TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.473246 %AT, 1027205 nt, 10348 terms. Intergenic: 0.462611 %AT, H2T: 151384 nt, 745 terms; T2T: 38973 nt, 413 terms; H2H: 57404 nt, 407 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|15638995|ref|NC_000919.1| Treponema pallidum subsp. pallidum str. Nichols, complete genome (length 1138011) TERM 1 327 - 315 - g 71 -3.4 -4.84359 | opp_overlap 315 CTACCTGGAGAAAAA CTCT CCTGC AGAG GTTCCTTCCAAAAAG TERM 2 652 - 639 - g 75 -5.2 -4.69028 | opp_overlap 643 TTTTAAAAAAAAATA CCGC TACACC GCGG ATGTACTTCTTATAG TP0001 4 - 1398 + | chromosomal replication initiator protein (dnaA) TERM 3 1971 - 1984 + GF 75 -6.7 -4.323 | opp_overlap 1969 1970 TTTCAGCTCAGAACC CTCTC GCAT GAGAG TTTTCCATGTTTCCC TERM 4 2204 - 2189 - gf 100 -9 -5.76633 | opp_overlap 2202 CTATATAGAAAAAAA GGGAGA ATCC TCTCCC CAATCCTTTTCGGGT TP0002 1641 - 2756 + | DNA polymerase III, subunit beta (dnaN) TERM 5 2825 - 2836 + GF 100 -5.8 -5.93809 | opp_overlap 2824 ACACGATTGATATAT CCTC TCCT GAGG TTTTTTTTGTGGGAA TP0003 2623 - 3834 + | recF protein (recF) TP0004 3827 - 4264 + | hypothetical protein TERM 6 4675 - 4686 + G 71 -3 -4.77896 | overlap 4679 TGACGCGCTAGTGCG TCTT GGGC AAGA TTTTTCCCTTCGTTA TERM 7 4822 - 4834 + G 70 -6.3 -4.19974 | opp_overlap 4822 AGAGGACATAAAAAA GGAAA CGG TTTCC TTTGTTCCCAATTTT TERM 8 4834 - 4822 - g 95 -6.3 -5.40625 | opp_overlap 4822 AGAGGACATAAAAAA GGAAA CGG TTTCC TTTGTTCCCAATTTT TERM 9 4883 - 4893 + G 80 -5.4 -4.89477 | overlap 4877 4876 CCCACGGTTCTTCCT GGAA GGT TTCC TTTTCTTCTTGCGAA TP0005 4391 - 6832 + | DNA gyrase, subunit A (gyrA) TP0006 7014 - 7181 + | Tp75 protein TP0007 7317 - 7967 + | hypothetical protein TP0008 7991 - 8260 + | hypothetical protein TERM 10 9686 - 9725 + F 91 -7.8 -5.01422 | opp_overlap 9688 9700, overlap 9687 9688 9711 TTTCCAATAGTGAGA TATGCGCCGTAGAAGCGA AGGG TCGCTTCTACGGAGAAGC TTTGTTTTTCTGTGG TERM 11 9687 - 9724 + F 77 -11.3 -3.59226 | opp_overlap 9688 9700, overlap 9686 9688 9711 TTCCAATAGTGAGAT ATGCGCCGTAGAAGCGA AGGG TCGCTTCTACGGAGAAG CTTTGTTTTTCTGTG TERM 12 9688 - 9723 + F 83 -14.8 -2.73909 | opp_overlap 9688 9700, overlap 9687 9686 9711 TCCAATAGTGAGATA TGCGCCGTAGAAGCGA AGGG TCGCTTCTACGGAGAA GCTTTGTTTTTCTGT TERM 13 9723 - 9688 - f 86 -14.8 -2.9518 | opp_overlap 9688 9687 9686 9711, overlap 9700 TCCAATAGTGAGATA TGCGCCGTAGAAGCGA AGGG TCGCTTCTACGGAGAA GCTTTGTTTTTCTGT TERM 14 10137 - 10110 - f 86 -7 -5.09245 | GTAAAAGTATAAAAA TGCACGAGCCTA ACAC TAGACGCATGCA TACAGTAGTGTACCG TP0010 10237 - 10362 + | hypothetical protein TERM 15 10352 - 10337 - f 89 -3.2 -5.49729 | AAGTAGTGAAAAAAA TTACCG CTGA CGGGAA AAAATGTTGATCGTG TERM 16 11093 - 11054 - g 82 -9.4 -4.23758 | gap 1, overlap 11089 ACGGTATATGGAAAA GTGCTCCTTC-TGTCACCT CTA AGGTGAAAGGAAAGGGCAC CAATAGTCGGCGCAT TP0011 10396 - 12378 + | TPR protein B (tprB) TP0012 12372 - 12548 + | hypothetical protein TERM 17 13062 - 13079 + GF 71 -3.3 -4.73614 | CAAAGAAAATGGGCG CGCGTAC GTTG GTGCACG TTTCTTTTCCTCGTC TP0013 12545 - 13210 + | hypothetical protein TERM 18 13268 - 13280 + GF 70 -6.3 -4.15833 | CGGTAAGTATGGGAA GAACA CTA TGTTC TTTTGCACTAATGAT TP0014 13167 - 13775 + | hypothetical protein TERM 19 14918 - 14940 + GF 90 -6.9 -5.07652 | overlap 14908 GTTTTGACACCCCAT GGGGGAGGT CTGTT ACTACCCCC TTTTATTTTCAAGAA pheT 13966 - 15780 + | phenylalanyl-tRNA synthetase subunit beta TERM 20 16581 - 16571 - gf 78 -2.4 -5.14563 | opp_overlap 16571 GCCTGTATTAAAAAA CGCG TGG CGTG TTATGCACCGGTTTT TERM 21 16703 - 16692 - gf 70 -5.8 -4.21319 | opp_overlap 16671 16666 ATGAATTTGAAGAAA TGCG TGCG CGCA TCATATCGTACATAG TERM 22 17513 - 17532 + GF 74 -7.8 -4.08945 | overlap 17514 CGCAGGCAGTACGTG TGTTCCCG CGCG CGGGAGCG TTTTCAGCGCATGAT TP0016 15743 - 18316 + | ATP-dependent protease LA (lon-1) TP0017 18404 - 19351 + | hypothetical protein TERM 23 20014 - 20004 - g 73 -4 -4.81212 | GTGAGCAGAAGAAAA TTTC AGA GAAA CTGGGAGAAGGGCGC TERM 24 20650 - 20679 + G 71 -2.9 -4.85599 | gap 1, opp_overlap 20649 20650, overlap 20652 TTTGAAAGAAAGTAC TGGAT-TTGCTGCG AAT CCCAGCAATATCGA TTTTTATACGGTGCG TP0018 19418 - 21391 + | transcription elongation factor TP0019 21558 - 22046 + | transcription elongation factor (greA) TERM 25 22418 - 22437 + G 73 -9.3 -3.64703 | opp_overlap 22406 ACAGCGCTAGATTTC GCGCGTA CACACT TACGCGC TTTGCCTGCAGCACA TERM 26 23215 - 23226 + G 100 -4.4 -5.4833 | overlap 23214 CGGTGCACGCGCGAT GTTG CGAA CAAC TTTTTTATTACCTAA TP0020 22046 - 24169 + | 76K protein TERM 27 24266 - 24246 - f 73 -6 -4.49756 | overlap 24247 GGGGAAAGATGAAAA CCGGGGCG GATCG CGCACCGA AGCGTCCCCCTACCG TP0021 25107 - 25373 + | hypothetical protein TERM 28 25551 - 25577 + GF 79 -4.4 -4.98255 | opp_overlap 25550 25551 25553, overlap 25553 CTCTGTTGCAAAAAG CATTGAGTACGG TAG CTGGACTCAATC TTTTTCTCATTCCGC TERM 29 25553 - 25575 + GF 70 -7 -4.11322 | opp_overlap 25553 25550 25551, overlap 25551 CTGTTGCAAAAAGCA TTGAGTACGG TAG CTGGACTCAA TCTTTTTCTCATTCC TERM 30 25614 - 25597 - gf 91 -11.3 -4.09685 | TCTCATTCCGCAAAA GCGGATG CGTC CATCCGC ACAGTTATTGACAAC TP0022 25328 - 27496 + | hypothetical protein TP0023 27557 - 28888 + | sodium- and chloride- dependent transporter TP0024 29068 - 29778 + | hypothetical protein TP0025 32928 - 29857 - | hypothetical protein TERM 31 30672 - 30684 + g 72 -4.8 -4.72272 | overlap 30664 CACATCCGATCACTC CTGC AGTGA GCAG TTTTTCATGCAGCGC TERM 32 30970 - 30939 - G 95 -10.2 -4.65933 | overlap 30969 TATCTGTAAAAGAAA GACTGCGCACGTGT GCAC ACACGTACGAAATC GCCTGTACGATAAAG TERM 33 31475 - 31500 + g 71 -2.5 -4.99861 | overlap 31477 31478 GCTGCTGGCTGCGTG AGTGTACGGGA GAAA TCCTGTACGTA TTTTTCTAATTGCTC TERM 34 31477 - 31498 + g 70 -7.3 -4.11322 | overlap 31475 31478 TGCTGGCTGCGTGAG TGTACGGGA GAAA TCCTGTACG TATTTTTCTAATTGC TERM 35 32233 - 32211 - G 77 -10 -3.67737 | opp_overlap 32211 32210 32208 CAGAAAATTTTGAAA GGCATTTATC CTC AATAAATGCC ATCTGTTTTTCGGTG TP0026 33979 - 32957 - | flagellar motor switch protein (fliG-1) TERM 36 33066 - 33086 + g 100 -13.3 -4.58283 | overlap 33067 AACGTGTCGTACTCA TCGCGCACA AGC TGTGCGCGG TTTTTAGAGAGATTA TERM 37 33067 - 33085 + g 100 -14.6 -3.34488 | overlap 33066 ACGTGTCGTACTCAT CGCGCACA AGC TGTGCGCG GTTTTTAGAGAGATT TERM 38 34079 - 34048 - H 81 -12.2 -3.48276 | overlap 34067 34068 GTGCTCTTGACACAA GGGCGTGAGCACCT TAAA AGGTGCCCCCCCCC AGCGGGGAGGGGTCC TERM 39 34094 - 34067 - H 88 -11.2 -4.15565 | gap 1, overlap 34048 34068 GTGAGCACCTTAAAA GGTGCCCCCCCCC AGC GGGGAGGGGT-CC AAGGATGTATGGCGT TERM 40 34094 - 34068 - H 72 -11.4 -3.09018 | overlap 34048 34067 TGAGCACCTTAAAAG GTGCCCCCCCCC AGC GGGGAGGGGTCC AAGGATGTATGGCGT TP0027 34205 - 35428 + | hemolysin, putative TP0028 35442 - 36803 + | hemolysin, putative TP0029 36911 - 38188 + | UDP-N-acetylglucosamine 1-carboxyvinyltransferase groEL 38307 - 39941 + | chaperonin GroEL TERM 41 40234 - 40246 + G 81 -6.9 -4.64076 | GTTTCCTTGTTTCAG GCCTG TCT CGGGC TTTTCTGGTTTACTT TP0031 40005 - 40283 + | hypothetical protein TP0032 41080 - 40280 - | hypothetical protein TERM 42 40310 - 40329 + g 82 -2.1 -5.45802 | ACTTATGGGCGAAGA TCTCTTG CCTGGC CGAGGGA TTTTTCTTTTCCACG TERM 43 40672 - 40695 + g 74 -2.4 -5.1287 | gap 1, overlap 40673 40675 CTCCTGCCTGTTCTA GGC-CACGTAT GAG GTACGTGTGCA TTTTTTCCATGTGAG TP0033 41688 - 41077 - | hypothetical protein TP0034 42739 - 41789 - | ABC transporter, periplasmic binding protein TERM 44 41852 - 41870 + g 82 -11.8 -3.54622 | AATGTTGTGTTTCAT CCTTTCGT AGT ACGAAAGG TTCTCCTCGTTTTTT TERM 45 42717 - 42700 - G 90 -6.9 -5.06414 | CCTGTGCAAGAAAAA CCACCCC CGCA AGGGCGG CAACTACTGAGCAGC TP0035 42937 - 43653 + | ABC transporter, ATP-binding protein TERM 46 43675 - 43690 + G 70 -5.4 -4.35042 | AGTACGCATTTATGC GCAACG CTTT TGTTGC TTCTTTTCTCATAGC TERM 47 43827 - 43838 + G 100 -4.4 -5.81412 | overlap 43818 TGCGGCATCCATCCA GGAT GGGG ATCC TTTTTTTTCACTGCC TP0036 43653 - 44453 + | ABC transporter, permease protein TP0037 45557 - 44562 - | D-specific D-2-hydroxyacid dehydrogenase TERM 48 45275 - 45288 + g 70 -4.5 -4.57341 | gap 1 ACGGTACGTTCGTCA GC-CGG ATG CCGTGC TTTTTCAGCAAAGTT TP0038 46706 - 45654 - | regulatory protein (pfoS/R) TERM 49 46623 - 46602 - G 93 -12.9 -3.61894 | overlap 46580 46603 AAGCGCTCTGAACAA CTCCCCCGC GATA GCGGGGGGG ACAAGACCGATGACG TERM 50 46624 - 46603 - G 73 -11.5 -2.76815 | overlap 46580 46602 AGCGCTCTGAACAAC TCCCCCGCG ATAG CGGGGGGGA CAAGACCGATGACGA TP0039 46755 - 46913 + | hypothetical protein TERM 51 47228 - 47216 - f 76 -10.5 -3.72576 | opp_overlap 47225 TCCCTGTGGACCAAA CCGCG GGG CGCGG TTCAGATACCCGCTA TP0040 47591 - 49384 + | methyl-accepting chemotaxis protein (mcp1) TP0041 49386 - 49508 + | hypothetical protein TERM 52 49622 - 49633 + G 83 -5.8 -5.01732 | GACCAACAGTCTCGT GCTC TTTT GAGC TTTTTTAAACGGGTT TP0042 49505 - 50437 + | hypothetical protein TERM 53 51779 - 51805 + G 72 -4.4 -4.63218 | gap 1, opp_overlap 51779, overlap 51779 AGAGGCTTTGTATAA GG-TGCGGAGT AAGAGA ACACCGCATCC TTTTCTTACCCCCGA TP0043 50418 - 52550 + | soluble lytic transglycosylase, putative TERM 54 52878 - 52852 - g 75 -5.1 -4.63932 | gap 2, overlap 52853 52854 GACTGCTCAACAAAA GCCGGGGCCCTGC AGT GCAGG-CGCCG-C GTATCCAAGCAGATA TERM 55 53279 - 53296 + G 71 -2.6 -5.01811 | opp_overlap 53270, overlap 53270 53280 GGAAAAGCAAGAAGC CGACGC TATCAT GCGTCC TTTTTCCTTTGCTCA TP0044 52590 - 54482 + | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA TERM 56 54492 - 54476 - T 83 -12.3 -3.64703 | GCTCGCCCACTTAAA GCGGTAG CAG CTACCGC AGAGATAGAAGAACC TP0045 55437 - 54538 - | adenosine deaminase TERM 57 54880 - 54891 + g 79 -3.6 -5.0666 | overlap 54877 CGCATCAGAGAACTC GCCT ACGT GGGC TTTCTTTTTTAAGTG TP0046 56500 - 55799 - | hypothetical protein TERM 58 56358 - 56331 - G 72 -5.5 -4.4891 | GGTACCACGACAAAA GTGTGCACGCG TAGCGC CGCGTGAAAAC GCGCATATAACACTT TP0047 57039 - 56518 - | hypothetical protein TERM 59 56628 - 56638 + g 86 -6.8 -4.97405 | AGGAAGCCAGCTTTT GGTC AAT GACC TTTATTTTTGTAAAT TERM 60 56907 - 56871 - G 77 -10.2 -3.61398 | gap 1, opp_overlap 56875, overlap 56873 GTTCTTCGTGAACAA GAGACGGATCCTGCACT GCAG AGTGCGGG-TCCGTCTT AGGATATAGGAGGGA TERM 61 56905 - 56873 - G 83 -12.8 -3.38812 | gap 1, opp_overlap 56875, overlap 56871 TCTTCGTGAACAAGA GACGGATCCTGCACT GCAG AGTGCGGG-TCCGTC TTAGGATATAGGAGG TERM 62 56875 - 56903 + g 75 -11.8 -3.07962 | gap 1, opp_overlap 56873 56871 TTCGTGAACAAGAGA CGGATCCTGCACT GCAG AGTGCGGG-TCCG TCTTAGGATATAGGA TERM 63 56934 - 56949 + g 88 -2.4 -5.49568 | overlap 56936 GGGAGAGAAAGCGCG CAGCCT GCAG GGGCCG TTTTTCTTTTGACTT TP0048 57476 - 57045 - | hypothetical protein TP0049 58526 - 57498 - | hypothetical protein TERM 64 58255 - 58279 + g 74 -9.9 -3.49951 | TCTGCTGCTTCTTGG CGCAGGAGTGC AAG GTGCACCTGCG TTCTGTCCACCTCTG TERM 65 58622 - 58612 - R 70 -6.8 -4.07568 | CCTCTCCGGGGAAAA CGGT ATC ACCG CGGTTAGATACTGTC TP0050 59427 - 58819 - | hypothetical protein prfA 59578 - 60633 + | peptide chain release factor 1 TERM 66 61229 - 61246 + GT 73 -11.3 -2.78906 | opp_overlap 61211 61212, overlap 61226 61224 GCGCGTACGTTTCGT GCACGCA GATG TGCGTGC TCCTATTCCGTTCTT TP0052 60603 - 61649 + | protoporphyrinogen oxidase (hemK) nrdF 62793 - 61738 - | ribonucleotide-diphosphate reductase subunit beta TERM 67 63723 - 63738 + G 100 -6.1 -5.626 | GAAAGTCTAAATGTT GCGCA AGCGGG TGCGC TTTTTTTGTCCACTA TP0054 62964 - 63923 + | hypothetical protein TP0055 64130 - 64366 + | hypothetical protein TERM 68 65429 - 65443 + G 77 -11.4 -3.21099 | TGAACGTGCTGTTTG GCCGGT ACC ACCGGC TTACTGCTGAGACAA TERM 69 65942 - 65968 + G 85 -13.7 -2.70932 | opp_overlap 65925 65926 TTGGGGCGTGTACTA CGCTACCCGCG CCGGT CGCAGGTAGCG TAGTTAAACACACCG TP0056 64363 - 66144 + | pyruvate carboxylase subunit B TERM 70 66316 - 66288 - g 81 -10.9 -3.60234 | GTACAGAGTTGTAAA GACACGGGGGCAC GAT GTGCGCCGGCGTC GTCCATGCGTGAGGA TERM 71 67049 - 67074 + G 76 -9 -3.76169 | GCTGCGTCCTGTTTC GCGGATAGAG AGAGTA CTCTTTCCGC TTGTCTTGCTCTTGC TP0057 66156 - 67565 + | oxaloacetate decarboxylase, subunit beta (oadB) TP0058 68956 - 67640 - | replicative DNA helicase (dnaB) TERM 72 68987 - 68961 - R 95 -14.5 -3.48395 | ATGCCCGGCACAGAA CCTCCTCCGAG GAATA CTCAGAGGAGG GAAGGTGGTGAAAAG TP0059 69167 - 68940 - | hypothetical protein rplI 69643 - 69173 - | 50S ribosomal protein L9 rpsR 70048 - 69749 - | 30S ribosomal protein S18 TP0062 70695 - 70165 - | single-strand DNA binding protein (ssb) TERM 73 70227 - 70202 - G 70 -3.9 -4.66833 | opp_overlap 70206, overlap 70203 70206 70215 TCTGAACTTGAAAAA TCAGCCTCATC AAGG GACGAGGTTGC GTCCAGTCCTCTTTT rpsF 70985 - 70704 - | 30S ribosomal protein S6 TP0064 71127 - 71702 + | hypothetical protein TERM 74 71801 - 71787 - g 79 -4.2 -5.0538 | GGGGATGCTAAAAAA CCACGT ATT ACGTTG TCCGGATGGTCCTAT TP0065 71776 - 72363 + | hypothetical protein TERM 75 72570 - 72580 + G 93 -8.2 -5.10656 | overlap 72551 72576 AGGCGGACGTGTTGA CCGC ACT GCGG TTTTATTATTTTGCT TP0066 72347 - 72661 + | hypothetical protein TP0067 72649 - 73830 + | hypothetical protein TERM 76 74026 - 74038 + G 70 -6.9 -4.07568 | overlap 74018 74019 ATGGAGTGGTGCTGC GCCCT TTC GGGGC TTTTGCCAGAAGAAA TERM 77 74380 - 74395 + G 72 -7.6 -3.91897 | CAAACAGGCCAGTTG GGTTTC GCGC GAAACC TTTCTGCCTCAGAGA TP0068 74011 - 75033 + | hypothetical protein TERM 78 75077 - 75097 + T 70 -5.4 -4.41348 | overlap 75079 ACGTGTGGCCATGCT CGTTCCTG TTTTT CAGGAAAG TTTCTTTGAGGCAGC TP0069 75619 - 75089 - | hypothetical protein TP0070 75855 - 75469 - | hypothetical protein TP0071 78542 - 75906 - | ATP-dependent Clp protease subunit B (clpB) TERM 79 76272 - 76282 + g 72 -5.4 -4.55093 | overlap 76268 TAATCCCCGTATCTG CTCT GGT AGAG TTTGTTCTTCTGTAG TERM 80 76538 - 76508 - G 75 -4.6 -4.7373 | opp_overlap 76508, overlap 76511 CTACTTCATCAAAAA GAAGTACGCTGTAG GGT CTACGTCGTACCGC TTCTGTCAATTGTCC TERM 81 76535 - 76511 - G 77 -7.1 -4.47707 | opp_overlap 76508, overlap 76508 CTTCATCAAAAAGAA GTACGCTGTAG GGT CTACGTCGTAC CGCTTCTGTCAATTG TERM 82 77181 - 77204 + g 76 -3.8 -4.97402 | gap 1, overlap 77183 CTGCATTGCAGCACG GCGCTC-TAGG AAG CCTGCGAGCTC TTTTTCTAACTTTTC TERM 83 77819 - 77851 + g 81 -10 -3.98661 | gap 1, overlap 77819 CAACCAATGCGCCGA G-GTCAAGGGAAAGC AAAC GCTTTCCCTTGAGGC TTTCTGGTACGTCTC TERM 84 78673 - 78692 + H 74 -2.7 -4.98103 | CGGTGCGCTTTGGCA GGCCGCG GTAAGG CGTAGCC TTTTATATTTTCTTG TP0072 78746 - 79018 + | hypothetical protein TP0073 80629 - 79088 - | hypothetical protein TERM 85 80978 - 80996 + G 74 -7.4 -4.08279 | overlap 80963 80971 CCGTGGTGCGGTGGG CACGGTGT GCT GCACTGTG TTGTTTCTCGCGTGT TP0074 80934 - 82343 + | sugar ABC transporter, periplasmic binding protein (y4oP) TERM 86 82885 - 82895 + G 72 -6.8 -4.19238 | opp_overlap 82884 GGTAAAATCAACTAC GCCT TGC AGGC TTTTGAGCTTGGACC TERM 87 82932 - 82942 + G 72 -4.6 -4.62984 | overlap 82923 82931 GTGGCTTGCGAATCC GCGT CTT GCGC TTTTGTCTGTGATAC TERM 88 83295 - 83314 + G 70 -5 -4.52781 | overlap 83297 GCTTCTGTTTCTCCT GACAAGTC TTTT GACTTGTA TTTTCATTCTCCTTA TERM 89 83297 - 83312 + G 72 -7.6 -3.85899 | overlap 83295 TTCTGTTTCTCCTGA CAAGTC TTTT GACTTG TATTTTCATTCTCCT TP0075 82462 - 83352 + | sugar ABC transporter, permease protein (y4oQ) TP0076 83392 - 84213 + | sugar ABC transporter, permease protein (y4oR) TERM 90 84468 - 84458 - g 85 -3.2 -5.38497 | ATCCAAACGAAAAAA GTAC TCG GCAC AGTTATTGCTTTTTT TERM 91 85048 - 85058 + G 75 -4.6 -4.77036 | TATCGAGCAGCTGCG CTGC GAT GCGG TTTTTCATGCTGCCG TERM 92 85675 - 85713 + G 95 -12.7 -4.09739 | gap 1 AGAGCCGACGGTATA TCCAAAGGTTCTGCGTTT GCGT GAACGT-GAACCTTTGGA TTTTGCGCACCTTGA TP0077 84254 - 85870 + | capsular polysaccharide biosynthesis protein (cap5D) TERM 93 86310 - 86297 - gf 86 -6.7 -5.00884 | opp_overlap 86296 86301, overlap 86301 AGCGTGTTTAAAAAA GGATG CGCG CATCC GTGCTATTGTACCCA TERM 94 86728 - 86758 + GF 84 -6.1 -5.01535 | gap 1, opp_overlap 86727, overlap 86744 ATCTTTTTGCACAAC GCGCGCGT-ATTGC CGCC GCGTTCACGCGTGC TTTTTCTCGTTATGA TP0078 85875 - 87113 + | spore coat polysaccharide biosynthesis protein (spsC) TERM 95 87491 - 87501 + GF 70 -6.8 -4.07885 | opp_overlap 87490 GCGGTGCAAGGAGAT GCAG AAA CTGC TTTTAAACGCGCATC TP0079 87041 - 89263 + | hypothetical protein TERM 96 89431 - 89445 + G 85 -2.8 -5.4505 | overlap 89433 GGGGAGGCAGTATCC GCGTAT ATC ATACCC TTTTTTCTTGCGCAC TP0080 89260 - 89727 + | quinoline 2-oxidoreductase TP0081 89734 - 90582 + | hypothetical protein TP0082 92431 - 90629 - | formate hydrogenlyase transcriptional activator (fhlA) TERM 97 93709 - 93698 - g 81 -5.8 -4.84359 | GCAGGGGTATAAAAA CGGA GCGC TCCG TAAGGAAGAAATTCA TERM 98 94159 - 94198 + G 76 -10.7 -3.35996 | gap 2 CCGCAACCGGGTGCT GGCCCGCAACC-GGGT-GG TCAT CCGACCCTGGGTGCAGGCC TTCTACCTACCGGTC TP0083 93177 - 94457 + | hypothetical protein TP0084 94670 - 94437 - | hypothetical protein TERM 99 94573 - 94584 + g 100 -3 -5.65177 | CCTTCGGGGGAAGTC GATT CAGC AATC TTTTTTTCTACATCT TP0085 95230 - 94784 - | PTS system, nitrogen regulatory IIA component (ptsN-1) TERM 100 95931 - 95943 + G 70 -4.7 -4.56597 | overlap 95932 GAAGTTTATCATGAT GGGCG TTG CGCCG TTTTTGAAAGGCAAG TERM 101 96172 - 96221 + G 81 -12.8 -3.14528 | overlap 96220 ACGGACGAGGACTGC TCTGCGGCGTCTGCCGGCGATC CAGGGC GGTCGTCAGCAGGCGCTGAAGG TATTGACCTTTCTGT TP0086 95311 - 96255 + | hypothetical protein TP0087 96797 - 96258 - | hypothetical protein TP0088 97395 - 96781 - | hypothetical protein TERM 102 97449 - 97470 + r 100 -8.7 -5.08601 | GTTGTGTGGGTCCTT GCGTGCCTT GGCG AGGGTACGC TTTTTCTTAAAATAG TP0089 98660 - 97425 - | cyclic nucleotide binding protein TERM 103 98170 - 98182 + g 78 -9.1 -3.92178 | GCTTCCTCTGCATAC GTCCC CTT GGGAC TTTCCTTGAGATAAT TERM 104 98277 - 98288 + g 81 -4.4 -5.1287 | AAGATGCGAGACATC CACA TCAG TGTG TTTTTTCAATGTCAA TP0090 99807 - 98743 - | UDP-N-acetylmuramate dehydrogenase (murB) TERM 105 99725 - 99675 - G 100 -19.1 -3.61398 | overlap 99716 GCGCTTCCTCAATAA GCGC-GCGCAGCTGTGTGCAGGAGC GCG GCTCC-GCCCAAAACTGCGCAGCGC CACCAATGCGGAAAG TERM 106 100282 - 100306 + G 72 -5.7 -4.58663 | gap 1, overlap 100286 CCACTCGGTGTTGCA GGTTGCAGCG CACTAT CGC-GCAGCC TTTTTCCGCGATACT TERM 107 100992 - 101004 + G 77 -3.3 -5.08601 | overlap 100975 TGAGTGGACAGTATC GCACG CAA CTTGC TTTTTCTTGGGATGC TERM 108 101039 - 101028 - g 77 -7.2 -4.58395 | opp_overlap 101033, overlap 101029 101030 GGGATGCGCTAAAAA CGGC GCGT GCCG CCCGACGGAGTTTTG TP0091 99989 - 101551 + | cysteinyl-tRNA synthetase (cysS) TP0092 101622 - 102110 + | RNA polymerase sigma-24 factor (rpoE) TERM 109 102583 - 102627 + G 74 -10 -3.52102 | gap 1 GCGAATTCCAACGTG CTGCGCAAACCAGCTG-CGGT GTTC ACCGTCTGTGCGTTTGCGCAG TTGTATGGCTCAGAT TP0093 102094 - 102741 + | hypothetical protein TERM 110 103062 - 103043 - g 78 -5.7 -4.8048 | overlap 103045 103054 GCGTGATATCAAAAA CACCGCA GACAGG TGCGGTA TCGACCTTACCGACA TP0094 102879 - 103889 + | phosphate acetyltransferase (pta) TERM 111 105453 - 105474 + G 70 -3.6 -4.63527 | opp_overlap 105444, overlap 105454 ACCACATCGAGTTGC TCGCCTCG GGTGAG CGAGGGGG TTTTTGGGGTACTCG TERM 112 105531 - 105512 - g 83 -6.3 -5.00616 | TTTGCGCGTAAAAAA GCCGGCC AGTACA GGCAGGC TGCAATTATCTACCG TP0095 103889 - 105835 + | hypothetical protein TP0096 106271 - 105909 - | dnaK suppressor, putative TERM 113 106208 - 106227 + g 85 -13.6 -2.79915 | opp_overlap 106207 TGGTTGTCAGCGAAC GCGCAAGC GAGC GCTTGCGC TCTACTAAGCTCACT TP0097 106441 - 106659 + | translation initiation factor 1 (infA) TERM 114 106663 - 106682 + T 72 -12.2 -2.82104 | opp_overlap 106679, overlap 106660 106674 106679 CGTGAGCGTTAGATT CCTCTCTC GCAG GAGAGAGG TGCTTGCTCCTCTTT TP0098 107369 - 106719 - | heat-shock protein, putative pyrH 108128 - 107373 - | uridylate kinase TP0100 108323 - 108925 + | thioredoxin, putative TP0101 108918 - 109712 + | cytochrome c biogenesis protein (ccdA) TP0102 111723 - 109750 - | rep helicase, single-stranded DNA-dependent ATPase (rep) TERM 115 109862 - 109883 + g 85 -8.7 -4.57341 | gap 1, opp_overlap 109861 109862 ATTTCGTCCAGAAAG GGGGAG-GCG GTG CGCTCTTCCC TTTTTCCGCCGCGTT TERM 116 110304 - 110326 + g 77 -7 -4.56775 | opp_overlap 110305 110306, overlap 110305 110306 GAATGTCTTCAACAA ATTTGCGTAC CTT GTACGCAAGA TTTTTCCCCGAAAGT TERM 117 110325 - 110305 - G 78 -8.3 -4.15788 | opp_overlap 110304 110305 110306, overlap 110306 AATGTCTTCAACAAA TTTGCGTAC CTT GTACGCAAG ATTTTTCCCCGAAAG TERM 118 110305 - 110325 + g 76 -10.5 -3.33744 | opp_overlap 110305 110306, overlap 110304 110306 AATGTCTTCAACAAA TTTGCGTAC CTT GTACGCAAG ATTTTTCCCCGAAAG TERM 119 110324 - 110306 - G 75 -11.8 -3.08991 | opp_overlap 110305 110304 110306, overlap 110305 ATGTCTTCAACAAAT TTGCGTAC CTT GTACGCAA GATTTTTCCCCGAAA TERM 120 110306 - 110324 + g 73 -11.8 -2.60032 | opp_overlap 110306 110305, overlap 110305 110304 ATGTCTTCAACAAAT TTGCGTAC CTT GTACGCAA GATTTTTCCCCGAAA TERM 121 111614 - 111632 + g 72 -6.7 -4.18494 | gap 1, opp_overlap 111591 111607, overlap 111613 AGCATATACGCGATG CGCGCCGT GATT ACG-CGCG TTTTCCCTGAGCCTG TERM 122 111924 - 111935 + G 83 -5.8 -4.89233 | overlap 111928 ACGTCATAGCGCGTA CTGC CCAA GCAG TTTTTGGTATTCGTG TERM 123 112591 - 112629 + G 81 -9.5 -4.09805 | gap 1, opp_overlap 112589 GATACTCACACAACC TGCGCTGCGCG-CACGCG TGCG TGCATGTCGCGTTGCGCA TTTGGTTATTGATGA TERM 124 112893 - 112919 + G 71 -2.9 -4.74611 | overlap 112894 CGGCACTGACTCAAC TTGTAGCGCGT TGTGT GCGCCCTGCAG TTATTTTTTGTGCTC TERM 125 113202 - 113215 + G 95 -6.7 -5.22006 | opp_overlap 113202 CAGGACGGGACGGAA TGCGT GCAG ACGCA TTTTTATTGTGGTCA TERM 126 113381 - 113397 + G 88 -8.7 -4.60797 | overlap 113382 GCCGGATGTGATGTG TGTGCAG GCA CTGCACG TTTTGTATGTGAGGA TERM 127 113382 - 113396 + G 72 -10 -3.35996 | overlap 113381 CCGGATGTGATGTGT GTGCAG GCA CTGCAC GTTTTGTATGTGAGG TP0103 111788 - 113611 + | ATP-dependent DNA helicase, putative TERM 128 113683 - 113699 + F 72 -3.6 -4.83169 | overlap 113685 113686 AGTTGCCTTGTATAT TCCGCG AGTTA CGCGCA TTTTTATGGCCGAGT TP0104 113858 - 115639 + | 5'-nucleotidase (ushA) TERM 129 115691 - 115661 - f 87 -15.6 -2.87522 | opp_overlap 115656 115671, overlap 115671 GTAACTTACATTAGA GGCCTGTAAAGAAC TAC GTTCTTTACAGGCT GTGCCAATCTGCTTT TP0105 115806 - 118799 + | DNA polymerase I (polA) TP0106 120363 - 118831 - | carnitine transporter, putative TP0107 121921 - 120344 - | licC protein (licC) TERM 130 122177 - 122145 - R 84 -5.7 -5.08011 | opp_overlap 122148, overlap 122146 122148 122165 122166 AAAATCTGGAAAAAA CGACGCCC-CACACT GAGGA AGTGTACGGGCGT-G TTCGCCCGCCGTCAA TERM 131 122230 - 122205 - R 77 -3.9 -5.12617 | CAAGCACGCAAAAAA CAGGGGAAAAA GCAC CCCCCCCCCTG CTCGCTTCCTGCACA TP0108 123660 - 122275 - | diphosphate--fructose-6-phosphate 1-phosphotransferase TP0109 124640 - 123762 - | rRNA methylase, putative TERM 132 123936 - 123924 - G 74 -10.5 -3.14132 | opp_overlap 123917 123914 GTGCGTGCGCAGCAA CGGCG AAA CGCCG TGCCCCTCGTTGCCT TERM 133 124883 - 124873 - H 70 -5.4 -4.52589 | CTGCTTGACAGAAAA TACG TGT CGTA CTAGCCTGGGCCTCC TERM 134 125357 - 125342 - g 86 -6 -5.16151 | opp_overlap 125351 GAAAGTCAAGAAAAA GCGCGC CTTT GCTCGC TGGGATACCAGAGAG TERM 135 125536 - 125547 + G 79 -4.4 -5.00616 | opp_overlap 125528 125536 ACGTAAAGGAAAAAA CCTT CACA AAGG TTTTTTACGACAAGA TERM 136 125547 - 125536 - g 90 -4.4 -5.38497 | opp_overlap 125536, overlap 125528 ACGTAAAGGAAAAAA CCTT CACA AAGG TTTTTTACGACAAGA TERM 137 126125 - 126136 + G 70 -4.4 -4.54477 | overlap 126134 TTTATCGCACAGCAT TCCT ATTG AGGA TTTTGTCCGTTTTGC TP0110 125181 - 126914 + | hypothetical protein TERM 138 126912 - 126926 + F 76 -5.6 -4.70453 | opp_overlap 126904, overlap 126904 126913 GAAACTACGCACCTG TGAGCG TTT CGCTCC TTTTCTGTATTCCTT TERM 139 127420 - 127410 - g 85 -3.2 -5.4505 | CCCTTCAAGAAAAAA TACC GCA GGCA ATAGCGCTCATTCAA TERM 140 127502 - 127512 + G 70 -6.8 -4.09822 | overlap 127493 GTCCAAGCGCGGCTG CGCT TTG AGCG TTTCTCTGATCCCTT TP0111 126974 - 128401 + | RNA polymerase sigma-54 factor (rpoN) TP0112 129750 - 128398 - | aminopeptidase C (pepC) TERM 141 128962 - 128976 + g 71 -2.8 -4.87389 | ATCCGCAGTTGGCGC GTGAAT CAA ACTCAC TTTGTTTTTAAGATC TERM 142 129135 - 129145 + g 78 -5.4 -4.87665 | opp_overlap 129135 AGTAGATGGAAGAAA GGAA CGC TTCC TTTTTCTCCCTCAGG TERM 143 130508 - 130482 - g 81 -9.4 -4.11216 | CGTGCAGCTGCAAAA TGTTGTTCCTCC TCA GGAGGTACAGCA AGCGTTTGAAGACGT TP0113 129892 - 130878 + | lambda CII stability-governing protein (hflK) TP0114 130883 - 131878 + | lambda CII stability-governing protein (hflC) TP0115 132712 - 131903 - | phosphomethypyrimidine kinase (thiD) TERM 144 134094 - 134105 + G 70 -5.8 -4.19817 | TTGAACAACTGATTC GTCC CACT GGAC TTTTAGATCCATGCA TERM 145 134681 - 134669 - g 100 -3.3 -5.65513 | overlap 134671 134672 CAGGAAGTAAAAAAA GACGC TGC GCGTG TACAGGTCGCACCCC TERM 146 134710 - 134671 - g 74 -6.4 -4.45473 | gap 1, overlap 134669 134672 GGAAGTAAAAAAAGA CGCTGCGCGTGTACAGG TCGCACC CCTGTTG-CGCGCAGCA GACGCAGACGTGCGC TERM 147 134771 - 134748 - g 100 -4.6 -5.47218 | gap 1, opp_overlap 134764, overlap 134749 134750 CTGCACGCAAAAAAA TGGTACAGGCG TTG CGCCTACA-CA TGAAGGTTTGTGCGC TP0116 132863 - 134869 + | excinuclease ABC subunit B TP0117 136697 - 134901 - | TPR protein C (tprC) TERM 148 136442 - 136480 + g 83 -13.2 -3.00525 | gap 1, overlap 136436 TCAGCTGCAGCTGTG CCCACACCC-CTGAGCG TGCCTC CCCTCGGCGGGTGTGGG TGTGCTTTGACACCA TP0118 138042 - 136777 - | hypothetical protein TP0119 138799 - 138140 - | amino acid ABC transporter, permease protein (yaeE) TERM 149 138259 - 138275 + g 77 -12.3 -2.79302 | GGAAGCGCTGATACC CGTAGCG GAT CGCTACG TCTCCTAAACCTCCT TP0120 139608 - 138799 - | amino acid ABC transporter ATP-binding protein TP0121 139738 - 140805 + | hypothetical protein TP0122 142881 - 141025 - | phosphoenolpyruvate carboxykinase TERM 150 141739 - 141722 - G 74 -7.7 -4.12188 | opp_overlap 141722 141710 141723, overlap 141723 GCAGGAGCGGTAAAA CGCGCAT TCGG ATGCGCA ATTTCTTCTCCTTTT TERM 151 143872 - 143851 - g 95 -15.1 -3.21595 | opp_overlap 143862, overlap 143862 143863 AAGCTTTATTACGAA GCGGCGCCA AATG CGGCGCCGC CGCCCATTTATGTAG TERM 152 143875 - 143863 - g 70 -10.5 -2.72461 | opp_overlap 143862, overlap 143851 143862 GAAGCGGCGCCAAAT GCGGC GCC GCCGC CCATTTATGTAGACC TERM 153 144651 - 144682 + G 76 -3.6 -5.00138 | gap 1, overlap 144653 144654 CGATGATGCAGAACA GCTGCGCGACGGTGA TTT TCTCTGTTCCGC-GC TTTTTCATTTGAGTA TERM 154 145547 - 145522 - g 82 -9.1 -4.27316 | gap 1, overlap 145523 TTTTGGAATGCAAAA CTGTTTGCC-GC CGC GCAGGCAAACAA ACTCATTTAAAGCAG TERM 155 145546 - 145523 - g 70 -10.4 -3.16068 | gap 1, overlap 145522 TTTGGAATGCAAAAC TGTTTGCC-GC CGC GCAGGCAAACA AACTCATTTAAAGCA TP0123 142987 - 145557 + | hypothetical protein TP0124 145571 - 146677 + | translation-associated GTPase TERM 156 147008 - 147025 + G 70 -6.2 -4.183 | opp_overlap 146983 GCTGTTCAGTAAGCG CGCGCC AGATGC GGTGCG TTTCTTCGGGGTTCC TP0125 146754 - 147548 + | exodeoxyribonuclease (exoA) TP0126 148487 - 147612 - | hypothetical protein TERM 157 148362 - 148383 + g 89 -13.1 -3.29511 | overlap 148366 CCCACGGCTGTTTGT CGAACCCTT TTTA AAGGGTTCG TTCTCGCGCGCTGGG TERM 158 149038 - 149077 + G 100 -17.3 -3.19463 | opp_overlap 149049 GCAGGGGACTACTGT TGCCTCCAACACCGTGT TCCCGT GCACGGTCTTGGAGGCA TTGGTGCGTGATCCG TP0127 148595 - 149284 + | hypothetical protein TP0128 149473 - 149820 + | hypothetical protein TERM 159 150125 - 150138 + G 100 -8.1 -5.5112 | overlap 150124 GTACCAGGAGCAGGG GCTGC AGCA GCAGC TTTTTTGTTCGTACC TP0129 149805 - 150281 + | hypothetical protein TP0130 151029 - 150610 - | hypothetical protein TP0131 152897 - 151101 - | TPR protein D (tprD) TERM 160 152642 - 152680 + g 83 -13.2 -3.00525 | gap 1, overlap 152636 TCAGCTGCAGCTGTG CCCACACCC-CTGAGCG TGCCTC CCCTCGGCGGGTGTGGG TGTGCTTTGACACCA TP0132 153151 - 152942 - | hypothetical protein TP0133 154368 - 153136 - | hypothetical protein TP0134 155495 - 154365 - | hypothetical protein TP0135 156388 - 155447 - | hypothetical protein TERM 161 155642 - 155662 + gH 75 -5.4 -4.59109 | gap 1, overlap 155646 GTAGAATTTTGGAAG GCTGTGTGG GTTG CC-CGCAGC TTTTTGAAAGGTGTG TERM 162 156598 - 156622 + H 71 -9.9 -3.51232 | opp_overlap 156592, overlap 156591 156594 AAAACAATACGCAGG GCGCTTAGCTC AGC GGGCAGAGCGC TTGGTTTACACCCAA TERM 163 157735 - 157713 - g 100 -7.7 -5.33405 | opp_overlap 157727, overlap 157727 CTCACCAAAGAAAAA GTGTACTGC AGAAA GCAGGACAC CGCTTCCTCCGCTGC TERM 164 157940 - 157922 - g 75 -6.7 -4.42806 | CTACGGGGAAATAAA GCTGGAA GCGAA CTCCAGC GGTACGAACGGCACC TERM 165 158252 - 158286 + G 79 -3.5 -5.12172 | gap 1, opp_overlap 158254 GTGGAAGTTTGACAC CACCACG-TGCTCCTG GAAC CGCGAGTAACGGGGTG TTTTCTTTCTTCATC TP0136 156792 - 158279 + | hypothetical protein TP0137 158258 - 158395 + | hypothetical protein TP0138 159270 - 158533 - | hypothetical protein TP0139 159970 - 159278 - | hypothetical protein TP0140 161737 - 160010 - | K+ transport