGAAAA TTTTAA ATG TTAAAA ATGTGTATATAGGAA THA_1903 1904816 - 1906132 + | electron transport complex protein RnfC THA_1904 1906132 - 1907088 + | Na-translocating NADH-quinone reductase, Nqr2 subunit TERM 2137 1907475 - 1907461 - g 86 -2.9 -6.01369 | opp_overlap 1907471 TAAATAATAAAAAAA TTGAT CTTTT ATCAA TAAGGGTTATTGAAT TERM 2138 1907693 - 1907728 + G 73 -9.2 -2.60496 | gap 1, opp_overlap 1907691, overlap 1907692 1907701 AGCAACTATTACACC TCGAGCAGTTGCATCAA CTA TTGACGCAA-TGTTCGA ATATTTGCAAAAGGA THA_1905 1907085 - 1907753 + | electron transport complex, rnfabcdGe type, g subunit subfamily THA_1906 1907757 - 1908371 + | NADH-ubiquinone oxidoreductase THA_1907 1908368 - 1908943 + | Na-translocating NADH-quinone reductase, Nqr5 subunit TERM 2139 1909032 - 1909016 - f 74 -9.5 -2.62616 | TCAGGTGGTAGAGCA TCAGCTT CCC AAGCTGA GGGCCGCGGGTTCGA TERM 2140 1909067 - 1909084 + F 100 -9.1 -5.86061 | CGTCGCCCGCTCCAA CGGGGCT TAAA AGCCCTG TTTTTTTTAATAGAC TERM 2141 1910048 - 1910030 - g 72 -4.6 -4.87291 | opp_overlap 1910030 1910044, overlap 1910041 GATTTTAAGCAAAAA TTTTGGAA GTA CCCCAAAA TTATTTGGAATGTTT THA_1909 1909119 - 1910387 + | arsenic transporter family protein THA_1910 1910408 - 1911349 + | putative K+-dependent Na+/Ca+ exchanger TERM 2142 1911639 - 1911659 + G 80 -6.3 -4.91987 | opp_overlap 1911639, overlap 1911657 TTTGTCGGATGAAGA TTATGTAAA ATT TTTACGTAA TTTTATTATTAACTT THA_1911 1911379 - 1912263 + | hypothetical protein guaB 1912292 - 1913743 + | inosine-5'-monophosphate dehydrogenase TERM 2143 1913804 - 1913762 - T 82 -6.4 -5.11112 | opp_overlap 1913770 1913775, overlap 1913765 1913775 AAATTTGAATAAAAA TAATATTTTAAAACCAGCAC TCG GTGCTGGTTTTATTTTATTT AATTAATAATATAGT TERM 2144 1913801 - 1913765 - T 85 -8.1 -4.63592 | opp_overlap 1913770 1913775, overlap 1913762 1913775 TTTGAATAAAAATAA TATTTTAAAACCAGCAC TCG GTGCTGGTTTTATTTTA TTTAATTAATAATAT TERM 2145 1913770 - 1913796 + T 100 -16.8 -5.00851 | opp_overlap 1913765 1913762 1913775, overlap 1913775 ATAAAAATAATATTT TAAAACCAGCAC TCG GTGCTGGTTTTA TTTTATTTAATTAAT TERM 2146 1913775 - 1913791 + T 100 -12.3 -5.34857 | opp_overlap 1913765 1913762 1913775, overlap 1913770 AATAATATTTTAAAA CCAGCAC TCG GTGCTGG TTTTATTTTATTTAA TERM 2147 1913791 - 1913775 - T 100 -12.3 -4.21314 | opp_overlap 1913775 1913770, overlap 1913765 1913762 AATAATATTTTAAAA CCAGCAC TCG GTGCTGG TTTTATTTTATTTAA TERM 2148 1915767 - 1915719 - T 74 -6.4 -4.45261 | gap 2, opp_overlap 1915721 1915723 1915724 1915726 1915726 1915729, overlap 1915721 1915723 1915724 TAAAGAAATTTAAAA TATAGTTTAGTTTAAGGCCCCTTA GTT TAAGGGGCCTTAAA-TATA-TATC ATTTTTTTAGTCATT TERM 2149 1915721 - 1915768 + T 100 -8 -5.58074 | gap 1, opp_overlap 1915721 1915719 1915723 1915724, overlap 1915723 1915724 1915726 1915726 1915729 AAGAAATTTAAAATA TAGTTTA-GTTTAAGGCCCCTTA GTT TAAGGGGCCTTAAATATATATCA TTTTTTTAGTCATTC TERM 2150 1915765 - 1915721 - T 81 -9 -3.80537 | gap 2, opp_overlap 1915721 