TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.47311 %AT, 1024504 nt, 10373 terms. Intergenic: 0.46178 %AT, H2T: 147555 nt, 774 terms; T2T: 37721 nt, 412 terms; H2H: 56912 nt, 424 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|189025236|ref|NC_010741.1| Treponema pallidum subsp. pallidum SS14, complete genome (length 1139457) TERM 1 327 - 315 - g 71 -3.4 -4.84359 | opp_overlap 315 CTACCTGGAGAAAAA CTCT CCTGC AGAG GTTCCTTCCAAAAAG TERM 2 652 - 639 - g 75 -5.2 -4.69028 | opp_overlap 643 TTTTAAAAAAAAATA CCGC TACACC GCGG ATGTACTTCTTATAG dnaA 4 - 1398 + | chromosomal replication initiation protein DnaA TERM 3 1971 - 1984 + GF 75 -6.7 -4.323 | opp_overlap 1969 1970 TTTCAGCTCAGAACC CTCTC GCAT GAGAG TTTTCCATGTTTCCC TERM 4 2204 - 2189 - gf 100 -9 -5.76633 | opp_overlap 2202 CTATATAGAAAAAAA GGGAGA ATCC TCTCCC CAATCCTTTTCGGGT dnaN 1641 - 2756 + | DNA-directed DNA polymerase beta subunit TERM 5 2825 - 2836 + GF 100 -5.8 -5.93809 | opp_overlap 2824 ACACGATTGATATAT CCTC TCCT GAGG TTTTTTTTGTGGGAA recF 2623 - 3834 + | recombination protein RecF TPASS_0004 3827 - 4264 + | hypothetical protein TERM 6 4675 - 4686 + G 71 -3 -4.77896 | overlap 4679 TGACGCGCTAGTGCG TCTT GGGC AAGA TTTTTCCCTTCGTTA TERM 7 4834 - 4822 - g 95 -6.3 -5.40625 | opp_overlap 4822 AGAGGACATAAAAAA GGAAA CGG TTTCC TTTGTTCCCAATTTT TERM 8 4822 - 4834 + G 70 -6.3 -4.19974 | opp_overlap 4822 AGAGGACATAAAAAA GGAAA CGG TTTCC TTTGTTCCCAATTTT TERM 9 4883 - 4893 + G 80 -5.4 -4.89477 | overlap 4877 4876 CCCACGGTTCTTCCT GGAA GGT TTCC TTTTCTTCTTGCGAA gyrA 4391 - 6832 + | DNA topoisomerase (ATP-hydrolyzing) subunit A TPASS_0006 7014 - 7967 + | protein Tp75 TPASS_0008 7991 - 8260 + | hypothetical protein TERM 10 9686 - 9725 + F 91 -7.8 -5.01422 | opp_overlap 9688 9700, overlap 9687 9688 9711 TTTCCAATAGTGAGA TATGCGCCGTAGAAGCGA AGGG TCGCTTCTACGGAGAAGC TTTGTTTTTCTGTGG TERM 11 9687 - 9724 + F 77 -11.3 -3.59226 | opp_overlap 9688 9700, overlap 9686 9688 9711 TTCCAATAGTGAGAT ATGCGCCGTAGAAGCGA AGGG TCGCTTCTACGGAGAAG CTTTGTTTTTCTGTG TERM 12 9688 - 9723 + F 83 -14.8 -2.73909 | opp_overlap 9688 9700, overlap 9687 9686 9711 TCCAATAGTGAGATA TGCGCCGTAGAAGCGA AGGG TCGCTTCTACGGAGAA GCTTTGTTTTTCTGT TERM 13 9723 - 9688 - f 86 -14.8 -2.9518 | opp_overlap 9688 9687 9686 9711, overlap 9700 TCCAATAGTGAGATA TGCGCCGTAGAAGCGA AGGG TCGCTTCTACGGAGAA GCTTTGTTTTTCTGT TERM 14 10137 - 10110 - f 86 -7 -5.09245 | GTAAAAGTATAAAAA TGCACGAGCCTA ACAC TAGACGCATGCA TACAGTAGTGTACCG TERM 15 10352 - 10337 - g 91 -3.2 -5.49729 | AAGTAGTGAAAAAAA TTACCG CTGA CGGGAA AAAATGTTGATCGTG TPASS_0010 10237 - 10362 + | hypothetical protein TERM 16 11093 - 11054 - g 82 -9.4 -4.23758 | gap 1, overlap 11089 ACGGTATATGGAAAA GTGCTCCTTC-TGTCACCT CTA AGGTGAAAGGAAAGGGCAC CAATAGTCGGCGCAT tprB 10396 - 12378 + | protein TprB TPASS_0012 12372 - 12545 + | hypothetical protein TERM 17 13059 - 13076 + GF 71 -3.3 -4.73614 | CAAAGAAAATGGGCG CGCGTAC GTTG GTGCACG TTTCTTTTCCTCGTC TPASS_0013 12542 - 13207 + | hypothetical protein TERM 18 13265 - 13277 + GF 70 -6.3 -4.15833 | CGGTAAGTATGGGAA GAACA CTA TGTTC TTTTGCACTAATGAT TPASS_0014 13164 - 13772 + | hypothetical protein TERM 19 14915 - 14937 + GF 90 -6.9 -5.07652 | overlap 14905 GTTTTGACACCCCAT GGGGGAGGT CTGTT ACTACCCCC TTTTATTTTCAAGAA pheT 13963 - 15777 + | phenylalanyl-tRNA synthetase subunit beta TERM 20 16578 - 16568 - gf 78 -2.4 -5.14563 | opp_overlap 16568 GCCTGTATTAAAAAA CGCG TGG CGTG TTATGCACCGGTTTT TERM 21 16700 - 16689 - gf 70 -5.8 -4.21319 | opp_overlap 16668 16663 ATGAATTTGAAGAAA TGCG TGCG CGCA TCATATCGTACATAG TERM 22 17510 - 17529 + GF 74 -7.8 -4.08945 | overlap 17511 CGCAGGCAGTACGTG TGTTCCCG CGCG CGGGAGCG TTTTCAGCGCATGAT lon1 15740 - 18313 + | ATP-dependent protease LA TPASS_0017 18401 - 19348 + | hypothetical protein TERM 23 20011 - 20001 - g 73 -4 -4.81212 | GTGAGCAGAAGAAAA TTTC AGA GAAA CTGGGAGAAGGGCGC TERM 24 20647 - 20676 + G 71 -2.9 -4.85599 | gap 1, opp_overlap 20646 20647, overlap 20649 TTTGAAAGAAAGTAC TGGAT-TTGCTGCG AAT CCCAGCAATATCGA TTTTTATACGGTGCG TPASS_0018 19415 - 21388 + | transcription elongation factor greA 21555 - 22043 + | transcription elongation factor GreA TERM 25 22415 - 22434 + G 73 -9.3 -3.64703 | opp_overlap 22403 ACAGCGCTAGATTTC GCGCGTA CACACT TACGCGC TTTGCCTGCAGCACA TERM 26 23212 - 23223 + G 100 -4.4 -5.4833 | overlap 23211 CGGTGCACGCGCGAT GTTG CGAA CAAC TTTTTTATTACCTAA TPASS_0020 22043 - 24166 + | protein 76K TERM 27 24263 - 24243 - f 73 -6 -4.49756 | overlap 24244 GGGGAAAGATGAAAA CCGGGGCG GATCG CGCACCGA AGCGTCCCCCTACCG TPASS_0021 25104 - 25370 + | hypothetical protein TERM 28 25548 - 25574 + GF 79 -4.4 -4.98255 | opp_overlap 25547 25548 25550, overlap 25550 CTCTGTTGCAAAAAG CATTGAGTACGG TAG CTGGACTCAATC TTTTTCTCATTCCGC TERM 29 25550 - 25572 + GF 70 -7 -4.11322 | opp_overlap 25550 25547 25548, overlap 25548 CTGTTGCAAAAAGCA TTGAGTACGG TAG CTGGACTCAA TCTTTTTCTCATTCC TERM 30 25611 - 25594 - gf 91 -11.3 -4.09685 | TCTCATTCCGCAAAA GCGGATG CGTC CATCCGC ACAGTTATTGACAAC TPASS_0022 25325 - 27493 + | hypothetical protein TPASS_0023 27554 - 28885 + | sodium- and chloride- dependent transporter TPASS_0024 29065 - 29775 + | hypothetical protein TPASS_0025 32925 - 29854 - | hypothetical protein TERM 31 30669 - 30681 + g 72 -4.8 -4.72272 | overlap 30661 CACATCCGATCACTC CTGC AGTGA GCAG TTTTTCATGCAGCGC TERM 32 30967 - 30936 - G 95 -10.2 -4.65933 | overlap 30966 TATCTGTAAAAGAAA GACTGCGCACGTGT GCAC ACACGTACGAAATC GCCTGTACGATAAAG TERM 33 31472 - 31497 + g 71 -2.5 -4.99861 | overlap 31474 31475 GCTGCTGGCTGCGTG AGTGTACGGGA GAAA TCCTGTACGTA TTTTTCTAATTGCTC TERM 34 31474 - 31495 + g 70 -7.3 -4.11322 | overlap 31472 31475 TGCTGGCTGCGTGAG TGTACGGGA GAAA TCCTGTACG TATTTTTCTAATTGC TERM 35 32230 - 32208 - G 77 -10 -3.67737 | opp_overlap 32208 32207 32205 CAGAAAATTTTGAAA GGCATTTATC CTC AATAAATGCC ATCTGTTTTTCGGTG fliG1 33976 - 32954 - | flagellar motor switch protein TERM 36 33063 - 33083 + g 100 -13.3 -4.58283 | overlap 33064 AACGTGTCGTACTCA TCGCGCACA AGC TGTGCGCGG TTTTTAGAGAGATTA TERM 37 33064 - 33082 + g 100 -14.6 -3.34488 | overlap 33063 ACGTGTCGTACTCAT CGCGCACA AGC TGTGCGCG GTTTTTAGAGAGATT TERM 38 34076 - 34045 - H 81 -12.2 -3.48276 | overlap 34064 34065 GTGCTCTTGACACAA GGGCGTGAGCACCT TAAA AGGTGCCCCCCCCC AGCGGGGAGGGGTCC TERM 39 34091 - 34064 - H 88 -11.2 -4.15565 | gap 1, overlap 34045 34065 GTGAGCACCTTAAAA GGTGCCCCCCCCC AGC GGGGAGGGGT-CC AAGGATGTATGGCGT TERM 40 34091 - 34065 - H 72 -11.4 -3.09018 | overlap 34045 34064 TGAGCACCTTAAAAG GTGCCCCCCCCC AGC GGGGAGGGGTCC AAGGATGTATGGCGT TPASS_0027 34202 - 35425 + | possible hemolysin TPASS_0028 35439 - 36800 + | possible hemolysin murA 36908 - 38185 + | UDP-N-acetylglucosamine 1-carboxyvinyltransferase groEL 38304 - 39938 + | heat shock protein GroEL TERM 41 40231 - 40243 + G 81 -6.9 -4.64076 | GTTTCCTTGTTTCAG GCCTG TCT CGGGC TTTTCTGGTTTACTT TPASS_0031 40002 - 40280 + | hypothetical protein TPASS_0032 41077 - 40277 - | hypothetical protein TERM 42 40307 - 40326 + g 82 -2.1 -5.45802 | ACTTATGGGCGAAGA TCTCTTG CCTGGC CGAGGGA TTTTTCTTTTCCACG TERM 43 40669 - 40692 + g 74 -2.4 -5.1287 | gap 1, overlap 40670 40672 CTCCTGCCTGTTCTA GGC-CACGTAT GAG GTACGTGTGCA TTTTTTCCATGTGAG TPASS_0033 41685 - 41074 - | hypothetical integral membrane protein TPASS_0034 42736 - 41786 - | ABC transporter, periplasmic binding protein TERM 44 41849 - 41867 + g 82 -11.8 -3.54622 | AATGTTGTGTTTCAT CCTTTCGT AGT ACGAAAGG TTCTCCTCGTTTTTT TERM 45 42714 - 42697 - G 90 -6.9 -5.06414 | CCTGTGCAAGAAAAA CCACCCC CGCA AGGGCGG CAACTACTGAGCAGC TPASS_0035 42934 - 43650 + | ABC transporter, ATP-binding protein TERM 46 43672 - 43687 + G 70 -5.4 -4.35042 | AGTACGCATTTATGC GCAACG CTTT TGTTGC TTCTTTTCTCATAGC TERM 47 43824 - 43835 + G 100 -4.4 -5.81412 | overlap 43815 TGCGGCATCCATCCA GGAT GGGG ATCC TTTTTTTTCACTGCC TPASS_0036 43650 - 44450 + | ABC transporter, permease protein TPASS_0037 45554 - 44559 - | D-specific D-2-hydroxyacid dehydrogenase TERM 48 45272 - 45285 + g 70 -4.5 -4.57341 | gap 1 ACGGTACGTTCGTCA GC-CGG ATG CCGTGC TTTTTCAGCAAAGTT pfoS/R 46703 - 45651 - | regulatory protein PfoS/R TERM 49 46620 - 46599 - G 93 -12.9 -3.61894 | overlap 46577 46600 AAGCGCTCTGAACAA CTCCCCCGC GATA GCGGGGGGG ACAAGACCGATGACG TERM 50 46621 - 46600 - G 73 -11.5 -2.76815 | overlap 46577 46599 AGCGCTCTGAACAAC TCCCCCGCG ATAG CGGGGGGGA CAAGACCGATGACGA TPASS_0039 46752 - 46910 + | hypothetical protein TERM 51 47225 - 47213 - f 76 -10.5 -3.72576 | opp_overlap 47222 TCCCTGTGGACCAAA CCGCG GGG CGCGG TTCAGATACCCGCTA mcp1 47588 - 49381 + | methyl-accepting chemotaxis protein TPASS_0041 49383 - 49505 + | hypothetical protein TERM 52 49619 - 49630 + G 83 -5.8 -5.01732 | GACCAACAGTCTCGT GCTC TTTT GAGC TTTTTTAAACGGGTT TPASS_0042 49502 - 50434 + | hypothetical protein TERM 53 51776 - 51802 + G 72 -4.4 -4.63218 | gap 1, opp_overlap 51776, overlap 51776 AGAGGCTTTGTATAA GG-TGCGGAGT AAGAGA ACACCGCATCC TTTTCTTACCCCCGA TPASS_0043 50415 - 52547 + | possible soluble lytic transglycosylase TERM 54 52875 - 52849 - g 75 -5.1 -4.63932 | gap 2, overlap 52850 52851 GACTGCTCAACAAAA GCCGGGGCCCTGC AGT GCAGG-CGCCG-C GTATCCAAGCAGATA TERM 55 53276 - 53293 + G 71 -2.6 -5.01811 | opp_overlap 53267, overlap 53267 53277 GGAAAAGCAAGAAGC CGACGC TATCAT GCGTCC TTTTTCCTTTGCTCA gidA 52587 - 54479 + | glucose inhibited division protein A TERM 56 54489 - 54473 - T 83 -12.3 -3.64703 | GCTCGCCCACTTAAA GCGGTAG CAG CTACCGC AGAGATAGAAGAACC TPASS_0045 55434 - 54535 - | possible adenosine deaminase TERM 57 54877 - 54888 + g 79 -3.6 -5.0666 | overlap 54874 CGCATCAGAGAACTC GCCT ACGT GGGC TTTCTTTTTTAAGTG TPASS_0046 56497 - 55796 - | hypothetical protein TERM 58 56355 - 56328 - G 72 -5.5 -4.4891 | GGTACCACGACAAAA GTGTGCACGCG TAGCGC CGCGTGAAAAC GCGCATATAACACTT TPASS_0047 57036 - 56515 - | hypothetical protein TERM 59 56625 - 56635 + g 86 -6.8 -4.97405 | AGGAAGCCAGCTTTT GGTC AAT GACC TTTATTTTTGTAAAT TERM 60 56904 - 56868 - G 77 -10.2 -3.61398 | gap 1, opp_overlap 56872, overlap 56870 GTTCTTCGTGAACAA GAGACGGATCCTGCACT GCAG AGTGCGGG-TCCGTCTT AGGATATAGGAGGGA TERM 61 56902 - 56870 - G 83 -12.8 -3.38812 | gap 1, opp_overlap 56872, overlap 56868 TCTTCGTGAACAAGA GACGGATCCTGCACT GCAG AGTGCGGG-TCCGTC TTAGGATATAGGAGG TERM 62 56872 - 56900 + g 75 -11.8 -3.07962 | gap 1, opp_overlap 56870 56868 TTCGTGAACAAGAGA CGGATCCTGCACT GCAG AGTGCGGG-TCCG TCTTAGGATATAGGA TERM 63 56931 - 56946 + g 88 -2.4 -5.49568 | overlap 56933 GGGAGAGAAAGCGCG CAGCCT GCAG GGGCCG TTTTTCTTTTGACTT TPASS_0048 57473 - 57042 - | hypothetical protein TPASS_0049 58523 - 57495 - | hypothetical protein TERM 64 58252 - 58276 + g 74 -9.9 -3.49951 | TCTGCTGCTTCTTGG CGCAGGAGTGC AAG GTGCACCTGCG TTCTGTCCACCTCTG TERM 65 58619 - 58609 - R 70 -6.8 -4.07568 | CCTCTCCGGGGAAAA CGGT ATC ACCG CGGTTAGATACTGTC TPASS_0050 59424 - 58816 - | hypothetical protein prfA 59575 - 60630 + | peptide chain release factor 1 TERM 66 61226 - 61243 + GT 73 -11.3 -2.78906 | opp_overlap 61208 61209, overlap 61223 61221 GCGCGTACGTTTCGT GCACGCA GATG TGCGTGC TCCTATTCCGTTCTT hemK 60600 - 61646 + | protoporphyrinogen oxidase nrdB 62790 - 61735 - | ribonucleoside-diphosphate reductase, subunit beta TERM 67 63720 - 63735 + G 100 -6.1 -5.626 | GAAAGTCTAAATGTT GCGCA AGCGGG TGCGC TTTTTTTGTCCACTA TPASS_0054 62961 - 63920 + | hypothetical protein TPASS_0055 64127 - 64363 + | hypothetical protein TERM 68 65426 - 65440 + G 77 -11.4 -3.21099 | TGAACGTGCTGTTTG GCCGGT ACC ACCGGC TTACTGCTGAGACAA TERM 69 65939 - 65965 + G 85 -13.7 -2.70932 | opp_overlap 65922 65923 TTGGGGCGTGTACTA CGCTACCCGCG CCGGT CGCAGGTAGCG TAGTTAAACACACCG oadA 64360 - 66141 + | oxaloacetate decarboxylase, subunit alpha TERM 70 66313 - 66285 - g 81 -10.9 -3.60234 | GTACAGAGTTGTAAA GACACGGGGGCAC GAT GTGCGCCGGCGTC GTCCATGCGTGAGGA TERM 71 67046 - 67071 + G 76 -9 -3.76169 | GCTGCGTCCTGTTTC GCGGATAGAG AGAGTA CTCTTTCCGC TTGTCTTGCTCTTGC oadB 66153 - 67562 + | oxaloacetate decarboxylase, subunit beta dnaB 68953 - 67637 - | replicative DNA helicase DnaB TERM 72 68984 - 68958 - R 95 -14.5 -3.48395 | ATGCCCGGCACAGAA CCTCCTCCGAG GAATA CTCAGAGGAGG GAAGGTGGTGAAAAG TPASS_0059 69164 - 68937 - | hypothetical protein rplI 69640 - 69170 - | ribosomal protein L9 rpsR 70045 - 69746 - | ribosomal protein S18 ssb 70692 - 70162 - | single-strand DNA binding protein Ssb TERM 73 70224 - 70199 - G 70 -3.9 -4.66833 | opp_overlap 70203, overlap 70200 70203 70212 TCTGAACTTGAAAAA TCAGCCTCATC AAGG GACGAGGTTGC GTCCAGTCCTCTTTT rpsF 70982 - 70701 - | ribosomal protein S6 TPASS_0064 71124 - 71699 + | hypothetical protein TERM 74 71798 - 71784 - g 79 -4.2 -5.0538 | GGGGATGCTAAAAAA CCACGT ATT ACGTTG TCCGGATGGTCCTAT TPASS_0065 71773 - 72360 + | hypothetical protein TERM 75 72567 - 72577 + G 93 -8.2 -5.10656 | overlap 72548 72573 AGGCGGACGTGTTGA CCGC ACT GCGG TTTTATTATTTTGCT TPASS_0066 72344 - 72658 + | hypothetical protein TPASS_0067 72646 - 73827 + | hypothetical protein TERM 76 74023 - 74035 + G 70 -6.9 -4.07568 | overlap 74015 74016 ATGGAGTGGTGCTGC GCCCT TTC GGGGC TTTTGCCAGAAGAAA TERM 77 74377 - 74392 + G 72 -7.6 -3.91897 | CAAACAGGCCAGTTG GGTTTC GCGC GAAACC TTTCTGCCTCAGAGA TPASS_0068 74008 - 75030 + | hypothetical protein TERM 78 75074 - 75094 + T 70 -5.4 -4.41348 | overlap 75076 ACGTGTGGCCATGCT CGTTCCTG TTTTT CAGGAAAG TTTCTTTGAGGCAGC TPASS_0069 75616 - 75086 - | hypothetical protein TPASS_0070 75852 - 75466 - | hypothetical protein clpB 78539 - 75903 - | ATP-dependent Clp protease, subunit B TERM 79 76269 - 76279 + g 72 -5.4 -4.55093 | overlap 76265 TAATCCCCGTATCTG CTCT GGT AGAG TTTGTTCTTCTGTAG TERM 80 76535 - 76505 - G 75 -4.6 -4.7373 | opp_overlap 76505, overlap 76508 CTACTTCATCAAAAA GAAGTACGCTGTAG GGT CTACGTCGTACCGC TTCTGTCAATTGTCC TERM 81 76532 - 76508 - G 77 -7.1 -4.47707 | opp_overlap 76505, overlap 76505 CTTCATCAAAAAGAA GTACGCTGTAG GGT CTACGTCGTAC CGCTTCTGTCAATTG TERM 82 77178 - 77201 + g 76 -3.8 -4.97402 | gap 1, overlap 77180 CTGCATTGCAGCACG GCGCTC-TAGG AAG CCTGCGAGCTC TTTTTCTAACTTTTC TERM 83 77816 - 77848 + g 81 -10 -3.98661 | gap 1, overlap 77816 CAACCAATGCGCCGA G-GTCAAGGGAAAGC AAAC GCTTTCCCTTGAGGC TTTCTGGTACGTCTC TERM 84 78670 - 78689 + H 74 -2.7 -4.98103 | CGGTGCGCTTTGGCA GGCCGCG GTAAGG CGTAGCC TTTTATATTTTCTTG TPASS_0072 78743 - 79015 + | hypothetical protein TPASS_0073 80626 - 79085 - | hypothetical protein TERM 85 80975 - 80993 + G 74 -7.4 -4.08279 | overlap 80960 80968 CCGTGGTGCGGTGGG CACGGTGT GCT GCACTGTG TTGTTTCTCGCGTGT y4oP 80931 - 82340 + | sugar ABC transporter, periplasmic binding protein TERM 86 82882 - 82892 + G 72 -6.8 -4.19238 | opp_overlap 82881 GGTAAAATCAACTAC GCCT TGC AGGC TTTTGAGCTTGGACC TERM 87 82929 - 82939 + G 72 -4.6 -4.62984 | overlap 82920 82928 GTGGCTTGCGAATCC GCGT CTT GCGC TTTTGTCTGTGATAC TERM 88 83292 - 83311 + G 70 -5 -4.52781 | overlap 83294 GCTTCTGTTTCTCCT GACAAGTC TTTT GACTTGTA TTTTCATTCTCCTTA TERM 89 83294 - 83309 + G 72 -7.6 -3.85899 | overlap 83292 TTCTGTTTCTCCTGA CAAGTC TTTT GACTTG TATTTTCATTCTCCT y4oQ 82459 - 83349 + | sugar ABC transporter, permease protein y4oR 83389 - 84210 + | sugar ABC transporter, permease protein TERM 90 84465 - 84455 - g 85 -3.2 -5.38497 | ATCCAAACGAAAAAA GTAC TCG GCAC AGTTATTGCTTTTTT TERM 91 85045 - 85055 + G 75 -4.6 -4.77036 | TATCGAGCAGCTGCG CTGC GAT GCGG TTTTTCATGCTGCCG TERM 92 85672 - 85710 + G 95 -12.7 -4.09739 | gap 1 AGAGCCGACGGTATA TCCAAAGGTTCTGCGTTT GCGT GAACGT-GAACCTTTGGA TTTTGCGCACCTTGA cap 84251 - 85867 + | capsular polysaccharide biosynthesis protein TERM 93 86307 - 86294 - gf 86 -6.7 -5.00884 | opp_overlap 86293 86298, overlap 86298 AGCGTGTTTAAAAAA GGATG CGCG CATCC GTGCTATTGTACCCA TERM 94 86725 - 86755 + GF 84 -6.1 -5.01535 | gap 1, opp_overlap 86724, overlap 86741 ATCTTTTTGCACAAC GCGCGCGT-ATTGC CGCC GCGTTCACGCGTGC TTTTTCTCGTTATGA spsC 85872 - 87110 + | spore coat polysaccharide biosynthesis protein TERM 95 87488 - 87498 + GF 70 -6.8 -4.07885 | opp_overlap 87487 GCGGTGCAAGGAGAT GCAG AAA CTGC TTTTAAACGCGCATC TPASS_0079 87038 - 89260 + | hypothetical protein TERM 96 89428 - 89442 + G 85 -2.8 -5.4505 | overlap 89430 GGGGAGGCAGTATCC GCGTAT ATC ATACCC TTTTTTCTTGCGCAC TPASS_0080 89257 - 89724 + | quinoline 2-oxidoreductase TPASS_0081 89731 - 90579 + | hypothetical protein fhlA 92428 - 90626 - | formate hydrogenlyase transcriptional activator FhlA TERM 97 93706 - 93695 - g 81 -5.8 -4.84359 | GCAGGGGTATAAAAA CGGA GCGC TCCG TAAGGAAGAAATTCA TERM 98 94156 - 94195 + G 76 -10.7 -3.35996 | gap 2 CCGCAACCGGGTGCT GGCCCGCAACC-GGGT-GG TCAT CCGACCCTGGGTGCAGGCC TTCTACCTACCGGTC TPASS_0083 93174 - 94454 + | hypothetical protein TPASS_0084 94667 - 94434 - | hypothetical protein TERM 99 94570 - 94581 + g 100 -3 -5.65177 | CCTTCGGGGGAAGTC GATT CAGC AATC TTTTTTTCTACATCT ptsN1 95227 - 94781 - | PTS system, nitrogen regulatory IIA component TERM 100 95928 - 95940 + G 70 -4.7 -4.56597 | overlap 95929 GAAGTTTATCATGAT GGGCG TTG CGCCG TTTTTGAAAGGCAAG TERM 101 96169 - 96218 + G 81 -12.8 -3.14528 | overlap 96217 ACGGACGAGGACTGC TCTGCGGCGTCTGCCGGCGATC CAGGGC GGTCGTCAGCAGGCGCTGAAGG TATTGACCTTTCTGT TPASS_0086 95308 - 96252 + | hypothetical protein TPASS_0087 96794 - 96255 - | hypothetical protein TPASS_0088 97392 - 96778 - | hypothetical protein TERM 102 97446 - 97467 + r 100 -8.7 -5.08601 | GTTGTGTGGGTCCTT GCGTGCCTT GGCG AGGGTACGC TTTTTCTTAAAATAG TPASS_0089 98657 - 97422 - | cyclic nucleotide binding protein TERM 103 98167 - 98179 + g 78 -9.1 -3.92178 | GCTTCCTCTGCATAC GTCCC CTT GGGAC TTTCCTTGAGATAAT TERM 104 98274 - 98285 + g 81 -4.4 -5.1287 | AAGATGCGAGACATC CACA TCAG TGTG TTTTTTCAATGTCAA murB 99804 - 98740 - | UDP-N-acetylmuramate dehydrogenase TERM 105 99722 - 99672 - G 100 -19.1 -3.61398 | overlap 99713 GCGCTTCCTCAATAA GCGC-GCGCAGCTGTGTGCAGGAGC GCG GCTCC-GCCCAAAACTGCGCAGCGC CACCAATGCGGAAAG TERM 106 100279 - 100303 + G 72 -5.7 -4.58663 | gap 1, overlap 100283 CCACTCGGTGTTGCA GGTTGCAGCG CACTAT CGC-GCAGCC TTTTTCCGCGATACT TERM 107 100989 - 101001 + G 77 -3.3 -5.08601 | overlap 100972 TGAGTGGACAGTATC GCACG CAA CTTGC TTTTTCTTGGGATGC TERM 108 101036 - 101025 - g 77 -7.2 -4.58395 | opp_overlap 101030, overlap 101026 101027 GGGATGCGCTAAAAA CGGC GCGT GCCG CCCGACGGAGTTTTG cysS 99986 - 101548 + | cysteinyl-tRNA synthetase rpoE 101619 - 102107 + | RNA polymerase sigma-24 factor TERM 109 102580 - 102624 + G 74 -10 -3.52102 | gap 1 GCGAATTCCAACGTG CTGCGCAAACCAGCTG-CGGT GTTC ACCGTCTGTGCGTTTGCGCAG TTGTATGGCTCAGAT TPASS_0093 102091 - 102738 + | hypothetical protein TERM 110 103059 - 103040 - g 78 -5.7 -4.8048 | overlap 103042 103051 GCGTGATATCAAAAA CACCGCA GACAGG TGCGGTA TCGACCTTACCGACA pta 102876 - 103886 + | phosphate acetyltransferase TERM 111 105450 - 105471 + G 70 -3.6 -4.63527 | opp_overlap 105441, overlap 105451 ACCACATCGAGTTGC TCGCCTCG GGTGAG CGAGGGGG TTTTTGGGGTACTCG TERM 112 105528 - 105509 - g 83 -6.3 -5.00616 | TTTGCGCGTAAAAAA GCCGGCC AGTACA GGCAGGC TGCAATTATCTACCG TPASS_0095 103886 - 105832 + | hypothetical protein TPASS_0096 106268 - 105906 - | possible dnaK suppressor TERM 113 106205 - 106224 + g 85 -13.6 -2.79915 | opp_overlap 106204 TGGTTGTCAGCGAAC GCGCAAGC GAGC GCTTGCGC TCTACTAAGCTCACT infA 106438 - 106656 + | translation initiation factor 1 TERM 114 106660 - 106679 + T 72 -12.2 -2.82104 | opp_overlap 106676, overlap 106657 106671 106676 CGTGAGCGTTAGATT CCTCTCTC GCAG GAGAGAGG TGCTTGCTCCTCTTT TPASS_0098 107366 - 106716 - | possible heat-shock protein smbA 108125 - 107370 - | uridylate kinase TPASS_0100 108320 - 108922 + | possible thioredoxin ccdA 108915 - 109709 + | cytochrome c biogenesis protein rep 111720 - 109747 - | Rep helicase, single-stranded DNA-dependent ATPase TERM 115 109859 - 109880 + g 85 -8.7 -4.57341 | gap 1, opp_overlap 109858 109859 ATTTCGTCCAGAAAG GGGGAG-GCG GTG CGCTCTTCCC TTTTTCCGCCGCGTT TERM 116 110301 - 110323 + g 77 -7 -4.56775 | opp_overlap 110302 110303, overlap 110302 110303 GAATGTCTTCAACAA ATTTGCGTAC CTT GTACGCAAGA TTTTTCCCCGAAAGT TERM 117 110322 - 110302 - G 78 -8.3 -4.15788 | opp_overlap 110301 110302 110303, overlap 110303 AATGTCTTCAACAAA TTTGCGTAC CTT GTACGCAAG ATTTTTCCCCGAAAG TERM 118 110302 - 110322 + g 76 -10.5 -3.33744 | opp_overlap 110302 110303, overlap 110301 110303 AATGTCTTCAACAAA TTTGCGTAC CTT GTACGCAAG ATTTTTCCCCGAAAG TERM 119 110303 - 110321 + g 73 -11.8 -2.60032 | opp_overlap 110303 110302, overlap 110302 110301 ATGTCTTCAACAAAT TTGCGTAC CTT GTACGCAA GATTTTTCCCCGAAA TERM 120 110321 - 110303 - G 75 -11.8 -3.08991 | opp_overlap 110302 110301 110303, overlap 110302 ATGTCTTCAACAAAT TTGCGTAC CTT GTACGCAA GATTTTTCCCCGAAA TERM 121 111611 - 111629 + g 72 -6.7 -4.18494 | gap 1, opp_overlap 111588 111604, overlap 111610 AGCATATACGCGATG CGCGCCGT GATT ACG-CGCG TTTTCCCTGAGCCTG TERM 122 111921 - 111932 + G 83 -5.8 -4.89233 | overlap 111925 ACGTCATAGCGCGTA CTGC CCAA GCAG TTTTTGGTATTCGTG TERM 123 112588 - 112626 + G 81 -9.5 -4.09805 | gap 1, opp_overlap 112586 GATACTCACACAACC TGCGCTGCGCG-CACGCG TGCG TGCATGTCGCGTTGCGCA TTTGGTTATTGATGA TERM 124 112890 - 112916 + G 71 -2.9 -4.74611 | overlap 112891 CGGCACTGACTCAAC TTGTAGCGCGT TGTGT GCGCCCTGCAG TTATTTTTTGTGCTC TERM 125 113199 - 113212 + G 95 -6.7 -5.22006 | opp_overlap 113199 CAGGACGGGACGGAA TGCGT GCAG ACGCA TTTTTATTGTGGTCA TERM 126 113378 - 113394 + G 88 -8.7 -4.60797 | overlap 113379 GCCGGATGTGATGTG TGTGCAG GCA CTGCACG TTTTGTATGTGAGGA TERM 127 113379 - 113393 + G 72 -10 -3.35996 | overlap 113378 CCGGATGTGATGTGT GTGCAG GCA CTGCAC GTTTTGTATGTGAGG TPASS_0103 111785 - 113608 + | possible ATP-dependent DNA helicase TERM 128 113680 - 113696 + F 72 -3.6 -4.83169 | overlap 113682 113683 AGTTGCCTTGTATAT TCCGCG AGTTA CGCGCA TTTTTATGGCCGAGT ushA 113855 - 115636 + | 5'-nucleotidase TERM 129 115688 - 115658 - f 87 -15.6 -2.87522 | opp_overlap 115653 115668, overlap 115668 GTAACTTACATTAGA GGCCTGTAAAGAAC TAC GTTCTTTACAGGCT GTGCCAATCTGCTTT polA 115803 - 118796 + | DNA polymerase I TPASS_0106 120360 - 118828 - | possible carnitine transporter licC 121918 - 120341 - | protein LicC TERM 130 122174 - 122142 - R 84 -5.7 -5.08011 | opp_overlap 122145, overlap 122143 122145 122162 122163 AAAATCTGGAAAAAA CGACGCCC-CACACT GAGGA AGTGTACGGGCGT-G TTCGCCCGCCGTCAA TERM 131 122227 - 122202 - R 77 -3.9 -5.12617 | CAAGCACGCAAAAAA CAGGGGAAAAA GCAC CCCCCCCCCTG CTCGCTTCCTGCACA pfk 123657 - 122272 - | pyrophosphate--fructose 6-phosphate 1-phosphotransferase TPASS_0109 124637 - 123759 - | possible rRNA methylase TERM 132 123933 - 123921 - G 74 -10.5 -3.14132 | opp_overlap 123914 123911 GTGCGTGCGCAGCAA CGGCG AAA CGCCG TGCCCCTCGTTGCCT TERM 133 124880 - 124870 - H 70 -5.4 -4.52589 | CTGCTTGACAGAAAA TACG TGT CGTA CTAGCCTGGGCCTCC TERM 134 125354 - 125339 - g 86 -6 -5.16151 | opp_overlap 125348 GAAAGTCAAGAAAAA GCGCGC CTTT GCTCGC TGGGATACCAGAGAG TERM 135 125544 - 125533 - g 90 -4.4 -5.38497 | opp_overlap 125533, overlap 125525 ACGTAAAGGAAAAAA CCTT CACA AAGG TTTTTTACGACAAGA TERM 136 125533 - 125544 + G 79 -4.4 -5.00616 | opp_overlap 125533 125525 ACGTAAAGGAAAAAA CCTT CACA AAGG TTTTTTACGACAAGA TERM 137 126122 - 126133 + G 70 -4.4 -4.54477 | overlap 126131 TTTATCGCACAGCAT TCCT ATTG AGGA TTTTGTCCGTTTTGC TPASS_0110 125178 - 126911 + | hypothetical protein TERM 138 126909 - 126923 + F 76 -5.6 -4.70453 | opp_overlap 126901, overlap 126901 126910 GAAACTACGCACCTG TGAGCG TTT CGCTCC TTTTCTGTATTCCTT TERM 139 127417 - 127407 - g 85 -3.2 -5.4505 | CCCTTCAAGAAAAAA TACC GCA GGCA ATAGCGCTCATTCAA TERM 140 127499 - 127509 + G 70 -6.8 -4.09822 | overlap 127490 GTCCAAGCGCGGCTG CGCT TTG AGCG TTTCTCTGATCCCTT rpoN 126971 - 128398 + | RNA polymerase sigma-54 factor pepC 129747 - 128395 - | aminopeptidase C TERM 141 128959 - 128973 + g 71 -2.8 -4.87389 | ATCCGCAGTTGGCGC GTGAAT CAA ACTCAC TTTGTTTTTAAGATC TERM 142 129132 - 129142 + g 78 -5.4 -4.87665 | opp_overlap 129132 AGTAGATGGAAGAAA GGAA CGC TTCC TTTTTCTCCCTCAGG TERM 143 130505 - 130479 - g 81 -9.4 -4.11216 | CGTGCAGCTGCAAAA TGTTGTTCCTCC TCA GGAGGTACAGCA AGCGTTTGAAGACGT hflK 129889 - 130875 + | Lambda CII stability-governing protein hflC 130880 - 131875 + | Lambda CII stability-governing protein thiD 132709 - 131900 - | phosphomethypyrimidine kinase TERM 144 134091 - 134102 + G 70 -5.8 -4.19817 | TTGAACAACTGATTC GTCC CACT GGAC TTTTAGATCCATGCA TERM 145 134678 - 134666 - g 100 -3.3 -5.65513 | overlap 134668 134669 CAGGAAGTAAAAAAA GACGC TGC GCGTG TACAGGTCGCACCCC TERM 146 134707 - 134668 - g 74 -6.4 -4.45473 | gap 1, overlap 134666 134669 GGAAGTAAAAAAAGA CGCTGCGCGTGTACAGG TCGCACC CCTGTTG-CGCGCAGCA GACGCAGACGTGCGC TERM 147 134768 - 134745 - g 100 -4.6 -5.47218 | gap 1, opp_overlap 134761, overlap 134746 134747 CTGCACGCAAAAAAA TGGTACAGGCG TTG CGCCTACA-CA TGAAGGTTTGTGCGC uvrB 132860 - 134866 + | excinuclease ABC, subunit B tprC 136694 - 134898 - | protein TprC TERM 148 136439 - 136477 + g 83 -13.2 -3.00525 | gap 1, overlap 136433 TCAGCTGCAGCTGTG CCCACACCC-CTGAGCG TGCCTC CCCTCGGCGGGTGTGGG TGTGCTTTGACACCA TPASS_0118 138039 - 136774 - | hypothetical protein yaeE 138796 - 138137 - | amino acid ABC transporter, permease protein TERM 149 138256 - 138272 + g 77 -12.3 -2.79302 | GGAAGCGCTGATACC CGTAGCG GAT CGCTACG TCTCCTAAACCTCCT TPASS_0120 139605 - 138796 - | amino acid ABC transporter, ATP-binding protein TPASS_0121 139735 - 140802 + | hypothetical protein pckA 142878 - 141022 - | phosphoenolpyruvate carboxykinase TERM 150 141736 - 141719 - G 74 -7.7 -4.12188 | opp_overlap 141719 141707 141720, overlap 141720 GCAGGAGCGGTAAAA CGCGCAT TCGG ATGCGCA ATTTCTTCTCCTTTT TERM 151 143869 - 143848 - g 95 -15.1 -3.21595 | opp_overlap 143859, overlap 143859 143860 AAGCTTTATTACGAA GCGGCGCCA AATG CGGCGCCGC CGCCCATTTATGTAG TERM 152 143872 - 143860 - g 70 -10.5 -2.72461 | opp_overlap 143859, overlap 143848 143859 GAAGCGGCGCCAAAT GCGGC GCC GCCGC CCATTTATGTAGACC TERM 153 144648 - 144679 + G 76 -3.6 -5.00138 | gap 1, overlap 144650 144651 CGATGATGCAGAACA GCTGCGCGACGGTGA TTT TCTCTGTTCCGC-GC TTTTTCATTTGAGTA TERM 154 145544 - 145519 - g 82 -9.1 -4.27316 | gap 1, overlap 145520 TTTTGGAATGCAAAA CTGTTTGCC-GC CGC GCAGGCAAACAA ACTCATTTAAAGCAG TERM 155 145543 - 145520 - g 70 -10.4 -3.16068 | gap 1, overlap 145519 TTTGGAATGCAAAAC TGTTTGCC-GC CGC GCAGGCAAACA AACTCATTTAAAGCA TPASS_0123 142984 - 145554 + | hypothetical protein TPASS_0124 145568 - 146674 + | possible GTP-binding protein TERM 156 147005 - 147022 + G 70 -6.2 -4.183 | opp_overlap 146980 GCTGTTCAGTAAGCG CGCGCC AGATGC GGTGCG TTTCTTCGGGGTTCC exoA 146751 - 147545 + | exodeoxyribonuclease TPASS_0126 148484 - 147609 - | hypothetical protein TERM 157 148359 - 148380 + g 89 -13.1 -3.29511 | overlap 148363 CCCACGGCTGTTTGT CGAACCCTT TTTA AAGGGTTCG TTCTCGCGCGCTGGG TERM 158 149035 - 149051 + H 70 -9.3 -3.76125 | overlap 149037 TGTGGTTTCTTCCTG CTCGGGC GGC GCCCGTG TTTGACTTGCCCTCC TERM 159 149037 - 149049 + H 73 -10.5 -3.46336 | overlap 149035 TGGTTTCTTCCTGCT CGGGC GGC GCCCG TGTTTGACTTGCCCT TPASS_0127 149847 - 150227 + | hypothetical protein TERM 160 150288 - 150327 + F 100 -17.3 -3.19463 | opp_overlap 150299 GCAGGGGACTACTGT TGCCTCCAACACCGTGT TCCCGT GCACGGTCTTGGAGGCA TTGGTGCGTGATCCG TPASS_0128 150729 - 151076 + | hypothetical protein TERM 161 151381 - 151394 + G 100 -8.1 -5.5112 | overlap 151380 GTACCAGGAGCAGGG GCTGC AGCA GCAGC TTTTTTGTTCGTACC TPASS_0129 151061 - 151537 + | hypothetical protein TPASS_0130 152285 - 151866 - | hypothetical protein tprD 154153 - 152357 - | protein TprD TERM 162 153898 - 153936 + g 83 -13.2 -3.00525 | gap 1, overlap 153892 TCAGCTGCAGCTGTG CCCACACCC-CTGAGCG TGCCTC CCCTCGGCGGGTGTGGG TGTGCTTTGACACCA TPASS_0132 154408 - 154331 - | hypothetical protein TPASS_0133 155625 - 154393 - | hypothetical protein TPASS_0134 156752 - 155622 - | hypothetical protein TERM 163 155825 - 155880 + gr 70 -6.8 -4.09685 | gap 3, overlap 155820 TACTACGATACTGCT CG-GCGCTGCCTTC-CGGGGTGGAGCA GTTGG TGCCCCACCCGGTGGTGGC-GTGCACG TTTTCCGCCGTGAGG TPASS_0135 157645 - 156704 - | hypothetical protein TERM 164 156899 - 156919 + gH 75 -5.4 -4.59109 | gap 1, overlap 156903 GTAGAATTTTGGAAG GCTGTGTGG GTTG CC-CGCAGC TTTTTGAAAGGTGTG TERM 165 157791 - 157815 + H 71 -9.9 -3.51232 | opp_overlap 157785, overlap 157784 157787 AAAACAATACGCAGG GCGCTTAGCTC AGC GGGCAGAGCGC TTGGTTTACACCCAA TERM 166 159124 - 159106 - g 75 -6.7 -4.42806 | overlap 159102 CTACGGGGAAATAAA GCTGGAA GCGAG CTCCAGC GGTACGAACGGCACC TERM 167 159436 - 159470 + G 79 -3.5 -5.12172 | gap 1, opp_overlap 159438 GTGGAAGTTTGACAC CACCACG-TGCTCCTG GAAC CGCGAGTAACGGGGTG TTTTCTTTCTTCATC TPASS_0136 157985 - 159463 + | hypothetical protein TPASS_0137 159442 - 159579 + | hypothetical protein TPASS_0138 160453 - 159716 - | hypothetical protein TPASS_0139 161153 - 160461 - | hypothetical protein ntpJ 162920 - 161193 - | K+ transport protein TERM 168 161576 - 161560 - G 70 -6.5 -4.24294 | overlap 161563 ATGAATGAGCGAAAA GAAGCGA TAA TCGCTGC CGCTGTATTAAGTTT TERM 169 161573 - 161563 - G 72 -6.8 -4.23486 | overlap 161560 AATGAGCGAAAAGAA GCGA TAA TCGC TGCCGCTGTATTAAG TERM 170 162231 - 162255 + g 82 -2.1 -5.40464 | overlap 162219 162234 162240 CACCAGATGCGAGGC GACGAGTCT GCTTTCG AGGCTCATC TTTTTCTTTATGGTG TERM 171 163434 - 163423 - g 71 -2.2 -4.91511 | ACGGCACGACAAAAA GCTA TGCA CAGC TTTCACAGGACATCG TERM 172 163571 - 163582 + G 81 -4.4 -5.14563 | TTTTGCGTACGGGAG TGCT CTCA AGCA TTTTTTGCTGCAGCA dat 163092 - 163625 + | methylated-DNA-protein-cysteine S-methyltransferase TPASS_0142 164238 - 163576 - | possible thiamine ABC transporter, ATP-binding protein TERM 173 164072 - 164058 - G 73 -4.2 -4.82901 | overlap 164060 164062 TTCCGGCGATAAAAA CCGATC CAT GATCTG GAGTGATAAGGCCTG TPASS_0143 166012 - 164231 - | possible thiamine ABC transporter, permease protein TERM 174 164963 - 164944 - GR 82 -5 -5.03409 | TGAGAAAAAAAAGAA TTCCGCAC AGCA GTGCAAAA AATCCTATGCGCTCA TERM 175 165333 - 165292 - GR 100 -13.7 -4.54047 | gap 1, opp_overlap 165299 TGATGGTATAGAAAA CTCTATACGCGCGCGCGCCT AAC AGGCGCGCG-GCGTCTTCAG CGTCTGCGGAGATGG TERM 176 165299 - 165326 + gr 100 -19.2 -3.05343 | gap 1, opp_overlap 165292 ATAGAAAACTCTATA CGCGCGCGCGCCT AAC AGGCGCGCG-GCG TCTTCAGCGTCTGCG TERM 177 165585 - 165574 - GR 86 -7.2 -4.74132 | opp_overlap 165579 AGAGTGCAGGAAAAA GCGC CCGC GCGC GAAGGGAGCGTTTTA TERM 178 165821 - 165809 - GR 83 -6.2 -4.96848 | CGGTTTAGAGAAAAA GGCG CTTCC CGCC GTGAACACGGGGATA TPASS_0144 166977 - 165970 - | possible thiamine ABC transporter, thiamine-binding periplasmic protein TERM 179 168045 - 168059 + G 74 -6.4 -4.46617 | TGCGTAAGAAAGGGG GTGTTG CTG CAGCAC TTTTCCATTTCTTTT TERM 180 168122 - 168151 + G 70 -5.7 -4.3739 | gap 1, overlap 168140 168141 168143 CGCAGCGTGTTTGGG CTGCGTACGCATAC CAC GCGT-CGTGCGCAG TTTTGTGCGCCGCTG TERM 181 168291 - 168310 + G 71 -2.8 -4.87273 | overlap 168292 168295 CAGGGGGGGGCGCGC TTCCTCCA AATG TGGATGAG TTTTTGTACGCTATT TERM 182 168558 - 168538 - g 71 -2.4 -4.91109 | opp_overlap 168539, overlap 168539 GGGGTACTATAAAAA TCCTGAGC TTACC GCGCAGGT GTTAGATGCAGACGG TPASS_0145 167087 - 169057 + | long-chain-fatty-acid--CoA ligase TERM 183 169117 - 169129 + T 74 -10.5 -3.53444 | opp_overlap 169113 TGCTCCGCAAACCCT GGCCC GCG GGGCC TTTGCGGCGGACTGG TERM 184 169570 - 169589 + T 71 -5.7 -4.37157 | CGCTTTGCACCACGC TGGGGGT AGTGAC ACCCTCA TTTCTTATCATCGTT TERM 185 170095 - 170116 + T 74 -10.9 -3.50456 | overlap 170091 170088 TGCAGGTATAGCAGG TGCGCTTGT GTGC ACGAGCGCA TTGGTGTTTCCTTCG TERM 186 170367 - 170377 + T 74 -2.4 -5.06414 | TGTTTTTGGTGTTAT GCGC ACT GAGC TTTTTCTTCAAAAGG TPASS_0147 172321 - 170462 - | possible alpha-amylase 1 TERM 187 170863 - 170881 + g 88 -2.5 -5.52384 | gap 1, opp_overlap 170879 GAACTTGTACGCCTT CAG-ACTT AAAA AAGTACTG TTTTTTTAATGAAAC TPASS_0148 172896 - 172318 - | hypothetical protein TERM 188 172514 - 172504 - G 87 -4.6 -5.24799 | GGAGAAACATAAAAA GCCG ACA CAGC TCACTCCCCACATAA TPASS_0149 173483 - 172890 - | hypothetical protein TPASS_0150 173943 - 173476 - | hypothetical protein TERM 189 173538 - 173526 - G 72 -10.5 -3.12351 | TTTTTCTACACTGAA GCGCG ATG CGCGC ACTCGATATGCCATA TERM 190 173569 - 173557 - G 86 -9.1 -4.41548 | CGATATGCCATAAAA GCGTG CAT CACGC GGTGTAGGGTGATTA TERM 191 173809 - 173827 + g 81 -4.5 -5.07652 | opp_overlap 173804 TGCAAGGATATCTGC GGCGC AGGTGATGA GCGCC TTTTCTTTTAAAAAA TPASS_0151 174946 - 173927 - | hypothetical integral membrane protein TERM 192 174830 - 174814 - G 100 -13.7 -5.1101 | TGACGATGGAAAAAA GCGCGAC CGT GTCGCGC ATGGCTGCAACGACG rnfC 176477 - 174933 - | nitrogen fixation protein TERM 193 175158 - 175174 + g 81 -4.3 -5.10461 | overlap 175159 AGTAAACTGATTACG GTGTGCG GCA CGCGCAA TTTTTATTGGGTCAA TPASS_0153 177044 - 176553 - | hypothetical protein TERM 194 176913 - 176901 - G 88 -2.6 -5.48054 | AGCAAAATCAAAAAA GCCG TGCAC CGAC CGTATAGCCGACCTT TERM 195 178070 - 178084 + G 100 -11.4 -5.96521 | AGTCAGCACGGGAAT GCGCGT TAC ACGCGC TTTTTTTTGCTTGCT TPASS_0154 177269 - 178306 + | hypothetical protein TERM 196 178709 - 178697 - g 71 -3.3 -4.76041 | opp_overlap 178699, overlap 178699 GACAGCTACTAAAAA TCCCC TCA GTGGA CGGCATTTTATATAC TPASS_0155 178312 - 179427 + | fibronectin binding protein TPASS_0156 179872 - 179468 - | hypothetical protein TPASS_0157 180771 - 179869 - | hypothetical protein TPASS_0158 181454 - 180768 - | hypothetical protein TERM 197 180810 - 180823 + g 70 -3.9 -4.61231 | TGCAAGGTGTGCGGG CAATT CATA AATTG TTTTTACGCGTGTCA TPASS_0159 182486 - 181458 - | hypothetical protein TERM 198 182367 - 182352 - G 79 -4.6 -4.91109 | GTCGTAGCACAAAAA GCCAAC CCAT GTGGGC GATTTCCACGAATAG proS 184455 - 182602 - | prolyl-tRNA synthetase TERM 199 182689 - 182678 - G 82 -2.2 -5.40072 | opp_overlap 182680 182680 182688, overlap 182680 182681 TCTTGCGTAAAAAAA TACG TGTG CGCA CCACACCGTGTTGTG TERM 200 183560 - 183542 - G 70 -5.3 -4.39426 | gap 1, overlap 183544 CACACTGCCACAAAA TG-CCCAG CCGC CTGGGGCA CCGTGTCAATGCGGT TPASS_0161 184550 - 184458 - | hypothetical protein ruvB 185619 - 184567 - | Holliday junction DNA helicase, subunit B TERM 201 185492 - 185502 + g 82 -3.2 -5.20781 | GCCTGAATGAAAAGA CGTA AGT TGCG TTTTGTTTTCTCCTG TERM 202 185692 - 185704 + H 79 -3.3 -5.13722 | overlap 185691 AGCTCGAGAGGTCCG CGCCA GAG TGCCG TTTTCTTTTCCTGAA troA 185794 - 186720 + | ABC transporter, periplasmic binding protein troB 186868 - 187668 + | ABC transporter, ATP-binding protein troC 187640 - 188536 + | ABC transporter, permease protein TERM 203 188915 - 188927 + G 70 -4.8 -4.46531 | GAAATTGGACTTGCG CCCT TGGAT AGGG TTTCGTTTTTTGCTT TERM 204 189253 - 189266 + G 81 -4.5 -5.08601 | GCTCGCCTCTTGTGC GTCCA TTAG TGGGC TTTTTCTTGCGGTGA troD 188540 - 189643 + | ABC transporter, permease protein troR 189653 - 190114 + | cation-activated repressor protein pgm 190194 - 190949 + | phosphoglycerate mutase TERM 205 191165 - 191210 + F 82 -5.4 -5.09895 | gap 1, overlap 191167 TTCCGTTCATTTATC GGTGTGCCTTG-TGGTCGGGG CTTTT TCCTGACCTTCAAGGGACAGC TTTTTTCCGTGCCTG TERM 206 191229 - 191240 + G 70 -3.6 -4.60746 | overlap 191237 TTTCCGTGCCTGGGT TGCG AGTG CGCG TTTTCGTGTTTTTCA TPASS_0169 191173 - 191271 + | hypothetical protein pfs 191268 - 192077 + | protein Pfs tpp15 192177 - 192605 + | lipoprotein, 15 kDa TPASS_0172 193280 - 192753 - | hypothetical protein TPASS_0173 193998 - 193315 - | hypothetical protein TPASS_0174 194809 - 193967 - | hypothetical protein TPASS_0175 195191 - 194559 - | hypothetical protein TPASS_0176 195488 - 195222 - | hypothetical protein TPASS_0177 196795 - 195485 - | hypothetical protein TERM 207 195552 - 195563 + g 93 -5.8 -5.26316 | ATGAGAGTTTGTGTT CCCT GAGA AGGG TTTTTTCTCAGGTGA TERM 208 195691 - 195704 + g 81 -5.9 -4.87665 | TGCGTTCAAAGTAGT GGCGG AGCA CTGCC TTTTTGTGGATGCGC TERM 209 196695 - 196662 - G 81 -10.3 -3.91946 | gap 1, overlap 196663 AAGAAAGAATGCAAA CTGCG-CGCAGTCTGG TCT CCAGACTGCGTCCCAC TGGATATCGGATGAA TERM 210 196694 - 196663 - G 86 -13.8 -2.93541 | gap 1, overlap 196662 AGAAAGAATGCAAAC TGCG-CGCAGTCTGG TCT CCAGACTGCGTCCCA CTGGATATCGGATGA TPASS_0178 197815 - 196889 - | hypothetical protein TERM 211 197375 - 197360 - G 70 -6.8 -4.0616 | overlap 197368 TACGGCAAGGATAAA GGAACG CACG CGCTCC TCGCCTGATGCATCA TPASS_0179 199698 - 197815 - | hypothetical protein TERM 212 198174 - 198193 + gr 71 -6.4 -4.28254 | TATCTTCGCGCTGGG TGTCGTCG TCGT CGAAGACA TTTTCAGTATTGAGG TERM 213 199294 - 199271 - GR 71 -9.6 -3.46178 | overlap 199261 ACAAAGCCACGAGAA TCCTCTGCAG AGGA CTGCACAGGA AGCGCACGGTACACA TPASS_0180 199798 - 199640 - | hypothetical protein TERM 214 199845 - 199856 + GH 73 -3.6 -4.82901 | GCGCTGAACAGCTAC GGTG TACT CGCC TTTTTCTGGGGAGAG TPASS_0181 199791 - 200234 + | hypothetical protein TPASS_0182 200074 - 200853 + | hypothetical protein TPASS_0183 201701 - 200856 - | hypothetical protein TERM 215 201499 - 201487 - G 81 -9.1 -4.07568 | opp_overlap 201486 201482 201487 CCTTTTTCGGGAAAA CGGTG CGG CACCG CTTGCTCTCTGCAAT smpB 202170 - 201706 - | small protein B sip 202258 - 202965 + | signal peptidase I TPASS_0186 203020 - 204201 + | possible oxygen-independent coproporphyrinogen III oxidase TERM 216 204436 - 204453 + G 72 -7.7 -3.99678 | gap 1 CGCGCTGGTTGTGCG CGGTGCCT GAG AGGC-CCG TTTGGTTGTAGCGCT TERM 217 205339 - 205328 - g 72 -4.4 -4.71828 | opp_overlap 205316 AGCCCACTAAGAAAA CAGT GGTT ACTG GCATTGAGATGTTTA tuf 204265 - 205752 + | translation elongation factor TU rpsJ 205824 - 206132 + | ribosomal protein S10 rplC 206179 - 206805 + | ribosomal protein L3 rplD 206819 - 207469 + | ribosomal protein L4 rplW 207456 - 207740 + | ribosomal protein L23 rplB 207796 - 208617 + | ribosomal protein L2 rpsS 208627 - 208914 + | ribosomal protein S19 TERM 218 209026 - 209037 + G 70 -7.2 -4.09739 | GCAAGCCGTATGTGC GCGC GATG GCGC TTTTGGGACACTTAC rplV 208923 - 209297 + | ribosomal protein L22 TERM 219 209658 - 209668 + G 81 -6.8 -4.7261 | overlap 209648 TGTTGCTCGCCAACT CACG GCG CGTG TTTCTTTTCGTAAGT TERM 220 209809 - 209794 - g 70 -4.6 -4.57755 | opp_overlap 209808 ACTGAGGAGATAAAA GAGGGG CGTA CGCCTC TGCACACGCTGCGCG rpsC 209281 - 210024 + | ribosomal protein S3 rplP 210028 - 210447 + | ribosomal protein L16 rpmC 210462 - 210680 + | ribosomal protein L29 rpsQ 210695 - 210949 + | ribosomal protein S17 rplN 210962 - 211330 + | ribosomal protein L14 TERM 221 211435 - 211450 + G 70 -6.1 -4.25848 | GTGCTGCGTGTGCTC CGCGA CGTAGA TCGCG TTTTGGTGCAGGGTT rplX 211342 - 211653 + | ribosomal protein L24 rplE 211650 - 212207 + | ribosomal protein L5 rpsN 212219 - 212404 + | ribosomal protein S14 rpsH 212420 - 212818 + | ribosomal protein S8 rplF 212828 - 213367 + | ribosomal protein L6 TERM 222 213476 - 213496 + G 77 -9.8 -3.65351 | GCCCTCGGATGACGG TGTTCCGA AGTAA TCGGAACA TTTCGGTGCAGGTCA rplR 213376 - 213738 + | ribosomal protein L18 rpsE 213747 - 214265 + | ribosomal protein S5 rpmD 214268 - 214453 + | ribosomal protein L30 TERM 223 214636 - 214646 + G 71 -2.4 -4.89852 | overlap 214626 214635 CTATATCGGCGTGTG CCGC GGC GGGG TTTTTCTAACTGTGC rplO 214453 - 214914 + | ribosomal protein L15 secY 214922 - 216274 + | preprotein translocase subunit rpmJ1 216279 - 216392 + | ribosomal protein L36 rpsM 216408 - 216773 + | ribosomal protein S13 rpsK 216791 - 217171 + | ribosomal protein S11 rpoA 217186 - 218241 + | DNA-directed RNA polymerase, alpha subunit TERM 224 218417 - 218433 + G 83 -5.8 -4.88918 | gap 1, opp_overlap 218416 218417 GACTCTGTGCATAAC CGGCGCC AGGT GGC-CCG TTTTATTTGGGATAA rplQ 218231 - 218725 + | ribosomal protein L17 TPASS_0214 218749 - 218946 + | hypothetical protein grpE 219152 - 219814 + | chaperone protein GrpE TERM 225 220881 - 220863 - g 72 -8.8 -3.74693 | overlap 220865 TTTGAGCGGACCAAA GAGCCTTG CCG CAAGGCGC TCAAAGACGCCGGAA TERM 226 220879 - 220865 - g 74 -10 -3.4582 | overlap 220863 TGAGCGGACCAAAGA GCCTTG CCG CAAGGC GCTCAAAGACGCCGG TERM 227 221749 - 221733 - g 85 -13.7 -2.77994 | overlap 221724 TATAAACGTCAAGCA GCAGCGG GTG CCGCTGC AGGTAAGAAGAGTGA dnaK 219930 - 221837 + | heat shock protein 70 TERM 228 221911 - 221940 + F 83 -12.1 -3.65693 | CCCCAGGCCTTTTGT GATCCGGGTGTTC GCCT GATCGCCCGGGTC TTTCGGCTGTCTAGT TERM 229 222162 - 222152 - f 74 -2.4 -5.10877 | opp_overlap 222158 AGAAGAAATCAAAAA GGCG TAC CGGC GGCTGGCTATTCAGT TERM 230 223861 - 223875 + G 70 -5 -4.54047 | ACACGCACGTATGAT CTTGTG CTT CATAAG TTTTCTATGGACTAC TPASS_0218 223384 - 224853 + | possible sigma factor SigB regulation protein TERM 231 225241 - 225252 + G 74 -3 -4.95302 | opp_overlap 225235, overlap 225235 AGTTTTAAATTTTAC CAAA ATTA TTTG TTTTCTTCTGTTTCG TERM 232 225555 - 225566 + G 73 -3.6 -4.73682 | TAAAGAAGTGGTGTT TGCG CTAT CGCG TTTTGTGTTATGCAC TERM 233 225716 - 225726 + G 74 -3.2 -5.01732 | ATTATGCCTTTGATG CATG TAG CGTG TTTTTTGGGGAAATT TPASS_0219 224857 - 227004 + | possible sigma factor SigB regulation protein spoIIAA1 227033 - 227359 + | anti-sigma F factor antagonist TERM 234 227635 - 227654 + G 70 -5.6 -4.34482 | overlap 227645 GCCGAAGCATCTGGT GCCGGTGC GTGA GCAGTGGC TCTTTTTTTCAAAGG TERM 235 227645 - 227656 + G 95 -5.8 -5.40072 | overlap 227635 CTGGTGCCGGTGCGT GAGC AGTG GCTC TTTTTTTCAAAGGGG TERM 236 227670 - 227681 + G 70 -5.8 -4.19704 | opp_overlap 227669 TCTTTTTTTCAAAGG GGAG GTCG CTCC TTTTAACTAAGATTG TPASS_0221 227360 - 228142 + | possible D,D-carboxypeptidase TPASS_0222 228152 - 228598 + | hypothetical protein TERM 237 229004 - 229032 + G 70 -6.6 -4.04206 | gap 1, overlap 229004 CCGACTGCAGGTATT C-CTGCGCTCCGC GAGC GCTGGGCGCGGCG TTTGTGTGCGCGTGA TERM 238 229279 - 229294 + G 74 -3.2 -4.98672 | overlap 229277 AGCAGTGCGTTGTGC GGCAAC GCCG GTTCCC TTTTCTCTTTTTCGA TPASS_0223 228866 - 230173 + | aspartate aminotransferase TpAAT TPASS_0224 230210 - 230314 + | hypothetical protein TPASS_0225 230360 - 231100 + | leucine-rich repeat protein TpLRR TERM 239 232869 - 232897 + T 100 -9.6 -4.93296 | gap 1, overlap 232870 232872 GGCATGGTGCCGTGT TC-GCCGTGTGGC GGAA GCCACACGGTAGG TTTTTCTGCTCCTGC TERM 240 232870 - 232896 + T 74 -10.9 -3.55254 | gap 1, overlap 232869 232872 GCATGGTGCCGTGTT C-GCCGTGTGGC GGAA GCCACACGGTAG GTTTTTCTGCTCCTG TERM 241 232872 - 232893 + T 87 -15.9 -2.89738 | overlap 232870 232869 ATGGTGCCGTGTTCG CCGTGTGGC GGAA GCCACACGG TAGGTTTTTCTGCTC TERM 242 233676 - 233664 - T 71 -6.2 -4.34993 | GAAAGATGAAAAGAA CCCC GGTGA GGGG AGTGAAATAGAACCT TPASS_0226 236938 - 236252 - | hypothetical protein TERM 243 236625 - 236612 - G 90 -6.7 -5.16841 | opp_overlap 236612, overlap 236615 GCACAGCAATAAAAA TAGGC GGAT GCCTA TGTGGTATCCTGCAT TPASS_0227 237758 - 236991 - | cobalt ABC transporter, ATP-binding protein TPASS_0228 238640 - 237825 - | possible biotin synthase TERM 244 238185 - 238169 - GH 73 -5 -4.59773 | overlap 238171 CCGTAGGGGCAAAAA GCGCGG TGTAT CCGCCC CGACCTCCTGAAAAA TERM 245 238661 - 238675 + GH 73 -11.4 -2.79133 | opp_overlap 238660 238657, overlap 238669 GGACAGAGAGAGTAT CGCACG CTT CGTGCG TGTGGTGCGCGATTG TPASS_0229 238584 - 239417 + | DNA polymerase, bacteriophage-type TERM 246 239852 - 239873 + G 80 -5.7 -4.96848 | overlap 239854 CGATTGATGCGATTA CCGCGAGCA CCGG TGCGCGCAG TTTTTATGTGCACGG TERM 247 240915 - 240929 + G 75 -7 -4.30416 | overlap 240917 CACGCCAGACTTTCG CGCCGC CGA GCGGAG TTTTGCCTTGATGAT TERM 248 241076 - 241094 + G 74 -8.1 -4.13343 | overlap 241079 ATGCGCAAGAACTTG CGCAGCG GGAGG CGCTGTG TTTTCCGCCCTTTGT TERM 249 241165 - 241183 + G 70 -6.7 -4.07568 | opp_overlap 241142 241140 241162 241161 241159, overlap 241164 AAGGCTAAAGACGCC GCGTATG CGGCA CATGCGC TTTTGACGGCGCAGA TERM 250 241278 - 241323 + G 72 -4.5 -4.69027 | gap 1 TCGGATGCAAATACT GCTGCGTGCCCCATCATTC-CC AGT GGTGCAGCAGGTGGCGCGCAGC TTTTTAGATGAATTT priA 239422 - 241395 + | primosomal protein N TPASS_0231 241496 - 242146 + | hypothetical protein TPASS_0232 242246 - 242362 + | hypothetical protein TERM 251 242710 - 242721 + G 71 -2.2 -4.98758 | GGTGTATGAGGTTTT CCAG TTAC TTGG TTTTTCTCAGTTTTT TERM 252 242806 - 242821 + G 84 -7.6 -4.63932 | ACCGCTGAAGGTGGA CACCTT TCCG AAGGTG TTTTCTTGCCCGATC TPASS_0233 242393 - 242938 + | possible anti-sigma F factor antagonist TERM 253 242938 - 242948 + F 71 -4.6 -4.55295 | overlap 242923 CGTGTCTCTCGGTTA GGTG ACG CGCC TTTCTTTCTGGGGCA rpmG 243173 - 243343 + | ribosomal protein L33 secE 243493 - 243672 + | preprotein translocase subunit TERM 254 243813 - 243803 - g 74 -3.2 -4.96848 | TCTTTGATATAAAAA TCCC TGA GGAA CTGCTTACCGAGGTG TERM 255 243944 - 243956 + G 79 -2.6 -5.2166 | overlap 243936 243935 AGGTGCGCAGGATTC CTGG TGTTT CCGG TTTTTTGGGTTCTTC nusG 243682 - 244239 + | transcription antitermination protein TERM 256 244419 - 244402 - g 72 -10.5 -3.05384 | GTGTCCTGCAGGCAA GGCGACG CCCG CGCCGCC GGTTGGGCCTGCGCT rplK 244346 - 244786 + | ribosomal protein L11 TERM 257 244943 - 244973 + G 77 -8.3 -4.07687 | gap 1, opp_overlap 244943 TTAAGAAGAATCAGA CGGTGAGGGA-TAC GGTT GTGCTCCCCCACCG TTTTCGGGCCGAGGT rplA 244783 - 245463 + | ribosomal protein L1 rplJ 245465 - 246007 + | ribosomal protein L10 TERM 258 246496 - 246466 - g 70 -6.9 -4.00843 | opp_overlap 246465 246466, overlap 246467 GGCAAAGATAAAAGA GTCAATGACCGCA GCGGG TGCGCTCATTGAG ATTTCCTAGTGTCTG rplL 246116 - 246505 + | ribosomal protein L7/L12 TERM 259 246502 - 246512 + F 95 -3.2 -5.81412 | GCTCATTGAGATTTC CTAG TGT CTGG TTTTTTTTGCATGCG rpoB 246768 - 250304 + | DNA-directed RNA polymerase, beta subunit TERM 260 250771 - 250757 - g 72 -4.3 -4.64763 | CGATTTAAAAAAGAA TCAGT TGCTC ACTGA AACTGAGTACAATGA TERM 261 250826 - 250848 + G 70 -6.9 -4.08692 | CTTTACGGCGGGAAT GGGAGCGGA GGCTA TCCGTACCC TTTTGCAAAACCTTG TERM 262 251791 - 251809 + G 78 -7.4 -4.31164 | CGATTGTGTATCCAT CTCAGGAC ATG GTTCTGGG TTTGTATTATCTGAC TERM 263 252331 - 252319 - g 76 -7.7 -4.17048 | opp_overlap 252319 TGTGGTCTAAAACAA GTGAG GAG CTCAC TTCGCTCATGATGGA TERM 264 252516 - 252530 + G 100 -7.2 -5.72622 | AATTTTAAAGAGGGA CTCAAT GTC ATTGAG TTTTTTATTTCTACC TERM 265 253145 - 253158 + G 74 -8.1 -4.13561 | CTCTCAGCTGTTCAC GCGTC GGGG GACGC TCTTTTTTCACAAAA TERM 266 253184 - 253174 - g 70 -5.4 -4.36914 | TCTTTTTTCACAAAA CTCT GGC AGAG TATCAGCTTCAAGAG rpoC 250317 - 254567 + | DNA-directed RNA polymerase, beta subunit rpsL 254670 - 255044 + | ribosomal protein S12 rpsG 255066 - 255536 + | ribosomal protein S7 TERM 267 255923 - 255940 + G 77 -9.9 -3.5774 | overlap 255912 255913 CTGTGCAGTGCAGAT TGCCTGT TGTT ACAGGCA TTTACGCACTTCCAT TERM 268 257995 - 258010 + G 87 -4.7 -5.22039 | CTGTGGAGATGAGTG CACGT ACAGTG ACGTG TTTTTTGAATTTGGA TPASS_0245 255560 - 259015 + | hypothetical protein TERM 269 259031 - 259051 + F 100 -8.3 -5.78622 | overlap 259032 ATGTGATGCGAAGCG TGCGCAAGA GAA TTTTGCGCG TTTTTTTTCCGCTGA TERM 270 259032 - 259050 + F 80 -9.6 -4.06089 | overlap 259031 TGTGATGCGAAGCGT GCGCAAGA GAA TTTTGCGC GTTTTTTTTCCGCTG TERM 271 259173 - 259184 + G 74 -5.8 -4.56597 | GGGATGGTAGGGGTT CCAC TGCA GTGG TTTTTAAAGGACGAC TERM 272 260820 - 260788 - g 72 -7 -4.16016 | TGAGTCCGGAAGAAA CCGCGCTTTTCCAT GATGT ATGGAATAGCACTG AGGAGTTAGGACTAT TPASS_0246 259161 - 260954 + | hypothetical protein amiA 261005 - 262078 + | N-acetylmuramoyl-L-alanine amidase TERM 273 262339 - 262365 + G 76 -3.6 -4.91109 | overlap 262343 262343 262344 262346 TTACGCACGGTTGGT GGATCCAGCGGT GAG ACCGCTGAGTTG TTTTTCTCGTGGCGA TERM 274 262343 - 262362 + G 85 -8.6 -4.56153 | gap 1, overlap 262343 262339 262344 262346 GCACGGTTGGTGGAT C-CAGCGGT GAG ACCGCTGAG TTGTTTTTCTCGTGG TERM 275 262344 - 262360 + G 76 -12.3 -2.5848 | overlap 262343 262343 262339 262346 CACGGTTGGTGGATC CAGCGGT GAG ACCGCTG AGTTGTTTTTCTCGT TPASS_0248 262145 - 262549 + | hypothetical protein flaA1 262628 - 263680 + | flagellar filament outer layer protein TPASS_0250a 263731 - 263958 + | hypothetical protein rpsT 263793 - 264080 + | ribosomal protein S20 TPASS_0251 264112 - 264429 + | DNA-binding protein II TERM 276 265252 - 265263 + G 81 -7.2 -4.71828 | TGATTTGGTGGTGTG GCCG GAGA CGGC TTTTGTTCCTCGCAT TPASS_0252 264419 - 266059 + | possible apolipoprotein N-acyltransferase TERM 277 266221 - 266236 + G 75 -5.4 -4.64423 | GCGGTGTGTGCAGTT CAGTAC GCGC GTGCTG TTTCTATTTTTGTTG TPASS_0253 266050 - 266463 + | hypothetical protein TERM 278 267300 - 267322 + G 93 -9.9 -4.44448 | gap 1 ATCTATGGGCAGATT CGCTC-CCCT AAGG AGGGAGAGCG TTTCTTTGCAATGCT rho 266700 - 268259 + | transcription termination factor Rho rpmE 268378 - 268581 + | ribosomal protein L31 pgsA 268626 - 269276 + | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase glpQ 269373 - 270443 + | glycerophosphoryldiester phosphodiesterase TPASS_0258 271219 - 270509 - | hypothetical protein TERM 279 270570 - 270536 - G 89 -14.3 -3.15544 | gap 1, opp_overlap 270557 270565 270567 270568 GTTCATCTCCATGAA GCGAGCACGCACCGCC TCGA GAC-GTGCGAGCTCGC GCGATATGGTACGCG TERM 280 271887 - 271875 - g 80 -5.5 -5.01732 | overlap 271876 271884 AACTCGGGGAAAAAA TCGGC AAG ACCGA TCCTCGGGACATGCC TPASS_0259 271298 - 271909 + | hypothetical protein TPASS_0260 273386 - 272040 - | hypothetical protein TERM 281 272436 - 272426 - G 77 -8.2 -4.08394 | opp_overlap 272426 272428, overlap 272427 AGACGTGTTCCAAAA GCGC ACT GCGC CGCAGCTGCTCTTCT TERM 282 272628 - 272666 + g 87 -4.4 -5.24129 | ACGGGAGTAGGGAAA GGCGTAGTGCGCATCGGG CAA TTCAATGCGTGCGAGGCC TTTTTTCTCACCGAC TERM 283 272883 - 272872 - G 81 -5.8 -4.84761 | opp_overlap 272879 AGACCGTGAGAAAAA CACC ATCC GGTG GTACCGTCTTCGGTC TERM 284 273087 - 273113 + g 100 -13.1 -4.59342 | gap 1 GTAACGGTACTCGCG GAGGCGC-TCAG CGTA CTGAAGCGCCTC TTTCTTTGTCCTGCA TERM 285 273499 - 273513 + H 80 -5.6 -4.89852 | opp_overlap 273499, overlap 273500 TCTATCGAAAATGTA CCGTGG GAG CCACGC TTTTTCTCGGTGTCG TPASS_0261 273501 - 274544 + | possible catabolite gene activator crp 274522 - 275196 + | catabolite gene activator TERM 286 276853 - 276871 + G 100 -4.6 -5.47399 | overlap 276855 ATACGGTGCGGGGAC TGCAGAAC GGC GTTTTGTA TTTTTTTGCGCTTGC TPASS_0263 275211 - 276995 + | hypothetical protein TERM 287 277414 - 277448 + G 72 -5.8 -4.3739 | gap 1, overlap 277410 277416 GAGATGCACATCGCG TTTGCGTGTTCCTGT GTGGAG GCAGGA-CACGCGGA TTTTATCAAAACATC TERM 288 277565 - 277583 + G 78 -8.1 -4.4017 | gap 1 CAGGCGGCATCCGTA CGC-GCGC GCAG GCGCAGCG TTTTATCGAGCTTGG deoC 277000 - 277656 + | deoxyribose-phosphate aldolase braC 279455 - 278088 - | amino acid ABC transporter, permease protein TPASS_0266 279506 - 279631 + | hypothetical protein TERM 289 281303 - 281331 + F 100 -9.6 -4.93296 | gap 1, overlap 281304 281306 GGCATGGTGCCGTGT TC-GCCGTGTGGC GGAA GCCACACGGTAGG TTTTTCTGCTCCTGC TERM 290 281304 - 281330 + F 74 -10.9 -3.55254 | gap 1, overlap 281303 281306 GCATGGTGCCGTGTT C-GCCGTGTGGC GGAA GCCACACGGTAG GTTTTTCTGCTCCTG TERM 291 281306 - 281327 + F 87 -15.9 -2.89738 | overlap 281304 281303 ATGGTGCCGTGTTCG CCGTGTGGC GGAA GCCACACGG TAGGTTTTTCTGCTC TERM 292 282120 - 282108 - f 71 -6.2 -4.34993 | GAAAGATGAAAAGAA CCCC GGTGA GGGG AGTGAAATAGAACCT TPASS_0267 284740 - 285105 + | hypothetical protein TERM 293 285490 - 285506 + G 78 -10.8 -3.45788 | opp_overlap 285489, overlap 285488 GTGCCCCGAATGGAG CGCGGC AGACC GCCGCG TATTATCTTATGGGG TPASS_0268 285102 - 285755 + | hypothetical protein TERM 294 285877 - 285891 + G 77 -10 -3.65656 | GCCGTGGCAATACCT CCACTG CCC CAGTGG TTCTGTGTGTGATCA TERM 295 285951 - 285941 - g 81 -8.2 -4.36931 | opp_overlap 285938 285941 TAAGGCAGAGCAAAA GGCG CGG CGCC TCGTTCGTCTCCTGT TPASS_0269 285765 - 287213 + | hypothetical protein pcnA 287287 - 288723 + | polynucleotide adenylyltransferase parB 289694 - 288720 - | chromosome partitioning protein parA 290442 - 289681 - | chromosome partitioning protein TERM 296 291069 - 291079 + G 70 -6.8 -4.13561 | CCAATGCGTATATCT CTCG GCA CGAG TATTTTTTGAGCACC TERM 297 291199 - 291221 + G 72 -6.2 -4.3129 | overlap 291191 ATTGTGCTTCTGTGG CAGGATGTGC TGC GCACGCTCTG TTTTCGTCGTGCATG TPASS_0273 290575 - 291366 + | hypothetical protein TPASS_0274 291904 - 291404 - | possible deoxycytidylate deaminase TPASS_0275 292742 - 291993 - | possible UDP-N-acetyl-D-mannosamine transferase TERM 298 292515 - 292503 - G 72 -4.7 -4.66833 | overlap 292504 292505 CGGCAATCCCAAAAA GCGTG CAC CGCGC ACAATACTGTAGGAT TPASS_0276 293605 - 292721 - | hypothetical protein TERM 299 292914 - 292946 + g 79 -9.9 -3.74077 | gap 1, opp_overlap 292909 GCAAGTATAACCGCC TGCGCGCGCACATC CGGCGT GTTGTGCG-GCGCA TTTGGCTCTGTGGGC ctp 295124 - 293778 - | carboxyl-terminal protease TPASS_0278 295252 - 295380 + | hypothetical protein TERM 300 295827 - 295840 + G 78 -8.1 -4.35483 | TTGGGTTTCGTTTGC GCGCA CAGT TGCGC TTTCTTATCGTGCGG TERM 301 297709 - 297719 + G 72 -6.8 -4.28651 | overlap 297689 GAGGGGGAAGTATCT TCCG TGA CGGA TTTTGGGATTTTCGT rpsA 295426 - 298017 + | ribosomal protein S1 TPASS_0280 298014 - 298142 + | hypothetical protein TPASS_0281 298159 - 298287 + | hypothetical protein TERM 302 298455 - 298443 - g 74 -10.5 -3.14468 | CTTCAGCAGAGGTAA CGCGC ATA GCGCG TGAGTGGGACGTATT TERM 303 298630 - 298640 + G 78 -5.4 -4.87803 | GTACGCACAGGCCTG TGTC GCG GACA TTTTCTTTGCGCGTA TPASS_0282 298280 - 298999 + | hypothetical protein TERM 304 299018 - 299032 + F 77 -11.4 -3.51924 | opp_overlap 299009 299008 GAGAAGCGTTCGCGC CGTGCG GTG CGCACG TTGTGTAGCTAGGAA TERM 305 299502 - 299516 + G 85 -2.8 -5.40072 | ATCGTGCGCTCGACG CTGGTT TAG AAACAG TTTTTTTGGCGGCAA kdtB 299177 - 299656 + | lipopolysaccharide core biosynthesis protein TERM 306 300024 - 300038 + GF 70 -5.6 -4.4009 | overlap 300020 GGATGCGGCGAGCGC CGCGAA GGT TGCGCG TTTTATGCAGTGCGC TERM 307 300186 - 300201 + GF 71 -6 -4.28111 | overlap 300185 GGCTGTCTTTGTTCT GCGCGC AGAC GCGCCC TTTATTGATAGTGTG TPASS_0284 299761 - 300420 + | hypothetical protein TERM 308 300879 - 300907 + GF 83 -9.6 -4.19953 | gap 1, overlap 300879 300883 GTGCGTGATTTGTGC GAATGTGCGCGCA ACAG TGCGCGCAC-TCC TTTTGCCATTGGCTG TERM 309 300883 - 300904 + GF 95 -15.9 -3.11289 | overlap 300879 300879 GTGATTTGTGCGAAT GTGCGCGCA ACAG TGCGCGCAC TCCTTTTGCCATTGG TERM 310 301114 - 301088 - gf 70 -4.5 -4.45544 | gap 1, overlap 301089 301095 CCGTATGAATGAAAA CGA-AAAAGAGC TCGA GCCCTTTTACCG CACGTGGAAGGAGCG TERM 311 301106 - 301095 - gf 79 -3.6 -5.13016 | overlap 301089 301088 AATGAAAACGAAAAA GAGC TCGA GCCC TTTTACCGCACGTGG TPASS_0285 300360 - 301439 + | hypothetical protein TPASS_0286 301411 - 301776 + | hypothetical protein TPASS_0287 301743 - 302366 + | hypothetical protein TERM 312 302673 - 302691 + G 100 -7.4 -5.63517 | TTCGAACCGTCGTGC GGGTTACC GGA GATAACCC TTTTTTGTTTCACGA spsF 302366 - 303313 + | spore coat polysaccharide biosynthesis protein F TERM 313 303497 - 303518 + G 88 -5.2 -5.22312 | gap 1, opp_overlap 303491 GAGAAAGGAGCAGGA TCTGCCTGT GGCAA AC-GGCAGA TTTTTTCCTATACCT TERM 314 304658 - 304674 + G 100 -2.2 -5.75342 | overlap 304660 TGCAGGTGTCACTGG TATGCG TTTTC CGCATC TTTTTTTTGCGCAGA TERM 315 304660 - 304672 + G 70 -4.8 -4.52949 | overlap 304658 CAGGTGTCACTGGTA TGCG TTTTC CGCA TCTTTTTTTTGCGCA TERM 316 304751 - 304736 - g 74 -2.5 -5.0538 | GCGCACGGTAAAAAA GCAGC TCTTGC GCTAC GGTTTTACGGTAAAG TPASS_0289 303336 - 304940 + | hypothetical protein TERM 317 305761 - 305751 - g 100 -3.2 -5.65513 | overlap 305754 GAGGAAGCAAAAAAA CACG CAA CGTA TATTGCCGAATCTAA TPASS_0290 304995 - 305828 + | hypothetical protein TERM 318 306400 - 306420 + G 70 -4.7 -4.56597 | opp_overlap 306400 GACGTTTTGCAAAAC TTCCTATCG TGG TGAAAGGAA TTTTTGCGCCGCGCG TPASS_0291 305865 - 306746 + | hypothetical protein tpn50 306737 - 307990 + | outer membrane protein TpN50 TPASS_0293 308002 - 308178 + | hypothetical protein TERM 319 309301 - 309320 + G 74 -10.6 -3.23395 | overlap 309302 TGTGTCAGGGTTGTT CGCGCGCG TCAT CGCGCGCA TTCATCATAATCAAT TERM 320 309302 - 309319 + G 84 -14.1 -2.53715 | overlap 309301 GTGTCAGGGTTGTTC GCGCGCG TCAT CGCGCGC ATTCATCATAATCAA prs 308156 - 309421 + | phosphoribosyl pyrophosphate synthetase TERM 321 309725 - 309737 + G 72 -4.7 -4.72373 | opp_overlap 309711 GCGGGGGCGTCTGAT CCCCG GTG CGGTG TTTCTCTTTTTTTGC TERM 322 309771 - 309783 + G 73 -4.1 -4.84359 | AGGTTTTGCTCCTTT TGCAG CGA TTGCA TTTTTGTGCGCGTGA xylB 309440 - 310684 + | carhohydrate kinase TERM 323 310762 - 310778 + F 79 -7.9 -4.41206 | GTGTTTGACGTTACG CTCTCGC TGT GCGCGAG TTTTGTCCACTAATT TERM 324 310937 - 310956 + GF 74 -8.5 -3.90588 | AGAGCGGTTTCAAGT GGCTGCG GCTGCG CGCGGCC TTTCGTTACGGCGTA TERM 325 311251 - 311281 + GF 70 -6.8 -4.08706 | overlap 311252 GAGTATCTTTTACTC ACCTTTTACGCAGG TTT TCTGCGCAGAAGGG TTTCTATGCTCAAAG TPASS_0296 310770 - 311405 + | hypothetical protein TPASS_0297 311369 - 312181 + | hypothetical protein TERM 326 313041 - 313056 + G 93 -6 -5.22289 | overlap 313031 313029 AGGGAGTACTTGCGG CCGCGC GGGA GCTCGG TTTTTATGTTTCGTG tpn38b 312314 - 313345 + | exported protein TpN38b TERM 327 313530 - 313569 + G 72 -6.4 -4.42765 | gap 1, overlap 313533 TTCGGGCGCGCGTGA GACGGACG-CGCTGAGCAC AGC GTGCTCAGCGATGTGAATC TTTCCTTTTTTACCG TPASS_0299 313342 - 313566 + | hypothetical protein TERM 328 313912 - 313937 + G 82 -2.5 -5.42131 | overlap 313913 313914 AGAAGGAAGAATACG TTGCATGTTTG AGTG CAGACAAGCGG TTTTTTGTATCGTTG TERM 329 314010 - 314028 + G 87 -4.5 -5.20781 | gap 1, overlap 313997 GAGCCGCGGTGTGCT CCG-GCGC AATC GCGTGCGG TTTTCTTTTCTCATC rbsA1 313551 - 315101 + | ribose/galactose ABC transporter, ATP-binding protein TERM 330 315681 - 315696 + G 100 -3.2 -5.86061 | ATGCGTCCTTAGTAG CACTCG CAGT TGGGTG TTTTTTTTCGTACAC TERM 331 315867 - 315879 + G 74 -3.3 -4.9725 | TTGGGCTGTTTGGCA CCTGC TAT GTGGG TTTTTCTGTGGGGAT TPASS_0301 315098 - 316231 + | hypothetical integral membrane protein TPASS_0302 316222 - 317163 + | hypothetical integral membrane protein mutL 319096 - 317150 - | DNA mismatch repair protein MutL TERM 332 317247 - 317268 + g 72 -10.9 -3.09516 | opp_overlap 317245 317244 GGTAATGCAAAAGCC TGCTCCACT AACG AGTGGAGCG TTGCGTCATCCAGGA TERM 333 317332 - 317351 + g 77 -3.4 -5.1675 | overlap 317333 AGGTAGCGAGGACGT GGCGCAGG ATGT CGTGCGCG TTTTTTCCTGAGTAG TERM 334 318232 - 318211 - G 73 -3.6 -4.7629 | overlap 318203 318213 TGACGAAGGTAAAAA TACCGCGG CGTTCT CTGCGGCA GATGGCGGGTTCTGA TERM 335 318603 - 318619 + g 77 -12.3 -2.81272 | overlap 318602 ACCGGCGGTACGTGC GCTGCAG TGC CTGCAGC CTTTGGCTGGTAGTG TERM 336 318942 - 318954 + g 85 -3.3 -5.42862 | overlap 318928 GGCCGCTCGATGACT TCTCC TGC GGCGA TTTTTTTAGCGGTGT TERM 337 319031 - 319020 - G 71 -2.2 -4.99035 | TCATGCATAGAAAAA CCCT TGCC AGAG CGTAGACAGCCAGCT TPASS_0304 322225 - 319109 - | hypothetical protein TERM 338 320071 - 320058 - GH 79 -4.5 -4.96848 | overlap 320060 TTGCCCACATAAAAA GAGCT TTTC AGCCC CAGCGAGGTAAAAAA TERM 339 322147 - 322162 + gH 79 -4.6 -4.89838 | ACACGCTACACTCGT GCCGTA TGGA TCCGGC TTTTATCTTTATTAC TERM 340 322538 - 322523 - gH 73 -11.8 -2.68279 | overlap 322520 TACGGATGAAATCCA GGCGCG AATT CGCGCC GCTGCTGCTACCACG TERM 341 323790 - 323801 + GH 75 -4.4 -4.77165 | TTTTTCGGCGTGCAG TTCC ACCC GGAA TTTTGTTCTCGACCG pyrG 322152 - 323885 + | CTP synthase rpsD 324050 - 324664 + | ribosomal protein S4 TPASS_0307 324751 - 325779 + | hypothetical protein TERM 342 326157 - 326173 + G 79 -4.3 -4.98531 | overlap 326136 CGTTTGCCGTAACGG CTCGGCG CCG CACTGAG TTTTTACTTTCCGAG hisJ 325754 - 326719 + | amino acid ABC transporter, periplasmic binding protein TERM 343 326729 - 326754 + F 100 -5.4 -5.51402 | gap 1, opp_overlap 326721 326732, overlap 326732 GAATAAAGGTGCAAG GCAGCGGTGCG TTTTT TGCACTGC-GC TTTTTTTGCGTGTGT TERM 344 327407 - 327422 + GF 73 -11.8 -2.72109 | overlap 327406 CGCTCTGCGCAGTGA CGCCGC ACCT GCGGCG CTTGTATCGAATTTT TERM 345 327518 - 327542 + GF 74 -6.3 -4.52857 | ACATGGTTGTGCGCA CTCTGTCGCAG CTG CAGCGAGAGGG TTTTGTGTCAGCGCT TPASS_0309 326785 - 327603 + | amino acid ABC transporter, periplasmic binding protein TERM 346 327679 - 327709 + GTF 91 -11.1 -4.27316 | gap 1 CGTTCCATCTGCTTC CGCGCGCGC-GCCG GAGG CGGCCGTGTGTGCG TTTTGCATTCAAACG TPASS_0310 327572 - 327955 + | hypothetical protein TPASS_0311 328077 - 327934 - | hypothetical protein TERM 347 328270 - 328288 + GH 80 -11.7 -3.2964 | overlap 328263 GGGGATAGGGGTGTG CGCACGC TTTAT GCGTGCG TTGTACGAAGCATTT TPASS_0312 328061 - 329074 + | hypothetical protein TERM 348 330093 - 330104 + G 70 -4.4 -4.57073 | AGCGTGCACAGGAGG TTGC ACTG GCAA TTTTTACGCACGCTG tprE 329165 - 331453 + | protein TprE TPASS_0314 331656 - 331510 - | hypothetical protein TPASS_0315 332326 - 331679 - | hypothetical protein TERM 349 332022 - 332051 + g 86 -14.3 -2.93857 | gap 1, opp_overlap 332021, overlap 332018 332049 TCCAGCCCCACCAAC GGTGTCTCCGGCGC ATA GCG-CGGAGGCGCC TGGTTCTCTGTATCT TERM 350 333259 - 333297 + r 81 -13.2 -3.00525 | gap 1, overlap 333253 TCAGCTGCAGCTGTG CCCACACCC-CTGAGCG TGCCTC CCCTCGGCGGGTGTGGG TGTGCTTTGACACCA tprG 335843 - 333573 - | protein TprG TERM 351 334870 - 334880 + gr 85 -6.8 -4.84529 | GCATATTCGTCCAGC CAGG CTT CCTG TTTTTGACTTTCTCC TERM 352 334914 - 334941 + gr 71 -11.2 -2.94938 | overlap 334916 334935 GAAGAGGTTATTTGA GAGGGCGGTGAG TTCA CTCTGCGCCCTC TGTGTGCGATTTTGA TPASS_0318 335974 - 335795 - | hypothetical protein TERM 353 336021 - 336036 + G 83 -6 -5.02074 | AGAGAGAAGTGGGTA CGCGCG TTTG CGGGCG TTTTTTGCGCCATGC tmpC 336003 - 337064 + | membrane lipoprotein TmpC TERM 354 337060 - 337117 + F 90 -4.8 -5.38054 | opp_overlap 337065, overlap 337068 337071 337075 CTGCACGCATGATGA AC-TAAGGGGGAGAGGTGCCTCCCGTGC CTGC GCGCGGGAGGC-CTTCTTCTTCATCTGA TTTTTGTTTGTACGG TERM 355 337068 - 337108 + F 100 -18.4 -3.39138 | gap 1, opp_overlap 337065, overlap 337060 337071 337075 ATGATGAACTAAGGG GGAGAGGTGCCTCCCGTGC CTGC GCGCGGGAGGC-CTTCTTC TTCATCTGATTTTTG TERM 356 337071 - 337105 + F 100 -16.5 -3.80452 | gap 1, opp_overlap 337065, overlap 337068 337060 337075 ATGAACTAAGGGGGA GAGGTGCCTCCCGTGC CTGC GCGCGGGAGGC-CTTC TTCTTCATCTGATTT TERM 357 337075 - 337102 + G 100 -14.8 -4.0156 | opp_overlap 337065, overlap 337071 337068 337060 ACTAAGGGGGAGAGG TGCCTCCCGTGC CTGC GCGCGGGAGGCC TTCTTCTTCATCTGA TPASS_0320 337074 - 337229 + | hypothetical protein TERM 358 338713 - 338729 + GF 71 -5.7 -4.31085 | CCGAACGTAATCGGG GGGGTGC AGT GCTCCTC TTTTCCCTTGATATG rbsA2 337305 - 338906 + | ribose/galactose ABC transporter, ATP-binding protein rbsC1 338816 - 340018 + | ribose/galactose ABC transporter, permease protein rbsC2 340015 - 340965 + | ribose/galactose ABC transporter, permease protein TERM 359 341557 - 341585 + G 81 -9.6 -4.03234 | gap 1, opp_overlap 341530 341531 TAACACTGCAGTTAC GGTGCGCAGCG ATTCCAGA CGC-GCGCACC TTTCTGTGCCGCAGG TERM 360 342479 - 342492 + G 70 -5.9 -4.15044 | TACCTTGCCGCGAAT GCGGG CAGT CTCGC TTTCTTGAGGCACAC TPASS_0324 341069 - 342526 + | hypothetical protein TERM 361 343642 - 343674 + G 74 -9.8 -3.53012 | GTGCCGGGTCAGGCG CGTGCGTGGGTGCG CACCA CGTACTCAGGCGCG TTTGAAGGGCAGCCG TERM 362 344688 - 344706 + G 81 -6.6 -4.66537 | overlap 344689 GTTTGAGTTCATAGC CGATCCGG TTT CCGGGTCA TTTTATGTTCGCGGG TERM 363 344689 - 344705 + G 72 -10.1 -3.3944 | overlap 344688 TTTGAGTTCATAGCC GATCCGG TTT CCGGGTC ATTTTATGTTCGCGG TPASS_0325 342508 - 345474 + | hypothetical protein TERM 364 345638 - 345657 + G 82 -3.4 -5.28176 | GCTCGAATATATTGC TCGCGGCC AGTT GGACACGA TTTTTTCTCAATACA TERM 365 345729 - 345719 - g 72 -6.8 -4.18401 | opp_overlap 345712 345719 GGAGATACTGCAAAA GGTC TAT GACC TTGAGTACTTTTCTG TERM 366 346127 - 346141 + G 74 -2.7 -5.02074 | overlap 346119 CAAGAAGGTGCTTTC CACGC AGGAG GCGCG TTTTTTGACCAGTGG TERM 367 346412 - 346433 + G 78 -10.9 -3.5394 | overlap 346431 TAGGCTCAAGCGCGG GGCCATCAT GAAT ATGGTGGCC TTTGAGCAGGGCTTT TERM 368 347371 - 347381 + G 77 -6.8 -4.56597 | overlap 347337 TTGCGTACGACCCGT CCAG CGG CTGG TTTTTAGGACAGCGC TPASS_0326 345456 - 348017 + | outer membrane protein TERM 369 348197 - 348213 + G 72 -10.1 -3.39327 | ACCTTTTGGCGCGAT TCGCGCG TCC TGCGCGA TTATGAATCTAAAAA TERM 370 348398 - 348387 - g 70 -5.8 -4.15565 | TGGAGTATTCTAAAA CGTC CAAC GACG AGCTCACCGCGCTGC ompH 348074 - 348592 + | cationic outer membrane protein TERM 371 349246 - 349257 + G 81 -7.2 -4.72272 | TCGTTCGTACCACCG GCGC AGAT GCGC TTTTTAATCCCGAGC TERM 372 350439 - 350453 + G 90 -11.4 -3.87075 | GTGGTGGAACTTCAT CTCCCC TCC GGGGAG TTTGTACCCAATGAT mutS 348648 - 351350 + | DNA mismatch repair protein MutS TERM 373 352348 - 352333 - g 72 -4.6 -4.62984 | opp_overlap 352333 352337 352343, overlap 352326 GTACCACACACAAAA CGTTGC GCGG GCCACG CGGTGCCTTTATTTT TERM 374 352343 - 352355 + G 71 -3.3 -4.83243 | opp_overlap 352333, overlap 352337 352333 CAAAACGTTGCGCGG GCCAC GCG GTGCC TTTATTTTGTGTAAA TERM 375 352796 - 352779 - g 79 -9.8 -3.78172 | overlap 352774 GAAATGAAAAGAATA GCGCGC CTGATC GCGCGC GTGCTCGGCGCTGCA TERM 376 353145 - 353165 + G 70 -4.6 -4.53475 | overlap 353146 TTGCGTGAGGCCCCG TGTCTCCC ATTGA GGGAGCCG TTATTTTTCTCCCAT glyA 351468 - 353192 + | serine hydroxymethyltransferase TPASS_0330 354962 - 353166 - | possible cell division protein gnd 356658 - 355192 - | phosphogluconate dehydrogenase TERM 377 355775 - 355755 - G 76 -3.9 -4.93365 | opp_overlap 355755 CGGGAGAACCAAAAA CGCGATG TGCCTTG CAGCGCG CTTGCTTTTGCGCAG TPASS_0332 356674 - 356799 + | hypothetical protein TPASS_0333 356837 - 357529 + | hypothetical protein TERM 378 357873 - 357921 + G 82 -7.9 -4.54449 | overlap 357874 357919 TTGCCTGTGTGCTCT TCCTGGGTGGGGTGCTGGGTGTG TAT TACGCGCGGCACCGCGCGCTGGG TTTTCTATCCCGTAT TPASS_0334 357554 - 358771 + | hypothetical protein TPASS_0335 359310 - 358768 - | hypothetical protein TERM 379 358843 - 358853 + gF 95 -8.2 -4.92669 | overlap 358795 358846 TGCGCTTGCGCGCGC GCGG GAG CCGC TTCTTTTTTTCTCTC TERM 380 358846 - 358856 + gF 100 -3.2 -5.80248 | overlap 358795 358843 GCTTGCGCGCGCGCG GGAG CCG CTTC TTTTTTTCTCTCTTA TERM 381 358934 - 358878 - Gf 81 -6.5 -4.82901 | gap 3, overlap 358881 358912 TCTCTCTTACAAAAA GTACCCGTAGCGCTGCGCC-CGCAGCTC CTGC AAACAGCGTGGCGCTGC-CTGCGGGC-C GGTGTGCAAGAGCAA TERM 382 358932 - 358881 - Gf 80 -11.5 -3.31915 | overlap 358878 358912 CTCTTACAAAAAGTA CCCGTAGCGCTGCGCC-CGCAGCTC CTGC AAACAGCGTGGCGCTGC-CTGCGGG CCGGTGTGCAAGAGC TERM 383 358924 - 358912 - Gf 71 -9.1 -3.53811 | overlap 358881 358878 CGCAGCTCCTGCAAA CAGCG TGG CGCTG CCTGCGGGCCGGTGT TERM 384 359120 - 359084 - Gf 100 -10.1 -4.9725 | overlap 359085 AGCCGTACATAAAAA GCTCCCCCTTCCCCTTC TGG GAAGGGAAACGGTGAGG GAAGAGAAAAACAGA TERM 385 359119 - 359085 - Gf 100 -13.6 -3.57627 | overlap 359084 GCCGTACATAAAAAG CTCCCCCTTCCCCTTC TGG GAAGGGAAACGGTGAG GGAAGAGAAAAACAG TERM 386 359419 - 359434 + GH 73 -6.1 -4.38322 | overlap 359416 TGGGTGTTTGTTGGT CCGCA GTGGTG TGCGG TTCTTTTCTCGTTGG TERM 387 359793 - 359821 + GH 72 -11 -3.02511 | gap 1, opp_overlap 359793 ACGCTACCGATATGA CGGAC-GACGCGG ATGC CCGCGTCTGTCAG TATTACGCGCGTGGG TPASS_0336 359153 - 360853 + | possible protein ComE TERM 388 361003 - 361029 + G 72 -7.2 -4.25104 | GTGTATGGGAAATTG GTGCAGGCATTG GTG CGATGACCGCAC TTTTGGTGCAAAACA ksgA 360834 - 361691 + | dimethyladenosine transferase TPASS_0338 361709 - 362197 + | hypothetical protein TERM 389 362298 - 362317 + G 100 -3.6 -6.22802 | overlap 362300 GACGTGTCGGTGTGA TGTGTTCT GCGC AGAACATG TTTTTTTTTGTGCAC TERM 390 362300 - 362315 + G 81 -6.2 -4.76409 | overlap 362298 CGTGTCGGTGTGATG TGTTCT GCGC AGAACA TGTTTTTTTTTGTGC TERM 391 362664 - 362680 + G 76 -10.9 -3.32294 | TCCCGATTTTTTCAG TACCCTG CGT CAGGGTA TTGTGCACCGTTTGG TPASS_0339 362209 - 363204 + | hypothetical protein folC 364662 - 363190 - | folylpolyglutamate synthetase TERM 392 363703 - 363718 + g 81 -4.6 -5.08824 | overlap 363700 363704 ATATTTTGCCGCGCA CGCAGC CAGT GCTGCA TTTTTTGCCTGAACA TERM 393 364198 - 364208 + g 91 -5.4 -5.42862 | CTGGCCGTAGTCGCG CAGA TTC TCTG TTTTTTTCACCGTGT TERM 394 364283 - 364270 - G 90 -4.5 -5.44119 | opp_overlap 364270 GGCAGGTGAAAAAAA CACAC CCGC GCGTG TTATTCTCTCTCTCG TERM 395 364479 - 364493 + g 70 -5.6 -4.37886 | TGTGCAGAGGTGGTG TGCCGC TTG GGGGCA TTTTCTCAAGCGTGC TERM 396 364545 - 364535 - G 70 -4 -4.60041 | ACCCAGGCGTAAAAA TCTT GAA AAGA ATGCACCGGTATATG murC 364681 - 366126 + | UDP-N-acetylmuramate--alanine ligase cmk 366247 - 366807 + | cytidylate kinase TERM 397 367251 - 367262 + G 79 -2.2 -5.27938 | ACAAACATCCGTGCA GTGT TTAT ACGC TTTTTCTTTCCCGAT TPASS_0343 366801 - 367634 + | possible A/G-specific adenine glycosylase trcF 371061 - 367639 - | transcription-repair coupling factor TERM 398 369889 - 369855 - G 70 -4.3 -4.49756 | gap 1, opp_overlap 369856 369858, overlap 369849 369856 CTGCAAAGACGAAAA CGTGCCA-TCCGTCTT TTGA AAGACGGAGTAGCTCT TCTTTGAAGTAAGGA TERM 399 370753 - 370713 - G 81 -9.5 -4.07885 | opp_overlap 370716, overlap 370717 CACGCTGGGTGAAAA CGAACGCGCATGGCGCGGT TGC ATCGCGCTGTGCGAGTGCG CACAGCGCCTCTACC TERM 400 370729 - 370717 - G 81 -10.5 -3.66908 | opp_overlap 370716, overlap 370713 CTGGGTGAAAACGAA CGCGC ATG GCGCG GTTGCATCGCGCTGT TERM 401 370967 - 370951 - G 74 -3 -5.02074 | gap 1, overlap 370954 GTATTCGCCAAAAAA GTAGGAC CGCA GTCC-AC CGGTGCACCCTTCAA TERM 402 371008 - 370996 - G 73 -9.1 -3.65199 | opp_overlap 371003 AACGCGGTAGGGAAA GCGTG CGG CACGC AGCGAGCGCAGCGCA mraY 371214 - 372305 + | phospho-N-acetylmuramoyl-pentapeptide-transferase TERM 403 372506 - 372526 + GF 71 -3.1 -4.74103 | overlap 372508 AGCGGTGTGTGCGGT GACGGCGTG TGC CGGGCCGTG TTTTTGCGTTCAAGC TPASS_0346 372462 - 373163 + | hypothetical protein TPASS_0348 375105 - 373696 - | hypothetical protein TPASS_0347 373132 - 373962 + | hypothetical protein TERM 404 374694 - 374670 - GT 88 -12.1 -3.64716 | overlap 374668 CCAGCGCGCAAAATA GCGGGAGTACG TAC CACACCCCCGC GCCAAAAACGAGCAC TERM 405 374878 - 374866 - GT 80 -5.5 -4.91357 | AAATACATAAGAAAA GAGCG TCC CACTC ACCAGAGCCTGCCCT slyD 375605 - 375075 - | peptidyl-prolyl cis-trans isomerase, FKBP-type proA 375819 - 377105 + | gamma-glutamyl phosphate reductase TERM 406 377096 - 377114 + F 72 -3.7 -4.72272 | TGGAGAGGGGCAGGT GCGTCCG TGATC CGTGCGC TTTTTGCTGCGGCAA TERM 407 377181 - 377194 + G 77 -6.7 -4.57837 | CGCAGGCAGATGGTA CTCCT GATG AGGAG TTTTTGGCGGAGTGT TERM 408 377696 - 377708 + G 70 -4.1 -4.67982 | GCGCTGTTGTGGCAG GCAGA TCT TTTGC TTTTGTTGAGTGACA proB 377102 - 377992 + | glutamate 5-kinase TPASS_0352 378124 - 378381 + | hypothetical protein rnhA 378887 - 378378 - | ribonuclease H TERM 409 378729 - 378755 + g 90 -13.1 -3.43288 | gap 1, overlap 378725 TGTGCTCGGGTAGGC GCTGCCGC-TTC TAGT GAATGCGGCAGC TTCTGGTGCSSTTTG tmk 379150 - 379776 + | thymidylate kinase TPASS_0355 380126 - 379743 - | hypothetical protein TERM 410 379878 - 379866 - G 81 -9.1 -4.07568 | GCGTGCTCGGTAAAA CGGTG CTG CACCG GCGCAGCATAAGCAA TPASS_0356 380331 - 380648 + | possible RNA-binding protein TERM 411 381303 - 381317 + G 73 -11.4 -2.7674 | overlap 381301 CCTGTGTCATGGCGC CGCCGA GTA TCGGCG TGCTTGAGTCGTGTC birA 380750 - 381490 + | biotin--acetyl-CoA-carboxylase ligase TPASS_0358 383075 - 381495 - | hypothetical protein TERM 412 381722 - 381710 - G 72 -5.5 -4.55287 | opp_overlap 381718 GCGACTGACACAAAA GCACA TCA CGTGC TGCCATGTTCAGTAG TERM 413 381904 - 381885 - G 86 -5.8 -5.1615 | gap 1 TGAAGATCCAAAAAA GGGT-TCAA TGA TTGACACCC CCACTGCGGGGCAGG TERM 414 382135 - 382145 + g 81 -4.6 -5.15167 | opp_overlap 382113, overlap 382126 382109 GCATCAGCGACACAC GTGC GTT GCGC TTTTTCTTGCTCATA TPASS_0359 383722 - 383087 - | hypothetical protein TERM 415 383951 - 383940 - g 70 -5.8 -4.28994 | overlap 383941 TAGGAGGTATGAAAA TGGC TGGT GCCA GCAAAAATTCGCGTA TPASS_0360 383933 - 384109 + | hypothetical protein TPASS_0361 384954 - 384106 - | possible lysophosphatidic acid acyltransferase TERM 416 384180 - 384195 + g 72 -6.8 -4.1899 | GCCAGACGTCTAGCT GCGCTT GAAT GAGCGC TTTTGCCTCGCGTAG TERM 417 384621 - 384580 - G 70 -10.1 -3.17219 | gap 1, opp_overlap 384584 CACAAGGGGGACGAA GCGCGCGAGCTCTCGCTTTG CTA CGAAGCGCAACCTCG-GCGC ATCAATATAGCCAAA TERM 418 384979 - 384966 - H 76 -9.5 -3.90318 | opp_overlap 384966 384965 GCATTATGCCATAAA GCGCG CGTG CGCGC CTTTACTCTGGCGGA TERM 419 385096 - 385141 + G 71 -11.1 -2.84919 | gap 1, opp_overlap 385094 385121, overlap 385093 GTGAGTAAATCGATG CAC-CACTGCAAGCGGGTGTGG AAA CCGAACCTGCTCGCAGTGAGAG TAGTTGTAGATGGCT rpmB 385030 - 385266 + | ribosomal protein L28 TERM 420 386225 - 386210 - g 71 -9 -3.53012 | GGTGTCTTCGCCAAA TGCAGC CGAA GCTGCA AAGGGGACCGCGGTA TERM 421 387062 - 387072 + G 100 -5.4 -5.59655 | AGCAGAGGCTGTCGG TGTC TTT GACA TTTTTTCTTCGTTTG cheA 385758 - 388196 + | chemotaxis histidine kinase cheW1 388190 - 389557 + | purine-binding chemotaxis protein cheX 389579 - 390043 + | chemotaxis protein cheY 390056 - 390490 + | chemotaxis response regulator TERM 422 390567 - 390601 + F 83 -7.7 -4.6645 | overlap 390569 CTTGAGGTTTTTGCC TTCGCGCGCGGAGTG CCCGT CTCTCTGCGTGCGTG TTTTCTGTGTGTGTG TERM 423 390569 - 390599 + F 93 -12.5 -3.9328 | overlap 390567 TGAGGTTTTTGCCTT CGCGCGCGGAGTG CCCGT CTCTCTGCGTGCG TGTTTTCTGTGTGTG TERM 424 391652 - 391639 - g 82 -9.5 -4.26019 | CAATGATATGGAAAA GCGCG TTGA CGCGC TCCAAAAGGAAATCT TERM 425 392618 - 392632 + G 77 -11.4 -3.16742 | GGGGAGCGGGTGGCG GCGCTC GAA GAGCGC TTACTAGAGGTTGAA TERM 426 393053 - 393031 - g 82 -13.4 -2.95116 | overlap 393028 TCAGGAGGTAAAGGA GCGCTACGAG TTT CTCGTTGCGC AGGTTGCGGACCTTG TPASS_0367 390794 - 393619 + | possible chromosome segregation protein TPASS_0368 393619 - 393954 + | hypothetical protein TERM 427 394218 - 394197 - g 78 -8.7 -4.19624 | GAGCGGGAACAGAAA CCTGAGTCT TCGA AGCCTCAGG TGGTAGAGCCGGTGT TERM 428 395280 - 395290 + G 75 -6.8 -4.42464 | opp_overlap 395261 CGAGATGCCCTCGCT TCGC TCG GCGA TTTCTTTGCGCAGTT TERM 429 395406 - 395381 - g 77 -8.3 -4.12532 | overlap 395367 395366 395382 CGGCGCACAGAGAAA CGTACGCCTCG CGCT CGAAGCATACA AGACAATACTGGAAC TPASS_0369 393951 - 395501 + | hypothetical protein TPASS_0370 395985 - 395569 - | hypothetical protein TERM 430 395856 - 395880 + gF 100 -7.1 -5.53436 | overlap 395858 395859 GAGCGCACACGCTGT CAACTGTGCCT AAT AGGCACAGGTA TTTTTTCTCTTGTGT TERM 431 395858 - 395878 + gF 90 -9.7 -4.38219 | overlap 395856 395859 GCGCACACGCTGTCA ACTGTGCCT AAT AGGCACAGG TATTTTTTCTCTTGT TERM 432 395859 - 395877 + gF 87 -13.2 -3.20491 | overlap 395858 395856 CGCACACGCTGTCAA CTGTGCCT AAT AGGCACAG GTATTTTTTCTCTTG TERM 433 396165 - 396180 + GH 83 -8.2 -4.40358 | opp_overlap 396156 AGAAAACACGCTGAC CCGTGC GTAT GCGCGG TTTTGTCAGGTAACT TERM 434 396584 - 396618 + GH 90 -5.7 -5.18357 | gap 1, overlap 396582 396578 GGGCTACCGCGCTTT CTGCGCACTATGCACA GGAT TGTGCGCGGTG-GCGG TTTTTTAATAGCTTA TPASS_0371 395959 - 396834 + | hypothetical protein ctc 396956 - 397546 + | general stress protein TERM 435 397846 - 397862 + GF 83 -5.7 -4.91511 | GATGCGCGTTTTGTG CGTGCGC TGT GTGCTCG TTTTTCTCCTCCCCT TERM 436 398351 - 398372 + GF 70 -8.7 -3.65522 | GCTTTTGTGTTGCTG CCTTGACGC GGTG GCGTGAAGG TTGTTCGCATGCGTG TPASS_0373 397606 - 399039 + | hypothetical protein TERM 437 399861 - 399813 - gf 73 -8.8 -3.81951 | gap 1, opp_overlap 399837 CCTCATATGAGCAAA GCACGCGCGCAGGGGATTCTGCT CCTG AGCAGGAGCTG-TACGCGCGTGC CCAGTCAATTGTGTT TERM 438 400096 - 400114 + GF 77 -8.1 -4.1673 | overlap 400097 TGCAAGTCGGCCGAT TCGCGCA CGTTT TGCGCGG TTTCTTGCGGAGTTC TPASS_0374 398975 - 401350 + | hypothetical protein TERM 439 401505 - 401517 + F 91 -4.1 -5.54079 | overlap 401498 401506 ATCTGGCTGAGAAAG TGGAT GGC ATCCG TTTTTTCCTTTTTAC TPASS_0375 401508 - 401717 + | hypothetical protein TPASS_0376 402938 - 402033 - | hypothetical protein TERM 440 402106 - 402116 + g 70 -6.8 -4.07568 | opp_overlap 402115, overlap 402078 GCAGCATGCGGATGG GCTG CAA CAGC TTTTCGCAAGCACGC TERM 441 402239 - 402267 + g 73 -4 -4.80178 | gap 1, opp_overlap 402239, overlap 402263 GTGACTGCGCTAAAT CCTTGTAAGCA TTCCCCGC TGCT-ACAAGG TTTTCTTGCTTGATA TPASS_0377 403007 - 403132 + | hypothetical protein TERM 442 403401 - 403349 - g 70 -10.5 -2.76201 | opp_overlap 403347 403353 403358, overlap 403346 AAAAAGAACAACTGA GACGTGCGTCTCTTGCGTGGTGTGC ACA GCACACCGCGCAAGAATTGCATATG CTTGGCCCCGAGCAG TERM 443 403353 - 403397 + G 100 -20.1 -2.90075 | opp_overlap 403349 403346, overlap 403347 403358 AGAACAACTGAGACG TGCGTCTCTTGCGTGGTGTGC ACA GCACACCGCGCAAGAATTGCA TATGCTTGGCCCCGA TERM 444 403358 - 403392 + G 100 -19.4 -3.16267 | opp_overlap 403349 403346, overlap 403347 403353 AACTGAGACGTGCGT CTCTTGCGTGGTGTGC ACA GCACACCGCGCAAGAA TTGCATATGCTTGGC TPASS_0378 403129 - 403509 + | possible flagellar protein secA 406334 - 403584 - | preprotein translocase subunit TERM 445 403939 - 403949 + g 82 -3.2 -5.28176 | TCAAGAAGTTCCAAA TGGT CCA GCCA TTTTTTATCGATCGC TERM 446 404105 - 404142 + g 70 -3.9 -4.63218 | TCCAGCCAGATGCGT CCTCACCTCCCAGTGCG TAAT CGAACAGGGTGCTCAGG TTTTGTTGAAACGCC TERM 447 404903 - 404921 + g 75 -5.2 -4.66264 | overlap 404904 GTTTTACACCGCGTG TTCTCAGC AGA GCAGAGAG TTTTTCGGACTTTTC TERM 448 405995 - 406006 + g 70 -5.8 -4.27316 | GATACGCCGCTGCCA CGCT CATG AGCG TTTTGCCTTCGCCCG TERM 449 406243 - 406229 - G 73 -11.4 -2.81547 | overlap 406210 406226 CCTGGAGAGGAAGTA CCCAGG ACT CCTGGG CGTTGACGGCATTCA TERM 450 406391 - 406366 - R 89 -3.1 -5.63103 | overlap 406369 CTTGAACCAAAAAAA CAAGGGAGACC GCAC GGTCACCCCCT CCTCCCCCCCCCCTC TERM 451 406388 - 406369 - R 100 -9.2 -4.88485 | overlap 406366 GAACCAAAAAAACAA GGGAGACC GCAC GGTCACCC CCTCCTCCCCCCCCC TPASS_0380 408261 - 406441 - | possible DNA repair helicase TERM 452 407336 - 407348 + g 79 -4.7 -5.01732 | ATACCGATGGATGTC CCGTC CAG GTCGG TTTTTTCACACAATT TPASS_0381 409115 - 408399 - | hypothetical protein TERM 453 408958 - 408947 - G 88 -2.2 -5.50499 | CCAGACGCAAAAAAA GGAT TGCA ACCC CCGCGCGCGCTAGGT TPASS_0382 409199 - 409321 + | hypothetical protein TPASS_0383 409349 - 409798 + | hypothetical protein TERM 454 410465 - 410508 + G 86 -12.4 -3.54919 | gap 1, overlap 410466 GGATTGCGCAGGCGG TGTGCGCGCAGCGTCGGCAGG CGC CCTTTTG-CTCTGCGCGCGCA TTTGCAGAAGTCGTT TPASS_0384 409795 - 410934 + | hypothetical protein TPASS_0385 410947 - 411321 + | hypothetical protein TERM 455 411403 - 411423 + G 84 -7.5 -4.68209 | GGTTTCCTTTGACAG TCGTGCGGT TGT GCCGCGTGA TTTGTTTATTCCGCT TERM 456 411968 - 411956 - g 91 -3.4 -5.47159 | opp_overlap 411949 411946, overlap 411949 GCGGAAGAGAAAAAA GAGA TTTTT TCTC AATTTACTGAACACA murF 411305 - 412684 + | UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine TERM 457 413476 - 413492 + G 82 -2.2 -5.3658 | overlap 413477 AAAATTGCGAGCGTG CCCGAA GTATA TTCGGA TTTTATTTTTGTCGT ftsW 412681 - 413835 + | cell division protein ftsQ 413813 - 414628 + | cell division protein TERM 458 415665 - 415676 + G 72 -4.4 -4.72272 | overlap 415634 415633 CCGGTGCGGTAGAGC TTGC GTCA GCAA TTTTTGATACACCGC ftsA 414641 - 415885 + | cell division protein ftsZ 415931 - 417187 + | cell division protein TERM 459 417575 - 417592 + GF 78 -10.5 -3.44353 | overlap 417574 TGTGCACACCAGGTG GCGTGCG TGAT CGCGCGC TCTTTGAACTTATTT codV 417184 - 418104 + | integrase/recombinase TERM 460 418124 - 418144 + GF 77 -3.1 -5.11718 | overlap 418125 TGTGCGTCATATGTG GGCGGTGCA CTG TGCGCGGCG TTCTTTTTTTTTCAT TERM 461 418501 - 418485 - gf 73 -3.6 -4.77567 | opp_overlap 418486, overlap 418486 ATCCTGAGAAGAAAA TGCAGC AGCAA GCTGCT TATCGCGCGTTAGCA TPASS_0392 417887 - 418846 + | hypothetical protein smf 418843 - 419751 + | protein Smf TERM 462 421009 - 421023 + G 82 -9.2 -4.18494 | opp_overlap 421009, overlap 421017 TGACGTTTGAAATTA CCGCTG GCC CGGCGG TTTTCAGTGCAACTG TERM 463 421322 - 421311 - g 70 -3.6 -4.66163 | opp_overlap 421314, overlap 421314 ACTCGTATTCAAAAA CAGC TAAT GCCG ACCCCATTGGGAAAG topA 419784 - 421979 + | DNA topoisomerase I xprB 421972 - 422865 + | integrase/recombinase flgB 423013 - 423423 + | flagellar basal-body rod protein flgC 423508 - 423897 + | flagellar basal-body rod protein TERM 464 424176 - 424159 - g 72 -5.5 -4.56914 | opp_overlap 424162, overlap 424126 424160 TCAGGTAAATCAAAA GCAGCAG AAGA CTGCTGA GTTGACCGAGCAAAT fliE 423953 - 424327 + | flagellar hook-basal body complex protein TERM 465 424791 - 424773 - g 77 -3 -5.0538 | opp_overlap 424775, overlap 424775 TTTGATCCCAAAAAA TGTGGACC CAT GGGCCATA TTCGACGTCGAGCGA TERM 466 425867 - 425887 + G 79 -3.9 -5.10033 | overlap 425870 TGATCATCTTATACT CCCTTGCCA GTG TGGCAATCG TTTTATTTATCTTCA fliF 424444 - 426147 + | flagellar basal-body M ring protein fliG2 426152 - 427210 + | flagellar motor switch protein TERM 467 427890 - 427873 - g 73 -9.1 -3.67175 | overlap 427874 ATTTCTGAAAACCAA CGCGCTG TTAT CAGCGCA AATGTGGTGCATGCG fliH 427258 - 428187 + | flagellar assembly protein TERM 468 428524 - 428538 + G 74 -10 -3.53343 | opp_overlap 428511 GATGCTTTACTCGGA CGCGTT TTG AACGCG TTTGGGAAGGCAATT fliI 428215 - 429558 + | flagellum-specific ATP synthase TPASS_0403 429587 - 430039 + | possible flagellar protein TPASS_0404 430569 - 430036 - | hypothetical protein TERM 469 430426 - 430413 - G 74 -2.3 -5.06414 | TGCGGGTAAGAAAAA CAGCC GTCA GGGTG CAGGAATTCTTTTCA TPASS_0405 431015 - 430566 - | possible protein McbG TERM 470 431376 - 431408 + G 85 -8.5 -4.56775 | overlap 431378 ACAGATTATTGCGCG TGCGTCTGCAGTTTT GCA GAAAGTGCAGACGAA TTTTTCACCACACAT murI 431206 - 432012 + | glutamate racemase gph1 432140 - 432814 + | phosphoglycolate phosphatase TERM 471 436022 - 435993 - g 76 -4.2 -4.9448 | gap 1, overlap 435995 ATCCAGCAAACAAAA TA-CCCGGTGCGG GAGCG CCGCCCCTGGCTA CACGTCAGAATGTGG TERM 472 436019 - 435995 - g 77 -8.4 -4.08958 | overlap 435993 CCAGCAAACAAAATA CCCGGTGCGG GAGCG CCGCCCCTGG CTACACGTCAGAATG TPASS_0408 432893 - 436147 + | hypothetical protein TPASS_0409 436187 - 436372 + | hypothetical protein TERM 473 437049 - 437081 + G 71 -9.2 -3.53224 | gap 1, opp_overlap 437049 437047 437046 437051, overlap 437051 437054 TGAAGATGAAAAGGA GA-CAGGCCCAAGCT GTCA AGCTCGGGCTTGATC TTTCCGGCGGCACTA TERM 474 437078 - 437051 - g 77 -12 -3.14195 | opp_overlap 437049 437051 437054, overlap 437049 437047 437046 AAGATGAAAAGGAGA CAGGCCCAAGCT GTCA AGCTCGGGCTTG ATCTTTCCGGCGGCA TERM 475 437051 - 437078 + G 73 -12 -2.60496 | opp_overlap 437051 437049 437047 437046, overlap 437049 437054 AAGATGAAAAGGAGA CAGGCCCAAGCT GTCA AGCTCGGGCTTG ATCTTTCCGGCGGCA TERM 476 437054 - 437075 + G 74 -10.1 -3.45571 | opp_overlap 437051 437049 437047 437046, overlap 437051 437049 ATGAAAAGGAGACAG GCCCAAGCT GTCA AGCTCGGGC TTGATCTTTCCGGCG TERM 477 437799 - 437787 - g 72 -6.9 -4.28049 | opp_overlap 437788, overlap 437788 CGCAAAATCTGAAAA CCGCG CTG CGCAG CGCCTGGTTAAACGT secD 436637 - 438388 + | protein-export membrane protein TERM 478 438715 - 438705 - g 70 -6.8 -4.015 | CGAGGGAGCAAAGAA GGTG GAG CACC TCAGTGTTACGCTCC secF 438385 - 439647 + | protein-export membrane protein TPASS_0412 440028 - 439723 - | hypothetical protein TPASS_0413 441945 - 440047 - | phosphoglucomutase TERM 479 440806 - 440781 - G 72 -10.5 -3.04144 | gap 1 CGTGCACGTCTAAGA GCTGCGCGATAG CTT CTA-CACGCAGC GAGGTGGGACCATTG TERM 480 441725 - 441736 + g 100 -2.2 -5.75945 | GCGATGACAACACGT GGTT TTGG GACC TTTTTTTTCAAGAAT dagA 442048 - 443403 + | D-alanine glycine permease ffh 445222 - 443864 - | signal recognition particle protein TPASS_0415 443384 - 443917 + | hypothetical protein TERM 481 444207 - 444243 + gT 90 -7.4 -4.77165 | opp_overlap 444213, overlap 444208 444213 444232 GTTTGCAGGTGGTCG AGCATATCGC-TGAGCGT GAA ACGCTCGTGCGAT-TGCG TTTTCTTCTGCGCAC TERM 482 444208 - 444242 + gT 78 -10.9 -3.45817 | opp_overlap 444213, overlap 444207 444213 444232 TTTGCAGGTGGTCGA GCATATCGC-TGAGCGT GAA ACGCTCGTGCGAT-TGC GTTTTCTTCTGCGCA TERM 483 444213 - 444238 + gT 78 -10.5 -3.4724 | gap 1, opp_overlap 444213, overlap 444208 444207 444232 AGGTGGTCGAGCATA TCGC-TGAGCGT GAA ACGCTCGTGCGA TTGCGTTTTCTTCTG TERM 484 444409 - 444398 - GT 70 -5.8 -4.15222 | ACCGGTTCCAACAAA CAGC AGTG GCTG ACCGGTAATACTTTT cutE 446894 - 445215 - | apolipoprotein N-acyltransferase TERM 485 445338 - 445314 - G 93 -8.5 -5.00616 | TCCTTCTGCAAAAAA GATGAGCGCGC ACA GCACGATCACC CAATCTCTCATGCGC TERM 486 445435 - 445425 - G 74 -8.2 -3.89435 | opp_overlap 445424 445425 CTGAAACAACGGAAA CGCG GCG CGCG TTTTTCCCTCTGGGC TERM 487 445425 - 445435 + g 88 -8.2 -4.70659 | opp_overlap 445425, overlap 445424 CTGAAACAACGGAAA CGCG GCG CGCG TTTTTCCCTCTGGGC TERM 488 445544 - 445520 - G 77 -7.1 -4.57569 | opp_overlap 445537, overlap 445529 CTATGGCCCGAAAAA GAGAGACAACA TAG TGCTGCCACTC TGCGCTGGCAGTTTT TERM 489 445544 - 445555 + g 74 -5.8 -4.56775 | opp_overlap 445529, overlap 445537 CATAGTGCTGCCACT CTGC GCTG GCAG TTTTTGACCAAGAGT TERM 490 446330 - 446346 + g 82 -2.9 -5.24129 | opp_overlap 446332, overlap 446332 446340 GCCAGAGACGGAACA CAGGGAC GCT GTCTCTC TTTTTTATGAAGAAG TERM 491 446577 - 446548 - G 100 -13.5 -4.16279 | overlap 446540 CACACGAGCGCAAAA GCGCAGGCACGCG CGGG CGCCTGCTTGCGC AGGATGCATGCGAAC TERM 492 446866 - 446849 - G 72 -10.5 -3.12668 | overlap 446841 TCGCAAATGCCAAGA GCACCGC CGAG GCGGCGC TTGAAACAAGAGGCG TERM 493 447123 - 447146 + G 77 -6.7 -4.5442 | overlap 447125 CGCTGTGTGTCTCGC GCCGAAAGG ATAGCA CCTTTCGCC TTTTCTCCTTAACGC TERM 494 447169 - 447189 + G 71 -11.1 -2.93585 | overlap 447166 CTTAACGCTTGGGGA GCGGAGGAA GAT TTCCACCGC TAATTTACGCTATCG TERM 495 447601 - 447624 + G 73 -9.6 -3.5774 | gap 1 TGTTCCCCGTTTCAT CGCGCG-TGAG GAG TTCACCGCGCG TTTGAAGCGTTGCGT TPASS_0418 446921 - 448114 + | galactokinase TPASS_0419 448111 - 448674 + | possible survival protein TPASS_0420 448655 - 448882 + | hypothetical protein TPASS_0421 449016 - 451067 + | hypothetical protein TERM 496 452053 - 452039 - g 70 -7 -4.10007 | opp_overlap 452044, overlap 452029 452028 ACAATGCGCGCAAAA GGGCGC CGC GTGCCC CGCTGTTGGTTCCGG TPASS_0422 451051 - 452076 + | hypothetical protein TERM 497 452188 - 452203 + G 75 -5.4 -4.63527 | gap 1 GCGTGCATAGGTACG CCTGAGC ACC GC-CAGG TTTTTGCGCTGGTAG TERM 498 452595 - 452570 - g 70 -6.1 -4.20516 | gap 1, opp_overlap 452573, overlap 452571 CCTCGAGCGAAGAAA TTGCC-TGCGCG CTG CGCACACGGCAC GTGGAGGGCACGCAC TPASS_0423 452101 - 452907 + | hypothetical protein TERM 499 452981 - 452994 + F 90 -8.1 -4.82667 | AAGTGTGTTATGCTT GTCCC GGTG GGGAC TTTTTAGTATACTCG TPASS_0424 453110 - 453808 + | possible V-type ATPase, subunit E TERM 500 453802 - 453825 + G 70 -6 -4.19817 | gap 1, opp_overlap 453781, overlap 453788 TGTGTCCCGTGCCGG CGCGTGACTCC ACG GGA-TCGCGTG TTTTAGATAGATGGG TPASS_0425 453786 - 454046 + | hypothetical protein TERM 501 455898 - 455879 - g 71 -2.1 -4.99043 | TGTGGAGAAAGAAAA GGAGATA CGTGCC TTTCTCC AGGGAGAATCGACGA atpA1 454188 - 455957 + | V-type ATPase, subunit A TERM 502 456892 - 456902 + G 72 -5.4 -4.52589 | opp_overlap 456892 ACACGGGGTACATTA CTGA GGG TCAG TTTTATCTGAAGAAC atpB1 455961 - 457253 + | V-type ATPase, subunit B TERM 503 457661 - 457685 + G 74 -10 -3.4252 | opp_overlap 457679 AGCTTAGACTTGGAG GCGCATGTTC TCGAC GAACAGGCGC TTCTCCTGGGTGCAG atpD1 457265 - 457885 + | V-type ATPase, subunit D TERM 504 458670 - 458649 - g 71 -10.9 -2.97021 | gap 1, overlap 458651 GCGTGAAACAGGAGA GACGTTGCGC ATT GCGC-ACGTC AGTGGGTACCTGCCT atpI1 457882 - 459750 + | V-type ATPase, subunit I atpK1 459787 - 460209 + | V-type ATPase, subunit K TPASS_0431 460243 - 461064 + | hypothetical protein TPASS_0432 461107 - 461658 + | hypothetical protein TERM 505 463289 - 463246 - g 78 -8.8 -4.23674 | gap 1, overlap 463247 463249 CCGGAGGAACAGAAA GGACGT-GCGCATCCCCAGGT GAT ACCCGAGGGTGCGCCACGTGG ACTGCAACCTGGTGA TERM 506 463288 - 463247 - g 81 -12.3 -3.13722 | gap 1, overlap 463246 463249 CGGAGGAACAGAAAG GACGT-GCGCATCCCCAGGT GAT ACCCGAGGGTGCGCCACGTG GACTGCAACCTGGTG TERM 507 463286 - 463249 - g 93 -14.9 -3.12253 | gap 1, overlap 463247 463246 GAGGAACAGAAAGGA CGT-GCGCATCCCCAGGT GAT ACCCGAGGGTGCGCCACG TGGACTGCAACCTGG arp 461713 - 463527 + | acidic repeat protein tpp17 464094 - 463624 - | lipoprotein, 17 kDa TERM 508 464049 - 464036 - G 76 -8.1 -4.18367 | CACGAGACACACAAA GCGCT ACCG AGCGC TCCAACACCAAGGAA TERM 509 464077 - 464065 - G 78 -10.5 -3.45768 | TCCAACACCAAGGAA CGCGC ACA GCGCG CGGACAGATCCTTTC TPASS_0436 465307 - 464225 - | hypothetical protein TERM 510 464980 - 465001 + gr 95 -15.9 -2.87132 | opp_overlap 464966 AGTCGACCACGATGA CGGCCGTCT GATC AGACGGCCG TATCTGCGCAGAGAG TERM 511 465191 - 465179 - GR 81 -10.5 -3.62096 | CCCCACGACCGCAAA CGCGC GAT GCGCG TCAATGAACTCGATG TERM 512 465268 - 465217 - GR 71 -9.5 -3.56092 | gap 3, overlap 465219 465220 CGATGAGCCCGGAAA GACCCCTCCCCCGATCCCCTGTACGC GCC GCGCAC-GGAGA--GGGGGAGGAAAC GGACTTAGGAAGAGA TERM 513 465266 - 465219 - GR 76 -10.7 -3.35775 | gap 3, overlap 465217 465220 ATGAGCCCGGAAAGA CCCCTCCCCCGATCCCCTGTACGC GCC GCGCAC-GGAGA--GGGGGAGGAA ACGGACTTAGGAAGA TERM 514 465265 - 465220 - GR 73 -12 -2.61144 | gap 3, overlap 465219 465217 TGAGCCCGGAAAGAC CCCTCCCCCGATCCCCTGTACGC GCC GCGCAC-GGAGA--GGGGGAGGA AACGGACTTAGGAAG TPASS_0437 465803 - 465273 - | hypothetical protein TERM 515 465760 - 465745 - GH 70 -5.4 -4.35518 | gap 1, opp_overlap 465745 465747 AATTTCATAGCAAAA CCT-CCG CGG CGGCAGG ATTCTAGCCTAGGTG TPASS_0438 465833 - 466642 + | hypothetical protein TERM 516 466993 - 467013 + G 70 -6.7 -4.10612 | GCTACGCTCGAGTCG GGCGACGAG TAT CTCGGCGGC TTTGTCATTCTCAAT cheW2 466729 - 467241 + | purine-binding chemotaxis protein TPASS_0440 467331 - 468482 + | possible spore coat polysaccharide biosynthesis protein TERM 517 469277 - 469298 + G 74 -5.9 -4.52589 | gap 1, opp_overlap 469256, overlap 469280 CTGCTTGCAAGCAGG TCA-TCGTGC AGC GCACGATTGG TTTTCTGTACACCAC TERM 518 469280 - 469294 + G 79 -10 -3.79162 | opp_overlap 469256, overlap 469277 CTTGCAAGCAGGTCA TCGTGC AGC GCACGA TTGGTTTTCTGTACA TPASS_0441 468479 - 469396 + | hypothetical protein recN 469389 - 471110 + | DNA repair protein TPASS_0443 471052 - 471906 + | hypothetical protein TPASS_0444 471912 - 472940 + | hypothetical protein TERM 519 473254 - 473298 + G 72 -7.8 -3.9461 | overlap 473247 473255 473284 GTCTTGAGGCGCTTT GTGCTTCTCCGG-GCATCGCGG ATG CCGCG-TGCGCCGCAGATGCGG TTCTTCTTCCCGGGG TERM 520 473255 - 473297 + G 75 -11.3 -2.96444 | overlap 473247 473254 473284 TCTTGAGGCGCTTTG TGCTTCTCCGG-GCATCGCGG ATG CCGCG-TGCGCCGCAGATGCG GTTCTTCTTCCCGGG TERM 521 473327 - 473359 + G 70 -4.8 -4.4648 | gap 1, overlap 473330 473332 GGGGTTGGAAAACTG TCATACGCTTGCCGC CTGT GCGGC-GGTGCGTGA TTTTGTCATGCGCGT TERM 522 473590 - 473627 + G 74 -2.7 -4.88405 | gap 1, overlap 473586 473591 473614 473615 TGGTACGTGATGGAA ATCTTTTGACCGCGTGTG CGG CAGGTGCGG-CAGAAGAG TTTTCTTTCGCAGTT thiJ 473076 - 473705 + | 4-methyl-5(b-hydroxyethyl)-thiazole monophosphate biosynthesis enzyme TERM 523 474015 - 474047 + G 71 -3.4 -4.86033 | gap 1 GGTGTGACGTTGTGC GTTTTGCCG-TTCCT GACA GGGAATCGGCTGAGC TTTTTGTGGCGCTTT gcpE 473747 - 474961 + | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase TERM 524 475359 - 475379 + G 91 -11.9 -4.07568 | opp_overlap 475352 475351, overlap 475375 475378 TTCCAAACTGCTCCA GTGGCTGAA GGA TTCAGCCGC TTTTCCAGAAGCGGA TPASS_0447 474958 - 476082 + | hypothetical protein TERM 525 476244 - 476258 + G 78 -8.6 -4.18164 | ATTGGACGAGTTGTA CTCATC TGC GATGAG TTCTTTTGCGCAGTT TPASS_0448 476140 - 477222 + | possible uracil phosphoribosyltransferase TERM 526 477638 - 477618 - g 76 -4.1 -4.91109 | GCGTGATCAGAAAAA TACTCAA CGTATTC TTGAGTA TGCAAACGTATTGAT TPASS_0449 477226 - 477816 + | hypothetical protein TERM 527 477837 - 477853 + F 70 -5.1 -4.43272 | overlap 477829 CACTGAATGCGCGTG CGGTGTA GCG TGCACTG TTTTACGTTTTAGGT fusA1 477953 - 480004 + | translation elongation factor G TPASS_0451 480175 - 479993 - | hypothetical protein TERM 528 481837 - 481862 + G 72 -6.8 -4.28548 | overlap 481859 GCATCCATTTGCTGG CAGCCATCGC ACATAC GTGATGGCCG TTTTGGTAAGTGGCT TERM 529 482172 - 482192 + G 72 -4.7 -4.60797 | ACATGCAACTGACTT TGAGCGG TATTTCC CTGCTCA TTTTATCTCTGAAGG TERM 530 482389 - 482403 + G 72 -5.6 -4.52897 | GATCGCTACGGTGCT GACGCG CTC CGCCTC TTTCTTGTTCGTTCT TERM 531 482480 - 482510 + G 93 -8.4 -4.75174 | opp_overlap 482480 AAGATATTTTGAAGA CTGTGATTATCCCA TTG TGGAATAGTTACAG TTTTTACGTTACGTA ileS 480454 - 483729 + | isoleucyl-tRNA synthetase TPASS_0453 483716 - 484579 + | hypothetical protein TERM 532 484830 - 484774 - T 77 -8 -4.13728 | gap 1, overlap 484813 484814 484822 TAGAGACTTCGAAAA GGGCTGTCCTTCCTGTGGGTATGCGTT CGGG AACG-AGAACCGGAGAAAGGGCAGCCC CCCGGCACCGAAGGG TERM 533 484876 - 484822 - T 80 -10 -3.9398 | gap 3, overlap 484774 484813 484814 CGAGAACCGGAGAAA GGGC-A-GCC-CCCCGGCACCGAAGGG AGCC CCCCGCCGTGCCGAAGAGGCCTTGCCC ACCTGGGTCTACGCA TPASS_0454 485618 - 484929 - | hypothetical protein TERM 534 485545 - 485559 + g 74 -7.8 -4.13767 | opp_overlap 485545, overlap 485517 TGGATCACCTCATAA CCGCAC TGC GTGTGG TTTTCAAATACCAGA TPASS_0455 486619 - 485615 - | hypothetical protein TERM 535 486075 - 486053 - G 71 -10.5 -2.91593 | overlap 486052 CACGGGGGGAGAAAC CGGCAACGC GCCGA GCGCCGCCG CAGCAGGGGCAGGCT TERM 536 486313 - 486332 + g 76 -9.2 -3.75292 | TGCGTATCCATTCGT CCGTGTGC GCAA GCGCGCGG TTCTTCATCGTCCGT TPASS_0456 487992 - 486676 - | hypothetical protein TERM 537 486949 - 486921 - G 75 -5.1 -4.72272 | GCGGTGGATGAAAAA TGAGCGCGTTCGC GTG GTGTGCACGCTCA TCAGCAGTGCGGTGG TERM 538 487576 - 487540 - G 70 -6.3 -4.25104 | opp_overlap 487527 TGGCTCTGAGTAAAA GCCCTCAGCGCTCTGTG TGG CTAAGAGTGCGGGGGGC GTCAGAGTGAGCGAT TERM 539 489269 - 489286 + G 74 -2.5 -5.09426 | overlap 489269 489268 TTTAACGCGGCGCAT GAGCGCG CACG CGCACCC TTTTTTGGCATTGAC TPASS_0457 488060 - 489841 + | hypothetical protein TPASS_0458 489932 - 490510 + | hypothetical protein TPASS_0459 490539 - 491324 + | hypothetical protein TPASS_0460 491367 - 492074 + | hypothetical protein TPASS_0461 492075 - 492434 + | hypothetical protein TERM 540 492427 - 492458 + F 74 -2.8 -4.91852 | CCCCCCCCCGGTGGC GCGGATAGCGGCCT CGGG GGGCTGCAGTGTGC TTTGTTTTTGGTAGG TPASS_0462 492639 - 493481 + | hypothetical protein TPASS_0463 493486 - 493818 + | hypothetical protein TPASS_0464 494629 - 493877 - | hypothetical protein TERM 541 494473 - 494442 - G 74 -7.9 -4.11216 | gap 1, opp_overlap 494468, overlap 494443 494445 TGCGGAGCGGGAAAA GCACCGGCAGGCGC AGAAG GTGCC-GCCGGTGA ACAGAATACGGCAGC TERM 542 494472 - 494443 - G 75 -11.4 -3.06515 | gap 1, opp_overlap 494468, overlap 494442 494445 GCGGAGCGGGAAAAG CACCGGCAGGCGC AGAAG GTGCC-GCCGGTG AACAGAATACGGCAG TPASS_0465 495498 - 494626 - | hypothetical protein TERM 543 494701 - 494689 - GR 75 -6.9 -4.41616 | AGGTTGTGAAATAAA GCGCC AGG AGCGC TGAAAGTCCTCAACC TERM 544 495412 - 495393 - GR 73 -6.4 -4.41114 | overlap 495403 GCACCACACAAGAAA CCAGTACA AACG CGCACTGG CGAGCGAGAACCATG TPASS_0466 496600 - 495431 - | hypothetical protein TERM 545 496072 - 496055 - GH 71 -4.2 -4.66609 | opp_overlap 496064 CAGGGTATCCAAAAA CTTTTC GCCGAG GAAAAG AAGCGTATTTTTCTC TERM 546 496450 - 496423 - GH 79 -7.7 -4.39568 | overlap 496417 496425 496448 ATCCAGAGAGCAAAA GACCTTGCACC GTTTTA GGTGCAAAGGC ATCGAGTGCGATACC TERM 547 496448 - 496425 - GH 73 -8.9 -3.79993 | overlap 496417 496423 CCAGAGAGCAAAAGA CCTTGCACC GTTTTA GGTGCAAAG GCATCGAGTGCGATA TPASS_0467 496591 - 496839 + | hypothetical protein TPASS_0468 498761 - 496809 - | hypothetical protein TERM 548 498369 - 498393 + g 74 -7.8 -4.10925 | gap 1, opp_overlap 498348 498362 498349 498383, overlap 498349 498381 498383 GCGAGACACTCCCCG GGGCG-GGGTG AGAA CACGCGCGCCC TTTTGCCGCGTGTCT TPASS_0470 499695 - 498754 - | hypothetical protein TPASS_0471 499687 - 501096 + | hypothetical protein uvrC 503184 - 501109 - | excinuclease ABC, subunit C TERM 549 502284 - 502315 + g 81 -4.6 -5.14965 | gap 1, opp_overlap 502284, overlap 502290 GGTCAGAGTAGTAAG TGATGA-GAAATTCT GAA AGGATTTCCTCTTCA TTTTTTAATGAACGT TERM 550 502444 - 502457 + g 75 -5.3 -4.62984 | TGCACGTTCGTCCAT GTCTT GAAC AAGAC TTTTGTGTGTAATAC TPASS_0473 503903 - 503259 - | hypothetical protein TERM 551 503586 - 503571 - G 86 -3.9 -5.38054 | overlap 503572 GTGCACAAAGAAAAA CGACG TATACG CGCCG AAGAGCGCAGACACG TPASS_0474 504705 - 503968 - | hypothetical protein TERM 552 504372 - 504385 + g 93 -5.9 -5.20333 | overlap 504373 ACAAATTGCGCACGT TCGCG GCCG CGCGG TTTTTGTTATCGGTG gpi 506453 - 504846 - | glucose-6-phosphate isomerase TERM 553 505842 - 505829 - G 88 -2.3 -5.52079 | ATACCAAAATAAAAA GCGTG GTCT CAAGC GGTAGTTTTGAGAGT TERM 554 506157 - 506180 + g 81 -6.7 -4.59511 | overlap 506145 CTGCACGCCGAGGCG CGTTAGGTG ATGCAG CACCTTACG TTTTTCCCCCGTGTT ack 507863 - 506517 - | acetate kinase TERM 555 507326 - 507316 - G 71 -2.4 -5.02323 | GCAGTATAAAGAAAA CTCG TGC CGTG AAAGCCGTAGCGACG TERM 556 507651 - 507632 - G 72 -10 -3.29144 | overlap 507616 TCATGTCGCTGATAA CACCGACG TGCG CATCGGTG AGGGTGCTGATGATA TPASS_0477 508655 - 507930 - | possible glucose-6-phosphate 1-dehydrogenase TERM 557 508306 - 508264 - G 72 -9.9 -3.29273 | gap 1, opp_overlap 508264 508269, overlap 508269 CCCAGGAGTATAATA TCAAAGCACGGCACGCCACG CTGT CTTGG-GAGCCGTGCTTCAA TTTCCTGTGAGTATG TERM 558 508269 - 508301 + g 72 -9.8 -3.32159 | gap 1, opp_overlap 508264 508269, overlap 508264 GAGTATAATATCAAA GCACGGCACGCCACG CTGT CTTGG-GAGCCGTGC TTCAATTTCCTGTGA TERM 559 508301 - 508269 - G 81 -9.8 -3.98159 | gap 1, opp_overlap 508269 508264, overlap 508264 GAGTATAATATCAAA GCACGGCACGCCACG CTGT CTTGG-GAGCCGTGC TTCAATTTCCTGTGA TERM 560 508352 - 508377 + g 90 -10.4 -4.41348 | overlap 508353 CCGGGGCGTCTTCTC CCCTGACGCG AAACAC CGCGTCAGGA TTTATTTCCAGAGGC TERM 561 508353 - 508376 + g 89 -13.9 -3.24488 | overlap 508352 CGGGGCGTCTTCTCC CCTGACGCG AAACAC CGCGTCAGG ATTTATTTCCAGAGG zwf 510263 - 508716 - | glucose-6-phosphate 1-dehydrogenase TERM 562 510102 - 510085 - G 74 -7.7 -4.07687 | overlap 510098 AGCCGTGCGCGAAAA GACTCTG TAGA CAGAGCC GTACGCCCTGCGCCG TPASS_0479 511010 - 510336 - | hypothetical protein TPASS_0480 511122 - 511610 + | hypothetical protein TERM 563 512396 - 512380 - gf 85 -6.5 -4.91573 | opp_overlap 512379 512381, overlap 512382 AAAATACAGGAAAAA GCGGC GGAGCTG GCCGC CCCCGTGTCTTTTGG TERM 564 512397 - 512418 + GF 73 -5.7 -4.4009 | overlap 512379 512381 512410 512411 GGCGGAGCTGGCCGC CCCCGTGTC TTTT GGCGCAGGG TTTTCTGCGCTCAAA TERM 565 512411 - 512451 + GF 70 -11.2 -2.70298 | opp_overlap 512434, overlap 512397 512410 CCCCCGTGTCTTTTG GCGCAGGGTTTTCT-GCGCT CAA AGCGCAAGTGGACCC-GCGC ATTCTCCTTGAACGC TERM 566 512517 - 512486 - gf 77 -5.8 -4.59853 | gap 1, overlap 512488 512505 TGAAGGCGTTAAAAA CT-CCCACCCTCGTA CAG CACGTGGGTGCGCAG GCGCCCAAACTTGCA TERM 567 512689 - 512650 - gf 75 -5.6 -4.63218 | overlap 512653 512654 512655 512657 GTGTCGGCAATAAAA CAAGGTATCGAGACGCTC GATA GAGCGCGCCGATCCACTG AGGAAGCCCTCGCTA TERM 568 512685 - 512653 - gf 75 -7 -4.43307 | gap 1, overlap 512650 512654 512655 512657 TCGGCAATAAAACAA GGTATCGAGACGCTC GATA GAGCGCGCCGAT-CC ACTGAGGAAGCCCTC TPASS_0481 511642 - 513075 + | hypothetical protein TPASS_0482 513042 - 513890 + | hypothetical protein TPASS_0483 515080 - 513956 - | hypothetical protein/fibronectin-binding protein TERM 569 514323 - 514307 - G 80 -5.1 -5.00616 | GTTGCGCTTAAAAAA GCACATC TCA AACGTGC CGACAAACCCGATAG TPASS_0484 517082 - 515067 - | hypothetical protein TERM 570 515698 - 515721 + gr 81 -9 -4.11216 | gap 1 GCTTCTGGTATTGGC TCGCA-GGTAA AGA TTACCATGCGA TTTTCCCGATCCGCG TERM 571 516131 - 516108 - GR 71 -4.4 -4.55287 | opp_overlap 516114 516115, overlap 516109 GCGACGCACAGAAAA GGAACGGGGC GCTG ACGCCGTGCC GTTCTGCGGGACCAG TERM 572 516786 - 516800 + gr 88 -11.4 -3.84451 | CACGTCCCGATGGTA GACGGG CAC CCCGTC TTTGAGTTTGAGCCA TPASS_0485 518820 - 516976 - | adenylate cyclase TPASS_0486 520412 - 518817 - | antigen, p83/100 TERM 573 519398 - 519409 + g 74 -5.8 -4.52047 | CCAACCGCTCCCGTT GTGC TTCT GCAC TTTTCTGCTGTGCTC TERM 574 520202 - 520190 - G 81 -10.5 -3.62046 | CTACTGCGTGAATAA GCGCG TAA CGCGC ACGATCCCCCGCAAC TPASS_0487 522078 - 520501 - | hypothetical protein TERM 575 521754 - 521766 + g 100 -4.7 -5.93809 | overlap 521755 GTACGGACCCTGATG CGCGC AGG GCGCC TTTTTTTTCTCCAAA TERM 576 521755 - 521765 + g 78 -8.2 -4.15201 | overlap 521754 TACGGACCCTGATGC GCGC AGG GCGC CTTTTTTTTCTCCAA TERM 577 522549 - 522573 + G 70 -4.2 -4.62069 | gap 2, overlap 522552 ATGTGCCTGCGCGGA GCCCACGCGCCC TGT GGG-GCG-GAGC TTTTTCCCGTAAAAC mcp2 522306 - 524843 + | methyl-accepting chemotaxis protein TERM 578 524871 - 524882 + F 74 -2.2 -5.1356 | ACGTGCTCTGCTGTT CTGC GCGT GTAG TTTTTCTTAGTGCAG TPASS_0489 525291 - 526259 + | hypothetical protein TERM 579 526347 - 526359 + G 72 -10.5 -3.1162 | opp_overlap 526340, overlap 526352 526354 GGCAGACATTGGCGC CGGCG CTG CGCCG TCTTGCGCTGTTTGT TPASS_0490 526256 - 526444 + | hypothetical protein TERM 580 526659 - 526693 + G 78 -10.6 -3.42503 | opp_overlap 526656 526660, overlap 526660 TTCACGAACTGAGGA ACGCACGGCTCATTCG ATC CGAGTGGGCTGCGCGG TTGTACGTGTTCGCG TERM 581 526692 - 526660 - g 70 -9.7 -3.22884 | opp_overlap 526660 526659, overlap 526656 TCACGAACTGAGGAA CGCACGGCTCATTCG ATC CGAGTGGGCTGCGCG GTTGTACGTGTTCGC TERM 582 526660 - 526692 + G 84 -14.1 -2.6518 | opp_overlap 526656 526660, overlap 526659 TCACGAACTGAGGAA CGCACGGCTCATTCG ATC CGAGTGGGCTGCGCG GTTGTACGTGTTCGC TERM 583 526759 - 526769 + G 72 -6.8 -4.24948 | opp_overlap 526758, overlap 526758 TTCTCCTGCAATGAG TGCG GTG CGCA TTTTAACTATGCTCG TERM 584 526946 - 526959 + G 72 -4.5 -4.62984 | opp_overlap 526939, overlap 526944 526946 526955 TATAAGATCCCTGCT CCTTC AGTG GAGGG TTTTCTCTATCCTGA TERM 585 527155 - 527165 + G 82 -3.2 -5.24129 | TTCTGAGGCAGCACG CATC GCA GGTG TTTTTTATAACCGGA TERM 586 527249 - 527263 + G 70 -7 -4.08557 | opp_overlap 527242 527249 GAAATTGAGGGGAAA GCGCAC CCC GAGCGC TTGTTCTTTAAAGAC TPASS_0491 526451 - 527485 + | hypothetical protein TERM 587 528095 - 528083 - g 100 -4.8 -5.75342 | opp_overlap 528083 528084, overlap 528084 TGTTTGCAAAAAAAA GCGA GCGTA TCGC CGTTTTTTCAGATCG TERM 588 528084 - 528097 + G 81 -4.5 -5.0538 | gap 1, opp_overlap 528083 528084, overlap 528083 GTTTGCAAAAAAAAG CGAGCG TAT CGC-CG TTTTTTCAGATCGGA TERM 589 528348 - 528363 + G 70 -10.4 -3.14132 | overlap 528327 GTTGACGTATGCTGT TGCGCC TTTA GGCGCA TTGCTGACGAAAAGC dnaG 527509 - 529326 + | DNA primase TERM 590 529635 - 529621 - g 73 -11.4 -2.62263 | AGCTGTGCGACAGTA GCCGTG GGG CACGGC AGAACTTGCTGTCAA rpoD 529323 - 531158 + | RNA polymerase sigma-70 factor TPASS_0494 531168 - 531989 + | hypothetical protein TPASS_0496 532319 - 533308 + | hypothetical protein mreB 533321 - 534355 + | rod shape-determining protein mreC 534360 - 535223 + | rod shape-determining protein mreD 535220 - 535726 + | rod shape-determining protein TERM 591 535891 - 535871 - g 100 -3.2 -6.06723 | overlap 535872 TCGTTCAAAAAAAAA TCGCTGAA CATAT CTCAGCGT AGTAAAGTAATTCCT TERM 592 535890 - 535872 - g 72 -6.7 -4.22949 | overlap 535871 CGTTCAAAAAAAAAT CGCTGAA CATAT CTCAGCG TAGTAAAGTAATTCC pbp1 535727 - 537601 + | penicillin-binding protein TERM 593 538070 - 538096 + G 74 -2.3 -5.02439 | gap 1 TGTCTCAGCCGGATC TCGGCA-CTGCA TCCG TGTACCTGCCGA TTTTTCTCGTTATGT rodA 537598 - 538899 + | rod shape-determining protein TERM 594 539122 - 539133 + G 82 -2.2 -5.40279 | gap 1, overlap 539103 539102 CGCGCATGAGCCCAT GCGCG ATC CG-GC TTTTATTTTCTTTTC TERM 595 539268 - 539290 + G 76 -9.2 -3.85698 | AGACGTTTGAGGATT TCTTTCGTGT CGA GCACGAGAGA TTTGTAAGGCAGAAA TERM 596 539323 - 539311 - g 90 -9.1 -4.55383 | opp_overlap 539320 AAGGCAGAAAAAGAA GCGTG TCG CACGC ACTGCGCTGTTAGAG TPASS_0502 538925 - 539821 + | hypothetical protein TERM 597 540155 - 540182 + G 74 -9.8 -3.53811 | TATTGCAGCAGAGCT CGGACGCCCTGC CAAA GAAGGGTGTTCG TTTGCGGCACCTACG TPASS_0503 539800 - 540363 + | hypothetical protein TPASS_0504 540345 - 540485 + | hypothetical protein hxk 541828 - 540494 - | hexokinase TERM 598 540780 - 540770 - G 75 -5.4 -4.7261 | ATCGAGCAAAAGAAA GAGA ATC TCTC GGTCTGTGTCGGTGC TERM 599 542877 - 542888 + G 70 -4.4 -4.49352 | overlap 542884 AAAGCCAGTGTTCGA TCCT GACG AGGA TTTCTCTTTTGCTGT TERM 600 543562 - 543579 + G 71 -2.6 -5.02074 | opp_overlap 543573 543574, overlap 543564 AGCCTGTCGGGCACC CCGCAG AATAAG CTGCAG TTTTTTCAGCAGTGG tig 542563 - 543891 + | trigger factor TERM 601 544031 - 544043 + G 73 -4.1 -4.8667 | GTGGCGGATTTAGTT GTAGC GCA GTTAC TTTTTCTAGAGTCTC clpP1 543884 - 544495 + | ATP-dependent Clp protease proteolytic component clpX 544482 - 545729 + | ATP-dependent Clp protease subunit X ahpC 545826 - 546392 + | alkyl hydroperoxide reductase TERM 602 546392 - 546431 + T 100 -7.7 -5.36364 | gap 1, overlap 546395 546396 AATCGGTAAGATTTA GTGC-GGCCCGGAGGGCG CGCGT CGCCCTCCCCGCCTGTTC TTTTTCTGTTTTTGC TERM 603 546395 - 546428 + T 100 -10.2 -4.69512 | gap 1, overlap 546392 546396 CGGTAAGATTTAGTG C-GGCCCGGAGGGCG CGCGT CGCCCTCCCCGCCTG TTCTTTTTCTGTTTT TERM 604 546396 - 546426 + T 93 -13.9 -3.90582 | overlap 546395 546392 GGTAAGATTTAGTGC GGCCCGGAGGGCG CGCGT CGCCCTCCCCGCC TGTTCTTTTTCTGTT lepA 548390 - 546573 - | GTP-binding membrane protein carD 548433 - 549059 + | transcription factor TERM 605 550196 - 550208 + G 91 -7.7 -5.06414 | CAGGCCCTGGACACG CACGT AAC ACGTG TTTTTGTTAAGGCAA TPASS_0512 549056 - 550303 + | hypothetical protein TERM 606 551143 - 551133 - g 74 -3.2 -4.9218 | GATGTAGCAGAAAAA TGCA AGC CGCA CTTTTTCAGTAGTGC trkA 550377 - 551777 + | K+ transport protein TERM 607 552180 - 552168 - g 79 -4.1 -5.1675 | overlap 552169 CCATCGAGCAAAAAA CTACG CAG CGTAA CCCTCGCTCAACGGT TERM 608 552524 - 552493 - g 100 -7.4 -5.68023 | opp_overlap 552496 552498, overlap 552496 GGATAAGCAAAAAAA GCATTCTATCGATA TAGT TGTCGATAGAATTC AATTGTCAGATACAG TERM 609 552496 - 552521 + G 70 -9.9 -3.2375 | opp_overlap 552493 552496, overlap 552498 TAAGCAAAAAAAGCA TTCTATCGATA TAGT TGTCGATAGAA TTCAATTGTCAGATA TERM 610 552705 - 552694 - g 86 -3.6 -5.40072 | TTTTTCGCAAAAAAA CGCG TGCG CGCA CTGTAATGTCTCCGT TERM 611 553250 - 553225 - g 100 -2.5 -6.53504 | gap 1, opp_overlap 553229 553230, overlap 553227 553228 TATAGAAAAAAAAAA CATCCA-CGCAC TCA GTGCGCTGTCTG TAGATGATTCGTGTG TERM 612 553247 - 553227 - g 74 -3.1 -4.88107 | opp_overlap 553229 553230, overlap 553225 553228 TAGAAAAAAAAAACA TCCACGCAC TCA GTGCGCTGT CTGTAGATGATTCGT uvrA 551891 - 554773 + | excinuclease ABC, subunit A TERM 613 556136 - 556119 - g 100 -2 -5.90981 | gap 1, opp_overlap 556120, overlap 556121 TGATAGTAAAAAAAA CAGCTCT TCTCC AGAGC-G TAACTTCTTCTACCC TERM 614 556135 - 556121 - g 75 -5.7 -4.59226 | opp_overlap 556120, overlap 556119 ATAGTAAAAAAAACA GCTCT TCTCC AGAGC GTAACTTCTTCTACC TERM 615 557437 - 557412 - g 70 -4.1 -4.72986 | CACTGTGATTAAAAA TGAGAAACTAA CGCC TTACTTTCCCA CCCAGTTATCGAAAT TPASS_0515 554770 - 557745 + | hypothetical protein mviN 559339 - 557759 - | virulence factor TERM 616 558066 - 558055 - G 93 -2.2 -5.65177 | ACATCCATAAAAAAA CGGT CTGT ACCA TACTCGCCGCGCTCA ruvC 559926 - 559336 - | Holliday junction nuclease, subunit C TERM 617 559535 - 559551 + g 83 -5.2 -5.16237 | CTTTTTTCTGCTTGG GCAATA CCAGT TATTGC TTTTTTAATCGCATT TPASS_0518 560600 - 559908 - | hypothetical protein atoC 561973 - 560597 - | response regulatory protein TERM 618 562552 - 562572 + r 74 -3.2 -4.85195 | overlap 562554 GAGCCGTTCGATTTC CTCCTCTA CCACA TGGAGGTG TTTTTGGATTCTTTT TERM 619 562983 - 562998 + r 71 -6 -4.36903 | opp_overlap 562982, overlap 562980 TGGTTTACCCAAGAG CCGTGC AATT GCTCGG TTTGTCTTTAATGGA TPASS_0521 564439 - 563168 - | possible DNA polymerase III, gamma and tau subunits TERM 620 563479 - 563424 - G 79 -12.8 -3.1085 | TCAAGTGAGGTAAGA TCCATTCCTGATACTTGAGGTTGAGT ACCT ACCGAAACCCAAGTATCAGGAATGAT GCGTCCGATACACCT TERM 621 563588 - 563600 + g 79 -4.1 -5.09895 | opp_overlap 563579 TAAATAGTGCAAGAG TACAC CCT GTGTG TTTTTTGCATCGGTC TERM 622 564466 - 564445 - R 73 -5.8 -4.4261 | overlap 564446 TCTCGAACACGAAAA CGCGCCTA CATCTT CAGGCGCA TATAGCGAACGCCAT TPASS_0522 564929 - 564450 - | hypothetical protein murG 566080 - 564926 - | UDP-N-glucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase TERM 623 565315 - 565298 - G 74 -7.7 -4.14598 | CTGAATGAAAGGAAA CGACATG TAGG CATGCCG AGCATTGACGCTAAG TERM 624 565553 - 565539 - G 100 -2.8 -5.93809 | TGTGCAGAAAAAAAA TCTTGT CGC ACAGGA TTCCCCGTGCAGTGA lon2 568729 - 566084 - | ATP-dependent protease LA TERM 625 566429 - 566441 + g 73 -9.1 -3.66178 | CATGGTAATCCCCGC GGACG GAC CGTCC TTTGGGGTTGCGCCC TERM 626 566824 - 566835 + g 79 -2.2 -5.24129 | overlap 566803 CAAGCTTGCGATGCA GCTT GTCA AGGC TTTTTTCTAGCCCCC TERM 627 567828 - 567843 + g 79 -4.8 -5.01546 | TTCTCCACCCGACTG TTCAAA TCAT TTTGAA TTTTTCTCTGGATTT TERM 628 568810 - 568794 - H 82 -5.2 -5.00884 | overlap 568798 AGGCCTTTTAAAAAA TATACC TGCGC GGTATA CTGCGCCCCCGCAGG efp 568865 - 569428 + | translation elongation factor P TERM 629 570732 - 570744 + G 74 -2.7 -5.02323 | TCGGTATCCACGATT TCGAA CAC TTTGA TTTTATTTCTCCTCC TERM 630 571498 - 571460 - g 100 -14.4 -3.28712 | opp_overlap 571453, overlap 571483 CCCGCTTTGCTAGAA CGTAGGGGCCGCGCTGAG AAG CACGGCACGTCCCCCACG CGCGCAGCTTTCCTG hrpA 569576 - 571582 + | ATP-dependent helicase atpD2 572259 - 571630 - | V-type ATPase, subunit D TERM 631 571771 - 571784 + g 74 -2.4 -5.06735 | CTTGCTCAGCGCATT CACA CGTCGC TGTG TTTTTCTCATTTCTG atpB2 573796 - 572354 - | V-type ATPase, subunit B atpA2 575610 - 573793 - | V-type ATPase, subunit A TERM 632 574094 - 574076 - G 76 -7.4 -4.25104 | TCCGTCGGATCAAAA GCGTTCTG CTG CAGAAAGC CACCTTTGATCATTT TERM 633 575320 - 575297 - G 73 -11.8 -2.81316 | gap 1, overlap 575293 575296 575316 CCAGGACGCAAGAAG GCGCCGTCTTC TTG GAAGA-GGCGC TCAAGTGGGCGCTGA TPASS_0530 576233 - 575607 - | possible V-type ATPase, subunit E TPASS_0531 576577 - 576239 - | possible V-type ATPase, subunit F atpI2 578561 - 577197 - | V-type ATPase, subunit I TERM 634 577385 - 577375 - G 88 -2.4 -5.53991 | opp_overlap 577377, overlap 577377 CATGTACCAAAAAAA GAGG AGT CCGC ACACTCCCGTTTTTG TPASS_0534 579579 - 578554 - | hypothetical protein TERM 635 578686 - 578671 - G 100 -9 -5.31275 | CTTCATCATAAAAAA TGCGAC GATC GTCGCA GGAGTAAAGAGCTGC TERM 636 578821 - 578809 - G 73 -9.1 -3.69663 | AGGATTATTTAAGAA GCGCT CAT AGCGC CATCCACTCCACGCC TERM 637 578937 - 578925 - G 86 -9.1 -4.31433 | opp_overlap 578925 578924 578922 578918 CACCGTTAGAAGAAA GCTCC GAA GGAGC GTCTTTCTTCTGTAC TERM 638 579615 - 579595 - R 84 -6.1 -5.11613 | overlap 579606 ACACTACCCAAAAAA GAAACCATC AAG GAAGGCTTC GAAGCGCTCCACGTC TPASS_0535 579795 - 579583 - | hypothetical protein TPASS_0536 580337 - 579936 - | hypothetical protein tpi 581236 - 580487 - | triosephosphate isomerase TERM 639 580540 - 580515 - G 71 -3.1 -4.75472 | overlap 580517 GCGATAGGAACAAAA GACGCAGCCTC CAGC GAAGCACCGCC AATGAGTCCCCCGTC pgk 582646 - 581387 - | phosphoglycerate kinase TERM 640 582358 - 582371 + gH 70 -9.5 -3.41936 | overlap 582356 582369 CAAGGCAGTCCGCAA CCGGC TTAA GCCGG TGTTTGCCGTTAATG TPASS_0539 582618 - 582839 + | hypothetical protein spoIIAA2 583120 - 583491 + | anti-sigma F factor antagonist TERM 641 583559 - 583594 + F 77 -8.3 -4.16182 | gap 1, overlap 583561 CCACAGCTTTTTGCT GCCGCGTGCCGCTGCA CGGAC TGCAGTGGTA-GCGTC TTTCCTTTATACTCA TERM 642 583561 - 583592 + F 74 -9.5 -3.67003 | gap 1, overlap 583559 ACAGCTTTTTGCTGC CGCGTGCCGCTGCA CGGAC TGCAGTGGTA-GCG TCTTTCCTTTATACT era 583621 - 584580 + | GTP-binding protein TPASS_0542 586298 - 584577 - | pyrophosphate--fructose 6-phosphate 1-phosphotransferase, beta subunit ruvA 587041 - 586358 - | Holliday junction DNA helicase, subunit A TERM 643 586876 - 586862 - G 70 -5.6 -4.32649 | opp_overlap 586864, overlap 586865 ATTCGAAAAACCAAA GAGGCG AAG CGCATC TTCACGGTGATACAA TPASS_0544 588957 - 587083 - | hypothetical protein TERM 644 587406 - 587390 - G 81 -7.2 -4.71828 | opp_overlap 587389, overlap 587392 AGTGCAGCAACAAAA GCGGCA ACCTG CGCCGC CTGCTGTATACGCTT mglB1 590046 - 588982 - | methylgalactoside ABC transporter, periplasmic galactose-binding protein TERM 645 590152 - 590140 - R 76 -3.4 -5.06735 | overlap 590143 TAGAAATTAGAAAAA GGAT GGATT ATCC AGTGCTGCCACCAAT TPASS_0546 592131 - 590131 - | possible periplasmic serine protease lytB 592973 - 591843 - | penicillin tolerance protein TERM 646 592014 - 591991 - G 76 -11 -3.36648 | gap 1, overlap 591981 591995 GAAGACACCCGAGAA GCG-ACAGGCG CGC CGCCCGTGCGC AGCGCCTGCTCCACA TERM 647 592022 - 591995 - G 76 -12.6 -2.60257 | overlap 591981 591991 ACACCCGAGAAGCGA CAGGCGCGCCGC CCGT GCGCAGCGCCTG CTCCACAGCAGCGAT TERM 648 593383 - 593401 + G 72 -7.4 -3.90744 | opp_overlap 593395 GGTGAGCTTTACAGC GCTGGC AGATGAC GCCAGC TTCTTTGAAGCCAAC TERM 649 593916 - 593890 - g 73 -3.6 -4.85782 | opp_overlap 593915 CTCGGTAAAAACAAA GGATAGCGACGT CAA ACACCTCAATCC GGCCATTGCCGTCGG TPASS_0548 593117 - 594433 + | hypothetical protein TERM 650 595162 - 595139 - g 72 -4.4 -4.69962 | GAGAGGAAAAAATAA CCCGGTGCTC ATCG GAGAGCCAGG TGTCGGGAAAACTTC TERM 651 595754 - 595775 + G 70 -5.9 -4.18762 | gap 1, opp_overlap 595749 GGTACAACAGCGCGC GGATACGCAG GTA TTGCGT-TCC TTTTCCATAAAAGTT TERM 652 596340 - 596350 + G 71 -2.4 -5.01497 | CTTACCGAGCGCGTA CGGC ACC GCCC TTTTTCTGTCATCCT clpC 594531 - 596975 + | ATP-dependent Clp protease, subunit C thdF 598503 - 597016 - | thiophene and furan oxidation protein TERM 653 597552 - 597539 - G 71 -3.1 -4.87803 | gap 1, overlap 597540 CAGTCCGAAAGAAAA GC-GCA ATC TGCAGC CTGCACACCTGCACG TERM 654 597844 - 597888 + g 76 -10.6 -3.29461 | gap 1, overlap 597846 GCGCACTCCCGTTCG CTGCAGCGCACGCTCC-TGCC AGCA GGCACGGAGCCTGCGCAGACG TTCTACCAACGGTTC TERM 655 597846 - 597887 + g 73 -11.6 -2.57463 | gap 2, overlap 597844 GCACTCCCGTTCGCT G-CAGCGCACGCTCC-TGCC AGCA GGCACGGAGCCTGCGCAGAC GTTCTACCAACGGTT TPASS_0551 599595 - 598507 - | phosphatase TERM 656 599292 - 599279 - G 70 -3.8 -4.69415 | overlap 599269 AGCAACACAAACAAA GCAC TCGCCT GTGC ATGCCCGGAGGGTGT TERM 657 599343 - 599315 - G 75 -4.6 -4.83615 | gap 1 GAGGGTGTAGAAAAA CCATC-GTGGAAC ACAA GTTTCACCGACGG GTCACGCACAAAGGG TPASS_0552 600141 - 599608 - | hypothetical protein TERM 658 599721 - 599706 - G 81 -6 -4.82901 | overlap 599707 GCTCCTGCACAAAAA TGGCGC TGTA GCGCCC TGAATGCTGCACACG TERM 659 599720 - 599707 - G 71 -9.5 -3.49419 | overlap 599706 CTCCTGCACAAAAAT GGCGC TGTA GCGCC CTGAATGCTGCACAC TERM 660 600916 - 600931 + G 81 -6.2 -4.82901 | CATGTAGAATCGGTG TTTGTG TATA CACAAA TTTTTGTCAAAAACA TERM 661 601292 - 601306 + G 83 -5.6 -5.05116 | GATTTACGAGCGGGT GGATGC GCG GCACCC TTTTCTTGTTTGTCG TPASS_0553 600385 - 601596 + | hypothetical integral membrane protein TERM 662 601786 - 601808 + G 74 -11.2 -3.27298 | TTTAGGAGATGGTTC GCGCGCACTG ATT CAGCGCGTGC TTGCTCATTACGGCG TERM 663 601996 - 602013 + G 91 -5.5 -5.40072 | opp_overlap 601981 GCCACATTCTATCGC GCAGAAG GTAG CGTCTGC TTTTTTTGGGGACAA gph2 601631 - 602299 + | phosphoglycolate phosphatase TPASS_0555 603553 - 602363 - | possible glutamate/aspartate transporter asnA 604768 - 603776 - | asparagine synthetase TERM 664 604304 - 604292 - G 72 -4.7 -4.66163 | overlap 604279 ATCCGCAGGCAAAAA CGCCC GTA GGCCG AACCTCTCACTTACC TPASS_0557 604873 - 605586 + | hypothetical protein TERM 665 605941 - 605994 + G 75 -11.9 -2.84467 | gap 2, opp_overlap 605930, overlap 605939 605983 GGAACGCACCTGTGT GGGAACCTGCGCTCACTGCAGCGTT ACTTGC GGCGTTGCA-TG-GCGCAGCTTCCC TGCTCTTGCTTTCTG TPASS_0558 605616 - 606524 + | hypothetical integral membrane protein TPASS_0559 606586 - 607791 + | hypothetical protein tktA 609829 - 607844 - | transketolase A TERM 666 608270 - 608254 - G 74 -5.8 -4.57073 | overlap 608255 CACTTTTCTCAAAAA CCGGCA CGTTC TGCCGA CTCAAAACGATACAC TPASS_0561 610791 - 609940 - | hypothetical protein TERM 667 610719 - 610674 - G 74 -7.7 -4.03234 | gap 2, opp_overlap 610674, overlap 610677 CCTCCTGCACAGAAA GGAGTGCCGCCTCATCTACCA CCGCAC TAG-AGA-GAGGCGGCACCGC ACGGGCACCTAAGCG TERM 668 611099 - 611072 - g 78 -12.7 -2.87132 | GCGGGCGCTCATAGA CGCAGCTGCAG ACGCAG CAGCAGCTGCG GTCAAATTCCAGCTC spsE 610962 - 612098 + | spore coat polysaccharide biosynthesis protein TPASS_0563 612089 - 612502 + | hypothetical protein TERM 669 613737 - 613719 - gT 74 -8 -3.98913 | opp_overlap 613719 CGCATACTTAAAGAA CAGTGCGG TTA CCGCGCCG TTATCCTTCCACCAA TPASS_0565 615637 - 614417 - | hypothetical protein TPASS_0564 612499 - 614535 + | hypothetical protein TERM 670 614708 - 614722 + gT 71 -2.8 -4.7878 | CACCCGCTGCGGATC GTATTG CGC CACTAC TTTCTTTTGTACGTG algI 617135 - 615648 - | alginate O-acetylation protein TPASS_0567 617787 - 617167 - | hypothetical protein TERM 671 617751 - 617739 - G 70 -6.2 -4.24149 | TGAGCAAAAGAATAA GCGC AAGCA GCGC CACTATCTTTGCCAT eda 618498 - 617866 - | 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxyphosphogluconate aldolase TPASS_0569 620944 - 618620 - | aminopeptidase P TERM 672 618665 - 618650 - G 74 -6 -4.57569 | opp_overlap 618656, overlap 618618 618635 618651 GCACGTGCGCAAAAA GGCGCG CGTA CGCGCA TCTAAAAACGGCGCG TERM 673 619052 - 619040 - G 100 -9.1 -5.60993 | opp_overlap 619039 CTCCTCAGAAAAAAA GGGAG GAT CTCCC GTGTGCTCTGCCCCA TERM 674 620432 - 620401 - G 72 -8.6 -3.72642 | overlap 620402 AAGGAACTACGGAAA CGCGATGCTCCTGC GGTA GCAGGAGCGCCCCA TCAAAGTCTAGGCGA TERM 675 620699 - 620687 - G 95 -9.1 -4.83169 | opp_overlap 620697 ATCTGTCCACAAAAA CGCAC GTT GTGCG GTCACCACCACTATT TPASS_0570 621814 - 620969 - | hypothetical protein TERM 676 621828 - 621809 - G 79 -4.9 -4.90778 | overlap 621812 621814 CCTACGCAAAGAAAA CCACACC GCTCTT GGCGCGG CAACGCACACACTCA TPASS_0571 622506 - 621841 - | protein Tp70 TPASS_0572 623606 - 622524 - | hypothetical protein TERM 677 623685 - 623656 - gR 81 -6.5 -4.68511 | gap 1, overlap 623652 CGGAACAGAAACAAA GCGTGTCCACGCTT CAA AAGC-CAAACACGC TTAAGACACACGGGA TPASS_0573 623597 - 623689 + | hypothetical protein TPASS_0574 625020 - 623716 - | carboxypeptidase, 47 kDa TERM 678 625413 - 625425 + H 71 -10.5 -3.18582 | opp_overlap 625409 CCAAGCAGAAATGCT GGCCG ACG CGGCC TTCATAGCTACCGTA prfB 627252 - 628358 + | peptide chain release factor 2 TERM 679 628962 - 628975 + GF 75 -5.2 -4.67353 | opp_overlap 628936, overlap 628940 GTGTGGAAGTGCGCA CCGC ACGCGC GCGG TTTTTCCGTCCCTGG TERM 680 629277 - 629263 - gf 72 -7.1 -4.18494 | opp_overlap 629262 CAGTGCCATTGAAAA CGCAC AACCG GTGCG CATTGTGTTTGACGT TERM 681 629288 - 629312 + GF 70 -7.1 -4.05788 | GTGCGCATTGTGTTT GACGTACATCC TCC GCATGCACGTC TTTCGTTTCAGGGCG TPASS_0577 628250 - 630094 + | hypothetical protein ftsY 630101 - 630988 + | cell division protein TERM 682 631122 - 631112 - g 77 -3.2 -5.04385 | CACAGGCGCAAAAAA CAGA CAC TCCG CTTGATTCCTCCAGC TERM 683 631657 - 631645 - g 73 -4.1 -4.83615 | opp_overlap 631632 GACGTGTTAGAAAAA CGTTA TCG CAACG GCGTATTACAGGCAA TPASS_0579 630985 - 631761 + | hypothetical protein TERM 684 632201 - 632188 - g 73 -3.8 -4.74801 | TAATTTGAGTAAAAA GCAC TCCATT GTGC TCGGATATGAACTGG TERM 685 632515 - 632526 + G 88 -2.2 -5.52986 | AGAATCCTGGCGGGA GTAC AACC GTGC TTTTTTTAGTGCGCT TPASS_0580 631754 - 633043 + | hypothetical integral membrane protein TPASS_0581 633036 - 633716 + | ABC transporter, ATP-binding protein TERM 686 633892 - 633906 + G 85 -2.9 -5.36441 | AGGAAAACGACGTTC CTTTT TGCGC AAAAG TTTTTTCTGTGCCGC TERM 687 634199 - 634230 + G 100 -2.2 -5.9873 | opp_overlap 634191, overlap 634200 634203 GGAAAAACAGGGCGT GCAGGGGGGAAT ATCCGCGC AGTTCCCCCTGA TTTTTTTTCTAGTGA TERM 688 634249 - 634261 + G 84 -7.7 -4.59773 | TTTTTCTAGTGAGCG TGGAC TTC GTCCA TTTTTAACCGTCGAA TPASS_0582 633713 - 635200 + | hypothetical integral membrane protein TPASS_0583 635309 - 635184 - | hypothetical protein TERM 689 635248 - 635260 + gF 74 -7.7 -4.07687 | TCCGGCTCGCAGACG GATGG GTA CCATC TTTTAGAAGAGCACT TERM 690 635530 - 635513 - gH 72 -7.7 -3.86897 | overlap 635514 TTGAGTTGCCAGAAA CTTCCCC CTAC GGGGAAA ATGAGAAGCCGATGG TERM 691 636048 - 636027 - gH 70 -9.5 -3.31726 | overlap 636025 GGTTTTGAGAGAAGA CTTCTCTGC CAAC GCAGAAAAG CTGCGGGCTGCAATC TERM 692 636462 - 636478 + GH 78 -6.5 -4.57569 | overlap 636448 636465 GGCGCTCAAGGACGA GCAGCTC TTC GAGCTCC TTTTTAAACACGTAG TPASS_0584 635296 - 636705 + | hypothetical protein TERM 693 637790 - 637805 + G 91 -11.8 -4.07568 | opp_overlap 637787 CATGAATACAATCCT GCGCGC GCAC GCGCGC TTTTAGCAGAAGCGA oppA 636698 - 638341 + | oligopeptide ABC transporter, periplasmic binding protein TERM 694 638484 - 638463 - g 82 -2.1 -5.36441 | opp_overlap 638476 GCTCTAGAGAAAAAA TGGCAGGCC TATT GGCGCGACA AGCGCGTCTTTTGTG TERM 695 638476 - 638492 + G 81 -7.2 -4.60797 | opp_overlap 638463 AATGGCAGGCCTATT GGCGCG ACAAG CGCGTC TTTTGTGTGTCCGAG TERM 696 639200 - 639213 + G 84 -8.1 -4.62336 | opp_overlap 639185 639184 639199 TCGCGTGTACACCAC GCGTG CGGA CACGC TTTTTGGAGTAACGT TERM 697 639380 - 639362 - g 75 -6.7 -4.43477 | gap 1, overlap 639364 TTTAGCGAAGGAAAA GACCGGTG TTTT CACCGG-C GCGTACGTGCGCAAT TERM 698 639379 - 639364 - g 79 -10.4 -3.82321 | overlap 639362 TAGCGAAGGAAAAGA CCGGTG TTTT CACCGG CGCGTACGTGCGCAA TERM 699 639740 - 639701 - g 70 -10.9 -2.74144 | gap 3, opp_overlap 639727, overlap 639700 TGCCCATCTTGAAAT GCGT-GGCG-CAGGTGCACG GCG CGT-CACCTATCGCCTACGC GACTGGGTGTTCAGC TERM 700 639805 - 639840 + G 75 -5.4 -4.63218 | gap 1 TGCACTGTCCTTCCT GCGGTGTTGTACCTCTC CCT GAGAG-TGCGCTGCCGC TTTTGTTACCCGAAA TERM 701 639983 - 639970 - g 74 -8.1 -4.05321 | opp_overlap 639974 GAGAAACAAACACAA TGCCC CAGT GGGCA GGATCCTGCTGGTAT TERM 702 640056 - 640076 + G 77 -9.7 -3.60792 | GCACCCGAGAAGGAG CGTTACTGG GCG CCAGTGGCG TTATATGTAGGTGGT TERM 703 640656 - 640635 - g 77 -6.5 -4.68593 | gap 1, opp_overlap 640631 640635, overlap 640639 CGGACTATTCAAAAA GTGACCGACG ATA CGTCGG-CGC TTAGTTTTAACACGG TERM 704 640653 - 640639 - g 75 -11.4 -2.85361 | opp_overlap 640635 640631, overlap 640635 CTATTCAAAAAGTGA CCGACG ATA CGTCGG CGCTTAGTTTTAACA leuS 638430 - 641066 + | leucyl-tRNA synthetase TPASS_0587 641276 - 641046 - | hypothetical protein TPASS_0588 642067 - 641303 - | hypothetical protein TERM 705 641729 - 641716 - G 74 -2.3 -5.06103 | ACAACTCCCAAAAAA CACGC TTAT GCACG GGAGAAATATTCTGT TERM 706 641803 - 641792 - G 73 -3.6 -4.7871 | AATCAGTACCAAAAA CACG TCAG CGCG CGAGCCGCCATCCTT ptsH 642421 - 642155 - | phosphocarrier protein HPr TPASS_0590 642509 - 642393 - | hypothetical protein ptsK 643425 - 642466 - | HPr kinase TERM 707 644390 - 644419 + GH 91 -10.7 -4.18018 | gap 1 TCATCCGTTCAGACG GGCGCACCCTCTAC TGG GCAGAGGG-GCGTC TTTTACCTCGAGAAC TERM 708 644743 - 644726 - gH 84 -4.1 -5.23316 | overlap 644710 CAGTACAGGAAAAAA TCCTCAC TGCC GCGAAGA CGCATGCTCACGTAC TERM 709 644959 - 644949 - gH 79 -2.4 -5.252 | overlap 644951 CATCCCCATAAAAAA GCGC TGG GCTC CACCTGCAGAAATCA TERM 710 645441 - 645426 - gH 76 -3.2 -5.00616 | overlap 645427 645439 TTTGCTTTCAAAAAA GCATGC TCAG ACACGC GCGTCTCGCAGAAGC TERM 711 645550 - 645565 + GH 77 -3.2 -5.08824 | opp_overlap 645541, overlap 645543 AAAGAACGAAGCGAT GCGC TGTGGATT GCGC TTTTTTCCGTACGGC TPASS_0592 644188 - 645690 + | hypothetical protein TERM 712 645913 - 645925 + GT 70 -6.2 -4.18164 | TGGGGGTGTTTTTCT GCGC ACCAC GCGC TTCTTTTGCCGAGTT TPASS_0593 645627 - 647660 + | hypothetical protein TERM 713 647712 - 647735 + T 77 -4.6 -4.86001 | gap 1, opp_overlap 647716 ACTCGGAAGCAGGCA CGAACGT-GTG CGC CACCACGTTGG TTTTTATGAGCTCAT TPASS_0594 648355 - 647747 - | hypothetical protein adk 649018 - 648383 - | adenylate kinase pcnB 650154 - 649042 - | polynucleotide adenylyltransferase TERM 714 649378 - 649364 - G 86 -4.2 -5.41746 | AAGCTTGCAAAAAAA GCGCTC TCA AAGCAC GGCACATCCCGCATA TPASS_0598 652325 - 650262 - | hypothetical protein TERM 715 651906 - 651931 + g 73 -11.9 -2.80816 | AGGGGTGATCTGCCA CGTATCCGGTT TATA ATCCGGATACG TGTACTGGGTGAGAA TERM 716 652042 - 652018 - G 93 -10.6 -4.37092 | opp_overlap 652018 AGCCCCCCTACAAAA CGCGGGCTGA CAGCT CCCGCCCGCG TCACTTCCGCCCCAT TERM 717 652216 - 652226 + g 73 -4 -4.83615 | TCAGACCGGGCAGAT TCAA GCG TTGA TTTTTGTGAGGGATA TPASS_0599 653018 - 652362 - | hypothetical protein TERM 718 652479 - 652492 + g 82 -8.1 -4.55093 | CACATTCATGGGAAC CGGCA TAAT TGCCG TTTGTTGTTCTCTGA TPASS_0600 654377 - 653025 - | possible zinc protease TERM 719 653560 - 653574 + g 77 -2.8 -5.055 | opp_overlap 653560, overlap 653558 653557 CCTGAACGCAGCACA GTCAAT ACG ACTGAC TTTTTTCGAAATTCC dxr 655525 - 654374 - | 1-deoxy-D-xylulose 5-phosphate reductoisomerase TERM 720 655243 - 655228 - G 71 -3.2 -4.74453 | gap 1, overlap 655230 CAAGAGAGGCAAAAA GACCAGC AGC GCCGG-C AATACCGTTTACCAC TERM 721 655381 - 655350 - G 81 -10 -3.91144 | GTGATATCTGATAAA GAGAACTCGCGCGC CAAC GCCCGCGCGTACTC GGTCTGCCGGTGACC cdsA 656364 - 655501 - | phosphatidate cytidylyltransferase TPASS_0603 657047 - 656361 - | hypothetical protein TPASS_0604 657604 - 657053 - | ribosome recycling factor TERM 722 657105 - 657124 + g 82 -7.8 -4.57073 | overlap 657123 TACCGTGCAACGTCT GCGACAGA AGCG TCAGTCGC TTTTTGGAAGGCCTC TERM 723 657259 - 657235 - G 80 -11.3 -3.36749 | TATTGCGAATAGCAA CGCGCGCCTGC TCG GCTAACGCGCG CGCCTGCCTGACAAG tsf 658580 - 657708 - | translation elongation factor TS rpsB 659546 - 658671 - | ribosomal protein S2 TPASS_0607 659661 - 659515 - | hypothetical protein TPASS_0608 660801 - 659911 - | hypothetical protein TERM 724 661603 - 661637 + G 75 -4.3 -4.82901 | overlap 661603 661604 TTGCCGCGTGTGCAC G-GGTGCGCAGTGCACT TGC AG-GCGCTGTCCACCGC TTTTTCTCCGAGCGA asnS 661119 - 662690 + | asparaginyl-tRNA synthetase TERM 725 662794 - 662761 - g 77 -7.3 -4.55128 | gap 1, opp_overlap 662765, overlap 662762 ACTCTCAAAGCAAAA TCCGGCGGCGAC-GCA CGC TGCTGTCTCCGTCGGC GGCTGTGCGCTCCTC TERM 726 662793 - 662762 - g 76 -10.8 -3.32354 | gap 1, opp_overlap 662765, overlap 662761 CTCTCAAAGCAAAAT CCGGCGGCGAC-GCA CGC TGCTGTCTCCGTCGG CGGCTGTGCGCTCCT TERM 727 663940 - 663925 - g 81 -4.6 -5.1287 | overlap 663930 TCGATATGGAAAAAA CCAAGG TCAC CCCCGG AGGGCCGGTGGCGTA TERM 728 664667 - 664656 - g 72 -4.4 -4.65895 | TCTCCCATTGAAAAA GTGA CGCT TCAC GCACAGTGGGAGCAG tprH 662700 - 664781 + | protein TprH TPASS_0611 664923 - 665702 + | ABC transporter, ATP-binding protein TERM 729 666553 - 666541 - g 90 -7.7 -4.94902 | GAAGTACTACAAAAA TGCGT TGC ACGCA GGCGCCGTGGAGCTG TERM 730 666839 - 666816 - g 77 -3 -5.09204 | overlap 666818 ATACTGGAACAAAAA CAGTGCACCT GGGC AGGAACACGG TATCGGAGGTACATG TERM 731 667057 - 667067 + G 85 -3.2 -5.39721 | AATCGGCAGAATCAG TGAC CGC GTCG TTTTTTATCTCATGC TPASS_0612 665783 - 667222 + | hypothetical protein TERM 732 668022 - 667995 - g 84 -4 -5.26875 | overlap 667996 667997 667999 CGTGGAAGGAAAAAA TTCACACGCGCA CATC TGCGCCTGTGGG GTGGTAAAAGACGGT TERM 733 668020 - 667997 - g 71 -11 -2.84518 | overlap 667996 667995 667999 TGGAAGGAAAAAATT CACACGCGCA CATC TGCGCCTGTG GGGTGGTAAAAGACG TERM 734 668137 - 668156 + G 74 -10 -3.48115 | overlap 668135 CTTGACAGAACTGCC GTGGGGGT TAGC ATCCCCAC TATCTTTTGTGACGA TPASS_0613 667249 - 668397 + | hypothetical protein TERM 735 669012 - 669032 + G 70 -4.7 -4.48317 | opp_overlap 669012 CACGGCGTGCCAAAT GTTGCAG ATTTAGG CTGCGAC TTCTTTGTTTTCTCC TERM 736 669112 - 669144 + G 73 -11.3 -2.80791 | opp_overlap 669115 ACACGCTCCTGGAAT CCATGCCTCCTTTTT TGT ATGGGGGAGGCATGG TGGATTTTGTGACTG nifS1 668394 - 669608 + | nitrogen fixation protein nifU 669659 - 670102 + | nitrogen fixation protein rpiA 670123 - 670887 + | ribose 5-phosphate isomerase TERM 737 670912 - 670889 - T 81 -12.4 -3.53012 | gap 1, overlap 670869 CGGCCTCCTTCTAAA CGGG-GCACGC TGA GCGCGCACCCG CTCAGGTGCGGAAGA TPASS_0617 671192 - 670914 - | hypothetical protein TPASS_0618 671647 - 671288 - | hypothetical protein TPASS_0619 672515 - 671703 - | hypothetical protein TERM 738 672214 - 672243 + g 86 -14.3 -2.93857 | gap 1, opp_overlap 672213, overlap 672210 672241 TCCAGCCCCACCAAC GGTGTCTCCGGCGC ATA GCG-CGGAGGCGCC TGGTTCTCTGTATCT tprI 674341 - 672512 - | protein TprI TERM 739 674086 - 674124 + g 83 -13.2 -3.00525 | gap 1, overlap 674080 TCAGCTGCAGCTGTG CCCACACCC-CTGAGCG TGCCTC CCCTCGGCGGGTGTGGG TGTGCTTTGACACCA tprJ 676675 - 674399 - | protein TprJ TERM 740 675360 - 675371 + g 72 -4.4 -4.61482 | CTACCCCCGACCGCT TGCA TGTT TGCA TTATTTTTTGCCACA TERM 741 675691 - 675705 + g 73 -11.4 -2.75832 | overlap 675690 675702 TCGCCTGTTGCACTA CCTGGG TTA CCCAGG CTTCCTGTTTTTGAC TERM 742 675702 - 675712 + g 85 -6.8 -4.84529 | overlap 675691 675690 ACTACCTGGGTTACC CAGG CTT CCTG TTTTTGACTTTCTCC TERM 743 675746 - 675773 + g 71 -11.2 -2.94938 | overlap 675748 675767 GAAGAGGTTATTTGA GAGGGCGGTGAG TTCA CTCTGCGCCCTC TGTGTGCGATTTTGA TPASS_0622 678516 - 676735 - | hypothetical protein TERM 744 677003 - 676978 - GH 71 -11.1 -2.85364 | gap 1, overlap 676977 676975 ATAGTACGAAAATAT CGACCGCAGCGT ACC ACGC-GCGGACG CACTCCGAGCTGCAA TERM 745 677148 - 677117 - GH 74 -7.3 -4.1347 | gap 1 GCCGAATGATATAAA CGCCGCGCAAGAGA AATCG CCTCCTGCGC-ACG ACCTGAACCACTGTA TERM 746 678046 - 678032 - Gg 100 -2.1 -5.79526 | gap 1, overlap 678033 ATATCCGAAAAAAAA TCC-GG TTCT CCAGGA ATGAGCGGATACGTA TERM 747 678602 - 678616 + GH 74 -7 -4.29139 | opp_overlap 678592, overlap 678603 ACAACGTACGCATAC CCGGCG CAC CGCCGC TTCTTTTCCCTTTAC TERM 748 678603 - 678615 + GH 74 -10.5 -3.16399 | opp_overlap 678592, overlap 678602 CAACGTACGCATACC CGGCG CAC CGCCG CTTCTTTTCCCTTTA TERM 749 679309 - 679289 - gH 77 -3.3 -5.08824 | gap 1, overlap 679303 GCCGCAGTCAAAAAA CTGCAGTG GAATTA CAC-GCAG CTGCGTGACTGGCCC dniR 677933 - 680272 + | membrane-bound lytic murein transglycosylase D TERM 750 681653 - 681631 - g 72 -7.7 -3.86524 | overlap 681619 ACACGGTGCGACAAA GCCTATCGC GCCAA GCGATACGC ACGCGAACAAAGCCA TPASS_0624 680276 - 681706 + | hypothetical protein TERM 751 682160 - 682120 - g 79 -3.9 -5.14477 | overlap 682111 682122 682123 682125 TATATACTCAAAAAA TATGAGGCTGCAGGCAG CGCACGC CTGCCTCCTGCCTACTA CAAGCTCACACTCAT TPASS_0625 681706 - 682458 + | hypothetical protein TPASS_0626 682455 - 683630 + | possible exonuclease TERM 752 684638 - 684620 - g 78 -12.4 -2.96695 | overlap 684606 684617 TTGCTCATGAAACGA GCTGCGCA TGT CGCGCAGC AGTCATCCATTGAAG TERM 753 685028 - 685005 - g 72 -5.3 -4.47485 | overlap 685020 AAAAACTTGAGAAAA TACACGCAC AAAAAA GCGCGTATA GCACACGGGCACGTG TERM 754 685038 - 685020 - g 88 -5.2 -5.29782 | overlap 685005 685032 TACACGCACAAAAAA GCGCGTAT AGC ACACGGGC ACGTGAGCAGCTCCT TERM 755 685276 - 685262 - g 74 -8.6 -3.96224 | overlap 685275 GAAACCAGCGAGAAA GATGTG TAC CACATC CTCACCTCTGAGCGT TERM 756 685883 - 685865 - g 81 -8.2 -4.41633 | opp_overlap 685878, overlap 685862 CATGTTCAAAAAGAA TACATGCA CCT TGCACGTA CCGTGTGTTGCGCAC sbcC 683627 - 686770 + | exonuclease TERM 757 686836 - 686851 + G 72 -10.4 -3.41704 | opp_overlap 686835 686836, overlap 686834 686827 686825 TACTTTTTTCACAAG CCGCAC GAGT GTGCGG TGTTTGAAGTATTCT TPASS_0628 686767 - 688248 + | hypothetical protein TERM 758 688484 - 688517 + G 70 -4.5 -4.44667 | gap 1 GGTGGGCACATCGGT GTGTGC-GCAGACGCT GCA AGAGGCTCCCGCACAC TTTCTTCTTGAGGGA TERM 759 688674 - 688660 - g 86 -4.2 -5.42198 | overlap 688661 688663 CTGCAAAAAACAAAA GCACAC CGG GTGTCC CACGCCGTGTCACGC TERM 760 688675 - 688716 + G 85 -2.8 -5.45802 | opp_overlap 688663 688661, overlap 688678 688679 688679 GCACACCGGGTGTCC CACGCCGTGTCACGCGCG CCCTGC CGCGCGTCAAACCGGATG TTTTTGTTTTCGGGA TPASS_0629 688419 - 689243 + | hypothetical protein TERM 761 690303 - 690288 - g 74 -3.2 -4.91109 | CCTGTACCAGAAAAA CGATGA AGGG TCAGCG CATGAATGCCACGCG cheR 689413 - 690324 + | chemotaxis protein methyltransferase TERM 762 691402 - 691416 + G 88 -11.4 -3.85698 | GGGAAGGGACGGTGC CGCGCA GCT TGCGCG TTTATACACAGAAGG cheB 690371 - 691582 + | protein-glutamate methylesterase TERM 763 692368 - 692321 - g 77 -11.3 -3.14693 | gap 1, overlap 692319 692317 692355 CGGACGATGAAGAGA CGGTGCGGCGCAAGGTCCGTGC GATGT ACACAGATCCTGCGC-GCACCC GGGCAGATATACCAG trpS 691687 - 692700 + | tryptophanyl-tRNA synthetase msrA 692841 - 693716 + | protein-methionine-S-oxide reductase lig 693835 - 696306 + | DNA ligase TPASS_0636 697111 - 696341 - | hypothetical protein TERM 764 697128 - 697143 + r 91 -7.6 -5.00616 | CCCTATGGAGCGGTG CGATGA GCGA TCATCG TTTTTTCACCGGAGA miaA 698099 - 697149 - | tRNA delta(2)-isopentenylpyrophosphate transferase TERM 765 698241 - 698225 - R 74 -2.1 -5.00616 | opp_overlap 698232, overlap 698227 698229 698230 TTCTTGCTTAAAAAA CACACGC GGG GCACGAG ACACCGCCTGACCCC TPASS_0638 698757 - 698323 - | hypothetical protein TERM 766 698686 - 698669 - G 70 -9.9 -3.14229 | opp_overlap 698676, overlap 698667 ACACCCGCATCAACA TGCACGA GGTC TCGTGCA CCACTTGCAAGCAAG TERM 767 699009 - 698993 - H 71 -11.5 -2.92668 | overlap 698988 TACCACTGAACTACA CCCACCG CTC CGGCGGG AGCCTAGTGCAAAGT TERM 768 699502 - 699517 + G 81 -6.8 -4.71426 | gap 1, overlap 699501 CGCTTCTCCATTATC GCG-CGC TGT GCGCCGC TTTTATTCGTGGAGA TERM 769 700111 - 700130 + G 85 -7.1 -4.8543 | overlap 700112 GGTCACTGAGCTCCC TGCGCGA CAAAGA TCGCGCG TTTTTCTCCCGCTTC mcp3 699177 - 701141 + | methyl-accepting chemotaxis protein TERM 770 701404 - 701422 + G 72 -8.1 -3.89346 | opp_overlap 701403 701399 ACATCAAAACGATAG CGCAGCT GCAGA GGCTGCG TTTCTGCGGTACACG mcp4 701165 - 703009 + | methyl-accepting chemotaxis protein hisS 704355 - 703027 - | histidyl-tRNA synthetase TERM 771 704072 - 704060 - G 70 -4.7 -4.52214 | overlap 704054 704061 704062 AAAGGAAAATACAAA CGCGC ATA GTGCG TTGCAACGAACCGCG TERM 772 704604 - 704618 + G 75 -5.6 -4.59511 | opp_overlap 704606, overlap 704606 CAGAATAATATAGCA GAGCTC GAA GAGCGC TTTTTGCAAACTCTT TERM 773 704756 - 704743 - g 73 -3.9 -4.7497 | TCTATTTACTAAAAA CTTTT CCTG AAAAG GCAGCGCGCGGCGCG TERM 774 704775 - 704756 - g 83 -10 -4.08064 | gap 1, opp_overlap 704765, overlap 704757 704760 AACTTTTCCTGAAAA GGCAGCGCG CGG CGCGCT-CC GTGCCGTTATAGCCT TERM 775 704772 - 704760 - g 70 -10.5 -2.74605 | opp_overlap 704765, overlap 704756 704757 TTTCCTGAAAAGGCA GCGCG CGG CGCGC TCCGTGCCGTTATAG TERM 776 704765 - 704781 + G 80 -11.5 -3.32963 | opp_overlap 704760 704756 704757 TGAAAAGGCAGCGCG CGGCGCG CTC CGTGCCG TTATAGCCTACGACT TERM 777 705465 - 705455 - g 72 -6.8 -4.2461 | opp_overlap 705455 ATGTGCAGTAAGAAA CACC CGC GGTG TGTTGCAGTTGCTCA TERM 778 706038 - 706053 + G 72 -4.6 -4.72007 | overlap 706040 AGTCCAGAAAATCCT GCGCAG ACAT CTGCCC TTTCTTTTCCTCAGA manB 704496 - 706256 + | phosphomannomutase dnaQ 706253 - 706900 + | DNA polymerase III, subunit epsilon lysS1 708483 - 706897 - | lysyl-tRNA synthetase TERM 779 707079 - 707053 - G 74 -10.2 -3.52192 | GGCAACCGCATACAA CTCAGCAGAAAG TTC CTTTTCGCTGAG TACGTCAGTGCGTGG TERM 780 707683 - 707670 - G 73 -3.7 -4.80487 | CATAACGAAAAGAAA CAGGC GCAG GCCAG TGATAAATGTGATCA TPASS_0645 708690 - 708514 - | hypothetical protein TPASS_0646 710071 - 708749 - | hypothetical protein TERM 781 708842 - 708832 - GR 74 -6.8 -4.22554 | GCACTGAAGAAAGAA TCCC TGT GGGA GAAAAATGAAACACA serS 711263 - 709983 - | seryl-tRNA synthetase TPASS_0648 713361 - 711313 - | hypothetical protein TERM 782 712720 - 712709 - GR 90 -4.4 -5.41143 | opp_overlap 712709 TACGCGGCAAAAAAA TGCA CCTG TGCA TTATCACCGTGATAT tlyC 714103 - 713306 - | hemolysin TERM 783 713425 - 713409 - GR 75 -4.3 -4.77165 | overlap 713411 TCTTGGATAATAAAA TCGAAGG CAC CCCACGA AACCTTCTCGTACTT TERM 784 713430 - 713448 + gr 87 -8.2 -4.56775 | opp_overlap 713411 713429 GCACCCCACGAAACC TTCTCGTA CTT TACGGGAA TTTTTCCAAAAAGAT TERM 785 713969 - 713952 - GR 70 -3.3 -4.6971 | opp_overlap 713953, overlap 713953 713964 GAAAGCTCAAGAAAA TCCACGT CAAT ACGCGGT ATCATCACCTCGCGC TERM 786 714014 - 714029 + gr 73 -4 -4.78572 | gap 1, opp_overlap 714001, overlap 714016 AAGATCCACTATACC GC-GGAT CAT ATCCTGC TTTTCTTCATTCAGC TPASS_0650 714573 - 714091 - | hypothetical protein TPASS_0651 716990 - 714579 - | hypothetical integral membrane protein potA 717166 - 718305 + | spermidine/putrescine ABC transporter, ATP-binding protein TERM 787 718419 - 718430 + G 74 -5.8 -4.56597 | CCCCTTACGGTGGTC GCTG TGTA CAGC TTTTTGCAAAAGGGC TERM 788 718676 - 718706 + G 74 -6 -4.56597 | opp_overlap 718676, overlap 718690 718691 TCTCATCAGGATAAA CGCCTGGATCACTA TCC TGGGGAACCAGGGG TTTTTGAACGAAGCA TERM 789 718723 - 718735 + G 70 -4.1 -4.71426 | overlap 718724 TTTTGAACGAAGCAC TCAAG TCG CTTGG TTTTATTACTCGAAG potB 718302 - 719201 + | spermidine/putrescine ABC transporter, permease protein TERM 790 719778 - 719796 + G 100 -11 -5.00138 | opp_overlap 719761, overlap 719765 719761 GATCCCTGCCATCAT GCCAGGCA TAC TGTCTGGC TTTTTACTTTCAGTA potC 719194 - 720012 + | spermidine/putrescine ABC transporter, permease protein potD 720048 - 721094 + | spermidine/putrescine ABC transporter, periplasmic binding protein TPASS_0656 721063 - 721164 + | hypothetical protein csrA 721370 - 721149 - | carbon storage regulator TPASS_0658 721816 - 721364 - | possible transmembrane protein TERM 791 721453 - 721463 + g 87 -4.6 -5.29445 | CCATCGCCACTTGCA TCGC CTT GCGG TTTTTCTTGTTCACA flgL 723085 - 721835 - | flagellar hook-associated protein 3 TERM 792 722153 - 722131 - G 73 -12 -2.72661 | GATCACCTGCAAGCA GGGCATTGCG CAC CGCAATGGCC ATGTCAAAAATGGAC TERM 793 722258 - 722237 - G 89 -13.1 -3.33399 | opp_overlap 722234, overlap 722232 GGTAATCAAACCCAA CGAGGCAAA CACG TTTGCCTCG TCCTCATCTTGCAAC TERM 794 723052 - 723038 - G 90 -7.1 -5.06414 | CTCCCTTAAGAAAAA GGCAC TGTCT GTGCC CTGCATGTGTGAGCT flgK 724996 - 723119 - | flagellar hook-associated protein 1 TERM 795 723188 - 723177 - G 70 -3.6 -4.63486 | ACCGCCGCAATAAAA CGCG CAGA CGCA TTATAGCCGTGCTGA TERM 796 723371 - 723359 - G 74 -3.3 -5.0133 | CACTTCTGCAAAAAA CTCGT CAA ACGTG TGTCGATTGCCAATC TPASS_0661 725614 - 725102 - | hypothetical protein TERM 797 725720 - 725683 - R 100 -16.3 -5.65927 | TAGTGAAATAAAAAA CCGTCCAGTGGTCTGCA GCTC CGCAGGCTACTGGACGG CTCGCACCTGCTGGC cbbA 726735 - 725737 - | fructose-bisphosphate aldolase TERM 798 727034 - 727049 + G 73 -3.9 -4.8048 | overlap 727035 TATGGTGGCGGGCTT TGCGC TGACGT GCGCG TTTTTGGTGTCCCCC TPASS_0663 727002 - 727730 + | possible outer membrane protein flaA2 727727 - 728452 + | flagellar filament outer layer protein TPASS_0665 729225 - 728470 - | hypothetical protein TPASS_0666 729515 - 729222 - | hypothetical protein udk 731226 - 729559 - | uridine kinase TERM 799 730287 - 730305 + g 85 -3.1 -5.44721 | opp_overlap 730287 GATCGTAACCAAGTA CTTGCAG CTGCA CTGAAAG TTTTTTTGCAATCGT TPASS_0668 732059 - 731457 - | hypothetical integral membrane protein TERM 800 731684 - 731661 - G 85 -6.8 -4.74611 | CATCACAAAAAATAA CGTATGAACA TTTA CATTCATACG ATCGGAAACAAATCG dnaE 735568 - 732056 - | DNA polymerase III, subunit alpha TERM 801 732289 - 732321 + g 85 -8.6 -4.57353 | gap 2 TCACCTCGATGTGCA CTTC-CTGC-GAAACG CCA CGTTTCTGCAGTGGAG TTTTCTCTCCTGACG TERM 802 735655 - 735665 + r 81 -6.8 -4.72272 | ATATATTTTTATCCA CCCT TGC AGGG TTTTTGCTCGCAGCG ddlA 736912 - 735722 - | D-alanine--D-alanine ligase TERM 803 736473 - 736462 - G 72 -7.2 -4.26792 | AGACAAACGGTAAAA CGGG AAGT CCCG CCGCCTGCCATAGCA TPASS_0671 737948 - 736914 - | possible sn-1,2-diacylglycerol cholinephosphotransferase TERM 804 737384 - 737361 - G 73 -3.7 -4.86226 | opp_overlap 737361, overlap 737363 ACAGGAAAAAAACAA CGGCGTGAG GAACAG CGCACGCAG TGTTTCGAACGACCC TERM 805 737566 - 737541 - G 81 -6.9 -4.67651 | gap 1, overlap 737542 737543 737560 ACACGTCAAAAGAAA TGGCTCGCGTAT ACG AAACGCGAGC-A CGAAAATTCCTGCCA TERM 806 737565 - 737543 - G 73 -12 -2.62981 | overlap 737541 737542 737560 ACGTCAAAAGAAATG GCTCGCGTAT ACG AAACGCGAGC ACGAAAATTCCTGCC glyS 739367 - 737979 - | glycyl-tRNA synthetase gltX 741115 - 739502 - | glutamyl-tRNA synthetase TERM 807 739871 - 739848 - G 91 -5.2 -5.40072 | opp_overlap 739864 GGTTCTTGAAAAAAA CAACGCACCA ACTC CGGCGCATCG GTTAGAAACCGCAAC TERM 808 740444 - 740428 - G 70 -7.3 -4.09685 | overlap 740430 CCTGAGCGCGCAAAA CATGCGT AAT ACGCATA GCATGGTCATCTACC TERM 809 740974 - 740960 - G 82 -11.4 -3.53343 | opp_overlap 740962 AAGGTTCTGCTCAAA CGCTGC AGT GCAGCG ACTGCGGTCAGTATC TERM 810 741430 - 741452 + G 75 -11.3 -3.09516 | gap 1, overlap 741433 GCGAAGTGCGACTGT GCGCG-CACG GCGC CGTGGCGCGC TTCCGTCCTCGCAGG TERM 811 741433 - 741485 + G 100 -14 -3.68351 | gap 1, overlap 741430 AAGTGCGACTGTGCG CGCACGGCGCCGTGGCGCGCTTCCG TCCT CGCAGGC-TGCCGCTGCGCCGCGTG TTTCCCTGATGGAAG TERM 812 741614 - 741636 + G 73 -9 -3.57792 | opp_overlap 741611 741610 741606 GGAAGGAGGAAGCTG CGCACCGCAG TCC CTGAGGCGCG TTTAGACCTCCATGG TPASS_0674 741293 - 741901 + | hypothetical protein TERM 813 742314 - 742302 - g 70 -5.5 -4.30576 | GCTTGAGCAGGAAAA CGCTG CTC CAACG CTCTCTTCCCTTTCT TERM 814 742617 - 742607 - g 70 -6.8 -4.07568 | opp_overlap 742596 742607 TCGCTCTCGGGAAAA GTCC CGC GGAC TTTAAGGGCAGGCTC TPASS_0675 741907 - 742905 + | hypothetical protein TPASS_0676 743195 - 742917 - | hypothetical protein TPASS_0677 743825 - 743217 - | hypothetical protein TERM 815 743725 - 743678 - G 74 -11.2 -3.12999 | gap 1 GCATCCCACAGTCAA CGCAGGCGTGCACCTGGCGCGCA AGC TGC-CGCGCGACGTACGCCTGCA CCACCCCGCTTCCTG TERM 816 744116 - 744138 + G 82 -9 -4.23758 | TTATTCGCAGGTTTG GACGCGTGCG GCG TGCGCGCGGC TTTTACCTATACACT TERM 817 744361 - 744383 + G 81 -8.4 -4.4017 | TACGCACATGCCGAA CGCGCGCA GGAAGTG TGTGCGCG TTTTCTCAACCTTGC TERM 818 744534 - 744556 + G 71 -9.1 -3.46534 | gap 1, overlap 744532 TGCCCACTGTGCCGC GCGCG-CCCC TGCG GGGGACGTGC TCTTTGCTCCGATTG TERM 819 744743 - 744715 - g 100 -11 -5.24989 | gap 1 CCACACACGAAAAAA CGGCGCA-GAGGT CTGA ACCGCGTGCGCCG CGCACAAAAATGCGC TERM 820 744782 - 744754 - g 90 -7.4 -4.82901 | CGCCGCGCACAAAAA TGCGCGCGGC AAGAGCGCG ACCGCGCACA GCTTATAACGCTTAT TPASS_0678 744079 - 745002 + | hypothetical protein TPASS_0679 744999 - 745316 + | hypothetical protein gcp 746415 - 745357 - | o-sialoglycoprotein endopeptidase TERM 821 745846 - 745832 - G 95 -12.8 -4.20696 | opp_overlap 745826 745825 TGAGGAAGCGGAAAA CGCGCG GCA CGCGCG TCACCCTGTTCTGCT alr 747599 - 746466 - | alanine racemase ftsJ 748230 - 747628 - | cell division protein TERM 822 748186 - 748166 - G 70 -10.4 -3.16743 | gap 1, opp_overlap 748162 748167 748181 AATTTATACACCGAA CGCGCGCGG TACC CCGCG-GCG GCTGCCTTTTTTGCC TERM 823 748794 - 748815 + G 79 -2.2 -5.24129 | gap 1, opp_overlap 748794 748797, overlap 748798 GACACGCTCAGCATA GAACCTGCC CTTAA GGC-GGCTC TTTTTTCTGCCACGA TPASS_0683 748323 - 749417 + | octaprenyl-diphosphate synthase mglB2 749710 - 750921 + | methylgalactoside ABC transporter, periplasmic galactose-binding protein TERM 824 752167 - 752153 - g 95 -7.1 -5.27938 | ACTCTCAAAGAAAAA GCTGC AGGAG GCAGC GGAGCGGGAAATAAA mglA 751041 - 752531 + | methylgalactoside ABC transporter, ATP binding protein mglC 752546 - 754141 + | methylgalactoside ABC transporter, permease protein recG 756329 - 754269 - | DNA recombinase TERM 825 755697 - 755679 - G 100 -3.2 -5.80817 | overlap 755671 TTGAAGAGAAAAAAA TTCTTCAA ATA TCAAAGAA TGTTTTCCCTTCGCA mccF 757398 - 756385 - | immunity protein TERM 826 757399 - 757414 + r 70 -3.2 -4.72333 | TCCTTCATCTTGCAT CTATCG CTTC CGACAG TTTTTCCGTATGGTT TPASS_0689 758781 - 757399 - | GTP-binding protein TERM 827 758554 - 758544 - G 95 -6.8 -5.24129 | opp_overlap 758543 TTTTTTCAGAAAAAA CGGT AAA ACCG CTCGTGTCAACAAGT TPASS_0690 759398 - 758817 - | hypothetical protein TERM 828 758874 - 758859 - G 93 -6.2 -5.27335 | opp_overlap 758859 CTCTTTAAATAAAAA TTGGAA TAGT TTCCAA TTCTCCTGCTCTTTC TERM 829 758911 - 758922 + g 74 -5.8 -4.51799 | opp_overlap 758911 GTGACTTCTATGATA CGAG AATC CTCG TTTTCTACATTTAAT TPASS_0691 760149 - 759391 - | hypothetical protein TERM 830 759472 - 759460 - G 71 -2 -5.01732 | AATCGGGCCAAAAAA TTCA GGCTG TGAA ATATGCACAAGATGC TERM 831 759744 - 759754 + g 77 -3.2 -5.08824 | CTGGAGACAAAAACA GATG CTG CGTC TTTTTTCGCTCAACG TERM 832 759972 - 759955 - G 70 -7 -4.09864 | AGCCATTGCGTAAAA CTCCGT CAGACC ACGGAG ATCGGGCGAGACGGT recA 761400 - 760177 - | protein RecA TERM 833 760599 - 760559 - G 95 -9.2 -4.97402 | gap 2 GAAAAGGCAGAAAAA CCCTTCC-CAAAG-AGAATC TCC GTTTCTACCTTGCGGAAGGG GGGTGCCATCTTATT TERM 834 761439 - 761421 - R 81 -6.6 -4.72272 | overlap 761422 GCCTCCCATGAAAAA CCCCGCGC AAG GCGCAAGA GACGCGCTACCACCT TPASS_0693 762983 - 761661 - | hypothetical protein TERM 835 762029 - 762008 - G 77 -8.6 -4.09864 | opp_overlap 762023 ACCGACGCTTCAAAA GCCCCCCG AGCAAA CGGGTGGC CGTCAGATTCTCGTG TERM 836 762675 - 762659 - G 78 -12.3 -2.87132 | TGTCCCCCGTACAGA GCGCATC CGT GATGCGC ATACCCTCTTCTGTG TERM 837 762866 - 762851 - G 72 -7.6 -3.99324 | CCGCAGCATGAGAAA CATGCT CAGA AGCATG GGCCACACCCGAAGA TPASS_0694 763143 - 763820 + | possible 5,10-methenyltetrahydrofolate synthetase TERM 838 764076 - 764111 + G 70 -10.3 -3.1332 | gap 1 GATAGCGCCGCGCTC GTCGCTCACGCGCGCG CAATT CGCGCGCGMC-GCGGC TTGGATGCTGTGTTC TERM 839 765369 - 765315 - g 81 -7.2 -4.71426 | gap 1, opp_overlap 765327 765340 765342 TTTCTAGCAAGAAAA CGCAGCGCAGAATCAGCGGCCAG CCCAGCGCTC CAGGACGCTGATTCTGAG-TACG CAGCGTCTGCATCAC TPASS_0695 763908 - 765701 + | possible phosphoribosylglycinamide formyltransferase TPASS_0696 766525 - 765689 - | possible nicotinamidase TERM 840 766015 - 765982 - G 77 -3.2 -5.06816 | AGCGCTTAACAAAAA GAGAATCC-GCAGTCC CTTG AGAC-GCTGGATACTC CGAGGACAGCACACT TERM 841 766553 - 766532 - R 72 -11.5 -3.12351 | overlap 766545 TCTGCTCATAGGGAA GCGCGCGCA GGAA CGCGCACGC GCGTGCGCGCATACC TERM 842 766562 - 766545 - R 81 -12.7 -3.14463 | overlap 766532 AAGCGCGCGCAGGAA CGCGCAC GCGC GTGCGCG CATACCCCACCCCAG TPASS_0697 767195 - 766587 - | hypothetical protein TERM 843 767126 - 767105 - G 82 -2.2 -5.38054 | gap 1, overlap 767106 GGGGAGAAACAAAAA CCTG-CGCG GCGTT CGCGTCAGT GCAAAGACCCCACAA TPASS_0698 767771 - 767226 - | hypothetical protein TPASS_0699 767878 - 767768 - | hypothetical protein TPASS_0700 768276 - 767884 - | hypothetical protein TERM 844 768004 - 767988 - G 100 -7.9 -5.24129 | opp_overlap 767986 767993 GCTTCTGAGAAAAAA GCTCTGC GGC GCGGAGC AGTGTCTCCTGCCGC TPASS_0701 768617 - 768414 - | possible DNA-directed RNA polymerase TPASS_0702 769323 - 768787 - | hypothetical protein TPASS_0703 770018 - 769338 - | hypothetical protein TERM 845 769755 - 769741 - G 82 -2.1 -5.33405 | gap 1 GCCACTAAAGAAAAA GTG-GC CATC GCACAC GCACCTTGGGATACC recJ 772138 - 770018 - | single-stranded-DNA-specific exonuclease TERM 846 770841 - 770831 - G 75 -5.4 -4.72272 | opp_overlap 770840, overlap 770834 TTCGCGCATTAAAAA CAGT TCC ACTG CACGGTGCGGACACC TERM 847 771252 - 771233 - G 95 -9.2 -5.02476 | overlap 771234 ACATTGGGGAAAAAA CGCGGCCA TACG CGGCCGCA CATCGGTAAAACGCC TERM 848 771251 - 771234 - G 81 -10.5 -3.60762 | overlap 771233 CATTGGGGAAAAAAC GCGGCCA TACG CGGCCGC ACATCGGTAAAACGC TERM 849 771353 - 771334 - G 81 -8.6 -4.35116 | CATCCCATACGAAAA CTTCCTGA CCCT CCAGGAAG GCACCAAGACGCGTA TERM 850 772028 - 772012 - G 77 -3 -5.0925 | gap 1, overlap 772015 GCTCAAAATGAAAAA GGAGTGC GTCA GCA-TCC ACTACCTTGCGACGC pbp2 774935 - 772281 - | penicillin-binding protein TERM 851 772312 - 772332 + g 74 -11.1 -3.25896 | opp_overlap 772312, overlap 772310 AGACTCTGCACACCA CGAGCAGGA TCG TCCTGCACG TCTTCTGACTCCTCC TERM 852 772433 - 772409 - G 84 -7.7 -4.72272 | opp_overlap 772394, overlap 772410 GCGGCGCATCAAAAA GCGGCGCTTCC TGC GGATGCACCGG CGCAAAAGGATTGCT TERM 853 772432 - 772410 - G 78 -11.2 -3.43042 | opp_overlap 772394, overlap 772409 CGGCGCATCAAAAAG CGGCGCTTCC TGC GGATGCACCG GCGCAAAAGGATTGC TERM 854 772643 - 772632 - G 70 -3.6 -4.71828 | overlap 772633 772634 ATGGTACGAACAAAA GCGC TCAG GCAC CGTGCCAGGCAAAAA TERM 855 773826 - 773842 + g 71 -2.9 -4.7629 | overlap 773828 GGGACTGAGCGTACT GCGGT AATACGC GCCGC TTTTTGCCTTCATGC TERM 856 774360 - 774339 - G 88 -11.5 -3.71308 | opp_overlap 774341, overlap 774335 AAGCAAAATAACCAA GAGCGCCGC CTCT GCTGCGCTC ATCTGACGTACCGAA TERM 857 774407 - 774384 - G 93 -13.2 -3.61268 | overlap 774391 TACCGAATGGCCAAA GTAGAAGCGG GCAG CCGCTCCTAC GCCGTAGGTGCCGCC TERM 858 775058 - 775037 - R 100 -12.3 -5.07275 | GCAGACACACAAAAA GGCCGGCTT TCTC AAACCGGCC CCACTACGTACCGAC TPASS_0706 776158 - 775232 - | hypothetical protein TERM 859 775472 - 775453 - G 71 -10.8 -2.87931 | overlap 775455 CGTACTTGCCATACA GACGATTG TACG CAATCGTC GCCACCTGTCCGCTC TERM 860 775552 - 775566 + g 78 -8.5 -4.18018 | opp_overlap 775549 GATGATAACTCAGCC GCCCG GTGAA CGGGC TTTTGCGTGCGCCAA TPASS_0707 776699 - 776220 - | hypothetical protein TERM 861 776827 - 776848 + G 83 -6.5 -4.91712 | opp_overlap 776822, overlap 776830 776831 CTTGAAGGTACCTGC GATTGCAGC TGGC GCTGCGTTC TTTTTATCCATTGCA TERM 862 776830 - 776845 + G 77 -6.8 -4.55383 | opp_overlap 776822, overlap 776827 776831 GAAGGTACCTGCGAT TGCAGC TGGC GCTGCG TTCTTTTTATCCATT TPASS_0708 776765 - 777280 + | hypothetical protein TPASS_0709 777336 - 778124 + | RNA polymerase sigma-28 factor TERM 863 778351 - 778339 - g 85 -3.3 -5.40072 | CTTCCGCCAAAAAAA GTGGA AAA TCCGC GCCTACGAGAGCTCT TERM 864 778505 - 778478 - g 76 -4.2 -5.02074 | gap 1, overlap 778481 778497 778500 778501 GTACTTTGCAAAAAA GAG-GGCGTTTTT TTA AAAATCACCGCTC CCCTCGGTAAAGGGC TERM 865 779267 - 779247 - g 85 -8.3 -4.56775 | opp_overlap 779234 779250, overlap 779250 ACGTCTCTGTAAAAA CAGGGAACA TTA TGTTCCTTG GTACCGTGTTGGTAC TPASS_0710 778133 - 780103 + | hypothetical protein TPASS_0711 780140 - 780712 + | hypothetical protein ylxH1 781641 - 780727 - | ATP-binding protein flhF 782926 - 781613 - | flagellar-associated GTP-binding protein TERM 866 782337 - 782347 + gr 73 -5.4 -4.57073 | ATCCATCGCAGGACT GTTG ATT CAAC TTTTTCGAAAGACTC TERM 867 782468 - 782449 - GR 70 -5.8 -4.17048 | gap 1, overlap 782450 TTTCCTCTAAAAGAA GTTCGATTC TTT GAATCG-AC TGCAACTCCTGTGCT TERM 868 782790 - 782779 - GR 100 -4.4 -6.30182 | TGACAGAAAAAAAAA TCTC TACC GAGA CTCGTTCTATGAGAC flhA 785084 - 782961 - | flagellar biosynthesis protein TERM 869 783181 - 783170 - G 86 -5.8 -5.06414 | GTGTGGGAACAAAAA CGGT GCGG ACCG CTTGCAGAACTTGTC TERM 870 784328 - 784315 - G 71 -3.1 -4.79352 | overlap 784316 784317 CGAGTGACAATAAAA CCTGT TGCA ACAGA CAACAACAAAGAAGG TERM 871 784922 - 784903 - G 77 -2.9 -5.14985 | opp_overlap 784895, overlap 784895 784897 784905 GGAAATACAGAAAAA TCTGTTG GTTTTT CAACAAA TAACACCATAAGTAA TERM 872 785082 - 785064 - G 70 -3.7 -4.68593 | GTCAGTAGTGAAAAA GGCACTC TTACC GTGCGCC ATAGTATGGGTTACC flhB 786223 - 785093 - | flagellar biosynthetic protein TERM 873 785184 - 785221 + g 79 -4.8 -4.94168 | gap 1, opp_overlap 785194, overlap 785191 TAGGGAACTTCTCTC CCGATAGCAACCTGCGT GTACA ACGCACGT-GCAAGCGG TTTGTTTTCTTCTAT TERM 874 785191 - 785225 + g 71 -2.8 -4.84311 | opp_overlap 785194, overlap 785184 CTTCTCTCCCGATAG CAACCTGCGTGTAC AACGCAC GTGCAAGCGGTTTG TTTTCTTCTATCAAG TERM 875 785450 - 785470 + g 70 -6.1 -4.24326 | AACATAACTTCTCAC GAGCGGG TCCCCTT CCTGCTC TTTTAACTCCTCTTT TERM 876 785955 - 785936 - G 100 -12.2 -5.59879 | CACAAATACAAAAAA CCATCCAG TATT CTGGATGG ACGCGGTAGTAGCAC fliR 787017 - 786220 - | flagellar biosynthetic protein TERM 877 786579 - 786591 + g 81 -6.3 -4.86731 | opp_overlap 786577 786579, overlap 786568 CGCCTCCTAAAAACA GGATT TGA AATCC TTTTATTTGCAAAAA fliQ 787314 - 787030 - | flagellar biosynthetic protein fliP 788148 - 787333 - | flagellar biosynthetic protein TERM 878 788135 - 788113 - G 93 -8.3 -4.84274 | overlap 788115 CAATGACACGAAAAA GAGCGCGCG GCGTA CGCACGCAC GAGCACGGATCACAA TERM 879 788133 - 788115 - G 81 -9.5 -4.02905 | overlap 788113 ATGACACGAAAAAGA GCGCGCG GCGTA CGCACGC ACGAGCACGGATCAC TPASS_0719 788933 - 788145 - | hypothetical protein TERM 880 788452 - 788415 - GR 76 -7.6 -4.1891 | CGCTGCCAATACAAA GGCGCGCTCTGCAAGT CCTACC ACGTACACTGCGCGCC CTGGCGCAATGGGCA TERM 881 788537 - 788518 - GR 77 -12.2 -2.82776 | overlap 788510 788515 CTAGAAAGAAACGCA CTGCGTCT GATA AGACGCAG AAACCCGTATACAGC fliY 789915 - 788869 - | flagellar motor switch protein TERM 882 789379 - 789363 - GR 74 -4.3 -4.70659 | overlap 789365 CCGTATAGGTAAAAA CGCACAG ACG CTGCGGG GGAAAGCGAACCATC TERM 883 789846 - 789824 - GR 78 -9 -3.89346 | CCCCCACCGGAGAAA GACGCGCCCG CAG CGGGGGAGTC GCCGGCTCCCATCTC fliM 790942 - 789908 - | flagellar motor switch protein fliL 791512 - 790964 - | flagellar protein TPASS_0723 791625 - 791491 - | hypothetical protein motB 792338 - 791622 - | flagellar motor rotation protein TERM 884 791915 - 791901 - G 76 -4.2 -5.01497 | overlap 791902 ATGATCAGACAAAAA CTGCGC AAC ACGCAA CAACGCCTCCCGAGA TERM 885 792019 - 792031 + g 72 -6.3 -4.34402 | TCATCACTGGTCACC GCAAT CTT ATTGC TTTTAATCTCAGGAG motA 793123 - 792344 - | flagellar motor rotation protein flbD 793336 - 793139 - | flagellar protein flgE 794785 - 793394 - | flagellar hook protein flgD 795317 - 794856 - | flagellar hook assembly scaffolding protein TERM 886 795112 - 795096 - G 76 -8 -4.2828 | opp_overlap 795108 CTCGAGCGAGGAAAA TTGCGC CATTT GCGCAA TAAACTGCGTGTCCT tap1 797036 - 795393 - | treponemal aqueous protein TERM 887 797105 - 797094 - gH 79 -2.2 -5.24531 | opp_overlap 797098 ACGTCTTAGAAAAAA GACC TGCC AGTC CGGTTCGGACGCATC TPASS_0730 797005 - 798102 + | hypothetical protein TERM 888 798282 - 798266 - g 100 -13.7 -3.6682 | opp_overlap 798260 798268 798269 TGGGAGGTACGGAAA CGGCACG AGG CGTGCCG CCTGCGCGTTTTTCA TERM 889 798269 - 798290 + G 77 -6.5 -4.62069 | gap 1, opp_overlap 798266, overlap 798260 798268 GAGGTACGGAAACGG CACG-AGGCG TGC CGCCTGCGCG TTTTTCACGTGCAAG TPASS_0731 798122 - 798832 + | hypothetical protein folD 799744 - 798797 - | methylenetetrahydrofolate dehydrogenase TERM 890 799104 - 799082 - G 72 -8.3 -3.85698 | opp_overlap 799083, overlap 799063 799083 GCCGGTGCGCACAAA CGGCGCGCC AATGA AGCGCGCCT TTCCCAGTGCTGCAA TERM 891 799083 - 799103 + g 81 -11.1 -3.58343 | opp_overlap 799063 799082 799083 CCGGTGCGCACAAAC GGCGCGC CAATGAA GCGCGCC TTTCCCAGTGCTGCA TERM 892 799103 - 799083 - G 75 -11.8 -2.91276 | opp_overlap 799083, overlap 799063 799082 CCGGTGCGCACAAAC GGCGCGCC AATGA AGCGCGCC TTTCCCAGTGCTGCA TERM 893 799328 - 799309 - G 72 -10 -3.37464 | GGAGCAAGTGCACAA TCCCCGCA GGGG TGCAGGGA ACAAACCCAGGCTGC TERM 894 799695 - 799714 + g 85 -10 -4.22214 | opp_overlap 799692 CGCGTTGCAAGACGC GCCGTACA CTCG TGTGCGGC TTGTTTTCCATCGAT TERM 895 800125 - 800136 + G 72 -5.8 -4.34482 | GGCGGGGGGTTTCAC CTCG GGTA CGAG TATTTTTTTACCAAA TPASS_0733 799840 - 800499 + | hypothetical protein deoD 801233 - 800532 - | purine nucleoside phosphorylase TERM 896 800592 - 800577 - G 74 -10.4 -3.54741 | opp_overlap 800570, overlap 800580 TATCATTTGGGTAAA GGAGCG CTCC CGCTCC TGCGCGCTAGTTACC TERM 897 800961 - 800982 + g 74 -8 -4.08216 | CTCCTGCAATCCACC GGCAGTCC CCACGC GGATTGCC TTTTGCACCCCATAA TERM 898 801158 - 801142 - G 85 -2.9 -5.42259 | overlap 801157 GCATTGTGAAAAAAA CGCTCCG CCA CAAAACG CGCACGCAGCGGGTC gltA 802871 - 801315 - | glutamate synthase TERM 899 801704 - 801693 - G 79 -4.4 -4.96848 | GGTCTGACACAAAAA GTGA AACG TCAC CCCCTCATCTTCTGC hydG 803716 - 802874 - | hydrogenase, gamma chain TERM 900 803904 - 803894 - H 83 -8.2 -4.43477 | overlap 803896 CTCATTCAAGCAAAA CGCC ATC GGCG CCGAGAAGGGTCCGA TERM 901 805134 - 805144 + G 75 -5.4 -4.64657 | overlap 805141 GCAAAACACACCCCA CAGA GCC TCTG TTTTTCCAGATTTCG msmE 803950 - 805260 + | sugar ABC transporter, periplasmic binding protein TPASS_0738 805641 - 805306 - | hypothetical protein TERM 902 805371 - 805354 - G 81 -8.3 -4.4009 | overlap 805355 GTCGAGGTCATAAAA GGCGCGC GCCT GCGCGCT CATAAGATGAACCAG TERM 903 805370 - 805355 - G 77 -11.8 -3.23733 | overlap 805354 TCGAGGTCATAAAAG GCGCGC GCCT GCGCGC TCATAAGATGAACCA TERM 904 805481 - 805465 - G 73 -9.4 -3.59979 | overlap 805469 TTCTCTTAGGCCAAA GCGAGC CGCCT GCTCGC ACACCAGACGATGAG TPASS_0739 806834 - 805638 - | hypothetical protein TERM 905 806242 - 806252 + g 70 -5.4 -4.36903 | opp_overlap 806242 ACACTACGCAACAAA GCTA AAA TAGC TTTCTGTTTCCTCGA TERM 906 806489 - 806476 - G 77 -3.1 -5.02502 | opp_overlap 806481 CACACTACAGAAAAA GGAAC GTTA ATTCC CGTTAACTTTTCTAC TPASS_0740 807474 - 806908 - | hypothetical protein TERM 907 807489 - 807450 - G 78 -10.6 -3.54543 | opp_overlap 807476 ACCTAGGTGGCGAAA GCACTGCGCGCGCGTACG CGTC CACACGCGCAATCAGCGC CGTCATATCTGCAGA TPASS_0741 808216 - 807602 - | hypothetical protein TERM 908 808141 - 808115 - G 72 -8 -3.93583 | gap 1, opp_overlap 808131 GAAGGTAGGCACAAA CAGCACG-CGG TCATAC CCGGCGTGCCG GTGTACTGCATCAGC obg 809343 - 808213 - | GTP-binding protein rpmA 809724 - 809461 - | ribosomal protein L27 TPASS_0744 810081 - 809755 - | hypothetical protein rplU 810411 - 810094 - | ribosomal protein L21 TPASS_0746 813223 - 810518 - | pyruvate, phosphate dikinase TERM 909 810942 - 810926 - G 100 -10.1 -5.04325 | opp_overlap 810926, overlap 810927 CCCAAACGAGAAAAA CTGCGCG TAG CGCGCAA TCTCGTCTGCACTCA TERM 910 810941 - 810927 - G 85 -11.4 -3.6151 | opp_overlap 810926, overlap 810926 CCAAACGAGAAAAAC TGCGCG TAG CGCGCA ATCTCGTCTGCACTC TERM 911 812005 - 811985 - G 75 -11.3 -2.91264 | opp_overlap 811988, overlap 811988 CGTTGCAGGCATACA CAAGATACA CCG TGTATCTTG TCCGCCCATCTTCGC TPASS_0747 814267 - 813233 - | hypothetical protein TERM 912 814322 - 814293 - R 100 -12.2 -4.77036 | TTTGATGATTAAAAA GCTCCCCGAAAC AGAAAA GTTCCAGGGAGC TTCGGATCACGACAA cfpA 816392 - 814356 - | cytoplasmic filament protein A TPASS_0749 816591 - 816370 - | hypothetical protein TPASS_0750 816561 - 817232 + | hypothetical protein TPASS_0751 817269 - 817982 + | hypothetical protein/laminin-binding protein TPASS_0752 819262 - 818120 - | hypothetical protein TERM 913 818192 - 818174 - G 76 -8.1 -4.24342 | TCGGTGACCAACAAA GCCGGAA TCATC CTCCGGC ACAAAAACTTGGTAG TERM 914 819228 - 819206 - G 95 -6.8 -5.29445 | opp_overlap 819227, overlap 819207 819209 GTGGAAGAAGAAAAA GGACGCGCAC ACC GCGCGCGACA GCACCATGCGCTGTG TERM 915 819227 - 819207 - G 79 -10.3 -3.76582 | overlap 819206 819209 TGGAAGAAGAAAAAG GACGCGCAC ACC GCGCGCGAC AGCACCATGCGCTGT TERM 916 819225 - 819209 - G 82 -11.5 -3.44752 | overlap 819207 819206 GAAGAAGAAAAAGGA CGCGCAC ACC GCGCGCG ACAGCACCATGCGCT TPASS_0753 819627 - 819343 - | hypothetical protein TPASS_0754 820994 - 819624 - | hypothetical protein TERM 917 819986 - 819970 - G 75 -5.1 -4.61868 | TAGTGATACATAAAA GCGGAAT CAA ACTCCAC CTCCCGCATGAGATC TERM 918 820604 - 820573 - G 87 -4.4 -5.2166 | gap 1, overlap 820586 GAAGAAGCGAAAAAA CGATACCCAGAGACA GGA TG-CTCCCGGTAACG CTCGGAGATAAACTC ptsN2 821578 - 821036 - | PTS system, nitrogen regulatory IIA component TERM 919 821212 - 821197 - G 74 -3.3 -4.98255 | CGGCAATCATAAAAA CAAGA TGTACG TCTTG TCCGTCAAGAGGACC TERM 920 821426 - 821416 - G 70 -6.8 -4.10331 | overlap 821425 TCAAGCAATCAGAAA GCTC ATA GAGC GCCGGACGACGCTCA fmt 822737 - 821778 - | methionyl-tRNA formyltransferase TERM 921 822465 - 822449 - G 70 -3.7 -4.60041 | overlap 822451 ACCGAGGGCCAAAAA TCTTACC GTA GGCAAAA CACACCAGCACGTCC def 823229 - 822741 - | polypeptide deformylase TERM 922 822845 - 822821 - G 88 -2.1 -5.47218 | TGCGATCCAAAAAAA GAATACCGTCA AGA TGATCGTACTC GTGCTGGATCACTCT rpsU 823479 - 823270 - | ribosomal protein S21 TERM 923 823417 - 823429 + g 71 -9.1 -3.42379 | TTCCTTCTCCACCTG GCGCT TGA AGCGC TTAATTGCCTTCTCT TERM 924 823525 - 823500 - H 100 -10.5 -5.40072 | gap 1, overlap 823502 823504 CTCCCCTGAAAAAAA CAC-AGCCTACC AGG GGTAGGCTAGCG CAAAAGACGTCCCCT TERM 925 823522 - 823502 - H 93 -11.9 -4.34482 | overlap 823500 823504 CCCCTGAAAAAAACA CAGCCTACC AGG GGTAGGCTA GCGCAAAAGACGTCC TERM 926 823520 - 823504 - H 86 -12.3 -3.76885 | overlap 823502 823500 CCTGAAAAAAACACA GCCTACC AGG GGTAGGC TAGCGCAAAAGACGT TPASS_0759 823598 - 823717 + | hypothetical protein pbp3 823674 - 825632 + | penicillin-binding protein TERM 927 825649 - 825636 - g 86 -3.7 -5.34381 | opp_overlap 825636 AAACTCAAATAAAAA GCGAG ATCC CGCGC GTTTCCCGGCCGGTG TERM 928 826407 - 826353 - g 95 -7.1 -5.36965 | gap 1, opp_overlap 826355 CAACACTATAAAAAA TGCCGCACAGCTGTGTGTGCGCAC GCCCGTAA ATGCGCTG-CGCAACTGCGCGGCA GGGAGTACTGCACTC TPASS_0761 825613 - 826491 + | hypothetical protein TPASS_0762 826520 - 827701 + | hypothetical protein TERM 929 827727 - 827760 + TF 74 -10.9 -3.53012 | gap 1, overlap 827727 827739 CACTCAAAGACGTGT GTGGG-GCGCAGGGGC AGG GCCCGTGCGTTCCCCC TTTCAGGGAAAGAGC TERM 930 827727 - 827759 + TF 79 -13.3 -2.71712 | overlap 827727 827739 CACTCAAAGACGTGT GTGGGGCGCAGGGGC AGG GCCCGTGCGTTCCCC CTTTCAGGGAAAGAG TPASS_0763 828704 - 827763 - | hypothetical protein TERM 931 828584 - 828572 - Gf 70 -4.1 -4.59773 | GTGCACCGTTAAAAA GCACT ACT AATGC TTTGATCTTCATGGG TERM 932 828613 - 828638 + gF 74 -10.3 -3.46602 | GGAAATCTCCTATAC TGCCTCCCCGC CTGT GCGGGGCGCCA TTCTACTATGGGGGC TERM 933 829548 - 829529 - gR 77 -3.4 -5.04222 | CAAGGAAATGAAAAA CGCCGCTG AGGG CATCGTCG ACCTTGTGCGTAACG TPASS_0764 828663 - 829838 + | hypothetical protein TERM 934 829831 - 829883 + Tr 76 -3.2 -5.02476 | gap 1, opp_overlap 829827, overlap 829817 829848 TCCTTCAGGAAGGTG GCGACTGACCCTGC-GCAGGGGCAG ATGC CCCTTCCTGCTGCTGGCTTAGACGC TTTTTTAGCCCCTCT ftsH 831649 - 829820 - | cell division protein TERM 935 830992 - 830979 - G 76 -8.1 -4.15044 | GCTTGTTTGAATAAA TCGCG CACA CGCGA GGCGCCAATCCCCAC TERM 936 831545 - 831525 - G 91 -11.8 -4.09215 | overlap 831537 831538 GAGAGCAACGAGAAA CCCCGCGC AGAAG GCGCAGGG CGCGCGGAAGTGTAC TERM 937 831744 - 831769 + H 87 -8.3 -4.56597 | gap 1, overlap 831722 GAATTTCTGCGCGGA GGTCTTTCG-CG TGA CGACGAAGGGCC TTTTTGAGGGCGGGG TERM 938 832032 - 831996 - H 84 -2.8 -5.40072 | GGTGCTGCAAAAAAA CACACGCGCGCGGCTA TTGCT TACCCTCATGCGCGCG TTCACCGAAACTTCA TERM 939 832077 - 832093 + G 74 -7.9 -4.03234 | overlap 832078 CCTATCACCCGTACC CGGGCGA CAA TCGCCCC TTTCTATACGCCGCG TERM 940 832078 - 832092 + G 75 -11.4 -3.01726 | overlap 832077 CTATCACCCGTACCC GGGCGA CAA TCGCCC CTTTCTATACGCCGC TERM 941 832231 - 832244 + G 71 -2.3 -4.98255 | CATTGGTGCACGCAC GCGTG GGGA CACCC TTTTTATCCTTGCCG TPASS_0766 832052 - 832933 + | hypothetical protein TERM 942 833034 - 833063 + F 72 -12.1 -2.85351 | gap 1, opp_overlap 833016, overlap 833044 833049 833050 GGCGCCCGTCTTCCC CGCGGTGGC-GGGC TGC GCCCTGCTACCCCG TCTGCTGTGGAGCGG TERM 943 833044 - 833087 + F 70 -2.8 -4.7254 | overlap 833034 833049 833050 TTCCCCGCGGTGGCG GGCTGCGCCCTGCTACCCCG TCTG CTGTGGAGCGGGGCCTTGTC TTTTTCCTGAGGGCT TERM 944 833792 - 833802 + G 71 -3.2 -4.77173 | CGGGATGAACTCATC GATG CGG CGTC TTTGTTTTCTGACGA TERM 945 834645 - 834633 - g 72 -6.2 -4.38116 | CCCACAAAAAGCAAA CCGG CGGTT CCGG GCAGTTCGGGCGTGT fusA2 833144 - 835231 + | translation elongation factor G TERM 946 836174 - 836148 - g 70 -4.4 -4.58395 | TGCAGTCTGCAAAAA CAAAGCAAAAGG CGT CCTCTGACCTTG CGCGGAGTGCGGATA tmpA 835370 - 836407 + | membrane protein tmpB 836404 - 837381 + | outer membrane protein TERM 947 837461 - 837507 + G 81 -4.3 -5.03994 | gap 1, opp_overlap 837460 837462 837463, overlap 837469 AGCCCATAGAGAAAG AGCTCCCAGAGCGCTGGAACGC TACG GTG-TCCAGCGCTCTTTGTGTG TTTTTGTCTCTACAA TERM 948 837469 - 837499 + G 100 -14.1 -4.40232 | gap 1, opp_overlap 837462 837460 837463, overlap 837461 GAGAAAGAGCTCCCA GAGCGCTGGAACGC TACG GTG-TCCAGCGCTC TTTGTGTGTTTTTGT TERM 949 837733 - 837718 - g 77 -6 -4.62069 | overlap 837719 CCGGGACTGGAAAAA CGGCCG CCTT CGGCCT CCCCCTTATCCAAGA TERM 950 838094 - 838083 - g 74 -5.8 -4.46112 | opp_overlap 838079 838077 838083, overlap 838079 TCTCATGCAAATAAA GACG CACG CGTC CTTATGTTTTCTGCC TERM 951 838247 - 838260 + G 76 -9.5 -3.7732 | opp_overlap 838247 838244 838243 CGCTGACAAAATCGA GGCGC TTGT GCGCC TTATTGATGTGAGCG TPASS_0770 837426 - 839375 + | ATP-dependent RNA helicase TPASS_0771 841177 - 839396 - | hypothetical integral membrane protein TPASS_0772 841181 - 842005 + | hypothetical protein htrA1 843241 - 842045 - | periplasmic serine protease DO TERM 952 843352 - 843323 - H 100 -17.1 -3.09327 | opp_overlap 843326 843338 CCAGCTGAGCTAATA GCCCACGGCGCCA CGCG CAGCGCCGCGGGC AGCGTGTATTGGAAT mgtC 843586 - 844260 + | Mg2+ transport protein nth 844340 - 844975 + | endonuclease III TPASS_0776 845828 - 845052 - | hypothetical protein TERM 953 845236 - 845224 - G 72 -10.5 -3.06315 | GCAAGATTCTCAACA CGCGC AGC GCGCG ACAATGTTTTCTGCG TERM 954 845734 - 845715 - G 73 -11.4 -2.60238 | overlap 845710 845714 ACAGCACAGAGGAAC CGTCCCAG TACA CCGGGACG CACAAAAAACACAGC TERM 955 845832 - 845822 - G 82 -3.2 -5.24129 | TCGCGCGAGAAAAAA GGAT CAC ACCC CTACGTCCYTACCTC TPASS_0777 846105 - 845881 - | hypothetical protein mazG 847085 - 846174 - | protein MazG TERM 956 846271 - 846213 - G 86 -6.5 -5.14563 | gap 2, opp_overlap 846213 846214 846252, overlap 846215 GTGTCGAGTAAAAAA CA-GTCGC-CGTGACCGTGCGCGCCTGCG CAC CGCAGACGCCCGCGTGCGTGCGCGACGTG GTTTATGGCACGCGC TERM 957 846213 - 846271 + g 71 -10.9 -2.91276 | gap 2, opp_overlap 846213 846215, overlap 846214 846252 GTGTCGAGTAAAAAA CA-GTCGC-CGTGACCGTGCGCGCCTGCG CAC CGCAGACGCCCGCGTGCGTGCGCGACGTG GTTTATGGCACGCGC TERM 958 846268 - 846215 - G 82 -9.3 -4.20707 | gap 1, opp_overlap 846214 846213 846252, overlap 846213 GTCGAGTAAAAAACA GTCGC-CGTGACCGTGCGCGCCTGCG CAC CGCAGACGCCCGCGTGCGTGCGCGAC GTGGTTTATGGCACG TERM 959 846573 - 846560 - G 84 -3.7 -5.24129 | opp_overlap 846562, overlap 846562 GTGTTGGACAAAAAA GACGC GCAC GCGAC GCGTTTTTTTGCATT TERM 960 846562 - 846576 + g 100 -4.2 -5.61824 | opp_overlap 846560 846562 GTTGGACAAAAAAGA CGCG CACGCGA CGCG TTTTTTTGCATTTTG TERM 961 846638 - 846614 - G 74 -10.7 -3.17212 | GCATGAGGGGAGGAA CCGTTCGAGGA ATG CCCTCTAACGG AGAAGCTGCACGGCG dedA 847726 - 847082 - | protein DedA TERM 962 847728 - 847714 - G 93 -3.5 -5.52096 | AAACCCAAGAAAAAA GCGTA TGCAC CACGC CCTACGCACCTCCAT nadE 849812 - 847773 - | NH(3)-dependent NAD(+) synthetase TERM 963 847965 - 847940 - G 100 -9 -5.75945 | overlap 847942 AGCGGGTAAAAAAAA CGCGCAGC GCTGCACATA GCTGCGCG CAAGAATACGCAKTT TERM 964 848026 - 848009 - G 71 -2.7 -4.8048 | CGGCCACACGAAAAA GTTTTCG AGGA CCAAAAC CGTTCACCGTTATGT TERM 965 848789 - 848770 - G 71 -2.1 -5.00616 | GTTCTTTGCAAAAAA CCGTC CTGCGTGTCT GACGG TGCAGAAACAGCGAG TPASS_0781 850310 - 849849 - | hypothetical protein TPASS_0782 850799 - 850356 - | hypothetical protein TPASS_0783 851961 - 850828 - | hypothetical protein TERM 966 852554 - 852583 + G 72 -11.5 -2.52623 | gap 1, overlap 852553 852552 CAAGCGATCACTTCT CCCCTGTTCGCATC AGC GATGC-ATCAGGGG CTGTTGTCACCGGGG TPASS_0784 852127 - 852726 + | hypothetical protein TERM 967 853132 - 853121 - g 71 -2.2 -4.94487 | TGACAAAAGAGAAAA CGTA ATGG CACG TGCAGAGCGCATAGT TPASS_0785 852723 - 853409 + | hypothetical protein TPASS_0786 853541 - 854254 + | possible ABC transporter, ATP-binding protein TPASS_0787 854720 - 854301 - | hypothetical protein TERM 968 855379 - 855357 - g 71 -3.4 -4.74103 | overlap 855342 855336 CGCGCAATCGAAAAA GAAATTCCCC ACT GCGCAATTTC AGAGGTGGTGCTTTC TERM 969 855540 - 855557 + G 74 -2.7 -5.02074 | opp_overlap 855524 855537, overlap 855539 855537 855536 TTTGAAATGCAACGC CTCAC AAAGTGGG GTGAG TTTTTTCAGCGCTAC TPASS_0788 854802 - 855692 + | hypothetical protein TPASS_0789 856481 - 855705 - | hypothetical protein TERM 970 856261 - 856251 - G 80 -5.4 -5.00642 | opp_overlap 856251 856249 856239 CAACGGAGACAAAAA CTCT ATA AGAG TCTTTTGCTCTCCAC TPASS_0790 859166 - 856500 - | possible antibiotic transport protein TERM 971 858121 - 858109 - G 71 -3.3 -4.82548 | CAAAAAGATACAAAA CCAAC GAA GGTGG TAAGTGCAGACAAAA TERM 972 859060 - 859047 - G 79 -3.7 -5.0538 | CTGGACTGCAAAAAA GAGCG TCAG CGCGC TAAGCACCGCAACAA TPASS_0791 859554 - 859309 - | hypothetical protein flaB2 859540 - 860400 + | flagellar filament 33 kDa core protein TERM 973 860417 - 860445 + FH 100 -18.9 -3.30338 | opp_overlap 860421, overlap 860421 860443 TCTTCTCACCGCTTC GAAAGGCCGGCGC TGC GCGCCAGCCTTTC TTCTAAAGAGCTTGT TERM 974 860441 - 860421 - fH 100 -16.1 -3.53811 | opp_overlap 860417 860421 CTCACCGCTTCGAAA GGCCGGCGC TGC GCGCCAGCC TTTCTTCTAAAGAGC TERM 975 860421 - 860441 + FH 100 -13.9 -4.30719 | opp_overlap 860421, overlap 860417 CTCACCGCTTCGAAA GGCCGGCGC TGC GCGCCAGCC TTTCTTCTAAAGAGC TERM 976 861699 - 861648 - g 82 -9.4 -4.25053 | gap 1, overlap 861645 861649 TCACAACACAAAGAA CGTCCGCACGTGCAGTTCCCGTGCA TCA CGCACAGGAAC-ACACGCGGAGGCA AGACATTCCGATATC TERM 977 861698 - 861649 - g 74 -10.7 -3.13947 | gap 1, overlap 861645 861648 CACAACACAAAGAAC GTCCGCACGTGCAGTTCCCGTGCA TCA CGCACAGGAAC-ACACGCGGAGGC AAGACATTCCGATAT TPASS_0793 860479 - 862098 + | hypothetical protein metK 863325 - 862135 - | S-adenosylmethionine synthetase TPASS_0795 863379 - 863537 + | hypothetical protein TPASS_0796 864614 - 863526 - | hypothetical protein TERM 978 864706 - 864650 - R 95 -3 -5.82316 | gap 2, opp_overlap 864694, overlap 864653 864657 864684 864688 AGCAGTCAAAAAAAA CAAGCAATGCACCCTGC-C-CACCCCTT AGG AAGAACTGAGCGCAGCGCGCACCGCGTG TATAACTGCACGGCG TERM 979 864696 - 864653 - R 75 -3.6 -4.97383 | opp_overlap 864694, overlap 864650 864657 864684 864688 AGTCAAAAAAAACAA GCAATGCACCCTGCCCACCC CTTA GGAAGAACTGAGCGCAGCGC GCACCGCGTGTATAA proC 865465 - 864674 - | 1-pyrroline-5-carboxylate reductase metG 867951 - 865516 - | methionyl-tRNA synthetase TERM 980 865963 - 865941 - G 81 -4.9 -5.06816 | gap 1, overlap 865946 ATGTTTCAACAAAAA GCAT-ATCCG CATT CGGATGACGC TCCACCTGCAACACT TERM 981 866036 - 866065 + g 75 -5.7 -4.65078 | gap 1 AACCGTGCAGTATCT GAGGGAGGGGGCAT TTC ACGCTCC-TCCTTC TTTTGTTGAGCGTCT TERM 982 866434 - 866411 - G 95 -9.6 -5.06451 | TACCACGGCAAAAAA GGATGCGCTA AAAT CAGCACATCC CGAATCACATAGCAT TERM 983 866623 - 866642 + g 78 -8.6 -4.20783 | gap 1 TGCAGTATTCCGCAC CGCTTCGCG GAG CGC-AAGCG TTTCTTCCATCACCT TPASS_0799 867984 - 868136 + | hypothetical protein TERM 984 868302 - 868275 - f 76 -12 -3.01712 | gap 1, opp_overlap 868263 868275 GCTCTGTCCCTAATA CG-GTGTGCCGGG ACA CCCGGTACACGCG TGTACTGCCCGTTTG TERM 985 868275 - 868302 + F 83 -14.2 -2.80307 | gap 1, opp_overlap 868275, overlap 868263 GCTCTGTCCCTAATA CG-GTGTGCCGGG ACA CCCGGTACACGCG TGTACTGCCCGTTTG dacC 868279 - 869751 + | serine-type D-Ala-D-Ala carboxypeptidase clpA 872241 - 869812 - | ATP-dependent Clp protease, subunit A TERM 986 870496 - 870521 + g 70 -10.4 -3.12923 | opp_overlap 870492, overlap 870492 870491 CCCAACATAACCGGG CGGTGAGCCG ATCAAC CGACTCACCG TGTGCTTTTCCTGAT TERM 987 872390 - 872362 - g 81 -12.4 -3.14125 | gap 1, overlap 872355 872360 TTCATATACGCAAGA CGCGCAGGCACGC CTTT GCGCGCC-GCACG AACGGCAAAAACGAT TPASS_0802 872287 - 872616 + | hypothetical protein TERM 988 873178 - 873158 - g 72 -7.6 -3.86015 | gap 1, opp_overlap 873161 873162, overlap 873172 TATCTTTGTTACAAA CTCGCGCGT AACC ACGCGC-AG CGCACTGCGCTTGGG TERM 989 873360 - 873350 - g 90 -4.6 -5.43553 | AGGGAAAAAACAAAA CCGA TTA CCGG GAACATAGCATCCAC TERM 990 873728 - 873712 - g 70 -6.5 -4.18018 | opp_overlap 873725 873727 TTTTGCTATTCAAAA CGGCG GTGGACA CGCCG GTGCCATCGGCTTCC TPASS_0803 872630 - 873838 + | hypothetical protein rnb 877209 - 874930 - | exoribonuclease II ugpC 873916 - 875079 + | sugar ABC transporter, ATP-binding protein TERM 991 875620 - 875644 + gT 76 -4.1 -4.91109 | overlap 875614 GGCGGTTGTGCTCAC GCGACGAGC TTTCATC GCGCGCCGC TTTTTGTACTCCCCC TERM 992 876064 - 876048 - GT 79 -10.1 -3.83026 | overlap 876059 CCTCCGCATAGGAAA GGCGCGT AAC ACGCACC ATGCTCCGGAGCACG TERM 993 876880 - 876866 - GT 74 -2.8 -4.88918 | overlap 876861 876868 TCATTGCAAACAAAA TACGCA CTT TGCACA CTTTGCTCCCAATAG TPASS_0806 878702 - 877206 - | possible protein FemA TERM 994 877972 - 877924 - G 70 -5.9 -4.26903 | gap 1, opp_overlap 877931 877934, overlap 877925 GCGAGCGTATCAAAA CGCGCCACA-CGCACACCGTGC TTTTGC GCACGTCGAACGTTGTAGCGCC ATTTTGGTTTGAAAG TERM 995 877934 - 877944 + g 70 -6.8 -4.08767 | opp_overlap 877925 877924, overlap 877931 CAAAACGCGCCACAC GCAC ACC GTGC TTTTGCGCACGTCGA TERM 996 878771 - 878804 + H 71 -9.5 -3.61398 | TGCACAATGGCGAGC CTGTGTGTTGCGGTC GACG GTCCGAAGCGCACAG TTCTTGCGCAGAAAG TERM 997 878883 - 878861 - g 76 -7.6 -4.21827 | opp_overlap 878864, overlap 878864 GCAAATACCTCAAAA GCACGCACCC GTA GAAGGCGTGC GGTTAATATGCGGCT rpmF 878831 - 879019 + | ribosomal protein L32 acpP 879080 - 879316 + | acyl carrier protein TERM 998 879731 - 879757 + G 91 -2.9 -5.53288 | gap 1, overlap 879732 AAGCCATCCTTGCCG ACGCTACCGAAG CTGT CATCGGT-GCGC TTTTTTTGGATTCAG TERM 999 880031 - 880016 - g 100 -6.1 -5.55664 | overlap 880018 880026 GCACCAGCAAAAAAA GCGCA GAACAG TGCGC CGCTCGCCTTGCATG rnc 879313 - 880077 + | ribonuclease III TERM 1000 880537 - 880559 + G 70 -5.4 -4.42386 | TTCAATGTGCCTCTC GGACGCGCTG CAC CTGCGTCTCC TTTTCTAAATACCAC dam 880108 - 881019 + | DNA adenine methyltransferase TPASS_0811 881215 - 881090 - | hypothetical protein TERM 1001 881901 - 881937 + r 74 -2.2 -5.1101 | gap 1, opp_overlap 881883, overlap 881902 TGCACCGCGCGATAT GCACAGCGTGTACTGCG TGTA CGCAC-GCACGATGTGG TTTTTTCGCTCCTCC TPASS_0813 883912 - 882626 - | hypothetical protein TERM 1002 882726 - 882744 + g 70 -4.5 -4.56597 | opp_overlap 882709 882739 AGCCGAACGAATACG GCACCCT CAGAT AGTGTGC TTTTTGCGCACCCAG TERM 1003 882916 - 882904 - G 70 -4.8 -4.4715 | CGTTAATGTACAAAA CAGG CTTCC CCTG ACGGAAAAAAAGGTA TERM 1004 883811 - 883783 - G 89 -13.1 -3.28712 | overlap 883764 883766 883784 CGCGCCGGCGTACAA CCTGCGCACGCCG AGG CTGCGTGCGCAAA GCACACAGCGCGCGC TERM 1005 883810 - 883784 - G 90 -14.4 -2.57132 | overlap 883764 883766 883783 GCGCCGGCGTACAAC CTGCGCACGCCG AGG CTGCGTGCGCAA AGCACACAGCGCGCG TERM 1006 884821 - 884808 - g 72 -8.1 -3.92602 | opp_overlap 884808 884819 TTAAGACGGGAGAAA CGCGA GAGC TCGCG TGTGATGCTGTTTTC trxB 884135 - 885058 + | thioredoxin reductase TERM 1007 885879 - 885848 - g 72 -8 -3.96506 | gap 1, overlap 885843 CAGTCCAAAACATAA GGCGACCGTGCGTAC CCT GCACGCAC-ATCTCC GTACACGCGTGATAT TPASS_0815 885180 - 886163 + | hypothetical protein TPASS_0816 886900 - 886235 - | hypothetical protein TERM 1008 886888 - 886867 - G 100 -13.7 -4.2558 | TATCGCTGACGAAAA CTCCCGCGC CCAT ACGCGGGAG TATAAAACACATCCT eno 888336 - 887038 - | enolase TERM 1009 887848 - 887858 + g 73 -4 -4.77567 | CATAACCATAAACTC TTGA AAG TCAA TTTTATTATCAGAAT TPASS_0818 888485 - 888333 - | hypothetical protein TPASS_0819 889444 - 888512 - | hypothetical protein TPASS_0820 890242 - 889472 - | hypothetical protein tpn32 891144 - 890338 - | lipoprotein Tpn32 TPASS_0822 892130 - 891225 - | hypothetical protein TERM 1010 891521 - 891532 + g 70 -5.8 -4.18197 | CACTTCCATACGCCA CGGA AACT TCCG TTTTCACTCGGCGAT rbo 892604 - 892218 - | desulfoferrodoxin TERM 1011 892970 - 892992 + H 81 -8.4 -4.31692 | TAGTCTCGGCCCGTG CGCCTTCTGT TCG ACATGAGGCG TTTTCGTCATGGATT TERM 1012 893628 - 893614 - g 95 -12.8 -4.22338 | ACCAGAAGCTCAAAA CGCGGC TTC GCCGCG CGCTCCAGACTGTCC dxs 893001 - 894893 + | deoxyxylulose-5-phosphate synthase TERM 1013 894989 - 894977 - g 76 -10.5 -3.37053 | ATACAGCGGAAGGAA CGGGG AGG CCCCG CCTGCTCACGCCAGG TPASS_0825 894890 - 895075 + | hypothetical protein TPASS_0826 895062 - 895883 + | hypothetical protein TERM 1014 896459 - 896470 + GF 77 -5.8 -4.64861 | opp_overlap 896458 TTGGACTTATCAATC CGAG TACG CTCG TTTCTTTTCCAAAAA TPASS_0827 895546 - 896823 + | hypothetical protein acpS 896820 - 897197 + | holo-acyl-carrier protein synthase TERM 1015 897247 - 897230 - g 93 -3.5 -5.53079 | gap 1, opp_overlap 897230 AAAACAGACAAAAAA GAAAG-CA CTG TGTCTTTC TATTCAAAAGAGCGC TPASS_0829 897194 - 898078 + | hypothetical protein hisT 898075 - 898917 + | pseudouridylate synthase argS 900696 - 898927 - | arginyl-tRNA synthetase TERM 1016 899483 - 899509 + g 70 -11 -2.79796 | TCTTCTGCCGCACTG TGCAGACGAT CCAAGAT ATCGTCTGCA TCTACTACCGTCCCC TERM 1017 899839 - 899829 - G 79 -2.4 -5.26316 | CCATCTGATAAAAAA CGCC GCA GGCC AAACCACGTCTAACC TPASS_0832 901534 - 900719 - | hypothetical protein TERM 1018 901703 - 901692 - g 72 -4.4 -4.65895 | opp_overlap 901692 TGCTGCAGCCAAAAA CCAA CGCT TTGG ATCTTGTCGTGCAGG TERM 1019 901805 - 901786 - g 86 -10.8 -3.90048 | overlap 901784 901802 CCCTCCTGAAAAAGA CGTGTTCT TCAC AGAACACG AAGGGGTGCTTCGTG TERM 1020 901949 - 901964 + G 75 -6.8 -4.36914 | overlap 901939 GTGCGCGGCGTACGC GCGGTG TGGT CACTGC TTTTGTGCAACGAAG TPASS_0833 901601 - 902323 + | hypothetical protein tyrS 903630 - 902380 - | tyrosyl-tRNA synthetase TERM 1021 903596 - 903575 - G 72 -4.3 -4.63932 | overlap 903576 903578 903590 CATTGTCTAATAAAA CCACGCGCC TGAA GACGCGCAA GCGCAGGATTCATGG TERM 1022 903759 - 903731 - R 77 -8.1 -4.08945 | ACTATTCCTTTAAAA GCGCTGCAATCTT CGG ACGACTCCAGCGC ACCGCAACGTCATAG TPASS_0835 906521 - 903717 - | possible ankyrin TERM 1023 905364 - 905376 + g 81 -4.7 -5.13741 | opp_overlap 905363 905364, overlap 905363 905365 AATCGTGAGGACAAG CGGCG TTT CGCCC TTTTTGTTCCGTTCA TPASS_0836 907486 - 906662 - | hypothetical protein TERM 1024 906993 - 906965 - G 70 -3.7 -4.68593 | opp_overlap 906968, overlap 906966 906968 GCTACGATGCAAAAA TGACTGCACCTGC CGT GCACGCGCAGTTC CTGCTGGATCTTGCG TERM 1025 906990 - 906968 - G 70 -9.8 -3.26807 | opp_overlap 906968, overlap 906966 906965 ACGATGCAAAAATGA CTGCACCTGC CGT GCACGCGCAG TTCCTGCTGGATCTT TERM 1026 907046 - 907062 + g 70 -3.6 -4.63218 | overlap 907047 GAGCTGAACCGTTTT TGCCGT GTGAA GCGGCG TTTTGTTCAACAGCA TERM 1027 907369 - 907344 - G 90 -7.5 -5.02074 | gap 1, overlap 907345 907346 GCACGGTGCAAAAAA GCCTGCGGCGTG CAA CACGCCACTG-C AGACTGCGCTGCATG TERM 1028 907368 - 907346 - G 70 -11.2 -2.75975 | overlap 907344 907345 ACGGTGCAAAAAAGC CTGCGGCGTG CAA CACGCCACTG CAGACTGCGCTGCAT TERM 1029 908531 - 908517 - g 82 -2.8 -5.26875 | TCTTCAAGCAAAAAA CACG CAGTTAC CGTG ATCTCCCGCTCCGTC TERM 1030 909351 - 909361 + G 72 -6.8 -4.20883 | overlap 909327 CCCAGCACTCAATGG GGCT CTC AGCC TTTTCCACCTTTTTG thrS 907634 - 909412 + | threonyl-tRNA synthetase TPASS_0838 911125 - 909461 - | ABC transporter, ATP-binding protein TERM 1031 909977 - 909992 + g 72 -6 -4.36914 | opp_overlap 909949 909975 909977 TCCCCAACGGAAAGA GCCGGC ATGT GCCTGC TTTTCTCCAGCAAGA TPASS_0839 912207 - 911200 - | hypothetical protein TERM 1032 912182 - 912195 + g 82 -2.3 -5.35222 | AAACAAACGATAACA GTGTG TGCA CGCGC TTTTTTGTCCATTTT TERM 1033 912630 - 912648 + G 75 -5.2 -4.64763 | GCACAAGACTATACG GCACTTGC ACT GTATGTGC TTATTTTTTCCGTCG TERM 1034 913153 - 913174 + G 93 -10.1 -4.49344 | TCACCGTATGTGCAT CCGGCGGTG CACT CATCGTCGG TTTTATAATGAGTTT TERM 1035 914456 - 914443 - g 86 -6.7 -4.88067 | ACCTAGGGACAAAAA CAGCA CTCC TGCTG AGTCTTACGTTGGAG TPASS_0840 912312 - 914561 + | hypothetical integral membrane protein htrA2 916080 - 914623 - | periplasmic serine protease DO TERM 1036 914785 - 914809 + g 70 -10 -3.18264 | gap 1, overlap 914784 CTTCAATCCCATCAG CGCCGCAGGGC TTTT GCTCTGCG-CG TTGCTAACTAGCACA TERM 1037 914909 - 914921 + g 74 -2 -5.14965 | GGCCAAAGCTTTGAG TAGT CATTT ACTA TTTTTTCATCACGCT TERM 1038 915621 - 915589 - G 90 -13.4 -3.53012 | opp_overlap 915607 GTCTGCGTCCTCAAA GGAGACCAGCGCGA TGTCC TTGCGCTGGTCACC ACCGACAAGTTTACC TERM 1039 916136 - 916119 - R 76 -2.7 -5.01497 | gap 1, overlap 916120 916122 916126 916127 AGCAGCAGATAAAAA CGAGCAAC GCC GCTGCT-G TAAAAAAACTGCGGC TERM 1040 916160 - 916145 - R 90 -4.6 -5.40072 | overlap 916127 916126 916146 GCTGCTGTAAAAAAA CTGCGG CATA CCGCAT GTACCCCACACACAA TERM 1041 916159 - 916146 - R 71 -8.1 -3.83561 | overlap 916127 916126 916145 CTGCTGTAAAAAAAC TGCGG CATA CCGCA TGTACCCCACACACA map 917159 - 916392 - | methionine aminopeptidase TERM 1042 916476 - 916451 - G 74 -6.2 -4.56597 | gap 1 TGTGGTCTGCAAAAA CTGCCACAGTG TGCTC CAC-ATGGCAG GCACACGATCCGTCT TERM 1043 916742 - 916729 - G 71 -9.5 -3.53174 | opp_overlap 916739, overlap 916717 916727 ACAGCGCGAGAAACA GCGCG CACG CGCGC TCCGGCACGGCACGC TERM 1044 916893 - 916856 - G 74 -8.5 -3.87373 | overlap 916886 GACACGCGTCAGAAA TGTATCCATTGAGGTTG ATAC CAACATCAAGGGAAACA AGATCCCCGTCCTGA TPASS_0843 918107 - 917283 - | possible heat shock protein TERM 1045 918119 - 918103 - G 83 -5.1 -5.03994 | GGGCACATAGAAAAA TGCAAGG GAG CCCTACA GCAAAGAGGGATTGA gap 918200 - 919252 + | glyceraldehyde 3-phosphate dehydrogenase TERM 1046 919296 - 919255 - T 70 -9.5 -3.34233 | gap 1, opp_overlap 919255 919257 919259 919263 GCAGAAGCGGTAGAA GACACTAGGAGTCCACCCGC CCG GCCT-TGGACTCTTAGTGTC TTGCGTGCGGTCACC TERM 1047 919255 - 919296 + T 76 -11.7 -3.06796 | gap 1, opp_overlap 919255, overlap 919257 919259 919263 GCAGAAGCGGTAGAA GACACTAGGAGTCCACCCGC CCG GCCT-TGGACTCTTAGTGTC TTGCGTGCGGTCACC TERM 1048 919310 - 919320 + T 74 -8.2 -3.94333 | overlap 919304 919316 TCTTGCGTGCGGTCA CCGG CGG CCGG TTTGGCTTTTCCCTT TPASS_0845 919897 - 919307 - | hypothetical protein TERM 1049 919826 - 919792 - G 80 -12 -3.28712 | overlap 919763 919795 CCGCTCTCGCGACAA GTACGCGGACGCGCGC GGG GCATGAGTCCGCGTCC ACCCACAGCGTCACC TERM 1050 919823 - 919795 - G 77 -12.3 -2.82623 | overlap 919763 919792 CTCTCGCGACAAGTA CGCGGACGCGCGC GGG GCATGAGTCCGCG TCCACCCACAGCGTC TPASS_0846 920204 - 919878 - | hypothetical protein TPASS_0847 920539 - 920204 - | hypothetical protein rplT 920901 - 920533 - | ribosomal protein L20 rpmI 921134 - 920934 - | ribosomal protein L35 infC 921726 - 921187 - | translation initiation factor 3 TERM 1051 921771 - 921751 - H 84 -6.1 -5.05782 | overlap 921754 ATGCACGCTAAAAAA CAAGACTGG GCC CCAATCTAG CCATTCCTAATATGT TERM 1052 921768 - 921754 - H 75 -6.4 -4.63089 | overlap 921751 CACGCTAAAAAACAA GACTGG GCC CCAATC TAGCCATTCCTAATA TERM 1053 922153 - 922170 + G 76 -12.7 -2.60763 | overlap 922152 GGGCTCGTACGCATC GCGTCGC TCGA GCGACGC CTTCTGCGATATCAC TERM 1054 923248 - 923236 - g 100 -3.3 -5.95166 | overlap 923226 923221 923237 CGCAACGAAAAAAAA TTCGC TGC GCGAG ACAAACGAAAAACGA TERM 1055 923247 - 923237 - g 72 -6.8 -4.15473 | overlap 923226 923221 923236 GCAACGAAAAAAAAT TCGC TGC GCGA GACAAACGAAAAACG TPASS_0851 921889 - 924063 + | hypothetical protein lgt 925090 - 924092 - | prolipoprotein diacylglyceryl transferase TERM 1056 924314 - 924303 - G 100 -2.2 -5.8187 | TACTCAATAAAAAAA CGAA ACAC TCCG TACCCCACCACATAC TERM 1057 925220 - 925201 - R 71 -4.2 -4.57569 | opp_overlap 925203, overlap 925203 925213 925215 GTATTCTCCCAAAAA CACCCCCA CAAA TAGGGGTT ATACCCCACCCTCAT ylxH2 926377 - 925241 - | ATP-binding protein TERM 1058 925950 - 925936 - G 76 -7.8 -4.19817 | overlap 925892 GGTAGGCATTCAAAA CCGCAG AAA CTGCAG GCTCAGTAACGATAA TPASS_0854 931033 - 926432 - | hypothetical protein TERM 1059 926781 - 926766 - G 70 -4 -4.65895 | opp_overlap 926773, overlap 926767 TTTTGTAGGGAAAAA CCTTTC CTCA GAAAGA CTGATTCGATAATGC TERM 1060 926930 - 926920 - G 70 -4.6 -4.56597 | opp_overlap 926920 GCTTGTTTCTAAAAA GACG CTT CGCC TCTTCTATGCCATCA TERM 1061 929100 - 929113 + g 74 -2.3 -5.0538 | ATCGACATCTGCAAT GAACC GGCA GGATC TTTTTTCACATCCAC TERM 1062 930471 - 930458 - G 76 -3.8 -4.96848 | overlap 930467 TTCGGTAGACAAAAA CTCC TGAAAG GGAG TCCAACGCTCCCCAT TPASS_0855 934413 - 931030 - | hypothetical protein TERM 1063 933594 - 933582 - G 86 -9.1 -4.29656 | GAGAAAACTTTAAAA GCGCT CCA AGCGC TTGGACCAGGGAAGT TERM 1064 933724 - 933691 - G 100 -18.9 -2.8194 | TAAGGAGTGAGGATA CGCTGCACTCGGTGC GCGG GCACCGGGTGCAGCA GGCGCAGCGGGGGCG TERM 1065 933869 - 933901 + g 100 -16.3 -4.57341 | opp_overlap 933867 933866 933864, overlap 933872 933873 GCGCGGGAAACATGC GCATGTGCGTGCTCG ACG CGAGCACGCACCTCC TTTTTCCCCGGACTT TERM 1066 933872 - 933898 + g 100 -16.6 -3.23708 | opp_overlap 933867 933866 933864, overlap 933869 933873 CGGGAAACATGCGCA TGTGCGTGCTCG ACG CGAGCACGCACC TCCTTTTTCCCCGGA TERM 1067 933873 - 933897 + g 100 -20.1 -2.53903 | opp_overlap 933867 933866 933864, overlap 933872 933869 GGGAAACATGCGCAT GTGCGTGCTCG ACG CGAGCACGCAC CTCCTTTTTCCCCGG TERM 1068 934102 - 934120 + g 77 -6.6 -4.44974 | CTCGTGTATTTCTTT GCTCTCTG GAC CGGCGAGC TTTTCTAACGTTTCG TPASS_0856 934569 - 935546 + | hypothetical protein TPASS_0857 935869 - 935549 - | hypothetical protein TERM 1069 935764 - 935754 - Gf 74 -8.2 -3.93288 | opp_overlap 935757, overlap 935755 TCGGACGCAAGTAAA GCGC GCG GCGC CAGCGCTGCGTGATT TERM 1070 935757 - 935774 + gF 70 -10.5 -2.70932 | opp_overlap 935754 935755 GACGCAAGTAAAGCG CGCGGCG CCAG CGCTGCG TGATTGCCAAAGGCG TERM 1071 935786 - 935808 + gF 100 -12.7 -4.77173 | gap 1, opp_overlap 935786 TGCGTGATTGCCAAA GGCGGCTGCC CAGG GGC-GCCGCC TTTCTTTTCTCCGCG TERM 1072 935808 - 935786 - Gf 88 -12.7 -3.57144 | gap 1, opp_overlap 935786 TGCGTGATTGCCAAA GGCGGCTGCC CAGG GGC-GCCGCC TTTCTTTTCTCCGCG TERM 1073 937022 - 937038 + GH 70 -10.9 -2.71246 | overlap 937019 GGAGTGGGTGCACAG GTGCGAA GGC TTCGCAC TACCTTTCCTTGGGT TPASS_0858 935854 - 937080 + | hypothetical protein TERM 1074 937129 - 937157 + FH 100 -8.2 -5.14563 | GCTGAAGAATGCGGA GCGGCAAGAC GTGGAGGGG GTTTTGCCGC TTTTTTGGTGCGGCG TPASS_0859 937162 - 937860 + | hypothetical protein TERM 1075 938066 - 938044 - g 72 -7.6 -3.96216 | CCTTCACGGAAATAA CGGCGCCG GAGGCAG CGGCGGCG GTGGAGGGGGCAATG TERM 1076 938135 - 938151 + G 82 -3 -5.26119 | gap 1, overlap 938133 938132 ATCCTTGCGCTTGCG TACCAGC CGGT GC-GGTA TTTTCTTTTTGGCGC TPASS_0860 937925 - 938647 + | hypothetical protein glmS 940629 - 938722 - | glucosamine-fructose-6-phosphate aminotransferase TERM 1077 939201 - 939183 - G 86 -11 -3.90762 | overlap 939181 CACGCCCCAAAAAGA GCGCATGC TGC GCATGCAC AAAATGCCGCGCGCA TERM 1078 939226 - 939206 - G 75 -6.7 -4.42386 | overlap 939207 TGCGCATGCACAAAA TGCCGCGCG CAC CGCGCAACG TCTGCCTCACACTCA TERM 1079 939225 - 939207 - G 70 -10.2 -3.2511 | overlap 939206 GCGCATGCACAAAAT GCCGCGCG CAC CGCGCAAC GTCTGCCTCACACTC TERM 1080 939273 - 939316 + g 74 -2.3 -5.08824 | opp_overlap 939288, overlap 939277 CCTGAGGCAGTCGCT GGAGCGC-CGCAGAGAGCGCG TCCT CGGGCTC-CTGCGTGAGTATC TTTTTTGCCTGCGCA TERM 1081 940043 - 940022 - G 100 -5.1 -5.47431 | gap 1, overlap 940034 TCAAGATACAAAAAA CGCT-GCGTA ACA TGCGCAAGCG CAAGCGGGTCTGACG fklB 941660 - 940866 - | peptidyl-prolyl cis-trans isomerase, FKBP-type, 22 kDa TERM 1082 941012 - 940992 - G 93 -9.7 -4.58076 | AGAAGGCACATAAAA CCGATAGGT AGA ACCCACCGG CATCAGCTTTAAGCC TERM 1083 942582 - 942572 - g 75 -4.6 -4.8048 | GGCGGACAGGAAAAA GAGC GCC GCCC GGGAACTGAGAACCT TERM 1084 942602 - 942640 + G 100 -13.7 -3.70109 | opp_overlap 942592 942596 ACTGAGAACCTTGCA GGTGCGCTCGCGCTCGC CGCTT GCGTGCGCGAAGGCGCC TTCTTCCGTACTCTA TERM 1085 942976 - 942996 + G 85 -8.9 -4.48449 | opp_overlap 942972 942971, overlap 942965 942977 CGGGGTAGAATCCCG CGCAACGCG CGG CGTGCTGCG TTTCTCTTTTGGTCC nifS2 941795 - 943078 + | nitrogen fixation protein TPASS_0864 944777 - 943137 - | hypothetical protein TERM 1086 944166 - 944193 + g 85 -8.4 -4.52589 | gap 1, opp_overlap 944159 944158, overlap 944167 AAAACGAGGCACCGC G-GTGCGCGCAAG CGG CGTGCGTGCACTC TTTTCTCTCCGGAAA TERM 1087 944167 - 944191 + g 93 -12.1 -3.87627 | opp_overlap 944159 944158, overlap 944166 AAACGAGGCACCGCG GTGCGCGCAAG CGG CGTGCGTGCAC TCTTTTCTCTCCGGA TERM 1088 944789 - 944759 - G 81 -9 -4.06419 | gap 1, opp_overlap 944757 944759 944763, overlap 944763 GCCCCGTATAAAGAA CACACCTCGCCGG GCGCAA CCGCCGAGG-GTG TCTTTCCCGATAAAG TPASS_0865 946253 - 944811 - | hypothetical protein TERM 1089 945053 - 945036 - G 91 -7.7 -5.14563 | GTCTCGATTAAAAAA TCCTGCA ATTC CGCAGGA AATGACATGCTCATC TERM 1090 945311 - 945297 - G 70 -5.6 -4.32857 | overlap 945300 CGTGCCAAAGAGAAA CCACCG TAT CGGTTG ATACGCACATGCGAG TERM 1091 946036 - 946010 - G 95 -15.8 -2.87931 | overlap 945987 CGGACGTTCCAGACA CGGCACGCCGCA CCC TGCGGTGCGCCG GCACTCGTGCGCGAA TERM 1092 946196 - 946176 - G 83 -10.3 -4.09108 | CCGAACTGATAGAAA GCTGCGCGC ACC GCGCACCGC AGCACATCCGCACGC TERM 1093 946903 - 946918 + r 70 -3.2 -4.72272 | overlap 946903 AGCAACTGAAACCGT GCAGGA TACG TGCTGC TTTTTCCTGCGCGAC TPASS_0867 948431 - 948246 - | hypothetical protein flaB1 948600 - 948956 + | flagellar filament 34.5 kDa core protein TERM 1094 949583 - 949618 + G 100 -20 -4.18018 | AGGCCTTCGTGTGGG CGGTTCTGAGGCTTTT TCTA AAAAGCTTCAGAACCG TTTTCCGTGGCGCGG TPASS_0869 949468 - 949704 + | hypothetical protein flaB3 949732 - 950589 + | flagellar filament 31 kDa core protein TERM 1095 950673 - 950701 + T 100 -10.4 -5.2894 | opp_overlap 950682 TGTGAACGCCCATGA GGGAAAGAGG AGCCGCATG CCTCTTTCCC TTTTCTTTTCTCTTT TPASS_0871 950811 - 950650 - | hypothetical protein fliD 950887 - 953055 + | flagellar filament cap protein TPASS_0873 953067 - 953669 + | hypothetical protein TPASS_0874 953666 - 953941 + | hypothetical protein TPASS_0875 953981 - 954388 + | hypothetical protein TPASS_0876 954435 - 955100 + | hypothetical protein TPASS_0877 955105 - 956202 + | hypothetical protein TERM 1096 956214 - 956230 + T 70 -2.9 -4.70169 | CTGAGCATCCTCAAT CCTAGTC AGA GATAAGG TTTTCTTCGGTGTCA TPASS_0878 957165 - 956215 - | hypothetical protein TPASS_0879 958652 - 957171 - | hypothetical protein TERM 1097 957489 - 957505 + g 72 -5.8 -4.4267 | opp_overlap 957489 ACGAAATGCAACAAA TGCCTG GGGAG CGGGCA TTTTACCTTTTGCAA TERM 1098 957633 - 957620 - G 81 -6.7 -4.72007 | GGGCAGGAAAAGAAA CTCGT ATTG ACGAG GGCCAAAATAATCGA TPASS_0880 959374 - 958649 - | possible membrane spanning protein natA 960170 - 959364 - | ABC transporter, ATP-binding protein TPASS_0882 961751 - 960249 - | hypothetical protein TERM 1099 960585 - 960604 + gr 100 -2.8 -5.67063 | gap 1, opp_overlap 960584, overlap 960572 960590 CCCTGCTGCAGCAAC GCGTGCACG CAG TGTGT-CGC TTTTTTTCTCATCCA TERM 1100 961041 - 961027 - GR 100 -10 -4.94243 | TTAAAAAAATCAAAA GCATGC TCA GCATGC AACTGCTCAAGAGCT TERM 1101 961149 - 961134 - GR 71 -3.2 -4.74132 | overlap 961136 ATACCTCACTAAAAA TTCGGA ATCT TCCGTA CTCCCCATGTTTCCA TPASS_0883 962814 - 961717 - | hypothetical integral membrane protein TERM 1102 962283 - 962296 + gr 73 -3.9 -4.77438 | CGATAAGCTTCTGAA TAGTA CCGT TACTA TTTTTCATAATAACT TERM 1103 962820 - 962843 + r 87 -8.2 -4.5442 | opp_overlap 962820, overlap 962821 TGTCCAACATATACA CCTGCAGTAT TTTC ATACTGCAGA TTTTCTCATTGACAA TERM 1104 962821 - 962842 + r 80 -11.7 -3.3217 | opp_overlap 962820, overlap 962820 GTCCAACATATACAC CTGCAGTAT TTTC ATACTGCAG ATTTTCTCATTGACA TPASS_0884 963920 - 962832 - | hypothetical integral membrane protein TERM 1105 963612 - 963602 - G 87 -4.6 -5.30448 | AAACAAATACAAAAA GCGC ACT GCAC AAACCAATCGACAAA TERM 1106 963662 - 963645 - G 80 -5.5 -4.88228 | gap 1, overlap 963646 963657 AGGGAATATCAAAAA CCGCGGCG AAA CGCC-CAG CACTTGCAGCGCAAG dut 964390 - 963950 - | deoxyuridine 5'-triphosphate nucleotidohydrolase pnp 966495 - 964387 - | polyribonucleotide nucleotidyltransferase TERM 1107 964858 - 964832 - G 70 -6.6 -4.13945 | overlap 964833 ACCGCTATTTTAAAA CTCTCAATATGC GGC GCATAGCGAGAA ATGTGCACGCTCGGT rpsO 966912 - 966643 - | ribosomal protein S15 TERM 1108 966742 - 966761 + g 77 -7.2 -4.54821 | gap 1, opp_overlap 966741 966744, overlap 966742 966744 ACGCCCCACCAGAAC G-AGCAACC CCC GGTTGCTAC TTTTGTCCTTCGGAT TERM 1109 966744 - 966758 + g 70 -10 -3.22215 | opp_overlap 966741 966744, overlap 966742 966742 GCCCCACCAGAACGA GCAACC CCC GGTTGC TACTTTTGTCCTTCG TERM 1110 966867 - 966894 + g 77 -9.9 -3.61988 | overlap 966863 CCTTTTCTCCTGAGC CGTACTGCTGC ACTACC GAAGCAGTACG TTCCTTTGTCAGTGC ribF 967755 - 966928 - | riboflavin kinase/FMN adenylyltransferase truB 968859 - 967759 - | tRNA pseudouridine 55 synthase rbfA 969217 - 968837 - | ribosome-binding factor A infB 971742 - 969214 - | translation initiation factor 2 TERM 1111 970930 - 970917 - G 75 -5.3 -4.62069 | opp_overlap 970909 TGCCCATGCCAAAAA GCTTA CCGA TAAGC TCTGAGGCTTTTAAA TERM 1112 971673 - 971692 + g 70 -6.4 -4.25104 | gap 1 AAATAGTCGCCTGAC TCGCGTCGC CCG GCG-TGCGA TTTTCATCCGCGCAC nusA 973375 - 971918 - | N utilization substance protein A TERM 1113 972273 - 972299 + g 81 -8.2 -4.36914 | opp_overlap 972270 GAAGAAAACTCAGAC TCTTCTTGATAA TCG TTATCAAAAAGA TTTTCTGCCGCACGA TPASS_0893 973895 - 973425 - | hypothetical protein TERM 1114 973811 - 973793 - G 72 -7.4 -3.88787 | GCACACGCCGAGAAA CAGCGGAA ACG CTCCACTG CAGATCGACAAGGGC TPASS_0894 975092 - 974070 - | hypothetical protein TERM 1115 974405 - 974393 - G 72 -4.8 -4.62336 | ACTGCACCTCAAAAA GCTC AGGAA GAGC CTCCACCATTTCCCG TPASS_0895 975605 - 975099 - | hypothetical protein TPASS_0896 975779 - 975627 - | hypothetical protein TERM 1116 975697 - 975660 - G 100 -25.9 -4.56597 | opp_overlap 975660 GCGCCGGCGCAAAAA TTCCACGTATCGGGTCA CATA TGACCCGATACGTGGAA TTTTTGCATACCTTC TERM 1117 975660 - 975697 + g 100 -25.9 -4.68424 | opp_overlap 975660 GCGCCGGCGCAAAAA TTCCACGTATCGGGTCA CATA TGACCCGATACGTGGAA TTTTTGCATACCTTC tprK 977278 - 975761 - | protein TprK TPASS_0898 980994 - 977275 - | possible ATP-dependent nuclease, subunit A TERM 1118 977664 - 977647 - G 72 -6.9 -4.20516 | overlap 977650 977658 GGGGGAGTGAAGAAA GCAGGCC ACAA GGCGTGC CGCAGGGGAATCAAC TERM 1119 978796 - 978757 - G 76 -3.5 -5.0133 | gap 1, overlap 978758 978778 CACGCGCGCAAAAAA GTCCGCGCCTGC-ACG TACACACCG CGCCGCAGGCGCCGAT AACTCCGCGGGGATA TERM 1120 979026 - 979051 + g 74 -9.7 -3.48276 | gap 1, opp_overlap 979025 979016 GAATACCCCACAGAC GCAGCGCGCGCT CGT ACCGCGC-CTGC TTGTCTGCAGAACGC TERM 1121 979435 - 979455 + g 88 -12.5 -3.70104 | opp_overlap 979431, overlap 979444 TGAAAACAGTATGTT GAGGCGCTC AAG GAGCGCCGC TTCTGTTCGGTAATT TERM 1122 979683 - 979695 + g 74 -10.5 -3.21099 | opp_overlap 979681 979682 CAGGAGGGAGGAAGT GCGCG GTG CGCGC TTCGTGCTCGGCAAG TERM 1123 979729 - 979719 - G 100 -5.4 -6.09888 | CGGCAAGAAAAAAAA GAAG TTC CTTC TGGAGGGCATTGTTA TERM 1124 980076 - 980064 - G 85 -3.3 -5.36441 | CCTTCAGACAAAAAA GCGTT TTT ACCGC CGCACAATACCGCAG TERM 1125 980509 - 980495 - G 74 -2.8 -5.00616 | opp_overlap 980495, overlap 980497 TCCTGCTGCAAAAAA TGCAGT ACC ACTGGA TGTTCCCGATGCTCA TERM 1126 980625 - 980608 - G 88 -8.3 -4.70659 | opp_overlap 980607, overlap 980592 980609 CGCGATACCGAAAAA GCGCGCG CCTA CCCGCGC AATTTCGTGCGAAAA TPASS_0899 981578 - 980991 - | hypothetical protein TERM 1127 981262 - 981250 - G 100 -3.3 -6.07627 | overlap 981251 ACGTCTAAAAAAAAA GCGTG CGT CACGG TATACCCCGCCTGCT TERM 1128 981261 - 981251 - G 72 -6.8 -4.22949 | overlap 981250 CGTCTAAAAAAAAAG CGTG CGT CACG GTATACCCCGCCTGC TPASS_0900 983950 - 981557 - | hypothetical protein TERM 1129 982353 - 982337 - G 70 -4.4 -4.56775 | ATCCGCGCGCAAAAA GGTACC TCGCT GATACC GCACGCTACTCGCTT TERM 1130 982421 - 982403 - G 72 -4.4 -4.69027 | overlap 982404 AAAGTGATGCAAAAA GGGCGCAG CCG CCGCAACC CGATAGGGAAAAATC TERM 1131 982995 - 982960 - G 70 -6 -4.18494 | TATGCGGATTCAAAA GCAGCGCCCGCACGCT TTTG AGCGTGCCATGACTGC GCACAAACTCTCGAA TERM 1132 983915 - 983899 - G 93 -3.6 -5.49568 | overlap 983901 AAGGGAAAACAAAAA GACGCC TATAG GGCGTG CGGACAGTTTTTATA TERM 1133 983913 - 983901 - G 72 -6.2 -4.3613 | overlap 983899 GGGAAAACAAAAAGA CGCC TATAG GGCG TGCGGACAGTTTTTA TPASS_0901 985401 - 983989 - | hypothetical integral membrane protein TERM 1134 984388 - 984376 - G 84 -7.7 -4.67234 | ACCTAACCCTAAAAA GAACG CTC CGTTC ATCAACCACCGTGCA TERM 1135 984679 - 984696 + g 71 -2.6 -5.00616 | opp_overlap 984679 984691 ACAGCGACAAAAAAG CCGCAC ATAAAA GTCCGG TTTTTTAACCCGCAC TERM 1136 984980 - 984994 + g 76 -4.2 -5.00616 | CCTTCCGCTATAATC TGAGCA GCC TGCGCA TTTTTTCCCAACAAA est 986323 - 985442 - | carboxylesterase TERM 1137 985883 - 985872 - G 73 -3.6 -4.82901 | TTCTGGGGACAAAAA CGCG CCGC CACG AGTGCAGTCAGCACA TERM 1138 986391 - 986411 + G 81 -8.9 -4.36914 | overlap 986394 CTCGGCGTGCACGGC GGGGGCTGC GCG GCAGCCTGC TTTTGTGCAGAAGCG TERM 1139 986394 - 986408 + G 77 -11.4 -3.1733 | overlap 986391 GGCGTGCACGGCGGG GGCTGC GCG GCAGCC TGCTTTTGTGCAGAA murD 986325 - 987923 + | UDP-N-acetylmuramoylalanine--D-glutamate ligase TPASS_0904 987916 - 988167 + | hypothetical protein TERM 1140 988203 - 988171 - gf 72 -8.5 -3.72027 | gap 1 ATTGGGGAGTAAGAA GCGTCC-GTACTAC CGAATC GTAGTTCAGGACGC GCGCGAGCCGAGAGA rpsP 988130 - 988501 + | ribosomal protein S16 TERM 1141 988675 - 988693 + G 75 -11.6 -3.03459 | opp_overlap 988674 988673 AAGCACGGCAGAATT GCGCGCGC TCT GCGCACGC TCCTTTCTGCGTCTG TPASS_0906 988510 - 988752 + | hypothetical protein TERM 1142 989202 - 989217 + G 77 -8.2 -4.14392 | TTGAGCGTTGTCGAA GGGGGC GGTA GCTCCC TTTTAGAGGTTCAAA TPASS_0907 988815 - 989339 + | hypothetical protein TERM 1143 989363 - 989378 + GF 83 -7.5 -4.55697 | GTACTGACTCTCTTT CCCGC CATCCC GCGGG TTTATTTCTCCACCT TERM 1144 989756 - 989734 - gf 73 -12 -2.72344 | opp_overlap 989713 989728, overlap 989752 989754 TTGCATCGGGAACTA CGTTCTCTCC TCA GGAGAGATCG CCGCGCTCGTGCTCA trmD 989336 - 990088 + | tRNA (guanine-N1)-methyltransferase rplS 990060 - 990431 + | ribosomal protein L19 TERM 1145 990796 - 990806 + G 78 -8.2 -4.25283 | overlap 990784 GCCGCAGCTCATTGA GCGC TTT GCGC TTTTGCTAAAAAAGT TPASS_0910 990428 - 991348 + | hypothetical protein TPASS_0911 991370 - 991621 + | hypothetical protein TERM 1146 991805 - 991786 - g 70 -5.6 -4.43844 | overlap 991787 CGACGACGGAGAAAA CCTCCTCC TCAG GGAAGGGG AGCCGGTAAGCACTC TERM 1147 992242 - 992229 - g 72 -5.3 -4.52589 | opp_overlap 992229 TGCTGTCATACAAAA TCGAA GGAT TTCGA TTTGCAAAACCTGCA TERM 1148 992803 - 992823 + G 73 -9 -3.59583 | gap 1, opp_overlap 992774 992799 992796, overlap 992799 GGTAAAGACCACGGC CACGG-CGC CGTT GCGTCCGTG TTTAAGAATAGTTAT TPASS_0912 991634 - 992956 + | hypothetical protein TPASS_0913 992940 - 993320 + | hypothetical protein TERM 1149 993534 - 993552 + G 74 -3.1 -5.00616 | gap 1, overlap 993535 993536 AGAAGAAAAAGGAAG CG-CACGC CGAG GCGTGATG TTTTTTCGCCAAAGC TPASS_0914 993492 - 993878 + | hypothetical protein TERM 1150 994690 - 994680 - g 72 -6.8 -4.24745 | GACCATTAAGACAAA GCTG AAC CAGC TGGAGGACGCTGCAG TERM 1151 994808 - 994796 - g 95 -9.1 -4.90455 | opp_overlap 994803, overlap 994798 994803 AGACACTGATAAAAA CCCAG AAC CTGGG AAGAGCCCTGGTTAT TPASS_0915 993952 - 995286 + | hypothetical protein TPASS_0916 995343 - 995471 + | hypothetical protein mgtE 995455 - 996804 + | Mg2+ transport protein TPASS_0918 996819 - 997592 + | hypothetical integral membrane protein trx 997935 - 997618 - | thioredoxin TERM 1152 1000064 - 1000033 - g 73 -9.4 -3.68394 | gap 1, opp_overlap 1000035 1000036 1000039, overlap 1000030 1000036 1000038 GAAAATTATATAGAA CTACAGCGCCAGCGC GGT GCGCTAGCG-TGCTG TGTTCCCCTGTTTGA TERM 1153 1000061 - 1000036 - g 75 -11.9 -2.93113 | gap 1, opp_overlap 1000035 1000036 1000039, overlap 1000033 1000030 1000038 AATTATATAGAACTA CAGCGCCAGCGC GGT GCGCTAGCG-TG CTGTGTTCCCCTGTT TERM 1154 1000060 - 1000038 - g 72 -11.2 -3.00907 | opp_overlap 1000035 1000036 1000039, overlap 1000036 1000033 1000030 TTATATAGAACTACA GCGCCAGCGC GGT GCGCTAGCGT GCTGTGTTCCCCTGT TERM 1155 1000039 - 1000059 + G 77 -12.5 -2.75826 | opp_overlap 1000038 1000036 1000033 1000030, overlap 1000035 1000036 TATATAGAACTACAG CGCCAGCGC GGT GCGCTAGCG TGCTGTGTTCCCCTG TPASS_0920 998158 - 1000587 + | hypothetical protein TPASS_0921 1000695 - 1002032 + | NADH oxidase TPASS_0922 1003059 - 1002166 - | hypothetical protein TERM 1156 1002916 - 1002904 - G 81 -10.5 -3.62224 | overlap 1002905 ACATTCGTGCAAGAA GCGCG CCG CGCGC CGCAGCACGAGCGGG TERM 1157 1002925 - 1002905 - G 77 -12.5 -2.77013 | overlap 1002904 CATTCGTGCAAGAAG CGCGCCGCG CGC CGCAGCACG AGCGGGAATACCTTT TPASS_0923 1004117 - 1003098 - | hypothetical protein TERM 1158 1003344 - 1003368 + g 79 -2.1 -5.252 | gap 1 GTACTTGAGCGACAG GCC-GACATC GGTTGA GAAGTCCGGC TTTTTTATCCCCGTC TERM 1159 1004919 - 1004895 - g 72 -7.8 -3.92869 | gap 1, opp_overlap 1004904, overlap 1004896 CCACGCAGGCAGAAA TCGAGCGC-GC TGCC GCAGCGCTCGT CGCTCCTGCTGCAGA TERM 1160 1004918 - 1004896 - g 75 -11.3 -2.954 | gap 1, opp_overlap 1004904, overlap 1004895 CACGCAGGCAGAAAT CGAGCGC-GC TGCC GCAGCGCTCG TCGCTCCTGCTGCAG tex 1004441 - 1006027 + | protein Tex TERM 1161 1006707 - 1006684 - f 71 -9.5 -3.55444 | CCCTGAGCGCGCAAA GACACGGGG CACATC CCCCGCGCC GGGACAGGATTTCGC TPASS_0925 1007144 - 1007584 + | flavodoxin TERM 1162 1007600 - 1007621 + T 76 -12.3 -3.12847 | GGGGATGTCTTTCCT GAGCCCTTG TAAG CGAGGGCTC TTCCCTATCCCGCTT TERM 1163 1007691 - 1007703 + T 90 -10.5 -4.30933 | CCTGCTGCGCGCCTG GGCGG GTT CCGCC TTTCTTAGCTTTCTC TPASS_0926 1009273 - 1007735 - | possible signal peptidase I TERM 1164 1008351 - 1008363 + g 75 -4.7 -4.85782 | overlap 1008351 1008352 AGCTGTGTGATCTCC CGCGC CCC GCGCA TTTCTTTTTCAAACA TERM 1165 1008464 - 1008492 + g 100 -13.2 -4.57755 | gap 1 CGCCGCCCCCGCGTA CGCGTGCGCTTGG GCAA CCAA-CGCGCGCG TTTTCTCTGCTAAAT TERM 1166 1008549 - 1008516 - G 72 -7.3 -4.17089 | GCTAAATCGCGAAAA TCCACCTGGGCGCGC AGGC GCTCTACCAGATGGA TGGCGGCGAGCTCCT TERM 1167 1009075 - 1009063 - G 70 -5.5 -4.33767 | overlap 1009071 ACAAATTCACCAAAA GCATG AAA CACGC AGCCTGGGTGAGCGC TERM 1168 1009417 - 1009400 - g 95 -12.7 -4.15565 | CGCACGACGCCAAAA GCGCCAG CACG CTGGCGC ACCGTTAGCACATAC TERM 1169 1009874 - 1009860 - g 100 -10 -5.252 | GACGGGTACAAAAAA GTGCAC GAA GTGCAC ATTCACCAATCCCTT TPASS_0927 1009365 - 1009955 + | hypothetical protein TERM 1170 1010390 - 1010376 - g 70 -5 -4.5123 | overlap 1010372 AACCGAGCAAACAAA GCAAAG CGG CTTTAC CCTCAGCGAGGAGCT TERM 1171 1010784 - 1010765 - g 77 -12.8 -2.73875 | overlap 1010762 CTCCTCGGAAGAGGA CGCGCGCC GCAC GGCACGCG CTCTAGAGAAACGGG TPASS_0928 1010050 - 1010790 + | hypothetical protein TPASS_0929 1010802 - 1011572 + | hypothetical protein TERM 1172 1011695 - 1011685 - g 72 -4.6 -4.6955 | opp_overlap 1011682 TATCAAGACACAAAA CGGC TTC ACCG TTCTTTACCGCAACA TERM 1173 1012303 - 1012315 + G 71 -3.3 -4.87291 | TTTTTGTGCCCGCAT GAAGG ACA CCATC TTTTTACTTGCCGTA TPASS_0930 1011596 - 1013317 + | hypothetical protein TPASS_0931 1014831 - 1013401 - | hypothetical protein TERM 1174 1013445 - 1013455 + g 74 -3.2 -4.96848 | TCCCCGAGGGGATTG GGAG CGT CTTC TTTTTCTGTCCAAGG TERM 1175 1014663 - 1014681 + g 71 -3.1 -4.82901 | ATATGATTTCATGCT GACTGAT AATTA ATCCGTC TTTTTCTGGAAACAC TPASS_0932 1014933 - 1014841 - | hypothetical protein murE 1016565 - 1014943 - | UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase TERM 1176 1016493 - 1016510 + g 78 -8.4 -4.15044 | CTATGGAAGAAACGT CGCACG CACTAC CGTGCG TTTCTTGCACAGAAC TERM 1177 1016708 - 1016718 + G 84 -4 -5.24531 | opp_overlap 1016708, overlap 1016694 TCCGCCGCATGAAAA TTTG GCT CAAA TTTTTTGTCGGCAGT TPASS_0934 1016701 - 1017924 + | possible glutamate transporter TERM 1178 1017901 - 1017911 + T 71 -4.6 -4.62441 | overlap 1017890 1017887 GGAACTGTGCGCCAC CGCG CGG TGCG TTTCTTTATCTGAGC TPASS_0935 1018855 - 1017917 - | possible N-acetylphosphinothricin-tripetide-deacetylase TERM 1179 1018347 - 1018336 - G 72 -7.2 -4.1523 | overlap 1018344 CCCAAGGAGAAATAA GCGC CAAA GCGC GCGGACACACCAGCC TPASS_0936 1020122 - 1019049 - | possible hemolysin TPASS_0937 1020929 - 1020294 - | hypothetical protein TPASS_0938 1021756 - 1020926 - | hypothetical protein TERM 1180 1021112 - 1021089 - G 70 -6 -4.20707 | gap 1, overlap 1021110 TCGGAGGAAAAAACA CCCTG-TTCCC GAA GGGAATCAGTG ACATTCGCAAATGCC TPASS_0939 1025375 - 1021821 - | pyruvate oxidoreductase TERM 1181 1024887 - 1024876 - G 76 -3.6 -4.95211 | overlap 1024877 1024880 AAAAAATGAACAAAA GGCA CGCG CGCC TCGAGCGTCGCAGCA TPASS_0940 1025531 - 1025391 - | hypothetical protein TERM 1182 1025502 - 1025514 + g 90 -4.7 -5.40072 | GTGCATCGGCTGCAC GCGGG ACT CACGC TTTTTTTCAAAAAAC TPASS_0941 1026088 - 1025570 - | hypothetical protein TERM 1183 1025921 - 1025899 - G 93 -8.5 -5.0538 | gap 1 CCTGATCCGAAAAAA GCTTA-CCGG TTCT CCGGATAAGC CCCATCTTTTCAACC TPASS_0942 1026629 - 1026165 - | hypothetical protein fliS 1027081 - 1026635 - | flagellar protein TPASS_0944 1028302 - 1027130 - | hypothetical protein cfxE 1029129 - 1028473 - | ribulose-phosphate 3-epimerase TERM 1184 1028572 - 1028528 - G 100 -5 -5.78622 | gap 1 GTACCGGAAAAAAAA GCAGA-GCCTGACACTATCAC ATCC GCACCAGCGTCAAGCGCCTGC GGCAACGTGCGACAG gidB 1029281 - 1029949 + | glucose-inhibited division protein B cyp 1030641 - 1029994 - | peptidyl-prolyl cis-trans isomerase, cyclophilin-binding jag 1031333 - 1030638 - | spoIIIJ-associated protein TERM 1185 1031089 - 1031074 - G 82 -2.4 -5.40625 | ACATGAGATAAAAAA GCACGC AGCT GCGCCC CAAGATCTGCAAACT TERM 1186 1031159 - 1031126 - G 91 -10.9 -4.21811 | CACTCAACACAGAAA CCGGATCGTACTGCG CATG CGCCGCATGACCCGG CGAGGCGGTGACCGC TERM 1187 1031343 - 1031353 + r 86 -6.8 -5.00467 | CACCATACACCGACT CCTG CAT CAGG TTTTATTCTTGTTAG TPASS_0949 1033346 - 1031349 - | membrane protein TERM 1188 1031496 - 1031506 + g 82 -3.2 -5.20216 | CACATAGGTCATAAT CGTC ATG GATG TTTTTTGCTGCTCTG TERM 1189 1033158 - 1033145 - G 77 -6.7 -4.56358 | CAGACGGATACAAAA GTTCC TGAA GGAAC GAAGCTCCCACAAGC TPASS_0950 1033906 - 1033622 - | hypothetical protein TERM 1190 1033674 - 1033700 + g 95 -12.3 -4.18018 | gap 1, opp_overlap 1033674 ACGCCTCTTTTGAAA GCCGTCGTGCGC GATT GCGCGCGA-GGC TTTTCCATAGCCGCG TERM 1191 1033700 - 1033674 - G 74 -10.1 -3.53091 | gap 1, opp_overlap 1033674 ACGCCTCTTTTGAAA GCCGTCGTGCGC GATT GCGCGCGA-GGC TTTTCCATAGCCGCG rpmH 1034065 - 1033910 - | ribosomal protein L34 TPASS_0952 1035222 - 1034185 - | possible lipase TERM 1192 1034516 - 1034533 + g 78 -8.5 -4.1822 | TCATACGACCGTTCA GGATATG CCAA CATATCC TTTGTTCCCGTCAGA TERM 1193 1034911 - 1034896 - G 74 -8.2 -3.91897 | opp_overlap 1034906 CTGTGCAGCCAGAAA GCGCGC TAAC GCACGC TGATAATCTTGCGTG traB 1036494 - 1035304 - | pheromone shutdown protein TERM 1194 1035531 - 1035509 - G 93 -9.8 -4.4448 | AAACCCGTAAACAAA CCCACCCCGA TTA TCGGCGTGAG TACTGCAATTGGCGC TPASS_0954 1038017 - 1036581 - | hypothetical protein TERM 1195 1037509 - 1037458 - G 95 -14.3 -3.54129 | overlap 1037462 TACACCTTCCCCAAA CCTACCCGCGCGTCCTGCGCACG CGGCTC CACGCGCAGCGCGCGCGAGAAAG CCTGCACCGCCTGGG TERM 1196 1037505 - 1037462 - G 95 -15.9 -2.64155 | overlap 1037458 CCTTCCCCAAACCTA CCCGCGCGTCCTGCGCACG CGGCTC CACGCGCAGCGCGCGCGAG AAAGCCTGCACCGCC TERM 1197 1038055 - 1038074 + r 76 -5.6 -4.75954 | overlap 1038057 TGCCGACACCCGCGC GTCGCTGA ATTC TCGGCGTC TTTCTTTTACCTTTT TPASS_0955 1038361 - 1038089 - | hypothetical protein TERM 1198 1038474 - 1038463 - g 72 -5.8 -4.32131 | opp_overlap 1038468 GGAAAAGAAATGAAA CACC CCTC GGTG CGCGTATGCTGCTTT TERM 1199 1038601 - 1038611 + G 70 -6.8 -4.10855 | CTGGACGCGCACCTT TCGG ACG CCGA TTTTACGCGCGTTTT TPASS_0956 1038457 - 1039428 + | hypothetical protein TERM 1200 1039511 - 1039493 - f 76 -3.2 -5.00616 | opp_overlap 1039485 1039493, overlap 1039496 TTCTTGTGTAAAAAA TTACTTTT TGC AAAAGGAA TATCTGTATGCGAAC TERM 1201 1039517 - 1039530 + F 70 -3.1 -4.76041 | GCAAAAGGAATATCT GTATG CGAA CGTAC TTTTTCATGAGTGTC TERM 1202 1039772 - 1039792 + G 81 -8.3 -4.39407 | GTCGTCCTGGTCAGG CAGCTCC TCTTGAT GGAGCTG TTTTCAGTTGTTTAG TERM 1203 1039857 - 1039879 + G 77 -12.2 -2.72461 | overlap 1039856 TACGCTCTCGGTCCC CTTTCTCATT CAA AATGAGAAAG ATTTAGAACGAGTTC TERM 1204 1039962 - 1039979 + G 72 -5.5 -4.56597 | CGTCATCACGTGGAC GAACGCC GGTT GGCTTTC TTTTTACACACGCGC TERM 1205 1040178 - 1040189 + G 70 -3.6 -4.60041 | overlap 1040186 AGTGCATTTGTTCAC CTGG GCAA CCGG TTTTTACCGGTACAT tp33 1039519 - 1040547 + | protein Tp33 TERM 1206 1040918 - 1040935 + G 79 -4.1 -5.1287 | gap 1, overlap 1040921 GCGATCTGTACGGTG GC-AGTGC TCA GCGCTTGC TTTTTTGCGTCTGGA TERM 1207 1041375 - 1041395 + G 84 -7.5 -4.59773 | opp_overlap 1041360 1041358, overlap 1041377 TCCTCACGGATACGG GAGGAATCG TAG CGGTTCCGC TTTTTGCCACTGCAA TERM 1208 1041889 - 1041900 + G 72 -4.4 -4.62336 | CCTGCCAGTGTGTAT TAGC CTGG GCTA TTTTTCCGGTACGCT dctM 1040579 - 1042477 + | dicarboxylate transporter TERM 1209 1042536 - 1042519 - T 81 -6.9 -4.69559 | overlap 1042521 AAAGTTGAAAAGAAA CGCCGCA GGCA TGCTGCG ATCCCCGTTTTATGC TPASS_0959 1042935 - 1042546 - | hypothetical protein TERM 1210 1042898 - 1042850 - G 72 -7.6 -3.90744 | gap 2, overlap 1042853 CGTGCCGCGAAAGAA CCACTACCTTCCATTTTCCCTGTC TTA GACAGGGT-AACGGAAGG-AACAG ACTGCATCCCCAATG flgG1 1043741 - 1042947 - | flagellar basal-body rod protein TERM 1211 1043129 - 1043116 - G 81 -9.5 -4.11484 | opp_overlap 1043114 CCGAATCCTTCAAAA CCCGG CCTT CCGGG AATTGGCTGGCCGGA flgG2 1044632 - 1043817 - | flagellar basal-body rod protein TERM 1212 1044323 - 1044353 + g 71 -9 -3.53224 | overlap 1044327 AAAAACCCATCCCCT CAAGCGCAATATCC GAA GGACTTTGCGTTTG TTTAAGCGAACCCTG TERM 1213 1044327 - 1044349 + g 72 -6.2 -4.41348 | overlap 1044323 ACCCATCCCCTCAAG CGCAATATCC GAA GGACTTTGCG TTTGTTTAAGCGAAC TPASS_0962 1045950 - 1044718 - | hypothetical integral membrane protein TPASS_0963 1047290 - 1046061 - | hypothetical integral membrane protein TERM 1214 1046856 - 1046837 - G 78 -9.3 -3.99374 | opp_overlap 1046854 GTTTACCAAGAATAA CGCTGTG CGTGCC CACAGCG TAACCAATAACGCTT TPASS_0964 1047987 - 1047280 - | ABC transporter, ATP-binding protein TERM 1215 1047510 - 1047538 + g 72 -6.6 -4.15833 | gap 1, overlap 1047511 1047519 TTTTCGGCCGCGTGA CCAGCGCG-CGCG CGAT CGCAACGCGCTGC TTTTGCCCTCCTGAT TPASS_0965 1048949 - 1047987 - | possible membrane fusion protein TPASS_0966 1050608 - 1048974 - | hypothetical protein TERM 1216 1049752 - 1049766 + g 74 -10 -3.55563 | CGTGCGTGCTTGAGC GTTGCG GAG CGCAAC TTTACCGAATGCGCT TERM 1217 1050464 - 1050500 + g 70 -9.9 -3.14132 | CTGAAGCCGTGTGTG CGGGAGGAGCCGGCGTC CCC GGCGCAGGCACTGCCTG TTCCTGCGCACCGAC TPASS_0967 1052208 - 1050655 - | hypothetical protein TERM 1218 1050698 - 1050683 - G 77 -3.2 -5.14682 | opp_overlap 1050683 CCAGAAGAAAGAAAA TCTACG CGCG CGTCGA TGTTAAAAATGAGCG TERM 1219 1051071 - 1051082 + g 70 -5.8 -4.19577 | CGGTGTAACCTATGG CCAG GGCG CTGG TTATTTTGACGCTTG TERM 1220 1051270 - 1051326 + g 81 -5.8 -4.8543 | gap 1, opp_overlap 1051269 1051284, overlap 1051253 CTCGGTGGACACCAG CG-GCATTTCAGGAACGCTTTCAGC CAGCGCGA GCAGAAAGCGCTCCTGATCCGCACG TTTTTCTAAAAATTC TERM 1221 1052044 - 1052078 + g 87 -14.3 -3.07816 | CGTTTCTTGCGCGGC CGCCCGGGCGC-TTGCC GCC GGCGGTGCGCC-GGGCG TTAACTCGCTGGCGG TPASS_0968 1053827 - 1052205 - | hypothetical protein TERM 1222 1052408 - 1052389 - G 79 -10 -3.76373 | gap 1, opp_overlap 1052393 1052394, overlap 1052393 TTGGCAAGATCTAAA CGCA-GCGC CTC GCGCGTGCG CAAGGCGGTTTCTTG TERM 1223 1052393 - 1052416 + g 78 -8 -4.35483 | opp_overlap 1052389 1052393, overlap 1052394 1052414 CAAGATCTAAACGCA GCGCCTCGCG CGTG CGCAAGGCGG TTTCTTGTGCTGCAA TERM 1224 1052394 - 1052415 + g 77 -11.5 -3.20808 | opp_overlap 1052389 1052393, overlap 1052393 1052414 AAGATCTAAACGCAG CGCCTCGCG CGTG CGCAAGGCG GTTTCTTGTGCTGCA TERM 1225 1053102 - 1053082 - G 90 -7.6 -4.83615 | gap 1 GAGTGCTCAGAAAAA CCTGCCGCA CGCG TGCG-CAGG TGCACCAAACGCGCA TPASS_0969 1055443 - 1053824 - | hypothetical protein TERM 1226 1054996 - 1054977 - G 78 -5.7 -4.77438 | opp_overlap 1054985 ACGGAGGAGTAAAAA TCGGTAG TGTAAT CCACCGA CACGGTGGAGGTACT TPASS_0970 1055556 - 1055440 - | hypothetical protein tpd 1056192 - 1055578 - | membrane antigen, pathogen-specific TERM 1227 1056206 - 1056222 + r 72 -11.5 -3.08032 | ATTCTTCACTCCCCT GGGGCGT CAC GCGCCCC TCCTTTTCAAAACGC TERM 1228 1056296 - 1056285 - R 80 -4.4 -5.01422 | TTATAGAAAAACAAA TGGA AATC TCCA CGGCGCAGCACACAC TPASS_0972 1057694 - 1056348 - | hypothetical integral membrane protein TERM 1229 1057475 - 1057434 - G 74 -2.1 -5.03314 | overlap 1057436 CCCACTCTCAAAAAA GGTGTACGCCGCACGTAGA TGTA CCTCCATGCGCTGCACAAC CTGGCGCCAGGAACT TERM 1230 1059113 - 1059138 + G 80 -11.9 -3.31792 | opp_overlap 1059107 1059106 AGAAGGAATCGTACT GGGTACGGATG TGAA CGTCTGTACCC TTCTAGGCATGCTCA pheS 1057782 - 1059443 + | phenylalanyl-tRNA synthetase, subunit alpha TERM 1231 1059494 - 1059481 - T 87 -8.1 -4.66163 | opp_overlap 1059481 ACCCGGACCTAAAAA GCCTG CCTA CAGGC TTATAAATTCTGCTC TPASS_0974 1059776 - 1059495 - | hypothetical protein TERM 1232 1059633 - 1059651 + g 71 -3 -4.87786 | ACGTACCGCCTCCAG GGCCAAGT ACA ACTCAGCC TTTTTCTGGGCTTCC TPASS_0975 1060652 - 1059828 - | hypothetical protein TERM 1233 1060532 - 1060548 + g 79 -12.3 -3.01791 | opp_overlap 1060529 1060526, overlap 1060534 AATGAGACAGGAGCG CACGCGT CCT ACGCGTG TCTTCACAGGCAACT TERM 1234 1060711 - 1060661 - H 95 -14.8 -3.55761 | overlap 1060662 1060665 TACCCACCGCGCAAA CCTACGCACCACCTGTTCCCTTGC GCA ACAAGGAAACAGGTGGTGCTCACT CAGAAAAACTTGGTA TERM 1235 1060710 - 1060662 - H 95 -18.3 -2.73243 | overlap 1060661 1060665 ACCCACCGCGCAAAC CTACGCACCACCTGTTCCCTTGC GCA ACAAGGAAACAGGTGGTGCTCAC TCAGAAAAACTTGGT TERM 1236 1060707 - 1060665 - H 100 -22.2 -2.64472 | overlap 1060662 1060661 CACCGCGCAAACCTA CGCACCACCTGTTCCCTTGC GCA ACAAGGAAACAGGTGGTGCT CACTCAGAAAAACTT TPASS_0976 1060700 - 1062079 + | hypothetical protein TERM 1237 1062518 - 1062494 - g 75 -7.1 -4.3739 | overlap 1062499 1062517 GACGGTGGCAGAAAA CACCACCCCCT CTC AGGAGGCAATG CAGCAGCATGCAGCG TPASS_0977 1062066 - 1062926 + | hypothetical protein TERM 1238 1062985 - 1062995 + G 72 -4.6 -4.60041 | opp_overlap 1062980 1062985 GATACAGAAAGAAAA GTGG ATC CCGC TTTTTGCCGCTGGAT TERM 1239 1062995 - 1062985 - g 74 -2.4 -5.07523 | opp_overlap 1062985, overlap 1062980 GATACAGAAAGAAAA GTGG ATC CCGC TTTTTGCCGCTGGAT lsp 1062923 - 1063516 + | signal peptidase II TERM 1240 1064007 - 1064019 + G 74 -3.3 -4.88067 | overlap 1064008 TACGGTGATAAACGC TCCCA GAT TGGGC TTTTTATCACTCAAT TPASS_0979 1063686 - 1064459 + | hypothetical protein TERM 1241 1065031 - 1064991 - g 77 -12.5 -2.78384 | opp_overlap 1065019, overlap 1064972 1065004 1065005 GCGTGCGGCAGTAGA CGCAGGAGCACAAGCGC TTGCGTT GCACCCGCGCACCTGCG CGCAGTGTTACGCGG TERM 1242 1065206 - 1065216 + G 72 -4.6 -4.64861 | overlap 1065189 TTGCCCGCGGTGCTA TGGG CAA CCCG TTTATTTTCAGACAA TERM 1243 1065307 - 1065285 - g 72 -7 -4.2558 | gap 1, overlap 1065289 GACGTTTGAGCAAAA GCTACGCGC AGCCTG GCGCG-AGC TTCACCTTCTGGCAC ntrB 1064467 - 1065489 + | histidine phosphokinase/phophatase TERM 1244 1065538 - 1065520 - f 71 -4.5 -4.58685 | overlap 1065521 AAACCGCGTGAAAAA CGTACGC TTCCG GCGTACC CCAACTTACTTTGTC TERM 1245 1065865 - 1065881 + G 76 -9.4 -3.71649 | overlap 1065878 AAAAATTGTCTTTGA GCCGCA ATGTG TGCGGC TTTGACGTTTCCCAC TPASS_0981 1065549 - 1066712 + | possible sensory transduction histidine kinase TERM 1246 1066996 - 1066982 - g 81 -7.2 -4.5954 | GCAGACGATAGAAAA GAAGAT GGG ATCTTC TGAAATGCTGTTGTT TERM 1247 1067201 - 1067211 + G 76 -4 -4.91429 | CGCTCCTCTGCTCAT TGTA GGA TACA TTTTGTTTGAAATTT TPASS_0982 1066728 - 1067354 + | possible protein GlpG TERM 1248 1067652 - 1067634 - g 70 -3.7 -4.6313 | opp_overlap 1067634 GCCAAAAGAAAAGAA GCGCGCC GTCAT GGAGCAC TTTACCCTCACTCCC TERM 1249 1067968 - 1067997 + G 81 -9.9 -3.86015 | opp_overlap 1067970 1067971, overlap 1067969 CTATACGTTAAAGAC AATCCCCGCCTCT TTGT AGAGGCGGGGGAA TTTGTCGCAGAGCTC TERM 1250 1067969 - 1067996 + G 82 -13.4 -2.91395 | opp_overlap 1067970 1067971, overlap 1067968 TATACGTTAAAGACA ATCCCCGCCTCT TTGT AGAGGCGGGGGA ATTTGTCGCAGAGCT TERM 1251 1067995 - 1067970 - g 100 -14.7 -3.83347 | opp_overlap 1067969 1067968, overlap 1067971 ATACGTTAAAGACAA TCCCCGCCTCT TTGT AGAGGCGGGGG AATTTGTCGCAGAGC TERM 1252 1067994 - 1067971 - g 100 -18.2 -2.89285 | opp_overlap 1067969 1067968, overlap 1067970 TACGTTAAAGACAAT CCCCGCCTCT TTGT AGAGGCGGGG GAATTTGTCGCAGAG TPASS_0983 1067344 - 1068060 + | hypothetical protein htpG 1070003 - 1068084 - | heat shock protein 90 TERM 1253 1069946 - 1069925 - G 75 -4.5 -4.82901 | opp_overlap 1069917 GTTCCCGGAGAAAAA TCTCTTTAT GGGA ATAGAGAGA ATGGATAATCAACGT TERM 1254 1071244 - 1071254 + G 74 -2.4 -5.15969 | opp_overlap 1071244 CGCTCGAGCACATGA GGCG CAC CACC TTTTTTGGCTTAAGG TERM 1255 1071392 - 1071428 + G 80 -13 -2.52623 | gap 1, overlap 1071391 1071389 1071424 GCCGATTGCCGGCAC CGC-GTGTGCTGCGTCG CACT CGGCGCAGTGCGCAGCG CTCTTATCAGGGACG TERM 1256 1071424 - 1071466 + G 74 -2.7 -4.97158 | overlap 1071392 1071391 1071389 1071429 1071430 ACTCGGCGCAGTGCG CAGCGCTCTTATCAGGG-ACG AGT CGTTCCCAGAGAAG-GAGTTG TTTTCTTTCGTGTGG TERM 1257 1071780 - 1071764 - g 77 -10.1 -3.58801 | overlap 1071766 ACAGAAGCGTTTAAA TACGGCG CGC CGCCGCA CGGCGGCATCGCACA TERM 1258 1071797 - 1071766 - g 83 -12.2 -3.36837 | gap 1, overlap 1071764 AGAAGCGTTTAAATA CG-GCGCGCCGCCGC ACG GCGGCATCGCACACG GGTTGGACCGCCTCG aspS 1070147 - 1071955 + | aspartyl-tRNA synthetase TPASS_0986 1072011 - 1072895 + | hypothetical integral membrane protein TPASS_0987 1073111 - 1072941 - | hypothetical protein TERM 1259 1073270 - 1073284 + G 82 -9.2 -4.18018 | GCACGAAATGGGTAT CTGCGC GCG GCGCGG TTTTACATGCAGCGA TPASS_0988 1073178 - 1074014 + | hypothetical integral membrane protein TPASS_0989 1074922 - 1074050 - | protein P26 TERM 1260 1074381 - 1074395 + g 70 -7.2 -4.11692 | CCATCGCGGTGATCG TAGCTT TCG AAGCTA TTTTCAGGATCGGTA TERM 1261 1074496 - 1074484 - G 76 -7.7 -4.2349 | opp_overlap 1074489 1074491 GCGCGATATGGAAAA GAACG GAG CGTTC AGTGAGATTCTGGGC TERM 1262 1074646 - 1074608 - G 72 -8.6 -3.76224 | CCCTGACGCAGTAAA CACGACGCAGCGCCCCTG AAT CCGAGGCGCTTCCACGCG GGAAATAGACTCGAT TERM 1263 1075457 - 1075443 - g 78 -5.6 -4.82901 | GTGCCCGGAGAAAAA GGTCTC CAG GAGTCC GCCGTGCAGGAGGAA TERM 1264 1077764 - 1077752 - g 72 -4.7 -4.60797 | opp_overlap 1077752 1077753 1077754, overlap 1077753 CCCCCACATAGAAAA GGCGG ACG CCGCG TTTGTTGATTTGTAC TPASS_0990 1074969 - 1078070 + | hypothetical protein TPASS_0991 1078134 - 1078292 + | rubredoxin TERM 1265 1078349 - 1078336 - g 100 -2.3 -5.81412 | overlap 1078337 TCCAGTGAAAAAAAA GGACG CTTT CGTCG GTACGATCGGCTACG TPASS_0992 1078325 - 1078612 + | hypothetical protein TERM 1266 1078673 - 1078635 - T 100 -33.4 -3.01712 | opp_overlap 1078635 CTCCTTTGCTGAAGA TCCTGCACCCCCTCAGGC TTA GCCTGAGGGGGTGCAGGA TTTCCCACTACCAAC TERM 1267 1078635 - 1078673 + T 100 -33.4 -3.57144 | opp_overlap 1078635 CTCCTTTGCTGAAGA TCCTGCACCCCCTCAGGC TTA GCCTGAGGGGGTGCAGGA TTTCCCACTACCAAC TPASS_0993 1079705 - 1078749 - | possible rare lipoprotein A TERM 1268 1080120 - 1080102 - g 77 -6.7 -4.51743 | gap 1, opp_overlap 1080114 TTATCAGGAAAGAAA GGCTCTGC TCCT GCAG-GCC TGCGCGGGGCGCTCG TERM 1269 1080359 - 1080331 - g 79 -10.3 -3.74224 | opp_overlap 1080332, overlap 1080332 1080334 TGCAAAGCACGGAAA GGATCTGGTGTGC GCG GTACACCAGATCT TGATGCAGAGGAGTA TERM 1270 1080358 - 1080332 - g 86 -13.8 -2.84053 | opp_overlap 1080332, overlap 1080331 1080334 GCAAAGCACGGAAAG GATCTGGTGTGC GCG GTACACCAGATC TTGATGCAGAGGAGT TERM 1271 1080332 - 1080358 + G 100 -16 -3.14211 | opp_overlap 1080332 1080331 1080334 GCAAAGCACGGAAAG GATCTGGTGTGC GCG GTACACCAGATC TTGATGCAGAGGAGT TERM 1272 1080356 - 1080334 - g 71 -10.6 -2.96232 | opp_overlap 1080332, overlap 1080332 1080331 AAAGCACGGAAAGGA TCTGGTGTGC GCG GTACACCAGA TCTTGATGCAGAGGA TPASS_0994 1080061 - 1080870 + | hypothetical protein TERM 1273 1081063 - 1081038 - g 75 -12 -2.98942 | opp_overlap 1081029 1081042 1081044, overlap 1081040 ACGCGTGGATATACA CATTCAGACG CTCTCT CGTCTGAATG AGATAGCATCCGTTT TERM 1274 1081042 - 1081075 + G 75 -4.5 -4.74103 | opp_overlap 1081040 1081038, overlap 1081029 1081044 GTGGATATACACATT CAGACGCTCTCTCGT CTGA ATGAGATAGCATCCG TTTTTCGCTTCGAGA TERM 1275 1081789 - 1081772 - g 71 -2.7 -4.84359 | overlap 1081782 GTATGGGCATAAAAA TGACAGA AATT TTTGTCA AAAGGCTCAGCTATA TPASS_0995 1080946 - 1082232 + | cyclic nucleotide binding protein TPASS_0996 1083931 - 1082315 - | hypothetical protein TERM 1276 1082755 - 1082738 - G 72 -4.9 -4.63218 | CGGCTCCCAACAAAA TCCTATG TCCC CATAAGA AGGCAACAGCACCAC TERM 1277 1084110 - 1084057 - R 76 -9 -4.01158 | gap 3, opp_overlap 1084093 1084105, overlap 1084054 AACCGTAGCAAACAA CGCTGCGCTCG-ATCAAGCGTAG-CAG TGC CCGTCAACGCC-AATGCAAGCGCAGCG GCTCATATACGTAGG sppA 1085884 - 1084088 - | protease IV TERM 1278 1085638 - 1085626 - G 76 -7.7 -4.14977 | opp_overlap 1085625 1085626 TAATATCAGAAAGAA GGATC GCC GATCC CTTTGGGTTCAAGAA TPASS_0998 1087420 - 1085918 - | sodium/proton-dependent alanine transporter TERM 1279 1086182 - 1086172 - G 70 -5.4 -4.35581 | opp_overlap 1086172 TGAAAACACTCAAAA CCAT TTT ATGG TCCTTAATGAAACGT TERM 1280 1086387 - 1086375 - G 70 -4.1 -4.71186 | AGCAGCAACACAAAA GCAGT CAC ACTAC AAATTAGCATCGTGT TERM 1281 1086622 - 1086602 - G 77 -3.1 -5.12707 | overlap 1086604 GCAAATTTCAAAAAA GAGCGCAGG GAG CCTGTACAC ATTGAGTGCCAACAC TERM 1282 1087003 - 1086989 - G 72 -7.8 -3.86897 | CGTACTTTCGACAAA GGCACT TGC AGCGCC AAAAAAGGCACTCAC TERM 1283 1088123 - 1088142 + G 81 -5 -5.04601 | gap 1, opp_overlap 1088091 1088090, overlap 1088091 1088117 AATTCTCCACGGAAG TTC-CCCTC CAG GGGGGAGAA TTTTTGATTTCTGAG TERM 1284 1088787 - 1088773 - g 91 -11.4 -4.08767 | CCCATTCCTGGAAAA CACGCC ATA GGCGTG GAAGTCCCTAACAAA TERM 1285 1089077 - 1089056 - g 75 -5.2 -4.67353 | overlap 1089058 TCATTGATCCAAAAA TCGTAGAG TTAAAG CTCTACAA CGATATCGCCCACCT TERM 1286 1089247 - 1089236 - g 79 -2.2 -5.28755 | AAATACAGGAAAAAA GCAT CGCC ACGC AGCCTCTCCCATTCA TPASS_0999 1087492 - 1089891 + | possible cell division protein TERM 1287 1089937 - 1089918 - f 71 -4.2 -4.63218 | opp_overlap 1089883 1089930, overlap 1089922 CTGCGTGTAAGAAAA CGACGAAC GATT GTTCAACG GACTTTTTGAAACTG TPASS_1000 1090069 - 1090740 + | hypothetical protein TERM 1288 1090891 - 1090906 + T 90 -4.7 -5.40072 | AGAGCTATTGATTTG GCAAC CCCATC GTTGC TTTTTTTAGCACAAA TPASS_1001 1092061 - 1090880 - | hypothetical protein TERM 1289 1090939 - 1090923 - G 77 -7.3 -4.46212 | opp_overlap 1090931, overlap 1090928 TTTTTTAGCACAAAA CAATCTG CCG CAGATCG GCCTGCGCCCCGTTT TERM 1290 1091087 - 1091120 + g 74 -2.3 -5.09895 | gap 1, overlap 1091088 GGCAGCTTCAATTTC TGGAAAAGC-CCAGCG AAA CGTCGGCGCCTTTCCC TTTTTTACGTGGGTA TERM 1291 1091599 - 1091615 + g 70 -5.7 -4.36914 | CACGCAATACCACCT GCTGCCC CAC GTGCGGC TTTTGTAAAAAGCGC TERM 1292 1092018 - 1092005 - G 72 -4.5 -4.72272 | opp_overlap 1092005 CTCCCTCACCAAAAA TAGGC TAAC GCCCA TTATATCACACGTAA TPASS_1002 1092743 - 1092075 - | hypothetical protein TERM 1293 1093656 - 1093644 - g 90 -4.7 -5.4505 | overlap 1093645 1093652 CTGGTGAAGAAAAAA CGCTC AAA GTGCG CAGCTCCGCCCACAG TERM 1294 1093717 - 1093744 + G 73 -4 -4.82901 | GAACTTCACGTTCTA CTACGGGAGTCA CGCG TGGCACCGGTGG TTTTTCTGGACAACG TPASS_1003 1092938 - 1093975 + | hypothetical protein recR 1094603 - 1093998 - | recombination protein RecR dnaZX 1096395 - 1094677 - | DNA polymerase III, subunits gamma and tau gyrB 1098367 - 1096454 - | DNA gyrase, subunit B TERM 1295 1097293 - 1097279 - G 77 -10 -3.63922 | overlap 1097277 ATTTTGCTCAAAATA GAGCGT CAG ACGCTC CCCCACCAAAGAATC thyX 1099393 - 1098476 - | thymidylate synthase-complementing protein TERM 1296 1098752 - 1098736 - G 79 -2.3 -5.25735 | GCAAAAAATGAAAAA GATTG TGTAAAT CAATC TGCCAATACCACTCG TERM 1297 1098840 - 1098853 + g 78 -9.5 -3.97834 | opp_overlap 1098830 1098831 ATCAATGCGTCGTAA GCGGC ACAC GCCGC TTTCTGCTGAGCTTC nrdA 1101973 - 1099436 - | ribonucleoside-diphosphate reductase, subunit alpha TERM 1298 1099704 - 1099717 + g 81 -6.7 -4.72007 | opp_overlap 1099695 GAAGGAGCTACGCGT GGCAT TAGC ATGCC TTTCTTTTCCTCGAG TERM 1299 1101475 - 1101460 - G 79 -10.4 -3.72027 | opp_overlap 1101459 AGCGCGCAGCAATAA GCTCCC ACTG GGGAGC CTCTTGGGCAGTCAG gpsA 1103170 - 1102100 - | glycerol-3-phosphate dehydrogenase TERM 1300 1102309 - 1102295 - G 72 -6.4 -4.4009 | opp_overlap 1102274, overlap 1102278 1102300 CTGTATTCCAGAAAA GGAATC AAG GATCCC CTTATGCACTATGTC ndk 1103716 - 1103267 - | nucleoside-diphosphate kinase pth 1104450 - 1103842 - | peptidyl-tRNA hydrolase TERM 1301 1104220 - 1104208 - G 70 -4.8 -4.56775 | ATCCGTCTGCAAAAA GGCA CATGC TGCC CCTACGCTTTTCCCA sigA 1105420 - 1104485 - | RNA polymerase sigma-43 factor TERM 1302 1105226 - 1105211 - G 75 -6.8 -4.35091 | opp_overlap 1105222, overlap 1105212 AACACTGATAACAAA GCGTAC GTTT GCACGC ACGAGCGCGTTTTTA TERM 1303 1105222 - 1105235 + g 73 -3.7 -4.74103 | opp_overlap 1105211 1105212 CAAAGCGTACGTTTG CACGC ACGA GCGCG TTTTTAGCTTGCGCA groES 1105625 - 1105891 + | chaperonin GroES TPASS_1014 1107836 - 1105902 - | hypothetical protein TERM 1304 1106123 - 1106134 + gT 70 -3.6 -4.64676 | overlap 1106099 CAAGCACAAAGTGTT CTGC AGCC GCGG TTTTCTTGCCCATCC TERM 1305 1106837 - 1106824 - GT 78 -5.9 -4.72986 | opp_overlap 1106824 TACGCGTACCAAAAA GCACG TGCA CGCGC TCTATCCCCTCCATC TERM 1306 1106870 - 1106857 - GT 74 -9.5 -3.64703 | TCCCCTCCATCGAAA GCGGC ATCT GCCGC TAACAGCAAGTGAGT nusB 1108227 - 1107802 - | N utilization substance protein B tpn39b 1109309 - 1108224 - | basic membrane protein TERM 1307 1108315 - 1108328 + g 77 -3.1 -5.16151 | gap 1 GACACTTCCCGGATA GCG-TC CTC GAGCGC TTTTTGTTGGATTTG TERM 1308 1109123 - 1109139 + g 93 -12.3 -3.9578 | CCATGAATTGTCTAC GCTCAGC AGT GCTGAGC TTCTTTCCCATCTCT alaS 1111199 - 1109382 - | alanyl-tRNA synthetase TERM 1309 1110092 - 1110111 + g 86 -12.2 -3.56092 | CCTTCCTGAGGGCGT CGAGGAAC TTAC GTTCCTCG TTTGCAAGCTCCTGC TERM 1310 1111098 - 1111082 - G 81 -6.5 -4.78107 | CAGCAGTAGTAAAAA GCACGGT AGG ATCGTGC TCGGGCACAAGGGAC TERM 1311 1111541 - 1111529 - g 71 -2.7 -4.74504 | AGCTGAATCCAAAAA GAAAA GCA TTCTC CTTGAAGCAAAAGAA TERM 1312 1111658 - 1111647 - g 74 -5.8 -4.56597 | CGCCTTCTTCAAAAA GAGG AAGC CCTC TCTACGCGCGCGGGG TERM 1313 1111723 - 1111704 - g 74 -7.8 -4.12902 | opp_overlap 1111708 GAACGATCGCTAAAA CAGCGGGA TCAG TCCCTCTG TCAAGAAGAGGCCCG TERM 1314 1112770 - 1112758 - g 75 -5.5 -4.61747 | TGAACAACGATAAAA TCCCC GAC AGGGA CGTGAAGGCACTTGG TPASS_1018 1111371 - 1112885 + | hypothetical protein gatC 1112907 - 1113350 + | glu-tRNA amidotransferase, subunit C TERM 1315 1113734 - 1113748 + G 73 -11.4 -2.62983 | CACCGTTGTTGCGCG CCTGCG CGC CGCAGG TGCTATCCCGCTCGG TERM 1316 1114145 - 1114177 + G 73 -4 -4.82901 | overlap 1114144 CCCCCCTCCTGCGAC GGGGCGACACGCTG TGTCT CACCATCTTGCCCC TTTTTCTGCCCACGA gatA 1113351 - 1114871 + | glu-tRNA amidotransferase, subunit A TERM 1317 1115343 - 1115327 - g 78 -8.7 -4.20084 | AGGACGCAGGCAAAA GCCTGCA TGC TGCAGAC GCTTACAGCTATATT gatB 1114864 - 1116393 + | glu-tRNA amidotransferase, subunit B sms 1117856 - 1116489 - | DNA repair protein TERM 1318 1117049 - 1117026 - G 91 -3.1 -5.5112 | gap 1, overlap 1117028 GGTACTAATAAAAAA TCCTGCAGTG TCCTG CACAGC-GGA AAGTCCATTTTCACC TERM 1319 1117666 - 1117643 - G 71 -9.6 -3.4878 | gap 1, overlap 1117645 CGATACCACAACTAA TACGCTGCGCA TCC TGCGC-GCGCA CAGCACACAGCGGGA TERM 1320 1117664 - 1117645 - G 72 -10 -3.31184 | gap 1, overlap 1117643 ATACCACAACTAATA CGCTGCGCA TCC TGCGC-GCG CACAGCACACAGCGG recX 1118397 - 1117903 - | protein RecX rpsI 1118914 - 1118525 - | ribosomal protein S9 rplM 1119358 - 1118930 - | ribosomal protein L13 TERM 1321 1121521 - 1121540 + G 74 -10.7 -3.1506 | AACACTCGCTTCCTG CCGTGCG TATTTT CGCACGG TTGGTGACCGCCTTT TPASS_1026 1119791 - 1121560 + | possible oligoendopeptidase F TERM 1322 1122250 - 1122228 - g 70 -4.1 -4.68424 | overlap 1122230 GAACTCACGCAAAAA TGGCACGCA TGGAT TGCATGCAA CACACTCGCATCCGA udp 1121682 - 1122458 + | uridine phosphorylase uvrD 1124486 - 1122474 - | DNA helicase II TERM 1323 1123559 - 1123572 + g 100 -3.1 -5.81412 | CAATCAGCGCCTTTC CTAAG CGGT CTTGG TTTTTTTTCACTACC TERM 1324 1124276 - 1124297 + g 70 -6.5 -4.2461 | gap 1, opp_overlap 1124264 CAAGCGCGCAGGCAC GCGTGCGCAT CTC ACGCGC-CGC TTTATTGGTAAAGGT TPASS_1029 1125255 - 1124569 - | hypothetical protein TERM 1325 1125147 - 1125132 - G 74 -6 -4.56597 | overlap 1125134 CGCTCTTGCGAAAAA GGCGCC GATA GGCGTC GAGCACGCGGGGGTC TERM 1326 1125153 - 1125170 + g 85 -6.9 -4.84529 | GATAGGCGTCGAGCA CGCGGGG GTCT TCCTGCG TTTTTACGTTTCTGA TERM 1327 1125348 - 1125313 - R 100 -13.2 -4.25104 | gap 1 GCGGTGCCATGAAAA CGGGCA-CGTGCGCTGC GCT GCAGCGCGCGGCGCACG GGGCGATACAAAACT TERM 1328 1125438 - 1125393 - R 75 -11.8 -2.91452 | gap 1, opp_overlap 1125425 AGGATTGCAAGTATA GCGCGCCCC-CACCCCCCT GTCTACCTG AGGAGGGGGCGGGGCGTGC GGCGGTGACGCCACC TPASS_1030 1125772 - 1125413 - | hypothetical protein TERM 1329 1125535 - 1125551 + g 100 -5.1 -5.60993 | opp_overlap 1125537, overlap 1125537 AATGGGTCGGGAGGG AACTGCA CCG TGCAGTC TTTTTTTGTGCGGGC TERM 1330 1125537 - 1125549 + g 82 -7.7 -4.45201 | opp_overlap 1125537, overlap 1125535 TGGGTCGGGAGGGAA CTGCA CCG TGCAG TCTTTTTTTGTGCGG TERM 1331 1125626 - 1125665 + g 83 -12.1 -3.27525 | opp_overlap 1125639 TGAGCAGCTAGGCAT TGCCCCGCAGTAACTGG TCACGC CCAGCTGCAGTGGGGCA TTAAGTTTAAAAAGA TERM 1332 1126323 - 1126300 - g 86 -6.6 -4.94902 | overlap 1126291 CAATGAGCAGAAAAA CCGCCTGC TGTGGAGC GCCGGCGG ACGGCTGACGCTGAC TERM 1333 1126545 - 1126532 - g 74 -3.1 -5.00616 | gap 1, overlap 1126533 TTTTTTGTCAAAAAA GT-GCG GGG CGCTAC CCTCATACAGCAAGT tprL 1125800 - 1127344 + | protein TprL TPASS_1032 1127846 - 1127412 - | hypothetical protein TERM 1334 1127539 - 1127581 + g 78 -9.2 -3.87583 | gap 3 GCGATGCACGTGCCG TTCGCGCACGGCGAGCGGCAC ACCC GGGCTGC-C-CCG-GCGCGAA TTTCAATTTCCGTTT TPASS_1033 1128793 - 1127858 - | hypothetical protein TPASS_1034 1128867 - 1129892 + | hypothetical integral membrane protein valS 1132759 - 1129889 - | valyl-tRNA synthetase TERM 1335 1131216 - 1131228 + g 76 -9.1 -3.72576 | GTGGGGTAAAACGCG CGCAG CTT CTGCG TTTCCTGAGGCCACC TERM 1336 1133920 - 1133949 + G 74 -10.8 -3.14132 | opp_overlap 1133920, overlap 1133906 ATTCCGGTAGAAAAA GGACGCGGAGAT TCCGTC ATTTCTGCGTCC TTAGTCAGCACGGGG TERM 1337 1133949 - 1133920 - g 81 -6.4 -4.83169 | opp_overlap 1133920 1133906 ATTCCGGTAGAAAAA GGACGCGGAGAT TCCGTC ATTTCTGCGTCC TTAGTCAGCACGGGG TPASS_1036 1132912 - 1135290 + | cation-transporting ATPase, P-type TERM 1338 1135370 - 1135350 - T 74 -9.8 -3.75884 | opp_overlap 1135349 1135350 1135361, overlap 1135346 GCGCAAAGAAACGAA CCTCCTAT CTATC ATAGGAGG CTTATGGATTTAAAA hlyIII 1136096 - 1135380 - | hemolysin III TERM 1339 1136186 - 1136154 - R 71 -10.6 -3.24825 | opp_overlap 1136153, overlap 1136152 GCACTTCAACCAACA CCTCCCTCCCCTCA TGCTG TAACGGGAGAGAGG CCTTATGTGCAAAAT tpF1 1136788 - 1136255 - | bacterioferrin TpF1 TERM 1340 1136732 - 1136761 + g 93 -3.5 -5.51402 | gap 1, overlap 1136734 1136736 1136737 GGGGGCGCTGGCTCC AACTGCAGCGCTCG TGG CG-GTGCTGTGGTA TTTTTTTCCATCTGT TERM 1341 1136734 - 1136759 + g 72 -6.1 -4.38666 | gap 1, overlap 1136732 1136736 1136737 GGGCGCTGGCTCCAA CTGCAGCGCTCG TGG CG-GTGCTGTGG TATTTTTTTCCATCT TERM 1342 1136926 - 1136950 + H 86 -6.6 -5.00616 | gap 1, overlap 1136918 ATTTATTTTCACCGA GATTTCG-TGA AGTT TCAGCGAAATC TTTTTTCCAGGAGAC apt 1137015 - 1137587 + | adenine phosphoribosyltransferase lysS2 1138665 - 1137610 - | lysyl-tRNA synthetase TERM 1343 1138469 - 1138458 - G 81 -5.8 -4.82901 | GCGGTTTCAGAAAAA CCTC AGGA GAGG GAACGAGATATAACT TERM 1344 1138642 - 1138613 - G 93 -6.3 -5.26875 | overlap 1138614 TGTTCAAGGAAAAAA TCACGCACTGCAC GCAA GCACTGCGCGCGA AAGAGGACAGATTCG clpP2 1139378 - 1138665 - | ATP-dependent Clp protease proteolytic component TERM 1345 1138800 - 1138828 + g 72 -6 -4.38712 | opp_overlap 1138810, overlap 1138801 CACACCCGTTTCACT TGCGATCAAAGC GTTCA GTTTCGATCGCG TTTTCTCAAGCTCCC TERM 1346 1138975 - 1138958 - G 76 -7.7 -4.25104 | TTGCCGCGAGCAAAA CGAGTAC ACCA GCACTCG CAACCAACCCCATTC