protein (ntpJ) TERM 166 160393 - 160377 - G 70 -6.5 -4.24294 | overlap 160380 ATGAATGAGCGAAAA GAAGCGA TAA TCGCTGC CGCTGTATTAAGTTT TERM 167 160390 - 160380 - G 72 -6.8 -4.23486 | overlap 160377 AATGAGCGAAAAGAA GCGA TAA TCGC TGCCGCTGTATTAAG TERM 168 161048 - 161072 + g 82 -2.1 -5.40464 | overlap 161036 161051 161057 CACCAGATGCGAGGC GACGAGTCT GCTTTCG AGGCTCATC TTTTTCTTTATGGTG TERM 169 162251 - 162240 - g 71 -2.2 -4.91511 | ACGGCACGACAAAAA GCTA TGCA CAGC TTTCACAGGACATCG TERM 170 162388 - 162399 + G 81 -4.4 -5.14563 | TTTTGCGTACGGGAG TGCT CTCA AGCA TTTTTTGCTGCAGCA TP0141 161909 - 162442 + | methylated-DNA-protein-cysteine S-methyltransferase (dat) TP0142 163055 - 162393 - | thiamine ABC transporter, ATP-binding protein, putative TERM 171 162889 - 162875 - G 73 -4.2 -4.82901 | overlap 162877 162879 TTCCGGCGATAAAAA CCGATC CAT GATCTG GAGTGATAAGGCCTG TP0143 164829 - 163048 - | thiamine ABC transporter, permease protein, putative TERM 172 163780 - 163761 - GR 82 -5 -5.03409 | TGAGAAAAAAAAGAA TTCCGCAC AGCA GTGCAAAA AATCCTATGCGCTCA TERM 173 164150 - 164109 - GR 100 -13.7 -4.54047 | gap 1, opp_overlap 164116 TGATGGTATAGAAAA CTCTATACGCGCGCGCGCCT AAC AGGCGCGCG-GCGTCTTCAG CGTCTGCGGAGATGG TERM 174 164116 - 164143 + gr 100 -19.2 -3.05343 | gap 1, opp_overlap 164109 ATAGAAAACTCTATA CGCGCGCGCGCCT AAC AGGCGCGCG-GCG TCTTCAGCGTCTGCG TERM 175 164402 - 164391 - GR 86 -7.2 -4.74132 | opp_overlap 164396 AGAGTGCAGGAAAAA GCGC CCGC GCGC GAAGGGAGCGTTTTA TERM 176 164638 - 164626 - GR 83 -6.2 -4.96848 | CGGTTTAGAGAAAAA GGCG CTTCC CGCC GTGAACACGGGGATA TP0144 165794 - 164787 - | thiamine ABC transporter, thiamine-binding periplasmic protein, putative TERM 177 166862 - 166876 + G 74 -6.4 -4.46617 | TGCGTAAGAAAGGGG GTGTTG CTG CAGCAC TTTTCCATTTCTTTT TERM 178 166939 - 166968 + G 70 -5.7 -4.3739 | gap 1, overlap 166957 166958 166960 CGCAGCGTGTTTGGG CTGCGTACGCATAC CAC GCGT-CGTGCGCAG TTTTGTGCGCCGCTG TERM 179 167108 - 167127 + G 71 -2.8 -4.87273 | overlap 167109 167112 CAGGGGGGGGCGCGC TTCCTCCA AATG TGGATGAG TTTTTGTACGCTATT TERM 180 167375 - 167355 - g 71 -2.4 -4.91109 | opp_overlap 167356, overlap 167356 GGGGTACTATAAAAA TCCTGAGC TTACC GCGCAGGT GTTAGATGCAGACGG TP0145 165904 - 167874 + | long-chain-fatty-acid--CoA ligase TERM 181 167934 - 167946 + T 74 -10.5 -3.53444 | opp_overlap 167930 TGCTCCGCAAACCCT GGCCC GCG GGGCC TTTGCGGCGGACTGG TERM 182 168387 - 168406 + T 71 -5.7 -4.37157 | CGCTTTGCACCACGC TGGGGGT AGTGAC ACCCTCA TTTCTTATCATCGTT TERM 183 168912 - 168933 + T 74 -10.9 -3.50456 | overlap 168908 168905 TGCAGGTATAGCAGG TGCGCTTGT GTGC ACGAGCGCA TTGGTGTTTCCTTCG TERM 184 169184 - 169194 + T 74 -2.4 -5.06414 | TGTTTTTGGTGTTAT GCGC ACT GAGC TTTTTCTTCAAAAGG TP0147 171138 - 169279 - | alpha-amylase 1, putative TERM 185 169680 - 169698 + g 88 -2.5 -5.52384 | gap 1, opp_overlap 169696 GAACTTGTACGCCTT CAG-ACTT AAAA AAGTACTG TTTTTTTAATGAAAC TP0148 171713 - 171135 - | hypothetical protein TERM 186 171331 - 171321 - G 87 -4.6 -5.24799 | GGAGAAACATAAAAA GCCG ACA CAGC TCACTCCCCACATAA TP0149 172300 - 171707 - | hypothetical protein TP0150 172760 - 172293 - | hypothetical protein TERM 187 172355 - 172343 - G 72 -10.5 -3.12351 | TTTTTCTACACTGAA GCGCG ATG CGCGC ACTCGATATGCCATA TERM 188 172386 - 172374 - G 86 -9.1 -4.41548 | CGATATGCCATAAAA GCGTG CAT CACGC GGTGTAGGGTGATTA TERM 189 172626 - 172644 + g 81 -4.5 -5.07652 | opp_overlap 172621 TGCAAGGATATCTGC GGCGC AGGTGATGA GCGCC TTTTCTTTTAAAAAA TP0151 173763 - 172744 - | hypothetical protein TERM 190 173647 - 173631 - G 100 -13.7 -5.1101 | TGACGATGGAAAAAA GCGCGAC CGT GTCGCGC ATGGCTGCAACGACG TP0152 175294 - 173750 - | nitrogen fixation protein (rnfC) TERM 191 173975 - 173991 + g 81 -4.3 -5.10461 | overlap 173976 AGTAAACTGATTACG GTGTGCG GCA CGCGCAA TTTTTATTGGGTCAA TP0153 175861 - 175370 - | hypothetical protein TERM 192 175730 - 175718 - G 88 -2.6 -5.48054 | AGCAAAATCAAAAAA GCCG TGCAC CGAC CGTATAGCCGACCTT TERM 193 176887 - 176901 + G 100 -11.4 -5.96521 | AGTCAGCACGGGAAT GCGCGT TAC ACGCGC TTTTTTTTGCTTGCT TP0154 176086 - 177123 + | hypothetical protein TERM 194 177526 - 177514 - g 71 -3.3 -4.76041 | opp_overlap 177516, overlap 177516 GACAGCTACTAAAAA TCCCC TCA GTGGA CGGCATTTTATATAC TP0155 177129 - 178244 + | hypothetical protein TP0156 178689 - 178285 - | hypothetical protein TP0157 179588 - 178686 - | hypothetical protein TP0158 180271 - 179585 - | hypothetical protein TERM 195 179627 - 179640 + g 70 -3.9 -4.61231 | TGCAAGGTGTGCGGG CAATT CATA AATTG TTTTTACGCGTGTCA TP0159 181303 - 180275 - | hypothetical protein TERM 196 181184 - 181169 - G 79 -4.6 -4.91109 | GTCGTAGCACAAAAA GCCAAC CCAT GTGGGC GATTTCCACGAATAG TP0160 183272 - 181419 - | prolyl-tRNA synthetase TERM 197 181506 - 181495 - G 82 -2.2 -5.40072 | opp_overlap 181497 181497 181505, overlap 181497 181498 TCTTGCGTAAAAAAA TACG TGTG CGCA CCACACCGTGTTGTG TERM 198 182377 - 182359 - G 70 -5.3 -4.39426 | gap 1, overlap 182361 CACACTGCCACAAAA TG-CCCAG CCGC CTGGGGCA CCGTGTCAATGCGGT TP0161 183367 - 183275 - | hypothetical protein ruvB 184436 - 183384 - | Holliday junction DNA helicase B TERM 199 184309 - 184319 + g 82 -3.2 -5.20781 | GCCTGAATGAAAAGA CGTA AGT TGCG TTTTGTTTTCTCCTG TERM 200 184509 - 184521 + H 79 -3.3 -5.13722 | overlap 184508 AGCTCGAGAGGTCCG CGCCA GAG TGCCG TTTTCTTTTCCTGAA TP0163 184611 - 185537 + | ABC transporter, periplasmic binding protein (troA) TP0164 185685 - 186485 + | ABC transporter, ATP-binding protein (troB) TP0165 186457 - 187353 + | ABC transporter, permease protein (troC) TERM 201 187732 - 187744 + G 70 -4.8 -4.46531 | GAAATTGGACTTGCG CCCT TGGAT AGGG TTTCGTTTTTTGCTT TERM 202 188070 - 188083 + G 81 -4.5 -5.08601 | GCTCGCCTCTTGTGC GTCCA TTAG TGGGC TTTTTCTTGCGGTGA TP0166 187357 - 188460 + | ABC transporter, permease protein (troD) TP0167 188470 - 188931 + | cation-activated repressor protein (troR) TP0168 189011 - 189766 + | phosphoglycerate mutase (pgm) TERM 203 189982 - 190027 + F 82 -5.4 -5.09895 | gap 1, overlap 189984 TTCCGTTCATTTATC GGTGTGCCTTG-TGGTCGGGG CTTTT TCCTGACCTTCAAGGGACAGC TTTTTTCCGTGCCTG TERM 204 190046 - 190057 + G 70 -3.6 -4.60746 | overlap 190054 TTTCCGTGCCTGGGT TGCG AGTG CGCG TTTTCGTGTTTTTCA TP0169 189990 - 190088 + | hypothetical protein TP0170 190085 - 190894 + | pfs protein (pfs) TP0171 190994 - 191422 + | lipoprotein, 15 kDa (tpp15) TP0172 192097 - 191570 - | hypothetical protein TP0173 192815 - 192132 - | hypothetical protein TP0174 193626 - 192784 - | hypothetical protein TP0175 194008 - 193376 - | hypothetical protein TP0176 194305 - 194039 - | hypothetical protein TP0177 195612 - 194302 - | hypothetical protein TERM 205 194369 - 194380 + g 93 -5.8 -5.26316 | ATGAGAGTTTGTGTT CCCT GAGA AGGG TTTTTTCTCAGGTGA TERM 206 194508 - 194521 + g 81 -5.9 -4.87665 | TGCGTTCAAAGTAGT GGCGG AGCA CTGCC TTTTTGTGGATGCGC TERM 207 195512 - 195479 - G 81 -10.3 -3.91946 | gap 1, overlap 195480 AAGAAAGAATGCAAA CTGCG-CGCAGTCTGG TCT CCAGACTGCGTCCCAC TGGATATCGGATGAA TERM 208 195511 - 195480 - G 86 -13.8 -2.93541 | gap 1, overlap 195479 AGAAAGAATGCAAAC TGCG-CGCAGTCTGG TCT CCAGACTGCGTCCCA CTGGATATCGGATGA TP0178 196632 - 195706 - | hypothetical protein TERM 209 196192 - 196177 - G 70 -6.8 -4.0616 | overlap 196185 TACGGCAAGGATAAA GGAACG CACG CGCTCC TCGCCTGATGCATCA TP0179 198515 - 196632 - | hypothetical protein TERM 210 196991 - 197010 + gr 91 -10.8 -4.28254 | TATCTTCGCGCTGGG TGTCTTCG TCGT CGAAGACA TTTTCAGTATTGAGG TERM 211 198111 - 198088 - GR 71 -9.6 -3.46178 | overlap 198078 ACAAAGCCACGAGAA TCCTCTGCAG AGGA CTGCACAGGA AGCGCACGGTACACA TP0180 198615 - 198457 - | hypothetical protein TERM 212 198662 - 198673 + GH 73 -3.6 -4.82901 | GCGCTGAACAGCTAC GGTG TACT CGCC TTTTTCTGGGGAGAG TP0181 198608 - 199051 + | hypothetical protein TP0182 198891 - 199670 + | hypothetical protein TP0183 200518 - 199673 - | hypothetical protein TERM 213 200316 - 200304 - G 81 -9.1 -4.07568 | opp_overlap 200303 200299 200304 CCTTTTTCGGGAAAA CGGTG CGG CACCG CTTGCTCTCTGCAAT smpB 200987 - 200523 - | SsrA-binding protein TP0185 201075 - 201782 + | signal peptidase I (sip) TP0186 201837 - 203018 + | oxygen-independent coproporphyrinogen III oxidase, putative TERM 214 203253 - 203270 + F 71 -7.7 -3.99678 | gap 1 CGCGCTGGTTGTGCG CGGTGCCT GAG AGGC-CCG TTTGGTTGTAGCGCT TERM 215 204156 - 204145 - g 72 -4.4 -4.71828 | opp_overlap 204133 AGCCCACTAAGAAAA CAGT GGTT ACTG GCATTGAGATGTTTA TP0187 203382 - 204569 + | elongation factor Tu rpsJ 204641 - 204949 + | 30S ribosomal protein S10 rplC 204996 - 205622 + | 50S ribosomal protein L3 rplD 205636 - 206286 + | 50S ribosomal protein L4 rplW 206273 - 206557 + | 50S ribosomal protein L23 rplB 206613 - 207434 + | 50S ribosomal protein L2 rpsS 207444 - 207731 + | 30S ribosomal protein S19 TERM 216 207843 - 207854 + G 70 -7.2 -4.09739 | GCAAGCCGTATGTGC GCGC GATG GCGC TTTTGGGACACTTAC rplV 207740 - 208114 + | 50S ribosomal protein L22 TERM 217 208475 - 208485 + G 81 -6.8 -4.7261 | overlap 208465 TGTTGCTCGCCAACT CACG GCG CGTG TTTCTTTTCGTAAGT TERM 218 208626 - 208611 - g 70 -4.6 -4.57755 | opp_overlap 208625 ACTGAGGAGATAAAA GAGGGG CGTA CGCCTC TGCACACGCTGCGCG rpsC 208098 - 208841 + | 30S ribosomal protein S3 rplP 208845 - 209264 + | 50S ribosomal protein L16 TP0197 209279 - 209497 + | ribosomal protein L29 (rpmC) rpsQ 209512 - 209766 + | 30S ribosomal protein S17 rplN 209779 - 210147 + | 50S ribosomal protein L14 TERM 219 210252 - 210267 + G 70 -6.1 -4.25848 | GTGCTGCGTGTGCTC CGCGA CGTAGA TCGCG TTTTGGTGCAGGGTT rplX 210159 - 210470 + | 50S ribosomal protein L24 rplE 210467 - 211024 + | 50S ribosomal protein L5 rpsN 211036 - 211221 + | 30S ribosomal protein S14 rpsH 211237 - 211635 + | 30S ribosomal protein S8 rplF 211645 - 212184 + | 50S ribosomal protein L6 TERM 220 212293 - 212313 + G 77 -9.8 -3.65351 | GCCCTCGGATGACGG TGTTCCGA AGTAA TCGGAACA TTTCGGTGCAGGTCA rplR 212193 - 212555 + | 50S ribosomal protein L18 rpsE 212564 - 213082 + | 30S ribosomal protein S5 rpmD 213085 - 213270 + | 50S ribosomal protein L30 TERM 221 213453 - 213463 + G 71 -2.4 -4.89852 | overlap 213443 213452 CTATATCGGCGTGTG CCGC GGC GGGG TTTTTCTAACTGTGC rplO 213270 - 213731 + | 50S ribosomal protein L15 secY 213739 - 215091 + | preprotein translocase subunit SecY rpmJ 215096 - 215209 + | 50S ribosomal protein L36 rpsM 215225 - 215590 + | 30S ribosomal protein S13 TP0211 215608 - 215988 + | 30S ribosomal protein S11 TP0212 216003 - 217058 + | DNA-directed RNA polymerase subunit alpha TERM 222 217234 - 217250 + G 83 -5.8 -4.88918 | gap 1, opp_overlap 217233 217234 GACTCTGTGCATAAC CGGCGCC AGGT GGC-CCG TTTTATTTGGGATAA rplQ 217048 - 217542 + | 50S ribosomal protein L17 TP0214 217566 - 217763 + | hypothetical protein TP0215 217969 - 218631 + | grpE protein (grpE) TERM 223 219698 - 219680 - g 72 -8.8 -3.74693 | overlap 219682 TTTGAGCGGACCAAA GAGCCTTG CCG CAAGGCGC TCAAAGACGCCGGAA TERM 224 219696 - 219682 - g 74 -10 -3.4582 | overlap 219680 TGAGCGGACCAAAGA GCCTTG CCG CAAGGC GCTCAAAGACGCCGG TERM 225 220566 - 220550 - g 85 -13.7 -2.77994 | overlap 220541 TATAAACGTCAAGCA GCAGCGG GTG CCGCTGC AGGTAAGAAGAGTGA dnaK 218747 - 220654 + | molecular chaperone DnaK TERM 226 220728 - 220757 + F 83 -12.1 -3.65693 | CCCCAGGCCTTTTGT GATCCGGGTGTTC GCCT GATCGCCCGGGTC TTTCGGCTGTCTAGT TERM 227 220979 - 220969 - g 74 -2.4 -5.10877 | opp_overlap 220975 AGAAGAAATCAAAAA GGCG TAC CGGC GGCTGGCTATTCAGT dnaJ 220775 - 222024 + | heat shock protein TERM 228 222678 - 222692 + G 70 -5 -4.54047 | ACACGCACGTATGAT CTTGTG CTT CATAAG TTTTCTATGGACTAC TP0218 222201 - 223670 + | sigma factor SigB regulation protein, putative TERM 229 224058 - 224069 + G 74 -3 -4.95302 | opp_overlap 224052, overlap 224052 AGTTTTAAATTTTAC CAAA ATTA TTTG TTTTCTTCTGTTTCG TERM 230 224372 - 224383 + G 73 -3.6 -4.73682 | TAAAGAAGTGGTGTT TGCG CTAT CGCG TTTTGTGTTATGCAC TERM 231 224533 - 224543 + G 74 -3.2 -5.01732 | ATTATGCCTTTGATG CATG TAG CGTG TTTTTTGGGGAAATT TP0219 223674 - 225821 + | sigma factor SigG regulation protein, putative TP0220 225850 - 226176 + | anti-sigma F factor antagonist (SpoIIAA-1) TERM 232 226452 - 226471 + G 70 -5.6 -4.34482 | overlap 226462 GCCGAAGCATCTGGT GCCGGTGC GTGA GCAGTGGC TCTTTTTTTCAAAGG TERM 233 226462 - 226473 + G 95 -5.8 -5.40072 | overlap 226452 CTGGTGCCGGTGCGT GAGC AGTG GCTC TTTTTTTCAAAGGGG TERM 234 226487 - 226498 + G 70 -5.8 -4.19704 | opp_overlap 226486 TCTTTTTTTCAAAGG GGAG GTCG CTCC TTTTAACTAAGATTG TP0221 226177 - 226959 + | D,D-carboxypeptidase, putative TP0222 226969 - 227415 + | hypothetical protein TERM 235 227821 - 227849 + G 70 -6.6 -4.04206 | gap 1, overlap 227821 CCGACTGCAGGTATT C-CTGCGCTCCGC GAGC GCTGGGCGCGGCG TTTGTGTGCGCGTGA TERM 236 228096 - 228111 + G 74 -3.2 -4.98672 | overlap 228094 AGCAGTGCGTTGTGC GGCAAC GCCG GTTCCC TTTTCTCTTTTTCGA TP0223 227683 - 228990 + | hypothetical protein TP0224 229027 - 229131 + | hypothetical protein TP0225 229177 - 229917 + | leucine-rich repeat-containing protein TERM 237 231686 - 231714 + T 100 -9.6 -4.93296 | gap 1, overlap 231687 231689 GGCATGGTGCCGTGT TC-GCCGTGTGGC GGAA GCCACACGGTAGG TTTTTCTGCTCCTGC TERM 238 231687 - 231713 + T 74 -10.9 -3.55254 | gap 1, overlap 231686 231689 GCATGGTGCCGTGTT C-GCCGTGTGGC GGAA GCCACACGGTAG GTTTTTCTGCTCCTG TERM 239 231689 - 231710 + T 87 -15.9 -2.89738 | overlap 231687 231686 ATGGTGCCGTGTTCG CCGTGTGGC GGAA GCCACACGG TAGGTTTTTCTGCTC TERM 240 232493 - 232481 - T 71 -6.2 -4.34993 | GAAAGATGAAAAGAA CCCC GGTGA GGGG AGTGAAATAGAACCT TP0226 235755 - 235069 - | hypothetical protein TERM 241 235442 - 235429 - G 90 -6.7 -5.16841 | opp_overlap 235429, overlap 235432 GCACAGCAATAAAAA TAGGC GGAT GCCTA TGTGGTATCCTGCAT TP0227 236575 - 235808 - | cobalt ABC transporter, ATP-binding protein TP0228 237457 - 236642 - | biotin synthase, putative TERM 242 237002 - 236986 - GH 73 -5 -4.59773 | overlap 236988 CCGTAGGGGCAAAAA GCGCGG TGTAT CCGCCC CGACCTCCTGAAAAA TERM 243 237478 - 237492 + GH 73 -11.4 -2.79133 | opp_overlap 237477 237474, overlap 237486 GGACAGAGAGAGTAT CGCACG CTT CGTGCG TGTGGTGCGCGATTG TP0229 237401 - 238234 + | DNA polymerase TERM 244 238669 - 238690 + G 80 -5.7 -4.96848 | overlap 238671 CGATTGATGCGATTA CCGCGAGCA CCGG TGCGCGCAG TTTTTATGTGCACGG TERM 245 239732 - 239746 + G 75 -7 -4.30416 | overlap 239734 CACGCCAGACTTTCG CGCCGC CGA GCGGAG TTTTGCCTTGATGAT TERM 246 239893 - 239911 + G 74 -8.1 -4.13343 | overlap 239896 ATGCGCAAGAACTTG CGCAGCG GGAGG CGCTGTG TTTTCCGCCCTTTGT TERM 247 239982 - 240000 + G 70 -6.7 -4.07568 | opp_overlap 239959 239957 239979 239978 239976, overlap 239981 AAGGCTAAAGACGCC GCGTATG CGGCA CATGCGC TTTTGACGGCGCAGA TERM 248 240095 - 240140 + G 72 -4.5 -4.69027 | gap 1 TCGGATGCAAATACT GCTGCGTGCCCCATCATTC-CC AGT GGTGCAGCAGGTGGCGCGCAGC TTTTTAGATGAATTT TP0230 238239 - 240212 + | primosomal protein N (priA) TP0231 240313 - 240963 + | hypothetical protein TP0232 241063 - 241179 + | hypothetical protein TERM 249 241527 - 241538 + G 71 -2.2 -4.98758 | GGTGTATGAGGTTTT CCAG TTAC TTGG TTTTTCTCAGTTTTT TERM 250 241623 - 241638 + G 84 -7.6 -4.63932 | ACCGCTGAAGGTGGA CACCTT TCCG AAGGTG TTTTCTTGCCCGATC TP0233 241210 - 241755 + | anti-sigma F factor antagonist, putative TERM 251 241755 - 241765 + F 71 -4.6 -4.55295 | overlap 241740 CGTGTCTCTCGGTTA GGTG ACG CGCC TTTCTTTCTGGGGCA rpmG 241990 - 242160 + | 50S ribosomal protein L33 secE 242310 - 242489 + | preprotein translocase subunit SecE TERM 252 242630 - 242620 - g 74 -3.2 -4.96848 | TCTTTGATATAAAAA TCCC TGA GGAA CTGCTTACCGAGGTG TERM 253 242761 - 242773 + G 79 -2.6 -5.2166 | overlap 242753 242752 AGGTGCGCAGGATTC CTGG TGTTT CCGG TTTTTTGGGTTCTTC TP0236 242499 - 243056 + | transcription antitermination protein (nusG) TERM 254 243236 - 243219 - g 72 -10.5 -3.05384 | GTGTCCTGCAGGCAA GGCGACG CCCG CGCCGCC GGTTGGGCCTGCGCT rplK 243163 - 243603 + | 50S ribosomal protein L11 TERM 255 243760 - 243790 + G 77 -8.3 -4.07687 | gap 1, opp_overlap 243760 TTAAGAAGAATCAGA CGGTGAGGGA-TAC GGTT GTGCTCCCCCACCG TTTTCGGGCCGAGGT rplA 243600 - 244280 + | 50S ribosomal protein L1 rplJ 244282 - 244824 + | 50S ribosomal protein L10 TERM 256 245313 - 245283 - g 70 -6.9 -4.00843 | opp_overlap 245282 245283, overlap 245284 GGCAAAGATAAAAGA GTCAATGACCGCA GCGGG TGCGCTCATTGAG ATTTCCTAGTGTCTG rplL 244933 - 245322 + | 50S ribosomal protein L7/L12 TERM 257 245319 - 245329 + F 95 -3.2 -5.81412 | GCTCATTGAGATTTC CTAG TGT CTGG TTTTTTTTGCATGCG rpoB 245585 - 249121 + | DNA-directed RNA polymerase subunit beta TERM 258 249588 - 249574 - g 72 -4.3 -4.64763 | CGATTTAAAAAAGAA TCAGT TGCTC ACTGA AACTGAGTACAATGA TERM 259 249643 - 249665 + G 70 -6.9 -4.08692 | CTTTACGGCGGGAAT GGGAGCGGA GGCTA TCCGTACCC TTTTGCAAAACCTTG TERM 260 250608 - 250626 + G 78 -7.4 -4.31164 | CGATTGTGTATCCAT CTCAGGAC ATG GTTCTGGG TTTGTATTATCTGAC TERM 261 251148 - 251136 - g 76 -7.7 -4.17048 | opp_overlap 251136 TGTGGTCTAAAACAA GTGAG GAG CTCAC TTCGCTCATGATGGA TERM 262 251333 - 251347 + G 100 -7.2 -5.72622 | AATTTTAAAGAGGGA CTCAAT GTC ATTGAG TTTTTTATTTCTACC TERM 263 251962 - 251975 + G 74 -8.1 -4.13561 | CTCTCAGCTGTTCAC GCGTC GGGG GACGC TCTTTTTTCACAAAA TERM 264 252001 - 251991 - g 70 -5.4 -4.36914 | TCTTTTTTCACAAAA CTCT GGC AGAG TATCAGCTTCAAGAG TP0242 249134 - 253384 + | DNA-directed RNA polymerase subunit beta' rpsL 253487 - 253861 + | 30S ribosomal protein S12 TP0244 253883 - 254353 + | 30S ribosomal protein S7 TERM 265 254740 - 254757 + G 77 -9.9 -3.5774 | overlap 254729 254730 CTGTGCAGTGCAGAT TGCCTGT TGTT ACAGGCA TTTACGCACTTCCAT TERM 266 256812 - 256827 + G 87 -4.7 -5.22039 | CTGTGGAGATGAGTG CACGT ACAGTG ACGTG TTTTTTGAATTTGGA TP0245 254377 - 257832 + | hypothetical protein TERM 267 257848 - 257868 + F 100 -8.3 -5.78622 | overlap 257849 ATGTGATGCGAAGCG TGCGCAAGA GAA TTTTGCGCG TTTTTTTTCCGCTGA TERM 268 257849 - 257867 + F 80 -9.6 -4.06089 | overlap 257848 TGTGATGCGAAGCGT GCGCAAGA GAA TTTTGCGC GTTTTTTTTCCGCTG TERM 269 257990 - 258001 + G 74 -5.8 -4.56597 | GGGATGGTAGGGGTT CCAC TGCA GTGG TTTTTAAAGGACGAC TERM 270 259637 - 259605 - g 72 -7 -4.16016 | TGAGTCCGGAAGAAA CCGCGCTTTTCCAT GATGT ATGGAATAGCACTG AGGAGTTAGGACTAT TP0246 257978 - 259771 + | hypothetical protein TP0247 259822 - 260895 + | N-acetylmuramoyl-L-alanine amidase (amiA) TERM 271 261156 - 261182 + G 76 -3.6 -4.91109 | overlap 261160 261160 261161 261163 TTACGCACGGTTGGT GGATCCAGCGGT GAG ACCGCTGAGTTG TTTTTCTCGTGGCGA TERM 272 261160 - 261179 + G 85 -8.6 -4.56153 | gap 1, overlap 261156 261160 261161 261163 GCACGGTTGGTGGAT C-CAGCGGT GAG ACCGCTGAG TTGTTTTTCTCGTGG TERM 273 261161 - 261177 + G 76 -12.3 -2.5848 | overlap 261160 261160 261156 261163 CACGGTTGGTGGATC CAGCGGT GAG ACCGCTG AGTTGTTTTTCTCGT TP0248 260962 - 261366 + | hypothetical protein TP0249 261445 - 262497 + | flagellar filament outer layer protein (flaA-1) TP0250 262548 - 262775 + | hypothetical protein rpsT 262610 - 262897 + | 30S ribosomal protein S20 TP0251 262929 - 263246 + | DNA-binding protein II TERM 274 264069 - 264080 + G 81 -7.2 -4.71828 | TGATTTGGTGGTGTG GCCG GAGA CGGC TTTTGTTCCTCGCAT TP0252 263236 - 264876 + | apolipoprotein N-acyltransferase, putative TERM 275 265038 - 265053 + G 75 -5.4 -4.64423 | GCGGTGTGTGCAGTT CAGTAC GCGC GTGCTG TTTCTATTTTTGTTG TP0253 264867 - 265280 + | hypothetical protein TERM 276 266117 - 266139 + G 93 -9.9 -4.44448 | gap 1 ATCTATGGGCAGATT CGCTC-CCCT AAGG AGGGAGAGCG TTTCTTTGCAATGCT rho 265517 - 267076 + | transcription termination factor Rho rpmE 267195 - 267398 + | 50S ribosomal protein L31 TP0256 267443 - 268093 + | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (pgsA) glpQ 268190 - 269260 + | glycerophosphodiester phosphodiesterase TP0258 270036 - 269326 - | hypothetical protein TERM 277 269387 - 269353 - G 89 -14.3 -3.15544 | gap 1, opp_overlap 269374 269382 269384 269385 GTTCATCTCCATGAA GCGAGCACGCACCGCC TCGA GAC-GTGCGAGCTCGC GCGATATGGTACGCG TERM 278 270704 - 270692 - g 80 -5.5 -5.01732 | overlap 270693 270701 AACTCGGGGAAAAAA TCGGC AAG ACCGA TCCTCGGGACATGCC TP0259 270115 - 270726 + | hypothetical protein TP0260 272203 - 270857 - | hypothetical protein TERM 279 271253 - 271243 - G 77 -8.2 -4.08394 | opp_overlap 271243 271245, overlap 271244 AGACGTGTTCCAAAA GCGC ACT GCGC CGCAGCTGCTCTTCT TERM 280 271445 - 271483 + g 87 -4.4 -5.24129 | ACGGGAGTAGGGAAA GGCGTAGTGCGCATCGGG CAA TTCAATGCGTGCGAGGCC TTTTTTCTCACCGAC TERM 281 271700 - 271689 - G 81 -5.8 -4.84761 | opp_overlap 271696 AGACCGTGAGAAAAA CACC ATCC GGTG GTACCGTCTTCGGTC TERM 282 271904 - 271930 + g 100 -13.1 -4.59342 | gap 1 GTAACGGTACTCGCG GAGGCGC-TCAG CGTA CTGAAGCGCCTC TTTCTTTGTCCTGCA TERM 283 272316 - 272330 + H 80 -5.6 -4.89852 | opp_overlap 272316, overlap 272317 TCTATCGAAAATGTA CCGTGG GAG CCACGC TTTTTCTCGGTGTCG TP0261 272318 - 273361 + | catabolite gene activator, putative TP0262 273339 - 274013 + | catabolite gene activator (Crp) TERM 284 275670 - 275688 + G 100 -4.6 -5.47399 | overlap 275672 ATACGGTGCGGGGAC TGCAGAAC GGC GTTTTGTA TTTTTTTGCGCTTGC TP0263 274028 - 275812 + | hypothetical protein TERM 285 276231 - 276265 + G 72 -5.8 -4.3739 | gap 1, overlap 276227 276233 GAGATGCACATCGCG TTTGCGTGTTCCTGT GTGGAG GCAGGA-CACGCGGA TTTTATCAAAACATC TERM 286 276382 - 276400 + G 78 -8.1 -4.4017 | gap 1 CAGGCGGCATCCGTA CGC-GCGC GCAG GCGCAGCG TTTTATCGAGCTTGG TP0264 275817 - 276473 + | deoxyribose-phosphate aldolase (deoC) TP0265 278272 - 276905 - | amino acid ABC transporter, permease protein (braC) TP0266 278323 - 278448 + | hypothetical protein TERM 287 280120 - 280148 + F 100 -9.6 -4.93296 | gap 1, overlap 280121 280123 GGCATGGTGCCGTGT TC-GCCGTGTGGC GGAA GCCACACGGTAGG TTTTTCTGCTCCTGC TERM 288 280121 - 280147 + F 74 -10.9 -3.55254 | gap 1, overlap 280120 280123 GCATGGTGCCGTGTT C-GCCGTGTGGC GGAA GCCACACGGTAG GTTTTTCTGCTCCTG TERM 289 280123 - 280144 + F 87 -15.9 -2.89738 | overlap 280121 280120 ATGGTGCCGTGTTCG CCGTGTGGC GGAA GCCACACGG TAGGTTTTTCTGCTC TERM 290 280937 - 280925 - f 71 -6.2 -4.34993 | GAAAGATGAAAAGAA CCCC GGTGA GGGG AGTGAAATAGAACCT TP0267 283557 - 283922 + | hypothetical protein TERM 291 284307 - 284323 + G 78 -10.8 -3.45788 | opp_overlap 284306, overlap 284305 GTGCCCCGAATGGAG CGCGGC AGACC GCCGCG TATTATCTTATGGGG TP0268 283919 - 284572 + | hypothetical protein TERM 292 284694 - 284708 + G 77 -10 -3.65656 | GCCGTGGCAATACCT CCACTG CCC CAGTGG TTCTGTGTGTGATCA TERM 293 284768 - 284758 - g 81 -8.2 -4.36931 | opp_overlap 284758 284755 TAAGGCAGAGCAAAA GGCG CGG CGCC TCGTTCGTCTCCTGT TP0269 284582 - 286030 + | hypothetical protein TP0270 286104 - 287540 + | polynucleotide adenylyltransferase (pcnA) TP0271 288511 - 287537 - | chromosome partitioning protein (parB) TP0272 289259 - 288498 - | SpoOJ regulator (soj) TERM 294 289886 - 289896 + G 70 -6.8 -4.13561 | CCAATGCGTATATCT CTCG GCA CGAG TATTTTTTGAGCACC TERM 295 290016 - 290038 + G 72 -6.2 -4.3129 | overlap 290008 ATTGTGCTTCTGTGG CAGGATGTGC TGC GCACGCTCTG TTTTCGTCGTGCATG TP0273 289392 - 290183 + | hypothetical protein TP0274 290721 - 290221 - | deoxycytidylate deaminase, putative TP0275 291559 - 290810 - | UDP-N-acetyl-D-mannosamine transferase, putative TERM 296 291332 - 291320 - G 72 -4.7 -4.66833 | overlap 291321 291322 CGGCAATCCCAAAAA GCGTG CAC CGCGC ACAATACTGTAGGAT TP0276 292422 - 291538 - | hypothetical protein TERM 297 291731 - 291763 + g 79 -9.9 -3.74077 | gap 1, opp_overlap 291726 GCAAGTATAACCGCC TGCGCGCGCACATC CGGCGT GTTGTGCG-GCGCA TTTGGCTCTGTGGGC TP0277 293941 - 292595 - | carboxyl-terminal protease (CTP) TP0278 294069 - 294197 + | hypothetical protein TERM 298 294644 - 294657 + G 78 -8.1 -4.35483 | TTGGGTTTCGTTTGC GCGCA CAGT TGCGC TTTCTTATCGTGCGG TERM 299 296526 - 296536 + G 72 -6.8 -4.28651 | overlap 296506 GAGGGGGAAGTATCT TCCG TGA CGGA TTTTGGGATTTTCGT TP0279 294243 - 296834 + | bifunctional cytidylate kinase/ribosomal protein S1 TP0280 296831 - 296959 + | hypothetical protein TP0281 296976 - 297104 + | hypothetical protein TERM 300 297272 - 297260 - g 74 -10.5 -3.14468 | CTTCAGCAGAGGTAA CGCGC ATA GCGCG TGAGTGGGACGTATT TERM 301 297447 - 297457 + G 78 -5.4 -4.87803 | GTACGCACAGGCCTG TGTC GCG GACA TTTTCTTTGCGCGTA TP0282 297097 - 297816 + | hypothetical protein TERM 302 297835 - 297849 + F 77 -11.4 -3.51924 | opp_overlap 297826 297825 GAGAAGCGTTCGCGC CGTGCG GTG CGCACG TTGTGTAGCTAGGAA TERM 303 298319 - 298333 + G 85 -2.8 -5.40072 | ATCGTGCGCTCGACG CTGGTT TAG AAACAG TTTTTTTGGCGGCAA TP0283 297994 - 298473 + | lipopolysaccharide core biosynthesis protein (kdtB) TERM 304 298841 - 298855 + GF 70 -5.6 -4.4009 | overlap 298837 GGATGCGGCGAGCGC CGCGAA GGT TGCGCG TTTTATGCAGTGCGC TERM 305 299003 - 299018 + GF 71 -6 -4.28111 | overlap 299002 GGCTGTCTTTGTTCT GCGCGC AGAC GCGCCC TTTATTGATAGTGTG TP0284 298578 - 299237 + | hypothetical protein TERM 306 299696 - 299724 + GF 83 -9.6 -4.19953 | gap 1, overlap 299696 299700 GTGCGTGATTTGTGC GAATGTGCGCGCA ACAG TGCGCGCAC-TCC TTTTGCCATTGGCTG TERM 307 299700 - 299721 + GF 95 -15.9 -3.11289 | overlap 299696 299696 GTGATTTGTGCGAAT GTGCGCGCA ACAG TGCGCGCAC TCCTTTTGCCATTGG TERM 308 299931 - 299905 - gf 70 -4.5 -4.45544 | gap 1, overlap 299906 299912 CCGTATGAATGAAAA CGA-AAAAGAGC TCGA GCCCTTTTACCG CACGTGGAAGGAGCG TERM 309 299923 - 299912 - gf 79 -3.6 -5.13016 | overlap 299906 299905 AATGAAAACGAAAAA GAGC TCGA GCCC TTTTACCGCACGTGG TP0285 299177 - 300256 + | hypothetical protein TP0286 300228 - 300593 + | hypothetical protein TP0287 300560 - 301183 + | hypothetical protein TERM 310 301490 - 301508 + G 100 -7.4 -5.63517 | TTCGAACCGTCGTGC GGGTTACC GGA GATAACCC TTTTTTGTTTCACGA TP0288 301183 - 302130 + | spore coat polysaccharide biosynthesis protein (spsF) TERM 311 302314 - 302335 + G 88 -5.2 -5.22312 | gap 1, opp_overlap 302308 GAGAAAGGAGCAGGA TCTGCCTGT GGCAA AC-GGCAGA TTTTTTCCTATACCT TERM 312 303475 - 303491 + G 100 -2.2 -5.75342 | overlap 303477 TGCAGGTGTCACTGG TATGCG TTTTC CGCATC TTTTTTTTGCGCAGA TERM 313 303477 - 303489 + G 70 -4.8 -4.52949 | overlap 303475 CAGGTGTCACTGGTA TGCG TTTTC CGCA TCTTTTTTTTGCGCA TERM 314 303568 - 303553 - g 74 -2.5 -5.0538 | GCGCACGGTAAAAAA GCAGC TCTTGC GCTAC GGTTTTACGGTAAAG TP0289 302153 - 303757 + | hypothetical protein TERM 315 304578 - 304568 - g 100 -3.2 -5.65513 | overlap 304571 GAGGAAGCAAAAAAA CACG CAA CGTA TATTGCCGAATCTAA TP0290 303812 - 304645 + | hypothetical protein TERM 316 305217 - 305237 + G 70 -4.7 -4.56597 | opp_overlap 305217 GACGTTTTGCAAAAC TTCCTATCG TGG TGAAAGGAA TTTTTGCGCCGCGCG TP0291 304682 - 305563 + | hypothetical protein TP0292 305554 - 306807 + | outer membrane protein (tpn50) TP0293 306819 - 306995 + | hypothetical protein TERM 317 308118 - 308137 + G 74 -10.6 -3.23395 | overlap 308119 TGTGTCAGGGTTGTT CGCGCGCG TCAT CGCGCGCA TTCATCATAATCAAT TERM 318 308119 - 308136 + G 84 -14.1 -2.53715 | overlap 308118 GTGTCAGGGTTGTTC GCGCGCG TCAT CGCGCGC ATTCATCATAATCAA TP0294 306973 - 308238 + | phosphoribosylpyrophosphate synthetase TERM 319 308542 - 308554 + G 72 -4.7 -4.72373 | opp_overlap 308528 GCGGGGGCGTCTGAT CCCCG GTG CGGTG TTTCTCTTTTTTTGC TERM 320 308588 - 308600 + G 73 -4.1 -4.84359 | AGGTTTTGCTCCTTT TGCAG CGA TTGCA TTTTTGTGCGCGTGA TP0295 308257 - 309501 + | carhohydrate kinase (xylB) TERM 321 309579 - 309595 + F 79 -7.9 -4.41206 | GTGTTTGACGTTACG CTCTCGC TGT GCGCGAG TTTTGTCCACTAATT TERM 322 309754 - 309773 + GF 74 -8.5 -3.90588 | AGAGCGGTTTCAAGT GGCTGCG GCTGCG CGCGGCC TTTCGTTACGGCGTA TERM 323 310068 - 310098 + GF 70 -6.8 -4.08706 | overlap 310069 GAGTATCTTTTACTC ACCTTTTACGCAGG TTT TCTGCGCAGAAGGG TTTCTATGCTCAAAG TP0296 309587 - 310222 + | hypothetical protein TP0297 310186 - 310998 + | hypothetical protein TERM 324 311858 - 311873 + G 93 -6 -5.22289 | overlap 311848 311846 AGGGAGTACTTGCGG CCGCGC GGGA GCTCGG TTTTTATGTTTCGTG TP0298 311131 - 312162 + | exported protein (tpn38b) TERM 325 312347 - 312386 + G 72 -6.4 -4.42765 | gap 1, overlap 312350 TTCGGGCGCGCGTGA GACGGACG-CGCTGAGCAC AGC GTGCTCAGCGATGTGAATC TTTCCTTTTTTACCG TP0299 312159 - 312383 + | hypothetical protein TERM 326 312729 - 312754 + G 82 -2.5 -5.42131 | overlap 312730 312731 AGAAGGAAGAATACG TTGCATGTTTG AGTG CAGACAAGCGG TTTTTTGTATCGTTG TERM 327 312827 - 312845 + G 87 -4.5 -5.20781 | gap 1, overlap 312814 GAGCCGCGGTGTGCT CCG-GCGC AATC GCGTGCGG TTTTCTTTTCTCATC TP0300 312368 - 313918 + | ribose/galactose ABC transporter, ATP-binding protein (rbsA-1) TERM 328 314498 - 314513 + G 100 -3.2 -5.86061 | ATGCGTCCTTAGTAG CACTCG CAGT TGGGTG TTTTTTTTCGTACAC TERM 329 314684 - 314696 + G 74 -3.3 -4.9725 | TTGGGCTGTTTGGCA CCTGC TAT GTGGG TTTTTCTGTGGGGAT TP0301 313915 - 315048 + | hypothetical protein TP0302 315039 - 315980 + | hypothetical protein TP0303 317913 - 315967 - | DNA mismatch repair protein (mutL) TERM 330 316064 - 316085 + g 72 -10.9 -3.09516 | opp_overlap 316062 316061 GGTAATGCAAAAGCC TGCTCCACT AACG AGTGGAGCG TTGCGTCATCCAGGA TERM 331 316149 - 316168 + g 77 -3.4 -5.1675 | overlap 316150 AGGTAGCGAGGACGT GGCGCAGG ATGT CGTGCGCG TTTTTTCCTGAGTAG TERM 332 317049 - 317028 - G 73 -3.6 -4.7629 | overlap 317020 317030 TGACGAAGGTAAAAA TACCGCGG CGTTCT CTGCGGCA GATGGCGGGTTCTGA TERM 333 317420 - 317436 + g 77 -12.3 -2.81272 | overlap 317419 ACCGGCGGTACGTGC GCTGCAG TGC CTGCAGC CTTTGGCTGGTAGTG TERM 334 317759 - 317771 + g 85 -3.3 -5.42862 | overlap 317745 GGCCGCTCGATGACT TCTCC TGC GGCGA TTTTTTTAGCGGTGT TERM 335 317848 - 317837 - G 71 -2.2 -4.99035 | TCATGCATAGAAAAA CCCT TGCC AGAG CGTAGACAGCCAGCT TP0304 321045 - 317926 - | hypothetical protein TERM 336 318888 - 318875 - GH 79 -4.5 -4.96848 | overlap 318877 TTGCCCACATAAAAA GAGCT TTTC AGCCC CAGCGAGGTAAAAAA TERM 337 320967 - 320982 + gH 79 -4.6 -4.89838 | ACACGCTACACTCGT GCCGTA TGGA TCCGGC TTTTATCTTTATTAC TERM 338 321358 - 321343 - gH 73 -11.8 -2.68279 | overlap 321340 TACGGATGAAATCCA GGCGCG AATT CGCGCC GCTGCTGCTACCACG TERM 339 322610 - 322621 + GH 75 -4.4 -4.77165 | TTTTTCGGCGTGCAG TTCC ACCC GGAA TTTTGTTCTCGACCG TP0305 320972 - 322705 + | CTP synthetase rpsD 322870 - 323484 + | 30S ribosomal protein S4 TP0307 323571 - 324599 + | hypothetical protein TERM 340 324977 - 324993 + G 79 -4.3 -4.98531 | overlap 324956 CGTTTGCCGTAACGG CTCGGCG CCG CACTGAG TTTTTACTTTCCGAG TP0308 324574 - 325539 + | amino acid ABC transporter, periplasmic binding protein (hisJ) TERM 341 325549 - 325574 + F 100 -5.4 -5.51402 | gap 1, opp_overlap 325541 325552, overlap 325552 GAATAAAGGTGCAAG GCAGCGGTGCG TTTTT TGCACTGC-GC TTTTTTTGCGTGTGT TERM 342 326227 - 326242 + GF 73 -11.8 -2.72109 | overlap 326226 CGCTCTGCGCAGTGA CGCCGC ACCT GCGGCG CTTGTATCGAATTTT TERM 343 326338 - 326362 + GF 74 -6.3 -4.52857 | ACATGGTTGTGCGCA CTCTGTCGCAG CTG CAGCGAGAGGG TTTTGTGTCAGCGCT TP0309 325605 - 326423 + | amino acid ABC transporter, periplasmic binding protein TERM 344 326499 - 326529 + GTF 77 -7.5 -4.27316 | gap 1, overlap 326498 326501 CGTTCCATCTGCTTC CGCGCGCGT-GCCG GAGG CGGCCGTGTGTGCG TTTTGCATTCAAACG TP0310 326392 - 326775 + | hypothetical protein TP0311 326897 - 326754 - | hypothetical protein TERM 345 327090 - 327108 + GH 80 -11.7 -3.2964 | overlap 327083 GGGGATAGGGGTGTG CGCACGC TTTAT GCGTGCG TTGTACGAAGCATTT TP0312 326881 - 327894 + | hypothetical protein TERM 346 328913 - 328924 + G 70 -4.4 -4.57073 | AGCGTGCACAGGAGG TTGC ACTG GCAA TTTTTACGCACGCTG TP0313 327985 - 330273 + | TPR protein E (tprE) TP0314 330476 - 330330 - | hypothetical protein TP0315 331146 - 330499 - | hypothetical protein TERM 347 330842 - 330871 + g 86 -14.3 -2.93857 | gap 1, opp_overlap 330841, overlap 330838 330869 TCCAGCCCCACCAAC GGTGTCTCCGGCGC ATA GCG-CGGAGGCGCC TGGTTCTCTGTATCT TERM 348 332079 - 332117 + r 81 -13.2 -3.00525 | gap 1, overlap 332073 TCAGCTGCAGCTGTG CCCACACCC-CTGAGCG TGCCTC CCCTCGGCGGGTGTGGG TGTGCTTTGACACCA TP0317 334663 - 332393 - | TPR protein G (tprG) TERM 349 333690 - 333700 + gr 85 -6.8 -4.84529 | GCATATTCGTCCAGC CAGG CTT CCTG TTTTTGACTTTCTCC TERM 350 333734 - 333761 + gr 71 -11.2 -2.94938 | overlap 333736 333755 GAAGAGGTTATTTGA GAGGGCGGTGAG TTCA CTCTGCGCCCTC TGTGTGCGATTTTGA TP0318 334794 - 334615 - | hypothetical protein TERM 351 334841 - 334856 + G 83 -6 -5.02074 | AGAGAGAAGTGGGTA CGCGCG TTTG CGGGCG TTTTTTGCGCCATGC TP0319 334823 - 335884 + | membrane lipoprotein (tmpC) TERM 352 335880 - 335937 + F 90 -4.8 -5.38054 | opp_overlap 335885, overlap 335888 335891 335895 CTGCACGCATGATGA AC-TAAGGGGGAGAGGTGCCTCCCGTGC CTGC GCGCGGGAGGC-CTTCTTCTTCATCTGA TTTTTGTTTGTACGG TERM 353 335888 - 335928 + F 100 -18.4 -3.39138 | gap 1, opp_overlap 335885, overlap 335880 335891 335895 ATGATGAACTAAGGG GGAGAGGTGCCTCCCGTGC CTGC GCGCGGGAGGC-CTTCTTC TTCATCTGATTTTTG TERM 354 335891 - 335925 + F 100 -16.5 -3.80452 | gap 1, opp_overlap 335885, overlap 335888 335880 335895 ATGAACTAAGGGGGA GAGGTGCCTCCCGTGC CTGC GCGCGGGAGGC-CTTC TTCTTCATCTGATTT TERM 355 335895 - 335922 + G 100 -14.8 -4.0156 | opp_overlap 335885, overlap 335891 335888 335880 ACTAAGGGGGAGAGG TGCCTCCCGTGC CTGC GCGCGGGAGGCC TTCTTCTTCATCTGA TP0320 335894 - 336049 + | hypothetical protein TERM 356 337533 - 337549 + GF 71 -5.7 -4.31085 | CCGAACGTAATCGGG GGGGTGC AGT GCTCCTC TTTTCCCTTGATATG TP0321 336125 - 337726 + | ribose/galactose ABC transporter, ATP-binding protein (rbsA-2) TP0322 337636 - 338838 + | ribose/galactose ABC transporter, permease protein (rbsC-1) TP0323 338835 - 339785 + | ribose/galactose ABC transporter, permease protein (rbsC-2) TERM 357 340377 - 340405 + G 81 -9.6 -4.03234 | gap 1, opp_overlap 340350 340351 TAACACTGCAGTTAC GGTGCGCAGCG ATTCCAGA CGC-GCGCACC TTTCTGTGCCGCAGG TERM 358 341299 - 341312 + G 70 -5.9 -4.15044 | TACCTTGCCGCGAAT GCGGG CAGT CTCGC TTTCTTGAGGCACAC TP0324 339889 - 341346 + | hypothetical protein TERM 359 342462 - 342494 + G 74 -9.8 -3.53012 | GTGCCGGGTCAGGCG CGTGCGTGGGTGCG CACCA CGTACTCAGGCGCG TTTGAAGGGCAGCCG TERM 360 343508 - 343526 + G 81 -6.6 -4.66537 | overlap 343509 GTTTGAGTTCATAGC CGATCCGG TTT CCGGGTCA TTTTATGTTCGCGGG TERM 361 343509 - 343525 + G 72 -10.1 -3.3944 | overlap 343508 TTTGAGTTCATAGCC GATCCGG TTT CCGGGTC ATTTTATGTTCGCGG TP0325 341328 - 344294 + | hypothetical protein TERM 362 344458 - 344477 + G 82 -3.4 -5.28176 | GCTCGAATATATTGC TCGCGGCC AGTT GGACACGA TTTTTTCTCAATACA TERM 363 344549 - 344539 - g 72 -6.8 -4.18401 | opp_overlap 344532 344539 GGAGATACTGCAAAA GGTC TAT GACC TTGAGTACTTTTCTG TERM 364 344947 - 344961 + G 74 -2.7 -5.02074 | overlap 344939 CAAGAAGGTGCTTTC CACGC AGGAG GCGCG TTTTTTGACCAGTGG TERM 365 345232 - 345253 + G 78 -10.9 -3.5394 | overlap 345251 TAGGCTCAAGCGCGG GGCCATCAT GAAT ATGGTGGCC TTTGAGCAGGGCTTT TERM 366 346191 - 346201 + G 77 -6.8 -4.56597 | overlap 346157 TTGCGTACGACCCGT CCAG CGG CTGG TTTTTAGGACAGCGC TP0326 344276 - 346837 + | outer membrane protein TERM 367 347017 - 347033 + G 72 -10.1 -3.39327 | ACCTTTTGGCGCGAT TCGCGCG TCC TGCGCGA TTATGAATCTAAAAA TERM 368 347218 - 347207 - g 70 -5.8 -4.15565 | TGGAGTATTCTAAAA CGTC CAAC GACG AGCTCACCGCGCTGC TP0327 346894 - 347412 + | cationic outer membrane protein (ompH) TERM 369 348066 - 348077 + G 81 -7.2 -4.72272 | TCGTTCGTACCACCG GCGC AGAT GCGC TTTTTAATCCCGAGC TERM 370 349259 - 349273 + G 90 -11.4 -3.87075 | GTGGTGGAACTTCAT CTCCCC TCC GGGGAG TTTGTACCCAATGAT TP0328 347468 - 350170 + | DNA mismatch repair protein TERM 371 351168 - 351153 - g 72 -4.6 -4.62984 | opp_overlap 351153 351157 351163, overlap 351146 GTACCACACACAAAA CGTTGC GCGG GCCACG CGGTGCCTTTATTTT TERM 372 351163 - 351175 + G 71 -3.3 -4.83243 | opp_overlap 351153, overlap 351157 351153 CAAAACGTTGCGCGG GCCAC GCG GTGCC TTTATTTTGTGTAAA TERM 373 351616 - 351599 - g 79 -9.8 -3.78172 | overlap 351594 GAAATGAAAAGAATA GCGCGC CTGATC GCGCGC GTGCTCGGCGCTGCA TERM 374 351965 - 351985 + G 70 -4.6 -4.53475 | overlap 351966 TTGCGTGAGGCCCCG TGTCTCCC ATTGA GGGAGCCG TTATTTTTCTCCCAT TP0329 350288 - 352012 + | serine hydroxymethyltransferase TP0330 353782 - 351986 - | cell division protein, putative TP0331 355478 - 354012 - | 6-phosphogluconate dehydrogenase TERM 375 354595 - 354575 - G 76 -3.9 -4.93365 | opp_overlap 354575 CGGGAGAACCAAAAA CGCGATG TGCCTTG CAGCGCG CTTGCTTTTGCGCAG TP0332 355494 - 355619 + | hypothetical protein TP0333 355657 - 356349 + | hypothetical protein TERM 376 356693 - 356741 + G 82 -7.9 -4.54449 | overlap 356694 356739 TTGCCTGTGTGCTCT TCCTGGGTGGGGTGCTGGGTGTG TAT TACGCGCGGCACCGCGCGCTGGG TTTTCTATCCCGTAT TP0334 356374 - 357591 + | hypothetical protein TP0335 358130 - 357588 - | hypothetical protein TERM 377 357663 - 357673 + gF 95 -8.2 -4.92669 | overlap 357615 357666 TGCGCTTGCGCGCGC GCGG GAG CCGC TTCTTTTTTTCTCTC TERM 378 357666 - 357676 + gF 100 -3.2 -5.80248 | overlap 357615 357663 GCTTGCGCGCGCGCG GGAG CCG CTTC TTTTTTTCTCTCTTA TERM 379 357754 - 357698 - Gf 81 -6.5 -4.82901 | gap 3, overlap 357701 357732 TCTCTCTTACAAAAA GTACCCGTAGCGCTGCGCC-CGCAGCTC CTGC AAACAGCGTGGCGCTGC-CTGCGGGC-C GGTGTGCAAGAGCAA TERM 380 357752 - 357701 - Gf 80 -11.5 -3.31915 | overlap 357698 357732 CTCTTACAAAAAGTA CCCGTAGCGCTGCGCC-CGCAGCTC CTGC AAACAGCGTGGCGCTGC-CTGCGGG CCGGTGTGCAAGAGC TERM 381 357744 - 357732 - Gf 71 -9.1 -3.53811 | overlap 357701 357698 CGCAGCTCCTGCAAA CAGCG TGG CGCTG CCTGCGGGCCGGTGT TERM 382 357940 - 357904 - Gf 100 -10.1 -4.9725 | overlap 357905 AGCCGTACATAAAAA GCTCCCCCTTCCCCTTC TGG GAAGGGAAACGGTGAGG GAAGAGAAAAACAGA TERM 383 357939 - 357905 - Gf 100 -13.6 -3.57627 | overlap 357904 GCCGTACATAAAAAG CTCCCCCTTCCCCTTC TGG GAAGGGAAACGGTGAG GGAAGAGAAAAACAG TERM 384 358239 - 358254 + GH 73 -6.1 -4.38322 | overlap 358236 TGGGTGTTTGTTGGT CCGCA GTGGTG TGCGG TTCTTTTCTCGTTGG TERM 385 358613 - 358641 + GH 72 -11 -3.02511 | gap 1, opp_overlap 358613 ACGCTACCGATATGA CGGAC-GACGCGG ATGC CCGCGTCTGTCAG TATTACGCGCGTGGG TP0336 357973 - 359673 + | comE protein, putative TERM 386 359823 - 359849 + G 72 -7.2 -4.25104 | GTGTATGGGAAATTG GTGCAGGCATTG GTG CGATGACCGCAC TTTTGGTGCAAAACA ksgA 359654 - 360511 + | dimethyladenosine transferase TP0338 360529 - 361017 + | hypothetical protein TERM 387 361118 - 361137 + G 100 -3.6 -6.22802 | overlap 361120 GACGTGTCGGTGTGA TGTGTTCT GCGC AGAACATG TTTTTTTTTGTGCAC TERM 388 361120 - 361135 + G 81 -6.2 -4.76409 | overlap 361118 CGTGTCGGTGTGATG TGTTCT GCGC AGAACA TGTTTTTTTTTGTGC TERM 389 361484 - 361500 + G 76 -10.9 -3.32294 | TCCCGATTTTTTCAG TACCCTG CGT CAGGGTA TTGTGCACCGTTTGG TP0339 361029 - 362024 + | hypothetical protein TP0340 363482 - 362010 - | folylpolyglutamate synthetase (folC) TERM 390 362523 - 362538 + g 81 -4.6 -5.08824 | overlap 362520 362524 ATATTTTGCCGCGCA CGCAGC CAGT GCTGCA TTTTTTGCCTGAACA TERM 391 363018 - 363028 + g 91 -5.4 -5.42862 | CTGGCCGTAGTCGCG CAGA TTC TCTG TTTTTTTCACCGTGT TERM 392 363103 - 363090 - G 90 -4.5 -5.44119 | opp_overlap 363090 GGCAGGTGAAAAAAA CACAC CCGC GCGTG TTATTCTCTCTCTCG TERM 393 363299 - 363313 + g 70 -5.6 -4.37886 | TGTGCAGAGGTGGTG TGCCGC TTG GGGGCA TTTTCTCAAGCGTGC TERM 394 363365 - 363355 - G 70 -4 -4.60041 | ACCCAGGCGTAAAAA TCTT GAA AAGA ATGCACCGGTATATG murC 363501 - 364946 + | UDP-N-acetylmuramate--L-alanine ligase TP0342 365067 - 365627 + | cytidylate kinase TERM 395 366071 - 366082 + G 79 -2.2 -5.27938 | ACAAACATCCGTGCA GTGT TTAT ACGC TTTTTCTTTCCCGAT TP0343 365621 - 366454 + | A/G-specific adenine glycosylase, putative TP0344 369881 - 366459 - | transcription-repair coupling factor (trcF) TERM 396 368709 - 368675 - G 70 -4.3 -4.49756 | gap 1, opp_overlap 368676 368678, overlap 368669 368676 CTGCAAAGACGAAAA CGTGCCA-TCCGTCTT TTGA AAGACGGAGTAGCTCT TCTTTGAAGTAAGGA TERM 397 369573 - 369533 - G 81 -9.5 -4.07885 | opp_overlap 369536, overlap 369537 CACGCTGGGTGAAAA CGAACGCGCATGGCGCGGT TGC ATCGCGCTGTGCGAGTGCG CACAGCGCCTCTACC TERM 398 369549 - 369537 - G 81 -10.5 -3.66908 | opp_overlap 369536, overlap 369533 CTGGGTGAAAACGAA CGCGC ATG GCGCG GTTGCATCGCGCTGT TERM 399 369787 - 369771 - G 74 -3 -5.02074 | gap 1, overlap 369774 GTATTCGCCAAAAAA GTAGGAC CGCA GTCC-AC CGGTGCACCCTTCAA TERM 400 369828 - 369816 - G 73 -9.1 -3.65199 | opp_overlap 369823 AACGCGGTAGGGAAA GCGTG CGG CACGC AGCGAGCGCAGCGCA TP0345 370034 - 371125 + | phospho-N-acetylmuramoyl-pentapeptide-transferase (mraY) TERM 401 371326 - 371346 + GF 71 -3.1 -4.74103 | overlap 371328 AGCGGTGTGTGCGGT GACGGCGTG TGC CGGGCCGTG TTTTTGCGTTCAAGC TP0346 371282 - 371983 + | hypothetical protein TP0348 373925 - 372516 - | hypothetical protein TP0347 371952 - 372782 + | hypothetical protein TERM 402 373514 - 373490 - GT 88 -12.1 -3.64716 | overlap 373488 CCAGCGCGCAAAATA GCGGGAGTACG TAC CACACCCCCGC GCCAAAAACGAGCAC TERM 403 373698 - 373686 - GT 80 -5.5 -4.91357 | AAATACATAAGAAAA GAGCG TCC CACTC ACCAGAGCCTGCCCT TP0349 374425 - 373895 - | peptidyl-prolyl cis-trans isomerase, FKBP-type (slyD) TP0350 374639 - 375925 + | glutamate-5-semialdehyde dehydrogenase (proA) TERM 404 375916 - 375934 + F 72 -3.7 -4.72272 | TGGAGAGGGGCAGGT GCGTCCG TGATC CGTGCGC TTTTTGCTGCGGCAA TERM 405 376001 - 376014 + G 77 -6.7 -4.57837 | CGCAGGCAGATGGTA CTCCT GATG AGGAG TTTTTGGCGGAGTGT TERM 406 376516 - 376528 + G 70 -4.1 -4.67982 | GCGCTGTTGTGGCAG GCAGA TCT TTTGC TTTTGTTGAGTGACA TP0351 375922 - 376812 + | gamma-glutamyl kinase TP0352 376944 - 377201 + | hypothetical protein TP0353 377707 - 377198 - | ribonuclease H (rnhA) TERM 407 377549 - 377575 + g 90 -13.1 -3.43288 | gap 1, overlap 377545 TGTGCTCGGGTAGGC GCTGCCGC-TTC TAGT GAATGCGGCAGC TTCTGGTGCSSTTTG TP0354 377970 - 378596 + | thymidylate kinase (tmk) TP0355 378946 - 378563 - | hypothetical protein TERM 408 378698 - 378686 - G 81 -9.1 -4.07568 | GCGTGCTCGGTAAAA CGGTG CTG CACCG GCGCAGCATAAGCAA TP0356 379151 - 379468 + | RNA-binding protein, putative TERM 409 380123 - 380137 + G 73 -11.4 -2.7674 | overlap 380121 CCTGTGTCATGGCGC CGCCGA GTA TCGGCG TGCTTGAGTCGTGTC TP0357 379570 - 380310 + | biotin--acetyl-CoA-carboxylase ligase (birA) TP0358 381895 - 380315 - | hypothetical protein TERM 410 380542 - 380530 - G 72 -5.5 -4.55287 | opp_overlap 380538 GCGACTGACACAAAA GCACA TCA CGTGC TGCCATGTTCAGTAG TERM 411 380724 - 380705 - G 86 -5.8 -5.1615 | gap 1 TGAAGATCCAAAAAA GGGT-TCAA TGA TTGACACCC CCACTGCGGGGCAGG TERM 412 380955 - 380965 + g 81 -4.6 -5.15167 | opp_overlap 380933, overlap 380946 380929 GCATCAGCGACACAC GTGC GTT GCGC TTTTTCTTGCTCATA TP0359 382542 - 381907 - | hypothetical protein TERM 413 382771 - 382760 - g 70 -5.8 -4.28994 | overlap 382761 TAGGAGGTATGAAAA TGGC TGGT GCCA GCAAAAATTCGCGTA TP0360 382753 - 382929 + | hypothetical protein TP0361 383774 - 382926 - | lysophosphatidic acid acyltransferase, putative TERM 414 383000 - 383015 + g 72 -6.8 -4.1899 | GCCAGACGTCTAGCT GCGCTT GAAT GAGCGC TTTTGCCTCGCGTAG TERM 415 383441 - 383400 - G 70 -10.1 -3.17219 | gap 1, opp_overlap 383404 CACAAGGGGGACGAA GCGCGCGAGCTCTCGCTTTG CTA CGAAGCGCAACCTCG-GCGC ATCAATATAGCCAAA TERM 416 383799 - 383786 - H 76 -9.5 -3.90318 | opp_overlap 383785 383786 GCATTATGCCATAAA GCGCG CGTG CGCGC CTTTACTCTGGCGGA TERM 417 383916 - 383961 + G 71 -11.1 -2.84919 | gap 1, opp_overlap 383914 383941, overlap 383913 GTGAGTAAATCGATG CAC-CACTGCAAGCGGGTGTGG AAA CCGAACCTGCTCGCAGTGAGAG TAGTTGTAGATGGCT TP0362 383850 - 384086 + | ribosomal protein L28 (rpmB) TERM 418 385045 - 385030 - g 71 -9 -3.53012 | GGTGTCTTCGCCAAA TGCAGC CGAA GCTGCA AAGGGGACCGCGGTA TERM 419 385882 - 385892 + G 100 -5.4 -5.59655 | AGCAGAGGCTGTCGG TGTC TTT GACA TTTTTTCTTCGTTTG TP0363 384578 - 387016 + | chemotaxis histidine kinase (cheA) TP0364 387010 - 388377 + | purine-binding chemotaxis protein (cheW-1) TP0365 388399 - 388863 + | chemotaxis protein (cheX) TP0366 388876 - 389310 + | chemotaxis response regulator (cheY) TERM 420 389387 - 389421 + F 83 -7.7 -4.6645 | overlap 389389 CTTGAGGTTTTTGCC TTCGCGCGCGGAGTG CCCGT CTCTCTGCGTGCGTG TTTTCTGTGTGTGTG TERM 421 389389 - 389419 + F 93 -12.5 -3.9328 | overlap 389387 TGAGGTTTTTGCCTT CGCGCGCGGAGTG CCCGT CTCTCTGCGTGCG TGTTTTCTGTGTGTG TERM 422 390472 - 390459 - g 82 -9.5 -4.26019 | CAATGATATGGAAAA GCGCG TTGA CGCGC TCCAAAAGGAAATCT TERM 423 391438 - 391452 + G 77 -11.4 -3.16742 | GGGGAGCGGGTGGCG GCGCTC GAA GAGCGC TTACTAGAGGTTGAA TERM 424 391873 - 391851 - g 82 -13.4 -2.95116 | overlap 391848 TCAGGAGGTAAAGGA GCGCTACGAG TTT CTCGTTGCGC AGGTTGCGGACCTTG TP0367 389614 - 392439 + | chromosome segregation protein, putative TP0368 392439 - 392774 + | hypothetical protein TERM 425 393038 - 393017 - g 78 -8.7 -4.19624 | GAGCGGGAACAGAAA CCTGAGTCT TCGA AGCCTCAGG TGGTAGAGCCGGTGT TERM 426 394100 - 394110 + G 75 -6.8 -4.42464 | opp_overlap 394081 CGAGATGCCCTCGCT TCGC TCG GCGA TTTCTTTGCGCAGTT TERM 427 394226 - 394201 - g 77 -8.3 -4.12532 | overlap 394187 394186 394202 CGGCGCACAGAGAAA CGTACGCCTCG CGCT CGAAGCATACA AGACAATACTGGAAC TP0369 392771 - 394321 + | hypothetical protein TP0370 394805 - 394389 - | hypothetical protein TERM 428 394676 - 394700 + gF 100 -7.1 -5.53436 | overlap 394678 394679 GAGCGCACACGCTGT CAACTGTGCCT AAT AGGCACAGGTA TTTTTTCTCTTGTGT TERM 429 394678 - 394698 + gF 90 -9.7 -4.38219 | overlap 394676 394679 GCGCACACGCTGTCA ACTGTGCCT AAT AGGCACAGG TATTTTTTCTCTTGT TERM 430 394679 - 394697 + gF 87 -13.2 -3.20491 | overlap 394678 394676 CGCACACGCTGTCAA CTGTGCCT AAT AGGCACAG GTATTTTTTCTCTTG TERM 431 394985 - 395000 + GH 83 -8.2 -4.40358 | opp_overlap 394976 AGAAAACACGCTGAC CCGTGC GTAT GCGCGG TTTTGTCAGGTAACT TERM 432 395404 - 395438 + GH 90 -5.7 -5.18357 | gap 1, overlap 395402 395398 GGGCTACCGCGCTTT CTGCGCACTATGCACA GGAT TGTGCGCGGTG-GCGG TTTTTTAATAGCTTA TP0371 394779 - 395654 + | hypothetical protein TP0372 395776 - 396366 + | 50S ribosomal protein L25/general stress protein Ctc TERM 433 396666 - 396682 + GF 83 -5.7 -4.91511 | GATGCGCGTTTTGTG CGTGCGC TGT GTGCTCG TTTTTCTCCTCCCCT TERM 434 397171 - 397192 + GF 70 -8.7 -3.65522 | GCTTTTGTGTTGCTG CCTTGACGC GGTG GCGTGAAGG TTGTTCGCATGCGTG TP0373 396426 - 397859 + | hypothetical protein TERM 435 398681 - 398633 - gf 73 -8.8 -3.81951 | gap 1, opp_overlap 398657 CCTCATATGAGCAAA GCACGCGCGCAGGGGATTCTGCT CCTG AGCAGGAGCTG-TACGCGCGTGC CCAGTCAATTGTGTT TERM 436 398916 - 398934 + GF 77 -8.1 -4.1673 | overlap 398917 TGCAAGTCGGCCGAT TCGCGCA CGTTT TGCGCGG TTTCTTGCGGAGTTC TP0374 397795 - 400170 + | hypothetical protein TERM 437 400325 - 400337 + F 91 -4.1 -5.54079 | overlap 400318 400326 ATCTGGCTGAGAAAG TGGAT GGC ATCCG TTTTTTCCTTTTTAC TP0375 400328 - 400537 + | hypothetical protein TP0376 401758 - 400853 - | hypothetical protein TERM 438 400926 - 400936 + g 70 -6.8 -4.07568 | opp_overlap 400935, overlap 400898 GCAGCATGCGGATGG GCTG CAA CAGC TTTTCGCAAGCACGC TERM 439 401059 - 401087 + g 73 -4 -4.80178 | gap 1, opp_overlap 401059, overlap 401083 GTGACTGCGCTAAAT CCTTGTAAGCA TTCCCCGC TGCT-ACAAGG TTTTCTTGCTTGATA TP0377 401827 - 401952 + | hypothetical protein TERM 440 402221 - 402169 - g 70 -10.5 -2.76201 | opp_overlap 402167 402173 402178, overlap 402166 AAAAAGAACAACTGA GACGTGCGTCTCTTGCGTGGTGTGC ACA GCACACCGCGCAAGAATTGCATATG CTTGGCCCCGAGCAG TERM 441 402173 - 402217 + G 100 -20.1 -2.90075 | opp_overlap 402169 402166, overlap 402167 402178 AGAACAACTGAGACG TGCGTCTCTTGCGTGGTGTGC ACA GCACACCGCGCAAGAATTGCA TATGCTTGGCCCCGA TERM 442 402178 - 402212 + G 100 -19.4 -3.16267 | opp_overlap 402169 402166, overlap 402167 402173 AACTGAGACGTGCGT CTCTTGCGTGGTGTGC ACA GCACACCGCGCAAGAA TTGCATATGCTTGGC TP0378 401949 - 402329 + | flagellar protein, putative secA 405154 - 402404 - | preprotein translocase subunit SecA TERM 443 402759 - 402769 + g 82 -3.2 -5.28176 | TCAAGAAGTTCCAAA TGGT CCA GCCA TTTTTTATCGATCGC TERM 444 402925 - 402962 + g 70 -3.9 -4.63218 | TCCAGCCAGATGCGT CCTCACCTCCCAGTGCG TAAT CGAACAGGGTGCTCAGG TTTTGTTGAAACGCC TERM 445 403723 - 403741 + g 75 -5.2 -4.66264 | overlap 403724 GTTTTACACCGCGTG TTCTCAGC AGA GCAGAGAG TTTTTCGGACTTTTC TERM 446 404815 - 404826 + g 70 -5.8 -4.27316 | GATACGCCGCTGCCA CGCT CATG AGCG TTTTGCCTTCGCCCG TERM 447 405063 - 405049 - G 73 -11.4 -2.81547 | overlap 405030 405046 CCTGGAGAGGAAGTA CCCAGG ACT CCTGGG CGTTGACGGCATTCA TERM 448 405211 - 405186 - R 89 -3.1 -5.63103 | overlap 405189 CTTGAACCAAAAAAA CAAGGGAGACC GCAC GGTCACCCCCT CCTCCCCCCCCCCTC TERM 449 405208 - 405189 - R 100 -9.2 -4.88485 | overlap 405186 GAACCAAAAAAACAA GGGAGACC GCAC GGTCACCC CCTCCTCCCCCCCCC TP0380 407081 - 405261 - | DNA repair helicase, putative TERM 450 406156 - 406168 + g 79 -4.7 -5.01732 | ATACCGATGGATGTC CCGTC CAG GTCGG TTTTTTCACACAATT TP0381 407935 - 407219 - | hypothetical protein TERM 451 407778 - 407767 - G 88 -2.2 -5.50499 | CCAGACGCAAAAAAA GGAT TGCA ACCC CCGCGCGCGCTAGGT TP0382 408019 - 408141 + | hypothetical protein TP0383 408169 - 408618 + | cell division protein MraZ TERM 452 409285 - 409328 + G 86 -12.4 -3.54919 | gap 1, overlap 409286 GGATTGCGCAGGCGG TGTGCGCGCAGCGTCGGCAGG CGC CCTTTTG-CTCTGCGCGCGCA TTTGCAGAAGTCGTT TP0384 408615 - 409754 + | hypothetical protein TP0385 409767 - 410141 + | hypothetical protein TERM 453 410223 - 410243 + G 84 -7.5 -4.68209 | GGTTTCCTTTGACAG TCGTGCGGT TGT GCCGCGTGA TTTGTTTATTCCGCT TERM 454 410788 - 410776 - g 91 -3.4 -5.47159 | opp_overlap 410769 410766, overlap 410769 GCGGAAGAGAAAAAA GAGA TTTTT TCTC AATTTACTGAACACA TP0386 410125 - 411504 + | UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (murF) TERM 455 412296 - 412312 + G 82 -2.2 -5.3658 | overlap 412297 AAAATTGCGAGCGTG CCCGAA GTATA TTCGGA TTTTATTTTTGTCGT TP0387 411501 - 412655 + | cell division protein (ftsW) TP0388 412633 - 413448 + | cell division protein (ftsQ) TERM 456 414485 - 414496 + G 72 -4.4 -4.72272 | overlap 414454 414453 CCGGTGCGGTAGAGC TTGC GTCA GCAA TTTTTGATACACCGC TP0389 413461 - 414705 + | cell division protein (ftsA) TP0390 414751 - 416007 + | cell division protein FtsZ TERM 457 416395 - 416412 + GF 78 -10.5 -3.44353 | overlap 416394 TGTGCACACCAGGTG GCGTGCG TGAT CGCGCGC TCTTTGAACTTATTT TP0391 416004 - 416924 + | integrase/recombinase (codV) TERM 458 416944 - 416964 + GF 77 -3.1 -5.11718 | overlap 416945 TGTGCGTCATATGTG GGCGGTGCA CTG TGCGCGGCG TTCTTTTTTTTTCAT TERM 459 417321 - 417305 - gf 73 -3.6 -4.77567 | opp_overlap 417306, overlap 417306 ATCCTGAGAAGAAAA TGCAGC AGCAA GCTGCT TATCGCGCGTTAGCA TP0392 416707 - 417666 + | hypothetical protein TP0393 417663 - 418571 + | smf protein (smf) TERM 460 419829 - 419843 + G 82 -9.2 -4.18494 | opp_overlap 419829, overlap 419837 TGACGTTTGAAATTA CCGCTG GCC CGGCGG TTTTCAGTGCAACTG TERM 461 420142 - 420131 - g 70 -3.6 -4.66163 | opp_overlap 420134, overlap 420134 ACTCGTATTCAAAAA CAGC TAAT GCCG ACCCCATTGGGAAAG TP0394 418604 - 420799 + | DNA topoisomerase I (topA) TP0395 420792 - 421685 + | integrase/recombinase (xprB) TP0396 421833 - 422243 + | flagellar basal-body rod protein (flgB) flgC 422328 - 422717 + | flagellar basal body rod protein FlgC TERM 462 422996 - 422979 - g 72 -5.5 -4.56914 | opp_overlap 422982, overlap 422946 422980 TCAGGTAAATCAAAA GCAGCAG AAGA CTGCTGA GTTGACCGAGCAAAT fliE 422773 - 423147 + | flagellar hook-basal body protein FliE TERM 463 423611 - 423593 - g 77 -3 -5.0538 | opp_overlap 423595, overlap 423595 TTTGATCCCAAAAAA TGTGGACC CAT GGGCCATA TTCGACGTCGAGCGA TERM 464 424687 - 424707 + G 79 -3.9 -5.10033 | overlap 424690 TGATCATCTTATACT CCCTTGCCA GTG TGGCAATCG TTTTATTTATCTTCA fliF 423264 - 424967 + | flagellar MS-ring protein fliG 424972 - 426030 + | flagellar motor switch protein G TERM 465 426710 - 426693 - g 73 -9.1 -3.67175 | overlap 426694 ATTTCTGAAAACCAA CGCGCTG TTAT CAGCGCA AATGTGGTGCATGCG fliH 426078 - 427007 + | flagellar assembly protein H TERM 466 427344 - 427358 + G 74 -10 -3.53343 | opp_overlap 427331 GATGCTTTACTCGGA CGCGTT TTG AACGCG TTTGGGAAGGCAATT TP0402 427035 - 428378 + | flagellum-specific ATP synthase (fliI) TP0403 428407 - 428859 + | flagellar protein, putative TP0404 429389 - 428856 - | hypothetical protein TERM 467 429246 - 429233 - G 74 -2.3 -5.06414 | TGCGGGTAAGAAAAA CAGCC GTCA GGGTG CAGGAATTCTTTTCA TP0405 429835 - 429386 - | mcbG protein, putative TERM 468 430196 - 430228 + G 85 -8.5 -4.56775 | overlap 430198 ACAGATTATTGCGCG TGCGTCTGCAGTTTT GCA GAAAGTGCAGACGAA TTTTTCACCACACAT TP0406 430026 - 430832 + | glutamate racemase (murI) TP0407 430960 - 431634 + | phosphoglycolate phosphatase (gph-1) TERM 469 434842 - 434813 - g 76 -4.2 -4.9448 | gap 1, overlap 434815 ATCCAGCAAACAAAA TA-CCCGGTGCGG GAGCG CCGCCCCTGGCTA CACGTCAGAATGTGG TERM 470 434839 - 434815 - g 77 -8.4 -4.08958 | overlap 434813 CCAGCAAACAAAATA CCCGGTGCGG GAGCG CCGCCCCTGG CTACACGTCAGAATG TP0408 431713 - 434967 + | hypothetical protein TP0409 435007 - 435192 + | hypothetical protein TERM 471 435869 - 435901 + G 71 -9.2 -3.53224 | gap 1, opp_overlap 435867 435866 435869 435871, overlap 435871 435874 TGAAGATGAAAAGGA GA-CAGGCCCAAGCT GTCA AGCTCGGGCTTGATC TTTCCGGCGGCACTA TERM 472 435871 - 435898 + G 73 -12 -2.60496 | opp_overlap 435869 435867 435866 435871, overlap 435869 435874 AAGATGAAAAGGAGA CAGGCCCAAGCT GTCA AGCTCGGGCTTG ATCTTTCCGGCGGCA TERM 473 435898 - 435871 - g 77 -12 -3.14195 | opp_overlap 435871 435869 435874, overlap 435869 435867 435866 AAGATGAAAAGGAGA CAGGCCCAAGCT GTCA AGCTCGGGCTTG ATCTTTCCGGCGGCA TERM 474 435874 - 435895 + G 74 -10.1 -3.45571 | opp_overlap 435871 435869 435867 435866, overlap 435871 435869 ATGAAAAGGAGACAG GCCCAAGCT GTCA AGCTCGGGC TTGATCTTTCCGGCG TERM 475 436619 - 436607 - g 72 -6.9 -4.28049 | opp_overlap 436608, overlap 436608 CGCAAAATCTGAAAA CCGCG CTG CGCAG CGCCTGGTTAAACGT secD 435457 - 437208 + | preprotein translocase subunit SecD TERM 476 437535 - 437525 - g 70 -6.8 -4.015 | CGAGGGAGCAAAGAA GGTG GAG CACC TCAGTGTTACGCTCC secF 437205 - 438467 + | preprotein translocase subunit SecF TP0412 438848 - 438543 - | hypothetical protein TP0413 440765 - 438867 - | phosphoglucomutase TERM 477 439626 - 439601 - G 72 -10.5 -3.04144 | gap 1 CGTGCACGTCTAAGA GCTGCGCGATAG CTT CTA-CACGCAGC GAGGTGGGACCATTG TERM 478 440545 - 440556 + g 100 -2.2 -5.75945 | GCGATGACAACACGT GGTT TTGG GACC TTTTTTTTCAAGAAT TP0414 440868 - 442223 + | D-alanine glycine permease (dagA) TP0416 444042 - 442684 - | signal recognition particle protein (ffh) TP0415 442204 - 442737 + | hypothetical protein TERM 479 443027 - 443063 + gT 90 -7.4 -4.77165 | opp_overlap 443033, overlap 443028 443033 443052 GTTTGCAGGTGGTCG AGCATATCGC-TGAGCGT GAA ACGCTCGTGCGAT-TGCG TTTTCTTCTGCGCAC TERM 480 443028 - 443062 + gT 78 -10.9 -3.45817 | opp_overlap 443033, overlap 443027 443033 443052 TTTGCAGGTGGTCGA GCATATCGC-TGAGCGT GAA ACGCTCGTGCGAT-TGC GTTTTCTTCTGCGCA TERM 481 443033 - 443058 + gT 78 -10.5 -3.4724 | gap 1, opp_overlap 443033, overlap 443028 443027 443052 AGGTGGTCGAGCATA TCGC-TGAGCGT GAA ACGCTCGTGCGA TTGCGTTTTCTTCTG TERM 482 443229 - 443218 - GT 70 -5.8 -4.15222 | ACCGGTTCCAACAAA CAGC AGTG GCTG ACCGGTAATACTTTT lnt 445714 - 444035 - | apolipoprotein N-acyltransferase TERM 483 444158 - 444134 - G 93 -8.5 -5.00616 | TCCTTCTGCAAAAAA GATGAGCGCGC ACA GCACGATCACC CAATCTCTCATGCGC TERM 484 444255 - 444245 - G 74 -8.2 -3.89435 | opp_overlap 444244 444245 CTGAAACAACGGAAA CGCG GCG CGCG TTTTTCCCTCTGGGC TERM 485 444245 - 444255 + g 88 -8.2 -4.70659 | opp_overlap 444245, overlap 444244 CTGAAACAACGGAAA CGCG GCG CGCG TTTTTCCCTCTGGGC TERM 486 444364 - 444340 - G 77 -7.1 -4.57569 | opp_overlap 444357, overlap 444349 CTATGGCCCGAAAAA GAGAGACAACA TAG TGCTGCCACTC TGCGCTGGCAGTTTT TERM 487 444364 - 444375 + g 74 -5.8 -4.56775 | opp_overlap 444349, overlap 444357 CATAGTGCTGCCACT CTGC GCTG GCAG TTTTTGACCAAGAGT TERM 488 445150 - 445166 + g 82 -2.9 -5.24129 | opp_overlap 445152, overlap 445152 445160 GCCAGAGACGGAACA CAGGGAC GCT GTCTCTC TTTTTTATGAAGAAG TERM 489 445397 - 445368 - G 100 -13.5 -4.16279 | overlap 445360 CACACGAGCGCAAAA GCGCAGGCACGCG CGGG CGCCTGCTTGCGC AGGATGCATGCGAAC TERM 490 445686 - 445669 - G 72 -10.5 -3.12668 | overlap 445661 TCGCAAATGCCAAGA GCACCGC CGAG GCGGCGC TTGAAACAAGAGGCG TERM 491 445943 - 445966 + G 77 -6.7 -4.5442 | overlap 445945 CGCTGTGTGTCTCGC GCCGAAAGG ATAGCA CCTTTCGCC TTTTCTCCTTAACGC TERM 492 445989 - 446009 + G 71 -11.1 -2.93585 | overlap 445986 CTTAACGCTTGGGGA GCGGAGGAA GAT TTCCACCGC TAATTTACGCTATCG TERM 493 446421 - 446444 + G 73 -9.6 -3.5774 | gap 1 TGTTCCCCGTTTCAT CGCGCG-TGAG GAG TTCACCGCGCG TTTGAAGCGTTGCGT TP0418 445741 - 446934 + | galactokinase TP0419 446931 - 447494 + | survival protein, putative TP0420 447475 - 447702 + | hypothetical protein TP0421 447836 - 449887 + | hypothetical protein TERM 494 450873 - 450859 - g 70 -7 -4.10007 | opp_overlap 450864, overlap 450849 450848 ACAATGCGCGCAAAA GGGCGC CGC GTGCCC CGCTGTTGGTTCCGG TP0422 449871 - 450896 + | hypothetical protein TERM 495 451008 - 451023 + G 75 -5.4 -4.63527 | gap 1 GCGTGCATAGGTACG CCTGAGC ACC GC-CAGG TTTTTGCGCTGGTAG TERM 496 451415 - 451390 - g 70 -6.1 -4.20516 | gap 1, opp_overlap 451393, overlap 451391 CCTCGAGCGAAGAAA TTGCC-TGCGCG CTG CGCACACGGCAC GTGGAGGGCACGCAC TP0423 450921 - 451727 + | hypothetical protein TERM 497 451801 - 451814 + F 90 -8.1 -4.82667 | AAGTGTGTTATGCTT GTCCC GGTG GGGAC TTTTTAGTATACTCG TP0424 451930 - 452628 + | V-type ATP synthase subunit E TERM 498 452622 - 452645 + G 70 -6 -4.19817 | gap 1, opp_overlap 452601, overlap 452608 TGTGTCCCGTGCCGG CGCGTGACTCC ACG GGA-TCGCGTG TTTTAGATAGATGGG TP0425 452606 - 452866 + | hypothetical protein TERM 499 454718 - 454699 - g 71 -2.1 -4.99043 | TGTGGAGAAAGAAAA GGAGATA CGTGCC TTTCTCC AGGGAGAATCGACGA TP0426 453008 - 454777 + | V-type ATP synthase subunit A TERM 500 455712 - 455722 + G 72 -5.4 -4.52589 | opp_overlap 455712 ACACGGGGTACATTA CTGA GGG TCAG TTTTATCTGAAGAAC TP0427 454781 - 456073 + | V-type ATP synthase subunit B TERM 501 456481 - 456505 + G 74 -10 -3.4252 | opp_overlap 456499 AGCTTAGACTTGGAG GCGCATGTTC TCGAC GAACAGGCGC TTCTCCTGGGTGCAG TP0428 456085 - 456705 + | V-type ATP synthase subunit D TERM 502 457490 - 457469 - g 71 -10.9 -2.97021 | gap 1, overlap 457471 GCGTGAAACAGGAGA GACGTTGCGC ATT GCGC-ACGTC AGTGGGTACCTGCCT TP0429 456702 - 458570 + | V-type ATP synthase subunit I TP0430 458607 - 459029 + | V-type ATP synthase subunit K TP0431 459063 - 459884 + | hypothetical protein TP0432 459927 - 460478 + | hypothetical protein TP0433 460533 - 461303 + | hypothetical protein TERM 503 461690 - 461647 - gT 84 -8.8 -4.23674 | gap 1, overlap 461648 461650 CCGGAGGAACAGAAA GGACGT-GCGCATCCCCAGGT GAT ACCCGAGGGTGCGCCACGTGG ACTGCAACCTGGTGA TERM 504 461689 - 461648 - gT 81 -12.3 -3.13722 | gap 1, overlap 461647 461650 CGGAGGAACAGAAAG GACGT-GCGCATCCCCAGGT GAT ACCCGAGGGTGCGCCACGTG GACTGCAACCTGGTG TERM 505 461687 - 461650 - gT 93 -14.9 -3.12253 | gap 1, overlap 461648 461647 GAGGAACAGAAAGGA CGT-GCGCATCCCCAGGT GAT ACCCGAGGGTGCGCCACG TGGACTGCAACCTGG TP0434 461245 - 461928 + | hypothetical protein TP0435 462495 - 462025 - | lipoprotein, 17 kDa (tpp17) TERM 506 462450 - 462437 - G 76 -8.1 -4.18367 | CACGAGACACACAAA GCGCT ACCG AGCGC TCCAACACCAAGGAA TERM 507 462478 - 462466 - G 78 -10.5 -3.45768 | TCCAACACCAAGGAA CGCGC ACA GCGCG CGGACAGATCCTTTC TP0436 463708 - 462626 - | hypothetical protein TERM 508 463381 - 463402 + gr 95 -15.9 -2.87132 | opp_overlap 463367 AGTCGACCACGATGA CGGCCGTCT GATC AGACGGCCG TATCTGCGCAGAGAG TERM 509 463592 - 463580 - GR 81 -10.5 -3.62096 | CCCCACGACCGCAAA CGCGC GAT GCGCG TCAATGAACTCGATG TERM 510 463669 - 463618 - GR 71 -9.5 -3.56092 | gap 3, overlap 463620 463621 CGATGAGCCCGGAAA GACCCCTCCCCCGATCCCCTGTACGC GCC GCGCAC-GGAGA--GGGGGAGGAAAC GGACTTAGGAAGAGA TERM 511 463667 - 463620 - GR 76 -10.7 -3.35775 | gap 3, overlap 463618 463621 ATGAGCCCGGAAAGA CCCCTCCCCCGATCCCCTGTACGC GCC GCGCAC-GGAGA--GGGGGAGGAA ACGGACTTAGGAAGA TERM 512 463666 - 463621 - GR 73 -12 -2.61144 | gap 3, overlap 463620 463618 TGAGCCCGGAAAGAC CCCTCCCCCGATCCCCTGTACGC GCC GCGCAC-GGAGA--GGGGGAGGA AACGGACTTAGGAAG TP0437 464204 - 463674 - | hypothetical protein TERM 513 464161 - 464146 - GH 70 -5.4 -4.35518 | gap 1, opp_overlap 464146 464148 AATTTCATAGCAAAA CCT-CCG CGG CGGCAGG ATTCTAGCCTAGGTG TP0438 464234 - 465043 + | hypothetical protein TERM 514 465394 - 465414 + G 70 -6.7 -4.10612 | GCTACGCTCGAGTCG GGCGACGAG TAT CTCGGCGGC TTTGTCATTCTCAAT TP0439 465130 - 465642 + | purine-binding chemotaxis protein (cheW-2) TP0440 465732 - 466883 + | spore coat polysaccharide biosynthesis protein, putative TERM 515 467678 - 467699 + G 74 -5.9 -4.52589 | gap 1, opp_overlap 467657, overlap 467681 CTGCTTGCAAGCAGG TCA-TCGTGC AGC GCACGATTGG TTTTCTGTACACCAC TERM 516 467681 - 467695 + G 79 -10 -3.79162 | opp_overlap 467657, overlap 467678 CTTGCAAGCAGGTCA TCGTGC AGC GCACGA TTGGTTTTCTGTACA TP0441 466880 - 467797 + | hypothetical protein TP0442 467790 - 469511 + | DNA repair protein (recN) TP0443 469453 - 470307 + | hypothetical protein TP0444 470313 - 471341 + | hypothetical protein TERM 517 471655 - 471699 + G 72 -7.8 -3.9461 | overlap 471648 471656 471685 GTCTTGAGGCGCTTT GTGCTTCTCCGG-GCATCGCGG ATG CCGCG-TGCGCCGCAGATGCGG TTCTTCTTCCCGGGG TERM 518 471656 - 471698 + G 75 -11.3 -2.96444 | overlap 471648 471655 471685 TCTTGAGGCGCTTTG TGCTTCTCCGG-GCATCGCGG ATG CCGCG-TGCGCCGCAGATGCG GTTCTTCTTCCCGGG TERM 519 471728 - 471760 + G 70 -4.8 -4.4648 | gap 1, overlap 471731 471733 GGGGTTGGAAAACTG TCATACGCTTGCCGC CTGT GCGGC-GGTGCGTGA TTTTGTCATGCGCGT TERM 520 471991 - 472028 + G 74 -2.7 -4.88405 | gap 1, overlap 471987 471992 472015 472016 TGGTACGTGATGGAA ATCTTTTGACCGCGTGTG CGG CAGGTGCGG-CAGAAGAG TTTTCTTTCGCAGTT TP0445 471477 - 472106 + | 4-methyl-5(b-hydroxyethyl)-thiazole monophosphate biosynthesis enzyme (thiJ) TERM 521 472416 - 472448 + G 71 -3.4 -4.86033 | gap 1 GGTGTGACGTTGTGC GTTTTGCCG-TTCCT GACA GGGAATCGGCTGAGC TTTTTGTGGCGCTTT TP0446 472148 - 473362 + | gcpE protein (gcpE) TERM 522 473760 - 473780 + G 91 -11.9 -4.07568 | opp_overlap 473753 473752, overlap 473776 473779 TTCCAAACTGCTCCA GTGGCTGAA GGA TTCAGCCGC TTTTCCAGAAGCGGA TP0447 473359 - 474483 + | hypothetical protein TERM 523 474645 - 474659 + G 78 -8.6 -4.18164 | ATTGGACGAGTTGTA CTCATC TGC GATGAG TTCTTTTGCGCAGTT TP0448 474541 - 475623 + | uracil phosphoribosyltransferase, putative TERM 524 476039 - 476019 - g 76 -4.1 -4.91109 | GCGTGATCAGAAAAA TACTCAA CGTATTC TTGAGTA TGCAAACGTATTGGT TP0449 475627 - 476217 + | hypothetical protein TERM 525 476238 - 476254 + F 70 -5.1 -4.43272 | overlap 476230 CACTGAATGCGCGTG CGGTGTA GCG TGCACTG TTTTACGTTTTAGGT TP0450 476354 - 478405 + | elongation factor G TP0451 478576 - 478394 - | hypothetical protein TP0451a 478421 - 478777 + | permease TERM 526 480238 - 480263 + G 72 -6.8 -4.28548 | overlap 480260 GCATCCATTTGCTGG CAGCCATCGC ACATAC GTGATGGCCG TTTTGGTAAGTGGCT TERM 527 480573 - 480593 + G 72 -4.7 -4.60797 | ACATGCAACTGACTT TGAGCGG TATTTCC CTGCTCA TTTTATCTCTGAAGG TERM 528 480790 - 480804 + G 72 -5.6 -4.52897 | GATCGCTACGGTGCT GACGCG CTC CGCCTC TTTCTTGTTCGTTCT TERM 529 480881 - 480911 + G 93 -8.4 -4.75174 | opp_overlap 480881 AAGATATTTTGAAGA CTGTGATTATCCCA TTG TGGAATAGTTACAG TTTTTACGTTACGTA ileS 478855 - 482130 + | isoleucyl-tRNA synthetase TP0453 482117 - 482980 + | hypothetical protein TERM 530 483231 - 483175 - T 77 -8 -4.13728 | gap 1, overlap 483214 483215 483223 TAGAGACTTCGAAAA GGGCTGTCCTTCCTGTGGGTATGCGTT CGGG AACG-AGAACCGGAGAAAGGGCAGCCC CCCGGCACCGAAGGG TERM 531 483277 - 483223 - T 80 -10 -3.9398 | gap 3, overlap 483175 483214 483215 CGAGAACCGGAGAAA GGGC-A-GCC-CCCCGGCACCGAAGGG AGCC CCCCGCCGTGCCGAAGAGGCCTTGCCC ACCTGGGTCTACGCA TP0454 484019 - 483330 - | hypothetical protein TERM 532 483946 - 483960 + g 74 -7.8 -4.13767 | opp_overlap 483946, overlap 483918 TGGATCACCTCATAA CCGCAC TGC GTGTGG TTTTCAAATACCAGA TP0455 485020 - 484016 - | hypothetical protein TERM 533 484476 - 484454 - G 71 -10.5 -2.91593 | overlap 484453 CACGGGGGGAGAAAC CGGCAACGC GCCGA GCGCCGCCG CAGCAGGGGCAGGCT TERM 534 484714 - 484733 + g 76 -9.2 -3.75292 | TGCGTATCCATTCGT CCGTGTGC GCAA GCGCGCGG TTCTTCATCGTCCGT TP0456 486393 - 485077 - | hypothetical protein TERM 535 485350 - 485322 - G 75 -5.1 -4.72272 | GCGGTGGATGAAAAA TGAGCGCGTTCGC GTG GTGTGCACGCTCA TCAGCAGTGCGGTGG TERM 536 485977 - 485941 - G 70 -6.3 -4.25104 | opp_overlap 485928 TGGCTCTGAGTAAAA GCCCTCAGCGCTCTGTG TGG CTAAGAGTGCGGGGGGC GTCAGAGTGAGCGAT TERM 537 487670 - 487687 + G 74 -2.5 -5.09426 | overlap 487670 487669 TTTAACGCGGCGCAT GAGCGCG CACG CGCACCC TTTTTTGGCATTGAC TP0457 486461 - 488242 + | hypothetical protein TP0458 488333 - 488911 + | hypothetical protein TP0459 488940 - 489725 + | hypothetical protein TP0460 489768 - 490475 + | hypothetical protein TP0461 490476 - 490835 + | hypothetical protein TERM 538 490828 - 490859 + F 74 -2.8 -4.91852 | CCCCCCCCCGGTGGC GCGGATAGCGGCCT CGGG GGGCTGCAGTGTGC TTTGTTTTTGGTAGG TP0462 491040 - 491882 + | hypothetical protein TP0463 491887 - 492219 + | hypothetical protein TP0464 493030 - 492278 - | hypothetical protein TERM 539 492874 - 492843 - G 74 -7.9 -4.11216 | gap 1, opp_overlap 492869, overlap 492844 492846 TGCGGAGCGGGAAAA GCACCGGCAGGCGC AGAAG GTGCC-GCCGGTGA ACAGAATACGGCAGC TERM 540 492873 - 492844 - G 75 -11.4 -3.06515 | gap 1, opp_overlap 492869, overlap 492843 492846 GCGGAGCGGGAAAAG CACCGGCAGGCGC AGAAG GTGCC-GCCGGTG AACAGAATACGGCAG TP0465 493899 - 493027 - | hypothetical protein TERM 541 493102 - 493090 - GR 75 -6.9 -4.41616 | AGGTTGTGAAATAAA GCGCC AGG AGCGC TGAAAGTCCTCAACC TERM 542 493813 - 493794 - GR 73 -6.4 -4.41114 | overlap 493804 GCACCACACAAGAAA CCAGTACA AACG CGCACTGG CGAGCGAGAACCATG TP0466 495001 - 493832 - | hypothetical protein TERM 543 494473 - 494456 - GH 71 -4.2 -4.66609 | opp_overlap 494465 CAGGGTATCCAAAAA CTTTTC GCCGAG GAAAAG AAGCGTATTTTTCTC TERM 544 494851 - 494824 - GH 79 -7.7 -4.39568 | overlap 494818 494826 494849 ATCCAGAGAGCAAAA GACCTTGCACC GTTTTA GGTGCAAAGGC ATCGAGTGCGATACC TERM 545 494849 - 494826 - GH 73 -8.9 -3.79993 | overlap 494818 494824 CCAGAGAGCAAAAGA CCTTGCACC GTTTTA GGTGCAAAG GCATCGAGTGCGATA TP0467 494992 - 495240 + | hypothetical protein TP0468 495740 - 495210 - | hypothetical protein TP0469 497161 - 495698 - | hypothetical protein TERM 546 496769 - 496793 + grH 74 -7.8 -4.10925 | gap 1, opp_overlap 496748 496762 496749 496783, overlap 496749 496781 496783 GCGAGACACTCCCCG GGGCG-GGGTG AGAA CACGCGCGCCC TTTTGCCGCGTGTCT TP0470 498263 - 497154 - | hypothetical protein TP0471 498255 - 499664 + | hypothetical protein TP0472 501752 - 499677 - | excinuclease ABC, subunit C (uvrC) TERM 547 500852 - 500883 + g 81 -4.6 -5.14965 | gap 1, opp_overlap 500852, overlap 500858 GGTCAGAGTAGTAAG TGATGA-GAAATTCT GAA AGGATTTCCTCTTCA TTTTTTAATGAACGT TERM 548 501012 - 501025 + g 75 -5.3 -4.62984 | TGCACGTTCGTCCAT GTCTT GAAC AAGAC TTTTGTGTGTAATAC TP0473 502471 - 501827 - | hypothetical protein TERM 549 502154 - 502139 - G 86 -3.9 -5.38054 | overlap 502140 GTGCACAAAGAAAAA CGACG TATACG CGCCG AAGAGCGCAGACACG TP0474 503273 - 502536 - | hypothetical protein TERM 550 502940 - 502953 + g 93 -5.9 -5.20333 | overlap 502941 ACAAATTGCGCACGT TCGCG GCCG CGCGG TTTTTGTTATCGGTG pgi 505021 - 503414 - | glucose-6-phosphate isomerase TERM 551 504410 - 504397 - G 88 -2.3 -5.52079 | ATACCAAAATAAAAA GCGTG GTCT CAAGC GGTAGTTTTGAGAGT TERM 552 504725 - 504748 + g 81 -6.7 -4.59511 | overlap 504713 CTGCACGCCGAGGCG CGTTAGGTG ATGCAG CACCTTACG TTTTTCCCCCGTGTT TP0476 506431 - 505085 - | acetate kinase (ack) TERM 553 505894 - 505884 - G 71 -2.4 -5.02323 | GCAGTATAAAGAAAA CTCG TGC CGTG AAAGCCGTAGCGACG TERM 554 506219 - 506200 - G 72 -10 -3.29144 | overlap 506184 TCATGTCGCTGATAA CACCGACG TGCG CATCGGTG AGGGTGCTGATGATA TP0477 507223 - 506498 - | glucose-6-phosphate 1-dehydrogenase, putative TERM 555 506874 - 506832 - G 72 -9.9 -3.29273 | gap 1, opp_overlap 506832 506837, overlap 506837 CCCAGGAGTATAATA TCAAAGCACGGCACGCCACG CTGT CTTGG-GAGCCGTGCTTCAA TTTCCTGTGAGTATG TERM 556 506837 - 506869 + g 72 -9.8 -3.32159 | gap 1, opp_overlap 506832 506837, overlap 506832 GAGTATAATATCAAA GCACGGCACGCCACG CTGT CTTGG-GAGCCGTGC TTCAATTTCCTGTGA TERM 557 506869 - 506837 - G 81 -9.8 -3.98159 | gap 1, opp_overlap 506837 506832, overlap 506832 GAGTATAATATCAAA GCACGGCACGCCACG CTGT CTTGG-GAGCCGTGC TTCAATTTCCTGTGA TERM 558 506920 - 506945 + g 90 -10.4 -4.41348 | overlap 506921 CCGGGGCGTCTTCTC CCCTGACGCG AAACAC CGCGTCAGGA TTTATTTCCAGAGGC TERM 559 506921 - 506944 + g 89 -13.9 -3.24488 | overlap 506920 CGGGGCGTCTTCTCC CCTGACGCG AAACAC CGCGTCAGG ATTTATTTCCAGAGG TP0478 508831 - 507284 - | glucose-6-phosphate 1-dehydrogenase TERM 560 508670 - 508653 - G 74 -7.7 -4.07687 | overlap 508666 AGCCGTGCGCGAAAA GACTCTG TAGA CAGAGCC GTACGCCCTGCGCCG TP0479 509578 - 508904 - | hypothetical protein TP0480 509690 - 510178 + | hypothetical protein TERM 561 510964 - 510948 - gf 85 -6.5 -4.91573 | opp_overlap 510947 510949, overlap 510950 AAAATACAGGAAAAA GCGGC GGAGCTG GCCGC CCCCGTGTCTTTTGG TERM 562 510965 - 510986 + GF 73 -5.7 -4.4009 | overlap 510947 510949 510978 510979 GGCGGAGCTGGCCGC CCCCGTGTC TTTT GGCGCAGGG TTTTCTGCGCTCAAA TERM 563 510979 - 511019 + GF 70 -11.2 -2.70298 | opp_overlap 511002, overlap 510965 510978 CCCCCGTGTCTTTTG GCGCAGGGTTTTCT-GCGCT CAA AGCGCAAGTGGACCC-GCGC ATTCTCCTTGAACGC TERM 564 511085 - 511054 - gf 77 -5.8 -4.59853 | gap 1, overlap 511056 511073 TGAAGGCGTTAAAAA CT-CCCACCCTCGTA CAG CACGTGGGTGCGCAG GCGCCCAAACTTGCA TERM 565 511257 - 511218 - gf 75 -5.6 -4.63218 | overlap 511221 511222 511223 511225 GTGTCGGCAATAAAA CAAGGTATCGAGACGCTC GATA GAGCGCGCCGATCCACTG AGGAAGCCCTCGCTA TERM 566 511253 - 511221 - gf 75 -7 -4.43307 | gap 1, overlap 511218 511222 511223 511225 TCGGCAATAAAACAA GGTATCGAGACGCTC GATA GAGCGCGCCGAT-CC ACTGAGGAAGCCCTC TP0481 510210 - 511643 + | hypothetical protein TP0482 511610 - 512458 + | hypothetical protein TP0483 513648 - 512524 - | hypothetical protein TERM 567 512891 - 512875 - G 80 -5.1 -5.00616 | GTTGCGCTTAAAAAA GCACATC TCA AACGTGC CGACAAACCCGATAG TP0484 515650 - 513635 - | hypothetical protein TERM 568 514266 - 514289 + gr 81 -9 -4.11216 | gap 1 GCTTCTGGTATTGGC TCGCA-GGTAA AGA TTACCATGCGA TTTTCCCGATCCGCG TERM 569 514699 - 514676 - GR 71 -4.4 -4.55287 | opp_overlap 514682 514683, overlap 514677 GCGACGCACAGAAAA GGAACGGGGC GCTG ACGCCGTGCC GTTCTGCGGGACCAG TERM 570 515354 - 515368 + gr 88 -11.4 -3.84451 | CACGTCCCGATGGTA GACGGG CAC CCCGTC TTTGAGTTTGAGCCA TP0485 517388 - 515544 - | adenylate cyclase TP0486 518980 - 517526 - | antigen, p83/100 TERM 571 517966 - 517977 + g 74 -5.8 -4.52047 | CCAACCGCTCCCGTT GTGC TTCT GCAC TTTTCTGCTGTGCTC TERM 572 518770 - 518758 - G 81 -10.5 -3.62046 | CTACTGCGTGAATAA GCGCG TAA CGCGC ACGATCCCCCGCAAC TP0487 520646 - 519069 - | hypothetical protein TERM 573 520322 - 520334 + g 100 -4.7 -5.93809 | overlap 520323 GTACGGACCCTGATG CGCGC AGG GCGCC TTTTTTTTCTCCAAA TERM 574 520323 - 520333 + g 78 -8.2 -4.15201 | overlap 520322 TACGGACCCTGATGC GCGC AGG GCGC CTTTTTTTTCTCCAA TERM 575 521117 - 521141 + G 70 -4.2 -4.62069 | gap 2, overlap 521120 ATGTGCCTGCGCGGA GCCCACGCGCCC TGT GGG-GCG-GAGC TTTTTCCCGTAAAAC TP0488 520874 - 523411 + | methyl-accepting chemotaxis protein (mcp2-1) TERM 576 523439 - 523450 + F 74 -2.2 -5.1356 | ACGTGCTCTGCTGTT CTGC GCGT GTAG TTTTTCTTAGTGCAG TP0489 523859 - 524827 + | hypothetical protein TERM 577 524915 - 524927 + G 72 -10.5 -3.1162 | opp_overlap 524908, overlap 524920 524922 GGCAGACATTGGCGC CGGCG CTG CGCCG TCTTGCGCTGTTTGT TP0490 524824 - 525012 + | hypothetical protein TERM 578 525227 - 525261 + G 78 -10.6 -3.42503 | opp_overlap 525224 525228, overlap 525228 TTCACGAACTGAGGA ACGCACGGCTCATTCG ATC CGAGTGGGCTGCGCGG TTGTACGTGTTCGCG TERM 579 525260 - 525228 - g 70 -9.7 -3.22884 | opp_overlap 525228 525227, overlap 525224 TCACGAACTGAGGAA CGCACGGCTCATTCG ATC CGAGTGGGCTGCGCG GTTGTACGTGTTCGC TERM 580 525228 - 525260 + G 84 -14.1 -2.6518 | opp_overlap 525224 525228, overlap 525227 TCACGAACTGAGGAA CGCACGGCTCATTCG ATC CGAGTGGGCTGCGCG GTTGTACGTGTTCGC TERM 581 525327 - 525337 + G 72 -6.8 -4.24948 | opp_overlap 525326, overlap 525326 TTCTCCTGCAATGAG TGCG GTG CGCA TTTTAACTATGCTCG TERM 582 525514 - 525527 + G 72 -4.5 -4.62984 | opp_overlap 525507, overlap 525512 525514 525523 TATAAGATCCCTGCT CCTTC AGTG GAGGG TTTTCTCTATCCTGA TERM 583 525723 - 525733 + G 82 -3.2 -5.24129 | TTCTGAGGCAGCACG CATC GCA GGTG TTTTTTATAACCGGA TERM 584 525817 - 525831 + G 70 -7 -4.08557 | opp_overlap 525810 525817 GAAATTGAGGGGAAA GCGCAC CCC GAGCGC TTGTTCTTTAAAGAC TP0491 525019 - 526053 + | hypothetical protein TERM 585 526663 - 526651 - g 100 -4.8 -5.75342 | opp_overlap 526651 526652, overlap 526652 TGTTTGCAAAAAAAA GCGA GCGTA TCGC CGTTTTTTCAGATCG TERM 586 526652 - 526665 + G 81 -4.5 -5.0538 | gap 1, opp_overlap 526651 526652, overlap 526651 GTTTGCAAAAAAAAG CGAGCG TAT CGC-CG TTTTTTCAGATCGGA TERM 587 526916 - 526931 + G 70 -10.4 -3.14132 | overlap 526895 GTTGACGTATGCTGT TGCGCC TTTA GGCGCA TTGCTGACGAAAAGC TP0492 526077 - 527894 + | DNA primase (dnaG) TERM 588 528203 - 528189 - g 73 -11.4 -2.62263 | AGCTGTGCGACAGTA GCCGTG GGG CACGGC AGAACTTGCTGTCAA TP0493 527891 - 529726 + | RNA polymerase sigma factor RpoD TP0494 529736 - 530557 + | hypothetical protein TP0495 530795 - 530646 - | hypothetical protein TP0496 530887 - 531876 + | hypothetical protein TP0497 531889 - 532923 + | rod shape-determining protein (mreB) TP0498 532928 - 533791 + | rod shape-determining protein (mreC) TP0499 533788 - 534294 + | rod shape-determining protein (mreD) TERM 589 534459 - 534439 - g 100 -3.2 -6.06723 | overlap 534440 TCGTTCAAAAAAAAA TCGCTGAA CATAT CTCAGCGT AGTAAAGTAATTCCT TERM 590 534458 - 534440 - g 72 -6.7 -4.22949 | overlap 534439 CGTTCAAAAAAAAAT CGCTGAA CATAT CTCAGCG TAGTAAAGTAATTCC TP0500 534295 - 536169 + | penicillin-binding protein (pbp-1) TERM 591 536638 - 536664 + G 74 -2.3 -5.02439 | gap 1 TGTCTCAGCCGGATC TCGGCA-CTGCA TCCG TGTACCTGCCGA TTTTTCTCGTTATGT TP0501 536166 - 537467 + | rod shape-determining protein (rodA) TERM 592 537690 - 537701 + G 82 -2.2 -5.40279 | gap 1, overlap 537671 537670 CGCGCATGAGCCCAT GCGCG ATC CG-GC TTTTATTTTCTTTTC TERM 593 537836 - 537858 + G 76 -9.2 -3.85698 | AGACGTTTGAGGATT TCTTTCGTGT CGA GCACGAGAGA TTTGTAAGGCAGAAA TERM 594 537891 - 537879 - g 90 -9.1 -4.55383 | opp_overlap 537888 AAGGCAGAAAAAGAA GCGTG TCG CACGC ACTGCGCTGTTAGAG TP0502 537493 - 538389 + | hypothetical protein TERM 595 538723 - 538750 + G 74 -9.8 -3.53811 | TATTGCAGCAGAGCT CGGACGCCCTGC CAAA GAAGGGTGTTCG TTTGCGGCACCTACG TP0503 538368 - 538931 + | hypothetical protein TP0504 538913 - 539053 + | hypothetical protein TP0505 540396 - 539062 - | hexokinase (hxk) TERM 596 539348 - 539338 - G 75 -5.4 -4.7261 | ATCGAGCAAAAGAAA GAGA ATC TCTC GGTCTGTGTCGGTGC TERM 597 541445 - 541456 + G 70 -4.4 -4.49352 | overlap 541452 AAAGCCAGTGTTCGA TCCT GACG AGGA TTTCTCTTTTGCTGT TERM 598 542130 - 542147 + G 71 -2.6 -5.02074 | opp_overlap 542141 542142, overlap 542132 AGCCTGTCGGGCACC CCGCAG AATAAG CTGCAG TTTTTTCAGCAGTGG tig 541131 - 542459 + | trigger factor TERM 599 542599 - 542611 + G 73 -4.1 -4.8667 | GTGGCGGATTTAGTT GTAGC GCA GTTAC TTTTTCTAGAGTCTC TP0507 542452 - 543063 + | ATP-dependent Clp protease proteolytic component (clpP-1) clpX 543050 - 544297 + | ATP-dependent protease ATP-binding subunit TP0509 544394 - 544960 + | alkyl hydroperoxide reductase (ahpC) TERM 600 544960 - 544999 + T 100 -7.7 -5.36364 | gap 1, overlap 544963 544964 AATCGGTAAGATTTA GTGC-GGCCCGGAGGGCG CGCGT CGCCCTCCCCGCCTGTTC TTTTTCTGTTTTTGC TERM 601 544963 - 544996 + T 100 -10.2 -4.69512 | gap 1, overlap 544960 544964 CGGTAAGATTTAGTG C-GGCCCGGAGGGCG CGCGT CGCCCTCCCCGCCTG TTCTTTTTCTGTTTT TERM 602 544964 - 544994 + T 93 -13.9 -3.90582 | overlap 544963 544960 GGTAAGATTTAGTGC GGCCCGGAGGGCG CGCGT CGCCCTCCCCGCC TGTTCTTTTTCTGTT TP0510 546958 - 545141 - | GTP-binding protein LepA TP0511 547001 - 547627 + | transcription factor (carD) TERM 603 548764 - 548776 + G 91 -7.7 -5.06414 | CAGGCCCTGGACACG CACGT AAC ACGTG TTTTTGTTAAGGCAA TP0512 547672 - 548871 + | hypothetical protein TERM 604 549711 - 549701 - g 74 -3.2 -4.9218 | GATGTAGCAGAAAAA TGCA AGC CGCA CTTTTTCAGTAGTGC trkA 548945 - 550345 + | potassium transporter peripheral membrane component TERM 605 550748 - 550736 - g 79 -4.1 -5.1675 | overlap 550737 CCATCGAGCAAAAAA CTACG CAG CGTAA CCCTCGCTCAACGGT TERM 606 551092 - 551061 - g 100 -7.4 -5.68023 | opp_overlap 551064 551066, overlap 551064 GGATAAGCAAAAAAA GCATTCTATCGATA TAGT TGTCGATAGAATTC AATTGTCAGATACAG TERM 607 551064 - 551089 + G 70 -9.9 -3.2375 | opp_overlap 551061 551064, overlap 551066 TAAGCAAAAAAAGCA TTCTATCGATA TAGT TGTCGATAGAA TTCAATTGTCAGATA TERM 608 551273 - 551262 - g 86 -3.6 -5.40072 | TTTTTCGCAAAAAAA CGCG TGCG CGCA CTGTAATGTCTCCGT TERM 609 551818 - 551793 - g 100 -2.5 -6.53504 | gap 1, opp_overlap 551797 551798, overlap 551795 551796 TATAGAAAAAAAAAA CATCCA-CGCAC TCA GTGCGCTGTCTG TAGATGATTCGTGTG TERM 610 551815 - 551795 - g 74 -3.1 -4.88107 | opp_overlap 551797 551798, overlap 551793 551796 TAGAAAAAAAAAACA TCCACGCAC TCA GTGCGCTGT CTGTAGATGATTCGT TP0514 550459 - 553341 + | excinuclease ABC, subunit A (uvrA) TERM 611 554702 - 554690 - g 74 -3.4 -4.99643 | TAGTAAAAAAAACAA CTCT TCTCC AGAG CGTAACTTCTTCTAC TERM 612 556005 - 555980 - g 70 -4.1 -4.72986 | CACTGTGATTAAAAA TGAGAAACTAA CGCC TTACTTTCCCA CCCAGTCATCGCAAT TP0515 553338 - 556313 + | hypothetical protein TP0516 557907 - 556327 - | virulence factor (mviN) TERM 613 556634 - 556623 - G 93 -2.2 -5.65177 | ACATCCATAAAAAAA CGGT CTGT ACCA TACTCGCCGCGCTCA TP0517 558494 - 557904 - | Holliday junction nuclease (ruvC) TERM 614 558103 - 558119 + g 83 -5.2 -5.16237 | CTTTTTTCTGCTTGG GCAATA CCAGT TATTGC TTTTTTAATCGCATT TP0518 559168 - 558476 - | hypothetical protein TP0519 560541 - 559165 - | response regulatory protein (atoC) TERM 615 561120 - 561140 + r 74 -3.2 -4.85195 | overlap 561122 GAGCCGTTCGATTTC CTCCTCTA CCACA TGGAGGTG TTTTTGGATTCTTTT TERM 616 561551 - 561566 + r 71 -6 -4.36903 | opp_overlap 561550, overlap 561548 TGGTTTACCCAAGAG CCGTGC AATT GCTCGG TTTGTCTTTAATGGA TP0521 563007 - 561736 - | DNA polymerase III, gamma and tau subunits, putative TERM 617 562047 - 561992 - G 79 -12.8 -3.1085 | TCAAGTGAGGTAAGA TCCATTCCTGATACTTGAGGTTGAGT ACCT ACCGAAACCCAAGTATCAGGAATGAT GCGTCCGATACACCT TERM 618 562156 - 562168 + g 79 -4.1 -5.09895 | opp_overlap 562147 TAAATAGTGCAAGAG TACAC CCT GTGTG TTTTTTGCATCGGTC TERM 619 563034 - 563013 - R 73 -5.8 -4.4261 | overlap 563014 TCTCGAACACGAAAA CGCGCCTA CATCTT CAGGCGCA TATAGCGAACGCCAT TP0522 563497 - 563018 - | hypothetical protein TP0523 564648 - 563494 - | UDP-N-glucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (murG) TERM 620 563883 - 563866 - G 74 -7.7 -4.14598 | CTGAATGAAAGGAAA CGACATG TAGG CATGCCG AGCATTGACGCTAAG TERM 621 564121 - 564107 - G 100 -2.8 -5.93809 | TGTGCAGAAAAAAAA TCTTGT CGC ACAGGA TTCCCCGTGCAGTGA TP0524 567297 - 564652 - | ATP-dependent protease LA (lon-2) TERM 622 564997 - 565009 + g 73 -9.1 -3.66178 | CATGGTAATCCCCGC GGACG GAC CGTCC TTTGGGGTTGCGCCC TERM 623 565392 - 565403 + g 79 -2.2 -5.24129 | overlap 565371 CAAGCTTGCGATGCA GCTT GTCA AGGC TTTTTTCTAGCCCCC TERM 624 566396 - 566411 + g 79 -4.8 -5.01546 | TTCTCCACCCGACTG TTCAAA TCAT TTTGAA TTTTTCTCTGGATTT TERM 625 567378 - 567362 - H 82 -5.2 -5.00884 | overlap 567366 AGGCCTTTTAAAAAA TATACC TGCGC GGTATA CTGCGCCCCCGCAGG TP0525 567433 - 567996 + | translation elongation factor P (efp) TERM 626 569300 - 569312 + G 74 -2.7 -5.02323 | TCGGTATCCACGATT TCGAA CAC TTTGA TTTTATTTCTCCTCC TERM 627 570066 - 570028 - g 100 -14.4 -3.28712 | opp_overlap 570021, overlap 570051 CCCGCTTTGCTAGAA CGTAGGGGCCGCGCTGAG AAG CACGGCACGTCCCCCACG CGCGCAGCTTTCCTG TP0526 568144 - 570150 + | ATP-dependent helicase (hrpA) TP0527 570827 - 570198 - | V-type ATPase, subunit D (atpD-2) TERM 628 570339 - 570352 + g 74 -2.4 -5.06735 | CTTGCTCAGCGCATT CACA CGTCGC TGTG TTTTTCTCATTTCTG TP0528 572364 - 570922 - | V-type ATP synthase subunit B TP0529 574178 - 572361 - | V-type ATP synthase subunit A TERM 629 572662 - 572644 - G 76 -7.4 -4.25104 | TCCGTCGGATCAAAA GCGTTCTG CTG CAGAAAGC CACCTTTGATCATTT TERM 630 573888 - 573865 - G 73 -11.8 -2.81316 | gap 1, overlap 573861 573864 573884 CCAGGACGCAAGAAG GCGCCGTCTTC TTG GAAGA-GGCGC TCAAGTGGGCGCTGA TP0530 574801 - 574175 - | V-type ATPase, subunit E, putative TP0531 575145 - 574807 - | V-type ATPase, subunit F, putative TP0533 577129 - 575765 - | V-type ATPase, subunit I (atpI-2) TERM 631 575953 - 575943 - G 88 -2.4 -5.53991 | opp_overlap 575945, overlap 575945 CATGTACCAAAAAAA GAGG AGT CCGC ACACTCCCGTTTTTG TP0534 578147 - 577122 - | hypothetical protein TERM 632 577254 - 577239 - G 100 -9 -5.31275 | CTTCATCATAAAAAA TGCGAC GATC GTCGCA GGAGTAAAGAGCTGC TERM 633 577389 - 577377 - G 73 -9.1 -3.69663 | AGGATTATTTAAGAA GCGCT CAT AGCGC CATCCACTCCACGCC TERM 634 577505 - 577493 - G 86 -9.1 -4.31433 | opp_overlap 577493 577492 577490 577486 CACCGTTAGAAGAAA GCTCC GAA GGAGC GTCTTTCTTCTGTAC TERM 635 578183 - 578163 - R 84 -6.1 -5.11613 | overlap 578174 ACACTACCCAAAAAA GAAACCATC AAG GAAGGCTTC GAAGCGCTCCACGTC TP0535 578363 - 578151 - | hypothetical protein secG 578905 - 578504 - | preprotein translocase subunit SecG TP0537 579804 - 579055 - | triosephosphate isomerase (tpi) TERM 636 579108 - 579083 - G 71 -3.1 -4.75472 | overlap 579085 GCGATAGGAACAAAA GACGCAGCCTC CAGC GAAGCACCGCC AATGAGTCCCCCGTC pgk 581214 - 579955 - | phosphoglycerate kinase TERM 637 580926 - 580939 + gH 70 -9.5 -3.41936 | overlap 580924 580937 CAAGGCAGTCCGCAA CCGGC TTAA GCCGG TGTTTGCCGTTAATG TP0539 581186 - 581407 + | hypothetical protein TP0540 581688 - 582059 + | anti-sigma F factor antagonist (SpoIIAA-2) TERM 638 582127 - 582162 + F 77 -8.3 -4.16182 | gap 1, overlap 582129 CCACAGCTTTTTGCT GCCGCGTGCCGCTGCA CGGAC TGCAGTGGTA-GCGTC TTTCCTTTATACTCA TERM 639 582129 - 582160 + F 74 -9.5 -3.67003 | gap 1, overlap 582127 ACAGCTTTTTGCTGC CGCGTGCCGCTGCA CGGAC TGCAGTGGTA-GCG TCTTTCCTTTATACT era 582189 - 583148 + | GTP-binding protein Era TP0542 584866 - 583145 - | diphosphate--fructose-6-phosphate 1-phosphotransferase TP0543 585609 - 584926 - | Holliday junction DNA helicase (ruvA) TERM 640 585444 - 585430 - G 70 -5.6 -4.32649 | opp_overlap 585432, overlap 585433 ATTCGAAAAACCAAA GAGGCG AAG CGCATC TTCACGGTGATACAA TP0544 587519 - 585651 - | hypothetical protein TERM 641 585974 - 585958 - G 81 -7.2 -4.71828 | opp_overlap 585957, overlap 585960 AGTGCAGCAACAAAA GCGGCA ACCTG CGCCGC CTGCTGTATACGCTT TP0545 588608 - 587544 - | methylgalactoside ABC transporter, periplasmic galactose-binding protein (mglB-1) TERM 642 588714 - 588702 - R 76 -3.4 -5.06735 | overlap 588705 TAGAAATTAGAAAAA GGAT GGATT ATCC AGTGCTGCCACCAAT TP0546 590693 - 588693 - | periplasmic serine protease, putative TP0547 591535 - 590405 - | penicillin tolerance protein (lytB) TERM 643 590576 - 590553 - G 76 -11 -3.36648 | gap 1, overlap 590543 590557 GAAGACACCCGAGAA GCG-ACAGGCG CGC CGCCCGTGCGC AGCGCCTGCTCCACA TERM 644 590584 - 590557 - G 76 -12.6 -2.60257 | overlap 590543 590553 ACACCCGAGAAGCGA CAGGCGCGCCGC CCGT GCGCAGCGCCTG CTCCACAGCAGCGAT TERM 645 591942 - 591960 + G 72 -7.4 -3.92542 | opp_overlap 591954 GGTGAGCTTTACAGC GCTGGC AGATGAC GCCAGC TTCTTTGAAGCTAAC TP0548 591679 - 592983 + | hypothetical protein TERM 646 593712 - 593689 - g 72 -4.4 -4.69962 | GAGAGGAAAAAATAA CCCGGTGCTC ATCG GAGAGCCAGG TGTCGGGAAAACTTC TERM 647 594304 - 594325 + G 70 -5.9 -4.18762 | gap 1, opp_overlap 594299 GGTACAACAGCGCGC GGATACGCAG GTA TTGCGT-TCC TTTTCCATAAAAGTT TERM 648 594890 - 594900 + G 71 -2.4 -5.01497 | CTTACCGAGCGCGTA CGGC ACC GCCC TTTTTCTGTCATCCT TP0549 593081 - 595525 + | ATPase (clpC) trmE 597053 - 595566 - | tRNA modification GTPase TrmE TERM 649 596102 - 596089 - G 71 -3.1 -4.87803 | gap 1, overlap 596090 CAGTCCGAAAGAAAA GC-GCA ATC TGCAGC CTGCACACCTGCACG TERM 650 596394 - 596438 + g 76 -10.6 -3.29461 | gap 1, overlap 596396 GCGCACTCCCGTTCG CTGCAGCGCACGCTCC-TGCC AGCA GGCACGGAGCCTGCGCAGACG TTCTACCAACGGTTC TERM 651 596396 - 596437 + g 73 -11.6 -2.57463 | gap 2, overlap 596394 GCACTCCCGTTCGCT G-CAGCGCACGCTCC-TGCC AGCA GGCACGGAGCCTGCGCAGAC GTTCTACCAACGGTT TP0551 598145 - 597057 - | phosphatase TERM 652 597842 - 597829 - G 70 -3.8 -4.69415 | overlap 597819 AGCAACACAAACAAA GCAC TCGCCT GTGC ATGCCCGGAGGGTGT TERM 653 597893 - 597865 - G 75 -4.6 -4.83615 | gap 1 GAGGGTGTAGAAAAA CCATC-GTGGAAC ACAA GTTTCACCGACGG GTCACGCACAAAGGG TP0552 598691 - 598158 - | hypothetical protein TERM 654 598271 - 598256 - G 81 -6 -4.82901 | overlap 598257 GCTCCTGCACAAAAA TGGCGC TGTA GCGCCC TGAATGCTGCACACG TERM 655 598270 - 598257 - G 71 -9.5 -3.49419 | overlap 598256 CTCCTGCACAAAAAT GGCGC TGTA GCGCC CTGAATGCTGCACAC TERM 656 599466 - 599481 + G 81 -6.2 -4.82901 | CATGTAGAATCGGTG TTTGTG TATA CACAAA TTTTTGTCAAAAACA TERM 657 599842 - 599856 + G 83 -5.6 -5.05116 | GATTTACGAGCGGGT GGATGC GCG GCACCC TTTTCTTGTTTGTCG TP0553 598935 - 600146 + | hypothetical protein TERM 658 600336 - 600358 + G 74 -11.2 -3.27298 | TTTAGGAGATGGTTC GCGCGCACTG ATT CAGCGCGTGC TTGCTCATTACGGCG TERM 659 600546 - 600563 + G 91 -5.5 -5.40072 | opp_overlap 600531 GCCACATTCTATCGC GCAGAAG GTAG CGTCTGC TTTTTTTGGGGACAA TP0554 600181 - 600849 + | phosphoglycolate phosphatase (gph-2) TP0555 602103 - 600913 - | glutamate/ aspartate transporter, putative TP0556 603318 - 602326 - | asparagine synthetase AsnA TERM 660 602854 - 602842 - G 72 -4.7 -4.66163 | overlap 602829 ATCCGCAGGCAAAAA CGCCC GTA GGCCG AACCTCTCACTTACC TP0557 603423 - 604136 + | hypothetical protein TERM 661 604491 - 604544 + G 75 -11.9 -2.84467 | gap 2, opp_overlap 604480, overlap 604489 604533 GGAACGCACCTGTGT GGGAACCTGCGCTCACTGCAGCGTT ACTTGC GGCGTTGCA-TG-GCGCAGCTTCCC TGCTCTTGCTTTCTG TP0558 604166 - 605074 + | hypothetical protein TP0559 605136 - 606341 + | hypothetical protein TP0560 608379 - 606394 - | transketolase A (tktA) TERM 662 606820 - 606804 - G 74 -5.8 -4.57073 | overlap 606805 CACTTTTCTCAAAAA CCGGCA CGTTC TGCCGA