TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.535777 %AT, 1728784 nt, 9946 terms. Intergenic: 0.566642 %AT, H2T: 193815 nt, 600 terms; T2T: 54147 nt, 583 terms; H2H: 50052 nt, 766 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|170287807|ref|NC_010483.1| Thermotoga sp. RQ2, complete genome (length 1877693) TERM 1 355 - 333 - g 74 -5.5 -4.63218 | opp_overlap 317 314, overlap 317 335 CGCTCGTGAAGAAAA GAGCGGTGC TTCTC ACACCGCTG AATCCCGATTACACT TERM 2 353 - 335 - g 74 -8.1 -3.93367 | opp_overlap 317 314, overlap 317 333 CTCGTGAAGAAAAGA GCGGTGC TTCTC ACACCGC TGAATCCCGATTACA TERM 3 905 - 923 + G 77 -11.8 -2.80077 | overlap 908 GAAATTGAACACGGT GAACTTCC TGA GGAAGTTC TGAATTTTGTCGCAG TRQ2_0001 62 - 1384 + | chromosomal replication initiator protein DnaA TRQ2_0002 2302 - 1361 - | tRNA (guanine-N(7)-)-methyltransferase TRQ2_0003 3153 - 2293 - | radical SAM domain-containing protein TERM 4 3189 - 3168 - R 72 -5.8 -4.57073 | CAGCCTCTTCAAAAA GTACTCGG CGTCGT CCGCGTAC TCACTATCTGGGAAG TRQ2_0004 4283 - 3150 - | TPR repeat-containing protein TRQ2_0005 5782 - 4280 - | carbohydrate kinase, YjeF related protein TERM 5 4867 - 4879 + g 78 -4.8 -5.08178 | opp_overlap 4860, overlap 4858 4871 CCTGAAGATTCTGCA GGCT GAAGA AGCC TTTTTCTGTATCTAT TERM 6 5501 - 5514 + g 91 -2.3 -5.95539 | AAGACCGTAGTTGTA CTCAC AATC GGGAG TTTTTTTCTTTCCAA TRQ2_0006 6246 - 5782 - | lytic transglycosylase catalytic TRQ2_0007 7322 - 6243 - | iron-containing alcohol dehydrogenase TRQ2_0008 7749 - 7333 - | OsmC family protein TERM 7 7635 - 7668 + g 87 -9.5 -4.22214 | opp_overlap 7637 TGAGGACGAGCTCAA GAGGTCGGGGGGCAG CGTC TTTTCCCCCAACCTC TTCTTTTGCATCCAT TRQ2_0009 9744 - 7759 - | methyl-accepting chemotaxis sensory transducer TERM 8 9702 - 9683 - G 72 -2.8 -5.06585 | overlap 9693 TAAATGAGATAAAAA CTAACAAG GAGT CCTGCCAG AACAACCAGTATAAC TRQ2_0010 10708 - 9779 - | phosphate transporter TERM 9 10017 - 10031 + g 74 -5.8 -4.57073 | opp_overlap 10017 AGAGAAGTAAAGTGA TCTAAT TCT ATTAGA TTTTTCCCCACCGTC TERM 10 10584 - 10597 + g 81 -8.1 -4.52857 | overlap 10583 ATCACGAAAATGCTC GCCAC TATG GTGGC TTTTCTGTAAGAAAT TERM 11 10945 - 10966 + H 100 -11.5 -5.71712 | opp_overlap 10931, overlap 10946 ACCCCCCACGGCCTT GGCGGGCTC GAAA GAGCCCGCA TTTTTTTGTATAAAA TERM 12 10946 - 10965 + H 100 -15 -4.01943 | opp_overlap 10931, overlap 10945 CCCCCCACGGCCTTG GCGGGCTC GAAA GAGCCCGC ATTTTTTTGTATAAA TRQ2_0011 11049 - 11903 + | hypothetical protein TERM 13 12424 - 12440 + GF 70 -6.5 -4.16146 | opp_overlap 12411 AAGAATGGAGTTTTG CCCATCC ACC GGATGAG TTTTGAACCTGTTTT TRQ2_0012 11890 - 12606 + | ribonuclease H TERM 14 12675 - 12661 - gf 73 -2.8 -5.07107 | CAAACTCTTAAAAAA GTATCT TGA AGATGC TGACGATATCGAGTC TRQ2_0013 12557 - 13198 + | hypothetical protein TRQ2_0014 13200 - 13967 + | MazG family protein TRQ2_0015 13964 - 14953 + | PpiC-type peptidyl-prolyl cis-trans isomerase TERM 15 15399 - 15385 - g 72 -5.7 -4.4009 | overlap 15388 GCTCAGCTCATAAAA GATGG ATCGA CCATC CTCACTCACTGCAAC TRQ2_0016 14950 - 15981 + | aIF-2BI family translation initiation factor TERM 16 16360 - 16350 - gf 73 -4.6 -4.78597 | TGAAGAAGAAACAAA CCCC ACG GGAG AATTGGTTTATTTTA TRQ2_0017 15985 - 16755 + | flagellar biosynthetic protein FliR TERM 17 16859 - 16831 - gf 73 -10.3 -2.98453 | overlap 16830 16834 GAGTAAGAGAAGAAG GTAGAGCTCCC GTATCCA GGGAGCTCAAC ATGGCCGTCACCTTT TERM 18 16856 - 16834 - gf 74 -10.6 -2.71335 | overlap 16831 16830 TAAGAGAAGAAGGTA GAGCTCCC GTATCCA GGGAGCTC AACATGGCCGTCACC TRQ2_0018 16686 - 17810 + | flagellar biosynthetic protein FlhB TERM 19 18767 - 18749 - g 72 -8.8 -3.61398 | GCCGTTCCTCAAGAA GAGCTGGT GGG ACCTGCTC CTGCAGAAAGACCCG TERM 20 18946 - 18929 - g 95 -11.3 -4.4648 | opp_overlap 18940 ACTTCCATCAGAAAA CAGCTCG CGTT CGAGCTG GGACTCGTCGTTTCC TERM 21 19704 - 19694 - g 75 -3.2 -5.16237 | AATCTGATGAAAAAA GGCT ATC AACC TGTGATTGTGTGTTC TRQ2_0019 17807 - 19843 + | flagellar biosynthesis protein FlhA TRQ2_0020 19840 - 20976 + | GTP-binding signal recognition particle TRQ2_0021 20942 - 21769 + | cobyrinic acid ac-diamide synthase TRQ2_0022 21776 - 22465 + | type IV pilus assembly PilZ TRQ2_0023 22462 - 23076 + | CheC, inhibitor of MCP methylation TERM 22 23345 - 23331 - g 71 -7 -4.05402 | opp_overlap 23330 23331 CTGGAAGCAAAAATA GCGGGC GGA GCCAGC ATGTTTGAATCTACG TRQ2_0024 23073 - 23546 + | hypothetical protein TRQ2_0025 23546 - 24208 + | RNA polymerase, sigma 28 subunit, FliA/WhiG TRQ2_0026 24192 - 24497 + | hypothetical protein TRQ2_0027 24494 - 24976 + | hypothetical protein TERM 23 25438 - 25409 - g 95 -2.9 -6.02914 | gap 1, opp_overlap 25410, overlap 25411 25414 TCGACAGAAAAAAAA TA-GAAGGAGCACT GAA AGTGCTCCTGAATA GTCTGAAAGATAGAA TERM 24 25435 - 25411 - g 80 -7.1 -4.65669 | opp_overlap 25410, overlap 25409 25414 GACAGAAAAAAAATA GAAGGAGCACT GAA AGTGCTCCTGA ATAGTCTGAAAGATA TERM 25 25432 - 25414 - g 95 -13.2 -4.36984 | opp_overlap 25410, overlap 25411 25409 AGAAAAAAAATAGAA GGAGCACT GAA AGTGCTCC TGAATAGTCTGAAAG TRQ2_0028 24961 - 25626 + | hypothetical protein TRQ2_0029 25840 - 25610 - | hypothetical protein TRQ2_0030 26115 - 25840 - | stage V sporulation protein S TRQ2_0031 27189 - 26179 - | galactose-1-phosphate uridylyltransferase TERM 26 27136 - 27155 + g 74 -3.5 -4.91511 | CCTTTTCGCTCTCTC GGTGGCT ATGATA ACCCACC TTTTTATAATGGGAT TRQ2_0032 28654 - 27194 - | glycogen/starch synthase, ADP-glucose type TERM 27 27751 - 27762 + g 71 -7.2 -4.07618 | GTCTGCTTATCAACC CGGC TACA GCCG TTTCCTTGTTAACGG TRQ2_0033 29274 - 28651 - | beta-lactamase domain-containing protein TERM 28 28856 - 28844 - G 73 -4.1 -4.79352 | GTATCGAGAAGAAAA GAAAG GTG CTCTC TGGCGTGCCATGGGG TERM 29 28870 - 28882 + g 76 -7.7 -4.35327 | TCTGGCGTGCCATGG GGTGT GAA ACACC TTTACTTTTTCATCG TRQ2_0034 30000 - 29287 - | bacitracin resistance protein BacA TERM 30 29601 - 29586 - G 82 -6.8 -4.90217 | GAAAGAGAGCAAAAA GCTGGG CAAT CCCAAC AAGAAGGGCATCGAG TRQ2_0035 30607 - 30002 - | CBS domain-containing protein TERM 31 30582 - 30592 + g 87 -6.8 -5.22943 | ACCATCGGGAAGTCC TGGG TGA CCCA TTTTTTGACTTTCAT TRQ2_0036 31638 - 30604 - | 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase TRQ2_0037 33140 - 31635 - | peptidase M50 TERM 32 32877 - 32895 + g 81 -5.3 -5.10033 | overlap 32868 32867 32889 AAATCTCTGCCAAGC GGGTTTC GCGTA GAAACTC TTTTCTTTCTCTTCC TRQ2_0038 34228 - 33116 - | 1-deoxy-D-xylulose 5-phosphate reductoisomerase TERM 33 33227 - 33237 + g 74 -5.4 -4.61868 | opp_overlap 33227, overlap 33220 TGGATATCCTTGAAA CTCT TCG AGAG TTTTCTCTATCACTC TERM 34 33492 - 33506 + g 71 -10 -3.13919 | overlap 33494 GGTATTCTCATATCC GGTGGT GAT ACCACC ATTTTGACGTTTCCA TERM 35 33494 - 33507 + g 72 -6.7 -4.24404 | overlap 33492 TATTCTCATATCCGG TGGTG ATAC CACCA TTTTGACGTTTCCAT TERM 36 34073 - 34085 + g 72 -4.8 -4.67234 | GAACTCCACATCACC CGTG ACCGC CACG TTTTTCACGTTGAAT TRQ2_0039 34833 - 34225 - | thiamine pyrophosphokinase TRQ2_0040 34898 - 35308 + | methylated-DNA--protein-cysteine methyltransferase TRQ2_0041 35305 - 37236 + | glycosyl transferase family protein TRQ2_0042 37240 - 37797 + | hypothetical protein TRQ2_0043 39106 - 37763 - | radical SAM domain-containing protein TERM 37 38827 - 38843 + g 72 -8.7 -3.76835 | ACTCCAGAAACTCTG GAGGTGC TCC GTACCTC TTATATCTTCTTGGA TRQ2_0044 39843 - 39103 - | Baf family transcriptional activator TERM 38 39139 - 39165 + g 74 -5.8 -4.55673 | overlap 39142 GTACACCCCCTTGAT CGTGAGGTCCTC ATC GAAGATCTCGTG TTTTATCATATCTTT TERM 39 39355 - 39329 - G 80 -6.6 -4.77165 | opp_overlap 39328 TTTCCTACAACAAAA TCCGCTGGTT TTACCTC AACGAGCGGA AGTTTTGCCGTCCCC TRQ2_0045 39979 - 41271 + | O-acetylhomoserine/O-acetylserine sulfhydrylase TRQ2_0046 41276 - 42190 + | homoserine O-succinyltransferase TERM 40 42189 - 42212 + F 100 -15.4 -4.74706 | opp_overlap 42192 42195 TGGAAGACATCCACT GAAGAACCCC TTTC GGGGTTCTTC TTTTTCCATGTTAGA TERM 41 42209 - 42192 - f 79 -11.3 -3.09759 | opp_overlap 42189, overlap 42195 AAGACATCCACTGAA GAACCCC TTTC GGGGTTC TTCTTTTTCCATGTT TERM 42 43231 - 43214 - g 82 -6.9 -4.82863 | overlap 43215 GAAGGACAAAATAAA CCCGCTC ATAG GAGCGGC TGGCGTTTCTGCCGT TERM 43 43230 - 43215 - g 79 -10.4 -3.48091 | overlap 43214 AAGGACAAAATAAAC CCGCTC ATAG GAGCGG CTGGCGTTTCTGCCG TRQ2_0047 42267 - 43391 + | sodium ion-translocating decarboxylase, beta subunit TRQ2_0048 43403 - 43600 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein TRQ2_0049 43593 - 44747 + | pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein TRQ2_0050 44803 - 46092 + | phosphopyruvate hydratase TERM 44 46124 - 46093 - f 79 -9.4 -3.80279 | opp_overlap 46096 46097, overlap 46095 46096 46100 TCTATAAAGAGATAA CACCGAAGGCCCAC CTTG GTGGGCCTTCATTT TGTTGAGGTGGTTTC TERM 45 46122 - 46095 - f 88 -12 -3.47615 | opp_overlap 46096 46097, overlap 46093 46096 46100 TATAAAGAGATAACA CCGAAGGCCCAC CTTG GTGGGCCTTCAT TTTGTTGAGGTGGTT TERM 46 46096 - 46121 + F 100 -13.3 -4.66318 | opp_overlap 46096 46095 46093 46100, overlap 46097 ATAAAGAGATAACAC CGAAGGCCCAC CTTG GTGGGCCTTCA TTTTGTTGAGGTGGT TERM 47 46121 - 46096 - f 93 -15.5 -2.67485 | opp_overlap 46096 46097, overlap 46095 46093 46100 ATAAAGAGATAACAC CGAAGGCCCAC CTTG GTGGGCCTTCA TTTTGTTGAGGTGGT TERM 48 46097 - 46120 + F 100 -16.8 -3.39068 | opp_overlap 46096 46095 46093 46100, overlap 46096 TAAAGAGATAACACC GAAGGCCCAC CTTG GTGGGCCTTC ATTTTGTTGAGGTGG TERM 49 46117 - 46100 - f 86 -12.7 -3.23585 | opp_overlap 46097 46096, overlap 46096 46095 46093 AGAGATAACACCGAA GGCCCAC CTTG GTGGGCC TTCATTTTGTTGAGG TRQ2_0051 46143 - 47063 + | cation diffusion facilitator family transporter TERM 50 47120 - 47108 - g 71 -3.4 -4.90477 | overlap 47111 TACAAAAAAGGAAAA GAAC TCGGC GTTC TCGAGAAGAAAATGA TRQ2_0052 47060 - 47536 + | hypothetical protein TRQ2_0053 47546 - 48166 + | peptidase M22 glycoprotease TERM 51 48172 - 48159 - T 100 -9.5 -5.55855 | opp_overlap 48159 GGGAAAAAAAGAAAA GGGGC TAAC GCCCC TTACTGAACCTTCTC TERM 52 48159 - 48172 + T 72 -9.5 -3.17219 | opp_overlap 48159 GGGAAAAAAAGAAAA GGGGC TAAC GCCCC TTACTGAACCTTCTC TRQ2_0054 50551 - 48173 - | ATPase TERM 53 48342 - 48352 + g 78 -5.4 -4.83615 | overlap 48334 CTTGCACCGAACGTT GGAT CGT ATCC TTTTTCTGCGAGGTA TERM 54 49090 - 49100 + g 74 -5.4 -4.67641 | overlap 49084 GGATTATCTCTTCGA GCTT CAG AAGC TTTTCCTTTTCAGAT TRQ2_0055 50806 - 51705 + | S-adenosyl-methyltransferase MraW TERM 55 51871 - 51860 - g 89 -5.8 -5.77677 | CAAAACAATAAAAAA CTCG AAAT CGAG ATCAAAGAACTGGAG TRQ2_0056 51773 - 51961 + | hypothetical protein TERM 56 51997 - 52009 + G 79 -7.7 -4.49314 | overlap 51981 GTTGTGGCTGTTGCT CGCAA TCT TTGCG TTATTTTTGATGGTC TERM 57 53374 - 53388 + G 74 -3.5 -5.02074 | CAGGAATCTCTATCA CTCAC TTTTT GTGGG TTTTTTCCCCGCTGA TERM 58 53668 - 53636 - g 100 -11.4 -4.75518 | gap 1 GAGATAAAAGGAAAA GGGTGGAAGGTGTCT GAAC AAACACC-CCCACCC AATCATCCTCTTGAA TRQ2_0057 51971 - 53719 + | peptidoglycan glycosyltransferase TRQ2_0058 54663 - 53710 - | thioredoxin reductase TRQ2_0059 55335 - 54670 - | glutaredoxin-like domain-containing protein TRQ2_0060 55847 - 55365 - | hypothetical protein TRQ2_0061 56761 - 55844 - | band 7 protein TRQ2_0062 57197 - 56775 - | hypothetical protein TRQ2_0063 58052 - 57210 - | ribonuclease Z TRQ2_0064 58498 - 58049 - | ribosomal protein L9 TERM 59 58260 - 58272 + g 73 -4.1 -4.83715 | overlap 58261 TCACCTGCTTTGACC TTCAC AAC GTGAG TTCTTTTTTTCAATT TERM 60 59154 - 59142 - g 71 -3.3 -4.86029 | ATAAAGAACATAAAA CCTTC CTG GAGGG GAGAACTCGAGATAA TRQ2_0065 58581 - 59648 + | glucose-1-phosphate thymidyltransferase TERM 61 59647 - 59677 + T 100 -11.2 -4.51196 | opp_overlap 59653, overlap 59650 59653 GTCGGGTGGAGCTTT AAAAAAGAGGGGCT TTG AGCCCCTCTTATTG TTTTGTCCATTTCAC TERM 62 59650 - 59674 + T 100 -12.9 -4.35693 | opp_overlap 59653, overlap 59647 59653 GGGTGGAGCTTTAAA AAAGAGGGGCT TTG AGCCCCTCTTA TTGTTTTGTCCATTT TERM 63 59671 - 59653 - T 100 -14.6 -5.03314 | opp_overlap 59650 59647 59653 TGGAGCTTTAAAAAA GAGGGGCT TTG AGCCCCTC TTATTGTTTTGTCCA TERM 64 59653 - 59671 + T 100 -14.6 -4.26938 | opp_overlap 59653, overlap 59650 59647 TGGAGCTTTAAAAAA GAGGGGCT TTG AGCCCCTC TTATTGTTTTGTCCA TRQ2_0066 60553 - 59672 - | protein-export membrane protein SecF TRQ2_0067 61947 - 60550 - | protein-export membrane protein SecD TRQ2_0068 62301 - 61951 - | preprotein translocase, YajC subunit TRQ2_0069 62800 - 62294 - | hypothetical protein TRQ2_0070 63683 - 62802 - | riboflavin biosynthesis protein RibF TERM 65 63485 - 63466 - G 83 -6.4 -5.03314 | overlap 63467 TTTATTCTGAAAAAA TCCAGAAC AACG GTTCTGGC GTAACGAGAAAGCAT TERM 66 63484 - 63467 - G 75 -9.9 -3.61506 | overlap 63466 TTATTCTGAAAAAAT CCAGAAC AACG GTTCTGG CGTAACGAGAAAGCA TRQ2_0071 64618 - 63689 - | tRNA pseudouridine synthase B TRQ2_0072 65010 - 64615 - | ribosome-binding factor A TRQ2_0073 65901 - 65023 - | metal dependent phosphohydrolase TERM 67 65544 - 65554 + gr 71 -6.8 -4.1196 | opp_overlap 65543 65544 CACTCGCTATGAAAT GCTC CCA GAGC TTTTCACGATCGATT TRQ2_0074 67327 - 65849 - | histidine kinase TRQ2_0075 68342 - 67335 - | Sua5/YciO/YrdC/YwlC family protein TERM 68 68392 - 68375 - H 91 -10.5 -4.84146 | opp_overlap 68375 ATGATACAAAATAAA GGGGCCC TTCG GAGCCCC TTCTGGTGCCGAGGG TERM 69 68375 - 68392 + H 71 -9.1 -3.40403 | gap 1, opp_overlap 68375 ATGATACAAAATAAA GGGGC-CC TTC GGAGCCCC TTCTGGTGCCGAGGG TERM 70 68731 - 68716 - g 100 -5.4 -5.8901 | overlap 68717 ATAGAAAATAAAAAA CCTGTG AGCT CACAGA GAGTTCTGGAAGTGA TRQ2_0076 68611 - 69627 + | heat-inducible transcription repressor HrcA TRQ2_0077 69632 - 70150 + | GrpE protein TERM 71 70709 - 70723 + G 74 -8.6 -4.01419 | opp_overlap 70709 GGAAGGATCAGAGAA GAACGA AGA TCGTTC TTTGGTTACTTCGTC TERM 72 70989 - 70979 - g 75 -3.2 -5.1287 | CCTAGATTCAAAAAA TCCG GTT CAGA TCTCGTGTACGATAT TERM 73 71234 - 71222 - g 83 -6.3 -4.98061 | AGAGAGGAAAGAAAA GTTCT CGA AGAAC TGGCGAAAAAACGCG TRQ2_0078 70157 - 71266 + | chaperone protein DnaJ TRQ2_0079 72354 - 71263 - | GTP-binding protein HSR1-related TERM 74 71648 - 71674 + g 87 -10.2 -4.11216 | overlap 71647 TTGAAGGTTTTCCTG GAGAGTTCTTCT CTT GGCAGAACTCTC TTTTGACACTCAGGA TRQ2_0080 73271 - 72366 - | GTP-binding protein Era TRQ2_0081 73656 - 73258 - | cytidine deaminase TRQ2_0082 74962 - 73595 - | hypothetical protein TRQ2_0083 75434 - 74979 - | hypothetical protein TRQ2_0084 76345 - 75431 - | glutamate formiminotransferase TRQ2_0085 77103 - 76342 - | response regulator receiver protein TERM 75 76980 - 77002 + g 72 -2.6 -5.0133 | overlap 76977 76981 TCTTTTCGCGGCGAA GGAGCGTGAA CGC TTCCTGCTCG TTTTTTGCCCAAATC TRQ2_0086 78512 - 77142 - | PEGA domain-containing protein TERM 76 77890 - 77907 + g 73 -7.7 -4.13995 | GTTCCTTCGTCCACT GATACCG TGAC CGGTGTC TTTCCTTTGTAAGAA TERM 77 78208 - 78222 + g 84 -5 -5.43487 | CTGAGAGAGTAGGTG GATTTC GAA GGAATC TTTTTTATCTCATTT TRQ2_0087 79182 - 78529 - | hypothetical protein TERM 78 78627 - 78613 - G 74 -5.6 -4.56775 | ATCTTCTTGTAAAAA CACCGC AAA GCCGTG TGAAGAATCTACCTG TERM 79 78927 - 78937 + g 74 -6.8 -4.27443 | opp_overlap 78909, overlap 78927 TCTCCCCCGCAGCCG CGAC GAA GTCG TTGTTTTGCTCATAG TRQ2_0088 80241 - 79231 - | cell cycle protein TRQ2_0089 81513 - 80308 - | hypothetical protein TERM 80 81408 - 81433 + g 91 -6.9 -5.59879 | opp_overlap 81413, overlap 81410 81413 AATTCACGACAAGAA TAAAATTCGCC CTGC GGCGAATTCTG TTTTTTCTGTTTCTG TERM 81 81410 - 81431 + g 77 -7.3 -4.40478 | opp_overlap 81413, overlap 81408 81413 TTCACGACAAGAATA AAATTCGCC CTGC GGCGAATTC TGTTTTTTCTGTTTC TERM 82 81428 - 81413 - G 100 -9 -4.9645 | opp_overlap 81413 81410 81408 ACGACAAGAATAAAA TTCGCC CTGC GGCGAA TTCTGTTTTTTCTGT TERM 83 81413 - 81428 + g 83 -9 -4.24741 | opp_overlap 81413, overlap 81410 81408 ACGACAAGAATAAAA TTCGCC CTGC GGCGAA TTCTGTTTTTTCTGT TRQ2_0090 83210 - 81510 - | type II secretion system protein E TERM 84 81591 - 81602 + g 70 -2.2 -5.00616 | GGCATCCTGGAACAT GGTG CGCA TACC TTTTTTCACAGCAAG TERM 85 82004 - 82018 + g 71 -7.1 -4.19483 | TGAGGGAGGCTTCCA CCGCA AGCTG TGCGG TTTCTCTGTCTCTGA TRQ2_0091 84265 - 83210 - | cell division protein FtsZ TRQ2_0092 85532 - 84282 - | cell division protein FtsA TRQ2_0093 86088 - 85534 - | hypothetical protein TRQ2_0094 88001 - 86091 - | DNA gyrase, B subunit TERM 86 86900 - 86914 + g 82 -2.8 -5.46629 | overlap 86902 TTTTCACGAGCTCGG GATTCG CGT CGAATA TTTTTTTCAGCTCTT TRQ2_0095 88287 - 87982 - | hypothetical protein TRQ2_0096 89105 - 88284 - | aminotransferase class IV TRQ2_0097 90369 - 89065 - | MiaB-like tRNA modifying enzyme TERM 87 90265 - 90288 + gr 100 -9.6 -4.91459 | opp_overlap 90260 GTAAGAAGCATCCCC GCCGGGTA AAACCACG TACCCGGC TTTTTCTAACTGTTC TRQ2_0098 90818 - 90366 - | CBS domain-containing protein TRQ2_0099 91778 - 90819 - | ribokinase-like domain-containing protein TERM 88 91478 - 91494 + g 72 -6.6 -4.26681 | TTGTTTTATTCTTTT CATCGA TTATT TCGATG TTTTCCCTCGTTTCT TRQ2_0100 92512 - 91808 - | ABC-type cobalamin/Fe3+-siderophores transport systems ATPase components-like protein TERM 89 92329 - 92345 + g 71 -9.5 -3.28001 | opp_overlap 92327 CACTTCTGGAAATCT CGTTGAA TAT TTCAACG TTCAATTTGACGATA TRQ2_0101 92779 - 93750 + | radical SAM domain-containing protein TRQ2_0102 93832 - 95280 + | radical SAM domain-containing protein TERM 90 95338 - 95321 - g 80 -7 -4.63179 | AAACAAGAAGGAAAA TCCTCG AAGCGG CGAGGA AGGCATTCTCAAAAT TRQ2_0103 95296 - 95868 + | TetR family transcriptional regulator TERM 91 95879 - 95852 - T 100 -14.2 -4.19238 | opp_overlap 95854, overlap 95854 TGCTCAAGGTGAAAA CAGAAGAGGGGC GTTA GCCCCTCTTCTT TTAATTTCAAAATCT TERM 92 95854 - 95877 + T 100 -16.8 -4.55128 | opp_overlap 95852 95854 CTCAAGGTGAAAACA GAAGAGGGGC GTTA GCCCCTCTTC TTTTAATTTCAAAAT TERM 93 95877 - 95854 - T 100 -16.8 -3.69618 | opp_overlap 95854, overlap 95852 CTCAAGGTGAAAACA GAAGAGGGGC GTTA GCCCCTCTTC TTTTAATTTCAAAAT TRQ2_0104 98252 - 95886 - | phenylalanyl-tRNA synthetase, beta subunit TRQ2_0105 99245 - 98268 - | phenylalanyl-tRNA synthetase, alpha subunit TERM 94 99027 - 99041 + g 81 -5 -5.12474 | TTGGATTTGCTGTCT CTTTTC TTC GAAGAG TTTTTCTATCTTCTC TERM 95 99322 - 99309 - R 75 -9.5 -3.42354 | opp_overlap 99288 GACTCGAACCCACAA GGGCC TCAC GGCCC ACCGGTTTTCGAGAC TRQ2_0106 100581 - 99394 - | iron-containing alcohol dehydrogenase TRQ2_0107 101819 - 100620 - | uracil-xanthine permease TERM 96 101839 - 101880 + r 81 -6.1 -4.93595 | gap 1, opp_overlap 101845 101849, overlap 101844 101849 ACACCTCCTGACATT TA-AAAATAAAGGCTCTTTG AAT CAAAGAGCCTTCAGTTTCTG TTTTTCAATTTTTCT TERM 97 101844 - 101874 + r 89 -9.8 -4.56791 | opp_overlap 101845 101849, overlap 101839 101849 TCCTGACATTTAAAA ATAAAGGCTCTTTG AAT CAAAGAGCCTTCAG TTTCTGTTTTTCAAT TERM 98 101873 - 101845 - R 100 -15.5 -4.70659 | opp_overlap 101844 101839 101849, overlap 101849 CCTGACATTTAAAAA TAAAGGCTCTTTG AAT CAAAGAGCCTTCA GTTTCTGTTTTTCAA TERM 99 101869 - 101849 - R 100 -14.1 -4.89966 | opp_overlap 101844 101839 101849, overlap 101845 ACATTTAAAAATAAA GGCTCTTTG AAT CAAAGAGCC TTCAGTTTCTGTTTT TERM 100 101849 - 101869 + r 100 -14.1 -3.40392 | opp_overlap 101849 101845, overlap 101844 101839 ACATTTAAAAATAAA GGCTCTTTG AAT CAAAGAGCC TTCAGTTTCTGTTTT TRQ2_0108 102602 - 101871 - | WecB/TagA/CpsF family glycosyl transferase TERM 101 102166 - 102182 + g 70 -5.1 -4.40561 | CTTCTGTTTACGTCT TCAACGA TTT TCGGTGA TTCTTTTTCGGAGAA TERM 102 102642 - 102624 - R 100 -11.7 -5.75342 | opp_overlap 102624 TTCCTCCAAAAAAAA GCGGAGG GAAGA CCTCCGC TTTCTGCTGGTGCCG TERM 103 102624 - 102642 + r 93 -11.7 -3.99324 | opp_overlap 102624 TTCCTCCAAAAAAAA GCGGAGG GAAGA CCTCCGC TTTCTGCTGGTGCCG TRQ2_0109 104804 - 102780 - | hypothetical protein TERM 104 103356 - 103386 + g 73 -7.6 -4.12532 | overlap 103357 103361 103364 ATGCTCGTATCCTTC CGGAGTGAGGTTGA CGA TCAACCTTATCCTG TTTCTGTCTCCAACG TERM 105 103357 - 103384 + g 72 -8.6 -3.65996 | gap 1, overlap 103356 103361 103364 TGCTCGTATCCTTCC GGAGTGAGGTTGA CGA TCAACCTTA-TCC TGTTTCTGTCTCCAA TERM 106 103536 - 103554 + g 83 -4.6 -5.40072 | opp_overlap 103527 103549, overlap 103533 CAAAATTTTGGAATC TGTTCC AACGAAC GGAACA TTTTTTTCCAGCACC TRQ2_0110 105234 - 104806 - | MarR family transcriptional regulator TERM 107 104925 - 104909 - G 75 -9.5 -3.64984 | opp_overlap 104907, overlap 104907 ACACTTTTCAAAAGA CTTTCGA AGT TCGAAAG AATCTCTCCGAAGAT TERM 108 105465 - 105477 + G 89 -9.1 -4.59853 | GATGCTCTTTGGAAT GGCAG ACA CTGCC TTTTTGGGACATTAC TERM 109 106448 - 106461 + G 72 -5.3 -4.72986 | opp_overlap 106448 TCCCCGTCAAGATAA TTGGA CTCT TCCAA TTTTTCCTCGCAATA TRQ2_0111 105343 - 106737 + | MATE efflux family protein TRQ2_0112 107837 - 106743 - | N-acetylglucosamine-6-phosphate deacetylase TRQ2_0113 108840 - 107848 - | glutamine--fructose-6-phosphate transaminase (isomerizing) TERM 110 108559 - 108579 + g 75 -9.8 -3.63627 | opp_overlap 108559 CCCGGTCCGCGAGAA GAGAAAGG CCAGT CCTTTCTC TTTGAGATCTGGAAC TERM 111 108579 - 108559 - G 71 -9.8 -3.28712 | opp_overlap 108559 CCCGGTCCGCGAGAA GAGAAAGG CCAGT CCTTTCTC TTTGAGATCTGGAAC TRQ2_0114 109669 - 108854 - | binding-protein-dependent transport systems inner membrane component TRQ2_0115 110564 - 109662 - | binding-protein-dependent transport systems inner membrane component TERM 112 110580 - 110609 + r 100 -9.2 -5.67283 | opp_overlap 110584, overlap 110583 110584 TCTCTCTCTCCTTTC GAAAGGGAGGGG GACACA CCCCTCCCCATC TTTTTTATTTCGATT TERM 113 110583 - 110606 + r 72 -9.5 -3.25791 | opp_overlap 110584, overlap 110580 110584 CTCTCTCCTTTCGAA AGGGAGGGG GACACA CCCCTCCCC ATCTTTTTTATTTCG TERM 114 110584 - 110605 + r 84 -13 -2.53848 | opp_overlap 110584, overlap 110583 110580 TCTCTCCTTTCGAAA GGGAGGGG GACACA CCCCTCCC CATCTTTTTTATTTC TERM 115 110605 - 110584 - R 100 -13 -3.53012 | opp_overlap 110584 110583 110580 TCTCTCCTTTCGAAA GGGAGGGG GACACA CCCCTCCC CATCTTTTTTATTTC TRQ2_0116 111876 - 110614 - | extracellular solute-binding protein TERM 116 111244 - 111255 + g 76 -4.4 -4.94147 | GTATTCCGGTCTGTC GAAG AGCA CTTC TTTTATTCTGTTGTT TRQ2_0117 113270 - 111873 - | glycoside hydrolase family 3 protein TERM 117 112032 - 112044 + g 79 -7.7 -4.44548 | overlap 112023 CGGAAGGCTCAGATG GGCTT TCA AAGCC TTTTCGTTCGGTATG TRQ2_0118 114336 - 113284 - | ROK family protein TERM 118 114468 - 114501 + r 78 -6.2 -4.60053 | gap 2, opp_overlap 114473 114475, overlap 114470 114471 114473 TAGGGAGGGAAAAAC GAAA--AGGTGGCTCC AGAA GGAGCCATCTGCTTTC TTGTTTTTACTTTCT TERM 119 114470 - 114497 + r 80 -6.2 -4.78157 | opp_overlap 114473 114475, overlap 114468 114471 114473 GGGAGGGAAAAACGA AAAGGTGGCTCC AGAA GGAGCCATCTGC TTTCTTGTTTTTACT TERM 120 114471 - 114496 + r 75 -9.7 -3.44454 | opp_overlap 114473 114475, overlap 114470 114468 114473 GGAGGGAAAAACGAA AAGGTGGCTCC AGAA GGAGCCATCTG CTTTCTTGTTTTTAC TERM 121 114494 - 114473 - R 91 -10.1 -4.78661 | opp_overlap 114471 114470 114468 114473, overlap 114475 AGGGAAAAACGAAAA GGTGGCTCC AGAA GGAGCCATC TGCTTTCTTGTTTTT TERM 122 114473 - 114494 + r 86 -12.3 -3.26101 | opp_overlap 114473 114475, overlap 114471 114470 114468 AGGGAAAAACGAAAA GGTGGCTCC AGAA GGAGCCATC TGCTTTCTTGTTTTT TERM 123 114492 - 114475 - R 77 -11.3 -2.66257 | opp_overlap 114473 114471 114470 114468, overlap 114473 GGAAAAACGAAAAGG TGGCTCC AGAA GGAGCCA TCTGCTTTCTTGTTT TRQ2_0119 115165 - 114518 - | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen TERM 124 115053 - 115038 - G 76 -9 -3.66378 | CACACCGGAGTGAAA TCAGCC GGAT GGCTGA AGAGAACGAACCACT TERM 125 115322 - 115304 - R 100 -14.6 -5.8901 | opp_overlap 115304 ACAGAAAACAAAAAA CGGGGAGA ATC TCTCCCCG TCTCTACAAGCTTTC TERM 126 115304 - 115322 + r 89 -14.6 -2.89055 | opp_overlap 115304 ACAGAAAACAAAAAA CGGGGAGA ATC TCTCCCCG TCTCTACAAGCTTTC TERM 127 115349 - 115364 + r 70 -6.2 -4.23045 | TTTCTTCTATCGTTT TCAGAA ATTC TTCTGA TTTCTTCAATCGTTC TRQ2_0120 118523 - 115326 - | O-antigen polymerase TERM 128 117099 - 117086 - G 70 -5.3 -4.44046 | opp_overlap 117086 CCCATTTGAAATAAA CTTCA GAAA TGAAG TAGTTCCATTTCAAG TERM 129 117323 - 117310 - G 74 -8.1 -4.01158 | AACGTGATGAAAGAA CTGGC AAGT GCCAG AAAGAGCAAGAGATC TRQ2_0121 119463 - 118540 - | glycosyl transferase family protein TRQ2_0122 120169 - 119468 - | HisJ family histidinol phosphate phosphatase TRQ2_0123 121740 - 120166 - | CTP synthase TERM 130 120225 - 120207 - G 73 -2.2 -5.14985 | opp_overlap 120208 120211, overlap 120208 120209 TCAAATAGACAAAAA TCGGGTGC GGT GCTCCCAC TTTGCTCTTGTACTC TERM 131 120796 - 120811 + g 80 -6.8 -4.7219 | TTCGAGCATCTGACT GTCCAC CACG GTGGGC TTTTCTATTCCTGTC TERM 132 121549 - 121566 + g 73 -9.9 -3.3854 | overlap 121538 ATCCGCTTCGTAACC GTCTTCG GTGA CGAAGAC TTCTCCGTGCTGGTT TERM 133 121835 - 121809 - H 70 -9.4 -2.9155 | opp_overlap 121808 121807 121801, overlap 121812 TTCCTTAACATGAGA GCACATCGGGAT TGT AACCCGATGTGA GATTATGGTATAATC TRQ2_0124 121882 - 123120 + | 3-oxoacyl-(acyl-carrier-protein) synthase 2 TRQ2_0125 123117 - 123530 + | beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ TRQ2_0126 123527 - 124471 + | enoyl-(acyl-carrier-protein) reductase II TRQ2_0127 124468 - 124977 + | BioY protein TRQ2_0128 124974 - 125855 + | malonyl CoA-acyl carrier protein transacylase TRQ2_0129 126516 - 125833 - | 2-phosphosulfolactate phosphatase TRQ2_0130 127526 - 126510 - | hypothetical protein TERM 134 127683 - 127693 + r 72 -8.2 -3.95475 | overlap 127680 ATCCGGCCTCAACGT GGCC TAT GGCC TGTTTCTTTTGGGTC TERM 135 128306 - 128282 - R 91 -7.1 -5.26119 | opp_overlap 128285 128294 CGGTCAAAAAGAAAA TGTGACCCCCT TTG AGAGGATCTCA TTCCTCGAGCCGCTC TRQ2_0132 129770 - 128304 - | hypothetical protein TERM 136 129306 - 129290 - G 88 -7.9 -4.93296 | overlap 129300 129302 CGAGGAGCAGAAAAA CGGTGTG AAA CACTCCG GTGACGAAGGGCATC TRQ2_0133 129825 - 131054 + | transposase TERM 137 131040 - 131088 + T 74 -11 -2.64472 | gap 1, opp_overlap 131065, overlap 131036 131084 131087 GTCAGCCGGCCTAAT GCT-CCCTCCTCGTGAGGTAGAG CAAG CCCTCCTTCAGGGGGAGGGCAGC TGACTTTCACAGCTC TERM 138 131085 - 131065 - T 74 -9.7 -3.2794 | opp_overlap 131040 131036 131084 CGTGAGGTAGAGCAA GCCCTCC TTCAGGG GGAGGGC AGCTGACTTTCACAG TRQ2_0134 131847 - 131095 - | ABC transporter related TRQ2_0135 132491 - 131853 - | hypothetical protein TERM 139 132006 - 131975 - G 76 -8.8 -3.66286 | gap 1, overlap 131978 AGATCATCTGAACAA GCACGTTCCCTGGAA TCG TTCCAGCGAACGC-C ACGGTGATGAAGGTG TERM 140 132004 - 131978 - G 85 -13.8 -2.94045 | overlap 131975 TCATCTGAACAAGCA CGTTCCCTGGAA TCG TTCCAGCGAACG CCACGGTGATGAAGG TRQ2_0136 132888 - 132475 - | 7-cyano-7-deazaguanine reductase TRQ2_0137 134089 - 132893 - | phosphomethylpyrimidine kinase type-1 TRQ2_0138 134835 - 134089 - | xylose isomerase domain-containing protein TERM 141 134560 - 134589 + g 89 -6.4 -5.4505 | overlap 134586 134588 AATTATCATGTATTC TGCGCCGATCTT CCTGGC AAGCTCAGCGCA TTTTTTGTTCACAGA TERM 142 134739 - 134713 - G 100 -12.3 -5.00616 | opp_overlap 134721 TTTGTCGTGAAAAAA GCGGAGGACCT TCTCG AGGTCTTCCGC CTTGAAAAAACCCAG TRQ2_0139 136106 - 134832 - | thiamine biosynthesis protein ThiC TERM 143 134952 - 134976 + g 71 -7.1 -4.15044 | opp_overlap 134957, overlap 134955 TCCCAGCGAAAGGCT GAACATCGTCT CCC AGTCGAAGTTC TTTCTTGCGAGGGCC TRQ2_0140 136857 - 136111 - | thiazole biosynthesis enzyme TERM 144 136908 - 136880 - H 100 -14.7 -4.72272 | opp_overlap 136886, overlap 136886 CCTCCTTAGTAAAAA TAAAAACCTCCGC CGA GCGGAGGTTTTTT ATTTCCTCCTTCCCC TERM 145 136902 - 136886 - H 100 -13.7 -5.65496 | opp_overlap 136886, overlap 136880 TAGTAAAAATAAAAA CCTCCGC CGA GCGGAGG TTTTTTATTTCCTCC TERM 146 136886 - 136902 + H 100 -13.7 -5.68438 | opp_overlap 136886 136880 TAGTAAAAATAAAAA CCTCCGC CGA GCGGAGG TTTTTTATTTCCTCC TRQ2_0141 137121 - 137465 + | hypothetical protein TRQ2_0142 137480 - 138277 + | Linocin_M18 bacteriocin protein TERM 147 138281 - 138302 + T 100 -13.7 -3.64703 | CTAAAGTTCTGATCT GGTCCGCTC CTCG GGGCGGACC TTTCGATCAAAGAAC TRQ2_0143 138824 - 138309 - | hypothetical protein TERM 148 138850 - 138873 + r 93 -15.2 -2.67244 | opp_overlap 138850, overlap 138847 138846 CCCTATAAAACAAAA GGGGCCGACC ATCC GGCCGGCCCC TCGATTTCAGTCTCA TERM 149 138873 - 138850 - R 100 -17.4 -5.18371 | opp_overlap 138850 138847 138846 CCCTATAAAACAAAA GGGGCCGACC ATCC GGCCGGCCCC TCGATTTCAGTCTCA TERM 150 138906 - 138927 + r 70 -5.7 -4.32034 | opp_overlap 138906, overlap 138907 GCTCACACGAAAACT CCCGGTCCT TCGA GGGGCCGGC TTTTGATCGTAGTGC TERM 151 138907 - 138926 + r 70 -9.2 -3.18738 | opp_overlap 138906, overlap 138906 CTCACACGAAAACTC CCGGTCCT TCGA GGGGCCGG CTTTTGATCGTAGTG TRQ2_0144 140041 - 139037 - | glycosidase PH1107-related TERM 152 139747 - 139759 + g 93 -6.3 -5.68023 | GCCAGAATACAACTT CCATT TCC AATGG TTTTTTTACTTCTCC TERM 153 140086 - 140063 - R 100 -16.8 -3.53012 | TTTCCCCCCTTGAAA CCTGAAGGGG AGGT CCCCTTCAGG CCAGCTGGTCCATCA TRQ2_0145 140297 - 140082 - | hypothetical protein TRQ2_0146 140813 - 140340 - | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen TRQ2_0147 140877 - 141620 + | hypothetical protein TERM 154 142159 - 142204 + G 79 -10.6 -3.56569 | gap 2, opp_overlap 142169 142173, overlap 142161 142166 142170 GAGTGACAGAACCCC AACCAC-GCAAGCC-ATCCCCC TTCA GGGGGATAGGTTTGTTGTGGTG TTAATTATCTTATGA TERM 155 142161 - 142202 + G 86 -13.2 -3.34812 | gap 2, opp_overlap 142169 142173, overlap 142159 142166 142170 GTGACAGAACCCCAA CCAC-GCAAGCC-ATCCCCC TTCA GGGGGATAGGTTTGTTGTGG TGTTAATTATCTTAT TERM 156 142166 - 142196 + G 88 -12.7 -3.54602 | gap 1, opp_overlap 142169 142173, overlap 142161 142159 142170 AGAACCCCAACCACG CAAGCC-ATCCCCC TTCA GGGGGATAGGTTTG TTGTGGTGTTAATTA TERM 157 142170 - 142192 + G 90 -9.9 -4.39277 | gap 1, opp_overlap 142169 142173, overlap 142166 142161 142159 CCCCAACCACGCAAG CC-ATCCCCC TTCA GGGGGATAGG TTTGTTGTGGTGTTA TERM 158 142188 - 142173 - g 70 -10.4 -2.5602 | opp_overlap 142170 142166 142161 142159, overlap 142169 CAACCACGCAAGCCA TCCCCC TTCA GGGGGA TAGGTTTGTTGTGGT TRQ2_0148 141626 - 142219 + | hypothetical protein TRQ2_0149 142243 - 142632 + | transposase IS200-family protein TERM 159 143354 - 143338 - g 80 -6.5 -4.88918 | overlap 143341 TTAGTGCAAAGAAAA GAGCCCT GAG ACGGCTC AGAAACCAGATCAAC TRQ2_0150 142617 - 143825 + | IS605 family transposase OrfB TERM 160 143864 - 143838 - T 74 -7.3 -4.29738 | gap 1, overlap 143839 TGAGAGCCACCAAAA GTCCCA-TCCCC TTCA GGGGATTGGGAG GAGGTCAAAACGTGA TERM 161 143863 - 143839 - T 78 -10.8 -3.17361 | gap 1, overlap 143838 GAGAGCCACCAAAAG TCCCA-TCCCC TTCA GGGGATTGGGA GGAGGTCAAAACGTG TERM 162 143900 - 143921 + T 85 -10.1 -4.24745 | opp_overlap 143901, overlap 143901 GAAACGATTGAATAA AGAAGGGGC TTTC GCCCCTTCA TTTCTGTTCCTGATC TERM 163 143901 - 143920 + T 93 -13.6 -3.14124 | opp_overlap 143901, overlap 143900 AAACGATTGAATAAA GAAGGGGC TTTC GCCCCTTC ATTTCTGTTCCTGAT TERM 164 143920 - 143901 - T 100 -13.6 -4.23647 | opp_overlap 143900 143901 AAACGATTGAATAAA GAAGGGGC TTTC GCCCCTTC ATTTCTGTTCCTGAT TRQ2_0151 145991 - 143919 - | translation initiation factor IF-2 TERM 165 144412 - 144391 - G 75 -10.1 -3.57263 | ACCTTCACCCTGAAA CCGAGGATG ACCC CATCCACGG CAGCGGCGAGCATCA TRQ2_0152 146325 - 146011 - | ribosomal protein L7Ae/L30e/S12e/Gadd45 TRQ2_0153 146551 - 146330 - | hypothetical protein TERM 166 146425 - 146413 - G 81 -3.4 -5.41359 | overlap 146405 146406 AAGGAAAGTAAAAAA CGAA GTTTT TTCG CCTTATCACTATATC TRQ2_0154 147369 - 146554 - | PSP1 domain-containing protein TRQ2_0155 148298 - 147360 - | DNA polymerase III gamma/tau subunits-like protein TERM 167 147668 - 147683 + g 72 -5.4 -4.4448 | overlap 147676 CGAGATAACCCTCGA GTCCTT CTGA AAGGGC TTTCTTTAAGAGTTT TERM 168 148180 - 148197 + g 73 -9.9 -3.31869 | opp_overlap 148194, overlap 148178 148191 AGTTCAAGGGATACT TCTCTCG GATA CGAGAGA TCTTCTCCGTTTATG TERM 169 148947 - 148921 - g 75 -6.7 -4.48483 | gap 1 GAGAAGAAAGAGAAA CGATC-TGGAAA GAAC TCTCCAAGATCG AAGGGGTTTACGTTC TERM 170 149016 - 148991 - g 89 -6.3 -5.42514 | gap 1, opp_overlap 148996, overlap 148996 GCAGAAAGGAAAAAA GATAGTTCCAGT TTC ACCGGAA-TATC CTCAGACCATAAAAA TRQ2_0156 148359 - 150158 + | radical SAM domain-containing protein TERM 171 151176 - 151149 - g 87 -10.6 -4.15044 | gap 1 TCGGTTTCGAAGAAA GCTGTGGGTACCT TGC AGGAACCCAC-GC GAGGGACAAAGACGG TRQ2_0157 150155 - 151570 + | phosphoglucomutase/phosphomannomutase alpha/beta/subunit TERM 172 151644 - 151668 + G 95 -14.9 -3.55444 | opp_overlap 151637 TGTGAACACGGTGGT GGAGGTCCGCG ACG CGCGGGCCCCC TTTGCCACATCGGCG TERM 173 151810 - 151796 - g 78 -6.4 -4.7329 | AAAAGCAGGGAAAAA GAGTGA TCA CCACTC ACAAAGATGAACCAA TERM 174 151958 - 151934 - g 74 -3.4 -4.99134 | overlap 151935 AGCTGAAAGGAAAAA GGGCGAGCTC TGTTG GAGCACAGCC TGGCGTTACAAAGGG TERM 175 152232 - 152204 - g 100 -12.5 -4.83169 | overlap 152221 ACTTTGCGAGAAAAA GAGGACTCCTC AAAAAAG GAGGAGTCCCC GATATAGAAAGAGCT TERM 176 152232 - 152221 - g 74 -3.6 -5.02074 | overlap 152204 GGACTCCTCAAAAAA GGAG GAGT CCCC GATATAGAAAGAGCT TRQ2_0158 151567 - 152355 + | GTP-binding protein HSR1-related TRQ2_0159 154231 - 152318 - | hypothetical protein TRQ2_0160 154354 - 154719 + | GntR family transcriptional regulator TERM 177 154928 - 154883 - g 72 -2.8 -4.93365 | gap 3, opp_overlap 154899 154900, overlap 154876 154899 TTTGAGAAGGAAAAA CTCCGGAGAGATCGAACTGAACG GCA CGTTCACTT--ATCTA-CCGGAG GAGAAGAAGCTCTAT TERM 178 154976 - 154962 - g 72 -8.6 -3.71378 | opp_overlap 154964, overlap 154969 TATCTCAGAGTGAAA GAGATC ATC GATCTC TTCGAGAAGATAGGG TRQ2_0161 154719 - 155513 + | ABC transporter related TRQ2_0162 155503 - 156249 + | hypothetical protein TRQ2_0163 156264 - 156584 + | hypothetical protein TERM 179 156601 - 156586 - T 93 -11.8 -3.96705 | opp_overlap 156586, overlap 156580 TGGAGAAAATTTAAA GGGGCG GGAA CGCCCC TTGATTACACTTCTT TERM 180 156586 - 156601 + T 85 -11.8 -3.38727 | opp_overlap 156586 156580 TGGAGAAAATTTAAA GGGGCG GGAA CGCCCC TTGATTACACTTCTT TRQ2_0164 157394 - 156606 - | ribosomal protein S2 TRQ2_0165 158781 - 157534 - | major facilitator transporter TRQ2_0166 160037 - 158841 - | glycosyl transferase group 1 TRQ2_0167 160798 - 160034 - | hexapaptide repeat-containing transferase TRQ2_0168 160959 - 162500 + | flagellin domain-containing protein TERM 181 162520 - 162535 + F 100 -11.8 -4.96501 | AAACACCGTCAATTC GGGGGC GCAA GCCCCC TTTGTTTTTGTGCAA TERM 182 163001 - 162982 - g 84 -5 -5.44119 | gap 1, opp_overlap 162993, overlap 162984 GGGATTTCAAAAAAA CAGAAGTGG CCT CCACT-CCG AGGATATTCAGAAAC TERM 183 163000 - 162984 - g 79 -8.7 -4.36089 | opp_overlap 162993, overlap 162982 GATTTCAAAAAAACA GAAGTGG CCT CCACTCC GAGGATATTCAGAAA TERM 184 163315 - 163331 + G 88 -3.7 -5.80248 | opp_overlap 163315 AGGTTGGAAAAATAC CTCCA ATAGGTC TGGAG TTTTTTTATATATTC TERM 185 163876 - 163860 - g 76 -8.7 -4.15788 | AAGCTTTTGAACAAA CTCCCTG TTT CAAGGAG AATCTCCAAATTCAT TERM 186 164422 - 164406 - g 81 -3.7 -5.43974 | overlap 164407 AAAAGCAAAGAAAAA GCAAGAA CGC TTCTTGA AAGAATAAAAGACAT TERM 187 164633 - 164619 - g 75 -2.8 -5.14563 | overlap 164622 CCGTTCATGAAAAAA GAGGAT GAA ATCATC TGGGTGGGAAACATA TERM 188 164664 - 164650 - g 72 -8.6 -3.81488 | opp_overlap 164649 164650 GGGTGGGAAACATAA CAGAGA GAT TCTCTG GTTTTGGTGCGATTC TRQ2_0169 162606 - 165188 + | glycosyl transferase family protein TRQ2_0170 165191 - 166555 + | glycosyl transferase group 1 TRQ2_0171 166559 - 167266 + | hypothetical protein TERM 189 167638 - 167622 - g 72 -5.1 -4.59853 | opp_overlap 167625, overlap 167625 CGAATTTTGGAAAAA GACTCCT TGA AGGATTC TACGGTATAAAAGAC TRQ2_0172 167279 - 168475 + | flavodoxin/nitric oxide synthase TRQ2_0173 168482 - 169558 + | FAD-dependent pyridine nucleotide-disulphide oxidoreductase TRQ2_0174 169555 - 170217 + | ubiquinone/menaquinone biosynthesis methyltransferase TERM 190 170520 - 170506 - g 84 -8.6 -4.66953 | TGAAGATCGTAAAAA CATCCA GTC TGGATG AAGCCATAGATGGAG TERM 191 170988 - 170967 - g 70 -9.5 -3.052 | opp_overlap 170965 170967, overlap 170975 AGGTTCAGATACAGA GGAGAAGAT GCCT ATCCTCTCC TTGATGAGTGGATAG TRQ2_0175 170307 - 171716 + | glycoside hydrolase family protein TERM 192 171742 - 171726 - f 93 -10.8 -4.56978 | opp_overlap 171726 CTCTGAAAGAACAAA GCCCCC TGATC GGGGGC TTTTCTTCTGGCTGG TERM 193 171726 - 171742 + F 95 -10.8 -4.79352 | opp_overlap 171726 CTCTGAAAGAACAAA GCCCCC TGATC GGGGGC TTTTCTTCTGGCTGG TERM 194 172902 - 172891 - g 76 -2.2 -5.4251 | TGGACAGAGAAAAAA CACC GCGT GATG AAAACGGAAACTACG TERM 195 173331 - 173309 - g 84 -8.4 -4.67607 | opp_overlap 173329, overlap 173311 173328 173330 GGGTGAAGAAAGAAA CATCTTCCCG TTC CAGGAAGAGG CCGATGTGATGTTCA TERM 196 173329 - 173311 - g 80 -9.6 -3.94772 | overlap 173309 173328 GTGAAGAAAGAAACA TCTTCCCG TTC CAGGAAGA GGCCGATGTGATGTT TRQ2_0176 171885 - 173552 + | phosphoribulokinase/uridine kinase TRQ2_0177 173549 - 174427 + | hypothetical protein TERM 197 174805 - 174793 - g 79 -7.7 -4.48902 | overlap 174796 ATAGATGGAAAGAAA CGAGA TGT TCTCG CGAAGCACGTGGACA TRQ2_0178 174424 - 174870 + | hypothetical protein TRQ2_0179 174855 - 175643 + | tRNA methyltransferase complex GCD14 subunit TERM 198 176609 - 176598 - g 73 -4.4 -4.82901 | TTGTTGGGAGAAAAA CCTT CGGT AAGG GCTCAGTACAGACGG TRQ2_0180 175640 - 176848 + | carboxyl-terminal protease TERM 199 176869 - 176846 - g 82 -6.8 -4.73682 | opp_overlap 176846 176850 CTCGAGAAGATAAAA TGACGAGAAA CGGA TTTCTCTTCA TCCTGTTTGTGGTAA TRQ2_0181 176845 - 177231 + | hypothetical protein TERM 200 177361 - 177379 + G 73 -2.5 -5.21459 | gap 1, opp_overlap 177348, overlap 177351 177348 ACTCGCTCAGGATTC TCCT-GAA GATT TTCGAGGA TTTCTTTTTGTTTTT TRQ2_0182 177231 - 177656 + | hypothetical protein TERM 201 178646 - 178632 - g 72 -8.6 -3.7519 | GAAGAAAATGAAAGA CTCTTC GCC GAAGAG ATAAAACACATTCTG TRQ2_0183 177663 - 178883 + | glycosyl transferase group 1 TRQ2_0184 178889 - 179533 + | hypothetical protein TERM 202 179696 - 179710 + F 83 -4.2 -5.40072 | opp_overlap 179698, overlap 179698 TGATAGAGCTTTCGA AACACC ACA GGTGTG TTTTTTTGAGAGGAA TERM 203 179698 - 179708 + F 74 -6.8 -4.34482 | opp_overlap 179698, overlap 179696 ATAGAGCTTTCGAAA CACC ACA GGTG TGTTTTTTTGAGAGG TERM 204 179837 - 179849 + F 81 -3.4 -5.40072 | opp_overlap 179837, overlap 179827 GAGTCGAAGAGATCA GGAA ATTTC TTCC TTTTTTTCGAAAACA TERM 205 180426 - 180411 - g 70 -4.7 -4.43221 | AAACATGGTATAAAA GTCCT GGTGAG AGGAC TCAGGGCTGTGACCG TRQ2_0186 180165 - 180650 + | pantetheine-phosphate adenylyltransferase TRQ2_0187 180647 - 182569 + | threonyl-tRNA synthetase TERM 206 182633 - 182621 - g 70 -2 -5.01732 | AAGCTGTTGAAAAAA TAGA TCGAC TCTA CGAAAAGGTTGATTC TERM 207 182991 - 182974 - g 72 -6.3 -4.20368 | opp_overlap 182968, overlap 182975 TTATCGGAAGAGAAA CTCTCTC TGTT GAGAGAA TACGCCATGTTACAC TRQ2_0188 182572 - 183411 + | metal dependent phosphohydrolase TRQ2_0189 183876 - 183391 - | hypothetical protein TERM 208 183727 - 183741 + g 95 -11.4 -4.63089 | GTAGATGATCGTCCC GCCCTC TCT GAGGGC TTCTTTTTTGAAGTA TRQ2_0190 185060 - 183873 - | hypothetical protein TERM 209 183965 - 183996 + g 77 -9.4 -3.86015 | overlap 183957 183963 183968 183989 CCATTATGATCTTCG GAAGCTCTGCTTTC CTGT GGAAGCCGTGCTTC TTTCTGAGGCCGATC TRQ2_0191 185902 - 185066 - | mannose-6-phosphate isomerase type I TRQ2_0192 187266 - 185899 - | hypothetical protein TRQ2_0193 188589 - 187282 - | gid protein TRQ2_0194 189004 - 188594 - | putative anti-sigma regulatory factor, serine/threonine protein kinase TRQ2_0195 189774 - 189001 - | hypothetical protein TRQ2_0196 190309 - 189740 - | hypothetical protein TERM 210 190064 - 190044 - GR 78 -8.3 -4.07618 | opp_overlap 190044 190040, overlap 190040 CTTTCAAGAAGGAAA GCGATGCAA CTC TCACATCGC TTGCTGCCTTCACCG TRQ2_0197 190769 - 190320 - | D-tyrosyl-tRNA(Tyr) deacylase TRQ2_0198 192910 - 190766 - | (p)ppGpp synthetase I, SpoT/RelA TERM 211 191220 - 191240 + g 70 -2.5 -5.0133 | GTCTTCTTCTTCGTG GATCGCTTT TTC ACAACGATC TTTTTTCCCAGAATA TERM 212 191449 - 191463 + g 82 -7.2 -4.77036 | GCGCGAGTTTTTCCT TCAGAA ATC TTCTGA TTTTTGCTCGTGCGC TRQ2_0199 194125 - 193295 - | hypothetical protein TRQ2_0200 195416 - 194109 - | peptidase U62 modulator of DNA gyrase TERM 213 195200 - 195235 + g 73 -4.6 -4.77986 | opp_overlap 195196, overlap 195197 195202 CTTCGAAACACTTTT CTGGATCTTCCAGAAC CTGT GTTCTGAACGCTCCTG TTTTTCCATCTTTCA TRQ2_0201 196801 - 195413 - | peptidase U62 modulator of DNA gyrase TERM 214 196432 - 196446 + g 91 -8.6 -5.03314 | opp_overlap 196434 AGGCTTTTTTCATGA CAGACA CTT TGTCTG TTTTTTCCACCTGAG TRQ2_0202 196911 - 197768 + | hypothetical protein TRQ2_0203 198694 - 197765 - | CaCA family Na(+)/Ca(+) antiporter TRQ2_0204 199121 - 198702 - | hypothetical protein TRQ2_0205 201250 - 199118 - | ribonuclease R TERM 215 199708 - 199718 + g 71 -6.8 -4.10453 | opp_overlap 199707 TGCTTCTCAAAGGAT GGTC TTT GACC TTTTCCAGAAGTTTC TRQ2_0206 201894 - 201265 - | uracil phosphoribosyltransferase TERM 216 201327 - 201355 + g 73 -11 -2.75845 | overlap 201325 TGATGTAACCGTGAT CGTTGAGGCGCT CGTCC AGTGCCGCAACG TAGATTTTAACATCT TRQ2_0207 203174 - 201891 - | glycine hydroxymethyltransferase TRQ2_0208 204568 - 203186 - | cysteinyl-tRNA synthetase TRQ2_0209 205038 - 204586 - | CheW protein TRQ2_0210 205455 - 205051 - | biotin/lipoyl attachment domain-containing protein TRQ2_0211 205736 - 205428 - | hypothetical protein TRQ2_0212 207293 - 205746 - | carboxyl transferase TERM 217 206626 - 206613 - G 74 -8.1 -3.85698 | opp_overlap 206613 206616 GTTGTCTGCCAGAAA GTGGG CGTT CCCAC TCCTTTGATTGTGAA TRQ2_0213 209886 - 207295 - | CBS domain-containing protein TERM 218 207874 - 207895 + g 79 -4.4 -5.09762 | ATCGAACTGTGCCAT CCTTCTGA TCGACT TCAGGGGG TTTTTCTCTTCGAGT TRQ2_0214 210504 - 209887 - | OstA family protein TRQ2_0215 211196 - 210501 - | hypothetical protein TRQ2_0216 211999 - 211241 - | patatin TRQ2_0217 213216 - 212002 - | S-layer domain-containing protein TERM 219 212676 - 212692 + g 90 -7.3 -5.40072 | TCTGTTGTGAACTCT CTTCAAG CTT CTTGAGG TTTTTTTCCACAACG TERM 220 212955 - 212974 + g 70 -2.1 -4.97824 | gap 1, opp_overlap 212951 CTTTTACAATATCGA GCTCATCG AGCAG CGG-GAGC TTTTCTTTGAGTTTT TRQ2_0218 213708 - 213277 - | MarR family transcriptional regulator TRQ2_0219 214381 - 213713 - | uroporphyrin-III C/tetrapyrrole methyltransferase TERM 221 214155 - 214182 + g 74 -3.5 -4.98461 | gap 1 CTGACAATGGCTACT TTCTTCC-CTTC CTTGA GAAGCGGCAGAA TTTCTTTTATTCTTT TRQ2_0220 215093 - 214383 - | biotin/lipoate A/B protein ligase TRQ2_0221 215776 - 215090 - | methyltransferase GidB TERM 222 215594 - 215616 + g 71 -7.8 -3.88985 | GAGTGTCCCTTTCAG TTCTTCTTTC AAA GGAAGGAGAA TTTCTACAACATTTT TRQ2_0222 215824 - 218382 + | hypothetical protein TRQ2_0223 218388 - 219065 + | ABC transporter related TRQ2_0224 219982 - 219029 - | protein-L-isoaspartate(D-aspartate) O-methyltransferase TERM 223 219211 - 219179 - G 74 -8.5 -3.91897 | overlap 219180 CCTGTCATCGAGAAA CTCTACCACGCCG TTTGGCC CAGCGTAGTAGAA CGTTCCATCAATCTC TERM 224 219210 - 219180 - G 70 -9.8 -2.94924 | overlap 219179 CTGTCATCGAGAAAC TCTACCACGCCG TTTGGCC CAGCGTAGTAGA ACGTTCCATCAATCT TERM 225 219372 - 219382 + g 71 -6.8 -4.13654 | opp_overlap 219371 CCTGCCGTTATGAAC CTGG TTT CCAG TTTGTAGTTTCCCAC TERM 226 220543 - 220553 + G 74 -6.8 -4.20148 | overlap 220536 GAGAACTCCAGATGC CCTG TAT CAGG TTGTTTTGAAATACT TRQ2_0225 220025 - 221251 + | competence/damage-inducible protein CinA TERM 227 221944 - 221928 - g 72 -6.5 -4.26792 | opp_overlap 221928, overlap 221920 AGAGAAATTCGAAAA CGAAGTG GAA CTCTTCG TAATCTCCCCTGTGG TERM 228 222266 - 222241 - g 77 -7 -4.46621 | gap 1 TACAACATAAAAGAA CTG-GATGAGA GTTTG TCTCATCTCAG CAGGATCACCTTAGA TRQ2_0226 221248 - 223263 + | CheA signal transduction histidine kinase TRQ2_0227 223278 - 223724 + | CheW protein TRQ2_0228 223728 - 224090 + | response regulator receiver protein TRQ2_0229 224097 - 224390 + | hypothetical protein TRQ2_0230 224387 - 225136 + | flagellar biosynthetic protein FliP TRQ2_0231 225143 - 225409 + | flagellar biosynthetic protein FliQ TRQ2_0232 225422 - 226075 + | hypothetical protein TERM 229 226098 - 226070 - T 78 -10.4 -3.61591 | gap 1, opp_overlap 226068 226075, overlap 226073 226075 GAAAAATTGACAGAA GAATA-GGGCACC TTCC GGTGCCCTTACTC TCTTGTGCTGACGAC TERM 230 226094 - 226073 - T 82 -10.1 -3.91364 | opp_overlap 226068 226075, overlap 226070 226075 AAATTGACAGAAGAA TAGGGCACC TTCC GGTGCCCTT ACTCTCTTGTGCTGA TERM 231 226075 - 226092 + T 90 -12.7 -3.40593 | opp_overlap 226073 226070 226075, overlap 226068 ATTGACAGAAGAATA GGGCACC TTCC GGTGCCC TTACTCTCTTGTGCT TERM 232 226092 - 226075 - T 93 -12.7 -3.53276 | opp_overlap 226075 226068, overlap 226073 226070 ATTGACAGAAGAATA GGGCACC TTCC GGTGCCC TTACTCTCTTGTGCT TRQ2_0233 226704 - 226093 - | ATP-dependent Clp protease, proteolytic subunit ClpP TERM 233 226473 - 226483 + gT 71 -6.8 -4.04206 | opp_overlap 226472 226473 CCGCCGTCACAGAAC CTCC GGG GGAG TTTATGTAGAGGTAG TRQ2_0234 227953 - 226676 - | trigger factor domain-containing protein TERM 234 227417 - 227431 + gr 91 -2.1 -5.88471 | overlap 227418 TATCACGTATTCGTA TTCAC GAGAG GTGAG TTTTTTTTCCTCCTC TERM 235 227481 - 227494 + gr 71 -9.5 -3.03085 | overlap 227483 ACTCTCACGAGATCT CCCGC TTCA GCGGG TCCTTCTTTGGGCTC TRQ2_0235 228252 - 227980 - | hypothetical protein TERM 236 228091 - 228101 + g 76 -4 -5.07941 | CTTTCTCTTTTCGAT GATT TCC AATC TTTTTCTGTCCTTTT TRQ2_0236 228767 - 228258 - | holo-acyl-carrier-protein synthase TRQ2_0237 229414 - 228764 - | methyltransferase type 11 TERM 237 228992 - 228980 - G 70 -4.8 -4.42765 | overlap 228982 TTTCAAAAAACGAAA CGTC GCCTG GACG AATCCTTCTATGTCT TRQ2_0238 229860 - 229411 - | hypothetical protein TERM 238 229910 - 229884 - R 100 -12.2 -4.56775 | overlap 229885 229886 ACCTCCTCCCAAAAA TCGAGACCCCGC GGG GCGGGGCCTCAG GAAATCACACCTCTC TERM 239 229909 - 229885 - R 100 -15.7 -3.33744 | overlap 229884 229886 CCTCCTCCCAAAAAT CGAGACCCCGC GGG GCGGGGCCTCA GGAAATCACACCTCT TERM 240 229908 - 229886 - R 100 -17 -2.60032 | overlap 229885 229884 CTCCTCCCAAAAATC GAGACCCCGC GGG GCGGGGCCTC AGGAAATCACACCTC TRQ2_0239 230638 - 229907 - | Triose-phosphate isomerase TRQ2_0240 231870 - 230671 - | phosphoglycerate kinase TERM 241 230918 - 230933 + g 72 -4.7 -4.65895 | AAGACTCCCATAGGC CCGTT CCAGAC AACGG TTTTTGCATCGGAGA TERM 242 231898 - 231917 + r 83 -10.6 -3.68302 | opp_overlap 231899, overlap 231899 TTTTTGAGTCTGAGA AGGGCGGG AAAA CCCGCCCG TTCTTCACATCTTGA TERM 243 231916 - 231899 - R 100 -14.1 -3.31144 | opp_overlap 231898 231899 TTTTGAGTCTGAGAA GGGCGGG AAAA CCCGCCC GTTCTTCACATCTTG TERM 244 231899 - 231916 + r 87 -14.1 -2.80499 | opp_overlap 231899, overlap 231898 TTTTGAGTCTGAGAA GGGCGGG AAAA CCCGCCC GTTCTTCACATCTTG TRQ2_0241 232923 - 231922 - | glyceraldehyde-3-phosphate