1915723 1915724 1915726 1915726 1915729, overlap 1915719 1915723 1915724 AAGAAATTTAAAATA TAGTTTAGTTTAAGGCCCCTTA GTT TAAGGGGCCTTAAA-TATA-TA TCATTTTTTTAGTCA TERM 2151 1915723 - 1915767 + T 77 -8.2 -3.93218 | gap 2, opp_overlap 1915721 1915719 1915723 1915724, overlap 1915721 1915724 1915726 1915726 1915729 GAAATTTAAAATATA G-TTTA-GTTTAAGGCCCCTTA GTT TAAGGGGCCTTAAATATATATC ATTTTTTTAGTCATT TERM 2152 1915764 - 1915723 - T 80 -9.7 -3.46399 | gap 1, opp_overlap 1915723 1915721 1915724 1915726 1915726 1915729, overlap 1915721 1915719 1915724 GAAATTTAAAATATA GTTTAGTTTAAGGCCCCTTA GTT TAAGGGGCCTTAAA-TATAT ATCATTTTTTTAGTC TERM 2153 1915763 - 1915724 - T 100 -13.2 -2.66755 | gap 1, opp_overlap 1915724 1915723 1915721 1915726 1915726 1915729, overlap 1915723 1915721 1915719 AAATTTAAAATATAG TTTAGTTTAAGGCCCCTTA GTT TAAGGGGCCTTAAA-TATA TATCATTTTTTTAGT TERM 2154 1915724 - 1915765 + T 91 -11.9 -3.53247 | gap 1, opp_overlap 1915723 1915721 1915719 1915724, overlap 1915723 1915721 1915726 1915726 1915729 AAATTTAAAATATAG TTTA-GTTTAAGGCCCCTTA GTT TAAGGGGCCTTAAATATATA TCATTTTTTTAGTCA TERM 2155 1915726 - 1915763 + T 100 -14.5 -3.3215 | gap 1, opp_overlap 1915724 1915723 1915721 1915719, overlap 1915724 1915723 1915721 1915726 1915729 ATTTAAAATATAGTT TA-GTTTAAGGCCCCTTA GTT TAAGGGGCCTTAAATATA TATCATTTTTTTAGT TERM 2156 1915726 - 1915761 + T 100 -15.8 -3.2027 | gap 1, opp_overlap 1915724 1915723 1915721 1915719, overlap 1915726 1915724 1915723 1915721 1915729 ATTTAAAATATAGTT TAGTTTAAGGCCCCTTA GTT TAAGGGGCCTTAAA-TA TATATCATTTTTTTA TERM 2157 1915729 - 1915759 + T 100 -20 -3.13042 | opp_overlap 1915724 1915723 1915721 1915719, overlap 1915726 1915726 1915724 1915723 1915721 TAAAATATAGTTTAG TTTAAGGCCCCTTA GTT TAAGGGGCCTTAAA TATATATCATTTTTT THA_1914 1916477 - 1915755 - | oxidoreductase TERM 2158 1916721 - 1916707 - g 70 -4.2 -4.87318 | GGTAAAATTGAAAAA TGGGGA ATT TCTCCA AAAAGATCAAACGAT THA_1915 1916563 - 1917996 + | maltodextrin glucosidase THA_1916 1918100 - 1918702 + | ubiquinone/menaquinone biosynthesis methyltransferase-related protein THA_1917 1919511 - 1918675 - | permeases of the drug/metabolite transporter THA_1918 1920842 - 1919565 - | arsenic transporter family protein TERM 2159 1920825 - 1920843 + g 70 -5.4 -4.64144 | opp_overlap 1920825 1920827 1920842, overlap 1920842 GAAAATAACTAATGA TATGATTT TAG GAATCATA TTTTTACACCTTCTT THA_1919 1921070 - 1922728 + | hcp hydroxylamine reductase TERM 2160 1922742 - 1922773 + F 100 -7.5 -6.19302 | gap 2, opp_overlap 1922747 1922748, overlap 1922749 AAGAATTTTTTATTC TAAAATTGGCGCTCG TTTT CGAGCGCC--TTTTA TTTTTTTTATTATAT TERM 2161 1922770 - 1922747 - f 79 -8 -4.13767 | opp_overlap 1922742 1922749, overlap 1922748 TTTTTTATTCTAAAA TTGGCGCTCG TTTT CGAGCGCCTT TTATTTTTTTTATTA TERM 2162 1922769 - 1922748 - f 87 -11.5 -3.08046 | opp_overlap 1922742 1922749, overlap 1922747 TTTTTATTCTAAAAT TGGCGCTCG TTTT CGAGCGCCT TTTATTTTTTTTATT