TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.741588 %AT, 671009 nt, 4324 terms. Intergenic: 0.773293 %AT, H2T: 72775 nt, 569 terms; T2T: 21040 nt, 463 terms; H2H: 19862 nt, 382 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|13357558|ref|NC_002162.1| Ureaplasma parvum serovar 3 str. ATCC 700970, complete genome (length 751719) TERM 1 323 - 296 - g 73 -5.8 -4.56702 | opp_overlap 302 TTTTAATTAAAGAAA CTAATATTAAAA ATCG TTTTAATTTTAG TGATGAACTTTTACG dnaA 1 - 1374 + | chromosomal replication initiator protein rpL31 1515 - 1802 + | ribosomal protein L31 TERM 2 1868 - 1902 + F 90 -8.8 -4.74132 | opp_overlap 1860 1868 1873 1876, overlap 1873 1901 TTAAAAATTAGTAGA TTAAATAACAGGCAAT TAG ATTACCTGTTATTTTA TTTTTACTAAAATAT TERM 3 1902 - 1868 - f 84 -11 -2.94225 | opp_overlap 1868 1873 1901, overlap 1860 1873 1876 TTAAAAATTAGTAGA TTAAATAACAGGCAAT TAG ATTACCTGTTATTTTA TTTTTACTAAAATAT TERM 4 1873 - 1897 + F 95 -8.7 -5.3104 | opp_overlap 1873 1868 1860 1876, overlap 1868 AATTAGTAGATTAAA TAACAGGCAAT TAG ATTACCTGTTA TTTTATTTTTACTAA TERM 5 1897 - 1873 - f 93 -10.9 -3.87318 | opp_overlap 1868 1873, overlap 1868 1860 1876 AATTAGTAGATTAAA TAACAGGCAAT TAG ATTACCTGTTA TTTTATTTTTACTAA TERM 6 1894 - 1876 - f 77 -8.2 -4.05877 | opp_overlap 1873 1868, overlap 1873 1868 1860 TAGTAGATTAAATAA CAGGCAAT TAG ATTACCTG TTATTTTATTTTTAC prfA 1935 - 3014 + | peptide chain release factor 1 TERM 7 3157 - 3181 + G 72 -7.3 -3.69449 | opp_overlap 3157 3163, overlap 3156 3166 TAACCGCTTAACAAT TGTAAATTCTA ATT TAGAATATACA TATTTTAAACTATTA hemK 3014 - 3886 + | hypothetical protein UU005m 3873 - 4427 + | hypothetical protein lacA 4431 - 4895 + | galactoside O-acetyltransferase TERM 8 4898 - 4913 + F 71 -3.4 -5.51165 | GCAAAATAGTTAATT TTAAAA GTTT TTTTAA TTTTTTTAACATTTT UU007 4991 - 5551 + | hypothetical protein UU008 5554 - 6030 + | hypothetical protein TERM 9 6064 - 6089 + F 100 -7.7 -6.01369 | opp_overlap 6064 6071, overlap 6071 AAAAAGAAGAAGAAA GAGAGAAGAGT TAAA ACTCTTTTTTC TTTTTTTATTGTTTA TERM 10 6071 - 6082 + F 89 -4.4 -6.12458 | opp_overlap 6064 6071, overlap 6064 AGAAGAAAGAGAGAA GAGT TAAA ACTC TTTTTTCTTTTTTTA mgtE 6175 - 7797 + | Mg2+ ion transporter TERM 11 7924 - 7914 - f 84 -5.4 -5.35815 | overlap 7918 TATATTAAACAAAAA TGCA TGT TGCA AACACATATTCTAAA rplJ 7954 - 8454 + | 50S ribosomal protein L10 rplL 8479 - 8844 + | 50S ribosomal protein L7/L12 TERM 12 8867 - 8917 + T 93 -8.7 -5.09221 | gap 1, opp_overlap 8880 TTTTTTATAAATTGT TATTAATTAAAAACCGGCATCTTT TATA AAGGATACCGGTTTTTAATTC-TA TTTGTTTTTGTTCTA TERM 13 8905 - 8880 - T 86 -8.3 -4.90266 | opp_overlap 8867 GTTATTAATTAAAAA CCGGCATCTTT TATA AAGGATACCGG TTTTTAATTCTATTT UU012 10619 - 9069 - | membrane lipoprotein TERM 14 9902 - 9880 - G 70 -7.8 -3.13522 | overlap 9878 ATTGCTTCAGTAACA GCTATTCC AACTTGA GGAATAGC TACTGGTAAAATTAA TERM 15 10997 - 10982 - R 82 -4.7 -5.88565 | opp_overlap 10977 10982 TCTATAATAAAAAAA TGTGC AAATAA GCACA TTTTAATTTATCTTT rbsC-2 11934 - 11005 - | ribose/galactose ABC transporter TERM 16 11184 - 11168 - G 77 -7.3 -4.24123 | overlap 11160 GTAATAACTGCAAAA GCAATTG AAA CAACTGC AATTAGTGGAATTCT rbsC-1 14144 - 11934 - | ribose/galactose ABC transporter TERM 17 11961 - 12000 + g 86 -11.1 -3.29541 | opp_overlap 11973, overlap 11960 11972 CTCTTTCATGTTTTG TTGATTAATAATTGCTT TTTGAT AAGCAGTTGTTAATCAA TCTTCTAATAATAAT TERM 18 12561 - 12573 + g 71 -4.9 -4.8622 | ATATTTACTAATTTC TTTAG CCA CTAAA TTTTTAATTAAAAAA mglA 15754 - 14147 - | methylgalactoside permease ATP-binding protein TERM 19 14892 - 14869 - G 80 -8.2 -4.08689 | opp_overlap 14871, overlap 14871 TACTTAACAATGAAA CATCATCACC TTTT GGTGATGATT TAACTTTCACAATAT TERM 20 14890 - 14871 - G 87 -10.8 -3.62957 | opp_overlap 14871, overlap 14869 CTTAACAATGAAACA TCATCACC TTTT GGTGATGA TTTAACTTTCACAAT TERM 21 14871 - 14890 + g 93 -10.8 -3.84719 | opp_overlap 14871 14869 CTTAACAATGAAACA TCATCACC TTTT GGTGATGA TTTAACTTTCACAAT TERM 22 15093 - 15109 + g 70 -6.5 -4.17906 | opp_overlap 15092 CCGCGACGAATAACT GTTGCAG AAT CAGCAAC TTCTTTAATTTCATT UU016 17384 - 15810 - | lipoprotein TERM 23 16109 - 16119 + g 71 -2.6 -5.51402 | ATTTTTGTAATTCAC TAAA TGA TTTA TTTTTTTCACTATCT TERM 24 17313 - 17298 - G 72 -9 -2.67694 | opp_overlap 17291, overlap 17295 ACTATCATTACATGA TGCAGC AATA GCTGCA ACTGAAGTTAATGTA UU017 18352 - 17555 - | hypothetical protein trmE 19670 - 18354 - | tRNA modification GTPase TrmE TERM 25 18855 - 18841 - G 73 -5.8 -4.6635 | opp_overlap 18836 18831 18841 18840 AAATTTTCAACAAAA TCATTT GTT AAATGA ATTCCTGCAGTATCT TERM 26 19033 - 19069 + g 77 -4.7 -5.14894 | AACACCCTAATGCCT TTATTGATTGGTAAAAA TTT TTTTGATTGATCAATAA TTTTTGTAATTTTTT TERM 27 19517 - 19546 + g 72 -3.1 -5.36181 | overlap 19498 AAATTTGATTATCAT CTTTTAGAATT GTATACCA AATTTTAAAAG TTTCTTTTTTTATTT dnaH 20467 - 19673 - | DNA polymerase III delta subunit tmk 21169 - 20468 - | thymidylate kinase TERM 28 20535 - 20562 + gr 90 -5.8 -5.54192 | opp_overlap 20554, overlap 20538 CATAATACTTCATTT TCATTTTTATTG GCAT CAATAAAAATAA TTTTTTTAGGTTGAT TERM 29 20538 - 20559 + gr 70 -7.5 -3.52477 | opp_overlap 20554, overlap 20535 AATACTTCATTTTCA TTTTTATTG GCAT CAATAAAAA TAATTTTTTTAGGTT lip3 22010 - 21141 - | triacylglycerol lipase fatC-1 23132 - 22110 - | ferrichrome ABC transporter fatD-1 24158 - 23133 - | ferrichrome ABC transporter TERM 30 23339 - 23311 - G 72 -6.2 -4.33281 | ATTTGAAATAAATAA TTAGTTCTTTTA AAAAG TAAACGAACTAA ATGGGGCATAACAAT ABCsbp-1 25587 - 24175 - | putative ABC substrate-binding protein - iron fecC 26714 - 25611 - | ferrichrome ABC transporter TERM 31 26840 - 26858 + r 100 -13.2 -4.4261 | opp_overlap 26840 TAATAGGAATAAAAA CACAACCG CAT CGGTTGTG TTTTCCTCTTAAACA TERM 32 26858 - 26840 - R 100 -13.2 -5.19251 | opp_overlap 26840 TAATAGGAATAAAAA CACAACCG CAT CGGTTGTG TTTTCCTCTTAAACA rpsB 27928 - 26879 - | 30S ribosomal protein S2 TERM 33 28038 - 28056 + r 74 -5.4 -4.76312 | overlap 28039 ATAAATTATTTATTT TGATTAAA TCC TTTAATCG TTTTTAAATATTCTA ABCsbp-2 28999 - 28028 - | putative ABC substrate-binding protein - iron TERM 34 28216 - 28233 + g 78 -2.8 -5.95449 | ATGTTTTATAATTTT CAATAA CTTCTT TTATTG TTTTTTGTTTTGTTT TERM 35 28648 - 28665 + g 91 -5.7 -5.65177 | GATATTGTTTAGCAT TCTTAAA ACCT TTTAAGA TTTTTTTGTAAGTGT ABCsbp-3 29760 - 29014 - | putative ABC substrate-binding protein - iron TERM 36 29599 - 29631 + g 79 -10.2 -3.03243 | gap 1, opp_overlap 29597, overlap 29597 ATCATCAATAGTATT GTTATCATTAGCAAA TTCT TTTGCTAATGA-AAC TGTTGGACGATAAGT TERM 37 29722 - 29698 - G 75 -9.4 -2.70476 | gap 1, overlap 29697 29712 AGCGCTAACGATAAG GGGAATTGCCA AAAT TGGCAA-TCCC AAAAAAGACATGATT UU029 31886 - 29766 - | hypothetical protein TERM 38 29937 - 29917 - G 71 -4.7 -4.78753 | overlap 29918 29920 CCAATATCAATAAAA CTACCAAAC TCT GTTTGGTTA CGAATTGTTCCTTGT TERM 39 29934 - 29920 - G 73 -8.6 -3.28327 | overlap 29918 29917 ATATCAATAAAACTA CCAAAC TCT GTTTGG TTACGAATTGTTCCT TERM 40 30480 - 30466 - G 75 -4.3 -5.1485 | overlap 30460 TAATCAATACAAAAA TCAAC TTTTT GTTGA AGAATGTTTTTATTA UU030 31996 - 34239 + | hypothetical protein TERM 41 35079 - 35095 + G 71 -6.7 -3.99352 | opp_overlap 35077 35079 ATGATAAAAGAAGTA TGATAAA GGT TTTATCA TTATATTTATTCGTT UU031 34634 - 35398 + | membrane lipoprotein TERM 42 35482 - 35460 - T 81 -6.4 -4.76312 | opp_overlap 35460 35453 GATAATATTTAAAAA TCTACTTTAC AAA ACAAAGTAGA TTAATAATTAGTTAT UU032 36017 - 35490 - | hypothetical protein UU033 36498 - 36025 - | hypothetical protein TERM 43 36325 - 36335 + g 70 -4 -5.15634 | overlap 36331 AGCTGGTTCATGAAC TCAA GCT TTGA TTTTTTCATCAAATA UU034 37615 - 36548 - | hypothetical protein TERM 44 36608 - 36618 + g 74 -2.6 -5.79595 | ATTTTTATTTTCATC TAAT TCG ATTA TTTTTTCTTTTAAAA UU035 38477 - 37719 - | hypothetical protein TERM 45 38168 - 38135 - G 91 -12.1 -3.01712 | opp_overlap 38134 38135 38137, overlap 38137 CTGTTTCGCCTAACA TATTCTCAAAATAAT TATT ACTATTTTGAGAATA ATTACTCATAACAAA TERM 46 38135 - 38168 + g 78 -9.9 -2.52516 | opp_overlap 38135 38137, overlap 38134 38137 CTGTTTCGCCTAACA TATTCTCAAAATAAT TATT ACTATTTTGAGAATA ATTACTCATAACAAA TERM 47 38166 - 38137 - G 79 -10.3 -3.06696 | opp_overlap 38135 38134 38137, overlap 38135 GTTTCGCCTAACATA TTCTCAAAATAAT TATT ACTATTTTGAGAA TAATTACTCATAACA TERM 48 38185 - 38207 + g 71 -5.7 -4.43173 | opp_overlap 38189 TTACTCATAACAAAT TTAATTGCT AGTCC AGCAATTGA TTTTCCATTATTTTT UU036 39545 - 38712 - | hypothetical protein TERM 49 39034 - 39053 + g 78 -4.4 -5.40474 | ACTAATATGTTTGTG GTTTTATT TGAA AGTAAAAC TTTTTTTAAAAAAAT TERM 50 39053 - 39071 + g 72 -3.2 -5.30616 | opp_overlap 39053 39054 39055, overlap 39055 TATTTGAAAGTAAAA CTTTTTTT AAA AAAATAAG TTTTTGTTTAGGTCC UU037 39906 - 39640 - | hypothetical protein UU038 40330 - 41721 + | hypothetical protein TERM 51 41840 - 41869 + G 74 -7.9 -3.51232 | GTGCTGGACACGCAG GATTAGAAGCAGC TTTT GCAACTTCTAATC TTAATTTACAAACAG TERM 52 42394 - 42383 - g 73 -5.8 -4.58283 | TAATTCGTTTAAAAA CAGG GACT CCTG CAAGAATTAAAAAAG gidA 41797 - 43641 + | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA TERM 53 43757 - 43741 - g 73 -6.7 -4.09353 | TATTCAAAAATATAA TCAAATT TTT AATTTGA CAAGACTTGATAGTG gidB 43700 - 44344 + | glucose inhibited division protein B UU041 44367 - 44729 + | hypothetical protein UU042 44729 - 45145 + | hypothetical protein UU043 45312 - 47828 + | membrane lipoprotein UU044 47851 - 50199 + | hypothetical protein TERM 54 52414 - 52430 + G 70 -8 -3.29263 | TTACCCAAACATTTT GCACCA GCAGG TGGTGC TTCTGGAACAAGTGT UU045 50230 - 52734 + | membrane lipoprotein UU046 52771 - 55146 + | hypothetical protein TERM 55 56457 - 56428 - g 82 -8.7 -3.8709 | overlap 56417 56411 AAATTGCTTTACAAA CATTTGGCATTCA AATT CAAACGCCAAATG GTAAACCACGCGAAT UU047 55161 - 57764 + | ATP/GTP-binding protein TERM 56 58207 - 58219 + G 70 -2 -5.62552 | opp_overlap 58207, overlap 58194 AGTGATTGCAACAAT TAGT TTCTT ACTA TTTTTTACTTTTTTT UU048 57794 - 59284 + | hypothetical protein UU049 59271 - 59786 + | hypothetical protein UU050 59789 - 60703 + | hypothetical protein UU051 60660 - 61172 + | hypothetical protein TERM 57 62714 - 62738 + G 72 -7.3 -3.66095 | opp_overlap 62717 62722, overlap 62717 ATGAGTTTAATAATT TAACAAAAGAA AAT TTCTTTCGTTA TTTAAATAACACTTT UU052 61162 - 63327 + | hypothetical protein TERM 58 64602 - 64612 + G 73 -6.8 -4.11371 | opp_overlap 64601 AAGTACTAAGCTAAT TGCC TGA GGCA TTTTAAAAGGTGTTA atpA-1 63343 - 64878 + | F0F1 ATP synthase subunit alpha atpD-1 64878 - 66242 + | F0F1 ATP synthase subunit beta TERM 59 66270 - 66296 + F 100 -8.8 -5.46657 | opp_overlap 66270 TATATTAAATTTAAA CCTTGGTAACTA TAT TAATTACCGAGG TTTTTTATTAAAATG TERM 60 66296 - 66270 - f 79 -8.8 -3.8822 | opp_overlap 66270 TATATTAAATTTAAA CCTTGGTAACTA TAT TAATTACCGAGG TTTTTTATTAAAATG TERM 61 67904 - 67880 - g 85 -10.1 -3.76387 | AAAAACAGAAATTAA GCTTGTTGATA AAC TGTCAACAAGC GGTGATAATGCAGGA mnuA-1 66507 - 69923 + | hypothetical protein TERM 62 69976 - 69921 - f 84 -9.4 -3.93597 | gap 1, opp_overlap 69925 69930 69967, overlap 69924 69925 69930 AAAAACGACACTAAA TAAGCAAAATGATAACCTCGTGTTCAA AAA TTAAACTAGGGGTTATCATTTTG-TTA AATGTTATAATAATA TERM 63 69974 - 69924 - f 82 -9.2 -4.0648 | opp_overlap 69925 69930 69967, overlap 69921 69925 69930 AACGACACTAAATAA GCAAAATGATAACCTCGTGTTCAA AAA TTAAACTAGGGGTTATCATTTTGT TAAATGTTATAATAA TERM 64 69973 - 69925 - f 91 -12.7 -3.02803 | opp_overlap 69925 69930 69967, overlap 69924 69921 69930 ACGACACTAAATAAG CAAAATGATAACCTCGTGTTCAA AAA TTAAACTAGGGGTTATCATTTTG TTAAATGTTATAATA TERM 65 69925 - 69973 + F 93 -12.7 -3.2244 | opp_overlap 69925 69924 69921 69930, overlap 69930 69967 ACGACACTAAATAAG CAAAATGATAACCTCGTGTTCAA AAA TTAAACTAGGGGTTATCATTTTG TTAAATGTTATAATA TERM 66 69930 - 69968 + F 77 -6.8 -4.71776 | opp_overlap 69925 69924 69921 69930, overlap 69925 69967 ACTAAATAAGCAAAA TGATAACCTCGTGTTCAA AAA TTAAACTAGGGGTTATCA TTTTGTTAAATGTTA TERM 67 69968 - 69930 - f 77 -6.8 -4.63107 | opp_overlap 69930 69925 69967, overlap 69925 69924 69921 ACTAAATAAGCAAAA TGATAACCTCGTGTTCAA AAA TTAAACTAGGGGTTATCA TTTTGTTAAATGTTA secG 70018 - 70242 + | preprotein translocase subunit SecG TERM 68 71010 - 70985 - g 75 -4.1 -5.17488 | gap 1, opp_overlap 70985 71008, overlap 70954 AACATCAAAACAAAA TTCGACGTTCAA TAA TTGATCGT-GAA ATTATTTCTATTGAT TERM 69 71759 - 71749 - g 76 -4 -5.47821 | opp_overlap 71749 ATTGAGGCAAAAAAA TTGA GTT TCAA TATCTCACATGATTT vacB 70243 - 72408 + | virulence associated protein - exoribonuclease smpB 72608 - 73033 + | SsrA-binding protein TERM 70 73011 - 73023 + F 91 -9.1 -4.77698 | opp_overlap 73007 AAAAAAGAGATTTAG CGCGT GAA ACGCG TTTATTTTAATATTA TERM 71 74430 - 74418 - gf 74 -4.9 -4.99435 | TCTAAGAATGAAAAA TTAGA ATC TCTAA TAGCACAAAGGGCTC msbA-1 73014 - 74792 + | transport ATP-binding protein msbA-2 74767 - 76563 + | transport ATP-binding protein TERM 72 77248 - 77228 - g 90 -9.9 -4.05677 | opp_overlap 77226 AAATAATTTAAATAA TGTTTTTGA TCG TCAAAAACA CGCTATTTATAAACT UU061 76623 - 77417 + | hypothetical protein TERM 73 78710 - 78696 - g 71 -5 -4.7497 | opp_overlap 78696 TCCACTTACTAAAAA GAATCA GAG TGATCC TCGTTTTGTAGATCG lysS 77527 - 79008 + | lysyl-tRNA synthetase TERM 74 79066 - 79096 + T 95 -5.7 -6.4753 | opp_overlap 79066 79065 79084 AACTAATAACAATAC TACAAAATGTT AATAAATCA AACATTTTGTA TTTTTTTTTATTTCC UU063 79772 - 79296 - | hypothetical protein TERM 75 79906 - 79866 - R 86 -8 -4.87318 | gap 1, overlap 79897 TCCAAAAGTTAAAAA TAAAAAAAGATTGACT-GT GTTA ACTACTCAATCTTTTTTTA TGAAAAACGAAAAAT UU064 80206 - 79940 - | hypothetical protein pepF-1 82057 - 80231 - | oligoendopeptidase F - zinc metalloprotease TERM 76 82723 - 82740 + G 73 -5.7 -4.63486 | overlap 82719 AAATGATGTTATTTA TCAAAAT AAAA ATTTTGA TTTTATTGGCCCAAT pta 82145 - 83026 + | phosphotransacetylase TERM 77 83066 - 83035 - T 81 -6.1 -5.01042 | gap 1, opp_overlap 83035 83048 AACTTAAATTAAAAA CCACTAAAGC-TAA GTATT TTATACTTTAGTGG CTGATTTTAATTAAT UU067 83687 - 83073 - | hypothetical protein UU068 84381 - 83725 - | hypothetical protein fecE 85347 - 84472 - | iron(III) dicitrate transport ATP-binding protein hmuU-1 86422 - 85352 - | hemin transport system permease ABCsbp-4 88408 - 86441 - | putative ABC substrate-binding protein - iron TERM 78 89332 - 89317 - g 74 -2.6 -5.72053 | gap 1, overlap 89319 TAATTAAACAAAAAA TG-GTTC CAT GAACACA AGTTGTTAAAATTAA hlyC 88641 - 89969 + | hemolysin TERM 79 89965 - 89954 - T 71 -3 -5.53288 | TTTAATTGAAAAAAA GATT AATC AATC CTAAACAATGAGATA TERM 80 89974 - 90018 + T 72 -8.4 -2.84982 | gap 1, opp_overlap 89987, overlap 89987 ATCAATCCTAAACAA TGAGA-TAAAAAAACTAGTTT TTAA AAACTAGTTTTTTTAATTTTA ATTCTTCATACATTT TERM 81 90004 - 89987 - T 100 -7.1 -5.75478 | opp_overlap 89974 89987 AATGAGATAAAAAAA CTAGTTT TTAA AAACTAG TTTTTTTAATTTTAA TERM 82 89987 - 90004 + T 100 -7.1 -5.79588 | opp_overlap 89987, overlap 89974 AATGAGATAAAAAAA CTAGTTT TTAA AAACTAG TTTTTTTAATTTTAA UU073 90979 - 89987 - | hypothetical protein TERM 83 90126 - 90112 - GT 81 -7.2 -4.67968 | opp_overlap 90108 90105 TTAATAAACAAGAAA GTTCAT TTA ATGAAC AGTCTGGATTTTGTA trxB 91874 - 90945 - | thioredoxin reductase lgt 92900 - 91893 - | prolipoprotein diacylglyceryl transferase TERM 84 91939 - 91956 + g 73 -7.1 -4.09508 | GGCTTTCTTAATTCT CCAAATT TATG AATTTGG TCTTTCTTTTTATAA TERM 85 92329 - 92339 + g 75 -3.2 -5.58074 | ATTCCTTCGAAAACA GCTG GCA TAGC TTTTTTTAATCATTG TERM 86 92654 - 92629 - G 82 -4.1 -5.79588 | gap 1 CTAAAATCAAAAAAA TCTTTAGC-ATC ACC GATTGCTAATGA TCATAAACGAGCACC hprK 93827 - 92901 - | HPr kinase/phosphorylase UU077 94843 - 93842 - | hypothetical protein pth 95366 - 94806 - | peptidyl-tRNA hydrolase TERM 87 95631 - 95615 - g 70 -2.3 -5.61596 | opp_overlap 95615 ATTTCTATAAAAAAA TTAATTG AAG CAATAAA ATTTAGTACAACAAT dnaN 95588 - 96727 + | DNA pol III beta chain UU080 96865 - 97083 + | hypothetical protein TERM 88 98095 - 98074 - g 71 -5.9 -4.48072 | ACACTGATGATAAAA TCACTAAAG AAGA CGTTAGTGA AGGATTAACAGCAAT gyrB 97095 - 99047 + | DNA gyrase subunit B gyrA 99069 - 101591 + | DNA gyrase subunit A TERM 89 101632 - 101618 - f 77 -5.8 -5.07053 | opp_overlap 101608 101617 101618 101630 101631, overlap 101608 AACTACTTTAAAAAA TAAAGT TAT ACTTTA CTTTTTCTAAAAGTG UU083 101699 - 102169 + | hypothetical protein recA 102208 - 103212 + | recombinase A TERM 90 103403 - 103389 - g 73 -3.6 -5.40072 | overlap 103401 CTTCTTTTAAAAAAA TAGTTC AAA AAACTA AAGATTTAGAAGAAG UU085 103244 - 104665 + | hypothetical protein TERM 91 104718 - 104668 - T 75 -9.4 -2.63913 | opp_overlap 104673 104683, overlap 104683 TATTATTGGATAGTA TGAAATAATAAAAAAGAAGCAAGA CTA CCTTGTTTCTTTTTTATTATTTTC TTTTATATGTTTTTT TERM 92 104673 - 104713 + T 100 -15.2 -5.24647 | opp_overlap 104668 104683, overlap 104683 TTGGATAGTATGAAA TAATAAAAAAGAAGCAAG ACTAC CTTGTTTCTTTTTTATTA TTTTCTTTTATATGT TERM 93 104683 - 104703 + T 100 -6.2 -5.77677 | opp_overlap 104668 104683, overlap 104673 TGAAATAATAAAAAA GAAGCAAG ACTAC CTTGTTTC TTTTTTATTATTTTC TERM 94 104703 - 104683 - T 82 -4.7 -5.72254 | opp_overlap 104683 104673, overlap 104668 TGAAATAATAAAAAA GAAGCAAGA CTA CCTTGTTTC TTTTTTATTATTTTC TERM 95 104733 - 104754 + T 82 -5.3 -5.67711 | CTTTTATATGTTTTT TATCTGAAT TTTT ATTTAGATA TTTTTGTTTTGTTTG dgk 105562 - 104864 - | deoxyguanosine kinase TERM 96 105361 - 105343 - G 77 -6 -4.7889 | opp_overlap 105342 ATAAAGACCCAAAAA GAACGTTA TTC TCACGTTC ATACATTTTTGCTAG TERM 97 105859 - 105830 - g 100 -13.9 -3.19026 | opp_overlap 105835 105838, overlap 105835 105838 TAGGTCAAGATTTAA TTAAACAAGCATT AATG AATGCTTGTTTAA ACAACAAAATTACAC TERM 98 105835 - 105854 + G 82 -9.4 -3.53091 | opp_overlap 105830 105835 105838, overlap 105838 CAAGATTTAATTAAA CAAGCATT AATG AATGCTTG TTTAAACAACAAAAT TERM 99 105854 - 105835 - g 86 -9.4 -3.95817 | opp_overlap 105835 105838, overlap 105830 105838 CAAGATTTAATTAAA CAAGCATT AATG AATGCTTG TTTAAACAACAAAAT TERM 100 106725 - 106739 + G 75 -4.4 -5.24515 | TAATTTTAATGGTAA TTATTT GTT AAATAA TTTTATTTCTTTATT TERM 101 106748 - 106783 + G 71 -5 -4.81249 | opp_overlap 106779, overlap 106779 106779 TAAATAATTTTATTT CTTTATTTAATAATTT AAAA AAATCATTAAATCAAG TTTTTGAATTTGAAA TERM 102 106998 - 106982 - g 75 -3.1 -5.58522 | TATACAAAACAAAAA TTTTTTA TCA CAAAAAA ATTAACAACCAGAAT dnaX 105760 - 107553 + | DNA polymerase III subunits gamma and tau UU088 107561 - 107860 + | hypothetical protein recR 107869 - 108474 + | recombination protein RecR UU089.1 108529 - 108798 + | hypothetical protein TERM 103 108832 - 108854 + F 79 -4.8 -5.62219 | TTTTTATTTTTTGAT TGAGCTGGTG GTA TGCTGGCTCA TTTTTTTAATATATT UU090 108844 - 110598 + | hypothetical protein TERM 104 111402 - 111392 - g 79 -4 -5.69793 | opp_overlap 111392 ACATCAAAGAAAAAA CAAT TGG ATTG TATGTTGAAGCAAAC ffh 111214 - 112560 + | signal recognition particle TERM 105 112564 - 112576 + F 83 -3.4 -6.17669 | opp_overlap 112564 TTATTTAGTTAAAAA TGGT TATAC ACCA TTTTTTTATTTTATT TERM 106 112991 - 113034 + G 71 -8.4 -2.82453 | opp_overlap 112973 113006, overlap 112990 112988 ATGACAACAATTTTT GCTTCACTAAAAGCATTAAA TATT TTTAAGGATTTTAGTGAAGA TGGTATTGATATTTT TERM 107 113967 - 113942 - g 72 -9.2 -2.68761 | opp_overlap 113941, overlap 113941 113939 ATGATTATTAAAGAG GTATTAAACG TAAGAT CGTTTAATAC ATATGCTAATAATTT UU092 112772 - 114559 + | membrane lipoprotein bcrA 114559 - 115269 + | ABC transporter UU094 115391 - 118555 + | membrane lipoprotein hsdR 123295 - 120158 - | type I restriction enzyme R protein TERM 108 121750 - 121770 + g 74 -9.1 -3.05832 | TTTTATCTATTCCAG TTGATGATG TTT CATCGTCAA TGTCATCTTTTTCGC hsdS-1 123837 - 123316 - | type I restriction enzyme S protein (fragment) hsdS-2 124184 - 123975 - | type I restriction enzyme S protein (fragment) TERM 109 124966 - 124976 + G 77 -5.4 -5.00884 | GTGTGATTCAATTAC CAGA TAA TCTG TTTTTTGGAACAAGT hsdM-1 124317 - 125363 + | type I restriction enzyme M protein (fragment) hsdS-3 125367 - 126272 + | type I restriction enzyme S protein (fragment) TERM 110 126309 - 126291 - f 75 -6.2 -4.56791 | ACTTAAAAATATAAA TTTATAAA GGG TTTATAAA TATGGATAATAAAAA hsdM-2 126311 - 126874 + | type I restriction enzyme M protein (fragment) TERM 111 126886 - 126860 - T 100 -6.7 -5.76237 | opp_overlap 126860 126862 TATATAAATAAAAAA GAGATTCCTAA TTAAC TTAGTAATCTC TATCATTTAATTAAA UU101 127478 - 126912 - | hypothetical protein TERM 112 129241 - 129255 + G 70 -7.2 -3.54408 | GTATTTTATATGTAC TTGATG AAC CATCAA TTGGTTTGCATCAAC uvrA 127704 - 130535 + | excinuclease ABC subunit A TERM 113 130680 - 130663 - g 80 -4.9 -5.29885 | AATCCAAAAATAAAA CCCAATA AAAT TATTGAG AAAATTGATCAAGCA UU103 130540 - 132204 + | membrane lipoprotein hpt 132231 - 132851 + | hypoxanthine-guanine phosphoribosyltransferase TERM 114 134032 - 134042 + G 73 -6.8 -4.07687 | opp_overlap 134022 GATGACGCAATTTTA CGTC CTG GACG TTTTGACCGACAAAT TERM 115 134902 - 134881 - g 77 -7.4 -4.24075 | opp_overlap 134884, overlap 134858 ATTCACCAATACAAA CAATTACC ACCAGA GGTAATTG CTAATAAAAACAAAC ftsH 132856 - 135021 + | ATP-dependent zinc metallopeptidase - cell division protein serS 135132 - 136388 + | seryl-tRNA synthetase TERM 116 136438 - 136393 - f 89 -10.1 -4.26202 | opp_overlap 136398, overlap 136398 ACATCTATTAATAAA TAAAATAAGAAGTTAACTTTA GTCA TAAAGCTAGCTTCTTATTTTT AATAAATACTGCTTG TERM 117 136398 - 136433 + F 95 -10 -4.75372 | opp_overlap 136393 136398 TATTAATAAATAAAA TAAGAAGTTAACTTTA GTCA TAAAGCTAGCTTCTTA TTTTTAATAAATACT TERM 118 136433 - 136398 - f 100 -10 -5.12172 | opp_overlap 136398, overlap 136393 TATTAATAAATAAAA TAAGAAGTTAACTTTA GTCA TAAAGCTAGCTTCTTA TTTTTAATAAATACT TERM 119 136564 - 136577 + F 72 -2.4 -5.74086 | opp_overlap 136564 AAAAAATAAATTAAA CTCT AAAAAA AGAG TTTTTTCTTTGCTTT TERM 120 136746 - 136761 + F 100 -7.6 -5.64328 | opp_overlap 136746 136745 136748 TCAATTTTGAAATAT CATGAG TTTA CTCATG TTTTATTTTTTTATT TERM 121 137317 - 137306 - g 75 -4.4 -5.1361 | AGAAATGCGAAAAAA CCAA TATC TTGG CACACTTGATGAACT potA 136791 - 138350 + | spermidine/putrescine transport ATP-binding protein potB 138334 - 139341 + | spermidine/putrescine transport system permease potC 139328 - 140182 + | spermidine/putrescine transport system permease TERM 122 142096 - 142137 + G 81 -9.9 -3.22924 | gap 1, overlap 142104 142107 142133 TGAAGAACACGCTGC TTTAAACGCGACATTAAGAA AAA TTTTTAATGTT-CGTTTAAA TATTAATACTTTAGA UU110 140186 - 142222 + | membrane lipoprotein UU111 142320 - 142922 + | hypothetical protein TERM 123 142950 - 142920 - f 78 -9.2 -3.56836 | opp_overlap 142925, overlap 142908 142925 AAATCATTTGTTAAA TAAAATACCAAGTC TAA AACTTGGTATTTTT CACAGATAAGTTAAT TERM 124 142945 - 142925 - f 91 -9.1 -4.87133 | opp_overlap 142925, overlap 142920 ATTTGTTAAATAAAA TACCAAGTC TAA AACTTGGTA TTTTTCACAGATAAG TERM 125 142925 - 142945 + F 86 -8.4 -4.58395 | opp_overlap 142925 142920 ATTTGTTAAATAAAA TACCAAGT CTAAA ACTTGGTA TTTTTCACAGATAAG TERM 126 143135 - 143119 - g 100 -5.3 -5.9663 | opp_overlap 143119 AAATATTAAAAAAAA TAAAATT TTT AATTTTA ATAAAAAATTCAATC TERM 127 143155 - 143144 - g 75 -3 -5.4756 | AATTTTAATAAAAAA TTCA ATCC TGAA CAAGAAATTAATTCA TERM 128 143344 - 143360 + G 89 -8.1 -4.79053 | TACATATTATAATTT CGATTTT GAA AAAATCG TTTATTTTGATGTTT UU112 142985 - 144112 + | hypothetical protein TERM 129 144516 - 144530 + G 85 -8.6 -4.26076 | opp_overlap 144516 144525 ATATTTAGTTAAAAA GGATGA ATA TCATCC TTTTGATGAAAGTGC TERM 130 144530 - 144516 - g 90 -8.6 -4.67755 | opp_overlap 144516, overlap 144525 ATATTTAGTTAAAAA GGATGA ATA TCATCC TTTTGATGAAAGTGC sfhB 144136 - 145083 + | pseudouridine synthase (uracil hydrolase) TERM 131 147437 - 147422 - f 72 -7.6 -3.62096 | opp_overlap 147421 GGGGAGTAGGCCAAA CCGAAT TTCG ATTCGG GGTTGTAGGACTACA TERM 132 150232 - 150256 + F 76 -3.6 -5.71983 | opp_overlap 150232 ATCGCTACGCTAAAA CCAACCTT GAAATTTAA GAGGTTGG TTTTTTTATACTTAA folA 150369 - 150839 + | dihyrofolate reductase TERM 133 151340 - 151313 - gT 73 -5.7 -4.72272 | GTGGTTTACTAAAAA TTATGAACAAC TGTAAT GTTGATCATAA AAATACTTTATTGAT gph 150787 - 151527 + | phosphoglycolate phosphatase TERM 134 151692 - 151673 - T 100 -6.5 -5.80003 | opp_overlap 151673 TTAATAAATAAAAAA GCAATTC TATTAT GAATTGC TTTTTTTATTCTTTA TERM 135 151673 - 151692 + T 100 -6.5 -6.01369 | opp_overlap 151673 TTAATAAATAAAAAA GCAATTC TATTAT GAATTGC TTTTTTTATTCTTTA upp 152345 - 151722 - | uracil phosphoribosyltransferase TERM 136 152440 - 152464 + r 74 -8.7 -3.23235 | opp_overlap 152445, overlap 152445 152463 ACTTAATAAAATGAA AAAAACTAGCA AAA TGCTAGTTTTA TTACATTAATATATG TERM 137 152445 - 152459 + r 86 -8.6 -4.72631 | opp_overlap 152445, overlap 152440 ATAAAATGAAAAAAA CTAGCA AAA TGCTAG TTTTATTACATTAAT TERM 138 152459 - 152445 - R 100 -8.6 -5.81622 | opp_overlap 152445 152440 ATAAAATGAAAAAAA CTAGCA AAA TGCTAG TTTTATTACATTAAT TERM 139 152579 - 152595 + r 76 -6.7 -4.49958 | opp_overlap 152579 152578 152581 152586, overlap 152586 ATTATAAATAAAATT GATTAAA TTT TTTAATC TTTATTTCATAAAAT tyrS 153837 - 152590 - | tyrosyl tRNA synthetase TERM 140 153519 - 153531 + g 77 -4.9 -5.27023 | GAGAATTAGTAAATT TTTCA AGT TGAAA TTTTATTTTTGCAAT ABC-1 153976 - 154878 + | ABC transporter secA 154895 - 157408 + | preprotein translocase subunit SecA TERM 141 158884 - 158870 - g 72 -4.3 -4.9445 | opp_overlap 158870, overlap 158864 ATAATGAATTAAAAA CACTA GAGCG TAGTG TTATTATCAATAAAT uvrB 157411 - 159411 + | excinuclease ABC subunit B TERM 142 159792 - 159774 - g 88 -5.4 -5.48825 | GATGATTTAAAAAAA TTTGATCA AGA TAATCAAA ATGCTAGTGTCGATT TERM 143 161289 - 161273 - g 72 -8.1 -3.44527 | opp_overlap 161246 161244 161261 TATTTATGATGATAA CATCAAT ATA ATTGATG AATATAAAAATAAAA lig 159495 - 161516 + | DNA ligase TERM 144 161799 - 161781 - f 81 -4 -5.92399 | opp_overlap 161784 TAACAAAAGAAAAAA CAATTTTT AAA AAAAATTA TAAAAAAAAACATAG TERM 145 162063 - 162079 + G 76 -3.8 -5.5353 | TCGGAACAATGGTTT TAAGTT TAAAT AACTTA TTTTTTGTTACTATG UU122 161867 - 162448 + | hypothetical protein cysS 162462 - 163772 + | cysteinyl-tRNA synthetase TERM 146 164268 - 164240 - g 93 -10.5 -3.86653 | opp_overlap 164240 164247, overlap 164247 ATTTATCAAATACAA TAAAAAACCTTCA AGA TGAAGGTTTTTGA GTTTATGCGACAAGT TERM 147 164240 - 164268 + G 82 -10.5 -2.91395 | opp_overlap 164240 164247, overlap 164247 ATTTATCAAATACAA TAAAAAACCTTCA AGA TGAAGGTTTTTGA GTTTATGCGACAAGT TERM 148 164261 - 164247 - g 100 -8.6 -5.66338 | opp_overlap 164240 164247, overlap 164240 AAATACAATAAAAAA CCTTCA AGA TGAAGG TTTTTGAGTTTATGC TERM 149 164247 - 164261 + G 93 -8.6 -4.84529 | opp_overlap 164247 164240, overlap 164240 AAATACAATAAAAAA CCTTCA AGA TGAAGG TTTTTGAGTTTATGC spoU-1 163774 - 164493 + | rRNA methylase UU125 165686 - 164502 - | lipoprotein UU126 168952 - 165698 - | hypothetical protein TERM 150 167141 - 167153 + g 82 -6.3 -5.03145 | TAATGAAATTTGAGA CCTTA ACA TAAGG TTTTTTCACAGGTTA TERM 151 169081 - 169035 - R 100 -12 -4.04764 | opp_overlap 169034 169033 169039, overlap 169039 AAAAGAATTGATAAA TAAAGATAAAACGGCGTT TTGTTAAAATC AACACCGTTTTATCTTTA AATCTTTTTGTTAAT TERM 152 169077 - 169039 - R 86 -8.4 -4.59089 | opp_overlap 169039 169034 169033, overlap 169035 GAATTGATAAATAAA GATAAAACGGCGTT TTGTTAAAATC AACACCGTTTTATC TTTAAATCTTTTTGT UU127 169384 - 169079 - | hypothetical protein TERM 153 169524 - 169487 - R 100 -8.7 -5.75945 | opp_overlap 169487 169494 169496, overlap 169496 ATTTTTTAAAAAAAA TAAAAAAAACAAGAAGA AAAT TCCTCTTGTCTTTATTA TTTTATCGATCTTTA TERM 154 169515 - 169496 - R 100 -7.2 -6.47325 | opp_overlap 169494 169487 169496, overlap 169487 AAAAAATAAAAAAAA CAAGAAGA AAAT TCCTCTTG TCTTTATTATTTTAT atpC 169937 - 169527 - | ATP synthase epsilon chain atpD-2 171331 - 169937 - | F0F1 ATP synthase subunit beta atpG 172218 - 171358 - | F0F1 ATP synthase subunit gamma TERM 155 171445 - 171460 + g 72 -3.2 -5.28176 | overlap 171446 TAATTTATAATTTTC AGCCAA TGCT TTGGCA TTTTTTGTAGCTGCA UU131 173026 - 172220 - | hypothetical protein TERM 156 172981 - 173001 + g 71 -4.8 -4.89562 | gap 1, overlap 172976 172981 172982 GTTTAATTTTTGGAA G-TTTGCTG AATT CAGCAAAGC TTTTATTCATTTTAA TERM 157 172982 - 172999 + g 70 -8.5 -2.69639 | overlap 172981 172981 172976 TTTAATTTTTGGAAG TTTGCTG AATT CAGCAAA GCTTTTATTCATTTT atpA-2 175425 - 173026 - | ATP synthase subunit A TERM 158 173730 - 173748 + g 72 -3.2 -5.33331 | overlap 173713 CAAGAATTTCTTGTG GTTCAA CGAAATC TTGAAC TTTTTCTTCTATTTG TERM 159 173896 - 173920 + g 93 -10.9 -3.9122 | TGTTTGTTCAGCTTC TTCACAAGGTT TAA AATCTTGTGAA TTATTTAAGAAACTG atpH-1 175727 - 175428 - | ATP synthase delta chain C-term atpH-2 176276 - 175737 - | ATP synthase delta chain N-term atpF 176897 - 176280 - | F0F1 ATP synthase subunit B TERM 160 176434 - 176446 + g 70 -6.3 -4.08216 | opp_overlap 176441 TTTTCTCTACGTTCA TTAGC AAT GCTAA TTTTAGCAGAACTAA atpE 177295 - 176966 - | ATP synthase C chain atpB 178171 - 177344 - | F0F1 ATP synthase subunit A UU138 178652 - 178197 - | hypothetical protein TERM 161 178299 - 178287 - G 74 -6.3 -4.43397 | TGTTAAAACAAATAA TGAGA TGG TCTCA AAAATAGATTGATAA TERM 162 178626 - 178616 - G 71 -2.6 -5.49809 | opp_overlap 178616 GAAAGGGTAAAAAAA TTAT TAG ATAA CTATTGATCATTCTT TERM 163 178970 - 178986 + G 73 -6.7 -4.09243 | TAAAACGGATGTTTT TTTGATT ATA AATCAAA TTTTAAAACAATATA UU139 178869 - 179579 + | hypothetical protein TERM 164 180378 - 180364 - g 71 -5.8 -4.5448 | CACTGACAAAAACAA TTGAAT GAT ATTCAA GAAAATTTAAAAGAA p115 179641 - 182586 + | p115 protein ftsY 182589 - 183644 + | SRP family GTP-binding protein UU142 183634 - 183933 + | hypothetical protein TERM 165 183954 - 183989 + T 100 -8.6 -5.79588 | gap 1, opp_overlap 183935 183954 TTATTAAAATAAAAA GAAAGAAACGGTTATTA AAT TAACAAC-GTTTCTTTC TTTTTTTAATTTTGA TERM 166 183989 - 183954 - T 100 -10.8 -5.50723 | gap 1, opp_overlap 183954, overlap 183935 TTATTAAAATAAAAA GAAAGAAACGGTTATTA AAT TAACAAC-GTTTCTTTC TTTTTTTAATTTTGA UU143 187855 - 184037 - | hypothetical protein TERM 167 184537 - 184558 + g 71 -6.1 -4.3898 | CCTCTAATGGTTTTA TATTTTTTA AACT TAAAAAATA TTTTATAACACTAGT TERM 168 185338 - 185316 - G 72 -4.3 -4.95167 | CAATTAACAATAAAA TCATATCTT CCAAT AAAATATGA CGGTTGATTTGAATT TERM 169 185581 - 185597 + g 100 -10.9 -4.9725 | opp_overlap 185578 185575 185583 AAATAGGAATTATCA CATGCGA TCT TCGCATG TTTTTATCTACAAGT TERM 170 185757 - 185785 + g 73 -9.1 -2.81768 | overlap 185756 TTTTTTAATCCTTCA TCTTTAATTGC TAAATGT GCAATTAAAGA ATTTAGATGATATGA TERM 171 187594 - 187635 + g 76 -6.3 -4.64486 | opp_overlap 187608, overlap 187591 187598 187601 AGGTTATAGTAGTAT TTGGTGATTTAAAATTAAA TTTT TTTAATTTTAAATTAATAA TTGTTTTATTTTGAT TERM 172 187598 - 187631 + g 72 -9.3 -2.50563 | opp_overlap 187608, overlap 187594 187591 187601 TATAGTAGTATTTGG TGATTTAAAATTAAA TTTT TTTAATTTTAAATTA ATAATTGTTTTATTT TERM 173 187601 - 187628 + g 77 -8.8 -3.36965 | opp_overlap 187608, overlap 187598 187594 187591 AGTAGTATTTGGTGA TTTAAAATTAAA TTTT TTTAATTTTAAA TTAATAATTGTTTTA TERM 174 188087 - 188071 - RH 71 -8.7 -2.62396 | opp_overlap 188085, overlap 188073 CAGTTGGTTAGAGCA CACCCCT GAT AAGGGTG AGGTCGGTGGTTCGA TERM 175 188215 - 188233 + rH 100 -8.9 -5.60689 | opp_overlap 188215 TTATAATTATAAAAA CCAAACC AAAAC GGTTTGG TTTTTTCTTCTCTAA TERM 176 188233 - 188215 - RH 95 -9.6 -5.01535 | opp_overlap 188215 TTATAATTATAAAAA CCAAACCA AAA CGGTTTGG TTTTTTCTTCTCTAA UU144 189029 - 188298 - | hypothetical protein TERM 177 188639 - 188653 + gH 71 -2.9 -5.58522 | ATTGTGATTTTTTAA TTTCA ACAAC TGAAA TTTTTGTTTTATCTG ripX 189018 - 189800 + | integrase-recombinase protein TERM 178 190243 - 190265 + G 74 -9.2 -3.05914 | GAAATCCAATCAGTG CCATCTTGAA AGT TTCAAGCTGG TGTATATGATTACAT UU146 189790 - 190416 + | hypothetical protein UU147 190400 - 190573 + | hypothetical protein UU148 190575 - 190916 + | hypothetical protein UU149 190922 - 191218 + | hypothetical protein UU150 191225 - 191461 + | hypothetical protein UU151 191418 - 191600 + | hypothetical protein UU152 191566 - 191829 + | hypothetical protein TERM 179 191891 - 191876 - g 93 -4.8 -5.99154 | GATGAAACAAAAAAA GTAATT AGCA AATTAC AACAAACAAATAATT UU153 191819 - 192154 + | hypothetical protein UU154 192154 - 192810 + | hypothetical protein TERM 180 192969 - 192985 + G 70 -7.3 -3.53811 | opp_overlap 192969 TTAGTGAATATTTAA TGGAACG TAT TGTTCCA TTTGAAAACAATAAA UU155 192800 - 193489 + | hypothetical protein UU156 193479 - 193940 + | hypothetical protein UU157 193922 - 194599 + | hypothetical protein TERM 181 194669 - 194688 + T 78 -4.3 -5.83211 | opp_overlap 194669 CTAGAATAAAAAAAG GTGTTAG TTGAAT CTAGCAC TTTTTTATTTTAATA TERM 182 194739 - 194717 - T 72 -8 -3.42228 | opp_overlap 194702 194723, overlap 194716 TAATTTAAAACAAAT TATATATTAT GTT ATAATATATA CACTAGTACACGTTG TERM 183 194900 - 194911 + T 74 -7.2 -4.11039 | opp_overlap 194900 TTTTTGCTTAAAGTA CGCC CAAT GGCG TTGTTTAATTAATCT TERM 184 195170 - 195152 - T 100 -7.4 -5.79595 | opp_overlap 195151 195152 195154 GTTGAAAACAAAAAA CACGCTCC GTT AAAGCGTG CTTAATGTGTTAGTT TERM 185 195491 - 195471 - T 71 -3.2 -5.56264 | opp_overlap 195472, overlap 195472 TTGAAATATAAAAAA GCCACCCT TTAGC AAGGTGGT TTTTATTTTGTCTAA TERM 186 195472 - 195490 + T 79 -4.5 -5.58522 | opp_overlap 195471 195472 TGAAATATAAAAAAG CCACCCT TTAGC AAGGTGG TTTTTATTTTGTCTA UU158 195946 - 195503 - | hypothetical protein UU159 196463 - 195915 - | hypothetical protein UU160 196896 - 196450 - | membrane lipoprotein UU161 197236 - 196901 - | hypothetical protein UU162 199139 - 197766 - | hypothetical protein TERM 187 198700 - 198719 + g 78 -4.4 -5.39721 | TAAATACCATCATCG TTAAAGTT AGCA AACTTTGA TTTTTTATATAATCC UU163 199921 - 199139 - | ATP/GTP-binding protein TERM 188 199273 - 199287 + g 71 -8.6 -3.11302 | overlap 199272 TTGGTGCAAATTTCA GCATTG TAG CAATGC GTTTTGGAATATTAC TERM 189 199535 - 199546 + g 75 -3 -5.56263 | ATCTGTTAAATGTTT GATA ATGC TATC TTTTTGTTTTGTCGT TERM 190 199956 - 199942 - R 100 -7.1 -5.8187 | opp_overlap 199942 TAGTTAACAAAAAAA GGGCA TTATT TGCCC TTTCTCCTTTCTTTG TERM 191 199942 - 199956 + r 76 -7.1 -4.23391 | opp_overlap 199942 TAGTTAACAAAAAAA GGGCA TTATT TGCCC TTTCTCCTTTCTTTG UU164 201164 - 199977 - | hypothetical protein TERM 192 201151 - 201163 + g 75 -4.1 -5.1925 | CTTTTTCAAGTGTTT TGGTT ATC AGCCA TTTTTTCAATTCTCC UU165 201506 - 201180 - | hypothetical protein UU165.2 201877 - 201509 - | hypothetical protein UU166 205384 - 202550 - | hypothetical protein UU167 205721 - 205362 - | hypothetical protein UU168 206725 - 205712 - | hypothetical protein TERM 193 206173 - 206192 + g 76 -3.5 -5.61881 | opp_overlap 206171 206173, overlap 206161 206160 CTTTTGTGCACAATA CGCCGTA GTTGTG TACGACG TTTTTGTTTTTAAAA UU169 208160 - 206715 - | ATP/GTP-binding protein TERM 194 207543 - 207561 + g 78 -6.8 -4.72029 | opp_overlap 207543 TTTTTTATCTACAAC GCTATATT CAT AATATGGC TTTTGTTGGATTGAG TERM 195 207766 - 207744 - G 74 -4.8 -5.00616 | CGCTTCTTCAAAAAA CGCAAAAACA TAA CGTGCTTGCG TTCACAAACGAAATC UU170 208960 - 208517 - | hypothetical protein TERM 196 209286 - 209296 + r 72 -2.6 -5.84011 | opp_overlap 209286 AGTATATTTATGAAT TATA TAT TATA TTTTTATTTTTTATT UU171 210003 - 209404 - | hypothetical protein UU172 210378 - 211877 + | MBA N-terminal paralog UU173 214004 - 211932 - | hypothetical protein TERM 197 213585 - 213575 - G 79 -4 -5.76949 | opp_overlap 213569 213564 213575 CAGGTTGAAAAAAAA TGAT TTT ATCA TTTTTATCAATTAAT TERM 198 214067 - 214045 - R 91 -5.7 -5.76633 | opp_overlap 214045 214048 TTATATATAAAAAAA TAATGTTCA ATAAA CGAACATTA TTTAAAAAAACTTTA UU174 214955 - 214080 - | hypothetical protein trpS 215982 - 214981 - | tryptophanyl-tRNA synthetase TERM 199 215261 - 215277 + g 76 -6.7 -4.51765 | ACTCCTGGTTGTAAT GTTAAAT CAT ATTTAAC TTTGTTTAAATTATC TERM 200 215295 - 215309 + g 88 -5.8 -5.43866 | overlap 215307 TGTTTAAATTATCTG TTAAAG CTC CTTTAA TTTTTTTAAAAATTA TERM 201 216347 - 216324 - g 70 -5.4 -4.63928 | opp_overlap 216317 ATATTACTTCAAAAA CTTTTTTAGA TTTA TCTACAAAAG AATTATTAAATTTAA TERM 202 216353 - 216383 + G 73 -8.6 -3.17714 | opp_overlap 216351 216350 216347 216353 216358, overlap 216358 TCTACAAAAGAATTA TTAAATTTAATTCA AAA TGATTTAAATTTAA TTCGTCGCCCTTTAA TERM 203 216383 - 216353 - g 73 -8.6 -3.14625 | opp_overlap 216353 216358, overlap 216351 216350 216347 216358 TCTACAAAAGAATTA TTAAATTTAATTCA AAA TGATTTAAATTTAA TTCGTCGCCCTTTAA UU176 216107 - 216493 + | hypothetical protein TERM 204 217192 - 217165 - g 79 -10.2 -3.06492 | opp_overlap 217165 217172, overlap 217172 217186 CTATTGATGGGAATA TCATTAATTTTA GCGA TAAAATTAATGA TATTAAAGTAGAAAC TERM 205 217165 - 217192 + G 79 -10.2 -3.05844 | opp_overlap 217165 217172 217186, overlap 217172 CTATTGATGGGAATA TCATTAATTTTA GCGA TAAAATTAATGA TATTAAAGTAGAAAC UU177 216483 - 217295 + | hypothetical protein UU178 217298 - 217678 + | hypothetical protein UU179 217759 - 217980 + | hypothetical protein UU180 218461 - 217982 - | hypothetical protein TERM 206 218075 - 218042 - G 77 -8.3 -3.48593 | opp_overlap 218044, overlap 218044 218070 TATTTGTTCACATAA CATGACTTTTGCTAA GCCA TGAGCAAAAGTCATT TTTGACATAGATAAA TERM 207 218044 - 218073 + g 100 -10.9 -4.62783 | opp_overlap 218042 218044 218070 TTTGTTCACATAACA TGACTTTTGCTAA GCCA TGAGCAAAAGTCA TTTTTGACATAGATA TERM 208 218073 - 218044 - G 86 -10.9 -3.31726 | opp_overlap 218044, overlap 218042 218070 TTTGTTCACATAACA TGACTTTTGCTAA GCCA TGAGCAAAAGTCA TTTTTGACATAGATA tpiA 218524 - 219240 + | triosephosphate isomerase TERM 209 219843 - 219833 - g 70 -5.4 -4.68424 | GAACGTACCCAAAAA GCAT TTA ATGC AATGTTTGTTAAGCA TERM 210 220619 - 220639 + G 73 -8.5 -3.14792 | overlap 220618 GTTAATGATGTTTGG TTTATTATC ACA GATAATAAA GTTATTTTAAATTCG pgm 219257 - 220765 + | phosphoglyceromutase TERM 211 220985 - 220997 + G 74 -6.3 -4.5493 | opp_overlap 220984 220985 ATATGCTTATAAAAT TGATC CTC GATCA TTATTTTATTTAAAT UU183 220812 - 221687 + | hypothetical protein eno 221790 - 223112 + | enolase TERM 212 223266 - 223248 - gf 73 -7.6 -3.81 | AGGACTGTACAATAA TTTAATTG AAC CAATTAAA GATAAACGTGTTTTT pfkA 223081 - 224046 + | 6-phosphofructokinase TERM 213 225303 - 225319 + G 70 -5.3 -4.59591 | opp_overlap 225303 TTAGTTTATGATATA TTAAAAT ATG ATTTTAA TTTTAATATTTTATT TERM 214 225454 - 225423 - g 77 -7.6 -4.20953 | opp_overlap 225424 225443, overlap 225420 TTAAAACAAGAAGAA TTATTAAAATCATT TAAT ATTGATTTTAATAA TCATGAATTTTTATT pyk 224058 - 225482 + | pyruvate kinase TERM 215 225720 - 225700 - g 71 -6.9 -3.84246 | opp_overlap 225700 225704 225711, overlap 225711 TTTTGAAGGACCAAA TCTACTTGA AAT TCAAGTTGA ATCTTTTAAACGCTT TERM 216 227179 - 227160 - g 72 -8 -3.30243 | opp_overlap 227146 227143 227159 227163, overlap 227163 ACTTAGTTGCTACAA CAAGTTAT ATTT ATAACTTG AATTATGAAATTGGT TERM 217 227958 - 227972 + G 75 -8.6 -3.37761 | opp_overlap 227958 AACAAGTAGTATCAA TTGCTG CAT CAGCAA TTCCATTTATTGAAA TERM 218 227972 - 227958 - g 73 -8.6 -3.2613 | opp_overlap 227958 AACAAGTAGTATCAA TTGCTG CAT CAGCAA TTCCATTTATTGAAA TERM 219 228076 - 228058 - g 77 -9.6 -3.06399 | TTTAATTAAACCATA TGCCCCTA TTG TAGGGACA GGTACAGAATTTAAA TERM 220 228183 - 228165 - g 93 -7.6 -5.1287 | TTGATAGTCAAAAAA TTATCATT AGA AATGATAA TGATAAATTAGATGA rpoB 225605 - 229909 + | DNA-directed RNA polymerase subunit beta TERM 221 231704 - 231683 - g 70 -2.3 -5.62288 | TTAACAAAAGAAAAA TTTCCACAA GTAA TTGAAGAAA TGATGGCTAAAGATC TERM 222 232508 - 232492 - g 70 -2.4 -5.55664 | CTATGACCAAAAAAA TAATAA TGGTG TTATTA AAGATACAATTGAAA rpoC 229931 - 233848 + | DNA-directed RNA polymerase subunit beta' TERM 223 233890 - 233916 + F 100 -10.3 -5.08878 | TAACTTTGATATTTA CGTAGATGTGT GCTAA ACACATTTACG TTTTATTTATATATT TERM 224 234200 - 234184 - g 72 -8.1 -3.3233 | overlap 234181 234182 GAAAAAAAACAATTA GAAAAAG TCA CTTTTTC AACATCTATTACCCC UU189 233971 - 234492 + | MBA N-terminal paralog TERM 225 234561 - 234508 - T 93 -10.8 -4.47163 | opp_overlap 234516 234521 234523 234548, overlap 234511 234523 AATTAAAATAAATAA TGATTAAATAAAAAATCTGATGGT TAACAG ACTATCAGATCTTTTATTTAATAA GAGTCTATTTAGCTT TERM 226 234558 - 234511 - T 91 -12.5 -3.16872 | opp_overlap 234516 234521 234523 234548, overlap 234508 234523 TAAAATAAATAATGA TTAAATAAAAAATCTGATGGT TAACAG ACTATCAGATCTTTTATTTAA TAAGAGTCTATTTAG TERM 227 234516 - 234553 + T 77 -8.7 -3.74251 | opp_overlap 234511 234508 234523, overlap 234521 234523 234548 TAAATAATGATTAAA TAAAAAATCTGATGGTT AACA GACTATCAGATCTTTTA TTTAATAAGAGTCTA TERM 228 234546 - 234523 - T 75 -3.9 -5.68438 | opp_overlap 234521 234516 234523, overlap 234511 234508 TGATTAAATAAAAAA TCTGATGGT TAACAG ACTATCAGA TCTTTTATTTAATAA TERM 229 234523 - 234546 + T 71 -6.8 -4.08958 | opp_overlap 234523 234511 234508, overlap 234521 234516 TGATTAAATAAAAAA TCTGATGGTT AACA GACTATCAGA TCTTTTATTTAATAA UU190 235216 - 234566 - | hypothetical protein UU191 235422 - 235285 - | hypothetical protein TERM 230 235817 - 235804 - g 73 -3.9 -5.42605 | opp_overlap 235804 235808, overlap 235808 TTAATAAAAATAAAA TTATC ATTA GATAA TGCTTTTAAAGGTTT TERM 231 236043 - 236014 - g 73 -3.7 -5.41359 | opp_overlap 236014 236036 AATGAAATTAAAAAA TCCAAATTAATGA ACTA TGATTCATTTGGA ATGTTGTGTTCACAA UU192 235567 - 236160 + | hypothetical protein prsA 236180 - 237172 + | phosphoribosylpyrophosphate synthetase UU194 237179 - 237718 + | hypothetical protein UU195 237722 - 238561 + | hypothetical protein TERM 232 238765 - 238802 + G 73 -8.7 -3.16039 | ATTTAAAAGTTCCAT TTGCTTTTTTCAATCCA GTTG TTGATTCAAAAAAGCAA TTAATGCAAATCATT UU196 238563 - 239789 + | recombination factor protein RarA TERM 233 239992 - 240020 + G 72 -7.5 -3.77196 | opp_overlap 239992 AAAATCCAACAAAAA GCTTTTGAAGAAA ACA TTTCTCCCAAAGC TTTGGTCGATCGTAA TERM 234 240020 - 239992 - g 100 -9.7 -5.17507 | opp_overlap 239992 AAAATCCAACAAAAA GCTTTTGAAGAAA ACA TTTCTCCCAAAGC TTTGGTCGATCGTAA TERM 235 240033 - 240043 + G 71 -2.6 -5.59564 | AGCTTTGGTCGATCG TAAT TCA ATTA TTTTTTTAAATTTAT metS 239809 - 241374 + | methionyl-tRNA synthetase TERM 236 241866 - 241842 - g 72 -8.1 -3.33711 | opp_overlap 241847, overlap 241847 TATTTATAAACTCAA TAAAACTAATC ATG AATTAGTTTTA ACAAAAGACAATATT TERM 237 241993 - 242012 + G 84 -5.7 -5.1925 | gap 1, opp_overlap 241993 241992 ACAGGTGGAGCAAAT GCCTCAGG GACAG CC-GAGGC TTTTTTGACTTCTAA UU198 241462 - 242634 + | hypothetical protein TERM 238 242694 - 242674 - g 70 -2 -5.62219 | overlap 242677 AACAGACTAAAAAAA TCATTTTT AACAA AAAAATAA AAGATAAACTAGCTA TERM 239 243366 - 243384 + G 72 -9 -2.62111 | opp_overlap 243364, overlap 243365 TTAAGTGATCAAGGT TACCAAAA CAT TTTTGGTA CTGGTTTTTTACAAA pstA 242634 - 244829 + | phosphate transport system permease TERM 240 245131 - 245119 - g 76 -6.3 -4.72631 | opp_overlap 245118 245119 ATGAATCGAACAAAA CATGT TCT ACATG ATTTAAATTTGGATA pstB 244834 - 245823 + | phosphate transport ATP-binding protein B UU201 245847 - 246503 + | hypothetical protein TERM 241 246521 - 246536 + F 85 -4.7 -6.04953 | opp_overlap 246521 AATCATTAGCAAAAA CTAGG CATTTA CCTAG TTTTTTTATTTATAT TERM 242 246536 - 246521 - f 74 -5.4 -4.7871 | opp_overlap 246521 AATCATTAGCAAAAA CTAGGC ATTT ACCTAG TTTTTTTATTTATAT UU202 246663 - 246887 + | hypothetical protein TERM 243 248716 - 248700 - g 78 -7.3 -4.39696 | opp_overlap 248692 248700 GGTGAAACTAATAAA GCAACTA ATG CAGTTGC TGATATTAGTTTAAT copA 246891 - 249020 + | copper-transporting P-type ATPase TERM 244 249014 - 249029 + T 71 -3.4 -5.40004 | TGAGGCTATGTTACA TAAATA ATTT TATTTA TTTTTTAATTTACTA TERM 245 249043 - 249097 + T 73 -9.3 -2.50113 | gap 2, opp_overlap 249042 249046 249059, overlap 249046 249059 TATTTTTTAATTTAC TAATTAAATAAAAAAACACTTGTTGTA TAT TA-AACAAGTGTTTTTGT-TTTAATTA ATTAATAAACTCATG TERM 246 249059 - 249082 + T 95 -6.2 -5.54338 | gap 1, opp_overlap 249059 249046 249042, overlap 249046 249043 AATTAAATAAAAAAA CACTTGTTGTA TAT TA-AACAAGTG TTTTTGTTTTAATTA TERM 247 249082 - 249059 - T 100 -6.2 -6.01187 | gap 1, opp_overlap 249046 249043 249059, overlap 249046 249042 AATTAAATAAAAAAA CACTTGTTGTA TAT TA-AACAAGTG TTTTTGTTTTAATTA TERM 248 249357 - 249332 - T 100 -7.8 -5.68023 | opp_overlap 249332 CTATAATTAAAAAAA CATTAGTTAA TTAAAT TTAACTAATG TTTTTTTATCCTCTT TERM 249 249332 - 249357 + T 100 -7.8 -5.70829 | opp_overlap 249332 CTATAATTAAAAAAA CATTAGTTAA TTAAAT TTAACTAATG TTTTTTTATCCTCTT rpsO 249632 - 249363 - | 30S ribosomal protein S15 rnc 250453 - 249743 - | ribonuclease III plsX 251438 - 250443 - | putative glycerol-3-phosphate acyltransferase PlsX TERM 250 250666 - 250682 + g 70 -2.3 -5.50925 | opp_overlap 250666, overlap 250667 TTTGACAATAAAGCA GCAAAAA GAT TTTTTGG TTTTTTATATTCATT TERM 251 251140 - 251123 - G 72 -3.3 -5.40464 | CATTATAAACAAAAA CAGCAGA ATTT CCAGCTG TTAACATTCCATCAG UU207 253137 - 251443 - | hypothetical protein TERM 252 252769 - 252780 + g 80 -4.4 -5.45802 | overlap 252759 AATAGGTGTAGAGAC GCTT GCAT AAGC TTTTTCTTTTGCACC TERM 253 252907 - 252888 - G 91 -10 -4.21812 | opp_overlap 252888 TTTGACTTAAAATAA CACCAGAG TTAC CTCTGGCG TTCATTAATAGACCA TERM 254 252888 - 252907 + g 72 -7.8 -3.39895 | opp_overlap 252888 TTTGACTTAAAATAA CACCAGAG TTAC CTCTGGCG TTCATTAATAGACCA UU208 253418 - 253152 - | hypothetical protein UU209 254161 - 253523 - | hypothetical protein rpmB 254259 - 254453 + | 50S ribosomal protein L28 TERM 255 254463 - 254521 + T 76 -6.5 -4.54026 | gap 1, opp_overlap 254464 254465 254481, overlap 254463 254465 254481 GCCTAGTGAACGAAA AT-GTTAAAAATAAAAAAATGTACAAAC CATT GCTTGTACATTTTTTTATTATTAACTGG TTATTTTATTTAAAG TERM 256 254463 - 254520 + T 81 -10.3 -3.31331 | opp_overlap 254464 254465 254481, overlap 254463 254465 254481 GCCTAGTGAACGAAA ATGTTAAAAATAAAAAAATGTACAAAC CATT GCTTGTACATTTTTTTATTATTAACTG GTTATTTTATTTAAA TERM 257 254519 - 254464 - T 100 -16 -4.43477 | opp_overlap 254463 254463 254465 254481, overlap 254465 254481 CCTAGTGAACGAAAA TGTTAAAAATAAAAAAATGTACAAAC CATT GCTTGTACATTTTTTTATTATTAACT GGTTATTTTATTTAA TERM 258 254465 - 254518 + T 100 -17.3 -3.20316 | opp_overlap 254464 254465 254481, overlap 254463 254463 254481 CTAGTGAACGAAAAT GTTAAAAATAAAAAAATGTACAAAC CATT GCTTGTACATTTTTTTATTATTAAC TGGTTATTTTATTTA TERM 259 254518 - 254465 - T 100 -19.5 -3.25604 | opp_overlap 254465 254463 254463 254481, overlap 254464 254481 CTAGTGAACGAAAAT GTTAAAAATAAAAAAATGTACAAAC CATT GCTTGTACATTTTTTTATTATTAAC TGGTTATTTTATTTA TERM 260 254502 - 254481 - T 100 -8.1 -6.20267 | opp_overlap 254465 254463 254463 254481, overlap 254465 254464 TTAAAAATAAAAAAA TGTACAAAC CATT GCTTGTACA TTTTTTTATTATTAA TERM 261 254481 - 254502 + T 100 -5.9 -5.95946 | opp_overlap 254481 254465 254464, overlap 254465 254463 254463 TTAAAAATAAAAAAA TGTACAAAC CATT GCTTGTACA TTTTTTTATTATTAA TERM 262 254874 - 254860 - T 100 -8.6 -6.09196 | opp_overlap 254847 254860 TTTAAAATAAAAAAA GAGGAA TAA TTCCTC TTTAATTATTATCTT TERM 263 254860 - 254874 + T 80 -8.6 -4.14175 | opp_overlap 254860, overlap 254847 TTTAAAATAAAAAAA GAGGAA TAA TTCCTC TTTAATTATTATCTT rpmA 255178 - 254876 - | 50S ribosomal protein L27 UU211 255492 - 255184 - | hypothetical protein rplU 255800 - 255498 - | 50S ribosomal protein L21 gmk 256118 - 256693 + | guanylate kinase UU214 256674 - 257684 + | hypothetical protein ptc1 257688 - 258431 + | protein phosphatase TERM 264 258835 - 258846 + G 75 -3 -5.58074 | TATTCGTCAGGTTGC CTTA GGTG TAAG TTTTTTTCATAGTTG TERM 265 259286 - 259269 - g 93 -8.5 -4.78572 | opp_overlap 259268 259272 259282, overlap 259282 CGTTAATTAATAAAA CAATACC AAAA GGTATTG ATAATATTTTAATGC pkn 258437 - 259597 + | serine/threonine kinase TERM 266 259680 - 259690 + G 78 -6.8 -4.59773 | opp_overlap 259679 259680 TCAGATAAAAGCAAT TCCC AAA GGGA TTTTTAAACATAACA UU217 259600 - 260511 + | ATP/GTP-binding protein TERM 267 261650 - 261615 - g 75 -9.1 -3.14132 | opp_overlap 261647 GTGTTGGTTTAGTAA CAGGTGCAATTGCTG GATTAG CAACAATTACTCCTG CAGCAGGTTATGTTC amt-1 260648 - 262180 + | ammonium transporter TERM 268 262215 - 262193 - f 73 -4.2 -5.43866 | opp_overlap 262195, overlap 262195 TAATTTTTAAAAAAA GACTAAAGCA AAA TACTTTAGTT TTTTTAATTAATAAA TERM 269 262195 - 262213 + F 79 -4.6 -5.65513 | opp_overlap 262193 262195 ATTTTTAAAAAAAGA CTAAAGCA AAA TACTTTAG TTTTTTTAATTAATA TERM 270 262213 - 262195 - f 76 -6.8 -4.35085 | opp_overlap 262195, overlap 262193 ATTTTTAAAAAAAGA CTAAAGCA AAA TACTTTAG TTTTTTTAATTAATA TERM 271 262252 - 262242 - f 75 -2.6 -6.01369 | opp_overlap 262242 TAAATAATAAAAAAA TAAA GAA TTTA TTAATTAACGTAATA TERM 272 263290 - 263306 + G 70 -8.7 -2.52543 | opp_overlap 263266 263265 ACAACAGTAGGTTTA GTGACTG GTG CAGTCGC TGGATTAGCAACAAT TERM 273 263834 - 263822 - g 85 -5.5 -5.40072 | overlap 263826 GTGGTTGTAAAAAAA GCAAC TTA GCTGC CAAGAAAAACCCTGT amt-2 262345 - 263910 + | ammonium transporter TERM 274 263935 - 263956 + F 82 -4.5 -5.73978 | opp_overlap 263935 263938 GTATTTCATAATTAA GAAGTTAAT TAAA ACTAACTTC TTTTTTATTTATAAT UU220 264020 - 265306 + | membrane lipoprotein fthS 265321 - 266886 + | formate-tetrahydrofolate ligase TERM 275 267605 - 267617 + G 86 -7.7 -4.73864 | CCCATTCATTACGTC GTAGC TTT GCTAC TTTTATGTTAATTAA xerC 267016 - 267768 + | integrase-recombinase protein TERM 276 267815 - 267789 - f 85 -4.6 -5.93252 | TGTAAAAATAAAAAA TAAAAATGTTAA AAA TCGACATTTTTA TGCTAAAAAGCATAG TERM 277 268076 - 268086 + G 77 -5.4 -4.91712 | TTACTAACAGCTTCA GCAA TTA TTGC TTTTTATACATTCCC xasA 268049 - 270328 + | amino acid antiporter TERM 278 270339 - 270375 + F 86 -5.3 -6.09196 | opp_overlap 270342 270351 ATTAAAAAACAAAAA TGAGTCTTAATACTTTT TTA AAAAGTGTTTTGACTTA TTTTTTTATTTTACA TERM 279 270563 - 270543 - g 82 -9.8 -3.54743 | opp_overlap 270542 270541, overlap 270537 GATTATTAATGACAA CGCCAATT TTATT AATTGGCG GATTATCAACATTGG TERM 280 270836 - 270821 - g 77 -4.8 -5.10154 | overlap 270834 ATTGAAAATCAAAAA TTAGTT TTAA AACTAA ATAATTTACAAGACG UU224 270506 - 271654 + | membrane lipoprotein UU225 271711 - 272028 + | membrane lipoprotein UU225.1 272143 - 272481 + | membrane lipoprotein TERM 281 272510 - 272492 - f 89 -4.6 -6.14618 | opp_overlap 272492 TATAAAAGAAAAAAA TGACTTTA TAT TGAAGTCA TTTTTTATTACCTTT TERM 282 272492 - 272510 + F 100 -6.8 -5.52096 | opp_overlap 272492 TATAAAAGAAAAAAA TGACTTTA TAT TGAAGTCA TTTTTTATTACCTTT TERM 283 273981 - 273996 + G 71 -4.8 -4.86731 | TGAACTATATCCATA TGAATT ATCT AATTCA TTTTATTTAGAAAAA UU226 272632 - 274209 + | membrane lipoprotein TERM 284 274618 - 274608 - g 77 -5.4 -5.03314 | GTTATTGCTAAAAAA GGAA ATA TTCC TGTAACAAAAATTTT infC 274434 - 274970 + | translation initiation factor IF-3 rpL35 274985 - 275179 + | ribosomal protein L35 rplT 275234 - 275596 + | 50S ribosomal protein L20 rpsJ 275815 - 276120 + | 30S ribosomal protein S10 rplC 276145 - 276846 + | 50S ribosomal protein L3 rplD 276857 - 277492 + | 50S ribosomal protein L4 rplW 277495 - 