TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.535065 %AT, 774283 nt, 5904 terms. Intergenic: 0.544805 %AT, H2T: 183103 nt, 807 terms; T2T: 41338 nt, 584 terms; H2H: 59295 nt, 543 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|32447382|ref|NC_004572.3| Tropheryma whipplei str. Twist, complete genome (length 927303) dnaA 1 - 1437 + | chromosomal replication initiator protein dnaN 1767 - 2900 + | DNA polymerase III subunit beta TERM 1 3113 - 3100 - g 72 -6.7 -4.27117 | TCGGGAGAACAGAAA GCAGA GATA TCTGC AAAAATTCAGTCTAA recF 2890 - 3981 + | recF protein TWT004 4011 - 4445 + | hypothetical protein TERM 2 4897 - 4911 + G 72 -5 -4.57341 | overlap 4907 TGTATGTTGAGGTCT CAAGAC AGG GTTTTG TTTTTAGACAAAATT TERM 3 5217 - 5202 - g 80 -6.2 -4.78839 | AACCGCATAAGAAAA CATGAA CCTC TTCATG AAGAAATAATTCACT TERM 4 5556 - 5573 + G 73 -9.9 -3.37466 | overlap 5554 GAAATGCGTGGCTAT GTTCACC ACGA GGTGAAC TCTTATCTGTGGGAT gyrB 4485 - 6434 + | DNA gyrase subunit B TERM 5 8544 - 8556 + G 71 -7.7 -3.90744 | AACGATCTCCTTCTT TCAGC TGA GCTGA TTCTTTCGGACGACA gyrA1 6438 - 8897 + | DNA gyrase subunit A TERM 6 8929 - 8942 + G 70 -9.5 -3.09933 | opp_overlap 8905 8918, overlap 8919 AAGCTCCTCCTCACA GGCGG TTCT CCGCC TTGGGTCGATTAACG TWT007 8894 - 9274 + | hypothetical protein TWT008 10341 - 9640 - | hypothetical protein TWT009 10457 - 11095 + | hypothetical protein TWT010 11342 - 11133 - | putative septation inhibitor protein pabA 11399 - 12037 + | para-aminobenzoate synthetase component II TWT012 12143 - 12715 + | hypothetical protein TWT013 12752 - 13627 + | putative protease HtpX TWT014 13628 - 13999 + | hypothetical protein TWT015 14119 - 15402 + | hypothetical protein TERM 7 15907 - 15889 - g 82 -5.9 -5.19275 | opp_overlap 15894, overlap 15892 15894 ATCGATAAAATAAAA GAAGCGG GCTTT CCGCTGC CCTCTGTAAACCAAA TERM 8 15904 - 15892 - g 78 -6.2 -4.66746 | opp_overlap 15894, overlap 15889 15894 GATAAAATAAAAGAA GCGG GCTTT CCGC TGCCCTCTGTAAACC TWT016 15427 - 16278 + | 2,5-diketo-D-gluconic acid reductase pmmB 18046 - 16394 - | phosphomannomutase TERM 9 17249 - 17262 + g 83 -4.5 -5.27779 | opp_overlap 17234 17249 CGGCAAGGTTGGAAA TGCCG GGTC TGGCA TTTTTTGCTCTTCAA deoD 18943 - 18059 - | purine nucleoside phosphorylase TWT019 18949 - 20370 + | flavoprotein disulfide reductase bccA 22214 - 20439 - | biotin carboxylase TERM 10 20692 - 20711 + g 78 -5.7 -4.85433 | gap 1 TGTCTGAAATTGTGC CCTACCCG CCTGC CGGG-AGG TTTTTGCCTTTCTGT TWT021 22687 - 23139 + | hypothetical protein TERM 11 23197 - 23212 + G 71 -6.8 -4.11216 | GCACTAATTATTTAT CTGGCA TTTG TGCCGG TTTTGACAGTAGCCG TWT022 23155 - 23550 + | hypothetical protein pccB 25663 - 24086 - | propionyl-CoA carboxylase beta chain TERM 12 25437 - 25413 - G 74 -7.1 -4.19817 | opp_overlap 25413 25429 25431 TCTATTGAGCCAAAA CCTGTGACGAC AGA GTCGCCATAAG GGTGGTTTTTTTCGA TERM 13 25431 - 25442 + g 79 -2.2 -5.47218 | opp_overlap 25413, overlap 25413 25429 GTGACGACAGAGTCG CCAT AAGG GTGG TTTTTTTCGATACCA birA 25725 - 26471 + | biotin acetyl-CoA carboxylase ligase TWT025 27009 - 26548 - | hypothetical protein TERM 14 27176 - 27186 + GH 76 -8.2 -4.12188 | overlap 27171 AGTTCAGCAGCCCTT GCCG CAA CGGC TTTTGGCAGTCCTGA purK 26789 - 28243 + | phosphoribosylaminoimidazole carboxylase ATPase subunit TERM 15 28346 - 28336 - g 74 -5.4 -4.60487 | TATGACTGGTAAAAA CATC AAC GATG AAGGTAGCAAATGCC purE 28322 - 28864 + | phosphoribosylaminoimidazole carboxylase catalytic subunit TERM 16 29041 - 29026 - T 71 -3.9 -4.90381 | overlap 29036 29039 TGTAACACAATAAAA CCGCG TAACAG CACGG CACGGTGCCCCAAGA TWT028 29511 - 29089 - | hypothetical protein rmlD 30678 - 29815 - | dTDP-4-dehydrorhamnose reductase rmlB 31658 - 30675 - | dTDP-glucose 4,6-dehydratase rmlC 31903 - 32526 + | dTDP-4-dehydrorhamnose 3,5-epimerase rmlA 32582 - 33460 + | glucose-1-phosphate thymidylyltransferase wbbL 34316 - 33468 - | glycosyl transferase TERM 17 34103 - 34116 + g 74 -3.7 -5.00895 | CCGCATTGACCGCTG CGCCG TATC CGGAG TTTTTCTCTAGTGCG TERM 18 34304 - 34292 - G 70 -9.1 -3.31263 | opp_overlap 34290 ATGTTACGGTTATAA GCTCG AAT CGAGC GATCATTGTCATTGA TWT034 35119 - 34313 - | ABC transporter ATP-binding protein TERM 19 34572 - 34543 - G 71 -3.5 -4.80178 | overlap 34544 34545 CATCAATCAACAAAA GGTCTGGGTCTGT ATGT ACAGACACAGAAA ACGCAAGTCGCATAT TERM 20 34570 - 34545 - G 71 -10.5 -2.67129 | overlap 34544 34543 TCAATCAACAAAAGG TCTGGGTCTGT ATGT ACAGACACAGA AAACGCAAGTCGCAT TWT035 36064 - 35171 - | ABC transporter permease protein TERM 21 36091 - 36110 + H 71 -8 -3.98826 | opp_overlap 36082 TACAAAGACAGACGG TCTATCAT TACA ATGATAGA TTTATAAGTTGGTAA TWT036 36127 - 37098 + | glycosyltransferase TWT037 37646 - 37206 - | hypothetical protein TERM 22 37566 - 37551 - GT 75 -2.6 -5.15117 | gap 1, opp_overlap 37555 37562, overlap 37554 37555 TAAAATGCCAAAAAA GTACGAT GTC ATCG-AC AGCCTTTCGACTTTC TWT038 38287 - 37559 - | glycosyltransferase TERM 23 38518 - 38506 - H 72 -5.5 -4.4715 | overlap 38507 GTCGAATTTATAAAA CTACC GTC GGCAG ACTGGTAACACAAGC TERM 24 38741 - 38715 - g 89 -4.2 -5.63645 | opp_overlap 38718, overlap 38718 38719 GCAAAATAGAAAAAA GTAGCGCCGCCG GGG CGTCGGGACTGC GACGATTGCGCCTGG TERM 25 39220 - 39234 + G 72 -8.5 -3.79251 | overlap 39232 TCTTGCATTGCCGCA GCCGC GCAGG GCGGC TTTGCTGATCACATG TWT039 38645 - 40486 + | hypothetical protein TWT040 41337 - 41846 + | hypothetical protein TERM 26 42108 - 42127 + F 70 -9.4 -3.43109 | opp_overlap 42110 42112, overlap 42106 42124 TATTCTTGTGCTCAA GATACATC AGTT GATGTATC TGTTTAGATAATATG TERM 27 42474 - 42496 + G 79 -12.8 -2.80511 | opp_overlap 42480, overlap 42467 42478 GCGACCTTTGCTGCC GTAACAGCAG GGA CTGCTGTTGC TGATTGCGTTATGCA TERM 28 42478 - 42492 + G 71 -10 -3.28984 | opp_overlap 42480, overlap 42474 42467 CCTTTGCTGCCGTAA CAGCAG GGA CTGCTG TTGCTGATTGCGTTA TWT041 42390 - 42596 + | hypothetical protein TWT042 42593 - 42991 + | hypothetical protein TWT043 43118 - 43429 + | hypothetical protein TERM 29 44061 - 44084 + G 74 -10.2 -3.14881 | opp_overlap 44051 44052 TAAAAGGTGCGCGCT TCGCGGGCCC TATC GGGACTGCGA TTGGTACCAGCATTG TWT044 43793 - 44224 + | hypothetical protein TWT045 44228 - 44617 + | hypothetical protein TERM 30 44633 - 44665 + T 74 -10.6 -3.12895 | opp_overlap 44632 44631, overlap 44633 AGATAAACACACATT GGGGCAAGACGG CTACACGCC CCGTCTTGCCCA TCTCTTGCTGCCAAG TWT046 46218 - 44764 - | two-component system sensor histidine kinase TWT047 46977 - 46222 - | two-component system response regulator TERM 31 46427 - 46451 + g 71 -10.1 -3.1996 | opp_overlap 46426 46425 AAGTACCGCAGAAGT TTGAACTCAGT TGG ACTGAGATCAA TTAGGTTACCCTTTA capB 47170 - 47547 + | cold shock protein B soj 47875 - 48657 + | putative sporulation protein Soj TERM 32 48873 - 48898 + G 76 -8.3 -4.03413 | ATATTTCGATTGGCC CGCCAAATCAG AATC CGGATTTGGTG TTTGTATGCACACCT tyrA 48731 - 49867 + | prephenate dehydrogenase TWT051 49849 - 51909 + | bifunctional cytidylate kinase/GTP-binding protein menF 53210 - 51906 - | isochorismate synthase ubiE 53279 - 53998 + | ubiquinone/menaquinone biosynthesis methyltransferase TERM 33 54011 - 54025 + G 72 -2.8 -4.9792 | overlap 54013 TAGCAAACCCGTACA TGCTTG TGT CAGGTA TTTTTCTGTCCGATA TERM 34 54554 - 54580 + G 76 -7.9 -4.21194 | AGACAGGTTCTTTAA TCGCCGCATCC GCTCA GGTTGGGGCGA TTTTAGGTGATGCCA grcC 54010 - 55026 + | heptaprenyl diphosphate synthase component II TERM 35 56381 - 56334 - g 100 -20.2 -4.80396 | gap 1, opp_overlap 56335, overlap 56335 56338 TAAAACACGTAAAAA GGTAGTTCCACGGGAAGAAATGT ATT ACATTTCTTCCCGTGGAAGC-CC TTCGTAAAAGAGGCA TERM 36 56335 - 56381 + G 100 -18.2 -3.14132 | opp_overlap 56334 56335 56338 AAAACACGTAAAAAG GTAGTTCCACGGGAAGAAATGT ATT ACATTTCTTCCCGTGGAAGCCC TTCGTAAAAGAGGCA TERM 37 56381 - 56335 - g 100 -20.4 -3.46611 | opp_overlap 56335, overlap 56334 56338 AAAACACGTAAAAAG GTAGTTCCACGGGAAGAAATGT ATT ACATTTCTTCCCGTGGAAGCCC TTCGTAAAAGAGGCA TERM 38 56378 - 56338 - g 100 -22.9 -2.85763 | opp_overlap 56335, overlap 56334 56335 ACACGTAAAAAGGTA GTTCCACGGGAAGAAATGT ATT ACATTTCTTCCCGTGGAAG CCCTTCGTAAAAGAG TWT055 55045 - 56388 + | ferredoxin--NADP+ reductase TERM 39 56403 - 56391 - T 71 -6.9 -4.08064 | AAGCCCTTCGTAAAA GAGGC AAT GCCCC AGGATGATATGATGC fecB 57699 - 56728 - | iron (III) dicitrate ABC transporter substrate-binding protein TWT057 58839 - 57844 - | iron ABC transporter substrate-binding protein TERM 40 58358 - 58393 + g 79 -4 -5.17353 | gap 1, overlap 58354 58353 TGCCTTTGCTGATCC CTCCAGGGAAT-CTGGT ATG GCTGGTAGTCCTTGGAG TTTTTTGGTCCATAT fepC 59890 - 59057 - | iron ABC transporter ATP-binding protein fepG 61013 - 59826 - | iron ABC transporter permease protein fepD 61831 - 60866 - | iron ABC transporter permease protein TERM 41 61831 - 61819 - GH 74 -3.3 -5.01042 | overlap 61820 AACTCAAACGAAAAA CTGGC CCT GCCAC ACATTTCAGGCTATC TERM 42 62309 - 62297 - g 82 -6.9 -4.7497 | overlap 62298 CTTATCTAGGAAAAA CGCGC AGA GCGCA GAAAAACTTTTCAAA TWT061 62223 - 62570 + | transcriptional regulator lysK 64503 - 62866 - | lysyl-tRNA synthetase TERM 43 63263 - 63225 - G 80 -12.4 -2.94218 | opp_overlap 63222 ATTTTTTACTATAGA TCCTTGCGCAGCTCAATC TTG GCTCGAGTTGCGCAAGGG ACCTAATATCAGGGC TERM 44 64661 - 64677 + G 75 -10.1 -3.64703 | AGGGCATTTGTGCTG GTCCCCA CCA TGGGGGC TTTGCATGAGGGACA panC 64592 - 65458 + | pantoate--beta-alanine ligase TERM 45 66451 - 66473 + G 78 -5.6 -4.82901 | GCAATTGCATTTGTT GGATCGCTAA ACA TTATTGATCC TTTTTATAACACGAG cls 65755 - 67251 + | cardiolipin synthetase clpC 67303 - 69825 + | ATP-dependent Clp protease ATP-binding subunit TWT066 70227 - 70003 - | hypothetical protein TWT067 70228 - 70524 + | hypothetical protein TERM 46 70938 - 70952 + G 82 -2.8 -5.46629 | opp_overlap 70926 CAAGAGAAATTTTTT TCTCAC TGG GTCAGA TTTTTTTGCCATATT menD 70560 - 72143 + | 2-oxoglutarate decarboxylase TWT069 72153 - 72698 + | hypothetical protein menA 72719 - 73630 + | 1,4-dihydroxy-2-naphthoate octaprenyltransferase TERM 47 73820 - 73836 + G 76 -4.3 -4.91459 | TCATATTGCGGTCGG CTCTGGC TTT GTCGGGG TTTTTCTCCCTCTTG TERM 48 75003 - 74989 - g 71 -7.1 -4.08216 | opp_overlap 74989, overlap 74992 TGAGTTGGTGCAAAA CCAGC TCCGG GCTGG TCTGGCCAGAATGGA TERM 49 75322 - 75291 - g 72 -8.8 -3.64703 | gap 1, opp_overlap 75289 75291 TGTGTCCGATCGAAA CCCCAGAAGGTCCAA ATA TTGG-CCTTATAGGG TCTTTAGCGTGCTAT TERM 50 76989 - 76974 - g 77 -10.4 -3.41602 | overlap 76982 CGTATTCGATGATAA CCCAGC AACC GCTGGG CGGCAAGGCACAATT rpoB 73769 - 77335 + | DNA-directed RNA polymerase subunit beta TERM 51 81147 - 81162 + G 70 -4.7 -4.44392 | CCTTTTGGAAGGTGA CTCTG TTGATC CAGAG TTTGATTTTTCTTCT rpoC 77362 - 81222 + | DNA-directed RNA polymerase subunit beta' TWT073 82822 - 81461 - | lysophospholipase/serine esterase fusion protein TERM 52 81629 - 81640 + g 88 -5.8 -5.47218 | AGAGTCACCGCGTAT CCAG AGGA CTGG TTTTTTTGCGTAAGA TERM 53 82857 - 82876 + H 77 -7 -4.4267 | overlap 82859 TTGCATGCTGTTATC CCCCTCGC GTAT GCGGGGTG TTTTGCGTTTTAGCA TERM 54 82859 - 82874 + H 72 -8.2 -3.81307 | overlap 82857 GCATGCTGTTATCCC CCTCGC GTAT GCGGGG TGTTTTGCGTTTTAG groES 82917 - 83279 + | co-chaperonin GroES TERM 55 84402 - 84386 - gf 79 -9.3 -4.16943 | opp_overlap 84396 GGCGATATCGCAAAA GCCCTGG TTG CCGGGGC CAAGTCCGTTATGTT TERM 56 84621 - 84632 + GF 70 -2.2 -5.055 | TGCCACATACCGGTT CTGT CAGC ACGG TTTTTTACCAATTAC guaB1 83330 - 84805 + | inosine-5'-monophosphate dehydrogenase TERM 57 85418 - 85434 + GF 83 -9.3 -4.34771 | opp_overlap 85414, overlap 85420 85426 CTTGCACATGATGCG CACCGGC GCG GCCGGGG TTTTGGTCGGTTTTG TERM 58 85420 - 85432 + GF 70 -10.5 -2.50782 | opp_overlap 85414, overlap 85418 85426 TGCACATGATGCGCA CCGGC GCG GCCGG GGTTTTGGTCGGTTT guaB2 84777 - 85931 + | inositol-5-monophosphate dehydrogenase TWT077 85897 - 86637 + | hypothetical protein TERM 59 86623 - 86675 + F 72 -5.5 -4.54553 | GAGATTGAGAGTTGC GCAAAAAGAGACTGAGGCCTATTGG CTT TCGTTGGGCTCTAGCCTCTTTTGGC TTTGTTATGTTTATA TWT078 86703 - 87140 + | hypothetical protein guaA 87137 - 88648 + | bifunctional GMP synthase/glutamine amidotransferase protein pcrA 88753 - 90984 + | ATP-dependent DNA helicase TWT081 91006 - 91254 + | hypothetical protein TWT082 91251 - 92735 + | hypothetical protein purN 92728 - 93375 + | phosphoribosylglycinamide formyltransferase purH 93415 - 95043 + | IMP cyclohydrolase TWT085 95472 - 95131 - | hypothetical protein TERM 60 95433 - 95451 + g 86 -4.5 -5.5604 | AACTCAGATCTCGTG CTAGCAG AAATA CTGCAAG TTTTTTATTCATTGA TERM 61 96115 - 96137 + Gr 72 -2.6 -5.05153 | overlap 96112 96111 96116 CGATTTGTATTTTGA GTGCCTCAGT TTT ACTTGGGCAG TTTATTTTTTCAAGT truB 97666 - 96533 - | tRNA pseudouridine synthase B TWT086 95499 - 96632 + | putative drug efflux protein TERM 62 98157 - 98175 + G 72 -10.2 -2.78073 | opp_overlap 98156, overlap 98156 98163 GGTTATTGCGAACAC TCCGGCTG CTT CTGCCGGA ATTCTTCCGGGTGAT TERM 63 98678 - 98695 + G 83 -10.5 -3.73068 | CTGCTGTTTTTGAGG GCGCGCG TTCA CGCGTGC TTCTTGCGTTCAGAA TERM 64 98731 - 98715 - g 75 -3 -5.24129 | TGCGTTCAGAAAAAA TGACTA CGCTC CAGTCA ATATCTCATATTTGT TWT088 97711 - 98838 + | membrane-associated Zn-dependent protease-like protein dxr 99946 - 98840 - | 1-deoxy-D-xylulose 5-phosphate reductoisomerase TERM 65 98990 - 99006 + g 76 -8.1 -4.08216 | TTCTGTTACATGGAT TATCCTT GCA AAGGATA TTTTGCCAGCCATAA TERM 66 100367 - 100382 + G 72 -6 -4.46675 | opp_overlap 100366 100367, overlap 100369 TGGCTTGTTCTAAAT CTCGGC GATA GCCGTG TTTATTGTATTGAAT TWT090 99986 - 100750 + | protein phosphatase TWT091 102410 - 100773 - | hypothetical protein TERM 67 101046 - 101064 + g 85 -6.1 -5.09426 | opp_overlap 101046 101045 CTTCGAAACATATAT TGAGTTT TGAGT AAACTCA TTTTTTGGAATTCCC TERM 68 102042 - 102054 + g 73 -7.7 -4.16301 | CTCATCAAGAAACGC GCTCA GTG TGAGC TTTATCTCTGATATC TERM 69 102288 - 102269 - G 75 -10 -3.54029 | opp_overlap 102268, overlap 102270 TGGCACCAACCAGAA CGAGGTGC CGTC GCACCTCA AGTGTTATGTCAGAT TERM 70 102287 - 102270 - G 73 -11.3 -2.72096 | opp_overlap 102268, overlap 102269 GGCACCAACCAGAAC GAGGTGC CGTC GCACCTC AAGTGTTATGTCAGA TWT092 102623 - 102874 + | hypothetical protein TERM 71 103195 - 103184 - g 74 -3.6 -4.94811 | TGAAAAATAAAGAAA GGAC TATG GCCC TGACAATCTGCGAAA TERM 72 103789 - 103799 + G 70 -2.4 -4.99312 | opp_overlap 103789, overlap 103784 TCTATCCTGTCAATA CCTC TGG GTGG TTTTGTTCTTATCTT TWT093 102859 - 104292 + | hypothetical protein TWT094 104289 - 105008 + | ABC transporter ATP-binding protein TWT095 105005 - 105361 + | hypothetical protein TERM 73 105392 - 105450 + F 75 -9.5 -3.60348 | opp_overlap 105396 105398 105401, overlap 105399 105401 105431 CTGTTAGGCCTTGTG GAAACATGACCAGGGGCCAGGCAATTC TTGTT GCATTGTCAGGTCCCGGGATCTGTTTC TTATGTGGTGTTGGC TERM 74 105431 - 105446 + G 72 -5.4 -4.41716 | opp_overlap 105401, overlap 105401 105399 105392 TTCTTGTTGCATTGT CAGGTC CCGG GATCTG TTTCTTATGTGGTGT TWT096 105397 - 105576 + | hypothetical protein xerD 109201 - 108152 - | integrase/recombinase TERM 75 109143 - 109130 - G 75 -3.1 -5.22039 | TGCAAAGGGAAAAAA CCAAT CAAA ATCGG GTTTTATATCCGGGG TERM 76 110820 - 110798 - R 78 -4.8 -5.01497 | opp_overlap 110802 ACGACCAGATAAAAA CAGCCACATC CCT GATCTGTCTG ATCCCGCGGATAAAA TWT098 111588 - 110980 - | hypothetical protein TWT099 111957 - 111787 - | hypothetical protein TERM 77 111984 - 112004 + r 70 -4.7 -4.50627 | overlap 111986 111987 ATTGAAGCACCGTCT TGCCGGAAT TGA ATTCCGCTA TTTCTTTCCTAGCTA pyrG 113604 - 111967 - | CTP synthetase TWT101 114670 - 114401 - | hypothetical protein TERM 78 115095 - 115113 + r 70 -8.9 -3.44848 | opp_overlap 115093 115085, overlap 115093 GAGAAGGTCAACACT GATCAGG TAAAC CCTGATC TGTTTGATCCCCGGG recN 117486 - 115849 - | recombination and DNA repair protein TERM 79 116525 - 116536 + g 85 -7.2 -5.02074 | TCGATTGTGCTGCTC CGCG CTAA CGCG TTTTTTGCAAAGTCA TWT103 118410 - 117505 - | inorganic polyphosphate/ATP-NAD kinase TWT104 125376 - 118438 - | hypothetical protein TERM 80 120809 - 120848 + g 75 -10.9 -3.07994 | gap 1, opp_overlap 120805 120843 AACGAGACAGATGCA CCCTGCTTTGTCACAACA AGCTG TGTTGGGG-AAAGCAGGG TTGCCTGCCCTTCAA TERM 81 123157 - 123168 + g 73 -4.4 -4.73613 | TGCACGAGCCTTATC CTTG AGAG CAAG TTTTGTTACTACTAC rplI 125869 - 125408 - | 50S ribosomal protein L9 rpsR 126117 - 125866 - | 30S ribosomal protein S18 ssb 126692 - 126132 - | single-strand DNA-binding protein