TERM 2163 1922749 - 1922768 + F 100 -15 -5.69976 | opp_overlap 1922748 1922747, overlap 1922742 TTTTATTCTAAAATT GGCGCTCG TTTT CGAGCGCC TTTTATTTTTTTTAT THA_1920 1922837 - 1923571 + | L-aspartate dehydrogenase nadA 1923575 - 1924486 + | quinolinate synthetase complex, A subunit TERM 2164 1924538 - 1924578 + G 81 -9.9 -3.41757 | overlap 1924536 GATGAAGGCCTTATT GATTTTTCAGCTTATCCTT TAA AAGGGAAAGTTGCAAAATC TATTATAATTTTAAA TERM 2165 1924880 - 1924895 + G 77 -7.6 -4.18018 | CCTTTTGTTGGAGAT CTGCAA AAGA TTGCAG TTTTACATGGAGGAG nadC 1924490 - 1925305 + | nicotinate-nucleotide pyrophosphorylase TERM 2166 1925408 - 1925458 + T 100 -5.7 -6.28631 | gap 1 GAACTTGACTTATAG CACCAATACTAATTGTAAGTTGAA TGTT TTTTCCAT-CAATTAGTATTGGTG TTTTTTTTTACTTTC THA_1923 1925619 - 1925443 - | diguanylate cyclase with PAS/PAC sensor THA_1924 1926071 - 1925586 - | ggdef family protein THA_1926 1928999 - 1927674 - | beta-galactosidase TERM 2167 1929612 - 1929628 + G 71 -2.3 -5.37043 | opp_overlap 1929612 1929613, overlap 1929613 GTAAAATTCCTAAAA CTTCTTT TAA AAAGAAA TTTTTTATCTCAAGT TERM 2168 1929683 - 1929699 + G 75 -4.3 -5.22794 | overlap 1929686 TATGATGGTTTTTTT GGGCCTG GGA CAGGTAC TTTTTTGATAATTAT THA_1927 1929218 - 1929982 + | transporter TERM 2169 1930551 - 1930541 - g 72 -4 -5.02074 | TGACTCTCCAAAAAA CTAT GAC ATAG ACTATGTAGTAGCGT THA_1928 1930047 - 1930667 + | hypothetical protein THA_1929 1930703 - 1932097 + | succinyl-diaminopimelate desuccinylase TERM 2170 1932119 - 1932142 + F 100 -10.4 -5.65927 | GCTTAAACCTGTTGA TCCTCTACTA AATT TAGTAGGGGA TTTTTTATTTAAATG TERM 2171 1932361 - 1932371 + F 70 -4 -5.093 | TTACTAAAAAGATGC TTGT GTA ACAA TTTTATTATTTTAAA TERM 2172 1932951 - 1932938 - g 72 -6.7 -4.17958 | AAGACGTGCAACAAA CAGAG AATA CTCTG GAATTGATAACTTAT TERM 2173 1933617 - 1933632 + G 70 -9 -2.50988 | opp_overlap 1933615 1933612, overlap 1933616 1933615 ATGTGGAAAGTTATA CCTGGA TGGT TCCAGG CTATTAATGATGTAA THA_1930 1932414 - 1933826 + | bacterial extracellular solute-binding protein, putative TERM 2174 1933857 - 1933827 - f 95 -11.8 -3.73399 | opp_overlap 1933831, overlap 1933823 1933831 GAAAGTGAAAAGTAA TTTAGCCCCCCGAG TTA CTCGGGGAGCTTTA ATGATTAATAGGAGG TERM 2175 1933831 - 1933853 + F 100 -14.8 -3.85704 | opp_overlap 1933827 1933823 1933831 GTGAAAAGTAATTTA GCCCCCCGAG TTA CTCGGGGAGC TTTAATGATTAATAG TERM 2176 1933853 - 1933831 - f 100 -17 -2.66118 | opp_overlap 1933831, overlap 1933827 1933823 GTGAAAAGTAATTTA GCCCCCCGAG TTA CTCGGGGAGC TTTAATGATTAATAG TERM 2177 1935466 - 1935454 - g 81 -4.9 -5.38958 | overlap 1935463 ATTCACAAATAAAAA TGAAT ATT ATTCA GTGTATGAAAAGTCT TERM 2178 1935932 - 1935909 - g 74 -3.2 -5.46629 | gap 1, opp_overlap 1935930, overlap 1935910 AAGATGTGAAAAAAA TTCTTC-CTGA GAT TCAGCGAAGAG GTATGAACTTCTTTA THA_1931 1933880 - 1936774 + | bacterial extracellular solute-binding protein THA_1932 1936761 - 1937645 + | sugar ABC transporter permease, putative THA_1933 1937664 - 1938536 + | sugar ABC transporter permease THA_1934 1938552 - 1940543 + | tetratricopeptide repeat domain protein TERM 2179 1941134 - 1941112 - g 83 -2.1 -5.8901 | gap 1 AGAGAAAATAAAAAA TCTGGATATA TTTT TAT-CCCAGA TGGTCCAGGAGCATT THA_1935 1940533 - 1942773 + | hypothetical protein TERM 2180 1942919 - 1942929 + G 72 -5.4 -4.84642 | overlap 1942925 1942926 TTCACTGTTTCTGGT GTTG AAT CAAC TTTTGTTGGTTTAGA THA_1936 1942766 - 1943617 + | inner membrane protein TERM 2181 1944085 - 1944117 + G 86 -7.1 -5.16206 | opp_overlap 1944114, overlap 1944086 1944114 TTGCCTCATTTTTAC CTGCACTTTTTGGTC AGG GAATAAAAAGTGCAA TTTTTATATTGCTTT TERM 2182 1944086 - 1944116 + G 85 -10.6 -3.67283 | opp_overlap 1944114, overlap 1944085 1944114 TGCCTCATTTTTACC TGCACTTTTTGGTC AGG GAATAAAAAGTGCA ATTTTTATATTGCTT THA_1937 1943631 - 1944533 + | putative transport protein TERM 2183 1946022 - 1946032 + F 70 -4 -4.99035 | opp_overlap 1946022 GTAATATGGGATAAA GAAA AAA TTTC TTTTTATGTGGATGA THA_1939 1946250 - 1947251 + | transcriptional regulator, LacI family TERM 2184 1947800 - 1947811 + G 74 -3 -5.40072 | TGAAATCTCACTATG GAAT GTAG ATTC TTTTTTTAACGGAAC TERM 2185 1947859 - 1947849 - g 76 -5.4 -5.07486 | TATTGTCAAGAAAAA GGTA TTT TACC AATGGCTTGGTCCCC THA_1940 1947264 - 1948154 + | oxidoreductase YdhF THA_1941 1948177 - 1951236 + | hypothetical protein TERM 2186 1952555 - 1952521 - g 71 -4.5 -4.74504 | gap 1 AGTTTAATTTAAAAA TTCCTCCAAAACTACC AGAA GATA-TTTTGGATGAA AGTATGATTGATGAA THA_1942 1951254 - 1953413 + | beta-glucosidase TERM 2187 1953471 - 1953431 - T 95 -9.1 -5.27477 | opp_overlap 1953437, overlap 1953437 ACTTGAATGAAAAAA TGTAAATCCCCATCTCTCA TTA TGAAAGATGGGGATTTTTG TTTTTAAAGTCTTAA TERM 2188 1953437 - 1953465 + T 100 -14.7 -5.61881 | opp_overlap 1953431 1953437 ATGAAAAAATGTAAA TCCCCATCTCTCA TTA TGAAAGATGGGGA TTTTTGTTTTTAAAG TERM 2189 1953465 - 1953437 - T 100 -16.9 -4.06778 | opp_overlap 1953437, overlap 1953431 ATGAAAAAATGTAAA TCCCCATCTCTCA TTA TGAAAGATGGGGA TTTTTGTTTTTAAAG THA_1943 1954108 - 1953497 - | hypothetical protein TERM 2190 1954385 - 1954352 - R 100 -12.7 -3.73001 | opp_overlap 1954359, overlap 1954359 CAAAAAATGAAAAAC TAAAAAAGTTGGCTA AAAC TAGCCAACTTTTCCA TAAAAATTATATTTT TERM 2191 1954359 - 1954378 + r 100 -10.8 -4.18762 | opp_overlap 1954352 1954359 TGAAAAACTAAAAAA GTTGGCTA AAAC TAGCCAAC TTTTCCATAAAAATT TERM 2192 1954378 - 1954359 - R 100 -10.8 -5.54079 | opp_overlap 1954359, overlap 1954352 TGAAAAACTAAAAAA GTTGGCTA AAAC TAGCCAAC TTTTCCATAAAAATT THA_1944 1955459 - 1954428 - | muconate cycloisomerase TERM 2193 1955051 - 1955074 + g 81 -6.1 -5.0925 | opp_overlap 1955051 CTTCTAACGTACCAA TAGAAACGG TTTTAT CTGTTTCTA TTTTTCCTTTTGCAC THA_1945 1956793 - 1955474 - | hypothetical protein THA_1946 1957493 - 1956810 - | catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase TERM 2194 1956904 - 1956940 + g 71 -6.7 -3.87925 | opp_overlap 1956901 1956910 TTTGAAATTAAATCT