277812 + | 50S ribosomal protein L23 rplB 277866 - 278705 + | 50S ribosomal protein L2 rpS19 278726 - 278992 + | ribosomal protein S19 TERM 285 279506 - 279536 + G 77 -8.5 -3.61715 | opp_overlap 279506 AACGTTGATCCAGAA CTTTTAAAACGTG AACAA CAAGTTTTAAAAG TTGTTGAAAAAACTG TERM 286 279536 - 279506 - g 75 -8.5 -3.36175 | opp_overlap 279506 AACGTTGATCCAGAA CTTTTAAAACGTG AACAA CAAGTTTTAAAAG TTGTTGAAAAAACTG TERM 287 279748 - 279766 + G 72 -9 -2.64155 | opp_overlap 279746 279753, overlap 279745 TGATTTAGAATCAGT TGAAATTG GTG CAATTTCA TCAATTTGAAGAAAA rpL22 279014 - 279949 + | ribosomal protein L22 rpS3 279969 - 280742 + | ribosomal protein S3 rplP 280757 - 281173 + | 50S ribosomal protein L16 rpL29 281173 - 281400 + | ribosomal protein L29 rpsQ 281400 - 281654 + | 30S ribosomal protein S17 rplN 281674 - 282042 + | 50S ribosomal protein L14 rpL24 282057 - 282389 + | ribosomal protein L24 rplE 282406 - 282960 + | 50S ribosomal protein L5 rpsN 282964 - 283149 + | 30S ribosomal protein S14 rpsH 283160 - 283558 + | 30S ribosomal protein S8 rplF 283567 - 284115 + | 50S ribosomal protein L6 TERM 288 284267 - 284252 - g 82 -6.2 -4.9218 | overlap 284232 284231 284256 TAGTTATTACAAAAA CAAATG CACA CATTTG AGCACAATTAATTTG rplR 284134 - 284499 + | 50S ribosomal protein L18 rpsE 284517 - 285128 + | 30S ribosomal protein S5 TERM 289 285187 - 285175 - g 80 -4.1 -5.5208 | TTAGAATATAAAAAA GGTTC AAG AAACC ACAAAGAAAAACGTG rplO 285145 - 285591 + | 50S ribosomal protein L15 TERM 290 286132 - 286142 + G 76 -4 -5.58074 | overlap 286130 TTCACCATTATTTTA TGTA ACA TACA TTTTTTTAATGGTTG TERM 291 286785 - 286802 + G 79 -8.5 -3.75517 | opp_overlap 286788, overlap 286788 TTTATCGCGTGAATT GAATTGG TGCA CCAATTC TTGCTTTTCTAGCAT secY 285644 - 287059 + | preprotein translocase subunit SecY adk 287068 - 287709 + | adenylate kinase map 287734 - 288483 + | methionine aminopeptidase (map) TERM 292 288633 - 288649 + G 73 -6.7 -4.10161 | overlap 288613 ATCAGGTAAAATGCG TGTTAAT AAA ATTAACA TTTTACCAGGTGATA infA 288511 - 288735 + | translation initiation factor IF-1 rpL36 288759 - 288872 + | ribosomal protein L36 rpsM 288897 - 289295 + | 30S ribosomal protein S13 TERM 293 289506 - 289471 - g 93 -4.7 -6.08342 | opp_overlap 289479 289483 GAACAAAGAAAAAAA CTCCATATTCAGCAG GTATTG CTGCTGAAGCTGCAG CAAAAGCTGTGATTG TERM 294 289483 - 289515 + G 73 -9.1 -2.81725 | opp_overlap 289471, overlap 289479 AAACTCCATATTCAG CAGGTATTGCTGCTG AAG CTGCAGCAAAAGCTG TGATTGATATGGGAT rpS11 289317 - 289682 + | 30S ribosomal protein S11 rpoA 289719 - 290702 + | DNA-directed RNA polymerase subunit alpha TERM 295 290924 - 290894 - g 74 -4.6 -5.06414 | opp_overlap 290912 290913 TCTTGCTAAGAAAAA CACACTTGCTTCAC GTC GTGCAGCAGCTGCG ATTTTATTAGGAACA rplQ 290730 - 291089 + | 50S ribosomal protein L17 TERM 296 291470 - 291454 - g 70 -2.3 -5.5112 | GGGATTAATAAAAAA TAATGAA AAT TCCATCA CTTCTAAAGTTCAAA TERM 297 292014 - 292028 + G 71 -5 -4.75174 | ATCATTTTGATGTTC GATTTG ATA CAGATC TTTTTCAATTCAATA TERM 298 293037 - 293052 + G 83 -4.8 -5.52384 | AAAACAGATTAAGTT TAAATC CTTT GATTTA TTTTTTTCCTAAAAC UU259 291356 - 293221 + | hypothetical protein UU260 293228 - 294523 + | membrane lipoprotein UU261 294590 - 294997 + | hypothetical protein TERM 299 295425 - 295437 + G 70 -6.3 -4.15453 | opp_overlap 295425 295420 295418 CTAAAAAATACTAAA TTTGC AAA GCAAA TTTTAACATCAATTA TERM 300 295437 - 295425 - g 70 -6.3 -4.18668 | opp_overlap 295425, overlap 295420 295418 CTAAAAAATACTAAA TTTGC AAA GCAAA TTTTAACATCAATTA UU262 294987 - 295574 + | hypothetical protein UU263 297366 - 295582 - | membrane lipoprotein TERM 301 296093 - 296103 + g 72 -3.2 -5.33866 | GAAAGTTTTTGATTA GCAT TAC GTGC TTTTTTCTCAATTTC TERM 302 296124 - 296136 + g 70 -3.5 -5.26875 | opp_overlap 296130, overlap 296129 TCTCAATTTCGTTTG TTAAA TCT TTTAA TTTTTTAATTAAGAG TERM 303 296151 - 296163 + g 78 -4.1 -5.40072 | opp_overlap 296151, overlap 296129 ATTTTTTAATTAAGA GGTAG TAT TTACC TTTTTTTGAAAGAGA TERM 304 296640 - 296613 - G 71 -8.6 -2.81702 | opp_overlap 296610 296613 296637, overlap 296612 296610 296606 GTACTGAAGAAATAT TTTCATGAAGTT GATT AGCTTCATGAAA TAATTCCATAATTTC TERM 305 296613 - 296640 + g 82 -10.8 -2.7795 | opp_overlap 296613 296612 296610 296606, overlap 296610 296637 GTACTGAAGAAATAT TTTCATGAAGTT GATT AGCTTCATGAAA TAATTCCATAATTTC TERM 306 296794 - 296804 + g 79 -4 -5.80248 | ATAAAGACCATCGTA TGAT TCA ATCA TTTTTTTATATCTTA TERM 307 296880 - 296920 + g 83 -5 -5.61881 | TAGTTAAAATTTCTT CAATATTATTTTTGATAT GATCG ATATCATGAATAATTTTG TTTTTATTTTTAAAA TERM 308 297564 - 297543 - R 93 -8.9 -5.0133 | opp_overlap 297543 297539 TACCTTTTTAAAAAA CTAACTTTA TTAT TAAAGTTAG TTAGGTTTATTTTTA TERM 309 297543 - 297564 + r 78 -8.9 -3.47498 | opp_overlap 297543, overlap 297539 TACCTTTTTAAAAAA CTAACTTTA TTAT TAAAGTTAG TTAGGTTTATTTTTA pacL 300525 - 297577 - | cation-transporting P-type ATPase TERM 310 298056 - 298070 + g 72 -4.2 -4.98255 | opp_overlap 298056 ATGTTAAAGACGAAC CAGCCA TAA TCGCTG TTTTTATGGTTAAAA TERM 311 299633 - 299619 - G 81 -7.2 -4.55491 | TACCGAATGATAAAA CAATTG TTA CAATTG CCACAATTCCTTCAG TERM 312 300125 - 300143 + g 75 -7.6 -4.08689 | overlap 300141 CCCATTACAACTTGG TTAGAATT AAT AATTCTAA TTTGATTATTACGTA UU265 300712 - 301041 + | hypothetical protein UU266 301046 - 301672 + | GTPase EngB TERM 313 303280 - 303296 + G 70 -3.7 -5.11613 | TTGATAAATATGGAT TAGATGC TAT GCGTTTA TTTTTTGCATCATGT TERM 314 304217 - 304202 - g 86 -3.4 -6.01187 | AATTAAAGAAAAAAA TAAATT AATT AATTTA AAAAAAGAACACGCA valS 301653 - 304277 + | valyl-tRNA synthetase spoU-2 304282 - 304800 + | rRNA methylase UU269 304806 - 305480 + | hypothetical protein TERM 315 305612 - 305636 + F 100 -7.3 -5.76237 | opp_overlap 305612 TTAAAATTAAAAAAA CTTAATGTTAT AAA AAAACATTAAG TTTTTTCTTTGTATA TERM 316 305636 - 305612 - f 100 -7.3 -5.79588 | opp_overlap 305612 TTAAAATTAAAAAAA CTTAATGTTAT AAA AAAACATTAAG TTTTTTCTTTGTATA UU270 305728 - 306399 + | hypothetical protein TERM 317 307658 - 307648 - g 81 -2.6 -6.02546 | CTAAATTAAAAAAAA TATA TCT TATA AGCACTTTATTATTA UU271 306447 - 307820 + | hypothetical protein TERM 318 307799 - 307810 + G 78 -4.4 -5.28826 | AGTGGAGGATAGTGA TGCA AGAT TGCA TTTTTTGTAAAATTT TERM 319 308026 - 308039 + G 70 -5.3 -4.63107 | TTAGAAGAAGTTTTT CCTAA TGTT TTAGG TTTTAATTATTTAAT hit 307798 - 308256 + | HIT protein TERM 320 308810 - 308830 + G 76 -7.1 -4.43213 | opp_overlap 308791 308815, overlap 308815 AACACAATCGTTTTG TAAAATTAT TTA ATAATTTTA TTTTAGTGTATTGAA UU273 308266 - 309021 + | hypothetical protein hemN 310082 - 309018 - | coproporphyrinogen III oxidase TERM 321 310527 - 310513 - g 93 -2.8 -6.47325 | opp_overlap 310515, overlap 310515 AAAAAAGAAAAAAAA GATCGT TCA ACGATT CAATTATTATTTGGA TERM 322 310525 - 310515 - g 74 -5.4 -4.77908 | opp_overlap 310515, overlap 310513 AAAAGAAAAAAAAGA TCGT TCA ACGA TTCAATTATTATTTG TERM 323 310566 - 310555 - g 88 -5.8 -5.37865 | GGAACAATTAAAAAA CGCA AAAT TGCG AACTATTTAATTATT UU275 310489 - 311034 + | membrane lipoprotein UU276 311037 - 312128 + | nicotinate phosphoribosyltransferase rpsU 312204 - 312371 + | 30S ribosomal protein S21 TERM 324 312391 - 312418 + F 75 -4.1 -5.69793 | opp_overlap 312391 GAAACGCACATGAAT CCAACCATTAC TTGAAT GTTTTGGTTGG TTTTTTCTTTAATAT argS 312495 - 314147 + | arginyl-tRNA synthetase pgk 314150 - 315418 + | phosphoglycerate kinase celM 315422 - 316513 + | endo-1,4-beta-glucanase deoD 316587 - 317306 + | purine-nucleoside phosphorylase hupA 317402 - 317794 + | DNA-binding protein HU-alpha (HU-2) TERM 325 317845 - 317795 - f 85 -10.1 -3.72078 | opp_overlap 317799 317805 317810, overlap 317799 317810 TCAGAAAATAATTAA TTAATAATATGAAAACACGAGTT TTAAT AACTCGTGTTTTGTTATTATTTA AATAAGTATAATAAA TERM 326 317841 - 317799 - f 87 -10.9 -3.52762 | opp_overlap 317799 317805 317810, overlap 317795 317810 AAAATAATTAATTAA TAATATGAAAACACGAGTT TTAAT AACTCGTGTTTTGTTATTA TTTAAATAAGTATAA TERM 327 317799 - 317841 + F 90 -10.9 -3.67792 | opp_overlap 317795 317799 317810, overlap 317805 317810 AAAATAATTAATTAA TAATATGAAAACACGAGTT TTAAT AACTCGTGTTTTGTTATTA TTTAAATAAGTATAA TERM 328 317805 - 317835 + F 88 -9.9 -4.10744 | opp_overlap 317799 317795 317810, overlap 317799 317810 ATTAATTAATAATAT GAAAACACGAGTT TTAAT AACTCGTGTTTTG TTATTATTTAAATAA TERM 329 317810 - 317830 + F 95 -9.8 -5.04082 | opp_overlap 317810 317799 317795, overlap 317805 317799 TTAATAATATGAAAA CACGAGTT TTAAT AACTCGTG TTTTGTTATTATTTA TERM 330 317830 - 317810 - f 87 -9.8 -4.49937 | opp_overlap 317805 317799 317810, overlap 317799 317795 TTAATAATATGAAAA CACGAGTT TTAAT AACTCGTG TTTTGTTATTATTTA TERM 331 319375 - 319390 + G 79 -4 -5.75342 | TACAAAAGAACAATT TTTAGC TAAT GCTGAA TTTTTTTTAGAAGGC spoT/relA 317894 - 320050 + | ppGpp 3'-pyrophosphohydrolase TERM 332 320083 - 320069 - g 71 -2.9 -5.46276 | AACATATACAAAAAA CAAAA TTTAT TTTTG TAACTGGTGGTGTTT pyrG 320035 - 321663 + | CTP synthetase hisS 321667 - 322929 + | histidyl-tRNA synthetase TERM 333 324621 - 324601 - g 72 -9.1 -2.62263 | ACGGCGTTGATATGA TGTTAGACG CAC CATCTAACA TGAATGATGAAGATT aspS 322935 - 324671 + | aspartyl-tRNA synthetase UU287 324664 - 325269 + | hypothetical protein UU288 325346 - 325501 + | hypothetical protein TERM 334 325501 - 325482 - f 79 -4.4 -5.66868 | opp_overlap 325482 AATGAATTAAAAAAA TTATTCCT TTTG AAGAATAA TTATAGTAAAATAAG TERM 335 325715 - 325729 + G 71 -5 -4.85545 | opp_overlap 325715, overlap 325710 AGAAACTGTTCAAAT CGATTA TGA TGATCG TTTTGTTAGTTTAAT msrA 325542 - 326039 + | methionine sulfoxide reductase A TERM 336 326035 - 326070 + T 100 -10.6 -5.2189 | opp_overlap 326035 326043, overlap 326043 CTAAAAAAGAATTCA GATAAAAACCAGGCGT TTTT GCGTCTGGTTTTTATA TTTTTTAATCATTAA TERM 337 326062 - 326043 - T 73 -4.9 -5.00642 | opp_overlap 326035 326043, overlap 326035 GAATTCAGATAAAAA CCAGGCG TTTTTG CGTCTGG TTTTTATATTTTTTA TERM 338 326043 - 326062 + T 95 -7.8 -5.41787 | opp_overlap 326043 326035, overlap 326035 GAATTCAGATAAAAA CCAGGCGT TTTT GCGTCTGG TTTTTATATTTTTTA UU290 326665 - 326075 - | hypothetical protein TERM 339 326301 - 326289 - G 90 -7.7 -4.95155 | opp_overlap 326289, overlap 326293 CCTATAGCATAAAAA CCACT TTC AGTGG TTAAATCAACAATTA bsaA 327160 - 326672 - | glutathione peroxidase TERM 340 329099 - 329114 + G 70 -6.2 -4.08948 | opp_overlap 329097 329099 GCTTTAGCATCAACA CCATAT ATTG ATATGG TTATTTCTGGAATTC TERM 341 329737 - 329727 - g 74 -2.6 -5.71638 | overlap 329719 TAATAATTAAAAAAA TTTT ATC AAAA GGTACAAATTTAAAA TERM 342 330143 - 330128 - g 75 -3.4 -5.47846 | AACCAAAAAACAAAA TTAAAA AGCC TTTTAA GAATGAGTGTTGATG TERM 343 330613 - 330581 - g 74 -5.1 -4.83269 | ACAGTAGATCAAAAA CAAAAGATTAATAAT TTT ATCACTAATATTTTG CCAACAATACCTAAT TERM 344 331856 - 331845 - g 78 -3 -5.66684 | opp_overlap 331845 CAATTGATAAAAAAA CAAA TGAT TTTG CTTTTCAAATTTTGA UU292 327482 - 332974 + | hypothetical protein TERM 345 334501 - 334491 - g 70 -4 -5.1675 | CTACTTATTAAAAAA GTTT TAC AAAC ACAAACCTTAAATAA TERM 346 334551 - 334576 + G 74 -6.3 -4.51743 | opp_overlap 334546 334551 334555 334574 GTTGTAAAAATTAAC GAAACAATTAA AACA TTAATTGATTC TTTATTTGCTAATCA TERM 347 334700 - 334685 - g 74 -2.6 -5.63374 | overlap 334687 CGAAGATCAAAAAAA TAGTTT AATT AAACCA GTAGTTGAATTTATT UU293 333303 - 337646 + | hypothetical protein TERM 348 337656 - 337683 + F 91 -5.1 -6.14618 | opp_overlap 337656 AAATAATTATAAAAA TATTAGAGATT TTAAAC AATCTTTAATA TTTTTTTATTTTATA TERM 349 337856 - 337870 + F 74 -7.2 -4.12599 | GCACTTTTTTAGGGT TAGGAA TAA TTCCTA TTTTAGCAAGTTCTT TERM 350 338600 - 338614 + G 88 -5.8 -5.4505 | opp_overlap 338599 338613 TATAAAAAACGATAT TGATTT TTT AAATCA TTTTTTATTAAAAGA UU294 338037 - 338642 + | hypothetical protein TERM 351 338782 - 338808 + GF 79 -10.2 -2.8154 | opp_overlap 338781, overlap 338781 ACCCAGAGGCAAATT CGCGTTTAAAAG TTG CTATTGAACGCG CTTTAAATAATAATT UU295 338652 - 339362 + | hypothetical protein UU296 339329 - 340069 + | hypothetical protein UU297 340578 - 340066 - | hypothetical protein TERM 352 340790 - 340778 - g 70 -6.3 -4.03413 | overlap 340786 ACTTTTTTATATAAA GGTAA TAT TTACC AAGTAATAGAAAATT efp 340721 - 341287 + | elongation factor P UU299 341290 - 341592 + | hypothetical protein nusB 341595 - 341978 + | transcription termination factor UU301 341984 - 342688 + | hypothetical protein UU302 342715 - 343077 + | hypothetical protein UU303 343161 - 343661 + | hypothetical protein TERM 353 343704 - 343691 - f 73 -6.7 -4.30559 | opp_overlap 343691, overlap 343683 343701 AATAAAATCTCAAAA GTGGT CTAA ACCAC TTTTTTGTTTTATTT TERM 354 343691 - 343704 + F 100 -6.7 -5.95449 | opp_overlap 343683 343691 343701 AATAAAATCTCAAAA GTGGT CTAA ACCAC TTTTTTGTTTTATTT TERM 355 346023 - 346008 - f 72 -7.6 -3.62096 | opp_overlap 346007 GGGGAGCAGGCCAAA CCGAAT TTCG ATTCGG GGTTGTAGGACTACA TERM 356 348818 - 348842 + F 79 -3.6 -6.08342 | opp_overlap 348818 ATCGCTACGCTAGAA CCAACCTT GAAATTTAA GAGGTTGG TTTTTTTATTTATTA greA 348924 - 349394 + | transcription elongation factor TERM 357 350022 - 350040 + F 89 -6 -5.38326 | opp_overlap 350022 TAATATTTAACTAAA CTCCAC CCTATTA GTGGAG TTTTTCTTTAATTAA UU305 350065 - 350832 + | hypothetical protein nfo 350885 - 351796 + | endonuclease IV TERM 358 351857 - 351845 - T 100 -7.7 -7.14698 | opp_overlap 351845 AAAAAAAAAAAAAAA GGAGA AGT TCTCC TTTTTTTCGATCACA TERM 359 351845 - 351857 + T 95 -7.7 -5.47218 | opp_overlap 351845 AAAAAAAAAAAAAAA GGAGA AGT TCTCC TTTTTTTCGATCACA UU307 352980 - 352030 - | ATP/GTP-binding protein UU308 354128 - 352983 - | hypothetical protein TERM 360 353396 - 353417 + g 72 -3.1 -5.43329 | opp_overlap 353396, overlap 353397 AAATATTAAAATCAC GTTCAATAT TGTA ATATTGAAA TTTTGTTTTATTTTT TERM 361 353766 - 353778 + g 80 -4.9 -5.37865 | opp_overlap 353747 353764 AACATTATAATGATT TAATG AAA CATTA TTTTTTAATTCTTCA TERM 362 354339 - 354320 - H 71 -2.2 -5.76949 | opp_overlap 354332, overlap 354329 354332 TATGTTTAAAAAAAA TATACACA ATGA TGTTTATA AATTATAAACATTAA UU309 354465 - 355025 + | hypothetical protein rpS20 355347 - 355093 - | ribosomal protein S20 TERM 363 355453 - 355443 - R 87 -2.6 -6.5058 | opp_overlap 355450 ATAAATAAAAAAAAA TAAA TGT TTTA ACAGATTAAATTTAT TERM 364 355892 - 355938 + r 100 -14.2 -3.63608 | gap 1, opp_overlap 355904, overlap 355904 AACACGGCTTATTTT TACATGCAAAAACCCACTCTT ATAAAA AAGAGTGGGTTTTTGTAT-TA TGTTTGATTATATTT TERM 365 355904 - 355927 + r 100 -11.1 -5.18995 | opp_overlap 355904, overlap 355892 TTTTACATGCAAAAA CCCACTCTT ATAAAA AAGAGTGGG TTTTTGTATTATGTT TERM 366 355927 - 355904 - R 100 -11.1 -4.70659 | opp_overlap 355892 355904 TTTTACATGCAAAAA CCCACTCTT ATAAAA AAGAGTGGG TTTTTGTATTATGTT ard1 356376 - 355936 - | N-acetyltransferase complex, ribosomal protein-alanine-acetyltransferase subunit UU312 356929 - 356354 - | hypothetical protein TERM 367 356405 - 356432 + g 79 -10.2 -2.90212 | opp_overlap 356408, overlap 356408 ATCTAAGATATTAGT TAACTTAAAATT ATCA AATTTTAAGTTA TATATGAGATCATGA TERM 368 356408 - 356429 + g 70 -7.5 -3.59698 | opp_overlap 356408, overlap 356405 TAAGATATTAGTTAA CTTAAAATT ATCA AATTTTAAG TTATATATGAGATCA rluD 357821 - 356922 - | pseudouridine synthase (uracil hydrolase) TERM 369 357818 - 357829 + g 75 -3 -5.48825 | overlap 357827 AAGAATATAGTATTT TCAT TGCT ATGA TTTTTTTAAGTCATC lspA 358615 - 357824 - | hypothetical protein ppa 359160 - 358615 - | inorganic pyrophosphatase UU316 359326 - 359706 + | hypothetical protein TERM 370 359955 - 359992 + G 70 -6.5 -4.15698 | gap 1, opp_overlap 359961 TCTATCGTTATTTGC TAAAAAGCAAAG-CCTCT TTT ATAGGTCTTTGCCTTTTA TTGTTTGTGTCAATC TERM 371 359986 - 359961 - g 70 -5.5 -4.58395 | gap 1, opp_overlap 359955 GTTATTTGCTAAAAA GCAAAG-CCTCT TTT ATAGGTCTTTGC CTTTTATTGTTTGTG UU317 359915 - 364642 + | hypothetical protein TERM 372 364702 - 364729 + F 100 -13.6 -4.14627 | opp_overlap 364706, overlap 364706 AAGTAAAATGTGAAT GAAATGACGACC TTAG GGTTGTCATTTC TTATTTATATGAAAG TERM 373 364706 - 364725 + F 86 -8.6 -4.65458 | opp_overlap 364706, overlap 364702 AAAATGTGAATGAAA TGACGACC TTAG GGTTGTCA TTTCTTATTTATATG TERM 374 366014 - 365998 - g 73 -5.9 -4.56629 | opp_overlap 365998, overlap 365988 TAGAAGATGATAAAA TTGAACA AGA TGTCCAA TTAAATCACCCATTA nusA 364755 - 366131 + | transcription elongation factor NusA TERM 375 366343 - 366325 - g 72 -3.2 -5.43866 | CAATTTCTAAAAAAA CGTTTT ATGATTA AAAACG AAGAACAAGTTTATC UU319 366142 - 366393 + | hypothetical protein infB 366428 - 368272 + | translation initiation factor IF-2 rbfA 368280 - 368630 + | ribosome-binding factor A UU322 368578 - 369048 + | membrane lipoprotein TERM 376 369042 - 369084 + T 100 -9.7 -5.66338 | gap 2, opp_overlap 369042 369053, overlap 369042 TGCGACACACATATA TTA-TTAAAAAAGATAGG-GT CAT ACTCCTATCTTTTTTAATTAA TTTTTTATTGTATTT TERM 377 369083 - 369042 - T 84 -11.3 -3.08197 | gap 1, opp_overlap 369042 369042, overlap 369053 TGCGACACACATATA TTATTAAAAAAGATAGG-GT CAT ACTCCTATCTTTTTTAATTA ATTTTTTATTGTATT TERM 378 369042 - 369083 + T 93 -11.3 -3.96142 | gap 1, opp_overlap 369042 369053, overlap 369042 TGCGACACACATATA TTATTAAAAAAGATAGG-GT CAT ACTCCTATCTTTTTTAATTA ATTTTTTATTGTATT TERM 379 369072 - 369053 - T 81 -5.8 -5.20216 | gap 1, opp_overlap 369042 369042, overlap 369042 TATATTATTAAAAAA GATAGG-GT CAT ACTCCTATC TTTTTTAATTAATTT UU323 369823 - 369128 - | hypothetical protein TERM 380 369513 - 369530 + g 83 -3.5 -5.98675 | opp_overlap 369516 TTTTGAAAATTGAAT TGACAAT GAAA ATTGTTA TTTTTTATTTTTATA lepA 371635 - 369836 - | GTP-binding protein LepA TERM 381 371710 - 371729 + r 73 -6.5 -4.22283 | opp_overlap 371710, overlap 371705 AATAAAAATAAAAAA CAACTCT ATTTAA AGAGTTG TTTCATGTTTTTTTG TERM 382 371729 - 371710 - R 100 -6.5 -6.01725 | opp_overlap 371705 371710 AATAAAAATAAAAAA CAACTCT ATTTAA AGAGTTG TTTCATGTTTTTTTG UU325 372412 - 371753 - | hypothetical protein TERM 383 372114 - 372130 + g 74 -6.7 -4.21744 | TCTAATACTTTTTCT TCATATT TGT AATATGA TTTAGTTTGTTCAAT UU326 372558 - 372917 + | hypothetical protein TERM 384 373484 - 373472 - g 70 -3.5 -5.14563 | opp_overlap 373460 373472 TTTTTTATTAAAAAA TAAAT TCT ATTTA ATTGCTACTATTTTA TERM 385 373576 - 373588 + G 79 -6.3 -4.73613 | GTAATGAAGGTCATG GTTTG GTA CAAAC TTTTATTGATCATGC spoU-3 372921 - 373694 + | rRNA methylase TERM 386 374445 - 374428 - g 83 -3.5 -5.90981 | TTACATGAAAAAAAA TATAACA AAAA CGTTATA TCTAGCTCTTTAAAT UU328 373678 - 374622 + | hypothetical protein TERM 387 376031 - 376020 - g 73 -2.2 -5.64873 | TTTAAGAACAAAAAA TCCC TTTA GAGA CTTGTTTGGTTTTTA UU329 374779 - 376047 + | hypothetical protein TERM 388 376210 - 376196 - g 75 -7.2 -4.14013 | opp_overlap 376194 376196 TAAAACTTTTTAAAA CGATTA ATT TAATCG TGGTTTTTGCTGTTT UU330 376048 - 377031 + | hypothetical protein UU331 378062 - 377760 - | hypothetical protein udk 378714 - 378091 - | uridine kinase rpL32 378900 - 379073 + | ribosomal protein L32 UU334 379079 - 379339 + | hypothetical protein TERM 389 379340 - 379360 + F 100 -7.7 -6.32976 | opp_overlap 379343 ATTAAATTAAGTTAG TAACAACTT CAT GAGTTGTTA TTTTTTTATTTTTTT UU335 379425 - 381467 + | hypothetical protein UU336 381491 - 382798 + | hypothetical protein TERM 390 382842 - 382823 - f 100 -9.4 -5.5762 | opp_overlap 382823 AGGAAACACAAAAAA GGCTTTTA ATAA TAAAAGCC TTTTTATTTCAAAAT TERM 391 382823 - 382842 + F 100 -9.4 -5.27938 | opp_overlap 382823 AGGAAACACAAAAAA GGCTTTTA ATAA TAAAAGCC TTTTTATTTCAAAAT TERM 392 383453 - 383471 + G 74 -4.6 -4.94972 | AATTTTATTATTAGC TGTGTG AATAAAG CACACA TTTTTAATTCTAATG TERM 393 383628 - 383638 + G 79 -4 -5.63236 | opp_overlap 383628, overlap 383619 GTGGAATCGGTAAAT TAAC GAC GTTA TTTTTATTTTTGAAT folD 382856 - 383665 + | methylenetetrahydrofolate dehydrogenase TERM 394 384096 - 384086 - g 71 -2.6 -5.58209 | TGAAATTGAAAAAAA TAAT CAA ATTA ATATATGTAACAGCC UU338 383742 - 385628 + | hypothetical protein dnaK 385804 - 387615 + | heat shock protein 70 (hsp70) TERM 395 387623 - 387656 + F 93 -12 -3.56987 | opp_overlap 387620 387629, overlap 387626 387629 387651 AGAAATAATTAATTT TAATAACCAATGGT TTAAAT ACCATTGGTTATTG TTATATAATAATGTA TERM 396 387626 - 387653 + F 95 -11.5 -3.91332 | opp_overlap 387620 387629, overlap 387623 387629 387651 AATAATTAATTTTAA TAACCAATGGT TTAAAT ACCATTGGTTA TTGTTATATAATAAT TERM 397 387650 - 387629 - f 77 -8.8 -3.69338 | opp_overlap 387626 387623 387629, overlap 387620 AATTAATTTTAATAA CCAATGGT TTAAAT ACCATTGG TTATTGTTATATAAT TERM 398 387629 - 387650 + F 80 -8.8 -4.07466 | opp_overlap 387629 387620, overlap 387626 387623 AATTAATTTTAATAA CCAATGGT TTAAAT ACCATTGG TTATTGTTATATAAT UU340 387667 - 388833 + | hypothetical protein UU341 388870 - 389445 + | hypothetical protein cmk 389445 - 390119 + | cytidylate kinase UU343 390196 - 390483 + | hypothetical protein TERM 399 390470 - 390510 + F 71 -6.6 -4.02424 | gap 1, opp_overlap 390468 390466 390473 390476 390480 390484 390509, overlap 390468 390466 390474 390476 390480 390509 TTAATAAACTAGAGT TAAGTATTAACTAATTATT TTCA AATAATTAGTTAAT-CATA TTTATAATAATTAAT TERM 400 390507 - 390473 - f 71 -8.3 -3.18126 | gap 1, opp_overlap 390468 390466 390470 390474 390476 390480, overlap 390468 390466 390476 390480 390484 ATAAACTAGAGTTAA GTATTAACTAATTATT TTCA AATAATTAGTTAAT-C ATATTTATAATAATT TERM 401 390474 - 390508 + F 70 -6.9 -3.59935 | gap 1, opp_overlap 390468 390466 390473 390476 390480 390484, overlap 390468 390466 390470 390476 390480 TAAACTAGAGTTAAG T-ATTAACTAATTATT TTCA AATAATTAGTTAATCA TATTTATAATAATTA TERM 402 390505 - 390476 - f 84 -11.1 -2.77926 | opp_overlap 390468 390466 390474 390470 390476 390480, overlap 390468 390466 390473 390480 390484 AACTAGAGTTAAGTA TTAACTAATTATT TTCA AATAATTAGTTAA TCATATTTATAATAA TERM 403 390476 - 390505 + F 84 -11.1 -2.91255 | opp_overlap 390468 390466 390476 390473 390480 390484, overlap 390468 390466 390474 390470 390480 AACTAGAGTTAAGTA TTAACTAATTATT TTCA AATAATTAGTTAA TCATATTTATAATAA plsC 390535 - 391329 + | 1-acyl-sn-glycerol-3-phosphate acyltransferase UU345 391461 - 392345 + | hypothetical protein TERM 404 393111 - 393099 - g 71 -4.9 -4.75776 | AACTCAATCCAAAAA TAAAG ATG CTTTA TCAAAATTTGTTACA UU346 392338 - 393432 + | hypothetical protein TERM 405 393680 - 393660 - g 86 -6.9 -5.0925 | CTTCAAAATTAAAAA TTCCTGG TTTTCGT CCAGGAA AAGTTCCGGTTGAAG tig 393527 - 394876 + | FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) TERM 406 395467 - 395454 - g 70 -3.9 -5.10064 | TTCAAGACATAAAAA TATCA ATTT TGATA ATATGCACGCTTTAA TERM 407 396856 - 396836 - g 70 -7.7 -3.54144 | opp_overlap 396839, overlap 396839 ATAAAAAAGAAGAGA CAACAATTC CAG GAATTGTTA ATGGAATGGCTTATA TERM 408 396853 - 396839 - g 74 -7.2 -3.83881 | opp_overlap 396839, overlap 396836 AAAAAGAAGAGACAA CAATTC CAG GAATTG TTAATGGAATGGCTT lon 395023 - 397398 + | ATP-dependent protease TERM 409 397401 - 397443 + F 70 -7.5 -3.52539 | gap 1, opp_overlap 397403 397413, overlap 397403 397413 TGGAGAAAAATAAGA AAT-ATTAAAAAATAAACAC TGAA GTGTTTATTTTTTAATTATG TTATAATTAAAATTA TERM 410 397440 - 397403 - f 100 -11.7 -4.80417 | opp_overlap 397403 397401 397413, overlap 397413 GAGAAAAATAAGAAA TATTAAAAAATAAACAC TGAA GTGTTTATTTTTTAATT ATGTTATAATTAAAA TERM 411 397403 - 397441 + F 81 -10.1 -3.33214 | gap 1, opp_overlap 397403 397413, overlap 397401 397413 GAGAAAAATAAGAAA T-ATTAAAAAATAAACAC TGAA GTGTTTATTTTTTAATTA TGTTATAATTAAAAT TERM 412 397430 - 397413 - f 93 -7.1 -5.34055 | opp_overlap 397403 397401 397413, overlap 397403 AGAAATATTAAAAAA TAAACAC TGAA GTGTTTA TTTTTTAATTATGTT TERM 413 397413 - 397430 + F 93 -7.1 -5.3671 | opp_overlap 397413 397403, overlap 397403 397401 AGAAATATTAAAAAA TAAACAC TGAA GTGTTTA TTTTTTAATTATGTT rpoD 397484 - 398830 + | RNA polymerase sigma factor UU350 398814 - 399479 + | hypothetical protein UU351 399460 - 400248 + | hypothetical protein TERM 414 400282 - 400244 - T 100 -14.3 -3.0339 | opp_overlap 400244, overlap 400239 400235 400249 TAAAAATTAACTATA TTTAATTAAAAAAAGCC TTTAG GGCCTTTTTTAATTAAA TTTTTAAATCAAGAT TERM 415 400244 - 400282 + T 100 -12.8 -4.66163 | opp_overlap 400244 400239 400235 400249 TAAAAATTAACTATA TTTAATTAAAAAAAGCCT TTA GGGCCTTTTTTAATTAAA TTTTTAAATCAAGAT TERM 416 400277 - 400249 - T 77 -9.8 -3.16534 | opp_overlap 400244, overlap 400244 400239 400235 ATTAACTATATTTAA TTAAAAAAAGCC TTTAG GGCCTTTTTTAA TTAAATTTTTAAATC UU352 400607 - 400278 - | hypothetical protein TERM 417 400722 - 400740 + r 81 -7.6 -4.59293 | opp_overlap 400722 400721 TTTTTTATATAAAAT TTTAGAAA TTT TTTCTAAA TTTATTTAATATTTG UU353 401748 - 400834 - | membrane lipoprotein TERM 418 401008 - 401024 + g 70 -3.8 -5.17353 | ATCTTGTTTAATTAC TTTTTG TAATT CAAAAA TTTTTTCATCACTAT truB 401965 - 402648 + | tRNA pseudouridine 55 synthase ribF 402614 - 403465 + | riboflavin kinase/FAD synthetase UU356 403539 - 405275 + | ATP/GTP-binding protein TERM 419 406040 - 406059 + G 82 -9.4 -3.57263 | AAAATTATGCAACGC GATTTTGC TTTG GCAAAATC TTTAGGAATCAAAGT TERM 420 406125 - 406109 - g 77 -9.5 -3.05343 | opp_overlap 406110 406113 GTGACAGTTTTAACA GCAATTG TAA CAATTGC AACTGTTAATATTAC fecD 405290 - 406360 + | citrate-dependent iron transport, membrane-bound protein TERM 421 406511 - 406525 + G 74 -2.8 -5.73339 | CAGCTTGAGTTATTA GTATTG TTA CAATTC TTTTTTTATCGTTAT fatC-2 406366 - 407469 + | ferrichrome ABC transporter TERM 422 407482 - 407507 + F 100 -9.2 -7.14698 | TAAGCACAATCTTAG TAGTGAACAA GCCATA TTGTTCACTA TTTTTTTTTTTTTTT TERM 423 408872 - 408888 + G 71 -6.7 -3.90588 | opp_overlap 408871 408874 GTTGATAAAGTAATT TATTCAT ATA ATGAATA TTTAATTAAAGGATA ABCsbp-5 407618 - 409252 + | putative ABC substrate-binding protein - iron TERM 424 410599 - 410615 + G 71 -6.7 -3.90588 | opp_overlap 410598 410601 GTTGATAAAGTAATT TATTCAT ATA ATGAATA TTTAATTAAAGGATA ABCsbp-6 409345 - 410979 + | putative ABC substrate-binding protein - iron TERM 425 411096 - 411072 - f 81 -7.4 -4.66609 | GAGTTTATCTAAAAA TTTAATTCTT ACAAA AAGAATTAAA GTAGAATATATATTA TERM 426 411574 - 411589 + G 77 -4.8 -5.13722 | overlap 411582 GTTAGTTGTTGGTGA TGATTT ACTA AAATCA TTTTATTTTGATACA UU361 411137 - 411661 + | membrane lipoprotein TERM 427 411663 - 411716 + T 100 -15.9 -3.93148 | opp_overlap 411674 411680, overlap 411666 411680 TCAAAATGCTTTAGT TTGTTAATAAATAAAAACCTCTTTT TAAA GAAGGAGGTTTTTATTTATTAATGA TTATTCCTTTGATTG TERM 428 411666 - 411713 + T 100 -17.6 -3.01134 | opp_overlap 411674 411680, overlap 411663 411680 AAATGCTTTAGTTTG TTAATAAATAAAAACCTCTTTT TAAA GAAGGAGGTTTTTATTTATTAA TGATTATTCCTTTGA TERM 429 411705 - 411674 - T 78 -7.5 -4.1552 | opp_overlap 411666 411663 411680, overlap 411680 TAGTTTGTTAATAAA TAAAAACCTCTTT TTAAAG AAGGAGGTTTTTA TTTATTAATGATTAT TERM 430 411695 - 411680 - T 73 -4 -5.47159 | opp_overlap 411666 411663 411680, overlap 411674 GTTAATAAATAAAAA CCTCTT TTTA AAGAAG GAGGTTTTTATTTAT TERM 431 411680 - 411699 + T 79 -5 -5.48514 | opp_overlap 411680 411674, overlap 411666 411663 GTTAATAAATAAAAA CCTCTTTT TAAA GAAGGAGG TTTTTATTTATTAAT gapN 413130 - 411703 - | NADP-dependent glyceraldehyde-3-phosphate dehydrogenase asnA 414151 - 413162 - | asparagine synthetase AsnA TERM 432 413992 - 414013 + g 79 -10.3 -2.89447 | overlap 413991 413988 CTGCTTTTTGTTTAT GGTCTAAAT GATC ATTTAGACC TGATTGTCCTTCAAC TERM 433 414063 - 414089 + g 71 -4.6 -4.84527 | opp_overlap 414063 414064, overlap 414080 CGTGAAAGATTTAAA TTTTTTGCAAAA TGT TTTTGAAAAGAA TTTTTAATCTCTACA psgA 414785 - 414129 - | phosphatidylglycerophosphate synthase TERM 434 414408 - 414395 - G 70 -3.9 -5.16071 | opp_overlap 414395 AACCATCAATAAAAA TATCT CGTA AGATA TTAATAATTGTTAAA asnC 416130 - 414766 - | asparaginyl-tRNA synthetase TERM 435 416210 - 416182 - R 72 -2.6 -5.76237 | gap 1 TATATAAATAAAAAA GCAAAACATCATT GATT AATAA-GTTTCGC TTTAAATTAGTTTTT UU366 416859 - 416224 - | hypothetical protein UU367 418510 - 416987 - | hypothetical protein TERM 436 417471 - 417482 + g 72 -3 -5.35222 | TGATCTAATTTTTTA TAGT GAGC ACTA TTTTTTGTACCTTTT deoA 418752 - 420053 + | thymidine phosphorylase TERM 437 421672 - 421649 - g 74 -5.4 -4.79223 | opp_overlap 421649 421647 421652, overlap 421652 TTATATTATTAAAAA TGATCAACAA TTTT TTGTTGATGA TGTTTTTAAGGCACC alaS 420084 - 422804 + | alanyl-tRNA synthetase UU370 422797 - 423240 + | hypothetical protein TERM 438 424149 - 424136 - g 78 -6.7 -4.64595 | opp_overlap 424135 424136 AAACAAAGAAAATAA GCGAT TTAG ATCGC ATTGCTGATACTAAT TERM 439 425356 - 425366 + G 71 -2.6 -5.48054 | opp_overlap 425356, overlap 425346 GTTATTAATTATGAA TTAT TAG ATAA TTTTTTAATTTTACT leuS 423256 - 425676 + | leucyl-tRNA synthetase tnp-1 426493 - 425870 - | integrase-recombinase protein TERM 440 426416 - 426434 + g 82 -6.8 -4.7908 | ATTGGCTAAGTTTTT GAATGTTG CAT TAACATTC TTTATTTCTCTTTTT TERM 441 426590 - 426604 + r 77 -5.8 -4.95618 | opp_overlap 426590 TTCCTTTGCATTCAA TAAAAG CCT CTTTTA TTTGTTTTTCATATT UU373 426817 - 426713 - | hypothetical protein UU374 427114 - 426887 - | hypothetical protein TERM 442 427279 - 427260 - R 100 -9.4 -5.77677 | opp_overlap 427260 TAAAATAATAAAAAA TAGCTCAA TTTT TTGAGCTA TTTAATTTAAATTTT TERM 443 427260 - 427279 + r 84 -9.4 -4.13183 | opp_overlap 427260 TAAAATAATAAAAAA TAGCTCAA TTTT TTGAGCTA TTTAATTTAAATTTT MBA 428560 - 427313 - | multiple banded antigen TERM 444 429183 - 429224 + r 75 -6.1 -4.67478 | opp_overlap 429189 429197, overlap 429185 TAGAATTTGAATTTT AATAAATAAAAAAAGCCCA TTTT TGAGCTATTTTTATTTATA TTATTTTTGTGTTTC TERM 445 429185 - 429222 + r 79 -8.7 -3.90582 | opp_overlap 429189 429197, overlap 429183 GAATTTGAATTTTAA TAAATAAAAAAAGCCCA TTTT TGAGCTATTTTTATTTA TATTATTTTTGTGTT TERM 446 429218 - 429189 - R 76 -7.3 -4.20918 | opp_overlap 429185 429183, overlap 429197 TTGAATTTTAATAAA TAAAAAAAGCCCA TTTT TGAGCTATTTTTA TTTATATTATTTTTG TERM 447 429210 - 429197 - R 85 -4.5 -6.08342 | opp_overlap 429185 429183, overlap 429189 TAATAAATAAAAAAA GCCCA TTTT TGAGC TATTTTTATTTATAT UU376 429953 - 429225 - | hypothetical protein TERM 448 430017 - 430029 + H 70 -4.9 -4.84914 | opp_overlap 430017 TATATTTTAAAACAT TTTTG AAA CAAAA TTTTGTTATATAAAT TERM 449 430474 - 430460 - g 70 -3.6 -5.20783 | ATTTAAATACAAAAA TAGAAT ATA ACTCTA ATTTAAATTCATTAA TERM 450 430505 - 430483 - g 76 -9.4 -2.85621 | opp_overlap 430483, overlap 430482 AACTCTAATTTAAAT TCATTAATTT TAA AAATTAATGA TAAATTAATTTATGA TERM 451 430483 - 430505 + G 75 -9.4 -2.64878 | opp_overlap 430483 430482 AACTCTAATTTAAAT TCATTAATTT TAA AAATTAATGA TAAATTAATTTATGA TERM 452 430757 - 430716 - g 91 -10 -4.3129 | opp_overlap 430716 TAGTCAGCAGCAAAA TTTTTATAATAATCAAAA GGCAAA TTTTAATTATTATAAAAA TCCTTCAAATAAAAC TERM 453 432698 - 432688 - g 70 -4 -5.15634 | CAGCGCATTAAAAAA GAAT TAA ATTC AATTATTAAACATGG polC 430144 - 434472 + | DNA polymerase III PolC UU378 434587 - 436227 + | membrane lipoprotein TERM 454 436262 - 436306 + T 80 -7.6 -4.39724 | gap 1, opp_overlap 436262 AAGATTATAATACAA TAAAAAATCCGTC-TTATTAT GTTT ATAACAAAGATGGATTTTTTA TTATTTATTTAATTT TERM 455 436306 - 436262 - T 73 -7.6 -3.79482 | gap 1, opp_overlap 436262 AAGATTATAATACAA TAAAAAATCCGTCTT-ATTAT GTTT ATAACAAAGATGGATTTTTTA TTATTTATTTAATTT UU379 436858 - 436307 - | hypothetical protein UU379.1 437111 - 436833 - | hypothetical protein UU380 437617 - 437111 - | hypothetical protein TERM 456 437533 - 437517 - G 70 -8.1 -3.26531 | opp_overlap 437517, overlap 437515 GCATCAAGATTAACA CAAACAA AAT TTGTTTG TTTTTGAAAAGCTTC TERM 457 437517 - 437533 + g 86 -8.1 -4.58283 | opp_overlap 437517 437515 GCATCAAGATTAACA CAAACAA AAT TTGTTTG TTTTTGAAAAGCTTC TERM 458 437534 - 437553 + g 74 -6.6 -4.42974 | opp_overlap 437515 AACAAAATTTGTTTG TTTTTGAA AAGC TTCAAAAA TTTGTTGTGTATGAA uvrC 439539 - 437785 - | excinuclease ABC subunit C TERM 459 438774 - 438790 + g 70 -2.4 -5.52384 | opp_overlap 438774 CATAATTAAAAATTA TAATTA CTAAA TAATTA TTTTTTTCATAAAAA TERM 460 439576 - 439560 - R 74 -8.1 -3.75863 | overlap 439551 AAAACTTTTATCAAA TAAATCC TGG GGATTTA AGGCGTTAATAATTA gpsA 440513 - 439539 - | NAD+ dependent glycerol-3-phosphate dehydrogenase engA 441849 - 440521 - | GTP-binding protein EngA UU384 441985 - 443082 + | membrane lipoprotein TERM 461 443090 - 443077 - f 75 -3.9 -5.69023 | opp_overlap 443077 AAAATATTAAAAAAA GTATA AGAG TATAC TATTTTTCAAATTCG UU385 443158 - 443595 + | hypothetical protein UU386 443585 - 444511 + | hypothetical protein TERM 462 445357 - 445397 + G 76 -6.5 -4.59081 | opp_overlap 445357, overlap 445348 445388 TGCGGATATTGAAAA TACTTTTTTAAAAATTTTT AAA GAACATTTTGAAAAAAGTA TTTTATCTCAATTTG UU387 444530 - 445711 + | hypothetical protein TERM 463 445739 - 445766 + F 84 -7.2 -4.96762 | opp_overlap 445746, overlap 445746 AAGTATACAATTATT AAAAAAACTCAT TTTT ATGAGTTTTTTG TTTTTATAATATATG TERM 464 445746 - 445759 + F 86 -5.3 -5.98675 | opp_overlap 445746, overlap 445739 CAATTATTAAAAAAA CTCAT TTTT ATGAG TTTTTTGTTTTTATA TERM 465 445759 - 445746 - f 82 -5.3 -5.58074 | opp_overlap 445739 445746 CAATTATTAAAAAAA CTCAT TTTT ATGAG TTTTTTGTTTTTATA TERM 466 446052 - 446087 + G 82 -6.4 -5.03314 | overlap 446053 TGATTGTATTATGCT ATTTGAACAACAAT TAAATGCT ATTGTTGTTCAAAA TTTTTTAAAGATCAA TERM 467 446053 - 446086 + G 84 -9.9 -3.61506 | overlap 446052 GATTGTATTATGCTA TTTGAACAACAAT TAAATGCT ATTGTTGTTCAAA ATTTTTTAAAGATCA UU388 445807 - 446682 + | hypothetical protein TERM 468 448546 - 448563 + G 73 -7.1 -4.13343 | opp_overlap 448541 448549 TTATACAAACTTTAA TCATCTT TTAA AAGATGA TTTTAAAAAATTTAT TERM 469 448834 - 448853 + G 82 -8 -4.34285 | opp_overlap 448832 448834, overlap 448831 CAAACAACCAATAGA GATTTTCA ATGT TGAAAATC TTGTTTATTTAAATA TERM 470 448853 - 448834 - g 70 -8 -3.24858 | opp_overlap 448834 448831, overlap 448832 CAAACAACCAATAGA GATTTTCA ATGT TGAAAATC TTGTTTATTTAAATA UU389 446687 - 450541 + | ATP/GTP-binding protein UU390 450602 - 451417 + | hypothetical protein TERM 471 451441 - 451424 - f 79 -8.5 -3.92485 | opp_overlap 451424, overlap 451419 AGAGTATAAATATAA CAGGTTT GTTT AAACCTG TTTTTTTATGACAAT TERM 472 451424 - 451441 + F 100 -8.5 -5.61596 | opp_overlap 451419 451424 AGAGTATAAATATAA CAGGTTT GTTT AAACCTG TTTTTTTATGACAAT TERM 473 452549 - 452515 - g 77 -5.2 -5.05782 | opp_overlap 452524 ATTTACGGCAAAAAA TTGAAAGAATTCAACA TGA TATTGAATTTTATCAA TCTGAGGGTAAGTAT TERM 474 453606 - 453584 - g 80 -5 -5.31275 | opp_overlap 453590 TCGTATTACAAAAAA CATAAATTAT AAA ATAAATTATG ATCGTGAACTAGATC clpB 451524 - 453638 + | ATP-dependent serine proteinase - heat shock protein TERM 475 455412 - 455376 - g 85 -5.3 -5.32565 | GAATTAATGAAAAAA GTAGTTAATAACAAAAC TTT ATATCGTTACCAACTAC AAAAAAGTAATAATT UU392 453792 - 455576 + | hypothetical protein acpS 455953 - 455606 - | holo-acyl carrier protein synthase UU394 456257 - 455958 - | hypothetical protein TERM 476 456201 - 456215 + g 100 -5.8 -5.98675 | opp_overlap 456200 456201 AGGATCGTAACCAAC TTTGTT AGC AACAAA TTTTTTATTTTTATA UU395 456589 - 456308 - | hypothetical protein UU396 456869 - 456591 - | hypothetical protein rnhB 457869 - 456919 - | ribonuclease HII TERM 477 457890 - 457908 + H 72 -7.6 -3.6292 | ACCTTTTATTAATGT CTTATAAT AAA ATTATAAG TTTAAACGTATTTAT TERM 478 458310 - 458324 + G 90 -5.8 -5.54894 | overlap 458313 TCATAACAAACTTGA TCTTTT ACA AAAAGA TTTTTTTGATAAATT UU398 457969 - 458574 + | hypothetical protein TERM 479 458598 - 458652 + T 93 -11.2 -3.79765 | opp_overlap 458612, overlap 458612 ATAATTAAGATACAG TTGCATTATAAAAACCCTTGGATT CATAAAT AATCTAAGGGTTTTTATAATTTGA TATTCTTTTGTATGT TERM 480 458638 - 458612 - T 70 -5.2 -4.91109 | opp_overlap 458612 458598 GTTGCATTATAAAAA CCCTTGGATT CATAAAT AATCTAAGGG TTTTTATAATTTGAT TERM 481 458612 - 458638 + T 86 -7.4 -5.05228 | opp_overlap 458612, overlap 458598 GTTGCATTATAAAAA CCCTTGGATT CATAAAT AATCTAAGGG TTTTTATAATTTGAT hmuU-2 459713 - 458667 - | hemin permease fatD-2 460735 - 459716 - | ferrichrome ABC transporter (permease) TERM 482 459990 - 459976 - G 77 -8.6 -3.56836 | AAATGATGCTTGAAA CAGTTG CGA CAACTG CAAAAAAAGCTGTTA TERM 483 460280 - 460292 + g 72 -6.3 -4.19735 | opp_overlap 460279 AATTGGTTTAAAACT TGCTT CTA AAGCA TTTCCTTTTACCAAG ABCsbp-7 462251 - 460746 - | putative ABC substrate-binding protein - iron trmU 463432 - 462275 - | tRNA-(5-methylaminomethyl-2-thiouridylate) methyltransferase TERM 484 463581 - 463608 + G 78 -4.2 -5.39755 | gap 1, overlap 463584 463585 TTTCTTCATTAATTG GGATTAG-TGCGA TTG TCGCAACTAGTAC TTTTTTGTCATTATC UU403 463541 - 464437 + | hypothetical protein TERM 485 464518 - 464498 - T 79 -7.1 -4.70659 | opp_overlap 464491 464500 GTTCATATTTAAAAA TATTTTTAA TAA TTAAAAATA AATTCAAAAAAAATA TERM 486 464575 - 464543 - T 100 -10.9 -5.25799 | opp_overlap 464543 AAAATAATATAAAAA TAAGTTTAATGTTAT CAA AAAACATTAAACTTA TTTTTTAGTTGACTT TERM 487 464543 - 464575 + T 100 -10.9 -5.29385 | opp_overlap 464543 AAAATAATATAAAAA TAAGTTTAATGTTAT CAA AAAACATTAAACTTA TTTTTTAGTTGACTT tnp-2 465474 - 464668 - | integrase-recombinase protein UU405 466307 - 465534 - | hypothetical protein UU405.1 466522 - 467718 + | hypothetical protein TERM 488 467800 - 467772 - T 81 -4 -6.02919 | gap 1, opp_overlap 467772 GCATAAATAAAAAAA GTGAA-AGCAATT TATA AAATGCTATTCAC TTTTTTTATTTTATT TERM 489 467772 - 467800 + T 84 -4 -6.17669 | gap 1, opp_overlap 467772 GCATAAATAAAAAAA GTGAA-AGCAATT TATA AAATGCTATTCAC TTTTTTTATTTTATT grpE 468467 - 467811 - | heat shock protein dnaJ 469594 - 468467 - | heat shock protein TERM 490 469685 - 469659 - R 100 -8.2 -5.4593 | CTAAAATAATAAAAA TTAGCAATCA TCATATC TGATTGCTAA AAATAATCATAATTA UU408 470171 - 469722 - | hypothetical protein UU409 471072 - 470152 - | lipoprotein TERM 491 471154 - 471182 + H 79 -8.3 -4.20084 | opp_overlap 471154, overlap 471157 TTAATAATTATATTA CAACATTATTACG AGT CTTAGTAATGTTG TTTTAAGTAAATAAT TERM 492 471569 - 471552 - g 70 -2.1 -5.47218 | CCTTATCTAAAAAAA TTAAATT ATCT AATCTAA GTGTTAATGAACGTC TERM 493 472784 - 472773 - g 72 -3 -5.3104 | GTATGAAAAATAAAA CTTT TTAT AAAG AAAAAGACATTATGG ileS 471224 - 473926 + | isoleucyl-tRNA synthetase TERM 494 474182 - 474195 + G 79 -8.1 -3.98913 | GCTTACACTGCAATG CCTGG TTTG CCAGG TTGTTTACATGTAGG gcp 473930 - 474892 + | O-sialoglycoprotein endopeptidase metK 474916 - 476046 + | S-adenosylmethionine synthetase TERM 495 476082 - 476057 - T 81 -5.4 -5.25805 | opp_overlap 476057 AATAAATTTAAAAAA CGATACGCAC AATAAA GGGCATATCG TTTTTTTAATAAATA TERM 496 476057 - 476082 + T 71 -3.2 -5.53991 | opp_overlap 476057 AATAAATTTAAAAAA CGATACGCAC AATAAA GGGCATATCG TTTTTTTAATAAATA fpg 477076 - 476249 - | formamidopyrimidine-DNA glycosylase TERM 497 476671 - 476707 + g 85 -10.6 -3.22774 | gap 1, opp_overlap 476671 476670, overlap 476674 CTAGCGGATCTAAAG CAATCTTTTTTA-ATTC TTTT GAATCTAAAAAAGATTG TTGCTCATAAATGTG TERM 498 476707 - 476671 - G 82 -10.6 -2.79327 | gap 1, opp_overlap 476671 476674, overlap 476670 CTAGCGGATCTAAAG CAATCTTTTTTA-ATTC TTTT GAATCTAAAAAAGATTG TTGCTCATAAATGTG TERM 499 477105 - 477142 + r 70 -5.3 -4.86385 | gap 1, opp_overlap 477105 477118 TTATATAGCAGATTA TAATATGGATAAATTATT TAT AATAATTT-TGCATATTA TTTATTTTTAAAGAT polA 477987 - 477118 - | DNA polymerase I dnaE 480900 - 477991 - | DNA polymerase III DnaE TERM 500 478635 - 478661 + g 71 -4.7 -4.89966 | gap 1, overlap 478638 CATCACCAAAACCCT TAATT-GTTTTG AAAC CAAAACGAATTA TTTGTTTTTGAGTAT TERM 501 478981 - 478997 + g 85 -5.3 -5.38348 | ATTGATAAAATCATC TTTTAAT TGG ATTAAAA TTTTTTCATCTTTTT UU416 481112 - 480900 - | hypothetical protein UU417 482162 - 481197 - | hypothetical protein TERM 502 481594 - 481608 + g 73 -5.8 -4.58395 | TGTTGATAAATTTGA TAATGT TTG ACATTA TTTTTAAAAAATCAA thiI 483352 - 482180 - | thiamin biosynthesis protein UU419 484196 - 483330 - | hypothetical protein TERM 503 484108 - 484118 + g 85 -5.4 -5.31877 | opp_overlap 484105 484108 ATTTTTGCAAAATAT CGTT GAT AACG TTTTTTATAATCGCT UU420 484311 - 485057 + | hypothetical protein hrcA 485044 - 486117 + | heat-inducible transcription repressor TERM 504 486205 - 486194 - g 75 -3 -5.50925 | opp_overlap 486194 AATGAATATAAAAAA GAAT TAGA ATTC TTAATTGCAACAATT TERM 505 486380 - 486396 + G 70 -2.3 -5.4833 | opp_overlap 486380 486375 486381, overlap 486381 AAAGAATTAATAAAA GTACTAA ATA TTAGTAA TTTTTTATTGAATAA UU422 486107 - 486610 + | hypothetical protein UU423 486622 - 487332 + | hypothetical protein UU424 487280 - 488089 + | hypothetical protein TERM 506 488192 - 488216 + T 86 -6.5 -5.27779 | overlap 488195 ATTATGTTAACATAG TGTCTCCAAAT ACA ATTTGGAGTTA TTTTTTCATCTTAGA TERM 507 488195 - 488213 + T 95 -10.4 -4.71318 | overlap 488192 ATGTTAACATAGTGT CTCCAAAT ACA ATTTGGAG TTATTTTTTCATCTT UU424.1 488522 - 488247 - | hypothetical protein UU425 488695 - 489372 + | hypothetical protein UU426 489429 - 489980 + | hypothetical protein TERM 508 490002 - 489972 - T 95 -7.8 -5.51165 | opp_overlap 489973, overlap 489973 AAAATTTTAAAAAAA TTCTTTTAATTATC AAA GACAATTAAAAGAT TATTTAAATAATTTT TERM 509 489973 - 490001 + T 82 -9.1 -3.99347 | opp_overlap 489972 489973 AAATTTTAAAAAAAT TCTTTTAATTATC AAA GACAATTAAAAGA TTATTTAAATAATTT TERM 510 490001 - 489973 - T 93 -11.3 -3.88259 | opp_overlap 489973, overlap 489972 AAATTTTAAAAAAAT TCTTTTAATTATC AAA GACAATTAAAAGA TTATTTAAATAATTT TERM 511 490165 - 490132 - T 81 -5.6 -5.15526 | gap 1, opp_overlap 490132 ATAGAAAATTAAAAA CCATTTATAAGTATT TTTAT AAC-CTTATAAATGG TTTTTATTGTTTAAT TERM 512 490132 - 490165 + T 73 -4.1 -5.39905 | opp_overlap 490132 ATAGAAAATTAAAAA CCATTTATAAG TATTTTTATAAC CTTATAAATGG TTTTTATTGTTTAAT UU427 490704 - 490192 - | hypothetical protein TERM 513 490775 - 490797 + r 95 -9.3 -5.19916 | opp_overlap 490775 TATAAGAAATAAAAA CCTTAAAAC TTAAC GTTTTAAGG TTTTTTAAATCTTTT TERM 514 490797 - 490775 - R 100 -9.3 -5.50774 | opp_overlap 490775 TATAAGAAATAAAAA CCTTAAAAC TTAAC GTTTTAAGG TTTTTTAAATCTTTT ureD 491674 - 490811 - | urease complex component ureG 492304 - 491684 - | urease complex component ureF 493138 - 492386 - | urease complex component ureE 493529 - 493080 - | urease complex component ureC 495390 - 493594 - | urease subunit alpha ureB 495810 - 495436 - | urease complex component ureA 496162 - 495857 - | urease complex component fhuC 496464 - 497627 + | ferrichrome transport ATP-binding protein TERM 515 497682 - 497625 - f 83 -3.8 -6.14618 | opp_overlap 497636 497641 497672, overlap 497629 497635 497636 GATAAAACAAAAAAA TAAATCAAAATTAAAATAAAAACCGC ATTGAA GTGGTTTTTATTTTATTATTAATTAA TAATTTATAAAAAAG TERM 516 497678 - 497629 - f 76 -4.6 -5.36181 | opp_overlap 497636 497641 497672, overlap 497625 497635 497636 AAACAAAAAAATAAA TCAAAATTAAAATAAAAACCGC ATTGAA GTGGTTTTTATTTTATTATTAA TTAATAATTTATAAA TERM 517 497672 - 497635 - f 74 -5.8 -4.78512 | opp_overlap 497636 497641, overlap 497629 497625 497636 AAAAATAAATCAAAA TTAAAATAAAAACCGC ATTGAA GTGGTTTTTATTTTAT TATTAATTAATAATT TERM 518 497671 - 497636 - f 78 -9.3 -3.43447 | opp_overlap 497636 497641, overlap 497635 497629 497625 AAAATAAATCAAAAT TAAAATAAAAACCGC ATTGAA GTGGTTTTTATTTTA TTATTAATTAATAAT TERM 519 497636 - 497671 + F 95 -11.5 -3.84246 | opp_overlap 497635 497629 497625 497636, overlap 497641 AAAATAAATCAAAAT TAAAATAAAAACCGC ATTGAA GTGGTTTTTATTTTA TTATTAATTAATAAT TERM 520 497641 - 497666 + F 84 -7 -4.95167 | opp_overlap 497636 497635 497629 497625, overlap 497636 AAATCAAAATTAAAA TAAAAACCGC ATTGAA GTGGTTTTTA TTTTATTATTAATTA hlyA 497710 - 498453 + | hemolysin TERM 521 499506 - 499495 - g 75 -3 -5.57888 | opp_overlap 499495 AGTAAAAAAAGAAAA TGTT AAAA AACA ATTATTTTTATTTGA UU437 498470 - 499525 + | hypothetical protein ruvB-1 499866 - 499537 - | holliday junction DNA helicase (fragment) UU439 499980 - 500231 + | hypothetical protein TERM 522 500284 - 500253 - T 82 -4.6 -5.8901 | opp_overlap 500255, overlap 500255 500283 ATATAAAATAAAAAA TATCTACTTTAG TTTTTGTG CTAAAGTAGATT TTATTTTTAAAATAA TERM 523 500282 - 500255 - T 79 -7.2 -4.55111 | opp_overlap 500255, overlap 500253 ATAAAATAAAAAATA TCTACTTTAG TTTTTGTG CTAAAGTAGA TTTTATTTTTAAAAT TERM 524 500255 - 500282 + T 93 -7.9 -5.27023 | opp_overlap 500255 500253 ATAAAATAAAAAATA TCTACTTTAGT TTTTGT GCTAAAGTAGA TTTTATTTTTAAAAT UU440 501812 - 500313 - | membrane lipoprotein UU441 503112 - 501760 - | hypothetical protein TERM 525 502446 - 502436 - GR 74 -5.4 -4.84761 | opp_overlap 502436 ATAGGCGCAGAAAAA CTAG TAC CTAG ATTTATATTTTTATC UU442 504316 - 503066 - | hypothetical protein TERM 526 504390 - 504367 - R 76 -4.7 -5.41143 | opp_overlap 504367 504362 TAGGTGTTAAAAAAA GTATTAGTC AAATAA AACTAATAC TTTTCTCAATTTAGT UU443 506542 - 504656 - | membrane lipoprotein TERM 527 506676 - 506650 - R 89 -6 -5.50723 | opp_overlap 506651 506666, overlap 506673 TTATTAAAATAAAAA TCTACTCTAG TTTTATT CTAAAGTAGA TTGATCTAAAGTTAG UU444 506874 - 506698 - | hypothetical protein UU445 507491 - 507066 - | hypothetical protein hsdS-4 507775 - 508224 + | type I restriction enzyme S protein (fragment) hsdS-5 508300 - 508674 + | type I restriction enzyme S protein (fragment) TERM 528 508742 - 508732 - T 75 -4 -5.57888 | opp_overlap 508732 AGTAAAAAAAGAAAA TGTT AAA AACA ATTATTTTTATTTGA ruvB 509688 - 508750 - | Holliday junction DNA helicase B TERM 529 509505 - 509528 + g 74 -6.8 -4.25606 | AATTAACATTCATTT CATTAGCAAT TATA AGTGCTAATG TTGTTTTCCCTGTTC ruvA 510265 - 509678 - | holliday-junction binding protein UU450 511470 - 510307 - | hypothetical protein TERM 530 510561 - 510575 + g 79 -8.6 -3.66117 | opp_overlap 510560 510558 510561, overlap 510558 AAGGGACAAAATTAG TTGCTG TGA CAGCAA TATTTGTATAATTAA TERM 531 510575 - 510561 - G 70 -8.6 -2.51193 | opp_overlap 510561 510558, overlap 510560 510558 AAGGGACAAAATTAG TTGCTG TGA CAGCAA TATTTGTATAATTAA TERM 532 510766 - 510779 + g 70 -3.9 -5.12971 | ATTTTGATTATTTTT TTGAA TTAA TTCAA TTTTTGTTAAATATT TERM 533 511541 - 511526 - R 100 -9 -5.45652 | opp_overlap 511528 ATTCCTAATAAAAAA GAAGGG CACC CCCTTC TAAAAATTTTACTTT UU451 512566 - 511550 - | hypothetical protein TERM 534 512677 - 512697 + r 79 -3.4 -6.04953 | TCTAATAAGCACGTG CAAATAAA GTCAA TTTGTTTG TTTTTTTATTTGTAT proS 514081 - 512663 - | prolyl-tRNA synthetase UU453 514574 - 514107 - | hypothetical protein nifS 515769 - 514561 - | nitrogen fixation protein - class-V pyridoxal-phosphate aminotransferase UU455 515969 - 519367 + | hypothetical protein TERM 535 519857 - 519844 - g 74 -2.5 -5.79588 | overlap 519855 TTAAAACTAAAAAAA TTATA TGAA TATAA AATTAAAAATAATTT rpe 519367 - 520026 + | d-ribulose-5-phosphate 3 epimerase TERM 536 520111 - 520124 + T 76 -3.8 -5.72254 | opp_overlap 520103 520100 520095 520111, overlap 520104 520100 TAATTAATAAAAAAA CACC ACTGCA GGTG TTTTTTATTATTTAA TERM 537 520124 - 520111 - T 76 -3.8 -5.87996 | opp_overlap 520111 520104 520100, overlap 520103 520100 520095 TAATTAATAAAAAAA CACC ACTGCA GGTG TTTTTTATTATTTAA pheT 522471 - 520153 - | phenylalanyl-tRNA synthetase subunit beta TERM 538 520680 - 520694 + g 77 -5.8 -4.77896 | opp_overlap 520673 520680 520691, overlap 520691 CAAAATTATTAACTA TTAATG AAT CATTAA TTTTTGAATTAATTA TERM 539 520767 - 520784 + g 71 -7.1 -3.88832 | opp_overlap 520767, overlap 520765 AATCAACTGGATTAA TCTTTGA AATC TCAAAGA TATTTTCTAATTCAT pheS 523504 - 522503 - | phenylalanyl-tRNA synthetase subunit alpha UU459 523981 - 523511 - | hypothetical protein nadE 524741 - 523974 - | NH(3)-dependent NAD(+) synthetase obgE 526056 - 524749 - | GTPase ObgE TERM 540 525219 - 525231 + g 72 -6.3 -4.21631 | opp_overlap 525219, overlap 525208 CTATTTTATTAGCAA CCAAT ACA ATTGG TTTGTTAACTAAATT UU462 526877 - 526059 - | hypothetical protein fmt 527861 - 526944 - | methionyl-tRNA formyltransferase TERM 541 527163 - 527141 - G 76 -7.8 -3.76393 | opp_overlap 527141 ATACTTTAATTGAAA CGCCATTATA TTG CATAATAGCG ATTGGTTTATCATAC TERM 542 527713 - 527703 - G 77 -5.4 -4.9138 | ATGATCTAAACAAAA CTGT TTA ACAG GAGAGTAGATAACAT TERM 543 527934 - 527914 - R 79 -6.9 -4.46493 | opp_overlap 527914 527917 GTAAAGATAGCAAAA TAACTCCTT AAA ATGGAGTTA TTAGTTTGTTTTATT TERM 544 527914 - 527934 + r 71 -6.9 -3.85719 | opp_overlap 527914, overlap 527917 GTAAAGATAGCAAAA TAACTCCTT AAA ATGGAGTTA TTAGTTTGTTTTATT UU464 528660 - 527935 - | hypothetical protein def 528910 - 529506 + | peptide deformylase parE/gyrB 529513 - 531441 + | DNA topoisomerase IV subunit B TERM 545 533452 - 533462 + G 74 -5.4 -4.90266 | TTTCTAAATTAGGAT TAGC CCT GCTA TTTTTAGTTCATGAA TERM 546 533819 - 533796 - g 74 -5.4 -4.84642 | opp_overlap 533801, overlap 533797 CCCAAACCAACAAAA CTAGATACTA AAAT TAGTATCTAT GAAAACGATCAAATG TERM 547 533818 - 533797 - g 79 -8.9 -3.497 | opp_overlap 533801, overlap 533796 CCAAACCAACAAAAC TAGATACTA AAAT TAGTATCTA TGAAAACGATCAAAT parC/gyrA 531447 - 533999 + | topoisomerase IV subunit A TERM 548 534638 - 534617 - g 76 -8.1 -3.75419 | overlap 534620 AAAATTAATATACAA GAACATCAA ATAC TTGATGCTC CCGGAGTTTGTTTTG UU468 533999 - 535084 + | ATP/GTP-binding protein nadD 535111 - 536289 + | putative nicotinate-nucleotide adenylyltransferase pfs 536299 - 536655 + | purine nucleoside phosphorylase UU471 536799 - 536990 + | hypothetical protein UU472 537097 - 537348 + | hypothetical protein TERM 549 538070 - 538055 - g 70 -4 -5.14477 | TACACACTTAAAAAA GTCGTT TTAA AACAAC ATAATCAACCAAATA UU473 537638 - 539965 + | hypothetical protein TERM 550 541324 - 541300 - g 72 -6.6 -4.27694 | opp_overlap 541303, overlap 541297 541311 TGAATTAATAAATAA CAATGGTAAA ACTAA TTTACCATTA GATACTAACTTAACT UU474 540008 - 543949 + | hypothetical protein TERM 551 544025 - 543975 - T 91 -12.3 -3.38951 | gap 1, opp_overlap 543977 543985, overlap 543977 543985 TTATTAATATAGTAA GATATCAAAACTCCTCTACTAGAA AAAG TTCTT-TAGAGGAGTTTTGATATT ATTTAGCATTTTAAT TERM 552 543977 - 544023 + T 100 -14.9 -4.00411 | gap 1, opp_overlap 543975 543977 543985, overlap 543985 ATTAATATAGTAAGA TATCAAAACTCCTCTACTAGAA AAAG TTCTT-TAGAGGAGTTTTGATA TTATTTAGCATTTTA TERM 553 544023 - 543977 - T 100 -14.9 -3.25877 | gap 1, opp_overlap 543977 543985, overlap 543975 543985 ATTAATATAGTAAGA TATCAAAACTCCTCTACTAGAA AAAG TTCTT-TAGAGGAGTTTTGATA TTATTTAGCATTTTA TERM 554 544015 - 543985 - T 74 -6.3 -4.43815 | gap 1, opp_overlap 543977 543985, overlap 543977 543975 AGTAAGATATCAAAA CTCCTCTACTAGAA AAAG TTCTT-TAGAGGAG TTTTGATATTATTTA TERM 555 543985 - 544015 + T 74 -6.3 -4.52347 | gap 1, opp_overlap 543985 543977 543975, overlap 543977 AGTAAGATATCAAAA CTCCTCTACTAGAA AAAG TTCTT-TAGAGGAG TTTTGATATTATTTA UU475 545886 - 544036 - | hypothetical protein TERM 556 546020 - 545994 - R 89 -6 -5.50723 | opp_overlap 545994, overlap 546017 TTATTAAAATAAAAA TCTACTCTAG TTTTATC CTAAAGTAGA TTGATCTAAAGTTAG UU476 548519 - 546042 - | ATP/GTP-binding protein TERM 557 547004 - 547018 + g 72 -7.2 -3.69621 | AAACACGTGTTTTAC CTTCAA TTT TTGAAG TTTCGCCTTCTAAGT TERM 558 547475 - 547489 + g 70 -3.6 -5.25154 | opp_overlap 547475 AAGTCTTTTTAGAAA TTTCTT TTA GAGAAA TTTTATTATTTTTTT TERM 559 547947 - 547962 + g 77 -4.8 -5.20633 | TTCAAATCGTGTTTC TTCTTT TTTA AAAGAA TTTTTGTGTATTTTT mod 549607 - 548525 - | adenine specific DNA methyltransferase UU478 550112 - 549762 - | hypothetical protein TERM 560 549999 - 550009 + g 72 -3.2 -5.28826 | CACATTATCTAAATC CTGG GGA TCAG TTTTTTCTAAAATTT TERM 561 550011 - 550021 + g 74 -2.6 -5.66868 | overlap 550017 ATCCTGGGGATCAGT TTTT TCT AAAA TTTTTTTAATTAATT TERM 562 550251 - 550224 - R 84 -5 -5.71638 | opp_overlap 550224 TAATAATTAAAAAAA CTTTTAGTAAAT TTAT AATCACTAAAAG TTTTTGAATTTATAT UU479 553343 - 550266 - | hypothetical protein TERM 563 551519 - 551529 + g 86 -4 -6.04419 | AATTATTATTGATTG TCAA AGG TTGA TTTTTTTCTTCTTTT TERM 564 552481 - 552457 - G 70 -7.3 -3.53224 | opp_overlap 552457 552452 552476 TATGGTTGGTTTAAA CTATTAACATT TAA ATTGTTAATAG TTTTATTATGATATG TERM 565 552457 - 552481 + g 86 -7.3 -4.82819 | opp_overlap 552457, overlap 552452 552476 TATGGTTGGTTTAAA CTATTAACATT TAA ATTGTTAATAG TTTTATTATGATATG UU480 553654 - 555273 + | ATP/GTP-binding protein TERM 566 555392 - 555364 - T 100 -16.3 -4.4017 | opp_overlap 555364 TTAATTTTTATAAAA TCCAATACCTTAA GTA TTAAGGTATTGGA TTTTTGTGTTATATA TERM 567 555364 - 555392 + T 100 -16.3 -5.1764 | opp_overlap 555364 TTAATTTTTATAAAA TCCAATACCTTAA GTA TTAAGGTATTGGA TTTTTGTGTTATATA TERM 568 555560 - 555533 - T 86 -9.3 -4.50661 | opp_overlap 555532 AATTTATAACTAAAA GTCTACCTTCT TTTTAT AAAAGGTAGAC AATTTAATTTATGAT UU481 558271 - 555605 - | hypothetical protein TERM 569 555641 - 555664 + g 93 -6.2 -5.42265 | gap 1, opp_overlap 555647, overlap 555644 TTTTTTATCATTTGG GACTAATGCAA TTT TTGCATTA-TC TTTTTTATCATTTGC TERM 570 555644 - 555662 + g 86 -9 -4.32919 | opp_overlap 555647, overlap 555641 TTTATCATTTGGGAC TAATGCAA TTT TTGCATTA TCTTTTTTATCATTT UU482 572870 - 558804 - | hypothetical protein TERM 571 560978 - 561003 + g 74 -2.7 -5.65927 | gap 1, overlap 560984 CAACAATTGTAGCAC TACTATCATTTC ATT GAACTG-TAGTA TTTTTTGTTTGAGTA TERM 572 561729 - 561748 + g 72 -8 -3.33792 | overlap 561728 AAATATTTTTCTTGT TTCATCAA TATT TTGATGAA TATTATCTAAATAAT TERM 573 564190 - 564212 + g 82 -7.1 -4.87052 | TTAGTGTAAGCTAAT GTTGGTTTT CTAAC AAAGCCAAC TTTTATTAGTTTATA TERM 574 564383 - 564348 - G 71 -8.6 -2.83715 | overlap 564355 564358 TTCATCATCATTAGA TTTCAAATAAGTAATA ATGC TATCACCTACTTGAAA TACGTGATCTTTAGA TERM 575 566753 - 566778 + g 81 -9.3 -3.76884 | CTTCACCATTGATAT TTTGAAATTTA AGTT TAAATTTCAAA TTCTTACTAATATGT TERM 576 570056 - 570041 - G 75 -7.6 -4.07568 | opp_overlap 570055 CTGGTGCTTTTAAAA CAAGCT TACG AGCTTG ATCGACACCATCATT TERM 577 570541 - 570556 + g 86 -3.4 -5.99154 | TTATTATCATCGGTT TTAAAT GTTA ATTTAA TTTTTTTATTTGCTA TERM 578 572801 - 572812 + g 77 -2.2 -5.97979 | opp_overlap 572790, overlap 572790 GCAATAAGAAAAGAC GTTG CTTA CGAC TTTTTTTATTATTAT TERM 579 572982 - 572968 - R 100 -3.5 -7.14698 | AAAAAAAAAAAAAAA GACCA TTGAT TGGCC TTTGTACTTATAAAA UU483 576408 - 573097 - | MBA N-terminal paralog TERM 580 573593 - 573625 + g 95 -11.5 -3.66999 | AATTCAATTGTTTGG TGCTCATAGTCGATT TTT AATTGGTTATGAGCA TTTAAATCAATACAT TERM 581 576529 - 576499 - H 100 -8.4 -7.14698 | opp_overlap 576499 AAAAAAAAAAAAAAA CACTGCTTTTAATA CCT TAATAAAAGCGGTG TTTAAATAAGTGAAT TERM 582 576499 - 576529 + H 88 -10.6 -3.66999 | opp_overlap 576499 AAAAAAAAAAAAAAA CACTGCTTTTAATA CCT TAATAAAAGCGGTG TTTAAATAAGTGAAT TERM 583 577168 - 577139 - g 79 -8.8 -3.6123 | overlap 577137 577135 577140 ATAAAAATAAATACA CTATTGCTATTG ATCAAA CAATAGCAATAA AACATAAAATTCGTA TERM 584 577167 - 577140 - g 78 -10.1 -2.74298 | overlap 577139 577137 577135 TAAAAATAAATACAC TATTGCTATTG ATCAAA CAATAGCAATA AAACATAAAATTCGT ackA 576679 - 577842 + | acetate kinase UU485 579963 - 577846 - | membrane lipoprotein mnuA-2 581452 - 580148 - | hypothetical protein UU487 584345 - 581604 - | MBA N-terminal paralog TERM 585 581880 - 581910 + g 73 -5.7 -4.70879 | opp_overlap 581883 GCTAAACGTTCTAGA TAATGAAAATGTT CAATT AGCATTTTTATTA TTTTTAGGCTTTAAA TERM 586 584537 - 584506 - R 100 -10.4 -5.84432 | opp_overlap 584527 TATAATATAAAAAAA TACTTTAAGAACAT TGGG AGGTTCTTAAAGTA AGAATTTAATTTTTA apt 585080 - 584559 - | adenine phosphoribosyltransferase TERM 587 585025 - 585049 + g 74 -5 -5.02715 | opp_overlap 585005 585004 AAAACGATTCCTTTT TTAGGGAAGT CTGGT ACATCCCTGA TTTTTGATTTAATGT UU489 588112 - 585101 - | membrane lipoprotein TERM 588 587935 - 587973 + g 77 -4.6 -5.21506 | opp_overlap 587935 587930 AATCATTCAATAAAA CTTGTGTTCTTGCTGATA TTT TATCACCAAAATCACCAG TTTTTATATTCTTAT TERM 589 587973 - 587935 - G 78 -6.8 -4.69656 | opp_overlap 587935, overlap 587930 AATCATTCAATAAAA CTTGTGTTCTTGCTGATA TTT TATCACCAAAATCACCAG TTTTTATATTCTTAT UU490 588434 - 588901 + | hypothetical protein TERM 590 588917 - 588906 - g 75 -4.4 -5.243 | GAAATGATTAAAAAA TACG GAAT CGTA GCTATTGTTGGAAAA TERM 591 589278 - 589246 - g 79 -10.1 -3.06618 | overlap 589244 589243 ATAAAGAAAATATTA TTTTAGTCATTTCAA AAG CTGAAATGGCTAAAA ATCAAGATCAAATTG era 588882 - 589796 + | GTP-binding protein UU492 589796 - 590512 + | hypothetical protein glyS 590546 - 591967 + | glycyl-tRNA synthetase TERM 592 592218 - 592188 - g 77 -5.5 -5.0916 | opp_overlap 592190, overlap 592190 TGCTGAATATAAAAA GATCTCCTATGCT TTAGC AGCACAAGAGATT GTTCAATTAATGAAT TERM 593 592216 - 592190 - g 80 -8.1 -4.17211 | opp_overlap 592190, overlap 592188 CTGAATATAAAAAGA TCTCCTATGCT TTAGC AGCACAAGAGA TTGTTCAATTAATGA TERM 594 592282 - 592268 - g 73 -3.6 -5.28778 | ATCATTTACAAAAAA TTTCTC CAC AAGAAA TTAAAAAAAATAAGG TERM 595 592369 - 592356 - g 73 -3.9 -5.38549 | opp_overlap 592356 TTTAAATAATAAAAA TAACA TTCA TGTTA TTGATTATTTAACTA dnaG 591955 - 593880 + | DNA primase TERM 596 593924 - 593894 - T 84 -5.6 -5.50925 | opp_overlap 593885 593894 AATGAATACAAAAAA GCTTTTTAGTAA TGTTTGT TTACTAGAAAGC TTTTTTTATTATTAA TERM 597 593894 - 593924 + T 100 -7.8 -5.95946 | opp_overlap 593894, overlap 593885 AATGAATACAAAAAA GCTTTTTAGTAA TGTTTGT TTACTAGAAAGC TTTTTTTATTATTAA UU495 608976 - 593959 - | membrane lipoprotein TERM 598 595948 - 595959 + g 72 -3 -5.34857 | AACTAATGGAGGGTT CAAA GGTA TTTG TTTTCTTTTATTTGG TERM 599 601896 - 601910 + g 73 -5.8 -4.72556 | TTGGTGTTAAATCCT TTAATG TAA CATTAA TTTTATGATTTTTAA TERM 600 602559 - 602577 + g 77 -4.6 -5.09895 | overlap 602556 AGATAGTATCACTTG GTTTGCTT GTG AACCAAAC TTTTTTCACTCGATA TERM 601 608166 - 608182 + g 71 -6.7 -3.90943 | TTGTTTTGGGGTGCT TATTAGT TGT ACTAATA TTTAAATTTAATTTA UU496 611371 - 608954 - | hypothetical protein TERM 602 609799 - 609809 + g 70 -4 -5.12785 | CAACAATCGCAGCTG GTTT ACT AAAC TTTGTTTTTTGATTA UU497 611599 - 612732 + | hypothetical protein TERM 603 612766 - 612778 + T 100 -6.2 -7.14698 | opp_overlap 612766 TACTCATTAAAAAAA CGGC ACGGC GCCG TTTTTTTTTTTTTTT TERM 604 612778 - 612766 - T 100 -6.9 -5.53991 | opp_overlap 612766 TACTCATTAAAAAAA CGGCA CGG CGCCG TTTTTTTTTTTTTTT rpsD 613440 - 612832 - | 30S ribosomal protein S4 TERM 605 613390 - 613366 - G 75 -7.4 -4.02108 | opp_overlap 613358 613362, overlap 613362 TTTACCAGAATTAAA TTCTTTATTA TTTTC TAATAAAGAA AATCCTAAACGGCGT UU499 613706 - 615397 + | hypothetical protein TERM 606 615426 - 615408 - T 100 -10.4 -5.66229 | opp_overlap 615408 ATTAATAACAAAAAA TACTAGCT TTA AGCTAGTA TTTTTAATTTTATTT TERM 607 615408 - 615426 + T 100 -10.4 -5.19819 | opp_overlap 615408 ATTAATAACAAAAAA TACTAGCT TTA AGCTAGTA TTTTTAATTTTATTT UU500 617246 - 616455 - | hypothetical protein uvrD 619481 - 617250 - | DNA helicase II UU502 620327 - 619506 - | membrane lipoprotein epsG 621266 - 620328 - | glycosyltransferase TERM 608 621222 - 621193 - G 74 -6.7 -4.20516 | overlap 621167 TTTTGATTTAATAAA TCTAAAAAATAAT TAAA ATTTTTTTTTAGA TAATGAGTTGTCTTT TERM 609 621342 - 621308 - H 73 -5.3 -5.01497 | gap 1, opp_overlap 621308 621302, overlap 621302 ACTATTATATAAAAA TAAAACTAGAAGCA AAATAAAA TGCT-CTAGTTTTA TTTTAATTAATGGCG TERM 610 621492 - 621477 - H 100 -7.6 -7.07835 | opp_overlap 621477 CAAAAAAAAAAAAAA TCTGCA ACCA TGCAGA TTTTAGTGTATCAAT TERM 611 621477 - 621492 + H 80 -7.6 -4.39568 | opp_overlap 621477 CAAAAAAAAAAAAAA TCTGCA ACCA TGCAGA TTTTAGTGTATCAAT UU504 621853 - 623016 + | hypothetical protein UU505 622988 - 623848 + | hypothetical protein acpP 623865 - 624098 + | acyl carrier protein TERM 612 624276 - 624248 - T 77 -8.2 -4.06864 | opp_overlap 624250, overlap 624250 GCCATATAATAACAA CAGGACTGACAC TTTTT GTATCAGTCCTT TTTTGTTTTTGAAAA TERM 613 624274 - 624250 - T 88 -10.8 -3.61971 | opp_overlap 624250, overlap 624248 CATATAATAACAACA GGACTGACAC TTTTT GTATCAGTCC TTTTTTGTTTTTGAA TERM 614 624250 - 624274 + T 100 -8.6 -5.93252 | opp_overlap 624250 624248 CATATAATAACAACA GGACTGACAC TTTTT GTATCAGTCC TTTTTTGTTTTTGAA TERM 615 625160 - 625180 + T 93 -6.9 -5.42975 | opp_overlap 625160 GATACAAATAAAAAA GAAGCGAAT TAA ATTCACTTC TTTTTCTTTATCTAA TERM 616 625180 - 625160 - T 100 -9.1 -5.76237 | opp_overlap 625160 GATACAAATAAAAAA GAAGCGAAT TAA ATTCACTTC TTTTTCTTTATCTAA ampL 626570 - 625203 - | leucyl aminopeptidase TERM 617 626494 - 626514 + g 95 -6.9 -5.40474 | TCAGTTGTATTTTCT TCAAAACCT TTT AGGTTGTGA TTTTTTTCAACAGCT ftsK 628986 - 626683 - | cell division protein TERM 618 628070 - 628084 + g 71 -8.6 -2.77538 | overlap 628069 628068 TGTTTATCAATATTG TGGTGA TCT TCACCA AGTTTTTCTTCGAAA UU509 630673 - 629003 - | ATP/GTP-binding protein TERM 619 630350 - 630363 + g 71 -2.5 -5.52384 | TTTTTTATTGTTTAC TTTTT GTTC AAAAA TTTTTTTAATAACAA TERM 620 630490 - 630500 + g 86 -4.6 -5.64274 | TAAAAATTCCCTTAA CGCG TTT TGCG TTTTTTTCTAAATAA TERM 621 631084 - 631114 + GH 73 -2 -5.66989 | opp_overlap 631085 631109, overlap 631085 AAAACGGTTTGAATC ATTTTGTTATTGTT AAA AATTATAACAAAAA TTTTTTTCGTATTTA TERM 622 632221 - 632209 - gH 71 -4.9 -4.87052 | overlap 632201 TACAAATTAATAAAA TTACA TCA TGTAA AATTACCGAAAACCA ABC-2 630813 - 632789 + | ABC transporter TERM 623 633087 - 633053 - gT 85 -5.3 -5.28755 | gap 1, opp_overlap 633053 AAACAGATCAAAAAA TGATTGA-TATTAGTA TATA CACTAATACTCAACCA TTAATTGAATCTATA UU510.1 632764 - 633129 + | hypothetical protein cdsA 634254 - 633118 - | CDP-diglyceride synthetase TERM 624 633536 - 633522 - G 72 -4.4 -5.05505 | overlap 633534 ATGACAAACCAAAAA TTATTA ACA TAATAA CAATTGTTGCAATTA TERM 625 633684 - 633666 - G 74 -5.4 -4.8236 | opp_overlap 633667, overlap 633682 633683 CACTTAAAAAAACAA TCATCATT AGC AATAATGA AGTAATTCAACTTCT frr 634816 - 634265 - | ribosome releasing factor pyrH 635541 - 634834 - | uridylate kinase TERM 626 635419 - 635429 + g 70 -4 -5.25805 | opp_overlap 635419, overlap 635426 AATTGATACAATATA TTTC TTA GAAA TTTTTTCAATTTGTT TERM 627 635608 - 635584 - R 100 -10.9 -4.95758 | opp_overlap 635584 ACTACACTATAAAAA TAGAAAGAAAC TTT GTTTCCTTCTA TTTTTACATTTAAAA TERM 628 635584 - 635608 + r 90 -8.7 -4.81249 | opp_overlap 635584 ACTACACTATAAAAA TAGAAAGAAAC TTT GTTTCCTTCTA TTTTTACATTTAAAA tsf 636500 - 635625 - | elongation factor Ts TERM 629 636641 - 636603 - H 79 -7.9 -4.23353 | gap 1, opp_overlap 636604 636615, overlap 636615 AAATGAATAAAAATA CAT-TAAAAAAAACACTT TCAA AAGTGTTTTTTTTAGATA ATTTAATGGTGCGCT TERM 630 636604 - 636639 + H 73 -8.6 -2.98493 | opp_overlap 636603 636615, overlap 636615 AATGAATAAAAATAC ATTAAAAAAAACACTT TCAA AAGTGTTTTTTTTAGA TAATTTAATGGTGCG TERM 631 636615 - 636628 + H 84 -5.3 -5.82316 | opp_overlap 636615 636603, overlap 636604 ATACATTAAAAAAAA CACTT TCAA AAGTG TTTTTTTTAGATAAT TERM 632 636628 - 636615 - H 86 -5.3 -5.92337 | opp_overlap 636604 636615, overlap 636603 ATACATTAAAAAAAA CACTT TCAA AAGTG TTTTTTTTAGATAAT TERM 633 636849 - 636810 - H 100 -16 -3.1082 | gap 1, opp_overlap 636817, overlap 636813 636817 636840 TACTGAGCTAACAGA GCATAAACCCCTACCTACC CAA AGTAGATAGGGGTTTA-GC TAAATCCCACTAATA TERM 634 636847 - 636813 - H 100 -17.4 -2.76322 | opp_overlap 636817, overlap 636810 636817 636840 TGAGCTAACAGAGCA TAAACCCCTACCTACC CAA AGTAGATAGGGGTTTA GCTAAATCCCACTAA TERM 635 636843 - 636817 - H 100 -13.8 -4.06505 | opp_overlap 636817, overlap 636813 636810 636840 CTAACAGAGCATAAA CCCCTACCTACC CAA AGTAGATAGGGG TTTAGCTAAATCCCA TERM 636 636817 - 636843 + H 90 -10.9 -3.6682 | opp_overlap 636817 636813 636810 636840 CTAACAGAGCATAAA CCCCTACCTAC CCAAA GTAGATAGGGG TTTAGCTAAATCCCA TERM 637 637035 - 637071 + H 78 -6.2 -4.88736 | gap 1, opp_overlap 637041 637044, overlap 637041 ACTGAGCTAGCACTC CAC-AAATAATACTTAA ATTT TTAAGTATTACTTCGTG TTTTTATAAATGGTG TERM 638 637041 - 637064 + H 71 -8.4 -2.77439 | opp_overlap 637041 637044, overlap 637035 CTAGCACTCCACAAA TAATACTTAA ATTT TTAAGTATTA CTTCGTGTTTTTATA TERM 639 637064 - 637041 - H 79 -8.4 -3.90318 | opp_overlap 637041 637035, overlap 637044 CTAGCACTCCACAAA TAATACTTAA ATTT TTAAGTATTA CTTCGTGTTTTTATA TERM 640 637278 - 637306 + H 73 -4.8 -5.1971 | overlap 637301 AAATTATAGTTATTT TTTTAAAAAATG TCAAT CTTTTTTTAAAA TTTTTAATTTTTAAT TERM 641 637392 - 637368 - H 76 -8.1 -3.91858 | opp_overlap 637367, overlap 637388 TATATATGTTATAAA TTTTATAATCT CAA AGACTATAAAA AATATTTTTAATAAG TERM 642 638278 - 638301 + G 70 -5.4 -4.56597 | opp_overlap 638278 CTTTATTAGGAGTAA TTGTTGGAAT TATT ATTCAAACAA TTTTTAAAAAAACAC ABC-3 637428 - 638483 + | ferrichrome ABC transporter fatC-3 638485 - 639510 + | ferric anguibactin transport system permerase protein TERM 643 639507 - 639495 - f 76 -3.5 -5.76949 | overlap 639504 TATTGTTAAAAAAAA TAAAT CAG ATTTA TAGTAAAATATACAA TERM 644 641157 - 641133 - g 70 -5.2 -4.64464 | opp_overlap 641133 TAAACCAAATGAAAA TAATAATTGA ATTGA CCAATTATTA TAATTTTGTTTATTT ABCsbp-8 639550 - 641160 + | putative ABC substrate-binding protein - iron UU518 641232 - 641450 + | hypothetical protein TERM 645 641487 - 641524 + T 100 -6.6 -5.61881 | opp_overlap 641487 TTAATTGATTAAAAA CATTAAGAAGTACA CCCTAATAAA TGTATTTCTTAATG TTTTTATTTTTCGAA TERM 646 641524 - 641487 - T 81 -6.5 -4.77157 | opp_overlap 641487 TTAATTGATTAAAAA CATTAAGAAGTACACCC TAAT AAATGTATTTCTTAATG TTTTTATTTTTCGAA UU519 643357 - 641564 - | hypothetical protein TERM 647 641616 - 641633 + g 73 -3.5 -5.30616 | overlap 641611 641617 TATTGATTAGTAATT TGATTAT CTTT ATAATCG TTTTTATTTAAATAC TERM 648 642294 - 642280 - G 70 -3.6 -5.18355 | TTGAAAAACCAAAAA TAATTG CTG CAATCA TTAAATAAACAAACA TERM 649 642778 - 642747 - G 70 -2.4 -5.4833 | gap 1, overlap 642748 TTACCTAATAAAAAA CTTGTCAC-TAAACA AAT TGTTCATGTGGCAAA ATCTAAAATAATAGT TERM 650 643416 - 643445 + r 82 -9.7 -3.66908 | opp_overlap 643416, overlap 643405 643412 CCATTAATATAAAAA TATTATTTAATAT GTGG ATATTAAATAATA TTAATTTTGACGAAC TERM 651 643445 - 643416 - R 95 -9.7 -5.1244 | opp_overlap 643405 643416 643412 CCATTAATATAAAAA TATTATTTAATAT GTGG ATATTAAATAATA TTAATTTTGACGAAC UU520 645281 - 643446 - | hypothetical protein pepF-2 647146 - 645311 - | oligoendopeptidase F - zinc metalloprotease TERM 652 646572 - 646591 + g 79 -3.6 -5.8096 | opp_overlap 646563 646572 646587, overlap 646587 GCAACATAAAGATCA GTTTGATT TTTA AAACAAAC TTTTTGTTTTTTATA TERM 653 646587 - 646597 + g 73 -4 -5.43621 | opp_overlap 646572 646587, overlap 646572 GTTTGATTTTTAAAA CAAA CTT TTTG TTTTTTATAGTTTAT TERM 654 647185 - 647212 + r 79 -3.5 -6.07374 | opp_overlap 647185 AGTTATAGAAAAAAA TGACCAAGTTT ACTAAA AGACTTAGTCA TTTTTTGTTTTTTGT TERM 655 647212 - 647185 - R 76 -3.5 -5.72616 | opp_overlap 647185 AGTTATAGAAAAAAA TGACCAAGTTT ACTAAA AGACTTAGTCA TTTTTTGTTTTTTGT tuf 648425 - 647241 - | elongation factor Tu TERM 656 647654 - 647665 + g 75 -4.4 -5.15381 | TAAACATTTCAATTC CTGT AACA ACAG TTTTTTGAGTGTCTT TERM 657 648494 - 648484 - R 74 -5.4 -4.90002 | opp_overlap 648484 648479 648488, overlap 648479 648488 GAATACATAATAAAA GGTA TTA TACC TTATAATTATAACAT fusA 650628 - 648562 - | translation elongation factor G TERM 658 648864 - 648896 + g 76 -7.1 -4.37886 | CTGGTTTGCATACTT TTGCTGCTTCTTT AAAAGCA AGAGATGCAGCAA TTTTATAAGCCATAC TERM 659 649437 - 649458 + g 77 -2.3 -5.86061 | overlap 649431 CAGGTTCTGCAAATA CCATTTGTT CTAA AATAACTGG TTTTTTTTCATCACA TERM 660 649583 - 649593 + g 79 -4 -5.65678 | opp_overlap 649583 ATTTTTACAAGACGA GAAA TTC TTTC TTTTTTATCTTTTGT rpS7 651122 - 650655 - | 30S ribosomal protein S7 rpsL 651575 - 651150 - | 30S ribosomal protein S12 TERM 661 651725 - 651703 - R 91 -5.7 -5.74086 | opp_overlap 651703 AAAGTAAATAAAAAA GAGCAAAAA CAAAT TTTTTACTC TTTTTTTAGGATTTA TERM 662 651703 - 651725 + r 71 -3.5 -5.49809 | opp_overlap 651703 AAAGTAAATAAAAAA GAGCAAAAA CAAAT TTTTTACTC TTTTTTTAGGATTTA UU526 653272 - 651761 - | MBA N-terminal paralog TERM 663 652875 - 652897 + g 71 -2.7 -5.53288 | overlap 652876 ATATTGCTTATATTT AGTGTTGTT ACATA AACAGCACC TTTTTTTAAATTAGC TERM 664 653218 - 653177 - G 71 -8.3 -2.85999 | gap 1, opp_overlap 653177 TGATTCGATATTAGA GTTAGTACAAGCAGTAGCTG TAG CAA-TAATACTTGTACTAAC TATTATTGAACCTAA UU527 656398 - 653483 - | hypothetical protein TERM 665 653931 - 653954 + g 74 -5.4 -4.78345 | TCAGCATTACTTGGT GGATAAAAAA ATAC TTTTGTATCC TTATTTTTATTTATT TERM 666 654388 - 654398 + g 79 -4 -5.74684 | opp_overlap 654388 AATAAACTAATAAAG GAAT ATA ATTC TTTTTCTTTTTGTTC TERM 667 654546 - 654556 + g 71 -2.6 -5.52023 | opp_overlap 654553, overlap 654553 GCTTTTCAATTATTT TTTA AAG TAAA TTTTTTATTAATAAT TERM 668 654724 - 654736 + g 73 -3.5 -5.37865 | TAATATTTTCATCTT TTTTT AAT AAAAA TTTTTTCGTTATTAA TERM 669 655039 - 655065 + g 90 -8.3 -4.66535 | overlap 655021 AAATATGATTGTTTT TATTATCTAAT TCATC ATTAGATAATA TTTGTTTTAAAGCTT dcm 657301 - 656402 - | cytosine-specific methyltransferase codV 657864 - 658619 + | integrase-recombinase protein TERM 670 658671 - 658645 - T 100 -8.9 -5.8901 | opp_overlap 658645 ATATAAAATAAAAAA TCTACTTCAGT TTTGC ACTAAAGTAGA TAATATAATTCAATT cpsG 660407 - 658749 - | phosphomannomutase TERM 671 660471 - 660455 - R 70 -8.1 -3.09313 | AACTATAGAGATATA TTTGGAT CTC ATCCAAA TGGTAATAATTGTTC cdd 660837 - 660442 - | cytidine deaminase TERM 672 660927 - 660954 + r 81 -8.6 -4.18018 | opp_overlap 660933, overlap 660933 TAAATGATAAGAGTA AAAAAACCATCA TTAT TGATGGTTTTTA TTTTAAATGGCAAGG TERM 673 660933 - 660948 + r 95 -7.6 -5.48213 | opp_overlap 660933, overlap 660927 ATAAGAGTAAAAAAA CCATCA TTAT TGATGG TTTTTATTTTAAATG TERM 674 660948 - 660933 - R 100 -7.6 -5.6473 | opp_overlap 660933 660927 ATAAGAGTAAAAAAA CCATCA TTAT TGATGG TTTTTATTTTAAATG pepP 662121 - 661048 - | XAA-Pro aminopeptidase TERM 675 661670 - 661686 + g 77 -5.1 -4.91459 | opp_overlap 661670 CAATTACATGTTAAA GCTGC AATATCA GCAGC TTTTTGTAAATATTC rpmG 662293 - 662132 - | 50S ribosomal protein L33 thrS 664096 - 662354 - | threonyl-tRNA synthetase TERM 676 664448 - 664459 + G 71 -5.8 -4.41494 | TTCAAACAAGTTGTA CACC ATAT GGTG TTTTAATTGAAGCTA UU535 664249 - 665145 + | hypothetical protein truA 665867 - 665142 - | tRNA pseudouridine synthase A TERM 677 665178 - 665202 + g 90 -8.6 -4.6644 | opp_overlap 665177 665176 665170, overlap 665164 ATATAATCCACAAGC GGGTGCTAAT TTAAT ACTAGCACCC TTTTTGGGGTATATT TERM 678 665918 - 665900 - R 100 -6.8 -5.80003 | opp_overlap 665900, overlap 665905 CCAATAAATAAAAAA TAACCTGT TTA ACAAGTTA TTTCATCAAATTACT UU537 667245 - 665929 - | hypothetical protein ABC-4 668547 - 667246 - | cobalt transporter ATP-binding subunit TERM 679 668370 - 668383 + g 74 -2.5 -5.78622 | opp_overlap 668370 668377 CAGAATTTCCAATAA TAAAA TAGA TTTTA TTTTTTTTAAAATCA ABC-5 669419 - 668535 - | cobalt transporter ATP-binding subunit TERM 680 669534 - 669505 - R 100 -13.1 -3.88464 | opp_overlap 669503 669501 669510, overlap 669510 TTAAAAATAGGTAAA TAAAAGGTGTTAG ATAA CTAACACCTTTCA CATGTTTTATTATAA TERM 681 669529 - 669510 - R 100 -10.8 -4.93288 | opp_overlap 669510 669503 669501, overlap 669505 AATAGGTAAATAAAA GGTGTTAG ATAA CTAACACC TTTCACATGTTTTAT TERM 682 669510 - 669529 + r 88 -10.8 -3.7229 | opp_overlap 669505 669510, overlap 669503 669501 AATAGGTAAATAAAA GGTGTTAG ATAA CTAACACC TTTCACATGTTTTAT rplA 670248 - 669559 - | 50S ribosomal protein L1 rplK 670703 - 670251 - | 50S ribosomal protein L11 UU542 670982 - 673408 + | hypothetical protein TERM 683 675265 - 675250 - g 86 -6.2 -5.12617 | TAATGATTTAAAAAA TTTGGA TTAT TCCAAA AATGGACGTTATTTA TERM 684 676565 - 676554 - g 72 -3 -5.34381 | AAATGCAAACAAAAA CAAA AAGA TTTG CTAATGAAATTAAAA UU543 673532 - 677773 + | hypothetical protein TERM 685 677801 - 677771 - T 74 -9.1 -2.84636 | opp_overlap 677777, overlap 677762 677777 AACCAATTTAATAAT TAAAAAGACGGCC GTAAA GACCGTCTTTTTT TTAATGTTAATTGCT TERM 686 677777 - 677795 + T 100 -5.9 -5.94597 | opp_overlap 677771 677777 TTTAATAATTAAAAA GACGGCC GTAAA GACCGTC TTTTTTTTAATGTTA TERM 687 677795 - 677777 - T 90 -8.1 -4.99435 | opp_overlap 677777, overlap 677771 TTTAATAATTAAAAA GACGGCC GTAAA GACCGTC TTTTTTTTAATGTTA gatB 679255 - 677822 - | aspartyl/glutamyl-tRNA amidotransferase subunit B TERM 688 678053 - 678069 + g 85 -5.3 -5.27923 | TAGAATTTGAGGATC TTTATTT GTC AAATAAA TTTTTTCTAAAATTA gatA 680691 - 679258 - | aspartyl/glutamyl-tRNA amidotransferase subunit A TERM 689 680011 - 679997 - G 70 -6.4 -4.19276 | GTAAAATCTTTAAAA TCTCGC TTA GCAAGA GCATTAAAAACAATT TERM 690 680671 - 680683 + g 70 -3.5 -5.25735 | TTGATTATGAAGCGC TAAAA TAG TTTTA TTTTTCATTTTTTAA UU546 680965 - 680681 - | hypothetical protein UU547 682002 - 680986 - | hypothetical protein ung 682679 - 682041 - | uracil-DNA glycosylase UU549 684424 - 682658 - | membrane lipoprotein dnaB 685887 - 684427 - | replicative DNA helicase rplI 686330 - 685893 - | 50S ribosomal protein L9 rpS18 686653 - 686414 - | ribosomal protein S18 ssb 687162 - 686662 - | single-strand binding protein rpsF 687689 - 687207 - | 30S ribosomal protein S6 UU555 687858 - 688367 + | hypothetical protein TERM 691 688401 - 688381 - T 72 -2.6 -5.86465 | opp_overlap 688381 AATAATATAAAAAAA TCATGG AATTATTAA CCATGA TTTTTGGTCACAACT TERM 692 689083 - 689067 - T 71 -6.7 -4.03413 | ATTTTTTGACACAAA TATTCTA GTT TAGAATA TCAAAATTATTTAGA TERM 693 689131 - 689100 - T 70 -7.6 -3.42124 | opp_overlap 689099 689095, overlap 689101 CAAAATTATTTAGAA GTTTAACTTTATTT TGAA AAATAAAGTTAAAA ATACTATAGTATTTA TERM 694 689130 - 689101 - T 84 -11.1 -2.64551 | opp_overlap 689099 689095, overlap 689100 AAAATTATTTAGAAG TTTAACTTTATTT TGAA AAATAAAGTTAAA AATACTATAGTATTT UU556 689701 - 689213 - | hypothetical protein UU557 693105 - 689710 - | membrane lipoprotein TERM 695 691451 - 691462 + g 75 -4.4 -5.17054 | TCTAGGATTGGAATG TCCT TATT AGGA TTTTTTAAATATTCT UU558 698775 - 693124 - | hypothetical protein TERM 696 694418 - 694395 - G 82 -10.4 -2.70994 | opp_overlap 694394 694394 694395, overlap 694394 TTAATGTTACATAAT CTGATGAAAC AACA GTTCCATCAG CATTTGGAATTTCAG TERM 697 694691 - 694710 + g 73 -9.2 -2.90633 | opp_overlap 694690 694689 TTATATGTATCAAGT GGCTCTCC ATAT GGTGAGCC TGGTCTTTCATATTT TERM 698 696441 - 696465 + g 80 -4.3 -5.55769 | opp_overlap 696440 696443, overlap 696443 696454 CCGCCTCAAATAATT CATCGTATTTT TGT AAAAAACGACG TTTTTTATTATAGAA oppF 700113 - 698794 - | oligopeptide transport system permease protein oppD 701654 - 700134 - | oligopeptide transport system permease protein oppC 702656 - 701658 - | oligopeptide transport system permease protein oppB 703794 - 702661 - | oligopeptide transport system permease protein UU563 704249 - 703809 - | hypothetical protein TERM 699 704308 - 704297 - RH 70 -4.4 -4.98255 | overlap 704300 CTTTAATGACAAAAA CCAT CAGC ATGG CAATGATGAATACTA UU564 705477 - 704284 - | membrane lipoprotein UU564.1 705450 - 705710 + | hypothetical protein TERM 700 705872 - 705886 + Tr 77 -5.7 -5.04733 | opp_overlap 705872, overlap 705867 AAAAAATAAAAAAAA TGGTC ACGAC GACCA TTTTATTTCTCATTA TERM 701 705886 - 705872 - TR 100 -6.4 -6.47325 | opp_overlap 705872 705867 AAAAAATAAAAAAAA TGGTCA CGA CGACCA TTTTATTTCTCATTA UU565 707391 - 705907 - | hypothetical protein TERM 702 707336 - 707351 + g 72 -3.4 -5.3658 | GTTTTATTTGTTCAA TTAAAA ATCT TTTTAA TTTTGTTTTTATGAT TERM 703 707480 - 707504 + r 73 -5.1 -5.08601 | opp_overlap 707480 TAAACATAAAAAAAA CAACAACTATT TAT AGTAATTGTTG TTTTTATTCAAATAA TERM 704 707504 - 707480 - R 91 -5.1 -6.15717 | opp_overlap 707480 TAAACATAAAAAAAA CAACAACTATT TAT AGTAATTGTTG TTTTTATTCAAATAA rplS 707897 - 707526 - | 50S ribosomal protein L19 trmD 708593 - 707907 - | tRNA (guanine-N1)-methyltransferase TERM 705 708176 - 708161 - G 70 -6.2 -4.01853 | TAACAGCATCAGAAA TTACCA TACT TGGTAA TTCCCCCCCTGTTAA TERM 706 708619 - 708635 + r 74 -3.7 -5.65927 | overlap 708621 AATTATTTAGCTTTA CTTAAAG CAG CTTTACG TTTTTTATTTGCATC rpS16 708911 - 708606 - | ribosomal protein S16 TERM 707 708739 - 708749 + g 74 -5.4 -4.79949 | opp_overlap 708739, overlap 708737 CCGTTTTGTAATTGA GCTA AAA TAGC TTCTTTTTTTAAAAC TERM 708 708961 - 708994 + r 73 -3.9 -5.50723 | opp_overlap 708961 TATAAATAAAAAAAA CCAAGCTGTCAAGTA TTTT TACTTAACGCTTTGG TTTTTATTTTAGTAA TERM 709 708993 - 708961 - R 91 -5 -6.28967 | gap 1, opp_overlap 708961 TATAAATAAAAAAAA CCAAGCTGTCAAGTA TTTT TACTTAAC-GCTTTG GTTTTTATTTTAGTA UU569 709831 - 708998 - | hypothetical protein TERM 710 709397 - 709408 + g 72 -3 -5.38839 | TTTATTAAAAATTGG GTTT AAAC AAAC TTTTCTTTTTGTGTG UU570 711652 - 709862 - | hypothetical protein TERM 711 711866 - 711839 - R 83 -6.5 -5.09521 | opp_overlap 711839, overlap 711833 TTAATAAATTAAAAA GTATTAAGAAT TATACT ACTCTTAATAC TTTGTACAATTAGTG UU571 715995 - 711892 - | ATP/GTP-binding protein TERM 712 712205 - 712215 + g 78 -2.6 -5.87996 | GGAAAGATTTGGTAT TTAT TTG ATAA TTTTTTTGTTAGTTC TERM 713 712411 - 712427 + g 70 -2.3 -5.47218 | opp_overlap 712411 TTGATGACCATAAAG TGATTTT ATA ACAATCA TTTTTTTACGTGCAC TERM 714 713820 - 713831 + g 77 -5.8 -4.76478 | overlap 713810 TTACTTCTTGACTAT CACG ATTG CGTG TTTTAATTTCTTTTA TERM 715 714782 - 714804 + g 81 -7.2 -4.69214 | opp_overlap 714779 714782 714786 714787, overlap 714786 714792 714792 AAATCATTTAAATTA GAAATTTTTT CAA AAAAAGTTTC TTTGTTTGTTAAATC TERM 716 716129 - 716119 - H 70 -4 -5.1287 | opp_overlap 716119 716122 TCTACATTTAAAAAA TAAC TTT GTTA TAAAGTTGTATAATT TERM 717 717144 - 717128 - g 80 -4.4 -5.54907 | opp_overlap 717131 GTTATAAAACAAAAA CAAGCG GACGT CGCTTA ATGAGTTTTATTTTC TERM 718 717634 - 717612 - g 77 -5 -5.20606 | opp_overlap 717614, overlap 717614 AAATAGTAATAAAAA CATGATTTTT TCT AAAAATCATC AATTAAATTTAGCCA TERM 719 717632 - 717614 - g 77 -7.6 -4.20491 | opp_overlap 717614, overlap 717612 ATAGTAATAAAAACA TGATTTTT TCT AAAAATCA TCAATTAAATTTAGC UU572 716191 - 717927 + | hypothetical protein TERM 720 718008 - 718060 + G 78 -3.2 -5.64274 | gap 1, opp_overlap 718030 TGACAAATGATGAGC GTAAAGAATTT-ATTAGAAAAAATA AAAT TATTTATTTTAATCGAATTCGTTAC TTTTTTTATGAATGA kch 717992 - 719278 + | potassium channel protein TERM 721 719316 - 719276 - T 100 -7.1 -5.84381 | opp_overlap 719279 719286, overlap 719279 TCATCAACAAAAAAA TAATTAAAAACCTGCAA GGTTAAA TTGCTGGTTTTTAATTT TATTTTCAATATTTA TERM 722 719313 - 719279 - T 93 -8.8 -4.96435 | opp_overlap 719279 719286, overlap 719276 TCAACAAAAAAATAA TTAAAAACCTGCAA GGTTAAA TTGCTGGTTTTTAA TTTTATTTTCAATAT TERM 723 719279 - 719313 + T 93 -8.8 -5.11836 | opp_overlap 719276 719279, overlap 719286 TCAACAAAAAAATAA TTAAAAACCTGCAA GGTTAAA TTGCTGGTTTTTAA TTTTATTTTCAATAT UU574 720233 - 719316 - | hypothetical protein UU575 721192 - 720239 - | hypothetical protein TERM 724 721238 - 721212 - R 82 -9.7 -3.72788 | opp_overlap 721211 721218 721220 721233, overlap 721218 721220 CCTTATAAGATATAA TAAAAATCCAT ATAAA ATGGATTTTTA AATGTTTAATAATTA TERM 725 721232 - 721218 - R 70 -4.3 -5.28561 | opp_overlap 721211 721218 721220, overlap 721212 721220 AAGATATAATAAAAA TCCAT ATAAA ATGGA TTTTTAAATGTTTAA rpsI 721663 - 721262 - | 30S ribosomal protein S9 TERM 726 721327 - 721341 + g 81 -10 -3.14463 | opp_overlap 721329 TCTTACGTTCTTTAA CACGTG AAT CACGTG TTACTAAACCAGCTT rplM 722129 - 721683 - | 50S ribosomal protein L13 TERM 727 722038 - 722018 - G 75 -7.7 -4.07568 | TCTTTCCTCTTAAAA TATCTGCTA CTT TAACAGATA AACGACCTAAAACTA TERM 728 723412 - 723395 - g 73 -8.5 -3.16088 | opp_overlap 723394, overlap 723394 ATACTTTATCAAAAG CTTTTGG AATG CCAAAAG ATGAATTAGAACATT UU578 722443 - 724023 + | membrane lipoprotein TERM 729 724165 - 724149 - f 79 -5.3 -5.40873 | overlap 724156 AATATAAAAATAAAA TTTTAAA TTT TTTAAAA AAGAGGTCGTTAAAA TERM 730 724201 - 724156 - f 82 -9.3 -3.81111 | opp_overlap 724168, overlap 724149 724168 AAATAAAATTTTAAA TTTTTTAAAAAAGAGGTCG TTAAAATG CGTCCTCTTTTTTAAAAGA ATGATAAGGTTGTAT TERM 731 724503 - 724513 + G 83 -4 -5.9873 | GCTCGTTTTATTTCT GTTT TGC AAAC TTTTTTTTATAATGG UU579 724218 - 725831 + | membrane lipoprotein TERM 732 726008 - 725989 - g 70 -3.6 -5.10077 | AAATATTGTAAAAAA TGCAATAT GAAA ACACTGCA TAAGGAAACAAGATA rpmG 725878 - 726024 + | ribosomal protein L33 TERM 733 726370 - 726356 - g 73 -5.8 -4.62085 | opp_overlap 726355 ATTTTGAAAAAATAA GTTTTA AAT TAAAAC GTTGGCTCTATGGCA UU580 726028 - 726528 + | hypothetical protein TERM 734 727205 - 727191 - g 70 -7.2 -3.53012 | CTTTTTTTGGTGAAA TTGCAA AAA TTGCAA AAATTGATCAAAACA nusG 726554 - 727330 + | transcription antitermination factor TERM 735 727345 - 727370 + T 73 -4.1 -5.46657 | opp_overlap 727337 ATAAAAATAAAAAAA CACTTTACA TTTTTGTT TGTAAGGTG TTTTTTATTAAAATG TERM 736 727508 - 727534 + T 87 -11.2 -3.52919 | opp_overlap 727507 727504, overlap 727510 GTAAAAAAGAATATT GATTTTAAAAAT AAA ATTTTTAAAATC TTATAGTTAAATACT TERM 737 727745 - 727791 + T 75 -8.5 -3.56881 | gap 1, opp_overlap 727745 727747, overlap 727743 727750 TTATCATAAACAAAA GTCGATGCATATAAGTTTTA CGAGCCTT TAAAACTTATATGCATT-AC TATTATATTATTTTT TERM 738 727791 - 727745 - T 81 -6.3 -5.02323 | gap 1, opp_overlap 727745 727743 727750, overlap 727747 TTATCATAAACAAAA GTCGATGCATATAAGTTTTA CGAGCCTT TAAAACTTATATGCATT-AC TATTATATTATTTTT TERM 739 727750 - 727787 + T 89 -11.7 -3.47232 | opp_overlap 727747 727745, overlap 727745 727743 ATAAACAAAAGTCGA TGCATATAAGTTTTA CGAGCCTT TAAAACTTATATGCA TTACTATTATATTAT deaD 729148 - 727817 - | ATP-dependent RNA helicase TERM 740 728181 - 728195 + g 75 -7.2 -4.18018 | CTACGTCCTGCACGG TGAATG TAT CATTCA TTTTCAGTAGGCAAA TERM 741 728554 - 728566 + g 79 -3.5 -5.64006 | overlap 728559 TATTAATAATCTTTG TATTT TTA AAATA TTTTTTTAATTGGAT dinF-1 730753 - 729149 - | MATE transporter family DNA damage inducible protein TERM 742 730689 - 730714 + g 93 -7.7 -5.23292 | opp_overlap 730694 ATGAAAATTTTATCA CCAAATTGATT TATA AACCAATTTGG TTTTATTTTCTGTGA dinF-2 732789 - 731227 - | MATE transporter family DNA damage inducible protein TERM 743 732905 - 732927 + r 76 -3.4 -5.77571 | opp_overlap 732896 732908, overlap 732908 ATTAAGTAAACAAAA AAAGGTTTAG ATG CAAAACCTTC TTTTTGTTTTTTAGT TERM 744 732908 - 732924 + r 70 -5.1 -4.8855 | opp_overlap 732896 732908, overlap 732905 AAGTAAACAAAAAAA GGTTTAG ATG CAAAACC TTCTTTTTGTTTTTT TERM 745 732924 - 732908 - R 86 -5.1 -6.01187 | opp_overlap 732908 732905, overlap 732896 AAGTAAACAAAAAAA GGTTTAG ATG CAAAACC TTCTTTTTGTTTTTT deoC 733585 - 732938 - | deoxyribose-phosphate aldolase TERM 746 733478 - 733490 + g 71 -4.9 -4.85396 | opp_overlap 733478, overlap 733479 AGGATTAATACAAAC TGAAT AAA ATTCA TTTTCTTCTGCTTCT tktA 735558 - 733597 - | transketolase TERM 747 735546 - 735528 - G 70 -7.4 -3.51708 | opp_overlap 735539 735540 TAGCCTGTAAAGCAA GTGAACGC ATT GCGTTAAC ATAACGATTCATATT ptsH 735851 - 735588 - | phosphohistidinoprotein-hexose phosphotransferase cls 737549 - 735951 - | cardiolipin synthase TERM 748 736660 - 736643 - G 74 -7.1 -4.27796 | opp_overlap 736635 736646, overlap 736635 GAATAAATTCTAAAA GAATTGT ATGC ACAATTC CTCCGGTTAAAATAT TERM 749 737620 - 737593 - R 80 -8.6 -4.10179 | opp_overlap 737593 737600, overlap 737583 737600 TATAATTTATATAAA TAAAAAATAGGG TTTC CCCTATTTTTAA TTATTAATGGCGGAA TERM 750 737593 - 737620 + r 77 -8.6 -3.71848 | opp_overlap 737583 737593 737600, overlap 737600 TATAATTTATATAAA TAAAAAATAGGG TTTC CCCTATTTTTAA TTATTAATGGCGGAA TERM 751 737613 - 737600 - R 100 -6.7 -5.76237 | opp_overlap 737593 737600, overlap 737593 TATATAAATAAAAAA TAGGG TTTC CCCTA TTTTTAATTATTAAT TERM 752 737600 - 737613 + r 83 -6.7 -5.00339 | opp_overlap 737600 737593, overlap 737593 TATATAAATAAAAAA TAGGG TTTC CCCTA TTTTTAATTATTAAT trx 738126 - 737806 - | thioredoxin topA 740188 - 738155 - | DNA topoisomerase I UU591 740982 - 740263 - | hypothetical protein UU592 741845 - 741024 - | ATP/GTP-binding protein TERM 753 741502 - 741515 + g 74 -5.3 -4.76191 | opp_overlap 741490 741502, overlap 741490 ATACCTACAAATTTA GGATT TATT AATCC TTTCTTTTGGTATAT UU593 742297 - 741857 - | hypothetical protein tdk 743005 - 742334 - | thymidine kinase gtp1 744118 - 743012 - | translation-associated GTPase TERM 754 744098 - 744068 - G 82 -8.4 -4.01158 | overlap 744094 AATTGTATTAAATAA TGTGGATTTACCAA CGT TTGGCAAACCAACA AGACCTGCTGATAAC tsr 745001 - 744129 - | fructose-bisphosphate aldolase rpoE 745488 - 745006 - | DNA-directed RNA polymerase subunit delta UU598 746753 - 745536 - | hypothetical protein TERM 755 745640 - 745650 + g 71 -2.6 -5.58522 | CAAGTTTTAATAATT TAAT ATC ATTA TTTTTGTTTTCTGTA TERM 756 745719 - 745741 + g 77 -9.4 -2.97995 | opp_overlap 745718 745717 ATTTGAAGTAATAGT TTCATAAAAA TAT TTTTTATGAA TAATCTTTTGATCTT TERM 757 745812 - 745789 - G 89 -9.8 -4.24204 | opp_overlap 745787 TATTCATATTCAAAA GTTACAAAAT CTTT ATTTTGTAAC CAATTTGTTGCTAAA gltX 748210 - 746762 - | glutamyl-tRNA synthetase UU600 748997 - 748200 - | hypothetical protein ksgA 749804 - 749031 - | dimethyladenosine transferase UU602 751017 - 749866 - | putative inner membrane protein translocase component YidC TERM 758 750483 - 750497 + g 72 -7.2 -3.71527 | opp_overlap 750459, overlap 750459 750477 TTTTTCCTTGAATTT CAGAAA TTC TTTCTG TTTGGATAGTTGCAC rnpA 751397 - 751056 - | ribonuclease p - protein component rpmH 751549 - 751403 - | 50S ribosomal protein L34