dehydrogenase, type I TRQ2_0243 234733 - 233297 - | DNA polymerase III, subunits gamma and tau TERM 245 233368 - 233386 + g 80 -6 -5.03747 | overlap 233371 CTTCTTTTCCCATCA GTCGAAGT TCA ACTTCTAC TTTTTTCCCGAGTTT TERM 246 234514 - 234536 + g 70 -4.8 -4.45168 | overlap 234515 CTCTGCAGGCTCTGC AGGAGTTGCA GGG TTCAACTCCC TTTCTGTTTTCACAG TRQ2_0244 234798 - 235391 + | lytic transglycosylase catalytic TRQ2_0245 235861 - 235388 - | tartrate dehydratase subunit beta TRQ2_0246 236475 - 235858 - | peptidase M50 TRQ2_0247 237419 - 236469 - | polysaccharide pyruvyl transferase TERM 247 236510 - 236520 + g 75 -3.2 -5.15526 | GCATCTCCTTCATCT CGAT AGC GTCG TTTTTCATTTTCTCT TERM 248 236588 - 236618 + g 78 -6.3 -4.69028 | gap 1, opp_overlap 236578, overlap 236578 TCAAAGAGATTTCCA GAGGATC-TCTCTT TGAA AAGAAATGATCCTC TTTTGTGTATCTTGT TRQ2_0248 237482 - 238222 + | beta-lactamase domain-containing protein TRQ2_0249 239252 - 238212 - | CheC, inhibitor of MCP methylation / FliN fusion protein TERM 249 238787 - 238769 - G 77 -11 -3.21063 | opp_overlap 238767 238765, overlap 238767 238762 CATCGAAATTCAATA TCTCCACC TTT GGCGGAGA GATATTGATGGTTAT TRQ2_0250 240235 - 239249 - | flagellar motor switch protein FliM TRQ2_0251 240754 - 240245 - | flagellar basal body-associated protein FliL TERM 250 240518 - 240540 + g 73 -10.6 -3.10091 | TATCACGACTACGTC CCTTCCTCCT TTG AGAAGGAAGG TCTGGTTTTCCCCCT TRQ2_0252 241630 - 240764 - | OmpA/MotB domain-containing protein TERM 251 240946 - 240956 + g 85 -5.4 -5.42975 | TGATCTGGTTTTCAA GATC CTG GATC TTTTTCTTTATCTCC TRQ2_0253 242418 - 241630 - | MotA/TolQ/ExbB proton channel TERM 252 241975 - 241954 - G 71 -10.1 -3.16267 | overlap 241949 TCCAATCATACCGAA CGCAGGAGC GTAC GCCCCTGCA GATTCCAAAACAGCC TRQ2_0254 242626 - 242423 - | flagellar FlbD family protein TRQ2_0255 244885 - 242633 - | hypothetical protein TERM 253 243533 - 243518 - G 72 -2.6 -4.93898 | gap 1, opp_overlap 243520, overlap 243520 AGATGATGATAAAAA CG-TTAC TGT GTAATCG TTCCCGGAAGTTATG TERM 254 244330 - 244368 + g 80 -6.1 -4.86731 | AAGAGCCAGGTCCCA CGTTGGAGTTGAGATTT CCTTC AAATCTCACGTTCGACG TTTTCTTTGCGGGCA TRQ2_0256 245559 - 244885 - | flagellar hook capping protein TRQ2_0257 247580 - 245556 - | flagellar hook-length control protein TERM 255 245605 - 245616 + g 70 -2.2 -5.08367 | AGACTGCCCGAAGTT TCAC GTTT GTGG TTTTTGCTTTCTCTT TERM 256 245673 - 245690 + g 78 -5.5 -4.87665 | opp_overlap 245675, overlap 245666 245663 CTGATTTTCCTGATA CAGGTAG TCTT CTTCCTG TTTTTCTACGTAGAC TERM 257 245927 - 245941 + g 79 -8.6 -4.27316 | CAAACCTTGGTAGAT GAACAG TCT CTGTTC TTTTCAGTTCGGGGA TERM 258 246899 - 246911 + g 76 -4.9 -4.90302 | CTGAATCTTTCACCA GAAAA CCG TTTTC TTTCTTTTCTTCATG TRQ2_0258 248491 - 247577 - | M-related protein TERM 259 248482 - 248461 - G 79 -2.3 -5.52986 | overlap 248447 248464 ACGTTATTAAAAAAA CAACGAAAA AACC TCTTCGTTT TCCAGGCAAGGTCCA TERM 260 248479 - 248464 - G 73 -4 -4.8487 | overlap 248447 248461 TTATTAAAAAAACAA CGAAAA AACC TCTTCG TTTTCCAGGCAAGGT TRQ2_0259 248560 - 249003 + | hypothetical protein TRQ2_0260 249000 - 249599 + | hypothetical protein TRQ2_0261 250729 - 249596 - | DegT/DnrJ/EryC1/StrS aminotransferase TRQ2_0262 251496 - 250726 - | TatD family hydrolase TERM 261 251051 - 251039 - G 80 -5.5 -5.07486 | TAGTTCGAAGAAAAA GCGTG AAT CACAC CTCGTTTCTCTGGAA TERM 262 251339 - 251364 + g 72 -6.3 -4.20749 | gap 1 GAACAGAAGATGCGA TCACTTG-TCTT TGA AAGATCGAGTGA TTTCTTCGAATCTTC TERM 263 251564 - 251551 - H 77 -5.3 -5.00616 | opp_overlap 251551 GCTTTTGTGAAAAAA GTGAA GAGG TTCAC CTTTTTGTGATGAAA TRQ2_0263 251669 - 252322 + | serine O-acetyltransferase TRQ2_0264 252240 - 253112 + | cysteine synthase A TERM 264 253222 - 253248 + GF 86 -9.4 -4.33182 | overlap 253219 253223 CGTAGGATCCGCGAT GGGGGGATTCTT CAA GAGGATCCCCCG TTATTTTCTCGGTCC TERM 265 253223 - 253247 + GF 91 -12.9 -3.19186 | overlap 253222 253219 GTAGGATCCGCGATG GGGGGATTCTT CAA GAGGATCCCCC GTTATTTTCTCGGTC TRQ2_0265 253109 - 253540 + | hypothetical protein TERM 266 254234 - 254249 + GF 73 -2.6 -5.04385 | gap 1 GAGACTCGCGCTTTC TCTC-AG GAC CTCGAGA TTTTTTGAGAATCTG TRQ2_0266 253479 - 255047 + | metallo-beta-lactamase superfamily hydrolase-like protein TRQ2_0267 255081 - 255326 + | acyl carrier protein TERM 267 255344 - 255314 - T 82 -9.1 -4.24204 | gap 1, opp_overlap 255320, overlap 255318 255319 255320 CAGCTACATTGAAAA GAAATTGGGGTGAG CTCG CTCACCCCT-TTTC TATCTCCTCCGGTGT TERM 268 255341 - 255318 - T 79 -6.6 -4.70515 | opp_overlap 255320, overlap 255314 255319 255320 TACATTGAAAAGAAA TTGGGGTGAG CTCG CTCACCCCTT TTCTATCTCCTCCGG TERM 269 255340 - 255319 - T 76 -10.1 -3.41224 | opp_overlap 255320, overlap 255318 255314 255320 ACATTGAAAAGAAAT TGGGGTGAG CTCG CTCACCCCT TTTCTATCTCCTCCG TERM 270 255339 - 255320 - T 86 -13.6 -2.6365 | opp_overlap 255320, overlap 255319 255318 255314 CATTGAAAAGAAATT GGGGTGAG CTCG CTCACCCC TTTTCTATCTCCTCC TERM 271 255320 - 255339 + T 100 -13.6 -4.62984 | opp_overlap 255320 255319 255318 255314 CATTGAAAAGAAATT GGGGTGAG CTCG CTCACCCC TTTTCTATCTCCTCC TRQ2_0268 256262 - 255333 - | hypothetical protein TRQ2_0269 257050 - 256259 - | hypothetical protein TERM 272 257190 - 257160 - R 100 -19.9 -3.53012 | opp_overlap 257166, overlap 257166 CGGGTCGTGGGGAAA GAGAAAGGGGAGG GCCAG CCTCCCCTTTCTC TGACGGTAAGACTTC TERM 273 257166 - 257184 + r 93 -11.7 -4.04206 | opp_overlap 257166 257160 GTGGGGAAAGAGAAA GGGGAGG GCCAG CCTCCCC TTTCTCTGACGGTAA TERM 274 257184 - 257166 - R 95 -11.7 -4.32857 | opp_overlap 257166, overlap 257160 GTGGGGAAAGAGAAA GGGGAGG GCCAG CCTCCCC TTTCTCTGACGGTAA TRQ2_0270 257371 - 257210 - | rubredoxin-type Fe(Cys)4 protein TRQ2_0271 257777 - 257382 - | superoxide reductase TRQ2_0272 258302 - 257790 - | rubrerythrin TRQ2_0273 258584 - 259114 + | XRE family transcriptional regulator TRQ2_0274 259139 - 259531 + | S-adenosylmethionine decarboxylase proenzyme TERM 275 260144 - 260127 - g 70 -9.1 -3.34013 | GATGCCCTCAAGGAA GACGGAG TCTT CTCCGCC GAGACGGAAGACCCG TERM 276 260351 - 260333 - g 76 -5.3 -4.7416 | CGAAAAGGTGAAAAA CTTCAAC AAAGA GCTGAAG TACTACAACGAAGAA TRQ2_0275 259545 - 260426 + | spermidine synthase TERM 277 260432 - 260447 + F 100 -11.8 -5.05505 | opp_overlap 260432 ACTGATGTGAATCGA CCCCGC TCCG GCGGGG TTTTTCCTTTCTGGT TERM 278 260447 - 260432 - f 79 -11.8 -2.53995 | opp_overlap 260432 ACTGATGTGAATCGA CCCCGC TCCG GCGGGG TTTTTCCTTTCTGGT TRQ2_0276 260500 - 261831 + | RNA modification protein TRQ2_0277 261794 - 262654 + | phospholipase D/transphosphatidylase TRQ2_0278 262632 - 263438 + | Cof-like hydrolase TRQ2_0279 263428 - 264132 + | hypothetical protein TRQ2_0280 264493 - 264134 - | DNA polymerase beta subunit TRQ2_0281 264957 - 264475 - | 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase TRQ2_0282 265492 - 264962 - | hypothetical protein TERM 279 265811 - 265783 - g 75 -3.1 -5.20781 | GAGTACAAAATAAAA CCCATCACTCCCA TCT TGAGAAAAATAGG TGTCTACAGGCTCTT TRQ2_0283 265546 - 266391 + | NAD+ synthetase TERM 280 266975 - 266965 - g 71 -6.8 -4.13304 | AAAGCATCGCCAAAA CCCA GCT TGGG GCGAAAAAAGAGTTC TRQ2_0284 266418 - 268346 + | lipopolysaccharide biosynthesis protein TERM 281 268368 - 268344 - T 89 -8.5 -4.72986 | opp_overlap 268347, overlap 268345 268347 TACGTGGAGGAAAAA TGAGGAGGGGA TTT TCCCCTCCTTT TATTTTTCACTGCAG TERM 282 268367 - 268345 - T 88 -12 -3.4331 | opp_overlap 268347, overlap 268344 268347 ACGTGGAGGAAAAAT GAGGAGGGGA TTT TCCCCTCCTT TTATTTTTCACTGCA TERM 283 268365 - 268347 - T 100 -14.6 -3.28472 | opp_overlap 268347, overlap 268345 268344 GTGGAGGAAAAATGA GGAGGGGA TTT TCCCCTCC TTTTATTTTTCACTG TERM 284 268347 - 268365 + T 100 -14.6 -5.2853 | opp_overlap 268347 268345 268344 GTGGAGGAAAAATGA GGAGGGGA TTT TCCCCTCC TTTTATTTTTCACTG TRQ2_0286 271264 - 269843 - | hypothetical protein TERM 285 270485 - 270463 - G 72 -6.2 -4.3739 | GACTCGCTGAGAAAA GATCGGGGTA CTT TCCGCCGATC ATCGTGAGCTCTCCC TRQ2_0287 271892 - 271275 - | HAD family hydrolase TRQ2_0288 273078 - 271876 - | hypothetical protein TERM 286 271984 - 271963 - G 72 -8.8 -3.55444 | overlap 271966 TCCGTACTCTCCAAA GAAGGTGT TCAGAG ACACCTTC ACCGTGTGTTCTTCT TRQ2_0289 276058 - 273080 - | polysaccharide export protein TERM 287 273983 - 273970 - G 74 -8.1 -3.85698 | opp_overlap 273970 GCTGGTTTTGAGAAA CGGTG ATCT CACCG CCGTCTCTCAGAACG TERM 288 274608 - 274644 + g 75 -10.1 -3.54926 | overlap 274606 274637 AACCTGTCCGTGTAC TTCTCCACGTAGACGAA CAC TCCGTCTTCGAGGGGAA TCTCTTTTTCCACTA TERM 289 276133 - 276143 + H 84 -6.8 -5.11063 | opp_overlap 276118 276117 276132 CGAACCAGAAATGAT TCGC TTA GCGA TTTTTATTCACTAAT TRQ2_0290 276261 - 276455 + | hypothetical protein TRQ2_0291 276470 - 276679 + | hypothetical protein TRQ2_0292 276698 - 276931 + | hypothetical protein TRQ2_0293 276924 - 277301 + | hypothetical protein TERM 290 277325 - 277298 - f 86 -9.8 -4.35581 | opp_overlap 277300 277304, overlap 277299 277300 277304 CGAAAAGATCGAAAA CTGAAAGCGGGG TCAT CCCCGCTTTCTC TTTTCCGGAGGTGAT TERM 291 277324 - 277299 - f 91 -13.3 -3.20264 | opp_overlap 277300 277304, overlap 277298 277300 277304 GAAAAGATCGAAAAC TGAAAGCGGGG TCAT CCCCGCTTTCT CTTTTCCGGAGGTGA TERM 292 277300 - 277323 + F 100 -16.8 -3.6422 | opp_overlap 277300 277299 277298 277304, overlap 277304 AAAAGATCGAAAACT GAAAGCGGGG TCAT CCCCGCTTTC TCTTTTCCGGAGGTG TERM 293 277323 - 277300 - f 100 -16.8 -2.51074 | opp_overlap 277300 277304, overlap 277299 277298 277304 AAAAGATCGAAAACT GAAAGCGGGG TCAT CCCCGCTTTC TCTTTTCCGGAGGTG TERM 294 277304 - 277319 + F 100 -11.8 -4.45168 | opp_overlap 277300 277299 277298 277304, overlap 277300 GATCGAAAACTGAAA GCGGGG TCAT CCCCGC TTTCTCTTTTCCGGA TERM 295 277319 - 277304 - f 93 -11.8 -3.9373 | opp_overlap 277304 277300, overlap 277300 277299 277298 GATCGAAAACTGAAA GCGGGG TCAT CCCCGC TTTCTCTTTTCCGGA TRQ2_0294 277344 - 277751 + | mannosyl-glycoprotein endo-beta-N-acetylglucosamidase TERM 296 278031 - 278065 + G 71 -7.2 -4.1585 | gap 1, overlap 278064 CAGATACCATTTCTT CGGGAACTTCCTGTT CTCCTC GGCAGGG-GTTCCCG TTTTAAACGTTCTGG TERM 297 278322 - 278302 - g 71 -6.9 -4.05747 | opp_overlap 278302, overlap 278289 278303 278316 278317 CACATCTTAGAGAAA GTCCAAGTT GAG AACTTGGAA TACCTTCCAAACCTG TERM 298 278321 - 278303 - g 73 -10.4 -3.02966 | opp_overlap 278302, overlap 278289 278302 278316 278317 ACATCTTAGAGAAAG TCCAAGTT GAG AACTTGGA ATACCTTCCAAACCT TRQ2_0295 277777 - 279003 + | exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase TERM 299 279353 - 279341 - g 72 -4.8 -4.56775 | opp_overlap 279341 AGCCGGTGTTAAAAA CGTG ATCTA CACG GTTCATGGATGGTGG TRQ2_0296 278982 - 280139 + | glycosyl transferase group 1 TERM 300 280977 - 280967 - g 79 -4 -5.1523 | TTTACAACAGAAAAA TAGT CAA ACTA GTAAACAAAATACAA TERM 301 281384 - 281361 - g 79 -11.2 -3.32579 | opp_overlap 281361, overlap 281356 CAATAAAACAGTCAA TCTAATCTTC ACAG GAAGATTAGA TTTTTCCCCGAATAT TERM 302 281361 - 281384 + G 95 -11.2 -4.57837 | opp_overlap 281361 281356 CAATAAAACAGTCAA TCTAATCTTC ACAG GAAGATTAGA TTTTTCCCCGAATAT TRQ2_0297 280687 - 281910 + | glycosyl transferase group 1 TERM 303 282289 - 282306 + G 100 -4.2 -5.81622 | opp_overlap 282289 TAAAAAAAATTTAAA GAAACT ACTGAA AGTTTC TTTTTTTGCTTTTCT TRQ2_0298 281918 - 283198 + | hypothetical protein TRQ2_0299 283495 - 283818 + | rhamnosyltransferase, putative TRQ2_0300 283990 - 285147 + | CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase TRQ2_0301 285163 - 285720 + | glycerol-3-phosphate cytidylyltransferase TRQ2_0302 285779 - 286678 + | glycosyl transferase family protein TRQ2_0303 286687 - 287583 + | glucose-1-phosphate thymidylyltransferase TERM 304 287919 - 287905 - g 73 -4.3 -4.81212 | CCGAGGAGAACAAAA GAATG CTCTT CATTC CCAGGGGGTTTGGGC TRQ2_0304 287580 - 288146 + | dTDP-4-dehydrorhamnose 3,5-epimerase TRQ2_0305 288143 - 289171 + | dTDP-glucose 4,6-dehydratase TERM 305 289898 - 289875 - g 95 -11.8 -3.93262 | GCTCAAGAGAGCAAA GCAGGAAGAT TTTA ATCTTCCCGC GAAAAGGCCTAAGTT TRQ2_0306 289168 - 290019 + | dTDP-4-dehydrorhamnose reductase TERM 306 290345 - 290334 - g 82 -3 -5.52384 | GGTGTACTAAAAAAA GATT TTAT AATC ATATCATTTGCTCTG TERM 307 290999 - 291015 + G 70 -5.1 -4.53705 | TGCCAGCTTCCCTGC CACTGCT ATT ATCAGTG TTTTATATACCAATT TRQ2_0307 290022 - 291389 + | polysaccharide biosynthesis protein TRQ2_0309 292144 - 293334 + | glycosyl transferase group 1 TRQ2_0310 293331 - 294596 + | polysaccharide biosynthesis protein TRQ2_0311 294616 - 296355 + | asparagine synthase TERM 308 296528 - 296491 - f 83 -7.1 -4.85599 | opp_overlap 296480 296489 296485 296484 296491, overlap 296499 CTCATTCGATAAAAA CGTACGAATTTATCGAA TCTG TTCGATAAATACCGACG TGTTTAGTTTTCAAG TERM 309 296520 - 296499 - f 71 -8.9 -3.30575 | opp_overlap 296480 296491 296489 296485 296484, overlap 296491 ATAAAAACGTACGAA TTTATCGAA TCTG TTCGATAAA TACCGACGTGTTTAG TRQ2_0312 296824 - 297051 + | excinuclease ABC subunit C TRQ2_0313 297079 - 298299 + | CRISPR-associated RAMP Cmr1 family protein TRQ2_0314 298296 - 299396 + | hypothetical protein TRQ2_0315 299374 - 302358 + | CRISPR-associated Csx11 family protein TRQ2_0316 302355 - 303329 + | CRISPR-associated RAMP Cmr4 family protein family protein TRQ2_0317 303313 - 303705 + | hypothetical protein TRQ2_0318 303712 - 304608 + | hypothetical protein TRQ2_0319 305321 - 304917 - | PilT domain-containing protein TRQ2_0320 306106 - 305324 - | hypothetical protein TERM 310 305899 - 305875 - G 80 -6.5 -4.83615 | opp_overlap 305879, overlap 305883 GATGTTCGATAAAAA CGCACGAATTT ATC AAATTCATTCG ATAAATACCGACATG TRQ2_0321 307691 - 306294 - | AAA ATPase TERM 311 307774 - 307735 - H 100 -13.8 -3.8647 | opp_overlap 307735 307734 307758, overlap 307736 307748 307757 307766 ACTTATTATACCAAA CCGTCCGAATTTATCGAA CACA TTCGATAAACTCGTACGA ATTTATCGATTACAT TERM 312 307735 - 307774 + H 70 -9.4 -2.98368 | opp_overlap 307735 307736 307748 307757 307766, overlap 307734 307758 ACTTATTATACCAAA CCGTCCGAATTTATCGAA CACA TTCGATAAACTCGTACGA ATTTATCGATTACAT TERM 313 307773 - 307736 - H 89 -15.1 -2.914 | opp_overlap 307735 307734 307758, overlap 307735 307748 307757 307766 CTTATTATACCAAAC CGTCCGAATTTATCGAA CACA TTCGATAAACTCGTACG AATTTATCGATTACA TERM 314 307793 - 307748 - H 74 -10.7 -2.52795 | opp_overlap 307735 307734 307758, overlap 307736 307735 307757 307766 AACCGTCCGAATTTA TCGAACACATTCGATAAACTC GTAC GAATTTATCGATTACATTCGA TAAATACCTACAAGT TERM 315 307807 - 307766 - H 72 -8.2 -3.9226 | opp_overlap 307735 307734 307758, overlap 307736 307735 307757 307748 AACACATTCGATAAA CTCGTACGAATTTATCGA TTACAT TCGATAAATACCTACAAG TTGAAACCAGTCCGT TRQ2_0322 307954 - 309111 + | ATPase TRQ2_0323 309516 - 309166 - | DNA polymerase beta subunit TERM 316 309199 - 309217 + gT 79 -8.2 -4.29981 | overlap 309209 309211 AACCACTCCACCCTC GATCATCT TCG AGATGGTC TTTTCCATCTGTTTG TRQ2_0324 309877 - 309467 - | HEPN domain-containing protein TRQ2_0326 311362 - 310283 - | UDP-N-acetylglucosamine 2-epimerase TERM 317 310950 - 310936 - G 70 -5 -4.52589 | TGCTTGGACAGAAAA GAATCT GAG AGACTC GATCTGTGACGATCC TRQ2_0327 312453 - 311359 - | hypothetical protein TERM 318 312007 - 312018 + g 82 -5.8 -5.13473 | GATACACAGGTCAGA CAGC TGAA GCTG TTTTTTGAATATCCT TRQ2_0328 313169 - 312459 - | hypothetical protein TERM 319 313011 - 312986 - G 83 -8.9 -4.25848 | overlap 312974 312975 312987 AAGGCCCGAGGAAAA CCCCGGCGTAC AGCT GAACACCGGGA AGCAGTTCGTACGCC TERM 320 313010 - 312987 - G 74 -10.2 -3.15027 | overlap 312974 312975 312986 AGGCCCGAGGAAAAC CCCGGCGTAC AGCT GAACACCGGG AAGCAGTTCGTACGC TRQ2_0329 314044 - 313169 - | beta-lactamase domain-containing protein TERM 321 313364 - 313400 + g 73 -4.3 -4.83169 | ACTTTCTGCGACTTC CAGAACGGCGTTGATGA TGT TCTCCACTGCCTTTCTG TTTTTCTCCACAAGT TRQ2_0330 314168 - 314503 + | uncharacterized protein-like protein TERM 322 314526 - 314505 - T 100 -15.9 -3.46212 | opp_overlap 314505 314508, overlap 314508 AGGACGGAGAATGAA GAAGGGCGC CGAA GCGCCCTTC TTTCATATCTTCAGG TERM 323 314505 - 314526 + T 100 -15.9 -3.93262 | opp_overlap 314505 314508, overlap 314508 AGGACGGAGAATGAA GAAGGGCGC CGAA GCGCCCTTC TTTCATATCTTCAGG TERM 324 314508 - 314523 + T 93 -11.8 -4.086 | opp_overlap 314505 314508, overlap 314505 ACGGAGAATGAAGAA GGGCGC CGAA GCGCCC TTCTTTCATATCTTC TERM 325 314523 - 314508 - T 93 -11.8 -3.86312 | opp_overlap 314508 314505, overlap 314505 ACGGAGAATGAAGAA GGGCGC CGAA GCGCCC TTCTTTCATATCTTC TRQ2_0331 314756 - 314529 - | ribosomal protein S18 TERM 326 314604 - 314623 + g 72 -4.9 -4.63928 | CATTCTCTGATGCTT GGCGCAC GTTCCG GTGAGCC TTTTTGGAATGATCT TRQ2_0332 315196 - 314771 - | single-strand binding protein TRQ2_0333 315582 - 315196 - | ribosomal protein S6 TRQ2_0334 316114 - 315659 - | DtxR family iron dependent repressor TERM 327 315835 - 315857 + g 71 -10.6 -2.63073 | overlap 315834 ACGCACCCTTTTCTG CCTCTTCCTC ATC GAGGAACAGG ATCTTCTTCAAAAAC TRQ2_0335 316497 - 316135 - | hypothetical protein TERM 328 316424 - 316436 + g 76 -7.7 -4.24599 | GTGTCCACAGGTTCA CCTTC TGG GAAGG TTTCGTTGTTTTCTT TRQ2_0336 317837 - 316494 - | uncharacterized FAD-dependent dehydrogenase-like protein TRQ2_0337 319481 - 317841 - | phosphotransferase domain-containing protein TRQ2_0338 321600 - 319495 - | monosaccharide-transporting ATPase TERM 329 321037 - 321027 - G 73 -4 -4.77173 | opp_overlap 321018 321023, overlap 321023 TCTCGAGAAAAGAAA GAAA TCT TTTC CTTTCCTTCTCATCT TRQ2_0339 322872 - 321610 - | binding-protein-dependent transport systems inner membrane component TERM 330 323790 - 323765 - g 82 -13.3 -3.05521 | overlap 323788 ACGATAGCGGGAAGA CCCTACGTGGA AAGC TCCACGAAGGG GAAGTTCACCTGGAG TRQ2_0340 322967 - 324226 + | extracellular solute-binding protein TERM 331 324227 - 324247 + F 100 -14 -5.34857 | GAGTACGGTGAGTGA GCGGGAGG CTGTT CCTCCCGC TTTTCTTTTGTTTAA TRQ2_0341 324351 - 325667 + | xanthine/uracil/vitamin C permease TRQ2_0342 325706 - 326446 + | extracellular solute-binding protein TERM 332 326505 - 326533 + G 90 -13.2 -3.49618 | overlap 326506 TAATCTACCGCTCCT TCTGAAGGGTGC CCTGA GCACCCTTCAGC TTACTTCTCTGGCCG TERM 333 326506 - 326532 + G 95 -16.7 -2.69449 | overlap 326505 AATCTACCGCTCCTT CTGAAGGGTGC CCTGA GCACCCTTCAG CTTACTTCTCTGGCC TRQ2_0343 326461 - 327111 + | polar amino acid ABC transporter, inner membrane subunit TRQ2_0345 329454 - 327781 - | penicillin-binding protein 2 TRQ2_0344 327108 - 327836 + | ABC transporter related TERM 334 329067 - 329083 + gT 78 -8.7 -4.03078 | AACCAACCACGTGTG GTGCGAG CGG CTCGTAC TTTCTCCTGTAATCC TRQ2_0346 329795 - 329451 - | hypothetical protein TERM 335 329754 - 329741 - G 75 -6.7 -4.45261 | GAAAGAAACTCAAAA CGTCT TGGA AGACG TAGTCCCAGAAGATG TRQ2_0347 330415 - 329792 - | hypothetical protein TRQ2_0348 331425 - 330415 - | cell shape determining protein MreB TERM 336 332448 - 332418 - g 88 -8.5 -4.74132 | gap 2, overlap 332419 332447 AGATGTGAGGAAAAA GGTGATC-C-TTGTG GAT CACAACGAGATCACC CAGGCACCGGAAGGA TERM 337 332436 - 332419 - g 73 -9.9 -3.43756 | overlap 332418 GATGTGAGGAAAAAG GTGATCC TTGT GGATCAC AACGAGATCACCCAG TRQ2_0349 331498 - 333144 + | inorganic diphosphatase TRQ2_0350 333141 - 334046 + | hypothetical protein TERM 338 334415 - 334405 - gf 74 -2.4 -5.18357 | GAAGTGAGGAAAAAA CTCG ATT CGGG GGCGTTTGGAAAGAT TRQ2_0351 333976 - 335058 + | oxidoreductase domain-containing protein TERM 339 335664 - 335641 - g 89 -11 -4.07568 | opp_overlap 335663, overlap 335625 335642 335644 CCTTCTCGTGGAAAA GGAGGACCCT CTGG AGGGTCCTCG CGATAGTCGTCGTTT TERM 340 335663 - 335642 - g 88 -14.5 -3.04398 | overlap 335625 335641 335644 CTTCTCGTGGAAAAG GAGGACCCT CTGG AGGGTCCTC GCGATAGTCGTCGTT TERM 341 335661 - 335644 - g 75 -11.3 -3.08032 | overlap 335642 335641 TCTCGTGGAAAAGGA GGACCCT CTGG AGGGTCC TCGCGATAGTCGTCG TRQ2_0352 335055 - 335762 + | rhomboid family protein TRQ2_0353 337053 - 335749 - | nucleotide sugar dehydrogenase TRQ2_0354 338462 - 337047 - | radical SAM domain-containing protein TERM 342 337202 - 337231 + g 73 -2.1 -5.11475 | opp_overlap 337202, overlap 337203 337215 TGCTTTCGAAATCCA CTCTGAAGCCCTT GAGT AAGTTCTTCAGAA TTTTCTCTTTTTTTC TERM 343 337215 - 337238 + g 86 -4.6 -5.60993 | opp_overlap 337202, overlap 337203 337202 CACTCTGAAGCCCTT GAGTAAGTTC TTCA GAATTTTCTC TTTTTTTCTCAGAAC TERM 344 337483 - 337513 + g 70 -9.8 -3.06796 | overlap 337481 TTTTCTATCTGCTCA TCAGTGATGTCCTT TTT AAGGATGTCCCTGA TTCGCTGCGATCCCG TERM 345 337880 - 337853 - G 77 -10.6 -3.34398 | gap 1, overlap 337851 337856 GTTTTCCGGGAAAGA CAC-CCAGCGATG GAA CAACGCTGGAGTG AGGCAAAAAATCGTT TERM 346 337876 - 337856 - G 73 -11.1 -2.54325 | overlap 337853 337851 TTCCGGGAAAGACAC CCAGCGATG GAA CAACGCTGG AGTGAGGCAAAAAAT TERM 347 338412 - 338393 - G 87 -10.7 -4.0342 | opp_overlap 338393 CGGAAGGAACAACAA GGGCGAC TCGAAC GTCGCCC TTTGTCTCCGTTTCT TERM 348 338393 - 338412 + g 87 -10.7 -4.11897 | opp_overlap 338393 CGGAAGGAACAACAA GGGCGAC TCGAAC GTCGCCC TTTGTCTCCGTTTCT TRQ2_0355 338892 - 338467 - | thioesterase-like protein TRQ2_0356 340721 - 338889 - | ATP-dependent metalloprotease FtsH TERM 349 339593 - 339606 + g 76 -8.1 -4.11216 | overlap 339584 CCGCAAGAAGCGCCG CCTCG TTTA CGAGG TTTTCCAGATCCGCC TERM 350 340250 - 340268 + g 79 -8.8 -4.02253 | overlap 340242 CGTCCTTGAAGGTGA CCCTCTTG TTC CCAGAGGG TTTGTACATTGTTGC TERM 351 340348 - 340328 - G 77 -11.9 -2.87132 | TGTTCCTTCCAGAGA GGCTCCTCA TGA TGAAGAGCC ACACGACAATGAAGA TERM 352 340663 - 340650 - G 80 -6.7 -4.87665 | TTCGACGTAGAAAAA TCTGG CGAG CCAGA AAAGTGTGACTATTA TRQ2_0357 341952 - 340708 - | tRNA(Ile)-lysidine synthetase TRQ2_0358 342196 - 342963 + | pyrroline-5-carboxylate reductase TERM 353 343206 - 343188 - g 74 -10.4 -3.25942 | opp_overlap 343192 AGTGGGCGAGATCAA CAGAGAAA TCG TTTCTCTG CTGACCTTCACAGGA TERM 354 343462 - 343440 - g 70 -4.8 -4.46072 | opp_overlap 343441, overlap 343441 GGGAATAAAGAGAAA GGCCGTCA GAAGAGA TGACGGCT CCTTTGAGGATGTGC TRQ2_0359 342964 - 343503 + | GCN5-related N-acetyltransferase TRQ2_0360 347603 - 343500 - | DNA polymerase III, alpha subunit TERM 355 346336 - 346309 - G 77 -7 -4.386 | opp_overlap 346309, overlap 346310 GAATTCTCCAGAAAA CCGAGGAATTCC GGTA GAACTTCCTCGA TGCTTCTCTTGTTTT TERM 356 346819 - 346835 + g 72 -5.1 -4.56093 | GGAGAGTTGTCCATC CTTTTCG CTT CGGGAAG TTTTGTGATTCCCTT TRQ2_0361 348087 - 347590 - | crossover junction endodeoxyribonuclease RuvC TRQ2_0362 349177 - 348170 - | S-adenosylmethionine--tRNA-ribosyltransferase-isomerase TRQ2_0363 350615 - 349152 - | apolipoprotein N-acyltransferase TRQ2_0364 351759 - 350608 - | DegT/DnrJ/EryC1/StrS aminotransferase TERM 357 350959 - 350973 + g 71 -3.5 -4.8667 | gap 1, overlap 350959 CTTTGAATATCTCTC CGCCGC TTCT GCG-CG TTTTTCTACGATCTC TERM 358 351812 - 351792 - R 100 -16.9 -5.2422 | AATGATATCAAAAAA TCCCCCTCC ACC GGAGGGGGA AAGATCACCAAAGGG TRQ2_0365 353235 - 351856 - | protease Do TRQ2_0366 353349 - 354233 + | signal recognition particle-docking protein FtsY TERM 359 354527 - 354514 - g 88 -8.1 -4.74103 | GGTCGAATTGAAAAA CGTGG AGAA CCACG TGGAAGCGATCAAGC TRQ2_0367 354230 - 354886 + | hypothetical protein TRQ2_0368 354862 - 356526 + | peptidase M23 TRQ2_0369 356528 - 356941 + | BadM/Rrf2 family transcriptional regulator TERM 360 356969 - 356931 - T 73 -4.7 -4.83518 | gap 2, opp_overlap 356939 356943, overlap 356936 356939 356943 AACAAGAAGAGAAAA TGAAACAATGAAGCCCGCT TCC AGCGGGCT-CATT-TTACT TTCAGGCTGAGTTTT TERM 361 356965 - 356936 - T 87 -10.1 -4.32571 | gap 1, opp_overlap 356939 356943, overlap 356931 356939 356943 GAAGAGAAAATGAAA CAATGAAGCCCGCT TCC AGCGGGCT-CATTT TACTTTCAGGCTGAG TERM 362 356939 - 356962 + T 100 -11.8 -4.55128 | gap 1, opp_overlap 356939 356936 356931 356943, overlap 356943 GAGAAAATGAAACAA TGAAGCCCGCT TCC AGCGGGCT-CA TTTTACTTTCAGGCT TERM 363 356962 - 356939 - T 95 -11.8 -4.23876 | gap 1, opp_overlap 356939 356943, overlap 356936 356931 356943 GAGAAAATGAAACAA TGAAGCCCGCT TCC AGCGGGCT-CA TTTTACTTTCAGGCT TERM 364 356959 - 356943 - T 100 -13.7 -3.66349 | opp_overlap 356939 356943, overlap 356939 356936 356931 AAATGAAACAATGAA GCCCGCT TCC AGCGGGC TCATTTTACTTTCAG TERM 365 356943 - 356959 + T 93 -13.7 -3.22314 | opp_overlap 356943 356939 356936 356931, overlap 356939 AAATGAAACAATGAA GCCCGCT TCC AGCGGGC TCATTTTACTTTCAG TRQ2_0370 357154 - 356960 - | hypothetical protein TRQ2_0371 357826 - 357158 - | sugar fermentation stimulation protein TERM 366 357673 - 357688 + g 76 -4 -5.00616 | ATTCTGCACGCTTCA GGAGAA CTCT TTTTCC TTTTTTCAAAAGCGG TRQ2_0372 358296 - 357823 - | hypothetical protein TRQ2_0373 359602 - 358223 - | major facilitator transporter TRQ2_0374 360150 - 359599 - | hypothetical protein TERM 367 360429 - 360416 - g 70 -2.3 -5.00616 | opp_overlap 360416 CTTTGCTGGAAAAAA GCTCA AATC TGTGC CTTTCAATCTCAGGT TERM 368 360467 - 360489 + G 70 -2.1 -5.00616 | gap 1 CGTACAAAAGATACT TGTGGA-GTT TTTA AACGTCTACA TTTTTTCAGAAAAAA TRQ2_0375 360237 - 360776 + | hypothetical protein TRQ2_0376 361853 - 360798 - | magnesium and cobalt transport protein CorA TERM 369 361915 - 361896 - R 100 -15 -5.09259 | TATTTTAAAACAAAA GGCGCACC CGAA GGTGCGCC AGTCCGAACCTTAGA TRQ2_0377 362483 - 361935 - | Ferritin Dps family protein TRQ2_0378 363313 - 362561 - | phosphotransferase domain-containing protein TERM 370 362859 - 362879 + g 83 -4 -5.36441 | opp_overlap 362863 GCCCAGAGATACCAC GAAAGATG TTCTT CATCTTGC TTTTTTCTATCCGGA TERM 371 364588 - 364607 + G 82 -7.8 -4.69326 | opp_overlap 364588 CGATGGAAGGAATGA GGCTGGTT GATT ATCCAGCC TTTTCTGTTCAATAT TRQ2_0379 363525 - 364703 + | carbamoyl-phosphate synthase, small subunit TERM 372 367611 - 367583 - g 71 -6.8 -4.03413 | gap 1, opp_overlap 367588 367591, overlap 367585 ACCGTCGCAGACAAA GACAAGAG-GGAA GCCG TTCCTCTCTTGGC TCACCTCGCAGACAT TRQ2_0380 364703 - 368002 + | carbamoyl-phosphate synthase, large subunit TERM 373 367987 - 368038 + T 84 -6.7 -5.1287 | gap 2, opp_overlap 367998 367999, overlap 367996 367998 367998 GAGAAGACTCACCGA CAC-ATGGAAAATG-TGAAGGGCCC TGAA GGGCCCTTCACCATATTTCTTCGAG TTTTTTACATATGAG TERM 374 367996 - 368028 + T 93 -11.4 -4.25615 | gap 1, opp_overlap 367998 367999, overlap 367987 367998 367998 CACCGACACATGGAA AATG-TGAAGGGCCC TGAA GGGCCCTTCACCATA TTTCTTCGAGTTTTT TERM 375 367998 - 368025 + T 93 -15.6 -2.8136 | opp_overlap 367998 367999, overlap 367996 367987 367998 CCGACACATGGAAAA TGTGAAGGGCCC TGAA GGGCCCTTCACC ATATTTCTTCGAGTT TERM 376 368025 - 367998 - T 100 -15.6 -4.26188 | opp_overlap 367998 367996 367987 367998, overlap 367999 CCGACACATGGAAAA TGTGAAGGGCCC TGAA GGGCCCTTCACC ATATTTCTTCGAGTT TERM 377 367998 - 368026 + T 100 -14 -3.70741 | gap 1, opp_overlap 367998 367999, overlap 367998 367996 367987 CCGACACATGGAAAA TG-TGAAGGGCCC TGAA GGGCCCTTCACCA TATTTCTTCGAGTTT TERM 378 368024 - 367999 - T 100 -19.1 -3.15231 | opp_overlap 367998 367998 367996 367987, overlap 367998 CGACACATGGAAAAT GTGAAGGGCCC TGAA GGGCCCTTCAC CATATTTCTTCGAGT TRQ2_0381 369085 - 368021 - | 3-isopropylmalate dehydrogenase TERM 379 368393 - 368369 - G 73 -11.5 -2.60992 | opp_overlap 368385 368386, overlap 368366 AATGTCTCCAAACAT GTTCGTTGTGA GGA TCACATCGAAC TGCGATGGTTTCAGG TRQ2_0382 369583 - 369089 - | 3-isopropylmalate dehydratase, small subunit TRQ2_0383 370847 - 369594 - | 3-isopropylmalate dehydratase, large subunit TRQ2_0384 372390 - 370849 - | 2-isopropylmalate synthase TERM 380 371522 - 371532 + g 77 -6.8 -4.55295 | AGGAACACGTTCTCT CCCA CTA TGGG TTTGTTTCTGGACGG TERM 381 372259 - 372249 - G 74 -8.2 -3.83998 | overlap 372256 GCACGGGAGATGAAA CGGG AAA CCCG GCTTCGATGAGATCG TERM 382 372282 - 372256 - G 76 -9.4 -3.73509 | overlap 372249 AGATGAAACGGGAAA CCCGGCTTCGAT GAG ATCGACGCCAAG ATCCTCCAACATGAG TRQ2_0385 373993 - 372377 - | 2-isopropylmalate synthase/homocitrate synthase family protein TRQ2_0386 375670 - 374006 - | dihydroxy-acid dehydratase TERM 383 375134 - 375144 + g 74 -6.8 -4.25458 | overlap 375120 CGCGAGATCTTCTAT CGCT TTG AGCG TTTCTTCATCGACTT TRQ2_0387 376670 - 375660 - | ketol-acid reductoisomerase TERM 384 376141 - 376178 + g 74 -10.6 -3.19687 | gap 1, opp_overlap 376141 376138, overlap 376139 GTCTCTATCACACCA GCTCTCGTC-ACGCCGA TACCT TTGGCGTAGGCGAGCGC TATATCTTTGGCCTT TERM 385 376362 - 376382 + g 91 -8.3 -5.06505 | GTGGGCAAACATCAG CATCTTACC CTC GGTGAGGTG TTTTTCTATGTACTT TRQ2_0388 377185 - 376670 - | acetolactate synthase, small subunit TRQ2_0389 378927 - 377182 - | acetolactate synthase, large subunit, biosynthetic type TERM 386 379528 - 379504 - g 83 -2.1 -5.74122 | gap 1, overlap 379506 GAGTACATAAAAAAA CGGAAGCTCT TCTTCG AG-GCATCCG TGGGTGGGGGTATTC TERM 387 379877 - 379889 + G 74 -5.5 -4.56597 | AAAAGCTGAAGCTGA TCGGG GAA CTCGA TTTTTCAACAAACAG TERM 388 380102 - 380116 + G 73 -10 -3.44229 | opp_overlap 380090 380089, overlap 380090 380089 AAGTGCTCGGCGGTG CCGAGA AGT TCTCGG TTGTGGTGATGAAGT TRQ2_0390 379156 - 381318 + | aspartate kinase TRQ2_0391 381318 - 382364 + | threonine synthase TERM 389 382800 - 382824 + G 82 -10.9 -3.62348 | opp_overlap 382798 382813, overlap 382798 AAAACGGAAGTCATC TTGATTTCGAA AAG TTCGAAATCGA TCTTTCTCTCACATT TRQ2_0392 382361 - 383206 + | homoserine kinase TRQ2_0393 383218 - 383952 + | ABC transporter related TERM 390 384631 - 384609 - g 72 -10.6 -2.88427 | AAGACCCTCGAGACA CTCCTCACGA TGC CCGTGAAGAG AGAACACATCGCACT TRQ2_0394 383934 - 385172 + | ABC-2 type transporter TRQ2_0395 386294 - 385164 - | malate dehydrogenase TERM 391 385299 - 385309 + g 80 -5.4 -5.0133 | AAGCATGTTCTTTGT GATC TTC GATC TTTTTTCCACAGCTC TERM 392 385943 - 385957 + g 72 -5 -4.68456 | opp_overlap 385943 AGCTCGGCTCTAAAC TCTTCA CAA TGGAGA TTATTTTTTCCTCAT TRQ2_0396 386794 - 386300 - | tartrate/fumarate subfamily Fe-S type hydro-lyase beta subunit TRQ2_0397 387602 - 386784 - | tartrate/fumarate subfamily Fe-S type hydro-lyase alpha subunit TRQ2_0398 387648 - 388916 + | pyridoxal-phosphate dependent TrpB-like enzyme TERM 393 389654 - 389627 - g 78 -6.4 -4.62441 | gap 1 TGGGAGAGAAAGAAA TCCACTTCGA-GT GTC ACGTTGAAGTGGA CAACATGGAACTGAA TERM 394 389731 - 389716 - g 75 -3.2 -5.19916 | overlap 389718 AAAAGATTGAAAAAA TACGGG ATAA CCCACA CCACCGTTCAGCTCG TRQ2_0399 388930 - 389784 + | cation diffusion facilitator family transporter TRQ2_0400 392057 - 389781 - | hypothetical protein TRQ2_0401 392638 - 392054 - | hypothetical protein TERM 395 392603 - 392582 - G 74 -3.7 -5.00616 | gap 1 TTCTTTCCGAAAAAA CAACCAGCCC CCC GGG-TAGTCG AAAAACCTCAAATCT TERM 396 392790 - 392818 + r 80 -4.6 -5.31519 | gap 1, opp_overlap 392792, overlap 392790 392794 AGACAAGACACAAAG TAT-GGGAGGGAC GAAA GTCCCTCCTTGTG TTTTTATTTAGGTAT TERM 397 392794 - 392813 + r 100 -13.6 -4.22352 | opp_overlap 392792, overlap 392790 392790 AAGACACAAAGTATG GGAGGGAC GAAA GTCCCTCC TTGTGTTTTTATTTA TRQ2_0402 393439 - 392822 - | hypothetical protein TRQ2_0403 394027 - 393446 - | ECF subfamily RNA polymerase sigma-24 factor TERM 398 393560 - 393577 + g 76 -4.9 -4.88407 | overlap 393560 TCCATCAAGCCATCT GAGAAAG ATCT CTTTTTC TTTTTCATTCAATAG TERM 399 393560 - 393571 + g 89 -4.4 -5.67529 | overlap 393560 TCCATCAAGCCATCT GAGA AAGA TCTC TTTTTCTTTTTCATT TRQ2_0404 395579 - 394029 - | binding-protein-dependent transport systems inner membrane component TRQ2_0405 396558 - 395593 - | binding-protein-dependent transport systems inner membrane component TERM 400 396134 - 396124 - G 82 -6.8 -4.73388 | AATGGCCAGGAAAAA CCCT GGA AGGG CAATTCCACTGAAAG TRQ2_0406 398356 - 396617 - | extracellular solute-binding protein TRQ2_0407 399541 - 398372 - | oligopeptide/dipeptide ABC transporter, ATPase subunit TERM 401 398773 - 398759 - G 74 -8.6 -3.87815 | opp_overlap 398747 CTGCAGTTTGAGAAA CAGGTT TAT AACCTG TGCCTGAACGGAAAC TRQ2_0408 399770 - 399558 - | hypothetical protein TRQ2_0409 400708 - 399767 - | methionyl-tRNA formyltransferase TRQ2_0410 401967 - 400705 - | GTP-binding protein HflX TRQ2_0411 402211 - 401939 - | RNA chaperone Hfq TRQ2_0412 403166 - 402249 - | tRNA delta(2)-isopentenylpyrophosphate transferase TRQ2_0413 403927 - 403163 - | hypothetical protein TERM 402 403612 - 403593 - G 82 -7.8 -4.71426 | opp_overlap 403595, overlap 403595 CCTTCAGGAAGAAAA GCGGCCAT GAGT ATGGCCTC GCTTCCAAGACCAAA TRQ2_0414 404769 - 404137 - | hypothetical protein TERM 403 404351 - 404366 + g 100 -3.3 -6.09196 | overlap 404341 404362 TACACCTTCACAGGG TCTTC CACTGC GAAGA TTTTTTTCTTTTCGA TERM 404 404407 - 404431 + g 90 -12.9 -3.53444 | overlap 404408 404420 TTGGTACGCGTTGCT TTTCAGCACCG TGT CGGTGCTGAAC TTTCCCGCGGAGTGG TERM 405 404408 - 404430 + g 95 -16.4 -2.71924 | overlap 404407 404420 TGGTACGCGTTGCTT TTCAGCACCG TGT CGGTGCTGAA CTTTCCCGCGGAGTG TRQ2_0415 406171 - 404780 - | heat shock protein HslVU, ATPase subunit HslU TRQ2_0416 406713 - 406183 - | 20S proteasome A and B subunits TERM 406 406633 - 406623 - G 71 -6.8 -4.07568 | CGTTTCCCTTCAAAA CGGT CGA ACCG AAAGTGACCTGACCG TERM 407 406914 - 406900 - g 79 -4.3 -5.16132 | CACATGAAAACAAAA GAAGA CGAGT TCTTC CTGAAAAAAGAGATA TERM 408 406955 - 406935 - g 100 -7.5 -5.53079 | AAAAGAGATAAAAAA GAAGGTCTG TTG CAGTCCCTC TGACACAGCCGATGC TERM 409 407732 - 407716 - g 73 -2.1 -5.14965 | overlap 407717 AGGGTGAGGAAAAAA TCGGAAG AAG CCCCCGC AGTTGTCAGGGTAAG TRQ2_0417 406795 - 407871 + | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase TRQ2_0418 407868 - 408797 + | putative GAF sensor protein TERM 410 408788 - 408817 + T 100 -13 -4.15565 | gap 1, opp_overlap 408788 408789, overlap 408777 408789 CGAACTCGTATCAAA G-GTGGTGTGAGG TTCTC CCTCACACCACTC TTTTGAAGTGCTCGA TERM 411 408816 - 408788 - T 100 -13.2 -3.74747 | opp_overlap 408777 408788 408789, overlap 408789 CGAACTCGTATCAAA GGTGGTGTGAGG TTCTC CCTCACACCACT CTTTTGAAGTGCTCG TERM 412 408789 - 408815 + T 100 -16.7 -3.67634 | opp_overlap 408788 408789, overlap 408777 408788 GAACTCGTATCAAAG GTGGTGTGAGG TTCTC CCTCACACCAC TCTTTTGAAGTGCTC TERM 413 408815 - 408789 - T 100 -16.7 -2.84527 | opp_overlap 408777 408789 408788, overlap 408788 GAACTCGTATCAAAG GTGGTGTGAGG TTCTC CCTCACACCAC TCTTTTGAAGTGCTC TRQ2_0419 409001 - 408807 - | hypothetical protein TRQ2_0420 409612 - 408998 - | hypothetical protein TERM 414 409495 - 409483 - G 100 -9.1 -5.42975 | TCAGAGAAAGAAAAA GGGTC ATA GACCC AAGGGTGTAACTGGG TERM 415 409508 - 409530 + g 73 -10.6 -2.94726 | opp_overlap 409498, overlap 409503 409501 CCCAAGGGTGTAACT GGGAGATCCT GCC AGAATCTCCC TGTAATATTCTAACA TRQ2_0421 410541 - 409609 - | peptidase C11 clostripain TERM 416 410674 - 410655 - R 74 -3.6 -5.16206 | AAATCAAGAGAAAAA GACTACCT GTTA AGATAATC AAACTTCTTGCCCTG TRQ2_0422 411568 - 410657 - | putative radical SAM protein TERM 417 411219 - 411265 + g 71 -9.6 -3.22223 | gap 2, overlap 411253 TCGGACACGAGATCG GGCCTCGTGGA-GACAG-AGAG CTGGA CTATACTGTCGTCCACGAGGGC TTCCTCGTAGCGTTC TRQ2_0423 411640 - 413373 + | prolyl-tRNA synthetase TERM 418 413748 - 413723 - g 70 -10.4 -2.50511 | opp_overlap 413723 413747, overlap 413722 413720 413715 TGGAGAAGTGAAGAG GGTGAACGGG GTTCTT CCCGTTCTCC TTTCTCTTTCAGAAA TERM 419 413723 - 413748 + G 91 -11.1 -4.32857 | opp_overlap 413722 413720 413715 413723, overlap 413747 TGGAGAAGTGAAGAG GGTGAACGGGG TTCT TCCCGTTCTCC TTTCTCTTTCAGAAA TRQ2_0424 413370 - 414875 + | Mg chelatase, subunit ChlI TRQ2_0425 415306 - 414872 - | flagellar export protein FliJ TRQ2_0426 415416 - 415997 + | phage SPO1 DNA polymerase-related protein TRQ2_0427 415999 - 416517 + | MarR family transcriptional regulator TRQ2_0428 416514 - 417443 + | NAD-dependent epimerase/dehydratase TERM 420 417565 - 417586 + GT 100 -12.3 -5.1101 | ATCCTTTATGGACCA CCGGGGTCT GGTA AGACCTCGG TTTTTTCACTGCTGA TERM 421 418057 - 418041 - gT 78 -6.6 -4.57569 | CCAGGCGTTCAAAAA CAAGAG GGCAA CTCTTG AAGATCTGGAAACTC TERM 422 419201 - 419189 - gT 73 -4.9 -4.63107 | overlap 419183 AGGAAACAACGAAAA TTTTC GAA GAAAA GTTCAGCGTTTGATG TRQ2_0429 417415 - 419214 + | appr-1-p processing domain-containing protein TERM 423 419250 - 419221 - T 86 -13.7 -2.83522 | opp_overlap 419226, overlap 419226 AGCGTTTGATGAAAC CAAAAGAAGGGGC AAAC GCCCCTTCTTTTT TTAAGACCTCTGAGG TERM 424 419226 - 419245 + T 100 -13.6 -5.41143 | opp_overlap 419221 419226 TTGATGAAACCAAAA GAAGGGGC AAAC GCCCCTTC TTTTTTTAAGACCTC TERM 425 419245 - 419226 - T 100 -13.6 -4.58773 | opp_overlap 419226, overlap 419221 TTGATGAAACCAAAA GAAGGGGC AAAC GCCCCTTC TTTTTTTAAGACCTC TERM 426 419397 - 419371 - T 100 -6.4 -5.75822 | opp_overlap 419376, overlap 419376 CAGAAAGTAAAAAAA GTAAAGGGGGCC TTT GGCCCCCTTGTT ATCATTTAGAATTCT TERM 427 419376 - 419392 + T 100 -15.1 -3.93216 | opp_overlap 419376 419371 AGTAAAAAAAGTAAA GGGGGCC TTT GGCCCCC TTGTTATCATTTAGA TERM 428 419392 - 419376 - T 100 -15.1 -4.53225 | opp_overlap 419376, overlap 419371 AGTAAAAAAAGTAAA GGGGGCC TTT GGCCCCC TTGTTATCATTTAGA TERM 429 419416 - 419432 + T 79 -3.7 -5.31275 | ATTTAGAATTCTTCA GGAATAC TCG GTGTTTC TTTTTTCTCCTCGGG TRQ2_0430 421019 - 419403 - | chaperonin GroEL TERM 430 419923 - 419935 + g 76 -4.1 -4.92756 | GCGAGTTTTGCCATC CTTTC CTG GAGAG TTTCTTTTTCGTACT TERM 431 420148 - 420167 + g 70 -2.1 -5.00196 | CCTCCGGTGAGAATT GCTATGT CCTGAA GCATGGC TTTTCTTCTTTCACC TRQ2_0431 421312 - 421034 - | chaperonin Cpn10 TERM 432 421506 - 421478 - H 100 -12.5 -4.65078 | opp_overlap 421484 421485, overlap 421485 AGAGGTTGAAGAAAA GTAAAAAGGCGCT TGA AGCGCCCTTTTTC TGGTGGAGGCGGGGG TERM 433 421484 - 421500 + H 87 -7.9 -4.91109 | opp_overlap 421478 421485, overlap 421485 TGAAGAAAAGTAAAA AGGCGCT TGA AGCGCCC TTTTTCTGGTGGAGG TERM 434 421485 - 421499 + H 85 -11.4 -3.54183 | opp_overlap 421478 421485, overlap 421484 GAAGAAAAGTAAAAA GGCGCT TGA AGCGCC CTTTTTCTGGTGGAG TERM 435 421499 - 421485 - H 100 -11.4 -5.17786 | opp_overlap 421485 421484, overlap 421478 GAAGAAAAGTAAAAA GGCGCT TGA AGCGCC CTTTTTCTGGTGGAG TRQ2_0432 422000 - 423037 + | binding-protein-dependent transport systems inner membrane component TRQ2_0433 423051 - 423992 + | binding-protein-dependent transport systems inner membrane component TRQ2_0434 424005 - 425009 + | oligopeptide/dipeptide ABC transporter, ATPase subunit TRQ2_0435 425013 - 426167 + | oligopeptide/dipeptide ABC transporter, ATPase subunit TRQ2_0436 426164 - 426652 + | hypothetical protein TERM 436 427123 - 427104 - g 77 -3.6 -5.09426 | CGGAACCCGAAAAAA GAATGAAC AACT ATCCATTC GAATTCTCAGGTGGA TRQ2_0437 426665 - 427657 + | oligopeptide/dipeptide ABC transporter, ATPase subunit TRQ2_0438 427641 - 428495 + | hypothetical protein TRQ2_0439 428508 - 429068 + | DNA polymerase III, epsilon subunit TERM 437 429308 - 429280 - g 70 -5.2 -4.44974 | opp_overlap 429284, overlap 429281 429297 429298 GGAAATCTCAGAAAA GGAATCCCGCTG GAGAA CGGCGGAATTCT CCGCGTCATGGTTTT TRQ2_0440 429073 - 430329 + | PhoH family protein TRQ2_0441 430797 - 430294 - | segregation and condensation protein B TERM 438 430376 - 430405 + g 78 -5.2 -5.00611 | opp_overlap 430376, overlap 430376 CTTTCAACAAACGAA GGGGA-AAGCTGAT ACAG AT-AGCTTTTCCCC TTTCTTTTCTTTCTG TRQ2_0442 431464 - 430775 - | chromosome segregation and condensation protein ScpA TRQ2_0443 432460 - 431474 - | tryptophanyl-tRNA synthetase TRQ2_0444 432527 - 433132 + | hypothetical protein TRQ2_0445 433104 - 433838 + | silent information regulator protein Sir2 TRQ2_0446 433835 - 434359 + | hypothetical protein TRQ2_0447 435188 - 434340 - | protein-(glutamine-N5) methyltransferase, release factor-specific TERM 439 434616 - 434628 + gT 71 -3.3 -4.87133 | opp_overlap 434607 CGAAAGGATCATCTC GATCG ATG CGAAC TTTTCTTTGAACGGT TRQ2_0448 435445 - 435137 - | hypothetical protein TRQ2_0449 435518 - 435802 + | hypothetical protein TRQ2_0450 435774 - 436442 + | binding-protein-dependent transport systems inner membrane component TRQ2_0451 436537 - 437487 + | NMT1/THI5-like domain-containing protein TERM 440 437578 - 437560 - g 72 -8.8 -3.57144 | opp_overlap 437538 437535 437561, overlap 437561 CCTTGGAGGTTCAAA GGGGAGAG ATC CTCTCCCT TGTGGGACCATCCGG TERM 441 437561 - 437577 + G 81 -12.3 -3.29511 | opp_overlap 437560 437561, overlap 437538 437535 CTTGGAGGTTCAAAG GGGAGAG ATC CTCTCCC TTGTGGGACCATCCG TERM 442 437577 - 437561 - g 78 -12.3 -2.74144 | opp_overlap 437538 437535 437561, overlap 437560 CTTGGAGGTTCAAAG GGGAGAG ATC CTCTCCC TTGTGGGACCATCCG TRQ2_0452 437484 - 438191 + | ABC transporter related TRQ2_0453 442422 - 438175 - | CoA-substrate-specific enzyme activase TERM 443 439003 - 439013 + g 88 -5.4 -5.57054 | TATCTTTTCCCTGCA TCCT TCA AGGA TTTTTTTCGCTTCTT TERM 444 440170 - 440182 + g 76 -4.7 -4.75309 | opp_overlap 440168 440170 CGAGAAATCGAAATA GCCCG TCA CGAGC TTTTCTTCCATTTCA TERM 445 441593 - 441605 + g 72 -5.5 -4.44046 | TCCCCATCTCTTGCC TGCTG GAA CGGCA TTTCTTTGAACTCGA TERM 446 442742 - 442726 - H 74 -10.9 -2.62983 | CTCAGTGGTAGAGCA CCAGCTT GCC AAGCTGG GGGTCGCGGGTTCGA TERM 447 442782 - 442807 + H 100 -10.5 -5.30616 | opp_overlap 442785, overlap 442785 CCCGCTCCAGACAAG AAAGAAGGGGA AATC TCCCCTTCTTC TTTTTCTTTACGTCG TERM 448 442785 - 442804 + H 100 -12.2 -4.72696 | opp_overlap 442785, overlap 442782 GCTCCAGACAAGAAA GAAGGGGA AATC TCCCCTTC TTCTTTTTCTTTACG TERM 449 442804 - 442785 - H 95 -12.2 -4.38927 | opp_overlap 442782 442785 GCTCCAGACAAGAAA GAAGGGGA AATC TCCCCTTC TTCTTTTTCTTTACG TERM 450 443452 - 443472 + G 86 -11.9 -3.50358 | overlap 443454 443459 443461 ATCTTCTTCCACTGA TACCCGTTC TGG GAACGGGTG TTCTCATACTTATTT TERM 451 443454 - 443470 + G 85 -12.3 -3.31133 | overlap 443452 443459 443461 CTTCTTCCACTGATA CCCGTTC TGG GAACGGG TGTTCTCATACTTAT TRQ2_0454 442839 - 443987 + | hypothetical protein TERM 452 444498 - 444479 - g 79 -4.4 -5.1615 | gap 1 GGAACATTCAAAAAA GAGATCGAA GAG TTC-ATCTC CAAAGGATTCGCGAG TERM 453 444973 - 444955 - g 78 -6.6 -4.62471 | overlap 444950 AAGGGAGATAGAAAA GCGAGGTG TTT CCCCTCAC CTTCCCTTCAAAGAT TERM 454 445746 - 445766 + G 74 -10.5 -3.14344 | GGCGGCTTCCTTACG CGTCTTTGA AGA TCAAAGGCG TTCGTCACAACAATC TRQ2_0455 443984 - 446734 + | excinuclease ABC, A subunit TRQ2_0456 446754 - 446984 + | preprotein translocase, SecG subunit TERM 455 447120 - 447145 + G 71 -6.9 -4.08216 | gap 1 GGATCCCTCAAGGCC CGACCTGCATTT GGG ACATGC-GGTCG TTTTGAGGAAGCTGA TRQ2_0457 446989 - 448194 + | tyrosyl-tRNA synthetase TRQ2_0458 448277 - 449479 + | S-layer domain-containing protein TRQ2_0459 449514 - 450755 + | hypothetical protein TERM 456 450799 - 450772 - f 87 -11.2 -3.63068 | opp_overlap 450776, overlap 450776 CCACACCACCGCAAA TCAACCCCCGGC ACTT GCCGGGGGTTTT GTTTTGTTGTATAAT TERM 457 450776 - 450795 + F 100 -16.4 -5.31091 | opp_overlap 450772 450776 ACCACCGCAAATCAA CCCCCGGC ACTT GCCGGGGG TTTTGTTTTGTTGTA TERM 458 450795 - 450776 - f 100 -16.4 -3.53298 | opp_overlap 450776, overlap 450772 ACCACCGCAAATCAA CCCCCGGC ACTT GCCGGGGG TTTTGTTTTGTTGTA TERM 459 450874 - 450863 - f 72 -7.2 -4.07687 | opp_overlap 450865, overlap 450849 450864 AGCCGGTCTTGAAAA CCGG TGGG CCGG AAGGCCCGTGTGGGT TERM 460 450912 - 450925 + F 100 -9.5 -5.26119 | CCACCGCCTCCGCCA GCCCC GCAC GGGGC TTTTCTTTTTAGGGG TERM 461 451375 - 451362 - g 74 -8.1 -3.92602 | CGAAGAGTTGAGAAA CAGGG ATAT CCCTG TTAAAATAATCACTG TRQ2_0460 450949 - 451473 + | isochorismatase hydrolase TERM 462 452463 - 452489 + G 72 -10.2 -2.87564 | opp_overlap 452470 452478, overlap 452470 GAGATAAGTCCGTGG TTCCAAAGGATG AAT CCTCCTTTGGAG TGTGTCCAGAACTCG TRQ2_0461 451484 - 452779 + | hypothetical protein TRQ2_0462 452793 - 453674 + | pyridoxine biosynthesis protein TRQ2_0463 453678 - 454244 + | SNO glutamine amidotransferase TERM 463 454411 - 454452 + G 86 -8.8 -4.46212 | gap 1, opp_overlap 454411 454410 CGTACCTGAGAAGAT TCCGGAAGGTGT-GCTGGA CGTGA TCGATCCACGCCTTCCGGA TTTTCTGCTGAGAAG TRQ2_0464 454241 - 454870 + | putative diguanylate cyclase TERM 464 455001 - 455028 + F 81 -3.4 -5.39721 | overlap 455005 TTAAAATCTCTCCTT TACATGTTCCTC CTCT GCGGAACATTTG TTTTTTCTATCGTCA TERM 465 455005 - 455024 + G 85 -6.4 -5.16969 | overlap 455001 AATCTCTCCTTTACA TGTTCCTC CTCT GCGGAACA TTTGTTTTTTCTATC TERM 466 455746 - 455760 + G 72 -2.8 -5.03747 | GTGGAGGAGTGGAAG CGGTTT ATC AGATCG TTTTTTCCAAGATTT TRQ2_0465 455004 - 455900 + | hypothetical protein TERM 467 456292 - 456274 - g 80 -6.8 -4.60487 | opp_overlap 456291 GACTATTTTGAAAAA GAACAAAA AAG TTTCGTTC AAAGAGAGTCTTCTT TERM 468 456382 - 456405 + G 79 -2.4 -5.45652 | opp_overlap 456364 GAAACTGATAAACCC GTTACTCCTT GCAG AAGAAGGAAC TTTTTTCTTACCCAT TRQ2_0466 455897 - 456490 + | uncharacterized protein-like protein TRQ2_0467 456483 - 456851 + | response regulator receiver protein TRQ2_0468 456844 - 458181 + | protein serine/threonine phosphatase TRQ2_0469 458181 - 458942 + | hypothetical protein TERM 469 459023 - 459033 + GF 77 -6.8 -4.53163 | opp_overlap 459022 GTTTATGATGAAACT CCCA TAG TGGG TTTTGTACTGTCTCC TERM 470 459109 - 459132 + GF 100 -13.2 -4.13995 | overlap 459110 CTTTGCAAGTTTTTC GGAAGGGGAG CCCT CTCTCCTTCC TTTCATTTATGACAA TERM 471 459301 - 459316 + GF 72 -6.1 -4.2408 | overlap 459304 459305 AAATATTTTCTTTTT CACGG AGAAAC CCGTG TTTCTCGTTTTGTCG TRQ2_0470 458951 - 459667 + | hypothetical protein TERM 472 459740 - 459722 - gf 82 -8.9 -4.15543 | opp_overlap 459720 459722 GAAAGAGGTTGAAAA GAGGTTC GGACT GAACCTC TCTTCTTACAAACCA TERM 473 459722 - 459740 + GF 74 -9.6 -3.38812 | opp_overlap 459722, overlap 459720 GAAAGAGGTTGAAAA GAGGTTCG GAC TGAACCTC TCTTCTTACAAACCA TERM 474 459966 - 459956 - gf 76 -4 -5.0538 | TTTGATTGCAAAAAA TTCT CTG AGAA TGAAGTTCTGGAGTG TRQ2_0471 459609 - 460457 + | MCP methyltransferase, CheR-type TERM 475 460524 - 460549 + GF 85 -6.1 -5.10029 | opp_overlap 460517 460526, overlap 460526 ATAGCAAGCGAGATA CACGGAACTTT CTTT ATAGTTCCGGG TTTTTTGAGATTCGT TRQ2_0472 460458 - 461018 + | lipoprotein signal peptidase TRQ2_0473 460876 - 461811 + | RluA family pseudouridine synthase TERM 476 462188 - 462168 - g 77 -6.9 -4.4648 | ATCTTCATGAGAAAA GTCTTCG GACTCGA CGAAGAC GTTCAGGGTTTTCCA TERM 477 462386 - 462376 - g 73 -4 -4.85599 | overlap 462380 TCGAGGTGATAAAAA GAAA GGG TTTC ACCCCGTACATCTAC TERM 478 462390 - 462380 - g 85 -6.8 -4.96501 | overlap 462376 GGTGATAAAAAGAAA GGGT TTC ACCC CGTACATCTACACGG TRQ2_0474 461808 - 464336 + | DNA polymerase III, alpha subunit TRQ2_0475 464401 - 466245 + | 4-phytase TERM 479 466250 - 466280 + T 93 -9.1 -4.93454 | gap 1, opp_overlap 466255, overlap 466252 466255 CAGAAGAGTAAAAAA TAA-AAGGGGCTCC TTTC GGAGCCCCTTCTTC TTTTCTCTTTGTTTC TERM 480 466252 - 466277 + T 100 -13.3 -4.50487 | opp_overlap 466255, overlap 466250 466255 GAAGAGTAAAAAATA AAAGGGGCTCC TTTC GGAGCCCCTTC TTCTTTTCTCTTTGT TERM 481 466274 - 466255 - T 100 -15 -5.45813 | opp_overlap 466252 466250 466255 GAGTAAAAAATAAAA GGGGCTCC TTTC GGAGCCCC TTCTTCTTTTCTCTT TERM 482 