TTGAAAGTTCTCGTA ACAGTTA TACGAGAACATCCAA TTATATTTGCTAATT TERM 2195 1956934 - 1956910 - G 77 -8.7 -3.59627 | opp_overlap 1956904, overlap 1956901 ATTAAATCTTTGAAA GTTCTCGTA ACAGTTA TACGAGAAC ATCCAATTATATTTG THA_1947 1958128 - 1957511 - | pcp pyrrolidone-carboxylate peptidase TERM 2196 1958181 - 1958171 - H 72 -2.6 -5.43487 | opp_overlap 1958171 1958166 1958180, overlap 1958164 AAATTATATAAAAAA TTTT AGA AAAA TTTTGTATCCTGGGA TERM 2197 1958182 - 1958203 + H 77 -8.9 -3.281 | opp_overlap 1958164 1958182, overlap 1958166 1958180 AAAATTTTAGAAAAA TTTTGTATC CTGG GATACAAAA TATTATACATTAAAA TERM 2198 1958203 - 1958182 - H 93 -8.9 -4.90296 | opp_overlap 1958166 1958182 1958180, overlap 1958164 AAAATTTTAGAAAAA TTTTGTATC CTGG GATACAAAA TATTATACATTAAAA TERM 2199 1958339 - 1958369 + H 100 -11.3 -3.99592 | gap 1, overlap 1958362 ATAATGAATTTGTTT GGTGGTGGCACAGT GGCA ATTGT-CCACCACC TTTGTCGTGGTAAAT TERM 2200 1958406 - 1958428 + H 100 -12 -6.11392 | opp_overlap 1958405 1958404, overlap 1958404 CTTATATGGACAATT GCCGGGCA GGTTTAA TGCCCGGC TTTTTTTATTTATTT TERM 2201 1959522 - 1959512 - g 72 -4 -5.14965 | opp_overlap 1959520, overlap 1959520 AGCTTTATTAAAAAA CAAT TTA ATTG AAGCTCAAACTTTTT THA_1948 1958466 - 1959728 + | hypothetical protein TERM 2202 1959848 - 1959832 - f 77 -2.9 -5.68023 | opp_overlap 1959834, overlap 1959834 TTATAATGAAAAAAA CACCTCT ATT AGTGGTA TTTTATAAATTCGGA THA_1949 1959939 - 1960223 + | hypothetical protein THA_1950 1961289 - 1961426 + | hypothetical protein THA_1951 1962522 - 1962671 + | hypothetical protein THA_1952 1963152 - 1963018 - | hypothetical protein THA_1953 1963680 - 1963525 - | hypothetical protein THA_1954 1963954 - 1963694 - | crispr-associated protein Cas2 THA_1955 1964952 - 1963957 - | cas crispr-associated protein Cas1 THA_1956 1965434 - 1964958 - | cas crispr-associated protein Cas4 TERM 2203 1965056 - 1965071 + g 71 -3.4 -5.33026 | TATCTTCTATCTCAC TTATTA AACC TAATAA TTTTTCTTTAACTTC TERM 2204 1965197 - 1965209 + g 76 -2.7 -5.63103 | ATTTAGCACTTTTAA TCATT TTC GATGA TTTTTTTACTTCAAC THA_1957 1967836 - 1965431 - | crispr-associated helicase Cas3 domain protein, putative TERM 2205 1966429 - 1966402 - G 72 -2.8 -5.47218 | CTTTATCTAAAAAAA CATAACTTGCTC TTTC AAACAATTTATG ATCTACAACATCAGG TERM 2206 1967451 - 1967430 - G 100 -13.1 -5.26918 | ATATCTGATAAAAAA CTGTGGTGT CTTG ACACCACAG TTGCAATAAGAAGCA THA_1958 1968587 - 1967814 - | cas crispr-associated protein Cas5 THA_1959 1969505 - 1968600 - | hypothetical protein THA_1960 1971213 - 1969519 - | hypothetical protein TERM 2207 1971156 - 1971171 + g 71 -4.8 -4.77983 | CTGGTTCTTCATTTT GAAAAT AGAA ATTTTC TTTTCTTAGTCTCTT THA_1961 1971960 - 1971226 - | cas crispr-associated protein Cas6 TERM 2208 1971505 - 1971515 + g 70 -5.4 -4.57912 | overlap 1971490 TTCCTTTTCAAAAGG GGTA TAA TACC TTGTTTTATTCTTTC TERM 2209 1971798 - 1971772 - G 70 -3.8 -5.04385 | CATATTTTTAAAAAA TTTTCCTCTTTC TAA AATAGAAGAAAA