TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.356306 %AT, 3796634 nt, 31707 terms. Intergenic: 0.385495 %AT, H2T: 995555 nt, 6800 terms; T2T: 324112 nt, 5654 terms; H2H: 339668 nt, 3779 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|58579623|ref|NC_006834.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome (length 4941439) TERM 1 460 - 446 - g 74 -12.8 -3.29144 | opp_overlap 456 CCAGGCCGCGCAGAA GCCCGG CGA CCGGGC GCACAACCCGTTGCT TERM 2 1129 - 1114 - g 71 -4 -4.4727 | overlap 1116 1119 CCAACATCCAGAAAA CAGTAG CCGA CTACTA CGGCCTGCAGATGAA dnaA 42 - 1373 + | chromosomal replication initiation protein dnaN 1651 - 2751 + | DNA polymerase III subunit beta TERM 3 2742 - 2754 + F 79 -9.1 -4.16842 | TGTGGTGATGCCGCT GCGTC TCT GACGC TTTGTTCCACGTGGA TERM 4 2796 - 2779 - f 79 -14.1 -3.52073 | opp_overlap 2779 CGTGGAACACGAGAA GCCCGGC GAAC GCCGGGC TTTTTATTGGTTGTT TERM 5 2779 - 2796 + F 100 -14.1 -5.23396 | opp_overlap 2779 CGTGGAACACGAGAA GCCCGGC GAAC GCCGGGC TTTTTATTGGTTGTT TERM 6 3527 - 3539 + F 73 -3.3 -4.78572 | CGCTTTGGCATTTAT GAGAC CAA GTCAC TTTTGTTGATTCCGG TERM 7 4391 - 4416 + GF 70 -11.8 -3.16564 | overlap 4415 GCCACGTGTTGATCA GCGGCGGTGG TGAACC CCGCCGTCGC TTCCTGGACTGGGGG recF 4003 - 5109 + | recombination protein F TERM 8 7054 - 7031 - gf 70 -11 -3.35073 | gap 1 ACCAGCGCCAACGAA GCGATTGCGCG CAC CGCGC-ACCGC TACGACCCGGCTTTG gyrB 5045 - 7669 + | DNA gyrase subunit B TERM 9 7675 - 7720 + F 88 -17.5 -3.01712 | GGATATCTGAGCCAC CAGTCCCGACCAGCACATCGC GATC GCGGCGTGCTGGTCGGTGCGG TGTTCGCAGGACGAC TERM 10 8084 - 8074 - g 72 -8.2 -4.15044 | opp_overlap 8083, overlap 8075 CTGCTGCCGAACAAA CCGC CTC GCGG GCTGCCGCGCGCCGC TERM 11 8460 - 8411 - g 81 -12.7 -3.62096 | opp_overlap 8421 8429 CGGTATCAGCGGAAA CGGCCCTGCCGCCATCGCCCAGC TGTG GCTGGTGTATGGCAGCATGGGCG CGGCGTTCGCGTGGC TERM 12 8525 - 8555 + G 70 -2.4 -4.62872 | opp_overlap 8531, overlap 8528 8531 TGCTGCGCATGGCAT CAATAACGCCACCG CGC TGGCGGCGTTGTAC TTTTTCGGGCTTGGT TERM 13 8549 - 8531 - g 71 -9.5 -3.7282 | opp_overlap 8531 8528 8525 GCATGGCATCAATAA CGCCACC GCGCT GGCGGCG TTGTACTTTTTCGGG XOO0005 7737 - 8573 + | hypothetical protein TERM 14 8933 - 8922 - g 76 -2.2 -4.87893 | overlap 8926 AAGGCCAAGGAAAAA GTCA GTAC CGAC GTCAGGCAGAACGCC TERM 15 9539 - 9591 + G 95 -17.6 -3.92869 | gap 1, opp_overlap 9536 CCAGCAAGCCAAGCG GGCCGGGCGAGTGCCGCGTTGCGGC TAGA GCCGCTAA-CGGCACCTGCGCGGCC TTTGTCGATCAGTGC XOO0006 8760 - 9566 + | hypothetical protein TERM 16 9985 - 9973 - g 70 -4.7 -4.35524 | overlap 9974 GCCGCAAATCCAAAA GCGGC AAG GCCGA GGAGCTGTACCCGCA TERM 17 10715 - 10694 - g 91 -10.3 -4.67982 | opp_overlap 10698 GTTGACCGAAGAAAA GGAATACAA GCAG TTGTATTCC ATCTACGCCAACACC TERM 18 10761 - 10745 - g 88 -2.1 -5.26247 | overlap 10746 CGAAAACAAAGAAAA GGACGTC ATC GCCGTCA TCAATGAGGGTATGC TERM 19 10795 - 10782 - g 70 -2.3 -4.66609 | GAGGGTATGCAAAAA GGCAT CCTC AAGCC CGATTATCAGACATA XOO0007 9843 - 11036 + | hypothetical protein tonB 11190 - 11861 + | TonB protein TERM 20 12238 - 12251 + G 71 -8.1 -4.09685 | opp_overlap 12236 CCATGGAAGAGCAGC CGGCT TCCG AGCCG TTTTCCAAGATCGCG exbB 11946 - 12707 + | biopolymer transport ExbB protein exbD1 12754 - 13176 + | biopolymer transport ExbD1 protein exbD2 13180 - 13593 + | biopolymer transport ExbD2 protein TERM 21 13641 - 13660 + T 100 -15 -5.77988 | ATGACGCGACTGCAA CGCCACCG GAAA CGGTGGCG TTTTTTTATGTCTGT TERM 22 13842 - 13868 + T 73 -10.8 -3.56844 | opp_overlap 13837, overlap 13841 GCGCAATAACCGCTC GCCTGCGCGCAT GAA GTATGCGCAGGC TGTTTCGTTACTGCA pdxJ 14656 - 13889 - | pyridoxal phosphate biosynthetic protein PdxJ XOO0013 14978 - 14667 - | hypothetical protein cls 16471 - 15011 - | cardiolipin synthetase cbbFC 18128 - 17118 - | fructose-1,6-bisphosphatase TERM 23 18355 - 18333 - R 100 -11.3 -5.67063 | gap 1, opp_overlap 18332 18349 GCGAGCACAAAAAAA CCGGGAG-GC TTGC GCGCTCCCGG CTTGGTAACGTCGGC tyrB 19602 - 18400 - | aromatic amino acid aminotransferase TERM 24 19452 - 19477 + g 72 -6.8 -4.32034 | gap 1 GCTCGATCTTGTGCA CGGCGCGCAAC AGTGG GATGCGC-CCG TTTTCGTCGTAATAG yncD 19708 - 21882 + | iron transporter XOO0019 22503 - 23048 + | hypothetical protein XOO0020 24142 - 23162 - | IS1479 transposase lldD 25356 - 24190 - | L-lactate dehydrogenase TERM 25 24283 - 24293 + g 72 -6.8 -4.21922 | GCCGGTCAGCGTCAT TGCG ACG CGCA TTTCCTTTTCGATCA XOO0023 26069 - 25503 - | hypothetical protein TERM 26 26470 - 26513 + r 100 -18 -4.2828 | overlap 26471 CGGTGGCCCACCGTT GCGAGGCCTGCGGCAGCCGC TTGC GCGCCTGCCGCAGGCGGCGG TTTTCATGGATCCAC TERM 27 26471 - 26512 + r 100 -21.5 -3.16647 | overlap 26470 GGTGGCCCACCGTTG CGAGGCCTGCGGCAGCCGC TTGC GCGCCTGCCGCAGGCGGCG GTTTTCATGGATCCA XOO0026 27406 - 27068 - | transcriptional regulator XOO0027 27544 - 28761 + | trans-2-enoyl-CoA reductase kdgK 30411 - 29389 - | 2-keto-3-deoxygluconate kinase TERM 28 30088 - 30076 - G 71 -10.5 -3.59979 | CGGCGCCAGCGCAAA CGCCG AAT CGGCG CGGTCGTAGATCACT TERM 29 30181 - 30140 - G 82 -4.4 -5.00616 | gap 2, overlap 30144 30145 CCTGTGGTCAAAAAA TACAGGCC-CATGCGGC-CA TCCA CGCGCCGCACGTGGCGGGTA TCCACGTCATGCCGG iroN 30581 - 30979 + | TonB-dependent receptor TERM 30 31933 - 31944 + G 76 -2.2 -4.8622 | overlap 31931 GACGAGTTGCAGAGC TGCG AGGC TGCA TTTTTCATTGCCGCC XOO0030 31234 - 32202 + | putative transposase XOO0031 34293 - 32317 - | hypothetical protein TERM 31 34534 - 34549 + G 74 -4.6 -4.55697 | GGCGTTGGAGATCTC GCACTG GCCA CAGGGC TTTGTTTGTCCGCGT TERM 32 35267 - 35283 + G 74 -10.1 -3.70902 | opp_overlap 35239 35262, overlap 35268 CTGGCAGAGACGATG TGGCGGT TCA ACCGCCG TTTCGATCTGACCCG XOO0032 34382 - 35398 + | transposase XOO0033 36289 - 35897 - | IS1479 transposase XOO0034 36972 - 36337 - | hypothetical protein XOO0035 37971 - 37153 - | hypothetical protein TERM 33 37411 - 37354 - G 95 -15.7 -4.18494 | gap 3, opp_overlap 37366 CACGTTGACCGAAAA CTTCGCC-GCGACGCGCGACACCAGCGC GACCA GCGCCGGTG-CGCCC-TTGCTGGCGAAG CCATGCGCTGCCACG TERM 34 38436 - 38476 + G 100 -10.4 -5.14965 | gap 1 GTGCAGTCCGGCTAC CGCGATTCGC-CGTGCAAG GAGG CTTGCGCGCGCGGCTGGCG TTTTTTCCTGGGCAT TERM 35 38539 - 38515 - g 71 -10 -3.5764 | gap 1, overlap 38516 AACGCTATGTGGAAA CCGG-CGAGGG CGCG CCCTCGGCCGA TATGGGCATGTCCCA XOO0036 38076 - 38588 + | hypothetical protein proP 40250 - 39651 - | proline/betaine transporter XOO0039 41432 - 40464 - | transposase TERM 36 40493 - 40519 + g 71 -7.3 -4.18494 | gap 1, overlap 40493 CAACGCTGTTGAGGA C-CTCCTCGGAG AAGA CTTCGAGGGGCG TTTTGAATCCAAGTA trxA 42201 - 41929 - | thioredoxin TERM 37 42015 - 41996 - G 89 -12.8 -4.14511 | opp_overlap 41996 41994 41986 AACGTGACGCGAAAA GAGCGGCC AAGC GGCCGCCC TCTTCCATCTTCGAT atsE 42620 - 42222 - | AtsE TERM 38 42283 - 42301 + g 72 -8.8 -3.9941 | opp_overlap 42292 TCCTTGGCCAGATCG CCCACCAG ACG CTGCTGGG TTTGCTTGTGCAGCA XOO0042 43404 - 42712 - | hypothetical protein TERM 39 42870 - 42835 - G 75 -14 -3.02471 | gap 1 CGTCGAGCAGATACA GGCCGTCCAGCG-CCTG CAG CAGATCGCCGGACGGCA GCGGCGTGGCATACA TERM 40 43407 - 43357 - G 77 -11.6 -3.72576 | CTCGCGCGCAGCAAA GCGCAGCGCGCGCTGGAAGCCGTC CTC GGCCGCTTCCAGCGTGTGCAATGC ATGTACCAGCGCATC XOO0043 44137 - 43574 - | MutT-nudix family protein XOO0044 44160 - 44336 + | hypothetical protein XOO0047 45511 - 45822 + | hypothetical protein TERM 41 45899 - 45941 + T 75 -14.3 -2.79183 | gap 1, opp_overlap 45906 45914, overlap 45914 GCGGCATTGGCGTCG TAC-ATCACCGACAGACACC GCGC GGTGTCTGTCGGTGAGCGAA TGTGGTCCAGCTGCG TERM 42 45933 - 45906 - T 90 -20 -2.62184 | opp_overlap 45899 45914, overlap 45914 TGGCGTCGTACATCA CCGACAGACACC GCGC GGTGTCTGTCGG TGAGCGAATGTGGTC tnpA 47102 - 46077 - | transposase XOO0049 48223 - 47165 - | putative transposase XOO0050 48362 - 48643 + | hypothetical protein XOO0051 48636 - 48956 + | hypothetical protein TERM 43 48985 - 49003 + T 76 -10.2 -3.84719 | overlap 48986 48988 GACTGATGCATCTCC TGAGCCGC ACA GCGGCTCC TTTGCATTTCACCCT TERM 44 48986 - 49002 + T 74 -13.7 -2.90349 | overlap 48985 48988 ACTGATGCATCTCCT GAGCCGC ACA GCGGCTC CTTTGCATTTCACCC TERM 45 49018 - 49030 + T 74 -9.1 -3.90744 | CTTTGCATTTCACCC TCGGC ATT GCCGA TTCTTTCCGGGACCG tnp 50309 - 49347 - | transposase TERM 46 50626 - 50598 - g 81 -11 -4.08064 | gap 1, opp_overlap 50623, overlap 50623 AAGCGCTGTCCAAAA CGCTGACCTTGCC CGAT GGCAAGGAC-GCG TACCGCAACGCGTTC XOO0055 50378 - 50803 + | hypothetical protein TERM 47 50825 - 50857 + F 100 -21.4 -3.53012 | opp_overlap 50807 50831, overlap 50826 50831 GACTGCGCTGCACCC TGCAAACGCGCCGG CCCGT CCGGCGCGTTTGCG TTTAGCGGCCAGCAC TERM 48 50826 - 50856 + F 100 -22.7 -2.71712 | opp_overlap 50807 50831, overlap 50825 50831 ACTGCGCTGCACCCT GCAAACGCGCCGG CCCGT CCGGCGCGTTTGC GTTTAGCGGCCAGCA TERM 49 50831 - 50851 + F 91 -15.4 -3.84451 | opp_overlap 50807 50831, overlap 50826 50825 GCTGCACCCTGCAAA CGCGCCGG CCCGT CCGGCGCG TTTGCGTTTAGCGGC TERM 50 50851 - 50831 - f 86 -15.4 -3.55444 | opp_overlap 50826 50825 50831, overlap 50807 GCTGCACCCTGCAAA CGCGCCGG CCCGT CCGGCGCG TTTGCGTTTAGCGGC sulA 51004 - 51891 + | cell division inhibitor TERM 51 51954 - 51927 - f 76 -13.4 -3.1875 | gap 1 CAGACGGGAATCGAA CGGCGCGCCGGGC CTG GCCC-ACGCACCG CCTGGGCGTGCAGCA ygiY 52197 - 52514 + | two-component system sensor protein TERM 52 52977 - 52989 + T 70 -10.5 -3.61889 | opp_overlap 52973 52972, overlap 52985 AGCGTTACAACCTCA GCGCG CGA CGCGC TTTGCCGCCTTTTTG bpH1 53876 - 52974 - | histone H1-like protein TERM 53 53047 - 53075 + g 77 -8.8 -4.20783 | overlap 53034 TTGGCCACAGCACGC GTTGCCGGGGTC TTGGT GACCTTGGCGGC TTTCTTCAATGCGGT htrA 54067 - 55503 + | protease DO XOO0060 55596 - 55994 + | hypothetical protein TERM 54 56109 - 56074 - f 100 -19 -3.75169 | gap 1 CAGGACTGGACGAAA GCGTCCGCGCGGTCGGC GCT GCCGGCCGCGCA-ACGC TGAGCTCGGCCAAAG TERM 55 56115 - 56161 + F 86 -15.4 -3.57144 | gap 4, opp_overlap 56124 CGCGCAACGCTGAGC TCGGCCAAAGACACCAGCCG-CGC CTT GCGCCGGCTGGTGTC---GGCCGA TTTGCAACTGGCACG TERM 56 56155 - 56124 - f 100 -21 -3.53811 | gap 1, opp_overlap 56115 CTGAGCTCGGCCAAA GACACCAGCCG-CGC CTT GCGCCGGCTGGTGTC GGCCGATTTGCAACT XOO0061 56139 - 56483 + | hypothetical protein XOO0062 56480 - 56863 + | hypothetical protein XOO0063 57088 - 57459 + | putative transposase XOO0064 57425 - 58021 + | putative transposase hpaF 59901 - 58273 - | HpaF TERM 57 60323 - 60343 + r 100 -5.3 -5.4505 | ATCAAAGTGAAGAGG CTGTATCGC TTG GCGAATCAG TTTTTTCTTGCACAG TERM 58 60625 - 60600 - R 93 -19.1 -3.14564 | opp_overlap 60600 GCAGCGGCGCAGGAA CGTGCCTCCAG GCAC CTGGAGGCACG TTCATACGAACGTCG TERM 59 60600 - 60625 + r 93 -19.1 -3.14564 | opp_overlap 60600 GCAGCGGCGCAGGAA CGTGCCTCCAG GCAC CTGGAGGCACG TTCATACGAACGTCG hrpF 63341 - 60777 - | HrpF protein TERM 60 62663 - 62637 - G 72 -8.6 -4.09628 | overlap 62621 GATCGCAAAGAACAA TCGCGGGTCCTG TTT CAGGCCCTGCAA TGCAGCCTTCAGGTC XOO0069 65043 - 66038 + | putative ISXo8 transposase XOO0070 66179 - 66505 + | putative ISXo8 transposase XOO0071 67102 - 66620 - | putative transposase TERM 61 66889 - 66878 - G 76 -2.2 -4.8622 | overlap 66879 GGCGGCAATGAAAAA TGCA GCCT CGCA GCTCTGCAACTCGTC XOO0072 67436 - 67104 - | IS1479 transposase XOO4698 67590 - 67300 - | IS1479 transposase XOO0073 68726 - 67740 - | putative ISXo8 transposase XOO4699 69075 - 68314 - | transposase XOO4700 69423 - 69737 + | hypothetical protein TERM 62 70298 - 70286 - g 70 -4.7 -4.38154 | opp_overlap 70286, overlap 70287 70288 ACAGCGGGCACAAAA GCGGC ATT GCCGA TTGCCTACCAATGTC XOO0074 69734 - 71719 + | hypothetical protein TERM 63 71754 - 71806 + T 70 -12.8 -2.88579 | gap 1, opp_overlap 71772, overlap 71756 ATACTCAGGAGTGTT GTA-CACCGCTGCCACAGACGTCAC TGTC GTCGCGTCTGTGGCAGAGGTGGTGG TGTCTGGCAGCTTAG TERM 64 71756 - 71803 + T 87 -19.2 -2.6927 | opp_overlap 71772, overlap 71754 ACTCAGGAGTGTTGT ACACCGCTGCCACAGACGTCAC TGTC GTCGCGTCTGTGGCAGAGGTGG TGGTGTCTGGCAGCT TERM 65 71917 - 71948 + T 80 -5.6 -4.72497 | GCCGATTCCGCGCAC CGGCCGCGCCCGCC TGGC GGTAAGCGCAGTCG TTTTGTTGGTCGCTC hpaB 72604 - 72134 - | HpaB TERM 66 72400 - 72388 - G 77 -4.7 -4.6902 | GCAGAAGCCTAAAAA CGGTC AAT GTCCG CCCGGCAGGTGGTAA hrpE 72940 - 72659 - | hypothetical protein TERM 67 72973 - 72988 + r 84 -8.2 -4.45544 | overlap 72974 72986 72987 GTGAACGTGTAATGG TGCGCC TGTC GGCGCG TTTTGCTTGGTCGAA hrpD6 73263 - 73021 - | HrpD6 hrpD5 74211 - 73273 - | HrpD5 hpaA 75035 - 74208 - | HpaA hrcS 75292 - 75032 - | hypothetical protein hrcR 75977 - 75297 - | type III secretion system protein hrcQ 76932 - 75928 - | hypothetical protein hpaP 77618 - 76974 - | hrpC3 TERM 68 77145 - 77130 - G 73 -6.1 -4.42235 | opp_overlap 77130, overlap 77117 77131 AAGTCGCAAAAACAA CGTCG TCTGTG CGACG ACCTCTTGATCGATA TERM 69 77242 - 77215 - G 75 -10.6 -3.85698 | gap 1, opp_overlap 77223 TTGGCGTTGCAGAAA TCGGCCAC-TCGC AGC GCGATGTGGTCGA TCGCCATTTGGGCGC hrcV 79552 - 77615 - | HrcV TERM 70 78207 - 78246 + g 73 -13.6 -2.83255 | gap 1, opp_overlap 78195 78194, overlap 78197 AAGTGCGCCCGTGCA TGCAGGGGCGCGATGGCCT GCC GGGCCAGTGC-TCCCTGCA TGTCCTCCGTGTTCT hrcU 80817 - 79546 - | type III secretion system protein HrcU TERM 71 79752 - 79732 - G 84 -13.9 -3.57144 | opp_overlap 79731 CTGGTTATGCGCAAA GGCGCGCAG TTC CAGCGCGCC ATCGTCTACGCCCTT hrpB1 80840 - 81295 + | HrpB1 hrpB2 81326 - 81721 + | HrpB2 TERM 72 81761 - 81786 + G 72 -13.3 -3.07344 | overlap 81749 81749 GGTGCTGCTGGCGCT GCTGCTGTCTG CATG CAGTCAGCAGC TGTATTCCGGGCTCA hrpB3 81723 - 82484 + | HrpB3 hrpB4 82492 - 83121 + | HrpB4 hrpB5 83106 - 83807 + | type III secretion system protein HrpB hrcN 83797 - 85125 + | type III secretion system ATPase TERM 73 85557 - 85511 - g 79 -10.1 -4.07868 | overlap 85512 GTATACGCAGACAAA GCCGCCA-GTGCACGCCGCGCCC GAC AGGCGCAACGCG-ACGCGGCGGA GGAAGAAGACGCGAT TERM 74 85556 - 85512 - g 75 -13.6 -3.04239 | overlap 85511 TATACGCAGACAAAG CCGCCA-GTGCACGCCGCGCCC GAC AGGCGCAACGCG-ACGCGGCGG AGGAAGAAGACGCGA hrpB7 85118 - 85627 + | HrpB7 hrpB8 85624 - 86454 + | HrpB8 hrcC 86537 - 88354 + | hypothetical protein TERM 75 89062 - 89028 - T 85 -15.7 -3.47226 | ACAGGAACGAATGAA CCCGTAGGCTGCCGC ATGAA GCGGCAACCTGCAGG CCGTGGCCGGTAGGG hpa1 89512 - 89093 - | Hpa1 TERM 76 89383 - 89399 + g 81 -10.9 -4.09685 | opp_overlap 89374, overlap 89375 AGATGAGCTGGCACA GCAACTG GTC CAGTTGC TTTTCCGAGATGCCC TERM 77 89563 - 89593 + H 76 -9.7 -4.07885 | gap 1, opp_overlap 89561 89562 89575 TTTAGTATCAACAGC CGTGCCTAGACAGC GGTG GCTG-CGAGGCGCG TTTTGCGCCCCGATC hpa2 89888 - 90451 + | Hpa2 TERM 78 90756 - 90769 + T 76 -5.9 -4.65168 | AATCCCCGCTGTCCG CCGCC GCCT GGTGG TTTTTAGGATGTGCT TERM 79 90810 - 90862 + T 95 -20 -3.16564 | gap 1, opp_overlap 90812 CATAGAGCCATCACA CAGCT-GTCGCACGCGCACTGCCGG TGAA CCGACAGTGCGTGTGTGACCACCTG TTGCTGCACTAACCG TERM 80 90859 - 90812 - T 90 -18.4 -2.95774 | opp_overlap 90810 TAGAGCCATCACACA GCTGTCGCACGCGCACTGCCGG TGAA CCGACAGTGCGTGTGTGACCAC CTGTTGCTGCACTAA XOO0097 92468 - 90915 - | hypothetical protein XOO0099 93769 - 93566 - | putative transposase XOO0102 94539 - 94333 - | putative transposase XOO0103 95024 - 94683 - | hypothetical protein TERM 81 94862 - 94884 + g 72 -6.9 -4.25104 | gap 1 TGCTGCAGGTTCGAT CCGCC-GCGC CGCC GCGCTGGCCG TTTTCATCGCGCAAA TERM 82 97535 - 97515 - g 75 -8.1 -4.30576 | opp_overlap 97528 97532 CGCCGAGCACGAAAA GGTGCTGGC CGA GCCGGCGCC GTCGGTGTTCATCGA XOO0104 95104 - 97767 + | hypothetical protein XOO0105 98076 - 97786 - | hypothetical protein TERM 83 98462 - 98431 - g 100 -2.9 -5.86061 | overlap 98453 GCGCATTAAAAAAAA CGGCCCACAATCC ATCGGG AAATCGCGGGGCG GATGGAACACCAAAA XOO0106 98079 - 98525 + | transposase XOO0108 100681 - 98876 - | ABC transporter substrate binding protein TERM 84 99219 - 99256 + g 81 -2.8 -5.02074 | gap 3 ACCAGATGCTGCAAT TCCATCGCCTCGCTGGCCA GGT TGGC-GGCG-GAC-ATGGA TTTTTTCAGGCGTGC XOO0109 100841 - 101782 + | hypothetical protein TERM 85 102069 - 102097 + G 78 -4.4 -4.81249 | opp_overlap 102066 GCGCCGAACCGATCC GCGCGGGCGC AATGATCGG GCGCAGGCGC TTTTTGAGTTTGGGG XOO0110 101975 - 103339 + | hypothetical protein XOO0111 104964 - 103336 - | hypothetical protein TERM 86 105515 - 105541 + H 81 -12.2 -3.95584 | opp_overlap 105512 GGCGTTGAAGAAGGG CGGTCGACCGCG CGA TGCGCTCGGCCG TTTCATTCGTCACCA glgA 105597 - 107021 + | glycogen synthase TERM 87 107719 - 107737 + G 71 -10.2 -3.64703 | opp_overlap 107699 GGCCACCGCCTCGGT GGTGCCCG GCA CGGACACC TTTGCGTGGACCGAC glgB2 107066 - 109252 + | glycogen branching enzyme TERM 88 109393 - 109407 + G 71 -4.2 -4.57073 | CGCAGCGCGCTGCAG GCCG GGCAGGA CGGC TTTTTCAGCGCCGTG TERM 89 110151 - 110133 - g 81 -11.7 -4.07568 | TCTGGTGCTGGAAAA CGAGGCC AACCA GGCCTCG CAATTGCAACGTGGC XOO0114 109255 - 111012 + | maltooligosyltrehalose trehalohydrolase malQ 111009 - 112958 + | 4-alpha-glucanotransferase TERM 90 113544 - 113496 - g 93 -5.9 -5.28826 | gap 1, overlap 113497 113498 113527 113530 AAATTCCAGAAAAAA CCGCA-CTTGCGCAGTGGCTGC GCGACT ACAACGACGGCGCCAGGCGCGG CGATGGCCGCCTGCA TERM 91 113891 - 113869 - g 76 -9.8 -4.11216 | CCTGTATCTGGAAAA GATCCTCGCC CCC GGCGAGCACC TGCCGGCCGACTGGC TERM 92 114374 - 114390 + G 70 -13.7 -2.62263 | overlap 114348 114347 GCGCAGATCGCTTTG CGGCGCA TTC TGCGCCG TCGTGTGGAACAGCT glgY 112955 - 115558 + | maltooligosyltrehalose synthase TERM 93 117318 - 117302 - gf 70 -10.1 -3.54109 | overlap 117291 CGAAGGCAAGCACAA CCTCGCC AAC GGCGAAG ATGGCAGAGACGGCA glgX 115881 - 118043 + | glycogen debranching enzyme TERM 94 118287 - 118302 + GT 71 -4.6 -4.4009 | opp_overlap 118285 CACGATGAAACAGGC CGGCTC GCGC GAGGCG TTTTATCGCATCGAC XOO0118 118012 - 118692 + | hypothetical protein mauG 120555 - 119494 - | methylamine utilization protein precursor XOO0120 121812 - 120589 - | ISxac1 transposase XOO0121 123400 - 122018 - | putative ISXo8 transposase XOO0122 124772 - 123756 - | transposase TERM 95 123887 - 123871 - G 74 -10.1 -3.70902 | opp_overlap 123866, overlap 123872 CGGGTCAGATCGAAA CGGCGGT TGA ACCGCCA CATCGTCTCTGCCAG TERM 96 124620 - 124605 - G 74 -4.6 -4.55697 | ACGCGGACAAACAAA GCCCTG TGGC CAGCGC GAGATCTCCAACGCC XOO0123 124816 - 125631 + | Rhs family protein XOO0124 125619 - 126449 + | putative ISXo8 transposase XOO0125 126882 - 126436 - | putative transposase XOO0126 127298 - 126879 - | putative transposase XOO0127 127306 - 127731 + | putative ISXo8 transposase XOO0128 127747 - 128970 + | ISxac1 transposase XOO0129 128975 - 129214 + | putative ISXo8 transposase TERM 97 129815 - 129835 + F 80 -5.3 -4.83169 | CCAACGACCGTGGAA CTGCAGGCT ACC GGCGTGCGG TTTTTCTCGCGGGGT TERM 98 130278 - 130247 - g 91 -16.6 -3.55444 | GTTCGACGCTGCAAA CCCCGATCTTGGCC GGCT GGCCGAGATCGAGG CCGAGCAGCGCAAAT XOO4701 130137 - 130397 + | hypothetical protein TERM 99 131002 - 130985 - T 100 -12.7 -4.62069 | opp_overlap 130983 130981 CTTCGAGCGCAAAAA GTCGGCG CAAC CGCCGAC GATGTTCCTGGGGGT TERM 100 131102 - 131088 - T 78 -6.4 -4.57073 | overlap 131089 CAGCGGCTGCAAAAA CGCTGA CAG TCAGCA GGGGTTAAACGCCAG XOO4702 131348 - 131217 - | hypothetical protein TERM 101 132326 - 132342 + G 78 -13.7 -3.17714 | overlap 132316 TGACCCTGCACACGC GCGGCCA TCG TGGCCGC TTGCTGGCGATTTCG XOO0130 131683 - 133101 + | hypothetical protein virK 133389 - 133904 + | VirK XOO0132 134107 - 134514 + | hypothetical protein rhlE 136243 - 134954 - | ATP-dependent RNA helicase TERM 102 135132 - 135145 + g 72 -3.1 -4.65895 | gap 1 ACGCTGGTCGGCACA CG-CAG GCC CTGGCG TTTTTCAATCAGCCG XOO0134 136862 - 137842 + | IS1479 transposase pdhB 139201 - 138869 - | dihydrolipoamide acyltransferase XOO4703 139475 - 139191 - | transposase XOO0136 140219 - 139524 - | transposase pdhB 140510 - 140247 - | dihydrolipoamide acyltransferase TERM 103 141002 - 141033 + H 95 -15.1 -4.07687 | GCGTTCTATGAGCCG CGCCTGCCCTGCG ATGCCA CGCAGGTCGGGCG TTTTCGCGCGGCCAT TERM 104 141788 - 141800 + H 71 -4.8 -4.4773 | TGCGGTTTTGGCGTG CTGG AACTG CCAG TTTTCGTTACTCTAC XOO0141 141969 - 142430 + | IS1478 transposase XOO0145 142669 - 143253 + | IS1478 transposase TERM 105 143528 - 143539 + G 70 -2.2 -4.61231 | CCATGGTGCGTCTGG GACT GAAG GGTC TTTTTGCGCCTATGG XOO0146 143287 - 143646 + | IS1478 transposase TERM 106 144519 - 144490 - T 73 -3.4 -4.6971 | TAAAGTCCAACAAAA CGTGGTGAGCAG CATAAC CTGCACACACCG CATTCATATTAAGTA TERM 107 145692 - 145680 - T 73 -6.3 -4.30576 | CTGCGATCATTAAAA TTCCT CTA AGGAA CCTCTGCCGATCACA TERM 108 146453 - 146464 + T 74 -2.2 -4.8622 | overlap 146451 GACGAGTTGCAGAGC TGCG AGGC TGCA TTTTTCATTGCCGCC TERM 109 146876 - 146856 - T 100 -18.3 -4.15222 | ACCTTCCCTAATAAA GGCGGGCTC ATG GAGCCCGCC CAGCGCAACCTGATT XOO0148 148032 - 147325 - | putative transposase TERM 110 147597 - 147586 - G 76 -2.2 -4.8622 | overlap 147587 GGCGGCAATGAAAAA TGCA GCCT CGCA GCTCTGCAACTCGTC XOO0149 148298 - 148008 - | IS1479 transposase XOO0150 149245 - 148448 - | putative ISXo8 transposase TERM 111 149262 - 149248 - R 90 -8.6 -4.86731 | opp_overlap 149261 TGGTCTGAAACAAAA CCTGAT CCG ATCAGG GTGCCTCACTCATTG XOO4704 149509 - 149387 - | putative ISXo8 transposase XOO0151 150409 - 149537 - | putative ISXo8 transposase TERM 112 150336 - 150316 - G 78 -3.2 -4.93365 | overlap 150317 150318 TTCGATAACTAAAAA CCCGCTCC TCCTG GGAACGAA AGTTCTCAGACAATT XOO0152 151420 - 150452 - | transposase TERM 113 150481 - 150507 + g 71 -7.3 -4.18494 | gap 1, overlap 150481 CAACGCTGTTGAGGA C-CTCCTCGGAG AAGA CTTCGAGGGGCG TTTTGAATCCAAGTA TERM 114 153107 - 153081 - g 71 -7.3 -4.18494 | gap 1, overlap 153082 TACTTGGATTCAAAA CGCCCCTCGAAG TCTT CTCCGAGGAG-G TCCTCAACAGCGTTG XOO0153 152168 - 153136 + | transposase TERM 115 154475 - 154491 + G 72 -11.5 -3.53012 | GGCGAGATCGTCTCG CCGCTGG CCA CCGGCGG TTTCACCCGCACCGG acrE 153773 - 155026 + | acriflavin resistance protein TERM 116 155587 - 155556 - f 100 -2.9 -5.86061 | overlap 155578 GCGCATTAAAAAAAA CGGCCCACAATCC ATCGGG AAATCGCGGGGCG GATGGAACACCAAAA tptC 156004 - 156939 + | ABC transporter ATP-binding protein XOO0158 156952 - 158109 + | hypothetical protein XOO0159 158122 - 159432 + | hypothetical protein XOO0160 159987 - 159445 - | IS30 family transposase XOO0161 161128 - 160112 - | transposase TERM 117 160243 - 160227 - G 74 -10.1 -3.70902 | opp_overlap 160222, overlap 160228 CGGGTCAGATCGAAA CGGCGGT TGA ACCGCCA CATCGTCTCTGCCAG TERM 118 160976 - 160961 - G 74 -4.6 -4.55697 | ACGCGGACAAACAAA GCCCTG TGGC CAGCGC GAGATCTCCAACGCC XOO0162 161818 - 161309 - | hypothetical protein TERM 119 161718 - 161698 - G 75 -14.7 -2.78384 | CCTCGGTGCACGAGA CCCATCGCC AAC GGCGACGGG ATGTCGGGAGGTTAG TERM 120 161791 - 161811 + g 81 -13.3 -3.57144 | GTATTAGCCGCCCTC CCGACGCAG GCA TTGCGTCGG TTTGCACCTGCGAAC TERM 121 161861 - 161839 - R 85 -3.4 -5.30686 | overlap 161840 AACAGGTACAAAAAA CCCACC GGTTTGACGGA GGTGGG TACCGCTACGTGAGG XOO0163 162384 - 162013 - | hypothetical protein TERM 122 162070 - 162108 + g 79 -6 -4.64334 | gap 3, overlap 162073 162093 GTTGTCCATGCAGCA CGG-GGCACAGGCCGCGCC CACC GG-GCGG-CTGCGCCGTCG TTTTGTTAGCCGCTT XOO0164 162716 - 162438 - | hypothetical protein XOO0165 163391 - 162735 - | hemolysin III TERM 123 165485 - 165467 - g 70 -5.9 -4.29738 | overlap 165470 CTACACGCATGAAAA CATCGGC TACGG GCCGGTG AATCTTCCGGATCAG XOO0166 163473 - 166070 + | ATP-dependent RNA helicase TERM 124 167352 - 167334 - g 77 -11.6 -3.70902 | opp_overlap 167344 TCTTCGACACCGAAA CCACCGGC CTG GCCGGGGG CACCGGCACCCGCGC XOO0167 166067 - 167893 + | hypothetical protein TERM 125 168116 - 168076 - T 76 -13.4 -3.1364 | gap 2, overlap 168068 CAGGGAAGCATGCAA CGCAGTGATGGCGCAGCGCC GGC GGCGCTGTGCC-T-ACTGCA AAGACATCACGCACG TERM 126 168172 - 168119 - T 100 -19.8 -3.59979 | gap 2, overlap 168121 TGTGCCTACTGCAAA GACATCACGCACGTGCCTGCGATCGA TTCG TCGCTTGCAGGCACGTGCG-GATG-C GTCAGCATGTAAAGT TERM 127 168171 - 168121 - T 100 -23.5 -3.38046 | gap 1, overlap 168119 TGCCTACTGCAAAGA CATCACGCACGTGCCTGCGATCGA TTCG TCGCTTGCAGGCACGTGCG-GATG CGTCAGCATGTAAAG TERM 128 168234 - 168192 - T 79 -11.3 -3.85909 | gap 1, overlap 168186 GCATGTAAAGTGAAA TCGCACGCCACGGCAC-GTG GACG CATTGCACCGCAGCGTGCGA CATCGTCGCCATCGC avrBs2 170538 - 168382 - | avirulence protein TERM 129 170573 - 170542 - R 72 -4.2 -4.652 | overlap 170543 170544 AAATGACCTCAAAAA CGCGGCGGGCGGTC AGTA GACCGCACGGCATA TGACAATTCGCAACC xylR 171901 - 170717 - | xylose repressor-like protein TERM 130 174155 - 174121 - H 71 -12.9 -3.05384 | gap 1 GTGCTGGTCACCCAA CCGCGCAATACCGACC GGCC GGTCCGCAT-GCGCGG CGCCGAACTCGGCGC XOO0172 174647 - 175432 + | hypothetical protein XOO0173 177128 - 175746 - | hypothetical protein TERM 131 176167 - 176151 - G 91 -10.1 -4.63928 | ACAGCACTGCAAAAA CGGCACT TCC AGCGCCG CACGAAATTCCACGG TERM 132 176449 - 176437 - G 77 -4.7 -4.62471 | overlap 176438 TGCAATGCCGAAAAA CGCGG CGA CAGCG CATCGATCACCGCAC TERM 133 177446 - 177477 + H 89 -11.4 -4.36914 | opp_overlap 177432 ACCGATTCCGAGCAC CGGCCGCGCCCGCC TGGC GGTGAGCGCAGTCG TTTTGTGAGCCGCGC XOO0174 178009 - 178341 + | hypothetical protein XOO0175 179931 - 178678 - | hypothetical protein TERM 134 179727 - 179784 + g 84 -17.5 -2.7263 | gap 1, overlap 179734 TGGCCTGCGCCACGG C-GGCCGCGCTTGCCACGGCGGCCGGGG CCA CAGCGGCCGCCGTGGCCACCGCAGCAAG CTTTCCCGCGGTACT TERM 135 179734 - 179785 + g 75 -12 -3.54741 | overlap 179727 CGCCACGGCGGCCGC GCTTGCCACGGCGGCCGGGGCCAC AGCG GCCGCCGTGGCCACCGCAGCAAGC TTTCCCGCGGTACTG TERM 136 180148 - 180120 - g 77 -12.3 -3.61715 | CACGCGGCCGAACAA GCCGCTGCGCCCG CGC CGGATGCAGCGCC GGAAGCGCCACCGAT XOO0176 179988 - 180368 + | hypothetical protein TERM 137 181614 - 181594 - g 79 -14.7 -3.02511 | TCTATGGTCTCAACA CCGAGCCGT GGG ACGGCCCGG CCGGCATCGTCGCCT gltB 180570 - 185042 + | glutamate synthase subunit alpha TERM 138 185047 - 185021 - f 93 -21 -2.87564 | overlap 184994 CGAGTCGCTGACAGA GTCACTCAGGCG GGC CGCCTGAGTGAC GGGATTGGGGAGTCG gltD 185237 - 186718 + | glutamate synthase subunit beta XOO0179 186952 - 187362 + | ISxac1 transposase tnpA 187366 - 187815 + | transposase XOO0181 187846 - 187959 + | IS30 family transposase XOO0182 188975 - 187956 - | transposase TERM 139 188057 - 188045 - G 81 -9.1 -4.25104 | CTGCGGCCAGCAAAA GCTGG GCA CCAGC CGGGTCAGATCGAAA TERM 140 188823 - 188808 - G 74 -4.6 -4.55697 | ACGCGGACAAACAAA GCCCTG TGGC CAGCGC GAGATCTCCAACGCC tra8 188987 - 189469 + | remnant of a transposase gene protein XOO0184 189450 - 190334 + | ISxac1 transposase XOO0185 191208 - 190609 - | putative ISXo8 transposase XOO0186 191928 - 191212 - | putative ISXo8 transposase XOO0187 193400 - 192024 - | IS1478 transposase TERM 141 193454 - 193442 - R 71 -4.8 -4.4773 | GTAGAGTAACGAAAA CTGG CAGTT CCAG CACGCCAAAACCGCA kduI 194407 - 193970 - | 5-keto-4-deoxyuronate isomerase TERM 142 194759 - 194741 - R 71 -13.8 -2.52464 | opp_overlap 194736 194732 GGGTGCTCCAAGGCA CGCGCGGC AAT GCCGCGCA AGCTGTGCCTTCTCG XOO0190 195938 - 194802 - | LacI family transcription regulator TERM 143 195671 - 195633 - G 77 -14.5 -2.80016 | gap 1, overlap 195630 GCCGATCAGGAACGA GCGCCGGA-ACGCCAGCC CGCG GGCGAGCGGGTCCGGCGC GTAGCCGACCTGGCG XOO0191 196132 - 196004 - | xylosidase; arabinosidase XOO4705 197003 - 196779 - | hypothetical protein glgB1 199608 - 197425 - | glycogen branching enzyme TERM 144 198665 - 198647 - G 73 -5.9 -4.3739 | overlap 198656 198657 CAGCGGTCCACAAAA CGCGCGA AACCG TCGGGCG TGCCGAAGCGCGCGG TERM 145 199419 - 199404 - G 73 -11.8 -3.34398 | opp_overlap 199391, overlap 199402 GGTCGCCGGCAAACA GGCCCG GCTC CGGGCC AGCCTCCAGCGCGAT TERM 146 201202 - 201185 - R 71 -9.1 -3.68619 | opp_overlap 201184 TCCAACGTAGGCAAA TGCGGCA GCAG CGCCGCA CTTCCGTCGGCATCG TERM 147 201328 - 201316 - R 74 -6.2 -4.4715 | CTCGAACGCATAAAA GCCG AACGG CGGC ACCGTGAGCAGGTAG XOO0197 206084 - 202968 - | alpha-amylase TERM 148 204602 - 204624 + g 93 -3.3 -5.42259 | gap 1, overlap 204605 CCTGCACGTCGACCG GCAGCACCGT ATTG GCGGCGC-GC TTTTTTTCCAGATCC TERM 149 205188 - 205158 - G 81 -11 -3.99775 | opp_overlap 205175, overlap 205162 ATTGATCAATAACAA GGAAGGCAAGCCGC CCA GCGGCTCGACCGCC ACTGCGGTCAGTCCG TERM 150 205184 - 205162 - G 74 -11.2 -3.62857 | opp_overlap 205175, overlap 205158 ATCAATAACAAGGAA GGCAAGCCGC CCA GCGGCTCGAC CGCCACTGCGGTCAG TERM 151 206122 - 206105 - H 78 -10.5 -4.00042 | opp_overlap 206105 CTCCTCAGCAAACAA CGGCGCG CAGG CGCACCG TCACTCGGGAAGCCA TERM 152 206713 - 206684 - H 71 -8.5 -3.88946 | gap 1, opp_overlap 206684 206683 GACGTTACACAACAA GCCACGACGCGTAG GCG CTGCACG-CGCGGC ATTGATTCCAAGGAT TERM 153 206898 - 206915 + H 75 -4 -4.79949 | overlap 206893 206899 GCTGGGCATAGGCCG CCGGCG TCATTC CGCCGA TTGTTTTTTTGGGGC TERM 154 207896 - 207869 - H 70 -12 -3.12668 | gap 1 GAGGCGGAGATGCAA GCCCATGTGG-GC CAT GCGCCGCATGGGC GCTCAGGCGGCAACG TERM 155 208141 - 208156 + G 74 -4.6 -4.55697 | GGCGTTGGAGATCTC GCGCTG GCCA CAGGGC TTTGTTTGTCCGCGT XOO0200 208130 - 208567 + | transposase XOO0201 208545 - 208823 + | transposase TERM 156 208876 - 208892 + G 74 -10.1 -3.70902 | overlap 208877 TGGCAGAGACGATGT TGGCGGT TCA ACCGCCG TTTCGATCTGACCCG XOO0202 208816 - 209007 + | transposase TERM 157 209875 - 209899 + F 76 -5.7 -4.59773 | opp_overlap 209878 GCGTATTTTCCCCAA CGACGATTCGG CGC TCAAATCGTTG TTTTTGGCCGTGCGC TERM 158 210395 - 210380 - f 74 -4.6 -4.55697 | ACGCGGACAAACAAA GCCCTG TGGC CAGCGC GAGATCTCCAACGCC TERM 159 211716 - 211728 + G 74 -4.8 -4.4773 | TGCGGTTTTGGCGTG CTGG AACTG CCAG TTTTCGTTACTCTAC XOO0208 211686 - 212465 + | IS1478 transposase XOO0209 213180 - 214631 + | putative ISXo8 transposase comM 216238 - 214718 - | competence related protein TERM 160 214975 - 215025 + g 100 -26.8 -2.78463 | TGGGCAGCGCTCCGC GCGCAAGCTGGCGTTGCCGCGCGG CGA CCACGCGGCAACGCACGCTGGCGC TGTCCTCGCCGAGGT XOO0214 216533 - 216255 - | hypothetical protein TERM 161 216420 - 216449 + g 74 -11.4 -3.62522 | CTTGCCCAGCCCGGC CTGCAGCGCGCC CTTGAA GGTGCTCTGCAG TTCTTCGCGCGATTG glnB 216723 - 217061 + | nitrogen regulatory protein P-II TERM 162 217155 - 217185 + F 86 -7.5 -4.67982 | gap 1, opp_overlap 217128 GCCGATGCCGAGCAC CGGCCGTCGCGCCT GACG AGGCGTG-CAGTCG TTTTGTTAGCTGCCC TERM 163 217944 - 217933 - g 70 -5.8 -4.25104 | opp_overlap 217915, overlap 217934 CCGGGGTCACCAAAA TGGC GACC GCCA CGCGCTTGCCTGCCA XOO0215 217611 - 219659 + | hypothetical protein TERM 164 220747 - 220689 - g 78 -2.9 -4.89477 | gap 2, overlap 220692 CCGTCAACAACAAAA GCAGCAGGTCGGCACGCAAGGCGCCACTG CGT CGGCAGCGCAGT-CGTCGCGCCCTGC-GC AAGCGGGCACCGGGG TERM 165 220890 - 220841 - g 84 -17.1 -2.80816 | gap 1 CGGTGACCGAGCAGA CGTCGGCAGCGGCCACGCCGGCAG CGC CTGCCTACGT-ACCGCCGCCACCG CGCGAAGAAGAGCAA XOO0217 220579 - 221391 + | hypothetical protein TERM 166 221436 - 221409 - f 77 -12.6 -3.59979 | opp_overlap 221412, overlap 221412 CGGGTTGACGGCAAA GACGGGCGGGCG GCAG CGCTCGCCCTTC TGCGTCATGCCGCAT TERM 167 221412 - 221433 + F 84 -15.1 -3.37796 | opp_overlap 221409 221412 GTTGACGGCAAAGAC GGGCGGGCG GCAG CGCTCGCCC TTCTGCGTCATGCCG XOO0218 221584 - 222195 + | hypothetical protein speE 223469 - 222612 - | spermidine synthase TERM 168 223549 - 223589 + H 95 -20.6 -3.14211 | opp_overlap 223571 CGCCGGATGGGGGTC GGGTACAGCCGC-GTGCAGC GAA GCTGCGCAGCGGCTG-ACCC TTGCTCGGCCCCGAT TERM 169 225170 - 225156 - g 77 -12.8 -3.34013 | GAGCGCTTGAACGAA GCGCCG CAG CGGCGC GGCATCATCGCCGAC speA 223707 - 225593 + | arginine decarboxylase TERM 170 225942 - 225925 - f 88 -7.7 -4.91109 | overlap 225927 CGCCGATGACAAAAA GACGACG ACCA CGTCATC GTGCTGGCTAATGAG TERM 171 225943 - 225927 - f 73 -8.7 -4.08042 | overlap 225925 CCGATGACAAAAAGA CGACGAC CAC GTCATCG TGCTGGCTAATGAGG XOO0221 226173 - 227549 + | IS1478 transposase TERM 172 227615 - 227588 - f 95 -18.4 -3.41602 | opp_overlap 227589, overlap 227589 GGTAGTTCAGGACAA CGCAGGGCGGCC GCAA GGCCGCCCTGCT TGCGTGTGGGCCAAC TERM 173 227589 - 227614 + F 100 -21.9 -3.12351 | opp_overlap 227589 227588 GTAGTTCAGGACAAC GCAGGGCGGCC GCAA GGCCGCCCTGC TTGCGTGTGGGCCAA TERM 174 227614 - 227589 - f 100 -21.9 -2.64747 | opp_overlap 227589, overlap 227588 GTAGTTCAGGACAAC GCAGGGCGGCC GCAA GGCCGCCCTGC TTGCGTGTGGGCCAA TERM 175 227819 - 227809 - f 71 -4.6 -4.45201 | GGGCAGAAAAAAAGA GACC TTC GGCC TGCCAGCAACGCATC TERM 176 230551 - 230582 + GF 81 -13 -3.59979 | opp_overlap 230550 230539 CCAGCCCTACAGCAT CACCTTGGACGACG GCCG CGTCGTGCAAGGCG TTTCCGATGCCAACG XOO0222 227954 - 230677 + | Vgr-related protein TERM 177 230674 - 230656 - gf 93 -17.4 -3.31461 | CATCGAGGTCCACAA GCCGCCGC TGG GCGGCGGC TGACACTCCTCCCGC XOO0223 230619 - 232898 + | hypothetical protein XOO0224 232895 - 234586 + | hypothetical protein TERM 178 236266 - 236215 - g 72 -12.9 -3.15544 | GCGGATGTGGACCAA GCTGCTGCGCGGCGGCAAGCC GGTTGCCGTG GGCCTGCCGCCGCGGCACATC CCGCTGCGCATGGAG TERM 179 237032 - 237018 - g 76 -5.6 -4.4891 | opp_overlap 237017 CTTACTACTACAAAA CCGGGA AAT TTCCGG ATGTCGTGTCTAAGG XOO0225 234908 - 237109 + | hypothetical protein XOO0226 237106 - 238794 + | hypothetical protein gidA 241232 - 239328 - | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA TERM 180 239834 - 239820 - G 74 -12.8 -3.28712 | TTGCTTGGCCGAGAA GCGCGC CCA GCGCGC GTCGTCGACCAGACC TERM 181 241461 - 241496 + H 100 -17 -5.30575 | overlap 241462 241465 GTGCGATGGGGTAGC GTAAGGGTCGGTAGTC GGGG GACTGCCGACCCTTAA TTTTTTGCGTTTTTC TERM 182 241462 - 241495 + H 100 -20.5 -3.75905 | overlap 241461 241465 TGCGATGGGGTAGCG TAAGGGTCGGTAGTC GGGG GACTGCCGACCCTTA ATTTTTTGCGTTTTT TERM 183 241465 - 241492 + H 100 -17.8 -3.95677 | overlap 241462 241461 GATGGGGTAGCGTAA GGGTCGGTAGTC GGGG GACTGCCGACCC TTAATTTTTTGCGTT TERM 184 241571 - 241604 + H 100 -25.5 -3.28924 | opp_overlap 241571 241579, overlap 241579 GCAACATCGAATAAA CACAGAAAGCCCCGG CATG CCGGGGCTTTCTGTG TTGTAGGCGCCGATA TERM 185 241604 - 241571 - H 100 -25.5 -4.254 | opp_overlap 241571 241579, overlap 241579 GCAACATCGAATAAA CACAGAAAGCCCCGG CATG CCGGGGCTTTCTGTG TTGTAGGCGCCGATA TERM 186 241579 - 241596 + H 93 -14.1 -4.24786 | opp_overlap 241571 241579, overlap 241571 GAATAAACACAGAAA GCCCCGG CATG CCGGGGC TTTCTGTGTTGTAGG TERM 187 241596 - 241579 - H 100 -14.1 -4.33576 | opp_overlap 241579 241571, overlap 241571 GAATAAACACAGAAA GCCCCGG CATG CCGGGGC TTTCTGTGTTGTAGG TERM 188 243290 - 243312 + G 72 -11.2 -3.53012 | TGATCACCCTGGCCG CGGTGCTGGC CGA GCCGGCACGG TTTGCCGGGCGCCGG ilvA 242431 - 243390 + | threonine dehydratase XOO0231 244035 - 244454 + | hypothetical protein TERM 189 244685 - 244630 - T 100 -26.2 -3.29829 | CAGACCCGTGTAGAA GCGCGCTGGCGCGCGATTGAGCGTCA CCGG TAACGCCGCATCGCGCGCAAGCGCGC TCCTACACGGTTGGT aspH 245612 - 244707 - | aspartyl-asparaginyl beta-hydroxylase bioC 246745 - 245861 - | biotin synthesis protein XOO0234 247591 - 246809 - | oxidoreductase TERM 190 247303 - 247325 + g 71 -9.1 -3.72324 | gap 1, opp_overlap 247303 247302, overlap 247308 CCCACTGACGAAAAT CGCCGGGCGG CGGG CCGCCTG-CG TTGTTGATCAAGATG bioH 248463 - 247636 - | biotin biosynthesis protein TERM 191 248001 - 247985 - GH 70 -2.1 -4.65916 | overlap 247986 TCCAGCGCAAGAAAA CGCTCCA GGG TGCCGCG ATAGTCGCGCGACAA XOO0237 248890 - 248561 - | hypothetical protein XOO0236 248449 - 249132 + | IS1404 transposase TERM 192 249865 - 249901 + GF 75 -11.6 -3.59979 | overlap 249861 GCCGAGCGAGGCCGG GACGACTGCGC-CGCGGT TTA AGCGCGCGCGCGG-CGTC TTTGCCCTGCGCGCC XOO0238 249086 - 250300 + | hypothetical protein mdoD 250363 - 251967 + | glucan biosynthesis protein D XOO0240 253508 - 252132 - | sensor histidine kinase TERM 193 252871 - 252892 + g 72 -8.6 -4.15788 | overlap 252888 CCCAGTTCGCTGCGT GCGCGCCG CGATTC CAGCGCGC TTTCTTCGGCGCGTT tdk 254457 - 253828 - | thymidine kinase TERM 194 255651 - 255688 + G 95 -14.9 -4.0174 | gap 1 GTTGCTGCGGAGATT TCGTTCCTTGGCACC-GC CAA GCAGGTGCCGTGGAGCGA TTTCTGCATTCTGTT rep 254664 - 256640 + | ATP-dependent DNA helicase XOO4706 257140 - 257274 + | hypothetical protein XOO0245 258881 - 258027 - | hypothetical protein TERM 195 258610 - 258620 + g 70 -2.4 -4.65895 | GGGTACGCATCCGGC GTGG TGG CCTC TTTTTCGATCAGACA TERM 196 258734 - 258744 + g 77 -4.6 -4.62336 | overlap 258727 AAGGATATGCCGATC CGCT GCC GGCG TTTTTCCACTGCGGT TERM 197 259746 - 259722 - g 75 -7.8 -4.21812 | gap 1, overlap 259707 259708 CGGCAGCGAAAAGAA CTGCCGCCGCC AGCT GGCCG-GGCAG AAGTACCGCGTGCTG lppC 258979 - 259989 + | acid phosphatase TERM 198 260493 - 260513 + G 75 -8.1 -4.22652 | opp_overlap 260481, overlap 260494 GAAGCCGGCCCGATC CGCCGCGCC ACC GGCCCGGCC TTTTCGATCGTCTGC pyrF 259986 - 260717 + | orotidine 5'-phosphate decarboxylase TERM 199 260863 - 260877 + T 73 -8.5 -4.08216 | GCCACTCATTGTCCA CCGGG CTTGC CCCGG TTTTCGAAGGGATCG TERM 200 260887 - 260909 + T 100 -9.1 -5.41143 | opp_overlap 260890 CCCCGGTTTTCGAAG GGATCGCGC CTTGT GCCCGATCC TTTTTTTGGGCCGTC prnA 262600 - 261071 - | tryptophan halogenase TERM 201 262680 - 262625 - R 93 -8 -5.14563 | overlap 262627 262640 262644 262671 262676 TTCCTGAGCAAAAAA CAGCCGACGGACACACGAACGGGGCC AACT GGCCCCGTTCGAACGACCACATGCCC GTGTCGGCGCATGTG TERM 202 262678 - 262627 - R 89 -12.8 -4.20707 | overlap 262625 262640 262644 262671 262676 CCTGAGCAAAAAACA GCCGACGGACACACGAACGGGGCC AACT GGCCCCGTTCGAACGACCACATGC CCGTGTCGGCGCATG TERM 203 262665 - 262640 - R 93 -20.5 -2.91582 | overlap 262627 262625 262644 CAGCCGACGGACACA CGAACGGGGCC AACT GGCCCCGTTCG AACGACCACATGCCC TERM 204 262661 - 262644 - R 77 -14.1 -3.32993 | overlap 262640 262627 262625 CGACGGACACACGAA CGGGGCC AACT GGCCCCG TTCGAACGACCACAT TERM 205 262696 - 262671 - R 72 -14.1 -2.70932 | gap 1, overlap 262627 262625 262676 GCCCCGTTCGAACGA CCACATGC-CCG TGT CGGCGCATGTGG CGATGCACACGCATC XOO0249 265967 - 262710 - | OmpA-related protein XOO0250 269079 - 266041 - | OmpA-related protein XOO0252 270296 - 269244 - | LacI family transcription regulator XOO0253 270703 - 271674 + | hypothetical protein plsB 271674 - 274334 + | glycerol-3-phosphate acyltransferase TERM 206 276053 - 276027 - T 71 -9.5 -3.7948 | gap 2, opp_overlap 276022, overlap 276028 GTAACAGCGAGCAAA GCC-TCTC-CCCC GTC GGGGCGAGAAGGC AAGGCTTGTGCGCCC XOO0258 276371 - 276153 - | hypothetical protein XOO4707 276890 - 277153 + | IS1404 transposase TERM 207 277942 - 277919 - f 90 -2.2 -5.40474 | overlap 277922 277923 277934 ACCGCCCCAAAAAAA CAATCGGCGC AATG ACGCCGGCGG CCTATGCCCAGCAGT TERM 208 277939 - 277922 - f 78 -4.7 -4.79949 | overlap 277919 277923 277934 GCCCCAAAAAAACAA TCGGCGC AATG ACGCCGG CGGCCTATGCCCAGC XOO0264 278011 - 278568 + | hypothetical protein TERM 209 278636 - 278599 - f 76 -13.3 -3.53012 | gap 1, opp_overlap 278609 TCCTGCTGGGCGAAA GGGCAGGACTGGCGCGCC ACC GGCGCGCCTG-CCTTCAC GTGCCCACGCTGCAA TERM 210 278609 - 278627 + F 83 -17.4 -2.53876 | opp_overlap 278599 CGAAAGGGCAGGACT GGCGCGCC ACC GGCGCGCC TGCCTTCACGTGCCC XOO0265 278931 - 279416 + | rhamnogalacturonan acetylesterase TERM 211 279560 - 279596 + T 100 -18.6 -4.07885 | opp_overlap 279533 279531, overlap 279581 279582 CACCCACTTCAGCCG CGCTACCGCCGCCGCC CGTCT GGCGGCGGCGCAGGCG TTTTGCCAGCCGCTC XOO0266 280640 - 279996 - | hypothetical protein TERM 212 280383 - 280420 + g 71 -13.3 -3.02043 | gap 1 GGTGAGTTTTGCCAG CACCCGCGC-GCTGCGGC GTC GCCACAGCAGCGCGGGCA TGTTGAGCAGGCCTT TERM 213 280558 - 280533 - G 72 -9 -3.9461 | opp_overlap 280535 280537, overlap 280537 TGCCTTGAACAATAA TCGATGCGCC TCGATG GGCTCATCGA TGCGGATGCTGTTGG TERM 214 280733 - 280763 + rH 75 -11.9 -3.62522 | GCTTCGCCACCACGC CGTGCCG-CGGCGTG CAG CA-GCCGGCGGCGCG TTATTCCCGCAGTTG phhA 281671 - 280781 - | phenylalanine 4-monooxygenase XOO0268 281649 - 282281 + | AsnC family transcriptional regulator XOO4708 282299 - 282406 + | hypothetical protein tra8 284338 - 284174 - | remnant of a transposase gene protein XOO0273 285059 - 284367 - | IS1478 transposase blc 285850 - 285317 - | outer membrane lipoprotein; lipocalin XOO0275 286085 - 287020 + | putative transposase XOO0276 287346 - 287233 - | putative transposase TERM 215 288442 - 288418 - g 72 -6.9 -4.21194 | CTGCAGTATCCAAAA GCGCCCGCCCG CGC CGGTCTGGCCC CAATGCAACGTCACC XOO0279 288000 - 288497 + | putative ISXo8 transposase yahK 289679 - 288666 - | alcohol dehydrogenase egl 290033 - 291106 + | cellulase TERM 216 291153 - 291124 - f 73 -10.7 -3.64822 | opp_overlap 291126, overlap 291126 AGCGGCGCAGGCAAA GAGTGGTCGCAAC CAGT GTTGCGGCCACTT TTTTGTCATTGCCTT TERM 217 291126 - 291151 + F 100 -15.5 -5.37345 | opp_overlap 291124 291126 CGGCGCAGGCAAAGA GTGGTCGCAAC CAGT GTTGCGGCCAC TTTTTTGTCATTGCC TERM 218 291151 - 291126 - f 76 -13.3 -3.40597 | opp_overlap 291126, overlap 291124 CGGCGCAGGCAAAGA GTGGTCGCAAC CAGT GTTGCGGCCAC TTTTTTGTCATTGCC TERM 219 291231 - 291200 - f 73 -12.9 -3.14132 | CCTGCTTCGGAGCAA GGCTGCCCGCCGC TGGCTC GCTGCGGGCAGCA GAAGGCAGAGATAAT TERM 220 291596 - 291640 + F 75 -12.2 -3.56643 | gap 1, overlap 291600 AGCTGCCTTCGCCCG CGATGTGGAGCACGCCATCGC CCAG GAGATGGTGTGTGCCAC-TCG TTTGAAGCATGTGCA TERM 221 291600 - 291637 + F 70 -12.7 -2.91322 | overlap 291596 GCCTTCGCCCGCGAT GTGGAGCACGCCATCGC CCAG GAGATGGTGTGTGCCAC TCGTTTGAAGCATGT TERM 222 291894 - 291918 + G 76 -5.6 -4.48713 | gap 1, overlap 291891 291892 291896 CTCACACCCGTACGC GCCGGC-CGCG TTGC CGCGCGCTGTC TTTGTTATTGCTGGC egl 291869 - 292921 + | cellulase TERM 223 293351 - 293323 - f 75 -3.8 -4.79223 | gap 1, overlap 293327 CCATACGACGAAAAA TCGACAGCGTGGA CACA CCCACGCGG-CAA TTGCGCGAACATGGC egl 293570 - 294700 + | cellulase TERM 224 294718 - 294728 + F 88 -8.2 -4.68545 | opp_overlap 294716, overlap 294721 TCAGCCACAAGGACG CCGC AAA GCGG TTTTGTCTGTTGAGT TERM 225 295882 - 295854 - g 71 -7.4 -4.18494 | gap 1, overlap 295855 TACTTGGATTCAAAA CGCC-CCTCGAAG TCTT CTCCGAGGAGGCC CTCAACAGCGTTGCG XOO0285 295312 - 296043 + | transposase XOO0286 296024 - 296413 + | hypothetical protein XOO0287 296579 - 296827 + | hypothetical protein TERM 226 298857 - 298839 - g 72 -6.6 -4.21194 | opp_overlap 298843 298844, overlap 298844 CCTGATCACTGAAAA CACCAGCG CCG CCCCGGTG CGTTTCACCCAGGCG XOO0288 297121 - 299283 + | transglycolase; epimerase TERM 227 300905 - 300932 + F 81 -13.4 -3.63073 | gap 1, overlap 300909 GCGCACCGGTCTGGT CAGCCTGGCCGGC ATC GCCGGCCCG-CTG TTGTTCGCCAATGTG TERM 228 300909 - 300929 + F 71 -13.9 -2.63252 | overlap 300905 ACCGGTCTGGTCAGC CTGGCCGGC ATC GCCGGCCCG CTGTTGTTCGCCAAT XOO0291 301111 - 301797 + | hypothetical protein aphB 301794 - 303698 + | phytochrome-like protein TERM 229 303892 - 303870 - T 74 -12.6 -3.30124 | CGCCAGGCCCCAGAA CGCCGCGCCG ATC CGGCCCAGCG TCAGCCCGGAGGCGG TERM 230 304112 - 304086 - T 76 -13.6 -3.14944 | opp_overlap 304082 304105 GATCACCACATGGAA CGTCCCGGCGCT CAT AGCGCCGTGCCG GATCTTCGTGCGCTT TERM 231 304701 - 304676 - T 84 -3.9 -5.1675 | gap 1, overlap 304679 GCAGCCACCAAAAAA GCACCGATG-GC CTC GCGCAACGGCAC CCCGGCCGCGCTGCC TERM 232 305306 - 305288 - T 85 -10.2 -4.37711 | TGACGAAATGTAAAA GCCGGCTA TGA TGGCCGGC TAGCTACACGGAAAG TERM 233 305500 - 305485 - T 78 -3.2 -5.08601 | overlap 305487 TGACGGCAAGAAAAA GCCC GCTATAAT GGGC GGCTCGCTTCGACGG TERM 234 305596 - 305631 + T 74 -10.4 -3.72576 | GGTAATTTGTGCGGA CGCCTGCAGGAAGGAT GATT GTCCATCTTGCAGACG TTTAATCAAAAAGCA TERM 235 306153 - 306166 + T 72 -4.5 -4.63218 | GTGAAGAAGGCCTTC GGGTT GTAA AGCCC TTTTGTTGGGAAAGA TERM 236 308072 - 308057 - T 82 -6.2 -4.83169 | ATGGCTTTAGAAAAA CAATCT GGAA AGATTG GCCATAGAAGGTGAT TERM 237 310782 - 310761 - T 70 -8 -4.07568 | opp_overlap 310761 CTTCCCTTCGCAAAA GCCTGCAC CTGTGT GTGCAGAC TTTTGAAGAGAAGCA TERM 238 310948 - 310979 + T 100 -20.4 -4.04927 | opp_overlap 310952, overlap 310952 CCAGGGGCTTTACCC GAAACCCTCTATCC AAAT GGATAGAGGGTTTC TTCTTTACTGATTAG TERM 239 310975 - 310952 - T 86 -15.4 -3.59979 | opp_overlap 310948 310952 GGGCTTTACCCGAAA CCCTCTATCC AAAT GGATAGAGGG TTTCTTCTTTACTGA TERM 240 310952 - 310975 + T 100 -15.4 -4.60258 | opp_overlap 310952, overlap 310948 GGGCTTTACCCGAAA CCCTCTATCC AAAT GGATAGAGGG TTTCTTCTTTACTGA XOO0295 311511 - 311035 - | IS1404 transposase XOO0297 312545 - 312186 - | transposase TERM 241 312393 - 312378 - G 74 -4.6 -4.55697 | ACGCGGACAAACAAA GCCCTG TGGC CAGCGC GAGATCTCCAACGCC XOO0298 312837 - 312577 - | putative ISXo8 transposase TERM 242 313690 - 313706 + G 73 -9.3 -3.90744 | CGTGATTTCATTAGC CCGGACG GTG CGCCCGG TTATTTCGAACAGGA mutM 312883 - 313833 + | formamidopyrimidine-DNA glycosylase XOO0300 315232 - 314180 - | putative transposase TERM 243 314950 - 314914 - G 80 -15.3 -3.05844 | gap 1, opp_overlap 314940 TGCTCGATTGCAACA GCGTGCCGGCACGCAA GGTGGT TTG-ATGCCGGCACGC CCGGCATTGGTAGTA TERM 244 315603 - 315572 - g 100 -2.9 -5.86061 | overlap 315594 GCGCATTAAAAAAAA CGGCCCACAATCC ATCGGG AAATCGCGGGGCG GATGGAACACCAAAA XOO0301 315241 - 315666 + | transposase XOO0303 316058 - 317521 + | IS1478 transposase TERM 245 317779 - 317760 - T 100 -15 -5.14626 | opp_overlap 317760 ATCAGGAAAAGAAAA GCCCGGGA TCGC TCCCGGGC TTCTACATGCATCAC TERM 246 317760 - 317779 + T 82 -15 -3.36878 | opp_overlap 317760 ATCAGGAAAAGAAAA GCCCGGGA TCGC TCCCGGGC TTCTACATGCATCAC vacJ 318872 - 317814 - | lipoprotein XOO0306 319173 - 318883 - | hypothetical protein yrbC 319825 - 319163 - | toluene tolerance protein yrbD 320388 - 319822 - | toluene tolerance protein yrbE 321134 - 320385 - | toluene tolerance protein yrbF 322093 - 321134 - | toluene tolerance protein XOO0311 322313 - 322600 + | hypothetical protein XOO0312 323200 - 322619 - | acetyltransferase XOO0313 324210 - 323194 - | transposase TERM 247 323325 - 323309 - G 74 -10.1 -3.70902 | opp_overlap 323304, overlap 323310 CGGGTCAGATCGAAA CGGCGGT TGA ACCGCCA CATCGTCTCTGCCAG TERM 248 324058 - 324043 - G 74 -4.6 -4.55697 | ACGCGGACAAACAAA GCCCTG TGGC CAGCGC GAGATCTCCAACGCC XOO0314 324991 - 324242 - | putative transposase TERM 249 325931 - 325905 - g 71 -7.3 -4.18494 | gap 1, overlap 325906 TACTTGGATTCAAAA CGCCCCTCGAAG TCTT CTCCGAGGAG-G TCCTCAACAGCGTTG XOO0315 324992 - 325960 + | hypothetical protein TERM 250 326388 - 326357 - g 100 -2.9 -5.86061 | overlap 326379 GCGCATTAAAAAAAA CGGCCCACAATCC ATCGGG AAATCGCGGGGCG GATGGAACACCAAAA XOO0316 326005 - 326451 + | transposase XOO0318 327310 - 326834 - | putative transposase XOO0319 327647 - 327276 - | putative transposase XOO0320 327755 - 328978 + | ISxac1 transposase XOO0321 329023 - 329394 + | putative transposase XOO0322 329360 - 329869 + | putative transposase TERM 251 329932 - 329901 - T 100 -21.7 -3.73107 | TTAGTAAATCCCAAA TTCCTCGGCCGCG ATTGGG CGCGGCCGAGGAA GATCAATGCGTCGCT XOO0323 331266 - 330031 - | transposase TERM 252 331357 - 331374 + r 81 -4 -4.96028 | overlap 331352 331358 GCTGGGCATAGGCCG CCGGCG TCATTC CGCCGA TTGTTTTTTTTGGGG TERM 253 331828 - 331851 + r 72 -4.5 -4.59773 | gap 1, opp_overlap 331827 GTGGGCCGCAGCAAC GGCGCACGCT CGCCT AGCG-GCACC TTTTTACGCGTGCGG XOO0326 332411 - 332142 - | IS1404 transposase XOO0327 332665 - 333093 + | hypothetical protein aroD 333191 - 333553 + | 3-dehydroquinate dehydratase XOO4709 333534 - 333761 + | hypothetical protein TERM 254 334021 - 334050 + T 90 -17.9 -3.01712 | opp_overlap 334011 334008 334026 334040 CAGCACCCACCGGCA CGACACTGCCGCC CGAA GACGGCAGTGTCG TGTTCCAGACAGGAC XOO0329 335598 - 334069 - | polyvinylalcohol dehydrogenase TERM 255 337089 - 337058 - R 100 -2.9 -5.86061 | overlap 337080 GCGCATTAAAAAAAA CGGCCCACAATCC ATCGGG AAATCGCGGGGCG GATGGAACACCAAAA idnK 338136 - 337549 - | gluconokinase TERM 256 339324 - 339334 + G 77 -8.2 -4.26188 | opp_overlap 339323 339324, overlap 339317 CGCTGGGGCCGAAAT CGCC ATT GGCG TTTTCGATGTATGCC ynaJ 338285 - 339673 + | cation symporter TERM 257 339763 - 339789 + G 74 -2.1 -4.82901 | overlap 339764 TACGCGCTCTATAGC CCCACCGCCAT GCCCA ATGCCGGCGGC TTTTTGTGGAACCGC ndvB 339670 - 342075 + | NdvB protein TERM 258 342136 - 342173 + T 76 -11.3 -3.74519 | gap 1, opp_overlap 342137 342140, overlap 342137 CAATGGTTGCCAAGA AGCAG-CTGGAGAGCGTC CTG GATGCTCTCCAGCCCGCC TTTCGTCAGCGTGTT TERM 259 342172 - 342137 - T 85 -14.8 -3.61894 | gap 1, opp_overlap 342136 342137, overlap 342140 AATGGTTGCCAAGAA GC-AGCTGGAGAGCGTC CTG GATGCTCTCCAGCCCGC CTTTCGTCAGCGTGT TERM 260 342137 - 342172 + T 77 -14.8 -2.84229 | gap 1, opp_overlap 342137 342140, overlap 342136 AATGGTTGCCAAGAA GCAG-CTGGAGAGCGTC CTG GATGCTCTCCAGCCCGC CTTTCGTCAGCGTGT TERM 261 342168 - 342140 - T 87 -17.5 -2.93073 | opp_overlap 342137 342136, overlap 342137 GGTTGCCAAGAAGCA GCTGGAGAGCGTC CTG GATGCTCTCCAGC CCGCCTTTCGTCAGC XOO0335 344941 - 342179 - | hypothetical protein TERM 262 345646 - 345689 + G 73 -13.7 -2.89683 | gap 1 GGCGTGGTGGGGCGA CCGCCGTCCGCTGTACCCGG AGCGG CCGTG-GCTGCGGCCGGCGG TCTATAGCCTGGCAT TERM 263 346021 - 346051 + G 73 -11.8 -3.36803 | gap 1, opp_overlap 346020, overlap 346016 GACCGGGCATAGCAG CGCCGGGCGCGGC ATCTTC GCCGA-CCCGGCG TTGTACGTGGCATTG TERM 264 346285 - 346302 + G 73 -6.3 -4.3898 | gap 1, overlap 346288 TTCGGTGGGCTTCAT CTC-GCAG ACG CTGCTGAG TTTTCTGGCGGTGAT TERM 265 346668 - 346693 + G 78 -13.3 -3.43676 | gap 1, overlap 346678 GTGGCAGCGCCGATG CACGCGCGGCGG TGG CC-TCGCGCGTG TTGTGGATTCGTCGC TERM 266 348968 - 348956 - g 71 -9.1 -3.72576 | CGCTTGCTGACCAAA CCGGT GAA ACCGG CATCGCTACGTGCGT XOO0336 345569 - 349018 + | two-component system sensor protein TERM 267 349176 - 349231 + T 70 -11.9 -3.14931 | gap 3, opp_overlap 349166, overlap 349179 GATAACGCCTCATCG CACCCAGGTGCGCTGCTACGGGAGCCGC CGT GCG-CTTACGTGGCGGCGC-CCAGG-TG TTCGTACAGAATCAC TERM 268 349179 - 349229 + T 80 -14.7 -3.1372 | gap 2, opp_overlap 349166, overlap 349176 AACGCCTCATCGCAC CCAGGTGCGCTGCTACGGGAGCCGC CGT GCG-CTTACGTGGCGGCGC-CCAGG TGTTCGTACAGAATC XOO0337 349909 - 349211 - | hypothetical protein TERM 269 349865 - 349825 - G 80 -13.9 -3.31144 | opp_overlap 349824 TGGGCACGCTCACAA CGGCATGCGCCCGCGCCAA CCG TCGTCGTGCACGCATGCCG CTGGTCTCGCCAGAC kdgR 351198 - 350272 - | transcriptional regulator TERM 270 351591 - 351606 + GH 76 -10.4 -3.85817 | GGCCTTGTTCGTGAT CGCCAG CGGG CTGGCG TTTCTGGAAACCACT TERM 271 351930 - 351950 + GH 71 -9 -3.68886 | gap 1 GGATGCCGATGCCGG CGTG-GCGC CAAA GCGCGCACG TTTCAGTGAATTGCT fucP 351112 - 352530 + | fucose permease XOO0340 352533 - 352892 + | hypothetical protein TERM 272 353695 - 353726 + G 95 -15.1 -4.07687 | GCGTTCTATGAGCCG CGCCTGCCCTGCG ATGCCA CGCAGGTCGGGCG TTTTCGCGCGGCCAT TERM 273 354692 - 354703 + G 70 -2.2 -4.61231 | CCATGGTGCGTCTGG GACT GAAG GGTC TTTTTGCGCCTATGG XOO0341 353329 - 354810 + | IS1478 transposase TERM 274 355104 - 355119 + G 74 -4.6 -4.55697 | GGCGTTGGAGATCTC GCGCTG GCCA CAGGGC TTTGTTTGTCCGCGT TERM 275 355837 - 355853 + G 74 -10.1 -3.70902 | opp_overlap 355832, overlap 355838 CTGGCAGAGACGATG TGGCGGT TCA ACCGCCG TTTCGATCTGACCCG XOO0342 354952 - 355968 + | transposase TERM 276 356322 - 356297 - f 76 -11.2 -3.71649 | gap 1 CCTGTAAATGCCAAA CGGCTACTGCC ACCCA GGCAG-AGCCG GGGGAACTCCCTCGA XOO0343 356794 - 358956 + | hypothetical protein TERM 277 359052 - 359002 - T 86 -7.7 -4.7497 | gap 2, overlap 359015 GCGATGCATCAAAAA CGACG-CGA-GCAAACGGGATGG TGCAAAG CCATCCCGTCTGGATCATCGCCG GCATTCGCGTGCGTC TERM 278 359037 - 359015 - T 74 -10.6 -3.75437 | overlap 359002 AACGACGCGAGCAAA CGGGATGG TGCAAAG CCATCCCG TCTGGATCATCGCCG TERM 279 359052 - 359082 + T 100 -19.8 -3.68569 | GTCTGGATCATCGCC GGCATTCGCGTGCG TCG TGCACGCGAGTGCC TTATTCGGTCAATCC dcp 361251 - 359083 - | peptidyl-dipeptidase TERM 280 359770 - 359755 - G 71 -11.8 -3.18681 | opp_overlap 359756, overlap 359756 GTCGAAGCTCAGCAA CGCCGG CTGG CCGGCG GCCGGCTTGGTGAAG TERM 281 359756 - 359776 + g 71 -11.8 -3.18681 | opp_overlap 359755 359756 TCGAAGCTCAGCAAC GCCGGCTG GCCGG CGGCCGGC TTGGTGAAGTTGCAC TERM 282 360351 - 360372 + g 74 -5.1 -4.56775 | gap 1 GGCGCTGGATGGTCT GGCGGGTGTC GTT GGCATC-GCC TTTTTCCGCGCGCGT TERM 283 361550 - 361527 - R 71 -13.8 -2.61274 | overlap 361526 GGGATTTCAATGAAT GGCGCGGCTT TCGC ATGCCGCGCC GCGCTGCACCAGGAC XOO0345 362518 - 361889 - | acyltransferase XOO0346 362952 - 362521 - | hypothetical protein XOO0347 363009 - 363587 + | hypothetical protein XOO0348 364555 - 363683 - | pseudouridylate synthase TERM 284 364508 - 364547 + g 75 -15 -2.74563 | GTGCGGTTGCTGCGC GCTACCCACGCAGCTGAT GCCT ACCTGCTGTGTGGGTGGC TGCTTCACGTCTCAC XOO0349 365049 - 364660 - | hypothetical protein TERM 285 365215 - 365183 - R 91 -17.7 -3.13164 | GCCGCAACCAGGCAA CCAGCAGCGCTGCCG AAC CGGCACCGCCGCTGA TCCAGCTCCACACCG ubiB 366836 - 365163 - | putative ubiquinone biosynthesis protein UbiB TERM 286 365746 - 365721 - G 70 -11.1 -3.34398 | gap 1, overlap 365719 GGGCCGGGTGAAATA CGGCTCGCACAC CGA GCGCGCG-GCCG CTTCCAGTTCGTCGA XOO0351 367477 - 366833 - | hypothetical protein XOO4710 367681 - 367487 - | hypothetical protein TERM 287 368832 - 368786 - g 89 -16.7 -3.27259 | CACACAGACGACCAA CTGCTG-CGCAGCGCGGTCGAGC TAC ACT-GACCACGCTGCGGCAGCTG CACGCCGTACACATG ddl 367712 - 368815 + | D-alanyl-alanine synthetase A TERM 288 369291 - 369276 - T 100 -4.6 -5.46629 | AATATCTGAAAAAAA CGGCTG TAAT CAGTCG CCCCTGAAAAACCCC ddlA 369866 - 369309 - | IS1478 transposase XOO0354 370633 - 369839 - | IS1478 transposase XOO0355 370751 - 370620 - | IS1478 transposase TERM 289 370788 - 370799 + r 81 -2.2 -5.15634 | TTAGGGGCGACTTAT TGCA GCTA TGCG TTTTTTCCTGGGATG TERM 290 371491 - 371510 + r 100 -10.7 -4.77567 | opp_overlap 371489 GTCTTGCCACCAACG GCCCAGC CAATGC GCTGGGC TTTTGTTCTGGACGT TERM 291 371744 - 371775 + r 95 -11.4 -4.63932 | TGCCGTTCCGGGTGC CGGCCGCGCCCGCC TGGC GGTGAGCGCAGTCG TTTTGTTAGCCGCTC TERM 292 372470 - 372446 - R 74 -14.3 -2.52896 | overlap 372434 TCACTGGGCAACGCA CGCCACGGGCA CCC TGCCCGTAGCA GATACAGCACTGGCG XOO0357 372865 - 372668 - | transposase XOO0358 373461 - 372769 - | transposase TERM 293 373078 - 373109 + gH 100 -2.9 -5.86061 | overlap 373077 TTTTGGTGTTCCATC CGCCCCGCGATTT CCCGAT GGATTGTGGGCCG TTTTTTTTAATGCGC TERM 294 373747 - 373735 - H 84 -4.1 -5.11613 | ACATCATGGAAAAAA TCGGT AAA ACCAA GCTATTTGCAGGACT TERM 295 373947 - 373967 + H 74 -2.3 -4.89852 | opp_overlap 373906 ATGTCCCCGCATTGC CGGACGACG CGA CCCCGCCCG TTTTTATCGGTGTGC TERM 296 374466 - 374453 - g 89 -2.3 -5.40072 | opp_overlap 374458 374459, overlap 374454 374455 TGCGCTGCAAAAAAA TGGTG AGCG CACCG GCGCGTTCGTGCGCT XOO0360 374190 - 374543 + | IS1404 transposase XOO0363 374592 - 374693 + | IS1389 transposase XOO0364 374753 - 374860 + | IS1404 transposase TERM 297 375250 - 375233 - g 78 -4 -4.79949 | overlap 375234 375245 GCCCCAAAAAAACAA TCGGCG GAATGA CGCCGG CGGCCTATGCCCAGC XOO0365 374866 - 375303 + | IS1404 transposase XOO0366 375887 - 375387 - | putative ISXo8 transposase XOO0367 375931 - 376266 + | putative ISXo8 transposase XOO0368 376251 - 377312 + | putative ISXo8 transposase TERM 298 377528 - 377512 - f 74 -10.1 -3.70902 | opp_overlap 377507 377524, overlap 377513 CGGGTCAGATCGAAA CGGCGGT TGA ACCGCCA CATCGTCTCTGCCAG TERM 299 378263 - 378248 - f 74 -4.6 -4.55697 | ACGCGGACAAACAAA GCCCTG TGGC CAGCGC GAGATCTCCAACGCC XOO0374 379515 - 380615 + | putative transposase XOO0376 380668 - 381903 + | transposase apbA 383271 - 382330 - | 2-dehydropantoate 2-reductase TERM 300 383355 - 383378 + r 100 -13.8 -5.26119 | CCTCGGTCGGCATCA GGCTCTGGCG GAAT CGCCGGGGCC TTTTGTTTTTAAGGG XOO0378 384175 - 383387 - | hypothetical protein yadH 384951 - 384139 - | permease yadG 385943 - 384948 - | ABC transporter ATP-binding protein poxF 386046 - 386807 + | phenol hydroxylase czcD 387893 - 386892 - | heavy metal transporter TERM 301 387951 - 387937 - gH 71 -10 -3.60805 | overlap 387917 ACAGGGTATCTTAAA TACCCC TGG GGGGTA TACGGCAGTGGCGCA TERM 302 388054 - 388040 - gH 83 -7.8 -4.58283 | GAAGGGCTGGAAAAA GCCCTG GCC CAGGAC GTGGAATGCACCGCG XOO0384 387893 - 388231 + | hypothetical protein XOO4711 388412 - 388513 + | hypothetical protein XOO0385 388711 - 389304 + | hypothetical protein XOO0386 389301 - 389501 + | transcriptional regulator TERM 303 389817 - 389871 + GF 71 -12.1 -3.17723 | opp_overlap 389814 389846 389847, overlap 389819 GGCAACATCGAAGCG CAGTGCGCGAGCTT-GCGCGTGCCGGA GAA TCCGGC-CGCGCCGAGCGGGCGCAGTA TTGCGTTGAAGATCG TERM 304 389819 - 389869 + GF 80 -14.7 -3.15056 | opp_overlap 389814 389846 389847, overlap 389817 CAACATCGAAGCGCA GTGCGCGAGCTT-GCGCGTGCCGGA GAA TCCGGC-CGCGCCGAGCGGGCGCAG TATTGCGTTGAAGAT XOO0387 389598 - 391163 + | cysteine proteinase natA 391081 - 391941 + | sodium ABC transporter ATP-binding protein TERM 305 392150 - 392167 + G 75 -6.9 -4.36914 | opp_overlap 392150 GCTCGGTCGCAGCAA CGCGCCG AATC TGGTGCG TTTTCTGGCCGCGCA natB 391938 - 393131 + | ABC transporter sodium permease TERM 306 393514 - 393483 - T 100 -23.2 -3.31792 | opp_overlap 393483 393490, overlap 393490 CCACCACCGCCACAA CGCAAAAGCCCGCA TCGC TGCGGGCTTTTGCG TTTCCATGTCATCAA TERM 307 393483 - 393514 + T 100 -23.2 -3.727 | opp_overlap 393483 393490, overlap 393490 CCACCACCGCCACAA CGCAAAAGCCCGCA TCGC TGCGGGCTTTTGCG TTTCCATGTCATCAA TERM 308 393507 - 393490 - T 95 -12.7 -4.3208 | opp_overlap 393483 393490, overlap 393483 CGCCACAACGCAAAA GCCCGCA TCGC TGCGGGC TTTTGCGTTTCCATG TERM 309 393490 - 393507 + T 95 -12.7 -4.36595 | opp_overlap 393490 393483, overlap 393483 CGCCACAACGCAAAA GCCCGCA TCGC TGCGGGC TTTTGCGTTTCCATG XOO0390 394563 - 393541 - | TonB-like protein TERM 310 394424 - 394476 + g 71 -12.5 -3.27298 | overlap 394426 394429 GTCGCAGGCGTGGGT GCCAATGCTGCCGGCGTGGCGCCGG TGG CTGGCGCGGTGGTGGCGGCCTTGTC TTCCTGCTTGGAGCA TERM 311 394426 - 394474 + g 78 -13.7 -3.20227 | overlap 394424 394429 CGCAGGCGTGGGTGC CAATGCTGCCGGCGTGGCGCCGG TGG CTGGCGCGGTGGTGGCGGCCTTG TCTTCCTGCTTGGAG TERM 312 394429 - 394471 + g 71 -9.6 -3.73813 | overlap 394426 394424 AGGCGTGGGTGCCAA TGCTGCCGGCGTGGCGCCGG TGG CTGGCGCGGTGGTGGCGGCC TTGTCTTCCTGCTTG prnA 396274 - 394703 - | tryptophan halogenase XOO0392 397292 - 396279 - | Pass1-related protein sapC 398034 - 397282 - | SapC TERM 313 398079 - 398123 + r 89 -17.1 -3.14564 | overlap 398066 GGCCGGGCGCAACGG CCGTGTCCATTCCCCGACCGC CAG GCCGCCGGGGAATGGATGGGG TTACTGCAGCGATGC iroN 401241 - 398167 - | TonB-dependent receptor XOO0395 401328 - 401774 + | transposase gst 402387 - 403076 + | glutathione S-transferase TERM 314 403201 - 403185 - f 77 -13.7 -3.28712 | opp_overlap 403167, overlap 403161 CCGCCGGGGCGAGAA GGCACGG CGT CCGTGCC ACTGGCGTGCGTGCC TERM 315 403804 - 403792 - g 82 -6.9 -4.60041 | overlap 403794 AGCGATGTCGAAAAA GCCCG CCG CGAGC GCCAACGCATCGCCG TERM 316 404785 - 404763 - g 76 -9.8 -4.18018 | CGGCGCGATCGAAAA GCGTTCCGTC ACC AACGGCACGC ACGCAGCCAGTTTTG XOO0398 403501 - 405738 + | dipeptidyl peptidase IV TERM 317 405834 - 405865 + F 95 -11.4 -4.63932 | TGCCGTTCCGAGCAG CGGCCGCGCCCGCC TGAC GGTGAGCGCAGTCG TTTTGTTAGCCGCTC TERM 318 406532 - 406507 - g 72 -6.9 -4.30576 | gap 1, overlap 406516 406518 GCGCTACGAGGAAAA GCTG-AGCAACA CCG CGCTGCTGCAGC CCACCCAGCGCGAAG TERM 319 407078 - 407116 + G 80 -13.7 -3.36749 | opp_overlap 407100 GCGCCGCACTTCCTG CCGGCCCCGCTGATCGG CAATA CCGGCCAGCAGGGCCAG TTCGTGTTGCCGCTG XOO0399 405890 - 407737 + | hypothetical protein TERM 320 407805 - 407762 - T 100 -27.7 -5.40072 | opp_overlap 407757 TCGGGTGCAAAAAAA CAGGGCGCGATAGAAGGCT GCAAAT AGCCTTCCATCGCGCCCTG ACGCATTGATGCGGG XOO0400 408295 - 407837 - | hypothetical protein hemB 408960 - 409952 + | delta-aminolevulinic acid dehydratase TERM 321 409958 - 409987 + T 71 -12.8 -3.02144 | AACGCGCTGAGCGCG AGCGCCTGCGGC CATGTC GCCGCAGGTGCA TCTTAGAGAGGCTAA TERM 322 410089 - 410120 + T 100 -11.4 -4.69053 | GCCGATTCCGGGCAC CGGCCGCGCCCGCC TGGC GGTGAGCGCAGTCG TTTTGTTAGCTGCTG XOO0403 410574 - 410140 - | hypothetical protein XOO0404 411132 - 410644 - | hypothetical protein TERM 323 411964 - 412002 + G 88 -16.1 -3.41229 | gap 2 CGCTGCCGCAGCGGA CGCCACGCCTGCTGCCGGT GGT GCCG-CAGCAGGTG-GGCG TTGTCCTGGACGTCT XOO0405 411213 - 412136 + | LysR family transcriptional regulator TERM 324 412181 - 412133 - T 70 -12.4 -3.15544 | gap 1, overlap 412137 TGGCACCGGCATCAA CTGACGGCGGCTGGGCG-CATGC GCCT GCATGGCACCCAGCCGCTGCGAT GACCGATCCGGCGTG TERM 325 412177 - 412137 - T 90 -19.8 -2.56715 | gap 1, overlap 412133 ACCGGCATCAACTGA CGGCGGCTGGGCG-CATGC GCCT GCATGGCACCCAGCCGCTG CGATGACCGATCCGG XOO0406 413070 - 412264 - | endonuclease TERM 326 412622 - 412632 + g 71 -4 -4.58283 | ACGACGTTGGCCATG GAAA AGG TTTC TTTTTCCGAGCGTTC TERM 327 413501 - 413484 - g 74 -2.6 -4.82901 | opp_overlap 413459 413484, overlap 413486 413487 GGTGCCGGACAAAAA CACGCG GTCACG CGCCTG TTGATCGACCCCACC TERM 328 414351 - 414339 - g 93 -6.2 -5.40072 | opp_overlap 414345 414348 CGGCGCCGAAAAAAA CGCG AACTG CGCG CCGCGCGTGTGGTGT TERM 329 414531 - 414551 + G 75 -9.7 -3.96148 | overlap 414520 GATGCGCAGGCGCTG CAACGCACG CGG CATGCGTTG TTTGTGATCAGCACG TERM 330 415643 - 415659 + G 93 -13.7 -4.12532 | GCTGCGACACTGGAT CGACCGC GGC GCGGTCG TTTATGTCTGCGGCA piuB 413250 - 415784 + | iron-uptake factor TERM 331 415877 - 415846 - f 89 -11.4 -4.3739 | GAGCGGCTGACAAAA CGACTGCGCTCACC GAAA GGCGGGCGCGGCCG GTGCTCGGAATCGGC TERM 332 416176 - 416207 + G 76 -14.4 -3.07291 | CGCGCACCGTCGCTG GACCCTTGGCGGCA TGGA TGCCGCCAAGGAGC TTACATGGGGTACTT XOO0408 415958 - 416347 + | hypothetical protein XOO0409 417315 - 416407 - | hypothetical protein TERM 333 416839 - 416869 + g 72 -13.3 -3.15544 | gap 1, opp_overlap 416821 CATGCCATCCAGCGA CAGCGTCGGC-GCG CGCT CGTTGCCGGCGCTG TTGATCGCCGTACCC aroE 417341 - 418192 + | shikimate 5-dehydrogenase XOO0410 418182 - 418580 + | hypothetical protein XOO0411 418615 - 418764 + | hypothetical protein TERM 334 418825 - 418803 - f 80 -14.9 -3.21258 | ACGAAGCCAATGGAA GCTGCCTGC GTATT GCAGGCAGC GAGGTCCTCGGTCGG dinG 419042 - 421174 + | ATP-dependent DNA helicase DinG XOO0413 421382 - 421714 + | membrane-fusion protein TERM 335 421898 - 421913 + G 74 -4.6 -4.55697 | GGCGTTGGAGATCTC GCGCTG GCCA CAGGGC TTTGTTTGTCCGCGT XOO0414 421746 - 422579 + | transposase TERM 336 422631 - 422647 + G 74 -10.1 -3.70902 | opp_overlap 422626, overlap 422632 CTGGCAGAGACGATG TGGCGGT TCA ACCGCCG TTTCGATCTGACCCG XOO0415 422628 - 422762 + | transposase TERM 337 423369 - 423387 + G 73 -12.4 -3.41693 | opp_overlap 423371 TATCAGTGCCTACAG CACGGCGG ACC TCGCCGTG TTCATTGATCGTAAC XOO0416 422925 - 423395 + | membrane-fusion protein catB 424086 - 425609 + | catalase precursor TERM 338 425617 - 425648 + F 100 -24.6 -3.05463 | opp_overlap 425624, overlap 425619 AGGACTGATCCGCCC GACGACATCGCGGC CTGC GCCGCGATGTCGTC TTGAGTCCGGGAGAT TERM 339 425619 - 425646 + F 100 -21.4 -3.08679 | opp_overlap 425624, overlap 425617 GACTGATCCGCCCGA CGACATCGCGGC CTGC GCCGCGATGTCG TCTTGAGTCCGGGAG TERM 340 426001 - 425985 - g 70 -11.5 -3.40403 | opp_overlap 425971, overlap 425996 CTGTGCGCAGGACAA GCGCGGC AAC ACCGCGC TGATGGGCGCCATCT ankB 425668 - 426243 + | ankyrin-like protein TERM 341 426436 - 426470 + F 81 -15.8 -3.05384 | opp_overlap 426423 426425, overlap 426434 426431 AACATTGGCAGACCC TGGTGCAACCTCCAGG TCT TCTGCAGGTTGCGCCA TTGCCTGGCAGCGCA XOO0419 426964 - 427188 + | hypothetical protein XOO0420 427455 - 427249 - | hypothetical protein XOO0421 427652 - 428656 + | tRNA-dihydrouridine synthase A XOO0422 428936 - 429295 + | hypothetical protein TERM 342 429291 - 429319 + F 71 -11.2 -3.41878 | gap 1, opp_overlap 429290 429289, overlap 429292 CACGCGACGATAACC G-CTGAACGTAGA CAGT TCTACGTTCAGTC TTATAAATTCCCCGG TERM 343 429292 - 429317 + F 82 -14.9 -3.281 | opp_overlap 429290 429289, overlap 429291 ACGCGACGATAACCG CTGAACGTAGA CAGT TCTACGTTCAG TCTTATAAATTCCCC phoP 429367 - 430050 + | two-component system regulatory protein TERM 344 430145 - 430169 + G 72 -13.5 -3.15544 | overlap 430103 GGCCCGCCAGCTGCT GGCCGCCAGCC TCA GTCTGGTGGCC TTCCTGGCGCTGGCG phoQ 430080 - 431495 + | two-component system sensor protein TERM 345 432457 - 432434 - g 72 -13.2 -3.14132 | gap 1 CTTGGTGCCGATCAA GGCCAACGGCG CGC CGCCGTTG-CC AGCTGCAGCACCAGG XOO0425 431574 - 433205 + | hypothetical protein XOO0426 433256 - 434509 + | hypothetical protein TERM 346 434593 - 434609 + T 71 -5.7 -4.36914 | CGGCAGTGCTTCAAG CGGCGGC TGC GCAGTCG TTTTGTCAGCCGCGC XOO0427 435297 - 434662 - | hypothetical protein TERM 347 435495 - 435530 + H 71 -8.3 -3.87075 | opp_overlap 435494 TGGGACTAACGAATC GCCATCGCTG-CCACCA CCAC TGGTGGACGGCGC-GGC TTTGTGCGGGGTGGT TERM 348 435864 - 435891 + H 73 -12.6 -3.14132 | opp_overlap 435851 435849 435852 GAGGCGCCGGCGGCC AGCCTTGCGGCG CGGA CGCCGCGGGGCA TTGGTCCGACGCGCG TERM 349 436498 - 436510 + G 71 -10.5 -3.64822 | CGCATATCTACTTGT CGGCG TCG CGCCG TTTCAGTGGCGGGCT birA 436095 - 437060 + | biotin--protein ligase TERM 350 437346 - 437359 + G 70 -2.3 -4.60487 | overlap 437347 CCGATCCCAGCCGCT TCGGT GTGG ACCGC TTTTTGGCGCTGCTG baf 437057 - 437785 + | pantothenate kinase XOO0430 437795 - 438724 + | hypothetical protein tdk 440211 - 439528 - | thymidylate kinase XOO0432 440987 - 440691 - | hypothetical protein XOO0433 441233 - 440994 - | hypothetical protein XOO0434 441904 - 441230 - | hypothetical protein TERM 351 441606 - 441593 - G 81 -3.1 -5.0538 | gap 1 GGGCAGGGCAAAAAA CA-GCG CTT CGCATG AAAGACGTTGCGGTA argI 442136 - 443149 + | arginase TERM 352 443437 - 443451 + F 71 -8.5 -3.91897 | TGAATTGTTCGATTT GCGGC AACGC GCCGC TTTATCCATGAGGAG XOO4713 443473 - 443607 + | hypothetical protein TERM 353 443648 - 443633 - f 100 -6 -5.65927 | opp_overlap 443633, overlap 443626 CATGCAAACAAAAAA CGGGCC GCAA GGTCCG TTTTTTTTTGTGCGC TERM 354 443633 - 443648 + F 100 -8.2 -6.22802 | opp_overlap 443633 443626 CATGCAAACAAAAAA CGGGCC GCAA GGTCCG TTTTTTTTTGTGCGC XOO0436 443776 - 444060 + | hypothetical protein TERM 355 444098 - 444134 + F 81 -11.7 -3.95073 | gap 2, opp_overlap 444097 444107, overlap 444107 ACGGGGCGAGCAGAT TGCAGACGACGGGCCGC CCAGT GCGGCCCGT--TCTGCG TTTGTGCGTCTAAAA TERM 356 444107 - 444127 + F 85 -15.4 -3.50047 | opp_overlap 444097 444107, overlap 444098 GCAGATTGCAGACGA CGGGCCGC CCAGT GCGGCCCG TTCTGCGTTTGTGCG TERM 357 444127 - 444107 - f 77 -15.4 -2.64243 | opp_overlap 444107 444098, overlap 444097 GCAGATTGCAGACGA CGGGCCGC CCAGT GCGGCCCG TTCTGCGTTTGTGCG trpS 444229 - 445518 + | tryptophanyl-tRNA synthetase XOO0438 445571 - 446593 + | beta-lactamase related protein XOO0439 447032 - 448708 + | peptidase TERM 358 448805 - 448836 + T 95 -11.4 -4.63932 | GCGGATTCCGAGCAC CGGCCGCGCCCGCC TGGC GGTGAGCGCAGTCG TTTTGTTAGCCGCTC XOO0440 449661 - 449209 - | hypothetical protein XOO0442 449981 - 450628 + | integral membrane protein TERM 359 450753 - 450784 + G 70 -13.8 -2.65264 | gap 1 GCTGCAGATCATTGC CCACC-GCATCGTGT GGA GCACGGTGCTGGTGG TGGTGTGGCTGCTGG XOO0443 450625 - 451533 + | hypothetical protein XOO0444 452749 - 451613 - | hypothetical protein TERM 360 452162 - 452144 - G 76 -13.8 -3.05384 | overlap 452146 TTTGTCGGCAGTGAA CAGCGCGG TGG CCGCGCCG TAGGAAATACCGAAC TERM 361 452160 - 452146 - G 72 -12.8 -3.08679 | overlap 452144 TGTCGGCAGTGAACA GCGCGG TGG CCGCGC CGTAGGAAATACCGA TERM 362 452780 - 452751 - R 93 -13.5 -4.2123 | overlap 452752 GATCGATGGAACAAA CGGCCGAGCAGAC TACG GCCTGCCCGGCCC GCGCATCTACCGCAT TERM 363 452779 - 452752 - R 89 -17 -3.12256 | overlap 452751 ATCGATGGAACAAAC GGCCGAGCAGAC TACG GCCTGCCCGGCC CGCGCATCTACCGCA XOO0445 453221 - 452907 - | hypothetical protein yodB 453962 - 453429 - | cytochrome B561 TERM 364 453475 - 453459 - G 71 -7.9 -4.09685 | overlap 453461 CGCCATGCTGGAAAA CACGCCG TCG CGGCGCA CCCAGGCATGGAACA TERM 365 453473 - 453461 - G 71 -10.5 -3.64716 | overlap 453459 CCATGCTGGAAAACA CGCCG TCG CGGCG CACCCAGGCATGGAA srpA 455050 - 453959 - | catalase TERM 366 454289 - 454333 + g 81 -12.8 -3.62597 | opp_overlap 454315, overlap 454331 CCCCTGCGTCAGCCG CGCATCCAGATCGGTGGCGA GAAAA TCGCCATCGGCCTGCTTGCG TTGTTCGGCGCTCAA prtI 455215 - 455730 + | ECF sigma factor prtR 455727 - 456479 + | transmembrane regulator protein prtR XOO0450 457905 - 456535 - | leucine aminopeptidase TERM 367 457320 - 457291 - G 80 -14.2 -3.4052 | opp_overlap 457313 457313 CTGCAACTCAATCAA GCGCGGCGCGCG ATGCGA CGCGCGCCCCAC CGTATGGATGGTGGG XOO0451 458683 - 457946 - | hydrolase yhhT 459984 - 458815 - | transport protein TERM 368 460009 - 459987 - H 75 -13.4 -3.04322 | CCCAATGCGTCAACA GCGCGCACAG AAT CTGTGGGCGC GGTGTCAGTGAGCGG TERM 369 460178 - 460214 + H 73 -13 -3.16328 | gap 1, opp_overlap 460184, overlap 460174 460172 460170 GCTGGTGTGTTGATT GCA-GAACTCGGCGGGT GCTT ACCCGCCGCGTCCATGC TGTCTCTATTTGCTG TERM 370 460207 - 460184 - H 77 -13.8 -3.32844 | opp_overlap 460178 460174 460172 460170 GTGTTGATTGCAGAA CTCGGCGGGT GCTT ACCCGCCGCG TCCATGCTGTCTCTA TERM 371 460411 - 460444 + H 74 -10.3 -3.74077 | gap 1 CGCCCATCTATGCCC GATCAGCCTGGATGCC AAT GGC-TCCGGGTTGACC TTTCGCTGTGTACGG TERM 372 460488 - 460471 - H 100 -9.1 -5.56673 | opp_overlap 460471 ACGGACAACAAAAAA CCCCCGA TCTC TCGAGGG TTCTTTTAAATCCCA ubiA 461057 - 461956 + | 4-hydroxybenzoate octaprenyltransferase comF 462967 - 462236 - | competence protein F TERM 373 463922 - 463884 - gH 70 -2.2 -4.59773 | overlap 463886 TTCTACGGCGAAAAA CTGCTCACCACCGGCAAC CCG GATACCGAGCGCGACCAG ACGCTGTTCCAGCGC bioB 463011 - 464045 + | biotin synthase TERM 374 464737 - 464748 + GF 76 -5.8 -4.52589 | overlap 464724 CTGGTGGCCCGCATG CAGG ACGC CCTG TTTTATGTGGACGAC TERM 375 465161 - 465136 - gf 74 -11.1 -3.61398 | opp_overlap 465157 465158 CTGTGCGGTGAAGAA GCGACCGTCAT GGCG ATGTCGGCCGC ACTGGAACAGGCGGG bioF 464002 - 465342 + | 8-amino-7-oxononanoate synthase XOO0457 465695 - 466741 + | putative transposase TERM 376 467493 - 467469 - g 74 -12.8 -3.25823 | overlap 467472 TCGCGGCCAGACCAA CTACGCCGCC GCCAA GGCGGCGTTG CACGGTGCCAGCAAG fabG 466981 - 467742 + | 3-ketoacyl-(acyl-carrier-protein) reductase TERM 377 467839 - 467813 - T 83 -14.4 -3.49777 | overlap 467814 TGCGACAGACCAGAA CGCGCTGCAGCC TTG GACTGCAGCGCT AGGCAATTAACCGCC TERM 378 467838 - 467814 - T 86 -17.9 -2.69545 | overlap 467813 GCGACAGACCAGAAC GCGCTGCAGCC TTG GACTGCAGCGC TAGGCAATTAACCGC XOO0460 469893 - 468271 - | halogenase XOO0461 470711 - 469890 - | dolichyl-phosphate mannose synthase related protein XOO0462 471481 - 470708 - | hypothetical protein fabF 472707 - 471481 - | 3-oxoacyl-(acyl carrier protein) synthase I TERM 379 471933 - 471972 + g 71 -12.6 -3.28712 | TGGATTCGCCGTAGC CGCACAGCCACAGCGCCG CATC CGGTGCGGCGGCCGGGCG TTCTAGCAGCGCAAA TERM 380 472993 - 473009 + G 74 -5 -4.46615 | overlap 472994 TTCCTGCCGAAGTGC AGGCGC AGCTG GCGCCG TTTTCGTTCGTGCTG XOO0464 472728 - 473159 + | hypothetical protein TERM 381 473776 - 473798 + F 83 -9 -4.30719 | overlap 473777 ATGCGCAGCGCTGCG CCGCCGGCAC GCC GTGCCGCCGA TTTCTTCTCCGAAGC TERM 382 473777 - 473797 + F 73 -12.5 -3.1811 | overlap 473776 TGCGCAGCGCTGCGC CGCCGGCAC GCC GTGCCGCCG ATTTCTTCTCCGAAG TERM 383 476095 - 476136 + F 72 -12.2 -3.28637 | gap 1, opp_overlap 476112 ACCTTGCTGCTGGCC GGCGCCGACCCGGAACACC TGGCC GGTGG-CCGGGTCAGCCCC TTGCTGCTGTTGCTG TERM 384 477981 - 477968 - g 80 -5.2 -4.75174 | opp_overlap 477969 477980, overlap 477969 477970 TACGCAAGCGAAAAA GGCG TCGGCC CGCC GTCGGACGACGATGG TERM 385 478304 - 478314 + G 75 -6.8 -4.36914 | overlap 478303 TCGCTGCTGCTGATC CCCA TCG TGGG TTTTCTGCCGCCGGA TERM 386 478427 - 478461 + G 88 -14.2 -3.93695 | opp_overlap 478416 GACAGCGCCGACGGC CTGCCGGCCGGCGAGG GCA CCTTCCTGGCCTGCAG TTTCTGGCTGGTGGA XOO0466 476843 - 478690 + | hypothetical protein zwf 478687 - 480483 + | glucose-6-phosphate 1-dehydrogenase TERM 387 480490 - 480519 + F 95 -15.7 -4.0371 | overlap 480491 AGAAGTTGAGTGGCA CGCGTCAGCCGCC GCTA GGCGGTTGACGCA TTTATGTGCGCGGTG TERM 388 480491 - 480518 + F 91 -19.2 -3.01905 | overlap 480490 GAAGTTGAGTGGCAC GCGTCAGCCGCC GCTA GGCGGTTGACGC ATTTATGTGCGCGGT XOO0468 481071 - 482282 + | putative ISXo8 transposase kefC 484199 - 482382 - | glutathione-regulated potassium-efflux system protein TERM 389 483247 - 483218 - G 70 -13.6 -2.64616 | opp_overlap 483214 483235 CGCCCAGCCAGAGCA CGCTGCCCAGCA TCAGGC TGCTGCGCAGCG GCAGTTTGGCCACGC TERM 390 485530 - 485507 - g 74 -10.3 -3.75024 | gap 1 CTGGATCAGGAAGAA GTGGCG-CGG CTGAT CCGTCGCCAC GACCTGCTCGCCATC TERM 391 486183 - 486197 + G 75 -6.4 -4.42806 | overlap 486172 CGACGTTGGTGGACG TCACCG GCT TGGTGA TTTATTTCAGCATCG mgtE 484877 - 486244 + | Mg++ transporter XOO0471 486316 - 486930 + | hypothetical protein TERM 392 486976 - 486927 - f 75 -12.1 -3.59262 | gap 1, overlap 486934 CTCGACATTGTCAAA GTAGGAAGGCCGCGCCATGCCG GCCGCTG CAGCATGGCGCGGCCGGCAT-C GCCACGTGCAACCCG TERM 393 486970 - 486934 - f 100 -23.1 -3.32769 | overlap 486927 TTGTCAAAGTAGGAA GGCCGCGCCATGCCG GCCGCTG CAGCATGGCGCGGCC GGCATCGCCACGTGC TERM 394 487078 - 487045 - f 86 -5.1 -5.14965 | overlap 487047 ATCTTCAGCAAAAAA GCGCCGATCGACGAC GACC GCCATCGTGCAACGC GGCTGTGCCGAACAC TERM 395 487231 - 487241 + G 84 -6.8 -4.72272 | GATGAGTACGTACCA CCTG CAG CAGG TTTTTCGTCCCGGCA TERM 396 487638 - 487688 + G 84 -13.6 -3.57144 | gap 3 CCCCGCATGCGCGGC TCAATGCCAGCATCGCCGCGCATTG CCCG CAG-GC-CGGCGAT-CTGGCGTTGA TTTCCGAATCCAGCG TERM 397 489361 - 489376 + G 80 -11.8 -3.76413 | opp_overlap 489359 CAAGCTGCACAAGGG GCGCGG CCAT CCGCGC TTTGCCATTTTCCCA XOO0472 487217 - 489925 + | hypothetical protein XOO0473 490032 - 491075 + | integral membrane protein TERM 398 491163 - 491139 - f 72 -7.9 -4.13767 | gap 1 GCCGGCAGGTGAAAA CGCCGAAGCG ACAGCA CGCTT-GGCG TCGACGGCGGGTGAA TERM 399 493910 - 493882 - g 75 -2.9 -4.73613 | overlap 493886 CTATTACGAAGAAAA GAAGGACTTCCGG CGT CCGGTCGCCGCTC CTGGTTTGTCGCTGG nrdA 491672 - 494170 + | ribonucleotide-diphosphate reductase subunit alpha TERM 400 494255 - 494273 + F 93 -16 -3.72576 | TCGCGCCTTCGGCGC GCCCCCTG ACT CAGGGGGC TTTCCTCCAGAACGA nrdF 494347 - 495390 + | ribonucleotide-diphosphate reductase subunit beta XOO0476 496273 - 496788 + | flavodoxin trxA 496760 - 497086 + | thioredoxin XOO4716 497300 - 497563 + | IS1404 transposase XOO0478 497416 - 498402 + | IS1404 transposase pcaF 498914 - 500122 + | beta-ketoadipyl CoA thiolase pcaH 500201 - 500929 + | protocatechuate 3,4-dioxygenase beta chain TERM 401 501039 - 501013 - g 72 -12.9 -3.07895 | TGTATCGCCAACAGA TCGCGCCCGCG CAGGC CGCGGGCACGC ATGTGCAGATCAGCG TERM 402 501199 - 501217 + G 78 -3 -4.8622 | overlap 501190 GTTGTGGCCGGGTGC CGACCG ATGGGCA CGGGCG TTTTTCCTTCAGCAC pcaG 500934 - 501497 + | protocatechuate 3,4-dioxygenase alpha chain TERM 403 501755 - 501722 - f 93 -13.7 -4.16284 | opp_overlap 501722 AGAGCGGCTAACAAA CCGACTGCGCTCACC GCCA GGCGGGCGCGGCCGG TGCTTGGAATCGGCA TERM 404 501722 - 501755 + F 72 -13.7 -2.73364 | opp_overlap 501722 AGAGCGGCTAACAAA CCGACTGCGCTCACC GCCA GGCGGGCGCGGCCGG TGCTTGGAATCGGCA pcaB 501944 - 503350 + | 3-carboxy-cis,cis-muconate cycloisomerase catD 503361 - 504143 + | b-ketoadipate enol-lactone hydrolase TERM 405 504575 - 504541 - g 70 -7.6 -3.94877 | ATTCTGGAAGAACAA GCTGCCGAGGCCGGCG CAG CGCCAGCGGCGTCACC CGGATAAGGTCGTCT pcaC 504154 - 504582 + | 4-carboxymuconolactone decarboxylase TERM 406 504639 - 504608 - f 76 -5.6 -4.63932 | overlap 504609 504611 504612 GAGCGGCTAACAAAA TGAGCGCGCTCGCC GCGA GGCCGGCGCGGTCG GTGCGCGATGCAGTA XOO0487 504853 - 505692 + | hydrolase pcaR 506711 - 506040 - | transcriptional regulator TERM 407 507904 - 507861 - g 75 -7.5 -4.25104 | gap 3, overlap 507900 TGCGCGCCAGGAAAA CCTCATCCGCCAGCAAGGCCGC AAA GCGGC-T-GC-GGAAGACGAGG ACTAAAAGCGCCCGC XOO0489 507049 - 507909 + | hypothetical protein TERM 408 507966 - 507912 - f 89 -11.3 -4.32436 | overlap 507900 AGACGAGGACTAAAA GCGCCCGCA-AGCCGCCTGCGCCAACC GTC GGGTG-CGCAGGCGGCAGCGCATTCGC CGCGATGCAGTGCAG XOO0490 508139 - 508618 + | hypothetical protein TERM 409 508753 - 508769 + T 100 -15.1 -4.30014 | opp_overlap 508753 CGGGAGTGAAAAAAA GCCGCGC AGT GCGCGGC TTTTCGATTCATCCG TERM 410 508769 - 508753 - T 100 -15.1 -5.47218 | opp_overlap 508753 CGGGAGTGAAAAAAA GCCGCGC AGT GCGCGGC TTTTCGATTCATCCG TERM 411 508806 - 508824 + T 70 -10.2 -3.61398 | CCTCGGTATGGCTTA CGCGGTGC ACC GCACCACG TTGTTGGCACGCCGC XOO0491 509746 - 508877 - | oxidoreductase TERM 412 509351 - 509381 + g 77 -12.4 -3.61398 | overlap 509339 CAGGTCGGCTTGCTG CGCTGGCGCGGTGC CCA GCGCCAGGCCGGCG TTATTGACCAGCACG XOO0492 510191 - 509727 - | hypothetical protein XOO0493 511079 - 510198 - | hypothetical protein argS 513031 - 511259 - | arginyl-tRNA synthetase TERM 413 512323 - 512357 + g 72 -8.4 -4.07687 | overlap 512304 512324 CGGTCAGGTAGGCGT TGGCCACATCGGCGAT GTA GTCGCCGCGGTAGCCG TTTTCCGGCCAGCCT TERM 414 512881 - 512859 - G 74 -5.4 -4.46212 | overlap 512860 CGCTCGACCACAAAA TCCGGCGGCA GGG TGTCGCCAGG CAGGGTGCCGTTGGC radC 513766 - 513035 - | DNA repair protein RadC dfp 513809 - 515083 + | bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase dut 515080 - 515547 + | deoxyuridine 5'-triphosphate nucleotidohydrolase TERM 415 517657 - 517671 + G 70 -4.9 -4.37886 | overlap 517658 GGAGGGCGATGCGCA TGCGC TGGTC GCGCG TTTTGTCGAGCGTGC algC 516515 - 517909 + | phosphomannomutase XOO0499 518592 - 518017 - | hypothetical protein XOO0500 519324 - 518983 - | hypothetical protein dpm1 520130 - 519324 - | dolichol-phosphate mannosyltransferase wbnF 521435 - 520401 - | nucleotide sugar epimerase TERM 416 521414 - 521398 - G 76 -2.1 -4.88405 | overlap 521386 521400 AATGCGCAAACAAAA GGCCGGC GCC ACCGATC TGAACACACGAAGCG mcrB 521880 - 521572 - | mitomycin resistance protein parB 522845 - 521916 - | chromosome partitioning protein parA 523642 - 522845 - | chromosome partitioning protein TERM 417 523739 - 523709 - R 100 -24 -3.57144 | CGTCGGATCGGGAAA TGCCGCCCGCGGCG TAA CGCCGCGGGCGGGA ATGACGCAGGCGTCG XOO0506 524433 - 523756 - | hypothetical protein pyrE 525118 - 524459 - | orotate phosphoribosyltransferase exoA 525189 - 526046 + | exodeoxyribonuclease III ampG 526366 - 527661 + | signal transducer XOO0511 527720 - 527947 + | hypothetical protein TERM 418 527968 - 527941 - T 76 -12.8 -3.48276 | gap 1 GCCGGCGGGACATAA TC-CCTAGCGCTG CAG CAGCGCCAGGCGA GAAGAGATCGACCGG anmK 529118 - 527985 - | anhydro-N-acetylmuramic acid kinase XOO0513 530907 - 529489 - | hypothetical protein TERM 419 532592 - 532574 - R 85 -10.2 -4.37711 | TGACGAAATGTAAAA GCCGGCTA TGA TGGCCGGC TAGCTACACGGAAAG TERM 420 532786 - 532771 - R 78 -3.2 -5.08601 | overlap 532773 TGACGGCAAGAAAAA GCCC GCTATAAT GGGC GGCTCGCTTCGACGG TERM 421 532882 - 532917 + r 74 -10.4 -3.72576 | GGTAATTTGTGCGGA CGCCTGCAGGAAGGAT GATT GTCCATCTTGCAGACG TTTAATCAAAAAGCA TERM 422 533439 - 533452 + r 72 -4.5 -4.63218 | GTGAAGAAGGCCTTC GGGTT GTAA AGCCC TTTTGTTGGGAAAGA TERM 423 535358 - 535343 - R 82 -6.2 -4.83169 | ATGGCTTTAGAAAAA CAATCT GGAA AGATTG GCCATAGAAGGTGAT TERM 424 538068 - 538047 - R 70 -8 -4.07568 | opp_overlap 538047 CTTCCCTTCGCAAAA GCCTGCAC CTGTGT GTGCAGAC TTTTGAAGAGAAGCA TERM 425 538234 - 538265 + r 100 -20.4 -4.04927 | opp_overlap 538238, overlap 538238 CCAGGGGCTTTACCC GAAACCCTCTATCC AAAT GGATAGAGGGTTTC TTCTTTACTGATTAG TERM 426 538238 - 538261 + r 100 -15.4 -4.60258 | opp_overlap 538238, overlap 538234 GGGCTTTACCCGAAA CCCTCTATCC AAAT GGATAGAGGG TTTCTTCTTTACTGA TERM 427 538261 - 538238 - R 86 -15.4 -3.59979 | opp_overlap 538238 538234 GGGCTTTACCCGAAA CCCTCTATCC AAAT GGATAGAGGG TTTCTTCTTTACTGA XOO0516 538797 - 538321 - | IS1404 transposase XOO4717 539423 - 539160 - | IS1404 transposase XOO0519 542227 - 539918 - | two-component system sensor protein XOO0520 544054 - 542228 - | two-component system regulatory protein TERM 428 542407 - 542423 + g 74 -11.5 -3.65351 | CCACGTCGCGCAATT CGTCGCG CAC CGCGGCG TTTCCGTGGGCATCG XOO0521 544890 - 544237 - | hypothetical protein XOO0522 545004 - 545741 + | hypothetical protein XOO0523 545745 - 545972 + | hypothetical protein XOO0524 545985 - 546194 + | hypothetical protein XOO0525 546237 - 546653 + | iron-sulfur cluster insertion protein ErpA TERM 429 548118 - 548138 + G 85 -12.5 -4.12942 | overlap 548121 548133 GTGCGACCATCGATG CGATGCGCG CGG CGCGCAGCG TTTTGCAGCATTTGA XOO0526 547535 - 548860 + | hypothetical protein TERM 430 548895 - 548929 + F 83 -16.5 -2.94872 | overlap 548892 CCCCGCCGAAGGGTT TGCAGGTGTGGGCGT ATCCC AAGCCCGCACCTGCA TGGTTCTTCACTGCA nudC 549167 - 550057 + | NADH pyrophosphatase ampE 550131 - 551021 + | hypothetical protein TERM 431 551731 - 551684 - T 100 -11.8 -5.07107 | overlap 551685 551688 CAAACTTCCAAAAAA TCCACACGCCCGCACCAGCTGC CAAG GCAGCCGGTGCGAGCGAAAGCT GTAGCAGGCGTTTGG TERM 432 551730 - 551685 - T 86 -15.3 -3.6318 | overlap 551684 551688 AAACTTCCAAAAAAT CCACACGCCCGCACCAGCTGC CAAG GCAGCCGGTGCGAGCGAAAGC TGTAGCAGGCGTTTG TERM 433 551727 - 551688 - T 93 -20 -2.92111 | overlap 551685 551684 CTTCCAAAAAATCCA CACGCCCGCACCAGCTGC CAAG GCAGCCGGTGCGAGCGAA AGCTGTAGCAGGCGT XOO0529 552133 - 551753 - | hypothetical protein aas 554516 - 552594 - | 2-acylglycerophosphoethanolamine acyltransferase TERM 434 553560 - 553548 - G 74 -10.5 -3.71848 | CTGGCCGATCAACAA GCCGG TGA CCGGC GCCGCGTCAGGTCGG XOO0535 559121 - 556908 - | hypothetical protein TERM 435 558590 - 558576 - G 79 -5.6 -4.66833 | overlap 558579 GCCCAACTCGAAAAA CAGCCG CGA CAGCCG CTCGCGGACCGGACG TERM 436 559152 - 559191 + r 84 -2.6 -5.28176 | gap 1, overlap 559153 559155 GGGTGCCCGGGCATT ATTGCCGCAGCCACGCGCC GCT GGCGTG-GGTGGGGGCTAG TTTTTTGTCGGTAGG XOO0536 561118 - 559925 - | hypothetical protein purD 562560 - 561271 - | phosphoribosylamine--glycine ligase TERM 437 563173 - 563146 - R 79 -8.6 -4.37092 | gap 1, opp_overlap 563146 AGCGCGTGTAGAAAA TTCTCCATGGAAG GCT CTTCCACG-AGAA TTTCTAAATGATTTG XOO0538 564430 - 563195 - | ATPase purH 566063 - 564480 - | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase XOO4718 566366 - 566169 - | hypothetical protein TERM 438 566282 - 566305 + g 72 -13.1 -3.11951 | overlap 566281 566279 566274 CGACCGTGGTATTGC GCGGCGGCC CCAGCT GGCCGCTGC TGTATCTGTTGCTGC XOO0542 566881 - 567282 + | hypothetical protein TERM 439 567321 - 567333 + F 73 -3.3 -4.75372 | overlap 567314 GGCGCTACTGCATGC GCTGC GCG GCAAC TTTTTCGTCAATAGT TERM 440 567687 - 567742 + G 72 -11 -3.53012 | gap 1, overlap 567688 TTTGTGCAAGCGCGT TTTGCGCAGCCGCCGGTGCGTGCCGCG TTA CGCGATGCGCACC-GTGCCGGCCCAAG TTTCGAAGAGGCCGA XOO0543 567363 - 568601 + | hypothetical protein TERM 441 568621 - 568657 + G 86 -2.8 -5.1356 | gap 1, overlap 568622 AGCTGCGCGCCCGTT CGGCCGT-GCCGCGCTG TGGC TGGCGTTGCTGGGGCCG TTTTTCTTCCTCAGC XOO0544 568598 - 568996 + | hypothetical protein XOO0545 569127 - 568993 - | transposase TERM 442 569124 - 569108 - G 74 -10.1 -3.70902 | opp_overlap 569103, overlap 569109 CGGGTCAGATCGAAA CGGCGGT TGA ACCGCCA CATCGTCTCTGCCAG XOO0546 570009 - 569176 - | transposase TERM 443 569857 - 569842 - G 74 -4.6 -4.55697 | ACGCGGACAAACAAA GCCCTG TGGC CAGCGC GAGATCTCCAACGCC XOO0547 570316 - 570041 - | putative ISXo8 transposase fis 570915 - 570643 - | DNA-binding protein Fis TERM 444 571093 - 571047 - R 77 -15.1 -2.58812 | gap 1, opp_overlap 571091, overlap 571043 571079 TCGAAACTGAAGGCA GCCGTGCTTGCGGCAGGTTCGC GCAC GCGAAAC-GCCACCTGCACGGC CTGGCCCGGCGCCAG XOO0549 572254 - 571022 - | hypothetical protein XOO0550 572955 - 572578 - | PbsX family transcriptional regulator XOO0551 573045 - 573614 + | hypothetical protein prmA 574702 - 573761 - | ribosomal protein L11 methyltransferase TERM 445 576189 - 576136 - g 80 -14.6 -3.14132 | gap 3 GTGGTCGCGCAGCAA CGCCAGGCCGCGGCGCGCGCCGGCAGC CTG GCTGCCGAGGC-CGCCATG-C-TGGCG CTGGGCGAACCGTTG XOO0554 576070 - 576573 + | hypothetical protein XOO0555 576570 - 576935 + | hypothetical protein TERM 446 577022 - 577047 + T 70 -11.9 -3.18582 | opp_overlap 577027, overlap 577027 TGCCGCAACACAACG AAAAAGCCCGG TTTC CCGGGCTTTTC TTCGTCAGTGCAATG TERM 447 577042 - 577027 - T 100 -11.8 -4.99056 | opp_overlap 577022 577027 CAACACAACGAAAAA GCCCGG TTTC CCGGGC TTTTCTTCGTCAGTG TERM 448 577027 - 577042 + T 100 -11.8 -4.72497 | opp_overlap 577027, overlap 577022 CAACACAACGAAAAA GCCCGG TTTC CCGGGC TTTTCTTCGTCAGTG accC 578441 - 577074 - | acetyl-CoA carboxylase biotin carboxylase subunit TERM 449 577810 - 577824 + g 79 -10 -4.08692 | opp_overlap 577802 GCAAGCACCTGGATT TCCACG TGG CGTGGA TTTTCCAGGAACTTC XOO0557 578896 - 578477 - | hypothetical protein bccP 579402 - 578917 - | acetyl-CoA carboxylase biotin carboxyl carrier protein subunit TERM 450 579066 - 579091 + g 71 -12.5 -3.28712 | CGCCGACCTTGACCT GCTGGCCTACG GTGA CGAAGGCCGGC TTGTCGGGCGAGGGC TERM 451 579285 - 579317 + g 70 -6.2 -4.21319 | gap 1, overlap 579286 GAGCGCTCATCATCG CCGTGCCCTTGG-GC ACGC GCGCCAGGCGCACGC TTTCTTCGCCTTCCT TERM 452 580028 - 580047 + r 73 -6.6 -4.27686 | overlap 580042 ACGAACTTAGATCTA TTTAAAAC AATC GTTTTAAA TTTTAAATGGTTTTG TERM 453 580408 - 580394 - R 88 -7 -5.14563 | overlap 580395 CGTGGCATCAAAAAA GCGGCC CCG GGCCGA CAAAGCCAGCGCGCC TERM 454 580407 - 580395 - R 74 -10.5 -3.68256 | overlap 580394 GTGGCATCAAAAAAG CGGCC CCG GGCCG ACAAAGCCAGCGCGC dsbD 583148 - 580785 - | C-type cytochrome biogenesis protein (copper tolerance) TERM 455 582597 - 582560 - GR 71 -13.3 -3.01712 | gap 1, opp_overlap 582558 582557 CGGGGGTGCCGAACA GGCGCGGGCCGGCGGCGC TGC GCGGCACCAGCGCGC-CC AGATTTTCACGCTGC cutA 583669 - 583115 - | periplasmic divalent cation tolerance protein TERM 456 583532 - 583574 + gr 87 -14.7 -3.62522 | overlap 583503 583568 583568 CGCTGGCTCCGGTGA CGCGGCGTGCTTGAGCGGC CCACA GCCGCTCGCCCGCCCCGCG TTATTGCAGGGGTTG XOO0563 584648 - 583632 - | transposase TERM 457 583763 - 583747 - GR 74 -10.1 -3.70902 | opp_overlap 583742, overlap 583748 CGGGTCAGATCGAAA CGGCGGT TGA ACCGCCA CATCGTCTCTGCCAG TERM 458 584496 - 584481 - GR 74 -4.6 -4.55697 | ACGCGGACAAACAAA GCCCTG TGGC CAGCGC GAGATCTCCAACGCC TERM 459 584829 - 584795 - R 91 -19.3 -3.10796 | overlap 584798 CCGCACGATCCAAGA CCAGTGGCCCGACGC CTCAT GCGCCGGGCCACTGC AGCTGGAACAGCTGA TERM 460 584826 - 584798 - R 90 -19.6 -2.76468 | overlap 584795 CACGATCCAAGACCA GTGGCCCGACGC CTCAT GCGCCGGGCCAC TGCAGCTGGAACAGC TERM 461 584950 - 584973 + r 75 -3 -4.94972 | overlap 584946 584942 GCACCCGCCTGGCGA CCGCTCGCTA CGTT TTGTCAGCGG TTTTTAATTCTACTG XOO0564 586446 - 585064 - | putative ISXo8 transposase XOO0566 587428 - 586913 - | hypothetical protein priA 590053 - 587831 - | primosome assembly protein PriA TERM 462 588142 - 588173 + g 71 -13 -3.04144 | gap 1 GGAACAAGGCCAGGT GCGCGAAG-GGTGGG AAT CCGGCCGCTTCGCGC TGTTGCAGCTCGGCG TERM 463 590111 - 590129 + H 83 -11.6 -4.03234 | opp_overlap 590110 590111 CGAACCGGCTCAAAT CGGCGCCG GTG CGGCGGCG TTTCTGTGACGGAAG TERM 464 590216 - 590184 - H 75 -12.2 -3.65351 | opp_overlap 590181 590180 590184 GGAGGGCTATGGAAA CAGGTTTATCCACA CCGCC TGTGGATAAAGCTG TGAATTAGTCTTGTG XOO0568 590519 - 591544 + | hypothetical protein TERM 465 591704 - 591670 - gT 75 -12.1 -3.42996 | gap 1, overlap 591690 CAGTATCGAGCACAA CCCCGAGCGC-CGCGC AGCA ACGCGCGCGCTGGGAG GCGATGACGCCCGCG XOO0569 591483 - 592130 + | hypothetical protein XOO0570 593306 - 592461 - | hypothetical protein TERM 466 593988 - 593943 - g 71 -12.5 -3.28712 | gap 1, opp_overlap 593978 593979, overlap 593944 CGGGTTTGTCGACAA CGTCATCGCCGGCCACCACGGC ACT GCCACGCTGGCCG-CGGTGACC ATCGGCACCTCGCTG TERM 467 593987 - 593944 - g 77 -16 -2.57132 | gap 1, opp_overlap 593978 593979, overlap 593943 GGGTTTGTCGACAAC GTCATCGCCGGCCACCACGGC ACT GCCACGCTGGCCG-CGGTGAC CATCGGCACCTCGCT TERM 468 594885 - 594909 + G 70 -11.3 -3.3062 | CTATACGGACGATGT GGCCGTGGCCG CGC TGGCCTCGGTC TTGCTGCTGTTTGCC norM 593806 - 595191 + | multidrug efflux protein TERM 469 597006 - 596964 - g 76 -9.7 -4.11216 | opp_overlap 596966 GCGCTATGTGGAAAA GCCGGCCACGCCGTTCTCG CAGTT CATGAACGGGTTCGCCGGC AGCCGCATGGGCGCA sppA 595249 - 597177 + | protease IV TERM 470 597209 - 597235 + T 75 -13.7 -3.06696 | overlap 597213 AGCACCTGATGCGTC GCAACGCCGGC CATGT GCCGGCCTTGC TGTGTTGCAGGCGGA XOO0574 597578 - 597363 - | hypothetical protein TERM 471 598359 - 598331 - g 74 -14.5 -2.55392 | overlap 598327 AAGTGATCGAACGCA CCCCGATGCGCCG CAT CGGCGAACCGGAG GAGGTGGCCGCTGCA trn2 597616 - 598461 + | tropinone reductase XOO0576 599309 - 598623 - | hypothetical protein XOO0577 600148 - 599294 - | hypothetical protein XOO0578 600854 - 600291 - | hypothetical protein topA 603357 - 600865 - | DNA topoisomerase III TERM 472 600966 - 600983 + g 72 -3.3 -4.67982 | gap 1, overlap 600951 600950 600965 CAGCGGTCTTGCTGG CCGCCGTC TTG GTCG-CGG TTTTCTTGGCTGCGG TERM 473 603446 - 603478 + r 78 -12 -3.7511 | overlap 603451 GGTTGTTTCCCACGC GTTAACGCCCGGGA AGTGC TCCCGGGCGTTCAG TTATCTTATGAGAAA TERM 474 603451 - 603473 + r 88 -16.3 -3.30218 | overlap 603446 TTTCCCACGCGTTAA CGCCCGGGA AGTGC TCCCGGGCG TTCAGTTATCTTATG TERM 475 603517 - 603494 - R 70 -7.4 -3.9712 | gap 1, opp_overlap 603496 603502, overlap 603496 603497 TTATCTTATGAGAAA GATCACCGCGG ACG CCGCCGTG-TC AAGCGACGAGCGCCG XOO0580 604814 - 603540 - | hypothetical protein TERM 476 604489 - 604445 - G 71 -11.9 -3.23216 | opp_overlap 604447 CGGCAGCATCATTAA CACTGGCGATGCCGCCGCCAG TCA CTGCCGGCGGCCACGGCGATG TCTCCGCAGCGTGGT pilA 605260 - 604856 - | fimbrial protein TERM 477 605386 - 605338 - R 80 -14.4 -3.20348 | gap 1 CGGACCAATAGGTAA GCGGCGGCTGTGCCGCAGCACGC GGCA ACG-GCGGCGGAACCGCAGCCGC ACGCACATCCGTGGC smg 606092 - 605619 - | hypothetical protein smf 607277 - 606135 - | DNA processing chain A TERM 478 607300 - 607327 + r 73 -12.6 -3.18264 | opp_overlap 607302, overlap 607301 GGTTAGGCCGCAAAC AACGACGGCGCC CTCG GGCGCCGTCGCG TTGATGCATCGGAAC TERM 479 607301 - 607326 + r 79 -16.1 -2.50816 | opp_overlap 607302, overlap 607300 GTTAGGCCGCAAACA ACGACGGCGCC CTCG GGCGCCGTCGC GTTGATGCATCGGAA TERM 480 607325 - 607302 - R 100 -19.6 -3.91716 | opp_overlap 607301 607300 TTAGGCCGCAAACAA CGACGGCGCC CTCG GGCGCCGTCG CGTTGATGCATCGGA XOO0584 608512 - 607349 - | hypothetical protein TERM 481 607999 - 608039 + g 71 -7.3 -4.07568 | opp_overlap 607994 608022 GCAGACTGAACTTCA CGGTCGGGCGCACCACCGC AAA GCGCTGGCCCGGCTGAGCG TTTTCCAGCCCGACC TERM 482 608582 - 608596 + H 74 -12.8 -3.34517 | opp_overlap 608555, overlap 608580 AATGACACCGTCTTG CCGGCG CAG CGCCGG TGTTTCCAGACGGGT def 608618 - 609130 + | peptide deformylase fmt 609524 - 610447 + | methionyl-tRNA formyltransferase sun 610339 - 611760 + | hypothetical protein TERM 483 612428 - 612440 + G 73 -6.2 -4.4078 | overlap 612407 TGTGCGCGTGCATGT GCGC GATCG GCGC TTTTGGTTGGGGCCG XOO0588 611811 - 613532 + | hypothetical protein XOO0589 613697 - 614974 + | hypothetical protein XOO0590 615996 - 615172 - | lipopolysaccharide core biosynthesis glycosyl transferase TERM 484 616346 - 616376 + G 72 -8.8 -4.15565 | overlap 616347 CGGCCACCACCGCGC CGTTCCGCGCGCTG GCG CAGCGCGAGGGCCA TTTTGCGGTGGTGGA TERM 485 616556 - 616608 + G 74 -10.6 -3.68836 | gap 2, opp_overlap 616542 TCGCCGCCGACATCG CGCGCGGTGCGCATTACTGGCTGC TGACCTT GCACCC-GAAATGCGCTCCG-GCG TTGTTCGATCGCTAT XOO0591 615997 - 617055 + | hypothetical protein XOO0592 618687 - 617221 - | hypothetical protein TERM 486 617340 - 617371 + g 73 -12.2 -3.31144 | CGGTCAGCCGATCCA GCGGCGAGCGTTGC AGTT GCAACGCCTGCAGC TTGTCCAGCTCGGCC TERM 487 617972 - 617958 - G 70 -2 -4.64676 | overlap 617960 GCATTGCCAACAAAA CAGCCA GCG TGGCAA TCGTCACCAGCGTTG TERM 488 618676 - 618624 - G 72 -12.8 -3.13403 | overlap 618622 618628 TCTGTTGCAGCAACA CGAACACCCACGACAACG-GATGCAG GCG CTGCTCGTCGTTGCCG-GGGTGCTCG ATGGCGCTCATAGCG XOO0593 619280 - 618684 - | hypothetical protein ribA 620430 - 619297 - | GTP cyclohydrolase TERM 489 619976 - 619946 - G 75 -11.8 -3.53224 | CAGCCGCGGCTCAAA TCGCCCAGTGCCAG CGA CTGGCAGCCGGCGA ACGCGGCATGGTCGT yncA 620589 - 621194 + | phosphinothricin acetyltransferase htrB 622410 - 621394 - | lipid A biosynthesis lauroyl acyltransferase TERM 490 622369 - 622324 - Gf 71 -10.1 -3.66178 | opp_overlap 622353, overlap 622342 TCGCGCAATTCTAAA CAGCGCGGCCGGCGAAGACCC GCGC GTGACAGTGCCGGCAGCGCTG GGCATGCTGCGCGGA TERM 491 622810 - 622831 + GH 71 -5.8 -4.30719 | overlap 622802 TATGGTTGTCGACCT GGTCAACG ATGGCC CGGTGACC TTTCTTCTCAGACCC XOO0597 622409 - 622849 + | D-tyrosyl-tRNA deacylase rpoD 622943 - 624832 + | RNA polymerase sigma factor RpoD TERM 492 624888 - 624865 - f 90 -13.8 -3.97947 | opp_overlap 624866, overlap 624866 624868 TGCAGTGATCACAAA GCAGCCCCGC TCAT GCGGGGCTGT TGTGTTGTGGCCCAG TERM 493 624887 - 624866 - f 88 -17.3 -2.98447 | opp_overlap 624866, overlap 624865 624868 GCAGTGATCACAAAG CAGCCCCGC TCAT GCGGGGCTG TTGTGTTGTGGCCCA TERM 494 624866 - 624887 + F 100 -17.3 -3.7511 | opp_overlap 624866 624865 624868 GCAGTGATCACAAAG CAGCCCCGC TCAT GCGGGGCTG TTGTGTTGTGGCCCA TERM 495 624885 - 624868 - f 75 -14.1 -3.0439 | opp_overlap 624866, overlap 624866 624865 AGTGATCACAAAGCA GCCCCGC TCAT GCGGGGC TGTTGTGTTGTGGCC TERM 496 625659 - 625676 + F 100 -9.1 -5.31877 | opp_overlap 625647 625658 AATCTGATACGCAAC GCTCAGC CACC GCTGGGC TTTTTTGTCGTGGGT TERM 497 626669 - 626654 - g 76 -6 -4.51812 | overlap 626655 CGCGAGAAGAAGAAA CCCGCC TGAT GGCGGC GGTCGATGCTCACTC TERM 498 626825 - 626814 - g 81 -3.6 -5.01811 | CCAGGAAACGAAAAA CACG ATGT CGCG TACCGTTCCTCTGAC XOO0599 625987 - 627189 + | phage integrase family site specific recombinase TERM 499 628018 - 627975 - g 100 -20.5 -3.28924 | overlap 627976 CACCCCCTCCGACAA GTTGTCACCGGGGG-GCGACG CGGC CGTCACTCCCCCGGTGACA-C GACAGACATCCCAGG TERM 500 628018 - 627976 - g 100 -20.7 -2.57211 | gap 1, overlap 627975 ACCCCCTCCGACAAG TTGTCACCGGGGG-GCGACG CGGC CGTCACTCCCCCGGTGACAC GACAGACATCCCAGG XOO0600 627664 - 628515 + | hypothetical protein XOO0601 628998 - 629567 + | putative transposase XOO0602 629533 - 630009 + | putative transposase traF 630006 - 630719 + | TraF protein XOO0604 630733 - 631212 + | hypothetical protein XOO4720 631323 - 631469 + | plasmid-related lipoprotein TERM 501 631542 - 631572 + G 80 -4.8 -4.72272 | overlap 631545 GTTCATCACCGGAAC CGTGGGTG-AGGTC ATTTC GACCTTCACCC-TG TTTTTCATCGGCGGG TERM 502 631545 - 631570 + G 75 -9.8 -3.98256 | gap 1, overlap 631542 CATCACCGGAACCGT GGGTG-AGGTC ATTTC GACCTTCACCC TGTTTTTCATCGGCG traH 631471 - 632556 + | TraH protein XOO4721 632862 - 633020 + | hypothetical protein TERM 503 633041 - 633058 + F 90 -8.3 -4.91852 | TCGATCCGCACCATG GCCCCGC CTCG GCGTGGC TTTCTTTTTGGTGAC TERM 504 633208 - 633180 - f 86 -16.3 -3.15544 | opp_overlap 633186 CTGCATTGGTAGTAA TAGTCGTAGTAAT ACT ATTACTACGACTA CAAGGCTCTGGCAGT TERM 505 633338 - 633352 + F 83 -12.8 -3.85698 | GACTCCGAAGGCTGC GGCGGC GAA GCCGCC TTTCTCCACCACGCC XOO0606 634333 - 634743 + | XorII very-short-patch-repair endonuclease TERM 506 634747 - 634764 + F 78 -7 -4.64048 | opp_overlap 634747 GACCCGAGCTAAAAA CGATCG ACAAAG CGATCG TTTCTTTGTATGATC TERM 507 634764 - 634747 - f 78 -7 -4.66609 | opp_overlap 634747 GACCCGAGCTAAAAA CGATCG ACAAAG CGATCG TTTCTTTGTATGATC XOO0607 634770 - 636098 + | modification methylase XorII afa22MI-R 636095 - 636892 + | endonuclease TERM 508 636939 - 636971 + T 93 -3.5 -5.60689 | gap 1, opp_overlap 636955, overlap 636924 636944 GTTTTGCCCACCTTC GTCAAGCTGCGCTA AACTAC TGTCGCAGCTT-AC TTTTTTGTTCTGTAG TERM 509 637090 - 637119 + T 100 -15.1 -4.42788 | opp_overlap 637090 GCCCACCAATAAAAA CAGGCACTTGGAC GCGA GTCGAAGTGCCTG TTTTGTGGGCTTGGG TERM 510 637119 - 637090 - T 100 -15.1 -5.1356 | opp_overlap 637090 GCCCACCAATAAAAA CAGGCACTTGGAC GCGA GTCGAAGTGCCTG TTTTGTGGGCTTGGG int 638426 - 637152 - | phage-related integrase XOO0610 638766 - 638560 - | hypothetical protein XOO0611 639035 - 638763 - | hypothetical protein TERM 511 638841 - 638859 + g 80 -14.6 -3.17194 | overlap 638857 TGCCTGGCGAGGCAC GCGGATGC GAT GCATCCGC TTCCATTCGGCCAGT TERM 512 638958 - 638927 - G 71 -10.1 -3.67775 | gap 2, overlap 638913 ATGGGCACTCAATAA CGTGCCCGCCGCCGG CCTG CAGGCGGCGG-C-CG TCCGCGATGTGCCGG XOO0612 639396 - 639274 - | hypothetical protein XOO0613 639549 - 639421 - | hypothetical protein XOO0614 639754 - 639858 + | IS1404 transposase TERM 513 640810 - 640787 - T 90 -2.2 -5.40474 | overlap 640790 640791 640802 ACCGCCCCAAAAAAA CAATCGGCGC AATG ACGCCGGCGG CCTATGCCCAGCAGT TERM 514 640807 - 640790 - T 78 -4.7 -4.79949 | overlap 640787 640791 640802 GCCCCAAAAAAACAA TCGGCGC AATG ACGCCGG CGGCCTATGCCCAGC XOO0618 642448 - 641213 - | transposase XOO0620 644245 - 643229 - | transposase TERM 515 643360 - 643344 - G 74 -10.1 -3.70902 | opp_overlap 643339, overlap 643345 CGGGTCAGATCGAAA CGGCGGT TGA ACCGCCA CATCGTCTCTGCCAG TERM 516 644093 - 644078 - G 74 -4.6 -4.55697 | ACGCGGACAAACAAA GCCCTG TGGC CAGCGC GAGATCTCCAACGCC tnpA 644865 - 644416 - | transposase XOO0622 644900 - 645202 + | IS1404 transposase XOO0624 646103 - 647602 + | hypothetical protein XOO0625 647557 - 648870 + | hypothetical protein TERM 517 649500 - 649484 - g 87 -7.9 -4.78107 | overlap 649486 CATCATCACCAAAAA GCCGCTG TTT CAGCCGC AGAACAGCGTGGATG XOO0626 648960 - 651101 + | ferrichrome-iron receptor 3 XOO0627 651851 - 651186 - | hypothetical protein TERM 518 651647 - 651618 - G 75 -13.6 -3.01712 | gap 1, opp_overlap 651630, overlap 651585 CGCTGGCGTTGAAGA CGTCGCCGCAGGC CTGCC GCC-ACGGCGACG GGTTACCTGCTTCAG XOO0628 652522 - 651848 - | hypothetical protein XOO0629 655239 - 652519 - | hypothetical protein TERM 519 652681 - 652647 - GR 70 -11.6 -3.19522 | gap 2, opp_overlap 652672, overlap 652642 CCACGTAATAGGCAA GCTGG-T-CGTCGCTG CGTGC CAGCGACGCATCCAGC GCAGTGGCGAGGTGC TERM 520 654020 - 654065 + gr 74 -10.4 -3.72576 | GCGCTCTGTTCGATG GCG-GCGCTGACTCCGTGCAAC TGCT GTTGCACGGCG-CTGCTCACGC TTTCCTGCAAGGCAA TERM 521 654346 - 654321 - GR 74 -14.7 -2.64155 | opp_overlap 654317, overlap 654317 CCGGCTGCAAAGCCA CGCCGACAGCG CGTG CGCTTTCGGCG ACACCGGCCTGCAGC XOO0630 655936 - 655187 - | hypothetical protein TERM 522 655956 - 655940 - H 78 -6.5 -4.56597 | TCTTCCGTTCAAAAA CCGTGGA TTT TACACGG GAATGCGTACAGCTC XOO0631 656263 - 656475 + | hypothetical protein XOO0632 657117 - 656896 - | hypothetical protein TERM 523 656952 - 656962 + g 100 -4.6 -5.52384 | overlap 656951 CTGGCGCTGCTTCCG GCGT GAC GCGC TTTTTTTCCTGACGC XOO0633 657378 - 657127 - | hypothetical protein TERM 524 657627 - 657588 - H 82 -15 -3.26947 | gap 1, opp_overlap 657588 GAATGTCCACACCAA CGT-TGCCCACCGCAGGCA GCG CGCCTGCGGTGGCCTCACG TATGTGGAAACATCG TERM 525 657588 - 657627 + H 77 -14.3 -2.87564 | gap 1, opp_overlap 657588 GAATGTCCACACCAA CGT-TGCCCACCGCAGGC AGCGC GCCTGCGGTGGCCTCACG TATGTGGAAACATCG XOO0634 657833 - 657997 + | hypothetical protein TERM 526 658064 - 658029 - T 100 -21.2 -3.79519 | gap 1, opp_overlap 658029 AATCGCAGCACGAAA CGCAGGCGGGCGCGGTC GAT GACCGCGTC-GCCTGCG TTTGCCACCTCCACG TERM 527 658029 - 658064 + T 100 -23.4 -3.55444 | gap 1, opp_overlap 658029 AATCGCAGCACGAAA CGCAGGCGGGCGCGGTC GAT GACCGCGTC-GCCTGCG TTTGCCACCTCCACG ybdR 658862 - 658083 - | Zn-dependent alcohol dehydrogenase TERM 528 658221 - 658235 + g 72 -2.8 -4.60041 | overlap 658220 GCCGATGCATTCCAG CAGATG CGG CATGTG TTTTTGCACGTGCGT XOO0636 659563 - 659168 - | putative transposase XOO0637 659900 - 659529 - | putative transposase cioB 660986 - 659970 - | cyanide insensitive terminal oxidase cioA 662332 - 660977 - | cyanide insensitive terminal oxidase XOO0640 662968 - 662396 - | hypothetical protein TERM 529 662765 - 662786 + g 71 -12.3 -3.21912 | gap 1, opp_overlap 662769, overlap 662769 662772 TCGAGCCGGGGGTAA GGCAG-CGCG CGT CGCGACTGCC TTGATCGCTTCCGCA TERM 530 663915 - 663893 - g 72 -8.5 -4.08216 | gap 1 GCATCGTTGGCAAAA GCGACAGCAT CGTG ATGCTG-CGC AAGGACATCGTGCGC XOO0641 663484 - 664782 + | NtrC family transcriptional regulator XOO0642 664782 - 665048 + | hypothetical protein exsF 665397 - 665017 - | regulatory protein TERM 531 665203 - 665152 - G 86 -9.5 -4.51174 | gap 3, overlap 665147 665191 GGAGCAGAACGAAAA CGG-CACGCCGCG-CTCC-ATCAACG CAT CGGCGACCGGAAACACGGCGTGTCCG CGCACATTGACATCC TERM 532 665767 - 665799 + G 76 -14.1 -3.14132 | overlap 665777 GCAGGCGCTGCGAAT CTGGCGATCATGCTG CTG CTGCGCGATCGCCAG TTGCTGGACGAGGCG TERM 533 666447 - 666498 + G 81 -2.8 -5.00616 | gap 1, overlap 666446 CATCCTGCGCTACCG CTTCGACGAGCCGTTGCAGCTGTTC AAC GACCTGCTG-ATCGGCGTGACCAAG TTTTTTCGCGACCGC cheR 665623 - 667332 + | methyltransferase XOO4723 667637 - 667900 + | IS1404 transposase TERM 534 668216 - 668193 - gT 72 -3.1 -4.59773 | gap 1 CCGCACGCGTAAAAA GGTGC-CGGT AGGCG AGCGTGCACC GTTGCTGCGGCCCAC TERM 535 668686 - 668669 - gT 78 -4 -4.79949 | overlap 668670 668681 GCCCCAAAAAAACAA TCGGCG GAATGA CGCCGG CGGCCTATGCCCAGC XOO0646 667753 - 668739 + | IS1404 transposase XOO0647 670255 - 668873 - | putative ISXo8 transposase XOO0648 670635 - 670910 + | hypothetical protein XOO0649 672433 - 671219 - | D-amino acid oxidase XOO0650 672708 - 673250 + | hypothetical protein XOO0655 674760 - 675854 + | transposase algR 675941 - 676141 + | transcriptional regulator protein TERM 536 676558 - 676507 - g 71 -9.2 -3.73647 | gap 1, overlap 676509 CTGATCTACGAAGAA CAGTGCGCGCCCCGCCGCGCCGG GACACCG CCAGCGCGCCGGCCTGCGC-CCG CAAGACACTGGACAG XOO0657 676264 - 676584 + | hypothetical protein TERM 537 676771 - 676744 - f 71 -5.7 -4.36411 | gap 2, opp_overlap 676769 676770, overlap 676753 GACGAACGAGGAAAA CGTCAGTAAGCCT GAAT AGGC--ACTGACG GCACGCGGCCGCTTC TERM 538 677849 - 677837 - g 81 -9.1 -4.21812 | CGGCATGGAAAAGAA CGGCA CCA TGCCG GCCGCACTGGGCAAG ybeC 676803 - 678437 + | amino acid transporter TERM 539 678559 - 678528 - T 95 -11.4 -4.64334 | opp_overlap 678557 AAGCGGCTAACAAAA CGACAGCGCTCACC GCCA GGCGGGCGCGGCCG GTGCTCGGAATCGGT TERM 540 678693 - 678663 - T 100 -19.8 -3.90922 | opp_overlap 678663 678666, overlap 678666 AGCCGCTCTAAAGAA GAACGGCCGGTGCA TTG TGCATCGGCCGTTC TTGTATTCAGCGCAT TERM 541 678663 - 678693 + T 100 -22 -3.65991 | opp_overlap 678663 678666, overlap 678666 AGCCGCTCTAAAGAA GAACGGCCGGTGCA TTG TGCATCGGCCGTTC TTGTATTCAGCGCAT TERM 542 678690 - 678666 - T 95 -15.7 -4.08557 | opp_overlap 678663 678666, overlap 678663 CGCTCTAAAGAAGAA CGGCCGGTGCA TTG TGCATCGGCCG TTCTTGTATTCAGCG TERM 543 678666 - 678690 + T 100 -17.9 -3.9644 | opp_overlap 678666 678663, overlap 678663 CGCTCTAAAGAAGAA CGGCCGGTGCA TTG TGCATCGGCCG TTCTTGTATTCAGCG TERM 544 678712 - 678764 + T 74 -9.2 -3.87869 | TATTCAGCGCATAAT CGCT-GCAGGTGGATGCGGCTGGATC GAC GCTTCA-CTGCATCCGCATGCCGGCG TTTGTCAGGAATTCA XOO0660 679674 - 678769 - | hypothetical protein XOO4724 680520 - 680852 + | hypothetical protein XOO0662 683295 - 681181 - | metallopeptidase XOO0663 684096 - 683401 - | hypothetical protein TERM 545 683484 - 683473 - G 74 -2.2 -4.82901 | TCCGCGCCACAAAAA TCGC AGCA GCAA GCCGAGGTGTTCGCG XOO0664 685332 - 684337 - | oxidoreductase TERM 546 684433 - 684460 + g 79 -6.3 -4.64676 | gap 1, opp_overlap 684405 684403 GGCCAGTTCGTCCGG CATCAGCGCCAC ATCCA GTGCCGC-GATG TTTTCTTCCAGATAG TERM 547 685456 - 685415 - R 86 -18 -2.78596 | opp_overlap 685415 CACGCGCTGATCACA GCCCGCACAGCTCGGCCG GCAACG CTGCCGAACTGCGCAGGC TGTGATGACGTGCGA wrbA 686041 - 685472 - | tryptophan repressor binding protein XOO0666 686154 - 686435 + | hypothetical protein XOO0667 686533 - 687012 + | hypothetical protein TERM 548 687235 - 687286 + G 75 -6.5 -4.38712 | gap 3, overlap 687260 687261 TGGCGATGGGCGCAG CCGGCGACGA--CCGGC-TCGGCGCG CAG CGCATCGACGCCGGCATCGATGCGGG TTTTCTGGCGATGGA XOO0668 686988 - 687353 + | hypothetical protein TERM 549 688122 - 688101 - g 79 -2.1 -5.00616 | gap 1 TGGCGCCGGAAAAAA GCGTGGGCGG CAT CCGCTCG-GC CATGGGCGAGTTGCG TERM 550 688231 - 688179 - g 77 -11.7 -3.72765 | opp_overlap 688228, overlap 688172 AACGCAAAGCCGAAA CGGTGCGCCGGGCCAAGCCGCCGCG CTT CGCACCGGCCGGGCAGAGCACACAG ATGATCGTCGGCGCC TERM 551 688263 - 688233 - g 81 -15.4 -3.04269 | opp_overlap 688228, overlap 688236 GGCAGAGCACACAGA TGATCGTCGGCGCC GAC GACGCCGACGACCG CAGCATTCTGGACAC TERM 552 688260 - 688236 - g 84 -17.9 -2.74038 | opp_overlap 688228, overlap 688233 AGAGCACACAGATGA TCGTCGGCGCC GAC GACGCCGACGA CCGCAGCATTCTGGA XOO0669 687551 - 688795 + | hypothetical protein XOO0670 688802 - 689908 + | DNA polymerase related protein TERM 553 690304 - 690283 - T 100 -12.3 -5.47218 | overlap 690285 GCGCAGGCAAAAAAA TACGCGTGC AACG GCACGCGCA CGGTGTCGGAGAATC TERM 554 690302 - 690285 - T 95 -12.7 -4.37763 | overlap 690283 GCAGGCAAAAAAATA CGCGTGC AACG GCACGCG CACGGTGTCGGAGAA TERM 555 690860 - 690813 - T 76 -11.2 -3.72576 | overlap 690814 690837 CGCTCCTGCATCAAA CCGCTGCGCCATCGGCGGAA AAACCGCA TTCCGCCGATGGCGTCGTGC ACGCGTCAGCAGCGA TERM 556 690859 - 690814 - T 77 -14.7 -2.83403 | overlap 690813 690837 GCTCCTGCATCAAAC CGCTGCGCCATCGGCGGAA AAACCGCA TTCCGCCGATGGCGTCGTG CACGCGTCAGCAGCG XOO0671 691509 - 690901 - | hypothetical protein TERM 557 691530 - 691546 + r 81 -4.4 -5.08824 | gap 1, overlap 691519 CGCGGCCTGATGCGG CGCG-GA TGCA TCACGCG TTTTTTACATAAACA XOO0672 693061 - 691826 - | transposase XOO0674 694289 - 693252 - | putative transposase XOO4725 694547 - 694927 + | hypothetical protein yjcE 695395 - 697032 + | Na+:H+ antiporter yadG 697279 - 698223 + | ABC transporter ATP-binding protein XOO0677 698226 - 698981 + | ABC-2 type transporter XOO0678 699782 - 699396 - | hypothetical protein XOO0679 699750 - 700364 + | hypothetical protein XOO0680 702400 - 700493 - | protease xadA 705530 - 702447 - | outer membrane protein TERM 558 704124 - 704112 - GH 81 -10.5 -4.13767 | CGTTGCATGCGAAAA GGCGC CCA GCGCC ACCGCGCTGACCGGA TERM 559 704392 - 704422 + gH 71 -12.5 -3.01791 | opp_overlap 704392, overlap 704414 TTGGGGGCGAACGAA CCGGCGCTGTGGC CGATC GCCACGGCATCGG TGTTGCCCGGCAGAT cvgSY 705253 - 706995 + | histidine kinase/response regulator hybrid protein XOO0683 707705 - 706977 - | two-component response regulator TERM 560 707852 - 707880 + r 72 -12.4 -3.37796 | gap 1 GACGGGTGTGACGGT GCGCCGCCTGTCG GCGT CG-CAGGCGCCGC TTATGCGTGCTCGCC XOO4727 708165 - 707881 - | hypothetical protein XOO0685 708740 - 708174 - | hypothetical protein TERM 561 708397 - 708433 + g 75 -15.1 -2.66435 | overlap 708394 GTGTTCAGGTATTCC TCGGCGGTCTGGCCTTC GTC GGCGGCCAGGTCGTCGA TCATCTGCTGCAGCT TERM 562 708916 - 708885 - R 95 -11.4 -4.63932 | GAGCGGCCAACAAAA CGACTGCGCTCACC GCCA GGCGGGCGCGGCCG GTGCTCGGAATCGGC motB 710260 - 709127 - | flagellar motor protein MotB TERM 563 709870 - 709883 + g 79 -2.3 -4.99861 | TCAGTTCCTGCATCA GCGTT TCCA GGCGC TTTTTGTCCTTGCTG motA 711125 - 710271 - | flagellar motor protein MotA XOO0689 711462 - 711223 - | hypothetical protein TERM 564 711546 - 711586 + r 73 -12.6 -3.12351 | overlap 711548 GCGGGCCGGCGACGC TGGCGTCGGTGCCCAC GGCAGGTGG GTGGGCATCGGCGCTG TTGGCTGTGGCGGGC TERM 565 711548 - 711584 + r 83 -15.2 -3.12327 | overlap 711546 GGGCCGGCGACGCTG GCGTCGGTGCCCAC GGCAGGTGG GTGGGCATCGGCGC TGTTGGCTGTGGCGG XOO0690 712484 - 712020 - | methionine sulfoxide reductase B XOO0691 712753 - 713190 + | hypothetical protein lrp 713721 - 713242 - | leucine responsive regulatory protein dadA 713870 - 715159 + | D-amino acid dehydrogenase small subunit alr 715159 - 716259 + | alanine racemase TERM 566 716612 - 716593 - T 100 -15 -4.70659 | GCCGACACGCAAAAA CGGCGCGT TGCC ACGCGCCG TTCGCACACACAGCC XOO0695 717336 - 716662 - | hypothetical protein XOO0696 717431 - 717928 + | hypothetical protein XOO0697 717894 - 718223 + | hypothetical protein XOO0698 718310 - 720346 + | sensor histidine kinase TERM 567 720487 - 720508 + F 100 -10.1 -5.5353 | opp_overlap 720487 720486 720484 TGGCAATGGAAACAG CCGACCGTT TCGC AACGGCCGG TTTTTTATTGATCTG TERM 568 720609 - 720578 - f 86 -7.8 -4.69053 | overlap 720565 720563 GAGCAGCCAACAAAA CGACTGCGCTCACC GCCA AGCGGGCGCGGCCG GTGCCCGGAATCGGC XOO0699 720801 - 721139 + | hypothetical protein TERM 569 721636 - 721608 - g 84 -6.6 -4.77036 | gap 1, overlap 721609 721610 CGCGATGATGAAAAA GGCCGGCGC-GGC GGTG GCCAGCGCCAATC GCATCACGTTGCTGC TERM 570 721656 - 721705 + G 93 -6.4 -5.2189 | gap 2, overlap 721657 CACGTTGCTGCGCGA TGCCGATGGCG-ACGGTGTG-GCA GAGG TGCGCACGCAGTTCGTCAGCGGCC TTTTTTCGTCGTTCG TERM 571 721657 - 721704 + G 71 -9.9 -3.72049 | gap 2, overlap 721656 ACGTTGCTGCGCGAT GCCGATGGCG-ACGGTGTG-GCA GAGG TGCGCACGCAGTTCGTCAGCGGC CTTTTTTCGTCGTTC sndH 721228 - 722565 + | L-sorbosone dehydrogenase TERM 572 722662 - 722693 + T 73 -11.4 -3.66288 | overlap 722683 GCCGATTCCGGGCGC CGGCCGCGCCCGCC TGGC GGTGAGCGCAGTCG TTCTGTTAGCCGCTC TERM 573 722974 - 722962 - T 78 -3.3 -5.02074 | overlap 722973 TCAGCTTGGAAAAAA GAGCG AAA CACCC CTCGGCCGCCGAACG TERM 574 723031 - 723016 - T 100 -6 -5.59879 | opp_overlap 723016 723028, overlap 723017 GATAAACACAAAAAA TCGGGC ACAG GCCCGG TCTCTGGTTGATCAG TERM 575 723030 - 723017 - T 74 -9.5 -3.93487 | opp_overlap 723016 723028, overlap 723016 ATAAACACAAAAAAT CGGGC ACAG GCCCG GTCTCTGGTTGATCA XOO0701 723509 - 723126 - | hypothetical protein TERM 576 723597 - 723640 + G 72 -11.6 -3.44284 | gap 1, overlap 723595 GCTTCAAGCCCTGTT CCTG-CCCTTCGCCCAAGGCG TGC TGCCGTGGCCGGAGGGGCCGG TGTTGTTCCTGCGCG rsmC 723529 - 724626 + | ribosomal RNA small subunit methyltransferase C rsuA 724623 - 725336 + | ribosomal small subunit pseudouridylate synthase XOO0704 725333 - 726013 + | hypothetical protein XOO0706 727235 - 726756 - | oxidoreductase XOO0707 728019 - 727378 - | hypothetical protein XOO0708 728960 - 728097 - | hypothetical protein XOO0711 731169 - 730684 - | nucleotide-binding protein XOO0712 731277 - 732173 + | hypothetical protein TERM 577 732756 - 732730 - gf 72 -13.6 -2.68823 | overlap 732729 732732 TCGGGCGGACAGAAG CAGCGCGTGGGC ATT GCGCGCGCGCTG GCCACCGGGCCGCAG abc 732097 - 733299 + | ABC transporter ATP-binding protein TERM 578 733312 - 733324 + G 79 -10.5 -4.16284 | TGAACCCGATCGTTG CCGCC GCT GGCGG TTTCTTCCGCAATCT yaeE 733296 - 733991 + | ABC transporter permease XOO0715 734086 - 734886 + | outer membrane protein XOO0716 735263 - 735820 + | hypothetical protein TERM 579 736072 - 736043 - T 95 -19.5 -3.29263 | opp_overlap 736050, overlap 736050 ACACGTCGCGTACAA GAAAAAACGGGCC GTGC GGCCCGTTTTTTC TTCAACTGAACACCC TERM 580 736050 - 736065 + T 100 -11.8 -5.46657 | opp_overlap 736043 736050 GCGTACAAGAAAAAA CGGGCC GTGC GGCCCG TTTTTTCTTCAACTG TERM 581 736065 - 736050 - T 100 -11.8 -5.55769 | opp_overlap 736050, overlap 736043 GCGTACAAGAAAAAA CGGGCC GTGC GGCCCG TTTTTTCTTCAACTG ompW 736791 - 736105 - | outer membrane protein TERM 582 736547 - 736594 + g 70 -7.4 -3.97139 | gap 1, overlap 736579 ACGTAGTAGCTGGCG CTCAGCGTCGGTGCCGGGCCGCC ATC GACGTCCAGGC-CCGGAGCCGGG TTGTTCTTGGGGTTC TERM 583 736790 - 736805 + g 78 -3.2 -4.89477 | opp_overlap 736791, overlap 736791 ATGGAAATGGAACGC ATGAGG GTCT CCTCAG TTTTGTTGTTAGGCC TERM 584 737007 - 736984 - g 89 -5.2 -5.14563 | gap 1, overlap 736996 GCCGTGACGAAAAAA CGC-GTCAACC AAG GGCTGCCAGCG CACATTCGCAGCGAT XOO0718 736933 - 737493 + | hypothetical protein XOO0719 737675 - 738433 + | hypothetical protein TERM 585 739852 - 739813 - g 76 -5.7 -4.56133 | opp_overlap 739819, overlap 739807 739816 CCTCAACAAGGAAAA CGAGAAGGCGGGCAT CAAGCTCACC ATGCTCGCCTTCCTG GTCAAGGCCAGCGCC phdB 738563 - 740356 + | dihydrolipoamide acetyltransferase TERM 586 740937 - 740925 - g 70 -6.2 -4.33004 | AGGCAATGAAAAGAA GCGC GACAA GCGC TGGACCCAAATCGAA XOO0721 740353 - 741000 + | hypothetical protein TERM 587 741911 - 741886 - g 73 -11.9 -3.41602 | gap 1 CCCATGGGACGACAA GCGCGT-GATGG ACT CCACCGACGCGC TGGAGCTGCACGACA lpdA 741017 - 742840 + | dihydrolipoamide dehydrogenase XOO0723 742902 - 743192 + | hypothetical protein TERM 588 743288 - 743256 - T 85 -15 -3.55761 | gap 1, opp_overlap 743247 743264, overlap 743259 743261 743264 CACGCATCGGTTAAA CGACAGAACCCCGCA TCGC TGCGGGGTTCTG-CA TGAAGCTGCTTTTCG TERM 589 743286 - 743259 - T 93 -20 -2.91144 | opp_overlap 743247 743264, overlap 743256 743261 743264 GCATCGGTTAAACGA CAGAACCCCGCA TCGC TGCGGGGTTCTG CATGAAGCTGCTTTT TERM 590 743284 - 743261 - T 84 -16.8 -3.00704 | opp_overlap 743247 743264, overlap 743259 743256 743264 ATCGGTTAAACGACA GAACCCCGCA TCGC TGCGGGGTTC TGCATGAAGCTGCTT TERM 591 743264 - 743281 + T 74 -12.7 -3.35996 | opp_overlap 743261 743259 743256 743264, overlap 743247 GGTTAAACGACAGAA CCCCGCA TCGC TGCGGGG TTCTGCATGAAGCTG TERM 592 743281 - 743264 - T 77 -12.7 -3.6471 | opp_overlap 743264 743247, overlap 743261 743259 743256 GGTTAAACGACAGAA CCCCGCA TCGC TGCGGGG TTCTGCATGAAGCTG XOO0724 744143 - 743331 - | hypothetical protein TERM 593 743599 - 743626 + g 80 -12 -3.72695 | gap 1, opp_overlap 743593 743592, overlap 743600 GCCGTAAAGCGGATA CCGACGACCGGCG CAG CGCCG-TCGTCGC TTTCGTCCACGACAT TERM 594 743600 - 743625 + g 80 -15.5 -2.83403 | gap 1, opp_overlap 743593 743592, overlap 743599 CCGTAAAGCGGATAC CGACGACCGGCG CAG CGCCG-TCGTCG CTTTCGTCCACGACA TERM 595 744452 - 744423 - H 100 -12.1 -4.86033 | overlap 744411 744424 744426 AAATGCTTACAAAAA GCAGGAGCCCCGG TCTC CCAGGGCTCCTAG ACGCGGCCTGCGGCG TERM 596 744451 - 744424 - H 85 -15.6 -3.50535 | overlap 744411 744423 744426 AATGCTTACAAAAAG CAGGAGCCCCGG TCTC CCAGGGCTCCTA GACGCGGCCTGCGGC TERM 597 744449 - 744426 - H 88 -16 -3.31915 | overlap 744424 744423 TGCTTACAAAAAGCA GGAGCCCCGG TCTC CCAGGGCTCC TAGACGCGGCCTGCG TERM 598 744995 - 745009 + G 70 -2.1 -4.6902 | gap 1, overlap 745006 CTTTGTTGGCAGGTA TC-GCC ATCG GGCTGA TTTTTCAGGTTCTGG XOO0725 744607 - 745041 + | hypothetical protein atpB 745067 - 745867 + | F0F1 ATP synthase subunit A atpE 745940 - 746242 + | F0F1 ATP synthase subunit C atpF 746357 - 746827 + | F0F1 ATP synthase subunit B atpH 746831 - 747358 + | F0F1 ATP synthase subunit delta TERM 599 748075 - 748056 - g 88 -9.2 -4.65747 | CAAGCTGGAAGAAAA CGGCGCGC TGGC GCACACCG TGGTGGTGGCTGCGA atpA 747406 - 748953 + | F0F1 ATP synthase subunit alpha atpG 749147 - 750010 + | F0F1 ATP synthase subunit gamma atpD 750155 - 751561 + | F0F1 ATP synthase subunit beta atpC 751705 - 752127 + | F0F1 ATP synthase subunit epsilon TERM 600 752200 - 752231 + F 100 -16.7 -4.60041 | opp_overlap 752194 752197 752206, overlap 752206 TGCAGAAGAGAACGT CGGAAACGCCGAC CATCGT GTCGGCGTTTTCG TTTTTGGAGATGCGT TERM 601 752225 - 752206 - f 73 -10.7 -3.58801 | opp_overlap 752200 752206, overlap 752194 752197 AGAGAACGTCGGAAA CGCCGAC CATCGT GTCGGCG TTTTCGTTTTTGGAG TERM 602 752206 - 752225 + F 100 -10.7 -4.77757 | opp_overlap 752194 752206 752197, overlap 752200 AGAGAACGTCGGAAA CGCCGAC CATCGT GTCGGCG TTTTCGTTTTTGGAG pheA 752359 - 752931 + | chorismate mutase XOO0735 753837 - 753454 - | hypothetical protein glmU 753820 - 755346 + | UDP-N-acetylglucosamine pyrophosphorylase TERM 603 755388 - 755370 - TR 74 -11.7 -3.50393 | overlap 755347 755346 755372 CTGCATCGCAGAGAA CAGCGCC GCTCT GGCGCTG ATGGCGCTTGGCGGC TERM 604 755405 - 755372 - TR 72 -11.6 -3.32698 | gap 1, overlap 755347 755346 755370 GCATCGCAGAGAACA GCGCCGCTCTGGCGC TGATG GCGCTTG-GCGGCGC GACCCATCCAAGCGC styS 755823 - 755674 - | histidine kinase-response regulator hybrid protein XOO0738 755854 - 756075 + | transposase XOO0739 757088 - 756072 - | transposase TERM 605 756203 - 756187 - G 74 -10.1 -3.70902 | opp_overlap 756182, overlap 756188 CGGGTCAGATCGAAA CGGCGGT TGA ACCGCCA CATCGTCTCTGCCAG TERM 606 756936 - 756921 - G 74 -4.6 -4.55697 | ACGCGGACAAACAAA GCCCTG TGGC CAGCGC GAGATCTCCAACGCC XOO0740 757305 - 757712 + | transposase XOO0743 758967 - 759242 + | hypothetical protein ycfV 759390 - 759214 - | ABC transporter ATP-binding protein ybjY 760836 - 759448 - | ABC transporter permease TERM 607 760839 - 760811 - Gg 84 -15.3 -3.36327 | overlap 760812 760814 TTATGGGAGTGACAA GCAGTGTCCGCAG TGT CCGCGGACACTGG CGGCGGACACGCTGT TERM 608 760838 - 760812 - Gg 86 -18.8 -2.61582 | overlap 760811 760814 TATGGGAGTGACAAG CAGTGTCCGCAG TGT CCGCGGACACTG GCGGCGGACACGCTG TERM 609 760836 - 760814 - Gg 80 -15.6 -2.8474 | overlap 760812 760811 TGGGAGTGACAAGCA GTGTCCGCAG TGT CCGCGGACAC TGGCGGCGGACACGC glmS 760789 - 762756 + | D-fructose-6-phosphate amidotransferase TERM 610 762799 - 762837 + FH 72 -12.4 -3.29471 | GACCCGTGTGCGCGT CGGCGTTGGCACTTGCAT AGT GTGCGGGTGCTGGCGTCG TTACTGTGCTGAGCA XOO0747 763138 - 763611 + | hypothetical protein TERM 611 764227 - 764249 + G 74 -4.8 -4.56597 | overlap 764209 764208 764228 GAAGCCACTGCAGTG GCACCAGC GTTTGCG GCTGGTGA TTTTTCGAAAGCAAC XOO0748 763843 - 764418 + | hypothetical protein XOO0749 764424 - 764663 + | transposase XOO4728 765726 - 764758 - | putative transposase TERM 612 765027 - 765016 - G 76 -2.2 -4.8622 | overlap 765017 GGCGGCAATGAAAAA TGCA GCCT CGCA GCTCTGCAACTCGTC XOO0752 765796 - 766374 + | transposase XOO0753 766487 - 767524 + | putative transposase TERM 613 767581 - 767568 - T 72 -4.5 -4.63932 | overlap 767569 GAGCGGCCAACAAAA CGACT GCGT AGCCG CCAGGCGGGCGCGGC TERM 614 767704 - 767734 + T 78 -11.9 -3.75153 | opp_overlap 767710, overlap 767705 CGGCTCCAAGTCGAA TGAAAATGCCCGG GGAGA CCGGGCATTCTCG TTTGCCTTACGCCAA TERM 615 767705 - 767733 + T 70 -13.2 -2.84878 | opp_overlap 767710, overlap 767704 GGCTCCAAGTCGAAT GAAAATGCCCGG GGAGA CCGGGCATTCTC GTTTGCCTTACGCCA TERM 616 767728 - 767710 - T 100 -11.7 -4.43309 | opp_overlap 767705 767704 CAAGTCGAATGAAAA TGCCCGG GGAGA CCGGGCA TTCTCGTTTGCCTTA TERM 617 767742 - 767756 + T 70 -10 -3.63068 | CATTCTCGTTTGCCT TACGCC AAT GGCGTA TTTGAGATGATCTCG gloA 768298 - 767741 - | lactoylglutathione lyase copB 769528 - 768422 - | copper resistance protein B precursor copA 771441 - 769525 - | copper resistance protein A precursor TERM 618 770726 - 770696 - G 70 -5.2 -4.37886 | opp_overlap 770703, overlap 770697 GCATCGCGTAGAAAA TCGCCCACGGTGCG TTG CGCATCGTTGTCGT GGCTGGGCATCTGTT TERM 619 771426 - 771406 - G 80 -8.2 -4.41548 | overlap 771381 GCATAGCTGAGAAAA CCCACGCA ACGCG CGCGCGGG GCCGATGACGGCCAA XOO0757 771875 - 771459 - | hypothetical protein cysM 771981 - 773114 + | cysteine synthase TERM 620 773560 - 773550 - gf 73 -8.2 -4.08692 | opp_overlap 773550 773549, overlap 773551 CAAGGTGCTGGAAAA CGCG CTG CGCG ATTTCCGCCTGGGCG TERM 621 775075 - 775112 + GF 74 -10.5 -3.74224 | gap 1, opp_overlap 775075, overlap 775076 CGTTTCCGCCATGAA GTGTT-GTCGCGCGGCGG CAG CCGCAGCGCGGCTGACAA TTTCCGTGCTTTCCG TERM 622 775076 - 775111 + GF 74 -14 -2.84053 | gap 1, opp_overlap 775075, overlap 775075 GTTTCCGCCATGAAG TGTT-GTCGCGCGGCGG CAG CCGCAGCGCGGCTGACA ATTTCCGTGCTTTCC prlC 773071 - 775182 + | oligopeptidase A TERM 623 775194 - 775216 + F 100 -22 -3.05596 | opp_overlap 775187 CTGATACAGCGGTAT GGCGCGCCGG TCG CCGGCGCGCC TTCGATGAACGCATG XOO0760 775326 - 776177 + | hypothetical protein TERM 624 776248 - 776284 + T 100 -15.7 -5.40072 | overlap 776249 GCCAGCGTCGTCGCG ACGGCCTGCCTCGGTCC GAT GGCCCTGGGCAGGCCGC TTTTTTTCAGACCCG TERM 625 776249 - 776283 + T 100 -19.2 -3.83561 | overlap 776248 CCAGCGTCGTCGCGA CGGCCTGCCTCGGTCC GAT GGCCCTGGGCAGGCCG CTTTTTTTCAGACCC fabB 777499 - 776291 - | beta-ketoacyl- synthase I fabA 778080 - 777499 - | 3-hydroxydecanoyl-(acyl carrier protein) dehydratase TERM 626 778252 - 778267 + H 78 -6.8 -4.56597 | overlap 778247 778253 CTCGTTGGTTTGCGA TGAGCG GTCG CGCTCG TTTTTCGACCGCGCC TERM 627 778541 - 778498 - g 76 -13.8 -3.14564 | gap 1, opp_overlap 778456 778516 GCAGCCTCCTACGAA GCGCGCACCTTCGGCATTCGC TCG GCGA-TGCCAGCCGTGCGCGC AGAGCGTCTGTGCCC TERM 628 779203 - 779162 - g 82 -4.4 -5.00616 | gap 3 GCCTGGCCGAAAAAA CCTGGCTGGCC-ACACGC-CG CAC CGAGCGTATCGGCC-GCACGG TGGTGCTGAAGTTGA dinP 778330 - 779439 + | DNA polymerase IV gph 779440 - 780231 + | phosphoglycolate phosphatase XOO0765 780941 - 780543 - | hypothetical protein TERM 629 780888 - 780904 + g 75 -13.7 -3.02263 | GCGCAGGCCGACCTG GCGCAGC CAC GCTGCGC TCTTCGGGCCGATGT bioD 781685 - 782419 + | dithiobiotin synthetase TERM 630 782481 - 782454 - T 100 -12.8 -5.4833 | GCAGGCAATAAAAAA GCCCGACAGA GGGAGGGA TCTGTCGGGC CGGATTGCACGGGGG XOO0768 782989 - 782534 - | hypothetical protein TERM 631 783035 - 783019 - R 91 -9.3 -4.61566 | opp_overlap 783019 CCTTAAATCATAAAA GCGGCCC AGT GGGCGGC TTCATGTCAGAGGAC ptps 783520 - 783062 - | 6-pyruvoyl tetrahydrobiopterin synthase rhlE 785282 - 783828 - | ATP-dependent RNA helicase uptA 785590 - 786579 + | fumarylacetoacetate hydrolase uptB 786515 - 787249 + | maleylacetoacetate isomerase uptC 788727 - 787588 - | type II secretion system protein-like protein uptD 788727 - 789203 + | outer membran protein uptE 789200 - 790090 + | outer membrane protein TERM 632 790377 - 790403 + G 89 -13 -4.10744 | gap 1 TCCATTTCCAAGCTC CGCCCCGTGCC TTTGCT GGC-CGGGGCG TTCTTGTTTCAGTGA XOO0776 790306 - 790650 + | hypothetical protein TERM 633 790680 - 790726 + F 100 -17.3 -4.07246 | gap 1, opp_overlap 790673 790674, overlap 790682 TAGAACAAGTTCACC GCCGCGGGCGGTGGC-GGCC TCCTCGTC GGCTTGCCACCGTCCGCGTC TTTAGTTTGCAGTGC TERM 634 790682 - 790724 + F 100 -18.5 -3.62756 | gap 1, opp_overlap 790673 790674, overlap 790680 GAACAAGTTCACCGC CGCGGGCGGTGGC-GGCC TCCTCGTC GGCTTGCCACCGTCCGCG TCTTTAGTTTGCAGT cysB 791039 - 792262 + | cystathionine beta-synthase TERM 635 792854 - 792822 - g 74 -11.3 -3.64703 | overlap 792823 TGGTGTGGATCGAAA CGCCGACCAACCCGA TGC TCAAGCTGGTCGACA TCGCCGCCATTGCGG metB 792353 - 793546 + | cystathionine gamma-lyase-like protein smtA 793593 - 794393 + | hypothetical protein TERM 636 794634 - 794619 - f 78 -5.4 -4.67982 | CGTTACCGAAGAAAA CACCTG GGGC CAAGTG CTCGAAAATTGGCAG TERM 637 795181 - 795204 + F 71 -8.2 -3.94409 | GAAATTTATGAGGAT GGCGAAATCG GGCG TGATTTCGTC TTTATCGATGATGTA TERM 638 796884 - 796872 - g 73 -9.1 -3.89055 | ACAGATGTGGAGAAA GTGCC TCC GGCAC TCGTCGAAAAGGGGC TERM 639 796903 - 796913 + G 86 -3.2 -5.15167 | opp_overlap 796895 TCGAAAAGGGGCTGG TTGC CGC GCAG TTTTTGTTGGTACTG XOO0780 795477 - 797462 + | putative glycosyltransferase wxoC 797764 - 798927 + | putative glycosyl transferase TERM 640 799006 - 799018 + G 71 -4.1 -4.54727 | overlap 798992 CCGCTACCAGCGTGC TGGTG AGC CATCA TTTTGCTTTGGCCAA TERM 641 799474 - 799485 + G 70 -5.8 -4.29508 | overlap 799463 799467 TTCTAGCTGCCACGG CAGC CTTA GCTG TTTATTACTATGGCT wxoD 798933 - 799985 + | putative o-antigen acetylase TERM 642 801550 - 801562 + G 70 -4.8 -4.42238 | TGCGTTATCGGTGTG CTGG AATTG CCAG TTTTCGTTACGCTAC XOO0786 801520 - 801660 + | IS1478 transposase TERM 643 802760 - 802784 + G 79 -5.7 -4.59773 | opp_overlap 802763 GCGTATTTTCCCCAA CGACGATTCGG CGC TCAAATCGTTG TTTTTGGCCGTGCGC tnpX1 801696 - 802901 + | IS1113 transposase TERM 644 803218 - 803231 + G 75 -3.8 -4.67353 | opp_overlap 803204, overlap 803224 ACCTGCGCTGGCTGC TGCG CTGGAT CGCA TTTTTGCGTGCCTGG XOO0788 802956 - 803321 + | IS1478 transposase wzt 804750 - 803431 - | putative ATP binding protein TERM 645 805028 - 805016 - R 80 -5.5 -4.70266 | overlap 805008 AATATCACGCAAAAA TACGC CCA GCGCA GAGAGTAGCCATGCT TERM 646 805111 - 805093 - R 76 -8 -4.26076 | CTAGCGGCAGCAAAA GCGCCGTC ACT GGCGGCAC TCCATAAGATGCGAG TERM 647 805644 - 805615 - R 71 -10.7 -3.53012 | opp_overlap 805606 805615 TTCTTGTCTGCTAAA TCGGAGCTCGCTG GCGC CAGCGAGCCACAA TTTAGTCGATGTTCA etfA 806716 - 805775 - | electron transfer flavoprotein alpha subunit etfB 807462 - 806716 - | electron transfer flavoprotein beta subunit TERM 648 807672 - 807653 - gH 79 -10 -4.07568 | gap 1 TGTGTGGTTTGAAAA CGCAGCGCG GTT CGCG-TGCG ATCAGGAGATCAGCA rmlB 807619 - 808743 + | dTDP-glucose 4,6-dehydratase TERM 649 809036 - 809076 + GF 74 -9.9 -3.76224 | gap 3, opp_overlap 809036 GGAATTCACATTCAA TACGCCGTGCAGCCCAGCCC GGAC GGGTTGG-C-GCA-GGCGTA TTTGATCGGTCGCGA TERM 650 809121 - 809135 + GF 75 -2.9 -4.77036 | AGCCGAGTTGCCTGG TATTG GGCGA CAATA TTTTTCATGGTCACG rmlA 808703 - 809686 + | glucose-1-phosphate thymidylyltransferase rmlC 809683 - 810240 + | dTDP-4-dehydrorhamnose 3,5-epimerase rmlD 810237 - 811145 + | dTDP-4-dehydrorhamnose reductase TERM 651 811188 - 811245 + T 70 -7.79999 -4.07568 | gap 2, opp_overlap 811201 811206, overlap 811201 811206 GTCACTGCTGGCGCC TGATAT-CCGGA-AAGCAAACAGCCGGG AATT CCCGGCTGTTTGCTTATACGGCGCAACC TTTTACAAACGACCG TERM 652 811201 - 811230 + T 100 -22.3 -3.28712 | opp_overlap 811201 811206, overlap 811188 811206 CCTGATATCCGGAAA GCAAACAGCCGGG AATT CCCGGCTGTTTGC TTATACGGCGCAACC TERM 653 811230 - 811201 - T 100 -22.3 -3.59262 | opp_overlap 811201 811188 811206, overlap 811206 CCTGATATCCGGAAA GCAAACAGCCGGG AATT CCCGGCTGTTTGC TTATACGGCGCAACC TERM 654 811225 - 811206 - T 93 -15 -4.06502 | opp_overlap 811206 811201 811188, overlap 811201 TATCCGGAAAGCAAA CAGCCGGG AATT CCCGGCTG TTTGCTTATACGGCG TERM 655 811206 - 811225 + T 93 -15 -3.9941 | opp_overlap 811201 811206, overlap 811201 811188 TATCCGGAAAGCAAA CAGCCGGG AATT CCCGGCTG TTTGCTTATACGGCG xanB 812665 - 811262 - | phosphomannose isomerase; GDP-mannose pyrophosphorylase TERM 656 811475 - 811519 + g 74 -11.4 -3.58343 | gap 1, opp_overlap 811473 811469 CACCACAATCCAATG CTCGGCGCGGTGGTGATGCAT CTGC AGGC-TCAGCACCGCACCGGG TTTGACGGTGATGCG xanA 814226 - 812712 - | phosphoglucomutase; phosphomannomutase TERM 657 812912 - 812885 - GH 70 -12.8 -2.87564 | gap 1 CGAGCTCCGGAGACA GCGACGCGTAATG CTC CATCACGCG-CGC AACCGATGCCTTGGC ipsI 814159 - 814923 + | IpsJ protein ipsJ 814923 - 815552 + | IpsJ protein XOO0800 817250 - 815610 - | hypothetical protein TERM 658 815853 - 815871 + g 77 -8.8 -4.2123 | GAACATGCTGCCGGA CGCGAACA GGC TGTGCGCG TTTATTGCATCCGTG etf-QO 819394 - 817694 - | flavoprotein-ubiquinone oxidoreductase alkB 819459 - 820067 + | DNA repair system specific for alkylated DNA TERM 659 820325 - 820307 - T 75 -13.8 -3.06796 | overlap 820309 GGTGACTTTATTGAA GAGCGCGG ACG CCGCGCCC AGACAATCCACTGGC TERM 660 820323 - 820309 - T 71 -12.8 -3.09327 | overlap 820307 TGACTTTATTGAAGA GCGCGG ACG CCGCGC CCAGACAATCCACTG TERM 661 820359 - 820387 + T 100 -10.1 -5.02074 | opp_overlap 820359 820356 CGTGTTCAAGAACGA GCAGACCGCGTCG AGT CGCCGCTGGCTGC TTTTTTGAAAGCTGC XOO0803 821262 - 820618 - | hypothetical protein XOO0804 822185 - 821259 - | hypothetical protein TERM 662 821610 - 821658 + g 93 -14 -4.1585 | gap 2, opp_overlap 821587 GTCGCGTGCGCTGAC GATCAGCGCCTGCAT-GCCG-TCG TCG TGATCGGCGATGCCGCCGCTGATC TTTTCCAGGTTCTGC TERM 663 821676 - 821697 + g 71 -9.4 -3.78934 | TTCCAGGTTCTGCAG CGTGGCCG AAATGC TGGCCACG TTCTTGTCCGACAGC TERM 664 821964 - 822006 + g 73 -11.8 -3.40403 | TTGGCGTGGGTCGTT CGGCGCCAGGGTCAGCTCGG TGA TCGAGCCGACCGCGATGCCG TTGTACTGCACAGGG yrbF 823030 - 822188 - | ABC transporter ATP-binding protein TERM 665 823062 - 823072 + r 73 -8.2 -4.08767 | opp_overlap 823053 823051 823059 ATACCACGACAAGCG CCGC GCT GCGG TTTTGCACGAATCCC yrbE 824312 - 823116 - | ABC transporter permease TERM 666 823584 - 823557 - G 72 -11.3 -3.53224 | gap 1 GATCTGCGCGGTAAA CGCGCTGG-CGG TGCGC CCGGCCAGCACG ATGGCGGTGAGCAGC TERM 667 824360 - 824373 + H 74 -9.5 -3.89346 | opp_overlap 824350 ATACACTGTCGGCCT CGCCG ACCA CGGCG TTTCTCCGATCCGAC XOO0807 824398 - 825657 + | hypothetical protein TERM 668 825676 - 825712 + T 100 -21.1 -3.64703 | opp_overlap 825686, overlap 825677 825686 GGGGGAAAATGCCGC GCAATAAAAACGCCGGC ATT GCCGGCGTTTTTATTGG TTTGGATCAACCAGC TERM 669 825677 - 825711 + T 100 -24.6 -2.78679 | opp_overlap 825686, overlap 825676 825686 GGGGAAAATGCCGCG CAATAAAAACGCCGGC ATT GCCGGCGTTTTTATTG GTTTGGATCAACCAG TERM 670 825702 - 825686 - T 100 -15.1 -5.06414 | opp_overlap 825677 825676 825686 GCCGCGCAATAAAAA CGCCGGC ATT GCCGGCG TTTTTATTGGTTTGG TERM 671 825686 - 825702 + T 100 -15.1 -5.24551 | opp_overlap 825686, overlap 825677 825676 GCCGCGCAATAAAAA CGCCGGC ATT GCCGGCG TTTTTATTGGTTTGG XOO0808 826183 - 825719 - | DNA-binding protein proS 828017 - 826323 - | prolyl-tRNA synthetase XOO0810 828533 - 828129 - | hypothetical protein pssA 828608 - 829438 + | phosphatidylserine synthase TERM 672 829729 - 829699 - g 70 -11.1 -3.34715 | gap 1, overlap 829697 829700 CACGTGCGCCAAACA CTGCGCCAGCAGCG GCGC CGCAAC-GGCGCAG CCGCGTCGGCATGCC XOO4729 829449 - 829916 + | hypothetical protein TERM 673 830224 - 830236 + G 75 -10.5 -3.87815 | opp_overlap 830206, overlap 830223 CGCCTGCGATCGCGG CGCGC GGC GCGCG TTTCTGGAAGTGCGC rimI 829922 - 830395 + | ribosomal-protein-alanine acetyltransferase TERM 674 830676 - 830710 + F 71 -8.5 -3.91911 | gap 1, overlap 830683 GCGGATCGTGTTGGA GCGCGGACGCGCAGCA GAGA TGCTTTGCC-CCGCGC TTTCCTTGCGATGCG XOO0813 830813 - 831151 + | putative ISXo8 transposase XOO0814 831167 - 832390 + | ISxac1 transposase TERM 675 833526 - 833494 - T 82 -11.1 -4.10552 | CGCGACCAAAGCAAA CGCCGGTCAAGACAC TGG GGGGCCAGACCGGCG CGGGCGGACGCTTTT XOO0817 834715 - 834011 - | putative transposase TERM 676 834280 - 834269 - G 76 -2.2 -4.8622 | overlap 834270 GGCGGCAATGAAAAA TGCA GCCT CGCA GCTCTGCAACTCGTC XOO0818 836511 - 835060 - | putative ISXo8 transposase TERM 677 837856 - 837799 - g 95 -14.9 -4.07687 | opp_overlap 837850, overlap 837802 ACGCCTCGCCGAAAA GACCGGCG-TTGCCGCGGCCGCACAGC CGCTGT ACCGCGCCGCCGCG-CAATCGCCGACC TTCCACGGCTTCTTG TERM 678 837853 - 837802 - g 75 -15.2 -2.78032 | opp_overlap 837850, overlap 837799 CCTCGCCGAAAAGAC CGGCG-TTGCCGCGGCCGCACAGC CGCTGT ACCGCGCCGCCGCG-CAATCGCCG ACCTTCCACGGCTTC slt 836609 - 838726 + | soluble lytic murein transglycosylase TERM 679 838915 - 838950 + T 100 -23.4 -4.3739 | opp_overlap 838916, overlap 838916 ACCGCACCACGCGAA ACGCACAACGCCCGCA TCAC TGCGGGCGTTGTGCGA TTTTATCCGGCACTG TERM 680 838916 - 838949 + T 100 -26.9 -3.22113 | opp_overlap 838916, overlap 838915 CCGCACCACGCGAAA CGCACAACGCCCGCA TCAC TGCGGGCGTTGTGCG ATTTTATCCGGCACT TERM 681 838949 - 838916 - T 100 -26.9 -3.62096 | opp_overlap 838916 838915 CCGCACCACGCGAAA CGCACAACGCCCGCA TCAC TGCGGGCGTTGTGCG ATTTTATCCGGCACT pel 840033 - 838993 - | pectate lyase XOO0822 841564 - 840353 - | putative ISXo8 transposase XOO0823 841527 - 841979 + | putative transposase XOO0824 841945 - 842421 + | putative transposase XOO0825 842458 - 843006 + | putative ISXo8 transposase XOO0826 843387 - 843073 - | SAM-dependent methyltransferase XOO0827 844559 - 843573 - | IS1404 transposase TERM 682 843623 - 843646 + g 93 -3.7 -5.40474 | overlap 843596 843626 843627 ACTGCTGGGCATAGG CCACCGGCG TCATTC CGCCGATTG TTTTTTTGGGGCGGT TERM 683 843626 - 843643 + g 78 -4 -4.79949 | overlap 843596 843623 843627 GCTGGGCATAGGCCA CCGGCG TCATTC CGCCGA TTGTTTTTTTGGGGC TERM 684 845114 - 845102 - R 71 -4.8 -4.42238 | CTAGCGTAACGAAAA CTGG CAGTT CCAG CACGCCAAAACCGCA XOO0829 845280 - 845155 - | hypothetical protein XOO0830 845625 - 845302 - | hypothetical protein valS 848554 - 845612 - | valyl-tRNA synthetase TERM 685 847237 - 847280 + g 71 -10.8 -3.57792 | opp_overlap 847244, overlap 847216 847234 847278 TGATCCAGTTCGGCG GCACGAACTGGATCTGGCCG CTTT CGACCAGTTCCAGCCCGCGC TTTGCCAATGCGTCC TERM 686 847273 - 847244 - G 76 -14.3 -3.14132 | opp_overlap 847216 847234 847237 GTTCGGCGGCACGAA CTGGATCTGGCCG CTTT CGACCAGTTCCAG CCCGCGCTTTGCCAA TERM 687 848780 - 848806 + r 73 -10.8 -3.54424 | overlap 848788 CATGTCGTACTTGGT CAGTTCCAGGCC CAG GGCCTTGTACTG TTTCCAACGCTCGCG holC 849187 - 848762 - | DNA polymerase III subunit chi XOO4730 849533 - 849228 - | hypothetical protein pepA 851005 - 849533 - | leucyl aminopeptidase TERM 688 853170 - 853184 + G 71 -4.2 -4.57073 | overlap 853172 TTCGCGCTGGGCTTC TGGCTG CTG CAGCTG TTTTTCGGCCGCATG XOO0836 852108 - 853298 + | hypothetical protein TERM 689 853553 - 853582 + G 70 -2.1 -4.63932 | gap 1, overlap 853540 TGCTGTATGCGTTTG GGCATGCAGTTCAG TGG TTGA-TTGCGCGCC TTTTGTTGGGCGCTC XOO0837 853444 - 853602 + | hypothetical protein XOO0838 854180 - 853713 - | hypothetical protein TERM 690 854209 - 854236 + H 74 -9.8 -3.71649 | gap 1 CGGTCGCCAGTCACT GTGCAACG-CCGC GCT GCGGTCGCTGCGC TTTGGCATTTGCCCG TERM 691 854772 - 854800 + G 74 -10.2 -3.73775 | gap 1, overlap 854773 GATCTGGAAGGGTTG GCG-CGCTGGCGC GCCG GCGCCGGCGGCGG TTTGCTCGGCATCGA TERM 692 854773 - 854799 + G 73 -13.7 -2.84051 | gap 1, overlap 854772 ATCTGGAAGGGTTGG CG-CGCTGGCGC GCCG GCGCCGGCGGCG GTTTGCTCGGCATCG xerD 854607 - 855578 + | site-specific tyrosine recombinase XerD TERM 693 856827 - 856797 - g 72 -8.9 -4.08216 | gap 1, opp_overlap 856824, overlap 856798 TGAGGCGCTGGAAAA GCGCGCCGTCGCCA CGGC CGGCGGCAGC-CGC TGATCCACGGCGGAG dsbC 856033 - 856830 + | disulfide isomerase TERM 694 856892 - 856931 + F 100 -13.6 -5.00616 | opp_overlap 856894 856899, overlap 856893 856894 856896 TGGCCGGCGCGATCG AACGGAAGGCTGGAATGC AGAT GCATTCCGGCCTTCTGCG TTTTTTGGGGCAGGC TERM 695 856893 - 856930 + F 100 -17.1 -3.60048 | opp_overlap 856894 856899, overlap 856892 856894 856896 GGCCGGCGCGATCGA ACGGAAGGCTGGAATGC AGAT GCATTCCGGCCTTCTGC GTTTTTTGGGGCAGG TERM 696 856929 - 856894 - f 84 -16.2 -3.05384 | opp_overlap 856893 856892 856894 856896, overlap 856899 GCCGGCGCGATCGAA CGGAAGGCTGGAATGC AGAT GCATTCCGGCCTTCTG CGTTTTTTGGGGCAG TERM 697 856894 - 856929 + F 91 -20.6 -2.75708 | opp_overlap 856894 856899, overlap 856893 856892 856896 GCCGGCGCGATCGAA CGGAAGGCTGGAATGC AGAT GCATTCCGGCCTTCTG CGTTTTTTGGGGCAG TERM 698 856896 - 856927 + F 93 -19.6 -2.92111 | opp_overlap 856894 856899, overlap 856894 856893 856892 CGGCGCGATCGAACG GAAGGCTGGAATGC AGAT GCATTCCGGCCTTC TGCGTTTTTTGGGGC TERM 699 856924 - 856899 - f 73 -13.3 -3.19192 | opp_overlap 856896 856894 856893 856892, overlap 856894 CGCGATCGAACGGAA GGCTGGAATGC AGAT GCATTCCGGCC TTCTGCGTTTTTTGG TERM 700 857423 - 857447 + G 85 -17.1 -2.94099 | TGCTGCGCCCGCCGT GCGCGATGCGG ATG CCGCTTCGCGC TATGTGGTGCCGCGG TERM 701 858148 - 858098 - g 81 -14 -3.47349 | gap 2, overlap 858083 GGTGGAAACGCATAA CCACCCG-ACC-GCGATCGCACCG TTCCC CGGCGCGGCCACCGGTGCGGGCGG CGAAATTCGCGACGA TERM 702 858492 - 858479 - g 71 -8.1 -4.12902 | CAATCAGGTCGAAAA GCTGC GCCT GCAGC CGGGCGATGCGGTGA TERM 703 859981 - 859999 + G 72 -8.8 -4.1711 | overlap 859982 TGCCGGATCTGGACG ATGCGCAG CGT CTGCGCAG TTTCTTCGAGCTGAT purL 857229 - 861281 + | phosphoribosylformylglycinamidine synthase TERM 704 861317 - 861355 + F 90 -13.9 -4.08767 | gap 1, overlap 861319 861322 GCCGCTGATGCCTCA C-TCGACGGCCGTGTGCA GGGA TGCACGCGGCCGTTGTCG TTTTGGCAGAGTGCG TERM 705 861319 - 861352 + F 93 -21.1 -3.08211 | overlap 861317 861322 CGCTGATGCCTCACT CGACGGCCGTGTGCA GGGA TGCACGCGGCCGTTG TCGTTTTGGCAGAGT TERM 706 861322 - 861349 + F 100 -19.2 -3.68359 | overlap 861319 861317 TGATGCCTCACTCGA CGGCCGTGTGCA GGGA TGCACGCGGCCG TTGTCGTTTTGGCAG TERM 707 861886 - 861901 + F 91 -4.6 -5.30339 | overlap 861887 ATCAAGTCTGCAGGT GTCCCG TGAA CGGGAA TTTTTGTCTTTTCCT TERM 708 862700 - 862675 - g 76 -9.7 -4.10657 | gap 1 CCAGAGCGGCGAAAA CGGCGT-GGCAC CTG GTGCCAATGCCG GCGTGAGCGGCGCAA TERM 709 862826 - 862860 + G 76 -14.3 -3.13403 | gap 1, overlap 862823 GTCAATGCCACCGAT GCGGTCAACGTGGCGC AGCT GCGCCACGT-GGCCGA TGTTGCTGAAAACAC TERM 710 865283 - 865257 - g 76 -14.4 -3.07816 | CTGCGATCGATGCAA CGGCCGGTGTGC AGG GCACACCCACCG CCGCCGTGGTCGGCA xadA 862259 - 866056 + | outer membrane protein TERM 711 866071 - 866099 + F 79 -15.2 -2.87931 | opp_overlap 866072 AGCGTAATTGCATCA ACGCGGCGGCGC CAGGT GCGCCGTCGCGA TGTGTAAAGCCTGAG TERM 712 866098 - 866072 - f 86 -16.5 -3.18681 | opp_overlap 866071 GCGTAATTGCATCAA CGCGGCGGCGC CAGGT GCGCCGTCGCG ATGTGTAAAGCCTGA xpsE 868333 - 870015 + | general secretion pathway protein E TERM 713 870508 - 870492 - g 88 -2.2 -5.27779 | CCGAAGACGAAAAAA GCCG GCGGGTGAT CGGC GATGTGCGCGATACC xpsF 870191 - 871408 + | general secretion pathway protein F xpsG 871616 - 872107 + | general secretion pathway protein G xpsH 872117 - 872626 + | general secretion pathway protein H xpsI 872623 - 873039 + | general secretion pathway protein I xpsJ 873036 - 873671 + | general secretion pathway protein J xpsK 873614 - 874519 + | general secretion pathway protein K xpsL 874492 - 875637 + | general secretion pathway protein L xpsM 875591 - 876274 + | general secretion pathway protein M TERM 714 876493 - 876456 - g 76 -6.2 -4.56597 | overlap 876458 GGCGCGTTCGAAAAA TATTCGGAAATCGCCG CGCATC CGGCGTTCGCCGAAGA CCGCCTGCCGCATCC TERM 715 876936 - 876908 - g 85 -16.7 -3.01712 | GCCGCCGGTGCAACA GCCCGGCTGGCAG GCA CTGCCAACCGTGC AGCCGCAGCGTAGCG xpsN 876264 - 877079 + | general secretion pathway protein N xpsD 877076 - 879388 + | general secretion pathway protein D XOO0858 879385 - 880224 + | hypothetical protein XOO0859 881376 - 880648 - | putative transcriptional regulator TERM 716 881504 - 881472 - R 79 -8.4 -4.37658 | gap 1, opp_overlap 881471 881470 881465, overlap 881459 AACGCGTGCACAAAA CGCGCCTGGCTCAGC GTGC GCT-AGCCAGGTTCG GGTTCTGTTGGGTTT XOO0860 882324 - 881482 - | putative transporter TERM 717 882147 - 882123 - G 75 -4.1 -4.63218 | GGGCGGCTAACAAAA CCACTGCGCAG TCG CCATGCAGGGG CGTCCAGTGCGCGGT TERM 718 882197 - 882184 - G 70 -2.3 -4.59109 | opp_overlap 882187 TACATCTCGCAAAAA CTCCG GTTC CGCAG CGCCGTTCATACCCG bfrC 884634 - 882433 - | iron receptor XOO0862 885845 - 884631 - | hypothetical protein TERM 719 886207 - 886171 - H 73 -10.7 -3.60818 | opp_overlap 886196, overlap 886162 TCAAAATGTCGTAAA CGGAGACCGCACGGCGG CTC CCGACGCGCAGTATGCG CTTTGCCAGCATGGG TERM 720 886620 - 886662 + G 73 -9.6 -3.85698 | opp_overlap 886629, overlap 886622 886623 886625 CGGTTTCGCCACTGC GTGCAATCAGGGCGCGCGCG ACT CGCAGGCGCCCTGGCTGGTC TTTATCAACCCCGAC TERM 721 886623 - 886659 + G 71 -14.3 -2.70946 | opp_overlap 886629, overlap 886622 886620 886625 TTTCGCCACTGCGTG CAATCAGGGCGCGCGCG ACT CGCAGGCGCCCTGGCTG GTCTTTATCAACCCC TERM 722 886653 - 886629 - g 75 -14.9 -2.71144 | opp_overlap 886625 886623 886622 886620 CACTGCGTGCAATCA GGGCGCGCGCG ACT CGCAGGCGCCC TGGCTGGTCTTTATC TERM 723 887051 - 887085 + G 84 -7 -4.7373 | overlap 887052 ACGATCTGCAGGTAG TGCATGTGCGCGGC GTCTCCA GCCGCGCGCGGCCA TTTTTCGTGGAGTGG XOO0863 886474 - 887238 + | putative glycosyl transferase XOO0864 887280 - 888068 + | putative transposase XOO4731 888167 - 888069 - | transposase XOO0865 888318 - 888593 + | putative transposase TERM 724 889033 - 889072 + T 73 -10.7 -3.64703 | overlap 889035 889042 CGCCCGTGAGGACGC GACGTGGCGCGAGCGCT ATAACA AGCGCTCGTTCTACGTG TTTCAATCCACGCGC TERM 725 889035 - 889070 + T 76 -13.3 -3.40597 | overlap 889033 889042 CCCGTGAGGACGCGA CGTGGCGCGAGCGCT ATAACA AGCGCTCGTTCTACG TGTTTCAATCCACGC TERM 726 889042 - 889063 + T 74 -11.6 -3.452 | overlap 889035 889033 GGACGCGACGTGGCG CGAGCGCT ATAACA AGCGCTCG TTCTACGTGTTTCAA TERM 727 889076 - 889124 + T 70 -11.9 -3.16935 | gap 3, opp_overlap 889083, overlap 889079 TCGTTCTACGTGTTT C-AATCCACGCGCCCGTGAGGACG CGAC CG-CTTCACGGGC-CGTGGATACG TTACTACCCATGTTT TERM 728 889079 - 889120 + T 86 -18.2 -2.56715 | gap 2, opp_overlap 889083, overlap 889076 TTCTACGTGTTTCAA TCCACGCGCCCGTGAGGACG CGAC CG-CTTCACGGGC-CGTGGA TACGTTACTACCCAT XOO0866 892995 - 892705 - | hypothetical protein XOO0867 894083 - 893010 - | hypothetical protein XOO0868 894679 - 894047 - | endonuclease TERM 729 894511 - 894544 + gr 95 -19.5 -3.14132 | TGACGGTGCGCACGC CGCGCCGACGCTCGG CCTG CGGCGCGTCGGCGCG TTGATGCAGCAAGCG XOO0869 895565 - 894699 - | hypothetical protein XOO0870 897406 - 895562 - | hypothetical protein XOO0871 898077 - 897403 - | hypothetical protein TERM 730 898151 - 898131 - R 71 -4.8 -4.41348 | gap 1, opp_overlap 898115 898133 898134, overlap 898115 898134 GCTGCGTTAAATAAA TAA-GCAGC ATTC GCTGCCTTA TTGGCGGCGCCAGCA TERM 731 898147 - 898134 - R 79 -8.1 -4.32678 | opp_overlap 898115 898134 898133, overlap 898115 898131 GCGTTAAATAAATAA GCAGC ATTC GCTGC CTTATTGGCGGCGCC XOO0872 900496 - 898205 - | hypothetical protein TERM 732 899134 - 899176 + g 77 -14.8 -2.85712 | overlap 899107 899132 GTTCCTCAGCCAGCG CGTCGTCTTCCAGTGCGCCA ACA TGGCGCACCCGGACGCGACG TAGTTGTGCATATAG TERM 733 900710 - 900725 + G 74 -4.6 -4.55697 | GGCGTTGGAGATCTC GCGCTG TCCA CAGGGC TTTGTTTGTCCGCGT XOO0874 900621 - 901247 + | transposase TERM 734 901444 - 901460 + G 74 -10.1 -3.70902 | opp_overlap 901439, overlap 901445 CTGGCAGAGACGATG TGGCGGT TCA ACCGCCG TTTCGATCTGACCCG XOO0875 901294 - 901575 + | transposase maf 902541 - 901966 - | Maf-like protein XOO0877 902513 - 903163 + | hypothetical protein rpmF 903262 - 903456 + | 50S ribosomal protein L32 TERM 735 903466 - 903489 + F 74 -14.6 -2.68419 | gap 1, overlap 903459 903458 GATTGATCCGTGGCG CCC-GCCGCGT TCG ACGCGGCCGGG TGATCTCGCTTCTTC fabH 903546 - 904523 + | 3-oxoacyl-(acyl carrier protein) synthase III TERM 736 904898 - 904914 + G 74 -5 -4.55295 | opp_overlap 904898, overlap 904904 TGCTTGCGCACGATA CCGCTG CAGAC CCGCGG TTTGTTTATGCGAAC XOO0879 904753 - 905193 + | hypothetical protein fabD 905471 - 906415 + | acyl-carrier-protein S-malonyltransferase fabG 906384 - 907241 + | 3-ketoacyl-(acyl-carrier-protein) reductase TERM 737 907333 - 907354 + F 95 -10.1 -4.431 | opp_overlap 907330, overlap 907334 TACACTATCCAACGC GGCCATCGC AGCG GCGATGGCG TTTTGTGAGTCCCTC TERM 738 907334 - 907353 + F 77 -13.6 -3.25378 | opp_overlap 907330, overlap 907333 ACACTATCCAACGCG GCCATCGC AGCG GCGATGGC GTTTTGTGAGTCCCT TERM 739 907501 - 907477 - g 70 -2.7 -4.64334 | overlap 907479 907491 AACGCGTCAAGAAAA TCGTCGTCGAA CAA CTCGGCGTCAA GGAAGAGGAAGTCAC acpP 907446 - 907685 + | acyl carrier protein TERM 740 907741 - 907766 + F 100 -14.7 -4.58663 | CCGCGTCAGACATTC CATGGGGCCGC TGAT GCGGCCCTGTG TTTTTCAAGCGTCAT fabF 907764 - 909062 + | 3-oxoacyl-(acyl carrier protein) synthase II TERM 741 909430 - 909442 + G 73 -9.1 -3.86015 | CGGCGAGGGGCAACT GCTGG AAG CCAGC TTTCTGGGCGCGCTG TERM 742 910559 - 910542 - g 86 -14.1 -3.73775 | opp_overlap 910539 GCGAGTTGGACGAAA CCCGCGC CAAG GCGCGGG GCGTGTTGCGCGCGA trpE 909233 - 910588 + | hypothetical protein XOO0885 910649 - 911722 + | hypothetical protein holB 911719 - 912678 + | DNA polymerase III subunit delta' pilZ 912675 - 913028 + | type IV fimbriae assembly protein TERM 743 913403 - 913416 + F 100 -9.5 -4.84492 | GAGTCAAATGGTGGG CCGGC GAAA GCCGG TTTTCTTGTAGTTGC TERM 744 913891 - 913869 - f 78 -12 -3.75153 | opp_overlap 913866 913865 TTTCGGGAATGCAAA GCTGCCGC TTCGATG GCGGCAGC TGGATCTTGTTCCTG XOO0890 914984 - 915373 + | hypothetical protein prpR 917384 - 915609 - | propionate catabolism regulatory protein TERM 745 916881 - 916913 + gF 72 -12.8 -3.06796 | opp_overlap 916848 GGTGACCACGCCGAT GCG-TGGCGCGATGCG GCG CGCA-CGCGCCAGTGC TTCCATCAGATCGAA prpB 917353 - 918249 + | 2-methylisocitrate lyase prpC 918310 - 919479 + | methylcitrate synthase TERM 746 920930 - 920878 - g 74 -11.2 -3.67517 | gap 1, opp_overlap 920880, overlap 920869 CACCAACACCTCAAA CCCGCGCAACGTCATTGC-CGCCGG CTTG CTGGCGCGCAATGCCAATGCACGTG GCTTGACCCGCAAAC acnA 919646 - 922237 + | aconitate hydratase TERM 747 922286 - 922253 - f 73 -11 -3.64703 | overlap 922254 GGGTGCTGATGGAAA CGCCCCAGTCGGCA TGCACC TGCCAAATGGGGCA CACACGTTGGCAATC XOO0895 922560 - 922697 + | hypothetical protein XOO0896 922970 - 924169 + | hypothetical protein fyuA 924669 - 926885 + | TonB-dependent receptor TERM 748 926913 - 926934 + F 100 -15.1 -6.22802 | opp_overlap 926913 TGTAGCAACATCCAA CCGCCGGCG ATCA TGCCGGCGG TTTTTTTTTATGGCA TERM 749 926934 - 926913 - f 80 -14.4 -3.20348 | opp_overlap 926913 TGTAGCAACATCCAA CCGCCGGC GATCAT GCCGGCGG TTTTTTTTTATGGCA XOO0898 926925 - 927962 + | inosine-uridine preferring nucleoside hydrolase XOO0899 928254 - 928072 - | hypothetical protein XOO0900 928287 - 929009 + | hypothetical protein TERM 750 929087 - 929060 - f 72 -2.7 -4.68994 | gap 2, overlap 929062 AGTATTACCGAAAAA GTCCGGTAGCGCG CAAG CGCGCT-CCT-AC GCAGGCCCCGGATTC fecA 929234 - 932221 + | TonB-dependent receptor glpQ 932522 - 933343 + | glycerophosphodiester phosphodiesterase TERM 751 934025 - 934001 - gf 80 -8.4 -4.3534 | GGCCAATCACGAAAA GGCCGCCGCC GCATT GGCGGGTGCC GATGTCGCTGTCGCT XOO0903 933669 - 934382 + | hypothetical protein XOO0904 934342 - 935400 + | putative ISXo8 transposase XOO0905 935541 - 935768 + | putative ISXo8 transposase tnpA 936060 - 937076 + | transposase TERM 752 937233 - 937258 + T 71 -11.1 -3.44284 | overlap 937231 CGATCCAGCCTTCCC GCATGTCGGCG CATT CGTCGGCGTGC TCTTCTTCCTGCGCC XOO0907 937770 - 937210 - | bacterioferritin XOO0908 938295 - 937813 - | peroxiredoxin hspA 938359 - 938934 + | low molecular weight heat shock protein TERM 753 939297 - 939322 + F 100 -11.1 -5.40072 | CCTGGCTGCTCGAAC TGGCTCGTGGC CTCG GCTGCGGGCCA TTTTTTTCCCAGAGG TERM 754 939425 - 939412 - g 83 -9.5 -4.3467 | ATGCGGAGATCAAAA CCGCC TACC GGCGG CTCGCGCGCAAATAT cbpA 939345 - 940244 + | curved DNA binding protein pilH 940484 - 940870 + | PilH family regulatory protein TERM 755 940990 - 941047 + F 71 -11.1 -3.51924 | gap 1, opp_overlap 940976 ACGGTTGGCGTGCCG GTGGCACGCGTGCCCTTGAGCGCCCGTG CCG CAAGGGCGTGCCGGGGTGCGTA-GCCAC TTCTCTGCCTGAAAC hflK 941449 - 942627 + | integral membrane protease subunit hflC 942627 - 943490 + | integral membrane proteinase subunit TERM 756 943538 - 943556 + F 100 -10.2 -5.24531 | opp_overlap 943538 GCCTGAACGAAAAAA CGCCCGCG TCA TGTGGGCG TTTTTTATGCGCCAT TERM 757 943556 - 943538 - f 100 -7.3 -5.26875 | opp_overlap 943538 GCCTGAACGAAAAAA CGCCCGC GTCAT GTGGGCG TTTTTTATGCGCCAT TERM 758 943711 - 943653 - f 84 -17.2 -2.752 | opp_overlap 943655 943660, overlap 943652 943655 ATGTCCAGATACAAT GAGCGCACCCGGGCGCGACCTGCTGTTC CCG GTAATGCCCGTCGCGCCGGGGTTCGCTC CTCTCCGTCGCGGGT TERM 759 943655 - 943709 + F 71 -14 -2.64616 | opp_overlap 943652 943653 943655, overlap 943660 GTCCAGATACAATGA GCGCACCCGGGCGCGACCTGCTGTTC CCG GTAATGCCCGTCGCGCCGGGGTTCGC TCCTCTCCGTCGCGG TERM 760 943709 - 943655 - f 74 -14 -2.91997 | opp_overlap 943655 943660, overlap 943652 943653 GTCCAGATACAATGA GCGCACCCGGGCGCGACCTGCTGTTC CCG GTAATGCCCGTCGCGCCGGGGTTCGC TCCTCTCCGTCGCGG XOO0914 943784 - 943969 + | hypothetical protein TERM 761 944702 - 944667 - g 79 -6.6 -4.57073 | opp_overlap 944687, overlap 944668 CAGGCGCGCGAAAAA GCGGCCGGCGGCAAGG CCAT CGGCACCACCGGCCGT GGTATCGGCCCGGCC purA 944124 - 945599 + | adenylosuccinate synthetase TERM 762 945651 - 945624 - f 74 -14.2 -2.54896 | opp_overlap 945629, overlap 945620 945629 GCGTGAGTGAAGCGA CAAAAGCCCTGC GAAA GCGGGGCTTTTG TGTGCGTGATGCTGT TERM 763 945646 - 945629 - f 84 -8.3 -4.47551 | opp_overlap 945629, overlap 945624 945620 AGTGAAGCGACAAAA GCCCTGC GAAA GCGGGGC TTTTGTGTGCGTGAT TERM 764 945629 - 945646 + F 95 -10.5 -4.55689 | opp_overlap 945629 945624 945620 AGTGAAGCGACAAAA GCCCTGC GAAA GCGGGGC TTTTGTGTGCGTGAT TERM 765 946599 - 946575 - g 76 -14.3 -3.14132 | opp_overlap 946565 946563 GGCCGGTGGCATGAA GCGCGTGGTCT TCC AGACCACGCCC AAGATGTCCACGTAT pepN 945925 - 948597 + | aminopeptidase N TERM 766 948639 - 948621 - T 81 -4.4 -5.03994 | overlap 948622 GTTGAGATACAAAAA GCCCGGTA TTT TCCGGGGC GAATTCAACTCCGAT XOO0917 949573 - 948791 - | IS1595 transposase XOO0918 950682 - 949684 - | IS1478 transposase XOO0919 951144 - 950689 - | IS1478 transposase XOO0920 951304 - 951939 + | hypothetical protein msi147 951939 - 952376 + | hypothetical protein XOO0922 953225 - 953422 + | hypothetical protein XOO4733 953447 - 954544 + | glycosyltransferase XOO0924 954525 - 955859 + | membrane protein htrB 957013 - 956093 - | lipid A biosynthesis lauroyl acyltransferase kdtA 957090 - 958406 + | 3-deoxy-D-manno-octulosonic-acid transferase TERM 767 958640 - 958657 + T 74 -2.5 -4.87665 | opp_overlap 958642, overlap 958641 958642 CATCGCGCAAAAAAA AACGGGC CTAG GCCCGCC TTTTTGTGCATCCAG TERM 768 958655 - 958642 - T 100 -9.5 -6.06723 | opp_overlap 958641 958640 958642 TCGCGCAAAAAAAAA CGGGC CTAG GCCCG CCTTTTTGTGCATCC tolC 960058 - 958679 - | hypothetical protein TERM 769 959000 - 959024 + g 72 -11.4 -3.45023 | GGTCTGGTAGGCATT GCGCGTGTTG CGATC CAGCGCGCGC TTCTGCTGCTCGTAG pcm 960750 - 960079 - | L-isoaspartate protein carboxylmethyltransferase XOO0929 961517 - 960864 - | transcriptional regulator TERM 770 962205 - 962219 + G 77 -12.8 -3.35679 | AGCGCCCTGCTGCGG CGCGCC GAC GGCGCG TTGTGGGTGGGCACG XOO0930 961737 - 962249 + | hypothetical protein XOO0931 962284 - 962421 + | hypothetical protein XOO0932 963110 - 962418 - | transposase TERM 771 962549 - 962533 - GT 74 -10.1 -3.70902 | opp_overlap 962528, overlap 962534 CGGGTCAGATCGAAA CGGCGGT TGA ACCGCCA CATCGTCTCTGCCAG XOO4734 963417 - 962857 - | transposase TERM 772 963117 - 963145 + gr 77 -13.1 -3.35996 | opp_overlap 963110 963119, overlap 963123 CAGATACATGCCAAG CAGCCAGGTGCCG TAG CGGCAGCTTGCTG TTGTCCATCACCGTG TERM 773 963283 - 963268 - GR 74 -4.6 -4.55697 | ACGCGGACAAACAAA GCCCTG TGGC CAGCGC GAGATCTCCAACGCC XOO0935 965267 - 964377 - | LysR family transcriptional regulator TERM 774 964788 - 964807 + g 72 -11.4 -3.53224 | opp_overlap 964757, overlap 964749 964787 GTGCCAGATCGGCTG CGCGCGCA GTGG TGCGTGCG TTTCGGGCGCCAGTG TERM 775 966748 - 966775 + G 70 -4.8 -4.45083 | gap 1 TGGTCAGCCCGGCGA TGGCCGCTGCAGC AGC GGTG-AGCGGGCA TTTTGTCGATGTGCG leuC 965382 - 966830 + | isopropylmalate isomerase large subunit leuD 966898 - 967545 + | isopropylmalate isomerase small subunit leuB 968362 - 969435 + | 3-isopropylmalate dehydrogenase TERM 776 969472 - 969500 + T 90 -18.3 -3.02324 | overlap 969469 GTCGTGGCTGTACCG GTGGCTATCGTTC TTC GGACGATAGCCAC TCTCGTTTGGCTGAC TERM 777 969747 - 969692 - T 84 -8.3 -4.45399 | gap 2, opp_overlap 969701, overlap 969708 ACACCAACACCAAAA CGGCTAGCAGCCAAAACGGCCAGCAGA TCAC TCTGCCGGCCGTCA-GGCTTCCATC-G TGTAGCGAATGACCA TERM 778 969733 - 969708 - T 100 -16.9 -4.21194 | opp_overlap 969701, overlap 969692 GGCTAGCAGCCAAAA CGGCCAGCAGA TCAC TCTGCCGGCCG TCAGGCTTCCATCGT leuA 971328 - 969766 - | 2-isopropylmalate synthase ilvM 972783 - 972526 - | acetolactate synthase isozyme II small subunit ilvG 974488 - 972767 - | acetolactate synthase 2 catalytic subunit TERM 779 973488 - 973452 - G 71 -7.3 -4.08216 | gap 2, overlap 973454 TCACGGTTGGCAAAA CAGCGCGTGCGCCAGCC CTGGC AGTTGGC-C-CGCGCTG CGCTCAGCGCCTTGA TERM 780 974434 - 974481 + g 71 -12.6 -3.17319 | gap 1, overlap 974432 CTTCGGCTTCCAGGG CCTGCGTCAGCCAGCGCGCGCCG TTG CGGGGCGTGCTGTGTG-CGGAGG TGTTCATGCGTTGCG TERM 781 974525 - 974541 + r 83 -15.1 -3.23853 | overlap 974524 AGCGGTGGGGGAGGC GGCGGCG TTA CGCCGCC TGTTGATTCGCAGGC ilvC 975533 - 974532 - | ketol-acid reductoisomerase TERM 782 975618 - 975579 - H 81 -10.1 -4.20516 | gap 2, overlap 975580 975583 TGGGCAGTGAATAAA CG-GATCAGCCGG-CAGTG CAGA CACTGACCGGCTGAACACA GCGGGGACGAACGAT TERM 783 975616 - 975580 - H 70 -11.6 -3.11988 | gap 1, overlap 975579 975583 GGGCAGTGAATAAAC GGATCAGCCGG-CAGTG CAGA CACTGACCGGCTGAACA CAGCGGGGACGAACG TERM 784 975613 - 975583 - H 81 -16.3 -2.76539 | gap 1, overlap 975580 975579 CAGTGAATAAACGGA TCAGCCGG-CAGTG CAGA CACTGACCGGCTGA ACACAGCGGGGACGA TERM 785 975778 - 975755 - H 90 -15.2 -3.71649 | opp_overlap 975755 CCCTGAAACGCGAAA CCCCGCGCCG TTGC CGGTGCGGGG TCTGATCGAAGCCTT TERM 786 975755 - 975778 + H 84 -17.4 -2.78715 | opp_overlap 975755 CCCTGAAACGCGAAA CCCCGCGCCG TTGC CGGTGCGGGG TCTGATCGAAGCCTT TERM 787 976213 - 976182 - H 73 -11.4 -3.66288 | GAGCGGCTAACACAA CGACTGCGCTCACC GCCA GGCGGGCGCGGCCG GTGCTCGGTGCGGCA TERM 788 976756 - 976702 - H 71 -12.9 -3.05596 | gap 1, overlap 976751 TACCGGCGTAGGGAA GCTTCGTCAGATGC-GATGACCCGTG CGTG CACGGGTCATCGGTATCGAACGCCGC CGCTTCGTCCGCACT TERM 789 978145 - 978157 + G 79 -10.5 -4.09685 | GCAGCTGCGCGAATG CGGCG AGG CGCCG TTTTACACCCTGGGG thiC 976967 - 978688 + | thiamine biosynthesis protein ThiC TERM 790 978763 - 978794 + F 95 -20.2 -3.17075 | TTGGTGTGGGGCAGA TCGCATCGCGGCGC ACAC GTGCCGCGGTGCGA TTGGATTGCAAGCGA TERM 791 978878 - 978861 - f 100 -12.7 -5.71712 | opp_overlap 978876 TCGCAGATAAAAAAA TCGCGCC AGAA GGCGCGA AGGATACGTCGTAAT TERM 792 980071 - 980128 + G 71 -14.2 -2.73875 | gap 3 GCGGCACGCGAAGTG GTGCG-GTGCGACCGTGCGGACATGCTGA GTT TCAGC-TGGTCGC-CGGACGCGCGCGCGC TGCTGTTCGGCAGCA XOO0948 979063 - 981465 + | hypothetical protein XOO0949 981531 - 982469 + | transcriptional regulator TERM 793 984114 - 984161 + G 90 -15.6 -3.54129 | gap 1, opp_overlap 984104, overlap 984110 AGCAAGCAGTGGACC GCCAACCTCACCGG-CGGCCTGT TCG ATTTGCCGGCCGGTGAGCTTGGC TTTGCAGCAGGTGTC btuB 982515 - 985484 + | TonB-dependent receptor TERM 794 985507 - 985540 + T 100 -16.9 -4.2461 | opp_overlap 985515, overlap 985515 AGTGGCGTAAATGCG TAGAAAAAGCGGGCC GAAA GGCCCGCTTTTTTTG TTTGTTACTGGCCGT TERM 795 985532 - 985515 - T 100 -14.1 -4.86033 | opp_overlap 985515 985507 AAATGCGTAGAAAAA GCGGGCC GAAA GGCCCGC TTTTTTTGTTTGTTA TERM 796 985515 - 985532 + T 100 -14.1 -6.08342 | opp_overlap 985515, overlap 985507 AAATGCGTAGAAAAA GCGGGCC GAAA GGCCCGC TTTTTTTGTTTGTTA TERM 797 985674 - 985705 + T 100 -13.6 -4.63932 | opp_overlap 985638 GCCGATTCCGAGCGC CGACCGCGCCCGCC TGGC GGTGAGCGCAGTCG TTTTGTTAGCCGCTC TERM 798 986067 - 986037 - T 81 -13.4 -3.66178 | opp_overlap 986043, overlap 986043 CGGCTGAACGCCAAA GAAAAAGACGCGAT GTC ATCGCGCCTTTTGC TACCTCAATCGCCGC TERM 799 986061 - 986043 - T 100 -11 -5.29846 | opp_overlap 986043, overlap 986037 AACGCCAAAGAAAAA GACGCGAT GTC ATCGCGCC TTTTGCTACCTCAAT TERM 800 986043 - 986061 + T 79 -8.8 -4.28548 | opp_overlap 986037 986043 AACGCCAAAGAAAAA GACGCGAT GTC ATCGCGCC TTTTGCTACCTCAAT XOO0951 987247 - 986099 - | response regulator ppa 987897 - 987361 - | inorganic pyrophosphatase XOO0953 987974 - 988576 + | hypothetical protein XOO0955 990760 - 990185 - | H+ translocating pyrophosphate synthase TERM 801 990320 - 990337 + g 71 -9.8 -3.73775 | opp_overlap 990319 990318 CTTGCCGACAAGATC GGCGCG CACATC CGCGCC TTTGGTGAAAATACC TERM 802 990924 - 990939 + G 74 -4.6 -4.55697 | GGCGTTGGAGATCTC GCGCTG GCCA CAGGGC TTTGTTTGTCCGCGT TERM 803 991657 - 991673 + G 74 -10.1 -3.70902 | opp_overlap 991652, overlap 991658 CTGGCAGAGACGATG TGGCGGT TCA ACCGCCG TTTCGATCTGACCCG XOO0956 990772 - 991788 + | transposase XOO0957 992123 - 991785 - | H+ translocating pyrophosphate synthase TERM 804 992376 - 992392 + G 75 -12.3 -3.5393 | TCCCGGAAGCCTGCG CACGCCT TGA AGGCGTG TTTACAGGAAATGCT XOO0958 992210 - 992734 + | hypothetical protein XOO0959 993012 - 992878 - | transposase TERM 805 993009 - 992993 - G 74 -10.1 -3.70902 | opp_overlap 992988, overlap 992994 CGGGTCAGATCGAAA CGGCGGT TGA ACCGCCA CATCGTCTCTGCCAG XOO0960 993894 - 993061 - | transposase TERM 806 993742 - 993727 - G 74 -4.6 -4.55697 | ACGCGGACAAACAAA GCCCTG TGGC CAGCGC GAGATCTCCAACGCC XOO0961 994264 - 993926 - | putative ISXo8 transposase pfkA 995671 - 994415 - | 6-phosphofructokinase adk 995831 - 996394 + | adenylate kinase TERM 807 996429 - 996454 + F 74 -14 -2.87622 | gap 1, overlap 996434 ACGTCCCGGTTGTTG GCGGTCGCGGC GTCTG GCCGCG-CCGC GTTCTTGTAGGGATC TERM 808 996434 - 996455 + F 76 -10.8 -3.79906 | overlap 996429 CCGGTTGTTGGCGGT CGCGGCGT CTGGCC GCGCCGCG TTCTTGTAGGGATCG TERM 809 996523 - 996499 - f 100 -17.2 -5.0916 | overlap 996478 TGCCCAACAGAAAAA CCCCGGACGT ACAAG ACGTCCGGGG CAGAACAACGCCAGT mpl 996761 - 998119 + | UDP-N-acetylmuramate-L-alanine ligase XOO0965 998116 - 998715 + | hypothetical protein TERM 810 999460 - 999446 - g 71 -4.2 -4.57569 | opp_overlap 999455 GGAGCGTCTGAAAAA TACGCC GCT GCCGTA CCAATACCGCTTTTA XOO0966 998862 - 999746 + | hypothetical protein TERM 811 1000000 - 1000033 + T 86 -13.7 -3.90586 | TGCCGATTCCGAGCA CCGGCCGCGCCCGCC TGGC GGTGAGCGCAGTCGG TTTATCAGCTGCTCT XOO0968 1001164 - 1000502 - | putative transposase XOO0969 1001501 - 1001130 - | putative transposase gst 1001728 - 1002342 + | glutathione S-transferase TERM 812 1002379 - 1002397 + T 100 -17.4 -4.25104 | opp_overlap 1002379 AACGCGCAAAAAAAA CGCCGGGC AAT GCCCGGCG TTTTCATGACAGCAG TERM 813 1002397 - 1002379 - T 100 -17.4 -5.77853 | opp_overlap 1002379 AACGCGCAAAAAAAA CGCCGGGC AAT GCCCGGCG TTTTCATGACAGCAG mdh 1003411 - 1002425 - | malate dehydrogenase TERM 814 1003446 - 1003479 + r 71 -10.9 -3.53012 | AAGCGTTGGTGGGGG GCGCGCTGGCGGG GTGCACGG CCTGGCGGCGCGC TTTGACACGCGAACG ppiB 1004021 - 1003527 - | peptidyl-prolyl cis-trans isomerase TERM 815 1003751 - 1003794 + g 89 -15.3 -3.7918 | gap 1, opp_overlap 1003772, overlap 1003781 CGTTGGTGTTCGGGC CGGCGTTGGCCATGGACAGC ACGCC GC-GCTCGTGGCCGACGCCG TTGTTGGTCTCGTCT TERM 816 1004437 - 1004418 - g 78 -7.8 -4.33105 | CAACGATCAGGAAAA GGAACGTG GCAT CACGATCC TGGCCAAGAACACCG typA 1004266 - 1006095 + | GTP-binding elongation factor protein XOO0974 1006165 - 1006584 + | hypothetical protein gatAX 1006807 - 1007244 + | Glu-tRNAGln amidotransferase A subunit XOO0976 1008634 - 1007507 - | membrane protein TERM 817 1007580 - 1007593 + g 78 -3.8 -4.72272 | GCGATCGGCTCGGCA GCAC GCGACG GTGC TTTTTCCTGCGCGGC dhs1 1010117 - 1008735 - | family II 2-keto-3-deoxy-D-arabino-heptulosonate 7-phosphate synthase cirA 1010365 - 1012488 + | colicin I receptor TERM 818 1012535 - 1012504 - T 76 -15.2 -2.52464 | overlap 1012509 TTGCGGCGCAAGGCA GCAGATGGATCGGA TGTA TCCGGTCCATCCGC TGGCATGCCTACGAT dsbB 1013542 - 1013018 - | disulfide bond formation protein B XOO0980 1013706 - 1014194 + | IS1478 transposase TERM 819 1014822 - 1014799 - g 75 -4.5 -4.59773 | gap 1, opp_overlap 1014798 CCGCACGCGTAAAAA GGTGC-CGCT AGGCG AGCGTGCGCC GTTGCTGCGGCCCAC XOO0981 1014359 - 1015345 + | IS1404 transposase XOO0984 1015863 - 1017104 + | transposase XOO0985 1017101 - 1017691 + | IS1478 transposase XOO0986 1018869 - 1017718 - | hypothetical protein TERM 820 1018200 - 1018210 + g 72 -6.8 -4.26076 | overlap 1018197 ACGGATTGCAGATGG CAGC GCC GCTG TTTTGATGAGCCTGG XOO0987 1019587 - 1019093 - | IS1404 transposase TERM 821 1019146 - 1019163 + g 78 -4 -4.79949 | overlap 1019141 1019147 GCTGGGCATAGGCCG CCGGCG TCATTC CGCCGA TTGTTTTTTTGGGGC TERM 822 1019618 - 1019641 + r 73 -3.1 -4.7254 | gap 1 GTGGGCCGCAGCAAC GGTGCACGCT CGCCT ACCG-GCACC TTTTTAGTCGCCCCT XOO0988 1019874 - 1019668 - | IS1478 transposase XOO0989 1021010 - 1020045 - | transposase TERM 823 1020176 - 1020160 - G 74 -10.1 -3.70902 | opp_overlap 1020155, overlap 1020161 CGGGTCAGATCGAAA CGGCGGT TGA ACCGCCA CATCGTCTCTGCCAG TERM 824 1020909 - 1020894 - G 74 -4.6 -4.55697 | ATGCGGACAAACAAA GCCCTG TGGC CAGCGC GAGATCTCCAACGCC tnpA 1021090 - 1021539 + | transposase XOO4735 1022375 - 1022028 - | IS1478 transposase XOO0992 1023641 - 1022406 - | transposase XOO4736 1026669 - 1026406 - | IS1404 transposase XOO4737 1026846 - 1026709 - | hypothetical protein TERM 825 1027592 - 1027566 - R 72 -7.3 -4.18494 | gap 1, overlap 1027567 TACTTGGATTCAAAA CGCCCCTCGAAG TCTT CTCCGAGGAG-G TCCTCAACAGCGTTG XOO1002 1028384 - 1027764 - | pseudouridylate synthase TERM 826 1028786 - 1028801 + G 74 -4.6 -4.55697 | GGTGTTGGAGATCTC GCGCTG GCCA CAGGGC TTTGTTTGTCCGCGT TERM 827 1029519 - 1029535 + G 74 -10.1 -3.70902 | opp_overlap 1029514, overlap 1029520 CTGGCAGAGACGATG TGGCGGT TCA ACCGCCG TTTCGATCTGACCCG XOO1003 1028697 - 1029650 + | transposase TERM 828 1030801 - 1030776 - g 71 -10.3 -3.61398 | overlap 1030788 1030790 CGTGGTGCGCAACAA CACCGCAGCCA ATAG CGGCGGCGGCG CCACCCTGTGGGCGT XOO1004 1029952 - 1031529 + | hypothetical protein TERM 829 1031537 - 1031568 + T 100 -20.2 -3.6608 | opp_overlap 1031529, overlap 1031538 TCAAGTAGGTCGAAC TGCGCGTCCTCGTC GTCT GGCGAGGACGCGCG TTTGGGTGGCATGGT TERM 830 1031538 - 1031567 + T 100 -21.5 -2.79327 | opp_overlap 1031529, overlap 1031537 CAAGTAGGTCGAACT GCGCGTCCTCGTC GTCT GGCGAGGACGCGC GTTTGGGTGGCATGG XOO1006 1032387 - 1031941 - | transposase XOO1007 1032418 - 1033416 + | ISxac1 transposase XOO1008 1033417 - 1033650 + | ISxac1 transposase XOO1009 1033655 - 1034896 + | putative ISXo8 transposase XOO1011 1035192 - 1035040 - | putative transposase TERM 831 1035309 - 1035298 - R 74 -2.2 -4.8622 | overlap 1035299 GGCGGCAATGAAAAA TGCA GCCT CGCA GCTCTAGCAACTCGT XOO1014 1036776 - 1036273 - | hypothetical protein TERM 832 1037180 - 1037202 + r 86 -16.3 -3.2327 | GCGTGCGATGGTCGT TGCGCCCCC CGAGT GGGGGCGCA TTGGTGATGCGTTCG glpQ 1037525 - 1037283 - | glycerophosphodiester phosphodiesterase XOO1016 1037848 - 1037519 - | transposase XOO1017 1038310 - 1037864 - | transposase glpQ 1039053 - 1038316 - | glycerophosphodiester phosphodiesterase TERM 833 1038647 - 1038690 + g 78 -13.9 -3.29829 | AGCGCCTGGGCGAAC GTCGGCGGATGC-CAAGCGGT GACC GCCGCTTGCGCG-CCGCCGCC TTCTGCGCGGATATG XOO1020 1040016 - 1040897 + | putative ISXo8 transposase XOO1021 1040867 - 1041223 + | putative transposase XOO1022 1041189 - 1041620 + | putative transposase XOO1023 1042637 - 1041621 - | transposase TERM 834 1041752 - 1041736 - G 74 -10.1 -3.70902 | opp_overlap 1041735 1041731, overlap 1041737 CGGGTCAGATCGAAA CGGCGGT TGA ACCGCCA CATTGTCTCTGCCAG TERM 835 1042485 - 1042470 - G 74 -4.6 -4.55697 | ACGCGGACAAACAAA GCCCTG TGGC CAGCGC GAGATCTCCAACGCC icd 1042850 - 1043857 + | isocitrate dehydrogenase TERM 836 1043908 - 1043883 - T 76 -7.5 -4.32177 | opp_overlap 1043888, overlap 1043888 TGATCGCACAATAAA GATAAGGGCGC CTAG GCGCCCTTTTG CTTTTGCTTGGGATT TERM 837 1043903 - 1043888 - T 83 -11.8 -4.00122 | opp_overlap 1043888, overlap 1043883 GCACAATAAAGATAA GGGCGC CTAG GCGCCC TTTTGCTTTTGCTTG TERM 838 1043888 - 1043903 + T 100 -11.8 -4.72729 | opp_overlap 1043888 1043883 GCACAATAAAGATAA GGGCGC CTAG GCGCCC TTTTGCTTTTGCTTG XOO1025 1044762 - 1044001 - | hypothetical protein TERM 839 1045301 - 1045285 - H 100 -10.9 -5.2189 | GCAACGACGAAAAAA CGCACAT ACA ATGTGCG ACCAGTTTCAGGGCC TERM 840 1045395 - 1045422 + H 100 -14.2 -4.99638 | opp_overlap 1045395 GCCCACCAATTAAAA CAGCCACTTAGC GCGA GCCAAGTGGCTG TTTTTCTGTGCATCT TERM 841 1045422 - 1045395 - H 100 -16.4 -4.45544 | opp_overlap 1045395 GCCCACCAATTAAAA CAGCCACTTAGC GCGA GCCAAGTGGCTG TTTTTCTGTGCATCT XOO4738 1045635 - 1045898 + | IS1404 transposase XOO1028 1046193 - 1046426 + | IS1404 transposase XOO1029 1046396 - 1046740 + | IS1404 transposase XOO1030 1046884 - 1047093 + | DNA replication protein XOO1031 1047164 - 1047472 + | IS1478 transposase TERM 842 1047513 - 1047531 + F 77 -3.8 -4.90296 | ACGACGAAGGTTCGC TCTGTCAG AAA CTAACGGA TTTTTCTCAAATTTT TERM 843 1048715 - 1048703 - g 72 -3.3 -4.6635 | AAAGGGCGAAGAAAA GACCC TGA GCGTC GATTTCCCGGCCGAG tig 1047894 - 1049375 + | trigger factor clpP 1049468 - 1050094 + | ATP-dependent Clp protease proteolytic subunit TERM 844 1050135 - 1050123 - f 78 -4.7 -4.75404 | opp_overlap 1050121 1050125 1050127 1050129, overlap 1050112 1050124 1050125 AAATTGCAGGAAAAA CCGGC AGG GTCGG GCGGGGCGAATGTCC TERM 845 1050127 - 1050161 + F 81 -16.5 -2.80252 | gap 1, opp_overlap 1050112 1050123 1050124 1050125, overlap 1050125 1050121 1050129 TGCAGGAAAAACCGG CAGGGTCGGGCGGGGC GAAT GTCCT-CCCGACCCTG TGCTATTCTCGAAAT TERM 846 1050129 - 1050159 + F 70 -13.3 -2.94726 | gap 1, opp_overlap 1050123 1050124 1050125, overlap 1050127 1050125 1050121 CAGGAAAAACCGGCA GGGTCGGGCGGGGC GAAT GTCCT-CCCGACCC TGTGCTATTCTCGAA TERM 847 1050816 - 1050781 - g 80 -11.9 -3.78022 | overlap 1050809 TCTATATCGACGAAA TCGACAAGATCTCGC GCAAGA GCGAGAACCCGTCGA TCACCCGCGACGTGT clpX 1050219 - 1051505 + | ATP-dependent protease ATP-binding subunit TERM 848 1051580 - 1051608 + G 100 -21.8 -5.63517 | opp_overlap 1051576 CACTTGCAACACCTC GCCGATGGCCCC ATAAC GGGGCCATCGGC TTTTTTATTTCCCCA lon 1051568 - 1054120 + | ATP-dependent serine proteinase La TERM 849 1054183 - 1054147 - f 78 -10.3 -4.07885 | opp_overlap 1054150, overlap 1054150 TAGGCTCTCGCAAAA CAAGCCAAAACCC GCGTCGTTATT GGGTTTCGGCTTG CGTGCAGTTGGGGGC TERM 850 1054463 - 1054447 - g 91 -10.1 -4.68424 | opp_overlap 1054447 CAAGGCACTGAAAAA GGGCGAC GCC GTCACCC TCGTTGGCTTCGGTA hupB 1054169 - 1054606 + | histone-like protein TERM 851 1054806 - 1054833 + F 95 -12.8 -4.37092 | opp_overlap 1054810, overlap 1054810 TCCGCCAGTTATACG CAAAGCCCCTGA GCAA TTGGGGGCTTTG TTTTCTCCGCAGCAT TERM 852 1054810 - 1054829 + F 86 -7.8 -4.77173 | opp_overlap 1054810, overlap 1054806 CCAGTTATACGCAAA GCCCCTGA GCAA TTGGGGGC TTTGTTTTCTCCGCA TERM 853 1055002 - 1054980 - f 81 -11.9 -3.84825 | opp_overlap 1054980 GCCAGTTATACGAAA GCCCTCGGC CTGGT GCCGGGGGC TTTTTTGGTTCCTGA TERM 854 1054980 - 1055002 + F 100 -14.1 -5.30155 | opp_overlap 1054980 GCCAGTTATACGAAA GCCCTCGGC CTGGT GCCGGGGGC TTTTTTGGTTCCTGA TERM 855 1056294 - 1056277 - g 79 -4 -4.92757 | CTATGAAGAAGAAAA GGCACG CTTTGT CGAGCC GGACCAGCGCCTTGC ppiD 1055381 - 1057408 + | peptidyl-prolyl cis-trans isomerase TERM 856 1057426 - 1057465 + T 83 -13 -3.96148 | opp_overlap 1057432 1057438, overlap 1057432 1057438 CCGAATGATCGATTG GTGAAACAAAAAGCCCGG GTAA CCGGGCTTTTTGTTTGGG TTTCTGGTGGAAAAA TERM 857 1057459 - 1057432 - T 100 -18.6 -3.55761 | opp_overlap 1057426 1057432 1057438, overlap 1057438 GATCGATTGGTGAAA CAAAAAGCCCGG GTAA CCGGGCTTTTTG TTTGGGTTTCTGGTG TERM 858 1057432 - 1057459 + T 100 -18.6 -3.90286 | opp_overlap 1057432 1057438, overlap 1057426 1057438 GATCGATTGGTGAAA CAAAAAGCCCGG GTAA CCGGGCTTTTTG TTTGGGTTTCTGGTG TERM 859 1057453 - 1057438 - T 100 -11.8 -5.27335 | opp_overlap 1057432 1057426 1057438, overlap 1057432 TTGGTGAAACAAAAA GCCCGG GTAA CCGGGC TTTTTGTTTGGGTTT TERM 860 1057438 - 1057453 + T 100 -11.8 -5.34381 | opp_overlap 1057438 1057432, overlap 1057432 1057426 TTGGTGAAACAAAAA GCCCGG GTAA CCGGGC TTTTTGTTTGGGTTT dniR 1059305 - 1058121 - | murein hydrolase D TERM 861 1058592 - 1058627 + g 70 -2.5 -4.62302 | overlap 1058566 1058563 1058610 1058621 CAGGTTGCCCTGCTG CTGCGCGTGATTG AGTACGCAGG CGAGCGCGTGCAG TTTTTCCACGTATTC gloB 1060063 - 1059296 - | hydroxyacylglutathione hydrolase XOO1040 1060076 - 1060732 + | hypothetical protein rnhA 1060760 - 1061212 + | ribonuclease H dnaQ 1061221 - 1061955 + | DNA polymerase III subunit epsilon XOO1044 1062890 - 1062444 - | transposase XOO1045 1063911 - 1063207 - | protein phosphatase TERM 862 1064206 - 1064235 + H 93 -7.3 -5.20333 | gap 1, opp_overlap 1064212 1064213, overlap 1064213 CTCCGCCAAATGACG CAAAAATCCCCG CATAAAA CGGGG-TTTTTG TTTTTATTCTCCGTA TERM 863 1064230 - 1064212 - H 75 -3.7 -4.72386 | opp_overlap 1064206 1064213, overlap 1064213 CAAATGACGCAAAAA TCCCCGC ATAAA ACGGGGT TTTTGTTTTTATTCT TERM 864 1064213 - 1064229 + H 100 -6.5 -5.74684 | opp_overlap 1064212 1064213, overlap 1064206 AAATGACGCAAAAAT CCCCG CATAAAA CGGGG TTTTTGTTTTTATTC XOO1046 1065884 - 1066159 + | site-specific DNA methylase XOO4739 1066288 - 1066458 + | hypothetical protein TERM 865 1066515 - 1066488 - f 79 -14.1 -3.4178 | opp_overlap 1066489, overlap 1066489 AGCAGCTCAGGACAA CGCAGGGCGGC CGCAAT GCCGCCCTGCT TGCGTGTGGGCCAAC TERM 866 1066514 - 1066489 - f 83 -17.6 -2.64747 | opp_overlap 1066489, overlap 1066488 GCAGCTCAGGACAAC GCAGGGCGGC CGCAAT GCCGCCCTGC TTGCGTGTGGGCCAA TERM 867 1066489 - 1066514 + F 89 -17.6 -3.12351 | opp_overlap 1066489 1066488 GCAGCTCAGGACAAC GCAGGGCGGC CGCAAT GCCGCCCTGC TTGCGTGTGGGCCAA TERM 868 1066719 - 1066709 - f 71 -4.6 -4.45201 | GGGCAGAAAAAAAGA GACC TTC GGCC TGCCAGCAACGCATC TERM 869 1069451 - 1069482 + GF 81 -13 -3.59979 | opp_overlap 1069450 1069439 CCAGCCCTACAGCAT CACCTTGGACGACG GCCG CGTCGTGCAAGGCG TTTCCGATGCCAACG XOO1047 1066854 - 1069577 + | Vgr-related protein TERM 870 1069574 - 1069556 - gf 93 -17.4 -3.31461 | CATCGAGGTCCACAA GCCGCCGC TGG GCGGCGGC TGACACTCCTCCCGC TERM 871 1070949 - 1070898 - gf 73 -12.9 -3.15544 | GCGGATGTGGACCAA GCTGCTGCGCGGCGGCAAGCC GGTTGCCGTG GGCCTGCCGCCGCGGCACATC CCGCTGCGCATGGAG XOO1048 1069519 - 1071795 + | hypothetical protein TERM 872 1072475 - 1072489 + G 72 -7.2 -4.20516 | TGCCCAGGCAACCCT CGAAAA GCT TTTTCG TTTCTTCGATGAGCA XOO1049 1071792 - 1073486 + | hypothetical protein TERM 873 1075365 - 1075335 - g 70 -11 -3.40403 | overlap 1075338 1075340 CGTGCGCCAGTACAA GAGCAGCACGCCGC TGC GCGGCACGCCGACC CGTGCCGGCAAGGAT XOO1050 1073806 - 1076010 + | hypothetical protein TERM 874 1076687 - 1076701 + G 72 -7.2 -4.20516 | TGCCCAGGCAACCCT CGAAAA GCT TTTTCG TTTCTTCGATGAGCA XOO1051 1076007 - 1077701 + | hypothetical protein XOO1052 1078023 - 1078580 + | hypothetical protein TERM 875 1078768 - 1078783 + G 74 -4.6 -4.55697 | GGCGTTGGAGATCTC GCGCTG GCCA CAGGGC TTTGTTTGTCCGCGT TERM 876 1079501 - 1079517 + G 74 -10.1 -3.70902 | opp_overlap 1079496, overlap 1079502 CTGGCAGAGACGATG TGGCGGT TCA ACCGCCG TTTCGATCTGACCCG XOO1053 1078682 - 1079632 + | transposase XOO1054 1080486 - 1079731 - | integrase TERM 877 1080040 - 1080027 - G 72 -3.1 -4.63932 | CATTCGGGAACAAAA GCTTC CGCG AAAGC CTGGGCTTGACGATT TERM 878 1080911 - 1080899 - g 85 -7.7 -4.64676 | CTATGTGGAAGAAAA GTCCT ATC AGGAC TATCGCGCCACCGGC XOO1055 1080528 - 1080932 + | hypothetical protein opsX 1082192 - 1081143 - | saccharide biosynthesis regulatory protein TERM 879 1082241 - 1082276 + G 100 -20.6 -3.65812 | gap 1, opp_overlap 1082237 ATGCCACCGAAGCGT TGGCGCCGTA-CCGCGA AGG TCGCGGGTATGGCGCCA TTGTGTTCGACCGCG XOO1057 1082213 - 1082962 + | 3-deoxy-D-manno-octulosonic-acid kinase XOO1058 1082962 - 1083711 + | hypothetical protein moaA 1083711 - 1084742 + | molybdenum cofactor biosynthesis protein A XOO1060 1084760 - 1085119 + | hypothetical protein moaC 1085120 - 1085641 + | molybdenum cofactor biosynthesis protein C moaD 1085638 - 1085883 + | molybdopterin-converting factor chain 1 moaE 1085880 - 1086326 + | molybdopterin-converting factor chain 2 TERM 880 1086993 - 1087007 + G 70 -11.4 -3.36273 | opp_overlap 1086954 GCGCTCGACAGTGGG CGCGTG CAT CACGCG TTCCTGTTCACCGGC TERM 881 1087998 - 1088026 + G 70 -11 -3.31144 | gap 1 GGCTCGGACGACGGA CGCGGCACCACGG CGGG CGGTGGTGC-GCG TTCTGCCGCTGCCGG TERM 882 1088653 - 1088678 + G 79 -11.1 -3.93695 | gap 1, opp_overlap 1088649 GCTTGAATGGACCGT CGCGGCAGCTGG CCG CCAAC-GCCGCG TTTATCGGTCATCGC dnaX 1086888 - 1088984 + | DNA polymerase III subunits gamma and tau XOO1065 1088991 - 1089311 + | hypothetical protein recR 1089409 - 1090002 + | recombination protein RecR XOO1067 1089999 - 1090454 + | histidine triad protein homolog (HIT-like protein) TERM 883 1090521 - 1090541 + T 100 -14 -4.59773 | opp_overlap 1090521 GCGCACATACAAAAA CGCCGCTC CCTGC GAGCGGCG TTTTTGCGAATAACA TERM 884 1090541 - 1090521 - T 100 -14 -5.03994 | opp_overlap 1090521 GCGCACATACAAAAA CGCCGCTC CCTGC GAGCGGCG TTTTTGCGAATAACA slp 1091107 - 1090574 - | outer membrane protein Slp XOO1069 1093056 - 1091104 - | hypothetical protein TERM 885 1091573 - 1091531 - G 72 -12.8 -3.05816 | gap 1, opp_overlap 1091530 1091529 1091561 1091561 CCACGGCGTAGCCAA TCGCCGACCT-GGCCAATG CTGGCC CATGCGCCGAGGTCGGCGA AGTTGTTGCCGCCTT XOO1070 1094005 - 1093049 - | hypothetical protein moxR 1095051 - 1094011 - | methanol dehydrogenase regulator XOO1072 1094991 - 1096871 + | hypothetical protein def 1098264 - 1098902 + | peptide deformylase celS 1099419 - 1100177 + | cellulase S TERM 886 1100248 - 1100286 + F 76 -11 -3.72893 | gap 1, opp_overlap 1100234, overlap 1100249 1100278 GCGCAGCCGCAGCTG TGGTGTGCGGGCC-GCC ATTACC GGTTGGCCCGCACACGG TTTCGTCGGGGCCTG XOO1077 1100605 - 1101396 + | cellulase S TERM 887 1101646 - 1101666 + T 86 -7.6 -4.78572 | CCTGCATCCTGGGCA TGACATGC GAATG GCGTGTCA TTTTATTGATTCAGC TERM 888 1101681 - 1101728 + T 79 -16.4 -2.52464 | opp_overlap 1101685, overlap 1101685 ATTTTATTGATTCAG CCAAGTGCCATGTATTGCGCGT CATC AAGCGCGGTGCATGGCACTTGA TGACTTGGGGCCGAC TERM 889 1101685 - 1101724 + T 83 -15.8 -3.21912 | opp_overlap 1101685, overlap 1101681 TATTGATTCAGCCAA GTGCCATGTATTGCGCGT CATC AAGCGCGGTGCATGGCAC TTGATGACTTGGGGC TERM 890 1101882 - 1101913 + T 75 -4.2 -4.69053 | GCCGATTCCGAGCAC CGGCCGTGCCCGCC TGGC GGTGAGTGCAGTCG TTTTGTTAGCTGCTC rhgB 1103716 - 1102013 - | rhamnogalacturonase B TERM 891 1103143 - 1103132 - G 79 -2.2 -5.06816 | opp_overlap 1103121 ATCCGGCAACAAAAA GACA TCGT TGCC TTCGATCGCTGTGCC XOO1079 1104160 - 1103975 - | hypothetical protein XOO1080 1104301 - 1104170 - | hypothetical protein XOO1084 1106556 - 1105876 - | hypothetical protein TERM 892 1106203 - 1106223 + g 79 -11.1 -3.87815 | opp_overlap 1106196 CCAGATCACGTCCAG CGGGTCGGC GTC GCTGATCCG TTTGTCACAATGCAG XOO1085 1107098 - 1106667 - | putative transposase TERM 893 1106936 - 1106925 - G 76 -2.2 -4.8622 | overlap 1106926 GGCGGCAATGAAAAA TGCA GCCT CGCA GCTCTGCAACTCGTC XOO1086 1107641 - 1107111 - | putative transposase XOO1087 1108124 - 1107693 - | hypothetical protein TERM 894 1107750 - 1107785 + g 75 -9.1 -3.94868 | gap 2 GGCCCAGTCCAATCC TCCATTGCC--CGCGCC CAGT GGCGGGATGGCAATGGA TTTGACTTTGTTCTC XOO1088 1108430 - 1109605 + | putative ISXo8 transposase XOO1089 1109574 - 1109861 + | putative ISXo8 transposase TERM 895 1110521 - 1110483 - T 81 -10.3 -4.11692 | gap 1, overlap 1110487 TAGCTACGGTGAAAA CGA-AGGAACGGACGCTC TGTG GAGCGCCCGTTCCAGTCC CGTGCTGGTAACTCA TERM 896 1110516 - 1110487 - T 100 -20.1 -3.67622 | overlap 1110483 TACGGTGAAAACGAA GGAACGGACGCTC TGTG GAGCGCCCGTTCC AGTCCCGTGCTGGTA XOO1090 1111498 - 1110572 - | glutaredoxin-like protein TERM 897 1111408 - 1111398 - G 84 -8.2 -4.56597 | opp_overlap 1111407 GCCTTGGCCGAAAAA CCGC ACT GCGG CATGCCGGGCTGGCC nodB 1111559 - 1112335 + | acetylxylan esterase XOO1092 1113332 - 1112637 - | hypothetical protein XOO1093 1114272 - 1113631 - | hypothetical protein aspC 1115540 - 1114269 - | aminotransferase AlaT TERM 898 1115498 - 1115520 + g 79 -10.5 -4.07885 | opp_overlap 1115500 AGCGGACTTCGGACA GACGCTCGC GGATG GCGAGCGGC TTTTGCGGGGCAGTG TERM 899 1115807 - 1115840 + G 71 -13.1 -2.94218 | gap 1, opp_overlap 1115781 GCATCCGCAGGCGCT GCCGGCGCGGGTGGTG GAG CAGCA-CCGCACCGGC TATGTGGTGGCCGAT XOO1095 1115694 - 1116785 + | ribosome-associated GTPase TERM 900 1117277 - 1117306 + G 81 -3.6 -5.00616 | gap 1 TCGGCGACGGCCCTA CGCATGCAG-TTG CAGAA CGACCTGGATGCG TTTTTTGAAGGGCGC XOO1096 1116785 - 1118047 + | hypothetical protein nonF 1118119 - 1118880 + | NonF-related protein TERM 901 1118966 - 1118932 - T 78 -14.9 -3.07816 | opp_overlap 1118932 CCGTTAGGGAGCCAA GCCCGGCACGCGCGC TACTT GCGCGCCTGCCGGAG TAGGTACCGGGGCTG XOO1098 1121065 - 1119047 - | amylosucrase or alpha amylase TERM 902 1120990 - 1120970 - GT 78 -10.3 -3.96148 | opp_overlap 1120982, overlap 1120971 GGTGCTCATTAGAAA CCGCCGGGC AGG ACCCGGCGC GGGGTCCTTAAAAGT TERM 903 1120989 - 1120971 - GT 75 -13.8 -2.97475 | opp_overlap 1120982, overlap 1120970 GTGCTCATTAGAAAC CGCCGGGC AGG ACCCGGCG CGGGGTCCTTAAAAG fyuA 1123304 - 1120998 - | TonB-dependent receptor TERM 904 1123636 - 1123620 - g 70 -2.1 -4.70659 | overlap 1123621 1123622 TTGGAGATCGAAAAA GTGCTGC GGC GCAGCGT TACAATCGATTGCAA TERM 905 1123749 - 1123768 + G 79 -5.7 -4.70659 | gap 1, overlap 1123751 TTTCTTTCGCACGCA TCCTGGCG CTCAA CGCC-GGA TTTTTCGGTGTGCAA TERM 906 1124266 - 1124284 + G 76 -5.9 -4.4767 | overlap 1124262 CGTCACCATCGCCGC GTTCGCG ATCGG CGCGGGC TTTTCTGCTGCATCG TERM 907 1124386 - 1124352 - g 85 -16.4 -2.94099 | TCCCGCCAGCACAGA TCGCACGCCTGCGCCA GAC CGGCGCAGGCCTGGGA GCCACCGTGCGCGAA suc1 1123565 - 1125043 + | sugar transporter TERM 908 1125071 - 1125045 - T 76 -10 -3.86524 | overlap 1125049 AGAGCCGCTCATAAA GCGACTGCGCGG CCG CCAGGCAGGCGC AGCCAGTGCTCGCTG TERM 909 1125115 - 1125144 + T 78 -6.3 -4.63932 | gap 1, overlap 1125118 GCGTACACCGCGGTT CGT-GCGCGCCGTC CAG GGCTGCCCGCTACG TTTTGTTGGCCACTC cebR 1126504 - 1125284 - | transcriptional regulator fabG 1127362 - 1126556 - | 3-ketoacyl-(acyl-carrier-protein) reductase citM 1128736 - 1127408 - | Mg++/citrate complex transporter TERM 910 1128204 - 1128175 - G 84 -14.3 -3.67112 | AGGACAGCGCAAGAA TGCCGGCAATGGC CAGC ACCATGGCCGGCA CCAACGGCACAAACA oprO 1130205 - 1128964 - | porin O tctD 1130221 - 1131114 + | two-component system regulatory protein tctE 1131050 - 1132492 + | two-component system sensor protein TERM 911 1132951 - 1132970 + F 71 -12.8 -3.01712 | opp_overlap 1132918, overlap 1132929 CCGCGTGCCGCGCAC GCGCCGGC AATT GCTGGCGC TGTTGCGCGCCCCCG TERM 912 1133860 - 1133889 + G 73 -9.2 -3.90588 | gap 1 TCATCCGCGCGTGAT CCGGCGTGCGCAG CAGTT CGGCGCG-GCCGG TTTCATTCCCAAATC XOO1109 1133582 - 1134220 + | LuxR/UhpA family transcriptional regulator XOO4740 1134734 - 1134351 - | hypothetical protein XOO1110 1135275 - 1134421 - | hypothetical protein mocA 1136090 - 1135272 - | rhizopine catabolism protein mocA XOO4741 1137027 - 1136800 - | hypothetical protein ybhD 1136219 - 1137121 + | transcriptional regulator XOO1113 1137892 - 1137113 - | hypothetical protein cit1 1139328 - 1137889 - | citrate carrier protein XOO1115 1142199 - 1139554 - | sensor histidine kinase TERM 913 1140043 - 1140022 - G 71 -7.3 -4.18494 | CACGGTCACCGAAAA CACGCTG CCACTGCC CAGCGTG GAACGCAGACCGATG TERM 914 1141147 - 1141161 + g 74 -11.4 -3.65201 | overlap 1141157 AGTGACCACGCCGTC CTGCGC GGT GCGCAG TTCTTCGGCGTGTTG TERM 915 1141311 - 1141257 - G 71 -12.8 -3.03203 | gap 3, opp_overlap 1141278 1141280 1141287, overlap 1141249 1141252 1141260 GCACGAACAACCACA GCACGGCCAGCGCCAGC-CATGCGCCG GCGG CGGCGATTGCGGCGGCGC-GGCCG-GC AGCGGCACTGACGCG TERM 916 1141309 - 1141260 - G 71 -14.2 -2.73221 | opp_overlap 1141278 1141280 1141287, overlap 1141249 1141252 1141257 CGAACAACCACAGCA CGGCCAGCGCCAGC-CATGCGCCG GCGG CGGCGATTGCGGCGGCGC-GGCCG GCAGCGGCACTGACG TERM 917 1142066 - 1142098 + g 77 -4.9 -4.63218 | gap 2, overlap 1142065 TAGAGCCGCAGCTGG CG-GC-GCACGGTGG CACTT TCATCGTGCAGCGCG TTTTGTTCGACGAAG TERM 918 1142451 - 1142414 - R 100 -22.2 -3.57561 | gap 1, overlap 1142420 1142439 GGGCAAGCGCCCAAA CGACAACGGCCGCATCC GTGAA GGATGCGGCCGT-GTCG AACGCCTAGTGCGGT TERM 919 1142446 - 1142420 - R 100 -19.5 -3.60151 | overlap 1142414 1142439 GCGCCCAAACGACAA CGGCCGCATCC GTGAA GGATGCGGCCG TGTCGAACGCCTAGT oprO 1143792 - 1142521 - | polyphosphate-selective porin O TERM 920 1143447 - 1143463 + g 70 -7.9 -4.00445 | opp_overlap 1143447, overlap 1143448 AATCGTAGGACACCA TGGCGTC GTA GACGCCC TTCTTCTTGATGGTG dctA 1143933 - 1145357 + | C4-dicarboxylate transporter DctA TERM 921 1145367 - 1145409 + F 100 -22 -4.19238 | CGTTGATGCTTCCTG CGGCCCTGTCTTCCGTCGGT ATT GCCGGCGGGATGCAGGGCCG TTTTCGCGTTGAGCC TERM 922 1146604 - 1146583 - g 71 -10.2 -3.59233 | overlap 1146579 1146586 CAATGAGGAAATGAA GATCGCCT GCGTCA AGGCGATC GCCGCGATGGCGCGG maeB 1145555 - 1147864 + | malic enzyme TERM 923 1149172 - 1149149 - g 75 -4.5 -4.66833 | gap 1, opp_overlap 1149148 CCGCAAGCGTAAAAA GGTGC-CGCT AGGCG AGCGTGCGCC GTTGCTGCGGCCCAC XOO1119 1148709 - 1149695 + | IS1404 transposase XOO1121 1149875 - 1150843 + | hypothetical protein XOO4742 1151034 - 1150795 - | putative transposase thiE 1151796 - 1151125 - | thiamine-phosphate pyrophosphorylase rubA 1151772 - 1152011 + | rubredoxin TERM 924 1152058 - 1152085 + Tr 83 -15.6 -3.17075 | TGTTCTAGGTAGCAG CAGTCAGTGCGC CCGC GCGCGCTGGCTG TTCAATTCCACCAAG XOO1125 1152942 - 1152061 - | hypothetical protein XOO1126 1153574 - 1153092 - | hypothetical protein rpiA 1154339 - 1153692 - | ribose-5-phosphate isomerase A XOO1128 1154901 - 1154431 - | hypothetical protein XOO1129 1155518 - 1154898 - | hypothetical protein TERM 925 1155811 - 1155786 - R 100 -15.5 -5.03994 | opp_overlap 1155783 1155790 TTGGACACACAAAAA GAAACGACGCC CGAA GGCGCCGTTTC AGATTTGCATTCTCC XOO1130 1156396 - 1156097 - | hypothetical protein XOO1131 1156662 - 1156393 - | hypothetical protein TERM 926 1156665 - 1156627 - G 71 -13.8 -2.78596 | CATGCGCTCACGATA GGCGCGCGCGCGCG GGGTGGTCAAG CGCGCGCGCACGTC TCGATCGCTGGCGCC TERM 927 1156805 - 1156822 + H 84 -2.6 -5.29445 | AGAAGTCATATCGCC GGTCCC TGAATC GGCACC TTTTTGTTCTTCAGC TERM 928 1156913 - 1156882 - g 72 -8.6 -4.08064 | opp_overlap 1156909, overlap 1156887 AACCGCTGTGCAAAA CGAAAGCCGTCAGC TGGC GCTGGCGTCCTCCG CGGCGGAGTTGCATG XOO1132 1156826 - 1157392 + | hypothetical protein pepP 1157403 - 1158743 + | aminopeptidase P TERM 929 1158878 - 1158909 + T 77 -14.4 -2.93073 | overlap 1158875 1158908 CTCACGCCGCGCTTT GCCTGGCACATCGT CGAT ACGACGCGCCAGGC TACTTGTTGCAAGCC TERM 930 1159031 - 1159046 + T 73 -6.8 -4.34402 | overlap 1159025 1159023 TGTTCTTCCGGCGTG CCGAGC GCCT GTTCGG TTTTCATGTGCGCGC XOO1136 1160241 - 1159795 - | transposase TERM 931 1159858 - 1159889 + g 100 -2.9 -5.86061 | overlap 1159857 TTTTGGTGTTCCATC CGCCCCGCGATTT CCCGAT GGATTGTGGGCCG TTTTTTTTAATGCGC pepQ 1161772 - 1160447 - | proline dipeptidase XOO1138 1162318 - 1161971 - | hypothetical protein TERM 932 1162078 - 1162043 - G 82 -15.5 -3.1637 | gap 2 AGACATGGTCAGGAA GCGCACGCCAGCCCAGG ACTG CCCGGGC-G-CGTGCGC GGCCTCGGACCACAG XOO1139 1164723 - 1162315 - | hypothetical protein TERM 933 1163396 - 1163417 + g 70 -13.7 -2.53343 | overlap 1163395 1163411 TTGGCTAGCAATGCC TGCGCCGGC GTCT GCTGGCGCA CTTCGTGCTGCATCT XOO1140 1166059 - 1164902 - | coproporphyrinogen III oxidase XOO1141 1166674 - 1166075 - | putative deoxyribonucleotide triphosphate pyrophosphatase TERM 934 1166343 - 1166324 - G 88 -10.6 -4.40804 | overlap 1166308 GATCACCGCATAAAA CCGTGCGC TGCG GCGCTCGG CCGGAACGCCGCGCA XOO1142 1167066 - 1166671 - | hypothetical protein rph 1167788 - 1167063 - | ribonuclease PH TERM 935 1168083 - 1168068 - g 79 -2.5 -5.0133 | CATTGCGGCAAAAAA CAGCC GCGGCA AGCTG GATCTGACGCTGCGC XOO1144 1167898 - 1168758 + | hypothetical protein TERM 936 1168886 - 1168876 - g 81 -3.2 -5.02074 | CTATTCCCTAAAAAA TGCG CGG CACA CTCTATATCGTTGCG TERM 937 1169400 - 1169377 - g 70 -7.4 -3.97042 | overlap 1169372 1169378 TGATCATCAACGAAA CCTTCGACAC CGCG GTGTCGGAGA TGTGCGCCATCTTCA gmk 1168875 - 1169486 + | guanylate kinase XOO1146 1169652 - 1170023 + | putative transposase XOO1147 1169989 - 1170465 + | putative transposase TERM 938 1170748 - 1170732 - g 72 -8.7 -4.18018 | GCCGCTGATCGAAAA TGCCGCT GCC AGCGACA AGCCCACCGTGATGG rpoZ 1170580 - 1170912 + | DNA-directed RNA polymerase subunit omega TERM 939 1170941 - 1170962 + F 100 -13 -4.54727 | opp_overlap 1170941 TGCGATCGACCCAAA CAGCCCGC CTAGAC GCGGGCTG TTTTCGTTTCGGGCC TERM 940 1170962 - 1170941 - f 77 -13 -3.6682 | opp_overlap 1170941 TGCGATCGACCCAAA CAGCCCGC CTAGAC GCGGGCTG TTTTCGTTTCGGGCC TERM 941 1172409 - 1172387 - g 82 -5.6 -4.82901 | gap 1, overlap 1172388 1172389 1172408 GCGCGTGGATAAAAA GC-TGGTGC CGTTGC GCACCAAGC TGGTCAGCGGCCAGG spoT 1171041 - 1173212 + | pentaphosphate guanosine-3'-pyrophosphohydrolase yjgF 1173292 - 1173672 + | translation initiation inhibitor TERM 942 1175156 - 1175180 + G 76 -13.6 -3.12327 | gap 1, opp_overlap 1175149, overlap 1175154 CGAACGGATCCGCGC CGCCTG-CGCC GAGG GGCGTCAGGCG TATTGGGTATGCACG TERM 943 1175375 - 1175361 - g 76 -5.7 -4.58685 | opp_overlap 1175360, overlap 1175349 1175366 AAACCGGCCGAAAAA CAGCA GGCCA TGCTG GATTTCAAGCAGGGT recG 1173693 - 1175846 + | ATP-dependent DNA helicase XOO1152 1175972 - 1176910 + | inosine-uridine preferring nucleoside hydrolase rpmE2 1176982 - 1177224 + | 50S ribosomal protein L31 type B TERM 944 1177248 - 1177274 + F 100 -23.8 -5.76949 | GACGGGCTGTACCGG CAACGGCCGCGC ATT GCGCGGCCGTTG TTTTTTTTGGGCGTC gltA 1177399 - 1178727 + | type II citrate synthase TERM 945 1178773 - 1178755 - T 72 -11.6 -3.34522 | opp_overlap 1178755 AGATGCTTGAACGAA CGCTCCGC ATT GCGGGGCG TTTGCATGTGCGATG TERM 946 1178755 - 1178773 + T 84 -13.8 -3.71378 | opp_overlap 1178755 AGATGCTTGAACGAA CGCTCCGC ATT GCGGGGCG TTTGCATGTGCGATG XOO1155 1179523 - 1179104 - | hypothetical protein TERM 947 1179168 - 1179188 + g 77 -9 -4.26076 | TGTCGCACTTGGGCG GCCGATGC ACGCG GCATTGGC TTTTCATCCAGCTGC TERM 948 1179400 - 1179365 - G 79 -11 -3.85698 | opp_overlap 1179389 GTGCTCTTCCAGAAA CCGCTGCACGGCATCG GCAT CGTCGCTGTGCAGCTG CAACTGCACCGGTGC TERM 949 1180053 - 1180016 - R 100 -16.5 -5.00616 | gap 1 TCGGCGGCCAAAAAA TTGGGGAACCG-AACAGC CGC GCCGTTCCGATTCCCCAA TCCCGGCGCCTCAGA mrcA 1182493 - 1180064 - | penicillin-binding protein 1A TERM 950 1180496 - 1180514 + g 72 -11 -3.51976 | overlap 1180492 GGCGGTGCGCTCGTC GATTGCGC GAG GCGCGATC TTGGTTTCGGCAATT TERM 951 1180976 - 1180935 - G 79 -11.5 -3.84825 | gap 1 CGCACCGATACCAAA TTGCGCGATTGCACCAGCGC CTC GCGCAGGCGC-ATCGGGCCA CGGAAGCCACCGCCG TERM 952 1181183 - 1181201 + g 74 -11.6 -3.65046 | opp_overlap 1181174 1181169 ACTGAAGCCGCCGAC CAGCGCGC GCA GCGCGCCG TTGTTGGCGTCCAGC TERM 953 1181326 - 1181361 + g 77 -15.5 -2.57335 | gap 1, overlap 1181322 1181316 1181318 GCAGCTTGGCCGGGG TCTTGCCGGTCCAGCG GCTGG CGCTGG-CCGGCAGGG TCAGTTCGGTCTTGT pilM 1182649 - 1183767 + | fimbrial assembly membrane protein TERM 954 1184030 - 1184001 - g 79 -7.1 -4.51812 | CTCGACAAGAAGAAA GACCGCCTGCTTG CCCG CAAGAAGGTGATC GAGGAATTGCAGGCC TERM 955 1184414 - 1184360 - g 100 -17.6 -4.84359 | overlap 1184361 CGAGGCTGACAAAAA CGGCACCGCGCCGGGCACCGCAGCAC CGG GTGCAGCGCCTGCCGGCGCGACGCCT GCTGCTCCGGCAGCG TERM 956 1184413 - 1184361 - g 100 -21.1 -3.50133 | overlap 1184360 GAGGCTGACAAAAAC GGCACCGCGCCGGGCACCGCAGCAC CGG GTGCAGCGCCTGCCGGCGCGACGCC TGCTGCTCCGGCAGC pilN 1183767 - 1184525 + | fimbrial assembly membrane protein pilO 1184522 - 1185187 + | fimbrial assembly membrane protein pilP 1185184 - 1185717 + | fimbrial assembly protein TERM 957 1186817 - 1186798 - gT 72 -3.4 -4.61231 | opp_overlap 1186798, overlap 1186800 CGATATTCCGAAAAA GGTCGCGC AGAT GCGTGAAC TGATTTCGCATATCG pilQ 1185665 - 1187686 + | fimbrial assembly protein TERM 958 1187703 - 1187734 + T 71 -13.8 -2.57931 | opp_overlap 1187704 1187709, overlap 1187709 TCTTGACTGGTTTAA AGAAAAGAGGTCGC GAAG GCGGCCTCTTTTCC ATTGTGGCGCATGAG TERM 959 1187733 - 1187704 - T 86 -15.1 -3.54424 | opp_overlap 1187703 1187709, overlap 1187709 CTTGACTGGTTTAAA GAAAAGAGGTCGC GAAG GCGGCCTCTTTTC CATTGTGGCGCATGA TERM 960 1187728 - 1187709 - T 100 -9.2 -4.86731 | opp_overlap 1187703 1187709, overlap 1187704 CTGGTTTAAAGAAAA GAGGTCGC GAAG GCGGCCTC TTTTCCATTGTGGCG TERM 961 1187709 - 1187728 + T 89 -11.4 -4.3208 | opp_overlap 1187709 1187704, overlap 1187703 CTGGTTTAAAGAAAA GAGGTCGC GAAG GCGGCCTC TTTTCCATTGTGGCG XOO1162 1188233 - 1187757 - | putative transposase XOO1164 1188698 - 1189933 + | transposase XOO1165 1190564 - 1190004 - | putative transposase XOO4743 1191018 - 1190530 - | putative transposase TERM 962 1191239 - 1191224 - H 74 -4.6 -4.55697 | ACGCGGACAAACAAA GCCCTG TGGC CAGCGC GAGATCTCCAACGCC TERM 963 1192313 - 1192300 - g 71 -8.1 -4.10657 | CGATACGCTGGAAAA GCACG AGAC CGTGC CCGACAAGATTCCGT moxR 1191662 - 1192681 + | methanol dehydrogenase regulatory protein XOO1168 1192702 - 1193664 + | hypothetical protein XOO1169 1193667 - 1194128 + | hypothetical protein XOO1170 1194125 - 1195132 + | hypothetical protein TERM 964 1195804 - 1195776 - g 71 -13.7 -2.71712 | overlap 1195775 TCGTTCCGCTGAAAG TGCCGCGCGTACG GCG CGCTCGCGCGGCT TCACCGTTTCTGCGC XOO1171 1195123 - 1196946 + | hypothetical protein XOO1174 1197221 - 1198702 + | hypothetical protein TERM 965 1200118 - 1200094 - g 72 -6.4 -4.2558 | gap 1, opp_overlap 1200116 GACTGCCGATGAAAA GGTCGCCACGC TGCG GCGTGG-GATC GAAGGCGTCTTCGAG gltP 1199369 - 1200793 + | proton glutamate symport protein TERM 966 1201027 - 1201046 + G 72 -3.4 -4.63218 | overlap 1201031 CAGCCCACCCGTCGC CAGCTGGC CAAC GCCATCCG TTTTCTTGCCGCAGA TERM 967 1201814 - 1201786 - g 70 -10.9 -3.34192 | overlap 1201773 AAGGCCGGCAAGGAA TCCTCGCACGGCG CGC CGCTGGGCAAGGA CGAACTGGAAGGCGC tktA 1201006 - 1203006 + | transketolase TERM 968 1203055 - 1203028 - f 76 -12.8 -3.53012 | opp_overlap 1203034, overlap 1203034 GCGTGGTGCTTGAAA GAAAAAGCCGGC GAAA GCCGGCTTTTTT GTTGGATCTCGTGTG TERM 969 1203049 - 1203034 - f 100 -11.8 -5.27335 | opp_overlap 1203034, overlap 1203028 TGCTTGAAAGAAAAA GCCGGC GAAA GCCGGC TTTTTTGTTGGATCT TERM 970 1203034 - 1203049 + F 100 -11.8 -5.49234 | opp_overlap 1203034 1203028 TGCTTGAAAGAAAAA GCCGGC GAAA GCCGGC TTTTTTGTTGGATCT TERM 971 1203623 - 1203650 + G 100 -7.8 -5.38047 | opp_overlap 1203629 GTGATTGGCATAGGG CACAGACATCTT GCGA GAGATGTGTGTG TTTTTTGTGTGCCTG fhuE 1203104 - 1203811 + | outer membrane receptor for ferric iron uptake XOO1178 1204541 - 1203825 - | hypothetical protein TERM 972 1204333 - 1204355 + g 71 -14.2 -2.7535 | overlap 1204310 1204330 TTGGTTGGCGCCGCG TCGGTTGCTG GCG CGGCAACCGA TGGTGTCTTCGCAGG XOO1179 1205536 - 1204544 - | hypothetical protein TERM 973 1205571 - 1205584 + r 84 -8.1 -4.42653 | opp_overlap 1205553 1205551, overlap 1205550 ATGCGCGCACCTTGC CGCAG CCGC CTGCG TTTTCTGCGTGAAAT TERM 974 1205840 - 1205796 - R 83 -15.8 -3.1247 | gap 1, opp_overlap 1205797 ATGGCGCACACGTAA CCGCTGCAGCGGCG-TATTGC ATCT GCAAGATCACCGCTGCAGCGT GCCTGCCGCTCTCGA cirA 1208570 - 1205856 - | TonB-dependent