466255 - 466274 + T 100 -15 -4.30704 | opp_overlap 466255, overlap 466252 466250 GAGTAAAAAATAAAA GGGGCTCC TTTC GGAGCCCC TTCTTCTTTTCTCTT TRQ2_0476 471368 - 466296 - | DNA-directed RNA polymerase, beta' subunit TERM 483 470442 - 470456 + g 75 -2.8 -5.24449 | overlap 470443 GAGGCTGGTAGAAGT CGTGAT CTG ATCACC TTTTTTCACTTTCTG TRQ2_0477 475176 - 471385 - | DNA-directed RNA polymerase, beta subunit TERM 484 472431 - 472441 + g 74 -5.4 -4.60255 | CTCTGATGATTCCGT TCTC ATC GAGA TTTTTCAGAAGTTCT TERM 485 475208 - 475227 + r 71 -4.9 -4.45664 | opp_overlap 475208 475207 GTGGAATAAGAAACT CCCAGGA TTTCTC TCCCGGG TTTTGCTTAGATTGA TERM 486 475336 - 475309 - R 100 -15.6 -5.30339 | opp_overlap 475303 ATTAAAACACAAAAA CCCTGTACCGGC AAGA GGCGGTACAGGG TTGAAACATTCTTTT TERM 487 475392 - 475403 + r 80 -4.4 -5.17744 | overlap 475398 TCTACCTCAGCACCG GCTT CTTC AAGC TTTTTCTTGATATCT TRQ2_0478 475753 - 475367 - | ribosomal protein L7/L12 TERM 488 475457 - 475471 + g 72 -4.9 -4.57073 | GCTCTTAATGATTGC GTCGG GTGAA CCGGC TTTTTCAACGAGATC TRQ2_0479 476308 - 475769 - | ribosomal protein L10 TERM 489 476358 - 476331 - R 100 -17.2 -5.75945 | opp_overlap 476338 476340 ACCTCCCAAAAAAAA TTTTGTGGACCC CGGA GGGTCCACAAAA AGGTCATAGAACCTT TRQ2_0480 477151 - 476450 - | ribosomal protein L1 TRQ2_0481 477600 - 477175 - | ribosomal protein L11 TERM 490 477618 - 477642 + r 73 -6.4 -4.43501 | gap 1, overlap 477602 TCGAACCTCCCTATG CGTGGTGCGGA TTCC TCCTC-CCACG TTTTCTCACTCGATT TRQ2_0482 478709 - 477648 - | NusG antitermination factor TERM 491 478014 - 478027 + g 70 -5.3 -4.46656 | GAACACATAACCCGG GAAGA GTTT TCTTC TTTTCGTCTTGTAGA TRQ2_0483 478918 - 478721 - | preprotein translocase, SecE subunit TERM 492 478955 - 478945 - R 74 -2.4 -5.21709 | overlap 478947 CCTCAGATCAAAAAA TGGC AGG GCCG GCAGGACTCGAACCC TRQ2_0484 479174 - 479025 - | ribosomal protein L33 TERM 493 479088 - 479098 + g 80 -6.8 -4.61747 | GTACTTTCTCAGTTC GAGC TTT GCTC TTTTGTCCTTGTTCC TERM 494 479564 - 479548 - H 100 -12.3 -4.20868 | opp_overlap 479551 GTGTTAAAATAATAA GGAGAGC CGT GCTCTCC TTCAGGAACTGGTGG TERM 495 479838 - 479824 - g 73 -2.1 -5.10497 | overlap 479825 AACGGATCGAAAAAA CGATC GTCAA GATCA TGACCAAAAAGGAGG TRQ2_0485 479706 - 479858 + | hypothetical protein TERM 496 479873 - 479849 - f 100 -12.9 -4.78107 | opp_overlap 479846, overlap 479850 GATCATGACCAAAAA GGAGGGCTGAA AAC TTCAGCCCTCT AAGCTTATATGTTAG TERM 497 479872 - 479850 - f 100 -16.4 -3.46141 | opp_overlap 479846, overlap 479849 ATCATGACCAAAAAG GAGGGCTGAA AAC TTCAGCCCTC TAAGCTTATATGTTA TRQ2_0486 479949 - 480611 + | thymidylate synthase, flavin-dependent TERM 498 480900 - 480874 - g 72 -6.6 -4.26903 | opp_overlap 480863 CTCACTGGAGGAAAA TCCAGTTGTCAA AGA TTGGAAACTGGA AATAGATGGTCCAGG TERM 499 480946 - 480932 - g 85 -6.4 -5.24129 | overlap 480937 CTGGTGGACAAAAAA GAACTC GAA GAGCTC GTTAAAATCGAGAAA TERM 500 481200 - 481216 + G 82 -7.9 -4.59773 | GAGACTTCTATTCTT CCTCTCC ACT GGTGAGG TTTTTCACCATGAGC TERM 501 481874 - 481860 - g 79 -4.2 -5.11937 | AAGAAGCGGAAAAAA CGAGGA ATT TCATCG GTGGAATTGGATGGA TRQ2_0487 480608 - 482743 + | surface antigen (D15) TERM 502 483231 - 483218 - g 79 -3.1 -5.31275 | GTTCATCATAAAAAA CGAAA AAGA TCTCG AAAACGCTATAAAAG TERM 503 483842 - 483823 - g 75 -10 -3.60502 | overlap 483837 483838 ACAGAGACGTTGAAA GAGCGCTC GAAA AAGCGCTC AGAGCGAAGAAAATA TRQ2_0488 482757 - 483899 + | phosphoribosylaminoimidazole carboxylase, ATPase subunit TRQ2_0489 483887 - 484402 + | phosphoribosylaminoimidazole carboxylase, catalytic subunit TERM 504 484475 - 484498 + F 95 -8.1 -5.38054 | opp_overlap 484476, overlap 484466 484476 ACCGAGGGGGAACTC ACCCCTTCG GTCGTG CGAAGGGGA TTTTTCTTTATAGAG TERM 505 484476 - 484497 + F 91 -11.6 -3.81748 | opp_overlap 484476, overlap 484466 484475 CCGAGGGGGAACTCA CCCCTTCG GTCGTG CGAAGGGG ATTTTTCTTTATAGA TERM 506 484497 - 484476 - f 77 -11.6 -2.53263 | opp_overlap 484466 484476 484475 CCGAGGGGGAACTCA CCCCTTCG GTCGTG CGAAGGGG ATTTTTCTTTATAGA TRQ2_0490 484523 - 485737 + | small GTP-binding protein TERM 507 485908 - 485884 - g 72 -2.8 -5.03314 | gap 1, overlap 485885 485886 TTCATGGTGAAAAAA GC-CTGCGCCC TTTT GAACACAGAGC TCGGTTATCTGGACG TERM 508 486252 - 486240 - g 71 -7.7 -3.91882 | overlap 486235 TCAGGAGAAAGAGAA GGAGT TCT ACTCC ATAAGAAAACCAGGA TERM 509 486705 - 486690 - g 74 -3.9 -4.91852 | GCCAGGAAAAATAAA CCCGG TTGTTC CCGAG TACGTGATGCAAATC TRQ2_0491 485734 - 487110 + | fumarate lyase TRQ2_0492 488528 - 487098 - | carbohydrate kinase FGGY TERM 510 487806 - 487782 - G 71 -7.7 -3.98159 | overlap 487775 487777 CATGACAACACGAAA CGCGCCGCTCG TTC CGATCGTCACG GTGGCTGAATCAGGA TERM 511 488113 - 488124 + g 73 -2.2 -5.1356 | ATCGAACAGAACTTT TTCG CATT CGAG TTTTTCTTCATCCAC TRQ2_0493 489808 - 488525 - | hypothetical protein TERM 512 489034 - 489055 + g 71 -3.7 -4.80882 | gap 1, overlap 489034 489035 TGTATTTCACGTGAA G-TTGAGAGC TGA GCTCGCAAGC TTTTTCGTATGCCCT TERM 513 489701 - 489715 + g 75 -2.8 -5.2696 | GCGGGTGTAATCTGT GTGC ACCACCA GCAC TTTTTTCACTTTTCC TRQ2_0494 490580 - 489822 - | short-chain dehydrogenase/reductase SDR TRQ2_0495 492031 - 490586 - | hypothetical protein TRQ2_0496 492682 - 492038 - | GntR family transcriptional regulator TERM 514 492490 - 492480 - G 88 -5.4 -5.60993 | TCGGTTACAAAAAAA CCAA CCC TTGG AACCACCTTCACAAG TRQ2_0497 494088 - 492679 - | 6-phosphogluconate dehydrogenase, decarboxylating TERM 515 493947 - 493957 + g 74 -5.4 -4.60255 | GTTCTATCTCTTCAT TCGT TAC ACGA TTTTTCACAAATTCT TERM 516 494119 - 494139 + r 72 -6.9 -4.20042 | opp_overlap 494119 TTTTATTTCAGCAGA GCTTTACCT TCG ATGTAAAGC TTTTCGAATCTTGAT TRQ2_0498 495446 - 494106 - | glycoside hydrolase family protein TERM 517 495375 - 495362 - G 72 -8.1 -3.66908 | overlap 495358 TCGCTCCAAAATCAA GGAGG TTAA CCTCC CGATCGGGTATCTCA TRQ2_0499 496552 - 495449 - | alcohol dehydrogenase TERM 518 497869 - 497857 - g 84 -7.7 -4.86731 | opp_overlap 497868 TTCTGGTAAAGAAAA CCACT GGT AGTGG GACCTCTCTCTTCAT TRQ2_0500 496773 - 498704 + | extracellular solute-binding protein TRQ2_0501 498723 - 500066 + | pectinesterase TERM 519 500129 - 500088 - f 77 -7.4 -4.41348 | gap 1, opp_overlap 500099 500100, overlap 500098 500100 TTCTTTCCAAACAAA TCTTTAAAAACAGCGGGGC CTGAT GCCCCGC-ATTTTGAAAGT CTAAAGAAGGGGGAG TERM 520 500120 - 500098 - f 78 -6.1 -4.6526 | opp_overlap 500099 500100, overlap 500088 500100 ACAAATCTTTAAAAA CAGCGGGGC CTGAT GCCCCGCAT TTTGAAAGTCTAAAG TERM 521 500099 - 500119 + F 81 -9.6 -4.13014 | opp_overlap 500098 500088 500100, overlap 500100 CAAATCTTTAAAAAC AGCGGGGC CTGAT GCCCCGCA TTTTGAAAGTCTAAA TERM 522 500100 - 500118 + F 86 -13.1 -3.07487 | opp_overlap 500098 500088 500100, overlap 500099 AAATCTTTAAAAACA GCGGGGC CTGAT GCCCCGC ATTTTGAAAGTCTAA TERM 523 500118 - 500100 - f 100 -13.1 -3.9318 | opp_overlap 500100 500099, overlap 500098 500088 AAATCTTTAAAAACA GCGGGGC CTGAT GCCCCGC ATTTTGAAAGTCTAA TERM 524 500536 - 500521 - g 72 -9 -3.59966 | AGATCTCATAGAGAA GATGGC AGCG GCCATC AGAGAGGACATGAGG TERM 525 501802 - 501790 - g 72 -4.8 -4.67353 | CTACTCACCCAAAAA CCTG GTCGA CAGG GTGAACGCCATCCTT TRQ2_0502 500150 - 502468 + | glycoside hydrolase family 3 protein TRQ2_0503 503561 - 502473 - | hypothetical protein TERM 526 502529 - 502560 + g 73 -8 -4.08394 | opp_overlap 502529 502527 502531 TCTCCAGGGAGAAGA CATGTCCTTCAGGG AACA CTCTGAAGGAAAGG TTTTCGGGCGACTGT TERM 527 503262 - 503239 - G 93 -10.3 -4.50193 | opp_overlap 503242 ATGAATGAACCAAAA GGAGCGTCC ATGTAG AGACGCTCC TTACCGTGAAAGTAA TRQ2_0504 504547 - 503558 - | Acetyl xylan esterase TRQ2_0505 505961 - 504549 - | glycoside hydrolase family protein TERM 528 505243 - 505227 - G 76 -8.7 -4.15565 | opp_overlap 505233 CGCAGCAGGTGAAAA GTCCACG TCC CATGGAC TCTTCGGCTCCCAGT TRQ2_0506 507004 - 505982 - | oligopeptide/dipeptide ABC transporter, ATPase subunit TERM 529 506476 - 506461 - G 71 -7.6 -3.94067 | opp_overlap 506474, overlap 506475 CATCACACAGAACAA GCTTTG GCTT CAAAGC GATCGCACGTGCGAT TERM 530 506832 - 506856 + g 82 -12.9 -2.87132 | CTCATGATGAGTTTT GCCGTTGTGGT CTT ACCACAACCGC TCTCTCCAACAAGCC TRQ2_0507 507986 - 506991 - | oligopeptide/dipeptide ABC transporter, ATPase subunit TRQ2_0508 509101 - 507998 - | binding-protein-dependent transport systems inner membrane component TERM 531 508975 - 508958 - G 75 -2.7 -5.1675 | gap 1 GTACGGAGCAAAAAA CTCGCAGA ATA TC-GCAAG AACGTAGATTATTAA TRQ2_0509 510095 - 509112 - | binding-protein-dependent transport systems inner membrane component TERM 532 509396 - 509370 - G 73 -10.2 -3.01001 | overlap 509365 TATCCTCAAAGGATA CTTCCAGAACAC TTT GTTCTCTGGAAG CCCCTTGGAGAGTGC TRQ2_0510 512121 - 510154 - | extracellular solute-binding protein TERM 533 512182 - 512141 - R 93 -12.3 -3.5394 | gap 1, opp_overlap 512142, overlap 512142 512145 AAACCTCCCTTCAAA TTGATGATTTCCGGGCGGGG AGT CCCCGCCCGGAGAG-ATCAT TTAGAAGACATGAGA TERM 534 512181 - 512142 - R 100 -15.8 -2.72043 | gap 1, opp_overlap 512142, overlap 512141 512145 AACCTCCCTTCAAAT TGATGATTTCCGGGCGGGG AGT CCCCGCCCGGAGAG-ATCA TTTAGAAGACATGAG TERM 535 512142 - 512181 + r 100 -18 -3.53811 | gap 1, opp_overlap 512141 512142 512145 AACCTCCCTTCAAAT TGATGATTTCCGGGCGGGG AGT CCCCGCCCGGAGAG-ATCA TTTAGAAGACATGAG TERM 536 512181 - 512145 - R 100 -16.8 -2.64155 | gap 2, opp_overlap 512142, overlap 512142 512141 CTCCCTTCAAATTGA TGAT-T-TCCGGGCGGGG AGT CCCCGCCCGGAGAGATCA TTTAGAAGACATGAG TRQ2_0511 513276 - 512179 - | Pectate lyase/Amb allergen TRQ2_0512 513529 - 514800 + | extracellular solute-binding protein TERM 537 514805 - 514824 + F 93 -10.7 -4.56597 | opp_overlap 514801 514803 GAAAGAAATAAGCCC GGAGGGG AACACC CCCCTCC TTTTTCACAAAACAC TRQ2_0513 514862 - 515719 + | binding-protein-dependent transport systems inner membrane component TRQ2_0514 515726 - 516544 + | binding-protein-dependent transport systems inner membrane component TERM 538 516753 - 516739 - g 78 -5 -5.02074 | overlap 516741 TCATTTCCGAAAAAA TCGTGA ACA TCACAA ACATATCAAAAGCAG TERM 539 518469 - 518490 + G 78 -11.7 -2.94194 | overlap 518460 GAATCTGCTGCCAAG GTCTTTCAG GCCG CTGAAAGAC TGTCTGAGCTTTCTG TRQ2_0515 516573 - 518543 + | methyl-accepting chemotaxis sensory transducer TRQ2_0516 518555 - 519862 + | NADH:flavin oxidoreductase/NADH oxidase TERM 540 520329 - 520318 - g 74 -5.8 -4.59109 | TACATGTGCGAAAAA CTCC TGGA GGAG ATCAGAAGAAAGGGT TERM 541 520907 - 520896 - g 74 -7.2 -4.32177 | GGATTTCACAAGAAA CCCC AGCT GGGG AAGCAAAAACGGGGA TRQ2_0517 519859 - 521853 + | fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein TERM 542 522354 - 522334 - g 83 -9.7 -4.07568 | CGGTTCTTTTTAAAA CTCTTGTCC TCT GGCCAAGAG ATACGGCTTATTACA TERM 543 523071 - 523055 - g 89 -10.9 -4.17491 | overlap 523047 AGTAAAGCTTGAAAA CTTCGAG GGG CTCGAAG GGGAGATAACATGCT TRQ2_0518 521871 - 523088 + | oxidoreductase domain-containing protein TERM 544 523292 - 523280 - g 88 -3.3 -5.69262 | opp_overlap 523280 TTAGAAAAAGAAAAA CCCGA TAT TCTGG TTATAAATACCGTTT TRQ2_0519 523082 - 524068 + | oxidoreductase domain-containing protein TERM 545 524142 - 524153 + G 75 -3 -5.24129 | TCCTCATCGGCTACA CTTT GGGG AAAG TTTTTTCTGAAGAAA TERM 546 524353 - 524339 - g 83 -4.2 -5.37345 | overlap 524342 TTCAAGGAGAAAAAA GAAGTG ATT CACGTC ACCGCAGTTACCGCA TERM 547 524384 - 524396 + G 75 -6.3 -4.38748 | overlap 524382 AACGTTGGCTATTTG GGATA TCC TATCC TTCTTTCTTTGTGGG TERM 548 524868 - 524910 + G 70 -4.8 -4.4572 | TCACTTCTGCCCTCG GTGGAGACAGTGAAACAGTG GGT TACGGTGTTACTCTCACCAC TTTCTTTGCCATCTT TRQ2_0520 524081 - 524971 + | auxin efflux carrier TRQ2_0522 525258 - 526352 + | iron-containing alcohol dehydrogenase TRQ2_0524 526941 - 526492 - | hypothetical protein TRQ2_0525 527753 - 526938 - | peptidase M23 TERM 549 527751 - 527739 - G 77 -3.4 -5.2197 | CAGAAAAAGCAAAAA GAAG CCTCT CTTC ATCCTCCCCATCCTT TRQ2_0526 528801 - 527767 - | response regulator receiver modulated CheB methylesterase TRQ2_0527 529246 - 528764 - | diacylglycerol kinase TRQ2_0528 529829 - 529227 - | pyruvate ferredoxin/flavodoxin oxidoreductase TRQ2_0529 530626 - 529826 - | thiamine pyrophosphate binding domain-containing protein TRQ2_0530 531132 - 530623 - | CMP/dCMP deaminase zinc-binding TERM 550 530837 - 530859 + g 70 -9.8 -2.97902 | TGCATCAATGCGTTC TGCTCCGCGT GTA GCGCGTAGCA TATCTCCTGGTGTTC TERM 551 531190 - 531168 - R 91 -8.4 -5.02323 | opp_overlap 531167 531168 GTATCACAAACAAAA GCGAGGGC TTTACGT ACCCTCGC CTTCTGTAGTATAAT TERM 552 531263 - 531244 - R 100 -13.6 -5.03314 | GGGAGGCCGAAAAAA GGGAGGAG GTTT CTCCTCCC GAAAGGAAACCTTAT TRQ2_0531 531616 - 531275 - | nitrogen regulatory protein P-II TRQ2_0532 532937 - 531630 - | ammonium transporter TERM 553 532077 - 532053 - G 72 -10.7 -2.8779 | opp_overlap 532065, overlap 532055 532065 AGAACTCACAGGAGA CACCACAGCAC ACG GTGCGGTGATG GCAACAAGGCCAGCA TERM 554 533062 - 533029 - H 90 -9.1 -4.59511 | gap 1, opp_overlap 533044, overlap 533037 533041 533044 AATATTCTTGAAAAA CAAAAAAACAAACACC ATG GG-GTTCGTTTTCTTG AGGGTACAAACCCCA TERM 555 533054 - 533037 - H 100 -2.7 -6.20267 | gap 1, opp_overlap 533044, overlap 533029 533041 533044 TGAAAAACAAAAAAA CAAACACC ATG GG-GTTCG TTTTCTTGAGGGTAC TERM 556 533082 - 533041 - H 91 -6.7 -5.36181 | opp_overlap 533044, overlap 533037 533029 533044 533074 AAACAAAAAAACAAA CACCATGGGGTTCGT TTTCTTGAGGGT ACAAACCCCATGTTG GATTGGATATTTATT TERM 557 533044 - 533079 + H 70 -9 -3.2128 | opp_overlap 533037 533029 533041 533044 533074 CAAAAAAACAAACAC CATGGGGTTCGTTTTC TTGA GGGTACAAACCCCATG TTGGATTGGATATTT TRQ2_0533 533245 - 533799 + | thymidine kinase TRQ2_0534 535000 - 533783 - | integral membrane sensor signal transduction histidine kinase TERM 558 533838 - 533860 + g 77 -9.2 -3.98913 | overlap 533839 CTTTCAAGAATTACC TTCGCTTTCA ATC TGGAAGCGAG TTCTTTGACTATGGA TERM 559 533839 - 533859 + g 73 -10.5 -2.98866 | overlap 533838 TTTCAAGAATTACCT TCGCTTTCA ATC TGGAAGCGA GTTCTTTGACTATGG TERM 560 534637 - 534666 + g 82 -11.5 -3.58037 | AAATCCTGTAGTTCC CTTCCGTGGAAAA CCCC TCTTCCACGGGAG TTTCGGGAGTTCCTA TRQ2_0535 535652 - 534981 - | two component transcriptional regulator TERM 561 535846 - 535864 + H 100 -14.6 -5.38054 | opp_overlap 535846 CCTCCCAGCCAGAAA GGGGATGC AAT GCATCCCC TTTTTCTTTATCCAC TERM 562 535864 - 535846 - H 100 -14.6 -3.91897 | opp_overlap 535846 CCTCCCAGCCAGAAA GGGGATGC AAT GCATCCCC TTTTTCTTTATCCAC TRQ2_0536 536059 - 537177 + | glutamine amidotransferase class-II TRQ2_0537 537185 - 538708 + | glutamate synthase (NADPH) TRQ2_0538 538705 - 539160 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein TERM 563 539244 - 539229 - g 71 -7.6 -3.94381 | AGAGAAGTTGACAAA GAAGGA GAAA TCCTTC TGATCACGGCAGAGA TRQ2_0539 539157 - 540434 + | FAD-dependent pyridine nucleotide-disulphide oxidoreductase TERM 564 540696 - 540684 - g 71 -3.3 -4.77157 | overlap 540666 540685 TGAACGCAGGAAAAA TCGTG GTT CACGG GCACGCGGGCGACAT TRQ2_0540 540422 - 541159 + | glutamate synthase alpha subunit TERM 565 541187 - 541164 - T 100 -12.4 -5.14965 | opp_overlap 541166, overlap 541166 ATGCGTATTAAAAAA GAGCTCCCGG GATT CCGGGAGCTT ATTTCACAATATAAG TERM 566 541185 - 541166 - T 100 -15 -4.20707 | opp_overlap 541166, overlap 541164 GCGTATTAAAAAAGA GCTCCCGG GATT CCGGGAGC TTATTTCACAATATA TERM 567 541166 - 541185 + T 100 -15 -3.93256 | opp_overlap 541164 541166 GCGTATTAAAAAAGA GCTCCCGG GATT CCGGGAGC TTATTTCACAATATA TRQ2_0541 542301 - 541186 - | ROK family protein TRQ2_0542 543526 - 542306 - | glycosyl transferase group 1 TERM 568 543412 - 543448 + g 89 -4.5 -5.74122 | overlap 543414 AGGCAGTCGCATTGA CGTGAAGAACCTTTT TTCCTTT AAGAGGTTCTGCAAG TTTTTTTATCTCGTC TERM 569 544431 - 544445 + H 87 -8.6 -4.47786 | overlap 544433 CACTTCCTTTTCTCC CTCAAG TTC CTTGAG TTTGTTTCAATAGTT TERM 570 544646 - 544677 + H 72 -7.4 -4.08939 | opp_overlap 544646 544647, overlap 544647 544676 ATGAATATCGGGAAA TGTTTCAATACTTC CTTA GAGGTATGGAAACG TTTCTGTGAATGTTA TERM 571 545023 - 545005 - H 83 -11 -3.67792 | opp_overlap 544998 544993 545009 TTAGAGGTATGGAAA CACAGGAC CAG GCCCTGTG TAACCACCTTCCTGT TERM 572 545139 - 545108 - H 75 -8.8 -3.85724 | AAAAATGAACGGAAA CGTTTCAATACTTC CTTA GAGGTATGGAAACG AGATCCAACAAAATA TERM 573 545237 - 545265 + H 100 -9.6 -5.4756 | opp_overlap 545243, overlap 545243 ATGAGAGAACCATTT CACGAAGCAGGG GAAAA CCCTGCTTTTTG TTTTTTGTTAAAATT TERM 574 545243 - 545259 + H 100 -9.4 -5.84011 | opp_overlap 545243, overlap 545237 GAACCATTTCACGAA GCAGGG GAAAA CCCTGC TTTTTGTTTTTTGTT TERM 575 545259 - 545243 - H 72 -9.4 -3.17688 | opp_overlap 545243 545237 GAACCATTTCACGAA GCAGGG GAAAA CCCTGC TTTTTGTTTTTTGTT TERM 576 545427 - 545413 - g 76 -8.6 -4.07618 | TGGGCAAGAAGGAAA GAGATC GTC GATCTC ATAAATGTTTCACAC TRQ2_0543 545314 - 546279 + | glycerol-3-phosphate dehydrogenase (NAD(P)(+)) TERM 577 546490 - 546475 - g 89 -4 -5.71712 | TTGGAGACAAAAAAA TTCTCG TTGT CAAGAA GACCGAGAAAGAAAT TRQ2_0544 546387 - 547718 + | FAD-dependent pyridine nucleotide-disulphide oxidoreductase TRQ2_0545 547743 - 548078 + | alkylhydroperoxidase TERM 578 548110 - 548076 - f 100 -18 -4.08692 | opp_overlap 548084, overlap 548084 GAATTCCTCGGAAAA TGAAATAACCCCTCCC TTT GGGAGGGGTTTTCTCA GGAGGGAAAGAGGAT TERM 579 548102 - 548084 - f 100 -16 -4.21465 | opp_overlap 548084, overlap 548076 CGGAAAATGAAATAA CCCCTCCC TTT GGGAGGGG TTTTCTCAGGAGGGA TERM 580 548084 - 548102 + F 100 -16 -4.36914 | opp_overlap 548084 548076 CGGAAAATGAAATAA CCCCTCCC TTT GGGAGGGG TTTTCTCAGGAGGGA TRQ2_0546 548124 - 549473 + | dihydrolipoamide dehydrogenase TRQ2_0547 550112 - 549450 - | HhH-GPD family protein TERM 581 549521 - 549533 + g 78 -4.9 -5.09173 | CACCGCACTTCGGAG TTTTG TTG CAAAA TTTTTTCGCGTGTTC TERM 582 549749 - 549723 - G 73 -10.9 -2.67747 | opp_overlap 549723, overlap 549722 GGCGTAGAGCAGAAT GGCATCGGC GGTTTCTTT GCCGATGCC TTTTATTTTGAGGAG TERM 583 549723 - 549749 + g 100 -12.3 -5.07652 | opp_overlap 549723 549722 GGCGTAGAGCAGAAT GGCATCGGCGG TTTCT TTGCCGATGCC TTTTATTTTGAGGAG TRQ2_0548 550140 - 550640 + | nitroreductase TERM 584 550726 - 550711 - f 80 -7.6 -4.57304 | ATGTAACTAAACAAA CCACAA TATA TTGTGG TAAAATCTTAACAGA TRQ2_0549 550766 - 551317 + | anaerobic ribonucleoside-triphosphate reductase activating protein TRQ2_0550 551283 - 553238 + | anaerobic ribonucleoside-triphosphate reductase TERM 585 553243 - 553261 + F 100 -13.1 -5.31275 | TCAGAAGGTGATCAG CCCCCGC ACAAC GCGGGGG TTTTTTGTGGTACAA TRQ2_0551 553320 - 554285 + | nitroreductase TRQ2_0552 555292 - 554282 - | ABC-2 type transporter TRQ2_0553 556370 - 555285 - | ABC-2 type transporter TRQ2_0554 557284 - 556367 - | ABC transporter related TERM 586 557305 - 557289 - H 100 -7.2 -5.65927 | opp_overlap 557284 557289 557291 CATTGAAACAAAAAA GCGCCC CTCAC GGGCAC TTTTGTTTAAAGGAT TERM 587 557289 - 557305 + H 75 -5 -4.87133 | opp_overlap 557289, overlap 557284 557291 CATTGAAACAAAAAA GCGCCC CTCAC GGGCAC TTTTGTTTAAAGGAT TERM 588 558352 - 558304 - H 76 -2.6 -5.31855 | gap 2, opp_overlap 558339, overlap 558307 558338 558341 GATCAAGAAGAAAAA GAA-GGGTTTCCATACCTCTA-AG GAA CTATTGAAACAGGGAAACCCGTTC ATCGAATTCCCTCTG TERM 589 558348 - 558307 - H 71 -4.5 -4.72127 | gap 1, opp_overlap 558339, overlap 558304 558338 558341 CAAGAAGAAAAAGAA GGGTTTCCATACCTCTA-AG GAA CTATTGAAACAGGGAAACCC GTTCATCGAATTCCC TRQ2_0555 559633 - 560358 + | hypothetical protein TRQ2_0556 560437 - 561024 + | propanediol utilization protein TERM 590 561053 - 561036 - T 100 -12.7 -5.86609 | opp_overlap 561036 CTAAAAAAATAAAAA GGGGAGC GTTC GCTCCCC TTACTCTTGAACTTC TERM 591 561036 - 561053 + T 90 -12.7 -3.37959 | opp_overlap 561036 CTAAAAAAATAAAAA GGGGAGC GTTC GCTCCCC TTACTCTTGAACTTC TRQ2_0557 561497 - 561054 - | heat shock protein Hsp20 TRQ2_0558 563303 - 561513 - | chaperone protein DnaK TERM 592 565621 - 565606 - g 75 -6.2 -4.39998 | opp_overlap 565605 565602 GATTCAGATAAGAAA TTCCTT TGAA AAGGAA GTCCTTCATGTGAAA TERM 593 566320 - 566306 - g 78 -5.6 -4.88711 | ATAAGACAGGAAAAA GGTCTC TTA GAGGCC ACACTTGAAGGTGCT TRQ2_0559 563537 - 566539 + | acriflavin resistance protein TERM 594 566566 - 566528 - T 73 -4.6 -4.81212 | opp_overlap 566535 566537, overlap 566537 566541 GCGATCAGAAGAAAA GTCAGAGTATAGATGAGA GCT TCTCAACTATCTTCTCAC AGCTTTCTGGATCGC TRQ2_0560 566987 - 566529 - | arginine repressor, ArgR TRQ2_0561 567159 - 567887 + | putative circadian clock protein, KaiC TRQ2_0562 567884 - 568327 + | hypothetical protein TERM 595 568328 - 568348 + T 87 -10.4 -4.36914 | ATTCAGAAACTGTGA GGCGGGGA ATCAA TCCCCGTC TTTTGTGAACAGAAG TRQ2_0563 569446 - 568337 - | major facilitator transporter TERM 596 569558 - 569536 - R 100 -14.2 -3.3858 | opp_overlap 569540, overlap 569540 AAATGAAGTGTAGAA GAAACCCGCC TGA AGCGGGTTTC TAATGAATTTGAAGA TERM 597 569540 - 569554 + r 76 -8.5 -4.00476 | opp_overlap 569536 569540 GAAGTGTAGAAGAAA CCCGC CTGAA GCGGG TTTCTAATGAATTTG TERM 598 569554 - 569540 - R 85 -9.2 -4.33248 | opp_overlap 569540, overlap 569536 GAAGTGTAGAAGAAA CCCGCC TGA AGCGGG TTTCTAATGAATTTG TRQ2_0564 571568 - 569586 - | methyl-accepting chemotaxis sensory transducer with Cache sensor TERM 599 569991 - 570008 + g 72 -2.7 -5.02606 | TTTTTCCGTCGCACT CTTGC TCTCTTCT GCAAG TTTTCTTATTTCATC TERM 600 571420 - 571440 + g 86 -14.1 -3.2918 | AGTGCATCGGCGCTT CCTTCTGAC TGG GTCAGAAGG TTCATATCAGTGTGT TRQ2_0565 572293 - 571616 - | hypothetical protein TRQ2_0566 572906 - 572265 - | endonuclease III TERM 601 572635 - 572672 + gr 90 -9.1 -4.71061 | overlap 572636 CTTCCGCCGTACCTT TCCACGAGGATCCTGGA TATC TCCACGATTCTCGCGGC TTTTTGCCTGTACAT TERM 602 572636 - 572671 + gr 90 -12.6 -3.41913 | overlap 572635 TTCCGCCGTACCTTT CCACGAGGATCCTGGA TATC TCCACGATTCTCGCGG CTTTTTGCCTGTACA TERM 603 572779 - 572759 - GR 71 -8.3 -3.53012 | opp_overlap 572758 572754 572759, overlap 572768 GCGGTGTTCTGTAAA CTTCGAAGA GCT TCTTCGACG CTTTCTCTGTGTTCT TRQ2_0567 574271 - 572916 - | peptidase M18 aminopeptidase I TRQ2_0568 575596 - 574271 - | alpha amylase catalytic region TERM 604 574428 - 574412 - G 73 -4.3 -4.82901 | overlap 574413 CTCTTTGCACAAAAA TTCGAGC TTT GCCCGAT CGATCCACTGGTTTT TERM 605 574548 - 574530 - G 79 -8.8 -4.12475 | opp_overlap 574489, overlap 574488 GAGACACCAGAGAAA GGCCCG TTGTACG CGGGCC ACTTCCAGAAGGTCT TERM 606 575074 - 575087 + g 70 -2.3 -5.01811 | CTCCCATATCAAGAA GGTGG AGAA CCAGC TTTTTCATTTCATCG TERM 607 575477 - 575464 - G 77 -3.7 -5.17353 | ATATGGAGGAAAAAA CAGGC ATGA GCCAG ACAAAGTCAATCCCC TRQ2_0569 577242 - 575593 - | fibronectin-binding A domain-containing protein TERM 608 576452 - 576462 + g 80 -6.8 -4.60041 | ACAAATTCGTTGATA CCCT CGG AGGG TTTTTCAAAGTACCT TERM 609 576558 - 576571 + g 83 -4.5 -5.39721 | AAACAAACACCCCCG GGAGT TCCA GCTCC TTTTTTATCTCCTCA TERM 610 576800 - 576814 + g 73 -4.2 -4.87291 | opp_overlap 576790, overlap 576790 576793 ACGAACTCCCTTCCG GGGAGG ATT TCTCTC TTTTTCGTTACAATG TERM 611 577037 - 577065 + g 84 -8.3 -4.58663 | gap 1, opp_overlap 577027 577040 577043 AGAAGCATCGTGAAC GAAGAGGGCATC TTCTCC GATGCC-TCTTC TTTTTCAGCGATCGT TERM 612 577162 - 577145 - G 72 -5.6 -4.37507 | opp_overlap 577145 577146 AAAAGAAAATAATAA TCAACC GTTGTT GGTTGA TAGATCTGCCTCAAG TRQ2_0570 578107 - 577244 - | apurinic endonuclease Apn1 TRQ2_0571 578163 - 578486 + | hypothetical protein TRQ2_0572 578833 - 578483 - | MazG nucleotide pyrophosphohydrolase TERM 613 578845 - 578871 + r 74 -7.3 -4.29738 | gap 1, overlap 578846 CCATCCCTTGACCTC CTCCCAATCCCC TGAA GGGGA-TGGGAC TTTTGGTGGCTCTCA TERM 614 578846 - 578870 + r 78 -10.8 -3.17361 | gap 1, overlap 578845 CATCCCTTGACCTCC TCCCAATCCCC TGAA GGGGA-TGGGA CTTTTGGTGGCTCTC TRQ2_0573 580092 - 578884 - | IS605 family transposase OrfB TERM 615 579355 - 579371 + g 80 -6.5 -4.88918 | overlap 579351 GTTGATCTGGTTTCT GAGCCGT CTC AGGGCTC TTTTCTTTGCACTAA TRQ2_0574 580466 - 580077 - | transposase IS200-family protein TERM 616 580540 - 580517 - H 90 -11 -4.39277 | opp_overlap 580513 580505 580505, overlap 580518 TAACACCACAACAAA CCTATCCCCC TGAA GGGGGATAGT AAGTGGTTGGGGTTC TERM 617 580539 - 580518 - H 95 -14.5 -3.22482 | opp_overlap 580513 580505 580505, overlap 580517 AACACCACAACAAAC CTATCCCCC TGAA GGGGGATAG TAAGTGGTTGGGGTT TRQ2_0575 580701 - 581771 + | glycosyl transferase group 1 TERM 618 581769 - 581787 + T 100 -11 -5.00616 | opp_overlap 581758 581769 AAGACCATCACCAAA TGAGGGGG TAG CCTCCTCA TTTTTTCACCAGCAC TERM 619 581787 - 581769 - T 75 -8.8 -3.81689 | opp_overlap 581769, overlap 581758 AAGACCATCACCAAA TGAGGGGG TAG CCTCCTCA TTTTTTCACCAGCAC TRQ2_0576 582693 - 581785 - | diacylglycerol kinase catalytic region TERM 620 581853 - 581835 - G 73 -2.4 -5.10933 | TTATTGAAAAGAAAA TCTTCTTG GCC CAGAAAGA TTCACCATCGAATTC TERM 621 582631 - 582641 + g 74 -5.4 -4.62302 | CAGAAGATCTTCGAC TCTG TCC CAGA TTTTTCCAGCTCTTC TRQ2_0577 582902 - 582696 - | hypothetical protein TERM 622 582939 - 582957 + r 93 -11.7 -4.13037 | opp_overlap 582939 ATTCTACCAAAAAAA GGGCAGG AAATC CCTGCCC TTCTTTAGTGTTTCT TERM 623 582957 - 582939 - R 100 -12.4 -5.52986 | opp_overlap 582939 ATTCTACCAAAAAAA GGGCAGGA AAT CCCTGCCC TTCTTTAGTGTTTCT TRQ2_0578 584192 - 582984 - | iron-containing alcohol dehydrogenase TERM 624 583891 - 583907 + g 86 -4.4 -5.626 | overlap 583885 CCTATCACGGCTTGA GCGTTT ATTTC AAGCGC TTTTTTTGTAGCCTC TRQ2_0579 585479 - 584274 - | threonine dehydratase TERM 625 584700 - 584690 - G 74 -5.4 -4.56133 | opp_overlap 584693 GCTCAAGAAGGAAAA GGAT GGC ATCC GCTATTTCTTCTTCG TERM 626 585571 - 585585 + H 74 -4.2 -5.00616 | overlap 585570 TTTCTCATTTTGCTT GTGAGA AAT TCACAC TTTTTTCACAAAGAA TERM 627 586463 - 586441 - g 76 -4 -4.9138 | overlap 586442 AGTACTGAAAGAAAA GGTTGACCTC AAC GAGAACATCC TCAAAGATTACCAGG TRQ2_0580 585647 - 586633 + | outer membrane protein-like protein TERM 628 587237 - 587225 - g 73 -4.1 -4.73614 | opp_overlap 587227, overlap 587227 GACGACGAAAAGAAA GCTCT GGA AAAGC AGATACTCTCCACTG TERM 629 587345 - 587331 - g 70 -5 -4.47328 | AAGTGTATCAGAAAA CAAGAA AGT TTCTCG AGGGGGTCACTCTGC TRQ2_0581 586649 - 587911 + | outer membrane protein-like protein TERM 630 588804 - 588820 + G 70 -5.1 -4.51174 | overlap 588805 AGAAATCAAAAAGGG TGTTTCC GAA GGAGACG TTTTGCTTCTCATCC TRQ2_0582 587908 - 588915 + | RND family efflux transporter MFP subunit TRQ2_0583 588912 - 589616 + | ABC transporter related TRQ2_0584 589603 - 590817 + | hypothetical protein TERM 631 590875 - 590845 - T 77 -3.3 -5.19879 | gap 1, opp_overlap 590853, overlap 590851 590852 GCGGAAACACAAAAA CAAACATTTGCCCC GAAA GGGGC-ATTTTTTG TTTTGTATCAGATTT TERM 632 590853 - 590868 + T 100 -10.4 -5.8901 | opp_overlap 590852 590851 590845 ACAAAAACAAACATT TGCCCC GAAA GGGGCA TTTTTTGTTTTGTAT TRQ2_0586 592968 - 592534 - | 3-dehydroquinate dehydratase, type II TRQ2_0587 594443 - 592965 - | shikimate kinase., 3-dehydroquinate synthase TRQ2_0588 595521 - 594391 - | chorismate synthase TERM 633 594928 - 594942 + gr 70 -7.1 -3.93256 | overlap 594918 594924 CTTCACCTTGCCGCC GAGGG TGTTT CCCTC TTCTTTCGCCCTGTC TERM 634 595272 - 595284 + gr 70 -4.7 -4.41348 | overlap 595273 TTCGAACGTCTTTCA CCGGG TTG CCCGC TTTGTTTGGAACGAG TRQ2_0589 596279 - 595518 - | shikimate dehydrogenase substrate binding subunit TRQ2_0590 597541 - 596276 - | 3-phosphoshikimate 1-carboxyvinyltransferase TRQ2_0591 598299 - 597538 - | prephenate dehydrogenase TRQ2_0592 599312 - 598296 - | phospho-2-dehydro-3-deoxyheptonate aldolase TERM 635 599372 - 599352 - R 100 -14 -5.7946 | opp_overlap 599347 599345 599352 TTGGTAATAAAAAAA GGGCTCCG CTGCC CGGAGCCC TTCAGTGTTTTCTAT TERM 636 599352 - 599372 + r 100 -14 -3.31575 | opp_overlap 599352, overlap 599347 599345 TTGGTAATAAAAAAA GGGCTCCG CTGCC CGGAGCCC TTCAGTGTTTTCTAT TERM 637 599451 - 599409 - R 100 -20.7 -3.74077 | gap 1, opp_overlap 599409 GGGCAGATACCGAAA GAGGCACCTGCCCG-GAGCG GTAG CACTCACGGACAGGTGCCCC TGTTAAACCAAAAGT TERM 638 599409 - 599451 + r 89 -14.1 -3.01791 | gap 1, opp_overlap 599409 GGGCAGATACCGAAA GAGGCACCTGCCCG-GAGCG GTAG CACTCACGGACAGGTGCCCC TGTTAAACCAAAAGT TRQ2_0593 600810 - 599569 - | major facilitator transporter TERM 639 599704 - 599716 + g 76 -9.1 -3.72893 | opp_overlap 599694 GAGAACCGATCCGAG CGGAG TGA CTCCG TTTGCTACGAGAATG TRQ2_0594 601506 - 601006 - | hypothetical protein TERM 640 601123 - 601133 + g 74 -6.8 -4.25566 | CGCGATATCACCTTC CACC ACC GGTG TTTTCCCTGATTCTT TRQ2_0595 601882 - 601499 - | uncharacterized protein-like protein TERM 641 602080 - 602066 - H 73 -4.3 -4.84527 | CTTACACATGAAAAA TGAGA GTAAT TCTCA AAAAGGAGGTGAGGA TERM 642 602207 - 602221 + H 100 -11.4 -6.09196 | opp_overlap 602206 CTGTTTTTTAACCAG GCCTCG AAA CGAGGC TTTTTTTGTTTTAAA TERM 643 602452 - 602440 - g 79 -4.1 -5.1523 | TGGAGAACAGAAAAA GACAT CAC ACGTC TTGGAAGGCCTCGTC TRQ2_0596 602254 - 603957 + | radical SAM domain-containing protein TERM 644 605125 - 605112 - g 70 -5.3 -4.51174 | TCAGGAGAAGGAAAA TCAAC GCCG GTTGA ATACATGAAGAAAGG TRQ2_0597 603954 - 605192 + | dipeptidyl aminopeptidase/acylaminoacyl-peptidase-like protein TERM 645 605389 - 605372 - gf 100 -12.7 -3.79113 | opp_overlap 605372 AGCTCCTTAGAAGAA GCCTCCC TTGT GGGAGGC TTTTTTAAAGTGGTG TERM 646 605372 - 605389 + GF 100 -12.7 -5.06451 | opp_overlap 605372 AGCTCCTTAGAAGAA GCCTCCC TTGT GGGAGGC TTTTTTAAAGTGGTG TRQ2_0598 605219 - 606349 + | dihydroorotase TRQ2_0599 606324 - 606965 + | 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductase-like protein TRQ2_0600 606953 - 607765 + | dihydroorotate dehydrogenase family protein TRQ2_0601 607762 - 608367 + | orotidine 5'-phosphate decarboxylase TRQ2_0602 608364 - 608927 + | orotate phosphoribosyltransferase TERM 647 609541 - 609527 - gf 72 -6.4 -4.26079 | overlap 609528 CCAAAGGATCTAAAA CCCGAA CAC TTCGGA GATCTCAACAAGAGA TRQ2_0603 608924 - 610228 + | amidohydrolase 3 TERM 648 610257 - 610213 - g 72 -3 -4.9218 | gap 1, overlap 610214 610215 610217 GATTTATGAGAAAAA CGGATCCTCTCATTGATATTT TCAA AAAGAACAAAGAGAGAATC-G ATATCCTTGGAAAAG TERM 649 610257 - 610283 + G 70 -2.4 -5.07652 | gap 1 AACAAAGAGAGAATC GATATCCT-TG GAAAAG CATGGGATATC TTTTATTTTGAAGGA TRQ2_0604 610203 - 610877 + | hypothetical protein TRQ2_0605 611794 - 610868 - | DNA methylase N-4/N-6 domain-containing protein TERM 650 610988 - 610968 - G 72 -4.7 -4.65916 | TCTATTCCAACAAAA TGCCGTC CTGTTTT AACGGCA GCCACACAAGTTGTT TRQ2_0606 612927 - 611944 - | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding TRQ2_0607 613787 - 612945 - | RpiR family transcriptional regulator TRQ2_0608 614555 - 613800 - | short-chain dehydrogenase/reductase SDR TRQ2_0609 615854 - 614571 - | TRAP dicarboxylate transporter, DctM subunit TRQ2_0610 616335 - 615856 - | tripartite ATP-independent periplasmic transporter DctQ TERM 651 616388 - 616366 - R 100 -14.1 -3.76775 | opp_overlap 616365 616364 CTGAACAGAGTGAAA GCCCGACCC AGAAA GGGCCGGGC AATTGATGATTACTC TRQ2_0611 617408 - 616398 - | TRAP dicarboxylate transporter, DctP subunit TERM 652 618078 - 618042 - g 76 -5.1 -4.78752 | opp_overlap 618071, overlap 618044 ATTACAACGGAAAAA TACTGGCCCTCAC ACCCGCTCACA GTGAGGGCCTGAA GGATCAGGTCTTTAG TERM 653 618076 - 618044 - g 71 -7.7 -4.00465 | opp_overlap 618071, overlap 618042 TACAACGGAAAAATA CTGGCCCTCAC ACCCGCTCACA GTGAGGGCCTG AAGGATCAGGTCTTT TRQ2_0612 617561 - 618145 + | hypothetical protein TRQ2_0613 618333 - 618130 - | heavy metal transport/detoxification protein TRQ2_0614 620541 - 618361 - | heavy metal translocating P-type ATPase TERM 654 618491 - 618504 + gr 73 -5.3 -4.67635 | TTGTAGAAGAAGGCC CAGAA CAGG TTCTG TTTTATGATTTTGAA TERM 655 618697 - 618726 + gr 70 -7.1 -3.8709 | overlap 618696 CGCAACTTTCTTTCC CTGGGCCTGGTAA TATC TCACAAGGTCCAG TTTCTCAGAAGGTTT TRQ2_0615 620824 - 620498 - | alkylhydroperoxidase TERM 656 620661 - 620674 + gr 72 -8.1 -3.76413 | opp_overlap 620660 620658 620661 GCTTTCTGATAATAT CCCTG AGCA CAGGG TTTGCACTTTTCCAC TRQ2_0616 621074 - 620817 - | membrane protein-like protein TRQ2_0617 621169 - 621342 + | YHS domain-containing protein TERM 657 621342 - 621367 + T 85 -11.9 -3.35639 | opp_overlap 621347, overlap 621347 CGGTTGTTGTCATTG AAAAAGGCGCC GTCC GGCGCCTTTTA TTCATTCAGGATCTT TERM 658 621347 - 621362 + T 100 -11.8 -4.78572 | opp_overlap 621347, overlap 621342 GTTGTCATTGAAAAA GGCGCC GTCC GGCGCC TTTTATTCATTCAGG TERM 659 621362 - 621347 - T 100 -11.8 -4.65895 | opp_overlap 621347 621342 GTTGTCATTGAAAAA GGCGCC GTCC GGCGCC TTTTATTCATTCAGG TRQ2_0618 622324 - 621365 - | aldo/keto reductase TRQ2_0619 623315 - 622338 - | oxidoreductase domain-containing protein TERM 660 622996 - 623021 + g 84 -8.3 -4.58395 | TCGACAACTTTCTTT CCCGTTTCTAC GTCC GTTGAAATGGG TTTTTCACAGATCAC TRQ2_0620 623863 - 623375 - | hypothetical protein TERM 661 623933 - 623918 - R 100 -11.8 -5.58179 | CACCAGAACAAAAAA GGGCGG AAAT CCGCCC TTGAACACACTACTG TRQ2_0621 625979 - 623961 - | Beta-galactosidase TERM 662 624323 - 624334 + g 74 -3.6 -5.00895 | ATCTTCCGAGCACTT CCGC TGTG GTGG TTTTTATGTAGTCAA TERM 663 625999 - 626018 + r 88 -10.6 -4.20211 | opp_overlap 626000, overlap 625992 626000 GTTCACCTCCAAAAA ACCCCGGC GATC GCCGGGGC TTTCTCATTTCTGTT TERM 664 626000 - 626017 + r 89 -14.1 -3.105 | opp_overlap 626000, overlap 625999 625992 TTCACCTCCAAAAAA CCCCGGC GATC GCCGGGG CTTTCTCATTTCTGT TERM 665 626017 - 626000 - R 100 -14.1 -5.03314 | opp_overlap 625999 625992 626000 TTCACCTCCAAAAAA CCCCGGC GATC GCCGGGG CTTTCTCATTTCTGT TRQ2_0622 627999 - 626023 - | extracellular solute-binding protein TERM 666 626087 - 626077 - G 72 -8.2 -3.68569 | opp_overlap 626069 CCATGGACTGAAGAA CGGC GTT GCCG TCACCAGTTCCTCCG TERM 667 627018 - 627008 - G 72 -8.2 -3.67402 | overlap 627006 627009 AGAAGCGGCAAAACA CCCG GGC CGGG TCCCAGAAGACCAAT TERM 668 628129 - 628142 + H 73 -5.3 -4.63184 | opp_overlap 628129 628140 AATTATTCACAACTA TCGAT AAAT ATCGA TTTTTACCGTCAATT TERM 669 629425 - 629408 - g 85 -7 -5.0133 | TATTTCCTGAAAAAA CCAGAC GGAGAT GTCTGG CAGACGGACGACTGG TRQ2_0623 628319 - 630613 + | glycoside hydrolase family protein TERM 670 630637 - 630606 - T 100 -16 -3.3879 | opp_overlap 630611, overlap 630611 AAGCGATTTTAAAGA CAAAATGAGGGCGC TTCT GCGCCCTCATTTCA TAAGCACAAAATCGA TERM 671 630632 - 630611 - T 100 -15.9 -4.79451 | opp_overlap 630611, overlap 630606 ATTTTAAAGACAAAA TGAGGGCGC TTCT GCGCCCTCA TTTCATAAGCACAAA TERM 672 630611 - 630632 + T 100 -15.9 -3.72576 | opp_overlap 630611 630606 ATTTTAAAGACAAAA TGAGGGCGC TTCT GCGCCCTCA TTTCATAAGCACAAA TRQ2_0624 632051 - 630630 - | L-fucose isomerase 1 domain-containing protein TERM 673 631570 - 631583 + g 76 -2.3 -5.43414 | CCGAACACACCGTAT CTCTG ACCC CTGAG TTTTTTGTATGTGCT TRQ2_0625 633388 - 632048 - | Alpha-L-fucosidase TRQ2_0626 635517 - 633394 - | glycosyl hydrolase BNR repeat-containing glycosyl hydrolase TERM 674 633994 - 634013 + g 74 -5.6 -4.7078 | AATTACCTCATGATT CGCTGGAC TCCA GACCAGTG TTTTTCCATCGTTCG TERM 675 634309 - 634325 + g 72 -6.6 -4.31433 | opp_overlap 634311, overlap 634305 TCCTATGGGGGGAAC CAGTTG CAAAA CAACTG TTTCTTCTAACCCTC TRQ2_0627 636483 - 635533 - | oligopeptide/dipeptide ABC transporter, ATPase subunit TRQ2_0628 637472 - 636480 - | oligopeptide/dipeptide ABC transporter, ATPase subunit TRQ2_0629 638338 - 637469 - | binding-protein-dependent transport systems inner membrane component TRQ2_0630 639361 - 638357 - | binding-protein-dependent transport systems inner membrane component TERM 676 639420 - 639399 - R 100 -12.9 -3.57017 | opp_overlap 639397 639396, overlap 639397 639400 TAATCTCAAAGAAGA GCCCGCCCC GTCT GGGGCGGGG GAATGTTATTTCCTT TERM 677 639419 - 639400 - R 100 -16.4 -2.73487 | opp_overlap 639397 639396, overlap 639399 639397 AATCTCAAAGAAGAG CCCGCCCC GTCT GGGGCGGG GGAATGTTATTTCCT TRQ2_0631 641261 - 639426 - | extracellular solute-binding protein TERM 678 639728 - 639740 + g 73 -4.1 -4.79053 | ATACATGTCCTACAC CTTCT CCA AGAGG TTTATTTTGATATTT TERM 679 641221 - 641202 - G 78 -5.8 -4.74706 | gap 1 GGGAACATTCAAAAA TTGC-GCAA AAC TTGCTGCAA AAATGGTGAACAGCA TERM 680 641259 - 641249 - G 73 -4 -4.84359 | overlap 641255 GCACCGCCACAAAAA GAAA CCT TTTC ATAAAAACACCCCCT TRQ2_0632 641499 - 642533 + | LacI family transcription regulator TERM 681 642532 - 642514 - T 77 -2.4 -5.34365 | opp_overlap 642525, overlap 642525 TCAGAACAATAAAAA CACTAAAA GAT TTCTCGTG ACAAGAATGTTTTTC TRQ2_0633 643530 - 642577 - | alcohol dehydrogenase TERM 682 643151 - 643171 + g 77 -11.2 -3.28712 | TCTGCGGGTACATTT CTCACAGG ATAAA CCTGTGAG TTCTCCACGAGCACG TRQ2_0634 644316 - 643543 - | short-chain dehydrogenase/reductase SDR TERM 683 644219 - 644202 - G 74 -6.9 -4.30576 | overlap 644205 TGTCCATGATCAAAA CAGCTGC ACCC GCCGCTG CCAGCGCCTGGGCGA TERM 684 644533 - 644518 - g 72 -5.4 -4.55295 | gap 1, overlap 644519 644520 CTCTTCAGAAAGAAA GCGGGAG GTT CTCCC-C TGAACGTCGCCGTTG TRQ2_0635 644425 - 645372 + | ribokinase-like domain-containing protein TRQ2_0636 645471 - 646127 + | transaldolase TERM 685 646150 - 646129 - T 100 -11.5 -4.68209 | opp_overlap 646131, overlap 646131 ACCTGAAGAAATAAA GAGCCCGCC ACCC GGCGGGCTT TTTCATGAGCTACAT TERM 686 646148 - 646131 - T 100 -14.1 -3.94772 | opp_overlap 646131, overlap 646129 CTGAAGAAATAAAGA GCCCGCC ACCC GGCGGGC TTTTTCATGAGCTAC TERM 687 646131 - 646148 + T 100 -14.1 -4.7373 | opp_overlap 646131 646129 CTGAAGAAATAAAGA GCCCGCC ACCC GGCGGGC TTTTTCATGAGCTAC TRQ2_0637 647812 - 646160 - | phosphoenolpyruvate-protein phosphotransferase TRQ2_0638 648092 - 647832 - | phosphotransferase system, phosphocarrier protein HPr TRQ2_0639 649479 - 648109 - | PTS system, fructose subfamily, IIC subunit TRQ2_0640 649949 - 649497 - | putative PTS IIA-like nitrogen-regulatory protein PtsN TRQ2_0641 650884 - 649949 - | 1-phosphofructokinase TRQ2_0642 651651 - 650881 - | DeoR family transcriptional regulator TERM 688 652172 - 652155 - R 100 -14.1 -5.32882 | opp_overlap 652155 GATGAGGAGAAAAAA GCCCGCC ACCC GGCGGGC TTTTTTAAGCTACCC TERM 689 652155 - 652172 + r 100 -14.1 -5.0538 | opp_overlap 652155 GATGAGGAGAAAAAA GCCCGCC ACCC GGCGGGC TTTTTTAAGCTACCC TRQ2_0643 653232 - 652177 - | glutamate 5-kinase TERM 690 652687 - 652707 + g 100 -14.1 -4.33151 | TTTCAGTTTCACCGA CTCGTCGAA TCT TTCGACGAG TTTTCCGTTCTCATC TERM 691 652883 - 652865 - G 71 -9.6 -3.22653 | overlap 652863 ACGATGGGTACAACA TCGAACTC CGA GAGTCCGA TCAGTGTGTTTCTGA TERM 692 653094 - 653080 - G 95 -12.8 -4.08221 | TCCAAGATAAGTAAA GCCCGC AGC GCGGGC CCCAGATGTGATGAT TRQ2_0644 654482 - 653235 - | gamma-glutamyl phosphate reductase TRQ2_0645 654995 - 654495 - | 3-isopropylmalate dehydratase, small subunit TRQ2_0646 656265 - 655009 - | 3-isopropylmalate dehydratase TRQ2_0647 657361 - 656258 - | 2-methylcitrate synthase/citrate synthase II TERM 693 656581 - 656552 - G 82 -10.9 -3.57144 | opp_overlap 656554 TTTGCTATCTGGAAA GTGTTCCTGAAGA ACTC TCTTCAAAAACAC CGCTCTCGGATCGTA TERM 694 657234 - 657244 + g 74 -5.4 -4.58283 | AAGTAGGCCGTTTCT TCGA AAG TCGA TTTTTCCGCGAGTTC TERM 695 657482 - 657493 + H 71 -4.4 -4.67038 | GCATGGCACAGGCTG GCAT TTTA ATGC TTTTCGTTTTGAAAA TERM 696 658749 - 658737 - g 78 -6.3 -4.65263 | AGGCTGGAAAAGAAA GATCT CGA AGATC CCGAAACTCTCGAAA TRQ2_0648 657579 - 658838 + | 6-phosphofructokinase TERM 697 658871 - 658843 - T 70 -10.3 -2.53125 | opp_overlap 658847, overlap 658842 658841 AGCTTCCATAAAACT TTTATGAGCCCCA TCT TGGGGCTCATTAT CTTTCTACAACGAGA TERM 698 658847 - 658867 + T 100 -15.5 -3.89695 | opp_overlap 658843 658842 658841 TCCATAAAACTTTTA TGAGCCCCA TCT TGGGGCTCA TTATCTTTCTACAAC TRQ2_0649 660661 - 658868 - | ABC transporter transmembrane region TRQ2_0650 662387 - 660654 - | ABC transporter related TRQ2_0651 662836 - 662384 - | PadR-like family transcriptional regulator TERM 699 662576 - 662546 - G 70 -4.7 -4.45577 | opp_overlap 662537 662564, overlap 662537 ACAAATTTCAGAAAA GACTCTGAATCTC TCTGC GAAATCCAGTGCC TTCTTGATTTCCTCT TRQ2_0652 664115 - 662904 - | glycerol-1-phosphate dehydrogenase (NAD(P)(+)) TERM 700 663326 - 663338 + g 81 -4.8 -5.1356 | opp_overlap 663325 663326, overlap 663325 663320 TCAAGCCATGGAAAG GAGG CATCT CCTC TTTTTCTTCGTGAAA TERM 701 663978 - 663943 - G 95 -11.8 -4.19735 | opp_overlap 663945, overlap 663945 TCGTTGAAAACGAAA GACCGCTTCCCGGGCA AGTC CACCAGGGAAGCGGTG TTCAGGTCTGCTATG TERM 702 663976 - 663945 - G 100 -14.4 -3.695 | opp_overlap 663945, overlap 663943 GTTGAAAACGAAAGA CCGCTTCCCGGGCA AGTC CACCAGGGAAGCGG TGTTCAGGTCTGCTA TERM 703 663945 - 663976 + g 82 -13 -3.08438 | opp_overlap 663945 663943 GTTGAAAACGAAAGA CCGCTTCCCGGG CAAGTCCA CCAGGGAAGCGG TGTTCAGGTCTGCTA TRQ2_0653 665639 - 664119 - | carbohydrate kinase FGGY TRQ2_0654 666289 - 665651 - | class II aldolase/adducin family protein TRQ2_0655 667436 - 666366 - | aldose 1-epimerase TERM 704 667294 - 667271 - G 100 -16.8 -4.11081 | opp_overlap 667268 667267 AAACAACATCAGAAA GGGTGCCAGA ACTG TCTGGCACCC ACAATTCTCTCACTA TRQ2_0656 668919 - 667465 - | Alpha-N-arabinofuranosidase TRQ2_0657 671363 - 668934 - | hypothetical protein TRQ2_0658 673279 - 671375 - | Alpha-N-arabinofuranosidase TERM 705 671905 - 671895 - G 80 -6.8 -4.63486 | ACTCCTGTAAGAAAA GCTG CTT CAGC GAGTGCTGCCTGCCA TRQ2_0659 674150 - 673296 - | binding-protein-dependent transport systems inner membrane component TRQ2_0660 675096 - 674152 - | binding-protein-dependent transport systems inner membrane component TERM 706 675017 - 674989 - G 86 -4.6 -5.52807 | gap 1, overlap 674992 AAGAACAAAGAAAAA GAA-GTGGGGG AGCAGGAA CCCCCACGCTC CCAACTCCCTCTTCA TERM 707 675013 - 674992 - G 88 -8.7 -4.78345 | overlap 674989 AACAAAGAAAAAGAA GTGGGGG AGCAGGAA CCCCCAC GCTCCCAACTCCCTC TRQ2_0661 676365 - 675118 - | extracellular solute-binding protein TERM 708 675653 - 675663 + g 72 -5.4 -4.44355 | TCGATAGGTTGATCA GGAT ACA ATCC TTCTTTTTGAAGTTC TRQ2_0662 676617 - 678032 + | glycoside hydrolase family protein TRQ2_0663 678063 - 678815 + | hypothetical protein TRQ2_0664 678826 - 680256 + | glycoside hydrolase family protein TRQ2_0665 680273 - 681025 + | hypothetical protein TRQ2_0666 681041 - 681817 + | hypothetical protein TRQ2_0667 681823 - 682566 + | LamG domain-containing protein TERM 709 682592 - 682564 - T 93 -11.8 -3.79419 | opp_overlap 682569, overlap 682569 CTTTTCCAGAAAAGA TAAAAGAGCCCC TTCGT GGGGCTCTTTTT TATTTTTTCAACCAC TERM 710 682569 - 682587 + T 100 -11.7 -6.04324 | opp_overlap 682564 682569 CCAGAAAAGATAAAA GAGCCCC TTCGT GGGGCTC TTTTTTATTTTTTCA TERM 711 682587 - 682569 - T 100 -11.7 -4.94487 | opp_overlap 682569, overlap 682564 CCAGAAAAGATAAAA GAGCCCC TTCGT GGGGCTC TTTTTTATTTTTTCA TRQ2_0668 684454 - 682592 - | hypothetical protein TRQ2_0669 685508 - 684657 - | binding-protein-dependent transport systems inner membrane component TRQ2_0670 686392 - 685508 - | binding-protein-dependent transport systems inner membrane component TERM 712 686400 - 686416 + r 76 -10.8 -3.08283 | opp_overlap 686400, overlap 686393 TTTCTCATGGCAAAA GGGGGC AGAGC GCCCCC TCTTCACCTCCTTAT TERM 713 686416 - 686400 - R 91 -11.5 -4.13767 | opp_overlap 686400 686393 TTTCTCATGGCAAAA GGGGGCA GAG CGCCCCC TCTTCACCTCCTTAT TRQ2_0671 687738 - 686428 - | extracellular solute-binding protein TRQ2_0672 687931 - 689421 + | L-arabinose isomerase TERM 714 689423 - 689442 + T 100 -9.2 -5.47821 | opp_overlap 689424, overlap 689424 TTTTGAAAAGATGAA AGAGGGGC GAAA GCCCCTCA TTTTTTTGGATACGT TERM 715 689441 - 689424 - T 100 -12.7 -4.07678 | opp_overlap 689424 689423 TTTGAAAAGATGAAA GAGGGGC GAAA GCCCCTC ATTTTTTTGGATACG TERM 716 689424 - 689441 + T 100 -12.7 -3.87608 | opp_overlap 689424, overlap 689423 TTTGAAAAGATGAAA GAGGGGC GAAA GCCCCTC ATTTTTTTGGATACG TRQ2_0673 690495 - 689440 - | regulatory protein GntR HTH TERM 717 689468 - 689478 + g 72 -5.4 -4.54727 | TACGTCACCGACTCT CTCA TAA TGAG TTTTGGTTTGAAAAC TRQ2_0674 691724 - 690513 - | acetate kinase TERM 718 691364 - 691394 + g 72 -9 -3.58037 | TCGCAGGGTTGTGAA GCGGTGCAAGAGGT GAA ACCTCTTCGATCGC TTTGAGCACTTCCTC TRQ2_0675 692678 - 691737 - | fructose-1,6-bisphosphate aldolase, class II TERM 719 692693 - 692728 + r 76 -5.5 -4.76802 | gap 1, opp_overlap 692702, overlap 692697 692702 TTGTCACACCTCCTT CAATGTAAAGGCCGGG ACAAG CCCGGCCTTCA-ATTA TTTCTTGTTTTTGAG TERM 720 692697 - 692725 + r 84 -8.8 -4.44151 | opp_overlap 692702, overlap 692693 692702 CACACCTCCTTCAAT GTAAAGGCCGGG ACAAG CCCGGCCTTCAA TTATTTCTTGTTTTT TERM 721 692702 - 692720 + r 95 -13.1 -3.37303 | opp_overlap 692702, overlap 692697 692693 CTCCTTCAATGTAAA GGCCGGG ACAAG CCCGGCC TTCAATTATTTCTTG TERM 722 692720 - 692702 - R 100 -13.1 -3.75153 | opp_overlap 692702 692697 692693 CTCCTTCAATGTAAA GGCCGGG ACAAG CCCGGCC TTCAATTATTTCTTG TRQ2_0676 695371 - 692726 - | pyruvate, phosphate dikinase TERM 723 693062 - 693076 + g 72 -8.6 -3.67558 | opp_overlap 693062 GTCGTTGGTACCGAA GCTGAA GAA TTCAGC TTCTTCCGCTATCTG TERM 724 694850 - 694867 + g 78 -4.9 -4.99435 | gap 1 TTCTGCATCCAGTTC GGTGTCGA GCT TC-ACACC TTTTTCCTTCTTGAG TERM 725 695105 - 695120 + g 72 -3.2 -5.0538 | AACAAGGAGTGGATT GTTGGG GTCA CCGAAC TTTTTTCCAGTAACC TRQ2_0677 696678 - 695446 - | hypothetical protein TRQ2_0678 696743 - 697588 + | methylenetetrahydrofolate reductase TRQ2_0679 697575 - 698183 + | vitamin B12 dependent methionine synthase activation region TERM 726 698305 - 698290 - g 78 -6.1 -4.67608 | GAGCTGAATATAAAA GCACC CGATGT GGTGC TGAAAGTTCATAGAA TRQ2_0680 698167 - 700473 + | homocysteine S-methyltransferase TERM 727 701423 - 701412 - g 76 -4.4 -5.03405 | overlap 701399 AAGAGGACAGAAAAA TCCT CGAA AGGA TAAAGAACAAACGCT TRQ2_0681 700478 - 701830 + | tRNA modification GTPase TrmE TERM 728 701861 - 701828 - T 81 -9.8 -4.07568 | gap 2, opp_overlap 701822 701822 701833, overlap 701832 701835 TTCTGCGTTGGAAAA TGAATGAGGGGAAGGG TTTC CCCTTCCCCT-A-TCA CTTGACCTTCTCTTT TERM 729 701858 - 701832 - T 89 -11.7 -3.66908 | gap 1, opp_overlap 701822 701822 701833, overlap 701828 701835 GCGTTGGAAAATGAA TGAGGGGAAGGG TTTC CCCTTCCCCT-A TCACTTGACCTTCTC TERM 730 701833 - 701858 + T 84 -13.3 -2.55551 | opp_overlap 701832 701828 701835, overlap 701822 701822 CGTTGGAAAATGAAT GAGGGGAAGGG TTTC CCCTTCCCCTA TCACTTGACCTTCTC TERM 731 701856 - 701835 - T 100 -15.9 -2.94333 | opp_overlap 701833 701822 701822, overlap 701832 701828 TTGGAAAATGAATGA GGGGAAGGG TTTC CCCTTCCCC TATCACTTGACCTTC TRQ2_0682 702131 - 701859 - | histone family protein DNA-binding protein TRQ2_0683 703985 - 702312 - | excinuclease ABC, C subunit TERM 732 702413 - 702423 + gr 81 -3.2 -5.40464 | CCAGGGAACCAAAGT GTTC AAT GAGC TTTTTCTTTCTGATG TRQ2_0684 704664 - 703945 - | pseudouridine synthase TRQ2_0685 706541 - 704661 - | glucose inhibited division protein A TRQ2_0686 707652 - 706552 - | DNA polymerase III, beta subunit TRQ2_0687 708874 - 707666 - | phosphate transporter TERM 733 708280 - 708296 + g 70 -2.2 -5.00616 | opp_overlap 