ACAAAAGAGTGAAAA TERM 2210 1972062 - 1972052 - R 74 -4 -5.13016 | opp_overlap 1972052, overlap 1972040 AATTAAAATTAAAAA TTTC AGA GAAA ATTTTGAAAAATTTT THA_1962 1972857 - 1972366 - | integral membrane protein TERM 2211 1972585 - 1972566 - G 71 -6.6 -3.96337 | opp_overlap 1972566 CTAAAAACCAGGAAA TATTCAAA ATAA TTTGAATA ATAAAAATACCAATT TERM 2212 1972739 - 1972718 - G 88 -5.9 -5.52384 | GGCGGACTAAAAAAA GGTTTGTTT AAAT AAACATACC ACGTATTAAATGGTT TERM 2213 1974483 - 1974494 + H 71 -3 -5.18297 | opp_overlap 1974471 AAATTCAAGATCCTG GAAA AACC TTTC TTTTATTTCTTCTTC TERM 2214 1975034 - 1975020 - g 73 -8.6 -3.09831 | TTGATTGGAAAACTA TTCCAG CCG CTGGAA GTTCCGAAGAAGCAA THA_1964 1974854 - 1976107 + | sugar ABC transporter THA_1965 1976123 - 1977430 + | hypothetical protein TERM 2215 1977463 - 1977428 - f 82 -7.6 -4.60746 | opp_overlap 1977433, overlap 1977433 TTAAAAATAGTAAAA TAGAATTGCGGGGG GGAACTTT CCCCCGCAATTTTG CAAACGAGAATTCCT TERM 2216 1977433 - 1977458 + F 100 -13.3 -4.07568 | opp_overlap 1977428 1977433 AATAGTAAAATAGAA TTGCGGGGGGG AACT TTCCCCCGCAA TTTTGCAAACGAGAA TERM 2217 1977458 - 1977433 - f 100 -11.9 -4.01992 | opp_overlap 1977433, overlap 1977428 AATAGTAAAATAGAA TTGCGGGGG GGAACTTT CCCCCGCAA TTTTGCAAACGAGAA THA_1966 1979178 - 1980152 + | transcriptional regulator, LacI family TERM 2218 1980276 - 1980294 + G 82 -5.4 -5.47218 | TTTGGCTGGTTATTC TTTCATTT TCG AAATGGAA TTTTTTTGGCTCCCC THA_1967 1980164 - 1981042 + | inner membrane protein THA_1968 1981039 - 1981869 + | sugar ABC transporter, permease protein TERM 2219 1981944 - 1981970 + G 72 -5.2 -4.72272 | opp_overlap 1981943 TATTTGCACCAAATC CAAATCACCTTT GGG AAAGTAGATTTG TTTTTAATCCAGCAG TERM 2220 1982471 - 1982451 - g 81 -8.3 -4.21936 | GGGATAATGTTAAAA TTGGTGCAG GAG CTCCACCAA TTAAAACTGAATATG THA_1969 1981892 - 1982776 + | glycosylase TERM 2221 1982801 - 1982817 + G 90 -7.2 -5.63517 | overlap 1982802 TAAGGTTGCAATAGT TGGCGC GGGGA GCGCCG TTTTTTCTTTAAGAA TERM 2222 1982802 - 1982816 + G 79 -8.5 -3.97026 | overlap 1982801 AAGGTTGCAATAGTT GGCGC GGGGA GCGCC GTTTTTTCTTTAAGA THA_1970 1982781 - 1984205 + | alpha-glucosidase TERM 2223 1984958 - 1984948 - g 76 -2.6 -5.63645 | TTAAAAGATAAAAAA TATT TAG AATA CGCAAAAAAAGCTCT THA_1971 1984210 - 1986174 + | hypothetical protein THA_1972 1986679 - 1986140 - | 3-oxoacyl-[acyl-carrier protein] reductase TERM 2224 1986789 - 1986808 + H 100 -13.6 -6.06723 | opp_overlap 1986769 ATAAAAAACTTTTAT TCCCGCAC AAAT GTGCGGGA TTTTTTTTTACAAAA THA_1973 1986882 - 1987226 + | transcriptional regulator HTH-type, ArsR family arsB 1987231 - 1988268 + | arsenical-resistance protein THA_1975 1988309 - 1989088 + | Ser/Thr protein phosphatase family protein THA_1976 1989107 - 1989871 + | short-chain dehydrogenase/reductase SDR TERM 2225 1989955 - 1989939 - f 71 -5.3 -4.6575 | opp_overlap 1989934, overlap 1989934 ATATAAATCATAAAA TTTTTAT TAT ATAAAAA AATTTAAATTCATGT TERM 2226 1990917 - 1990931 + G 