receptor TERM 975 1206683 - 1206664 - G 72 -11.4 -3.53012 | gap 1, overlap 1206665 GCCGGGCGGCTGAAA CTGCGCCGC AAT GCGGCGC-G ATATACGGTGAGATC TERM 976 1207581 - 1207601 + g 91 -14.7 -3.94188 | opp_overlap 1207581 1207578, overlap 1207582 GTGCGTATTGAAGTA TCCACCGCG CAC CGCGGTGGG TTGTTTGCGATAAGT TERM 977 1207582 - 1207600 + g 81 -16 -2.96031 | opp_overlap 1207581 1207578, overlap 1207581 TGCGTATTGAAGTAT CCACCGCG CAC CGCGGTGG GTTGTTTGCGATAAG XOO1181 1209865 - 1208690 - | hypothetical protein TERM 978 1209774 - 1209784 + g 84 -6.8 -4.75309 | opp_overlap 1209770 1209755, overlap 1209759 GCGAAGAAAATGGCG GTGC GCG GCAC TTTTCTTCGCTTTGC TERM 979 1209801 - 1209813 + g 75 -3.4 -4.7629 | TTTCTTCGCTTTGCG CGAA TCAAC TTCG TTTTTCGATTGATGC TERM 980 1209894 - 1209882 - R 71 -9.1 -3.69354 | CGGCACAACCGGAAA GCGAC GAG GTCGC CATCATCGCGGTGCA XOO1182 1212066 - 1210000 - | hypothetical protein TERM 981 1210291 - 1210280 - G 72 -7.2 -4.25104 | opp_overlap 1210280 1210285 CCGTCGCGACGAAAA GGCG CCAG CGCC TGTTCCAGTGCCTGT TERM 982 1212649 - 1212679 + G 80 -4.7 -4.72272 | gap 2, opp_overlap 1212641, overlap 1212648 CACGCAACCGCAAGT GGTATG--CGGCGAC GTC GCCGCCGGGCATGCC TTTTTGCTGGAGCGG XOO1183 1212086 - 1212823 + | hypothetical protein XOO1184 1212851 - 1214260 + | long-chain acyl-CoA synthetase (AMP-forming) XOO1185 1214257 - 1214805 + | hypothetical protein XOO4744 1214685 - 1214933 + | carbamoylphosphate synthase large subunit (split gene in MJ) XOO1186 1214933 - 1215772 + | short chain dehydrogenase pflu4968 1216038 - 1216415 + | TPR repeat-containing protein XOO1188 1216387 - 1217136 + | response regulator TERM 983 1217552 - 1217570 + G 71 -13.8 -2.73364 | GCGCACATTTACCTT GCGCTCGC CGG GCGGGCGC TGGTTCCAATCGGCC XOO1189 1217133 - 1218515 + | Signal transduction histidine kinase TERM 984 1218610 - 1218599 - g 78 -3 -4.91712 | TGTAATCGATAAAAA TTAC GGAT GTAA TCGCATGTCGATCAG blaI 1218561 - 1218980 + | BlaI family transcriptional regulator TERM 985 1220024 - 1220075 + GF 73 -10.9 -3.55563 | gap 3, opp_overlap 1220006 1219994, overlap 1220022 CCATCGTGCGCAGCA CGCCGGCGGGCGTGTT-CGATCGGGC CGT GCTCGA-CGCGGCACGC-CACTGGCG TTTCGCACCTGCGCT XOO1191 1218970 - 1220304 + | TonB-like protein XOO1192 1220277 - 1220885 + | hypothetical protein TERM 986 1221209 - 1221190 - T 91 -3.5 -5.40474 | ATCGGTCGAAAAAAA CAGCGCT TGCGAC AGCCCTG CAGGTGCCCCCATCG modC 1221881 - 1221228 - | ATP-binding component of molybdate transport modB 1222534 - 1221842 - | molybdate ABC transporter permease protein TERM 987 1222171 - 1222124 - GR 79 -6.2 -4.59773 | overlap 1222127 GGTGATGCTGAAAAA CACCCGCCA-CGGCCCGGCGCC CAGCGT GGCGGC-GGCCGCTTCCAGGTG CCGGTCGGTGGCCTC TERM 988 1222472 - 1222416 - GR 100 -20.8 -2.52896 | gap 2, overlap 1222444 TTACCCGGGAAGCGA CGCCGCGC-CAGCAGCCAGCCG-CAGGC AAT GCCCGGCGGCAGGCTGGCGAGCGCCGCG ACGATTGCGACCTTG TERM 989 1222588 - 1222564 - R 82 -5.5 -4.8622 | overlap 1222536 1222537 1222580 TCCTTCAACGAAAAA CCATGGCGCGC GAA GATCGCCCTGG CCGACTTGCTGCCCA modA 1223354 - 1222545 - | molybdate-binding periplasmic protein; permease TERM 990 1223153 - 1223171 + g 84 -6.7 -4.72272 | gap 1, opp_overlap 1223148 1223150, overlap 1223145 1223156 CTGCATACGACACCC GC-ACCGG TGTG CCGGTTGC TTTTTCGTAGGCAGC XOO1196 1224222 - 1223392 - | beta-lactamase TERM 991 1223690 - 1223671 - G 78 -10 -3.9693 | gap 1 GATCGAGGCAAACAA CTGGC-GCG CAT CGCCGCCAG GGAAATCGCAGCGCG XOO1197 1225222 - 1224236 - | endonuclease TERM 992 1225237 - 1225268 + GH 90 -15.8 -3.66288 | overlap 1225252 1225253 TGCCGCACCGAGCAC CGGCCGCGCTCGCC TGGC GGTGAGCGCAGTCG TTGTGTTAGCCGCTC XOO1198 1225214 - 1226308 + | putative ISXo8 transposase XOO1199 1226450 - 1226746 + | putative ISXo8 transposase omp21 1227246 - 1226743 - | outer membrane protein ompW 1228178 - 1227471 - | outer membrane protein W gapA 1228874 - 1229881 + | glyceraldehyde-3-phosphate dehydrogenase TERM 993 1229929 - 1229898 - f 76 -13.2 -3.53444 | opp_overlap 1229900 1229907, overlap 1229900 1229907 CGATGTGTGGTTAAA CATAAAAAAGCGCC TTTC GGCGCTTTTTTATT TCCGCATTTACCAAT TERM 994 1229927 - 1229900 - f 84 -15.8 -3.34517 | opp_overlap 1229900 1229907, overlap 1229898 1229907 ATGTGTGGTTAAACA TAAAAAAGCGCC TTTC GGCGCTTTTTTA TTTCCGCATTTACCA TERM 995 1229900 - 1229927 + F 86 -15.8 -3.63968 | opp_overlap 1229900 1229898 1229907, overlap 1229907 ATGTGTGGTTAAACA TAAAAAAGCGCC TTTC GGCGCTTTTTTA TTTCCGCATTTACCA TERM 996 1229920 - 1229907 - f 100 -9.5 -5.56264 | opp_overlap 1229900 1229907, overlap 1229900 1229898 GTTAAACATAAAAAA GCGCC TTTC GGCGC TTTTTTATTTCCGCA TERM 997 1229907 - 1229920 + F 100 -9.5 -5.63517 | opp_overlap 1229907 1229900 1229898, overlap 1229900 GTTAAACATAAAAAA GCGCC TTTC GGCGC TTTTTTATTTCCGCA XOO1204 1230242 - 1230688 + | transposase TERM 998 1231223 - 1231238 + G 74 -4.6 -4.55697 | GGCGTTGGAGATCTC GCGCTG GCCA CAGGGC TTTGTTTGTCCGCGT TERM 999 1231956 - 1231972 + G 74 -10.1 -3.70902 | opp_overlap 1231928 1231951, overlap 1231957 CTGGCAGAGACGATG TGGCGGT TCA ACCGCCG TTTCGATCTGACCCG XOO1206 1231026 - 1232087 + | transposase colS 1233549 - 1232197 - | two-component system sensor protein TERM 1000 1232701 - 1232721 + g 78 -3.9 -4.73388 | overlap 1232704 TTCGGCGCGCTGGAT GCGCTGCAG GCG TTGCAGTAC TTTTTCATCCAGGTT TERM 1001 1233044 - 1233034 - G 72 -3.2 -4.59251 | CGAAAAAAAACCAAA CAGC AGA ACTG AAACGTACAACCAAG TERM 1002 1233628 - 1233601 - R 100 -21.4 -4.10657 | opp_overlap 1233606 TTACACTCCGTAAAA CGATAGCGGCCC ATTT GGGCCGCTATCG TAAACTGAACGACAA TERM 1003 1233606 - 1233623 + r 72 -14.1 -2.79796 | opp_overlap 1233601 CTCCGTAAAACGATA GCGGCCC ATTT GGGCCGC TATCGTAAACTGAAC colR 1234719 - 1233979 - | two-component system regulatory protein XOO1209 1235224 - 1234736 - | hypothetical protein TERM 1004 1235236 - 1235209 - G 100 -21.4 -4.83169 | opp_overlap 1235204 AGCCGTCCATAAAAA GGCCCAAGTGCG ACAT CGCACTTGGGCC AAAAGTTCATCCCGA rimK 1236400 - 1235339 - | ribosomal protein S6 modification protein tnp 1237818 - 1236661 - | transposase XOO1212 1239927 - 1237819 - | hypothetical protein TERM 1005 1238730 - 1238699 - G 89 -13 -4.09243 | TACAGGCGTGCAAAA CCGATCAGCGACAC GATG GCGCCGCTGACCAG GTATGGCCACACGCG XOO1213 1240010 - 1240717 + | serine/threonine protein kinase XOO1214 1240783 - 1241154 + | putative transposase XOO1215 1241120 - 1241596 + | putative transposase XOO4746 1241778 - 1241647 - | hypothetical protein TERM 1006 1242214 - 1242193 - g 82 -7.1 -4.66609 | overlap 1242194 1242195 GATGCGATCGAAAAA GCGCAGGGC CACA GCGCAGCGC GGTAGCACCTGAAGA XOO1216 1241815 - 1242219 + | hypothetical protein TERM 1007 1242385 - 1242419 + G 70 -4.9 -4.37092 | gap 1, opp_overlap 1242385 TGGGGCCACATGGAA CGTGCTGCAGGCAAGC TTGC GCGTGAC-GCAGGACG TTTTATCGAACGCAT XOO1217 1242253 - 1242612 + | hypothetical protein kch 1243728 - 1242856 - | ion transporter argD 1243801 - 1245027 + | bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein XOO1220 1245964 - 1245272 - | hydrolase TERM 1008 1246230 - 1246254 + H 71 -9.1 -3.71848 | overlap 1246232 CCATCCTCACCACCG CCCGCTCGCGC CAC GCGCGGGCGTC TTGTTGCTGGCCGGC TERM 1009 1246232 - 1246252 + H 89 -16.1 -3.44284 | overlap 1246230 ATCCTCACCACCGCC CGCTCGCGC CAC GCGCGGGCG TCTTGTTGCTGGCCG XOO1225 1249038 - 1249463 + | cytochrome C6 tdcF 1249524 - 1249991 + | hypothetical protein TERM 1010 1250055 - 1250066 + F 72 -7.2 -4.17048 | overlap 1250039 CGCCGCACGTTTCTA CGCG ACTG CGCG TTGTTTTCCGGCGCC TERM 1011 1251378 - 1251410 + F 74 -9.8 -3.72576 | CTCAGCAGGTCACTG TTGCAGCGGCGCGC CGCGT GCGAGGTGCTGCAA TTTCCTAACCCAGGA az1 1251509 - 1251883 + | electron transfer protein azurin I TERM 1012 1251951 - 1251994 + TF 73 -13.2 -3.17075 | GCGCTCAACGTGGCG ATGCATGCAGATCAGTCAGT TGCC ACAGCCTGATCTGCATGCGG TTCGCTTCCACGCAA TERM 1013 1252426 - 1252394 - Tf 71 -13.3 -2.98823 | opp_overlap 1252400 CGCGCTGTACAGATA CGGCAGGGCGGCGAG GGG CTCGCCGCGTTGCTG CAGTACCAGCGCAAT TERM 1014 1252400 - 1252420 + TF 73 -12.5 -3.16564 | opp_overlap 1252394 GTACAGATACGGCAG GGCGGCGAG GGG CTCGCCGCG TTGCTGCAGTACCAG TERM 1015 1253107 - 1253132 + TF 78 -14.7 -3.08464 | gap 1 CGCCCAGGTCGCTGC CGC-CGCGCTGC ATC GCGGCGCGCGCG TTGCGTGCGTAGTGC TERM 1016 1253640 - 1253668 + TF 71 -8.8 -3.87641 | gap 1, opp_overlap 1253640 ATGCTCGCCGAACCA GCGTGCTGC-GCG TTGA TGCAGCTGCACGC TTTGTCCGGGATGTT TERM 1017 1254014 - 1254042 + TF 71 -8.8 -3.87641 | gap 1, opp_overlap 1254014 ATGCTCGCCGAACCA GCGTGCTGC-GCG TTGA TGCAGCTGCACGC TTTGTCCGGGATGTT hemL 1257012 - 1255483 - | glutamate-1-semialdehyde aminotransferase TERM 1018 1256997 - 1257014 + Gg 71 -4.1 -4.56969 | gap 1 CAGAGAGTGTGATTC CGGTAGCT ACT GGC-ACCG TTTATTTGTCGCCTT XOO1233 1256977 - 1260237 + | Oar protein TERM 1019 1260265 - 1260292 + Tr 100 -17.8 -5.27335 | ATCAGGCAGTCCCGG CAGCGACGCGTG ATGG CACGCGTTGCTG TTTTTGTTTCGGGGA XOO1234 1261603 - 1260734 - | hypothetical protein TERM 1020 1261191 - 1261213 + g 81 -13.4 -3.66999 | CCATCGCGCACGCCA CGCCGCCG GCGCTTG CGGCGGCG TTTGCGTAGATGCAT XOO1235 1262296 - 1261625 - | transposase XOO1236 1262514 - 1262293 - | hypothetical protein TERM 1021 1262406 - 1262432 + g 73 -14.4 -2.81173 | overlap 1262394 1262394 GCTGCTCGGGCGTCA GCGGCCGGCC TTGTCCC GGCTGGCCGC TCTGCTCGGCTTGGT avrB6 1265906 - 1262688 - | avirulence protein TERM 1022 1262843 - 1262894 + g 81 -11.7 -4.13945 | gap 3 CTGCCAGGTCGGCAG CGATGGGCGTACCAGGATCCGGGAGG CCG CC-CCCG-ATCCTGGTACG-CGGGCG TTTTACCCTCCAGCT TERM 1023 1264792 - 1264751 - G 70 -13.8 -2.62184 | gap 1, opp_overlap 1264748 1264760, overlap 1264760 GGTCCTGGCACAGCA CCGGCAA-CAGGCGCTGCA CCGTC TCCAGCGCCTGCTTGCCGC CAATATTGCTGGCGA TERM 1024 1266185 - 1266170 - R 100 -11.8 -4.67038 | CCCTGAAAACCAAAA CCGGCC CAAG GGCCGG TCAGGTCTACGCGCT XOO4747 1266417 - 1266223 - | hypothetical protein XOO1238 1269067 - 1266686 - | avirulence protein TERM 1025 1266841 - 1266892 + gr 86 -11.7 -4.13945 | gap 3 CTGCCAGGTCGGCAG CGATGGGCGTACCAGGATCCGGGAGG CCG CC-CCCG-ATCCTGGTACG-CGGGCG TTTTACCCTCCAGCT XOO4748 1269149 - 1268490 - | hypothetical protein avrXa3 1270183 - 1269128 - | avirulence protein XOO1240 1270270 - 1270671 + | IS30 family transposase XOO1241 1270717 - 1270881 + | remnant of a transposase gene protein XOO4749 1270878 - 1271216 + | hypothetical protein hemE 1272635 - 1271571 - | uroporphyrinogen decarboxylase XOO4750 1272901 - 1272650 - | hypothetical protein aroB 1274315 - 1273203 - | 3-dehydroquinate synthase TERM 1026 1273572 - 1273583 + g 82 -7.2 -4.62783 | opp_overlap 1273572 GCCCAGGTTGAGCAA GGCG CGCT CGCC TTTTTCCAGTGGATC aroK 1274854 - 1274312 - | shikimate kinase pdxH 1275021 - 1275620 + | pyridoxamine 5'-phosphate oxidase XOO1246 1275681 - 1276217 + | hypothetical protein XOO1247 1276230 - 1277003 + | hypothetical protein XOO1248 1277029 - 1278111 + | potassium channel related protein XOO1249 1278054 - 1278785 + | hypothetical protein XOO1250 1278754 - 1279227 + | hypothetical protein XOO1251 1279240 - 1279812 + | hypothetical protein TERM 1027 1279918 - 1279930 + G 76 -9.1 -4.18018 | opp_overlap 1279918 1279917 GTACTGGGACGAAAG CGCGT ACT ACGCG TTTTCGCTGCGGCAG TERM 1028 1280581 - 1280545 - g 82 -15.8 -3.10975 | ATTCATGATGGAAGA GCGCTTCGGGCCGGCA TTGAT TGCCGACCGGATGCGC CTGATCGAGCCGGCA TERM 1029 1280631 - 1280621 - g 72 -6.8 -4.24342 | GTGTTGAGCAACAAA GGCA TTC TGCC GCTGCTATGGGACCG XOO1252 1279814 - 1280980 + | synthetase/amidase TERM 1030 1281485 - 1281472 - T 93 -2.3 -5.60993 | CGTGCCACAAAAAAA CTCGC CACC GCCAG CAACCACGCCAACGC TERM 1031 1281959 - 1281947 - T 91 -3.3 -5.42259 | overlap 1281957 GCAGCGGCAAAAAAA CGCCT CAA AGCCG AAGAATGCGGAGGCG XOO4751 1282471 - 1282283 - | MFS transporter soxR 1282972 - 1283418 + | SoxR family transcriptional regulator TERM 1032 1284825 - 1284866 + F 71 -5.8 -4.33417 | gap 1, opp_overlap 1284825, overlap 1284825 1284834 TGCCGGCATGGAATA CCC-GGGCATCGTCTTCGA CGGTT TCGAAGACGGCGGCAAGGG TTTGTTCTGGATCAC TERM 1033 1285019 - 1285004 - f 70 -7.5 -4.08767 | overlap 1285013 CGGATGCGTTCAAAA GGGCG AATACG CGCCC AAGCGCGATTCGGAA XOO1259 1285107 - 1285643 + | peptidase TERM 1034 1285697 - 1285659 - f 79 -16.7 -2.52896 | gap 1 GCATTGCGCAAGGCA GCACGCTGACGTGGCCGC AGGC GCGGTCGCGTCAGCG-GC CACCTGCAGTGGCGA TERM 1035 1288561 - 1288549 - g 70 -2.6 -4.63218 | overlap 1288535 1288552 CCGGGTGGAAGAAAA GACC CGCGC GGCC TACGTGCAGTTGGAA fecA 1286663 - 1289848 + | TonB-dependent receptor TERM 1036 1290921 - 1290888 - g 73 -9.6 -3.86897 | gap 1, opp_overlap 1290902 1290920, overlap 1290863 1290891 CTGATGGCCGAGAAA CAGCGCCGCC-TGCA GCAGT CGCACAGCGACGCTG TTGCCGCGTAGGCCT XOO1261 1289985 - 1290932 + | hypothetical protein XOO1262 1290922 - 1291992 + | hypothetical protein prnA 1292033 - 1293550 + | tryptophan halogenase XOO1264 1294592 - 1293588 - | hydrolase XOO1265 1295165 - 1294737 - | hypothetical protein TERM 1037 1295568 - 1295552 - R 71 -5.8 -4.25104 | gap 1, opp_overlap 1295551 GTGTCGGCATCAAAA GCG-GCG GATG CGCGCGC GTTGCATCCCAGCGA TERM 1038 1295650 - 1295614 - R 100 -17.3 -3.75332 | overlap 1295647 ATGGCTGAACCCAAA GCGCCTCGCTCGGCACT GCG ATTGCGGAGCGAAGCGC TATCGAGCGTGGCAG XOO1266 1297095 - 1295698 - | endoproteinase Arg-C XOO1267 1299052 - 1297550 - | amino acid transporter TERM 1039 1299533 - 1299550 + G 81 -12.7 -3.5764 | CCGCTGCATCTGCCC GGTGGCG CGTT CGCCACC TTTAGCGCTGCGATT ahyR 1299056 - 1299889 + | AhyR/AsaR family transcriptional regulator XOO1269 1300203 - 1301144 + | proline imino-peptidase TERM 1040 1301713 - 1301682 - f 83 -7.8 -4.63932 | GAGCGGCTAACAAAA CGACTGCGCTCACC GCCA AGCGGGCGCGGCCG GTGGTCGGAATCGGC TERM 1041 1302771 - 1302809 + G 70 -13.8 -2.62616 | TGGCACGCATTCCCG GTGCCGCCACGGCAATCA CCC TGGTGGCGGTGGTGGCGC TGCTGTCGGCGCTCA gabP 1301900 - 1303288 + | amino acid transporter XOO1272 1304944 - 1303709 - | transposase TERM 1042 1305449 - 1305482 + G 93 -3 -5.24129 | gap 1, overlap 1305451 1305452 TGGAATGGCGCTGGC TGC-GCACGCGTCTG CCAGT CTGGCGCGAGCTGTA TTTTTTCTGGCAGAA TERM 1043 1305679 - 1305704 + G 79 -6.1 -4.65933 | gap 1, overlap 1305683 GTGATGCTGTTCGGC TGGGGGCGCATC TCC GA-GCGCCTGCA TTTCTTTTCCAGCTG XOO1273 1305331 - 1306731 + | quinol oxidase, subunit I TERM 1044 1307475 - 1307513 + G 78 -13.9 -3.21416 | GTGGGGTTCGCGCTG TGGC-GTGCCACCGATGCG GAG CGC-TCGGAGGCGCTGCCA TTCCTGCTGGCGATG qxtB 1306728 - 1307747 + | quinol oxidase subunit II XOO1275 1308605 - 1307808 - | hypothetical protein mgtE 1310117 - 1308756 - | Mg++ transporter ptsI 1312075 - 1310405 - | phosphotransferase system enzyme I TERM 1045 1311349 - 1311383 + g 71 -12.1 -3.23853 | gap 1, overlap 1311348 CGTTGTCGCGCGTGC GCGTGGGCTTGGAGCG CAAC CGCCCCA-GCTCGCGC TGTTCCTTGGCCAAC TERM 1046 1311721 - 1311710 - G 76 -5.8 -4.56597 | GCGCTTGTGCAAAAA CGCA TGGA TGCG GCCGATCACGTGATC ptsH 1312463 - 1312194 - | phosphotransferase system HPr enzyme XOO1279 1312848 - 1312456 - | hypothetical protein XOO1280 1314247 - 1313375 - | hypothetical protein ptsK 1315194 - 1314244 - | HPr kinase/phosphorylase ptsN 1315622 - 1315191 - | nitrogen regulatory IIA protein TERM 1047 1315683 - 1315713 + r 77 -2.5 -5.00611 | gap 1, overlap 1315689 1315692 AGCGTCATGCGGGAT TGTCGCGCACCTCG CGGG CGTGGTG-GTTACA TTTCTTTTCTTTGTG XOO1283 1315989 - 1315672 - | sigma-54 modulation protein rpoN 1317576 - 1316077 - | RNA polymerase factor sigma-54 TERM 1048 1316567 - 1316593 + g 72 -7.2 -4.25104 | overlap 1316568 CGCAGGTAGCCGGCG TCGGATTCGCCG CAG CTGCGAATCAGG TTTTCGTAGCCGCGG yhbG 1318276 - 1317557 - | ABC transporter ATP-binding protein XOO1286 1318824 - 1318276 - | hypothetical protein TERM 1049 1318321 - 1318339 + g 100 -12.4 -4.62783 | TGTCGGGGCGGGCGT TGCGGCGT CAG GCGCCGCA TTTTTCGGCTGGATA TERM 1050 1318366 - 1318385 + g 74 -10.6 -3.76373 | GATAATGGTGCGCAC GCGGCTGC CGTC GCCGCCGC TTTGCATGTTGCCGG XOO1287 1319377 - 1318802 - | hypothetical protein XOO1288 1319928 - 1319374 - | hypothetical protein kpsF 1320972 - 1319971 - | polysialic acid capsule expression protein XOO4752 1321027 - 1321254 + | hypothetical protein murA 1321493 - 1322767 + | UDP-N-acetylglucosamine 1-carboxyvinyltransferase XOO1291 1322764 - 1323087 + | hypothetical protein TERM 1051 1324199 - 1324218 + T 71 -4.9 -4.48987 | overlap 1324194 GCGCCTTGATGGTCA GGTCCAG CGCGTC CTGGCCC TTTTCCTTCTGCAGC XOO1292 1324859 - 1324176 - | hypothetical protein TERM 1052 1324487 - 1324505 + g 70 -13.8 -2.55351 | overlap 1324486 CGGGCTGCAGTTTCA CCGGGCCG CGG CGGTCCGG CTTGATGTCGCCGCC XOO1293 1325690 - 1324863 - | hypothetical protein purN 1326424 - 1325756 - | phosphoribosylglycinamide formyltransferase XOO1295 1327028 - 1326411 - | hypothetical protein XOO1296 1327512 - 1327051 - | hypothetical protein purM 1328584 - 1327526 - | phosphoribosylaminoimidazole synthetase TERM 1053 1328191 - 1328161 - GH 75 -14.6 -2.70932 | TTTCGCCTCCAATCA GCGCGCAGCCGGAC AGC GCGCAGCCGCGCGC GATGCCGCCGACCAC TERM 1054 1328375 - 1328399 + gH 74 -13.5 -2.89447 | overlap 1328372 CTTGGTGCCCACGCC GTCGGTGCCGG AGA CCAGCACCGGC TCCTTGTACTTGCCC XOO1298 1328550 - 1329794 + | hypothetical protein perM 1329791 - 1330957 + | permease XOO1300 1330954 - 1331655 + | hypothetical protein XOO1302 1332532 - 1331822 - | nucleotidyl transferase TERM 1055 1332242 - 1332230 - G 89 -4.7 -5.14163 | overlap 1332231 ATTGACCAACAAAAA TGGCG CAT CGCCC AATAGCGGCAGCGCA XOO1303 1333581 - 1332529 - | hypothetical protein XOO1304 1333959 - 1333606 - | hypothetical protein XOO1305 1334103 - 1334309 + | putative transposase TERM 1056 1335043 - 1335013 - g 71 -11.9 -3.2794 | gap 1 GTGGAGCTACACCAA GCGCA-CGGGCG TAGCGCGC CGCCCGCTGCGC AGTGGCGAGAAGCTG XOO4753 1334309 - 1335160 + | putative transposase TERM 1057 1335364 - 1335332 - T 79 -16.4 -2.53213 | gap 1, overlap 1335341 CAATGCGTCAAGCCA GGCACCCAAGCT-GC GCCA GCGAGCCTGGGTGCC AAAACCAGCTATTCA TERM 1058 1335783 - 1335771 - T 76 -6.2 -4.56597 | CGGCTTGTCGAAAAA CGCC TTGCT GGCG TCGTCGATGGCCTTT dapE 1336974 - 1336183 - | succinyl-diaminopimelate desuccinylase comEA 1337099 - 1337506 + | DNA transport competence protein TERM 1059 1337610 - 1337643 + T 93 -7.3 -4.98531 | opp_overlap 1337599 ACAAGGACGTGGAAT CGCCCGGTGTTGCAT TTGG ATGTGCAGCCGGGCG TTTTTCGTTTGGGCG XOO4754 1339013 - 1338840 - | hypothetical protein XOO4755 1339625 - 1339449 - | hypothetical protein XOO1314 1340707 - 1340147 - | IS1478 transposase TERM 1060 1340919 - 1340934 + G 74 -4.6 -4.55697 | GGCGTTGGAGATCTC GCGCTG GCCA CAGGGC TTTGTTTGTCCGCGT TERM 1061 1341652 - 1341668 + G 74 -10.1 -3.70902 | opp_overlap 1341624 1341647, overlap 1341653 CTGGCAGAGACGATG TGGCGGT TCA ACCGCCG TTTCGATCTGACCCG XOO1315 1340830 - 1341783 + | transposase lamA 1342035 - 1341823 - | endo-1,3-beta-glucanase XOO1317 1343864 - 1342281 - | alpha-L-arabinosidase galM 1343992 - 1345161 + | aldose 1-epimerase XOO1319 1346078 - 1345449 - | hypothetical protein TERM 1062 1346543 - 1346558 + G 74 -4.6 -4.55697 | GGCGTTGGAGATCTC GCGCTG GCCA CAGGGC TTTGTTTGTCCGCGT TERM 1063 1347276 - 1347292 + G 74 -10.1 -3.70902 | opp_overlap 1347271, overlap 1347277 CTGGCAGAGACGATG TGGCGGT TCA ACCGCCG TTTCGATCTGACCCG XOO1320 1346391 - 1347407 + | transposase TERM 1064 1347662 - 1347682 + G 70 -11.1 -3.39844 | overlap 1347648 1347660 GGCGGGCCGCCAGCC GGTGCCGCT ATA ATCGGCACC TGTTTCCCCTCTGCG TERM 1065 1348671 - 1348653 - g 86 -10.2 -4.30576 | overlap 1348663 CGTCGATCAGGAAAA GGCCGCCA AAC TGGCCGCC AAGGTCGCCAAGGGC ffh 1347601 - 1349085 + | signal recognition particle protein TERM 1066 1349413 - 1349391 - g 87 -6.3 -5.02074 | gap 1, overlap 1349374 GCAGTGTCGAAAAAA CCGCACACGA CACG TC-CGTGCGG CAGTGGCGCCGCCAC TERM 1067 1350455 - 1350411 - g 79 -5.6 -4.69053 | gap 1 GAGCAGTTAACAAAA CGACTGCGCTCACC-GCCAGG CGGG CGTGGCCGGTGCTCGGAATCG GCATGTACCACGCGT XOO1322 1349063 - 1350508 + | hypothetical protein TERM 1068 1350897 - 1350939 + GF 100 -13.2 -4.42806 | GTGGATTCCCGACCC GGCGCCCGTGCGCGATGCGG CTG CCGAAGCGCGCCTGCGTGCC TTTCTTTCGCAGTGG XOO1323 1350655 - 1351728 + | 2-nitropropane dioxygenase XOO1324 1351692 - 1352516 + | hypothetical protein TERM 1069 1352720 - 1352684 - g 71 -14.3 -2.66316 | opp_overlap 1352710, overlap 1352681 CGTTCTATCACATCA TCGTGACCGACGTGCGC AGC GCGCGCGACGGTCGCAA CATCGAGCGTCTGGG rpsP 1352626 - 1352883 + | 30S ribosomal protein S16 TERM 1070 1352941 - 1352973 + G 83 -9.2 -4.34402 | gap 2 GATGAAGCAGACCGA GCGCCG-C-ATCCTGT TAG GCAGGGTTGTCGGCGC TTTTGGTGTCAAGGG TERM 1071 1353350 - 1353361 + G 73 -5.8 -4.33258 | overlap 1353344 CGTGGCGATCGCGAG CGGA TGAT TCCG TTTGTGTTTCCGGAT rimM 1352897 - 1353439 + | 16S rRNA-processing protein TERM 1072 1353445 - 1353462 + F 78 -6.9 -4.55128 | opp_overlap 1353445 GGATTTCTGATCAAA GCGGTGC CTCG GCGCTGC TTTTGCTTTACCCAT trmD 1353448 - 1354284 + | tRNA (guanine-N(1)-)-methyltransferase rplS 1354312 - 1354815 + | 50S ribosomal protein L19 TERM 1073 1354845 - 1354875 + T 100 -14.1 -4.60041 | gap 1, opp_overlap 1354816 1354852, overlap 1354846 1354850 CTTGTCCCGCCACTG C-CAGACAGCCGCC TTCG GGCGGCTGTTTGCG TTTTTAAGGATGCAT TERM 1074 1354846 - 1354873 + T 86 -17.8 -2.61004 | opp_overlap 1354816 1354852, overlap 1354845 1354850 TTGTCCCGCCACTGC CAGACAGCCGCC TTCG GGCGGCTGTTTG CGTTTTTAAGGATGC TERM 1075 1354850 - 1354869 + T 93 -15 -3.99805 | opp_overlap 1354852, overlap 1354846 1354845 CCCGCCACTGCCAGA CAGCCGCC TTCG GGCGGCTG TTTGCGTTTTTAAGG XOO1329 1356952 - 1355441 - | hypothetical protein TERM 1076 1356765 - 1356787 + g 81 -7.6 -4.57073 | AACATGATGCTGTTG GCATTGGCCG CCG CGGTCAGCGC TTTTTCGCCCAGATA hslR 1356996 - 1357679 + | heat shock protein 15-like protein TERM 1077 1357751 - 1357720 - f 75 -12.3 -3.60948 | opp_overlap 1357722 1357726, overlap 1357721 1357726 CAATAGACCCGCAAA CGCAAACGCCCCG GTGATT CGGGGCGTTTGTA TTACCTGGCACACGC TERM 1078 1357750 - 1357721 - f 72 -13.6 -2.76087 | opp_overlap 1357722 1357726, overlap 1357720 1357726 AATAGACCCGCAAAC GCAAACGCCCCG GTGATT CGGGGCGTTTGT ATTACCTGGCACACG TERM 1079 1357722 - 1357749 + F 90 -17.8 -3.08679 | opp_overlap 1357721 1357720 1357726, overlap 1357726 ATAGACCCGCAAACG CAAACGCCCCGG TGAT TCGGGGCGTTTG TATTACCTGGCACAC TERM 1080 1357745 - 1357726 - f 81 -12.1 -3.84719 | opp_overlap 1357722 1357726, overlap 1357721 1357720 ACCCGCAAACGCAAA CGCCCCG GTGATT CGGGGCG TTTGTATTACCTGGC TERM 1081 1357726 - 1357745 + F 89 -12.8 -4.21607 | opp_overlap 1357726 1357721 1357720, overlap 1357722 ACCCGCAAACGCAAA CGCCCCGG TGAT TCGGGGCG TTTGTATTACCTGGC XOO1331 1357793 - 1358074 + | putative ISXo8 transposase XOO1332 1358090 - 1359313 + | ISxac1 transposase XOO1333 1359586 - 1360374 + | putative ISXo8 transposase XOO1334 1360361 - 1360645 + | putative ISXo8 transposase XOO1335 1360926 - 1360642 - | glutathione transferase XOO1336 1361252 - 1360947 - | GIY-YIG nuclease superfamily protein TERM 1082 1361470 - 1361426 - H 77 -12.8 -3.64703 | gap 2, overlap 1361427 GCCGTCGTATCGAAA GGCCTGGCGC-CG-CGCGTGGG ACG CTCGCGCGCCATGCGCCAAGCC CTTGGCCACCACGCC TERM 1083 1361462 - 1361427 - H 78 -15.4 -2.78679 | gap 1, overlap 1361426 CCGTCGTATCGAAAG GCCTGGCGC-CGCGCGT GGG ACGCTCGCGCGCCATGC GCCAAGCCCTTGGCC TERM 1084 1362241 - 1362191 - g 72 -11.1 -3.53855 | gap 1, overlap 1362189 1362187 1362194 CGCTGGAAAAATACA CCATCGACCTGACCGCGCGTGCCG AAAG CGGCAAGCTCGATCCGGT-GATCG GCCGCGATGAAGAAA TERM 1085 1362696 - 1362673 - g 82 -5.9 -4.75356 | opp_overlap 1362691, overlap 1362676 AAATACATCGAAAAA GACGCGGCA TTGGAG CGCCGCTTC CAGAAAGTGTTCGTC clpB 1361587 - 1364283 + | ATP-dependent Clp protease subunit TERM 1086 1365298 - 1365283 - g 78 -3.3 -4.93296 | opp_overlap 1365283, overlap 1365297 GGATCAGTACAAAAA GATGT TGCAAG ACATC TATCATGCGCCGCTG XOO1338 1364351 - 1365319 + | hypothetical protein XOO1339 1366139 - 1365594 - | IS1404 transposase TERM 1087 1365647 - 1365664 + g 78 -4 -4.79949 | overlap 1365642 1365648 GCTGGGCATAGGCCG CCGGCG TCATTC CGCCGA TTGTTTTTTTGGGGC XOO1341 1366700 - 1366302 - | IS1404 transposase TERM 1088 1366424 - 1366437 + g 89 -2.3 -5.40072 | overlap 1366400 1366425 CAGCGCACGACGCGC CGGTG CGCT CACCA TTTTTTTGCAGCGCA TERM 1089 1367437 - 1367448 + G 70 -2.2 -4.61231 | CCATGGTGCGTCTGG GACT GAAG GGTC TTTTTGCGCCTATGG XOO1343 1366719 - 1367555 + | IS1478 transposase XOO1344 1367545 - 1368060 + | ISxac3 transposase TERM 1090 1369119 - 1369099 - g 80 -13.9 -3.35679 | GGCTGGCAGCGACAA CGCGCGCCG CTA CGGCGCGGG CGTGGCCGGGCGCAG btuB 1368569 - 1370446 + | outer membrane receptor for transport of vitamin B XOO1346 1371884 - 1370673 - | putative ISXo8 transposase TERM 1091 1372368 - 1372380 + G 79 -5.5 -4.67904 | overlap 1372365 TGGTTTGGCGCTGCG GTGGC ACG GCTAC TTTTTCGCATTGCTG XOO1347 1372219 - 1372812 + | hypothetical protein TERM 1092 1372896 - 1372912 + G 71 -7.9 -4.08767 | GCAGCGGTGATGGTC TGCACGC GTG GCGCGCA TTTTGCGAGCGTGCA TERM 1093 1373151 - 1373189 + G 78 -13.9 -3.24747 | overlap 1373150 GCGCTGCAGTTACGG CGCCATGC-CCGGCGTGGT GTC ACCGCGCCGGTGTG-GGCG TTGCTGATCTGCGGC TERM 1094 1373200 - 1373212 + G 71 -10.5 -3.57651 | GGGCGTTGCTGATCT GCGGC AGC GCCGC TTATCTACTCTCCAA XOO1348 1372842 - 1373411 + | hypothetical protein TERM 1095 1373635 - 1373658 + G 71 -7.4 -4.08945 | GGGCACGTTTTCGAC CGGCGAAGAA GCGT TTTTCCGCCG TTTTCCGGACCTGCT btuR 1373408 - 1374019 + | cob(I)alamin adenolsyltransferase TERM 1096 1374021 - 1374062 + F 75 -12.4 -3.54424 | overlap 1374024 1374025 GCATCGAGCTGTAGC CGTGGCCGAGCGCGC-GCAA CGCG TTGCAGCGCGATCGG-CATG TTTGCCGGCATGCCC TERM 1097 1374024 - 1374060 + F 74 -13 -3.35046 | gap 1, overlap 1374021 1374025 TCGAGCTGTAGCCGT GGCCGAGCGCGC-GCAA CGCG TTGCAGCGCGATCGGCA TGTTTGCCGGCATGC TERM 1098 1374025 - 1374059 + F 80 -16.5 -2.60813 | gap 1, overlap 1374024 1374021 CGAGCTGTAGCCGTG GCCGAGCGCGC-GCAA CGCG TTGCAGCGCGATCGGC ATGTTTGCCGGCATG cobU 1374533 - 1375054 + | adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase cobT 1374991 - 1376097 + | nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase XOO1352 1376094 - 1376684 + | hypothetical protein cobS 1376681 - 1377415 + | cobalamin synthase TERM 1099 1377624 - 1377611 - T 72 -4.5 -4.56597 | CTTCGCTGGCAAAAA CACCA TCTG CGGTG CCGGATGCATCAGAA lysA 1378870 - 1377590 - | diaminopimelate decarboxylase iucA 1380558 - 1378783 - | iron transporter yceE 1381726 - 1380530 - | transport protein XOO1357 1383525 - 1381723 - | hypothetical protein TERM 1100 1382719 - 1382692 - G 76 -14.2 -3.15544 | gap 1 TTGCAGCGGCACCAA CGTGCGCACCGAC AGC GTCGG-GCGCACA TCCAGCCAGGCGTTC XOO1358 1384748 - 1383522 - | hypothetical protein TERM 1101 1384354 - 1384392 + g 70 -7.3 -3.9461 | gap 1, opp_overlap 1384344, overlap 1384351 CAGAACCACGGGCAG GGCAGGCCATGTGCACGC AGGC GCTGGCGCATCGCC-GCC TTGTTCTTGGCGGCA fecA 1387125 - 1384984 - | citrate-dependent iron transporter mphE 1387887 - 1387126 - | 4-hydroxy-2-oxovalerate aldolase TERM 1102 1387319 - 1387298 - G 74 -5.1 -4.56597 | overlap 1387299 1387318 GGGTTGGGGCAAAAA GGTACGTTG GCGG CAACGCACT GCGCATGCAGTTGCA TERM 1103 1388302 - 1388289 - g 79 -2.3 -5.00884 | overlap 1388275 1388290 1388291 ATGCGCTGCAAAAAA TGGTG AGCG CACCG GCGCGTCGTGCGCTG TERM 1104 1388610 - 1388587 - g 75 -4.5 -4.66833 | gap 1, opp_overlap 1388586 CCGCAAGCGTAAAAA GGTGC-CGCT AGGCG AGCGTGCGCC GTTGCTGCGGCCCAC TERM 1105 1389080 - 1389063 - g 78 -4 -4.79949 | overlap 1389064 1389075 GCCCCAAAAAAACAA TCGGCG GAATGA CGCCGG CGGCCTATGCCCAGC XOO1361 1388084 - 1389133 + | IS1404 transposase ybaL 1391006 - 1389297 - | cation:proton antiporter XOO4756 1391506 - 1391748 + | hypothetical protein TERM 1106 1391807 - 1391759 - T 74 -11.9 -3.45321 | overlap 1391756 1391745 1391749 1391752 ACTGACAACTGACAA CTGACAACTGACAATTGACAATT GAC AATTGACAATTGACAACTGGCAG ACATTGATCGAGGTG TERM 1107 1392045 - 1392016 - T 100 -18.7 -5.04385 | opp_overlap 1392015 1392012 CACACGCCTAAAAAA CAGGCATCACCGA GAGA TCGGTGACGCCTG CTGATGTCTGCGTTG bfeA 1394556 - 1392157 - | ferric enterobactin receptor TERM 1108 1393283 - 1393259 - G 71 -7.8 -4.15044 | gap 1, opp_overlap 1393260, overlap 1393261 TCGGGGTCGAAGAAA TACGACGCCGG CGAG CCGGCGACG-A TCTCGTAGCGGTCCT TERM 1109 1393282 - 1393261 - G 81 -12.9 -3.6761 | opp_overlap 1393260, overlap 1393259 GGGGTCGAAGAAATA CGACGCCGG CGAG CCGGCGACG ATCTCGTAGCGGTCC TERM 1110 1393609 - 1393633 + g 73 -12.1 -3.40403 | opp_overlap 1393611 GAAGCCGTTGGGATA CACCGCCTGCA CAT TGCGGTCGGTG TTGTCGTAGGCACGG bfeA 1397276 - 1394889 - | ferric enterobactin receptor TERM 1111 1396638 - 1396674 + g 81 -16.6 -2.77523 | gap 1, opp_overlap 1396657, overlap 1396635 1396633 CAGATGTACCTTGCC GGTG-CCGGCGAAGCTG AAAC CGGCATCGCCGGACACC TGATATTGCTCGCCG TERM 1112 1396669 - 1396657 - G 71 -10.5 -3.66178 | opp_overlap 1396638 1396635 1396633 CCGGCGAAGCTGAAA CCGGC ATC GCCGG ACACCTGATATTGCT TERM 1113 1396788 - 1396817 + g 80 -14.5 -3.06796 | gap 1, opp_overlap 1396768 GATGGCATCCGAGCC GTATTGCGCGGATG CAC CAT-CGCGCAATAC TTCGATACGCTCCAC XOO1365 1397990 - 1397550 - | hypothetical protein bfeA 1400841 - 1398454 - | ferric enterobactin receptor TERM 1114 1401926 - 1401947 + G 78 -8 -4.45544 | gap 1, opp_overlap 1401891, overlap 1401929 GTTCCGCATCCAGTT CGCGCAGCC CAATC GGCTGC-CG TTTTCGTTGATCCGG TERM 1115 1402283 - 1402316 + G 77 -5.2 -4.67353 | opp_overlap 1402304 TCACTTCCGCGACCT GTCGCCGGATGGCT CCAATC AGGCGTTCCGCGAC TTTTTGGGTAAGTGG yheS 1400973 - 1402937 + | ABC transporter ATP-binding protein XOO1368 1403183 - 1403635 + | hypothetical protein ampR 1404504 - 1403659 - | transcriptional activator ampR family TERM 1116 1403848 - 1403818 - G 72 -11.2 -3.53224 | gap 1, overlap 1403821 1403836 1403837 CAGGTCCTGGCGAAA CATCGGCAGCGGC AACAAG GCCAC-GCCGATG CCGGCCGCCGCTGCG TERM 1117 1404005 - 1403974 - G 77 -12.2 -3.66286 | ATACGATCGCAATAA CGGCACGCGCGCCA TTGC CGGCGCACACACCG GCGCAACGGGCGCTT bla 1404605 - 1405546 + | beta lactamase TERM 1118 1405926 - 1405947 + G 76 -9.4 -4.16943 | TGCGACTGGCTGACC GCACGCGG CATCAC CTGCGTGC TTTTGAGGTATCGCG xynB 1405587 - 1406432 + | xylanase TERM 1119 1406889 - 1406920 + F 82 -10.8 -4.07687 | opp_overlap 1406912 GCGTTCTATGAGCCG CGCCTGCCCTGC GATGCCAA GCAGGTCGGGCG TTTTCGCGCGGCCAT XOO1376 1409041 - 1409244 + | hypothetical protein XOO1377 1409263 - 1409355 + | hypothetical protein TERM 1120 1409410 - 1409372 - T 90 -15.4 -3.78775 | gap 1, opp_overlap 1409374 1409375 1409377, overlap 1409373 TCGCGCATCATGAAA GCGGACAACGGCGCAGG GAGCTT CCTGCGCCGTTGTC-GT TTGTGGGATGTGTGG TERM 1121 1409409 - 1409373 - T 91 -18.9 -2.87051 | gap 1, opp_overlap 1409374 1409375 1409377, overlap 1409372 CGCGCATCATGAAAG CGGACAACGGCGCAGG GAGCTT CCTGCGCCGTTGTC-G TTTGTGGGATGTGTG TERM 1122 1409374 - 1409409 + T 100 -19.8 -3.91858 | opp_overlap 1409373 1409372, overlap 1409375 1409377 GCGCATCATGAAAGC GGACAACGGCGCAGGG AGCT TCCTGCGCCGTTGTCG TTTGTGGGATGTGTG TERM 1123 1409375 - 1409408 + T 100 -23.3 -2.94633 | opp_overlap 1409373 1409372, overlap 1409374 1409377 CGCATCATGAAAGCG GACAACGGCGCAGGG AGCT TCCTGCGCCGTTGTC GTTTGTGGGATGTGT TERM 1124 1409377 - 1409406 + T 93 -20.1 -3.02186 | opp_overlap 1409373 1409372, overlap 1409375 1409374 CATCATGAAAGCGGA CAACGGCGCAGGG AGCT TCCTGCGCCGTTG TCGTTTGTGGGATGT XOO1378 1410861 - 1409893 - | putative transposase TERM 1125 1410162 - 1410151 - G 76 -2.2 -4.8622 | overlap 1410152 GGCGGCAATGAAAAA TGCA GCCT CGCA GCTCTGCAACTCGTC hrpG 1411999 - 1411025 - | HrpG hrpXct 1412578 - 1414008 + | HrpX protein TERM 1126 1414018 - 1414052 + F 89 -10.7 -4.30719 | gap 1, overlap 1414019 CGGTAATCTCTTGGC ACGCCACGGCTTGGTA GCGC TACCT-GCCGTGGCGG TTTGTTGTCGGCGGA TERM 1127 1414019 - 1414051 + F 80 -14.2 -3.1811 | gap 1, overlap 1414018 GGTAATCTCTTGGCA CGCCACGGCTTGGTA GCGC TACCT-GCCGTGGCG GTTTGTTGTCGGCGG TERM 1128 1415346 - 1415328 - g 72 -11.7 -3.44146 | opp_overlap 1415314 CTGCGTCATAACGAA GCGCTGC TGGGC GCAGCGC TGTGCGATGAGCGCC TERM 1129 1415533 - 1415543 + G 74 -4.6 -4.57569 | overlap 1415494 ATGGCAACCGGTATG CGGT GGT GCCG TTTTTGCGGCGCTGG hsp90xc 1414113 - 1416089 + | Hsp90xo protein TERM 1130 1416607 - 1416570 - g 74 -4.8 -4.58395 | gap 2, opp_overlap 1416604, overlap 1416572 CTGAGCTGCGAAAAA GCCG-AT-GCCTTGCTCG ACGA CGGGCACGGCGACGCGGC GCTGCAGTATCTGGA XOO1382 1416114 - 1418438 + | hypothetical protein TERM 1131 1418700 - 1418675 - T 76 -15.5 -2.52464 | opp_overlap 1418643, overlap 1418643 1418696 1418697 TGCCTGCTGAATTGA GCGCATTGTGC TTGA GCACAACGCGC AGCGAGATCGCTTCG XOO1383 1419594 - 1419037 - | IS1478 transposase XOO1384 1420433 - 1419567 - | IS1404 transposase XOO4757 1420549 - 1420286 - | IS1404 transposase XOO1385 1421073 - 1420594 - | IS1478 transposase TERM 1132 1420707 - 1420676 - G 95 -15.1 -4.13945 | ATGGCCACGCTAAAA CGCCCGACCTGCG TGGCAT CGCAGGGCAGGCG CGGCTGATAGAACGC TERM 1133 1422271 - 1422295 + G 79 -5.7 -4.59773 | opp_overlap 1422274 GCGTATTTTCCCCAA CGACGATTCGG CGC TCAAATCGTTG TTTTTGGCCGTGCGC tnpX1 1421210 - 1422412 + | IS1113 transposase XOO1387 1423919 - 1422504 - | glutamine synthetase family protein TERM 1134 1423588 - 1423566 - G 71 -9.1 -3.77588 | ATCGCAGATCAACAA TGCCGTTGC GTCGA GCCACGGCA GCAATCGTAAGCTGG XOO1388 1424857 - 1423922 - | homoserine O-succinyltransferase TERM 1135 1424878 - 1424900 + r 74 -14.2 -2.62515 | opp_overlap 1424881 1424882, overlap 1424882 TGCGACCTCCTTTAA CAAGCGGCAG CGT CTGCCGTTTG TAGTATGAGAAACTT TERM 1136 1424882 - 1424896 + r 82 -11.4 -4.0162 | opp_overlap 1424881 1424882, overlap 1424878 ACCTCCTTTAACAAG CGGCAG CGT CTGCCG TTTGTAGTATGAGAA rtxC 1427503 - 1426436 - | RtxC TERM 1137 1427079 - 1427047 - G 70 -7.8 -4.06384 | overlap 1427048 CGCGAACAGTATAAA CCCCTGACTTGA CAAAGAACT TCAAGTCAGGGT CCTGCTCTGGATCAC TERM 1138 1427452 - 1427465 + g 100 -3.1 -5.90981 | gap 1, opp_overlap 1427438 ATCGCTTATTTCTGA GC-GAC CAA GTCTGC TTTTTTTTCATATGA rtxA 1428825 - 1427503 - | RtxA XOO1391 1429979 - 1428825 - | hypothetical protein TERM 1139 1429173 - 1429185 + g 85 -4.8 -5.055 | opp_overlap 1429173 TCGTACGATGCAATA TCGC CTTCT GCGA TTTTTTACGCCTTCA TERM 1140 1430248 - 1430233 - R 80 -6 -4.77567 | overlap 1430234 ATTTTGAGAAGAAAA TGCGCG AGGA CGCGCT ATGGAAAATTACTCG TERM 1141 1430330 - 1430363 + r 75 -3.1 -4.89477 | gap 1, overlap 1430331 ACGCTCGTACGCACT GGATCATTGC-GCTGA AGA TCAGCGGCACCGATCA TTTTCTTATTCAACG XOO1392 1431254 - 1431078 - | IS1404 transposase TERM 1142 1431128 - 1431151 + g 93 -5.9 -5.40474 | overlap 1431132 ACTGCTGGGCATAGG CAGCCGGCG TCATTC CGCCGATTG TTTTTTTGGGGCGGT XOO1393 1432260 - 1431244 - | transposase TERM 1143 1431375 - 1431359 - G 74 -10.1 -3.70902 | opp_overlap 1431354, overlap 1431360 CGGGTCAGATCGAAA CGGCGGT TGA ACCGCCA CATCGTCTCTGCCAG TERM 1144 1432108 - 1432093 - G 74 -4.6 -4.55697 | ACGCGGACAAACAAA GCTCTG TGGC CAGCGC GAGATCTCCAACGCC XOO1399 1433782 - 1433997 + | IS1479 transposase bedB 1434472 - 1434143 - | benzene 1,2-dioxygenase ferredoxin protein XOO1401 1435008 - 1434469 - | acetyltransferase nifS 1436503 - 1435259 - | cysteine desulfurase TERM 1145 1436265 - 1436243 - G 79 -11.3 -3.87994 | gap 1, opp_overlap 1436226 ACGCACGTTGAGAAA GCGCGCG-AG CTTG CTGCGCGCGC CCTCGAACGCGTCGG ynhC 1437762 - 1436500 - | ABC transporter permease ynhD 1438526 - 1437762 - | ABC transporter ATP-binding protein TERM 1146 1438681 - 1438694 + r 71 -8.1 -3.96327 | ATTTGCCCTGGCTGG CGCGT GGCG ACGCG TTTGTCATGGCCAAT ynhE 1440241 - 1438784 - | cysteine desulfurase activator complex subunit SufB XOO1406 1440715 - 1440257 - | hypothetical protein XOO1407 1440887 - 1441354 + | hypothetical protein TERM 1147 1441784 - 1441794 + T 73 -3.2 -4.69053 | overlap 1441781 GCGCCCACCTGACAG CTGC GCA GTAG TTTTGTTGGCTGCTC TERM 1148 1441949 - 1441924 - T 81 -4.5 -5.00616 | opp_overlap 1441923 1441939 1441943 TGCTGCGGCAAAAAA GCCAGTGGCCG CGAT CTGCCATGGGC CGTGTTTGCTGCTTG TERM 1149 1442185 - 1442206 + T 100 -11.5 -5.1287 | opp_overlap 1442184 1442185 GGTTGACGCAAAAAG GCCTGGTGC TGCT GCGCCGGGC TTTTTTCGATCTGCA XOO1410 1442878 - 1442282 - | hypothetical protein XOO1411 1443476 - 1442934 - | hypothetical protein XOO1412 1443734 - 1443534 - | hypothetical protein TERM 1150 1443772 - 1443798 + r 81 -10.1 -4.18494 | overlap 1443775 TCGAATTCGATGGTG CAGCGGTCGTC ACAGG GGCGGCCGTTG TTTTCGATGGGCGTG TERM 1151 1443775 - 1443795 + r 76 -8.2 -4.21812 | overlap 1443772 AATTCGATGGTGCAG CGGTCGTC ACAGG GGCGGCCG TTGTTTTCGATGGGC XOO1413 1444664 - 1443933 - | peptidase TERM 1152 1444654 - 1444637 - G 100 -12.7 -5.81412 | opp_overlap 1444637 GCGACCGAAAAAAAA GACGGCC CGCA GGCCGTC TTCTTGACACCGGAT TERM 1153 1444637 - 1444654 + g 81 -12.7 -3.61517 | opp_overlap 1444637 GCGACCGAAAAAAAA GACGGCC CGCA GGCCGTC TTCTTGACACCGGAT hup 1445105 - 1444680 - | histone-like protein TERM 1154 1445043 - 1445055 + g 88 -9.1 -4.68424 | CGGCTTTGCGGTCTT GGTCG CGG CGACC TTTTTCACTGCCTTC TERM 1155 1445290 - 1445264 - R 82 -5.8 -4.84359 | opp_overlap 1445286 CCAGCGGCACAAAAA GCCTACAAAACG CAT CGTTCTGCGAGC GCAGTGCGCGCCTTC TERM 1156 1445499 - 1445513 + r 73 -12.8 -3.22448 | AAATGTAGGGTTTTC CGGCGC CAT GCGCCG TTACTCGCTCTTGCT TERM 1157 1445630 - 1445661 + r 74 -12.4 -3.4759 | gap 1, overlap 1445621 1445620 CCCGAGCGGTGTGCG TTGGGACGCGCGCAG GTT TTGCG-GCGTCTCAA TTAATTCTACTGCGT XOO1415 1447132 - 1445750 - | putative ISXo8 transposase proC 1448036 - 1447140 - | pyrroline-5-carboxylate reductase XOO1417 1448574 - 1448044 - | hypothetical protein TERM 1158 1448605 - 1448639 + H 75 -4.1 -4.72272 | gap 1, overlap 1448609 GGCGCGCTGGCCCTG CGCGGCCAGC-GCGGC AACA GCCTCGGCTGGCTTGG TTTTTGATGCCGCCA TERM 1159 1448609 - 1448635 + H 76 -10.1 -3.84901 | gap 1, overlap 1448605 CGCTGGCCCTGCGCG GCCAGC-GCGGC AACA GCCTCGGCTGGC TTGGTTTTTGATGCC pilT 1449100 - 1450137 + | twitching motility protein pilU 1450200 - 1451381 + | twitching motility protein TERM 1160 1452195 - 1452217 + T 93 -2.7 -5.55664 | gap 1, opp_overlap 1452191, overlap 1452198 GGTGCAGATGAGCTT CGAC-GCGAT GCTG ATGGCGGTCG TTTTTTTCGTGCTGA TERM 1161 1452450 - 1452476 + T 73 -6.4 -4.26003 | overlap 1452451 CGCTGCGAGCATTGC TCGCGTGCGCCT GAT GGGCGCAGTCGG TTTGTTCGCTCTTCT TERM 1162 1452541 - 1452510 - T 95 -11.4 -4.63932 | GAGCGGCTAACAAAA CGACTGCGCTCACC GCCA GGCGGGCGCGGCCG GTGCTCGGAATCCTC XOO1422 1452797 - 1452555 - | hypothetical protein TERM 1163 1452884 - 1452861 - R 85 -10.2 -4.36914 | overlap 1452863 GCCGGCCGGATAAAA CGTGCCGCGC TAGC GCGCATCACG CCAGCCGGAAATGCC tag 1453712 - 1452951 - | DNA-3-methyladenine glycosylase I XOO1424 1454825 - 1453983 - | hypothetical protein algH 1454793 - 1455359 + | hypothetical protein XOO1426 1455316 - 1455819 + | Holliday junction resolvase-like protein pyrB 1455833 - 1456780 + | aspartate carbamoyltransferase catalytic subunit TERM 1164 1456822 - 1456797 - f 73 -8.1 -4.0342 | CGCAACTAACAACAA CTGCGCTCACC GCCA GGCGGGCGCGG CCGGTGCTGGAATCG TERM 1165 1457001 - 1456960 - f 84 -16 -3.01712 | gap 1, opp_overlap 1456954 1456963 1456967, overlap 1456984 TTCGCCGCCCCAATA GCTGCAATGCGACCGCGCA ACCAA CGCGCGGTCGCATTG-ATC TGTGAATGGTTGATT TERM 1166 1456963 - 1456999 + F 90 -18.1 -2.93435 | opp_overlap 1456960 1456984, overlap 1456954 1456967 GCCGCCCCAATAGCT GCAATGCGACCGCGC AACCAAC GCGCGGTCGCATTGA TCTGTGAATGGTTGA TERM 1167 1456967 - 1456995 + F 91 -17.5 -3.32993 | opp_overlap 1456960 1456984, overlap 1456963 1456954 CCCCAATAGCTGCAA TGCGACCGCGC AACCAAC GCGCGGTCGCA TTGATCTGTGAATGG osmC 1457227 - 1457661 + | osmotically inducible protein XOO1429 1457745 - 1458413 + | hypothetical protein TERM 1168 1458465 - 1458496 + T 100 -21 -4.57569 | opp_overlap 1458468 1458471 CGGCATCGGGTCGAA CAAGAACGCTGCGG GAAA CCGCGGCGTTCTTG TTTTTGGCGCAATGG TERM 1169 1458493 - 1458468 - T 85 -14.7 -3.61715 | opp_overlap 1458465, overlap 1458471 CATCGGGTCGAACAA GAACGCTGCGG GAAA CCGCGGCGTTC TTGTTTTTGGCGCAA TERM 1170 1458490 - 1458471 - T 76 -10.6 -3.9461 | opp_overlap 1458465, overlap 1458468 CGGGTCGAACAAGAA CGCTGCGG GAAA CCGCGGCG TTCTTGTTTTTGGCG XOO1430 1459607 - 1458699 - | hypothetical protein XOO1431 1459881 - 1459612 - | hypothetical protein XOO1432 1460588 - 1459809 - | hypothetical protein TERM 1171 1460177 - 1460139 - GH 78 -13.8 -3.21416 | opp_overlap 1460133 1460161 1460170 CAGCCGCACCAGCAA GGCGCCGTGCCGGTCGAA CAC TTCCACCGGCAGCACGCC GGCCGTGCATTGCTG lysA 1460678 - 1463287 + | bifunctional aspartate kinase/diaminopimelate decarboxylase protein TERM 1172 1463647 - 1463657 + G 77 -8.2 -4.23892 | overlap 1463633 TGCCGCTGCTGTGGG CGGC GGT GCCG TTTTCCATGATTGAA XOO1434 1463271 - 1463729 + | hypothetical protein XOO1435 1463726 - 1465081 + | hypothetical protein murD 1465062 - 1466468 + | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase XOO1437 1466785 - 1467579 + | hypothetical protein ispB 1468762 - 1467764 - | octaprenyl-diphosphate synthase TERM 1173 1469197 - 1469208 + G 76 -5.8 -4.57073 | opp_overlap 1469186 GAACGCACCGAGTGG CACC GCGT GGTG TTTTTCGGAAAGCTG ssb 1469038 - 1469574 + | single-strand DNA-binding protein TERM 1174 1469599 - 1469631 + T 82 -14.8 -3.30124 | opp_overlap 1469602 1469606 CGTCGCTGCCTCACC CAAGGAAGGCCCGC ATTGC GCGGGCCTTCCGCG TTATGGGCAATAGCG TERM 1175 1469628 - 1469602 - T 93 -20.2 -3.05384 | opp_overlap 1469599, overlap 1469606 CGCTGCCTCACCCAA GGAAGGCCCGCA TTG CGCGGGCCTTCC GCGTTATGGGCAATA TERM 1176 1469624 - 1469606 - T 77 -13.8 -3.37344 | opp_overlap 1469599, overlap 1469602 GCCTCACCCAAGGAA GGCCCGCA TTG CGCGGGCC TTCCGCGTTATGGGC XOO1440 1471341 - 1469857 - | response regulator TERM 1177 1472244 - 1472219 - H 93 -9.7 -4.6902 | gap 1, opp_overlap 1472216 1472211 CGAGAAGTTGAAAAA GGTGCGCGCGCT CGG AGC-CGAGCACC TCCTCAATTATCGGC XOO1443 1472598 - 1473773 + | putative ISXo8 transposase TERM 1178 1473953 - 1473968 + G 74 -4.6 -4.55697 | GGCGTTGGAGATCTC GCGCTG GCCA CAGGGC TTTGTTTGTCCGCGT TERM 1179 1474686 - 1474702 + G 74 -10.1 -3.70902 | opp_overlap 1474681, overlap 1474687 CTGGCAGAGACGATG TGGCGGT TCA ACCGCCG TTTCGATCTGACCCG XOO1444 1473819 - 1474817 + | transposase XOO1445 1475197 - 1475874 + | hydrolase TERM 1180 1476017 - 1476048 + T 95 -11.4 -4.63932 | overlap 1476045 GCCGATTCCGAGCAC CGGCCGCGCCCGCC TGGC GGTGAGCGCAGTCG TTTTGTTAGCGGCTC TERM 1181 1476157 - 1476188 + T 81 -15.8 -3.05463 | CGCTCACCGTCGCGG GACCCGTGGCGGCA TGGA TGCCGCCACGGAGC TTGCATGGACGGACT TERM 1182 1476332 - 1476367 + T 100 -24.2 -3.72453 | opp_overlap 1476310 1476309 1476332 TTGCATCCACATCAA CGCAACAGGGCGCGAT TCGC ATCGTGCCCTGTTGCG TTTCCACTTCTTGAT TERM 1183 1476367 - 1476332 - T 100 -22 -3.2794 | opp_overlap 1476332, overlap 1476310 1476309 TTGCATCCACATCAA CGCAACAGGGCGCGAT TCGC ATCGTGCCCTGTTGCG TTTCCACTTCTTGAT XOO1446 1476636 - 1476412 - | hypothetical protein cstA 1478816 - 1476636 - | carbon starvation protein A XOO1448 1478775 - 1479797 + | pirin TERM 1184 1479804 - 1479786 - fH 80 -14.6 -3.15544 | GTCGATTTCCAGGAA GGCCGGTT TTG AACCGGCC CGCTTGCACGACGGC XOO1449 1479968 - 1480246 + | hypothetical protein TERM 1185 1480279 - 1480334 + G 75 -14.6 -2.77036 | overlap 1480284 1480285 CCGACGGCGCCCGAC CGCTGCGGCGCGGCCTGC-CGCGCGC CTGCAT GCGCGCCTGCATGC-GCGCCGCCGCC TCGTCTGTTAAATTC TERM 1186 1480285 - 1480339 + G 76 -14.1 -3.15056 | gap 1, overlap 1480279 1480284 GCGCCCGACCGCTGC GGCGCGGCCTGCCGCGCGCCTGCATG CGCG CCTGCATGCGCGCCGCCG-CCTCGTC TGTTAAATTCGCCCT TERM 1187 1482853 - 1482795 - g 82 -15.9 -3.05384 | GGCGCGGGCAGCGAA GCGGCCATCGCCGGCGA-CGCCCGGCTGC ACA GCGGCCAGGCAATCGGCGT-GCTGGCCGC GGCGGTGGACGGCCG XOO1450 1480248 - 1483232 + | hypothetical protein XOO1451 1483229 - 1484176 + | hypothetical protein XOO1452 1486540 - 1488828 + | hypothetical protein TERM 1188 1490369 - 1490311 - g 82 -15.9 -3.05384 | GGCGCGGGCAGCGAA GCGGCCATCGCCGGCGA-CGCCCGGCTGC ACA GCGGCCAGGCAATCGGCGT-GCTGGCCGC GGCGGTGGACGGCCG XOO1453 1488850 - 1490751 + | VGR-related protein TERM 1189 1490963 - 1490941 - f 100 -10.6 -4.73388 | overlap 1490943 AACCTCTATGAAAAA TACGCCCTGA CGC TCAGGACGCA TGGCCCCCGCGTCTT TERM 1190 1490961 - 1490943 - f 82 -11 -3.98256 | overlap 1490941 CCTCTATGAAAAATA CGCCCTGA CGC TCAGGACG CATGGCCCCCGCGTC TERM 1191 1492407 - 1492387 - f 81 -3.9 -4.99972 | opp_overlap 1492394 1492395, overlap 1492389 1492395 AGAAAAGACTAAAAA TAGACAAGG CGG CCCTGCCTG CATTAATTGCAAAGT XOO1454 1492778 - 1493011 + | hypothetical protein XOO4758 1493008 - 1493160 + | hypothetical protein XOO4759 1493646 - 1493798 + | hypothetical protein XOO1455 1493779 - 1494585 + | hypothetical protein TERM 1192 1495497 - 1495514 + G 72 -12.7 -3.16191 | GGCAAGGTGGGGCCG GCGCAGG TCAA CCTGCGC TTCCTCGGCCTCTAC TERM 1193 1496051 - 1496081 + G 71 -9.8 -3.74693 | opp_overlap 1496035 GCAGCGCTACTGGCG CTGGCGC-GCGTCC AAGCG GGACGCCGCGC-AG TTTCGTGCGATGGCC XOO1456 1494582 - 1496990 + | hypothetical protein XOO1457 1497790 - 1497335 - | hypothetical protein XOO1458 1498927 - 1498037 - | pirin-related protein TERM 1194 1499093 - 1499053 - R 72 -13.4 -2.71712 | overlap 1499052 CCGGTCGCTGCAAAG GC-CTGGCGCCGCCCATTGA CCG TCA-TGGGCGACGCCATCGC GAAGGATCCGATCAG nfi 1500402 - 1499689 - | endonuclease V gpm 1500506 - 1501255 + | phosphoglyceromutase TERM 1195 1501271 - 1501303 + F 74 -12.8 -3.25823 | gap 2, opp_overlap 1501257, overlap 1501272 ACGCCGCTGATGGTT G-CAG-CGCTGCGTGC GTC GCGCGCAGCGCCTGTC TTCGTGTGGCACGCG TERM 1196 1501272 - 1501301 + F 86 -16.5 -3.19602 | gap 1, opp_overlap 1501257, overlap 1501271 CGCCGCTGATGGTTG CAG-CGCTGCGTGC GTC GCGCGCAGCGCCTG TCTTCGTGTGGCACG TERM 1197 1501308 - 1501341 + F 81 -15.3 -3.05463 | gap 1, overlap 1501312 CAGCGCCTGTCTTCG TGTGGCACGCGGCTGC AAC GC-GCCGCGTGCTGCG TTGAATGGAAGCGGT TERM 1198 1501312 - 1501337 + F 83 -16.9 -2.54896 | gap 1, overlap 1501308 GCCTGTCTTCGTGTG GCACGCGGCTGC AAC GC-GCCGCGTGC TGCGTTGAATGGAAG XOO1461 1501517 - 1501858 + | hypothetical protein TERM 1199 1502075 - 1502104 + G 81 -3.5 -5.00616 | gap 1, opp_overlap 1502047 1502055, overlap 1502076 TTCGATGCGCTGGTC TTCGACAGC-GGTT ACC GACCGGCTGCCGAC TTTTTTCGACCGCGC TERM 1200 1503247 - 1503212 - g 89 -13.3 -4.07687 | gap 1, opp_overlap 1503237, overlap 1503213 ATTTCTCCGCCAAAA CCCTGCGCGGGCAGCA GCACA TGCTGCC-GCGCTGGA AGCGCACCTTGAATG TERM 1201 1503246 - 1503213 - g 80 -14.6 -3.04398 | gap 1, opp_overlap 1503237, overlap 1503212 TTTCTCCGCCAAAAC CCTGCGCGGGCAGCA GCACA TGCTGCC-GCGCTGG AAGCGCACCTTGAAT XOO1462 1502020 - 1504248 + | metallopeptidase TERM 1202 1504255 - 1504291 + T 81 -13.7 -3.64703 | overlap 1504256 ATCTGGTAAGTGCGG GCGCGCGAGGGTTGTTG CTT CGATAGCTCTCGCGCGG TTTGGCTGAAGACGC TERM 1203 1504256 - 1504290 + T 84 -17.2 -2.78679 | overlap 1504255 TCTGGTAAGTGCGGG CGCGCGAGGGTTGTTG CTT CGATAGCTCTCGCGCG GTTTGGCTGAAGACG TERM 1204 1505411 - 1505389 - T 78 -6.8 -4.57073 | GACCCGCCGGAAAAA GCCGAAGGCG CGC CGCCGCAGGC CGACTGGATGACGCC cheB 1507317 - 1506196 - | chemotaxis-specific methylesterase TERM 1205 1506524 - 1506497 - G 74 -10.6 -3.73953 | gap 1, opp_overlap 1506496, overlap 1506499 AGCACTTCGACGAAA TACTGC-GCGCCG CTA CGACGCAGCAGCA GATGTTTGCCGCCCG TERM 1206 1506522 - 1506499 - G 72 -11 -3.45324 | gap 1, opp_overlap 1506496, overlap 1506497 CACTTCGACGAAATA CTGC-GCGCCG CTA CGACGCAGCAG CAGATGTTTGCCGCC TERM 1207 1506976 - 1507008 + g 77 -4.8 -4.66163 | overlap 1506971 CACCGCCACCGCGCC GGCGGCCAGTG-CATC CAT GGTGACGCGGGC-GCC TTTTTCGGTGAGCGT cheR 1508159 - 1507332 - | response regulator for chemotaxis vieA 1509444 - 1508143 - | response regulator cheW 1509968 - 1509453 - | chemotaxis protein mcp 1512147 - 1509979 - | chemotaxis protein TERM 1208 1510749 - 1510763 + g 71 -7.8 -4.15044 | AGGCGTTCATCTGTT CTAGCG AGG CGCTGG TTTCTTCCACGCCGG TERM 1209 1511205 - 1511248 + g 81 -16 -3.01924 | opp_overlap 1511197 1511209 TGCGAAAGTCGCCAT CGAAGCGGGCGCTGTCGATG ACCA CATCGATATCGCCGGCCTCG TGTTCGGCCGACATG TERM 1210 1511392 - 1511407 + g 71 -10.4 -3.61715 | GCCGAATTCGCTGAC GCAGGC GATG GCCTGC TTCTTGACCGCGATA TERM 1211 1511663 - 1511676 + g 79 -2.3 -5.00884 | opp_overlap 1511640 CCAAATTCGGCCACA CACGC CATT GCCTG TTTTTTCACCGCGAT cheA 1514237 - 1512216 - | chemotaxis histidine protein kinase XOO1471 1514585 - 1514256 - | hypothetical protein TERM 1212 1515011 - 1514982 - R 89 -17.3 -3.1247 | opp_overlap 1514981 1514980 1514984, overlap 1514987 ACGTGCCACAGCGAA CACAAGCAGGTGA TTGC CCACCTGCTTGTG CGTTATTCAAGGCCT TERM 1213 1514984 - 1515009 + r 71 -13.4 -2.6563 | opp_overlap 1514982 1514987, overlap 1514981 1514980 GTGCCACAGCGAACA CAAGCAGGTG ATTGCC CACCTGCTTG TGCGTTATTCAAGGC TERM 1214 1515006 - 1514987 - R 74 -10 -3.70446 | opp_overlap 1514984 1514981 1514980, overlap 1514982 CCACAGCGAACACAA GCAGGTGA TTGC CCACCTGC TTGTGCGTTATTCAA mfd 1518539 - 1515075 - | transcription-repair coupling factor TERM 1215 1518071 - 1518092 + g 71 -4.3 -4.56597 | overlap 1518072 GCGGGACGTTGCGGT AGCCGGC GCTTTCCA GCCGGCG TTTTTCCGCACCCAG XOO1473 1519485 - 1518943 - | hypothetical protein XOO1474 1520985 - 1519897 - | hypothetical protein XOO1475 1521627 - 1521151 - | putative transposase XOO1476 1521964 - 1521593 - | putative transposase creC 1522250 - 1522816 + | two-component system sensor protein TERM 1216 1522910 - 1522877 - f 88 -17.5 -3.06796 | opp_overlap 1522876 1522875 CCTTAGCGCATCCAA GGCTGCGACATGCGC CAAA GCACATGCCGCAACC GCTTTCCTAATAAGT XOO1478 1522972 - 1523601 + | putative transposase XOO1479 1523636 - 1524007 + | putative transposase XOO1480 1524841 - 1524029 - | cysteine protease TERM 1217 1525520 - 1525531 + G 70 -2.2 -4.65895 | CAGCGCAAGGTCTGG TGCA AGCA TGCG TTTTTGCATGCAGCA creD 1525256 - 1525828 + | inner membrane protein TERM 1218 1525852 - 1525838 - T 73 -11.4 -3.55444 | CCCTGATTGTTGAAA CGGTGC TCG GCACCG GCAGGTGCTGCCGCA TERM 1219 1527030 - 1526997 - T 91 -17.5 -3.38768 | opp_overlap 1526996 1526995 TCAGACCATCCATAA GGCTGCGACATGCGC CAAA GCACATGCCGCAACC GCTTTACTCATAAGT XOO1485 1527130 - 1527038 - | putative transposase XOO1486 1528082 - 1527183 - | putative transposase XOO1487 1528982 - 1528170 - | cysteine protease TERM 1220 1531201 - 1531168 - H 91 -17.5 -3.36327 | opp_overlap 1531167 1531166 TCAGGCCATCCATAA GGCTGCGACATGCGC CAAA GCACATGCCGCAACC GCTTTAATCGCACCG XOO1494 1532429 - 1532521 + | IS1479 transposase TERM 1221 1532671 - 1532682 + T 74 -2.2 -4.8622 | overlap 1532669 GACGAGTTGCAGAGC TGCG AGGC TGCA TTTTTCATTGCCGCC XOO1497 1533340 - 1533035 - | cysteine protease TERM 1222 1533697 - 1533726 + G 81 -4.9 -4.86731 | gap 1 TTCCACGCACCGTTC CGCGC-CGCCGG CATCGAC CCGGCCAGCGTG TTTTATTTCGGCGAA XOO1498 1533445 - 1534002 + | hypothetical protein XOO4761 1534346 - 1534101 - | hypothetical protein nthA 1534095 - 1534355 + | nitrilase XOO1501 1535298 - 1534330 - | transposase TERM 1223 1534359 - 1534385 + g 71 -7.3 -4.18494 | gap 1, overlap 1534359 CAACGCTGTTGAGGA C-CTCCTCGGAG AAGA CTTCGAGGGGCG TTTTGAATCCAAGTA nthA 1535367 - 1536092 + | nitrilase XOO4762 1536114 - 1536674 + | hypothetical protein TERM 1224 1536984 - 1537020 + GF 79 -9.4 -4.11394 | opp_overlap 1536975 TCAAATGGCCGGGTG CGCGCACGGTGC-TGGCC GCG GACCAGGCGCCG-GTGCG TTTTCAGCATGACCT XOO1503 1536398 - 1537213 + | hypothetical protein TERM 1225 1537682 - 1537636 - g 87 -7.9 -4.81083 | gap 1, overlap 1537637 GCCAAGCAGGAAAAA CCGCGTTACGAC-GGCGCCGCC CGCG AGCAGAACCTGCCGTATCGCGA CGATCCCAATCGCGT gltX 1537282 - 1538685 + | glutamyl-tRNA synthetase XOO1505 1538672 - 1539205 + | FUR family transcriptional regulator XOO4763 1540847 - 1541050 + | hypothetical protein XOO1508 1542267 - 1541140 - | IS1478 transposase TERM 1226 1541201 - 1541175 - G 71 -7.3 -4.18494 | gap 1, overlap 1541176 TACTTGGATTCAAAA CGCCCCTCGAAG TCTT CTCCGAGGAG-G TCCTCAACAGCGTTG XOO1509 1543097 - 1542612 - | hypothetical protein cspA 1543325 - 1543540 + | major cold shock protein TERM 1227 1543602 - 1543573 - T 83 -16.5 -2.92463 | opp_overlap 1543574, overlap 1543576 1543580 CGCATCACGCAGACA GCAGAAAGGCCCG CGAT CGGGCCTTTCTGT TTTTTTGCTGTTTAT TERM 1228 1543574 - 1543601 + T 100 -20 -5.66989 | opp_overlap 1543573 1543576 1543580 GCATCACGCAGACAG CAGAAAGGCCCG CGAT CGGGCCTTTCTG TTTTTTTGCTGTTTA TERM 1229 1543599 - 1543576 - T 81 -16.8 -2.70528 | opp_overlap 1543574, overlap 1543573 1543580 ATCACGCAGACAGCA GAAAGGCCCG CGAT CGGGCCTTTC TGTTTTTTTGCTGTT TERM 1230 1543595 - 1543580 - T 83 -11.8 -4.04318 | opp_overlap 1543574, overlap 1543576 1543573 CGCAGACAGCAGAAA GGCCCG CGAT CGGGCC TTTCTGTTTTTTTGC TERM 1231 1543747 - 1543785 + T 71 -13.1 -3.05384 | gap 1 GCACGCGTCGTATTT CCTGGCGACGCTGCGGCG ATGC TGCCGCAGCGT-GCACGG TTGGATCAGCGCAGC pcp 1544321 - 1543791 - | peptidoglycan-associated outer membrane lipoprotein XOO1512 1544914 - 1544402 - | hypothetical protein moeB 1544903 - 1545733 + | molybdopterin biosynthesis protein XOO1514 1546562 - 1545795 - | hypothetical protein TERM 1232 1546330 - 1546273 - G 71 -4.5 -4.57482 | opp_overlap 1546329, overlap 1546277 CCATCCACAAAGAAA TCCAGGCCGCACTCGCCGATCGCGCAC GGCC GCTCGCGCTCGATCCATGCGGCCAGCA GCTCCAGATGCTCGG XOO1515 1546777 - 1546562 - | hypothetical protein TERM 1233 1547643 - 1547606 - g 78 -13.3 -3.54029 | GCGCATGAACGACAA GCCGGCCAGCGACCGTC TCCC GGTGGTCGATGGCCAGC TGGTGACCCAGATGG XOO1516 1546848 - 1547714 + | hypothetical protein TERM 1234 1547754 - 1547782 + F 83 -16.1 -2.95192 | opp_overlap 1547759, overlap 1547759 TAGCGTAGTGAATGA AAAAAGAGCCGGC AGT GCCGGCTCTTTTC GTTTGTGCCATTCCC TERM 1235 1547759 - 1547777 + F 100 -16 -4.61873 | opp_overlap 1547759, overlap 1547754 TAGTGAATGAAAAAA GAGCCGGC AGT GCCGGCTC TTTTCGTTTGTGCCA TERM 1236 1547777 - 1547759 - f 100 -16 -5.28481 | opp_overlap 1547759 1547754 TAGTGAATGAAAAAA GAGCCGGC AGT GCCGGCTC TTTTCGTTTGTGCCA TERM 1237 1548411 - 1548435 + G 75 -2.8 -4.72272 | gap 1, overlap 1548416 GGCGATCATCTGGGC GCATACGGACG ATGG CGTGCGTG-GC TTTTTGGTCGAGACC TERM 1238 1548556 - 1548574 + G 71 -13.8 -2.71712 | overlap 1548555 GTGCCGGAGCGGATG CGGCTGCC GGA GGCGGCCG GTTTGAAGGCGCCAC gcdH 1547860 - 1549035 + | glutaryl-CoA dehydrogenase XOO1518 1549050 - 1549256 + | hypothetical protein XOO4764 1549735 - 1550328 + | hypothetical protein gst 1551278 - 1551907 + | glutathione S-transferase TERM 1239 1552260 - 1552294 + G 81 -15.7 -2.94925 | TGGATCTGTCGCCGC TCGGCCACCAGCCGA TGCGT TCGGCTGATGGCCGC TATGTGCTGGCCTAT XOO1523 1552073 - 1554013 + | asparagine synthase TERM 1240 1554142 - 1554168 + F 71 -11.5 -3.53444 | gap 1 CACTGCATGCAGCTG CGGCGCAGCGGC CGGA GCCGG-GCGCCG TTTCACCAGCGCTGA XOO1524 1554230 - 1554784 + | hypothetical protein TERM 1241 1554822 - 1554795 - f 72 -14 -2.79796 | GCTGAGTTGACCACA GCGGCGCCGCGC TCGG GCGCGGCGTCCC GCGGGGCCTCGGGGA TERM 1242 1554937 - 1554967 + G 93 -18.4 -3.19921 | TATCCACAGAGTTGT GCATGGTCGTCGGC GTC GCCGATGACTATGC TTCCTGCCCTTGTCT dnaB 1554853 - 1556436 + | replicative DNA helicase TERM 1243 1557239 - 1557219 - g 88 -8.9 -4.62069 | overlap 1557220 CGGGTATCGCAAAAA CCGCGACCG CCC CGATCGCGT TGGCACCTCGCAACT TERM 1244 1557238 - 1557220 - g 73 -12.4 -3.3692 | overlap 1557219 GGGTATCGCAAAAAC CGCGACCG CCC CGATCGCG TTGGCACCTCGCAAC TERM 1245 1557356 - 1557377 + G 74 -10.9 -3.63805 | gap 1, opp_overlap 1557345 1557344 AAATCGATGGCTATA TC-CGCCAGC TGG GCTGGCGCGA TTTCGCCTATCACCT TERM 1246 1557705 - 1557723 + G 70 -11.6 -3.38201 | opp_overlap 1557677, overlap 1557703 1557706 GTGGGTGGCCGGCAC CGGCGCCG ATG CGGCGCCC TATTTCCGCGTGTTC TERM 1247 1557706 - 1557722 + G 74 -15.1 -2.62439 | opp_overlap 1557677, overlap 1557705 1557703 TGGGTGGCCGGCACC GGCGCCG ATG CGGCGCC CTATTTCCGCGTGTT phr 1556503 - 1557957 + | photolyase TERM 1248 1558053 - 1558084 + F 95 -11.4 -4.63932 | opp_overlap 1558016 GCCGATTCCGGGCAC CGGCCGCGCCCGCC TGGC GGTGAGCGCAGTCG TTTTGTTCGCCGCTC TERM 1249 1558114 - 1558153 + F 76 -8.7 -4.15106 | CCAGTCGCTGCTGAT CGATGCGCGTGTGC-CTGT TTCG ACAGCGCATGC-CGCGTCG TTTTGAGAGTTGGTG TERM 1250 1558267 - 1558289 + F 71 -5.5 -4.30576 | gap 1, overlap 1558266 1558267 TCCTGAATGGCATGC CCGCTGC-GC GCAT GCTGCGGTGG TTTTCATCATGCGGC XOO1527 1558374 - 1559099 + | OmpA family protein TERM 1251 1559183 - 1559164 - f 93 -15 -4.08216 | opp_overlap 1559164 TGATGTGCGGGAAAA CAGGCCGC GAAA GCGGCCTG TTTTTTAGTGCTGCA TERM 1252 1559164 - 1559183 + F 100 -15 -5.1861 | opp_overlap 1559164 TGATGTGCGGGAAAA CAGGCCGC GAAA GCGGCCTG TTTTTTAGTGCTGCA XOO1528 1559198 - 1559608 + | short chain dehydrogenase TERM 1253 1560587 - 1560561 - g 71 -7.3 -4.18494 | gap 1, overlap 1560562 TACTTGGATTCAAAA CGCCCCTCGAAG TCTT CTCCGAGGAG-G TCCTCAAAAGCGTTG XOO1529 1559648 - 1560616 + | hypothetical protein TERM 1254 1560814 - 1560843 + T 90 -17.9 -2.94099 | TGTCGTTCGCATGAT TCCGCGCAGCAGT CTCC ACTGCTGCGCGGC TCTGTGCTGCGCCGA fhuA 1563280 - 1560860 - | TonB-dependent receptor TERM 1255 1562681 - 1562716 + g 93 -4.7 -5.28176 | TGCAGTGTTGCCGCC GGTCAGG-CGCACGCTG CCTT CGG-GTGCATCCTGGCC TTTTTTCTGGATGAA TERM 1256 1563003 - 1563022 + g 77 -11.4 -3.71487 | ATCTTGAGCAGATCT GCGGTGCT CTGC GGCACCGC TTGTTGGATCTGCTC TERM 1257 1563082 - 1563063 - G 70 -2.1 -4.65895 | opp_overlap 1563065, overlap 1563065 GTGGTGATCGAAAAA CTGGC GTCGCGTTTG GCCAG GCCTTTGAAGCGCGC TERM 1258 1563598 - 1563581 - R 100 -14.1 -4.2679 | opp_overlap 1563581 CAACGCGCATGAAAA GGCCGCC CGAA GGCGGCC TCGCTTCCAGTCAGC TERM 1259 1563581 - 1563598 + r 71 -14.1 -2.53876 | opp_overlap 1563581 CAACGCGCATGAAAA GGCCGCC CGAA GGCGGCC TCGCTTCCAGTCAGC phuR 1565650 - 1565447 - | outer membrane hemin receptor XOO1533 1565869 - 1566279 + | hypothetical protein XOO1534 1566363 - 1566761 + | hypothetical protein TERM 1260 1566788 - 1566805 + T 100 -14.1 -5.79595 | opp_overlap 1566788 TTCGCGACACCAAAA CGCGGCG CTTG CGCCGCG TTTTTTGTTTTGCAG TERM 1261 1566805 - 1566788 - T 100 -14.1 -4.34402 | opp_overlap 1566788 TTCGCGACACCAAAA CGCGGCG CTTG CGCCGCG TTTTTTGTTTTGCAG XOO1535 1567934 - 1566894 - | alcohol dehydrogenase yadQ 1569452 - 1568007 - | chloride channel XOO4766 1570728 - 1570892 + | hypothetical protein ogt 1571687 - 1571142 - | 6-O-methylguanine-DNA methyltransferase ada 1573147 - 1571684 - | DNA methylation and regulatory protein XOO1540 1573159 - 1574202 + | hypothetical protein XOO1541 1574171 - 1574518 + | hypothetical protein XOO1542 1574597 - 1574851 + | hypothetical protein TERM 1262 1575369 - 1575316 - g 100 -23.9 -3.01712 | gap 1 GGCGTTCGCTCAACA GCCGCAGGCCGCCAGTCGCACCGC TAGCCCG GCGGCGCGGCCGGCA-CCTGCGGC GCCCGCAGGCCAGCC XOO1543 1575254 - 1575787 + | hypothetical protein XOO1544 1575813 - 1576214 + | inner membrane protein XOO1545 1576802 - 1576560 - | hypothetical protein TERM 1263 1576713 - 1576742 + g 75 -12.1 -3.54919 | overlap 1576739 GACGATCGCCTTGCC CTGGCCGCCACTG TCGG CAATGCCGGCCAG TTTGAGCAACTGGTT XOO1546 1577490 - 1576831 - | hypothetical protein TERM 1264 1577150 - 1577095 - G 90 -16.9 -3.38768 | opp_overlap 1577121 CCACAGTACCCAGAA CGCTACGCCCAGCCACGGCGCC-ACGC GCGT GCGCCAGCGCCGCAGCTGTGCA-AGCG CGCGCTGTGTCTGTA TERM 1265 1577393 - 1577429 + g 72 -6.5 -4.24342 | opp_overlap 1577405 GCACGTGCTGCGTGG CTGCGCATATCACCCAG CAG TTGGCTGGTGAGTGCAG TTTGTTGGTCCAGCC rfaY 1578062 - 1577520 - | RNA polymerase ECF-type sigma factor TERM 1266 1579320 - 1579332 + G 74 -10.5 -3.73402 | opp_overlap 1579320 ATGCGGTCAACGACA CGCGC GTG GCGCG TTTCATGACCCGTAT TERM 1267 1579447 - 1579420 - g 81 -11.2 -4.18506 | TGAGGCCGAAAACAA CGTGCCGGCGAT CGAT ATCGCCGCCGCG ATGGCCAAGCTGCTG deaD 1578167 - 1580071 + | ATP-dependent RNA helicase TERM 1268 1580079 - 1580115 + F 100 -22.3 -3.11812 | opp_overlap 1580072, overlap 1580082 GCGAGTAAGCGTGGC CGGCACCGCCTGCGGGG TCA CCCTGCAGGCGGTGTGG TTGCCTAGTATCGCT TERM 1269 1580082 - 1580112 + F 100 -24.8 -2.7674 | opp_overlap 1580072, overlap 1580079 AGTAAGCGTGGCCGG CACCGCCTGCGGGG TCA CCCTGCAGGCGGTG TGGTTGCCTAGTATC XOO1551 1580209 - 1582731 + | hypothetical protein XOO1552 1582881 - 1583603 + | pseudouridylate synthase XOO1554 1585728 - 1585117 - | hypothetical protein TERM 1270 1585206 - 1585192 - G 78 -4.2 -4.7497 | CGCACTGATGAAAAA CACGAA GAC CTCGCG TGGCTGACGTGCTGG XOO4768 1585950 - 1585852 - | hypothetical protein TERM 1271 1586377 - 1586339 - H 84 -10.8 -4.18197 | overlap 1586360 ATGCGCCACTGAAAA CGGCCAGCACGCAGCACA CGA CGCGCGGCGCGCCCACCG CAGCGGCAACCAAGA TERM 1272 1586604 - 1586638 + GH 81 -12 -3.91716 | overlap 1586564 CGCCATTTCGGCGGG CGCACCGTGTTCTGCG GGC CGATGGTCACGGTGCG TTGTTTCGAAGATAA TERM 1273 1586669 - 1586654 - gH 71 -10.4 -3.65812 | TTGTTTCGAAGATAA CTCGCG GATG CGCGAG CTGGCCGCCACGCCG menG 1586523 - 1587023 + | ribonuclease activity regulator protein RraA XOO1556 1586953 - 1588641 + | beta-lactamase TERM 1274 1588999 - 1589034 + G 71 -10.5 -3.5812 | overlap 1588994 1588998 AGACCATGGACGTGC TGTACGTGTTCGCGC AGTTCG GCGTGGGCATGTACA TGTTTCTGGTCGGTA TERM 1275 1589454 - 1589509 + G 72 -13.5 -3.08073 | gap 3, overlap 1589446 1589443 1589457 ATTTTCGTCGGCCGG C-ATCTGCTCAAGCGGCTGGCCGATCAT GTG GTGCCCGGCCAGCCGCT-GAGCA-ATAG TGTGTTGGCAGTGGT TERM 1276 1589457 - 1589506 + G 84 -17.9 -2.75528 | gap 1, overlap 1589446 1589443 1589454 TTCGTCGGCCGGCAT CTGCTCAAGCGGCTGGCCGATCAT GTG GTGCCCGGCCAGCCGCT-GAGCAA TAGTGTGTTGGCAGT yjl094C 1588788 - 1590053 + | cation:proton antiporter baeS 1591305 - 1590112 - | two-component system sensor protein baeR 1593635 - 1591302 - | two-component system regulatory protein TERM 1277 1593068 - 1593083 + Gg 87 -6 -5.09895 | overlap 1593041 CAATGCCGATATCGG CGCGGC GCGT GCGGCG TTTTTTCCGTCGATC ttgF 1591995 - 1593566 + | outer membrane channel protein XOO1561 1593586 - 1594422 + | hypothetical protein mexC 1594448 - 1595551 + | RND efflux membrane fusion protein acr 1595548 - 1598607 + | acriflavin resistance protein TERM 1278 1598707 - 1598693 - g 79 -5.6 -4.67173 | opp_overlap 1598706, overlap 1598702 1598705 CAAGGCAAAAAAGAA GGCCAC ACA GCAGCC GGTGCAGGCACCGGT XOO1564 1598673 - 1599263 + | hypothetical protein TERM 1279 1599452 - 1599472 + G 84 -8.9 -4.57474 | overlap 1599453 ATCGAGCGGGAGATG CCGCCACGC AGT GTGTGGCGC TTTTATCTGCATTAC TERM 1280 1599453 - 1599471 + G 73 -12.4 -3.33761 | overlap 1599452 TCGAGCGGGAGATGC CGCCACGC AGT GTGTGGCG CTTTTATCTGCATTA TERM 1281 1599666 - 1599679 + G 71 -4.5 -4.58283 | overlap 1599652 TGGCGGTGATCACGC TGGTC GCGC GGCCA TTTTTCACGGGCTTG TERM 1282 1600179 - 1600225 + G 80 -5 -4.77036 | gap 1, opp_overlap 1600155 1600179, overlap 1600180 AGCATCGCGAGCAGA CCCGGGTGACCACCGCCATGG ACACCG CCATCGCGGTGG-CGAACGGC TTTTTGATCGTGGGC bapA 1599395 - 1601227 + | ABC transporter ATP-binding protein XOO1566 1601881 - 1601303 - | transposase XOO1568 1602950 - 1601913 - | putative transposase XOO1569 1603209 - 1602994 - | transposase XOO4769 1605783 - 1605358 - | putative ISXo8 transposase XOO1572 1604285 - 1605520 + | transposase XOO1573 1607011 - 1605788 - | ISxac1 transposase XOO1574 1607287 - 1607027 - | putative ISXo8 transposase TERM 1283 1607534 - 1607549 + H 77 -2.6 -5.0133 | gap 1, overlap 1607534 1607535 CATATCCACTGGAGA T-GATGC TGC GCATCCA TTTTTTGCAGCAGTG TERM 1284 1608180 - 1608190 + H 78 -3.2 -5.06451 | CAGCCTGCATGCGAA GGTG GAA CATC TTTTTTCGGGTGATC TERM 1285 1608411 - 1608366 - H 72 -7.5 -4.14472 | opp_overlap 1608402 GCAATATCCCGAAAA CGCGCCGAAGGCGGAAAAA ATCAGTGG TTTGAGCGCCCTCAGCGCG GCGGATGTGGCTTGC TERM 1286 1608470 - 1608486 + H 71 -5 -4.4017 | opp_overlap 1608472, overlap 1608472 ATCCCTAGACAAAGC GAGCCG AATTA CGGCGC TTTTATAGCAATTCC TERM 1287 1609771 - 1609787 + G 73 -9.5 -3.82208 | opp_overlap 1609777 GAACACCCCTTGGCG CCAATAG AAA CTATTGG TTTCGCTATTTAATG TERM 1288 1610043 - 1610029 - g 89 -2.7 -5.41746 | AATTTTCCAAAAAAA CCCTC TTAGT GTGGG ATACAGAACTCAGAC XOO1577 1608522 - 1613012 + | RhsD protein precursor TERM 1289 1613062 - 1613048 - f 75 -4.2 -4.78237 | overlap 1613043 GATGCCATAAGAAAA GCTTTC GCA GAACGC CCAAAACCTTCGACA TERM 1290 1614251 - 1614262 + G 76 -2.2 -4.8622 | overlap 1614249 GACGAGTTGCAGAGC TGCG AGGC TGCA TTTTTCATTGCCGCC XOO1578 1613552 - 1614520 + | putative transposase XOO1579 1614831 - 1614733 - | putative ISXo8 transposase XOO4770 1614785 - 1615120 + | putative ISXo8 transposase rhsD 1617130 - 1615622 - | RhsD protein TERM 1291 1618675 - 1618649 - g 71 -7.3 -4.18494 | gap 1, overlap 1618650 TACTTGGATTCAAAA CGCCCCTCGAAG TCTT CTCCGAGGAG-G TCCTCAACAGCGTTG XOO1581 1617736 - 1618704 + | transposase XOO1582 1620932 - 1619550 - | putative ISXo8 transposase coaE 1621548 - 1620940 - | dephospho-CoA kinase pilD 1622425 - 1621562 - | type IV pre-pilin leader peptidase pilC 1623637 - 1622432 - | fimbrial assembly protein TERM 1292 1623128 - 1623146 + g 78 -3 -4.87626 | CACTGCAACCACCAT GGCAGGGT AGA ACAGTGCC TTTTTGATCTTGCCC pilE 1623965 - 1624471 + | pilin TERM 1293 1624498 - 1624514 + F 100 -15.1 -6.22802 | GAGTAGCTTGTAGAG GCCCCGC GAC GCGGGGC TTTTTTTTTCTGGAG XOO1587 1624537 - 1626195 + | putative integral membrane protein TERM 1294 1626307 - 1626326 + F 82 -2.8 -5.12707 | gap 1 GGCATTGATCTACCA GGTGA-GCT GGC AGCGTCTCC TTTTTTCGGGTTTGG XOO1588 1626805 - 1628331 + | putative integral membrane protein pilB 1628312 - 1630099 + | pilus biogenesis protein fic 1630362 - 1630108 - | cell filamentation protein Fic TERM 1295 1630608 - 1630595 - R 76 -9.5 -4.08216 | GCAGTTGCTGCAAAA GCGGC TTCA GCCGC CTCCAACATATCCTG pilR 1632409 - 1630958 - | two-component system regulatory protein TERM 1296 1631063 - 1631083 + g 77 -11.1 -3.70773 | TTCTTCCAGCGCTTT CTGGATCGC GGC GCGTTCCAG TTGTTCGATGTAGGA TERM 1297 1631390 - 1631434 + g 82 -15.6 -3.08173 | gap 1, overlap 1631407 GATGGCAGCGGCCAG CTGCGGCAAGTCGCCGCCGCG TTCG CGCAGCGGCGGCACGC-GCAG TTCGATCACGTTGAT TERM 1298 1631934 - 1631975 + g 71 -12.9 -2.96329 | overlap 1631931 GAGTCGCCGAGCAGG CGGCTGGCCTGTTCCGGTG GCGG CGGCGGAGCAGGGCGGTCG TGGTTGTTCAATTCC pilS 1634293 - 1632680 - | two-component system sensor protein TERM 1299 1633374 - 1633340 - G 89 -16.4 -3.28924 | overlap 1633358 CAGGCTGGCCGAGAA GCGCCCCATCGCCGAC AAC GTCAGCGATTCGGCGC GACGCGACACCACGG TERM 1300 1634262 - 1634235 - G 93 -4 -5.39755 | overlap 1634237 TACAACGAGAAAAAA TACAGCTCACGC TGCG GCGCGGACTGGA TGCGGGCGATGAACG TERM 1301 1634260 - 1634237 - G 72 -6.6 -4.31563 | overlap 1634235 CAACGAGAAAAAATA CAGCTCACGC TGCG GCGCGGACTG GATGCGGGCGATGAA TERM 1302 1634477 - 1634504 + H 76 -8.4 -4.19735 | gap 1, overlap 1634465 CATGACGTGCCGCTC CGGCGGTCTGCGT TGC ACGCAG-CGGTCG TTTCCTTTTCCCACG sucC 1634527 - 1635696 + | succinyl-CoA synthetase subunit beta sucD 1635721 - 1636596 + | succinyl-CoA synthetase subunit alpha TERM 1303 1636615 - 1636646 + F 100 -18.8 -4.79826 | opp_overlap 1636623, overlap 1636616 TTACCAGTATGGTGC CGCAGAAAGCCGCC TTCG GGCGGCTTTCTGCA TTTTTGCTCATGTCT TERM 1304 1636616 - 1636645 + F 100 -22.3 -3.46811 | opp_overlap 1636623, overlap 1636615 TACCAGTATGGTGCC GCAGAAAGCCGCC TTCG GGCGGCTTTCTGC ATTTTTGCTCATGTC TERM 1305 1636638 - 1636623 - f 81 -11.8 -3.85817 | opp_overlap 1636616 1636615 ATGGTGCCGCAGAAA GCCGCC TTCG GGCGGC TTTCTGCATTTTTGC nadE 1637641 - 1639299 + | NAD synthetase TERM 1306 1639428 - 1639413 - T 100 -10.4 -5.4505 | opp_overlap 1639399 1639413 CGCCGCAAGAAAAAA GAGGCC TTGC GGCCTC TTTTGGTGATGCGCT TERM 1307 1639413 - 1639428 + T 85 -10.4 -4.30844 | opp_overlap 1639413, overlap 1639399 CGCCGCAAGAAAAAA GAGGCC TTGC GGCCTC TTTTGGTGATGCGCT comL 1640338 - 1639457 - | competence lipoprotein TERM 1308 1641090 - 1641046 - g 70 -14.4 -2.53213 | gap 2, overlap 1641072 CAATGCCCCAATCGA CCGTCACCCGCGCGACCGCC TGAAGAT GGCGGT-GCGCGA-CGACGG TCGCGATGCAGTCAC TERM 1309 1641225 - 1641209 - g 77 -12.3 -3.60098 | ATGGCGCACCTGAAA TCGCCGA TCG TCGGCGA CCCGCTGTACGGCGG rluD 1640447 - 1641454 + | ribosomal large subunit pseudouridine synthase D XOO1598 1641462 - 1642268 + | hypothetical protein XOO1599 1642289 - 1642795 + | hypothetical protein XOO1600 1642770 - 1643150 + | hypothetical protein XOO4771 1643074 - 1643175 + | hypothetical protein ostA 1644767 - 1643400 - | trehalose-6-phosphate synthase XOO1602 1646617 - 1644764 - | hypothetical protein TERM 1310 1646437 - 1646426 - GR 70 -7.2 -4.10161 | overlap 1646427 GAGCAGCGTGCAAAA GGCG GGGT CGCC GTCGAATGCCGGCAG ostB 1647351 - 1646587 - | trehalose-6-phosphate phosphatase TERM 1311 1648551 - 1648572 + r 83 -15.9 -3.19192 | CAGCGCGGTTGTGCC GGCACCGTG CCAT CACGGTGCC TTACCTTGGCTACGC bfeA 1651197 - 1648663 - | ferric enterobactin receptor TERM 1312 1648985 - 1649024 + g 79 -10.6 -4.15044 | gap 1, overlap 1648989 CAGTTGGCGGCGAGC GCTGCACGCGTGCGCGGCG CGG CGCCG-GTGAGCGTGTTGC TTTCTTCCACGCCGA TERM 1313 1648989 - 1649020 + g 74 -10.8 -3.68738 | gap 1, overlap 1648985 TGGCGGCGAGCGCTG CACGCGTGCGCGGCG CGG CGCCG-GTGAGCGTG TTGCTTTCTTCCACG TERM 1314 1650610 - 1650639 + g 72 -13.5 -3.08173 | overlap 1650631 AACCGCATCCGAGCC GTACTGCGCGCCG GCAC CGTCGCGCAGCAC TTCGATGCGCTTGAT TERM 1315 1651439 - 1651483 + G 73 -9.7 -3.82202 | overlap 1651440 1651443 GCCAGCCTGCAAGGC GACGCCGCGCGGCCAGCGGCG GCG CGCGGTTGGGTGCGCAGCGAG TTGTATTTCGGCGTG XOO1605 1651280 - 1651807 + | hypothetical protein XOO1606 1653150 - 1651903 - | hypothetical protein XOO1607 1653426 - 1655027 + | hypothetical protein XOO1608 1655179 - 1655325 + | transposase XOO1609 1656594 - 1655332 - | hypothetical protein TERM 1316 1655512 - 1655558 + g 82 -4.3 -5.00616 | gap 2, overlap 1655513 1655520 GTCGCCGGTGACCTG ATG-CGGGT-CGCCGCTGTGGGC GAT GCCCAGTGCGGCGTATTCGGCGG TTTTTTCCGGGCCGC TERM 1317 1655520 - 1655548 + g 82 -15.9 -3.0641 | overlap 1655513 1655512 TGACCTGATGCGGGT CGCCGCTGTGGGC GAT GCCCAGTGCGGCG TATTCGGCGGTTTTT ate1 1657372 - 1656617 - | arginyl-tRNA-protein transferase XOO1610 1657592 - 1658173 + | hypothetical protein TERM 1318 1658282 - 1658229 - T 76 -11.5 -3.69395 | gap 1, opp_overlap 1658238 1658243 1658259, overlap 1658232 TGCAGTACGTAACAA GGAGCGGATCGACAGCGCCCTCTCGC CTG GCGGGAGGGCGCTTGCGTTT-GCGCC AGACGCTGGGCGCAG TERM 1319 1658281 - 1658232 - T 70 -12.7 -2.95139 | gap 1, opp_overlap 1658238 1658243 1658259, overlap 1658229 AGTACGTAACAAGGA GCG-GATCGACAGCGCCCTCTCGC CTG GCGGGAGGGCGCTTGCGTTTGCGC CAGACGCTGGGCGCA TERM 1320 1658238 - 1658274 + T 100 -20.1 -3.53091 | opp_overlap 1658232 1658229, overlap 1658243 1658259 TAACAAGGAGCGGAT CGACAGCGCCCTCTCGC CTG GCGGGAGGGCGCTTGCG TTTGCGCCAGACGCT TERM 1321 1658243 - 1658269 + T 100 -21.6 -3.27525 | opp_overlap 1658232 1658229, overlap 1658238 1658259 AGGAGCGGATCGACA GCGCCCTCTCGC CTG GCGGGAGGGCGC TTGCGTTTGCGCCAG XOO1612 1658792 - 1658307 - | hypothetical protein rfaY 1659796 - 1659017 - | RNA polymerase sigma factor TERM 1322 1659577 - 1659533 - G 70 -13.6 -2.52464 | GGTCTGCCGAAGCCA GGGCAGGCAGCTGGC-CGGCTG ATG CAGCTGCGCCAGCCGC-TGCCA GGCACGCAGGAAGGC TERM 1323 1659610 - 1659657 + g 73 -12.6 -3.30651 | overlap 1659608 CCTGGGCGATGTCTT CGCTGGCTGCGATGTCGCGGGT GATC GCCAGCGACATCGGGGGCACCG TGTTCTGGTATGCAA pthX 1660414 - 1659872 - | pathogenicity-related protein tesB 1661628 - 1660603 - | acyl-CoA thiolesterase II TERM 1324 1660729 - 1660705 - GR 72 -4.2 -4.56597 | gap 2, overlap 1660706 1660707 GTCGCGGGTGAAAAA CTGCCCGCGCGC CAG GC-CGCGCGC-G CCTTGCGCGGTGGGG XOO1616 1662349 - 1661579 - | hypothetical protein TERM 1325 1662507 - 1662486 - g 78 -4.3 -4.74103 | opp_overlap 1662490 1662501, overlap 1662487 GCCCGAATTCAAAAA TGGCTGGAT CCGC ATCCCGCCG CCCGGGGGCATGGCG XOO1617 1662373 - 1662837 + | hypothetical protein TERM 1326 1662905 - 1662882 - T 100 -11.6 -4.8622 | opp_overlap 1662879 1662882 GCGCGCAACCAAAAA CGGCGGCTCC CGAA AGCGCCGCCG TCCGTTTTCAAGGTT TERM 1327 1662984 - 1662954 - T 71 -13.9 -2.64155 | opp_overlap 1662962, overlap 1662951 1662950 GCTCGCTGAAATTCA GCTGCTGGCCGCG CGTAC CGCGTCCGGCAGC GCCGCGGTCTTGCCG XOO1618 1663355 - 1662951 - | hypothetical protein TERM 1328 1663464 - 1663486 + H 70 -7.7 -4.07568 | gap 1 GGCTTGTTGGCCATT GC-CGCCGGA CGCG TCTGGCGCGC TTTTACCGACGGCAA TERM 1329 1665011 - 1664993 - H 86 -7.4 -4.68424 | overlap 1664995 CAAGCCACGGAAAAA GCTCAACG CCT CGTTGACC GGCAGTACCACCAGT TERM 1330 1665626 - 1665578 - H 73 -6.7 -4.26076 | gap 2, opp_overlap 1665579, overlap 1665580 GTACTTGGACGAAAA CA-GGTG-CGGTGCGGCCGCCGG GTCGT CCAACGATTGCACCGCCACCATG CCTTCGCCCAGCTTG TERM 1331 1665623 - 1665580 - H 71 -9.5 -3.7331 | gap 1, opp_overlap 1665579, overlap 1665578 ACTTGGACGAAAACA GGTG-CGGTGCGGCCGCCGG GTCGT CCAACGATTGCACCGCCACC ATGCCTTCGCCCAGC rplU 1666618 - 1666938 + | 50S ribosomal protein L21 TERM 1332 1666983 - 1666965 - g 79 -2.2 -4.9792 | overlap 1666967 CATGGCACATAAAAA GGGCGTAG GTT CCTCGCGC AACGGTCGCGATTCG rpmA 1666951 - 1667211 + | 50S ribosomal protein L27 TERM 1333 1667265 - 1667294 + F 76 -12.9 -3.53012 | opp_overlap 1667271 1667272, overlap 1667272 GCTTTGCGAACGAGA CGGAAAGCCCCGC TTCG GCGGGGTTTTTTG TTTGAGAGCCGGGAG TERM 1334 1667272 - 1667287 + F 100 -11.8 -5.63517 | opp_overlap 1667271 1667272, overlap 1667265 GAACGAGACGGAAAG CCCCGC TTCG GCGGGG TTTTTTGTTTGAGAG obgE 1667444 - 1668496 + | GTPase ObgE TERM 1335 1668515 - 1668542 + T 71 -12.8 -3.06696 | opp_overlap 1668521, overlap 1668521 CAGGCGCAGGCACAA AAAAAACCCGGC CGAG GCCGGGTTTTTC TGTATTGCCGGCAGC TERM 1336 1668536 - 1668521 - T 100 -11.8 -5.96219 | opp_overlap 1668515 1668521 CAGGCACAAAAAAAA CCCGGC CGAG GCCGGG TTTTTCTGTATTGCC TERM 1337 1668521 - 1668536 + T 100 -11.8 -5.10064 | opp_overlap 1668521, overlap 1668515 CAGGCACAAAAAAAA CCCGGC CGAG GCCGGG TTTTTCTGTATTGCC rpsT 1668857 - 1668588 - | 30S ribosomal protein S20 mviN 1668959 - 1670578 + | virulence factor ribF 1670597 - 1671793 + | bifunctional riboflavin kinase/FMN adenylyltransferase TERM 1338 1673647 - 1673608 - g 81 -13.6 -3.48276 | gap 1 GGCGGCGCCATACAA GCAGTGCCTCACCCACGGC TTC ACCGTGGACGAG-CACGGC CGCAAGATGTCCAAG ileS 1671800 - 1674631 + | isoleucyl-tRNA synthetase lspA 1674826 - 1675446 + | lipoprotein signal peptidase ispH 1675535 - 1676485 + | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase TERM 1339 1676640 - 1676676 + F 83 -11.6 -4.08767 | gap 2, opp_overlap 1676646 1676647, overlap 1676647 1676671 ATTTCCGGCACCACG CGAAAAGCCGGGTCGGCC TCT GGCCGGCCCGG-TTG-CG TTTTGAGGAGCTGAA TERM 1340 1676672 - 1676646 - f 100 -15 -4.15565 | opp_overlap 1676640 1676647 1676671, overlap 1676647 GGCACCACGCGAAAA GCCGGGTCGGCC TCT GGCCGGCCCGGT TGCGTTTTGAGGAGC TERM 1341 1676671 - 1676647 - f 90 -18.5 -3.09018 | opp_overlap 1676640 1676647, overlap 1676646 GCACCACGCGAAAAG CCGGGTCGGCC TCT GGCCGGCCCGG TTGCGTTTTGAGGAG TERM 1342 1676647 - 1676671 + F 95 -20.7 -3.36823 | opp_overlap 1676647 1676646, overlap 1676640 GCACCACGCGAAAAG CCGGGTCGGCC TCT GGCCGGCCCGG TTGCGTTTTGAGGAG TERM 1343 1677237 - 1677223 - g 72 -7 -4.21607 | overlap 1677206 1677203 CGCATCCAACACAAA GGCGCG TTA CGAGCC GGATTGGTCGCACTC cyoA 1676999 - 1677934 + | cytochrome O ubiquinol oxidase subunit II cyoB 1677913 - 1679934 + | cytochrome O ubiquinol oxidase subunit I TERM 1344 1680329 - 1680362 + G 74 -10.9 -3.63991 | gap 1, opp_overlap 1680328 1680327, overlap 1680328 1680327 CCTGATCCATGAAGG CGCCGGACCGGGTCGC AGC GCGTTCCTGTC-GGCG TTCTTCACCCTGGTG cyoC 1679931 - 1680563 + | cytochrome O ubiquinol oxidase subunit III cyoD 1680563 - 1680898 + | cytochrome O ubiquinol oxidase subunit IV TERM 1345 1680937 - 1680958 + F 88 -8.7 -4.71061 | opp_overlap 1680937 1680935 1680938, overlap 1680938 CAATGTTGAAGAAGA TGTCGCCAA GTGA TTGGCGACC TTTTTACGTGTCAAT TERM 1346 1680938 - 1680957 + F 74 -12.2 -3.41913 | opp_overlap 1680938 1680937 1680935, overlap 1680937 AATGTTGAAGAAGAT GTCGCCAA GTGA TTGGCGAC CTTTTTACGTGTCAA TERM 1347 1681629 - 1681606 - g 72 -11 -3.53444 | gap 1, opp_overlap 1681613, overlap 1681610 CCACCGCGCTGGAAA CCG-ATCGCCG CGT CGGCGACACGG TGAGCTTCAAGCCGA XOO1633 1681248 - 1682945 + | hypothetical protein TERM 1348 1683011 - 1683048 + F 70 -10.6 -3.59979 | gap 1 CGCTTGAGGGATGGT CAC-ACCGCCACTTCCT GAATA GGGAGGTGGCGGTCGCG TTTCCAATCAGGCAA vrgS 1683146 - 1685416 + | hypothetical protein TERM 1349 1685533 - 1685568 + G 84 -8.2 -4.56597 | gap 1, overlap 1685531 CGGTTGTTTGTCTGG CGTGTGCCGGCCAACGC CTT GCGTCTGCTGGCA-GCG TTTTTCGAGGCACAG XOO1635 1685410 - 1687059 + | hypothetical protein XOO1636 1687203 - 1691342 + | hypothetical protein XOO1637 1691386 - 1692423 + | putative transposase XOO1638 1693525 - 1696419 + | hypothetical protein XOO4774 1697689 - 1697817 + | hypothetical protein XOO1639 1697836 - 1700841 + | hypothetical protein TERM 1350 1701013 - 1701000 - g 76 -2.3 -4.85782 | overlap 1701001 1701002 CGCTGCAAAAACAAA TGGTG AGCG CACCG GCGCGTCGTGCGCTG TERM 1351 1701438 - 1701403 - g 75 -10.5 -3.91911 | gap 1 GGCAGGGCAATCAAA TGCCTGGTG-ATCGTG GACGA CGCGACACACCAGGCA GTCGCCATCGAGGTG TERM 1352 1701790 - 1701773 - g 78 -4 -4.79949 | overlap 1701774 1701785 GCCCCAAAAAAACAA TCGGCG GAATGA CGCCGG CGGCCTATGCCCAGC XOO1640 1700857 - 1701843 + | IS1404 transposase XOO1641 1703468 - 1701840 - | hypothetical protein TERM 1353 1703638 - 1703628 - R 80 -4.6 -4.82901 | CGGTGTCGATAAAAA CCGG GGC CCAG ATGCACGGCCTGCCA mutS 1706346 - 1703725 - | DNA mismatch repair protein TERM 1354 1704850 - 1704861 + g 72 -3.6 -4.59773 | overlap 1704837 1704839 CTGCCGCCGGCTATA GTGC AGCG GCGC TTTTTCGGCCTGGCC TERM 1355 1705255 - 1705223 - G 88 -9.8 -4.62471 | gap 2, overlap 1705224 CGCAAGGTGGAAAAA TCGCGCGGC-C-GCGC CGA GCGCAGCGCCACGCGG GTGAGGATGCGTTCC TERM 1356 1705254 - 1705224 - G 77 -13.3 -3.37 | gap 2, overlap 1705223 GCAAGGTGGAAAAAT CGCGCGGC-C-GCGC CGA GCGCAGCGCCACGCG GGTGAGGATGCGTTC TERM 1357 1706606 - 1706582 - R 70 -10.6 -3.53811 | overlap 1706571 CTGAGCGTGGCCAAA GGCCCCGTGG AGGGA CCGCAGGGCC GGATCACCATCGCCC TERM 1358 1706979 - 1707007 + r 72 -7.4 -4.18197 | gap 1, overlap 1706980 TGCAACGCTGTTGAG GGCCTCCTCGGAG AAGA CTTCGAGG-GGCG TTTTGAATCCGACGT XOO1643 1707855 - 1707049 - | IS1404 transposase TERM 1359 1707102 - 1707119 + g 78 -4 -4.79949 | overlap 1707097 1707103 GCTGGGCATAGGCCG CCGGCG TCATTC CGCCGA TTGTTTTTTTGGGGC TERM 1360 1707572 - 1707595 + g 75 -4.5 -4.59773 | gap 1, opp_overlap 1707571 GTGGGCCGCAGCAAC GGCGCACGCT CGCCT AGCG-GCACC TTTTTACGCGTGCGG XOO1645 1708156 - 1707887 - | IS1404 transposase XOO1646 1708175 - 1708615 + | putative ISXo8 transposase XOO1647 1708644 - 1708871 + | putative ISXo8 transposase radA 1710643 - 1709252 - | DNA repair protein RadA XOO1649 1711219 - 1710728 - | IS1404 transposase TERM 1361 1710781 - 1710798 + gr 78 -4 -4.79949 | overlap 1710776 1710782 GCTGGGCATAGGCCG CCGGCG TCATTC CGCCGA TTGTTTTTTTGGGGC XOO1650 1711713 - 1711042 - | IS1404 transposase XOO4777 1711829 - 1711566 - | IS1404 transposase TERM 1362 1713289 - 1713243 - g 72 -10.9 -3.47442 | AAGAACATGAAGCAA GCGCGTGAGCCG-ACGGCGATCT CGC AGATCGCCGCGCAGATC-CGTGC AGCGACGCCCGAGCA XOO4778 1712034 - 1713590 + | hypothetical protein TERM 1363 1713792 - 1713769 - T 83 -15.2 -3.12668 | opp_overlap 1713773 GACGCCGATACGCAA GGCGCGGCGC CATG GCGCTGCGCC CTGATGACGGCGCAC plcN 1715005 - 1713854 - | phospholipase C TERM 1364 1716054 - 1716028 - R 90 -18.1 -3.06796 | overlap 1716044 CCGCATCCGAGGGAA TGCTCGCACCG AGACA CGGTGCGAGCA GCGCATAGCATCGCA ycaD 1717412 - 1716174 - | transmembrane transport protein TERM 1365 1716563 - 1716540 - G 89 -2.4 -5.4251 | gap 1 GCCATAGACAAAAAA CAGCACGAACA GCA CGGTCGT-CTG CGTCTGCACCATCGG TERM 1366 1718033 - 1718019 - g 74 -10 -3.72576 | GCGGCTGGTACGAAA CCGACT TCA AGTCGG CCGGCGAGAAAAAGA XOO1654 1717679 - 1718146 + | hypothetical protein TERM 1367 1718634 - 1718600 - T 70 -10 -3.64703 | overlap 1718601 TGCGCCTCACCGAAA CGCGCAGGCCGA ATCCCACCACG CCGGCCTGCGCA ACCAGCGCATCAGCG XOO1655 1719420 - 1718644 - | hypothetical protein aspS 1719500 - 1721344 + | aspartyl-tRNA synthetase TERM 1368 1721384 - 1721356 - f 86 -16 -3.14931 | opp_overlap 1721357, overlap 1721359 CTGATCCGCGATCAA GCACGGCCACGC CTAGC GCGTGGCCGTGT TATTTATGCGCGGCG TERM 1369 1721357 - 1721383 + F 100 -19.5 -4.06419 | opp_overlap 1721356 1721359 TGATCCGCGATCAAG CACGGCCACGC CTAGC GCGTGGCCGTG TTATTTATGCGCGGC TERM 1370 1721381 - 1721359 - f 81 -16.3 -2.78018 | opp_overlap 1721357, overlap 1721356 ATCCGCGATCAAGCA CGGCCACGC CTAGC GCGTGGCCG TGTTATTTATGCGCG XOO1657 1721856 - 1722383 + | acetyltransferase TERM 1371 1723107 - 1723148 + G 71 -10 -3.68351 | opp_overlap 1723085 CTGTTGCGCTCGCCC GAGGCCGCCGCACAGG CGCTGGCCTT CCTGCGCTGCGGCCGC TTTCGGTCGTGAACA XOO1658 1722561 - 1723160 + | hypothetical protein XOO1659 1723250 - 1723978 + | hypothetical protein ruvC 1724093 - 1724617 + | Holliday junction resolvase ruvA 1724775 - 1725359 + | Holliday junction DNA helicase motor protein TERM 1372 1727397 - 1727409 + G 71 -10.5 -3.65314 | GCATCGCAACGCCGC CCCGG CGA CCGGG TTCTTCCGCATTCCC kup 1725559 - 1727466 + | potassium uptake protein ruvB 1727595 - 1728632 + | Holliday junction DNA helicase B XOO1664 1728685 - 1729143 + | hypothetical protein tolQ 1729155 - 1729934 + | hypothetical protein tolR 1729959 - 1730540 + | hypothetical protein TERM 1373 1731215 - 1731195 - g 72 -6.7 -4.25104 | GCTGGCCGAGCAAAA GCTGCGCCA GGT TGCCGCCGC ACGTGCGCAGCAGTC tolA 1730530 - 1731570 + | hypothetical protein tolB 1731764 - 1733149 + | translocation protein TolB ompP6 1733180 - 1733725 + | outer membrane protein P6 precursor XOO1670 1733732 - 1734550 + | hypothetical protein TERM 1374 1735195 - 1735172 - g 80 -13.8 -3.39521 | overlap 1735167 CCGAGCAAAAGTGAA GTCGGCCCGC GACA GCTGGCCGAC TGGATCGTGGCCGAC XOO1671 1734644 - 1735276 + | radical activating enzyme XOO1673 1735396 - 1736631 + | transposase TERM 1375 1736661 - 1736634 - f 75 -12.2 -3.6215 | gap 1, opp_overlap 1736633 1736619 1736634 1736643, overlap 1736627 1736639 GCAACCCACTTGAAA TTCAAGAGAGCCA AAG TGGCTCTCT-GAA AATTTGAGTGGGTAG TERM 1376 1736657 - 1736639 - f 74 -13.2 -3.28497 | opp_overlap 1736634 1736633 1736619 1736643, overlap 1736634 CCACTTGAAATTCAA GAGAGCCA AAG TGGCTCTC TGAAAATTTGAGTGG XOO1675 1736713 - 1737948 + | transposase XOO1677 1738789 - 1738343 - | transposase TERM 1377 1738872 - 1738834 - R 91 -16.2 -3.55203 | overlap 1738861 AAAACCCCGTTCAAA CCTCCAGTACCATGTT TGCGGGC AACATGGTGCTGGAGG GCGTTGAGGAACGCG XOO1678 1740205 - 1738829 - | IS1478 transposase TERM 1378 1740287 - 1740275 - H 91 -4.7 -5.31275 | overlap 1740277 GTCCACGAGAAAAAA CGGGC AGC GACCG AACGCATAGCACCGG TERM 1379 1740381 - 1740350 - H 95 -11.4 -4.63932 | GAGCGGCTAACAAAA CGACTGCGCTCACC GCTA GGCGGGCGCGGCCG GTGCTCGGAATCGGC exsB 1740584 - 1741258 + | transcriptional regulator TERM 1380 1741402 - 1741416 + T 100 -12.8 -5.28176 | opp_overlap 1741399 1741395 ATCAGTAACTTAGAC GGCGCC GCA GGCGCC TTTTTTGTGCATCCG TERM 1381 1741480 - 1741453 - T 81 -10.6 -4.17048 | gap 1, opp_overlap 1741452, overlap 1741454 TTGCCGGGAAAATAA GTGGCCG-GGAAC GCG GTTCCACGGCCAA GTAATTGGAGCAAAG TERM 1382 1741479 - 1741454 - T 75 -14.1 -3.09908 | gap 1, opp_overlap 1741452, overlap 1741453 TGCCGGGAAAATAAG TGGCCG-GGAAC GCG GTTCCACGGCCA AGTAATTGGAGCAAA int 1742687 - 1741503 - | phage-related integrase XOO1681 1742947 - 1742687 - | hypothetical protein XOO1682 1743894 - 1743619 - | hypothetical protein XOO1683 1744466 - 1744056 - | hypothetical protein TERM 1383 1744532 - 1744496 - R 90 -18.1 -3.05384 | gap 1 GCTTCGTTGATGGAA GGTCCAG-GGGCGGTG TTGACG CACCGCCCGCCGGACC CGCTGGTACAGGTCA XOO1684 1744970 - 1744692 - | hypothetical protein TERM 1384 1745144 - 1745164 + r 74 -10.4 -3.71487 | gap 1 ATAATGGGTGACTTG GCGCGCCGC AGAC GCGG-GCGC TTCTTGGGTGTGGTA XOO1685 1748190 - 1745494 - | hypothetical protein TERM 1385 1746086 - 1746098 + g 71 -10.5 -3.68529 | GCGTTGAGGTTGTCG GCCGC GAT GCGGC TTTCGGTGGTGACCT XOO1686 1748412 - 1748200 - | hypothetical protein XOO1687 1749024 - 1748698 - | hypothetical protein XOO1688 1749350 - 1749787 + | hypothetical protein TERM 1386 1749906 - 1749884 - T 100 -11.2 -5.8187 | opp_overlap 1749884 TAGGCAACAAAAAAA GCCGCCGGCC TAT AACCGGCGAC TTTCGTTAAGGTGTC TERM 1387 1750469 - 1750434 - T 78 -15.6 -2.78463 | opp_overlap 1750445, overlap 1750445 1750448 AGCGGTTGCAGTAGA GGAGGTGAAAAGCATC AGGC GATGCTTTCCAACTCC AGCGATGTTGTAAAG XOO1689 1751434 - 1750448 - | phage-related tail protein XOO1690 1751832 - 1751431 - | phage-related tail protein XOO1691 1754715 - 1751845 - | phage-related tail protein TERM 1388 1754134 - 1754120 - G 77 -12.8 -3.42056 | ATCGGCAATGCAGAA GCGCGC AAG GCGCGC TGACCGGCAAATGCC XOO1692 1754861 - 1754748 - | hypothetical protein XOO1693 1755172 - 1754870 - | phage-related tail protein TERM 1389 1754953 - 1754920 - G 100 -5.9 -5.7946 | gap 1 TCGTCAAGAAAAAAA GCTGCACCTCCTGGCC GAG GGCAAGCAGGT-CGGC CGGATCCATCGCATT XOO1694 1755727 - 1755218 - | phage-related tail protein XOO1695 1756924 - 1755758 - | phage-related tail protein XOO1696 1757295 - 1756936 - | phage-related baseplate protein XOO1697 1757855 - 1757292 - | phage-related baseplate protein TERM 1390 1757789 - 1757826 + g 74 -12.7 -3.18264 | GGCATCGCGCGGTGG CGAGATTCACCTCGGCA ACCG TGCCGAGGCGAATGGCG TTACTCAGTGCGGAG XOO4779 1758290 - 1757916 - | hypothetical protein XOO1698 1760007 - 1758502 - | hypothetical protein XOO1699 1760586 - 1760017 - | phage-related tail protein XOO1700 1761508 - 1760555 - | phage-related baseplate assembly protein XOO1701 1762418 - 1761576 - | hypothetical protein TERM 1391 1762771 - 1762787 + r 72 -2.3 -4.75174 | overlap 1762773 GGGGTGAGTTGATCG TTTCATT AAA GATGAGA TTTTTAGCTTAAATG XOO1702 1763682 - 1763236 - | phage-related tail protein TERM 1392 1763571 - 1763621 + g 76 -14.1 -3.05384 | gap 2, overlap 1763608 CGATGCGCTGGCTTT GCGAGCGCCGCA-GCT-CCGTGC CGATCTT GCGCGCCAGTGTGCGGCGCTCGC TTGGCTCCAAACGCG XOO1703 1764122 - 1763670 - | phage-related tail protein XOO1704 1764574 - 1764086 - | hypothetical protein lys 1765215 - 1764574 - | phage-related lytic enzyme XOO1706 1765502 - 1765212 - | hypothetical protein XOO1707 1765836 - 1765480 - | hypothetical protein XOO1708 1766050 - 1765841 - | phage-related tail protein XOO1709 1766427 - 1766050 - | phage-related capsid completion protein XOO1710 1767336 - 1766617 - | phage-related terminase XOO1712 1768356 - 1767340 - | phage-related major capsid protein XOO1713 1769245 - 1768403 - | phage-related capsid scaffold protein TERM 1393 1768717 - 1768737 + g 72 -8.2 -4.15044 | CCGAGCCTTCGCTGA CCTCGCTG AATTC CAGCGTGG TTTCTTCGGCGACGG TERM 1394 1769335 - 1769316 - H 86 -7.8 -4.71828 | opp_overlap 1769319, overlap 1769320 AGCGCAGCAACAAAA CCACCGTG TAAA CAAGGTGG TTACGCGTCGCTCAA TERM 1395 1770115 - 1770101 - g 70 -11.4 -3.33696 | opp_overlap 1770087 1770087 CTTCCTGGGAACCAA TGCGCG CAC CGCGCA GGGTTACCACGGCAA XOO1714 1769367 - 1771151 + | phage-related terminase XOO1715 1771148 - 1772173 + | phage-related capsid packaging protein TERM 1396 1772383 - 1772370 - g 78 -3.7 -4.77036 | TCTCACCATGAAAAA CCAGC TCCT GCAGG GCGACGCCCTGACCA XOO1717 1772362 - 1773063 + | site-specific DNA-methyltransferase TERM 1397 1773067 - 1773095 + T 100 -11.8 -4.4891 | gap 1, overlap 1773070 GCTGCTCTGTGAGTG TGAT-GGGGCGGG GGGA CCCGCCCTAATCA TTTTGTGGTGATAAC TERM 1398 1773070 - 1773091 + T 71 -13.7 -2.51535 | overlap 1773067 GCTCTGTGAGTGTGA TGGGGCGGG GGGA CCCGCCCTA ATCATTTTGTGGTGA TERM 1399 1774897 - 1774879 - T 95 -10.2 -4.59109 | overlap 1774880 CAGACGCGGCAAAAA GCTGCCCG GAT CGGGCAGG CAGAGCTTGGCGTAT TERM 1400 1774896 - 1774880 - T 77 -13.7 -3.34984 | overlap 1774879 AGACGCGGCAAAAAG CTGCCCG GAT CGGGCAG GCAGAGCTTGGCGTA XOO1718 1775473 - 1774916 - | hypothetical protein TERM 1401 1775923 - 1775884 - H 72 -12 -3.29829 | gap 1, opp_overlap 1775915 TACAGGCTGCCACAA GCCGCCCGCGCGCGCCATC GGC GAGGGCAT-CGCGGCCGGC ACCGCATTGTGATGC TERM 1402 1777304 - 1777349 + G 72 -8.4 -4.16284 | overlap 1777305 ACTACGACCCGCTGG T-GGCCGATCTGTTCTGGCAGG CCTG CGCGCCGGAACAGAT-GGCCTA TTTCTTGCGCGATAT TERM 1403 1777305 - 1777347 + G 81 -13.5 -3.67877 | gap 1, overlap 1777304 CTACGACCCGCTGGT GGCCGATCTGTTCTGGCAGG CCTG CGCGCCGGAACAGAT-GGCC TATTTCTTGCGCGAT TERM 1404 1777512 - 1777542 + G 81 -11 -4.07568 | CTGGGCACGTGCCCG CTGCGCGGGGATGG ACA TCGCCCCGGCGCAG TTTTCGGCCGCCGCC XOO1719 1776880 - 1777809 + | hypothetical protein TERM 1405 1778181 - 1778226 + G 72 -8.4 -4.09243 | opp_overlap 1778163, overlap 1778223 CGAGCGCATGGAGTT CATCACCCTGCGCTAT-CCGCA TCTG TGCGGCACGGTGT-GGGTGATG TTTTCCGAGCATCTG TERM 1406 1779511 - 1779567 + G 76 -14.4 -3.14132 | gap 2, opp_overlap 1779511 1779510 1779513 GAGGCAGCGCAGAAG CAGG-CCGCTCCGCTGACG-GCAACGGA CCG TCTGCTGCGTGACAGCGGGGCGGACCGG TTCGTGACCACGGCG XOO1720 1777915 - 1780641 + | hypothetical protein XOO4780 1781422 - 1781955 + | hypothetical protein TERM 1407 1782135 - 1782149 + T 100 -11.4 -5.27923 | ATCAGCAGTTTAGAT GGCACC GAA GGTGCC TTTTTTGTGCAATTG XOO1721 1783053 - 1782622 - | response regulator XOO1722 1783611 - 1783105 - | hypothetical protein recQ 1785537 - 1783741 - | DNA helicase TERM 1408 1784579 - 1784591 + g 74 -10.5 -3.80573 | GGGTCGCCGTCGCGA CCGGC GCG GCCGG TTTCCTGGTAGTAGC TERM 1409 1785814 - 1785796 - R 71 -13.8 -2.52464 | opp_overlap 1785791 1785787 GGGCGCTCCAAGGCA CGCGCGCC AGT GGCGCGCA AGCTGTGCCTTCTCG TERM 1410 1785889 - 1785871 - R 83 -16 -2.85999 | overlap 1785854 CGACCGCACACCACA GCCCCCTG AGT CAGGGGGC GCGCCGAAGGCGGGG XOO1724 1786688 - 1786095 - | DNA-binding related protein TERM 1411 1786586 - 1786623 + g 72 -3.4 -4.63592 | overlap 1786573 1786589 GTGCCGATGCGGCGG CGACCGGCAGG-GCGTCG ACGG CGACGGGCTTGTTGG-CG TTCTTTTTCTTGGAC TERM 1412 1788795 - 1788781 - gH 77 -11.4 -3.71848 | overlap 1788760 TGCTGCGACGAACAA GCAGGC CGA GCCTGC CGAAGCATCTGCGCT TERM 1413 1790854 - 1790831 - g 82 -3.8 -5.00616 | gap 1, overlap 1790833 GTCTCGGCGAAAAAA CTGTCGCAACG TGT CGCTGC-ACTG CGCAGTTGAGCCTTT hrpA 1786742 - 1790863 + | ATP-dependent RNA helicase XOO1726 1790787 - 1791929 + | putative transposase TERM 1414 1791970 - 1792007 + T 70 -9.8 -3.62597 | opp_overlap 1791974 1791995, overlap 1791973 AAGCATGTATCTGCA GCAAGTCGCGTGCGTT TTTTAC AACGCGCGCGGCGTCC TTCTTCAAGGCTCGG fepA 1794878 - 1792164 - | TonB-dependent receptor TERM 1415 1795237 - 1795223 - R 90 -2.1 -5.41143 | gap 1, opp_overlap 1795231 1795233, overlap 1795233 CAGGCCGCAAAAAAA GCTGCA ATCA TGC-GC GCGCCAGCGCATCGT TERM 1416 1795434 - 1795457 + r 75 -13.8 -3.05384 | TTCTTGCTCACGCGT GCCGGCCAGC GCGA GCTGACCGGC TTCGGTGGCCAGCAC glk 1796001 - 1795582 - | glucose kinase XOO1731 1797957 - 1796302 - | hypothetical protein TERM 1417 1796746 - 1796791 + g 83 -14.7 -3.29144 | gap 1, overlap 1796732 1796737 GGCGCGGATGTTGTG CGCGCTGTTGGGCAGT-ACGCG CAG CGCCTTGATGCCCGGCAGCGCG TTGTAGAAGAACTGG XOO1732 1798766 - 1798245 - | hypothetical protein pqqE 1800136 - 1798820 - | pyrroloquinoline quinone biosynthesis protein PqqE TERM 1418 1799777 - 1799763 - G 82 -6.4 -4.62069 | TCGCCACCGGAAAAA TGCGCT TGC AGCACA CCCATCTCGGCGGCC pqqC 1800998 - 1800210 - | pyrroloquinoline quinone biosynthesis protein PqqC pqqG 1801858 - 1800959 - | pyrroloquinoline quinone biosynthesis protein PqqB TERM 1419 1801391 - 1801379 - GH 71 -9.1 -3.7282 | CGATTCCATGAACAA CGGCA CCT TGCCG GGCACAGAGAATGGG TERM 1420 1802077 - 1802047 - H 82 -11.1 -4.09685 | TCGCAGTTGGGAAAA CGTCGCGGGTTGC TGGAT GCAACCGGCGAAG TGGCCTGAGCATAGG TERM 1421 1802827 - 1802813 - g 70 -7.8 -4.00042 | CGTCTCAGTAAAGAA CAGCGC CAT GCACTG GCCCAACTCACGCGC relA 1802201 - 1804498 + | ATP:GTP 3'-pyrophosphotranferase XOO1737 1804563 - 1806209 + | hypothetical protein TERM 1422 1806582 - 1806557 - T 76 -8.9 -4.16016 | overlap 1806560 TCACTCCGCAATAAA CAACGCCCGCA CCGT CGCGCGCGCTG CATCCAGCGAAAAAT XOO1738 1808569 - 1806542 - | glycosyltransferase TERM 1423 1807137 - 1807160 + g 71 -12.4 -3.21276 | overlap 1807132 1807136 GCCGTGCGAATGTGC GGCGCATCTG TGCG CAGTTGCGCC TGTTCTGCGGCCGAC TERM 1424 1807321 - 1807339 + g 73 -12.4 -3.33696 | opp_overlap 1807320 1807319, overlap 1807323 CGGTATCGAACAAGG TGCGCGCC TGT GGCGCGTA TTGCTTGAGCAACGG TERM 1425 1807323 - 1807337 + g 74 -12.8 -3.23853 | opp_overlap 1807320 1807319, overlap 1807321 GTATCGAACAAGGTG CGCGCC TGT GGCGCG TATTGCTTGAGCAAC TERM 1426 1807423 - 1807403 - G 71 -10.4 -3.62572 | TAGCACCACCGCAAA CCGCGCAC CGTGC GTGCGCAG CCAGCTGCCGACGCC ponB 1808886 - 1811330 + | penicillin-binding protein 1B TERM 1427 1811574 - 1811623 + G 77 -15.8 -2.62184 | gap 3, opp_overlap 1811568 1811562, overlap 1811594 1811595 AAAGAGCAAGCGTCA GG-CCGGCGATCTGG-CCGGCGCCG CCG CGGCGCTGGATCAGG-CGCTGGGCC TGGTGTCGGGCGACC XOO1740 1811332 - 1811868 + | hypothetical protein TERM 1428 1812350 - 1812382 + GF 73 -12.5 -3.14132 | GATCTGCCGCGCGTG CGCGCCGCGCTGGGC GTG GGCCTGCGTAGCGCG TTGCTGAAGGGCCGC TERM 1429 1812433 - 1812448 + GF 75 -11.8 -3.53012 | opp_overlap 1812418 CCGCACCCAGCAGGC GCGCGG TGAG CCGCGC TTTGCCACGCCCGAA yoaA 1812068 - 1814095 + | ATP-dependent helicase TERM 1430 1814815 - 1814787 - gf 76 -13.7 -3.14211 | overlap 1814762 1814789 ACCCTGGTCGAGCAA CAGGCCGCCCGCG CCG CGAAGGCGGCCGG CGCATCGCCATGACC TERM 1431 1814813 - 1814789 - gf 80 -14.9 -3.13403 | overlap 1814762 1814787 CCTGGTCGAGCAACA GGCCGCCCGCG CCG CGAAGGCGGCC GGCGCATCGCCATGA XOO1742 1814016 - 1814828 + | hypothetical protein draG 1814825 - 1815739 + | dinitrogenase reductase activationg glycohydrolase tonB 1816908 - 1816033 - | TonB protein gshB 1817876 - 1816905 - | glutathione synthetase TERM 1432 1817444 - 1817478 + g 90 -15.6 -3.57783 | opp_overlap 1817463 GGCTGACCAGGGTGG GCGGGCAGCACTGCGG AAA CAGCAGCGCTGCCAGC TTCTCGTTGTAGTCG pilG 1818105 - 1818506 + | pilus protein TERM 1433 1818731 - 1818714 - g 72 -12.7 -3.05384 | GCGGCTTCCAGGCAA CGCGTGC ACTT GCACGCG ACCAGGCTACCAAGG pilH 1818524 - 1818886 + | PilH pilI 1818883 - 1819416 + | pilus biogenesis protein TERM 1434 1821050 - 1821074 + G 81 -12.7 -3.58343 | CTGCGGTGCAGGCAG CATCGGCCGGC GAG GCCGGCCGCGG TTTCGCCGTGGTGGC TERM 1435 1821206 - 1821181 - g 72 -11.1 -3.43071 | overlap 1821178 1821203 GCCGATACCAACGAA GCGGTCAGCTC GATG GAGCAGACCAC CTCCGAAGTGGTGTC TERM 1436 1821349 - 1821308 - g 72 -11.6 -3.44552 | gap 1, overlap 1821306 ACCTGATTAAGAACA TCTCCATCGCCGCGCACCA GCAGT CGGC-CGCGGCGACGGATA TCACACAGACCATGG pilJ 1819456 - 1821492 + | pilus biogenesis protein TERM 1437 1822860 - 1822876 + F 70 -10.1 -3.57792 | TATTGGCCGCTGCCG TCGGGCG AGC CGTCCGA TTTGCCGATCGGTGC TERM 1438 1825465 - 1825443 - f 74 -12.6 -3.2614 | overlap 1825444 CAGCCGGCAGACGAA GCGGCGCAGC ACG GCGACGCCGC GCTGCCGCATGCTGG TERM 1439 1825529 - 1825500 - f 77 -13.5 -3.34962 | TCGCATACCGGAGAA CAGCAGCACGCCG AGGT CGCCGCGCCGCTG GGCGAACACGCAGAC TERM 1440 1828062 - 1828092 + F 71 -14.1 -2.58544 | gap 1, overlap 1828061 1828064 CGGTATCTACGGCGC CACCATCAC-CGGC GATG GCCGCGTGGTGGTG ATTCTGGACGTCGCG TERM 1441 1829522 - 1829538 + G 77 -15.1 -2.80935 | CTGGCATTCGTGTCG CCGGCCG ACC CGGCCGG TCTGATCGCTGCGCT XOO1752 1828526 - 1829770 + | hypothetical protein XOO1753 1829804 - 1830280 + | hypothetical protein rimJ 1830531 - 1831154 + | ribosomal protein alanine acetyltransferase XOO1755 1832428 - 1831166 - | ISRSO5-transposase protein TERM 1442 1833348 - 1833375 + r 77 -12.6 -3.54424 | GACCGACGCAGCGAG CGCCAGCGCCGG GTCT CCAGCGCTGACG TTTGGAACGATGCCG XOO1756 1833737 - 1833477 - | hypothetical protein XOO1757 1835035 - 1833983 - | hypothetical protein TERM 1443 1834197 - 1834214 + g 72 -8.3 -4.07885 | overlap 1834201 CCGAGCGTGGACAGG GCGACGC CGGA GCGGCGC TTTTCGGACACCATG XOO4782 1835492 - 1835659 + | putative transposase TERM 1444 1835682 - 1835718 + F 81 -15.3 -3.05844 | gap 1 TACTACCAGTGCCGG GCGTGCCGGCAT-CAA ACCACC TTGCGTGCCGGCACGC TGTTGCAATCGAGCA TERM 1445 1836823 - 1836844 + F 70 -10.1 -3.55122 | gap 1, opp_overlap 1836821, overlap 1836823 CCGCATGATGGAAGG CGGCTGCCGC ACT GCG-CGGCCG TTCGTTTCCATCATG TERM 1446 1836933 - 1836899 - g 88 -17.9 -3.02511 | gap 1 GTCACTTCCTCAAGA GCGCCACGCTGGGCGC GATC GCGTCCAGCGTGGC-C GGCTGGGGCGCACGC TERM 1447 1837457 - 1837443 - g 81 -11.4 -4.1466 | AGCCAATGTGGAAAA TCGCGC CTG GCGCGA TGCCAAATTACCGGG aspG 1836871 - 1837935 + | asparaginase cutC 1837932 - 1838663 + | copper homeostasis protein XOO1762 1840241 - 1838688 - | leucin rich protein TERM 1448 1838798 - 1838775 - G 75 -9.4 -4.00348 | GGTGAAGGAAGGAAA GCGTGCCCGG TCTT CCGGGTGCGC ATCGACAATCAACTC TERM 1449 1839094 - 1839108 + g 80 -8.5 -4.37886 | TGGCCGAAGGTGGTA GCGCC GGGCG GGCGC TTTTCTGGAAGATAG XOO1763 1841891 - 1840788 - | hypothetical protein XOO1764 1842780 - 1842394 - | transposase XOO1767 1844082 - 1843972 - | hypothetical protein TERM 1450 1846540 - 1846550 + G 74 -4.6 -4.56775 | ACGGGCAGGAAAAGG CGCT GGA GGCG TTTTTGCAGAGCGGT XOO1768 1844913 - 1847321 + | hypothetical protein bga 1849326 - 1847371 - | beta-galactosidase TERM 1451 1849373 - 1849342 - R 80 -5.6 -4.69053 | overlap 1849329 1849345 GAGCAGCGAACAAAA CGACTGCGCTCACC GCCA GGCGGGCGCGGCAG GTGCCCGGAATCGGC XOO1770 1851894 - 1849492 - | hypothetical protein TERM 1452 1849822 - 1849781 - G 75 -9.4 -4.05033 | gap 1, opp_overlap 1849781 1849779, overlap 1849785 TCGACCGCATACAAA CCGAGGGCA-CTGAGCACG AACCA CGCGCTCATCTGCCCGCAG TCTTCGTTGCCGGAC TERM 1453 1850815 - 1850868 + g 76 -6 -4.56597 | opp_overlap 1850818 1850821, overlap 1850821 1850822 ATACAGGCCGGTGTA GAAGATGCGCCGT-TGCGCGTCGTCA TCGC TGTCGATGCGCACGCGG-GCGAGTTC TTTTTCCCAGGCGGC XOO1771 1853433 - 1851970 - | hypothetical protein XOO1772 1854236 - 1855651 + | membrane-fusion protein XOO1773 1857263 - 1856295 - | putative transposase TERM 1454 1856564 - 1856553 - G 76 -2.2 -4.8622 | overlap 1856554 GGCGGCAATGAAAAA TGCA GCCT CGCA GCTCTGCAACTCGTC TERM 1455 1857483 - 1857452 - H 81 -10 -4.1413 | overlap 1857453 AACATATTGGCAAAA GCCCTCCCTCCGCC TTCC GGCGGAGGGAGTTA AACGGATCAGGGAGC TERM 1456 1857482 - 1857453 - H 75 -13.5 -3.07755 | overlap 1857452 ACATATTGGCAAAAG CCCTCCCTCCGCC TTCC GGCGGAGGGAGTT AAACGGATCAGGGAG XOO1774 1857506 - 1858624 + | hypothetical protein TERM 1457 1859068 - 1859050 - T 74 -4.6 -4.54253 | AAAGCACTAAAGAAA TTTGAACC CAT GGTTAAAA GTGGTGAAATAGATG XOO1777 1861322 - 1860063 - | transposase TERM 1458 1862823 - 1862798 - g 81 -11.1 -4.07885 | GACTCCGCCGGAAAA GCAGCACGCAC AACC GCACGCGCTGC CACCCGCCGAGCCAA XOO1778 1861431 - 1863545 + | colicin V secretion ABC transporter ATP-binding protein TERM 1459 1863665 - 1863637 - T 100 -22.5 -3.09516 | opp_overlap 1863637 1863661, overlap 1863639 CGCCCCATCATGCAA CAGGCGCCGACTG AGA CAGCCGGCGCCTG TTGTGCGTCACGCAA TERM 1460 1863637 - 1863665 + T 95 -20.3 -3.35679 | opp_overlap 1863637 1863639, overlap 1863661 CGCCCCATCATGCAA CAGGCGCCGACTG AGA CAGCCGGCGCCTG TTGTGCGTCACGCAA TERM 1461 1863663 - 1863639 - T 91 -19.3 -3.10796 | opp_overlap 1863637 1863661, overlap 1863637 CCCCATCATGCAACA GGCGCCGACTG AGA CAGCCGGCGCC TGTTGTGCGTCACGC XOO1779 1866359 - 1863690 - | glucan 1,4-beta-glucosidase TERM 1462 1866187 - 1866200 + g 79 -2.3 -5.06816 | overlap 1866175 1866188 GCAGGCGCATCGTTC ATGGC CTGC GCCAC TTTTTCTTCGCGGCT TERM 1463 1866496 - 1866553 + r 76 -14.1 -3.18429 | overlap 1866487 1866498 CACTCACCGCGCTAT GTGGTCTTCGCGGATGACGCAGCGTAC TTAC GCGTGCTGCGTCATCTGCTGAGACCTG TTCCTGACGGTTTTA TERM 1464 1866498 - 1866551 + r 95 -21.1 -3.14795 | overlap 1866487 1866496 CTCACCGCGCTATGT GGTCTTCGCGGATGACGCAGCGTAC TTAC GCGTGCTGCGTCATCTGCTGAGACC TGTTCCTGACGGTTT XOO1780 1869247 - 1866566 - | beta-mannosidase nahA 1871803 - 1869269 - | beta-hexosaminidase XOO1782 1873184 - 1872117 - | hypothetical protein fucA1 1874903 - 1873188 - | alpha-L-fucosidase TERM 1465 1874937 - 1874987 + r 81 -16.1 -2.77899 | gap 1, opp_overlap 1874937, overlap 1874934 GCGTGGATGGCAAAA GCGGATCTGGCCATGCTCCC-TCG GCGG CGAAGGGGGCGTGGCCAGTACCAC TCCTTGGTGCAACAA TERM 1466 1874987 - 1874937 - R 93 -13.9 -4.13767 | gap 1, opp_overlap 1874934 1874937 GCGTGGATGGCAAAA GCGGATCTGGCCATGCTCCC-TCG GCGG CGAAGGGGGCGTGGCCAGTACCAC TCCTTGGTGCAACAA TERM 1467 1875031 - 1875007 - R 74 -12.2 -3.53444 | gap 1, overlap 1875003 TGGTGCAACAACGAA CCTG-CCGCTG CAGA CAGCGGACAGG TCAAAAAAAAAGCGC TERM 1468 1875072 - 1875043 - R 100 -17.9 -6.09133 | CAGGTCAAAAAAAAA GCGCGCCACCG TGGAGGGG CGGTGGCGCGC TCTCGCTACATCAGA iroN 1877794 - 1875083 - | TonB-dependent receptor TERM 1469 1876115 - 1876101 - G 78 -12.8 -3.54475 | TGCGCCAGCAGATAA CGGCGC ACC GCGCCG AGATTGGCGGTCGGC TERM 1470 1876754 - 1876790 + g 77 -5.1 -4.63527 | gap 1 GGACACCGTGGCCGA GGTGAC-CACGCCGTT CTCCAC ATTGGCGCGGGTCACC TTTTTCAGATCGTCG TERM 1471 1878168 - 1878193 + H 89 -11.3 -4.26903 | gap 1 ATAGATCTCTGGTGT TGCTGCGATTGC GCT GCAAT-GCAGCA TTTTCATGAAGTAGC TERM 1472 1878911 - 1878945 + G 78 -14.3 -3.22298 | gap 2, overlap 1878912 1878941 ACCAGGTCATGCAGT TGTCGGGCCC-CG-CGC AAG GCGCCGCGGGCCCGGCG TTGGTGCTCGGTCCG TERM 1473 1878912 - 1878944 + G 77 -15.6 -2.53164 | gap 2, overlap 1878911 1878941 CCAGGTCATGCAGTT GTCGGGCCC-CG-CGC AAG GCGCCGCGGGCCCGGC GTTGGTGCTCGGTCC glk 1878412 - 1879512 + | glucokinase TERM 1474 1879795 - 1879740 - T 100 -36.3 -3.02511 | overlap 1879773 CGCATTCCCGTAAGA GCGCACCCGGGCGCGACGAGGCGTT GCCGAT AACGCCCCGTCGCGCCCGGGGACGC TGCCACGATGTCGTG XOO1786 1880617 - 1879814 - | hypothetical protein TERM 1475 1880160 - 1880170 + gT 77 -4.6 -4.65895 | opp_overlap 1880146, overlap 1880149 ACCACGCTGCGCCAG TGCG CCA CGCG TTTTTCCGTGCGCGC TERM 1476 1880280 - 1880323 + gT 77 -12.7 -3.33696 | gap 3 ATCAGATCCATCTTC TCGCCGCGTGC-GAT-GCCTTG CAT CAAGGTGATCCGCA-GCGGCGA TTCGTTGGAGAGCGG bioA 1881957 - 1880539 - | adenosylmethionine--8-amino-7-oxononanoate transaminase TERM 1477 1881696 - 1881711 + gH 70 -11.8 -3.12351 | overlap 1881708 CCTGGCGCGCGATGG CCGCGC CGAT GCGCGG TTCGGTATGGCCGAA TERM 1478 1883188 - 1883225 + G 76 -14.1 -3.14602 | gap 1, overlap 1883185 GTCCGAGTGGGATAC CGCCGCCGGCC-AGTGCG TGC TGCATGCGGCCGGTGGCG TATTGCTGGCCTGCA cysQ 1882544 - 1883344 + | sulfite synthesis pathway protein mazG 1883587 - 1884606 + | nucleoside triphosphate pyrophosphohydrolase XOO1791 1884603 - 1884857 + | hypothetical protein XOO4784 1884845 - 1884940 + | hypothetical protein TERM 1479 1885125 - 1885156 + F 86 -7.8 -4.69053 | overlap 1885150 GCCGATTCCGAGTAC CGGCCGCGTCCGCC TGGC GGTGAGCGCAGTCG TTTTGTTGGCTGCTC XOO1792 1885238 - 1886203 + | hypothetical protein TERM 1480 1886680 - 1886718 + G 70 -11.6 -3.32963 | overlap 1886683 CGCTGCCAATGTCCG CATTGTTGCAGCGCGGCG TAG CATCGCGCTGCGTCACTG TTCTCCAATCAGCGT XOO1793 1886207 - 1886785 + | hypothetical protein TERM 1481 1886991 - 1887004 + G 73 -9.5 -3.86015 | overlap 1886990 TCGACCTGCACGGTG CGCGC GTAC GCGCG TTTCTGCGCGACCTG TERM 1482 1887660 - 1887646 - g 71 -7.8 -4.11216 | opp_overlap 1887648 GCTCGAGTCGCAAAA GGCGCA GGG TGCACC GCGTCAGTTGATCGG gcvT 1886813 - 1887922 + | glycine cleavage system aminomethyltransferase T gcvH 1888059 - 1888454 + | glycine cleavage system protein H TERM 1483 1888482 - 1888502 + F 100 -16.9 -5.75342 | GCCGCCGGCATCCGA TGGCCGCTC TCA GAGCGGCCA TTTTTTTTGGCGCGC TERM 1484 1889066 - 1889088 + F 71 -5.5 -4.33274 | gap 1, overlap 1889067 TGCTTTTCGGTGAGG C-GCGTACGC CGGT GCGCACGCTG TTTTGCTGCTCTGGA TERM 1485 1889067 - 1889086 + F 71 -9.2 -3.76811 | overlap 1889066 GCTTTTCGGTGAGGC GCGTACGC CGGT GCGCACGC TGTTTTGCTGCTCTG TERM 1486 1889322 - 1889301 - g 81 -2.9 -5.00616 | gap 1, overlap 1889304 CTTCTCTCCAAAAAA GCAGCTGTCG TTC CGACTAC-GC ACACGTGTCGCCGCT TERM 1487 1889389 - 1889414 + G 81 -12.5 -3.91911 | TACCTGCGAACGGTT CCCGACGACGG CATG CCGTCGCTGGG TTTGGTTCAACTGGG TERM 1488 1889521 - 1889499 - g 83 -5.5 -4.85782 | overlap 1889500 1889501 1889513 GCTGCGAAAAAGAAA CCCACCGCC AAAAA GGCAGTGAA GAAGACTGCCGCCAA TERM 1489 1889531 - 1889513 - g 79 -6 -4.60041 | overlap 1889501 1889500 1889499 1889525 ACCCACCGCCAAAAA GGCAGT GAAGAAG ACTGCC GCCAAGAAGGCCGTC TERM 1490 1889969 - 1890000 + G 100 -15.2 -5.252 | opp_overlap 1889963 1889966 1889965 CGCCGTAAACATCGA GCTCTCTCCCCG ACGCCCAG CGGGGAGGGAGC TTTTTTATGCGCCTG XOO1796 1889147 - 1890229 + | hypothetical protein TERM 1491 1890783 - 1890760 - T 93 -16.8 -3.77722 | opp_overlap 1890764, overlap 1890764 GCTAATCAGGAACAA CAAAGGCGGC CGAA GCCGCCTTTG CCTGCAGTCACCGAC TERM 1492 1890764 - 1890779 + T 75 -11.8 -3.65902 | opp_overlap 1890760 1890764 ATCAGGAACAACAAA GGCGGC CGAA GCCGCC TTTGCCTGCAGTCAC TERM 1493 1890779 - 1890764 - T 100 -11.8 -4.49316 | opp_overlap 1890764, overlap 1890760 ATCAGGAACAACAAA GGCGGC CGAA GCCGCC TTTGCCTGCAGTCAC bla 1892289 - 1890823 - | beta-lactamase TERM 1494 1892762 - 1892785 + G 74 -5.3 -4.51699 | gap 1, overlap 1892741 1892764 1892765 GCTGAAGGACTTCAC GCTGCAGGTG CTGTT TACCTGC-GC TTTTCTGATCATTGT XOO1798 1892649 - 1893806 + | hypothetical protein XOO1800 1894081 - 1894530 + | hypothetical protein TERM 1495 1894684 - 1894701 + T 93 -2.5 -5.60993 | overlap 1894685 GACAAGGGGCTGACG GGCCACG TAGC CGGGGCG TTTTTTTCTGCCGCG TERM 1496 1894897 - 1894872 - T 100 -20.5 -4.06419 | opp_overlap 1894872 CGTGTCCACAAACAA CGACGGCGAGC CGAA GCTCGCCGTCG TTTACTGCTGTGAGC TERM 1497 1894872 - 1894897 + T 100 -20.5 -3.81951 | opp_overlap 1894872 CGTGTCCACAAACAA CGACGGCGAGC CGAA GCTCGCCGTCG TTTACTGCTGTGAGC XOO1803 1898288 - 1897395 - | hypothetical protein XOO1804 1898380 - 1899033 + | transcriptional regulator TERM 1498 1899116 - 1899093 - T 100 -21 -5.5112 | GGCATGAACAAAAAA GGGCGGGCCG CATG CGGCCCGCCC CTTGCAACTGGCAAC XOO1805 1902052 - 1899143 - | hypothetical protein TERM 1499 1900540 - 1900568 + g 70 -11.7 -3.35679 | overlap 1900532 CCAGATCGCCGCTGA CGTTGAGCGCGGC ATT GTCCTGCTCAACG TTCTGGATCGAGAAA TERM 1500 1900609 - 1900584 - G 79 -11.3 -3.91897 | opp_overlap 1900584 TTCTGGATCGAGAAA GCACTCAAATT GATA AACTTGAGTGC TTCTGGCGAAACAGA TERM 1501 1902019 - 1902031 + g 81 -9.1 -4.20918 | opp_overlap 1902008 1902019 CCAACGCGAGCACAA CTGCG TCG CGCAG TTTGTTGGACTTAAA TERM 1502 1902271 - 1902247 - R 100 -15 -4.3208 | opp_overlap 1902239 1902247 CTCCACAACGCAAAA CGCCACCGGC TGCAG GCCGATGGCG TTCAGTAAATTTTAA TERM 1503 1902247 - 1902271 + r 76 -13.5 -3.1319 | opp_overlap 1902247, overlap 1902239 CTCCACAACGCAAAA CGCCACCGGCT GCA GGCCGATGGCG TTCAGTAAATTTTAA XOO1806 1903169 - 1902300 - | hypothetical protein XOO1807 1904333 - 1903290 - | heat shock protein TERM 1504 1903700 - 1903668 - GH 77 -12.5 -3.61894 | overlap 1903670 AAGCTTCTGCAACAA CAGACCGGCGGCCTG ATC CGGGCCGGCGGCCAG TAACAGCCGCGTCGG TERM 1505 1903698 - 1903670 - GH 80 -13.7 -3.38812 | overlap 1903668 GCTTCTGCAACAACA GACCGGCGGCCTG ATC CGGGCCGGCGGCC AGTAACAGCCGCGTC mtgA 1904255 - 1904992 + | monofunctional biosynthetic peptidoglycan transglycosylase TERM 1506 1905600 - 1905629 + GFH 76 -9.9 -3.85698 | gap 1, overlap 1905601 GGTCGGATTCCGTCA GGTGGCGC-TGCCG TAT CGGCGCGCGCCGCG TTTGTCCGGGAACAG TERM 1507 1905601 - 1905628 + GFH 74 -13.4 -2.91276 | gap 1, overlap 1905600 GTCGGATTCCGTCAG GTGGCGC-TGCCG TAT CGGCGCGCGCCGC GTTTGTCCGGGAACA TERM 1508 1905812 - 1905843 + GFH 71 -8.7 -3.92373 | overlap 1905794 TGGGCGACCCGGTGG CAGGGTGGCCGAC CATGAT GTCGGTGATCCTG TTTCTGGGTGGCATG gtrB 1904935 - 1906041 + | glucosyl transferase XOO4788 1906001 - 1906099 + | hypothetical protein XOO1810 1906115 - 1906429 + | hypothetical protein XOO1813 1907884 - 1907732 - | hypothetical protein hly3 1908557 - 1907913 - | hemolysin III TERM 1509 1908213 - 1908174 - G 81 -2.8 -5.03314 | gap 1, overlap 1908188 GCGACCGGTAAAAAA CATCTTGAAGATCA-CTCC GGC GGCGGCGATCGTCCAGACG GCCGCAAACAATCCC prfC 1910237 - 1908633 - | peptide chain release factor 3 XOO1816 1911257 - 1910370 - | hypothetical protein TERM 1510 1911308 - 1911289 - H 83 -9.2 -4.26903 | overlap 1911301 TCGATTCGAGCAAAA GGGGCGCA AGTA TGCGGCCC ATCACGGGCGGGAGT TERM 1511 1912573 - 1912561 - g 73 -6.3 -4.41348 | CCTTCCTCAAAGAAA TCGAT CGT ATCGA CGCAATCATCACTAC metA 1911471 - 1912619 + | homoserine O-acetyltransferase metB 1912616 - 1913833 + | cystathionine gamma-synthase TERM 1512 1913906 - 1913927 + F 73 -6.5 -4.3739 | gap 1, overlap 1913888 1913925 GGCTGGCCTTGCTGG GCACCGGCAC CGT GGGCCG-TGC TTTTGTCACGCGCTA XOO1820 1914251 - 1914925 + | homoserine dehydrogenase TERM 1513 1915347 - 1915360 + T 72 -4.5 -4.59511 | gap 1, overlap 1915342 1915344 GCTCCAGGGCCTGCA GGCAGG CTG CC-GCC TTTTTAGCCCATGTT TERM 1514 1915622 - 1915639 + T 70 -7.7 -4.04897 | gap 1, overlap 1915626 CGATGACATTCACCG CCAGGCCG CCG CGG-CTGG TTTCCTTGTACTTGT sdaA 1916981 - 1915599 - | L-serine dehydratase TERM 1515 1916129 - 1916139 + g 91 -8.2 -4.79174 | opp_overlap 1916125, overlap 1916125 1916127 CGGTGACGACACGGC CGCC GGC GGCG TTTTCTTCATTGACT XOO1822 1917054 - 1917302 + | hypothetical protein XOO1823 1917777 - 1917388 - | cold shock domain-containing protein TERM 1516 1918069 - 1918041 - R 100 -11 -5.24129 | TGCGGGCACAAAAAA GCGGCGGACC CGACGAGGT AGTCCGCCGC TCAGTGGCTGCGTCC XOO1824 1918671 - 1918102 - | hypothetical protein yodB 1919244 - 1918681 - | cytochrome B561 TERM 1517 1918786 - 1918759 - G 83 -14.8 -3.28924 | CAGGTGGTGGTAGAA CGCGGCGCCGGC ATGT GCCAGCACCACG GCAATCAGCAGCCAG XOO1826 1919903 - 1919241 - | hypothetical protein TERM 1518 1922399 - 1922438 + G 71 -4.2 -4.58283 | gap 1, opp_overlap 1922400, overlap 1922400 GCTGGCGCAACACAA ACGCGAGTTGGCCGAGC AGGCGTC GCT-GGCCAAGACGCGC TTTTTGGCAACGTTG TERM 1519 1922437 - 1922400 - g 72 -8.4 -4.1891 | gap 1, opp_overlap 1922399 1922400 CTGGCGCAACACAAA CGCGAGTTGGCCGAGCA GGCGT CGCT-GGCCAAGACGCG CTTTTTGGCAACGTT XOO1827 1919943 - 1923575 + | histidine kinase-response regulator hybrid protein TERM 1520 1924870 - 1924888 + G 71 -4.4 -4.56597 | overlap 1924861 TATCTCCCGCCGGAT TGGCGGCG GTT CTCCACCA TTTTTGAAAGCCAAG TERM 1521 1924939 - 1924956 + G 74 -2.5 -4.72272 | opp_overlap 1924937, overlap 1924937 TATCTGTTCAATACC GCCGCCG ATGG CGACAGC TTTTTGGTAACGACC TERM 1522 1926571 - 1926581 + G 77 -4.6 -4.60797 | overlap 1926577 CCCATCGCAGATGCG CGCG GCT TGCG TTTTCTGTATCGCAA XOO1828 1923865 - 1927428 + | histidine kinase/response regulator hybrid protein XOO1829 1927425 - 1930031 + | histidine kinase-response regulator hybrid protein TERM 1523 1930782 - 1930793 + G 76 -2.2 -4.8622 | overlap 1930780 GACGAGTTGCAGAGC TGCG AGGC TGCA TTTTTCATTGCCGCC XOO1830 1930083 - 1931051 + | putative transposase XOO1831 1931162 - 1932235 + | histidine kinase-response regulator hybrid protein emrA 1932433 - 1932260 - | MFS transporter tnp 1932551 - 1932655 + | transposase XOO1833 1932855 - 1933154 + | hypothetical protein XOO1834 1933560 - 1933339 - | ISxac3 transposase TERM 1524 1935650 - 1935636 - g 78 -12.8 -3.53012 | opp_overlap 1935638 TGTCGTTCGCGGAAA CGGCGG TGC CCGCCG AGCGGCTGGCGATTG XOO1835 1933766 - 1935697 + | hypothetical protein TERM 1525 1936118 - 1936098 - g 86 -10.3 -4.30719 | GTGGCGCAGAACAAA GCGCTGGCC GAC GACCCGCGC CCGATGGATGCGCAG XOO1836 1935819 - 1936217 + | hypothetical protein bga 1938230 - 1937238 - | beta-galactosidase TERM 1526 1937288 - 1937303 + g 70 -7.5 -3.96624 | GGTCCAGGTCGTAGG CGCGG GTGTCG CCGCG TTTGTCGTCGCGCTG TERM 1527 1937746 - 1937770 + g 89 -2.1 -5.44119 | gap 1, overlap 1937749 AGCAGCACCTGCATG CCGT-GCGCG CGTGCA TGCGCAATGG TTTTTTTGACATCGG XOO1841 1941462 - 1940077 - | transcriptional regulator TERM 1528 1940143 - 1940116 - G 93 -18.4 -3.74693 | CGGCAGCGCAGGAAA CGCGCGCTGCAC GCAG GTGCTGCGCGCG CACGTCAGGCAGCCC TERM 1529 1941764 - 1941739 - gH 73 -12.5 -3.14931 | opp_overlap 1941735 1941734 GCCACCGCCGACGAA GTGGCCGCGGC AGTG GCCGCAGCCAG CCGCGCTTTCGTCAC TERM 1530 1942697 - 1942711 + GH 82 -4.2 -5.02074 | overlap 1942699 TCGAGCAAGGCAACT TCGTCG GGC CGACCA TTTTTTCCGGCGTCA mmsA 1941601 - 1943106 + | methylmalonate-semialdehyde dehydrogenase TERM 1531 1943763 - 1943740 - gf 91 -8.9 -4.78572 | gap 1, overlap 1943742 CCGCAAGGAAGAAAA GATGGGCTGG AACAG CCAGCCCA-C GCGCGGTGTGACCTT TERM 1532 1943762 - 1943742 - gf 86 -12.6 -4.00694 | overlap 1943740 GCAAGGAAGAAAAGA TGGGCTGG AACAG CCAGCCCA CGCGCGGTGTGACCT fadE9 1943075 - 1944298 + | acyl-CoA dehydrogenase paaF 1944295 - 1945092 + | enoyl-CoA hydratase TERM 1533 1945672 - 1945698 + G 75 -10 -3.86346 | overlap 1945673 TTCTGGCGCTGACTG GCGCGCCGCTGG ATA CCAGCGATGCGG TTTATGCAGGGCTCG TERM 1534 1945673 - 1945697 + G 71 -13.5 -2.91593 | overlap 1945672 TCTGGCGCTGACTGG CGCGCCGCTGG ATA CCAGCGATGCG GTTTATGCAGGGCTC XOO1845 1945092 - 1946264 + | enoyl-CoA hydratase mmsB 1946388 - 1947326 + | 3-hydroxyisobutirate dehydrogenase czcD 1947535 - 1948530 + | cobalt-zinc-cadmium resistance protein TERM 1535 1948709 - 1948687 - T 100 -15.6 -4.56597 | opp_overlap 1948687 1948690 GCCCTGCCGCAAAAA GAAGGCCGCC AAC GGCAGCCTTC TTGCATATCAAACGC TERM 1536 1948687 - 1948709 + T 76 -13.4 -3.12351 | opp_overlap 1948687, overlap 1948690 GCCCTGCCGCAAAAA GAAGGCCGCC AAC GGCAGCCTTC TTGCATATCAAACGC TERM 1537 1948690 - 1948706 + T 71 -9.3 -3.70773 | opp_overlap 1948687, overlap 1948687 CTGCCGCAAAAAGAA GGCCGCC AAC GGCAGCC TTCTTGCATATCAAA fadB 1950828 - 1948747 - | 3-hydroxyacyl-CoA dehydrogenase algU 1950933 - 1951685 + | RNA polymerase sigma factor RpoE TERM 1538 1952232 - 1952186 - gf 70 -12 -3.16055 | overlap 1952175 GAAACGCCCGACGAA GTGGGTGCGCTCGCTGCGGCCG TGC CTGCCGCTGCGCTGGCATCCAC TCGCCGCGGTGCAGC XOO1850 1951682 - 1952581 + | regulatory protein mucD 1952508 - 1954277 + | periplasmic protease TERM 1539 1954458 - 1954474 + G 82 -6.5 -4.7078 | opp_overlap 1954459, overlap 1954459 ATGTCCTCTGATTCA ATGCGGA ATA TCCGCAA TTTTTCCATCATTGC TERM 1540 1956162 - 1956146 - g 79 -2.2 -5.06414 | overlap 1956147 TTCGCGCAAGAAAAA GCTGCT GGAAA AGCAGA AAGAAGGCAAGAAGC lepA 1954443 - 1956248 + | GTP-binding protein LepA lepB 1956355 - 1957155 + | signal peptidase I XOO1854 1957186 - 1957563 + | hypothetical protein TERM 1541 1958023 - 1958012 - g 76 -2.2 -4.91712 | overlap 1958022 GGCAAGGCAGAAAAA GATC CCAA GACC CGGCTGCAGGAATGG rnc 1957553 - 1958233 + | ribonuclease III era 1958230 - 1959129 + | GTP-binding protein Era recO 1959353 - 1960075 + | DNA repair protein RecO XOO1858 1960946 - 1960224 - | hypothetical protein rumA 1961000 - 1962439 + | 23S rRNA 5-methyluridine methyltransferase XOO1860 1962614 - 1963111 + | hypothetical protein XOO1861 1964442 - 1963207 - | transposase TERM 1542 1964617 - 1964629 + H 71 -4.8 -4.4773 | overlap 1964623 TGCGGTTTTGGCGTG CTGG AACTG CCAG TTTTCATTACTCTAC XOO1863 1964671 - 1966047 + | IS1478 transposase frnE 1966092 - 1966850 + | polyketide synthase TERM 1543 1967700 - 1967714 + GF 100 -2.1 -5.75945 | gap 1, overlap 1967697 1967696 CGGTTTGCCGATGCC GCAGTC ATGC GAC-GC TTTTTTTTGGACGGT XOO1865 1966810 - 1967901 + | hypothetical protein TERM 1544 1968902 - 1968916 + G 76 -2.7 -4.88407 | overlap 1968902 1968903 AAGATGCGATGAGCA CGCGC AGCCC GCGCC TTTTTCATTCGCTGC XOO1866 1968082 - 1969659 + | hypothetical protein nagZ 1969695 - 1970780 + | beta-hexosaminidase hpt 1970780 - 1971334 + | hypoxanthine-guanine phosphoribosyltransferase deoD 1971402 - 1972172 + | 5'-methylthioadenosine phosphorylase scoF 1972238 - 1972465 + | cold shock protein TERM 1545 1972492 - 1972507 + T 100 -11.8 -6.06723 | opp_overlap 1972492 TGTGCGGTTGAAGAA CCCCGC CACG GCGGGG TTTTTTTTTGCGCAG TERM 1546 1972507 - 1972492 - T 75 -11.8 -3.61398 | opp_overlap 1972492 TGTGCGGTTGAAGAA CCCCGC CACG GCGGGG TTTTTTTTTGCGCAG TERM 1547 1972669 - 1972694 + T 100 -14 -4.46212 | overlap 1972681 GTCTTCGAGCGCGCG CCTGCGCCCG GGCCAG TGGGCGCAGG TTTTCTACTGCAGCC XOO1873 1974644 - 1974000 - | hypothetical protein lhr2 1977135 - 1974634 - | helicase-related protein TERM 1548 1977111 - 1977085 - G 75 -15.2 -2.71011 | overlap 1977090 1977094 ACGCTGCGCGAACCA GGCAAGCCATTG CTG CAATGGCGTGCC ATGCGGCGGCCGCGT lig2 1978736 - 1977132 - | ATP-dependent DNA ligase TERM 1549 1978752 - 1978719 - G 74 -13.1 -3.28924 | gap 1, opp_overlap 1978719, overlap 1978729 CAGGGTGCGGTACAA CGCCGCGAAACGCTTC ACG GCAGCG-CCCGCGGCG TTGTGCGCCTGTCGG XOO4790 1978966 - 1978733 - | hypothetical protein TERM 1550 1978894 - 1978877 - G 79 -10.5 -4.08767 | GCGATGCGCGCAAAA CGCCAGC GCGT GCCGGCG CAACGCAAGCGCACC XOO1876 1980057 - 1978963 - | mRNA 3'-end processing factor XOO1877 1980687 - 1980322 - | hypothetical protein XOO1878 1981319 - 1980684 - | hypothetical protein TERM 1551 1980722 - 1980735 + g 70 -5.9 -4.23674 | CGCCACTCGCGTTGC CGGCG CTAC TGCCG TTTGTCTTGATGCCA XOO1879 1983081 - 1981372 - | sensor histidine kinase TERM 1552 1983162 - 1983138 - R 83 -14.2 -3.48276 | overlap 1983117 1983114 1983112 1983139 TGTCGGCGGAGACAA GCGCGCCGGC ACATG GCCGGCGCGT TGCGGGTGCTGCGGA TERM 1553 1983161 - 1983139 - R 86 -17.7 -2.68823 | overlap 1983117 1983114 1983112 1983138 GTCGGCGGAGACAAG CGCGCCGGC ACATG GCCGGCGCG TTGCGGGTGCTGCGG XOO1880 1983516 - 1983190 - | hypothetical protein TERM 1554 1983713 - 1983695 - R 100 -16 -5.31519 | opp_overlap 1983695 ACAGGCAAAGAAAAA GCCGCTGG AAA CCAGCGGC TTTTTCCGAACTCGC TERM 1555 1983695 - 1983713 + r 100 -16 -4.58395 | opp_overlap 1983695 ACAGGCAAAGAAAAA GCCGCTGG AAA CCAGCGGC TTTTTCCGAACTCGC atoB 1985388 - 1984213 - | acetoacetyl-CoA thiolase TERM 1556 1985444 - 1985466 + H 70 -10.4 -3.66654 | opp_overlap 1985449 GGCCGCGCCGCGCCA GCACACGCGC CCC GCGCGCGCGC TTTCCGATTACAGTA XOO1882 1985544 - 1988372 + | serine protease TERM 1557 1988359 - 1988379 + T 73 -13.3 -3.20382 | overlap 1988349 TGAGCCTGCGTTATA GCGCCGATT TCT GATCGGCGC TTCATCCGTCTGACC TERM 1558 1988402 - 1988431 + T 90 -17.9 -3.05384 | overlap 1988416 GTCTGACCCATGTAT TCCCTGTCCAGGC AGCT GCCTGGACAGGGC TTCACTCGCCGCGCA leu 1989533 - 1988433 - | leucine dehydrogenase TERM 1559 1989642 - 1989608 - R 100 -6.3 -5.63517 | opp_overlap 1989637 GTGGGAAACAAAAAA CGCGACGTTTACAGA TCCTG TCCGATCACGTCGCG CTGCAACATTTTAAA TERM 1560 1989859 - 1989889 + r 78 -6.7 -4.63932 | gap 1, overlap 1989861 CCGATTCCGAGCACC CG-CCGCGCCCGCC TTGC GGTGAGCGCAGTCG TTTTGTTAGCCGCTC XOO1884 1990561 - 1990001 - | hypothetical protein TERM 1561 1990913 - 1990901 - H 71 -9.1 -3.70109 | CACACGATCGAACAA CGGCA CGG TGCCG ATGAGGAGCTAACAT XOO1885 1990930 - 1991103 + | hypothetical protein TERM 1562 1991182 - 1991164 - T 100 -16 -4.77438 | opp_overlap 1991164 ACCCAGTATCAAAAA GAGCGGCC AAT GGCCGCTC TTTTTTGTTCTGCAA TERM 1563 1991164 - 1991182 + T 100 -16 -5.55769 | opp_overlap 1991164 ACCCAGTATCAAAAA GAGCGGCC AAT GGCCGCTC TTTTTTGTTCTGCAA XOO1886 1991518 - 1991264 - | hypothetical protein XOO1887 1991693 - 1991959 + | hypothetical protein XOO1888 1992818 - 1992150 - | hypothetical protein XOO1889 1992892 - 1993881 + | ISxac1 transposase XOO1890 1993882 - 1994115 + | ISxac1 transposase XOO1891 1994141 - 1995523 + | putative ISXo8 transposase TERM 1564 1995647 - 1995616 - T 100 -11.4 -5.05116 | GTAGAAATAACAAAA CGACTGCGCTCACC GCCA GGCGGGCGCGGCCG GTGCTCGGAATCGGC TERM 1565 1995785 - 1995756 - T 100 -16.5 -4.14392 | opp_overlap 1995760, overlap 1995760 CTCCAAGTCGGAAAA CAAACGTGCCACC TTGC GGTGGCACGTTGG TACAACAATCCAGCT TERM 1566 1995760 - 1995781 + T 83 -15.9 -3.14564 | opp_overlap 1995756 1995760 AAGTCGGAAAACAAA CGTGCCACC TTGC GGTGGCACG TTGGTACAACAATCC TERM 1567 1995781 - 1995760 - T 100 -15.9 -4.66535 | opp_overlap 1995760, overlap 1995756 AAGTCGGAAAACAAA CGTGCCACC TTGC GGTGGCACG TTGGTACAACAATCC XOO4791 1996101 - 1995916 - | hypothetical protein yegD 1997697 - 1996291 - | heat shock protein XOO1895 1999690 - 1998455 - | transposase TERM 1568 1999915 - 1999936 + r 71 -10.9 -3.406 | gap 1, opp_overlap 1999893 1999911 CATACGACACATGGC CGCCGCAGAC GCC GT-TGCGGCG TTCATTCCGTCTTCG catA 2000870 - 1999938 - | cation transport protein XOO1898 2000928 - 2001437 + | hypothetical protein XOO1899 2002649 - 2001726 - | hypothetical protein TERM 1569 2002882 - 2002853 - RH 82 -14.4 -3.32844 | gap 1, opp_overlap 2002880 TGCCTTATCCCACAA CGACCGCACCGTG CCAGT CA-GGTGCGGTCG CGTGGTCAGCGGCTG TERM 1570 2002880 - 2002906 + rH 70 -11.6 -3.14564 | opp_overlap 2002853, overlap 2002903 GCCAGTCAGGTGCGG TCGCGTGGTCAG CGG CTGATCAGGCGA TTACTCCGGCAATGC nerA 2004247 - 2002907 - | GTN reductase TERM 1571 2003323 - 2003310 - GH 71 -8.1 -3.86897 | opp_overlap 2003321 2003322, overlap 2003314 GTTACCGGCGACAAA CGCAC GCCG GTGCG CTCGGCAGCGATTTC TERM 1572 2004450 - 2004497 + GH 71 -9.6 -3.77553 | overlap 2004446 2004438 2004471 2004488 CTGGGCGTTGTGGTC GGTGCGCCCTTGCTGGCGATTC TGGG GGCGCGCTGGCCGCGGCGCACC TTGTTGCTGCTGTTG araJ 2004246 - 2005457 + | MFS transporter TERM 1573 2006423 - 2006367 - g 70 -11.3 -3.30441 | opp_overlap 2006370, overlap 2006370 GACCATCGCCGACAA GGACACACCGGCTGCCGCACGCGAAGC CGC GCTGCGCCTGCTGCCGGAGGTGCGTGC TTGCCATGACGTCAT XOO1902 2006020 - 2006475 + | hypothetical protein TERM 1574 2006543 - 2006570 + F 100 -17.8 -4.49353 | opp_overlap 2006540, overlap 2006547 AAAACGATAAAGGCG GAGACGGGCAGC GCAA GCTGCCCGTTTC TTTATTGTGTTGTGA TERM 1575 2006547 - 2006566 + F 100 -15 -4.77442 | opp_overlap 2006540, overlap 2006543 CGATAAAGGCGGAGA CGGGCAGC GCAA GCTGCCCG TTTCTTTATTGTGTT XOO1903 2006608 - 2007351 + | hypothetical protein XOO1904 2007387 - 2007995 + | hypothetical protein XOO1905 2008055 - 2008249 + | hypothetical protein acvB 2008319 - 2009689 + | virulence protein TERM 1576 2009867 - 2009836 - T 76 -7.8 -4.3739 | GAGCGGCTGACAAAA CGACTGCGCTCACC GCCA GGCAGGCGCGGCCG GTACTCGGAATCGGC XOO1907 2012877 - 2010313 - | hypothetical protein TERM 1577 2010484 - 2010467 - G 72 -8.3 -4.17516 | CTGAAACCATAGAAA CGCTCGC CGTG GCGCGCG ACCAGGCTGGCGAAG TERM 1578 2010775 - 2010805 + g 77 -5.3 -4.68384 | overlap 2010777 GTCCGCATCGAAGCT GCCCAGCGAAAAG CCTTT CTCTTCGCCGGAC TTTTCTTCCATCCAT XOO1908 2012946 - 2013311 + | hypothetical protein XOO1909 2013290 - 2013847 + | hypothetical protein XOO1910 2013825 - 2014205 + | hypothetical protein XOO1911 2015438 - 2014368 - | hypothetical protein TERM 1579 2014545 - 2014561 + g 87 -4.3 -5.2112 | overlap 2014547 GCGGTCCTGGTTTTC CAGCCAG GCG TTGGCGG TTTTTTCGTAATGTT XOO1912 2016238 - 2015456 - | hypothetical protein XOO1913 2016780 - 2016235 - | hypothetical protein cfaA 2018072 - 2016777 - | cyclopropane-fatty-acyl-phospholipid synthase XOO1916 2020275 - 2018953 - | dehydrogenase desC 2021348 - 2020200 - | delta 9 acyl-lipid fatty acid desaturase TERM 1580 2021409 - 2021381 - R 90 -15.3 -3.72576 | overlap 2021382 CGGTTTTCGATGAAA TCCCGCTTGCGAA GCG CTCGCAAGCGGGG TCAGGCGTGCCGAAT TERM 1581 2021408 - 2021382 - R 91 -18.8 -2.83403 | overlap 2021381 GGTTTTCGATGAAAT CCCGCTTGCGAA GCG CTCGCAAGCGGG GTCAGGCGTGCCGAA XOO1918 2022269 - 2021424 - | hypothetical protein rpoE 2022817 - 2022254 - | RNA polymerase sigma factor XOO1921 2024112 - 2023330 - | hypothetical protein TERM 1582 2023716 - 2023758 + g 90 -15.5 -3.64703 | gap 1 ACCCGGCGTCGATCA CCCGCGCGCCGGCGCCAGGC GGCA GCGTGGTGC-GGCGTTCGGG TTTGCCTGGAGCGAG ydgM 2025201 - 2024731 - | ferredoxin XOO1923 2025832 - 2025161 - | hypothetical protein metG 2028056 - 2025972 - | methionyl-tRNA synthetase TERM 1583 2028254 - 2028237 - R 100 -10.5 -5.31275 | GGCCAGCACAAAAAA GGCGCCC CGAA GGACGCC CGCTCTTAACGATTC XOO1925 2028760 - 2028281 - | hypothetical protein XOO1928 2029494 - 2030552 + | putative transposase ykfD 2030824 - 2032221 + | S-methylmethionine transporter mmuM 2032218 - 2033195 + | homocysteine methyltransferase TERM 1584 2033255 - 2033232 - T 77 -13.2 -3.56092 | gap 1 CGACCAGCCTGCAAA GCTGG-GACGG TGC CCGTCGCCAGC GGCTGGCGAGGCGGT XOO1931 2035314 - 2033377 - | hypothetical protein TERM 1585 2035687 - 2035720 + r 86 -13.7 -3.90586 | TGCCGATTCCGAGCA CCGGCCGCGCCCGCC TGGC GGTGAGCGCAGTCGG TTTATCAGCTGCTCT XOO1932 2036511 - 2035735 - | hypothetical protein XOO1933 2037190 - 2036516 - | hypothetical protein TERM 1586 2037541 - 2037590 + G 72 -12.7 -3.06815 | gap 1 CCCGAGGCGCAGCCT CAGGCGCTGGCGCAGCTGCGTCAG CCG CTGCCGCCGTTGCGC-GGCGCCAA TATGTTCCAAGCGCT XOO1934 2037424 - 2038932 + | hypothetical protein XOO1937 2039213 - 2040211 + | IS1478 transposase TERM 1587 2041799 - 2041768 - T 95 -15.1 -4.07687 | ATGGCCGCGCGAAAA CGCCCGACCTGCG TGGCAT CGCAGGGCAGGCG CGGCTCATAGAACGC nodQ 2044694 - 2044464 - | ATP sulfurylase/adenylylsulfate kinase TERM 1588 2045935 - 2045950 + H 74 -4.6 -4.55697 | GGCGTTGGAGATCTC GCGCTG GCCA CAGGGC TTTGTTTGTCCGCGT TERM 1589 2046669 - 2046685 + G 74 -10.1 -3.70902 | opp_overlap 2046664, overlap 2046670 CTGGCAGAGACGATG TGGCGGT TCA ACCGCCG TTTCGATCTGACCCG XOO1949 2046339 - 2046800 + | transposase XOO1950 2047247 - 2046801 - | IS1478 transposase TERM 1590 2046881 - 2046850 - G 95 -15.1 -4.13945 | ATGGCCACGCGAAAA CGCCCGACCTGCG TGGCAT CGCAGGGCAGGCG CGGCTCATAGAACGC XOO1951 2047829 - 2047266 - | hypothetical protein TERM 1591 2048146 - 2048112 - R 71 -10.8 -3.47573 | opp_overlap 2048120, overlap 2048109 2048120 GCACGTAGAGCACAA TAAAAAAATCCCCGGC TGT GCCGCGGATTTCATTA TTACTTGGAGCGGCT TERM 1592 2048120 - 2048138 + r 81 -10.2 -4.11412 | opp_overlap 2048112 2048109 2048120 AGCACAATAAAAAAA TCCCCGGC TGT GCCGCGGA TTTCATTATTACTTG TERM 1593 2048138 - 2048120 - R 100 -10.2 -5.89921 | opp_overlap 2048120, overlap 2048112 2048109 AGCACAATAAAAAAA TCCCCGGC TGT GCCGCGGA TTTCATTATTACTTG TERM 1594 2048250 - 2048281 + r 95 -11.4 -4.63932 | GCCGATTCCGAGCAC CGGCCGCGCCCGCC TGGC GGTGAGCGCAGTCG TTTTGTTAGCCGCTC XOO1952 2049618 - 2048302 - | PHB depolymerase TERM 1595 2049422 - 2049433 + g 79 -7.2 -4.46404 | TCGACATCGTCGAGC GCCC AGGC GGGC TTTTCGTATTCCTTG XOO1953 2050403 - 2049786 - | hypothetical protein XOO1954 2050369 - 2050908 + | hypothetical protein XOO1956 2053417 - 2052074 - | hypothetical protein TERM 1596 2053096 - 2053149 + gTr 72 -8 -4.13767 | gap 3, overlap 2053097 TGCGCGTGACACCGA GCTCGCCGCGGCCCAGCTCGTAAGCGG CAA TCGCG-GCG-GCGGGGCC-CGGCGGGG TTTTCAACTGCGCCG XOO1957 2054766 - 2053354 - | hypothetical protein TERM 1597 2053498 - 2053522 + gr 74 -9.9 -3.6944 | overlap 2053497 CCGCCAGGGCGGGAT CGCCTGCCACT GCA AGTTGCCGGCG TATTTGTCTTCGAGC XOO1958 2055500 - 2054763 - | ABC transporter ATP-binding protein TERM 1598 2055108 - 2055095 - G 71 -9.5 -3.72576 | TGCCCTTGGAGTAAA CCGCC ACCC GGCGG TCGTGCGCGTCGCCG TERM 1599 2055117 - 2055162 + g 89 -18.2 -3.14463 | overlap 2055118 2055155 CCGGCGGTCGTGCGC GTCGCCGGCCAGGCCGCTGC CGTCGA GCAGGGCCCTGGCCTGCGGC TTGGTCAGCGCGATT XOO1959 2057680 - 2055500 - | Outer membrane receptor proteins, mostly Fe transport TERM 1600 2057667 - 2057679 + g 78 -3.3 -4.87665 | overlap 2057669 2057669 GGATTATAAATAATT TGTCC TGC GGCCA TTTTTATAAATGCCC TERM 1601 2057905 - 2057872 - H 86 -13.1 -4.07568 | GTCGTCCCTGCAAAA CCCCGCTACCCGGCA TGAA CACAGGGTAGCAGGG GCGCCGATCCCCCCA TERM 1602 2058296 - 2058327 + G 81 -11.6 -4.11394 | gap 1 GTGTTCTATGCGCCG CGCCTGCCCTGCGAT GCC AT-GCAGGTCGGGCG TTTTCGCGCTGCCAT TERM 1603 2058369 - 2058419 + G 76 -5.8 -4.56597 | opp_overlap 2058365, overlap 2058370 GGGGCGAGGAATGGC TCAAGGCCACCATCGACACCGCGG TGT CCTCGCTGTCACTGGGGGCCGGGG TTTTTCAGGAGCGAA XOO1960 2058089 - 2058535 + | IS1478 transposase accA 2059479 - 2058520 - | acetyl-CoA carboxylase carboxyltransferase subunit alpha dnaE 2063245 - 2059655 - | DNA polymerase III subunit alpha TERM 1604 2062271 - 2062287 + g 100 -10.1 -5.0133 | GTCCTGGCGCGTCTT GCCCGGT GCA ATCGGGC TTTTTTCCAGACGTG TERM 1605 2063116 - 2063141 + g 93 -11.1 -4.62069 | overlap 2063111 CGATTTCGACGGCCC GGCTCAGCAGG TTGG CCTGCTTGGCC TTTTTCGGGTCAGCC rnhB 2064461 - 2063703 - | ribonuclease HII TERM 1606 2064333 - 2064275 - G 84 -17.3 -2.73875 | opp_overlap 2064302, overlap 2064272 TCGGGTCGAACACCA CGGCGGCGACGGCGACG-GGGCCAGCGAG CGG CCCGC-GGCCCGCTTCATCGACGCCGGCG ACCAAGAGCCGGGAT lpxB 2065738 - 2064440 - | lipid-A-disaccharide synthase TERM 1607 2065096 - 2065154 + g 80 -13.9 -3.38522 | opp_overlap 2065111 2065139, overlap 2065142 GCGCAGCATCGCGGT CGGCCTGGTAAGCG-ATATCGTCGGCCAT CGG ATGGCCGACGAAGCGCGCGT-CCACGCCG TGTTTGGCGTAAATC TERM 1608 2065138 - 2065111 - G 70 -13.6 -2.52464 | gap 1, opp_overlap 2065096 CGGCCTGGTAAGCGA TATCGTCGGCCAT CGG ATGGCCGACGA-A GCGCGCGTCCACGCC TERM 1609 2065201 - 2065220 + g 71 -7.8 -4.08692 | opp_overlap 2065196 2065201 2065203 ACAGGCACAACACCA GATCGGCG CTGA CGGCGATC TTTTCGGCACGCTTC lpxA 2066526 - 2065735 - | UDP-N-acetylglucosamine acyltransferase TERM 1610 2066216 - 2066230 + g 74 -12.8 -3.21218 | GTGATGCCGCCGCCA CCGCGG GTG CCGCGG TTGATGGTGACGAAT fabZ 2067011 - 2066550 - | (3R)-hydroxymyristoyl-ACP dehydratase lpxD 2068021 - 2067008 - | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase TERM 1611 2068372 - 2068407 + r 95 -19.1 -3.50219 | opp_overlap 2068374, overlap 2068374 2068377 CAGGGTGTTCAAACA AACAATGGCGGCCCG AGTATC CGGGCCGCCATTGTG TTGTGTGCCAATCTT TERM 1612 2068405 - 2068374 - R 100 -22.4 -4.41348 | opp_overlap 2068372 2068374 2068377 GGGTGTTCAAACAAA CAATGGCGGCCCGA GTAT CCGGGCCGCCATTG TGTTGTGTGCCAATC TERM 1613 2068374 - 2068405 + r 100 -21.7 -3.32202 | opp_overlap 2068374, overlap 2068372 2068377 GGGTGTTCAAACAAA CAATGGCGGCCCG AGTATC CGGGCCGCCATTG TGTTGTGTGCCAATC TERM 1614 2068377 - 2068402 + r 100 -17.6 -3.79874 | opp_overlap 2068374, overlap 2068374 2068372 TGTTCAAACAAACAA TGGCGGCCCG AGTATC CGGGCCGCCA TTGTGTTGTGTGCCA oma 2070874 - 2068421 - | outer membrane antigen XOO1969 2072217 - 2070871 - | hypothetical protein dxr 2073434 - 2072244 - | 1-deoxy-D-xylulose 5-phosphate reductoisomerase TERM 1615 2072424 - 2072412 - G 76 -9.1 -4.15044 | opp_overlap 2072411 2072410, overlap 2072420 2072422 CTGGCCCTGAAGAAA CGCTG AAA CAGCG ACTTCGTTGGCCGCG cdsA 2074264 - 2073437 - | phosphatidate cytidylyltransferase TERM 1616 2073985 - 2073968 - G 88 -8.3 -4.66833 | GCCGAAGGTGAAAAA GCGCAGC CACA GCAGCGC CAGCAACCACCACGC uppS 2075037 - 2074261 - | undecaprenyl pyrophosphate synthetase frr 2075597 - 2075040 - | ribosome recycling factor pyrH 2076500 - 2075778 - | uridylate kinase TERM 1617 2075961 - 2075979 + g 77 -12.4 -3.66732 | overlap 2075956 GGTCAGACTGTCGTA GCGCACCG CGT CGGTGTGC TTCTTCGGGTCCTTG TERM 1618 2076111 - 2076125 + g 72 -3.4 -4.59773 | opp_overlap 2076113, overlap 2076113 GGTGCCGGCGGCGAA GATCGC AAT GCGGCC TTTTTCCAGATGGCG TERM 1619 2076207 - 2076218 + g 70 -2.2 -4.62783 | GCTCATCACGCGCAC CTTG GCGC CGAG TTTTTCCAGTGCGTC XOO1975 2076934 - 2076557 - | hypothetical protein TERM 1620 2077025 - 2077042 + r 100 -14.1 -4.88736 | opp_overlap 2077025 GTGCAGGTAAAAAAA GCCGCGG CATG CCGCGGC TTTTTCTGAGTGGTG TERM 1621 2077042 - 2077025 - R 100 -14.1 -5.47218 | opp_overlap 2077025 GTGCAGGTAAAAAAA GCCGCGG CATG CCGCGGC TTTTTCTGAGTGGTG tsf 2077940 - 2077062 - | elongation factor Ts TERM 1622 2077833 - 2077854 + g 71 -7.9 -4.08767 | gap 1 GCGCAGCCACTCGGC CGC-GGCGTC GAT GTCGCCTGCG TTTTCGACGAGTGCC TERM 1623 2078071 - 2078098 + r 90 -18.5 -3.06831 | overlap 2078061 GGGCACCGTCGGGGA TGCGGCCGCAC AGCATG GTGCGGCCGCA TTGCATGCCGATTAC TERM 1624 2078116 - 2078134 + r 82 -5.8 -4.8543 | overlap 2078120 GCATGCCGATTACTC GGCAGCCG GAG CGTCGGCC TTTTTCTCGCCCTTC rpsB 2078913 - 2078110 - | 30S ribosomal protein S2 TERM 1625 2079262 - 2079250 - R 71 -4.8 -4.40804 | CACCAGTCCACAAAA CGGT CAGCC ACCG GAAGGCACTCTACCA XOO1978 2080020 - 2079289 - | pili assembly chaperone XOO1979 2081430 - 2080396 - | hypothetical protein fasD 2083778 - 2081427 - | outer membrane usher protein FasD ecpD 2084577 - 2083795 - | pili assembly chaperone pru 2085158 - 2084574 - | protein U map 2085418 - 2086194 + | methionine aminopeptidase TERM 1626 2086677 - 2086720 + GF 100 -17.6 -4.15044 | gap 2 GCTGCGCGCGCTGCA TTG-GCGGCGGCCAT-CGCG CCGCAA CGCGTATGGCCGCCGCGCGA TTTCTTCCAGGCCAA TERM 1627 2087127 - 2087083 - gf 81 -2.8 -5.00616 | gap 1, opp_overlap 2087086 2087117, overlap 2087084 2087086 2087087 TGGGCGTGGAAAAAA TGATGCAGCGCTTTTATCGCA GCGC TGCGTTGATC-CGCCGCATCA GCGACCGTCTGCTAC TERM 1628 2088478 - 2088526 + GF 71 -10.2 -3.66178 | gap 1 TGCTGGCCGGCGACC TGCAGCAGGTGCGGCCGGCACGG CGTG CAGTGCCGGGC-CAGTTGCGGCA TTTCCGCTTCGCACC glnD 2086116 - 2088800 + | PII uridylyl-transferase TERM 1629 2088858 - 2088834 - f 71 -9.2 -3.75024 | overlap 2088837 GGCCACCAGCAAGAA GACCGCGCCC AAGCA GAGCGCGACC ACCAACAAGGCAACG TERM 1630 2088990 - 2088957 - f 86 -8.1 -4.56597 | gap 1, overlap 2088959 2088987 TGGCGTCGGCAAAAA GAGCGCTGCTGCCGGT GCT ATCGGCAGCAAGGC-C GCTGCACCGAGCGCT TERM 1631 2088989 - 2088959 - f 81 -11.8 -3.90048 | overlap 2088957 2088987 GCGTCGGCAAAAAGA GCGCTGCTGCCGGT GCT ATCGGCAGCAAGGC CGCTGCACCGAGCGC dapD 2089156 - 2090013 + | 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase TERM 1632 2090902 - 2090930 + GF 71 -10.2 -3.63515 | CGGCGCGGCGGCAAG CGCTGCGGGCGG CCGGC TTGCCCGAAGCG TTGTTGCCCCTGCCG TERM 1633 2091078 - 2091095 + GF 80 -14.1 -3.34013 | CCGGACGCGCAACGG CGCGGCG TTGG CGCCGCG TTGGTTGCAGCGGTC XOO1986 2089929 - 2091329 + | histone acetyltransferase HPA2-like acetyltransferase dapE 2091232 - 2092464 + | succinyl-diaminopimelate desuccinylase TERM 1634 2092685 - 2092656 - f 72 -13.7 -2.78395 | opp_overlap 2092661, overlap 2092661 AACGCCCAGGAATCA GAAAACCCGCATC GGCC GATGCGGGTTTTT TTATGGGTGTCATTT TERM 1635 2092680 - 2092661 - f 100 -13.6 -4.56607 | opp_overlap 2092661, overlap 2092656 CCAGGAATCAGAAAA CCCGCATC GGCC GATGCGGG TTTTTTTATGGGTGT TERM 1636 2092661 - 2092680 + F 100 -13.6 -5.65177 | opp_overlap 2092656 2092661 CCAGGAATCAGAAAA CCCGCATC GGCC GATGCGGG TTTTTTTATGGGTGT asnB 2092759 - 2094453 + | asparagine synthetase B XOO1991 2095786 - 2094524 - | hypothetical protein fhuA 2098133 - 2096007 - | iron receptor TERM 1637 2096097 - 2096109 + g 79 -4.1 -4.89233 | GCTCACCGCATAGAC CTTGT CGA ACAGG TTTTTGATGTTGATC TERM 1638 2097385 - 2097405 + g 72 -6.7 -4.22652 | overlap 2097400 TCCACCGGCACGCCA CGTAGGCGG TTG CCGCCCAGG TTTTGGGTGATGTCG TERM 1639 2097644 - 2097656 + g 70 -2.6 -4.66609 | overlap 2097641 2097641 CCACGCGCCGCGCCG CCTG ATGGC CGGG TTTTTGCGTGACATA TERM 1640 2098579 - 2098561 - R 71 -13.8 -2.52464 | opp_overlap 2098577 GGGCGCTCCAAGGCA CGCGCGCC AGT GGCGCGCA ATCCGTGCCTCGTCG acyII 2101155 - 2098696 - | penicillin acylase II brf 2101191 - 2101745 + | bacterioferritin parC 2104444 - 2102201 - | DNA topoisomerase IV subunit A TERM 1641 2103139 - 2103165 + g 77 -12.3 -3.57387 | gap 1, overlap 2103158 GGATCTTCATTTCTT CCAGGC-GCGCC AGTT GGCGCAGCTTGG TTTCCAGGATGTATT XOO1997 2105356 - 2104505 - | transcriptional regulator TERM 1642 2105278 - 2105288 + g 72 -8.2 -4.10161 | ACGCGATCAGCACCG GGCC ATC GGCC TTTTCGAAGCTGGTG yybA 2105439 - 2105918 + | MarR family transcriptional regulator yjcP 2105915 - 2107432 + | outer membrane efflux protein pmrA 2107350 - 2108636 + | multidrug resistance efflux pump TERM 1643 2108658 - 2108701 + G 95 -15.8 -4.07568 | gap 1, overlap 2108689 ATGTCTTCGCAAGCT CCCACCGCGCCCGGCGGC-CC GGC GGCGCCGGCGCCCGCGGCGGG TTTTCGACCGGCCAG pmrB 2108643 - 2110223 + | multidrug resistance membrane translocase mlrB 2110274 - 2111008 + | MlrB XOO2005 2111964 - 2112212 + | hypothetical protein TERM 1644 2112341 - 2112310 - T 75 -4.4 -4.6759 | gap 1, opp_overlap 2112339 2112340, overlap 2112311 2112312 2112336 2112340 AAGAGCCCAACAAAA GC-GTCCTGGTGTTG CTG CAACACGAAGCCAGC GAGTTGCTCGCATTA TERM 1645 2112621 - 2112638 + T 75 -4 -4.79949 | overlap 2112616 2112622 GCTGGGCATAGGCCG CCGGCG TCATTC CGCCGA TTGTTTTTTTGGGGC XOO2008 2113542 - 2113417 - | IS1404 transposase XOO2010 2113792 - 2113658 - | transposase TERM 1646 2113789 - 2113773 - G 74 -10.1 -3.70902 | opp_overlap 2113768 2113785, overlap 2113774 CGGGTCAGATCGAAA CGGCGGT TGA ACCGCCA CATCGTCTCTGCCAG XOO2011 2114656 - 2113841 - | transposase TERM 1647 2114522 - 2114507 - G 74 -4.6 -4.55697 | ACGCGGACAAACAAA GCCCTG TGGC CAGCGC GAGATCTCCAACGCC XOO2012 2115192 - 2114701 - | IS30 family transposase tnpA 2115672 - 2115223 - | transposase XOO2015 2115723 - 2115986 + | hypothetical protein alg2 2116229 - 2117221 + | glycosyltransferase dxs 2119174 - 2117258 - | 1-deoxy-D-xylulose-5-phosphate synthase XOO2018 2120261 - 2119572 - | hypothetical protein TERM 1648 2120214 - 2120192 - G 73 -12 -3.36327 | opp_overlap 2120192 GGATCGCAGCGACAA CGCTGCCC GCGTCCG GGGCAGCG TTGCCTCCGGGGAAG XOO2019 2122320 - 2120527 - | acyl-CoA dehydrogenase TERM 1649 2122372 - 2122348 - R 76 -13.6 -3.14463 | gap 1 AAGCGGGTGCAGGAA GGCGTGC-GCG TTAG CGCAGCACGCC GTTGAGGCCGGGGGC XOO2020 2122834 - 2122358 - | hypothetical protein TERM 1650 2123242 - 2123259 + r 90 -8.4 -4.82901 | overlap 2123231 GCCGCGCCGCATGTC TCCGGC GTGTTG GCCGGA TTTTTATCGGCACGC TERM 1651 2123427 - 2123461 + r 70 -12.9 -2.91264 | gap 1, opp_overlap 2123434 TCGGGATTGGCCATT CGCAAGAGCTGCGGGG CTAG CCTCGCAGCTCT-GCA TGTGTGGATCGCAAG smpB 2124050 - 2123547 - | SsrA-binding protein XOO2024 2124111 - 2124542 + | hypothetical protein XOO2025 2124556 - 2124831 + | hypothetical protein TERM 1652 2125132 - 2125097 - T 74 -9.8 -3.68351 | opp_overlap 2125104, overlap 2125102 2125104 TTCCGACCATGCAAA CAAAAGACGCATCCGT TCGA AGGGATGCGTTCTTTG GTCATGCCGACACCC TERM 1653 2125127 - 2125102 - T 82 -6.1 -4.9138 | opp_overlap 2125104, overlap 2125097 2125104 ACCATGCAAACAAAA GACGCATCCGT TCGA AGGGATGCGTT CTTTGGTCATGCCGA TERM 1654 2125125 - 2125104 - T 73 -8.7 -4.07285 | opp_overlap 2125104, overlap 2125102 2125097 CATGCAAACAAAAGA CGCATCCGT TCGA AGGGATGCG TTCTTTGGTCATGCC TERM 1655 2125104 - 2125125 + T 73 -8.7 -4.0274 | opp_overlap 2125104 2125102 2125097 CATGCAAACAAAAGA CGCATCCGT TCGA AGGGATGCG TTCTTTGGTCATGCC smpA 2125573 - 2125178 - | outer membrane protein fur 2125636 - 2126088 + | ferric uptake regulator Fur TERM 1656 2126118 - 2126133 + TF 74 -11.8 -3.50047 | overlap 2126112 TGATGCGAATGGCAA GGCGGC TTCG GCCGCC TTATGCATTTGTGGG recN 2128333 - 2126531 - | recombination protein N TERM 1657 2128115 - 2128067 - Gf 75 -3.6 -4.83615 | CAGGCCGGACAAAAA GCCCAGCGCATCCACCATCAGC GACTT GCCGGTGCCGGTTTCGCCAGAC ACCACGGTCATGCCC hrcA 2128312 - 2129364 + | heat-inducible transcription repressor grpE 2129465 - 2129983 + | heat shock protein GrpE dnaK 2130125 - 2132050 + | molecular chaperone DnaK TERM 1658 2132066 - 2132113 + F 91 -19.3 -2.85668 | gap 1 GCCGTGATTTGGGAG TTGGGAACGGGGATTGGCAAGC GCTAA GCTCGCCGATCCCCGT-CCCGA TGTCCTCTACGCGTC TERM 1659 2132133 - 2132169 + F 81 -13.8 -3.55071 | gap 1, overlap 2132140 CTCTACGCGTCGCGT CGCCAAGGCGGACCAGC GCAC GCTG-TCCGCTTTCGCG TTTCAACGAATCTCA TERM 1660 2132140 - 2132162 + F 74 -9.9 -3.71649 | gap 1, overlap 2132133 CGTCGCGTCGCCAAG GCGGACCAGC GCAC GCTG-TCCGC TTTCGCGTTTCAACG TERM 1661 2132911 - 2132937 + G 76 -13.6 -3.052 | AGGGGAAGGCGAGGC TGGCCCGGCCGG CAC CCCGCCGGGCGA TCTGTATGTGGAAGT dnaJ 2132210 - 2133340 + | hypothetical protein TERM 1662 2133365 - 2133394 + F 100 -17.1 -5.55698 | opp_overlap 2133363 GATGAGGGAACGATG GCCCGGCGTGCGG CTTG CTGCGCGTCGGGC TTTTTTTGGGTTGTG TERM 1663 2133541 - 2133557 + F 78 -6.5 -4.65168 | overlap 2133535 TTGCAGCGACATCTA CGCACAT CGC AGGTGCG TTTTTGAAGTCTCGT TERM 1664 2134090 - 2134113 + G 100 -14.6 -4.24342 | CCTGCGCGGACGCAT TCTGCCAGCC GACT GGCTGGCGGA TTTGTTGCTGGGCGC pdxY 2133839 - 2134777 + | pyridoxine kinase tyrA 2134768 - 2135895 + | prephenate dehydrogenase XOO2035 2137647 - 2136265 - | putative ISXo8 transposase TERM 1665 2138257 - 2138279 + r 78 -10.4 -4.07568 | CGGCGCGCGCCTCGG CCACGCGGCC CTT GGCGGCGCGG TTTTCCAGCGGCACG XOO2037 2138956 - 2138855 - | outer membrane component of multidrug efflux pump oxyR 2139580 - 2138975 - | hydrogen peroxide-inducible genes activator draA 2141736 - 2139919 - | ABC transporter ATP-binding protein TERM 1666 2140515 - 2140556 + gr 72 -11.5 -3.53444 | gap 1 GCAGCATCGCCAGCA CCGTGCTCTT-GCCCGCCCC GGA GGGGCCGACCAAGGCCACGG TTTCGCCAGGGCTGA TERM 1667 2140924 - 2140882 - GR 71 -11.2 -3.40403 | CGCGCCTGACCACAA CACCGCGACGATCGCGCCGA AGA TCAGCATGATCGCCACCGCG GTGACGGTGGCCTGG TERM 1668 2140939 - 2140954 + gr 71 -10.4 -3.64103 | GGTGACGGTGGCCTG GGTGCG GATG CGCACC TTTGCGGTGTCGATG TERM 1669 2141383 - 2141394 + gr 76 -5.8 -4.56597 | overlap 2141366 TAGCCGGCCACGCAG GTCG GCGA CGAC TTTTTCGCCCAGCAG XOO2040 2142278 - 2141685 - | hypothetical protein XOO2041 2143139 - 2142546 - | hypothetical protein TERM 1670 2143273 - 2143245 - R 100 -15.4 -4.56775 | opp_overlap 2143247 2143250 ACTGGGCCTGAAAAA CATAACGCCGGA ATCTA CCCGGCGTTATG TCATGGCTGGGACAT TERM 1671 2143323 - 2143296 - R 70 -9.8 -3.59262 | opp_overlap 2143296 TGGGACATCGTCAAA GGCGGGAACCGC AGTT GCGATTCCCAAC TCCCGATTCCCGGCT ldp 2144774 - 2143338 - | dihydrolipoamide dehydrogenase sucB 2146218 - 2145016 - | dihydrolipoamide acetyltransferase TERM 1672 2145895 - 2145946 + g 91 -15.1 -3.84406 | overlap 2145896 CGCAGGCGCCGGTGC AGCGGCGGCAGCCGGC-GCGGCAGC TGGA GCTGCTGCTGCCGG-TGCGGCGGCC TTCTTCTCGTCCGCC TERM 1673 2145896 - 2145945 + g 89 -18.6 -2.90322 | overlap 2145895 GCAGGCGCCGGTGCA GCGGCGGCAGCCGGC-GCGGCAGC TGGA GCTGCTGCTGCCGG-TGCGGCGGC CTTCTTCTCGTCCGC kgd 2149089 - 2146261 - | alpha-ketoglutarate decarboxylase XOO2045 2150202 - 2149270 - | hypothetical protein XOO2046 2151740 - 2150199 - | hypothetical protein TERM 1674 2150683 - 2150649 - G 86 -15.6 -3.28924 | overlap 2150631 2150651 CAGGCCGCTGCAGAA CAGCGTGGCGCCGCGC TTG GCGCGCCGCCAGGCCA GCCGCGACCACGGGT TERM 1675 2150681 - 2150651 - G 93 -18.2 -3.21276 | overlap 2150631 2150649 GGCCGCTGCAGAACA GCGTGGCGCCGCGC TTG GCGCGCCGCCAGGC CAGCCGCGACCACGG XOO4794 2152007 - 2152297 + | hypothetical protein XOO2047 2153077 - 2152577 - | hypothetical protein purB 2154691 - 2153324 - | adenylosuccinate lyase TERM 1676 2153746 - 2153765 + g 71 -7.9 -4.11692 | opp_overlap 2153754 2153755 ACAGCGCGTTGGCGA TGCCGAA ATTGCC TTCGGCA TTTTCGAAGTCGATG TERM 1677 2155465 - 2155486 + G 77 -11.5 -3.74693 | TTCCGGCGGTTGGCG TCGCCGCGC GCAC GCGCGCCGA TTTCGTCGCCTGGCC XOO2049 2155146 - 2155904 + | hypothetical protein XOO2050 2156554 - 2155901 - | hypothetical protein XOO2051 2156667 - 2156858 + | putative transposase XOO2052 2156845 - 2157615 + | putative transposase XOO2054 2157697 - 2158134 + | transposase XOO2056 2159334 - 2158798 - | IS30 family transposase tnpA 2159679 - 2159365 - | transposase fumC 2159916 - 2161334 + | fumarate hydratase TERM 1678 2161401 - 2161418 + T 77 -2.6 -5.0133 | overlap 2161404 AAGCCCCATCGCGCT CAAGCC CGCGCC GGCCTG TTTTTTGCGACCCTG XOO2058 2161855 - 2161457 - | hypothetical protein XOO2059 2162531 - 2162265 - | hypothetical protein XOO2060 2163348 - 2162512 - | hypothetical protein TERM 1679 2163317 - 2163259 - G 83 -14.5 -3.28712 | gap 2, overlap 2163260 GCGTGGTTCGGAGAA TTTGCACTGCTCCTCTGCCGCTGCGGCTG CGG CTGCGGCTGCGGCAGAGG-GCAGTGCGC- ACACAATGGCCAAGC TERM 1680 2163317 - 2163260 - G 91 -20.5 -2.57132 | gap 1, overlap 2163259 CGTGGTTCGGAGAAT TTGCACTGCTCCTCTGCCGCTGCGGCTG CGG CTGCGGCTGCGGCAGAGG-GCAGTGCGC ACACAATGGCCAAGC XOO2061 2164344 - 2163358 - | hypothetical protein nodI 2165216 - 2164341 - | ABC transporter ATP-binding protein XOO2063 2165758 - 2165213 - | GntR family transcriptional regulator btuE 2165836 - 2166519 + | ABC transporter vitamin B12 uptake permease fkpA 2166575 - 2167576 + | FKBP-type peptidyl-prolyl cis-trans isomerase; rotamase ugd 2167602 - 2168951 + | UDP-glucose dehydrogenase TERM 1681 2168962 - 2168988 + G 80 -13.6 -3.35813 | opp_overlap 2168957 CATGAGCAACTCTCG CCGCGCGACCAG GCA CTGGAAGCGCGG TTGGTTGAACTGGAA TERM 1682 2169032 - 2169005 - g 71 -10.6 -3.66178 | gap 1, overlap 2169006 TGGTTGAACTGGAAA CGCGCCT-CTCCT TTC AGGAGCAGGCGCT TAACGAACTGAGTGA TERM 1683 2169031 - 2169006 - g 73 -14.1 -2.79492 | gap 1, overlap 2169005 GGTTGAACTGGAAAC GCGCCT-CTCCT TTC AGGAGCAGGCGC TTAACGAACTGAGTG TERM 1684 2169095 - 2169040 - g 73 -12.6 -3.34013 | gap 1, overlap 2169049 CAGGCGCTTAACGAA CTGAGTGAAGCACTTGCGGACGCCCGT TTG ACGGGCGCCCGCAA-TGCCGAACTGAT CCGCCACCTGCTCGA TERM 1685 2169086 - 2169049 - g 100 -22.9 -3.10677 | gap 1, overlap 2169040 AACGAACTGAGTGAA GCACTTGCGGACGCCCGT TTG ACGGGCGCCCGCAA-TGC CGAACTGATCCGCCA XOO4796 2168944 - 2169180 + | hypothetical protein XOO2067 2169181 - 2169933 + | hypothetical protein TERM 1686 2169962 - 2169981 + F 100 -11.4 -5.38047 | GAGGTGTGGTGTGCA TGGGCGCC TGCG GGTGCCCA TTTTTTGTGTGCGTG TERM 1687 2170231 - 2170241 + G 74 -2.4 -4.72497 | AGGCTTATCGTGCCG TGGC GTT GCCC TTTTCTTGCTCGCTC XOO2068 2170198 - 2171112 + | hypothetical protein TERM 1688 2172355 - 2172331 - g 71 -7.7 -4.07885 | opp_overlap 2172348, overlap 2172332 CAGTCGCCCTGAAAA TTCGCGCAAGC AGC GCCTGCGCGCC CGTAGCTCGCATGTC XOO2069 2171235 - 2172428 + | transcriptional regulator fucP 2172442 - 2173752 + | glucose-galactose transporter scrK 2173677 - 2174735 + | fructokinase TERM 1689 2174821 - 2174848 + G 72 -3.3 -4.6856 | overlap 2174822 CATGGCGTTCTACCA TCCGCGCGC GATCGATCCG GCGGGCGGG TTTTTCCAGTATTTC XOO2072 2174732 - 2175937 + | hypothetical protein TERM 1690 2175969 - 2175994 + T 83 -16.9 -2.63301 | overlap 2175966 2175965 2175971 GGAGCGTTGTTTCCG GATCGCCGGGT GTTT GCCCGGCGATC TGGTGTCAGCGTCTC TERM 1691 2175971 - 2175992 + T 74 -13.7 -2.85668 | overlap 2175966 2175965 2175969 AGCGTTGTTTCCGGA TCGCCGGGT GTTT GCCCGGCGA TCTGGTGTCAGCGTC metH2 2179077 - 2176324 - | 5-methyltetrahydrofolate-homocysteine methyltransferase TERM 1692 2176551 - 2176563 + g 75 -3.3 -4.74453 | CTGCATCGAGCAGAT CGAAC AAG GTGCG TTTTTCGCTGTGTTC TERM 1693 2176954 - 2176996 + g 74 -13.4 -3.18383 | opp_overlap 2176951 2176954 ATGGGGAATGGAGAA TCGGGAATGGTCGAGCGCGG GGG CATCGCTTGGCGATTCCCGA TTCCTGACTCCCGAT TERM 1694 2178400 - 2178379 - G 71 -3.7 -4.58773 | gap 1, overlap 2178384 2178393 GCCACGAAACGAAAA CGACA-CGTT GGA AACGCCGCCG GACACATGGCAATGC metH 2180359 - 2179220 - | 5-methyltetrahydrofolate-homocysteine methyl transferase XOO2075 2181351 - 2180356 - | transcriptional regulator TERM 1695 2181355 - 2181380 + GH 76 -8.5 -4.18018 | opp_overlap 2181355 TTCCAGATCCATGAA TATCTCTATAT CGCG ATATGGAGATA TTTTCGGTCCGGCGG acdA 2181302 - 2182621 + | acyl-CoA dehydrogenase TERM 1696 2182630 - 2182670 + G 100 -32.8 -3.04144 | GCGCTGATGCACGCC GCGCTCCAGCGTTGCCGC CGCGC GCGGCAACGCTGGAGCGC TCTTCGCGATGCCAC acdA 2182621 - 2182761 + | acyl-CoA dehydrogenase TERM 1697 2182808 - 2182777 - f 89 -11.4 -4.3739 | GAGCGGCTGACAAAA CGACTGCGCTCACC GCCA GGCGGGCGCGGCCG GTGCTCGGAATCGGC TERM 1698 2183320 - 2183310 - g 74 -2.4 -4.8269 | overlap 2183311 CAGAACTACGAAAAA GCCG AGG CGCC GGACGAAGACTTTCA TERM 1699 2183574 - 2183561 - g 72 -3.1 -4.68384 | gap 1 AGCGATCGAACAAAA GC-TGC CGC GCACGC ACATCCTGTTGCTGA XOO2079 2183040 - 2184578 + | acetylhydrolase TERM 1700 2184933 - 2184900 - f 76 -6.7 -4.4715 | opp_overlap 2184906, overlap 2184906 TTCGAACCCAGAAAA CCAGAAGACCCCCGA TCGC TCGGAGGTCTTTTTA AACTGGTGCCCAGAA TERM 1701 2184927 - 2184906 - f 78 -12.3 -3.72405 | opp_overlap 2184906, overlap 2184900 CCCAGAAAACCAGAA GACCCCCGA TCGC TCGGAGGTC TTTTTAAACTGGTGC TERM 1702 2184906 - 2184927 + F 95 -10.1 -4.63527 | opp_overlap 2184906 2184900 CCCAGAAAACCAGAA GACCCCCGA TCGC TCGGAGGTC TTTTTAAACTGGTGC TERM 1703 2185690 - 2185660 - g 71 -8.1 -4.09739 | GCAACTGGTGCAAAA CCGCCGCGGCGGC TATGC GCCGGTGCAGCAG ACCAGCCTGATCGCT TERM 1704 2185871 - 2185912 + G 78 -3.4 -4.96848 | overlap 2185847 CGCGAAGGTGCGATT GCGCGCGTGCTTGAGCGG GGCATG TCGCGCATGCTGGGGCGC TTTTTCTATGAGCAC vacB 2185145 - 2187673 + | RNase R XOO2081 2188360 - 2187884 - | putative transposase XOO2082 2188697 - 2188326 - | hypothetical protein XOO2083 2189085 - 2189420 + | hypothetical protein XOO2084 2189753 - 2190520 + | tRNA/rRNA methyltransferase TERM 1705 2191727 - 2191738 + G 76 -2.2 -4.8622 | overlap 2191725 GACGAGTTGCAGAGC TGCG AGGC TGCA TTTTTCATTGCCGCC XOO2085 2191028 - 2191996 + | putative transposase XOO2086 2193337 - 2192204 - | putative ISXo8 transposase XOO2087 2193811 - 2193350 - | transposase TERM 1706 2193481 - 2193465 - G 74 -10.1 -3.70902 | opp_overlap 2193460, overlap 2193466 CGGGTCAGATCGAAA CGGCGGT TGA ACCGCCA CATCGTCTCTGCCAG XOO2088 2194367 - 2193789 - | transposase TERM 1707 2194215 - 2194200 - G 74 -4.6 -4.55697 | ACGCGGACAAACAAA GCCCTG TGGC CAGCGC GAGATCTCCAACGCC XOO2089 2194638 - 2194399 - | putative ISXo8 transposase TERM 1708 2194896 - 2194869 - R 70 -12 -3.12668 | gap 1 GAGGCGGAGATGCAA GCCCATGTGG-GC CAT GCGCCGCATGGGC GCTCAGGCGGCAACG TERM 1709 2195805 - 2195829 + r 76 -5.7 -4.59773 | opp_overlap 2195808 GCGTATTTTCCCCAA CGACGATTCGG CGC TCAAATCGTTG TTTTTGGCCGTGCGC XOO2092 2197476 - 2196001 - | IS1478 transposase TERM 1710 2196119 - 2196108 - G 70 -2.2 -4.61231 | CCATAGGCGCAAAAA GACC CTTC AGTC CCAGACGCACCATGG TERM 1711 2197110 - 2197079 - G 95 -15.1 -4.07687 | ATGGCCGCGCGAAAA CGCCCGACCTGCG TGGCAT CGCAGGGCAGGCG CGGCTCATAGAACGC XOO4797 2197980 - 2197798 - | integral membrane protein TERM 1712 2197919 - 2197938 + g 78 -10 -4.02022 | gap 1, opp_overlap 2197898, overlap 2197935 TCGCCGCCACCGTTG GGCG-TGGC GAA GCCAACGCC TTTGTGATCATTCCA metX 2199328 - 2198129 - | homoserine O-acetyltransferase TERM 1713 2198388 - 2198443 + g 75 -9.6 -3.96624 | gap 1, opp_overlap 2198374, overlap 2198389 2198419 ACGCCGGTCTCCGAC TTGGCGGCGGGCA-GGGCATCTGCACC GGG GCTGTCGATGCCCATGTCGGCGGCCGG TTTGTCATCGACATA XOO2094 2199460 - 2200137 + | putative ISXo8 transposase TERM 1714 2200888 - 2200899 + G 76 -2.2 -4.8622 | overlap 2200886 GACGAGTTGCAGAGC TGCG AGGC TGCA TTTTTCATTGCCGCC XOO2095 2200189 - 2201157 + | putative transposase TERM 1715 2202048 - 2202059 + G 76 -2.2 -4.8622 | overlap 2202046 GACGAGTTGCAGAGC TGCG AGGC TGCA TTTTTCATTGCCGCC XOO2096 2201349 - 2202317 + | putative transposase XOO2097 2202428 - 2202610 + | putative ISXo8 transposase XOO2098 2203073 - 2202597 - | putative transposase XOO2099 2203458 - 2203039 - | putative transposase XOO4798 2203466 - 2203573 + | putative ISXo8 transposase TERM 1716 2203722 - 2203737 + G 74 -4.6 -4.55697 | GGCGTTGGAGATCTC GCGCTG GCCA CAGGGC TTTGTTTGTCCGCGT TERM 1717 2204455 - 2204471 + G 74 -10.1 -3.70902 | opp_overlap 2204450, overlap 2204456 TTGGCAGAGACGATG TGGCGGT TCA ACCGCCG TTTCGATCTGACCCG XOO2100 2203570 - 2204586 + | transposase XOO2101 2204580 - 2204711 + | putative ISXo8 transposase XOO2102 2204852 - 2205148 + | putative ISXo8 transposase XOO2104 2205308 - 2205778 + | ISxac1 transposase XOO2105 2205779 - 2206012 + | ISxac1 transposase XOO2106 2206661 - 2206113 - | putative ISXo8 transposase XOO2107 2207832 - 2206816 - | transposase TERM 1718 2206947 - 2206931 - G 74 -10.1 -3.70902 | opp_overlap 2206926, overlap 2206932 CGGGTCAGATCGAAA CGGCGGT TGA ACCGCCA CATCGTCTCTGCCAA TERM 1719 2207680 - 2207665 - G 74 -4.6 -4.55697 | ACGCGGACAAACAAA GCCCTG TGGC CAGCGC GAGATCTCCAACGCC XOO2108 2208925 - 2207888 - | putative transposase XOO2109 2209007 - 2209270 + | putative transposase XOO2110 2209242 - 2209724 + | putative transposase XOO2111 2210562 - 2209699 - | putative ISXo8 transposase XOO2112 2210531 - 2210917 + | IS1478 transposase XOO2113 2211900 - 2210914 - | IS1404 transposase XOO4799 2212016 - 2211753 - | IS1404 transposase XOO2114 2212901 - 2212203 - | TonB-like protein XOO2115 2213795 - 2213031 - | hypothetical protein TERM 1720 2213294 - 2213324 + g 72 -11.1 -3.53012 | gap 1, overlap 2213309 2213310 TCTGGCCCTCGATCG GCACCGGGCGATCG CCAC CGG-CGACCGGTGC TTTGGACGGCGCCGC serS 2213802 - 2215151 + | seryl-tRNA synthetase XOO2117 2215777 - 2215301 - | putative transposase XOO2118 2216285 - 2215743 - | putative transposase TERM 1721 2216408 - 2216389 - R 84 -11.4 -4.18674 | opp_overlap 2216382 2216389, overlap 2216382 CTGATACACAAACAA CGGGACCA GCAA TGGCCCCG TTTTTGTGTGTAAGA TERM 1722 2216389 - 2216408 + r 100 -9.2 -5.03994 | opp_overlap 2216389 2216382, overlap 2216382 CTGATACACAAACAA CGGGACCA GCAA TGGCCCCG TTTTTGTGTGTAAGA XOO2122 2219036 - 2218068 - | putative transposase TERM 1723 2218337 - 2218326 - G 76 -2.2 -4.8622 | overlap 2218327 GGCGGCAATGAAAAA TGCA GCCT CGCA GCTCTGCAACTCGTC acpD 2219684 - 2219100 - | acyl carrier protein phosphodiesterase XOO2124 2219784 - 2220797 + | transcriptional regulator XOO2126 2221800 - 2221976 + | integrase XOO2127 2225766 - 2222167 - | hypothetical protein TERM 1724 2222322 - 2222373 + gT 86 -11.7 -4.13945 | gap 3 CTGCCAGGTCGGCAG CGATGGGCGTACCAGGATCCGGGAGG CCG CC-CCCG-ATCCTGGTACG-CGGGCG TTTTACCCTCCAGCT TERM 1725 2222840 - 2222810 - GT 100 -13.2 -5.00616 | overlap 2222817 TGGCTCTGGAAAAAA CCAAGCACGCGCAC CAC GTGCGCGAGGTCGG CAACGCGATGGGACG TERM 1726 2222833 - 2222817 - GT 75 -13.7 -3.0166 | overlap 2222810 GGAAAAAACCAAGCA CGCGCAC CAC GTGCGCG AGGTCGGCAACGCGA XOO4801 2223613 - 2222999 - | hypothetical protein TERM 1727 2224778 - 2224737 - GR 71 -13.8 -2.62184 | gap 1, opp_overlap 2224734 2224746, overlap 2224746 GGGCCTGGCACAGCA CCGGCAA-CAGGCGCTGCA CCGTC TCCAGCGCCTGCTTGCCGC CAATATTGCTGGCGA TERM 1728 2225885 - 2225901 + r 78 -2.9 -5.0133 | overlap 2225869 2225887 GTGCTGACAGCGAGT TAGCCCA CTT TTGGCTG TTTTTTACACGAATC TERM 1729 2226171 - 2226156 - R 100 -11.8 -4.67038 | CCCTGAAAACCAAAA CCGGCC CAAG GGCCGG TCAGGTCTACGCGCT XOO2128 2230478 - 2226672 - | hypothetical protein TERM 1730 2226827 - 2226878 + g 81 -11.7 -4.13945 | gap 3 CTGCCAGGTCGGCAG CGATGGGCGTACCAGGATCCGGGAGG CCG CC-CCCG-ATCCTGGTACG-CGGGCG TTTTACCCTCCAGCT TERM 1731 2230597 - 2230613 + H 85 -2.9 -5.252 | overlap 2230581 2230599 GTGCTGACAGCGAGT TAGCCCA CTT TTGGCTG TTTTTTATACGAATC TERM 1732 2230916 - 2230890 - H 75 -14.4 -2.81173 | overlap 2230880 2230907 ACCAAGCCGAGCAGA GCGGCCAGCC GGGACAA GGCCGGCCGC TGACGCCCGAGCAGC XOO2129 2231026 - 2231874 + | transposase XOO2130 2233529 - 2232024 - | IS1478 transposase TERM 1733 2232142 - 2232131 - G 70 -2.2 -4.61231 | CCATAGGCGCAAAAA GACC CTTC AGTC CCAGACGCACCATGG TERM 1734 2233139 - 2233108 - G 95 -15.1 -4.07687 | ATGGCCGCGCGAAAA CGCCCGACCTGCG TGGCAT CGCAGGGCAGGCG CGGCTCATAGAACGC pthA1 2237881 - 2233670 - | avirulence protein TERM 1735 2233826 - 2233876 + g 85 -11.9 -4.13945 | gap 2 TGCCAGGTCGGCAGC CATGGGCGTACCAGGATCCGGGAGG CCG CC-CCCG-ATCCTGGTACGCGGGCG TTTTACCCTCCAGCT XOO2132 2239468 - 2238086 - | putative ISXo8 transposase XOO2133 2239615 - 2240178 + | hypothetical protein TERM 1736 2240842 - 2240817 - T 78 -10.5 -4.08216 | gap 1 TGACGGTCCCCAAAA GC-CCTTCTCCC ACC AGGAGAAGGTGC TCCGAAGGGGAGGAT TERM 1737 2241107 - 2241089 - T 71 -5.9 -4.32857 | opp_overlap 2241089, overlap 2241091 CGCCGTAAACACAAA CGCCTCC ACGAG GGATGCG TTTCGGGATCCGGGC XOO2136 2242322 - 2241237 - | hypothetical protein TERM 1738 2241457 - 2241434 - G 74 -14.6 -2.64155 | overlap 2241431 2241430 CCGGCCCCAAATGCA TGCCGGCACG CCAA CGTGCCAGCA CCGGCGCGATGCGCC TERM 1739 2242635 - 2242598 - R 100 -18.5 -3.53811 | opp_overlap 2242600, overlap 2242600 2242601 2242620 GGCAGCCGCTCCAAA CATCGACCGCGCTCACT AAGC AGTGAGCGCGGTCGCTT AGCTGAGCGTGCTCA TERM 1740 2242633 - 2242600 - R 95 -21.1 -3.34715 | opp_overlap 2242600, overlap 2242598 2242601 2242620 CAGCCGCTCCAAACA TCGACCGCGCTCACT AAGC AGTGAGCGCGGTCGC TTAGCTGAGCGTGCT TERM 1741 2242600 - 2242633 + r 93 -21.1 -3.06302 | opp_overlap 2242598 2242600 2242601 2242620 CAGCCGCTCCAAACA TCGACCGCGCTCACT AAGC AGTGAGCGCGGTCGC TTAGCTGAGCGTGCT TERM 1742 2242632 - 2242601 - R 100 -24.6 -2.60615 | opp_overlap 2242600, overlap 2242600 2242598 2242620 AGCCGCTCCAAACAT CGACCGCGCTCACT AAGC AGTGAGCGCGGTCG CTTAGCTGAGCGTGC XOO2137 2243346 - 2242648 - | enolase-phosphatase XOO2138 2243990 - 2243349 - | dioxygenase XOO2139 2244604 - 2243927 - | hypothetical protein yhdG 2246006 - 2244693 - | cationic amino acid transporter TERM 1743 2246188 - 2246168 - R 76 -9.6 -3.97709 | opp_overlap 2246170 ATCATTTAACAAGAA GGCCGGCG TCGCG CGCCGGTC TTGAGAGAGGGTTAG yhdG 2247738 - 2246200 - | cationic amino acid transporter XOO2142 2247818 - 2248405 + | hypothetical protein serA 2249802 - 2248561 - | D-3-phosphoglycerate dehydrogenase XOO2144 2250011 - 2251429 + | oxidoreductase XOO4806 2251464 - 2251622 + | hypothetical protein TERM 1744 2251615 - 2251633 + F 83 -7.4 -4.63218 | AGGTGGTGGCCGACG CCCGCT AAGATGC AGCGGG TTTTGTTGCCAGCGA XOO2145 2251760 - 2253631 + | hypothetical protein XOO2146 2253636 - 2253788 + | IS1404 transposase cycH 2254940 - 2253921 - | C-type cytochrome biogenesis protein TERM 1745 2254119 - 2254133 + g 84 -7 -4.82901 | overlap 2254121 GATGGTCAATGGCAG CTCGCG CAG CGCGTG TTTTTCTACCGCCAC TERM 1746 2254121 - 2254131 + g 72 -8.2 -4.03995 | overlap 2254119 TGGTCAATGGCAGCT CGCG CAG CGCG TGTTTTTCTACCGCC TERM 1747 2254243 - 2254256 + g 71 -3.8 -4.46854 | overlap 2254228 GCATCCAGCGTCACG CGCA CCCGGA TGCG TTTGTTGTTGACTGC cycL 2255365 - 2254934 - | C-type cytochrome biogenesis protein dsbE 2255964 - 2255362 - | C-type cytochrome biogenesis protein/thioredoxin cycK 2258026 - 2255957 - | C-type cytochrome biogenesis membrane protein TERM 1748 2256024 - 2255991 - G 83 -9.6 -4.37527 | gap 3, overlap 2255982 GGAGAACGACGAAAA CGC-CGGTCGGCCGCGG TCA CCA-GGCCG-CCGAGCG CCATCAGCAGCGCCC TERM 1749 2256166 - 2256137 - G 72 -11.3 -3.5525 | overlap 2256138 2256141 ATACAGGTCGCCAAA CGGACCGGGGCGG ATGG CCGCCTCGGTCAA GGTCTGCCCGCCGCT TERM 1750 2256175 - 2256193 + g 100 -12.4 -4.87665 | CGGTCAAGGTCTGCC CGCCGCTG GCA TAGCGGCG TTTTTCTGCATGCAC TERM 1751 2256901 - 2256860 - G 75 -12.3 -3.53444 | gap 1, overlap 2256890 CGAGCTGCCGGCAAA CGCGCGGCGCGGATCATC CACCAGC GACAA-CCGCGGCGCGCG CAGCGCATACAGCAC TERM 1752 2257713 - 2257701 - G 85 -7.7 -4.68424 | TAACGCACCGAAAAA TCCTG CAC CAGGA AGGCGTGCGTCAACA cycJ 2258533 - 2258063 - | cytochrome c-type biogenesis protein CcmE TERM 1753 2258310 - 2258347 + g 79 -7 -4.58395 | gap 1, overlap 2258311 TCGGTGACCCGGAAG TGCGC-TTCCAATGCGC CGGAC GCGCGTTGGAACGAGCC TTTTTCGACCATGCC XOO2152 2258700 - 2258530 - | hypothetical protein cycW 2260239 - 2259544 - | ABC transporter heme permease TERM 1754 2260074 - 2260050 - G 74 -12.8 -3.26722 | overlap 2260033 2260020 2260048 CCGACAGCCACAACA CCGCCGGCGC GGCCT GCGCCAGCAG GTCCGGGCGTCCGCC ccmA 2260934 - 2260236 - | cytochrome c biogenesis protein CcmA ybdL 2260996 - 2262255 + | putative aminotransferase TERM 1755 2262810 - 2262833 + G 71 -10.3 -3.68261 | opp_overlap 2262809, overlap 2262797 2262830 2262830 GGCTGGCGGATCAAT CCGCAGGTC TGCTAC GACTTGCGG TTTCCGGTGTTCTGC XOO2157 2262570 - 2263196 + | hydrolase XOO2158 2264233 - 2263217 - | transposase TERM 1756 2263348 - 2263332 - G 74 -10.1 -3.70902 | opp_overlap 2263327, overlap 2263333 CGGGTCAGATCGAAA CGGCGGT TGA ACCGCCA CATCGTCTCTGCCAG TERM 1757 2264081 - 2264066 - G 74 -4.6 -4.55697 | ACGCGGACAAACAAA GCCCTG TGGC CAGCGC GAGATCTCCAACGCC XOO2159 2265163 - 2264345 - | glutamine cyclotransferase XOO2160 2265279 - 2265716 + | hypothetical protein TERM 1758 2265902 - 2265885 - T 100 -12.7 -4.8269 | opp_overlap 2265885 CAGAACCACCAAAAA CGGCCCT TCGC AGGGCCG TTTTTTAATGCGCGT TERM 1759 2265885 - 2265902 + T 100 -12.7 -5.14965 | opp_overlap 2265885 CAGAACCACCAAAAA CGGCCCT TCGC AGGGCCG TTTTTTAATGCGCGT XOO2161 2267626 - 2265926 - | pseudouridylate synthase XOO2162 2268833 - 2267559 - | hypothetical protein TERM 1760 2267884 - 2267905 + gr 71 -8.7 -3.84719 | TCCTGCGCGTGCTGA TCGGCATCG ATGT CGGTGTCGA TTTCACTTTCAGGAT XOO2163 2269677 - 2268772 - | hypothetical protein XOO2164 2269816 - 2270328 + | hypothetical protein TERM 1761 2270420 - 2270446 + G 86 -13.6 -3.7108 | opp_overlap 2270401, overlap 2270424 GCGCCATGCCGGCCA TGCCGGCGCGCG CGA CGGGCGCGGGCA TTTCAATGTACGCGT XOO4807 2270325 - 2270681 + | hypothetical protein TERM 1762 2274253 - 2274226 - g 91 -16.4 -3.63991 | CAGTAGCGGCAATAA CCGCCAGGCATT CAAG AATGCCTGGCAG CCGCGTCTGGGCGCC XOO2166 2272370 - 2274601 + | hypothetical protein TERM 1763 2275581 - 2275555 - g 71 -7.3 -4.18494 | gap 1, overlap 2275556 TACTTGGATTCAAAA CGCCCCTCGAAG TCTT CTCCGAGGAG-G TCCTCAACAGCGTTG XOO2167 2274642 - 2275610 + | transposase TERM 1764 2275955 - 2275941 - gf 74 -5.6 -4.42238 | overlap 2275942 CGATGCGAAGGAAAA CCGCCA GTT CGGCGA GCACTACGCACTGGA XOO2168 2275543 - 2276406 + | hypothetical protein TERM 1765 2278086 - 2278038 - g 93 -18.8 -3.45737 | gap 2 GAAGGACGAGCAGAA GGCGGCCGC-GCGCGCG-CTGGGC ATG GCCGAGTCGCGTGCCGCCGCCGCC CAGGTCCAGCAAGAC XOO2169 2276509 - 2278128 + | hypothetical protein TERM 1766 2278312 - 2278284 - g 71 -7.3 -4.11216 | overlap 2278290 GGCCGACTTCGAAAA GCACAACCCCACG ATC CACGTGGATGTGC AGAACATCCCGATGA TERM 1767 2278873 - 2278834 - g 78 -4.2 -4.76644 | gap 1, opp_overlap 2278834, overlap 2278835 AACATGTATCAAAAA GGCTGGGCACCGAAGGTCT CCG AGACC-CAGGTGTCCAACG TCTGGTACGAATTCT TERM 1768 2279008 - 2278969 - g 85 -16.5 -3.07443 | gap 2, opp_overlap 2279000 CCACAGGGCATGGAA GGCCAGTGGGGCACCGCGC CGTT GC-CGG-GCCCCAATGGCC TGGGTGCCGGCATTG malE 2278132 - 2279502 + | ABC transporter sugar binding protein lacF 2279499 - 2280383 + | ABC transporter sugar permease lacG 2280380 - 2281216 + | ABC transporter sugar permease TERM 1769 2281647 - 2281633 - g 84 -7 -4.74706 | CGCAATATCGAAAAA GCCTGG GGA CCGGGC CAGGACAAGCAACTG TERM 1770 2282187 - 2282211 + G 71 -12.1 -3.28712 | opp_overlap 2282185 2282186, overlap 2282185 GCTGGCTGCACAACT GCCGCGTGG CAGTTAT CCGCGCGGC TTCTCCGGCGAGCAG TERM 1771 2283938 - 2283957 + G 78 -4.2 -4.72272 | gap 1, overlap 2283938 2283939 GGGCCGAAGTGGTCT C-GCGCACG CCG CGTACGCCG TTTTTCGTCGGCGAC XOO2173 2281213 - 2284377 + | hypothetical protein TERM 1772 2284396 - 2284378 - T 75 -14.6 -2.75064 | overlap 2284375 CGCGCCACGCAATGA GTCAGCCG CGG CGGCTGAC CCGGGCAGCGCCAGC traB 2286073 - 2284841 - | pheromone shutdown protein pat 2286593 - 2286054 - | phosphinothricin N-acetyltransferase XOO2176 2287524 - 2286598 - | beta-alanine synthetase TERM 1773 2287705 - 2287736 + r 72 -4.2 -4.63932 | opp_overlap 2287704, overlap 2287706 TGCCGTTCCGAACAC TGACCGGGCCCGCC TGGC GGTGAGCGCAGTCG TTTTGTTAGCCGCTC XOO2177 2288795 - 2287752 - | hypothetical protein TERM 1774 2288809 - 2288830 + r 76 -13.7 -3.20382 | overlap 2288810 AAATGCTCATCTTGG TGTGCGGGC CATC GCCCGCACG TTCATCGATATCCCA TERM 1775 2288810 - 2288829 + r 74 -15 -2.52015 | overlap 2288809 AATGCTCATCTTGGT GTGCGGGC CATC GCCCGCAC GTTCATCGATATCCC XOO2178 2289364 - 2289023 - | hypothetical protein TERM 1776 2289599 - 2289586 - H 100 -9.5 -5.4505 | opp_overlap 2289586 2289585 GCGGCCAAGAAAAAA CCGCC CGGA GGCGG CTTTCTCGGATCTTG TERM 1777 2289827 - 2289845 + H 77 -4.5 -4.95806 | opp_overlap 2289827, overlap 2289842 TGCACCCTGAATGAA GCCGG CAATTCTAA CCGGC TTTTTGTCGTGCTTT cmk 2289929 - 2290612 + | cytidylate kinase TERM 1778 2290687 - 2290659 - f 85 -14.5 -3.54459 | opp_overlap 2290662 GTAAGGCGTTCCAAA GCTCCGTCGCGCA TCC TGCGCGACGGTTC TACTACTCCTAAACC TERM 1779 2290662 - 2290684 + F 95 -19.2 -3.45023 | opp_overlap 2290659 AGGCGTTCCAAAGCT CCGTCGCGCA TCC TGCGCGACGG TTCTACTACTCCTAA rpsA 2290796 - 2292481 + | 30S ribosomal protein S1 TERM 1780 2292506 - 2292540 + F 77 -14.3 -2.91264 | gap 1 GCTCGCAAGCGCGTG ATGG-ATCGGCCCGGG CTTG CCCGGGCCGATTCCGA TGTGTCAGTCGAAAA ihfB 2292522 - 2292881 + | integration host factor subunit beta XOO2182 2292949 - 2293254 + | hypothetical protein XOO2183 2293261 - 2294439 + | hypothetical protein TERM 1781 2294891 - 2294915 + GF 74 -2 -4.77036 | CGGGCTGGCCAGCAG TCAGGCGGCA TTGGC TGCCTTCGGA TTTTTGCTGGTGGCG TERM 1782 2295244 - 2295258 + GF 76 -5.6 -4.53439 | overlap 2295246 GGCTTGAGACGCACG TTCCGG TAA CCGGCA TTTATTTCGCTTTCA rfb303 2294337 - 2295407 + | lipopolysaccharide core biosynthesis protein TERM 1783 2295468 - 2295484 + G 71 -12.3 -3.18849 | opp_overlap 2295466, overlap 2295466 CCTGCCGCAGATAGC GGTCGTG GTA CACGACC TATTGATGGTGTGGG XOO2185 2295421 - 2297328 + | epimerase; dehydratase protein TERM 1784 2297618 - 2297631 + G 78 -3.7 -4.82901 | overlap 2297594 2297619 CCATGCGTTGCCGGA AGGCG TTCG CGCCA TTTTTGTGACGCAGG TERM 1785 2298167 - 2298126 - g 88 -17.3 -3.05463 | overlap 2298158 ATCGGCCTGATCGAA GCCACCGTGCATTTCGCGC TCGA GCACGAAAAGCATGGCGGC CCAGCGAAGGAAATC galU 2297328 - 2298221 + | UTP-glucose-1-phosphate uridylyltransferase TERM 1786 2298245 - 2298270 + T 87 -19.1 -2.71731 | opp_overlap 2298249, overlap 2298249 TGATCGCTGTTTCCA CGAACGACGCC AGCT GGCGTCGTTCG TCGTTCAGGACTCGC TERM 1787 2298249 - 2298266 + T 74 -12.7 -3.27298 | opp_overlap 2298249, overlap 2298245 CGCTGTTTCCACGAA CGACGCC AGCT GGCGTCG TTCGTCGTTCAGGAC TERM 1788 2298266 - 2298249 - T 73 -12.7 -3.14132 | opp_overlap 2298249 2298245 CGCTGTTTCCACGAA CGACGCC AGCT GGCGTCG TTCGTCGTTCAGGAC XOO4808 2299624 - 2299343 - | hypothetical protein XOO2191 2301852 - 2300986 - | IS1478 transposase TERM 1789 2301822 - 2301810 - G 74 -4.8 -4.4773 | GTAGAGTAACGAAAA CTGG CAGTT CCAG CACGCCAAAACCGCA XOO2192 2302381 - 2302061 - | hypothetical protein folD 2302431 - 2303342 + | bifunctional methylenetetrahydrofolate dehydrogenase/ methenyltetrahydrofolate cyclohydrolase TERM 1790 2303635 - 2303611 - g 78 -15.7 -2.70932 | CGTCCTGCCCAAGGA CGTCAGCCTGG AAA CCCGGCTGACG CGCGACCTGCGCCTG guaB 2303531 - 2304988 + | inositol-5-monophosphate dehydrogenase TERM 1791 2305787 - 2305738 - g 85 -17.1 -3.06796 | overlap 2305740 GTGGACTGCAGCCAA CATCATCGACGACCAGATCGCGC GCGT GCGCGAACAGGTGGGCGATGACG ACGTGATCCTGGGCC TERM 1792 2305785 - 2305740 - g 82 -16.1 -3.09327 | overlap 2305738 GGACTGCAGCCAACA TCATCGACGACCAGATCGCGC GCGT GCGCGAACAGGTGGGCGATGA CGACGTGATCCTGGG guaA 2305067 - 2306680 + | bifunctional GMP synthase/glutamine amidotransferase protein XOO2196 2309236 - 2306825 - | hypothetical protein TERM 1793 2306952 - 2306941 - G 70 -2.2 -4.62069 | CGTCCAGCGCAAAAA GATG CAGC CACC GATTGTCGAACAGCG TERM 1794 2307362 - 2307305 - G 82 -16.1 -3.14564 | gap 1, overlap 2307359 GTAGTCGTGGAGGAA GGCCCGTCCCGCCAGGTCGCGCCCGGCG CTG CGC-GAGCGCGGCGCGGCGATAAAGGCC TGGCATCCTGCAAGC TERM 1795 2308716 - 2308704 - G 77 -4.7 -4.61633 | ACAGACTGTGAAAAA CCTGC GAG GCCGG CGATTTCGGGTGTCA XOO2197 2310857 - 2309286 - | NADH dehydrogenase TERM 1796 2309798 - 2309754 - G 75 -9.8 -3.96624 | gap 1, overlap 2309755 CAGTGCGATCAGAAA CGCGCGGCCGACCGCCGACCC ATTC GGAACCGCGACCGGCC-CGGG CCGGCGAATGGCCGC XOO2198 2310910 - 2311857 + | LysR family transcriptional regulator TERM 1797 2311995 - 2312029 + F 80 -6.2 -4.72497 | CGGTTCTGAGCGCGC CGTCCGCGCCCGCC TGGCGGT GGTGAGCGCAGTCG TTTTGTTAGTCGCTC TERM 1798 2312347 - 2312404 + F 71 -13.6 -2.63381 | gap 2, overlap 2312347 TTCCTACGTTGTAGG C-GTGA-GTCTCAGGTGTCCGCCTTGCG CGTG CACAAGACGGACACCTGAGAAATCGCAG CTGTTTGCAACTTTA XOO2199 2312409 - 2312855 + | hypothetical protein XOO2200 2314022 - 2312883 - | hypothetical protein ybhD 2314108 - 2314314 + | transcriptional regulator XOO2202 2314324 - 2315031 + | hypothetical protein TERM 1799 2315180 - 2315196 + T 83 -15.1 -3.18264 | opp_overlap 2315180 CGCACAAACAAAAAA GCCGCGC AGT GCGCGGC TTGATGCATGACCCG TERM 1800 2315196 - 2315180 - T 100 -15.1 -5.72622 | opp_overlap 2315180 CGCACAAACAAAAAA GCCGCGC AGT GCGCGGC TTGATGCATGACCCG XOO2203 2315832 - 2315227 - | hypothetical protein tlpC 2317767 - 2315875 - | methyl-accepting chemotaxis protein TERM 1801 2317670 - 2317638 - G 88 -11.2 -4.208 | gap 1 CCGGAAAATGAGAAA GTGGCGGCGTCCGGC ATCG GCCGGATGC-GCCTC GAACGGATCCATAAG smf2 2319469 - 2318063 - | manganese transport protein MntH XOO2206 2319541 - 2320008 + | manganese transport regulator MntR TERM 1802 2320319 - 2320341 + G 71 -12.7 -3.01712 | overlap 2320291 TGCGATGGCGATGAT CCATGCGCG GATCG CGCGCGTGG TGTTCGCCGCAAGCG XOO2208 2320005 - 2320517 + | hypothetical protein orn 2320590 - 2321174 + | oligoribonuclease TERM 1803 2321320 - 2321353 + T 100 -12.5 -4.66609 | opp_overlap 2321327, overlap 2321326 2321327 CGCCATCCACGCTCA CAAAAAAGCCGCATC ATCC GATGCGGCCTTTTCG TTTTTCACTGCGCTA TERM 1804 2321326 - 2321347 + T 100 -10.1 -4.78661 | opp_overlap 2321327, overlap 2321320 2321327 CCACGCTCACAAAAA AGCCGCATC ATCC GATGCGGCC TTTTCGTTTTTCACT TERM 1805 2321346 - 2321327 - T 100 -13.6 -5.252 | opp_overlap 2321327 2321326 2321320 CACGCTCACAAAAAA GCCGCATC ATCC GATGCGGC CTTTTCGTTTTTCAC TERM 1806 2321327 - 2321346 + T 79 -13.6 -3.4557 | opp_overlap 2321327, overlap 2321326 2321320 CACGCTCACAAAAAA GCCGCATC ATCC GATGCGGC CTTTTCGTTTTTCAC yggB 2322372 - 2321386 - | small conductance mechanosensitive ion channel ppsA 2324765 - 2322372 - | phosphoenolpyruvate synthase TERM 1807 2322954 - 2322966 + g 72 -3.3 -4.71426 | opp_overlap 2322954 2322955, overlap 2322929 2322955 GCTGGCGCCGCGAAA GCCGA TCA TCGGG TTTTCTTCATGCGGC TERM 1808 2325076 - 2325048 - g 90 -8.1 -4.88736 | gap 1 GATGATGCAGAAAAA GCGCGC-GACGC CGCGAT GCGTGTGCGCGC TGCGGGCGAGCGATA XOO2212 2324832 - 2325728 + | hypothetical protein XOO2213 2325934 - 2326443 + | hypothetical protein TERM 1809 2326448 - 2326474 + F 84 -13.6 -3.78953 | CCGTCGGCTGAGCCG GCGTTGCCGCGG CGT CCGCCGCACCGC TTTGGTCATACCGCT mutT 2326519 - 2327016 + | 7,8-dihydro-8-oxoguanine-triphosphatase TERM 1810 2327703 - 2327680 - f 78 -14.6 -3.0894 | gap 1, opp_overlap 2327679 TAACGATTCATTCAA GCCGACGCCGC TTC GCGG-GTCGGC CTAATTCCGGAGTTA TERM 1811 2328676 - 2328687 + G 76 -2.2 -4.8622 | overlap 2328674 GACGAGTTGCAGAGC TGCG AGGC TGCA TTTTTCATTGCCGCC XOO2215 2327977 - 2328945 + | putative transposase XOO2216 2329310 - 2330692 + | putative ISXo8 transposase XOO2217 2330923 - 2330759 - | putative transposase hbdH1 2331992 - 2331234 - | D-beta-hydroxybutyrate dehydrogenase TERM 1812 2331547 - 2331559 + g 70 -4.7 -4.37886 | AACCCATGTTTGGCG GCGAC ATA GGCGC TTTTATACGGGCTGG pssA 2331996 - 2332739 + | CDP-diacylglycerol-serine o-phosphatidyltransferase TERM 1813 2333265 - 2333279 + G 74 -4.9 -4.54727 | GGAAAACGCGCCGTG GCTGG ACATG CCGGC TTTTGGTTTGAACCG phaE 2332753 - 2334021 + | PHA synthase subunit phbC 2334018 - 2335094 + | poly (3-hydroxybutyric acid) synthase XOO2222 2335209 - 2335406 + | hypothetical protein TERM 1814 2335745 - 2335756 + T 74 -2.2 -4.82901 | CTGGGGCCGCTGTTT GTGC CGGT GTAC TTTTTGTGCGGCGGC XOO2223 2337060 - 2335849 - | oxidoreductase XOO2224 2337136 - 2337474 + | hypothetical protein TERM 1815 2338725 - 2338707 - g 91 -8.9 -4.79223 | GCAGACCATCAAAAA GTTGTGC ATGCA GCACAAC GTGGAGCTGATCGCG TERM 1816 2339264 - 2339225 - g 78 -13.6 -3.21593 | gap 1, overlap 2339236 GATTGGGCGACAAGA CCTTCGAACAATGCGCCGG CTT CCTGCGCATTGC-CGATGG CGACGAGCCGCTGGA TERM 1817 2339254 - 2339236 - g 71 -10.2 -3.63341 | overlap 2339225 AAGACCTTCGAACAA TGCGCCGG CTT CCTGCGCA TTGCCGATGGCGACG TERM 1818 2339356 - 2339372 + G 73 -5.8 -4.37092 | opp_overlap 2339356 AAGCCGATCAAGGCA CTGCTG GGCGA CGGCAG TTTTCTGCGCGGCCT TERM 1819 2339483 - 2339461 - g 100 -12.6 -4.62904 | overlap 2339451 2339462 AAAGAGCTGGAAAAA CCCGGCCGCG ATC CGCGTCCGGA GTTCAAGGCAGCGCA TERM 1820 2339482 - 2339462 - g 80 -13.9 -3.36658 | overlap 2339451 2339461 AAGAGCTGGAAAAAC CCGGCCGCG ATC CGCGTCCGG AGTTCAAGGCAGCGC tex 2337577 - 2339937 + | transcription-related protein XOO2226 2340149 - 2341207 + | putative transposase regR 2341825 - 2341259 - | two-component system regulatory protein regS 2343123 - 2341822 - | two-component system sensor protein TERM 1821 2342247 - 2342272 + g 89 -16.9 -3.28712 | CCAGCACTTCCTTCA CGGCCACCTCG CGGC TGAGGTGGCCG TTGTCGGCAGGCGCC TERM 1822 2343335 - 2343305 - g 76 -14 -3.17229 | overlap 2343303 2343306 AGTCGATGACCAACA CCGACACTGCCGAC ATT GCCGGCAGCGTCAA GCAGGTGGCCGATCT TERM 1823 2343334 - 2343306 - g 73 -15.3 -2.50016 | overlap 2343305 2343303 GTCGATGACCAACAC CGACACTGCCGAC ATT GCCGGCAGCGTCA AGCAGGTGGCCGATC TERM 1824 2343505 - 2343483 - g 70 -11.2 -3.41051 | CGACTTCCATTACAA CGGCCACCAG TTG CTGGCGGCAG AGCCGGCCTGCGCCG TERM 1825 2343703 - 2343693 - g 77 -8.2 -4.2828 | overlap 2343694 GCTGATGGACGAAAA CGCG CAG CGCG AAACGCCCTGGGATG TERM 1826 2344356 - 2344343 - g 81 -3.1 -5.03314 | gap 1 TCGATGGCGAAAAAA GCGTCA TCC TG-CGC GGCGAAAACATCGCT ispG 2343169 - 2344434 + | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase TERM 1827 2344580 - 2344561 - g 71 -7.8 -4.14739 | opp_overlap 2344576 CCACGCACTGGAAAA CGTCTACG TCTA CGTCGACG AGCCGCTGCTGTGGT TERM 1828 2344926 - 2344951 + G 77 -11.9 -3.65201 | gap 1 GGAACACGCGTTGGC GCTGGCCGGCGA CCA TTGCCG-CCAGC TTGTTCGCACTCTTG TERM 1829 2345076 - 2345109 + G 77 -15.1 -2.83715 | TGGTGATGTTCCGTG GCGCGCGGCGACCGC ACTG GCGCACGCCGAGCGC TGTGATGGTGGTAGA XOO2230 2344415 - 2345152 + | phosphatidylglycerophosphatase B-related protein proP 2346456 - 2345293 - | Prop transport protein TERM 1830 2347546 - 2347520 - g 71 -7.3 -4.18494 | gap 1, overlap 2347521 TACTTGGATTCAAAA CGCCCCTCGAAG TCTT CTCCGAGGAG-G TCCTCAAAAGCGTTG XOO2232 2346607 - 2347575 + | hypothetical protein XOO2235 2349221 - 2348460 - | integral membrane protein murB 2350387 - 2349365 - | UDP-N-acetylenolpyruvoylglucosamine reductase pyrD 2351470 - 2350415 - | dihydroorotate dehydrogenase 2 XOO2238 2352249 - 2351476 - | hypothetical protein XOO2239 2352620 - 2352246 - | hypothetical protein TERM 1831 2353096 - 2353072 - R 75 -15 -2.70932 | gap 1, opp_overlap 2353068 2353066 CGTGCCTGGCAACGA CCGCGTCCGCC TGAC GGCGG-CGCGG CGCTCTTGCTAGCCG XOO2240 2354651 - 2353119 - | aldehyde dehydrogenase TERM 1832 2354430 - 2354404 - G 78 -10 -4.03234 | overlap 2354405 GCCTCGCCACACAAA CGCACCGCCTCG CCG CGACGCGGCGCC GGCGTGGTCCGCCAT TERM 1833 2354429 - 2354405 - G 71 -13.5 -3.01726 | overlap 2354404 CCTCGCCACACAAAC GCACCGCCTCG CCG CGACGCGGCGC CGGCGTGGTCCGCCA tspO 2354985 - 2355275 + | tryptophan-rich sensory protein metL 2355922 - 2358462 + | bifunctional aspartokinase I/homeserine dehydrogenase I thrB 2358459 - 2359427 + | homoserine kinase TERM 1834 2359781 - 2359810 + T 74 -5.7 -4.52873 | gap 1 CGTCGCGTCCCAGTC CTGGCG-TTGCCGT GTC ACTGCAGGCGCTAG TTGTTTTTATCCCGA TERM 1835 2361747 - 2361723 - T 93 -18.6 -3.38272 | opp_overlap 2361723 CAGGAGCAGGCACAA TGCGCGCGCC GGGCA GGCGCGCGCA TTGATGAAGGGCCGT TERM 1836 2361723 - 2361747 + T 93 -18.6 -3.14211 | opp_overlap 2361723 CAGGAGCAGGCACAA TGCGCGCGCC GGGCA GGCGCGCGCA TTGATGAAGGGCCGT XOO2246 2362722 - 2362363 - | hypothetical protein TERM 1837 2362528 - 2362510 - G 72 -13.1 -3.16191 | opp_overlap 2362506 2362525 GCACATCCCGATGAA CGCCGGC GGGCT GCCGGCG TCGCCGCCGCTGATG thrC 2362839 - 2364143 + | threonine synthase XOO2248 2364168 - 2364989 + | hypothetical protein hisS 2366098 - 2367666 + | histidyl-tRNA synthetase TERM 1838 2368064 - 2368033 - T 100 -11.4 -5.41143 | opp_overlap 2368054 2368054 GAGCGGCTAAAAAAA CGACTGCGCTCACC GCCA GGCGGGCGCGGCCG GTGCTCGGAATCGGC XOO2252 2368647 - 2368183 - | putative transposase XOO2253 2368984 - 2368613 - | putative transposase TERM 1839 2369293 - 2369237 - H 71 -8.4 -3.94381 | gap 1, overlap 2369228 2369240 ACATAAGGTGACAAA CACCGT-CGATTGCGTTAATGTAATAA CACG CTATTACATTAACGCAATGAAACAACG ACCTGCCCTCCGCGA XOO2254 2369283 - 2369609 + | hypothetical protein TERM 1840 2369716 - 2369677 - g 71 -12.6 -3.24924 | overlap 2369675 TCGCCATCCAGAAGA GCGGCCGCCTGGCCGAGC CGGC GCGCAGCCTGCTGGCCGC CTGCGGGCTGAGCTG hisG 2369619 - 2370533 + | ATP phosphoribosyltransferase hisD 2370530 - 2371825 + | histidinol dehydrogenase TERM 1841 2372252 - 2372283 + GF 79 -10.2 -4.08974 | gap 1, overlap 2372255 TCCCGGCAATTGTGG CAGCGGCCTTGGCGT CGA ACGCCAAG-CTGGTG TTTCTATGCTCGCCT hisC 2371744 - 2372913 + | histidinol-phosphate aminotransferase hisB 2372910 - 2374037 + | imidazole glycerol-phosphate dehydratase/histidinol phosphatase hisH 2374034 - 2374636 + | imidazole glycerol phosphate synthase subunit HisH hisA 2374633 - 2375367 + | 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase TERM 1842 2375646 - 2375623 - g 74 -11 -3.57144 | gap 1 TTGGCGATGTGGAAA CGGCGCGT-GC GGT GCTACACGCCG GTGCCGACAAGATAT hisF 2375361 - 2376137 + | imidazole glycerol phosphate synthase subunit HisF hisI 2376127 - 2376747 + | bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein TERM 1843 2377146 - 2377200 + G 71 -7.7 -4.07568 | gap 2, opp_overlap 2377155 TGGGCAGACGGTGTT CGTGATCAAGCCG--GGCGATCGCCGC TTC GTGCCGGCCGCCGACGGCTTGCCCGCG TTTTGGCGCCACGAC XOO2263 2376838 - 2377245 + | hypothetical protein XOO2264 2380850 - 2377335 - | hypothetical protein TERM 1844 2377490 - 2377541 + g 81 -11.7 -4.13945 | gap 3 CTGCCAGGTCGGCAG CGATGGGCGTACCAGGATCCGGGAGG CCG CC-CCCG-ATCCTGGTACG-CGGGCG TTTTACCCTCCAGCT TERM 1845 2378008 - 2377978 - G 100 -13.2 -5.00616 | overlap 2377985 TGGCTCTGGAAAAAA CCAAGCACGCGCAC CAC GTGCGCGAGGTCGG CAACGCGATGGGACG TERM 1846 2378001 - 2377985 - G 75 -13.7 -3.0166 | overlap 2377978 GGAAAAAACCAAGCA CGCGCAC CAC GTGCGCG AGGTCGGCAACGCGA XOO2265 2382081 - 2381302 - | pectate lyase L precursor TERM 1847 2382320 - 2382356 + H 100 -15.9 -4.67755 | gap 1, opp_overlap 2382317 AGCCGCGCAAGAGTG CGGGCCAGCG-TCGGG CAGCCA CCCGACCGCTGACCCG TTTTTCACTGCCTAT TERM 1848 2382866 - 2382850 - H 71 -10.9 -3.53012 | TTTCGCTCTCCGAAA GGTATGC ATT GCATACC AAATAGGATACGCTG XOO2266 2383499 - 2384572 + | putative phage replication protein RstA TERM 1849 2385604 - 2385627 + F 100 -11.6 -5.28176 | opp_overlap 2385604, overlap 2385620 2385621 CGTGTTGTATCACAA GGGGCGCGCG GAAA CGTTCGCCCC TTTTTTCTAGGTGAA TERM 1850 2386355 - 2386343 - g 70 -5.5 -4.31835 | opp_overlap 2386343 AAGCCTGAGAACAAA TGCCC ACA AGGCA TGATTGCTGTGCAAG TERM 1851 2386605 - 2386595 - g 72 -3.2 -4.70879 | GGCAAAGGCGAAAAA GACG AAG CATC TGGTGGTGATGATTG XOO2267 2385734 - 2387170 + | hypothetical protein XOO2268 2387489 - 2388673 + | hypothetical protein TERM 1852 2390072 - 2390090 + F 81 -3.8 -5.03145 | overlap 2390074 CGACGACCACCTTTA CTGTTTGT TCC GCAAACCG TTTTTTCGCCGCTTC TERM 1853 2394219 - 2394238 + F 73 -8.6 -3.98214 | gap 1 TTGAACGTCCGCGGC CGTCGGAGA GCT TC-CCGACG TTTCTAATCGATGCT XOO2271 2394478 - 2394924 + | transposase TERM 1854 2395156 - 2395182 + GT 79 -6.5 -4.58283 | AAGTGGAGAGGCTGT TCCGTCGCTTG AAGGG CTACCGACGGA TTTTTCACGCGCTTC XOO2272 2394690 - 2395250 + | transposase XOO2273 2396126 - 2395719 - | transposase TERM 1855 2400843 - 2400792 - g 81 -11.7 -4.13945 | gap 3 AGCTGGAGGGTAAAA CGCCCG-CGTACCAGGAT-CGGG-GG CGG CCTCCCGGATCCTGGTACGCCCATCG CTGCCGACCTGGCAG pthA4 2396490 - 2400998 + | avirulence protein TERM 1856 2401499 - 2401514 + F 100 -11.8 -4.67038 | AGCGCGTAGACCTGA CCGGCC CTTG GGCCGG TTTTGGTTTTCAGGG TERM 1857 2405070 - 2405100 + G 100 -13.2 -5.00616 | overlap 2405077 CGTCCAATCGCGTTG CCGACCTCGCGCAC GTG GTGCGCGTGCTTGG TTTTTTCCAGAGCCA TERM 1858 2405077 - 2405093 + G 75 -13.7 -3.0166 | overlap 2405070 TCGCGTTGCCGACCT CGCGCAC GTG GTGCGCG TGCTTGGTTTTTTCC TERM 1859 2405588 - 2405537 - g 81 -11.7 -4.13945 | gap 3 AGCTGGAGGGTAAAA CGCCCG-CGTACCAGGAT-CGGG-GG CGG CCTCCCGGATCCTGGTACGCCCATCG CTGCCGACCTGGCAG XOO2276 2401778 - 2405743 + | hypothetical protein XOO2277 2405806 - 2406252 + | transposase TERM 1860 2407059 - 2407074 + F 100 -11.8 -4.67038 | AGCGCGTAGACCTGA CCGGCC CTTG GGCCGG TTTTGGTTTTCAGGG TERM 1861 2409105 - 2409060 - g 81 -11.1 -3.95324 | gap 1, opp_overlap 2409062 2409072 CATCGCCAACAATAA CGGCGGCAAGCAGGCGCTGGAG ACG CTGCAGCGGCTG-TTGCCGGTG CTGTGCCAGACCCAT TERM 1862 2410892 - 2410922 + G 95 -7.4 -5.00616 | overlap 2410887 2410899 2410902 CGTCCCATCGCGTTC CCGACCTCGCGCAC GTG GTTCGCGTGCTTGG TTTTTTCCAGAGCCA TERM 1863 2410902 - 2410918 + G 75 -10.1 -3.93166 | overlap 2410887 2410899 2410892 CGTTCCCGACCTCGC GCACGTG GTT CGCGTGC TTGGTTTTTTCCAGA TERM 1864 2411410 - 2411359 - g 81 -11.7 -4.13945 | gap 3 AGCTGGAGGGTAAAA CGCCCG-CGTACCAGGAT-CGGG-GG CGG CCTCCCGGATCCTGGTACGCCCATCG CTGCCGACCTGGCAG XOO2279 2407066 - 2411565 + | avirulence protein TERM 1865 2411847 - 2411821 - f 75 -14.4 -2.81173 | overlap 2411811 2411838 ACCAAGCCGAGCAGA GCGGCCAGCC GGGACAA GGCCGGCCGC TGACGCCCGAGCAGC XOO2280 2411957 - 2412628 + | transposase tra8 2412650 - 2412937 + | IS163, transposase XOO2282 2413019 - 2413243 + | transposase XOO2283 2414851 - 2413883 - | transposase TERM 1866 2413912 - 2413938 + g 71 -7.3 -4.18494 | gap 1, overlap 2413912 CAACGCTGTTGAGGA C-CTCCTCGGAG AAGA CTTCGAGGGGCG TTTTGAATCCAAGTA XOO2284 2416222 - 2415254 - | putative transposase TERM 1867 2415523 - 2415512 - G 76 -2.2 -4.8622 | overlap 2415513 GGCGGCAATGAAAAA TGCA GCCT CGCA GCTCTGCAACTCGTC TERM 1868 2416468 - 2416483 + G 74 -4.6 -4.55697 | GGCGTTGGAGATCTC GCGCTG GCCA CAGGGC TTTGTTTGTCCGCGT TERM 1869 2417201 - 2417217 + G 74 -10.1 -3.70902 | opp_overlap 2417196, overlap 2417202 CTGGCAGAGACGATG TGGCGGT TCA ACCGCCG TTTCGATCTGACCCG XOO2285 2416316 - 2417332 + | transposase XOO2286 2421419 - 2417310 - | RhsD protein TERM 1870 2421860 - 2421836 - H 76 -5.7 -4.59773 | opp_overlap 2421839 GCGCACGGCCAAAAA CAACGATTTGA GCG CCGAATCGTCG TTGGGGAAAATACGC TERM 1871 2422768 - 2422795 + H 70 -12 -3.12668 | gap 1 CGTTGCCGCCTGAGC GCCCATGCGGCGC ATG GC-CCACATGGGC TTGCATCTCCGCCTC TERM 1872 2423824 - 2423798 - H 72 -7.3 -4.18494 | gap 1, overlap 2423799 TACTTGGATTCAAAA CGCCCCTCGAAG TCTT CTCCGAGGAG-G TCCTCAACAGCGTTG TERM 1873 2424292 - 2424281 - H 74 -2.2 -4.8622 | overlap 2424282 GGCGGCAATGAAAAA TGCA GCCT CGCA GCTCTGCAACTCGTC XOO2290 2424994 - 2425686 + | hypothetical protein pgsA 2426793 - 2426161 - | CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase uvrC 2428649 - 2426793 - | excinuclease ABC subunit C XOO2293 2430064 - 2428646 - | hypothetical protein XOO2294 2430552 - 2430088 - | low molecular weight phosphotyrosine protein phosphatase kdsB 2431328 - 2430549 - | 3-deoxy-manno-octulosonate cytidylyltransferase lpxK 2432660 - 2431620 - | tetraacyldisaccharide 4'-kinase msbA 2434426 - 2432657 - | ABC transporter ATP-binding protein TERM 1874 2433795 - 2433819 + g 71 -9.2 -3.77464 | GACAAGGTCTGGTCT GCGGCCTGCA GCAAG TGCGCGCCGC TTTCCTGGATGCTGT TERM 1875 2433956 - 2433935 - G 73 -12.3 -3.33492 | opp_overlap 2433937 CCAGCTATGCCACAA CATCAGCGC CAGC GCGCCGATG ACTTGCAGCGATTGC TERM 1876 2434299 - 2434287 - G 73 -6.2 -4.43189 | opp_overlap 2434290 ATCAATGCCAGAAAA CCGG TGGTG CCGG CCGCTTCGATCAAGG exbD 2434887 - 2434423 - | biopolymer transport protein exbB 2435631 - 2434891 - | biopolymer transport protein comA 2438005 - 2435582 - | competence protein TERM 1877 2437444 - 2437388 - GH 87 -17.1 -2.88663 | overlap 2437436 AGGCACGCGTACATA GCCGGTTGCGGCGATGCGCTGCGCCAG CGC CTGACGCTCCGCATCGAAGCCACCGGG ATTGCGCAAACCGCG TERM 1878 2438345 - 2438360 + G 74 -4.6 -4.55697 | GGCGTTGGAGATCTC GCGCTG GCCA CAGGGC TTTGTTTGTCCGCGT TERM 1879 2439078 - 2439094 + G 74 -10.1 -3.70902 | opp_overlap 2439073, overlap 2439079 CTGGCAGAGACGATG TGGCGGT TCA ACCGCCG TTTCGATCTGACCCG XOO2301 2438193 - 2439209 + | transposase XOO2302 2439222 - 2439527 + | hypothetical protein XOO2303 2439630 - 2440430 + | hypothetical protein ycfV 2441337 - 2440603 - | ABC transporter ATP-binding protein lolC 2442580 - 2441330 - | lipoprotein releasing system transmembrane protein XOO2306 2443321 - 2442998 - | hypothetical protein TERM 1880 2443320 - 2443283 - G 93 -14.1 -4.07568 | gap 1, overlap 2443286 2443288 GTGGCGGGCCGAAAA CGACAGCGGCACCTGACC CAA GGGCCGGTGCCGCTG-CA AACCACATCCCGTCG TERM 1881 2443318 - 2443286 - G 93 -19.1 -3.08032 | overlap 2443283 2443288 GCGGGCCGAAAACGA CAGCGGCACCTGACC CAA GGGCCGGTGCCGCTG CAAACCACATCCCGT TERM 1882 2443316 - 2443288 - G 82 -15.9 -3.09823 | overlap 2443286 2443283 GGGCCGAAAACGACA GCGGCACCTGACC CAA GGGCCGGTGCCGC TGCAAACCACATCCC sdhB 2444139 - 2443357 - | succinate dehydrogenase iron-sulfur subunit TERM 1883 2443927 - 2443939 + g 76 -2.6 -4.89233 | opp_overlap 2443918 ACGGAACGCCAACGT CGGG TCGAT CTCG TTTTTGATCTTGATC XOO4821 2444293 - 2444156 - | hypothetical protein sdhA 2446159 - 2444369 - | succinate dehydrogenase flavoprotein subunit TERM 1884 2445152 - 2445173 + g 74 -5.1 -4.45945 | gap 1 GGCAAAGATGTGCGC GCT-TTCGGC AAT GCCGGGCAGC TTTTCGTTGATGACT sdhD 2446580 - 2446194 - | succinate dehydrogenase membrane anchor subunit TERM 1885 2446518 - 2446551 + g 71 -3.7 -4.57073 | gap 1, overlap 2446519 CATCACGAAATGTTC GGTAC-CGGTCTTGGC GGC GCCCAGGCCGCGCACG TTTTTCAACGGGGTA sdhC 2446972 - 2446577 - | succinate dehydrogenase membrane anchor subunit TERM 1886 2447308 - 2447346 + r 70 -10.3 -3.57462 | gap 1, opp_overlap 2447301 ATCCAATACGTCCGA TTGGTCG-GCGCGGATGC AGTG GCGTTCGCGCATGCCCAA TTTGCCAATGACGTA TERM 1887 2447489 - 2447516 + r 79 -11.2 -3.92324 | TGCCGGACGGCAACG CGGCCGAGATCG CCGC CCAACTCGGCCG TTTCGTCTTCCGCCG ugpC 2449340 - 2448243 - | sugar ABC transporter ATP-binding protein zwf 2449630 - 2451204 + | glucose-6-phosphate 1-dehydrogenase glk 2451201 - 2452208 + | glucokinase pgl 2452205 - 2452924 + | 6-phosphogluconolactonase TERM 1888 2452978 - 2452959 - f 81 -13.6 -3.61517 | AGTCCCTCGCAACAA CCCGCACA TCCA TGTGCGGG GAATTAAAAGAGCTT edd 2453027 - 2454943 + | phosphogluconate dehydratase TERM 1889 2455417 - 2455429 + F 70 -10.5 -3.56092 | AGCTGTTCCCAGCCA CCGCC GTG GGCGG TTTGCAGACTGCTCA eda 2455462 - 2455659 + | KDPG and KHG aldolase TERM 1890 2455826 - 2455838 + F 71 -4.8 -4.42238 | TGCGGTTTTGGCGTG CTGG AACTG CCAG TTTTCGTTACGCTAG XOO2320 2455880 - 2457256 + | IS1478 transposase XOO2321 2457926 - 2457480 - | hypothetical protein TERM 1891 2457853 - 2457818 - G 84 -14.6 -3.38768 | opp_overlap 2457833 2457851 TGATACTACCCACAA TCGCAGTGCCGGACCC GTAG AGGCCCGGCGCGGCGA GGCCTAGGGCCTCCA TERM 1892 2457833 - 2457870 + g 74 -5.4 -4.51174 | opp_overlap 2457818, overlap 2457851 TCGCAGTGCCGGACC CGTAGAGGCCCGGCGC GGCGAG GCCTAGGGCCTCCATG TTTTCCTTGTAGTAG TERM 1893 2458250 - 2458225 - H 80 -5.3 -4.86133 | overlap 2458216 GATAGACAGCAAAAA GCCCCACCAGA TTTC TCCAGAAGGGC TCTACGCTGGTGCTG XOO2322 2458499 - 2458879 + | two-component system regulatory protein TERM 1894 2460692 - 2460706 + G 82 -7 -4.63486 | CGCATCGCCGCACTT CGCCAG CGA CGGGCG TTTTCTTGGACACAT XOO2323 2459037 - 2462489 + | two-component system sensor protein XOO2324 2463720 - 2463163 - | putative transposase XOO2325 2464195 - 2463686 - | putative transposase XOO2326 2464253 - 2464699 + | transposase TERM 1895 2465079 - 2465064 - f 70 -7.5 -3.98282 | opp_overlap 2465073 CCTAGACGAACGAAA CGCCG CGCTGC CGGCG CCCTACTGGTGGGCG XOO2330 2465858 - 2466751 + | sensor histidine kinase XOO4822 2467181 - 2466948 - | hypothetical protein XOO2331 2467348 - 2468322 + | hypothetical protein XOO4823 2468597 - 2468917 + | hypothetical protein TERM 1896 2469097 - 2469111 + T 73 -11.4 -3.66784 | ACTCTCAATTCCCAT GGCGGT CCA ACCGCC TTCTCTTACGCATGG XOO4824 2470120 - 2469086 - | hypothetical protein XOO2333 2471345 - 2470617 - | ISRSO5-transposase protein XOO2334 2471584 - 2472801 + | phospholipase TERM 1897 2472848 - 2472817 - T 100 -11.4 -4.69053 | GAGCAGCTAACAAAA CGACTGCGCTCACC GCCA GGCGGGCGCGGCCG GTGCTCGGAATCGGC TERM 1898 2473061 - 2473082 + T 100 -15.9 -5.0925 | opp_overlap 2473061 TTAATCCTATAAAAA GCCGGCATG TACG CATGCCGGC TTTTTGATTTTACAA TERM 1899 2473082 - 2473061 - T 100 -15.9 -4.87786 | opp_overlap 2473061 TTAATCCTATAAAAA GCCGGCATG TACG CATGCCGGC TTTTTGATTTTACAA gst 2473814 - 2473230 - | glutathione S-transferase fumB 2475518 - 2474001 - | fumarate hydratase TERM 1900 2475534 - 2475554 + H 73 -8.2 -4.07885 | opp_overlap 2475547 2475548 GGCTGGCTCTGCGGC TGGCGGGG GGAAA CCCGGCCA TTTTAGGGCAAAGTG TERM 1901 2475597 - 2475567 - H 73 -11.1 -3.60627 | gap 1, opp_overlap 2475591 2475592, overlap 2475548 2475547 2475571 CCATTTTAGGGCAAA GTGACCGGCGCGCC CGCT GTCACGCCGG-CAC CCGCTGTTCCGTCCT TERM 1902 2477018 - 2477053 + G 77 -12 -3.6715 | gap 1, opp_overlap 2477003 CGTCGGCTTCCGTTA TCCGGATGCCG-ACC AGTGGAC GGTGCGGCATCTGGA TTTCGAGTTGCGTGC msbA 2475852 - 2477732 + | ABC transporter ATP-binding protein fpr 2477888 - 2478700 + | ferredoxin-NADP reductase gpo 2479336 - 2478851 - | glutathione peroxidase-like protein TERM 1903 2480669 - 2480651 - H 77 -4.5 -4.81852 | gap 1 CGACAAGGAACAAAA GGCCGCGC GCAA GC-CGACC TTCAAGCTGGAAGCC dcp 2480880 - 2481752 + | peptidyl-dipeptidase TERM 1904 2482230 - 2482201 - T 100 -25.1 -3.64198 | overlap 2482204 GCTCTATACAGACAA CAACGGCGCCCGG TGAT CCGGGCGCCGTTG AGCTGCCTCTGCACT TERM 1905 2482227 - 2482204 - T 100 -21 -3.95183 | overlap 2482201 CTATACAGACAACAA CGGCGCCCGG TGAT CCGGGCGCCG TTGAGCTGCCTCTGC XOO4825 2482997 - 2482284 - | hypothetical protein TERM 1906 2483111 - 2483130 + r 78 -15 -3.01712 | GCATTCACCGCCCCG GCTCCCGC TGCA GCGGGAGC TCTTCGCCCAACACG aprE 2484200 - 2483100 - | extracellular protease XOO2343 2484523 - 2485023 + | DNA-directed RNA polymerase specialized sigma subunit, sigma24-like protein XOO2344 2485020 - 2485763 + | hypothetical protein XOO2345 2486355 - 2485855 - | MarR family transcriptional regulator XOO2346 2487255 - 2486422 - | hypothetical protein XOO2347 2487593 - 2487306 - | hypothetical protein XOO2348 2487804 - 2487992 + | hypothetical protein XOO2349 2488972 - 2488409 - | hypothetical protein ygdR 2489868 - 2489014 - | oligopeptide transporter TERM 1907 2489407 - 2489395 - G 79 -5.5 -4.69053 | overlap 2489406 GATGATCCAATAAAA GGCGT CGA ACACC AGCTTGGCCAGATGT TERM 1908 2489630 - 2489611 - G 79 -7 -4.57569 | overlap 2489612 GTAGTTGCCCAAAAA GCGGTCGG CCAG CCAGCCGC CCGGCAGCGGGAAGA TERM 1909 2489997 - 2490045 + H 70 -7.5 -4.00042 | gap 3, overlap 2489991 2489996 2490028 CGTTATTCCCAAGGG CGACG-AGGTCGCGCAG-GTTGGC TGGG GCCGACGTTGCGCGGGCTGCG-CG TTGTTTGCTCCCGCC TERM 1910 2490980 - 2490963 - g 81 -3.4 -5.0538 | gap 1 GCCGATCTGAAAAAA CAG-GGC TCGCT GCCGCTG CCGTATGACCCGTCG XOO2351 2490219 - 2491997 + | hypothetical protein TERM 1911 2492206 - 2492173 - g 71 -7.3 -4.08767 | opp_overlap 2492173, overlap 2492174 GGCAGCCGCGCAAAA CGCGCCGTCCTCCCA GCCG TGGAGGGACACCGCA TTGACTGCGGACCAG bglS 2492069 - 2494315 + | beta-glucosidase TERM 1912 2494558 - 2494592 + F 73 -10.9 -3.54543 | gap 1, opp_overlap 2494567, overlap 2494567 CGACTCACGGTAGAT CGTAAAAAA-CCTCGC TTCG GCGGGGTTTTTTTGCG TTTGGGCGGGTGCCT TERM 1913 2494567 - 2494582 + F 100 -8.2 -5.58209 | opp_overlap 2494567, overlap 2494558 GTAGATCGTAAAAAA CCTCGC TTCG GCGGGG TTTTTTTGCGTTTGG TERM 1914 2494582 - 2494567 - f 85 -6 -5.07567 | opp_overlap 2494558 2494567 GTAGATCGTAAAAAA CCTCGC TTCG GCGGGG TTTTTTTGCGTTTGG XOO4827 2495152 - 2495289 + | hypothetical protein XOO2354 2495642 - 2497498 + | hypothetical protein TERM 1915 2497678 - 2497707 + T 70 -12.1 -3.12351 | opp_overlap 2497655 2497673, overlap 2497680 CCAGACGCAACGCGG AGCTGCGCGGCAC CCAA GTGTCGCGCAGTG TTGCGTCTGAAGACA TERM 1916 2497680 - 2497705 + T 89 -16.9 -3.12327 | opp_overlap 2497655 2497673, overlap 2497678 AGACGCAACGCGGAG CTGCGCGGCAC CCAA GTGTCGCGCAG TGTTGCGTCTGAAGA sglT 2499521 - 2497743 - | sodium/glucose cotransport protein TERM 1917 2499397 - 2499363 - G 73 -12.1 -3.33737 | overlap 2499364 2499378 GACGAACCTGCAGAA TGCTGCCGCAACGCA TCGCG TGCGCCACGGCAGCG CGGCGAACCGCAGCT TERM 1918 2499396 - 2499364 - G 77 -15.6 -2.59921 | overlap 2499363 2499378 ACGAACCTGCAGAAT GCTGCCGCAACGCA TCGCG TGCGCCACGGCAGC GCGGCGAACCGCAGC celD 2502177 - 2499565 - | glucan 1,4-beta-glucosidase phoX 2502437 - 2504566 + | alkaline phosphatase XOO2358 2505229 - 2504801 - | hypothetical protein XOO2359 2505772 - 2505428 - | hypothetical protein TERM 1919 2505909 - 2505878 - R 100 -17.4 -4.08216 | opp_overlap 2505885, overlap 2505885 TCATGTCGTCCAAAA CAAAAAACGGGGCC CGCA GGCCCCGTTCTCTG TCTGCGCGATGCGCA TERM 1920 2505885 - 2505902 + r 81 -14.1 -3.64198 | opp_overlap 2505885 2505878 GTCCAAAACAAAAAA CGGGGCC CGCA GGCCCCG TTCTCTGTCTGCGCG TERM 1921 2505902 - 2505885 - R 100 -14.1 -5.79595 | opp_overlap 2505885, overlap 2505878 GTCCAAAACAAAAAA CGGGGCC CGCA GGCCCCG TTCTCTGTCTGCGCG pgi 2507445 - 2505931 - | glucose-6-phosphate isomerase TERM 1922 2506972 - 2506955 - G 79 -6.9 -4.54449 | ACATTGGAGACAAAA TGCACGC GCAA GCGGGCA CCGGACACCGGACGC panD 2507822 - 2507442 - | aspartate alpha-decarboxylase panC 2508843 - 2508001 - | pantoate--beta-alanine ligase panB 2509655 - 2508840 - | 3-methyl-2-oxobutanoate hydroxymethyltransferase folK 2510176 - 2509691 - | 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pcnB 2511547 - 2510180 - | polynucleotide adenyltransferase TERM 1923 2511691 - 2511721 + r 93 -19 -3.28712 | opp_overlap 2511691, overlap 2511698 GTCTCGCTGCAGAAA CGCCAGAGCCCCGC ATC GCGGGGCTTTTGCG TTGTAGCGCGGGCAC TERM 1924 2511721 - 2511691 - R 95 -16.8 -3.85698 | opp_overlap 2511691 2511698 GTCTCGCTGCAGAAA CGCCAGAGCCCCGC ATC GCGGGGCTTTTGCG TTGTAGCGCGGGCAC TERM 1925 2511698 - 2511714 + r 100 -15.1 -4.3208 | opp_overlap 2511691, overlap 2511691 TGCAGAAACGCCAGA GCCCCGC ATC GCGGGGC TTTTGCGTTGTAGCG XOO2367 2513206 - 2512163 - | putative GTP cyclohydrolase amiC 2514317 - 2513121 - | N-acetylmuramoyl-L-alanine amidase TERM 1926 2513552 - 2513566 + gH 73 -12.8 -3.14931 | opp_overlap 2513544 2513541 CAAACACCGAGGCGC CGCGCG CTT CGCGCG TTGGTGCGGCATCGG TERM 1927 2513730 - 2513741 + gH 78 -4.4 -4.72272 | CCGCCCGGCCACCGC CATG ACCA CATG TTTTTCGTAACGCGC TERM 1928 2515733 - 2515702 - H 95 -15.1 -4.07687 | ATGGCCGCGCGAAAA CGCCCGACCTGCG TGGCAT CGCAGGGCAGGCG CGGCTCATAGAACGC nagN 2516276 - 2516422 + | IS1404 transposase XOO2374 2518234 - 2516858 - | IS1478 transposase XOO2375 2519066 - 2521801 + | serine protease TERM 1929 2521899 - 2521879 - f 76 -6 -4.55209 | opp_overlap 2521879 GACAGATGAAAGAAA GGCCCAGG CATGT CCGAGGCC TTTTCGTTGACGGCA czcB 2522144 - 2523406 + | cation efflux system protein TERM 1930 2523849 - 2523835 - g 75 -7.8 -4.27316 | CGCTGGAATCGAAAA CACGCA GCC TGCGCG AGCTGTCCGACCTGC TERM 1931 2524041 - 2524028 - g 71 -9.5 -3.75738 | CATCACCAGCAATAA CGCCG ATGG CGGCG GTAGCGTGATGGATC TERM 1932 2525138 - 2525105 - g 73 -12.3 -3.30441 | CATCACCCTGGACAA GGCAGCACGCATGGC CAAC GCCTTGCGCACGGCC ACGCTGGAATTTCCC czcA 2523399 - 2527973 + | cation efflux system protein TERM 1933 2529038 - 2529087 + G 72 -12.7 -3.14132 | gap 1, overlap 2529044 2529045 ACGGCGGGCAGATCT GGGCCGA-GCCGGCCAACGTGCGC GGT GCGCGCTTCGGCCTGCGTTTGCCC TTGGTCGCGGCGGAG nodV 2528038 - 2529114 + | nodulation protein nodW 2529111 - 2529722 + | nodulation protein TERM 1934 2529965 - 2529946 - T 100 -10.6 -5.06103 | opp_overlap 2529946 AGAACGCGCAAAAAA CGCCCAGG CATG CCGGGGCG TTTCTCAGTTTCAAG TERM 1935 2529946 - 2529965 + T 78 -10.6 -4.02132 | opp_overlap 2529946 AGAACGCGCAAAAAA CGCCCAGG CATG CCGGGGCG TTTCTCAGTTTCAAG yapH 2538197 - 2529999 - | YapH protein TERM 1936 2536834 - 2536867 + g 95 -12.4 -4.25104 | opp_overlap 2536813 2536817 2536858, overlap 2536858 CCACCGGTGAACGTG CCGGCACCATTGAG CGTCAA CTCACCGGTGCCGG TTTTGGTCAGCGCAC TERM 1937 2538194 - 2538170 - G 70 -7.7 -3.96327 | overlap 2538172 ATTGCTGAGCAGAAA CAGACGCGCCC CAT GCGCGCGCCTC CAAAGACGGTATTGG TERM 1938 2538192 - 2538172 - G 71 -10.3 -3.57406 | overlap 2538170 TGCTGAGCAGAAACA GACGCGCCC CAT GCGCGCGCC TCCAAAGACGGTATT XOO2381 2538239 - 2539639 + | putative ISXo8 transposase XOO2382 2540820 - 2539852 - | putative transposase TERM 1939 2540121 - 2540110 - G 76 -2.2 -4.8622 | overlap 2540111 GGCGGCAATGAAAAA TGCA GCCT CGCA GCTCTGCAACTCGTC XOO2383 2541397 - 2542410 + | hypothetical protein XOO2384 2542522 - 2542650 + | IS1595 transposase XOO4828 2542699 - 2542962 + | IS1404 transposase TERM 1940 2542973 - 2542954 - gT 72 -4.2 -4.57073 | overlap 2542957 2542958 2542959 GATGCGCTGCAAAAA CAATGGTG AGCG CACCAGCG CGTCGTGCGCTGGTG TERM 1941 2542970 - 2542957 - gT 76 -6.7 -4.40561 | overlap 2542954 2542958 2542959 GCGCTGCAAAAACAA TGGTG AGCG CACCA GCGCGTCGTGCGCTG XOO2385 2542815 - 2543651 + | IS1478 transposase aroA 2544997 - 2543675 - | 3-phosphoshikimate 1-carboxyvinyltransferase TERM 1942 2543765 - 2543741 - G 71 -10.7 -3.57561 | opp_overlap 2543744 GTCGAAGCCCGGAAA CGACGTCGCCA CGT TGGCCACATCG TTGACCCGCACGCTG TERM 1943 2543854 - 2543892 + g 74 -10.3 -3.73775 | gap 1, overlap 2543855 TTTCGATCACGCCGC TGCC-GATGCTGCCGCCG TGGA TGGTGGCACCATCCGGCG TTTCGTCGACCTGCA TERM 1944 2544317 - 2544285 - G 78 -4.1 -4.72272 | gap 1, overlap 2544286 2544287 GCTGCCGACGAAAAA TCCGCA-GGGACCG CGATAT CGGTCGCGCGCAGA CGCTGCCCGCCGCGC TERM 1945 2545016 - 2545042 + r 77 -13.1 -3.54459 | gap 1 TGTGATCCGATGGCG GCGACATCGCCA ACGC TGGCGATG-CGC TTTGAAGAAGGTTGC pheA 2546327 - 2545119 - | P-protein serC 2547461 - 2546376 - | phosphoserine aminotransferase TERM 1946 2548399 - 2548381 - g 79 -2.3 -5.00616 | GCTTCGTCGAAAAAA TGCCCGA AACCG CCTGGCA CGATCTGCAACCGTC XOO2389 2547612 - 2548604 + | putative sulfite oxidase subunit YedY TERM 1947 2548699 - 2548644 - T 100 -22.5 -3.07043 | opp_overlap 2548652 2548653 TGCATCACTGCAAGA GCGCGCTGGCGCGCGACCGGGCGTT CTACGT AGCGCCTCATCGCGCGCCAGCGGGC TCCTACCAAGCATGA TERM 1948 2549516 - 2549501 - T 78 -3.2 -5.00616 | overlap 2549502 CGCGCCTGGAAAAAA CTCAGC GCGC GCCGAA CCAAAGCAAGGCGCT TERM 1949 2549538 - 2549526 - T 70 -10.5 -3.61468 | overlap 2549522 GCCGAACCAAAGCAA GGCGC TCA GCGCC GCCGCAAGCAACACC XOO2391 2550311 - 2549502 - | hypothetical protein XOO2392 2550552 - 2550827 + | hypothetical protein TERM 1950 2550860 - 2550819 - f 74 -4.6 -4.56597 | gap 2, overlap 2550832 TTGCTGGCCGAAAAA TTGGC-CTGAACCA-CGC TTGGCGCT GCGCTGCTTCAGCGCCAA GTCACCTGCCCTGGC phaF 2550989 - 2551552 + | poly(hydroxyalcanoate) granule associated protein TERM 1951 2551595 - 2551565 - f 76 -8.3 -4.15453 | gap 1, opp_overlap 2551569, overlap 2551553 2551569 TAAGCGACGGTAAAA GCAACCGCGCCACC GTCT AGTGGGGCGGTT-C TACCGAGCAGGTGAA TERM 1952 2551592 - 2551569 - f 74 -10.2 -3.68366 | opp_overlap 2551569, overlap 2551553 2551565 CGACGGTAAAAGCAA CCGCGCCACC GTCT AGTGGGGCGG TTCTACCGAGCAGGT XOO2394 2552194 - 2553120 + | hypothetical protein hutC 2553981 - 2553277 - | histidine utilization repressor TERM 1953 2554072 - 2554114 + r 76 -13.4 -3.14344 | GCATCGTCGGGCGGG TGCGCGGTGTGCACGTTGCG GCA TGCACCATGCACACCCTGCA TTGATGAGGGCACTG sdeB 2555694 - 2554339 - | N-formimino-L-glutamate deiminase TERM 1954 2556584 - 2556627 + GH 83 -5.8 -4.90778 | gap 1, overlap 2556590 2556593 AGGCCGGCATCGCAG CGATGGCTGGCGCCGGCACGG TGG CAGTGCTGTTGCCGGGCG-CG TTTTATTTCACTCGC TERM 1955 2556943 - 2556967 + G 80 -12.1 -3.76224 | overlap 2556945 GGCTTCAACCCTCTT CATGCCCGCGT GTT GCGCGGGCATC TTTGCTGAATCCGGA TERM 1956 2556945 - 2556965 + G 86 -14.7 -3.46647 | overlap 2556943 CTTCAACCCTCTTCA TGCCCGCGT GTT GCGCGGGCA TCTTTGCTGAATCCG hutI 2555770 - 2556975 + | imidazolonepropionase TERM 1957 2557642 - 2557660 + GF 80 -13.8 -3.35679 | AACCGTGTTGCAGGC CGCGCTGG TCG CCGGCGCG TTGTCGGTAGAAGCG TERM 1958 2558384 - 2558334 - gf 71 -13.4 -2.57132 | opp_overlap 2558323, overlap 2558333 TGGCCGCCGCACAAG GCTGCGATTTCCA-TGCGCCGCTG CGCTC CAGCGCCGCACTGGAAGCCGC-GC GTGCCCTGTTGCGCG hutH 2556899 - 2558530 + | histidine ammonia-lyase hutG 2558709 - 2559566 + | formylglutamate amidohydrolase TERM 1959 2560320 - 2560279 - g 81 -3 -5.03314 | gap 3, overlap 2560281 TGCACCGCGAAAAAA CCGC-TGTCGGTCGGC-CTGC TCG GCAATGTCG-CCGACATGCTG GACGAACTGCTGCTG TERM 1960 2560573 - 2560554 - g 71 -10.6 -3.66018 | GGACTACGGCAACAA CCTGCGCC AGAT GGCGCTGG AAGCCGGCATCGATA hutU 2559583 - 2561250 + | urocanate hydratase TERM 1961 2561554 - 2561576 + F 76 -6.9 -4.41353 | opp_overlap 2561553, overlap 2561555 2561556 GCGCACGCAAGCGAC ATCGCGCCT CCGGC AGGCGCGGG TTTTCGTATGTCTCC XOO2401 2561610 - 2562704 + | acyltransferase, putative XOO2402 2563152 - 2563586 + | hypothetical protein XOO2403 2564232 - 2563708 - | IS1404 transposase TERM 1962 2563882 - 2563929 + g 78 -15.4 -2.66373 | opp_overlap 2563881, overlap 2563878 2563877 GTCCATCGACCACAC CGGGTTGGCCTGCGCTGGCCGC AGCA GCGGCTGACGCTCGCCAACCGG TACCTTCTTGCGCTT XOO2404 2564495 - 2564226 - | IS1404 transposase TERM 1963 2564569 - 2564587 + r 79 -9.5 -4.13341 | opp_overlap 2564569 GTCGCCCATAAACAA CGCCGGT AGTAC GCCGGCG TTTGCTTTGATCTCT TERM 1964 2564587 - 2564569 - R 73 -8.8 -4.06419 | opp_overlap 2564569 GTCGCCCATAAACAA CGCCGG TAGTACG CCGGCG TTTGCTTTGATCTCT gyrA 2567318 - 2564622 - | DNA gyrase subunit A TERM 1965 2566823 - 2566863 + g 70 -5.4 -4.33105 | gap 2, overlap 2566810 2566807 2566827 AGCCGTTGACCAGCA GGCTCGGGAACCG--GGTCG GCA TGACCGTCGGTTCCTGTTCC TTTTCGTCGTAATTA TERM 1966 2567054 - 2567034 - G 72 -6.7 -4.21275 | opp_overlap 2567043, overlap 2567023 2567035 GTAACGCAGCGAAAA CGGCTGCGC CAT GCGCACCAG CGTGTCGTATACCGA TERM 1967 2567489 - 2567528 + r 71 -13.6 -2.52464 | gap 1 AAGCACTTGCGCGGA GTTTGA-GCGGCGCTGGCA GCC TGTCGGCGCCGCGTCGGGC TCAGTTGCCGAAGGC mtnA 2568593 - 2567529 - | methylthioribose-1-phosphate isomerase TERM 1968 2568763 - 2568776 + r 100 -4.5 -5.4833 | overlap 2568761 GCCGCGCTCTCCTGG CGGCT GCGC AGTCG TTTTTTGTTCGCTGC XOO2408 2569627 - 2568794 - | hypothetical protein TERM 1969 2568936 - 2568948 + gr 82 -6.9 -4.65916 | opp_overlap 2568930, overlap 2568911 ACCGACACACCGCAG GTGCG GCG CGCGC TTTTCTTCGACTCGC lysS 2570552 - 2569590 - | lysyl-tRNA synthetase ligA 2573074 - 2570549 - | NAD-dependent DNA ligase LigA TERM 1970 2572792 - 2572780 - G 75 -3.4 -4.7373 | opp_overlap 2572780, overlap 2572790 CCATTCGACGAAAAA TTCG ATCAA CGAA GTTTTTGACCTCAAC hisC 2573231 - 2573371 + | aminotransferase zipA 2574661 - 2573930 - | cell division protein ZipA TERM 1971 2574075 - 2574093 + g 82 -4.4 -5.00884 | overlap 2574076 AGCAATTCGGCCATG CGCTGCAC GGT GGGCAGCA TTTTTTCCCAGGCAT smc 2578374 - 2574718 - | chromosome segregation protein TERM 1972 2575954 - 2575972 + g 75 -13.8 -3.03441 | overlap 2575971 CGCATCTTCGAGCTT GGCGCGCG CCT CGCGTGCC TGTTCGCGGCTGGTG TERM 1973 2578410 - 2578383 - R 100 -21.4 -4.62069 | GCGGCACCCCAAAAA CGAAGGGCGCCT AACA AGGCGCCCTTCG GATGACACAGACGGC rplI 2578880 - 2578431 - | 50S ribosomal protein L9 TERM 1974 2579044 - 2579063 + r 91 -9.2 -4.47551 | CTATCAATTTGATGA CCCGCACA CGCA TGCGCGGG TTTTATCAGTTGCCT rpsR 2579377 - 2579147 - | 30S ribosomal protein S18 rpsF 2579820 - 2579389 - | 30S ribosomal protein S6 XOO2417 2580621 - 2580175 - | hypothetical protein asnC 2580720 - 2582114 + | asparaginyl-tRNA synthetase XOO2419 2582116 - 2582373 + | hypothetical protein XOO2420 2582672 - 2582998 + | hypothetical protein paiB 2583336 - 2583638 + | transcriptional regulator protein Pai2 yadF 2583625 - 2584386 + | carbonic anhydrase TERM 1975 2584447 - 2584398 - f 88 -17.2 -3.06183 | gap 1, opp_overlap 2584405 2584410 CTGAGCCGCACGCAA CTGCATGGCCAACCGC-CGCATC CATGT GAGGCGAGCGGTTGGCTATGCTG GACACCTTCTCCGCC TERM 1976 2584405 - 2584440 + F 78 -15.5 -2.78715 | gap 1, opp_overlap 2584398, overlap 2584410 GCACGCAACTGCATG GCCAACCGC-CGCATC CATGT GAGGCGAGCGGTTGGC TATGCTGGACACCTT haaO 2584442 - 2585005 + | 3-hydroxyanthranilate 3,4-dioxygenase TERM 1977 2585317 - 2585354 + G 80 -15 -3.14051 | opp_overlap 2585331, overlap 2585315 2585352 ATTGCTCGGCATCTG GGTCGGCCA-CACCACGC CAGC GC-TGGTGCTGGCCGGCC TGTTGCTCGGCCTGG XOO2425 2585018 - 2585665 + | hypothetical protein TERM 1978 2586126 - 2586068 - g 75 -12.4 -3.53444 | gap 3, overlap 2586069 GCAGCCGTGGCGAAA TCCAGG-CGCAACTGGCCGAAGCGC-GCC TGCC GGCAGCGCTACGCCCGGCCGCGACCTGG- GCCACCTTGCGGGCG TERM 1979 2586126 - 2586069 - g 87 -18.4 -2.71924 | gap 2, overlap 2586068 CAGCCGTGGCGAAAT CCAGG-CGCAACTGGCCGAAGCGC-GCC TGCC GGCAGCGCTACGCCCGGCCGCGACCTGG GCCACCTTGCGGGCG TERM 1980 2586575 - 2586525 - g 73 -14.5 -2.52464 | CGCGGTTGCAAGCCA CCGTGGCCGGCAGCGCGCTGGCG CTGAT CGCCTACGCGCTGTGGCCCACGC GCGAACGTCGGCAGA XOO2427 2585915 - 2587147 + | hypothetical protein XOO2428 2587206 - 2588477 + | kynureninase XOO2429 2588649 - 2590016 + | kynurenine 3-monooxygenase sbcB 2590320 - 2591765 + | exonuclease I XOO2431 2591762 - 2592448 + | hypothetical protein TERM 1981 2592486 - 2592537 + GF 71 -8 -4.07568 | gap 1 CCAGCAGCGACGGAC GCTGGGCCGCACCAAGCT-ATTGGT CTC ACCGATCGGTTTGGGGTGTTCCGGC TTTTGGGGCCACCGC XOO2432 2592421 - 2593440 + | putative oxidoreductase XOO2433 2593482 - 2594042 + | hypothetical protein XOO2434 2595019 - 2594063 - | 5'-nucleotidase XOO2436 2596193 - 2596564 + | putative transposase XOO2437 2596530 - 2597006 + | putative transposase TERM 1982 2597104 - 2597135 + T 73 -11.4 -3.66288 | opp_overlap 2597068 GAGTATTCCGAGCAC CGGCCGCGCCCGCC TGGC GGTGAGCGCAGTCG TTCTGTTAGCCGCTC XOO2438 2599433 - 2597298 - | 23S rRNA m(2)G2445 methyltransferase TERM 1983 2599477 - 2599453 - R 76 -9.9 -3.92869 | overlap 2599455 GCAGGTATCGATAAA GACGCTGGCCG CGG CGGCGAGCGTG GGAGCAGGACAGCGG TERM 1984 2599475 - 2599455 - R 77 -12.5 -3.55378 | overlap 2599453 AGGTATCGATAAAGA CGCTGGCCG CGG CGGCGAGCG TGGGAGCAGGACAGC XOO2440 2600281 - 2600003 - | ABC transporter ATP-binding protein XOO2441 2601237 - 2600287 - | ABC transporter ATP-binding protein TERM 1985 2600928 - 2600888 - G 71 -7.4 -4.08767 | gap 1, overlap 2600889 2600903 CCGACGCGTTCAAAA TCGGCGG-GCGCAACACCG CCAG CGGCGATGCGCTCCAGCGC ATCCAGCAGCGGCGC TERM 1986 2601172 - 2601151 - G 75 -7.9 -4.20817 | overlap 2601152 CAGATCGGAAAATAA CGGGCTGCC ATCG GGCAGCACA TACGCAACGCTTTCC XOO2442 2601902 - 2601396 - | acetyltransferase XOO2443 2602470 - 2601943 - | hypothetical protein XOO2445 2602983 - 2603558 + | hypothetical protein XOO2446 2604588 - 2603635 - | hypothetical protein TERM 1987 2604626 - 2604612 - R 84 -11.4 -4.18934 | CAGCACTGCAAGAAA CTGCGC TCC GCGCAG CGAACCTGCGTCACC sseA 2605549 - 2604677 - | thiosulfate sulfurtransferase TERM 1988 2605001 - 2604984 - G 77 -8.3 -4.25283 | ACGTCGCCACGAAAA CGCTCGC CTGC GCGCGCG TCCAGCAACCAGCCC XOO2448 2606253 - 2605546 - | MutT/nudix family protein TERM 1989 2606473 - 2606442 - R 100 -22.4 -4.25283 | opp_overlap 2606448, overlap 2606443 ATCGGTCGACCAAAA CGACAACGCCGGCC TGGT GGCCGGCGTTGTCA TCACAACATCGAATC TERM 1990 2606472 - 2606443 - R 100 -23.7 -3.14848 | opp_overlap 2606448, overlap 2606442 TCGGTCGACCAAAAC GACAACGCCGGCC TGGT GGCCGGCGTTGTC ATCACAACATCGAAT TERM 1991 2606448 - 2606467 + r 89 -16.4 -3.40522 | opp_overlap 2606443 2606442 CGACCAAAACGACAA CGCCGGCC TGGT GGCCGGCG TTGTCATCACAACAT XOO2451 2607193 - 2606786 - | peptidyl-prolyl cis-trans isomerase crt 2607354 - 2608136 + | 3-hydroxybutyryl-CoA dehydratase XOO2453 2608145 - 2608516 + | hypothetical protein nth 2608513 - 2609223 + | endonuclease III TERM 1992 2609385 - 2609337 - T 100 -13.3 -5.40072 | opp_overlap 2609346 CCGGCCGCAAAAAAA TCGCGACTGGATGATGCGT CTTTGGGCGCC ATGCATCATCCGGTCGCGA CGGGGGTCACTCGGC cynT 2611081 - 2610533 - | carbonic anhydrase TERM 1993 2610587 - 2610623 + g 73 -12.3 -3.31144 | gap 1 GCGCGGAGTGGCCTC GGGAGTGCTTTCGGCC AGGAGC GGCCGGAAGC-CACCC TTCTCGGCATCGAAG TERM 1994 2611164 - 2611149 - R 70 -7.5 -4.08767 | GCCAGTTCCTGAAAA CGCGC ACTCTG GCGCG GATAGACTTCCTTAC XOO2459 2611998 - 2611552 - | transposase TERM 1995 2613666 - 2613650 - g 77 -8.7 -4.26076 | GTATTTCCAGGAAAA CGCCAAT CGC ATCGGCG CCAACGCACACGACT oprO 2612805 - 2614055 + | polyphosphate-selective porin O TERM 1996 2614103 - 2614057 - f 100 -17.3 -3.57263 | gap 1, opp_overlap 2614056 2614052, overlap 2614058 2614061 AGTTCTACTGGTAAA CGCATTGCCACCGCGTGCGCTC GGTC GAGCGCACGCGGTGACGGC-CG CCACTTCCTTCCGGC TERM 1997 2614104 - 2614058 - f 84 -17.3 -2.74144 | gap 1, opp_overlap 2614056 2614052, overlap 2614057 2614061 GTTCTACTGGTAAAC GC-ATTGCCACCGCGTGCGCTC GGTC GAGCGCACGCGGTGACGGCCGC CACTTCCTTCCGGCC TERM 1998 2614100 - 2614061 - f 90 -20 -2.64803 | opp_overlap 2614056 2614052, overlap 2614057 2614058 CTACTGGTAAACGCA TTGCCACCGCGTGCGCTC GGTC GAGCGCACGCGGTGACGG CCGCCACTTCCTTCC TERM 1999 2614328 - 2614343 + G 80 -8.2 -4.42062 | overlap 2614306 2614307 GGCTGCCGATGTCAC CGGCGC TGGC GCGTCG TTTATTTACCCGGTG phoX 2614146 - 2615264 + | phosphate binding protein TERM 2000 2615312 - 2615287 - f 72 -11.8 -3.37245 | CCATCGCAACAGGAA CGACGCCGTG TCTCTC CCCGGCGTCG GCACAGGGACGCGGC TERM 2001 2615322 - 2615341 + F 100 -12.8 -5.31877 | GCGTCGGCACAGGGA CGCGGCCC CACA GGGTCGCG TTTTTTGTGATGAAT pstS 2615405 - 2616541 + | ABC transporter phosphate binding protein TERM 2002 2616576 - 2616603 + F 95 -19.2 -3.44443 | overlap 2616571 CGGCGGGCTGCGCTG CGGCGAGGTACC TGAA GGTGCCTCGCCG TTCCTGTTGTCTCAC TERM 2003 2616815 - 2616841 + G 74 -5.1 -4.46073 | gap 1, overlap 2616815 2616816 2616818 GCTGTGGGGCGGACG C-CATGCCTTGC AGAT GCAGGGCCTGAG TTTCTTCTATTCGGC TERM 2004 2616900 - 2616882 - g 77 -5.3 -4.64861 | gap 1, overlap 2616884 CCGGTCGAAAACAAA TACGGTGC GCTG GCACCG-A TCTACGGCACCCTGG TERM 2005 2616899 - 2616884 - g 75 -10.4 -3.93868 | overlap 2616882 GGTCGAAAACAAATA CGGTGC GCTG GCACCG ATCTACGGCACCCTG TERM 2006 2616941 - 2616968 + G 75 -9.1 -4.06419 | overlap 2616904 2616901 GATTGCGATGCTGAT CGCGGTGCCGG TGAGTT TCGGTATCGCG TTCTTTCTCACCGAA pstC 2616654 - 2617628 + | ABC transporter phosphate permease pstA 2617628 - 2618497 + | ABC transporter phosphate permease pstB 2618520 - 2619350 + | phosphate ABC transporter ATP-binding protein TERM 2007 2620171 - 2620135 - g 81 -15.8 -3.04144 | overlap 2620167 2620170 GGTGCATGGCGAACA GCCGCTGCCGCCGCGC GTGAA GCGCGACGACACCAGC AGCACCGGCGTCATC phoU 2619413 - 2620189 + | phosphate regulon transcriptional regulator XOO2467 2620322 - 2620729 + | hypothetical protein TERM 2008 2620756 - 2620785 + F 100 -17.1 -4.72272 | CTGTGTCGCTAGGCA GGCTCGGTCCGCG GCAA CGCGGACAGGGCC TTTTTGATGGCCGGG rnt 2621013 - 2621648 + | ribonuclease T XOO2469 2621656 - 2623038 + | putative ISXo8 transposase XOO2470 2624276 - 2623275 - | putative transposase TERM 2009 2625430 - 2625454 + G 79 -5.7 -4.59773 | opp_overlap 2625433 GCGTATTTTCCCCAA CGACGATTCGG CGC TCAAATCGTTG TTTTTGGCCGTGCGC tnpX1 2624369 - 2625571 + | IS1113 transposase XOO2479 2629824 - 2630198 + | site-specific recombinase TERM 2010 2630224 - 2630264 + T 81 -15.5 -3.04517 | opp_overlap 2630229 2630237, overlap 2630237 ACGACGCCCAACGCC AGAAACGAAAAAACCGCGC AAT GCGCGGTTTTTTCGTCACA CTTTTGCCCACCCAT TERM 2011 2630259 - 2630229 - T 100 -22.8 -3.92522 | opp_overlap 2630224 2630237, overlap 2630237 GCCCAACGCCAGAAA CGAAAAAACCGCGC AAT GCGCGGTTTTTTCG TCACACTTTTGCCCA TERM 2012 2630237 - 2630251 + T 100 -12.8 -5.14965 | opp_overlap 2630229 2630237, overlap 2630224 CCAGAAACGAAAAAA CCGCGC AAT GCGCGG TTTTTTCGTCACACT TERM 2013 2630251 - 2630237 - T 100 -12.8 -5.42514 | opp_overlap 2630237 2630224, overlap 2630229 CCAGAAACGAAAAAA CCGCGC AAT GCGCGG TTTTTTCGTCACACT secF 2631247 - 2630279 - | preprotein translocase subunit SecF TERM 2014 2631198 - 2631172 - G 75 -7.3 -4.32034 | gap 1, overlap 2631175 GCACCAGCATCAAAA TCA-GCACCGGC TTGC GCCAGCGCATGA AATCGATCTTGGTGT TERM 2015 2631269 - 2631323 + r 81 -15.1 -3.01924 | gap 1, overlap 2631293 CGGCTCTTCATATTT ACCCGCACATGGAGGTGCGGG-CTGT TGCG AGGGACTCGCACTTCTATGTGCGGGC TCTTGCGAGGGACTC secD 2633186 - 2631342 - | preprotein translocase subunit SecD yajC 2633736 - 2633383 - | preprotein translocase subunit YajC TERM 2016 2633822 - 2633875 + r 74 -11.6 -3.53224 | gap 2, opp_overlap 2633820, overlap 2633826 CAGCCGGGAATTATG CCACGCAGGTTCCACGCCGTCCGCGC CAGG GCGCGGACGGCC-GGTCTCAGC-TGG TTTCCCCCGGCAATG tgt 2635013 - 2633868 - | queuine tRNA-ribosyltransferase queA 2636267 - 2635083 - | S-adenosylmethionine:tRNA ribosyltransferase-isomerase XOO2486 2636750 - 2636319 - | AsnC/Lrp family transcriptional regulator TERM 2017 2637291 - 2637305 + G 71 -9.2 -3.72893 | GTGATGACGCCCAGC CTGGCG CAG CGCCGG TTTGATCGCGCCCTG XOO2487 2636874 - 2638370 + | L-lysine 6-aminotransferase TERM 2018 2638436 - 2638466 + T 70 -7.7 -4.07568 | gap 2, opp_overlap 2638435 GGCAGATGATGAATC TGCCACGAGCCACAT GCT GTGTGGCTCG-G-CA TTTTGACCGGCGCCA TERM 2019 2638652 - 2638632 - T 79 -11.1 -3.85698 | opp_overlap 2638627 TTTCGCTTGCATAAA TCGCCTGCA GCA TGCGGGCGA ATGACCTTAATCAAA XOO2488 2639422 - 2638715 - | hypothetical protein XOO2489 2640100 - 2639813 - | hypothetical protein XOO2490 2640304 - 2640143 - | hypothetical protein XOO2491 2640628 - 2640317 - | hypothetical protein XOO2492 2640628 - 2641407 + | IS1478 transposase XOO2493 2641535 - 2642347 + | putative ISXo8 transposase XOO2494 2642328 - 2642837 + | putative ISXo8 transposase TERM 2020 2643775 - 2643786 + G 76 -2.2 -4.8622 | overlap 2643773 GACGAGTTGCAGAGC TGCG AGGC TGCA TTTTTCATTGCCGCC XOO2495 2643076 - 2644044 + | putative transposase XOO2496 2644260 - 2644736 + | IS1478 transposase XOO2497 2645289 - 2644843 - | hypothetical protein XOO2498 2645436 - 2645290 - | hypothetical protein phy 2646509 - 2645388 - | putative phytase precursor cirA 2648746 - 2646506 - | TonB-dependent receptor upp 2649394 - 2650026 + | uracil phosphoribosyltransferase TERM 2021 2650135 - 2650166 + F 76 -7.1 -4.40804 | GCCGATTCCGGGCAC CGGCCGCGCCCGC CTGGCA GTGAGCGCAGTCG TTTTGTCAGGTGCTC TERM 2022 2650338 - 2650371 + F 91 -12.3 -4.2558 | opp_overlap 2650339, overlap 2650339 CAGGCACGCCACAGG ATGCGGGCGGCAGGC ATTC GCCTACCGCCTGCGG TTTTACTAGGGCCTG TERM 2023 2650339 - 2650370 + F 83 -15.8 -3.15027 | opp_overlap 2650339, overlap 2650338 AGGCACGCCACAGGA TGCGGGCGGCAGGC ATTC GCCTACCGCCTGCG GTTTTACTAGGGCCT TERM 2024 2650370 - 2650339 - f 71 -13.6 -2.63715 | opp_overlap 2650339 2650338 AGGCACGCCACAGGA TGCGGGCGGCAGGC ATTC GCCTACCGCCTGCG GTTTTACTAGGGCCT XOO2502 2650396 - 2650842 + | transposase XOO2504 2651466 - 2652497 + | putative transposase ggt 2654258 - 2652504 - | gamma-glutamyltranspeptidase XOO2506 2654620 - 2654294 - | ferredoxin XOO2507 2655367 - 2654810 - | hypothetical protein TERM 2025 2655207 - 2655239 + g 81 -12.8 -3.61715 | gap 1, opp_overlap 2655204, overlap 2655207 2655210 GCGGTCAACGCAGCC GG-AGCGGCGGCA GGGGTCGG TGCCGCCGCTTCC TTCTTGCAGGCGGTG TERM 2026 2655207 - 2655238 + g 75 -15.2 -2.76815 | opp_overlap 2655204, overlap 2655207 2655210 GCGGTCAACGCAGCC GGAGCGGCGGCA GGGGTCGG TGCCGCCGCTTC CTTCTTGCAGGCGGT TERM 2027 2655210 - 2655235 + g 78 -13.3 -3.53444 | opp_overlap 2655204, overlap 2655207 2655207 GTCAACGCAGCCGGA GCGGCGGCA GGGGTCGG TGCCGCCGC TTCCTTCTTGCAGGC coaD 2655860 - 2655354 - | phosphopantetheine adenylyltransferase XOO2509 2656477 - 2655857 - | hypothetical protein TERM 2028 2656683 - 2656648 - H 83 -7.5 -4.56597 | overlap 2656649 GCCCGCCTTGAAAAA TCGGCAGATGGCC GCATCCCCCA GGCCATCGGCCGC GTTGCGGCCTGGACC TERM 2029 2657291 - 2657272 - g 71 -13.6 -2.73364 | overlap 2657283 GCTGCATCTGAAGGA CGGCGAAG ACAC CTTCGCCG ATGGCTGGACGCTGC TERM 2030 2657837 - 2657821 - g 72 -8.7 -4.10657 | overlap 2657836 GGACATGCTGGAAAA GCTTGCC AAG GACAAGC CGGACGACTACGCCA htpG 2656784 - 2658622 + | heat shock protein 90 TERM 2031 2658652 - 2658671 + F 100 -11.4 -4.72272 | opp_overlap 2658646 2658652 2658655 GTTGTAATACACCAA GATCGGCG CATG CGCCGGTC TTTTTCCTGACGCAA XOO2513 2659802 - 2661184 + | putative ISXo8 transposase TERM 2032 2661303 - 2661288 - f 84 -8.2 -4.39828 | AACATGTGGAGAAAA CCCGGG TTCA CCCGAG TCACTCTTACTACAA TERM 2033 2661475 - 2661492 + G 74 -12.7 -3.21416 | GCCGACGCCCGTGCC CGCGCCT TGCA AGGCGCG TTGCTGATCGACATC TERM 2034 2661867 - 2661897 + G 70 -11 -3.41878 | overlap 2661869 GCGCGTGCTGCTGGT CGGCGCAGGCGGGT TGG GCTCGCCTGCAGCG TTCTACCTTGCGGCA TERM 2035 2662213 - 2662189 - g 78 -12.9 -3.53224 | overlap 2662176 GATGCCTGCGTCAAA CGCGGTAAACC ACT GGTTTACGGCG CCGTGCAACAGTTCG moeB 2661436 - 2662575 + | molybdopterin biosynthesis protein MoeB XOO2515 2662718 - 2662572 - | transposase TERM 2036 2662953 - 2662968 + G 74 -4.6 -4.55697 | GGCGTTGGAGATCTC GCGCTG GCCA CAGGGC TTTGTTTGTCCGCGT TERM 2037 2663686 - 2663702 + G 74 -10.1 -3.70902 | opp_overlap 2663681, overlap 2663687 CTGGCAGAGACGATG TGGCGGT TCA ACCGCCG TTTCGATCTGACCCG XOO2516 2662801 - 2663817 + | transposase XOO2517 2665186 - 2663795 - | IS1478 transposase TERM 2038 2665240 - 2665228 - R 71 -4.8 -4.4773 | GTAGAGTAACGAAAA CTGG CAGTT CCAG CACGCCAAAACCGCA XOO2518 2665473 - 2665306 - | transposase XOO2519 2665691 - 2665470 - | transposase XOO2520 2665957 - 2667006 + | ISxac1 transposase XOO2521 2667634 - 2667092 - | IS30 family transposase XOO2522 2667859 - 2667665 - | hypothetical protein XOO2523 2668392 - 2668195 - | transposase XOO2524 2668745 - 2669008 + | putative transposase XOO2525 2669063 - 2669449 + | putative transposase XOO2526 2669431 - 2669718 + | putative transposase moeA 2671220 - 2670000 - | molybdopterin biosynthesis TERM 2039 2671109 - 2671131 + g 75 -7.7 -4.25104 | CGGCCGAGATGCGTC CATCGGCAC GCGAG GTGGCGATG TTTTCATCGGGCGAA engA 2672932 - 2671535 - | GTP-binding protein EngA TERM 2040 2672408 - 2672458 + g 71 -10.3 -3.61715 | gap 1, overlap 2672387 GCGCACGCGCGCGGG GTCGTTGTCCAGCAGCTCGCCGGA CCCT TCCT-CGGGCAGCCGGGCACCGAC TTCTTCCAGCAACTC XOO2530 2674163 - 2672943 - | hypothetical protein TERM 2041 2672972 - 2672982 + g 70 -4.6 -4.36914 | overlap 2672956 GGAAGGCGGTGAGAT CGCC GTC GGTG TTTTGTACCAGCAAA XOO2531 2674798 - 2674160 - | hypothetical protein TERM 2042 2674891 - 2674857 - R 85 -5.8 -5.04601 | gap 2 GGGATAAATGAAAAA CCGCAGT-CC-GCTTC ACTCG GAAGCAGGTACCACGG AGCCGTCGGAGGATA XOO2532 2675729 - 2674869 - | hypothetical protein TERM 2043 2675044 - 2675057 + g 71 -3.8 -4.56775 | opp_overlap 2675028 GTGCGACGCTCGCCG GCAC GTATCA GTGC TTTTTCGACCGCGCT pilF 2676538 - 2675726 - | fimbrial biogenesis protein TERM 2044 2675929 - 2675898 - G 83 -9.4 -4.36914 | gap 1, overlap 2675916 CGTCGTTCGATAAAA GCGCGGGCTTCGAAA TAA TTGCGACGCCC-CGC TTCCAGGCGCGCCAT TERM 2045 2676314 - 2676364 + g 70 -7.5 -3.96148 | gap 1, overlap 2676315 GGCACGCACCTGTTC TTCGGCACTG-GCGTAATCGCCGG TCTG CAGGCGATTACGGGCGAGGCCGAG TTTCTCCTGCACCGC XOO2534 2677730 - 2676525 - | hypothetical protein TERM 2046 2677333 - 2677314 - G 82 -6.4 -4.65916 | GGCAGTTGAACAAAA GCTACAGT TCAA ACCGCAGC CGACCTGGGAGGACA ndk 2678174 - 2677749 - | nucleoside diphosphate kinase TERM 2047 2678246 - 2678231 - H 100 -10.4 -6.17184 | ATCATGAAAAAAAAA CCGCGT CAAA ACGCGG GCTTAGGCTTCTTTG XOO2536 2678394 - 2679026 + | TetR family transcriptional regulator TERM 2048 2681387 - 2681371 - g 83 -2.1 -5.1861 | CCCAGCAGGAAAAAA CCCAGGC GCG GATTGGG CACATGCTCAAGACG fadB 2679051 - 2681423 + | 3-hydroxyacyl-CoA dehydrogenase fadA 2681581 - 2682786 + | acetyl-CoA acetyltransferase TERM 2049 2682833 - 2682860 + F 100 -18.4 -4.18494 | opp_overlap 2682822 ATCAGGATGCTACAG CGGCCGGAGAGC CATC GCTCGCCGGCCG TTTTCCATGCGGATG TERM 2050 2683181 - 2683211 + G 89 -5.3 -5.18726 | GGTGATTGCCAGCAT TGTCGCGGCGCTG GCCGG CACCGCTTCGGCA TTTTTCTTGTGGGCA TERM 2051 2683528 - 2683576 + G 83 -14.7 -3.1855 | gap 2, opp_overlap 2683533 2683535, overlap 2683534 TGCTGCGCCTGCGCA ACGAAGACCGGCGCATGGTGCTG ATGGC CGGCATCA-GCGCCGG-CTTCGC TTCGGTGTTCGGCAC TERM 2052 2683534 - 2683571 + G 71 -12 -3.20878 | gap 1, opp_overlap 2683533 2683535, overlap 2683528 GCCTGCGCAACGAAG ACCGGCGCATGGTGCTG ATGGC CGGCATCA-GCGCCGGC TTCGCTTCGGTGTTC TERM 2053 2683570 - 2683535 - g 71 -11.8 -3.23853 | gap 1, opp_overlap 2683534 2683528, overlap 2683533 CCTGCGCAACGAAGA CCGGCGCATGGTGCTGA TGG CCGGCATCA-GCGCCGG CTTCGCTTCGGTGTT XOO2539 2683107 - 2684438 + | hypothetical protein crcB 2684721 - 2685224 + | hypothetical protein XOO2541 2685221 - 2685547 + | hypothetical protein XOO2542 2686955 - 2685579 - | recombination factor protein RarA TERM 2054 2689841 - 2689861 + G 77 -5.3 -4.65895 | AACCACTTTCATCAG GCCGTTGGT AAC GCCAGCCGC TTTTTGCATGAGGGC TERM 2055 2690294 - 2690335 + G 74 -10.9 -3.59738 | gap 1, opp_overlap 2690297, overlap 2690296 2690297 GTGCCACGTCGGGGC AAAGGCCAGGAATTG-GAGC AAC GCGCGCAATTCCTGGCCATG TTTGAACATCTGCTG TERM 2056 2690296 - 2690333 + G 77 -13.5 -3.37487 | gap 1, opp_overlap 2690297, overlap 2690294 2690297 GCCACGTCGGGGCAA AGGCCAGGAATTG-GAGC AAC GCGCGCAATTCCTGGCCA TGTTTGAACATCTGC TERM 2057 2690297 - 2690332 + G 81 -17 -2.62171 | gap 1, opp_overlap 2690297, overlap 2690296 2690294 CCACGTCGGGGCAAA GGCCAGGAATTG-GAGC AAC GCGCGCAATTCCTGGCC ATGTTTGAACATCTG TERM 2058 2690332 - 2690297 - g 91 -17 -3.53444 | gap 1, opp_overlap 2690296 2690294 2690297 CCACGTCGGGGCAAA GGCCAGGAATTG-GAGC AAC GCGCGCAATTCCTGGCC ATGTTTGAACATCTG XOO2543 2687192 - 2691358 + | hypothetical protein lolA 2692100 - 2691471 - | outer-membrane lipoprotein carrier protein XOO2545 2694135 - 2692207 - | hypothetical protein ftsK 2696658 - 2694298 - | cell division protein TERM 2059 2695391 - 2695444 + g 78 -13.2 -3.54602 | gap 3, overlap 2695374 2695388 GCCAGGTCGGCCACG GTCGGCCGGCCGGC-GATGTCCTTGCC AAG GGCCAG--CGTCAGCGGGCTGGCCGAC TTGTCGTATTCCTTG TERM 2060 2696789 - 2696773 - H 100 -10.8 -4.86621 | opp_overlap 2696773, overlap 2696783 ACGCTTAACGAAAAA CGCCGC ACAAG GCGGCG TCGATTACGCGGGCT trxB 2696942 - 2697910 + | thioredoxin reductase TERM 2061 2698201 - 2698189 - g 75 -9.1 -3.96068 | opp_overlap 2698189 TTACCTCAAGAACAA CTCGC ACG GCGAG TTCGTGTTCGACCAC XOO2548 2697923 - 2699089 + | hypothetical protein XOO2549 2699315 - 2699683 + | hypothetical protein XOO2550 2699982 - 2700383 + | hypothetical protein TERM 2062 2700978 - 2700996 + G 81 -3.1 -5.00616 | gap 1 CGGCGGGATCTACGG CGTCGCGG TCGG CCG-GATG TTTTTTGGCGAAAGC TERM 2063 2701066 - 2701029 - g 71 -14.2 -2.73124 | gap 2, overlap 2701028 GTTCAGTGGGGAAAG CGGCGGTTCCAAGGTGGC ACTG GCCGCCTTGG--CCGCCG ATCTGCATGGCCGAG aat 2700472 - 2701269 + | leucyl/phenylalanyl-tRNA--protein transferase infA 2701332 - 2701568 + | translation initiation factor IF-1 TERM 2064 2701595 - 2701611 + T 91 -9.3 -4.46212 | opp_overlap 2701592, overlap 2701596 GCTGAGACGCAAGGC GGCGGCC ATT GGCCGCG TTTTGTCGTGCCCGC TERM 2065 2701596 - 2701610 + T 74 -12.8 -3.27406 | opp_overlap 2701592, overlap 2701595 CTGAGACGCAAGGCG GCGGCC ATT GGCCGC GTTTTGTCGTGCCCG TERM 2066 2701798 - 2701815 + T 84 -8.3 -4.53034 | opp_overlap 2701798, overlap 2701793 CTCAGGACGTAAAAA GCCGCGC TTTC GAGCGGC TTTTCCTTATCTGCC TERM 2067 2701815 - 2701798 - T 88 -8.3 -4.68593 | opp_overlap 2701798 2701793 CTCAGGACGTAAAAA GCCGCGC TTTC GAGCGGC TTTTCCTTATCTGCC clpA 2704131 - 2701849 - | ATP-dependent Clp protease subunit clpS 2704655 - 2704275 - | ATP-dependent Clp protease adaptor protein ClpS mutT 2704822 - 2705304 + | 7,8-dihydro-8-oxoguanine-triphosphatase TERM 2068 2705477 - 2705495 + G 72 -8.8 -4.05788 | opp_overlap 2705453 CGCGGTCGCGGTCTG CGGCGTGC TGG GTATGCCG TTTCATTTCCGCGAC trmU 2705301 - 2706437 + | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase XOO2557 2706434 - 2707051 + | hypothetical protein TERM 2069 2707566 - 2707554 - g 71 -9.1 -3.73072 | overlap 2707558 AATCGCGTCAGCAAA GCCAG GCA CTGGC CCGCATCGTCGACCG TERM 2070 2707825 - 2707850 + G 81 -16.9 -2.70932 | opp_overlap 2707817 2707814 CGAAGCAGCACGTGC CGGTGAAGCCG GCCG CGGCTTCGCCG TGGTTGCCGACGAGG mcp 2707112 - 2708389 + | chemotaxis protein TERM 2071 2708425 - 2708442 + F 86 -12.7 -4.06904 | CGCTGATTCCGACAT TCCCCGG CCTT CCGGGGA TTTGTCGTTCCCTAC XOO2559 2708475 - 2708762 + | hypothetical protein TERM 2072 2708771 - 2708802 + F 73 -10.9 -3.55946 | gap 2, overlap 2708784 GCGCTGATGCGATAC CGGCGGGTCGTGCCT CGGC AGGCGC--CCCGCCG TGTTGTTTGAACTGC TERM 2073 2708784 - 2708804 + F 71 -8.1 -3.9392 | overlap 2708771 ACCGGCGGGTCGTGC CTCGGCAGG CGC CCCGCCGTG TTGTTTGAACTGCCC TERM 2074 2709628 - 2709646 + G 75 -4.4 -4.69053 | overlap 2709617 CGCAGCCGTGCGATC GCGGCCGG CTA TCTGTCGC TTTTCTTCCCTGATA XOO2560 2709037 - 2709720 + | hypothetical protein XOO2561 2712707 - 2710191 - | hypothetical protein TERM 2075 2711428 - 2711451 + g 74 -5.2 -4.4727 | gap 1, overlap 2711448 GCCAATACCTGGCCG CGCTCGTGCGC CTC GCGAATG-GCG TTTTCTGCCTGTTCG XOO2562 2713098 - 2715230 + | HrpX related protein pdeA 2715234 - 2716955 + | c-di-GMP phosphodiesterase A TERM 2076 2716995 - 2716984 - T 72 -7.2 -4.11484 | opp_overlap 2716983, overlap 2716985 GGGAATTGGCTAAAA GCGG GCTC CCGC GTCGTTGCGCCAGAT XOO2564 2718310 - 2717084 - | histidine kinase XOO2565 2718808 - 2718476 - | hypothetical protein TERM 2077 2718622 - 2718608 - G 74 -12.8 -3.18264 | opp_overlap 2718607 TCGGCGAGCCAGCAA CGCGCC ATT GGCGCG ATTGGCTTCGGCCAG flgM 2719135 - 2718824 - | flagellar protein flgA 2719846 - 2719202 - | flagellar basal body P-ring biosynthesis protein FlgA TERM 2078 2720285 - 2720301 + G 77 -5.1 -4.62069 | CCTGCTGCTGTTCCG GCTGG GCGGACG CCAGC TTTTTGGCGTGAACG cheV 2720205 - 2721149 + | chemotaxis protein flgB 2721464 - 2721862 + | flagellar basal body rod protein FlgB flgC 2721890 - 2722273 + | flagellar basal body rod protein FlgC flgD 2722311 - 2722976 + | flagellar basal body rod modification protein flgE 2723008 - 2724231 + | flagellar hook protein FlgE flgF 2724377 - 2725132 + | flagellar basal body rod protein FlgF TERM 2079 2725898 - 2725854 - g 72 -12.7 -3.14344 | overlap 2725841 GACCTGTTGTACCAA CAGGTGCGTGCGCCCGGCGGC TCG ACCTCCGCGCAGACGCAGCTG CCGACCGGCCTGCAA flgG 2725713 - 2726498 + | flagellar basal body rod protein FlgG TERM 2080 2726844 - 2726823 - g 80 -12.3 -3.75738 | CAGCACCAGCAAGAA GGACGCCAC CACG ATGGCGTCC CCCACCCTGCTGGGT flgH 2726536 - 2727228 + | flagellar basal body L-ring protein TERM 2081 2727467 - 2727451 - g 75 -4.3 -4.61231 | GCAGAGCCTGAAAAA CCTGCTC GGC GAACTGG GCGTCAATGTTCCGG TERM 2082 2727518 - 2727508 - g 70 -2.4 -4.62069 | CCCGCAGCTGAAAAA CGTC GCG GCCG TGGCCATCCATGCCG flgI 2727239 - 2728357 + | flagellar basal body P-ring protein TERM 2083 2729346 - 2729303 - g 74 -5.2 -4.56597 | gap 1, overlap 2729306 2729308 GCGGCTGCTGAAAAA CAACAGCCGTTACCAGCCCGC GCT GCAGGCCGGCACCGAC-ATCA AGGGTTTTGCACGCG TERM 2084 2729344 - 2729306 - g 75 -7.2 -4.40561 | overlap 2729303 2729308 GCTGCTGAAAAACAA CAGCCGTTACCAGCCCGC GCT GCAGGCCGGCACCGACAT CAAGGGTTTTGCACG TERM 2085 2729342 - 2729308 - g 86 -14.2 -3.80746 | overlap 2729306 2729303 TGCTGAAAAACAACA GCCGTTACCAGCCCGC GCT GCAGGCCGGCACCGAC ATCAAGGGTTTTGCA flgJ 2728359 - 2729537 + | peptidoglycan hydrolase flgK 2729549 - 2731423 + | flagellar hook-associated protein FlgK TERM 2086 2731673 - 2731662 - g 70 -5.8 -4.25104 | overlap 2731663 CGGGCTGCAGGAAAA TGCG CTGT CGCA GGCCGGCGACAAAAT TERM 2087 2731837 - 2731862 + G 77 -11.1 -3.72576 | gap 1 GGCCGCTATCTGTTC GGCGGCACTGCC GAC GGCAGCGC-GCC TTTCATCAAGAGCAG flgL 2731423 - 2732628 + | flagellar hook-associated protein FlgL TERM 2088 2732654 - 2732693 + F 80 -5.1 -4.85782 | gap 2, overlap 2732652 GAAAACCTGGGTTTT CTTCG-CT-CCTGCGCA TGAGCATT TGCGCAGGCGGACGGAG TTTATTTTTCGAAAA TERM 2089 2734097 - 2734044 - g 80 -14.5 -3.07043 | gap 1 CCGACTACGCCAAGA GCACCGCCGAACTGACCCGCACGCAG ATC CTGCA-GCAGGCCGGTACTGCGATGC TGGCCCAGGCCAAGT fliC 2732948 - 2734147 + | flagellin TERM 2090 2734199 - 2734216 + F 100 -12.7 -5.60993 | opp_overlap 2734199 CGCAGCAAGTCCAAA GCCCCTC TTCG GAGGGGC TTTTTTTATGGCCGC TERM 2091 2734216 - 2734199 - f 77 -12.7 -3.67976 | opp_overlap 2734199 CGCAGCAAGTCCAAA GCCCCTC TTCG GAGGGGC TTTTTTTATGGCCGC fliD 2734419 - 2735744 + | flagellar protein fliS 2735895 - 2736308 + | flagellar protein XOO2584 2736305 - 2736610 + | hypothetical protein TERM 2092 2736969 - 2736979 + G 70 -5.4 -4.41616 | CCACGCACCAGGCAC CACT GGC AGTG TTTGTTTGCAGCCAT XOO2585 2736610 - 2737176 + | hypothetical protein XOO2586 2737247 - 2737879 + | response regulator TERM 2093 2737881 - 2737901 + F 75 -13.9 -3.02511 | opp_overlap 2737867 ACGAGTTGGTCTGAC GCGCCCCCC GTG GGCGGGCGC TGTTGGGCCAATCGA rpoN 2738103 - 2739506 + | RNA polymerase sigma-54 factor XOO2588 2739515 - 2739895 + | response regulator TERM 2094 2739916 - 2739963 + GF 86 -13.5 -3.9279 | gap 1, overlap 2739917 TCCCGCATTCTGTTG ATCGA-CAGTGACGCCGTGCGC GCCGA GCGCACCGTGTCGCTGCTCGAA TTTATGGACTTCAAT TERM 2095 2739917 - 2739962 + GF 87 -17 -2.95192 | gap 1, overlap 2739916 CCCGCATTCTGTTGA TCGA-CAGTGACGCCGTGCGC GCCGA GCGCACCGTGTCGCTGCTCGA ATTTATGGACTTCAA TERM 2096 2740545 - 2740528 - gf 78 -4 -4.72272 | overlap 2740505 2740529 TTCGGCCACGAAAAA GGCGCC TTCACC GGCGCG CTGACCACCCGCAAG fleQ 2739892 - 2741376 + | transcriptional regulator TERM 2097 2742134 - 2742118 - gf 70 -2.1 -4.62069 | opp_overlap 2742110, overlap 2742120 CGGGCATCTGAAAAA CTTCGGC TTC GTCGATG AAACCACGGTGGTAG vioA 2741282 - 2742604 + | nucleotide sugar transaminase acp 2742570 - 2742893 + | acyl carrier protein fabH 2742899 - 2743939 + | 3-oxoacyl- synthase fabG 2743855 - 2744709 + | 3-oxoacyl- reductase XOO2594 2744706 - 2745458 + | dehydrogenase XOO2596 2746112 - 2747257 + | ring hydroxylating dioxygenase alpha-subunit XOO2597 2747247 - 2747870 + | hypothetical protein TERM 2098 2748289 - 2748299 + G 79 -2.4 -4.98255 | overlap 2748286 GATCCCAGGGTTCGA GCAG CGC CCGC TTTTTCTGCTTCAAC XOO2598 2747876 - 2749390 + | hypothetical protein TERM 2099 2752003 - 2752041 + G 74 -15.3 -2.54193 | gap 1 TTCGTTGGACCCGGG CGCCGGCTT-CGCGTTGG CCGA CCCACGCGCGAGCTGGCG TCCATTGCAGTCATG TERM 2100 2752240 - 2752199 - g 80 -15.2 -3.11634 | gap 1 CTGGAGATCAGCGAA CTGGCGCGTCAGGATC-CC GATGT GGTGATCCTGCAGCGCCAG GTCGGCGAGGCGCGA rbfC 2749499 - 2753050 + | O-antigen biosynthesis protein TERM 2101 2753838 - 2753815 - g 71 -7.4 -4.08974 | gap 1 AGCCCAGCACACAAA TCG-CTGCCTG CTC CCGGCAGCCGA GGCACAGCCCCCTCC fliE 2753791 - 2754306 + | flagellar protein fliF 2754320 - 2756044 + | flagellar MS-ring protein fliG 2756028 - 2757044 + | flagellar protein fliH 2757041 - 2757637 + | flagellar protein fliI 2757634 - 2759010 + | flagellar protein fliJ 2759014 - 2759469 + | flagellar FliJ protein TERM 2102 2759657 - 2759634 - g 73 -12.4 -3.30124 | gap 1 CCGCAGGCGCCAGAA CGCGTGCCCGC CAA GCAGGC-CGCG CCCAAGTCCAACCAG TERM 2103 2759741 - 2759702 - g 81 -14.2 -3.44527 | gap 1, overlap 2759685 2759684 CAGCGACGACGACAA CCGCGACGACGCGGCCGGC GAT GCC-ACCGCACGGCCGCGG GCGCAGGACGGCGAT TERM 2104 2759889 - 2759851 - g 71 -12.3 -3.29958 | gap 1, overlap 2759843 2759845 2759849 2759852 GCAAGAACACCAAGA CCGCCGCCACGGCGAGCG AGGA CGCAC-CCGCAGAGGCGG CAACTGCATCGGCGA fliK 2759466 - 2760773 + | flagellar protein TERM 2105 2760800 - 2760780 - f 72 -14 -2.6914 | overlap 2760779 TACGCCTGAGATAAC GTGCCGGG CACGC CCCGGCAC CGCTGAACATCGCGC TERM 2106 2760837 - 2760870 + F 93 -8.1 -5.03314 | gap 1, opp_overlap 2760810, overlap 2760839 TGCCTGCCGATGACG CGCCTGC-ATCCTCGC AGC GCAAGGATTGCGGGGG TTTTTTCGGCCTGCG fliL 2760965 - 2761489 + | flagellar protein fliM 2761500 - 2762513 + | flagellar motor switch protein FliM fliN 2762510 - 2762848 + | flagellar protein fliO 2762845 - 2763261 + | flagellar protein fliP 2763263 - 2764108 + | flagellar biosynthesis protein FliP TERM 2107 2764174 - 2764225 + F 83 -7.3 -4.59069 | gap 2, opp_overlap 2764178 2764180, overlap 2764165 2764169 2764175 2764191 TCGAAGGGGCCGCAC AGCACAGCCGTACTGCT-CA-GGCT GTGC GGCTGTGCGGCTGTGCGGCTGTGCA TTTTGTCATTGTGCT TERM 2108 2764292 - 2764271 - f 82 -5.7 -4.82901 | overlap 2764273 GGCTCTTTACAAAAA CCTCGCGCA TCCA TGCGCGCCG CCCCTGTGGGGTTTG fliQ 2764526 - 2764795 + | flagellar biosynthesis fliR 2764808 - 2765599 + | flagellar biosynthetic protein TERM 2109 2766445 - 2766466 + G 72 -8.6 -4.07568 | GCGGCACGATCGTCT CGCGCGCC CCCGGC GGCGCCCG TTTTACCGAACACCC TERM 2110 2766611 - 2766653 + G 100 -19.9 -3.21099 | gap 1 GCATTGGACCGATAT CGGCGCCGACCAGGGCCTCC AGCT GAACGCCCTGGTCGGC-CCG TTGCTGCTGCAAAGC XOO2614 2765694 - 2768666 + | GGDEF family protein TERM 2111 2768988 - 2768972 - f 74 -13.7 -2.89742 | TGCAAGCGTGAGACA CCGCGCA ATT TGCGCGG AACGCATGCGCCGAT TERM 2112 2771420 - 2771401 - g 70 -2 -4.59773 | overlap 2771415 2771416 CTGGAGCGCGAAAAA CGCGAACT GGAA AACGCGCG CGCGGCATTGGCCTT TERM 2113 2771456 - 2771415 - g 79 -10.2 -4.19506 | gap 3, overlap 2771401 2771416 ACGCGAACTGGAAAA CGCGCG-CGCGGCATTGGCCT TGA AGGCC-A-GCCACGACGCGCT GACCGGCCTGCTCAA TERM 2114 2771455 - 2771416 - g 76 -13.7 -3.11222 | gap 3, overlap 2771401 2771415 CGCGAACTGGAAAAC GCGCG-CGCGGCATTGGCCT TGA AGGCC-A-GCCACGACGCGC TGACCGGCCTGCTCA XOO2615 2769025 - 2771946 + | GGDEF family protein TERM 2115 2772900 - 2772915 + GF 73 -8.2 -4.08216 | TGGCGCTGGTCATTT CGGTGC TGTC GCGCCG TTTTCAGCAGCGTAC TERM 2116 2773123 - 2773176 + GF 72 -11 -3.53444 | opp_overlap 2773123 2773124 2773126 CTTCAAGGTGATCAA CG-ACGGCTACGGCCATCAGCTGGGC GACC GCCT-GCTGGTGGTGGTGGCCGAACG TTTGAACGCGCATCG XOO2616 2772197 - 2774674 + | GGDEF family protein flhB 2774533 - 2775663 + | flagellar biosynthesis protein FlhB flhA 2775660 - 2777753 + | flagellar biosynthesis protein FlhA TERM 2117 2777855 - 2777802 - f 72 -12.3 -3.30243 | overlap 2777792 2777853 ACGCACGCCTTAGAA GCGCCCCCGAGCGCGACCGGGCTTA CCGG CAAGGCCCATCGCGCCCAACGACGC ACACGTGCACCCGGC flhF 2778338 - 2779996 + | flagellar biosynthesis regulator FlhF TERM 2118 2780811 - 2780825 + GF 75 -3.4 -4.72272 | overlap 2780813 GCTCCCACCGTGCCG CGCGGC AAT GTCGAG TTTTTCGTCGAACGC fleN 2779908 - 2780867 + | flagellar biosynthesis switch protein fliA 2780864 - 2781619 + | RNA polymerase sigma factor FliA cheY 2781654 - 2782046 + | chemotaxis protein TERM 2119 2782458 - 2782425 - g 82 -4 -5.00616 | gap 3 CGCTGCTGGAAAAAA TGCGCCA-CAAC--CTC ACC GAGCTGTCGCTGGCGCA GAGCTACCAGGACCT cheZ 2782046 - 2782672 + | chemotaxis related protein cheA 2782675 - 2784333 + | chemotaxis related protein TERM 2120 2784432 - 2784402 - f 71 -13.3 -3.05384 | opp_overlap 2784405 2784408, overlap 2784405 2784408 GGCTCCCTGATCGAA CGACAACGGCCGC GTACT GCGGCCGTTGTTA TTTCACTAGTCGCCC TERM 2121 2784429 - 2784405 - f 84 -17.2 -2.75064 | opp_overlap 2784405 2784408, overlap 2784402 2784408 TCCCTGATCGAACGA CAACGGCCGC GTACT GCGGCCGTTG TTATTTCACTAGTCG TERM 2122 2784405 - 2784429 + F 100 -17.9 -3.97674 | opp_overlap 2784405 2784402 2784408, overlap 2784408 TCCCTGATCGAACGA CAACGGCCGCG TAC TGCGGCCGTTG TTATTTCACTAGTCG TERM 2123 2784408 - 2784426 + F 93 -13.8 -4.10744 | opp_overlap 2784405 2784402 2784408, overlap 2784405 CTGATCGAACGACAA CGGCCGCG TAC TGCGGCCG TTGTTATTTCACTAG TERM 2124 2784426 - 2784408 - f 76 -13.1 -3.52652 | opp_overlap 2784408 2784405, overlap 2784405 2784402 CTGATCGAACGACAA CGGCCGC GTACT GCGGCCG TTGTTATTTCACTAG XOO2625 2784473 - 2784733 + | IS1478 transposase tnpA 2784737 - 2785186 + | transposase XOO2627 2785217 - 2785759 + | IS30 family transposase TERM 2125 2785847 - 2785829 - f 100 -14.6 -4.8622 | CCTGCCAAGCAAAAA CCTCGCCT GGA AGGCGAGG CCTGGATCATTCAAC XOO2628 2786645 - 2788027 + | putative ISXo8 transposase XOO2629 2788177 - 2788665 + | putative transposase TERM 2126 2788886 - 2788897 + T 74 -2.2 -4.8622 | overlap 2788884 GACGAGTTGCAGAGC TGCG AGGC TGCA TTTTTCATTGCCGCC TERM 2127 2789756 - 2789742 - T 77 -4.4 -4.86862 | overlap 2789753 TGTAAAAAATGAAAA TTAAAT GAA ATTTAA AATATTTAAGGAATT XOO2631 2795060 - 2789820 - | Rhs family protein TERM 2128 2794137 - 2794156 + g 93 -13.6 -4.13767 | CAGCAAGGTGTAGTC CGCTCCTG GAAA CAGGAGCG TTTTCGGCTGGACAA XOO2632 2795839 - 2795090 - | glutamate synthase domain-containing 2 TERM 2129 2796261 - 2796250 - H 74 -2.2 -4.8622 | overlap 2796251 GCGCGCAATGAAAAA TGCA GCCT CGCA GCTCTGCAACTCGTC TERM 2130 2799078 - 2799089 + G 76 -2.2 -4.8622 | overlap 2799076 GACGAGTTGCAGAGC TGCG AGGC TGCA TTTTTCATTGCCGCC XOO2636 2798379 - 2799347 + | putative transposase TERM 2131 2801241 - 2801265 + T 73 -2.8 -4.7497 | overlap 2801242 TAACGGAGATAGGTG TGTCCGGA TTTATTTGC TCCGGGCG TTTTTGATCAGTCGG acrD 2808250 - 2804750 - | transport protein czcB 2809380 - 2808628 - | cation efflux system protein XOO2645 2809585 - 2809977 + | cytochrome C4 cycM 2809986 - 2810447 + | cytochrome C552 TERM 2132 2810467 - 2810448 - T 74 -9.2 -3.9122 | opp_overlap 2810447 2810454, overlap 2810445 CACGGCGTCAAATAA GCGCACCG TGCG CGCTGCGC CGTTCTTATCACGAA TERM 2133 2810750 - 2810768 + T 100 -13.8 -5.49729 | opp_overlap 2810750 GCCAATCATCTGAAA GCCCTGGC ACT GCCGGGGC TTTTTTTGCCTGCTT TERM 2134 2810768 - 2810750 - T 75 -11.6 -3.63895 | opp_overlap 2810750 GCCAATCATCTGAAA GCCCTGGC ACT GCCGGGGC TTTTTTTGCCTGCTT TERM 2135 2811708 - 2811726 + T 100 -13.8 -5.72616 | opp_overlap 2811708 GCCAATCATGTGAAA GCCCTGGC ATT GCCGGGGC TTTTTTTGTCTGCGT TERM 2136 2811726 - 2811708 - T 75 -11.6 -3.63895 | opp_overlap 2811708 GCCAATCATGTGAAA GCCCTGGC ATT GCCGGGGC TTTTTTTGTCTGCGT XOO2647 2812252 - 2812001 - | hypothetical protein TERM 2137 2812531 - 2812506 - H 80 -5.3 -4.86133 | GATAGACAGCAAAAA GCCCCACCAGA TTTC TCCAGAAGGGC TCTACACTGGTGCTG TERM 2138 2813071 - 2813086 + G 74 -4.6 -4.55697 | GGCGTTGGAGATCTC GCGCTG GCCA CAGGGC TTTGTTTGTCCGCGT TERM 2139 2813804 - 2813820 + G 74 -10.1 -3.70902 | overlap 2813805 CTGGCAGAGAGGATG TGGCGGT TCA ACCGCCG TTTCGATCTGACCCG XOO2648 2812919 - 2813935 + | transposase XOO2649 2813942 - 2815099 + | putative ISXo8 transposase TERM 2140 2815483 - 2815472 - T 74 -2.2 -4.8622 | overlap 2815473 GGCGGCAATGAAAAA TGCA GCCT CGCA GCTCTGCAACTCGTC cydC 2818311 - 2816572 - | ABC transporter ATP-binding protein TERM 2141 2817989 - 2817955 - GT 76 -5.7 -4.56597 | gap 1, opp_overlap 2817964 2817965 2817966 2817968, overlap 2817956 2817958 CGCGCGGCGGAAAAA CCACACCCGCAGATCG CGGG CGATGCGCAGA-GTGG CATCGTGCCCGATCA TERM 2142 2817964 - 2818005 + gT 72 -2.9 -4.59773 | gap 1, opp_overlap 2817958 2817956 2817955, overlap 2817965 2817966 2817968 GAAAAACCACACCCG CAGATCGCGGGCGATGCGCA GAG TG-GCATCGTGCCCGATCAA TTTTTCGCCATAACG strW 2820107 - 2818254 - | transport protein TERM 2143 2818570 - 2818558 - GR 76 -9.1 -4.07687 | overlap 2818562 AGTTGCGCGGCAAAA CGCAG CAC CTGCG CCGCCTCCGCCACCG TERM 2144 2819212 - 2819202 - GR 81 -4.6 -4.91109 | overlap 2819203 TGTGGACGATAAAAA CGCG ATG CGCA GCACTTTCAGCGAAC XOO2657 2821475 - 2820507 - | transposase TERM 2145 2820536 - 2820562 + g 71 -7.3 -4.18494 | gap 1, overlap 2820536 CAACGCTGTTGAGGA C-CTCCTCGGAG AAGA CTTCGAGGGGCG TTTTGAATCCAAGTA TERM 2146 2821894 - 2821883 - H 74 -2.2 -4.8622 | overlap 2821884 GGCGGCAATGAAAAA TGCA GCCT CGCA GCTCTGCAACTCGTC cydA 2822708 - 2822971 + | cytochrome D ubiquinol oxidase subunit I cydB 2823020 - 2823277 + | cytochrome D ubiquinol oxidase subunit II XOO2662 2823350 - 2823460 + | hypothetical protein TERM 2147 2823634 - 2823606 - Tf 100 -17.6 -4.12188 | opp_overlap 2823606 2823613, overlap 2823613 CGACCAGTTTCAAAA CACAAAACCGGC CCAGC GCCGGTTTTGTG TTTTCAGGCGTCGCT TERM 2148 2823606 - 2823634 + TF 100 -17.6 -4.09864 | opp_overlap 2823606 2823613, overlap 2823613 CGACCAGTTTCAAAA CACAAAACCGGC CCAGC GCCGGTTTTGTG TTTTCAGGCGTCGCT TERM 2149 2823627 - 2823613 - Tf 90 -8.5 -4.89567 | opp_overlap 2823606 2823613, overlap 2823606 TTTCAAAACACAAAA CCGGC CCAGC GCCGG TTTTGTGTTTTCAGG TERM 2150 2823613 - 2823627 + TF 90 -8.5 -4.89567 | opp_overlap 2823613 2823606, overlap 2823606 TTTCAAAACACAAAA CCGGC CCAGC GCCGG TTTTGTGTTTTCAGG TERM 2151 2823722 - 2823756 + GT 77 -12 -3.60971 | overlap 2823728 GTCGTCCGCCCAGTT GCGTGGTCGCGGCCTG GTG CTGGCCGCGATTCTGC TTTCCGCATTCAACT TERM 2152 2823728 - 2823750 + GT 87 -14.8 -3.60419 | overlap 2823722 CGCCCAGTTGCGTGG TCGCGGCCTG GTG CTGGCCGCGA TTCTGCTTTCCGCAT XOO4840 2824528 - 2824391 - | hypothetical protein TERM 2153 2824631 - 2824655 + Gr 77 -12.1 -3.61103 | GATCCTGTGGGTGAC CCTGCTCGGCC TGG GGTCGAGCACG TTTCCGCTGGCATTG cynX 2823630 - 2824946 + | MFS transporter gaa 2826840 - 2824927 - | glutaryl-7-ACA acylase precursor proA 2828647 - 2827208 - | gamma-glutamyl phosphate reductase TERM 2154 2827260 - 2827245 - G 84 -9 -4.4767 | CCACGCACCACAAAA CGCTCA ACGG TGAGCG CCTCCAGACCCATCG TERM 2155 2827376 - 2827409 + g 80 -13.8 -3.31792 | opp_overlap 2827349 GTTGACCATCACCAC TGCCGAGCGGAGCG ACTGCA CGAACCGCTCGGCA TTGTCGGGGTCCTGC proB 2829918 - 2828764 - | gamma-glutamyl kinase TERM 2156 2829618 - 2829604 - G 91 -11.4 -4.56597 | CGGGCGCTCGAAAAA GCGCTG CCA CAGCGC GATCAACTGCGCCTG TERM 2157 2829880 - 2829828 - G 72 -12.9 -3.15544 | gap 4 CGCCATCGGCAGCAA GCAGGCTACTGCCGACCTTGAGC-ACG GCA CGCCGC-CACGG-CGGCAGT-GCCTGC TCGGCAAAGGGCGAC XOO2667 2830192 - 2829932 - | hypothetical protein TERM 2158 2830098 - 2830071 - G 86 -14.8 -3.55444 | CTGCGATCGCTGAAA CCACCGGTCAGC GCGA GCTGCCCGGCGG CGCGCAACGCATCGA XOO2668 2830557 - 2830192 - | hypothetical protein argH 2831945 - 2830557 - | argininosuccinate lyase TERM 2159 2831805 - 2831828 + g 71 -3.8 -4.56597 | CAGGAAGCTCTGGAT CTTGGCGT CCACCGCC ACGCCGGG TTTTTGCCACAACAG argC 2832926 - 2831976 - | N-acetyl-gamma-glutamyl-phosphate reductase TERM 2160 2833300 - 2833264 - R 78 -14.4 -3.03243 | gap 1 ATCCAGCGCGTAATA GCGCG-TGCAACCGACG ATGT CGCCGGCGGCATCGCGC ACCACAAACGGCAAC TERM 2161 2833319 - 2833309 - R 71 -8.2 -3.96327 | overlap 2833310 ATCGCGCACCACAAA CGGC AAC GCCG CACCATTGGCGCAAG argB 2834882 - 2833539 - | acetylglutamate kinase TERM 2162 2834364 - 2834381 + g 72 -12.7 -3.05384 | GATCACCGGGATCGA GCCAGCC TGCA GGCTGGC TTCGATCGGCGCCAG argE 2836022 - 2834922 - | acetylornithine deacetylase TERM 2163 2835617 - 2835603 - G 81 -7.8 -4.58395 | opp_overlap 2835608 GCCACGCGCCAAAAA CGCTGC GAT ACAGCG CGGATCGTTGGCTTC XOO2674 2836471 - 2836028 - | hypothetical protein TERM 2164 2836375 - 2836326 - G 77 -12.2 -3.61517 | ACGCCCTCGCAATAA CCGCCGAAACACAGCG-AGCCGGC GATC GCCCGCTGCACCGTG-TCCAGCGG AATGCCCAGGCACCA TERM 2165 2836691 - 2836715 + r 100 -15.7 -4.25848 | overlap 2836692 ACTGCGGCGCTCCCA CCCCCTCTCCC GGG GGGAGAGGGGC TTTTGCTCAGCGGTT TERM 2166 2836692 - 2836714 + r 93 -19.2 -3.15027 | overlap 2836691 CTGCGGCGCTCCCAC CCCCTCTCCC GGG GGGAGAGGGG CTTTTGCTCAGCGGT argG 2837963 - 2836722 - | argininosuccinate synthase TERM 2167 2838037 - 2838079 + r 71 -14.1 -2.58544 | gap 1, opp_overlap 2838042, overlap 2838036 2838076 CACGAATCCCCAATC ACGAATCCCGGCGGCCCTGG CCGA CCAGGGCCGCCATGAT-CGC CTTCTGCACATGCAG TERM 2168 2838075 - 2838042 - R 95 -20.3 -3.27476 | opp_overlap 2838037 2838036 ATCCCCAATCACGAA TCCCGGCGGCCCTGG CCGA CCAGGGCCGCCATGA TCGCCTTCTGCACAT argF 2839060 - 2838035 - | N-acetylornithine carbamoyltransferase TERM 2169 2839189 - 2839172 - R 100 -12.7 -5.46698 | opp_overlap 2839172 GCCAAAACGAAAAAA CCCAGCC TGTA GGCTGGG TCTTCAACGTCGGAA TERM 2170 2839172 - 2839189 + r 71 -12.7 -3.04144 | opp_overlap 2839172 GCCAAAACGAAAAAA CCCAGCC TGTA GGCTGGG TCTTCAACGTCGGAA XOO2677 2839888 - 2839373 - | hypothetical protein cysS 2840038 - 2841468 + | cysteinyl-tRNA synthetase TERM 2171 2841889 - 2841863 - g 75 -12.2 -3.53012 | opp_overlap 2841878, overlap 2841866 GCGCGGGCGCTCAAA GACCCGCGCGCC AGT GGCGCGCAAACC GCGCCTTCTCGCCCC TERM 2172 2841890 - 2841918 + G 71 -7.4 -4.07568 | gap 1, overlap 2841878 2841914 AGTGGCGCGCAAACC GCGCCT-TCTCGC CCCG GCGGGAGAGGGGC TTTTACCGAACGCCC XOO2679 2841759 - 2842403 + | hypothetical protein tetV 2842400 - 2843650 + | drug:proton antiporter XOO2681 2844779 - 2843718 - | interphotoreceptor retinoid-binding protein TERM 2173 2843979 - 2844028 + g 100 -21.3 -4.37092 | gap 1, opp_overlap 2843971 CTTGAAACCGCGACT CGGGTGCGCGCCGCCGCCACTGGC GTC GCCGACGGCGGCGGCCCGC-CCTG TTTTCTGCAGCGCAT TERM 2174 2844081 - 2844052 - G 75 -7.7 -4.23758 | overlap 2844053 AGCGCATAGGCAAAA TCCCCGGCAGCCG AAAA CGTCTGCGGGGTA GTCAGCAGGTAAAGC TERM 2175 2844908 - 2844870 - R 77 -14.7 -2.82834 | opp_overlap 2844879 2844881, overlap 2844881 CAGCGGAGCAGGAGA CCATTAAAAAACCCCGC GCATG GCGGGGTCTTTCAGTGG GCGAAGCGGACGATC TERM 2176 2844897 - 2844881 - R 100 -10.8 -5.20216 | opp_overlap 2844879 2844881, overlap 2844870 GAGACCATTAAAAAA CCCCGC GCATG GCGGGG TCTTTCAGTGGGCGA TERM 2177 2844881 - 2844897 + r 71 -10.8 -3.40597 | opp_overlap 2844881 2844870, overlap 2844879 GAGACCATTAAAAAA CCCCGC GCATG GCGGGG TCTTTCAGTGGGCGA dksA 2845950 - 2844922 - | DnaK supressor TERM 2178 2845678 - 2845693 + g 78 -10.4 -3.9461 | overlap 2845659 GGCAGCCGGTTTGGC GGCAGC CGGA GCTGCC TTCTTGTTCGCCGCC TERM 2179 2845859 - 2845879 + g 81 -7.6 -4.56775 | gap 1, overlap 2845862 2845863 TTGGCGGCCGGTTTC GA-AGCGGC GGGC GCCGCTGTC TTTTTCGCAACGGGT TERM 2180 2845863 - 2845877 + g 73 -9.2 -3.90048 | overlap 2845862 2845859 CGGCCGGTTTCGAAG CGGCGG GCG CCGCTG TCTTTTTCGCAACGG TERM 2181 2845912 - 2845924 + g 93 -6.2 -5.35222 | GGCGGACTTCTTGGC GGCC TCTAC GGCC TTTTTTGTAGGTTTT TERM 2182 2845977 - 2845994 + H 76 -9.8 -3.89346 | CCTTGGTTCTCCCGG GGCCCG GGAAAG CGGGCC TTTATAACGTACCCC TERM 2183 2846080 - 2846091 + H 72 -7.2 -4.11371 | overlap 2846079 2846090 TCACGCCTGCTCATC GCGC TGCT GCGC TTTTACAAGCTGTTC TERM 2184 2847324 - 2847290 - gH 70 -2.7 -4.63932 | gap 1, overlap 2847297 CACCTGGGAAGAAAA GCAGAAGCCGTATGCG CAGG CGCCTTCGGGC-CTGC CGCTGGTGCAGTACG pyrC 2846319 - 2847668 + | dihydroorotase XOO2684 2847608 - 2848507 + | peptidase eutC 2848932 - 2849324 + | ethanolamine ammonia-lyase light chain XOO2686 2849400 - 2849825 + | transposase XOO2688 2850458 - 2850195 - | hypothetical protein TERM 2185 2850820 - 2850786 - R 86 -13.6 -3.84451 | overlap 2850788 GCGGTCAAATGCAAA GACGCACACGCAATCT GGG AGGCTGCGTGTGCGTG TAGAGACACTCAGCG TERM 2186 2850818 - 2850788 - R 89 -16.2 -3.50832 | overlap 2850786 GGTCAAATGCAAAGA CGCACACGCAATCT GGG AGGCTGCGTGTGCG TGTAGAGACACTCAG XOO2689 2851432 - 2850830 - | general stress protein XOO2690 2851926 - 2851543 - | putative ISXo8 transposase XOO4842 2852063 - 2851782 - | putative ISXo8 transposase XOO2691 2853096 - 2851933 - | putative ISXo8 transposase TERM 2187 2853710 - 2853721 + GH 76 -2.2 -4.8622 | overlap 2853708 GACGAGTTGCAGAGC TGCG AGGC TGCA TTTTTCATTGCCGCC XOO2692 2853011 - 2854087 + | putative transposase XOO2694 2854139 - 2855128 + | putative ISXo8 transposase XOO2695 2855269 - 2855496 + | putative ISXo8 transposase TERM 2188 2856010 - 2855997 - g 79 -6.7 -4.49981 | TACACCATCACAAAA GCCTT GGCC AAGGC CGGACCGATCACTGC TERM 2189 2856221 - 2856185 - g 78 -14.4 -3.24188 | CTACATCAGCATCAA GGCGGGCACCTACACC GGACT GGTGTGCGTGCCCACC AATGCGCCACCACTG XOO2696 2855814 - 2857037 + | putative pectinesterase pglA 2858626 - 2860296 + | polygalacturonase TERM 2190 2860340 - 2860315 - T 93 -20.5 -2.91582 | CAGCTGATTGAGACA CCGCGCTTGCC ACAC GGCAAGCGCGG ATGCCGAGCGCGGTC XOO2700 2861202 - 2860513 - | hypothetical protein TERM 2191 2861141 - 2861126 - G 70 -5.4 -4.37092 | gap 1, overlap 2861127 AGTTGCGGGATAAAA GGCTCGG CAA CCGA-CC ATTCCGGCCAGCGTG cbbZ 2861983 - 2861231 - | phosphoglycolate phosphatase TERM 2192 2861809 - 2861761 - G 70 -13.9 -2.62396 | overlap 2861771 2861774 2861785 CACCTTTGGAGACCA CTGGACGCAACGAGGCCA-ACGC AATCG GCGCACGGCCACG-CGCGTCCAG CATCGCGTTGACCGT ubiG 2862728 - 2862009 - | 3-demethylubiquinone-9 3-methyltransferase XOO2703 2864162 - 2862759 - | N-ethylammeline chlorohydrolase XOO2704 2865105 - 2864116 - | hypothetical protein TERM 2193 2864802 - 2864765 - GR 75 -14.7 -2.78384 | GTCTGTGCCACGACA CGCGCGACCGGCACCGC CTCG GCGGTGCCGCCCGCTCC GCCGGAAGTCGCAAC efP 2865836 - 2865111 - | elongation factor P TERM 2194 2865725 - 2865701 - G 73 -13.6 -2.80074 | overlap 2865698 2865696 TCCTCGATAAGACCA CGACCCGCCA TGCGG TGGCAGGTCG GATTAGAATGGGGCG TERM 2195 2865739 - 2865760 + g 84 -12.9 -3.75517 | opp_overlap 2865734, overlap 2865735 2865740 CGGATTAGAATGGGG CGCCCGCCG CAAC CGGCGGGCA TTGGTTTTGTGACCT TERM 2196 2865740 - 2865759 + g 84 -16.4 -2.84587 | opp_overlap 2865734, overlap 2865739 2865735 GGATTAGAATGGGGC GCCCGCCG CAAC CGGCGGGC ATTGGTTTTGTGACC TERM 2197 2865906 - 2865946 + r 85 -14.8 -3.60296 | gap 2, overlap 2865907 2865937 AGCTGTTGGGCCTGG ATGCGCAGGCGGCGGCGATC AGC GA-CGCTGCCGC-TGCGCAG TTTCCGCTGCGGGTG TERM 2198 2865907 - 2865945 + r 86 -18.3 -2.75963 | gap 2, overlap 2865906 2865937 GCTGTTGGGCCTGGA TGCGCAGGCGGCGGCGATC AGC GA-CGCTGCCGC-TGCGCA GTTTCCGCTGCGGGT TERM 2199 2865937 - 2865970 + r 71 -8.7 -3.86015 | gap 1, overlap 2865907 2865906 GATCAGCGACGCTGC CGCTGCGCAGTTTCCG CTG CGGGTGCCGCGC-GCG TTTGTGGCGCGGATG XOO2708 2869144 - 2867027 - | GGDEF family protein XOO2709 2870070 - 2869141 - | phosphate-binding protein XOO2710 2871036 - 2870122 - | tRNA/rRNA methyltransferase suhB 2870972 - 2871838 + | extragenic supressor protein SuhB TERM 2200 2871925 - 2871896 - TR 75 -13.6 -3.03443 | opp_overlap 2871901, overlap 2871900 2871901 2871914 GCAGGACCACACAGA CAAAGGGCCGGG ATCAAA CCCGGCCTTTTG CGTTGCATAACGCTC TERM 2201 2871921 - 2871900 - TR 76 -8.6 -4.18367 | opp_overlap 2871901, overlap 2871896 2871901 2871914 GACCACACAGACAAA GGGCCGGG ATCAAA CCCGGCCT TTTGCGTTGCATAAC TERM 2202 2871901 - 2871920 + Tr 91 -12.1 -4.28774 | opp_overlap 2871900 2871896 2871901 2871914 ACCACACAGACAAAG GGCCGGG ATCAAA CCCGGCC TTTTGCGTTGCATAA TERM 2203 2872065 - 2872040 - TR 100 -19.1 -4.25056 | opp_overlap 2872040 2872043 GATCGCAGCAACAAA GAAGGCCGGGA TCGC TCCCGGCCTTC TTGCGTTACCGCACT TERM 2204 2872040 - 2872065 + Tr 93 -19.1 -3.17194 | opp_overlap 2872040, overlap 2872043 GATCGCAGCAACAAA GAAGGCCGGGA TCGC TCCCGGCCTTC TTGCGTTACCGCACT TERM 2205 2872043 - 2872062 + Tr 88 -15 -3.73068 | opp_overlap 2872040, overlap 2872040 CGCAGCAACAAAGAA GGCCGGGA TCGC TCCCGGCC TTCTTGCGTTACCGC sodM 2872702 - 2872091 - | superoxidase dismutase XOO2713 2872957 - 2873397 + | ribonuclease XOO2714 2873394 - 2873819 + | hypothetical protein TERM 2206 2874192 - 2874141 - T 72 -7.3 -4.11304 | gap 2, overlap 2874138 GGAATCGACAAACAA CGGATCGCTGCCGACGGATCGCTGC GCAC GCA-CG-TCCGTATGCATCCATCCG CCATGGCTCGCAATC uup 2876163 - 2874268 - | ABC transporter ATP-binding protein TERM 2207 2874971 - 2874953 - G 78 -8 -4.38712 | opp_overlap 2874954, overlap 2874954 TTGATCTCCAGAAAA TCGCGGCC TTC GGCCACGT TTTCGATCGCGCTCC TERM 2208 2874954 - 2874970 + g 76 -9.3 -4.18494 | opp_overlap 2874954 2874953 TGATCTCCAGAAAAT CGCGGCC TTC GGCCACG TTTTCGATCGCGCTC TERM 2209 2876084 - 2876099 + g 81 -3.2 -5.00616 | overlap 2876085 ATACGCTCGCACGGC TCGATC GTGA GGTCGG TTTTTTCCAGCAACA dbpA 2876253 - 2877629 + | ATP-dependent RNA helicase DbpA TERM 2210 2877662 - 2877633 - T 88 -17.2 -3.04501 | gap 1, opp_overlap 2877634 2877636, overlap 2877623 2877636 AGCAAGCTCTGAATA CGACGCGGCCGGC GTCAT GCCGGCCGCGT-G TTTTCTCAGTCACGG TERM 2211 2877634 - 2877662 + T 100 -18.1 -4.42386 | opp_overlap 2877633 2877623 2877636, overlap 2877636 GCAAGCTCTGAATAC GACGCGGCCGGCG TCA TGCCGGCCGCGTG TTTTCTCAGTCACGG TERM 2212 2877660 - 2877636 - T 90 -20 -2.74371 | opp_overlap 2877636 2877634, overlap 2877633 2877623 AAGCTCTGAATACGA CGCGGCCGGC GTCAT GCCGGCCGCG TGTTTTCTCAGTCAC TERM 2213 2877636 - 2877660 + T 100 -20.7 -3.82117 | opp_overlap 2877633 2877623 2877636, overlap 2877634 AAGCTCTGAATACGA CGCGGCCGGCG TCA TGCCGGCCGCG TGTTTTCTCAGTCAC TERM 2214 2877786 - 2877743 - T 93 -7.2 -4.96773 | overlap 2877745 CGAATCAAAAAGAAA GCGTCGCCAGTAGCGGCACG TCAT CGGCCCATTTCTGGCGACCC TGTAGCGCCAGCAAC apt 2878292 - 2877732 - | adenine phosphoribosyltransferase TERM 2215 2877922 - 2877908 - G 74 -12.8 -3.20227 | opp_overlap 2877917 2877918, overlap 2877906 CGTCAACGATCAATA CGCGCG CGC CGCGCG GCAACGCGCCTTCGT XOO2718 2880063 - 2878390 - | hypothetical protein XOO2719 2880131 - 2881105 + | carboxylesterase gstA 2882052 - 2881306 - | glutathione S-transferase TERM 2216 2882145 - 2882122 - R 100 -16 -5.4833 | opp_overlap 2882122 TCAGGCAATAAAAAA CGCCGATCGC TTGC GCGACCGGCG TTTTTGGCAACCTGA TERM 2217 2882122 - 2882145 + r 100 -13.8 -4.57569 | opp_overlap 2882122 TCAGGCAATAAAAAA CGCCGATCGC TTGC GCGACCGGCG TTTTTGGCAACCTGA cspA 2882540 - 2882175 - | major cold shock protein XOO2722 2882546 - 2883139 + | hypothetical protein XOO2723 2883210 - 2883758 + | hypothetical protein TERM 2218 2884594 - 2884567 - g 100 -12 -4.63218 | gap 1, overlap 2884570 GCTGCGCGAACAAAA GCAGCAGCGCGGT GCC ACCGAGCTGC-GC AACGTGTTGGCCGAT TERM 2219 2884592 - 2884570 - g 74 -13.4 -3.25538 | overlap 2884567 GCGCGAACAAAAGCA GCAGCGCGGT GCC ACCGAGCTGC GCAACGTGTTGGCCG XOO2724 2883755 - 2884936 + | hypothetical protein TERM 2220 2885190 - 2885169 - g 70 -2.2 -4.70659 | CCGCACATGCAAAAA GGCAAAGA TCTCAC CCTCCGCC TGATGATCGTCGACG TERM 2221 2885837 - 2885817 - g 70 -7.5 -3.96148 | overlap 2885818 CCGGCGCAGTACAAA CTCGACGCG CGC CGCGTGGAA GGCGACACCTTCCCG XOO2725 2884914 - 2887229 + | hypothetical protein TERM 2222 2887298 - 2887270 - T 91 -16.9 -3.2963 | opp_overlap 2887270 2887277, overlap 2887277 ACTATCGCGCGACAA CAAAAAACCCGCA TTC CGCGGGTTTTTTG TTGTCTAAAAGCGAC TERM 2223 2887270 - 2887298 + T 89 -16.2 -3.48276 | opp_overlap 2887270 2887277, overlap 2887277 ACTATCGCGCGACAA CAAAAAACCCGC ATTCC GCGGGTTTTTTG TTGTCTAAAAGCGAC TERM 2224 2887291 - 2887277 - T 100 -9.2 -5.55769 | opp_overlap 2887270 2887277, overlap 2887270 CGCGACAACAAAAAA CCCGCA TTC CGCGGG TTTTTTGTTGTCTAA TERM 2225 2887277 - 2887291 + T 100 -8.5 -5.60689 | opp_overlap 2887277 2887270, overlap 2887270 CGCGACAACAAAAAA CCCGC ATTCC GCGGG TTTTTTGTTGTCTAA htpX 2888207 - 2887329 - | heat shock protein HtpX TERM 2226 2888903 - 2888939 + G 76 -13.6 -3.09015 | CCACTCCGCGCCAGA TGCTGCTGCAGCGCGC ACTGG GCGTGCCGCAGCCGCG TTACCTGCATCTGCC TERM 2227 2889110 - 2889128 + G 71 -4.5 -4.57341 | overlap 2889070 2889121 CGGTCACGACCCTGC TGCAGCA GGCCG TGCGGCA TTTTTCGCCGCAGTT XOO2727 2888305 - 2889204 + | aminoacyl-tRNA synthetase:glutamyl-like protein phbB 2889274 - 2890032 + | acetoacetyl-CoA reductase TERM 2228 2890048 - 2890091 + F 83 -6.7 -4.84527 | overlap 2890037 CGTTTGCTGCAACTT TGCGGTGCAGCATGGATTT GCAACG AGAACCATGCTGCGCAACA TTTTTAATGTGTCCG XOO2729 2890192 - 2890767 + | hypothetical protein TERM 2229 2890847 - 2890878 + T 95 -11.4 -4.63932 | GCCGATTCCGAGCAC CGGCCGCGCCCGCC TGGC GGTGAGCGCAGTCG TTTTGTTAGCCGCTC XOO2730 2891927 - 2890941 - | hypothetical protein XOO2731 2892914 - 2891946 - | hypothetical protein mutL 2894770 - 2892893 - | DNA mismatch repair protein TERM 2230 2893320 - 2893349 + g 79 -6.5 -4.57569 | gap 1, opp_overlap 2893317, overlap 2893312 GGCACCAGCAATGGC TGCGCATG-CAG GCCGATG CTGTCGTGCGCA TTTTTAAGCCGCTCA amiC 2896641 - 2894908 - | N-acetylmuramoyl-L-alanine amidase TERM 2231 2895300 - 2895322 + g 89 -10.5 -4.48987 | TCTGCTGCAAGCGCA CGCCACCGA CCAGA TCGGCGGCG TTTTCCTTGTCGGCC TERM 2232 2896583 - 2896563 - G 100 -12.5 -4.7497 | CCCACCCAGCAAAAA CCGCCAGGC TCA GGCTGGCGG TCAGGGCGGAAACAC XOO2734 2897194 - 2896694 - | hypothetical protein TERM 2233 2896772 - 2896721 - G 91 -7.1 -5.02074 | gap 1 TGAGGCGGCAAAAAA GGCCTGCAACTG-GGGCTGCTGCG ACAGA CGCTCCAGCCAGCCGTTGCCGACC GCGCTGCGGCCCAGC XOO2735 2898678 - 2897191 - | hypothetical protein yjeS 2899014 - 2899769 + | iron-sulfur cluster-binding protein TERM 2234 2900258 - 2900224 - gT 86 -13.6 -3.71487 | gap 1, opp_overlap 2900227, overlap 2900185 2900225 GACCATATGGAAGAA GCCGGCGAAGGCGCG TTGCGT CGCGCCTTCGACG-C ACTGCGTGCACGCCT TERM 2235 2900258 - 2900225 - gT 73 -13.8 -2.8241 | opp_overlap 2900227, overlap 2900185 2900224 ACCATATGGAAGAAG CCGGCGAAGGCGCG TTGCGT CGCGCCTTCGACGC ACTGCGTGCACGCCT TERM 2236 2900357 - 2900400 + GT 81 -13.1 -3.62096 | gap 1, overlap 2900350 TCATCACTTCGCCCA GCGGCGCGGCGGTGCGC-GA TGTGC TCAGCGTACTGGCGCGGCGC TTTCCGCTACTCGAA TERM 2237 2900843 - 2900794 - gT 72 -12.8 -3.07994 | gap 2, opp_overlap 2900802 2900806 GGCAATGCCATGCAA CGCGCCGACCGGCT-TGCGC-TGC GCCT GCGTGCGCATAGCCCGCAGGCGCG CCTGCAACTGCTTCA xseA 2899738 - 2901252 + | exodeoxyribonuclease VII large subunit acvB 2902810 - 2901548 - | virulence protein TERM 2238 2901697 - 2901709 + g 90 -5.5 -5.1356 | overlap 2901659 2901656 GCGCGCGCAGTTCCG GGCAC AGC GTGTC TTTTTCTTCGTCGCC XOO2739 2903497 - 2903027 - | putative transposase XOO2740 2903732 - 2903469 - | putative transposase TERM 2239 2903924 - 2903947 + r 74 -9.6 -3.85698 | AACGACGCCTTGCTC GTCAAGCATG CGCC CATGCCTGAC TTTGTCGGAGCGAAC XOO2741 2905707 - 2904091 - | hypothetical protein TERM 2240 2907074 - 2907056 - g 74 -10.2 -3.71848 | overlap 2907036 2907058 TTGCCCGATGAAGAA CATGCGCC ATT GGCGCAAG CCGCTACCGACGGCA TERM 2241 2907072 - 2907058 - g 72 -11.4 -3.44284 | overlap 2907036 2907056 GCCCGATGAAGAACA TGCGCC ATT GGCGCA AGCCGCTACCGACGG rnD 2906039 - 2907289 + | ribonuclease D TERM 2242 2907314 - 2907330 + F 84 -4.4 -5.13741 | gap 1, opp_overlap 2907314, overlap 2907316 CGGTTCGACACGTAA GC-CGCA GCGA TGCGTGC TTTTTCTTGGATTGC TERM 2243 2907550 - 2907506 - f 72 -12.1 -3.30124 | gap 1 TTGCAGCTTGGACAA GTCCGACCAGGC-CAGCGGC AACGCA ACCGGCGCGCCTGGTCGGCC ACGCAGTGAATAGGA xrvA 2908382 - 2908783 + | virulence regulator TERM 2244 2908822 - 2908852 + T 72 -11.8 -3.36327 | overlap 2908792 2908817 CGCGTTGCACGGTCG GCTGCGTCCTTCGC TTG GCGAACCGCGCAGC TTGTGGGTAGAATCC TERM 2245 2908962 - 2908984 + T 91 -5.4 -5.33405 | opp_overlap 2908958 2908962 CACCAATAGAATCAA GGGCTTAGCC GAT GACCAGGCCC TTTTTCTTTGGTAGA XOO2745 2909424 - 2909290 - | hypothetical protein XOO2746 2910245 - 2909970 - | hypothetical protein TERM 2246 2910348 - 2910320 - R 72 -12.4 -3.34088 | gap 1 AGCACCAGACAGTAA GCC-TGCAGGGGC GACA GCCCCTGCTCGGC CAAGACCGCTGCTGC TERM 2247 2910840 - 2910850 + r 79 -8.2 -4.26076 | overlap 2910839 GCGTGTCCCGGTTCA GCGC CTC GCGC TTTTCCTCGCGCTCG tnpX1 2913632 - 2912430 - | IS1113 transposase TERM 2248 2912571 - 2912547 - G 79 -5.7 -4.59773 | opp_overlap 2912550 GCGCACGGCCAAAAA CAACGATTTGA GCG CCGAATCGTCG TTGGGGAAAATACGC TERM 2249 2913339 - 2913356 + g 72 -8.4 -4.1552 | ATTCTCCTCCATCCC CGCCAG CCGCAC CTGGCG TTTCTTCACCAACTG XOO2748 2913737 - 2913976 + | putative ISXo8 transposase TERM 2250 2914160 - 2914175 + G 74 -4.6 -4.55697 | GGCGTTGGAGATCTC GCGCTG GCCA CAGGGC TTTGTTTGTCCGCGT TERM 2251 2914893 - 2914909 + G 74 -10.1 -3.70902 | opp_overlap 2914888, overlap 2914894 CTGGCAGAGACGATG TGGCGGT TCA ACCGCCG TTTCGATCTGACCCG XOO2749 2914008 - 2915024 + | transposase XOO2750 2915174 - 2915731 + | 3-methyladenine DNA glycosylase TERM 2252 2916876 - 2916858 - f 93 -8.1 -5.08601 | gap 1, overlap 2916860 CCATTCGAACAAAAA GC-GCGCG TAAT CGCGCTGC GACACCGGCTCGATC XOO2756 2919610 - 2919933 + | hypothetical protein XOO2757 2920473 - 2920144 - | hypothetical protein sspB 2920946 - 2920506 - | ClpXP protease specificity-enhancing factor sspA 2921660 - 2921025 - | stringent starvation protein A TERM 2253 2921273 - 2921293 + g 82 -6.8 -4.63486 | gap 1, overlap 2921274 2921276 GTTCTTTCAGGCGCT TGC-GGCCG GCCT CGGCCTGCG TTTTATTGCCCAGCT petC 2922811 - 2922053 - | ubiquinol cytochrome C oxidoreductase, cytochrome C1 subunit petB 2924063 - 2922804 - | ubiquinol cytochrome C oxidoreductase, cytochrome B subunit petA 2924707 - 2924063 - | ubiquinol cytochrome C oxidoreductase, iron-sulfur subunit yjbJ 2926223 - 2925237 - | soluble lytic murein transglycosylase dnrO 2927341 - 2926373 - | repressor TERM 2254 2926490 - 2926439 - G 81 -13.7 -3.48593 | gap 3, opp_overlap 2926459 CAGTTGGGCACACAA CGCGTTCAGCGCCTGGGTCA-GCGCG GCA CGCGCTTGGTCC-GGCGC-GATCGCG TCGAACGGCAGGTCC TERM 2255 2926840 - 2926866 + g 100 -22.4 -2.70932 | GCCGCCCATCGTTCA CCCGCAGTGTCG GCT CGACACTGCGGG TGATTGCCGCCCCAG TERM 2256 2927125 - 2927067 - G 93 -19 -2.78715 | gap 4, opp_overlap 2927120 AACCTGGCCATCACA CGTGCG-GCCGCCGCGCCCATGCCGCGC ACCGCCG GCGCGGC--G-GCGCGGCGGCGCGCAGG GCGACTGCCACGGTC TERM 2257 2927181 - 2927165 - G 74 -11.5 -3.61398 | TCTTCGTTCGAATAA CAGCGGC AAC GCCGCCG CGCCCTGCCCCAGGC TERM 2258 2927415 - 2927393 - H 79 -16.4 -2.52676 | CATGCCGCCAACGTA TTGCGGACAG AAA CTGTCCGCAA GCGCCCCGTAGGATC gstA 2927574 - 2927924 + | glutathione S-transferase XOO2766 2928159 - 2929613 + | hypothetical protein XOO2767 2930037 - 2931023 + | ATP-binding protein XOO2768 2931435 - 2932097 + | hypothetical protein XOO2769 2932152 - 2932637 + | putative metalloprotease XOO2770 2932634 - 2933155 + | hypothetical protein ybeX 2933232 - 2934128 + | polar amino acid transporter XOO2772 2934125 - 2935405 + | hypothetical protein corA 2935421 - 2936422 + | magnesium and cobalt transport protein gabD 2937974 - 2936574 - | succinate-semialdehyde dehydrogenase TERM 2259 2938286 - 2938300 + r 74 -9.2 -3.87815 | CTGCGTGGCCCGCGG CCCGGT CCG GCCGGG TTTGTCACCGTGCAC potI 2939589 - 2938759 - | putrescine transport protein; permease TERM 2260 2938788 - 2938803 + g 89 -4.6 -5.14563 | overlap 2938776 2938790 GTTGCGCCAGTTGCG CATCGC GCAG GCGACG TTTTTTGCTGCGCGC potG 2941192 - 2939909 - | ATP-binding component of putrescine transport system oprN 2942813 - 2941302 - | outer membrane protein OprN precursor rmrB 2944392 - 2942800 - | transport protein TERM 2261 2943299 - 2943269 - G 70 -4.7 -4.36914 | gap 2, overlap 2943270 2943271 TGCCCGGCGACAAAA TG-CG-TGCCCACGG TGT CCGCGGTCAGCGTCA GATTGACGAAACAGG rmrA 2945630 - 2944389 - | transport protein TERM 2262 2945809 - 2945841 + H 70 -13.3 -2.87132 | opp_overlap 2945798, overlap 2945811 GAGAGTGCGCCGGAC GAGCGCCTCGCCACG CAG CGCAGCCAGGCGCTC TATCTCGCACGGCAG TERM 2263 2945996 - 2946008 + H 71 -4.8 -4.4773 | TGCGGTTTTGGCGTG CTGG AACTG CCAG TTTTCGTTACTCTAC XOO2781 2946035 - 2947669 + | putative ISXo8 transposase glnA 2949107 - 2947722 - | glutamine synthetase TERM 2264 2949247 - 2949234 - R 78 -5.2 -4.72986 | overlap 2949236 CACCGCCAGCAAAAA GCCC GGGCCA GGGC CGCGAAAGGCTTCGA guaA 2949877 - 2949263 - | glutamine amidotransferase glnA 2950016 - 2951395 + | glutamine synthase TERM 2265 2951549 - 2951585 + G 71 -12.2 -3.19642 | gap 1 TCGGCGGTGGCTATA CCGGCCT-GACCGCCGC GCTG GCGCTGGCCGAGGCCGG TTACTCCGTCATCGT ordL 2951392 - 2952711 + | oxidoreductase rrpX 2952794 - 2954092 + | transcriptional regulator TERM 2266 2954212 - 2954233 + T 83 -7.3 -4.54727 | overlap 2954195 2954215 GCCTATCGCATTGGG CAATGCCAT TGCG ATGGCACTG TTTTGGTTTGGCAGG TERM 2267 2954285 - 2954336 + T 70 -11.7 -3.14132 | gap 3, opp_overlap 2954271 2954286 ATCTGCACCGAGGCA ACGCGGGC-AT-G-ATCCCGGCGCTG CCA TAGCGCCGGGATGCGATCGCCCCCGC TTGATCCCGCGCCAA TERM 2268 2954335 - 2954286 - T 78 -14.5 -3.07816 | gap 3, opp_overlap 2954285, overlap 2954271 TCTGCACCGAGGCAA CGCGGGC-AT-G-ATCCCGGCGCT GCCAT AGCGCCGGGATGCGATCGCCCCCG CTTGATCCCGCGCCA yhjE 2955935 - 2954400 - | metabolite transport protein TERM 2269 2954683 - 2954649 - G 83 -2.7 -5.1356 | gap 1, opp_overlap 2954672, overlap 2954650 2954651 CCCCATGAAGAAAAA TCCCAGCGACAGGAAC GCCA GCACCTGTAGC-GGGT GGTTAGCCTGAAACA TERM 2270 2954763 - 2954721 - G 71 -10.5 -3.61371 | overlap 2954726 AAATGCCAGGCCAAA GGCAACGATGGCAATGCTG GCCAG CAGCATCGCCAGCGGCGCG CCATGGCGGTCGCCA TERM 2271 2954758 - 2954726 - G 78 -14.2 -3.28497 | overlap 2954721 CCAGGCCAAAGGCAA CGATGGCAATGCTG GCCAG CAGCATCGCCAGCG GCGCGCCATGGCGGT XOO2789 2958602 - 2956254 - | formate dehydrogenase a chain fdsC 2959444 - 2958599 - | formate dehydrogenase accessory protein TERM 2272 2958724 - 2958775 + g 71 -9.2 -3.75461 | opp_overlap 2958754, overlap 2958728 2958772 CCAGGCTGATCGCCA GCGCGGTGGGCGCGGAGATCGCTG CAAG CAGCGGTATCCGGGCCTGCGTGGC TTTCATGGCCATTTC TERM 2273 2959241 - 2959190 - G 88 -14.4 -3.85817 | gap 1, opp_overlap 2959194 2959198 AGCGCCTTCCAGAAA CGTCTCCACCG-CGATCACGCGCAG GTC CTGCGCGTGATCGACGATGCCTTCG CTCAACGAGAACCCG TERM 2274 2959194 - 2959237 + g 80 -14.6 -3.05384 | gap 1, opp_overlap 2959190, overlap 2959198 CCTTCCAGAAACGTC TCCACCG-CGATCACGCGCAG GTC CTGCGCGTGATCGACGATGCC TTCGCTCAACGAGAA TERM 2275 2959198 - 2959233 + g 86 -18.4 -2.54896 | gap 1, opp_overlap 2959190, overlap 2959194 CCAGAAACGTCTCCA CCG-CGATCACGCGCAG GTC CTGCGCGTGATCGACGA TGCCTTCGCTCAACG yhjX 2961160 - 2959451 - | integral membrane transporter XOO2792 2961526 - 2962563 + | putative transposase XOO2793 2962806 - 2964158 + | beta alanine--pyruvate transaminase XOO2794 2967356 - 2964219 - | hypothetical protein TERM 2276 2964639 - 2964607 - G 72 -12.8 -3.14693 | gap 1, overlap 2964603 2964605 GTGATCACGAACACA TCAGGCAGACGC-CG ATCG CACGCGCCTGCCTGA CTGACGTATAAGTCC TERM 2277 2965341 - 2965320 - G 78 -4.3 -4.75372 | gap 1, overlap 2965321 AGCATTGAGGAAAAA CGCCTCGTGC AAG GC-CATGGCG GCAGCGAAAAGTGCA XOO2795 2967523 - 2968377 + | hypothetical protein XOO2796 2968548 - 2969852 + | hypothetical protein TERM 2278 2971329 - 2971357 + G 81 -2.9 -5.00884 | opp_overlap 2971330, overlap 2971330 TCGCCCATTATCGAA AGCGAAGGCACAC TCA GCGGGCATTCGCA TTTTTTCCGCGACAT TERM 2279 2971905 - 2971878 - g 74 -2.6 -4.73388 | overlap 2971880 AAGCTGCACGAAAAA CAGCTGCGTC TGGCGATG GACGCGGCCA AGAGCGCCAATCAGT TERM 2280 2973428 - 2973439 + G 73 -5.8 -4.36914 | CGAAGAATTGGTCAC TGCC ATTC GGCA TTTTCTGCAGCCGGG TERM 2281 2973688 - 2973660 - g 80 -13.9 -3.33696 | CTGCGCCGCAATGAA TTGCCGGCCATCG GTG CGATGGCCCACAA GTTGCGCGGCGCGGC XOO2797 2969880 - 2974088 + | two-component system sensor protein XOO2798 2974122 - 2975108 + | two-component system regulatory protein TERM 2282 2975275 - 2975244 - f 95 -11.4 -4.63932 | GAGCGGCTAACAAAA CGACGGCGCTCACC GCCA GGCGGGCGCGGCCG GTGCTCGGAAGCGGC TERM 2283 2975966 - 2975977 + G 70 -5.8 -4.25104 | TCATCTCGCTGATCC TGGC CTGC GCCA TTTTCATGGAGCAGA TERM 2284 2976375 - 2976387 + G 95 -10.5 -4.83269 | overlap 2976373 CCCGATGCTCGGCCC GCCGC TGG GCGGC TTTTTCGTCTCGTAT yieO 2975806 - 2977320 + | drug resistance translocase TERM 2285 2978610 - 2978584 - g 71 -7.3 -4.18494 | gap 1, overlap 2978585 TACTTGGATTCAAAA CGCCCCTCGAAG TCTT CTCCGAGGAG-G TCCTCAACAGCGTTG XOO2800 2977671 - 2978639 + | transposase TERM 2286 2980012 - 2980023 + G 76 -2.2 -4.8622 | overlap 2980010 GACGAGTTGCAGAGC TGCG AGGC TGCA TTTTTCATTGCCGCC XOO2801 2979313 - 2980281 + | putative transposase TERM 2287 2980452 - 2980468 + T 82 -11.5 -4.07687 | opp_overlap 2980452 TTGCACCGCAAAAAA CGCCGCC CGA GGTGGCG TTTTCAAGACAACGT TERM 2288 2980468 - 2980452 - T 100 -9.3 -5.0538 | opp_overlap 2980452 TTGCACCGCAAAAAA CGCCGCC CGA GGTGGCG TTTTCAAGACAACGT TERM 2289 2980521 - 2980490 - T 83 -15.2 -3.19921 | opp_overlap 2980483, overlap 2980481 2980491 AGACAACGTGACCAA CTGCGGTGACGAAG CTAA CTTCGCCACCGCAT TGCCATTCTGCTTAC TERM 2290 2980520 - 2980491 - T 87 -18.7 -2.51471 | opp_overlap 2980483, overlap 2980490 2980481 GACAACGTGACCAAC TGCGGTGACGAAG CTAA CTTCGCCACCGCA TTGCCATTCTGCTTA XOO2802 2985557 - 2980533 - | hypothetical protein TERM 2291 2982678 - 2982705 + g 70 -14.1 -2.55216 | overlap 2982661 2982677 2982675 2982700 GTGACGCACCACCTG CGGCGGCGGCA CGATCT TGCCGCCGACG ATGTTGTCGGTGATA TERM 2292 2986030 - 2986008 - g 80 -9 -4.4078 | CGGCTGCAAGGAAAA CCTGCTGCGC GAT GTGCTGCAGG ATCACATGCACCTGG XOO2803 2985835 - 2986494 + | TetR/AcrR family transcriptional regulator TERM 2293 2987686 - 2987636 - g 74 -10.9 -3.65046 | gap 1, overlap 2987646 2987647 GTGGGATCCGAACAA GCCGGCACAAGGCGGCCAGCCCGG CGCA CCGGGCGCGGCGCCTGCCGC-GGC CCAGAGTGGCGATGC TERM 2294 2987677 - 2987646 - g 77 -12.8 -3.32066 | overlap 2987636 2987647 AACAAGCCGGCACAA GGCGGCCAGCCCGG CGCA CCGGGCGCGGCGCC TGCCGCGGCCCAGAG acrA 2986509 - 2987813 + | multidrug resistance protein acrB 2987826 - 2990996 + | multidrug efflux transporter TERM 2295 2991098 - 2991073 - f 93 -17.7 -3.36878 | opp_overlap 2991073, overlap 2991054 CTGAGTCACCGAGAA TCCGATGCCAG TCCT CTGGCATCGGA TTTTTTGTCTCCATC TERM 2296 2991073 - 2991098 + F 100 -17.7 -5.38047 | opp_overlap 2991054 2991073 CTGAGTCACCGAGAA TCCGATGCCAG TCCT CTGGCATCGGA TTTTTTGTCTCCATC XOO2806 2991186 - 2991971 + | transposase and inactivated derivative XOO2807 2992979 - 2991972 - | transposase TERM 2297 2992103 - 2992087 - G 74 -10.1 -3.70902 | opp_overlap 2992082, overlap 2992088 CGGGTCAGATCGAAA CGGCGGT TGA ACCGCCA CATCGTCTCTGCCAG TERM 2298 2992827 - 2992812 - G 74 -4.6 -4.55697 | ATGCGGACAAACAAA GCCCTG TGGC CAGCGC GAGATCTCCAACGCC TERM 2299 2993062 - 2993031 - H 75 -4.4 -4.70879 | overlap 2993022 TGGAAAGGTCAAAAA GATACTGACCTGCC TGCC AGCAGATCGCTATC CAGCCAACACCGTTG TERM 2300 2993178 - 2993148 - g 70 -6 -4.28994 | overlap 2993149 CACGATGCAGCAAAA CGCGCTCACCCTGC GCA GCAAGAAGATCGCA CTGGTGTATCAGGAC XOO2808 2993083 - 2993493 + | transposase XOO2809 2994609 - 2993635 - | LacI family transcription regulator fruB 2994740 - 2997307 + | multiphosphoryl transfer protein TERM 2301 2997791 - 2997822 + G 80 -15.2 -3.14344 | gap 1 CCAGTGGCACCGGTG CGCGCGTGCTGCTGG ACA CCAGCGGCATGC-CG TTGGTGACGGCGCTC TERM 2302 2997990 - 2998006 + G 76 -13.7 -3.13403 | overlap 2997988 2998003 GGTGGTCATTTCGAT GGGCACC GAC GGTGCCC TGTTCGTGCAGCGCG TERM 2303 2998224 - 2998184 - g 75 -11.9 -3.53012 | opp_overlap 2998223 TGTGCCGGCTGGAAA GCGGCG-ACGCGCGTCGGA TGACG CCCGAGG-GCGTGCGCCGC GCCGCAATCGACGTC fruK 2997304 - 2998260 + | 1-phosphofructokinase (fructose 1-phosphate kinase) fruA 2998419 - 3000161 + | PTS system, fructose-specific IIBC component rpfN 3000276 - 3001616 + | regulator of pathogenicity factors TERM 2304 3001649 - 3001628 - f 74 -12.3 -3.49475 | gap 1, opp_overlap 3001630 GTGACCCGTAGAGAA GC-TGCGCGC GTT GCGCGCATGC TTGGCGGGCACCACT TERM 2305 3001630 - 3001646 + F 72 -13.7 -2.70932 | opp_overlap 3001628 GACCCGTAGAGAAGC TGCGCGC GTT GCGCGCA TGCTTGGCGGGCACC TERM 2306 3001684 - 3001712 + F 71 -12.6 -3.06915 | gap 1 GAAGTGAGTGGCGGG TGCGTTGCATCTG ACTG CAG-TGCAACGCA TTGCGTCGACTCGGT TERM 2307 3002982 - 3002993 + G 76 -2.2 -4.8622 | overlap 3002980 GACGAGTTGCAGAGC TGCG AGGC TGCA TTTTTCATTGCCGCC XOO2814 3002283 - 3003251 + | putative transposase XOO2815 3009596 - 3008910 - | hypothetical protein XOO2816 3010456 - 3009527 - | hypothetical protein TERM 2308 3009700 - 3009690 - GR 80 -4.6 -4.82901 | CGGTGTCGATAAAAA CCGG GGC CCAG ATGCACGGCCTGCCA TERM 2309 3009824 - 3009794 - GR 82 -11 -4.07568 | GGCGGCGGCCGAAAA CTGCGCCGGGGCGA TGT CCATCCCCGCGCAG CGGGCACGTGCCCAG XOO2817 3011526 - 3010465 - | hypothetical protein XOO2818 3013734 - 3012514 - | hypothetical protein XOO2819 3013484 - 3013705 + | ISxac3 transposase XOO2821 3015183 - 3014767 - | hypothetical protein XOO2822 3015626 - 3015180 - | hypothetical protein TERM 2310 3015497 - 3015479 - G 86 -13.8 -3.77953 | overlap 3015449 GGAACAACCCAAGAA CCGCCGCC AAC GGCGACGG GATGTCGGGAGGTTC TERM 2311 3015644 - 3015622 - G 93 -3.4 -5.28176 | opp_overlap 3015640, overlap 3015623 TGCAGGCACAAAAAA CCCACC GGTTTGACGGA GGTGGG TACCGCTCTTAGAGG XOO2823 3015918 - 3017141 + | ISxac1 transposase XOO2824 3017229 - 3017864 + | hypothetical protein TERM 2312 3017958 - 3017922 - T 80 -16.7 -2.61548 | overlap 3017919 3017918 GCTGAGCAGAATGTA TTGCTCCTGAGCCCTTA TTC CAAGAGCTCAGGAGCAC CGATCTAAAGGCGGA TERM 2313 3018614 - 3018595 - T 71 -9.2 -3.6806 | AGACACTGAGGGAAA CCGTCTCG GGTC CGCGACGG CCTCCGCTAAGGAAG XOO2825 3019718 - 3018750 - | putative transposase TERM 2314 3019019 - 3019008 - G 76 -2.2 -4.8622 | overlap 3019009 GGCGGCAATGAAAAA TGCA GCCT CGCA GCTCTGCAACTCGTC cirA 3022744 - 3019781 - | TonB-dependent receptor TERM 2315 3023566 - 3023595 + H 76 -10 -3.95584 | gap 1, opp_overlap 3023561 GCCCATCAAAGCATC CGCCAGCTGCGCC CCTGC GGCGCAG-TGCCG TTTGCTTGCTCGGCA XOO2827 3024417 - 3026384 + | Outer membrane receptor proteins, mostly Fe transport TERM 2316 3027222 - 3027196 - g 72 -7.2 -4.28774 | GCACTGAAGGCAAAA CTCGTGCAGACC TTT GGTTCGCAGGAG GCATTCCAGACCAAG sodM 3026743 - 3027516 + | superoxidase dismutase XOO2829 3027668 - 3028060 + | TonB-dependent siderophore receptor, putative TERM 2317 3028951 - 3028918 - f 70 -10.3 -3.54408 | gap 1, overlap 3028914 CGCCATCCAAACGAA CCGTCAAGTCGCCGGC GTG GCCGGC-ACCTGAAAG ACCCACCTAACAGAA TERM 2318 3029567 - 3029549 - g 74 -10.2 -3.71848 | overlap 3029546 GGCGGTGATGAAGAA CCTGGCCG ACC CGGCCATG CTCGGCCACGGCATC motC 3029037 - 3029777 + | flagellar motor protein TERM 2319 3029936 - 3029951 + G 74 -10.4 -3.77196 | opp_overlap 3029948 CAAGGTCATGGCGCA GGCGCT CACA AGCGCC TTTGGTGGCTCGTCC motB 3029784 - 3030644 + | flagellar motor protein MotD parA 3030760 - 3031542 + | chromosome partioning protein TERM 2320 3031914 - 3031882 - g 72 -11.2 -3.53091 | ATTTCCTCGCCGAAA TGGATGCGGACCCG GCCTT CGGTACCGCACCCA CGGCAGTCGACCTGC cheW 3031539 - 3032561 + | chemotaxis protein XOO2834 3032662 - 3032970 + | hypothetical protein cheY 3032967 - 3033332 + | chemotaxis response regulator TERM 2321 3034614 - 3034588 - g 75 -12.2 -3.5393 | ACCATGGTCTGGAAA TGCCCGACGCGC GCC GCGCCTCCGGCA AGGACGAGACCGGCA cheA 3033366 - 3035375 + | chemotaxis protein TERM 2322 3036938 - 3036912 - g 71 -7.3 -4.18494 | gap 1, overlap 3036913 TACTTGGATTCAAAA CGCCCCTCGAAG TCTT CTCCGAGGAG-G TCCTCAACAGCGTTG XOO2837 3036074 - 3036967 + | transposase TERM 2323 3037943 - 3037910 - g 72 -6.7 -4.28548 | overlap 3037900 3037897 AGCCACCCAGCAAAA CGCCGC-GCTGGTGG AAGAAG CCACG-GCTGCGGCG CGTGCGATGGAAGAA tsr 3037476 - 3038165 + | chemotaxis protein TERM 2324 3041403 - 3041370 - g 81 -9.4 -4.2828 | overlap 3041389 CGCCACCCAGCAAAA CGCCGCCTTGGTGG AAGAAG CCACCGCCGCGGCG CGCTCGATGGAAGCG TERM 2325 3041447 - 3041389 - g 81 -13.1 -3.61398 | gap 1, overlap 3041370 GCCTTGGTGGAAGAA GCCACCGCCGCGGCGCGCTCGATGGA AGCGCAGG CCCAGC-AGCTCACCGAAGCGGTGGC ACTGTTCCGCCTGTC tsr 3039181 - 3041598 + | chemotaxis protein TERM 2326 3041777 - 3041798 + F 100 -11.5 -4.8622 | GTCACTCTTCTCGAA GCCGCGCTC TCCC GGGTGCGGC TTTTTCATTGCACCG TERM 2327 3042196 - 3042211 + G 74 -4.6 -4.55697 | GGCGTTGGAGATCTC GCGCTG GCCA CAGGGC TTTGTTTGTCCGCGT TERM 2328 3042929 - 3042945 + G 74 -10.1 -3.70902 | opp_overlap 3042924, overlap 3042930 CTGGCAGAGACGATG TGGCGGT TCA ACCGCCG TTTCGATCTGACCCG XOO2841 3042044 - 3043060 + | transposase TERM 2329 3044328 - 3044312 - g 79 -6.5 -4.56597 | overlap 3044314 CTGCCCGGCGAAAAA GCCGC CATCACC GCGGC GATGAACCAGGTCAA TERM 2330 3044937 - 3044919 - g 72 -3 -4.63218 | overlap 3044920 CCTCGTCCAAGAAAA TCGCCGAC ATC ATCAGCGT CATCGACGGCATCGC tsr 3043301 - 3045559 + | chemotaxis protein TERM 2331 3045611 - 3045586 - f 100 -19.1 -4.44448 | opp_overlap 3045586 ACGACTGCAAACAAA CACCGCGTTCG GTAG CGAACGCGGTG TTTTTTTTTCATGTG TERM 2332 3045586 - 3045611 + F 100 -19.1 -6.19443 | opp_overlap 3045586 ACGACTGCAAACAAA CACCGCGTTCG GTAG CGAACGCGGTG TTTTTTTTTCATGTG TERM 2333 3045763 - 3045732 - g 75 -10 -3.90588 | GAGCGGTTAACCAAA CGATGGCGCTCACC GCCA GGCGAGCGCGGCCG GTGCTCGGAACGGCA XOO2843 3045653 - 3045805 + | hypothetical protein TERM 2334 3047794 - 3047776 - g 72 -3 -4.63218 | overlap 3047777 CCTCGTCCAAGAAAA TCGCCGAC ATC ATCAGCGT CATCGACGGCATCGC tsr 3046089 - 3048401 + | chemotaxis protein TERM 2335 3048545 - 3048489 - f 81 -15.1 -3.01712 | opp_overlap 3048493 3048508, overlap 3048474 3048508 CCGTGTGTTGGAACA CGGGCCGGGCCCGATCGAACGTCTG TCGTCTG CAGACGTTTGATCGGGCCCGCGTTG CATTGATCGCCCCAA TERM 2336 3048493 - 3048542 + F 100 -26 -3.20723 | gap 1, opp_overlap 3048489 3048508, overlap 3048508 GTGTTGGAACACGGG C-CGGGCCCGATCGAACGTCTGT CGTCT GCAGACGTTTGATCGGGCCCGCG TTGCATTGATCGCCC tsr 3049090 - 3051165 + | chemotaxis protein TERM 2337 3052022 - 3052006 - g 87 -7.3 -4.75472 | GCCAGACGAAGAAAA TCAACAC TTT GTGTCGA TCATCGAAGAGCAGC tsr 3051758 - 3054019 + | chemotaxis protein TERM 2338 3054094 - 3054044 - f 70 -10.5 -3.59979 | gap 2, opp_overlap 3054066 3054076 3054079, overlap 3054049 3054052 3054074 CGTTCTGATCGCAAA GGCAACATCGCCACGATAGTCCGTC GCA AACGG-CTGTCGTGGCATTG-CGCC AATGCCGCGCCTGGT TERM 2339 3054190 - 3054179 - f 72 -4.4 -4.64495 | ATTTAACAAAAATAA CGTT TTTC AACG AACGAAATGCAGAAT tsr 3054413 - 3056674 + | chemotaxis protein TERM 2340 3056871 - 3056899 + F 100 -11.8 -5.67063 | gap 1 TCCGCAGATCTTATG GGCCGCTT-CCCT TGCG AGGGTAAGCGGTC TTTTTTTGTGCTGCC XOO2849 3057632 - 3058429 + | hypothetical protein cheW 3058639 - 3059046 + | chemotaxis protein XOO2851 3059824 - 3059276 - | putative ISXo8 transposase XOO2852 3059832 - 3060251 + | putative transposase XOO2853 3060217 - 3060693 + | putative transposase XOO2854 3060936 - 3061259 + | hypothetical protein TERM 2341 3061308 - 3061260 - f 85 -15.3 -3.41693 | gap 1, opp_overlap 3061267, overlap 3061261 GCCACCATCAAGTAA GCGCCTC-GCACATCGCCACGC CCCCGC GCGTGGCGATGTGCTGTTGCGG CCATGCGAACTGACG TERM 2342 3061307 - 3061261 - f 87 -18.8 -2.64695 | gap 1, opp_overlap 3061267, overlap 3061260 CCACCATCAAGTAAG CGCCTC-GCACATCGCCACGC CCCCGC GCGTGGCGATGTGCTGTTGCG GCCATGCGAACTGAC TERM 2343 3061267 - 3061300 + F 100 -22.6 -3.02511 | opp_overlap 3061261 3061260 TCAAGTAAGCGCCTC GCACATCGCCACGC CCCCGC GCGTGGCGATGTGC TGTTGCGGCCATGCG TERM 2344 3062118 - 3062092 - f 76 -15.2 -2.52795 | overlap 3062079 AAGTGGGCGAATTGA TGCGCTCCATGC AGC GCATGCAGCGCA TGCAGCGCGACCTGA TERM 2345 3063693 - 3063644 - f 70 -10.6 -3.64703 | CCGGTTGCAGTGAAA GGCGCCGCCGCCA-AGCCGCTAGC GCGG GC-AGCGGCCACCGCGGCGCGGCC TGCCACATCCCAGGC TERM 2346 3063763 - 3063783 + F 95 -19.7 -3.39327 | opp_overlap 3063763 CGCTGTCACCCACAA CGCCCCGGC ACG GCCGGGGCG TTGTGCATCTGGGCA TERM 2347 3063783 - 3063763 - f 95 -19.7 -3.35679 | opp_overlap 3063763 CGCTGTCACCCACAA CGCCCCGGC ACG GCCGGGGCG TTGTGCATCTGGGCA TERM 2348 3064340 - 3064323 - g 75 -7.7 -4.24123 | gap 1, overlap 3064324 CGAAGAACTGCAAAA GCGCGCCT CGC AGGCGC-C GTTGAAGATCTGGTC cheR 3064003 - 3064869 + | chemotaxis protein methyltransferase cheD 3064866 - 3065462 + | chemoreceptor glutamine deamidase CheD TERM 2349 3066352 - 3066400 + G 76 -13.7 -3.14132 | gap 1, opp_overlap 3066378 3066379 CACCGGAATGGGCGA CGACGGCGCGCGCGGGCTGCTG GAAATG CTGCAGGCCG-GCGCGCCGACC TTGGTGCAGGACGAG cheB 3065459 - 3066535 + | chemotaxis-specific methylesterase TERM 2350 3067456 - 3067486 + G 71 -13.2 -3.01712 | opp_overlap 3067458, overlap 3067458 GCCGATCCGCTCCAA CAGCGCGCGCGTGC TCG GCACCTTCGCGCTG TATTACCGCAAGCCG pdeA 3066701 - 3068887 + | c-di-GMP phosphodiesterase A pcaD 3070358 - 3069543 - | beta-ketoadipate enol-lactone hydrolase TERM 2351 3070687 - 3070657 - R 100 -19.8 -3.53811 | opp_overlap 3070663, overlap 3070658 3070663 GCCATTGCCCGGAAA GCGAAATGCCCGGC AGT GCCGGGCATTTCGG GACAACACAGACCAG TERM 2352 3070686 - 3070658 - R 100 -23.3 -2.72144 | opp_overlap 3070663, overlap 3070657 3070663 CCATTGCCCGGAAAG CGAAATGCCCGGC AGT GCCGGGCATTTCG GGACAACACAGACCA TERM 2353 3070663 - 3070681 + r 89 -16 -3.53012 | opp_overlap 3070658 3070657 3070663 GCCCGGAAAGCGAAA TGCCCGGC AGT GCCGGGCA TTTCGGGACAACACA TERM 2354 3070681 - 3070663 - R 95 -16 -3.84451 | opp_overlap 3070663, overlap 3070658 3070657 GCCCGGAAAGCGAAA TGCCCGGC AGT GCCGGGCA TTTCGGGACAACACA TERM 2355 3070742 - 3070712 - R 86 -15.4 -3.54741 | overlap 3070702 GACCAGCGGCTGAAA TCAGGCCGCGACGG TGT CCGCCACGTCCTGA TACTCCTGGATCTGA acnB 3073303 - 3070712 - | bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase XOO2863 3073779 - 3073369 - | hypothetical protein TERM 2356 3073504 - 3073531 + g 71 -9.2 -3.7732 | gap 1, overlap 3073517 CGCCACCACCCGCTC GCGCTTGCCGC CGCGTGC GCGG-AAGCGC TTGTTCATATGACCG XOO2864 3074048 - 3073776 - | hypothetical protein TERM 2357 3075705 - 3075686 - g 72 -12.8 -3.17212 | CGATTACCTGAGCAA GGCCGGCG TGCT CGCCGACC TGGAAAAACTGGGTT rpfA 3074172 - 3076940 + | aconitate hydratase TERM 2358 3077000 - 3076972 - T 84 -16.8 -3.07816 | gap 1, opp_overlap 3076972 GCTCCACCCATGCAA CGC-ACTCCCGCC GCTT GGCGGGAGTGGCG TTTCCGGTCTCGTGA TERM 2359 3076972 - 3077000 + T 91 -16.8 -3.64599 | gap 1, opp_overlap 3076972 GCTCCACCCATGCAA CGC-ACTCCCGCC GCTT GGCGGGAGTGGCG TTTCCGGTCTCGTGA XOO2866 3077347 - 3077063 - | hypothetical protein XOO2867 3077555 - 3077400 - | hypothetical protein TERM 2360 3078557 - 3078569 + G 82 -6.3 -4.7497 | TCAATACACCCGGTT TCGAT CAG ATCGA TTTTTCCTCACTCAA rpfB 3077677 - 3079272 + | putative long-chain fatty acyl CoA ligase TERM 2361 3079315 - 3079344 + F 100 -19.4 -4.19735 | TTCAGTCTCCGACGA CGCCCGCAATGC GACAAG GCATTGCGGGCG TTTGCTTTTACACGC rpfF 3079323 - 3080318 + | enoyl-CoA hydratase rpfC 3082507 - 3080330 - | RpfC rpfG 3084131 - 3082872 - | response regulator TERM 2362 3084133 - 3084117 - G 71 -12.3 -3.20858 | overlap 3084109 3084118 TAGCATATGCAGTAA GTGTGCC GTC GGCACAC CGACAGCACAAAAAA TERM 2363 3084143 - 3084118 - G 77 -15.5 -2.52193 | overlap 3084117 3084109 AGCATATGCAGTAAG TGTGCCGTCGG CACA CCGACAGCACA AAAAAATTAGGCTTC lysS 3085736 - 3084150 - | lysyl-tRNA synthetase TERM 2364 3085019 - 3085045 + g 71 -10.8 -3.66178 | overlap 3085009 GCTTGGCCGTGGCGC CGCCGGGGATGT AAT GCATCATCGGCG TTTCCACTTCCAGGA TERM 2365 3085575 - 3085595 + g 75 -12.5 -3.53224 | overlap 3085593 CGGGTAGGCGATGCC CTGGCCGCG CAA CGCGCCCAG TTTCGCGCGGCGCTC TERM 2366 3085833 - 3085885 + r 71 -11.3 -3.53444 | gap 3 GGTACTGCGGAGCTG CGCCAGGATGCC-GTCGCGACG-GCC ACTT GGCGCATCG-GTCAGGCATCCAGGCG TTTGGAGCCCGCTGC prfB 3086860 - 3085871 - | peptide chain release factor 2 rpfD 3088332 - 3087250 - | regulatory protein XOO2875 3088306 - 3089607 + | inner membrane protein TERM 2367 3090489 - 3090458 - fH 71 -13 -3.05384 | opp_overlap 3090467 GTCGCCTTGATTGAA GCGCAGACAGTGCA TGCA TGCTCTGTCTGCGG AAGCGCCAGTCAAGC XOO2880 3091005 - 3091706 + | hypothetical protein XOO2881 3092349 - 3091867 - | hypothetical protein XOO2882 3093507 - 3092539 - | transposase TERM 2368 3092568 - 3092594 + g 71 -7.3 -4.18494 | gap 1, overlap 3092568 CAACGCTGTTGAGGA C-CTCCTCGGAG AAGA CTTCGAGGGGCG TTTTGAATCCAAGTA XOO2883 3094851 - 3093835 - | transposase TERM 2369 3093966 - 3093950 - G 74 -10.1 -3.70902 | opp_overlap 3093945, overlap 3093951 CGGGTCAGATCGAAA CGGCGGT TGA ACCGCCA CATCGTCTCTGCCAG TERM 2370 3094699 - 3094684 - G 74 -4.6 -4.55697 | ACGCGGACAAACAAA GCCCTG TGGC CAGCGC GAGATCTCCAACGCC TERM 2371 3095061 - 3095079 + r 73 -3.1 -4.71426 | gap 1, opp_overlap 3095017 CCTGCCCCATCGAGG CCGTAGAC GTAA GTC-GCGG TTTTGTTAGTAGGGA TERM 2372 3095569 - 3095540 - R 78 -10 -4.0942 | gap 1 TAGCGACTACACAAA GCCCGCGGTCAAC GCGTG ACTG-CCGCGGGC TCGCAATGCTCGACG recJ 3097287 - 3095548 - | single-stranded-DNA-specific exonuclease rpfE 3098204 - 3097284 - | regulatory protein TERM 2373 3097509 - 3097453 - G 72 -13 -3.05715 | gap 1, overlap 3097457 3097476 AACTGCTGCAGGGAA CGCAGATGGCGCAGGTCCACCAACGCA TCGA CGCGTTGTTCGCCCTGCGC-ATCGGCA CCTGCGGCCAACGCC TERM 2374 3097553 - 3097531 - G 74 -14.8 -2.55074 | GCCAACGCCAACGCA CGCAGCAGCG ATT CGCGGCTGCG CACCTGGCGATGCGG TERM 2375 3098139 - 3098171 + g 86 -12.8 -3.85698 | gap 2, overlap 3098107 AAGCGCACGCGCCAC CGCCGTGTTGCCCAGG GTT CC-GGGCAG-ACGGCG TTTCTCCGGCAGCAG greA 3098733 - 3098221 - | transcription elongation factor GreA TERM 2376 3098361 - 3098392 + gr 76 -10.8 -3.71998 | overlap 3098362 GTCCCATCTTGATGT CCGCTTCCAGGTCG CCAA CGATCTGGTAGCGC TTCTCTTCGTCGGTC TERM 2377 3098362 - 3098391 + gr 77 -14.3 -2.82717 | overlap 3098361 TCCCATCTTGATGTC CGCTTCCAGGTCG CCAA CGATCTGGTAGCG CTTCTCTTCGTCGGT carB 3101936 - 3098694 - | carbamoyl phosphate synthase large subunit TERM 2378 3099027 - 3099056 + gr 74 -14.3 -2.58544 | gap 1, opp_overlap 3099015, overlap 3099026 3099029 AAAGCCCCGTTCCAC CAGCGCCTGC-GCC ACC GGCAGCACGCGCTG CTTGTCCGGATCGCG TERM 2379 3101959 - 3101985 + r 75 -13.6 -2.97171 | overlap 3101957 CTCAGTAAAGTCGGT CCTGCCACGCCG TTG CGGCGAGCCAGG TAATTTGGTCGGGTG TERM 2380 3102064 - 3102098 + r 78 -12.1 -3.79906 | gap 1, overlap 3102065 GCATCGCGGCCCAGC TGGGAGCGGC-TGCGC CGAT GCGCGCGCCGATCCCG TTGTTGTGCGCATCC TERM 2381 3102065 - 3102097 + r 74 -13.4 -2.87622 | gap 1, overlap 3102064 CATCGCGGCCCAGCT GGGAGCGGC-TGCGC CGAT GCGCGCGCCGATCCC GTTGTTGTGCGCATC TERM 2382 3102359 - 3102341 - R 74 -10.2 -3.75629 | CATCGCCAACGCAAA CACCCGCC AAT GGCGTGTG CGCGGCAGCGAGGCC carA 3103512 - 3102388 - | carbamoyl phosphate synthase small subunit TERM 2383 3102702 - 3102757 + g 72 -13.4 -3.14344 | gap 1, opp_overlap 3102706, overlap 3102706 CGGCGGCCAGCGCCA GCAACTGATGGCCCAGGCAGATGCCGA AGG TCGGCACCT-TCTGCGCGATCAGTTCC TTGATCGCACCGATC TERM 2384 3102706 - 3102753 + g 77 -12.8 -3.39895 | gap 1, opp_overlap 3102706, overlap 3102702 GGCCAGCGCCAGCAA CTGATGGCCCAGGCAGATGCCGA AGG TCGGCACCT-TCTGCGCGATCAG TTCCTTGATCGCACC TERM 2385 3102753 - 3102706 - G 72 -12.8 -3.15544 | gap 1, opp_overlap 3102702 3102706 GGCCAGCGCCAGCAA CTGATGGCCCAGGCAGATGCCGA AGG TCGGCACCTTC-TGCGCGATCAG TTCCTTGATCGCACC TERM 2386 3103074 - 3103089 + g 82 -6.8 -4.60041 | gap 1 GGCCGGGGAACCTGC GCGC-GG CGT CCAGCGC TTTTTCGACGTCGAT TERM 2387 3104153 - 3104173 + r 80 -14.7 -3.14211 | CTGTTGGGCCGCATC GCGCAGTGC CAC GCGCTGCGC TTCGTCCAGCCCGGT TERM 2388 3104554 - 3104564 + r 76 -8.2 -4.20084 | overlap 3104553 TCGTCACCGCGGGAG CGCG TTG CGCG TTTTGCGTGGCTGCT XOO2893 3105670 - 3105224 - | transposase TERM 2389 3105287 - 3105318 + g 100 -2.9 -5.86061 | overlap 3105286 TTTTGGTGTTCCATC CGCCCCGCGATTT CCCGAT GGATTGTGGGCCG TTTTTTTTAATGCGC XOO2894 3106415 - 3105696 - | hypothetical protein avtA 3107614 - 3106412 - | valine-pyruvate aminotransferase XOO2896 3108156 - 3107848 - | hypothetical protein XOO2897 3108411 - 3108184 - | hypothetical protein XOO2898 3108722 - 3108468 - | hypothetical protein feoB 3110589 - 3108724 - | ferrous iron transport protein B feoA 3110870 - 3110580 - | ferrous iron transport protein XOO2901 3110943 - 3111740 + | enoyl-CoA hydratase XOO2902 3111737 - 3112126 + | hypothetical protein mvaB 3112197 - 3113216 + | hydroxymethylglutaryl-CoA lyase hadH2 3113233 - 3114003 + | 3-hydroxyacyl-CoA dehydrogenase type II yeiP 3114125 - 3114691 + | elongation factor P XOO2906 3114844 - 3115077 + | hypothetical protein XOO2907 3116036 - 3115584 - | hypothetical protein xylE 3118385 - 3116940 - | MFS transporter TERM 2390 3118061 - 3118038 - G 70 -5.9 -4.21773 | overlap 3118057 GGCGAAGATAAAGAA GCCGGAACT GTGCGA AGCACCGGC GCCGATGGCCGAGAG xylA 3119789 - 3118452 - | xylose isomerase XOO2911 3121343 - 3119838 - | D-xylulokinase TERM 2391 3120215 - 3120247 + g 71 -11.9 -3.22475 | overlap 3120213 TGTAGGTAGCGCCTT CCATCGCGGCGCGAT AAA AATGCGCGGCGGTGG TGTTGTGCAAATCCA XOO2912 3121891 - 3121328 - | hypothetical protein XOO2913 3122463 - 3121675 - | hypothetical protein xylS 3125452 - 3122549 - | alpha-xylosidase XOO2915 3125733 - 3126056 + | relaxation protein gbpR 3127291 - 3126254 - | galactose-binding protein regulator TERM 2392 3126924 - 3126942 + g 70 -5.8 -4.24342 | overlap 3126925 GCCTGGCCCATGCAC CCGGCGCG CAG CGCGGCGA TTTCTTCCTGCGCCC TERM 2393 3127731 - 3127714 - g 71 -7.7 -4.16016 | gap 1, opp_overlap 3127726 3127727 TCACGCCGGAAGAAA CGCTCGAC CAT GTCG-GCG CGCTGATCGACGCCG dgoA 3127638 - 3128270 + | 2-dehydro-3-deoxy-6-phosphogalactonate aldolase TERM 2394 3128950 - 3128896 - f 78 -14.3 -3.01712 | opp_overlap 3128899 GCTGTTCGTCGAAGA GCCGGTGCTGGCCGAACAGGC-CGAGT ACT ACCCGCGCCTGGCCG-CCAGCACCTCC ATTCCGCTGGCCGCC TERM 2395 3128899 - 3128947 + F 74 -14.6 -2.53876 | opp_overlap 3128896 GTTCGTCGAAGAGCC GGTGCTGGCCGAACAGGC-CGAGT ACT ACCCGCGCCTGGCC-GCCAGCACC TCCATTCCGCTGGCC TERM 2396 3129539 - 3129529 - gf 88 -8.2 -4.69664 | overlap 3129530 GACATCAGCGAAAAA CGCC TGT GGCG GCACCATCCGGCCAG XOO2918 3129409 - 3130320 + | regucalcin TERM 2397 3130416 - 3130451 + GF 73 -12.5 -3.14564 | opp_overlap 3130406 AGCAACGGCGTCCTC GCCTGCCAGGGCCGC TTCGCC GAGGTACTGGCAGGC TTGGTCGACGGCTGG dgoK 3130269 - 3131195 + | 2-oxo-3-deoxygalactonate kinase XOO2921 3131278 - 3131601 + | ferredoxin TERM 2398 3131704 - 3131672 - T 86 -16.3 -3.17714 | opp_overlap 3131679, overlap 3131673 3131679 GCAAATTCCCACCAA CGCAAAACGGGCGCC TGA AGCGCCCGTTCTGCT ATCCAGCACACTGAA TERM 2399 3131703 - 3131673 - T 90 -19.8 -2.50307 | opp_overlap 3131679, overlap 3131672 3131679 CAAATTCCCACCAAC GCAAAACGGGCGCC TGA AGCGCCCGTTCTGC TATCCAGCACACTGA TERM 2400 3131679 - 3131697 + T 76 -13.1 -3.46602 | opp_overlap 3131673 3131672 3131679 CCCACCAACGCAAAA CGGGCGC CTGAA GCGCCCG TTCTGCTATCCAGCA TERM 2401 3131697 - 3131679 - T 100 -13.8 -4.30014 | opp_overlap 3131679, overlap 3131673 3131672 CCCACCAACGCAAAA CGGGCGCC TGA AGCGCCCG TTCTGCTATCCAGCA XOO2922 3132319 - 3131726 - | hypothetical protein dapA 3133169 - 3132261 - | dihydrodipicolinate synthase TERM 2402 3132961 - 3132933 - GH 87 -14.6 -3.56273 | gap 1 TTCAGTACCAGACAA GCCG-GTGCCGGC CAGC ACCGGCACGCGGC CGGCCACCTGGGCAA gcvR 3133263 - 3133889 + | glycine cleavage system transcriptional repressor XOO2925 3133901 - 3134251 + | hypothetical protein TERM 2403 3134639 - 3134663 + G 82 -5.6 -4.8048 | opp_overlap 3134639 3134637 3134640 CATGTACGGCAAACA GGTGCTCGGC ATCGA GCGCAGCACC TTTTTGCTATCGCCC XOO2926 3134289 - 3134771 + | bacterioferritin comigratory protein TERM 2404 3135121 - 3135141 + G 88 -8.2 -4.59773 | ATCCAGCTCAAGGGC CAGGCCGC GATCG GCCGCCTG TTTTTCCAGATCAAA TERM 2405 3135254 - 3135240 - g 79 -5.6 -4.63218 | opp_overlap 3135243, overlap 3135241 GCTGCGCGAAGAAAA TCCGGA TGT TCCGGT CATCCTGGTGTCCAA TERM 2406 3135560 - 3135520 - g 73 -12.6 -3.36273 | gap 1 CCCGGCGAAGACGAA GTGGAGCTGCGCGTCGCCA AGGT TGGCGGCG-GCAAGTCCAC GCTGTGCCTGGTCGA XOO2927 3134854 - 3136251 + | hypothetical protein TERM 2407 3136814 - 3136776 - f 100 -23.3 -2.87132 | opp_overlap 3136763 CGTGGTGTCGACACA CCGATTCTGCACAGCCG CAATC CGGCAGTGCAGAATCGG CAGATGACCACGCCC thiD 3136818 - 3137627 + | phosphomethylpyrimidine kinase XOO2929 3137735 - 3137932 + | hypothetical protein TERM 2408 3138337 - 3138327 - g 75 -6.8 -4.40804 | overlap 3138328 CATTACTCGACAAAA TGCC GCA GGCA CACGCGGCCCACGTA XOO2930 3138026 - 3138487 + | hypothetical protein TERM 2409 3138624 - 3138639 + T 81 -2.6 -5.15969 | gap 1, opp_overlap 3138624 CAGAGCAAAAAAAGA CAGC-AT TCA ATCGCTG TTTTTTCAGTTAAAA TERM 2410 3138789 - 3138804 + T 100 -6.8 -5.83822 | opp_overlap 3138789 AACCTTGAAGAAAAC GGCCAG CTTG CTGGTC TTTTTTTTGCCTGTC TERM 2411 3138856 - 3138840 - T 77 -15.1 -2.64616 | opp_overlap 3138840 TGCGGATGCAGATGA CGGCGCG CAT CGCGCCG TATCGTCGTGCGCTG TERM 2412 3138840 - 3138856 + T 79 -15.1 -2.82834 | opp_overlap 3138840 TGCGGATGCAGATGA CGGCGCG CAT CGCGCCG TATCGTCGTGCGCTG XOO2931 3139928 - 3138942 - | hypothetical protein TERM 2413 3139436 - 3139425 - G 82 -5.8 -4.83615 | GAGTTCGGACAAAAA GACG AGCA CGTC CTGCACCTGGTGCGC XOO2932 3140917 - 3139973 - | transcriptional regulator TERM 2414 3140234 - 3140207 - G 79 -11.2 -3.85698 | opp_overlap 3140227 CGGCTCGGGCAGAAA GCCGTAGCCGGC GCCA GCCAGCTGCAGC AGCAGCTTGGTGCGC XOO2933 3141054 - 3141755 + | hypothetical protein XOO2934 3142382 - 3142083 - | endolysin rsc17 3142655 - 3142425 - | bacteriophage endolysin protein TERM 2415 3142698 - 3142677 - R 91 -5.7 -5.36441 | TGCGGATACAAAAAA GCCCCATCG TCGC CGGCAGGGC TTGGGTCACACGTCG XOO2936 3143648 - 3142899 - | isopentenyl transferase XOO2937 3145748 - 3145221 - | hypothetical protein TERM 2416 3145871 - 3145915 + r 83 -14.9 -3.48276 | opp_overlap 3145877, overlap 3145844 3145873 CGTGACCTCGTGCTC CACGAAGCCCCCGCACTTGTC TTG GTCGACGGCGGGGGCTTCGTC TTCTCTGGACGAAAG TERM 2417 3145873 - 3145913 + r 91 -17.5 -3.31726 | opp_overlap 3145877, overlap 3145844 3145871 TGACCTCGTGCTCCA CGAAGCCCCCGCACTTGTC TTG GTCGACGGCGGGGGCTTCG TCTTCTCTGGACGAA TERM 2418 3146129 - 3146167 + r 93 -19.1 -3.28712 | opp_overlap 3146107 3146129 3146133 3146141, overlap 3146133 3146140 3146141 GTAGAGGCAACGCAA CCAACAAAAAAACCCGC ATTTA GCGGGGTTTTTTGTTGG TTATGGCGGAGCGAG TERM 2419 3146167 - 3146129 - R 93 -19.1 -3.20164 | opp_overlap 3146129 3146133 3146140 3146141, overlap 3146107 3146133 3146141 GTAGAGGCAACGCAA CCAACAAAAAAACCCGC ATTTA GCGGGGTTTTTTGTTGG TTATGGCGGAGCGAG TERM 2420 3146133 - 3146163 + r 76 -12.7 -3.44146 | opp_overlap 3146133 3146129 3146141, overlap 3146129 3146140 3146141 AGGCAACGCAACCAA CAAAAAAACCCGC ATTTA GCGGGGTTTTTTG TTGGTTATGGCGGAG TERM 2421 3146163 - 3146133 - R 76 -12.7 -3.40788 | opp_overlap 3146129 3146133 3146140 3146141, overlap 3146129 3146141 AGGCAACGCAACCAA CAAAAAAACCCGC ATTTA GCGGGGTTTTTTG TTGGTTATGGCGGAG TERM 2422 3146140 - 3146156 + r 100 -5 -5.57396 | opp_overlap 3146133 3146129 3146141, overlap 3146133 3146129 3146141 GCAACCAACAAAAAA ACCCGC ATTTA GCGGGG TTTTTTGTTGGTTAT TERM 2423 3146155 - 3146141 - R 100 -8.5 -5.87996 | opp_overlap 3146141 3146140 3146133 3146129, overlap 3146133 3146129 CAACCAACAAAAAAA CCCGC ATTTA GCGGG GTTTTTTGTTGGTTA TERM 2424 3146141 - 3146155 + r 71 -8.5 -3.91997 | opp_overlap 3146133 3146129 3146141, overlap 3146140 3146133 3146129 CAACCAACAAAAAAA CCCGC ATTTA GCGGG GTTTTTTGTTGGTTA TERM 2425 3146249 - 3146265 + r 100 -4.3 -6.15828 | GAGCCCCTTCAGCCG CTCGGGC ATC GCTCCAG TTTTTTTTTGCTGCC csrA 3146563 - 3146351 - | carbon storage regulator alaS 3149351 - 3146703 - | alanyl-tRNA synthetase recX 3149980 - 3149453 - | recombination regulator RecX TERM 2426 3150068 - 3150022 - R 74 -13.9 -2.87132 | gap 1, opp_overlap 3150061, overlap 3150035 CTGGCCTTCGATAGA TCTACCGCGAGAAGCGACGG CACTGACT CCGCCG-TCCTCGCGATAGA AAAACTTCAAACGCT recA 3151365 - 3150244 - | recombinase A TERM 2427 3151023 - 3151009 - G 72 -12.8 -3.14132 | opp_overlap 3151003 CTCGGCGTCGATGAA GGCGGC GGT GCCGCC CAGCTTCTGACACTG lexA 3152128 - 3151451 - | LexA repressor aarF 3153908 - 3152181 - | ubiquinone biosynthesis protein XOO2944 3154829 - 3154335 - | hypothetical protein TERM 2428 3155255 - 3155224 - R 90 -19.6 -2.71011 | gap 1, opp_overlap 3155232, overlap 3155232 ATTCGCTTTGAAGCA GCAGCACAGTCGCGC TAT GCG-GACTGTGCTGC CTGCATCACGCTTCC hflX 3156580 - 3155261 - | GTP-binding protein TERM 2429 3155862 - 3155839 - G 74 -11 -3.61398 | CCGTGTCGGCAAGAA TCGCGCTACC GCCC GGCAACGCGA TGCGCCGCACGGTGG hfq 3156921 - 3156592 - | RNA-binding protein Hfq miaA 3158012 - 3156948 - | tRNA delta(2)-isopentenylpyrophosphate transferase TERM 2430 3158924 - 3158887 - R 100 -25.1 -3.30124 | opp_overlap 3158895, overlap 3158888 TGCTACGCCCGATAA CGCATCAAGGCCGGGAA TCGC TTCCCGGCCTTGATGCA TGCCGCTGCAGATCA TERM 2431 3158923 - 3158888 - R 100 -26.4 -2.57931 | opp_overlap 3158895, overlap 3158887 GCTACGCCCGATAAC GCATCAAGGCCGGGAA TCGC TTCCCGGCCTTGATGC ATGCCGCTGCAGATC TERM 2432 3158895 - 3158916 + r 83 -15.9 -3.18383 | opp_overlap 3158888 3158887 CCGATAACGCATCAA GGCCGGGAA TCGC TTCCCGGCC TTGATGCATGCCGCT hflB 3160899 - 3158953 - | cell division protein ftsJ 3161629 - 3160955 - | cell division protein TERM 2433 3161950 - 3161931 - g 70 -4.9 -4.4078 | CCCCGGCAAGGAAAA GCGCCAG ATTGTG CTGCCGC GCGGCTGAGCCAACG XOO2951 3161653 - 3161958 + | hypothetical protein XOO2952 3161974 - 3162348 + | hypothetical protein nlpD 3163341 - 3162541 - | lipoprotein XOO2954 3163925 - 3163311 - | hypothetical protein pcm 3164621 - 3163944 - | L-isoaspartate protein carboxylmethyltransferase type II surE 3165421 - 3164618 - | stationary phase survival protein SurE XOO2957 3165431 - 3166036 + | hypothetical protein truD 3167560 - 3166451 - | tRNA pseudouridine synthase D ispF 3168172 - 3167681 - | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase ispD 3169146 - 3168328 - | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase TERM 2434 3168654 - 3168631 - G 75 -10.2 -3.90922 | opp_overlap 3168620 ATGGCGCCGAAACAA CTGCGGCGTG AGTG CGCGCCACAG ACGTTCGCGTGGTTC TERM 2435 3169092 - 3169082 - G 77 -8.2 -4.25283 | overlap 3169083 AGCGGCCCACCAAAA CGCG TGC CGCG CCCCGCAGCCGGCAC ftsB 3169508 - 3169143 - | cell division protein FtsB eno 3170885 - 3169512 - | phosphopyruvate hydratase XOO2964 3171180 - 3170929 - | hypothetical protein kdsA 3172117 - 3171287 - | 2-dehydro-3-deoxyphosphooctonate aldolase TERM 2436 3171498 - 3171444 - G 70 -11.3 -3.4096 | gap 1, overlap 3171442 AACAGACCCGAAATA CCGACCGCCACCGC-AGCGCGCGCCA GCAC CGGCACGAACTCGCGCTGGCCGCCAG AGCTGCTGCCCTGCC TERM 2437 3172162 - 3172138 - R 81 -15.7 -3.08133 | CACCTATTGATTGAA GCCCCTCTCCC GTC GGGAGAGGGGT TGGGGTGAGGGTACG pyrG 3173985 - 3172321 - | CTP synthetase TERM 2438 3173960 - 3173921 - G 78 -13.6 -3.19371 | gap 1, opp_overlap 3173925 ATGGACGCAAGCGAA GCGGCGGCAATGCCCTTGC CTA GCGAGGACACTA-CGCCGC CGGTAACGAAAATCA TERM 2439 3174135 - 3174102 - R 100 -23.9 -3.53012 | overlap 3174079 3174103 TGCGCGGGCCGCAAA TGCAGACGCCCCGGC CTGA GCCGGGGCGTCTGCG TATCACTCAAGCGAT TERM 2440 3174134 - 3174103 - R 100 -27.4 -2.71712 | overlap 3174079 3174102 GCGCGGGCCGCAAAT GCAGACGCCCCGGC CTGA GCCGGGGCGTCTGC GTATCACTCAAGCGA XOO2968 3174402 - 3174160 - | hypothetical protein parE 3174435 - 3176456 + | DNA topoisomerase IV subunit B XOO2970 3176951 - 3176475 - | putative transposase XOO2971 3177384 - 3176917 - | putative transposase TERM 2441 3177352 - 3177328 - GH 81 -13.5 -3.54424 | overlap 3177329 TTCTAGGCGTTGAAA GCCCCCCTCCC CTC GGGAGAGGGGG TGGCGTGAGGGTACG TERM 2442 3177351 - 3177329 - GH 84 -17 -2.72511 | overlap 3177328 TCTAGGCGTTGAAAG CCCCCCTCCC CTC GGGAGAGGGG GTGGCGTGAGGGTAC XOO2972 3177689 - 3179197 + | carboxypeptidase-related protein TERM 2443 3179248 - 3179190 - T 90 -15.3 -3.76402 | gap 1, overlap 3179191 3179203 3179246 AGGCGATGTACGAAA CGCGCTGAATGCATCCATCGCCGGACGT CTCA ACGTCCGGCGATGGATGCGAA-ATAGCG TGGCGCCTACACTGC TERM 2444 3179249 - 3179191 - T 93 -19.7 -2.8552 | gap 1, overlap 3179190 3179203 3179246 GGCGATGTACGAAAC GCGCTGAAT-GCATCCATCGCCGGACGT CTCA ACGTCCGGCGATGGATGCGAAATAGCGT GGCGCCTACACTGCG TERM 2445 3179236 - 3179203 - T 100 -25.5 -2.52795 | overlap 3179190 3179191 AACGCGCTGAATGCA TCCATCGCCGGACGT CTCA ACGTCCGGCGATGGA TGCGAAATAGCGTGG TERM 2446 3179260 - 3179274 + T 71 -9.2 -3.71792 | opp_overlap 3179246, overlap 3179257 AGCGTGGCGCCTACA CTGCGC CAG GCGCGG TTGCTTTTACGTTCG XOO2973 3179887 - 3179255 - | hypothetical protein pitA 3181220 - 3180093 - | transport protein XOO2975 3181880 - 3181230 - | hypothetical protein tlyC 3182129 - 3183469 + | hemolysin TERM 2447 3183609 - 3183623 + G 93 -3.4 -5.38054 | opp_overlap 3183610 3183611, overlap 3183611 GCCGATCTGCAACAA AGCGCC TTC GGCGTA TTTTTGTTTCTGGCG TERM 2448 3183611 - 3183621 + G 77 -8.2 -4.31946 | opp_overlap 3183610 3183611, overlap 3183609 CGATCTGCAACAAAG CGCC TTC GGCG TATTTTTGTTTCTGG exoD 3183453 - 3184121 + | ExoD protein XOO2978 3184653 - 3184153 - | general stress protein XOO2979 3185715 - 3184714 - | hypothetical protein TERM 2449 3186631 - 3186645 + G 77 -4.9 -4.6902 | CGGTTGGTGGGGTTG CTCGC ACTAG GCGGG TTTTTCGAGTTGTAC TERM 2450 3187025 - 3187041 + G 72 -3 -4.59773 | GTGCGGCGTTCGCGT TTGCAT TTTTC GTGCAA TTTTTGGCGGTGCCC XOO2980 3186520 - 3187935 + | MFS transporter TERM 2451 3187979 - 3187938 - T 70 -8 -4.07885 | gap 2, opp_overlap 3187968 GATTGCGGGCTAAAA CGGCTAACCCAGTGCCAGGC GCGC GCCTGGCG-TGCGC-AGCCG GTGCGCCGCGTACCC XOO2981 3190027 - 3188243 - | ABC transporter ATP-binding protein XOO2982 3191128 - 3190058 - | hypothetical protein TERM 2452 3190916 - 3190877 - GH 81 -12.1 -3.83502 | gap 1 CAGCGTGACATGAAA TTCCGGCGCGCCCG-GCA AGCGA TGCGCGGGCAAGCCGGCA TAGGCAGCATCGACC TERM 2453 3191609 - 3191629 + GH 70 -11.8 -3.14564 | ATGATCGGGCAAGCC CGCGCGGC CGGTT GCCGCGTG TTGGTGGCAGGCTCG TERM 2454 3191849 - 3191810 - gH 78 -14.2 -3.09635 | gap 1, overlap 3191775 ATTGCCACCAGCCAA CCTGCGGTTGCGCG-TGTG CAT CCCGGCGCGCAACCGCCGG ACGCACGCCTGAGCG XOO2983 3191087 - 3192769 + | Mg-protoporphyrin IX monomethyl ester oxidative cyclase TERM 2455 3192976 - 3193032 + G 100 -23.1 -3.28712 | gap 2, overlap 3192979 CGGCTGCAATGGCAG CTGGCGGCG--GCGGCAGCGGCGGCAC ATGGC GTGTCGCCGCTGCTGCAGCGCCGCTCG TTGTGGCAGAACGCC TERM 2456 3192979 - 3193029 + G 100 -25.6 -2.82623 | gap 2, overlap 3192976 CTGCAATGGCAGCTG GCGGCG--GCGGCAGCGGCGGCAC ATGGC GTGTCGCCGCTGCTGCAGCGCCGC TCGTTGTGGCAGAAC TERM 2457 3193451 - 3193481 + G 75 -12.4 -3.55071 | opp_overlap 3193448 GTGTGGAGATCACTG CCCGGATCCGGCCG GAG CGCCCGCAACCGGG TTTGAACCCCTATCC XOO2984 3192859 - 3194073 + | hypothetical protein XOO2985 3195289 - 3194177 - | hexosyltransferase TERM 2458 3194264 - 3194228 - G 81 -12.9 -3.61715 | CACCTGCTCGAACAA CCGCGTCGTCGATGCAG CGT CTTCACGGACGGCGCGG CACTGCGCCGCCCAG TERM 2459 3194423 - 3194394 - G 71 -9.3 -3.74693 | gap 1 GCCCATTCGACCAAA TG-CCCGACGGCAG TGC CCACCGTCGGAACA CCGGCAACGGCAGCT XOO2986 3196485 - 3195286 - | glycosyltransferase TERM 2460 3195393 - 3195364 - G 73 -13.6 -2.90813 | gap 1, overlap 3195361 3195366 CACTGCGGCAAACGA CAGGCGCGCGTCG AAGTG CG-CGCGCACCTG AGTGCGTGAGGGACG bioC 3197311 - 3196538 - | biotin synthesis protein XOO2988 3198480 - 3197233 - | hypothetical protein TERM 2461 3198367 - 3198313 - GR 80 -14.2 -3.18264 | gap 1 GTGCGCATTGATCAA GCCCGGTGCCAGCA-CATGCCCCTG CAGATC CAGGCGCAAGGTGCCGGTGCCGGGC GTGCCACCGAAGCGC XOO2989 3199323 - 3198481 - | methyltransferase TERM 2462 3199188 - 3199204 + g 71 -10.1 -3.61398 | overlap 3199189 ACAATGTGGTGCGCA TGCGCTG GAT CAGCGCG TTGTTGCCACGCGGG XOO2990 3200455 - 3199604 - | hypothetical protein XOO2992 3202581 - 3201631 - | glycosyl transferase TERM 2463 3201869 - 3201811 - G 81 -13.1 -3.61517 | gap 2, opp_overlap 3201864 AGGTTCGTCGAACAA TGGCGCGCAACGCAGCGCCACCTGCCGCG ACT CGCGCAAGTTGGCGATGCGT-GC-CGGCA CATGCACGGTCTTGC XOO2993 3203831 - 3202578 - | lipopolysaccharide biosynthesis protein XOO2994 3204952 - 3203828 - | aminotransferase XOO2995 3205938 - 3204940 - | hypothetical protein XOO2996 3206749 - 3205859 - | hypothetical protein XOO2997 3207502 - 3206816 - | hypothetical protein TERM 2464 3207252 - 3207239 - G 70 -2.3 -4.59109 | CACATCCTGGAAAAA GCGTG TGCG CAGGC GATTGAGTCGGGTCG XOO2998 3207915 - 3207484 - | hypothetical protein XOO2999 3208331 - 3208840 + | cytochrome like B561 XOO3000 3208837 - 3210264 + | cytochrome C TERM 2465 3210475 - 3210452 - g 74 -2.4 -4.76802 | opp_overlap 3210457 GGCAAAAACAAGAAA GGCC-CGTCC CTGTTC GG-CGTGGCC GGCCGCCCTGCCGGC cycA 3210317 - 3210682 + | cytochrome C2 XOO3002 3210834 - 3211913 + | hypothetical protein rpoE 3211965 - 3212558 + | RNA polymerase sigma-E factor XOO3004 3213208 - 3214533 + | serine protease ccmC 3214544 - 3215302 + | heme exporter protein C; cytochrome C-type biogenesis protein TERM 2466 3215494 - 3215473 - f 76 -13.7 -3.16564 | CCTGCACGCGATCAA CCCGCCCCA GTGC TGGAGCGGG AGGCGCCATGAATGC cycJ 3215502 - 3215972 + | cytochrome c-type biogenesis protein CcmE TERM 2467 3216852 - 3216837 - g 77 -5.4 -4.67353 | gap 1, overlap 3216838 GCAGTGACCGAAAAA CGCGGCA GCC TGC-GCG CATGGACCATCCTGC TERM 2468 3217054 - 3217042 - g 71 -7.7 -4.07568 | overlap 3217043 TGCGCGCCCCCAAAA TTGCC AGC GGCAA ACCCTTCGCCGCCGC cycK 3216036 - 3218024 + | C-type cytochrome biogenesis membrane protein dsbE 3218021 - 3218563 + | C-type cytochrome biogenesis protein/thioredoxin cycL 3218563 - 3219054 + | C-type cytochrome biogenesis protein TERM 2469 3219404 - 3219382 - g 71 -7.6 -4.15565 | TGCAGCAGGCCAAAA GGGACGAGCA CAA CGATCGCCCC GCCGACGCGCGTGAG XOO3012 3219048 - 3219758 + | hypothetical protein TERM 2470 3221321 - 3221278 - g 80 -8.8 -4.45068 | gap 1, opp_overlap 3221279 3221289, overlap 3221279 3221280 ATCGCCAACAATAAA GGCGGCAAGCAGGCGCTGGAG ACG CTGCAGCGGCTG-TTGCCGGT GCTGTGCCAGGCCCA TERM 2471 3221320 - 3221279 - g 71 -12.3 -3.26318 | gap 1, opp_overlap 3221279 3221289, overlap 3221278 3221280 TCGCCAACAATAAAG GCGGCAAGCAGGCGCTGGAG ACG CTGCAGCGGCTG-TTGCCGG TGCTGTGCCAGGCCC TERM 2472 3221319 - 3221280 - g 77 -15.8 -2.55309 | gap 1, opp_overlap 3221279 3221289, overlap 3221279 3221278 CGCCAACAATAAAGG CGGCAAGCAGGCGCTGGAG ACG CTGCAGCGGCTG-TTGCCG GTGCTGTGCCAGGCC TERM 2473 3223531 - 3223480 - g 81 -11.7 -4.13945 | gap 3 AGCTGGAGGGTAAAA CGCCCG-CGTACCAGGAT-CGGG-GG CGG CCTCCCGGATCCTGGTACGCCCATCG CTGCCGACCTGGCAG pthA2 3219883 - 3223686 + | avirulence protein TERM 2474 3224187 - 3224202 + F 100 -11.8 -4.67038 | AGCGCGTAGACCTGA CCGGCC CTTG GGCCGG TTTTGGTTTTCAGGG TERM 2475 3226235 - 3226190 - g 81 -11.1 -3.95324 | gap 1, opp_overlap 3226192 3226202 CATCGCCAACAATAA CGGCGGCAAGCAGGCGCTGGAG ACG CTGCAGCGGCTG-TTGCCGGTG CTGTGCCAGGACCAT TERM 2476 3229165 - 3229195 + G 95 -7.4 -5.00616 | overlap 3229160 3229172 3229175 CGTCCCATCGCGTTC CCGACCTCGCGCAC GTG GTTCGCGTGCTTGG TTTTTTCCAGAGCCA TERM 2477 3229175 - 3229191 + G 75 -10.1 -3.93166 | overlap 3229160 3229172 3229165 CGTTCCCGACCTCGC GCACGTG GTT CGCGTGC TTGGTTTTTTCCAGA TERM 2478 3229683 - 3229632 - g 81 -11.7 -4.13945 | gap 3 AGCTGGAGGGTAAAA CGCCCG-CGTACCAGGAT-CGGG-GG CGG CCTCCCGGATCCTGGTACGCCCATCG CTGCCGACCTGGCAG XOO3014 3224466 - 3229838 + | avirulence protein TERM 2479 3230339 - 3230354 + F 100 -11.8 -4.67038 | AGCGCGTAGACCTGA CCGGCC CTTG GGCCGG TTTTGGTTTTCAGGG TERM 2480 3232387 - 3232342 - g 81 -11.1 -3.95324 | gap 1, opp_overlap 3232344 3232354 CATCGCCAACAATAA CGGCGGCAAGCAGGCGCTGGAG ACG CTGCAGCGGCTG-TTGCCGGTG CTGTGCCAGGACCAT TERM 2481 3233784 - 3233814 + G 95 -7.4 -5.00616 | overlap 3233779 3233791 3233794 CGTCCCATCGCGTTC CCGACCTCGCGCAC GTG GTTCGCGTGCTTGG TTTTTTCCAGAGCCA TERM 2482 3233794 - 3233810 + G 75 -10.1 -3.93166 | overlap 3233779 3233791 3233784 CGTTCCCGACCTCGC GCACGTG GTT CGCGTGC TTGGTTTTTTCCAGA TERM 2483 3234302 - 3234251 - g 81 -11.7 -4.13945 | gap 3 AGCTGGAGGGTAAAA CGCCCG-CGTACCAGGAT-CGGG-GG CGG CCTCCCGGATCCTGGTACGCCCATCG CTGCCGACCTGGCAG pthA3 3230618 - 3234457 + | avirulence protein XOO3016 3235530 - 3234937 - | cation/multidrug efflux pump TERM 2484 3235454 - 3235470 + g 83 -2.1 -5.1356 | CCGAGCAGCATCGGC GCCTGTG TGC CAGCGGC TTTTTCTTGATACGA XOO3017 3237010 - 3235520 - | IS1478 transposase TERM 2485 3235638 - 3235627 - G 70 -2.2 -4.61231 | CCATAGGCGCAAAAA GACC CTTC AGTC CCAGCACGCACCATG TERM 2486 3236644 - 3236613 - G 95 -15.1 -4.07687 | ATGGCCGCGCGAAAA CGCCCGACCTGCG TGGCAT CGCAGGGCAGGCG CGGCTCATAGAACGC mexB 3239681 - 3237093 - | multidrug efflux transporter XOO3019 3240850 - 3239738 - | hypothetical protein TERM 2487 3240890 - 3240929 + H 77 -13.8 -3.27498 | opp_overlap 3240893 3240923, overlap 3240892 3240893 3240895 CCGGCATGATGCGCT AAAGACCCTTATGAATCA AAAA TGATTCATAAGGGTCATC TTCATATAACCTGTA TERM 2488 3240892 - 3240927 + H 86 -16.4 -3.20078 | opp_overlap 3240893 3240923, overlap 3240890 3240893 3240895 GGCATGATGCGCTAA AGACCCTTATGAATCA AAAA TGATTCATAAGGGTCA TCTTCATATAACCTG TERM 2489 3240926 - 3240893 - H 100 -19.9 -3.56092 | opp_overlap 3240893 3240892 3240890 3240895, overlap 3240923 GCATGATGCGCTAAA GACCCTTATGAATCA AAAA TGATTCATAAGGGTC ATCTTCATATAACCT TERM 2490 3240893 - 3240926 + H 90 -19.9 -2.51725 | opp_overlap 3240893 3240923, overlap 3240892 3240890 3240895 GCATGATGCGCTAAA GACCCTTATGAATCA AAAA TGATTCATAAGGGTC ATCTTCATATAACCT TERM 2491 3240895 - 3240924 + H 81 -16.7 -2.79321 | opp_overlap 3240893 3240923, overlap 3240893 3240892 3240890 ATGATGCGCTAAAGA CCCTTATGAATCA AAAA TGATTCATAAGGG TCATCTTCATATAAC TERM 2492 3241334 - 3241345 + G 87 -4.4 -5.14563 | overlap 3241327 GGAGTCGTTCCAGGC GCAT CTGG ATGC TTTTTTCCTGCACGG XOO3020 3240975 - 3241553 + | hypothetical protein TERM 2493 3241911 - 3241883 - f 77 -12.6 -3.58726 | gap 1 GCTCGTCAGACAGAA CGGCGATGGA-AT CTGG ATCTCCATCGCCG CACCCCGTTCGTTCC XOO3022 3243039 - 3245126 + | putative type III effector HolPsyAE TERM 2494 3248690 - 3248648 - f 88 -17.1 -3.05384 | gap 2 CGGGGTGTCACTGAA GGCCATGCCGCTGCCC--GCC GCG GGCCAGGGCAGCGAGATGGCC GTCGACCGATTGCCG TERM 2495 3249927 - 3249911 - f 70 -7.9 -4.05004 | opp_overlap 3249910, overlap 3249921 GTATCACAACAAGAA GGCCCAG CAA CTGGGGC CGTTGCGTGAGAACC XOO3026 3250458 - 3250799 + | IS1404 transposase XOO3027 3250793 - 3251320 + | IS1404 transposase XOO3028 3252068 - 3251283 - | putative transposase XOO3029 3252116 - 3252754 + | Tn5044 transposase TERM 2496 3253484 - 3253467 - g 70 -14.1 -2.56914 | opp_overlap 3253467, overlap 3253463 GATTGCATGAACTGA CGGCGCG GATC CGCGCCG TGTTGCGCCGCCATA TERM 2497 3253467 - 3253484 + G 75 -14.1 -3.01924 | opp_overlap 3253467 3253463 GATTGCATGAACTGA CGGCGCG GATC CGCGCCG TGTTGCGCCGCCATA XOO3030 3253076 - 3253855 + | VirG-like two component response regulator TERM 2498 3254148 - 3254193 + G 72 -13.2 -3.05384 | gap 2, opp_overlap 3254142 GTCCAGCAACGGTGC CGCTGCCGATGCGACGACCCGG ACGC CCGGG-CG-CGCGCCGCCGGCG TTCAATACACCGACC XOO3031 3253852 - 3254844 + | cytochrome C peroxidase TERM 2499 3254860 - 3254886 + G 79 -5.8 -4.70772 | overlap 3254883 GGTGGGCGACGATCC TCAGCGCCGT GCTGCTG GCGGGGCTGA TTTTCTTCAGTCTGT TERM 2500 3255534 - 3255510 - g 72 -2.8 -4.60041 | gap 1, overlap 3255512 3255515 ACGTATCTGCAAAAA CAGCATGCCTG CCAG CAGGC-CACCG CGCGCCAGGTCCGCT virA 3254841 - 3257300 + | VirA-like protein XOO3033 3257414 - 3258394 + | hypothetical protein XOO3034 3258391 - 3259431 + | hypothetical protein XOO3035 3262830 - 3259927 - | serine/threonine kinase TERM 2501 3261822 - 3261870 + g 73 -12.4 -3.33696 | gap 2 GCCGGCGGCTCAGCG TCGGCAGCGC-TGC-CACGCGCAG CTG CTGCGCCTGCGCCTGCGTCGCCGA TTGCTTGGCAAAGGG ptc1 3263549 - 3262827 - | phosphoprotein phosphatase XOO3037 3264199 - 3263546 - | hypothetical protein XOO3038 3267648 - 3264190 - | hypothetical protein TERM 2502 3266117 - 3266067 - G 80 -14.7 -3.09516 | gap 2, overlap 3266052 GTCGCGACCACGGAA TCGACGCGCCCGGCGGCAGCGCCGC ATC GCG-CGCCTGCGCC-AACGCGTCGA AACGCTGCAAGGCTT TERM 2503 3267051 - 3267028 - G 73 -9.6 -3.88291 | gap 1 CAGCAGGTCCAGAAA GCC-ATGCCAG GCA CCGGCATCGGC GATGGCGTCCGAATC XOO3039 3268968 - 3267652 - | hypothetical protein TERM 2504 3268158 - 3268178 + g 71 -13.3 -3.01791 | TGCGCGCCAGCTGCG CGCTGATCG GCG CGGTCAGCG TATTGAGGCGCGCAT TERM 2505 3269623 - 3269668 + r 70 -11.8 -3.16564 | gap 2 CGATTTCCGCCACGC CGC-GACGGTCGCT-GCCGGCC ACGC GGTCGGCCAGCGCCTGGCCGCG TTGATGCAATAGCCC TERM 2506 3270121 - 3270086 - R 79 -8.8 -4.27584 | overlap 3270104 ATCGGGAATGGAAAA CGGCGTGCCATCGG GAAAGCAG CCGCGGGCGCGCCG GATGCCGAGCTTGCC TERM 2507 3271142 - 3271123 - R 73 -11.4 -3.65812 | gap 1, overlap 3271124 GCTCGGGCAACACAA CGCCGCCGG CAG CCGGCG-CG GCCACGGGTGCACGG XOO3042 3272289 - 3271738 - | hypothetical protein XOO3043 3274334 - 3272286 - | hypothetical protein TERM 2508 3273609 - 3273637 + g 73 -9.6 -3.87815 | gap 1, overlap 3273610 GTCCTTCATCCGGCT GCCCTT-CTGCCC GGGC GGGCAGTAAGGGA TTTGTGCGAATGGCG TERM 2509 3273610 - 3273636 + g 71 -13.1 -2.92475 | gap 1, overlap 3273609 TCCTTCATCCGGCTG CCCTT-CTGCCC GGGC GGGCAGTAAGGG ATTTGTGCGAATGGC XOO3044 3275272 - 3275021 - | IS1479 transposase TERM 2510 3276134 - 3276122 - R 93 -9.1 -4.68645 | TATGTAAAATCAAAA CCCAG CTC CTGGG CCAGCGCCTCCATAT clpB 3279377 - 3276579 - | ClpB TERM 2511 3277119 - 3277130 + gr 73 -3.6 -4.67904 | overlap 3277125 GAACAGTTCGTGCAC GTCC GGGT GGGC TTTTTCCACTTCGTC TERM 2512 3279135 - 3279109 - GR 75 -3.7 -4.67353 | gap 2, opp_overlap 3279121, overlap 3279110 GCATCCAGCGAAAAA CGGCGCACGATGC GGT GCAA-GT-CGCCG TCTTGCGCCTGCAGC XOO3046 3280357 - 3279317 - | hypothetical protein XOO3047 3282168 - 3280291 - | hypothetical protein XOO3048 3282675 - 3282172 - | hypothetical protein XOO3049 3283496 - 3282663 - | hypothetical protein TERM 2513 3283080 - 3283057 - G 87 -14.6 -3.61178 | opp_overlap 3283058 GCCAGCCAGTCGAAA CGCCGGCCAT CGAT ATGGCCAGCG ATGGCATCGGCTTGC XOO3050 3284035 - 3283532 - | hypothetical protein XOO3051 3285706 - 3284135 - | hypothetical protein XOO3052 3286337 - 3285642 - | hypothetical protein TERM 2514 3286435 - 3286416 - R 71 -9.2 -3.74693 | overlap 3286431 GCGTATTGCATCAAA CCGCGCGA GAAA CCACGCGG CCACGCATTCGTTTA XOO3053 3287311 - 3286670 - | hypothetical protein XOO3054 3288475 - 3287507 - | putative transposase TERM 2515 3287776 - 3287765 - G 76 -2.2 -4.8622 | overlap 3287766 GGCGGCAATGAAAAA TGCA GCCT CGCA GCTCTGCAACTCGTC XOO3056 3288624 - 3289262 + | transposase XOO3060 3291826 - 3290771 - | hypothetical protein XOO3061 3292588 - 3291851 - | hypothetical protein TERM 2516 3291979 - 3291967 - G 72 -3.3 -4.63527 | opp_overlap 3291968, overlap 3291968 CTAGTAGCGTAAAAA TTGGC TCG GCCAT TTCGATAAATGGGGT XOO3062 3295672 - 3292619 - | hypothetical protein TERM 2517 3293737 - 3293750 + g 70 -5.9 -4.21827 | overlap 3293729 GGTCCGTGGCGGTGA GCGGG GCCG CCTGC TTTTGCGCTGTTTCG TERM 2518 3295079 - 3295034 - G 72 -8.4 -4.09243 | opp_overlap 3295068, overlap 3295021 CAGATGCTCGGAAAA CATCACCC-ACACCGTGCCGCA CAGA TGCGG-ATAGCGCAGGGTGATG AACTCCATGCGCTCG TERM 2519 3295623 - 3295613 - G 80 -4.6 -4.82901 | CGGTGTCGATAAAAA CCGG GGC CCAG ATGCACGGCCTGCCA XOO3063 3296038 - 3295691 - | IS1404 transposase TERM 2520 3296740 - 3296751 + G 76 -2.2 -4.8622 | overlap 3296738 GACGAGTTGCAGAGC TGCG AGGC TGCA TTTTTCATTGCCGCC XOO3064 3296041 - 3297009 + | putative transposase XOO3065 3298992 - 3297271 - | hypothetical protein TERM 2521 3298692 - 3298710 + g 72 -6.7 -4.21141 | gap 1, overlap 3298688 3298692 TGAAGGTCATGCGAA CCC-GCGA TTCG TCGCCGGG TTTGGTTTCTTCCGG XOO3066 3299743 - 3299108 - | hypothetical protein phhB 3299706 - 3300152 + | pterin-4-alpha-carbinolamine dehydratase XOO3068 3300149 - 3300571 + | hypothetical protein XOO3071 3301423 - 3303246 + | hypothetical protein TERM 2522 3303273 - 3303234 - T 76 -13.6 -3.20307 | overlap 3303232 3303242 GCAATATCACGAACA CCACCATAGCTGAGCCAG CACG CTGACGCAGCCACGATGG CTGCGTCAGCGGCCA TERM 2523 3303300 - 3303242 - T 74 -13.4 -2.867 | gap 4, overlap 3303234 3303232 ACGAACACCACCATA GCTGAGCCAGC---A-CGCTGACGCAGCCA CGA TGGCTGCGTCAGCGGCCAAGCTGGTCCAGC GCTTCGGCCAGTTCG rluC 3304265 - 3303279 - | pseudouridylate synthase TERM 2524 3304255 - 3304272 + g 79 -6.9 -4.46073 | GGCTTCGGGGGCTGG GGGTCGG TCAT CCGGCTC TTTATTCTGTTACAC TERM 2525 3305639 - 3305613 - g 81 -9.5 -4.23213 | gap 1, overlap 3305609 GCGACATCGAAGAAA CCGCGTTCCAGA CCAA CCTGGAA-GCGG CCGAAGAAGTCGCAC TERM 2526 3305983 - 3305965 - g 73 -5.9 -4.45544 | CGCGATGAAGGAAAA CACCGGC CAGGT GCTGGTG CAGGCGCCAGTGGAA TERM 2527 3306040 - 3306025 - g 88 -10.4 -4.4078 | CCTGCTCAACGAAAA GCGCAG CGCG CTGCGC GAGATCGAACAACGT rne 3304667 - 3308365 + | ribonuclease E TERM 2528 3308474 - 3308451 - T 100 -18.2 -3.79251 | opp_overlap 3308451 CATGGCAGCATCAAA CACAGCGGCC TTCG GGCCGCTGTG TTTTTATGACGCGCG TERM 2529 3308451 - 3308474 + T 100 -18.2 -4.82901 | opp_overlap 3308451 CATGGCAGCATCAAA CACAGCGGCC TTCG GGCCGCTGTG TTTTTATGACGCGCG TERM 2530 3308688 - 3308654 - T 76 -8.5 -4.24342 | gap 1, overlap 3308655 3308672 GGTGGCAGCAAGAAA TCTCTGCCG-AGCCGG AAAT CCGGCGACGGCAGAAC CTGCCGGCGCATAAC TERM 2531 3308687 - 3308655 - T 70 -12 -3.14284 | gap 1, overlap 3308654 3308672 GTGGCAGCAAGAAAT CTCTGCCG-AGCCGG AAAT CCGGCGACGGCAGAA CCTGCCGGCGCATAA TERM 2532 3309327 - 3309358 + T 100 -2.9 -5.86061 | overlap 3309326 TTTTGGTGTTCCATC CGCCCCGCGATTT CCCGAT GGATTGTGGGCCG TTTTTTTTAATGCGC gacA 3310506 - 3309787 - | LuxR/UhpA family transcriptional regulator TERM 2533 3310316 - 3310328 + g 75 -10.5 -3.91897 | CGAATTTGCGGCAAT GCGGC TTC GCCGC TTTCTGCCTCGCCGA XOO3078 3311351 - 3310656 - | hypothetical protein XOO3079 3312020 - 3311517 - | hypothetical protein TERM 2534 3312160 - 3312183 + G 70 -7.4 -3.97947 | gap 1 AAGTTCGACAGCTCG CTGGATCGCGC CGA GC-CGTTCCAG TTTGTGCTGGGTGGC fkpA 3312049 - 3312372 + | FKBP-type peptidyl-prolyl cis-trans isomerase XOO3081 3312384 - 3313646 + | hypothetical protein vipA 3314922 - 3313630 - | polysaccharide biosynthetic protein TERM 2535 3313709 - 3313686 - Gf 83 -17.4 -2.62616 | TGACGTCGTAGACCA CCGCGCCCGG TTTG CCGAGCGCGG CAATGCGCGCGGCGT TERM 2536 3314006 - 3314035 + gF 70 -9.9 -3.65046 | gap 1, overlap 3314007 GCCAGCATGCCGCAG ACGCGCTCGGCCAC ATG GCGGCCGA-CGCGA TTGTTGACCTGCCGC TERM 2537 3314007 - 3314034 + gF 72 -13.4 -2.78813 | gap 1, overlap 3314006 CCAGCATGCCGCAGA CGCGCTCGGCCAC ATG GCGGCCGA-CGCG ATTGTTGACCTGCCG TERM 2538 3315806 - 3315841 + GH 95 -7.5 -5.00616 | gap 1, overlap 3315805 AGACGTTGCACGATG CCGGCGACG-CGACGC TGGAT GCGTTGTTGACGCTGG TTTTTTCGGCGAAGG XOO3083 3314905 - 3316062 + | phosphopantetheinyl transferase XOO3084 3316108 - 3316815 + | putative ISXo8 transposase XOO3085 3318054 - 3316819 - | transposase TERM 2539 3319298 - 3319258 - R 100 -18.3 -4.30576 | opp_overlap 3319265 3319296, overlap 3319261 TCGCGATGACTAAAA CAACACAGGCGCTAAGCCC TGT GGGCATCGCGCCTGTGTCA AGCGTCACGCAAGAT TERM 2540 3319295 - 3319261 - R 100 -20 -4.27443 | opp_overlap 3319265, overlap 3319258 CGATGACTAAAACAA CACAGGCGCTAAGCCC TGT GGGCATCGCGCCTGTG TCAAGCGTCACGCAA TERM 2541 3319265 - 3319291 + r 74 -13.6 -2.87931 | opp_overlap 3319261 3319258 GACTAAAACAACACA GGCGCTAAGCCC TGT GGGCATCGCGCC TGTGTCAAGCGTCAC TERM 2542 3319346 - 3319322 - R 75 -13.5 -3.06315 | opp_overlap 3319320, overlap 3319313 GCAAGATTTGCAACA GCCGGCACGCC ATA GGCGTGCCGAT CACTGGATTACGCAG XOO3088 3319701 - 3319354 - | hypothetical protein TERM 2543 3319734 - 3319723 - H 84 -2.2 -5.30155 | gap 1, overlap 3319725 GGATGAAGGAAAAAA CG-GC TGC GCTCG CTGCGCAAATCTTGC tnp 3319937 - 3321040 + | transposase TERM 2544 3321625 - 3321614 - T 74 -2.2 -4.8622 | overlap 3321615 GGCGGCAATGAAAAA TGCA GCCT CGCA GCTCTGCAACTCGTC XOO3092 3322327 - 3322112 - | IS1479 transposase TERM 2545 3322648 - 3322685 + H 78 -14.3 -3.05844 | gap 1 TACTACCAGTGCCGG GCGTGCCGGCAT-CAA AACCACC TTGCGTGCCGGCACGC TGTTGCAATCCAGCA XOO3095 3323012 - 3323422 + | putative transposase TERM 2546 3323943 - 3323913 - T 71 -13.2 -3.05384 | opp_overlap 3323897 3323906 GCCGCCGCGATGGAA CGCCAGCGCAGTCG CGT CGTCTGCAATGGCG TTGGCACCTGCATTC XOO3097 3325422 - 3324406 - | transposase TERM 2547 3324537 - 3324521 - G 74 -10.1 -3.70902 | opp_overlap 3324516, overlap 3324522 CGGGTCAGATCGAAA CGGCGGT TGA ACCGCCA CATCGTCTCTGCCAG TERM 2548 3325270 - 3325255 - G 74 -4.6 -4.55697 | ACGCGGACAAACAAA GCCCTG TGGC CAGCGC GAGATCTCCAACGCC nasT 3326438 - 3326247 - | histidine kinase/response regulator hybrid protein cysG 3326579 - 3327556 + | siroheme synthase TERM 2549 3327859 - 3327826 - g 88 -8.7 -4.65895 | overlap 3327828 TGCCTGAGCGAAAAA GTCCCCAGCCAGGCG CACT CACCCGCCTGGAGTC GAGCACGTCATCTCG pedG 3327766 - 3328155 + | putative FAD-dependent monooxygenase XOO3104 3329263 - 3328757 - | AraC-type DNA-binding domain-containing proteins TERM 2550 3329134 - 3329111 - G 75 -4.4 -4.62069 | CGCGCAGCGGAAAAA GCGCGTGTAG GCCT CCACCGGCGC CGCTTGCGCGAAGGC mobA 3330952 - 3330299 - | molybdopterin guanine dinucleotide synthase moeA 3332159 - 3330906 - | molybdopterin biosynthesis TERM 2551 3331237 - 3331221 - GH 84 -6.5 -4.72272 | CGGCTCGACGAAAAA GCGCAAC CCG GCTGCAC TGGCCATCGGATTAC XOO3107 3332383 - 3332742 + | hypothetical protein TERM 2552 3333401 - 3333416 + G 74 -4.6 -4.55697 | GGCGTTGGAGATCTC GCGCTG GCCA CAGGGC TTTGTTTGTCCGCGT TERM 2553 3334134 - 3334150 + G 74 -10.1 -3.70902 | opp_overlap 3334129, overlap 3334135 CTGGCAGAGACGATG TGGCGGT TCA ACCGCCG TTTCGATCTGACCCG XOO3109 3333249 - 3334265 + | transposase XOO3110 3335034 - 3334486 - | putative ISXo8 transposase XOO3111 3335427 - 3335903 + | putative transposase XOO3112 3338369 - 3336018 - | hypothetical protein TERM 2554 3336328 - 3336294 - G 71 -12.6 -3.18681 | GCTGAAGGCCATGAA GCCGCCGGTACGCACG TCG CGGCCGGGCCGGCGGC GGTAGCTGAGCGAGT TERM 2555 3337127 - 3337111 - G 70 -8 -3.99592 | ACGCAGCACCAGAAA TCGTCG AACGG CGACGA CCAGCCGCGCGCTTC TERM 2556 3337454 - 3337425 - G 80 -4.9 -4.82901 | gap 1, opp_overlap 3337434, overlap 3337426 3337427 GGTGTGCCAGAAAAA GCGCGCTGCGGCAC CGG ATGCAGCATCGC-C GGTGACTTCGTACTC TERM 2557 3339534 - 3339552 + H 76 -8.8 -4.18018 | opp_overlap 3339524 3339522 3339535, overlap 3339535 AAACACCTGCGAGAC ACTGCTGC GTA GCAGCAGG TTTTCGATGGGGCGC TERM 2558 3340739 - 3340712 - H 70 -12 -3.12668 | gap 1 GAGGCGGAGATGTAA GCCCATGTGG-GC CAT GCGCCGCATGGGC GCTCAGGCGGCAACG TERM 2559 3341647 - 3341671 + G 79 -5.7 -4.59773 | opp_overlap 3341650 GCGTATTTTCCCCAA CGACGATTCGG CGC TCAAATCGTTG TTTTTGGCCGTGCGC tnpX1 3340718 - 3341788 + | IS1113 transposase btuB 3342886 - 3341798 - | TonB-dependent receptor TERM 2560 3342667 - 3342637 - G 73 -14 -2.87132 | CCTGTTGCGCAGACA CCGGCGCTGCCG CACCTGC CGACAGCGCCAG CAACAACGCGGTGGC TERM 2561 3342954 - 3342976 + r 70 -9.9 -3.58037 | gap 1 GAAGTGGGTTTCGCA CTGGATGCGC CCGT GCGC-TCCAG TTTCAGCAGTTGGTC TERM 2562 3343256 - 3343217 - R 76 -9.3 -4.10552 | overlap 3343213 TGCGATCAAATCAAA GCACGCG-AGCCGCGACGC GCGC GCATCACGGCGACGC-TGC GACCGGTGCTGCTGC XOO3120 3345587 - 3343242 - | peptidase xsa 3347624 - 3345909 - | xylosidase; arabinosidase XOO3122 3351766 - 3347492 - | hypothetical protein TERM 2563 3350384 - 3350366 - GR 70 -12.4 -3.17194 | opp_overlap 3350369 AGCGGCCCAATCGAA CGACACCG CAT CGGCGTCG TTACCGGTCATCGCT btuB 3355040 - 3352095 - | TonB-dependent receptor XOO3124 3357838 - 3355433 - | hypothetical protein TERM 2564 3356002 - 3355980 - G 81 -4.8 -4.93877 | opp_overlap 3355989, overlap 3355982 CCGTAGGAAATAAAA CCGAGCAG GTCGCGG CTACCCGG CTCCGGCGGCGCGAT TERM 2565 3357676 - 3357705 + g 74 -12.9 -3.29461 | gap 1, opp_overlap 3357676 CCAGCCGGGGAAGCA CTGGCGCAGGCAGC GCC GCTGC-TGCGGCAG TTGTGGCCGGCATTG XOO3125 3358254 - 3359825 + | peptidase XOO3126 3360364 - 3360032 - | hypothetical protein XOO3127 3361263 - 3360673 - | hypothetical protein TERM 2566 3360999 - 3360949 - G 70 -5.8 -4.28254 | opp_overlap 3360979 3360981, overlap 3360950 3360979 3360981 TCCGAATACCGAAAA GCCGACGCCGCCCTGCCCCAGT ACATGAA ACAGCGACGGTGCGGTGGCGGC GCCGAAGCCTGTTTC XOO3128 3361514 - 3361305 - | hypothetical protein TERM 2567 3361406 - 3361449 + g 100 -18.3 -4.11216 | gap 3, overlap 3361408 CGAGCGCCGCCTCGC CG-GCCGGGCCGTGGTCGCGCA CGG TGC-CGACCGCG-CCCGGCTCG TTTTCCACCTGCACC TERM 2568 3361408 - 3361446 + g 93 -19.7 -3.09004 | gap 2, overlap 3361406 AGCGCCGCCTCGCCG GCCGGGCCGTGGTCGCGCA CGG TGC-CGACCGCG-CCCGGC TCGTTTTCCACCTGC XOO3129 3361702 - 3361511 - | hypothetical protein XOO3130 3362045 - 3361758 - | hypothetical protein TERM 2569 3362005 - 3361992 - G 100 -9.5 -4.99861 | opp_overlap 3362002 3362004, overlap 3361994 GACGAACCACAAAAA GCCGG CAAC CCGGC CGCGCCGTTGTGGCT TERM 2570 3362049 - 3362038 - G 76 -5.8 -4.5123 | AATCGAGCAAACAAA CGCA TCAT TGCG CCTCCGACGGCAGGG XOO3131 3364381 - 3362042 - | peptidase TERM 2571 3362691 - 3362658 - G 71 -9.5 -3.80841 | opp_overlap 3362659 3362660 3362662, overlap 3362659 3362662 ATCACCACGATGAAA CCCAGATCGGCCTGC GCCT GCATGCCGATCTGCT TGTCGCCACCGGAGT TERM 2572 3362659 - 3362690 + g 74 -13 -3.28712 | opp_overlap 3362659 3362658 3362662, overlap 3362660 3362662 TCACCACGATGAAAC CCAGATCGGCCTGC GCCT GCATGCCGATCTGC TTGTCGCCACCGGAG TERM 2573 3362660 - 3362689 + g 81 -16.5 -2.57132 | opp_overlap 3362659 3362658 3362662, overlap 3362659 3362662 CACCACGATGAAACC CAGATCGGCCTGC GCCT GCATGCCGATCTG CTTGTCGCCACCGGA TERM 2574 3364036 - 3364025 - G 93 -3.6 -5.45802 | TTTTGAAAAGAAAAA CCGC TCGA ACGG CAGCCGCAGCGGCGC yveA 3365957 - 3364371 - | amino acid permease TERM 2575 3364801 - 3364755 - G 84 -7.2 -4.72272 | gap 1, overlap 3364756 3364757 GCCGCGCACGAAAAA TGGCCGTGGCAACGCCGGCGC ACTGCG GCG-CAACGCCGCCACCGCGA CCGGCGCCACCGCGT XOO3133 3367696 - 3366020 - | hypothetical protein TERM 2576 3366761 - 3366738 - G 72 -8.8 -4.13767 | gap 1, opp_overlap 3366740 GGTTCGATCGCAAAA CGTCGGCGCGG CAG CCG-GCCGATG TAATCGCCCACCTTG TERM 2577 3366887 - 3366924 + g 73 -14.1 -2.82193 | gap 1, opp_overlap 3366883 3366884 3366881, overlap 3366888 CGCCGGAAACACCGC CTGGC-CGGCCGGCGGCT TGA AGCCGCTGGCCGCGATGG TCTGGTCCATCTGCT TERM 2578 3366888 - 3366921 + g 75 -15.3 -2.67143 | gap 1, opp_overlap 3366883 3366884 3366881, overlap 3366887 GCCGGAAACACCGCC TGGCCGGCCGGCGGCT TGA AGCCGCTGGCC-GCGA TGGTCTGGTCCATCT TERM 2579 3367161 - 3367206 + g 73 -9.6 -3.90112 | gap 1, overlap 3367188 ATGGCCCTGACCGCT TGCCGGCGCAGTTG-CGCCTG CACAT CGGCCGGCAGCGTCGCCGGCA TTTGCTTGAACGGCG TERM 2580 3367509 - 3367491 - G 76 -9.6 -4.09685 | overlap 3367508 TCCCAGGCGCGAAAA TGCTGCTG ATC CAGCAACA CCTGCAACTGTTGCC XOO3134 3369715 - 3367883 - | hypothetical protein TERM 2581 3369006 - 3369026 + g 74 -4.6 -4.56597 | gap 1, overlap 3369014 ACATCGCGTTGATCG GC-CGGCAC CGCG GCGCCGCGC TTTTTCAACGGCGAG pepQ 3371062 - 3369833 - | proline dipeptidase XOO3136 3372645 - 3371029 - | ketoglutarate semialdehyde dehydrogenase TERM 2582 3372454 - 3372412 - GR 74 -9.6 -3.86346 | GTAGCTTTCCAGAAA GGCAGCGATGCGCTCGACCG GCG CGGCCACGAGTTCCGCTGCC ACTGCCTGCGCCGCA dapA 3373764 - 3372856 - | dihydrodipicolinate synthetase XOO3138 3375095 - 3373761 - | oxidoreductase TERM 2583 3374128 - 3374082 - GR 74 -11.4 -3.64682 | gap 1, overlap 3374086 CAGCAAATCGGCAAA CGCACGCGCCGC-GCGCCGGC GTGGCT GCAGGCGCAGCGCAGCGTCCG GGGCGTCGGCGGCCA soxA 3375312 - 3375067 - | sarcosine oxidase alpha subunit XOO3140 3376571 - 3375309 - | D-amino acid oxidase XOO3141 3377596 - 3376571 - | hypothetical protein XOO3142 3377655 - 3378383 + | transcriptional regulator TERM 2584 3379286 - 3379270 - g 76 -13.7 -3.10715 | GCCAGCACGACGCAA TGCCGGC TGC GCCGGCA GGCAAACCCGGCTGG ftsY 3378399 - 3380204 + | cell division protein TERM 2585 3380568 - 3380538 - f 83 -7.5 -4.63218 | gap 2 GCGCGGCTAACAAAA CGACTGCGCAGCCGC CAG GCGG--GCGCGGCCG GTGCTCGGAACGGCA TERM 2586 3381204 - 3381190 - g 88 -8.6 -4.65895 | CCGGTGATCGAAAAA CAGTTG TGG CAACTG GCCGCTGCGCATGTC mutY 3380683 - 3381756 + | A/G-specific adenine glycosylase XOO3145 3381759 - 3382058 + | hypothetical protein fixL 3384044 - 3382758 - | sensor histidine kinase XOO3148 3384922 - 3385701 + | IS1478 transposase XOO3149 3385741 - 3386382 + | IS1478 transposase TERM 2587 3386416 - 3386431 + GF 71 -10.4 -3.67597 | ACTATTTGGCCAGGT CTGGCC CGCT GGCCAG TTGTTGGCTGAGGCC XOO3150 3386372 - 3386836 + | hypothetical protein XOO3151 3386809 - 3386934 + | hypothetical protein XOO3152 3387460 - 3386951 - | hypothetical protein XOO3153 3388127 - 3387885 - | hypothetical protein TERM 2588 3388299 - 3388289 - R 83 -6.8 -4.90906 | overlap 3388291 GCACAACACGAAAAA TGCG CAC CGCA AGTGCAATGGGGCGA XOO3154 3390066 - 3389143 - | hypothetical protein XOO3155 3390881 - 3390063 - | hypothetical protein XOO3156 3390997 - 3391317 + | hypothetical protein XOO3157 3392300 - 3391824 - | putative transposase XOO3158 3392637 - 3392266 - | putative transposase XOO3160 3393812 - 3392844 - | putative transposase TERM 2589 3395025 - 3395002 - H 100 -18.2 -4.27316 | GTCTGGAATTGAAAA CGCCCAACCG AGAA CGGTTGGGCG CTGAATAGTGGTGGC TERM 2590 3395474 - 3395462 - g 93 -5.5 -5.24129 | TCGTTCCAGAAAAAA TGCCG CAG CGACA TCACCGCCAGCTACA blc 3395240 - 3395842 + | outer membrane lipoprotein Blc TERM 2591 3396105 - 3396072 - f 81 -2.5 -5.14563 | overlap 3396073 CCCTTGACGAAAAAA TGC-GGATGACTGGC CGCGAT GCCGGT-ATCCAGCA CCGCCCAGCCGATTT TERM 2592 3397467 - 3397504 + F 100 -9.7 -5.04175 | gap 1, overlap 3397468 GCGGGCTCTTGTGCC TCGGC-CTGCTGCGCGCG CCT TGCACGCGGCCGCGCCGG TTTTTCTGTGCTTGC TERM 2593 3397468 - 3397503 + F 73 -11 -3.61421 | gap 1, overlap 3397467 CGGGCTCTTGTGCCT CGGC-CTGCTGCGCGCG CCT TGCACGCGGCCGCGCCG GTTTTTCTGTGCTTG XOO3163 3398390 - 3398986 + | putative transposase XOO3164 3398983 - 3399426 + | putative transposase tISRso5 3399673 - 3400830 + | ISRSO5-transposase protein gumN 3401928 - 3400948 - | GumN XOO3167 3402499 - 3402038 - | hypothetical protein gumM 3403328 - 3402534 - | GumM gumL 3404127 - 3403333 - | GumL TERM 2594 3404179 - 3404153 - R 100 -7.3 -5.27335 | gap 1, overlap 3404168 TCTCTTAAAGAAAAA TGTGCGC-CGCA TCAA TGCGAGAGCACA GCCTCTGACGAGGCG gumK 3405360 - 3404164 - | glucuronosyltransferase GumK TERM 2595 3405240 - 3405223 - G 100 -9.1 -4.87665 | GCGCAGCGAGAAAAA CCGCGTG GTTC CACGCAG CGCCAGTTGATCGGT gumJ 3406939 - 3405425 - | GumJ gumI 3407985 - 3406936 - | GumI TERM 2596 3407045 - 3407059 + g 70 -11.4 -3.30124 | GGTACCGGCCCGCGC GGTGCG GCG CGCACC TTGTCGAGCATGCCG TERM 2597 3407854 - 3407840 - G 100 -2.7 -5.81412 | overlap 3407819 CGCATCGAAAAAAAA CGCGG ATGCA CTGCG GCGGGCAACGCGTCG gumH 3409124 - 3407982 - | GumH TERM 2598 3408341 - 3408315 - G 81 -2.8 -5.04222 | opp_overlap 3408315, overlap 3408303 3408309 CAAGCAAACGAAAAA CTGCGCTTGCTG CAT CAGTGCACGCAG TTGCTCCTGCGAGGG TERM 2599 3408777 - 3408765 - G 74 -4.7 -4.56775 | overlap 3408767 AGCGGTGTGGAAAAA CCCGC CAT GCGTG GACACCACCATCGGC gumG 3410268 - 3409192 - | GumG gumF 3411376 - 3410285 - | GumF TERM 2600 3410805 - 3410791 - G 89 -2.1 -5.42259 | gap 1 CCAGGCCGAAAAAAA TCC-GC ACGT GCTGGA CTGGGAACCAGTTCA TERM 2601 3410938 - 3410927 - G 79 -5.8 -4.60487 | overlap 3410928 3410930 CATGACGGGCAAAAA CCAC AGCG GTGG CTGCACATACAGGTC TERM 2602 3411243 - 3411213 - G 76 -6.1 -4.48299 | gap 1, overlap 3411209 3411215 CTATAGGCAAACAAA GTCATGCCATGTGG GACG CC-CTTGGCATGGC AGAACACCACCAACA gumE 3412674 - 3411373 - | GumE TERM 2603 3411890 - 3411871 - G 78 -2.8 -4.89233 | gap 1 CAGGAACACCAAAAA GGCCAG-TC GTT GATCCAGCC GTTTCAACAGCGGCG TERM 2604 3412429 - 3412412 - G 87 -4.1 -5.15634 | gap 1, overlap 3412420 3412422 CAGTTCACCAAAAAA CGCAC-GA ACA TCAGCGCG ACGATGAAGCCGAGT TERM 2605 3412708 - 3412671 - G 78 -15.8 -2.73364 | overlap 3412693 3412695 CTCTCATTCGAATCA GCAT-GCAGCCGCCTGCT TGAA AG-AGGCGGCTGCGATGC AGCCGCCCGTGGCGC TERM 2606 3412716 - 3412693 - R 83 -14.6 -3.53012 | gap 1, overlap 3412671 3412695 GCCGCCTGCTTGAAA GAGGCGGCTGC GAT GCAGCCGCC-C GTGGCGCCGAACGCG TERM 2607 3412715 - 3412695 - R 93 -18.3 -3.34398 | overlap 3412671 3412693 CGCCTGCTTGAAAGA GGCGGCTGC GAT GCAGCCGCC CGTGGCGCCGAACGC gumD 3414277 - 3412757 - | GumD TERM 2608 3413820 - 3413780 - G 88 -8.7 -4.59109 | overlap 3413784 CAGATGGTTCAAAAA GCCACGCAGCGCCGTGCGC GCG GCGACCAGCGATGCCAGGC CACCGACGAACCACA gumC 3415936 - 3414455 - | GumC gumB 3416574 - 3415876 - | GumB TERM 2609 3417008 - 3417042 + r 71 -5.7 -4.26076 | opp_overlap 3417014, overlap 3417010 3417014 ATATTGCGCCGCAAC AAAAAAGCCCATGAC AGACC GTCATGGGCTTGATG TTTTGGTCGGGGTAG TERM 2610 3417036 - 3417014 - R 100 -14.2 -5.4505 | opp_overlap 3417014 3417010 3417008 CGCCGCAACAAAAAA GCCCATGACA GAC CGTCATGGGC TTGATGTTTTGGTCG TERM 2611 3417014 - 3417036 + r 81 -13.5 -3.55966 | opp_overlap 3417014, overlap 3417010 3417008 CGCCGCAACAAAAAA GCCCATGAC AGACC GTCATGGGC TTGATGTTTTGGTCG XOO3180 3417539 - 3417183 - | hypothetical protein ihfA 3417819 - 3417520 - | integration host factor subunit alpha pheT 3420219 - 3417841 - | phenylalanyl-tRNA synthetase subunit beta TERM 2612 3419242 - 3419230 - G 72 -3.4 -4.62069 | TGCCGACTCTAAAAA CACA TTGCG TGTG GTCTCGGTGACGCGC TERM 2613 3420377 - 3420350 - R 76 -5.6 -4.64334 | gap 1, overlap 3420351 AACTGCCGAAGAAAA CGCACATCGTTCT CGA AGAACG-CGCGCA GATCGTTGACGCCGT pheS 3421323 - 3420328 - | phenylalanyl-tRNA synthetase subunit alpha TERM 2614 3421462 - 3421427 - R 76 -5.5 -4.58395 | gap 2, opp_overlap 3421459, overlap 3421434 GCGACTTCGCAAAAA CGCAAAAGGGGAAGGAC TCGC GCCCTTCCCC--CTGCA TCTCTGCGTTTCACC TERM 2615 3421457 - 3421434 - R 100 -14.6 -4.4874 | overlap 3421427 CGCAAAAACGCAAAA GGGGAAGGAC TCGC GCCCTTCCCC CTGCATCTCTGCGTT rplT 3421937 - 3421578 - | 50S ribosomal protein L20 rpmI 3422145 - 3421948 - | 50S ribosomal protein L35 TERM 2616 3422375 - 3422351 - R 84 -15.7 -3.35597 | overlap 3422354 3422358 TTGATCTTGCAAACA CAACGGACCCC GTC GGGGCCCGTCG GAGCGCAGAAGCAAA TERM 2617 3422372 - 3422354 - R 84 -13.8 -3.81755 | overlap 3422351 3422358 ATCTTGCAAACACAA CGGACCCC GTC GGGGCCCG TCGGAGCGCAGAAGC infC 3422873 - 3422394 - | translation initiation factor IF-3 TERM 2618 3422682 - 3422694 + g 83 -6.2 -4.93296 | CTTGGTCTTCTTCTT GGCC TCGTT GGCC TTTTTCTGCTGCTCG thrS 3425000 - 3422985 - | threonyl-tRNA synthetase TERM 2619 3423068 - 3423081 + g 71 -3.7 -4.48987 | overlap 3423065 3423069 CCGAACGCGTCCGCA CGGCG ACCG CGCCA TTTTCCTTCTCACGG XOO3188 3425306 - 3425398 + | maltose transport gene repressor TERM 2620 3425747 - 3425720 - g 78 -14.2 -3.26444 | overlap 3425718 3425716 3425721 3425723 TTTCCGAAGAACAGA TCATCGGCTTCC TGCG GGAAGCCGATGC GGGCATAGCGATCAG TERM 2621 3425746 - 3425721 - g 83 -17.7 -2.55545 | overlap 3425718 3425720 3425716 3425723 TTCCGAAGAACAGAT CATCGGCTTCC TGCG GGAAGCCGATG CGGGCATAGCGATCA TERM 2622 3425744 - 3425723 - g 77 -14.5 -2.81223 | overlap 3425721 3425718 3425720 3425716 CCGAAGAACAGATCA TCGGCTTCC TGCG GGAAGCCGA TGCGGGCATAGCGAT XOO3190 3425692 - 3425907 + | IS1404 transposase TERM 2623 3426127 - 3426074 - gf 84 -16.2 -3.01712 | gap 2, opp_overlap 3426088 3426117 TTGCTCGCGCGAAGA CCGCAATGGCGAACTGCGCGAACGCA TCTG TGCGTTGGCGCA--TCGCCATCGCCG CTATGGCGTCTGGTG XOO3189 3425454 - 3426143 + | IS1404 transposase XOO3191 3426140 - 3426457 + | IS1389 transposase XOO3192 3426791 - 3426570 - | IS1478 transposase TERM 2624 3426761 - 3426749 - G 70 -4.8 -4.42238 | GTAGCGTAACGAAAA CTGG CAATT CCAG TACACCGAAAACGCA uvrB 3429203 - 3427182 - | excinuclease ABC subunit B fimT 3429342 - 3429884 + | fimbrial biogenesis protein TERM 2625 3429932 - 3429888 - T 83 -16 -2.82742 | gap 1, opp_overlap 3429890 3429901, overlap 3429901 ATGGCCCGATAAGCA GGCG-AACAAAAAAGCCGCGA CACG TCGCGGCTTTTTTGTTTCATC TTGGCGCCCGAAGTT TERM 2626 3429890 - 3429930 + T 78 -15 -3.01712 | gap 1, opp_overlap 3429888 3429901, overlap 3429901 GGCCCGATAAGCAGG CG-AACAAAAAAGCCGCGA CACG TCGCGGCTTTTTTGTTTCA TCTTGGCGCCCGAAG TERM 2627 3429918 - 3429901 - T 100 -12.7 -5.46657 | opp_overlap 3429890 3429901, overlap 3429888 CAGGCGAACAAAAAA GCCGCGA CACG TCGCGGC TTTTTTGTTTCATCT TERM 2628 3429901 - 3429918 + T 100 -12.7 -5.69793 | opp_overlap 3429901 3429888, overlap 3429890 CAGGCGAACAAAAAA GCCGCGA CACG TCGCGGC TTTTTTGTTTCATCT pilE1 3430518 - 3430063 - | type IV pilin pilY1 3434049 - 3430525 - | PilY1 TERM 2629 3432481 - 3432469 - G 74 -10.5 -3.75665 | overlap 3432470 CCAGAGCGGAGTAAA GCGCG CTT CGCGC GTATCCGGATCAACC XOO3197 3435141 - 3434053 - | putative transposase TERM 2630 3434823 - 3434787 - G 80 -15.3 -3.05844 | gap 1 TGCTGGATTGCAACA GCGTGCCGGCACGCAA GGTGGT TTG-ATGCCGGCACGC CCGGCACTGGTAGTA TERM 2631 3435843 - 3435854 + G 76 -2.2 -4.8622 | overlap 3435841 GACGAGTTGCAGAGC TGCG AGGC TGCA TTTTTCATTGCCGCC XOO3198 3435144 - 3436112 + | putative transposase pilX 3437214 - 3436705 - | PilX XOO3200 3438384 - 3437218 - | hypothetical protein TERM 2632 3438391 - 3438374 - G 78 -4 -4.82901 | CGTTGGTTAGAAAAA CGCCGC GTCATA GCTGCG ATACCAGGGTGAAGG pilV 3438854 - 3438381 - | pre-pilin leader sequence fimT 3439366 - 3438851 - | pre-pilin like leader sequence XOO3203 3440921 - 3439536 - | hypothetical protein TERM 2633 3440997 - 3440978 - R 100 -16.4 -5.18371 | opp_overlap 3440978 CCGCACAAAAGAAAA CGGCCGGG AGAC CCCGGCCG TTTGTGCAAACTTCG TERM 2634 3440978 - 3440997 + r 95 -16.4 -3.87869 | opp_overlap 3440978 CCGCACAAAAGAAAA CGGCCGGG AGAC CCCGGCCG TTTGTGCAAACTTCG oar 3444222 - 3441028 - | Oar protein TERM 2635 3444914 - 3444957 + r 78 -6.7 -4.63932 | gap 2 AAGGGTGGTGCCTGC CGATTCCG-AG-CGCCGGCCG CGCC CGCCTGGCGGCTACGCAGTCG TTTTGTTAGCGGCTC XOO3205 3445642 - 3444980 - | hypothetical protein XOO3206 3446319 - 3445576 - | short chain dehydrogenase TERM 2636 3445915 - 3445904 - GR 70 -5.8 -4.20516 | overlap 3445905 TGCTGACGCAATAAA GGCA GGCA TGCC TGGGTCAGCCACGCG TERM 2637 3446242 - 3446196 - GR 75 -14.3 -2.80699 | gap 1, overlap 3446191 GGCCAAGCAAGACCA CCGTGGCGCCTGCGGCCGCGCA TGCC TGTGCCGCGGC-GGCGCCAAGG CCACCGGCAGCGCCG XOO3207 3446636 - 3446316 - | hypothetical protein sodB 3446758 - 3447336 + | iron superoxide dismutase TERM 2638 3447343 - 3447400 + T 73 -8.1 -4.07568 | gap 4, overlap 3447327 CTGGGCTGACCTGAC CGCTC---AGCTTGCGTCAGCAGATGGGC ACTG GTTCATCTGCTGACG-AAGTTACCGAGCG TTTTCGAACCCGCAC TERM 2639 3447459 - 3447483 + T 82 -14.3 -3.33696 | overlap 3447460 ACAGCGCTGGATCAC CGCTGATGCGC TAC GCGCATCAGCC TTCGTTCAAGCGCGC TERM 2640 3447460 - 3447482 + T 86 -17.8 -2.60075 | overlap 3447459 CAGCGCTGGATCACC GCTGATGCGC TAC GCGCATCAGC CTTCGTTCAAGCGCG purK 3448623 - 3447478 - | phosphoribosylaminoimidazole carboxylase ATPase subunit purE 3449123 - 3448620 - | phosphoribosylaminoimidazole carboxylase catalytic subunit XOO3211 3449182 - 3449451 + | hypothetical protein nadC 3449448 - 3450335 + | nicotinate-nucleotide pyrophosphorylase TERM 2641 3450348 - 3450376 + F 71 -5.8 -4.25256 | overlap 3450349 TGATTTCACGCGTGC GCGCAGCCGGCT CTGGC AGCCTGCCGCGA TTGTTTTCGTGCAGG TERM 2642 3450723 - 3450770 + G 75 -3.2 -4.72272 | gap 1, overlap 3450724 CCCGGCGCTTCCAGC TGCGCGGCACTGGATGGTACGCG CTA CACC-GCCAGCGACTGCCGCGCG TTTTTGATCGACAAC XOO3213 3450471 - 3451439 + | hypothetical protein TERM 2643 3451783 - 3451744 - T 81 -16.6 -2.72558 | opp_overlap 3451756, overlap 3451746 3451749 3451756 AGAAGGGGTCAAGCA CACAACAAAAAAGCAGGC CGAA GCCCGCTTTTCCGTCGTG CATCACACGCGATGC TERM 2644 3451781 - 3451746 - T 74 -13.4 -2.90571 | opp_overlap 3451756, overlap 3451744 3451749 3451756 AAGGGGTCAAGCACA CAACAAAAAAGCAGGC CGAA GCCCGCTTTTCCGTCG TGCATCACACGCGAT TERM 2645 3451778 - 3451749 - T 73 -11.5 -3.59946 | opp_overlap 3451756, overlap 3451746 3451744 3451756 GGGTCAAGCACACAA CAAAAAAGCAGGC CGAA GCCCGCTTTTCCG TCGTGCATCACACGC TERM 2646 3451771 - 3451756 - T 100 -8.2 -5.60689 | opp_overlap 3451756, overlap 3451749 3451746 3451744 GCACACAACAAAAAA GCAGGC CGAA GCCCGC TTTTCCGTCGTGCAT pnp 3453928 - 3451814 - | polynucleotide phosphorylase/polyadenylase TERM 2647 3454080 - 3454057 - R 100 -19.6 -5.13722 | TTGACCAAAACAAAA CCGCGGCGCA TCGA TGCGCCGCGG CGGTAGGACTCGATT rpsO 3454354 - 3454094 - | 30S ribosomal protein S15 truB 3455437 - 3454511 - | tRNA pseudouridine synthase B TERM 2648 3455285 - 3455320 + g 70 -7.6 -4.03234 | gap 1 GAGCGGTAGCAGGCC GGTGGCCA-GCGGGT CCAGGCT ACCGGTATGGCCACC TTTCTCTGCACGCAA TERM 2649 3455503 - 3455532 + r 73 -12.9 -3.1552 | gap 1, opp_overlap 3455483 3455480 3455513, overlap 3455501 GCAGCAGAGGCGGCA GGCCGTAACAGCGC TCA GCGCTGTT-CGGCG TCTTCGTCACTGGAC rbfA 3455909 - 3455517 - | ribosome-binding factor A TERM 2650 3455986 - 3455960 - R 73 -2.9 -4.75174 | overlap 3455964 3455965 CACCGAAGCCAAAAA CGAATGCGG GCGGTCATG CCGCCCTCG CCTTGCAGAACCTGC infB 3458815 - 3456053 - | translation initiation factor IF-2 TERM 2651 3456874 - 3456888 + g 71 -9.2 -3.72576 | opp_overlap 3456860 ATGGGCCCGCCGAGC CCGGCT GAT GGCCGG TTTCGTCGAACAGCG TERM 2652 3458024 - 3458042 + g 75 -12.4 -3.50853 | overlap 3458008 GACACCGGCCACCAT GACGTGCG AAC CGCGCGTC TTGTGCTTGGCGGCG TERM 2653 3458575 - 3458595 + g 90 -16.1 -3.60971 | TCTTCTTGGCTGCTT CGCTCGCCG CTT CGGCGGGCG TTTCGGCCTTGCCAT nusA 3460380 - 3458869 - | transcription elongation factor NusA TERM 2654 3459415 - 3459435 + g 74 -13.3 -3.28712 | CTGGCCGCCCTTGCC GATCGCCTG CGC CAGGCGGTC TTCTGCCACGGCCAG TERM 2655 3460322 - 3460332 + g 76 -2.4 -4.8622 | overlap 3460320 TCGAAGATCACTTCG CGCG GCA CGCC TTTTTCATTGGCGAC TERM 2656 3460404 - 3460426 + r 74 -5.4 -4.53419 | overlap 3460392 3460391 TCCGCGCGCGGCTTG CCAGCCGCCG ACT CGTTGGATGG TTTCTTCTTCTCGTG XOO3221 3460975 - 3460385 - | hypothetical protein TERM 2657 3460950 - 3460963 + g 75 -4.5 -4.65895 | GGACTCAGCAGATTC GCGAT TTCA GTCGC TTTTTCGCTCACAGA TERM 2658 3461070 - 3461048 - R 100 -19.2 -5.00616 | opp_overlap 3461051 CGGTTCCGGAAAAAA CAAGGGGCCC GAT GGGCCCCTTG AGTGAAAAAAGCCCG TERM 2659 3461051 - 3461067 + r 81 -15.1 -3.05384 | opp_overlap 3461048 TTCCGGAAAAAACAA GGGGCCC GAT GGGCCCC TTGAGTGAAAAAAGC TERM 2660 3461101 - 3461081 - R 83 -4.7 -5.08824 | gap 1, overlap 3461082 3461083 CCTTGAGTGAAAAAA GCCCGACC TCTCAG GGTC-GGC GTAAGGACGGGAACT nuoN 3462913 - 3461450 - | NADH dehydrogenase subunit N nuoM 3464449 - 3462947 - | NADH dehydrogenase subunit M nuoL 3466629 - 3464470 - | NADH dehydrogenase subunit L TERM 2661 3465197 - 3465247 + g 100 -22.6 -2.73364 | TCGGCATCGGTATGG GCGCTGTCGTGATGCGCATGCGCG TCG TGCGCATGGGCGTCGCGGAAGCGC TCCTTGCCGTGGAAG nuoK 3466942 - 3466637 - | NADH dehydrogenase subunit K nuoJ 3467622 - 3466939 - | NADH dehydrogenase subunit J nuoI 3468097 - 3467606 - | NADH dehydrogenase subunit I nuoH 3469189 - 3468098 - | NADH dehydrogenase subunit H nuoG 3471420 - 3469186 - | NADH dehydrogenase subunit G nuoF 3472751 - 3471417 - | NADH-ubiquinone oxidoreductase NQO1 subunit nuoE 3473282 - 3472755 - | NADH dehydrogenase subunit E nuoD 3474586 - 3473279 - | NADH dehydrogenase subunit D nuoC 3475335 - 3474583 - | NADH dehydrogenase subunit C nuoB 3475947 - 3475372 - | NADH dehydrogenase subunit B nuoA 3476375 - 3475917 - | NADH dehydrogenase subunit A TERM 2662 3476462 - 3476497 + r 91 -17 -3.30159 | gap 1 TCCGCCACCTGGGCA TACGTTGCGCCGCTGGG CAT CCCAGTG-CGCAGCGTA TTGTAACCGGCTTCA secG 3476971 - 3476510 - | preprotein translocase subunit SecG tpiA 3477805 - 3477005 - | triosephosphate isomerase TERM 2663 3478401 - 3478388 - gR 76 -9.5 -4.07687 | overlap 3478374 ACTGGCGCTGGAAAA CGCCG ATTG CGGCG TCAAGGTGTGTGCGC TERM 2664 3478595 - 3478619 + Gr 80 -12.2 -3.75629 | gap 1 CCGATTGGTCAATGC CGCACTGCGGC TGCT GCCGCA-TGCG TTTGCCTTACGCATG XOO3239 3477804 - 3478673 + | dehydrogenase TERM 2665 3478848 - 3478819 - TR 90 -13.5 -4.07885 | gap 1 GAGCGGCTCGCAAAA CGACTGCGCACCGC CAG GCGG-GCGCGGCCG GTGCTCGGAAGCGGC TERM 2666 3479032 - 3479011 - TR 72 -7.3 -4.12198 | overlap 3479002 3479014 CACAAGCGCTGAAAA CAATCGCTG CTCT CAGTGATTG ACGATGTCGCCATGC glbN 3479622 - 3479023 - | cyanoglobin XOO3243 3480406 - 3479960 - | transposase TERM 2667 3480023 - 3480054 + g 100 -2.9 -5.86061 | overlap 3480022 TTTTGGTGTTCCATC CGCCCCGCGATTT CCCGAT GGATTGTGGGCCG TTTTTTTTAATGCGC TERM 2668 3481359 - 3481322 - R 70 -7.8 -4.08767 | gap 2 CCGATGTGCTCAAAA CACAGTCGCCGGCCAGTG CGTG CACTGGC-G-CGAATGCG CTGGCAGCGGATGCA XOO3246 3483769 - 3481403 - | phosphodiesterase TERM 2669 3482922 - 3482902 - G 80 -5.4 -4.82901 | overlap 3482904 TGCGTGCGAGAAAAA TCGCCACA ACCAG TGCGGCAA CAGTGGCTAACCCGG XOO3247 3484446 - 3483766 - | hypothetical protein TERM 2670 3484225 - 3484204 - G 81 -13.7 -3.53012 | GTCGTTGTTCGCAAA GCGCACCAG AGTC CCGGTGCGC ACTGCCAGCACGAAC TERM 2671 3484376 - 3484337 - G 75 -15 -2.67515 | gap 1, overlap 3484334 TCGACCAGCACACCA CTGGCGTCGGCGACGGTCA CGG TGACCGACGCCG-CAGCAG CCGTCCCTGCGGCGG XOO3248 3485588 - 3484650 - | oxidoreductase mrsA 3487060 - 3485711 - | phosphohexose mutase accD 3487944 - 3487057 - | acetyl-CoA carboxylase subunit beta TERM 2672 3487786 - 3487804 + g 75 -4.5 -4.68103 | CATGTGGTGGTCGCA CTTCGGG CACAC CTCGAGG TTTTCTTCGAGTTCC TERM 2673 3488220 - 3488202 - R 71 -13.8 -2.52464 | GCGCGTTCCAAGGCA CGCGCGCC GGC GGCGCGCA AGCTGTGCCGTCTCG TERM 2674 3488229 - 3488254 + r 73 -13.3 -3.24017 | overlap 3488225 GCGCGCAAGCTGTGC CGTCTCGCCCT GGTG AGAGCGAGACG TTGGCTTCTACGCTT trpA 3489128 - 3488262 - | tryptophan synthase subunit alpha TERM 2675 3488892 - 3488837 - G 72 -13 -3.09987 | gap 1, overlap 3488828 CCAACACGTACGCAA GGCCGGCACCGCGTCCCAGCGC-GCGC TCG GAGCTGCGCTGGATGGTGGGGCCGTCC GCCATCGGGTCGGAG trpB 3490732 - 3489515 - | tryptophan synthase subunit beta TERM 2676 3489909 - 3489870 - G 72 -12.8 -3.10344 | gap 1, opp_overlap 3489889, overlap 3489848 TTGCCATGCAACACA CCGGGGCGCCCTGCGGC GATCGAT GCCGCATGGCGGCC-GG TAGCGATGCCGTCGC trpI 3490790 - 3491806 + | transcriptional regulator trpF 3492845 - 3492177 - | N-(5'-phosphoribosyl)anthranilate isomerase truA 3493615 - 3492842 - | tRNA pseudouridine synthase A XOO3256 3493958 - 3493785 - | hypothetical protein TERM 2677 3494020 - 3494004 - R 72 -7.2 -4.13767 | opp_overlap 3494017 GGCTGCACGGTAAAA GCCACC GTCCA GGCGGC CGTCATGGAAGGCCA XOO3257 3494192 - 3494037 - | hypothetical protein XOO3258 3496174 - 3494189 - | FimV TERM 2678 3495644 - 3495692 + g 72 -13.2 -3.14132 | gap 2 TCCAGCGGTGCCCTG TG-CATCGCG-GTTGGCCACCGGC GCA GCCGCTGGCTCGCGCGCGATGGCA TTACTGGAACCGGCG TERM 2679 3496794 - 3496807 + r 78 -6.7 -4.57209 | TAGCCACCCGCATGG CGACT GAGC AGTCG TTTTGTAGTTGCTCT asd 3497847 - 3496822 - | aspartate-semialdehyde dehydrogenase TERM 2680 3497954 - 3497966 + r 100 -6.9 -5.44119 | overlap 3497950 TTGGTCGCGATGGTG CCGGT GAC GCCGG TTTTTTTCGCATCCG XOO3260 3499059 - 3497932 - | 2-hydroxyacid dehydrogenase TERM 2681 3498072 - 3498027 - GR 70 -11.8 -3.15544 | CCGCATCGGTATTAA GC-GCGCTCGGCGGATGGCCGG CATG CGGGCCTTC-GCCCAGCGCAGC GATCAGGTTGTCCAC aroC 3500101 - 3498998 - | chorismate synthase yfcB 3501038 - 3500112 - | N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase XOO3263 3501119 - 3501769 + | hypothetical protein TERM 2682 3502710 - 3502694 - T 72 -4.3 -4.63932 | overlap 3502695 GAGCGGCGAACAAAA CGACTGC GCA GCTGTCA GGTGGGCGCAGACGG TERM 2683 3502774 - 3502805 + T 89 -11.4 -4.3739 | GCCGATTCCGAGCAC CGGCCGCGCCCGCC TGGC GGTGAGCGCAGTCG TTTTGTGAGCCGCTC dniR 3504805 - 3503165 - | membrane-bound lytic murein transglycosylase D precursor TERM 2684 3505264 - 3505226 - g 89 -13 -4.18018 | overlap 3505227 CTGGCGGACGTAAAA GGCGACGTCGCCGGCC TGGCCGT GGCAGGCGACGGCGCG CCCGGCGTGCTGCAG TERM 2685 3505263 - 3505227 - g 85 -16.5 -3.10597 | overlap 3505226 TGGCGGACGTAAAAG GCGACGTCGCCGGCC TGGCCGT GGCAGGCGACGGCGC GCCCGGCGTGCTGCA XOO3267 3504935 - 3505390 + | hypothetical protein XOO3268 3505938 - 3505459 - | hypothetical protein TERM 2686 3505529 - 3505548 + g 71 -10.6 -3.66999 | overlap 3505490 TCGCGCACGCCACGC CGCCGGCG CTTG CGACGGCG TTTGCGTAGATGCAT XOO3269 3507388 - 3506171 - | integral membrane protein TERM 2687 3506932 - 3506922 - GR 100 -6.8 -5.33785 | overlap 3506923 AACCAGTAGAAAAAA CGCA CTC TGCG CCTGCCCCAGACCAC XOO3270 3507627 - 3507349 - | integral membrane protein TERM 2688 3508194 - 3508169 - g 76 -6.1 -4.58395 | opp_overlap 3508191, overlap 3508186 CGCACTCCTGAAAAA GCGCGTGGA CGACGAAT TCGACGCGC ACTTGCCGGCAGGCA greB 3507687 - 3508253 + | transcription elongation factor GreB XOO3272 3509777 - 3508377 - | hypothetical protein TERM 2689 3508883 - 3508909 + g 71 -10.1 -3.6692 | opp_overlap 3508848, overlap 3508882 TCTCCGGGCACATCG CCTTCCAGCGC TGCAC GCGCTGCAGGG TCTTTTCCACTGCAC TERM 2690 3510174 - 3510154 - H 78 -3.1 -5.07486 | overlap 3510156 GATCTGGAAGAAAAA GACGTGCAG CTG CCGTACGAC CAGGAAAGCGTCCAG XOO3275 3510333 - 3510668 + | hypothetical protein XOO3276 3510696 - 3510863 + | hypothetical protein TERM 2691 3511134 - 3511175 + F 86 -11.6 -4.19735 | gap 2 CGCGTTGATGTGCGG CGTTGCGCCCG-GGT-GGCG CGGT CGCCGACTGCGCGCGCAGCG TTTCGTTTTGCCAGC TERM 2692 3511699 - 3511732 + G 75 -9.5 -4.05446 | overlap 3511701 CCTGGCCCATATGGA TGTCGGCCACCTGAT CGCG ACCTGGTGGCCGATG TTTCTCATTGCCGCG TERM 2693 3511701 - 3511730 + G 77 -12.1 -3.6217 | overlap 3511699 TGGCCCATATGGATG TCGGCCACCTGAT CGCG ACCTGGTGGCCGA TGTTTCTCATTGCCG XOO3277 3511613 - 3511798 + | hypothetical protein dcd 3512402 - 3511833 - | deoxycytidine triphosphate deaminase TERM 2694 3511961 - 3511926 - G 79 -5.5 -4.62069 | opp_overlap 3511933 3511935, overlap 3511928 3511960 GTCGGACTGGAAAAA CAGCATCTGCGCC-ACG CCTT CGTTGGCGTAGATAC-G CGCCGGCAGCGGCGT TERM 2695 3511960 - 3511928 - G 73 -9.2 -3.92746 | gap 1, opp_overlap 3511933 3511935, overlap 3511926 CGGACTGGAAAAACA GCATCTGCGCC-ACG CCTT CGTTGGCGTAGATAC GCGCCGGCAGCGGCG XOO3279 3513346 - 3512495 - | hypothetical protein XOO3280 3514572 - 3513814 - | transposase TERM 2696 3514596 - 3514626 + H 73 -13.3 -3.14132 | gap 1 AGTACGATGGCACCA GGC-ACAGGCCCGC ACGG GCGGGCCTGTCGCA TTCATGCCGGCACCG XOO3281 3514734 - 3516749 + | metallopeptidase TERM 2697 3516794 - 3516776 - T 100 -16 -4.8622 | opp_overlap 3516776 TCGGGCAATCAAAAA GAGCGCGG ATT CCGCGCTC TTTTTTTGTTTATGG TERM 2698 3516776 - 3516794 + T 100 -16 -6.02919 | opp_overlap 3516776 TCGGGCAATCAAAAA GAGCGCGG ATT CCGCGCTC TTTTTTTGTTTATGG TERM 2699 3516874 - 3516916 + T 100 -30.8 -2.65112 | ACCATCCTTGTAGGA GCGGCCTTGGCCGCGATG AAATGCC CATCGCGGCCAAGGCCGC TCCTATGGATCACTT TERM 2700 3516935 - 3516992 + T 100 -21.5 -3.01712 | gap 1, opp_overlap 3516948, overlap 3516948 TATGGATCACTTGGA GCGGCTGACAAAACGT-GGCGCGCAGCT GTC AGGTGGGCGCGGACGTTTTGTTAGCCGC TCTTGAAACGACGCA XOO3282 3517802 - 3517020 - | integral membrane protein XOO3283 3518313 - 3517759 - | methylated-DNA-protein-cysteine S-methyltransferase related protein XOO3284 3519566 - 3518604 - | IS1595 transposase XOO3287 3520648 - 3520334 - | reductase TERM 2701 3520499 - 3520552 + g 93 -18.4 -3.33696 | gap 3 GCCGTCGCTGCCCAT GATGGTGTGGCG--G-TCCTGCAGCAC GCC GCGCTGCGGGATCAACGCCACACCATC TTCATTGAGACGGCG dadA 3522149 - 3520851 - | D-amino acid dehydrogenase subunit TERM 2702 3522067 - 3522032 - GR 72 -11.8 -3.28712 | gap 1 GGCCCGCTTGGACAA GTGCCAGCGCG-GTGGC CAG GCCAATCGCGCCCGCAC CAATCACCAGAACGT yxaH 3523356 - 3522109 - | transport protein TERM 2703 3523423 - 3523401 - R 84 -14.1 -3.80625 | GCCGCAGAATGCAAA CGGCCCACC GAGGG GGCGGGCCG TCAGGAACAGCAATC slyD 3524060 - 3523581 - | peptidyl-prolyl cis-trans isomerase TERM 2704 3524027 - 3524045 + g 74 -2.3 -4.75308 | CGGAAACGGTGTAGT GGAAGCG GACGA CGCTGTC TTTTTCGATCTTCAT TERM 2705 3524533 - 3524548 + G 82 -6.8 -4.62069 | overlap 3524529 GCCAGAGCGGCTTGC CACCGG CGAT CTGGTG TTTTTCGGCTCCGGC XOO3291 3524096 - 3524707 + | lipoprotein XOO3292 3524817 - 3525566 + | hypothetical protein TERM 2706 3525616 - 3525596 - T 84 -14 -3.72576 | opp_overlap 3525596 GCCTCCGTCATGAAA GGCCGCGA TGATC TCGCGGCC TTTTTTGTTGCGCGG TERM 2707 3525596 - 3525616 + T 100 -14 -5.4505 | opp_overlap 3525596 GCCTCCGTCATGAAA GGCCGCGA TGATC TCGCGGCC TTTTTTGTTGCGCGG XOO3293 3526265 - 3525774 - | acyl-CoA thioester hydrolase XOO3294 3527030 - 3526512 - | hypothetical protein gltT 3528788 - 3527379 - | glutamate symport protein TERM 2708 3528481 - 3528456 - G 81 -3.1 -4.99861 | gap 1, opp_overlap 3528471, overlap 3528457 GACGAACCATAAAAA CGTGCGTCCACC GAG GGCGG-CGACCG ACTTTTGCCCGTGCA phoA 3528843 - 3530549 + | alkaline phosphatase TERM 2709 3530642 - 3530678 + G 72 -12.9 -3.14132 | overlap 3530626 CCCGGTGCTGCTGGC CTACAGCGGCGGGATGG ATT CCAGCGCGCTGCTGCAG TTGCTGGCGGCAACG TERM 2710 3531595 - 3531628 + G 76 -9.6 -4.07687 | gap 1, overlap 3531576 AATTGCCCGATGGTG CGCAGTTGCGGTTGC TGGGC GCAACCG-GCCTGCG TTTTGCGCAACCGCT mesJ 3530583 - 3531887 + | cell cycle protein xseB 3531919 - 3532179 + | exodeoxyribonuclease VII small subunit ispA 3532181 - 3533056 + | geranyltranstransferase; farnesyl-diphosphate synthase TERM 2711 3534056 - 3534017 - g 71 -13.6 -2.78463 | gap 1 AGCCGGTGGACTACA TCGGGCGCCTT-GTCAAGC GCG GCCTGCCCAAGGCGACCGA CTTCACCATCCTGCA XOO3300 3533614 - 3534837 + | extracellular protease TERM 2712 3534874 - 3534840 - T 100 -19.5 -3.54741 | gap 1, opp_overlap 3534841 3534843 3534847 3534851, overlap 3534843 3534847 CATCATCGTCTGAAA CGACAAAGGCCCGGCA GCGA TGCCGGGCCTTTGT-G TTTCGCACCGCGCCG TERM 2713 3534841 - 3534874 + T 100 -19.7 -3.53012 | opp_overlap 3534840 3534843 3534847, overlap 3534843 3534847 3534851 ATCATCGTCTGAAAC GACAAAGGCCCGGCA GCGA TGCCGGGCCTTTGTG TTTCGCACCGCGCCG TERM 2714 3534872 - 3534843 - T 100 -22.3 -2.90813 | opp_overlap 3534843 3534841 3534847 3534851, overlap 3534840 3534847 CATCGTCTGAAACGA CAAAGGCCCGGCA GCGA TGCCGGGCCTTTG TGTTTCGCACCGCGC TERM 2715 3534843 - 3534872 + T 100 -22.3 -3.34398 | opp_overlap 3534840 3534843 3534847, overlap 3534841 3534847 3534851 CATCGTCTGAAACGA CAAAGGCCCGGCA GCGA TGCCGGGCCTTTG TGTTTCGCACCGCGC TERM 2716 3534847 - 3534868 + T 100 -17.3 -4.32857 | opp_overlap 3534843 3534840 3534847, overlap 3534843 3534841 3534851 GTCTGAAACGACAAA GGCCCGGCA GCGA TGCCGGGCC TTTGTGTTTCGCACC TERM 2717 3534868 - 3534847 - T 100 -17.3 -4.13654 | opp_overlap 3534847 3534843 3534841 3534851, overlap 3534843 3534840 GTCTGAAACGACAAA GGCCCGGCA GCGA TGCCGGGCC TTTGTGTTTCGCACC XOO3302 3535397 - 3534891 - | hypothetical protein pmbA 3537297 - 3535885 - | hypothetical protein TERM 2718 3536590 - 3536543 - G 75 -12.6 -3.53761 | gap 1, opp_overlap 3536547, overlap 3536531 3536544 GAACGCGGCTGCAAA CGCGCCAGAGTGCGCTCGGCGGC ATG GCGGCCGATCGCA-TCCGGTGCT TCCAGATCTTCGCGC TERM 2719 3536589 - 3536544 - G 78 -16.1 -2.72043 | gap 1, opp_overlap 3536547, overlap 3536531 3536543 AACGCGGCTGCAAAC GCGCCAGAGTGCGCTCGGCGGC ATG GCGGCCGATCGCA-TCCGGTGC TTCCAGATCTTCGCG XOO3304 3537398 - 3537979 + | hypothetical protein tldD 3539681 - 3538236 - | hypothetical protein TERM 2720 3539339 - 3539318 - G 77 -15.1 -2.87132 | CGGTGGCTGGATACA GCGCGCGGC CACT GCCGCGCAC CAGCGAACGGGTGGA XOO3306 3539732 - 3540163 + | hypothetical protein XOO3307 3540151 - 3541032 + | putative ISXo8 transposase XOO3308 3541002 - 3541328 + | putative transposase XOO3309 3541325 - 3541801 + | putative transposase XOO3310 3541838 - 3542386 + | putative ISXo8 transposase XOO3313 3546779 - 3543015 - | hypothetical protein TERM 2721 3546735 - 3546696 - G 91 -16.4 -3.71848 | overlap 3546697 CGCGCCCACCAACAA CGCGACCGCCACCAGCGC AAGC GCGCTGGCAGTGATCGCA TAGCGGCGAAACAGG TERM 2722 3546734 - 3546697 - G 87 -17.7 -2.82895 | overlap 3546696 GCGCCCACCAACAAC GCGACCGCCACCAGCGC AAGC GCGCTGGCAGTGATCGC ATAGCGGCGAAACAG rng 3548426 - 3546927 - | ribonuclease G TERM 2723 3548130 - 3548161 + g 70 -5.6 -4.23213 | CAGCTCCACGATCGG CACCGAGGCCGGCG GTGG CGGCGGGATCGGCG TTTCTTCGGTATCGA maf 3549148 - 3548426 - | Maf-like protein bp26 3549137 - 3549871 + | outer membrane protein XOO3318 3550083 - 3550454 + | putative transposase XOO3319 3550420 - 3550896 + | putative transposase TERM 2724 3551047 - 3551061 + F 74 -2.1 -4.86029 | gap 1 CGACGTGTTGTTAGC CGCTCT TGAT AG-GCG TTTTCTGTTGTTTGT TERM 2725 3551983 - 3552019 + G 91 -17.3 -3.29144 | opp_overlap 3551980 3551977 TGGCACCAACGAGTG GCACTTCGGCGGCCAGA TGC TTTGGCGGCCGAAGAGC TTGTCCAGCGACTAC oar 3551120 - 3554308 + | Oar protein TERM 2726 3554332 - 3554355 + F 88 -8.8 -4.67982 | opp_overlap 3554347, overlap 3554333 CCGTCAGCGTCGTTT CCCCAGCTCT GTAA AGGGCTGGGA TTTTCTTGCATCCAC TERM 2727 3554333 - 3554354 + F 74 -12.3 -3.40307 | opp_overlap 3554347, overlap 3554332 CGTCAGCGTCGTTTC CCCAGCTCT GTAA AGGGCTGGG ATTTTCTTGCATCCA TERM 2728 3554370 - 3554389 + F 100 -15 -4.86731 | opp_overlap 3554347 ATTTTCTTGCATCCA CGCCCAGC TTCG GCTGGGCG TTTTGTTTGCGCGGA XOO3321 3554463 - 3555434 + | TonB-like protein XOO3322 3556200 - 3555724 - | SPOUT methyltransferase superfamily protein XOO3323 3556749 - 3556958 + | hypothetical protein XOO3324 3558399 - 3557284 - | DnaJ domain-containing protein TERM 2729 3557773 - 3557795 + g 85 -4.9 -5.07652 | gap 2 CTCGCGCAACGGGGG CGGTT-C-GGC ACT GCCGGCAACCG TTTTCTTTTCGGCGC TERM 2730 3558225 - 3558202 - G 75 -14.6 -2.71681 | gap 1 CAATTCGGCGAAGTA GCGCTCGCGCC ACT GG-GCGAGCGC ATGCTGCCAGGCCTC XOO3325 3558827 - 3558411 - | hypothetical protein holA 3560808 - 3559780 - | DNA polymerase III subunit delta rlpB 3561472 - 3560831 - | lipoprotein TERM 2731 3561596 - 3561583 - R 76 -8.1 -4.17701 | overlap 3561576 CCCAGAAATGACAAA CGCGT CGCC ACGCG CCAGTGATAAAGACG leuS 3564622 - 3561980 - | leucyl-tRNA synthetase TERM 2732 3563673 - 3563699 + g 70 -5.1 -4.33165 | gap 2, overlap 3563672 3563673 CTGATGGGATGCACT GCG-GTCA-GGCC AGT GGCCATGCCGCGC TTTTCCTGGGTTTCC XOO3331 3565306 - 3564695 - | hypothetical protein trx 3565388 - 3566368 + | thioredoxin TERM 2733 3566442 - 3566461 + G 91 -16.4 -3.80625 | TCACCGCCGGATGCG CGCCGGGC CTGT GCCCGGCG TTTGCGTTCTGGGCC TERM 2734 3566647 - 3566668 + G 87 -5.7 -5.06414 | ATCACTGTTCAAGTT CGGCCTCAA TCTC TGGCGGCCG TTTTTGTTCGCCGGC TERM 2735 3567011 - 3566995 - g 71 -7.9 -4.07568 | GCGCTGGTTCGAAAA CGAGGTG CAT CACCGCG ACGGCGAGGTGGTCG XOO3333 3566378 - 3567073 + | hypothetical protein XOO3334 3567507 - 3567373 - | transposase TERM 2736 3567504 - 3567488 - G 74 -10.1 -3.70902 | opp_overlap 3567483 3567500, overlap 3567489 CGGGTCAGATCGAAA CGGCGGT TGA ACCGCCA CATCGTCTCTGCCAG TERM 2737 3568238 - 3568223 - H 74 -4.6 -4.55697 | ACGCGGACAAACAAA GCCCTG TGGC CAGCGC GAGATCTCCAACGCC XOO3337 3568437 - 3568883 + | transposase TERM 2738 3569445 - 3569433 - f 81 -7.7 -4.53303 | TACGGCGATACAAAA TCTGC TCT GCAGA CAGGACGGTGCGGAT TERM 2739 3570255 - 3570206 - f 82 -10.7 -4.08948 | gap 1 CAAGCCGAGAAAGAA GCCCGTTGATCAGCAAGGCGCGGG CCA CACGC-CCTTGCCGATATACAGAC TAAGGTGGTGCTGAC XOO3339 3570604 - 3570837 + | hypothetical protein TERM 2740 3570869 - 3570901 + F 79 -15.6 -2.87344 | opp_overlap 3570875, overlap 3570856 3570872 3570897 CGTCTTGGCATCTGG ACATGACGCCGGCG CATGA CGTCGGCGTCATGC TGTGTGCCACGCATG TERM 2741 3570872 - 3570898 + G 78 -15.9 -2.69151 | opp_overlap 3570875, overlap 3570869 3570856 3570897 CTTGGCATCTGGACA TGACGCCGGCG CATGA CGTCGGCGTCA TGCTGTGTGCCACGC XOO3340 3570871 - 3571845 + | peptidyl-prolyl cis-trans isomerase XOO3342 3572044 - 3571853 - | hypothetical protein TERM 2742 3571937 - 3571909 - G 81 -11 -4.11216 | gap 1, opp_overlap 3571910 TCGGGATTGGTAAAA GCGCGCCGCGC GTGGCTTG GCG-GGCGCGC TGGCTGAAGGCCACG XOO3343 3573517 - 3572135 - | putative ISXo8 transposase XOO3344 3574765 - 3573542 - | ISxac1 transposase XOO3345 3574902 - 3575429 + | hypothetical protein XOO3346 3576382 - 3575426 - | transposase TERM 2743 3575557 - 3575541 - G 74 -10.1 -3.70902 | opp_overlap 3575536, overlap 3575542 CGGGTCAGATCGAAA CGGCGGT TGA ACCGCCA CATCGTCTCTGCCAG TERM 2744 3576286 - 3576275 - G 79 -7.2 -4.55697 | overlap 3576277 ACGCGGACAAACAAA GCCC CTGT GGGC ACAGCGCGAGTATCT XOO3347 3576609 - 3577055 + | transposase glgX 3577656 - 3579833 + | glycogen debranching enzyme TERM 2745 3579864 - 3579900 + T 100 -23.1 -4.27316 | opp_overlap 3579857 GCGAATGATGGACGA CGCTTGCTGCCTGCCGG TAT TCGGTGGGCAGCAAGCG TTTTCGCTTCAGCCG XOO3350 3580893 - 3580384 - | putative transposase TERM 2746 3580653 - 3580642 - GT 76 -2.2 -4.8622 | overlap 3580643 GGCGGCAATGAAAAA TGCA GCCT CGCA GCTCTGCAACTCGTC XOO3351 3581353 - 3580868 - | putative transposase XOO3352 3582508 - 3581516 - | putative transposase TERM 2747 3581785 - 3581774 - G 76 -2.2 -4.8622 | overlap 3581775 GGCGGCAATGAAAAA TGCA GCCT CGCA GCTCTGCAACTCGTC TERM 2748 3582740 - 3582755 + G 85 -4.6 -4.99043 | GCGTTTGGAGATCTC GCGCTG GCCA CAGGGC TTTTGTTTGTCCGCG XOO3353 3582586 - 3582942 + | transposase XOO3354 3582978 - 3583280 + | transposase TERM 2749 3583478 - 3583494 + F 74 -10.1 -3.70902 | opp_overlap 3583473, overlap 3583479 CTGGCAGAGACGATG TGGCGGT TCA ACCGCCG TTTCGATCTGACCCG tnpA 3583658 - 3583990 + | transposase XOO3360 3584909 - 3585451 + | IS30 family transposase XOO3361 3585448 - 3585981 + | putative transposase XOO3362 3585947 - 3586423 + | putative transposase TERM 2750 3586464 - 3586442 - T 81 -2.6 -5.24129 | opp_overlap 3586452 3586456, overlap 3586443 3586452 3586460 GGTTCTTAGAAAAAA GCGGATCGAA CCA CTCAACCCGG ATACAGCGGAAAGCG xrvA 3586854 - 3586456 - | virulence regulator XOO3364 3587391 - 3586939 - | hypothetical protein XOO3365 3587700 - 3588425 + | IS1478 transposase TERM 2751 3588492 - 3588509 + F 72 -4 -4.61482 | overlap 3588487 3588493 GCTGGGCATAGGCCG CCGGCG TCATTC CGCCGA TTGTTTTTTGGGGCG TERM 2752 3588963 - 3588986 + F 72 -4.5 -4.59773 | gap 1, opp_overlap 3588962 GTGGGCCGCAGCAAC GGCGCACGCT CGCCT AGCG-GCACC TTTTTACGCGTGCGG XOO3368 3589566 - 3590057 + | hypothetical protein XOO4876 3590260 - 3590427 + | putative transposase TERM 2753 3590450 - 3590486 + F 81 -15.3 -3.05844 | gap 1 TACTACCAGTGCCGG GCGTGCCGGCAT-CAA ACCACC TTGCGTGCCGGCACGC TGTTGCAATCGAGCA XOO3369 3590471 - 3591220 + | putative transposase TERM 2754 3591741 - 3591771 + T 85 -15.5 -3.40073 | gap 1, opp_overlap 3591741 3591744, overlap 3591742 3591744 CAATGTGCGCAGATA GG-ACGAGGGCCGG TTGC CCGGCCCTCGTGTC TTGCTTGCTACCCGT TERM 2755 3591770 - 3591741 - T 74 -13.5 -2.87881 | opp_overlap 3591741 3591742 3591744, overlap 3591744 CAATGTGCGCAGATA GGACGAGGGCCGG TTGC CCGGCCCTCGTGT CTTGCTTGCTACCCG TERM 2756 3591742 - 3591769 + T 91 -17 -3.27029 | opp_overlap 3591741 3591744, overlap 3591741 3591744 AATGTGCGCAGATAG GACGAGGGCCGG TTGC CCGGCCCTCGTG TCTTGCTTGCTACCC TERM 2757 3591767 - 3591744 - T 90 -19.6 -2.69151 | opp_overlap 3591742 3591741 3591744, overlap 3591741 TGTGCGCAGATAGGA CGAGGGCCGG TTGC CCGGCCCTCG TGTCTTGCTTGCTAC TERM 2758 3591744 - 3591767 + T 95 -19.6 -3.19824 | opp_overlap 3591744 3591741, overlap 3591742 3591741 TGTGCGCAGATAGGA CGAGGGCCGG TTGC CCGGCCCTCG TGTCTTGCTTGCTAC estA 3593619 - 3591802 - | lipase; esterase TERM 2759 3593760 - 3593740 - H 80 -6 -4.78149 | CGCATAACGCAAAAA CGGGCGCC CGGAC GGCACGCG ATGCCACAATGATGA XOO3371 3593777 - 3593977 + | sulfur carrier protein ThiS thiG 3594348 - 3595307 + | thiazole synthase TERM 2760 3595502 - 3595528 + F 76 -10.1 -3.94634 | gap 1, overlap 3595504 CGGCGCGCAAGCGCT GCCTCCTCGCCC CGTT GGGAGAGG-GGC TTCTTTCAGCTCCTG TERM 2761 3596088 - 3596073 - g 79 -3.9 -4.85599 | opp_overlap 3596086, overlap 3596082 3596085 CCCATGGCACAAAAA GCGCC ACAACA AGCGC CGCCTGATCCAGCCG TERM 2762 3596110 - 3596082 - g 77 -13.1 -3.37589 | opp_overlap 3596086 3596102, overlap 3596073 3596085 CAAAAAGCGCCACAA CAAGCGCCGCCTG ATC CAGCCGGCGTTTG CGCAGTTGCTGGTAC TERM 2763 3596086 - 3596106 + G 77 -12.5 -3.58037 | opp_overlap 3596073 3596085 3596082, overlap 3596102 AAGCGCCACAACAAG CGCCGCCTG ATC CAGCCGGCG TTTGCGCAGTTGCTG trmB 3595609 - 3596367 + | tRNA (guanine-N(7))-methyltransferase TERM 2764 3597409 - 3597425 + G 81 -2.9 -5.08824 | overlap 3597411 CGCATGTCCTCGCGG TTGCGCA ATC TGGGCGA TTTTTTCAATCCCAG TERM 2765 3597883 - 3597869 - g 70 -5.7 -4.20696 | CGATCAACTGGAAAA CCATC TTCAT GATGG CCGGCCTGATTCCGC sac1 3596443 - 3598305 + | sulfur deprivation response regulator XOO3375 3598887 - 3598363 - | hypothetical protein TERM 2766 3598659 - 3598648 - G 82 -7.2 -4.59773 | TTCGACTTCCAAAAA CCCG GCAT CGGG AATCTGCGTCAACGT XOO3376 3598964 - 3599239 + | hypothetical protein TERM 2767 3599324 - 3599336 + G 70 -4.8 -4.42238 | TGCGGTTTTGGCGTG CTGG AACTG CCAG TTTTCGTTACGCTAG XOO3377 3599294 - 3600079 + | IS1478 transposase XOO3378 3600143 - 3600760 + | IS1478 transposase TERM 2768 3600793 - 3600816 + F 91 -5.9 -5.26918 | GACTAAATAGACCCA CGTGGCTGG ATAACG CCCGCTACG TTTTTTATGGCCTCT XOO3379 3601583 - 3602125 + | IS30 family transposase TERM 2769 3602416 - 3602461 + G 84 -6.8 -4.7254 | gap 3, overlap 3602415 CCATGCGCGCGAGAT GGGCGCCT--CCGCAC-CGGCCT CCA AGGCCGAGCGCGGCCAGCCGACC TTTTTCATGAAGCCT XOO3380 3602294 - 3603007 + | fumarylacetoacetate hydrolase mscL 3603056 - 3603490 + | large-conductance mechanosensitive channel XOO3383 3604411 - 3603947 - | transposase TERM 2770 3605081 - 3605117 + r 81 -15.3 -3.05844 | gap 1 TACTACCAGTGCCGG GCGTGCCGGCAT-CAA ACCACC TTGCGTGCCGGCACGC TGTTGCAATCGAGCA TERM 2771 3605945 - 3605905 - R 95 -18.9 -3.53012 | overlap 3605906 GCTGTCCGCGCTAAA TCGCTTGCGCGCGCACTGC CTG GCAGTGCGCGCGCTTACGG CAGATCGAGATGCGC TERM 2772 3605944 - 3605906 - R 100 -22.4 -2.71712 | overlap 3605905 CTGTCCGCGCTAAAT CGCTTGCGCGCGCACTGC CTG GCAGTGCGCGCGCTTACG GCAGATCGAGATGCG TERM 2773 3606780 - 3606759 - R 70 -7.2 -4.07885 | GATGGCTGCCGAAAA CAGGCCGC GCGCGA GCGGGCTG AGCATCAGCAGACCT XOO3388 3608519 - 3607458 - | tRNA/rRNA methyltransferase XOO3389 3608857 - 3608630 - | acetyltransferase TERM 2774 3609063 - 3609116 + r 95 -20.3 -3.36968 | gap 1 GTATCGCCTGATCCA TACTGCAATCGCGGTGGTGGGC-GCG TCA TGCTGCCCACCACCGCGAACGCGGCA TTCTACGCTTGCGTG XOO3391 3610734 - 3609718 - | transposase TERM 2775 3609849 - 3609833 - G 74 -10.1 -3.70902 | opp_overlap 3609828, overlap 3609834 CGGGTCAGATCGAAA CGGCGGT TGA ACCGCCA CATCGTCTCTGCCAG TERM 2776 3610582 - 3610567 - G 74 -4.6 -4.55697 | ACGCGGACAAACAAA GCCCTG TGGC CAGCGC GAGATCTCCAACGCC XOO3392 3610746 - 3611198 + | hypothetical protein pepN 3614289 - 3611563 - | aminopeptidase N acrF 3617709 - 3614584 - | acriflavin resistance protein XOO3395 3618662 - 3617706 - | RND efflux membrane fusion protein nodQ 3621190 - 3619211 - | bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein TERM 2777 3620978 - 3620954 - G 81 -12.9 -3.62597 | opp_overlap 3620934 3620944 CTGATCGTCGAACAA GCGCTTGCTGT CGT ACAGCAACCGC CCGATCAAGGTGCTC raxP 3622095 - 3621187 - | sulfate adenylyltransferase subunit 2 cysJ 3622276 - 3623529 + | NADPH-sulfite reductase flavoprotein subunit cysI 3624248 - 3625954 + | sulfite reductase subunit beta TERM 2778 3626498 - 3626474 - g 70 -4.9 -4.38712 | GTGAGCGCTACAAAA TCAGCCCCATC GCC GACTGGACCGA TCGCGACGTGTGGCA cysH 3625951 - 3626676 + | phosphoadenosine phosphosulfate reductase XOO3402 3628422 - 3626812 - | hypothetical protein fecA 3630464 - 3628404 - | TonB-dependent receptor TERM 2779 3629520 - 3629499 - G 79 -6.5 -4.4648 | opp_overlap 3629501 ACCTGCAGCAGAAAA CCGCACCCA GCGC TGATTGCGG TAGTCGTTCTGGTAG TERM 2780 3629573 - 3629619 + g 77 -12.8 -3.31792 | opp_overlap 3629586 GCTCACCGAGCTCGC CGTCCGCATGCAACGCGGTCTG ACG CAGGCGGCGCTGGCTGCGGTCG TTCTGCGCATAGTCC XOO3404 3631108 - 3630602 - | hypothetical protein XOO3405 3631362 - 3632558 + | sensor histidine kinase TERM 2781 3632708 - 3632724 + T 72 -2.1 -4.69053 | overlap 3632701 3632710 CGCCGTCCGCGCCCG CCTTGCG GCT CGCTACG TTTTGTTAGCTGCTC TERM 2782 3632778 - 3632750 - T 100 -18.2 -5.75342 | TGCTCTGAAAAAAAA GCGGATCCGGGC TCCCG ACCCGGATCCGC CACCAAACACGCCAG XOO3406 3633910 - 3633629 - | hypothetical protein cysB 3634904 - 3633921 - | transcriptional regulator CysB-like protein TERM 2783 3634815 - 3634770 - G 80 -8.2 -4.3587 | gap 1, opp_overlap 3634775, overlap 3634771 CACGAACAACAGAAA GCCCAGCTCGTCC-TCCAGCT GCTTG AGCTGCTTGGACAGGCCGGGC TGGGTCGCGTGCACG TERM 2784 3634935 - 3634923 - H 86 -4.7 -5.1287 | overlap 3634924 CTCATATCCAAAAAA GGCGC GAC GCGCT ACAAGGACTTCGACT cysG 3635073 - 3636278 + | siroheme synthase cysK 3636295 - 3637254 + | cysteine synthase TERM 2785 3637284 - 3637298 + F 100 -12.8 -5.75342 | opp_overlap 3637283 3637284 TGCCGAGGGATGAAG CCGCGC GAT GCGCGG TTTTTTTTCGACCGA XOO3410 3637554 - 3638060 + | hypothetical protein XOO3411 3638208 - 3638795 + | hypothetical protein TERM 2786 3638863 - 3638880 + T 84 -14.1 -3.76839 | opp_overlap 3638863 TCGTGTTGAAGCAAA GGGCGCC GCAA GGCGCCC TTTGCATTCGCGTTG TERM 2787 3638880 - 3638863 - T 86 -14.1 -3.90112 | opp_overlap 3638863 TCGTGTTGAAGCAAA GGGCGCC GCAA GGCGCCC TTTGCATTCGCGTTG TERM 2788 3638925 - 3638956 + T 100 -17.4 -4.09685 | opp_overlap 3638931, overlap 3638931 CATAGATGCCACACG CAAAAACGCCGGCA TCGC TGCCGGCGTTTTCG TTTTCAGCGATGCAA TERM 2789 3638931 - 3638950 + T 100 -15 -4.67038 | opp_overlap 3638931, overlap 3638925 TGCCACACGCAAAAA CGCCGGCA TCGC TGCCGGCG TTTTCGTTTTCAGCG TERM 2790 3638950 - 3638931 - T 100 -15 -4.70659 | opp_overlap 3638931 3638925 TGCCACACGCAAAAA CGCCGGCA TCGC TGCCGGCG TTTTCGTTTTCAGCG XOO3412 3640001 - 3638997 - | fructose-bisphosphate aldolase TERM 2791 3639846 - 3639867 + g 74 -2.2 -4.71776 | gap 1, opp_overlap 3639846 3639848, overlap 3639849 GGGCGTGGTCAGCAA CAGTTCGCG GTAGG CGCGA-CGG TTTTCTTCGATGTTC TERM 2792 3640534 - 3640509 - R 84 -16.9 -2.69468 | opp_overlap 3640499, overlap 3640512 CATCGCCACACAGCA CAACGGCGACC CTGG GGTCGCCGCTG CGTGTCACGTCTTCC TERM 2793 3640531 - 3640512 - R 83 -15 -3.49777 | opp_overlap 3640499, overlap 3640509 CGCCACACAGCACAA CGGCGACC CTGG GGTCGCCG CTGCGTGTCACGTCT pykA 3642140 - 3640584 - | pyruvate kinase idgB 3642951 - 3642307 - | indigoidine synthesis-like protein TERM 2794 3642982 - 3642934 - G 93 -11 -4.70659 | GTCCAGATCGAAAAA CAGC-GTGGCTGCACTCACTGACC GCG GGCCTGC-AGTGCGGCCACAGCCG GCAAGGTCTTGCCTT pgk 3644123 - 3642948 - | phosphoglycerate kinase XOO3416 3645911 - 3644457 - | hypothetical protein XOO3417 3648835 - 3645812 - | hypothetical protein TERM 2795 3648012 - 3647974 - GH 80 -13.8 -3.37464 | overlap 3647975 CGACCAATGCGAGAA CGCTGATGCCGGCCAAGC GCA GCTCGATCGGCATCCGCA TCCAGCCCTGGTCGC TERM 2796 3648011 - 3647975 - GH 77 -15.1 -2.62157 | overlap 3647974 GACCAATGCGAGAAC GCTGATGCCGGCCAAGC GCA GCTCGATCGGCATCCGC ATCCAGCCCTGGTCG XOO3422 3650446 - 3650619 + | oxidoreductase katE 3650837 - 3652942 + | catalase TERM 2797 3653216 - 3653171 - f 100 -19.1 -3.86346 | opp_overlap 3653174, overlap 3653174 CCAGTTCGCGATAAA GCACCCTGACGCGAGCGAC GTTTACCT GTCGCTCGCGTCAGGGTTA TGTGGCACGTTCAAG TERM 2798 3653174 - 3653213 + F 100 -25.9 -3.494 | opp_overlap 3653171 3653174 GTTCGCGATAAAGCA CCCTGACGCGAGCGACG TTTACC TGTCGCTCGCGTCAGGG TTATGTGGCACGTTC TERM 2799 3653213 - 3653174 - f 100 -25.2 -3.00946 | opp_overlap 3653174, overlap 3653171 GTTCGCGATAAAGCA CCCTGACGCGAGCGAC GTTTACCT GTCGCTCGCGTCAGGG TTATGTGGCACGTTC XOO3424 3653216 - 3655006 + | hypothetical protein XOO3425 3657366 - 3655234 - | hypothetical protein TERM 2800 3655424 - 3655440 + g 84 -6.5 -4.72846 | overlap 3655437 TGGAGCGCGCGCAGC CCGGTGG ACG TTACCGG TTTTTCGGTATGTAC XOO3426 3659624 - 3657483 - | hypothetical protein TERM 2801 3657673 - 3657689 + g 84 -6.5 -4.72846 | overlap 3657686 TGGAGCGCGCGCAGC CCGGTGG ACG TTACCGG TTTTTCGGTATGTAC TERM 2802 3660242 - 3660273 + r 80 -5.6 -4.69053 | overlap 3660245 3660265 3660267 GCCGATTCCGAGCAC CTGCCGCGCCCGCC TGGC GGTGAGCGCAGTCG TTTTGTTGGCTGCTC XOO3427 3661182 - 3660457 - | AraC/XylS family transcriptional regulator TERM 2803 3660730 - 3660712 - G 75 -7.4 -4.2349 | CTTGGACATGGAAAA TCCGGTGA TCT CCACCAGA GCCTGCATGCGGACG XOO3428 3661775 - 3661314 - | hypothetical protein XOO3429 3662085 - 3661825 - | IS1595 transposase XOO3430 3662328 - 3662116 - | IS1595 transposase XOO3431 3662355 - 3663389 + | IS1478 transposase XOO3432 3663409 - 3663816 + | IS1478 transposase TERM 2804 3663854 - 3663882 + T 91 -17.4 -3.36878 | CTTTACCTTGCGCGA CCGACACGCCGC GCCTG GCGGCGTGCCGG TTGTCCGTCACTGGC XOO3433 3666010 - 3663890 - | alanyl dipeptidyl peptidase TERM 2805 3665382 - 3665324 - G 80 -14.5 -3.05384 | gap 2, opp_overlap 3665324 3665326 GTCGTTGCCACCGAA CGGCTTGGACGGCGCATCGCCGGCCAGCG TGG CGCTGATCGCCGACGCCCCGACCA--CCG CTTTTGCACCCGCTG TERM 2806 3665326 - 3665383 + g 85 -12.5 -4.08216 | gap 1, opp_overlap 3665324, overlap 3665324 CGTTGCCACCGAACG GC-TTGGACGGCGCATCGCCGGCCAGCG TGG CGCTGATCGCCGACGCCCCGACCACCGC TTTTGCACCCGCTGC TERM 2807 3665649 - 3665688 + g 81 -9.2 -4.30576 | AGTTGCTGCGGGGTG CCGCCGGCCATCGGCT GCGCGTAG AGCTGCTGGCTGCCGG TTTTGCTGCTGAGGA TERM 2808 3666105 - 3666153 + r 89 -16.1 -3.53012 | gap 2, opp_overlap 3666086 GAGGGCACGCGACAC GCCGTCGAGCGCGCCCATGCCGC TGCCT GCGGCATGGGCG-GCT-GAGAGC TTTAGAGCGGCGACC XOO3434 3667380 - 3666277 - | hypothetical protein TERM 2809 3667220 - 3667250 + g 93 -5.5 -5.42259 | gap 2 CGCGGTATGGCGGCG CTGCACTTGATCGGC AGT GCTG--CAAGTGCGG TTTTTTTCAGGGTGG TERM 2810 3667962 - 3667934 - R 76 -10.9 -3.68366 | opp_overlap 3667948, overlap 3667930 GCACCGGAAAATCAA CCGAGATGCCGCA GCG CGCGGCCTGTCGG CAGTGAGTCATTCGC oliA 3670217 - 3668247 - | oligopeptide transporter TERM 2811 3670292 - 3670243 - H 85 -5.6 -5.08824 | gap 2, overlap 3670244 CCTGTAGGCAAAAAA TCCGCACCAC-GCTAG-CGCCTGT GCCG ACGCGCGTCCAGCTGCGGCGCGGC GTGACAGTGTGCGCG XOO3436 3670646 - 3672043 + | endoproteinase Arg-C XOO3437 3673076 - 3672156 - | hypothetical protein XOO3438 3673271 - 3673077 - | prolyl oligopeptidase family protein TERM 2812 3673237 - 3673225 - G 74 -4.8 -4.53303 | GATTTGGACAGAAAA GCCA GCAGT TGGC AATAGAACGCACATT dnaE2 3676536 - 3673285 - | DNA polymerase III alpha chain TERM 2813 3674164 - 3674143 - G 72 -3.6 -4.63218 | opp_overlap 3674141 GCTGGCCGAATAAAA GCCCATCG GCTGTG CGTTGAGC AGCCCGCAGGCGAAT XOO3440 3678136 - 3676718 - | hypothetical protein XOO3441 3678796 - 3678146 - | hypothetical protein lexA 3679403 - 3678798 - | LexA repressor XOO3443 3679553 - 3679774 + | hypothetical protein doc 3679814 - 3680284 + | death-on-curing protein XOO3445 3680685 - 3681056 + | putative transposase XOO3446 3681022 - 3681498 + | putative transposase XOO3447 3682575 - 3681955 - | hypothetical protein XOO3448 3683594 - 3682575 - | hypothetical protein uidR 3683542 - 3684198 + | uid family transcriptional regulator YXOOp01 3684492 - 3684259 - | hypothetical protein XOO3450 3686089 - 3685343 - | hypothetical protein TERM 2814 3686447 - 3686419 - H 78 -11.8 -3.82031 | gap 2, overlap 3686421 TCAATGATGATGAAA CAGACGCAGCCGGC ATC GCC-GCTGCGTC-G CTGCTGGTGCCAGCG TERM 2815 3686446 - 3686421 - H 85 -15.5 -3.4914 | gap 1, overlap 3686419 AATGATGATGAAACA GACGCAGCCGGC ATC GCC-GCTGCGTC GCTGCTGGTGCCAGC TERM 2816 3687541 - 3687489 - g 91 -7 -5.00616 | overlap 3687490 3687493 TTTTGCTGGAAAAAA TCGACGGCA-TCAGCGTGCGCAGC ATGATTG GCCGCGCACGCAGAGCGCTG-CAA CAAGGCGCCATCACC TERM 2817 3687982 - 3688021 + G 84 -8.4 -4.56597 | opp_overlap 3687981, overlap 3687983 GCTGGACGATGGAAC CGGCGAGCGCACCAAGGC CGAG GTCTTGCTGCGCGCCCCC TTTTTCACCGAAACG TERM 2818 3687983 - 3688020 + G 73 -11.9 -3.33744 | opp_overlap 3687981, overlap 3687982 CTGGACGATGGAACC GGCGAGCGCACCAAGGC CGAG GTCTTGCTGCGCGCCCC CTTTTTCACCGAAAC stkXac1 3687275 - 3688102 + | serine/threonine kinase TERM 2819 3688229 - 3688203 - T 74 -5.1 -4.65895 | gap 1, opp_overlap 3688218 3688227, overlap 3688215 CGCGGTATTGAAAAA CACGTGAG-GCA AGTG TGCGCGCACGCG CGCAGTCTGCGCGCT TERM 2820 3688227 - 3688243 + T 72 -13.7 -2.72379 | opp_overlap 3688203 3688215, overlap 3688218 CAAGTGTGCGCGCAC GCGCGCA GTC TGCGCGC TGATTCGGGCATTCA TERM 2821 3688473 - 3688441 - T 71 -4.8 -4.53303 | gap 1, opp_overlap 3688462 3688463 TAGCTCCAGACAAAA CGCCAACTCGTCCAT GCAG ATGGCCG-GCTGCCG CGCCTGCTCTTCGGC TERM 2822 3688820 - 3688798 - T 85 -3.4 -5.36441 | opp_overlap 3688816, overlap 3688799 CGCGGACACAAAAAA CCCACC GGTTTGTCGGA GGTGGG TACCGCTGTTAGCGG XOO3452 3691550 - 3688896 - | type I restriction-modification system endonuclease TERM 2823 3690271 - 3690307 + g 75 -9.5 -3.99678 | gap 1 ACCGCGCCCAGCGTG TCGTCATCGCTGTGCC AGTGCG GGCGCAGCT-TGACGA TTTCGTTATAAAGGT TERM 2824 3692092 - 3692123 + r 75 -3.8 -4.81212 | gap 1 GCTCTGCTCCTCATC GGAAAGTGGTTGTTG TAC CGG-AACGACTTTCC TTTTGTTCTCCTCGA XOO3454 3693497 - 3693324 - | hypothetical protein TERM 2825 3694497 - 3694512 + r 75 -3.9 -4.78149 | TCTCCATCTTGCAGT CCGCT GATGAA GGCGG TTTTTCCATTCTCGA TERM 2826 3694894 - 3694866 - R 72 -3.7 -4.59773 | overlap 3694867 3694869 TCCGATTCGGAAAAA TCATCGGCCAGCG CCG CGCTGATCGACAG CGACAAGGGCTGATC hsdM-1 3697443 - 3695506 - | type I restriction system adenine methylase TERM 2827 3695984 - 3695962 - GR 70 -2.6 -4.63218 | overlap 3695965 3695967 CTGCGTGGAATAAAA CAATTGCCCT GGC AGGGCGACCA TGCAGTCGACCACAC TERM 2828 3695981 - 3695965 - GR 76 -6.5 -4.43307 | overlap 3695962 3695967 CGTGGAATAAAACAA TTGCCCT GGC AGGGCGA CCATGCAGTCGACCA XOO3458 3698402 - 3697338 - | hypothetical protein XOO3459 3698691 - 3698383 - | hypothetical protein XOO3460 3699039 - 3698698 - | hypothetical protein TERM 2829 3699151 - 3699118 - H 82 -6 -4.82154 | gap 1, overlap 3699106 3699120 AACGCACAGGAAAAA CT-TGCGCAGCTACC AACAA GGTCGCTGCGGACAG CCCAAGCCATCGCAT hsdR 3699193 - 3702765 + | type I restriction enzyme EcoKI subunit R XOO3462 3702677 - 3703903 + | abortive infection bacteriophage resistance protein hsdM-2 3703950 - 3705494 + | type I restriction-modification system, M subunit TERM 2830 3706003 - 3705978 - g 80 -8.9 -4.371 | GCTAGCAGAGCAAAA GCGCATCGCGC AGAA GCTGGATGCGC TGCTGGCCCAGGTCG XOO3464 3705472 - 3706866 + | Type I restriction enzyme StySPI specificity protein XOO3465 3707208 - 3706900 - | hypothetical protein TERM 2831 3707177 - 3707159 - G 73 -12.4 -3.36694 | opp_overlap 3707158 3707159, overlap 3707157 AGCCAGTCGTAAAGA CGCACGAG ATC CTCGCGCG CTTGCTGCGTGAAGC YXOOp02 3707478 - 3707215 - | hypothetical protein TERM 2832 3707626 - 3707612 - H 73 -7 -4.3898 | opp_overlap 3707612, overlap 3707614 AGCAGCCCTAGAAAA CGCTCC AAC GGTGCG TTGTCGTGGCAGTTG TERM 2833 3707671 - 3707686 + H 73 -8.2 -4.07568 | GCTGCACACCAAGCC GTGGGG TAAT CCCCGC TTTTAGCGGACGCCA TERM 2834 3707867 - 3707911 + H 91 -9.2 -4.63932 | gap 1, opp_overlap 3707843 ACGCGTGGTCCATGC CGATTCCGGGCACCGGCCGCG GCCG CGTGG-CGGTGAGCGCAGTCG TTTTGTTAGCCGCTC XOO3466 3708207 - 3708962 + | hypothetical protein XOO3467 3710278 - 3709256 - | hypothetical protein TERM 2835 3709952 - 3709931 - G 79 -5.9 -4.62783 | opp_overlap 3709923 CACGTACCGGAAAAA TTCGTTCTT AAGC AAGAGCGAA TAAAGCAAAAACCCC TERM 2836 3709977 - 3709964 - G 79 -2.3 -5.09521 | CGAATAAAGCAAAAA CCCCA TAAA TGCGG AAAACGCTGCAACAG TERM 2837 3710106 - 3710086 - G 79 -6.1 -4.66002 | overlap 3710087 CACCAATAAAAACAA TGGACATGT TCA ACATGCCCC TATACAAAAATCTAC XOO3468 3713155 - 3710288 - | hypothetical protein TERM 2838 3711199 - 3711183 - G 81 -13.7 -3.53012 | GTCGCTTCGCTGAAA CTGCGCG TGC CGCGCAG ATCCACCATCCGCAG TERM 2839 3712977 - 3712994 + g 76 -2.7 -4.94902 | CTGGCGATATCGTCA GGAAG CGAAAAAT CTTCC TTTTTCTGCTCCTTC XOO3472 3718045 - 3716033 - | hypothetical protein TERM 2840 3719126 - 3719109 - R 75 -4.1 -4.77036 | CGCCACCATCAAAAA CCTAAGA ATGC TCATAGG TACCTCAAAGATCCT XOO4882 3720123 - 3719245 - | hypothetical protein XOO3473 3721191 - 3720130 - | hypothetical protein XOO3474 3722894 - 3721305 - | hypothetical protein TERM 2841 3722960 - 3722943 - R 81 -14.1 -3.55444 | CGCCTAGCGGCCAAA GGCCGCG CGAG CGCGGCC TGGCGGGTGGCGCGT YXOOp03 3723340 - 3722987 - | hypothetical protein TERM 2842 3723194 - 3723161 - G 71 -13.7 -2.77899 | opp_overlap 3723179, overlap 3723158 GCGCTGCATCAACGA GGCCAGCACGCGCGC ATCG GCGCGCGCGTCGGCG GACGCCTTGCTCAGC clpB 3726100 - 3723371 - | ClpB TERM 2843 3723448 - 3723471 + g 75 -12.4 -3.53012 | TGCCGCCTTCGGCCA TCGCCGCGAG CACG CTCTCGGCGA TTTCCGGCAACAGCG XOO3476 3727277 - 3726186 - | hypothetical protein XOO3477 3729076 - 3727241 - | hypothetical protein XOO3478 3729567 - 3729079 - | hypothetical protein TERM 2844 3729705 - 3729678 - R 79 -13.5 -3.53012 | CGCGCGGCGCGGAAA TGCGATGACGC GCGAAG GCGCCATCGCA AAACAAACATCAAAC hcp 3730212 - 3729715 - | hypothetical protein TERM 2845 3730251 - 3730271 + r 73 -8.9 -3.98913 | overlap 3730252 TTCCGTGAGATTGAT GTGCCAGGC AGG GCCTGGCGG TTATTTGCCTGTCCC XOO3480 3731850 - 3730354 - | hypothetical protein TERM 2846 3730741 - 3730777 + g 77 -12.2 -3.66844 | opp_overlap 3730759 CTTCTTCGGCTTCTG CGCCGACTGCGCACCG AAGAA CGCCGCGTAGTCGGTG TTCTTGCAATGTACC XOO3481 3732354 - 3731854 - | hypothetical protein XOO3482 3733015 - 3732401 - | hypothetical protein XOO3483 3733231 - 3733884 + | putative transmembrane protein TERM 2847 3734911 - 3734936 + G 80 -14.7 -3.04792 | opp_overlap 3734890 3734908 3734905 CCGGTACAACCACGC GGCGCCGGAAG CCTG CTTCCAGCGCC TGTTCCAGATCGTGC XOO3484 3734036 - 3735370 + | hypothetical protein XOO3485 3735367 - 3736158 + | hypothetical protein XOO3486 3736169 - 3738706 + | hypothetical protein TERM 2848 3740146 - 3740117 - g 89 -5 -5.20534 | opp_overlap 3740122, overlap 3740119 3740123 3740125 ACCAAGGAAGAAAAA GACAAGTACCCG CGCCGC CAGGTACTCGTT CCCAGCGGCGCGCCG TERM 2849 3740144 - 3740119 - g 75 -7.6 -4.21997 | opp_overlap 3740122, overlap 3740117 3740123 3740125 CAAGGAAGAAAAAGA CAAGTACCCG CGCCGC CAGGTACTCG TTCCCAGCGGCGCGC TERM 2850 3740335 - 3740311 - g 82 -5.5 -4.74453 | overlap 3740324 CAAGACACTGAAAAA GGTCGCGACCG AAC CGGACGGCACC CGCTGGTGGGAAGTG TERM 2851 3740855 - 3740835 - g 77 -5.4 -4.67353 | gap 2, overlap 3740836 3740838 GGAGCGACGTAAAAA CCACTCCGGC TTT GCCGG-G-GG ATGCCAAGGTTTATG TERM 2852 3741242 - 3741230 - g 76 -5.5 -4.53419 | TACGACAAGAAGAAA TGCAG GCG CCGCA ACCAGATCATACAAG XOO3487 3738731 - 3741625 + | EF hand domain-containing protein TERM 2853 3741866 - 3741847 - f 81 -6.4 -4.7458 | ATCACAATAAATAAA GACGACTC TATT GAGCCATC GGAATTCATCATCGG XOO3488 3742460 - 3743893 + | hypothetical protein TERM 2854 3745810 - 3745831 + G 82 -5.9 -4.84359 | gap 1, overlap 3745813 3745815 CTCATCCGACCTCGA TCACGCTGGA GAA TCCAGTG-GA TTTTTCTGGGCATCC XOO3489 3743897 - 3746152 + | hypothetical protein TERM 2855 3746252 - 3746266 + F 71 -8.6 -3.86252 | opp_overlap 3746247 3746239 CACGGGGAAATGCTA TCCTTC ACT GAAGGA TTATATTTCCTCGGC TERM 2856 3746943 - 3746885 - g 74 -13 -3.20382 | gap 3, opp_overlap 3746922 3746923, overlap 3746886 TGGCACAGCGAGCAA GTGCGCGCGGTCGGCGCGCAGGCCCAGGC CCAG GCCGAGGCCGGCGCGCTG-CCGC-CGCT- GGAGGTCTACGTGCA TERM 2857 3746943 - 3746886 - g 89 -19 -2.52015 | gap 2, opp_overlap 3746922 3746923, overlap 3746885 GGCACAGCGAGCAAG TGCGCGCGGTCGGCGCGCAGGCCCAGGC CCAG GCCGAGGCCGGCGCGCTG-CCGC-CGCT GGAGGTCTACGTGCA TERM 2858 3746923 - 3746972 + G 71 -14.2 -2.71712 | opp_overlap 3746885 3746886, overlap 3746922 CCAGGCCCAGGCCGA GGCCGGCGCGCTGCCGC-CGCTGG AGGT CTA-CGTGCAGCCGCGCGCCGGGC GTTTCGCCCAGGAGG XOO3490 3746714 - 3748975 + | hypothetical protein XOO3491 3751166 - 3752389 + | ISxac1 transposase XOO3492 3752416 - 3752955 + | hypothetical protein XOO4885 3753076 - 3753369 + | hypothetical protein YXOOp04 3754099 - 3754446 + | hypothetical protein TERM 2859 3754972 - 3754997 + G 80 -14.7 -3.04792 | opp_overlap 3754951 3754969 3754966 CCGGTACAACCACGC GGCGCCGGAAG CCTG CTTCCAGCGCC TGTTCCAGATCGTGC XOO3493 3754541 - 3755431 + | hypothetical protein XOO3494 3755428 - 3756219 + | hypothetical protein TERM 2860 3757029 - 3756978 - g 70 -13.6 -2.52015 | gap 2, opp_overlap 3757008 3757009, overlap 3756977 GGCACAGCGAGCAAG TGCGCGCGGTCGGCGCGCAGGCCC AGGCCG AGGCCGGCGCGCTG-CCGC-CGCT GGAGGTCTACGTGCA TERM 2861 3757009 - 3757058 + G 71 -14.2 -2.71712 | opp_overlap 3756978 3756977, overlap 3757008 GCAGGCCCAGGCCGA GGCCGGCGCGCTGCCGC-CGCTGG AGGT CTA-CGTGCAGCCGCGCGCCGGGC GTTTCGCCCAGGAGG XOO3495 3756230 - 3757396 + | hypothetical protein XOO3498 3758994 - 3758605 - | VGR-related protein XOO3499 3761257 - 3758975 - | hypothetical protein TERM 2862 3759641 - 3759622 - GR 74 -15 -2.62184 | TTTCGCCCCACACCA GCGCGACG ATGT CGTCGCGC GCGGCGATCGGTGCC TERM 2863 3760562 - 3760613 + gr 72 -12.9 -3.09933 | gap 1, overlap 3760565 CCATGTCTGCACGCG TTGCCGCAGCTG-CGCGCGGCGCT CGGCC AGCACGGCGCGGCGGCCGCGGTGA TTCGGTGGATTCAAG TERM 2864 3760565 - 3760610 + gr 75 -14.6 -2.76189 | gap 1, overlap 3760562 TGTCTGCACGCGTTG CCGCAGCTG-CGCGCGGCGCT CGGCC AGCACGGCGCGGCGGCCGCGG TGATTCGGTGGATTC TERM 2865 3760850 - 3760884 + gr 71 -10.7 -3.445 | gap 1, opp_overlap 3760849, overlap 3760859 CAACGCCCAGCAGAT CCGCGCCTCGCCGC CCCAGCCT GCGGCCAGGC-CGG CTTTTTCCTGGATCC TERM 2866 3760859 - 3760885 + gr 93 -9.2 -4.7497 | opp_overlap 3760849, overlap 3760850 GCAGATCCGCGCCTC GCCGCCCCAGCC TGC GGCCAGGCCGGC TTTTTCCTGGATCCC XOO3500 3761802 - 3761206 - | hypothetical protein TERM 2867 3761636 - 3761648 + gr 71 -9.1 -3.74251 | opp_overlap 3761628 CCGAACAGGCTCAGG CCGAC CGT GTCGG TTTCCTGGGCCTGTG XOO3501 3762670 - 3761795 - | hypothetical protein TERM 2868 3762998 - 3763056 + r 81 -15.9 -3.05384 | CGGCCGTCCACCGCC GCGGCCAGC-ACGCCGATTGCCTGGCCGC TGT GCAGCCGGGCG-TCGCCGGCGATGGCCGC TTCGCTGCCCGCGCC XOO3503 3764609 - 3763083 - | VGR-related protein XOO3504 3765293 - 3764610 - | hypothetical protein XOO3505 3765389 - 3766435 + | sulfatase modifying factor 1 precursor (C-alpha-formyglycine-generating enzyme 1) XOO3506 3769554 - 3766489 - | ATPase involved in DNA repair TERM 2869 3767269 - 3767259 - G 85 -5.4 -4.99043 | overlap 3767260 TCGCCATAAACAAAA GTTG CGA CAAC GCCAAGAACGCATCC TERM 2870 3767757 - 3767797 + g 90 -15.4 -3.64487 | gap 1 CGAAGTTCGACGCCA GGCTGTCGGTGCGGTCGCG CGCC TGCGGCTGCACCGTC-GCC TTGTTGCCGCTGTAC XOO3507 3770086 - 3769541 - | hypothetical protein XOO3508 3772000 - 3770168 - | hypothetical protein XOO4887 3772254 - 3771997 - | hypothetical protein XOO3509 3772964 - 3772500 - | hypothetical protein XOO4888 3773538 - 3773281 - | hypothetical protein YXOOp05 3773764 - 3773582 - | hypothetical protein XOO3510 3774249 - 3773785 - | hypothetical protein XOO3511 3775199 - 3774246 - | hypothetical protein TERM 2871 3774751 - 3774764 + g 79 -2.3 -5.06816 | CATTCTTCAATGGCA GCGGT GAAT ACGGC TTTTTGTTCGGCGGT TERM 2872 3775173 - 3775191 + g 72 -13.2 -3.04792 | opp_overlap 3775150 3775147 GGGGTTCCTTGGCGC GCTGCATC CAG GATGCAGC TCTTGCAACTGCTGC TERM 2873 3775518 - 3775576 + H 93 -19.5 -3.05384 | CCGCCGTCCACCGCC GCGGCCAGC-ACGCCGATCGCCTGGCCGC TGT GCAGCCGGGCG-TCGCCGGCGATGGCCGC TTCGCTGCCCGCGCC TERM 2874 3779754 - 3779716 - g 77 -12.4 -3.61398 | overlap 3779717 3779719 CCCGGCCGCGAACAA GGACGCGCCG-CCGGCGC CACGC GAGCCGGGCGGCGCA-CC GACCACCCGCAAGGA TERM 2875 3779754 - 3779717 - g 75 -14.8 -2.76696 | gap 1, overlap 3779716 3779719 CCGGCCGCGAACAAG GACGCGCCG-CCGGCGC CACGC GAGCCGGGCGGCGCACC GACCACCCGCAAGGA TERM 2876 3779752 - 3779719 - g 75 -13.8 -2.93073 | gap 1, overlap 3779716 3779717 GGCCGCGAACAAGGA CGCGCCG-CCGGCGC CACGC GAGCCGGGCGGCGCA CCGACCACCCGCAAG XOO3514 3778907 - 3779968 + | hypothetical protein XOO3515 3780833 - 3780021 - | Outer membrane protein and related peptidoglycan-associated (lipo)proteins XOO3516 3781819 - 3780836 - | hypothetical protein TERM 2877 3781212 - 3781261 + g 76 -9.1 -4.15044 | gap 1, overlap 3781213 TTGTCCACCGACACG TTGCCGCCGGCG-AGGATCGGCTG CAG CAGCAGGCCCAGTGCCGGCAGCAG TTTCTTCAACGACAC TERM 2878 3781620 - 3781591 - G 71 -13.6 -2.71924 | overlap 3781590 GACTGGGCTGGAAAT GCCCGCACAGCA CCATCT TGCTGCGCGAGC CCAGGAACGCGTAGT XOO3517 3785553 - 3781816 - | hypothetical protein TERM 2879 3782679 - 3782656 - G 74 -13.2 -3.19389 | gap 1, opp_overlap 3782655 3782654 3782658, overlap 3782648 CAACGGACGCAGCAA CAGCG-GACGC ATC GCGTCGCGCTG GGTTTCATCCAGCCC YXOOp06 3787050 - 3785569 - | hypothetical protein TERM 2880 3786758 - 3786738 - G 87 -18.3 -2.72344 | GCGCACCGGCAAGCA CTGCCGGCG CGG CGCCGGCAG TCGGCGCCAGCGCCT XOO3518 3788358 - 3787480 - | hypothetical protein YXOOp07 3789463 - 3789356 - | hypothetical protein YXOOp08 3789579 - 3790115 + | IS1246, transposase purT 3791628 - 3790315 - | phosphoribosylglycinamide formyltransferase 2 XOO3520 3791726 - 3792124 + | hypothetical protein XOO3521 3792134 - 3792418 + | hypothetical protein TERM 2881 3792465 - 3792429 - g 100 -2.8 -5.49729 | gap 1 AATGAGCGAAAAAAA GGCCTAC-CCGCTGCGT ATCA ACGCCGATGTGTTGGCC GCCGTGCAGCGCTGG XOO3522 3792415 - 3792594 + | hypothetical protein XOO3523 3792725 - 3793522 + | hypothetical protein XOO3524 3794260 - 3793586 - | DNA-3-methyladenine glycosylase XOO3525 3794667 - 3794263 - | hypothetical protein TERM 2882 3794695 - 3794674 - R 100 -17.3 -5.78622 | opp_overlap 3794674 GTAGCGCAAAAAAAA CGCGCCGCA GGGC TGCGGCGCG TTTTCGGTCTGGATC TERM 2883 3794674 - 3794695 + r 100 -17.3 -4.24204 | opp_overlap 3794674 GTAGCGCAAAAAAAA CGCGCCGCA GGGC TGCGGCGCG TTTTCGGTCTGGATC XOO3526 3795912 - 3794731 - | hypothetical protein XOO3527 3796907 - 3796263 - | two-component system regulatory protein TERM 2884 3796858 - 3796873 + g 74 -10.4 -3.78775 | AACAGCGAGCGGATC CCCTGG CGCA CCAGGG TTTGATCGTCGACCA XOO3528 3798100 - 3796904 - | two-component system sensor protein XOO3529 3798345 - 3798941 + | hypothetical protein minC 3798907 - 3799686 + | septum formation inhibitor TERM 2885 3800427 - 3800387 - g 71 -10.4 -3.62522 | gap 2, overlap 3800388 CAACGCCTCCAACAA GGGCGAGCCGGTGATCCTGG ATG CC-GAATCCCCGGC-CGGCC AGGCGTATGACGACG minD 3799683 - 3800531 + | septum site-determining protein minE 3800534 - 3800791 + | cell division topological specificity factor MinE TERM 2886 3800833 - 3800792 - f 89 -16.8 -3.44622 | gap 2, opp_overlap 3800799 3800802, overlap 3800793 3800802 GACGGCGACAAGTAA GCGCCAACAACGGCACCGCG TTCG CACGGTGCCGTTGTTG-C-C TGTGACCCGACCGCG TERM 2887 3800834 - 3800793 - f 90 -19.5 -2.66452 | opp_overlap 3800799 3800802, overlap 3800792 3800802 ACGGCGACAAGTAAG CGCCAACAACGGCACCGCG TTCG CACGGTGCCGTTGTTGCCT GTGACCCGACCGCGA TERM 2888 3800799 - 3800828 + F 91 -17.9 -3.12351 | opp_overlap 3800792 3800793 3800802, overlap 3800802 ACAAGTAAGCGCCAA CAACGGCACCGCG TTCG CACGGTGCCGTTG TTGCCTGTGACCCGA TERM 2889 3800825 - 3800802 - f 91 -16 -3.65581 | opp_overlap 3800799 3800802, overlap 3800792 3800793 AGTAAGCGCCAACAA CGGCACCGCG TTCG CACGGTGCCG TTGTTGCCTGTGACC TERM 2890 3800802 - 3800825 + F 84 -13.8 -3.70773 | opp_overlap 3800802 3800792 3800793, overlap 3800799 AGTAAGCGCCAACAA CGGCACCGCG TTCG CACGGTGCCG TTGTTGCCTGTGACC XOO3533 3800854 - 3801351 + | hypothetical protein colS 3802831 - 3801503 - | two-component system sensor protein colR 3803711 - 3802788 - | two-component system regulatory protein XOO3536 3803729 - 3805456 + | hypothetical protein TERM 2891 3806181 - 3806193 + G 86 -9.1 -4.52589 | opp_overlap 3806180 3806181 GTGTTGCACAACAAC TGCGC GGC GCGCA TTTTCTCTCGCACGA XOO3537 3805535 - 3806320 + | hypothetical protein yjdB 3806317 - 3807987 + | inner membrane protein TERM 2892 3808296 - 3808280 - g 71 -10.1 -3.57144 | opp_overlap 3808285, overlap 3808263 CGGCCTATCCGGAAA CCACCGC CGC GCAGTGG CTGTCGTCGACCTAT TERM 2893 3809837 - 3809825 - g 83 -9.1 -4.38712 | opp_overlap 3809833, overlap 3809827 TCCAGTTCTACAAAA GCCTG TGC CAGGC CGCTGGCCATCAGGG XOO3539 3808057 - 3810117 + | dipeptidyl carboxypeptidase XOO3540 3810603 - 3810199 - | hypothetical protein TERM 2894 3810744 - 3810732 - R 93 -2.6 -5.5604 | CCAAGCAAGAAAAAA CCGG TCATG CCGA TCGCCAGGTCCCGTG TERM 2895 3811038 - 3811006 - R 100 -23.6 -2.78816 | CCACCCCGCAGCAGA TGGAGCCGATGCGG ATCTG CCGCATCGGCTCCA TGCACCCGGACAAGA raxB 3814164 - 3811945 - | putative ABC transporter protein RaxB TERM 2896 3813728 - 3813707 - GR 76 -5.7 -4.58395 | overlap 3813708 GCGATCCCGGAAAAA TGCCGAGCG AATT CACCCGGCG TGAGCACACGTGGCC raxA 3815420 - 3814101 - | putative membrane fusion protein RaxA TERM 2897 3814881 - 3814916 + gr 74 -13.2 -3.21099 | overlap 3814896 GTCGACCTGCTCCAG GCGGTTGCGCAGGC CGGCCAGC GCCCGCGCGGCCGC TTGCTGCTGCAAGCG TERM 2898 3815218 - 3815202 - GR 78 -2.9 -4.87665 | CCCCAGGCAGAAAAA TCCCACC AGC AGCAGGA TCACCGTTGCCATCA TERM 2899 3815361 - 3815331 - GR 91 -14.6 -3.90744 | opp_overlap 3815336 3815339 3815351 CTCGCGCCGAAACAA GCGCGTCATCGGCC GGC GGCCGCCGACGCCC CGGCGTGCTGTCCAC raxST 3816605 - 3816075 - | putative sulfotransferase RaxST TERM 2900 3816739 - 3816718 - H 78 -2.9 -5.07053 | gap 1, overlap 3816719 3816720 3816729 AACCACTCGAAAAAA TCGCC-CACC AAG GGTGCGGCAT CGCTGCAGCGGCCCG TERM 2901 3817005 - 3816966 - H 100 -22.2 -3.55761 | CAGCGAGCGCTGAAA CCCTGGAGGCCGGACCAG GCGA CTGGTTCGGCCTCCAGCG GCTCATGACCCCGCG TERM 2902 3817204 - 3817217 + H 74 -5.2 -4.64766 | opp_overlap 3817195 3817191, overlap 3817191 AACGCAGGCGGGCCA CGCG CCTTGA CGCG TTTTTAAACTCTCAG TERM 2903 3817716 - 3817677 - g 95 -15 -4.11371 | overlap 3817678 CAACATCCTGGAAAA CCCCGCCTGGTACACCGC CTAC ACGCCGTACCAGGCGGAA ATCTCGCAAGGCCGC TERM 2904 3817715 - 3817678 - g 85 -16.3 -3.06341 | overlap 3817677 AACATCCTGGAAAAC CCCGCCTGGTACACCGC CTAC ACGCCGTACCAGGCGGA AATCTCGCAAGGCCG TERM 2905 3819593 - 3819572 - g 74 -11.5 -3.66178 | CCGGCGAAGGTCAAA CTGCCGCCA TCCA TGGCGGCGG ATTCAACTCCGGAAG gcvP 3817279 - 3820308 + | glycine dehydrogenase TERM 2906 3820361 - 3820340 - f 100 -17.3 -4.59982 | opp_overlap 3820340 GTAGAACTAAAGAAA CCCCAGCCG GGGA CGGCTGGGG TTTTTCGTGCCGCAC TERM 2907 3820340 - 3820361 + F 100 -17.3 -4.72272 | opp_overlap 3820340 GTAGAACTAAAGAAA CCCCAGCCG GGGA CGGCTGGGG TTTTTCGTGCCGCAC TERM 2908 3820947 - 3820920 - g 85 -17 -3.14881 | GAACTGCTGGACCAA GCCAGCCGGCAA CCGG TCGCCGGCCGGC GCGTGCGCCTGAGCA XOO3548 3820638 - 3821087 + | hypothetical protein XOO3549 3821084 - 3821779 + | hypothetical protein TERM 2909 3822063 - 3822045 - g 74 -11 -3.59979 | CCGGTGCAGTTCAAA CGCGCAAA GCC CTTGCGCG ACTGGCTACTGAAAC XOO3550 3821859 - 3822857 + | hypothetical protein TERM 2910 3823365 - 3823405 + G 70 -7.3 -4.02736 | overlap 3823403 TTTTCGTCGACTTTG CCCGTCGCCTCAGGGCCGA GCA TGGGCATGGCGGCTACGGG TTTGTACTCTCACTT XOO3551 3822944 - 3823939 + | hypothetical protein TERM 2911 3824253 - 3824270 + T 72 -4 -4.61482 | overlap 3824248 3824254 GCTGGGCATAGGCCG CCGGCG TCATTC CGCCGA TTGTTTTTTGGGGCG XOO3552 3825185 - 3824259 - | IS1404 transposase TERM 2912 3824722 - 3824745 + g 75 -4.5 -4.59773 | gap 1, opp_overlap 3824721 GTGGGCCGCAGCAAC GGCGCACGCT CGCCT AGCG-GCACC TTTTTACGCGTGCGG XOO3553 3826308 - 3825340 - | hypothetical protein TERM 2913 3825369 - 3825395 + g 71 -7.3 -4.18494 | gap 1, overlap 3825369 CAACGCTGTTGAGGA C-CTCCTCGGAG AAGA CTTCGAGGGGCG TTTTGAATCCAAGTA TERM 2914 3826809 - 3826778 - g 100 -2.9 -5.86061 | overlap 3826800 GCGCATTAAAAAAAA CGGCCCACAATCC ATCGGG AAATCGCGGGGCG GATGGAACACCAAAA XOO3554 3826426 - 3826872 + | transposase TERM 2915 3828339 - 3828309 - g 71 -11.9 -3.2794 | gap 1 GTGGAGCTACACCAA GCGCA-CGGGCG TGGCGTGG CGCCCGCTGCGC AGTGGCGAGAAGCTG XOO3556 3827389 - 3828456 + | putative transposase TERM 2916 3828564 - 3828534 - T 70 -12.1 -3.1364 | gap 1, opp_overlap 3828542, overlap 3828542 CATCCAACCAGCCAA TAAAAAAACCCGGC GTGC GCCGGGTTTTTT-A GAGAATCTTTACAGA TERM 2917 3828542 - 3828557 + T 100 -11.8 -5.02476 | opp_overlap 3828534 3828542 CAGCCAATAAAAAAA CCCGGC GTGC GCCGGG TTTTTTAGAGAATCT TERM 2918 3828557 - 3828542 - T 100 -11.8 -5.8187 | opp_overlap 3828542, overlap 3828534 CAGCCAATAAAAAAA CCCGGC GTGC GCCGGG TTTTTTAGAGAATCT rplQ 3828973 - 3828590 - | 50S ribosomal protein L17 TERM 2919 3829144 - 3829121 - R 100 -14.6 -4.97405 | ATGTAGAAAAACAAA CATGGGCGCC CGAA GACGCCCATG CGGTGATGCATTAAC rpoA 3830153 - 3829155 - | DNA-directed RNA polymerase subunit alpha TERM 2920 3829869 - 3829851 - G 83 -14.6 -3.28791 | opp_overlap 3829856 3829857, overlap 3829856 ACCCTGCTTGGACAA CGACAGCG TGG CGCTGTCG CCACTGTGCATGCGA TERM 2921 3830045 - 3830018 - G 75 -12 -3.50808 | gap 1, overlap 3830016 TCGACGACAACAACA CACGACGCAGGGC ATT GCCCAGCGT-GTG CCCGTAACCGCGCTC TERM 2922 3830174 - 3830192 + r 72 -11.7 -3.3514 | GGGGTCTCCTGCGAA CCTCCGG CAGTA CCGGAGG TTCTCCAATGTGAAT rpsD 3830833 - 3830207 - | 30S ribosomal protein S4 TERM 2923 3831099 - 3831087 - R 74 -10.5 -3.71527 | overlap 3831059 CGCGAACCACGGAAA CCGGC GCC GCCGG ACGTAGCCCACGACA rpsM 3831608 - 3831252 - | 30S ribosomal protein S13 secY 3833305 - 3831941 - | preprotein translocase subunit SecY TERM 2924 3833107 - 3833077 - G 78 -3.8 -4.75174 | overlap 3833079 3833084 CATTCAACGCAAAAA TACTGAAGCGGTGC AGG GCGCCGCCCGAGAA CATGTTGAACATGTC rplO 3833756 - 3833313 - | 50S ribosomal protein L15 rpmD 3833952 - 3833761 - | 50S ribosomal protein L30 rpsE 3834487 - 3833945 - | 30S ribosomal protein S5 rplR 3835005 - 3834646 - | 50S ribosomal protein L18 TERM 2925 3835074 - 3835053 - R 78 -10.1 -4.07568 | opp_overlap 3835053 GCGCTCCTGTCAAAA GTCCGCACA CGGA TGTGCGGGC TCTTGCGGGGGACTC rplF 3835621 - 3835094 - | 50S ribosomal protein L6 TERM 2926 3836190 - 3836159 - R 71 -13.8 -2.66435 | opp_overlap 3836159 3836162, overlap 3836164 AGCGGGAGTATACGA CAAAAGAGCCCGAC TTGC GTCGGACTCCCTTG TTTAACAGAACCATC TERM 2927 3836185 - 3836164 - R 100 -12.3 -4.52047 | opp_overlap 3836162 3836159, overlap 3836159 GAGTATACGACAAAA GAGCCCGAC TTGC GTCGGACTC CCTTGTTTAACAGAA TERM 2928 3836234 - 3836215 - R 73 -11.4 -3.5393 | opp_overlap 3836214 ACCATCCTGTTCAAA TCCGGCCG CGAA CGGCCGAA ATGCTATTACCAGCT rpsN 3836546 - 3836241 - | 30S ribosomal protein S14 rplE 3837107 - 3836565 - | 50S ribosomal protein L5 rplX 3837436 - 3837119 - | 50S ribosomal protein L24 TERM 2929 3837401 - 3837415 + g 70 -5.6 -4.25458 | CTTGCCGGTGTTGAT GACGAC CTG GTCGCC TTTCTTGATACGGTT rplN 3837820 - 3837452 - | 50S ribosomal protein L14 rpsQ 3838104 - 3837835 - | 30S ribosomal protein S17 TERM 2930 3838047 - 3838079 + g 72 -7 -4.27965 | gap 2, opp_overlap 3838058, overlap 3838048 3838074 TCTTGTCCATCTTGT TGCTGACGACACGGCC TTC GACCGTG-CG-CAGCG TTTGCTTTTCGTTAT TERM 2931 3838074 - 3838084 + g 72 -3.2 -4.59414 | overlap 3838048 3838047 GGCCTTCGACCGTGC GCAG CGT TTGC TTTTCGTTATTGTCG rpmC 3838301 - 3838116 - | 50S ribosomal protein L29 rplP 3838714 - 3838301 - | 50S ribosomal protein L16 rpsC 3839454 - 3838720 - | 30S ribosomal protein S3 TERM 2932 3839305 - 3839330 + g 71 -10.5 -3.56594 | gap 1 GATCTTGCTGACACC TGCCTGCGCGAG CTT CTTGCGCAG-CA TTTCACGCACTTTCA TERM 2933 3839448 - 3839458 + g 79 -6.8 -4.564 | TCGGATGAACTTTAT GACC CAT GGTC TTTTCCTTTCCGCTT rplV 3839813 - 3839472 - | 50S ribosomal protein L22 rpsS 3840089 - 3839820 - | 30S ribosomal protein S19 rplB 3840923 - 3840096 - | 50S ribosomal protein L2 rplD 3841835 - 3841230 - | 50S ribosomal protein L4 rplC 3842498 - 3841848 - | 50S ribosomal protein L3 TERM 2934 3842979 - 3842949 - R 100 -14.1 -4.56597 | gap 1, overlap 3842953 TCCTCCGCCCAAAAA CTGAGGCAGACCGG TAAA CCGGCCTGCCT-AG ACGGAAAAGTATAGT TERM 2935 3842976 - 3842953 - R 83 -16 -2.83903 | overlap 3842949 CCGCCCAAAAACTGA GGCAGACCGG TAAA CCGGCCTGCC TAGACGGAAAAGTAT TERM 2936 3844559 - 3844542 - R 91 -6.9 -5.27335 | opp_overlap 3844542 GCGGGCAAAGAAAAA GGCCGGC TTTC ACCGACC TTCTCGTTCCCGTGG TERM 2937 3844566 - 3844605 + r 89 -16.4 -3.42809 | TCACCGACCTTCTCG TTCCCGTGGCACGGCAGC CGAA GCTGCCGTGCTGCAGGCA TTACTTGATGATCTT tufB 3845796 - 3844606 - | elongation factor Tu fusA 3847963 - 3845846 - | elongation factor G TERM 2938 3847996 - 3848025 + r 75 -13.5 -3.05384 | overlap 3847995 CTTGGATTTCGGATG GCCGAACGCCGCC TTTC GGCGGCCTTCGGA TTGGATGCGACGCAA YXOOp09 3848569 - 3848102 - | 30S ribosomal protein S7 rpsL 3848956 - 3848582 - | 30S ribosomal protein S12 TERM 2939 3849027 - 3849006 - R 93 -9.3 -4.72007 | overlap 3849010 3849018 CTGCACGAAAACAAA GGCAGGCCG AAAC CGGCCGACC GAGACAGAAAAGTAT TERM 2940 3849131 - 3849111 - R 73 -8.2 -4.08767 | opp_overlap 3849112, overlap 3849112 TCCAGGGCCGGAAAA CGGAGGGC CTCCT GCCCTCCT TTTCGCTTGGCTTAC TERM 2941 3849112 - 3849130 + r 91 -11.7 -4.29845 | opp_overlap 3849112 3849111 CCAGGGCCGGAAAAC GGAGGGC CTCCT GCCCTCC TTTTCGCTTGGCTTA rpoC 3853392 - 3849175 - | DNA-directed RNA polymerase subunit beta' TERM 2942 3853519 - 3853472 - R 71 -11.3 -3.48024 | gap 1, opp_overlap 3853486, overlap 3853470 3853475 TGGGATCAGGAAACA GTACCCTGGAAGAG-CGAACGC ACTGG GCGCTCGTCTCTTCCGGGTTGC CCGCCCCTGACCGGG TERM 2943 3853515 - 3853475 - R 77 -14.9 -2.88215 | opp_overlap 3853486, overlap 3853470 3853472 GATCAGGAAACAGTA CCCTGGAAGAG-CGAACGC ACTGG GCGCTCGTCTCTTCC-GGG TTGCCCGCCCCTGAC rpoB 3857694 - 3853543 - | DNA-directed RNA polymerase subunit beta TERM 2944 3857227 - 3857215 - G 74 -4.7 -4.56597 | overlap 3857217 GTCGTGGTCGAAAAA CACGC CCG GCGAG CGATGCAGCTGCGAC TERM 2945 3857931 - 3857899 - R 76 -12.7 -3.53091 | opp_overlap 3857924, overlap 3857916 3857919 3857924 ATGCCGCCTCTCAAA TCCCGGCTTTCCATC AAC GACCGAAGGCCGGGA GCGTTACGCTCCCAG TERM 2946 3857955 - 3857916 - R 100 -21.6 -3.14132 | gap 1, opp_overlap 3857924, overlap 3857899 3857919 3857924 CCGGCTTTCCATCAA CGACCGAAGGCCGGGAGCG TTA CGCTCCCAGCCTTCAGT-G CATCACCATGAAACG TERM 2947 3857953 - 3857919 - R 100 -24.4 -2.77899 | opp_overlap 3857924, overlap 3857899 3857916 3857924 GCTTTCCATCAACGA CCGAAGGCCGGGAGCG TTA CGCTCCCAGCCTTCAG TGCATCACCATGAAA TERM 2948 3857924 - 3857948 + r 88 -17.1 -3.07816 | opp_overlap 3857899 3857919 3857916 3857924 CCATCAACGACCGAA GGCCGGGAGCG TTA CGCTCCCAGCC TTCAGTGCATCACCA TERM 2949 3857948 - 3857924 - R 93 -19.3 -3.14136 | opp_overlap 3857924, overlap 3857899 3857919 3857916 CCATCAACGACCGAA GGCCGGGAGCG TTA CGCTCCCAGCC TTCAGTGCATCACCA rplL 3858359 - 3857991 - | 50S ribosomal protein L7/L12 rplJ 3858947 - 3858414 - | 50S ribosomal protein L10 TERM 2950 3858759 - 3858816 + g 100 -21.4 -2.72344 | opp_overlap 3858798 3858801, overlap 3858770 ATCAGTACCTTCAAC GGCTCGCGCAGCCAGGGTGTTCTTGA CAACTT TCAAGAACACGCCGGTTTCGCGGGCC TGCTTACGCATCGCG TERM 2951 3859325 - 3859340 + r 70 -10.4 -3.56643 | overlap 3859321 TCGTCGATCTGCGCT GACCGC GCCT GCGGTC TTTGACGGCTATCGC TERM 2952 3859412 - 3859383 - R 73 -8.5 -4.08216 | opp_overlap 3859340, overlap 3859384 3859402 CGATCGCCTTCAAAA TGTCCGTTACCCC AAAG GAGGGAACGGACT CCCAGCACACGGTGA TERM 2953 3859485 - 3859463 - R 100 -15.6 -4.59773 | opp_overlap 3859461 3859457 3859456 CTGTACTGCCAAAAA CGTCAGGCGC ATC ACGCCTGACG CATTCGATTACTTCA rplA 3860191 - 3859493 - | 50S ribosomal protein L1 rplK 3860623 - 3860195 - | 50S ribosomal protein L11 nusG 3861431 - 3860820 - | transcription antitermination protein NusG secE 3861801 - 3861391 - | preprotein translocase subunit SecE TERM 2954 3861637 - 3861601 - GR 83 -7.2 -4.55887 | GCCCAAAAACACAAA TGCGCCCGCTACCAAC CCAAC GATGACAGCCAGCGCA CGCAACTGCGGCGTC TERM 2955 3861993 - 3861958 - R 74 -10.5 -3.7014 | gap 1, opp_overlap 3861958 CAAACCCTAAGACAA CGAA-GGCGGACCG CGGTTCAGC CGGCCCGCCATTCG TTTGAGTCCAACCAC tufB 3863222 - 3862032 - | elongation factor Tu TERM 2956 3863335 - 3863348 + r 73 -6.7 -4.32482 | GCTCTACCGACTGAG CTACG TGAG CGTAG TTTTGCATTATGCCT TERM 2957 3863612 - 3863628 + r 76 -7.9 -4.29302 | GAGGCGAATTCAGTT CGGGGTG AAG CAGCCCG TTATTTTGCTGTGCG ychF 3864813 - 3863722 - | translation-associated GTPase pth 3865472 - 3864888 - | peptidyl-tRNA hydrolase TERM 2958 3865420 - 3865393 - G 80 -12.1 -3.79668 | gap 1, opp_overlap 3865398, overlap 3865398 AGGGAATCGACGAAA CG-AAACCCGGC GTTAT GCCGGGTTTGCG CGTGTTCCTGGCCCG TERM 2959 3865398 - 3865414 + g 74 -11.5 -3.61328 | opp_overlap 3865393 3865398 ATCGACGAAACGAAA CCCGGCG TTA TGCCGGG TTTGCGCGTGTTCCT TERM 2960 3865414 - 3865398 - G 79 -10.8 -4.10953 | opp_overlap 3865398, overlap 3865393 ATCGACGAAACGAAA CCCGGC GTTAT GCCGGG TTTGCGCGTGTTCCT TERM 2961 3865480 - 3865523 + r 95 -18.2 -3.43071 | gap 1, opp_overlap 3865472, overlap 3865481 GCAGACATGCCAGTC ACCGC-AGCCGATCCCTCGCG CAA TGCGAGGAATCGGCTGGCGGA TTACTTGGTCTCGGC TERM 2962 3865481 - 3865522 + r 100 -21.7 -2.65521 | gap 1, opp_overlap 3865472, overlap 3865480 CAGACATGCCAGTCA CCGC-AGCCGATCCCTCGCG CAA TGCGAGGAATCGGCTGGCGG ATTACTTGGTCTCGG rplY 3866159 - 3865524 - | 50S ribosomal protein L25/general stress protein Ctc TERM 2963 3866231 - 3866204 - R 70 -12 -3.14132 | CCTCGCGGCGATGAA GCGTCTCACCCG CGAC CAGGTGAGACGT GTAGCGGCACCCGGA XOO3603 3867309 - 3866269 - | ribose-phosphate pyrophosphokinase ipk 3868323 - 3867436 - | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase TERM 2964 3867652 - 3867615 - G 75 -12 -3.55444 | gap 1 TGCCGACCCTGGAAA GCGCCTGGAACACTGCC TCGAC GGCAG-GTTCGCGGCGC CGCAGAACCGGCTCG lolB 3868958 - 3868305 - | outer membrane lipoprotein LolB XOO3606 3870652 - 3868955 - | hypothetical protein TERM 2965 3870528 - 3870565 + g 77 -8.9 -4.21974 | overlap 3870531 ACGGGTTCCAGCGAG GTGACGCCGGCACTGCC GGTC GGCGGAGCGGGCGGTGC TTTCTTGGGTGCTGC TERM 2966 3871396 - 3871422 + G 70 -5.1 -4.37092 | gap 1 CTAACCGATCTGGAA CGCCACCT-GGC CGAG GCCGACGTGGTG TTTTCTGCCACCGCT hemA 3870709 - 3872007 + | glutamyl-tRNA reductase TERM 2967 3872113 - 3872080 - g 72 -9 -3.9461 | gap 2 CGTGGTCAACAACAA CGACAAGTTCCGCACG TTGT CGCGC-GAACT-GTCG CAACTGGAGCCGGTC prfA 3871985 - 3873070 + | peptide chain release factor 1 TERM 2968 3874675 - 3874690 + G 72 -6.8 -4.2349 | gap 1, opp_overlap 3874675 CGTCTGGCTGAACAA CGCCTGC ACA GC-GGCG TTTTCGATATGGACG XOO3609 3873067 - 3874773 + | hypothetical protein TERM 2969 3874875 - 3874895 + F 78 -6.7 -4.64334 | AGCATCGGCCGCGAC CGCCTGGCG ACT CCCCATGCG TTTTGTTAGCCGCTT moaB 3875239 - 3875757 + | molybdopterin biosynthesis protein B XOO3611 3875790 - 3876572 + | transcriptional regulator XOO3612 3877783 - 3876554 - | hypothetical protein acyP 3878138 - 3877869 - | acylphosphatase yneN 3878737 - 3878135 - | thioredoxin rbn 3880011 - 3878734 - | fused ribonuclease BN/uncharacterized domain-containing protein TERM 2970 3879980 - 3879993 + g 81 -3.1 -5.00616 | overlap 3879981 TCGCGCAGACGTTCC TTCCA TTGG TGGAG TTTTTTCACACGCGA XOO3617 3880430 - 3880720 + | tryptophan repressor binding protein XOO3616 3880717 - 3881268 + | tryptophan repressor binding protein XOO3618 3882447 - 3881275 - | xylanase aspG 3883009 - 3883494 + | asparaginase XOO3620 3883499 - 3883912 + | transcriptional regulator XOO3622 3884673 - 3884521 - | extracellular protease XOO3623 3884919 - 3884686 - | extracellular protease YXOOp10 3885054 - 3885311 + | hypothetical protein TERM 2971 3885626 - 3885603 - T 100 -12.4 -5.63517 | opp_overlap 3885602 3885603 TCCGCAAACAAAAAA GCCCCCGTGC TGAC ACACGGAGGC GCTTGTTTGACGAAA ilvE 3886736 - 3885651 - | branched-chain amino acid aminotransferase XOO3625 3887355 - 3886801 - | hypothetical protein XOO3626 3887482 - 3887961 + | hypothetical protein TERM 2972 3888116 - 3888094 - f 89 -11.3 -4.27259 | gap 1, opp_overlap 3888093, overlap 3888083 GAGATACATGGAAAA GCGCTGC-GC CTTT GCTGCAGCGC CCTTGCCCGCCCACC TERM 2973 3888281 - 3888269 - f 76 -9.1 -3.97444 | opp_overlap 3888269 3888266 3888261, overlap 3888257 AGAGCAGCAAGCAAA CTGCG CAA CGCAG TGCCTTTGTTCTTGA XOO3627 3888491 - 3888862 + | putative transposase pntB 3890705 - 3889218 - | pyridine nucleotide transhydrogenase subunit beta TERM 2974 3890652 - 3890640 - G 71 -9.1 -3.71848 | opp_overlap 3890631 3890651 CTCGGGCAGGAACAA GGTCG CGG CGACC AGGTAACTGGTTTTG pntA 3891046 - 3890702 - | pyridine nucleotide transhydrogenase subunit alpha TERM 2975 3891358 - 3891397 + GH 87 -14.9 -3.61103 | overlap 3891359 GCTGTTCTGGAGCAT CCTGCGCCGCCGCATCA TCGACC TGCAGCGGCGGCGCAGC TTTCGCCTGAAATTC TERM 2976 3891359 - 3891396 + GH 87 -18.4 -2.7634 | overlap 3891358 CTGTTCTGGAGCATC CTGCGCCGCCGCATCA TCGACC TGCAGCGGCGGCGCAG CTTTCGCCTGAAATT XOO3631 3891029 - 3891706 + | RNA polymerase factor sigma-70 XOO3632 3891703 - 3892053 + | hypothetical protein YXOOp11 3892209 - 3892544 + | hypothetical protein pntA 3894141 - 3892942 - | pyridine nucleotide transhydrogenase TERM 2977 3893614 - 3893581 - G 91 -10.3 -4.60487 | gap 1, opp_overlap 3893582 3893583, overlap 3893582 3893583 CAGCATCGGGAAAAA GCGCGGCGCCAGTTGC GCG GCAAGTAGCACCGC-C TTGTAGCCGGCCATG TERM 2978 3893613 - 3893583 - G 70 -14 -2.61004 | opp_overlap 3893583 3893582, overlap 3893581 3893582 GCATCGGGAAAAAGC GCGGCGCCAGTTGC GCG GCAAGTAGCACCGC CTTGTAGCCGGCCAT TERM 2979 3893746 - 3893698 - G 77 -12.5 -3.59979 | gap 3, overlap 3893708 3893723 GCGCTCCAGTGGAAA CAC-GATCAGA-GCGCGCGC-GGC AAAC GCCTGCGCGCGCGCCGGATCCGCG TCCGGCGACAGCATG TERM 2980 3893734 - 3893708 - G 87 -17.3 -2.8789 | gap 1, overlap 3893698 3893723 GGAAACACGATCAGA GCGCGCGC-GGC AAAC GCCTGCGCGCGC GCCGGATCCGCGTCC XOO3634 3895593 - 3894232 - | putative ISXo8 transposase XOO3635 3896719 - 3895787 - | putative transposase TERM 2981 3896020 - 3896009 - G 76 -2.2 -4.8622 | overlap 3896010 GGCGGCAATGAAAAA TGCA GCCT CGCA GCTCTGCAACTCGTC XOO3636 3899161 - 3896822 - | hypothetical protein TERM 2982 3896977 - 3896967 - G 77 -4.6 -4.68424 | overlap 3896968 GAAGCGACGCAAAAA CGCA CGC CGCG CCGATTAACGAACAG TERM 2983 3897185 - 3897208 + g 75 -4.5 -4.66833 | gap 1, overlap 3897187 CGGCGGCGGCAGGTT GACCTG-CGG CAGCT CCGGCAGGGC TTTTTCCAGTTCCGG TERM 2984 3897705 - 3897726 + g 79 -10.1 -4.183 | opp_overlap 3897683 AGGTTCTCGTTGAAT TCGGCGACC AGGC GGTCGACGA TTTCTTCGACCTTGC XOO3637 3899397 - 3900104 + | hypothetical protein exo 3900101 - 3901087 + | exodeoxyribonuclease IX TERM 2985 3901373 - 3901358 - g 71 -3.9 -4.4634 | overlap 3901359 AACTGGAAGAAGAAA CCGGC TGGACT GCCGA GCATGCCGAAGTACT XOO3639 3901084 - 3901635 + | MutT-like protein XOO3640 3901616 - 3902413 + | hypothetical protein pip 3903556 - 3902615 - | proline imino-peptidase, chain A YXOOp12 3904778 - 3904452 - | hypothetical protein XOO3643 3905220 - 3904822 - | hypothetical protein TERM 2986 3905387 - 3905399 + r 75 -3.3 -4.91712 | CCTGCAGCGTTGCAA GCGCA TGG TCCGC TTTTTCTGACTTAAA hemK 3906303 - 3905458 - | protoporphyrinogen oxidase TERM 2987 3906108 - 3906070 - G 84 -14.6 -3.30124 | gap 1, overlap 3906071 GTCCAGCGTCCAGAA TCCGCGCGAGCCGGTCA GGTAGG CGACCGGCTCGC-CGGC CTCGCGGCGCTGCAC TERM 2988 3906107 - 3906071 - G 86 -18.1 -2.57931 | gap 1, overlap 3906070 TCCAGCGTCCAGAAT CCGCGCGAGCCGGTCA GGTAGG CGACCGGCTCGC-CGG CCTCGCGGCGCTGCA ahpC 3906505 - 3907068 + | alkyl hydroperoxide reductase subunit C ahpF 3907210 - 3908856 + | alkyl hydroperoxide reductase subunit F TERM 2989 3909005 - 3909021 + G 74 -10.1 -3.76224 | CACAAGCACTTCGGC CGCGCTG CGA CAGCGTG TTTCGTGAGTCAGCC TERM 2990 3909073 - 3909062 - g 70 -5.8 -4.29508 | ACCCAGATCAAGAAA CTCG AAGA CGAG CTCGGCGTGTCGCTG oxyR 3908948 - 3909889 + | oxidative stress transcriptional regulator TERM 2991 3909963 - 3909991 + F 76 -10.4 -3.96224 | gap 1, opp_overlap 3909967, overlap 3909966 3909967 GGTGCCTTTGTCGAA CAAA-GGCGACGC GAAA GTGTCGCCGTTTG TTTGTGCATCGTTTG TERM 2992 3909966 - 3909987 + F 83 -7.9 -4.57482 | opp_overlap 3909967, overlap 3909963 3909967 GCCTTTGTCGAACAA AGGCGACGC GAAA GTGTCGCCG TTTGTTTGTGCATCG TERM 2993 3909986 - 3909967 - f 79 -9.2 -4.15044 | opp_overlap 3909967 3909966 3909963 CCTTTGTCGAACAAA GGCGACGC GAAA GTGTCGCC GTTTGTTTGTGCATC rnk 3910316 - 3910747 + | regulator of nucleoside diphosphate kinase TERM 2994 3911584 - 3911571 - g 71 -8.1 -4.08216 | GGACCTGCTGGAAAA GCTCG ACGC CGAGC ACGGCGAACTGCCGC talB 3910810 - 3911778 + | transaldolase B TERM 2995 3911801 - 3911838 + F 81 -11.9 -3.91144 | overlap 3911804 3911807 AAGGCTGTTCTGCGA CATCGATGCCCGCAGCC TGCC GGCTGTGGGCGTTGTCG TTTGTAGGGTCTGAC TERM 2996 3911804 - 3911835 + F 84 -16.6 -3.02186 | overlap 3911801 3911807 GCTGTTCTGCGACAT CGATGCCCGCAGCC TGCC GGCTGTGGGCGTTG TCGTTTGTAGGGTCT TERM 2997 3911807 - 3911832 + F 85 -14.7 -3.64915 | overlap 3911804 3911801 GTTCTGCGACATCGA TGCCCGCAGCC TGCC GGCTGTGGGCG TTGTCGTTTGTAGGG XOO3650 3912028 - 3912441 + | putative ISXo8 transposase XOO3651 3912723 - 3912442 - | transposase TERM 2998 3912573 - 3912557 - G 74 -10.1 -3.70902 | opp_overlap 3912552, overlap 3912558 CGGGTCAGATCGAAA CGGCGGT TGA ACCGCCA CATCGTCTCTGCCAG TERM 2999 3913306 - 3913291 - H 74 -4.6 -4.55697 | ACGCGGACAAACAAA GCCCTG TGGC CAGCGC GAGATCTCCAACGCC XOO3654 3913502 - 3914698 + | putative ISXo8 transposase XOO3656 3914840 - 3915418 + | hypothetical protein TERM 3000 3915709 - 3915680 - T 95 -10.7 -4.67011 | overlap 3915682 AACGCTACTCAAAAA GATGGCCACGTCG TCTC CGACGTCGCCATT CAAGTTGCCCGGCAT TERM 3001 3915707 - 3915682 - T 83 -13.3 -3.94812 | overlap 3915680 CGCTACTCAAAAAGA TGGCCACGTCG TCTC CGACGTCGCCA TTCAAGTTGCCCGGC pms 3916499 - 3915834 - | methionine sulfoxide reductase A XOO3658 3917155 - 3916580 - | hypothetical protein TERM 3002 3917442 - 3917396 - g 80 -13.7 -3.34398 | gap 2, overlap 3917394 GCTGGGCCTGAAACA TGGCGCGGTACTGGCGCAGCGCG GCC CGCGC-GCGCAAGTGCTG-GCCA GCCGTGGCCGTGCCC XOO3659 3917313 - 3917831 + | two-component system regulatory protein XOO3660 3918423 - 3917875 - | putative ISXo8 transposase XOO3661 3918936 - 3918589 - | putative transposase XOO3662 3919312 - 3918902 - | putative transposase XOO3663 3919804 - 3919409 - | hypothetical protein grxC 3920169 - 3919801 - | glutaredoxin TERM 3003 3920362 - 3920330 - g 70 -5.5 -4.25283 | gap 1, opp_overlap 3920348, overlap 3920331 ACCTGCGCAGGAAAA CCGCCTGCCCGACA TCGGCT CGTCGGCC-GGCGA GTTGCTGACCCCGGC TERM 3004 3921085 - 3921056 - g 84 -6.4 -4.82667 | gap 1, overlap 3921059 CGAGCAGATGAAAAA GAACACCGTGGTG CTGAC CACCTCGGTGC-C GGGTGGAAGCCGCCA TERM 3005 3921083 - 3921059 - g 91 -11.4 -4.50988 | overlap 3921056 GCAGATGAAAAAGAA CACCGTGGTG CTGAC CACCTCGGTG CCGGGTGGAAGCCGC TERM 3006 3921316 - 3921299 - g 73 -5.5 -4.4261 | overlap 3921300 3921301 TCGCGAATACGAAAA CCTGCGC CGCA GCGCAAA GCAAGGCTTGAGCGA XOO3665 3920259 - 3921905 + | hypothetical protein TERM 3007 3922362 - 3922352 - g 72 -6.8 -4.25104 | opp_overlap 3922360, overlap 3922353 GCGCGGTGAGGAAAA CGAC CGC GTCG GCGGCCTGGAAGCCG phoB 3922086 - 3922775 + | two-component system regulatory protein TERM 3008 3922815 - 3922787 - f 85 -14.5 -3.53811 | CTGACGTGCCGTAAA GCCCCCCGGCC GCGTTCT GGCCGGGTGGC TGCCTACCTGACGCT phoR 3922833 - 3924176 + | two-component system sensor protein ppk 3924292 - 3926394 + | polyphosphate kinase ppx 3926467 - 3928092 + | exopolyphosphatase gtrB 3928297 - 3929433 + | glycosyl transferase XOO3671 3929414 - 3929956 + | hypothetical protein XOO3672 3930604 - 3931347 + | UDP-2,3-diacylglucosamine hydrolase XOO3673 3931946 - 3931527 - | hypothetical protein TERM 3009 3932058 - 3932034 - R 100 -12.8 -4.62069 | opp_overlap 3932034 3932036, overlap 3932035 GGTGTAGCGTAAAAA CGCCCGGCAC GTGCG GTGCCGGGCC AGGTTTGGATCACTC TERM 3010 3932057 - 3932035 - R 88 -16.3 -3.3692 | opp_overlap 3932034 3932036, overlap 3932034 GTGTAGCGTAAAAAC GCCCGGCAC GTGCG GTGCCGGGC CAGGTTTGGATCACT XOO3674 3933851 - 3933015 - | hypothetical protein TERM 3011 3933962 - 3933993 + r 70 -10.1 -3.66018 | opp_overlap 3933981, overlap 3933938 CGCGACCAATCGGCC GCGTCGCCGCG GTAATTCAGG CGCGACGACGC TTCTTGGCATCGTCC purF 3935444 - 3933978 - | amidophosphoribosyltransferase TERM 3012 3935509 - 3935527 + r 76 -10.2 -3.85698 | overlap 3935510 GCCTGGCCTGGGGAC TCGACCCG AGC CGGGTCGC TTTCTCCGCCGCGAA TERM 3013 3935510 - 3935526 + r 74 -13.7 -2.91276 | overlap 3935509 CCTGGCCTGGGGACT CGACCCG AGC CGGGTCG CTTTCTCCGCCGCGA cvpA 3936228 - 3935680 - | colicin V production protein XOO3678 3937519 - 3936437 - | hypothetical protein TERM 3014 3936702 - 3936666 - G 93 -14.4 -4.13945 | gap 1, overlap 3936667 3936670 AGCTGTACTGCAAAA CCGACCGCACTGGCCGC AGGC GCTGCCGGTGCGGT-GG CCACCGGCTTGGCAG TERM 3015 3936702 - 3936667 - G 80 -14.6 -3.08046 | overlap 3936666 3936670 GCTGTACTGCAAAAC CGACCGCACTGGCCGC AGGC GCTGCCGGTGCGGTGG CCACCGGCTTGGCAG TERM 3016 3936699 - 3936670 - G 75 -14.9 -2.75577 | overlap 3936666 3936667 GTACTGCAAAACCGA CCGCACTGGCCGC AGGC GCTGCCGGTGCGG TGGCCACCGGCTTGG folC 3939002 - 3937587 - | folylpolyglutamate synthase; dihydrofolate synthase pgmA 3940561 - 3939857 - | phosphoglycerate mutase XOO3681 3942827 - 3940593 - | hypothetical protein XOO3682 3944965 - 3942989 - | non-hemolytic phospholipase C TERM 3017 3943288 - 3943255 - GH 74 -4.6 -4.58283 | gap 2, overlap 3943256 3943257 3943259 GAATTCGCGCAAAAA GCCATTCGGCCCATGC AAAC GCATGGGC-GTAC-GC ACCGTTCTGCGTGGC fecA 3944871 - 3947288 + | TonB-dependent receptor tdh 3947791 - 3948825 + | L-threonine 3-dehydrogenase TERM 3018 3948844 - 3948873 + T 100 -22.3 -3.09878 | opp_overlap 3948851, overlap 3948851 CACAAACCGCTTGAA CGCAAAAGGCGCC CGAG GGCGCCTTTTGCG TGTTCGCTCAGTGCA TERM 3019 3948851 - 3948866 + T 91 -11.8 -4.28656 | opp_overlap 3948851, overlap 3948844 CGCTTGAACGCAAAA GGCGCC CGAG GGCGCC TTTTGCGTGTTCGCT TERM 3020 3948866 - 3948851 - T 91 -11.8 -4.27316 | opp_overlap 3948844 3948851 CGCTTGAACGCAAAA GGCGCC CGAG GGCGCC TTTTGCGTGTTCGCT XOO3685 3949608 - 3948895 - | hypothetical protein cysA 3951002 - 3949962 - | sulfate ABC transporter ATP-binding protein cysW 3951957 - 3951004 - | ABC transporter sulfate permease cysU 3952814 - 3951954 - | ABC transporter sulfate permease sbp 3953915 - 3952818 - | ABC transporter sulfate binding protein kbl 3954006 - 3955214 + | 2-amino-3-ketobutyrate coenzyme A ligase XOO3693 3956420 - 3955560 - | pseudouridylate synthase TERM 3021 3956463 - 3956514 + r 90 -19.5 -2.52464 | gap 3 TCTCGACCGGCTTGG CGTC-GGCCGCAGGTGCGGCG--GGC GCT GCCGGTGCCGCGCCAGCGGCCGGACG TGCCTTGACCACGCG XOO3694 3956949 - 3956440 - | hypothetical protein TERM 3022 3957117 - 3957091 - R 83 -16.7 -2.87344 | opp_overlap 3957096, overlap 3957096 CAGGGCCTGCATAGA CAAAACCCGGC GCAAG GCCGGGTTTTG TCTGCAACAACGCTA TERM 3023 3957096 - 3957112 + r 95 -10.8 -4.52589 | opp_overlap 3957091 3957096 CCTGCATAGACAAAA CCCGGC GCAAG GCCGGG TTTTGTCTGCAACAA TERM 3024 3957112 - 3957096 - R 95 -10.8 -4.60797 | opp_overlap 3957096, overlap 3957091 CCTGCATAGACAAAA CCCGGC GCAAG GCCGGG TTTTGTCTGCAACAA mopB 3958239 - 3957682 - | outer membrane protein XOO3697 3958655 - 3959677 + | oxidoreductase TERM 3025 3959662 - 3959694 + F 79 -13.4 -3.53563 | opp_overlap 3959660 3959682 GATCGGTAAGTTAGT CCTGGCCGGTTGGT AATGC ACCGGCCGGGCAGG TTTGGCCGGCGCTCT TERM 3026 3959708 - 3959748 + F 100 -20.4 -3.85698 | GGTTTGGCCGGCGCT CTGCGCCTCGGTGCGCAG AGCGC CGGCGCATCGGGGCGCGG TTTGTGCAGGCGGCA TERM 3027 3960904 - 3960880 - g 74 -10.6 -3.7282 | GCAGTGGACCAACAA GGCGCGCGCC GGGCA GTCGCACGCC ATCAATACGTGCATC fadH 3959885 - 3961924 + | 2,4-dienoyl-CoA reductase TERM 3028 3962814 - 3962773 - g 75 -15.1 -2.70932 | gap 1, opp_overlap 3962761 3962811, overlap 3962775 CTGCGCTGGCAACGA CAGCGTCTGCTGCCGCCATC GGT GATTGCGGC-GCTGTCGCTG GCCCTGCCGACCTTT TERM 3029 3963375 - 3963359 - g 82 -5.8 -4.8048 | gap 1 CGCTCAGACGAAAAA CGCCCGC TGCA GCGG-CG ACGTCCCCCCAAGTT XOO3699 3962023 - 3963393 + | hypothetical protein XOO3701 3964000 - 3964485 + | IS1404 transposase TERM 3030 3964491 - 3964474 - f 72 -4 -4.61482 | overlap 3964475 3964486 CGCCCCAAAAAACAA TCGGCG GAATGA CGCCGG CGGCCTATGCCCAGC XOO3707 3966483 - 3966902 + | putative transposase XOO3708 3966868 - 3967344 + | putative transposase torS 3967341 - 3968171 + | two-component system sensor protein XOO3710 3968159 - 3968632 + | two-component system regulatory protein TERM 3031 3968660 - 3968711 + T 91 -18 -3.14211 | ATTGCCTCGTGGGAT TGCACCTGGGCGCGATGAGTGTTC CCGG GAATGGCCGTCGCGCCCGGGTGCG TTCCTACCCAGGCAT XOO3711 3969001 - 3968747 - | hypothetical protein gst 3969626 - 3968985 - | glutathione S-transferase TERM 3032 3970526 - 3970510 - g 70 -2.2 -4.63932 | overlap 3970511 CAGCGTCGAAGAAAA CCTGGA CCTGT TCCAGC GCATGCGTGCCGGCG glnS 3970031 - 3971770 + | glutaminyl-tRNA synthetase TERM 3033 3971813 - 3971787 - T 70 -12.2 -3.24232 | overlap 3971785 3971783 3971788 TGCGGCGGAAATACA GCGACGTCCGCT CGA AGCGGGCGTCGA AGCCACAGAAGGCAG TERM 3034 3971812 - 3971788 - T 77 -15.7 -2.54325 | overlap 3971787 3971785 3971783 GCGGCGGAAATACAG CGACGTCCGCT CGA AGCGGGCGTCG AAGCCACAGAAGGCA TERM 3035 3971849 - 3971824 - T 85 -14.7 -3.551 | opp_overlap 3971846 3971847, overlap 3971825 GTCGAAGCCACAGAA GGCAGGCGGTG ATCG CACCGCCTGCG GATGCAACATCTGCG TERM 3036 3971848 - 3971825 - T 86 -18.2 -2.72739 | opp_overlap 3971846 3971847, overlap 3971824 TCGAAGCCACAGAAG GCAGGCGGTG ATCG CACCGCCTGC GGATGCAACATCTGC reut4275 3972740 - 3972198 - | IS30 family transposase XOO3716 3973650 - 3973204 - | transposase XOO3717 3974673 - 3974197 - | putative transposase XOO3718 3974995 - 3974639 - | putative transposase XOO4903 3975364 - 3975155 - | hypothetical protein XOO3719 3975499 - 3976200 + | integral membrane protein TERM 3037 3976333 - 3976364 + F 80 -5.6 -4.69053 | GCCGATTCCGAGCAC CGGCCGCGCCCGCC CGGC GGTGAGCACAGTCG TTTTGTTAGCTGCTC XOO3720 3976964 - 3977524 + | hypothetical protein XOO3721 3977561 - 3978604 + | putative RNA 2'-O-ribose methyltransferase gfo 3980071 - 3978926 - | glucose-fructose oxidoreductase TERM 3038 3979408 - 3979429 + g 89 -5.1 -5.15634 | gap 1, opp_overlap 3979412 CGCCGAACTGCGAAC GCA-ACCGCC ACG GACGGTCTGC TTTTTTCGTACCGTG XOO3723 3980259 - 3981008 + | gluconolactonase precursor TERM 3039 3981276 - 3981290 + G 74 -11.4 -3.6682 | GAATTCCTGCGCCTG CCCCTG TTG CAGGGG TTTCAGTCGCTGACC TERM 3040 3981586 - 3981555 - g 76 -13.8 -3.08187 | gap 1, overlap 3981525 3981545 AAACACGTCAGCGAA CGCAGCCGCAAGGAA GGC TTCCTGGCGG-TGCG CATCGAACATCCCGA XOO3725 3981219 - 3981941 + | hypothetical protein XOO3726 3982111 - 3982548 + | hypothetical protein TERM 3041 3982945 - 3982887 - g 77 -8.9 -4.25104 | gap 3, opp_overlap 3982923 3982923, overlap 3982888 3982922 CGGCCGGCATGAAAA TCGCCAATGCGCTGGCCGAGCAAGGCCT GATCGA ACGCCTCGC-CGGCC-GCG-ACCGGCGC AGCAAGGGCTTGTAC XOO3727 3982676 - 3983149 + | MarR family transcriptional regulator fadB 3983195 - 3984022 + | p-hydroxycinnamoyl CoA hydratase/lyase TERM 3042 3984065 - 3984083 + F 79 -8.8 -4.36914 | overlap 3984066 CGCGTTACGCGCGCA TCGCTGGC GCT GCCAGTGG TTTTCTGCACCGAGG TERM 3043 3985202 - 3985227 + G 93 -13.9 -4.06419 | TGGTCATGGGCGGTG GCCGCCCGGCG CACT TGCCGCGCGGC TTCTTTGTCGAACCG badH 3984106 - 3985575 + | aldehyde dehydrogenase XOO3730 3985601 - 3987256 + | acyl-CoA synthetase TERM 3044 3987364 - 3987383 + T 76 -10 -3.87815 | opp_overlap 3987356 CATCGAACCGCTACG CGTTCGAC ACCT GTCGAGCG TTTGTGCGCGTCGGC pcaQ 3988481 - 3987441 - | transcriptional regulator TERM 3045 3988556 - 3988612 + r 74 -5.3 -4.65895 | gap 3, opp_overlap 3988556, overlap 3988594 GAAGTCTTCGAACGA TTCGCCGCGCATGATGGCGTA-GACC TGCAGATT GGTCATGCGC-ACCACGCGCG-CGAA TTTTTCGATGACGAA pcaH 3989775 - 3988879 - | protocatechuate 4,5-dioxygenase subunit beta TERM 3046 3989362 - 3989412 + g 70 -7.5 -3.96148 | gap 2, opp_overlap 3989379 GCCCGGCCAGTCCGG CACATGCGGCCACAGCAGCGGCAGC GGC GCTGC-GCAGCCATGGTCG-ATGGG TTTGTCCTGGAACAC vanR 3990118 - 3990327 + | GntR family transcriptional regulator XOO3736 3990896 - 3990435 - | putative transposase XOO3737 3991875 - 3990859 - | transposase TERM 3047 3990990 - 3990974 - GR 74 -10.1 -3.70902 | opp_overlap 3990969, overlap 3990975 CGGGTCAGATCGAAA CGGCGGT TGA ACCGCCA CATCGTCTCTGCCAG TERM 3048 3991723 - 3991708 - GR 74 -4.6 -4.55697 | ACGCGGACAAACAAA GCCCTG TGGC CAGCGC GAGATCTCCAACGCC XOO3738 3992433 - 3991903 - | putative transposase XOO3739 3993273 - 3992461 - | hydrolase visC 3994597 - 3993401 - | 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase TERM 3049 3993951 - 3993941 - G 70 -2.4 -4.66833 | GGCGAATGGCAAAAA TGCC AGC GGCC CAGTGGTCAGGAAGC TERM 3050 3994043 - 3994011 - G 84 -12.8 -3.72576 | TCGGTTTCCACGAAA GCGACCACGCC-ACGC TGT GCGTAGGCGTG-CCGC GAAACCGGCAGCCCG TERM 3051 3994453 - 3994429 - G 75 -14.3 -2.94912 | CGGCGAAGGCATAGA CGCGCAGATCA GGT TGATCAGCGCG CCAGCGTGCGGGCGC ubiH 3995793 - 3994579 - | 2-octaprenyl-6-methoxyphenyl hydroxylase TERM 3052 3995678 - 3995658 - G 81 -15.4 -3.01712 | TGCGTTGGTCGAACA CCGCCGGC GGCGA GCCGGCGG GGGTGGCCTCCACCA XOO3742 3996086 - 3996664 + | hypothetical protein XOO3743 3996668 - 3997225 + | hypothetical protein XOO3744 3997230 - 3998171 + | acetoin utilization family protein ostA 3998242 - 4000740 + | organic solvent tolerance protein TERM 3053 4002080 - 4002056 - g 71 -9.1 -3.78934 | overlap 4002057 CCGCGCCGATAACAA CGCCACGGCCG CTC CGGCCAAGTCG GCAGATCCTGCTTTG surA 4000737 - 4002128 + | peptidyl-prolyl cis-trans isomerase TERM 3054 4002833 - 4002880 + G 71 -4.5 -4.56597 | overlap 4002874 GTCATTGAGCAGCTG CGTGGCGACGGCATGCACCTG ATCGGC CCGCTGCCGGCCGACACCGCG TTTTTGCCGCAAAAG pdxA 4002149 - 4003120 + | 4-hydroxythreonine-4-phosphate dehydrogenase ksgA 4003377 - 4004165 + | dimethyladenosine transferase TERM 3055 4004158 - 4004182 + F 77 -4.1 -4.91429 | TGGCCAATGTCGAGC CGGCTTGAGCG CCG CTCCCAAACCG TTTTATTTAGACTTT apaG 4004202 - 4004585 + | ApaG apaH 4004614 - 4005570 + | diadenosine tetraphosphatase folA 4006118 - 4005624 - | dihydrofolate reductase type III TERM 3056 4006220 - 4006207 - R 78 -3.1 -5.02502 | gap 1, overlap 4006208 CATAGCACACAAAAA TGCCGC CAA GCG-CA GCCGACGACTGTTCA thyA 4007263 - 4006469 - | thymidylate synthase lgt 4008150 - 4007260 - | prolipoprotein diacylglyceryl transferase XOO3754 4008696 - 4008205 - | hypothetical protein XOO3755 4009592 - 4008696 - | glycine rich protein TERM 3057 4009604 - 4009631 + r 83 -7 -4.90136 | gap 1, overlap 4009605 4009607 CCAACTCCTGCCTGA TGC-GCGCTGATC GTC GATCAGCGCTGGG TTTTTGCTATTCCTT TERM 3058 4009607 - 4009627 + r 79 -15.5 -2.88275 | overlap 4009605 4009604 ACTCCTGCCTGATGC GCGCTGATC GTC GATCAGCGC TGGGTTTTTGCTATT XOO3756 4010694 - 4009924 - | hypothetical protein TERM 3059 4009999 - 4010023 + gr 71 -4.9 -4.4009 | opp_overlap 4009992, overlap 4010007 ACCGAAATCCACCTG CGGGGCGCG CGCGATC TGCGCTTCG TTTTCTACGCTGAAA dgkA 4011026 - 4010658 - | diacylglycerol kinase XOO3758 4011221 - 4011724 + | hypothetical protein XOO3759 4011776 - 4011922 + | hypothetical protein TERM 3060 4011960 - 4011934 - f 70 -12.3 -3.20991 | opp_overlap 4011953 4011959 CTGAATGCAATGGAA TCGATCCGGCA TCCCT TGCCGGATCGG CTGCGCTGCAGGCGA TERM 3061 4011959 - 4012007 + F 100 -18.2 -3.57144 | gap 1, opp_overlap 4011934, overlap 4011953 4011960 4012003 ATCCCTTGCCGGATC GGCTGCGCTGCAGGCGATGCGTT GGCT GACGCTTCGTCTGCAGCGC-GCA TTTGCGCGTGACGGC TERM 3062 4011960 - 4012006 + F 100 -21.7 -2.74144 | gap 1, overlap 4011953 4011959 4012003 TCCCTTGCCGGATCG GCTGCGCTGCAGGCGATGCGTT GGCT GACGCTTCGTCTGCAGCGC-GC ATTTGCGCGTGACGG XOO3760 4012231 - 4012602 + | putative transposase XOO3761 4012568 - 4013044 + | putative transposase TERM 3063 4013332 - 4013308 - T 84 -15.7 -3.28712 | overlap 4013311 TTGCGTCGCCGACAA CAAGGCGCAGG CAG CCCGCGCCCTG CTACCGACCGCTACC TERM 3064 4013329 - 4013311 - T 84 -13.8 -3.78934 | overlap 4013308 CGTCGCCGACAACAA GGCGCAGG CAG CCCGCGCC CTGCTACCGACCGCT colS 4014679 - 4013348 - | two-component system sensor protein colR 4015389 - 4014766 - | two-component system regulatory protein tesA 4016240 - 4015572 - | acyl-CoA thioesterase I ftsE 4016350 - 4016949 + | ABC transporter ATP-binding protein TERM 3065 4018050 - 4018093 + G 88 -11 -4.26903 | gap 1, overlap 4018077 GGGCTGCCGCCGCTG CTGCGGCTGCGCAACGTGC CGCCGAT GCGCGT-GCTCAACCGCAG TTTTGCTGCGGTACC XOO3766 4016946 - 4019429 + | oxidoreductase TERM 3066 4019506 - 4019546 + F 80 -14.8 -3.14132 | gap 1, overlap 4019511 CCGCCCTAAGCGCGC GAGACCGCAGCGCATGCTG GCGA CGGCATGCGCTGT-GTCGC TTAATGGCCGAACGA TERM 3067 4019511 - 4019542 + F 87 -18.8 -2.56596 | overlap 4019506 CTAAGCGCGCGAGAC CGCAGCGCATGCTG GCGA CGGCATGCGCTGTG TCGCTTAATGGCCGA TERM 3068 4020514 - 4020473 - g 75 -10.1 -3.92324 | gap 1, opp_overlap 4020507 4020510, overlap 4020468 4020509 TGCCCGAAGACGAAA GCCGCGCGCTGC-TGCAAAC ATT GTTCGCGCACAGCACGCGCC CTGCGCTGGTGTATC tauD 4019581 - 4020660 + | taurine dioxygenase XOO3774 4023551 - 4023904 + | hypothetical protein TERM 3069 4024262 - 4024213 - T 74 -9.1 -3.85817 | gap 1, opp_overlap 4024218 4024246, overlap 4024214 AGCCGCTCTTAGAAA TGGGTGCGCGCGATGCGGCG-TGA TTG CCAACGCTGCATCGCGCGCTTCTG CAGAGCAATGCATCT TERM 3070 4024261 - 4024214 - T 70 -12.6 -2.91276 | gap 1, opp_overlap 4024218 4024246, overlap 4024213 GCCGCTCTTAGAAAT GGGTGCGCGCGATGCGGCG-TGA TTG CCAACGCTGCATCGCGCGCTTCT GCAGAGCAATGCATC TERM 3071 4024218 - 4024257 + T 100 -23 -3.28924 | opp_overlap 4024214 4024213, overlap 4024246 CTCTTAGAAATGGGT GCGCGCGATGCGGCGT GATTGCCA ACGCTGCATCGCGCGC TTCTGCAGAGCAATG XOO3775 4024853 - 4024206 - | hypothetical protein XOO3776 4025490 - 4024888 - | hypothetical protein TERM 3072 4025295 - 4025326 + g 100 -2.9 -5.86061 | overlap 4025294 TTTTGGTGTTCCATC CGCCCCGCGATTT CCCGAT GGATTGTGGGCCG TTTTTTTTAATGCGC TERM 3073 4026328 - 4026359 + r 100 -2.9 -5.86061 | overlap 4026327 TTTTGGTGTTCCATC CGCCCCGCGATTT CCCGAT GGATTGTGGGCCG TTTTTTTTAATGCGC phuR 4026914 - 4026717 - | outer membrane hemin receptor XOO3781 4027584 - 4027339 - | hypothetical protein XOO3782 4029047 - 4027959 - | voltage-gated potassium channel beta subunit TERM 3074 4028171 - 4028154 - G 71 -12.7 -2.94099 | opp_overlap 4028160, overlap 4028156 GGCGGCCAGCACACA GAGCGCG CGCG CGCGCTC AAGCCGGCGCGCTTC TERM 3075 4031122 - 4031155 + H 76 -7.6 -4.3255 | gap 1, overlap 4031109 4031123 TGCGACCACAGTGGG TTCGTTGATCGGCCA AAAAG TGGT-GATCAACGAG TTTGTTGCTTACAGC rbsK 4031394 - 4032464 + | ribokinase TERM 3076 4034125 - 4034098 - g 80 -15 -3.16881 | gap 1 GATCGACCGGACCAA GCTGGTGGTGGTC GAC GAC-ACCACCAGC GGCAACGATCAGAGC XOO3786 4033055 - 4035238 + | hypothetical protein TERM 3077 4035283 - 4035248 - f 87 -19.1 -2.67209 | overlap 4035239 4035250 CAGTAAGCGATACCA CAGC-GGCGGTGCCGGC CAAT GCCGGC-CCGCCTGCTG CCGGCCCGACCGCCG TERM 3078 4035281 - 4035250 - f 79 -15.9 -2.87522 | overlap 4035248 4035239 GTAAGCGATACCACA GC-GGCGGTGCCGGC CAAT GCCGGC-CCGCCTGC TGCCGGCCCGACCGC TERM 3079 4035994 - 4035971 - g 72 -8.8 -4.08216 | gap 1, overlap 4035972 CGACTCGCCGCAAAA GGC-CGCGCAG GTG CTGCGCGAGAC CGGCGCCGACGCGGT XOO3787 4035348 - 4036346 + | hypothetical protein TERM 3080 4036529 - 4036558 + G 71 -7.9 -4.11484 | gap 1 AGTGGGCAGTGGCGT CGGTGC-GCAGA CGGAGAT TCTGCTGCGCCG TTTTCCCGGGTTGCA XOO3788 4036374 - 4037093 + | methyltransferase TERM 3081 4039638 - 4039604 - g 74 -10.6 -3.79747 | CGATGTATCAGCAAA CCGCGTCTTACGGCCA CTT CGGCCGCAAGCCGAAG GACTTCACCTACACC metK 4038535 - 4039746 + | S-adenosylmethionine synthetase TERM 3082 4039775 - 4039747 - T 82 -11 -3.96618 | gap 1 GCCAAGCTGAAATAA TCGGCC-CGCTCC TGCG GGAGCGAGGCAGA TGCGTCATGACTGGG TERM 3083 4039781 - 4039812 + T 100 -14.4 -4.88067 | overlap 4039786 GCGAGGCAGATGCGT CATGACTGGGCCGC CGAT GCGGCCCAGTTGCG TTTTTGTGGGTCGGT TERM 3084 4039786 - 4039807 + T 93 -17.3 -3.49077 | overlap 4039781 GCAGATGCGTCATGA CTGGGCCGC CGAT GCGGCCCAG TTGCGTTTTTGTGGG TERM 3085 4039989 - 4039965 - T 100 -13.5 -4.49958 | overlap 4039966 AGCGCAGTAAACAAA GCCCCTCCCCC CAC GGGAGAGGGGT TGGGGTGAGGGGACG TERM 3086 4039988 - 4039966 - T 91 -17 -3.29252 | overlap 4039965 GCGCAGTAAACAAAG CCCCTCCCCC CAC GGGAGAGGGG TTGGGGTGAGGGGAC appA 4041689 - 4040091 - | phosphoanhydride phosphohydrolase TERM 3087 4041498 - 4041465 - G 100 -21.1 -3.05384 | GCGTGCTGCATGTAA GGTGCGTGCCGCGAT CGCC ATCGCGGCACGCACG CCGACGACGCTGCGC cirA 4044435 - 4041679 - | TonB-dependent receptor TERM 3088 4044617 - 4044601 - H 86 -7.3 -4.70879 | overlap 4044614 TGCAAACCCGAAAAA TGCATGC AAC ACATGCA CAATTCTGCACATTC XOO3794 4045514 - 4046896 + | putative ISXo8 transposase TERM 3089 4047009 - 4046997 - T 75 -3.3 -4.88407 | overlap 4046998 AAGAAAGTAATAAAA CTTCC GCA GGCAG AACTCGGCACTGATC XOO3795 4048109 - 4047411 - | TetR/AcrR family transcriptional regulator TERM 3090 4047451 - 4047482 + g 75 -12.3 -3.53444 | gap 1, overlap 4047453 TGCATCAACAGATCG GCCGAGCG-ATGCG CAAGC CGCTTGCGCTCGGC TTCGTTGTTGCCGCG ppc 4050820 - 4048106 - | phosphoenolpyruvate carboxylase TERM 3091 4050991 - 4051049 + r 74 -14 -2.89564 | gap 3, opp_overlap 4050981 4051026, overlap 4050991 CGCAATGCGCCAGGA G---CGCACCCGGGCGCGATGGAGCTTCA CCGA TAAAGCCCGATCGCGCCCGGGTGCGCTCC TATGTGCGATGCGAC TERM 3092 4050991 - 4051046 + r 100 -32 -2.69799 | opp_overlap 4050981 4051026, overlap 4050991 CGCAATGCGCCAGGA GCGCACCCGGGCGCGATGGAGCTTCA CCGA TAAAGCCCGATCGCGCCCGGGTGCGC TCCTATGTGCGATGC XOO3797 4051685 - 4051014 - | hypothetical protein sahH 4051873 - 4053315 + | S-adenosyl-L-homocysteine hydrolase TERM 3093 4053349 - 4053374 + T 91 -20.5 -2.52896 | opp_overlap 4053352, overlap 4053352 4053352 4053353 CTCGACAGTGTGAAT CAACGGGCGCC CCAA GGCGCCCGTTG TGCATTAAGGCGTCC TERM 3094 4053371 - 4053352 - T 88 -16.4 -3.35371 | opp_overlap 4053349 4053352 4053352 4053353 GACAGTGTGAATCAA CGGGCGCC CCAA GGCGCCCG TTGTGCATTAAGGCG TERM 3095 4053352 - 4053371 + T 89 -16.4 -3.41878 | opp_overlap 4053352, overlap 4053349 4053352 4053353 GACAGTGTGAATCAA CGGGCGCC CCAA GGCGCCCG TTGTGCATTAAGGCG XOO3799 4054455 - 4053547 - | methyltransferase XOO3800 4055296 - 4054364 - | sulfotransferase TERM 3096 4055274 - 4055258 - GR 70 -2.2 -4.62069 | TGTCGAGTCGAAAAA GCGATT GGAAT ATTCGC GCTGCTTGGAGGGCA XOO3801 4056623 - 4055787 - | hypothetical protein XOO3802 4057202 - 4056624 - | hypothetical protein XOO3803 4057955 - 4057410 - | hypothetical protein TERM 3097 4057893 - 4057904 + g 81 -3.6 -5.00616 | TTCGCGCGCAACCTT GTCC ACCT GGGC TTTTTTCACCAAGCC TERM 3098 4058994 - 4059023 + r 87 -5.5 -5.1615 | overlap 4058996 CGCTGATCAACACAT GCCCCCCGATACG AACG CGCGTGCGGGGGC TTTTTTCCCTATTGG dgd 4060226 - 4059291 - | D-galactose 1-dehydrogenase XOO3805 4060517 - 4060741 + | hypothetical protein xcp 4061725 - 4061087 - | protease XOO3807 4062891 - 4061914 - | quinone reductase XOO3808 4063382 - 4064218 + | hypothetical protein XOO3809 4064288 - 4064764 + | hypothetical protein metF 4064804 - 4065631 + | 5,10-methylenetetrahydrofolate reductase XOO3811 4065632 - 4065841 + | hypothetical protein XOO3812 4066002 - 4066589 + | hypothetical protein XOO3815 4067904 - 4067803 - | hypothetical protein XOO3816 4068839 - 4067892 - | hypothetical protein XOO3817 4069585 - 4068980 - | hypothetical protein TERM 3099 4069200 - 4069188 - G 75 -4.1 -4.65895 | TCGCGCACGTAAAAA TCCTG CAG CAAGA ACGCGCACTGCGCGC TERM 3100 4069214 - 4069202 - G 74 -10.5 -3.72027 | ATCCTGCAGCAAGAA CGCGC ACT GCGCG CCATGCCGGAAACAG TERM 3101 4069722 - 4069675 - R 76 -13.4 -3.18429 | gap 1, overlap 4069706 CAAAAGCCCCACCAA CTCTCCGTCAGCACAGCCCCCTT GGT AAGGAGGC-GCGCCAACGGCGCG GGGATCGGAAGAGTA TERM 3102 4069781 - 4069735 - R 88 -17.2 -3.05844 | overlap 4069738 GCGGGGATCGGAAGA GTACCGTGCACCCAACGTCCGC AAC GCGGACGCTGGGTGAGCAGCCC GCAAAGCGGGCTGCT TERM 3103 4069778 - 4069738 - R 90 -19.7 -2.75074 | overlap 4069735 GGGATCGGAAGAGTA CCGTGCACCCAACGTCCGC AAC GCGGACGCTGGGTGAGCAG CCCGCAAAGCGGGCT TERM 3104 4069785 - 4069843 + r 77 -13.3 -3.63515 | opp_overlap 4069787 4069788, overlap 4069791 4069795 GGTGAGCAGCCCGCA AAGCGGGCTGCT-CCACGGTCAACTCAGC TCA GCTGAGTTGACCGTGGCAGT-GCTTGTAC TTCTTGCCGCTGCCG TERM 3105 4069841 - 4069787 - R 75 -12 -3.56092 | opp_overlap 4069785 4069791 4069795, overlap 4069788 TGAGCAGCCCGCAAA GCGGGCTGCTCCACGGTCAACTCAGC TCA GCTGAGTTGACCGTGGCAGTGCTTGT ACTTCTTGCCGCTGC TERM 3106 4069840 - 4069788 - R 78 -15.5 -2.73441 | opp_overlap 4069785 4069791 4069795, overlap 4069787 GAGCAGCCCGCAAAG CGGGCTGCTCCACGGTCAACTCAGC TCA GCTGAGTTGACCGTGGCAGTGCTTG TACTTCTTGCCGCTG TERM 3107 4069791 - 4069837 + r 100 -21.9 -3.61089 | opp_overlap 4069788 4069787, overlap 4069785 4069795 CAGCCCGCAAAGCGG GCTGCT-CCACGGTCAACTCAGC TCA GCTGAGTTGACCGTGGCAGT-GC TTGTACTTCTTGCCG TERM 3108 4069795 - 4069834 + r 100 -24.6 -2.91976 | gap 1, opp_overlap 4069788 4069787, overlap 4069791 4069785 CCGCAAAGCGGGCTG CT-CCACGGTCAACTCAGC TCA GCTGAGTTGACCGTGGCAG TGCTTGTACTTCTTG secA 4072551 - 4069813 - | preprotein translocase subunit SecA TERM 3109 4072641 - 4072623 - RH 100 -16 -4.05788 | CCGCCGTAAACGAAA CAGGGCGC ACT GCGCCCTG TCGATGGCAACACCC XOO3819 4073685 - 4072708 - | peptidase TERM 3110 4073623 - 4073634 + gH 81 -3 -5.00884 | CCGGGTCTGCCGGGA TTTG ATGA CAAA TTTTTTCAACGCCAT XOO3820 4073650 - 4074096 + | hypothetical protein lpxC 4075194 - 4074283 - | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase TERM 3111 4075347 - 4075320 - R 100 -15.6 -4.3739 | overlap 4075321 CACGCTGTTACAAAA GCTGCCGGATCG GCAC CGATCCGGCAGA AATGACATGGCATGG TERM 3112 4075346 - 4075321 - R 93 -19.1 -3.22113 | overlap 4075320 ACGCTGTTACAAAAG CTGCCGGATCG GCAC CGATCCGGCAG AAATGACATGGCATG ftsZ 4076675 - 4075431 - | cell division protein FtsZ ftsA 4078213 - 4076978 - | cell division protein ddl 4080112 - 4079156 - | D-alanine--D-alanine ligase murC 4081611 - 4080109 - | UDP-N-acetylmuramate--L-alanine ligase TERM 3113 4081508 - 4081487 - GR 74 -10.1 -3.73775 | overlap 4081488 4081491 CCGATGCCGACGAAA TGCACGCGC GGAA ACGCGCGCA CCAGATCGCCACTGT murG 4082864 - 4081539 - | N-acetylglucosaminyl transferase TERM 3114 4082394 - 4082373 - GR 77 -11.5 -3.72576 | overlap 4082385 TTCTTCGCCAGCAAA GCTGCCCGG AAAG CCGGTCAGC ACGCGGCGCGCGAAA TERM 3115 4082607 - 4082562 - GR 81 -11.2 -3.96148 | gap 3, overlap 4082528 4082563 CTTGCGCAGCACAAA GCCTGCGGCGCG-CACTGCGCGC ATT ACCCGCAGCGGCGCGCCG-AG-C AACTTCACCATGCCT ftsW 4084321 - 4082861 - | cell division protein mraY 4085319 - 4084234 - | phospho-N-acetylmuramoyl-pentapeptide-transferase TERM 3116 4084310 - 4084295 - G 72 -8.2 -3.96224 | GAAATGATCCAGAAA CGCACG ATCA CGCGCG GCTCCGGCCAACCCT murF 4086820 - 4085309 - | UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanyl ligase murE 4088304 - 4086817 - | UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase TERM 3117 4087432 - 4087474 + g 73 -12.1 -3.41051 | gap 1, opp_overlap 4087420 4087431, overlap 4087440 CAACGGCGAATGCAC CGG-ATGCACTTCGCCCTGG ATAT TCAGGGCGAAGTTGATGCCG TTGTGGTCCAGCTGC TERM 3118 4087440 - 4087465 + g 86 -15.5 -3.19653 | opp_overlap 4087431, overlap 4087432 AATGCACCGGATGCA CTTCGCCCTGG ATAT TCAGGGCGAAG TTGATGCCGTTGTGG ftsI 4090178 - 4088301 - | penicillin-binding protein 3 TERM 3119 4089216 - 4089270 + g 71 -12.6 -3.21099 | GGGGTTGGTATCGAT GACGGTGTCCTTGGTCACCACGCCGG CAG TCAGCGCGGTGGCCACGGTCAGCGGC TTCATCGTCGAACCC TERM 3120 4090218 - 4090231 + r 74 -5.2 -4.5442 | opp_overlap 4090218, overlap 4090207 4090213 CTTCGCTGTGCAAAA CGGC TGTCCT GCCG TTTTGTCGTTGGCGC ftsL 4090572 - 4090309 - | cell division protein mraW 4091630 - 4090569 - | S-adenosyl-methyltransferase MraW XOO3834 4092082 - 4091627 - | cell division protein MraZ TERM 3121 4092507 - 4092478 - g 71 -12.1 -3.19157 | gap 1 GATGAATTCCACGAA CGCCCCACCGCGGC GCT GGCGCAGTGGG-CG GCACCGGCAGAGAAC XOO3835 4092397 - 4093164 + | hypothetical protein TERM 3122 4093401 - 4093357 - f 85 -15.8 -3.40371 | gap 1 TACGTCACCAAGGAA CGCGACA-GCCACAGCGCAAG AGCG CTTGCGCTGCAACGCGCCGCG AGCGAATGGAAGGCC XOO3836 4093382 - 4093780 + | hypothetical protein TERM 3123 4093926 - 4093972 + T 71 -6.2 -4.36914 | opp_overlap 4093892 4093895, overlap 4093961 CTTGAGTCAAGGGGG CGCGGCGACAGCCGCGGGGATG TGG CATGCCCGGAGCGGGACCCGCG TTTTGTACCGCCAAC XOO3837 4095526 - 4094705 - | hypothetical protein TERM 3124 4097223 - 4097201 - gH 85 -7.7 -4.59773 | gap 1, overlap 4097202 4097203 GCGTACCTGGAAAAA CTCGCCACCG GCAG CGATGGCG-G CCTGCACGGCGCCAC XOO3838 4095608 - 4097338 + | hypothetical protein XOO3839 4097304 - 4097711 + | hypothetical protein TERM 3125 4097913 - 4097926 + GF 73 -8.1 -4.09963 | ATGCGTTCGGCCACC GTGGC GCCA GCCAC TTGTTGTTGTTCGCC XOO3840 4097705 - 4098280 + | hypothetical protein TERM 3126 4098485 - 4098528 + GT 82 -11 -4.07885 | gap 1, overlap 4098489 ATGGCGTGCCGATCG TGGCGC-GCGGCGCCGG CACCGGCACCA CCGGCGCGGCAGTGCCA TTTTCCGGCGGCGTG dld 4098235 - 4099662 + | D-lactate dehydrogenase kdpE 4100458 - 4099676 - | two-component system regulatory protein TERM 3127 4100081 - 4100105 + gT 73 -5.7 -4.35524 | gap 2, opp_overlap 4100076, overlap 4100081 GGTGACGTAATCGTT GG-CGCCG-GC ATCGA GCGCGGCGACC TTTTCGGTTTCGCCG kdpD 4103042 - 4100382 - | two-component system sensor protein TERM 3128 4100686 - 4100706 + gr 73 -8.9 -4.08692 | overlap 4100687 GTGACCGCGATGCCG GGCGGCGAG AAC TTCGCCGCA TTTTCCAGCACGTTG TERM 3129 4101080 - 4101097 + gr 78 -12.7 -3.55444 | opp_overlap 4101079 4101078 4101075 CCGACGACAACAATG CCGAGCG CAGG CGCTCGG TTTCGCCACTCACAC TERM 3130 4101150 - 4101194 + gr 100 -17.9 -3.61398 | overlap 4101130 4101128 CAGGCGGGTGCGTAG CGCCGCCTGGCCGATGT CTTCCACCATC GCTTCGGCCAGGCGGCG TTGTTCCAGACCGGG TERM 3131 4102438 - 4102422 - GR 75 -3.5 -4.84359 | overlap 4102423 GGATGGCGAGAAAAA CGCCTGC AAC GCCTGCG TGGCCTGCTCGGGCA TERM 3132 4102853 - 4102836 - GR 73 -12.7 -3.16055 | CAAACCCTCCAGCAA CGCAGCG GTTT CGCTGCG CCCGTGCGTCTCCAC kdpC 4103711 - 4103094 - | potassium-transporting ATPase subunit C TERM 3133 4103351 - 4103384 + g 74 -10.9 -3.57561 | gap 1 ATTGCGTCAGCAGCT CGC-CCGGCACCGCCT CCG GGGCGATGCCGTCGCG TTTGGCCACTTGCGC kdpB 4105812 - 4103764 - | potassium-transporting ATPase subunit B TERM 3134 4104527 - 4104546 + g 71 -10.7 -3.67597 | opp_overlap 4104523 4104524 GCCACCACCAACGGT GTGGCGC CGCCAC GCGCCAC TTCTTCGATACGGCC kdpA 4107618 - 4105825 - | potassium-transporting ATPase subunit A TERM 3135 4107840 - 4107815 - R 95 -15.5 -4.06384 | gap 1 CGCCAACATGACAAA GCGCTGC-CGCA CCA TGCGCGCAGCGC CGATCGAGCAGACAA TERM 3136 4107997 - 4107977 - R 79 -8.2 -4.39002 | overlap 4107966 4107978 AAAGTCCGCATAAAA TGCGCAGG CCAGC CCTGCGCC ACAATCAGATGGCCC TERM 3137 4107996 - 4107978 - R 70 -11.7 -3.22678 | overlap 4107966 4107977 AAGTCCGCATAAAAT GCGCAGG CCAGC CCTGCGC CACAATCAGATGGCC XOO3847 4108748 - 4108176 - | hypothetical protein TERM 3138 4109193 - 4109205 + r 73 -3.3 -4.67904 | GTCACTTCGTCCAGG GCAAG ACG CATGC TTTTTGCACTTCCTG TERM 3139 4109395 - 4109372 - R 95 -16.8 -3.87815 | GCGCACTGCCAGAAA TCGCGTTCGC CCGC GCGAACGCGA CGTGACCGGTGCAGA XOO3849 4110523 - 4109867 - | hypothetical protein thiL 4111919 - 4110822 - | thiamine monophosphate kinase TERM 3140 4111262 - 4111227 - G 74 -13.2 -3.18264 | CTGCGGACGCAGCAA GCGGCTGCGCCACTGC TCGT GCAACGGGTCAGCCGC CGCGCAGGTCACATC nusB 4112487 - 4112017 - | transcription antitermination protein NusB ribH 4112960 - 4112484 - | riboflavin synthase subunit beta ribA 4114401 - 4113262 - | GTP cyclohydrolase II; 3,4-dihydroxy-2-butanone 4-phosphate synthase ribE 4115000 - 4114398 - | riboflavin synthase subunit alpha XOO3855 4115561 - 4116184 + | hypothetical protein TERM 3141 4116211 - 4116228 + T 100 -8.3 -5.44721 | opp_overlap 4116212, overlap 4116212 CATGAAATAAGAAAA AGCCCCG CATG CGGGGCC TTTTTTTGCACTCAT TERM 3142 4116227 - 4116212 - T 100 -11.8 -5.39905 | opp_overlap 4116211 4116212 ATGAAATAAGAAAAA GCCCCG CATG CGGGGC CTTTTTTTGCACTCA TERM 3143 4116212 - 4116227 + T 81 -11.8 -3.85748 | opp_overlap 4116212, overlap 4116211 ATGAAATAAGAAAAA GCCCCG CATG CGGGGC CTTTTTTTGCACTCA ribD 4117349 - 4116240 - | riboflavin-specific deaminase; 5-amino-6-uracil reductase XOO3857 4117831 - 4117346 - | acetyltransferase TERM 3144 4117458 - 4117445 - G 78 -8.1 -4.3739 | overlap 4117454 CAGCCGCTGATAAAA CGGCA CCAA TGCCG GCTGGCAATACAGGT XOO3858 4118352 - 4117828 - | transcriptional regulator NrdR XOO3859 4118861 - 4118352 - | hypothetical protein glyA 4120134 - 4118881 - | serine hydroxymethyltransferase TERM 3145 4120309 - 4120280 - R 100 -17.1 -4.05788 | opp_overlap 4120280 4120307 CTGCCTGAAAGCAAA CCCAGGCGCAGGC AAGT GCCCGCGCCTGCG CCGTGGCGCTTTACA XOO3861 4122902 - 4120320 - | TonB-dependent receptor, putative TERM 3146 4121354 - 4121376 + g 78 -3.3 -4.93296 | gap 1, overlap 4121357 AGTAGAAGCGATAGG CGACCTGCGG GCTA CCGTTGG-CG TTTTTGTAGTAATAC TERM 3147 4123297 - 4123264 - RH 71 -10.9 -3.40403 | opp_overlap 4123271, overlap 4123266 4123269 4123286 GCGGGGCTACCACAA TACGACAGGGCGCGC CGAA GCACGCCCTGTTGCC GTCACCGATCCGCTG TERM 3148 4123295 - 4123266 - RH 84 -15.7 -3.27475 | opp_overlap 4123271, overlap 4123264 4123269 4123286 GGGGCTACCACAATA CGACAGGGCGCGC CGAA GCACGCCCTGTTG CCGTCACCGATCCGC TERM 3149 4123292 - 4123269 - RH 81 -16 -2.81872 | opp_overlap 4123271, overlap 4123266 4123264 4123286 GCTACCACAATACGA CAGGGCGCGC CGAA GCACGCCCTG TTGCCGTCACCGATC XOO3862 4123867 - 4123346 - | hypothetical protein TERM 3150 4123962 - 4123951 - gH 82 -5.8 -4.77438 | ATCGATTACGAAAAA GCCT ATTC AGGC CGGACGCAAGATGCC TERM 3151 4125227 - 4125215 - gH 86 -10.5 -4.2558 | CACCGGCCAGGAAAA GCCGG ACT CCGGC GAGATCGTGGTCGGC TERM 3152 4125718 - 4125695 - gH 88 -13.8 -3.85505 | GTACGAAGAAGACAA GCGCCGCCGC ATGG GCGACGACGC CGGCCCGAAGCGCCT yjjK 4123827 - 4125755 + | putative ABC transporter ATP-binding protein TERM 3153 4125791 - 4125776 - fH 100 -11.8 -5.03314 | opp_overlap 4125776 CGTAGCTCCAAAAAA GGCGCC GGAA GGCGCC TTTTTTATATGCGCA TERM 3154 4125776 - 4125791 + FH 100 -11.8 -5.36441 | opp_overlap 4125776 CGTAGCTCCAAAAAA GGCGCC GGAA GGCGCC TTTTTTATATGCGCA XOO3864 4125930 - 4126274 + | hypothetical protein sll7047 4126627 - 4126271 - | hypothetical protein XOO3866 4127948 - 4127118 - | esterase TERM 3155 4127449 - 4127475 + g 72 -2.8 -4.66609 | opp_overlap 4127401 4127400 4127448 4127449, overlap 4127450 ACGATCGGCGAAAAC GCCGACACGCTG CGA TAGCGTCCCGGG TTTTTCAATGCGATG TERM 3156 4127999 - 4127972 - R 100 -20.6 -4.70583 | CTTACGAAGAGAAAA CCCCGCAGCCGG ATCG CCGGCTGCAGGG TTGGACCATCAATGC TERM 3157 4128131 - 4128145 + r 71 -9.2 -3.68351 | CCCCATCCATCTGCT CCGGCG GCG TGCCGG TTTCGATCATGGACG XOO3867 4129807 - 4128650 - | alcohol dehydrogenase C XOO3868 4130099 - 4129824 - | hypothetical protein TERM 3158 4130058 - 4130073 + g 83 -6 -4.91109 | overlap 4130017 GCGCAATCGGCGCAC GCGTGC TAGG GCTCGC TTTTTCTCATGCGGC TERM 3159 4131212 - 4131224 + r 70 -7.7 -4.08767 | GTGGCAACGCGAACG CTGAC GCC GTCAG TTTTCGGCAGCTGCC XOO3869 4132321 - 4131221 - | hypothetical protein TERM 3160 4132272 - 4132290 + g 79 -14.6 -2.96695 | opp_overlap 4132271, overlap 4132269 CACGCACCAGTAGAG CGGCATCG TGT CGATGCCG TAGTTTCCTGCACGA XOO3870 4132334 - 4133179 + | two-component system regulatory protein TERM 3161 4133646 - 4133628 - g 71 -12.4 -3.28712 | GCCCTTTCCGCACAA CTGGCCGC GCG ACGGCCAG CCAGGTGCGCTGTCC TERM 3162 4134505 - 4134495 - g 74 -2.4 -4.75219 | opp_overlap 4134484 CAACCAGCAAGAAAA GCTG TTT CTGC CGTTCTTCCGCGGCG XOO3871 4133176 - 4134675 + | two-component system sensor protein XOO3872 4135652 - 4134708 - | hypothetical protein TERM 3163 4135606 - 4135568 - G 91 -16.7 -3.53012 | overlap 4135569 GTGTTTGCGCGCAAA CCATCGGCGCTGCCAAG GCGAG CAAGGCAGCGCCGATGA AACGAGCCACTGGGT TERM 3164 4135605 - 4135569 - G 87 -18 -2.71712 | overlap 4135568 TGTTTGCGCGCAAAC CATCGGCGCTGCCAAG GCGAG CAAGGCAGCGCCGATG AAACGAGCCACTGGG TERM 3165 4136643 - 4136621 - R 76 -7.6 -4.28432 | overlap 4136622 AACCGGAATCGAAAA GGCTGGCAGC ATT GCTGGCAGCG GTGACCTGGGTGTCG gsh1 4137893 - 4137150 - | glutamate-cysteine ligase precursor XOO3874 4139385 - 4138003 - | putative ISXo8 transposase TERM 3166 4139884 - 4139906 + H 78 -9.8 -4.07885 | TGGCCGACCTGCTGG CCAACGTGCC GCT GGCATGGTGG TTTTCGCGCGCGCTG XOO3875 4139977 - 4140699 + | two-component system sensor protein gsh1 4142250 - 4140886 - | glutamate-cysteine ligase precursor TERM 3167 4141983 - 4142020 + g 75 -7.5 -4.26903 | opp_overlap 4141987, overlap 4141985 4141991 CCGGCTCCAGCGTCA CAGACGCGCCGTCGCGC AGCA GCGCGATGGTGTTGCCG TTTTCCTGCACTGGC TERM 3168 4141991 - 4142012 + g 76 -13.7 -3.15768 | opp_overlap 4141987, overlap 4141985 4141983 AGCGTCACAGACGCG CCGTCGCGC AGCA GCGCGATGG TGTTGCCGTTTTCCT TERM 3169 4142889 - 4142930 + G 100 -14.3 -4.25104 | gap 1, opp_overlap 4142884 ATTACCGAAAGCCTG CGCGCGCGGCCGCTGCAGGC GGC GCTGGCATCGGCAGCG-GCG TTTTGCTGCGGCGCG dr161 4142271 - 4143161 + | nodulin 21-related protein XOO3879 4143646 - 4143299 - | putative transposase XOO3880 4144064 - 4143612 - | putative transposase yihA 4144884 - 4144108 - | GTPase EngB TERM 3170 4144577 - 4144617 + gH 72 -7.5 -4.11484 | gap 1, overlap 4144572 4144578 GTCTTGGACACGCGC GCCAGCGCGTTCTG-GCG GGTCAG CGCATTGAGCGCGCTGGA TTTTCCGGCGTTGGA cycA 4144876 - 4145673 + | cytochrome C4 TERM 3171 4145701 - 4145732 + FH 86 -15.2 -3.59262 | overlap 4145704 4145707 CGTTGCCACACCGCT TCACGACGCCGGTC CCGT GACCGGCGTTGTCA TTTCCCACTCTGCCC TERM 3172 4145704 - 4145729 + FH 87 -16.9 -2.92171 | overlap 4145701 4145707 TGCCACACCGCTTCA CGACGCCGGTC CCGT GACCGGCGTTG TCATTTCCCACTCTG TERM 3173 4145707 - 4145726 + FH 85 -15 -3.60419 | overlap 4145704 4145701 CACACCGCTTCACGA CGCCGGTC CCGT GACCGGCG TTGTCATTTCCCACT dsbA 4146509 - 4147324 + | thiol:disulfide interchange protein XOO3885 4147344 - 4148111 + | hypothetical protein TERM 3174 4148160 - 4148124 - T 72 -4.4 -4.64157 | gap 1, overlap 4148126 4148128 TAAATAACCAGAAAA TTGACGGCCGA-TTCGC ACTG GCGAACTCGACAGCCGA CGCCCCTTCGACACC TERM 3175 4148174 - 4148197 + T 90 -8.1 -4.8622 | GACGCCCCTTCGACA CCGCCTGTG CGCTAA CGCAGGTGG TTTTTCGTTGGGAGC XOO3888 4149401 - 4148856 - | IS1404 transposase TERM 3176 4148906 - 4148929 + g 93 -3.7 -5.40474 | overlap 4148879 4148909 4148910 ACTGCTGGGCATAGG CCACCGGCG TCATTC CGCCGATTG TTTTTTTGGGGCGGT TERM 3177 4148909 - 4148926 + g 78 -4 -4.79949 | overlap 4148879 4148906 4148910 GCTGGGCATAGGCCA CCGGCG TCATTC CGCCGA TTGTTTTTTTGGGGC YXOOp13 4149965 - 4149696 - | IS1404 transposase XOO3892 4153177 - 4151831 - | ISxac1 transposase TERM 3178 4155038 - 4155008 - g 85 -11.8 -4.16016 | opp_overlap 4155036, overlap 4155011 4155027 CGATGGGCGAAGAAA CCAGCGAACAGCTG GAA CAGCTGGTCGCCTG CGTCACCCAGTCCAT TERM 3179 4155035 - 4155011 - g 76 -14.3 -3.10244 | overlap 4155008 4155027 TGGGCGAAGAAACCA GCGAACAGCTG GAA CAGCTGGTCGC CTGCGTCACCCAGTC metC 4153288 - 4155081 + | putative cystathionine gamma-synthase protein TERM 3180 4155993 - 4156004 + G 76 -2.2 -4.8622 | overlap 4155991 GACGAGTTGCAGAGC TGCG AGGC TGCA TTTTTCATTGCCGCC XOO3894 4155294 - 4156262 + | putative transposase TERM 3181 4157150 - 4157131 - g 77 -11.4 -3.75817 | gap 1, overlap 4157129 GTGGCACAAGAAAGA CGG-CGGGC TGG GCCCGTCCG AGCTCAAGCGCCTGC tnp 4156997 - 4157266 + | transposase TERM 3182 4157272 - 4157260 - T 77 -2.6 -5.00616 | opp_overlap 4157267, overlap 4157261 4157262 GGTGGTCGCAAAAAA GCGC TGAGG ACGC CCCAGAAACGCAACT TERM 3183 4157336 - 4157364 + T 93 -9.5 -4.78572 | GCGAGCGGCGTGCAT TGCAGATCGTGGC AAT GTCGCGGTCAGCA TTTTCTTAGTTCCAC XOO3898 4158874 - 4158644 - | putative transposase XOO3899 4159073 - 4159621 + | putative ISXo8 transposase TERM 3184 4159770 - 4159782 + F 71 -4.8 -4.4773 | TGCGGTTTTGGCGTG CTGG AACTG CCAG TTTTCGTTACTCTAC cca 4160649 - 4161881 + | multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase TERM 3185 4163089 - 4163115 + T 72 -7.3 -4.18494 | gap 1, overlap 4163089 CAACGCTGTTGAGGA C-CTCCTCGGAG AAGA CTTCGAGGGGCG TTTTGAATCCAAGTA XOO3905 4165209 - 4164241 - | putative transposase TERM 3186 4164510 - 4164499 - G 76 -2.2 -4.8622 | overlap 4164500 GGCGGCAATGAAAAA TGCA GCCT CGCA GCTCTGCAACTCGTC TERM 3187 4165513 - 4165488 - R 100 -20.5 -4.16842 | GCTACTTTGAATAAA GGGCGGCTGCA CTAG TGCAGCCGCCC GAGCAGCGATCACAG fyuA 4168512 - 4167070 - | TonB-dependent receptor TERM 3188 4169003 - 4169018 + G 74 -4.6 -4.55697 | GGCGTTGGAGATCTC GCGCTG GCCA CAGGGC TTTGTTTGTCCGCGT TERM 3189 4169736 - 4169752 + G 74 -10.1 -3.70902 | opp_overlap 4169731, overlap 4169737 CTGGCAGAGACGATG TGGCGGT TCA ACCGCCG TTTCGATCTGACCCG XOO3910 4168851 - 4169867 + | transposase TERM 3190 4170102 - 4170058 - f 76 -10.7 -3.79841 | CAAGAATGAAGAGAA CAGGCG-ACCGGGTCCGGCAG GCCCA CTGCCTG-CGCGGTGCGCCCG ATGGCGGCAACCGGC TERM 3191 4170147 - 4170180 + F 79 -11.1 -3.89881 | overlap 4170176 AGTGCGGGGATAATG TCGATGTCGATGTCG ATGT CGATGTCGATGTCGA TTTGTCGGCCTTGCT hmsH 4171088 - 4173238 + | HmsH TERM 3192 4174022 - 4173995 - gf 74 -12.8 -3.26433 | gap 1, opp_overlap 4173994 4173988, overlap 4173983 CAACCAGATGAGCAA CGACATCGCCGAG CAA CTCGGC-ATGCCG GTCTCCTTCGATCTG hmsF 4173147 - 4175138 + | HmsF hmsR 4175140 - 4176393 + | N-glycosyltransferase PgaC XOO3914 4176390 - 4176995 + | hypothetical protein nagA 4178575 - 4177415 - | N-acetylglucosamine-6-phosphate deacetylase glmS 4179600 - 4178572 - | glucosamine-fructose-6-phosphate aminotransferase XOO3918 4180700 - 4179597 - | LacI family transcription regulator gluP 4181991 - 4180714 - | glucose-galactose transporter TERM 3193 4181514 - 4181489 - G 75 -9.7 -4.03413 | ACCTGCGCAGACAAA TCGCCGATGCC GTGC AGCACCAGCGA GCCGATCAGGATCGG XOO3920 4182902 - 4182036 - | GntR family transcriptional regulator XOO3921 4184106 - 4183018 - | hypothetical protein XOO3922 4186579 - 4184318 - | N-acetylglucosaminidase TERM 3194 4185670 - 4185647 - G 80 -13.8 -3.31461 | GATGGAGCGGTACAA CGCCTGCCCG TAGG CGGCCAGGCG GGCATCGCGTTGCGC TERM 3195 4185760 - 4185786 + g 81 -12.2 -3.90291 | overlap 4185758 CGGCGGCCACGTCGC TGCCGTCGTCGG CCA CCGGCGGCAGCA TTTCGTTGAAGGCAT lacZ 4189627 - 4186730 - | truncated beta-galactosidase TERM 3196 4186930 - 4186898 - G 73 -9.7 -3.91897 | opp_overlap 4186910, overlap 4186900 GCGGCCATCCAGAAA TACCTGCGCCGGCCC GCT GAGGCGGCCCAGGTC GAGCATGCCGCCGTG TERM 3197 4186928 - 4186900 - G 75 -12.3 -3.5511 | opp_overlap 4186910, overlap 4186898 GGCCATCCAGAAATA CCTGCGCCGGCCC GCT GAGGCGGCCCAGG TCGAGCATGCCGCCG TERM 3198 4188612 - 4188581 - G 88 -2.1 -5.28176 | overlap 4188583 CCCATTGAGAAAAAA TCCGTGGTCGGCG TCGAAG CGCAGGCTACGAA AACCAACCTCGCACG TERM 3199 4189322 - 4189296 - G 74 -5.2 -4.46212 | gap 1, overlap 4189298 TGCTCCACCACAAAA TCGTGCGGCAA TTGCAG TTGCCGC-CAA CCGGTATCGTCGAAG iroN 4192468 - 4189778 - | TonB-dependent receptor TERM 3200 4191077 - 4191057 - G 88 -8.2 -4.65446 | opp_overlap 4191070 AGCAGATACAGAAAA TCGCGCCG GCGCA CGTCGCGA TCAAAGGTTTCCCGA XOO3925 4193718 - 4192750 - | transposase TERM 3201 4192779 - 4192805 + g 71 -7.3 -4.18494 | gap 1, overlap 4192779 CAACGCTGTTGAGGA C-CTCCTCGGAG AAGA CTTCGAGGGGCG TTTTGAATCCAAGTA XOO3926 4193909 - 4194193 + | IS1404 transposase XOO3928 4195432 - 4194197 - | transposase XOO3931 4198065 - 4196881 - | hypothetical protein TERM 3202 4197098 - 4197085 - G 78 -3.7 -4.7497 | GTTACCGAGTAAAAA GCTCG CCTG CGTGC AGTAACCGGCCAGCT ptr1 4198133 - 4198870 + | pteridine reductase folK 4199554 - 4199039 - | 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine XOO3934 4201148 - 4199646 - | histidine kinase-response regulator hybrid protein XOO3935 4201592 - 4201152 - | two-component system regulatory protein XOO3936 4203448 - 4201589 - | two-component system sensor protein TERM 3203 4203629 - 4203608 - R 100 -15.9 -5.7946 | CTCGGAACAAAAAAA GGCGCACTC CGCG GAGTGCGCC TGGTGCTCGGGTCCG XOO3937 4204057 - 4203686 - | hypothetical protein ydgJ 4204208 - 4205260 + | oxidoreductase gndA 4206541 - 4205600 - | 6-phosphogluconate dehydrogenase-like protein XOO3940 4207977 - 4206562 - | hypothetical protein TERM 3204 4208035 - 4208017 - R 100 -17.4 -3.95073 | opp_overlap 4208010 CCTCAGACGTAGAAA GCCCCGGC ATG GCCGGGGC TCGCAACTCAGTTCA XOO3941 4208520 - 4208071 - | hypothetical protein XOO3942 4209373 - 4208576 - | hypothetical protein XOO3943 4209690 - 4209412 - | hypothetical protein TERM 3205 4211006 - 4210981 - R 83 -7.5 -4.56597 | CGTCGGGGCGAAAAA GCATGATCGCA TCGT TGCGCTCCTGC AACGGATGATGACGC XOO3946 4211563 - 4211255 - | hypothetical protein pbeF 4213046 - 4211586 - | putative nicotinate phosphoribosyltransferase XOO3948 4214167 - 4213112 - | bifunctional nicotinamide mononucleotide adenylyltransferase/ADP-ribose pyrophosphatase TERM 3206 4214339 - 4214363 + Gr 95 -9.9 -4.57073 | overlap 4214342 ACTACATGCCACGCT CATCGCTACGC GTT GCGTCGCGTTG TTTTTCGCCGCCATC TERM 3207 4214342 - 4214360 + Gr 95 -10.2 -4.40561 | overlap 4214339 ACATGCCACGCTCAT CGCTACGC GTT GCGTCGCG TTGTTTTTCGCCGCC TERM 3208 4214859 - 4214883 + Gr 72 -11.4 -3.48924 | opp_overlap 4214856, overlap 4214860 4214862 GATCAGGATGAAGCC GCACGCGAGC ACGTC GCTCGCGTGA TTCTCTCGCGCATCG TERM 3209 4214860 - 4214882 + Gr 75 -14.9 -2.6914 | opp_overlap 4214856, overlap 4214859 4214862 ATCAGGATGAAGCCG CACGCGAGC ACGTC GCTCGCGTG ATTCTCTCGCGCATC XOO3949 4214166 - 4215194 + | hypothetical protein TERM 3210 4215417 - 4215449 + Tr 100 -25.1 -4.09243 | opp_overlap 4215423, overlap 4215423 ACGACATGCCGCCAA CGAAAATGCCACCGC AGT GCGGTGGCATTTTCG TTTTCAAACACTGTC TERM 3211 4215423 - 4215443 + Tr 100 -16.9 -4.67038 | opp_overlap 4215423, overlap 4215417 TGCCGCCAACGAAAA TGCCACCGC AGT GCGGTGGCA TTTTCGTTTTCAAAC TERM 3212 4215443 - 4215423 - TR 100 -16.9 -4.4078 | opp_overlap 4215423 4215417 TGCCGCCAACGAAAA TGCCACCGC AGT GCGGTGGCA TTTTCGTTTTCAAAC prc 4217669 - 4215486 - | tail-specific protease TERM 3213 4217879 - 4217845 - R 76 -9.8 -3.86897 | opp_overlap 4217845 4217844, overlap 4217848 CGCATGGGTCAGAAA CGATTCGGCCCCGCGC AGC GCGCAGGACCGGAAGG GGTTTTGTTCGACTG TERM 3214 4217876 - 4217848 - R 78 -14.5 -3.01125 | opp_overlap 4217845 4217844, overlap 4217845 ATGGGTCAGAAACGA TTCGGCCCCGCGC AGC GCGCAGGACCGGA AGGGGTTTTGTTCGA TERM 3215 4218654 - 4218676 + r 73 -11.2 -3.63968 | overlap 4218672 4218673 CGAGATGACTGAGCT CGGGCCGGGT GCC ATCCGGCGCG TTTCGCGGTTTGGAA TERM 3216 4218944 - 4218966 + r 71 -5.6 -4.30576 | gap 1, overlap 4218945 CTTGGCGCAAAGTCT C-GTCGCGA AGGGGC TCGCGACTG TTTTCCTCGTACCAA TERM 3217 4218945 - 4218964 + r 71 -9.3 -3.7574 | overlap 4218944 TTGGCGCAAAGTCTC GTCGCGA AGGGGC TCGCGAC TGTTTTCCTCGTACC xphIM 4220839 - 4219259 - | methyltransferase homolog M.XphI TERM 3218 4219442 - 4219393 - G 73 -9.1 -3.91897 | opp_overlap 4219395 GCTCGTATGCAGAAA CCGCGACGCTACCGCTCAGGC AACGGAAG GCCCGATCGGCGGCCTCGCTG TTGAGAAACGCCGCA lipA 4222328 - 4221315 - | lipoyl synthase lipB 4223041 - 4222343 - | lipoyltransferase TERM 3219 4222579 - 4222563 - G 71 -10.1 -3.56099 | opp_overlap 4222571 GACAACCCGTGGAAA GTGCAGC CAC GCCGCAC GCGGATGCCGAGCGC XOO3955 4224087 - 4223434 - | hypothetical protein TERM 3220 4224337 - 4224366 + r 84 -13.7 -3.78329 | opp_overlap 4224337 4224344, overlap 4224344 CCCCAATCCCGCAAA CAAAAAAGCCGAC GAAA GCCGGCTTTTTTG TTTGAATTACTCCGA TERM 3221 4224366 - 4224337 - R 86 -15.9 -3.57561 | opp_overlap 4224337 4224344, overlap 4224344 CCCCAATCCCGCAAA CAAAAAAGCCGAC GAAA GCCGGCTTTTTTG TTTGAATTACTCCGA TERM 3222 4224359 - 4224344 - R 100 -8.2 -5.63517 | opp_overlap 4224337 4224344, overlap 4224337 CCCGCAAACAAAAAA GCCGAC GAAA GCCGGC TTTTTTGTTTGAATT TERM 3223 4224344 - 4224359 + r 100 -6 -5.67283 | opp_overlap 4224344 4224337, overlap 4224337 CCCGCAAACAAAAAA GCCGAC GAAA GCCGGC TTTTTTGTTTGAATT dacC 4225578 - 4224373 - | penicillin-binding protein 6 rlpA 4227494 - 4226079 - | rare lipoprotein A TERM 3224 4226238 - 4226265 + g 71 -7.7 -4.09685 | overlap 4226239 GGCAATTCCCGCCGA CGCCAATTGCG ACAGCG CGCGATTGGCA TTTTCGCGGCTGGCG mltB 4228630 - 4227491 - | membrane-bound lytic transglycosylase TERM 3225 4230221 - 4230236 + r 93 -3.2 -5.58454 | opp_overlap 4230221, overlap 4230222 TTGTTCCAGTACATA CCGAAG CTTT CTTCGA TTTTTTTGATGTCGA TERM 3226 4232819 - 4232835 + r 75 -3.7 -4.74706 | GCTTGCCAATGACCA TGCCT TTTTATT AGGCA TTTTTAGCTGTTGGC XOO3964 4236273 - 4234117 - | hypothetical protein XOO3965 4236788 - 4236249 - | hypothetical protein XOO3966 4240043 - 4238868 - | hypothetical protein mrdB 4241730 - 4240612 - | rod shape-determining protein TERM 3227 4240800 - 4240781 - G 100 -7.8 -5.25893 | gap 1, overlap 4240785 ACATAGACGAAAAAA GCCAG-GCC GGT GGCGCCGGC AACCAGGCGCGAATA TERM 3228 4241589 - 4241612 + g 72 -8.8 -4.07568 | gap 1, opp_overlap 4241560, overlap 4241589 CCTGCAACAGGTGCT G-GCCGTTGGC AGT GCCACCGGCGC TTTTGAGCACCGACA mrdA 4243787 - 4241727 - | penicillin-binding protein 2 mreD 4244276 - 4243791 - | rod shape-determining protein TERM 3229 4244016 - 4243995 - G 74 -11.5 -3.64487 | CGACATCGGGAAGAA GCGCATCCG CGCG CGGAAGCGC TGCAGGATGAAGGTC mreB 4246943 - 4245792 - | rod shape-determining protein TERM 3230 4246518 - 4246545 + g 74 -2.6 -4.7373 | overlap 4246520 CAGCACGCGCGGGCT GGGGCGCAGG AACCGCGA CTTGTGCACC TTTTTGATGAAGTGC TERM 3231 4247072 - 4247087 + H 71 -6 -4.25104 | CGTCCCGCTGCCATG CCCGGC AATT GGCGGG TTTTCCTAACGCAAA XOO3971 4247114 - 4248046 + | sugar kinase TERM 3232 4248557 - 4248546 - f 74 -2.2 -4.8622 | overlap 4248547 GGCGGCAATGAAAAA TGCA GCCT CGCA GCTCTGCAACTCGTC XOO3974 4249214 - 4249669 + | putative transposase XOO3975 4249635 - 4250111 + | putative transposase XOO3976 4250598 - 4250170 - | hypothetical protein XOO3977 4250782 - 4250582 - | hypothetical protein XOO3978 4251279 - 4250869 - | IS1478 transposase codA 4251707 - 4251252 - | cytosine deaminase XOO3980 4252297 - 4251704 - | hypothetical protein tISRso5 4253305 - 4252574 - | ISRSO5-transposase protein XOO3983 4254531 - 4253455 - | multidrug resistance efflux pump ubiE 4256237 - 4257037 + | ubiquinone/menaquinone biosynthesis methyltransferase TERM 3233 4257118 - 4257133 + F 74 -5.4 -4.55295 | gap 1, overlap 4257115 ATGGCGTTGCTTGTC GCAG-CG TAG CGACTGC TTTGTTTCTGAGACC XOO3988 4257135 - 4258100 + | response regulator pepN 4258162 - 4260234 + | aminopeptidase TERM 3234 4260278 - 4260306 + F 93 -19 -3.31461 | opp_overlap 4260282, overlap 4260282 CGGCGGCACGGGCAA CAAACGGGGAGC CTTGT GCTCCCCGTTTG TTATCCAAGTCGCTG TERM 3235 4260302 - 4260282 - f 93 -14 -4.16842 | opp_overlap 4260278 4260282 GGCACGGGCAACAAA CGGGGAGC CTTGT GCTCCCCG TTTGTTATCCAAGTC TERM 3236 4260282 - 4260302 + F 100 -14 -4.31433 | opp_overlap 4260282, overlap 4260278 GGCACGGGCAACAAA CGGGGAGC CTTGT GCTCCCCG TTTGTTATCCAAGTC XOO3990 4260304 - 4261125 + | hypothetical protein XOO3991 4261425 - 4262048 + | hypothetical protein hslU 4263589 - 4262222 - | ATP-dependent protease ATP-binding subunit hslV 4264251 - 4263700 - | ATP-dependent protease peptidase subunit xerC 4265810 - 4264767 - | site-specific tyrosine recombinase XerC TERM 3237 4265381 - 4265397 + g 71 -13.7 -2.70932 | GTGCCGCCGCCGGAC TGGCCGC GAT GCGGCCA TGCTTGAGCAACCAC XOO3996 4266564 - 4265884 - | hypothetical protein dapF 4267406 - 4266552 - | diaminopimelate epimerase TERM 3238 4266950 - 4266930 - G 74 -10.4 -3.75665 | CGACACCGCACCAAA GCGCACGG TATCG CCGTGCAC CGGCAGCGCATATTC TERM 3239 4267175 - 4267146 - G 73 -14.3 -2.87564 | gap 1, opp_overlap 4267166 CCAGGCGGCGACACA GC-GCGCGCCATTG CCG CATTGGCGCGCTGC CGAGCCGTCGGAATT XOO3998 4268124 - 4267690 - | hypothetical protein ptrB 4270674 - 4268464 - | protease II; oligopeptidase B TERM 3240 4270954 - 4270979 + G 75 -9.7 -4.03234 | gap 1 GCCGCACGCGGGCTG CCGGCACTACGC GAG GCG-ATTGCCGG TTTCTATGCGCAGCG TERM 3241 4271656 - 4271697 + G 77 -5 -4.64844 | CTGCTGCCGGCGTTG CGCGCACTGGGTTTCGAT ATCGCG GTCGAACCACAAGGCGCG TTTTATCTGTATGCC aspC 4270687 - 4271907 + | hypothetical protein XOO4001 4272154 - 4271996 - | hypothetical protein TERM 3242 4272383 - 4272347 - R 83 -15.1 -3.14931 | GCCATTGCCCAGGAA CGGCCCAGCCAATGCGA TGG CCGCATCGGCCCAGCCG TGTCCGCTCGAAAAA TERM 3243 4272563 - 4272545 - R 70 -13.1 -2.87931 | GTCATGGGTCAGATA GGCCGCG GCGCG CGCGGCC AGCGCACGCATTGCC XOO4002 4274918 - 4272747 - | prolyl oligopeptidase XOO4003 4275246 - 4274908 - | hypothetical protein TERM 3244 4275305 - 4275249 - H 79 -13.6 -3.47941 | CAGGAAGGATCACAA CAGGCCCGCAGGATTGCCGCAGCC CATCTCAGC GGCTGCGACCTTGACGCGGGCCTG TGCGGCGCGCGGTTG XOO4004 4275607 - 4276176 + | outer membrane lipoprotein XOO4005 4277250 - 4276285 - | hypothetical protein TERM 3245 4276567 - 4276551 - G 70 -5.1 -4.36914 | GCGCCCCGGAGAAAA TGCCG TAGGTGG CGGCA AGCTGCTCGTCCAAT XOO4006 4277809 - 4278609 + | hypothetical protein hemC 4280074 - 4279160 - | porphobilinogen deaminase TERM 3246 4280017 - 4280043 + g 72 -8.7 -4.11216 | gap 1 ACGCGGCGGCGACGT GTTCGCTCTGCC AGAG GGC-GAGCGGGC TTTTGCGGGTAGCGA algR 4280842 - 4280105 - | two-component system regulatory protein TERM 3247 4280338 - 4280351 + g 70 -2.3 -4.64676 | CGCCGCGGGTGTGAT GGACG ATGA CGTAC TTTTCTTCGGCCTGC TERM 3248 4280637 - 4280596 - G 71 -12.1 -3.21395 | gap 1, overlap 4280594 AGGCGGTGCAGAACA CCAC-CGCCGGCGGCGGCTG GCT CTGCCGCAGCAAGCGCGCGG TTCCCAAGCCGTCGA algZ 4281925 - 4280873 - | two-component system sensor protein TERM 3249 4281549 - 4281501 - G 81 -11 -4.12532 | gap 1, overlap 4281503 TCGCTGACATAGAAA TAGCGCAGCGCCAACGCGGTGAT CAGC ACCACCGTGCCCGCGCTGC-CCA GGGTGAACCGCCAGA TERM 3250 4281548 - 4281503 - G 84 -13.9 -3.65996 | overlap 4281501 GCTGACATAGAAATA GCGCAGCGCCAACGCGGTGAT CAGC ACCACCGTGCCCGCGCTGCCC AGGGTGAACCGCCAG XOO4010 4282598 - 4281930 - | carboxylesterase hrpM 4284687 - 4282750 - | glucosyltransferase MdoH TERM 3251 4282873 - 4282845 - G 100 -7.9 -5.15969 | overlap 4282846 4282847 CGGGAATGCAAAAAA TGCCGGCGCGGCG TAG CGCCATGCCGGTG CGACGCAGCGAGGTC TERM 3252 4282872 - 4282846 - G 77 -11.4 -3.68859 | overlap 4282845 4282847 GGGAATGCAAAAAAT GCCGGCGCGGCG TAG CGCCATGCCGGT GCGACGCAGCGAGGT TERM 3253 4282871 - 4282847 - G 77 -14.9 -2.80592 | overlap 4282846 4282845 GGAATGCAAAAAATG CCGGCGCGGCG TAG CGCCATGCCGG TGCGACGCAGCGAGG TERM 3254 4283386 - 4283338 - G 70 -11.6 -3.32963 | gap 1, overlap 4283324 ACGGGCAGGCGAGAA CGGCAGGTCGCCGGCCAG-ATCG ATAC CGACGCCGGCCAGCGGAATGCCG ATGCCGATCAGCATC TERM 3255 4284084 - 4284057 - G 79 -6.8 -4.52589 | GGCGGCGATAGAAAA TGCGGCCGTGAC CATC GACTCGGTCGCA CAGTTCGCTGTACAC TERM 3256 4285251 - 4285281 + H 73 -6.7 -4.2558 | gap 1 GCCGATTCCGAGCAC CGGCCGCGCCCGCC TGGT GGCTG-CGCAGTCG TTTTGCTAGCCGCTC XOO4012 4285387 - 4285833 + | transposase XOO4015 4288140 - 4286491 - | aminopeptidase TERM 3257 4287002 - 4287016 + g 70 -2.7 -4.63932 | GACGCGTAGAACTCC GAGCC CAGCA GGCCC TTTTCTTCGGCGGTG TERM 3258 4287091 - 4287118 + g 72 -9 -4.07568 | opp_overlap 4287080 GAAACCGCGCGCCAG CTCCAGCAGCGC GGCG GTGCCGCTGGCG TTTTCCAGCGCACCG TERM 3259 4288906 - 4288891 - R 83 -7.5 -4.59853 | overlap 4288901 GTAATTCTGTAAAAA GCGCG CAAAAC CGCGC AGCATCGCCTGCGCT TERM 3260 4288922 - 4288901 - R 72 -7.2 -4.14615 | overlap 4288891 AAAAAGCGCGCAAAA CCGCGCAG CATCGC CTGCGCTG CACTGCCGGGTATGC ybaR 4291060 - 4289531 - | sulfate permease TERM 3261 4291106 - 4291128 + H 74 -5.5 -4.52589 | gap 1, opp_overlap 4291094, overlap 4291096 TCACCCGCAGCTTGC GCGTCATCGG TGGG CCGCTG-CGC TTTTCTGTGGACACC TERM 3262 4291846 - 4291822 - g 81 -12.7 -3.65522 | CACCGACTGGAACAA GGCCGCCGAGC GTG GCGCGGCCGCC GTCCTGGCGGTAGCG engXCA 4291226 - 4292674 + | cellulase TERM 3263 4293218 - 4293185 - g 81 -9.4 -4.29396 | AATGACCCAGCAAAA CGCCGCACTGGTGG AAGAGG CCACCGCAGCGGCG CGCAGCATGGAAGAC tsr 4293156 - 4293383 + | chemotaxis protein TERM 3264 4293467 - 4293511 + T 78 -6.3 -4.63932 | ACGCGGGGTACATGC CGATTCCGAGCACCGGCAG CGCCCGC CTGGCGGTGAACGCAGTCG TTTTCTTGGCCGCTC TERM 3265 4293536 - 4293577 + T 100 -27.4 -3.53811 | overlap 4293537 CCGCTCCAAGTGCTA CCGCCTGCCACGCAGGGG CGCTGC CCCCTGCGTGGCAGGCGA TTTCGGCAAAATGCG TERM 3266 4293537 - 4293576 + T 100 -30.9 -2.72144 | overlap 4293536 CGCTCCAAGTGCTAC CGCCTGCCACGCAGGGG CGCTGC CCCCTGCGTGGCAGGCG ATTTCGGCAAAATGC TERM 3267 4293679 - 4293633 - T 79 -10.8 -3.90112 | gap 1, overlap 4293636 GGGCTTGTAACGAAA GAGC-CAGCTGCCGCGCATCC ATGCGA GGTTGCGCGGCAGTCGTGGTC CAACTACAGCGTCGC XOO4021 4296722 - 4293909 - | histidine kinase-response regulator hybrid protein TERM 3268 4294533 - 4294513 - G 72 -6.7 -4.2704 | opp_overlap 4294515 4294522 GCCATCAGGAAGAAA CCCTGCGCC TGC GTCGCAGTG CCGTGCATTTCCGGC TERM 3269 4294726 - 4294736 + g 72 -8.2 -4.15044 | TCCATACCGAGCCAG GCGC GAT GCGC TTTATTGGCGAACAG TERM 3270 4296345 - 4296297 - G 72 -6.6 -4.25104 | gap 2, overlap 4296300 CGCGTGGGAGCAAAA CGAGGCGCTGCGCGG-AGTG-CCT TCC AGGTCGCTGCCGCAACGCGCCTTG AACCACTGGCGGTCG TERM 3271 4297043 - 4297083 + G 75 -6.7 -4.41616 | overlap 4297044 4297045 TTTGCGCACCTGTTC GAGCACCTGATGTTCTCCG GTT CGGAGAACAACAAGAGCAG TTTCTTTGCGCCGCT TERM 3272 4297045 - 4297081 + G 70 -13.7 -2.54371 | overlap 4297044 4297043 TGCGCACCTGTTCGA GCACCTGATGTTCTCCG GTT CGGAGAACAACAAGAGC AGTTTCTTTGCGCCG TERM 3273 4298597 - 4298620 + G 70 -11 -3.30441 | opp_overlap 4298596 GATGCGCTCAACGAC CAGCTGCAAC CGTC GCTGCAGCTG TTCTCCGACATCGTG XOO4022 4296788 - 4299658 + | zinc protease phS 4300062 - 4301135 + | histidine kinase-response regulator hybrid protein XOO4024 4302310 - 4301174 - | hypothetical protein XOO4026 4303211 - 4302765 - | transposase XOO4027 4303980 - 4303858 - | endonuclease TERM 3274 4304404 - 4304449 + G 72 -3.3 -4.66163 | gap 2, overlap 4304408 4304410 ATCGTCCGCATCGCG CCAGCA-CCTAC-GCGCGCTG GGCCGA CAGCGTGCTGGAGGATGTTCG TTTTTCGGTCAAGCT TERM 3275 4304901 - 4304848 - g 87 -17.3 -2.83164 | gap 1, overlap 4304897 GCAGCTACGACGAGA CCGCGTTGCAGGCGTTGGCCGCTGCG GTG CGCGCCGGCCCAC-CCAGCAACGCGC AGCCGCTGGCCGAAC XOO4029 4304166 - 4305017 + | hypothetical protein treA 4305271 - 4306944 + | trehalase TERM 3276 4306948 - 4306984 + F 84 -15.1 -3.36671 | GCCGCGCGCTGAGGA CTGTGCCGCTGCTGCGC AGT GCGTGGTAGCGGCAGGG TTCTACCATTGGCGT TERM 3277 4307429 - 4307481 + F 100 -21.6 -3.08344 | opp_overlap 4307444, overlap 4307444 4307475 4307476 CTGGCCAGCCGCTCA TC-GTCGCCGACAAAACTCCCAGGCG CTG TGC-TGGGAGTTTTGTCGGCGACAGC TCTCTGTCATTTGGG TERM 3278 4307465 - 4307444 - f 76 -7.3 -4.36914 | opp_overlap 4307429 4307444 TCGTCGCCGACAAAA CTCCCAG GCGCTGTG CTGGGAG TTTTGTCGGCGACAG TERM 3279 4307444 - 4307465 + F 76 -7.3 -4.36914 | gap 1, opp_overlap 4307444, overlap 4307429 TCGTCGCCGACAAAA CTCCCAGGCG CTG TGC-TGGGAG TTTTGTCGGCGACAG XOO4031 4308656 - 4308940 + | hypothetical protein corA 4310055 - 4309144 - | magnesium and cobalt transport protein TERM 3280 4311218 - 4311198 - g 100 -3.9 -6.23545 | TGGAAAGAAAAAAAA CAGATACCG TTG CAGCGTCTG CCCGCCGGCGCGGCC XOO4033 4310430 - 4311296 + | hypothetical protein TERM 3281 4311361 - 4311322 - T 83 -17.2 -2.64616 | overlap 4311324 CGCGCATCGACATCA CAGCTCGCAGCGTGCG CTCACCGC CGCACGCTGCACGCTG CACACGGTATGAGTT TERM 3282 4311359 - 4311324 - T 74 -14 -2.8655 | overlap 4311322 CGCATCGACATCACA GCTCGCAGCGTGCG CTCACCGC CGCACGCTGCACGC TGCACACGGTATGAG cycA 4312766 - 4311390 - | D-alanine/D-serine/glycine permease TERM 3283 4312510 - 4312494 - G 87 -7.9 -4.84359 | CCATCCGCAGAAAAA TCCGGCC CAC GGCCCGA GCAAGTCGGTGGAGA TERM 3284 4313607 - 4313572 - H 74 -9.6 -3.90112 | overlap 4313605 GGCGGGTCAACGAAA GCGGTCATGAGCCGCA ACGA CGCGGCACACAATCGC CCGGTGCGTGTGGGC XOO4035 4313933 - 4315633 + | 1,4-beta-cellobiosidase XOO4036 4316042 - 4317814 + | cellulase TERM 3285 4317939 - 4317904 - Tf 81 -14 -3.65224 | gap 1 ACTGCATCGGAACAA CGCCAGCG-ACGATGCG CGC CTCATCGAGCGCTGGCG CGTTCGGCGTGCGGC XOO4037 4319019 - 4318090 - | hypothetical protein XOO4038 4319001 - 4320041 + | hypothetical protein XOO4922 4320133 - 4320735 + | hypothetical protein XOO4042 4322081 - 4323172 + | hypothetical protein YXOOp14 4324341 - 4323955 - | hypothetical protein YXOOp15 4324655 - 4324299 - | hypothetical protein XOO4043 4325087 - 4327399 + | dipeptidyl peptidase IV XOO4044 4329541 - 4327595 - | prolyl oligopeptidase family protein TERM 3286 4327926 - 4327911 - G 73 -11.8 -3.33261 | opp_overlap 4327908 GCCCAACGCGCATAA CGCGCG GTAT CGCGCG CCATCATGTCCAGAT TERM 3287 4328072 - 4328044 - G 80 -14.6 -3.05498 | CACCGTACAGACAGA CGCGCGAGGCAT CGGCC ATGCCTTGCGCG ATCGCCCAACGCGTC TERM 3288 4329001 - 4328957 - G 88 -17.8 -3.14931 | gap 1 CCGATCGGTCACGAA GTCCGCACGCCGCACCGGCGC GGTA GCAACGGTGCGGCGC-CGGCC GGTCTGGATATCCAG XOO4045 4329799 - 4330107 + | hypothetical protein TERM 3289 4330180 - 4330137 - f 83 -9.4 -4.3739 | overlap 4330140 GAGCGGCTGACAAAA CGACTGCGCTCACCGCCAGG TGGG CGCGGCGGTGCTCGGAATCG GCATGTACCACGCGT TERM 3290 4330768 - 4330756 - g 71 -10.5 -3.62046 | GCACTGCTGGAACAA CGCGG CAT CCGCG CGCTGCGACGCAAAC XOO4046 4330498 - 4332081 + | oxidoreductase TERM 3291 4332312 - 4332330 + T 100 -9.6 -5.47821 | overlap 4332311 4332310 GTGCCACGCCTGTCG GCAGGGAT GCC ATTCCTGC TTTTTTTGCCTGCGT TERM 3292 4333277 - 4333294 + T 72 -4 -4.61482 | overlap 4333272 4333278 GCTGGGCATAGGCCG CCGGCG TCATTC CGCCGA TTGTTTTTTGGGGCG XOO4047 4334209 - 4333283 - | IS1404 transposase XOO4927 4334325 - 4334062 - | IS1404 transposase XOO4048 4335282 - 4334374 - | threonine aldolase trpE 4336777 - 4335257 - | anthranilate synthase component I TERM 3293 4337044 - 4337073 + r 74 -12.1 -3.53091 | CGTCTGCGCGTTGCG CTTCCGTGCGGCG TACG CCCCGTGCGGAAG TTTGCGGCAACCACT XOO4050 4338322 - 4337393 - | lipid kinase TERM 3294 4338493 - 4338522 + r 100 -14.3 -4.18494 | overlap 4338494 AGCCTCCAATTTTCT TGAAGGCCGCTTC CTCG GGAGCGGCCTTCC TTTTACGTCACGCTG TERM 3295 4338494 - 4338521 + r 90 -17.8 -3.10775 | overlap 4338493 GCCTCCAATTTTCTT GAAGGCCGCTTC CTCG GGAGCGGCCTTC CTTTTACGTCACGCT XOO4051 4339048 - 4338557 - | N-acetyltransferase rpe 4339716 - 4339045 - | ribulose-phosphate 3-epimerase TERM 3296 4339993 - 4340015 + r 100 -9.1 -5.1356 | overlap 4339972 4339970 GCGTGCGTGGCACGG CGCCTGATC CTCTT GACCAGGCG TTTTTATTGGTCCCA XOO4053 4340566 - 4340111 - | hypothetical protein purC 4340643 - 4341575 + | phosphoribosylaminoimidazole-succinocarboxamide synthase TERM 3297 4341868 - 4341853 - T 93 -8.2 -5.07486 | opp_overlap 4341853 GAGCGTGAAGAAAAA GACCGC TTGA GCGGCC TTTGGAGAACGACTC XOO4055 4342840 - 4342364 - | putative transposase XOO4056 4343177 - 4342806 - | putative transposase XOO4057 4344347 - 4343310 - | putative transposase XOO4058 4344440 - 4344694 + | hypothetical protein TERM 3298 4344739 - 4344695 - f 74 -10.1 -3.70919 | gap 2, overlap 4344718 4344719 CCCAAAGCGGAATAA GCGTGATCGCGATGTCTGCAC AACCG GCGCAGAC-CCGCGAG-ACGC AAGTCGCGGCGCCGA XOO4059 4344697 - 4345089 + | lytic enzyme TERM 3299 4345106 - 4345142 + F 91 -16.8 -3.57144 | gap 1, opp_overlap 4345111 4345113, overlap 4345113 CTTTCAGCGATAGAT CAAAAGACGCCGGCCAG GACA TTGGCCGGCGT-TTTTG TTTCCGCATGCACCG TERM 3300 4345138 - 4345111 - f 100 -12.7 -4.39568 | opp_overlap 4345106 4345113, overlap 4345113 AGCGATAGATCAAAA GACGCCGGCCA GGACAT TGGCCGGCGTT TTTGTTTCCGCATGC TERM 3301 4345113 - 4345136 + F 100 -16 -5.27938 | opp_overlap 4345111 4345113, overlap 4345106 CGATAGATCAAAAGA CGCCGGCCAG GACA TTGGCCGGCG TTTTTGTTTCCGCAT TERM 3302 4345136 - 4345113 - f 90 -15.3 -3.79993 | opp_overlap 4345113 