rpsF 126983 - 126696 - | 30S ribosomal protein S6 TERM 82 127038 - 127021 - R 72 -9.1 -3.62255 | opp_overlap 127027, overlap 127014 127017 CCGAAGAAGAAGCAA CTCCGCG ACCG CACGGAG TGAGGCCATTTTAGC hemH 128278 - 127361 - | phosphoribosylaminoimidazole-succinocarboxamide synthase TERM 83 129040 - 129055 + GH 78 -5.4 -4.82901 | gap 1 ATGGCCCATCCCCGC GCGACGG TAT CCGT-GC TTTTTGTGCAGGGGG menB 128760 - 129677 + | naphthoate synthase menE 129529 - 130815 + | O-succinylbenzoic acid-CoA ligase TERM 84 131195 - 131212 + F 70 -9.1 -3.33492 | opp_overlap 131194 CCGTGGGTTCAAATC CCACCGC TACC GTGGTGG TTATCAAATAACTGA TWT112 131315 - 131995 + | iron-dependent repressor ideR TERM 85 132239 - 132257 + G 76 -8.8 -3.74251 | CGTGTCGCACTCCCA CCGCCG CACTAAA CGGCGG TTTGATCCGAATGTG TERM 86 132269 - 132284 + G 86 -9 -4.52589 | GCGGTTTGATCCGAA TGTGCG TCGA CGCACA TTTTATGTGGCAACC rpmB 132174 - 132410 + | 50S ribosomal protein L28 rpmG 132410 - 132580 + | 50S ribosomal protein L33 rpsN 132581 - 132886 + | 30S ribosomal protein S14 hup 132952 - 133233 + | DNA-binding protein HU TERM 87 133602 - 133638 + G 70 -2.1 -4.94962 | AGAAAGCTGAGTTTT CTGGGCTCAATTTTGAA ACT TACTTAACTGGGCCCGG TTTTGTTTGGATTAT TWT117 133283 - 135376 + | hypothetical protein TERM 88 136542 - 136563 + G 80 -5.8 -5.03994 | TGGCTTGCCGGACCT CGGGGC AGGGATCTAA GCCCCG TTTTTGTCTCTGAGC TWT118 135378 - 137474 + | DNA helicase TERM 89 137511 - 137523 + G 78 -6.2 -4.6709 | TCGGTTACAGGCCGC GCGG TCTGT CCGC TTTTGTGTGCTTTTG TWT119 137478 - 137633 + | hypothetical protein tuf 137614 - 138807 + | elongation factor Tu TWT121 140979 - 139096 - | hypothetical protein TERM 90 139302 - 139292 - G 73 -4.6 -4.77165 | overlap 139294 GCTGGCATAACAAAA CACG CTT CGCG CACACGGTTACCGCT TERM 91 140561 - 140543 - G 70 -2.5 -5.02074 | gap 1, opp_overlap 140543 140555 TCATTTGTGAAAAAA TCGGTATC CCCG GATA-CGA ATCTCTTATCTATAT TERM 92 142492 - 142509 + G 82 -6.9 -4.83169 | overlap 142495 CGTTTGTAATCGACC CGTCGCC ATCT GGCGGTG TTTTTCTCACAGGGT manA 141066 - 142580 + | mannose-6-phosphate isomerase whiB 142593 - 142940 + | putative sporulation regulatory protein TERM 93 144109 - 144093 - g 93 -12.3 -3.65991 | ATCCGTTTAACATAA TCCCAGC ATT GCTGGGA AGCCTAACCTTTTGG TERM 94 144686 - 144709 + G 73 -4.6 -4.77438 | ATTCTTATGGGCCTG TGGAAGACTT ACTC AAGTTTGCCA TTTTTGCTGATAACT TERM 95 144872 - 144886 + G 88 -3.4 -5.76237 | overlap 144867 144873 GCCCTTGTATCTGTG GGCGCC CTC GGTGCA TTTTTTGTTTATATA TERM 96 144873 - 144885 + G 71 -6.9 -4.03302 | overlap 144867 144872 CCCTTGTATCTGTGG GCGCC CTC GGTGC ATTTTTTGTTTATAT TERM 97 145366 - 145379 + G 73 -4.5 -4.80077 | TTTTCCGCCCTATTA TTGGC TTTC GCCGA TTGTTTTTCTTTTAC TWT124 142937 - 145498 + | regulatory protein TERM 98 145957 - 145974 + G 80 -7.1 -4.5774 | opp_overlap 145956 TGGGCGGGGCAACAG GTGTATT TGAT AATACAC TTTTGATTCTTGGTA TERM 99 146414 - 146374 - g 72 -4.7 -4.56597 | opp_overlap 146381, overlap 146375 GTGTTGTTTCAAAAA CCGCTCCGGGCACA-GCTC TTACT GCACATGTGGCCGGAG-GG TCAATACGAGATATA TWT125 145551 - 146930 + | hypothetical protein TWT126 147087 - 147419 + | hypothetical protein TERM 100 147480 - 147508 + GF 71 -9.6 -3.24925 | opp_overlap 147480 147485, overlap 147482 147485 GCAGCTTACAACTGA CATAAGCCGCGC AATTG GTGCGGCTTATA TTGATAGTCTCGGAT TERM 101 147482 - 147506 + GF 81 -12.2 -3.18849 | opp_overlap 147480 147485, overlap 147480 147485 AGCTTACAACTGACA TAAGCCGCGC AATTG GTGCGGCTTA TATTGATAGTCTCGG TERM 102 147485 - 147503 + GF 79 -9.5 -3.73144 | opp_overlap 147480 147485, overlap 147482 147480 TTACAACTGACATAA GCCGCGC AATTG GTGCGGC TTATATTGATAGTCT TERM 103 147593 - 147614 + GF 74 -10.9 -2.79183 | opp_overlap 147595, overlap 147595 ACGCATTTGCCGAAG GATGCACTG CGCG CGGTGCATC TGTGATAGACATAGG manB 147367 - 148797 + | phosphomannomutase/phosphoglucomutase TWT128 148864 - 149139 + | hypothetical protein TERM 104 149502 - 149514 + GF 71 -3.3 -4.89567 | AAAACTATTGGCGTG GAACC TGT GGATC TTTTGTGTTTTAGAA TERM 105 149717 - 149707 - gf 80 -6.8 -4.62069 | CGCTTACCGGAAAAA CCCT AAT AGGG GCGGTTGTTCTATTC comFC 149079 - 149843 + | comF operon protein 3 secA 150087 - 152630 + | preprotein translocase subunit SecA TERM 106 153032 - 153046 + G 84 -8.6 -4.66163 | GAATGCATTTATCTC TTCTGC GAA GCAGAA TTTTTGCATAAAACT TWT131 152949 - 153389 + | hypothetical protein TWT132 153534 - 154298 + | hypothetical protein TWT133 154307 - 155089 + | sporulation initiation inhibitor SOJ-like protein TWT134 155684 - 155253 - | hypothetical protein gcvB 155897 - 158803 + | glycine dehydrogenase TERM 107 159060 - 159080 + G 79 -8.3 -4.30576 | overlap 159047 159044 159056 TACGGCAGTCTCAGC CGTGCTGTT TGT GACAGCATG TTTTGGTGGTAAGCC dppA1 159013 - 160593 + | dipeptide ABC transporter substrate-binding protein TERM 108 161180 - 161168 - g 71 -3.4 -4.82667 | TCAGGATATTAAAAA GTTC GGACA GAAC CCAATAGGCAATGGG dppA2 160590 - 162191 + | dipeptide ABC transporter substrate-binding protein TWT138 162797 - 162192 - | ABC transporter permease protein TERM 109 162309 - 162273 - G 86 -13.8 -3.2048 | opp_overlap 162269, overlap 162264 TGTAAATGGCAGGAA GATTGCGAGGGGCTTT TTTTG AATCCCCCTCGCAATC TGGGCTTCCCTAACC TERM 110 162374 - 162388 + g 81 -3.5 -5.37593 | GGACTGTCATTGACA GGGTT AAGCC GACCC TTTTTTGGTTTAACC TWT139 163637 - 162924 - | ABC transporter ATP-binding protein TERM 111 163697 - 163713 + H 83 -4.3 -5.34857 | TTTAGAGCCTCATAG CTGTGTG GCC CGCGCGG TTTTGTTTTGTTTCG dppB 163699 - 164697 + | dipeptide transport system permease protein dppC 164699 - 165664 + | dipeptide transport system permease protein dppD 165661 - 167289 + | dipeptide transport system ATP-binding protein TERM 112 167932 - 167909 - T 79 -10.4 -3.60627 | gap 1, opp_overlap 167913, overlap 167912 GCACTCCAGTCCAAA CAAG-CCAAGG TTT CCTTGGTCTTG CAGGCGCCCTACTAC TERM 113 167913 - 167927 + T 70 -10 -3.01791 | opp_overlap 167912 167909 TCCAGTCCAAACAAG CCAAGG TTT CCTTGG TCTTGCAGGCGCCCT TERM 114 168937 - 168923 - T 70 -10 -2.96031 | opp_overlap 168923 168921, overlap 168922 168919 CCCAGTCCAAACAAC CCAAGG TTT CCTTGG TGCTGTTGCAAACGC TERM 115 169705 - 169691 - T 70 -10 -2.96031 | opp_overlap 169691 169689, overlap 169690 169687 CCCAGTCCAAACAAC CCAAGG TTT CCTTGG TGCTGTTGCCGGCGC TERM 116 170806 - 170783 - T 77 -10.4 -3.36492 | gap 1, opp_overlap 170786 170787, overlap 170786 TCCTCAAGTCCACAA CAAG-CCAAGG TCT CCTTGGTCTTG TTGGCGCCGTCCTAC TERM 117 170787 - 170801 + T 73 -10 -3.38991 | opp_overlap 170786 170783, overlap 170786 CAAGTCCACAACAAG CCAAGG TCT CCTTGG TCTTGTTGGCGCCGT TERM 118 172158 - 172144 - T 70 -10 -2.94076 | opp_overlap 172144, overlap 172143 CCACCACACAACAAG CCAAGG TTT CCTTGG TGCTGTTGCCGGCGC TWT143 173227 - 172457 - | hypothetical protein TERM 119 174685 - 174656 - H 87 -14.5 -2.79796 | gap 1, opp_overlap 174662 174663, overlap 174659 174662 CCCCAGTCCACCACA CAACAAG-CCAAGG TCT CCTTGGTCTTGTTG CAGGCGCCGTCCTAC TERM 120 174682 - 174659 - H 79 -10.4 -3.54951 | gap 1, opp_overlap 174662 174663, overlap 174656 174662 CAGTCCACCACACAA CAAG-CCAAGG TCT CCTTGGTCTTG TTGCAGGCGCCGTCC TERM 121 174663 - 174677 + H 73 -10 -3.38812 | opp_overlap 174662 174659 174656, overlap 174662 CCACCACACAACAAG CCAAGG TCT CCTTGG TCTTGTTGCAGGCGC TERM 122 174910 - 174924 + H 73 -10 -3.38812 | opp_overlap 174910 174909, overlap 174908 CAAGTCCACAACAAC CCAAGG TTT CCTTGG TCTTGTTGCAGGCGC TERM 123 175614 - 175577 - H 71 -9.9 -3.14602 | overlap 175575 CCGACTGCAGTAACA GGGTTACCTGTAACCCA TACC TGCGTTACCGGTAAACC GTAACCACAAACATA TERM 124 177089 - 177071 - H 79 -9.6 -3.66378 | opp_overlap 177070 CACACCTGACCCAAA TGGCACAA ACA CTGTGCCA AGTATTAATGCTGTG TERM 125 178915 - 178934 + G 77 -10.8 -3.4252 | TTACGAGCCTCATCT TGACACAG GTGA CTGTGTCA TTGTAGTGAATGCCG TERM 126 179062 - 179030 - g 88 -7.9 -5.08824 | gap 1 GGTGGACTGAAAAAA CGTGGCTTTTCTGA TGTATT TCAAAAAAGCC-CG GAGAGGGTTCTGGAA rplM 178796 - 179224 + | 50S ribosomal protein L13 TERM 127 179661 - 179641 - g 100 -8.2 -5.10077 | overlap 179656 AAAGAGCGCAAAAAA GCCGGCCT GAAAA AGGCCCGC AAGGCACCTCAGTAT rpsI 179224 - 179688 + | 30S ribosomal protein S9 TERM 128 180266 - 180286 + G 82 -11.9 -3.44487 | overlap 180259 180264 GTGCCAATGGCGCAG CGTCTGGTG TTT CACCAGATG TATTTAAGTCTGCTG TERM 129 180432 - 180457 + G 70 -8.9 -3.33696 | CGGCCTTGCTTTTGA CGGCGATGCTG ATCG CTGCATCGCGG TTGATTCAAACGGCA mrsA 179692 - 181053 + | phosphohexose mutase coaA 181783 - 181028 - | pantothenate kinase TERM 130 181118 - 181145 + g 75 -2.8 -5.22039 | gap 1, overlap 181119 181138 AAAGTCTGCCGTATG TTTCACTGGCAAA ATA TTTTCC-GTGAAG TTTTTTCGGTTTACG TERM 131 181211 - 181232 + g 70 -2.3 -4.98436 | TCTTCTGGGGAGATT CGCATACTT TCGA AAATATGTG TTTTTCTCATGTTGC TERM 132 181940 - 181923 - H 79 -8.5 -4.35091 | opp_overlap 181925 AATACGTATAACAAA CATACAC AACC GTGTATG TAGTAAACACATGTG TWT148 183481 - 184386 + | hypothetical protein TERM 133 185079 - 185062 - f 72 -2.6 -4.99035 | opp_overlap 185063, overlap 185063 185064 185066 CGACCGAGACAAAAA CCCACC TACCAT GGTGGT TAGTGATGATCACTG TERM 134 185988 - 185974 - f 70 -10 -3.06361 | overlap 185976 CAGGAAGTATAGATA CAGGTG TTA CACCTG GAAAATATGTTGCAA TERM 135 186120 - 186152 + F 72 -10.7 -2.78422 | opp_overlap 186129, overlap 186118 CCGGCGACACCAGCC CACATGTAACACAGT ATT ACTGTGTCATGTGTG TGGTTACCTATATAT TERM 136 187087 - 187065 - gf 80 -6.2 -4.79223 | GTAGATGAGCAAAAA GCGAGGAGCA AGG TTCTCCTGGC ACAGTTGGCTGTGTT TERM 137 187197 - 187167 - gf 79 -11.1 -3.36073 | gap 1, overlap 187165 GAGAGGCGGGAAAGA GCTGAAGCCGCACG CCGG CGTGCGGCC-CTGC GTGACAAGGGTAATC TWT149 186399 - 187631 + | NPL/P60 family secreted protein TWT150 187546 - 188061 + | hypothetical protein TERM 138 188818 - 188790 - gT 74 -7.3 -4.33105 | overlap 188791 188792 CAACCACCAGCAAAA CCCGCCGCAGCAA AAC CCGCCGCAGCGAA ACCCGCACCTGCGAA TWT151 187977 - 189359 + | hypothetical protein tgt 190577 - 189363 - | queuine tRNA-ribosyltransferase TWT153 190653 - 191180 + | hypothetical protein ppa 191168 - 191662 + | inorganic pyrophosphatase TERM 139 191774 - 191789 + F 72 -6 -4.4078 | overlap 191773 191788 AGCTCTAGGACATCT GCCCCC TCTA GGGCGC TTTTGGTTGCAAAGC TWT155 191946 - 192581 + | hypothetical protein TERM 140 192988 - 192950 - f 78 -11.9 -3.09655 | gap 1, opp_overlap 192942 192955 192983, overlap 192955 GTATAGACAGACAGA GCCAACTGCAGTTACAGA GTTA CCTGTAACTGCGGTTG-C GTAACCTGTTACTCA TERM 141 192984 - 192955 - f 77 -11.5 -3.18511 | opp_overlap 192955 192942 192983, overlap 192950 GACAGACAGAGCCAA CTGCAGTTACAGA GTTA CCTGTAACTGCGG TTGCGTAACCTGTTA TERM 142 192955 - 192984 + F 82 -13 -3.0792 | opp_overlap 192950 192955, overlap 192942 192983 GACAGACAGAGCCAA CTGCAGTTACAG AGTTAC CTGTAACTGCGG TTGCGTAACCTGTTA TERM 143 194024 - 194002 - g 93 -12 -3.78934 | opp_overlap 194016 CTGTTTTTACAAGAA GTGCCAGAGA TCG CCTCCGGCAC TGTGGAGATTGTTGC nusA 193438 - 194397 + | transcription elongation factor NusA TERM 144 195026 - 195038 + G 72 -9.1 -3.5393 | CCTGCGCGGGCGTGG TGCCC CCG GGGCA TTTGGCCGAGGTAAT infB 194529 - 196940 + | translation initiation factor IF-2 TWT158 196918 - 197220 + | hypothetical protein rbfA 197284 - 197874 + | ribosome-binding factor A TERM 145 200092 - 200121 + GF 83 -13.7 -2.52543 | opp_overlap 200099, overlap 200099 TCTCGGCTTAGTTGT TGAGCAAGGGAAC GTGC GTTCCCTTGCTGA TGCCTTGGAAAAGAT TWT160 197792 - 200422 + | glycosyltransferase domain-containing protein TWT161 200409 - 200780 + | hypothetical protein TERM 146 203086 - 203074 - g 79 -9.1 -4.12198 | GAGAAGTCTGTAAAA CCGGT TTT ACCGG GACCATTAACCCTTT metE 201469 - 203937 + | 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase TWT163 204598 - 204434 - | hypothetical protein infC 204803 - 205351 + | translation initiation factor IF-3 rpmI 205425 - 205619 + | 50S ribosomal protein L35 rplT 205649 - 206059 + | 50S ribosomal protein L20 TERM 147 206606 - 206591 - g 73 -4 -4.91109 | overlap 206593 GTGCGAGTATAAAAA TCCTCT CGCA AGAGAA AAAGCCCATTATCGG pheS 206443 - 207453 + | phenylalanyl-tRNA synthetase subunit alpha TERM 148 207919 - 207883 - g 86 -11.1 -3.72363 | GACCCAAACGGGAAA TTTCTCTAATGCAGA TACGAAT TCTGCATTAGAGACA CGGGATATCGTCTGT pheT 207536 - 210424 + | phenylalanyl-tRNA synthetase beta chain tyrS 210623 - 212038 + | tyrosyl-tRNA synthetase TERM 149 212353 - 212328 - f 75 -11.3 -3.04022 | opp_overlap 212350, overlap 212330 212332 AGGAAATATTACAGA GATAGTACTGC ACGT ACAGTACTATC AGCCACAGATATCTT TERM 150 212755 - 212770 + F 88 -8.2 -4.74787 | opp_overlap 212746 212743 CAAGTACGCTTCTTA GCGCCC TCCT GGGTGC TTTCTTTCTGTTTGT TERM 151 213567 - 213550 - f 74 -11.3 -2.85621 | opp_overlap 213550 213552, overlap 213549 213552 AAGTCGAACGGAAAT CAGGGAG CTTG CTCCCTG TGATTAGTGGCGAAC TERM 152 213550 - 213567 + F 74 -11.3 -2.77899 | opp_overlap 213549 213550 213552, overlap 213552 AAGTCGAACGGAAAT CAGGGAG CTTG CTCCCTG TGATTAGTGGCGAAC TERM 153 213982 - 213954 - f 73 -4.4 -4.84359 | GTACCTGCAGAAAAA GCGCCGGCTAAC TACGT GCCAGCAGCCGC GGTAATACGTAGGGC TERM 154 214083 - 214065 - f 89 -11 -4.07568 | CGTCTGCCGTGAAAA TCCGAGGC TCA ACCTCGGA CCTGCGGTGGGTACG TERM 155 214479 - 214464 - f 76 -9 -3.66139 | overlap 214476 GATATATACCGGAAA GGCGTA GAGA TACGCC CCCCGCAAGGTCGGT TERM 156 215193 - 215217 + G 76 -8.5 -4.09685 | GAGAGGCCAGGCTTT TACGGGTGGGC AGT GTCCGGCCGTA TTTTGAGAACTGCAC TWT170 215047 - 215223 + | hypothetical protein TERM 157 215270 - 215285 + F 79 -10.4 -3.6217 | overlap 215269 GACTTAGTCTAGAGT CTGCGC TTAT GCGCAG TATTTGTGATTCAAG TERM 158 216711 - 216693 - f 93 -11.7 -3.69323 | GCATGAGTAGCGAAA GGCGGGT GAAAA ACCCGCC CCCCCGAATAACTAA TWT171 218655 - 218882 + | hypothetical protein TERM 159 219372 - 219382 + T 73 -2.4 -5.18866 | TTTTTATTTCTTTTA GTGC TTC GCTC TTTTGTTTCTTTCGG TWT172 220108 - 219794 - | hypothetical protein TWT173 220500 - 221714 + | hypothetical protein TWT174 221724 - 222617 + | hypothetical protein TERM 160 223083 - 223095 + G 76 -7.7 -4.2828 | opp_overlap 223082 223083, overlap 223094 AGGGCTCTTGTAAAT CAACC GCA GGTTG TTTTGCTCGATGAGC TWT175 222618 - 223280 + | ABC transporter ATP-binding protein TERM 161 223300 - 223312 + F 76 -7.7 -4.23758 | TGCCGTTCCGCGCCG CGTGT TGC ACACG TTTTGGGTGTACACT TWT176 223413 - 223991 + | hypothetical protein TERM 162 224067 - 224109 + G 75 -9.8 -3.61902 | opp_overlap 224070, overlap 224070 GGCTCTAAATACTTG AAAGTGCCCTTCGGCGTG ATGTATA CACGCGGAGGGGCACTCC TTATGTATCCTGCGC TERM 163 224070 - 224106 + G 93 -15.9 -2.92712 | opp_overlap 224070, overlap 224067 TCTAAATACTTGAAA GTGCCCTTCGGCGTG ATGTATA CACGCGGAGGGGCAC TCCTTATGTATCCTG TERM 164 224106 - 224070 - g 100 -13.7 -3.695 | opp_overlap 224070 224067 TCTAAATACTTGAAA GTGCCCTTCGGCGTG ATGTATA CACGCGGAGGGGCAC TCCTTATGTATCCTG TERM 165 225014 - 225002 - g 70 -9.1 -3.31144 | opp_overlap 225001 CCCGGACTCTGATAA CCTGC TCC GCAGG CTATATACATCGGAT TWT177 224064 - 225104 + | ABC transporter ATP-binding protein TERM 166 225215 - 225225 + G 83 -2.4 -5.69976 | CTGGGTCTCGGGATG CCCG TTG CGAG TTTTATTTTTTTTGT TERM 167 225583 - 225598 + G 70 -4.7 -4.37886 | TATGCTTCTTGGCAC GGCAA TCGGGT TTGCC TTTTCTGCCGCATCA TWT178 225107 - 225886 + | hypothetical protein TWT179 225917 - 226093 + | hypothetical protein TERM 168 226608 - 226618 + G 76 -8.2 -4.17089 | CTTCTTCTTGTCTAT GGGC TTG GCCC TTTTCCCCGTTTAGG TWT180 226080 - 227546 + | hypothetical protein TWT181 227567 - 228115 + | hypothetical protein TERM 169 230110 - 230081 - g 75 -11.4 -3.03443 | CTAGCATTACACAGA GCTGCACGCATG ACCGCA CAGGCGCGCAGC AAAAATCGTATATAT TERM 170 230690 - 230706 + G 71 -3.7 -4.82901 | opp_overlap 230690 230692, overlap 230692 ATACCCCATTTCAAA CACATTT TGA AAATGAG TTTTTATACACAGAA trcF 228490 - 232365 + | transcription-repair coupling factor proS 234484 - 232643 - | prolyl-tRNA synthetase TWT184 234805 - 235101 + | hypothetical protein TWT185 235098 - 235493 + | hypothetical protein ispG 236716 - 235574 - | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase TERM 171 236063 - 236051 - G 79 -10.5 -3.53224 | opp_overlap 236051 TATTGTTCCCTGAAA GGCGG GCC CCGCC TCTGTAACGCCGAGA TERM 172 236051 - 236063 + g 72 -10.5 -2.87132 | opp_overlap 236051 TATTGTTCCCTGAAA GGCGG GCC CCGCC TCTGTAACGCCGAGA prsA 237908 - 236862 - | ribose-phosphate pyrophosphokinase TERM 173 237425 - 237411 - G 74 -5.6 -4.65895 | TGGTCCATTGAAAAA TCCCTG TAT CTGGGA AGCATGCAAGTCAAC TWT188 239722 - 237905 - | putative