76 -9.2 -3.14132 | opp_overlap 1990912 TAGGTCAAAGGCCAG GCCCGG CTA CTGGGC TTCCTACAAGAACAG THA_1977 1990034 - 1991704 + | 2-oxoacid ferredoxin oxidoreductase, alpha subunit TERM 2227 1992153 - 1992198 + G 100 -10.7 -4.15044 | opp_overlap 1992193 TGATGGAGTTTATAT TGATCCATTTAATCCGATTGC TGTT GCAGTTGCATTAAATGCATCA TTTGTTGCCAGAACG THA_1978 1991704 - 1992501 + | ferrodoxin oxidoreductase beta subunit THA_1979 1992517 - 1992837 + | hypothetical protein THA_1980 1992929 - 1992804 - | hypothetical protein THA_1981 1993327 - 1993109 - | hypothetical protein TERM 2228 1993275 - 1993291 + g 76 -6.7 -4.37247 | opp_overlap 1993265 1993264 ATAACTAGCAGTGTG CTAAAAA GTC TTTTTAG TTTCTTGCTTACTTT THA_1982 1993812 - 1994681 + | hypothetical protein THA_1983 1995479 - 1994658 - | integrase, catalytic region TERM 2229 1995876 - 1995908 + r 100 -7.8 -6.12328 | opp_overlap 1995875 1995874 1995865 1995878, overlap 1995878 AAAATAAAACAAATT TACTCCCCCTTT TTATATATC AAAGGGGGAGAA TTTTTTTTATGTTAT TERM 2230 1995878 - 1995906 + r 83 -10.4 -3.11802 | opp_overlap 1995875 1995874 1995865 1995878, overlap 1995876 AATAAAACAAATTTA CTCCCCCTTT TTATATATC AAAGGGGGAG AATTTTTTTTATGTT TERM 2231 1995906 - 1995878 - R 81 -10.4 -2.87146 | opp_overlap 1995878 1995876, overlap 1995875 1995874 1995865 AATAAAACAAATTTA CTCCCCCTTT TTATATATC AAAGGGGGAG AATTTTTTTTATGTT THA_1984 1996609 - 1995920 - | hypothetical protein TERM 2232 1996103 - 1996120 + g 81 -2.8 -5.70829 | GTAAAAGTCATTTTG TTTGAT CAAAGT ATCAAA TTTTTTTCTAGTATT TERM 2233 1996211 - 1996227 + g 80 -2.3 -5.66868 | ACCATTGTAGAGACC TAAAGAT TTC ATCTTGA TTTTTTTACTTGATT TERM 2234 1997980 - 1997996 + G 74 -9.5 -2.83082 | overlap 1997982 TTTGGAAAGATTGGG GACAAGT AAA ACTTGTC TATGATGAACTTTTT THA_1985 1996887 - 1998095 + | extracellular solute-binding protein, family 1 TERM 2235 1998108 - 1998124 + F 93 -10.8 -3.96216 | opp_overlap 1998105 TAAAAATAAATTTTT GGGGGC TGCAT GCCCCC TTATTTAAATGAGAG THA_1986 1998150 - 1999019 + | sugar transport membrane protein THA_1987 1999021 - 2000301 + | sugar abc transporter, permease protein THA_1988 2000330 - 2001427 + | sugar ABC transporter, ATP-binding protein THA_1989 2001427 - 2002734 + | glycosyl transferase, group 1 family protein THA_1990 2002731 - 2003603 + | transcriptional regulator, RpiR family TERM 2236 2003677 - 2003700 + F 100 -11 -4.33417 | overlap 2003681 AGCATACTGATTCTT CTAACCGTGC TTTT GCACGGTTTG TTTATTATAACTACA TERM 2237 2003681 - 2003696 + F 95 -10.4 -4.73677 | overlap 2003677 TACTGATTCTTCTAA CCGTGC TTTT GCACGG TTTGTTTATTATAAC TERM 2238 2003744 - 2003770 + F 100 -13.8 -5.40464 | opp_overlap 2003745, overlap 2003745 ATGTGTAATAATGAA AGGGCTTTGGTA TAA TACCAAAGCCCG TTTTTGTTTATACTA TERM 2239 2003769 - 2003745 - f 100 -17.3 -4.07618 | opp_overlap 2003744 2003745 TGTGTAATAATGAAA GGGCTTTGGTA TAA TACCAAAGCCC GTTTTTGTTTATACT TERM 2240 2003745 - 2003769 + F 100 -17.3 -3.82652 | opp_overlap 2003745, overlap 