CTCAAAACGATACAC TP0561 609341 - 608490 - | hypothetical protein TERM 663 609269 - 609224 - G 74 -7.7 -4.03234 | gap 2, opp_overlap 609224, overlap 609227 CCTCCTGCACAGAAA GGAGTGCCGCCTCATCTACCA CCGCAC TAG-AGA-GAGGCGGCACCGC ACGGGCACCTAAGCG TERM 664 609649 - 609622 - g 78 -12.7 -2.87132 | GCGGGCGCTCATAGA CGCAGCTGCAG ACGCAG CAGCAGCTGCG GTCAAATTCCAGCTC TP0562 609512 - 610648 + | spore coat polysaccharide biosynthesis protein (spsE) TP0563 610639 - 611052 + | hypothetical protein TERM 665 612287 - 612269 - gT 74 -8 -3.98913 | opp_overlap 612269 CGCATACTTAAAGAA CAGTGCGG TTA CCGCGCCG TTATCCTTCCACCAA TP0565 614187 - 612967 - | hypothetical protein TP0564 611049 - 613085 + | hypothetical protein TERM 666 613258 - 613272 + gT 71 -2.8 -4.7878 | CACCCGCTGCGGATC GTATTG CGC CACTAC TTTCTTTTGTACGTG TP0566 615685 - 614198 - | alginate O-acetylation protein (algI) TP0567 616337 - 615717 - | hypothetical protein TERM 667 616301 - 616289 - G 70 -6.2 -4.24149 | TGAGCAAAAGAATAA GCGC AAGCA GCGC CACTATCTTTGCCAT TP0568 617048 - 616416 - | 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxyphosphogluconate aldolase (eda) TP0569 619494 - 617170 - | aminopeptidase P TERM 668 617215 - 617200 - G 74 -6 -4.57569 | opp_overlap 617206, overlap 617168 617185 617201 GCACGTGCGCAAAAA GGCGCG CGTA CGCGCA TCTAAAAACGGCGCG TERM 669 617602 - 617590 - G 100 -9.1 -5.60993 | opp_overlap 617589 CTCCTCAGAAAAAAA GGGAG GAT CTCCC GTGTGCTCTGCCCCA TERM 670 618982 - 618951 - G 72 -8.6 -3.72642 | overlap 618952 AAGGAACTACGGAAA CGCGATGCTCCTGC GGTA GCAGGAGCGCCCCA TCAAAGTCTAGGCGA TERM 671 619249 - 619237 - G 95 -9.1 -4.83169 | opp_overlap 619247 ATCTGTCCACAAAAA CGCAC GTT GTGCG GTCACCACCACTATT TP0570 620364 - 619519 - | hypothetical protein TERM 672 620378 - 620359 - G 79 -4.9 -4.90778 | overlap 620362 620364 CCTACGCAAAGAAAA CCACACC GCTCTT GGCGCGG CAACGCACACACTCA TP0571 621056 - 620391 - | Tp70 protein TP0572 622156 - 621074 - | hypothetical protein TERM 673 622235 - 622206 - gR 81 -6.5 -4.68511 | gap 1, overlap 622202 CGGAACAGAAACAAA GCGTGTCCACGCTT CAA AAGC-CAAACACGC TTAAGACACACGGGA TP0573 622147 - 622239 + | hypothetical protein TP0574 623570 - 622266 - | carboxypeptidase, 47 kDa TERM 674 623963 - 623975 + H 71 -10.5 -3.18582 | opp_overlap 623959 CCAAGCAGAAATGCT GGCCG ACG CGGCC TTCATAGCTACCGTA TP0576 625802 - 626908 + | peptide chain release factor 2 (prfB) TERM 675 627512 - 627525 + GF 75 -5.2 -4.67353 | opp_overlap 627486, overlap 627490 GTGTGGAAGTGCGCA CCGC ACGCGC GCGG TTTTTCCGTCCCTGG TERM 676 627827 - 627813 - gf 72 -7.1 -4.18494 | opp_overlap 627812 CAGTGCCATTGAAAA CGCAC AACCG GTGCG CATTGTGTTTGACGT TERM 677 627838 - 627862 + GF 70 -7.1 -4.05788 | GTGCGCATTGTGTTT GACGTACATCC TCC GCATGCACGTC TTTCGTTTCAGGGCG TP0577 626800 - 628644 + | hypothetical protein TP0578 628651 - 629538 + | cell division protein (ftsY) TERM 678 629672 - 629662 - g 77 -3.2 -5.04385 | CACAGGCGCAAAAAA CAGA CAC TCCG CTTGATTCCTCCAGC TERM 679 630207 - 630195 - g 73 -4.1 -4.83615 | opp_overlap 630182 GACGTGTTAGAAAAA CGTTA TCG CAACG GCGTATTACAGGCAA TP0579 629535 - 630311 + | hypothetical protein TERM 680 630751 - 630738 - g 73 -3.8 -4.74801 | TAATTTGAGTAAAAA GCAC TCCATT GTGC TCGGATATGAACTGG TERM 681 631065 - 631076 + G 88 -2.2 -5.52986 | AGAATCCTGGCGGGA GTAC AACC GTGC TTTTTTTAGTGCGCT TP0580 630304 - 631593 + | hypothetical protein TP0581 631586 - 632266 + | ABC transporter, ATP-binding protein TERM 682 632442 - 632456 + G 85 -2.9 -5.36441 | AGGAAAACGACGTTC CTTTT TGCGC AAAAG TTTTTTCTGTGCCGC TERM 683 632749 - 632780 + G 100 -2.2 -5.9873 | opp_overlap 632741, overlap 632750 632753 GGAAAAACAGGGCGT GCAGGGGGGAAT ATCCGCGC AGTTCCCCCTGA TTTTTTTTCTAGTGA TERM 684 632799 - 632811 + G 84 -7.7 -4.59773 | TTTTTCTAGTGAGCG TGGAC TTC GTCCA TTTTTAACCGTCGAA TP0582 632263 - 633750 + | hypothetical protein TP0583 633859 - 633734 - | hypothetical protein TERM 685 633798 - 633810 + gF 74 -7.7 -4.07568 | TCCGGCTCGCAGACG GATGG GTA CCATC TTTTAGAAGAGCACG TERM 686 634080 - 634063 - gH 72 -7.7 -3.86897 | overlap 634064 TTGAGTTGCCAGAAA CTTCCCC CTAC GGGGAAA ATGAGAAGCCGATGG TERM 687 634598 - 634577 - gH 70 -9.5 -3.31726 | overlap 634575 GGTTTTGAGAGAAGA CTTCTCTGC CAAC GCAGAAAAG CTGCGGGCTGCAATC TERM 688 635012 - 635028 + GH 78 -6.5 -4.57569 | overlap 634998 635015 GGCGCTCAAGGACGA GCAGCTC TTC GAGCTCC TTTTTAAACACGTAG TP0584 633846 - 635255 + | hypothetical protein TERM 689 636340 - 636355 + G 91 -11.8 -4.07568 | opp_overlap 636337 CATGAATACAATCCT GCGCGC GCAC GCGCGC TTTTAGCAGAAGCGA TP0585 635248 - 636891 + | oligopeptide ABC transporter, periplasmic binding protein (oppA) TERM 690 637034 - 637013 - g 82 -2.1 -5.36441 | opp_overlap 637026 GCTCTAGAGAAAAAA TGGCAGGCC TATT GGCGCGACA AGCGCGTCTTTTGTG TERM 691 637026 - 637042 + G 81 -7.2 -4.60797 | opp_overlap 637013 AATGGCAGGCCTATT GGCGCG ACAAG CGCGTC TTTTGTGTGTCCGAG TERM 692 637750 - 637763 + G 84 -8.1 -4.62336 | opp_overlap 637735 637734 637749 TCGCGTGTACACCAC GCGTG CGGA CACGC TTTTTGGAGTAACGT TERM 693 637930 - 637912 - g 75 -6.7 -4.43477 | gap 1, overlap 637914 TTTAGCGAAGGAAAA GACCGGTG TTTT CACCGG-C GCGTACGTGCGCAAT TERM 694 637929 - 637914 - g 79 -10.4 -3.82321 | overlap 637912 TAGCGAAGGAAAAGA CCGGTG TTTT CACCGG CGCGTACGTGCGCAA TERM 695 638290 - 638251 - g 70 -10.9 -2.74144 | gap 3, opp_overlap 638277, overlap 638250 TGCCCATCTTGAAAT GCGT-GGCG-CAGGTGCACG GCG CGT-CACCTATCGCCTACGC GACTGGGTGTTCAGC TERM 696 638355 - 638390 + G 75 -5.4 -4.63218 | gap 1 TGCACTGTCCTTCCT GCGGTGTTGTACCTCTC CCT GAGAG-TGCGCTGCCGC TTTTGTTACCCGAAA TERM 697 638533 - 638520 - g 74 -8.1 -4.05321 | opp_overlap 638524 GAGAAACAAACACAA TGCCC CAGT GGGCA GGATCCTGCTGGTAT TERM 698 638606 - 638626 + G 77 -9.7 -3.60792 | GCACCCGAGAAGGAG CGTTACTGG GCG CCAGTGGCG TTATATGTAGGTGGT TERM 699 639206 - 639185 - g 77 -6.5 -4.68593 | gap 1, opp_overlap 639185 639181, overlap 639189 CGGACTATTCAAAAA GTGACCGACG ATA CGTCGG-CGC TTAGTTTTAACACGG TERM 700 639203 - 639189 - g 75 -11.4 -2.85361 | opp_overlap 639185 639181, overlap 639185 CTATTCAAAAAGTGA CCGACG ATA CGTCGG CGCTTAGTTTTAACA leuS 636980 - 639616 + | leucyl-tRNA synthetase TP0587 639826 - 639596 - | hypothetical protein TP0588 640617 - 639853 - | hypothetical protein TERM 701 640279 - 640266 - G 74 -2.3 -5.06103 | ACAACTCCCAAAAAA CACGC TTAT GCACG GGAGAAATATTCTGT TERM 702 640353 - 640342 - G 73 -3.6 -4.7871 | AATCAGTACCAAAAA CACG TCAG CGCG CGAGCCGCCATCCTT TP0589 640971 - 640705 - | phosphocarrier protein HPr (ptsH) TP0590 641059 - 640943 - | ribosomal protein L36 (rpmJ-2) TP0591 642005 - 641016 - | HPr kinase/phosphorylase TERM 703 642940 - 642969 + GH 91 -10.7 -4.18018 | gap 1 TCATCCGTTCAGACG GGCGCACCCTCTAC TGG GCAGAGGG-GCGTC TTTTACCTCGAGAAC TERM 704 643293 - 643276 - gH 84 -4.1 -5.23316 | overlap 643260 CAGTACAGGAAAAAA TCCTCAC TGCC GCGAAGA CGCATGCTCACGTAC TERM 705 643509 - 643499 - gH 79 -2.4 -5.252 | overlap 643501 CATCCCCATAAAAAA GCGC TGG GCTC CACCTGCAGAAATCA TERM 706 643991 - 643976 - gH 76 -3.2 -5.00616 | overlap 643977 643989 TTTGCTTTCAAAAAA GCATGC TCAG ACACGC GCGTCTCGCAGAAGC TERM 707 644100 - 644115 + GH 77 -3.2 -5.08824 | opp_overlap 644091, overlap 644093 AAAGAACGAAGCGAT GCGC TGTGGATT GCGC TTTTTTCCGTACGGC TP0592 642738 - 644240 + | hypothetical protein TERM 708 644463 - 644475 + GT 70 -6.2 -4.18164 | TGGGGGTGTTTTTCT GCGC ACCAC GCGC TTCTTTTGCCGAGTT TP0593 644177 - 646210 + | hypothetical protein TERM 709 646262 - 646285 + T 77 -4.6 -4.86001 | gap 1, opp_overlap 646266 ACTCGGAAGCAGGCA CGAACGT-GTG CGC CACCACGTTGG TTTTTATGAGCTCAT TP0594 646905 - 646297 - | hypothetical protein TP0595 647568 - 646933 - | adenylate kinase (adk) TP0596 648704 - 647592 - | polynucleotide adenylyltransferase (pcnB) TERM 710 647928 - 647914 - G 86 -4.2 -5.41746 | AAGCTTGCAAAAAAA GCGCTC TCA AAGCAC GGCACATCCCGCATA TP0597 649090 - 648812 - | hypothetical protein TP0598 650871 - 649054 - | hypothetical protein TERM 711 649947 - 649931 - GR 70 -6.5 -4.1196 | overlap 649933 AATGTATGCGCAAAA CATGCAC TCC GTGCAGG GTACTCGGTGAGCAC TERM 712 650452 - 650477 + gr 73 -11.9 -2.80816 | AGGGGTGATCTGCCA CGTATCCGGTT TATA ATCCGGATACG TGTACTGGGTGAGAA TERM 713 650588 - 650564 - GR 93 -10.6 -4.37092 | opp_overlap 650564 AGCCCCCCTACAAAA CGCGGGCTGA CAGCT CCCGCCCGCG TCACTTCCGCCCCAT TERM 714 650762 - 650772 + gr 75 -4 -4.83615 | TCAGACCGGGCAGAT TCAA GCG TTGA TTTTTGTGAGGGATA TP0599 651564 - 650908 - | hypothetical protein TERM 715 651025 - 651038 + g 82 -8.1 -4.55093 | CACATTCATGGGAAC CGGCA TAAT TGCCG TTTGTTGTTCTCTGA TP0600 652923 - 651571 - | zinc protease, putative TERM 716 652106 - 652120 + g 77 -2.8 -5.055 | opp_overlap 652106, overlap 652104 652103 CCTGAACGCAGCACA GTCAAT ACG ACTGAC TTTTTTCGAAATTCC TP0601 654071 - 652920 - | 1-deoxy-D-xylulose 5-phosphate reductoisomerase TERM 717 653789 - 653774 - G 71 -3.2 -4.74453 | gap 1, overlap 653776 CAAGAGAGGCAAAAA GACCAGC AGC GCCGG-C AATACCGTTTACCAC TERM 718 653927 - 653896 - G 81 -10 -3.91144 | GTGATATCTGATAAA GAGAACTCGCGCGC CAAC GCCCGCGCGTACTC GGTCTGCCGGTGACC TP0602 654910 - 654047 - | phosphatidate cytidylyltransferase (cdsA) TP0603 655593 - 654907 - | hypothetical protein TP0604 656150 - 655599 - | ribosome recycling factor TERM 719 655651 - 655670 + g 82 -7.8 -4.57073 | overlap 655669 TACCGTGCAACGTCT GCGACAGA AGCG TCAGTCGC TTTTTGGAAGGCCTC TERM 720 655805 - 655781 - G 80 -11.3 -3.36749 | TATTGCGAATAGCAA CGCGCGCCTGC TCG GCTAACGCGCG CGCCTGCCTGACAAG tsf 657126 - 656254 - | elongation factor Ts rpsB 658092 - 657217 - | 30S ribosomal protein S2 TP0607 658207 - 658061 - | hypothetical protein TP0608 659347 - 658457 - | hypothetical protein TERM 721 660149 - 660183 + G 75 -4.3 -4.82901 | overlap 660149 660150 TTGCCGCGTGTGCAC G-GGTGCGCAGTGCACT TGC AG-GCGCTGTCCACCGC TTTTTCTCCGAGCGA asnC 659665 - 661236 + | asparaginyl-tRNA synthetase TERM 722 661340 - 661307 - g 77 -7.3 -4.55128 | gap 1, opp_overlap 661311, overlap 661308 ACTCTCAAAGCAAAA TCCGGCGGCGAC-GCA CGC TGCTGTCTCCGTCGGC GGCTGTGCGCTCCTC TERM 723 661339 - 661308 - g 76 -10.8 -3.32354 | gap 1, opp_overlap 661311, overlap 661307 CTCTCAAAGCAAAAT CCGGCGGCGAC-GCA CGC TGCTGTCTCCGTCGG CGGCTGTGCGCTCCT TERM 724 662486 - 662471 - g 81 -4.6 -5.1287 | overlap 662476 TCGATATGGAAAAAA CCAAGG TCAC CCCCGG AGGGCCGGTGGCGTA TERM 725 663213 - 663202 - g 72 -4.4 -4.65895 | TCTCCCATTGAAAAA GTGA CGCT TCAC GCACAGTGGGAGCAG TP0610 661246 - 663327 + | TPR protein H (tprH) TP0611 663469 - 664248 + | ABC transporter, ATP-binding protein TERM 726 665099 - 665087 - g 90 -7.7 -4.94902 | GAAGTACTACAAAAA TGCGT TGC ACGCA GGCGCCGTGGAGCTG TERM 727 665385 - 665362 - g 77 -3 -5.09204 | overlap 665364 ATACTGGAACAAAAA CAGTGCACCT GGGC AGGAACACGG TATCGGAGGTACATG TERM 728 665603 - 665613 + G 85 -3.2 -5.39721 | AATCGGCAGAATCAG TGAC CGC GTCG TTTTTTATCTCATGC TP0612 664329 - 665768 + | hypothetical protein TERM 729 666568 - 666541 - g 84 -4 -5.26875 | overlap 666542 666543 666545 CGTGGAAGGAAAAAA TTCACACGCGCA CATC TGCGCCTGTGGG GTGGTAAAAGACGGT TERM 730 666566 - 666543 - g 71 -11 -2.84518 | overlap 666542 666541 666545 TGGAAGGAAAAAATT CACACGCGCA CATC TGCGCCTGTG GGGTGGTAAAAGACG TERM 731 666683 - 666702 + G 74 -10 -3.48115 | overlap 666681 CTTGACAGAACTGCC GTGGGGGT TAGC ATCCCCAC TATCTTTTGTGACGA TP0613 665795 - 666943 + | hypothetical protein TERM 732 667558 - 667578 + G 70 -4.7 -4.48317 | opp_overlap 667558 CACGGCGTGCCAAAT GTTGCAG ATTTAGG CTGCGAC TTCTTTGTTTTCTCC TERM 733 667658 - 667690 + G 73 -11.3 -2.80791 | opp_overlap 667661 ACACGCTCCTGGAAT CCATGCCTCCTTTTT TGT ATGGGGGAGGCATGG TGGATTTTGTGACTG TP0614 666940 - 668154 + | nitrogen fixation protein (nifS-1) TP0615 668205 - 668648 + | nitrogen fixation protein (nifU) TP0616 668669 - 669433 + | ribose 5-phosphate isomerase (rpiA) TERM 734 669458 - 669435 - T 81 -12.4 -3.53012 | gap 1, overlap 669415 CGGCCTCCTTCTAAA CGGG-GCACGC TGA GCGCGCACCCG CTCAGGTGCGGAAGA TP0617 669738 - 669460 - | hypothetical protein TP0618 670193 - 669834 - | hypothetical protein TP0619 671061 - 670249 - | hypothetical protein TERM 735 670760 - 670789 + g 86 -14.3 -2.93857 | gap 1, opp_overlap 670759, overlap 670756 670787 TCCAGCCCCACCAAC GGTGTCTCCGGCGC ATA GCG-CGGAGGCGCC TGGTTCTCTGTATCT TP0620 672887 - 671058 - | TPR protein I (tprI) TERM 736 672632 - 672670 + g 83 -13.2 -3.00525 | gap 1, overlap 672626 TCAGCTGCAGCTGTG CCCACACCC-CTGAGCG TGCCTC CCCTCGGCGGGTGTGGG TGTGCTTTGACACCA TP0621 675221 - 672945 - | TPR protein J (tprJ) TERM 737 673906 - 673917 + g 72 -4.4 -4.61482 | CTACCCCCGACCGCT TGCA TGTT TGCA TTATTTTTTGCCACA TERM 738 674237 - 674251 + g 73 -11.4 -2.75832 | overlap 674236 674248 TCGCCTGTTGCACTA CCTGGG TTA CCCAGG CTTCCTGTTTTTGAC TERM 739 674248 - 674258 + g 85 -6.8 -4.84529 | overlap 674237 674236 ACTACCTGGGTTACC CAGG CTT CCTG TTTTTGACTTTCTCC TERM 740 674292 - 674319 + g 71 -11.2 -2.94938 | overlap 674294 674313 GAAGAGGTTATTTGA GAGGGCGGTGAG TTCA CTCTGCGCCCTC TGTGTGCGATTTTGA TP0622 677062 - 675281 - | hypothetical protein TERM 741 675549 - 675524 - GH 71 -11.1 -2.85364 | gap 1, overlap 675523 675521 ATAGTACGAAAATAT CGACCGCAGCGT ACC ACGC-GCGGACG CACTCCGAGCTGCAA TERM 742 675694 - 675663 - GH 74 -7.3 -4.1347 | gap 1 GCCGAATGATATAAA CGCCGCGCAAGAGA AATCG CCTCCTGCGC-ACG ACCTGAACCACTGTA TERM 743 676592 - 676578 - Gg 100 -2.1 -5.79526 | gap 1, overlap 676579 ATATCCGAAAAAAAA TCC-GG TTCT CCAGGA ATGAGCGGATACGTA TERM 744 677148 - 677162 + GH 74 -7 -4.29139 | opp_overlap 677138, overlap 677149 ACAACGTACGCATAC CCGGCG CAC CGCCGC TTCTTTTCCCTTTAC TERM 745 677149 - 677161 + GH 74 -10.5 -3.16399 | opp_overlap 677138, overlap 677148 CAACGTACGCATACC CGGCG CAC CGCCG CTTCTTTTCCCTTTA TERM 746 677855 - 677835 - gH 77 -3.3 -5.08824 | gap 1, overlap 677849 GCCGCAGTCAAAAAA CTGCAGTG GAATTA CAC-GCAG CTGCGTGACTGGCCC TP0623 676479 - 678818 + | membrane-bound lytic murein transglycosylase D (dniR) TERM 747 680199 - 680177 - g 72 -7.7 -3.86524 | overlap 680165 ACACGGTGCGACAAA GCCTATCGC GCCAA GCGATACGC ACGCGAACAAAGCCA TP0624 678822 - 680252 + | hypothetical protein TERM 748 680706 - 680666 - g 79 -3.9 -5.14477 | overlap 680657 680668 680669 680671 TATATACTCAAAAAA TATGAGGCTGCAGGCAG CGCACGC CTGCCTCCTGCCTACTA CAAGCTCACACTCAT TP0625 680252 - 681004 + | hypothetical protein TP0626 681001 - 682176 + | exonuclease, putative TERM 749 683184 - 683166 - g 78 -12.4 -2.96695 | overlap 683152 683163 TTGCTCATGAAACGA GCTGCGCA TGT CGCGCAGC AGTCATCCATTGAAG TERM 750 683574 - 683551 - g 72 -5.3 -4.47485 | overlap 683566 AAAAACTTGAGAAAA TACACGCAC AAAAAA GCGCGTATA GCACACGGGCACGTG TERM 751 683584 - 683566 - g 88 -5.2 -5.29782 | overlap 683551 683578 TACACGCACAAAAAA GCGCGTAT AGC ACACGGGC ACGTGAGCAGCTCCT TERM 752 683822 - 683808 - g 74 -8.6 -3.96224 | overlap 683821 GAAACCAGCGAGAAA GATGTG TAC CACATC CTCACCTCTGAGCGT TERM 753 684429 - 684411 - g 81 -8.2 -4.41633 | opp_overlap 684424, overlap 684408 CATGTTCAAAAAGAA TACATGCA CCT TGCACGTA CCGTGTGTTGCGCAC TP0627 682173 - 685316 + | exonuclease (sbcC) TERM 754 685382 - 685397 + G 72 -10.4 -3.41704 | opp_overlap 685381 685382, overlap 685380 685373 685371 TACTTTTTTCACAAG CCGCAC GAGT GTGCGG TGTTTGAAGTATTCT TP0628 685313 - 686794 + | nicotinate phosphoribosyltransferase TERM 755 687030 - 687063 + G 70 -4.5 -4.44667 | gap 1 GGTGGGCACATCGGT GTGTGC-GCAGACGCT GCA AGAGGCTCCCGCACAC TTTCTTCTTGAGGGA TERM 756 687220 - 687206 - g 86 -4.2 -5.42198 | overlap 687207 687209 CTGCAAAAAACAAAA GCACAC CGG GTGTCC CACGCCGTGTCACGC TERM 757 687221 - 687262 + G 85 -2.8 -5.45802 | opp_overlap 687209 687207, overlap 687224 687225 687225 GCACACCGGGTGTCC CACGCCGTGTCACGCGCG CCCTGC CGCGCGTCAAACCGGATG TTTTTGTTTTCGGGA TP0629 686965 - 687789 + | hypothetical protein TERM 758 688849 - 688834 - g 71 -3.2 -4.82901 | CCTGTGCCAGAAAAA CGATGA AGGG TCAGCG CATGAATGCCACGCG TP0630 687959 - 688870 + | chemotaxis protein methyltransferase (cheR) TERM 759 689948 - 689962 + G 88 -11.4 -3.85698 | GGGAAGGGACGGTGC CGCGCA GCT TGCGCG TTTATACACAGAAGG TP0631 688917 - 690128 + | protein-glutamate methylesterase (cheB) TERM 760 690914 - 690867 - g 77 -11.3 -3.14693 | gap 1, overlap 690865 690863 690901 CGGACGATGAAGAGA CGGTGCGGCGCAAGGTCCGTGC GATGT ACACAGATCCTGCGC-GCACCC GGGCAGATATACCAG TP0632 690233 - 691246 + | tryptophanyl-tRNA synthetase TP0633 691387 - 692262 + | bifunctional methionine sulfoxide reductase B/A protein TP0634 692381 - 694852 + | DNA ligase (lig) TP0636 695657 - 694887 - | hypothetical protein TERM 761 695674 - 695689 + r 91 -7.6 -5.00616 | CCCTATGGAGCGGTG CGATGA GCGA TCATCG TTTTTTCACCGGAGA miaA 696645 - 695695 - | tRNA delta(2)-isopentenylpyrophosphate transferase TERM 762 696787 - 696771 - R 74 -2.1 -5.00616 | opp_overlap 696778, overlap 696773 696775 696776 TTCTTGCTTAAAAAA CACACGC GGG GCACGAG ACACCGCCTGACCCC TP0638 697303 - 696869 - | hypothetical protein TERM 763 697232 - 697215 - G 70 -9.9 -3.14229 | opp_overlap 697222, overlap 697213 ACACCCGCATCAACA TGCACGA GGTC TCGTGCA CCACTTGCAAGCAAG TERM 764 697555 - 697539 - H 71 -11.5 -2.92668 | overlap 697534 TACCACTGAACTACA CCCACCG CTC CGGCGGG AGCCTAGTGCAAAGT TERM 765 698048 - 698063 + G 81 -6.8 -4.71426 | gap 1, overlap 698047 CGCTTCTCCATTATC GCG-CGC TGT GCGCCGC TTTTATTCGTGGAGA TERM 766 698657 - 698676 + G 85 -7.1 -4.8543 | overlap 698658 GGTCACTGAGCTCCC TGCGCGA CAAAGA TCGCGCG TTTTTCTCCCGCTTC TP0639 697723 - 699687 + | methyl-accepting chemotaxis protein (mcp2-2) TERM 767 699950 - 699968 + G 72 -8.1 -3.89346 | opp_overlap 699949 699945 ACATCAAAACGATAG CGCAGCT GCAGA GGCTGCG TTTCTGCGGTACACG TP0640 699711 - 701555 + | methyl-accepting chemotaxis protein (mcp2-3) hisS 702901 - 701573 - | histidyl-tRNA synthetase TERM 768 702618 - 702606 - G 70 -4.7 -4.52214 | overlap 702600 702607 702608 AAAGGAAAATACAAA CGCGC ATA GTGCG TTGCAACGAACCGCG TERM 769 703150 - 703164 + G 75 -5.6 -4.59511 | opp_overlap 703152, overlap 703152 CAGAATAATATAGCA GAGCTC GAA GAGCGC TTTTTGCAAACTCTT TERM 770 703302 - 703289 - g 73 -3.9 -4.7497 | TCTATTTACTAAAAA CTTTT CCTG AAAAG GCAGCGCGCGGCGCG TERM 771 703321 - 703302 - g 83 -10 -4.08064 | gap 1, opp_overlap 703311, overlap 703303 703306 AACTTTTCCTGAAAA GGCAGCGCG CGG CGCGCT-CC GTGCCGTTATAGCCT TERM 772 703318 - 703306 - g 70 -10.5 -2.74605 | opp_overlap 703311, overlap 703302 703303 TTTCCTGAAAAGGCA GCGCG CGG CGCGC TCCGTGCCGTTATAG TERM 773 703311 - 703327 + G 80 -11.5 -3.32963 | opp_overlap 703306 703302 703303 TGAAAAGGCAGCGCG CGGCGCG CTC CGTGCCG TTATAGCCTACGACT TERM 774 704011 - 704001 - g 72 -6.8 -4.2461 | opp_overlap 704001 ATGTGCAGTAAGAAA CACC CGC GGTG TGTTGCAGTTGCTCA TERM 775 704584 - 704599 + G 72 -4.6 -4.72007 | overlap 704586 AGTCCAGAAAATCCT GCGCAG ACAT CTGCCC TTTCTTTTCCTCAGA TP0642 703042 - 704802 + | phosphomannomutase (manB) TP0643 704799 - 705446 + | DNA polymerase III, subunit epsilon (dnaQ) lysK 707029 - 705443 - | lysyl-tRNA synthetase TERM 776 705625 - 705599 - G 74 -10.2 -3.52192 | GGCAACCGCATACAA CTCAGCAGAAAG TTC CTTTTCGCTGAG TACGTCAGTGCGTGG TERM 777 706229 - 706216 - G 73 -3.7 -4.80487 | CATAACGAAAAGAAA CAGGC GCAG GCCAG TGATAAATGTGATCA TP0645 707236 - 707060 - | hypothetical protein TP0646 708617 - 707295 - | hypothetical protein TERM 778 707388 - 707378 - GR 74 -6.8 -4.22554 | GCACTGAAGAAAGAA TCCC TGT GGGA GAAAAATGAAACACA TP0647 709809 - 708529 - | seryl-tRNA synthetase TP0648 711907 - 709859 - | hypothetical protein TERM 779 711266 - 711255 - GR 90 -4.4 -5.41143 | opp_overlap 711255 TACGCGGCAAAAAAA TGCA CCTG TGCA TTATCACCGTGATAT TP0649 712649 - 711852 - | hemolysin (tlyC) TERM 780 711971 - 711955 - GR 75 -4.3 -4.77165 | overlap 711957 TCTTGGATAATAAAA TCGAAGG CAC CCCACGA AACCTTCTCGTACTT TERM 781 711976 - 711994 + gr 87 -8.2 -4.56775 | opp_overlap 711957 711975 GCACCCCACGAAACC TTCTCGTA CTT TACGGGAA TTTTTCCAAAAAGAT TERM 782 712515 - 712498 - GR 70 -3.3 -4.6971 | opp_overlap 712499, overlap 712499 712510 GAAAGCTCAAGAAAA TCCACGT CAAT ACGCGGT ATCATCACCTCGCGC TERM 783 712560 - 712575 + gr 73 -4 -4.78572 | gap 1, opp_overlap 712547, overlap 712562 AAGATCCACTATACC GC-GGAT CAT ATCCTGC TTTTCTTCATTCAGC TP0650 713119 - 712637 - | putative metalloprotease TP0651 715536 - 713125 - | hypothetical protein TP0652 715712 - 716851 + | spermidine/putrescine ABC transporter, ATP-binding protein (potA) TERM 784 716965 - 716976 + G 74 -5.8 -4.56597 | CCCCTTACGGTGGTC GCTG TGTA CAGC TTTTTGCAAAAGGGC TERM 785 717222 - 717252 + G 74 -6 -4.56597 | opp_overlap 717222, overlap 717236 717237 TCTCATCAGGATAAA CGCCTGGATCACTA TCC TGGGGAACCAGGGG TTTTTGAACGAAGCA TERM 786 717269 - 717281 + G 70 -4.1 -4.71426 | overlap 717270 TTTTGAACGAAGCAC TCAAG TCG CTTGG TTTTATTACTCGAAG TP0653 716848 - 717747 + | spermidine/putrescine ABC transporter, permease protein (potB) TERM 787 718324 - 718342 + G 100 -11 -5.00138 | opp_overlap 718307, overlap 718311 718307 GATCCCTGCCATCAT GCCAGGCA TAC TGTCTGGC TTTTTACTTTCAGTA TP0654 717740 - 718558 + | spermidine/putrescine ABC transporter, permease protein (potC) TP0655 718594 - 719640 + | spermidine/putrescine ABC transporter, periplasmic binding protein (potD) TP0656 719609 - 719710 + | hypothetical protein TP0657 719916 - 719695 - | carbon storage regulator (csrA) TP0658 720362 - 719910 - | flagellar assembly protein FliW TERM 788 719999 - 720009 + g 87 -4.6 -5.29445 | CCATCGCCACTTGCA TCGC CTT GCGG TTTTTCTTGTTCACA TP0659 721631 - 720381 - | flagellar hook-associated protein FlgL TERM 789 720699 - 720677 - G 73 -12 -2.72661 | GATCACCTGCAAGCA GGGCATTGCG CAC CGCAATGGCC ATGTCAAAAATGGAC TERM 790 720804 - 720783 - G 89 -13.1 -3.33399 | opp_overlap 720780, overlap 720778 GGTAATCAAACCCAA CGAGGCAAA CACG TTTGCCTCG TCCTCATCTTGCAAC TERM 791 721598 - 721584 - G 90 -7.1 -5.06414 | CTCCCTTAAGAAAAA GGCAC TGTCT GTGCC CTGCATGTGTGAGCT flgK 723542 - 721665 - | flagellar hook-associated protein FlgK TERM 792 721734 - 721723 - G 70 -3.6 -4.63486 | ACCGCCGCAATAAAA CGCG CAGA CGCA TTATAGCCGTGCTGA TERM 793 721917 - 721905 - G 74 -3.3 -5.0133 | CACTTCTGCAAAAAA CTCGT CAA ACGTG TGTCGATTGCCAATC TP0661 724160 - 723648 - | hypothetical protein TERM 794 724266 - 724229 - R 100 -16.3 -5.65927 | TAGTGAAATAAAAAA CCGTCCAGTGGTCTGCA GCTC CGCAGGCTACTGGACGG CTCGCACCTGCTGGC TP0662 725281 - 724283 - | fructose-bisphosphate aldolase TERM 795 725580 - 725595 + G 73 -3.9 -4.8048 | overlap 725581 TATGGTGGCGGGCTT TGCGC TGACGT GCGCG TTTTTGGTGTCCCCC TP0663 725548 - 726276 + | outer membrane protein, putative TP0664 726273 - 726998 + | flagellar filament outer layer protein (flaA-2) TP0665 727771 - 727016 - | hypothetical protein TP0666 728061 - 727768 - | hypothetical protein TP0667 729772 - 728105 - | uridine kinase (udk) TERM 796 728833 - 728851 + g 85 -3.1 -5.44721 | opp_overlap 728833 GATCGTAACCAAGTA CTTGCAG CTGCA CTGAAAG TTTTTTTGCAATCGT TP0668 730611 - 730003 - | hypothetical protein TERM 797 730230 - 730207 - G 85 -6.8 -4.74611 | CATCACAAAAAATAA CGTATGAACA TTTA CATTCATACG ATCGGAAACAAATCG dnaE 734120 - 730608 - | DNA polymerase III subunit alpha TERM 798 730841 - 730873 + g 85 -8.6 -4.57353 | gap 2 TCACCTCGATGTGCA CTTC-CTGC-GAAACG CCA CGTTTCTGCAGTGGAG TTTTCTCTCCTGACG TERM 799 734207 - 734217 + r 81 -6.8 -4.72272 | ATATATTTTTATCCA CCCT TGC AGGG TTTTTGCTCGCAGCG TP0670 735464 - 734274 - | D-alanine--D-alanine ligase (ddlA) TERM 800 735025 - 735014 - G 72 -7.2 -4.26792 | AGACAAACGGTAAAA CGGG AAGT CCCG CCGCCTGCCATAGCA TP0671 736500 - 735466 - | sn-1,2-diacylglycerol cholinephosphotransferase, putative TERM 801 735936 - 735913 - G 73 -3.7 -4.86226 | opp_overlap 735913, overlap 735915 ACAGGAAAAAAACAA CGGCGTGAG GAACAG CGCACGCAG TGTTTCGAACGACCC TERM 802 736118 - 736093 - G 81 -6.9 -4.67651 | gap 1, overlap 736094 736095 736112 ACACGTCAAAAGAAA TGGCTCGCGTAT ACG AAACGCGAGC-A CGAAAATTCCTGCCA TERM 803 736117 - 736095 - G 73 -12 -2.62981 | overlap 736093 736094 736112 ACGTCAAAAGAAATG GCTCGCGTAT ACG AAACGCGAGC ACGAAAATTCCTGCC TP0672 737919 - 736531 - | glycyl-tRNA synthetase gltX 739667 - 738054 - | glutamyl-tRNA synthetase TERM 804 738423 - 738400 - G 91 -5.2 -5.40072 | opp_overlap 738416 GGTTCTTGAAAAAAA CAACGCACCA ACTC CGGCGCATCG GTTAGAAACCGCAAC TERM 805 738996 - 738980 - G 70 -7.3 -4.09685 | overlap 738982 CCTGAGCGCGCAAAA CATGCGT AAT ACGCATA GCATGGTCATCTACC TERM 806 739526 - 739512 - G 82 -11.4 -3.53343 | opp_overlap 739514 AAGGTTCTGCTCAAA CGCTGC AGT GCAGCG ACTGCGGTCAGTATC TERM 807 739982 - 740004 + G 75 -11.3 -3.09516 | gap 1, overlap 739985 GCGAAGTGCGACTGT GCGCG-CACG GCGC CGTGGCGCGC TTCCGTCCTCGCAGG TERM 808 739985 - 740037 + G 100 -14 -3.68351 | gap 1, overlap 739982 AAGTGCGACTGTGCG CGCACGGCGCCGTGGCGCGCTTCCG TCCT CGCAGGC-TGCCGCTGCGCCGCGTG TTTCCCTGATGGAAG TERM 809 740166 - 740188 + G 73 -9 -3.57792 | opp_overlap 740163 740162 740158 GGAAGGAGGAAGCTG CGCACCGCAG TCC CTGAGGCGCG TTTAGACCTCCATGG TP0674 739845 - 740453 + | hypothetical protein TERM 810 740866 - 740854 - g 70 -5.5 -4.30576 | GCTTGAGCAGGAAAA CGCTG CTC CAACG CTCTCTTCCCTTTCT TERM 811 741169 - 741159 - g 70 -6.8 -4.07568 | opp_overlap 741148 741159 TCGCTCTCGGGAAAA GTCC CGC GGAC TTTAAGGGCAGGCTC TP0675 740459 - 741457 + | hypothetical protein TP0676 741747 - 741469 - | hypothetical protein TP0677 742377 - 741769 - | hypothetical protein TERM 812 742277 - 742230 - G 74 -11.2 -3.12999 | gap 1 GCATCCCACAGTCAA CGCAGGCGTGCACCTGGCGCGCA AGC TGC-CGCGCGACGTACGCCTGCA CCACCCCGCTTCCTG TERM 813 742668 - 742690 + G 82 -9 -4.23758 | TTATTCGCAGGTTTG GACGCGTGCG GCG TGCGCGCGGC TTTTACCTATACACT TERM 814 742913 - 742935 + G 81 -8.4 -4.4017 | TACGCACATGCCGAA CGCGCGCA GGAAGTG TGTGCGCG TTTTCTCAACCTTGC TERM 815 743086 - 743108 + G 71 -9.1 -3.46534 | gap 1, overlap 743084 TGCCCACTGTGCCGC GCGCG-CCCC TGCG GGGGACGTGC TCTTTGCTCCGATTG TERM 816 743295 - 743267 - g 100 -11 -5.24989 | gap 1 CCACACACGAAAAAA CGGCGCA-GAGGT CTGA ACCGCGTGCGCCG CGCACAAAAATGCGC TERM 817 743334 - 743306 - g 90 -7.4 -4.82901 | CGCCGCGCACAAAAA TGCGCGCGGC AAGAGCGCG ACCGCGCACA GCTTATAACGCTTAT TP0678 742631 - 743554 + | hypothetical protein TP0679 743551 - 743868 + | hypothetical protein TP0680 744967 - 743909 - | O-sialoglycoprotein endopeptidase TERM 818 744398 - 744384 - G 95 -12.8 -4.20696 | opp_overlap 744378 744377 TGAGGAAGCGGAAAA CGCGCG GCA CGCGCG TCACCCTGTTCTGCT TP0681 746091 - 745018 - | alanine racemase (alr) TP0682 746782 - 746180 - | cell division protein (ftsJ) TERM 819 746738 - 746718 - G 70 -10.4 -3.16743 | gap 1, opp_overlap 746714 746719 746733 AATTTATACACCGAA CGCGCGCGG TACC CCGCG-GCG GCTGCCTTTTTTGCC TERM 820 747346 - 747367 + G 79 -2.2 -5.24129 | gap 1, opp_overlap 747346 747349, overlap 747350 GACACGCTCAGCATA GAACCTGCC CTTAA GGC-GGCTC TTTTTTCTGCCACGA TP0683 746875 - 747969 + | octaprenyl-diphosphate synthase TP0684 748262 - 749473 + | methylgalactoside ABC transporter, periplasmic galactose-binding protein (mglB-2) TERM 821 750719 - 750705 - g 95 -7.1 -5.27938 | ACTCTCAAAGAAAAA GCTGC AGGAG GCAGC GGAGCGGGAAATAAA TP0685 749593 - 751083 + | methylgalactoside ABC transporter, ATP binding protein (mglA) TP0686 751098 - 752693 + | methylgalactoside ABC transporter, permease protein (mglC) TP0687 754881 - 752821 - | DNA recombinase (recG) TERM 822 754249 - 754231 - G 100 -3.2 -5.80817 | overlap 754223 TTGAAGAGAAAAAAA TTCTTCAA ATA TCAAAGAA TGTTTTCCCTTCGCA TP0688 755950 - 754937 - | immunity protein (mccF) TERM 823 755951 - 755966 + r 70 -3.2 -4.72333 | TCCTTCATCTTGCAT CTATCG CTTC CGACAG TTTTTCCGTATGGTT engA 757333 - 755951 - | GTP-binding protein EngA TERM 824 757106 - 757096 - G 95 -6.8 -5.24129 | opp_overlap 757095 TTTTTTCAGAAAAAA CGGT AAA ACCG CTCGTGTCAACAAGT TP0690 757950 - 757369 - | hypothetical protein TERM 825 757426 - 757411 - G 93 -6.2 -5.27335 | opp_overlap 757411 CTCTTTAAATAAAAA TTGGAA TAGT TTCCAA TTCTCCTGCTCTTTC TERM 826 757463 - 757474 + g 74 -5.8 -4.51799 | opp_overlap 757463 GTGACTTCTATGATA CGAG AATC CTCG TTTTCTACATTTAAT TP0691 758701 - 757943 - | hypothetical protein TERM 827 758024 - 758012 - G 71 -2 -5.01732 | AATCGGGCCAAAAAA TTCA GGCTG TGAA ATATGCACAAGATGC TERM 828 758296 - 758306 + g 77 -3.2 -5.08824 | CTGGAGACAAAAACA GATG CTG CGTC TTTTTTCGCTCAACG TERM 829 758524 - 758507 - G 70 -7 -4.09864 | AGCCATTGCGTAAAA CTCCGT CAGACC ACGGAG ATCGGGCGAGACGGT TP0692 759952 - 758729 - | recA protein (recA) TERM 830 759151 - 759111 - G 95 -9.2 -4.97402 | gap 2 GAAAAGGCAGAAAAA CCCTTCC-CAAAG-AGAATC TCC GTTTCTACCTTGCGGAAGGG GGGTGCCATCTTATT TERM 831 759991 - 759973 - R 81 -6.6 -4.72272 | overlap 759974 GCCTCCCATGAAAAA CCCCGCGC AAG GCGCAAGA GACGCGCTACCACCT TP0693 761535 - 760213 - | hypothetical protein TERM 832 760581 - 760560 - G 77 -8.6 -4.09864 | opp_overlap 760575 ACCGACGCTTCAAAA GCCCCCCG AGCAAA CGGGTGGC CGTCAGATTCTCGTG TERM 833 761227 - 761211 - G 78 -12.3 -2.87132 | TGTCCCCCGTACAGA GCGCATC CGT GATGCGC ATACCCTCTTCTGTG TERM 834 761418 - 761403 - G 72 -7.6 -3.99324 | CCGCAGCATGAGAAA CATGCT CAGA AGCATG GGCCACACCCGAAGA TP0694 761695 - 762372 + | 5,10-methenyltetrahydrofolate synthetase, putative TERM 835 762628 - 762663 + G 70 -10.3 -3.1332 | gap 1 GATAGCGCCGCGCTC GTCGCTCACGCGCGCG CAATT CGCGCGCGMC-GCGGC TTGGATGCTGTGTTC TERM 836 763921 - 763867 - g 81 -7.2 -4.71426 | gap 1, opp_overlap 763879 763892 763894 TTTCTAGCAAGAAAA CGCAGCGCAGAATCAGCGGCCAG CCCAGCGCTC CAGGACGCTGATTCTGAG-TACG CAGCGTCTGCATCAC TP0695 762460 - 764253 + | phosphoribosylglycinamide formyltransferase, putative TP0696 765077 - 764241 - | nicotinamidase, putative TERM 837 764567 - 764534 - G 77 -3.2 -5.06816 | AGCGCTTAACAAAAA GAGAATCC-GCAGTCC CTTG AGAC-GCTGGATACTC CGAGGACAGCACACT TERM 838 765105 - 765084 - R 72 -11.5 -3.12351 | overlap 765097 TCTGCTCATAGGGAA GCGCGCGCA GGAA CGCGCACGC GCGTGCGCGCATACC TERM 839 765114 - 765097 - R 81 -12.7 -3.14463 | overlap 765084 AAGCGCGCGCAGGAA CGCGCAC GCGC GTGCGCG CATACCCCACCCCAG TP0697 765747 - 765139 - | hypothetical protein TERM 840 765678 - 765657 - G 82 -2.2 -5.38054 | gap 1, overlap 765658 GGGGAGAAACAAAAA CCTG-CGCG GCGTT CGCGTCAGT GCAAAGACCCCACAA TP0698 766323 - 765778 - | hypothetical protein TP0699 766430 - 766320 - | hypothetical protein TP0700 766828 - 766436 - | hypothetical protein TERM 841 766556 - 766540 - G 100 -7.9 -5.24129 | opp_overlap 766538 766545 GCTTCTGAGAAAAAA GCTCTGC GGC GCGGAGC AGTGTCTCCTGCCGC TP0701 767169 - 766966 - | DNA-directed RNA polymerase, putative TP0702 767875 - 767339 - | hypothetical protein TP0703 768570 - 767890 - | hypothetical protein TERM 842 768307 - 768293 - G 82 -2.1 -5.33405 | gap 1 GCCACTAAAGAAAAA GTG-GC CATC GCACAC GCACCTTGGGATACC TP0704 770690 - 768570 - | single-stranded-DNA-specific exonuclease (recJ) TERM 843 769393 - 769383 - G 75 -5.4 -4.72272 | opp_overlap 769392, overlap 769386 TTCGCGCATTAAAAA CAGT TCC ACTG CACGGTGCGGACACC TERM 844 769804 - 769785 - G 95 -9.2 -5.02476 | overlap 769786 ACATTGGGGAAAAAA CGCGGCCA TACG CGGCCGCA CATCGGTAAAACGCC TERM 845 769803 - 769786 - G 81 -10.5 -3.60762 | overlap 769785 CATTGGGGAAAAAAC GCGGCCA TACG CGGCCGC ACATCGGTAAAACGC TERM 846 769905 - 769886 - G 81 -8.6 -4.35116 | CATCCCATACGAAAA CTTCCTGA CCCT CCAGGAAG GCACCAAGACGCGTA TERM 847 770580 - 770564 - G 77 -3 -5.0925 | gap 1, overlap 770567 GCTCAAAATGAAAAA GGAGTGC GTCA GCA-TCC ACTACCTTGCGACGC TP0705 773487 - 770833 - | penicillin-binding protein (pbp-2) TERM 848 770864 - 770884 + g 74 -11.1 -3.25896 | opp_overlap 770864, overlap 770862 AGACTCTGCACACCA CGAGCAGGA TCG TCCTGCACG TCTTCTGACTCCTCC TERM 849 770985 - 770961 - G 84 -7.7 -4.72272 | opp_overlap 770946, overlap 770962 GCGGCGCATCAAAAA GCGGCGCTTCC TGC GGATGCACCGG CGCAAAAGGATTGCT TERM 850 770984 - 770962 - G 78 -11.2 -3.43042 | opp_overlap 770946, overlap 770961 CGGCGCATCAAAAAG CGGCGCTTCC TGC GGATGCACCG GCGCAAAAGGATTGC TERM 851 771195 - 771184 - G 70 -3.6 -4.71828 | overlap 771185 771186 ATGGTACGAACAAAA GCGC TCAG GCAC CGTGCCAGGCAAAAA TERM 852 772378 - 772394 + g 71 -2.9 -4.7629 | overlap 772380 GGGACTGAGCGTACT GCGGT AATACGC GCCGC TTTTTGCCTTCATGC TERM 853 772912 - 772891 - G 88 -11.5 -3.71308 | opp_overlap 772893, overlap 772887 AAGCAAAATAACCAA GAGCGCCGC CTCT GCTGCGCTC ATCTGACGTACCGAA TERM 854 772959 - 772936 - G 93 -13.2 -3.61268 | overlap 772943 TACCGAATGGCCAAA GTAGAAGCGG GCAG CCGCTCCTAC GCCGTAGGTGCCGCC TERM 855 773610 - 773589 - R 100 -12.3 -5.07275 | GCAGACACACAAAAA GGCCGGCTT TCTC AAACCGGCC CCACTACGTACCGAC TP0706 774710 - 773784 - | hypothetical protein TERM 856 774024 - 774005 - G 71 -10.8 -2.87931 | overlap 774007 CGTACTTGCCATACA GACGATTG TACG CAATCGTC GCCACCTGTCCGCTC TERM 857 774104 - 774118 + g 78 -8.5 -4.18018 | opp_overlap 774101 GATGATAACTCAGCC GCCCG GTGAA CGGGC TTTTGCGTGCGCCAA TP0707 775251 - 774772 - | hypothetical protein TERM 858 775379 - 775400 + G 83 -6.5 -4.91712 | opp_overlap 775374, overlap 775382 775383 CTTGAAGGTACCTGC GATTGCAGC TGGC GCTGCGTTC TTTTTATCCATTGCA TERM 859 775382 - 775397 + G 77 -6.8 -4.55383 | opp_overlap 775374, overlap 775379 775383 GAAGGTACCTGCGAT TGCAGC TGGC GCTGCG TTCTTTTTATCCATT TP0708 775317 - 775832 + | hypothetical protein TP0709 775888 - 776676 + | RNA polymerase sigma factor WhiG TERM 860 776903 - 776891 - g 85 -3.3 -5.40072 | CTTCCGCCAAAAAAA GTGGA AAA TCCGC GCCTACGAGAGCTCT TERM 861 777057 - 777030 - g 76 -4.2 -5.02074 | gap 1, overlap 777033 777049 777052 777053 GTACTTTGCAAAAAA GAG-GGCGTTTTT TTA AAAATCACCGCTC CCCTCGGTAAAGGGC TERM 862 777819 - 777799 - g 85 -8.3 -4.56775 | opp_overlap 777786 777802, overlap 777802 ACGTCTCTGTAAAAA CAGGGAACA TTA TGTTCCTTG GTACCGTGTTGGTAC TP0710 776685 - 778655 + | hypothetical protein TP0711 778692 - 779264 + | hypothetical protein TP0712 780193 - 779279 - | ATP-binding protein (ylxH-1) TP0713 781478 - 780165 - | flagellar-associated GTP-binding protein (flhF) TERM 863 780889 - 780899 + gr 73 -5.4 -4.57073 | ATCCATCGCAGGACT GTTG ATT CAAC TTTTTCGAAAGACTC TERM 864 781020 - 781001 - GR 70 -5.8 -4.17048 | gap 1, overlap 781002 TTTCCTCTAAAAGAA GTTCGATTC TTT GAATCG-AC TGCAACTCCTGTGCT TERM 865 781342 - 781331 - GR 100 -4.4 -6.30182 | TGACAGAAAAAAAAA TCTC TACC GAGA CTCGTTCTATGAGAC flhA 783636 - 781513 - | flagellar biosynthesis protein FlhA TERM 866 781733 - 781722 - G 86 -5.8 -5.06414 | GTGTGGGAACAAAAA CGGT GCGG ACCG CTTGCAGAACTTGTC TERM 867 782880 - 782867 - G 71 -3.1 -4.79352 | overlap 782868 782869 CGAGTGACAATAAAA CCTGT TGCA ACAGA CAACAACAAAGAAGG TERM 868 783474 - 783455 - G 77 -2.9 -5.14985 | opp_overlap 783447, overlap 783447 783449 783457 GGAAATACAGAAAAA TCTGTTG GTTTTT CAACAAA TAACACCATAAGTAA TERM 869 783634 - 783616 - G 70 -3.7 -4.68593 | GTCAGTAGTGAAAAA GGCACTC TTACC GTGCGCC ATAGTATGGGTTACC flhB 784775 - 783645 - | flagellar biosynthesis protein FlhB TERM 870 783736 - 783773 + g 79 -4.8 -4.94168 | gap 1, opp_overlap 783746, overlap 783743 TAGGGAACTTCTCTC CCGATAGCAACCTGCGT GTACA ACGCACGT-GCAAGCGG TTTGTTTTCTTCTAT TERM 871 783743 - 783777 + g 71 -2.8 -4.84311 | opp_overlap 783746, overlap 783736 CTTCTCTCCCGATAG CAACCTGCGTGTAC AACGCAC GTGCAAGCGGTTTG TTTTCTTCTATCAAG TERM 872 784002 - 784022 + g 70 -6.1 -4.24326 | AACATAACTTCTCAC GAGCGGG TCCCCTT CCTGCTC TTTTAACTCCTCTTT TERM 873 784507 - 784488 - G 100 -12.2 -5.59879 | CACAAATACAAAAAA CCATCCAG TATT CTGGATGG ACGCGGTAGTAGCAC TP0716 785569 - 784772 - | flagellar biosynthetic protein (fliR) TERM 874 785131 - 785143 + g 81 -6.3 -4.86731 | opp_overlap 785131 785129, overlap 785120 CGCCTCCTAAAAACA GGATT TGA AATCC TTTTATTTGCAAAAA TP0717 785866 - 785582 - | flagellar biosynthetic protein (fliQ) fliP 786700 - 785885 - | flagellar biosynthesis protein FliP TERM 875 786687 - 786665 - G 93 -8.3 -4.84274 | overlap 786667 CAATGACACGAAAAA GAGCGCGCG GCGTA CGCACGCAC GAGCACGGATCACAA TERM 876 786685 - 786667 - G 81 -9.5 -4.02905 | overlap 786665 ATGACACGAAAAAGA GCGCGCG GCGTA CGCACGC ACGAGCACGGATCAC TP0719 787485 - 786697 - | hypothetical protein TERM 877 787004 - 786967 - GR 76 -7.6 -4.1891 | CGCTGCCAATACAAA GGCGCGCTCTGCAAGT CCTACC ACGTACACTGCGCGCC CTGGCGCAATGGGCA TERM 878 787089 - 787070 - GR 77 -12.2 -2.82776 | overlap 787062 787067 CTAGAAAGAAACGCA CTGCGTCT GATA AGACGCAG AAACCCGTATACAGC TP0720 788467 - 787421 - | flagellar motor switch protein (fliY) TERM 879 787931 - 787915 - GR 74 -4.3 -4.70659 | overlap 787917 CCGTATAGGTAAAAA CGCACAG ACG CTGCGGG GGAAAGCGAACCATC TERM 880 788398 - 788376 - GR 78 -9 -3.89346 | CCCCCACCGGAGAAA GACGCGCCCG CAG CGGGGGAGTC GCCGGCTCCCATCTC fliM 789494 - 788460 - | flagellar motor switch protein FliM fliL 790064 - 789516 - | flagellar basal body-associated protein FliL TP0723 790177 - 790043 - | hypothetical protein motB 790890 - 790174 - | flagellar motor protein MotB TERM 881 790467 - 790453 - G 76 -4.2 -5.01497 | overlap 790454 ATGATCAGACAAAAA CTGCGC AAC ACGCAA CAACGCCTCCCGAGA TERM 882 790571 - 790583 + g 72 -6.3 -4.34402 | TCATCACTGGTCACC GCAAT CTT ATTGC TTTTAATCTCAGGAG TP0725 791675 - 790896 - | flagellar motor rotation protein (motA) TP0726 791888 - 791691 - | flagellar protein (flbD) flgE 793337 - 791946 - | flagellar hook protein FlgE flgD 793869 - 793408 - | flagellar basal body rod modification protein TERM 883 793664 - 793648 - G 76 -8 -4.2828 | opp_overlap 793660 CTCGAGCGAGGAAAA TTGCGC CATTT GCGCAA TAAACTGCGTGTCCT TP0729 795588 - 793945 - | hypothetical protein TERM 884 795657 - 795646 - gH 79 -2.2 -5.24531 | opp_overlap 795650 ACGTCTTAGAAAAAA GACC TGCC AGTC CGGTTCGGACGCATC TP0730 795557 - 796654 + | hypothetical protein TERM 885 796834 - 796818 - g 100 -13.7 -3.6682 | opp_overlap 796812 796820 796821 TGGGAGGTACGGAAA CGGCACG AGG CGTGCCG CCTGCGCGTTTTTCA TERM 886 796821 - 796842 + G 77 -6.5 -4.62069 | gap 1, opp_overlap 796818, overlap 796812 796820 GAGGTACGGAAACGG CACG-AGGCG TGC CGCCTGCGCG TTTTTCACGTGCAAG TP0731 796674 - 797384 + | hypothetical protein TP0732 798296 - 797349 - | methylenetetrahydrofolate dehydrogenase (folD) TERM 887 797656 - 797634 - G 72 -8.3 -3.85698 | opp_overlap 797635, overlap 797615 797635 GCCGGTGCGCACAAA CGGCGCGCC AATGA AGCGCGCCT TTCCCAGTGCTGCAA TERM 888 797635 - 797655 + g 81 -11.1 -3.58343 | opp_overlap 797615 797634 797635 CCGGTGCGCACAAAC GGCGCGC CAATGAA GCGCGCC TTTCCCAGTGCTGCA TERM 889 797655 - 797635 - G 75 -11.8 -2.91276 | opp_overlap 797635, overlap 797615 797634 CCGGTGCGCACAAAC GGCGCGCC AATGA AGCGCGCC TTTCCCAGTGCTGCA TERM 890 797880 - 797861 - G 72 -10 -3.37464 | GGAGCAAGTGCACAA TCCCCGCA GGGG TGCAGGGA ACAAACCCAGGCTGC TERM 891 798247 - 798266 + g 85 -10 -4.22214 | opp_overlap 798244 CGCGTTGCAAGACGC GCCGTACA CTCG TGTGCGGC TTGTTTTCCATCGAT TERM 892 798677 - 798688 + G 72 -5.8 -4.34482 | GGCGGGGGGTTTCAC CTCG GGTA CGAG TATTTTTTTACCAAA TP0733 798392 - 799051 + | hypothetical protein TP0734 799785 - 799084 - | purine nucleoside phosphorylase (deoD) TERM 893 799144 - 799129 - G 74 -10.4 -3.54741 | opp_overlap 799122, overlap 799132 TATCATTTGGGTAAA GGAGCG CTCC CGCTCC TGCGCGCTAGTTACC TERM 894 799513 - 799534 + g 74 -8 -4.08216 | CTCCTGCAATCCACC GGCAGTCC CCACGC GGATTGCC TTTTGCACCCCATAA TERM 895 799710 - 799694 - G 85 -2.9 -5.42259 | overlap 799709 GCATTGTGAAAAAAA CGCTCCG CCA CAAAACG CGCACGCAGCGGGTC TP0735 801423 - 799867 - | putative oxidoreductase TERM 896 800256 - 800245 - G 79 -4.4 -4.96848 | GGTCTGACACAAAAA GTGA AACG TCAC CCCCTCATCTTCTGC TP0736 802268 - 801426 - | ferredoxin--NADP(+) reductase subunit alpha TERM 897 802456 - 802446 - H 83 -8.2 -4.43477 | overlap 802448 CTCATTCAAGCAAAA CGCC ATC GGCG CCGAGAAGGGTCCGA TERM 898 803686 - 803696 + G 75 -5.4 -4.64657 | overlap 803693 GCAAAACACACCCCA CAGA GCC TCTG TTTTTCCAGATTTCG TP0737 802502 - 803812 + | sugar ABC transporter, periplasmic binding protein (msmE) TP0738 804193 - 803858 - | hypothetical protein TERM 899 803923 - 803906 - G 81 -8.3 -4.4009 | overlap 803907 GTCGAGGTCATAAAA GGCGCGC GCCT GCGCGCT CATAAGATGAACCAG TERM 900 803922 - 803907 - G 77 -11.8 -3.23733 | overlap 803906 TCGAGGTCATAAAAG GCGCGC GCCT GCGCGC TCATAAGATGAACCA TERM 901 804033 - 804017 - G 73 -9.4 -3.59979 | overlap 804021 TTCTCTTAGGCCAAA GCGAGC CGCCT GCTCGC ACACCAGACGATGAG TP0739 805386 - 804190 - | hypothetical protein TERM 902 804794 - 804804 + g 70 -5.4 -4.36903 | opp_overlap 804794 ACACTACGCAACAAA GCTA AAA TAGC TTTCTGTTTCCTCGA TERM 903 805041 - 805028 - G 77 -3.1 -5.02502 | opp_overlap 805033 CACACTACAGAAAAA GGAAC GTTA ATTCC CGTTAACTTTTCTAC TP0740 806026 - 805460 - | hypothetical protein TERM 904 806041 - 806002 - G 78 -10.6 -3.54543 | opp_overlap 806028 ACCTAGGTGGCGAAA GCACTGCGCGCGCGTACG CGTC CACACGCGCAATCAGCGC CGTCATATCTGCAGA TP0741 806768 - 806154 - | hypothetical protein TERM 905 806693 - 806667 - G 72 -8 -3.93583 | gap 1, opp_overlap 806683 GAAGGTAGGCACAAA CAGCACG-CGG TCATAC CCGGCGTGCCG GTGTACTGCATCAGC obgE 807895 - 806765 - | GTPase ObgE rpmA 808276 - 808013 - | 50S ribosomal protein L27 TP0744 808633 - 808307 - | hypothetical protein rplU 808963 - 808646 - | 50S ribosomal protein L21 TP0746 811775 - 809070 - | pyruvate phosphate dikinase TERM 906 809494 - 809478 - G 100 -10.1 -5.04325 | opp_overlap 809478, overlap 809479 CCCAAACGAGAAAAA CTGCGCG TAG CGCGCAA TCTCGTCTGCACTCA TERM 907 809493 - 809479 - G 85 -11.4 -3.6151 | opp_overlap 809478, overlap 809478 CCAAACGAGAAAAAC TGCGCG TAG CGCGCA ATCTCGTCTGCACTC TERM 908 810557 - 810537 - G 75 -11.3 -2.91264 | opp_overlap 810540, overlap 810540 CGTTGCAGGCATACA CAAGATACA CCG TGTATCTTG TCCGCCCATCTTCGC TP0747 812819 - 811785 - | hypothetical protein TERM 909 812874 - 812845 - R 100 -12.2 -4.77036 | TTTGATGATTAAAAA GCTCCCCGAAAC AGAAAA GTTCCAGGGAGC TTCGGATCACGACAA TP0748 814944 - 812908 - | cytoplasmic filament protein A (cfpA) TP0749 815143 - 814922 - | hypothetical protein TP0750 815113 - 815784 + | hypothetical protein TP0751 815821 - 816534 + | hypothetical protein TP0752 817814 - 816672 - | hypothetical protein TERM 910 816744 - 816726 - G 76 -8.1 -4.24342 | TCGGTGACCAACAAA GCCGGAA TCATC CTCCGGC ACAAAAACTTGGTAG TERM 911 817780 - 817758 - G 95 -6.8 -5.29445 | opp_overlap 817779, overlap 817759 817761 GTGGAAGAAGAAAAA GGACGCGCAC ACC GCGCGCGACA GCACCATGCGCTGTG TERM 912 817779 - 817759 - G 79 -10.3 -3.76582 | overlap 817758 817761 TGGAAGAAGAAAAAG GACGCGCAC ACC GCGCGCGAC AGCACCATGCGCTGT TERM 913 817777 - 817761 - G 82 -11.5 -3.44752 | overlap 817759 817758 GAAGAAGAAAAAGGA CGCGCAC ACC GCGCGCG ACAGCACCATGCGCT TP0753 818179 - 817895 - | hypothetical protein TP0754 819546 - 818176 - | hypothetical protein TERM 914 818538 - 818522 - G 75 -5.1 -4.61868 | TAGTGATACATAAAA GCGGAAT CAA ACTCCAC CTCCCGCATGAGATC TERM 915 819156 - 819125 - G 87 -4.4 -5.2166 | gap 1, overlap 819138 GAAGAAGCGAAAAAA CGATACCCAGAGACA GGA TG-CTCCCGGTAACG CTCGGAGATAAACTC TP0755 820130 - 819588 - | PTS system, nitrogen regulatory IIA component (ptsN-2) TERM 916 819764 - 819749 - G 74 -3.3 -4.98255 | CGGCAATCATAAAAA CAAGA TGTACG TCTTG TCCGTCAAGAGGACC TERM 917 819978 - 819968 - G 70 -6.8 -4.10331 | overlap 819977 TCAAGCAATCAGAAA GCTC ATA GAGC GCCGGACGACGCTCA TP0756 821289 - 820330 - | methionyl-tRNA formyltransferase (fmt) TERM 918 821017 - 821001 - G 70 -3.7 -4.60041 | overlap 821003 ACCGAGGGCCAAAAA TCTTACC GTA GGCAAAA CACACCAGCACGTCC TP0757 821781 - 821293 - | polypeptide deformylase (def) TERM 919 821397 - 821373 - G 88 -2.1 -5.47218 | TGCGATCCAAAAAAA GAATACCGTCA AGA TGATCGTACTC GTGCTGGATCACTCT rpsU 822031 - 821822 - | 30S ribosomal protein S21 TERM 920 821969 - 821981 + g 71 -9.1 -3.42379 | TTCCTTCTCCACCTG GCGCT TGA AGCGC TTAATTGCCTTCTCT TERM 921 822077 - 822052 - H 100 -10.5 -5.40072 | gap 1, overlap 822054 822056 CTCCCCTGAAAAAAA CAC-AGCCTACC AGG GGTAGGCTAGCG CAAAAGACGTCCCCT TERM 922 822074 - 822054 - H 93 -11.9 -4.34482 | overlap 822052 822056 CCCCTGAAAAAAACA CAGCCTACC AGG GGTAGGCTA GCGCAAAAGACGTCC TERM 923 822072 - 822056 - H 86 -12.3 -3.76885 | overlap 822054 822052 CCTGAAAAAAACACA GCCTACC AGG GGTAGGC TAGCGCAAAAGACGT TP0759 822150 - 822269 + | hypothetical protein TP0760 822226 - 824184 + | penicillin-binding protein (pbp-3) TERM 924 824201 - 824188 - g 86 -3.7 -5.34381 | opp_overlap 824188 AAACTCAAATAAAAA GCGAG ATCC CGCGC GTTTCCCGGCCGGTG TERM 925 824959 - 824905 - g 95 -7.1 -5.36965 | gap 1, opp_overlap 824907 CAACACTATAAAAAA TGCCGCACAGCTGTGTGTGCGCAC GCCCGTAA ATGCGCTG-CGCAACTGCGCGGCA GGGAGTACTGCACTC TP0761 824165 - 825043 + | hypothetical protein TP0762 825072 - 826253 + | hypothetical protein TERM 926 826279 - 826312 + TF 74 -10.9 -3.53012 | gap 1, overlap 826279 826291 CACTCAAAGACGTGT GTGGG-GCGCAGGGGC AGG GCCCGTGCGTTCCCCC TTTCAGGGAAAGAGC TERM 927 826279 - 826311 + TF 79 -13.3 -2.71712 | overlap 826279 826291 CACTCAAAGACGTGT GTGGGGCGCAGGGGC AGG GCCCGTGCGTTCCCC CTTTCAGGGAAAGAG TP0763 827256 - 826315 - | hypothetical protein TERM 928 827136 - 827124 - Gf 70 -4.1 -4.59773 | GTGCACCGTTAAAAA GCACT ACT AATGC TTTGATCTTCATGGG TERM 929 827165 - 827190 + gF 74 -10.3 -3.46602 | GGAAATCTCCTATAC TGCCTCCCCGC CTGT GCGGGGCGCCA TTCTACTATGGGGGC TERM 930 828100 - 828081 - gR 77 -3.4 -5.04222 | CAAGGAAATGAAAAA CGCCGCTG AGGG CATCGTCG ACCTTGTGCGTAACG TP0764 827215 - 828390 + | hypothetical protein TERM 931 828383 - 828435 + Tr 76 -3.2 -5.02476 | gap 1, opp_overlap 828379, overlap 828369 828400 TCCTTCAGGAAGGTG GCGACTGACCCTGC-GCAGGGGCAG ATGC CCCTTCCTGCTGCTGGCTTAGACGC TTTTTTAGCCCCTCT TP0765 830201 - 828372 - | cell division protein (ftsH) TERM 932 829544 - 829531 - G 76 -8.1 -4.15044 | GCTTGTTTGAATAAA TCGCG CACA CGCGA GGCGCCAATCCCCAC TERM 933 830097 - 830077 - G 91 -11.8 -4.09215 | overlap 830089 830090 GAGAGCAACGAGAAA CCCCGCGC AGAAG GCGCAGGG CGCGCGGAAGTGTAC TERM 934 830296 - 830321 + H 87 -8.3 -4.56597 | gap 1, overlap 830274 GAATTTCTGCGCGGA GGTCTTTCG-CG TGA CGACGAAGGGCC TTTTTGAGGGCGGGG TERM 935 830584 - 830548 - H 84 -2.8 -5.40072 | GGTGCTGCAAAAAAA CACACGCGCGCGGCTA TTGCT TACCCTCATGCGCGCG TTCACCGAAACTTCA TERM 936 830629 - 830645 + G 74 -7.9 -4.03234 | overlap 830630 CCTATCACCCGTACC CGGGCGA CAA TCGCCCC TTTCTATACGCCGCG TERM 937 830630 - 830644 + G 75 -11.4 -3.01726 | overlap 830629 CTATCACCCGTACCC GGGCGA CAA TCGCCC CTTTCTATACGCCGC TERM 938 830783 - 830796 + G 71 -2.3 -4.98255 | CATTGGTGCACGCAC GCGTG GGGA CACCC TTTTTATCCTTGCCG TP0766 830604 - 831485 + | hypothetical protein TERM 939 831586 - 831615 + F 72 -12.1 -2.85351 | gap 1, opp_overlap 831568, overlap 831596 831601 831602 GGCGCCCGTCTTCCC CGCGGTGGC-GGGC TGC GCCCTGCTACCCCG TCTGCTGTGGAGCGG TERM 940 831596 - 831639 + F 70 -2.8 -4.7254 | overlap 831586 831601 831602 TTCCCCGCGGTGGCG GGCTGCGCCCTGCTACCCCG TCTG CTGTGGAGCGGGGCCTTGTC TTTTTCCTGAGGGCT TERM 941 832344 - 832354 + G 71 -3.2 -4.77173 | CGGGATGAACTCATC GATG CGG CGTC TTTGTTTTCTGACGA TERM 942 833197 - 833185 - g 72 -6.2 -4.38116 | CCCACAAAAAGCAAA CCGG CGGTT CCGG GCAGTTCGGGCGTGT TP0767 831696 - 833783 + | elongation factor G TERM 943 834726 - 834700 - g 70 -4.4 -4.58395 | TGCAGTCTGCAAAAA CAAAGCAAAAGG CGT CCTCTGACCTTG CGCGGAGTGCGGATA TP0768 833922 - 834959 + | membrane protein (tmpA) TP0769 834956 - 835933 + | outer membrane protein (tmpB) TERM 944 836013 - 836059 + G 81 -4.3 -5.03994 | gap 1, opp_overlap 836012 836014 836015, overlap 836021 AGCCCATAGAGAAAG AGCTCCCAGAGCGCTGGAACGC TACG GTG-TCCAGCGCTCTTTGTGTG TTTTTGTCTCTACAA TERM 945 836021 - 836051 + G 100 -14.1 -4.40232 | gap 1, opp_overlap 836014 836012 836015, overlap 836013 GAGAAAGAGCTCCCA GAGCGCTGGAACGC TACG GTG-TCCAGCGCTC TTTGTGTGTTTTTGT TERM 946 836285 - 836270 - g 77 -6 -4.62069 | overlap 836271 CCGGGACTGGAAAAA CGGCCG CCTT CGGCCT CCCCCTTATCCAAGA TERM 947 836646 - 836635 - g 74 -5.8 -4.46112 | opp_overlap 836635 836631 836629, overlap 836631 TCTCATGCAAATAAA GACG CACG CGTC CTTATGTTTTCTGCC TERM 948 836799 - 836812 + G 76 -9.5 -3.7732 | opp_overlap 836799 836796 836795 CGCTGACAAAATCGA GGCGC TTGT GCGCC TTATTGATGTGAGCG TP0770 835978 - 837927 + | ATP-dependent RNA helicase TP0771 839729 - 837948 - | hypothetical protein TP0772 839733 - 840557 + | hypothetical protein TP0773 841793 - 840597 - | periplasmic serine protease DO (htrA-1) TERM 949 841904 - 841875 - H 100 -17.1 -3.09327 | opp_overlap 841878 841890 CCAGCTGAGCTAATA GCCCACGGCGCCA CGCG CAGCGCCGCGGGC AGCGTGTATTGGAAT TP0774 842138 - 842812 + | Mg2+ transport protein (mgtC) TP0775 842892 - 843527 + | endonuclease III (nth) TP0776 844380 - 843604 - | hypothetical protein TERM 950 843788 - 843776 - G 72 -10.5 -3.06315 | GCAAGATTCTCAACA CGCGC AGC GCGCG ACAATGTTTTCTGCG TERM 951 844286 - 844267 - G 73 -11.4 -2.60238 | overlap 844262 844266 ACAGCACAGAGGAAC CGTCCCAG TACA CCGGGACG CACAAAAAACACAGC TERM 952 844384 - 844374 - G 82 -3.2 -5.24129 | TCGCGCGAGAAAAAA GGAT CAC ACCC CTACGTCCYTACCTC TP0777 844657 - 844433 - | hypothetical protein TP0778 845637 - 844726 - | mazG protein (mazG) TERM 953 844765 - 844823 + g 71 -10.9 -2.91276 | gap 2, opp_overlap 844765 844767, overlap 844766 844804 GTGTCGAGTAAAAAA CA-GTCGC-CGTGACCGTGCGCGCCTGCG CAC CGCAGACGCCCGCGTGCGTGCGCGACGTG GTTTATGGCACGCGC TERM 954 844823 - 844765 - G 86 -6.5 -5.14563 | gap 2, opp_overlap 844765 844766 844804, overlap 844767 GTGTCGAGTAAAAAA CA-GTCGC-CGTGACCGTGCGCGCCTGCG CAC CGCAGACGCCCGCGTGCGTGCGCGACGTG GTTTATGGCACGCGC TERM 955 844820 - 844767 - G 82 -9.3 -4.20707 | gap 1, opp_overlap 844766 844765 844804, overlap 844765 GTCGAGTAAAAAACA GTCGC-CGTGACCGTGCGCGCCTGCG CAC CGCAGACGCCCGCGTGCGTGCGCGAC GTGGTTTATGGCACG TERM 956 845125 - 845112 - G 84 -3.7 -5.24129 | opp_overlap 845114, overlap 845114 GTGTTGGACAAAAAA GACGC GCAC GCGAC GCGTTTTTTTGCATT TERM 957 845114 - 845128 + g 100 -4.2 -5.61824 | opp_overlap 845112 845114 GTTGGACAAAAAAGA CGCG CACGCGA CGCG TTTTTTTGCATTTTG TERM 958 845190 - 845166 - G 74 -10.7 -3.17212 | GCATGAGGGGAGGAA CCGTTCGAGGA ATG CCCTCTAACGG AGAAGCTGCACGGCG TP0779 846278 - 845634 - | dedA protein (dedA) TERM 959 846280 - 846266 - G 93 -3.5 -5.52096 | AAACCCAAGAAAAAA GCGTA TGCAC CACGC CCTACGCACCTCCAT nadE 848364 - 846325 - | NAD synthetase TERM 960 846517 - 846492 - G 100 -9 -5.75945 | overlap 846494 AGCGGGTAAAAAAAA CGCGCAGC GCTGCACATA GCTGCGCG CAAGAATACGCAKTT TERM 961 846578 - 846561 - G 71 -2.7 -4.8048 | CGGCCACACGAAAAA GTTTTCG AGGA CCAAAAC CGTTCACCGTTATGT TERM 962 847341 - 847322 - G 71 -2.1 -5.00616 | GTTCTTTGCAAAAAA CCGTC CTGCGTGTCT GACGG TGCAGAAACAGCGAG TP0781 848862 - 848401 - | hypothetical protein TP0782 849351 - 848908 - | hypothetical protein TP0783 850513 - 849380 - | hypothetical protein TERM 963 851106 - 851135 + G 72 -11.5 -2.52623 | gap 1, overlap 851105 851104 CAAGCGATCACTTCT CCCCTGTTCGCATC AGC GATGC-ATCAGGGG CTGTTGTCACCGGGG TP0784 850679 - 851278 + | hypothetical protein TERM 964 851684 - 851673 - g 71 -2.2 -4.94487 | TGACAAAAGAGAAAA CGTA ATGG CACG TGCAGAGCGCATAGT TP0785 851275 - 851961 + | hypothetical protein TP0786 852093 - 852806 + | ABC transporter, ATP-binding protein, putative TP0787 853272 - 852853 - | hypothetical protein TERM 965 853931 - 853909 - g 71 -3.4 -4.74103 | overlap 853894 853888 CGCGCAATCGAAAAA GAAATTCCCC ACT GCGCAATTTC AGAGGTGGTGCTTTC TERM 966 854092 - 854109 + G 74 -2.7 -5.02074 | opp_overlap 854076 854089, overlap 854091 854089 854088 TTTGAAATGCAACGC CTCAC AAAGTGGG GTGAG TTTTTTCAGCGCTAC TP0788 853354 - 854244 + | hypothetical protein TP0789 855033 - 854257 - | hypothetical protein TERM 967 854813 - 854803 - G 80 -5.4 -5.00642 | opp_overlap 854803 854801 854791 CAACGGAGACAAAAA CTCT ATA AGAG TCTTTTGCTCTCCAC TP0790 857718 - 855052 - | antibiotic transport protein, putative TERM 968 856673 - 856661 - G 71 -3.3 -4.82548 | CAAAAAGATACAAAA CCAAC GAA GGTGG TAAGTGCAGACAAAA TERM 969 857612 - 857599 - G 79 -3.7 -5.0538 | CTGGACTGCAAAAAA GAGCG TCAG CGCGC TAAGCACCGCAACAA TP0791 858106 - 857861 - | hypothetical protein TP0792 858092 - 858952 + | flagellar filament 33 kDa core protein (flaB2) TERM 970 858969 - 858997 + FH 100 -18.9 -3.30338 | opp_overlap 858973, overlap 858973 858995 TCTTCTCACCGCTTC GAAAGGCCGGCGC TGC GCGCCAGCCTTTC TTCTAAAGAGCTTGT TERM 971 858973 - 858993 + FH 100 -13.9 -4.30719 | opp_overlap 858973, overlap 858969 CTCACCGCTTCGAAA GGCCGGCGC TGC GCGCCAGCC TTTCTTCTAAAGAGC TERM 972 858993 - 858973 - fH 100 -16.1 -3.53811 | opp_overlap 858973 858969 CTCACCGCTTCGAAA GGCCGGCGC TGC GCGCCAGCC TTTCTTCTAAAGAGC TERM 973 860251 - 860200 - g 82 -9.4 -4.25053 | gap 1, overlap 860197 860201 TCACAACACAAAGAA CGTCCGCACGTGCAGTTCCCGTGCA TCA CGCACAGGAAC-ACACGCGGAGGCA AGACATTCCGATATC TERM 974 860250 - 860201 - g 74 -10.7 -3.13947 | gap 1, overlap 860197 860200 CACAACACAAAGAAC GTCCGCACGTGCAGTTCCCGTGCA TCA CGCACAGGAAC-ACACGCGGAGGC AAGACATTCCGATAT TP0793 859031 - 860650 + | hypothetical protein TP0794 861877 - 860687 - | S-adenosylmethionine synthetase TP0795 861931 - 862089 + | hypothetical protein TP0796 863166 - 862078 - | hypothetical protein TERM 975 863258 - 863202 - R 95 -3 -5.82316 | gap 2, opp_overlap 863246, overlap 863205 863209 863236 863240 AGCAGTCAAAAAAAA CAAGCAATGCACCCTGC-C-CACCCCTT AGG AAGAACTGAGCGCAGCGCGCACCGCGTG TATAACTGCACGGCG TERM 976 863248 - 863205 - R 75 -3.6 -4.97383 | opp_overlap 863246, overlap 863202 863209 863236 863240 AGTCAAAAAAAACAA GCAATGCACCCTGCCCACCC CTTA GGAAGAACTGAGCGCAGCGC GCACCGCGTGTATAA TP0797 864017 - 863226 - | 1-pyrroline-5-carboxylate reductase (proC) metG 866503 - 864068 - | methionyl-tRNA synthetase TERM 977 864515 - 864493 - G 81 -4.9 -5.06816 | gap 1, overlap 864498 ATGTTTCAACAAAAA GCAT-ATCCG CATT CGGATGACGC TCCACCTGCAACACT TERM 978 864588 - 864617 + g 75 -5.7 -4.65078 | gap 1 AACCGTGCAGTATCT GAGGGAGGGGGCAT TTC ACGCTCC-TCCTTC TTTTGTTGAGCGTCT TERM 979 864986 - 864963 - G 95 -9.6 -5.06451 | TACCACGGCAAAAAA GGATGCGCTA AAAT CAGCACATCC CGAATCACATAGCAT TERM 980 865175 - 865194 + g 78 -8.6 -4.20783 | gap 1 TGCAGTATTCCGCAC CGCTTCGCG GAG CGC-AAGCG TTTCTTCCATCACCT TP0799 866536 - 866688 + | hypothetical protein TERM 981 866854 - 866827 - f 76 -12 -3.01712 | gap 1, opp_overlap 866815 866827 GCTCTGTCCCTAATA CG-GTGTGCCGGG ACA CCCGGTACACGCG TGTACTGCCCGTTTG TERM 982 866827 - 866854 + F 83 -14.2 -2.80307 | gap 1, opp_overlap 866827, overlap 866815 GCTCTGTCCCTAATA CG-GTGTGCCGGG ACA CCCGGTACACGCG TGTACTGCCCGTTTG TP0800 866831 - 868303 + | serine-type D-Ala-D-Ala carboxypeptidase (dacC) TP0801 870793 - 868364 - | ATP-dependent Clp protease subunit A (clpA) TERM 983 869048 - 869073 + g 70 -10.4 -3.12923 | opp_overlap 869044, overlap 869044 869043 CCCAACATAACCGGG CGGTGAGCCG ATCAAC CGACTCACCG TGTGCTTTTCCTGAT TERM 984 870942 - 870914 - g 81 -12.4 -3.14125 | gap 1, overlap 870907 870912 TTCATATACGCAAGA CGCGCAGGCACGC CTTT GCGCGCC-GCACG AACGGCAAAAACGAT TP0802 870839 - 871168 + | hypothetical protein TERM 985 871730 - 871710 - g 72 -7.6 -3.86015 | gap 1, opp_overlap 871713 871714, overlap 871724 TATCTTTGTTACAAA CTCGCGCGT AACC ACGCGC-AG CGCACTGCGCTTGGG TERM 986 871912 - 871902 - g 90 -4.6 -5.43553 | AGGGAAAAAACAAAA CCGA TTA CCGG GAACATAGCATCCAC TERM 987 872280 - 872264 - g 70 -6.5 -4.18018 | opp_overlap 872277 872279 TTTTGCTATTCAAAA CGGCG GTGGACA CGCCG GTGCCATCGGCTTCC TP0803 871182 - 872390 + | hypothetical protein TP0805 875761 - 873482 - | exoribonuclease II (rnb) TP0804 872468 - 873631 + | sugar ABC transporter, ATP-binding protein (ugpC) TERM 988 874172 - 874196 + gT 76 -4.1 -4.91109 | overlap 874166 GGCGGTTGTGCTCAC GCGACGAGC TTTCATC GCGCGCCGC TTTTTGTACTCCCCC TERM 989 874616 - 874600 - GT 79 -10.1 -3.83026 | overlap 874611 CCTCCGCATAGGAAA GGCGCGT AAC ACGCACC ATGCTCCGGAGCACG TERM 990 875432 - 875418 - GT 74 -2.8 -4.88918 | overlap 875413 875420 TCATTGCAAACAAAA TACGCA CTT TGCACA CTTTGCTCCCAATAG TP0806 877254 - 875758 - | femA protein, putative TERM 991 876524 - 876476 - G 70 -5.9 -4.26903 | gap 1, opp_overlap 876483 876486, overlap 876477 GCGAGCGTATCAAAA CGCGCCACA-CGCACACCGTGC TTTTGC GCACGTCGAACGTTGTAGCGCC ATTTTGGTTTGAAAG TERM 992 876486 - 876496 + g 70 -6.8 -4.08767 | opp_overlap 876477 876476, overlap 876483 CAAAACGCGCCACAC GCAC ACC GTGC TTTTGCGCACGTCGA TERM 993 877323 - 877356 + H 71 -9.5 -3.61398 | TGCACAATGGCGAGC CTGTGTGTTGCGGTC GACG GTCCGAAGCGCACAG TTCTTGCGCAGAAAG TERM 994 877435 - 877413 - g 76 -7.6 -4.21827 | opp_overlap 877416, overlap 877416 GCAAATACCTCAAAA GCACGCACCC GTA GAAGGCGTGC GGTTAATATGCGGCT rpmF 877383 - 877571 + | 50S ribosomal protein L32 TP0808 877632 - 877868 + | acyl carrier protein (acpP) TERM 995 878283 - 878309 + G 91 -2.9 -5.53288 | gap 1, overlap 878284 AAGCCATCCTTGCCG ACGCTACCGAAG CTGT CATCGGT-GCGC TTTTTTTGGATTCAG TERM 996 878583 - 878568 - g 100 -6.1 -5.55664 | overlap 878570 878578 GCACCAGCAAAAAAA GCGCA GAACAG TGCGC CGCTCGCCTTGCATG TP0809 877865 - 878629 + | ribonuclease III (rnc) TERM 997 879089 - 879111 + G 70 -5.4 -4.42386 | TTCAATGTGCCTCTC GGACGCGCTG CAC CTGCGTCTCC TTTTCTAAATACCAC TP0810 878660 - 879571 + | DNA adenine methyltransferase (dam) TP0811 879767 - 879642 - | hypothetical protein TERM 998 880453 - 880489 + r 74 -2.2 -5.1101 | gap 1, opp_overlap 880435, overlap 880454 TGCACCGCGCGATAT GCACAGCGTGTACTGCG TGTA CGCAC-GCACGATGTGG TTTTTTCGCTCCTCC TP0813 882464 - 881178 - | hypothetical protein TERM 999 881278 - 881296 + g 70 -4.5 -4.56597 | opp_overlap 881261 881291 AGCCGAACGAATACG GCACCCT CAGAT AGTGTGC TTTTTGCGCACCCAG TERM 1000 881468 - 881456 - G 70 -4.8 -4.4715 | CGTTAATGTACAAAA CAGG CTTCC CCTG ACGGAAAAAAAGGTA TERM 1001 882363 - 882335 - G 89 -13.1 -3.28712 | overlap 882316 882318 882336 CGCGCCGGCGTACAA CCTGCGCACGCCG AGG CTGCGTGCGCAAA GCACACAGCGCGCGC TERM 1002 882362 - 882336 - G 90 -14.4 -2.57132 | overlap 882316 882318 882335 GCGCCGGCGTACAAC CTGCGCACGCCG AGG CTGCGTGCGCAA AGCACACAGCGCGCG TERM 1003 883373 - 883360 - g 72 -8.1 -3.92602 | opp_overlap 883360 883371 TTAAGACGGGAGAAA CGCGA GAGC TCGCG TGTGATGCTGTTTTC TP0814 882687 - 883610 + | thioredoxin reductase (trxB) TERM 1004 884431 - 884400 - g 72 -8 -3.96506 | gap 1, overlap 884395 CAGTCCAAAACATAA GGCGACCGTGCGTAC CCT GCACGCAC-ATCTCC GTACACGCGTGATAT TP0815 883732 - 884715 + | hypothetical protein TP0816 885452 - 884787 - | hypothetical protein TERM 1005 885440 - 885419 - G 100 -13.7 -4.2558 | TATCGCTGACGAAAA CTCCCGCGC CCAT ACGCGGGAG TATAAAACACATCCT TP0817 886888 - 885590 - | enolase (eno) TERM 1006 886400 - 886410 + g 73 -4 -4.77567 | CATAACCATAAACTC TTGA AAG TCAA TTTTATTATCAGAAT TP0818 887037 - 886885 - | hypothetical protein TP0819 887996 - 887064 - | ribonuclease Z TP0820 888794 - 888024 - | hypothetical protein TP0821 889696 - 888890 - | lipoprotein (tpn32) TP0822 890682 - 889777 - | hypothetical protein TERM 1007 890073 - 890084 + g 70 -5.8 -4.18197 | CACTTCCATACGCCA CGGA AACT TCCG TTTTCACTCGGCGAT TP0823 891156 - 890770 - | desulfoferrodoxin (rbo) TERM 1008 891522 - 891544 + H 81 -8.4 -4.31692 | TAGTCTCGGCCCGTG CGCCTTCTGT TCG ACATGAGGCG TTTTCGTCATGGATT TERM 1009 892180 - 892166 - g 95 -12.8 -4.22338 | ACCAGAAGCTCAAAA CGCGGC TTC GCCGCG CGCTCCAGACTGTCC TP0824 891553 - 893445 + | 1-deoxy-D-xylulose-5-phosphate synthase TERM 1010 893541 - 893529 - g 76 -10.5 -3.37053 | ATACAGCGGAAGGAA CGGGG AGG CCCCG CCTGCTCACGCCAGG TP0825 893442 - 893627 + | hypothetical protein TP0826 893614 - 894435 + | hypothetical protein TERM 1011 895011 - 895022 + GF 77 -5.8 -4.64861 | opp_overlap 895010 TTGGACTTATCAATC CGAG TACG CTCG TTTCTTTTCCAAAAA TP0827 894098 - 895375 + | hypothetical protein TP0828 895372 - 895749 + | holo-acyl-carrier protein synthase (acpS) TERM 1012 895799 - 895782 - g 93 -3.5 -5.53079 | gap 1, opp_overlap 895782 AAAACAGACAAAAAA GAAAG-CA CTG TGTCTTTC TATTCAAAAGAGCGC TP0829 895746 - 896630 + | hypothetical protein truA 896627 - 897469 + | tRNA pseudouridine synthase A argS 899248 - 897479 - | arginyl-tRNA synthetase TERM 1013 898035 - 898061 + g 70 -11 -2.79796 | TCTTCTGCCGCACTG TGCAGACGAT CCAAGAT ATCGTCTGCA TCTACTACCGTCCCC TERM 1014 898391 - 898381 - G 79 -2.4 -5.26316 | CCATCTGATAAAAAA CGCC GCA GGCC AAACCACGTCTAACC TP0832 900086 - 899271 - | hypothetical protein TERM 1015 900255 - 900244 - g 72 -4.4 -4.65895 | opp_overlap 900244 TGCTGCAGCCAAAAA CCAA CGCT TTGG ATCTTGTCGTGCAGG TERM 1016 900357 - 900338 - g 86 -10.8 -3.90048 | overlap 900336 900354 CCCTCCTGAAAAAGA CGTGTTCT TCAC AGAACACG AAGGGGTGCTTCGTG TERM 1017 900501 - 900516 + G 75 -6.8 -4.36914 | overlap 900491 GTGCGCGGCGTACGC GCGGTG TGGT CACTGC TTTTGTGCAACGAAG TP0833 900153 - 900875 + | hypothetical protein TP0834 902182 - 900932 - | tyrosyl-tRNA synthetase (tyrS) TERM 1018 902148 - 902127 - G 72 -4.3 -4.63932 | overlap 902128 902130 902142 CATTGTCTAATAAAA CCACGCGCC TGAA GACGCGCAA GCGCAGGATTCATGG TERM 1019 902311 - 902283 - R 77 -8.1 -4.08945 | ACTATTCCTTTAAAA GCGCTGCAATCTT CGG ACGACTCCAGCGC ACCGCAACGTCATAG TP0835 905073 - 902269 - | ankyrin, putative TERM 1020 903916 - 903928 + g 81 -4.7 -5.13741 | opp_overlap 903915 903916, overlap 903915 903917 AATCGTGAGGACAAG CGGCG TTT CGCCC TTTTTGTTCCGTTCA TP0836 906038 - 905214 - | hypothetical protein TERM 1021 905545 - 905517 - G 70 -3.7 -4.68593 | opp_overlap 905520, overlap 905518 905520 GCTACGATGCAAAAA TGACTGCACCTGC CGT GCACGCGCAGTTC CTGCTGGATCTTGCG TERM 1022 905542 - 905520 - G 70 -9.8 -3.26807 | opp_overlap 905520, overlap 905518 905517 ACGATGCAAAAATGA CTGCACCTGC CGT GCACGCGCAG TTCCTGCTGGATCTT TERM 1023 905598 - 905614 + g 70 -3.6 -4.63218 | overlap 905599 GAGCTGAACCGTTTT TGCCGT GTGAA GCGGCG TTTTGTTCAACAGCA TERM 1024 905921 - 905896 - G 90 -7.5 -5.02074 | gap 1, overlap 905897 905898 GCACGGTGCAAAAAA GCCTGCGGCGTG CAA CACGCCACTG-C AGACTGCGCTGCATG TERM 1025 905920 - 905898 - G 70 -11.2 -2.75975 | overlap 905896 905897 ACGGTGCAAAAAAGC CTGCGGCGTG CAA CACGCCACTG CAGACTGCGCTGCAT TERM 1026 907083 - 907069 - g 82 -2.8 -5.26875 | TCTTCAAGCAAAAAA CACG CAGTTAC CGTG ATCTCCCGCTCCGTC TERM 1027 907903 - 907913 + G 72 -6.8 -4.20883 | overlap 907879 CCCAGCACTCAATGG GGCT CTC AGCC TTTTCCACCTTTTTG TP0837 906186 - 907964 + | threonyl-tRNA synthetase (thrS) TP0838 909677 - 908013 - | ABC transporter, ATP-binding protein TERM 1028 908529 - 908544 + g 72 -6 -4.36914 | opp_overlap 908501 908527 908529 TCCCCAACGGAAAGA GCCGGC ATGT GCCTGC TTTTCTCCAGCAAGA TP0839 910759 - 909752 - | hypothetical protein TERM 1029 910734 - 910747 + g 82 -2.3 -5.35222 | AAACAAACGATAACA GTGTG TGCA CGCGC TTTTTTGTCCATTTT TERM 1030 911182 - 911200 + G 75 -5.2 -4.64763 | GCACAAGACTATACG GCACTTGC ACT GTATGTGC TTATTTTTTCCGTCG TERM 1031 911705 - 911726 + G 93 -10.1 -4.49344 | TCACCGTATGTGCAT CCGGCGGTG CACT CATCGTCGG TTTTATAATGAGTTT TERM 1032 913008 - 912995 - g 86 -6.7 -4.88067 | ACCTAGGGACAAAAA CAGCA CTCC TGCTG AGTCTTACGTTGGAG TP0840 910864 - 913113 + | hypothetical protein TP0841 914632 - 913175 - | periplasmic serine protease DO (htrA-2) TERM 1033 913337 - 913361 + g 70 -10 -3.18264 | gap 1, overlap 913336 CTTCAATCCCATCAG CGCCGCAGGGC TTTT GCTCTGCG-CG TTGCTAACTAGCACA TERM 1034 913461 - 913473 + g 74 -2 -5.14965 | GGCCAAAGCTTTGAG TAGT CATTT ACTA TTTTTTCATCACGCT TERM 1035 914173 - 914141 - G 90 -13.4 -3.53012 | opp_overlap 914159 GTCTGCGTCCTCAAA GGAGACCAGCGCGA TGTCC TTGCGCTGGTCACC ACCGACAAGTTTACC TERM 1036 914688 - 914671 - R 76 -2.7 -5.01497 | gap 1, overlap 914672 914674 914678 914679 AGCAGCAGATAAAAA CGAGCAAC GCC GCTGCT-G TAAAAAAACTGCGGC TERM 1037 914712 - 914697 - R 90 -4.6 -5.40072 | overlap 914679 914678 914698 GCTGCTGTAAAAAAA CTGCGG CATA CCGCAT GTACCCCACACACAA TERM 1038 914711 - 914698 - R 71 -8.1 -3.83561 | overlap 914679 914678 914697 CTGCTGTAAAAAAAC TGCGG CATA CCGCA TGTACCCCACACACA TP0842 915711 - 914944 - | methionine aminopeptidase (map) TERM 1039 915028 - 915003 - G 74 -6.2 -4.56597 | gap 1 TGTGGTCTGCAAAAA CTGCCACAGTG TGCTC CAC-ATGGCAG GCACACGATCCGTCT TERM 1040 915294 - 915281 - G 71 -9.5 -3.53174 | opp_overlap 915291, overlap 915269 915279 ACAGCGCGAGAAACA GCGCG CACG CGCGC TCCGGCACGGCACGC TERM 1041 915445 - 915408 - G 74 -8.5 -3.87373 | overlap 915438 GACACGCGTCAGAAA TGTATCCATTGAGGTTG ATAC CAACATCAAGGGAAACA AGATCCCCGTCCTGA TP0843 916659 - 915835 - | heat shock protein, putative TERM 1042 916671 - 916655 - G 83 -5.1 -5.03994 | GGGCACATAGAAAAA TGCAAGG GAG CCCTACA GCAAAGAGGGATTGA TP0844 916752 - 917804 + | glyceraldehyde 3-phosphate dehydrogenase (gap) TERM 1043 917848 - 917807 - T 70 -9.5 -3.34233 | gap 1, opp_overlap 917807 917809 917811 917815 GCAGAAGCGGTAGAA GACACTAGGAGTCCACCCGC CCG GCCT-TGGACTCTTAGTGTC TTGCGTGCGGTCACC TERM 1044 917807 - 917848 + T 76 -11.7 -3.06796 | gap 1, opp_overlap 917807, overlap 917809 917811 917815 GCAGAAGCGGTAGAA GACACTAGGAGTCCACCCGC CCG GCCT-TGGACTCTTAGTGTC TTGCGTGCGGTCACC TERM 1045 917862 - 917872 + T 74 -8.2 -3.94333 | overlap 917856 917868 TCTTGCGTGCGGTCA CCGG CGG CCGG TTTGGCTTTTCCCTT TP0845 918449 - 917859 - | P23 protein, putative TERM 1046 918378 - 918344 - G 80 -12 -3.28712 | overlap 918315 918347 CCGCTCTCGCGACAA GTACGCGGACGCGCGC GGG GCATGAGTCCGCGTCC ACCCACAGCGTCACC TERM 1047 918375 - 918347 - G 77 -12.3 -2.82623 | overlap 918315 918344 CTCTCGCGACAAGTA CGCGGACGCGCGC GGG GCATGAGTCCGCG TCCACCCACAGCGTC TP0846 918756 - 918430 - | hypothetical protein TP0847 919091 - 918756 - | hypothetical protein rplT 919453 - 919085 - | 50S ribosomal protein L20 rpmI 919686 - 919486 - | 50S ribosomal protein L35 infC 920278 - 919739 - | translation initiation factor IF-3 TERM 1048 920323 - 920303 - H 84 -6.1 -5.05782 | overlap 920306 ATGCACGCTAAAAAA CAAGACTGG GCC CCAATCTAG CCATTCCTAATATGT TERM 1049 920320 - 920306 - H 75 -6.4 -4.63089 | overlap 920303 CACGCTAAAAAACAA GACTGG GCC CCAATC TAGCCATTCCTAATA TERM 1050 920705 - 920722 + G 76 -12.7 -2.60763 | overlap 920704 GGGCTCGTACGCATC GCGTCGC TCGA GCGACGC CTTCTGCGATATCAC TERM 1051 921800 - 921788 - g 100 -3.3 -5.95166 | overlap 921778 921773 921789 CGCAACGAAAAAAAA TTCGC TGC GCGAG ACAAACGAAAAACGA TERM 1052 921799 - 921789 - g 72 -6.8 -4.15473 | overlap 921778 921773 921788 GCAACGAAAAAAAAT TCGC TGC GCGA GACAAACGAAAAACG TP0851 920441 - 922615 + | hypothetical protein TP0852 923642 - 922644 - | prolipoprotein diacylglyceryl transferase TERM 1053 922866 - 922855 - G 100 -2.2 -5.8187 | TACTCAATAAAAAAA CGAA ACAC TCCG TACCCCACCACATAC TERM 1054 923772 - 923753 - R 71 -4.2 -4.57569 | opp_overlap 923755, overlap 923755 923765 923767 GTATTCTCCCAAAAA CACCCCCA CAAA TAGGGGTT ATACCCCACCCTCAT TP0853 924929 - 923793 - | ATP-binding protein (ylxH-2) TERM 1055 924502 - 924488 - G 76 -7.8 -4.19817 | overlap 924444 GGTAGGCATTCAAAA CCGCAG AAA CTGCAG GCTCAGTAACGATAA TP0854 929585 - 924984 - | hypothetical protein TERM 1056 925333 - 925318 - G 70 -4 -4.65895 | opp_overlap 925325, overlap 925319 TTTTGTAGGGAAAAA CCTTTC CTCA GAAAGA CTGATTCGATAATGC TERM 1057 925482 - 925472 - G 70 -4.6 -4.56597 | opp_overlap 925472 GCTTGTTTCTAAAAA GACG CTT CGCC TCTTCTATGCCATCA TERM 1058 927652 - 927665 + g 74 -2.3 -5.0538 | ATCGACATCTGCAAT GAACC GGCA GGATC TTTTTTCACATCCAC TERM 1059 929023 - 929010 - G 76 -3.8 -4.96848 | overlap 929019 TTCGGTAGACAAAAA CTCC TGAAAG GGAG TCCAACGCTCCCCAT TP0855 932965 - 929582 - | hypothetical protein TERM 1060 932146 - 932134 - G 86 -9.1 -4.29656 | GAGAAAACTTTAAAA GCGCT CCA AGCGC TTGGACCAGGGAAGT TERM 1061 932276 - 932243 - G 100 -18.9 -2.8194 | TAAGGAGTGAGGATA CGCTGCACTCGGTGC GCGG GCACCGGGTGCAGCA GGCGCAGCGGGGGCG TERM 1062 932421 - 932453 + g 100 -16.3 -4.57341 | opp_overlap 932419 932418 932416, overlap 932424 932425 GCGCGGGAAACATGC GCATGTGCGTGCTCG ACG CGAGCACGCACCTCC TTTTTCCCCGGACTT TERM 1063 932424 - 932450 + g 100 -16.6 -3.23708 | opp_overlap 932419 932418 932416, overlap 932421 932425 CGGGAAACATGCGCA TGTGCGTGCTCG ACG CGAGCACGCACC TCCTTTTTCCCCGGA TERM 1064 932425 - 932449 + g 100 -20.1 -2.53903 | opp_overlap 932419 932418 932416, overlap 932424 932421 GGGAAACATGCGCAT GTGCGTGCTCG ACG CGAGCACGCAC CTCCTTTTTCCCCGG TERM 1065 932654 - 932672 + g 77 -6.6 -4.44974 | CTCGTGTATTTCTTT GCTCTCTG GAC CGGCGAGC TTTTCTAACGTTTCG TP0856 933121 - 934098 + | hypothetical protein TP0857 934421 - 934101 - | hypothetical protein TERM 1066 934316 - 934306 - Gf 74 -8.2 -3.93288 | opp_overlap 934309, overlap 934307 TCGGACGCAAGTAAA GCGC GCG GCGC CAGCGCTGCGTGATT TERM 1067 934309 - 934326 + gF 70 -10.5 -2.70932 | opp_overlap 934306 934307 GACGCAAGTAAAGCG CGCGGCG CCAG CGCTGCG TGATTGCCAAAGGCG TERM 1068 934338 - 934360 + gF 100 -12.7 -4.77173 | gap 1, opp_overlap 934338 TGCGTGATTGCCAAA GGCGGCTGCC CAGG GGC-GCCGCC TTTCTTTTCTCCGCG TERM 1069 934360 - 934338 - Gf 88 -12.7 -3.57144 | gap 1, opp_overlap 934338 TGCGTGATTGCCAAA GGCGGCTGCC CAGG GGC-GCCGCC TTTCTTTTCTCCGCG TP0858 934406 - 935632 + | hypothetical protein TERM 1070 935681 - 935709 + FH 100 -8.2 -5.14563 | GCTGAAGAATGCGGA GCGGCAAGAC GTGGAGGGG GTTTTGCCGC TTTTTTGGTGCGGCG TP0859 935714 - 936412 + | hypothetical protein TERM 1071 936618 - 936596 - g 72 -7.6 -3.96216 | CCTTCACGGAAATAA CGGCGCCG GAGGCAG CGGCGGCG GTGGAGGGGGCAATG TERM 1072 936687 - 936703 + G 82 -3 -5.26119 | gap 1, overlap 936685 936684 ATCCTTGCGCTTGCG TACCAGC CGGT GC-GGTA TTTTCTTTTTGGCGC TP0860 936477 - 937199 + | hypothetical protein TP0861 939181 - 937274 - | glucosamine-fructose-6-phosphate aminotransferase (glmS) TERM 1073 937753 - 937735 - G 86 -11 -3.90762 | overlap 937733 CACGCCCCAAAAAGA GCGCATGC TGC GCATGCAC AAAATGCCGCGCGCA TERM 1074 937778 - 937758 - G 75 -6.7 -4.42386 | overlap 937759 TGCGCATGCACAAAA TGCCGCGCG CAC CGCGCAACG TCTGCCTCACACTCA TERM 1075 937777 - 937759 - G 70 -10.2 -3.2511 | overlap 937758 GCGCATGCACAAAAT GCCGCGCG CAC CGCGCAAC GTCTGCCTCACACTC TERM 1076 937825 - 937868 + g 74 -2.3 -5.08824 | opp_overlap 937840, overlap 937829 CCTGAGGCAGTCGCT GGAGCGC-CGCAGAGAGCGCG TCCT CGGGCTC-CTGCGTGAGTATC TTTTTTGCCTGCGCA TERM 1077 938595 - 938574 - G 100 -5.1 -5.47431 | gap 1, overlap 938586 TCAAGATACAAAAAA CGCT-GCGTA ACA TGCGCAAGCG CAAGCGGGTCTGACG TP0862 940212 - 939418 - | peptidyl-prolyl cis-trans isomerase, FKBP-type, 22 kDa (fklB) TERM 1078 939564 - 939544 - G 93 -9.7 -4.58076 | AGAAGGCACATAAAA CCGATAGGT AGA ACCCACCGG CATCAGCTTTAAGCC TERM 1079 941134 - 941124 - g 75 -4.6 -4.8048 | GGCGGACAGGAAAAA GAGC GCC GCCC GGGAACTGAGAACCT TERM 1080 941154 - 941192 + G 100 -13.7 -3.70109 | opp_overlap 941144 941148 ACTGAGAACCTTGCA GGTGCGCTCGCGCTCGC CGCTT GCGTGCGCGAAGGCGCC TTCTTCCGTACTCTA TERM 1081 941528 - 941548 + G 85 -8.9 -4.48449 | opp_overlap 941524 941523, overlap 941517 941529 CGGGGTAGAATCCCG CGCAACGCG CGG CGTGCTGCG TTTCTCTTTTGGTCC TP0863 940347 - 941630 + | nitrogen fixation protein (nifS-2) TP0864 943329 - 941689 - | hypothetical protein TERM 1082 942718 - 942745 + g 85 -8.4 -4.52589 | gap 1, opp_overlap 942711 942710, overlap 942719 AAAACGAGGCACCGC G-GTGCGCGCAAG CGG CGTGCGTGCACTC TTTTCTCTCCGGAAA TERM 1083 942719 - 942743 + g 93 -12.1 -3.87627 | opp_overlap 942711 942710, overlap 942718 AAACGAGGCACCGCG GTGCGCGCAAG CGG CGTGCGTGCAC TCTTTTCTCTCCGGA TERM 1084 943341 - 943311 - G 81 -9 -4.06419 | gap 1, opp_overlap 943309 943311 943315, overlap 943315 GCCCCGTATAAAGAA CACACCTCGCCGG GCGCAA CCGCCGAGG-GTG TCTTTCCCGATAAAG TP0865 944802 - 943363 - | hypothetical protein TERM 1085 943605 - 943588 - G 91 -7.7 -5.14563 | GTCTCGATTAAAAAA TCCTGCA ATTC CGCAGGA AATGACATGCTCATC TERM 1086 943863 - 943849 - G 70 -5.6 -4.32857 | overlap 943852 CGTGCCAAAGAGAAA CCACCG TAT CGGTTG ATACGCACATGCGAG TERM 1087 944585 - 944559 - G 95 -15.8 -2.87931 | overlap 944536 CGGACGTTCCAGACA CGGCACGCCGCA CCC TGCGGTGCGCCG GCACTCGTGCGCGAA TERM 1088 944745 - 944725 - G 83 -10.3 -4.09108 | CCGAACTGATAGAAA GCTGCGCGC ACC GCGCACCGC AGCACATCCGCACGC TERM 1089 945451 - 945466 + r 70 -3.2 -4.72272 | overlap 945451 AGCAACTGAAACCGT GCAGGA TACG TGCTGC TTTTTCCTGCGCGAC TP0867 946979 - 946794 - | hypothetical protein TP0868 947148 - 948008 + | flagellar filament 34.5 kDa core protein (flaB1) TERM 1090 948138 - 948173 + G 100 -20 -4.18018 | AGGCCTTCGTGTGGG CGGTTCTGAGGCTTTT TCTA AAAAGCTTCAGAACCG TTTTCCGTGGCGCGG TP0869 948023 - 948259 + | hypothetical protein TP0870 948287 - 949144 + | flagellar filament 31 kDa core protein (flaB3) TERM 1091 949228 - 949256 + T 100 -10.4 -5.2894 | opp_overlap 949237 TGTGAACGCCCATGA GGGAAAGAGG AGCCGCATG CCTCTTTCCC TTTTCTTTTCTCTTT TP0871 949366 - 949205 - | hypothetical protein fliD 949442 - 951610 + | flagellar hook-associated protein FliD TP0873 951622 - 952224 + | hypothetical protein TP0874 952221 - 952496 + | hypothetical protein TP0875 952536 - 952943 + | hypothetical protein TP0876 952990 - 953655 + | hypothetical protein TP0877 953660 - 954757 + | hypothetical protein TERM 1092 954769 - 954785 + T 70 -2.9 -4.70169 | CTGAGCATCCTCAAT CCTAGTC AGA GATAAGG TTTTCTTCGGTGTCA TP0878 955720 - 954770 - | hypothetical protein TP0879 957207 - 955726 - | hypothetical protein TERM 1093 956044 - 956060 + g 72 -5.8 -4.4267 | opp_overlap 956044 ACGAAATGCAACAAA TGCCTG GGGAG CGGGCA TTTTACCTTTTGCAA TERM 1094 956188 - 956175 - G 81 -6.7 -4.72007 | GGGCAGGAAAAGAAA CTCGT ATTG ACGAG GGCCAAAATAATCGA TP0880 957929 - 957204 - | membrane spanning protein, putative TP0881 958725 - 957919 - | ABC transporter, ATP-binding protein (natA) TP0882 960306 - 958804 - | hypothetical protein TERM 1095 959140 - 959159 + gr 100 -2.8 -5.67063 | gap 1, opp_overlap 959139, overlap 959127 959145 CCCTGCTGCAGCAAC GCGTGCACG CAG TGTGT-CGC TTTTTTTCTCATCCA TERM 1096 959596 - 959582 - GR 100 -10 -4.94243 | TTAAAAAAATCAAAA GCATGC TCA GCATGC AACTGCTCAAGAGCT TERM 1097 959704 - 959689 - GR 71 -3.2 -4.74132 | overlap 959691 ATACCTCACTAAAAA TTCGGA ATCT TCCGTA CTCCCCATGTTTCCA TP0883 961369 - 960272 - | hypothetical protein TERM 1098 960838 - 960851 + gr 73 -3.9 -4.77438 | CGATAAGCTTCTGAA TAGTA CCGT TACTA TTTTTCATAATAACT TERM 1099 961375 - 961398 + r 87 -8.2 -4.5442 | opp_overlap 961375, overlap 961376 TGTCCAACATATACA CCTGCAGTAT TTTC ATACTGCAGA TTTTCTCATTGACAA TERM 1100 961376 - 961397 + r 80 -11.7 -3.3217 | opp_overlap 961375, overlap 961375 GTCCAACATATACAC CTGCAGTAT TTTC ATACTGCAG ATTTTCTCATTGACA TP0884 962475 - 961387 - | hypothetical protein TERM 1101 962167 - 962157 - G 87 -4.6 -5.30448 | AAACAAATACAAAAA GCGC ACT GCAC AAACCAATCGACAAA TERM 1102 962217 - 962200 - G 80 -5.5 -4.88228 | gap 1, overlap 962201 962212 AGGGAATATCAAAAA CCGCGGCG AAA CGCC-CAG CACTTGCAGCGCAAG TP0885 962945 - 962505 - | deoxyuridine 5'-triphosphate nucleotidohydrolase (dut) TP0886 965050 - 962942 - | polynucleotide phosphorylase/polyadenylase TERM 1103 963413 - 963387 - G 70 -6.6 -4.13945 | overlap 963388 ACCGCTATTTTAAAA CTCTCAATATGC GGC GCATAGCGAGAA ATGTGCACGCTCGGT rpsO 965467 - 965198 - | 30S ribosomal protein S15 TERM 1104 965297 - 965316 + g 77 -7.2 -4.54821 | gap 1, opp_overlap 965296 965299, overlap 965297 965299 ACGCCCCACCAGAAC G-AGCAACC CCC GGTTGCTAC TTTTGTCCTTCGGAT TERM 1105 965299 - 965313 + g 70 -10 -3.22215 | opp_overlap 965296 965299, overlap 965297 965297 GCCCCACCAGAACGA GCAACC CCC GGTTGC TACTTTTGTCCTTCG TERM 1106 965422 - 965449 + g 77 -9.9 -3.61988 | overlap 965418 CCTTTTCTCCTGAGC CGTACTGCTGC ACTACC GAAGCAGTACG TTCCTTTGTCAGTGC TP0888 966310 - 965483 - | riboflavin kinase/FMN adenylyltransferase (ribF) TP0889 967414 - 966314 - | tRNA pseudouridine 55 synthase (truB) TP0890 967772 - 967392 - | ribosome-binding factor A (rbfA) infB 970297 - 967769 - | translation initiation factor IF-2 TERM 1107 969485 - 969472 - G 75 -5.3 -4.62069 | opp_overlap 969464 TGCCCATGCCAAAAA GCTTA CCGA TAAGC TCTGAGGCTTTTAAA TERM 1108 970228 - 970247 + g 70 -6.4 -4.25104 | gap 1 AAATAGTCGCCTGAC TCGCGTCGC CCG GCG-TGCGA TTTTCATCCGCGCAC nusA 971930 - 970473 - | transcription elongation factor NusA TERM 1109 970828 - 970854 + g 81 -8.2 -4.36914 | opp_overlap 970825 GAAGAAAACTCAGAC TCTTCTTGATAA TCG TTATCAAAAAGA TTTTCTGCCGCACGA TP0893 972450 - 971980 - | hypothetical protein TERM 1110 972366 - 972348 - G 72 -7.4 -3.88787 | GCACACGCCGAGAAA CAGCGGAA ACG CTCCACTG CAGATCGACAAGGGC TP0894 973647 - 972625 - | hypothetical protein TERM 1111 972960 - 972948 - G 72 -4.8 -4.62336 | ACTGCACCTCAAAAA GCTC AGGAA GAGC CTCCACCATTTCCCG TP0895 974160 - 973654 - | hypothetical protein TP0896 974334 - 974182 - | hypothetical protein TERM 1112 974252 - 974215 - G 100 -25.9 -4.56597 | opp_overlap 974215 GCGCCGGCGCAAAAA TTCCACGTATCGGGTCA TATG TGACCCGATACGTGGAA TTTTTGCATACCTTC TERM 1113 974215 - 974252 + g 100 -25.9 -4.68424 | opp_overlap 974215 GCGCCGGCGCAAAAA TTCCACGTATCGGGTCA TATG TGACCCGATACGTGGAA TTTTTGCATACCTTC TP0897 975833 - 974316 - | TPR protein K (tprK) TERM 1114 974888 - 974904 + g 87 -5 -5.18726 | ACGCATCTGCGCCTA CGGTGC CCTGC GCTCCG TTTTTCTTATGCCCC TP0898 979549 - 975830 - | ATP-dependent nuclease, subunit A, putative TERM 1115 976219 - 976202 - G 72 -6.9 -4.20516 | overlap 976205 976213 GGGGGAGTGAAGAAA GCAGGCC ACAA GGCGTGC CGCAGGGGAATCAAC TERM 1116 977351 - 977312 - G 76 -3.5 -5.0133 | gap 1, overlap 977313 977333 CACGCGCGCAAAAAA GTCCGCGCCTGC-ACG TACACACCG CGCCGCAGGCGCCGAT AACTCCGCGGGGATA TERM 1117 977581 - 977606 + g 74 -9.7 -3.48276 | gap 1, opp_overlap 977580 977571 GAATACCCCACAGAC GCAGCGCGCGCT CGT ACCGCGC-CTGC TTGTCTGCAGAACGC TERM 1118 977990 - 978010 + g 88 -12.5 -3.70104 | opp_overlap 977986, overlap 977999 TGAAAACAGTATGTT GAGGCGCTC AAG GAGCGCCGC TTCTGTTCGGTAATT TERM 1119 978238 - 978250 + g 74 -10.5 -3.21099 | opp_overlap 978236 978237 CAGGAGGGAGGAAGT GCGCG GTG CGCGC TTCGTGCTCGGCAAG TERM 1120 978284 - 978274 - G 100 -5.4 -6.09888 | CGGCAAGAAAAAAAA GAAG TTC CTTC TGGAGGGCATTGTTA TERM 1121 978631 - 978619 - G 85 -3.3 -5.36441 | CCTTCAGACAAAAAA GCGTT TTT ACCGC CGCACAATACCGCAG TERM 1122 979064 - 979050 - G 74 -2.8 -5.00616 | opp_overlap 979050, overlap 979052 TCCTGCTGCAAAAAA TGCAGT ACC ACTGGA TGTTCCCGATGCTCA TERM 1123 979180 - 979163 - G 88 -8.3 -4.70659 | opp_overlap 979162, overlap 979147 979164 CGCGATACCGAAAAA GCGCGCG CCTA CCCGCGC AATTTCGTGCGAAAA TP0899 980133 - 979546 - | hypothetical protein TERM 1124 979817 - 979805 - G 100 -3.3 -6.07627 | overlap 979806 ACGTCTAAAAAAAAA GCGTG CGT CACGG TATACCCCGCCTGCT TERM 1125 979816 - 979806 - G 72 -6.8 -4.22949 | overlap 979805 CGTCTAAAAAAAAAG CGTG CGT CACG GTATACCCCGCCTGC TP0900 982505 - 980112 - | hypothetical protein TERM 1126 980908 - 980892 - G 70 -4.4 -4.56775 | ATCCGCGCGCAAAAA GGTACC TCGCT GATACC GCACGCTACTCGCTT TERM 1127 980976 - 980958 - G 72 -4.4 -4.69027 | overlap 980959 AAAGTGATGCAAAAA GGGCGCAG CCG CCGCAACC CGATAGGGAAAAATC TERM 1128 981550 - 981515 - G 70 -6 -4.18494 | TATGCGGATTCAAAA GCAGCGCCCGCACGCT TTTG AGCGTGCCATGACTGC GCACAAACTCTCGAA TERM 1129 982470 - 982454 - G 93 -3.6 -5.49568 | overlap 982456 AAGGGAAAACAAAAA GACGCC TATAG GGCGTG CGGACAGTTTTTATA TERM 1130 982468 - 982456 - G 72 -6.2 -4.3613 | overlap 982454 GGGAAAACAAAAAGA CGCC TATAG GGCG TGCGGACAGTTTTTA TP0901 983956 - 982544 - | hypothetical protein TERM 1131 982943 - 982931 - G 84 -7.7 -4.67234 | ACCTAACCCTAAAAA GAACG CTC CGTTC ATCAACCACCGTGCA TERM 1132 983234 - 983251 + g 71 -2.6 -5.00616 | opp_overlap 983234 983246 ACAGCGACAAAAAAG CCGCAC ATAAAA GTCCGG TTTTTTAACCCGCAC TERM 1133 983535 - 983549 + g 76 -4.2 -5.00616 | CCTTCCGCTATAATC TGAGCA GCC TGCGCA TTTTTTCCCAACAAA TP0902 984878 - 983997 - | carboxylesterase (est) TERM 1134 984438 - 984427 - G 73 -3.6 -4.82901 | TTCTGGGGACAAAAA CGCG CCGC CACG AGTGCAGTCAGCACA TERM 1135 984946 - 984966 + G 81 -8.9 -4.36914 | overlap 984949 CTCGGCGTGCACGGC GGGGGCTGC GCG GCAGCCTGC TTTTGTGCAGAAGCG TERM 1136 984949 - 984963 + G 77 -11.4 -3.1733 | overlap 984946 GGCGTGCACGGCGGG GGCTGC GCG GCAGCC TGCTTTTGTGCAGAA TP0903 984880 - 986478 + | UDP-N-acetylmuramoylalanine--D-glutamate ligase (murD) TP0904 986471 - 986722 + | hypothetical protein TERM 1137 986758 - 986726 - gf 72 -8.5 -3.72027 | gap 1 ATTGGGGAGTAAGAA GCGTCC-GTACTAC CGAATC GTAGTTCAGGACGC GCGCGAGCCGAGAGA TP0905 986685 - 987056 + | ribosomal protein S16 (rpsP) TERM 1138 987230 - 987248 + G 75 -11.6 -3.03459 | opp_overlap 987229 987228 AAGCACGGCAGAATT GCGCGCGC TCT GCGCACGC TCCTTTCTGCGTCTG TP0906 987065 - 987307 + | hypothetical protein TERM 1139 987757 - 987772 + G 77 -8.2 -4.14392 | TTGAGCGTTGTCGAA GGGGGC GGTA GCTCCC TTTTAGAGGTTCAAA TP0907 987370 - 987894 + | hypothetical protein TERM 1140 987918 - 987933 + GF 83 -7.5 -4.55697 | GTACTGACTCTCTTT CCCGC CATCCC GCGGG TTTATTTCTCCACCT TERM 1141 988311 - 988289 - gf 73 -12 -2.72344 | opp_overlap 988268 988283, overlap 988307 988309 TTGCATCGGGAACTA CGTTCTCTCC TCA GGAGAGATCG CCGCGCTCGTGCTCA trmD 987891 - 988643 + | tRNA (guanine-N(1)-)-methyltransferase rplS 988615 - 988986 + | 50S ribosomal protein L19 TERM 1142 989351 - 989361 + G 78 -8.2 -4.25283 | overlap 989339 GCCGCAGCTCATTGA GCGC TTT GCGC TTTTGCTAAAAAAGT TP0910 988983 - 989903 + | hypothetical protein TP0911 989925 - 990176 + | hypothetical protein TERM 1143 990360 - 990341 - g 70 -5.6 -4.43844 | overlap 990342 CGACGACGGAGAAAA CCTCCTCC TCAG GGAAGGGG AGCCGGTAAGCACTC TERM 1144 990797 - 990784 - g 72 -5.3 -4.52589 | opp_overlap 990784 TGCTGTCATACAAAA TCGAA GGAT TTCGA TTTGCAAAACCTGCA TERM 1145 991358 - 991378 + G 73 -9 -3.59583 | gap 1, opp_overlap 991329 991354 991351, overlap 991354 GGTAAAGACCACGGC CACGG-CGC CGTT GCGTCCGTG TTTAAGAATAGTTAT TP0912 990189 - 991511 + | hypothetical protein TP0913 991495 - 991875 + | hypothetical protein TERM 1146 992089 - 992107 + G 74 -3.1 -5.00616 | gap 1, overlap 992090 992091 AGAAGAAAAAGGAAG CG-CACGC CGAG GCGTGATG TTTTTTCGCCAAAGC TP0914 992047 - 992433 + | hypothetical protein TERM 1147 993245 - 993235 - g 72 -6.8 -4.24745 | GACCATTAAGACAAA GCTG AAC CAGC TGGAGGACGCTGCAG TERM 1148 993363 - 993351 - g 95 -9.1 -4.90455 | opp_overlap 993358, overlap 993353 993358 AGACACTGATAAAAA CCCAG AAC CTGGG AAGAGCCCTGGTTAT TP0915 992507 - 993841 + | hypothetical protein TP0916 993898 - 994026 + | hypothetical protein TP0917 994010 - 995359 + | Mg2+ transport protein (mgtE) TP0918 995374 - 996147 + | hypothetical protein TP0919 996490 - 996173 - | thioredoxin (trx) TERM 1149 998619 - 998588 - g 73 -9.4 -3.68394 | gap 1, opp_overlap 998590 998591 998594, overlap 998585 998591 998593 GAAAATTATATAGAA CTACAGCGCCAGCGC GGT GCGCTAGCG-TGCTG TGTTCCCCTGTTTGA TERM 1150 998616 - 998591 - g 75 -11.9 -2.93113 | gap 1, opp_overlap 998590 998591 998594, overlap 998588 998585 998593 AATTATATAGAACTA CAGCGCCAGCGC GGT GCGCTAGCG-TG CTGTGTTCCCCTGTT TERM 1151 998615 - 998593 - g 72 -11.2 -3.00907 | opp_overlap 998590 998591 998594, overlap 998591 998588 998585 TTATATAGAACTACA GCGCCAGCGC GGT GCGCTAGCGT GCTGTGTTCCCCTGT TERM 1152 998594 - 998614 + G 77 -12.5 -2.75826 | opp_overlap 998593 998591 998588 998585, overlap 998590 998591 TATATAGAACTACAG CGCCAGCGC GGT GCGCTAGCG TGCTGTGTTCCCCTG TP0920 996713 - 999142 + | hypothetical protein TP0921 999250 - 1000587 + | NADH oxidase TP0922 1001614 - 1000721 - | hypothetical protein TERM 1153 1001471 - 1001459 - G 81 -10.5 -3.62224 | overlap 1001460 ACATTCGTGCAAGAA GCGCG CCG CGCGC CGCAGCACGAGCGGG TERM 1154 1001480 - 1001460 - G 77 -12.5 -2.77013 | overlap 1001459 CATTCGTGCAAGAAG CGCGCCGCG CGC CGCAGCACG AGCGGGAATACCTTT TP0923 1002672 - 1001653 - | hypothetical protein TERM 1155 1001899 - 1001923 + g 79 -2.1 -5.252 | gap 1 GTACTTGAGCGACAG GCC-GACATC GGTTGA GAAGTCCGGC TTTTTTATCCCCGTC TERM 1156 1003474 - 1003450 - g 72 -7.8 -3.92869 | gap 1, opp_overlap 1003459, overlap 1003451 CCACGCAGGCAGAAA TCGAGCGC-GC TGCC GCAGCGCTCGT CGCTCCTGCTGCAGA TERM 1157 1003473 - 1003451 - g 75 -11.3 -2.954 | gap 1, opp_overlap 1003459, overlap 1003450 CACGCAGGCAGAAAT CGAGCGC-GC TGCC GCAGCGCTCG TCGCTCCTGCTGCAG TERM 1158 1005262 - 1005239 - g 71 -9.5 -3.55444 | CCCTGAGCGCGCAAA GACACGGGG CACATC CCCCGCGCC GGGACAGGATTTCGC TP0924 1002996 - 1005332 + | tex protein (tex) TP0925 1005699 - 1006139 + | flavodoxin TERM 1159 1006155 - 1006176 + T 76 -12.3 -3.12847 | GGGGATGTCTTTCCT GAGCCCTTG TAAG CGAGGGCTC TTCCCTATCCCGCTT TERM 1160 1006246 - 1006258 + T 90 -10.5 -4.30933 | CCTGCTGCGCGCCTG GGCGG GTT CCGCC TTTCTTAGCTTTCTC TP0926 1007828 - 1006290 - | signal peptidase I, putative TERM 1161 1006906 - 1006918 + g 75 -4.7 -4.85782 | overlap 1006906 1006907 AGCTGTGTGATCTCC CGCGC CCC GCGCA TTTCTTTTTCAAACA TERM 1162 1007019 - 1007047 + g 100 -13.2 -4.57755 | gap 1 CGCCGCCCCCGCGTA CGCGTGCGCTTGG GCAA CCAA-CGCGCGCG TTTTCTCTGCTAAAT TERM 1163 1007104 - 1007071 - G 72 -7.3 -4.17089 | GCTAAATCGCGAAAA TCCACCTGGGCGCGC AGGC GCTCTACCAGATGGA TGGCGGCGAGCTCCT TERM 1164 1007630 - 1007618 - G 70 -5.5 -4.33767 | overlap 1007626 ACAAATTCACCAAAA GCATG AAA CACGC AGCCTGGGTGAGCGC TERM 1165 1007972 - 1007955 - g 95 -12.7 -4.15565 | CGCACGACGCCAAAA GCGCCAG CACG CTGGCGC ACCGTTAGCACATAC TERM 1166 1008429 - 1008415 - g 100 -10 -5.252 | GACGGGTACAAAAAA GTGCAC GAA GTGCAC ATTCACCAATCCCTT TP0927 1007920 - 1008510 + | hypothetical protein TERM 1167 1008945 - 1008931 - g 70 -5 -4.5123 | overlap 1008927 AACCGAGCAAACAAA GCAAAG CGG CTTTAC CCTCAGCGAGGAGCT TERM 1168 1009339 - 1009320 - g 77 -12.8 -2.73875 | overlap 1009317 CTCCTCGGAAGAGGA CGCGCGCC GCAC GGCACGCG CTCTAGAGAAACGGG TP0928 1008605 - 1009345 + | hypothetical protein TP0929 1009357 - 1010127 + | hypothetical protein TERM 1169 1010250 - 1010240 - g 72 -4.6 -4.6955 | opp_overlap 1010237 TATCAAGACACAAAA CGGC TTC ACCG TTCTTTACCGCAACA TERM 1170 1010858 - 1010870 + G 71 -3.3 -4.87291 | TTTTTGTGCCCGCAT GAAGG ACA CCATC TTTTTACTTGCCGTA TP0930 1010151 - 1011872 + | hypothetical protein TP0931 1013386 - 1011956 - | hypothetical protein TERM 1171 1012000 - 1012010 + g 74 -3.2 -4.96848 | TCCCCGAGGGGATTG GGAG CGT CTTC TTTTTCTGTCCAAGG TERM 1172 1013218 - 1013236 + g 71 -3.1 -4.82901 | ATATGATTTCATGCT GACTGAT AATTA ATCCGTC TTTTTCTGGAAACAC TP0932 1013488 - 1013396 - | hypothetical protein TP0933 1015120 - 1013498 - | UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (murE) TERM 1173 1015048 - 1015065 + g 78 -8.4 -4.15044 | CTATGGAAGAAACGT CGCACG CACTAC CGTGCG TTTCTTGCACAGAAC TERM 1174 1015263 - 1015273 + G 84 -4 -5.24531 | opp_overlap 1015263, overlap 1015249 TCCGCCGCATGAAAA TTTG GCT CAAA TTTTTTGTCGGCAGT TP0934 1015256 - 1016479 + | glutamate transporter, putative TERM 1175 1016456 - 1016466 + T 71 -4.6 -4.62441 | overlap 