708280, overlap 708295 GAAGAGATTCACTAA GAGGCT GTTTG AGCGTC TTTTTTACAAAAAGA TRQ2_0688 709555 - 708887 - | hypothetical protein TRQ2_0689 710463 - 709552 - | D-alanine--D-alanine ligase TERM 734 709602 - 709618 + gr 74 -10.9 -2.50307 | opp_overlap 709582 709605, overlap 709583 709601 TTAAGATGATCTCAA CGAGTTC CTC GAACTCG ATTCCTCCCGCTTTC TRQ2_0690 712279 - 710378 - | DNA topoisomerase I TERM 735 711146 - 711135 - GR 72 -5.8 -4.46212 | opp_overlap 711135 711136 GTTCTCAGGACAAAA CGAG TTTC CTCG TATTGAGAAGGCTTC TRQ2_0691 713306 - 712272 - | metal dependent phosphohydrolase TRQ2_0692 713661 - 713269 - | hypothetical protein TERM 736 713600 - 713580 - GR 82 -6.9 -4.90477 | TATAAAAAAGGAAAA TTGTGAGGT CAA AGCTCACAA CCCATAGCAGAATCA TERM 737 713686 - 713668 - R 74 -8 -4.10188 | overlap 713669 TACAGCCATAAATAA TGCGGGCC AAC AGCCCGCT CACACCTCCGAAACT TERM 738 713685 - 713669 - R 79 -11.5 -3.0539 | overlap 713668 ACAGCCATAAATAAT GCGGGCC AAC AGCCCGC TCACACCTCCGAAAC TRQ2_0693 713898 - 713686 - | ribosomal protein L28 TRQ2_0694 714401 - 713949 - | SsrA-binding protein TRQ2_0695 714729 - 714403 - | hypothetical protein TRQ2_0696 715016 - 714726 - | glutamyl-tRNA(Gln) amidotransferase, C subunit TRQ2_0697 715230 - 714979 - | carbon storage regulator, CsrA TRQ2_0698 716248 - 715235 - | DNA protecting protein DprA TERM 739 715378 - 715388 + g 74 -5.4 -4.56153 | opp_overlap 715378 GCGAACTTCTCAACA GATC GTA GATC TTCTTTTTGTCATCA TRQ2_0699 716528 - 716235 - | Fe-S cluster domain-containing protein TRQ2_0700 717117 - 716542 - | electron transport complex, RnfABCDGE type, A subunit TERM 740 716868 - 716854 - G 84 -8.6 -4.56597 | GGTTTTCTTCAAAAA CAGTTC GAC GAACTG GACGAAAGAAGCGAT TRQ2_0701 717716 - 717114 - | electron transport complex, RnfABCDGE type, E subunit TRQ2_0702 718387 - 717713 - | electron transport complex, RnfABCDGE type, G subunit TRQ2_0703 719340 - 718384 - | electron transport complex, RnfABCDGE type, D subunit TRQ2_0704 720644 - 719337 - | electron transport complex, RnfABCDGE type, C subunit TRQ2_0705 721500 - 720649 - | radical SAM domain-containing protein TERM 741 720868 - 720886 + g 83 -9.6 -4.08064 | overlap 720852 720849 TTTCCTGTAACGCTC CAGGGAAG GTC TTTCCCTG TTTTCAAAGGCCGTT TRQ2_0706 721754 - 721497 - | hypothetical protein TRQ2_0707 722791 - 721766 - | hypothetical protein TERM 742 722275 - 722260 - G 76 -9 -3.79909 | TCAAAGGATCAAGAA CCGGAA ACAC TTCCGG CAGATTTCTCAAGTC TRQ2_0708 724066 - 722795 - | glucose-1-phosphate adenylyltransferase TERM 743 723440 - 723460 + g 87 -10.5 -4.1673 | GGAACTGTTTGGATC GTTCTCGTC TTC GATGAGAAC TTTCTTCAGGAATTC TRQ2_0709 725190 - 724078 - | glucose-1-phosphate adenylyltransferase, GlgD subunit TRQ2_0710 725772 - 725230 - | hypothetical protein TRQ2_0711 725840 - 727312 + | UDP-N-acetylmuramyl-tripeptide synthetase TRQ2_0712 727309 - 728589 + | UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase TRQ2_0713 728586 - 729494 + | phospho-N-acetylmuramoyl-pentapeptide-transferase TERM 744 730514 - 730502 - g 72 -2.7 -5.055 | GGAATCGGCAAAAAA GAAAA CTA TTCTC TCTTCGTGGAAAAAG TRQ2_0714 729491 - 730783 + | UDP-N-acetylmuramoylalanine--D-glutamate ligase TERM 745 730924 - 730937 + G 83 -4.5 -5.3671 | CATTTGATGAAGCTC GCGGT GGCC ATCGC TTTTTTCGTTGTCTT TRQ2_0715 730780 - 731874 + | cell cycle protein TERM 746 732781 - 732767 - g 80 -7.1 -4.57353 | overlap 732762 CGTTATCAGAGAAAA CGAGG CGTCT CCTCG GAAAATAATCGAGTC TRQ2_0716 731871 - 732890 + | UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase TERM 747 733297 - 733273 - g 72 -5 -4.6856 | gap 1, opp_overlap 733275, overlap 733275 GAAACATTTGAAAAA GTCTCCAACGG TGTT CC-TTGGAGGC ATAATGGATTCCCTC TRQ2_0717 732887 - 734260 + | UDP-N-acetylmuramate--alanine ligase TRQ2_0718 734688 - 734212 - | phosphodiesterase TRQ2_0719 735551 - 734694 - | auxin efflux carrier TERM 748 735580 - 735616 + r 79 -8 -4.37092 | opp_overlap 735573 735587, overlap 735587 GAGAGGAATTCTACC AGAAAAAGAGGGCGTC TCTTT GACGCCCTCTTTATGG TTTTCTAACACCAAT TERM 749 735609 - 735587 - R 100 -14.9 -4.91511 | opp_overlap 735580 735587 ATTCTACCAGAAAAA GAGGGCGTC TCTTT GACGCCCTC TTTATGGTTTTCTAA TERM 750 735587 - 735609 + r 100 -14.9 -4.2408 | opp_overlap 735587, overlap 735580 ATTCTACCAGAAAAA GAGGGCGTC TCTTT GACGCCCTC TTTATGGTTTTCTAA TRQ2_0720 737248 - 735611 - | NADH dehydrogenase (quinone) TERM 751 735985 - 735959 - G 73 -10.2 -2.95774 | overlap 735979 GAGATCCACCACACA GTGAGTCTCGTC AGC AACGAGAATCAC TCCTGATCCGAGAGA TRQ2_0721 737718 - 737245 - | NADH-quinone oxidoreductase, E subunit TERM 752 737805 - 737794 - R 77 -4.4 -5.08824 | GTGCCATTTAAAAAA GGTT TTTC AACC AGTCAAAAATAGGAA TRQ2_0722 738460 - 737786 - | hypothetical protein TRQ2_0723 739398 - 738460 - | D-cysteine desulfhydrase family protein TERM 753 739776 - 739790 + G 72 -5 -4.59773 | GAAAGCTCGCAGGAG TTCTCT CAG AGGGAA TTTTTGAAGGTGCAA TERM 754 740038 - 740010 - g 71 -6.8 -4.12188 | opp_overlap 740009 740012, overlap 740014 740030 740031 740033 CGAGGATCTGGAAAA GATACCTTCTTC AGAAA GAAGGAGATATC ATATCTCTGGAAGGA TRQ2_0724 739451 - 740146 + | biotin--acetyl-CoA-carboxylase ligase TRQ2_0725 740348 - 740115 - | RNA-binding S4 domain-containing protein TERM 755 740171 - 740185 + g 73 -4.2 -4.80178 | AGCCTCCGTTTCCCA CAACCC TTA GGGTTA TTTTCTTGGTTGGTA TRQ2_0726 741133 - 740345 - | ABC transporter related TERM 756 741288 - 741273 - g 73 -7.6 -4.05788 | CCTCGGGAAAGGAAA TTCCTC GTGG GAGGAA TAGGGATTGCCCTTG TERM 757 741775 - 741756 - g 71 -10 -3.28924 | GAGCCCGGTGCAGAA CTCACCCG CGAA CAGGTGAG AGGAATCGTTGAGCT TERM 758 741977 - 741956 - g 71 -3.7 -4.82998 | opp_overlap 741961, overlap 741961 CGAAAGCAAAATAAA GAAAGCACT GGAA AGTGTCTTC GGTCCTGGAAGGGTG TRQ2_0727 741195 - 742793 + | flagellar M-ring protein FliF TRQ2_0728 742798 - 743805 + | flagellar motor switch protein FliG TERM 759 744917 - 744892 - g 70 -2.5 -4.93661 | overlap 744895 AGACGAAGAATAAAA GATCCTCTACC AGTG GGCATACGATC GATAGATGGCTTCAT TERM 760 745590 - 745573 - g 81 -12.7 -3.1991 | opp_overlap 745579, overlap 745571 745569 ACCGAAGAACACAGA GAGGCGG CGAA CCGCCTC CGATCGCTGATGTCG TRQ2_0730 744478 - 745794 + | flagellar protein export ATPase FliI TRQ2_0731 747789 - 745771 - | glycyl-tRNA synthetase, beta subunit TERM 761 747130 - 747141 + g 89 -4.4 -5.71712 | opp_overlap 747122 747119 AAATTCATCGATCTG TTCG AGGA CGAA TTTTTTTCTCTCCAG TERM 762 747357 - 747369 + g 70 -4.8 -4.42788 | CGTGTTCACCGGAAC CCCA CCTCA TGGG TTTTCTAAAATTCAA TRQ2_0732 748630 - 747770 - | glycyl-tRNA synthetase, alpha subunit TRQ2_0733 749020 - 748634 - | endoribonuclease L-PSP TRQ2_0734 750446 - 749022 - | glycine dehydrogenase (decarboxylating) TRQ2_0735 751756 - 750443 - | glycine dehydrogenase (decarboxylating) TRQ2_0736 752153 - 751785 - | glycine cleavage system H protein TRQ2_0737 753250 - 752156 - | glycine cleavage system T protein TRQ2_0738 753456 - 753247 - | hypothetical protein TERM 763 753509 - 753548 + H 70 -6.6 -4.10657 | gap 1, opp_overlap 753509, overlap 753518 TAACATCACGAAGAA GTGGTAAATTG-ACATAGG GAA CCCATGTACATTTTATCAC TTTTGACGCATATGC TRQ2_0739 753612 - 754571 + | 6-phosphofructokinase TRQ2_0740 754585 - 755985 + | pyruvate kinase TRQ2_0741 755998 - 756624 + | Zn-dependent hydrolase of the beta-lactamase fold-like protein TRQ2_0742 756624 - 757136 + | hypoxanthine phosphoribosyltransferase TERM 764 757309 - 757335 + G 78 -11.7 -2.96695 | gap 1, opp_overlap 757291 757308 757312, overlap 757305 GAACACGCGGAGAAT TCA-CCAGCTCC TGAA GGAGCTGGATGA TCCTTTACTGGAAAA TERM 765 757331 - 757312 - g 83 -13.6 -2.59748 | opp_overlap 757309 757305, overlap 757291 757308 CACGCGGAGAATTCA CCAGCTCC TGAA GGAGCTGG ATGATCCTTTACTGG TERM 766 758588 - 758576 - g 77 -3.3 -5.22137 | overlap 758577 AAGGAGAAAATAAAA TCCGG CCT CAGGA ACGGTCAGATAGACG TRQ2_0743 757235 - 759526 + | ATP-dependent DNA helicase RecG TRQ2_0744 760202 - 759510 - | ABC transporter related TRQ2_0745 760918 - 760187 - | binding-protein-dependent transport systems inner membrane component TRQ2_0746 761817 - 760915 - | hypothetical protein TERM 767 761545 - 761562 + g 80 -7 -4.56607 | ATAGAACACCTTCCA CTCGTG TACACC CACGAG TTTTATCCTTACTCC TERM 768 761839 - 761860 + r 91 -10.1 -4.64861 | opp_overlap 761841, overlap 761841 ACCTCCTGAAAAAGA AAGGGAGGG TTTC CCCTCCCTG TTTATTTTACCGCAA TERM 769 761858 - 761841 - R 100 -12.7 -4.85782 | opp_overlap 761839 761841 CTCCTGAAAAAGAAA GGGAGGG TTTC CCCTCCC TGTTTATTTTACCGC TERM 770 761841 - 761858 + r 100 -12.7 -3.93868 | opp_overlap 761841, overlap 761839 CTCCTGAAAAAGAAA GGGAGGG TTTC CCCTCCC TGTTTATTTTACCGC TRQ2_0747 763610 - 761862 - | hydrogenase, Fe-only TERM 771 763529 - 763510 - G 76 -8.6 -4.03234 | opp_overlap 763509 763510 763528 GGGTGGTGACACAAA GCAGGAAT CTCT ATTCCCGC CTTTTCACAGGCTTC TERM 772 763634 - 763644 + r 72 -5.4 -4.49344 | opp_overlap 763634, overlap 763625 ACCTCCTCACAGAAT TGGT TTC ACCA TTTTGTGATAAATTT TRQ2_0748 764765 - 763707 - | hypothetical protein TRQ2_0749 766068 - 764743 - | DNA repair protein RadA TERM 773 764791 - 764823 + g 74 -3.4 -4.93316 | opp_overlap 764786 764790, overlap 764795 764814 CCCAATTATAGAGAC GGCCTCTTTGAGGT CACGC ACCTCAAAAACTCC TTTTTGCTCTTCTTC TERM 774 765955 - 765934 - G 100 -15.9 -4.81249 | opp_overlap 765934 TTCTAAATTTAAAAA CAGGGAGGG GCTT CCCTCCCTG TTTTTCCTTCTTTGA TERM 775 765934 - 765955 + g 100 -15.9 -5.04356 | opp_overlap 765934 TTCTAAATTTAAAAA CAGGGAGGG GCTT CCCTCCCTG TTTTTCCTTCTTTGA TRQ2_0750 768527 - 766065 - | ATPase TERM 776 766240 - 766250 + g 74 -5.4 -4.56597 | CTTGCCCCGTACACC GGAT CGA ATCC TTTTTCGACCAGGAA TRQ2_0751 768742 - 769656 + | PP-loop domain-containing protein TERM 777 769667 - 769641 - T 93 -2.9 -5.8901 | gap 1, opp_overlap 769643 769644 769645 769646, overlap 769644 769645 769646 AGAGAAAAGAAAAAA CAAGGCCCCCGC ATGA GCGGGGGA-TCA TTTTTTGTACTTTGT TERM 778 769643 - 769667 + T 87 -5.6 -5.43621 | gap 1, opp_overlap 769641 769644 769645 769646, overlap 769644 769645 769646 AGAAAAGAAAAAACA AGG-CCCCCGC ATGA GCGGGGGATCA TTTTTTGTACTTTGT TERM 779 769665 - 769644 - T 84 -7.1 -4.94109 | opp_overlap 769643 769644 769645 769646, overlap 769641 769645 769646 GAAAAGAAAAAACAA GGCCCCCGC ATGA GCGGGGGAT CATTTTTTGTACTTT TERM 780 769644 - 769666 + T 77 -9.1 -3.83732 | gap 1, opp_overlap 769644 769641 769645 769646, overlap 769643 769645 769646 GAAAAGAAAAAACAA GG-CCCCCGC ATGA GCGGGGGATC ATTTTTTGTACTTTG TERM 781 769664 - 769645 - T 81 -10.6 -3.52805 | opp_overlap 769644 769643 769645 769646, overlap 769644 769641 769646 AAAAGAAAAAACAAG GCCCCCGC ATGA GCGGGGGA TCATTTTTTGTACTT TERM 782 769645 - 769664 + T 81 -10.6 -3.47311 | opp_overlap 769645 769644 769641 769646, overlap 769644 769643 769646 AAAAGAAAAAACAAG GCCCCCGC ATGA GCGGGGGA TCATTTTTTGTACTT TERM 783 769663 - 769646 - T 87 -14.1 -2.68023 | opp_overlap 769645 769644 769643 769646, overlap 769645 769644 769641 AAAGAAAAAACAAGG CCCCCGC ATGA GCGGGGG ATCATTTTTTGTACT TERM 784 769646 - 769663 + T 87 -14.1 -2.6676 | opp_overlap 769646 769645 769644 769641, overlap 769645 769644 769643 AAAGAAAAAACAAGG CCCCCGC ATGA GCGGGGG ATCATTTTTTGTACT TRQ2_0752 770156 - 769665 - | hypothetical protein TRQ2_0753 770200 - 771066 + | Ppx/GppA phosphatase TRQ2_0754 771236 - 771856 + | ABC transporter related TERM 785 772569 - 772587 + G 73 -7.4 -4.17296 | AATACTCGGTGGAGT CACGATCA GTG TGAGCGTG TTTCTCTATCTGGGA TRQ2_0755 771856 - 772644 + | hypothetical protein TERM 786 772883 - 772896 + F 81 -2.3 -5.55664 | TGCAGGTTCGAGTCC TGCCG GGCG CGCCA TTTTTTTCGTGGTGA TRQ2_0756 773136 - 773399 + | stage V sporulation protein S TERM 787 773454 - 773416 - T 95 -8.3 -5.18726 | gap 1, opp_overlap 773426, overlap 773421 773426 TTTTCACAAGAAAAA GCAAAC-AAAATCCCCGC TTTT GCGGGGATTTTTGTTTTT GTTAGCCAGTATTTT TERM 788 773448 - 773421 - T 100 -12.8 -4.44392 | opp_overlap 773426, overlap 773416 773426 ACAAGAAAAAGCAAA CAAAATCCCCGC TTTT GCGGGGATTTTT GTTTTTGTTAGCCAG TERM 789 773443 - 773426 - T 100 -12.7 -5.10516 | opp_overlap 773426, overlap 773421 773416 AAAAAGCAAACAAAA TCCCCGC TTTT GCGGGGA TTTTTGTTTTTGTTA TERM 790 773426 - 773443 + T 100 -12.7 -5.74684 | opp_overlap 773426 773421 773416 AAAAAGCAAACAAAA TCCCCGC TTTT GCGGGGA TTTTTGTTTTTGTTA TRQ2_0757 774232 - 773456 - | ABC transporter related TERM 791 773719 - 773750 + g 85 -12.4 -3.38316 | overlap 773720 CTTGAACTATCTCCA TGATCTCGATCTGA TTCT TCGGGTCGAGATCG TTCGTTGGCTCGTCC TERM 792 773720 - 773749 + g 83 -13.7 -2.62668 | overlap 773719 TTGAACTATCTCCAT GATCTCGATCTGA TTCT TCGGGTCGAGATC GTTCGTTGGCTCGTC TRQ2_0758 775272 - 774238 - | transport system permease protein TRQ2_0759 776342 - 775266 - | periplasmic binding protein TERM 793 775946 - 775957 + g 77 -7.2 -4.53765 | opp_overlap 775946 775941, overlap 775941 AACTGAGAACGACAA CGGG AATC CCCG TTTTCTCCTGTATGT TRQ2_0760 776778 - 776347 - | hypothetical protein TERM 794 776517 - 776504 - G 77 -3.8 -5.1523 | opp_overlap 776504 TTCACAACAGAAAAA CCGA TGGGAT TCGG TCTGTGGGGAGAGCG TERM 795 776832 - 776807 - H 100 -7.5 -5.72207 | opp_overlap 776810 776811, overlap 776810 776811 TTTAAATTAAAAAAA TAACCCCCTGC ACGC GCAGGGGCTTT TTGGTGGAGCCGATG TERM 796 776829 - 776810 - H 93 -9.2 -4.90519 | opp_overlap 776810 776811, overlap 776807 776811 AAATTAAAAAAATAA CCCCCTGC ACGC GCAGGGGC TTTTTGGTGGAGCCG TERM 797 776810 - 776829 + H 90 -9.2 -4.72272 | opp_overlap 776810 776807 776811, overlap 776811 AAATTAAAAAAATAA CCCCCTGC ACGC GCAGGGGC TTTTTGGTGGAGCCG TERM 798 776828 - 776811 - H 93 -12.7 -3.50651 | opp_overlap 776810 776811, overlap 776810 776807 AATTAAAAAAATAAC CCCCTGC ACGC GCAGGGG CTTTTTGGTGGAGCC TERM 799 776811 - 776828 + H 93 -12.7 -3.43042 | opp_overlap 776811 776810 776807, overlap 776810 AATTAAAAAAATAAC CCCCTGC ACGC GCAGGGG CTTTTTGGTGGAGCC TERM 800 777309 - 777348 + GH 76 -6.5 -4.50257 | opp_overlap 777319, overlap 777318 777319 CACACTACACCAGCT CAAGAAAGGACGAGGAT TTAACC ATCCTCGCTTTTTCCTG TTTGTTCTCTTCTCT TERM 801 777318 - 777339 + GH 76 -4.4 -4.97461 | opp_overlap 777319, overlap 777309 777319 CCAGCTCAAGAAAGG ACGAGGAT TTAACC ATCCTCGC TTTTTCCTGTTTGTT TERM 802 777455 - 777486 + GH 84 -10.4 -3.94188 | ATCCTCGCTGAAGGT TTCTTTTTCTTTCT GATC GGGAAGAAAAAGAA TTCTTTCAAATGGCT TERM 803 778186 - 778166 - gH 87 -6.9 -5.1634 | overlap 778167 AGAAACATAGAAAAA CTCTGTCAC GAA ATGACAGAA GAGATAGAAAGGGTC TERM 804 778185 - 778167 - gH 72 -8.2 -3.67364 | overlap 778166 GAAACATAGAAAAAC TCTGTCAC GAA ATGACAGA AGAGATAGAAAGGGT TERM 805 778445 - 778435 - gH 88 -4 -5.60556 | AATAGAAAAGAAAAA TGAT AAA ATCA ACTTGCGTGTTTCTG TRQ2_0761 777203 - 778630 + | integral membrane sensor signal transduction histidine kinase TERM 806 779021 - 779004 - gf 87 -4.9 -5.4505 | opp_overlap 778997, overlap 779005 TCGTTGAAGAAAAAA CTTTTCC TTTT GGAAAAA ACTGCGGAGGAGTTC TERM 807 779043 - 779023 - gf 72 -3.2 -5.00616 | TCCTTTTGGAAAAAA CTGCGGAG GAGTT CTTCACAG AATACGAAGACTTTC TRQ2_0762 778605 - 779711 + | response regulator receiver modulated metal dependent phosphohydrolase TRQ2_0763 779638 - 780087 + | activator of Hsp90 ATPase 1 family protein TRQ2_0764 781350 - 780067 - | phosphoglucosamine mutase TERM 808 780324 - 780305 - G 71 -7.2 -4.07687 | ATCTCCTTCGCAAAA TCAGAAAG ATTT CTTCCTGA TCGCCTGAGAACTCT TERM 809 780615 - 780625 + g 74 -5.4 -4.71791 | CTATGATCCTATCTC CGTT CAC AACG TTTCTTTCTTCGTCT TERM 810 780961 - 780973 + g 79 -9.1 -4.18401 | GACAACCAAGCGGGG CGGGA AAC TCCCG TTTTCCAGTCTCTCC TRQ2_0765 782135 - 781353 - | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase TERM 811 781943 - 781953 + g 79 -3.2 -5.27938 | overlap 781934 GTCCTTCCCTTGAAA GCTT CAA GAGC TTTTTCTTTGCGACT TRQ2_0766 783309 - 782116 - | radical SAM domain-containing protein TRQ2_0767 784252 - 783278 - | DNA polymerase III, delta subunit TERM 812 783625 - 783639 + gH 74 -7.8 -4.08767 | opp_overlap 783615 783625 GGACAGTGGCAATCA CCACGG GCT CTGTGG TTTTCCACAACTGCG TERM 813 784550 - 784535 - g 78 -6.1 -4.67556 | overlap 784539 AGAAGATGTGAAAAA CGCAC AGCAAA GTGCG GGAGTTCCTGGAACA TERM 814 784795 - 784809 + G 78 -6.4 -4.72272 | ACAACGGCGAAGATG TCACTC TAT GGGTGA TTTTTGGTCAAAACG TRQ2_0768 784335 - 784904 + | hypothetical protein TERM 815 784930 - 784912 - T 100 -11.7 -5.07652 | opp_overlap 784908 784912 CCTGGTAAAACAAAA GCCCCTC TTTTC GAGGGGC TTCATTCTTCGTCGA TERM 816 784912 - 784930 + T 88 -11.7 -3.56142 | opp_overlap 784912, overlap 784908 CCTGGTAAAACAAAA GCCCCTC TTTTC GAGGGGC TTCATTCTTCGTCGA TRQ2_0769 785210 - 784932 - | hypothetical protein TERM 817 785876 - 785892 + r 80 -7.3 -4.48221 | GGGCGGGACCAGCCT GTTATCC CCG GGGTAAC TTTTATCCGTTGATC TERM 818 785960 - 785991 + r 85 -12.2 -3.36671 | gap 1, overlap 785962 CCGGGTTTCCCCCCT GCTCGGCCTGTCGGC CTC GCAGTCAGGCCG-GC TTATGCCCTTGCACT TERM 819 785962 - 785990 + r 81 -12.3 -2.61681 | overlap 785960 GGGTTTCCCCCCTGC TCGGCCTGTCGGC CTC GCAGTCAGGCCGG CTTATGCCCTTGCAC TERM 820 787074 - 787096 + r 75 -9 -3.62572 | opp_overlap 787048, overlap 787048 TACCCTTGGGCTTAC GGGGGGAGGG ATT CTCACCCTCC TTTCGCGTACTCATG TERM 821 789616 - 789636 + r 75 -8.9 -3.59979 | overlap 789617 TAGTTTCGGATGCAG CCCCACGGT TGA GCCGTGGGA TTTCACATCCGACAC TERM 822 789617 - 789635 + r 82 -12.4 -2.75844 | overlap 789616 AGTTTCGGATGCAGC CCCACGGT TGA GCCGTGGG ATTTCACATCCGACA TERM 823 789769 - 789790 + r 70 -7.3 -3.9461 | CGGGGTACCGTCATC GGTAGGG CATTTCCT CCCTACC TTATTCTTCCCCCGC TERM 824 790004 - 790040 + r 100 -14.9 -3.72695 | overlap 790037 CACCAACTACCTGAT GGGCCGCGGGCCCCTCC TCC GGCGGGGCAAGCGCCCC TTTCCTCCACCAACT TERM 825 790084 - 790099 + r 76 -10.4 -3.31144 | CGTATGGGGTATTAG CCAGGG TTTC CCCTGG TTATCCCCCTCCGGA TRQ2_0770 792690 - 790480 - | primosomal protein N' TERM 826 792007 - 792022 + g 72 -3.2 -5.00616 | opp_overlap 791977, overlap 791978 792009 TCCTTTGAAATCACC GCGAAG GATC CTTCTC TTTTTTGGAAGAACG TERM 827 792380 - 792370 - G 71 -6.8 -4.02132 | overlap 792362 GTCGAAATCCAGAAA CGGA CTC TCCG AAACAACCACTTCCT TRQ2_0771 793543 - 792692 - | hypothetical protein TERM 828 793395 - 793365 - G 73 -7.7 -4.14652 | gap 1 ATCAAAAAGAGCAAA CCGTTGAGTATGTA CATC CACACAC-CAACGG GGATCGGCACAAAAC TERM 829 793502 - 793530 + g 80 -6.1 -4.80882 | opp_overlap 793499 793509 GGCAGTGATCAACGT TCCAAGAGTAC TCAGCAC GTACTCTTTGA TTTTTCCTATCAACT TRQ2_0772 794449 - 793568 - | hypothetical protein TERM 830 794351 - 794376 + g 80 -6.9 -4.63486 | overlap 794350 TTCCCTGAAGATCAC CCATCTCTTTT CAGG AGAAGTGATGG TTTTCTTCAGAAGAT TRQ2_0773 794711 - 794430 - | phosphopantetheine-binding TERM 831 794733 - 794750 + r 75 -8.3 -3.85817 | opp_overlap 794734, overlap 794734 794749 CTACCACAATTTTAA AGGGGGC CGAA GCCCCCG TTTATCAGAACAGGT TERM 832 794749 - 794734 - R 89 -11.8 -3.70068 | opp_overlap 794733 794734 TACCACAATTTTAAA GGGGGC CGAA GCCCCC GTTTATCAGAACAGG TERM 833 794734 - 794749 + r 80 -11.8 -2.91276 | opp_overlap 794734, overlap 794733 TACCACAATTTTAAA GGGGGC CGAA GCCCCC GTTTATCAGAACAGG TRQ2_0774 796926 - 794755 - | V-type H(+)-translocating pyrophosphatase TRQ2_0775 800244 - 796930 - | reverse gyrase TERM 834 797256 - 797269 + g 100 -3.9 -6.14618 | AGAGAGGAACGGTGT GTTTT TTGT AAAAC TTTTTTTCTTTTATC TERM 835 797915 - 797930 + g 100 -4 -5.86465 | overlap 797907 TCCAGAACAAGGAGA GTGAAA TCCT TTTCGC TTTTTTTGTATTCTT TERM 836 800127 - 800176 + g 93 -10.8 -4.50627 | gap 1, opp_overlap 800124 800132 800154, overlap 800132 GAGCCCTATAAATAT CAGAAGGGGAC-TCCTCGAGAAG ACAAA CTTCACAAGGAAGTCCCCTTTCG TTTCTTTCATCGGTG TERM 837 800171 - 800132 - G 93 -13.7 -3.59024 | gap 1, opp_overlap 800127 800132, overlap 800124 800154 CTATAAATATCAGAA GGGGAC-TCCTCGAGAAG ACAAA CTTCACAAGGAAGTCCCC TTTCGTTTCTTTCAT TERM 838 800132 - 800171 + g 91 -11.5 -4.28115 | gap 1, opp_overlap 800132 800124 800154, overlap 800127 CTATAAATATCAGAA GGGGAC-TCCTCGAGAAG ACAAA CTTCACAAGGAAGTCCCC TTTCGTTTCTTTCAT TRQ2_0776 801449 - 800235 - | adenosylhomocysteinase TERM 839 801134 - 801177 + g 70 -9 -3.31208 | gap 1, overlap 801132 801130 TGAAGTCCGGTCTTT CGTCGAGAACTTTCAT-GAGA TTT TCTCGATAAATGTTCTCGTCG TGTGTTCTTCTCGCA TRQ2_0777 801901 - 801446 - | HAD superfamily hydrolase TRQ2_0778 802119 - 801898 - | hypothetical protein TRQ2_0779 802747 - 802121 - | CoA-binding domain-containing protein TRQ2_0780 805231 - 802757 - | leucyl-tRNA synthetase TERM 840 805051 - 805070 + g 80 -7.2 -4.62336 | TCTTGTATCTTGCGA CTATGTCA CCTA TGACGTAG TTTTTCACGTGCCCT TERM 841 805532 - 805512 - g 72 -9 -3.54424 | GTTGAGCCTGTGAAA CCCGCAGA AGGCA TCTACGGG AAAATGATGGAAAAA TRQ2_0781 805323 - 806495 + | phosphopentomutase TERM 842 807121 - 807111 - g 79 -3.2 -5.28942 | overlap 807117 CAGGGGAAAGAAAAA GAGA AGC CCTC AAAGTGATGGAAGAT TRQ2_0782 806492 - 807799 + | FolC bifunctional protein TRQ2_0783 807796 - 808362 + | Holliday junction DNA helicase RuvA TRQ2_0784 809127 - 808339 - | hypothetical protein TERM 843 808970 - 808953 - G 72 -6.3 -4.26344 | overlap 808955 ATACTCCCACCAAAA CACCTGT TCCC ACAGGTA TCAGCACCTTCAGAG TRQ2_0785 809948 - 809130 - | TPR repeat-containing protein TRQ2_0786 812260 - 809945 - | hypothetical protein TERM 844 810112 - 810131 + g 70 -2 -5.0133 | overlap 810109 810113 AAACAACCAGTATCC TGCCCTGA AAGT TCAGGACC TTTTTTGGAACAGTG TERM 845 810660 - 810646 - G 74 -5.6 -4.65895 | TGTCCCAGGCAAAAA CTCCCG ACT CGGTAG CGATGTAGACTTCCT TRQ2_0787 813075 - 812257 - | polyprenyl synthetase TRQ2_0788 813601 - 813056 - | hypothetical protein TERM 846 813686 - 813671 - RH 76 -5.4 -4.87626 | TTTCAATACGAAAAA GGAACC AACC AGTTCC TGTAGAATCCTATTT TERM 847 813837 - 813825 - gR 74 -3.4 -5.00616 | CCTCTCCCGAAAAAA TCGA AGTAG TCGA GGACGGTGAAACGTT TERM 848 814162 - 814174 + Gr 71 -7.7 -3.72027 | AGGGACAGGCGGTTT CGGAT ACG ATCCG TTCTTCATACCGGAT TRQ2_0790 815138 - 814257 - | prolipoprotein diacylglyceryl transferase TRQ2_0789 813719 - 814309 + | RdgB/HAM1 family non-canonical purine NTP pyrophosphatase TERM 849 814337 - 814349 + gT 76 -4.7 -4.79451 | TCAGCACGGCACTCA GCAGC TGA GCAGC TTTTATGTTTCCAAT TERM 850 814430 - 814450 + gT 72 -5.4 -4.37534 | opp_overlap 814428 814430 AGAGGACAAAATAGA GGCACG TTACTTCGC CGTGCC TTTTCCTGTACCTTT TRQ2_0791 815380 - 815135 - | hypothetical protein TRQ2_0792 815432 - 815881 + | flavin reductase domain-containing protein TERM 851 815880 - 815906 + F 100 -10.9 -5.1361 | opp_overlap 815884, overlap 815884 AACACGAACTGTTGT GAAAGGCAGGG CTCGC CCCTGCCTTTA TTTTTTCACGTTTCT TERM 852 815884 - 815902 + F 100 -11.7 -5.05153 | opp_overlap 815884, overlap 815880 CGAACTGTTGTGAAA GGCAGGG CTCGC CCCTGCC TTTATTTTTTCACGT TERM 853 815902 - 815884 - f 88 -11.7 -3.54459 | opp_overlap 815884 815880 CGAACTGTTGTGAAA GGCAGGG CTCGC CCCTGCC TTTATTTTTTCACGT TRQ2_0793 815974 - 817278 + | alkaline phosphatase TERM 854 817297 - 817276 - T 70 -7.3 -3.91798 | opp_overlap 817276, overlap 817279 GAACCCGTAACGAAA TGAGGGG CGATCTGC CCCCTCA TTTGAACACATCGAG TRQ2_0794 818953 - 817295 - | prephenate dehydratase TERM 855 819525 - 819511 - g 80 -5.7 -5.0133 | opp_overlap 819510 GAGTGGCTGAAAAAA CAGGA GTTGA TCCTG CTACCTTTCATGGCC TRQ2_0795 819151 - 821022 + | hypothetical protein TERM 856 821041 - 821024 - T 95 -12.7 -3.61764 | opp_overlap 821024 CGATGAATTTTTAAA GCGGGGA GAAT TCCCCGC TTTTTTAAAGTCCGA TERM 857 821024 - 821041 + T 100 -12.7 -5.0538 | opp_overlap 821024 CGATGAATTTTTAAA GCGGGGA GAAT TCCCCGC TTTTTTAAAGTCCGA TRQ2_0796 821693 - 821046 - | hypothetical protein TRQ2_0797 822251 - 822799 + | hypothetical protein TERM 858 822790 - 822779 - f 71 -2.2 -5.0666 | GAGTTAAAAAATAAA CTCA AAAA CGAG GAGGTATAAAAGATG TRQ2_0798 822803 - 822985 + | ribosomal protein L32 TERM 859 823024 - 823053 + GF 72 -6.3 -4.27316 | opp_overlap 823026 TGATGGGTGGTGACA GAGCGCCCGATGA AATT TTGAAGGGCGCTC TTTTGGCTTCAAAAG TERM 860 823399 - 823420 + GF 78 -6.7 -4.58773 | gap 1, overlap 823394 823404 GGGCGAACGCCAAGG TCAGACCAGA GCA TCTGGT-TGA TTTTGCTTTCATGGG TERM 861 823404 - 823416 + GF 71 -7.7 -3.78998 | overlap 823399 823394 AACGCCAAGGTCAGA CCAGA GCA TCTGG TTGATTTTGCTTTCA TERM 862 823743 - 823759 + GF 70 -6.6 -4.08767 | TCCCTCCTTGGGGCG CTTCTC ATGAA GAGAAG TTTTGACAAGATGAA TRQ2_0799 822990 - 823973 + | fatty acid/phospholipid synthesis protein PlsX TRQ2_0800 823945 - 825765 + | glucosamine--fructose-6-phosphate aminotransferase, isomerizing TRQ2_0801 825783 - 826115 + | iojap-like protein TRQ2_0802 826129 - 827349 + | ATP-dependent Clp protease, ATP-binding subunit ClpX TERM 863 828293 - 828277 - g 86 -9.4 -4.49644 | opp_overlap 828277 ATGAAAAAGCGAAAA GGGGGA TGTTT TCCCCC TTGAATTTGAACGCC TRQ2_0803 827346 - 828329 + | glycoprotease family metalloendopeptidase TERM 864 828345 - 828361 + T 91 -8.7 -4.97405 | TCTTTCTTTTCGCTT GAAGCGG ACG CCGTTTC TTTCTTTTTCTCACT TRQ2_0804 828553 - 828326 - | FmdB family regulatory protein TERM 865 828487 - 828507 + g 76 -8.3 -4.04806 | TAACCTCCGGTGATT CGTTTATGC CGT GCATAACCG TTGTTTCGTATCCAC TERM 866 828708 - 828722 + H 79 -4.2 -5.22006 | TACCATTAATCTGTC GCCAGT TCA ACTCGC TTTTTCTTCTGATAA TRQ2_0805 828776 - 830128 + | response regulator receiver modulated diguanylate cyclase TERM 867 830184 - 830203 + G 70 -5 -4.41241 | overlap 830185 AAGCTCGTTTCGGAT CTGGAAAC ACCG GTTTCCAC TTTTATGAAGGTTTC TRQ2_0806 830157 - 831530 + | anthranilate synthase component I TERM 868 832115 - 832087 - g 100 -8.3 -5.39755 | overlap 832088 GAGAATCATAAAAAA CTTCCTGAACATC CAG AATATTCAGGAAA AGAAAGTTTCCGAAG TERM 869 832114 - 832088 - g 79 -9.6 -3.82226 | overlap 832087 AGAATCATAAAAAAC TTCCTGAACATC CAG AATATTCAGGAA AAGAAAGTTTCCGAA TRQ2_0807 831527 - 833167 + | anthranilate phosphoribosyltransferase TERM 870 833802 - 833781 - g 70 -5.1 -4.41241 | overlap 833784 GAAAGTGGCATAAAA GATCCCAGA GAAC TCAAGGATC TGCGGGGGAAGGTGA TRQ2_0808 833208 - 833900 + | indole-3-glycerol-phosphate synthase TRQ2_0809 833888 - 834505 + | phosphoribosylanthranilate isomerase TERM 871 835544 - 835507 - g 82 -12.9 -3.05596 | gap 1 GATGCCTTCATCGAA CTTTCAAG-GCTGGAAGG GAT CATTCCAGCACTCGAAAG CTCTCACGCACTGGC TRQ2_0810 834508 - 835677 + | tryptophan synthase, beta subunit TRQ2_0811 835674 - 836393 + | tryptophan synthase, alpha subunit TERM 872 836418 - 836391 - T 100 -15 -4.08692 | opp_overlap 836397, overlap 836397 GAACTCCTCGGAAAA TAAAAACCCCGC CTGC GCGGGGTTTTCA CACGTACTGGTAACC TERM 873 836412 - 836397 - T 100 -11.8 -5.45802 | opp_overlap 836397, overlap 836391 CTCGGAAAATAAAAA CCCCGC CTGC GCGGGG TTTTCACACGTACTG TERM 874 836397 - 836412 + T 93 -11.8 -4.10161 | opp_overlap 836391 836397 CTCGGAAAATAAAAA CCCCGC CTGC GCGGGG TTTTCACACGTACTG TRQ2_0812 837351 - 836416 - | radical SAM domain-containing protein TRQ2_0813 837929 - 837357 - | beta-lactamase domain-containing protein TRQ2_0814 838720 - 837926 - | FAD-dependent pyridine nucleotide-disulphide oxidoreductase TRQ2_0815 839265 - 838681 - | isochorismatase hydrolase TERM 875 839013 - 839001 - GR 73 -2.6 -5.09173 | GAACATCGGAAAAAA CGGG AACGG CCCA CCTTTTATCCACTTC TRQ2_0816 840043 - 839267 - | flagellin domain-containing protein TERM 876 840255 - 840234 - R 100 -12.3 -4.5442 | opp_overlap 840234 840253, overlap 840235 GGTTGAAGCAGAAAA CCCTGCCTC ATAA GAGGCAGGA TGGTTCACCATTCGT TERM 877 840234 - 840255 + r 71 -10.1 -2.73721 | opp_overlap 840234 840235, overlap 840253 GGTTGAAGCAGAAAA CCCTGCCTC ATAA GAGGCAGGA TGGTTCACCATTCGT TERM 878 840254 - 840235 - R 100 -13.6 -3.3217 | opp_overlap 840234 840253, overlap 840234 GTTGAAGCAGAAAAC CCTGCCTC ATAA GAGGCAGG ATGGTTCACCATTCG TRQ2_0817 841414 - 840260 - | major facilitator transporter TERM 879 840407 - 840394 - G 84 -8.1 -4.60073 | CAGAGAACCAGAAAA CACCG TACA CGGTG AAGAACATTCCGTAA TERM 880 841631 - 841608 - g 76 -4.4 -5.07567 | opp_overlap 841612 TCAGAGTGGAAAAAA GGGAAGCCGC TTAC GTGGCCTTCC GTGGGAAACCGCCTT TRQ2_0818 841475 - 842551 + | peptidase dimerisation domain-containing protein TERM 881 843700 - 843685 - gT 74 -3.3 -4.92783 | overlap 843676 AACTGATGAGAAAAA TTCTC GGTGAT GAGAA GCCCATAGATTTCAG TRQ2_0820 844732 - 843875 - | integral membrane sensor signal transduction histidine kinase TRQ2_0819 842541 - 843929 + | oxaloacetate decarboxylase alpha subunit TERM 882 844002 - 844032 + gT 100 -8.4 -6.23317 | gap 1, overlap 844006 TCGAAGAATTCTCTT GCGA-GGTACAGG CCCAGT CCTGTACCTTTGC TTTTTTTCTTTTTCT TERM 883 844006 - 844027 + gT 93 -10.2 -4.57518 | overlap 844002 AGAATTCTCTTGCGA GGTACAGG CCCAGT CCTGTACC TTTGCTTTTTTTCTT TERM 884 844338 - 844356 + gT 77 -6.8 -4.41844 | opp_overlap 844338 TCGAGCTTGGCAAAT TCGTAGAA TTC TTCTATGA TTTTCTGCAAATTTT TRQ2_0821 845391 - 844729 - | two component transcriptional regulator TRQ2_0822 846185 - 845388 - | ABC-3 protein TERM 885 845659 - 845671 + g 73 -4.1 -4.85599 | GAGGTGATCAGAAAA CGGAT GAG ATCTG TTTTTATGCCATAAA TRQ2_0823 846904 - 846182 - | ABC transporter related TERM 886 846819 - 846837 + g 71 -9.6 -3.28745 | opp_overlap 846816 846815 846819, overlap 846815 ACTCCAACGAATTCA CCTTCTTC CAC GGAGAAGG TTACATTCTTCAGGA TRQ2_0824 847704 - 846901 - | periplasmic solute binding protein TERM 887 847057 - 847077 + g 77 -3.3 -5.14965 | overlap 847040 CTGCTGTGGTTCTCT GAACAGG GCAGCAA TCTGTTC TTTTTTCCTGAGGAT TRQ2_0825 848066 - 847701 - | ferric uptake regulator family protein TERM 888 847763 - 847790 + g 74 -3.5 -5.03145 | AAAACAGATGACTTT CTTCAGAAAAA TCGTAC TTTTCCTGGAG TTTTTTAAGAAATTC TERM 889 848074 - 848098 + H 91 -11.5 -3.77808 | opp_overlap 848082 ATCCTCATACTCTCA CCTGCAAATGC AAA GCATTTGCAAG TTATATTGTACTACA TERM 890 848239 - 848257 + H 77 -4.6 -5.03747 | CAGATGTCGTATTCG TCGAAG CTGAGTT CTTCGA TTTTTTAAGGGGTTT TRQ2_0826 848322 - 849419 + | lysine 2,3-aminomutase YodO family protein TRQ2_0827 849990 - 849436 - | nitroreductase TRQ2_0828 850850 - 849993 - | acetamidase/formamidase TERM 891 850379 - 850349 - G 100 -15.5 -3.7732 | CTCCCAGAGCAAGAA GTGCACCTTCCTG GAACA CTGGAAGGTGCAC CGTGACGTTCTCTGT TRQ2_0829 853346 - 850863 - | ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent TERM 892 852022 - 852032 + g 91 -6.8 -5.45802 | overlap 852017 GAGATCTCAAGGAGC GGGA AGT TCCC TTTTTCTTTTCCGAG TRQ2_0830 853505 - 854233 + | radical SAM domain-containing protein TERM 893 854251 - 854235 - T 85 -10.1 -4.15788 | opp_overlap 854235 AACTCTTTCAATAAA GAGGGCA GAG CGCCCTC TTTTCAAGATCTGAA TERM 894 854235 - 854251 + T 81 -9.4 -4.13014 | opp_overlap 854235 AACTCTTTCAATAAA GAGGGC AGAGC GCCCTC TTTTCAAGATCTGAA TERM 895 854260 - 854290 + T 87 -6.2 -5.24449 | opp_overlap 854261 854269, overlap 854261 CGCCCTCTTTTCAAG ATCTGAACATCTCT TTG AGAGATGTGTAGAG TTTTTTGAATTTCTC TERM 896 854261 - 854289 + T 79 -9.7 -3.73043 | opp_overlap 854261 854269, overlap 854260 GCCCTCTTTTCAAGA TCTGAACATCTCT TTG AGAGATGTGTAGA GTTTTTTGAATTTCT TRQ2_0831 855733 - 854255 - | xylulokinase TRQ2_0832 857295 - 855733 - | ABC transporter related TERM 897 856830 - 856854 + g 82 -11.5 -3.53811 | GGGCGGTGGTGAGAT TTCTCACCAGA GCG TCTGGAGAGAA TTTGGCGCCGATGAG TERM 898 857278 - 857306 + g 100 -14.6 -4.66264 | opp_overlap 857280, overlap 857280 TCGATCACCCCTGAA AACGAGGAGGGG AAACA CCCCTCCTCGTG TTTTTCAGAATTTTA TERM 899 857280 - 857304 + g 100 -17.2 -3.9318 | opp_overlap 857280, overlap 857278 GATCACCCCTGAAAA CGAGGAGGGG AAACA CCCCTCCTCG TGTTTTTCAGAATTT TERM 900 857304 - 857280 - G 100 -17.2 -4.10161 | opp_overlap 857280 857278 GATCACCCCTGAAAA CGAGGAGGGG AAACA CCCCTCCTCG TGTTTTTCAGAATTT TRQ2_0833 858282 - 857311 - | periplasmic binding protein/LacI transcriptional regulator TRQ2_0834 859026 - 858307 - | polysaccharide deacetylase TRQ2_0835 859994 - 859041 - | monosaccharide-transporting ATPase TERM 901 859810 - 859780 - G 95 -14.6 -3.54653 | AGCGCCACCATAGAA CCGGGGGAGAGGTC GAT GGCTCCTCCCCCGG AGATGATGACAAAGG TRQ2_0836 861170 - 860007 - | iron-containing alcohol dehydrogenase TRQ2_0837 862320 - 861184 - | ROK family protein TRQ2_0838 863390 - 862428 - | radical SAM domain-containing protein TERM 902 863384 - 863396 + g 71 -3.4 -4.73388 | TCTCAATTTTCTTTT TCGA CATAC TCGA TTTTTGCTCCCAGTT TRQ2_0839 864636 - 863371 - | UDP-N-acetylglucosamine 1-carboxyvinyltransferase TERM 903 864544 - 864568 + g 76 -4.2 -5.00884 | ATCGCATAGAATCGC CGCTGCCATT ATTGG AAGAGCAGCG TTTTTTGAACCCGAT TRQ2_0840 865209 - 864637 - | putative diguanylate cyclase TRQ2_0841 865286 - 866470 + | RecB family-like nuclease TRQ2_0842 867411 - 866452 - | inner-membrane translocator TERM 904 867189 - 867169 - G 72 -6.2 -4.3534 | gap 1 GTGGAACCAGGAAAA TCCGATCCC TATG GGGAT-GGA AAGCAAGAAACCGAG TRQ2_0843 868442 - 867408 - | inner-membrane translocator TRQ2_0844 869962 - 868439 - | ABC transporter related TERM 905 868483 - 868500 + g 76 -4.1 -5.07567 | CTGCCATCATGAGCC CTACTTC CTCT GGAGTGG TTTTTTCCGGTCTGA TERM 906 868803 - 868825 + g 72 -6.5 -4.30791 | opp_overlap 868802, overlap 868802 GGCCTGATATCGAAC TTTTCAAAA AGTTG TTTTGAAAA TCTTTTTATTTCCTT TERM 907 869582 - 869593 + g 79 -4.4 -5.23016 | TATTGTTAATCCGTA CTCT TCCG AGAG TTTTTTAACTTCTTT TERM 908 869999 - 869980 - R 100 -13.6 -4.10161 | GATCACCCCTGAAAA GAGGGGGA GGAC TCCCCCTC AGAATGGGAATTCGA TRQ2_0845 871077 - 869998 - | basic membrane lipoprotein TERM 909 870685 - 870702 + g 80 -9.9 -3.92542 | opp_overlap 870680 870684 CGCCACGTAACCTAC CAGGAAG GCGG CTTCCTG TTCTTTGAAGGTGAA TRQ2_0846 872942 - 871074 - | hypothetical protein TERM 910 872042 - 872020 - G 78 -6.4 -4.67635 | GTGAAAACGACAAAA GTTGAAAAGA TCA TGTTTTCAAC GGTGTTGAGATACAG TERM 911 872311 - 872345 + g 76 -5.1 -4.87803 | overlap 872317 TACTCGGCTTGGTTT TTCGAAGAGGCGATT TCCTC GATCGCTTCTTTTAA TTTTGTTTCCAGATC TERM 912 872317 - 872339 + g 80 -6.3 -4.81644 | overlap 872311 GCTTGGTTTTTCGAA GAGGCGATT TCCTC GATCGCTTC TTTTAATTTTGTTTC TRQ2_0847 872993 - 875059 + | DNA ligase, NAD-dependent TERM 913 875143 - 875160 + G 70 -9.9 -3.08471 | opp_overlap 875140, overlap 875125 CCACCTGAATTACGA GGTTCTC TGTT GAGAACC TTCGATGACCTTGTG TRQ2_0848 875050 - 875814 + | hypothetical protein TERM 914 876639 - 876615 - g 72 -8.7 -3.7511 | opp_overlap 876615, overlap 876619 876626 876629 TTCGTCATAAGAGAA GAAATGAAGAA GTA TTCTCCATTCC TTTTGGAGAAACCCG TERM 915 876635 - 876619 - g 72 -5.9 -4.49353 | opp_overlap 876615, overlap 876615 876626 876629 TCATAAGAGAAGAAA TGAAGAA GTA TTCTCCA TTCCTTTTGGAGAAA TRQ2_0849 875811 - 877118 + | GTP-binding protein Obg/CgtA TERM 916 877354 - 877376 + G 72 -5 -4.59109 | AGAGGAGGCGTTTCT TACTCTAT CTTCACA ATAGAGTA TTTTTCAGAGATCTA TRQ2_0850 877102 - 877692 + | nicotinate (nicotinamide) nucleotide adenylyltransferase TRQ2_0851 877682 - 878602 + | NifR3 family TIM-barrel protein TRQ2_0852 878605 - 879075 + | rubrerythrin TERM 917 879164 - 879188 + G 70 -10.1 -2.97707 | overlap 879161 879168 AAGTTGAAGGCGATA TCGATCCTTTC TGA GAGAGGATTGA TGGTTGTTCGTGTGG TERM 918 879337 - 879347 + G 72 -3.2 -5.01732 | GTTGAACATTCTGGC TCGT CAG ACGG TTTTTTCAAAGCGTT TERM 919 879994 - 879978 - g 74 -3.7 -4.93296 | overlap 879989 CCATTATCAGAAAAA CCGAA GAAATGG TTCGG AAGATATCCGAAGGG TERM 920 879998 - 880026 + G 71 -6.8 -4.08216 | gap 1, opp_overlap 879989 879999 880001, overlap 879999 880001 GAAATGGTTCGGAAG ATATC-CGAAGGG AAAA CCCTTCGAGATAC TTTTGCAGAAAGTGG TERM 921 880025 - 879999 - g 73 -10.3 -3.0264 | gap 1, opp_overlap 879999 879998 880001, overlap 879989 880001 AAATGGTTCGGAAGA TATC-CGAAGGG AAAA CCCTTCGAGATA CTTTTGCAGAAAGTG TERM 922 879999 - 880025 + G 73 -10.3 -3.04715 | gap 1, opp_overlap 879989 879999 880001, overlap 879998 880001 AAATGGTTCGGAAGA TATC-CGAAGGG AAAA CCCTTCGAGATA CTTTTGCAGAAAGTG TRQ2_0853 879077 - 880276 + | type II secretion system protein TRQ2_0854 880273 - 880656 + | hypothetical protein TRQ2_0855 880658 - 881638 + | hypothetical protein TRQ2_0856 881610 - 882158 + | hypothetical protein TRQ2_0857 882155 - 882571 + | hypothetical protein TERM 923 882915 - 882889 - g 72 -6.6 -4.2828 | opp_overlap 882889 882892, overlap 882892 GGTGATGGATTAAAA GTATTTCTCTCC GAT GGAGAAAAACTC TTTGAGGTGTCGGGC TRQ2_0858 882568 - 883029 + | hypothetical protein TRQ2_0859 883045 - 886893 + | type II and III secretion system protein TERM 924 886916 - 886901 - g 100 -11.8 -4.74518 | opp_overlap 886901 886904 AACCATGAAAAGAAA GCCGGC CGTG GCCGGC CTTTTTTATCCCTCC TERM 925 886901 - 886916 + G 93 -11.8 -3.76182 | opp_overlap 886901, overlap 886904 AACCATGAAAAGAAA GCCGGC CGTG GCCGGC CTTTTTTATCCCTCC TERM 926 886904 - 886917 + G 100 -9.5 -5.28176 | opp_overlap 886901, overlap 886901 CATGAAAAGAAAGCC GGCCG TGGC CGGCC TTTTTTATCCCTCCA TERM 927 887177 - 887150 - g 79 -9.8 -3.75169 | opp_overlap 887151, overlap 887153 887155 TATTATCGGACCAAA TCACACGGGTCT GGGA AGACCCGTGGGT GTGTGGCCAGAGGGG TERM 928 887151 - 887176 + G 82 -13.3 -2.87132 | opp_overlap 887150 887153 887155 ATTATCGGACCAAAT CACACGGGTCT GGGA AGACCCGTGGG TGTGTGGCCAGAGGG TERM 929 887174 - 887153 - g 88 -14.5 -2.97171 | opp_overlap 887151, overlap 887150 887155 TATCGGACCAAATCA CACGGGTCT GGGA AGACCCGTG GGTGTGTGGCCAGAG TERM 930 887172 - 887155 - g 75 -11.3 -3.03701 | opp_overlap 887151, overlap 887153 887150 TCGGACCAAATCACA CGGGTCT GGGA AGACCCG TGGGTGTGTGGCCAG TRQ2_0860 886890 - 887723 + | hypothetical protein TERM 931 887713 - 887726 + T 72 -6.7 -4.17958 | overlap 887722 GGTATCTCAGTGCGA TCCTC TTCT GAGGA TTTCTTCGAGCTCTT TRQ2_0861 889125 - 887704 - | integral membrane protein MviN TERM 932 887875 - 887887 + g 76 -4.9 -4.82901 | TGCAGAAGCCAGGCT GATTT TGA AAATC TTTTTGTCGAAGGAG TERM 933 888124 - 888110 - G 72 -5 -4.67354 | AACAGAGACACAAAA CACAAT CCA ATTGCG TACATGAGGAGTATC TRQ2_0862 889193 - 889471 + | anti-sigma-28 factor, FlgM TERM 934 889544 - 889530 - g 71 -7.2 -4.08571 | GGAGAATATGAGAAA TCTTCT GGA AGAAGA ACTGGAAGCGATTGT TRQ2_0863 889468 - 889914 + | hypothetical protein TRQ2_0864 889918 - 892494 + | flagellar hook-associated protein FlgK TRQ2_0865 892500 - 893414 + | flagellar hook-associated protein 3 TRQ2_0866 893419 - 893868 + | hypothetical protein TERM 935 894088 - 894062 - f 100 -15.2 -3.75629 | opp_overlap 894060 894059 CACGGTGAAGGGAAA CCACCTTCCTCG GCA CCAGGAAGGTGG GAATATTCTTTTTCA TERM 936 894160 - 894180 + G 70 -9 -3.30441 | TTCTTTTTGCCACCG CCGTTGCG CTCGC CGTAACGG TTGTGGACGATGCTG TRQ2_0867 894117 - 895010 + | periplasmic binding protein TERM 937 895031 - 895041 + G 78 -5.4 -4.90079 | CTCGTTTTTCCGATA CTGA TAC TCAG TTTTCTTCTTGGAAT TERM 938 895078 - 895103 + G 72 -9 -3.62354 | TGGAAGTGTGCCTCT GGACCCCC TTGAAGTGCT GGGGGTCC TCTTTGGTTTGAAAG TERM 939 895900 - 895941 + G 76 -8.7 -4.04997 | gap 1 CTTCTTTTCTCCCAC GGAGCTTCCAGTCGGCGTTG TAA CGGCGTTGATTGG-AGCACC TTTCCTTGCTTTCCT TRQ2_0868 895007 - 895975 + | transport system permease protein TERM 940 896062 - 896045 - g 72 -4.9 -4.55887 | TCTGAAAAACATAAA CCTTTCT GTGA AAAAAGG GGAGTTTTTCGGCAT TERM 941 896675 - 896635 - g 100 -10.4 -4.95155 | gap 1 GTGAGATGATAAAAA CCGGAGCACCCCCAGAGGT GGTG ACCGA-AGAGGTGCTCCGG AATACATTCGAAACG TRQ2_0869 895977 - 896747 + | ABC transporter related TRQ2_0870 897707 - 896730 - | Acetyl xylan esterase TERM 942 897203 - 897190 - G 72 -6.7 -4.26903 | opp_overlap 897198 TCTACCCGAGGAAAA GAAGC AGCG GCTTC AACGGCTCTGACAGC TRQ2_0871 900050 - 897714 - | glycoside hydrolase family 3 protein TERM 943 898494 - 898532 + g 89 -11.2 -4.08706 | gap 1 GAGGTTTGCCATGTC TCTGGACTCACCGGTTG TGCAAT CAAG-GGTGAGTCCAGA TTTGTCTCCTACGAC TERM 944 899642 - 899653 + g 76 -2.2 -5.37043 | TCATATCCTCTCTGA TGGC GGTG GTCA TTTTTTCTATGAGAT TRQ2_0872 901050 - 900088 - | oligopeptide/dipeptide ABC transporter, ATPase subunit TERM 945 900222 - 900234 + g 79 -7.7 -4.49981 | GATACTCTGCCTGCT CTGTC TCG GACAG TTTTATCCTGATGTC TERM 946 900786 - 900797 + g 73 -4.4 -4.7908 | CCTGTATTTCCTTCA GAAG TTCT CTTC TTTCTTTCTCTTTTT TERM 947 900988 - 901027 + g 81 -3.6 -5.36441 | gap 1 AGCCACTATCCTCGT TCTGGAGAAGATACTC-CC TAT GGTGAAGATCTTCGTCAGA TTTTTTATCTCAAGA TRQ2_0873 902044 - 901037 - | oligopeptide/dipeptide ABC transporter, ATPase subunit TERM 948 901097 - 901117 + g 72 -4.7 -4.62085 | TCTGTGGCCCGGCAG GTATTCCTT GAG AGGGGGTAC TTCTTTTTTACACCT TRQ2_0874 902900 - 902046 - | binding-protein-dependent transport systems inner membrane component TRQ2_0875 903924 - 902917 - | binding-protein-dependent transport systems inner membrane component TERM 949 903951 - 903977 + r 74 -10.7 -2.62439 | opp_overlap 903952, overlap 903950 903948 TCCTCTTCTCTTTAA AGGACCGGGGG TTGTC CCCCCGGCCCC CTGTTTGAAAGTATT TERM 950 903976 - 903952 - R 100 -16.4 -3.53012 | opp_overlap 903951 903950 903948 CCTCTTCTCTTTAAA GGACCGGGGG TTGTC CCCCCGGCCC CCTGTTTGAAAGTAT TRQ2_0876 905878 - 904001 - | extracellular solute-binding protein TRQ2_0877 906098 - 907141 + | endo-1,4-beta-xylanase TERM 951 907164 - 907134 - T 100 -17 -4.5002 | opp_overlap 907139 907142, overlap 907139 AAAAGATAGAAGAAA GAAAATGAGGGGGC GAT GCCCCCTTATTTTC AGCAGTATCTCTTTT TERM 952 907139 - 907159 + T 100 -13.3 -4.10925 | opp_overlap 907134 907139, overlap 907142 ATAGAAGAAAGAAAA TGAGGGGGC GAT GCCCCCTTA TTTTCAGCAGTATCT TERM 953 907159 - 907139 - T 100 -11.1 -5.16038 | opp_overlap 907139 907142, overlap 907134 ATAGAAGAAAGAAAA TGAGGGGGC GAT GCCCCCTTA TTTTCAGCAGTATCT TERM 954 907142 - 907156 + T 100 -12.8 -4.17762 | opp_overlap 907139 907134, overlap 907139 GAAGAAAGAAAATGA GGGGGC GAT GCCCCC TTATTTTCAGCAGTA TRQ2_0878 908245 - 907163 - | mannonate dehydratase TERM 955 908201 - 908212 + g 74 -5.8 -4.59773 | TATTTGTTCCAGTGT CACG GTAT CGTG TTTTTCACCATACCA TRQ2_0879 909861 - 908242 - | mannitol dehydrogenase domain-containing protein TERM 956 908413 - 908427 + g 78 -5.7 -4.78848 | ATGATCATCCGTGGA TTCGG GATCG CCGAA TTTTATCTTTGAAAC TERM 957 909728 - 909759 + g 76 -4.4 -5.02287 | overlap 909731 909734 CCCCTGAATATGTTT CCACCACCGAAATG AACC CATTTCGGTTGTTC TTTTGTATTTTTCTC TERM 958 909731 - 909756 + g 93 -10.5 -4.5478 | overlap 909728 909734 CTGAATATGTTTCCA CCACCGAAATG AACC CATTTCGGTTG TTCTTTTGTATTTTT TERM 959 909734 - 909753 + g 90 -10.8 -4.30704 | overlap 909731 909728 AATATGTTTCCACCA CCGAAATG AACC CATTTCGG TTGTTCTTTTGTATT TRQ2_0880 910893 - 909874 - | ribokinase-like domain-containing protein TRQ2_0881 911501 - 910890 - | 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase TERM 960 911167 - 911198 + g 81 -3.8 -5.27335 | gap 1, overlap 911147 911146 TTTACAAGTTCGGTG GGTGTCATC-ACA CCGGGCA TGTAGAAGACACC TTTTTCTTTGCAGAA TERM 961 911567 - 911547 - R 70 -2.5 -5.01732 | AATGTTTCGAAAAAA CCAAAAATC ATA GATCTACGG ATTTCAATATCCAAG TRQ2_0882 912311 - 911571 - | IclR family transcriptional regulator TERM 962 912830 - 912799 - g 100 -8.2 -5.09521 | gap 1, opp_overlap 912804 GGAAGAAACGAAAAA GAAGCTTCCTGAGAT GAC ACCTCAG-AAACTTC TCAGAGACATGAAGG TERM 963 913040 - 913026 - g 70 -10 -3.07895 | opp_overlap 913025 913026 913033 GTTACGGTGAAGATA CCTCCA CGC TGGAGG GTTTCCTGAGTGCGC TRQ2_0883 912413 - 913768 + | glucuronate isomerase TRQ2_0884 913780 - 914226 + | hypothetical protein TERM 964 914256 - 914231 - T 100 -19.1 -3.73088 | opp_overlap 914234, overlap 914234 ACAGTGTATGAAGAA TAACCCCCCGC TCGT GCGGGGGGTTA ATCCATCACTTCACC TERM 965 914234 - 914253 + T 100 -16.4 -3.19389 | opp_overlap 914234 914231 GTGTATGAAGAATAA CCCCCCGC TCGT GCGGGGGG TTAATCCATCACTTC TERM 966 914253 - 914234 - T 100 -16.4 -3.99374 | opp_overlap 914234, overlap 914231 GTGTATGAAGAATAA CCCCCCGC TCGT GCGGGGGG TTAATCCATCACTTC TRQ2_0885 917441 - 914262 - | endo-1,4-beta-xylanase TRQ2_0886 917760 - 918746 + | binding-protein-dependent transport systems inner membrane component TRQ2_0887 918757 - 919863 + | binding-protein-dependent transport systems inner membrane component TRQ2_0888 919877 - 920872 + | oligopeptide/dipeptide ABC transporter, ATPase subunit TRQ2_0889 920869 - 921885 + | oligopeptide/dipeptide ABC transporter, ATPase subunit TRQ2_0890 921899 - 923872 + | extracellular solute-binding protein TERM 967 923906 - 923874 - f 83 -10.6 -3.69341 | gap 1, opp_overlap 923880, overlap 923870 923879 TCGAACAGAAATGAA TCGAA-GCCCCCGGC AATC GCCGGGGGTTTTCAA AACTTTCAGGGAGGG TERM 968 923900 - 923879 - f 91 -12.9 -3.27667 | opp_overlap 923880, overlap 923874 923870 CAGAAATGAATCGAA GCCCCCGGC AATC GCCGGGGGT TTTCAAAACTTTCAG TERM 969 923880 - 923899 + F 100 -16.4 -4.12942 | opp_overlap 923879 923874 923870 AGAAATGAATCGAAG CCCCCGGC AATC GCCGGGGG TTTTCAAAACTTTCA TERM 970 925095 - 925118 + G 70 -2.4 -5.00884 | overlap 925105 AATCACGCAGGAATA CACAGGTCAG CAGA TTCATCTGTG TTTTTTAGGAACCCT TRQ2_0891 923929 - 925953 + | Alpha-glucuronidase TRQ2_0892 926544 - 925954 - | hypothetical protein TERM 971 926076 - 926113 + g 71 -3.5 -4.82901 | gap 2, opp_overlap 926078, overlap 926078 926079 CGACATTGTCAAGAT C-AG-GGACGGTCGTGG TACCTT CCACGGTCGTCCATTCG TTTTTCTCCAAAAGA TERM 972 926078 - 926109 + g 80 -10.1 -3.88001 | opp_overlap 926078, overlap 926076 926079 ACATTGTCAAGATCA GGGACGGTCGTGG TACCTT CCACGGTCGTCCA TTCGTTTTTCTCCAA TERM 973 926079 - 926108 + g 84 -13.6 -2.92077 | opp_overlap 926078, overlap 926078 926076 CATTGTCAAGATCAG GGACGGTCGTGG TACCTT CCACGGTCGTCC ATTCGTTTTTCTCCA TRQ2_0893 927635 - 926541 - | esterase, putative TRQ2_0894 927964 - 927632 - | hypothetical protein TRQ2_0895 929970 - 927961 - | ferrous iron transport protein B TERM 974 928397 - 928422 + gr 72 -3.2 -5.0133 | ACCCAGATAAGAATG GCAGAAACGA ATATGA TCGTTCCGGC TTTTTTCAGAAAGTG TERM 975 929335 - 929347 + gr 83 -6.3 -5.03994 | AGCGAAATACCTCGG GTTGA TTC TCAAC TTTTTATCTCTGAGA TERM 976 929703 - 929719 + gr 77 -7.3 -4.39166 | opp_overlap 929703 CGTCACCTTTCAATA GATAGTC ACG GGCTATC TTTTCGTCTATCGAG TRQ2_0896 930403 - 929939 - | FeoA family protein TRQ2_0897 931289 - 930504 - | hypothetical protein TERM 977 930706 - 930690 - G 80 -9.5 -3.91144 | opp_overlap 930693, overlap 930693 TGGATACTTCACAAA GAACCTT GAA AAGGTTC TGGATAGTCTATCGA TRQ2_0899 931578 - 932795 + | IS605 family transposase OrfB TERM 978 932833 - 932809 - T 83 -10.8 -3.63341 | gap 1 AAGAGCTGCCAAGAA TCCCA-TCCCC TTCA GGGGATTGGGA GTGTCAAAAGAACCT TRQ2_0900 933151 - 932933 - | hypothetical protein TERM 979 933170 - 933193 + r 70 -6.6 -4.11295 | opp_overlap 933174, overlap 933174 CATCACCTCAAAACA AAAAGGGGGC ATAT GCCCCCTTCG TTTCTATGGATTTCA TERM 980 933174 - 933189 + r 89 -11.8 -3.65696 | opp_overlap 933174, overlap 933170 ACCTCAAAACAAAAA GGGGGC ATAT GCCCCC TTCGTTTCTATGGAT TERM 981 933189 - 933174 - R 100 -11.8 -5.46706 | opp_overlap 933170 933174 ACCTCAAAACAAAAA GGGGGC ATAT GCCCCC TTCGTTTCTATGGAT TRQ2_0901 933757 - 933209 - | hypothetical protein TRQ2_0902 933842 - 935581 + | ABC transporter related TRQ2_0903 935594 - 936673 + | peptidase M24 TRQ2_0904 937121 - 936657 - | 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase TRQ2_0905 937942 - 937106 - | dihydropteroate synthase TERM 982 937421 - 937431 + g 83 -4 -5.37043 | CACACCTTTTTCTTT TAGA TAC TCTA TTTTTTCTGTGAAGT TRQ2_0906 938725 - 937946 - | hypothetical protein TERM 983 938687 - 938701 + g 72 -2.8 -4.93365 | CACCTTTTTTAGAGG GACC ATCCTTG GGTC TTTTTCGTTCTGAAC TRQ2_0907 939084 - 938722 - | queuosine biosynthesis protein QueD TERM 984 938781 - 938799 + g 71 -3.7 -4.75356 | CCCACAGTTCTATCT CGTGGAG CCTGA CACCGCG TTTTTCCATCTCTTT TRQ2_0908 940345 - 939095 - | metal dependent phosphohydrolase TRQ2_0909 940866 - 940342 - | hypothetical protein TERM 985 940802 - 940780 - G 95 -12.7 -4.13767 | CTCTTCAGTGTAAAA GCCCCCTGC GTTCT GCAGGAGGC GTGATAGTTTCTTGA TRQ2_0910 942362 - 940863 - | hypothetical protein TERM 986 941045 - 941059 + g 70 -4.9 -4.38712 | opp_overlap 941045 TCTCTATGAAGTTAA CCTCG TAATT CGGGG TTTTGTAAACCTCAC TRQ2_0911 943481 - 942408 - | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein TERM 987 943531 - 943512 - R 100 -13.6 -4.93365 | opp_overlap 943506 943514 943516 TTTGAGAATTAAAAA GAGAGCCC AGCA GGGCTCTC TTGAGGTATATGATT TERM 988 943514 - 943529 + r 73 -10.4 -3.08934 | opp_overlap 943512, overlap 943506 943516 TGAGAATTAAAAAGA GAGCCC AGCA GGGCTC TCTTGAGGTATATGA TRQ2_0912 944822 - 943569 - | phospholipase/carboxylesterase TRQ2_0913 945114 - 946259 + | ROK family protein TRQ2_0914 946290 - 948104 + | extracellular solute-binding protein TERM 989 948111 - 948133 + F 100 -17.7 -3.53012 | GCCATGTGATCTTTC CCCGGCCCC ACTTC GGGGCCGGG TTTCACAAAAACAGA TERM 990 948231 - 948245 + G 74 -8.6 -3.93489 | opp_overlap 948233, overlap 948227 TGCTTGTTACCTACA TAGTGG CAA CCACTA TTGTGTTTATACTTC TRQ2_0915 948167 - 949183 + | binding-protein-dependent transport systems inner membrane component TRQ2_0916 949187 - 950029 + | binding-protein-dependent transport systems inner membrane component TRQ2_0917 950033 - 951025 + | oligopeptide/dipeptide ABC transporter, ATPase subunit TRQ2_0918 951022 - 951828 + | ABC transporter related TRQ2_0919 951828 - 952034 + | hypothetical protein TERM 991 953278 - 953260 - g 72 -6.7 -4.26463 | overlap 953267 ACAGAGGAATATAAA CCCAGAA CCGAC TCCTGGG GAACGGCCATAAAAC TERM 992 953982 - 953962 - g 72 -6.1 -4.33956 | overlap 953964 GGGAAAATAGACAAA CCCTTCCAG GAG CTGAAAGCG TTCCACAAAACAAAA TRQ2_0920 952018 - 954183 + | glycoside hydrolase family 3 protein TRQ2_0921 954196 - 956124 + | glycoside hydrolase family protein TERM 993 956159 - 956125 - f 87 -14.2 -2.71731 | opp_overlap 956129, overlap 956129 956131 GTGAGCCCTCAATGA GACACATCCCCGGTGC TTT GCGCCGGGGGTGTTTC AGAACCATAAAAGGA TERM 994 956155 - 956129 - f 87 -13.6 -3.00298 | opp_overlap 956129, overlap 956125 956131 GCCCTCAATGAGACA CATCCCCGGTGC TTT GCGCCGGGGGTG TTTCAGAACCATAAA TERM 995 956129 - 956155 + F 100 -18 -3.53811 | opp_overlap 956125 956129 956131 GCCCTCAATGAGACA CATCCCCGGTGC TTT GCGCCGGGGGTG TTTCAGAACCATAAA TERM 996 956153 - 956131 - f 73 -10.4 -3.05647 | opp_overlap 956129, overlap 956129 956125 CCTCAATGAGACACA TCCCCGGTGC TTT GCGCCGGGGG TGTTTCAGAACCATA TRQ2_0922 956185 - 958155 + | methyl-accepting chemotaxis sensory transducer TERM 997 958200 - 958178 - f 90 -4.7 -5.50925 | opp_overlap 958181, overlap 958179 958181 AATCAATAGAAAAAA TCAGGCGGG GTTAT CCCGCCTTT TTTTCTGGATGTTAA TERM 998 958199 - 958179 - f 72 -8.2 -3.88115 | opp_overlap 958181, overlap 958178 958181 ATCAATAGAAAAAAT CAGGCGGG GTTAT CCCGCCTT TTTTTCTGGATGTTA TERM 999 958181 - 958197 + F 100 -11.5 -5.65177 | opp_overlap 958179 958178 958181 CAATAGAAAAAATCA GGCGGGG TTA TCCCGCC TTTTTTTCTGGATGT TERM 1000 958197 - 958181 - f 81 -10.8 -3.50491 | opp_overlap 958181, overlap 958179 958178 CAATAGAAAAAATCA GGCGGG GTTAT CCCGCC TTTTTTTCTGGATGT TERM 1001 958304 - 958292 - g 71 -3.3 -4.82901 | GCCTCGTCAGAAAAA TCGCC GCG GGTGA GGTGATTCACAATCC TRQ2_0923 958234 - 959784 + | DNA mismatch repair protein MutL TRQ2_0924 960089 - 959781 - | hypothetical protein TRQ2_0925 960460 - 960086 - | CrcB protein TERM 1002 960341 - 960327 - G 100 -6.4 -6.01187 | AACGAAAGAAAAAAA GAACCC ACA GAGTTC ACGATGATCGTGCCA TRQ2_0926 961236 - 960466 - | short-chain dehydrogenase/reductase SDR TERM 1003 960995 - 961013 + g 73 -4.4 -4.84761 | ACCAGAACGTCTACC CCGCCGTA TAT TTCGACGG TTTTTCTCACCATGT TERM 1004 961254 - 961275 + r 80 -7.1 -4.57755 | opp_overlap 961244 961256, overlap 961255 961256 961273 TAACACCCCACAGAA AAGGCGGGG TAAC CCCCGCCCG TTTTATCTAATCGGT TERM 1005 961255 - 961274 + r 80 -10.6 -3.3393 | opp_overlap 961244 961256, overlap 961254 961256 961273 AACACCCCACAGAAA AGGCGGGG TAAC CCCCGCCC GTTTTATCTAATCGG TERM 1006 961273 - 961256 - R 100 -14.1 -4.54449 | opp_overlap 961255 961254 961256, overlap 961244 ACACCCCACAGAAAA GGCGGGG TAAC CCCCGCC CGTTTTATCTAATCG TERM 1007 961256 - 961273 + r 87 -14.1 -2.59876 | opp_overlap 961244 961256, overlap 961255 961254 ACACCCCACAGAAAA GGCGGGG TAAC CCCCGCC CGTTTTATCTAATCG TRQ2_0927 962252 - 961278 - | thiamine pyrophosphate binding domain-containing protein TRQ2_0928 963445 - 962267 - | pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein TRQ2_0929 963747 - 963448 - | pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit TRQ2_0930 964338 - 963760 - | pyruvate/ketoisovalerate oxidoreductase, gamma subunit TRQ2_0931 965265 - 964429 - | methyl-accepting chemotaxis sensory transducer TERM 1008 964567 - 964588 + g 87 -10.9 -3.90318 | CTTTTCTGAGAGTGA CTCCTTCGA GGTA TCGAGGGAG TTTCTGACCTCCTGA TRQ2_0932 966036 - 965275 - | beta-lactamase domain-containing protein TERM 1009 965806 - 965787 - G 77 -7.2 -4.37534 | gap 1 AAAGCCAGAGCAAAA TCCCGGATG TGA CAT-CGGGA TCCTGATGCGTGTAG TRQ2_0933 966240 - 966728 + | NADH dehydrogenase (ubiquinone) 24 kDa subunit TRQ2_0934 966731 - 967111 + | ferredoxin-like protein TRQ2_0935 967130 - 968953 + | NADH dehydrogenase (quinone) TRQ2_0936 968950 - 969378 + | rubrerythrin TERM 1010 969401 - 969384 - T 89 -14.1 -3.08867 | opp_overlap 969384 GGAAGTGTGAAGATA CCCCGCC GGAC GGCGGGG TTTTTGTTCAAATCA TERM 1011 969384 - 969401 + T 100 -14.1 -5.08601 | opp_overlap 969384 GGAAGTGTGAAGATA CCCCGCC GGAC GGCGGGG TTTTTGTTCAAATCA TRQ2_0937 970088 - 969414 - | cyclase family protein TERM 1012 969841 - 969860 + g 72 -5 -4.58395 | gap 1, overlap 969842 TCCATTGGTTTCTTC TCCCTG-TC CAC GAGCAGGGG TTTTTCAAAAATGAA TRQ2_0938 970122 - 971438 + | transglutaminase domain-containing protein TRQ2_0939 971442 - 972479 + | mandelate racemase/muconate lactonizing protein TERM 1013 973366 - 973346 - g 77 -6.8 -4.39426 | GACAGCTTCACAAAA CCTTCACC GCAGT GGAGAAGG GGGCTCAGCGACAAG TERM 1014 974051 - 974030 - g 71 -7.3 -4.12279 | overlap 974025 974026 GAAAGGCAAAGGAAA GACTCTCCC TCGA GAGAGAATC CATTAGAAGCACAGA TRQ2_0940 972476 - 974428 + | DNA helicase TERM 1015 974474 - 974450 - T 76 -2.8 -5.19328 | gap 1, opp_overlap 974452 974454, overlap 974452 974453 AGTCTATAACAAAAA CATCCCCCCAC TCAT GTGGGGGT-TA TTTTTTTCGTACATT TERM 1016 974452 - 974474 + T 88 -4.1 -5.54894 | gap 1, opp_overlap 974452 974450 974453, overlap 974454 TCTATAACAAAAACA T-CCCCCCAC TCAT GTGGGGGTTA TTTTTTTCGTACATT TERM 1017 974454 - 974471 + T 100 -12.7 -4.8487 | opp_overlap 974453 974452 974450, overlap 974452 TATAACAAAAACATC CCCCCAC TCAT GTGGGGG TTATTTTTTTCGTAC TERM 1018 976918 - 976898 - T 100 -14.7 -4.3623 | ATATCAAAAACCAAA GAGGCGGGA TTG CCCCGCCTC AACCTGAACTCTTCG TRQ2_0941 978471 - 976945 - | 5'-nucleotidase domain-containing protein TERM 1019 977578 - 977602 + g 72 -4.9 -4.70319 | GTATCTGTTTTCGAG GTACGGCTTCC CGA GGTACCTGTAC TTTTCGTTTTCGTAC TERM 1020 978581 - 978593 + G 72 -4.8 -4.67982 | CACGATTCCCGTGAG CGTG ACCGG CACG TTTTGTTCGCTCAAC TERM 1021 979179 - 979156 - g 72 -8.8 -3.53779 | overlap 979157 TGTTCAAAAGAGTAA TCCTCGGCTG TATG CAACCGAGGG GGGAATACAGAAAGA TERM 1022 979178 - 979157 - g 78 -12.3 -2.71785 | overlap 979156 GTTCAAAAGAGTAAT CCTCGGCTG TATG CAACCGAGG GGGGAATACAGAAAG TRQ2_0942 978546 - 979295 + | radical SAM domain-containing protein TRQ2_0943 980043 - 979279 - | phosphodiesterase TERM 1023 979709 - 979731 + g 72 -8.6 -3.70364 | ACTTCGAAACTCAGC TTTTTGGGAA GAT TTCTCAAAAA TTCTCTGGTTTTCTC TRQ2_0944 981472 - 980078 - | glutamyl-tRNA synthetase TERM 1024 980893 - 980881 - G 71 -7.7 -3.85698 | TTGGGGTGTTAGAAA GGTGA TCT TCACC GCGGAACACATGGGA TERM 1025 981523 - 981547 + r 81 -12.8 -2.58812 | opp_overlap 981524 981540, overlap 981519 981540 TAATATATCAAAAAA AGCCCCGGTG ATGAA CACCGGGGCC TGGATTCGGTTTCGA TERM 1026 981546 - 981524 - R 100 -16.3 -5.62219 | opp_overlap 981523 981519 981540, overlap 981540 AATATATCAAAAAAA GCCCCGGTG ATGAA CACCGGGGC CTGGATTCGGTTTCG TRQ2_0945 981769 - 981569 - | cold-shock DNA-binding domain-containing protein TERM 1027 981935 - 981951 + H 76 -3.7 -5.17054 | overlap 981936 TATTTAACTTAATGG GTCTTTC TAT GAAAGAG TTTTTTACCTATTCT TERM 1028 982577 - 982564 - g 83 -6.7 -5.07107 | GAAAGCTGGAAAAAA GCGAT AGAG ATCGC GGGGAGAGTGTTCAA TERM 1029 982903 - 982890 - g 72 -6.7 -4.26079 | GGAAACTATCCAAAA CTTCG AGTA CGAAG TCAGAGTCCTTGGAA TRQ2_0946 982003 - 983169 + | Orn/DAP/Arg decarboxylase 2 TRQ2_0947 983569 - 983171 - | hypothetical protein TRQ2_0948 983860 - 983585 - | hypothetical protein TERM 1030 983808 - 983820 + g 82 -2.6 -5.48028 | TCCAGCCTTTTTTTA GCGG TTTCT CTGC TTTTGTTTTTCTTTC TRQ2_0949 984680 - 983865 - | septum site-determining protein MinD TERM 1031 985350 - 985332 - g 82 -11 -3.59979 | GTGGTGGACGGGAAA CCGCTTCC ACC AGAAGCGG TGAATGCCCTACCAG TERM 1032 986427 - 986407 - g 78 -4.8 -5.05228 | gap 1, overlap 986409 ACGAAATGATAAAAA CATTCGATC TCAT GATCGAA-G TAACCGGATCCAGAG TERM 1033 986426 - 986409 - g 76 -8.5 -4.13732 | overlap 986407 GAAATGATAAAAACA TTCGATC TCAT GATCGAA GTAACCGGATCCAGA TRQ2_0950 984780 - 987164 + | peptidase S16 lon domain-containing protein TERM 1034 987274 - 987287 + GT 74 -6.7 -4.36931 | CATTTCCGCTGTGCT GATCG TACC CGATC TTTTGCTCTACCTTG TRQ2_0952 988861 - 987902 - | L-lactate dehydrogenase TRQ2_0951 987161 - 987976 + | cobalt transport protein TRQ2_0953 988986 - 990098 + | cell envelope-related transcriptional attenuator TRQ2_0954 990103 - 990780 + | deoxyribonuclease V TRQ2_0955 990852 - 991427 + | hypothetical protein TERM 1035 991504 - 991518 + G 76 -8.6 -4.08767 | CAACGAAGTGAGGCC CGTTCT CGA AGAACG TTTTGGACCCATGGA TERM 1036 991919 - 991897 - g 74 -3.3 -4.9934 | AGAAGAGTACAAAAA GCACCTTGA AAAGA TCAGGGAGC TGTACCTCAAAAAGA TRQ2_0956 991415 - 991954 + | hypothetical protein TERM 1037 992237 - 992225 - g 74 -3.3 -5.05153 | AGCTGAAAAAAGAAA TCCCC GAG GTGGA TCAGTGGATAGGTGT TERM 1038 992794 - 992783 - g 86 -4.4 -5.46629 | AAGAGTTGAAAAAAA TGCT TTCG AGCA TCAGAGAGAGGTTCC TRQ2_0957 991951 - 993243 + | MiaB-like tRNA modifying enzyme YliG TRQ2_0958 993240 - 993761 + | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase TRQ2_0959 993765 - 994328 + | 2'-5' RNA ligase TERM 1039 994430 - 994403 - gf 74 -9.9 -3.30635 | GAAAGGGTTCCATAA TGATCCTGGGT GATGAA ACCCAGGTTCA GCCTGTAGAGGTGAT TRQ2_0960 994321 - 995391 + | recA protein TERM 1040 995381 - 995368 - gf 78 -5.3 -4.98352 | AGGAAAGAAAAGAAA TCTTC AGGC GAAGA AGCCTCTTAATTATG TRQ2_0961 995321 - 995806 + | regulatory protein RecX TERM 1041 996868 - 996856 - g 70 -9.1 -3.31869 | overlap 996851 996854 GACAAAGCGAGAAGA GGAGG ACT CCTCC ACGATATAGGAAAAG TRQ2_0962 995806 - 997329 + | RNA binding metal dependent phosphohydrolase TERM 1042 997355 - 997370 + F 100 -11.8 -5.49579 | opp_overlap 997349 ATGGAAAACCTTCAA GCCCCC ATCA GGGGGC TTTTGTTTTTTGTGA TRQ2_0964 997945 - 998835 + | glycosidase PH1107-related TERM 1043 999490 - 999453 - g 71 -3.4 -4.83269 | gap 1, overlap 999481 AGATGAGATCAAAAA CACCTG-GAACACACCG GAGTT CAAAGAGTTCACAGGTG TGAAGCTTTCTGAAG TRQ2_0965 998851 - 1001883 + | glycoside hydrolase family protein TERM 1044 1001905 - 1001926 + F 100 -13 -3.73953 | AAACTTGTCACTCGA GAGCGGGG ATGGCA CCCCGCTC TTTGATCAACCTAAT TERM 1045 1002240 - 1002219 - g 91 -8.7 -4.98461 | overlap 1002210 1002220 AAAGAAGAAAAGAAA GTCTCCTCC AGAA GGAGGAGAA GAGAGAAAGAAACAG TERM 1046 1002239 - 1002220 - g 88 -12.2 -3.55416 | overlap 1002210 1002219 AAGAAGAAAAGAAAG TCTCCTCC AGAA GGAGGAGA AGAGAGAAAGAAACA TRQ2_0966 1002087 - 1002266 + | hypothetical protein TRQ2_0967 1003273 - 1002347 - | hypothetical protein TRQ2_0968 1003581 - 1006022 + | glycosyltransferase 36 TERM 1047 1006053 - 1006070 + F 100 -12.7 -5.60993 | opp_overlap 1006052 1006055 TGATATAGTACAGAC GAGGGGG TACT CCCCCTC TTTTTTTGTGCAGAG TRQ2_0969 1006135 - 1007475 + | beta-galactosidase TERM 1048 1007495 - 1007479 - f 100 -15.1 -4.28254 | opp_overlap 1007479 CTGGAAGACTGAAAA GGGCGGC CTG GCCGCCC TTTCTTTTTGATGTA TERM 1049 1007479 - 1007495 + F 100 -15.1 -4.94262 | opp_overlap 1007479 CTGGAAGACTGAAAA GGGCGGC CTG GCCGCCC TTTCTTTTTGATGTA TRQ2_0970 1007693 - 1008928 + | extracellular solute-binding protein TERM 1050 1008925 - 1008961 + F 100 -16 -3.06696 | gap 1, opp_overlap 1008929 1008931, overlap 1008931 ATTCCTGCTTGGACA GTAACAGAGGCGAGGGG CTCT CCCC-CGCCTCTTTTAC TCTGTTGAAGGAGGA TERM 1051 1008957 - 1008929 - f 86 -12.4 -3.25823 | opp_overlap 1008925 1008931, overlap 1008931 CTGCTTGGACAGTAA CAGAGGCGAGGG GCTCT CCCCCGCCTCTT TTACTCTGTTGAAGG TERM 1052 1008931 - 1008955 + F 100 -13.6 -4.43213 | gap 1, opp_overlap 1008931 1008929, overlap 1008925 GCTTGGACAGTAACA GAGGCGAGGGG CTCT CCCC-CGCCTC TTTTACTCTGTTGAA TERM 1053 1008955 - 1008931 - f 95 -15 -3.19602 | opp_overlap 1008925 1008931, overlap 1008929 GCTTGGACAGTAACA GAGGCGAGGG GCTCT CCCCCGCCTC TTTTACTCTGTTGAA TERM 1054 1009213 - 1009195 - g 74 -6 -4.57341 | opp_overlap 1009194 1009195 1009197 AATGGCTTTGAAAAA CACCGT CTTTTTC ACGGTG ATTTCGGTTTCTCTG TRQ2_0971 1008986 - 1009867 + | binding-protein-dependent transport systems inner membrane component TRQ2_0972 1009880 - 1010716 + | binding-protein-dependent transport systems inner membrane component TERM 1055 1010894 - 1010914 + F 80 -5.5 -5.07567 | TAATACCTTGCGTTT CGTTTTTTT GAA GAAAAAGCG TTTTTTCGGATATGA TRQ2_0973 1010981 - 1012012 + | periplasmic binding protein/LacI transcriptional regulator TERM 1056 1012055 - 1012036 - f 79 -9.2 -3.94404 | opp_overlap 1012038, overlap 1012038 AATCATTGAAGTAAA GAGGGGGG TTCA CCCCCCTT CTTTATGGAAGGAGA TERM 1057 1012038 - 1012053 + F 93 -11.8 -4.06419 | opp_overlap 1012036 1012038 TCATTGAAGTAAAGA GGGGGG TTCA CCCCCC TTCTTTATGGAAGGA TERM 1058 1012053 - 1012038 - f 88 -11.8 -3.55604 | opp_overlap 1012038, overlap 1012036 TCATTGAAGTAAAGA GGGGGG TTCA CCCCCC TTCTTTATGGAAGGA TRQ2_0974 1012105 - 1013046 + | monosaccharide-transporting ATPase TERM 1059 1014134 - 1014122 - g 75 -6.3 -4.38927 | opp_overlap 1014121 TCTTGATAGAATAAA GAAAG GGC CTTTC ATATCGTTTAAAAGA TRQ2_0975 1013043 - 1014530 + | ABC transporter related TERM 1060 1014680 - 1014660 - g 75 -3.1 -5.26316 | TGATCTCAGAAAAAA CAGGGCTCG ATC CCAGCACCG TCACAAAACTCGTGA TERM 1061 1014700 - 1014689 - g 72 -5.8 -4.3898 | AGCACCGTCACAAAA CTCG TGAA CGAG ATGAAGAGAAAGAAG TERM 1062 1015368 - 1015352 - g 81 -5.1 -5.1166 | overlap 1015345 TACGAAAAGGAAAAA GCCCTTC CTG GAAAGAC CATGTACGAGAAATT TRQ2_0976 1014545 - 1015693 + | ROK family protein TERM 1063 1015695 - 1015717 + T 80 -9.1 -4.07885 | opp_overlap 1015696, overlap 1015696 AAAGACTAGTGTAAA ATGAGGGGG ATTTC CCCCCTCAC TTTTCCAAGAGGATC TERM 1064 1015716 - 1015696 - T 100 -13.3 -4.16681 | opp_overlap 1015695 1015696 AAGACTAGTGTAAAA TGAGGGGGA TTT CCCCCCTCA CTTTTCCAAGAGGAT TERM 1065 1015696 - 1015716 + T 83 -12.6 -3.04517 | opp_overlap 1015696, overlap 1015695 AAGACTAGTGTAAAA TGAGGGGG ATTTC CCCCCTCA CTTTTCCAAGAGGAT TRQ2_0977 1017456 - 1015714 - | WD-40 repeat-containing protein TERM 1066 1017505 - 1017486 - R 100 -15 -3.6215 | opp_overlap 1017486 GGAATGGATTTCAAA GCCCCAGC TCAC GCTGGGGC TTTACCATTGAAATT TERM 1067 1017486 - 1017505 + r 100 -15 -3.66921 | opp_overlap 1017486 GGAATGGATTTCAAA GCCCCAGC TCAC GCTGGGGC TTTACCATTGAAATT TRQ2_0978 1020062 - 1017531 - | pullulanase, type I TERM 1068 1018005 - 1018026 + g 71 -3.7 -4.82333 | gap 1, opp_overlap 1018005 AGAAGTGAGGAGAAT CGCACCAG CCAGTTT CTGG-GCG TTTTTCAGTTCTTCT TRQ2_0979 1022104 - 1020080 - | glycoside hydrolase family 13 protein TERM 1069 1022016 - 1022026 + g 72 -5.4 -4.4595 | overlap 1022018 CCTTCCCACTCGAAG GTGA AAA TCAC TTTTCCGTTTTCTAC TRQ2_0980 1023262 - 1022120 - | hypothetical protein TRQ2_0981 1023926 - 1023273 - | hypothetical protein TERM 1070 1023786 - 1023758 - G 88 -12.5 -3.56576 | opp_overlap 1023755 1023754, overlap 1023754 AAACGGAAGAAGGAA GCTCCAGGGTG TAGAAAT CACCCTGAAGC GCCATTTTGTATTCG TRQ2_0982 1025271 - 1023940 - | hypothetical protein TRQ2_0983 1026951 - 1025284 - | alpha amylase catalytic region TERM 1071 1025994 - 1026004 + g 74 -5.4 -4.614 | ACAGGAAAGACTCCT CAAC CCA GTTG TTTTCTATCATTCCA TRQ2_0984 1027213 - 1028391 + | extracellular solute-binding protein TERM 1072 1028419 - 1028438 + F 100 -13.6 -4.14392 | opp_overlap 1028419, overlap 1028435 TCATTAGTCAAAGAA GAGGGGGA CTTT TCCCCCTC TTTTAAAAATTCAGG TERM 1073 1028438 - 1028419 - f 100 -13.6 -3.97674 | opp_overlap 1028419 1028435 TCATTAGTCAAAGAA GAGGGGGA CTTT TCCCCCTC TTTTAAAAATTCAGG TERM 1074 1028857 - 1028868 + G 76 -4.4 -4.99312 | GTTCGATGGTCTGAA TCCT ACCG AGGA TTTTGTTGTTCTCTT TERM 1075 1029617 - 1029627 + G 71 -6.8 -4.11275 | CTCATTATTCCATGG GCTG TGC CAGC TTTCATTTCCGTTCT TRQ2_0985 1028468 - 1030201 + | binding-protein-dependent transport systems inner membrane component TRQ2_0986 1030198 - 1032699 + | binding-protein-dependent transport systems inner membrane component TERM 1076 1032850 - 1032834 - g 73 -7.9 -4.1399 | overlap 1032835 GGAGTCATAGAGAAA TGGGGAG TTC CTCCCCG CAAACTTCCCGGTGC TERM 1077 1032849 - 1032835 - g 75 -11.4 -3.07912 | overlap 1032834 GAGTCATAGAGAAAT GGGGAG TTC CTCCCC GCAAACTTCCCGGTG TERM 1078 1033910 - 1033898 - g 73 -7.7 -4.08216 | TCATCCTCTTCAAAA CACCA TCG TGGTG GTGAACCCAGGAGAA TRQ2_0987 1032696 - 1034117 + | alpha amylase catalytic region TERM 1079 1034138 - 1034156 + F 100 -12.4 -4.86862 | overlap 1034136 1034154 TTCATTGAAGATTCC GGCTGGCT TCC GGCCAGCC TTTTAATTTTTTAAG TRQ2_0988 1034252 - 1035694 + | glycoside hydrolase family protein TERM 1080 1035723 - 1035707 - f 100 -13.7 -3.65353 | opp_overlap 1035707 TGAAAGGATCTGAAA GGGGCCT GAA AGGCCCC TTTATGTATAATATA TERM 1081 1035707 - 1035723 + F 100 -13.7 -4.16301 | opp_overlap 1035707 TGAAAGGATCTGAAA GGGGCCT GAA AGGCCCC TTTATGTATAATATA TERM 1082 1036399 - 1036422 + G 79 -7.4 -4.39277 | opp_overlap 1036399, overlap 1036396 1036391 1036400 ACCCCAACCACGCAA GCTATTCCCC TTCA GGGGGATAGG TTTGTTGTGGTGTTA TERM 1083 1036400 - 1036421 + G 77 -10.9 -3.22482 | opp_overlap 1036399, overlap 1036399 1036396 1036391 CCCCAACCACGCAAG CTATTCCCC TTCA GGGGGATAG GTTTGTTGTGGTGTT TRQ2_0989 1035845 - 1036438 + | hypothetical protein TRQ2_0990 1036473 - 1036862 + | transposase IS200-family protein TERM 1084 1037584 - 1037568 - g 80 -6.5 -4.88918 | overlap 1037571 TTAGTGCAAAGAAAA GAGCCCT GAG ACGGCTC AGAAACCAGATCAAC TRQ2_0991 1036847 - 1038055 + | IS605 family transposase OrfB TERM 1085 1038093 - 1038069 - f 85 -10.8 -3.74361 | gap 1 GAGAGCCACCAAGAA TCCCA-TCCCC TTCA GGGGATTGGGA GGAGGTCAAGTGATT TRQ2_0992 1038103 - 1038357 + | diguanylate cyclase TERM 1086 1038561 - 1038578 + F 100 -12.7 -5.07652 | opp_overlap 1038560 ATGTGGAGATTATAT GGGACCC GAGA GGGTCCC TTTTCTTTTACACAG TRQ2_0993 1038606 - 1039652 + | riboflavin biosynthesis protein RibD TRQ2_0994 1039637 - 1040209 + | riboflavin synthase, alpha subunit TERM 1087 1040408 - 1040441 + G 72 -10.3 -2.76261 | opp_overlap 1040396 1040408, overlap 1040407 CTACGGAGCGAACTA CTTCGTGCCGGTG GACTGGGG CACTGGCACGGGG ATTTCAGCGTTGGAG TERM 1088 1041318 - 1041305 - g 79 -4.5 -5.2197 | GACAAAAATGAAAAA GCTCG GACA CGAAC TCGAAGAAATCTTCA TRQ2_0995 1040184 - 1041350 + | GTP cyclohydrolase II TRQ2_0996 1041347 - 1041844 + | 6,7-dimethyl-8-ribityllumazine synthase TRQ2_0997 1041819 - 1042628 + | hypothetical protein TERM 1089 1042613 - 1042656 + T 95 -13.4 -3.41569 | opp_overlap 1042621 1042622, overlap 1042614 1042621 CAGCGTGAGTAACTT TCTGAAAATGAAGTGAGGGA ACTC TCCCTTACTTCGTTTTGAGG TATTTCAGTGCATCG TERM 1090 1042614 - 1042655 + T 89 -14.7 -2.6462 | opp_overlap 1042621 1042622, overlap 1042613 1042621 AGCGTGAGTAACTTT CTGAAAATGAAGTGAGGGA ACTC TCCCTTACTTCGTTTTGAG GTATTTCAGTGCATC TERM 1091 1042648 - 1042621 - T 70 -7 -4.09739 | opp_overlap 1042614 1042613 1042621, overlap 1042622 GTAACTTTCTGAAAA TGAAGTGAGGGA ACTC TCCCTTACTTCG TTTTGAGGTATTTCA TERM 1092 1042621 - 1042648 + T 93 -11.4 -4.21827 | opp_overlap 1042621 1042622, overlap 1042614 1042613 GTAACTTTCTGAAAA TGAAGTGAGGGA ACTC TCCCTTACTTCG TTTTGAGGTATTTCA TERM 1093 1042647 - 1042622 - T 73 -10.5 -3.05522 | opp_overlap 1042621 1042614 1042613, overlap 1042621 TAACTTTCTGAAAAT GAAGTGAGGGA ACTC TCCCTTACTTC GTTTTGAGGTATTTC TRQ2_0998 1043492 - 1042641 - | HflC protein TERM 1094 1043151 - 1043183 + g 77 -6.9 -4.386 | opp_overlap 1043161, overlap 1043155 1043159 AACCACATCGTCGAT TCTTGGAAGAGCGAG CTT CACGCTCTTCAGTGA TTTTATGAACGCTTC TRQ2_0999 1044415 - 1043489 - | HflK protein TRQ2_1000 1045050 - 1044427 - | DNA-(apurinic or apyrimidinic site) lyase TERM 1095 1044932 - 1044950 + g 86 -11.8 -3.53444 | opp_overlap 1044928, overlap 1044928 CAGAAAGAGAGTTCA CAGAAGAG ATC CTCTTCTG TTCCTTCTTCGCCCA TERM 1096 1044985 - 1045002 + g 78 -6.3 -4.59414 | gap 1 TTTGAACTCTTCGAA CCGCT-GT TCA ACGAGCGG TTTTGCTTCTTCTCG TRQ2_1001 1046560 - 1045055 - | GMP synthase, large subunit TERM 1097 1045929 - 1045939 + g 91 -6.8 -5.49234 | opp_overlap 1045928 ACCCCTCCAGAAAGC GCGA GGA TCGC TTTTTTGTTCCCTAT TERM 1098 1046245 - 1046265 + g 72 -8.2 -3.69395 | CTTCGAATATCGGAT CCCTCGAG AGCTC CACGAGGG TTCTTCCGTACTCCC TERM 1099 1046679 - 1046694 + G 82 -7.6 -4.65078 | GGATCGAATTTGATT GGAAGA CTGT TCTTCC TTTTCTTGAGGATCT TRQ2_1002 1046673 - 1047188 + | chromate transporter TERM 1100 1047216 - 1047226 + G 75 -3.2 -5.26247 | overlap 1047205 1047197 CTCGCCTTCATCTTT CTGA AGG TCGG TTTTCTTTCTTTTGG TRQ2_1003 1047192 - 1047692 + | chromate transporter TERM 1101 1048128 - 1048116 - g 83 -9.1 -4.27297 | AAGAGAACAGATAAA GGCTC TTG GAGCC TCGGTGGACTGGACA TRQ2_1004 1047724 - 1050321 + | valyl-tRNA synthetase TERM 1102 1050326 - 1050343 + T 100 -12.7 -4.89063 | opp_overlap 1050326 ATCTAGAATGAAAAA GAGGGGC CAAA GCCCCTC TTTGTTTTTCAGTGA TERM 1103 1050343 - 1050326 - T 100 -12.7 -4.93968 | opp_overlap 1050326 ATCTAGAATGAAAAA GAGGGGC CAAA GCCCCTC TTTGTTTTTCAGTGA TRQ2_1005 1050726 - 1050352 - | dinitrogenase iron-molybdenum cofactor biosynthesis protein TRQ2_1006 1051160 - 1050741 - | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein TERM 1104 1051410 - 1051397 - H 70 -2.5 -4.9138 | opp_overlap 1051397, overlap 1051392 AGTATGCAAAGAAAA TTTTA ATGA TAAAA TTATCACAAAGACAT TERM 1105 1051946 - 1051936 - g 79 -4 -5.24531 | AGTTTTCAGAAAAAA TCTT ATG AAGA AGTACAGAGCTTTTT TRQ2_1007 1051442 - 1052194 + | CRISPR-associated Cas family protein TERM 1106 1052860 - 1052847 - g 72 -3.1 -5.07107 | opp_overlap 1052847 CAAAGTTCGAAAAAA CCAAA GCTA CTTGG TTCTATGTCTCAAAA TRQ2_1008 1052199 - 1053845 + | hypothetical protein TERM 1107 1054060 - 1054050 - g 83 -4 -5.40474 | ATCTTCTGAAAAAAA GTTT GGA AAAC GAAAAGGTTTGGTAC TERM 1108 1054932 - 1054922 - g 76 -4 -4.99947 | TTGAACGAAAGAAAA TACA GAA TGTA CACAGAAAAAGACCT TRQ2_1009 1053866 - 1056019 + | CRISPR-associated Csm1 family protein TRQ2_1010 1056034 - 1056456 + | CRISPR-associated Csm2 family protein TRQ2_1011 1056470 - 1057213 + | CRISPR-associated RAMP Csm3 family protein TERM 1109 1057259 - 1057300 + G 70 -10.2 -2.53876 | gap 2 TCAGAAGTGGTTTCA GGGTGGGTAGGG-GGAA-CG AGAC CGATTCCACCCTCCCCACCA TCCATTCCGATACCA TRQ2_1012 1057231 - 1058088 + | CRISPR-associated RAMP Csm4 family protein TERM 1110 1058368 - 1058354 - gf 73 -4.2 -4.88293 | overlap 1058350 AAGTGGAAAAAGAAA TCCGGA GAT TCCTGA AGTTGTTCACCATCC TRQ2_1013 1058085 - 1059224 + | CRISPR-associated RAMP Csm5 family protein TERM 1111 1059500 - 1059481 - gT 72 -9.4 -3.25204 | overlap 1059479 CTACGTCGAAATATA CGAAAAGA GAGA TCTTTTCG ACTCACCCGGGGTGT TRQ2_1014 1059197 - 1059772 + | hypothetical protein TRQ2_1015 1060569 - 1059754 - | hypothetical protein TERM 1112 1059973 - 1059985 + g 85 -3.3 -5.5208 | GTATTTCTTGACGAG CGGGT TGA ACACG TTTTTTCTCTTATCC TRQ2_1016 1061039 - 1060569 - | hypothetical protein TRQ2_1017 1061380 - 1061030 - | heat shock protein DnaJ domain-containing protein TERM 1113 1065754 - 1065780 + GH 70 -2.3 -4.93454 | gap 1 TCTCGAAGCTGGAAA CTGGTCAGCATC GCCC GATGA-GATCAG TTTTGTCTTTGTTTC TRQ2_1018 1064228 - 1065865 + | CRISPR-associated Csh1 family protein TRQ2_1019 1065840 - 1066739 + | CRISPR-associated Csh2 family protein TRQ2_1020 1066742 - 1067404 + | CRISPR-associated Cas5 family Hmari subtype protein TERM 1114 1067538 - 1067522 - g 72 -8.1 -3.81951 | opp_overlap 1067521 1067522, overlap 1067525 TCGGATACGATGAAA GAATTCT GGA AGAATTC GTTTCTCTACTCTCT TERM 1115 1069071 - 1069108 + G 70 -10 -3.02511 | overlap 1069067 CCTCTTTTCTTCTTA CGTTTACGGAAGTTTC CTCACA GAGACTTCCATGAACG TATTGAAGAACTACA TRQ2_1021 1067395 - 1069560 + | CRISPR-associated HD domain-containing protein TERM 1116 1069810 - 1069790 - g 78 -6.1 -4.56775 | opp_overlap 1069791, overlap 1069791 ATCCGCTTCGAAAAA GGGAGCTGA GTA TCAACTCCT TTACTACCTTTACAG TERM 1117 1069809 - 1069791 - g 73 -9.6 -3.33744 | opp_overlap 1069791, overlap 1069790 TCCGCTTCGAAAAAG GGAGCTGA GTA TCAACTCC TTTACTACCTTTACA TRQ2_1022 1069557 - 1070036 + | CRISPR-associated Cas4 family protein TERM 1118 1070808 - 1070795 - g 70 -5.3 -4.42062 | overlap 1070804 CACTCGTCAAATAAA CGAAA GGCA TTTCG ATGAAATCTCAGAGG TRQ2_1023 1070046 - 1071005 + | CRISPR-associated Cas1 family protein TRQ2_1024 1071019 - 1071282 + | CRISPR-associated Cas2 family protein TERM 1119 1072265 - 1072310 + G 73 -9.9 -3.36273 | opp_overlap 1072265 1072292, overlap 1072279 TATCAGAGATTGAAA GGTTTCGAGGACAAGAGAGTG GCAA TATTCTCTTCTCTTCAAAACC TTGATCTTGAGGAAA TRQ2_1025 1071296 - 1072573 + | CRISPR-associated RAMP Cmr1 family protein TERM 1120 1073732 - 1073722 - g 71 -6.8 -4.13767 | CTTCTGACCTCAAAA CTCG CTG CGAG AAAGATGGCCAGACT TERM 1121 1073844 - 1073827 - g 85 -5.5 -5.27335 | opp_overlap 1073837, overlap 1073829 TTCTTGAAAGAAAAA GAGGAAG AGCT CTTCCAC GACGCGGACGATTTC TERM 1122 1073842 - 1073829 - g 72 -6.7 -4.27026 | opp_overlap 1073837, overlap 1073827 CTTGAAAGAAAAAGA GGAAG AGCT CTTCC ACGACGCGGACGATT TRQ2_1026 1072576 - 1075014 + | CRISPR-associated RAMP Crm2 family protein TRQ2_1027 1075011 - 1076003 + | CRISPR-associated Cmr3 family protein TERM 1123 1076021 - 1076039 + G 86 -11.8 -3.53224 | opp_overlap 1076016 1076024, overlap 1076024 AGGGATAGAAGGATG GAAGGAAG AGT CTTCCTTC TTTACGCGGAAACTC TERM 1124 1076024 - 1076036 + G 71 -7.7 -3.90744 | opp_overlap 1076024 1076016, overlap 1076021 GATAGAAGGATGGAA GGAAG AGT CTTCC TTCTTTACGCGGAAA TRQ2_1028 1076018 - 1076896 + | CRISPR-associated RAMP Cmr4 family protein family protein TERM 1125 1077108 - 1077069 - g 100 -8 -5.48163 | gap 1, overlap 1077072 1077105 AAAGAAAGGAAAAAA CAAGGTGGTGGATCACCTT GGA AAGATGATCGAACACC-TG ACACTGGAAGATAGT TERM 1126 1077106 - 1077072 - g 100 -10.8 -4.76088 | overlap 1077069 1077105 GAAAGGAAAAAACAA GGTGGTGGATCACCTT GGA AAGATGATCGAACACC TGACACTGGAAGATA TRQ2_1029 1076902 - 1077264 + | CRISPR-associated Cmr5 family protein TRQ2_1030 1077251 - 1077979 + | CRISPR-associated RAMP Cmr6 family protein TERM 1127 1078015 - 1078033 + F 95 -7.3 -5.45652 | opp_overlap 1078016, overlap 1078016 AAAAAACGTCAGTGA ACCCCGC ATCAA GCGGGGC TTTTTTCTTACACAT TERM 1128 1078032 - 1078016 - f 76 -10.8 -3.10082 | opp_overlap 1078016 1078015 AAAAACGTCAGTGAA CCCCGC ATCAA GCGGGG CTTTTTTCTTACACA TERM 1129 1078016 - 1078032 + F 86 -10.8 -3.86307 | opp_overlap 1078016, overlap 1078015 AAAAACGTCAGTGAA CCCCGC ATCAA GCGGGG CTTTTTTCTTACACA TRQ2_1031 1078345 - 1078650 + | hypothetical protein TERM 1130 1078700 - 1078724 + F 83 -10.8 -3.63341 | gap 1 ATTATTTGTTGACAC TCCCGATCCCC TAAA GGGGAT-GGGA TTCTTGGCAGCTCTT TERM 1131 1078805 - 1078780 - f 82 -12.7 -2.82516 | gap 1, overlap 1078782 1078796 CGCTCCATGACCACA GAGGTGTG-GGT TAA ACCTCACACCTC TGGCGGGTGCCAAGC TERM 1132 1078803 - 1078782 - f 70 -9.5 -2.96216 | gap 1, overlap 1078780 1078796 CTCCATGACCACAGA GGTGTG-GGT TAA ACCTCACACC TCTGGCGGGTGCCAA TERM 1133 1079556 - 1079581 + F 85 -11.9 -3.28497 | opp_overlap 1079555 1079554 TGGGGATTATAAATG GCTCTCGATTG CGTC CCATCGAGAGC TTGACTTTCCCATCC TERM 1134 1080283 - 1080303 + G 89 -6.1 -5.38326 | opp_overlap 1080281, overlap 1080274 1080271 1080271 1080274 1080286 TCCGAGGGGAAAGTC CCTCCCTTT TTC AAAGAGGGG TTTTTCTTTACTTCA TERM 1135 1080429 - 1080442 + G 72 -6.7 -4.32402 | TCTAAAAAGGCCTTT GAGCA AAGA TGCTC TTCTTTTGATTCAGA TERM 1136 1080608 - 1080625 + G 72 -2.7 -4.91459 | TAGCAAAGCGTGAGG GAAAGAA GGTA TTCGTTC TTTTTATGGATCTTG TRQ2_1034 1080154 - 1081005 + | diguanylate cyclase TERM 1137 1081672 - 1081642 - g 89 -4.7 -5.72207 | opp_overlap 1081647, overlap 1081647 GGTAAATCAAAAAAA GAAAAGGGATGTC TCTTC GACATCCCTTCAA TCATGGCGCCCCCAA TERM 1138 1081647 - 1081667 + G 75 -11.2 -3.09516 | opp_overlap 1081642 1081647 ATCAAAAAAAGAAAA GGGATGTC TCTTC GACATCCC TTCAATCATGGCGCC TERM 1139 1081667 - 1081647 - g 100 -11.2 -5.57888 | opp_overlap 1081647, overlap 1081642 ATCAAAAAAAGAAAA GGGATGTC TCTTC GACATCCC TTCAATCATGGCGCC TRQ2_1035 1081081 - 1081716 + | hypothetical protein TERM 1140 1081984 - 1081959 - T 90 -8.9 -4.65895 | opp_overlap 1081955 1081962 1081963, overlap 1081963 GTGTTCATCCAAAAA TCAAGGGGGCC ACGA GGCCCCCGTTA TCTCTTTACTGTTTC TERM 1141 1081962 - 1081981 + T 85 -10.6 -3.79021 | opp_overlap 1081959 1081963, overlap 1081955 1081963 TTCATCCAAAAATCA AGGGGGCC ACGA GGCCCCCG TTATCTCTTTACTGT TERM 1142 1081980 - 1081963 - T 100 -14.1 -3.83042 | opp_overlap 1081963 1081962 1081955, overlap 1081959 TCATCCAAAAATCAA GGGGGCC ACGA GGCCCCC GTTATCTCTTTACTG TERM 1143 1081963 - 1081980 + T 89 -14.1 -2.86328 | opp_overlap 1081959 1081963, overlap 1081962 1081955 TCATCCAAAAATCAA GGGGGCC ACGA GGCCCCC GTTATCTCTTTACTG TRQ2_1036 1082307 - 1081990 - | hypothetical protein TERM 1144 1082731 - 1082710 - H 72 -5.9 -4.58308 | opp_overlap 1082710 GAGCAAGTAAATAAA CATATGATC ATCT GTTCATATG TTATATCCTCCCGTG TRQ2_1038 1082909 - 1083730 + | hypothetical protein TERM 1145 1083867 - 1083844 - g 77 -3.8 -5.14477 | TACAGATGCAAAAAA TGTGGAGCAA TCTA CTACTCCGCA ACGTCCATTGAATAT TRQ2_1039 1083817 - 1083999 + | hypothetical protein TERM 1146 1084019 - 1083997 - T 100 -7.6 -5.80727 | opp_overlap 1084000, overlap 1083998 1084000 AAAAAGAAGAAAAAA TGAGGGAGGC TTT GCCTCCCTTT CAAATTTCTCTCAGG TERM 1147 1084018 - 1083998 - T 86 -11.1 -4.02946 | opp_overlap 1084000, overlap 1083997 1084000 AAAAGAAGAAAAAAT GAGGGAGGC TTT GCCTCCCTT TCAAATTTCTCTCAG TERM 1148 1084000 - 1084016 + T 100 -13.7 -3.75418 | opp_overlap 1084000 1083998 1083997 AAGAAGAAAAAATGA GGGAGGC TTT GCCTCCC TTTCAAATTTCTCTC TERM 1149 1084016 - 1084000 - T 100 -13.7 -3.54636 | opp_overlap 1084000, overlap 1083998 1083997 AAGAAGAAAAAATGA GGGAGGC TTT GCCTCCC TTTCAAATTTCTCTC TRQ2_1040 1085176 - 1084019 - | acetylornithine and succinylornithine aminotransferase TRQ2_1041 1086027 - 1085179 - | acetylglutamate kinase TRQ2_1042 1087217 - 1086024 - | arginine biosynthesis bifunctional protein ArgJ TERM 1150 1086932 - 1086946 + g 73 -2.1 -5.26316 | gap 1 TTTCAACGGGAACAC CGAGCT CTTC AGC-CG TTTTTTCTGCCATCC TERM 1151 1087143 - 1087154 + g 76 -2.2 -5.40873 | CACCTCGGAGAAGAT GATC CCAA GGTC TTTTCTTTTTCTCTT TRQ2_1043 1088253 - 1087234 - | N-acetyl-gamma-glutamyl-phosphate reductase TERM 1152 1087342 - 1087363 + g 80 -7.3 -4.67968 | overlap 1087344 CACGAGGTTGTCTAT TGCGCTCAT CAGT ATGAGCGTG TTTGTTCTTTCTTCC TERM 1153 1087344 - 1087361 + g 80 -9.9 -3.92799 | overlap 1087342 CGAGGTTGTCTATTG CGCTCAT CAGT ATGAGCG TGTTTGTTCTTTCTT TERM 1154 1087574 - 1087590 + g 75 -6.6 -4.41616 | opp_overlap 1087571, overlap 1087573 GGGACGAGATGAGGC GTGAAC ACCAC GTTCAC TTTCTTTCCCGAGAT TRQ2_1044 1089446 - 1088250 - | argininosuccinate lyase TRQ2_1045 1090672 - 1089443 - | argininosuccinate synthase TERM 1155 1091056 - 1091090 + H 95 -14.4 -3.21218 | opp_overlap 1091038 1091061 1091063, overlap 1091057 1091063 CACCCTCTCCGCCAG AGAAAGACCGGGACTT TTC AGGTCCCGGTTTTTCA TTCATCATACGGGGT TERM 1156 1091057 - 1091089 + H 100 -17.9 -2.52516 | opp_overlap 1091038 1091061 1091063, overlap 1091056 1091063 ACCCTCTCCGCCAGA GAAAGACCGGGACTT TTC AGGTCCCGGTTTTTC ATTCATCATACGGGG TERM 1157 1091085 - 1091061 - H 78 -8.5 -4.03234 | opp_overlap 1091057 1091056 1091063, overlap 1091038 1091063 TCTCCGCCAGAGAAA GACCGGGACTT TTC AGGTCCCGGTT TTTCATTCATCATAC TERM 1158 1091063 - 1091083 + H 100 -13.3 -4.90869 | opp_overlap 1091038 1091063 1091061, overlap 1091057 1091056 TCCGCCAGAGAAAGA CCGGGACTT TTC AGGTCCCGG TTTTTCATTCATCAT TERM 1159 1091083 - 1091063 - H 83 -11.1 -3.61232 | opp_overlap 1091057 1091056 1091063, overlap 1091038 1091061 TCCGCCAGAGAAAGA CCGGGACTT TTC AGGTCCCGG TTTTTCATTCATCAT TERM 1160 1091536 - 1091526 - g 74 -5.4 -4.59293 | GAAATACGAAATAAA CATC GAT GATG TGAAGAGAGCGAATC TRQ2_1046 1091116 - 1091568 + | hypothetical protein TERM 1161 1091681 - 1091668 - g 84 -8.1 -4.58395 | CCTATCCTCGAAAAA GCGCT GGTG AGCGC CTACAGGAAGAACTT TRQ2_1047 1091581 - 1092615 + | NusA antitermination factor TRQ2_1049 1094183 - 1093008 - | ComEC/Rec2-related protein TRQ2_1048 1092635 - 1093093 + | ferric uptake regulator family protein TERM 1162 1093480 - 1093439 - GT 100 -16.7 -4.20932 | opp_overlap 1093437 1093436, overlap 1093442 AAGAGGGAGCGAAAA CAACGGTGGGATCCACGAT CATC ATAAAGGATCCCACCGTTG CCGTTGTATGAAGGG TERM 1163 1093477 - 1093442 - GT 100 -12.6 -4.22214 | opp_overlap 1093437 1093436, overlap 1093439 AGGGAGCGAAAACAA CGGTGGGATCCACGAT CATC ATAAAGGATCCCACCG TTGCCGTTGTATGAA TERM 1164 1093561 - 1093541 - GT 72 -3.2 -4.99035 | overlap 1093542 1093553 1093554 CTACCCAGAGAAAAA CGGTCAGG TAAAC CCTGATCA CAGAAGGCGTTCCCA TERM 1165 1094152 - 1094135 - GT 100 -10.5 -5.10154 | ACGGAAAACGAAAAA GGGCGCC GATC AGCGCCC CGAGACACAGGGAGA TRQ2_1050 1095385 - 1094180 - | phosphonopyruvate decarboxylase-related protein TRQ2_1051 1097004 - 1095388 - | TPR repeat-containing protein TRQ2_1052 1098587 - 1097001 - | Dak phosphatase TERM 1166 1098225 - 1098239 + g 72 -5.6 -4.44974 | overlap 1098227 AACAGGTCTCATGAC GGCGCT GTA AGCGAC TTTTCTGGCGTTTGA TRQ2_1053 1098933 - 1098604 - | hypothetical protein TRQ2_1054 1100756 - 1098930 - | deoxyxylulose-5-phosphate synthase TERM 1167 1099781 - 1099801 + gr 72 -3.1 -4.92791 | overlap 1099772 1099797 CTGTTCCGTCGGCCA TCGCAGCCG TTA TGGCGACGA TTTTCTTGTCTTCTC TRQ2_1055 1100928 - 1100719 - | exodeoxyribonuclease VII, small subunit TRQ2_1056 1102127 - 1100943 - | exodeoxyribonuclease VII, large subunit TERM 1168 1102018 - 1101998 - G 100 -4.6 -5.88197 | overlap 1102000 1102001 CTAAAGAGAAAAAAA TATGCCCC TTCCT GGGGCGCA CACCGGAAATCTCAC TERM 1169 1102016 - 1102000 - G 72 -5 -4.5577 | overlap 1101998 1102001 AAAGAGAAAAAAATA TGCCCC TTCCT GGGGCG CACACCGGAAATCTC TRQ2_1057 1102939 - 1102124 - | methenyltetrahydrofolate cyclohydrolase TRQ2_1058 1104581 - 1102953 - | formate--tetrahydrofolate ligase TRQ2_1059 1105021 - 1104593 - | NusB antitermination factor TERM 1170 1105023 - 1105041 + r 71 -4.6 -4.73617 | CTCGGTGTTTTCATG TCTGGA TCTCCTT TCCAGA TTTATTCTTTCTTTT TRQ2_1060 1105408 - 1105043 - | hypothetical protein TRQ2_1061 1105981 - 1105424 - | translation elongation factor P TERM 1171 1106004 - 1106034 + r 100 -14.1 -4.4891 | opp_overlap 1106005, overlap 1106005 CCTCCTTACAACAAA ATCTACGAGGGGA TTTTC TCCCCTCGTAGAA TTTTATCATAATCGA TERM 1172 1106033 - 1106005 - R 100 -17.6 -4.77165 | opp_overlap 1106005 1106004 CTCCTTACAACAAAA TCTACGAGGGGA TTTTC TCCCCTCGTAGA ATTTTATCATAATCG TERM 1173 1106005 - 1106033 + r 100 -17.6 -3.28864 | opp_overlap 1106005, overlap 1106004 CTCCTTACAACAAAA TCTACGAGGGGA TTTTC TCCCCTCGTAGA ATTTTATCATAATCG TRQ2_1062 1107962 - 1106055 - | transketolase domain-containing protein TERM 1174 1106253 - 1106234 - G 76 -8.6 -4.08692 | CAAGCCCGGTGAAAA CGTTGTGA TCTT CCACAACG AGAACGGGTTTTCCA TERM 1175 1106365 - 1106395 + g 95 -13.4 -3.79113 | AGTTCGTCTGCAGCG CTTACGGCTTCACA GAG TGTGGAACCGTAAG TTATTATCACCGCGT TERM 1176 1107080 - 1107092 + g 73 -4.1 -4.75934 | overlap 1107081 AAACTTTCTTGTGCT TTTCC ATT GGAAG TTGTTTTCTTTTTTC TERM 1177 1108194 - 1108171 - g 75 -9.5 -3.65313 | GAATGAGATTTCAAA CGCTCCTCG GTGTTA CGGGGAGCG GAAAGACTTTCACCA TERM 1178 1109918 - 1109906 - g 78 -6.3 -4.61633 | AGACACTGTGAAAAA CATCT TTG AGATG AAGAAAACGCTCTCT TRQ2_1063 1108074 - 1110068 + | excinuclease ABC, B subunit TERM 1179 1110053 - 1110080 + T 93 -12.2 -3.85698 | gap 1, opp_overlap 1110053 1110059, overlap 1110059 GGAAGAGATAAAAAA GAAAAA-GGGGCT TTG AGCCCCTTTTTTC TTTCTGGCGGGGACG TERM 1180 1110079 - 1110053 - T 100 -12.4 -5.47431 | opp_overlap 1110053 1110059, overlap 1110059 GGAAGAGATAAAAAA GAAAAAGGGGCT TTG AGCCCCTTTTTT CTTTCTGGCGGGGAC TERM 1181 1110059 - 1110073 + T 100 -11.4 -5.72622 | opp_overlap 1110053 1110059, overlap 1110053 GATAAAAAAGAAAAA GGGGCT TTG AGCCCC TTTTTTCTTTCTGGC TERM 1182 1110073 - 1110059 - T 100 -11.4 -5.8096 | opp_overlap 1110059 1110053, overlap 1110053 GATAAAAAAGAAAAA GGGGCT TTG AGCCCC TTTTTTCTTTCTGGC TRQ2_1064 1110761 - 1110201 - | pyruvate ferredoxin/flavodoxin oxidoreductase TRQ2_1065 1111506 - 1110763 - | thiamine pyrophosphate binding domain-containing protein TERM 1183 1111144 - 1111165 + g 79 -7.4 -4.386 | ACCGTACACCGCGTT GTTGACAA ATATCG TTGTCAAC TTTTCTCCACGGTTC TRQ2_1066 1112558 - 1111497 - | pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein TERM 1184 1112277 - 1112261 - G 84 -7.9 -4.84359 | CCACGTTGACAAAAA CGCAGGG AAG CTCTGCG CCTGCAATGTATGAG TRQ2_1067 1112804 - 1112571 - | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein TRQ2_1068 1113457 - 1112801 - | hypothetical protein TRQ2_1069 1114553 - 1113426 - | butyrate kinase TRQ2_1070 1115439 - 1114558 - | phosphate butyryltransferase TERM 1185 1115421 - 1115431 + g 78 -5.4 -4.88407 | opp_overlap 1115421 GAACCAGTTCAACCA TCTC CAG GAGA TTTTTCATTCGATCA TRQ2_1071 1116509 - 1115436 - | butyrate kinase TRQ2_1073 1117933 - 1116944 - | glycoside hydrolase family protein TERM 1186 1117793 - 1117749 - G 79 -3 -5.40474 | gap 1, opp_overlap 1117733, overlap 1117792 ATTTTCTCAAAAAAA TCTTCTCTGATAATAAATGAG TTGC CCCAGTC-TGACCAGAGAAGA TGACACATAGGGATT TRQ2_1074 1118933 - 1117926 - | glycoside hydrolase family protein TRQ2_1075 1119898 - 1118939 - | oligopeptide/dipeptide ABC transporter, ATPase subunit TERM 1187 1119307 - 1119295 - G 75 -6.3 -4.4078 | opp_overlap 1119294 1119295, overlap 1119299 TGTGTGCAATGAAAA GGTAT GAG ATACC CATTTTCTGCTGTAT TERM 1188 1119842 - 1119862 + g 82 -2.6 -5.50499 | overlap 1119844 AACTGCTTTAAGTAT TCTTTTCC CCTGA GGAAAATA TTTTTTTAAATCTAC TERM 1189 1119844 - 1119860 + g 70 -5.2 -4.38666 | overlap 1119842 CTGCTTTAAGTATTC TTTTCC CCTGA GGAAAA TATTTTTTTAAATCT TRQ2_1076 1120869 - 1119895 - | oligopeptide/dipeptide ABC transporter, ATPase subunit TERM 1190 1120053 - 1120068 + g 79 -3.2 -5.40072 | overlap 1120055 GGTTTGGTGGGTTTC CCGGTA TTGG TACCAG TTTTTTTCCGCGGGA TRQ2_1077 1121735 - 1120866 - | binding-protein-dependent transport systems inner membrane component TRQ2_1078 1122715 - 1121753 - | binding-protein-dependent transport systems inner membrane component TRQ2_1079 1124703 - 1122775 - | extracellular solute-binding protein TERM 1191 1123971 - 1123944 - G 73 -4.2 -4.82901 | CTGCGGTGATAAAAA CAGCATCTATCT CTCC AGCTAAATACTG CTGCAATCCAAGCCC TERM 1192 1124947 - 1124929 - R 100 -13.8 -5.41746 | AATCTTTGAAAAAAA CGGGCCCA TTG CGGGCCCG CCGGGGTGTGGGGAA TRQ2_1080 1125592 - 1124969 - | hypothetical protein TRQ2_1081 1126702 - 1125671 - | threonine aldolase TRQ2_1082 1126790 - 1127614 + | aldo/keto reductase TERM 1193 1127605 - 1127624 + T 71 -5 -4.56597 | overlap 1127623 GAAGCTACTGGACAG CCTTGG CTAATTCT CCAAGG TTTTTGAAGACGAAA TRQ2_1083 1128373 - 1127594 - | HAD family hydrolase TRQ2_1084 1129091 - 1128363 - | RNA methyltransferase TRQ2_1085 1129467 - 1129045 - | ribonuclease III TRQ2_1086 1130377 - 1129472 - | hypothetical protein TRQ2_1087 1131120 - 1130383 - | zinc/iron permease TERM 1194 1131084 - 1131051 - G 100 -8.9 -5.40072 | gap 1 GCGGTTTTAAAAAAA GGAACGGCAAC-GCAC CGA GCGAGGTTGCCATTCC CGCGATCGTGCTGTA TRQ2_1088 1131966 - 1131130 - | inosine guanosine and xanthosine phosphorylase family protein TERM 1195 1131823 - 1131835 + g 79 -9.1 -4.12188 | overlap 1131817 GTAGGGTATCTTCTT GGAGG TTC CCTCC TTTTCCACCTCATCC TRQ2_1089 1133359 - 1132004 - | replicative DNA helicase TRQ2_1090 1136556 - 1133371 - | permease YjgP/YjgQ family protein TERM 1196 1133635 - 1133617 - G 73 -4.6 -4.77165 | TGTCTGATAAGAAAA TTCCAG GTTGTCA CTGGAA TAACTCATTTTCAAA TERM 1197 1133775 - 1133763 - G 72 -6.3 -4.25104 | opp_overlap 1133751 1133762 GGTTTTCCATGAAAA GGAAA TTC TTTCC GTATATCCTCATCTG TERM 1198 1134429 - 1134417 - G 71 -3.3 -4.80487 | opp_overlap 1134417 1134421 CAGAACGAAAAGAAA GGCTC ACC GACCC GGAGTTCCTCTTTTC TERM 1199 1135959 - 1135974 + g 75 -3.2 -5.24531 | opp_overlap 1135959 AATTTCCATCGAAGA GGTACC AGTC GTTACC TTTTTTCTGCACCCT TRQ2_1091 1137247 - 1136540 - | phosphate uptake regulator, PhoU TERM 1200 1137124 - 1137134 + g 77 -6.8 -4.41616 | overlap 1137117 1137116 CGATCACTTCCCTGG CGAG GGA CTCG TTTCTTTCGACAAGT TRQ2_1092 1138020 - 1137244 - | ATP-NAD/AcoX kinase TRQ2_1093 1138313 - 1138017 - | protein of unknown function YGGT TRQ2_1094 1139003 - 1138314 - | alanine racemase domain-containing protein TRQ2_1095 1140019 - 1139015 - | Holliday junction DNA helicase RuvB TERM 1201 1139880 - 1139911 + g 80 -6.6 -4.88293 | gap 1, overlap 1139902 TCGAGTACTTCTCCC CTCATCTTCGCTGCT TCG AG-AGCGAGGGAGAG TTTCTTTTTCACGTT TERM 1202 1140073 - 1140098 + r 88 -11.9 -3.48276 | opp_overlap 1140078, overlap 1140078 1140097 TATACCACTCGAACA AAAAAGGGGGC TTGC GCCCCCTTTTC TTCTCTGAAAAAGGA TERM 1203 1140093 - 1140078 - R 100 -11.8 -5.46657 | opp_overlap 1140073 1140078 CACTCGAACAAAAAA GGGGGC TTGC GCCCCC TTTTCTTCTCTGAAA TERM 1204 1140078 - 1140093 + r 100 -11.8 -4.84311 | opp_overlap 1140078, overlap 1140073 CACTCGAACAAAAAA GGGGGC TTGC GCCCCC TTTTCTTCTCTGAAA TRQ2_1096 1141327 - 1140116 - | S-layer domain-containing protein TRQ2_1097 1142136 - 1141324 - | 3-methyl-2-oxobutanoate hydroxymethyltransferase TRQ2_1098 1142896 - 1142102 - | hypothetical protein TRQ2_1099 1144008 - 1142887 - | threonyl/alanyl tRNA synthetase SAD TRQ2_1100 1144625 - 1144005 - | V-type ATPase, D subunit TRQ2_1101 1146004 - 1144622 - | H+transporting two-sector ATPase alpha/beta subunit central region TERM 1205 1145178 - 1145205 + g 71 -10.6 -2.69813 | opp_overlap 1145178 1145180, overlap 1145176 1145177 1145180 AGATCTGAGTACAGA TACCCGGGGTAA CCTT TTCTCCCGGGTA CTTCTCCTCTGTAGT TRQ2_1102 1147769 - 1146009 - | H+transporting two-sector ATPase alpha/beta subunit central region TRQ2_1103 1148347 - 1147769 - | H+transporting two-sector ATPase E subunit TERM 1206 1147800 - 1147812 + g 76 -4.1 -4.99435 | TTCTTCGTTATGAAG GTGAA TAT TTCGC TTTTTCGTTCTTCGA TRQ2_1104 1148654 - 1148340 - | vacuolar H+transporting two-sector ATPase F subunit TRQ2_1105 1149084 - 1148656 - | H+transporting two-sector ATPase C subunit TRQ2_1106 1150955 - 1149099 - | V-type ATPase 116 kDa subunit TERM 1207 1150110 - 1150141 + g 78 -5.2 -5.00884 | gap 1 ATGGGTTGTCCAGCC CGAGATC-ACGAGGA AAT TCTCCGTTGATTTCG TTTTTTGGAGGAGAT TERM 1208 1150583 - 1150594 + g 76 -2.2 -5.2894 | GTCTTTCAACTATCT CGAG ATCT TTCG TTTTCTTTTCTCTTT TRQ2_1107 1152001 - 1150961 - | H+transporting two-sector ATPase C (AC39) subunit TERM 1209 1151201 - 1151224 + g 72 -3.2 -5.03145 | gap 1, opp_overlap 1151201, overlap 1151190 TACATCCTTGAAGAA CTTTC-CATAC GGA GTTTGAGAAAG TTTTTTGAGAAATTC TRQ2_1108 1152329 - 1152006 - | hypothetical protein TRQ2_1109 1153360 - 1152329 - | metallophosphoesterase TERM 1210 1153355 - 1153345 - G 71 -6.8 -4.1585 | CCAGAACTTTCAAAA CGGA CAG TCCG ATCATGGTAATTACT TERM 1211 1153399 - 1153385 - H 74 -5.6 -4.72986 | TATTCCTATCAAAAA GGAGCG CGT CGTTCC ACCTCCTTATGAGAG TERM 1212 1153495 - 1153482 - H 88 -3.8 -5.55698 | opp_overlap 1153482 TACAATTTAAAAAAA CGCA AGGAGG TGCG TTCATGAGGCTTGAA TRQ2_1110 1153499 - 1154239 + | 3-oxoacyl-(acyl-carrier-protein) reductase TERM 1213 1154252 - 1154217 - T 72 -9.8 -3.27498 | gap 1, opp_overlap 1154219, overlap 1154219 GACAGGTGATAGGAA TAGATG-GGGGCCTC GTGATCT GAGGCCCCTCATCTT CTGAAGACTTCCACT TERM 1214 1154250 - 1154219 - T 86 -12.4 -3.20078 | gap 1, opp_overlap 1154219, overlap 1154217 CAGGTGATAGGAATA GATG-GGGGCCTC GTGATCT GAGGCCCCTCATC TTCTGAAGACTTCCA TERM 1215 1154219 - 1154250 + T 95 -13.1 -3.31322 | gap 1, opp_overlap 1154217 1154219 CAGGTGATAGGAATA GATG-GGGGCCTCG TGATC TGAGGCCCCTCATC TTCTGAAGACTTCCA TRQ2_1111 1155400 - 1154246 - | amidohydrolase TRQ2_1112 1156250 - 1155384 - | hypothetical protein TERM 1216 1156173 - 1156155 - G 100 -14.6 -4.53705 | opp_overlap 1156146 AACGGCGATATAAAA GGTGGGAG AGA CTCCCACC AGTACGATCTTCTGT TERM 1217 1156275 - 1156286 + r 70 -3 -4.91712 | overlap 1156285 CCCGCTTCTCACTGT GAAT TCGA ATTC TTTTTCTGAATTGGC TRQ2_1113 1157432 - 1156254 - | hypothetical protein TERM 1218 1156536 - 1156548 + g 72 -4.8 -4.61231 | GTCCGTTACGGGAAG CTCC AGAAG GGAG TTTTTCGGAGTGTCG TRQ2_1114 1157497 - 1157931 + | GCN5-related N-acetyltransferase TERM 1219 1158806 - 1158794 - g 82 -7.7 -4.56597 | TCGTCTTTTGAAAAA GTGGA TTC TCCAC CCTCTGGTCGACAGA TRQ2_1115 1157928 - 1160309 + | DNA mismatch repair protein MutS TRQ2_1116 1160940 - 1160278 - | ribulose-phosphate 3-epimerase TRQ2_1117 1161821 - 1160940 - | ribosome small subunit-dependent GTPase A TERM 1220 1161263 - 1161248 - G 72 -9 -3.53444 | GGAGTTTCTCTGAAA CTTCGC TCAC GCGAAG CTTCAAGCCCGGATT TRQ2_1118 1162438 - 1161824 - | PASTA domain-containing protein TRQ2_1119 1163466 - 1162435 - | radical SAM protein TERM 1221 1162947 - 1162958 + g 79 -3 -5.35365 | TCTTTTTGTGGTTCA GTAT TCTT ATAC TTTTTATTGTGTTTT TERM 1222 1163312 - 1163293 - G 77 -10.8 -3.46205 | opp_overlap 1163291 1163297 1163298 GAAAGGAATGGAGAA GTGCTCTT TCAA AAGAGCAC GGTGCTGTTTTGAAA TERM 1223 1163297 - 1163329 + g 89 -11.5 -4.03078 | opp_overlap 1163293, overlap 1163291 1163298 GGAATGGAGAAGTGC TCTTTCAAAAGAGCA CGG TGCTGTTTTGAAAGG TTTGTCATCTCATCG TERM 1224 1163298 - 1163328 + g 80 -12.8 -3.01365 | opp_overlap 1163293, overlap 1163291 1163297 GAATGGAGAAGTGCT CTTTCAAAAGAGCA CGG TGCTGTTTTGAAAG GTTTGTCATCTCATC TERM 1225 1163994 - 1164008 + G 76 -2.1 -5.44119 | GAAGAAAAATTTGGC TTTCG AAGAA CGAGA