2003744 TGTGTAATAATGAAA GGGCTTTGGTA TAA TACCAAAGCCC GTTTTTGTTTATACT TERM 2241 2003858 - 2003833 - f 89 -7.8 -4.96501 | opp_overlap 2003833 TTCTAGAAAAACAAA TGCAATATAA GAAACA TTATATTGCA TTATTCTATCGATAT TERM 2242 2003833 - 2003858 + F 74 -7.8 -3.90092 | opp_overlap 2003833 TTCTAGAAAAACAAA TGCAATATAA GAAACA TTATATTGCA TTATTCTATCGATAT THA_1991 2004381 - 2004740 + | hypothetical protein TERM 2243 2005030 - 2005069 + F 100 -14.6 -4.13304 | opp_overlap 2005036, overlap 2005036 CAAACTTTTTAGTTA TCAAAAGCTCCATGAATT GTCC AATTCGTGGAGCTTTTTA TTTTAGGGGTAATTT TERM 2244 2005063 - 2005036 - f 100 -11.4 -4.2828 | opp_overlap 2005030 2005036 TTTTAGTTATCAAAA GCTCCATGAATT GTCC AATTCGTGGAGC TTTTTATTTTAGGGG TERM 2245 2005036 - 2005063 + F 100 -13.6 -5.45802 | opp_overlap 2005036, overlap 2005030 TTTTAGTTATCAAAA GCTCCATGAATT GTCC AATTCGTGGAGC TTTTTATTTTAGGGG THA_1992 2005218 - 2005376 + | hypothetical protein TERM 2246 2005674 - 2005695 + G 76 -3.9 -5.40004 | overlap 2005671 TGTTAATGTTGGTTA TTTTATTTT AGAT AAAATAGAA TTTTTTGGTTTACTA THA_1993 2005492 - 2005983 + | hypothetical protein THA_1994 2006110 - 2006592 + | integral membrane protein TERM 2247 2006756 - 2006781 + T 72 -4.9 -4.88407 | opp_overlap 2006757 2006758, overlap 2006758 GCTATTTAATAAAAA TGTCTTTATTT TAGA AAATAAAGATG TTTTTAATTCCCTGA TERM 2248 2006758 - 2006779 + T 77 -7.5 -4.06004 | opp_overlap 2006757 2006758, overlap 2006756 TATTTAATAAAAATG TCTTTATTT TAGA AAATAAAGA TGTTTTTAATTCCCT THA_1995 2008029 - 2006866 - | transporter, major facilitator family TERM 2249 2007809 - 2007795 - G 85 -2.9 -5.83211 | CACCAAAAGAAAAAA TAACT CCTGC AGTTA AAACCACATTAAATG THA_1996 2008230 - 2008469 + | hypothetical protein TERM 2250 2009679 - 2009704 + T 83 -10.7 -3.11291 | overlap 2009670 2009684 TAAAATTTTTACTTG TGCAATATAAT AACT ATTATATTGCA TATTAGAATTCTAAC TERM 2251 2009732 - 2009747 + T 85 -9 -4.03137 | opp_overlap 2009732 AACAAAAAATAAAAA GGAGTC TAAA GACTCC TTTCATTCATTATAT TERM 2252 2009747 - 2009732 - T 100 -9 -5.84011 | opp_overlap 2009732 AACAAAAAATAAAAA GGAGTC TAAA GACTCC TTTCATTCATTATAT THA_1997 2009918 - 2009769 - | hypothetical protein THA_1998 2010949 - 2010257 - | hypothetical protein THA_1999 2014003 - 2011070 - | type III restriction enzyme R protein THA_2000 2016648 - 2014009 - | modification methylase, type III R/M system TERM 2253 2014246 - 2014266 + g 70 -5.5 -4.32034 | opp_overlap 2014246 2014248, overlap 2014242 2014248 TGGTGATCTCATGAA TATGTATTC ATT GAATACATC TTTTCCTGGTGATGG TERM 2254 2014248 - 2014264 + g 77 -8.1 -3.76141 | opp_overlap 2014246 2014248, overlap 2014242 2014246 GTGATCTCATGAATA TGTATTC ATT GAATACA TCTTTTCCTGGTGAT TERM 2255 2014264 - 2014248 - G 70 -8.1 -3.14602 | opp_overlap 2014242 2014248 2014246, overlap 2014246 GTGATCTCATGAATA TGTATTC ATT GAATACA TCTTTTCCTGGTGAT TERM 2256 2014824 - 2014837 + g 72 -2.5 -5.3689 | opp_overlap 2014824 TTTTGTTAATAAGAA TTTTA TTTT TAAAA TTTTCTTTTGTTTCT