4345106, overlap 4345111 CGATAGATCAAAAGA CGCCGGCCA GGACAT TGGCCGGCG TTTTTGTTTCCGCAT TERM 3303 4345646 - 4345676 + F 70 -11.9 -3.14132 | opp_overlap 4345640 GGGGAACAACGCGTC GGCATTGGCCAAT CGTGC ATCGGCCGATGCC TTCATCGCACGCGAC XOO4062 4347185 - 4347697 + | hypothetical protein TERM 3304 4347674 - 4347690 + T 76 -13.7 -3.14211 | TTGGCCAAGGCGTAT CGCCAGC TGG GCTGGCG TTACTAAGAGCCGCT XOO4063 4348076 - 4347723 - | hypothetical protein TERM 3305 4348555 - 4348565 + G 83 -2.4 -5.14477 | overlap 4348548 TGAGCGCACGCGATA ACGC ACC GCGC TTTTTTGCCTATCTA TERM 3306 4349658 - 4349697 + G 84 -17.2 -2.70932 | gap 1 GGCATCGTGCCGGCA TGGACGGTGGCGCCGGTAC TGC GTGCCGGCGCCACTG-CGA TCCTTGGCGACCGCC TERM 3307 4349747 - 4349795 + G 70 -11.1 -3.35996 | opp_overlap 4349767, overlap 4349750 GCTGTGGCATGGCTT CAACGTGCCGCTGGCAATG AGCATCGCCGG CATCGTCGGCGGTACGTTG TTGTACATGGCGCTG TERM 3308 4350135 - 4350170 + G 74 -2.4 -4.82901 | gap 1, overlap 4350140 4350153 GCGGTGCTGGTGCTG GGCG-GCACCGGGCTGG CGG TCAGCCTGACGTTCGTC TTTTTGTCGGCGCCG ndhF 4348236 - 4351064 + | putative monovalent cation/H+ antiporter subunit A phaC 4351061 - 4351438 + | putative monovalent cation/H+ antiporter subunit C TERM 3309 4351728 - 4351760 + G 70 -6.2 -4.32651 | gap 1, overlap 4351757 GGCGTGCCTGCTGCA TGCGTGCGCAGGCTG GGAC CGGCGTGCAC-CGCA TTTTCATGCGTTGTT phaD 4351435 - 4352979 + | putative monovalent cation/H+ antiporter subunit D phaE 4352976 - 4353482 + | putative monovalent cation/H+ antiporter subunit E phaF 4353479 - 4353763 + | putative monovalent cation/H+ antiporter subunit F XOO4069 4353760 - 4354113 + | putative monovalent cation/H+ antiporter subunit G hmgA 4356648 - 4355323 - | homogentisate 1,2-dioxygenase TERM 3310 4356713 - 4356737 + r 70 -9.9 -3.54543 | overlap 4356716 CTTGGGGTGGATCAG GTCCCTCTCCC ATC GAGGGAGGGGC TTTAAGCACGTGCGT XOO4071 4358224 - 4357013 - | 4-hydroxyphenylpyruvate dioxygenase TERM 3311 4357298 - 4357308 + g 79 -2.4 -5.02074 | opp_overlap 4357290, overlap 4357292 4357291 CAGAAAGCTCACGCC AGCG GCG CGCA TTTTTTCCACGCTGG XOO4072 4358254 - 4358742 + | MarR family transcriptional regulator TERM 3312 4359078 - 4359045 - T 93 -16.1 -3.68351 | opp_overlap 4359052, overlap 4359052 TCGGCACGATGTAAA CAGAAAACCCCCGCA TCGC TGCGGGGGTTTTTCG TGTCGCACATCCGTG TERM 3313 4359052 - 4359071 + T 100 -15 -4.8048 | opp_overlap 4359045 4359052 GATGTAAACAGAAAA CCCCCGCA TCGC TGCGGGGG TTTTTCGTGTCGCAC TERM 3314 4359071 - 4359052 - T 100 -15 -4.80455 | opp_overlap 4359052, overlap 4359045 GATGTAAACAGAAAA CCCCCGCA TCGC TGCGGGGG TTTTTCGTGTCGCAC XOO4073 4359704 - 4359099 - | hypothetical protein yhiP 4361209 - 4359701 - | di-tripeptide transporter TERM 3315 4360430 - 4360414 - G 80 -5.1 -4.78572 | overlap 4360416 GGGCAAGGAACAAAA TGGTCAG GAT CCAACCA AGGATGCTGGCGCCG XOO4075 4362546 - 4361653 - | tryptophan 2,3-dioxygenase TERM 3316 4363163 - 4363209 + G 76 -14.3 -3.10796 | gap 1, opp_overlap 4363189 CCTCGGCCGCCGGCA GCAGCTGGCAGGTCACGCCGCT AACA GGCAGCGTG-CCGGCCGGCAGC TATTACCTGATCAAA nucH 4362952 - 4363839 + | nuclease pdhA 4363909 - 4364577 + | pyruvate dehydrogenase E1 alpha subunit TERM 3317 4364783 - 4364761 - g 75 -12.6 -3.53444 | opp_overlap 4364749 GGATGTCGGCGTAAA CGGCGGCGTG TTC CGCGCCACCG CCGGCCTGCAGCAAC pdhB 4364570 - 4365127 + | pyruvate dehydrogenase E1 beta subunit TERM 3318 4365311 - 4365326 + GF 74 -4.6 -4.55697 | GGCGTTGGAGATCTC GCGCTG GCCA CAGGGC TTTGTTTGTCCGCGT TERM 3319 4366043 - 4366059 + G 74 -10.1 -3.70902 | overlap 4366044 CCTGGCAGAGACATG TGGCGGT TCA ACCGCCG TTTCGATCTGACCCG XOO4079 4365159 - 4366070 + | transposase XOO4080 4366040 - 4366174 + | transposase pdhB 4366196 - 4366705 + | pyruvate dehydrogenase E1 beta subunit XOO4082 4366707 - 4367087 + | hypothetical protein XOO4083 4368348 - 4367290 - | hypothetical protein yfcY 4368264 - 4369559 + | acetyl-CoA acetyltransferase TERM 3320 4369912 - 4369945 + G 73 -13.9 -2.87132 | gap 1, overlap 4369930 GTGATTCTGGCCATC GTGTT-GCGCAAGCGC AGC GCGCATGCGCTAACGC TGTGTGCGCAACACG XOO4085 4369546 - 4370199 + | hypothetical protein TERM 3321 4370362 - 4370375 + T 73 -6.7 -4.28994 | overlap 4370359 GCCGCACGTACCTTG CGACT GCGC AGTCG TTTTGATGGCTGCTC TERM 3322 4370588 - 4370616 + T 83 -16.1 -2.94912 | opp_overlap 4370585 ATCAGCCACACACGT GCGGCGGTATG CAGACGA CATACCGCCGC TGTCTCGATTAAAGA hemY 4371890 - 4370625 - | porphyrin biosynthesis protein XOO4087 4372864 - 4371887 - | hypothetical protein hemD 4373771 - 4372968 - | uroporphyrinogen-III synthase lgtB 4373947 - 4374756 + | glycosyltransferase XOO4090 4375240 - 4374893 - | putative transposase XOO4091 4375577 - 4375206 - | putative transposase XOO4092 4376330 - 4375605 - | hypothetical protein XOO4093 4377012 - 4376347 - | hypothetical protein XOO4094 4377812 - 4377060 - | HAD superfamily hydrolase XOO4095 4378290 - 4377850 - | hypothetical protein TERM 3323 4378374 - 4378347 - R 100 -15.6 -5.49809 | TAAACGTCAAAAAAA CGGGAGCGACCC TGGC AGATCGCTCCCG CGTGACCATCCTGTT XOO4096 4378883 - 4378497 - | hypothetical protein XOO4097 4379441 - 4379064 - | hypothetical protein XOO4098 4379849 - 4379652 - | hypothetical protein XOO4099 4380902 - 4380156 - | D-alanyl-D-alanine dipeptidase TERM 3324 4380871 - 4380857 - G 95 -7.8 -5.06414 | opp_overlap 4380860 CGCCTTGAAGAAAAA GCTGCC GCC AGCAGC GCCCTTTCCGAAATA XOO4100 4381801 - 4380995 - | N-acetylmuramoyl-L-alanine amidase TERM 3325 4382361 - 4382304 - g 100 -20 -3.17075 | gap 3, opp_overlap 4382355 CTGGCCGCAACCGAA GTGCGCGCGCGCATCGCGGCCGTGTCGGC CAT GCCGACACGGCCGC--TGTACGC-CGCAG ATGGGCGGCTTCTGG XOO4101 4381905 - 4383437 + | hypothetical protein tcbD 4383434 - 4384531 + | chloromuconate cycloisomerase XOO4103 4385162 - 4384686 - | putative transposase XOO4104 4385499 - 4385128 - | putative transposase TERM 3326 4385896 - 4385932 + G 80 -15.3 -3.05844 | gap 1 TACTACCAGTGCCGG GCGTGCCGGCAT-CAA ACCACC TTGCGTGCCGGCACGC TGTTGCAATCCAGCA XOO4105 4385563 - 4386666 + | putative transposase XOO4107 4387897 - 4387451 - | transposase XOO4108 4388152 - 4388928 + | hypothetical protein XOO4109 4388892 - 4390241 + | cationic amino acid transporter XOO4111 4391090 - 4390644 - | transposase XOO4112 4391267 - 4391548 + | hypothetical protein XOO4113 4391749 - 4392054 + | hypothetical protein TERM 3327 4392087 - 4392057 - T 100 -15.5 -4.16251 | opp_overlap 4392063, overlap 4392060 ACATAAGCGCTAAAA CGACAACGCCACC GTCAA GGTGGCGTTGTTG CAACGTACGATCTGC TERM 3328 4392084 - 4392060 - T 81 -15.8 -3.09718 | opp_overlap 4392063, overlap 4392057 TAAGCGCTAAAACGA CAACGCCACC GTCAA GGTGGCGTTG TTGCAACGTACGATC TERM 3329 4392063 - 4392081 + T 75 -11.7 -3.62597 | opp_overlap 4392060 4392057 GCGCTAAAACGACAA CGCCACC GTCAA GGTGGCG TTGTTGCAACGTACG yiaA 4392543 - 4392109 - | membrane protein TERM 3330 4392664 - 4392654 - H 76 -8.2 -4.15453 | TAAGGTACCTGAAAA CCCG ACG CGGG ACACGGTGCGGGAGG TERM 3331 4393608 - 4393631 + G 79 -5.8 -4.61566 | overlap 4393579 4393601 4393609 4393610 GCCCAAGATCAGCTG GACGCCGGTG ATTT CGCCGGCGGG TTTTGTGATTTACAG yliI 4392670 - 4393896 + | dehydrogenase TERM 3332 4394073 - 4394104 + F 100 -11.4 -4.69053 | opp_overlap 4394072, overlap 4394096 GCCGATTCCGAACAC CGGCCGCGCCCGCC TGGC GGTGAGCGCAGTCG TTTTGTTAGCTGCTA XOO4116 4394279 - 4394809 + | putative transposase TERM 3333 4395084 - 4395120 + GF 81 -15.3 -3.05844 | gap 1, opp_overlap 4395078 TACTACCAATGCCGG GCGTGCCGGCAT-CAA ACCACC TTGCGTGCCGGCACGC TGTTGCAATCGAGCA XOO4117 4394853 - 4395854 + | putative transposase XOO4118 4395809 - 4396417 + | putative transposase XOO4119 4396568 - 4397014 + | transposase XOO4121 4398381 - 4397365 - | transposase TERM 3334 4397496 - 4397480 - G 74 -10.1 -3.70902 | opp_overlap 4397475, overlap 4397481 CGGGTCAGATCGAAA CGGCGGT TGA ACCGCCA CATCGTCTCTGCCAG TERM 3335 4398229 - 4398214 - G 74 -4.6 -4.55697 | ACGCGGACAAACAAA GCCCTG TGGC CAGCGC GAGATCTCCAACGCC tra8 4398393 - 4398863 + | remnant of a transposase gene protein bglX 4401164 - 4398993 - | beta-glucosidase folB 4401817 - 4401392 - | dihydroneopterin aldolase gcp 4402891 - 4401827 - | O-sialoglycoprotein endopeptidase TERM 3336 4403446 - 4403482 + H 76 -13.8 -3.23492 | gap 1, opp_overlap 4403445 4403450 4403452, overlap 4403452 TTACCGGGAACGAAC CCAAGAGCCGGC-ACGC GCAA GCGTCGCCGGCTTTTTG TATTGGTCTGTCATA TERM 3337 4403476 - 4403452 - H 76 -13.6 -3.18134 | gap 1, opp_overlap 4403446 4403452, overlap 4403450 4403445 GGAACGAACCCAAGA GCCGGC-ACGC GCAA GCGTCGCCGGC TTTTTGTATTGGTCT TERM 3338 4403452 - 4403476 + H 100 -13.6 -5.13344 | gap 1, opp_overlap 4403452 4403450 4403445, overlap 4403446 GGAACGAACCCAAGA GCCGGC-ACGC GCAA GCGTCGCCGGC TTTTTGTATTGGTCT XOO4126 4403544 - 4404140 + | hypothetical protein rbn 4405564 - 4406580 + | ribonuclease BN TERM 3339 4406925 - 4406897 - g 90 -18.9 -2.77899 | overlap 4406894 TTTCCTGATGAATTA CGACCGCCTCGAG TTT CTCGACGCGGTCG ACGAGCTGGCCAAGC TERM 3340 4407657 - 4407680 + G 76 -2.2 -4.89233 | overlap 4407675 GAGTCGGTGCTGCCG CGCATGAAGG ATGG CCGCCAGGCG TTTTTCCTGTTCCTG dnaG 4406670 - 4408418 + | DNA primase XOO4129 4409760 - 4408396 - | putative ISXo8 transposase TERM 3341 4411386 - 4411357 - g 100 -12.1 -4.63218 | opp_overlap 4411355 4411358, overlap 4411358 GCGGTTCGAAGAAAA GCCTGGCCACCGG CGTG CCGATGGCCAAGG TGATGTTTGCCGGTG TERM 3342 4411385 - 4411358 - g 88 -15.6 -3.3761 | opp_overlap 4411355 4411358, overlap 4411357 CGGTTCGAAGAAAAG CCTGGCCACCGG CGTG CCGATGGCCAAG GTGATGTTTGCCGGT XOO4130 4410528 - 4411532 + | hypothetical protein TERM 3343 4413269 - 4413241 - g 75 -3.7 -4.66537 | opp_overlap 4413267 4413268, overlap 4413242 4413266 4413267 GCCTGCAACAGAAAA TGCACTCCAGCTG CAA CAGCAAGAACGCC AGCGAATGCGCCAGC XOO4131 4411686 - 4413296 + | disulphide-isomerase coxD 4414587 - 4413685 - | protoheme IX farnesyltransferase XOO4133 4415747 - 4414584 - | hypothetical protein XOO4134 4416333 - 4415758 - | hypothetical protein XOO4135 4416996 - 4416361 - | hypothetical protein TERM 3344 4417121 - 4417098 - gR 78 -4.6 -4.68424 | gap 1, overlap 4417086 CAAGCGACGCAAAAA GGCGT-GCAAT GCC ATCACCACGCC GACTGCACCCGGGGC XOO4136 4416982 - 4417359 + | hypothetical protein cox3 4418334 - 4417459 - | cytochrome C oxidase subunit III cox11 4418969 - 4418373 - | cytochrome C oxidase assembly protein XOO4139 4419145 - 4418966 - | hypothetical protein ctaD 4420724 - 4419120 - | cytochrome C oxidase subunit I ctaC 4421716 - 4420763 - | cytochrome C oxidase subunit II XOO4142 4422270 - 4421728 - | hypothetical protein TERM 3345 4422309 - 4422291 - H 73 -3 -4.72272 | overlap 4422293 TCCGGCGAGCAAAAA TTTGCTGC AGT GCAGCTCA AAATTCGCGTAAATC TERM 3346 4422417 - 4422401 - H 95 -10.8 -4.45485 | ACGACATGCACAAAA CGGCGG GAAAG CCGCCG CTTCCACACAAGTGC TERM 3347 4422852 - 4422821 - g 100 -2.9 -5.86061 | overlap 4422843 GCGCATTAAAAAAAA CGGCCCACAATCC ATCGGG AAATCGCGGGGCG GATGGAACACCAAAA XOO4143 4422469 - 4422915 + | transposase TERM 3348 4424950 - 4424940 - g 76 -2.4 -4.90906 | overlap 4424933 CCAGAACAGGAAAAA CTCC ATG GGCG CCAATCTCGCCAACG TERM 3349 4425745 - 4425780 + G 72 -13.2 -3.14564 | opp_overlap 4425715 4425764, overlap 4425728 CGCGATGCCGCCATC GGCGTGTTGATCGCCG AAAC CGGCGGCCAGAACGCC TTCATCGCCGACTCG TERM 3350 4426224 - 4426189 - g 75 -12.6 -3.53811 | GTGATTCGCTGGAAA GCCGATCAGCTCGACG CCGT CATCGAGCAGATCAAC GCAACCGGTTATGGC putA 4423300 - 4426500 + | bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase XOO4146 4426716 - 4427639 + | IS1404 transposase TERM 3351 4427819 - 4427834 + G 74 -4.6 -4.55697 | GGCGTTGGAGATCTC GCGCTG GCCA CAGGGC TTTGTTTGTCCGCGT XOO4147 4427667 - 4428500 + | transposase TERM 3352 4428552 - 4428568 + G 74 -10.1 -3.70902 | opp_overlap 4428547, overlap 4428553 CTGGCAGAGACGATG TGGCGGT TCA ACCGCCG TTTCGATCTGACCCG XOO4148 4428549 - 4428683 + | transposase bfr 4429166 - 4428696 - | bacterioferritin XOO4150 4429778 - 4429509 - | bacterioferritin-associated ferredoxin nudH 4430422 - 4429805 - | dinucleoside polyphosphate hydrolase TERM 3353 4430205 - 4430250 + g 71 -7.6 -4.15222 | CGATAGCGTAGCCAC CCGGG-CGTGGCGCCGAGCA ATTCCACA TGCTCGG-GCAACAACCCGG TTTCTTCGCGCAACT TERM 3354 4430753 - 4430774 + r 100 -8.7 -5.4505 | opp_overlap 4430753 4430768 CAGCCAAACATGAAA GGTTCGATC GCAA GATCGGGCC TTTTTTGTTGCCCGA TERM 3355 4430930 - 4430898 - R 89 -12.7 -4.19238 | opp_overlap 4430906, overlap 4430901 4430906 CTTCGAACCCCAAAA CGACAAAAGCCCGGC ATG ACCGGGCTTTTGAAG CAGGCGCCCCGGCGA TERM 3356 4430927 - 4430901 - R 89 -17.4 -3.11289 | opp_overlap 4430906, overlap 4430898 4430906 CGAACCCCAAAACGA CAAAAGCCCGGC ATG ACCGGGCTTTTG AAGCAGGCGCCCCGG TERM 3357 4430922 - 4430906 - R 100 -11.5 -4.67635 | opp_overlap 4430906, overlap 4430901 4430898 CCCAAAACGACAAAA GCCCGGC ATG ACCGGGC TTTTGAAGCAGGCGC TERM 3358 4430906 - 4430922 + r 82 -10.8 -4.07568 | opp_overlap 4430906 4430901 4430898 CCCAAAACGACAAAA GCCCGG CATGA CCGGGC TTTTGAAGCAGGCGC rpsI 4431363 - 4430971 - | 30S ribosomal protein S9 rplM 4431795 - 4431367 - | 50S ribosomal protein L13 XOO4154 4431981 - 4432634 + | ubiquinone biosynthesis protein sugE 4433337 - 4432936 - | SugE TERM 3359 4433312 - 4433285 - G 100 -17.8 -5.77853 | AAGGGGTAAAAAAAA GCGACCCAGTGT TTGC ACACTGGGCCGC CGTCGGCTGTGGAAC TERM 3360 4433343 - 4433358 + r 72 -11.8 -3.36492 | opp_overlap 4433337 GCGAAGTCATCGCGT GGCGGG CCGT CCCGCC TTGTGGCGTTGGCGC speD 4434204 - 4433410 - | S-adenosylmethionine decarboxylase TERM 3361 4434993 - 4434971 - g 71 -10.5 -3.61398 | CCGCGTGCTCAAGAA GCTGCAGGC TGACG GCCTGCTGC ATGCACGCGGCAAGA clp 4434342 - 4435034 + | cAMP-regulatory protein TERM 3362 4435080 - 4435037 - T 78 -14.6 -3.03124 | gap 1, opp_overlap 4435054 CGGCACGCGCTAACA CGGCACCACGCAGCCAGTGCC TCG GGCATTGGCTGCGTGCCAC-G TTCGGCAACGATGCA XOO4159 4436134 - 4435355 - | hypothetical protein TERM 3363 4435543 - 4435562 + gT 75 -2.8 -4.81852 | gap 1, overlap 4435546 4435547 TATCGGCATAGCCGC GCTCGCGCA ACA TGCGC-ATC TTTTCTTCGTTATGG trpC 4436861 - 4436064 - | indole-3-glycerol-phosphate synthase TERM 3364 4436776 - 4436743 - GR 72 -7.3 -4.11394 | gap 1, overlap 4436744 ATGGCAGCCGCAAAA CCGCGCGTGAGCGGCA GGT CGGCGCTG-CGCGCGA TCAACTCGGCCAGCG trpD 4438128 - 4436998 - | anthranilate phosphoribosyltransferase XOO4162 4438782 - 4438153 - | hypothetical protein trpG 4439518 - 4438934 - | anthranilate synthase component II XOO4164 4440153 - 4440899 + | hypothetical protein XOO4165 4441060 - 4442046 + | IS1404 transposase ampR 4442318 - 4442094 - | B-lactamase regulatory protein TERM 3365 4442611 - 4442582 - R 93 -20.1 -2.90615 | opp_overlap 4442585, overlap 4442554 4442585 ATTCCGCTGAAACGA CAAGGCCCGCCTC TTGC GAGACGGGCCTTG ATGACTCACGTGCAT TERM 3366 4442608 - 4442585 - R 91 -16 -3.60151 | opp_overlap 4442585, overlap 4442554 4442582 CCGCTGAAACGACAA GGCCCGCCTC TTGC GAGACGGGCC TTGATGACTCACGTG TERM 3367 4442585 - 4442608 + r 76 -13.8 -3.18582 | opp_overlap 4442554 4442585 4442582 CCGCTGAAACGACAA GGCCCGCCTC TTGC GAGACGGGCC TTGATGACTCACGTG icd 4444914 - 4442650 - | isocitrate dehydrogenase TERM 3368 4443676 - 4443646 - G 72 -13.3 -3.14132 | opp_overlap 4443654 CTTCTGCGCCATCAA GCCCACATTGGGC ACCGA GCCCATTGTGGAC GGATCGAACGCGCCG XOO4168 4444978 - 4446783 + | hypothetical protein TERM 3369 4446878 - 4446890 + F 71 -4.8 -4.4773 | overlap 4446878 TGCGGTTTTGGCGTG CTGG AACTG CCAG TTTTAGTTACTCTAC XOO4169 4446932 - 4448308 + | IS1478 transposase XOO4170 4448484 - 4448338 - | transposase XOO4171 4448900 - 4448667 - | ISxac1 transposase XOO4172 4449311 - 4448901 - | ISxac1 transposase XOO4173 4449837 - 4449301 - | ISxac1 transposase XOO4174 4450036 - 4449938 - | putative ISXo8 transposase XOO4175 4450166 - 4450059 - | putative ISXo8 transposase XOO4178 4450998 - 4450528 - | putative transposase XOO4179 4451212 - 4450970 - | hypothetical protein XOO4180 4451910 - 4451299 - | putative ISXo8 transposase XOO4181 4453284 - 4452217 - | putative transposase TERM 3370 4452585 - 4452574 - G 76 -2.2 -4.8622 | overlap 4452575 GGCGGCAATGAAAAA TGCA GCCT CGCA GCTCTGCAACTCGTC TERM 3371 4454398 - 4454372 - g 71 -7.3 -4.18494 | gap 1, overlap 4454373 TACTTGGATTCAAAA CGCCCCTCGAAG TCTT CTCCGAGGAG-G TCCTCAAAAGCGTTG XOO4182 4453468 - 4454427 + | hypothetical protein TERM 3372 4454761 - 4454737 - T 76 -5.7 -4.59773 | opp_overlap 4454740 GCGCACGGCCAAAAA CAACGATTTGA GCG CCGAATCGTCG TTGGGGAAAATACGC TERM 3373 4455669 - 4455696 + T 70 -12 -3.12668 | gap 1 CGTTGCCGCCTGAGC GCCCATGCGGCGC ATG GC-CCACATGGGC TTACATCTCCGCCTC tnpX1 4455861 - 4455697 - | IS1113 transposase TERM 3374 4455969 - 4455994 + r 72 -7.5 -4.15565 | gap 1, overlap 4455968 CCGAACATGCGTGGG CCCCGCG-TGCC GTC GGCATCGTGGCG TTTTGCAATGCTGGG queF 4457087 - 4456272 - | 7-cyano-7-deazaguanine reductase XOO4186 4457198 - 4457839 + | transposase amaA 4459168 - 4457846 - | N-acyl-L-amino acid amidohydrolase TERM 3375 4457961 - 4457904 - G 72 -11.4 -3.5393 | gap 3, opp_overlap 4457918 4457921 AGCAGCGCGCGCAAA CCGACATCCAGCGACGATTCGTCCAGCAG GAA CTGC-GG-CGAATGGTTGCTGGGCG-CGG TCGCCGGGTCGATGC TERM 3376 4460635 - 4460618 - g 82 -5.5 -4.82901 | opp_overlap 4460629 4460632, overlap 4460619 CGCGCGGGACAAAAA GGGCC GTGGTGGT GGCCC CGGCGGCCGCCTGGG mtrC 4459422 - 4460666 + | membrane fusion protein precursor TERM 3377 4460707 - 4460727 + F 73 -12.5 -3.19018 | opp_overlap 4460689 CCGTCGCCGATGTGC GTCGGCGCT GCA GGCGCCGGC TTCGCTTGACGTCTT acrD 4460759 - 4464007 + | acriflavin resistance protein TERM 3378 4464171 - 4464199 + G 77 -8.8 -4.29227 | opp_overlap 4464167 CCCTTCATCAAGCGC CCGATCGGCACC TCGTT GCTGGCGATCGG TTTGTTCGTGATTGG TERM 3379 4465009 - 4464975 - g 74 -11.3 -3.66178 | TGGTTCAACGGCAAA CCGGCGGTGGTGATG TATGC CTTCACCCGCGCCGG CGCCAACATCGTCGA TERM 3380 4465454 - 4465475 + G 79 -11.5 -3.88291 | CACCATCGTCTCGAT CACCGCCTC GCTG GTGGCGGTG TTTATCCCGATGCTG TERM 3381 4466014 - 4465994 - g 72 -3.1 -4.62783 | overlap 4465981 4465995 4466005 CATCGAGCTGAAAAA GCGCGATGA AGG CCGTCGCGA CACCACCGCGGACGT TERM 3382 4466291 - 4466313 + G 71 -10.5 -3.6682 | overlap 4466311 CATCGTGATCGACCG CGCCAAGGC TGCGC GCCTGGGCG TTTCAGTCGGTGCCA acrA 4464072 - 4467281 + | acriflavin resistance protein XOO4191 4469019 - 4467571 - | hypothetical protein XOO4192 4469720 - 4469268 - | putative transposase XOO4193 4470699 - 4469683 - | transposase TERM 3383 4469814 - 4469798 - GH 74 -10.1 -3.70902 | opp_overlap 4469793 4469810, overlap 4469799 CGGGTCAGATCGAAA CGGCGGT TGA ACCGCCA CATCGTCTCTGCCAG TERM 3384 4470547 - 4470532 - GH 74 -4.6 -4.55697 | ACGCGGACAAACAAA GCCCTG TGGC CAGTGC GAGATCTCCAACGCC XOO4194 4471039 - 4471581 + | hypothetical protein XOO4195 4471583 - 4472032 + | hypothetical protein TERM 3385 4472344 - 4472315 - g 88 -9.3 -4.59773 | gap 1, overlap 4472316 GCCGATTTCGAAAAA GGCCACATTGCCGG CAG CCGG-AACGTGGCA ATGGCCAAGTTCGAC TERM 3386 4472343 - 4472316 - g 77 -12.8 -3.35542 | gap 1, overlap 4472315 CCGATTTCGAAAAAG GCCACATTGCCGG CAG CCGG-AACGTGGC AATGGCCAAGTTCGA TERM 3387 4472494 - 4472459 - g 100 -8.3 -5.04987 | gap 1 AAGACGCTGAAAAAA GCTGGCTTCGAG-CAG GTGTA CTGGCTCGAAGGCGGC GTCGCCGCTTGGCAG XOO4196 4472108 - 4472542 + | hypothetical protein TERM 3388 4472580 - 4472596 + F 74 -10.1 -3.72363 | overlap 4472581 AAGCCCCCATTGCTG GCGTGAG AGA CTCGCGC TTTCACGTTTGCATC TERM 3389 4473164 - 4473127 - g 78 -10.5 -3.99678 | gap 1, overlap 4473122 4473128 AGCGCCATAACGAAA GCGCCTCGCTGGCCGACT CCG AGCCGGCCGGCAACGC-C TAAGCCTTGATTGCG secB 4472652 - 4473167 + | preprotein translocase subunit SecB TERM 3390 4473388 - 4473417 + G 78 -12.9 -3.45023 | gap 1 GTGCCACCACCGACC TGCAGGCGGCCGTC GCT GACG-CCGCCTGGA TTCTGGTGGTGGTGC gpsA 4473171 - 4474208 + | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase TERM 3391 4474245 - 4474282 + T 89 -17.1 -3.11634 | gap 1, opp_overlap 4474249, overlap 4474249 CCATTGCGAAGATGC ACAACACCACGCCCCGGC AAT GCTGG-GCGTGGTGTTGA TTGGCTGCTGTGCGG TERM 3392 4474249 - 4474278 + T 88 -16.5 -3.38584 | gap 1, opp_overlap 4474249, overlap 4474245 TGCGAAGATGCACAA CACCACGCCCCGGC AAT GCTGG-GCGTGGTG TTGATTGGCTGCTGT TERM 3393 4474278 - 4474249 - T 83 -15 -3.42503 | opp_overlap 4474249 4474245 TGCGAAGATGCACAA CACCACGCCCCG GCAATG CTGGGCGTGGTG TTGATTGGCTGCTGT TERM 3394 4474484 - 4474459 - T 100 -15.5 -4.65263 | overlap 4474463 ATCGCCCAAAAGAAA GAAACCCGGTC GGTG GACCGGGCTTC CAATGCAACGCTGGA TERM 3395 4474480 - 4474463 - T 100 -12.7 -4.8743 | overlap 4474459 CCCAAAAGAAAGAAA CCCGGTC GGTG GACCGGG CTTCCAATGCAACGC XOO4199 4475127 - 4474531 - | hypothetical protein poxB 4475485 - 4477212 + | pyruvate dehydrogenase TERM 3396 4477687 - 4477670 - g 80 -8.4 -4.33417 | overlap 4477674 GTTAGCGAGAAGAAA GCGACG CAGTAC CGTCGC AACGGTCGCCGCGAG TERM 3397 4478547 - 4478515 - g 71 -14.3 -2.72991 | gap 1, opp_overlap 4478516 4478517 GCAGATCTCCAACCA TGGCGCAGCGATCG CTGAAC CGATCGCTGCG-CA TTTGTTCGAACCGTT TERM 3398 4478516 - 4478547 + G 95 -15.9 -4.15788 | opp_overlap 4478515, overlap 4478517 CAGATCTCCAACCAT GGCGCAGCGATCG CTGAAC CGATCGCTGCGCA TTTGTTCGAACCGTT TERM 3399 4478517 - 4478546 + G 93 -19.4 -3.08991 | opp_overlap 4478515, overlap 4478516 AGATCTCCAACCATG GCGCAGCGATCG CTGAAC CGATCGCTGCGC ATTTGTTCGAACCGT XOO4201 4477262 - 4478704 + | two-component system sensor protein TERM 3400 4479542 - 4479573 + G 81 -13.7 -3.54129 | gap 1 TCGCGGCCACCCATC GCGACCTGGCGGCC TGCGT GGCCGAC-GGTCGC TTTCGCAGCGATCTG ntrC 4478689 - 4480035 + | two-component system regulatory protein XOO4203 4480163 - 4480969 + | hypothetical protein TERM 3401 4481003 - 4481033 + F 100 -22.6 -3.14132 | TGTTCGTTGGGTTCC TCCGCTGGCCACGC CCC GCGTGGCCAGCGGC TTGATCGGCACGGCC TERM 3402 4481036 - 4481052 + F 100 -10.1 -5.03314 | CGTGGCCAGCGGCTT GATCGGC ACG GCCGGTC TTTTTTCGGAGTAAC XOO4204 4481071 - 4481682 + | hypothetical protein XOO4205 4481787 - 4483010 + | MFS transporter XOO4206 4483828 - 4483352 - | tRNA/rRNA methyltransferase XOO4207 4484385 - 4483855 - | hypothetical protein TERM 3403 4484802 - 4484784 - g 79 -10.2 -4.18763 | AACAAAGCGGCAAAA GCGTGCAG GTG CTGCCCGC AGGCCCTGTTCCGGC XOO4208 4484702 - 4485022 + | hypothetical protein fabH 4485124 - 4486140 + | 3-oxoacyl-(acyl carrier protein) synthase III TERM 3404 4486297 - 4486271 - g 77 -15.2 -2.82623 | opp_overlap 4486257, overlap 4486268 GCTCCCTTACAACGA TCTCCCGCTGCT TCC ACCAGCGGGAGA TATCGAAACGCGGAG XOO4210 4486212 - 4487375 + | hypothetical protein TERM 3405 4488036 - 4488025 - gf 74 -2.2 -4.83615 | opp_overlap 4488031 TAGTGCTTATAAAAA TCGC GACA ACGA CCCTCGTGGTGTTTG XOO4211 4487372 - 4489003 + | methyltransferase TERM 3406 4489718 - 4489732 + GF 73 -5.7 -4.36914 | CCTGCTTAAGCGCGG CGTAC GGATG GTACG TTTTATCGCCCGCGA TERM 3407 4491219 - 4491254 + GF 74 -4.7 -4.52703 | gap 1, opp_overlap 4491219, overlap 4491221 4491239 AATCAACCAAAATCA GGCGTCGGTCTCTATC GCTGG GAT-GAGGGCGACGGC TTTTATCCTGATTTC XOO4212 4488924 - 4491506 + | hypothetical protein TERM 3408 4492176 - 4492225 + G 89 -18.6 -3.16564 | overlap 4492209 ACAAGGGCTGGTCGT TGCTGGAGCGCTCGGCGCAGG-CG TTGC CGACCTTCGCCGAGCGC-CCGGCC TTCATCGCCTGGGGG TERM 3409 4492368 - 4492381 + G 71 -4.5 -4.58663 | gap 1, overlap 4492351 ACGAGGTGCTGGTGC CG-GCG ATT CGCGCG TTTTTGGAGCGTCAT dhaA 4491503 - 4492405 + | haloalkane dehalogenase ykgJ 4493082 - 4492627 - | ferredoxin XOO4215 4493329 - 4494999 + | peptide synthase cdh 4495030 - 4496238 + | NAD(P)H steroid dehydrogenase XOO4217 4496303 - 4496461 + | hypothetical protein TERM 3410 4496506 - 4496545 + F 93 -18.6 -3.28924 | opp_overlap 4496513, overlap 4496513 CGCTGCTGGTTGGCG CTCACAAGGCCCGCTTCT GCAA GGACGCGGGCCTTGTGCG TTATGGCGGGAAATA TERM 3411 4496538 - 4496513 - f 72 -11.8 -3.28712 | opp_overlap 4496506 4496513 GGTTGGCGCTCACAA GGCCCGCTTC TGCAAG GACGCGGGCC TTGTGCGTTATGGCG TERM 3412 4496513 - 4496538 + F 76 -12.5 -3.45054 | opp_overlap 4496513, overlap 4496506 GGTTGGCGCTCACAA GGCCCGCTTCT GCAA GGACGCGGGCC TTGTGCGTTATGGCG TERM 3413 4496642 - 4496654 + F 71 -4.8 -4.42238 | TGCGGTTTTGGCGTG CTGG AACTG CCAG TTTTCGTTACGCTAG XOO4218 4496696 - 4498072 + | IS1478 transposase XOO4219 4498622 - 4498083 - | MarR family transcriptional regulator XOO4220 4500379 - 4499045 - | hypothetical protein TERM 3414 4499078 - 4499094 + g 71 -9.4 -3.70902 | TTCGAGATCGCGGAA GCCCCA CTCGC TGGGGC TTTCCATCTGCACAA vanK 4501750 - 4500443 - | MFS transporter XOO4222 4501922 - 4502143 + | transposase XOO4223 4502274 - 4502140 - | transposase TERM 3415 4502271 - 4502255 - G 74 -10.1 -3.70902 | opp_overlap 4502250, overlap 4502256 CGGGTCAGATCGAAA CGGCGGT TGA ACCGCCA CATCGTCTCTGCCAG XOO4224 4503156 - 4502323 - | transposase TERM 3416 4503004 - 4502989 - G 74 -4.6 -4.55697 | ACGCGGACAAACAAA GCCCTG TGGC CAGCGC GAGATCTCCAACGCC XOO4226 4503200 - 4503778 + | transposase XOO4227 4503832 - 4504869 + | putative transposase XOO4228 4505115 - 4505765 + | transferase TERM 3417 4506185 - 4506153 - f 74 -14.2 -2.53876 | gap 1, opp_overlap 4506150, overlap 4506178 GGCCACCGGAACGCA CG-CGCGACGGTTGC AGCA GCAACAGTCGCGACG CGGTCTAATTGCCAG TERM 3418 4507833 - 4507819 - g 74 -12.8 -3.28924 | CACGCCTCCCCAGAA GCCGCC GCA GGCGGC GCGATCGGCCTGGTG ilvD 4506232 - 4508070 + | dihydroxy-acid dehydratase XOO4232 4509176 - 4508301 - | site-specific recombinase TERM 3419 4508519 - 4508549 + gF 77 -5.2 -4.62783 | overlap 4508528 CAAGGCCAGCCTGTT GCCGTGCCGCCTGC ACC GCACGCTGCAGGAC TTTTTCCGATACGTG XOO4233 4509176 - 4509955 + | IS1478 transposase XOO4234 4509995 - 4510636 + | IS1478 transposase hemF 4513553 - 4514452 + | coproporphyrinogen III oxidase TERM 3420 4515148 - 4515118 - Tf 100 -15.4 -5.4433 | AGACACAAATAAAAA GCCCCGCAGACC AGGGGGA GGTCGGCGGGGC CAGGGAGCGGGAACT polA 4518201 - 4515400 - | DNA polymerase I TERM 3421 4516466 - 4516479 + gF 78 -3.8 -4.72272 | TTGAAGGTGCGCCCT GCCA GCTCGG TGGC TTTTTGCTGGGCGGC TERM 3422 4517307 - 4517263 - Gf 83 -15 -3.25823 | gap 2 CGGCCCGGACACGAA GCCGGTGCCGCGCGCAC-G-GC CCG GCTCGGTGCGCGCGGTAGCAGC GGCAGCGCCCAGCGC XOO4241 4518200 - 4518568 + | hypothetical protein XOO4242 4519121 - 4518834 - | hypothetical protein TERM 3423 4518913 - 4518940 + g 100 -8.2 -5.00616 | overlap 4518893 GGCTCAGGTGTGTTT GCCTGGCCGCGC GTTT GAGCGGCCCAGC TTTTTTCCGGCGGGC XOO4243 4520089 - 4519118 - | hypothetical protein XOO4245 4519739 - 4520053 + | hypothetical protein TERM 3424 4520081 - 4520113 + gF 90 -16.4 -3.31792 | opp_overlap 4520070 4520081 ACAACCGCGGACACA GGACAGCACGGC ACGGACGAC GCCGTGCTGTCC TTGTCGGAATGCTCA TERM 3425 4520113 - 4520081 - Gf 90 -17.8 -2.88758 | opp_overlap 4520081, overlap 4520070 ACAACCGCGGACACA GGACAGCACGGCAC GGACG ACGCCGTGCTGTCC TTGTCGGAATGCTCA XOO4246 4520247 - 4521254 + | ISxac1 transposase dgt 4523361 - 4521907 - | deoxyguanosinetriphosphate triphosphohydrolase TERM 3426 4523321 - 4523353 + g 100 -23.7 -3.96624 | opp_overlap 4523321 4523325, overlap 4523325 GTAACCCACACAAAA CAAAGAAGGCGACCT AAA AGGTCGCCTTCTTTG TTTCTCATAACAGTC TERM 3427 4523353 - 4523321 - G 100 -23.7 -4.57474 | opp_overlap 4523321 4523325, overlap 4523325 GTAACCCACACAAAA CAAAGAAGGCGACCT AAA AGGTCGCCTTCTTTG TTTCTCATAACAGTC TERM 3428 4523349 - 4523325 - G 100 -18.7 -4.83243 | opp_overlap 4523321 4523325, overlap 4523321 CCCACACAAAACAAA GAAGGCGACCT AAA AGGTCGCCTTC TTTGTTTCTCATAAC TERM 3429 4523325 - 4523349 + g 100 -18.7 -4.59342 | opp_overlap 4523325 4523321, overlap 4523321 CCCACACAAAACAAA GAAGGCGACCT AAA AGGTCGCCTTC TTTGTTTCTCATAAC TERM 3430 4524384 - 4524403 + r 73 -11.4 -3.56325 | opp_overlap 4524381 4524384 CGCGGTAGTACATCA GCTGGTCG GCGT CGACCGGC TTGTACTTCTGGCCG XOO4251 4527250 - 4526774 - | arabinogalactan endo-1,4-beta-galactosidase TERM 3431 4527561 - 4527536 - R 73 -3.3 -4.7254 | gap 1 AGTGCCTACGAAAAA TCG-TCATGGAA CGC TCCCTTGATCGA TGGAGAAAGCGCCGA TERM 3432 4527583 - 4527570 - R 74 -9.5 -3.92869 | opp_overlap 4527570 4527569 TGATCGATGGAGAAA GCGCC GAGT GGCGC CTTGCTTGATCCCCC TERM 3433 4527612 - 4527638 + r 82 -5.8 -4.90917 | gap 1, overlap 4527610 CCTGCTATTGCATCG TGCGCGCGACG GACTTG CGA-GCGCGCA TTTTTGCTTCGCTTT TERM 3434 4527839 - 4527856 + r 76 -9.1 -4.08064 | gap 1, opp_overlap 4527839 4527831, overlap 4527855 GATTGAACGCAAAAA CGCCAGGG AAG CCC-GGCG TTTTACGACAACGTT TERM 3435 4527856 - 4527839 - R 100 -10.5 -4.75174 | opp_overlap 4527839 4527855, overlap 4527831 GATTGAACGCAAAAA CGCCAGG GAAG CCCGGCG TTTTACGACAACGTT XOO4252 4528357 - 4527965 - | hypothetical protein XOO4253 4529010 - 4528183 - | hypothetical protein XOO4254 4530089 - 4529121 - | putative transposase TERM 3436 4529390 - 4529379 - G 76 -2.2 -4.8622 | overlap 4529380 GGCGGCAATGAAAAA TGCA GCCT CGCA GCTCTGCAACTCGTC avrXa7 4530410 - 4533652 + | avirulence/virulence protein TERM 3437 4533811 - 4533841 + F 93 -7.4 -5.00616 | overlap 4533818 4533821 CGTCCCATCGCGTTG CCGACCTCGCGCAC GTG GTTCGCGTGCTTGG TTTTTTCCAGAGCCA TERM 3438 4533821 - 4533837 + F 76 -10.1 -3.93166 | overlap 4533818 4533811 CGTTGCCGACCTCGC GCACGTG GTT CGCGTGC TTGGTTTTTTCCAGA TERM 3439 4534329 - 4534278 - f 86 -11.7 -4.13945 | gap 3, overlap 4534246 4534241 AGCTGGAGGGTAAAA CGCCCG-CGTACCAGGAT-CGGG-GG CGG CCTCCCGGATCCTGGTACGCCCATCG CTGCCGACCTGGCAG TERM 3440 4534784 - 4534796 + G 74 -4.8 -4.4773 | TGCGGTTTTGGCGTG CTGG AACTG CCAG TTTTCGTTACTCTAC XOO4257 4534754 - 4535533 + | IS1478 transposase XOO4258 4535573 - 4536214 + | IS1478 transposase XOO4259 4536686 - 4536225 - | hypothetical protein TERM 3441 4536395 - 4536411 + g 76 -13.7 -3.14564 | opp_overlap 4536393 GCCGCGGATGACACC GCGCCAG GCC CTGGCGC TTCATCAGACGCTGC XOO4260 4536787 - 4536683 - | hypothetical protein XOO4261 4537184 - 4537062 - | hypothetical protein XOO4262 4537649 - 4537203 - | hypothetical protein TERM 3442 4537324 - 4537336 + g 71 -10.5 -3.57971 | TGGCTGGTTATGCGG CCGGC GGT GCCGG TTTCGGGCTGGATCT icfG 4537768 - 4539774 + | IcfG protein spoIIAA 4540199 - 4540618 + | anti-sigma F factor antagonist TERM 3443 4540651 - 4540676 + T 74 -12.5 -3.34344 | overlap 4540654 CGCACATGTGGGAAT GGGTGCGCGCG GGTA CGCGCGCAATC TTGGTTAGGCGATGA TERM 3444 4540654 - 4540673 + T 74 -15 -2.54098 | overlap 4540651 ACATGTGGGAATGGG TGCGCGCG GGTA CGCGCGCA ATCTTGGTTAGGCGA TERM 3445 4541085 - 4541054 - T 88 -16.6 -3.28712 | opp_overlap 4541061, overlap 4541055 4541057 4541061 GCCGCCCCCTCACAA CGACAAAGGCCCGC CGAA GCGGGCCTTTGCCT GGACAGCAGCCAGAC TERM 3446 4541084 - 4541055 - T 90 -20.1 -2.57132 | opp_overlap 4541061, overlap 4541054 4541057 4541061 CCGCCCCCTCACAAC GACAAAGGCCCGC CGAA GCGGGCCTTTGCC TGGACAGCAGCCAGA TERM 3447 4541082 - 4541057 - T 87 -19.1 -2.82623 | opp_overlap 4541061, overlap 4541055 4541054 4541061 GCCCCCTCACAACGA CAAAGGCCCGC CGAA GCGGGCCTTTG CCTGGACAGCAGCCA TERM 3448 4541078 - 4541061 - T 90 -14.1 -4.1021 | opp_overlap 4541061, overlap 4541057 4541055 4541054 CCTCACAACGACAAA GGCCCGC CGAA GCGGGCC TTTGCCTGGACAGCA TERM 3449 4541061 - 4541078 + T 81 -14.1 -3.64703 | opp_overlap 4541061 4541057 4541055 4541054 CCTCACAACGACAAA GGCCCGC CGAA GCGGGCC TTTGCCTGGACAGCA XOO4266 4541838 - 4541104 - | hypothetical protein TERM 3450 4541239 - 4541269 + g 71 -9.7 -3.7282 | gap 1 GCTGCGCTTGATGGT GGTGCTGGC-GTCG AAAC CAGCAGCCAGCACC TTCTTCATCGGGTGC XOO4267 4542639 - 4542049 - | hypothetical protein TERM 3451 4542886 - 4542937 + G 72 -11.6 -3.53761 | gap 4, overlap 4542886 CCACCTGCAGCCCAA GG-C-GCCGTGGCGCTGGGCGG-CGC CGCG GCGGCTGCCCGGCGCC-CGACAGGCC TTTGGCGCGCCATTC TERM 3452 4543593 - 4543623 + G 70 -14.1 -2.64735 | gap 1, overlap 4543619 GCGTTGACACCTATC TGCAGGCGTT-GCG ACAA CGCCAGCGCCTGCA TCCTGTCGATGAAGT XOO4268 4542773 - 4543720 + | hypothetical protein XOO4269 4543717 - 4544619 + | hypothetical protein TERM 3453 4545107 - 4545081 - g 81 -13.7 -3.51924 | TTCGTACCGACAGAA GCGGCTGCCGC ATACA GCAGCAGCCAC ACGTGGTGACACGCA XOO4270 4544616 - 4545116 + | hypothetical protein TERM 3454 4545164 - 4545222 + T 78 -15.3 -2.76737 | gap 1, opp_overlap 4545214, overlap 4545165 4545166 ATCCGGTCGACCACG GC-GTGATCGTCGTGGCATCGGCGTCGT TGCC ACGACGCCGATGCCACCAACCGCACTGC GTTTACGGGTTGCTG TERM 3455 4545165 - 4545223 + T 73 -11.2 -3.61764 | gap 3, opp_overlap 4545214, overlap 4545164 4545166 TCCGGTCGACCACGG CGTGAT-CG--TCGTGGCATCGGCGTCGT TGCC ACGACGCCGATGCCACCAACCGCACTGCG TTTACGGGTTGCTGG TERM 3456 4545166 - 4545219 + T 80 -16.7 -2.65279 | opp_overlap 4545214, overlap 4545164 4545165 CCGGTCGACCACGGC GTGATCGTCGTGGCATCGGCGTCGT TGCC ACGACGCCGATGCCACCAACCGCAC TGCGTTTACGGGTTG XOO4271 4546148 - 4545225 - | proteinase XOO4272 4547246 - 4546545 - | proteinase TERM 3457 4547306 - 4547270 - H 74 -5.7 -4.49958 | opp_overlap 4547303, overlap 4547271 4547303 AGGGGAGTAAAGAAA TCAGCGCGCTGGCGGTG CGA CACCATCACCACACTGC ATCTTCGGCAGCTTT XOO4273 4548072 - 4548764 + | hypothetical protein glnE 4551685 - 4548860 - | glutamine synthetase adenylyltransferase TERM 3458 4550575 - 4550591 + g 80 -5.1 -4.72497 | GAAACCGATACGCCG TGGTCAG CGC TTGGCCA TTTTCTTGATCGATC TERM 3459 4550658 - 4550624 - G 78 -14.3 -3.18383 | gap 1, overlap 4550645 4550646 ACCTGCAGTCACCAA TGCGCGCAGCGCGGGC AACA ACCGGCGCT-CGCGCA GACTCGGCTCGCGCC TERM 3460 4551610 - 4551576 - G 75 -7.8 -4.25283 | overlap 4551577 AGCTGTCGATCAAAA TCGCCGCCTGGCCA CACCTGC CAGGCAGGCAGCGA TTGACGGACACGCGC XOO4275 4551847 - 4552365 + | hypothetical protein gnl 4552362 - 4553285 + | gluconolactonase precursor TERM 3461 4553415 - 4553388 - T 100 -17 -5.4833 | opp_overlap 4553388 TCAGGCAATAAAAAA GCCCGCTTGCAG CGAA CTGCCAGCGGGC TTTGCTCCCTCCCCC TERM 3462 4553388 - 4553415 + T 100 -17 -3.76224 | opp_overlap 4553388 TCAGGCAATAAAAAA GCCCGCTTGCAG CGAA CTGCCAGCGGGC TTTGCTCCCTCCCCC XOO4277 4554337 - 4553714 - | hypothetical protein XOO4278 4554538 - 4554347 - | hypothetical protein YXOOp16 4554494 - 4554598 + | hypothetical protein XOO4279 4555255 - 4554635 - | hypothetical protein TERM 3463 4554661 - 4554711 + g 100 -8.9 -5.055 | gap 2, overlap 4554664 4554696 TCGCTGTGGGCGTCG CGTTCGTTGCAGTCGTTGCGCGCGG ATG CTGCGCG-GGCGGCTGCGTCGC-CG TTTTTTCGACATTGC TERM 3464 4554843 - 4554796 - G 72 -13.5 -3.16564 | gap 2, opp_overlap 4554808 CCTTCACCGGAGCAA CCGCAGC-ACGC-CTCGCTTGCG TCGC CGCAGGCGATTGCGTCGCTGCGA CGACCGCGGCCCGCA TERM 3465 4555280 - 4555236 - G 85 -12.2 -4.08216 | gap 2, opp_overlap 4555273 GCAGGCTCCTGAAAA CCGCGCAC-GC-GGCTCGGCAC AGT GTGCCAAGCCCACCGTGAGCAG GACGCAGTACGATCA XOO4280 4556110 - 4555310 - | hypothetical protein TERM 3466 4556306 - 4556321 + G 74 -4.6 -4.55697 | GGCGTTGGAGATCTC GCGCTG GCCA CAGGGC TTTGTTTGTCCGCGT TERM 3467 4556685 - 4556701 + G 74 -10.1 -3.70902 | opp_overlap 4556680, overlap 4556686 CTGGCAGAGACGATG TGGCGGT TCA ACCGCCG TTTCGATCTGACCCG XOO4281 4556154 - 4556762 + | transposase XOO4282 4557881 - 4556817 - | hypothetical protein TERM 3468 4558564 - 4558594 + r 95 -21.2 -3.16564 | CGGTGGTGTCCAATC CGTCGGGCCGGC TGCCTGC GCCGGCCCGACG TTCCTGGCCTGCAGC aroG 4559859 - 4558786 - | phospho-2-dehydro-3-deoxyheptonate aldolase TERM 3469 4559187 - 4559207 + g 79 -14.7 -2.93435 | opp_overlap 4559169, overlap 4559203 GGCAATCCGGATTGC CTGCCGTGG CTG CCACGGCGG TATGTCCGTCCTTGG TERM 3470 4559939 - 4559918 - R 100 -13 -5.4505 | opp_overlap 4559918, overlap 4559903 GGCGGCAACAAAAAA GCCGCCAG TGTGCG CTGGCGGC TTTTTGGGAATGCTG TERM 3471 4559918 - 4559939 + r 100 -13.7 -4.60487 | opp_overlap 4559903 4559918 GGCGGCAACAAAAAA GCCGCCAGT GTGC GCTGGCGGC TTTTTGGGAATGCTG TERM 3472 4560581 - 4560540 - R 95 -20.9 -3.19255 | GCAACACACACGTAA GGCACCCGCACGCCACGGC ACCA ACCGTGACGTGCGGATGCG CTGCAATCACTGCGA XOO4285 4562495 - 4560897 - | hypothetical protein TERM 3473 4561126 - 4561167 + g 72 -7.1 -4.29738 | gap 1, opp_overlap 4561127, overlap 4561127 CCGTTGTCCCAATGC ACGCTGCCACGCACGCG-GC TGC GCACGCGTTCGTCGCGACGG TTTTCGTCGCTGTCG XOO4286 4563593 - 4562619 - | hypothetical protein TERM 3474 4562774 - 4562818 + g 85 -16.5 -3.06492 | opp_overlap 4562766, overlap 4562779 CGATGAACTCGCTGC CCAAGCGCGCG-CAGGTGCCG GCCGG CGGCGCCAGGCGCGCG-TTGG TATTGGCATCGATCA TERM 3475 4562779 - 4562814 + g 88 -16.1 -3.37245 | gap 1, opp_overlap 4562766, overlap 4562774 AACTCGCTGCCCAAG CGCGCG-CAGGTGCCG GCCGG CGGCGCCAGGCGCGCG TTGGTATTGGCATCG TERM 3476 4563699 - 4563689 - H 78 -6.8 -4.63486 | ACGTGCCCAACAAAA CTGC TAT GCAG CGACAGCGCTGTGAA TERM 3477 4565208 - 4565246 + G 80 -16.7 -2.52464 | gap 1, opp_overlap 4565216 CGTCTGAGCACTGTG CTACAGCACGGCCCGGGC CCGG GCCCGGGCCGGTCTG-AG TCGATTCCACGGCAG TERM 3478 4565239 - 4565216 - g 100 -21 -2.62396 | opp_overlap 4565208 CACTGTGCTACAGCA CGGCCCGGGC CCGG GCCCGGGCCG GTCTGAGTCGATTCC XOO4287 4563900 - 4566008 + | hypothetical protein TERM 3479 4566052 - 4566069 + T 86 -14.1 -3.93288 | CGCCGATGATCCAGG CCCCGCC TCGC GGCGGGG TTTGCTTGGATCCAG TERM 3480 4566235 - 4566281 + T 100 -23.3 -3.0634 | gap 1, opp_overlap 4566246, overlap 4566246 CGCTGCGCAGCCCCA CCGCA-TAAAAAGAGCCCCGCA TCGC TGCGGGGCTCTTTTGACTGCGG TGTTGCGGTCGGCTT TERM 3481 4566269 - 4566246 - T 100 -18.2 -4.85599 | opp_overlap 4566235 4566246 CCCACCGCATAAAAA GAGCCCCGCA TCGC TGCGGGGCTC TTTTGACTGCGGTGT TERM 3482 4566246 - 4566269 + T 100 -18.2 -4.19258 | opp_overlap 4566246, overlap 4566235 CCCACCGCATAAAAA GAGCCCCGCA TCGC TGCGGGGCTC TTTTGACTGCGGTGT groEL 4567949 - 4566309 - | chaperonin GroEL TERM 3483 4566944 - 4566963 + g 78 -2.8 -4.86731 | gap 1 CGGCCGAATCGCCAG CGCCGTCGA TGA TCG-TGGTG TTTTCTTTGGAAACC TERM 3484 4567670 - 4567698 + g 74 -10.9 -3.56558 | overlap 4567670 4567693 GGGCCTGCGCCAGCA CGGTGGCGGTGGT GGT GCCGTCGCCAGCG TTATCGTTGGTCTTG groES 4568373 - 4568086 - | co-chaperonin GroES TERM 3485 4568481 - 4568468 - R 83 -5.2 -5.00884 | AGCGCGCGGAAAAAA CCCG ACGAAG CGGG TGCAGGCAAGAGATT XOO4290 4569094 - 4568771 - | ISxac1 transposase XOO4291 4569339 - 4569076 - | ISxac1 transposase XOO4292 4570246 - 4569422 - | hypothetical protein XOO4293 4570560 - 4570243 - | hypothetical protein TERM 3486 4571953 - 4571906 - g 80 -15.4 -2.90901 | overlap 4571892 AGATGGGCAAGCACA TCGCCAAGGCGATCCGGGCGCG GCAT CGCGGCCAGACCGCGCCGGCGT TCCGCTACCAGGACT ndh 4570798 - 4572210 + | NADH dehydrogenase XOO4295 4572260 - 4572499 + | hypothetical protein TERM 3487 4572902 - 4572921 + T 95 -16.4 -3.85698 | opp_overlap 4572902 CACCACATCTGCAAA CGGCCCGG AAAA CCGGGCCG TTTGTACAACAGCGA TERM 3488 4572921 - 4572902 - T 91 -16.4 -3.59738 | opp_overlap 4572902 CACCACATCTGCAAA CGGCCCGG AAAA CCGGGCCG TTTGTACAACAGCGA rpoH 4573943 - 4572954 - | RNA polymerase factor sigma-32 ung 4574753 - 4574028 - | uracil-DNA glycosylase TERM 3489 4574516 - 4574506 - G 72 -3.2 -4.68593 | overlap 4574510 GGCAGCACCGAAAAA CACA GCC CGTG CGCCTGGCCTTCGCC XOO4298 4575664 - 4574750 - | response regulator protein ftsX 4576551 - 4575601 - | cell division protein TERM 3490 4575651 - 4575635 - G 75 -10.1 -3.90112 | GTCTGGCGAAGGAAA TGGCCGG TCA CCAGCCA GGCGCCCAACCATCC TERM 3491 4575878 - 4575853 - GR 79 -2.4 -5.03994 | overlap 4575855 4575868 4575872 GCCCAGATACAAAAA CGGGCGACGG ATGAAG CCATCGCTGG CACCGAGCAACTGCA ftsE 4577297 - 4576548 - | ABC transporter ATP-binding protein rhlB 4579034 - 4577310 - | ATP-dependent RNA helicase RhlB TERM 3492 4579186 - 4579209 + H 100 -13.8 -4.54727 | opp_overlap 4579185 TTTAACGCAATGTAG CGGCCTGCCC GTTC GGGTGGGCCG TTTTGGTTTCCAGGA trxA 4579233 - 4579574 + | thioredoxin TERM 3493 4579603 - 4579580 - f 72 -13.8 -2.78384 | opp_overlap 4579571 4579567, overlap 4579552 CGCCGCCTGAGCAGA CGGGCGTCCA GCGA TGGGCGCCCG ATGATGCGCCGTCAG rho 4580400 - 4581680 + | transcription termination factor Rho TERM 3494 4581726 - 4581710 - T 78 -3.5 -5.00138 | opp_overlap 4581684 4581711, overlap 4581711 TATCGAAACGAAAAA GCCCCGC GTT GCTGGGT TTTTTATGGATGGAC TERM 3495 4581711 - 4581725 + T 91 -7 -5.28176 | opp_overlap 4581711 4581710, overlap 4581684 ATCGAAACGAAAAAG CCCCGC GTT GCTGGG TTTTTTATGGATGGA XOO4304 4582889 - 4581903 - | IS1404 transposase TERM 3496 4581956 - 4581973 + g 78 -4 -4.79949 | overlap 4581951 4581957 GCTGGGCATAGGCCG CCGGCG TCATTC CGCCGA TTGTTTTTTTGGGGC TERM 3497 4584638 - 4584650 + G 73 -9.1 -3.86897 | CGGCCAGGTGTATGG CCAGC TGC GCTGG TTTCTGGGCGCTGGC XOO4305 4583262 - 4585079 + | hypothetical protein XOO4306 4585076 - 4588210 + | hypothetical protein XOO4307 4588189 - 4588932 + | putative periplasmic protein XOO4309 4589270 - 4589067 - | putative transposase TERM 3498 4590169 - 4590200 + r 100 -11.4 -4.69053 | GCCGATTACGAGCAC CGGCCGCGCCCGCC TGGC GGTGAGCGCAGTCG TTTTGTTCGCTGCTC XOO4312 4590717 - 4590268 - | hypothetical protein TERM 3499 4590629 - 4590574 - G 72 -13.3 -3.17075 | CCCGTTGGAACGTAA CGGATGCGCATCGCTGCGATGC-GCGT GACT ACGCAGCA-CGATGCGCTGCGCATCCC ACTCGATCACGTCTT TERM 3500 4591339 - 4591308 - R 73 -13 -3.12942 | gap 1, opp_overlap 4591307, overlap 4591305 4591306 4591301 CCCAGCAACAAACCA CCGACCGAGGTCGCC AGC GGCGAGC-CGGTCAG ATCCTTCGGCAGCAG XOO4316 4594746 - 4593772 - | acyltransferase TERM 3501 4594169 - 4594194 + g 73 -12.5 -3.40073 | CGATCGATCAGCAGC GCCACCAGCGC ACCG GCGTCGGTGGC TTCCTTGATCGCCAT XOO4317 4595030 - 4594743 - | putative dehydratase XOO4319 4596591 - 4595845 - | ketosynthase XOO4320 4596835 - 4596566 - | acyl carrier protein TERM 3502 4598046 - 4598058 + G 70 -5.5 -4.2558 | CGATGCCTACACCTT CGTCG ACC CGATG TTTTCCTCCGGCGTG TERM 3503 4598274 - 4598262 - g 71 -7.7 -4.11216 | CGCGCAGCCGCAAAA CACCT GGC AGGTG GAACAGGCGGTGGTG XOO4321 4597102 - 4598487 + | hydroxylase TERM 3504 4599143 - 4599183 + G 78 -14 -3.21276 | gap 1, overlap 4599142 4599145 GCCGCCGAGTTTCGC GC-GCGCCATGTTGCCGCC GGCC GGCAGCGACATGCCGCTGC TGTTGTCAGGCACCG TERM 3505 4599145 - 4599180 + G 80 -15.4 -2.80074 | overlap 4599143 4599142 CGCCGAGTTTCGCGC GCGCCATGTTGCCGCC GGCC GGCAGCGACATGCCGC TGCTGTTGTCAGGCA rapK 4598598 - 4599491 + | pteridine-dependent deoxygenase like protein XOO4323 4600699 - 4599737 - | 5'-nucleotidase, putative TERM 3506 4600817 - 4600801 - R 74 -5.1 -4.57569 | TGAGCGGCCGAAAAA GGTTGGA TGG TGCAACC ATGCTCCCCAGCACT XOO4324 4602654 - 4601149 - | AMP-ligase TERM 3507 4601495 - 4601480 - G 72 -8.2 -4.13767 | overlap 4601481 CCGCGTACCTGAAAA CGGCCG TCGT CGGCCA CGTCCATCATGTCGG TERM 3508 4603003 - 4603013 + H 84 -4 -5.1287 | CCAGCCCAGTAGCGT TGAA GAA TTCA TTTTTTCGCTGTCGC XOO4325 4603163 - 4605601 + | dipeptidyl peptidase TERM 3509 4605647 - 4605674 + F 84 -17 -2.70932 | opp_overlap 4605644 4605641 4605640, overlap 4605649 GATGCAAAGGGACGA CGCGCGCAGCGC CCGG GCGTTGCGCGTG TCCTTAGAGCGGCGA TERM 3510 4605649 - 4605672 + F 83 -16 -2.90075 | opp_overlap 4605644 4605641 4605640, overlap 4605647 TGCAAAGGGACGACG CGCGCAGCGC CCGG GCGTTGCGCG TGTCCTTAGAGCGGC TERM 3511 4605776 - 4605809 + F 93 -13.7 -4.22375 | TGCCGATTCCGAGCA CCGGCCGCGCCCGCC TGGC GGTGAGCGCAGTCGG TTTGTTAGCTGCTCT XOO4326 4606046 - 4606765 + | hypothetical protein XOO4327 4606762 - 4607355 + | hypothetical protein TERM 3512 4608297 - 4608309 + T 71 -6.2 -4.30978 | opp_overlap 4608296 4608297, overlap 4608279 GCAGGTCGTCGAAAC GCCC AAGCC GGGC TTTTACTGCCTTGGC XOO4328 4608880 - 4608449 - | hypothetical protein XOO4329 4609016 - 4609894 + | oxidoreductase TERM 3513 4609993 - 4609960 - f 72 -11.7 -3.28712 | opp_overlap 4609961, overlap 4609961 GCTCGTCGTTGAGAA GGTTTGCCGTGACCG TTTG CGATCACGGCGAACT TGATCGTGCGCCACC TERM 3514 4609961 - 4609992 + F 83 -15.2 -3.21099 | opp_overlap 4609960 4609961 CTCGTCGTTGAGAAG GTTTGCCGTGACCG TTTG CGATCACGGCGAAC TTGATCGTGCGCCAC TERM 3515 4609992 - 4609961 - f 77 -15.2 -2.57132 | opp_overlap 4609961, overlap 4609960 CTCGTCGTTGAGAAG GTTTGCCGTGACCG TTTG CGATCACGGCGAAC TTGATCGTGCGCCAC TERM 3516 4610917 - 4610881 - f 83 -9.4 -4.26076 | gap 2, overlap 4610851 4610882 GCAGGTGGACGAAAA CGGCAAGCTGCCGGCATC GGC GATGCCGGCCGC--GCCT GCACGACCGCTGCCG TERM 3517 4610916 - 4610882 - f 73 -12.9 -3.15324 | gap 2, overlap 4610851 4610881 CAGGTGGACGAAAAC GGCAAGCTGCCGGCATC GGC GATGCCGGCCGC--GCC TGCACGACCGCTGCC TERM 3518 4612183 - 4612214 + F 91 -16.6 -3.59979 | opp_overlap 4612184, overlap 4612184 GAGCAACGTGAGTAA ACGCCGGTGATGGC TGCT GCCATCACTGGCGC TTTCGCATGCGGCCG TERM 3519 4612184 - 4612213 + F 90 -20.1 -2.75844 | opp_overlap 4612184, overlap 4612183 AGCAACGTGAGTAAA CGCCGGTGATGGC TGCT GCCATCACTGGCG CTTTCGCATGCGGCC TERM 3520 4612213 - 4612184 - f 100 -17.9 -3.76759 | opp_overlap 4612184 4612183 AGCAACGTGAGTAAA CGCCGGTGATGGC TGCT GCCATCACTGGCG CTTTCGCATGCGGCC TERM 3521 4613079 - 4613130 + G 77 -12.8 -3.34013 | gap 1 CGGCGGCGACGGCAC CGCCGGAGTCGCCGCCTCGAGCACC GCG GGTGC-CGCAGTGGCTACCCCAGCG TTGATTGCCGGCATG TERM 3522 4613165 - 4613215 + G 76 -13.8 -3.15574 | overlap 4613163 4613205 CGCAGTTCGCACCGG CCGCGCCGGCGGCCACTGCGCTGG TGG CCAGTGCGGTGATCGTCACCTCGG TGTTGGTGCCGTTGC kdgT 4612318 - 4613274 + | 2-keto-3-deoxygluconate permease metE 4614509 - 4613481 - | 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase XOO4334 4615703 - 4614537 - | hypothetical protein TERM 3523 4614844 - 4614834 - GR 86 -8.2 -4.56133 | overlap 4614836 GCCGAAGAAGTAAAA CGCC AAG GGCG CAACGCTGTTGGGCG sflA 4616265 - 4615663 - | NADH-dependent FMN reductase TERM 3524 4616573 - 4616563 - g 84 -6.8 -4.79223 | CCACAGCATGAAAAA GCTG GAA CAGC AGCTGGGCACCGACA metR 4616519 - 4617361 + | MetE/MetH family transcriptional regulator XOO4337 4617361 - 4618026 + | hypothetical protein metF 4618245 - 4619180 + | 5,10-methylenetetrahydrofolate reductase TERM 3525 4619221 - 4619235 + F 71 -8.5 -3.86015 | opp_overlap 4619221 CTGGAGCACAACGAA CGCGC ACTGG GCGCG TTTATGGCAGACATC smeR 4619834 - 4620577 + | two-component system regulatory protein purU 4621525 - 4620656 - | formyltetrahydrofolate deformylase XOO4344 4622229 - 4621687 - | hypothetical protein XOO4345 4623348 - 4622470 - | dehydrogenase TERM 3526 4622770 - 4622752 - G 75 -10.2 -3.88291 | opp_overlap 4622744 CAGCATGCCCAGAAA CTGCGTGG TAT CCACGCCG TGACCACGTGCCAGT frp 4624504 - 4623386 - | FMN oxidoreductase TERM 3527 4623795 - 4623807 + g 85 -4.7 -5.0133 | overlap 4623796 GTGGCCGAGATGCGC ACGCC AAT GGCGA TTTTTTCGGAGACTG TERM 3528 4624604 - 4624573 - R 72 -11.6 -3.35679 | gap 1 CTGCGTCATGCAGAA CGCGCAC-TGGCGTC ATT GACGCGACGTGCACG CAGCAGGTCCGTCGA XOO4347 4625444 - 4624563 - | NAD-dependent deacetylase TERM 3529 4625581 - 4625543 - H 88 -17.4 -3.01712 | GGCGCGCGCGCAATA GCACAGCATCACACCGCC GTC GGCGGAGTGACGATGCGC ACGTGACGCGCAACG XOO4348 4625876 - 4626082 + | MerR family transcriptional regulator ynfM 4627735 - 4626338 - | MFS transporter TERM 3530 4626730 - 4626701 - Gf 73 -12.1 -3.37796 | gap 1 GCCGAGCACGCACAA CACGATGCCGGCGG TGA CCACCGGC-CCGCG CCCGAACCGGTCCGA TERM 3531 4628518 - 4628550 + GH 74 -14.8 -2.52464 | gap 1, opp_overlap 4628507 CGAAGGCCATATGCC GCTGGCGCGCCTGGC CCTG GCC-GTCGCGCCGGC TGCATTGGAGACCAC XOO4350 4627721 - 4628608 + | LysR family transcriptional regulator XOO4351 4629060 - 4629413 + | hypothetical protein mttC 4630488 - 4629478 - | type V secretory pathway protein TERM 3532 4629559 - 4629520 - G 84 -13.7 -3.68222 | opp_overlap 4629505 4629517 4629521 4629542 4629543 CGGCAAGCGGAAGAA GGCACGTG-CCGCTGCC GTGCTGTT GGCAGCGGTCACG-GCC ACATCTTCGCCACGA gvpU 4630664 - 4631170 + | gas vesicle protein TERM 3533 4631201 - 4631185 - T 78 -6.5 -4.63928 | overlap 4631188 AGAGCAGCTGAAAAA TGACTGC GCA GCCGTCA GGCGGGCGCGGCCGG TERM 3534 4631373 - 4631391 + T 95 -10.2 -4.62069 | overlap 4631367 ATCGTTGGCGTGCTG CGCGTCGC GCG GCGGTGCG TTTTTGACGTAACGG XOO4355 4633856 - 4631349 - | hypothetical protein TERM 3535 4632708 - 4632731 + g 74 -11.6 -3.57144 | overlap 4632713 GCCTGCATACCGCTG CTGCACGCGC GCAA GCGCGCGCGG TTTGGCGGTGAACGG TERM 3536 4632713 - 4632730 + g 71 -14.1 -2.74144 | overlap 4632708 CATACCGCTGCTGCA CGCGCGC AAGC GCGCGCG GTTTGGCGGTGAACG XOO4356 4634282 - 4633968 - | alpha/beta superfamily hydrolase/acyltransferase XOO4357 4635375 - 4634359 - | transposase TERM 3537 4634490 - 4634474 - G 74 -10.1 -3.70902 | opp_overlap 4634469, overlap 4634475 CGGGTCAGATCGAAA CGGCGGT TGA ACCGCCA CATCGTCTCTGCCAG TERM 3538 4635223 - 4635208 - G 74 -4.6 -4.55697 | ACGCGGACAAACAAA GCCCTG TGGC CAGCGC GAGATCTCCAACGCC XOO4358 4635425 - 4635850 + | LysR family transcriptional regulator TERM 3539 4636816 - 4636786 - g 71 -11.9 -3.2794 | gap 1 GTGGAGCTACACCAA GCGCA-CGGGCG TAGCGCGC CGCCCGCTGCGC AGTGGCGAGAAGCTG XOO4359 4635902 - 4636933 + | putative transposase TERM 3540 4637591 - 4637630 + F 90 -17.9 -2.87211 | gap 1, opp_overlap 4637576 CCTGGACATCGCCCA CGTGCAGCACGCCGCCCG CGCGC CGGGCAGCGTGCTG-GCG TATCTGGAAACGCAT XOO4362 4638294 - 4639550 + | serine-pyruvate aminotransferase TERM 3541 4639678 - 4639696 + G 78 -4.4 -4.83615 | CTGCGTGCTCAATGG CGATGCCG GCT CCGCAGCG TTTTTATCCGAAATG XOO4363 4639547 - 4640437 + | hypothetical protein TERM 3542 4641529 - 4641516 - T 71 -5.9 -4.2828 | GGTGATCGACGAAAA CCCGG CCGA CCAGG AAGGCCCTTGGGTGA XOO4366 4643162 - 4642173 - | putative ISXo8 transposase XOO4367 4644841 - 4643756 - | ISxac1 transposase TERM 3543 4644506 - 4644534 + g 100 -21.1 -3.64703 | opp_overlap 4644499 4644498, overlap 4644530 CAAGTAAGCCCATCT GCGCGTCCTTGCT GCT AGCGAGGACGCGC TTTGCGTGGCCGGGC TERM 3544 4644845 - 4644869 + r 91 -3.4 -5.40474 | overlap 4644843 4644848 4644849 ACTGCTGGGCATAGG CCGCCGGCGT CATTC ACGCCGATTG TTTTTTTGGGGCGGT XOO4368 4645341 - 4644820 - | IS1404 transposase TERM 3545 4644848 - 4644866 + g 82 -5.9 -4.79949 | overlap 4644843 4644845 4644849 GCTGGGCATAGGCCG CCGGCGT CATTC ACGCCGA TTGTTTTTTTGGGGC TERM 3546 4645636 - 4645649 + r 74 -2.3 -4.85782 | overlap 4645637 CAGCGTACGACGCGC CGGTG CGCT CACCA TTTGTTTTTGCAGCG XOO4371 4645912 - 4645808 - | IS1404 transposase XOO4372 4646043 - 4646156 + | putative transposase XOO4373 4646992 - 4646297 - | hypothetical protein tnpA 4646987 - 4647436 + | transposase XOO4375 4647467 - 4648009 + | IS30 family transposase TERM 3547 4648083 - 4648108 + T 78 -6.9 -4.65838 | gap 1 ATCTTCCAGATCTCG CGGCG-CATG ATCAATG CATGTCGCCG TTTTTCAAGTGTGTG TERM 3548 4648283 - 4648250 - T 100 -21.9 -3.49777 | gap 1, opp_overlap 4648270, overlap 4648251 GCGTACACATCACAA GCGGCATGACTCGCCG TAA CGGCGAGTCATGCC-C GGCATGGGTCGCCTA TERM 3549 4648283 - 4648251 - T 100 -22.1 -2.69545 | opp_overlap 4648270, overlap 4648250 CGTACACATCACAAG CGGCATGACTCGCCG TAA CGGCGAGTCATGCCC GGCATGGGTCGCCTA XOO4376 4650380 - 4648296 - | dipeptidyl anminopeptidase accC 4652507 - 4650480 - | biotin carboxylase TERM 3550 4651639 - 4651621 - G 75 -6.6 -4.36903 | opp_overlap 4651621 TCCATGAAATAGAAA TCGCCGTC CGG GCCAGCGA TGAATTCCACCGTGC TERM 3551 4651713 - 4651745 + g 87 -14.8 -3.6279 | gap 1, overlap 4651730 CTTGCCCATCGCCGC GCGCC-GCGCCTCGC TCAT GCCGGGCGCAGGCGC TTCTTCCAGCACTTT accD 4654360 - 4652750 - | acyl-CoA carboxyltransferase beta chain TERM 3552 4653653 - 4653667 + g 77 -11.4 -3.80733 | opp_overlap 4653624 4653620 4653641 AATGCGCGTATGCAC CTCGGC GCC GCCGAG TTCTTCTGCGCTGAC acdA 4655534 - 4654371 - | acyl-CoA dehydrogenase TERM 3553 4654508 - 4654541 + g 86 -9.6 -4.57073 | gap 1, overlap 4654511 AGCCGTTGCCGCCGA GC-ACCTGGATCGCC TGGCC GGTGAGCCAGGTCGC TTTTTCGGCGGCATA TERM 3554 4654905 - 4654956 + g 72 -7.2 -4.21194 | gap 1 GCAAGTGTTAGAGCC GCGCATGCCCAGCTTGTCCAGCTTC TGT GCGG-TGGAAAAGCCCGGCATGCCC TTTTCGATGATGAAG TERM 3555 4655085 - 4655106 + g 72 -12.9 -3.14132 | GAGCACGTAGCGGTC GCCGCGCGC ATCG GCGCGCAGC TTCATCGACACCACG TERM 3556 4655648 - 4655636 - H 71 -4.9 -4.48175 | AAAAGTGAACTAAAA TTCAA CTA TTGAA CCCAGAATCACACCA XOO4380 4655774 - 4656283 + | AcrR family transcriptional regulator XOO4382 4657180 - 4656845 - | hypothetical protein XOO4383 4657488 - 4657177 - | hypothetical protein XOO4384 4658311 - 4657547 - | hypothetical protein TERM 3557 4658445 - 4658416 - R 74 -9.9 -3.7941 | gap 1, opp_overlap 4658412 4658417, overlap 4658417 CAGCCGGTAGAAGAA TTCGCCGCCCAGCG TGT CGC-GTGCGGCGAT GTCCTTGCTGGTGGC TERM 3558 4658444 - 4658417 - R 74 -13.4 -2.87325 | gap 1, opp_overlap 4658412 4658417, overlap 4658416 AGCCGGTAGAAGAAT TCGCCGCCCAGCG TGT CGC-GTGCGGCGA TGTCCTTGCTGGTGG TERM 3559 4658417 - 4658444 + r 74 -13.4 -2.94695 | gap 1, opp_overlap 4658417 4658416, overlap 4658412 AGCCGGTAGAAGAAT TCGCCGCCCAGCG TGT CGC-GTGCGGCGA TGTCCTTGCTGGTGG XOO4385 4659119 - 4658805 - | hypothetical protein TERM 3560 4659016 - 4658987 - GR 85 -16.5 -3.01712 | GTGGCGTCGGCAATA CCAGCGCCAGCAA CGGA TTGGTGGCGCTGG CGAGCGCATGGCCGC XOO4386 4660035 - 4658965 - | hypothetical protein XOO4387 4660151 - 4660753 + | cytochrome C5 TERM 3561 4660973 - 4660991 + G 88 -13.8 -3.87149 | CTTTCGGTTACCACG CGCCGCCT TTC GGGCGGCG TTTGCGTTTGATCCA TERM 3562 4661664 - 4661621 - g 70 -10.9 -3.31263 | gap 1, opp_overlap 4661625 4661627 AGTGGAGGCCGATAA TGCGCGCCGTCGCGTGCTGC TGGAC GATGCGCGCAACGGC-CGCA GCCCCAAGACGGTGT XOO4388 4660830 - 4662743 + | nuclease XOO4389 4663220 - 4662834 - | hypothetical protein XOO4390 4663282 - 4664607 + | nitrile hydratase activator TERM 3563 4664701 - 4664715 + T 76 -6.4 -4.50058 | GTGCAGTGCCACTGC TCCTGG CCG TCAGGA TTTTCATTATCGGTA XOO4391 4666035 - 4664722 - | hypothetical protein TERM 3564 4665437 - 4665454 + g 75 -3.3 -4.78753 | TCCGGCGCCTGCTGT CGCCAGT GACT GCTGCCG TTTTGTTCGTATTCG XOO4392 4666859 - 4666134 - | integral membrane protein XOO4393 4666866 - 4667738 + | hypothetical protein TERM 3565 4667755 - 4667775 + F 78 -14.7 -3.02511 | CGCGGCACGGCCCAT GCGCGTCGC CCT GCGATGCGC TGTTGAGCGGGTCAG TERM 3566 4667998 - 4667988 - g 79 -2.4 -5.00616 | GCGTTCTGGAAAAAA CCCG AAC CGGT ACGTGGCCTGTATGT XOO4394 4667778 - 4668911 + | ATPase TERM 3567 4670353 - 4670377 + F 71 -5.6 -4.38712 | TTCGTTGGCGGTTAT CGTTGCGGGA CTTGC TCTCGCCGCG TTTTCTGCAAGTCGC XOO4396 4670416 - 4673175 + | TonB-dependent receptor TERM 3568 4673199 - 4673231 + T 100 -14.8 -4.14392 | overlap 4673217 ACTGTGCATGCGTAC CTCCAACGGCAGCC ATAAC GGCTGCCGCTGGCG TTTTAGGGCTTGCGA TERM 3569 4673272 - 4673289 + T 76 -9.9 -3.92522 | GCCCTGTTGCGCGCC TGCATGC AAGA GCATGCA TTTATCACGTTGCGC XOO4397 4675029 - 4673428 - | hypothetical protein TERM 3570 4673944 - 4673926 - G 71 -13.8 -2.7035 | overlap 4673923 TTTATCGATATACCA GCGCGCCG GTC CGGCACGC CACTGGGTCTGTTCG TERM 3571 4674388 - 4674411 + g 72 -11 -3.54424 | gap 1, opp_overlap 4674383 4674382 CAACGCAAATGCCAG CCCGGC-GCGA TCT TCGCTGTCGGG TTTGGAACGCTGCAA glyS 4677266 - 4675029 - | glycyl-tRNA synthetase subunit beta TERM 3572 4677389 - 4677413 + rH 90 -15.7 -3.71255 | overlap 4677390 GTGCCCCATACGCTC ACCCCTCTCCC GAG GGGAGAGGGGC TTGTTGCGTCCTTCT TERM 3573 4677390 - 4677412 + rH 87 -19.2 -2.8203 | overlap 4677389 TGCCCCATACGCTCA CCCCTCTCCC GAG GGGAGAGGGG CTTGTTGCGTCCTTC glyQ 4678596 - 4677556 - | glycyl-tRNA synthetase subunit alpha TERM 3574 4677657 - 4677604 - GH 71 -12.9 -3.01712 | opp_overlap 4677604, overlap 4677650 GCGCTGCGCGTAATA CGCCTGCGCCACGCCCTGGGCCAGC GCGC GCACGCGCAGGATGTAACGCTGGCG TTCGGTCACGCTGAT TERM 3575 4680128 - 4680161 + Gr 70 -13.1 -2.87344 | gap 1 ACTCAACGTGCACGC GCCGGT-CGGCTGCCT GGA ATGCCGCCGCACCGGC TATCTGGGCCGGGTG gspE 4678554 - 4680368 + | general secretory pathway related protein XOO4401 4689579 - 4680754 - | hypothetical protein TERM 3576 4680862 - 4680882 + g 70 -2.6 -4.60041 | gap 1 CGTCAGGTTTGCCTG CCT-AATCG GGTC CGGTTGAGG TTTTTGCCGCTCCCT TERM 3577 4681464 - 4681487 + g 75 -8 -4.2461 | overlap 4681465 AGGCGAGCGCCGGCG GCGTGCCTGC CAAC GCCGGCACGG TTTCTTCCTGCCAGT TERM 3578 4682880 - 4682857 - G 80 -14.6 -3.14132 | gap 1 CGGCTGCCCCATGAA GCGCGCCGCCA GCG TGGCGGC-CGC CGAGGTGATGCGCTG TERM 3579 4683450 - 4683472 + g 71 -4.1 -4.51174 | gap 1, overlap 4683451 4683468 CCACGGTGGCGATGC GCTGCT-CCG GCAC CGGCAGCAGA TTTTGCTTGTCGTAG XOO4402 4689663 - 4690034 + | putative transposase XOO4403 4690000 - 4690476 + | putative transposase guaA 4690957 - 4691772 + | glutamine amidotransferase TERM 3580 4691988 - 4692008 + G 71 -12.5 -3.23692 | overlap 4691990 TCGGTGCTGGTGCCG CTGCTGGGC CCG GCCCTGCAG TTCCTGCTGCTGCTG XOO4405 4691832 - 4692731 + | hypothetical protein TERM 3581 4692760 - 4692792 + T 89 -14.4 -3.94933 | gap 1, opp_overlap 4692767, overlap 4692767 ATTGCCGAGGCGTAG C-AAAAAAGCCGCTC GAAA GAGCGGCTTTTTTCG TGTTTTTCCGGTTGG TERM 3582 4692767 - 4692784 + T 100 -12.7 -5.38348 | opp_overlap 4692767, overlap 4692760 AGGCGTAGCAAAAAA GCCGCTC GAAA GAGCGGC TTTTTTCGTGTTTTT TERM 3583 4692784 - 4692767 - T 100 -12.7 -5.14965 | opp_overlap 4692767 4692760 AGGCGTAGCAAAAAA GCCGCTC GAAA GAGCGGC TTTTTTCGTGTTTTT tatC 4693638 - 4692883 - | sec-independent protein translocase tatB 4694282 - 4693635 - | sec-independent translocase tatA 4694525 - 4694298 - | twin argininte translocase protein A TERM 3584 4694585 - 4694565 - R 74 -13.9 -2.82987 | opp_overlap 4694558, overlap 4694556 GGAAGACCCAGGATA CCCCAGCGC ACC GCGCAGGGG GATGACAGTGCTTTA XOO4409 4695614 - 4694598 - | hypothetical protein hemH 4695637 - 4696620 + | ferrochelatase XOO4412 4696739 - 4697473 + | hydrolase XOO4413 4697554 - 4698012 + | hypothetical protein XOO4414 4699089 - 4698283 - | hypothetical protein TERM 3585 4698893 - 4698868 - G 75 -10.3 -3.92075 | ATGCGCATGCAGAAA GCGCTCGCCGG AAGT CAGGCTAGCGC GTAACGGCAAGGTCA rdgC 4700600 - 4699695 - | recombination associated protein XOO4416 4701581 - 4700664 - | hypothetical protein TERM 3586 4700876 - 4700892 + g 75 -7.9 -4.2828 | GCAACATCTTGCCGA CCTGCTG GCG CTGCAGG TTTTCCTGGCTGCCG TERM 3587 4701257 - 4701225 - G 80 -14.9 -3.10796 | opp_overlap 4701216 GCTGACCACCGAATA GGTGTCCTGTTCGAC GAT GTCGAACGGCACACC CAGCGCATCCAGGTA TERM 3588 4701997 - 4702016 + H 77 -2.7 -5.08824 | GGCATGGCATCTTCA GCTTCGC TACAAC GCGCGGC TTTTTTCAATCGCAG xylA 4702185 - 4703522 + | xylose isomerase TERM 3589 4703563 - 4703535 - T 91 -17.5 -3.31792 | overlap 4703557 TGATCATTGCCATAA CACGCGCTTCGTT TTT AACGCAGCGCGTG TGCAACGAATGCCTG salR 4704830 - 4703748 - | sal operon transcriptional repressor TERM 3590 4705736 - 4705753 + GH 70 -2.5 -4.59109 | opp_overlap 4705735 4705736 ACTATCTGGATAAAG CCGCAGC GCTG GCGACGG TTTTTCGCCCCTATG TERM 3591 4707056 - 4707071 + G 72 -9 -4.18908 | AGGCGCAGTGGTGGT GCGATG CCAG CATCGC TTATTTTCAAAGTGT aguA 4704970 - 4707186 + | alpha-glucuronidase XOO4420 4707048 - 4709147 + | sialic acid-specific 9-O-acetylesterase rspA 4709072 - 4710418 + | starvation sensing protein TERM 3592 4711299 - 4711278 - g 76 -9.4 -4.18494 | gap 1 GATCCTGAGCCAAAA CGCCCTGCC TGCGG GGC-GGGCG CATCCGGTCATCAAC TERM 3593 4711316 - 4711328 + G 70 -4.7 -4.36914 | opp_overlap 4711314, overlap 4711317 ATCCGGTCATCAACG CCGGC CAC GCCGA TTTTGTGACCACGCC xylB 4710418 - 4712118 + | xylosidase; arabinosidase TERM 3594 4712350 - 4712300 - g 93 -11.1 -4.63932 | gap 2 GACGCTGGAAGAAAA GGC-CGCGCAGATGCAGAA-CGCCG CGC CGGCGATTCCGCGCCTGGGGGTGCC TGCCTACGATTGGTG TERM 3595 4714740 - 4714706 - g 74 -10.6 -3.79043 | overlap 4714709 CACCATCAACGCAAA GGATGCGCTGCGCATC TAC GACGCGCAGCGCAAGG CGTACACGGTAGACC TERM 3596 4714737 - 4714709 - g 100 -21.1 -2.98034 | overlap 4714706 CATCAACGCAAAGGA TGCGCTGCGCATC TAC GACGCGCAGCGCA AGGCGTACACGGTAG XOO4423 4712121 - 4714835 + | glucan 1,4-beta-glucosidase mtlD 4715058 - 4716530 + | mannitol dehydrogenase XOO4425 4717064 - 4716756 - | bleomycin resistance protein TERM 3597 4717496 - 4717467 - R 100 -19.3 -5.4833 | CCAGGCAACAAAAAA CGCCAGGGAAGGC CTTG GCCTTCCCGGGCG TTACACAGGTATCAG XOO4426 4718563 - 4717508 - | hypothetical protein hrmI 4720209 - 4718791 - | glucuronate isomerase XOO4428 4721227 - 4720250 - | secreted xylanase TERM 3598 4721507 - 4721491 - R 77 -2.1 -5.07053 | opp_overlap 4721494, overlap 4721481 4721494 AAGCAGCGTAAAAAA CACGCCG ACC CGCCTTG GTGTGCGGCAGTGGC XOO4429 4722526 - 4721645 - | putative xylanase exuT 4723904 - 4722645 - | hexuranate transporter TERM 3599 4723452 - 4723425 - G 75 -7.6 -4.21607 | gap 1 GCCAGTGAACAGAAA CGCCGACTGCCAG CCC CAGGCCGT-GGCG ATCAACGGCACCAGC TERM 3600 4723630 - 4723608 - G 74 -2.6 -4.74801 | overlap 4723623 CAAGCCCAGGAAAAA TCGTGCGATC GCA AAGCCCACGA CGCTGGTGGCCAAGG TERM 3601 4725963 - 4725940 - g 76 -5.9 -4.50058 | overlap 4725954 4725955 TATCCAGAACGAAAA GCGCCAGAC CGAAAC GCGTGGCGC GCGCGCCGACCTGCA TERM 3602 4726376 - 4726324 - g 74 -12.8 -3.28912 | gap 2, opp_overlap 4726325, overlap 4726325 CTACATTGAGACCAA TGCGGACGCCGACGTCTGGAATCGCA CCA TGCGCTTC-A-ACGCCGGCGTGCGCT ATGTGACCACCGACC TERM 3603 4726325 - 4726375 + G 73 -14.1 -2.87132 | gap 2, opp_overlap 4726324 4726325 TACATTGAGACCAAT GCGGACGCCGACGTCTGGAATCGCA CCA TGCGCTTC-A-ACGCCGGCGTGCGC TATGTGACCACCGAC TERM 3604 4726375 - 4726325 - g 81 -16.3 -2.57026 | gap 2, opp_overlap 4726325, overlap 4726324 TACATTGAGACCAAT GCGGACGCCGACGTCTGGAATCGCA CCA TGCGCTTC-A-ACGCCGGCGTGCGC TATGTGACCACCGAC cirA 4724372 - 4727341 + | TonB-dependent receptor TERM 3605 4728633 - 4728646 + G 85 -8.1 -4.61482 | GTGGAAGAACCACCG TCGCG CCAC CGCGA TTATTTTTTCGGCGA xylP 4727338 - 4728927 + | transport protein xsa 4728959 - 4729993 + | xylosidase; arabinosidase TERM 3606 4730278 - 4730247 - f 95 -11.4 -4.63932 | GAGCGGCCAACAAAA CGACTGCGCTCACC GCCA GGCGGGCGCGGCCG GTGCTCGGACTCGGC XOO4434 4730359 - 4730766 + | putative transposase XOO4439 4732262 - 4732086 - | hypothetical protein TERM 3607 4732224 - 4732244 + g 81 -11.1 -4.11906 | opp_overlap 4732218 4732217, overlap 4732225 CTTGAAAATCGGCAC TGCGTCGGT GCC GCCGACGCG TTCTTTCTGCGTTGT TERM 3608 4732617 - 4732632 + G 74 -4.6 -4.55697 | GGCGTTGGAGATCTC GCGCTG GCCA CAGGGC TTTGTTTGTCCGCGT XOO4440 4732465 - 4733025 + | transposase TERM 3609 4733352 - 4733368 + G 74 -10.1 -3.70902 | opp_overlap 4733347, overlap 4733353 CTGGCAGAGACGATG TGGCGGT TCA ACCGCCG TTTCGATCTGACCCG XOO4441 4733022 - 4733471 + | transposase TERM 3610 4733509 - 4733539 + F 76 -15.4 -2.52676 | opp_overlap 4733500 4733498 4733516 4733529, overlap 4733514 4733516 ATCACAGTGGCTTCG CCACACACGCGCGC AAT GCACGCGTGTGTCG TACATTCGCGACGTG TERM 3611 4733514 - 4733534 + F 70 -12.5 -2.82933 | opp_overlap 4733516 4733529, overlap 4733509 4733516 AGTGGCTTCGCCACA CACGCGCGC AAT GCACGCGTG TGTCGTACATTCGCG XOO4442 4733716 - 4734105 + | hypothetical protein XOO4443 4734186 - 4734632 + | transposase TERM 3612 4735942 - 4735930 - g 77 -4.7 -4.64766 | overlap 4735931 4735932 TCGAGATGGCAAAAA CGCTG CGG CTGCG CACCATTGCCGAAGG XOO4445 4735104 - 4736093 + | hypothetical protein TERM 3613 4736126 - 4736110 - T 100 -15.1 -5.28176 | opp_overlap 4736110 CGCAGCGACAAAAAA GGCCGCC ATT GGCGGCC TTTCAATGTCGATCA TERM 3614 4736110 - 4736126 + T 90 -15.1 -3.71873 | opp_overlap 4736110 CGCAGCGACAAAAAA GGCCGCC ATT GGCGGCC TTTCAATGTCGATCA XOO4446 4737280 - 4736159 - | hypothetical protein XOO4447 4738384 - 4737290 - | oxidoreductase TERM 3615 4738328 - 4738306 - G 77 -16.2 -2.62184 | opp_overlap 4738292, overlap 4738291 4738289 GGTGCGGCGACACCA GCCGGCGCGC CAG GCGTGCCGGC AGCGGGGACGTGGAC XOO4448 4738459 - 4739139 + | TetR family transcriptional regulator XOO4449 4739648 - 4739172 - | putative transposase XOO4450 4739985 - 4739614 - | putative transposase XOO4451 4740036 - 4741418 + | putative ISXo8 transposase TERM 3616 4742448 - 4742422 - g 71 -7.3 -4.18494 | gap 1, overlap 4742423 TACTTGGATTCAAAA CGCCCCTCGAAG TCTT CTCCGAGGAG-G TCCTCAACAGCGTTG XOO4452 4741509 - 4742477 + | hypothetical protein XOO4453 4742933 - 4742580 - | hypothetical protein XOO4454 4743529 - 4742924 - | hypothetical protein TERM 3617 4743613 - 4743644 + H 80 -5.6 -4.69053 | GCCGATTCCGAGCAC CGGCCGCGCCCGCC TGGC GGTGAGCTCTGTCG TTTTGTTAGCTAGTG TERM 3618 4744291 - 4744269 - g 77 -12.6 -3.64703 | opp_overlap 4744290 TCGCGCTGACCGAAA CCGGCCGCGC GCT GCGCAGCAGG GCAGGCGCGGTGCCG XOO4455 4743944 - 4744402 + | MarR family transcriptional regulator TERM 3619 4744578 - 4744522 - g 70 -2.5 -4.62069 | opp_overlap 4744527, overlap 4744524 GCCTCACCTGAAAAA GTCCTCTACACCGCCCACGCCACTGCC ACC GGCGGCCGCGAAGGCCGTGCCGTGTCC TCGGACAAGGCACTG ohr 4744399 - 4744932 + | organic hydroperoxide resistance protein TERM 3620 4744971 - 4745007 + T 100 -21 -3.41878 | gap 1, opp_overlap 4744937 4744977 TGCGCATGTCGGTAT CGA-CAACGGCCCGGCG CATG CGTCGGGCCGTTGCTCG TTGTGGCTTGAGGAG TERM 3621 4745000 - 4744977 - T 84 -15.2 -3.35679 | opp_overlap 4744971 TGTCGGTATCGACAA CGGCCCGGCG CATG CGTCGGGCCG TTGCTCGTTGTGGCT XOO4457 4746044 - 4745181 - | hypothetical protein TERM 3622 4745957 - 4745910 - G 72 -6.9 -4.25104 | gap 1, overlap 4745911 TTGCCGCGAGGAAAA CTGCGGGCTTGCGGCCTCAGCA TGCGC CGCGAAGGCCGCCAGCA-GCAA CAGCGGTGCGAGAAA XOO4458 4746283 - 4747218 + | putative transposase TERM 3623 4747630 - 4747670 + T 91 -9.7 -4.56597 | opp_overlap 4747630 4747631, overlap 4747631 TCTCGCAGGAAGAAA TGTGGGGAAACCTCAGGGT CAG GTTCTTAGGTATCCCCACG TTTTTAAAGCACCAA XOO4459 4748915 - 4747674 - | ISxac1 transposase XOO4460 4749582 - 4749220 - | hypothetical protein XOO4461 4749648 - 4749896 + | DNA-binding protein TERM 3624 4751265 - 4751238 - T 75 -3.3 -4.87665 | gap 1, overlap 4751239 4751242 GTCCACCGAGAAAAA GGACCGTTCCGG GTCGG CCTGATCGG-CC ACCAGGTAGGTGAAC XOO4946 4751986 - 4751654 - | hypothetical protein XOO4462 4752455 - 4751979 - | hypothetical protein XOO4463 4752892 - 4752458 - | hypothetical protein TERM 3625 4752665 - 4752700 + g 82 -15.4 -3.09635 | gap 1, opp_overlap 4752653 4752654 4752670 CAACTGGCAACCGCA GGACAGCCGGTCTC-CG TGA CGAGCGACCGGCTGCCC TTCAATCATCAACGT XOO4464 4753590 - 4753922 + | hypothetical protein TERM 3626 4753941 - 4753975 + F 81 -7.9 -4.39571 | gap 1, overlap 4753942 CGCTGCTGTCACCGG TGCCTGCGTGCCGA CCCCACAC TCG-CACGCGGGCG TTTTGCGTTTGTGGC XOO4465 4754171 - 4754269 + | hypothetical protein TERM 3627 4754276 - 4754260 - T 71 -5.8 -4.29049 | overlap 4754270 CAAGCAGGAAAAGAA GGGCAA GTAAT TCGCCC GGCCTGTTGGCAGGC XOO4466 4755766 - 4754372 - | hypothetical protein TERM 3628 4754734 - 4754747 + g 74 -2.3 -4.84359 | overlap 4754723 4754714 4754735 GGATGCCTTCCCACA GGCCT TTCA AGGCG TTTTTCTGGACATCG vapI 4756994 - 4756704 - | virulence associated protein XOO4468 4757293 - 4757012 - | hypothetical protein TERM 3629 4757338 - 4757301 - R 72 -12.1 -3.34043 | overlap 4757302 4757304 4757307 4757324 CTGATCATGTGACAA CCATAACGGCCTGCGTT ATAT AACGCAACCCGTTACGA ATGTGCAGTCTGCCA TERM 3630 4757337 - 4757302 - R 71 -13.4 -2.60212 | overlap 4757301 4757304 4757307 4757324 TGATCATGTGACAAC CATAACGGCCTGCGTT ATAT AACGCAACCCGTTACG AATGTGCAGTCTGCC recD 4759697 - 4757388 - | exodeoxyribonuclease V alpha chain recB 4763934 - 4759834 - | exodeoxyribonuclease V beta chain recC 4767410 - 4763904 - | exodeoxyribonuclease V gamma chain TERM 3631 4765509 - 4765456 - GH 87 -14.5 -3.66646 | gap 1 AATACCGCAGCGAAA TGC-GCACGCACCACCTCGGCCGGCA CCT TGCCGGCGTAGTCGGCGCGCACTGCA TCGCGGGCGAACTGG TERM 3632 4766051 - 4766022 - GH 100 -10.7 -4.67904 | gap 1, opp_overlap 4766034, overlap 4766024 GAGCAAGGTCAAAAA CACTTCGGCCAGCG GCT CGCTGGCCAACG-G ACTGGCATCGGCCAG TERM 3633 4766050 - 4766024 - GH 93 -14.4 -3.94933 | opp_overlap 4766034, overlap 4766022 GCAAGGTCAAAAACA CTTCGGCCAGCG GCT CGCTGGCCAACG GACTGGCATCGGCCA TERM 3634 4766320 - 4766304 - GH 71 -9.3 -3.68073 | CACCGCAGGCAACAA CGCAGGC ACC GCCGGCG CGCGGCGATGGAACA TERM 3635 4766670 - 4766631 - GH 70 -11.4 -3.36766 | gap 1, opp_overlap 4766605, overlap 4766626 CAGATAGAAATGCAA CGTGCCCACGCGCGCTTGC GTG GCCAGCACGCGCAAG-ACG TCCGGCGAGATATTC TERM 3636 4767524 - 4767509 - H 77 -2.6 -5.02074 | gap 1, overlap 4767518 4767521 GGATTCGTTAAAAAA TAGC-CA AAG TGAGCTA ACTTGCTGTCAGCAC XOO4472 4767721 - 4770375 + | hypothetical protein TERM 3637 4770729 - 4770763 + T 91 -18.6 -3.07816 | opp_overlap 4770709 4770729 4770730 CGTCGACATCACAAA CGCGATGGGCCGGG GTGTTCG CCCGGCCCATCGCA TTGCATGACTGCACG TERM 3638 4770763 - 4770729 - T 100 -20.8 -4.0162 | opp_overlap 4770729, overlap 4770709 4770730 CGTCGACATCACAAA CGCGATGGGCCGGG GTGTTCG CCCGGCCCATCGCA TTGCATGACTGCACG TERM 3639 4770762 - 4770730 - T 100 -22.1 -3.00651 | opp_overlap 4770729, overlap 4770709 4770729 GTCGACATCACAAAC GCGATGGGCCGGG GTGTTCG CCCGGCCCATCGC ATTGCATGACTGCAC XOO4475 4774426 - 4771430 - | hemagglutinin TERM 3640 4773206 - 4773250 + g 80 -14.9 -3.05844 | GTAGGTGTAGGCCGC CGTGCCGCCGCTGGCGGTCAG CGT CTGGCTGTAGGCGGTGCCACG TGTTGCGGTGGGGAC YXOOp17 4774434 - 4774553 + | hypothetical protein XOO4476 4775731 - 4776258 + | microcystin dependent protein TERM 3641 4776669 - 4776651 - g 82 -5.9 -4.71828 | ATGGCACGAAGAAAA CCGCTTG GCCTG CGAGCGG TGTCGCCCTGTCGAC XOO4478 4776317 - 4776853 + | microcystin dependent protein TERM 3642 4777042 - 4777057 + G 74 -4.6 -4.55697 | GGCGTTGGAGATCTC GCGCTG GCCA CAGGGC TTTGTTTGTCCGCGT TERM 3643 4777775 - 4777791 + G 74 -10.1 -3.70902 | opp_overlap 4777770, overlap 4777776 CTGGCAGAGACGATG TGGCGGT TCA ACCGCCG TTTCGATCTGACCCG XOO4479 4776881 - 4777906 + | transposase TERM 3644 4778077 - 4778047 - g 71 -11.9 -3.2794 | gap 1 GTGGAGCTACACCAA GCGCA-CGGGCG TGGCGTGG CGCCCGCTGCGC AGTGGCGAGAAGCTG XOO4480 4777919 - 4778194 + | putative transposase sodC2 4778929 - 4778189 - | superoxide dismutase yojM 4779497 - 4778892 - | superoxide dismutase like protein ntrC 4781441 - 4779993 - | two-component system regulatory protein TERM 3645 4780971 - 4780957 - GR 76 -7 -4.41616 | ATCGCGCGAAACAAA GCCTGC ATA GCGGGC GTGTCGCCGATCAAC ntrB 4782468 - 4781413 - | two-component system sensor protein TERM 3646 4782695 - 4782664 - R 76 -8.7 -4.14392 | gap 2, opp_overlap 4782669, overlap 4782665 GGGCAAGGGGGAAAA CGGGACCCGGCTGGG CATT CCCGGCCGGGT-C-G TTGCGCCACCCGCAG TERM 3647 4782669 - 4782692 + r 84 -17.4 -2.70932 | opp_overlap 4782664 4782665 AGGGGGAAAACGGGA CCCGGCTGGG CATT CCCGGCCGGG TCGTTGCGCCACCCG amtB 4784215 - 4782740 - | ammonium transporter glnB 4784543 - 4784205 - | nitrogen regulatory protein P-II TERM 3648 4784592 - 4784570 - R 89 -14.8 -3.9243 | GAATGGTGGAAAGAA CCGGACGGCA TTG CGCCGCCCGG CGATGTCAGTCACCT glnA 4786230 - 4784821 - | glutamine synthetase TERM 3649 4786403 - 4786389 - H 95 -10 -4.41087 | opp_overlap 4786389 4786388 4786400 ATAATCAAACACAAA GCACCA ATA TGGTGC GTTCTACAATGCACT uppP 4786452 - 4787249 + | undecaprenyl pyrophosphate phosphatase TERM 3650 4787308 - 4787263 - f 93 -16.9 -3.53366 | gap 1, opp_overlap 4787303, overlap 4787264 GAGACCTAACGACAA CTGCCGGGCCTGCACGTCGC GATCGCG GCCAGGTGCAGGCCCGGC-G CCCACGTCGTGACGC TERM 3651 4787308 - 4787264 - f 84 -17.1 -2.71537 | opp_overlap 4787303, overlap 4787263 AGACCTAACGACAAC TGCCGGGCCTGCACGTCGC GATCGCG GCCAGGTGCAGGCCCGGCG CCCACGTCGTGACGC XOO4490 4787386 - 4788192 + | hypothetical protein XOO4493 4790095 - 4789346 - | hypothetical protein TERM 3652 4789624 - 4789600 - G 86 -18.5 -2.56596 | opp_overlap 4789600 4789614, overlap 4789596 GCGTGTAGGAATTCA GGCCCTGCCGG GCA CCGGCCGGGCC GGGCGGTTGCTGCTT XOO4494 4792224 - 4790152 - | hypothetical protein XOO4495 4793627 - 4792638 - | hypothetical protein TERM 3653 4792691 - 4792701 + g 72 -8.2 -4.07568 | overlap 4792674 GTTCGGCGAAGCCGT CGCC GCG GGCG TTTTCCAGAAAGCCG TERM 3654 4793444 - 4793409 - G 76 -13.8 -3.14564 | overlap 4793411 CCAGCCGTGCAGCAA CAGCACGGTGCCGCGC GGTG GCGCGTCGCCGCGCGG AACGCTCATCCAGCC TERM 3655 4793442 - 4793411 - G 80 -15 -3.13522 | overlap 4793409 AGCCGTGCAGCAACA GCACGGTGCCGCGC GGTG GCGCGTCGCCGCGC GGAACGCTCATCCAG XOO4496 4794592 - 4793687 - | acetyltransferase TERM 3656 4794433 - 4794413 - G 70 -11.1 -3.39717 | ATGCAGCAACAGCAA CGGCACCCG ATA CAGGTACCG GAGCAAACGCAACGG TERM 3657 4794474 - 4794446 - G 73 -11.8 -3.30701 | opp_overlap 4794463, overlap 4794441 CCGGAGCAAACGCAA CGGAGCGCCA-GCG TCG CGCGTGGCG-TCCG GGGATGACTCGCTCA XOO4497 4795038 - 4794610 - | hypothetical protein TERM 3658 4795344 - 4795324 - R 84 -11.1 -4.17002 | CAGCAAATCAAAGAA TCGGCACCA GCC CGGCGCCGA AGGCGGTGAGCATGC cls 4797331 - 4795316 - | cardiolipin synthase XOO4499 4797900 - 4797328 - | hypothetical protein TERM 3659 4797769 - 4797779 + g 70 -4.6 -4.35116 | CCCCTCGATCTTCAT TCCG AAA CGGG TTTTGATCTCGAATC XOO4500 4798365 - 4797904 - | hypothetical protein parA 4799196 - 4798396 - | partition protein XOO4502 4800298 - 4799381 - | hypothetical protein TERM 3660 4800553 - 4800521 - R 100 -17.7 -3.76952 | CCCACCCAATGCAAA CACCACGCTGCGGGA CAT CCCCGCAGCGCAGCG AGGCGCTTACGGAAA XOO4503 4800769 - 4800560 - | hypothetical protein XOO4504 4801216 - 4800833 - | hypothetical protein TERM 3661 4802498 - 4802473 - g 93 -3.3 -5.47159 | gap 1, overlap 4802474 GTGGAAGAGAAAAAA GCCTTCATC-GA GCG CCAGATGAAGGA GCTGTTCTACAACTG TERM 3662 4802746 - 4802713 - g 80 -13.9 -3.35992 | gap 1, opp_overlap 4802726, overlap 4802720 ATGGATGCCAAGGAA GCGGAAATGGCGCTGC CGC GC-GCGCAATTCCCGC GCGTGCCGCATTACT TERM 3663 4802726 - 4802756 + G 73 -11.8 -3.37959 | opp_overlap 4802720 4802713 AAGCGGAAATGGCGC TGCCGCGCGCGC AATTCCC GCGCGTGCCGCA TTACTGTTCGGGTTG TERM 3664 4803325 - 4803304 - g 75 -2.9 -4.74103 | gap 1, overlap 4803305 4803306 TGCGCAACCGAAAAA CGCCGC-CGT CGC AAGCGCGGCA AGCTGATCGACCCGC iorA 4801390 - 4805097 + | indolepyruvate ferredoxin oxidoreductase TERM 3665 4805192 - 4805226 + F 83 -15.8 -3.17194 | opp_overlap 4805192 4805214 GGCATGCAGATGTAA CCGATCGGCGACATTG CAC CAATGTAACCGATCGG TTACATTGCAGCCAT TERM 3666 4805226 - 4805192 - f 91 -18 -3.1355 | opp_overlap 4805192, overlap 4805214 GGCATGCAGATGTAA CCGATCGGCGACATTG CAC CAATGTAACCGATCGG TTACATTGCAGCCAT XOO4506 4805240 - 4805860 + | transcriptional regulator hipA 4805857 - 4807134 + | HipA XOO4508 4808165 - 4807179 - | hypothetical protein XOO4509 4809583 - 4808162 - | hypothetical protein XOO4510 4809517 - 4810698 + | hypothetical protein yehZ 4812457 - 4810985 - | ABC transporter amino acid permease yehX 4813236 - 4812454 - | ABC transporter ATP-binding protein XOO4513 4813605 - 4813240 - | hypothetical protein XOO4514 4814830 - 4813625 - | fatty acid desaturase ylmA 4814963 - 4815835 + | ABC transporter ATP-binding protein XOO4517 4816024 - 4817034 + | hypothetical protein TERM 3667 4818554 - 4818544 - g 74 -5.4 -4.56597 | TCGCGTTGGGAAAAA TTGC GCG GCAA GGAAGAGGACTGCGT XOO4518 4817458 - 4818579 + | hypothetical protein fpvA 4819195 - 4819091 - | ferripyoverdine receptor TERM 3668 4819359 - 4819374 + GH 74 -4.6 -4.55295 | GGCGTTGGAGATCTC GCGCTG GCCA CAGGGC TTTGTTTGTCCGCGG XOO4520 4819207 - 4819896 + | transposase XOO4949 4819851 - 4819946 + | hypothetical protein XOO4521 4819943 - 4820041 + | transposase TERM 3669 4820093 - 4820109 + G 74 -10.1 -3.70902 | opp_overlap 4820065 4820088, overlap 4820094 CTGGCAGAGACGATG TGGCGGT TCA ACCGCCG TTTCGATCTGACCCG XOO4522 4820090 - 4820224 + | transposase TERM 3670 4820451 - 4820480 + T 86 -6.6 -5.03314 | gap 1, overlap 4820457 CAAGCACTTGATCGA TATGCAGCCTCAC CTGCC GTGAGGCT-TATA TTTTTTGCGGATCGG TERM 3671 4820457 - 4820475 + T 81 -10.3 -4.18465 | overlap 4820451 CTTGATCGATATGCA GCCTCAC CTGCC GTGAGGC TTATATTTTTTGCGG TERM 3672 4821485 - 4821502 + T 75 -4 -4.79949 | overlap 4821480 4821486 GCTGGGCATAGGCCG CCGGCG TCATTC CGCCGA TTGTTTTTTTGGGGC XOO4950 4822535 - 4822272 - | IS1404 transposase XOO4525 4822672 - 4823049 + | putative transposase XOO4526 4823713 - 4823216 - | hypothetical protein TERM 3673 4823620 - 4823584 - GT 72 -13 -3.05384 | gap 1, overlap 4823587 GGCCGGCGCATGCAA CCAGCGCGCGACGACGA GCGG TCGTCGCCGCG-GCCGC TGCCACGCACCGAGC TERM 3674 4823617 - 4823587 - GT 78 -15.5 -2.75064 | gap 1, overlap 4823584 CGGCGCATGCAACCA GCGCGCGACGACGA GCGG TCGTCGCCGCG-GC CGCTGCCACGCACCG dkgB 4824467 - 4823664 - | 2,5-diketo-D-gluconate reductase B XOO4528 4825557 - 4824529 - | quinone oxidoreductase mocA 4826667 - 4825696 - | oxidoreductase XOO4530 4826786 - 4827754 + | hypothetical protein TERM 3675 4827761 - 4827797 + F 87 -17.3 -2.90212 | opp_overlap 4827759 AAGCGCTAAGGCAGT GCTGCATGCCGGCGCGT TGC GCGTGTCGGCATGCAGA TCTCTGAAATCATCG XOO4531 4827817 - 4828419 + | pseudouridylate synthase XOO4532 4829182 - 4828742 - | hypothetical protein hrpB 4831816 - 4829345 - | ATP-dependent RNA helicase TERM 3676 4831672 - 4831640 - G 89 -18.3 -3.14132 | opp_overlap 4831633 CTGGCGCGCCATGAA CTGCGCCGCGCTGCG GGC CGCCACGCGGCGCGG CTCCAGCATCACGAT XOO4534 4833008 - 4832535 - | hypothetical protein TERM 3677 4833272 - 4833222 - R 100 -16.9 -5.75342 | gap 1 GCCGGGTAAAAAAAA CGGCTCCAGTCGCGATCAGGCAAT CGGG ACAGCCCG-TCGCGGCTGAAGCCG CTCCTACATGGAATG XOO4535 4834640 - 4833321 - | RTS beta protein TERM 3678 4833451 - 4833415 - G 81 -12.1 -3.85817 | overlap 4833416 ATTTCCGCGGAGAAA CCCGGCACGTCCGGCGC CAG GTAGCGGCCGTGCCGGA TGCGCACCGGGTCCA TERM 3679 4835120 - 4835098 - R 78 -3.3 -5.06414 | TTCGCGCAAGAAAAA TGCTTAGCG GTGGA CGCAATGCA CTGCAGTACGACGTC XOO4536 4836021 - 4835164 - | 2-hydroxyhepta-2,4-diene-1,7-dioateisomerase/5-carboxymethyl-2-oxo-hex-3-ene-1,7-dioatedecarboxylase ucpA 4836962 - 4836192 - | oxidoreductase XOO4538 4837831 - 4836959 - | hypothetical protein XOO4539 4838949 - 4837828 - | oxidoreductase XOO4540 4839151 - 4840248 + | xylosidase XOO4951 4840937 - 4840758 - | hypothetical protein TERM 3680 4841112 - 4841143 + r 95 -11.4 -4.63932 | TGGCGTTTCGAGCAC CGGCCGCGCCCGCC TGGC GGTGAGCGCAGTCG TTTTGTTAGCCGCTC tcsR 4842406 - 4841501 - | two-component system regulatory protein TERM 3681 4841717 - 4841749 + g 74 -10.5 -3.7104 | overlap 4841718 GCGAAATTGTTGCGG TGTGAGGTCGCGCAG ACG CTGACCGACCTCGCG TTCTTCGCTGTCGGT TERM 3682 4842282 - 4842267 - G 71 -7.6 -4.11692 | overlap 4842272 CAGGGATTTCGAAAA GCGAAT CGCG ATTCGC AATAGCCGATGTCAG acs 4844521 - 4842431 - | acetyl-CoA synthetase TERM 3683 4843970 - 4843984 + g 71 -7.8 -4.15044 | opp_overlap 4843969 CATCGGCAGATAGAT GGTGAC CCG GTCGCC TTTCTTGACGCCCAG XOO4545 4844537 - 4845025 + | hypothetical protein XOO4546 4845022 - 4846062 + | hypothetical protein TERM 3684 4846073 - 4846112 + F 74 -12.9 -3.37493 | gap 2, overlap 4846074 TCTAAGTTCCTGCCA CTGGCGG--CCCGCTCCAC TGCG GTGGAGCGGGCACCGCCGC TTGATGTCTTACCAG TERM 3685 4846074 - 4846111 + F 80 -16.4 -2.62175 | gap 2, overlap 4846073 CTAAGTTCCTGCCAC TGGCGG--CCCGCTCCAC TGCG GTGGAGCGGGCACCGCCG CTTGATGTCTTACCA XOO4547 4846113 - 4846466 + | hypothetical protein TERM 3686 4847918 - 4847899 - g 71 -10 -3.61398 | opp_overlap 4847904 GTTGCTGTGGAAGAA CTGCACCA CCCG TGGCGCAG TGACCGGTGGTTTCC actP 4846463 - 4848190 + | acetate permease TERM 3687 4848180 - 4848198 + T 70 -7.4 -4.09805 | GTGCCAGCGGTGCAT CCGGTC ACTGATC GACCGG TTTCATTGTTGGTGC TERM 3688 4848217 - 4848248 + T 93 -14.5 -4.08216 | gap 1, overlap 4848223 CATTGTTGGTGCAAT CGCA-GACGCCGGC CCAGT GCCGGCGTTTTGCG TTTTGGCCAGGCTGC TERM 3689 4848223 - 4848241 + T 100 -13.1 -4.4267 | overlap 4848217 TGGTGCAATCGCAGA CGCCGGC CCAGT GCCGGCG TTTTGCGTTTTGGCC XOO4549 4849499 - 4848798 - | transcriptional regulator xthA1 4849856 - 4850635 + | exodeoxyribonuclease III XOO4551 4850605 - 4851069 + | hypothetical protein TERM 3690 4851078 - 4851097 + TF 84 -16.4 -3.05384 | opp_overlap 4851039 4851078, overlap 4851092 4851096 AAGCTGACACGGAAA CGCCCGGG CAGA CCCGGGCG TTGCATGCAGCGACG TERM 3691 4851097 - 4851078 - Tf 93 -16.4 -3.71645 | opp_overlap 4851078 4851092 4851096, overlap 4851039 AAGCTGACACGGAAA CGCCCGGG CAGA CCCGGGCG TTGCATGCAGCGACG mltA 4851520 - 4851131 - | transglycosylase associated protein hetI 4851509 - 4852105 + | HetI XOO4554 4853695 - 4852124 - | hypothetical protein TERM 3692 4852267 - 4852279 + g 76 -6.2 -4.58395 | GCGGCGAGGTGTTGG GCGC AGGTG GCGC TTTTTGAAACATCAC phoD 4855500 - 4853872 - | alkaline phosphatase D TERM 3693 4854469 - 4854501 + g 71 -12 -3.18582 | opp_overlap 4854467, overlap 4854469 GTCGGCCACCACATG CCC-GCCGCGCCAGCC ATT GGCTTGCG-GGCAGGG TTGCTCGCTGCGGTA TERM 3694 4855542 - 4855520 - H 72 -7.6 -4.10781 | opp_overlap 4855519 4855520 4855522 4855530, overlap 4855525 AACAAGGCAGAGAAA CAGACGCAAC CAT GGTGCGGCTG CTTCATGTAAGTTTT gidB 4855723 - 4856361 + | glucose-inhibited division protein B TERM 3695 4856890 - 4856865 - f 73 -3.1 -4.7497 | overlap 4856867 4856868 GCCATCTACGAAAAA GAGTGGGCCTG GCGC CAGGCCGAGAC CGGCCAGGCCGACGA XOO4557 4857430 - 4857789 + | hypothetical protein TERM 3696 4857812 - 4857794 - f 76 -10.2 -3.88498 | GCGGCACATAGGAAA GCCGTGCA TAA TGCGCGGC TCGCTGTGCCCGGAT rpmG 4858224 - 4858391 + | 50S ribosomal protein L33 TERM 3697 4858418 - 4858449 + T 100 -18.8 -3.54543 | opp_overlap 4858424, overlap 4858419 4858424 CTGGATCCGCTTTCA AGCAAACACCCGCC GCAA GGCGGGTGTTTGCG TTTGGGGGAATCGAT TERM 3698 4858419 - 4858448 + T 100 -22.3 -2.72511 | opp_overlap 4858424, overlap 4858418 4858424 TGGATCCGCTTTCAA GCAAACACCCGCC GCAA GGCGGGTGTTTGC GTTTGGGGGAATCGA TERM 3699 4858443 - 4858424 - T 89 -15 -3.90112 | opp_overlap 4858419 4858418 4858424 CCGCTTTCAAGCAAA CACCCGCC GCAA GGCGGGTG TTTGCGTTTGGGGGA TERM 3700 4858424 - 4858443 + T 89 -15 -3.84451 | opp_overlap 4858424, overlap 4858419 4858418 CCGCTTTCAAGCAAA CACCCGCC GCAA GGCGGGTG TTTGCGTTTGGGGGA fldW 4859291 - 4858824 - | 4-oxalomesaconate hydratase TERM 3701 4859251 - 4859224 - G 70 -5.5 -4.23647 | opp_overlap 4859224, overlap 4859225 AAATCAGTGAACAAA TCGCCTTCAAG AAATTG CATGAAGGCGG TGATGTCGGCATTGA XOO4560 4860523 - 4859288 - | transposase fldA 4862450 - 4861395 - | hypothetical protein TERM 3702 4862166 - 4862196 + g 70 -11 -3.40597 | overlap 4862164 GCCGGCCAGCATGTT GCCGCAGTTCTGCG CAT CGCTGACCTGCGCC TGTTTCACTGCGACC TERM 3703 4862359 - 4862349 - G 80 -4.6 -4.72272 | GGCGCGCAGCAAAAA CGCA TCG CGCG CGGCGGGGTCGGCAG TERM 3704 4862416 - 4862397 - G 93 -4.2 -5.24129 | gap 1, overlap 4862398 GTCGGCCAGAAAAAA GCCGC-CCT TGG AGGTGCCGC CGCGCATCCACATCG fldZ 4863114 - 4862443 - | hypothetical protein TERM 3705 4863779 - 4863830 + G 84 -17.2 -2.73875 | gap 1, opp_overlap 4863787, overlap 4863776 GTCGCCACCTTGCGC TCGCAACACGCCGGCCGCCTCACCC TGG GGGTGATGCCGCTGGCGCGC-GCGA TCCTGTTGCCGCAGG TERM 3706 4863823 - 4863787 - g 88 -17.9 -3.01712 | opp_overlap 4863779 4863776 CTTGCGCTCGCAACA CGCCGGCCGCCTCACCC TGG GGGTGATGCCGCTGGCG CGCGCGATCCTGTTG fldY 4863212 - 4864519 + | transcriptional regulator cls 4864536 - 4865954 + | cardiolipin synthase XOO4952 4866123 - 4866025 - | hypothetical protein XOO4568 4866509 - 4866153 - | lactoylglutathione lyase and related lyase TERM 3707 4867391 - 4867430 + G 73 -5.7 -4.38154 | gap 2, overlap 4867392 TCCGGCCGTTGAGCC AGGCGCT-GT-GGCAGACG CTGT CGTTCGCCGACCAGCGCCG TTTTCTGCGGCATGT XOO4569 4866526 - 4867920 + | hypothetical protein TERM 3708 4868104 - 4868118 + F 71 -12.8 -3.05384 | CTCCGCGCCCCAGCA CGCGCC AGC GGCGCG TTCGCTCAAAGACAC uvrD 4868268 - 4870454 + | DNA-dependent helicase II TERM 3709 4870462 - 4870481 + T 72 -4.2 -4.56597 | overlap 4870463 TTGTGTAGTCGGGTT TGCATTCG CCTG CGATTGCG TTTTTAGCAGGCGAC XOO4571 4872451 - 4871393 - | transposase TERM 3710 4871566 - 4871550 - G 74 -10.1 -3.70902 | opp_overlap 4871545 4871562, overlap 4871551 CGGGTCAGATCGAAA CGGCGGT TGA ACCGCCA CATCGTCTCTGCCAG TERM 3711 4872299 - 4872284 - G 74 -4.6 -4.55697 | ACGCGGACAAACAAA GCCCTG TGGC CAGCGC GAGATCTCCAACGCC yhdG 4873991 - 4872576 - | amino acid transporter TERM 3712 4873027 - 4873011 - G 74 -2.1 -4.82901 | overlap 4872990 TTGCCCGTACAAAAA CGCCAGC AGC ACCGTCG GCAACGCAATGATCG TERM 3713 4875792 - 4875778 - g 71 -10 -3.68222 | overlap 4875790 GGCCAATCGCAACAA CGCTTC ACC GAAGCG CTGGGCCAGCGCTTG XOO4573 4874482 - 4876806 + | hypothetical protein TERM 3714 4876974 - 4876936 - f 79 -10.9 -3.86346 | overlap 4876938 TCACTGCCTCACAAA GACCAACGCACCCTTGG GACCA CCTCGGATGCGTTGGAC GTTGCAGTGAAGGCT TERM 3715 4876972 - 4876938 - f 74 -12.1 -3.52113 | overlap 4876936 ACTGCCTCACAAAGA CCAACGCACCCTTGG GACCA CCTCGGATGCGTTGG ACGTTGCAGTGAAGG XOO4574 4876981 - 4877574 + | hypothetical protein TERM 3716 4877679 - 4877649 - f 90 -18.4 -2.84 | opp_overlap 4877674, overlap 4877646 ACGAGCGCAGAATGA CTTCGACATCGCAG ACT CTGCGATGTCGATG CGCTGCCCTGTCGCG btuE 4877952 - 4878569 + | glutathione peroxidase XOO4577 4879970 - 4878594 - | IS1478 transposase XOO4579 4880991 - 4880545 - | transposase XOO4580 4882134 - 4881007 - | hypothetical protein XOO4581 4882769 - 4882098 - | hypothetical protein TERM 3717 4882965 - 4882938 - R 100 -18.6 -3.8901 | opp_overlap 4882944, overlap 4882944 CTGCAAAGCAGCAAA GAAAAACCCCGC CGAA GCGGGGTTTTTC GTCACACAACGCGTG TERM 3718 4882959 - 4882944 - R 100 -11.8 -5.34309 | opp_overlap 4882944, overlap 4882938 AGCAGCAAAGAAAAA CCCCGC CGAA GCGGGG TTTTTCGTCACACAA TERM 3719 4882944 - 4882959 + r 100 -11.8 -4.72272 | opp_overlap 4882944 4882938 AGCAGCAAAGAAAAA CCCCGC CGAA GCGGGG TTTTTCGTCACACAA ompP1 4884360 - 4882990 - | outer membrane protein TERM 3720 4883443 - 4883478 + g 70 -14 -2.55351 | gap 1, overlap 4883442 GTGCGTGAAGCTGGC GGTCGCGCTGGCCGGCA GCT TGACGG-TAGCGCGGCC CTTGGTGTCGACGAA TERM 3721 4884484 - 4884474 - H 73 -8.2 -3.99494 | TTAACCGAACAATAA CGCG TCG CGCG CTGAACGCGCTGTCA TERM 3722 4885143 - 4885161 + G 76 -9.5 -4.19624 | CGGCATGGTGGCGTG GTCGGCG CATAT CGCCGGC TTTGTGTTCGGCATC TERM 3723 4885194 - 4885233 + G 71 -12 -3.28712 | gap 1 GTACGGCTTGTCCGT GCGCGCGGCGATCGCGCGG CGG CTGCGCAAGCGCCACG-GC TTCTGAGGCGCGCAG XOO4583 4884508 - 4885239 + | hypothetical protein TERM 3724 4885312 - 4885342 + F 74 -11.9 -3.44229 | opp_overlap 4885304, overlap 4885314 CACCCAACGCGCGAT GCTGCGCACGTC-GG TGG CCAGGCGTGCGC-GC TTATAATCGTGGCAT XOO4584 4885335 - 4885676 + | hypothetical protein serA 4885676 - 4886668 + | D-3-phosphoglycerate dehydrogenase TERM 3725 4886878 - 4886847 - T 95 -10 -4.63218 | opp_overlap 4886859 GGGCGGCTAAGAAAA CGACTGCGCTCACC GCCA GGCGAGCGTGGCCG GTGCTCGGAATCGGC ctp 4888513 - 4886975 - | carboxyl-terminal protease XOO4587 4890042 - 4888603 - | hypothetical protein TERM 3726 4888867 - 4888840 - GH 76 -8.4 -4.11692 | gap 1 CATCCAGTCGGAAAA CACCACCGT-GCC ATC GGCCACTGCGGTG ACCGTGGTGCCCTTG XOO4588 4889999 - 4890655 + | hypothetical protein XOO4589 4890806 - 4892617 + | hypothetical protein TERM 3727 4892701 - 4892732 + T 83 -15.2 -3.23711 | opp_overlap 4892707, overlap 4892702 4892707 GAGAAACAGCTGTCA TGCAAAGGGCCTCC ACTC GGAGTCCCTTTGCG TTGCTGAGTTATGGC TERM 3728 4892702 - 4892731 + T 79 -16.5 -2.53905 | opp_overlap 4892707, overlap 4892701 4892707 AGAAACAGCTGTCAT GCAAAGGGCCTCC ACTC GGAGTCCCTTTGC GTTGCTGAGTTATGG TERM 3729 4892707 - 4892726 + T 71 -9.2 -3.78597 | opp_overlap 4892707, overlap 4892702 4892701 CAGCTGTCATGCAAA GGGCCTCC ACTC GGAGTCCC TTTGCGTTGCTGAGT XOO4590 4893181 - 4892765 - | hypothetical protein XOO4591 4894676 - 4893294 - | putative ISXo8 transposase XOO4592 4894719 - 4895498 + | IS1478 transposase XOO4593 4895562 - 4895990 + | IS1478 transposase XOO4594 4897210 - 4896026 - | hypothetical protein TERM 3730 4896629 - 4896602 - G 75 -12 -3.55071 | gap 1, overlap 4896603 GGACAGGCTGGCAAA GCTGCGCGGC-TC GGC GATGCCGCGCAGG CCGGCAAGCCAGTCG TERM 3731 4896628 - 4896603 - G 78 -15.5 -2.72829 | gap 1, overlap 4896602 GACAGGCTGGCAAAG CTGCGCGGC-TC GGC GATGCCGCGCAG GCCGGCAAGCCAGTC XOO4595 4900735 - 4897439 - | hypothetical protein TERM 3732 4898165 - 4898153 - G 77 -4.7 -4.62302 | overlap 4898143 4898154 CAACAGCTCGAAAAA GCGCG CTT CGTGC TGCGGCAGGCCATCG XOO4596 4901581 - 4900883 - | hypothetical protein XOO4597 4903037 - 4901565 - | hypothetical protein TERM 3733 4903180 - 4903202 + r 78 -6.3 -4.61633 | gap 2, opp_overlap 4903170, overlap 4903170 GAAACGCGGGGATGA GCCGCTCGAGC TCT GC-CGAG-GGC TTTTTCCAGCTGTCT XOO4599 4904817 - 4903621 - | hypothetical protein TERM 3734 4904109 - 4904134 + g 77 -8.3 -4.25104 | gap 1, opp_overlap 4904112, overlap 4904110 GATTCATCGCCTGCA ACA-CGCGATCG AAA CGATCGCGATGA TTTTCGTACAGGAAA TERM 3735 4904130 - 4904112 - G 79 -14.6 -3.02144 | opp_overlap 4904110 4904109 TCATCGCCTGCAACA CGCGATCG AAA CGATCGCG ATGATTTTCGTACAG TERM 3736 4904478 - 4904456 - G 71 -12 -3.29043 | opp_overlap 4904445 AACGGCGCGCCATAA CTGCCGCGCT TGT AGCGCAACAG TTCGCGCTCAATCTC folE 4905520 - 4904891 - | GTP cyclohydrolase I TERM 3737 4906060 - 4906078 + H 77 -4.4 -4.86621 | overlap 4906063 AGGCGCATGCGCGAT CGCGCTGC TGG GCGGCCTG TTTTTCCTTACCCGT XOO4603 4906683 - 4907291 + | hypothetical protein TERM 3738 4907301 - 4907319 + T 71 -13.8 -2.52464 | opp_overlap 4907296 4907292 CGATAAGGCACGGCT TGCGCGCC ACC GGCGCGCG TGCCTTGGAGCGCCC TERM 3739 4907430 - 4907443 + T 73 -8.1 -3.98661 | GTTTCACTTTGCCGG CGCGT GGCG ACGCG TTTGTCATCGCTGTC kgtP 4908997 - 4907567 - | dicarboxylate transport protein TERM 3740 4908461 - 4908446 - G 76 -2.4 -4.94902 | overlap 4908447 GAACGACGACAAAAA CCCGCG CCGG CCCGGA ATCGCCGCTTCAGAC XOO4605 4909650 - 4909042 - | hypothetical protein TERM 3741 4909134 - 4909174 + g 74 -4.7 -4.56597 | opp_overlap 4909132, overlap 4909135 TGCCCGCAGCCAACA TGTCG-CACGCGGTGGCGA TGCGC TTGAC-CCGCGTGTCGGCG TTTTTGCCGGAAACA TERM 3742 4909547 - 4909511 - G 75 -9.3 -3.96449 | overlap 4909501 4909499 4909512 CAACAGCGCAAACAA CCCGCTCGCACCGGCAG GCG CTGCCGGTTCCAGCAAC GTGGCCTTGAAGCGG TERM 3743 4909546 - 4909512 - G 71 -12.8 -2.97146 | overlap 4909501 4909499 4909511 AACAGCGCAAACAAC CCGCTCGCACCGGCAG GCG CTGCCGGTTCCAGCAA CGTGGCCTTGAAGCG XOO4609 4911088 - 4911384 + | hypothetical protein TERM 3744 4911691 - 4911706 + G 71 -10.4 -3.63991 | overlap 4911697 4911699 CGAACCGTGGATTGC CGCGCT GATC AGCGCG TTGTTGCACGTGCTG TERM 3745 4911970 - 4911943 - g 77 -11.2 -3.74526 | overlap 4911966 GCAGCAAGCCAAGAA CCCGGTGCCGCC GCAG GGCAACACCGCG CCGGGCAGTCTGGCC XOO4610 4911365 - 4912483 + | hypothetical protein XOO4611 4913570 - 4912812 - | IS1478 transposase XOO4612 4914389 - 4913610 - | IS1478 transposase XOO4613 4914699 - 4914797 + | site-specific DNA-methyltransferase XOO4953 4916052 - 4915816 - | hypothetical protein TERM 3746 4916609 - 4916591 - R 95 -10.2 -4.59109 | overlap 4916592 CAGACGTGGCAAAAA GCTGCCCG GAT CGGGCAGG CAGAGCTTGGCGTAT TERM 3747 4916608 - 4916592 - R 77 -13.7 -3.34984 | overlap 4916591 AGACGTGGCAAAAAG CTGCCCG GAT CGGGCAG GCAGAGCTTGGCGTA XOO4614 4917137 - 4916628 - | hypothetical protein XOO4615 4917577 - 4917134 - | hypothetical protein TERM 3748 4917633 - 4917594 - R 72 -12 -3.29829 | gap 1, opp_overlap 4917625 TACAGGCTGCCACAA GCCGCCCGCGCGCGCCATC GGC GAGGGCAT-CGCGGCCGGC ACCGCATTGTGATGC XOO4616 4918562 - 4917876 - | IS1478 transposase TERM 3749 4919294 - 4919273 - R 88 -4.4 -5.36441 | opp_overlap 4919290 GCCGGACACAAAAAA CCCACC AAAACTCGGA GGTGGG TGCCGCTGTGTGTGG XOO4617 4919943 - 4919779 - | hypothetical protein XOO4955 4920202 - 4919996 - | hypothetical protein TERM 3750 4921162 - 4921144 - R 71 -11 -3.53012 | CGCGCGCTGGCCAAA CACCCTGT CCG ACAGGGCG CTTCAGAACCGGGCG glxK 4922383 - 4921214 - | glycerate kinase TERM 3751 4921723 - 4921747 + g 74 -5 -4.56597 | gap 1 GGTTGCTATCGAGCT GGCGC-ACC ATGCCGGG GGTGGCGCC TTTTTGCGGGCCGAA TERM 3752 4922181 - 4922159 - G 79 -5.5 -4.59773 | gap 1 GGTCAGGCCGAAAAA CGC-CTGCAC CGGG GTGCCGAGCG GACCGCTGACGGTGC ttuB 4923887 - 4922409 - | MFS transporter TERM 3753 4923040 - 4923053 + g 82 -5.9 -4.73388 | TCGTCGGCCAGTACG CGGGC CAAG GCCTG TTTTTCCTGCGGGTT XOO4622 4925430 - 4924096 - | dipeptidase TERM 3754 4924854 - 4924891 + g 91 -8.4 -4.72986 | opp_overlap 4924854 CCTGCGCGTAATAGA CGCGCAGCACGGTGG-GG TCGG CCACCAGCGGGCTG-GCG TTTTTCATGCCGATG YXOOp18 4925610 - 4925479 - | hypothetical protein XOO4624 4926036 - 4925632 - | hypothetical protein XOO4625 4927423 - 4926071 - | oxidoreductase TERM 3755 4927417 - 4927393 - G 90 -15.8 -3.61398 | GCCGGTTGCGAACAA GACCTTCGCC GTACA GGCGAAGGTC CGTCACCCGGAATCC TERM 3756 4928264 - 4928282 + G 71 -8 -4.15565 | overlap 4928265 CGATGTTCTTCCTGC TGGCCGGC ATG GCCGACCG TTTTCACCTGCTGCC ygjT 4927501 - 4928457 + | export protein TERM 3757 4928549 - 4928585 + F 93 -8.7 -5.16572 | gap 1, opp_overlap 4928549, overlap 4928549 TGCGGAGGACACAGA GG-GCTGACGGCTGTC TTCTGT GGCAGCCGTGGGCGCC TTTTTTGCCTTGCAT XOO4627 4928832 - 4929617 + | hypothetical protein glpQ 4930889 - 4929747 - | glycerophosphoryl diester phosphodiesterase TERM 3758 4931121 - 4931108 - H 72 -3.8 -4.60041 | ATCCAGCGTCAAAAA CACC TGACGC GGTG CACTGGCATGGAACG TERM 3759 4933855 - 4933875 + G 72 -11.1 -3.53012 | CGCTGGGAGCTGGCC GCGCAGGAC GCA GTGCTGCGC TTTCCGGCCGCAGCC TERM 3760 4934334 - 4934308 - g 75 -4.3 -4.62069 | CCCGCATTCGAAAAA GACCTGGCCGC CGCAC GCCGCGAGATC GAGAAAGCGCAGGCG phoC 4933555 - 4934430 + | phosphatase precursor trmE 4935929 - 4934589 - | tRNA modification GTPase TrmE XOO4635 4938796 - 4936094 - | polysaccharide deacetylase TERM 3761 4936329 - 4936317 - G 75 -3.4 -4.74013 | CGGAAATACACAAAA CCAA GGTTA TTGG CCGCCAGTGCAAAAT TERM 3762 4938362 - 4938346 - G 75 -13.7 -3.03771 | GCAGATCGCGCAATA CCTCGCC AAC GGCGAGG CGGTCGGCATCGGAG TERM 3763 4938846 - 4938865 + r 74 -10.6 -3.69338 | opp_overlap 4938828 4938827 4938847, overlap 4938847 GGCTGACATGCAGAA AGCCCGCC TTGC GGCGGGCC TTCTTCAACTTACTT TERM 3764 4938864 - 4938847 - R 86 -14.1 -3.95073 | opp_overlap 4938846 4938847, overlap 4938828 4938827 GCTGACATGCAGAAA GCCCGCC TTGC GGCGGGC CTTCTTCAACTTACT TERM 3765 4938847 - 4938864 + r 72 -14.1 -2.80879 | opp_overlap 4938828 4938827 4938847, overlap 4938846 GCTGACATGCAGAAA GCCCGCC TTGC GGCGGGC CTTCTTCAACTTACT XOO4636 4940599 - 4938875 - | putative inner membrane protein translocase component YidC TERM 3766 4940045 - 4940087 + g 73 -11.9 -3.33261 | opp_overlap 4940030 GGTGCGACGGATCGA CACGCCGTTGGGGCCATTC CACAC GAACGGCACCACCAGCGTG TTCTGGCCCTTGGCG TERM 3767 4940490 - 4940518 + g 93 -4.3 -5.27335 | opp_overlap 4940466 GGCACCGATTGCGTC GCAGCCGCCACGG GCG CATTGGCAGCCGC TTTTTCTTTGCCCCA rnpA 4941104 - 4940625 - | ribonuclease P TERM 3768 4941012 - 4941053 + g 74 -15.2 -2.53263 | gap 1, opp_overlap 4941017, overlap 4941017 ATATTGCGCACGCGT ACGAACCCGCGCAGAGCGA GGAAA TCGC-CTGCACGGGTTCGA TGCGTTCACGGTAAG TERM 3769 4941048 - 4941017 - G 80 -14.5 -3.15544 | gap 1, opp_overlap 4941012 4941017 GCGCACGCGTACGAA CCCGCGCAGAGCGA GGAAA TCGC-CTGCACGGG TTCGATGCGTTCACG