TTTTTTTCGGCTACA TRQ2_1120 1163519 - 1164421 + | UDP-N-acetylenolpyruvoylglucosamine reductase TRQ2_1121 1164397 - 1164975 + | hypothetical protein TRQ2_1122 1164996 - 1165262 + | hypothetical protein TRQ2_1123 1165240 - 1165506 + | hypothetical protein TRQ2_1124 1165503 - 1166348 + | hypothetical protein TRQ2_1125 1166352 - 1167296 + | protein of unknown function UPF0052 and CofD TERM 1226 1167458 - 1167473 + G 100 -11.8 -4.37711 | TCTTTGCATTCTTTT GCCGCC TCGA GGCGGC TTTTGAATTTAATGA TERM 1227 1167817 - 1167797 - g 73 -4.1 -4.91285 | opp_overlap 1167797 AGGAATACAAGAAAA CTTTATATA AAG TCTATAAAG GATATTCTTGTGTTC TERM 1228 1168087 - 1168067 - g 78 -5.4 -4.89063 | overlap 1168069 CGATTGAAAAACAAA GAGCTCTC ACTCA GAGAGCTG GGGAAAAAGTTGAAT TERM 1229 1168085 - 1168069 - g 73 -8 -4.05491 | overlap 1168067 ATTGAAAAACAAAGA GCTCTC ACTCA GAGAGC TGGGGAAAAAGTTGA TRQ2_1126 1167302 - 1168177 + | hypothetical protein TRQ2_1128 1168640 - 1169110 + | transcription elongation factor GreA TRQ2_1129 1169124 - 1170632 + | lysyl-tRNA synthetase TRQ2_1130 1170629 - 1172374 + | hypothetical protein TERM 1230 1172384 - 1172397 + G 76 -5.3 -4.82901 | GAATGAAATGAGCGA CTATC TTCT GATAG TTTTTCTGGCAGCAA TERM 1231 1173572 - 1173591 + G 75 -2.8 -5.14163 | gap 1, opp_overlap 1173572 GCAGGCTATACATTA CGCCG-ATG AAG CGTTCGGTG TTTTTCTTGATGAAT TRQ2_1131 1172376 - 1174157 + | sulfatase TRQ2_1132 1174522 - 1174139 - | hypothetical protein TRQ2_1133 1175847 - 1174534 - | MATE efflux family protein TERM 1232 1175855 - 1175877 + H 73 -4.9 -4.66318 | overlap 1175856 AGTTTCACTATGGCT TTTCTGGGA TCTCC TCTCAGAAG TTTTATTCCGATGGT TRQ2_1134 1175975 - 1176577 + | HAD family hydrolase TRQ2_1135 1178207 - 1176564 - | metal dependent phosphohydrolase TERM 1233 1177408 - 1177426 + g 83 -2.4 -5.63236 | ACCACCTCGATCTGG CCGTTTTT CAG AAAGAAGG TTTTTATTTTTCCAT TRQ2_1136 1179433 - 1178246 - | aminotransferase class I and II TERM 1234 1178393 - 1178381 - G 77 -9.1 -3.84185 | TGGAGTCAAATAGAA TCCCC TCA GGGGA GCGACCATGGTTGTT TERM 1235 1179306 - 1179296 - G 70 -2.4 -5.0133 | opp_overlap 1179296 GATGCGCTCAAAAAA CACC TCG GGAG TTTTCAGATCGGGCT TRQ2_1137 1180614 - 1179439 - | hypothetical protein TERM 1236 1180490 - 1180478 - G 74 -3.3 -5.00616 | CCTTTTCCGAAAAAA GAACC GTC GGGTC TGAAAACATCCACAA TRQ2_1138 1181337 - 1180615 - | peptidase A24A domain-containing protein TERM 1237 1180882 - 1180870 - G 76 -4.1 -4.93365 | overlap 1180872 TTTCAGAATCAAAAA CATGA TCG TCACG ATGAGAAAGGAAATC TERM 1238 1181234 - 1181260 + g 77 -10.9 -3.21622 | opp_overlap 1181231 1181234 GGACAGAATGAATGA GGAGGATCCCA CAGCT TGAGATCCTCC TTCGTAGATCTGTAT TERM 1239 1181260 - 1181234 - G 82 -13.1 -2.88731 | opp_overlap 1181234, overlap 1181231 GGACAGAATGAATGA GGAGGATCCCA CAGCT TGAGATCCTCC TTCGTAGATCTGTAT TRQ2_1139 1182395 - 1181322 - | TPR repeat-containing protein TERM 1240 1183322 - 1183338 + G 78 -6.5 -4.56597 | GAAAAAATAGCGGAG GAAACCG GTG CGGTTGC TTTTTACACGGGGGA TRQ2_1140 1182503 - 1183660 + | thiamine biosynthesis/tRNA modification protein ThiI TRQ2_1141 1183657 - 1184400 + | 1-acyl-sn-glycerol-3-phosphate acyltransferase TERM 1241 1184919 - 1184900 - g 87 -7.2 -5.12068 | GATAGTGAAGAAAAA GAACAAAG AAAC CCTTGTTC ATGTGGATGCTGTTC TRQ2_1142 1184397 - 1185551 + | cysteine desulfurase TRQ2_1143 1185585 - 1186463 + | YicC domain-containing protein TRQ2_1144 1186476 - 1186754 + | hypothetical protein TERM 1242 1186919 - 1186939 + G 72 -4.7 -4.57073 | overlap 1186920 GATGGCAAGGATTAT TTCTTCATC ACG GAAGAAGAG TTTTTGAAGCGCGTC TRQ2_1145 1186766 - 1187389 + | guanylate kinase TRQ2_1146 1187374 - 1187613 + | DNA-directed RNA polymerase, omega subunit TERM 1243 1188020 - 1187997 - gf 72 -6.2 -4.29508 | gap 1 ATGTACAGCAACAAA CTGTTTCAAGA GAA TCTTGAAA-AG CTAAAAAACAACGGC TERM 1244 1188045 - 1188029 - gf 79 -3.7 -5.2696 | TGAAAAGCTAAAAAA CAACG GCTGGTT CGTTG TGGAACCCGAAGAAG TERM 1245 1188499 - 1188478 - gf 82 -7.3 -4.6971 | opp_overlap 1188480, overlap 1188480 GAAAGCTGAAGAAAA CAGAGAACG ATCT CGTTCTCCA TCTCGAAAGAACAAA TERM 1246 1188497 - 1188480 - gf 81 -9.9 -3.9504 | opp_overlap 1188480, overlap 1188478 AAGCTGAAGAAAACA GAGAACG ATCT CGTTCTC CATCTCGAAAGAACA TRQ2_1147 1187616 - 1188800 + | phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase TERM 1247 1188883 - 1188894 + GT 70 -5.8 -4.36903 | ACCTTTCTTCTCTAC TCCC CGGC GGGA TTTGTGTTTCCTGAA TRQ2_1148 1188763 - 1189911 + | ErfK/YbiS/YcfS/YnhG family protein TERM 1248 1189942 - 1189916 - T 100 -11.6 -5.1675 | opp_overlap 1189921, overlap 1189921 GGATCTATTAAAAAA TAAAAGCGGGGA TCA CCCCCGCTTTTT TACCATGCGCTTCTT TERM 1249 1189937 - 1189921 - T 100 -11.5 -5.45813 | opp_overlap 1189921, overlap 1189916 TATTAAAAAATAAAA GCGGGGA TCA CCCCCGC TTTTTTACCATGCGC TERM 1250 1189921 - 1189937 + T 100 -10.8 -5.0538 | opp_overlap 1189916 1189921 TATTAAAAAATAAAA GCGGGG ATCAC CCCCGC TTTTTTACCATGCGC TRQ2_1149 1190316 - 1189942 - | RNA-binding S1 domain-containing protein TRQ2_1150 1190565 - 1190350 - | ribosomal protein L31 TERM 1251 1190679 - 1190654 - R 72 -3.1 -4.99645 | opp_overlap 1190656 1190659, overlap 1190655 1190659 AGTGGAGAAAGAAAA TTTAAGCCCCC AGGC GGGGGCTGATT CGTCTCTTTACTGAA TERM 1252 1190656 - 1190677 + r 77 -10.1 -3.43328 | opp_overlap 1190655 1190654 1190659, overlap 1190659 TGGAGAAAGAAAATT TAAGCCCCC AGGC GGGGGCTGA TTCGTCTCTTTACTG TERM 1253 1190659 - 1190674 + r 80 -11.8 -2.85874 | opp_overlap 1190655 1190654 1190659, overlap 1190656 AGAAAGAAAATTTAA GCCCCC AGGC GGGGGC TGATTCGTCTCTTTA TERM 1254 1190674 - 1190659 - R 88 -11.8 -3.49818 | opp_overlap 1190659 1190656, overlap 1190655 1190654 AGAAAGAAAATTTAA GCCCCC AGGC GGGGGC TGATTCGTCTCTTTA TRQ2_1151 1190887 - 1190687 - | cold-shock DNA-binding domain-containing protein TRQ2_1152 1191034 - 1192731 + | metal dependent phosphohydrolase TRQ2_1153 1192805 - 1193020 + | hypothetical protein TERM 1255 1193225 - 1193250 + F 100 -11.9 -4.56597 | opp_overlap 1193226 1193230, overlap 1193226 GAGGCTGGTGGTAAT ATGAAGGGGGT ATCA ACCCCCTTCAG TTTTTGAGCGGAGGG TERM 1256 1193249 - 1193226 - f 93 -15.4 -3.01791 | opp_overlap 1193226 1193225, overlap 1193230 AGGCTGGTGGTAATA TGAAGGGGGT ATCA ACCCCCTTCA GTTTTTGAGCGGAGG TERM 1257 1193226 - 1193249 + F 100 -15.4 -3.33744 | opp_overlap 1193226 1193230, overlap 1193225 AGGCTGGTGGTAATA TGAAGGGGGT ATCA ACCCCCTTCA GTTTTTGAGCGGAGG TERM 1258 1193245 - 1193230 - f 76 -10.4 -3.36273 | opp_overlap 1193226 1193225, overlap 1193226 TGGTGGTAATATGAA GGGGGT ATCA ACCCCC TTCAGTTTTTGAGCG TRQ2_1154 1193272 - 1194039 + | beta-lactamase domain-containing protein TERM 1259 1194424 - 1194450 + T 74 -7.3 -4.29738 | gap 1, overlap 1194425 TTCCTATTTGACCTC CTCCCAATCCCC TGAA GGGGA-TGGGAC TTTTGGTGGCTCTCA TERM 1260 1194425 - 1194449 + T 78 -10.8 -3.17361 | gap 1, overlap 1194424 TCCTATTTGACCTCC TCCCAATCCCC TGAA GGGGA-TGGGA CTTTTGGTGGCTCTC TRQ2_1156 1195659 - 1194463 - | IS605 family transposase OrfB TERM 1261 1194934 - 1194950 + g 80 -6.5 -4.88918 | overlap 1194930 GTTGATCTGGTTTCT GAGCCGT CTC AGGGCTC TTTTCTTTGCACTAA TERM 1262 1195759 - 1195716 - R 71 -8.3 -3.52093 | gap 2, opp_overlap 1195713 1195725, overlap 1195719 1195720 1195722 ACAGTTGAACTACAA CAACCACTTA--CTATCCCCC TGAA GGGGGATAGCTTGCGTGGTTG GGGTTCTGTCATGGA TERM 1263 1195753 - 1195720 - R 70 -9.5 -2.9302 | opp_overlap 1195713 1195725, overlap 1195719 1195716 1195722 TTGAACTACAACAAC CACTTACTATCCCCC TGAA GGGGGATAGCTTGCG TGGTTGGGGTTCTGT TERM 1264 1195725 - 1195748 + r 78 -11 -3.13343 | opp_overlap 1195722 1195720 1195719 1195716, overlap 1195713 CTACAACAACCACTT ACTATCCCCC TGAA GGGGGATAGC TTGCGTGGTTGGGGT TERM 1265 1196324 - 1196340 + r 100 -5.1 -5.72616 | CCTCAAAGGCTTCTT CGTTGAA TTC TTCATCG TTTTTTTCTATCGCT TRQ2_1157 1197071 - 1196565 - | hypothetical protein TRQ2_1158 1197789 - 1197076 - | hypothetical protein TRQ2_1159 1197852 - 1199009 + | hypothetical protein TRQ2_1160 1198996 - 1199256 + | FlhB domain-containing protein TERM 1266 1199283 - 1199260 - T 100 -13.9 -4.63479 | TACGACAAATGAAAA GAGGTCCCC GAACGT GGGGACCTC TGCGTGGTCGGGGCG TERM 1267 1199628 - 1199650 + T 100 -12 -5.45802 | opp_overlap 1199630, overlap 1199630 1199637 AATAGCAGAAGTGTA AAGGGATGCC AAA GGCATCCCTG TTTTTGTTTTACCAG TERM 1268 1199648 - 1199630 - T 100 -14.6 -3.70068 | opp_overlap 1199630 1199628 1199637 TAGCAGAAGTGTAAA GGGATGCC AAA GGCATCCC TGTTTTTGTTTTACC TERM 1269 1199630 - 1199648 + T 100 -14.6 -4.3613 | opp_overlap 1199630, overlap 1199628 1199637 TAGCAGAAGTGTAAA GGGATGCC AAA GGCATCCC TGTTTTTGTTTTACC TRQ2_1161 1200525 - 1200034 - | hypothetical protein TERM 1270 1200277 - 1200304 + g 100 -14.2 -4.0641 | opp_overlap 1200277 CTCTTCAAAAACAAA GAGCATCCCGAA ATCG TCCGGGATGCTC TTTCTGTACATCAGA TERM 1271 1200304 - 1200277 - G 100 -16.4 -4.85782 | opp_overlap 1200277 CTCTTCAAAAACAAA GAGCATCCCGAA ATCG TCCGGGATGCTC TTTCTGTACATCAGA TERM 1272 1200521 - 1200507 - G 82 -7.8 -4.65747 | GAAGTCTCAAGAAAA GGGGTC TCA AACCCC ACATCACCTCAGTTC TRQ2_1162 1201859 - 1200525 - | xylose isomerase TERM 1273 1202484 - 1202471 - g 70 -2.3 -4.9792 | TATCTGATAGAAAAA GGGTT GTTC AGCCC AGAAGACATGTTCCT TRQ2_1163 1201964 - 1203154 + | acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase TRQ2_1164 1203160 - 1203711 + | histidine kinase TRQ2_1165 1203704 - 1204336 + | methyltransferase small TERM 1274 1204347 - 1204318 - gf 78 -10.1 -3.57185 | opp_overlap 1204327, overlap 1204316 1204327 GGGATTGAAAGAAGA TGAAGATAACGCT GAAT AGCGTTTCCTTCA GATACAACGGAGACT TERM 1275 1204806 - 1204824 + GF 70 -8.8 -3.39018 | overlap 1204807 GTTTCCATGCTGGAC CCTCCCTC TCA GAGGGAGA TATTTCAGGTGCTCG TERM 1276 1204807 - 1204823 + GF 81 -12.3 -2.63089 | overlap 1204806 TTTCCATGCTGGACC CTCCCTC TCA GAGGGAG ATATTTCAGGTGCTC TRQ2_1166 1204317 - 1205096 + | ABC transporter related TRQ2_1167 1205056 - 1205799 + | stationary-phase survival protein SurE TRQ2_1168 1205799 - 1206293 + | peptide deformylase TERM 1277 1207018 - 1207034 + G 79 -9.5 -3.66874 | opp_overlap 1206993 1207020, overlap 1207026 CTTTTGGAAGGTGAA GAGATCT ATC AGATCTC TTTCGATCAGATTCC TERM 1278 1207190 - 1207174 - g 72 -6.6 -4.23707 | opp_overlap 1207183 ATAAAGGTGAACAAA TTTCCC GAATT GGGAAA AGCCCCAGATTTTGC TRQ2_1169 1206307 - 1207278 + | peptidase M23 TERM 1279 1207519 - 1207490 - g 73 -7.9 -4.07885 | overlap 1207491 TATGTGGGTTCAAAA TGTCCCAACAAGA TACA TCTTGTTGCGACC TTCACGTCTTCTTAT TERM 1280 1207518 - 1207491 - g 75 -11.4 -3.04517 | overlap 1207490 ATGTGGGTTCAAAAT GTCCCAACAAGA TACA TCTTGTTGCGAC CTTCACGTCTTCTTA TRQ2_1170 1207283 - 1207609 + | hypothetical protein TRQ2_1171 1207683 - 1208870 + | methionine adenosyltransferase TRQ2_1172 1208886 - 1209176 + | ribosomal protein S20 TRQ2_1173 1209245 - 1209907 + | hypothetical protein TERM 1281 1210452 - 1210442 - g 82 -5.4 -5.1287 | opp_overlap 1210442 GTGAGAGGGAAAAAA GTGA ACC TCAC TCCTCTCGAATTTGA TRQ2_1174 1209968 - 1210687 + | two component transcriptional regulator TERM 1282 1210801 - 1210826 + G 77 -6.9 -4.45168 | gap 1, opp_overlap 1210800, overlap 1210803 1210804 AAAGCTGTCAGATAT GCTGGGGGAA AAGGACG TTCCCCC-GC TTTATCTTTTCGAGA TRQ2_1175 1210691 - 1211929 + | PAS/PAC sensor signal transduction histidine kinase TERM 1283 1212511 - 1212498 - g 73 -2.3 -5.19212 | opp_overlap 1212499, overlap 1212499 ATCATGAGCAAAAAA CTCGC TGGC GGGAG CGATGCCTTCGTTCT TERM 1284 1213053 - 1213041 - g 76 -7.7 -4.34486 | opp_overlap 1213040 AGGAAGAAGAAAGAA GATCG AAT CGATC ATAGTGTTGGAATCA TRQ2_1176 1211934 - 1213238 + | pyrimidine-nucleoside phosphorylase TERM 1285 1213941 - 1213929 - g 75 -6.3 -4.54727 | TCTTCGAAAGGAAAA TCGAA GAA TTCGA CGAGGGTGAGAAGAC TERM 1286 1214294 - 1214278 - g 79 -8.7 -4.2528 | overlap 1214291 CGTGAAGGGAATAAA CACCCTC GGA GAAGGTG AAGTCCTCGTTTATA TRQ2_1177 1213235 - 1214896 + | hypothetical protein TERM 1287 1215119 - 1215099 - g 88 -8.3 -4.81851 | opp_overlap 1215099 1215096 ATGGAAAGGCAAAAA GGTGTATCT GAT AGATACCCC TGGATTCTCGGATTT TERM 1288 1215284 - 1215256 - g 81 -4.7 -5.23316 | gap 1, overlap 1215248 1215257 GATGAGATGAAAAAA CCCATCATGGTT TTCGTC AACCA-GATGGA TAAAGAGAGGGCCAA TRQ2_1178 1214896 - 1216947 + | translation elongation factor G TERM 1289 1217091 - 1217054 - g 100 -15.1 -3.81137 | gap 1, opp_overlap 1217058, overlap 1217055 CTTGAAAGACTGAAA GGAATGGGCATCAA-CAC GGT GTGGTTGATGCCCATTCA TCCTACTGGAATAGA TERM 1290 1217090 - 1217055 - g 100 -18.6 -2.882 | gap 1, opp_overlap 1217058, overlap 1217054 TTGAAAGACTGAAAG GAATGGGCATCAA-CAC GGT GTGGTTGATGCCCATTC ATCCTACTGGAATAG TERM 1291 1217058 - 1217087 + G 90 -14.5 -3.23216 | gap 1, opp_overlap 1217055 1217054 AAAGACTGAAAGGAA TGGGCATCAA-CAC GGT GTGGTTGATGCCCA TTCATCCTACTGGAA TRQ2_1179 1216949 - 1218217 + | alpha amylase catalytic region TRQ2_1180 1218232 - 1218513 + | hypothetical protein TERM 1292 1218966 - 1218988 + G 89 -11.4 -4.07568 | opp_overlap 1218966 GATCGCTTTCAGGAA CCTGGAAGAA GGA TTCTTTCAGG TTTTGAAAAACAAGA TRQ2_1181 1218514 - 1219110 + | metal dependent phosphohydrolase TRQ2_1182 1219094 - 1219750 + | hypothetical protein TERM 1293 1219824 - 1219807 - g 85 -6.3 -5.09426 | opp_overlap 1219807 GTGAAGGGTAAAAAA TCCGGAA AGAC TTCCAGA GTTGGTGAGTCGAAG TRQ2_1183 1219747 - 1220205 + | hypothetical protein TRQ2_1184 1221017 - 1220196 - | nicotinate-nucleotide pyrophosphorylase TRQ2_1185 1221918 - 1221022 - | quinolinate synthetase complex, A subunit TERM 1294 1221509 - 1221519 + g 85 -6.8 -5.03145 | opp_overlap 1221501 1221509 CCAAAGATGACCACA CTGG AAT CCAG TTTTTTCACGACTTC TRQ2_1186 1222656 - 1221931 - | aspartate dehydrogenase TERM 1295 1223801 - 1223764 - H 85 -10.7 -3.81951 | overlap 1223800 CTCGACAGCATCAAA GACCGTTTCAATACTTC CTTA GAGGTATGGAAACAGTC AGGAAGCCCGAAGCA TERM 1296 1223966 - 1223999 + H 100 -7.5 -5.59655 | opp_overlap 1223965 1223966, overlap 1223968 AAAGCTGAAATATAC GCGTTTCAATACTTC CTTA GAGGTATGGAAACAC TTTTTTCTTGCTTTC TERM 1297 1224372 - 1224353 - H 74 -4.2 -5.02287 | opp_overlap 1224354, overlap 1224348 1224354 GATAAAAAGAGAAAA GCAGGGAT TAAT ACCCCTGT TTTTTTATTTTTGGG TERM 1298 1224354 - 1224371 + H 100 -5.5 -6.20267 | opp_overlap 1224353 1224348 1224354 ATAAAAAGAGAAAAG CAGGGAT TAAT ACCCCTG TTTTTTTATTTTTGG TERM 1299 1224654 - 1224668 + G 80 -7.1 -4.68103 | CCGGAAAGGTATGTT CTCGG TTATC CCGAG TTTTATTACGGTTAC TRQ2_1187 1224465 - 1225241 + | glycoside hydrolase family protein TRQ2_1188 1225238 - 1226062 + | glycoside hydrolase family protein TERM 1300 1226108 - 1226080 - f 84 -13.2 -2.58677 | opp_overlap 1226080 1226086, overlap 1226086 CACAGAATCACCAAC GAGAAAGGCGGG GCTTT CCCGCCTTTTTC TTTTGGCAAATTTAT TERM 1301 1226080 - 1226108 + F 100 -16.1 -4.13343 | opp_overlap 1226080 1226086, overlap 1226086 CACAGAATCACCAAC GAGAAAGGCGGGG CTT TCCCGCCTTTTTC TTTTGGCAAATTTAT TERM 1302 1226102 - 1226086 - f 86 -10.8 -4.08546 | opp_overlap 1226080 1226086, overlap 1226080 ATCACCAACGAGAAA GGCGGG GCTTT CCCGCC TTTTTCTTTTGGCAA TERM 1303 1226086 - 1226102 + F 100 -11.5 -5.45802 | opp_overlap 1226086 1226080, overlap 1226080 ATCACCAACGAGAAA GGCGGGG CTT TCCCGCC TTTTTCTTTTGGCAA TERM 1304 1226566 - 1226556 - g 78 -5.4 -4.80396 | GAAAACAGTGAAAAA GATC ATC GATC AGGAAAAAGAACATC TRQ2_1189 1226182 - 1226619 + | rubrerythrin TRQ2_1190 1227003 - 1226581 - | BadM/Rrf2 family transcriptional regulator TRQ2_1191 1227031 - 1227900 + | 1,4-dihydroxy-2-naphthoate octaprenyltransferase TRQ2_1192 1227906 - 1228526 + | abortive infection protein TRQ2_1193 1228628 - 1229485 + | electron transfer flavoprotein alpha/beta-subunit TRQ2_1194 1229478 - 1230494 + | electron transfer flavoprotein alpha subunit TERM 1305 1231519 - 1231499 - g 70 -9.1 -3.34398 | opp_overlap 1231496, overlap 1231497 CTCGCCGCTGAAACA CTTCTCGAA GCT TTCGAAAAG GGAGATTTTTCTGAA TRQ2_1195 1230491 - 1231807 + | FAD dependent oxidoreductase TERM 1306 1231897 - 1231886 - g 76 -4.4 -5.09259 | CATCTCAAAATAAAA GATG AAAG CATC TGTGCGGAAAAATGT TRQ2_1196 1231814 - 1232092 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein TRQ2_1197 1232102 - 1232443 + | hypothetical protein TERM 1307 1232889 - 1232877 - gf 76 -6.3 -4.49344 | AAACCGATTACAAAA GAAGA ATA TCTTC GCATAGTTGAGGGAA TRQ2_1198 1232409 - 1233308 + | polyprenyl synthetase TRQ2_1199 1233321 - 1233905 + | hypothetical protein TERM 1308 1233912 - 1233925 + F 84 -9.5 -4.21954 | opp_overlap 1233912 ATGAGGTAAAAAAAA GGGGC TTCG GCCCC TTCTTTCTGTGTTAG TERM 1309 1233925 - 1233912 - f 100 -9.5 -5.82316 | opp_overlap 1233912 ATGAGGTAAAAAAAA GGGGC TTCG GCCCC TTCTTTCTGTGTTAG TRQ2_1200 1233963 - 1235288 + | cobalamin B12-binding domain-containing protein TRQ2_1201 1235545 - 1235276 - | hypothetical protein TRQ2_1202 1236551 - 1235556 - | flagellar P-ring protein TRQ2_1203 1237161 - 1236562 - | flagellar L-ring protein TRQ2_1204 1238018 - 1237158 - | flagella basal body P-ring formation protein FlgA TERM 1310 1237946 - 1237922 - G 78 -6.3 -4.67982 | opp_overlap 1237923 1237924, overlap 1237925 TGTCATCTAAGAAAA GAACTCCTGGC GAA GCCAGGAGCGT TTCCTTCAACGTCAG TERM 1311 1237923 - 1237945 + g 71 -7.6 -3.91084 | opp_overlap 1237922 1237925, overlap 1237924 GTCATCTAAGAAAAG AACTCCTGGC GAA GCCAGGAGCG TTTCCTTCAACGTCA TERM 1312 1237924 - 1237944 + g 75 -11.1 -2.94329 | opp_overlap 1237922 1237925, overlap 1237923 TCATCTAAGAAAAGA ACTCCTGGC GAA GCCAGGAGC GTTTCCTTCAACGTC TERM 1313 1237943 - 1237925 - G 100 -14.6 -4.44914 | opp_overlap 1237924 1237923, overlap 1237922 CATCTAAGAAAAGAA CTCCTGGC GAA GCCAGGAG CGTTTCCTTCAACGT TRQ2_1205 1238810 - 1238025 - | flagellar basal-body rod protein FlgG TRQ2_1206 1239577 - 1238828 - | hypothetical protein TRQ2_1207 1240592 - 1239582 - | cell shape determining protein MreB TRQ2_1208 1241345 - 1240725 - | Holliday junction resolvase YqgF TRQ2_1209 1244209 - 1241342 - | single-stranded-DNA-specific exonuclease RecJ TERM 1314 1242414 - 1242447 + g 71 -3.9 -4.7497 | ATCGCCAGTTTTCCC CGAAGCTCTTCCTTT ATGG AAAGCAGAAGCTTTG TTTTTGATGGGTAAG TRQ2_1210 1244288 - 1245700 + | metal dependent phosphohydrolase TERM 1315 1246093 - 1246082 - g 70 -2.2 -5.09204 | ACAGGCTAAGAAAAA CCTC AGGG GAGA AGAGAATACTGGTCA TERM 1316 1247365 - 1247351 - g 71 -7.2 -4.16943 | opp_overlap 1247345 CTCCACACTCGAAAA TCTTCA GAG TGAAGA CATCCGTTCTTCCAG TRQ2_1211 1245694 - 1247511 + | polysaccharide biosynthesis protein CapD TERM 1317 1248036 - 1248050 + GT 74 -5.6 -4.63218 | TTGGAGCTTACCTCT CCACGG CAT CGGTGG TTTTCTTCGAGGGAG TRQ2_1213 1249153 - 1248263 - | hypothetical protein TRQ2_1212 1247492 - 1248367 + | glycosyl transferase family protein TERM 1318 1249015 - 1249002 - Gf 75 -3.1 -5.17507 | AAAAGCGAATAAAAA CCTCT CAAG AAAGG TATCTTCGCCCAACC TERM 1319 1249399 - 1249382 - g 70 -9.9 -3.02043 | AAGTGTTCCTGAAGA GCTCTTC AAAA GAAGAGC AGGGGCTTTTGTGAC TRQ2_1214 1249281 - 1249805 + | AMMECR1 domain-containing protein TRQ2_1215 1249818 - 1250813 + | radical SAM domain-containing protein TERM 1320 1251299 - 1251277 - gf 74 -3.4 -4.9792 | overlap 1251278 TATCGGATATAAAAA CGTTCTCTTC GAC GATAAGAACA TGAGAGTGATGGTTA TRQ2_1216 1250780 - 1251829 + | ApbE family lipoprotein TRQ2_1217 1251835 - 1252185 + | hypothetical protein TRQ2_1218 1252182 - 1252727 + | heptaprenyl diphosphate synthase component I TRQ2_1219 1252651 - 1253265 + | maf protein TRQ2_1220 1253213 - 1253860 + | DNA repair protein RadC TRQ2_1221 1253857 - 1254405 + | metal dependent phosphohydrolase TRQ2_1222 1254417 - 1255163 + | deoxyribose-phosphate aldolase TRQ2_1223 1255153 - 1255761 + | formiminotransferase-cyclodeaminase TERM 1321 1255779 - 1255768 - g 82 -3 -5.53288 | TCGAAGTGAAAAAAA CTTT CGGA AAAG CAAGACTGGGTGTCA TRQ2_1224 1255746 - 1256855 + | queuine tRNA-ribosyltransferase TERM 1322 1257232 - 1257221 - g 79 -4.4 -5.12172 | opp_overlap 1257230 CAGGAAGAAAGAAAA GAGA TCGA TCTC CACGGGGGTGTCTCT TRQ2_1225 1256852 - 1257652 + | hypothetical protein TRQ2_1226 1257657 - 1258463 + | MscS mechanosensitive ion channel TERM 1323 1258572 - 1258601 + GF 100 -10.7 -5.09225 | opp_overlap 1258572 GTCTGTTTTCATACA CGCCGAAGGTGAT GAAA ATGCCCTTCGGCG TTTTTTGAATGAGGT TERM 1324 1258601 - 1258572 - gf 75 -10.7 -2.87132 | opp_overlap 1258572 GTCTGTTTTCATACA CGCCGAAGGTGAT GAAA ATGCCCTTCGGCG TTTTTTGAATGAGGT TRQ2_1227 1258438 - 1258710 + | acylphosphatase TERM 1325 1258728 - 1258752 + F 76 -10.1 -3.34895 | ACATGTGTAGTTTAG TAGGTGGATTA AGT TAAACCACCTA TTCATTGAAAATAAA TRQ2_1228 1258862 - 1260163 + | signal recognition particle protein TRQ2_1229 1260177 - 1260464 + | ribosomal protein S16 TRQ2_1230 1260461 - 1260688 + | RNA-binding protein TRQ2_1231 1260693 - 1261223 + | 16S rRNA processing protein RimM TRQ2_1232 1261223 - 1261960 + | tRNA (guanine-N1)-methyltransferase TRQ2_1233 1261954 - 1262532 + | uncharacterized protein-like protein TRQ2_1234 1262535 - 1262882 + | ribosomal protein L19 TERM 1326 1263062 - 1263040 - g 87 -10.6 -4.07568 | overlap 1263042 GCTCTTCGTCGAAAA GATCACGTAC ACT GTACGTGAAC CGCAGATAGGAGAAA TERM 1327 1263060 - 1263042 - g 86 -11.8 -3.63744 | overlap 1263040 TCTTCGTCGAAAAGA TCACGTAC ACT GTACGTGA ACCGCAGATAGGAGA TERM 1328 1263444 - 1263486 + G 91 -11.2 -4.21351 | overlap 1263445 TTGTTTTCTCCCTCA TCGGGGAGGAAGGTCTCAGC TAC GGAGAAGCTTTCCTCCCCGG TTTGTTGAACTATTT TERM 1329 1263445 - 1263485 + G 80 -12.5 -3.11726 | overlap 1263444 TGTTTTCTCCCTCAT CGGGGAGGAAGGTCTCAGC TAC GGAGAAGCTTTCCTCCCCG GTTTGTTGAACTATT TRQ2_1235 1262882 - 1263802 + | signal peptidase I TRQ2_1236 1265610 - 1263799 - | Pyrrolo-quinoline quinone TRQ2_1237 1265680 - 1266417 + | tRNA pseudouridine synthase A TERM 1330 1266772 - 1266788 + G 70 -2.2 -4.95876 | overlap 1266782 AAATCTTTCCAGACT CTCAGC TTCCC GATGAG TTTTTCCTTATCGTT TRQ2_1238 1266414 - 1267730 + | WD-40-like repeat-containing protein TRQ2_1239 1267709 - 1268512 + | hemolysin A TRQ2_1240 1268509 - 1269735 + | hypothetical protein TERM 1331 1269780 - 1269760 - g 79 -9.1 -4.02817 | CTTCGATAAGAACAA GCGCATTTT GAA AAAATACGC GAAGATGGTCTCAAA TRQ2_1241 1269737 - 1272352 + | preprotein translocase, SecA subunit TRQ2_1242 1272358 - 1273461 + | peptide chain release factor 2 TRQ2_1243 1274481 - 1273453 - | Fis family transcriptional regulator TERM 1332 1273534 - 1273554 + g 93 -9.7 -4.56969 | TACTTTTTTTCGATT GCCCTCG TTTTCCT CGAGGGC TTTCTTTATGACCTT TRQ2_1244 1274507 - 1275652 + | hypothetical protein TRQ2_1245 1275663 - 1276106 + | hypothetical protein TRQ2_1246 1276119 - 1277201 + | hypothetical protein TERM 1333 1277281 - 1277304 + G 91 -8.2 -4.91511 | opp_overlap 1277281 1277284 TGAGAACTGCGAAGA GAAGGTCC TCAAAAAT GGACCTTC TTTTTATCGTGAAGT TRQ2_1247 1277195 - 1277803 + | phosphoribosyltransferase TRQ2_1248 1279046 - 1277793 - | hydroxypyruvate reductase TERM 1334 1278197 - 1278229 + g 100 -17.1 -3.885 | TCGCTATGAACCTTC CCGCTTCTCTGGCCT CGC AGTCCAGAGAAGTGG TTATTATCTCCGCGT TERM 1335 1278543 - 1278557 + g 79 -10 -3.74519 | GAATCGACCACCTTT CACCTG CGA CAGGTG TTTCCTCACGGTGTT TRQ2_1249 1279645 - 1279025 - | hypothetical protein TERM 1336 1279393 - 1279353 - G 70 -9.9 -3.11459 | gap 1, overlap 1279357 AAGACGATGATGTAA GGAACGT-CCGGATGG GGTGATCGGG CCATCCAGCACGTTCC AAAACCCTGCGCTGT TERM 1337 1279833 - 1279852 + G 83 -4.2 -5.28176 | opp_overlap 1279837 TACTCTTTTCGAAGA CGAATTCC AAAA GGGAATCG TTTTTTCTGGATGGA TERM 1338 1279943 - 1279927 - g 78 -6.5 -4.59773 | opp_overlap 1279929, overlap 1279932 1279937 CTCGAGGGTGAAAAA GAGCAGC ACA GCTTCTC TGTGGAAGCGAAGCG TRQ2_1250 1279672 - 1280058 + | hypothetical protein TERM 1339 1280403 - 1280381 - g 72 -2.7 -5.08015 | overlap 1280384 AAGGCAAAAAAGAAA GAATGGAAA AGGCA TCTCCTTTC TCATCATCGATCTGG TRQ2_1251 1280064 - 1280786 + | diguanylate cyclase TERM 1340 1281004 - 1281024 + T 100 -11.8 -5.21506 | opp_overlap 1281001, overlap 1281011 TTCAAAAGATATTCA GCCCGGTC AAAAA GGCCGGGC TTTTTGTATTATTCT TRQ2_1252 1283997 - 1281058 - | peptidase C11 clostripain TERM 1341 1284376 - 1284356 - H 75 -9.7 -3.551 | opp_overlap 1284336 GTTCAACGGATAGAA CGGCGGATT CCT AATCCGCAG ATGGAGGTTCGATTC TERM 1342 1284604 - 1284624 + H 91 -8.2 -5.28176 | overlap 1284591 1284590 1284606 TTCAGCTTCAAGGGG AAGCGGGC TTTTT GCCCGCTA TTTTTTATGACTGAA TERM 1343 1284606 - 1284622 + H 88 -10.8 -4.2748 | overlap 1284591 1284590 1284604 CAGCTTCAAGGGGAA GCGGGC TTTTT GCCCGC TATTTTTTATGACTG TRQ2_1253 1284731 - 1285165 + | initiation factor 3 TRQ2_1254 1285180 - 1285377 + | ribosomal protein L35 TERM 1344 1285676 - 1285660 - g 80 -9.5 -3.85698 | TGGTGTTTCCATAAA CAGAAAG ATG CTTTCTG AACTCGCGGTGAACG TRQ2_1255 1285391 - 1285747 + | ribosomal protein L20 TERM 1345 1286377 - 1286343 - g 72 -3 -5.07275 | gap 1 GGAGAGACAGAAAAA CTGGCA-GAAGAA TTTGGTATCC CTCTTCTTGCCAG GATACCCATGGATCC TRQ2_1256 1285758 - 1286501 + | cobyrinic acid ac-diamide synthase TRQ2_1257 1290078 - 1286467 - | TPR repeat-containing diguanylate cyclase and serine/threonine protein kinase TERM 1346 1286494 - 1286509 + gT 71 -7.6 -3.91488 | TCGAGAAAGTACTTT CTCTGT GACC ACAGAG TTCTTTCCAAGAGTT TERM 1347 1286538 - 1286552 + gT 100 -8.5 -5.38549 | TTTTTGCCAGGTAGA GGGCC TCATC GGCCC TTTTTATTGTTTCAA TERM 1348 1287502 - 1287490 - GT 70 -6.3 -4.1585 | GTAGAATTTGTAAAA GGTTT CAT AAACC AGAGCGAGTGTGAGA TERM 1349 1287619 - 1287633 + gT 70 -7.2 -3.88583 | opp_overlap 1287618 AAAAACATAAGCGAT TTCTTC GTT GAAGAA TTTCTGAGGAGTTTC TERM 1350 1288278 - 1288294 + gT 79 -3.7 -5.19879 | overlap 1288279 1288289 CCTTCAGATAAAGCC TTTCTCT TGT GGAGAAG TTTTTCTCTTTGAGC TERM 1351 1289811 - 1289797 - GT 84 -8.6 -4.43283 | opp_overlap 1289797 1289796 1289799 CGAGAGAAAGAGAAA CAGCTT GAG AAGCTG CTTTGCGACCTGATC TRQ2_1258 1291036 - 1290035 - | phosphoesterase domain-containing protein TRQ2_1259 1291831 - 1291037 - | purine nucleoside phosphorylase I, inosine and guanosine-specific TERM 1352 1291652 - 1291675 + g 70 -8.8 -3.30124 | overlap 1291656 TCCAAAAACAAGTTT CCCGCTGTGG CCTT CCACAGTAGG TTGTGGGAAGTGAGG TERM 1353 1291979 - 1292011 + G 79 -9.2 -4.07687 | gap 1, opp_overlap 1291978 AGGTATAGAAATAGT CGGTG-TTACCAAGG TAAC CCTTGGTGATCCCCG TTTTGCGGAAACGCT TRQ2_1260 1291887 - 1292948 + | alanine racemase domain-containing protein TERM 1354 1292951 - 1292937 - f 74 -10 -3.17219 | GAGAAGGTGTATGAA CCCTCA ATT TGAGGG GAAAGTCTTAATACG TRQ2_1261 1292981 - 1293550 + | ECF subfamily RNA polymerase sigma-24 factor TRQ2_1262 1293540 - 1293893 + | hypothetical protein TRQ2_1263 1293883 - 1294665 + | hypothetical protein TERM 1355 1295221 - 1295233 + G 73 -4.1 -4.82901 | opp_overlap 1295221 GAGGTTGTGAAAGAA GAACG TTC TGTTC TTTTTGTACAGAGCC TRQ2_1264 1294662 - 1296317 + | radical SAM domain-containing protein TRQ2_1265 1296332 - 1296859 + | 3H domain-containing protein TERM 1356 1297540 - 1297529 - g 76 -2.2 -5.41143 | GAGCTTCCAAAAAAA GAGA AAGT TCCC ATCCTGGCTCTTTTG TERM 1357 1298066 - 1298031 - g 100 -11.9 -5.04601 | opp_overlap 1298030 1298063, overlap 1298032 TGGAGAAAGGAAAAA GCATCGCGGAAACCC TCGCAT GGATCTCCGCGATGG CAATGTTTGCCGGTG TERM 1358 1298065 - 1298032 - g 100 -15.4 -3.61676 | opp_overlap 1298030 1298063, overlap 1298031 GGAGAAAGGAAAAAG CATCGCGGAAACCC TCGCAT GGATCTCCGCGATG GCAATGTTTGCCGGT TRQ2_1266 1296863 - 1298131 + | major facilitator transporter TRQ2_1267 1298823 - 1298128 - | uridylate kinase TERM 1359 1298864 - 1298844 - R 100 -12.6 -5.42862 | opp_overlap 1298841 1298840 1298844 ATACCTCCAAAAAAA GGGTGAGC TTTTC GCTCACCC TCGCTTATGTGTGTC TERM 1360 1298844 - 1298864 + r 81 -12.6 -2.65591 | opp_overlap 1298844, overlap 1298841 1298840 ATACCTCCAAAAAAA GGGTGAGC TTTTC GCTCACCC TCGCTTATGTGTGTC TRQ2_1268 1299484 - 1298885 - | translation elongation factor Ts TRQ2_1269 1300865 - 1299486 - | ribonuclease TRQ2_1270 1301456 - 1300920 - | sigma 54 modulation protein/ribosomal protein S30EA TRQ2_1271 1302306 - 1301470 - | DegV family protein TERM 1361 1302123 - 1302099 - G 72 -10.7 -2.80988 | opp_overlap 1302099, overlap 1302096 TTATATCACGAAGCA CCCTCTCCATT TCA AGCGGAGAGGG GACGGCTGTTCTGAA TRQ2_1272 1302611 - 1302285 - | H+transporting two-sector ATPase delta/epsilon subunit TERM 1362 1302444 - 1302424 - G 77 -3.9 -5.21709 | TCGCAGAGCAAAAAA CCACCCGCA ACT TTCAGATGG TATTCATCATCACCC TERM 1363 1302496 - 1302530 + g 73 -11.4 -2.72558 | overlap 1302511 ACGGAGAGCTGGGTT ACTATGGGAGCCCTCC TGG GGAGGATTCCCATGGA TCCTTCCACCGTTCT TRQ2_1273 1304022 - 1302616 - | ATP synthase F1, beta subunit TERM 1364 1303607 - 1303568 - G 71 -7.2 -4.15044 | gap 1, overlap 1303569 GCTCCTCCGAAGAAA CCGATCTTTCCGC-CCTTT GGG AACGGAGCGAGAAGATCGA TCACCTTTATACCGG TRQ2_1274 1304855 - 1304034 - | ATP synthase F1, gamma subunit TERM 1365 1304777 - 1304803 + g 74 -10.9 -2.77999 | overlap 1304774 1304772 TTTTTCTCACCTTTG CGCGCGCTA CCATCTCCA TAGCGCGCG TGATCTTCATCAGTG TRQ2_1275 1306388 - 1304877 - | ATP synthase F1, alpha subunit TERM 1366 1305901 - 1305953 + g 77 -12 -2.8806 | ATCAGCTCTCTTTGG CCTCTCCCGATGGGAATCATGGAG TCGAT CGCCTTTATTCCTGTCTGGAGAGG TGTATCGACGGGTTT TERM 1367 1306122 - 1306136 + g 73 -4.2 -4.76423 | CCTTTTCAATCTTCT GACGGT GTG ACCCTC TTTTATATCTTTGTA TRQ2_1276 1306936 - 1306385 - | ATP synthase F1, delta subunit TERM 1368 1306949 - 1306961 + r 74 -7.7 -4.08945 | CATGACTTTTCTATC TCCTC TTT GAGGA TTTTGACGAGATACT TRQ2_1277 1307427 - 1306933 - | ATP synthase F0, B subunit TRQ2_1278 1307698 - 1307441 - | ATP synthase F0, C subunit TRQ2_1279 1308554 - 1307712 - | ATP synthase F0, A subunit TERM 1369 1308516 - 1308530 + g 81 -3.6 -5.42259 | GGAAATGAAGACAGC GAGAAA TAT TTTTTC TTTTTTTGAGAATGC TRQ2_1280 1308892 - 1308551 - | hypothetical protein TRQ2_1281 1309124 - 1308837 - | hypothetical protein TRQ2_1282 1309591 - 1309124 - | CheC domain-containing protein TRQ2_1283 1312286 - 1309605 - | DNA polymerase I TERM 1370 1311153 - 1311169 + g 73 -4.3 -4.75954 | ACCAACGATCTTTGC TCCGGGG TCC TCCAGGA TTTCTTTTAGCTTTT TERM 1371 1312170 - 1312188 + g 84 -10.3 -3.87815 | TCTCACCAGCATCCT CGCCACA CCGTA TGTGGCG TTTGTGGGAATGCCG TRQ2_1284 1312629 - 1312264 - | alkylhydroperoxidase TRQ2_1285 1313304 - 1312636 - | glycerophosphoryl diester phosphodiesterase TRQ2_1286 1313765 - 1313301 - | hypothetical protein TRQ2_1287 1315579 - 1313762 - | GTP-binding protein LepA TERM 1372 1314375 - 1314361 - G 73 -10 -3.47029 | TGATCGAAAGATCAA CGTACG GTT CGTACG CTTCCAGTATCTCGC TERM 1373 1317663 - 1317633 - g 75 -6.1 -4.5493 | overlap 1317634 AGGGAAACAAAAGAA GCTTCTCTCAGGC TTGCG GCCTATGAGAAGA CGGGAGAAAAAGTAT TERM 1374 1317662 - 1317634 - g 73 -9.6 -3.31331 | overlap 1317633 GGGAAACAAAAGAAG CTTCTCTCAGGC TTGCG GCCTATGAGAAG ACGGGAGAAAAAGTA TRQ2_1288 1315677 - 1318034 + | glycoside hydrolase family protein TERM 1375 1318036 - 1318059 + T 73 -5.2 -4.59591 | opp_overlap 1318041, overlap 1318041 ATTACCTGAGATGAC GAAAAGCCCC TTCG GGGGCTTTCA TTTTACTGTTTTGTT TERM 1376 1318041 - 1318054 + T 84 -9.5 -4.26292 | opp_overlap 1318041, overlap 1318036 CTGAGATGACGAAAA GCCCC TTCG GGGGC TTTCATTTTACTGTT TERM 1377 1318054 - 1318041 - T 86 -9.5 -4.33274 | opp_overlap 1318041 1318036 CTGAGATGACGAAAA GCCCC TTCG GGGGC TTTCATTTTACTGTT TRQ2_1289 1318458 - 1318057 - | UvrB/UvrC protein TERM 1378 1318148 - 1318166 + g 76 -2.4 -5.43974 | overlap 1318151 ATCGCCTCATTTAAT TTTCTTTC GAG GAAAGTGA TTTTTCTTTCATTTT TRQ2_1290 1319015 - 1318455 - | aminoacyl-tRNA hydrolase TERM 1379 1318952 - 1318988 + g 73 -10.9 -2.52464 | opp_overlap 1318954 1318981 1318982 AGTCCAGAAACAGAA AACCCACGTTATGCC GGGTGAA GGCATAACGTGGGCC TGGATTCCCCAGACC TERM 1380 1318986 - 1318954 - G 100 -17.9 -4.84918 | opp_overlap 1318952, overlap 1318981 1318982 TCCAGAAACAGAAAA CCCACGTTATGCC GGGTGAA GGCATAACGTGGG CCTGGATTCCCCAGA TRQ2_1291 1319666 - 1319019 - | ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 TERM 1381 1319607 - 1319623 + g 73 -4.3 -4.75776 | overlap 1319606 1319607 TTCTCCACTCCTTCT GAGGCGC CTC GCTTCTC TTTTTCCCTTCACTT TERM 1382 1319607 - 1319621 + g 71 -7.8 -3.98859 | overlap 1319606 1319607 TTCTCCACTCCTTCT GAGGCG CCT CGCTTC TCTTTTTCCCTTCAC TRQ2_1292 1320644 - 1319697 - | ribose-phosphate pyrophosphokinase TRQ2_1293 1321983 - 1320646 - | UDP-N-acetylglucosamine pyrophosphorylase TERM 1383 1320814 - 1320844 + g 78 -4.9 -5.08601 | gap 2, overlap 1320820 1320821 TGAGTTGCTTCCTAT GAATGCTCCATCTTC AAT GAAGGTGG-G-ATTC TTTTTCTTACCATCG TRQ2_1294 1322297 - 1321995 - | hypothetical protein TRQ2_1295 1323079 - 1322294 - | hypothetical protein TERM 1384 1323337 - 1323314 - gH 75 -3.2 -5.14563 | gap 1, overlap 1323315 GTCTCGATGAAAAAA TGGTGAAGAGT CCA ACT-TTCACCC TCATGAACGTTTATC TRQ2_1296 1323142 - 1323627 + | hypothetical protein TERM 1385 1324031 - 1324020 - gf 73 -2.2 -5.14985 | TGAAATACAGAAAAA CGAA GAAA CTCG AAGCACTTATGAGAA TERM 1386 1324234 - 1324196 - gf 95 -13.4 -3.2981 | gap 1, opp_overlap 1324195 GAGACGAAGCAGGAA CTCCTCGAGACGATTCA TCCTCT TGAA-CGTCTCGAGAAG ATACTCTCAATACTG TERM 1387 1324272 - 1324260 - gf 79 -7.7 -4.42062 | TACTGGTGAAAGAAA TCGAG ATT CTCGA GATAGAAGAAGAAAT TERM 1388 1324763 - 1324746 - gf 83 -11.3 -3.28712 | CGTCGCTGGGCAGAA CCATCGC AGAA GCGATGG GAAGAAAGTTCGGAA TERM 1389 1325774 - 1325762 - gf 75 -9.1 -3.65542 | overlap 1325760 TTGAGGGGTAAAATA CTCCC GGT GGGAG GGATAAGAGAGAAAT TRQ2_1297 1323581 - 1325944 + | ATP-dependent protease La TERM 1390 1326226 - 1326242 + G 72 -5.9 -4.41353 | TATGGAGAAGCCCTT GTTTTCT TTG AGAAAGC TTTTAATCTCTCTGA TRQ2_1298 1325941 - 1326327 + | hypothetical protein TERM 1391 1326791 - 1326766 - g 81 -4.7 -5.24531 | AGCTTTGAGAAAAAA CGAGGGAGA CTTCCGGT TCTTCCTCG AATCCAGACTCAACA TRQ2_1299 1326329 - 1327477 + | nuclease SbcCD, D subunit TERM 1392 1327924 - 1327953 + G 79 -9.4 -4.07568 | opp_overlap 1327936 TTTTGACTTCTCCTC CATCGGAGATCA CCGAGA TCATCTCCGATG TTTTCCAAAGCAAAG TERM 1393 1328006 - 1327992 - g 78 -6.4 -4.66264 | GAAAAGCTGGAAAAA CTCCTC AAA GAGAAG ATGAAAAAGTTGGAG TERM 1394 1328244 - 1328223 - g 76 -5.1 -4.85782 | gap 1, opp_overlap 1328228 CTCGTGAAAAAGAAA GAGAG-GCTC AAG GCGCTCTCTC TGAGAAAGAACGAAT TERM 1395 1328449 - 1328434 - g 89 -9 -4.67048 | overlap 1328418 CGATCTCAAAAGAAA TCCCTG TTCA CAGGGA AAGACTTTCCAAGCT TRQ2_1300 1327467 - 1330025 + | SMC domain-containing protein TRQ2_1301 1330018 - 1330638 + | hypothetical protein TRQ2_1302 1330656 - 1331276 + | ABC transporter related TERM 1396 1331506 - 1331491 - g 72 -3.2 -5.00616 | CTTTCTCTGAAAAAA GAAGGG GACA CCATTC TCGATGTGGTGGGAC TRQ2_1303 1331260 - 1332093 + | oxidoreductase FAD/NAD(P)-binding subunit TERM 1397 1332131 - 1332106 - g 81 -3.3 -5.36364 | overlap 1332107 TGAAAAACAGAAAAA CTCCGATGA AGGAACAA TCACCGGAA TCGAGGAGAAGGAAC TRQ2_1304 1332090 - 1333496 + | glutamate synthase (NADPH), homotetrameric TRQ2_1305 1333484 - 1333993 + | dihydrofolate reductase-like protein TERM 1398 1333980 - 1334001 + F 100 -8.7 -5.71712 | opp_overlap 1333949 1333982, overlap 1333982 AATATTCTGTAGAAA AATCGCACC GTTA GGTGCGATA TTTTTTTGTCTGAAG TERM 1399 1333982 - 1333999 + F 100 -11.3 -4.50122 | opp_overlap 1333949 1333982, overlap 1333980 TATTCTGTAGAAAAA TCGCACC GTTA GGTGCGA TATTTTTTTGTCTGA TERM 1400 1333999 - 1333982 - f 100 -11.3 -4.83615 | opp_overlap 1333982 1333980, overlap 1333949 TATTCTGTAGAAAAA TCGCACC GTTA GGTGCGA TATTTTTTTGTCTGA TRQ2_1306 1334029 - 1335612 + | aspartate carbamoyltransferase TERM 1401 1335625 - 1335660 + T 100 -14.2 -4.37092 | opp_overlap 1335633, overlap 1335633 TGAGAAATTTGCGAA AAAAGAAAGCAGGGGA ATTT TCCCCTGCTTTTTTTA TTTTATAGCCAAGCT TERM 1402 1335633 - 1335652 + T 100 -13.6 -6.14618 | opp_overlap 1335633, overlap 1335625 TTGCGAAAAAAGAAA GCAGGGGA ATTT TCCCCTGC TTTTTTTATTTTATA TERM 1403 1335652 - 1335633 - T 100 -13.6 -5.04249 | opp_overlap 1335633 1335625 TTGCGAAAAAAGAAA GCAGGGGA ATTT TCCCCTGC TTTTTTTATTTTATA TERM 1404 1336154 - 1336183 + T 70 -6.5 -4.19506 | TGACACGATAGTAGT GTTTCCATACCTC TAAG GAAGTATTGAAAC TTTTGAGATTACACT TERM 1405 1336840 - 1336854 + T 72 -5.7 -4.45945 | overlap 1336850 CCATATGTTTTTGAG CTCGA AAACC TCGAG TTTTACTTGATCCGT TRQ2_1307 1338117 - 1336819 - | Beta-fructofuranosidase TRQ2_1308 1338889 - 1338119 - | inositol monophosphatase TERM 1406 1338936 - 1338917 - R 80 -9.2 -4.03885 | overlap 1338918 CTTTAAAAAAATTAA CGGCTCCC TTGA GGGAGCCT GCTGGTGGGTGCGGC TERM 1407 1338935 - 1338918 - R 83 -12.7 -3.01247 | overlap 1338917 TTTAAAAAAATTAAC GGCTCCC TTGA GGGAGCC TGCTGGTGGGTGCGG TRQ2_1309 1340002 - 1339046 - | SufBD protein TERM 1408 1339833 - 1339865 + g 73 -10.5 -3.11634 | overlap 1339856 ACACCGTTCTCTATC CTGTGGGGAGTGAGT TCT ACTCCCTCCACACCG TTGAGTCCTATGACC TRQ2_1310 1340730 - 1339999 - | ABC transporter related TERM 1409 1340039 - 1340053 + g 73 -4.2 -4.84359 | TCATTCGGATGATCA CATCTG TCA CAGCTG TTTTTGTAGAACTGC TRQ2_1311 1341380 - 1340763 - | CDP-alcohol phosphatidyltransferase TERM 1410 1341353 - 1341368 + g 86 -9 -4.38712 | opp_overlap 1341346 1341353 TTATCAGAGAAGAAA TCCACC CATC GGTGGA TTTTCTCAGCATGCC TERM 1411 1341368 - 1341353 - G 86 -9 -4.41114 | opp_overlap 1341353, overlap 1341346 TTATCAGAGAAGAAA TCCACC CATC GGTGGA TTTTCTCAGCATGCC TRQ2_1312 1342099 - 1341374 - | nucleotidyl transferase TERM 1412 1342142 - 1342123 - R 100 -13.6 -4.72007 | CTCCACGAAAAGAAA TGAGGGGC TCAA GCCCCTCA CAGCCACTTCGGTTT TRQ2_1313 1343288 - 1342140 - | myo-inositol-1-phosphate synthase TERM 1413 1342812 - 1342822 + g 80 -6.8 -4.63526 | GGCGTACACCTGTGT GGCT GTG AGCC TTTCTTTATCGTTGT TERM 1414 1343534 - 1343519 - H 72 -7.6 -4.09353 | opp_overlap 1343519 1343518 TAGTGAAAAATATAA CGTGAA AAGG TTCACG ATTTGAAAGGAACGA TERM 1415 1343658 - 1343642 - g 74 -5.9 -4.65933 | overlap 1343638 GAGCTTCAAAAGAAA TACAACT TCA AGCTGTA CGGCTCATTGTGTTT TRQ2_1314 1343555 - 1343782 + | hypothetical protein TRQ2_1315 1343775 - 1345340 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein TERM 1416 1345872 - 1345858 - g 75 -2.8 -5.186 | opp_overlap 1345860, overlap 1345860 1345863 GAAAACATAGAAAAA GAGATG AAG CATCTT CTGAAAAACCACGTT TRQ2_1316 1345327 - 1346466 + | protein serine/threonine phosphatase TERM 1417 1346899 - 1346874 - g 74 -8.3 -3.87815 | GGTCATGGTGATAAA CGGTGAGGTCT ATGG AAACCTCACGG CCGATAAGGTGAAAG TRQ2_1317 1346479 - 1346964 + | NADH dehydrogenase (ubiquinone) 24 kDa subunit TRQ2_1318 1346957 - 1348837 + | NADH dehydrogenase (quinone) TRQ2_1319 1348851 - 1350788 + | hydrogenase large subunit TRQ2_1320 1350781 - 1351392 + | Rex DNA-binding domain-containing protein TERM 1418 1351432 - 1351414 - f 93 -11.7 -3.76224 | opp_overlap 1351414 TTTCGAGCGATCAAA GAGGGGG AACAG CCCCCTC TTTTGTGGTATAATT TERM 1419 1351414 - 1351432 + F 100 -11.7 -4.5265 | opp_overlap 1351414 TTTCGAGCGATCAAA GAGGGGG AACAG CCCCCTC TTTTGTGGTATAATT TERM 1420 1352939 - 1352907 - g 72 -5.5 -4.43221 | AAAGATGCGAGAAAA CTGGTGGAAGAGTCC TAC GAAAACTTCAACCAG ATCGTATCCAGAATA TRQ2_1321 1351503 - 1353203 + | methyl-accepting chemotaxis sensory transducer TERM 1421 1353250 - 1353229 - f 100 -17.3 -3.04931 | opp_overlap 1353229, overlap 1353222 TTAGAGAATCAGAGA GCCCTGGGG AATT CCCCAGGGC TTTTCACGTTTGGGG TERM 1422 1353229 - 1353250 + F 100 -17.3 -4.24002 | opp_overlap 1353229 1353222 TTAGAGAATCAGAGA GCCCTGGGG AATT CCCCAGGGC TTTTCACGTTTGGGG TERM 1423 1353560 - 1353545 - g 73 -4.6 -4.82901 | overlap 1353547 1353555 1353556 CGTCTGGGACAAAAA CACGGG AAAA CCCGTC TACAACGCCATCGTG TERM 1424 1353558 - 1353547 - g 71 -7.2 -4.03995 | overlap 1353545 1353555 1353556 TCTGGGACAAAAACA CGGG AAAA CCCG TCTACAACGCCATCG TERM 1425 1354596 - 1354582 - g 73 -7.8 -4.0825 | opp_overlap 1354581 1354584, overlap 1354564 1354561 TTGTGAACGAAACAA CAGCCC TTG GAGCTG CTTACCTTGCAGGAC TRQ2_1322 1353276 - 1354766 + | glycerol kinase TRQ2_1323 1354763 - 1355308 + | glycerol-3-phosphate responsive antiterminator, GlpP TERM 1426 1355368 - 1355329 - f 100 -12.2 -4.64591 | opp_overlap 1355333, overlap 1355331 1355333 GAAGGAGAGAGAAAA GAGAGAGCCATATCCCAC GAGA GTGGGGTATGGCTCTTTT TGTTTAAGGAGGTGC TERM 1427 1355366 - 1355331 - f 100 -14.8 -3.92276 | opp_overlap 1355333, overlap 1355329 1355333 AGGAGAGAGAAAAGA GAGAGCCATATCCCAC GAGA GTGGGGTATGGCTCTT TTTGTTTAAGGAGGT TERM 1428 1355333 - 1355364 + F 100 -19.6 -5.27335 | opp_overlap 1355333 1355331 1355329 GAGAGAGAAAAGAGA GAGCCATATCCCAC GAGA GTGGGGTATGGCTC TTTTTGTTTAAGGAG TERM 1429 1355364 - 1355333 - f 100 -17.4 -3.53768 | opp_overlap 1355333, overlap 1355331 1355329 GAGAGAGAAAAGAGA GAGCCATATCCCAC GAGA GTGGGGTATGGCTC TTTTTGTTTAAGGAG TERM 1430 1356001 - 1355982 - g 74 -8.6 -3.88787 | gap 1 GGATATCGTGATAAA CTGCGCTGG GCT CCA-CGCAG ACGAGATAGCAAAGT TRQ2_1324 1355389 - 1356828 + | FAD dependent oxidoreductase TRQ2_1325 1356840 - 1358036 + | FAD-dependent pyridine nucleotide-disulphide oxidoreductase TRQ2_1326 1358038 - 1358454 + | hypothetical protein TRQ2_1327 1358405 - 1358800 + | CoA-binding domain-containing protein TRQ2_1328 1359287 - 1358757 - | glycerol-3-phosphate responsive antiterminator, GlpP TRQ2_1329 1360054 - 1359272 - | dimethyladenosine transferase TERM 1431 1359992 - 1360006 + g 79 -4.2 -5.1615 | opp_overlap 1359992 1359994, overlap 1359994 ATCGTCCGAAAGAAA GACCTG CCC CAGGTG TTTTTTCAATCTTAC TERM 1432 1359994 - 1360004 + g 74 -6.8 -4.20118 | opp_overlap 1359992 1359994, overlap 1359992 CGTCCGAAAGAAAGA CCTG CCC CAGG TGTTTTTTCAATCTT TRQ2_1330 1361637 - 1360051 - | glycoside hydrolase family protein TRQ2_1331 1362397 - 1361642 - | uncharacterized protein-like protein TERM 1433 1361715 - 1361727 + g 76 -7.7 -4.30995 | overlap 1361712 GAAGGAAATCCGGGT GAGGT AAC ACCTC TTATTTTCTCAACAG TERM 1434 1362897 - 1362883 - g 100 -2.8 -6.20267 | overlap 1362854 1362885 TCAAAAATAAAAAAA TTCTCA CGC TGAGCA ACAGCAAAACACTGC TERM 1435 1363135 - 1363125 - g 77 -6.8 -4.42464 | AATGTTTTAAACAAA GTGG GAA CCAC CACCCTGGCCATTCT TRQ2_1332 1362597 - 1363301 + | initiation factor 2B related TRQ2_1333 1363295 - 1365034 + | aspartyl-tRNA synthetase TRQ2_1334 1365036 - 1365368 + | anti-sigma-factor antagonist TERM 1436 1365739 - 1365726 - g 70 -2.3 -4.91511 | ATGTGACGACAAAAA CATCG TGGT CGAGG GAAGGGATATAGGAA TRQ2_1335 1365370 - 1366032 + | cytidylate kinase TRQ2_1336 1366029 - 1366856 + | hydroxymethylbutenyl pyrophosphate reductase TERM 1437 1367861 - 1367851 - g 80 -5.4 -5.00136 | AAAGAAAACAGAAAA CTCA CTT TGAG CTACAAAAAGGCAAA TERM 1438 1368148 - 1368131 - g 78 -6.3 -4.56153 | gap 1 TCAGCATAAAAAGAA CCCA-GGA AAA TCCATGGG AACGTGCACTCAAAG TRQ2_1337 1366843 - 1368474 + | RNA-binding S1 domain-containing protein TERM 1439 1368594 - 1368577 - g 86 -11.3 -3.82084 | GTCGAAGACGAAGAA GGGGTCA CCCG TGACCCC GTTCAAGATATTGTA TERM 1440 1369002 - 1368979 - g 79 -4.6 -5.11112 | gap 1 AAACTCGAAGAAAAA GGGC-TGGATT TAG AATCAAAGCCC GAAATCACCGACGCA TERM 1441 1369219 - 1369201 - g 72 -8.8 -3.4811 | opp_overlap 1369200, overlap 1369199 GGCTTGAGAAGAAGA TCCAGGGT CGA ACCCAGGA CTGTTGAAAAATACA TRQ2_1338 1368478 - 1369797 + | small GTP-binding protein TRQ2_1339 1369802 - 1370392 + | hypothetical protein TERM 1442 1370389 - 1370377 - f 71 -7.7 -3.83214 | GGAAAGGAAGGTAAA CCTCT TCA AGAGG TGAAAACGTGAAAAA TERM 1443 1370528 - 1370506 - g 75 -11.4 -2.98088 | overlap 1370498 1370508 1370522 GGGCAAAGGGAGATA TATCTTCCGC ACA GCAGAAGATA GAGGAGATCTTCTAC TERM 1444 1370526 - 1370508 - g 70 -9.6 -3.04196 | overlap 1370498 1370506 1370522 GCAAAGGGAGATATA TCTTCCGC ACA GCAGAAGA TAGAGGAGATCTTCT TRQ2_1340 1370397 - 1371986 + | TPR repeat-containing protein TRQ2_1341 1371973 - 1372395 + | TPR repeat-containing protein TERM 1445 1373658 - 1373678 + G 71 -9.7 -3.28712 | opp_overlap 1373654 CTGGTAAACAGGTAG CGGTGCTTG TAC CAACCACCG TTCTGGCAAGACAAC TRQ2_1342 1372388 - 1375069 + | DEAD/DEAH box helicase domain-containing protein TERM 1446 1375067 - 1375094 + T 93 -11.4 -4.2828 | gap 1, opp_overlap 1375067 1375072, overlap 1375072 GACTTACTGAAAAAA TGAAAGGGTGAGC AGG GCTCACCCTT-CG TTTTCATCCATCAGA TERM 1447 1375094 - 1375067 - T 93 -9.2 -5.09895 | gap 1, opp_overlap 1375067 1375072, overlap 1375072 GACTTACTGAAAAAA TGAAAGGGTGAGC AGG GCTCACCCTT-CG TTTTCATCCATCAGA TERM 1448 1375072 - 1375090 + T 100 -14.6 -3.72073 | opp_overlap 1375067 1375072, overlap 1375067 ACTGAAAAAATGAAA GGGTGAGC AGG GCTCACCC TTCGTTTTCATCCAT TERM 1449 1375090 - 1375072 - T 100 -14.6 -4.43669 | opp_overlap 1375072 1375067, overlap 1375067 ACTGAAAAAATGAAA GGGTGAGC AGG GCTCACCC TTCGTTTTCATCCAT TRQ2_1343 1376308 - 1375085 - | RpoD family RNA polymerase sigma factor TRQ2_1344 1378011 - 1376314 - | DNA primase TERM 1450 1378068 - 1378042 - R 100 -11.5 -5.28414 | opp_overlap 1378041 1378040, overlap 1378044 TAACAAACAGAAAAA GAGAGGTCCGG GAGAA CCGGACCCCGC AATTGTCTGCTGCCA TERM 1451 1378066 - 1378044 - R 100 -12.7 -4.23487 | opp_overlap 1378041 1378040, overlap 1378042 ACAAACAGAAAAAGA GAGGTCCGG GAGAA CCGGACCCC GCAATTGTCTGCTGC TRQ2_1345 1378494 - 1378090 - | ribosomal protein S9 TRQ2_1346 1378963 - 1378514 - | ribosomal protein L13 TRQ2_1347 1379507 - 1378956 - | membrane protein-like protein TERM 1452 1378984 - 1379009 + g 74 -6.9 -4.30719 | CTCCTCCCTTCCACT GTTTCCAGTTT AAGG ATACTGGAGAC TTTCTTGTAAACGAA TRQ2_1348 1379763 - 1379512 - | ribosomal protein L27 TRQ2_1349 1380037 - 1379753 - | hypothetical protein TRQ2_1350 1380348 - 1380034 - | ribosomal protein L21 TRQ2_1351 1380821 - 1380477 - | cupin 2 domain-containing protein TRQ2_1352 1381464 - 1380799 - | single-stranded nucleic acid binding R3H domain-containing protein TRQ2_1353 1382807 - 1381476 - | 60 kDa inner membrane insertion protein TRQ2_1354 1383049 - 1382804 - | hypothetical protein TERM 1453 1382847 - 1382837 - G 72 -5.4 -4.4078 | TGGTTTGAATGAAAA TTCC TCG GGAA CAGGATCGTAACCAC TRQ2_1355 1383399 - 1383046 - | ribonuclease P protein component TRQ2_1356 1383530 - 1383396 - | ribosomal protein L34 TRQ2_1357 1384441 - 1383584 - | indigoidine synthase A family protein TRQ2_1358 1384965 - 1384453 - | cob(I)alamin adenosyltransferase TERM 1454 1384714 - 1384732 + g 86 -5.3 -5.48787 | CCTTTCTTTCGCATC GGCAAGA CCGCC TTTTGCC TTTTTTATCTGTTCT TRQ2_1359 1385015 - 1385602 + | small GTP-binding protein TERM 1455 1386630 - 1386619 - g 70 -2.2 -5.06816 | overlap 1386629 AGTCTTGAAGAAAAA GATG AATA CACC CGCGGTCACAGCGAG TERM 1456 1386836 - 1386819 - g 72 -4.8 -4.60487 | overlap 1386807 1386820 GATGATGGTGAAAAA CCACCC TATCAT GGGTGA AGACATACTGAGGGA TRQ2_1360 1385863 - 1387149 + | metal dependent phosphohydrolase TRQ2_1362 1388454 - 1387588 - | degV family protein TRQ2_1361 1387146 - 1387652 + | hypothetical protein TRQ2_1363 1389403 - 1388459 - | ROK family protein TERM 1457 1389256 - 1389273 + g 79 -9.9 -3.81848 | opp_overlap 1389259, overlap 1389259 CATCAGCCACCTCCA GAATCGC TTCG GCGATTC TTCTTATCACATCTT TRQ2_1364 1390703 - 1389420 - | transcription termination factor Rho TERM 1458 1390347 - 1390364 + g 73 -7.7 -4.05629 | TTCGATTTTTATCAT GGCGAAG TACT TTTCGCC TTCTTTCGGTTTCCT TERM 1459 1390782 - 1390751 - R 100 -11.7 -5.30616 | gap 1 GGAGGGAAAGAAAAA GGAGGCAT-CAGCC TTCCT GACTGGATGCCTCC ACAAGCTGAACGAGC TRQ2_1365 1391153 - 1390758 - | ribosomal protein L17 TERM 1460 1390927 - 1390954 + g 93 -10.7 -4.40173 | opp_overlap 1390927 CTGTCTCCAAGCACA GCGTTTATCTG CCTCCT CAGATGAACGC TTTTGGCTTTATCAT TERM 1461 1391073 - 1391098 + g 74 -3.3 -4.99035 | opp_overlap 1391072, overlap 1391074 ACCGTGTTCAACGAT TTCTCTTGAAA GGTT TCTCAAGAGAC TTTTTCTGTGGCTAC TRQ2_1366 1392167 - 1391157 - | DNA-directed RNA polymerase, alpha subunit TERM 1462 1392014 - 1392044 + g 72 -10.5 -2.91668 | opp_overlap 1392014 1392013 1392017, overlap 1392013 CGATTGCGAGAGAAG GTATGGAGGAGAG AAGAA CTCTCCTCAATGC GTTTCCTATCGTGAT TRQ2_1367 1392802 - 1392173 - | RNA-binding S4 domain-containing protein TERM 1463 1392314 - 1392326 + g 76 -4.8 -4.77157 | GCTTCTTTCTTTGTT GGCT TCTAC AGCC TTTTTGATCACTTCG TERM 1464 1392719 - 1392729 + g 71 -6.8 -4.14056 | AAAAGCACACTTATC GGTG TAA CACC TTTCTCCTTTAAGAT TRQ2_1368 1393207 - 1392815 - | ribosomal protein S11 TRQ2_1369 1393603 - 1393226 - | ribosomal protein S13 TERM 1465 1393544 - 1393562 + g 83 -4.4 -5.38549 | AATTCCATAGATGTA GGTCAGCG CCA CCCAGACC TTTTTGTTGTTTGGA TRQ2_1370 1393735 - 1393619 - | ribosomal protein L36 TRQ2_1371 1393977 - 1393753 - | translation initiation factor IF-1 TRQ2_1372 1394731 - 1393979 - | methionine aminopeptidase, type I TERM 1466 1394175 - 1394161 - G 73 -11.4 -2.73875 | opp_overlap 1394161 1394167 1394170, overlap 1394158 1394163 CCTTTCTTAATATCA CACCCG TTC CGGGTG TTCCGTAATTTGGAA TERM 1467 1394161 - 1394175 + g 77 -11.4 -3.1634 | opp_overlap 1394161 1394158 1394163, overlap 1394167 1394170 CCTTTCTTAATATCA CACCCG TTC CGGGTG TTCCGTAATTTGGAA TRQ2_1373 1395390 - 1394728 - | nucleoside-triphosphate--adenylate kinase TERM 1468 1395042 - 1395070 + g 71 -3.9 -4.77757 | CTTCTTCAGGAACTT CAAAGAGTACA GCAGCCG TGAGCTCTTTG TTTTGATTTTTCAAA TRQ2_1374 1396682 - 1395387 - | preprotein translocase, SecY subunit TERM 1469 1396601 - 1396569 - G 71 -10 -3.12351 | gap 1, overlap 1396577 CGCTTCCAGATTCAA TCCAGGAACGGGGAT GTAA ATCCCCA-TCCTGAA AACGATCAAAGCGAG TRQ2_1375 1397127 - 1396684 - | ribosomal protein L15 TRQ2_1376 1397327 - 1397124 - | ribosomal protein L30 TRQ2_1377 1397856 - 1397320 - | ribosomal protein S5 TERM 1470 1397779 - 1397789 + g 74 -6.8 -4.25957 | ACCCTTTGTGACTTT GGAG GTT CTCC TTATTTCTATTATCT TRQ2_1378 1398239 - 1397871 - | ribosomal protein L18 TERM 1471 1398163 - 1398177 + g 73 -4.2 -4.76644 | AGCCTTGGTCTTTCG GGAGTT CCA AACACC TTTTTCCTAACTCTT TERM 1472 1398204 - 1398215 + g 79 -2.2 -5.49729 | TCTTCTGTGCCTTCT GAGT CGCT GCTC TTTTTTTGACTCCTT TRQ2_1379 1398808 - 1398254 - | ribosomal protein L6 TRQ2_1380 1399226 - 1398822 - | ribosomal protein S8 TRQ2_1381 1399427 - 1399242 - | ribosomal protein S14 TRQ2_1382 1399996 - 1399442 - | ribosomal protein L5 TERM 1473 1399498 - 1399471 - G 77 -10.6 -3.3879 | opp_overlap 1399463 1399469 1399467 1399471 1399473, overlap 1399459 1399469 AAGGCATGCCAAAGA GCTCAAGAAGCC TTCT GGCTTCCTGATC TGTCTTTGCAGTTGT TERM 1474 1399473 - 1399496 + g 71 -9.6 -3.19687 | opp_overlap 1399459 1399471 1399469, overlap 1399463 1399471 1399469 1399467 GGCATGCCAAAGAGC TCAAGAAGCC TTCT GGCTTCCTGA TCTGTCTTTGCAGTT TRQ2_1383 1400327 - 1400010 - | ribosomal protein L24 TRQ2_1384 1400708 - 1400340 - | ribosomal protein L14 TRQ2_1385 1401028 - 1400705 - | ribosomal protein S17 TRQ2_1386 1401233 - 1401033 - | ribosomal protein L29 TRQ2_1387 1401658 - 1401230 - | ribosomal protein L16 TERM 1475 1401409 - 1401427 + g 81 -5.3 -5.21709 | gap 1, overlap 1401413 TACCCTTACCTTTTC CCATCCTG GATT CAGG-TGG TTTTTTCGTGTAAGG TRQ2_1388 1402302 - 1401673 - | ribosomal protein S3 TRQ2_1389 1402791 - 1402312 - | ribosomal protein L22 TERM 1476 1402716 - 1402738 + g 78 -5.6 -4.84017 | overlap 1402700 CTTCAATCTTCGGAA GAGAAGACAG GAG CTCTTTTCTC TTTTTATGAAAAATT TERM 1477 1402764 - 1402752 - G 72 -4.9 -4.72272 | TCTTTTTATGAAAAA TTGAA CGC TTCAA ACTGCTTCTGGGTAC TRQ2_1390 1403090 - 1402803 - | ribosomal protein S19 TRQ2_1391 1403934 - 1403104 - | ribosomal protein L2 TRQ2_1392 1404250 - 1403948 - | ribosomal protein L25/L23 TRQ2_1393 1404929 - 1404222 - | ribosomal protein L4/L1e TERM 1478 1404496 - 1404517 + gr 70 -9.5 -2.95073 | overlap 1404495 1404490 TCGGAAAGCTGAAGG TTCTGGAGG ATTT CCTTCAGAA ATTTCGTCTTCGGCC TRQ2_1394 1405573 - 1404950 - | ribosomal protein L3 TERM 1479 1405356 - 1405372 + g 70 -2.2 -5.07567 | overlap 1405357 TCTCTGAGTATTTTC ATCGGT TCCAC ACCGAA TTTTTTGAAGTGTCC TRQ2_1395 1405900 - 1405592 - | ribosomal protein S10 TERM 1480 1405953 - 1405932 - R 89 -10.1 -4.56597 | opp_overlap 1405925, overlap 1405911 1405933 CTCTTTTCTCAAAAA GGAGGGGGA AGCG TCCCCCTCA CTCGATGACTTCTGT TERM 1481 1405952 - 1405933 - R 100 -13.6 -3.33744 | opp_overlap 1405925, overlap 1405911 1405932 TCTTTTCTCAAAAAG GAGGGGGA AGCG TCCCCCTC ACTCGATGACTTCTG TRQ2_1396 1407153 - 1405951 - | translation elongation factor Tu TERM 1482 1406153 - 1406163 + g 72 -5.4 -4.38154 | CTTATGTAGAACTGG GGTT TGT AACC TTTTGTGAACGGTGT TERM 1483 1407125 - 1407138 + g 71 -3.9 -4.86621 | ACGTTAACATGCGGT TTTGT TCTT ACAAA TTTTTCCTTCGCCAT TRQ2_1397 1409252 - 1407165 - | translation elongation factor G TERM 1484 1408465 - 1408498 + g 72 -8.2 -3.75115 | overlap 1408462 TTGGCTTTCGCCGCT CCACAGAGAACGGG AACTGC CCTGTTTTCTATGG TTGCTTTTCTCAAGA TRQ2_1398 1409725 - 1409258 - | ribosomal protein S7 TRQ2_1399 1410120 - 1409737 - | ribosomal protein S12 TRQ2_1400 1410661 - 1410242 - | hypothetical protein TRQ2_1401 1410714 - 1411682 + | PhoH family protein TERM 1485 1412960 - 1412977 + G 71 -9.9 -3.17571 | TCCGACGCGTTCCTT CAGGTTC TCGT GAACCTG TTCAGTTCCAGAATT TRQ2_1402 1411679 - 1413055 + | metal dependent phosphohydrolase TRQ2_1403 1413036 - 1413488 + | hypothetical protein TRQ2_1404 1413443 - 1414663 + | hypothetical protein TRQ2_1405 1414676 - 1415368 + | peptidase membrane zinc metallopeptidase putative TERM 1486 1415435 - 1415459 + G 100 -12.2 -5.00616 | opp_overlap 1415439 1415442 AAAAATTCATATCGA GAGAGGACGT GGACA GCGTCCTCTC TTTTTTGGACGACAG TRQ2_1406 1415365 - 1416660 + | sun protein TRQ2_1407 1417826 - 1416630 - | hypothetical protein TERM 1487 1417148 - 1417136 - G 76 -7.7 -4.32046 | opp_overlap 1417135, overlap 1417146 GTCTGAAAAACGAAA GGAGA AAA TCTCC CATGTTCTCGAGGAA TRQ2_1408 1418296 - 1417904 - | hypothetical protein TERM 1488 1418013 - 1418002 - G 70 -2.2 -5.02074 | overlap 1417984 CGATCTTTGAAAAAA TCCC CCTG AGGA CGTACAGTCCATAAA TRQ2_1409 1418703 - 1418293 - | ferric uptake regulator family protein TRQ2_1410 1419791 - 1418718 - | amidohydrolase TERM 1489 1418826 - 1418788 - G 72 -2.8 -5.02074 | overlap 1418790 TCATTCGGTAAAAAA CGCGGGTGGTGAAGCCCG AAA CGTTCTCCTTCTCCCACG CCAAACCAGAATGAG TERM 1490 1419326 - 1419308 - G 78 -6.6 -4.70659 | TGGCAGAGGCAAAAA GCACTCCG GGT CGGGATGC CACAGTTCCAGCATC TERM 1491 1419621 - 1419631 + g 82 -6.8 -4.76087 | opp_overlap 1419621 TCTCAGAACAACGTA CGGA TCT TCCG TTTCTTTCTTCTCTA TERM 1492 1419702 - 1419715 + g 73 -4.5 -4.89519 | opp_overlap 1419701, overlap 1419703 TCCGATCTCAATCAC TGCTC TTCT GAGCG TTTCTTTTGTATTGT TRQ2_1411 1420952 - 1419792 - | diaminopimelate decarboxylase TRQ2_1412 1422167 - 1420962 - | aspartate kinase TERM 1493 1421768 - 1421787 + g 77 -10.8 -3.46709 | opp_overlap 1421764, overlap 1421767 1421756 CACCCTGAAAGCCCG TTACGACG AGAA CGTCGTAA TCTTTCAGGTTTTCT TERM 1494 1422129 - 1422146 + g 74 -5.5 -4.56597 | overlap 1422117 1422131 TCTCTCTGGTGTGGC AACGGAG CTTC CTCCGTA TTTTTGAACCACCAC TERM 1495 1422131 - 1422144 + g 74 -8.1 -3.90048 | overlap 1422117 1422129 TCTCTGGTGTGGCAA CGGAG CTTC CTCCG TATTTTTGAACCACC TRQ2_1413 1422884 - 1422183 - | tetrahydrodipicolinate succinyltransferase domain-containing protein TERM 1496 1422653 - 1422668 + g 72 -6 -4.41494 | opp_overlap 1422653, overlap 1422640 1422647 GATCCGCCAGAGGAA GCGCGG AGTT CCTCGC TTTTACTTCGAGATG TRQ2_1414 1423536 - 1422886 - | dihydrodipicolinate reductase TRQ2_1415 1424417 - 1423533 - | dihydrodipicolinate synthase TERM 1497 1423719 - 1423734 + g 72 -9 -3.60627 | TTTTCTGTGAACCTC CCTCGA TTTT TCGAGG TTTCCGCTGAAGTAC TRQ2_1416 1425112 - 1424402 - | diaminopimelate epimerase TERM 1498 1424433 - 1424450 + g 76 -4.1 -5.00196 | overlap 1424435 CTTTTCACATCCCCC CTGAGAA AGAT TTCTCCG TTTTCTTCTTTCAGA TRQ2_1417 1426094 - 1425117 - | aspartate-semialdehyde dehydrogenase TERM 1499 1426150 - 1426124 - H 100 -16.7 -5.87996 | GAATTAATAAAAAAA GCGTCTCTTCG CTCCC CGAAGAGACGC CAAATCAGGTCTGAA TERM 1500 1426189 - 1426155 - H 87 -11.6 -3.66883 | opp_overlap 1426163 1426185 CGAAGAGACGCCAAA TCAGGTCTGAAATC TTTTTCT GATTCCAGACCCGA TCGGCTCTCCACGGA TERM 1501 1427499 - 1427511 + H 78 -6.3 -4.69622 | opp_overlap 1427498 1427499 ATTCTTCAGGGAAAC GTTTC TAG GAAAC TTTTTGACCTTCTCT TRQ2_1418 1427621 - 1428037 + | hypothetical protein TRQ2_1419 1429229 - 1427991 - | glycosyl transferase group 1 TRQ2_1420 1430361 - 1429390 - | cysteinyl-tRNA synthetase TERM 1502 1429767 - 1429779 + g 72 -4.8 -4.64844 | CGTTTTGAAGTATCA CCAG CATAT CTGG TTTTCTCTCTCTGAC TRQ2_1421 1430362 - 1432512 + | hypothetical protein TRQ2_1422 1432502 - 1433878 + | hypothetical protein TERM 1503 1433965 - 1433984 + GF 73 -4.4 -4.77157 | TACAAAACCGACGTT TTCAAAGA GTCT TTTTTGAA TTTTTACTGGATTCC TRQ2_1423 1433875 - 1435071 + | hypothetical protein TERM 1504 1435113 - 1435123 + GT 82 -6.8 -4.78107 | GGCTTTTGTTTCAAG GGGA GAA TCCC TTTTTCATAATGATC TERM 1505 1435265 - 1435249 - gT 86 -2.1 -5.61881 | overlap 1435250 TCTCAAAAAGAAAAA GCTCCGC TTC GAGGAGG TGGAAAAACCCCAAA TERM 1506 1435811 - 1435822 + GT 84 -4.4 -5.42259 | TACCCTGAGCTCAGA CAGT TGAA ACTG TTTTTTTCGAAGTCA TRQ2_1425 1437212 - 1435806 - | glycosyl transferase group 1 TRQ2_1424 1435037 - 1435873 + | hypothetical protein TERM 1507 1436367 - 1436381 + gT 78 -8.6 -4.03234 | TCCCACAAATCCCAC CACGAA TCC TTCGTG TTTCTCTGGAGGAAG TERM 1508 1437257 - 1437283 + Tr 81 -6.5 -4.89233 | opp_overlap 1437261, overlap 1437261 TTCATTATACCAGCA AAAAGGCAGGG AAACC CCCTGCCTTCG TTTTTGCTGTTGATA TERM 1509 1437279 - 1437261 - TR 100 -12.4 -4.79223 | opp_overlap 1437257 1437261 TTATACCAGCAAAAA GGCAGGGA AAC CCCCTGCC TTCGTTTTTGCTGTT TERM 1510 1437261 - 1437279 + Tr 93 -11.7 -3.87412 | opp_overlap 1437261, overlap 1437257 TTATACCAGCAAAAA GGCAGGG AAACC CCCTGCC TTCGTTTTTGCTGTT TRQ2_1426 1438071 - 1437301 - | daunorubicin resistance ABC transporter, inner membrane subunit B TRQ2_1427 1439059 - 1438076 - | daunorubicin resistance ABC transporter ATPase subunit TERM 1511 1439104 - 1439085 - R 76 -8 -4.26188 | opp_overlap 1439087 1439089 TCCATAGAGTCAAAA GATATATC GATA GATATATC CTCTGGGATTATAAA TERM 1512 1439327 - 1439308 - R 100 -12.8 -6.01369 | TAAAGAAGAAAAAAA GCCGGGAG ACAA CCCCCGGC TTCAAATTCCCAGTT TRQ2_1428 1440249 - 1439329 - | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding TERM 1513 1439966 - 1439976 + g 72 -3.2 -4.93177 | GCACTAGCACCTGGT GTGT TGA GCAC TTTTATTCCTTTTTC TRQ2_1429 1441409 - 1440255 - | aminotransferase class V TRQ2_1430 1441614 - 1442171 + | ribosome recycling factor TRQ2_1431 1442168 - 1442869 + | undecaprenyl diphosphate synthase TERM 1514 1443011 - 1443023 + G 74 -3.3 -5.05601 | opp_overlap 1443012, overlap 1443005 1443012 ACTTGAAATGAAAGA ACGTG ATG CACGA TTTTTCTATGTGATA TERM 1515 1443022 - 1443012 - g 71 -6.8 -4.15396 | opp_overlap 1443011 1443005 1443012 CTTGAAATGAAAGAA CGTG ATG CACG ATTTTTCTATGTGAT TERM 1516 1443346 - 1443331 - g 76 -9 -3.66772 | overlap 1443334 TGAAATTTGGAAGAA CGAGGA TCTC TCCTCG ATACAGTCCAAGAAA TERM 1517 1443393 - 1443410 + G 80 -5.5 -4.9792 | ATAGGAGGATTCTTG GGTGTTG TCAT CTACACC TTTTTGTATCGACTC TRQ2_1432 1442862 - 1443674 + | phosphatidate cytidylyltransferase TERM 1518 1444842 - 1444815 - g 71 -3.5 -4.82333 | AGAAGAAGGGAAAAA TAGATTCCGAA GACGCG TTCAGACTCTA CGATACATACGGACT TRQ2_1433 1443671 - 1446262 + | alanyl-tRNA synthetase TERM 1519 1446998 - 1446968 - g 87 -6.8 -5.23316 | GAGGAGATCAAAAAA CTGAGGGCTTTGCT GAA AGAAAAGACCGCAG AACGAATAGATGCAA TERM 1520 1447285 - 1447254 - g 73 -7.4 -4.11404 | overlap 1447248 TTGAGATCACAGAAA GGTTCCTGAAGA TCTCCAAT TTTTCAGGAACC AGAGTTATCTACCTT TRQ2_1434 1446269 - 1447321 + | hypothetical protein TRQ2_1435 1448149 - 1447277 - | Hsp33 protein TRQ2_1436 1448814 - 1448146 - | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase TRQ2_1437 1449107 - 1448811 - | hypothetical protein TRQ2_1438 1451489 - 1449114 - | ATPase TERM 1521 1450085 - 1450109 + g 76 -2.1 -5.36314 | opp_overlap 1450077 CCACAACGTTCTCAT CGACAACAGGT TCC ACCTTTTCTTG TTTTTTACTCTTTTC TERM 1522 1451891 - 1451910 + G 77 -3.4 -5.25799 | overlap 1451907 CCTTTGAAAAATCGG CCTCTGCG GTAG CGGTGAGG TTTTTCTCTTCTTTT TRQ2_1439 1451566 - 1452573 + | hypothetical protein TERM 1523 1452569 - 1452550 - T 100 -10.7 -5.80364 | opp_overlap 1452549 1452547 1452550 AGGTTAACAAAAAAA CCGGAGG GAAAAT CCTCCGG CTGATTTTGTGGTGC TERM 1524 1452550 - 1452569 + T 77 -11.4 -2.51535 | opp_overlap 1452550, overlap 1452549 1452547 AGGTTAACAAAAAAA CCGGAGGG AAAA TCCTCCGG CTGATTTTGTGGTGC TERM 1525 1452881 - 1452900 + T 100 -13.6 -5.26119 | opp_overlap 1452881 1452883 GCCGCACCCACCACA GAGGAGCC TTCA GGCTCCTC TTTTCTTTTTCAGAA TERM 1526 1452900 - 1452881 - T 86 -13.6 -2.80816 | opp_overlap 1452881, overlap 1452883 GCCGCACCCACCACA GAGGAGCC TTCA GGCTCCTC TTTTCTTTTTCAGAA TERM 1527 1452898 - 1452883 - T 72 -10.4 -2.95298 | opp_overlap 1452881, overlap 1452881 CGCACCCACCACAGA GGAGCC TTCA GGCTCC TCTTTTCTTTTTCAG TRQ2_1440 1453636 - 1452890 - | methyltransferase type 11 TERM 1528 1453133 - 1453115 - G 88 -7.4 -4.94962 | opp_overlap 1453117 1453126, overlap 1453117 AGAATTGAAAGAAAA GAGTGTGG TTC CCACACTT GTGGTTTGTGTTTTC TERM 1529 1453131 - 1453117 - G 83 -10 -4.08189 | opp_overlap 1453117 1453126, overlap 1453115 AATTGAAAGAAAAGA GTGTGG TTC CCACAC TTGTGGTTTGTGTTT TERM 1530 1453117 - 1453131 + g 79 -10 -3.69613 | opp_overlap 1453115 1453117, overlap 1453126 AATTGAAAGAAAAGA GTGTGG TTC CCACAC TTGTGGTTTGTGTTT TERM 1531 1453126 - 1453137 + g 72 -5.8 -4.45168 | opp_overlap 1453117 1453115, overlap 1453117 AAAAGAGTGTGGTTC CCAC ACTT GTGG TTTGTGTTTTCAAAA TRQ2_1441 1454160 - 1453633 - | methyltransferase TRQ2_1442 1454684 - 1454142 - | dephospho-CoA kinase TERM 1532 1454358 - 1454397 + g 100 -11.7 -4.61162 | gap 2, opp_overlap 1454363, overlap 1454362 1454363 CAGTCCCATTCTTTT CAGAA-GAGCGGCCTC-TA TTAC TACGAGGCCGCTCGTTTTG TTTATTATTTCCTGT TERM 1533 1454362 - 1454392 + g 100 -10.5 -5.20331 | gap 1, opp_overlap 1454363, overlap 1454358 1454363 CCCATTCTTTTCAGA AGAGCGGCCTC-TA TTAC TACGAGGCCGCTCG TTTTGTTTATTATTT TERM 1534 1454391 - 1454363 - G 86 -14 -3.29144 | gap 1, opp_overlap 1454362 1454358 1454363 CCATTCTTTTCAGAA GAGCGGCCTC-TA TTAC TACGAGGCCGCTC GTTTTGTTTATTATT TERM 1535 1454363 - 1454391 + g 100 -14 -3.68538 | gap 1, opp_overlap 1454363, overlap 1454362 1454358 CCATTCTTTTCAGAA GAGCGGCCTC-TA TTAC TACGAGGCCGCTC GTTTTGTTTATTATT TERM 1536 1454550 - 1454540 - G 80 -6.8 -4.59109 | opp_overlap 1454540 CAGATCCTCCAAAAA GCTC GAC GAGC TTTTCCTTCACTTCT TERM 1537 1454540 - 1454550 + g 77 -6.8 -4.46267 | opp_overlap 1454540 CAGATCCTCCAAAAA GCTC GAC GAGC TTTTCCTTCACTTCT TRQ2_1443 1454908 - 1454678 - | hypothetical protein TRQ2_1444 1456251 - 1454905 - | glucose-6-phosphate isomerase TRQ2_1445 1456775 - 1456263 - | adenine phosphoribosyltransferase TRQ2_1446 1457592 - 1456777 - | 4-diphosphocytidyl-2C-methyl-D-erythritol kinase TERM 1538 1457294 - 1457308 + gr 72 -5.6 -4.41633 | CCCCCACCGAGGCCA GAACCC ACC GGGATC TTCTTTTTCAACGTG TRQ2_1447 1458137 - 1457538 - | NUDIX hydrolase TERM 1539 1457658 - 1457678 + gr 70 -6.3 -4.19238 | opp_overlap 1457673 CCATTCGAACAGATC TTTTTCTTT TAC AGAGAAAAA TTTTCCCCTTCCGAG TRQ2_1448 1458527 - 1458138 - | hypothetical protein TRQ2_1449 1459212 - 1458544 - | hypothetical protein TERM 1540 1459035 - 1459046 + g 88 -3.6 -5.7946 | CTGCCTTTACGATCC TGGC TGCA GCCG TTTTTTTCTTCAAAC TRQ2_1450 1460489 - 1459212 - | seryl-tRNA synthetase TERM 1541 1459502 - 1459547 + g 93 -9.7 -4.58663 | gap 1, overlap 1459504 TCGCGGAGGTGAATC CGAGATCTCCCGTACAGAG-CG AAA CGACTCTGTAAGGGAGCTCCAG TTTTTGAAGAATGGT TERM 1542 1459504 - 1459545 + g 73 -10.9 -2.60508 | gap 1, overlap 1459502 GCGGAGGTGAATCCG AGATCTCCCGTACAGAG-CG AAA CGACTCTGTAAGGGAGCTCC AGTTTTTGAAGAATG TERM 1543 1459890 - 1459904 + g 71 -10 -3.12668 | TTCTCTTTTCACCAG GTGTGG AAC CCACAC TTCCGTGTAACCGTG TERM 1544 1460424 - 1460460 + g 74 -6 -4.57353 | opp_overlap 1460413, overlap 1460413 1460426 1460450 TACAGCGGGATCCTC TCCTCGCTTTC-TGAGGG CTT CCTTCACGAAATCG-GGA TTTTGTCTGATGAGC TRQ2_1451 1461287 - 1460517 - | ornithine carbamoyltransferase TERM 1545 1460795 - 1460774 - G 75 -9.5 -3.64716 | overlap 1460772 TCACCCTGTAAAACA CCTGGAAGT CCGT ACTTCCAAG GTCGTAAGCTGCCTC TERM 1546 1461242 - 1461262 + g 78 -4.7 -4.91459 | opp_overlap 1461242 GCAAATAGAAGAACA CCATTGTCA GGA TCACGATGG TTTTTATGAATCTTC TRQ2_1452 1462072 - 1461284 - | binding-protein-dependent transport systems inner membrane component TRQ2_1453 1463175 - 1462069 - | spermidine/putrescine ABC transporter ATPase subunit TERM 1547 1462332 - 1462354 + g 71 -7.1 -4.12043 | gap 1 TCTTTTCGGGTCTAA GGGTGATGAG CAAT CT-ATCACCC TTCTTTGCTTCCTTG TERM 1548 1462736 - 1462704 - G 79 -11.2 -3.35679 | opp_overlap 1462721, overlap 1462705 1462707 GCGGTTCATCGAGAA GGAGGACCCTCGGC TCGTT GGCGAGGGCCCTCG CTATCGCCACTCTCT TERM 1549 1462735 - 1462705 - G 86 -14.7 -2.61264 | opp_overlap 1462721, overlap 1462704 1462707 CGGTTCATCGAGAAG GAGGACCCTCGGC TCGTT GGCGAGGGCCCTC GCTATCGCCACTCTC TERM 1550 1462733 - 1462707 - G 74 -11.5 -2.8474 | opp_overlap 1462721, overlap 1462705 1462704 GTTCATCGAGAAGGA GGACCCTCGGC TCGTT GGCGAGGGCCC TCGCTATCGCCACTC TRQ2_1454 1464200 - 1463190 - | spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein TERM 1551 1464248 - 1464229 - R 100 -11.4 -5.0916 | opp_overlap 1464229 CTTCCAATATAAAAA GCCAGGCC GTGT AGCCTGGC TCTCTGGAGGCGGCG TERM 1552 1464229 - 1464248 + r 75 -10.7 -2.87132 | opp_overlap 1464229 CTTCCAATATAAAAA GCCAGGC CGTGTA GCCTGGC TCTCTGGAGGCGGCG TRQ2_1455 1464972 - 1464367 - | phosphoglycerate mutase TERM 1553 1464850 - 1464862 + g 81 -4.8 -5.17054 | overlap 1464847 ATCGACTCTTTCCAG GCTG TTTGC CAGC TTTTTTGCCTGTTCT TRQ2_1456 1465020 - 1466006 + | hypothetical protein TRQ2_1457 1466400 - 1465984 - | NifU family SUF system FeS assembly protein TRQ2_1458 1467638 - 1466397 - | SufS subfamily cysteine desulfurase TRQ2_1459 1468722 - 1467616 - | FeS assembly protein SufD TERM 1554 1467784 - 1467754 - G 75 -9.8 -3.61902 | GGTCATCAGATAGAA GAGTTCGTCCTC GTCGAGA GAGGAAGAACTC GCAGAGTGTGAAGCG TRQ2_1460 1470127 - 1468733 - | FeS assembly protein SufB TERM 1555 1469015 - 1469039 + g 76 -7.8 -4.208 | AGCTGCACATTCGAC GGAGGCCTTG CTCTT CACGGCTTCC TTTGTGATTTTCAAA TRQ2_1461 1470864 - 1470124 - | FeS assembly ATPase SufC TERM 1556 1471080 - 1471101 + H 91 -11.6 -4.08557 | TCCCCGGCACCACCC GGGCACCT CCAAAA AGGTGCCC TTCTTCTTTGAGGAG TERM 1557 1471482 - 1471462 - g 100 -12.6 -5.55855 | opp_overlap 1471460 1471459 CTGAAAAAAATAAAA GACGGCGA GAAGG TCGCCGTC AGATTTGCATCCTCA TRQ2_1462 1471126 - 1471500 + | hypothetical protein TRQ2_1463 1471765 - 1471481 - | flagellar hook-basal body complex subunit FliE TERM 1558 1471688 - 1471703 + g 86 -4.8 -5.48213 | overlap 1471676 TTCTTTCAGCGCTTC TGAAAA GTTG TTTTCA TTTTTCTTTTGAGTC TRQ2_1464 1472194 - 1471772 - | flagellar basal-body rod protein FlgC TRQ2_1465 1472574 - 1472191 - | flagellar basal-body rod protein FlgB TRQ2_1466 1473619 - 1472591 - | peptide chain release factor 1 TERM 1559 1473462 - 1473486 + g 100 -11.5 -4.94168 | opp_overlap 1473469 TTTTCTCCTTCTTCT CTCAAGAGTTC GAT GAACTCCTGAG TTTCTTTTATTCTGT TRQ2_1467 1474719 - 1473637 - | twitching motility protein TRQ2_1468 1477486 - 1474724 - | isoleucyl-tRNA synthetase TERM 1560 1475056 - 1475074 + g 74 -6 -4.62302 | overlap 1475055 GGGCCTTCAACACGT CTTCTCTT ATG GAGAGGAG TTTTTCGAAATCTTC TERM 1561 1477433 - 1477449 + g 72 -5.2 -4.59853 | GTTCACCAAGTTTGC CTTCAT CGGAA ATGAAG TTTTTGGCAAGTTCA TRQ2_1469 1477855 - 1477505 - | response regulator receiver protein TRQ2_1470 1480127 - 1477860 - | PAS/PAC sensor signal transduction histidine kinase TRQ2_1471 1480563 - 1480069 - | hypothetical protein TRQ2_1472 1480614 - 1482038 + | hypothetical protein TRQ2_1473 1482055 - 1482435 + | positive regulator of sigma E, RseC/MucC TRQ2_1474 1482447 - 1482797 + | DRTGG domain-containing protein TRQ2_1475 1482794 - 1483759 + | putative anti-sigma regulatory factor, serine/threonine protein kinase TRQ2_1476 1483722 - 1484051 + | hypothetical protein TRQ2_1477 1484048 - 1484746 + | phosphotransferase domain-containing protein TERM 1562 1485618 - 1485636 + G 79 -7.5 -4.52589 | AGAACTCCTCACTCT CGAAGAA TTGAT TTCTTCG TTTTCTCTGGACAGG TRQ2_1478 1484740 - 1486149 + | glutamyl-tRNA synthetase TERM 1563 1486654 - 1486627 - g 79 -10.6 -3.52192 | opp_overlap 1486627 TGGAAGCGTACATAA GAGATCCCCTCG TTCA CGACAGGATCTC TTTCAAGCTCGCTTC TRQ2_1479 1486152 - 1486925 + | alpha/beta hydrolase fold protein TRQ2_1480 1486927 - 1487943 + | hypothetical protein TERM 1564 1488037 - 1488025 - g 83 -4.1 -5.33405 | TTGAGGAAATAAAAA GCCTT TCG AAGAC GAATCTGGACAATGC TERM 1565 1488884 - 1488856 - g 100 -11.8 -5.52384 | TCGGCATGAAAAAAA GAGCAGCTTCGA TTTAT TTGAAGCTGCTC CAGAAACAGCCGGAA TRQ2_1481 1487940 - 1488998 + | hypothetical protein TRQ2_1482 1490443 - 1488995 - | inosine-5'-monophosphate dehydrogenase TERM 1566 1489060 - 1489077 + g 83 -9.9 -4.07885 | GTGGATGGCTTTCTT TCACTCC AGCT GGAGTGA TTTTCACGAAGACTG TRQ2_1483 1491693 - 1490455 - | peptidase M16 domain-containing protein TERM 1567 1491640 - 1491619 - GR 86 -8 -4.8622 | gap 1, opp_overlap 1491619 CTTTTTAATTAAAAA GGCGCAGGA GATCG TCC-GCGCC TTGTCGAATGGTATG TRQ2_1484 1493791 - 1491665 - | polyribonucleotide nucleotidyltransferase TERM 1568 1491955 - 1491971 + gr 71 -4.3 -4.64334 | TTTCCCTTATGAGTT CGATGGC CTT GTCAACG TTTTCTTCAGAACTT TERM 1569 1493079 - 1493067 - GR 75 -9.1 -3.57883 | opp_overlap 1493060, overlap 1493058 AGAAGATCTTTGAAA GCCTC AAC GAGGC CTTCAGGTGGTGTGG TERM 1570 1493471 - 1493482 + gr 77 -2.2 -5.40072 | CACGATAACCTGGAC CTCG TTTC TGAG TTTTTTTGGAAAGAG TERM 1571 1493853 - 1493823 - R 77 -8.9 -3.81027 | opp_overlap 1493823, overlap 1493826 1493830 CCCAATCAATTTAAA TCAGGAAGCGGGC AACAA GCCCGCTTCCCCC TCCTTAGAATTTTAT TERM 1572 1493850 - 1493826 - R 100 -17.2 -2.98436 | opp_overlap 1493823, overlap 1493823 1493830 AATCAATTTAAATCA GGAAGCGGGC AACAA GCCCGCTTCC CCCTCCTTAGAATTT TERM 1573 1493846 - 1493830 - R 80 -10.8 -3.33885 | opp_overlap 1493823, overlap 1493826 1493823 AATTTAAATCAGGAA GCGGGC AACAA GCCCGC TTCCCCCTCCTTAGA TRQ2_1485 1494137 - 1493865 - | ribosomal protein S15 TERM 1574 1494242 - 1494217 - R 93 -8.9 -4.95758 | opp_overlap 1494222, overlap 1494222 ATTATACCACAAAAA CATACCCCGGC ATGT GCCGGGTTGTG GAGCGGGCGACGGGA TERM 1575 1494222 - 1494237 + r 85 -11.8 -3.28712 | opp_overlap 1494222 1494217 ACCACAAAAACATAC CCCGGC ATGT GCCGGG TTGTGGAGCGGGCGA TERM 1576 1494237 - 1494222 - R 79 -11.8 -2.7648 | opp_overlap 1494222, overlap 1494217 ACCACAAAAACATAC CCCGGC ATGT GCCGGG TTGTGGAGCGGGCGA TERM 1577 1494274 - 1494290 + r 74 -10.9 -2.62616 | TCGAACCCGCGACCC CCAGCTT GGG AAGCTGG TGCTCTACCAGCTGA TERM 1578 1494511 - 1494535 + r 100 -9.9 -5.35224 | opp_overlap 1494511 1494513 1494514, overlap 1494514 CCAGATCGATATGAA CAGCCCGGCCG TTT TGGCCGGGTTA TTTTGTTTTTATGGG TERM 1579 1494535 - 1494511 - R 71 -9.2 -3.28912 | opp_overlap 1494511 1494514, overlap 1494513 1494514 CCAGATCGATATGAA CAGCCCGGCC GTTTT GGCCGGGTTA TTTTGTTTTTATGGG TERM 1580 1494533 - 1494513 - R 72 -9.6 -3.20841 | opp_overlap 1494511 1494514, overlap 1494511 1494514 AGATCGATATGAACA GCCCGGCC GTTTT GGCCGGGT TATTTTGTTTTTATG TERM 1581 1494532 - 1494514 - R 84 -13.1 -2.52023 | opp_overlap 1494511 1494514, overlap 1494513 1494511 GATCGATATGAACAG CCCGGCC GTTTT GGCCGGG TTATTTTGTTTTTAT TERM 1582 1494514 - 1494532 + r 100 -13.8 -4.72545 | opp_overlap 1494514 1494513 1494511, overlap 1494511 GATCGATATGAACAG CCCGGCCG TTT TGGCCGGG TTATTTTGTTTTTAT TRQ2_1486 1495042 - 1494653 - | hypothetical protein TRQ2_1487 1495787 - 1495095 - | hypothetical protein TRQ2_1488 1496754 - 1495789 - | Rieske (2Fe-2S) domain-containing protein TERM 1583 1496850 - 1496837 - H 74 -3.1 -5.09426 | overlap 1496838 TGGAATTGGAAAAAA CGAGA GTGA TCTCA GAACGGTCGAATGAG TRQ2_1489 1496875 - 1497180 + | hypothetical protein TERM 1584 1497209 - 1497189 - f 72 -9.6 -3.21806 | opp_overlap 1497189 TGAATGAATAGGGAA GCCCGGTC GAAAT GGCCGGGC TTTTTGTTTTTTATG TERM 1585 1497189 - 1497209 + F 100 -12.5 -5.8096 | opp_overlap 1497189 TGAATGAATAGGGAA GCCCGGTCG AAA TGGCCGGGC TTTTTGTTTTTTATG TRQ2_1490 1497543 - 1498145 + | hypothetical protein TERM 1586 1498146 - 1498166 + T 75 -9 -3.64703 | CTTGGTTGGCAGTGA GGTGAGCC TTTGT GGCTTACC TTTGAATCAAAGAAG TERM 1587 1498278 - 1498311 + T 81 -6.1 -4.89477 | opp_overlap 1498282 1498287, overlap 1498281 1498282 AAAATCACTCACAAC CAAAGAAAAGGAGTA GTAA TGCTCCTTTTCGTTA TTTTATTATTAGGAG TERM 1588 1498281 - 1498308 + T 82 -7.8 -4.54297 | opp_overlap 1498282 1498287, overlap 1498278 1498282 ATCACTCACAACCAA AGAAAAGGAGTA GTAA TGCTCCTTTTCG TTATTTTATTATTAG TERM 1589 1498282 - 1498307 + T 83 -11.3 -3.30952 | opp_overlap 1498282 1498287, overlap 1498281 1498278 TCACTCACAACCAAA GAAAAGGAGTA GTAA TGCTCCTTTTC GTTATTTTATTATTA TERM 1590 1498307 - 1498282 - T 80 -9.1 -4.00868 | opp_overlap 1498282 1498281 1498278, overlap 1498287 TCACTCACAACCAAA GAAAAGGAGTA GTAA TGCTCCTTTTC GTTATTTTATTATTA TERM 1591 1498302 - 1498287 - T 72 -3.2 -5.02357 | opp_overlap 1498282 1498281 1498278, overlap 1498282 CACAACCAAAGAAAA GGAGTA GTAA TGCTCC TTTTCGTTATTTTAT TRQ2_1491 1499570 - 1498398 - | major facilitator transporter TRQ2_1492 1501514 - 1499586 - | hypothetical protein TERM 1592 1499988 - 1500005 + g 82 -7.7 -4.63932 | overlap 1499987 TCTTTTCATGGGTAC GAGAGTG TTTT CGCTCTC TTTTATTGACAGGTA TERM 1593 1501083 - 1501095 + g 78 -4.8 -4.98857 | TCCATCTATCACCAT GCTC AAACA GAGC TTTTTGTGCTTCACT TERM 1594 1501472 - 1501453 - G 100 -12.2 -4.43501 | AATTCATCGAGAAAA TCAGCCAG TATC CTGGCTGA AAGACCATATTCATC TRQ2_1493 1503291 - 1501507 - | radical SAM domain-containing protein TERM 1595 1502742 - 1502729 - G 70 -2.3 -5.00616 | CCCGTTTGGAAAAAA CCGTG AATA CAAGG CACGTAAATCCCTTC TERM 1596 1502980 - 1503001 + g 79 -10.3 -3.55801 | opp_overlap 1502979 1502978 CAATGGTATAGAACC TGCTTTCAA TATT TTGAAAGCA TTTAACACGATTCCT TRQ2_1494 1504019 - 1505581 + | hypothetical protein TRQ2_1496 1506478 - 1506146 - | XRE family transcriptional regulator TRQ2_1497 1506849 - 1506601 - | hypothetical protein TRQ2_1498 1508671 - 1506956 - | ABC transporter related TRQ2_1499 1509394 - 1508678 - | ABC transporter related TRQ2_1500 1510216 - 1509404 - | ABC-2 type transporter TRQ2_1501 1511742 - 1510378 - | radical SAM domain-containing protein TRQ2_1502 1513051 - 1511723 - | radical SAM domain-containing protein TERM 1597 1515086 - 1515068 - g 76 -2.4 -5.33785 | overlap 1515073 AATCATCAGAAAAAA TAAAAGGA TTC TCCCTCCA TCAGAGACAAATCCT TERM 1598 1515100 - 1515073 - g 79 -2.1 -5.49579 | gap 1, overlap 1515068 TCAGAAAAAATAAAA GGATTC-TCCCT CCATC AGAGACAAATCC TTTTTCTTACCACCT TERM 1599 1515157 - 1515139 - g 77 -6.8 -4.52589 | CTTCTTGATAGAAAA TTCCTTTC AAG GAAAGAAA GACTCAAAAAGGTAT TRQ2_1503 1514020 - 1515624 + | hypothetical protein TRQ2_1504 1515637 - 1515855 + | hypothetical protein TRQ2_1506 1517812 - 1516118 - | ABC transporter related TERM 1600 1516144 - 1516162 + g 78 -6.7 -4.68424 | opp_overlap 1516144 ATTGACTCCTTACAA TCTCCCT GTAAA GGGGAGA TTTTTCCATGAGTTC TERM 1601 1517091 - 1517075 - G 78 -6.5 -4.58283 | opp_overlap 1517075, overlap 1517063 CAATCCGTTTAAAAA CGGATAG AGA CTCTCCG TTTTCGCCACCACAT TRQ2_1507 1519550 - 1517832 - | ABC transporter related TERM 1602 1518910 - 1518897 - G 70 -5.3 -4.4727 | CGAAGATCCAGAAAA CTGTT TGAG AACAG GAATTCCTTCCACCA TRQ2_1508 1520947 - 1519556 - | radical SAM domain-containing protein TERM 1603 1521025 - 1520993 - R 100 -21.4 -3.14344 | opp_overlap 1520980, overlap 1520980 1521023 1521024 GAGCCTCTTGATGAA CCCCTTCCCCTGGC CTTTC GCCAGGGGAAAGGG AAAAAAGCGGCTGCT TRQ2_1509 1521394 - 1521221 - | hypothetical protein TERM 1604 1522203 - 1522190 - g 74 -3.8 -4.92363 | AAAGATCCAGAAAAA GCCA AAGATA TGGC AGAAGAGGCACTCTA TERM 1605 1522722 - 1522688 - g 70 -5 -4.45545 | overlap 1522690 ATAAAAACAAAAAGA TTGGAGGAAAGACAAA TCC TTTTCCTTTCCACCTA CACGGCTCTTATTGA TRQ2_1510 1521581 - 1523188 + | TPR repeat-containing protein TRQ2_1511 1523285 - 1523503 + | hypothetical protein TRQ2_1512 1523500 - 1523703 + | YcfA family protein TRQ2_1516 1525751 - 1525620 - | hypothetical protein TRQ2_1517 1526629 - 1525823 - | ABC-2 type transporter TRQ2_1518 1527384 - 1526623 - | ABC-2 type transporter TERM 1606 1527134 - 1527155 + gr 70 -5.1 -4.39998 | GGAGCAAGTACCACG GAGATGAGG GCAC CTTCTTCTC TTTCTTCTGTGAATC TERM 1607 1527208 - 1527190 - GR 79 -8.9 -3.9392 | TCCCACCCCAAAGAA GTACTGG TTCAG CCAGTAC CAGAGCAGGGCTCCT TRQ2_1519 1528111 - 1527335 - | ABC transporter related TERM 1608 1527693 - 1527715 + gr 90 -9.9 -4.45693 | overlap 1527710 AACTTTTTCCTCATG CCCGTTGAA AACTC TTCGACGGG TTTGTCTTTGTATTC TRQ2_1520 1529043 - 1528108 - | radical SAM domain-containing protein TRQ2_1522 1530598 - 1529741 - | aldo/keto reductase TERM 1609 1530751 - 1530741 - g 74 -5.4 -4.63932 | TACGCTGTAAGAAAA GGAA GAG TTCC CGGGATCTACAAAAC TRQ2_1523 1530711 - 1531376 + | ribonuclease H TRQ2_1524 1532272 - 1531541 - | beta-lactamase domain-containing protein TRQ2_1525 1534353 - 1532269 - | hypothetical protein TERM 1610 1533265 - 1533278 + g 70 -2.3 -4.94811 | opp_overlap 1533239 1533265 AAGTTTCTGAAAGAC GCGAA ACAC TCCGC TTTCTTTGTTTTTCG TERM 1611 1534868 - 1534828 - g 89 -5.5 -5.6473 | opp_overlap 1534832 1534835, overlap 1534837 AGAATACGAAAAAAA CAAAGAAAAGAGCGTTTTC TAC AAAAACGCTCGATTCTTCT CAACGGAGGAACTGA TERM 1612 1534859 - 1534837 - g 100 -11.4 -5.3472 | opp_overlap 1534835 1534832, overlap 1534828 AAAAAACAAAGAAAA GAGCGTTTTC TAC AAAAACGCTC GATTCTTCTCAACGG TRQ2_1526 1534406 - 1535029 + | methyltransferase type 11 TERM 1613 1535372 - 1535386 + G 73 -7.8 -4.10925 | overlap 1535367 1535381 CCATATCCGTCTTTC CGAGCG GAA CGTTCG TTTTCGAAAGTCTCT TRQ2_1527 1535107 - 1535958 + | cobyrinic acid ac-diamide synthase TRQ2_1528 1535955 - 1536821 + | cobyrinic acid ac-diamide synthase TRQ2_1529 1536834 - 1537184 + | dinitrogenase iron-molybdenum cofactor biosynthesis protein TRQ2_1530 1537189 - 1537476 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein TERM 1614 1538207 - 1538175 - g 79 -9.2 -4.0641 | CCGCATCGATAGAAA CTCCCGCAGCAA GTAGATTCA TCGCTGCAGGAG AAGGAATCGATGCCG TRQ2_1531 1537466 - 1538392 + | radical SAM domain-containing protein TRQ2_1532 1538726 - 1538379 - | cupin 2 domain-containing protein TERM 1615 1539809 - 1539799 - g 82 -6.8 -4.82901 | TCGCTGGTAGAAAAA CTCG GTG CGAG TGCCATCTCAAATTC TERM 1616 1539885 - 1539867 - g 73 -7.4 -4.19238 | overlap 1539870 TCTGGAACTGGAAAA CAATCTGC CAG GCGGATTG AAGGAAAAACTTGCC TERM 1617 1539915 - 1539895 - g 71 -3.3 -4.88407 | overlap 1539896 GGATTGAAGGAAAAA CTTGCCTTT GCA AAAGAAAAG CTCGAAGAGCTAAAA TERM 1618 1539925 - 1539915 - g 85 -6.8 -5.07652 | CTTTGCAAAAGAAAA GCTC GAA GAGC TAAAAATGTTGAAAG TRQ2_1533 1538902 - 1541106 + | 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase TERM 1619 1541240 - 1541264 + T 100 -7.7 -5.82316 | opp_overlap 1541240 1541242, overlap 1541241 1541242 1541262 CAAGGGAAGAATAAA CAGCTCCGGCG CAA TGCCGGAGCGA TTTTTTTTAGATCGT TERM 1620 1541263 - 1541240 - T 89 -10.3 -4.4846 | gap 1, opp_overlap 1541240 1541241 1541242 1541262, overlap 1541242 CAAGGGAAGAATAAA CAGCTCCGGC GCAAT GCCGGAGC-G ATTTTTTTTAGATCG TERM 1621 1541241 - 1541263 + T 91 -11.2 -4.07763 | opp_overlap 1541240 1541242, overlap 1541240 1541242 1541262 AAGGGAAGAATAAAC AGCTCCGGCG CAA TGCCGGAGCG ATTTTTTTTAGATCG TERM 1622 1541262 - 1541242 - T 100 -14 -3.83566 | opp_overlap 1541241 1541240 1541242, overlap 1541240 AGGGAAGAATAAACA GCTCCGGC GCAAT GCCGGAGC GATTTTTTTTAGATC TERM 1623 1541242 - 1541262 + T 89 -14.7 -3.03573 | opp_overlap 1541242 1541240, overlap 1541241 1541240 AGGGAAGAATAAACA GCTCCGGCG CAA TGCCGGAGC GATTTTTTTTAGATC TRQ2_1535 1543105 - 1542110 - | Rieske (2Fe-2S) domain-containing protein TRQ2_1536 1543722 - 1543111 - | hypothetical protein TERM 1624 1544247 - 1544225 - R 74 -10.6 -2.83641 | opp_overlap 1544225 1544226 GAAGTCAGTATCACA GGGCCAAAAG CTC CTTTTGGCCT TTTTGATGGAAAGCC TERM 1625 1544226 - 1544246 + r 100 -14.1 -4.72272 | opp_overlap 1544225, overlap 1544225 AAGTCAGTATCACAG GGCCAAAAG CTC CTTTTGGCC TTTTTGATGGAAAGC TRQ2_1538 1546077 - 1544830 - | glycoside hydrolase family protein TRQ2_1539 1547033 - 1546074 - | ATPase BadF/BadG/BcrA/BcrD type TERM 1626 1547295 - 1547319 + G 100 -11.5 -4.86731 | opp_overlap 1547313, overlap 1547315 1547317 TCTGGGGGATTTCAT GTTTACCCTTG AGA CAAGGGTAGGC TTTTCTTTAAAACCC TRQ2_1540 1547080 - 1547457 + | hypothetical protein TRQ2_1541 1547461 - 1549734 + | MutS2 family protein TERM 1627 1551028 - 1551010 - g 71 -3.8 -4.83759 | overlap 1551011 1551026 AACTAAACGGAAAAA CTCTCTTG AGG CCAAAGAG AAGAACCTCCGTGAA TRQ2_1542 1549731 - 1551725 + | cell division protein FtsA TERM 1628 1551743 - 1551722 - T 100 -10.1 -5.37593 | overlap 1551723 GTTCAAAGTAAAAAA GTGAGGGGG CCGG CCCCCTCAG ATAATAGCCTTCTCC TERM 1629 1551742 - 1551723 - T 100 -13.6 -3.81472 | overlap 1551722 TTCAAAGTAAAAAAG TGAGGGGG CCGG CCCCCTCA GATAATAGCCTTCTC TRQ2_1543 1552843 - 1551740 - | ABC transporter related TERM 1630 1552435 - 1552450 + g 72 -5.4 -4.52589 | TCTGCCTCTGACCAC CTGAGA GCTG TCTCGG TTTTCTGTCGAGCAG TERM 1631 1552745 - 1552778 + g 72 -5.3 -4.56597 | gap 1, opp_overlap 1552745 1552747 1552751, overlap 1552738 1552735 1552747 TGGTCCAAGGAGAAC CACGAA-CTCCTTGTC TTC GACGACGAGATTCGCG TTTTTCACAGCGACG TRQ2_1544 1553109 - 1552846 - | prevent-host-death family protein TERM 1632 1553203 - 1553180 - R 100 -11.8 -5.7946 | opp_overlap 1553180, overlap 1553160 TTTCGAACAAAAAAA CGGGGATATC GAGA AATATCCCCG TTTATTGAAGAATAT TERM 1633 1553180 - 1553203 + r 88 -11.1 -4.16284 | opp_overlap 1553160 1553180 TTTCGAACAAAAAAA CGGGGATAT CGAGAA ATATCCCCG TTTATTGAAGAATAT TRQ2_1545 1553967 - 1553230 - | hypothetical protein TERM 1634 1553983 - 1553946 - G 83 -2.1 -5.69262 | gap 1, opp_overlap 1553975, overlap 1553975 CCACAAAAATAAAAA GAAGAGGAAGGA-ACTTT TTC AAAATATCACTCCCCCTC GAGGAGTTTTTGAAT TERM 1635 1553975 - 1553989 + r 74 -5.6 -4.68994 | opp_overlap 1553946 1553975 TTTTTCAAAATATCA CTCCCC CTC GAGGAG TTTTTGAATGATCCT TRQ2_1546 1555420 - 1553972 - | glutamyl-tRNA(Gln) amidotransferase, B subunit TERM 1636 1554422 - 1554436 + g 72 -8.6 -3.73775 | overlap 1554413 CACACACTCTTCGAA GAACTC GGC GAGTTC TTTACTCGAGGTGAG TRQ2_1547 1556835 - 1555417 - | glutamyl-tRNA(Gln) amidotransferase, A subunit TERM 1637 1556426 - 1556455 + g 71 -7.7 -3.96148 | GATCCTCCACTGCTG CCACCGGGAACTC GCTC GAGATCCCAGGGG TTTCTCGTGGGAAAG TERM 1638 1556501 - 1556520 + g 71 -7.2 -4.08767 | gap 1 GTGCTGGATCCCATC GCGAA-CTC GTC GAGGTTCGC TTTTCCGACGATAAC TRQ2_1548 1557050 - 1557517 + | type IV pilin-related protein TERM 1639 1557534 - 1557562 + F 79 -3.8 -5.28176 | gap 1, opp_overlap 1557533 1557541, overlap 1557541 ACTCCCGCCTGAAAG AGAGAAAGCCCCC GTCC GGGGGC-TTCTGG TTTTTTATAGATCAC TERM 1640 1557556 - 1557541 - f 95 -11.8 -4.27886 | opp_overlap 1557534 1557541, overlap 1557533 CCTGAAAGAGAGAAA GCCCCC GTCC GGGGGC TTCTGGTTTTTTATA TERM 1641 1557541 - 1557556 + F 93 -11.8 -3.83985 | opp_overlap 1557533 1557541, overlap 1557534 CCTGAAAGAGAGAAA GCCCCC GTCC GGGGGC TTCTGGTTTTTTATA TERM 1642 1557575 - 1557589 + F 73 -2.8 -5.12707 | TGGTTTTTTATAGAT CACC CCTGTCT GGTG TTTTTTAAAATTTGA TERM 1643 1558119 - 1558109 - g 72 -3.2 -5.0538 | overlap 1558110 CCTCACCTGAAAAAA CGAA CTT TCCG TTCTACATCGATGAA TERM 1644 1558217 - 1558205 - g 76 -9.1 -3.70902 | CCTTCGAGAGTGAAA CAGCC GAA GGCTG GATACCACGAGGAAA TERM 1645 1558786 - 1558805 + G 70 -10 -3.01712 | opp_overlap 1558786 AGGAACAACATGAAA CCGGTGAA TCTG TTCGCCGG TGTTGAAAACGGCAA TERM 1646 1558805 - 1558786 - g 73 -7.8 -4.01737 | opp_overlap 1558786 AGGAACAACATGAAA CCGGTGAA TCTG TTCGCCGG TGTTGAAAACGGCAA TRQ2_1549 1557661 - 1560723 + | endo-1,4-beta-xylanase TERM 1647 1560724 - 1560751 + T 100 -9.8 -5.47821 | opp_overlap 1560727, overlap 1560726 1560727 AAACTCCTGAAATGA AAAGAAGCCCCC GTCC GGGGGCTTCATA TTTTTTTGAGTGCCT TERM 1648 1560726 - 1560749 + T 100 -12.4 -4.37763 | opp_overlap 1560727, overlap 1560724 1560727 ACTCCTGAAATGAAA AGAAGCCCCC GTCC GGGGGCTTCA TATTTTTTTGAGTGC TERM 1649 1560748 - 1560727 - T 100 -15.9 -4.54727 | opp_overlap 1560726 1560724 1560727 CTCCTGAAATGAAAA GAAGCCCCC GTCC GGGGGCTTC ATATTTTTTTGAGTG TERM 1650 1560727 - 1560748 + T 100 -15.9 -3.21573 | opp_overlap 1560727, overlap 1560726 1560724 CTCCTGAAATGAAAA GAAGCCCCC GTCC GGGGGCTTC ATATTTTTTTGAGTG TRQ2_1550 1561886 - 1560747 - | cystathionine gamma-lyase TRQ2_1551 1562983 - 1561937 - | radical SAM domain-containing protein TERM 1651 1562423 - 1562447 + g 73 -7.9 -4.09243 | ATAGCCGAGTTCCTT CAGGGTGAG AAGACAC CTCACTCTG TTTTCGAAGGATGTG TRQ2_1552 1563236 - 1562991 - | hypothetical protein TERM 1652 1563103 - 1563128 + g 76 -9 -3.70571 | overlap 1563099 1563096 TCAAGGAGGATCTGG GCGGGGAG AAACTTTTCC CTCCCCGC TTTCAGGTCTTTATA TRQ2_1553 1564638 - 1563223 - | biotin and thiamin synthesis associated TERM 1653 1563514 - 1563500 - G 70 -5 -4.41206 | opp_overlap 1563444 1563503 1563513, overlap 1563501 1563513 AAGGATGGGACAAAA CCTTCT TTC AGAAGA CTTCTCATCACCTGG TRQ2_1554 1564976 - 1564644 - | hypothetical protein TERM 1654 1564929 - 1564900 - G 90 -10.7 -4.19735 | opp_overlap 1564896 1564901 1564908, overlap 1564901 TTCTCCAAAACGAAA TCCCCCTCTCC GCTCACCG GGAGAGGGGGT ATACTTCCATCTATC TERM 1655 1564901 - 1564928 + g 84 -14.2 -2.93432 | opp_overlap 1564900 1564901, overlap 1564896 1564908 TCTCCAAAACGAAAT CCCCCTCTCC GCTCACCG GGAGAGGGGG TATACTTCCATCTAT TERM 1656 1564928 - 1564901 - G 85 -14.2 -3.11359 | opp_overlap 1564901 1564896 1564908, overlap 1564900 TCTCCAAAACGAAAT CCCCCTCTCC GCTCACCG GGAGAGGGGG TATACTTCCATCTAT TERM 1657 1564908 - 1564963 + g 100 -12.5 -4.66163 | opp_overlap 1564901 1564900, overlap 1564901 1564896 AACGAAATCCCCCTC TCCGCTCACCGGGAGAGGGGGTATA CTTCCA TCTATCCCCTCCCCCGGTGTCAGGA TTTTTCCCTCCACCT TERM 1658 1564970 - 1564985 + g 72 -6.1 -4.2928 | GTGTCAGGATTTTTC CCTCC ACCTCA GGAGG TTTGTGATTTTTCTC TRQ2_1555 1566197 - 1565034 - | AAA ATPase TERM 1659 1566210 - 1566220 + H 72 -5.4 -4.58303 | overlap 1566214 CATGTTCCTCCCTCC TTCG GAA CGAA TTTTATCATATTTCG TERM 1660 1566322 - 1566306 - H 84 -7.3 -5.00884 | opp_overlap 1566305, overlap 1566289 1566286 ATTTTCGCCAAAAAA CGTTCTA CCA CAGAACG CTCTCTGGAACTTAA TRQ2_1556 1566423 - 1567247 + | phosphate binding protein TERM 1661 1567371 - 1567399 + G 89 -10.9 -4.10925 | overlap 1567378 TGTGAAGGAGGCCTG GCCCGCCCTCG TGAAAGT CGGGGGCGAGC TTTTCACGAGTGTCT TERM 1662 1567587 - 1567607 + G 82 -11.2 -3.56273 | opp_overlap 1567580 TGTAAGGACCACGGT GGAGTTCC TTGCT GGAACTCC TTCTGTGATCATAGG TRQ2_1557 1567297 - 1568124 + | binding-protein-dependent transport systems inner membrane component TERM 1663 1568722 - 1568748 + G 74 -10.8 -3.27475 | opp_overlap 1568722, overlap 1568714 1568713 1568720 GAGCCCTGGGAGAAA CCGCTCCCGT TCTGCTC ACGGGTGCGG TGTTCTACTCAACAG TERM 1664 1568748 - 1568722 - g 84 -10.8 -3.86015 | opp_overlap 1568714 1568713 1568722 1568720 GAGCCCTGGGAGAAA CCGCTCCCGT TCTGCTC ACGGGTGCGG TGTTCTACTCAACAG TRQ2_1558 1568121 - 1568951 + | phosphate ABC transporter, inner membrane subunit PstA TRQ2_1559 1568935 - 1569690 + | phosphate ABC transporter, ATPase subunit TRQ2_1560 1569704 - 1570402 + | phosphate uptake regulator, PhoU TRQ2_1561 1570377 - 1571057 + | two component transcriptional regulator TRQ2_1562 1571044 - 1571997 + | histidine kinase TRQ2_1563 1573825 - 1571990 - | ATPase-like protein TERM 1665 1572407 - 1572420 + g 78 -5.3 -5.01422 | GAAAACGGGCTGGGT GAAAC CGCT GTTTC TTTCTTTTTCTCTCA TRQ2_1564 1575563 - 1573830 - | ABC transporter related TERM 1666 1574972 - 1575004 + gr 70 -10 -2.53846 | gap 1, opp_overlap 1574978, overlap 1574971 TTTCTTCGGTGAACC CGGAAAGTTCCGAGA AGGA TCTCTGAAC-TTCCG ATACTTTTCTGTGTA TRQ2_1565 1576671 - 1575538 - | aminotransferase class I and II TERM 1667 1576031 - 1576017 - GH 76 -8.6 -3.87869 | opp_overlap 1576017 CGAATCCTTCAGAAA CATCGA GTA TCGATG TGAATTCATCCGTGT TRQ2_1566 1576780 - 1577430 + | HAD family hydrolase TRQ2_1567 1579144 - 1577414 - | NAD+ synthetase TERM 1668 1577486 - 1577503 + gT 82 -6.9 -4.79373 | overlap 1577489 TCTCGTGGAGATCTT CACGCCG ATAG CGGCCTG TTTTCTCTTGTATTC TRQ2_1568 1579685 - 1579110 - | hypothetical protein TRQ2_1569 1580623 - 1579688 - | phosphoribosylformylglycinamidine cyclo-ligase TERM 1669 1580352 - 1580342 - G 74 -8.2 -3.9009 | AAGGTAGTCCAGAAA GGCC ACA GGCC TCGCTCCCACGCAGA TRQ2_1570 1581813 - 1580620 - | phosphoribosylamine--glycine ligase TERM 1670 1581099 - 1581118 + g 76 -5 -4.79223 | overlap 1581093 1581101 CTCCCCACAGAGTCT TATCGAAG AGCT CTTCGATC TTTTTGATCGTATCG TERM 1671 1581101 - 1581116 + g 71 -7.6 -4.01045 | overlap 1581093 1581099 CCCCACAGAGTCTTA TCGAAG AGCT CTTCGA TCTTTTTGATCGTAT TRQ2_1571 1583184 - 1581826 - | IMP cyclohydrolase TERM 1672 1582347 - 1582369 + g 74 -5.5 -4.68424 | opp_overlap 1582346 1582347 CCTGTGTGAAGGAAG GTGCCACGA TCACC TCGAGGTAC TTTTTCAATGACTTC TRQ2_1572 1583782 - 1583165 - | phosphoribosylglycinamide formyltransferase TRQ2_1573 1585038 - 1583743 - | amidophosphoribosyltransferase TRQ2_1574 1586848 - 1585043 - | phosphoribosylformylglycinamidine synthase II TRQ2_1575 1587495 - 1586854 - | phosphoribosylformylglycinamidine synthase I TERM 1673 1587210 - 1587192 - G 72 -8.8 -3.65581 | opp_overlap 1587191 1587189 ACGAATTTTGAAGAA GGGCTCCT TTC AGGAGTCC CATCTCTATGAGGAT TRQ2_1576 1587740 - 1587492 - | phosphoribosylformylglycinamidine synthase, purS TRQ2_1577 1588408 - 1587716 - | phosphoribosylaminoimidazolesuccinocarboxamide synthase TERM 1674 1587948 - 1587938 - G 80 -5.4 -5.00616 | opp_overlap 1587938 CGCCCTTTCAAAAAA CTCT TTG AGAG CAAGAGTTATTTTCA TERM 1675 1588518 - 1588501 - H 100 -12.7 -5.44837 | AAAAAAACAGAAAAA CGGGAGC CCTT GCTCCCG TCCCTGGTCGGGGAG TRQ2_1578 1588726 - 1589148 + | hypothetical protein TERM 1676 1589195 - 1589205 + G 74 -5.4 -4.67904 | overlap 1589183 GTCTTCCCAACGCGG GGAA ATC TTCC TTTTTCAACTTCCTG TERM 1677 1589462 - 1589487 + G 73 -10.5 -2.98714 | opp_overlap 1589481, overlap 1589461 ATGTTATAGCCCATG TCGTCCGTCTT TTTG AAGACGGAAGA GTTTCTCATCCGTAT TRQ2_1579 1589158 - 1590240 + | GTP-binding protein YchF TRQ2_1580 1590233 - 1590601 + | acid phosphatase/vanadium-dependent haloperoxidase related TERM 1678 1591580 - 1591562 - g 74 -3.8 -5.00884 | ATGCTTCCGAAAAAA TCCGTTCC AAA AGAACTGA AGCCGGTAAAGAAGG TERM 1679 1591819 - 1591833 + G 70 -5 -4.3898 | overlap 1591807 CGAGAGCGCCCACGT GAAGGA CGT TCTTTC TTTTCTCAGAATCGT TRQ2_1581 1590611 - 1592557 + | UvrD/REP helicase TRQ2_1582 1593629 - 1592562 - | radical SAM domain-containing protein TERM 1680 1592689 - 1592665 - G 82 -12.9 -3.01712 | CTGGTGGTTGGAAGA TCGCTCATCAG GTG CTGAGGAGCGA ACGCAAGGAGAACAA TRQ2_1583 1593785 - 1595047 + | extracellular solute-binding protein TERM 1681 1595053 - 1595072 + F 100 -15 -4.08767 | TCTCTTCTGATACCC GGGGTGGG GATC CCCACCCC TTTTCCGGGGGTGCA TERM 1682 1595098 - 1595109 + G 75 -3 -5.14626 | GTGCACCATGAGAGG GAAA TGGA TTTC TTTTCTTTTGATCCT TRQ2_1584 1595090 - 1595935 + | binding-protein-dependent transport systems inner membrane component TRQ2_1585 1595932 - 1596729 + | binding-protein-dependent transport systems inner membrane component TRQ2_1586 1596743 - 1597810 + | ABC transporter related TERM 1683 1598671 - 1598697 + G 81 -12.4 -3.15961 | opp_overlap 1598670 TTGAAAATGAACGAT CTTCTCTCTGTT TTG AACGGAGAGGAG TTAAGTGATCTTTTC TERM 1684 1600191 - 1600176 - g 74 -3.3 -4.93365 | TCTGAGAACGAAAAA GGAAA TAGAAC TTTCC CTTCAGTATCTGATA TRQ2_1587 1597807 - 1600305 + | glycoside hydrolase family protein TERM 1685 1600577 - 1600560 - g 85 -5.5 -5.27335 | overlap 1600562 TTCTTGAAAGAAAAA GAGGAAG AGCT CTTCCAC ATCCTGAACGAAGCC TERM 1686 1600575 - 1600562 - g 72 -6.7 -4.27026 | overlap 1600560 CTTGAAAGAAAAAGA GGAAG AGCT CTTCC ACATCCTGAACGAAG TRQ2_1588 1600302 - 1601585 + | glycosyl transferase group 1 TERM 1687 1602428 - 1602407 - g 73 -2.3 -5.12707 | gap 1 GGAAACCTCAAAAAA CTCGCAAGAG AAA CCCTTG-AAG AAGTGGAATACATAG TRQ2_1589 1601582 - 1602724 + | glycosyl transferase family protein TERM 1688 1603028 - 1603065 + G 80 -7 -4.70169 | gap 1, opp_overlap 1603031 1603032, overlap 1603031 1603032 TATGAAGAACGTGGA AAAGGCGGTGGAGTGGA TACTC TCCGC-CCACCGCATTC TTTTCTTCGGTGTGG TERM 1689 1603031 - 1603062 + G 81 -8.7 -4.44914 | gap 1, opp_overlap 1603031 1603032, overlap 1603028 1603032 GAAGAACGTGGAAAA GGCGGTGGAGTGGA TACTC TCCGC-CCACCGCA TTCTTTTCTTCGGTG TERM 1690 1603061 - 1603032 - g 70 -10 -3.09429 | gap 1, opp_overlap 1603031 1603028 1603032, overlap 1603031 AAGAACGTGGAAAAG GCGGTGGAGTGGA TACTC TCCGC-CCACCGC ATTCTTTTCTTCGGT TERM 1691 1603032 - 1603061 + G 81 -12.2 -3.25864 | gap 1, opp_overlap 1603032 1603031, overlap 1603031 1603028 AAGAACGTGGAAAAG GCGGTGGAGTGGA TACTC TCCGC-CCACCGC ATTCTTTTCTTCGGT TRQ2_1590 1602708 - 1603508 + | RpiR family transcriptional regulator TRQ2_1591 1603667 - 1605676 + | carbohydrate binding module 27 TRQ2_1592 1605679 - 1607361 + | extracellular solute-binding protein TRQ2_1593 1607414 - 1608394 + | glycosidase PH1107-related TRQ2_1594 1608408 - 1609514 + | ROK family protein TERM 1692 1609744 - 1609725 - g 88 -7.8 -5.05113 | opp_overlap 1609724 TTGAGAGAAACAAAA CGCTCTAC TGGG GTGGAGCG CTGTGGTCTCCTCCA TERM 1693 1610396 - 1610408 + G 71 -6.9 -4.07687 | AGCAACTTCTTCCTG CCGGG TGT TCCGG TTTTGAAGAAAGCAT TRQ2_1595 1609646 - 1611319 + | extracellular solute-binding protein TERM 1694 1611353 - 1611322 - f 89 -8.6 -4.62054 | opp_overlap 1611328, overlap 1611325 1611326 TGAAGCAAAGTAAAA TGATGACCCCGCCC CTCG GGGCGGGGTTTTAA AAAAAGAAGGAGGTA TERM 1695 1611350 - 1611325 - f 74 -10.3 -3.22917 | opp_overlap 1611328, overlap 1611322 1611326 AGCAAAGTAAAATGA TGACCCCGCCC CTCG GGGCGGGGTTT TAAAAAAAGAAGGAG TERM 1696 1611349 - 