UDP-N-acetylglucosamine pyrophosphorylase TERM 174 238906 - 238933 + g 79 -12.8 -2.90714 | opp_overlap 238895 238913, overlap 238895 238909 CACAGTCCTGATTAG TCACACAGTCCT GATT AGGACTGTGTGC TATATGGCACTTTAA TERM 175 238909 - 238930 + g 81 -13.1 -2.69647 | opp_overlap 238895 238913, overlap 238906 238895 AGTCCTGATTAGTCA CACAGTCCT GATT AGGACTGTG TGCTATATGGCACTT TERM 176 239604 - 239581 - G 83 -9.6 -4.09685 | gap 1, opp_overlap 239581, overlap 239583 GTGCACCCCTCAAAA CATGGGCTACC ATG GGCAGCCCA-G CGATATTGTGCAAGA TERM 177 239603 - 239583 - G 90 -13.3 -3.64716 | opp_overlap 239581, overlap 239581 GCACCCCTCAAAACA TGGGCTACC ATG GGCAGCCCA GCGATATTGTGCAAG TERM 178 240484 - 240447 - H 73 -10.7 -3.06261 | opp_overlap 240424 240429 240460, overlap 240449 CTGTAACCCGTAACA GAGTTACTGGTAACACA TACT TGTGTTACATGTAACCC ACTGGTGCACAACAT TERM 179 240482 - 240449 - H 70 -9.7 -3.08867 | opp_overlap 240424 240429 240460, overlap 240447 GTAACCCGTAACAGA GTTACTGGTAACACA TACT TGTGTTACATGTAAC CCACTGGTGCACAAC TERM 180 241169 - 241133 - H 77 -10.9 -3.1552 | overlap 241139 TGGCATGTAGTAACA GAGTAACCTGTAACGCA TGG CGAGTTACAGGTAACCC AACCCACACAACCTG TERM 181 241163 - 241139 - H 70 -9.3 -3.38951 | overlap 241133 GTAGTAACAGAGTAA CCTGTAACGCA TGG CGAGTTACAGG TAACCCAACCCACAC TWT189 246207 - 247541 + | putative type II/type IV pathway secretion protein TERM 182 248019 - 247992 - gf 79 -10 -3.66178 | overlap 248013 CGGTGCAACGGGAAA TTTTGCATCTGC TGTT GCAAACGCAAAA TGCGCACTTGCAGAT TWT190 247495 - 248379 + | hypothetical protein TERM 183 248506 - 248518 + G 74 -3.4 -4.98531 | overlap 248503 ATTTATCAGGGTTAT CACA GGATA TGTG TTTTTCCTTTAGAAG TWT191 248376 - 249272 + | hypothetical protein TWT192 249335 - 249523 + | hypothetical protein TWT193 249520 - 249939 + | hypothetical protein TWT194 249939 - 250373 + | hypothetical protein TERM 184 250575 - 250562 - gf 71 -3.7 -4.87786 | opp_overlap 250562 CGAAGTGGATAAAAA GCAGC GATG GCAGC ATTATGCCGATGGTT TWT195 250300 - 250986 + | hypothetical protein TERM 185 251895 - 251839 - f 82 -13.1 -3.04263 | opp_overlap 251848 251870, overlap 251841 251843 AGGTTATCTGTAACA CACACCACAGAGTAACTGGTAACAC CCACGCC GTGTTACATGTTGCACTGTGGTGCG CGACTTGTAACCGCT TERM 186 251893 - 251841 - f 78 -12.1 -3.07895 | opp_overlap 251848 251870, overlap 251839 251843 GTTATCTGTAACACA CACCACAGAGTAACTGGTAACAC CCACGCC GTGTTACATGTTGCACTGTGGTG CGCGACTTGTAACCG TERM 187 256863 - 256845 - f 73 -11 -2.71416 | overlap 256844 TACCATGGATACAAG GGGTAGGA ATA CCCTACCC ACGGGTCTCTGGTAA TERM 188 257476 - 257462 - f 70 -10 -3.06361 | overlap 257464 CAGGAAGTATAGATA CAGGTG TTA CACCTG GAGAGTATGTTGCAA TERM 189 259090 - 259034 - f 70 -9.6 -3.06696 | gap 1, opp_overlap 259053 259054, overlap 259032 CGTGCGCGTAACAGA GTTACCCGTAACCCGCACTCGCG CAACCTGTAACC CCCG-GTGCGCGTTACAGGTAAC CGCTTGTGTTGCATA TERM 190 259178 - 259141 - f 72 -10.7 -2.80816 | opp_overlap 259154, overlap 259121 259143 259158 CCTGTAGCCATTACA GAGTTACCGGTAACACA TACT TGTGTTACATGTAACCC GCTGGCGCACAACAT TERM 191 259176 - 259143 - f 70 -9.7 -2.95298 | opp_overlap 259154, overlap 259121 259141 259158 TGTAGCCATTACAGA GTTACCGGTAACACA TACT TGTGTTACATGTAAC CCGCTGGCGCACAAC pyrB 259506 - 260726 + | aspartate carbamoyltransferase qacA 265137 - 263965 - | multidrug efflux protein TERM 192 264773 - 264724 - G 77 -7 -4.39329 | overlap 264720 264728 264733 ACCTGACACAAGAAA CGTACCCAACGCTCCGCCGAGC CTGAAC GCTCCGCCGAGCACTGAGAATG CCCGTGCCCTGACCT TERM 193 264769 - 264728 - G 72 -10.8 -2.79594 | overlap 264720 264724 264733 GACACAAGAAACGTA CCCAACGCTCCGCCGAGC CTGAAC GCTCCGCCGAGCACTGAG AATGCCCGTGCCCTG prfB 265210 - 266340 + | peptide chain release factor 2 TERM 194 268978 - 268949 - g 100 -12.1 -4.60797 | overlap 268951 268952 CTGGGACAGACAAAA CAGTGCCGGGCAG AGCT CTGCCCGGCATCA CAGATCAGAGCGGCG TERM 195 268976 - 268951 - g 100 -14.7 -3.91674 | overlap 268949 268952 GGGACAGACAAAACA GTGCCGGGCAG AGCT CTGCCCGGCAT CACAGATCAGAGCGG TERM 196 268975 - 268952 - g 100 -18.2 -2.94281 | overlap 268951 268949 GGACAGACAAAACAG TGCCGGGCAG AGCT CTGCCCGGCA TCACAGATCAGAGCG ftsE 266512 - 269268 + | cell division ATP-binding protein TERM 197 269658 - 269644 - g 70 -2.1 -5.00467 | overlap 269646 TCAAGAACAACAAAA TCGTC GAGCT GACAA CACCCGACCAGCTTA TERM 198 270109 - 270123 + G 80 -7.2 -4.66833 | TTGGTGATTCTTTGA TAATCG TTC CGATTA TTTTTGGGATTGCCA ftsX 269283 - 270194 + | cell division protein FtsX smpB 270206 - 270841 + | SsrA-binding protein TERM 199 271164 - 271147 - f 79 -8.5 -4.35091 | opp_overlap 271149 AATACGTATAACAAA CATACAC AACC GTGTATG TAGTAAACACATGTG TERM 200 271254 - 271222 - f 85 -13.8 -3.04537 | opp_overlap 271200 271187 271231, overlap 271187 271213 ATTACAGTACATACA TGTATTACATATGT GACTT ACATATGTAATACA ACAAATACATGTACA TERM 201 271277 - 271260 - f 77 -7.1 -4.46675 | opp_overlap 271270, overlap 271213 271272 271274 ATGTAATACAACAAA TACATGT ACAT ACATGTA TCACATGTGTGACTT TERM 202 274143 - 274129 - g 70 -10 -3.06361 | overlap 274131 CAGGAAGTATAGATA CAGGTG TTA CACCTG GAGAGTATGTTGCAA TWT202 272907 - 276632 + | hypothetical protein ksgA 276629 - 277975 + | dimethyladenosine transferase TERM 203 281914 - 281882 - f 71 -6.9 -4.17296 | overlap 281887 TGGCATATACACAAA CCTAACCCATAACAC ATG GAGCTATGGGGGAGG TGGTAAAACAACACA TERM 204 282205 - 282149 - f 77 -10.9 -3.12351 | gap 1, opp_overlap 282200, overlap 282152 CTGCGCGACATGTAA CCACACCACAG-GTTACCTGTAACCC GTAACA GGGTAACTGGTAACTCTGGGGTGCGC AACCTGTTACGCACC TERM 205 282202 - 282152 - f 82 -13.4 -2.77182 | gap 1, opp_overlap 282200, overlap 282149 CGCGACATGTAACCA CACCACAG-GTTACCTGTAACCC GTAACA GGGTAACTGGTAACTCTGGGGTG CGCAACCTGTTACGC TERM 206 282559 - 282545 - f 70 -10 -3.06361 | overlap 282547 CAGGAAGTATAGATA CAGGTG TTA CACCTG GAGAGTATGTTGCAA TERM 207 282902 - 282934 + F 100 -16.5 -3.82865 | opp_overlap 282911, overlap 282891 CCGGCGACACCAGCC CACATGTAACACAGT ATT ACTGTGTCACATGTG TTTCACTGTTGTTTA TERM 208 283034 - 283057 + F 71 -6.8 -4.04397 | gap 1, overlap 283034 283037 283038 CCTGTGTATCATGGC TACTTGCAACC GGG GGTTGC-AGTG TGTTTTTGTCACACT TERM 209 283034 - 283059 + F 78 -5.5 -4.84359 | gap 1, overlap 283034 283037 283038 CCTGTGTATCATGGC TAC-TTGCAACC GGG GGTTGCAGTGTG TTTTTGTCACACTCC TERM 210 283037 - 283055 + F 75 -9.6 -3.61001 | overlap 283034 283034 283038 GTGTATCATGGCTAC TTGCAACC GGG GGTTGCAG TGTGTTTTTGTCACA TERM 211 283038 - 283054 + F 73 -10.9 -2.75877 | overlap 283037 283034 283034 TGTATCATGGCTACT TGCAACC GGG GGTTGCA GTGTGTTTTTGTCAC TERM 212 283761 - 283747 - f 70 -10 -3.06361 | overlap 283749 CAGGAAGTATAGATA CAGGTG TTA CACCTG GAGAGTATGTTGCAA ilvD 285094 - 286803 + | dihydroxy-acid dehydratase ilvB 286848 - 288593 + | acetolactate synthase 1 catalytic subunit ilvH 288484 - 288828 + | acetolactate synthase small subunit ilvC 288897 - 289898 + | ketol-acid reductoisomerase TERM 213 290078 - 290064 - g 72 -4.9 -4.56607 | opp_overlap 290075 GGATGAATTACAAAA GAGGC TTTCT GCCCC AGGGTTCGGGTCTGT ilvE 289999 - 291084 + | branched-chain amino acid aminotransferase TERM 214 291141 - 291154 + G 73 -9.5 -3.37091 | overlap 291136 TGTTTTTGTGCGTGA CCCGC GTGT GCGGG TTAGATTTTGCCCGT gltX 291133 - 292575 + | glutamyl-tRNA synthetase TWT210 292576 - 293697 + | putative thioredoxin reductase TERM 215 294690 - 294678 - gf 75 -6.2 -4.38927 | opp_overlap 294678 CGGCGATATAATAAA GGCG CTGAT CGCC TCCTTTGTCGCTATT bioY 294139 - 294732 + | biotin synthesis BioY protein TWT212 294695 - 297433 + | hypothetical protein glkA 297460 - 298404 + | glucokinase plsC 298483 - 299148 + | 1-acyl-sn-glycerol-3-phosphate acyltransferase TWT215 299081 - 300499 + | phospho-2-dehydro-3-deoxyheptonate aldolase pknB 302582 - 300777 - | serine/threonine-protein kinase TERM 216 300921 - 300937 + g 76 -5.1 -4.88228 | overlap 300923 AGATGTCAAAGCGTC AACTGCA TCA TGCAGTG TTTTTCCTGTTAGGT TERM 217 300923 - 300935 + g 73 -7.7 -4.05583 | overlap 300921 ATGTCAAAGCGTCAA CTGCA TCA TGCAG TGTTTTTCCTGTTAG TERM 218 301781 - 301814 + g 77 -11.9 -2.76696 | gap 1, opp_overlap 301782 301784 301787, overlap 301780 301784 TCTTCAATGCATTCA ACAGAACAGAGGC-AT CCG ATGGCCTCTGTTCTGG ATTCTTGGAGCAGGC TERM 219 301813 - 301782 - G 93 -15.4 -3.09933 | gap 1, opp_overlap 301781 301780 301784, overlap 301784 301787 CTTCAATGCATTCAA CAGAACAGAGGC-AT CCG ATGGCCTCTGTTCTG GATTCTTGGAGCAGG TERM 220 301811 - 301784 - G 80 -12.2 -3.1085 | gap 1, opp_overlap 301781 301780 301784, overlap 301782 301787 TCAATGCATTCAACA GAACAGAGGC-AT CCG ATGGCCTCTGTTC TGGATTCTTGGAGCA TERM 221 301784 - 301811 + g 78 -12.2 -2.6563 | gap 1, opp_overlap 301784 301782 301787, overlap 301781 301780 TCAATGCATTCAACA GAACAGAGGC-AT CCG ATGGCCTCTGTTC TGGATTCTTGGAGCA TERM 222 301808 - 301787 - G 72 -8.1 -3.69256 | gap 1, opp_overlap 301784 301781 301780, overlap 301784 301782 ATGCATTCAACAGAA CAGAGGC-AT CCG ATGGCCTCTG TTCTGGATTCTTGGA idsA 303731 - 302592 - | geranylgeranyl pyrophosphate synthase TWT218 303769 - 304110 + | hypothetical protein TWT219 304838 - 305266 + | cell division protein MraZ TERM 223 305252 - 305309 + F 78 -6.4 -4.55689 | gap 1 GCCGAGGAGGTGATT CCGGGTCTTATTTGATGTCTGTGGC GATTCCCCG GCTACAGA-ACCTTATAAGGCCCGG TTTTATATGAATGGT TERM 224 305586 - 305597 + G 85 -5.8 -5.29846 | TATTTATCTAATCTG CACC CAAA GGTG TTTTTGTTTGACCTT TWT220 305316 - 306269 + | hypothetical protein TWT221 306266 - 306721 + | hypothetical protein TERM 225 308476 - 308461 - g 75 -3.2 -5.26907 | opp_overlap 308466, overlap 308463 308465 308466 308468 TAAGACAAAACAAAA TACAGC AGCC GCTGTT GCGCCTGTTTTTCAA TERM 226 308466 - 308483 + G 80 -6.9 -4.58283 | opp_overlap 308463 308461 308465 308466 308468 CAAAACAAAATACAG CAGCCGC TGTT GCGCCTG TTTTTCAAAAGGTTA pbpB 306824 - 308569 + | penicillin-binding protein 2 murF 308591 - 309985 + | UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine ligase mraY 309982 - 311091 + | phospho-N-acetylmuramoyl-pentapeptide-transferase TERM 227 312137 - 312127 - gf 74 -5.4 -4.56597 | CCGGCGGTCTAAAAA TGGT TTT ACCA GGTCGAATGGAGGTT murE 311022 - 312617 + | UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase murD 312475 - 314061 + | UDP-N-acetylmuramoylalanine--D-glutamate ligase TERM 228 314253 - 314264 + G 100 -5.8 -5.82388 | TTTACCATTTCGGTT CTGC CCGA GCAG TTTTTTTTCCGATTT ftsW 314061 - 315173 + | cell division protein FtsW TERM 229 315317 - 315327 + G 79 -3.2 -5.44119 | opp_overlap 315316 CGCCTTGTACCAAAT TCGG GTA TCGA TTTTTTTACGATACC murG 315173 - 316243 + | N-acetylglucosaminyl transferase TERM 230 316759 - 316772 + G 79 -4.5 -5.18371 | overlap 316744 GTCATCGAGGCTGAT GAGTC TGAT GGCTC TTTTCTTTTCTACGA TERM 231 316850 - 316865 + G 88 -5.4 -5.61824 | ATTACGGCTCGCAAT CTGCTT TGGA AGGCAG TTTTTTTGACTTTTC murC 316246 - 317673 + | UDP-N-acetylmuramate--alanine ligase ftsQ 317700 - 318449 + | cell division protein FtsQ TWT231 319012 - 318515 - | hypothetical protein TERM 232 319003 - 319016 + g 83 -6.7 -5.06414 | opp_overlap 318980 TACATATTACGTAGA CTGAG TGCA CTCAG TTTTTCTTGAAAGAA TWT232 319023 - 319214 + | hypothetical protein TERM 233 319230 - 319270 + G 79 -10.6 -3.57792 | ATGCGATGGGGTATA TCTGCAACATACGGCAGT GATAG ACTTCTGTATGTTGTGGA TTTGAGGGTGGATGG TWT233 319215 - 319733 + | hypothetical protein TERM 234 319861 - 319886 + G 77 -10.4 -3.44325 | AGCGCCAGGTAATTT CAGCTCTGCC GCCCGG GGCGGGGCTG TTGATTATCAGGCGT TWT234 319749 - 320180 + | hypothetical protein TWT235 320186 - 320863 + | hypothetical protein TWT236 320906 - 321382 + | hypothetical protein TWT237 321383 - 321826 + | transcriptional regulator NrdR pyrD 321833 - 322840 + | dihydroorotate dehydrogenase 2 rnhA 323440 - 322955 - | ribonuclease H TWT240 323977 - 323456 - | hypothetical protein TERM 235 325131 - 325150 + G 71 -3.6 -4.8048 | opp_overlap 325125, overlap 325132 AAGAAATAACACGCC TTTCAATG CGCG CGTTGAAG TTTTTGATATAACAG TWT241 324109 - 325449 + | hypothetical protein TWT242 325436 - 325810 + | hypothetical protein ctaC 325880 - 326752 + | cytochrome c oxidase subunit II ctaD 326764 - 328395 + | cytochrome c oxidase subunit I TERM 236 328678 - 328690 + G 70 -9.1 -3.36656 | overlap 328676 TATTTGCGCCATGGA GCTGG TGG CCAGC TGTTCTATCGGTTTT TWT245 328416 - 328835 + | hypothetical protein TERM 237 328958 - 328933 - gf 71 -6.9 -4.18934 | gap 1, opp_overlap 328933 GATCACGTGAAGAAA GCGCT-TGGTGA GTA TTACCATAGCGC TGTTCGCCCGAATCC TERM 238 328998 - 329011 + GF 74 -8.1 -3.92071 | overlap 329000 329001 TGGAACGGTTGTTTG GCTCG GCAG CGAGC TTATGTTCTTTGCTG TERM 239 329000 - 329027 + GF 72 -2.6 -5.04987 | overlap 328998 329001 GAACGGTTGTTTGGC TCGGCAGCGAGC TTAT GTTCTTTGCTGG TTTTTTCGCCATATT TERM 240 329225 - 329235 + GF 74 -5.4 -4.60797 | CTCGTGACTGGGGTG CCAT CGA ATGG TTTTATCTATCCGCC ctaE 328924 - 329547 + | cytochrome c oxidase subunit III TERM 241 329838 - 329850 + GF 76 -7.7 -4.30719 | overlap 329823 329815 329813 GCTGGTGCTGCATCA GCTGA TTT TCAGC TTTCTTCTGGGCGCA qcrC 329505 - 330371 + | ubiquinol-cytochrome c reductase cytochrome c subunit qcrA 330425 - 331408 + | ubiquinol-cytochrome c reductase iron-sulfur subunit TERM 242 331608 - 331620 + G 88 -3.4 -5.75342 | TATTTTCATAAGCGG GGTT TTTCT AACC TTTTTTTTCCAGGCC TERM 243 331804 - 331818 + G 83 -6.4 -5.03314 | GCTTCCATTGGTCTG CACATG CTT CGTGTG TTTTTTACGGGTGCC qcrB 331408 - 333018 + | ubiquinol-cytochrome c reductase cytochrome b subunit TERM 244 333010 - 333020 + F 80 -5.4 -4.93661 | opp_overlap 333010 ATCGTGCACACATCA GATC ATT GATC TTTTGTTCTTGATAT TWT250 333083 - 333577 + | hypothetical protein kasA 334902 - 333667 - | 3-oxoacyl-[acyl-carrier-protein] synthase acpP 335151 - 334903 - | acyl carrier protein fabH 336247 - 335228 - | 3-oxoacyl-(acyl carrier protein) synthase III TERM 245 336110 - 336134 + gr 82 -13.1 -2.83271 | overlap 336107 336114 TATCCACTCGTCACT TGAATTAATCG GAC CGATTAATTCA TCATTGTACACATCC fabD 337229 - 336210 - | acyl-carrier-protein S-malonyltransferase aceE 340014 - 337213 - | pyruvate dehydrogenase subunit E1 TERM 246 337361 - 337349 - G 81 -3.3 -5.44119 | TCGACTTGAAAAAAA CGCCT CGC AGCCG ACCGAGTATCAGAAA TERM 247 338615 - 338646 + g 74 -3.8 -4.93877 | gap 1, overlap 338625 TCAATTTGTTTATCG CTTATTGG-AATGCC CAG GGCATTTCTGAAAAG TTTTATTTCATCAAG TWT256 340098 - 340568 + | thiol-specific antioxidant protein TERM 248 340578 - 340594 + F 75 -6.5 -4.431 | overlap 340580 TCCTAGGGCGGGCCT TGCGCCT CCT GGGCGTA TTTTCTGGATGCGTG TERM 249 341194 - 341226 + G 78 -6.3 -4.56597 | opp_overlap 341223, overlap 341195 CTTGCTGAGCCGGTG AGCCTTTATGACTTT GCA AAAGACTTAAAGGCA TTTTTGCCAGAGACC TERM 250 341195 - 341225 + G 73 -9.8 -3.33744 | opp_overlap 341223, overlap 341194 TTGCTGAGCCGGTGA GCCTTTATGACTTT GCA AAAGACTTAAAGGC ATTTTTGCCAGAGAC TWT257 340714 - 341568 + | hypothetical protein TWT258 341561 - 342262 + | hypothetical protein TERM 251 342437 - 342419 - T 73 -7.4 -4.14392 | overlap 342433 342436 CGGTAAGGGTGAAAA GGTGGTGT AAG AGACCACC AGGGATTGGGGTGAC TERM 252 342691 - 342704 + T 70 -2.5 -5.00765 | GCCTATGGCGTAATG TATAT TCAC ATATA TTTTTCTAGTTAGTT map 343613 - 342744 - | methionine aminopeptidase TERM 253 343591 - 343553 - G 77 -11 -3.14881 | opp_overlap 343544 CAATTTTGGGATCAA CCCATCTTGCGGCGGAAA TAT CTCCCGGCACAAGATGGC CATATGCATTCTTTG panB 344431 - 343613 - | 3-methyl-2-oxobutanoate hydroxymethyltransferase TERM 254 344350 - 344368 + g 71 -7.4 -3.86015 | ATGTAAGACCCACCA GCTTCCTG CCG CAGGAACC TTTATGAAAGCGATG glnA 345876 - 344428 - | glutamine synthetase TERM 255 344660 - 344681 + g 78 -5.1 -5.08731 | gap 1, overlap 344661 344664 TCGTACATATTCTGC T-CAACCGGG CTG CCCGGGTGTA TTTTATTCTTTATTC TERM 256 344661 - 344679 + g 87 -10.2 -4.12859 | overlap 344660 344664 CGTACATATTCTGCT CAACCGGG CTG CCCGGGTG TATTTTATTCTTTAT TERM 257 344664 - 344676 + g 71 -10.5 -2.74944 | overlap 344661 344660 ACATATTCTGCTCAA CCGGG CTG CCCGG GTGTATTTTATTCTT TERM 258 345466 - 345451 - G 76 -4.6 -4.946 | opp_overlap 345462, overlap 345453 ATCAAAGATGAAAAA CTCAGC TTCG GCTGCG AAATACGCTGTATCT TERM 259 345897 - 345911 + H 76 -5 -4.78157 | overlap 345889 345898 CCTTGCGTGCACACC TGTGTA TTG TACACG TTTGTTATTTTTGAT TERM 260 346191 - 346240 + G 78 -5 -5.08601 | overlap 346193 GCAAAACTTGGTATT GGCCCGTTTACGGAAAACGGGT TTTATT ACGATTTTTCCGTAAACGAACC TTTTTCTTCGGATAG TERM 261 346193 - 346211 + G 89 -8.9 -4.70613 | overlap 346191 AAAACTTGGTATTGG CCCGTTT ACGGA AAACGGG TTTTATTACGATTTT thrS 345975 - 347897 + | threonyl-tRNA synthetase TWT263 347906 - 348442 + | hypothetical protein TERM 262 349009 - 348989 - g 73 -9.7 -3.36273 | overlap 348974 348975 GCGCGGGAAGATGAA CTTCCTGCC AGG GCCAGGAAG CTCGGCGCGCCAATT TWT264 348455 - 349318 + | pyridoxine biosynthesis protein TERM 263 349529 - 349561 + G 70 -9.1 -3.4678 | overlap 349530 349532 ACCGCATCATGTCTG GCATGCCTGTGTACG GCA CGTGTGCGGGCATGA TTATGCTATCGACGT TERM 264 349530 - 349560 + G 78 -12.6 -2.67747 | overlap 349529 349532 CCGCATCATGTCTGG CATGCCTGTGTACG GCA CGTGTGCGGGCATG ATTATGCTATCGACG TWT265 349318 - 349884 + | glutamine amidotransferase subunit PdxT TERM 265 350669 - 350655 - g 71 -7.2 -4.03234 | GGGTGTCTATACAAA TCTTTC CGG GAAAGA CCTCGCATGCGAATA TWT266 349927 - 350685 + | hypothetical protein ruvC 350676 - 351227 + | crossover junction endodeoxyribonuclease TERM 266 351415 - 351428 + GF 74 -8.1 -3.85567 | opp_overlap 351405, overlap 351405 TACCAGTCTTCAAGT CCGAG AAGA CTCGG TTTCGCTTTACGGTT TERM 267 351642 - 351613 - gf 72 -2.7 -5.00616 | opp_overlap 351617 TGGTGTTGGAAAAAA GCTTGCCGGAACA ATAG TGTTACAGCTTGC TGGGAAATTGACTTC ruvA 351182 - 351850 + | holliday junction DNA helicase RuvA ruvB 351819 - 352856 + | Holliday junction DNA helicase B TWT270 352878 - 353369 + | hypothetical protein secD 353391 - 355070 + | preprotein translocase subunit SecD secF 355070 - 356038 + | preprotein translocase subunit SecF TWT273 356272 - 356051 - | hypothetical protein TWT274 356225 - 357007 + | hypothetical protein relA 357230 - 359467 + | GTP pyrophosphokinase rpsT 359815 - 359528 - | 30S ribosomal protein S20 TWT277 359880 - 360050 + | hypothetical protein lepA 360093 - 361898 + | GTP-binding protein LepA TWT279 361840 - 362514 + | hypothetical protein TERM 268 363226 - 363240 + G 74 -8.6 -4.0127 | opp_overlap 363215 TACATCTGCTGAATT TCAGAG AGG CTCTGA TTTACTTGTCAATAT dnaJ2 362960 - 364006 + | chaperone protein TERM 269 364420 - 364453 + G 73 -10.3 -2.95126 | gap 1, overlap 364417 CAGGTGGTCGAGTAT TGCACGT-GAGGCTGC CAA GCAGTCACGGCGTGCA TGGTTTCCCGTTGTG TERM 270 364706 - 364718 + G 71 -6.9 -4.0749 | TCCACAGCGAGTGTT GCGGC CTT GTCGC TTGTTAATTTTTTCC TWT281 364040 - 364747 + | hypothetical protein TWT282 364783 - 365106 + | HIT-like protein TWT283 365103 - 365618 + | hypothetical protein era 365605 - 366510 + | GTP-binding protein Era TERM 271 366623 - 366639 + G 72 -5.1 -4.63218 | ACCCTCTTTACACGG TCCAATG GAA CATCGGA TTTTGTTGCCAAGGG recO 366536 - 367261 + | DNA repair protein RecO uppS 367289 - 368038 + | undecaprenyl pyrophosphate synthetase dgt 368048 - 369487 + | deoxyguanosinetriphosphate triphosphohydrolase-like protein dnaG 369484 - 371295 + | DNA primase TERM 272 371332 - 371381 + F 86 -11.8 -3.56142 | gap 1, overlap 371327 TCTGGATGCTTTAGG TGTTCCTTTGTGATATTGCGC AATTTCGCA GCGCAATA-CACAAAGGAAGA TTAATTATTCGTAAA TWT289 371599 - 372492 + | NPL/P60 family secreted protein TERM 273 373692 - 373710 + G 71 -7.4 -3.92075 | TGCCCTCGCCTGGGC CGCAGCAA AGG TTGCTGAG TTTATCGATGCGCGT pyk 372616 - 374037 + | pyruvate kinase TWT291 374200 - 374877 + | two-component system response regulator polA 374893 - 375963 + | DNA polymerase I TERM 274 376501 - 376482 - g 71 -10 -3.18509 | overlap 376479 376480 TGAAAAGATAAAGGA CAGTGACC TGAC GGTCACCG GTAAGGTCATAGAGA rpsA 376141 - 377562 + | 30S ribosomal protein S1 TERM 275 377585 - 377615 + G 83 -10.4 -3.71552 | overlap 377587 377605 TAATGCAGCTCTTCG CACTTACAGGCGGC ATA GCTGCCGGTAAGTC TTGTGTTGCTGGCCT TERM 276 377587 - 377613 + G 86 -13 -3.43722 | overlap 377585 377605 ATGCAGCTCTTCGCA CTTACAGGCGGC ATA GCTGCCGGTAAG TCTTGTGTTGCTGGC coaE 377566 - 378324 + | dephospho-CoA kinase TERM 277 379282 - 379294 + G 72 -4.7 -4.68545 | overlap 379283 TGATGGTAGAGCGCC CGGCG AAC CGCCA TTTTGTCTATTAGAT uvrB 378317 - 380350 + | excinuclease ABC subunit B uvrA 380362 - 383208 + | excinuclease ABC subunit A TERM 278 384767 - 384779 + G 77 -9.1 -3.9461 | opp_overlap 384767 TATTCTTCCACCTAA CAGCG AAT CGCTG TTCTTATTACAGAAG uvrC 383217 - 385040 + | excinuclease ABC subunit C whiA 385050 - 386009 + | putative sporulation regulatory protein TERM 279 386549 - 386537 - g 83 -9.1 -4.27443 | TGATCATCAAAATAA CGCAG TAT CTGCG AGGAATCTCCTCCTC sodA 386094 - 386702 + | superoxide dismutase TERM 280 387216 - 387197 - g 71 -7.8 -3.96148 | opp_overlap 387196 TTCGTGTACTACAAA TTGCCTGG CGCC CCTGGCAA AGGTTTTTGATGATA TERM 281 387569 - 387543 - g 82 -10.9 -3.53012 | opp_overlap 387531 387543 387543 387567, overlap 387544 TTGGGCCCCCTGAAA GGGATCCTCTG TTATT CAGAGGATCCG CTTGTTTCAAGTGAT TERM 282 387543 - 387569 + G 75 -10.9 -2.96298 | opp_overlap 387543 387544, overlap 387531 387543 387567 TTGGGCCCCCTGAAA GGGATCCTCTG TTATT CAGAGGATCCG CTTGTTTCAAGTGAT TERM 283 387543 - 387570 + G 84 -10.7 -3.94634 | gap 1, opp_overlap 387543 387544, overlap 387531 387543 387567 TTGGGCCCCCTGAAA G-GGATCCTCTG TTATT CAGAGGATCCGC TTGTTTCAAGTGATA TERM 284 387568 - 387544 - g 86 -14.4 -2.71712 | opp_overlap 387531 387543 387543 387567, overlap 387543 TGGGCCCCCTGAAAG GGATCCTCTG TTATT CAGAGGATCC GCTTGTTTCAAGTGA gap 386724 - 387737 + | glyceraldehyde 3-phosphate dehydrogenase TERM 285 388537 - 388510 - g 71 -3.6 -4.90778 | gap 1, opp_overlap 388514 388517, overlap 388505 388511 CGGAGGCAAATAAAA TCATTGATTTTGC TAA GCAAAAT-AATGT TGAACTTATACTTCC TERM 286 388796 - 388834 + G 70 -5.3 -4.48987 | gap 1, overlap 388800 TGCGTTTACATTTAT CGGAGGAGGCGATACAGC AGCA GCTGT-TAGCCTTCTTGG TTTTGATTATGGAGA pgk 387744 - 388931 + | phosphoglycerate kinase tpi 388933 - 389814 + | triosephosphate isomerase TERM 287 390012 - 390022 + G 71 -6.8 -4.08485 | overlap 390007 AGATATGTTCGGGGG CGGT ATT ACCG TTTCCTTTGCATCAA secG 389845 - 390141 + | preprotein translocase subunit SecG TERM 288 390575 - 390539 - g 82 -13 -2.93633 | gap 1, opp_overlap 390543, overlap 390543 GCAGAAGATATTAGA GGAAGCCCTGCGTGAGC TCAG GCGC-CGCAGGGCTTCG TAAATGATACGCATT TERM 289 390543 - 390571 + G 81 -12.4 -3.19463 | gap 1, opp_overlap 390543 390539 AAGATATTAGAGGAA GCCCTGCGTGAGC TCAG GCGC-CGCAGGGC TTCGTAAATGATACG TERM 290 390571 - 390543 - g 85 -12.4 -3.32385 | gap 1, opp_overlap 390543, overlap 390539 AAGATATTAGAGGAA GCCCTGCGTGAGC TCAG GCGC-CGCAGGGC TTCGTAAATGATACG TWT304 390177 - 390578 + | putative electron transport protein TWT305 390815 - 390534 - | hypothetical protein TWT306 390891 - 391418 + | hypothetical protein ppa 391406 - 391900 + | inorganic pyrophosphatase devB 392772 - 391897 - | 6-phosphogluconolactonase TWT309 392767 - 393585 + | prolipoprotein diacylglyceryl transferase def 394284 - 393598 - | formylmethionine deformylase TERM 291 394509 - 394526 + G 79 -11.3 -3.34233 | TTTTAGGGGCTGTGC TGCTGGC TATT GCCAGCA TTCTACAGGTTCTCA TWT311 394337 - 395203 + | hypothetical protein TWT312 395408 - 396583 + | glycosyltransferase fabG 396587 - 397303 + | 3-oxoacyl-[acyl-carrier protein] reductase rpmE2 397445 - 397696 + | 50S ribosomal protein L31 type B TERM 292 398290 - 398310 + G 74 -6.9 -4.35581 | CGAGAAATTTATTTA CAATGGGTG TTG CACTTATTG TTTTCGGTCTTTTGC TERM 293 398668 - 398682 + G 76 -4.3 -5.08878 | TGTTGAGGATTATCT CAAAG ACCAC CTTTG TTTTGTTTGTGTATT TWT315 397905 - 398744 + | undecaprenol kinase-like protein TWT317 401015 - 400092 - | hypothetical protein cysS2 398798 - 400150 + | cysteinyl-tRNA synthetase TERM 294 400224 - 400238 + gF 74 -5.7 -4.71223 | GGCAACGCGGTCCTG CAGCT CTTCT AGCTG TTTTATATATTCTAA TERM 295 401958 - 401921 - g 88 -3.7 -5.75945 | gap 1, overlap 401923 ACTGTTCAAAAAAAA TA-GTTTACGGATAAG GCAGAAA CCTATCCATAAACATA AGTTCGACAAAGATG TERM 296 401955 - 401923 - g 79 -7.9 -4.52949 | overlap 401921 TGTTCAAAAAAAATA GTTTACGGATAAG GCAGAAA CCTATCCATAAAC ATAAGTTCGACAAAG TWT318 401040 - 402008 + | protein-L-isoaspartate methyltransferase TWT319 402026 - 402910 + | putative FKBP-type peptidyl-prolyl cis-trans isomerase tatC 403162 - 403929 + | twin-arginine translocase TatC component TWT321 403926 - 404702 + | short chain dehydrogenase TWT322 404972 - 404703 - | hypothetical protein TWT323 405781 - 405134 - | hypothetical protein TWT324 406088 - 405870 - | hypothetical protein TWT325 407068 - 406082 - | deoxyribonuclease TERM 297 406221 - 406209 - G 76 -9.1 -3.80114 | GAGGAATTCATGAAA CCCCT AAA AGGGG AGGGGGTTAGAAATG TERM 298 406706 - 406718 + g 76 -4.8 -4.89852 | TTCAACTCGGTGTGT GGCA TCATT TGCC TTTTTATAGATATCC adh 407213 - 408286 + | zinc-type alcohol dehydrogenase TERM 299 408328 - 408303 - T 95 -13.2 -3.86897 | opp_overlap 408303 CTGAGTTTTTATAAA CGCCCGCCGG GGATAA CTGGCGGGCG TTTTGTTATAGAAGA TERM 300 408303 - 408328 + T 100 -15.4 -4.77165 | opp_overlap 408303 CTGAGTTTTTATAAA CGCCCGCCGG GGATAA CTGGCGGGCG TTTTGTTATAGAAGA dacB 409333 - 408392 - | serine-type D-Ala-D-Ala carboxypeptidase TERM 301 409378 - 409345 - R 100 -16.9 -3.64599 | opp_overlap 409345 GCACGATACCTCAAA TATAGCAGCGGCAAT AGAC ACCGCCGCTGCTATA TTCTTACTGCCTACT TERM 302 409345 - 409378 + r 93 -12.6 -3.73914 | opp_overlap 409345 GCACGATACCTCAAA TATAGCAGCGGC AATAGACACC GCCGCTGCTATA TTCTTACTGCCTACT TWT328 410474 - 409389 - | sugar ABC transporter substrate-binding protein (L-arabinose/D-xylose) TWT329 411732 - 410500 - | sugar ABC transporter permease protein (L-arabinose/D-xylose) TWT330 413269 - 411713 - | sugar ABC transporter ATP-binding protein (L-arabinose/D-xylose) TWT331 413389 - 414165 + | undecaprenyl pyrophosphate synthetase TWT332 414558 - 415415 + | hypothetical protein TWT333 415850 - 415500 - | hypothetical protein TWT334 416624 - 415875 - | ABC transporter ATP-binding protein TWT335 417059 - 416757 - | dioxygenase ferredoxin subunit TWT336 418238 - 417084 - | iron regulated ABC transporter membrane component TERM 303 418105 - 418093 - G 78 -6.3 -4.61231 | opp_overlap 418084 418093 418092 TCATAGGGGTAAAAA TCCTT GCT AAGGA AGTTTTCTACAATGG TERM 304 418197 - 418207 + g 74 -6.8 -4.20025 | TTCAGAACAGAATCT CTCG GAC CGAG TTTGTGTTGGCGATT TWT337 419646 - 418225 - | iron regulated ABC transporter membrane component TERM 305 419379 - 419389 + g 72 -5.4 -4.49556 | GTCGTTCAGTTGAAC GTAC AAA GTAC TTTATTTGGTCAAAA TERM 306 419821 - 419841 + Gr 71 -3.3 -4.86822 | overlap 419822 ACTTTACAGGCCTTG TCACATAAC CCT GTTATATGG TTTTGTTGTATGGTT ctaB 421666 - 420764 - | protoheme IX farnesyltransferase ctaA 419785 - 420840 + | cytochrome AA3 controlling prrotein TERM 307 421217 - 421250 + gF 72 -3 -5.01732 | opp_overlap 421203, overlap 421222 AGGCATGCACCCTGC AAGGCCACCCCAGA CTATGT TCTGGGGGGTTCTC TTTTTTAGAACGATT TERM 308 421222 - 421245 + gF 76 -8.1 -4.18465 | overlap 421217 TGCACCCTGCAAGGC CACCCCAGA CTATGT TCTGGGGGG TTCTCTTTTTTAGAA TERM 309 422006 - 421990 - gfH 71 -9.5 -3.28712 | opp_overlap 421975 421984 421981 TCTTTTGTTTCAGAA GGTTATG CGC CATAACC CCTCTGATCCTTCCT TERM 310 423883 - 423867 - gfH 72 -5.1 -4.67556 | overlap 423870 AGAATATTGTAAAAA CAGCAGA TGC TCTGTTG GGAGGGTGTGGTGAA tkt 421805 - 423901 + | transketolase TERM 311 424328 - 424312 - gf 95 -12.3 -4.13945 | ACTTGTATGTGAAAA TTCCCGC TAC GCGGGAA GGGTTAGAGGCTATC tal 423873 - 424985 + | transaldolase gpi 424990 - 426645 + | glucose-6-phosphate isomerase zwf 426688 - 428151 + | glucose-6-phosphate 1-dehydrogenase TWT344 428902 - 428354 - | hypothetical protein TERM 312 428571 - 428548 - G 76 -11.8 -2.62712 | overlap 428547 428545 CAGTAGATAGAATAT TCTCTAGGGA TGTT TCCCCAGAGA TTCCGAAGCTCTCAG TWT345 429944 - 429063 - | hypothetical protein TWT346 430850 - 430059 - | tRNA/rRNA methyltransferase cysS1 432247 - 430847 - | cysteinyl-tRNA synthetase TERM 313 430963 - 430993 + g 95 -12 -3.98159 | opp_overlap 430981, overlap 430964 430987 TAGAGCGCGCCCTGT CTCTTGCTTCAAGT AAT ACTTGAAGCAAGGC TTTGCTATTATCCTG TERM 314 430964 - 430992 + g 93 -15.5 -2.98173 | opp_overlap 430981, overlap 430963 430987 AGAGCGCGCCCTGTC TCTTGCTTCAAGT AAT ACTTGAAGCAAGG CTTTGCTATTATCCT TERM 315 431831 - 431849 + g 80 -5.9 -5.04597 | overlap 431833 GTTACCTGAACCATC CATCGCC CTGTA GGCGACG TTTTTCTGTATGAGT ispDF 433600 - 432332 - | hypothetical protein TERM 316 433542 - 433532 - G 71 -6.8 -4.09509 | ACCAACTGAGACAAA TGCC TTC GGCA GAGAAGAAGACAGCC TWT349 434089 - 433607 - | transcriptional regulator TERM 317 433701 - 433714 + g 73 -4.5 -4.82901 | opp_overlap 433692 433690, overlap 433711 433712 AAAATACCGCGGGCG CGGGT AAGC ATCCG TTTTTCTCCAGCGGA TWT350 434188 - 434727 + | hypothetical protein argS 436335 - 434677 - | arginyl-tRNA synthetase phoT 437374 - 436565 - | phosphate ABC transporter ATP-binding protein pstA 438242 - 437349 - | phosphate transport system permease protein pstC 439208 - 438309 - | phosphate transport system permease protein TERM 318 438334 - 438346 + g 73 -4.1 -4.82901 | CTTAGGACTTTAATC TGACG ATT CGTTA TTTTTCTGGCAACCA TERM 319 438822 - 438798 - G 72 -2.8 -5.00884 | ATTGCCTGTAAAAAA TGGCAGCCAT GGAAA ATGCGTGCCA AGCCACTCATAAACC TERM 320 438851 - 438836 - G 71 -7.5 -3.93583 | CAAGCCACTCATAAA CCGGC ACCAAA GCCGG AGCAATAACTGTTAC phoS 440361 - 439291 - | phosphate transport system substrate-binding protein TERM 321 440294 - 440276 - G 71 -10.4 -2.60813 | opp_overlap 440266, overlap 440275 440273 GACCCCTCTAAAGAG GTTTTGGA GTT TCCAAAAC ATGAAACAGAAAAAA manC 440556 - 441650 + | mannose-1-phosphate guanylyltransferase rpe 442356 - 441697 - | ribulose-phosphate 3-epimerase TERM 322 442434 - 442415 - R 71 -7.2 -4.0348 | AGACGACATTACAAA CGCACAAA CTGC TTTATGCG CATAAAGTCTAGCCA fmt 443660 - 442656 - | methionyl-tRNA formyltransferase TERM 323 442826 - 442844 + gr 76 -4.6 -4.94147 | opp_overlap 442807, overlap 442806 442803 442837 CGAAACAATCAGAAG GTTGTTTC GCC GAGATAAC TTTTATTCTCTTATT TWT359 445479 - 443605 - | primosome assembly protein PriA metK 446667 - 445480 - | S-adenosylmethionine synthetase TERM 324 445553 - 445568 + g 73 -2.4 -5.24989 | opp_overlap 445553 445554, overlap 445554 ATATCTCGACCGAAA TGGCCG TATG CAGCCG TTTTTTGATATATGG TERM 325 445979 - 445967 - G 91 -7.7 -5.1675 | GGATTTATCAAAAAA GTAGC TTT GCTAC AATCAAGACCGGTTG dfp 447930 - 446677 - | flavoprotein rpoZ 448223 - 447927 - | DNA-directed RNA polymerase subunit omega gmk 449221 - 448307 - | guanylate kinase TERM 326 449185 - 449199 + g 70 -10 -3.04398 | overlap 449184 CCCCTTTTTTTGATG CCGACT GCC AGTCGG GTTTTGGAGGAGGGC pyrF 450151 - 449240 - | orotidine-5'-phosphate decarboxylase carB 453459 - 450148 - | carbamoyl-phosphate synthase large chain TERM 327 450583 - 450570 - G 77 -3.8 -5.09685 | CAACAGACACAAAAA TCGC CCCCGT GCGA GGTAATTCACTAAAC TERM 328 451984 - 451967 - G 82 -7.7 -4.62069 | overlap 451968 TGCCTATCGGAAAAA CCGTGCA TTTT TGCACGA GATAGGCAATCCATA TERM 329 451983 - 451968 - G 70 -9 -3.3692 | overlap 451967 GCCTATCGGAAAAAC CGTGCA TTTT TGCACG AGATAGGCAATCCAT TERM 330 452590 - 452577 - G 74 -8.1 -3.84406 | opp_overlap 452574 CCTCGATTACAACAA CACGG CCGT CCGTG GGGTTTACCGCAAAC carA 454591 - 453446 - | carbamoyl phosphate synthase small subunit TERM 331 454505 - 454495 - G 76 -4.6 -5.03314 | TGCATGTCGAAAAAA CGGC CTC GCCA AATGCAGTACCAACA pyrC 455919 - 454633 - | dihydroorotase TERM 332 455239 - 455221 - G 71 -10.3 -2.59177 | overlap 455220 ATGGCACACATGAAG CCGTGCA TTTGC TGCACGG GCAAGCAGGATATCA efp 456489 - 455932 - | elongation factor P aroD 457002 - 456514 - | 3-dehydroquinate dehydratase aroB 458189 - 457047 - | 3-dehydroquinate synthase aroK 458758 - 458249 - | shikimate kinase aroF 459982 - 458780 - | chorismate synthase aroE 461050 - 460103 - | shikimate 5-dehydrogenase TWT374 462238 - 461051 - | hypothetical protein TERM 333 461203 - 461176 - G 100 -3.4 -6.11243 | gap 1, opp_overlap 461183 ATGTAACAAAAAAAA GCCAT-TTTCCCG GCG CGGGATATATTGC AGCCTTGAGTGCCGC TERM 334 461412 - 461398 - G 82 -7 -4.87665 | GCCTATTTACAAAAA CGCGAG ATA CGCGCG CAAAATCAGACGGAA TERM 335 461605 - 461592 - G 86 -3.1 -5.63517 | overlap 461593 461604 GCGGGAAATAAAAAA CCTTC AACG GAAGA GGCCTGCCTCGGAAG TWT375 462672 - 462235 - | hypothetical protein alaS 465345 - 462703 - | alanyl-tRNA synthetase TWT377 465550 - 465362 - | hypothetical protein rpsD 466171 - 465554 - | 30S ribosomal protein S4 TERM 336 465882 - 465856 - GH 72 -9.4 -3.54424 | overlap 465858 GCCTAGCTTGGGAAA TACTGCGCGC AAAGGCG GCGCGCAGAA CCAAGGCATCAAGTC TERM 337 465880 - 465858 - GH 82 -12 -3.35046 | overlap 465856 CTAGCTTGGGAAATA CTGCGCGC AAAGGCG GCGCGCAG AACCAAGGCATCAAG TERM 338 466622 - 466604 - gH 73 -2.5 -5.24531 | gap 1, overlap 466606 ACTTGCTAGAAAAAA TC-TTGAG GAAG CTCAACGA AATCTTTCAGAAAAG TERM 339 467226 - 467212 - gH 72 -2.8 -5.06103 | ACAAGTGGGAAAAAA TTGGTA GTG TGCCAA AAGATAAAACAAAAT TWT379 466113 - 467474 + | hypothetical protein TWT380 467517 - 468641 + | hypothetical protein holA 469828 - 468899 - | DNA polymerase III delta subunit TERM 340 469728 - 469748 + g 70 -2.5 -4.94972 | overlap 469730 469733 ACATGAACCTCGGGC GCTGACAGG GAA TCTGTTATC TTTTTCCTTATGCTA TWT382 470725 - 469889 - | comE operon protein 3-like protein TERM 341 470361 - 470379 + g 73 -7.4 -4.0492 | overlap 470362 470364 CGTGACATACTGGCC CCACCCTT TAC AAGGGTGC TTTCTATAACACTTG TERM 342 470362 - 470378 + g 75 -10.9 -3.0247 | overlap 470361 470364 GTGACATACTGGCCC CACCCTT TAC AAGGGTG CTTTCTATAACACTT TWT383 472140 - 470722 - | comE operon protein 3-like protein TERM 343 470926 - 470916 - G 87 -6.8 -5.24416 | CAAGCATAAGAAAAA GGTG CGA CACC ATGTCAATTGGTGAG comEA 472718 - 472137 - | comE operon protein 1-like protein TERM 344 472632 - 472618 - G 83 -4.3 -5.42259 | TCAGGGCCAAAAAAA GGTTT TGTAT AAACC AGAATGAGCAGGCCC leuS 475220 - 472800 - | leucyl-tRNA synthetase TERM 345 473251 - 473236 - G 71 -7.6 -3.96497 | opp_overlap 473232 473236, overlap 473227 TTAAAACGATAAGAA TCGACT AACC AGTCGA TATCATTCAATAAGC TERM 346 473944 - 473965 + g 70 -9.5 -3.10245 | opp_overlap 473943, overlap 473946 473948 GAATCGTACAGAATC GGTATTGGG GTCC CCCAATATC TCTGTCTTGAAATAA trpE 476703 - 475261 - | anthranilate synthase component I TERM 347 475862 - 475848 - G 78 -5.7 -4.88388 | ATAATGCCAGAAAAA GCTCT GGGGA AGAGC TAACAAAGTGGCGCG TERM 348 476508 - 476542 + g 73 -7.7 -4.15833 | opp_overlap 476526 CAGATCGAAGACTCA CCGACGGACCAGAGC CAATC GCACTGCGTCGTCGG TTTTGCAGTGGTCGT TWT387 476721 - 478448 + | DedA-like protein TERM 349 478506 - 478486 - g 74 -3.3 -5.00884 | ATCTGTGCGAAAAAA TACAAAACA GCT CGTCCTGTA CGGTCACAAAGCGGT TWT388 478475 - 479590 + | hypothetical protein TERM 350 480458 - 480444 - g 86 -2.8 -5.74684 | GAATAAAAATAAAAA GGATGA TAG TAATCC GCTCTATCTTCTAGC TWT389 479587 - 480795 + | hypothetical protein sseA 481515 - 482423 + | thiosulfate sulfurtransferase TWT391 482522 - 482920 + | hypothetical protein TERM 351 483160 - 483150 - gf 76 -4 -5.04385 | TATATCGGTAAAAAA TAAG CCT CTTA TAGTACTAACAAATA ribD 482917 - 483612 + | 5-amino-6-(5-phosphoribosylamino)uracil reductase TERM 352 483804 - 483816 + GF 74 -3.4 -4.95547 | CTGAGGGAAAGATTC TTGC AAGCG GCAA TTTTGTTGTTCTAAA TWT393 483560 - 484183 + | hypothetical protein TERM 353 485185 - 485171 - g 72 -2.8 -5.04249 | opp_overlap 485171, overlap 485173 TGCTGAAAAAATAAA TGTTCC GCT GGAAAA TTTGATAACAACTCA rnd 484164 - 485339 + | ribonuclease D TERM 354 485796 - 485808 + G 76 -4.8 -4.73613 | opp_overlap 485787, overlap 485793 GACATAGCTGTTGCG CAGC TTGAC GCTG TTTTGTTAGTGATAG dps 485439 - 485942 + | stress induced DNA-binding protein TWT396 486828 - 485944 - | putative DNA glycosylase TERM 355 486445 - 486468 + g 72 -8.9 -3.55444 | CTTAGCTCTTGCCTG GGCCTGATG CTTAAA CATCAGGTC TTTCCAAGATGCCCC TERM 356 486729 - 486759 + g 70 -5.2 -4.52949 | opp_overlap 486717 486736 GTAGCCGCGCACCGG GGGAAAACCTCCCC TGC GGGGAAGAAATCCC TATTTTTTTTCCAAC TERM 357 486752 - 486736 - G 83 -10.1 -4.08767 | opp_overlap 486729, overlap 486717 CGCACCGGGGGAAAA CCTCCCC TGC GGGGAAG AAATCCCTATTTTTT rpi 487323 - 486856 - | ribose-5-phosphate isomerase B TWT398 487936 - 487325 - | hypothetical protein TERM 358 490289 - 490275 - g 76 -4.3 -5.00884 | ACTGTTGGCAAAAAA TTCTG ACGGA CAGAA CACTTTCAAACTCAA pepD 488084 - 490600 + | aminopeptidase TWT400 491280 - 490804 - | hypothetical protein TWT401 492950 - 491280 - | putative ABC transporter ATP-binding protein TERM 359 492440 - 492428 - G 78 -6.2 -4.63932 | GAGCCGTTAACAAAA GCGC ACACA GCGC CACCCTTCGCCTCTC TWT402 493475 - 492957 - | hypothetical protein TERM 360 493263 - 493226 - G 100 -17.4 -3.35679 | opp_overlap 493208 493226 493230, overlap 493230 CTTTCTTATGGAGAA CAAAGATGCTTTTGAT TGCCTG ATCAAAAGCATCTTTG TTTTTTGCAGCAGAT TERM 361 493226 - 493263 + g 100 -18.1 -5.00884 | opp_overlap 493226 493230, overlap 493208 493230 CTTTCTTATGGAGAA CAAAGATGCTTTTGATT GCCT GATCAAAAGCATCTTTG TTTTTTGCAGCAGAT TERM 362 493259 - 493230 - G 95 -12.4 -4.33417 | opp_overlap 493208 493230 493226, overlap 493226 CTTATGGAGAACAAA GATGCTTTTGAT TGCCTG ATCAAAAGCATC TTTGTTTTTTGCAGC TERM 363 493230 - 493259 + g 100 -13.1 -5.04249 | opp_overlap 493226 493230, overlap 493208 493226 CTTATGGAGAACAAA GATGCTTTTGATT GCCT GATCAAAAGCATC TTTGTTTTTTGCAGC ssb 494058 - 493612 - | single-strand binding protein TERM 364 493734 - 493719 - G 76 -4.6 -5.01732 | overlap 493706 AACGCTTGGAAAAAA CGCTGG TCCC CCACCG TAGATCATGACCAAA TWT404 494207 - 494893 + | hypothetical protein nadE 495820 - 494945 - | NAD synthetase orn 496448 - 495894 - | oligoribonuclease TERM 365 496578 - 496605 + r 83 -2 -5.64873 | gap 1, overlap 496569 496581 GAAAGACAAGAGATC TAGGGATGACCTT GGA AAGGTCA-CCAGA TTTTTTGTTGTTCAC TWT407 497551 - 496823 - | hypothetical protein TWT408 499089 - 497542 - | ABC transporter ATP-binding protein TERM 366 498816 - 498804 - G 79 -7.7 -4.41633 | opp_overlap 498803 TATTTGGAAAAATAA CCTGA CTA TCAGG GTCTTGCATAACAAA TERM 367 498909 - 498897 - G 70 -9.1 -3.30159 | GGAATCCGTGTACAA GCCCT GCA AGGGC TAACAGTAAAGTGGA TERM 368 499036 - 499022 - G 83 -6.4 -4.98255 | CCCGAATGAGAAAAA GACCAG TTG CTGATC TCAACATCCTCGCGT TWT409 499762 - 499157 - | hypothetical protein TWT410 500035 - 500991 + | hypothetical protein gatB 502554 - 501040 - | aspartyl/glutamyl-tRNA amidotransferase subunit B gatA 504125 - 502551 - | glutamyl-tRNA(Gln) amidotransferase subunit A gatC 504324 - 504022 - | glutamyl-tRNA(Gln) amidotransferase subunit C ligA 506367 - 504463 - | DNA ligase TERM 369 505696 - 505718 + gr 85 -5.6 -5.34365 | opp_overlap 505696, overlap 505698 ATAGAAGGAAATTGA CTCCAAGTAT CGC ATATTTGGTG TTTTTGTTCTTATAC TERM 370 505698 - 505716 + gr 74 -6.8 -4.28653 | opp_overlap 505696, overlap 505696 AGAAGGAAATTGACT CCAAGTAT CGC ATATTTGG TGTTTTTGTTCTTAT TERM 371 505779 - 505792 + gr 70 -5.3 -4.38927 | ACTGCTTGCTACGCT CCAAT GACA ATTGG TTTATTCTGTCAAAC TERM 372 505860 - 505826 - GR 72 -6.4 -4.36914 | opp_overlap 505828 TCGCGCTTTATAAAA GCTTCGCCGCGAATTT CAA ATATTCCCGGTAAAGC GATCCTGGGAGGGAT trmU 507415 - 506336 - | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase TWT416 508589 - 507438 - | cysteine desulfurase NifS-like protein TWT417 510388 - 508586 - | hypothetical protein TERM 373 510160 - 510145 - GH 100 -5.4 -5.94713 | overlap 510146 ACTCCACAAAAAAAA GCTGCT GCAA AACAGC TGAGGCAAGTAAAAA TWT418 510253 - 511977 + | hypothetical protein TWT419 511871 - 513067 + | hypothetical protein TWT420 513989 - 513051 - | cation efflux protein gpsI 516233 - 514017 - | polynucleotide phosphorylase/polyadenylase TERM 374 515284 - 515306 + g 72 -2.8 -5.07011 | gap 1, opp_overlap 515296 CGACCCGAGAGCACT GCGTCATGA AAAGCA TCAT-ACGC TTTTTGCTTTATCTC rpsO 516541 - 516269 - | 30S ribosomal protein S15 atpC 516997 - 516713 - | ATP synthase epsilon chain atpD 518432 - 516999 - | F0F1 ATP synthase subunit beta TERM 375 518321 - 518349 + g 72 -8.1 -3.67597 | overlap 518322 AACGGTTTACACGGG TCTTCAAGGCGTT AAA AACGCCAGGAAGG TTATTGCGTGAAAAC atpG 519482 - 518472 - | ATP synthase gamma chain atpA 521130 - 519502 - | F0F1 ATP synthase subunit alpha atpH 522124 - 521141 - | ATP synthase delta chain atpF 522437 - 521919 - | F0F1 ATP synthase subunit B atpE 522686 - 522459 - | ATP synthase C chain atpB 523545 - 522730 - | F0F1 ATP synthase subunit A TERM 376 522943 - 522930 - G 75 -6.7 -4.39448 | opp_overlap 522930 522929 AAAGAACCAAAAGAA GATGG CCGG CCATC ATATTCATAGTTAAC TWT431 523983 - 523546 - | hypothetical protein TERM 377 524006 - 524020 + r 72 -2.8 -5.01042 | CATTATTTCTCAAGG TTACAC CCG GTGTTA TTTTTAATTTCGATT rfe 525124 - 524024 - | undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase TERM 378 524210 - 524236 + g 75 -3 -5.25803 | AACAGAAGAGTGTCC CATATGCAGCAT CCT ATGGTGTAGATG TTTTTTATCGGGATT TERM 379 524623 - 524603 - G 89 -4.7 -5.65927 | overlap 524605 TATGTAAACAAAAAA CACCCCATT ACC AATGAGGCA GACACCAGCAGCCAG TERM 380 524621 - 524605 - G 77 -7.3 -4.45696 | overlap 524603 TGTAAACAAAAAACA CCCCATT ACC AATGAGG CAGACACCAGCAGCC TERM 381 524873 - 524848 - G 72 -6.3 -4.31329 | gap 1, overlap 524849 CTAAAAATCCCAAAA GCGTTATAACAG AAA CTGCTATAAC-C AGGCTTGTTAGAACC TWT433 525848 - 525171 - | hypothetical protein TERM 382 525669 - 525683 + g 82 -7 -4.86731 | overlap 525670 AACCAAAACGGGAGG AGCCGC GGT GCGGCC TTTTATTTCCAGAAG TERM 383 525670 - 525682 + g 79 -10.5 -3.51557 | overlap 525669 ACCAAAACGGGAGGA GCCGC GGT GCGGC CTTTTATTTCCAGAA hemK 526754 - 525897 - | protoporphyrinogen oxidase prfA 527801 - 526758 - | peptide chain release factor RF-1 TERM 384 526915 - 526927 + g 76 -4.7 -4.88067 | TCAGAGCGATCCATG GCCCG TAT CTGGC TTTTTCTCGCTGCAT TERM 385 526937 - 526948 + g 73 -2.2 -5.22943 | TCTGGCTTTTTCTCG CTGC ATGA GTAG TTTTTTCAATTTCAT rho 529241 - 527877 - | transcription termination factor Rho thrB 530319 - 529312 - | homoserine kinase thrC 531412 - 530360 - | threonine synthase thrA 532888 - 531419 - | homoserine dehydrogenase TWT440 532934 - 533845 + | hypothetical protein TERM 386 533889 - 533862 - T 100 -16.4 -3.82664 | AGAGACACAAGACAA TAGCGGCACACA GAAG TGCGTGCCGCTA GTCAGGCAAAACAGG TERM 387 533946 - 533918 - T 71 -10.3 -2.71325 | gap 1, opp_overlap 533920 533940, overlap 533915 533914 GGATTTAGAAATCCA TCCCGGCACCGG GATCGG CCGG-GCCAGGA GCAGGCTTTGGCTCA groEL 535529 - 533907 - | chaperonin GroEL TWT442 535782 - 536420 + | hypothetical protein TWT443 537192 - 536650 - | hypothetical protein xthA 538068 - 537211 - | exodeoxyribonuclease III cdsA 539040 - 538198 - | phosphatidate cytidylyltransferase frr 539621 - 539076 - | ribosome recycling factor TERM 388 539567 - 539553 - G 73 -4.2 -4.87665 | opp_overlap 539555 539560, overlap 539555 GTGTATGGACAAAAA CTGCTC CTT GAGAAG CTCAATTGTTTTGTT TERM 389 539560 - 539572 + g 75 -6.3 -4.48997 | opp_overlap 539553 539555, overlap 539555 GACAAAAACTGCTCC TTGAG AAG CTCAA TTGTTTTGTTCATTC pyrH 540480 - 539785 - | uridylate kinase tsf 541312 - 540491 - | elongation factor Ts rpsB 542188 - 541343 - | 30S ribosomal protein S2 TWT450 542320 - 543114 + | hypothetical protein TWT451 543761 - 543129 - | hypothetical protein xerC 544863 - 543913 - | integrase/recombinase TERM 390 544815 - 544801 - G 72 -5.6 -4.51363 | opp_overlap 544814, overlap 544793 544802 TATTAAACAGCAAAA CCCCTC GTT GAGGGT GTCGCCGCAGGGGCA smf 546069 - 544870 - | nucleotide-binding protein comM 547622 - 546087 - | competence protein ComM TERM 391 546290 - 546273 - G 73 -11.3 -2.57931 | opp_overlap 546272, overlap 546272 GGCACCGGGGAGAAT TGGCTGC CTCT GCAGCCA GTCACTTGACGCCTG TERM 392 546915 - 546937 + g 76 -8.4 -4.17048 | opp_overlap 546914 546915 TAGATCTGGGAGAAG TGCTGGCAGG CGG CTTGCAAGCA TTGTTTTCCCGGAAC TWT455 548158 - 547619 - | hypothetical protein TERM 393 548032 - 548076 + g 75 -10.9 -3.01745 | opp_overlap 548034, overlap 548024 548028 548048 AGCCGTTGTTGGCAC AAGTCAACTGTGTAGATACAG AAA CTGTATTTACACAATTGACAC TCTCCTTGTTAGCCA TERM 394 548074 - 548034 - G 100 -17.9 -3.28712 | opp_overlap 548024 548032 548028 548048 CCGTTGTTGGCACAA GTCAACTGTGTAGATACAG AAA CTGTATTTACACAATTGAC ACTCTCCTTGTTAGC lepB 549079 - 548387 - | signal peptidase I rplS 549423 - 549076 - | 50S ribosomal protein L19 trmD 550220 - 549516 - | tRNA (guanine-N1-)-methyltransferase rimM 550801 - 550253 - | 16S rRNA processing protein TWT460 551031 - 550801 - | hypothetical protein rpsP 551474 - 551028 - | 30S ribosomal protein S16 TERM 395 551198 - 551211 + g 72 -5.2 -4.63218 | opp_overlap 551188 ACACAGGCTGCTCAA CCCG TGAGAC CGGG TTTTCTTCACCGCAA TERM 396 551555 - 551528 - R 71 -3.4 -4.83722 | overlap 551530 551532 551537 AACAGTATAACAAAA CTGAGTATATCC AAGC GAATACACCCGG ATACATTGTATAACG ffh 553038 - 551692 - | signal recognition particle protein lipB 553115 - 553822 + | lipoate-protein ligase B lipA 553841 - 554896 + | lipoyl synthase ogt 554898 - 555452 + | methylated-DNA--protein-cysteine methyltransferase TWT466 556790 - 555738 - | hypothetical protein TWT467 557440 - 556808 - | hypothetical protein TERM 397 557805 - 557783 - R 86 -13.6 -3.25729 | opp_overlap 557783, overlap 557773 TACAAGCAGCACGAA TATACCCCTT GCA AAGGGGTATA TTTCGGGTAATCTAG TERM 398 557783 - 557805 + r 93 -13.6 -3.63068 | opp_overlap 557783 557773 TACAAGCAGCACGAA TATACCCCTT GCA AAGGGGTATA TTTCGGGTAATCTAG TWT468 558749 - 557823 - | hypothetical protein TERM 399 557912 - 557933 + g 71 -7.4 -3.86194 | opp_overlap 557911 557912 ATGAGATAAAAAAGC CCCAAAAA ATGCGC TTTTTGGG TTTATAGAAAAGGTT TERM 400 558341 - 558313 - G 74 -10.3 -3.14051 | overlap 558311 TTACCTTTATCAATA CCAGTTCCAACCA CTC CGGCTGCAACTGG CGCAGAAGGTTGAGG TERM 401 558547 - 558531 - G 71 -7.9 -3.85698 | opp_overlap 558523 TTTTCTGCTCATAAA GCGCGGA AAA TCCGGGC TGGAGGGGTCTGTTG nadD 559347 - 558742 - | nicotinic acid mononucleotide adenylyltransferase TWT470 559564 - 559325 - | hypothetical protein TERM 402 559491 - 559477 - G 82 -2.8 -5.58074 | overlap 559479 CAAGCAGCAAAAAAA TCGCTG GTT CAACAA ATGGAATGTGACCAA obgE 560967 - 559630 - | GTPase ObgE rpmA 561215 - 560967 - | 50S ribosomal protein L27 TERM 403 561096 - 561084 - G 83 -10.5 -3.78953 | AGTGCCAGGATGAAA GCGCG TAC CGCGC TGACGAACAAGTATC rplU 561570 - 561256 - | 50S ribosomal protein L21 rng 563343 - 561694 - | ribonuclease G TERM 404 563160 - 563140 - G 77 -10.5 -3.34522 | overlap 563145 563148 AGAGCCGCGAACCAA CATAACACG CTG CGTGTTACG CCGTAAAATTCCTGT TERM 405 563216 - 563238 + g 86 -2.6 -5.75342 | overlap 563197 CTACGTTTTGATTGA CGGAGAGG CGTGATA TCGCTCCG TTTTTTTTGCGAGAC ndkA 563971 - 563561 - | nucleoside diphosphate kinase TERM 406 564262 - 564251 - R 82 -5.8 -5.19251 | opp_overlap 564250 CAACAGCAATAAAAA TCCC TGAA GGGA ATCTGTCAAATGGCA folC 565755 - 564370 - | dihydrofolate synthase TERM 407 565013 - 565023 + g 74 -8.2 -3.96624 | TCGAGTATTTGCCCT CCCG CAA CGGG TTTGTAATCACAGTC TERM 408 565616 - 565647 + g 76 -8.8 -3.66772 | ACAGTTGTTTTCCCA TTTGTTCCGGTGAT GTGA ATTACCGGAGCACA TTCTTGAGGATTTGA ileS 569041 - 565841 - | isoleucyl-tRNA synthetase TERM 409 568184 - 568167 - G 75 -2.7 -5.21709 | overlap 568168 568179 TTGCAGAGTAAAAAA TCAGAAT TAGA ATTCTGC CGAGCAGAAGAAACA TERM 410 568458 - 568473 + g 73 -7.6 -4.07885 | opp_overlap 568457 568471 CCCTCGTATATAACC CCCTTT TTGT AAAGGG TTTTAAAAGCCCATA TERM 411 571301 - 571286 - g 72 -4.8 -4.58685 | AAACGCCCTCAAAAA TTTTGA TCAC TCAAAA GCGCTTGACACTACA valS 569208 - 571778 + | valyl-tRNA synthetase clpX 573041 - 571770 - | ATP-dependent protease ATP-binding subunit TERM 412 572420 - 572384 - G 73 -9.5 -3.30124 | opp_overlap 572376, overlap 572385 CCGTACCCTCTAGAA TTTTCAGGAGAGCCTGT TGA ACACCCTCTCCTGAAAC ATCCCGCGTAATTGA TERM 413 572419 - 572385 - G 80 -13 -2.57931 | opp_overlap 572376, overlap 572384 CGTACCCTCTAGAAT TTTCAGGAGAGCCTGT TGA ACACCCTCTCCTGAAA CATCCCGCGTAATTG TERM 414 572897 - 572878 - G 74 -7.2 -4.36914 | gap 1, opp_overlap 572878, overlap 572881 TTTCTCTTGATAAAA GCATCTTGC TTC GCAAGA-GC CTCATTTCTTCTATC TERM 415 573030 - 573016 - G 75 -6.4 -4.40561 | opp_overlap 572991 572989 573018, overlap 573013 573018 TTTCCGCAAAAAGAA CACCGA TAT TCGGTA TCATCCGTCAAGCAT clpP2 573674 - 573051 - | ATP-dependent Clp protease proteolytic subunit clpP1 574228 - 573686 - | ATP-dependent Clp protease proteolytic subunit TWT482 575427 - 574225 - | hypothetical protein TERM 416 574520 - 574507 - G 70 -2.3 -5.08088 | AATGGCCAATAAAAA CACCG CTGT CGGCA TATGCCATATCGAAG TERM 417 575261 - 575251 - G 79 -2.4 -5.52986 | overlap 575253 ACCGGATGAAAAAAA CTGG GAT CCCG GGGGGGATGACGAGT tig 576737 - 575424 - | trigger factor TERM 418 577236 - 577221 - R 72 -2.6 -5.06414 | CCTGTGTAACAAAAA TTTCTG GTCA CAAAAA TATTCTGAACACAGC TWT484 579331 - 577442 - | 1-deoxy-D-xylulose-5-phosphate synthase TWT485 580015 - 579359 - | hypothetical protein TERM 419 579629 - 579619 - G 85 -6.8 -5.04222 | GAAGGAAACCAAAAA CAGG CAT CCTG AGCAATACGGAAACC TWT486 580642 - 580019 - | hypothetical protein dut 581027 - 580587 - | deoxyuridine 5'-triphosphate nucleotidohydrolase TWT488 581100 - 581567 + | hypothetical protein TWT489 581912 - 581634 - | hypothetical protein TWT490 582014 - 582976 + | hypothetical protein TERM 420 583650 - 583640 - g 74 -5.4 -4.63107 | AGCAAATAATGAAAA TCCT GCC AGGA CCTGATTTTCCTACA TERM 421 583935 - 583905 - g 76 -2.5 -5.38047 | overlap 583932 CAGTGACAGAAAAAA CGGCTTAAAGCTT GTTAT AGGAATTAAGCCG AACTTTTCGCCAAAT TERM 422 584950 - 584967 + G 78 -6.3 -4.7261 | GGGGCCGCTAGAGGT GTATCCA GTTG TGGGTAC TTTGTTTTCATAACT TERM 423 585323 - 585311 - g 73 -7.7 -4.11692 | TAGCCATTGGCAAAA GCAGT GTG ACTGC AAAAAGTTGTGCAGG gyrA2 582973 - 585447 + | DNA topoisomerase IV subunit A gnd 587150 - 585720 - | 6-phosphogluconate dehydrogenase TERM 424 588641 - 588621 - g 95 -11.3 -4.64766 | TGCATAGTGCAAAAA CTGTATTTG ATT CAAATACAG AACGACACAAAAACA ptrB 587483 - 589756 + | protease II gyrB2 591719 - 589731 - | DNA topoisomerase IV subunit B TERM 425 589846 - 589820 - G 95 -10.9 -4.64598 | TAAGGAGCGCAAAAA TGTCTGAAGCC TGTTG GGCATCAGACA TCCTAATCCTAAGAA TERM 426 590569 - 590589 + g 75 -9.9 -3.48593 | overlap 590562 590562 GTTTTGTATTTTGGA TCTTCAAAA AGT TTTTGAAGA TTATCTGCCACGATA TERM 427 592061 - 592077 + G 70 -9.5 -3.03243 | opp_overlap 592058 592056 592067 GGTGATAATACAGAG TGCAAAG CTG CTTTGCA TCTTGAAAGCTGCGT TWT495 591764 - 592438 + | alanine racemase-like protein alr 592488 - 593648 + | alanine racemase cobQ 594411 - 593632 - | cobyric acid synthase TWT498 595787 - 594402 - | UDP-N-acetylmuramyl tripeptide synthase-like protein TERM 428 594573 - 594586 + g 72 -3.1 -4.95547 | gap 1 GTCAAAATTTGATTT GCGTAG CAC CT-CGC TTTTCTTGTTATAAA rpoD 596952 - 595789 - | RNA polymerase sigma factor glyQS 597010 - 600084 + | glycyl-tRNA synthetase alpha chain and beta chain pepB 600103 - 601671 + | aminopeptidase A/I TERM 429 602854 - 602841 - g 80 -6.7 -4.91109 | GGTCCAGCACAAAAA CAAGG ACGT CCTTG GGGTTCATATGGTCG lpd 601678 - 603030 + | dihydrolipoamide dehydrogenase TERM 430 604472 - 604492 + G 72 -8.3 -3.71848 | CCGTGGCGTTTTTTG CCCTATCGT ACG ACCATAGGG TTATTGATGGCGCGG sucB 603184 - 604569 + | dihydrolipoamide succinyltransferase component E2 TERM 431 604791 - 604765 - g 80 -7.2 -4.58563 | TAAGCAGAAAAACAA CTGCCCAGGCAA CAG CTGCATGGGGAG AACCATTGGGAGCCG TWT504 604557 - 605060 + | hypothetical protein ddlA 606117 - 605074 - | D-alanine--D-alanine ligase gpsA 607136 - 606117 - | glycerol-3-phosphate dehydrogenase (NAD(P)+) TWT507 607794 - 607069 - | acyltransferase family protein murA 609116 - 607791 - | UDP-N-acetylglucosamine 1-carboxyvinyltransferase TERM 432 609137 - 609171 + r 71 -10.1 -3.25234 | gap 1, opp_overlap 609135 609131, overlap 609135 609131 609161 CTCAACTAACACATC GTGTTCCCTAGAGGTC AATA GACG-CTAGGGAACGC TATTGAGTTTCTTAG TWT509 610114 - 609161 - | tellurium resistence protein TerC-like protein TERM 433 609584 - 609553 - G 78 -5.7 -4.84359 | CTATCGCTATAAAAA CGGCAACCATCGG GGTCCA CCGTCTGCTGCCG CGAGGTCCGGTTCTA TERM 434 610033 - 610013 - G 75 -6.1 -4.39386 | overlap 610015 GCCAAAGCACCAAAA CAGAGCTTC TTT GAAACTCGG CACGGCAGGTCGACG dnaE 613770 - 610276 - | DNA polymerase III subunit alpha TERM 435 612734 - 612716 - G 75 -3 -5.2189 | overlap 612718 GCAACTATCAAAAAA TAGCCAGC ATA GCCAGCTT CTTGAACAACACGAA TWT511 614691 - 613780 - | pseudouridylate synthase-like protein TERM 436 613897 - 613913 + g 73 -4.4 -4.74504 | gap 1 AAAGCTCAAGTGATA GGC-GTG AAGC CACTGCC TTTTTAGATTCACCT lpsA 615224 - 614772 - | lipoprotein signal peptidase TERM 437 615153 - 615127 - G 76 -4.3 -5.00467 | opp_overlap 615127 GGAATAACAATAAAA TCGCGCGCAAG ATAAG CATGCGCAAGA TACTTGGTAACCTGA TERM 438 615237 - 615179 - G 71 -3.9 -4.87665 | gap 1 CCTGATCCAGAAAAA CTAAAAAACCCACCAGA-GCGTAGAACC GCAG GGTTCTAGTCGTCAAGAGGGGTTCTTAG GCTCTAGGTCACGCA TWT513 615802 - 615221 - | cell division protein DivIVA-like protein TERM 439 615849 - 615818 - R 70 -2.2 -5.03145 | opp_overlap 615826, overlap 615826 GAACTGCTCAAAAAA CCAGAATAGAGAAG TTTA CTCCTCCTTCTTGG ATTCGGTGCTTATGG TWT514 616204 - 615833 - | hypothetical protein TERM 440 616348 - 616334 - R 72 -5.7 -4.4009 | GCCTAGCGGAGAAAA TCTGG GACAT CCAGA CCATCTTCTTCAAAT ftsZ 617406 - 616321 - | cell division protein FtsZ TWT516 617927 - 619201 + | hypothetical protein uvrD 620997 - 619240 - | DNA helicase II TERM 441 621619 - 621609 - gR 76 -2.4 -5.27335 | TCCCTCAAAGAAAAA TGGG AGA CCCT GGTAGAAGATGAAGA TERM 442 621846 - 621820 - gR 75 -11 -3.03034 | opp_overlap 621827, overlap 621817 621822 AAAGTGCAGAAAGCA TACTAAAGGCAT ATG AAGCCTTTAGTA CAACCACTCATGATA TWT518 620991 - 622253 + | macrolide 2'-phosphotransferase-like protein TWT519 625198 - 622277 - | putative DNA helicase II TERM 443 624943 - 624973 + g 70 -5.2 -4.48072 | overlap 624944 GTATTGCAAGGGATT TCTGCAGGCGGGAT GCC AACTCGCCCGCGGC TTTTCTGGTAAATGT TWT520 628176 - 625195 - | DNA helicase TERM 444 625416 - 625404 - G 71 -7.7 -3.86822 | CAACCGCCGGATAAA TCAGC ATA GCTGA CGGTAAAGTCTCGTA TERM 445 627413 - 627385 - G 72 -4.8 -4.64861 | gap 1, opp_overlap 627370 TGTTTTTAAAACAAA CAATTTCTC-TGA AAAG TCAAGAAAAATTG AGGGGGAGGCGCTTC TERM 446 627516 - 627498 - G 72 -3 -5.02074 | opp_overlap 627486, overlap 627500 CGAGTGCCGAAAAAA GGCGCATA TGT TCTGCGGC AAGCTCTTGCGCCTC TWT521 629125 - 628514 - | hypothetical protein TERM 447 629420 - 629398 - g 86 -14.2 -3.1315 | overlap 629390 ACAAGAATCGCAACA GGTCGACCCT ACC AGGATCGACC CAATTCACCGAATAT TERM 448 629989 - 629973 - g 70 -2.1 -4.98857 | ACCCAATTACAAAAA GCGGTCG ATG CTACTGC TCAGGGCTTTGAGCG TERM 449 630425 - 630437 + G 70 -4.8 -4.37886 | GGGTATTTGTAAGGC CTCG CAAAA CGAG TTTTATAGAAGATAC pepQ 629379 - 630737 + | peptidase TERM 450 631492 - 631460 - gf 89 -9.1 -4.68779 | opp_overlap 631481, overlap 631461 AACAAAAGAAAAGAA GGCCTCTTACAACTC ATG GAGCCGGAAGAGGCA AGAAAACTTAGGCTT TERM 451 631491 - 631461 - gf 85 -12.6 -3.37607 | opp_overlap 631481, overlap 631460 ACAAAAGAAAAGAAG GCCTCTTACAACTC ATG GAGCCGGAAGAGGC AAGAAAACTTAGGCT TERM 452 631661 - 631693 + GF 76 -12 -2.61681 | overlap 631660 TGTGTGGCATTACCA CCCTATGACCCACC GACCG GGAGGTTCATAGGG GTTGTCCACTTCCAG mgtE 630716 - 631981 + | Mg2+ transporter TWT524 631881 - 632462 + | hypothetical protein TERM 453 633150 - 633182 + GT 77 -10.7 -3.34222 | opp_overlap 633150 TCCCGGCACAGGAGA TGCGGCAATAACTAT TGC ACAGTTATTGCCGAA TTCTGAAGTGCTAGT TERM 454 633182 - 633150 - gT 82 -12.9 -2.85351 | opp_overlap 633150 TCCCGGCACAGGAGA TGCGGCAATAACTAT TGC ACAGTTATTGCCGAA TTCTGAAGTGCTAGT mrp 632416 - 633585 + | ATP-binding Mrp protein truA 634645 - 633698 - | tRNA pseudouridine synthase A rplQ 635066 - 634527 - | 50S ribosomal protein L17 rpoA 636065 - 635082 - | DNA-directed RNA polymerase subunit alpha rpsK 636476 - 636084 - | 30S ribosomal protein S11 rpsM 636854 - 636480 - | 30S ribosomal protein S13 rpmJ 637008 - 636889 - | 50S ribosomal protein L36 infA 637232 - 637011 - | translation initiation factor IF-1 TWT533 638165 - 637302 - | 4-amino-4-deoxychorismate lyase adk 638728 - 638168 - | adenylate kinase secY 640053 - 638728 - | preprotein translocase subunit SecY rplO 640557 - 640075 - | 50S ribosomal protein L15 rpmD 640751 - 640554 - | 50S ribosomal protein L30 rpsE 641583 - 640723 - | 30S ribosomal protein S5 rplR 641939 - 641580 - | 50S ribosomal protein L18 TERM 455 641699 - 641689 - G 72 -8.2 -3.78233 | opp_overlap 641694, overlap 641684 ACACCAACAGCCAAA GCCC TCT GGGC AACTAGCTTTCCAAC rplF 642472 - 641936 - | 50S ribosomal protein L6 TERM 456 642142 - 642112 - G 73 -7.5 -4.14345 | CAACACCAAACGAAA CACCCGGTACTGG ATCGA CAAAAACCGGGTG AGAGAAACCTAGGGC TERM 457 642274 - 642292 + g 73 -10.2 -3.08438 | TTAGCGCTCTGGTAA GCCCATGC AGG GCACGGGC TGTTCGGCTATCGTC rpsH 642873 - 642475 - | 30S ribosomal protein S8 rplE 643454 - 642903 - | 50S ribosomal protein L5 rplX 643792 - 643451 - | 50S ribosomal protein L24 TERM 458 643540 - 643527 - G 80 -6.7 -4.77165 | opp_overlap 643535 GTCTTTACAAGAAAA CCAAC CTTC GTTGG CGCACCGGTTTCAGG rplN 644166 - 643795 - | 50S ribosomal protein L14 rpsQ 644524 - 644264 - | 30S ribosomal protein S17 rpmC 644784 - 644521 - | 50S ribosomal protein L29 TERM 459 644632 - 644618 - GR 86 -11.4 -3.70149 | opp_overlap 644609 CGCACAGCACGCAAA CGCGCA TTG TGCGCG AGCTGCCCGGTTGCA rplP 645178 - 644747 - | 50S ribosomal protein L16 rpsC 645837 - 645175 - | 30S ribosomal protein S3 rplV 646199 - 645840 - | 50S ribosomal protein L22 rpsS 646633 - 646199 - | 30S ribosomal protein S19 rplB 647318 - 646485 - | 50S ribosomal protein L2 rplW 647637 - 647326 - | 50S ribosomal protein L23 rplD 648380 - 647634 - | 50S ribosomal protein L4 rplC 649002 - 648370 - | 50S ribosomal protein L3 rpsJ 649320 - 649012 - | 30S ribosomal protein S10 ftsY 650148 - 649480 - | cell division protein FtsY TERM 460 649614 - 649601 - G 82 -5.9 -5.27023 | overlap 649602 ACTTGAAAAATAAAA CCCGC CTTT GCGGA CGAGTCAGTCTTGGA TERM 461 649671 - 649687 + g 75 -6.5 -4.41206 | overlap 649673 649681 CCTCAAGGAATGATC TAGCCTG AGT CAGGCCA TTTTGTCCGGTAGTT TWT557 651016 - 650315 - | branched-chain amino acid ABC transporter ATP-binding protein TERM 462 650785 - 650761 - G 73 -7.7 -4.08216 | overlap 650762 TCATGCCTGGGAAAA CCCCCCTCCCC TCT GGGGACTGGGA AATACCAGAAAGAAC TWT558 651835 - 651023 - | branched-chain amino acid ABC transporter ATP-binding protein TERM 463 651202 - 651218 + gr 81 -3.7 -5.40072 | CACGGATTTTTAAAA TTAGCTC CAC GAGTTGA TTTTTTTCAGCAGGA TERM 464 651251 - 651239 - GR 76 -9.1 -3.80573 | opp_overlap 651239 TTCAGCAGGATTAAA GCCAG CTG CTGGC TCATCTAAGCAAAGC TERM 465 651444 - 651456 + gr 70 -4.8 -4.46926 | opp_overlap 651437 GTTCTAAAGAGCGCA CCCA ATATA TGGG TTTTGTGATGCACTC TERM 466 651509 - 651499 - GR 71 -6.8 -4.08216 | CGACGTTCTCTAAAA CGGT CAT ACCG CCGAATAGCCGAATA TWT559 652901 - 651807 - | branched-chain amino acid ABC transporter permease protein TWT560 653902 - 652898 - | branched-chain amino acid ABC transporter permease protein TERM 467 653894 - 653929 + g 80 -6.9 -4.5954 | opp_overlap 653896 653897 653904, overlap 653897 653900 AAGATAATCCAAACT AAGCAACAAACCGGA CCAGAC TCCGGTTTGTTGTGC TTTTATCTACTGTAC TERM 468 653927 - 653896 - G 86 -11.7 -3.58177 | opp_overlap 653894 653897 653900, overlap 653897 653904 GATAATCCAAACTAA GCAACAAACCGGA CCAGAC TCCGGTTTGTTGT GCTTTTATCTACTGT TERM 469 653897 - 653926 + g 100 -15.2 -3.23165 | opp_overlap 653896 653897 653904, overlap 653894 653900 ATAATCCAAACTAAG CAACAAACCGGA CCAGAC TCCGGTTTGTTG TGCTTTTATCTACTG TERM 470 653926 - 653897 - G 90 -15.2 -2.74183 | opp_overlap 653897 653894 653900, overlap 653896 653904 ATAATCCAAACTAAG CAACAAACCGGA CCAGAC TCCGGTTTGTTG TGCTTTTATCTACTG TERM 471 653900 - 653923 + g 86 -11.1 -3.74012 | opp_overlap 653897 653896 653904, overlap 653897 653894 ATCCAAACTAAGCAA CAAACCGGA CCAGAC TCCGGTTTG TTGTGCTTTTATCTA TERM 472 653919 - 653904 - R 72 -6.1 -4.37247 | opp_overlap 653900 653897 653894, overlap 653897 653896 AAACTAAGCAACAAA CCGGA CCAGAC TCCGG TTTGTTGTGCTTTTA TWT561 655155 - 653959 - | branched-chain amino acid ABC transporter substrate-binding protein TERM 473 655127 - 655110 - G 76 -4.7 -4.89477 | overlap 655111 655112 CGCTGAAGAACAAAA GCGCGGC AGAA GCCGCAA ACAGAACACGAACCC rnc 655896 - 655225 - | ribonuclease III TERM 474 655266 - 655284 + g 75 -3 -5.26875 | opp_overlap 655249 655263 CAAGTGCAGACATTG CAGCCGCA ACT TGAGCCTG TTTTTTGCTTGACCC rpmF 656094 - 655897 - | 50S ribosomal protein L32 TERM 475 655996 - 655986 - G 79 -4.6 -5.15969 | GCGGAAGGTAAAAAA CAGG TCT CCCG CGCTCCTCCAGCCTG TERM 476 656315 - 656297 - H 70 -5.2 -4.5123 | overlap 656300 AATCCACTAAACAAA TAGCCCGC GGT GCGAGATA ATACCGTCTCGGTCA TWT564 656356 - 657111 + | hypothetical protein TWT565 658094 - 657564 - | pantetheine-phosphate adenylyltransferase TERM 477 658113 - 658078 - G 70 -9.1 -3.39784 | overlap 658079 GTACCCGGAACAACA GCTATCCTGTTACTC ATCGCA GAGTATCAGGATAGA ACATCTAGATATAAA TERM 478 658112 - 658079 - G 78 -12.6 -2.63549 | overlap 658078 TACCCGGAACAACAG CTATCCTGTTACTC ATCGCA GAGTATCAGGATAG AACATCTAGATATAA recG 660521 - 658215 - | ATP-dependent DNA helicase TERM 479 659653 - 659634 - GH 70 -2.1 -5.03747 | overlap 659623 659635 AAATGCCTCAAAAAA GCGCAAA CTTTCT TTTGCGG CCTCAAGCTCTTCGT aroA 660181 - 661641 + | 3-phosphoshikimate 1-carboxyvinyltransferase TERM 480 662385 - 662410 + G 75 -11.3 -3.04022 | opp_overlap 662374, overlap 662387 662389 AAGATATCTGTGGCT GATAGTACTGT ACGT GCAGTACTATC TCTGTAATATTTCCT TWT568 662232 - 662417 + | hypothetical protein TWT569 663123 - 662581 - | hypothetical protein TWT570 663475 - 663251 - | hypothetical protein TERM 481 663597 - 663574 - g 79 -3 -5.30348 | overlap 663576 ACTGAAGAAGAAAAA CACCTCAGAC TGCT GTCAGAAGAG CTTTATATTCAGTCA TERM 482 663661 - 663673 + G 70 -9.1 -3.31144 | CAGGTTGCAGCATTG CCTGC CCC GCAGG TTCTGGAGATCGGAA TERM 483 663856 - 663834 - g 72 -9.1 -3.50335 | overlap 663830 TTTTATAAATAGTAA TGCGCTGGA GGTTA TCCCGCGCA TGAATCGCAATATGT TWT571 663511 - 664128 + | O-methyltransferase-like protein TWT572 665032 - 664370 - | hypothetical protein TWT573 665324 - 665037 - | hypothetical protein TWT574 666700 - 665375 - | hypothetical protein TERM 484 665502 - 665473 - GR 77 -9.4 -3.90897 | GAAATATGATAACAA CGCTTTTTCTTC GCGCAA GAAGAACAAGCG CAGGTGACAGTGGAA TERM 485 665882 - 665894 + gr 74 -3.4 -5.055 | ACTAGCTATCAGGAG GGAT ATAAA ATCC TTTTTTGGAAATTCC fdx 666992 - 666666 - | ferredoxin TWT576 667679 - 667035 - | hypothetical protein TWT577 668351 - 667767 - | hypothetical protein TWT578 668430 - 668609 + | hypothetical protein TWT579 669368 - 668577 - | hypothetical protein TERM 486 668899 - 668873 - G 95 -3 -6.02345 | overlap 668881 CAACTAGAAAAAAAA TGCATACAGCCA TGG TAGCCACATACA CTCTGCTCCATTTTC TWT580 669992 - 669423 - | hypothetical protein ribF 671287 - 670349 - | FMN adenylyltransferase ung 672012 - 671320 - | uracil-DNA glycosylase TWT583 672876 - 672019 - | hypothetical protein TWT584 673612 - 672785 - | ABC transporter ATP-binding protein TWT585 674322 - 673771 - | hypothetical protein TERM 487 674193 - 674210 + gr 76 -4.7 -4.82518 | opp_overlap 674188, overlap 674192 674191 TAAAAACAATCAGTG CCGCGAC GAGC GCTGCGG TTTTATTCATATTTT folPXK 676513 - 674213 - | dihydropteroate synthase/dihydroneopterin aldolase/2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase fusion protein TERM 488 675977 - 675957 - GR 70 -4.8 -4.4595 | gap 1 TTAGAAAAGCCAAAA CCAGGATCA AGGA TGATC-TGG TCGCTCTTTACCCCA TERM 489 676277 - 676287 + gr 100 -6.8 -6.44931 | opp_overlap 676276 AAGTTCCCTAACTAC GGGT AAA ACCC TTTTTTTTTCTTCTT folE 677095 - 676550 - | GTP cyclohydrolase I ftsH 679109 - 677109 - | cell division protein FtsH TERM 490 678454 - 678444 - G 70 -2.4 -4.94992 | overlap 678446 GGAAATTGAGAAAAA CGGG ACG CCGG CCTCACCGGCAACTG TERM 491 678809 - 678823 + g 75 -2.9 -5.13137 | CTGGCACTTCATCTG TAAAG CCATC CTTTA TTTTTGCTTTGTTTA hpt 679663 - 679112 - | hypoxanthine-guanine phosphoribosyltransferase TWT590 680867 - 679620 - | cell cycle protein MesJ-like protein TERM 492 680331 - 680299 - GR 79 -12.1 -3.2794 | opp_overlap 680275 680325, overlap 680275 680324 GTTGAGTCACATGAA CACCGCTGTGTAT TGTGGGC ATACACGGCGGTG ACGGAATTACACGCC TERM 493 680616 - 680655 + gr 70 -9.4 -3.40403 | gap 1, opp_overlap 680614, overlap 680617 ATTTAGTGCAAACTG CTCTGCCCGTATT-CTGAC TTC GTCAGCAATGCGTGCAGAA TTCTCCTGCAAACCA TERM 494 680617 - 680654 + gr 81 -12.9 -2.64099 | gap 1, opp_overlap 680614, overlap 680616 TTTAGTGCAAACTGC TCTGCCCGTATT-CTGAC TTC GTCAGCAATGCGTGCAGA ATTCTCCTGCAAACC gcp 683265 - 682060 - | O-sialoglycoprotein endopeptidase TERM 495 682920 - 682910 - G 81 -8.2 -4.44915 | TAATCATCCAGAAAA GCCG ATA CGGC ATGTCCAACAAGATG TWT592 684770 - 683265 - | ribosomal protein acetyltransferase TERM 496 683919 - 683931 + g 70 -2 -5.03314 | TTTTAGAGTATCTGT TTCA CGCAT TGAA TTTTTTGACACTACG TWT593 685633 - 684791 - | holo-[acyl-carrier protein] synthase TERM 497 685525 - 685499 - GR 75 -9.6 -3.59979 | opp_overlap 685504 CTCCTTGAGGGCAAA TCTAACAGAAAG GGC CTTTCTGTTATA AGAATTCGATAGCTC TERM 498 685504 - 685520 + gr 73 -9.5 -3.3344 | opp_overlap 685499 TGAGGGCAAATCTAA CAGAAAG GGC CTTTCTG TTATAAGAATTCGAT TWT594 685983 - 685582 - | hypothetical protein typA 687790 - 685946 - | GTP-binding protein TypA/BipA-like protein TERM 499 686239 - 686225 - GR 76 -2.1 -5.36441 | overlap 686231 TGGGGATACAAAAAA CAAGA CCCTC TCCTG AAGCCCAAGGATTGC TWT596 689003 - 688614 - | hypothetical protein TWT597 690517 - 689321 - | putative serine/threonine-protein kinase TERM 500 691203 - 691189 - g 73 -4.2 -4.86731 | overlap 691191 GGTCCCTAAAGAAAA CCCTTC ATC GAAGCG AAGTGTGGAAGGCTG TWT598 690612 - 691310 + | hypothetical protein TWT599 692000 - 692215 + | hypothetical protein TERM 501 692611 - 692593 - g 76 -8.8 -3.6608 | AGTATGCTACGGAAA GCGACCGC CAA ACAGTCGC CTGGACCTCTTGGGG TWT600 692534 - 694405 + | ABC transporter ATP-binding protein TWT601 694386 - 696155 + | ABC transporter ATP-binding protein TERM 502 697960 - 697989 + T 79 -12.3 -2.79796 | gap 1, opp_overlap 697965 697968, overlap 697963 697967 697968 GTAGGACGGCGCCGG CAACAGCACCAAGG AAA CCTTGG-GTTGTTG TGTGGTGGACTGGGG TERM 503 697968 - 697982 + T 70 -10 -2.94076 | opp_overlap 697968 697965, overlap 697967 697963 697960 GCGCCGGCAACAGCA CCAAGG AAA CCTTGG GTTGTTGTGTGGTGG TWT602 701059 - 698645 - | hypothetical protein TERM 504 698997 - 698986 - G 74 -5.8 -4.67904 | opp_overlap 698986, overlap 698989 CAGCAATTGTAAAAA CAGC AAGA GCTG TTATATACGCAATAT TERM 505 701217 - 701185 - R 72 -10.7 -2.78422 | opp_overlap 701194, overlap 701182 ATATATAGGTAACCA CACACATGACACAGT AAT ACTGTGTTACATGTG GGCTGGTGTCGCCGG TWT603 704289 - 703195 - | hypothetical protein TERM 506 705348 - 705362 + H 70 -10 -3.06361 | overlap 705350 TTACTTTATACTCTC CAGGTG TAA CACCTG TATCTATACTTCCTG TERM 507 705762 - 705795 + H 93 -15.5 -2.91912 | gap 1, opp_overlap 705756, overlap 705760 ATGCATTAATACTTG GC-ACACCTACAGGTG TAA CATCTGTAGGTGTAGC TATATAACTGGATAA TWT604 705866 - 706036 + | hypothetical protein TERM 508 706128 - 706114 - g 72 -2.8 -4.91852 | overlap 706115 CCCAGGAAAAATAAA CCCAAT CTT ATTGGT TGGACCAAAGCGACC ispE 706067 - 707470 + | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase TERM 509 708438 - 708461 + T 83 -10.4 -3.6715 | gap 1, opp_overlap 708441 708443, overlap 708442 GGACGGTGCCTGCAA CAAGACCAAGG AAA CCTTGG-CTTG TTTGGACTTGAGTGC TERM 510 708457 - 708443 - T 73 -10 -3.38812 | opp_overlap 708442 708438, overlap 708441 GTGCCTGCAACAAGA CCAAGG AAA CCTTGG CTTGTTTGGACTTGA glmS 711679 - 709829 - | D-fructose-6-phosphate amidotransferase TERM 511 710287 - 710269 - G 73 -7.4 -4.09353 | overlap 710264 710270 710280 GACCTAAAAACAGAA TTGAGCGA GAA TCGCTCAT CCAATGCGCAAGCTG TERM 512 710286 - 710270 - G 75 -10.9 -3.04527 | overlap 710269 710264 710280 ACCTAAAAACAGAAT TGAGCGA GAA TCGCTCA TCCAATGCGCAAGCT TERM 513 711840 - 711882 + r 100 -18 -2.57795 | opp_overlap 711842, overlap 711836 GGAAACCCTAAAAAA AATTTTTCCGTGCGGTTTCA CAT TAAAACCGCACGGAAAAATC TAAATTCATAATAAA TERM 514 711880 - 711842 - R 100 -22.8 -5.82388 | opp_overlap 711840 711836 AAACCCTAAAAAAAA TTTTTCCGTGCGGTTTCA CAT TAAAACCGCACGGAAAAA TCTAAATTCATAATA TWT607 712457 - 711903 - | hypothetical protein TWT608 714100 - 713057 - | hypothetical protein miaA 715167 - 714262 - | tRNA isopentenylpyrophosphate transferase TWT610 716655 - 715243 - | hypothetical protein recA 718013 - 716670 - | recombinase A TERM 515 717417 - 717437 + g 82 -11.1 -3.53279 | overlap 717411 717414 AAATATAGCGGTCGT TCCGGTCTG ATT CAGCCCGGA TGTTATCTTTCTCAG pgsA 718783 - 718178 - | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase TWT613 719253 - 718906 - | hypothetical protein ftsK 721536 - 719311 - | cell division protein FtsK TERM 516 720320 - 720308 - G 70 -9.1 -3.30771 | CTAGATTTCCCAGAA CCGGT CGC ACCGG CAACAAGTAGGTGTG TERM 517 720537 - 720547 + g 79 -4 -5.24129 | overlap 720524 720522 TGTCTGATGCAACAG CATA GGA TATG TTTTTTGTAAGGGCA TERM 518 721143 - 721131 - G 72 -5.5 -4.52589 | CCGCGGTAGATAAAA TCCGG ATT CCAGA AGATGGATAAGGAAA TWT615 723170 - 721533 - | hypothetical protein TERM 519 723123 - 723107 - G 76 -5.1 -4.74103 | overlap 723086 CGTCTAATTCAAAAA CAGTCAT ATT ACGACCG ACTTCACCTAGTCCA thyX 724035 - 723301 - | FAD-dependent thymidylate synthase TERM 520 724070 - 724043 - R 100 -17 -5.47159 | TGCAACAAACAAAAA CCGGGCTACGAG AAAC CCCGCAGCCCGG TCGAAAAATACAGGA TWT617 725434 - 724088 - | hypothetical protein TERM 521 725421 - 725434 + g 78 -5.3 -5.08878 | AAGCCTATATGTTTA GTGTA TATA TACAC TTTTATTTATATATT TERM 522 725854 - 725877 + G 70 -9.6 -3.00298 | opp_overlap 725852 725854 CGCTGGGATATAATA CTTGCGCTGG GATA TCAGTGCAAG TGTGTCATTGCAGCA wblE 725836 - 726225 + | putative transcription regulatory protein TWT619 726428 - 726240 - | hypothetical protein TERM 523 726594 - 726606 + H 71 -7.7 -4.01101 | ATAGTAAACATACCT GGCTA AAC TAGCC TTATTCTTGGCTTTG TERM 524 726738 - 726768 + H 71 -10.5 -2.61695 | overlap 726750 TCCCCCCTTCCGCAC ACCGTATGCATGC AGGCC GTATGCATACGGC CTGTTTACGCGTGAA TERM 525 726750 - 726771 + H 95 -14.5 -3.57462 | overlap 726738 CACACCGTATGCATG CAGGCCGTA TGCA TACGGCCTG TTTACGCGTGAAATA TERM 526 728080 - 728054 - g 78 -5.2 -5.06414 | overlap 728057 GCGTGGCAAGAAAAA TAAGTCCTCT TCAGAAG AGAGGACATA AGCCGAAGCGCCTTG TWT620 727407 - 728081 + | hypothetical protein TERM 527 728077 - 728057 - T 80 -6.9 -4.63592 | overlap 728054 TGGCAAGAAAAATAA GTCCTCT TCAGAAG AGAGGAC ATAAGCCGAAGCGCC TWT621 728616 - 728035 - | hypothetical protein rph 729412 - 728642 - | ribonuclease PH TERM 528 728890 - 728918 + g 84 -8.3 -4.56597 | overlap 728896 CGGATACAGAATCAG TCAGAGGATGCTT TGA AAGTATCTTTTGA TTTTTAGCCCAGACA TERM 529 728896 - 728912 + g 78 -5.9 -4.77757 | overlap 728890 CAGAATCAGTCAGAG GATGCTT TGA AAGTATC TTTTGATTTTTAGCC TERM 530 729221 - 729209 - G 72 -4.7 -4.56597 | overlap 729210 729211 CTGTCCGCGTAAAAA CGGCG GAA CTCCG CGCTGAAAGGTTGCA TERM 531 729941 - 729919 - g 86 -11.2 -3.76969 | opp_overlap 729927 729938, overlap 729915 729922 AGAAGAACAAATGAA CAGGCCGCTG TAG CAGCGGCGCG GGCTGCGTACATTGC TERM 532 729938 - 729922 - g 83 -13.7 -2.65056 | opp_overlap 729927, overlap 729919 729915 AGAACAAATGAACAG GCCGCTG TAG CAGCGGC GCGGGCTGCGTACAT TWT623 729436 - 730764 + | nicotinate phosphoribosyltransferase TWT624 732978 - 730909 - | hypothetical protein TWT625 734386 - 733124 - | putative serine protease TWT626 736205 - 734637 - | hypothetical protein TERM 533 736064 - 736054 - GR 79 -8.2 -4.29845 | TAATCGAATTCAAAA GGCG CGG CGCC AGACGGGGCACCAAC TWT627 737514 - 736048 - | hypothetical protein TERM 534 736889 - 736875 - GR 75 -2.8 -5.1244 | overlap 736877 CGAGTAATACAAAAA TCCCTG CGG CAAGAA CAGCGTACTGAACTC TWT628 738624 - 737548 - | hypothetical protein TWT629 740030 - 738672 - | mycothione/glutathione reductase TERM 535 738796 - 738778 - G 72 -8.9 -3.60792 | CCCTGAACCTTCAAA TTCAGGC TAACC GCCTGAA TAAGCGGCTGGATAA TERM 536 739025 - 738977 - G 86 -13.2 -3.37533 | gap 1, overlap 738981 TTGGAAAAGTACCAA CCCATGCCACCTGCGGTTCGCTG AAAA CAGC-AGCAGCAGGTGGCACAAG ATCAGATGCCAACAT TERM 537 739021 - 738981 - G 86 -14.8 -2.59883 | gap 1, overlap 738977 AAAAGTACCAACCCA TGCCACCTGCGGTTCGCTG AAAA CAGC-AGCAGCAGGTGGCA CAAGATCAGATGCCA TERM 538 739303 - 739328 + g 77 -3.3 -5.16237 | opp_overlap 739307 AGACGCGTGCCCGAT GAAAGTTCTAT CTCA ACAGAACTATC TTTTTTGCTAACATT pca 743430 - 740035 - | pyruvate carboxylase TERM 539 741711 - 741683 - G 76 -2.3 -5.36441 | overlap 741687 741689 TCTTCATACAAAAAA CGAAGAGCTACAT CAT ATGTAGCACCACC CCAGACCTCCATAGA TERM 540 741707 - 741687 - G 76 -8.3 -4.01646 | overlap 741683 741689 CATACAAAAAACGAA GAGCTACAT CAT ATGTAGCAC CACCCCAGACCTCCA TERM 541 741705 - 741689 - G 75 -9.5 -3.56985 | overlap 741687 741683 TACAAAAAACGAAGA GCTACAT CAT ATGTAGC ACCACCCCAGACCTC TERM 542 743714 - 743682 - g 83 -9.9 -4.14739 | GGACGTACTCGAAAA GCCGCGCAAAGTG ACAGATG CAATTTGCGCGAC ATCCTGGGCCGGAGC parA2 743494 - 744267 + | putative plasmid partitioning protein TWT632 746818 - 745304 - | two-component system sensor histidine kinase TERM 543 746580 - 746601 + g 74 -5.8 -4.56775 | overlap 746574 746573 GCTTTCTTCAGGGCA CCTGCCCA TGTCTC TGGACAGG TTTTTCCGACGAAAT gabT 748709 - 747411 - | 4-aminobutyrate aminotransferase TERM 544 748379 - 748389 + g 80 -6.8 -4.58663 | opp_overlap 748378 748379 TCTTTTTTGGGAAAT CACC CGG GGTG TTTTTAGCAAGTAAT folD 749597 - 748710 - | methenyltetrahydrofolate cyclohydrolase glyA 751056 - 749770 - | serine hydroxymethyltransferase TWT636 751692 - 751129 - | putative methyltransferase TERM 545 751454 - 751464 + g 71 -6.8 -4.18161 | GCGTTTTTCTTGCAA GCCT TGA AGGC TTTTGCGGATTTGTC TERM 546 752042 - 752081 + r 100 -15.2 -3.16881 | gap 1, overlap 752031 752043 AGGTTGTGTGGGTGA C-GGGTAACCTGTAACTCG CCA TGCGTTACAGGTTACCCTG TTACTACAGTCCATG TERM 547 752043 - 752079 + r 100 -18.9 -3.14602 | overlap 752031 752042 GGTTGTGTGGGTGAC GGGTAACCTGTAACTCG CCA TGCGTTACAGGTTACCC TGTTACTACAGTCCA gcvH 752686 - 752321 - | glycine cleavage system H protein gcvT 753812 - 752742 - | aminomethyltransferase TERM 548 753123 - 753156 + g 74 -10.9 -2.87931 | TATTCGAAGGGTATT GCGAGCAGCGAGTCC GCAA GGAGTCGCACCTCGC TCTATGAGGGCTCGC TERM 549 753760 - 753770 + g 76 -8.2 -4.03093 | opp_overlap 753759 AAACAGGTGAAAATC GCGC CAA GCGC TTTATGCTCGTTATC TERM 550 753824 - 753797 - G 84 -14.2 -2.92157 | opp_overlap 753789, overlap 753788 TATCAAGCGGAGATA CCCTAGTCATGG CCAT CCTTGACTAGGG TACTACATGTCTGTT TERM 551 754111 - 754099 - RH 73 -7.7 -4.06892 | AGAATTTCACACAAA TCACG CGG CGTGA CGGAACTCAACAACA TWT639 755133 - 754099 - | translation-associated GTPase rmuC 755084 - 756532 + | DNA recombination protein RmuC-like protein TWT641 757074 - 756604 - | hypothetical protein TERM 552 756682 - 756669 - G 74 -5.9 -4.56887 | CAAAAATTGACAAAA GCCCC AGAA GAGGC ACCCAAAAACTGCTC ispH 758039 - 757071 - | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase TERM 553 758540 - 758552 + G 77 -9.1 -3.87815 | CTTCGTGTGCAACTT GCCCT TGA AGGGC TTTATGAGCATAAAA xseA 758153 - 759367 + | exodeoxyribonuclease VII large subunit xseB 759416 - 759781 + | exodeoxyribonuclease VII small subunit TWT645 761135 - 759816 - | major facilitator superfamily D-galactonate transporter kdgK 762387 - 761443 - | 2-keto-3-deoxygluconate kinase araD 763051 - 762380 - | L-ribulose-5-phosphate 4-epimerase sgaU 763899 - 763045 - | L-xylulose 5-phosphate 3-epimerase ulaD 764605 - 763925 - | 3-keto-L-gulonate-6-phosphate decarboxylase TERM 554 763971 - 763959 - G 73 -7.7 -4.07687 | ATCTCTTTTTGAAAA CTGCT TGC AGCAG AAGACGGACAGTCTG php 765597 - 764605 - | phosphotriesterase-like protein pth 766521 - 765961 - | peptidyl-tRNA hydrolase TWT652 766605 - 766814 + | hypothetical protein TWT653 768115 - 767537 - | hypothetical protein rplY 768775 - 768215 - | 50S ribosomal protein L25/general stress protein Ctc TERM 555 768910 - 768891 - R 71 -7 -4.05389 | TATATACATCAGAAA CCCTGCCC AAGG GGGCGGAG ACTGCTAGGGCAAAT gpm 769580 - 768915 - | phosphoglycerate mutase TWT656 770660 - 769626 - | hypothetical protein TWT657 770968 - 770723 - | hypothetical protein TWT658 771474 - 770920 - | hypothetical protein TWT659 771548 - 772558 + | acetyltransferase TERM 556 772729 - 772746 + G 75 -9.9 -3.53012 | opp_overlap 772722, overlap 772723 ACCATAAGTCGTCGC GGATACG GCGG CGTATCC TTTCCAAAAGGAAAG TWT660 772606 - 773505 + | hypothetical protein TERM 557 773504 - 773485 - f 77 -10.8 -3.31263 | ATCGCACCGGGAGAA TACAGGGT TGTA ACCCTGTA GGGTCAGAGTGGGCC mscL 773866 - 774489 + | large-conductance mechanosensitive channel TWT662 774675 - 775721 + | iron ABC transporter substrate-binding protein TWT663 775743 - 776573 + | iron ABC transporter ATP-binding protein TWT664 776654 - 777508 + | iron ABC transporter permease protein TWT665 778446 - 779894 + | hypothetical protein TWT666 780844 - 780059 - | hypothetical protein TERM 558 780315 - 780326 + g 71 -7.2 -4.08945 | opp_overlap 780297 TTTGGCAGCTTAGAT GGCC GCCA GGCC TTTTGGAAAGATGGT TERM 559 780390 - 780402 + g 70 -9.1 -3.47349 | CGTTCCGGCTTCTGT TGCGC AGA GCGCA TTCTGGCTTTCGCGG TWT667 780907 - 781518 + | hypothetical protein TWT668 781720 - 781478 - | hypothetical protein TERM 560 781732 - 781722 - RH 72 -8.2 -3.83205 | opp_overlap 781720 781722 ACCGGCGATATCAAA CGCC AAG GGCG TGTTTTATGCGCCCA TERM 561 781722 - 781732 + rH 72 -8.2 -3.79419 | opp_overlap 781722, overlap 781720 ACCGGCGATATCAAA CGCC AAG GGCG TGTTTTATGCGCCCA TWT669 785235 - 781717 - | hypothetical protein TERM 562 785377 - 785357 - gH 93 -9.9 -4.56358 | opp_overlap 785357 TATACCTATACAAAA TGTACATTT ATA AAATGTACA TTTGCAATGGCGCAC TERM 563 785357 - 785377 + GH 75 -9.9 -3.59979 | opp_overlap 785357 TATACCTATACAAAA TGTACATTT ATA AAATGTACA TTTGCAATGGCGCAC TWT670 785230 - 785448 + | hypothetical protein TERM 564 785695 - 785726 + G 76 -4.2 -4.92756 | opp_overlap 785680, overlap 785687 785697 CCGGCAATCGCTGTT GCGGCGGCTGGTGC AGTT GCGCCGGTTGCGAC TTTCTTTTTGGTGCT TERM 565 787327 - 787313 - g 82 -11.4 -3.52481 | opp_overlap 787313 787312 787310 787308 787306 AAATACGCGATATAA CCGGTG TTA CACCGG ATGTGTATTTCCATT TERM 566 787313 - 787327 + G 73 -11.4 -2.51937 | opp_overlap 787313, overlap 787312 787310 787308 787306 AAATACGCGATATAA CCGGTG TTA CACCGG ATGTGTATTTCCATT TWT671 785461 - 787479 + | hypothetical protein TWT672 787790 - 787536 - | hypothetical protein TWT673 787820 - 787984 + | hypothetical protein TWT674 787989 - 788429 + | hypothetical protein fusA 790803 - 788698 - | elongation factor G TERM 567 789845 - 789829 - G 70 -2.1 -5.07107 | overlap 789830 789833 CAAACGGCCAAAAAA TGGATGC ACG GCAACCT TGAACGCCAGTGCAG TERM 568 789884 - 789865 - G 79 -7.8 -4.4009 | CGCCAGTGCAGAAAA TGGCTGAC TTAC GTCTGCCA AGCGCTCTTGCGGGT rpsG 791309 - 790839 - | 30S ribosomal protein S7 TERM 569 791187 - 791201 + g 91 -8.6 -5.00616 | opp_overlap 791187 791186 CGCCGAATAAACAAT TCTCTG CGC CAGAGA TTTTTTGCCAGAAAG rpsL 791683 - 791309 - | 30S ribosomal protein S12 TWT678 791861 - 791631 - | hypothetical protein TWT679 792357 - 792722 + | hypothetical protein greA 792682 - 793200 + | transcription elongation factor ilvA 794592 - 793309 - | threonine deaminase TERM 570 794482 - 794472 - G 84 -8.2 -4.70515 | CACACTTAAAATAAA CGGG AGA CCCG ACAAGGTCTGACAGC nrdF 795586 - 794603 - | ribonucleotide-diphosphate reductase subunit beta nrdA 798060 - 795682 - | ribonucleotide-diphosphate reductase subunit alpha TERM 571 797400 - 797387 - G 70 -5.3 -4.4648 | ATTTCCATGACAAAA CAGTT TGAC AACTG AGGTGTGCAGGTACC TERM 572 797486 - 797499 + g 74 -8.1 -3.85698 | overlap 797492 TAGAACTTTAAGGCT GACCC TGTG GGGTC TTTCTCGAGCACAGA TERM 573 798106 - 798151 + H 79 -8.7 -4.25104 | opp_overlap 798105 798108 798133, overlap 798108 AAGCGGAATAGATAC TACTATATATCGTGTTT AAATAGCAAACA AAACACGATATATAGTG TTTTACTGCGCAAAA TERM 574 798108 - 798149 + H 76 -9.1 -3.73042 | opp_overlap 798105 798108 798133, overlap 798106 GCGGAATAGATACTA CTATATATCGTGTTT AAATAGCAAACA AAACACGATATATAG TGTTTTACTGCGCAA TWT684 798174 - 799400 + | putative efflux protein TWT685 799585 - 800430 + | putative exodeoxyribonuclease trpS 800420 - 801427 + | tryptophanyl-tRNA synthetase ribG 801399 - 802514 + | 5-amino-6-(5-phosphoribosylamino)uracil reductase ribC 802518 - 803231 + | riboflavin synthase subunit alpha TWT689 803258 - 803905 + | dipeptide ABC transporter substrate-binding-like protein TERM 575 803980 - 803968 - g 71 -3.3 -4.76802 | CGCAAAAACAAGAAA CTGCT CGC AGCTG CAGATTTGAGGTTGA TWT690 803922 - 804557 + | dipeptide ABC transporter substrate-binding-like protein ribH 804581 - 805051 + | riboflavin synthase beta chain pncA 805753 - 805124 - | nicotinamidase TERM 576 805230 - 805244 + g 85 -6.4 -5.26316 | opp_overlap 805230 AAATCAAGCAGAACA CGGGTT ATA AATCCG TTTTTTATGGAGTCA TWT693 807619 - 806081 - | peptidase TWT694 808995 - 807760 - | putative DNA polymerase III delta' subunit TERM 577 808930 - 808960 + g 86 -13.3 -3.3062 | overlap 808925 TGACGCTACGCTAGG CTCCTGCACTGCG CGCAT CGCACTGCGGGAG TTGCTAGTATTTGCA tmk 809759 - 809160 - | thymidylate kinase topA 812344 - 809819 - | DNA topoisomerase I TERM 578 810801 - 810777 - G 86 -13.7 -3.27667 | opp_overlap 810778, overlap 810772 GAGAAAGCAAGCCAA TCAGGAACAAG CAT CCTGTTCCTGA GATGAGCATAGCCGC TWT697 812815 - 812405 - | hypothetical protein TERM 579 812729 - 812772 + g 100 -25 -4.59773 | opp_overlap 812742 812753, overlap 812731 TGACCCAGAGCCACC TTCCCCTTTTAAAGAGGGAA ATAT TTCCCTCTTTAAAAGGGGGA TTTTTACAACTCGCG TERM 580 812731 - 812770 + g 100 -25.4 -2.61004 | opp_overlap 812742 812753, overlap 812729 ACCCAGAGCCACCTT CCCCTTTTAAAGAGGGAA ATAT TTCCCTCTTTAAAAGGGG GATTTTTACAACTCG TERM 581 812759 - 812742 - G 75 -9.9 -3.53012 | opp_overlap 812731 812729, overlap 812753 CCTTCCCCTTTTAAA GAGGGAA ATAT TTCCCTC TTTAAAAGGGGGATT TWT698 813195 - 812812 - | hypothetical protein TWT699 813376 - 813170 - | hypothetical protein TWT700 814336 - 813404 - | hypothetical protein TERM 582 814297 - 814309 + g 74 -3.3 -4.94487 | TTATGGATGCAATCT CTTCC AGG GGCAG TTTTCTGTTTTCTAA TWT701 815382 - 814321 - | putative type II/type IV pathway secretion protein TWT702 815900 - 815442 - | translation regulator TERM 583 815651 - 815663 + g 79 -7.7 -4.37886 | ATATCAAGTCGAGAT CACCT ATT AGGTG TTTTATCGCAGATAG TERM 584 815779 - 815762 - G 73 -7.7 -4.07568 | opp_overlap 815762 815762, overlap 815763 815775 CTTCTTGCTGTAAAA CCCCGTT CACA AACGGGA GTTGTCCAGAGGTGA TWT703 816234 - 816079 - | hypothetical protein TWT704 816491 - 816228 - | hypothetical protein TERM 585 817357 - 817325 - gH 88 -3.4 -5.81032 | gap 1, overlap 817327 TAATGGCAAAAAAAA TGGTTATCGGCAAGC AAAG GCTCGCCGAG-ACTA CGTCTTAAAAAGGAT ponA 816480 - 819110 + | penicillin-binding protein 1 TWT706 819214 - 820098 + | hypothetical protein asd 821467 - 820454 - | aspartate-semialdehyde dehydrogenase ask 822720 - 821464 - | aspartate kinase TERM 586 821586 - 821573 - G 76 -5.3 -4.77165 | GCCCTTACAACAAAA GAGAT TCGC ATCTC ACTGGTAGATATCAT recR 823512 - 822916 - | recombination protein dnaZX 825089 - 823521 - | DNA polymerase III subunits gamma and tau TERM 587 824925 - 824915 - G 74 -5.4 -4.58395 | opp_overlap 824919 GGCATCGTGCAAAAA CTCT GGC AGAG GTAGTCTTCCCGCAG TERM 588 825208 - 825196 - R 86 -4.7 -5.49809 | overlap 825185 GAAAGCGTAAAAAAA CGCCG AAA CCGCG ATGAGAAAACAAAGG rplL 825718 - 825323 - | 50S ribosomal protein L7/L12 TERM 589 825571 - 825600 + g 71 -10 -3.17194 | gap 1, opp_overlap 825567 CAGGCTCAACAGGCG CAGCAGCTGCAGC AACAG GC-GCAGCAGCTG TTACCTTAAAAACCT rplJ 826215 - 825715 - | 50S ribosomal protein L10 TERM 590 826324 - 826304 - R 84 -5.3 -5.42198 | opp_overlap 826308, overlap 826306 TTCTAAAAAACAAAA CCTACGGTC ATA GGCCGTATG ATCCTAGCACTCACA rplA 827033 - 826350 - | 50S ribosomal protein L1 rplK 827455 - 827030 - | 50S ribosomal protein L11 nusG 828145 - 827492 - | transcription antitermination protein TWT716 828365 - 828123 - | hypothetical protein aspC 828512 - 829726 + | aspartate aminotransferase murB 830784 - 829729 - | UDP-N-acetylmuramate dehydrogenase TERM 591 830822 - 830802 - R 88 -12.6 -3.56562 | AAATTCACGAGACAA GCTGCCAG GATTA CTGGCAGC TATCGCACTGCAAAA TWT719 830994 - 830812 - | hypothetical protein TWT720 831512 - 831069 - | hypothetical protein TWT721 832080 - 831658 - | hypothetical protein TERM 592 832056 - 832068 + g 71 -7.7 -3.91897 | CTGTGACATGCCGCG GTGGA AAT TCCAC TTTCTGAGTCAAAGC TWT722 832322 - 832447 + | hypothetical protein purF 833969 - 832455 - | amidophosphoribosyltransferase TERM 593 832652 - 832683 + g 73 -9.6 -3.33696 | gap 1, overlap 832654 CTTGTAGTTGCCGGT TGTGCGCAACAAGCT CAG AGCTTGTTG-GCATG TTGATTCCAAAAACA TERM 594 832654 - 832681 + g 81 -12.2 -3.23853 | gap 1, overlap 832652 TGTAGTTGCCGGTTG TGCGCAACAAGCT CAG AGCTTGTTG-GCA TGTTGATTCCAAAAA purM 835039 - 834026 - | phosphoribosylaminoimidazole synthetase TERM 595 835252 - 835262 + H 80 -6.8 -4.56597 | AATCCTTTCCCTTGA CACC ATC GGTG TTTTTACAACAGACA TERM 596 836230 - 836243 + G 95 -2.3 -6.02914 | opp_overlap 836229, overlap 836228 836231 GGAATATGTAAAAGG CCGAG AGGT CTCGC TTTTTTTTCTATGCG TERM 597 836432 - 836462 + G 73 -10.4 -3.09785 | GTAATAAAACAGATG GCCGCTTGCGGAAT AGT ATTTCGCGGGCTGC TCTATTGCGGTCTGG TERM 598 836869 - 836857 - g 80 -6.2 -4.77629 | AAAAGCAAGAGAAAA GGCC TATAG GGCC GTTGACCAGATTTCT purD 835697 - 836956 + | phosphoribosylamine--glycine ligase TERM 599 837263 - 837242 - g 82 -2.9 -5.52384 | TTCTTAGCAAAAAAA TCGCTGGCT CAGA AGATAGCGA TAGGCCTGAACTTAT serS 837067 - 838320 + | seryl-tRNA synthetase TWT727 838343 - 839134 + | hypothetical protein TERM 600 839356 - 839370 + G 73 -4.2 -4.7657 | opp_overlap 839353, overlap 839361 TGTCAAAAAAGCCCA GCCTTC CCG GAAAGC TTTTTCGGGTTTTTA TERM 601 839361 - 839379 + G 100 -9.6 -5.14894 | opp_overlap 839353, overlap 839356 AAAAAGCCCAGCCTT CCCGGAAA GCT TTTTCGGG TTTTTATAGTTTTTT TWT728 839340 - 840503 + | transcriptional regulator hemL 842078 - 840678 - | glutamate-1-semialdehyde 2,1-aminomutase TERM 602 840717 - 840753 + g 82 -11.4 -3.56594 | overlap 840707 840718 CTTCGGGCGCGCGGG GGCGCTGCCTGCAGCC CTGAC GGCATCGGGCAGCGCG TTTACGACCCTTTCA TERM 603 840718 - 840752 + g 86 -14.9 -2.73635 | overlap 840717 840707 TTCGGGCGCGCGGGG GCGCTGCCTGCAGCC CTGAC GGCATCGGGCAGCGC GTTTACGACCCTTTC TERM 604 841424 - 841414 - G 79 -8.2 -4.26344 | ACACGTGCATTAAAA CCCG GAT CGGG CGGAATAACTCCCAT TERM 605 841995 - 841978 - G 88 -7.7 -5.00616 | gap 1 GCCTTGGCTAAAAAA CGT-GGCG TCC CGCCGACG GCAGCATATGCCCTA hemB 843062 - 842082 - | delta-aminolevulinic acid dehydratase TWT731 843789 - 843064 - | uroporphyrinogen-III synthase-like protein TERM 606 843472 - 843434 - G 100 -15.4 -4.07568 | GTTCTGCGCGGAAAA TTCAGATGGGCCTGTATG GCG CTTGCAAGCCCATCTGAA CTAAAATCATTTTCG hemC 844751 - 843786 - | porphobilinogen deaminase TERM 607 843986 - 843968 - G 81 -8.2 -4.53303 | TACTTTCACAGAAAA TTTTCCCG TCG CGAGAAAA AACCTTTGCATGTAA TERM 608 844009 - 843989 - G 73 -2.5 -5.24129 | opp_overlap 843989 CGTCGCGAGAAAAAA CCTTTGCAT GTA ATCCTAAGG ATTTATCATTTGCCG TERM 609 844139 - 844149 + g 76 -8.2 -4.12188 | CAAGCCGGTAGGTCA CCGC GAC GCGG TTTTGCGGGTCGTCC hemH 845937 - 844762 - | ferrochelatase TWT734 846581 - 845934 - | hypothetical protein hemE 847869 - 846712 - | uroporphyrinogen decarboxylase TERM 610 847749 - 847727 - G 75 -9.8 -3.56844 | overlap 847725 847736 CGCATGAACCAAACA GGCAAACACC CCG GGCGTGTGCC CCTGAATGCCTCCAT TERM 611 847817 - 847787 - G 86 -11.2 -3.68738 | overlap 847783 GTGTTAACAAACGAA CCTGCAGACCGA CCGGCAC TCGGCCTGCAAG ACAAGCTGTGTAAGG hemA 847889 - 849232 + | glutamyl-tRNA reductase TERM 612 850036 - 850054 + GF 73 -7.4 -4.19238 | overlap 850037 CTTCGCGAAACCCTA TCAGCGTG TGA CATGCTGG TTTTGAAGTTACAAC TERM 613 850306 - 850294 - gf 70 -4.8 -4.41348 | overlap 850304 CTTTTGCCAAACAAA GGGT ACATA ACCC CAAGAAAGATTGAGG menC 849181 - 850431 + | O-succinylbenzoate synthase TERM 614 850501 - 850479 - g 73 -7.6 -4.053 | opp_overlap 850478 850488 ACCATGTGACATAAA TGCCGAGCGG GCA CTGCTTGGCA GTGTCTTACTCAGTA TERM 615 850488 - 850506 + G 77 -11 -3.18264 | opp_overlap 850479, overlap 850478 CATAAATGCCGAGCG GGCACTGC TTG GCAGTGTC TTACTCAGTAAAGAC TERM 616 851040 - 851028 - g 79 -9.1 -4.16016 | TGATTCGCTAACAAA CGGGT TGC ACCCG GGGCAAATGGTAATC dnaC 850444 - 851769 + | replicative DNA helicase TWT739 851787 - 852005 + | hypothetical protein TWT740 852044 - 852649 + | hypothetical protein TWT741 852685 - 852894 + | hypothetical protein TWT742 852952 - 853737 + | sugar phosphatase pyrE 854378 - 853734 - | orotate phosphoribosyltransferase TWT744 854399 - 855208 + | exodeoxyribonuclease III TWT745 855983 - 855189 - | hypothetical protein TERM 617 855440 - 855416 - G 88 -12.8 -3.56216 | opp_overlap 855423, overlap 855407 AACTAATCCACAGAA GCCCTGTCGC GCTAA GCGCCAGGGC CCTTAGCGACCTGTA TERM 618 855490 - 855478 - G 73 -7.7 -4.11773 | AAATATCCCCGAAAA TACGC AAC GCGTA GACCAAGCCACAAGT TERM 619 855637 - 855624 - G 70 -2.3 -5.0133 | CAGGGGGCCAAAAAA GGCGA ATAA TAGCC AGAAAGAAAAAGATA TERM 620 855914 - 855901 - G 80 -5.9 -5.02074 | overlap 855902 855903 GTATTTCTGAAAAAA CGCCC GCGA GGGCA GAACAAACGCAATGC clpB 858091 - 855974 - | ATP-dependent protase ATP-binding subunit hspR 858458 - 858066 - | heat shock regulator cbpA 859348 - 858467 - | curved DNA-binding protein TERM 621 858625 - 858586 - GR 100 -28.2 -3.28712 | opp_overlap 858595 858612, overlap 858595 TTTTCGGTGGCACAA TCTGCACAACAGCCAGGA GATC TCCTGGCTGTTGTGCAGA TTGAACACCACGGCC TERM 622 858595 - 858616 + gr 93 -14.5 -3.33261 | opp_overlap 858586 858595, overlap 858612 GCACAATCTGCACAA CAGCCAGGA GATC TCCTGGCTG TTGTGCAGATTGAAC TERM 623 858616 - 858595 - GR 93 -14.5 -3.34233 | opp_overlap 858595 858612, overlap 858586 GCACAATCTGCACAA CAGCCAGGA GATC TCCTGGCTG TTGTGCAGATTGAAC grpE 859892 - 859323 - | HSP-70 cofactor GrpE dnaK 861728 - 859917 - | molecular chaperone DnaK TERM 624 861759 - 861747 - H 72 -4.9 -4.56597 | opp_overlap 861754 TCTCCTTGCTAAAAA TTTGT TTC ACAAA ACCTGTGTATACTCC TERM 625 862047 - 862023 - g 78 -6.4 -4.67552 | opp_overlap 862024 CCGACGAAAAAATAA TGCGCAAGGC CCTCT GTCTTGCACA TGCCGCTGGTGAAAA TWT751 861941 - 862453 + | hypothetical protein proC 862567 - 863457 + | pyrroline-5-carboxylate reductase TWT753 863673 - 864176 + | putative redoxin aspS 865537 - 864197 - | aspartyl-tRNA synthetase TWT755 865567 - 866175 + | phosphoglycerate mutase cycY 866159 - 866845 + | thiol:disulfide interchange protein TERM 626 867415 - 867403 - g 74 -5.5 -4.64334 | opp_overlap 867406, overlap 867404 AAGTTCTTAATAAAA CCTGC CGT GCAGA GAACGAATCCCTTTC ccsA 867070 - 867756 + | cytochrome c-type biogenesis protein TERM 627 868245 - 868232 - g 70 -2.3 -5.03747 | opp_overlap 868235, overlap 868233 AAAGTTTTGAAAAAA TCCCT GCAC AGGGT GTCAGTGTATGGCAA TERM 628 868637 - 868621 - g 73 -8 -4.02742 | GATAATAAGAGTAAA CGATCC CTTGC GGATCG GTAGTGAAAATATTT TERM 629 868797 - 868779 - g 71 -3.8 -4.82901 | overlap 868781 TCGGGGTGATAAAAA TACACCAG GGG CTAGCGCA GCAGCTCGGTATGAT TWT758 867743 - 869368 + | hypothetical protein ccsB 869375 - 870325 + | cytochrome c-type biogenesis protein TWT760 871768 - 870320 - | hypothetical protein TWT761 873020 - 872706 - | hypothetical protein TERM 630 873206 - 873220 + H 70 -10 -2.99569 | opp_overlap 873206, overlap 873205 873198 TAAACTGCAACAGCA CCAAGG AGA CCTTGG CTTGTTGTGTTGTGG TWT762 873396 - 873674 + | hypothetical protein TERM 631 874626 - 874577 - g 73 -4.2 -4.89477 | opp_overlap 874576, overlap 874578 874580 GGGTGAAGAACAAAA TTATTTCTGCGAAGTGCACGGG TGCCAG CTCGAGCACTTCACCGAAAAGA ACTATTTCTTTAGGT TERM 632 874623 - 874580 - g 77 -10.3 -3.32865 | opp_overlap 874576, overlap 874578 874577 TGAAGAACAAAATTA TTTCTGCGAAGTGCACGGG TGCCAG CTCGAGCACTTCACCGAAA AGAACTATTTCTTTA metS 874080 - 875831 + | methionyl-tRNA synthetase TWT764 882786 - 876343 - | hypothetical protein TERM 633 878267 - 878306 + g 75 -10.9 -3.07994 | gap 1, opp_overlap 878263 878301 AACGAGACAGATGCA CCCTGCTTTGTCACAACA AGCTG TGTTGGGG-AAAGCAGGG TTGCCTGCCCTTCAA TERM 634 880615 - 880626 + g 73 -4.4 -4.73613 | TGCACGAGCCTTATC CTTG AGAG CAAG TTTTGTTACTACTAC TWT765 883675 - 882872 - | glycosyltransferase TWT766 884219 - 883908 - | hypothetical protein TWT767 884659 - 884216 - | hypothetical protein TERM 635 884437 - 884410 - G 72 -2.7 -4.95167 | gap 1, overlap 884411 GAATCAACAACAAAA CTGC-GACGGCA AGAAA TGCCGCCCACAA AGGCAAGGCGAGCGA TERM 636 884475 - 884464 - G 70 -2.2 -4.95547 | GCGATAACAACAAAA CTGC GACG GCAA GAAATGCCTGAAGTG TWT768 885064 - 884672 - | hypothetical protein TWT769 887224 - 885158 - | metalloendopeptidase TWT770 887213 - 888055 + | HAD family phosphatase TERM 637 888150 - 888166 + FH 80 -12.3 -3.05463 | TAGTGGCCTATGGCG CGCGCTT GGA AAGCGCG TTGGGTGCAAGCCCT TERM 638 888564 - 888550 - g 77 -7.2 -4.48877 | GAAACAGGTACAAAA TACTCT CGG AGAGTA GGACCGAATATGCAG TWT771 888333 - 889214 + | DNA modification methyltransferase TWT772 889363 - 890160 + | hypothetical protein TWT773 890169 - 890372 + | hypothetical protein TERM 639 890542 - 890520 - g 83 -9.2 -4.29829 | ATAAGCAGTAAGAAA TTTTCCCCAA GCG TTGGGGCAAA AATGGTGACTGTCAA TWT774 890376 - 890825 + | hypothetical protein ftsW 890988 - 892334 + | cell division protein FtsW TERM 640 892823 - 892802 - g 71 -7.3 -4.09739 | overlap 892811 TGAAGGTGCTGAAAA CGGAAGAAG CGTT CTTCTTACG ATAAACGAAAAGTTG pbpA 892377 - 893834 + | penicillin-binding protein TERM 641 894674 - 894656 - g 74 -11 -2.84325 | opp_overlap 894654, overlap 894653 894651 GTTGTTGAAAGATGA CCTTGCAG AGG CCGCAAGG GCTTATCCGCCACTC pknA 893838 - 895595 + | serine/threonine-protein kinase TERM 642 896736 - 896721 - g 72 -5.4 -4.38114 | overlap 896727 AAAATTCAGAATAAA CACAGA GCAT TCTGCG ACAATGCCAGTCGGC TWT778 895600 - 897252 + | serine/threonine protein kinase TWT779 897330 - 897590 + | hypothetical protein ndh 898991 - 897663 - | NADH dehydrogenase TERM 643 898949 - 898934 - G 71 -6.8 -4.07568 | GTTTTTTTCTCAAAA TCCGGG CAAT CCCGAA GCCCGCAAAACCGCC TERM 644 899089 - 899059 - R 90 -13.4 -3.64466 | ATCGCACACACACAA GCGTTACTGTACCT AAC AGTCACAGTAACGC AACGACCAGTTAACC TWT781 899598 - 899071 - | hypothetical protein TERM 645 899419 - 899429 + gr 73 -4.6 -4.87665 | opp_overlap 899419 CTGACCGTCAGGCAA TCGC GGG GCGG TTTTTATAACTGCCG TWT782 900001 - 899561 - | hypothetical protein eno 901308 - 899968 - | enolase TERM 646 900082 - 900068 - GR 75 -11.4 -3.03124 | TTGTACTTTGCAATA CGCTCG CCG CGAGCG GGCGCGCCAGTCTTT TWT784 901590 - 901369 - | hypothetical protein hisS 902867 - 901587 - | histidyl-tRNA synthetase TERM 647 902034 - 902019 - G 74 -3.3 -5.0133 | opp_overlap 902026, overlap 902023 902026 GAGCGGGTCAAAAAA TACAC CAGTTT GTGTA AACTCGTTGACCGAA nhaA 904021 - 902864 - | sodium-proton antiporter TERM 648 903004 - 902983 - G 72 -8.7 -3.73106 | overlap 902984 TCAAAACGGCAATAA CCCCCTGTT CATG AACAGGGGT TCCCAAAAAAGCTAG TERM 649 903003 - 902984 - G 79 -12.2 -2.83141 | overlap 902983 CAAAACGGCAATAAC CCCCTGTT CATG AACAGGGG TTCCCAAAAAAGCTA dcd 904608 - 904018 - | deoxycytidine triphosphate deaminase pdhC 906278 - 904956 - | branched-chain alpha-keto acid dehydrogenase subunit E2 pdhB 907300 - 906296 - | pyruvate dehydrogenase E1 component beta subunit pdhA 908409 - 907297 - | pyruvate dehydrogenase E1 component alpha subunit TERM 650 908677 - 908695 + G 72 -5.2 -4.60797 | GCAGGTATGGCCCAG CTGTGCGA GCA TTGCGCGG TTTTCTGTCTGAGAG purB 908622 - 910067 + | adenylosuccinate lyase TERM 651 910566 - 910551 - g 78 -5.4 -4.83243 | TGCAGACAAAATAAA CCGCAT TGGT ATACGG GTACAAGATTTATTT purA 910129 - 911418 + | adenylosuccinate synthetase TERM 652 911616 - 911604 - g 80 -6.3 -4.81082 | AACTAAGGAATAAAA TCGAT GCA ATCGA TAGCCAGATCCTAAT TWT793 911522 - 911839 + | putative chorismate mutase protein TERM 653 911829 - 911819 - T 73 -4.6 -4.89521 | ATATCGGAAACAAAA CGCC GAC AGCG CACCGTTTAGTGGCC purL 914221 - 911879 - | phosphoribosylformylglycinamidine synthase II TERM 654 914091 - 914120 + g 78 -4.9 -5.08169 | gap 1 GCAGTCGCGTTCTGT GCGT-GCGCGCTAG GCT TTTGCGCGCTAGGC TTTTTTGCGGTATCT purQ 915322 - 914642 - | phosphoribosylformylglycinamidine synthase I TERM 655 914695 - 914683 - G 81 -3.3 -5.28826 | overlap 914685 914686 AAATGGCAGAAAAAA CAGGG GCA CCGTG TAGCCCGGGTGGACC TWT796 915730 - 915326 - | hypothetical protein TERM 656 916172 - 916153 - g 72 -5 -4.56775 | gap 1, overlap 916139 AGGTGCTGTCAAAAA CACCCTGCT AGC AG-AGGGCG ATGATCCAGAACCCC TWT797 915752 - 916969 + | hypothetical protein TWT798 917718 - 916984 - | hypothetical protein TERM 657 918436 - 918451 + G 71 -6.8 -4.18018 | opp_overlap 918427 GGAAATCCGCAGGAC TCCGGT TCAA GCCGGA TTTTAACTGGCGCGG TERM 658 918594 - 918612 + G 83 -6.7 -5.04733 | overlap 918600 AACGCATCTGTTGCG GTCATGC AAAGA GCATGGC TTTTGTTTATGCTTC TWT799 917775 - 919331 + | transmembrane protein TERM 659 920293 - 920303 + G 74 -6.8 -4.37092 | overlap 920272 GTAAACATCCGGACG GGTC TGT GACC TTTTATCACCACGAT pcnA 919344 - 920798 + | poly(A) polymerase parB 921771 - 920875 - | chromosome partitioning protein ParB TERM 660 921501 - 921515 + g 73 -4.2 -4.82901 | opp_overlap 921501 CTCCAATCACAAGCA CATAGC CAA GCTTTG TTTTTCTGACAACAA TERM 661 921701 - 921688 - G 70 -2.3 -5.09225 | overlap 921689 ATTCGATGGAAAAAA TGCCT CAAT AGGCC CACGATCTGCAGGCG parA1 922663 - 921761 - | chromosome partitioning protein ParA TERM 662 922721 - 922692 - R 74 -10.9 -2.93723 | CCCCTATGAAGCACA GTTTCACGTGA GCCCAGTT TCACGTGAAAC CAAAAAGCACACCCC TERM 663 922747 - 922728 - R 83 -6.4 -4.99134 | gap 1, overlap 922729 922731 ACGTGAAACCAAAAA GCACACCCC AGT GAGG-GTGC AGACAAACCCAAAAG ctpA 925002 - 922852 - | cation-transporting ATPase TWT804 925583 - 925062 - | R2H domain-containing protein TWT805 926568 - 925567 - | putative inner membrane protein translocase component YidC TWT806 926770 - 926492 - | hypothetical protein TWT807 927101 - 926763 - | hypothetical protein rpmH 927266 - 927114 - | 50S ribosomal protein L34