1016445 1016442 GGAACTGTGCGCCAC CGCG CGG TGCG TTTCTTTATCTGAGC TP0935 1017410 - 1016472 - | N-acetylphosphinothricin-tripetide-deacetylase, putative TERM 1176 1016902 - 1016891 - G 72 -7.2 -4.1523 | overlap 1016899 CCCAAGGAGAAATAA GCGC CAAA GCGC GCGGACACACCAGCC TP0936 1018677 - 1017604 - | hemolysin, putative TP0937 1019484 - 1018849 - | hypothetical protein TP0938 1020311 - 1019481 - | hypothetical protein TERM 1177 1019667 - 1019644 - G 70 -6 -4.20707 | gap 1, overlap 1019665 TCGGAGGAAAAAACA CCCTG-TTCCC GAA GGGAATCAGTG ACATTCGCAAATGCC TP0939 1023930 - 1020376 - | pyruvate oxidoreductase TERM 1178 1023442 - 1023431 - G 76 -3.6 -4.95211 | overlap 1023432 1023435 AAAAAATGAACAAAA GGCA CGCG CGCC TCGAGCGTCGCAGCA TP0940 1024086 - 1023946 - | hypothetical protein TERM 1179 1024057 - 1024069 + g 90 -4.7 -5.40072 | GTGCATCGGCTGCAC GCGGG ACT CACGC TTTTTTTCAAAAAAC TP0941 1024643 - 1024125 - | hypothetical protein TERM 1180 1024476 - 1024454 - G 93 -8.5 -5.0538 | gap 1 CCTGATCCGAAAAAA GCTTA-CCGG TTCT CCGGATAAGC CCCATCTTTTCAACC TP0942 1025184 - 1024720 - | hypothetical protein TP0943 1025636 - 1025190 - | flagellar protein (fliS) TP0944 1026857 - 1025685 - | hypothetical protein TP0945 1027684 - 1027028 - | ribulose-phosphate 3-epimerase (cfxE) TERM 1181 1027127 - 1027083 - G 100 -5 -5.78622 | gap 1 GTACCGGAAAAAAAA GCAGA-GCCTGACACTATCAC ATCC GCACCAGCGTCAAGCGCCTGC GGCAACGTGCGACAG TP0946 1027836 - 1028504 + | glucose-inhibited division protein B (gidB) TP0947 1029196 - 1028549 - | peptidyl-prolyl cis-trans isomerase, cyclophilin-binding (cyp) TP0948 1029888 - 1029193 - | spoIIIJ-associated protein (jag) TERM 1182 1029644 - 1029629 - G 82 -2.4 -5.40625 | ACATGAGATAAAAAA GCACGC AGCT GCGCCC CAAGATCTGCAAACT TERM 1183 1029714 - 1029681 - G 91 -10.9 -4.21811 | CACTCAACACAGAAA CCGGATCGTACTGCG CATG CGCCGCATGACCCGG CGAGGCGGTGACCGC TERM 1184 1029898 - 1029908 + r 86 -6.8 -5.00467 | CACCATACACCGACT CCTG CAT CAGG TTTTATTCTTGTTAG TP0949 1031901 - 1029904 - | putative inner membrane protein translocase component YidC TERM 1185 1030051 - 1030061 + gr 82 -3.2 -5.20216 | CACATAGGTCATAAT CGTC ATG GATG TTTTTTGCTGCTCTG TERM 1186 1031713 - 1031700 - GR 78 -6.7 -4.56358 | CAGACGGATACAAAA GTTCC TGAA GGAAC GAAGCTCCCACAAGC TP0949a 1032056 - 1031772 - | hypothetical protein TP0950a 1032459 - 1032053 - | RNAse P, protein component TERM 1187 1032255 - 1032229 - G 74 -10.1 -3.53091 | gap 1, opp_overlap 1032229 ACGCCTCTTTTGAAA GCCGTCGTGCGC GATT GCGCGCGA-GGC TTTTCCATAGCCGCG TERM 1188 1032229 - 1032255 + g 95 -12.3 -4.18018 | gap 1, opp_overlap 1032229 ACGCCTCTTTTGAAA GCCGTCGTGCGC GATT GCGCGCGA-GGC TTTTCCATAGCCGCG rpmH 1032620 - 1032465 - | 50S ribosomal protein L34 TP0952 1033777 - 1032740 - | lipase, putative TERM 1189 1033071 - 1033088 + g 78 -8.5 -4.1822 | TCATACGACCGTTCA GGATATG CCAA CATATCC TTTGTTCCCGTCAGA TERM 1190 1033466 - 1033451 - G 74 -8.2 -3.91897 | opp_overlap 1033461 CTGTGCAGCCAGAAA GCGCGC TAAC GCACGC TGATAATCTTGCGTG TP0953 1035049 - 1033859 - | pheromone shutdown protein (traB) TERM 1191 1034086 - 1034064 - G 93 -9.8 -4.4448 | AAACCCGTAAACAAA CCCACCCCGA TTA TCGGCGTGAG TACTGCAATTGGCGC TP0954 1036572 - 1035136 - | hypothetical protein TERM 1192 1036064 - 1036013 - G 95 -14.3 -3.54129 | overlap 1036017 TACACCTTCCCCAAA CCTACCCGCGCGTCCTGCGCACG CGGCTC CACGCGCAGCGCGCGCGAGAAAG CCTGCACCGCCTGGG TERM 1193 1036060 - 1036017 - G 95 -15.9 -2.64155 | overlap 1036013 CCTTCCCCAAACCTA CCCGCGCGTCCTGCGCACG CGGCTC CACGCGCAGCGCGCGCGAG AAAGCCTGCACCGCC TERM 1194 1036610 - 1036629 + r 76 -5.6 -4.75954 | overlap 1036612 TGCCGACACCCGCGC GTCGCTGA ATTC TCGGCGTC TTTCTTTTACCTTTT TP0955 1036916 - 1036644 - | hypothetical protein TERM 1195 1037029 - 1037018 - g 72 -5.8 -4.32131 | opp_overlap 1037023 GGAAAAGAAATGAAA CACC CCTC GGTG CGCGTATGCTGCTTT TERM 1196 1037156 - 1037166 + G 70 -6.8 -4.10855 | CTGGACGCGCACCTT TCGG ACG CCGA TTTTACGCGCGTTTT TP0956 1037012 - 1037983 + | hypothetical protein TERM 1197 1038066 - 1038048 - f 76 -3.2 -5.00616 | opp_overlap 1038040 1038048, overlap 1038051 TTCTTGTGTAAAAAA TTACTTTT TGC AAAAGGAA TATCTGTATGCGAAC TERM 1198 1038072 - 1038085 + F 70 -3.1 -4.76041 | GCAAAAGGAATATCT GTATG CGAA CGTAC TTTTTCATGAGTGTC TERM 1199 1038327 - 1038347 + G 81 -8.3 -4.39407 | GTCGTCCTGGTCAGG CAGCTCC TCTTGAT GGAGCTG TTTTCAGTTGTTTAG TERM 1200 1038412 - 1038434 + G 77 -12.2 -2.72461 | overlap 1038411 TACGCTCTCGGTCCC CTTTCTCATT CAA AATGAGAAAG ATTTAGAACGAGTTC TERM 1201 1038517 - 1038534 + G 72 -5.5 -4.56597 | CGTCATCACGTGGAC GAACGCC GGTT GGCTTTC TTTTTACACACGCGC TERM 1202 1038733 - 1038744 + G 70 -3.6 -4.60041 | overlap 1038741 AGTGCATTTGTTCAC CTGG GCAA CCGG TTTTTACCGGTACAT TP0957 1038074 - 1039102 + | Tp33 protein TERM 1203 1039473 - 1039490 + G 79 -4.1 -5.1287 | gap 1, overlap 1039476 GCGATCTGTACGGTG GC-AGTGC TCA GCGCTTGC TTTTTTGCGTCTGGA TERM 1204 1039930 - 1039950 + G 84 -7.5 -4.59773 | opp_overlap 1039915 1039913, overlap 1039932 TCCTCACGGATACGG GAGGAATCG TAG CGGTTCCGC TTTTTGCCACTGCAA TERM 1205 1040444 - 1040455 + G 72 -4.4 -4.62336 | CCTGCCAGTGTGTAT TAGC CTGG GCTA TTTTTCCGGTACGCT TP0958 1039134 - 1041032 + | dicarboxylate transporter (dctM) TERM 1206 1041091 - 1041074 - T 81 -6.9 -4.69559 | overlap 1041076 AAAGTTGAAAAGAAA CGCCGCA GGCA TGCTGCG ATCCCCGTTTTATGC TP0959 1041490 - 1041101 - | hypothetical protein TERM 1207 1041453 - 1041405 - G 72 -7.6 -3.90744 | gap 2, overlap 1041408 CGTGCCGCGAAAGAA CCACTACCTTCCATTTTCCCTGTC TTA GACAGGGT-AACGGAAGG-AACAG ACTGCATCCCCAATG flgG 1042296 - 1041502 - | flagellar basal body rod protein FlgG TERM 1208 1041684 - 1041671 - G 81 -9.5 -4.11484 | opp_overlap 1041669 CCGAATCCTTCAAAA CCCGG CCTT CCGGG AATTGGCTGGCCGGA TP0961 1043187 - 1042372 - | flagellar basal-body rod protein (flgG-2) TERM 1209 1042878 - 1042908 + g 71 -9 -3.53224 | overlap 1042882 AAAAACCCATCCCCT CAAGCGCAATATCC GAA GGACTTTGCGTTTG TTTAAGCGAACCCTG TERM 1210 1042882 - 1042904 + g 72 -6.2 -4.41348 | overlap 1042878 ACCCATCCCCTCAAG CGCAATATCC GAA GGACTTTGCG TTTGTTTAAGCGAAC TP0962 1044505 - 1043273 - | hypothetical protein TP0963 1045845 - 1044616 - | hypothetical protein TERM 1211 1045411 - 1045392 - G 78 -9.3 -3.99374 | opp_overlap 1045409 GTTTACCAAGAATAA CGCTGTG CGTGCC CACAGCG TAACCAATAACGCTT TP0964 1046542 - 1045835 - | ABC transporter, ATP-binding protein TERM 1212 1046065 - 1046093 + g 72 -6.6 -4.15833 | gap 1, overlap 1046066 1046074 TTTTCGGCCGCGTGA CCAGCGCG-CGCG CGAT CGCAACGCGCTGC TTTTGCCCTCCTGAT TP0965 1047504 - 1046542 - | membrane fusion protein, putative TP0966 1049163 - 1047529 - | hypothetical protein TERM 1213 1048307 - 1048321 + g 74 -10 -3.55563 | CGTGCGTGCTTGAGC GTTGCG GAG CGCAAC TTTACCGAATGCGCT TERM 1214 1049019 - 1049055 + g 70 -9.9 -3.14132 | CTGAAGCCGTGTGTG CGGGAGGAGCCGGCGTC CCC GGCGCAGGCACTGCCTG TTCCTGCGCACCGAC TP0967 1050763 - 1049210 - | hypothetical protein TERM 1215 1049253 - 1049238 - G 77 -3.2 -5.14682 | opp_overlap 1049238 CCAGAAGAAAGAAAA TCTACG CGCG CGTCGA TGTTAAAAATGAGCG TERM 1216 1049626 - 1049637 + g 70 -5.8 -4.19577 | CGGTGTAACCTATGG CCAG GGCG CTGG TTATTTTGACGCTTG TERM 1217 1049825 - 1049881 + g 81 -5.8 -4.8543 | gap 1, opp_overlap 1049824 1049839, overlap 1049808 CTCGGTGGACACCAG CG-GCATTTCAGGAACGCTTTCAGC CAGCGCGA GCAGAAAGCGCTCCTGATCCGCACG TTTTTCTAAAAATTC TERM 1218 1050599 - 1050633 + g 87 -14.3 -3.07816 | CGTTTCTTGCGCGGC CGCCCGGGCGC-TTGCC GCC GGCGGTGCGCC-GGGCG TTAACTCGCTGGCGG TP0968 1052382 - 1050760 - | hypothetical protein TERM 1219 1050963 - 1050944 - G 79 -10 -3.76373 | gap 1, opp_overlap 1050948 1050949, overlap 1050948 TTGGCAAGATCTAAA CGCA-GCGC CTC GCGCGTGCG CAAGGCGGTTTCTTG TERM 1220 1050948 - 1050971 + g 78 -8 -4.35483 | opp_overlap 1050944 1050948, overlap 1050949 1050969 CAAGATCTAAACGCA GCGCCTCGCG CGTG CGCAAGGCGG TTTCTTGTGCTGCAA TERM 1221 1050949 - 1050970 + g 77 -11.5 -3.20808 | opp_overlap 1050944 1050948, overlap 1050948 1050969 AAGATCTAAACGCAG CGCCTCGCG CGTG CGCAAGGCG GTTTCTTGTGCTGCA TERM 1222 1051657 - 1051637 - G 90 -7.6 -4.83615 | gap 1 GAGTGCTCAGAAAAA CCTGCCGCA CGCG TGCG-CAGG TGCACCAAACGCGCA TP0969 1053998 - 1052379 - | hypothetical protein TERM 1223 1053551 - 1053532 - G 78 -5.7 -4.77438 | opp_overlap 1053540 ACGGAGGAGTAAAAA TCGGTAG TGTAAT CCACCGA CACGGTGGAGGTACT TP0970 1054111 - 1053995 - | hypothetical protein TP0971 1054747 - 1054133 - | membrane antigen, pathogen-specific (tpd) TERM 1224 1054761 - 1054777 + r 72 -11.5 -3.08032 | ATTCTTCACTCCCCT GGGGCGT CAC GCGCCCC TCCTTTTCAAAACGC TERM 1225 1054851 - 1054840 - R 80 -4.4 -5.01422 | TTATAGAAAAACAAA TGGA AATC TCCA CGGCGCAGCACACAC TP0972 1056249 - 1054903 - | hypothetical protein TERM 1226 1056030 - 1055989 - G 74 -2.1 -5.03314 | overlap 1055991 CCCACTCTCAAAAAA GGTGTACGCCGCACGTAGA TGTA CCTCCATGCGCTGCACAAC CTGGCGCCAGGAACT TERM 1227 1057668 - 1057693 + G 80 -11.9 -3.31792 | opp_overlap 1057662 1057661 AGAAGGAATCGTACT GGGTACGGATG TGAA CGTCTGTACCC TTCTAGGCATGCTCA pheS 1056337 - 1057998 + | phenylalanyl-tRNA synthetase subunit alpha TERM 1228 1058049 - 1058036 - T 87 -8.1 -4.66163 | opp_overlap 1058036 ACCCGGACCTAAAAA GCCTG CCTA CAGGC TTATAAATTCTGCTC TP0974 1058331 - 1058050 - | hypothetical protein TERM 1229 1058188 - 1058206 + g 71 -3 -4.87786 | ACGTACCGCCTCCAG GGCCAAGT ACA ACTCAGCC TTTTTCTGGGCTTCC TP0975 1059207 - 1058383 - | hypothetical protein TERM 1230 1059087 - 1059103 + g 79 -12.3 -3.01791 | opp_overlap 1059084 1059081, overlap 1059089 AATGAGACAGGAGCG CACGCGT CCT ACGCGTG TCTTCACAGGCAACT TERM 1231 1059266 - 1059216 - H 95 -14.8 -3.55761 | overlap 1059217 1059220 TACCCACCGCGCAAA CCTACGCACCACCTGTTCCCTTGC GCA ACAAGGAAACAGGTGGTGCTCACT CAGAAAAACTTGGTA TERM 1232 1059265 - 1059217 - H 95 -18.3 -2.73243 | overlap 1059216 1059220 ACCCACCGCGCAAAC CTACGCACCACCTGTTCCCTTGC GCA ACAAGGAAACAGGTGGTGCTCAC TCAGAAAAACTTGGT TERM 1233 1059262 - 1059220 - H 100 -22.2 -2.64472 | overlap 1059217 1059216 CACCGCGCAAACCTA CGCACCACCTGTTCCCTTGC GCA ACAAGGAAACAGGTGGTGCT CACTCAGAAAAACTT TP0976 1059255 - 1060634 + | hypothetical protein TERM 1234 1061073 - 1061049 - g 75 -7.1 -4.3739 | overlap 1061054 1061072 GACGGTGGCAGAAAA CACCACCCCCT CTC AGGAGGCAATG CAGCAGCATGCAGCG TP0977 1060621 - 1061481 + | hypothetical protein TERM 1235 1061550 - 1061540 - g 74 -2.4 -5.07523 | opp_overlap 1061540, overlap 1061535 GATACAGAAAGAAAA GTGG ATC CCGC TTTTTGCCGCTGGAT TERM 1236 1061540 - 1061550 + G 72 -4.6 -4.60041 | opp_overlap 1061540 1061535 GATACAGAAAGAAAA GTGG ATC CCGC TTTTTGCCGCTGGAT lspA 1061478 - 1062071 + | signal peptidase II TERM 1237 1062562 - 1062574 + G 74 -3.3 -4.88067 | overlap 1062563 TACGGTGATAAACGC TCCCA GAT TGGGC TTTTTATCACTCAAT TP0979 1062241 - 1063014 + | hypothetical protein TERM 1238 1063586 - 1063546 - g 77 -12.5 -2.78384 | opp_overlap 1063574, overlap 1063527 1063559 1063560 GCGTGCGGCAGTAGA CGCAGGAGCACAAGCGC TTGCGTT GCACCCGCGCACCTGCG CGCAGTGTTACGCGG TERM 1239 1063761 - 1063771 + G 72 -4.6 -4.64861 | overlap 1063744 TTGCCCGCGGTGCTA TGGG CAA CCCG TTTATTTTCAGACAA TERM 1240 1063862 - 1063840 - g 72 -7 -4.2558 | gap 1, overlap 1063844 GACGTTTGAGCAAAA GCTACGCGC AGCCTG GCGCG-AGC TTCACCTTCTGGCAC TP0980 1063022 - 1064044 + | histidine phosphokinase/phophatase (ntrB) TERM 1241 1064093 - 1064075 - f 71 -4.5 -4.58685 | overlap 1064076 AAACCGCGTGAAAAA CGTACGC TTCCG GCGTACC CCAACTTACTTTGTC TERM 1242 1064420 - 1064436 + G 76 -9.4 -3.71649 | overlap 1064433 AAAAATTGTCTTTGA GCCGCA ATGTG TGCGGC TTTGACGTTTCCCAC TP0981 1064104 - 1065267 + | sensory transduction histidine kinase, putative TERM 1243 1065551 - 1065537 - g 81 -7.2 -4.5954 | GCAGACGATAGAAAA GAAGAT GGG ATCTTC TGAAATGCTGTTGTT TERM 1244 1065756 - 1065766 + G 76 -4 -4.91429 | CGCTCCTCTGCTCAT TGTA GGA TACA TTTTGTTTGAAATTT TP0982 1065283 - 1065909 + | glpG protein, putative TERM 1245 1066207 - 1066189 - g 70 -3.7 -4.6313 | opp_overlap 1066189 GCCAAAAGAAAAGAA GCGCGCC GTCAT GGAGCAC TTTACCCTCACTCCC TERM 1246 1066523 - 1066552 + G 81 -9.9 -3.86015 | opp_overlap 1066525 1066526, overlap 1066524 CTATACGTTAAAGAC AATCCCCGCCTCT TTGT AGAGGCGGGGGAA TTTGTCGCAGAGCTC TERM 1247 1066524 - 1066551 + G 82 -13.4 -2.91395 | opp_overlap 1066525 1066526, overlap 1066523 TATACGTTAAAGACA ATCCCCGCCTCT TTGT AGAGGCGGGGGA ATTTGTCGCAGAGCT TERM 1248 1066550 - 1066525 - g 100 -14.7 -3.83347 | opp_overlap 1066524 1066523, overlap 1066526 ATACGTTAAAGACAA TCCCCGCCTCT TTGT AGAGGCGGGGG AATTTGTCGCAGAGC TERM 1249 1066549 - 1066526 - g 100 -18.2 -2.89285 | opp_overlap 1066524 1066523, overlap 1066525 TACGTTAAAGACAAT CCCCGCCTCT TTGT AGAGGCGGGG GAATTTGTCGCAGAG TP0983 1065899 - 1066615 + | hypothetical protein TP0984 1068558 - 1066639 - | heat shock protein 90 TERM 1250 1068501 - 1068480 - G 75 -4.5 -4.82901 | opp_overlap 1068472 GTTCCCGGAGAAAAA TCTCTTTAT GGGA ATAGAGAGA ATGGATAATCAACGT TERM 1251 1069799 - 1069809 + G 74 -2.4 -5.15969 | opp_overlap 1069799 CGCTCGAGCACATGA GGCG CAC CACC TTTTTTGGCTTAAGG TERM 1252 1069947 - 1069983 + G 80 -13 -2.52623 | gap 1, overlap 1069946 1069944 1069979 GCCGATTGCCGGCAC CGC-GTGTGCTGCGTCG CACT CGGCGCAGTGCGCAGCG CTCTTATCAGGGACG TERM 1253 1069979 - 1070021 + G 74 -2.7 -4.97158 | overlap 1069947 1069946 1069944 1069984 1069985 ACTCGGCGCAGTGCG CAGCGCTCTTATCAGGG-ACG AGT CGTTCCCAGAGAAG-GAGTTG TTTTCTTTCGTGTGG TERM 1254 1070335 - 1070319 - g 77 -10.1 -3.58801 | overlap 1070321 ACAGAAGCGTTTAAA TACGGCG CGC CGCCGCA CGGCGGCATCGCACA TERM 1255 1070352 - 1070321 - g 83 -12.2 -3.36837 | gap 1, overlap 1070319 AGAAGCGTTTAAATA CG-GCGCGCCGCCGC ACG GCGGCATCGCACACG GGTTGGACCGCCTCG aspS 1068702 - 1070510 + | aspartyl-tRNA synthetase TP0986 1070566 - 1071450 + | hypothetical protein TP0987 1071666 - 1071496 - | hypothetical protein TERM 1256 1071825 - 1071839 + G 82 -9.2 -4.18018 | GCACGAAATGGGTAT CTGCGC GCG GCGCGG TTTTACATGCAGCGA TP0988 1071733 - 1072569 + | hypothetical protein TP0989 1073477 - 1072605 - | P26 TERM 1257 1072936 - 1072950 + g 70 -7.2 -4.11692 | CCATCGCGGTGATCG TAGCTT TCG AAGCTA TTTTCAGGATCGGTA TERM 1258 1073051 - 1073039 - G 76 -7.7 -4.2349 | opp_overlap 1073044 1073046 GCGCGATATGGAAAA GAACG GAG CGTTC AGTGAGATTCTGGGC TERM 1259 1073201 - 1073163 - G 72 -8.6 -3.76224 | CCCTGACGCAGTAAA CACGACGCAGCGCCCCTG AAT CCGAGGCGCTTCCACGCG GGAAATAGACTCGAT TERM 1260 1074012 - 1073998 - g 78 -5.6 -4.82901 | GTGCCCGGAGAAAAA GGTCTC CAG GAGTCC GCCGTGCAGGAGGAA TERM 1261 1076319 - 1076307 - g 72 -4.7 -4.60797 | opp_overlap 1076307 1076308 1076309, overlap 1076308 CCCCCACATAGAAAA GGCGG ACG CCGCG TTTGTTGATTTGTAC TP0990 1073524 - 1076625 + | hypothetical protein TP0991 1076689 - 1076847 + | rubredoxin TERM 1262 1076904 - 1076891 - g 100 -2.3 -5.81412 | overlap 1076892 TCCAGTGAAAAAAAA GGACG CTTT CGTCG GTACGATCGGCTACG TP0992 1076880 - 1077167 + | hypothetical protein TERM 1263 1077190 - 1077228 + T 100 -33.4 -3.57144 | opp_overlap 1077190 CTCCTTTGCTGAAGA TCCTGCACCCCCTCAGGC TTA GCCTGAGGGGGTGCAGGA TTTCCCACTACCAAC TERM 1264 1077228 - 1077190 - T 100 -33.4 -3.01712 | opp_overlap 1077190 CTCCTTTGCTGAAGA TCCTGCACCCCCTCAGGC TTA GCCTGAGGGGGTGCAGGA TTTCCCACTACCAAC TP0993 1078260 - 1077304 - | rare lipoprotein A, putative TERM 1265 1078675 - 1078657 - g 77 -6.7 -4.51743 | gap 1, opp_overlap 1078669 TTATCAGGAAAGAAA GGCTCTGC TCCT GCAG-GCC TGCGCGGGGCGCTCG TERM 1266 1078914 - 1078886 - g 79 -10.3 -3.74224 | opp_overlap 1078887, overlap 1078887 1078889 TGCAAAGCACGGAAA GGATCTGGTGTGC GCG GTACACCAGATCT TGATGCAGAGGAGTA TERM 1267 1078913 - 1078887 - g 86 -13.8 -2.84053 | opp_overlap 1078887, overlap 1078886 1078889 GCAAAGCACGGAAAG GATCTGGTGTGC GCG GTACACCAGATC TTGATGCAGAGGAGT TERM 1268 1078887 - 1078913 + G 100 -16 -3.14211 | opp_overlap 1078887 1078886 1078889 GCAAAGCACGGAAAG GATCTGGTGTGC GCG GTACACCAGATC TTGATGCAGAGGAGT TERM 1269 1078911 - 1078889 - g 71 -10.6 -2.96232 | opp_overlap 1078887, overlap 1078887 1078886 AAAGCACGGAAAGGA TCTGGTGTGC GCG GTACACCAGA TCTTGATGCAGAGGA TP0994 1078616 - 1079425 + | hypothetical protein TERM 1270 1079618 - 1079593 - g 75 -12 -2.98942 | opp_overlap 1079584 1079597 1079599, overlap 1079595 ACGCGTGGATATACA CATTCAGACG CTCTCT CGTCTGAATG AGATAGCATCCGTTT TERM 1271 1079597 - 1079630 + G 75 -4.5 -4.74103 | opp_overlap 1079595 1079593, overlap 1079584 1079599 GTGGATATACACATT CAGACGCTCTCTCGT CTGA ATGAGATAGCATCCG TTTTTCGCTTCGAGA TERM 1272 1080344 - 1080327 - g 71 -2.7 -4.84359 | overlap 1080337 GTATGGGCATAAAAA TGACAGA AATT TTTGTCA AAAGGCTCAGCTATA TP0995 1079501 - 1080787 + | cyclic nucleotide binding protein TP0996 1082486 - 1080870 - | hypothetical protein TERM 1273 1081310 - 1081293 - G 72 -4.9 -4.63218 | CGGCTCCCAACAAAA TCCTATG TCCC CATAAGA AGGCAACAGCACCAC TERM 1274 1082665 - 1082612 - R 76 -9 -4.01158 | gap 3, opp_overlap 1082648 1082660, overlap 1082609 AACCGTAGCAAACAA CGCTGCGCTCG-ATCAAGCGTAG-CAG TGC CCGTCAACGCC-AATGCAAGCGCAGCG GCTCATATACGTAGG TP0997 1084439 - 1082643 - | protease IV (sppA) TERM 1275 1084193 - 1084181 - G 76 -7.7 -4.14977 | opp_overlap 1084181 1084180 TAATATCAGAAAGAA GGATC GCC GATCC CTTTGGGTTCAAGAA TP0998 1085975 - 1084473 - | sodium/proton-dependent alanine transporter TERM 1276 1084737 - 1084727 - G 70 -5.4 -4.35581 | opp_overlap 1084727 TGAAAACACTCAAAA CCAT TTT ATGG TCCTTAATGAAACGT TERM 1277 1084942 - 1084930 - G 70 -4.1 -4.71186 | AGCAGCAACACAAAA GCAGT CAC ACTAC AAATTAGCATCGTGT TERM 1278 1085177 - 1085157 - G 77 -3.1 -5.12707 | overlap 1085159 GCAAATTTCAAAAAA GAGCGCAGG GAG CCTGTACAC ATTGAGTGCCAACAC TERM 1279 1085558 - 1085544 - G 72 -7.8 -3.86897 | CGTACTTTCGACAAA GGCACT TGC AGCGCC AAAAAAGGCACTCAC TERM 1280 1086678 - 1086697 + G 81 -5 -5.04601 | gap 1, opp_overlap 1086646 1086645, overlap 1086646 1086672 AATTCTCCACGGAAG TTC-CCCTC CAG GGGGGAGAA TTTTTGATTTCTGAG TERM 1281 1087342 - 1087328 - g 91 -11.4 -4.08767 | CCCATTCCTGGAAAA CACGCC ATA GGCGTG GAAGTCCCTAACAAA TERM 1282 1087632 - 1087611 - g 75 -5.2 -4.67353 | overlap 1087613 TCATTGATCCAAAAA TCGTAGAG TTAAAG CTCTACAA CGATATCGCCCACCT TERM 1283 1087802 - 1087791 - g 79 -2.2 -5.28755 | AAATACAGGAAAAAA GCAT CGCC ACGC AGCCTCTCCCATTCA TP0999 1086047 - 1088446 + | cell division protein, putative TERM 1284 1088492 - 1088473 - f 71 -4.2 -4.63218 | opp_overlap 1088438 1088485, overlap 1088477 CTGCGTGTAAGAAAA CGACGAAC GATT GTTCAACG GACTTTTTGAAACTG TP1000 1088624 - 1089295 + | hypothetical protein TERM 1285 1089446 - 1089461 + T 90 -4.7 -5.40072 | AGAGCTATTGATTTG GCAAC CCCATC GTTGC TTTTTTTAGCACAAA TP1001 1090616 - 1089435 - | hypothetical protein TERM 1286 1089494 - 1089478 - G 77 -7.3 -4.46212 | opp_overlap 1089486, overlap 1089483 TTTTTTAGCACAAAA CAATCTG CCG CAGATCG GCCTGCGCCCCGTTT TERM 1287 1089642 - 1089675 + g 74 -2.3 -5.09895 | gap 1, overlap 1089643 GGCAGCTTCAATTTC TGGAAAAGC-CCAGCG AAA CGTCGGCGCCTTTCCC TTTTTTACGTGGGTA TERM 1288 1090154 - 1090170 + g 70 -5.7 -4.36914 | CACGCAATACCACCT GCTGCCC CAC GTGCGGC TTTTGTAAAAAGCGC TERM 1289 1090573 - 1090560 - G 72 -4.5 -4.72272 | opp_overlap 1090560 CTCCCTCACCAAAAA TAGGC TAAC GCCCA TTATATCACACGTAA TP1002 1091298 - 1090630 - | hypothetical protein TERM 1290 1092211 - 1092199 - g 90 -4.7 -5.4505 | overlap 1092200 1092207 CTGGTGAAGAAAAAA CGCTC AAA GTGCG CAGCTCCGCCCACAG TERM 1291 1092272 - 1092299 + G 73 -4 -4.82901 | GAACTTCACGTTCTA CTACGGGAGTCA CGCG TGGCACCGGTGG TTTTTCTGGACAACG TP1003 1091493 - 1092530 + | hypothetical protein TP1004 1093158 - 1092553 - | recombination protein (recR) TP1005 1094950 - 1093232 - | DNA polymerase III subunits gamma and tau TP1006 1096922 - 1095009 - | DNA gyrase, subunit B (gyrB) TERM 1292 1095848 - 1095834 - G 77 -10 -3.63922 | overlap 1095832 ATTTTGCTCAAAATA GAGCGT CAG ACGCTC CCCCACCAAAGAATC thyX 1097948 - 1097031 - | FAD-dependent thymidylate synthase TERM 1293 1097307 - 1097291 - G 79 -2.3 -5.25735 | GCAAAAAATGAAAAA GATTG TGTAAAT CAATC TGCCAATACCACTCG TERM 1294 1097395 - 1097408 + g 78 -9.5 -3.97834 | opp_overlap 1097385 1097386 ATCAATGCGTCGTAA GCGGC ACAC GCCGC TTTCTGCTGAGCTTC TP1008 1100528 - 1097991 - | ribonucleotide-diphosphate reductase subunit alpha TERM 1295 1098259 - 1098272 + g 81 -6.7 -4.72007 | opp_overlap 1098250 GAAGGAGCTACGCGT GGCAT TAGC ATGCC TTTCTTTTCCTCGAG TERM 1296 1100030 - 1100015 - G 79 -10.4 -3.72027 | opp_overlap 1100014 AGCGCGCAGCAATAA GCTCCC ACTG GGGAGC CTCTTGGGCAGTCAG gpsA 1101725 - 1100655 - | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase TERM 1297 1100864 - 1100850 - G 72 -6.4 -4.4009 | opp_overlap 1100829, overlap 1100833 1100855 CTGTATTCCAGAAAA GGAATC AAG GATCCC CTTATGCACTATGTC TP1010 1102271 - 1101822 - | nucleoside-diphosphate kinase (ndk) TP1011 1103005 - 1102397 - | peptidyl-tRNA hydrolase TERM 1298 1102775 - 1102763 - G 70 -4.8 -4.56775 | ATCCGTCTGCAAAAA GGCA CATGC TGCC CCTACGCTTTTCCCA TP1012 1103975 - 1103040 - | RNA polymerase sigma-43 factor (sigA) TERM 1299 1103781 - 1103766 - G 75 -6.8 -4.35091 | opp_overlap 1103777, overlap 1103767 AACACTGATAACAAA GCGTAC GTTT GCACGC ACGAGCGCGTTTTTA TERM 1300 1103777 - 1103790 + g 73 -3.7 -4.74103 | opp_overlap 1103766 1103767 CAAAGCGTACGTTTG CACGC ACGA GCGCG TTTTTAGCTTGCGCA groES 1104180 - 1104446 + | co-chaperonin GroES TP1014 1106391 - 1104457 - | hypothetical protein TERM 1301 1104678 - 1104689 + gT 70 -3.6 -4.64676 | overlap 1104654 CAAGCACAAAGTGTT CTGC AGCC GCGG TTTTCTTGCCCATCC TERM 1302 1105392 - 1105379 - GT 78 -5.9 -4.72986 | opp_overlap 1105379 TACGCGTACCAAAAA GCACG TGCA CGCGC TCTATCCCCTCCATC TERM 1303 1105425 - 1105412 - GT 74 -9.5 -3.64703 | TCCCCTCCATCGAAA GCGGC ATCT GCCGC TAACAGCAAGTGAGT nusB 1106782 - 1106357 - | transcription antitermination protein NusB TP1016 1107864 - 1106779 - | basic membrane protein (tpn39b) TERM 1304 1106870 - 1106883 + g 77 -3.1 -5.16151 | gap 1 GACACTTCCCGGATA GCG-TC CTC GAGCGC TTTTTGTTGGATTTG TERM 1305 1107678 - 1107694 + g 93 -12.3 -3.9578 | CCATGAATTGTCTAC GCTCAGC AGT GCTGAGC TTCTTTCCCATCTCT TP1017 1109754 - 1107937 - | alanyl-tRNA synthetase TERM 1306 1108647 - 1108666 + g 86 -12.2 -3.56092 | CCTTCCTGAGGGCGT CGAGGAAC TTAC GTTCCTCG TTTGCAAGCTCCTGC TERM 1307 1109653 - 1109637 - G 81 -6.5 -4.78107 | CAGCAGTAGTAAAAA GCACGGT AGG ATCGTGC TCGGGCACAAGGGAC TERM 1308 1110096 - 1110084 - g 71 -2.7 -4.74504 | AGCTGAATCCAAAAA GAAAA GCA TTCTC CTTGAAGCAAAAGAA TERM 1309 1110213 - 1110202 - g 74 -5.8 -4.56597 | CGCCTTCTTCAAAAA GAGG AAGC CCTC TCTACGCGCGCGGGG TERM 1310 1110278 - 1110259 - g 74 -7.8 -4.12902 | opp_overlap 1110263 GAACGATCGCTAAAA CAGCGGGA TCAG TCCCTCTG TCAAGAAGAGGCCCG TERM 1311 1111325 - 1111313 - g 75 -5.5 -4.61747 | TGAACAACGATAAAA TCCCC GAC AGGGA CGTGAAGGCACTTGG TP1018 1109926 - 1111440 + | hypothetical protein TP1019 1111462 - 1111905 + | Glu-tRNA amidotransferase, subunit C (gatC) TERM 1312 1112289 - 1112303 + G 73 -11.4 -2.62983 | CACCGTTGTTGCGCG CCTGCG CGC CGCAGG TGCTATCCCGCTCGG TERM 1313 1112700 - 1112732 + G 73 -4 -4.82901 | overlap 1112699 CCCCCCTCCTGCGAC GGGGCGACACGCTG TGTCT CACCATCTTGCCCC TTTTTCTGCCCACGA TP1020 1111906 - 1113426 + | Glu-tRNA amidotransferase, subunit A (gatA) TERM 1314 1113898 - 1113882 - g 78 -8.7 -4.20084 | AGGACGCAGGCAAAA GCCTGCA TGC TGCAGAC GCTTACAGCTATATT gatB 1113419 - 1114948 + | aspartyl/glutamyl-tRNA amidotransferase subunit B TP1022 1116411 - 1115044 - | DNA repair protein RadA TERM 1315 1115604 - 1115581 - G 91 -3.1 -5.5112 | gap 1, overlap 1115583 GGTACTAATAAAAAA TCCTGCAGTG TCCTG CACAGC-GGA AAGTCCATTTTCACC TERM 1316 1116221 - 1116198 - G 71 -9.6 -3.4878 | gap 1, overlap 1116200 CGATACCACAACTAA TACGCTGCGCA TCC TGCGC-GCGCA CAGCACACAGCGGGA TERM 1317 1116219 - 1116200 - G 72 -10 -3.31184 | gap 1, overlap 1116198 ATACCACAACTAATA CGCTGCGCA TCC TGCGC-GCG CACAGCACACAGCGG recX 1116952 - 1116458 - | recombination regulator RecX rpsI 1117469 - 1117080 - | 30S ribosomal protein S9 rplM 1117913 - 1117485 - | 50S ribosomal protein L13 TERM 1318 1120076 - 1120095 + G 74 -10.7 -3.1506 | AACACTCGCTTCCTG CCGTGCG TATTTT CGCACGG TTGGTGACCGCCTTT TP1026 1118346 - 1120115 + | oligoendopeptidase F, putative TERM 1319 1120805 - 1120783 - g 70 -4.1 -4.68424 | overlap 1120785 GAACTCACGCAAAAA TGGCACGCA TGGAT TGCATGCAA CACACTCGCATCCGA TP1027 1120237 - 1121013 + | uridine phosphorylase (udp) TP1028 1123041 - 1121029 - | DNA helicase II (uvrD) TERM 1320 1122114 - 1122127 + g 100 -3.1 -5.81412 | CAATCAGCGCCTTTC CTAAG CGGT CTTGG TTTTTTTTCACTACC TERM 1321 1122831 - 1122852 + g 70 -6.5 -4.2461 | gap 1, opp_overlap 1122819 CAAGCGCGCAGGCAC GCGTGCGCAT CTC ACGCGC-CGC TTTATTGGTAAAGGT TP1029 1123810 - 1123124 - | hypothetical protein TERM 1322 1123702 - 1123687 - G 74 -6 -4.56597 | overlap 1123689 CGCTCTTGCGAAAAA GGCGCC GATA GGCGTC GAGCACGCGGGGGTC TERM 1323 1123708 - 1123725 + g 85 -6.9 -4.84529 | GATAGGCGTCGAGCA CGCGGGG GTCT TCCTGCG TTTTTACGTTTCTGA TP1030 1124326 - 1123829 - | hypothetical protein TERM 1324 1123903 - 1123868 - G 100 -13.2 -4.25104 | gap 1 GCGGTGCCATGAAAA CGGGCA-CGTGCGCTGC GCT GCAGCGCGCGGCGCACG GGGCGATACAAAACT TERM 1325 1123993 - 1123948 - G 75 -11.8 -2.92513 | gap 1, opp_overlap 1123980 AGAATTGCAAGTATA GCGCGCCCC-CACCCCCCT GTCTACCTG AGGAGGGGGCGGGGCGTGC GGCGGTGACGCACCC TERM 1326 1124089 - 1124105 + g 100 -5.1 -5.60993 | opp_overlap 1124091, overlap 1124091 AATGGGTCGGGAGGG AACTGCA CCG TGCAGTC TTTTTTTGTGCGGGC TERM 1327 1124091 - 1124103 + g 82 -7.7 -4.45201 | opp_overlap 1124091, overlap 1124089 TGGGTCGGGAGGGAA CTGCA CCG TGCAG TCTTTTTTTGTGCGG TERM 1328 1124180 - 1124219 + g 83 -12.1 -3.27525 | opp_overlap 1124193 TGAGCAGCTAGGCAT TGCCCCGCAGTAACTGG TCACGC CCAGCTGCAGTGGGGCA TTAAGTTTAAAAAGA TERM 1329 1124260 - 1124233 - G 75 -5.6 -4.67904 | gap 1, overlap 1124236 1124237 CATTAAGTTTAAAAA GAACCC-TTCGGT GCA ACCGAACGAGTAC ACGCACGGGTTTCGC TERM 1330 1124256 - 1124236 - G 74 -6.1 -4.44355 | overlap 1124233 1124237 TAAGTTTAAAAAGAA CCCTTCGGT GCA ACCGAACGA GTACACGCACGGGTT TERM 1331 1124877 - 1124854 - g 86 -6.6 -4.94902 | overlap 1124845 CAATGAGCAGAAAAA CCGCCTGC TGTGGAGC GCCGGCGG ACGGCTGACGCTGAC TERM 1332 1125096 - 1125086 - g 71 -2.4 -5.00616 | overlap 1125087 TTTTTTGTCAAAAAA GTGC GGG GCGC TGCCCTCATAGCGCA TERM 1333 1125240 - 1125229 - g 77 -7.2 -4.57569 | CGAGCTCCTTAAAAA GCCG GACC CGGC CATTGCGCTCGTCAC TP1031 1124354 - 1125898 + | TPR protein L (tprL) TP1032 1126400 - 1125966 - | hypothetical protein TERM 1334 1126093 - 1126135 + g 78 -9.2 -3.87583 | gap 3 GCGATGCACGTGCCG TTCGCGCACGGCGAGCGGCAC ACCC GGGCTGC-C-CCG-GCGCGAA TTTCAATTTCCGTTT TP1033 1127347 - 1126412 - | hypothetical protein TP1034 1127421 - 1128446 + | hypothetical protein valS 1131313 - 1128443 - | valyl-tRNA synthetase TERM 1335 1129770 - 1129782 + g 76 -9.1 -3.72576 | GTGGGGTAAAACGCG CGCAG CTT CTGCG TTTCCTGAGGCCACC TERM 1336 1132503 - 1132474 - g 81 -6.4 -4.83169 | opp_overlap 1132460 1132474 ATTCCGGTAGAAAAA GGACGCGGAGAT TCCGTC ATTTCTGCGTCC TTAGTCAGCACGGGG TERM 1337 1132474 - 1132503 + G 74 -10.8 -3.14132 | opp_overlap 1132474, overlap 1132460 ATTCCGGTAGAAAAA GGACGCGGAGAT TCCGTC ATTTCTGCGTCC TTAGTCAGCACGGGG TP1036 1131466 - 1133844 + | cation-transporting ATPase, P-type TERM 1338 1133924 - 1133904 - T 74 -9.8 -3.75884 | opp_overlap 1133904 1133903 1133915, overlap 1133900 GCGCAAAGAAACGAA CCTCCTAT CTATC ATAGGAGG CTTATGGATTTAAAA TP1037 1134650 - 1133934 - | hemolysin III (hlyIII) TERM 1339 1134740 - 1134708 - R 71 -10.6 -3.24825 | opp_overlap 1134707, overlap 1134706 GCACTTCAACCAACA CCTCCCTCCCCTCA TGCTG TAACGGGAGAGAGG CCTTATGTGCAAAAT TP1038 1135342 - 1134809 - | bacterioferrin (TpF1) TERM 1340 1135286 - 1135315 + g 93 -3.5 -5.51402 | gap 1, overlap 1135288 1135290 1135291 GGGGGCGCTGGCTCC AACTGCAGCGCTCG TGG CG-GTGCTGTGGTA TTTTTTTCCATCTGT TERM 1341 1135288 - 1135313 + g 72 -6.1 -4.38666 | gap 1, overlap 1135286 1135290 1135291 GGGCGCTGGCTCCAA CTGCAGCGCTCG TGG CG-GTGCTGTGG TATTTTTTTCCATCT TERM 1342 1135480 - 1135504 + H 86 -6.6 -5.00616 | gap 1, overlap 1135472 ATTTATTTTCACCGA GATTTCG-TGA AGTT TCAGCGAAATC TTTTTTCCAGGAGAC TP1039 1135569 - 1136141 + | adenine phosphoribosyltransferase TP1040 1137219 - 1136164 - | lysyl-tRNA synthetase (lysS-2) TERM 1343 1137023 - 1137012 - G 81 -5.8 -4.82901 | GCGGTTTCAGAAAAA CCTC AGGA GAGG GAACGAGATATAACT TERM 1344 1137196 - 1137167 - G 93 -6.3 -5.26875 | overlap 1137168 TGTTCAAGGAAAAAA TCACGCACTGCAC GCAA GCACTGCGCGCGA AAGAGGACAGATTCG clpP 1137932 - 1137219 - | ATP-dependent Clp protease proteolytic subunit TERM 1345 1137354 - 1137382 + g 72 -6 -4.38712 | opp_overlap 1137364, overlap 1137355 CACACCCGTTTCACT TGCGATCAAAGC GTTCA GTTTCGATCGCG TTTTCTCAAGCTCCC TERM 1346 1137529 - 1137512 - G 76 -7.7 -4.25104 | TTGCCGCGAGCAAAA CGAGTAC ACCA GCACTCG CAACCAACCCCATTC