1611326 - f 86 -13.8 -2.52666 | opp_overlap 1611328, overlap 1611325 1611322 GCAAAGTAAAATGAT GACCCCGCCC CTCG GGGCGGGGTT TTAAAAAAAGAAGGA TERM 1697 1611328 - 1611347 + F 100 -16.4 -4.07568 | opp_overlap 1611326 1611325 1611322 AAAGTAAAATGATGA CCCCGCCC CTCG GGGCGGGG TTTTAAAAAAAGAAG TRQ2_1596 1611375 - 1612364 + | binding-protein-dependent transport systems inner membrane component TRQ2_1597 1612370 - 1613218 + | binding-protein-dependent transport systems inner membrane component TERM 1698 1613423 - 1613401 - g 90 -13.5 -3.53811 | TTGATCCTTTTGAAA CCTCCCATG AAGTA CATGGGAGG AGAAGCGATCCTCGA TRQ2_1598 1613215 - 1614195 + | oligopeptide/dipeptide ABC transporter, ATPase subunit TRQ2_1599 1614192 - 1615139 + | oligopeptide/dipeptide ABC transporter, ATPase subunit TERM 1699 1615236 - 1615221 - g 76 -9 -3.81022 | AAACGGCTACAACAA CGTCTC GGAA GAGACG AGAAAGAAGGTAATC TERM 1700 1615330 - 1615347 + G 72 -9.1 -3.64703 | ACTATAGGAGTTCTC GTCCCCA ACTT TGGGGGC TTTCACTACAACGAG TRQ2_1600 1615141 - 1616127 + | LacI family transcription regulator TERM 1701 1616147 - 1616130 - T 100 -12.7 -4.48877 | opp_overlap 1616130 TAAACAGTTATAAAA GCCCCTC CGGA GAGGGGC TTTTTCATTTTTCCT TERM 1702 1616130 - 1616147 + T 100 -12.7 -5.1971 | opp_overlap 1616130 TAAACAGTTATAAAA GCCCCTC CGGA GAGGGGC TTTTTCATTTTTCCT TRQ2_1601 1617999 - 1616152 - | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein TRQ2_1602 1619118 - 1618012 - | NADH dehydrogenase (quinone) TRQ2_1603 1619638 - 1619111 - | NADH dehydrogenase (ubiquinone) 30 kDa subunit TERM 1703 1619585 - 1619607 + g 73 -7.7 -4.08767 | GTCTATTTCTTCAAC CTCTGGACG GAAAA CTTCCAGAG TTTTCAACGCATCAC TRQ2_1604 1620155 - 1619619 - | NADH-quinone oxidoreductase, B subunit TRQ2_1605 1621049 - 1620168 - | respiratory-chain NADH dehydrogenase subunit 1 TRQ2_1606 1622934 - 1621054 - | NADH dehydrogenase (quinone) TERM 1704 1622370 - 1622408 + g 71 -9.6 -3.18065 | ACCCTATCGAAGTGT CGTTGAGCATACCCTGTG CTA TGCCGTGTATGTTCAACG TTCCATATCTCTGAT TRQ2_1607 1624336 - 1622936 - | NADH/ubiquinone/plastoquinone (complex I) TERM 1705 1623681 - 1623661 - G 71 -7.5 -3.90588 | opp_overlap 1623677, overlap 1623648 1623677 GAGCCGCGAACGAAA CGGCCGTTC CGA GAACGATCG GAGAGATCTCGTTTC TERM 1706 1624338 - 1624377 + r 81 -3.6 -5.33405 | gap 1, overlap 1624340 1624341 AGCAGGCTGATCATT CTTTCACTCCCTTCATCTC TTC GAGATCAAGTGAG-GAGTG TTTTTCTTTGATCCG TRQ2_1608 1624671 - 1624333 - | NADH-ubiquinone oxidoreductase chain 4L TRQ2_1609 1625442 - 1624678 - | Na+/H+ antiporter MnhB subunit-related protein TERM 1707 1624953 - 1624941 - G 72 -4.8 -4.64844 | TCGAGAGATATAAAA GCAG AATCG CTGC GGCTATGACGGTACC TRQ2_1610 1625681 - 1625439 - | hypothetical protein TRQ2_1611 1626001 - 1625678 - | monovalent cation/proton antiporter, MnhG/PhaG subunit TRQ2_1612 1626246 - 1625998 - | multiple resistance and pH regulation protein F TRQ2_1613 1626710 - 1626243 - | cation antiporter TRQ2_1614 1627037 - 1628212 + | extracellular solute-binding protein TERM 1708 1628226 - 1628245 + F 89 -15 -3.09933 | opp_overlap 1628221 1628220 AACATAAAATTTTAC GGGGCTGG GTTT CCAGCCCC TTCCATACGTTCAGG TERM 1709 1629121 - 1629110 - g 73 -2.2 -5.16206 | overlap 1629118 AAATGAAGATAAAAA CCAC AGTA GTGA ACAATCTCACGGGAA TERM 1710 1629185 - 1629199 + G 79 -10 -3.74526 | opp_overlap 1629184 1629183 ATGTGGACGAAAATG GGAACG AGA CGTTCC TTGTTGGATTCATAG TRQ2_1615 1628272 - 1630005 + | binding-protein-dependent transport systems inner membrane component TERM 1711 1630861 - 1630849 - g 70 -4.8 -4.44099 | AACAAATAAGACAAA CTGC GTTGA GCAG CCCGTTTCCTGTGGC TRQ2_1616 1630005 - 1632476 + | binding-protein-dependent transport systems inner membrane component TRQ2_1617 1632491 - 1634311 + | arabinogalactan endo-1,4-beta-galactosidase TRQ2_1618 1634327 - 1635328 + | LacI family transcription regulator TRQ2_1619 1635482 - 1637383 + | extracellular solute-binding protein TERM 1712 1637398 - 1637417 + F 95 -15 -3.17075 | opp_overlap 1637392 ATCATGGAACTTTCG GGGAGGGG TTCC CCCCTCCC TTAACTTGAAAAGAA TRQ2_1620 1637454 - 1638458 + | binding-protein-dependent transport systems inner membrane component TERM 1713 1638721 - 1638734 + G 72 -6.7 -4.32579 | overlap 1638717 AATTCACTCTTGATA GCTGT CATA ACAGC TTTCTTCTCACGTAT TRQ2_1621 1638475 - 1639350 + | binding-protein-dependent transport systems inner membrane component TRQ2_1622 1639372 - 1640331 + | oligopeptide/dipeptide ABC transporter, ATPase subunit TRQ2_1623 1640344 - 1642293 + | Beta-galactosidase TRQ2_1624 1642308 - 1643288 + | oligopeptide/dipeptide ABC transporter, ATPase subunit TERM 1714 1643328 - 1643314 - g 87 -10 -4.20696 | overlap 1643306 CTACGAATGGGAAAA CCCACA GCT TGTGGG TGAAGGAACGGAGAA TERM 1715 1644100 - 1644110 + G 71 -6.8 -4.12279 | GACAGTAAAGCCGGA GGAC AGA GTCC TTTCCTTTGCCTTTG TERM 1716 1645348 - 1645334 - g 74 -5.6 -4.56597 | overlap 1645335 CCCTGGGCGGAAAAA GGCCAC GTT GTGGCG TGGGAGCAGTTCCTT TERM 1717 1645347 - 1645335 - g 70 -9.1 -3.33744 | overlap 1645334 CCTGGGCGGAAAAAG GCCAC GTT GTGGC GTGGGAGCAGTTCCT TERM 1718 1645405 - 1645391 - g 79 -4.3 -5.26316 | GCATTTGAGAAAAAA TCCAT TTCAG ATGGA GTATCACTCAGAGAA TRQ2_1625 1643294 - 1646548 + | glycoside hydrolase family 42 protein TERM 1719 1647983 - 1647969 - g 75 -2.8 -5.11613 | overlap 1647971 AGATCATGGAAAAAA GGTTCT GAA AGAAAC GCTCGAACTCCTCGG TERM 1720 1648140 - 1648126 - g 78 -6.4 -4.60487 | TACCACCTGGAAAAA GAAGGA AAG TCCTCC CTGAAAAAAAGAGTC TRQ2_1626 1646554 - 1648212 + | alpha-galactosidase-like protein TERM 1721 1648403 - 1648386 - g 70 -2 -5.00616 | gap 1, overlap 1648388 CCTTCTCTGAAAAAA GATCCAC CTCCT GTGGA-C TGGAAAGATAAGGGG TERM 1722 1648630 - 1648599 - g 76 -11.7 -2.57931 | overlap 1648598 1648607 TTCATTTTCGAGAAC CGTGGAAAGGAAG TCGGTG CTTCCCTTCCACA CCCGCACGGTCAGAT TRQ2_1627 1648209 - 1649165 + | galactose-1-phosphate uridylyltransferase TERM 1723 1649870 - 1649858 - g 86 -9.1 -4.38712 | GGCACTCTGAGAAAA CGTGC CCA GCACG TGCTCGAAGAAAACG TERM 1724 1650003 - 1649987 - g 71 -9.5 -3.1637 | opp_overlap 1649985 1649990 1649992 1649995 AGAGACCTGTACGAA GTTTCCT GCG AGGAAAC GGATTTCATCGTGGA TRQ2_1628 1649162 - 1650214 + | galactokinase TERM 1725 1650215 - 1650230 + F 100 -10.4 -5.46657 | opp_overlap 1650211 1650215 GTTCAAAAAATCTAA GGGAGC GTGA GCTCCC TTTTTTGTTAAAATG TERM 1726 1650230 - 1650215 - f 77 -10.4 -3.52177 | opp_overlap 1650215, overlap 1650211 GTTCAAAAAATCTAA GGGAGC GTGA GCTCCC TTTTTTGTTAAAATG TERM 1727 1650271 - 1650281 + F 72 -5.4 -4.55295 | overlap 1650257 TTCCAGATTCGGGGG GATC TGC GATC TTTGTTTATCGAACA TRQ2_1629 1650466 - 1651674 + | IS605 family transposase OrfB TERM 1728 1651820 - 1651806 - T 89 -2.8 -5.72254 | TCAAACAATAAAAAA GAATGT GAG ACAGTC CGATATCGTGGTGAG TRQ2_1631 1653239 - 1652229 - | hypothetical protein TERM 1729 1652816 - 1652802 - G 72 -5.6 -4.4078 | TCCGGCGAAGGAAAA CGGCAG AAT CTTCCG GGGATCTTTTATGAA TERM 1730 1653046 - 1653075 + g 76 -5.1 -4.74706 | gap 1, opp_overlap 1653043 1653046 AAATGAAAGAAAGAA GAAGCCTTCTGGAG AAT CTTCA-AAGGGTTC TTTTTCACTCTTCCC TRQ2_1632 1653283 - 1654248 + | hypothetical protein TRQ2_1633 1654253 - 1654459 + | FmdB family regulatory protein TRQ2_1634 1654956 - 1654456 - | methylglyoxal synthase TRQ2_1635 1656880 - 1654949 - | diguanylate cyclase with PAS/PAC sensor TERM 1731 1655671 - 1655687 + g 85 -3.7 -5.52384 | TGAGAGAGGCTGTCA GAACG AAATCCC CGTTC TTTTTTTCGTACAGA TERM 1732 1656348 - 1656336 - G 72 -4.9 -4.57569 | opp_overlap 1656325 CCATTCTGTGAAAAA TTCAA GAT TTGAA ACAATACCCTTTCTT TERM 1733 1656781 - 1656757 - G 74 -5.7 -4.68512 | opp_overlap 1656775, overlap 1656759 CGAGAAGAAAAAGAA CTCTGGGAA GGGCAAT TTCCCAGCG AGTCGCTAAGTGAAT TERM 1734 1656864 - 1656838 - G 72 -5.7 -4.41897 | overlap 1656841 AATAAATGATTAAAA GTACGGTGCCC ACGAG GAGCACCGGCC AGATGAGTTTTTTCA TERM 1735 1656861 - 1656841 - G 74 -10.4 -3.16636 | overlap 1656838 AAATGATTAAAAGTA CGGTGCCC ACGAG GAGCACCG GCCAGATGAGTTTTT TRQ2_1636 1658016 - 1656877 - | aldo/keto reductase TERM 1736 1656958 - 1656990 + g 80 -6.1 -4.81249 | overlap 1656960 ACACTTACTGAGACA TTCGCCGCATTCAAC ACA GAAGGAAGCGGCGGA TTTTTGACTTTCAAA TERM 1737 1658803 - 1658789 - g 100 -4.2 -6.04953 | AGAGAAAGAAAAAAA CTGGAA TTC TACCAG GAAGAAGAAAAGAAG TERM 1738 1659190 - 1659172 - g 79 -7.5 -4.43511 | overlap 1659164 CGAAAAAGAAAAAGA GAATCTC CTTTC GAGATTC AGCGAGAAAGAGAAA TERM 1739 1660205 - 1660192 - g 75 -6.7 -4.48263 | overlap 1660184 GACAGAACAGGAAAA CCTGA AAAA TCAGG AAAAGCTCGTTCAGA TERM 1740 1660396 - 1660381 - g 71 -3.3 -4.73682 | overlap 1660383 CGCGAGAAGAGAAAA GATCT TCGAGG AGATC GACGAGCTGAAGCAG TERM 1741 1660775 - 1660762 - g 70 -2.3 -5.011 | AGGTAAAGAAGAAAA GATGC GAGA GCTTC AGGAAGTAGAAAACA TRQ2_1637 1658090 - 1661602 + | chromosome segregation protein SMC TRQ2_1638 1661605 - 1662144 + | NUDIX hydrolase TERM 1742 1662240 - 1662224 - g 70 -5.1 -4.52589 | TCGGGTGAGAGAAAA CAAAGAG AAT CTCGTTG TGAAGAGAATAGTTA TRQ2_1639 1662141 - 1662734 + | hypothetical protein TERM 1743 1662778 - 1662757 - g 75 -6.7 -4.50241 | gap 1 AAAGATGAAGGAAAA CACCTATCTT GAA AAGAT-GGTG ATGACCGCAAGTCCT TRQ2_1640 1662746 - 1663159 + | flagellar protein FliS TERM 1744 1663926 - 1663946 + G 71 -10.5 -2.73338 | overlap 1663925 AGACGATCCCCTTTC TCGTTCACT CGA AGTGAACGG CTTTCAGAGAGTTCT TRQ2_1641 1663156 - 1663995 + | GCN5-related N-acetyltransferase TERM 1745 1664096 - 1664111 + G 73 -4 -4.82901 | gap 1, opp_overlap 1664089 GTACGGAATTCCTCT CACC-GA GGA TCAGGTG TTTTTGTACAGAGAA TRQ2_1642 1663992 - 1664669 + | HAD family hydrolase TERM 1746 1664703 - 1664688 - T 100 -11.8 -5.26875 | TCGTGAAGTAAAAAA CCCGCC GGGC GGCGGG GAAAGTCACACTTTC TRQ2_1643 1666004 - 1664709 - | hybrid cluster protein TERM 1747 1665146 - 1665170 + g 72 -4.9 -4.66537 | TCTTGAACGGCACAT CGCATCCTCCT ACG ACGAGGAAGTG TTTTATCTTCCCGGC TRQ2_1644 1666096 - 1666698 + | Crp/FNR family transcriptional regulator TERM 1748 1666962 - 1666950 - g 81 -3.3 -5.40072 | GGTCCTCGAAAAAAA GGTGG ATG CCATC GATCAGATATTCAAA TERM 1749 1667611 - 1667595 - g 71 -9.5 -3.29593 | overlap 1667593 AGCCCAGAACGAAGA GATAGAG GCA CTCTATC AGGAGGTCTCGGCGA TRQ2_1645 1666720 - 1668567 + | metal dependent phosphohydrolase TRQ2_1646 1668545 - 1669258 + | short-chain dehydrogenase/reductase SDR TERM 1750 1669284 - 1669268 - T 100 -13.7 -5.63517 | overlap 1669272 CTCTGAAAGAAAAAA GAGGGGC AGA GCCCCTC ACCCGAGAACCTTTT TRQ2_1647 1671754 - 1669283 - | alpha-glucan phosphorylase TERM 1751 1670128 - 1670151 + g 76 -11.8 -2.74501 | opp_overlap 1670127, overlap 1670127 TGTTTTTGAACTCAG GCATCTGCGA GACT TCGTAGATGC GTTTCAAAAATTCCT TERM 1752 1670520 - 1670530 + g 72 -5.4 -4.50976 | ACCCTTCCGAGATAT CTGT CGT ACAG TTTTCTCATCTCACG TERM 1753 1670769 - 1670788 + g 72 -5 -4.64861 | overlap 1670760 1670759 1670765 1670771 TTTTTCTTTTCGAAT CCTTCGAA GAAT TTCGAAAG TTTCTTTTCCACGAG TERM 1754 1671073 - 1671088 + g 73 -4 -4.86773 | overlap 1671075 GGTTGTAAAGGTAGT TGCAGA TCTT TCTGTA TTTTTCCTCGTTTTC TRQ2_1648 1672448 - 1671882 - | hypothetical protein TRQ2_1649 1673569 - 1672445 - | oxygen-independent coproporphyrinogen III oxidase TERM 1755 1672477 - 1672490 + g 72 -5.3 -4.57569 | TGTACCATTCGATCA GATCT TCGA AGATC TTTTTCGACAGGTCC TERM 1756 1673398 - 1673367 - G 76 -8 -4.37092 | overlap 1673353 1673354 1673370 1673385 ATCTTCTCCAGAAAA GAAGGGGGAACA AGGGAAGG TGTTCCCCCACC GAAGTACACCGTCTC TERM 1757 1673395 - 1673370 - G 90 -10.5 -4.30995 | overlap 1673367 1673385 TTCTCCAGAAAAGAA GGGGGAACA AGGGAAGG TGTTCCCCC ACCGAAGTACACCGT TRQ2_1650 1674414 - 1673566 - | pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit TERM 1758 1673661 - 1673674 + g 72 -3.1 -5.08601 | TTCTTGCGAGTTCTT CGAAG GTCT CTTTG TTTTTGTTCACGTAG TERM 1759 1674057 - 1674091 + g 100 -13.6 -4.36554 | opp_overlap 1674057 TCGTGAGACCGTAAA CCTGGTTGTCGTGGAC TAT GTTCACGATATCCGGG TTTCTTCTGATCGTG TRQ2_1651 1676091 - 1674415 - | pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein TRQ2_1652 1677560 - 1676088 - | diguanylate cyclase TRQ2_1653 1678253 - 1677573 - | beta-lactamase domain-containing protein TERM 1760 1677998 - 1678011 + g 74 -3.8 -5.02074 | CGATGTGCATGGCAT GGGT CTTCAC ACCC TTTTTTCCGAGATAA TERM 1761 1678962 - 1678947 - g 89 -4 -5.72053 | overlap 1678954 GAAGGAAAGAAAAAA GAGAAT ATCT ACTCTC TCATGGTGATAGATA TERM 1762 1679465 - 1679440 - g 70 -9.7 -3.01712 | overlap 1679442 GTTCTGCGGGTAACA CAGGAGCGCAG ATAT CTGCACTCATG ATAAGAGGATTCACA TRQ2_1654 1678461 - 1679801 + | response regulator receiver protein TERM 1763 1679877 - 1679889 + G 80 -6.9 -4.70511 | opp_overlap 1679877 1679876 GTGCTGTTTTCAAAT GCCCT TCT GGGGC TTCTTTTCTTTTTCC TRQ2_1655 1679814 - 1680734 + | esterase/lipase-like protein TERM 1764 1681026 - 1681040 + GT 77 -10 -3.48276 | GCCGGGAAACTTCAC CCGTGT AGC ACACGG TTCTGTGAGCGGAAA TRQ2_1657 1682325 - 1681603 - | hypothetical protein TRQ2_1656 1680739 - 1681683 + | hypothetical protein TRQ2_1658 1683021 - 1682338 - | glutamine amidotransferase class-I TERM 1765 1682376 - 1682388 + g 71 -3.3 -4.76041 | opp_overlap 1682366 1682376, overlap 1682366 AAAGAGACCTCAAGA GGCCT TTC AGGAC TTTTTCCTCCCTCTC TRQ2_1659 1683820 - 1683023 - | hypothetical protein TERM 1766 1683116 - 1683139 + g 95 -7.4 -5.28176 | AACTATATTCCCTTC GATGGTCTTC AAAA GAAGTCCGTC TTTTTTATCGATGAA TRQ2_1660 1684200 - 1683817 - | phage shock protein C, PspC TERM 1767 1684415 - 1684443 + G 74 -10.3 -3.21276 | overlap 1684413 1684430 1684431 1684432 AAAAGAAAGCTCATT CCCGCTTTGAACA GGT TGTTCGAGGCAGG TATTCTGCCCGAACG TERM 1768 1684430 - 1684459 + G 80 -5.7 -4.93968 | gap 1, overlap 1684415 1684413 1684431 1684432 CCCGCTTTGAACAGG TTGTTCGAGGCAGG TAT TCTGCC-CGAACGC TTTTTCGTTCTCGGT TERM 1769 1684431 - 1684458 + G 72 -9.2 -3.55296 | gap 1, overlap 1684415 1684413 1684430 1684432 CCGCTTTGAACAGGT TGTTCGAGGCAGG TAT TCTGCC-CGAACG CTTTTTCGTTCTCGG TERM 1770 1684432 - 1684457 + G 71 -10.5 -2.72455 | gap 1, overlap 1684415 1684413 1684431 1684430 CGCTTTGAACAGGTT GTTCGAGGCAGG TAT TCTGCC-CGAAC GCTTTTTCGTTCTCG TRQ2_1661 1684289 - 1685779 + | glucose-6-phosphate 1-dehydrogenase TERM 1771 1685859 - 1685845 - g 76 -5 -4.7889 | ACAAAGATGGAAAAA CTTCTC GAG GAAAAG GATAAGATCTTCGTC TERM 1772 1686296 - 1686306 + G 71 -6.8 -4.11183 | opp_overlap 1686295 GTGCACTGAACACAT CACG GTA CGTG TTCTTTCTCATCAGG TRQ2_1662 1685764 - 1686426 + | 6-phosphogluconolactonase TERM 1773 1686567 - 1686578 + G 75 -3 -5.11836 | TTTTGGCTTTCGTCG GAAT GATC ATTC TTTTGTTTTACATCT TRQ2_1663 1686494 - 1687357 + | binding-protein-dependent transport systems inner membrane component TRQ2_1664 1687354 - 1688325 + | oligopeptide/dipeptide ABC transporter, ATPase subunit TRQ2_1665 1688312 - 1689289 + | oligopeptide/dipeptide ABC transporter, ATPase subunit TRQ2_1666 1689305 - 1690810 + | extracellular solute-binding protein TERM 1774 1690836 - 1690815 - f 91 -12.9 -3.2218 | opp_overlap 1690816, overlap 1690816 GGGAAGAGTGAGTAA TGCCGCCCC CCTG GGGGCGGCT TTCTGGAGGTGCCGT TERM 1775 1690816 - 1690835 + F 100 -16.4 -3.87815 | opp_overlap 1690815 1690816 GGAAGAGTGAGTAAT GCCGCCCC CCTG GGGGCGGC TTTCTGGAGGTGCCG TERM 1776 1690835 - 1690816 - f 100 -16.4 -2.52987 | opp_overlap 1690816, overlap 1690815 GGAAGAGTGAGTAAT GCCGCCCC CCTG GGGGCGGC TTTCTGGAGGTGCCG TRQ2_1667 1690853 - 1691860 + | binding-protein-dependent transport systems inner membrane component TERM 1777 1691882 - 1691864 - T 100 -12.4 -4.26188 | GTGAGATATTGAAAA GAGCGGGA AGG CCCCGCTC ACAGTAATTTTTCGA TRQ2_1668 1693080 - 1691881 - | isocitrate dehydrogenase, NADP-dependent TERM 1778 1693241 - 1693214 - R 93 -10.6 -4.58685 | opp_overlap 1693218 1693220, overlap 1693220 AAATCGTTGCAAAAA GTAAAAGGGTGC GGAA GCACCCTCTTTC ATTTAACGAGCAGAA TERM 1779 1693218 - 1693237 + r 74 -7.8 -4.05788 | opp_overlap 1693214 1693220, overlap 1693220 CGTTGCAAAAAGTAA AAGGGTGC GGAA GCACCCTC TTTCATTTAACGAGC TERM 1780 1693235 - 1693220 - R 91 -10.4 -4.77757 | opp_overlap 1693218 1693220, overlap 1693214 TTGCAAAAAGTAAAA GGGTGC GGAA GCACCC TCTTTCATTTAACGA TERM 1781 1693220 - 1693235 + r 78 -10.4 -3.62354 | opp_overlap 1693220 1693214, overlap 1693218 TTGCAAAAAGTAAAA GGGTGC GGAA GCACCC TCTTTCATTTAACGA TRQ2_1669 1693899 - 1693240 - | thioredoxin-related protein-like protein TERM 1782 1693586 - 1693567 - G 72 -5 -4.56597 | TTTTCCCTTGAAAAA GAAAAACG TAGG CGTTCCTC TCACACCAAATCCAG TRQ2_1670 1694565 - 1693915 - | cytochrome c biogenesis protein transmembrane region TERM 1783 1694647 - 1694625 - R 74 -7.6 -4.25389 | overlap 1694627 ATTATAACACAGAAA CACCCCCTCA CAG CGAGGGGGCT AACGATTCAGTTTGA TERM 1784 1694645 - 1694627 - R 100 -12.4 -3.71649 | overlap 1694625 TATAACACAGAAACA CCCCCTCA CAG CGAGGGGG CTAACGATTCAGTTT TRQ2_1671 1695301 - 1694654 - | CBS domain-containing protein TRQ2_1672 1696033 - 1695314 - | ABC transporter related TRQ2_1673 1696880 - 1696026 - | ABC transporter related TRQ2_1674 1697953 - 1696877 - | inner-membrane translocator TERM 1785 1697824 - 1697793 - G 72 -8.9 -3.58343 | gap 1 TTTATCAGGTTCAAA CTCACCGCCATGAT CCCGT AT-ATGGCGATGAG TCGCACCACCCTCAG TRQ2_1675 1698852 - 1697953 - | inner-membrane translocator TERM 1786 1698562 - 1698549 - G 84 -8.1 -4.73297 | CAAGGAAGAAAGAAA CACCG ATAG CGGTG ATAAGAGCGGAAATC TERM 1787 1698906 - 1698884 - R 100 -17 -4.56702 | opp_overlap 1698884 CTTCAATCAAAGAAA GCGAAGCCCC TGA GGGGCCTCGC TTTTGCTTGTTTTAA TERM 1788 1698884 - 1698906 + r 100 -14.8 -4.67123 | opp_overlap 1698884 CTTCAATCAAAGAAA GCGAAGCCCC TGA GGGGCCTCGC TTTTGCTTGTTTTAA TRQ2_1676 1700043 - 1698931 - | extracellular ligand-binding receptor TRQ2_1677 1701383 - 1700127 - | hypothetical protein TRQ2_1678 1702611 - 1701373 - | hypothetical protein TRQ2_1679 1703525 - 1702608 - | ATPase TRQ2_1680 1703685 - 1704920 + | GntR family transcriptional regulator TERM 1789 1705000 - 1704979 - g 91 -8 -5.22943 | AGGAAAGGGAAAAAA GCTCGCAG TTGCGG CTGCGAAC GATGATCACGTGATA TRQ2_1681 1704932 - 1705816 + | phosphate acetyltransferase TRQ2_1682 1706466 - 1705813 - | adenosylhomocysteine nucleosidase TERM 1790 1706491 - 1706505 + r 70 -9.2 -3.18511 | opp_overlap 1706491 TCCAGATGAGAAAAA GGGGCG CAG TGCCCC TTCACTCTCTCTGTC TERM 1791 1706505 - 1706491 - R 91 -8.5 -4.95155 | opp_overlap 1706491 TCCAGATGAGAAAAA GGGGC GCAGT GCCCC TTCACTCTCTCTGTC TRQ2_1683 1706998 - 1706507 - | ferroxidase TRQ2_1684 1707097 - 1708926 + | FG-GAP repeat-containing protein TRQ2_1685 1708923 - 1709321 + | hypothetical protein TRQ2_1686 1709315 - 1709809 + | hypothetical protein TERM 1792 1709797 - 1709785 - f 71 -2 -5.0538 | opp_overlap 1709785, overlap 1709786 TCTGAGGGTAAAAAA TTCT CTTCC AGAA GTTCTGGAGTGATAC TRQ2_1687 1709816 - 1710793 + | hypothetical protein TRQ2_1688 1710803 - 1711234 + | hypothetical protein TRQ2_1689 1711247 - 1711549 + | hypothetical protein TRQ2_1690 1711560 - 1712867 + | hypothetical protein TERM 1793 1712923 - 1712935 + F 71 -4.1 -4.84363 | CATCGTTTTGATGAT TGTTC TGG GGACA TTTTTCATCGTTTCG TERM 1794 1713169 - 1713154 - f 70 -2.6 -4.89009 | gap 1, opp_overlap 1713154 ACAGGGAAGGAAAAA CACT-GA TCC TCGAGTG TTTTGATGGGGGAAA TRQ2_1692 1713454 - 1713807 + | flagellar protein FlaG protein TRQ2_1693 1713804 - 1715639 + | flagellar hook-associated 2 domain-containing protein TRQ2_1694 1716470 - 1715640 - | binding-protein-dependent transport systems inner membrane component TERM 1795 1716224 - 1716190 - G 70 -2 -5.04325 | overlap 1716196 TTGAAATGAGAAAAA GCGAAACCTGCGAGCG CTC CGGTGGCAAGTTTTCC AAGTGTTATCAGTGA TERM 1796 1716409 - 1716393 - G 71 -7.3 -4.1822 | opp_overlap 1716396, overlap 1716396 GGTTATCGCAAGAAA CAATGGC AGA GCCATTA TGAAAGTCACCATTA TERM 1797 1716406 - 1716396 - G 74 -6.8 -4.21438 | opp_overlap 1716396, overlap 1716393 TATCGCAAGAAACAA TGGC AGA GCCA TTATGAAAGTCACCA TRQ2_1695 1717350 - 1716484 - | binding-protein-dependent transport systems inner membrane component TERM 1798 1716538 - 1716526 - G 71 -7.7 -3.84017 | opp_overlap 1716523 GAATTTGAAATAGAA GATCG TAA CGATC GCCATTATCAGAAAG TERM 1799 1717402 - 1717376 - R 100 -12.3 -3.78785 | opp_overlap 1717372, overlap 1717377 1717379 CCAGAAAAATGATAA GGAGTGAGGGG GAACA CCCCTCACTCA TAGAGTTCATTGTAT TERM 1800 1717401 - 1717377 - R 100 -15.8 -2.86187 | opp_overlap 1717372, overlap 1717376 1717379 CAGAAAAATGATAAG GAGTGAGGGG GAACA CCCCTCACTC ATAGAGTTCATTGTA TERM 1801 1717399 - 1717379 - R 82 -12.6 -2.95938 | opp_overlap 1717372, overlap 1717377 1717376 GAAAAATGATAAGGA GTGAGGGG GAACA CCCCTCAC TCATAGAGTTCATTG TRQ2_1696 1718706 - 1717396 - | extracellular solute-binding protein TERM 1802 1718250 - 1718278 + g 77 -10.3 -3.4072 | overlap 1718255 GAGGTTTGTTTGGAT CGAGACCCACTTC TTT GAAGAGGGTTTTG TTGTAGTAGAGAATC TERM 1803 1718255 - 1718273 + g 93 -8.8 -4.81212 | overlap 1718250 TTGTTTGGATCGAGA CCCACTTC TTT GAAGAGGG TTTTGTTGTAGTAGA TERM 1804 1718770 - 1718752 - H 100 -10.3 -5.75538 | opp_overlap 1718752 TTGAAAAAACAAAAA GCAACCC ATCCA GGGTTGC TTCTCTAGTTCTCCC TERM 1805 1718752 - 1718770 + H 78 -10.3 -3.62644 | opp_overlap 1718752 TTGAAAAAACAAAAA GCAACCC ATCCA GGGTTGC TTCTCTAGTTCTCCC TRQ2_1697 1718939 - 1719988 + | SARP family transcriptional regulator TERM 1806 1720041 - 1720006 - T 91 -7.5 -5.25893 | overlap 1720008 ACACAGATCAAAAAA TAGCGCCGCTGTCTC GCATTT GAAGCAGCGACGCTC AAAGAAATGTGGTTA TERM 1807 1720039 - 1720008 - T 85 -10.1 -4.24891 | overlap 1720006 ACAGATCAAAAAATA GCGCCGCTGTCTC GCATTT GAAGCAGCGACGC TCAAAGAAATGTGGT TERM 1808 1720108 - 1720098 - T 70 -5.4 -4.38129 | AGAGAAGGATCAAAA TGAG TAC CTCA CCCCAACGAAAATCT TRQ2_1698 1721201 - 1720092 - | hypothetical protein TRQ2_1699 1722361 - 1721198 - | type II and III secretion system protein TRQ2_1700 1723983 - 1722358 - | hypothetical protein TERM 1809 1724032 - 1724012 - R 100 -14 -5.34857 | opp_overlap 1724012 CCAAACAAAATAAAA GGCGAGGG GAGGA CCCTCGCC TTCTCTTTCTGAAGA TERM 1810 1724012 - 1724032 + r 100 -14 -3.89695 | opp_overlap 1724012 CCAAACAAAATAAAA GGCGAGGG GAGGA CCCTCGCC TTCTCTTTCTGAAGA TRQ2_1701 1724704 - 1724051 - | hypothetical protein TRQ2_1702 1725425 - 1724748 - | hypothetical protein TRQ2_1703 1726383 - 1725445 - | hypothetical protein TERM 1811 1726471 - 1726448 - H 72 -5.4 -4.53439 | overlap 1726438 TGAAATTGAAAGAAA TTTTCAATGA GTGT TCAATGAAAA AACAATAAAAACTGA TERM 1812 1726717 - 1726695 - g 72 -10.6 -2.90956 | opp_overlap 1726699 1726712 1726712, overlap 1726698 AAAGTACGTCATAGA GAAGGGTGAC CTC GTCACCTTTC CGAAGGGTTTGAGGT TERM 1813 1726699 - 1726713 + G 75 -10 -3.54935 | opp_overlap 1726698 1726695, overlap 1726712 1726712 TACGTCATAGAGAAG GGTGAC CTC GTCACC TTTCCGAAGGGTTTG TRQ2_1704 1726513 - 1726782 + | protein of unknown function DUF861 cupin_3 TERM 1814 1727082 - 1727092 + F 86 -3.2 -5.48213 | overlap 1727046 GAAGTCGACGGTGGG TGCG TGG TGCA TTTTTCTTTTGGCTA TRQ2_1705 1727133 - 1727534 + | hypothetical protein TRQ2_1706 1728128 - 1727526 - | Na+/H+ antiporter MnhB subunit-related protein TRQ2_1707 1728793 - 1728125 - | hypothetical protein TRQ2_1708 1729026 - 1728790 - | hypothetical protein TERM 1815 1728949 - 1728966 + g 72 -2.7 -5.00616 | opp_overlap 1728965 AATTCCTATGAGATG GATTTTC AGAA GGAAGTC TTTTTTCAGAAGCGA TRQ2_1709 1729265 - 1729023 - | hypothetical protein TRQ2_1710 1729633 - 1729262 - | hypothetical protein TRQ2_1711 1730970 - 1729612 - | NADH/ubiquinone/plastoquinone (complex I) TERM 1816 1729980 - 1729967 - G 72 -5.2 -4.57837 | AGATTCTTCGAAAAA CCCG CAAGGC CGGG AAGTCCCATGATAGA TERM 1817 1730237 - 1730226 - G 70 -2.2 -4.96468 | GAAAGGCAAACAAAA CACC TGAA AGTG CCGAAAAGATGGCAA TRQ2_1712 1731287 - 1730967 - | NADH-ubiquinone oxidoreductase chain 4L TRQ2_1713 1732237 - 1731284 - | radical SAM domain-containing protein TERM 1818 1731799 - 1731812 + g 80 -6.7 -4.78764 | TCAGATGAACACTGA GAACG AATC CGTTC TTTTTGATGAGTTTG TRQ2_1714 1732956 - 1732234 - | ribonuclease III TRQ2_1715 1733506 - 1732943 - | phosphodiesterase TERM 1819 1733047 - 1733037 - G 74 -6.8 -4.371 | overlap 1733031 TCGATGATACCAAAA GTCG GAC CGAC CTCAGATTTTGGAAG TRQ2_1716 1734609 - 1733509 - | ABC-2 type transporter TRQ2_1717 1735195 - 1734602 - | dTMP kinase TERM 1820 1734743 - 1734753 + g 80 -5.4 -5.00884 | TTCCCTTACATGTTC GAGA AAC TCTC TTTTTTCAAAGCGGT TERM 1821 1735464 - 1735436 - R 87 -5.3 -5.42259 | overlap 1735437 TCAGTTTCAAAAAAA CTCCCCTGAAGAA CAA TTCTTCCGAGAAA GGAGACAGAAAAACC TRQ2_1719 1736720 - 1735779 - | ornithine carbamoyltransferase TERM 1822 1735976 - 1735992 + g 100 -8.7 -5.10033 | CCTGATAAGGCTTTA GGAGGGA TAT TCTCTCC TTTTCTTTGTCTTCC TRQ2_1720 1737917 - 1736724 - | adenylosuccinate synthase TERM 1823 1737288 - 1737319 + g 91 -11.1 -4.19746 | gap 1, opp_overlap 1737275, overlap 1737284 1737290 AAGAACCCCCTGTGT TCCTTCGAAGAGAA CGCTC TTCTCTTCG-AGGA TTCTTTTCAACTGGA TERM 1824 1737290 - 1737318 + g 80 -12.6 -3.11366 | overlap 1737284 1737288 GAACCCCCTGTGTTC CTTCGAAGAGAA CGCTC TTCTCTTCGAGG ATTCTTTTCAACTGG TRQ2_1721 1739218 - 1737923 - | adenylosuccinate lyase TERM 1825 1737983 - 1738003 + g 83 -10.5 -3.73968 | opp_overlap 1737981 1737977 1737986, overlap 1737980 1737986 GTAGTAAGAGATATC GAAGAGTTC TTC GAGCTCTTC TTTGGTAACCAGTTT TERM 1826 1738030 - 1738055 + g 77 -9 -3.92577 | overlap 1738028 GTTTCTTAACCTCTT CATCCTCGAG GAGGTA CTCGAGGAAG TGTTTTTCGGAATTC TRQ2_1722 1740952 - 1739633 - | RNA methyltransferase TRQ2_1723 1742596 - 1740956 - | arginyl-tRNA synthetase TERM 1827 1742204 - 1742228 + g 83 -10.8 -3.67417 | gap 1 GATCTGTCTACCGTG CCCAACGGTGA ATGG TC-CCGTTGGG TTTGCACTTCCGTAT TRQ2_1724 1743464 - 1742634 - | hypothetical protein TERM 1828 1742803 - 1742834 + g 74 -8.2 -3.90112 | opp_overlap 1742818 CTTTTCCCTCGGTAA GTTTTTCCAAGA AAAGTTCC TCTTGGAGAAAC TTTGATTCCAAAAAC TERM 1829 1742834 - 1742818 - G 80 -7.3 -4.63218 | opp_overlap 1742803 GTTTTTCCAAGAAAA GTTCCTC TTG GAGAAAC TTTGATTCCAAAAAC TRQ2_1725 1743978 - 1743457 - | hypothetical protein TERM 1830 1743527 - 1743513 - G 78 -5.6 -4.87786 | overlap 1743514 TCAACTCCAGAAAAA CGGGAG CTA CTCCCT CTGCCACGACCCCCG TERM 1831 1743526 - 1743514 - G 72 -9.1 -3.51948 | overlap 1743513 CAACTCCAGAAAAAC GGGAG CTA CTCCC TCTGCCACGACCCCC TRQ2_1726 1745268 - 1744006 - | histidyl-tRNA synthetase TRQ2_1727 1746752 - 1745265 - | TrkH family potassium uptake protein TRQ2_1728 1747427 - 1746771 - | TrkA domain-containing protein TERM 1832 1746842 - 1746856 + g 70 -10 -2.97747 | CGTACAGTTTATCAC CGGAGA GGA TCTCCG TATCTCCTCTCGGAA TRQ2_1729 1747855 - 1747424 - | TrkA domain-containing protein TRQ2_1730 1748543 - 1747875 - | rhomboid family protein TRQ2_1731 1749396 - 1748548 - | hypothetical protein TRQ2_1732 1749457 - 1751346 + | methionyl-tRNA synthetase TERM 1833 1752313 - 1752301 - g 72 -6.3 -4.27512 | overlap 1752298 GGTCATAATAAACAA TCTCT ACA AGAGA ACTGCTCTTCAGGAT TERM 1834 1753333 - 1753323 - g 78 -5.4 -4.89966 | ACAGCGAAAAAGAAA CACT CAT AGTG GCAACGAAGATGGGT TRQ2_1733 1751360 - 1753774 + | DNA gyrase, A subunit TRQ2_1734 1753771 - 1754145 + | hypothetical protein TRQ2_1735 1754142 - 1754735 + | LexA family transcriptional regulator TRQ2_1736 1754747 - 1755088 + | anti-sigma-factor antagonist TERM 1835 1755258 - 1755271 + G 72 -5.3 -4.57353 | TCTGTCGAACGAAGC GGATT TTGG AATCC TTTTGTGTGGTACAG TRQ2_1737 1755085 - 1755516 + | ribose 5-phosphate isomerase B TERM 1836 1755639 - 1755663 + GF 91 -8.6 -5.03145 | TGTTGAAGATCTACC TTAGGGAGGG TGAAC CCCTTCCTGA TTTTTTGAAAGATTG TRQ2_1738 1755506 - 1756300 + | ribosomal L11 methyltransferase TRQ2_1739 1756270 - 1756782 + | hypothetical protein TRQ2_1740 1756779 - 1757621 + | pantoate--beta-alanine ligase TRQ2_1741 1757626 - 1758099 + | phosphodiesterase TRQ2_1742 1758129 - 1759040 + | ExsB family protein TRQ2_1743 1762072 - 1759112 - | glycoside hydrolase family protein TERM 1837 1761457 - 1761428 - G 78 -6.4 -4.56597 | opp_overlap 1761426 1761422 CTTTCGCCTCAAAAA CTCCTCTGGAAA TCGTTC TGTCCAGGGGAG TGTGGGTTCTTTAGG TRQ2_1744 1763493 - 1762069 - | carbohydrate kinase FGGY TERM 1838 1762556 - 1762540 - G 71 -7.9 -3.92075 | overlap 1762541 1762550 ATCGGGATCGAGAAA CGCCTGG AAA CCAGGGG CATTCCTGGCCGATT TRQ2_1745 1764200 - 1763490 - | rhamnulose-1-phosphate aldolase TERM 1839 1764950 - 1764934 - H 89 -2.9 -5.65177 | overlap 1764935 1764944 AGAGGCAGAAAAAAA GGTCAGA ACA TCCGACA GATTCGTCGAAGAGG TERM 1840 1766141 - 1766169 + H 88 -11 -4.2528 | opp_overlap 1766138, overlap 1766138 1766142 CACATCTAGAACTTC TGGGGAGAATCC TCTGC GGAATCTCCCCG TTTCTTGAATTGAAC TERM 1841 1766142 - 1766168 + H 86 -12.3 -3.14686 | opp_overlap 1766138, overlap 1766138 1766141 ACATCTAGAACTTCT GGGGAGAATCC TCTGC GGAATCTCCCC GTTTCTTGAATTGAA TRQ2_1748 1767230 - 1768564 + | major facilitator transporter TRQ2_1749 1768613 - 1768876 + | stage V sporulation protein S TERM 1842 1768873 - 1768900 + T 89 -8.4 -4.7339 | opp_overlap 1768872 1768873 1768874, overlap 1768878 AGTCTTTCCAAAAAG CTGAAGGGGAGC ATCA GCTCCCCTTTGA TTTTTCCCATTTCTT TERM 1843 1768878 - 1768895 + T 100 -12.7 -4.32649 | opp_overlap 1768872 1768873 1768874, overlap 1768873 TTCCAAAAAGCTGAA GGGGAGC ATCA GCTCCCC TTTGATTTTTCCCAT TRQ2_1750 1770517 - 1768919 - | ferredoxin-dependent glutamate synthase TERM 1844 1769166 - 1769184 + g 71 -7.5 -3.84712 | overlap 1769179 AATCGGGATCTCAGT TCTTCGT AGGTG ACGAAGA TTTCCTCTACGGTTG TRQ2_1751 1770637 - 1771635 + | TrkA domain-containing protein TRQ2_1752 1771637 - 1771942 + | CutA1 divalent ion tolerance protein TRQ2_1753 1772438 - 1771923 - | hypothetical protein TRQ2_1754 1773148 - 1772435 - | ABC transporter related TERM 1845 1773054 - 1773013 - G 100 -15.3 -4.12902 | gap 1, opp_overlap 1773015 GAATCATGTTGAAAA TAGT-GGTCTTCCCGGCTCC GTT GGGACCGAGAAGACCGACTA TCTCACCCCTGTGAA TERM 1846 1773015 - 1773052 + g 74 -11.3 -2.88249 | gap 1, opp_overlap 1773013 ATCATGTTGAAAATA GT-GGTCTTCCCGGCTCC GTT GGGACCGAGAAGACCGAC TATCTCACCCCTGTG TRQ2_1755 1773624 - 1773145 - | outer membrane chaperone Skp (OmpH) TRQ2_1756 1774184 - 1773639 - | helix-hairpin-helix repeat-containing competence protein ComEA TERM 1847 1774046 - 1774090 + g 74 -5.7 -4.64383 | CGGTGTTCAGCTCCA CAGGAAAGGCGACAACCTTCT GAG AGGATGTTGTGTCCTCTTCTG TTTTCGTTTCTCGTT TRQ2_1757 1774882 - 1774181 - | hypothetical protein TRQ2_1758 1775881 - 1774886 - | peptidase M42 family protein TRQ2_1759 1776897 - 1775878 - | cellulase TERM 1848 1776183 - 1776163 - G 88 -7.5 -5.00616 | TCCCCTGTGAAAAAA GGTGATGGC AGG ACCGTCACC CAGATGTGTTGCCCA TRQ2_1760 1777899 - 1776901 - | peptidase M42 family protein TRQ2_1761 1778534 - 1777902 - | septum site-determining protein MinC TERM 1849 1779228 - 1779215 - g 83 -2.3 -5.69473 | opp_overlap 1779215 GATATCAGAAAAAAA CCACC GGTG GGTTG CTATTTCTACGACCC TRQ2_1762 1778594 - 1779451 + | hypothetical protein TRQ2_1763 1780699 - 1779434 - | citrate transporter TERM 1850 1780081 - 1780093 + g 73 -4.1 -4.7497 | overlap 1780064 TGAGAAGATTTCTAA GCTTT TCA AAGGC TTTTTCATCGATGCG TERM 1851 1780775 - 1780765 - H 74 -3.2 -5.1101 | TTATTATTCAAAAAA GTGA ATT CCAC GGCAAGAATGGTAGA TERM 1852 1780878 - 1780898 + H 70 -9.6 -2.96216 | overlap 1780875 CCATCATTGCTACGG CCCGGCGG TTTCT CCACCGGG TGTGTGATGGTGGGA TERM 1853 1780923 - 1780945 + H 100 -14.9 -5.38054 | GTGGGAGATCGCACG GGCCACGTC GAGAA GACGTGGCC TTTTTGTTTATCGAA TRQ2_1764 1781133 - 1782341 + | IS605 family transposase OrfB TERM 1854 1782351 - 1782372 + F 79 -11.7 -2.75064 | opp_overlap 1782354, overlap 1782348 GGTTGAAGCGGGAAG CCATGACTT CTAT AAGTCATGG TAGTTCACTGGGGAG TRQ2_1765 1782397 - 1783215 + | histidyl-tRNA synthetase-related protein TRQ2_1766 1783209 - 1783835 + | ATP phosphoribosyltransferase TRQ2_1767 1783807 - 1785093 + | histidinol dehydrogenase TRQ2_1768 1785090 - 1786097 + | histidinol-phosphate aminotransferase TRQ2_1769 1786094 - 1786681 + | imidazoleglycerol-phosphate dehydratase TERM 1855 1786908 - 1786894 - g 74 -5.6 -4.63932 | overlap 1786896 GAGTTCGTAAGAAAA CACGTC GAA GACGAG AGGTACGTGGTCGGA TRQ2_1770 1786678 - 1787283 + | imidazole glycerol phosphate synthase, glutamine amidotransferase subunit TRQ2_1771 1787262 - 1787987 + | phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase TERM 1856 1788489 - 1788464 - g 70 -9.7 -3.0682 | overlap 1788461 1788466 1788477 TTGAAGTAGAAAGGA GAGGAGCAGGA GAGA TCCTGCTCACC AGCATCGACAGAGAC TERM 1857 1788720 - 1788706 - g 72 -2.8 -5.06451 | GAGTACCTCAAAAAA CACG GAGTGAA CGTG AGACTGGAGGGGTTG TRQ2_1772 1787977 - 1788738 + | imidazoleglycerol phosphate synthase, cyclase subunit TERM 1858 1789171 - 1789153 - g 74 -3.8 -5.01042 | AAGGCAAAGGAAAAA TCGCCAAA AAA TTCGGGGA AGAAGCGGTAGAGGT TRQ2_1773 1788738 - 1789328 + | phosphoribosyl-ATP diphosphatase TRQ2_1774 1790465 - 1789329 - | UDP-N-acetylglucosamine 2-epimerase TERM 1859 1790888 - 1790878 - g 72 -3.2 -5.08011 | AAAACGGTGAAAAAA GCAC TCG ATGC CCTGGAGAAGTACGA TRQ2_1775 1790509 - 1791516 + | mannose-1-phosphate guanylyltransferase (GDP) TRQ2_1776 1792600 - 1791491 - | major facilitator transporter TERM 1860 1792038 - 1792059 + g 83 -2.3 -5.64873 | overlap 1792035 AGCCAGAAGAAAGTG GGAAGAG GTTTCTTA CTCTTTC TTTTTTCTTCTTCAC TRQ2_1777 1792745 - 1792987 + | YruB family glutaredoxin-like protein TERM 1861 1792991 - 1793007 + T 100 -15.1 -4.72617 | opp_overlap 1792991 GGAATATCGTAAAAA GCGGGGG AAT CCCCCGC TTTATTATTTTGTCA TERM 1862 1793007 - 1792991 - T 100 -15.1 -4.66953 | opp_overlap 1792991 GGAATATCGTAAAAA GCGGGGG AAT CCCCCGC TTTATTATTTTGTCA TRQ2_1778 1793611 - 1793012 - | TetR family transcriptional regulator TRQ2_1779 1794416 - 1793625 - | ABC transporter, permease protein, putative TERM 1863 1793717 - 1793704 - G 76 -8.1 -4.06281 | AGCGCAAAGAAAAGA CCGGA GAAT TCCGG AAAACCGTGTCTTAT TRQ2_1780 1795294 - 1794413 - | ABC transporter related TRQ2_1781 1796024 - 1795377 - | hypothetical protein TRQ2_1782 1797111 - 1796140 - | hypothetical protein TRQ2_1783 1797638 - 1797108 - | integral membrane protein-like protein TRQ2_1784 1797736 - 1798497 + | esterase TERM 1864 1798996 - 1799007 + G 72 -5.8 -4.54477 | opp_overlap 1798994 1798996 TTTCTGTTCCAAACA TCGC CCTT GCGA TTTTATCCATTTTCG TRQ2_1785 1798500 - 1799768 + | major facilitator transporter TERM 1865 1800279 - 1800267 - g 79 -4.1 -5.11937 | opp_overlap 1800272, overlap 1800278 AAGAACTGGAAAAAA TCCTC GAG GAAGA TCCGCTCGCTTTCAA TRQ2_1786 1799846 - 1802989 + | hypothetical protein TERM 1866 1803891 - 1803870 - g 73 -4.4 -4.87318 | TGGAAAATTGAAAAA GACCTTCG ACCTCA CAAAGGCC ATCATGGAAAAGTAC TRQ2_1787 1802986 - 1804080 + | hypothetical protein TERM 1867 1804137 - 1804109 - f 73 -6.1 -4.34402 | TTTCTTATAGTAAAA TTTCAACTGTGAT GCC ATCACAGACAAAA ACGCTGGAGGTATAA TRQ2_1788 1804154 - 1805035 + | hypothetical protein TRQ2_1789 1805434 - 1805015 - | hypothetical protein TERM 1868 1805807 - 1805789 - g 72 -8.9 -3.65529 | AGAGGTCCAGCCAAA GGTGGTA TCAGG TACCACC CCGATGTCACACTCG TERM 1869 1806222 - 1806212 - g 72 -5.4 -4.48902 | ATAGATCCAAAGAAA GCAA CAG TTGC CGTTCAGGGATTTGG TRQ2_1790 1805582 - 1806832 + | Glu/Leu/Phe/Val dehydrogenase TERM 1870 1806858 - 1806838 - T 100 -14 -5.02074 | opp_overlap 1806838 CTATCCCTGAAAAAA GCCCCACC TTCCC GGTGGGGC TTTGTATTCATCGAA TERM 1871 1806838 - 1806858 + T 100 -14 -4.23674 | opp_overlap 1806838 CTATCCCTGAAAAAA GCCCCACC TTCCC GGTGGGGC TTTGTATTCATCGAA TRQ2_1791 1808641 - 1806866 - | hypothetical protein TERM 1872 1807398 - 1807384 - G 71 -7.1 -4.03234 | CGGCTTCGACAGAAA GCCTC GCGTA GAGGC GACCAGAAGAAGTGG TERM 1873 1807729 - 1807745 + g 72 -6.6 -4.30809 | TCTGCTTTGGTTCTG GGAAGA CATCA TCTTCC TTTTCATGCCTCTTC TERM 1874 1807819 - 1807838 + g 77 -3.5 -5.09685 | AGATCTGGAAAGCGG GGGTCAT GAGGTA AGGACCC TTTTTGTATATCTTC TRQ2_1792 1811206 - 1808696 - | hypothetical protein TERM 1875 1809947 - 1809919 - G 82 -11.1 -3.56325 | opp_overlap 1809913 1809910 TTTTCAGAACGATAA TGTCGTTCTTCTC TGT GAGAAGAGCAACA AAACGACCTGATACG TRQ2_1793 1811687 - 1811211 - | hypothetical protein TRQ2_1794 1811827 - 1812924 + | ATPase TRQ2_1795 1813346 - 1812939 - | cupin 2 domain-containing protein TRQ2_1796 1814247 - 1813387 - | 2,5-didehydrogluconate reductase TRQ2_1797 1815470 - 1814259 - | major facilitator transporter TRQ2_1798 1816483 - 1815482 - | aldo/keto reductase TERM 1876 1816282 - 1816292 + g 71 -6.8 -4.03234 | overlap 1816274 CGAGTGCTTCGCCTA CGAG TTC CTCG TTTGTGTAAGGGCCG TRQ2_1799 1816612 - 1817511 + | AraC family transcriptional regulator TERM 1877 1817642 - 1817607 - g 100 -8.5 -5.20783 | opp_overlap 1817613 1817638, overlap 1817637 ATGGAAAGAGAAAAA GTGGAGCTTTTTAAA GAAGTG TTGAAAAAACTCCAC GAAGGTGAAGACGTG TERM 1878 1817652 - 1817637 - g 80 -5.4 -5.03145 | opp_overlap 1817638, overlap 1817607 GAAGTGTTGAAAAAA CTCCAC GAAG GTGAAG ACGTGGAATCTTTGA TRQ2_1800 1817592 - 1818893 + | putative PAS/PAC sensor protein TERM 1879 1818891 - 1818923 + F 76 -10.8 -2.98784 | gap 1, opp_overlap 1818891 1818890 1818898, overlap 1818898 CTCGACTGGAAAGAC TGAAAAA-GCGCAGG AGAA CCTGTGCTTTTTTCA ATTATTCGTTTTGTA TERM 1880 1818915 - 1818898 - f 80 -6.9 -4.77986 | opp_overlap 1818891 1818898, overlap 1818891 1818890 GGAAAGACTGAAAAA GCGCAGG AGAA CCTGTGC TTTTTTCAATTATTC TERM 1881 1818898 - 1818915 + F 100 -9.1 -5.2166 | opp_overlap 1818898 1818891 1818890, overlap 1818891 GGAAAGACTGAAAAA GCGCAGG AGAA CCTGTGC TTTTTTCAATTATTC TRQ2_1801 1819033 - 1819359 + | ArsR family transcriptional regulator TRQ2_1802 1819365 - 1820453 + | permease TRQ2_1803 1820467 - 1820709 + | redox-active disulfide protein 2 TERM 1882 1820729 - 1820754 + F 100 -14.1 -4.08974 | opp_overlap 1820733, overlap 1820733 GAACTCTGTTTAAGA TAAAGCCGCCT TCTC AGGCGGCTTTG TTTGTATCATCCCCT TERM 1883 1820750 - 1820733 - f 100 -12.7 -4.1891 | opp_overlap 1820733 1820729 TCTGTTTAAGATAAA GCCGCCT TCTC AGGCGGC TTTGTTTGTATCATC TERM 1884 1820733 - 1820750 + F 100 -12.7 -4.64048 | opp_overlap 1820733, overlap 1820729 TCTGTTTAAGATAAA GCCGCCT TCTC AGGCGGC TTTGTTTGTATCATC TERM 1885 1820771 - 1820782 + F 80 -4.4 -5.2112 | overlap 1820776 TTGTATCATCCCCTC CTCT TTGA AGAG TTTTTTCATGCTCTT TRQ2_1804 1821347 - 1823101 + | hypothetical protein TRQ2_1805 1826167 - 1823126 - | helicase domain-containing protein TERM 1886 1823156 - 1823178 + g 73 -2 -5.20333 | TATTTTCTGTCCGAG TGAAATGACG TAT CGTTGTTTTG TTTTTATTGTCGATC TERM 1887 1825237 - 1825263 + g 80 -6.5 -4.83615 | opp_overlap 1825239, overlap 1825239 TGTTTATAGTTTTCA AAGCGGATTCG TAACT CGAAGCCGCTC TTTTTCTCAAAAGTA TERM 1888 1825261 - 1825239 - G 72 -9.1 -3.56643 | opp_overlap 1825237 1825239 TTTATAGTTTTCAAA GCGGATTCG TAACT CGAAGCCGC TCTTTTTCTCAAAAG TERM 1889 1825239 - 1825261 + g 79 -9.1 -4.03995 | opp_overlap 1825239, overlap 1825237 TTTATAGTTTTCAAA GCGGATTCG TAACT CGAAGCCGC TCTTTTTCTCAAAAG TRQ2_1806 1826660 - 1826151 - | hypothetical protein TRQ2_1807 1830025 - 1826657 - | hypothetical protein TERM 1890 1828558 - 1828573 + g 76 -4.6 -5.00884 | opp_overlap 1828560 CGGTGTCTTTTATAT CAGCGG GAAT CCACTG TTTTTTGGAGAAAGT TERM 1891 1829134 - 1829147 + g 74 -8.1 -3.86194 | overlap 1829146 TCTTTTTCAAGACCT CGACG AGTT CGTCG TTTATGCCAACGGTT TRQ2_1808 1833051 - 1830025 - | hypothetical protein TRQ2_1809 1834040 - 1833102 - | hypothetical protein TERM 1892 1833875 - 1833888 + gr 78 -6.7 -4.57569 | TCAGAACACCGTTTT CTTCG AGCA CGAAG TTTTTAGAACACTCC TRQ2_1810 1834443 - 1834000 - | hypothetical protein TERM 1893 1834221 - 1834231 + gr 82 -3.2 -5.45652 | overlap 1834218 CATGGAGGATCGTCT CTTC GAG GGAG TTTTTTCTTCGAAGT TRQ2_1811 1839034 - 1834430 - | alpha-2-macroglobulin domain-containing protein TERM 1894 1835700 - 1835683 - G 72 -8.5 -3.83568 | opp_overlap 1835693 GGAGAGCCAGAATAA CAAAGGA CGTG TCCTTTG TGGAAGTCCAGAAAG TERM 1895 1837159 - 1837147 - G 76 -7.7 -4.36411 | CATCAACGAGGAAAA GACAG ACT CTGTC CACATTCGATTCGAT TERM 1896 1839190 - 1839204 + H 79 -2.8 -5.40072 | opp_overlap 1839199 AGAATGTTATCATTT TCACAA GGA TTGAGA TTTTTTTCACAAAAA TERM 1897 1839419 - 1839408 - g 70 -2.2 -5.07107 | GAAACTGTCAAAAAA CTCG GCCA CGAA GTTCTGGAAATCGAA TRQ2_1812 1839240 - 1839479 + | SirA family protein TRQ2_1814 1840511 - 1840867 + | DsrE family protein TRQ2_1815 1840877 - 1841230 + | uncharacterized protein involved in the oxidation of intracellular sulfur-like protein TRQ2_1816 1841242 - 1841505 + | DsrH family protein TERM 1898 1841547 - 1841565 + F 100 -13.1 -4.08216 | opp_overlap 1841546 1841541 CTAAGTCAACAGCAG GCCGCGG CTCGT CCGCGGC TTTTGCAGAAGGTGG TERM 1899 1841994 - 1841980 - g 72 -6.4 -4.35644 | overlap 1841989 ACGACCAGAAAAGAA CTGGAA AAA CTCCAG CCTGGAGAAACCCTG TERM 1900 1842001 - 1841989 - g 82 -7.7 -4.7153 | overlap 1841980 AAAGAACTGGAAAAA CTCCA GCC TGGAG AAACCCTGATCGTGA TRQ2_1817 1841587 - 1842141 + | ArsR family transcriptional regulator TERM 1901 1843742 - 1843727 - T 72 -5.4 -4.54047 | GCATTCGACACAAAA GACCTC AAAA AAGGTC TGAACGTTATAAAAG TRQ2_1820 1846100 - 1844769 - | diguanylate cyclase TERM 1902 1844823 - 1844841 + g 100 -12.4 -5.86061 | opp_overlap 1844822 1844820 1844823 GAAAAAACACAATAC GGGGAGCC TCT GGCTCCTC TTTTTTTTAATCACA TERM 1903 1844841 - 1844823 - G 72 -10.2 -2.78794 | opp_overlap 1844823, overlap 1844822 1844820 GAAAAAACACAATAC GGGGAGCC TCT GGCTCCTC TTTTTTTTAATCACA TERM 1904 1846246 - 1846210 - H 73 -9 -3.54129 | gap 1, opp_overlap 1846208 1846211, overlap 1846211 TAGATGTTTCTCAAA TCGCGGTGTCGTAAAAT TGAC ATTTTACGACACCA-AA GTCTTCCTCCCAAAA TERM 1905 1846246 - 1846211 - H 74 -10.6 -2.72263 | opp_overlap 1846211 1846208, overlap 1846210 AGATGTTTCTCAAAT CGCGGTGTCGTAAAAT TGAC ATTTTACGACACCAAA GTCTTCCTCCCAAAA TERM 1906 1846293 - 1846265 - H 72 -7.7 -3.90048 | opp_overlap 1846269 1846271, overlap 1846269 1846279 TTCCTCCCAAAAATA TAAATCTGAATTT ACT AAATTCACATTTA GCAAATCATCATTTA TERM 1907 1846627 - 1846615 - g 72 -2.7 -5.00616 | TTCCCTTCTAAAAAA TGTCT TTG AAACA CGAGAGGGTTTAAAA TRQ2_1821 1846346 - 1847698 + | ATPase TRQ2_1822 1848227 - 1847679 - | GCN5-related N-acetyltransferase TERM 1908 1848228 - 1848243 + H 84 -4.7 -5.42514 | opp_overlap 1848228 CTTTCCTTCAAACAT CGAAC CCCTCC GTTCG TTTTTTGATTTATAG TRQ2_1823 1848291 - 1849052 + | integrase family protein TERM 1909 1849146 - 1849156 + T 70 -2.6 -4.91084 | opp_overlap 1849146 CTCTTTGTTATCTAA TTTA CCC TAAA TTTTATTGTTCAATA TRQ2_1824 1850037 - 1849231 - | PP-loop domain-containing protein TRQ2_1825 1850785 - 1850003 - | 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase TERM 1910 1850248 - 1850232 - GR 70 -9.5 -2.84173 | opp_overlap 1850235, overlap 1850235 AGAGAAGCTATGAGA GAAGGAA GAA TTCCTTC CATTCCGGCAAAGAC TERM 1911 1850439 - 1850459 + gr 71 -3.3 -4.74013 | overlap 1850441 ACTCCGACTTTTCCG TTCAACTTT TCC AGAGTTGTA TTTTCTCTCTTTAAA TRQ2_1826 1851986 - 1850778 - | hypothetical protein TERM 1912 1851004 - 1851019 + g 75 -6.1 -4.41348 | GGATAGAAAACCCTC GCACC TATGCT GGTGC TTTCTTTGAAGAGGA TERM 1913 1852393 - 1852381 - g 74 -3.4 -4.94487 | overlap 1852392 GGATAAAAGAGAAAA TCGT AGAAA ACGA ACACTTTGCTCCGCG TRQ2_1827 1852131 - 1853777 + | M3 family oligoendopeptidase TERM 1914 1853847 - 1853877 + F 100 -16.3 -5.18371 | overlap 1853841 1853832 CCTGAAGAGGGCTGA TGGCCTCTACTGG CTTGA TCAGTAGAGGCCA TTTTCTTTTGTGGGA TERM 1915 1854976 - 1854990 + G 73 -4.2 -4.85782 | GGGACTTCCCATTCC CGCG AGACGAG CGCG TTTGTTTTTACCCGA TRQ2_1828 1853903 - 1855420 + | DNA mismatch repair protein MutS domain-containing protein TERM 1916 1855775 - 1855765 - g 72 -5.4 -4.37658 | AACGGCTCCAGAAAA GCTT TAG AAGC CATGCTGGTAGCGCT TRQ2_1829 1855417 - 1856922 + | DNA mismatch repair protein MutS domain-containing protein TRQ2_1830 1857624 - 1856908 - | hypothetical protein TRQ2_1831 1858187 - 1857624 - | LemA family protein TRQ2_1832 1858926 - 1858219 - | radical SAM domain-containing protein TERM 1917 1858297 - 1858323 + g 80 -5.8 -4.91473 | overlap 1858313 GGCTTCCAGATACTC CTTCTCTATCCT GCA AGGAACGGGAAG TTTCTTTTTGAGTTC TERM 1918 1858545 - 1858527 - G 87 -9.6 -4.22346 | overlap 1858520 CAAAGTCAGTGAAAA GATCCACC AGT GATGGATC GTAGCCAAACAAAAT TERM 1919 1859602 - 1859570 - g 71 -6.9 -4.10161 | GACGATCCCCGAAAA CCCACCGAACGATCG CTA CGGTCTTCCGATGAG CATAAAAATCCCAAA TRQ2_1833 1858947 - 1859705 + | hypothetical protein TERM 1920 1860889 - 1860916 + G 72 -9.2 -3.64755 | opp_overlap 1860886 1860889 1860893 1860895 CAGCCTGAAAAACAT CAAAGAGATCGT AGAA ACGGTCTCTTCG TTCTTCAAACTCTAT TERM 1921 1861106 - 1861125 + G 76 -4.9 -4.83615 | overlap 1861124 TCATTGATCGGAGTA CCTCCCG AGAAAC CGGAAGG TTTTTATCAAGCCTA TRQ2_1834 1859939 - 1861210 + | PhoPQ-activated pathogenicity-related protein-like protein TRQ2_1835 1861224 - 1862051 + | hypothetical protein TRQ2_1836 1863073 - 1862048 - | hypothetical protein TERM 1922 1862940 - 1862913 - GT 100 -18.6 -3.90744 | opp_overlap 1862913 1862917 TCTCTTTTTAAAGAA TCAACGAGGGTG ATGA CACCCTCGTTGA TCGTTCCTCTCATGG TERM 1923 1862913 - 1862940 + gT 100 -18.6 -2.82519 | opp_overlap 1862913, overlap 1862917 TCTCTTTTTAAAGAA TCAACGAGGGTG ATGA CACCCTCGTTGA TCGTTCCTCTCATGG TERM 1924 1862917 - 1862936 + gT 100 -13.6 -3.2981 | opp_overlap 1862913, overlap 1862913 TTTTTAAAGAATCAA CGAGGGTG ATGA CACCCTCG TTGATCGTTCCTCTC TRQ2_1837 1864332 - 1863013 - | glutamine synthetase, type I TERM 1925 1864437 - 1864461 + r 74 -5.8 -4.68601 | gap 1, overlap 1864439 GAAAAAGCAACATCC CAT-TCTGTCC CCGG GGACAGAGGTG TTTGTTATTTTGCAT TRQ2_1838 1865788 - 1864517 - | hypothetical protein TERM 1926 1864970 - 1864954 - GR 77 -7.3 -4.39954 | GAAGAACAAGAGAAA GTTTCAC ACC GCGAAAC TCCAGTATTCCGTTG TRQ2_1839 1866992 - 1865760 - | hypothetical protein TRQ2_1840 1867882 - 1866968 - | RluA family pseudouridine synthase TERM 1927 1867364 - 1867378 + g 80 -6.4 -4.7889 | GGGTACTCCCTTTAC GAGTGC GAT GTACTC TTTTTCCATGTTTCT TRQ2_1841 1868232 - 1867888 - | aspartate 1-decarboxylase TRQ2_1842 1868336 - 1869070 + | methyltransferase type 11 TRQ2_1843 1869067 - 1869420 + | PadR-like family transcriptional regulator TRQ2_1844 1870628 - 1869411 - | amidohydrolase TRQ2_1845 1871062 - 1870625 - | signal-transduction protein TRQ2_1846 1872349 - 1871072 - | citrate transporter TERM 1928 1871847 - 1871835 - G 71 -3.4 -4.77567 | opp_overlap 1871835 ACGTTGAGAACAAAA TCCA GGAAG TGGA GTTTTGCCGCCGAAG TERM 1929 1872368 - 1872352 - H 73 -5.1 -4.63218 | overlap 1872354 1872355 CGTCTTCGAACAAAA TATCTCC TCC GGAGGTA AGAGATCGATGAAGA TRQ2_1847 1872377 - 1873546 + | hypothetical protein TRQ2_1848 1873985 - 1873527 - | restriction endonuclease TRQ2_1849 1874364 - 1873951 - | hypothetical protein TRQ2_1850 1874426 - 1875481 + | ATPase TRQ2_1851 1875478 - 1876671 + | uncharacterized protein-like protein TRQ2_1852 1876668 - 1877408 + | hypothetical protein TRQ2_1853 1877447 - 1877629 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein