TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.467109 %AT, 1916966 nt, 16361 terms. Intergenic: 0.53019 %AT, H2T: 380893 nt, 2976 terms; T2T: 127815 nt, 2014 terms; H2H: 144336 nt, 2071 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|28191370|ref|NC_004554.1| Xylella fastidiosa Temecula1 plasmid pXFPD1.3, complete sequence (length 1346) TERM 1 152 - 167 + G 73 -9 -3.83262 | TCTGTTTATTCTTGT GGCAAC TCAG GTTGCC TTGTTCTCCAATTTG PDa0001 68 - 205 + | hypothetical protein TERM 2 194 - 208 + F 74 -8.6 -3.83998 | TTTGCGGACATTCAG TCCTCA CCC TGAGGA TTTAGTGTCAACTGA TERM 3 303 - 255 - f 100 -15.2 -3.75332 | opp_overlap 257 295, overlap 256 ATTTGGGAATTGAAA TCCCCCCCCCGTTTTGTGGGCC GCAGG AGCCAGCAAAACGGGGGGGGTT TTCATCCTCTCTTGA TERM 4 302 - 256 - f 100 -18.7 -2.84878 | opp_overlap 257 295, overlap 255 TTTGGGAATTGAAAT CCCCCCCCCGTTTTGTGGGCC GCAGG AGCCAGCAAAACGGGGGGGGT TTTCATCCTCTCTTG TERM 5 257 - 301 + F 100 -23.7 -4.34947 | opp_overlap 256 255, overlap 295 TTGGGAATTGAAATC CCCCCCCCGTTTTGTGGGC CGCAGGA GCCAGCAAAACGGGGGGGG TTTTCATCCTCTCTT TERM 6 421 - 390 - f 80 -5.8 -5.02074 | gap 1, overlap 393 GCATGCGTTAAAAAA TAACCCCGCGGTGTT ACC AGCACC-CGGGGTCG TGACCAGCTATCGGA TERM 7 418 - 393 - f 93 -9.7 -4.61482 | gap 1, overlap 390 TGCGTTAAAAAATAA CCCCGCGGTGTT ACC AGCACC-CGGGG TCGTGACCAGCTATC TERM 8 936 - 917 - g 71 -10.7 -3.17212 | overlap 920 TCAGTACGTGAGCAA GCACGCC GCCCGA GGCGTGC GCCATTACCAGCGTT PDa0002 444 - 1235 + | replication protein SEQUENCE gi|28197945|ref|NC_004556.1| Xylella fastidiosa Temecula1, complete genome (length 2519802) TERM 1 588 - 600 + G 71 -7.7 -4.02719 | ATGGTGGGACTGGTT TGGGT AAA ACCCA TTTAATGTTTGCTGC TERM 2 758 - 775 + G 79 -2.7 -5.14563 | CAAATTGACGCGCTA TTGATTG ATGA CATTCAA TTTTTTGCTGGAAAA dnaA 146 - 1465 + | chromosomal replication initiation protein dnaN 1747 - 2847 + | DNA polymerase III subunit beta TERM 3 2875 - 2894 + F 100 -10 -5.61596 | opp_overlap 2873 2875 TTTGATAATAAAGTA CGCCTGAT AATA ATCGGGCG TTTTTTTGTGGAACT recF 3153 - 4247 + | recombination protein F PD0004 4501 - 4746 + | hypothetical protein TERM 4 5619 - 5604 - g 72 -2.5 -4.87273 | opp_overlap 5607, overlap 5606 5607 AACATTCCACAAAAA GATGG CGGTAC CCACC TTGCTGGCTTCCGTG TERM 5 7130 - 7142 + G 80 -9.1 -4.15222 | GGGTGATGTGGTAGA GCCAC GCC GTGGC TTTATTGAGAACAAT gyrB 4743 - 7187 + | DNA gyrase subunit B TERM 6 7438 - 7412 - g 73 -10.8 -3.3785 | opp_overlap 7406, overlap 7414 7420 GCAACGCAGGCACAA CAGCGAAACCAG AGG CTGGATTCGCAG TCAGTAGCTATTTTG TERM 7 7436 - 7414 - g 78 -12 -3.25668 | opp_overlap 7406, overlap 7412 7420 AACGCAGGCACAACA GCGAAACCAG AGG CTGGATTCGC AGTCAGTAGCTATTT PD0006 7388 - 8062 + | hypothetical protein PD0007 8127 - 8942 + | hypothetical protein PD0008 9046 - 10239 + | hypothetical protein tonB 10683 - 11348 + | TonB protein exbB 11444 - 12208 + | biopolymer transport ExbB protein exbD1 12265 - 12684 + | biopolymer transport ExbD1 protein exbD2 12691 - 13101 + | biopolymer transport ExbD2 protein TERM 8 13185 - 13169 - f 72 -9.4 -3.65046 | opp_overlap 13169 TGGTCACCCTAAGAA CGCCAC TTTGT GTGGCG TTTTTTTTAATCTGT TERM 9 13169 - 13185 + F 100 -9.4 -5.92337 | opp_overlap 13169 TGGTCACCCTAAGAA CGCCAC TTTGT GTGGCG TTTTTTTTAATCTGT TERM 10 13284 - 13269 - f 70 -4.7 -4.41177 | opp_overlap 13264 13282 CACAGAAATGTAAAA TCAGC GCGCTT GCTGA ATTTATTCATTGATA TERM 11 13651 - 13664 + F 72 -6.7 -4.31043 | opp_overlap 13650 TTGATGGCATTGAAT TCTCG CATG CGAGA TTTTGAGTATTGTCT TERM 12 14378 - 14361 - g 75 -6.3 -4.59773 | gap 1 TGCCACTCCTAAAAA CGATC-CG CTG CGTGATCG GCAGCTAGAGCGTCT PD0013 13819 - 16206 + | dipeptidyl-peptidase PD0014 16261 - 16803 + | hypothetical protein TERM 13 16881 - 16868 - f 79 -8.1 -4.25283 | opp_overlap 16877, overlap 16854 AGCTGTTCACTAAAA CAGCG CCGC CGCTG TACTGCGATGTCATC hemF 17033 - 17950 + | coproporphyrinogen III oxidase PD0017 20838 - 21134 + | hypothetical protein TERM 14 21591 - 21575 - T 88 -7.9 -5.07107 | opp_overlap 21574 21576, overlap 21576 GAAAGCTGGAAAAAA TGCGCGT GAT ACGCGCT GTTATTGGGTTTTTG TERM 15 21590 - 21576 - T 82 -11.4 -3.6318 | opp_overlap 21574 21576, overlap 21575 AAAGCTGGAAAAAAT GCGCGT GAT ACGCGC TGTTATTGGGTTTTT TERM 16 21576 - 21590 + T 82 -11.4 -3.49383 | opp_overlap 21576 21575, overlap 21574 AAAGCTGGAAAAAAT GCGCGT GAT ACGCGC TGTTATTGGGTTTTT aroG 22687 - 21593 - | phospho-2-dehydro-3-deoxyheptonate aldolase TERM 17 22321 - 22287 - G 72 -11.7 -2.64794 | opp_overlap 22284 22283 GGTAAGCCGAGATGA TTG-ATATCGCGCAGCA GGT TGC-GCGCGATATGCAA GCCCTTATTGATCTG TERM 18 22743 - 22763 + H 88 -12.6 -3.55444 | opp_overlap 22743 GGAGACAATAAAAAA GCCGCCAA ACACA TTGGCGGC TTTCGAGGATGCGGG TERM 19 22763 - 22743 - H 100 -12.6 -5.60689 | opp_overlap 22743 GGAGACAATAAAAAA GCCGCCAA ACACA TTGGCGGC TTTCGAGGATGCGGG TERM 20 23387 - 23358 - H 75 -9.5 -3.6502 | opp_overlap 23360, overlap 23360 TATTTTTCATGGAAA TATTTACTCTGAT AGCG ATCAGAGTAAATG TATTGAGGTAACGGG TERM 21 23385 - 23360 - H 82 -12.1 -3.40597 | opp_overlap 23360, overlap 23358 TTTTTCATGGAAATA TTTACTCTGAT AGCG ATCAGAGTAAA TGTATTGAGGTAACG TERM 22 23360 - 23385 + H 78 -12.1 -3.08813 | opp_overlap 23358 23360 TTTTTCATGGAAATA TTTACTCTGAT AGCG ATCAGAGTAAA TGTATTGAGGTAACG fimT 23858 - 24421 + | pre-pilin like leader sequence TERM 23 24463 - 24452 - g 100 -7.2 -5.27477 | opp_overlap 24451 24452 ATCGCAAGCAAAAAA GCCG TTGC CGGC GTTAGTTTGATCGAA pilV 24431 - 24910 + | pre-pilin leader sequence PD0021 24907 - 25857 + | hypothetical protein pilX 25854 - 26441 + | PilX protein TERM 24 28124 - 28107 - g 70 -9.9 -3.38361 | overlap 28111 AAATTCCAATATCAA CCAACCA ATAC TGGTTGG CCGCGAAATATGGCG TERM 25 28835 - 28849 + G 74 -10 -3.73775 | opp_overlap 28834, overlap 28825 GTGGGTGCCAATGAC GGCATG TTG CATGCC TTTGATGCCAATACC TERM 26 29483 - 29501 + G 72 -2.4 -4.86731 | GGGGCCATTGAGCGC TCCACG GGGCGGA TGTGGA TTTTCTTTGGGACAG pilY1 26465 - 30109 + | PilY1 protein TERM 27 30171 - 30154 - g 100 -2.7 -5.95286 | opp_overlap 30164 ATTAAAAACAAAAAA CAAAACG GCTT CACTTTG ATAGAAGTGATGATT pilE 30136 - 30531 + | PilE protein TERM 28 30596 - 30583 - T 71 -9.5 -3.19463 | TCCAGCATTGAGGAA GCGCG GGAG CGCGC ACCGGGGATAACCAA TERM 29 30627 - 30615 - T 71 -7.7 -3.8591 | opp_overlap 30615 GGGGATAACCAAGAA GCACA CGG TGTGC TGGTTCCAGTGCCAT pyrF 31696 - 30962 - | orotidine 5'-phosphate decarboxylase tyrB 32820 - 34022 + | aromatic amino acid aminotransferase TERM 30 34756 - 34799 + T 93 -14.1 -3.48395 | gap 2, opp_overlap 34752 34761 34763, overlap 34761 34762 34763 34798 CGGTATCAGAAGAGA CGCAATAGCACTCCAGGTACC TGAG GGTGCCTGGAGTGC-AT-GTG TTCTGTACAGAACAT TERM 31 34795 - 34761 - T 86 -13.7 -3.20633 | gap 1, opp_overlap 34756 34761 34762 34763, overlap 34752 34763 TCAGAAGAGACGCAA TAGCACTCCAGGTACC TGAG GGTGCCTGGAGTGC-A TGTGTTCTGTACAGA TERM 32 34761 - 34797 + T 93 -14.6 -3.31726 | gap 1, opp_overlap 34761 34752 34763, overlap 34756 34762 34763 TCAGAAGAGACGCAA TA-GCACTCCAGGTACC TGAG GGTGCCTGGAGTGCATG TGTTCTGTACAGAAC TERM 33 34762 - 34795 + T 100 -17.5 -3.22618 | opp_overlap 34761 34752 34763, overlap 34761 34756 34763 CAGAAGAGACGCAAT AGCACTCCAGGTACC TGAG GGTGCCTGGAGTGCA TGTGTTCTGTACAGA TERM 34 34794 - 34763 - T 100 -18.8 -3.15985 | opp_overlap 34762 34761 34756 34763, overlap 34761 34752 AGAAGAGACGCAATA GCACTCCAGGTACC TGAG GGTGCCTGGAGTGC ATGTGTTCTGTACAG TERM 35 34763 - 34794 + T 100 -21 -2.53249 | opp_overlap 34763 34761 34752, overlap 34762 34761 34756 AGAAGAGACGCAATA GCACTCCAGGTACC TGAG GGTGCCTGGAGTGC ATGTGTTCTGTACAG TERM 36 34798 - 34813 + T 78 -6.2 -4.61482 | opp_overlap 34752, overlap 34756 TGCCTGGAGTGCATG TGTTCT GTAC AGAACA TTATTTTTTACAGCG mscL 35310 - 34906 - | large-conductance mechanosensitive channel TERM 37 35453 - 35431 - R 100 -15 -3.14344 | opp_overlap 35417 35434 TATCCGTTGCAGGAA GTATCCTGAG CTG CTCAGGATAC TTCAAGTAGACGCAG TERM 38 35434 - 35450 + r 73 -10.9 -2.73364 | opp_overlap 35431, overlap 35417 CCGTTGCAGGAAGTA TCCTGAG CTG CTCAGGA TACTTCAAGTAGACG PD0028 35991 - 35638 - | hypothetical protein PD0029 36056 - 36262 + | hypothetical protein TERM 39 37026 - 37036 + G 70 -3.2 -4.75219 | GCCGGTTATCTTGCG GGTG ATC CATC TTTTGTTGCTCATTG TERM 40 37074 - 37092 + G 76 -5.2 -4.74161 | overlap 37075 TTGGTTTGCCCATTA TCCGGTGG TGT TCATCGGG TTGTTTTTGTTCTTT PD0030 36277 - 37539 + | hypothetical protein comJ 37722 - 38603 + | transformation competence-related protein TERM 41 38771 - 38749 - f 74 -5.7 -4.57073 | gap 1, opp_overlap 38749 TATGTGTTTGAAAAA TATCGCCCTA AGAA TAGG-CGATA TTTTTTTGTGATTTT TERM 42 38749 - 38771 + F 89 -5.7 -5.77632 | gap 1, opp_overlap 38749 TATGTGTTTGAAAAA TATCGCCCTA AGAA TAGG-CGATA TTTTTTTGTGATTTT PD0032 39197 - 39739 + | hypothetical protein TERM 43 40647 - 40659 + G 80 -4.7 -5.04356 | opp_overlap 40644 40647, overlap 40625 CGTGGTGGGAAACAC GCGAC CGC GACGC TTTTTGATTATTTGA mfd 39807 - 43394 + | transcription-repair coupling factor aroQ 44016 - 44462 + | 3-dehydroquinate dehydratase TERM 44 44820 - 44842 + G 71 -7.7 -3.98172 | overlap 44818 GCACGTTTTATACCT CACCGGC GCCGGATAA GCCGGTG TTTGTGAGTGTTGGT accB 44525 - 45010 + | acetyl-CoA carboxylase biotin carboxyl carrier protein subunit accC 45068 - 46435 + | acetyl-CoA carboxylase biotin carboxylase subunit uvrD 48799 - 46613 - | DNA-dependent helicase II hmpA 50073 - 51266 + | nitric oxide dioxygenase TERM 45 52008 - 52020 + F 83 -4.1 -5.40474 | AAATTGGAACCTCGG CGGAA ACA TTCTG TTTTTTTGAAAAAAT TERM 46 52670 - 52648 - f 82 -2.6 -5.46629 | overlap 52653 AACACTGTAAAAAAA GAGATCTGCA GTT TGCAACGCTC TATAGGCAGTGTTTG TERM 47 53154 - 53164 + G 74 -3.2 -4.89477 | TAGGGAGATAGCAAT GCAT TGG GTGC TTTTATTGTTGGCCA PD0039 53116 - 53427 + | hypothetical protein pdxJ 53424 - 54206 + | pyridoxal phosphate biosynthetic protein PdxJ korB 55774 - 54701 - | transcriptional repressor TERM 48 56471 - 56486 + r 75 -2.6 -5.1101 | ATGCGTGGTACATCA CTTTAA GCGT TTGAAG TTTTTTAGGTGCTGC comF 57601 - 56876 - | competence protein F bioB 57651 - 58676 + | biotin synthase TERM 49 58654 - 58681 + F 77 -7.2 -4.4458 | gap 1 ATGTACATGCTGATA TCGCTTGCAAACA TGT TGTTTG-AAGTGA TTTGTTGTCTATGTA TERM 50 58722 - 58703 - f 100 -11.4 -4.87665 | opp_overlap 58702 58706 58716 GTCTATGTACAAAAA CCCCACCC TATA GGATGGGG CGTCTTATTGGCGAC TERM 51 59100 - 59118 + G 79 -11 -3.70853 | TCGATGTTCATTTTG GGCGACCA TTG TGGTTGCC TTGTTGACTGCTTGC PD0044 59071 - 60111 + | lipoprotein PD0045 60529 - 60771 + | hypothetical protein ubiA 61786 - 60887 - | 4-hydroxybenzoate octaprenyltransferase TERM 52 61985 - 62004 + H 89 -5 -5.79595 | opp_overlap 61985, overlap 62003 CGCCAGTCCATCAAA GCCAAC CCTTTGTT GTTGGC TTTTTTGTTTTCCGA TERM 53 62440 - 62463 + H 85 -6 -5.37593 | overlap 62441 GGCAAGATCGAAAGG TCTGCTGGAG TTCC TTCTAGCAGG TTTTTTGGTTTCCCA TERM 54 62722 - 62754 + H 72 -6.5 -4.29928 | overlap 62743 TATGAATAGATGGAT CCAATATTTTGATGA GTA TTATTAAAATATAGG TTTTAAATCTTCCTT TERM 55 65520 - 65532 + H 74 -3.4 -5.00138 | TTAAAATATTTCGCT TGAC TTCTT GTCA TTTTTACTTTAAATG TERM 56 67734 - 67718 - H 73 -10.9 -2.62616 | opp_overlap 67706 67712 67707 TCAGCTGGTAGAGCA CCTGCTT TGC AAGCAGG GGGTCGTCGGTTCGA TERM 57 68531 - 68519 - H 72 -6.2 -4.2354 | GAAAGGCGAAAAGAA CCCC GGAGA GGGG AGTGAAATAGAACCT TERM 58 71187 - 71218 + H 100 -17.5 -4.61852 | opp_overlap 71191, overlap 71191 AGGGTCTTTTCCCCT CAAACCCTCATCC TTAGTT GGATGAGGGTTTG TTTCTTTGTGCTGTT TERM 59 71214 - 71191 - H 88 -12.5 -3.53012 | opp_overlap 71191 71187 TCTTTTCCCCTCAAA CCCTCATCC TTAGTT GGATGAGGG TTTGTTTCTTTGTGC TERM 60 71191 - 71214 + H 100 -12.5 -4.83246 | opp_overlap 71191, overlap 71187 TCTTTTCCCCTCAAA CCCTCATCC TTAGTT GGATGAGGG TTTGTTTCTTTGTGC mutM 71282 - 72097 + | formamidopyrimidine-DNA glycosylase PD0054 73076 - 72234 - | hypothetical protein TERM 61 73518 - 73506 - g 70 -3.3 -4.7254 | AGGGCGCAGGAAAAA CCAGC ATG GTTGG TAAGCTGGCTAAGTA ffh 73166 - 74533 + | signal recognition particle protein PD0056 74857 - 75228 + | hypothetical protein PD0057 75271 - 76068 + | hypothetical protein mrkD 77360 - 76380 - | fimbrial adhesin precursor TERM 62 77355 - 77377 + g 73 -6.3 -4.42748 | AACGTGAGGTGCGAT TAGCATCGT TAGGC ACGCTGCTA TTATTTTTAAAGTCC fimD 81555 - 79042 - | outer membrane usher protein precursor PD0061 82574 - 81774 - | chaperone protein precursor TERM 63 82602 - 82638 + r 72 -9.4 -3.48153 | gap 1, overlap 82603 AAGTGCAGGGCAGGA TGACGCAC-GGAGCGAC GTAC GTCACCCCAGTGCGTCG TTATCGATTATTGGT TERM 64 82603 - 82637 + r 71 -10.7 -2.68169 | gap 1, overlap 82602 AGTGCAGGGCAGGAT GACGCAC-GGAGCGAC GTAC GTCACCCCAGTGCGTC GTTATCGATTATTGG PD0062 83200 - 82646 - | fimbrial subunit precursor TERM 65 84701 - 84718 + r 72 -2.6 -4.99638 | opp_overlap 84700 84703, overlap 84703 ATACGAGGTATCAAC GACCCG AGGTGC CGGGTA TTTTTCTATGGATCT PD0063 85296 - 84808 - | hypothetical protein kgtP 86683 - 85376 - | alpha-ketoglutarate permease symporter TERM 66 86324 - 86312 - G 78 -2.6 -5.15167 | GAGTAGTAATAAAAA CGCC GCCCA GGCA CCGATCATATGATGG TERM 67 86587 - 86573 - G 81 -8.6 -4.2349 | opp_overlap 86573 TGCGTAGACGTAAAA GTCGAA CCA TTCGAC TAAGTTGCCGGAGGA PD0065 88084 - 86732 - | GTP-binding protein hfq 88377 - 88099 - | RNA-binding protein Hfq TERM 68 88406 - 88417 + r 82 -7.2 -4.73614 | ATTTTTATTATTACT CCGG TCAG CCGG TTTGTTTTCCTAATC miaA 89434 - 88481 - | tRNA delta(2)-isopentenylpyrophosphate transferase folP 90330 - 89434 - | dihydropteroate synthase TERM 69 90606 - 90581 - g 76 -10.3 -3.76232 | opp_overlap 90581 GTTTCAAAGACACAA CCGGCCCAGGA TGAC TCTAGGGCCGG TGTATATGACGGTGC TERM 70 90581 - 90606 + G 79 -12.5 -2.99471 | opp_overlap 90581 GTTTCAAAGACACAA CCGGCCCAGGA TGAC TCTAGGGCCGG TGTATATGACGGTGC PD0069 90431 - 90637 + | hypothetical protein hflB 92576 - 90639 - | cell division protein TERM 71 91325 - 91363 + g 71 -6 -4.36914 | overlap 91327 GGGTTTTTTCTTCCT CACTCATTGCCATTGAGC GAC GTTCAGTGCCCATGAGTA TTTTGTCGCGGGCAG TERM 72 91327 - 91361 + g 71 -8.6 -3.79419 | overlap 91325 GTTTTTTCTTCCTCA CTCATTGCCATTGAGC GAC GTTCAGTGCCCATGAG TATTTTGTCGCGGGC TERM 73 91800 - 91812 + g 86 -7.7 -4.7629 | opp_overlap 91800 91799 GTCGATGAAAATAAT GCATG GGG CATGC TTTTTGGCTTGCTCA ftsJ 93264 - 92623 - | cell division protein TERM 74 92707 - 92721 + g 90 -4.2 -5.29782 | overlap 92708 GCGGGAAGCAAGTGG TTTGCG GAT CGCAAC TTTTTTATACCTGTG PD0072 93334 - 93639 + | hypothetical protein PD0073 93658 - 94038 + | hypothetical protein TERM 75 94061 - 94043 - T 82 -11.8 -3.34895 | GCGAGCGGTAACCAA GGTAAGCA GAG TGCTTACC AAGAAAATCATCATT ilvD 96454 - 94622 - | dihydroxy-acid dehydratase TERM 76 95639 - 95660 + g 80 -8.7 -4.07568 | AGTCGAGCCGCCCAT CGCGATATC TAGG GTTATCGCG TTTTCGAACGCAGCA PD0075 97444 - 97641 + | hypothetical protein PD0076 97642 - 98772 + | glycosyl transferase TERM 77 98952 - 98984 + G 70 -3.4 -4.731 | gap 1, overlap 98968 GTGGTGGTACCCAGT TGCTTGATAGT-CCC GCCT GGGCACTGACCAGCA TTTTATTCATGGCTT TERM 78 99296 - 99311 + G 71 -4.6 -4.58395 | overlap 99298 CAGATGATGTTAGCC GACCGC CTGA GCGGTA TTTTTGGCCCATGCA TERM 79 99348 - 99364 + G 70 -6.5 -4.1043 | opp_overlap 99335 AACTTGGCCAAACTT TGGCAAC GCT GTCGCCA TTTGTGCTGTTTGCA PD0077 98753 - 100084 + | membrane protein TERM 80 100092 - 100080 - T 72 -4.8 -4.71426 | GTGCCATTAAGAAAA CCTG AGTAG CAGG CTGATTATGCTCAAT htrB 101193 - 100273 - | lipid A biosynthesis lauroyl acyltransferase TERM 81 101839 - 101865 + G 70 -3 -4.71061 | gap 1 GTGGTGTGTGTGGCG GCGCAATCGCA AGAGGA TGC-ACTGCGC TTTTTGCGTCTGGGT kdtA 101272 - 102582 + | 3-deoxy-D-manno-octulosonic-acid transferase TERM 82 103616 - 103628 + G 70 -9.1 -3.67112 | TAATACGATGGTTTT TGCCG ACA CGGCA TTATTCAAATATGGT PD0080 102966 - 104348 + | hypothetical protein rpsP 104564 - 104824 + | 30S ribosomal protein S16 rimM 104868 - 105380 + | 16S rRNA-processing protein trmD 105490 - 106275 + | tRNA (guanine-N(1)-)-methyltransferase rplS 106440 - 106850 + | 50S ribosomal protein L19 map 107274 - 108053 + | methionine aminopeptidase dapD 108793 - 109626 + | 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase PD0087 109641 - 109997 + | hypothetical protein TERM 83 110028 - 110056 + F 88 -3.9 -5.64006 | overlap 110029 GGTGGTTATGTGCTG CTTTCTCTTGAGT AAT ACTTAAGAGGGAA TTTTTTTGATTCAGT TERM 84 110029 - 110055 + F 71 -7.4 -3.96777 | overlap 110028 GTGGTTATGTGCTGC TTTCTCTTGAGT AAT ACTTAAGAGGGA ATTTTTTTGATTCAG dapE 110153 - 111286 + | succinyl-diaminopimelate desuccinylase asnB 111688 - 113379 + | asparagine synthetase B PD0090 114465 - 113437 - | hypothetical protein PD0091 115511 - 116542 + | hypothetical protein TERM 85 116628 - 116651 + F 70 -2.4 -4.93296 | gap 1 TATGACGGAGGCATT CGCTGAT-GTG CCA CGTTATCGGCG TTTTTCTGCTGATCC lexA 117015 - 117650 + | LexA repressor recA 117832 - 118875 + | recombinase A TERM 86 119325 - 119349 + F 72 -10.7 -2.76171 | opp_overlap 119311, overlap 119321 ATCCTCATTCCGTGA GGTTGGCGC GTTTACA GCGCCAGCC TACTGTTAACTCCAT TERM 87 121077 - 121062 - g 70 -3.3 -4.8048 | TTGCCAGACGAAAAA TGGTT GCTCTT AACCA TTCAGCCACTCACCT TERM 88 121097 - 121115 + G 74 -10.2 -3.48024 | overlap 121095 GCCACTCACCTGTTG CACTGCGC GCT GCGCAGCG TGTTTGGTACTCACG TERM 89 121389 - 121416 + G 83 -8.4 -4.44448 | AACTCTGCGGTGGTA CCCATATCACCC GTAC GGGTGACATTGG TTTGTTTAAGATCAT alaS 119363 - 122017 + | alanyl-tRNA synthetase csrA 122156 - 122371 + | carbon storage regulator prlC 125510 - 123486 - | oligopeptidase A cysK 126676 - 125570 - | cysteine synthase PD0099 127195 - 127572 + | hypothetical protein TERM 90 128293 - 128279 - g 84 -2.8 -5.42259 | GCAGGCTCAAAAAAA TGTCCT CTT ACGACA ACACCTACCAACGCA copA 127660 - 129492 + | copper resistance protein A precursor TERM 91 130022 - 130062 + G 87 -13.2 -3.25823 | gap 1 TGCTCTCATTGGCGC GCGCCG-CGATGTGCAGCC GGAT GGCCGCACCTGGGCGGCGC TTGGTGTGCAGGGCG copB 129489 - 130418 + | copper resistance protein B precursor TERM 92 130482 - 130521 + T 80 -12.3 -3.05384 | gap 1, overlap 130484 CGTGATGGATTGCAT G-ATCCAGGGTTCCCATC TCAAC GGTGTGAACCCTGGATGC TTGAATGGGCAGAAC TERM 93 130484 - 130518 + T 90 -15.1 -2.75064 | overlap 130482 TGATGGATTGCATGA TCCAGGGTTCCCATC TCAAC GGTGTGAACCCTGGA TGCTTGAATGGGCAG TERM 94 130569 - 130588 + T 83 -13.6 -2.71144 | overlap 130571 TTAGGAGTTGTTTTA GAGCGGGA GATT TCCCGCTC TGCTTAAAGCGCATC TERM 95 130571 - 130586 + T 72 -10.4 -2.90075 | overlap 130569 AGGAGTTGTTTTAGA GCGGGA GATT TCCCGC TCTGCTTAAAGCGCA valS 133659 - 130675 - | valyl-tRNA synthetase PD0103 133906 - 133712 - | hypothetical protein holC 134394 - 133969 - | DNA polymerase III subunit chi PD0105 134861 - 134394 - | hypothetical protein TERM 96 134813 - 134779 - G 85 -9.3 -4.46212 | overlap 134781 134783 CGTTTCACGATAAAA GTTAGGAGAAGTCCC AATAA GGGACTTCCCATACC GTAAATATGCATCCA pepA 136315 - 134840 - | leucyl aminopeptidase TERM 97 135012 - 134978 - G 76 -9.8 -3.8062 | opp_overlap 134982 134983 135003 GAAGCGCGATAAGAA GCAGCCGGCGGTGATG GCG CCTCCCCAGCGGCCGC CGATGTTGTAGACGT TERM 98 135845 - 135859 + g 91 -7.8 -5.03715 | overlap 135810 135809 CGCCAGGGTGATGAG GCCGGA TTC TTCGGC TTTTTTGCGGCTGGT PD0107 136425 - 137510 + | hypothetical protein TERM 99 137783 - 137812 + GT 95 -14.3 -3.16475 | gap 1, opp_overlap 137778 TCCGAGTTAACGGCG CTGCGTGCGCTGGG GGT CTC-GCGCACGCGG TTGAGTCTGTCGGTG PD0109 139085 - 138531 - | hypothetical protein PD0108 137507 - 138613 + | hypothetical protein TERM 100 139454 - 139470 + FH 83 -4.3 -5.28176 | CGAGGTGATGTTGTG GTGAGCA GGT TGCGCGC TTTTTTGTAGGTCGC glmS 139554 - 141383 + | D-fructose-6-phosphate amidotransferase PD0111 141657 - 142808 + | hypothetical protein speE 143969 - 143112 - | spermidine synthase speA 144191 - 146077 + | arginine decarboxylase ydfG 146865 - 146050 - | oxidoreductase TERM 101 147004 - 147037 + r 100 -9.7 -5.97575 | overlap 147006 TGTGATTAATGGGTT TTGATGGTGATGGCT TGCA AGCCGTTACTATCGA TTTTTTTTCTGGCTT TERM 102 147006 - 147035 + r 70 -10.1 -3.08036 | overlap 147004 TGATTAATGGGTTTT GATGGTGATGGCT TGCA AGCCGTTACTATC GATTTTTTTTCTGGC PD0115 147740 - 146994 - | hypothetical protein argS 149468 - 147780 - | arginyl-tRNA synthetase TERM 103 148772 - 148782 + g 70 -3.2 -4.78107 | overlap 148743 GGTGGATTGCTGCTG TGTC GTC GACG TTTTTGGTGCTGGTG TERM 104 149110 - 149142 + g 71 -9.8 -3.56837 | overlap 149103 TCCACTCCGACGGTG CGACTTTGGCCGGA CAGGT TCCGACCGTAGTCG TTATCCTGTTTAAGC radC 150269 - 149595 - | DNA repair protein RadC dfp 150367 - 151596 + | bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase dut 151593 - 152060 + | deoxyuridine 5'-triphosphate nucleotidohydrolase TERM 105 153186 - 153156 - f 74 -5.4 -4.67123 | overlap 153165 GGAAAACAAGGAAAA CAAGGAAAACAACG TTG CGTTGTCGTCGTCG CTGCATCTTCAGTTC TERM 106 153177 - 153165 - f 82 -7.7 -4.67123 | overlap 153156 GGAAAACAAGGAAAA CAACG TTG CGTTG TCGTCGTCGCTGCAT algC 153214 - 154608 + | phosphomannomutase TERM 107 154635 - 154658 + T 91 -11 -4.21462 | overlap 154638 TTTATGGTTCCGCGA GTGGTGAGGC ATTT GCCTCACTGC TTTTCAATGCTCGGT TERM 108 154638 - 154655 + T 77 -11.3 -3.11922 | overlap 154635 ATGGTTCCGCGAGTG GTGAGGC ATTT GCCTCAC TGCTTTTCAATGCTC PD0121 155193 - 154621 - | hypothetical protein pyrE 155983 - 155324 - | orotate phosphoribosyltransferase PD0123 156702 - 156184 - | hypothetical protein TERM 109 156344 - 156359 + g 91 -4 -5.61596 | overlap 156345 AAAGGTTGTATCGGT TTACTG ATGT CAGTAG TTTTTTTGTGAGCAT TERM 110 156543 - 156558 + g 79 -3.2 -5.24129 | GGTTTCCACCTCCAT CATGAC AATG GTCCTG TTTTTTGTGGAAAGG PD0124 156746 - 157633 + | hypothetical protein PD0125 158710 - 157895 - | cysteine protease TERM 111 158658 - 158680 + g 100 -2.1 -6.32976 | gap 1, opp_overlap 158652 158647 158640 158639, overlap 158650 158660 158662 CGAATATCAGCTATA TCTGGGATAT AGCC ATATCCT-GA TTTTTTTCTTTTTTT PD0126 160199 - 161158 + | hypothetical protein TERM 112 161250 - 161276 + F 80 -9.5 -3.86015 | opp_overlap 161250, overlap 161253 161255 CGTGCTTTGGCTAAA CAACGCATTGC GGGCG GCGATGTGTTG TTTCTGCCGGCACTG PD0127 161350 - 163158 + | hypothetical protein TERM 113 163476 - 163500 + F 82 -2.9 -5.49579 | overlap 163478 TTGTAACGTTGTAAT GATTTTCTATC AGT GATGGGAAATG TTTTGTTTTTTCTGG TERM 114 163687 - 163699 + F 83 -4.1 -5.41143 | TTTTTTATGATTCTG GAATG GGA CGTTC TTTTTTTGCAGAGTC TERM 115 164009 - 164021 + G 91 -4.1 -5.66868 | ATGGGTTGCGATCGG CTCTT AGT AAGGG TTTTTTTGATTGGTT exoA 163969 - 164769 + | exodeoxyribonuclease TERM 116 166098 - 166116 + G 89 -13.2 -3.64236 | overlap 166111 AATGTTCGATTTTCT GCAACGCA CTA TGCGTTGC TTTCAGCGTTTGCGT ampG 164766 - 166295 + | beta-lactamase induction signal transducer protein anmK 167601 - 166456 - | anhydro-N-acetylmuramic acid kinase PD0131 169080 - 167665 - | metallopeptidase TERM 117 169432 - 169481 + G 76 -2.8 -4.99861 | overlap 169466 GCATTTGGGGCATAC CGTCTTGCTGAACAAGATGCGG CAATTT CAGGATCTTGGTCACCAAGTTG TTTTTCTGATTGGTG TERM 118 169466 - 169478 + G 83 -7.7 -4.58563 | overlap 169432 CGGCAATTTCAGGAT CTTGG TCA CCAAG TTGTTTTTCTGATTG tyrS 169277 - 170533 + | tyrosyl-tRNA synthetase TERM 119 170691 - 170669 - f 88 -3.5 -5.70761 | opp_overlap 170669 170664 AAAACAAAACAAAAA CATGATAAT AATAA ATTCTCATG TTTTCTACATTATGA TERM 120 172817 - 172801 - f 73 -10.9 -2.62616 | opp_overlap 172789 172795 172790 TCAGCTGGTAGAGCA CCTGCTT TGC AAGCAGG GGGTCGTCGGTTCGA TERM 121 173614 - 173602 - f 72 -6.2 -4.2354 | GAAAGGCGAAAAGAA CCCC GGAGA GGGG AGTGAAATAGAACCT TERM 122 176270 - 176301 + F 100 -17.5 -4.61852 | opp_overlap 176274, overlap 176274 AGGGTCTTTTCCCCT CAAACCCTCATCC TTAGTT GGATGAGGGTTTG TTTCTTTGTGCTGTT TERM 123 176297 - 176274 - f 88 -12.5 -3.53012 | opp_overlap 176274 176270 TCTTTTCCCCTCAAA CCCTCATCC TTAGTT GGATGAGGG TTTGTTTCTTTGTGC TERM 124 176274 - 176297 + F 100 -12.5 -4.83246 | opp_overlap 176274, overlap 176270 TCTTTTCCCCTCAAA CCCTCATCC TTAGTT GGATGAGGG TTTGTTTCTTTGTGC mutM 176365 - 177180 + | formamidopyrimidine-DNA glycosylase PD0139 178159 - 177317 - | hypothetical protein TERM 125 179303 - 179256 - g 86 -10 -4.27584 | opp_overlap 179256 179255 AGTGTTAATGGAAAA GGTTATTCCGCAGTTGGATT CTATTATC AAGCCAACTGCGGAAGAAAC GTTGTTCTGGGTGCC PD0140 178606 - 180513 + | hypothetical protein fabG 181667 - 180912 - | 3-ketoacyl-(acyl-carrier-protein) reductase TERM 126 182986 - 183001 + G 79 -3.2 -5.14563 | overlap 182987 182988 TGAATAACTTTGGTG TGCAGC CACT GCTGGA TTTTTTCGTCGAACA TERM 127 183567 - 183577 + G 70 -6.8 -4.08767 | AAAAACGAGTATGGG GTGG ATG CCAC TTTTGAACCAGTCAG prfC 182199 - 183803 + | peptide chain release factor 3 TERM 128 183779 - 183795 + F 78 -12.3 -2.62311 | overlap 183777 183776 183773 183772 CGCTACGCGCGAGCA CGCCTAC GCT GTAGGCG TCGATTGATTGTGAT PD0143 183886 - 184530 + | hemolysin III protein PD0144 185768 - 184755 - | glycosyl transferase yjjV 186821 - 186039 - | deoxyribonuclease PD0146 187169 - 187942 + | outer membrane protein TERM 129 188535 - 188565 + F 86 -2.7 -5.77571 | gap 2, overlap 188543 ATCCCTGGATAGGAT TCCTT--GGGCAGAG TTT CTCTGTTCGTAAGGA TTTTTATTTTTTAGT TERM 130 188742 - 188707 - f 100 -10.4 -5.50313 | overlap 188708 GATAAAAGGAAAAAA GCCCCCTTCCCGATGG GAGT CGATCAGGAAGAGGGA CAGATAAACTAAGAT TERM 131 188741 - 188708 - f 100 -13.9 -3.87748 | overlap 188707 ATAAAAGGAAAAAAG CCCCCTTCCCGATGG GAGT CGATCAGGAAGAGGG ACAGATAAACTAAGA TERM 132 188892 - 188911 + G 85 -4.3 -5.16237 | TTTGAGGGTTTTTTA GCGATAG TTTTCT TTATCGC TTTTTTGGTCACCTT PD0147 188763 - 189242 + | hypothetical protein TERM 133 189696 - 189682 - T 79 -2.8 -5.40464 | opp_overlap 189682 189683, overlap 189676 189683 CATTAGAAAGAAAAA GGCTTT TTT AAAGCA TTTTTTCTGCATGGT TERM 134 189682 - 189696 + T 79 -2.8 -5.28778 | opp_overlap 189682 189676 189683, overlap 189683 CATTAGAAAGAAAAA GGCTTT TTT AAAGCA TTTTTTCTGCATGGT TERM 135 189720 - 189747 + T 77 -12 -2.91264 | GCATGGTTTGGATCT TGCAGCTATGGC TGAG GCCAGAGCTGCG TGTGTGAATCACGCC TERM 136 189862 - 189848 - T 72 -2.8 -5.03747 | opp_overlap 189859, overlap 189850 AAATTGCGCAAAAAA TTTCCA CGT TGGAGA CCCTCAGCAGCGTAC TERM 137 189958 - 189993 + T 74 -11.3 -2.83164 | GCGGTGTGATTGGTT TACATCGCTGCGTAT GCGGTG ATATGCAGCGATGCA TATGGTGGTCAGTAA TERM 138 190056 - 190085 + T 81 -12.3 -3.22789 | overlap 190052 190064 CAACTTCTCCTGTGG GTGCTCATTGAAG TGAG CTTCAATGAGCAG TTGACTTCATCTGAT gcvH 190976 - 190581 - | glycine cleavage system protein H TERM 139 191433 - 191412 - R 71 -10.1 -3.12353 | overlap 191410 191408 ATATCAATATACAGA GGCTGCTGG TGCA CCAGCAGCA CGAGTGGCAATGAGC gcvT 192613 - 191507 - | glycine cleavage system aminomethyltransferase T PD0150 193199 - 192765 - | hypothetical protein PD0151 194180 - 193200 - | inner membrane protein TERM 140 193604 - 193618 + g 87 -2.1 -5.64873 | GGATGGTTGCACGCC TGGTT TGTTC AGCCA TTTTTTGTTGTTGCA mazG 195324 - 194491 - | nucleoside triphosphate pyrophosphohydrolase TERM 141 194569 - 194594 + g 76 -3.2 -5.08824 | gap 1, overlap 194571 GAGTGACATTTGTGC CAGCGTAGCGC CTGCA GC-CTGCGCGG TTTTTTCCATGGCGC TERM 142 194848 - 194834 - G 79 -12.8 -2.90496 | opp_overlap 194841, overlap 194831 GCTTGCTTGAAACCA GCGCGC GTG GCGCGC TCCTGCAACTTGAGG cysQ 196158 - 195358 - | sulfite synthesis pathway protein nudE 196712 - 196155 - | ADP-ribose diphosphatase NudE TERM 143 197097 - 197127 + G 75 -12.6 -2.58427 | gap 1, overlap 197096 CCGAGGCCTTGTTGC GGCTCGCGCCGCG CCAGGA CG-GGCGTGAGCC CTTGTCAAAGGTGTT bioA 196742 - 198202 + | adenosylmethionine--8-amino-7-oxononanoate transaminase PD0156 198193 - 198927 + | hypothetical protein rhlE 200530 - 201870 + | ATP-dependent RNA helicase TERM 144 201894 - 201929 + F 70 -4.8 -4.43477 | gap 1, opp_overlap 201896 201898 201901 201903, overlap 201896 201901 TTACATATTGGTAAT CACAGCA-GAGCATAGT GCC GCTATGCTCTTACTGTA TTTTCGTTGCATGAC TERM 145 201901 - 201921 + F 77 -10.5 -3.46906 | opp_overlap 201898 201896 201901 201903, overlap 201896 201894 TTGGTAATCACAGCA GAGCATAGT GCC GCTATGCTC TTACTGTATTTTCGT TERM 146 202022 - 202039 + G 74 -7.7 -4.21933 | overlap 202013 202011 202010 TCCTGGGCACAAGTG TGCTCGT TTGC ACGGGCA TTCTTTTCGAATTGA ygcM 201951 - 202307 + | 6-pyruvoyl tetrahydrobiopterin synthase PD0159 203910 - 203386 - | hypothetical protein PD0160 204408 - 205070 + | hypothetical protein TERM 147 205205 - 205215 + T 72 -2.6 -4.93079 | TCTGGATCGGTTTAT TTTA TTT TAAA TTTCTTTGTTTTCTT PD0161 206376 - 205669 - | hypothetical protein PD0162 207266 - 206667 - | hypothetical protein PD0163 207331 - 207783 + | hypothetical protein TERM 148 207922 - 207955 + T 79 -11 -3.40403 | opp_overlap 207919, overlap 207925 GATGCTATTTAAGTC TCTTTGAGCCGCTC AGTACG GGGCGGCTCAATGG TTCTCGTAGGCCCCA TERM 149 207925 - 207952 + T 82 -13.5 -2.86271 | opp_overlap 207919, overlap 207922 GCTATTTAAGTCTCT TTGAGCCGCTC AGTACG GGGCGGCTCAA TGGTTCTCGTAGGCC accA 208908 - 207949 - | acetyl-CoA carboxylase carboxyltransferase subunit alpha TERM 150 208956 - 208974 + r 79 -9.6 -3.66058 | opp_overlap 208953 TAGCGGAATAACGTT GCAATCCG CTG TGGATTGC TTCTGTGTGTGCTCT dnaE 212584 - 209003 - | DNA polymerase III subunit alpha TERM 151 210874 - 210890 + g 72 -2.2 -4.87786 | CGAATTTCACTAAGC CGACTT CTTCC ACGTCG TTTTTGTCGAATTGG TERM 152 211228 - 211213 - G 71 -10.4 -3.20617 | overlap 211211 ATGGGAAACCCAATA CGCGAC CGAC GTCGCG CACCACTGCTTTCGC hemH 213799 - 212873 - | phosphoribosylaminoimidazole-succinocarboxamide synthase PD0167 214288 - 214665 + | DnaJ related chaperone rpe 214710 - 215381 + | ribulose-phosphate 3-epimerase PD0169 216051 - 215740 - | hypothetical protein trpE 216280 - 217755 + | anthranilate synthase component I trpD 217913 - 218497 + | anthranilate synthase component II TERM 153 218598 - 218587 - g 83 -7.2 -4.58663 | ATGACTGCTCAAAAA GCGC TACA GCGC ATCGTCGAACACCGC trpD 218566 - 219600 + | anthranilate phosphoribosyltransferase trpC 219679 - 220473 + | indole-3-glycerol-phosphate synthase PD0174 220470 - 221192 + | hypothetical protein prsX 222185 - 222691 + | MarR family transcriptional regulator TERM 154 223129 - 223150 + F 79 -8.7 -4.26903 | opp_overlap 223129 GCGTATCAACAGAAA CGCCTATGG GAGG CCATAAGCG TTTTGGTCGCGTGGA TERM 155 223150 - 223129 - f 91 -10.9 -4.23674 | opp_overlap 223129 GCGTATCAACAGAAA CGCCTATGG GAGG CCATAAGCG TTTTGGTCGCGTGGA pepQ 224599 - 225807 + | proline dipeptidase PD0178 225981 - 227822 + | hypothetical protein PD0179 227861 - 229615 + | hypothetical protein tgt 230067 - 231200 + | queuine tRNA-ribosyltransferase yajC 231350 - 231694 + | preprotein translocase subunit YajC secD 231740 - 233605 + | preprotein translocase subunit SecD secF 233625 - 234590 + | preprotein translocase subunit SecF TERM 156 235000 - 235014 + G 74 -7.1 -4.31412 | GCGGGTGTTGTACCG CCTGC GTGAG GCAGG TTTTGGTGCGTATTT TERM 157 235538 - 235560 + G 70 -5.4 -4.41616 | overlap 235539 235540 CGTATGGCTGGATTG TTGGCTGACG TGG CGCCAGCCCG TTTGTTTGAGGAAGT TERM 158 235899 - 235918 + G 74 -2.7 -4.87803 | TGCATCATCTTGAGC GTGTCGC TTTGCC GCGCCGC TTTTCTTTGCCGATG pcnB 234920 - 236104 + | polynucleotide adenyltransferase folK 236206 - 236703 + | 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase TERM 159 237481 - 237493 + G 73 -10.5 -3.31263 | GGGGATCGGTTGCTG GCGCG GTT CGCGC TTATGCGAATGCGGT panB 236736 - 237554 + | 3-methyl-2-oxobutanoate hydroxymethyltransferase panC 237551 - 238396 + | pantoate--beta-alanine ligase panD 238479 - 238859 + | aspartate alpha-decarboxylase pgi 238863 - 240371 + | glucose-6-phosphate isomerase TERM 160 242038 - 242065 + F 83 -6.3 -5.00895 | gap 1, overlap 242039 242044 TATGTCGGATTTTTG T-GCAATGGGCC CGAGT GGCCCTTTGCTA TTTTTGTATCATCAG TERM 161 242039 - 242063 + F 89 -11.4 -4.12748 | overlap 242038 242044 ATGTCGGATTTTTGT GCAATGGGCC CGAGT GGCCCTTTGC TATTTTTGTATCATC TERM 162 242044 - 242058 + F 76 -8.5 -4.16158 | overlap 242039 242038 GGATTTTTGTGCAAT GGGCC CGAGT GGCCC TTTGCTATTTTTGTA TERM 163 242081 - 242094 + F 72 -5.3 -4.56597 | TTTTTGTATCATCAG TGATG TGTG CATCA TTTTTCAGCAGGACG PD0192 242087 - 242737 + | hypothetical protein TERM 164 243342 - 243354 + G 71 -7.7 -3.97834 | GCTCTTCATTAGTCG CTCTG CTC CAGAG TTTATGATCGAATTG nusA 242734 - 244245 + | transcription elongation factor NusA infB 244341 - 247019 + | translation initiation factor IF-2 rbfA 247129 - 247506 + | ribosome-binding factor A TERM 165 247537 - 247508 - f 72 -9.4 -3.55801 | opp_overlap 247506 247501 247508, overlap 247532 ATGAATCTGGTTAAA CCTTGTATTGGT GAAATA ACCAATTCAAGG TGTTGATCCTTTGTC TERM 166 248068 - 248080 + G 91 -4.1 -5.47218 | GAGGTTGAGGTGCAT GCGAT CGA ATTGC TTTTTTTGGCTACGC truB 247597 - 248505 + | tRNA pseudouridine synthase B rpsO 248684 - 248944 + | 30S ribosomal protein S15 TERM 167 249757 - 249736 - g 70 -3 -4.81249 | CGCGAAATGCAAAAA GTGATTCA GGTGAT TGATTCAC TGACCGCAGAAGCTT TERM 168 249885 - 249908 + G 84 -13.2 -3.0497 | gap 1, opp_overlap 249883 249882 TATCAGAGACAAGTT GCAGCG-TCGC GAC GCGATCGCTGC TGTTAAAGATGATGT pnp 249040 - 251199 + | polynucleotide phosphorylase/polyadenylase PD0199 251769 - 251341 - | hypothetical protein PD0200 251884 - 252765 + | hypothetical protein TERM 169 254008 - 253982 - T 77 -11.6 -2.9294 | CATATCAGCCAGACA CGTGACCAGCAA CAG CTGCCAGTCACG CGCGTTATGATGACT TERM 170 254037 - 254052 + T 72 -3.2 -4.96501 | CTGACACGTTCACCC CGATGT TTCC ACAACG TTTCTTTTTCTAAAG yerP 257114 - 254031 - | acriflavin resistance protein mexC 258220 - 257111 - | membrane fusion protein TERM 171 257508 - 257491 - G 71 -11.3 -2.88579 | opp_overlap 257488 257485, overlap 257493 CCAAGCGTGGAGACA CACTGCG CAGG CGCAGTG AGATGCTTGCTTGCG TERM 172 259116 - 259141 + r 72 -8.3 -3.81926 | overlap 259117 TCACGACCAGTAGGA TCTACGTGTGT AGCA GCACACGTAGC TTGGTTTTTAGACTG TERM 173 259117 - 259140 + r 77 -11.8 -2.88433 | overlap 259116 CACGACCAGTAGGAT CTACGTGTGT AGCA GCACACGTAG CTTGGTTTTTAGACT PD0203 260011 - 259523 - | hypothetical protein TERM 174 259654 - 259672 + g 90 -10.2 -4.258 | GCGGTTTTTGAGCAT GGCAGCCG TTG CGGCTGAC TTTGTTGGTGGATGC PD0204 260045 - 260959 + | hypothetical protein deaD 263142 - 261295 - | ATP-dependent RNA helicase TERM 175 261412 - 261428 + g 80 -8.7 -4.09215 | TGCGGTTGTTTCGGT TGTGTCG ATC CGACGCA TTTGTAGTTGCTGTC TERM 176 261566 - 261587 + g 76 -12.3 -3.1085 | opp_overlap 261563 CTCTCTAATCCAGCT TCGTTGGCG ATAG CGCCGACGA TATTGGCTGGCTTCA TERM 177 263022 - 263045 + g 74 -3 -4.84017 | overlap 263009 263024 TGGTCGCCGCCTGGA TGGGCGACGG AGTT TCGTAGCCGA TTTTTGTGACGGCTT etfA 264390 - 263440 - | electron transfer flavoprotein alpha subunit TERM 178 263890 - 263904 + g 80 -9.2 -4.1585 | overlap 263899 CGTTACTGTTTCTAT GGTGGC GTT GCCGCC TTTTGCGGCTTCTGG etfB 265136 - 264387 - | electron transfer flavoprotein beta subunit TERM 179 264417 - 264435 + g 71 -4.5 -4.59773 | overlap 264418 TTGGTTCTTGAGGAG GGTCACC AGTTC GGTGACG TTTTTCACCATCACG TERM 180 265500 - 265514 + G 81 -3.5 -5.15167 | overlap 265483 TCGCTGCGCTTGATG GGTGC GCGGA GCATC TTTTTGTTCATGGTG TERM 181 265713 - 265737 + G 73 -6.4 -4.46155 | gap 1, overlap 265702 ACTGGAAGGCGTTGC CGGAG-GCGGC GCGT GCTGCGTTCCG TTTTCTGCATGTATC rfbB 265352 - 266413 + | dTDP-glucose 4,6-dehydratase TERM 182 266656 - 266676 + G 84 -13.3 -3.10715 | overlap 266658 ACGATGTTGCATGAG CAGGCGTTG TTT CAGCGCCTG TTGGGTGATGGTACG TERM 183 267171 - 267189 + G 74 -7.4 -4.1552 | AGGGACCCATCAGTC GTTGCACG ATG CGTCCAAC TTTATTGGAACGATC rfbA 266476 - 267363 + | glucose-1-phosphate thymidylyltransferase rfbD 267360 - 267917 + | dTDP-4-dehydrorhamnose 3,5-epimerase rmlD 267914 - 268822 + | dTDP-4-dehydrorhamnose reductase xanB 270403 - 269000 - | phosphomannose isomerase-GDP-mannose pyrophosphorylase xanA 271805 - 270456 - | phosphoglucomutase TERM 184 270848 - 270861 + g 75 -3.7 -4.88405 | opp_overlap 270829, overlap 270859 GAGCGCTCATCTCAC CACCG TATA CGGCG TTTTCTTTACGCATT PD0214 272012 - 272212 + | hypothetical protein TERM 185 272379 - 272343 - T 100 -15.2 -4.2679 | opp_overlap 272349 272377, overlap 272344 CAAGGGTTACCAAAA GGGCTAGGCAGCTGGA ATATA TCCAGCTGCCTAGTCT GCGGCTTAAGCAGAT TERM 186 272378 - 272344 - T 100 -18.7 -3.15592 | opp_overlap 272349 272377, overlap 272343 AAGGGTTACCAAAAG GGCTAGGCAGCTGGA ATATA TCCAGCTGCCTAGTC TGCGGCTTAAGCAGA TERM 187 272349 - 272373 + T 90 -15.8 -2.63631 | opp_overlap 272344 272343 TTACCAAAAGGGCTA GGCAGCTGGA ATATA TCCAGCTGCC TAGTCTGCGGCTTAA cvaC 272702 - 272394 - | colicin V precursor TERM 188 272623 - 272611 - G 89 -3.3 -5.53991 | overlap 272619 GAGCCAGCAAAAAAA GCAGC AAC GCCAC CTACGATAGCTGCGT TERM 189 273245 - 273259 + G 83 -12.8 -3.27298 | GCTGGTGCCATCGGC GGCGCC ATC GGCGCC TTCGTCATTGACAAA PD0216 273032 - 273340 + | colicin V precursor TERM 190 273352 - 273388 + F 100 -17.5 -4.5032 | GTAATCTGTGGGATG GGTAGCTGGATTATCTT ATC AAGATATTCCAGCTGCC TTTATTATTAATATG TERM 191 274236 - 274254 + G 73 -8.8 -3.84246 | overlap 274237 GCATTGCTGGTGCCA TCGGCGGT CTC ATCGCCGG TTTCGTCATTGACAA PD0217 274028 - 274336 + | hypothetical protein TERM 192 274349 - 274385 + F 100 -17.5 -4.5032 | TAATCTGTGGAGATG GGTAGCTGGATTATCTT ATC AAGATATTCCAGCTGCC TTTATTCTTAATATG TERM 193 276802 - 276792 - g 74 -4.6 -4.69559 | overlap 276793 AAAGTGCAAAAGAAA GCCC AAT AGGC GGGAACTTTTTTGAA pspB 276209 - 279175 + | serine protease TERM 194 279193 - 279223 + T 100 -15.5 -3.30243 | TGAGGTGATGATGGA TGCCGACGTACGG TAGTT TCGTGCGTCGGCA TTGTCACGGATGGAT PD0219 280822 - 279635 - | sugar transporter TERM 195 280620 - 280610 - G 73 -5.4 -4.56702 | overlap 280612 TCCGAAGGAAAGAAA TAGG CTT CCTA GTAGATAGCCTGCGT PD0220 282278 - 281703 - | hypothetical protein TERM 196 282598 - 282622 + r 79 -8.5 -4.23892 | opp_overlap 282588, overlap 282599 AATATTGATCGCTAT CACCGCTTGCT GGA AGCAAGCGGAA TTTTCGGTGATTGGG TERM 197 282599 - 282621 + r 79 -12 -3.13853 | overlap 282598 ATATTGATCGCTATC ACCGCTTGCT GGA AGCAAGCGGA ATTTTCGGTGATTGG pfkA 283975 - 282692 - | 6-phosphofructokinase adk 284089 - 284652 + | adenylate kinase mpL 284947 - 286362 + | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase PD0224 288756 - 286627 - | hypothetical protein TERM 198 287622 - 287608 - G 71 -8.5 -3.85909 | GGACGGAAAGCCAAA GCCGC TGCTG GCGGC TGGCGGCTGCACGAC TERM 199 288162 - 288141 - G 70 -10.1 -3.44229 | overlap 288144 ATCCGATGACCAGAA GGAGCCGTC CGGC GACGGCTGC CACTGCGTCGTAGGC PD0225 288771 - 289430 + | serine/threonine protein kinase TERM 200 289444 - 289458 + T 73 -11.4 -2.67992 | overlap 289441 289431 AGCGGTGCATGGGTG GCGCTG TGG CAGCGC TCCTGTCGTGCTGTA TERM 201 289712 - 289690 - T 79 -12.1 -3.15544 | opp_overlap 289689 289687 289694, overlap 289694 TCGTATTTTGATGAA CGAACGATG GCTAG CATCGTTCG GTGCTGTCTGGCTGG pepA 291108 - 289741 - | leucine aminopeptidase yueF 292395 - 291232 - | transport protein PD0228 292795 - 292415 - | hypothetical protein PD0229 293217 - 292792 - | hypothetical protein TERM 202 293173 - 293128 - G 74 -3.4 -4.88288 | gap 3, opp_overlap 293154, overlap 293157 TAAAAGAAGATAAAA GGCGCGAACG-G-TAGCCTTG GATGAAG CAAGGCTGGCGCGTCCG-GCC CCAGTCACGGTTTCC PD0230 293639 - 293274 - | hypothetical protein htrA 295339 - 293894 - | heat shock protein TERM 203 294055 - 294067 + g 74 -6.9 -4.3295 | overlap 294049 ACCCATTGGCCGCAG CGCGG CTG CCGTG TTTGATTTTGTTGAC TERM 204 295302 - 295287 - G 77 -8.2 -4.08216 | CCAGTGGCTGCAAAA CCGCCG AATG CGGCAG CGATAGATAGCGTCA PD0232 296518 - 295622 - | cell division inhibitor rpfB 298931 - 297222 - | putative long-chain fatty acyl CoA ligase TERM 205 298652 - 298632 - G 74 -11.1 -3.21993 | ATTGACAACAGTTAA CCCGGCGCA TAG TGCGCCGAA GGTCGCTACTGGATA TERM 206 298691 - 298707 + g 74 -4.3 -4.81249 | overlap 298693 AGTTGAGCATCATCA GTGCGAT TCG GTCGCCC TTTTTGAGTTTCAAC TERM 207 299244 - 299260 + r 72 -2.9 -4.95155 | opp_overlap 299246, overlap 299246 CACTGATTGAAAAGT GATTGCT CAT GGCAAGC TTTTTCTCATGTGGG TERM 208 299485 - 299503 + r 88 -6 -5.47218 | AAAGAACCATATGCA GAGATACA GGG TGAATCTC TTTTTTTCAATGGAA TERM 209 299553 - 299572 + r 71 -3.7 -4.77442 | opp_overlap 299553 TGTTGTTGCAGAAAA TGTATTT AGATCG AAATACA TTTATTTATTATGTT TERM 210 299807 - 299823 + r 74 -3.7 -4.93296 | GCATGTCATAGTGCT CACTC GTATGCA GAGTG TTTTTATAGTACTGC rpfA 303144 - 300418 - | aconitate hydratase PD0235 303636 - 304034 + | hypothetical protein acnB 304088 - 306691 + | bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase TERM 211 306716 - 306753 + T 100 -16.4 -3.16564 | opp_overlap 306701, overlap 306711 GGACGTGGTGTCATC GCCCCCG-GCCAGGAGTT TGCC AGCTCC-GGCTCGGGGGC TTGATGAGGTAAGCA TERM 212 307130 - 307116 - T 71 -7 -4.1899 | opp_overlap 307116 307124, overlap 307104 307117 GCAGGGGACTGAAAA TCCCCG TGT CGGGGG TTCGATTCCCTCCCC TERM 213 307129 - 307117 - T 73 -10.5 -3.11073 | opp_overlap 307116 307124, overlap 307104 307116 CAGGGGACTGAAAAT CCCCG TGT CGGGG GTTCGATTCCCTCCC TERM 214 307190 - 307157 - T 79 -8.1 -4.25104 | opp_overlap 307162, overlap 307162 CCCCGGCCACCAAAA TTCAACGCCCAACTG TTCT CAGTTGGGCGTTTTC ATTTCCAGGCTCCGC TERM 215 307162 - 307185 + T 100 -16.8 -4.54727 | opp_overlap 307157 307162 GCCACCAAAATTCAA CGCCCAACTG TTCT CAGTTGGGCG TTTTCATTTCCAGGC TERM 216 307185 - 307162 - T 100 -16.8 -3.39521 | opp_overlap 307162, overlap 307157 GCCACCAAAATTCAA CGCCCAACTG TTCT CAGTTGGGCG TTTTCATTTCCAGGC PD0238 307881 - 307426 - | hypothetical protein TERM 217 307743 - 307770 + g 74 -2.6 -5.04385 | CGCTCGCTAACGTGA TGGTGCCCGT TGAAGAGC ACGAGCCCCA TTTTTTGCGCATGTC TERM 218 308797 - 308817 + H 70 -9.7 -3.08812 | overlap 308796 TTGCACCGCTGACGT CGCTGGAGT CGA ACTGCAGCG CTTTCTTAAGGGCAC TERM 219 313699 - 313736 + H 71 -9.7 -3.29461 | gap 1, overlap 313708 GGTTTGGTTGTGGGC GTGGC-CGTCGCCGCTCG CCC CGTGCGCCGCCGCGTCAC TTGTGCGGCGGCTTC TERM 220 313708 - 313765 + H 83 -10.5 -3.68619 | gap 3, overlap 313699 313757 GTGGGCGTGGCCGTC GCCGCTCGCC--CCGTGCGCCGCCGCGT CACTT GTGCGGCGGCTT-CGGCTGGCGGGGGGC TTTCGGTCCCTTGGA TERM 221 315035 - 315055 + H 70 -9 -3.40403 | overlap 315050 TATTTTGGTGCAGCG CGTGACGG CAATA TCGTCACG TTCTAGTGCAGCAAC PD0242 315036 - 315272 + | hypothetical protein PD0243 315387 - 315698 + | hypothetical protein PD0244 315682 - 315969 + | hypothetical protein tpiA 316260 - 317009 + | triosephosphate isomerase secG 317051 - 317449 + | preprotein translocase subunit SecG nuoA 317704 - 318060 + | NADH dehydrogenase subunit A nuoB 318030 - 318605 + | NADH dehydrogenase subunit B nuoC 318657 - 319409 + | NADH dehydrogenase subunit C nuoD 319406 - 320713 + | NADH dehydrogenase subunit D nuoE 320710 - 321237 + | NADH dehydrogenase subunit E nuoF 321242 - 322576 + | NADH-ubiquinone oxidoreductase NQO1 subunit TERM 222 323056 - 323072 + G 70 -6.5 -4.11394 | opp_overlap 323056, overlap 323044 323057 ACCCGCTGTATTCAA TGCACGC GTT GTGTGCG TTTTACCGCTGACAT TERM 223 323515 - 323533 + G 95 -14.6 -3.55966 | overlap 323510 323508 GCTGAGATCTTGAGT GCGCATCG TGG CGATGCGC TTGGTGTTTTGGTGC nuoG 322573 - 324807 + | NADH dehydrogenase subunit G nuoH 324837 - 325895 + | NADH dehydrogenase subunit H nuoI 325896 - 326387 + | NADH dehydrogenase subunit I nuoJ 326392 - 327060 + | NADH dehydrogenase subunit J nuoK 327057 - 327362 + | NADH dehydrogenase subunit K TERM 224 327789 - 327804 + G 70 -3.3 -4.74103 | opp_overlap 327789 TTTGGTGATGAGCAA CAACT TTTTAC AGTTG TTTTTCGGTTGGGAG nuoL 327370 - 329511 + | NADH dehydrogenase subunit L nuoM 329533 - 331038 + | NADH dehydrogenase subunit M TERM 225 331784 - 331805 + G 80 -4.3 -5.01553 | opp_overlap 331787 TTGCCCGATGTGTAT CAAGGGGCG CCGA CACCCATTG TTTTGTTTATCAGTT nuoN 331073 - 332530 + | NADH dehydrogenase subunit N TERM 226 332560 - 332576 + T 75 -2.9 -5.13016 | overlap 332563 CACAGTATAGAAAGT CACGCAG CTT TTGCTTG TTTTTAATTTTAATT fabG 333971 - 333231 - | 3-ketoacyl-(acyl-carrier-protein) reductase TERM 227 333732 - 333743 + g 77 -7.2 -4.27316 | CAAAACGTCAATCTC GCCG ACCT CGGC TTTTACCTTGGCAAA citN 335361 - 334030 - | Mg++/citrate complex transporter TERM 228 334085 - 334057 - G 77 -4 -4.98531 | gap 1 TGGGTAAATCAAAAA CAATAG-GCTACT GAGT AATAGCACCATTG AGATTAACACCGCCC TERM 229 335185 - 335197 + g 72 -4.1 -4.77157 | opp_overlap 335175 CATCAGCATCACGCC GGTTG GCG CAATC TTTTTGATCCCTTCA TERM 230 335281 - 335309 + g 70 -9.6 -3.33492 | gap 1, opp_overlap 335289 GGGCACGATGATCAG TGAGACCAGCGGC GAAA GCCGCTTG-CTCA TTATCAAATACATGA TERM 231 335413 - 335444 + r 75 -10.9 -3.06183 | gap 1, opp_overlap 335403 TAGCATGCCGTTATC GCGCATACGCCGCA CCTAT TGCGGCGTA-GCAC TTGGCTGAAAGTCAA oprO 336690 - 335494 - | porin O precursor TERM 232 336197 - 336208 + g 73 -5.8 -4.39568 | overlap 336196 CTGTAGGCGCTGACC CACC AAGT GGTG TTTTGGTGTGTGGCT tctD 336890 - 337585 + | two-component system, regulatory protein TERM 233 337815 - 337827 + G 81 -2.6 -5.38321 | GTATTGGCGATGGCA CCTG AAGAC CGGG TTTTTTATCGTGTTT tctE 337569 - 338942 + | two-component system, sensor protein TERM 234 339935 - 339949 + G 76 -2.8 -4.99035 | GTGTATCTGGATACG TTGAAG CGT CGTCAA TTTTTGTATACGTGG afuA 338951 - 339991 + | periplasmic iron-binding protein TERM 235 340162 - 340184 + F 76 -7.6 -4.23529 | CGCAGCGTGATATGG CTCCCCAGCG TTG CGTTGGCGGG TTTGTCTGTTGCTGT agmR 340538 - 341170 + | LuxR/UhpA family transcriptional regulator PD0269 342854 - 341217 - | sensor histidine kinase TERM 236 343438 - 343463 + r 95 -12 -4.00038 | opp_overlap 343443 GGTGCGCTGACTGGA CGATATGACC TGTTGC GGTCATATCG TTTCTCATGATGATC TERM 237 343514 - 343484 - R 83 -9 -4.21908 | opp_overlap 343481 343489, overlap 343486 343487 343489 CATGATGATCGAAAA TAGCAGCGGCAC GCGTCCA GTGCCGCTGTCA TGATGATTTAGGGTT TERM 238 343512 - 343486 - R 76 -9.4 -3.70674 | opp_overlap 343481 343489, overlap 343484 343487 343489 TGATGATCGAAAATA GCAGCGGCAC GCGTCCA GTGCCGCTGT CATGATGATTTAGGG TERM 239 343511 - 343487 - R 82 -12.9 -2.81922 | opp_overlap 343481 343489, overlap 343486 343484 343489 GATGATCGAAAATAG CAGCGGCAC GCGTCCA GTGCCGCTG TCATGATGATTTAGG TERM 240 343509 - 343489 - R 70 -9.7 -2.95081 | opp_overlap 343489 343481, overlap 343487 343486 343484 TGATCGAAAATAGCA GCGGCAC GCGTCCA GTGCCGC TGTCATGATGATTTA oprO 344761 - 343592 - | polyphosphate-selective porin O TERM 241 346064 - 346090 + G 75 -3.7 -4.91852 | gap 1, opp_overlap 346027 346063 346064, overlap 346067 TCAGGCAACCAACAC G-GAGCTGACGC CAGC GCATCAGCTTGC TTTGTTTTTGGTGGC dctA 345057 - 346406 + | C4-dicarboxylate transporter DctA TERM 242 348458 - 348474 + G 81 -8.1 -4.30576 | GAGCCGAGTGTGGCG TTACTGT CGC ACAGTAA TTTTGGTAGTCACGA maeB 346574 - 348868 + | malic enzyme TERM 243 349042 - 349015 - T 100 -18.6 -2.71364 | opp_overlap 349015 349018, overlap 349018 GTAGCGCCTGAAGGA CAATGCCCCTGA ACAT TCAGGGGCATTG TTGGTGTGTTGCTGC TERM 244 349015 - 349042 + T 100 -18.6 -3.38951 | opp_overlap 349015 349018, overlap 349018 GTAGCGCCTGAAGGA CAATGCCCCTGA ACAT TCAGGGGCATTG TTGGTGTGTTGCTGC TERM 245 349039 - 349018 - T 95 -14.5 -3.50853 | opp_overlap 349015 349018, overlap 349015 GCGCCTGAAGGACAA TGCCCCTGA ACAT TCAGGGGCA TTGTTGGTGTGTTGC TERM 246 349018 - 349039 + T 100 -14.5 -3.82205 | opp_overlap 349018 349015, overlap 349015 GCGCCTGAAGGACAA TGCCCCTGA ACAT TCAGGGGCA TTGTTGGTGTGTTGC TERM 247 349078 - 349090 + T 73 -4.1 -4.79949 | overlap 349061 TGTTGCTGTGCTGCC CGTTG TAT CAATG TTGTTTTTTTAGGCC htpG 351009 - 349099 - | heat shock protein 90 TERM 248 349846 - 349899 + g 95 -11.1 -4.59109 | overlap 349886 TCCTTCTTTCAGTAC CTGGCCAAAGTTTTTCCAGAAGGTT TTGT AATCTTCTGGGGCGTCTTTGGCGAG TTTTTCAAGCATGTC TERM 249 350470 - 350492 + g 71 -11.2 -2.95896 | overlap 350483 TTCTTTCAGGTGGAG CACGACGCGG GTG CCGCGTTGCG GTTTATCAATGGTGG TERM 250 350483 - 350493 + g 74 -8.2 -3.93695 | overlap 350470 AGCACGACGCGGGTG CCGC GTT GCGG TTTATCAATGGTGGC TERM 251 351179 - 351197 + H 75 -11 -3.07895 | CCGTTGTTTTTTGTT TGCCGATG AAT CATCGGCG TGTGTTACCGGTGCG PD0274 351184 - 351810 + | hypothetical protein coaD 351807 - 352295 + | phosphopantetheine adenylyltransferase TERM 252 352675 - 352691 + G 90 -12.3 -4.00868 | TTTGGTTCTTCGGCG TCGGCCA AGA TGGCCGA TTTGATTGTGGCTGC PD0276 352354 - 352839 + | hypothetical protein PD0277 353013 - 353297 + | ferredoxin TERM 253 354279 - 354291 + G 71 -4.8 -4.57474 | ATCGTACTTTTTTTC TCGG TGATC CCGA TTTTGTGTCGATTCC ggt 353294 - 355105 + | gamma-glutamyltranspeptidase TERM 254 355286 - 355296 + F 72 -5.4 -4.45664 | CTTGGTTTTTCTGTT TGTG CCG CACA TTTTACTTAGATTAA TERM 255 355309 - 355319 + F 76 -4 -5.08824 | ACATTTTACTTAGAT TAAC CAC GTTA TTTTTTCGATAGAAA TERM 256 356081 - 356107 + G 87 -15.9 -2.9039 | overlap 356068 ACGCTTGGATGACGA CCCGCCAGCAC ACGAG GTGTTGGCGGG TGTATACGATGCTAT TERM 257 356687 - 356699 + G 73 -9.1 -3.83169 | overlap 356673 356694 ACCAGTACCGATACG GGTGG TTG CCACC TTTGGTGGCTTTGTC TERM 258 356694 - 356708 + G 85 -11.4 -3.99592 | overlap 356687 356702 CCGATACGGGTGGTT GCCACC TTT GGTGGC TTTGTCATCGTGAAT PD0279 355854 - 357638 + | GGDEF family protein TERM 259 357672 - 357648 - T 78 -5.7 -4.78661 | gap 1, opp_overlap 357647 ATGTAAAAAGGAAAA GGGGCATCCA TTGTGT CGG-TGCCCC GTTCGATACATTGCC PD0280 358595 - 357738 - | hypothetical protein pyrC 359944 - 358595 - | dihydroorotase PD0282 360219 - 359941 - | hypothetical protein dksA 360312 - 361253 + | DnaK suppressor TERM 260 361649 - 361662 + T 73 -9.5 -3.3573 | overlap 361640 GCTGATCCGTTGCAT CCGGC GCGT GCCGG TTGTGCGATGGTTTA tetV 363902 - 362646 - | drug:proton antiporter TERM 261 363247 - 363225 - G 71 -6.3 -4.27519 | gap 2, opp_overlap 363244 ATTGGAGAACACAAA GC-GCA-CGCC CTC GGCGATGCTGC CCAATACTGGGGCAC PD0286 364339 - 363899 - | hypothetical protein cysS 365848 - 364424 - | cysteinyl-tRNA synthetase TERM 262 364652 - 364666 + g 71 -10 -3.53811 | opp_overlap 364639 364661 AAGAGCCAGTCCGGC GCCAAG CAA CTTGGC TTTCAGCCGGGTGAG TERM 263 365402 - 365384 - G 74 -9.6 -3.62591 | overlap 365377 CCCATAATCGGCAAA GCTGTTCA CCG CGAACAGC ACATGCTCCATCGCG PD0288 365995 - 366522 + | hypothetical protein PD0289 366528 - 366755 + | hypothetical protein TERM 264 366794 - 366808 + F 100 -5.6 -5.95286 | overlap 366795 CTTTAAAAAATCCTG GCCAGC GAA GCTGGG TTTTTTCTTTTTCAT TERM 265 366795 - 366807 + F 79 -9.1 -4.13511 | overlap 366794 TTTAAAAAATCCTGG CCAGC GAA GCTGG GTTTTTTCTTTTTCA TERM 266 367790 - 367770 - g 74 -6.8 -4.30014 | opp_overlap 367770 367768 367771, overlap 367763 367771 TTGACGAAGCCAAAA TGGCGTTG ACCAA CAACGCCG TCTTCTCGCATTGCT TERM 267 367789 - 367771 - g 71 -10.3 -3.17526 | opp_overlap 367771 367770 367768, overlap 367763 367770 TGACGAAGCCAAAAT GGCGTTG ACCAA CAACGCC GTCTTCTCGCATTGC TERM 268 367915 - 367903 - g 85 -9.1 -4.42386 | CCTGCATGTACAAAA GGCCA TCA TGGCC GCACTTGCTTCCCAA argF 366923 - 367933 + | N-acetylornithine carbamoyltransferase argG 367964 - 369169 + | argininosuccinate synthase argE 369240 - 370334 + | acetylornithine deacetylase argB 370399 - 371715 + | acetylglutamate kinase argC 371718 - 372701 + | N-acetyl-gamma-glutamyl-phosphate reductase argH 372722 - 374059 + | argininosuccinate lyase TERM 269 374268 - 374287 + G 74 -10.6 -3.54935 | overlap 374269 374279 GGGTAGCAGCCTCCT CGCCGCCG ATGG CGGCGGCC TTTCCCCCCGCTTTG TERM 270 374269 - 374286 + G 83 -14.1 -2.7264 | overlap 374268 374279 GGTAGCAGCCTCCTC GCCGCCG ATGG CGGCGGC CTTTCCCCCCGCTTT proB 374179 - 375333 + | gamma-glutamyl kinase proA 375625 - 376902 + | gamma-glutamyl phosphate reductase PD0298 377366 - 377875 + | hypothetical protein PD0299 377899 - 378372 + | hypothetical protein PD0300 378383 - 378889 + | hypothetical protein PD0301 378907 - 379353 + | hypothetical protein PD0303 379918 - 380391 + | hypothetical protein PD0304 380402 - 380905 + | hypothetical protein TERM 271 382414 - 382392 - g 70 -9.8 -3.35679 | CGGGCGTATTGATAA CGGCAGCGAA CTG TTCGGCGCCG ATACCGTGCTCAGCA frpC 380923 - 385746 + | hemolysin-type calcium binding protein TERM 272 385771 - 385794 + T 100 -19.6 -3.89041 | CTGTTGTTGTGTTGT CAGGCCCCGC AGTT GCGGGGCCTG TTGTGTTTGGTCTCT fcy1 386438 - 385941 - | cytosine deaminase PD0307 386928 - 386446 - | manganese transport regulator MntR mntH 387094 - 388512 + | manganese transport protein MntH ate1 389787 - 389023 - | arginyl-tRNA-protein transferase PD0310 390702 - 390211 - | pathogenicity-related protein tesB 391602 - 390706 - | acyl-CoA thioesterase II TERM 273 390810 - 390796 - G 71 -4.2 -4.56775 | overlap 390797 390798 ATTGCGGGTGAAAAA TTGTCC GCG GGCCAA TCCGCGGGCGCCCTG TERM 274 392532 - 392501 - R 100 -23.2 -3.91084 | opp_overlap 392507, overlap 392507 TCACTGCTAAGCAAA GGAAAAGCCGCTGG CAAA CCAGCGGCTTTTCC GAACACATGAAGTAC TERM 275 392526 - 392507 - R 100 -15 -4.62054 | opp_overlap 392507, overlap 392501 CTAAGCAAAGGAAAA GCCGCTGG CAAA CCAGCGGC TTTTCCGAACACATG TERM 276 392507 - 392526 + r 100 -15 -4.07885 | opp_overlap 392507 392501 CTAAGCAAAGGAAAA GCCGCTGG CAAA CCAGCGGC TTTTCCGAACACATG PD0312 392878 - 392558 - | hypothetical protein TERM 277 392922 - 392908 - H 75 -11.4 -3.07816 | TCGTTAGTTAGGCAA CGCGCA AGA TGCGCG CGCCCAACATGATGA pspB 393994 - 396900 + | serine protease TERM 278 396918 - 396948 + T 100 -15.5 -3.30243 | TGAGGTGATGATGGA TGCCGACGTACGG TAGTT TCGTGCGTCGGCA TTGTCACGGATGGAT PD0314 397957 - 397757 - | hypothetical protein gaa 400181 - 398190 - | glutaryl-7-ACA acylase precursor TERM 279 399884 - 399900 + g 74 -4.3 -4.80882 | TTGCGAACACGTCAT CTCCCTG TGG CAGGAGG TTTTTCATGTGCGGT TERM 280 400261 - 400283 + r 77 -10.6 -3.46236 | TGTGTTATCGCAGTG CTACCTCATG GAT CGTGAGGTGG TTGCCTTTTGTTGGT plsB 403416 - 400825 - | glycerol-3-phosphate acyltransferase TERM 281 402002 - 402018 + g 74 -4.4 -4.7254 | overlap 401994 AGTTCATCCAGGTAG CTGGTG CCTTC CATCAG TTTTTCATAGCCGAT TERM 282 402275 - 402256 - G 93 -9.2 -4.7497 | TCGACGGATGAAAAA TGCGCCGC ATTT GCGGAGCA GTGTGCCCACGACAG TERM 283 404776 - 404798 + G 70 -9.2 -3.76373 | CTTATGCTTGTTTAT TAGCGTCATT GCT GGTGACGCTA TTTGACTATTACCCG PD0317 404745 - 404966 + | hypothetical protein TERM 284 406436 - 406450 + G 73 -5.7 -4.50943 | overlap 406425 GGCCGATGCACGTGC TGCAC CTTAT GTGCA TTTTCTGCCTTCTTA PD0318 405465 - 408491 + | hypothetical protein TERM 285 408499 - 408535 + T 100 -14.5 -4.53705 | AGTTCTGAAGTGCCG CATGCCCGTCGTCTG CTTGTGT TAGCCGACGGGCATG TTTTCTATAGCAATT ahcY 410040 - 408598 - | S-adenosyl-L-homocysteine hydrolase TERM 286 409946 - 409958 + g 70 -5.5 -4.41348 | CCCGGCATTTCGTGC TCGGC AAT GTCGA TTTCTTTGCGGCCCC PD0320 411144 - 412505 + | peptide synthase rnhB 414094 - 413390 - | ribonuclease HII lpxB 415308 - 414151 - | lipid-A-disaccharide synthase lpxA 416176 - 415385 - | UDP-N-acetylglucosamine acyltransferase TERM 287 415462 - 415474 + g 70 -5.5 -4.4078 | TGTCTTTGGCTTGTT CAGCG AGT TGCTG TTTTGCTTCAGCCAG TERM 288 415932 - 415949 + g 78 -2.6 -5.16133 | CCGATCAGTAGTTCG GTGCGC TCGCCT GCGAAC TTTTTGTCTTGTGGT fabZ 416680 - 416198 - | (3R)-hydroxymyristoyl-ACP dehydratase lpxD 417693 - 416677 - | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase TERM 289 417759 - 417814 + r 74 -5.9 -4.57073 | opp_overlap 417768, overlap 417764 CATGCGGCAGTGAAT CAGACGGAATGCTGCCCCCGCGCGC ATTGTA GTGCTTGGGGGGAGCAAACCCTGTG TTTTTAAAGCGGCTG oma 420236 - 417882 - | outer membrane antigen PD0327 421669 - 420335 - | hypothetical protein dxr 422880 - 421696 - | 1-deoxy-D-xylulose 5-phosphate reductoisomerase TERM 290 421876 - 421864 - G 80 -9.1 -4.15044 | opp_overlap 421863 421864 GCGCCCCTGAAGAAA CGCTG AAA CAGCG ATTTCATTGGCAGCA cdsA 423737 - 422883 - | phosphatidate cytidylyltransferase uppS 424501 - 423734 - | undecaprenyl pyrophosphate synthetase frr 425061 - 424504 - | ribosome recycling factor TERM 291 425674 - 425693 + r 85 -13.6 -3.08133 | ACCAGTGATGCCGAA CGCCAAGG GATC CCTTGGCG TTCGGTGAATAGGTG fadL 427158 - 425815 - | fatty acid outer membrane porin PD0333 427372 - 428070 + | hypothetical protein TERM 292 428200 - 428155 - f 71 -3.4 -4.76874 | gap 1, opp_overlap 428168, overlap 428159 428160 AATACAAAATCAAAA TG-AAGTGACATGAGATGGAC GTATA ATCCATCTCATGTCAAAAACA CTATACAAAATTATT TERM 293 428195 - 428159 - f 95 -13.2 -3.81408 | opp_overlap 428168, overlap 428155 428160 CAAAATCAAAATGAA GTGACATGAGATGGAC GTATA ATCCATCTCATGTCAA AAACACTATACAAAA TERM 294 428194 - 428160 - f 100 -16.7 -2.87218 | opp_overlap 428168, overlap 428159 428155 AAAATCAAAATGAAG TGACATGAGATGGAC GTATA ATCCATCTCATGTCA AAAACACTATACAAA PD0334 428189 - 428509 + | hypothetical protein TERM 295 428751 - 428733 - f 79 -8.8 -4.08945 | opp_overlap 428731 ATCAGTGTTGTAAAA GATGTCGC GTA GCGGCATC ACGTGTATTTACTTT PD0336 429390 - 429614 + | hypothetical protein pyrH 430465 - 429722 - | uridylate kinase PD0338 431209 - 430721 - | hypothetical protein TERM 296 431155 - 431131 - G 100 -8.6 -5.13722 | gap 1, opp_overlap 431131 431140 TGTAGCAAAACAAAA GGGCCAAGCCT ATAA AGGCT-GACCC TTTAAGTTTTACTTT TERM 297 431377 - 431365 - R 77 -3.3 -5.11613 | overlap 431368 431369 431370 AGATGAGTTAAAAAA GAAGG TGC CCCCC CTACATAGGGGGGCA TERM 298 431394 - 431368 - R 74 -5.7 -4.64763 | overlap 431365 431369 431370 TGAGTTAAAAAAGAA GGTGCCCCCCC TACAT AGGGGGGCAAA TATGGCGTCCCCACG TERM 299 431393 - 431369 - R 70 -9.2 -3.37773 | overlap 431365 431368 431370 GAGTTAAAAAAGAAG GTGCCCCCCC TACAT AGGGGGGCAA ATATGGCGTCCCCAC TERM 300 431392 - 431370 - R 78 -12.7 -2.61579 | overlap 431365 431369 431368 AGTTAAAAAAGAAGG TGCCCCCCC TACAT AGGGGGGCA AATATGGCGTCCCCA eda 432514 - 431855 - | keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase edd 434519 - 432627 - | phosphogluconate dehydratase pgl 435379 - 434660 - | 6-phosphogluconolactonase glk 436389 - 435376 - | glucokinase zwf 437888 - 436386 - | glucose-6-phosphate 1-dehydrogenase TERM 301 438833 - 438871 + G 73 -10.4 -3.31905 | overlap 438832 ACCATCCGGCGAATC TGTTTGTTGCTGGTTTTC TTG GTAATCCAGCAATGAACA TGTTGTCTGGCCGAT algS 438148 - 439242 + | sugar ABC transporter ATP-binding protein PD0348 440304 - 439387 - | hypothetical protein TERM 302 440332 - 440344 + H 76 -4.8 -4.76041 | opp_overlap 440332 440330 TCTTTTAAGATAAGA CGCT CAGTA AGCG TTTTTGCTGAATGTA PD0349 440505 - 440723 + | hypothetical protein PD0350 440748 - 441176 + | succinate dehydrogenase membrane anchor subunit TERM 303 441502 - 441521 + G 73 -5.6 -4.64598 | overlap 441504 441510 GAGATTTATCGCTGT CCTTGGCG CGGT CGCCAGCG TTTTTGCGGTCGTTC sdhD 441173 - 441556 + | succinate dehydrogenase hydrophobic membrane anchor subunit sdhA 441564 - 443354 + | succinate dehydrogenase flavoprotein subunit sdhB 443375 - 444160 + | succinate dehydrogenase iron-sulfur subunit TERM 304 444330 - 444308 - g 77 -7.6 -4.2528 | overlap 444311 GCTGAATTGAACAAA CTACGTTGGC GTA GCCGACGTGG GATGCGTGAATTGGA PD0354 444236 - 444529 + | hypothetical protein PD0355 444552 - 444932 + | hypothetical protein TERM 305 446115 - 446139 + G 74 -11.5 -3.29144 | GATTACTCTGATGGC GTTGGCAATGA GTT TCATTGCCACC TTGTACCCGGCGTGG lolC 444958 - 446199 + | lipoprotein releasing system transmembrane protein lolD 446231 - 446914 + | ABC transporter ATP-binding protein TERM 306 447332 - 447346 + F 73 -11.4 -2.55015 | overlap 447336 TGTTAAGTGTGATCC GGCACG CAG CGTGCC TGCGTTACCTCGCGT TERM 307 448022 - 448040 + G 76 -8.8 -4.03234 | ATTTACGTGCGTTGG CCTTGGGT GAT ACCCGGGG TTTGTCTCAACAGGA TERM 308 449301 - 449315 + G 74 -7.8 -4.16016 | ATTGCGTATCGACAC GCGCTG GGG CAGTGC TTTGTTGACGGGTGA comA 447370 - 449739 + | DNA uptake protein tolQ 449724 - 450386 + | biopolymer transport protein tolR 450391 - 450828 + | biopolymer transport protein TERM 309 451006 - 451054 + G 76 -3 -5.05606 | gap 1, opp_overlap 451016, overlap 451007 451022 CCAACGAAACCTTTA TCGAGCGAAACCGTGAGGTGGCC CTGT GGCTGCCTCTTGGAATTG-TCGG TTTGTTTTTGTTACG TERM 310 451667 - 451684 + G 78 -7 -4.55689 | TGAAGCTTTGGCCGG TCGCCT CAGTCC AGGCGA TTTTGTCTCGCTGAT msbA 450825 - 452594 + | ABC transporter ATP-binding protein TERM 311 453169 - 453180 + G 71 -5.8 -4.371 | GCCGATGGTGCGTGG TCGC CTTT GCGA TTTTCGTGTGCTCAA lpxK 452591 - 453610 + | tetraacyldisaccharide 4'-kinase TERM 312 453891 - 453875 - T 100 -13.7 -4.08692 | opp_overlap 453877 453890, overlap 453863 TAAGCTGCCGGAAAA GGCGCTG CTC CAGCGCC TCGCGGATGGAGCGG D 454751 - 454017 - | phage-related tail protein TERM 313 454115 - 454140 + gT 100 -10.5 -4.96848 | gap 1 GGTTGTTGGGCCGCT CGGCT-TCGATG CTA CATCGGTAGCCG TTTTTGTCTAGGCCA PD0364 455607 - 454636 - | hypothetical protein TERM 314 454753 - 454796 + gr 86 -3.7 -5.40072 | overlap 454777 GTGGGAGTCACCAAT CAGGGTGCCTTGGGATTGG AGCGAG CCTGTCATGAGGCTTCCTG TTTTTTTCACCAGAG I 456172 - 455615 - | phage-related tail protein J 457058 - 456165 - | phage-related baseplate assembly protein W 457396 - 457058 - | phage-related baseplate assembly protein higA 457594 - 457875 + | proteic killer suppression protein higB 457886 - 458161 + | proteic killer active protein PD0370 458249 - 458551 + | hypothetical protein PD0371 458554 - 458955 + | hypothetical protein V 459611 - 459024 - | phage-related baseplate assembly protein PD0373 460150 - 459608 - | hypothetical protein PD0374 460647 - 460126 - | hypothetical protein TERM 315 460449 - 460477 + g 72 -3.8 -4.68103 | gap 1, overlap 460453 TTTGGTCGCGTTGTC GATAGGTGCGCAG GCGG CGGCGCA-CGATC TTTTGTTGGAGTTGC PD0375 460970 - 460644 - | hypothetical protein TERM 316 460868 - 460856 - G 75 -6.3 -4.56775 | AGGTCGCGTCAAAAA CAATG GTG CATTG ATGGACGCGCCCCGT PD0376 461227 - 460967 - | hypothetical protein PD0377 463119 - 461245 - | hypothetical protein TERM 317 463062 - 463080 + g 81 -12.4 -3.54424 | opp_overlap 463055 ATAGGACATCGGCAT GGCGGTAC TGG GTGCCGCC TTTGCGAAGGTCCCG gp4 463748 - 463116 - | phage-related portal protein TERM 318 463624 - 463646 + g 74 -9.8 -3.76224 | GAGAGATCCATGCCC GCAGCCAAGC TTT GTTTGGCGGC TTTGGTGAATAAGCC dpoL 463799 - 464263 + | phage-related DNA polymerase PD0380 464260 - 464538 + | hypothetical protein PD0381 464848 - 464540 - | hypothetical protein TERM 319 464782 - 464799 + g 70 -6.9 -4.09739 | CGGCCTCTGCGTGCG CCGCAGG AACC CCTGCCG TTTTCAGCCGGTTCG PD0382 464933 - 466351 + | hypothetical protein TERM 320 466384 - 466394 + G 74 -6.8 -4.31166 | opp_overlap 466365, overlap 466373 ACATGTGGCATGCCC CCAG CCG CTGG TTTATGTCTTTCTAG PD0383 466348 - 466602 + | hypothetical protein int 466592 - 467611 + | phage-related integrase TERM 321 468160 - 468192 + F 74 -11.4 -2.84276 | gap 1, overlap 468158 468162 ATTAGCTGTGTATGG GAGCCGTTGCTGCCA CTGG TGGTAGTA-CGGCTC TACTTGATTCAAAAT parA 468384 - 469025 + | partition protein PD0386 469050 - 469529 + | hypothetical protein PD0387 469534 - 470106 + | hypothetical protein cls 470103 - 472061 + | cardiolipin synthase TERM 322 472621 - 472607 - T 85 -12.8 -3.36289 | opp_overlap 472603 CAGCAGCGCAATTAA CCGCGG CTA CCGCGG TGGCTGTATCGGTAT PD0389 473422 - 472994 - | hypothetical protein TERM 323 474113 - 474124 + r 70 -2.2 -4.96501 | ACGTAGTACGGCTTA GTTG GTTT CGAC TTTGTTTTTCTAAGC PD0390 474429 - 474226 - | hypothetical protein PD0391 475171 - 474686 - | L-asparaginase wrbA 476013 - 475414 - | tryptophan repressor binding protein pncB 476588 - 477772 + | nicotinate phosphoribosyltransferase TERM 324 477819 - 477841 + T 72 -2.7 -5.08824 | ATCGGATACTGCACT CAATGCTTG ATTGA CGATCATTG TTTTTTGGCTACGCC PD0394 478535 - 477960 - | hypothetical protein TERM 325 479761 - 479784 + r 75 -9.6 -3.63922 | overlap 479751 479760 TTTTTGGAGCCGAGC TGCTCCTCCA TTGG TTGAGGAGCA TGTTTTGAAGCAGCT PD0395 480182 - 479889 - | hypothetical protein TERM 326 480942 - 480957 + G 76 -5.4 -4.69053 | overlap 480950 GGTGACAATCTGCGT GTTGTG CTGC CACGAC TTTTGTTAAATCGTG TERM 327 482676 - 482657 - g 80 -9.2 -4.1899 | TGATTTTATGGAAAA CACGCGTC AGCA GGCGCGTG ATAGAGGGTATGTAG polA 480267 - 483038 + | DNA polymerase I TERM 328 483264 - 483296 + F 100 -12 -5.30199 | CAATCCCCGCTTCTG GCCTCGCCGACC TAATCCCCT GGTCAGCGAGGC TTTTTATTGGTTTTT dapB 483688 - 484398 + | dihydrodipicolinate reductase carA 484596 - 485720 + | carbamoyl phosphate synthase small subunit TERM 329 486877 - 486858 - g 71 -10 -3.53012 | GCGTTGGCTTCCAAA GCGACTGG TTTC CCAATCGC TAAGATTGCGGCAAA TERM 330 488750 - 488771 + G 70 -5 -4.46514 | overlap 488751 AGCCGGCGATATCCG TGCCCCGC AACCAG GCAGGGCG TTTGTTTCGGTGCGT carB 485919 - 489161 + | carbamoyl phosphate synthase large subunit greA 489158 - 489634 + | transcription elongation factor GreA TERM 331 490066 - 490086 + GF 77 -11.9 -2.80016 | overlap 490064 490068 AGGCTTGTTTGCCCG CATTCTCCG CCC CGGAGGATG TCCTTGGTGATGACC TERM 332 490515 - 490525 + GF 72 -2.4 -4.83269 | ACCATGACCCGTGCG CACC GTT GGCG TTTTTGGTGTGGTGT rpfE 489681 - 490562 + | regulatory protein TERM 333 491337 - 491350 + GF 70 -9.5 -3.10715 | GTGCTTTGGTTGCTG CCGGC TTGC GCCGG TTGCGTCGTGGTCAA recJ 490532 - 492373 + | single-stranded DNA exonuclease TERM 334 493268 - 493285 + G 76 -5.5 -4.71061 | overlap 493269 CATGTGCTGAACGGG GTCGCTG AAGC CAGCGAA TTTTTGGATCTGGCT prfB 493256 - 494164 + | peptide chain release factor 2 TERM 335 495004 - 495014 + G 71 -8.2 -3.89346 | TCCCAGGAGGTGCTG CGGC TAA GCCG TTTGTGACCTACCAC lysS 494346 - 495866 + | lysyl-tRNA synthetase TERM 336 497023 - 497037 + G 70 -5.6 -4.49556 | CATCACCTATTTGTA CGCGCA GCG TGGGCG TTTATTTGATCCACA rpfG 496004 - 497158 + | response regulator rpfC 497304 - 499295 + | regulator of pathogenicity factors rpfF 500190 - 499318 - | enoyl-CoA hydratase TERM 337 502560 - 502574 + G 71 -11.4 -3.00022 | GTTGGCTGGTTTTGC CTCCCG CAT CGGGAG TGTGTCTACCCTGGA lysC 500470 - 503076 + | bifunctional aspartate kinase/diaminopimelate decarboxylase protein PD0409 503077 - 504528 + | hypothetical protein TERM 338 504769 - 504792 + G 71 -7.4 -3.95584 | gap 1 CTCTCCGCTGGCTGT TGCTGCTACCG CCG CGGGAGC-GCA TTTCATTGGTGGCAC murD 504509 - 505915 + | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase TERM 339 506513 - 506529 + F 73 -10.9 -2.56271 | overlap 506504 506487 506512 506509 506515 CGGGATTCTTACGTT GAGATCG GTT CGATCTC CTGTTGTGCTAGAGC mutT 506922 - 507884 + | hypothetical protein metF 508765 - 507938 - | 5,10-methylenetetrahydrofolate reductase omp28 509984 - 509256 - | outer membrane protein TERM 340 510367 - 510386 + G 74 -8.6 -4.04206 | gap 1 GTCGATTTGGCTGAA GCGGC-AAC GAT GTTGGCCGC TTTATCTGGGCGTAC maf 510073 - 510672 + | Maf-like protein cafA 510673 - 512166 + | ribonuclease G TERM 341 512847 - 512873 + G 83 -14.4 -2.79209 | overlap 512842 GATTAATCTGCGGGT GCGTGTGGCCGG AGA TCGGCTACGCGC TGGTGTTCATGGTTG PD0417 512314 - 516138 + | hypothetical protein TERM 342 517139 - 517157 + G 70 -8.8 -3.75024 | overlap 517140 ATTGGTGAGCGCGTC GCGTCACC AGG GGTGACGA TTGTTGATGATGGGA TERM 343 517140 - 517156 + G 72 -12.3 -2.84693 | overlap 517139 TTGGTGAGCGCGTCG CGTCACC AGG GGTGACG ATTGTTGATGATGGG tldD 516263 - 517720 + | TldD protein TERM 344 517950 - 517960 + T 74 -5.4 -4.66609 | opp_overlap 517950 CGTTGCTCAATGACA CTTC TTG GAAG TTTTTGCGTGCAGTG PD0419 518784 - 518215 - | hypothetical protein TERM 345 518406 - 518424 + g 77 -11 -3.55548 | CAGTGAGTGCGCTGT CGCCTTCT TCG AGGAGGCG TTTGCGCCACTGTTC TERM 346 519550 - 519565 + G 71 -8.2 -3.90744 | opp_overlap 519530 CGGAGCGCACTGTTG CGCGGT TGCA GCCGCG TTCTTTGGCGACGAC pmbA 518844 - 520211 + | PmbA protein act 521203 - 520298 - | transcriptional regulator wrbA 521418 - 521987 + | tryptophan repressor binding protein TERM 347 522354 - 522388 + F 88 -12.2 -3.64488 | overlap 522352 GATTTCGCTATTTCT TTTTCCGGTTGCGCCG GTG TGGTGTGACCGGAAGA TCTTTTACGAAAATT adhP 522419 - 523477 + | NADP-alcohol dehydrogenase TERM 348 523677 - 523689 + G 73 -5.5 -4.56597 | TTGATCTTTCCGACC CGGTC AAT GATCG TTTTTGGAAGAACAA PD0424 523514 - 524143 + | hypothetical protein glmU 526937 - 525564 - | UDP-N-acetylglucosamine pyrophosphorylase pheA 527878 - 527303 - | chorismate mutase atpC 528556 - 528125 - | F0F1 ATP synthase subunit epsilon TERM 349 528543 - 528559 + g 75 -6.5 -4.40358 | overlap 528545 TCACAACGGATAGTG CTCATGG ATG CCATGTG TTTTCTAGGGTGAAT atpD 530026 - 528626 - | F0F1 ATP synthase subunit beta atpG 530972 - 530109 - | F0F1 ATP synthase subunit gamma atpA 532611 - 531064 - | F0F1 ATP synthase subunit alpha TERM 350 531653 - 531672 + g 75 -5.8 -4.62302 | gap 1, overlap 531659 GATCCTGTTTTTCCT TTCACCTCA CCT TG-GGTGAA TTTTTCGACATATTC TERM 351 532308 - 532337 + g 70 -7.1 -4.09243 | gap 1, overlap 532311 CCAACAGGGATTTGC CAACCGG-CACTTC AAG GATGCGTCCGGTTG TTTTAGCGACGTCTC atpH 533188 - 532661 - | F0F1 ATP synthase subunit delta atpF 533662 - 533192 - | F0F1 ATP synthase subunit B atpE 534087 - 533782 - | F0F1 ATP synthase subunit C PD0434 534948 - 534151 - | F0F1 ATP synthase subunit A PD0435 535349 - 534978 - | hypothetical protein rpsJ 536660 - 536971 + | 30S ribosomal protein S10 rplC 536986 - 537633 + | 50S ribosomal protein L3 rplD 537643 - 538251 + | 50S ribosomal protein L4 rplW 538248 - 538550 + | 50S ribosomal protein L23 rplB 538562 - 539389 + | 50S ribosomal protein L2 rpsS 539397 - 539666 + | 30S ribosomal protein S19 rplV 539679 - 540014 + | 50S ribosomal protein L22 rpsC 540033 - 540752 + | 30S ribosomal protein S3 rplP 540758 - 541171 + | 50S ribosomal protein L16 rpmC 541171 - 541368 + | 50S ribosomal protein L29 rpsQ 541365 - 541634 + | 30S ribosomal protein S17 rplN 541658 - 542026 + | 50S ribosomal protein L14 rplX 542042 - 542359 + | 50S ribosomal protein L24 rplE 542371 - 542910 + | 50S ribosomal protein L5 rpsN 542927 - 543232 + | 30S ribosomal protein S14 rpsH 543391 - 543789 + | 30S ribosomal protein S8 TERM 352 543990 - 544006 + G 70 -5.1 -4.41548 | overlap 543992 544005 TCATGTTTCTTTGGC TGGTACG GTC CGTGCTA TTTTGTCAAATATGA rplF 543802 - 544329 + | 50S ribosomal protein L6 rplR 544416 - 544775 + | 50S ribosomal protein L18 rpsE 544954 - 545493 + | 30S ribosomal protein S5 rpmD 545513 - 545674 + | 50S ribosomal protein L30 rplO 545681 - 546124 + | 50S ribosomal protein L15 TERM 353 546576 - 546559 - g 70 -6.9 -4.20806 | opp_overlap 546558 546561 546569 CATTGCAAAATCAAA CAGCTCC TGGC GGCGCTG CTGTGGTATATGCTC secY 546132 - 547505 + | preprotein translocase subunit SecY rpsM 547646 - 548002 + | 30S ribosomal protein S13 rpsK 548018 - 548410 + | 30S ribosomal protein S11 rpsD 548425 - 549051 + | 30S ribosomal protein S4 TERM 354 549059 - 549071 + F 74 -3.4 -5.00884 | opp_overlap 549065 549066, overlap 549066 CAAAATAATTTATAT TGGA AATCC TCCA TTTTTTAAAGGAGGT rpoA 549106 - 550104 + | DNA-directed RNA polymerase subunit alpha rplQ 550236 - 550616 + | 50S ribosomal protein L17 PD0463 551384 - 551704 + | hypothetical protein comM 551715 - 553235 + | competence-related protein TERM 355 556595 - 556553 - g 75 -3.7 -4.90266 | gap 2 GCGATTAAGGAAAAA GAATCACTCTTCGGTACCAAT GTT ATCGATAC--AAGTGTGATTC CTTTTATTGATCTTG lip 555782 - 556861 + | triacylglycerol lipase TERM 356 557639 - 557613 - g 83 -6 -4.87273 | gap 1, opp_overlap 557621, overlap 557615 557618 AAGAGCGTATAAAAA TC-CAACAGCA GCAGGA TGCTGTTGTGA AAATTATCCAACTCC lipB 556862 - 557923 + | lipase chaperone vipA 558504 - 559805 + | polysaccharide biosynthetic protein PD0469 561409 - 560948 - | hypothetical protein TERM 357 562437 - 562462 + H 78 -4.9 -4.9725 | opp_overlap 562439 ATTCTCCATTTTATA TATCTATCA CATATTAA TGATAGATA TTTTTATATAAAAAT tig 563318 - 564613 + | trigger factor clpP 564751 - 565377 + | ATP-dependent Clp protease proteolytic subunit clpX 565505 - 566785 + | ATP-dependent protease ATP-binding subunit TERM 358 566871 - 566889 + F 76 -8.1 -4.08271 | GTAAGCTTGCCCGAA TGGCCTC ATAAC GGGGCCA TTGTCTTTTCTGTTG lon 566916 - 569408 + | ATP-dependent serine proteinase La hupB 569629 - 569913 + | histone-like protein TERM 359 569936 - 569899 - f 71 -7 -4.11773 | gap 1 AAAGATGCCGTAAAA TCCTCCGCTG-GCTAGG GGGTG CTTAGCTCAGCGGTAGA GCGTCTCCCTTACAA TERM 360 569988 - 569952 - f 74 -10.7 -3.28712 | GCGTCTCCCTTACAA GGAGAGGGCCGGGGGTT CGA AACCCTCAGCACCCACC AAAGCATTAATGATT TERM 361 570612 - 570653 + G 83 -7.3 -4.59109 | gap 1 GAAGGACGATGTAGC GCAGTTACAGGCTT-CGCCG ACT TGGTGGAAGTCTGCACCTGC TTTTTGGCCAATATC ppiD 570484 - 572451 + | peptidyl-prolyl cis-trans isomerase TERM 362 572569 - 572584 + F 91 -7.5 -5.10208 | opp_overlap 572568 572569 TTATCGAGATTAAAG GGGGC TAAGAT GCCCC TTTTTCTTCGGCTTC manA 573702 - 574739 + | integral membrane protein TERM 363 576156 - 576145 - g 71 -7.2 -4.0274 | TGGATTACCAAAGAA GCGG GTAA CCGC CGTATGCCGTTCGAC nrdA 575941 - 578433 + | ribonucleotide-diphosphate reductase subunit alpha TERM 364 579437 - 579451 + G 74 -11.4 -3.2964 | opp_overlap 579431 TACTGATAACGTCAT GCCCTG GAT CAGGGC TTATGCAGACAATTT nrdF 578511 - 579551 + | ribonucleotide-diphosphate reductase subunit beta TERM 365 579946 - 579968 + GF 93 -12 -3.68073 | CGAACAGATGCCGCA TGGCGAGCGT GAT GCGCTTGCCA TTGTTGAATGGACTG PD0482 579563 - 580045 + | flavodoxin trxA 580017 - 580343 + | thioredoxin rsuA 580749 - 581459 + | ribosomal small subunit pseudouridine synthase PD0485 581456 - 582136 + | hydrolase TERM 366 582383 - 582395 + T 82 -7.7 -4.68132 | overlap 582376 582379 TAGCAGTAGCAGTAG CAGCA TGT TGCTG TTTGTTTCTGTATTG PD0486 583459 - 582902 - | hypothetical protein TERM 367 583014 - 583026 + g 84 -9.1 -4.36914 | GGGAATGCGGCTATC GCGTG ATC CACGC TTTTCTCCCGCAGCA PD0487 583881 - 583456 - | hypothetical protein rpmB 584054 - 584290 + | 50S ribosomal protein L28 rpmG 584304 - 584468 + | 50S ribosomal protein L33 cls 584655 - 586058 + | cardiolipin synthase TERM 368 586290 - 586306 + F 72 -2.9 -4.93877 | GTGTGTTCAGATGAA CATGGGC GGC GGCTATG TTTTCTTTAGTGCAG gst 586440 - 587057 + | glutathione S-transferase mdh 588214 - 587228 - | malate dehydrogenase ppiB 588841 - 588347 - | peptidyl-prolyl cis-trans isomerase TERM 369 588900 - 588886 - H 72 -6.4 -4.24342 | overlap 588887 TTTCGCATGAATAAA GGCGTA GAA TACACC CACGCAGCTTATTGC typA 589082 - 590911 + | GTP-binding elongation factor protein PD0495 591141 - 591413 + | hypothetical protein TERM 370 592430 - 592440 + G 71 -8.2 -3.89435 | opp_overlap 592423, overlap 592423 592422 GGTAGAAACGGAGGC GCGC GGT GCGC TTTCGGTTGTTTCCC cvaA 591657 - 592919 + | colicin V secretion protein PD0497 593144 - 593398 + | hypothetical protein TERM 371 593398 - 593386 - f 75 -6.3 -4.50627 | opp_overlap 593385, overlap 593390 CACCCAGGAAATAAA TCAAG GGA CTTGA ATATTCCCGGTGCTA PD0498 593552 - 593851 + | hypothetical protein TERM 372 594380 - 594368 - f 71 -3.5 -4.74103 | GCGCTAATCTAAAAA TAATT ATA AATTA TTAGGGATAAAGGAG TERM 373 594384 - 594418 + F 73 -2.1 -5.11881 | gap 1 AATTATAAATTATTA GGGATAAAG-GAGTCC ATGA GGTTGCTCTTTGTCCC TTCTTTTTTTTATTT TERM 374 594720 - 594690 - f 80 -12.8 -3.06183 | opp_overlap 594690 594692, overlap 594692 GTTACTTTTACTTAA GATGCTGTTTAC TAACAAT GTAAACAGCATC TCCTTGAAGAATATA TERM 375 594690 - 594720 + F 78 -12.8 -2.72049 | opp_overlap 594690 594692, overlap 594692 GTTACTTTTACTTAA GATGCTGTTTAC TAACAAT GTAAACAGCATC TCCTTGAAGAATATA TERM 376 594718 - 594692 - f 70 -9.6 -3.08996 | opp_overlap 594690 594692, overlap 594690 TACTTTTACTTAAGA TGCTGTTTAC TAACAAT GTAAACAGCA TCTCCTTGAAGAATA TERM 377 594774 - 594808 + F 79 -4.2 -5.24531 | opp_overlap 594756, overlap 594770 594778 GGGGCTTGGGAGCGC CATCGGGCGGTATTAG AAA CTGATACCGTCCTTTA TTTTTTATGGAAAAT TERM 378 594778 - 594804 + F 100 -13.8 -5.13354 | overlap 594770 594774 CTTGGGAGCGCCATC GGGCGGTATTAG AAA CTGATACCGTCC TTTATTTTTTATGGA TERM 379 596673 - 596685 + G 89 -2.7 -5.55664 | TTGCGGGGAGTGTTG CTGAT AAC ATTAG TTTTTTTGATCCTGA cvaB 594983 - 597106 + | colicin V secretion ABC transporter ATP-binding protein TERM 380 597423 - 597439 + T 70 -2.2 -5.05153 | GATTCTGAATATCTT CAACAG CGACA CTGATG TTTATTTTTTGGGGT yadH 598421 - 597642 - | ABC transporter permease protein yadG 599433 - 598501 - | ABC transporter ATP-binding protein TERM 381 600446 - 600460 + G 75 -11.4 -3.43848 | overlap 600445 TGGTGGCGGCGACGT GCCAGG CAA CCTGGC TATTGTTGCGTCTAT TERM 382 601980 - 601963 - g 70 -9.9 -3.38361 | overlap 601967 AAATTCCAATATCAA CCAACCA ATAC TGGTTGG CCGCGAAATATGGCG TERM 383 602685 - 602699 + G 74 -10 -3.73775 | opp_overlap 602684, overlap 602675 GTGGGTGCCAATGAC GGCATG TTG CATGCC TTTGATGCCAATACC TERM 384 603333 - 603351 + G 72 -2.4 -4.86731 | GGGGCCATTGAGCGC TCCACG GGGCGGA TGTGGA TTTTCTTTGGGACAG pilY1 600297 - 603956 + | PilY1 gene product PD0503 604853 - 604365 - | hypothetical protein PD0504 606163 - 605774 - | hypothetical protein hrpB 608939 - 606429 - | ATP-dependent helicase TERM 385 607123 - 607139 + g 77 -7.2 -4.27886 | overlap 607124 AAGCAGGATTCACGC TGCGCC ACCAA GGCGCG TTTATCTGTTTCCCA TERM 386 607466 - 607493 + g 77 -7.7 -4.371 | overlap 607428 AGCGGATGCGCCTTC GCCATTGGTGC GTTGTG GCGTCGATGGC TTTTAGTGTGCTGCG PD0506 609928 - 609440 - | hypothetical protein PD0507 610220 - 612073 + | pathogenicity protein PD0508 612070 - 615891 + | pathogenicity protein TERM 387 615924 - 615934 + F 84 -8.2 -4.57569 | overlap 615923 CTCGGGATCTCTTGC CGCG CAG CGCG TTTTTCAACGGCTGA TERM 388 617085 - 617121 + G 72 -2.2 -4.8622 | gap 1 TATGGCAGATAGGGT GAAGGCTGCTGCCGATG CCCG CACCGAT-GCAACCTTC TTTTTGATTGCCCGG TERM 389 617350 - 617362 + G 74 -7.7 -4.21936 | TTAGAGGCTGTTGGA GTTGC GAT GCAAC TTTTCCCATTATCCG prpB 616651 - 617547 + | 2-methylisocitrate lyase TERM 390 617702 - 617712 + F 72 -3.2 -5.07652 | opp_overlap 617697, overlap 617697 AGATTAACAATAGAA CCAT TGC GTGG TTTTATTTTGACGAC TERM 391 618552 - 618566 + F 71 -7.8 -3.89524 | TCTGGTTTATAGCCA CGTTGC AAA GCAGCG TTTGTCCGATAGGGT PD0511 618736 - 619044 + | hypothetical protein TERM 392 619237 - 619254 + F 70 -4.7 -4.5442 | opp_overlap 619237 AAAACCACAAGGTAA CCGGCCG CTTA CGTTCGG TTTTGTGCTTACCGG TERM 393 619432 - 619419 - f 78 -6.7 -4.72272 | TGCTGGCAGTAAAAA TCGCA ACAC TGCGA CGATTAAAAACGCGT TERM 394 619736 - 619722 - f 71 -7.8 -3.9392 | CCCTACGCCAAACAA CACGCG TTT CACGTG ATGGGCACGACCATG TERM 395 620047 - 620070 + F 72 -10.3 -2.7736 | overlap 620044 GGTCGATACCGTATA CGTACGCCA TTGTTC TGGCGTGCG TAGTTCCGTCTCGCT TERM 396 620651 - 620622 - g 75 -12.1 -2.87881 | opp_overlap 620621 620619, overlap 620624 620626 CAAGCGTCCCAGACA CACACGCTGAGGC TGAA GCCGAAGCGTGTG CTGATGTGTTGGAAA PD0512 620066 - 620839 + | hypothetical protein TERM 397 621032 - 621069 + F 75 -9.9 -3.54436 | gap 1 GCGCCGCAGTGATTG GCCACGACGTATCTATGT ACT GCA-AGGTGCGGCGTGGC TTGTATGCGTGTATG TERM 398 622112 - 622122 + F 80 -6.8 -4.56597 | CGGATATTGTGCTAG CGCT GAC AGCG TTTTTACGCCAGGCG TERM 399 622542 - 622519 - f 79 -11.6 -3.25823 | opp_overlap 622539 GCGCGGGCAGAGGAA GCCGCCGGGC ATCT GCCCGATGGC GCAGTCATCATTGCG TERM 400 623334 - 623360 + F 71 -7.8 -3.86944 | GCTGGAGAGTATCTG GCCCGCATGGGG GTG CCCCAAGAGGAC TTTAATAGTTATGCA PD0514 624314 - 625510 + | hypothetical protein TERM 401 626180 - 626199 + T 81 -3.4 -5.30686 | opp_overlap 626181, overlap 626182 626194 GGGCTTGGCCAATTC AGCGCGGT AATA GCCGCGTA TTTTTTATACGTGTT TERM 402 626182 - 626197 + T 79 -8.2 -4.2748 | opp_overlap 626181, overlap 626180 626194 GCTTGGCCAATTCAG CGCGGT AATA GCCGCG TATTTTTTATACGTG PD0515 627588 - 627190 - | hypothetical protein TERM 403 627268 - 627285 + g 75 -4.1 -4.88918 | AATAAAAGGGATGGC TATGTCG CGTG CGTCATA TTTTCTTTGGAGTAG TERM 404 627768 - 627820 + r 93 -13.9 -3.54489 | gap 2, overlap 627766 GCCTGGAGAGGTGGG CTTGT-ATTG-TTTGTCTCCGAGTG AATCA CACTCGGAGACAAATCAATGATGAG TTGCTTTCGGCTTCC PD0516 628419 - 627889 - | hypothetical protein TERM 405 628318 - 628329 + g 73 -5.8 -4.386 | opp_overlap 628308, overlap 628300 TATCACCGCCGAGGG CGGT AAGA ACCG TTTTGTCCACACTTG rocF 629233 - 630114 + | arginine deaminase TERM 406 631091 - 631107 + G 74 -10.9 -3.61398 | TCCAGTGGTTGGTTT TGCTTCC CGG GGAAGCA TTCTTCCGGCGCGCG TERM 407 631113 - 631140 + G 76 -9 -4.0098 | CGGGGAAGCATTCTT CCGGCGCGCGGC AGCC GTGGTGTGCCGG TTGTTTCGGTTAACG TERM 408 631429 - 631456 + G 82 -5.6 -5.1287 | gap 1 TGATGAAGCCGACTG GCAGTTTC-AGCG ATG CGTTTGAAACGGC TTTTTTCAGTGTCAG TERM 409 632463 - 632478 + G 72 -2.5 -4.88228 | CCGGCTGATGCATTG GTGGG GGTGCG TCCAC TTTTTGATGTTGCCT TERM 410 633293 - 633313 + G 84 -3.1 -5.40072 | opp_overlap 633283, overlap 633294 CATTACCGGCTTCCC GGTGCCGGA TGC TGCGGCGCA TTTTTTTGCCCAACG PD0518 630612 - 635537 + | hypothetical protein lipP 636620 - 635643 - | lipase attO 636874 - 637731 + | AraC family transcriptional regulator TERM 411 637867 - 637840 - T 74 -8.5 -3.90112 | opp_overlap 637863, overlap 637856 TTTTGTCTAATCAAA GACACCACACT ACATAG AGTATGGCGTC TGCGGTACTCAGGGG PD0521 638182 - 637907 - | hypothetical protein TERM 412 638956 - 638969 + G 74 -2.4 -5.0133 | opp_overlap 638940 638963 CATGCTCAGGCTGAA GCAA GCACGA TTGC TTTTTTACAGCAATG orn 638680 - 639261 + | oligoribonuclease TERM 413 639414 - 639443 + T 86 -11.5 -3.76373 | gap 1, overlap 639418 TTGGTTGGGACGTGA GTGACACCCACCCC CTG GGCGTGGGTGT-AC TTTCAATGTTGGCAG TERM 414 639418 - 639440 + T 82 -13.4 -2.974 | overlap 639414 TTGGGACGTGAGTGA CACCCACCCC CTG GGCGTGGGTG TACTTTCAATGTTGG yggB 640402 - 639485 - | small conductance mechanosensitive ion channel ppsA 642778 - 640403 - | phosphoenolpyruvate synthase TERM 415 640532 - 640570 + g 70 -3 -4.68103 | ATCGGATGGGCCTTG GCCGCAGATTCCAATGTA TTT TCCCTTGGAACGTGCCGC TTTTATTGCCATTGA TERM 416 640970 - 640982 + g 74 -3.3 -4.95547 | overlap 640971 GCTGGCACCGCGGAA GCCGA GCA TCGGG TTTTCTTCTTGTGGC TERM 417 641535 - 641569 + g 70 -9.3 -3.767 | gap 1, opp_overlap 641519 641518 641557 641558, overlap 641518 641534 641567 GCGGCGTGGCAGGTA CGT-CCGCCGCGATTG GTGA CAATCGCGCTGGCGCG TTTCATGACTGGCTC PD0525 642894 - 643748 + | hypothetical protein PD0526 643846 - 644331 + | hypothetical protein mutT 644399 - 644887 + | 7,8-dihydro-8-oxoguanine-triphosphatase TERM 418 645292 - 645281 - T 89 -4.4 -5.76949 | GATGCCTAAAAAAAA CATG AATA CATG AATAAAAAAAGAGAG TERM 419 645324 - 645303 - T 100 -15.9 -5.85737 | opp_overlap 645301 645300 ACATGAATAAAAAAA GAGAGCCGC ATGT GCGGCTCTC AAGTTTGTATTGCAT PD0528 647570 - 645369 - | hypothetical protein TERM 420 647601 - 647620 + r 71 -10.8 -2.7094 | overlap 647600 TTTTGCGGTTGTCAG CCAGTGAT TGCA ATCACTGG GTTGTATCCATGACG TERM 421 648272 - 648248 - R 100 -18.6 -2.72379 | overlap 648232 CTAAGCTCGCAACTA CTCCGGCGGC GATGT GCCGCCGGAG TGAAAAACGTACCTC guxA 650217 - 648286 - | cellulose 1,4-beta-cellobiosidase TERM 422 651443 - 651459 + r 74 -7.3 -4.2717 | CTATGATGGATCGAT TCAGTCT TAG AGGCTGA TTTTGATGCGATGGT lipA 652545 - 651424 - | lipoyl synthase lipB 653271 - 652582 - | lipoyltransferase PD0532 653537 - 653259 - | hypothetical protein PD0533 654502 - 653702 - | hypothetical protein phaF 655016 - 655537 + | poly(hydroxyalcanoate) granule associated protein PD0535 656359 - 657678 + | hypothetical protein TERM 423 657867 - 657857 - T 76 -4 -4.93296 | opp_overlap 657857 TGAGTAGTATAAAAA GATT TGA AATC GTTGCTATTCACTCA tlyC 659724 - 658378 - | hemolysin TERM 424 659260 - 659247 - G 74 -9.5 -3.76373 | overlap 659241 TGGCCAATACCCAAA CGCCG GGTG CGGCG ATGCGCGCTAACACG TERM 425 660378 - 660401 + r 90 -9.7 -4.52857 | opp_overlap 660378 660382 TGAGCGGTCAAGTCA GCAATACTC TGGAAT GAGTATTGC TTTTATGTCGCAAGT PD0537 661984 - 660458 - | carboxypeptidase related protein PD0538 662187 - 662420 + | hypothetical protein TERM 426 662467 - 662481 + T 75 -2.8 -5.26918 | GATGGTTGTGCATCG CAAATG ACA CATTCG TTTTTTGTGCAGTGT parE 664492 - 662603 - | DNA topoisomerase IV subunit B PD0540 664526 - 664966 + | hypothetical protein TERM 427 664990 - 665015 + F 100 -17.6 -4.26881 | overlap 664986 TTTAGTTACTGCGTT GACGCCCCGG ATGATC CCGGGGCGTC TTTAGTTTTGTGCCC TERM 428 665714 - 665681 - g 70 -3.1 -4.7033 | gap 1, opp_overlap 665685, overlap 665682 665685 GAACTCAAGACAAAA CCG-ACGCAGCATTCT GTC AAAGAGCTGCGTTCGA TCGGTATTCAGCCGG pyrG 665117 - 666781 + | CTP synthetase kdsA 666942 - 667772 + | 2-dehydro-3-deoxyphosphooctonate aldolase TERM 429 667761 - 667749 - f 100 -9.1 -5.14563 | opp_overlap 667756 GCGGTCACCAAAAAA CGAGG TTT CCTCG AGCAGGATTGAATCA eno 668223 - 669515 + | phosphopyruvate hydratase ftsB 669519 - 669875 + | cell division protein FtsB ispD 669872 - 670567 + | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase ispF 670588 - 671094 + | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase PD0547 671873 - 671331 - | hypothetical protein TERM 430 672309 - 672338 + r 100 -18.1 -5.02606 | opp_overlap 672306 CATATCCATACATTT CTATCGTTAAGGC ATGC GCCTTAACGATAG TTTTATTATTTAGTG PD0548 673371 - 672355 - | gluconolactonase etfD 675177 - 673531 - | electron transfer flavoprotein ubiquinone oxidoreductase TERM 431 673861 - 673872 + g 74 -2.2 -5.13527 | CGGTAAGGTGCGTTG TACG TAGT CGTG TTTTGTTTGTTGGTT alkB 675267 - 675869 + | alkylated DNA repair protein PD0551 676705 - 676064 - | hypothetical protein PD0552 677628 - 676702 - | ABC transporter permease PD0553 678471 - 677632 - | ABC transporter ATP-binding protein TERM 432 677673 - 677722 + g 93 -11 -4.40173 | gap 4, overlap 677675 GTGCTGTACGCGCAG CA-CG-CC-CCCGTGG-TCCGTGA AAATAC TCACGGATCCACGGGTGGTCGATG TTTTCAATTTCTGCT TERM 433 677675 - 677719 + g 81 -13.8 -2.86695 | gap 3, overlap 677673 GCTGTACGCGCAGCA CG-CC-CCCGTGG-TCCGTGA AAATAC TCACGGATCCACGGGTGGTCG ATGTTTTCAATTTCT yrbE 679586 - 678468 - | ABC transporter permease PD0555 679696 - 680958 + | hypothetical protein PD0556 681323 - 681541 + | hypothetical protein TERM 434 682187 - 682217 + F 100 -10.6 -5.24647 | gap 1 TGTGGCTTTGTTCTG GCCCCTTC-ATAG TCGATT CTATTGAAGGGGC TTTTCTTTTGTATAT TERM 435 683054 - 683095 + F 77 -12 -2.91912 | opp_overlap 683061 683064, overlap 683061 GGAACATTGATTCGT GAGAGAATAATATATCCT TATGCT AGGATATATTATTTTTTC TCTGTGAATGAATGA TERM 436 683061 - 683088 + F 100 -8.7 -5.4251 | opp_overlap 683061 683064, overlap 683054 TGATTCGTGAGAGAA TAATATATCCT TATGCT AGGATATATTA TTTTTTCTCTGTGAA TERM 437 683447 - 683436 - f 83 -4.4 -5.28942 | opp_overlap 683443, overlap 683443 GAGTTTAAAGAAAAA GAAG CATC CTTC TAATAAGGTCGTTGG TERM 438 683572 - 683600 + F 70 -2.5 -5.06016 | gap 1, opp_overlap 683572, overlap 683567 683578 ATGGCTTTTTTAAAA CAG-ATCCTCTC ATCACA GAGAGTATGCTG TTTTCTTTCTATCAT TERM 439 684587 - 684601 + F 72 -8.6 -3.7732 | TGTTTTTTCCTTGCT TGCATC GGG GATGCA TTGTTAATCTAGGCG mreB 684665 - 685744 + | rod shape-determining protein mreC 685942 - 686892 + | rod shape-determining protein mreD 686889 - 687374 + | rod shape-determining protein mrdA 687358 - 689442 + | penicillin-binding protein 2 mrdB 689439 - 690560 + | rod shape-determining protein queA 690656 - 691699 + | S-adenosylmethionine:tRNA ribosyltransferase-isomerase relA 692427 - 694583 + | ATP:GTP 3'-pyrophosphotranferase TERM 440 695664 - 695679 + G 76 -11.8 -3.10796 | GCTGAGTTGTCGTTA GCGCGC GCGC GCGCGC TGTTGCCTGATCAAG PD0564 694818 - 696221 + | hypothetical protein PD0565 697234 - 696731 - | hypothetical protein minE 697554 - 697297 - | cell division topological specificity factor MinE minD 698366 - 697557 - | septum site-determining protein minC 699119 - 698403 - | septum formation inhibitor PD0569 699713 - 699135 - | hypothetical protein PD0570 700116 - 701303 + | hypothetical protein TERM 441 701335 - 701361 + F 100 -16.6 -3.58801 | overlap 701338 GTCGTGATGTTGTTG GAACGTGCAGCG TTG CGCGGCACGTTC TTTCAACCCTTCTAT TERM 442 701338 - 701358 + F 95 -12.5 -3.9243 | overlap 701335 GTGATGTTGTTGGAA CGTGCAGCG TTG CGCGGCACG TTCTTTCAACCCTTC PD0571 701431 - 701640 + | hypothetical protein TERM 443 702167 - 702197 + G 86 -12.7 -3.73224 | opp_overlap 702171 ATGATTTAGGGGTAC GCAAGGGTATCCA GCGTG TGGATAGCCTTGC TTTCGTCCCGACTCC alkA 701692 - 702342 + | DNA-3-methyladenine glycosidase TERM 444 702665 - 702633 - T 70 -4.8 -4.52589 | overlap 702636 GTGTCGCACATAAAA GAACGGCGGACC CGACGAGGC AGTCCGCCGCTT GAGGGCATGTAGCGA TERM 445 702662 - 702636 - T 81 -8.7 -4.38141 | overlap 702633 TCGCACATAAAAGAA CGGCGGACC CGACGAGGC AGTCCGCCG CTTGAGGGCATGTAG PD0573 703253 - 702684 - | hypothetical protein TERM 446 702981 - 702967 - G 80 -4.2 -5.03314 | opp_overlap 702966, overlap 702968 CTTACGTTGAAAAAA TCTGCA CTT TGCAGG GTTGAGTCACGGTCC cybB 703837 - 703271 - | cytochrome B561 PD0575 704554 - 703850 - | hypothetical protein TERM 447 704280 - 704290 + g 70 -6.8 -4.20918 | opp_overlap 704274 704286 TCGAGCAATCCTTGC GCCA AAG TGGC TTTGTTCCACTTGGC TERM 448 704927 - 704947 + G 74 -6.8 -4.23529 | gap 1 TGATCCAGGCTCATT GCC-GGGCG ACTC CGTCCTGGC TTTGTATATTGATGT PD0576 704664 - 708236 + | histidine kinase/response regulator hybrid protein dcm 709463 - 708396 - | site-specific DNA-methyltransferase PD0578 710152 - 709460 - | hypothetical protein TERM 449 709662 - 709652 - G 71 -8.2 -3.86015 | GAGTTGTTTCACAAA GGCC AGT GGCC CTAGGTCATTCCGAA PD0579 711294 - 710194 - | hypothetical protein TERM 450 710638 - 710611 - G 86 -7 -5.08824 | gap 1, opp_overlap 710612, overlap 710612 GCTGTAGGCAAAAAA CCGCGAG-ACAAG TTC CTCGTGCTCGCGT TCCTTAAAATTCTTT TERM 451 710637 - 710612 - G 76 -10.5 -3.64812 | gap 1, opp_overlap 710612, overlap 710611 CTGTAGGCAAAAAAC CGCGAG-ACAAG TTC CTCGTGCTCGCG TTCCTTAAAATTCTT TERM 452 711259 - 711275 + g 77 -3.7 -5.02421 | GGACTTGATCTCTTC GGACT TGATAAC AGTCC TTTCTTTTTGCTTTT hemE 712488 - 711424 - | uroporphyrinogen decarboxylase aroB 713976 - 712864 - | 3-dehydroquinate synthase aroK 714515 - 713973 - | shikimate kinase pdxH 714747 - 715373 + | pyridoxamine 5'-phosphate oxidase glnS 717366 - 715624 - | glutaminyl-tRNA synthetase TERM 453 716334 - 716324 - G 72 -4 -4.68593 | opp_overlap 716324 TCTAGTACTGAAAAA TCAA TGA TTGA GTTCTGTTTGCTGAT PD0585 717819 - 718058 + | hypothetical protein cutC 718055 - 718858 + | copper homeostasis protein PD0587 719116 - 719412 + | hypothetical protein TERM 454 720346 - 720332 - g 75 -11.4 -3.34947 | opp_overlap 720323 TAAGAATGCGGATAA GCACGG TAA CCGTGC GGTGGCTGAGGCGTA sbp 719556 - 720575 + | ABC transporter sulfate binding protein cysU 720579 - 721439 + | ABC transporter sulfate permease cysW 721436 - 722395 + | ABC transporter sulfate permease TERM 455 722921 - 722939 + G 72 -12.4 -2.75382 | overlap 722914 GCTGGATGCGCAGGT GCGGCGTG ATT TACGCCGC TGGTTGCGTGAGATC cysA 722409 - 723455 + | sulfate ABC transporter ATP-binding protein TERM 456 723627 - 723641 + T 76 -8.6 -4.09321 | GCAATCAAGTCGTTT CAAACG CTA CGTTTG TTATTTAATTCAGTG htrB 724627 - 723680 - | lipid A biosynthesis lauroyl acyltransferase rpoD 724988 - 726859 + | RNA polymerase sigma factor RpoD parC 729670 - 727421 - | DNA topoisomerase IV subunit A yybA 730012 - 730458 + | MarR family transcriptional regulator PD0596 731019 - 731231 + | hypothetical protein bioH 732023 - 731256 - | biotin biosynthesis protein bioF 733385 - 732180 - | 8-amino-7-oxononanoate synthase ctaA 733940 - 735103 + | cytochrome oxidase assembly protein TERM 457 735227 - 735246 + G 75 -5.8 -4.64657 | gap 1 CCAGTGTTGTGCAGA TCCAGAGTG GGG CACT-TGGA TTTTTAGGCATTTGG cyoE 735100 - 736011 + | protoheme IX farnesyltransferase cca 739124 - 737874 - | multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase TERM 458 738721 - 738702 - G 93 -13.6 -3.86822 | CAACCGTGCCATAAA GCGTGCTG CACG CAGCACGC GCAACGGGTCCTCGG TERM 459 738904 - 738924 + g 71 -4.5 -4.62783 | opp_overlap 738906, overlap 738905 738906 TCAGCGTTGACGATA AAGCCGCGG TAG CCGTGGCCG TTTTTGCGCTCGGTA TERM 460 738922 - 738906 - G 76 -9.3 -3.96327 | opp_overlap 738906 738905 738904 AGCGTTGACGATAAA GCCGCGG TAG CCGTGGC CGTTTTTGCGCTCGG slt 741349 - 739217 - | soluble lytic murein transglycosylase precursor TERM 461 739332 - 739350 + g 87 -8.1 -4.62622 | opp_overlap 739332 CTAAAAGCAAGCACA CGCGCGA CATAT TCGCGTG TTTCTTTGTAGTTGA TERM 462 740991 - 741007 + g 70 -6.5 -4.183 | overlap 740994 TTGGCGTATTCGATC CAGCCGT ATA ACGGATG TTTGTTCAGAGTTGC psd 742789 - 741908 - | phosphatidylserine decarboxylase PD0605 743214 - 742786 - | truncated cytochrome C oxidase TERM 463 743124 - 743140 + g 70 -6.5 -4.12226 | GCGGGCGTTGTGTTT CAGGAAG GTT CTCCCTG TGTTTTTCTGCTTGT TERM 464 743226 - 743212 - G 79 -2.8 -5.15969 | opp_overlap 743212, overlap 743217 GGTGAAGCCAAAAAA CATGAG GGT CTAATG TCCCTTCAGAGTATT yfcB 743519 - 744445 + | N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase aroC 744457 - 745575 + | chorismate synthase asd 746217 - 747251 + | aspartate-semialdehyde dehydrogenase TERM 465 748833 - 748859 + G 82 -5 -5.03314 | overlap 748830 GGTTGTTGCTTTTCC TCACACTGCTGC TGT GTCGCGGAGTGA TTTTTTAGAGATGCC PD0609 747289 - 749220 + | hypothetical protein TERM 466 749233 - 749221 - f 70 -9.1 -3.40784 | opp_overlap 749221 AATCAAATTGCATAA CAGGC TCT GCCTG TCGGTTAAGCTCCAG TERM 467 749517 - 749557 + GF 91 -11.2 -4.31692 | gap 1, overlap 749552 ACGACACGGTTACCA TCCTCGG-TGGCGGTACGT TGGT GTGTGCCGACATCCGAGGA TTTTCATGCTCGCTT truA 749259 - 750035 + | tRNA pseudouridine synthase A TERM 468 750260 - 750238 - gf 71 -7 -4.17048 | overlap 750252 CCTCTTCCAAAATAA CAGCGCAGAT GAG ATCCACACTG TGGTGCGCACGGTAC trpF 750005 - 750694 + | N-(5'-phosphoribosyl)anthranilate isomerase trpB 751196 - 752413 + | tryptophan synthase subunit beta trpA 752539 - 753345 + | tryptophan synthase subunit alpha TERM 469 753604 - 753618 + T 77 -11.4 -3.2963 | ATAGCTTGCTTCCAG CGCCTG ATC CAGGCG TTCTACGGCGATGAT radA 754977 - 753586 - | DNA repair protein RadA TERM 470 753932 - 753955 + g 73 -5.2 -4.63218 | opp_overlap 753933, overlap 753933 CCGTGACGATGCAAT ACGGCTAACA GCAT TGCTAGCCGA TTTTGTTCCAGCCCG TERM 471 755820 - 755859 + G 71 -6.4 -4.2461 | gap 1, overlap 755822 TGAGGCGACAGTGCA CATGCATACTGCGGAACGC TTG GCGATTCGCCGT-TGCATC TTTGTTGCTAAGACT TERM 472 755822 - 755857 + G 70 -9 -3.72374 | gap 1, overlap 755820 AGGCGACAGTGCACA TGCATACTGCGGAACGC TTG GCGATTCGCCGT-TGCA TCTTTGTTGCTAAGA PD0615 755155 - 756120 + | luciferase PD0616 756800 - 756321 - | hypothetical protein recQ 758725 - 756923 - | ATP-dependent DNA helicase TERM 473 757758 - 757772 + g 79 -12.8 -2.88023 | overlap 757761 GCAGCTTCGCCATCG CGGCCG GCG CGGCCG GTTTCCTGGTAATAA TERM 474 757761 - 757773 + g 80 -10.5 -3.80573 | overlap 757758 GCTTCGCCATCGCGG CCGGC GCG GCCGG TTTCCTGGTAATAAC dps 759403 - 758906 - | DNA-binding related protein TERM 475 759366 - 759408 + g 93 -9.3 -4.78839 | gap 1 TCGCTATTCTTGATC CCGATATTGACGTCTGGCAT TGAG ATGGCAGATGCCAAT-TCGG TTTTGTTCTCGGATT TERM 476 762000 - 762015 + G 83 -6 -4.84673 | overlap 761998 AGGGAGATTTTCAGG CGCCGC GCCA GCGCCG TTTTATGTTGTTTCC TERM 477 762877 - 762895 + G 74 -3.1 -4.87273 | overlap 762844 TTCGGCCGATGAGAT GCGTG GTGAGTTGG CACGC TTTTTGTCGCGTATT TERM 478 763472 - 763484 + G 85 -4.7 -5.24129 | overlap 763455 CAGTGCCGTGATGTG GCGGC GCA GCAGC TTTTTTCTGAGGCGA hrpA 759542 - 763942 + | ATP-dependent helicase TERM 479 765731 - 765744 + G 87 -8.1 -4.58395 | overlap 765728 TGCCAGCGGGGTTGT TGCGC AGCA GCGCA TTTTTGACGCATCCC gcvP 764308 - 767289 + | glycine dehydrogenase TERM 480 767554 - 767573 + T 72 -4.9 -4.72201 | overlap 767560 GATCAGCTAAGTACG TGGCCGC AATGGG GAGGCCA TTGTTTTTTGTCCCA TERM 481 767560 - 767576 + T 85 -6.6 -5.24531 | overlap 767554 CTAAGTACGTGGCCG CAATGG GGAGG CCATTG TTTTTTGTCCCAGAT TERM 482 767730 - 767710 - T 100 -8.9 -5.19212 | opp_overlap 767710 ATGAGCATTAAAAAA GGCCCCAAA TGA TCAGGGGCC TTTTAAGTGAGTTGT TERM 483 767710 - 767730 + T 74 -6.8 -4.21676 | opp_overlap 767710 ATGAGCATTAAAAAA GGCCCC AAATGATCA GGGGCC TTTTAAGTGAGTTGT cyoD 768096 - 767755 - | cytochrome O ubiquinol oxidase subunit IV cyoC 768704 - 768096 - | cytochrome O ubiquinol oxidase subunit III cyoB 770707 - 768710 - | cytochrome O ubiquinol oxidase subunit I cyoA 771660 - 770701 - | cytochrome O ubiquinol oxidase subunit II ispB 773130 - 772129 - | octaprenyl-diphosphate synthase ssb 773381 - 773875 + | single-strand DNA-binding protein TERM 484 775563 - 775577 + G 74 -10 -3.65084 | CAGGATGAATGTGGG CGCTGT GAT ACAGCG TTTCCAAATTTCATT ubiG 775524 - 776435 + | 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase napA 776736 - 777944 + | Na+/H+ exchange protein gloA 778632 - 778105 - | lactoylglutathione lyase TERM 485 780118 - 780136 + r 74 -10.2 -3.19371 | opp_overlap 780115 780118 CAGAGGAAAAATGGA CCGTTCCC AAA GGGTACGG TTGGATTCAATCAAT TERM 486 780136 - 780118 - R 72 -10.2 -2.87672 | opp_overlap 780118, overlap 780115 CAGAGGAAAAATGGA CCGTTCCC AAA GGGTACGG TTGGATTCAATCAAT ptsA 781936 - 780209 - | phosphotransferase system enzyme I TERM 487 780867 - 780878 + g 78 -5.8 -4.80178 | overlap 780823 CGTATCCCACGCAGG CCCA TTGC TGGG TTTTCTTCGTTACTG ptsH 782266 - 781997 - | phosphotransferase system HPr enzyme PD0633 782651 - 782259 - | sugar transport protein PD0634 783896 - 783024 - | hypothetical protein ptsK 784843 - 783893 - | HPr kinase/phosphorylase PD0636 785426 - 785109 - | sigma-54 modulation protein rpoN 786905 - 785517 - | RNA polymerase factor sigma-54 yhbG 787669 - 786947 - | ABC transporter ATP-binding protein PD0639 788199 - 787669 - | hypothetical protein PD0640 788746 - 788177 - | hypothetical protein TERM 488 788523 - 788503 - G 85 -6.7 -4.91109 | opp_overlap 788503 788518 CGGGGATCATAAAAA GTGGGGCGG TCA CCTCCGCAC TGCTGTCGGTCTGAT PD0641 789291 - 788743 - | hypothetical protein kpsF 790310 - 789309 - | polysialic acid capsule expression protein TERM 489 789383 - 789394 + g 70 -3 -4.72029 | opp_overlap 789383 GCGGATCGACCACAA TCAA ACCA TTGA TTTTATTGGCTTCCA PD0643 790372 - 790599 + | hypothetical protein murA 790669 - 791946 + | UDP-N-acetylglucosamine 1-carboxyvinyltransferase PD0645 791943 - 792245 + | hypothetical protein PD0646 792830 - 792255 - | hypothetical protein lpxD 793053 - 793970 + | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase PD0648 793942 - 794343 + | hypothetical protein PD0649 794686 - 794447 - | hypothetical protein purL 798655 - 794687 - | phosphoribosylformylglycinamidine synthase TERM 490 795900 - 795885 - G 72 -11.8 -2.70022 | overlap 795884 GCCATTTCACACAAT GCGGCG AATG CGCCGC CATCGCTGCGGTCGT dsbC 799640 - 798852 - | disulfide isomerase TERM 491 799326 - 799340 + g 95 -2.8 -5.80951 | opp_overlap 799320, overlap 799337 GTAGGAAAGCAGCCC TTCGCT GAC AGCAAA TTTTTTGTTTTGAAT xerD 800746 - 799772 - | site-specific tyrosine recombinase XerD PD0653 801897 - 801004 - | ion transporter argD 801965 - 803200 + | bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein gshI 804963 - 803599 - | glutamate-cysteine ligase precursor engB 805794 - 805183 - | GTPase EngB TERM 492 806398 - 806414 + r 72 -6.5 -4.36931 | opp_overlap 806398 ACCTTTTACTCAAAG CGCTGTC AAG GATGGCG TTTTGATCTGCATTG TERM 493 806704 - 806680 - R 70 -9.2 -3.31691 | overlap 806676 806671 806681 GACAAACACCATGAA TCGCCCCTCC TGTTT GGAGGGACGG CCCAAATGAGTCACA TERM 494 806703 - 806681 - R 78 -12.7 -2.58292 | overlap 806680 806676 806671 ACAAACACCATGAAT CGCCCCTCC TGTTT GGAGGGACG GCCCAAATGAGTCAC PD0657 807683 - 806748 - | hypothetical protein dsbA 808535 - 809182 + | thiol:disulfide interchange protein TERM 495 809230 - 809245 + F 70 -9 -3.31853 | CATGATCACCGACAT GCTGAC TGTG GTCAGC TTCACTTTCACTTTC TERM 496 809494 - 809484 - g 70 -6.8 -4.08216 | CCATCTGGGCCAAAA CCAG TGG CTGG TACGGATTATGTTGT dsbA 809274 - 810056 + | thiol:disulfide interchange protein TERM 497 810309 - 810325 + G 79 -7.9 -4.45544 | overlap 810310 810311 AATCAGACGTGCTAT TTGGCGC AGC GCGCCGG TTTTCATTACTGGAG PD0660 810102 - 810842 + | hypothetical protein PD0661 811564 - 810950 - | hypothetical protein trmU 812700 - 811561 - | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase mutT 813155 - 812697 - | dNTP pyrophosphohydrolase clpS 813335 - 813655 + | ATP-dependent Clp protease adaptor protein ClpS clpA 813788 - 816064 + | ATP-dependent Clp protease subunit infA 816631 - 816413 - | translation initiation factor IF-1 aat 817479 - 816748 - | leucyl/phenylalanyl-tRNA--protein transferase PD0668 818627 - 817491 - | hypothetical protein trxB 820020 - 819055 - | thioredoxin reductase ftsK 820289 - 822643 + | cell division protein PD0671 822828 - 824738 + | hypothetical protein lolA 825300 - 825926 + | outer-membrane lipoprotein carrier protein TERM 498 826379 - 826390 + G 78 -5.8 -4.82901 | overlap 826374 826377 TCAGATCTTGGCTGA CGCT GCGC AGCG TTTTTCTGAAGGACG PD0673 826068 - 827429 + | recombination factor protein RarA TERM 499 827896 - 827906 + G 74 -3.2 -4.9755 | CGTTCCGAGCGCTCG CTGA TAG TCGG TTTTTACTTATGTAT PD0674 827590 - 827991 + | transmembrane protein PD0675 828665 - 830161 + | histidine kinase/response regulator hybrid protein TERM 500 830352 - 830365 + G 89 -3.1 -5.52986 | gap 1, opp_overlap 830352 TTGAGTCAGGCAGAA GC-TGC ATT GCACGC TTTTTTTGGTGAAGT folK 830202 - 830810 + | 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase ptr1 831558 - 830821 - | pteridine reductase TERM 501 832446 - 832478 + G 100 -14.1 -4.08767 | CGTGCCGAGTATTAC CGTCCTGAGCGTGAC ACT GGCACCCTCAGGGCG TTTTACCGGCATCGC TERM 502 832570 - 832585 + G 74 -6.8 -4.3586 | overlap 832566 CCGCCTTGGCCGAAG CCGGCA CCGC TGCTGG TTTTGATATGGCTGG PD0678 831639 - 832823 + | hypothetical protein PD0679 832811 - 833227 + | hypothetical protein glk 834251 - 833247 - | glucokinase TERM 503 834761 - 834735 - H 95 -13 -3.72695 | overlap 834736 ACGCTGCGGATCAAA GCTGACCAACCG GGG CGGTTGGCCAGA CACTTCGCAATGGGC TERM 504 834760 - 834736 - H 100 -16.5 -2.83403 | overlap 834735 CGCTGCGGATCAAAG CTGACCAACCG GGG CGGTTGGCCAG ACACTTCGCAATGGG TERM 505 835915 - 835944 + G 72 -3.5 -4.731 | overlap 835906 835917 GTTTTCTATCGGTGC GGCACTGACGCAT GGGT ATGTATCGGTGGC TTTTGTTGCTGCATT gluP 834944 - 836233 + | glucose/galactose transporter TERM 506 836768 - 836796 + G 74 -3.2 -4.86731 | gap 2 GAGATTACCGAGCAT CTGATCCAGCTTGG ACA CCA-GC-GGATTGG TTTTCTTTGGGGGGG PD0682 836237 - 837313 + | LacI family transcription regulator TERM 507 838218 - 838241 + G 86 -9.6 -4.33417 | gap 1, overlap 838221 TTTGCCCGTTGGGGT GGC-CGCACAC CCG GTGTGTGCGCC TTTGTTGTCGATCCA glmS 837310 - 838350 + | glucosamine--fructose-6-phosphate aminotransferase nagA 838347 - 839507 + | N-acetylglucosamine-6-phosphate deacetylase TERM 508 840655 - 840677 + G 72 -2.6 -4.94811 | CGCGCGCTGTGGAGG CGGCCATTGA GCA TAAGTGTCCG TTTGTTTGTTTTTCC accD 840198 - 841094 + | acetyl-CoA carboxylase subunit beta TERM 509 841412 - 841432 + G 86 -3.9 -5.41143 | overlap 841414 GCATCCCACAATCCT CATGATGAC AAT GGCATCAAG TTTTTTTCCGCGATG TERM 510 841978 - 841996 + G 80 -10.2 -3.91897 | TTTAGAGCAGGCGTT GGGGACCC TTG GGATCCCC TTTATACGTGCGAGG mrsA 841091 - 842437 + | phosphomannomutase PD0687 843380 - 842526 - | Shf protein murG 844507 - 843377 - | UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol bedB 845364 - 845035 - | benzene 1,2-dioxygenase, ferredoxin protein TERM 511 845291 - 845303 + g 73 -5.5 -4.54727 | overlap 845292 GGGGTGCCGGTGATG TCGTC GCA GACGG TTTTCATTTCGCCGG csdB 846718 - 845468 - | selenocysteine lyase sufD 847974 - 846706 - | ABC transporter membrane protein TERM 512 847079 - 847042 - G 79 -11.2 -3.73072 | AATGCCGCCATGAAA TACGACGCGGCTGCGG TCGGTT CCGATGCCGCGCCATA GCAGTTCGCTTGCCG TERM 513 847625 - 847641 + g 88 -10.1 -4.38447 | TGTTTGAAATGGGGG GGGCTGC GGT GCAGTCC TTTGTCTTGTTCTCT ynhD 848810 - 847974 - | ABC transporter ATP-binding protein ynhE 850414 - 848957 - | cysteine desulfurase activator complex subunit SufB TERM 514 849515 - 849535 + g 79 -11.1 -3.73072 | overlap 849527 GATTACTTTGCTGCG CGCGCCG CGGCATT CGGCGCG TTTGGTGACGAAGTT TERM 515 849580 - 849590 + g 75 -6.8 -4.4009 | GGCCTGCTTCGTCGC CTGG GTA CCAG TTTTGTACGGTGGAG PD0694 850896 - 850435 - | hypothetical protein PD0695 851108 - 851527 + | hypothetical protein TERM 516 852453 - 852440 - g 74 -9.5 -3.74693 | GCCCATGCGATCAAA GCGCC GTTT GGCGC AATCCGCAATGATAA ptrB 852374 - 854485 + | dipeptidyl aminopeptidase TERM 517 854522 - 854534 + G 70 -5.5 -4.38203 | GTTGTTGCATGTTGT GATGC TTG GCGTC TTTCTTCATTGTATG PD0697 854492 - 854800 + | hypothetical protein TERM 518 854904 - 854920 + G 71 -10.8 -3.23598 | overlap 854897 TGCGTGATGGGACAC CGCCGC CGGAT GCGGCG TTGGTCGCTTGGTTG dapF 854837 - 855664 + | diaminopimelate epimerase PD0699 855652 - 856332 + | hypothetical protein xerC 856356 - 857240 + | site-specific tyrosine recombinase XerC hslV 857829 - 858380 + | ATP-dependent protease peptidase subunit ubiE 861678 - 862439 + | ubiquinone/menaquinone biosynthesis methyltransferase TERM 519 862549 - 862529 - f 72 -5.4 -4.42386 | opp_overlap 862522 862530, overlap 862530 GGGTGAGGCAGAAAA TTGCGCTT GAGTG AAGCGCAT CATCTGTTTTTGGAT TERM 520 862605 - 862628 + F 91 -2.3 -5.82036 | GTGGCGGCAATCAGT GCGCGTTTC CCTTTT GTGATGCGC TTTTTTATTTGTTGT TERM 521 863201 - 863214 + G 81 -6.7 -4.68724 | CCGGCGATGACGGAG GGCAA ACGC TTGCC TTTTATGTTCAGTCA pepN 862796 - 864661 + | aminopeptidase N PD0706 865187 - 865828 + | hypothetical protein TERM 522 865826 - 865841 + T 86 -4 -5.57054 | gap 1, opp_overlap 865825 865826 865829, overlap 865829 GTGCCTTCAAAGAAT TGAGAGG CGC CCTC-CA TTTTTTTAGATTCTT PD0707 866583 - 866104 - | MarR family transcriptional regulator TERM 523 866193 - 866206 + g 72 -2.3 -4.84274 | opp_overlap 866193 CCTTTTCGGAAAGAA CCGAC ATGA GTCTG TTTTTCATATCATTA TERM 524 868314 - 868301 - g 75 -3.8 -4.87893 | opp_overlap 868301 AATGGCAAGCAAAAA GCAG AAATTG CTGC TTTAATCATGGTAAA PD0708 868118 - 868534 + | virulence regulator TERM 525 868655 - 868665 + T 72 -3.2 -4.95854 | overlap 868658 TGGTTTGAGTTGGTG TCCT TAA AGGG TTTTTAAATTTTTTC TERM 526 869183 - 869194 + T 79 -3 -5.27769 | overlap 869174 TCTTGAGAAACGTTT TTCT TATA AGAA TTTTTCATTTTTTAT PD0709 870730 - 869843 - | hypothetical protein PD0710 871228 - 870782 - | hypothetical protein TERM 527 870944 - 870955 + g 75 -5.8 -4.5774 | CGGCACGTTACGTTG CTGG CTTA CCAG TTTTCCTTGTTCATC yncD 871760 - 873811 + | TonB-dependent receptor PD0712 874142 - 874234 + | transposase PD0713 875282 - 874497 - | hypothetical protein cysH 876377 - 875664 - | phosphoadenosine phosphosulfate reductase TERM 528 875842 - 875866 + g 79 -7.2 -4.3898 | TCCCAGATATCACGG TCGGTCCAGT CGGCA ATTGGACTGA TTTTGTACCGCTCGT cysI 878080 - 876374 - | sulfite reductase subunit beta cysJ 880063 - 878204 - | NADPH-sulfite reductase flavoprotein subunit cysD 880240 - 881154 + | sulfate adenylyltransferase subunit 2 TERM 529 882218 - 882175 - g 72 -11.8 -2.78384 | gap 1, overlap 882184 CCCTGGCCGATGAGA TTGA-CATCAGTCGCGGCGAT GTC ATTGCCGCGACTGATGATCCC CCCGAGGTTGCCGAT TERM 530 882208 - 882184 - g 81 -14.3 -2.65993 | overlap 882175 ATGAGATTGACATCA GTCGCGGCGAT GTC ATTGCCGCGAC TGATGATCCCCCCGA TERM 531 882433 - 882443 + G 71 -8.2 -3.91144 | overlap 882415 AACTGTCGCTAGATG CGCC TGT GGCG TTTGTACCGTATGCG nodQ 881214 - 883136 + | bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein TERM 532 883238 - 883224 - T 95 -11.4 -4.68724 | opp_overlap 883224 883235 CGATCCAACAGAAAA CCGCAC ATT GTGCGG TTTCGGGATCTGAGA TERM 533 883224 - 883238 + T 82 -11.4 -3.59262 | opp_overlap 883224, overlap 883235 CGATCCAACAGAAAA CCGCAC ATT GTGCGG TTTCGGGATCTGAGA rpoZ 883569 - 883270 - | DNA-directed RNA polymerase subunit omega TERM 534 883708 - 883721 + r 73 -2.3 -5.15167 | overlap 883709 GTGCTGATGGAACTT CCTGC TTTC GCAGA TTTTTCTTGCTGATG gmk 884415 - 883801 - | guanylate kinase PD0721 885360 - 884497 - | hypothetical protein TERM 535 885837 - 885864 + G 76 -10.6 -3.72087 | gap 1, overlap 885842 TACAGGCAGATGGCG GCACCCGT-ACCG CAG CGATCACGGGTGC TTATGTTGCCTTGGT TERM 536 885842 - 885891 + G 82 -11.3 -3.90744 | overlap 885837 GCAGATGGCGGCACC CGTACCGCAGCGATCACGGGTGC TTAT GTTGCCTTGGTCGATGCGGTGCG TTGTTTAGAGCAGCG rph 885458 - 886183 + | ribonuclease PH TERM 537 886608 - 886628 + G 100 -8.9 -4.86001 | overlap 886609 GCTGCGTGACGTTCC TGCGGGCAG GCG CTGCGCGCG TTTTTATGCCGTGAT TERM 538 886609 - 886627 + G 74 -10.2 -3.50877 | overlap 886608 CTGCGTGACGTTCCT GCGGGCAG GCG CTGCGCGC GTTTTTATGCCGTGA PD0723 886279 - 886878 + | putative deoxyribonucleotide triphosphate pyrophosphatase TERM 539 887466 - 887480 + G 81 -8.6 -4.32034 | CATCAATCGGCTGAG CTTTGG TAT CCAAAG TTTTAATGATGCTGC hemN 887101 - 888252 + | coproporphyrinogen III oxidase TERM 540 889102 - 889069 - g 100 -18.9 -3.05463 | ATGTGTTCGACCGAA TGGTGCAACGCGACG CTGG CGCCGCGTTGCACCC CAGTGACTGCACAAG TERM 541 890073 - 890047 - g 100 -21 -3.7282 | GCACGCGATCAAGAA CGCTTGGCGCTT GCC AAGCGCCAAGCG ACTGAAACCATCGAA PD0725 888322 - 890808 + | hypothetical protein PD0726 890805 - 891143 + | hypothetical protein pip 892176 - 891235 - | proline imino-peptidase hemK 893351 - 892524 - | protoporphyrinogen oxidase TERM 542 892777 - 892762 - G 70 -6.8 -4.07885 | GATGGTGGTTCAAAA CGCAGA TCAC CCTGCG TCAAATGTGGATCAG TERM 543 893768 - 893798 + H 72 -5.5 -4.53765 | gap 1, overlap 893768 893770 893771 CTCATCGGCTCAACT G-GGGCCAACAATC GTCT GATTGTTGGCGTAC TTTTCTGCTATCTGT TERM 544 893770 - 893795 + H 74 -10.5 -3.21099 | overlap 893768 893768 893771 CATCGGCTCAACTGG GGCCAACAATC GTCT GATTGTTGGCG TACTTTTCTGCTATC TERM 545 893771 - 893794 + H 83 -14 -2.51936 | overlap 893770 893768 893768 ATCGGCTCAACTGGG GCCAACAATC GTCT GATTGTTGGC GTACTTTTCTGCTAT TERM 546 894038 - 894026 - H 82 -2.7 -5.46629 | AATATTGCAAAAAAA TACCT TCC AGATA TAGATTTTATTAGAA PD0729 894505 - 894828 + | hypothetical protein PD0730 894825 - 895736 + | hypothetical protein TERM 547 896324 - 896344 + F 86 -4.1 -5.58074 | TATTTATCGTGATGT TGATTAAAG AAT TTTTAGTCA TTTTTTTAGTCATTC TERM 548 898496 - 898508 + G 74 -10.5 -3.46982 | overlap 898494 ACGGCCGCGGTGCTC CGGCG ACA CGCCG TATTGTTAATGTCAG xadA 896422 - 899415 + | outer membrane protein XadA TERM 549 899424 - 899449 + F 100 -17.6 -5.65678 | CTGGTAATGTGTATG CGCGGGCAGC CGTTGT GCTGCCCGCG TTTTTTCTGTTTTGT TERM 550 900652 - 900663 + G 71 -5.8 -4.30576 | CCCGTGTGTTGGAGA TGCC TCAT GGCA TTTTACTGGTCACGG xpsE 899658 - 901409 + | general secretory pathway protein E TERM 551 901984 - 902002 + G 77 -4.4 -4.9445 | GATCCTGATTTTTGT GGTTGGCG GTG CGCTTGCC TTTTTGCTTGGTTAT TERM 552 902103 - 902119 + G 74 -2.9 -4.87626 | overlap 902104 TGGCATTGGGTCACT TCATCGG TGA CTGGTGG TTTTTACTATTAGCG xpsF 901445 - 902662 + | general secretory pathway protein F TERM 553 902827 - 902837 + G 74 -3.2 -4.89063 | TAAAATGAATATGGG TGCG TTC TGCA TTTGTTTTTCCCTAC xpsG 902826 - 903314 + | general secretory pathway protein G precursor xpsH 903320 - 903826 + | general secretory pathway protein H precursor xpsI 903823 - 904221 + | general secretory pathway protein I precursor TERM 554 904275 - 904294 + G 75 -7.1 -4.42788 | overlap 904269 GCAACCGTGCTACTG GCCAGTG GTCTTA CGCTGGC TTTTGTGACGTTGCA TERM 555 904440 - 904451 + G 74 -7.2 -4.15703 | GGGGAGGATAGGGAG CGGC ACAT GCCG TTGTTGTTTGTCGGG TERM 556 904785 - 904812 + G 70 -9.8 -3.32963 | opp_overlap 904749 ATCAAGGATGACATT GCACCGTGGCCG ACAC TGGTCGTGGTGC TTCTGCAGTCCAACT xpsJ 904218 - 904844 + | general secretion pathway protein J pefK 904844 - 905689 + | general secretory pathway protein K pefL 905662 - 906816 + | general secretory pathway protein L xpsM 906797 - 907429 + | general secretion pathway protein xpsN 907419 - 908186 + | XpsN protein xpsD 908231 - 910558 + | general secretory pathway protein D precursor TERM 557 910654 - 910624 - f 79 -11.2 -3.45634 | opp_overlap 910632 ATGCTAATTAATTAA GCCATTTACTCATG TGG CATGAGTGTATGGC TTGGCGGCAATATAA PD0743 911164 - 911370 + | hypothetical protein hsf 911358 - 918872 + | surface protein ahpC 919236 - 919796 + | subunit C of alkyl hydroperoxide reductase TERM 558 919806 - 919835 + F 74 -11.5 -2.84602 | opp_overlap 919808, overlap 919805 919808 ATCTGAATTGCGAGA CATCCTCGGCC AACAACGC GGTCGAGGATG ATTTCATGAACTAAA TERM 559 919860 - 919884 + F 82 -7.8 -4.60797 | ACTAAAAAGCTGGTA CTCCGACGCG TCTGT TGCGTCGCAG TTTTGTATGTGGGGA ahpF 919994 - 921589 + | subunit F of alkyl hydroperoxide reductase oxyR 921694 - 922629 + | oxidative stress transcriptional regulator PD0748 922754 - 923443 + | hypothetical protein rpmE2 923980 - 924222 + | 50S ribosomal protein L31 type B TERM 560 924396 - 924421 + F 79 -10.3 -3.50953 | opp_overlap 924396 924395, overlap 924394 TTGATACCTAACAAC CGCCCTTACGG TTTG CCGTTTGGGCG TCTTTCCATTGTTAA TERM 561 924421 - 924396 - f 72 -10.3 -2.82142 | opp_overlap 924394 924396, overlap 924395 TTGATACCTAACAAC CGCCCTTACGG TTTG CCGTTTGGGCG TCTTTCCATTGTTAA gltA 924449 - 925738 + | type II citrate synthase rpsI 926347 - 925955 - | 30S ribosomal protein S9 rplM 926780 - 926352 - | 50S ribosomal protein L13 TERM 562 926670 - 926690 + g 72 -11.1 -3.01712 | overlap 926672 AGGTTTCGTTTTGCC GAGTAGGCG GCG CGCCAACTC TGTTGCAAGGCGACC coq7 927001 - 927654 + | ubiquinone biosynthesis protein speD 928617 - 927823 - | S-adenosylmethionine decarboxylase clp 928760 - 929449 + | cAMP-regulatory protein TERM 563 929732 - 929704 - T 73 -10.3 -3.09273 | opp_overlap 929694 929711, overlap 929706 GTCTTGCAATACATA CATGTGATGCTCG ATT CGAGCATCATCTG GCCGTGCGGGTAATT TERM 564 930606 - 930622 + T 82 -5.9 -5.15969 | CGGCATGCACGGCGC GATGATG GGG CATTATC TTTTTTGAATTCGGA TERM 565 930652 - 930677 + T 71 -9.7 -3.27771 | overlap 930650 ATTGATCTCCTTCAA GGGGTCTAGGA CCCG TTCTGGGCCCC TCTTGGTATTGTGCG moeB 932127 - 931297 - | molybdopterin biosynthesis protein TERM 566 931635 - 931662 + g 83 -10.6 -4.06419 | gap 1 TCGGTTCAGTACGTC CCCCTGCAGCACC AAC GGTGAT-CAGGGG TTGTTTATGGCGCCG TERM 567 932829 - 932839 + H 91 -8.2 -4.97158 | TGGAGGATCGTGGGG CGGC TAG GCCG TTTTATTTAATATGG pcp 932865 - 933326 + | peptidoglycan-associated outer membrane lipoprotein precursor TERM 568 933390 - 933413 + T 100 -15.4 -4.62984 | opp_overlap 933394, overlap 933394 TAAAGCAGTTTTAAG GAAAGCCCTC TGCA GAGGGCTTTC TTTTGTGTGTAATGA TERM 569 933394 - 933409 + T 100 -10.4 -4.85653 | opp_overlap 933394, overlap 933390 GCAGTTTTAAGGAAA GCCCTC TGCA GAGGGC TTTCTTTTGTGTGTA TERM 570 933409 - 933394 - T 84 -10.4 -3.91084 | opp_overlap 933390 933394 GCAGTTTTAAGGAAA GCCCTC TGCA GAGGGC TTTCTTTTGTGTGTA TERM 571 934348 - 934318 - T 100 -11.3 -5.1286 | TAAAAAGCACAAAAA GGCATCGTTCT GGAGTCCTT AGAACGATGCC TAATGCGGAGCTACT lpd 935809 - 934373 - | dihydrolipoamide dehydrogenase sucB 937421 - 936246 - | dihydrolipoamide acetyltransferase TERM 572 936766 - 936756 - G 70 -3.2 -4.72272 | GGCTTTCACGAAAAA GCTC ATG AAGC CCAATTTGATACCGT kgd 940279 - 937463 - | alpha-ketoglutarate decarboxylase TERM 573 940234 - 940220 - G 75 -12.8 -2.53759 | AAGATCTTCAATGTA GGCGGC ATT GCCGCC GGCCAGAGGAGAGGA PD0761 942750 - 941482 - | hypothetical protein purB 944288 - 942921 - | adenylosuccinate lyase TERM 574 943050 - 943070 + g 82 -11.1 -3.79043 | CGAATCGGCGGTGAT GCCCTGACC ACG GGTCAGCGC TTTCAGTTGCTCGTA TERM 575 944613 - 944625 + H 72 -2.6 -4.93898 | AGGTGCGTATGTTGG CTGC TGTTC GCGG TTTTTCTGATCGTGT fumC 944813 - 946222 + | fumarate hydratase int 947386 - 946367 - | phage-related integrase PD0765 947676 - 947386 - | hypothetical protein TERM 576 947595 - 947585 - G 74 -6.8 -4.27886 | CTGGAAAGACATAAA CCAG CGG CTGG GGGCATGTCTCGTAT PD0766 947803 - 948039 + | hypothetical protein TERM 577 948584 - 948570 - g 85 -9.2 -4.46656 | opp_overlap 948572 TGGACAACATGAAAA CCGCGC TCA ACGCGG CGCTTGATCAGCTGG PD0767 948029 - 950854 + | hypothetical protein PD0768 950847 - 951359 + | hypothetical protein PD0769 951363 - 951782 + | hypothetical protein PD0770 951858 - 952553 + | hypothetical protein TERM 578 952938 - 952912 - f 95 -13 -4.20696 | overlap 952913 TGATGAAGGGCAAAA CGCATCCCTTGC AAA GCAAGGGGTGCA GTTAGCAAAGAACCT TERM 579 952937 - 952913 - f 90 -14.3 -3.11936 | overlap 952912 GATGAAGGGCAAAAC GCATCCCTTGC AAA GCAAGGGGTGC AGTTAGCAAAGAACC TERM 580 952984 - 952961 - f 77 -3.9 -5.11937 | AAGAACCTGAAAAAA CTTCAATAC CACGAT GTATTGGAG GCCTGGGTCGGAATC PD0772 953388 - 953639 + | hypothetical protein gidA 955952 - 954063 - | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA TERM 581 956190 - 956216 + r 100 -14.4 -4.02719 | opp_overlap 956189 956188 GGTGGGGAAGCAAGG GGCTGGCAGGTC AGA GGGCTGCCAGCC TTTGATGTTTCATGG TERM 582 956232 - 956250 + r 71 -9.6 -3.20896 | overlap 956230 TTTGATGTTTCATGG TGTCCACA CAA TGTGGGCA TATCTTCATTAATTC PD0774 956827 - 956492 - | hypothetical protein TERM 583 957336 - 957355 + G 91 -3.5 -5.50499 | overlap 957327 957338 GTTGCTTGGTTGTGT CATGCAG CCATTT CTGCACG TTTTTTTGGATGTGG PD0775 957180 - 957422 + | hypothetical protein PD0776 957419 - 958027 + | hypothetical protein aspH 959239 - 958334 - | aspartyl/asparaginyl beta-hydroxylase bioC 960201 - 959314 - | biotin synthesis protein PD0779 960582 - 960788 + | hypothetical protein PD0780 961485 - 961228 - | hypothetical protein PD0781 961969 - 962868 + | putative GTP cyclohydrolase cynT 962865 - 963500 + | carbonic anhydrase TERM 584 963528 - 963549 + T 79 -11.5 -3.41961 | opp_overlap 963521 963528 TCCAGAAAGCACGAA GCCCCTGTC TTAT GACCGGGGC TTGCTTCCTAGTGCT TERM 585 963549 - 963528 - T 79 -11.5 -3.35467 | opp_overlap 963528, overlap 963521 TCCAGAAAGCACGAA GCCCCTGTC TTAT GACCGGGGC TTGCTTCCTAGTGCT TERM 586 963593 - 963575 - T 72 -10.4 -2.90496 | overlap 963572 963581 GTGCTGTTCAAACGA TCAGAATC AGC GATTCTGA AGATGTCCACTGCTT acrF 966748 - 963581 - | multidrug-efflux transporter TERM 587 964977 - 965007 + g 74 -3.2 -4.83615 | TTCTCCAATACAGCG CGCATCTGAGTGAA TAC TTCGTTCGTACGCG TTTTTGTGGCGCCTG TERM 588 965422 - 965436 + g 83 -10 -4.15143 | CGATGCTGATGGCTA TCACCG CTC CGGTGA TTTGTGTCATTGCTT acrA 967989 - 966763 - | precursor of drug resistance protein TERM 589 968965 - 968979 + G 93 -9.2 -4.7254 | GCAATCGGATGTACA GCGGCT CGG GGCCGC TTTTTACTGCCGCAT gdhA 968801 - 973792 + | NAD-glutamate dehydrogenase TERM 590 974412 - 974464 + G 72 -11.9 -2.73038 | overlap 974411 CGTTGACACCGATTG CTCCGTATCGGCCGCGACGTTGGCG CGG TGCGATCCTTAAGGCCGATACGGAG ATTCGTTTGCGTGTA ppnK 973877 - 974644 + | inorganic polyphosphate/ATP-NAD kinase ushA 974730 - 975686 + | 5'-nucleotidase TERM 591 976270 - 976284 + G 91 -3.5 -5.47218 | GAGGAACATGCGATT GTTGC GCCGG GCGAC TTTTTTTACATACCG TERM 592 976299 - 976319 + G 80 -11.9 -3.34233 | opp_overlap 976297 CTTTTTTTACATACC GGCTGGTGT ACC ACATCAGCC TTATAACAATTCTAA PD0788 975976 - 976425 + | hypothetical protein traC 978446 - 977346 - | DNA primase PD0789 976845 - 977645 + | resolvase/integrase-like protein PD0791 979512 - 978514 - | hypothetical protein PD0792 980330 - 979644 - | hypothetical protein sbcB 981763 - 980327 - | exonuclease I PD0794 981981 - 983228 + | hypothetical protein TERM 593 983241 - 983257 + F 80 -6.6 -4.77036 | TAAGCTCGTTATTGC GCTTGA ATGCA TCAAGC TTTTTACTCATAGAG TERM 594 984350 - 984360 + G 78 -2.4 -5.20606 | GTGGTTATGAGTTAC AGCC TGA GGCG TTTTTCTTACTGTTT yjcE 984196 - 985833 + | Na+:H+ antiporter PD0796 986184 - 986756 + | hypothetical protein rpiA 987764 - 987117 - | ribose-5-phosphate isomerase A TERM 595 987737 - 987749 + g 93 -10.5 -4.43879 | ATTCGATGGCCTTTT CGGCG GCG CGCCG TTTTGCTTCGCTCAT PD0798 988294 - 987827 - | hypothetical protein PD0799 988902 - 988291 - | hypothetical protein TERM 596 989167 - 989140 - R 72 -9.2 -3.5393 | gap 1 ACGATGCTCGCGAAA CGAC-CTTGAACC AGT GGTTCAAGTGGCG GCGTTGAAATACCAT PD0800 989675 - 989376 - | hypothetical protein TERM 597 989441 - 989459 + g 74 -3.1 -4.84274 | opp_overlap 989441 GTGCTGTCAGCAATA CACGC TCTCTATCC GCGTG TTTTTCATGTAGTTG PD0801 989893 - 989672 - | hypothetical protein TERM 598 989723 - 989738 + g 79 -3.2 -5.14965 | overlap 989719 989720 CATTGCTTCAACGCG CGAGCG TGCT TGTTCG TTTTTTGCTAGAAGT PD0802 990082 - 990639 + | hypothetical protein TERM 599 991159 - 991174 + G 70 -6.8 -4.20749 | overlap 991160 TAGACCTGGGGCATC TGCTGC ATGA GCAGCG TTTGTTCAAATCTTA pepP 990636 - 991976 + | aminopeptidase P PD0804 992687 - 992100 - | hypothetical protein PD0805 993511 - 992936 - | hypothetical protein TERM 600 994982 - 994994 + G 70 -9.1 -3.62032 | CGTTTGTGTGTGACC GCTCC AGA GGAGC TTTCCACATTGATGT PD0806 993722 - 995059 + | hypothetical protein TERM 601 995126 - 995160 + T 70 -2.2 -4.9934 | gap 1, overlap 995135 TTGACGCCTGCTACG CTGGG-GGAGCCTTT CTGCAT AAAGGTTACGTCCAG TTTTTGTAGTATTGT PD0807 995739 - 995251 - | hypothetical protein PD0808 997220 - 996795 - | hypothetical protein PD0809 997348 - 997899 + | hypothetical protein TERM 602 998447 - 998474 + G 71 -10.6 -3.19463 | gap 1, overlap 998449 CCACAGAAGCGTACT TAGGCGTGCGTGC TGC GCA-GCACGCCTC TTACTACCTGATCGC TERM 603 998449 - 998472 + G 84 -13.2 -3.15996 | gap 1, overlap 998447 ACAGAAGCGTACTTA GGCGTGCGTGC TGC GCA-GCACGCC TCTTACTACCTGATC TERM 604 998587 - 998553 - g 71 -11.2 -2.87132 | opp_overlap 998549 CTGGTTGTCGACAGA CTGTGCCCGTGCTGCC CTA GGGGGCACGGGCGCGG TGAAGTGTGGTGGCA ilvE 997993 - 999081 + | branched-chain amino acid aminotransferase fis 999532 - 999260 - | DNA-binding protein Fis PD0812 1000295 - 999618 - | hypothetical protein TERM 605 1000067 - 1000101 + g 74 -4.9 -4.69326 | CGGTGATCAGTAGAG CGTTCAGGCGACG GTTACGCTG CGTCGCCAAGACG TTTTCTATTGGATGT PD0813 1000727 - 1000347 - | PbsX family transcriptional regulator TERM 606 1001294 - 1001306 + G 86 -4.1 -5.34309 | GGCGCGTATTGGTGC TGAGC TTG GCTTA TTTTTATTTGGTGCT TERM 607 1001426 - 1001440 + G 77 -3.5 -5.05606 | gap 1, opp_overlap 1001423, overlap 1001426 1001427 CACGTCGGAAATTGC G-GCGC CGCT GCGCAC TTTATTTTTATTAGC PD0814 1001235 - 1002479 + | hypothetical protein PD0815 1002563 - 1003393 + | beta 1,4 glucosyltransferase TERM 608 1003599 - 1003610 + G 95 -5.8 -5.42862 | opp_overlap 1003599 GATCACCAGTAGTAA TGCG GTGC CGCA TTTTTTTCCAGGTGT TERM 609 1004152 - 1004142 - g 78 -6.8 -4.62471 | TGTAACGTTTAAAAA CAGG AAT CCTG GGCCACAACTGATCG PD0816 1003390 - 1004424 + | hypothetical protein ribA 1006047 - 1004851 - | GTP cyclohydrolase TERM 610 1006300 - 1006310 + H 74 -6.8 -4.34488 | opp_overlap 1006299, overlap 1006297 TACGCATTGATACAC TCGC TGA GCGA TTTGTTGTCCCTCTG TERM 611 1006618 - 1006632 + H 71 -3.5 -4.7497 | gap 1, overlap 1006618 1006619 TATGAACTAGCCCAT C-CCGC TTCA GCGGAG TTTTTCATGGATGCG yneN 1006958 - 1007602 + | thioredoxin PD0819 1007904 - 1009133 + | hypothetical protein TERM 612 1010029 - 1010042 + G 90 -4.5 -5.37043 | GAACGTCGGATGAGC CGTCT GGTC GGACG TTTTTTCTATGAACT TERM 613 1010979 - 1010993 + G 81 -3.5 -5.1675 | CATGATTGTTGCCAA TGTGC AGGCC GCGCA TTTTTTGCTCAATGC vacB 1009312 - 1011828 + | truncated ribonuclease R TERM 614 1012432 - 1012422 - g 74 -6.8 -4.29738 | overlap 1012423 TGATATTGAGGAAAA TGCG CGG CGCA AGGGAATTGAGGTGC yjfH 1012288 - 1013037 + | tRNA/rRNA methyltransferase yrdA 1014134 - 1013571 - | transferase TERM 615 1014713 - 1014681 - R 74 -5.7 -4.59414 | GGATAACAAGTAAAA GATTCCTAAAAAAAT CCG ATGATTTTAGGAACC TGATCGGCAGAAACC folE 1015409 - 1014789 - | GTP cyclohydrolase I TERM 616 1016476 - 1016456 - H 75 -3.1 -5.26875 | GCTTCAAGTAAAAAA GGTACGCAG CCA CGACGTTCC AACAATGCGATGACA TERM 617 1017522 - 1017506 - g 70 -6.5 -4.08767 | opp_overlap 1017489 GCCACTGCTTTAAAA GTGGACA GTT TGACCAC TGGCAACACGGCGAT hsf 1016486 - 1020268 + | surface protein TERM 618 1020296 - 1020325 + F 100 -16.5 -5.53991 | opp_overlap 1020270 1020294 1020293 AGCAATGAAAACGTT TAGGACGGGGGGG TAGT TTCCCCCGTCCTA TTTTTTTGGTGCATG TERM 619 1021557 - 1021573 + G 78 -2.1 -5.28778 | opp_overlap 1021558 1021560, overlap 1021558 TTGTCTCCTGCTAAC AGACGCG GGG CGAGTCG TTTTTTGTCGATGAT ampE 1020954 - 1021898 + | transmembrane protein PD0826 1024288 - 1022066 - | hypothetical protein TERM 620 1022781 - 1022768 - G 74 -8.1 -3.96506 | overlap 1022763 GAGGCTAAAACAGAA CAGCG CCAT CGCTG TAACCGCAGTCGTGC TERM 621 1023849 - 1023833 - G 70 -8.7 -3.75292 | overlap 1023843 ACCGATCATCAATAA CGTGACA CCA TGCCACG GCTGATCCCCGCCAC TERM 622 1024063 - 1024048 - G 74 -3.2 -4.98103 | overlap 1024052 CAACAAAACACAAAA GCGATA GCAA CACCGC CTTGCTACGGCCTAA purD 1026129 - 1024837 - | phosphoribosylamine--glycine ligase TERM 623 1025992 - 1025964 - G 100 -18.9 -3.09492 | opp_overlap 1025957 1025965 GTGCCAACGCCAACA GCCCGTCCAGGTC GGT GACCTGGACGGGT GCATTACGGCATTTA TERM 624 1025965 - 1025991 + g 100 -22.4 -2.53392 | opp_overlap 1025964, overlap 1025957 TGCCAACGCCAACAG CCCGTCCAGGTC GGT GACCTGGACGGG TGCATTACGGCATTT purH 1027905 - 1026322 - | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase TERM 625 1028504 - 1028514 + r 80 -6.8 -4.60746 | TGAACAGTCTGTGTC CGCA ATT TGCG TTTTCCTGTTTTTAC PD0829 1029032 - 1028526 - | hypothetical protein yibK 1029688 - 1029227 - | tRNA/rRNA methylase PD0831 1029905 - 1030216 + | hypothetical protein fabH 1030374 - 1031390 + | 3-oxoacyl-(acyl carrier protein) synthase III TERM 626 1031749 - 1031716 - f 76 -8.2 -4.10161 | gap 1 GAGCATCCTTCAAAA TGCAGCGGTGCACCG GAGAA CAGTGCATC-CTGCA TAAACCAGCTTTGGT TERM 627 1032454 - 1032473 + G 72 -2 -4.91459 | overlap 1032457 1032458 GCTGGCCAAGGAACT TCTTGCCG ATGA TGGCGTGA TTTTTGTCAGTATTG mod 1032056 - 1033684 + | methyltransferase, type III restriction-modification system PD0834 1033681 - 1033899 + | hypothetical protein PD0835 1033883 - 1036405 + | hypothetical protein dhaA 1036402 - 1037307 + | haloalkane dehalogenase ykgJ 1038061 - 1037678 - | ferredoxin TERM 628 1038319 - 1038330 + G 72 -2.2 -4.90266 | overlap 1038313 GCATGAGAGTGATAG CTGT GCTG GCAG TTTTTAGTTGCTGGA PD0838 1038252 - 1038485 + | hypothetical protein TERM 629 1039296 - 1039314 + G 80 -8.8 -4.21933 | AGTTACCCAACTATG CGGTGTTC GAC GAGCGCCG TTATTTTGAAGTTGA TERM 630 1039780 - 1039791 + G 72 -2.2 -4.89393 | GGTGCAGGATTATTG CCGT AAGA ATGG TTTTTCTAAGGTTTG nadE 1038938 - 1040575 + | NAD synthetase TERM 631 1041012 - 1041038 + G 76 -5.1 -4.68424 | gap 1, opp_overlap 1041012, overlap 1041012 CTAGATCTGGAAGTA GG-GGCCGGG ACATTTCA TCCGGCCACC TTTTTGCGTGCGTTG glyQ 1040886 - 1041809 + | glycyl-tRNA synthetase subunit alpha glyS 1041901 - 1044069 + | glycyl-tRNA synthetase subunit beta PD0842 1045181 - 1044372 - | hypothetical protein tonB 1046395 - 1045496 - | TonB protein gshB 1047317 - 1046373 - | glutathione synthetase pilG 1047573 - 1047989 + | pilus protein TERM 632 1048365 - 1048379 + G 72 -2.1 -4.88407 | overlap 1048356 GGTTATCGATGACCT CTATG GACAG CGTAG TTTTTCATTGAGTAA pilI 1048006 - 1048536 + | pilus biogenesis protein pilJ 1048537 - 1050618 + | pilus biogenesis protein TERM 633 1052164 - 1052146 - g 74 -8.1 -3.92373 | TAGTTGAGCCAGAAA GCGCCGA CATCT TCGACGC ATCGCTGGGGGAGCC TERM 634 1052790 - 1052800 + G 78 -2.4 -5.14563 | CCTCAGCTGATTGAG GGGG GCG CGCC TTTTTTCGTGGACAG TERM 635 1053062 - 1053095 + G 81 -12.5 -3.09933 | TGAAGGGGTGGGTGT GTTATCGGCAATGGC AACA GCGATTGCCGATACC TTGACTGCGTTGCGG TERM 636 1054334 - 1054354 + G 72 -3.9 -4.70879 | AGTTTCACGTGACTT CGATCCATT GGA ATTGGACCG TTTTTCCACTTTGCA cheA 1050615 - 1055903 + | chemotaxis-related protein kinase cheB 1055920 - 1057089 + | glutamate methyltransferase PD0850 1057111 - 1057581 + | hypothetical protein TERM 637 1057944 - 1057964 + T 72 -8.5 -3.82628 | opp_overlap 1057943 1057941 1057944, overlap 1057941 CTTTTAGAAACATAG TTATTCTTA ATA TAAGAATAA TATTTCTTTGCGGTG TERM 638 1057974 - 1058008 + T 100 -12.9 -5.44119 | gap 1 GAATAATATTTCTTT GCGGTGGATCCATGCC GGGG GGC-TGGGTTCGCCGC TTTTTTTGAGATAGG purF 1059528 - 1058071 - | amidophosphoribosyltransferase PD0852 1060296 - 1059643 - | colicin V production protein PD0853 1061360 - 1060374 - | hypothetical protein folC 1062724 - 1061399 - | folylpolyglutamate synthase/dihydrofolate synthase TERM 639 1062069 - 1062039 - G 85 -4.6 -5.24129 | overlap 1062040 1062041 TTTTCGTAGAAAAAA TCGCTACCAGCGCG GAT CGCATTGGCACCAA GTAAGTAGGCATGGC PD0855 1063423 - 1063860 + | VirK protein TERM 640 1063926 - 1063896 - T 100 -18.4 -3.95787 | overlap 1063897 1063899 GATCATATTTAGAAA TCAGGACGAGATGG ATA CCATCTCGTCCTGC CGAGCACTTAGCTCA TERM 641 1063925 - 1063897 - T 100 -21.9 -2.9699 | overlap 1063896 1063899 ATCATATTTAGAAAT CAGGACGAGATGG ATA CCATCTCGTCCTG CCGAGCACTTAGCTC TERM 642 1063923 - 1063899 - T 100 -18.7 -3.03459 | overlap 1063897 1063896 CATATTTAGAAATCA GGACGAGATGG ATA CCATCTCGTCC TGCCGAGCACTTAGC dcp 1066006 - 1063943 - | peptidyl-dipeptidase PD0857 1067190 - 1066798 - | histone-like protein PD0858 1067876 - 1068370 + | hypothetical protein TERM 643 1068872 - 1068886 + G 71 -10 -3.56161 | opp_overlap 1068871 CCAGGGCAATGATAT CGGTAC CCA GTACCG TTCTGTGATCCATTG msrA 1068474 - 1069124 + | methionine sulfoxide reductase A TERM 644 1070525 - 1070543 + G 77 -3.7 -5.00616 | overlap 1070524 1070515 TAGCAGTATGGTGGG CGGGGCG TTCAC CGCTGCG TTTTTTCCGCGAAAC gltP 1069720 - 1071018 + | proton glutamate symport protein TERM 645 1071075 - 1071103 + F 95 -11.8 -4.05033 | opp_overlap 1071074 1071073 1071071 CTGTGGGACAATAGT GGGGCATCGT ATGACTTTC ACGATGCCCC TTTCTCTACCGTCGA TERM 646 1071812 - 1071801 - g 74 -2.2 -5.03715 | overlap 1071803 ATGATGCGGAAAAAA TCGC AACC GCAA TCCAAGCCGCCGTTG tktA 1071125 - 1073185 + | transketolase gidB 1073782 - 1073144 - | glucose-inhibited division protein B hetI 1074602 - 1074009 - | HetI protein xthA 1075491 - 1074703 - | exodeoxyribonuclease III TERM 647 1076626 - 1076647 + r 83 -13.7 -2.72344 | GAGGAGTGTGGCCAC GGCCAGCGG CAAT TCGCTGGCC TGCTTGAGGCTGGCG PD0866 1078254 - 1077862 - | integral membrane protein nadC 1079478 - 1078612 - | nicotinate-nucleotide pyrophosphorylase nadB 1081018 - 1079480 - | L-aspartate oxidase nadA 1082002 - 1081031 - | quinolinate synthetase TERM 648 1081090 - 1081106 + g 78 -6.5 -4.63218 | CAATTTTTGCATCTA CCGTGAC TTC GTGACGG TTTTCTTCCAAGGCG sodA 1083145 - 1082453 - | superoxide dismutase [Mn] TERM 649 1082726 - 1082746 + g 74 -7.5 -4.1552 | opp_overlap 1082715, overlap 1082742 CCAAGCCCAGCCCGA GCCGAAACG ACC TGTTGCGGC TTTGTTGAAGCGCTC TERM 650 1083405 - 1083434 + H 77 -3.8 -5.26155 | opp_overlap 1083397 1083420, overlap 1083410 1083420 1083424 GAATAATTAGCTTTA TCTATTTTTTTA AAGCTA TTAAAAAATAGA TTTTTATATTTATAT TERM 651 1083650 - 1083619 - g 71 -9.6 -3.56568 | gap 1, overlap 1083607 1083621 TAATGAGCTTCTAAA CACTAGCAAC-TCAC AAC GTGAAGTTGCCAGTA AACTAGGAGTAAGCA TERM 652 1083648 - 1083621 - g 70 -10 -3.35775 | gap 1, overlap 1083607 1083619 ATGAGCTTCTAAACA CTAGCAAC-TCAC AAC GTGAAGTTGCCAG TAAACTAGGAGTAAG PD0871 1083467 - 1083745 + | Trp operon transcriptional repressor TERM 653 1083749 - 1083735 - T 100 -3.6 -5.93809 | TTCTTAGAAAAAAAA TAAGCT ACT AACTTA TCGGTTTGAGGTGAT isf 1084589 - 1083936 - | iron-sulfur flavoprotein TERM 654 1084322 - 1084311 - G 71 -4.4 -4.57837 | AGATCGCTCCAAAAA TGCT TTAA AGCA ACTGTTAGTACCGTA PD0873 1085227 - 1084841 - | hypothetical protein PD0874 1085869 - 1085351 - | hypothetical protein trpD 1087923 - 1087303 - | anthranilate synthase component II TERM 655 1088232 - 1088214 - H 75 -9.6 -3.53012 | opp_overlap 1088212 1088214 GGTTCCCGCTGGAAA CGATGCGA TCA TCACATCG TATTTGTCGAGTCCT TERM 656 1089664 - 1089675 + H 79 -2.2 -5.47159 | GTACAATGCTGCGAC TCTG TGTT CAGG TTTTTATTTGTTAGA mttC 1089690 - 1090496 + | type V secretory pathway protein PD0879 1091315 - 1090710 - | hypothetical protein PD0880 1092093 - 1091620 - | hypothetical protein TERM 657 1092299 - 1092328 + H 73 -2.1 -5.18726 | ACCTTTTCTGATTAC GACTAAACGAATC TTAC GAATCTTATAGTC TTTTTGTTATCAAAA TERM 658 1092457 - 1092479 + H 76 -2.1 -5.42198 | opp_overlap 1092457 AAATCACAAAACTAA TTTTCAATT TACGT ACTTGAAAA TTTTATTTTTTAACC TERM 659 1093446 - 1093419 - g 74 -3.4 -4.85599 | gap 1, opp_overlap 1093422 1093428, overlap 1093420 1093422 GTGATCGCACAAAAA GGACCGAATGCAG ATG CTGC-TTCGGTAG TCTATGATGCGCTGC TERM 660 1093443 - 1093422 - g 70 -9.5 -3.32317 | gap 1, opp_overlap 1093422 1093428, overlap 1093420 1093419 ATCGCACAAAAAGGA CCGAATGCAG ATG CTGC-TTCGG TAGTCTATGATGCGC ftsY 1092666 - 1093859 + | cell division protein mutY 1093959 - 1095008 + | A/G-specific adenine glycosylase PD0883 1095043 - 1095315 + | hypothetical protein TERM 661 1095379 - 1095389 + G 85 -2.6 -5.55695 | CGTATGTGATAATCT TAAT TCT ATTA TTTTTTATATTATTA TERM 662 1095397 - 1095407 + G 72 -2.6 -4.86954 | TTCTATTATTTTTTA TATT ATT AATA TTCTTTTTTGTTGTT PD0884 1095354 - 1095902 + | hypothetical protein PD0885 1096031 - 1096765 + | hypothetical protein TERM 663 1097124 - 1097112 - g 83 -7.7 -4.59773 | GTTTATGTCTAAAAA TGCTG ATT CAGCA CTTAAGCTTGGTCAG ruvC 1096885 - 1097406 + | Holliday junction resolvase ruvA 1097492 - 1098076 + | Holliday junction DNA helicase motor protein TERM 664 1098152 - 1098172 + G 83 -14.1 -2.79302 | ACCTCTTCTCATTCA GGTGATTGC GCA GCAATCACC TCTAATAGCAATAGT kup 1098131 - 1100035 + | potassium uptake protein ruvB 1100096 - 1101127 + | Holliday junction DNA helicase B PD0890 1101145 - 1101570 + | hypothetical protein TERM 665 1102219 - 1102231 + G 70 -3.3 -4.68209 | overlap 1102216 CCGAAGCGCTGTTTG CCACC GCA GTTGG TTTGTTTGTTGCGAT tolQ 1101594 - 1102367 + | TolQ protein tolR 1102401 - 1102835 + | TolR protein tolA 1102825 - 1103865 + | TolA protein TERM 666 1104229 - 1104245 + G 75 -6.5 -4.4634 | AAATTTCCACGCTGG CTGGCCA TGT TGGTCGG TTTATTGTTCCCCTT TERM 667 1104401 - 1104423 + G 72 -11.4 -3.10112 | CGGGTGTTGTTGCTG CTGACTTGAA CCG TTCAGGTCAG TTCCGTACGTTGCCT tolB 1104208 - 1105527 + | translocation protein TolB PD0895 1105569 - 1106132 + | outer membrane protein P6 precursor TERM 668 1106166 - 1106194 + G 72 -12.3 -2.56449 | overlap 1106165 1106163 TCTACATTTTGTGTC GTCGCGATGGCCC TCG GGACCGTCGCGCC CTCTTCTGCTCAGAT PD0896 1106136 - 1106951 + | hypothetical protein PD0897 1107009 - 1107662 + | radical activating enzyme gpmA 1108544 - 1107795 - | phosphoglyceromutase nfi 1108645 - 1109364 + | deoxyinosine 3'endonuclease yclF 1111058 - 1109526 - | di-tripeptide ABC transporter membrane protein TERM 669 1110573 - 1110563 - G 95 -5.4 -5.36441 | overlap 1110572 TGCCCATATAAAAAA TGGT AAA ACCA CGATCACGACGTGTA TERM 670 1111871 - 1111854 - g 72 -11.3 -3.06796 | opp_overlap 1111854 TCTGATCGGACGCAA CGGGCAA CCCA TTGCCCG TTATTCGCCAATCAA TERM 671 1111854 - 1111871 + G 79 -11.3 -3.62597 | opp_overlap 1111854 TCTGATCGGACGCAA CGGGCAA CCCA TTGCCCG TTATTCGCCAATCAA gpo 1111450 - 1111956 + | glutathione peroxidase-like protein fpr 1112729 - 1111950 - | ferredoxin-NADP reductase thiC 1114682 - 1112871 - | thiamine biosynthesis protein ThiC TERM 672 1115606 - 1115594 - g 71 -4.8 -4.60258 | TCAGCAAACAAGAAA TCGC CAAAT GCGA GGAAGAGCAGGGTTA TERM 673 1115765 - 1115778 + G 76 -3.1 -4.99645 | overlap 1115761 ACTGGATGTGGCCGC GTCAT ACCG GTGAC TTTTCTTTCTACCGT PD0904 1115113 - 1117263 + | hypothetical protein TERM 674 1117283 - 1117265 - f 75 -9.6 -3.57263 | opp_overlap 1117264 1117265 ATTTGTATCGTTAAA CTGCTGCA AAA TACAGCAG ATATTCTTTCAGCCG TERM 675 1117295 - 1117320 + F 90 -13.3 -3.63895 | GCAGATATTCTTTCA GCCGCCGTCAT TGCG GTGATGGCGGC TTTCCCATCATTAAG gpmA 1117350 - 1117994 + | phosphoglycerate mutase PD0906 1118386 - 1117952 - | hypothetical protein TERM 676 1118033 - 1118044 + g 70 -3 -4.8143 | overlap 1118041 TGCATTATGTGAATT TTCA TTGC TGAA TTTTTCACTTATTGA TERM 677 1118353 - 1118368 + g 75 -6.2 -4.54205 | TTGAGCATGATTCTT TTGCTT TGTC AAGCAA TTTATTTAGTGTACT TERM 678 1118454 - 1118489 + G 78 -12 -3.29144 | opp_overlap 1118456 CCTATAGGGTGATAT CACCTTCCCATTCA TCCTACCC TGGATGGGGAGGTG TTCTAGACAGGGTAG PD0907 1118447 - 1118878 + | hypothetical protein TERM 679 1119363 - 1119373 + G 76 -3.2 -5.08824 | GGTATTCTTAATCTT TGTG CTG CACG TTTTTTAACTAGAGA PD0908 1119282 - 1119494 + | hypothetical protein TERM 680 1119958 - 1119969 + G 77 -4.4 -4.84033 | ACCTGTTGCTTCATT GTGT CTTT ACAC TTTTGCTTTTTCTCT PD0909 1119719 - 1120069 + | hypothetical protein PD0910 1120075 - 1121265 + | hypothetical protein PD0911 1121310 - 1121621 + | hypothetical protein PD0912 1121857 - 1122078 + | hypothetical protein TERM 681 1122232 - 1122245 + F 73 -4.5 -4.8855 | overlap 1122230 TTTTTTGGGACTAGC CGCGA TGCG TCGTG TTATTTTTCTTTTTT TERM 682 1123487 - 1123512 + G 80 -8.9 -4.17089 | overlap 1123490 1123506 TCAAAGTTTGATGAC CAGGGGCGGGG GTAT TCCCGCTCGTG TTTTGAGCCTTTAAC PD0913 1122236 - 1123663 + | hypothetical protein TERM 683 1123685 - 1123704 + GF 74 -7.8 -4.13995 | TGCCTACTTTTTTGG CGGCTCTG CTAA CAGGGCTG TTTAATTTATGCAAG PD0914 1123669 - 1124040 + | hypothetical protein PD0915 1124012 - 1125199 + | hypothetical protein PD0916 1125739 - 1125428 - | hypothetical protein PD0917 1126146 - 1125799 - | hypothetical protein TERM 684 1126038 - 1126053 + g 91 -7.6 -5.03227 | ATAACCATCTCAGTT GCCATT CTTC AATGGC TTTTCTTTCTGGTGT PD0918 1126598 - 1126143 - | hypothetical protein TERM 685 1126671 - 1126706 + H 71 -9.8 -3.29144 | TCTTTAGGCCCTCAA CACTTCCCCGTTCA TCCTACCC TGGATGGGGAGGTG TTCTACACAGGGTAG PD0919 1126793 - 1127116 + | hypothetical protein PD0920 1127085 - 1127384 + | hypothetical protein PD0921 1127386 - 1127652 + | hypothetical protein TERM 686 1128300 - 1128311 + G 77 -4.4 -4.84033 | ACCTGTTGCTTCATT GTGT CTTT ACAC TTTTGCTTTTTCTCT PD0922 1128016 - 1128411 + | hypothetical protein PD0923 1128417 - 1129607 + | hypothetical protein PD0924 1129652 - 1129963 + | hypothetical protein PD0925 1130175 - 1130420 + | hypothetical protein TERM 687 1130574 - 1130587 + F 73 -4.5 -4.8855 | overlap 1130572 TTTTTTGGGACTAGC CGCGA TGCG TCGTG TTATTTTTCTTTTTT TERM 688 1131829 - 1131854 + G 80 -8.9 -4.17089 | overlap 1131832 1131848 TCAAAGTTTGATGAC CAGGGGCGGGG GTAT TCCCGCTCGTG TTTTGAGCCTTTAAC PD0926 1130578 - 1132005 + | hypothetical protein TERM 689 1132027 - 1132046 + GF 74 -7.8 -4.13995 | TGCCTACTTTTTTGG CGGCTCTG CTAA CAGGGCTG TTTAATTTATGCAAG PD0927 1132011 - 1132382 + | hypothetical protein PD0928 1132354 - 1133541 + | hypothetical protein PD0929 1134081 - 1133770 - | hypothetical protein PD0930 1134488 - 1134141 - | hypothetical protein TERM 690 1134380 - 1134395 + g 91 -7.6 -5.03227 | ATAACCATCTCAGTT GCCATT CTTC AATGGC TTTTCTTTCTGGTGT PD0931 1134803 - 1134579 - | hypothetical protein TERM 691 1134819 - 1134807 - H 71 -10.5 -2.58861 | overlap 1134806 CAGCAGCTCCACAAG GCGGC TGT GCCGC GTCCGATCCGCAGCG PD0932 1135024 - 1135272 + | hypothetical protein PD0933 1136627 - 1135434 - | hypothetical protein PD0934 1137065 - 1136736 - | hypothetical protein PD0935 1138382 - 1137078 - | hypothetical protein TERM 692 1138503 - 1138485 - R 73 -10.3 -3.0263 | opp_overlap 1138480 ACCAGCCGGTGAAGA GCGACAC AAAAA GTGTCGC TCCAATAATTTAACC PD0936 1138641 - 1138513 - | hypothetical protein PD0937 1138912 - 1138661 - | hypothetical protein PD0938 1139349 - 1139038 - | hypothetical protein PD0939 1140565 - 1139390 - | hypothetical protein PD0940 1140937 - 1140653 - | hypothetical protein TERM 693 1140697 - 1140686 - G 77 -4.4 -4.84033 | AGAGAAAAAGCAAAA GTGT AAAG ACAC AATGAAGCAACAGGT TERM 694 1140764 - 1140750 - G 74 -2.8 -4.83715 | overlap 1140752 AATGCAAAAAAATAA TCCTGA AAA CCAGAA GTTGGCTGAACAAGA PD0941 1141374 - 1141162 - | hypothetical protein TERM 695 1141293 - 1141283 - G 76 -3.2 -5.08824 | TCTCTAGTTAAAAAA CGTG CAG CACA AAGATTAAGAATACC PD0942 1141776 - 1141513 - | hypothetical protein TERM 696 1142288 - 1142269 - g 85 -2.2 -5.58209 | TGAAAGCTAAAAAAA TACTACTT GACA AAGCAATA TCAATGTGCATTCCG PD0943 1142253 - 1142627 + | hypothetical protein exsB 1143372 - 1142680 - | transcriptional regulator aspS 1143888 - 1145657 + | aspartyl-tRNA synthetase TERM 697 1145893 - 1145852 - T 79 -8.7 -4.37092 | overlap 1145853 1145890 ACCTGCCTCATAAAA CGCGTCATGTGGCCAGC CTCACCCT GTCGCCCACATGACGCA CCAACCCGATGCAAC TERM 698 1145892 - 1145853 - T 71 -10 -3.21934 | overlap 1145852 1145890 CCTGCCTCATAAAAC GCGTCATGTGGCCAGC CTCACCCT GTCGCCCACATGACGC ACCAACCCGATGCAA fumB 1147492 - 1145975 - | fumarate hydratase TERM 699 1146141 - 1146129 - G 70 -6.9 -4.09739 | opp_overlap 1146127 1146129 CCAAGGTCTTCAAAA GCCAG TAT CCGGC TCGTTTTGATCGCCT ctp 1149334 - 1147733 - | carboxyl-terminal protease TERM 700 1147950 - 1147929 - G 83 -5.7 -4.85599 | overlap 1147904 GTTAGTTTATAAAAA CGGGACGTG AGTA CCTGTCCCG AAGATTGGGCACCGT ctp 1151056 - 1149449 - | carboxyl-terminal protease TERM 701 1149666 - 1149645 - G 100 -10.1 -4.85599 | GTCAGTTTATAAAAA CGGGACATG AGTA CCTGTCCCG AGGATTGGGCGCCGT TERM 702 1151185 - 1151158 - R 88 -12.8 -3.61922 | overlap 1151161 AATATCTATCTGAAA TGACCTGAGTGG CTTG CCACTCAGGTTA AAAACAAAGCTGACG TERM 703 1151182 - 1151161 - R 87 -14.5 -2.92792 | overlap 1151158 ATCTATCTGAAATGA CCTGAGTGG CTTG CCACTCAGG TTAAAAACAAAGCTG TERM 704 1152313 - 1152277 - R 76 -9.3 -3.80014 | opp_overlap 1152281, overlap 1152279 1152280 ACACGCATTACTAAA CACCGCCGATGCACGGC ACT ACCGTGCATCGGCTTCC ATACTCAGACTAGAA TERM 705 1152311 - 1152279 - R 93 -14.1 -3.48292 | opp_overlap 1152281, overlap 1152277 1152280 ACGCATTACTAAACA CCGCCGATGCACGGC ACT ACCGTGCATCGGCTT CCATACTCAGACTAG TERM 706 1152310 - 1152280 - R 100 -17.6 -2.68493 | opp_overlap 1152281, overlap 1152279 1152277 CGCATTACTAAACAC CGCCGATGCACGGC ACT ACCGTGCATCGGCT TCCATACTCAGACTA TERM 707 1152281 - 1152309 + r 100 -20.4 -3.09635 | opp_overlap 1152280 1152279 1152277 GCATTACTAAACACC GCCGATGCACGG CACTA CCGTGCATCGGC TTCCATACTCAGACT PD0950 1155400 - 1152323 - | serine protease traD 1156457 - 1156095 - | conjugal transfer protein TERM 708 1156608 - 1156653 + r 93 -9.9 -4.67608 | gap 2, opp_overlap 1156607 1156619, overlap 1156609 CATACTTGTAGATAT TCTCCATAGCACGTTTCACCG TGCCCT CGGTGAAACG-GCT-TGGGGC TTTTGTCTTAGCATC TERM 709 1156609 - 1156652 + r 86 -13.4 -3.39842 | gap 2, opp_overlap 1156607 1156619, overlap 1156608 ATACTTGTAGATATT CTCCATAGCACGTTTCACCG TGCCCT CGGTGAAACG-GCT-TGGGG CTTTTGTCTTAGCAT TERM 710 1156644 - 1156619 - R 81 -13.4 -2.62735 | opp_overlap 1156609 1156608, overlap 1156607 ATATTCTCCATAGCA CGTTTCACCG TGCCCT CGGTGAAACG GCTTGGGGCTTTTGT TERM 711 1157150 - 1157160 + r 72 -8.2 -3.66178 | AACGCCTTTGGATTC CCCC CGT GGGG TTTGGGGTTAACCGA PD0954 1157516 - 1157184 - | hypothetical protein TERM 712 1157303 - 1157331 + g 83 -10.3 -3.96148 | opp_overlap 1157299, overlap 1157304 TACCCAGACGAGCCG CGAACTCGGGCTG CGA TAGCTCGAGTTCC TTTCTCATAAAACGG TERM 713 1157304 - 1157330 + g 81 -13.8 -2.97475 | opp_overlap 1157299, overlap 1157303 ACCCAGACGAGCCGC GAACTCGGGCTG CGA TAGCTCGAGTTC CTTTCTCATAAAACG TERM 714 1157800 - 1157784 - R 100 -13.7 -4.08692 | TAAGCTGCCGGAAAA GGCGCTG CTC CAGCGCC TCGCGGGTTGAGCGG PD0955 1159147 - 1158242 - | hypothetical protein PD0956 1160638 - 1159634 - | hypothetical protein TERM 715 1160817 - 1160795 - R 100 -16.4 -3.04144 | CCGGCAGGGTTAAGA TTCCTGCCTG ACA CAGGCAGGAA ATATCAGGGGGTGCC PD0957 1162306 - 1161143 - | phage-related tail fiber protein TERM 716 1161310 - 1161344 + g 70 -9.2 -3.67296 | GCACATGAAACCCTG CGGCCTGCATGCTGAT GTT ATGGGCATGCTTGCCG TTTGCATCGGTGGTG TERM 717 1161447 - 1161423 - G 78 -5.7 -4.82901 | overlap 1161424 TTTTGCTCATAAAAA CCCATGTCTCT TCC AGAGGCATAGA TCGCTCTGAAAGAAC TERM 718 1161727 - 1161695 - G 76 -11.9 -3.14881 | opp_overlap 1161702 GAAGGTGCCGACCAA GGCAGGGTCGGCGGT GTG AACGCCGACGGTGCC TTCAAGAAAATTGGG TERM 719 1162104 - 1162147 + g 70 -9.6 -3.3506 | gap 1, opp_overlap 1162108, overlap 1162105 TCCTGGTAGCCTTTA AGCACCGTGGTG-ATGGCGTG CAG CACGGCATTCATGACGGTGCG TTCTACGGGTTTAGC TERM 720 1162105 - 1162146 + g 75 -13.1 -2.60714 | gap 1, opp_overlap 1162108, overlap 1162104 CCTGGTAGCCTTTAA GCACCGTGGTG-ATGGCGTG CAG CACGGCATTCATGACGGTGC GTTCTACGGGTTTAG PD0958 1162870 - 1162310 - | hypothetical protein PD0959 1164012 - 1162867 - | hypothetical protein TERM 721 1163154 - 1163187 + g 74 -3.1 -4.94262 | opp_overlap 1163145 1163165, overlap 1163156 AACGGACCATCGTTG GACGGTCAAAATAGA TCTC TCTAGGTTGGCCGTG TTTGTTTTTAATCTG TERM 722 1163374 - 1163358 - G 75 -12.3 -2.90194 | AGTTTTCTAAGCAGA CGACGTG GCG CACGTCG GGTAGCCCCCAGAGC parE 1164470 - 1164162 - | plasmid stabilization protein parD 1164718 - 1164479 - | plasmid stabilization protein PD0962 1165209 - 1164856 - | hypothetical protein PD0963 1165847 - 1165206 - | hypothetical protein TERM 723 1165773 - 1165787 + g 72 -11.4 -3.10641 | opp_overlap 1165761 CAAGGCCACACGCAG GCGCTG GGC CAGCGC TTCGGTACTGCGTTG PD0964 1166674 - 1165844 - | hypothetical protein PD0965 1166988 - 1166671 - | hypothetical protein PD0966 1167758 - 1166988 - | hypothetical protein PD0967 1167816 - 1168142 + | hypothetical protein PD0968 1168139 - 1168420 + | hypothetical protein PD0969 1170368 - 1168479 - | hypothetical protein TERM 724 1170046 - 1170061 + g 80 -4.6 -5.00616 | overlap 1170048 CCGCGCCCCACTCCA TTGGCG GCTT CGCCTA TTTTTTGGGACAAGG TERM 725 1170048 - 1170059 + g 74 -7.2 -4.13561 | overlap 1170046 GCGCCCCACTCCATT GGCG GCTT CGCC TATTTTTTGGGACAA PD0970 1170938 - 1170516 - | hypothetical protein PD0971 1171372 - 1170935 - | hypothetical protein PD0972 1172878 - 1171382 - | hypothetical protein TERM 726 1171542 - 1171521 - G 74 -2.2 -5.03994 | overlap 1171536 GCCCAGACATAAAAA CCAGCG TCCAGGTAAT CGCCGG TGGCCAGCGCACCGA TERM 727 1172011 - 1172040 + g 85 -2.1 -5.53288 | opp_overlap 1171993 CGGTGCGATCACACC CTGATGCGTTGAG CTGT CTGAACACATTGG TTTTTTTAAATTCCA PD0973 1173349 - 1172879 - | hypothetical protein PD0974 1173716 - 1173336 - | hypothetical protein PD0975 1174170 - 1173697 - | hypothetical protein PD0976 1174538 - 1174167 - | hypothetical protein PD0977 1174891 - 1174538 - | hypothetical protein TERM 728 1174929 - 1174916 - R 100 -9.5 -5.75342 | opp_overlap 1174913 1174916 TTCTCCCAAAAAAAA GCGCC TCAG GGCGC TGGTGTCATGTGTGT PD0978 1175938 - 1174955 - | hypothetical protein TERM 729 1175497 - 1175477 - G 90 -11.9 -4.00042 | GTCCTCACCAAACAA CGCCACATC GTT GATATGGCG CTCATAGGCATCCAT PD0979 1176430 - 1175948 - | hypothetical protein TERM 730 1176246 - 1176259 + g 71 -9.5 -3.57462 | overlap 1176228 AGGATGGCGGCATCT GCCCC ATCG GGGGC TTTGCAGGTGGCGTC PD0980 1177651 - 1176440 - | hypothetical protein traN 1178493 - 1177648 - | plasmid-related protein TERM 731 1177845 - 1177859 + g 91 -7.2 -4.85129 | overlap 1177832 CTTGCCGGATTTCAT TGAATG CGG CATTCA TTTTTGATGTCTGAT PD0982 1178562 - 1178900 + | hypothetical protein PD0983 1178897 - 1179178 + | hypothetical protein PD0984 1180387 - 1179227 - | hypothetical protein TERM 732 1179664 - 1179653 - G 71 -7.2 -4.015 | overlap 1179650 GGACTGACCAAACAA CCGG GTTG CCGG AATATCCGCCGCCCC TERM 733 1180438 - 1180411 - R 73 -2 -5.15969 | gap 1, opp_overlap 1180412 1180434, overlap 1180412 CCGGAATCTAAAAAA TCACTG-AAAAGC CCT GCTTTTACTGTGT TTCAATGAATCGCAT TERM 734 1180500 - 1180486 - R 70 -10 -3.06261 | opp_overlap 1180485 1180486 ATATGGACATACACA GGGCAT GTC ATGCCC CTTTCACCACGCAAT PD0985 1181567 - 1180707 - | hypothetical protein pspA 1182764 - 1181580 - | hemagglutinin-like secreted protein TERM 735 1181899 - 1181914 + g 72 -11.8 -2.62263 | overlap 1181886 GAGTCGCTGCCCAGG GCGGCG GTGC CGCCGC TGCTGTGCACGGAGT TERM 736 1182021 - 1182035 + g 79 -2.8 -5.14563 | opp_overlap 1182006, overlap 1182009 1182006 GTCCTTGGGCGGGGC CCAG GTCTTGA CTGG TTTTTTCGTCACCAG PD0987 1183606 - 1182761 - | hypothetical protein TERM 737 1183938 - 1183953 + r 76 -11.8 -2.62263 | overlap 1183925 GAGTCGCTGCCCAGG GCGGCG GTGC CGCCGC TGCTGTGCACGGAGT TERM 738 1184010 - 1184028 + r 70 -8.8 -3.38812 | opp_overlap 1184003, overlap 1184008 TCATGGAAGGTGGCA TTGCCGGC ATA GCCGCCAA TCTTGTTAGCCACAA TERM 739 1184048 - 1184064 + r 71 -10.1 -3.15726 | opp_overlap 1184045, overlap 1184045 1184060 GTTAGCCACAAAGTC CTTGGGC GGG GCCCAGG TCTTGACTGGTTTTT TERM 740 1184060 - 1184074 + r 75 -2.8 -5.14563 | opp_overlap 1184045, overlap 1184048 1184045 GTCCTTGGGCGGGGC CCAG GTCTTGA CTGG TTTTTTCGTCACCAG TERM 741 1184090 - 1184116 + r 71 -10.1 -3.29043 | TTTTTTCGTCACCAG GGCAGCGGCCT CAGCA AGGCGGTTGCC TTCTGCCGCAGGGTT TERM 742 1185139 - 1185167 + r 70 -10.2 -2.57344 | overlap 1185123 1185138 GGTTAACGCTGCGGT CGGCATTGGCCA TCCAT TGGCCGGCGCCG CTTCTCAGGCCGCTG TERM 743 1185558 - 1185585 + r 76 -12 -2.63631 | TGGCGTTGCTGGGCG CTGGCCTGCAGG GTGT CTTGCAGGCTGG TGATGTCCAGGTTGC TERM 744 1185658 - 1185680 + r 73 -11.2 -2.71144 | CCTTCATGGTGGCAT CGCCGCCAAC GCT GATGGTGGCG TGATTGGCCACGGTG TERM 745 1188255 - 1188286 + r 80 -12.2 -3.02471 | TTGGGCGGCAATGTG TTGGTGGCCGCCGC TGGT GATGCGGCCGCCAA TCTGTGTGGTGGGGG TERM 746 1189829 - 1189851 + r 100 -15.6 -3.16191 | CTTGGGCGGTGAGGT CGGCGGCTTG GAG CAAGCCGCTG TTGGTCAGGGTGTCG TERM 747 1191224 - 1191240 + r 71 -10.1 -3.29325 | overlap 1191222 GGTGGGCGGGGCCGG CGGCATC CAG GGTGCCG TGTTGGTTGTGGAGG TERM 748 1192603 - 1192629 + r 70 -9.4 -3.39036 | gap 1 ATGGCGTCGATGGCA CCGCCGGCGGT GATGTG GCCGCCG-CGG TTGTCAATGGTCTGT PD0989 1194700 - 1194458 - | hypothetical protein int 1195988 - 1194756 - | phage-related integrase TERM 749 1195699 - 1195677 - G 90 -5.4 -5.16237 | opp_overlap 1195677 AATCTCACGAAAAAA CCGCTCGGCA AAG TCCCGCACGG TCATTGCATCTGCCG PD0991 1196420 - 1196130 - | hypothetical protein PD0992 1197952 - 1196402 - | hypothetical protein TERM 750 1197655 - 1197644 - G 72 -3.6 -4.75308 | ACTAATATGCAAAAA CCGC GCAT ACGG ATTCAGCGCCAACCC PD0993 1198301 - 1197942 - | hypothetical protein PD0994 1199068 - 1198607 - | hypothetical protein PD0995 1199387 - 1199058 - | hypothetical protein TERM 751 1199371 - 1199346 - G 78 -6.7 -4.64591 | CAAGCACACATAAAA CGCCTCCTTCC ACCA GGTAGGCAGCG CCGCAATATCAATCA lycV 1199991 - 1199380 - | phage-related lysozyme TERM 752 1199915 - 1199902 - G 100 -9.5 -5.1101 | opp_overlap 1199902, overlap 1199904 CCAGTACGCAAAAAA CCGCC CGAA GGCGG TCGCTGGCTTTGAAT TERM 753 1199960 - 1199939 - G 100 -8.7 -6.09888 | TTTGAATAAAAAAAA GCCCTGC TGAGGTGG GCAGGGC GCGAGTAAATCATTC PD0997 1200419 - 1200081 - | hypothetical protein PD0998 1200672 - 1200406 - | hypothetical protein PD0999 1201559 - 1200861 - | hypothetical protein TERM 754 1202169 - 1202212 + r 83 -9 -4.25104 | gap 1, opp_overlap 1202169 CCCCCGATTCAATCA GCTCATGCGCCTGATTCCG GCTGATG TGGAATTCGGC-CATGAGC TTTTCCTCACGGGCG PD1000 1203721 - 1202816 - | hypothetical protein PD1001 1204488 - 1203700 - | hypothetical protein PD1002 1205117 - 1204485 - | hypothetical protein TERM 755 1204916 - 1204942 + g 78 -13.8 -2.62616 | opp_overlap 1204930 1204934 TGCCACTTCCGAACC CCTTGGTGGTCA AAT TGACCACCAAGC TCATCTCGACGGTGA TERM 756 1205303 - 1205283 - R 86 -4 -5.60993 | opp_overlap 1205265 GCGGGCACAAAAAAA CCGCAT GATTTTCGG ATGCGG GTACCGCTAGGCTCG PD1003 1205643 - 1205395 - | hypothetical protein PD1004 1205808 - 1206569 + | hypothetical protein PD1005 1206621 - 1207310 + | phage-related repressor protein fic 1207972 - 1207361 - | cell filamentation protein TERM 757 1207440 - 1207453 + g 71 -8.1 -3.81951 | overlap 1207432 GAATCCCCGTTGTAA GCGTC GATT GACGC TTTAATCATATCCGC TERM 758 1207653 - 1207640 - G 76 -3.1 -4.98522 | AAGGCCACACAAAAA TCGCT CTTT AGCAA GCTGCCCAAAGATCT TERM 759 1207889 - 1207861 - G 100 -9.5 -5.04249 | TTCGCAAAAAAGAAA GGGTGGACTCTAT TTT ATCGAGCCCCCCC TGATCCCTGATTCCA PD1007 1208465 - 1209085 + | hypothetical protein PD1008 1209082 - 1209495 + | hypothetical protein PD1009 1209492 - 1209893 + | hypothetical protein PD1010 1209927 - 1210403 + | hypothetical protein PD1011 1210638 - 1210982 + | hypothetical protein PD1012 1211022 - 1211843 + | hypothetical protein TERM 760 1212382 - 1212369 - g 75 -5.9 -4.58663 | overlap 1212370 AGCATGTGGCAAAAA CGCCC CTTT GGGCA GTTGGAGAAATGCGC PD1013 1211859 - 1212785 + | hypothetical protein TERM 761 1214140 - 1214125 - g 73 -10.4 -3.31263 | ACGCGAGCGCCAGAA CACCGC AGCA GCGGTG CCCGTCCACGTGCCG PD1014 1212782 - 1214434 + | hypothetical protein lpxD 1214463 - 1215227 + | UDP-3-O-(R-3-hydroxymyristoyl)-glucosamine N-acyltransferase TERM 762 1215298 - 1215318 + F 83 -4 -5.40072 | opp_overlap 1215291 1215312 CGTACATAGCGGTAC CCGCAT CCGAAAACC ATGCGG TTTTTTTACGCCCGC PD1016 1215488 - 1216108 + | hypothetical protein ssb 1216175 - 1216621 + | single-strand DNA-binding protein TERM 763 1216679 - 1216689 + G 74 -6.8 -4.27886 | CTACGAGACATGCCC CCAG CCG CTGG TTTATGTCTTTCCAG PD1018 1216640 - 1216888 + | hypothetical protein int 1216888 - 1217907 + | phage-related integrase ntrB 1218042 - 1219097 + | two-component system, sensor protein ntrC 1219090 - 1220517 + | two-component system, regulatory protein TERM 764 1221119 - 1221140 + F 83 -13.7 -2.72661 | GAGGAGTGTGGCCAC GGCCAGCGG CAAT TCGCTGGCC TGCTTGAGGCTGGTG traE 1221401 - 1222348 + | truncated conjugal transfer protein amtB 1223947 - 1222493 - | ammonium transporter TERM 765 1223595 - 1223615 + g 71 -4.7 -4.56597 | opp_overlap 1223614, overlap 1223596 AACACCACACCAATT TGTACCATC ATT GATAGTACG TTTTTAGAACGCAAC glnB 1224275 - 1223937 - | nitrogen regulatory protein P-II TERM 766 1224517 - 1224482 - R 72 -6.2 -4.3351 | opp_overlap 1224474, overlap 1224484 AGAAAATGGAAGAAA TAGTGATGGTGGAA GGTAAAAA TTCCACCATCGCTG TCACTACATACTTAG TERM 767 1224515 - 1224484 - R 76 -8.8 -3.75005 | opp_overlap 1224474, overlap 1224482 AAAATGGAAGAAATA GTGATGGTGGAA GGTAAAAA TTCCACCATCGC TGTCACTACATACTT glnA 1225938 - 1224529 - | glutamine synthetase TERM 768 1226669 - 1226701 + G 85 -2.6 -5.47846 | TTTCTAGCGATGTTA CTCGGTCTCAGC AAACGTTCA GCTGCAGCCGAG TTTTCTTTTTTAGTT uppP 1226162 - 1226947 + | undecaprenyl pyrophosphate phosphatase PD1028 1227823 - 1227110 - | hypothetical protein TERM 769 1227983 - 1227963 - H 86 -2.6 -5.66868 | gap 1, overlap 1227968 AATGAATCAAAAAAA TTGAAC-GC TGCT GCAGCTCAA CGAAGAATCTTTCAT PD1029 1228311 - 1229240 + | hypothetical protein TERM 770 1229743 - 1229716 - g 70 -7 -4.21194 | gap 1 GCTGACCACTCAAAA CGGCCTGATGCAA CGC TTGCA-CGAGCCG CGCTACAGTGCGGTG TERM 771 1230020 - 1230037 + G 81 -7.1 -4.82901 | TATTCCGTAGTCACC GTTGAAT CCAT ATTCAAC TTTTTATCAGAACGC PD1030 1229276 - 1230127 + | hypothetical protein TERM 772 1230135 - 1230149 + G 76 -5.6 -4.78077 | overlap 1230136 CACCATGAATTATTC ACGCCT TTT AGGCGC TTTCTTTTCATTGGG TERM 773 1230166 - 1230178 + G 80 -4.9 -5.05782 | TTCTTTTCATTGGGA TCATT CGG AATGA TTTTTTCGAGTCCCT PD1031 1230124 - 1230678 + | hypothetical protein TERM 774 1230744 - 1230780 + F 71 -10.1 -3.27212 | opp_overlap 1230748 1230749, overlap 1230742 1230741 1230745 GCCTAACGATGACGA CCAATCCTAGATCACGC AAT GCGTGATCTAGGGACGC TGATTTTATTCACTT TERM 775 1230745 - 1230779 + F 83 -13.6 -2.55242 | opp_overlap 1230748 1230749, overlap 1230744 1230742 1230741 CCTAACGATGACGAC CAATCCTAGATCACGC AAT GCGTGATCTAGGGACG CTGATTTTATTCACT TERM 776 1230776 - 1230748 - f 100 -16.1 -3.2396 | opp_overlap 1230745 1230744 1230742 1230741, overlap 1230749 AACGATGACGACCAA TCCTAGATCACGC AAT GCGTGATCTAGGG ACGCTGATTTTATTC TERM 777 1230775 - 1230749 - f 100 -19.6 -2.53894 | opp_overlap 1230745 1230744 1230742 1230741, overlap 1230748 ACGATGACGACCAAT CCTAGATCACGC AAT GCGTGATCTAGG GACGCTGATTTTATT TERM 778 1231322 - 1231332 + G 76 -3.2 -5.00884 | GCTTTGGTGCCGATA CGCT AGG AGTG TTTTTTGAAAAGCCT PD1032 1231117 - 1232322 + | trans-2-enoyl-CoA reductase TERM 779 1232346 - 1232382 + F 87 -10.3 -4.06778 | GTCTGATGTGACTGT GGAACATGGGTACAT GCCTCTA GTTTACCCATGTTCC TTTGGATTTTTTGGT PD1033 1232521 - 1232985 + | disulphide isomerase ubiB 1234833 - 1233175 - | putative ubiquinone biosynthesis protein UbiB PD1035 1235477 - 1234830 - | hypothetical protein TERM 780 1236299 - 1236266 - g 71 -4.5 -4.57073 | opp_overlap 1236266 CACGCGGGGTAAAAA TCATCGGTGCCACTG CACA CTATGTCACCCATGA TTTGGACGAAGGTCC purU 1235626 - 1236477 + | formyltetrahydrofolate deformylase TERM 781 1236658 - 1236668 + F 73 -4 -4.76802 | ATCTAAGCATATCCT TCAT CAC ATGA TTTCTTCTTTTTCCC TERM 782 1237148 - 1237117 - g 72 -11.6 -3.05596 | overlap 1237121 1237139 TACCTGTTGATCGAA TCCACAGGCATTGG CGAG CCAATGCCTGTCGC GGCAACATTTGCTGT TERM 783 1237144 - 1237121 - g 83 -15.4 -2.54896 | overlap 1237117 1237139 TGTTGATCGAATCCA CAGGCATTGG CGAG CCAATGCCTG TCGCGGCAACATTTG TERM 784 1237159 - 1237179 + G 76 -5.4 -4.79451 | gap 1 GTCGCGGCAACATTT GCTGTGCGG GATG CCG-ACGGC TTTTGTCTTTCAGAT PD1037 1236796 - 1238124 + | hypothetical protein PD1038 1238262 - 1238930 + | hypothetical protein PD1039 1238973 - 1240145 + | ATPase ohr 1240334 - 1240765 + | organic hydroperoxide resistance protein TERM 785 1241046 - 1241071 + G 70 -9.7 -3.34895 | CCGGAGGGAGTGGGT TCCTCGGCGAA GCAC TATGCCGAGGA TTACTTAAGCGTGGC wcaG 1241015 - 1242013 + | nucleoside-diphosphate-sugar epimerase TERM 786 1242841 - 1242826 - g 76 -3.3 -5.06414 | overlap 1242802 TCCGGGCAAGAAAAA TACGA ATACGA TCGTA GCAAAGCGCCATGGC prc 1242388 - 1244571 + | tail-specific protease TERM 787 1244575 - 1244612 + F 100 -10.6 -4.77896 | opp_overlap 1244573, overlap 1244577 TGGGCCAATTGAATT GCCAGTAGTGTTGGGT AAACCA GCCCAACACTACAGCC TTTTTGACTTGCTTA TERM 788 1244577 - 1244610 + F 76 -11.8 -2.66307 | opp_overlap 1244573, overlap 1244575 GGCCAATTGAATTGC CAGTAGTGTTGGGT AAACCA GCCCAACACTACAG CCTTTTTGACTTGCT TERM 789 1244691 - 1244703 + F 79 -4.1 -5.15969 | TATAGATAGCCAGTG CTGGA ACC TTCAG TTTTTTCAATTGGAC TERM 790 1244939 - 1244916 - f 76 -8.8 -3.72893 | gap 1, opp_overlap 1244916 CAGGCTTTGATCAAA CCCCGCATTGG CAA CCT-TGCGGGG TTTTGTTTTTTAGTA TERM 791 1244916 - 1244939 + F 100 -8.8 -5.45813 | gap 1, opp_overlap 1244916 CAGGCTTTGATCAAA CCCCGCATTGG CAA CCT-TGCGGGG TTTTGTTTTTTAGTA TERM 792 1245403 - 1245392 - g 71 -4.4 -4.65263 | opp_overlap 1245392 ATGGTCCAAAAGAAA CTCT ACGA AGAG GTTTTAGCACCAAAC TERM 793 1245436 - 1245424 - g 77 -7.7 -4.37506 | opp_overlap 1245423 1245424 AGCACCAAACATAAA GCAAG GTG CTTGC CTATTATTCGCACAT ilvC 1245149 - 1246165 + | ketol-acid reductoisomerase TERM 794 1246692 - 1246680 - g 73 -10.5 -3.41602 | opp_overlap 1246679 CGTATCGCACGAGAA GGCCG CCC CGGCC CTGTCCTGATCGATT ilvG 1246212 - 1247963 + | acetolactate synthase 2 catalytic subunit ilvM 1247947 - 1248192 + | acetolactate synthase isozyme II small sbunit TERM 795 1248517 - 1248505 - g 73 -9.1 -3.89524 | ACCGGATCCTATAAA GTGCG CGG CGCAC TGAACGCAATGTTAG tdcB 1248310 - 1249362 + | threonine dehydratase leuA 1249417 - 1250976 + | 2-isopropylmalate synthase TERM 796 1251050 - 1251018 - T 79 -10.7 -3.53091 | opp_overlap 1251024 1251043, overlap 1251039 1251043 AGTTCCTCTCCGAAA CATAGAGATTCAGGT ACA AACTGAAGCTCTATG GGCTTCCCTCAGGAA TERM 797 1251151 - 1251163 + T 89 -9.1 -4.55887 | AATGAGCGGCAGCCC CCGTG ATC CACGG TTTGTATTTTTCAGC TERM 798 1251199 - 1251187 - T 72 -4.8 -4.59773 | opp_overlap 1251187 TTTCAGCTTTAAAAA GTGG GCGAT CCAC ACTTTCAATAACGGA fabH 1252419 - 1251445 - | 3-oxoacyl-(acyl carrier protein) synthase III TERM 799 1252468 - 1252447 - R 100 -10.1 -5.19261 | gap 1, opp_overlap 1252447 AAATTTATTAAAAAA GCCGCG-CCG GGA CGGACGCGAC TTTCAAAGCACATGC rpmF 1252708 - 1252514 - | 50S ribosomal protein L32 PD1050 1253349 - 1252825 - | hypothetical protein PD1051 1255448 - 1253601 - | hypothetical protein TERM 800 1253736 - 1253725 - G 71 -5.8 -4.25283 | opp_overlap 1253725 ACTTGTGCACGAAAA CCCA CACC TGGG TGATTGGGATCCGTC TERM 801 1254588 - 1254570 - G 75 -3.8 -4.90013 | overlap 1254572 GAACCCAAGCAAAAA GATCCCCA CAG TGGAGATA CCACCGAGCAAACCG TERM 802 1255214 - 1255194 - G 70 -3.1 -4.77036 | overlap 1255196 GGCGATCAGCAAAAA TGGCAAGCG CAA CGCCAGCAA ATGATAGCCGCCCAG moxR 1255458 - 1256411 + | methanol dehydrogenase regulatory protein PD1053 1256414 - 1257373 + | hypothetical protein PD1054 1257366 - 1259423 + | hypothetical protein slp 1259356 - 1259838 + | outer membrane protein Slp precursor PD1056 1260258 - 1259905 - | histidine triad-like protein recR 1260920 - 1260324 - | recombination protein RecR TERM 803 1261071 - 1261027 - R 100 -11 -5.06585 | opp_overlap 1261028 1261036, overlap 1261036 TAAAGGATACAAAAA GGACA-AGAATGGTTTGCGATA AAA CATCGCAAACCATGCTATG-CC TTCCTACACAAAGCA TERM 804 1261028 - 1261071 + r 74 -10.5 -3.14132 | gap 1, opp_overlap 1261027 1261036, overlap 1261036 AAAGGATACAAAAAG GACA-AGAATGGTTTGCGAT AAAAC ATCGCAAACCATGCTATGCC TTCCTACACAAAGCA TERM 805 1261036 - 1261062 + r 83 -13.9 -2.67209 | opp_overlap 1261036 1261027, overlap 1261028 CAAAAAGGACAAGAA TGGTTTGCGAT AAAAC ATCGCAAACCA TGCTATGCCTTCCTA TERM 806 1261062 - 1261036 - R 100 -14.6 -3.98907 | opp_overlap 1261028 1261036, overlap 1261027 CAAAAAGGACAAGAA TGGTTTGCGATA AAA CATCGCAAACCA TGCTATGCCTTCCTA PD1058 1261433 - 1261113 - | hypothetical protein dnaX 1263071 - 1261440 - | DNA polymerase III subunits gamma and tau TERM 807 1262106 - 1262122 + g 70 -6.5 -4.1552 | CTGGTACCAAAGTTG CACAACC TCC GGCTGTG TTTGTTCGGCCAATA TERM 808 1263394 - 1263428 + H 87 -10.1 -4.25104 | gap 1, opp_overlap 1263402, overlap 1263397 1263402 1263413 1263416 ATGTAGTGGGCGTAT TGCGAGAAGGCCGTCT ATTG AGGCGGCCTT-TCTCA TTTTGATACGCCGCA TERM 809 1263397 - 1263427 + H 81 -12.7 -3.14848 | gap 1, opp_overlap 1263402, overlap 1263394 1263402 1263413 1263416 TAGTGGGCGTATTGC GAGAA-GGCCGTCT ATTG AGGCGGCCTTTCTC ATTTTGATACGCCGC TERM 810 1263402 - 1263421 + H 91 -11.4 -4.22407 | opp_overlap 1263402, overlap 1263397 1263394 1263413 1263416 GGCGTATTGCGAGAA GGCCGTCT ATTG AGGCGGCC TTTCTCATTTTGATA TERM 811 1263421 - 1263402 - H 70 -9.2 -3.31144 | opp_overlap 1263397 1263394 1263402 1263413 1263416 GGCGTATTGCGAGAA GGCCGTCT ATTG AGGCGGCC TTTCTCATTTTGATA dinD 1263640 - 1264200 + | DNA-damage-inducible protein D TERM 812 1264632 - 1264576 - f 95 -13.2 -4.36914 | opp_overlap 1264578, overlap 1264579 CTCTGCCGCAGAAAA TACCTACCTATATGTGCAGGTGGCAT GATTA ATGCCACCTGCACATAAATGCACCTA GTTGCGCCAGCACCG TERM 813 1264629 - 1264579 - f 87 -14.9 -2.8733 | opp_overlap 1264578, overlap 1264576 TGCCGCAGAAAATAC CTACCTATATGTGCAGGTGGCAT GATTA ATGCCACCTGCACATAAATGCAC CTAGTTGCGCCAGCA TERM 814 1266485 - 1266463 - f 81 -12.2 -3.25356 | opp_overlap 1266461, overlap 1266458 TCACAACCAATCTAA TTTTGATCTC ATT GAGATCAAAA ACTTGACTTAATTAT PD1063 1266632 - 1267204 + | hypothetical protein TERM 815 1267288 - 1267264 - T 100 -18.7 -2.88999 | opp_overlap 1267264 TTCGCACATATCACA GCCCGATCCAT CCG ATGGATCGGGC TTTTGTGCCATAGGC TERM 816 1267264 - 1267288 + T 100 -18.7 -4.4009 | opp_overlap 1267264 TTCGCACATATCACA GCCCGATCCAT CCG ATGGATCGGGC TTTTGTGCCATAGGC gpsA 1268393 - 1267353 - | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase secB 1268932 - 1268414 - | preprotein translocase subunit SecB TERM 817 1268543 - 1268528 - G 77 -4.6 -4.86731 | opp_overlap 1268529, overlap 1268529 TGGTTGCAAATAAAA TGGTGG GAAA CCACCT ATCTGGATAAGATCG TERM 818 1268852 - 1268842 - G 73 -5.4 -4.65933 | GAGCCTCAAAAGAAA CATC CTT GATG TAAATCTTCTCGATA PD1066 1269498 - 1269058 - | hypothetical protein PD1067 1270014 - 1269577 - | hypothetical protein hemD 1270076 - 1270849 + | uroporphyrinogen-III synthase PD1069 1270846 - 1271877 + | hypothetical protein hemY 1271874 - 1273043 + | porphyrin biosynthesis protein birA 1273448 - 1274401 + | biotin--protein ligase baf 1274398 - 1275126 + | pantothenate kinase TERM 819 1275211 - 1275225 + G 72 -11.4 -3.05844 | GTGGAGGAACCAGTC GGCACC AAA GGTGCC TGTTCCCGTGGCAGC PD1073 1275137 - 1275769 + | hypothetical protein int 1277236 - 1276043 - | phage-related integrase PD1076 1277508 - 1277236 - | hypothetical protein PD1077 1279119 - 1278577 - | fimbrillin TERM 820 1279260 - 1279247 - H 73 -2.4 -5.1861 | overlap 1279249 CGTATCAGGAAAAAA GAGA GATAAG TCTC AGAAAATCCCGTGAT PD1078 1279530 - 1279742 + | hypothetical protein PD1080 1280208 - 1280933 + | hypothetical protein mutS 1283576 - 1280970 - | DNA mismatch repair protein TERM 821 1282083 - 1282106 + g 71 -7.4 -3.92522 | gap 1, overlap 1282062 GTTAGTCAGTGTCTG GCGCCGCGTGT AAT GCAC-CGGTGC TTTGTCGGCTTGGCC TERM 822 1283476 - 1283461 - G 73 -5.4 -4.61527 | AAAAGCTCGTAAAAA TCTCCC ATAC GGAAGA ACAAAAGTAAGTCTG TERM 823 1283952 - 1283937 - R 74 -10.4 -3.20382 | opp_overlap 1283936 1283935 TTGTATAGCGACCAA GGGCCA ACAA TGGCCC AATTTGGAATCGGCG mtgA 1284746 - 1284009 - | monofunctional biosynthetic peptidoglycan transglycosylase hslO 1284820 - 1285680 + | heat shock protein HSP33 TERM 824 1285868 - 1285885 + G 79 -11.3 -3.72324 | TACTCCTTGCACTGA TAGCCGC CCTA GCGGCTA TTCTTCCTGCGAGTG PD1084 1285753 - 1286703 + | hypothetical protein PD1086 1287820 - 1287476 - | hypothetical protein TERM 825 1287974 - 1287962 - R 73 -7.7 -4.14725 | GATGGAAATGAGAAA TTGCG GAG CGCAA ACCACCTTGGATTCT PD1087 1288355 - 1288023 - | hypothetical protein TERM 826 1288142 - 1288170 + g 83 -10.3 -3.96148 | opp_overlap 1288138, overlap 1288143 1288168 TACCCAGACAAGCCG CGAACTCGGGCTG CGA TAGCTCGAGTTCC TTTCTCATGAAACGG TERM 827 1288143 - 1288169 + g 81 -13.8 -2.97475 | opp_overlap 1288138, overlap 1288142 1288168 ACCCAGACAAGCCGC GAACTCGGGCTG CGA TAGCTCGAGTTC CTTTCTCATGAAACG TERM 828 1288421 - 1288405 - R 100 -13.7 -4.10453 | opp_overlap 1288405, overlap 1288394 CAAAGTGCCGGAAAA GGCGCTG CTC CAGCGCC TCGCGGGTGGAGCGG D 1289629 - 1288547 - | phage-related tail protein TERM 829 1288645 - 1288670 + g 100 -10.5 -4.96848 | gap 1 GGTTGTTGGGCCGCT CGGCT-TCGATG CTA CATCGGTAGCCG TTTTTGTCTAGGCCA TERM 830 1289273 - 1289283 + g 78 -2.4 -5.22039 | TGTGGTTCCGGCGGG CCAG GAG CGGG TTTTTTGGGTTTGCA TERM 831 1289413 - 1289401 - G 93 -10.5 -4.39166 | opp_overlap 1289401 CGCTACACACGAAAA CGCCC ATT GGGCG TAATTGGCCGTCATA X 1289838 - 1289620 - | phage-related tail protein U 1290317 - 1289835 - | phage-related tail protein PD1091 1292533 - 1290314 - | hypothetical protein TERM 832 1291499 - 1291516 + g 75 -6.3 -4.67904 | gap 1 CAGAATCATGGACTG GGGATCGG TGA CC-ATCCC TTTTTGGAGTTGGTC TERM 833 1291898 - 1291886 - G 74 -10.5 -3.59979 | GGCGGGCATTTCAAA GGCGG TGG CCGCC ATGGCCGAGACGCGG TERM 834 1292103 - 1292133 + g 81 -11.8 -3.57144 | overlap 1292104 1292130 TGATCGCGTGCGCCA TCGACCTGCTTGGC AAC GCCAAGCATGGCGG TTTCAAACTCAACCG TERM 835 1292104 - 1292132 + g 76 -13.1 -2.74144 | overlap 1292103 1292130 GATCGCGTGCGCCAT CGACCTGCTTGGC AAC GCCAAGCATGGCG GTTTCAAACTCAACC PD1092 1292947 - 1292660 - | hypothetical protein FII 1293459 - 1292950 - | hypothetical protein TERM 836 1293340 - 1293353 + g 78 -6.7 -4.63184 | CAGCATGCCGCCACC CCGAA ACTC TTCGG TTTTTAAGGTCAATT FI 1294637 - 1293459 - | contractile tail sheath protein PD1095 1296294 - 1294702 - | hypothetical protein TERM 837 1295440 - 1295483 + g 95 -5.9 -5.40072 | CAGTGCGTCACCAAT CAGGGTGCCTTGGGATTGG AGCGAG CCGGTCATGAGGCTTCCTG TTTTTTTCACCAGAG I 1296859 - 1296302 - | phage-related tail protein J 1297748 - 1296852 - | phage-related baseplate assembly protein W 1298068 - 1297745 - | phage-related baseplate assembly protein TERM 838 1298185 - 1298203 + H 79 -11.8 -3.19091 | opp_overlap 1298184 GTGCCTTGGAATTAT TGAGCTAC AAT GTAGCTCA TTCCTCACTGGGTAT dinJ 1298233 - 1298496 + | DNA-damage-inducible protein TERM 839 1298553 - 1298527 - g 73 -10.8 -3.41527 | overlap 1298515 CAAGCGCGACTACAA GCGCGAAGCTAA GGG CCAGCATCGCGC CACGCTTGATGAGGA PD1100 1298483 - 1298764 + | hypothetical protein V 1299388 - 1298801 - | phage-related baseplate assembly protein PD1102 1299927 - 1299385 - | hypothetical protein PD1103 1300424 - 1299903 - | hypothetical protein TERM 840 1300226 - 1300254 + g 72 -3.8 -4.68103 | gap 1, overlap 1300230 TTTGGTCGCGTTGTC GATAGGTGCGCAG GCGG CGGCGCA-CGATC TTTTGTTGGAGTTGC PD1104 1300744 - 1300421 - | hypothetical protein TERM 841 1300645 - 1300633 - G 75 -6.3 -4.56775 | AGGTCGCGTCAAAAA CAATG GTG CATTG ATGGACGCGCCCCGT PD1105 1301004 - 1300744 - | hypothetical protein PD1106 1302896 - 1301022 - | hypothetical protein TERM 842 1302839 - 1302857 + g 81 -12.4 -3.54424 | opp_overlap 1302832 ATAGGACATCGGCAT GGCGGTAC TGG GTGCCGCC TTTGCGAAGGTCCCG B 1304478 - 1302952 - | phage-related portal protein TERM 843 1303400 - 1303422 + g 74 -9.8 -3.76224 | GAGAGATCCATGCCC GCAGCCAAGC TTT GTTTGGCGGC TTTGGTGAATAAGCC TERM 844 1304108 - 1304142 + g 71 -4.3 -4.61566 | gap 2, overlap 1304125 CAGGTTTCAATGGCG TCGTTGATGGCGGTGTC CAG GGCACCGCTG-C-GCGA TTTTCTGCTTTGGGC PD1108 1305026 - 1304475 - | hypothetical protein PD1109 1306982 - 1305030 - | phage-related terminase large subunit nohA 1307550 - 1306975 - | phage-related packaging protein TERM 845 1307590 - 1307553 - R 100 -16.3 -3.39884 | overlap 1307543 AAACACCACGCACAA TGGAAGCCCCGCGGAGT TTCG ACCCCGCAGGCCTCCCA CATCAGGAAGGACCC PD1111 1308368 - 1307907 - | hypothetical protein PD1112 1308669 - 1308358 - | hypothetical protein PD1113 1309174 - 1308680 - | phage-related lysozyme PD1114 1309758 - 1309141 - | hypothetical protein TERM 846 1309231 - 1309241 + gr 71 -6.8 -4.18197 | ATCCTGGGCATACGT CCTG TGA CAGG TTTTCCGTGGCGGGT TERM 847 1309952 - 1309966 + r 73 -2.2 -5.26316 | TTTCCTATTTCTCTC TATATA TGC TGTATA TTTTTTATACAATGA TERM 848 1310167 - 1310109 - R 100 -16.1 -4.62069 | gap 1, opp_overlap 1310110, overlap 1310113 1310116 TCGCCACCCCAAAAA CGAACAACGCCCTCTGCACCCCGCCAAC AGCC ATTTGCGAGATGCAGAGGGCGCTGCAC- TACTTTTCGTTACAG TERM 849 1310110 - 1310167 + r 81 -12.6 -3.18268 | opp_overlap 1310109 1310113 1310116 CGCCACCCCAAAAAC GAACAACGCCCTCTGCACCCCGCCAA CAGCCA TTTGCGAGATGCAGAGGGCGCTGCAC TACTTTTCGTTACAG TERM 850 1310164 - 1310113 - R 100 -24.6 -3.81926 | opp_overlap 1310110, overlap 1310109 1310116 CACCCCAAAAACGAA CAACGCCCTCTGCACCCCGCCAAC AGCC ATTTGCGAGATGCAGAGGGCGCTG CACTACTTTTCGTTA TERM 851 1310161 - 1310116 - R 100 -22.7 -4.0257 | opp_overlap 1310110, overlap 1310113 1310109 CCCAAAAACGAACAA CGCCCTCTGCACCCCGCCAAC AGCC ATTTGCGAGATGCAGAGGGCG CTGCACTACTTTTCG PD1115 1312636 - 1310177 - | hypothetical protein TERM 852 1310237 - 1310247 + g 71 -8.2 -3.91597 | CATCCGGCGCTTTCC CCCC TCA GGGG TTTCGTATATATGCT TERM 853 1310606 - 1310625 + g 77 -8.6 -4.16016 | gap 1, overlap 1310609 ATGGTCTATGGGGTA TTG-GGCGG CCC CCGCCTCAA TTTCTTCAGCGGTGC TERM 854 1312729 - 1312760 + r 100 -13.7 -4.65895 | overlap 1312742 TTTCACCTTTGTTTT GGGCGAGTTGAGG CCACCC CCTCAGCCCGCCC TTTTTAACTGCGGGG PD1116 1313410 - 1312844 - | hypothetical protein TERM 855 1313186 - 1313152 - G 74 -11.5 -3.24017 | gap 1, overlap 1313147 1313154 AATCCGAGAAGGCAA CAGCCTCTGCCCTACG GCTC CGTAGGACA-AGGCGG TATAAGCCCCCTTCG TERM 856 1313184 - 1313154 - G 83 -12.7 -3.18054 | gap 1, overlap 1313147 1313152 TCCGAGAAGGCAACA GCCTCTGCCCTACG GCTC CGTAGGACA-AGGC GGTATAAGCCCCCTT TERM 857 1313233 - 1313255 + g 74 -10.6 -3.46602 | overlap 1313234 ATTGATTTCCTTTGA TGGTACTCAC AAT GTGAGTACCC TTCTGATGTGCACCA TERM 858 1313234 - 1313254 + g 81 -14.1 -2.67747 | overlap 1313233 TTGATTTCCTTTGAT GGTACTCAC AAT GTGAGTACC CTTCTGATGTGCACC PD1117 1313793 - 1313407 - | hypothetical protein PD1118 1314176 - 1313790 - | hypothetical protein TERM 859 1313979 - 1313989 + g 71 -8.2 -3.88137 | GCATGGGTTTCGGGT GCGG GTA CCGC TTTGTCCGGAGTTCT PD1119 1314559 - 1314173 - | hypothetical protein PD1120 1314972 - 1314556 - | hypothetical protein TERM 860 1314748 - 1314728 - G 95 -5.3 -5.42259 | GCAGGCGTAAAAAAA CCGCATGGG TTT CGGATGCGG GTACCGCTAGCTACG TERM 861 1315128 - 1315108 - H 83 -4 -5.42259 | opp_overlap 1315125 TCAGGCGTAAAAAAA CCGCAT GGTTTTCGG ATGCGG GTACCGCTGTTTCCG PD1121 1315331 - 1315663 + | hypothetical protein PD1122 1315981 - 1315733 - | hypothetical protein PD1123 1316146 - 1316883 + | hypothetical protein PD1124 1317122 - 1317880 + | hypothetical protein PD1125 1318041 - 1318580 + | hypothetical protein TERM 862 1318938 - 1318996 + G 71 -12.4 -2.52464 | opp_overlap 1318952 1318955 1318985 1318988, overlap 1318971 GATGTTGAAAGCTTG CGGGCTGACTTAAATAAGTCGGCAGGTG AAC TGCTGGCCGACTTAAACAAGTCAGCCGG TGAATTGCGGGCAGA PD1126 1318809 - 1319249 + | hypothetical protein TERM 863 1319294 - 1319309 + F 100 -11.8 -6.3578 | opp_overlap 1319290 1319288 1319294 CCTTAAAAACATCAA CCCCGC GCTG GCGGGG TTTTTTTTTTCGCCT TERM 864 1319309 - 1319294 - f 86 -11.8 -3.60925 | opp_overlap 1319294, overlap 1319290 1319288 CCTTAAAAACATCAA CCCCGC GCTG GCGGGG TTTTTTTTTTCGCCT TERM 865 1319368 - 1319408 + F 79 -12.2 -2.88544 | opp_overlap 1319368 1319378 AAATTTAATCGATAA TTACCTAAAAGGTTATTG AAAGG TAATAACCCTTTAGGTAA TATCTCCCCATCGCC TERM 866 1319408 - 1319368 - f 90 -13.7 -3.43965 | opp_overlap 1319368, overlap 1319378 AAATTTAATCGATAA TTACCTAAAAGGTTATT GAAAGGT AATAACCCTTTAGGTAA TATCTCCCCATCGCC PD1127 1319467 - 1319856 + | hypothetical protein TERM 867 1319895 - 1319876 - g 77 -8.5 -4.08767 | opp_overlap 1319876 CGCACCCCTCGAAAA CGCCCCC ACCCCA GAGGGCG TTAGGTTCACCAAAA PD1128 1319853 - 1320317 + | hypothetical protein TERM 868 1320854 - 1320869 + G 72 -2.6 -4.84359 | gap 1, overlap 1320856 TGGCGCTGCTGTGTT CA-TGAG TTC CTCACTG TTTTTCTGCCGGTGG PD1129 1320314 - 1321159 + | hypothetical protein PD1130 1322066 - 1322275 + | hypothetical protein PD1131 1322272 - 1323549 + | hypothetical protein TERM 869 1323656 - 1323609 - g 71 -6.4 -4.2528 | gap 2, opp_overlap 1323621 1323622 1323626 TTTGAACCCAAGAAA GTCAATGGCGAAGGCGAGGCCG CCTTCT CGGCCT-GC-TTCCTCATCGAC CCTGCTGACCCGCAA TERM 870 1323759 - 1323773 + G 72 -11.4 -3.09516 | opp_overlap 1323768 AAACAGATGCGTATG GGCGAC AGA GTCGCC TTGCATGATGGCGAC PD1132 1323549 - 1324115 + | hypothetical protein TERM 871 1324157 - 1324147 - f 74 -8.2 -3.86202 | TGGCAGCACACGAAA CGGC AGG GCCG AGAAACGCGCACCCT TERM 872 1324550 - 1324529 - g 83 -10.1 -4.11216 | GCCGCAGCTCGAAAA GCGGGCCAA CACA TTGTCCCGC TGCATCACGCGCCTT PD1133 1324202 - 1325713 + | hypothetical protein TERM 873 1326827 - 1326847 + G 79 -12.5 -2.90075 | overlap 1326829 TGTCATGGCGCTGAC CAGCAGCGC GCT GCGCAGCTG TCTGATTGCACCAAC dpoL 1325715 - 1327895 + | phage-related DNA polymerase PD1135 1327892 - 1328170 + | hypothetical protein PD1136 1328167 - 1328706 + | hypothetical protein PD1137 1328703 - 1330121 + | hypothetical protein TERM 874 1330314 - 1330324 + G 74 -6.8 -4.31166 | CTACGAGACATGCCC CCAG CCG CTGG TTTATGTCTTTCTAG PD1138 1330275 - 1330532 + | hypothetical protein int 1330522 - 1331541 + | phage-related integrase PD1140 1331905 - 1334496 + | hypothetical protein TERM 875 1334585 - 1334598 + T 76 -2.3 -5.28176 | opp_overlap 1334578 1334585 CAAACAATGAAAAAA GAGCA TTTA TGCGC TTTTTTGTGAATCAC TERM 876 1334598 - 1334585 - T 76 -2.3 -5.4148 | opp_overlap 1334585, overlap 1334578 CAAACAATGAAAAAA GAGCA TTTA TGCGC TTTTTTGTGAATCAC PD1141 1338026 - 1334850 - | ankyrin-like protein TERM 877 1335536 - 1335507 - G 87 -13.5 -3.28924 | opp_overlap 1335507 1335508 TACCGCTGCCGACAA CGGCGTGGCGCCA TTGT TGGCGGCACGCTG TAAATCGGCCCCACG TERM 878 1336948 - 1336934 - G 71 -4.2 -4.67982 | overlap 1336935 1336936 CCGCAGCCAACAAAA CCGGAG TGC CTCCAA TCGGCTCTGTCTGGG fabB 1338587 - 1339786 + | 3-oxoacyl-(acyl carrier protein) synthase I TERM 879 1340524 - 1340510 - g 100 -9.2 -5.07275 | GCATAGATACAAAAA CGGCGC TGT ACGCCG GCACAAATCAGCTGT PD1143 1339783 - 1340562 + | hypothetical protein PD1144 1340559 - 1341383 + | dolichyl-phosphate mannose synthase related protein PD1145 1342013 - 1341390 - | hypothetical protein TERM 880 1341870 - 1341850 - G 83 -7.5 -4.61199 | opp_overlap 1341850 1341852 AGGGGATAGAGAAAA GATACGGGC TGT GCACGCATC TTCCATAATGAAATG spsQ 1342901 - 1342017 - | glycosyl transferase pilT 1344072 - 1345106 + | twitching motility protein pilU 1345272 - 1346402 + | twitching motility protein PD1149 1348099 - 1347095 - | transcriptional regulator TERM 881 1348180 - 1348166 - H 80 -7.2 -4.62069 | overlap 1348177 TTCTCACTCCAAAAA GCTATT TTA AATAGC AATGATTTAACTGCT PD1150 1348247 - 1348615 + | hypothetical protein PD1151 1348870 - 1349721 + | hypothetical protein hemC 1350692 - 1349775 - | porphobilinogen deaminase algR 1351458 - 1350700 - | two-component system, regulatory protein algZ 1352524 - 1351484 - | two-component system, sensor protein TERM 882 1351678 - 1351662 - G 70 -6.5 -4.14392 | opp_overlap 1351662, overlap 1351663 ATACGGATATATAAA CGCTGCG CTT CGCAACA TATGCTTACCTCCAC TERM 883 1352115 - 1352103 - G 77 -4.1 -4.99035 | TCATTGACATAAAAA TAGTG GAG CACCA AAACTGTGATCAGTA estA 1353212 - 1352538 - | carboxylesterase mdoH 1355145 - 1353241 - | glucosyltransferase MdoH TERM 884 1357209 - 1357233 + G 71 -10.8 -3.21099 | AACTCGCCTATGCAC CACTCATCTG TTCCC CAGGTGAGTG TTACTCCTACCAAAA pbp 1356614 - 1357981 + | beta-lactamase-like protein PD1158 1359001 - 1358111 - | hypothetical protein PD1159 1360302 - 1361231 + | transcriptional regulator TERM 885 1362238 - 1362214 - T 100 -13.6 -3.73088 | ATACCTCACGAACAA GATGCCGCCA CTCAT CGGCGGCATC GTAGGCGGTCGTAGC TERM 886 1362365 - 1362377 + T 75 -2.7 -5.1101 | ATCAATATCCATTAT TCTTT GTC AGAGA TTTTTTGAATGCTAA PD1162 1365415 - 1364210 - | hypothetical protein TERM 887 1364967 - 1364955 - G 73 -5.5 -4.63527 | TCAGCATCCCAAAAA TGCCG TTC CAGCA AGCACCACGTTTCAT PD1163 1366428 - 1365412 - | fructokinase gluP 1367705 - 1366425 - | glucose/galactose transporter TERM 888 1368216 - 1368196 - R 74 -5.5 -4.63586 | opp_overlap 1368200, overlap 1368198 ACATGAGAGAGAAAA GACATCATT AAA AATGATGTA CTCCTGCCTACTTCT TERM 889 1368214 - 1368198 - R 74 -8.1 -3.92276 | opp_overlap 1368200, overlap 1368196 ATGAGAGAGAAAAGA CATCATT AAA AATGATG TACTCCTGCCTACTT PD1165 1369206 - 1368571 - | nucleoprotein/polynucleotide-associated enzyme PD1166 1369488 - 1369252 - | hypothetical protein ugd 1370833 - 1369481 - | UDP-glucose dehydrogenase PD1168 1371558 - 1370860 - | macrophage infectivity potentiator TERM 890 1370986 - 1370972 - G 76 -5.6 -4.7629 | GCAGGAATCCAAAAA CGGTAC TTA GAACCG ACAGGCATCAACGAC TERM 891 1371690 - 1371704 + r 82 -7.1 -4.74767 | TGACTTTCTCTTTTT CGGTG CTCAA CACCG TTTTCTCTTGATTAT btuE 1373052 - 1372474 - | glutathione peroxidase/vitamin B12 uptake permease PD1170 1373834 - 1374685 + | ABC transporter ATP-binding protein PD1171 1374682 - 1375659 + | hypothetical protein PD1172 1375918 - 1376364 + | hypothetical protein PD1173 1377712 - 1376468 - | phage-related tail fiber protein TERM 892 1376716 - 1376750 + g 70 -9.2 -3.67296 | GCACATGAAACCCTG CGGCCTGCATGCTGAT GTT ATGGGCATGCTTGCCG TTTGCATCGGTGGTG TERM 893 1376853 - 1376829 - G 78 -5.7 -4.82901 | overlap 1376830 TTTTGCTCATAAAAA CCCATGTCTCT TCC AGAGGCATAGA TCGCTCTGAAAGAAC TERM 894 1377133 - 1377101 - G 76 -11.9 -3.14881 | opp_overlap 1377108 GAAGGTGCCGACCAA GGCAGGGTCGGCGGT GTG AACGCCGACGGTGCC TTCAAGAAAATTGGG TERM 895 1377510 - 1377553 + g 70 -9.6 -3.3506 | gap 1, opp_overlap 1377514, overlap 1377511 TCCTGGTAGCCTTTA AGCACCGTGGTG-ATGGCGTG CAG CACGGCATTCATGACGGTGCG TTCTACGGGTTTAGC TERM 896 1377511 - 1377552 + g 75 -13.1 -2.60714 | gap 1, opp_overlap 1377514, overlap 1377510 CCTGGTAGCCTTTAA GCACCGTGGTG-ATGGCGTG CAG CACGGCATTCATGACGGTGC GTTCTACGGGTTTAG PD1174 1378276 - 1377716 - | hypothetical protein PD1175 1379418 - 1378273 - | hypothetical protein TERM 897 1378560 - 1378593 + g 74 -3.1 -4.94262 | opp_overlap 1378551 1378571, overlap 1378562 AACGGACCATCGTTG GACGGTCAAAATAGA TCTC TCTAGGTTGGCCGTG TTTGTTTTTAATCTG TERM 898 1378780 - 1378764 - G 75 -12.3 -2.90194 | AGTTTTCTAAGCAGA CGACGTG GCG CACGTCG GGTAGCCCCCAGAGC PD1176 1379511 - 1379813 + | hypothetical protein PD1177 1379817 - 1380122 + | hypothetical protein PD1178 1380486 - 1380133 - | hypothetical protein PD1179 1381124 - 1380483 - | hypothetical protein TERM 899 1381050 - 1381064 + g 72 -11.4 -3.10641 | opp_overlap 1381038 CAAGGCCACACGCAG GCGCTG GGC CAGCGC TTCGGTACTGCGTTG PD1180 1381951 - 1381121 - | hypothetical protein PD1181 1382265 - 1381948 - | hypothetical protein PD1182 1383035 - 1382265 - | hypothetical protein PD1183 1383077 - 1383373 + | anti-toxin protein PD1184 1383357 - 1383623 + | toxin-like protein PD1185 1385523 - 1383634 - | hypothetical protein TERM 900 1384120 - 1384090 - G 89 -13.2 -3.53224 | opp_overlap 1384092 GATGCTGTGGCTAAA GGCCAGCGCACAGG CGT CCTTGACGCTGGCC CAGGTGGTCTTGGCG TERM 901 1384322 - 1384312 - G 74 -4.6 -4.82901 | GGGGTTGGACAAAAA CGCG ACC CGCA ACGCCAGCGCGGCAA TERM 902 1385201 - 1385216 + g 80 -4.6 -5.00616 | overlap 1385203 CCGCGCCCCACTCCA TTGGCG GCTT CGCCTA TTTTTTGGGACAAGG TERM 903 1385203 - 1385214 + g 74 -7.2 -4.13561 | overlap 1385201 GCGCCCCACTCCATT GGCG GCTT CGCC TATTTTTTGGGACAA PD1186 1386093 - 1385671 - | hypothetical protein PD1187 1386527 - 1386090 - | hypothetical protein PD1188 1386770 - 1386537 - | truncated phage-related protein TERM 904 1386697 - 1386676 - G 74 -2.2 -5.03994 | overlap 1386691 GCCCAGACATAAAAA CCAGCG TCCAGGTAAT CGCCGG TGGCCAGCGCACCGA TERM 905 1387947 - 1387913 - H 88 -8.5 -4.81551 | gap 1, opp_overlap 1387934 1387936, overlap 1387914 CAGTTATAGGAAAAA CCGGCCACACCTGCCG CACG CGACAGGTG-GGTCGC CTGTACATTGTTAGG TERM 906 1387946 - 1387914 - H 86 -12 -3.48208 | gap 1, opp_overlap 1387934 1387936, overlap 1387913 AGTTATAGGAAAAAC CGGCCACACCTGCCG CACG CGACAGGTG-GGTCG CCTGTACATTGTTAG dpoL 1388329 - 1389201 + | truncated phage-related DNA polymerase PD1192 1389198 - 1389476 + | hypothetical protein PD1193 1389473 - 1389928 + | hypothetical protein PD1194 1389925 - 1391343 + | hypothetical protein TERM 907 1391536 - 1391546 + G 74 -6.8 -4.31166 | CTACGAGACATGCCC CCAG CCG CTGG TTTATGTCTTTCTAG PD1195 1391497 - 1391754 + | hypothetical protein int 1391744 - 1392763 + | phage-related integrase yheS 1394767 - 1392830 - | ABC transporter ATP-binding protein bfeA 1394929 - 1397310 + | ferric enterobactin receptor TERM 908 1397442 - 1397412 - T 90 -14.9 -3.22884 | gap 1, overlap 1397415 TCATCAACGCAGGAA GAATGCCGATTGCG ATGC CGCA-TCGGCATTC AACTGGGCCAGTGCA TERM 909 1397439 - 1397415 - T 83 -10.8 -3.75105 | gap 1, overlap 1397412 TCAACGCAGGAAGAA TGCCGATTGCG ATGC CGCA-TCGGCA TTCAACTGGGCCAGT frnE 1398068 - 1397400 - | polyketide synthase TERM 910 1398226 - 1398216 - H 74 -5.4 -4.64676 | GTAGGTGGAACAAAA GTCA TAC TGAC ATACACGCCATGTAT TERM 911 1400205 - 1400216 + G 75 -5.8 -4.62783 | TTCCGTGCACCCTCT CTGC AACA GCAG TTTTTCCAATCAATC TERM 912 1400490 - 1400480 - g 71 -8.2 -3.91084 | opp_overlap 1400486 TTACCTGCAAGCAAA CGGC TAC GCCG GCATCGGCGGCGGGC bfeA 1398693 - 1401059 + | ferric enterobactin receptor TERM 913 1401104 - 1401061 - f 100 -15.4 -3.62591 | gap 1, opp_overlap 1401053 1401064, overlap 1401053 1401065 GCTACAACTGGTAAA TCCA-GTTCCTGGGCCGATGC CTA ACGTCGGCCCAGGAACATTGA GTATGAGTTTGGAAT TERM 914 1401064 - 1401100 + F 100 -18.8 -3.15236 | opp_overlap 1401053 1401061 1401065, overlap 1401053 ACAACTGGTAAATCC AGTTCCTGGGCCGATG CCTAA CGTCGGCCCAGGAACA TTGAGTATGAGTTTG TERM 915 1401099 - 1401065 - f 100 -20.8 -2.65279 | opp_overlap 1401064 1401053, overlap 1401061 CAACTGGTAAATCCA GTTCCTGGGCCGATGC CTA ACGTCGGCCCAGGAAC ATTGAGTATGAGTTT TERM 916 1401583 - 1401597 + F 71 -7.1 -4.11216 | TTGTGAAGTTGTTCT GGCGA CAGAA TCGCC TTTTGCAGATACGCA ybaL 1402081 - 1403799 + | cation:proton antiporter phoX 1404174 - 1405268 + | ABC transporter phosphate binding protein TERM 917 1405534 - 1405568 + G 72 -2.6 -4.96848 | opp_overlap 1405548, overlap 1405536 TATCTATGCTGTGGG GAGGACGCCAAGCACT GCA ACTGCAAGGCGTCAGC TTTTTCTATAGCACG TERM 918 1405661 - 1405693 + G 81 -4.1 -5.14563 | gap 1, overlap 1405663 1405664 TGCACTGATTGCGAT GCTGATCGCCATGC CCGTGA GCTTGGGGATC-GC TTTTTTCCTCACCGA pstC 1405380 - 1406354 + | ABC transporter phosphate permease TERM 919 1406428 - 1406444 + G 72 -2.1 -4.85618 | overlap 1406429 CACGATCTCTTGTAT CGCCGCA CTG TTCGGCC TTTTCTTCCTTATTT TERM 920 1406784 - 1406801 + G 77 -7.7 -4.33105 | ACTTCTCCGCATTTT CTGGTGC CCTG GCACTAG TTTTCATCGTACTTC pstA 1406354 - 1407217 + | ABC transporter phosphate permease pstB 1407238 - 1408068 + | phosphate ABC transporter ATP-binding protein phoU 1408086 - 1408808 + | phosphate regulon transcriptional regulator rnt 1409027 - 1409662 + | ribonuclease T TERM 921 1409803 - 1409770 - f 79 -9.8 -3.77111 | gap 2 CAGTAAAAATCACAA TGC-CTA-CGTGGATG ATTC CATCCACGATAGCGCA GGAAATATGAAAAGC ksgA 1410144 - 1410941 + | dimethyladenosine transferase apaG 1410978 - 1411361 + | ApaG apaH 1411376 - 1412263 + | diadenosine tetraphosphatase TERM 922 1412251 - 1412239 - f 85 -3.3 -5.46698 | TCGAAAAGCAAAAAA GCGCC ACA AACGC TCCCCAAAGTAGTGG TERM 923 1412604 - 1412588 - f 73 -2.3 -5.2204 | opp_overlap 1412588 TAGAATCAACAAAAA TTGAATT TTA ATTTCAA TTTTCCATAAACTCC PD1211 1412807 - 1414081 + | hypothetical protein PD1213 1415090 - 1414311 - | 3-deoxy-D-manno-octulosonic-acid kinase opsX 1415082 - 1416134 + | saccharide biosynthesis regulatory protein PD1214 1416559 - 1416152 - | hypothetical protein PD1216 1417444 - 1418136 + | protein phosphatase dnaQ 1418933 - 1418214 - | DNA polymerase III subunit epsilon rnhA 1419382 - 1418930 - | ribonuclease H PD1219 1420046 - 1419396 - | hypothetical protein TERM 924 1420038 - 1419982 - G 81 -8 -4.34223 | gap 1 AACTGAATTAACAAA CGCCCTGCCCCCGTTTCGAACCAGG ATGAGAGA CCC-GTTTGACATGGAGGCAGAGCG GCAGGCATGGTCACA gloB 1420058 - 1420834 + | hydroxyacylglutathione hydrolase TERM 925 1420836 - 1420825 - f 79 -4.4 -5.24129 | opp_overlap 1420825 CTTCCCCATAAAAAA CATC CCCT GATG TGCTTGTGCTGCTTG TERM 926 1421128 - 1421107 - f 72 -6.5 -4.19799 | opp_overlap 1421110, overlap 1421104 1421110 AAGAAACAACAATAA CGACGATGG AGAT CCACCGTTG TGAATCTCTCCCATA PD1221 1421259 - 1421489 + | plasmid protein TERM 927 1421996 - 1421982 - f 84 -5 -5.31877 | ACTTATCATAAAAAA TGAACG ATG CATTCA ATCCAAAGGAAACGA TERM 928 1422141 - 1422126 - f 70 -2.5 -4.99638 | AGATTCATATAAAAA GCGCA TCTCAG TGCAC CCACATGCTTTATAT PD1222 1422335 - 1422562 + | hypothetical protein TERM 929 1424471 - 1424452 - g 70 -9.4 -3.75229 | CAAACCACAGGCAAA CCAATCAA AGCA TTGATTGG CGATAGCCACACCTT TERM 930 1424591 - 1424569 - g 76 -3.2 -5.05301 | overlap 1424570 1424572 AAAGAACTAGAAAAA CCAGGCCGCG ACC CACGTCCAGA ATTCAAAGCTGTGCG tex 1422685 - 1425003 + | transcription-related protein PD1224 1425819 - 1427915 + | hypothetical protein PD1225 1428006 - 1428620 + | hypothetical protein TERM 931 1429136 - 1429118 - g 74 -3 -4.84363 | GGAAATGATGAAAAA TTGCTGGC AGT GCCCGTAA GCAAAATCTTCTCCG ppa 1428803 - 1429339 + | inorganic pyrophosphatase TERM 932 1429458 - 1429516 + F 71 -3.7 -4.74103 | gap 1, opp_overlap 1429458 1429459, overlap 1429449 1429459 1429460 GCGGCACCGTGATAA CG-GTGTATGGAGCCATCCCGAACCCAG CCTA CGGGATCCGGGATGAATCCATCCGCATG TTTTTCCCTTGCACC PD1227 1429759 - 1429977 + | hypothetical protein trx 1431095 - 1430070 - | thioredoxin domain-containing protein PD1228 1431080 - 1431685 + | hypothetical protein TERM 933 1433118 - 1433103 - g 72 -11.8 -2.75481 | TTCGAACGCCAAGGA CGCGGC CAGC GCCGCG TGAACTACCGCCTGC TERM 934 1433647 - 1433615 - g 82 -5.5 -5.08824 | overlap 1433616 CTTCTACCGAAAAAA TCCGGATGGTTCCAA AGA TTGGATCAATCCAGC CGATGTCAATGTGGA TERM 935 1433646 - 1433616 - g 70 -9 -3.64812 | overlap 1433615 TTCTACCGAAAAAAT CCGGATGGTTCCAA AGA TTGGATCAATCCAG CCGATGTCAATGTGG leuS 1431807 - 1434470 + | leucyl-tRNA synthetase PD1231 1434561 - 1435169 + | rare lipoprotein B precursor holA 1435180 - 1436211 + | DNA polymerase III subunit delta nadD 1436241 - 1436909 + | nicotinic acid mononucleotide adenylyltransferase PD1234 1436927 - 1437373 + | hypothetical protein mltB 1438725 - 1439849 + | membrane-bound lytic transglycosylase rlpA 1439846 - 1441099 + | rare lipoprotein A TERM 936 1441139 - 1441110 - T 86 -13.7 -3.15996 | overlap 1441108 TATGATCCATCAATA CTGGATTGGCATA TACA TATGCCGATCCAG CCATCCAAAGCACAC PD1237 1441843 - 1441223 - | hypothetical protein PD1238 1442363 - 1442587 + | hypothetical protein TERM 937 1443117 - 1443082 - T 72 -9.1 -3.52522 | gap 1, opp_overlap 1443104 TTACAGAAATACCAA CACAGATACCGC-CCC ATGAG GGGCACAGCATCTGTG GATTTAAATAAATCA PD1239 1443576 - 1443184 - | hypothetical protein PD1240 1443932 - 1443573 - | hypothetical protein PD1241 1444556 - 1444155 - | hypothetical protein PD1242 1445692 - 1444553 - | hypothetical protein TERM 938 1445643 - 1445659 + g 71 -10.1 -3.61398 | TTTTGCAGCATTTGG GTGGCCG GGC CGGTCAC TTGTTGGCCGGCGGC PD1243 1446398 - 1446006 - | hypothetical protein PD1244 1446631 - 1446395 - | hypothetical protein TERM 939 1446759 - 1446796 + r 70 -10.1 -2.96216 | opp_overlap 1446759 1446758 TGACGCTTATCAAAC GCATTTTATTTTAATGC AACT GCGTTTGAATAAAATGC TATGTGGTAGTCACA PD1245 1447312 - 1446899 - | hypothetical protein TERM 940 1447330 - 1447344 + H 75 -6.4 -4.38141 | TTTCGATTTACAATT TCCTTC AAA GAGGGA TTATTTTCTATAACA TERM 941 1448471 - 1448510 + H 100 -16.4 -3.67597 | gap 1 ATAATCCCGTGAGGA CGCTGGAGGCGGCGGCGCC TTG GGCGCCACTGC-TGCAGCG TTGTTGGCTGGCCGC TERM 942 1448733 - 1448753 + H 72 -8.1 -3.74693 | overlap 1448735 1448743 1448744 GATTTGGCGGTAGGT GCCGCCCGG TCC CCAGGCGTC TTTGATGGCCTGGGC TERM 943 1448735 - 1448751 + H 70 -9.3 -3.4582 | overlap 1448733 1448743 1448744 TTTGGCGGTAGGTGC CGCCCGG TCC CCAGGCG TCTTTGATGGCCTGG TERM 944 1449265 - 1449321 + H 79 -8.6 -4.28375 | gap 1 GTGCCGACGGTGCCG CCGTTGCGGCTGTAGCCGCCGCCCAGG TTGA CTTGGGTGGCGG-TGTAGGTGGCGCGG TTTTCAATGTCTTGC TERM 945 1449657 - 1449671 + H 76 -9.2 -3.72893 | overlap 1449660 AATGACGTGTTTGGC GGTGCC AAT GGCGCC TTTCATGAGGAGGTC TERM 946 1450200 - 1450220 + H 86 -14.7 -2.52602 | overlap 1450197 1450193 1450202 GGCGTGGAGGCGGGG GTCGCCGCT GCG AGCGGCGGC GTGTTGCATTTGCTG TERM 947 1450202 - 1450221 + H 81 -12.8 -3.21807 | overlap 1450200 1450197 1450193 CGTGGAGGCGGGGGT CGCCGCTG CGAG CGGCGGCG TGTTGCATTTGCTGG TERM 948 1452232 - 1452263 + H 80 -12.2 -3.02471 | TTGGGCGGCAATGTG TTGGTGGCCGCCGC TGGT GATGCGGCCGCCAA TCTGTGTGGTGGGGG TERM 949 1453806 - 1453828 + H 100 -15.6 -3.16191 | CTTGGGCGGTGAGGT CGGCGGCTTG GAG CAAGCCGCTG TTGGTCAGGGTGTCG TERM 950 1455201 - 1455217 + H 71 -10.1 -3.29325 | overlap 1455199 GGTGGGCGGGGCCGG CGGCATC CAG GGTGCCG TGTTGGTTGTGGAGG TERM 951 1456580 - 1456606 + H 70 -9.4 -3.39036 | gap 1 ATGGCGTCGATGGCA CCGCCGGCGGT GATGTG GCCGCCG-CGG TTGTCAATGGTCTGT PD1247 1458244 - 1458450 + | hypothetical protein TERM 952 1458566 - 1458580 + T 78 -5.8 -4.73613 | CGTCACGTCCATAGG TAATGA TCT TCATTA TTTTCTTCCTGCTCA PD1248 1458954 - 1458553 - | hypothetical protein PD1249 1459234 - 1458959 - | hypothetical protein PD1250 1459681 - 1459289 - | hypothetical protein prmA 1460231 - 1461151 + | ribosomal protein L11 methyltransferase PD1252 1461249 - 1461701 + | hypothetical protein efp 1461783 - 1462349 + | elongation factor P PD1254 1464035 - 1462647 - | oxidoreductase TERM 953 1464592 - 1464603 + G 74 -4.4 -4.71426 | TGGCTGAGCTGATCA TTGC GGAA GCAA TTTTGTTGCTACGCA serA 1464237 - 1465478 + | D-3-phosphoglycerate dehydrogenase TERM 954 1466332 - 1466348 + G 74 -7.9 -4.09649 | CATTGAAGGGGTGAT CCGCGGT GCA GCCGTGG TGTTTTTCTCCTATA potE 1465610 - 1467061 + | cationic amino acid transporter TERM 955 1467104 - 1467072 - f 70 -9.7 -2.98947 | opp_overlap 1467077, overlap 1467069 1467066 GCTAAGCAATAAGCA CTCAGGAGGCCGGCG CAA CGCCGGCCTCTTTTA CTAATTACACTTTTT TERM 956 1467077 - 1467099 + F 100 -20.6 -4.3534 | opp_overlap 1467072 1467069 1467066 GCAATAAGCACTCAG GAGGCCGGCG CAA CGCCGGCCTC TTTTACTAATTACAC potE 1467139 - 1468572 + | cationic amino acid transporter fucA2 1468577 - 1469233 + | hypothetical protein TERM 957 1469669 - 1469659 - g 73 -5.4 -4.59853 | CGAATGCGTTAAAAA CGAT CTG ATCG CAATACCCGATGGCA PD1259 1469270 - 1469836 + | methionine salvage pathway enzyme masA 1469839 - 1470537 + | enolase-phosphatase hisI 1471537 - 1470917 - | bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein hisF 1472303 - 1471530 - | imidazole glycerol phosphate synthase subunit HisF hisA 1473225 - 1472416 - | 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase hisH 1473824 - 1473222 - | imidazole glycerol phosphate synthase subunit HisH hisB 1474948 - 1473821 - | imidazole glycerol-phosphate dehydratase/histidinol phosphatase TERM 958 1474849 - 1474808 - G 80 -9.5 -3.99324 | gap 1 GGTGACGATCACAAA GTGATAGCCGGCATCACGGA GCT TCAGCAATGCCGGG-ATCAC GCCGTTGACAAGGCG hisC 1476042 - 1474945 - | histidinol-phosphate aminotransferase hisD 1477334 - 1476039 - | histidinol dehydrogenase TERM 959 1476634 - 1476662 + g 75 -11 -3.31248 | gap 1, overlap 1476659 ACCTCCGAGGGGCCT GCCGGCAT-GTCG ATTG CGACGACGCCGGC TTGTGCAAGCTGTTG hisG 1478245 - 1477331 - | ATP phosphoribosyltransferase PD1269 1478580 - 1478242 - | hypothetical protein hisS 1480526 - 1479126 - | histidyl-tRNA synthetase TERM 960 1479984 - 1479999 + g 76 -9 -3.96483 | GCTCTCAAGGAAGCC CCGCAA TACT TTGCGG TTGTTTAACTGGACT TERM 961 1480606 - 1480556 - R 80 -6.7 -4.74917 | gap 1, overlap 1480560 AGTAAACAGATAAAA GCAGGGCGCCATTCTACCGGCTGC AATC GCTTCCGGTGGCATGGCATC-TGC GGGAAAACTCGAAAT thrC 1482134 - 1480842 - | threonine synthase thrB 1483152 - 1482184 - | homoserine kinase TERM 962 1482273 - 1482242 - G 90 -10.2 -4.25104 | gap 1, overlap 1482257 GCTTGGCTATCAAAA CCAGCCGCG-GTG AAAGCAG CACGCACGGCTGG TGCGGCGGCTTCGGC lysC 1485635 - 1483149 - | bifunctional aspartokinase I/homeserine dehydrogenase I TERM 963 1483212 - 1483199 - G 87 -8.1 -4.64657 | GTAAATCCGCAAAAA CACCG GCTG CGGTG ACCTCTGGACCGGCG pyrB 1487112 - 1486150 - | aspartate carbamoyltransferase catalytic subunit PD1275 1487584 - 1487117 - | Holliday junction resolvase-like protein algH 1488143 - 1487577 - | hypothetical protein TERM 964 1488561 - 1488523 - R 79 -10.5 -3.58428 | gap 1 GCCAAATACAATGAA CCTGTCACACACACCA TAAGCCGC TGATG-GTGTGACAGG GAAAAGCGATGACAT dacC 1489815 - 1488625 - | penicillin-binding protein 6 precursor TERM 965 1490188 - 1490170 - R 80 -6.6 -4.81306 | overlap 1490171 TGTAAGAAAAAAGAA GCGCTGCC AGC AGCAGCGA CCATGCTGCAAAACC TERM 966 1490187 - 1490171 - R 73 -10.1 -3.47157 | overlap 1490170 GTAAGAAAAAAGAAG CGCTGCC AGC AGCAGCG ACCATGCTGCAAAAC cpeB 1492658 - 1490427 - | catalase/peroxidase dnaJ 1494085 - 1493204 - | DnaJ protein TERM 967 1494136 - 1494113 - R 90 -9.5 -4.53034 | overlap 1494132 CTTACACAAGGAAAA GCCCGCAGC ATCAAA GCCACGGGC CAGCCGAATCTGGCC hspA 1494712 - 1494230 - | low molecular weight heat shock protein pbpC 1497379 - 1494989 - | bifunctional penicillin-binding protein 1C precursor PD1282 1497840 - 1497559 - | hypothetical protein TERM 968 1500375 - 1500365 - g 76 -5.4 -4.73614 | overlap 1500368 1500370 CAGCATCAAAATAAA GGAT ACG ATCC GCACGATCGGTGCAT PD1283 1498206 - 1501082 + | TonB-dependent receptor TERM 969 1501142 - 1501114 - f 72 -8.8 -3.524 | gap 1, opp_overlap 1501118, overlap 1501115 1501118 TACGCATTGATACAA GC-GACGGCGGGG GCAA CCCCGCCGTTTAC ATTCAGGCGATTCGT TERM 970 1501140 - 1501115 - f 71 -10.3 -2.71119 | opp_overlap 1501118, overlap 1501114 1501118 ACGCATTGATACAAG CGACGGCGGGG GCAA CCCCGCCGTTT ACATTCAGGCGATTC TERM 971 1501137 - 1501118 - f 95 -16.4 -2.63555 | opp_overlap 1501118, overlap 1501115 1501114 CATTGATACAAGCGA CGGCGGGG GCAA CCCCGCCG TTTACATTCAGGCGA TERM 972 1501118 - 1501137 + F 100 -16.4 -3.75153 | opp_overlap 1501115 1501114 1501118 CATTGATACAAGCGA CGGCGGGG GCAA CCCCGCCG TTTACATTCAGGCGA algU 1502037 - 1502657 + | RNA polymerase sigma factor RpoE TERM 973 1502939 - 1502924 - g 76 -10.4 -3.76224 | opp_overlap 1502933, overlap 1502927 CCTGTACGCACTAAA CACCGC TGGC GCGGTG GGACCGCGTTAATCG TERM 974 1502933 - 1502947 + G 74 -11.4 -3.1706 | opp_overlap 1502924 1502927 ACTAAACACCGCTGG CGCGGT GGG ACCGCG TTAATCGCCTCCGTT PD1285 1502654 - 1503379 + | hypothetical protein TERM 975 1503768 - 1503714 - g 70 -6.5 -4.1711 | gap 1, opp_overlap 1503714 1503725 ATTACCCGTAAGAAA GTCGGCAAACGTCGCGGTATACCGCT TGAC AACGATATACC-CGAGTTTTTCCGGC GTTTCTTTGGCCCAG mucD 1503477 - 1505021 + | periplasmic protease TERM 976 1506363 - 1506350 - g 70 -3.1 -4.7078 | gap 1 TGAAGTACTTAAAAA CGACGG CAC CC-TCG TTGCAATGGACAACC TERM 977 1506923 - 1506909 - g 100 -5 -5.45652 | AGTCGTAAGAAAAAA CTGCTT GAG AAACAG AAAGAAGGCAAAAAA lepA 1505205 - 1507013 + | GTP-binding protein LepA lepB 1507114 - 1507914 + | signal peptidase I PD1289 1507911 - 1508324 + | hypothetical protein rnc 1508311 - 1508994 + | ribonuclease III era 1508991 - 1509887 + | GTP-binding protein Era TERM 978 1509886 - 1509871 - f 73 -4 -4.7871 | overlap 1509873 AAGCAGCACTAAAAA CATTCG GCTA CGAATA ACCCCATCGCAACAA recO 1510093 - 1510824 + | DNA repair protein RecO dxs 1512891 - 1510984 - | 1-deoxy-D-xylulose-5-phosphate synthase TERM 979 1513269 - 1513254 - R 74 -5.4 -4.65895 | GTGTTCATTGAAAAA TGCTGC TTGT ACAGCA ATACAGCAATACAGC actP 1515305 - 1513581 - | acetate permease TERM 980 1515196 - 1515176 - G 75 -3.9 -4.94902 | overlap 1515178 1515186 TAATCAGCACAAAAA CAGCGAACA TGG TGATCGCCA CCCAATTTACCGGCT TERM 981 1515194 - 1515178 - G 70 -6.5 -4.08644 | overlap 1515176 1515186 ATCAGCACAAAAACA GCGAACA TGG TGATCGC CACCCAATTTACCGG TERM 982 1515316 - 1515287 - G 78 -5.7 -4.79657 | ACAACACCAACAAAA GATGCCTGCCTAT GTTC ATTTACAGGCATC CTCAAGAATGTTACG PD1295 1515622 - 1515302 - | hypothetical protein TERM 983 1516471 - 1516486 + G 77 -8.2 -4.07885 | overlap 1516452 1516448 TTGGAGCAATCCACT CCGTCG TCTT CGGCGG TTTTGCAGCAAACTC TERM 984 1516636 - 1516615 - g 74 -4.4 -4.7254 | ATGCCGCATTAAAAA TCCACGGA ACCCAG TCCGTCGA AACCGTACTCGTCGT acs 1515996 - 1517939 + | acetyl-CoA synthetase PD1297 1518436 - 1519128 + | hypothetical protein PD1298 1519585 - 1519977 + | hypothetical protein PD1299 1520715 - 1522340 + | hypothetical protein TERM 985 1522445 - 1522400 - T 100 -14.9 -3.78953 | gap 1 AGGCGCAGCAGTAAA GTCCGC-ACTTGTGAGGCAGAG ACA CCCTGCCTCACAAACCGCAAAC CTGCTTTCAGAGGAG PD1300 1524771 - 1522705 - | alanyl dipeptidyl peptidase TERM 986 1524541 - 1524497 - G 83 -7.2 -4.63527 | overlap 1524531 1524534 CCATCACGGGAAAAA GCCGGTGCA-CTCACATCCCAT CCC AAGGGA-GTAAGACGCACTGGC GCAGCCGGTGCACCT TERM 987 1524716 - 1524704 - G 90 -10.5 -4.34402 | TCGCGCACATCAAAA CCGCG GGC CGCGG CAAGTACGGGCAAAA PD1301 1527093 - 1525132 - | oligopeptide transporter TERM 988 1528432 - 1528416 - g 74 -11.5 -3.28712 | opp_overlap 1528415 1528414, overlap 1528417 CCCGCTGCGTGAGAA CGCGCCG TGA CGGCGCA CATTGGTTGACTGAA TERM 989 1528431 - 1528417 - g 75 -12.8 -2.57132 | opp_overlap 1528415 1528414, overlap 1528416 CCGCTGCGTGAGAAC GCGCCG TGA CGGCGC ACATTGGTTGACTGA glpD 1527875 - 1529398 + | glycerol-3-phosphate dehydrogenase TERM 990 1529794 - 1529773 - g 74 -2.2 -5.00616 | overlap 1529777 TTCCCTTGGAAAAAA GTATTGCC GTACTG GGCAGCAC AAGTCATCGGCGCCT TERM 991 1529887 - 1529910 + G 70 -3 -4.74103 | opp_overlap 1529882, overlap 1529889 CACCAACTCACCCGA GACGCTGGCG GGGC TGCTGGCGTG TTTTTCACTTCCACA glpF 1529515 - 1530342 + | glycerol uptake facilitator protein TERM 992 1531426 - 1531388 - g 75 -11.1 -3.36878 | opp_overlap 1531387 1531391 1531415, overlap 1531373 GCCAGCGATTCACAA GCCTACGCCGACCG-TGTC AGC GACAACGG-CGGCGTATAC GTTGTACCGGCCTTC TERM 993 1531391 - 1531423 + G 78 -13.6 -2.59431 | opp_overlap 1531388, overlap 1531387 1531415 AGCGATTCACAAGCC TACGCCGACCG-TGTC AGC GACAACGG-CGGCGTA TACGTTGTACCGGCC glpK 1530398 - 1531897 + | glycerol kinase TERM 994 1532010 - 1531985 - T 86 -11.8 -3.61239 | CACAGCGACATACAA CGCCCGAGCC ACACCA GGCCCGGACG ATCACATCACCGCAA PD1305 1532884 - 1532117 - | 3-alpha-hydroxysteroid dehydrogenase PD1306 1533190 - 1534056 + | hypothetical protein TERM 995 1534340 - 1534306 - g 77 -3.5 -5.04868 | gap 1, overlap 1534308 1534309 TGAAATTAAATAAAA GAC-CGGCGAAGGATG CTTG CATCCCATGCCGAATC TGCGCCGCAACGGTG TERM 996 1534425 - 1534442 + G 80 -9.1 -4.19817 | GCGGACAGTAGGCTT GCCGTGT ACTC GCACGGC TTTTCCATCCATCCG PD1307 1534257 - 1534661 + | hypothetical protein TERM 997 1534759 - 1534746 - g 71 -8.1 -3.85817 | overlap 1534750 AGCGCGCCCTAGAAA GCCAC TGGC GTGGC GAGACCGATGCCACA TERM 998 1535626 - 1535584 - g 73 -10.6 -3.31461 | opp_overlap 1535582 1535578 1535577 TACCGATCTGGATAA CGCACTGACGATGGCAC-GC TACGC GCAGGGCCA-CGTCGGTGCG GATCGGTTATGGCTA metE 1534676 - 1536952 + | 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase TERM 999 1537000 - 1536975 - f 76 -11.8 -2.69471 | overlap 1536974 CCATCCGTATACAAT CGCTGGGGCG TTCAAC CGCCCCAGCT CGTACTGGAGCACCC PD1309 1537019 - 1537729 + | hypothetical protein pncA 1537751 - 1538389 + | pyrazinamidase/nicotinamidase TERM 1000 1538487 - 1538467 - T 70 -9.7 -3.1165 | overlap 1538464 TACTGAAAACAATCA GCAGCGCAA CCG TTGTGCTGC CCAAACCGCCAAGCG PD1311 1540110 - 1538464 - | peptide synthase TERM 1001 1539967 - 1539942 - G 71 -11.2 -2.88033 | opp_overlap 1539942 1539944, overlap 1539917 1539941 1539944 CATAAGCGATGAAAC CAGCCGCAAT CGCATC ACTGCGGCTG TCTAATTCACGGTAG PD1312 1540733 - 1540404 - | hypothetical protein TERM 1002 1540617 - 1540605 - G 72 -4.1 -4.74103 | CTTGGAAGCTAAAAA TTGGA CTA CCCAA CGTCCACCGAACAGC dpm1 1541452 - 1540730 - | dolichol-phosphate mannosyltransferase wbnF 1542462 - 1541491 - | nucleotide sugar epimerase TERM 1003 1541602 - 1541584 - G 80 -10.3 -3.84451 | TGGTTCAAATCCAAA TGCAGCG CGTGC CGCTGCA ATATCAGCCATTGTG PD1315 1543701 - 1542769 - | chromosome partitioning protein parA 1544495 - 1543701 - | chromosome partitioning protein PD1317 1545747 - 1544794 - | hypothetical protein serS 1547828 - 1546548 - | seryl-tRNA synthetase TERM 1004 1548112 - 1548080 - g 71 -12 -2.55213 | overlap 1548064 1548067 GACGCAGGCAAGGCA CTGCCACCGATACT CGGGT AGCACCGGTGGCCG AAAGTACGCAGACGC TERM 1005 1548429 - 1548395 - g 91 -10.1 -4.57569 | gap 1 CTATCCCTGGAAAAA TGCCACCACCT-GACT ATCC AGTCGAAGCGGCGGCA CGTGGCGATCACGGT tonB 1547950 - 1548645 + | TonB protein PD1321 1550448 - 1550281 - | hypothetical protein TERM 1006 1551004 - 1551034 + Gr 72 -8.8 -3.53012 | opp_overlap 1550998 GCAATTCAACGGGGC CAGTCGCACCGGAC GGT GGGCGGGGCGGCTG TTTCAGCCGCACAAC TERM 1007 1551151 - 1551171 + Gr 79 -12.5 -2.90075 | overlap 1551153 TGTCATGGCGCTGAC CAGCAGCGC GCT GCGCAGCTG TCTGATTGCACCAAC lycV 1552013 - 1551393 - | phage-related lysozyme dpoL 1550516 - 1551649 + | phage-related DNA polymerase TERM 1008 1552003 - 1551990 - GT 82 -5.2 -5.1101 | CCAGTACGCAAAAAA CCGC TCGAAG GCGG TATGAGCCAAAAAAA TERM 1009 1552037 - 1552020 - TR 100 -6.9 -5.82316 | overlap 1552021 ATGAGCCAAAAAAAA TCCCGCT AAAC AGCGGGG ATTAGAACGCGCTTC TERM 1010 1552036 - 1552021 - TR 87 -10.4 -4.07763 | overlap 1552020 TGAGCCAAAAAAAAT CCCGCT AAAC AGCGGG GATTAGAACGCGCTT PD1324 1552797 - 1552066 - | site-specific DNA-methyltransferase TERM 1011 1552310 - 1552299 - G 86 -7.2 -4.72272 | opp_overlap 1552299, overlap 1552300 TGCCGGTAGCAAAAA CGCC TACC GGCG TGACCGGATGCGCTT TERM 1012 1552585 - 1552571 - G 76 -2.7 -5.06451 | GACCACGCTAAAAAA CCTCG GTGGT CGCGG AAGTCGCAATCAAAA TERM 1013 1552988 - 1553001 + H 87 -9.5 -4.33767 | opp_overlap 1552988 ACGGACAGAAAAAAA CCGCC TTTA GGCGG TTTTCATGGCTTTAT TERM 1014 1553001 - 1552988 - H 100 -9.5 -5.72616 | opp_overlap 1552988 ACGGACAGAAAAAAA CCGCC TTTA GGCGG TTTTCATGGCTTTAT TERM 1015 1553060 - 1553029 - H 72 -5 -4.66609 | TATCTGAGTTAAAAA GCCCCGCGCTGC GTTAAGGG GCAGAAGGGGGC AATGCATCCATGCGT uvrC 1553486 - 1555351 + | excinuclease ABC subunit C pgsA 1555348 - 1555977 + | CDP-diacylglycerol-glycerol-3- phosphate 3-phosphatidyltransferase PD1328 1556188 - 1555994 - | hypothetical protein TERM 1016 1556477 - 1556461 - R 79 -8.7 -4.30809 | overlap 1556462 CAATATTCATCAAAA CGATGGC TAA GCCATCA GCCAGAAACTAAGCT TERM 1017 1556476 - 1556462 - R 71 -10 -3.17762 | overlap 1556461 AATATTCATCAAAAC GATGGC TAA GCCATC AGCCAGAAACTAAGC PD1329 1557186 - 1556728 - | hypothetical protein PD1330 1557892 - 1557395 - | hypothetical protein TERM 1018 1557871 - 1557861 - G 70 -5.4 -4.44046 | GCGAGGGCAAAGAAA GTGA CGA TCAC AAAACGCAAAGACAT hemB 1558497 - 1559501 + | delta-aminolevulinic acid dehydratase TERM 1019 1559723 - 1559697 - T 86 -11.6 -3.53125 | overlap 1559693 ACACATAAATAGCAA CGTGCTGTACTA CAG TAGCTCAGCACG GCACGCAACGTTAGC TERM 1020 1559945 - 1559993 + T 79 -11.8 -3.14132 | opp_overlap 1559945 ACACATGTTCAATAA GGCCGCCTCGGGTAACAT ACTTCTTTTTGCG ATGCTACCCGACGCGGCC TTAATGCGACAGAAC TERM 1021 1559993 - 1559945 - T 93 -14 -3.64755 | gap 1, opp_overlap 1559945 ACACATGTTCAATAA GGCCGCCTCGGGTAACAT-AC TTCTTTTT GCGATGCTACCCGACGCGGCC TTAATGCGACAGAAC PD1332 1560448 - 1560065 - | hypothetical protein TERM 1022 1560169 - 1560185 + g 100 -5.1 -5.60993 | GGGATACCGGACCAT CGACAAT CAC AATGTCG TTTTTTTCTAAAACC TERM 1023 1560509 - 1560489 - RH 72 -8.3 -3.83205 | opp_overlap 1560484 1560483 ACTTGCTACACTAAA TGGCGAACA GTA TTTTCGCCA GTTAGCTTCTAATCT PD1334 1560931 - 1560599 - | hypothetical protein tnp 1560919 - 1561485 + | IS1327 transposase TERM 1024 1562968 - 1562986 + G 76 -3 -5.02074 | overlap 1562970 1562971 CCGCTTCTTCCACGC GATGCTGC AAC GCGGCGTG TTTTTTGCCCCATCA hemL 1561811 - 1563145 + | glutamate-1-semialdehyde aminotransferase mrp 1564095 - 1563241 - | polysaccharide export protein kdsB 1564587 - 1565360 + | 3-deoxy-manno-octulosonate cytidylyltransferase PD1338 1565357 - 1565821 + | low molecular weight phosphotyrosine protein phosphatase dpnA 1566521 - 1565808 - | DNA methylase TERM 1025 1566034 - 1566023 - G 100 -7.2 -5.24129 | opp_overlap 1566023, overlap 1566024 TGCCGGTAGAAAAAA CGCC TACC GGCG TGACCGGATGCGCTT TERM 1026 1566309 - 1566295 - G 76 -2.7 -5.06451 | GACCACGCTAAAAAA CCTCG GTGGT CGCGG AAGTCGCAATCAAAA TERM 1027 1566725 - 1566712 - H 100 -9.5 -5.72616 | opp_overlap 1566712 1566710 ACGGACACAAAAAAA CCGCC TTTA GGCGG TCTGTGATTTTAAAT TERM 1028 1566712 - 1566725 + H 70 -9.5 -3.10935 | opp_overlap 1566712, overlap 1566710 ACGGACACAAAAAAA CCGCC TTTA GGCGG TCTGTGATTTTAAAT higA 1566872 - 1567153 + | proteic killer suppression protein vapI 1567163 - 1567462 + | virulence-associated protein hicB 1568004 - 1567642 - | HicB-related protein hicA 1568228 - 1567974 - | HicA-related protein PD1344 1568979 - 1568281 - | hypothetical protein PD1345 1569569 - 1569108 - | hypothetical protein TERM 1029 1569589 - 1569632 + r 83 -9 -4.25104 | gap 1, opp_overlap 1569589 CCCCCGATTCAATCA GCTCATGCGCCTGATTCCG GCTGATG TGGAATTCGGC-CATGAGC TTTTCCTCACGGGCG PD1346 1570255 - 1569566 - | hypothetical protein PD1347 1571351 - 1570236 - | hypothetical protein PD1349 1571830 - 1571348 - | hypothetical protein trbL 1571646 - 1572125 + | conjugal transfer protein trbN 1572131 - 1572736 + | conjugal transfer protein PD1351 1573338 - 1573721 + | hypothetical protein PD1352 1573723 - 1574400 + | hypothetical protein TERM 1030 1574427 - 1574442 + T 93 -6.1 -5.63517 | CATTCACTAAATCTG GCTGC CTTCGT GCAGC TTTTTTCTTTACGGG PD1353 1575241 - 1574975 - | hypothetical protein PD1354 1575749 - 1575477 - | hypothetical protein PD1355 1576475 - 1576257 - | hypothetical protein aroA 1578299 - 1576935 - | 3-phosphoshikimate 1-carboxyvinyltransferase TERM 1031 1577024 - 1577008 - G 70 -6.5 -4.17762 | opp_overlap 1577007 1577005 TAGTCTGGAAAAGAA GTCGCAA CAT TGGCGAC ATCTTCAATACGTAC TERM 1032 1577102 - 1577073 - G 93 -12.2 -4.27316 | opp_overlap 1577073 1577074, overlap 1577074 CCCTGCAATTGAAAA CGCCATGGCGAT GCGATG ATCGCCATGGCT GTTGATGGTGCCATG TERM 1033 1577073 - 1577103 + g 78 -12 -3.21747 | gap 1, opp_overlap 1577073 1577074, overlap 1577074 CCCTGCAATTGAAAA C-GCCATGGCGAT GCGATG ATCGCCATGGCTG TTGATGGTGCCATGA TERM 1034 1577074 - 1577101 + g 100 -15.7 -3.17229 | opp_overlap 1577073 1577074, overlap 1577073 CCTGCAATTGAAAAC GCCATGGCGAT GCGATG ATCGCCATGGC TGTTGATGGTGCCAT TERM 1035 1577101 - 1577074 - G 100 -15.7 -3.16068 | opp_overlap 1577074 1577073, overlap 1577073 CCTGCAATTGAAAAC GCCATGGCGAT GCGATG ATCGCCATGGC TGTTGATGGTGCCAT TERM 1036 1578315 - 1578301 - R 74 -7 -4.29304 | CGACGACAATACAAA CCGCCG AGG CTGCGG TAATGCGTGTCGCTC pheA 1579476 - 1578352 - | P-protein TERM 1037 1578989 - 1578974 - G 77 -4.7 -4.91473 | opp_overlap 1578974 GAATTCAAAAACAAA TCCAG CGTAAC CTGGA TTGTTCCATGACCTG serC 1580644 - 1579556 - | phosphoserine aminotransferase tonB 1581219 - 1582421 + | TonB protein natB 1583632 - 1582448 - | ABC transporter sodium permease natA 1584375 - 1583629 - | sodium ABC transporter ATP-binding protein slpD 1585946 - 1584372 - | proteinase folA 1586606 - 1586106 - | dihydrofolate reductase type III thyA 1587509 - 1586715 - | thymidylate synthase TERM 1038 1587020 - 1587002 - G 84 -6 -5.08601 | opp_overlap 1587019, overlap 1587004 GGACGCCAAGAAAAA TATCAGCG CTA CGTTGATA GAGCTGACAGCTCAA lgt 1588411 - 1587506 - | prolipoprotein diacylglyceryl transferase TERM 1039 1588023 - 1588002 - G 71 -5.7 -4.28361 | CCAAGCCGACCAAAA CCCAAGCCC ACTG GGACCAGGG GTGCGCAAAAATCAA dgkA 1588878 - 1588498 - | diacylglycerol kinase TERM 1040 1588924 - 1588901 - R 79 -2.4 -5.55698 | overlap 1588902 1588914 CAGAAGTTAAAAAAA CTGGAACG CGAAAGAT CGTCCCAA TCACGCCGTTGAAGG TERM 1041 1589043 - 1589030 - R 72 -5.3 -4.61482 | opp_overlap 1589030 1589034, overlap 1589031 1589033 1589034 CCTGTCAAAAAAGAA GCATT GCAC AATGC ATTGTCCAACACCTT colR 1589886 - 1589173 - | two-component system, regulatory protein tyrA 1591487 - 1590366 - | prephenate dehydrogenase dnaJ 1592662 - 1591556 - | DnaJ protein TERM 1042 1592776 - 1592740 - R 87 -10.2 -4.14511 | gap 1, overlap 1592727 1592728 1592741 AATGTCACGGTAAAA CCGCGAA-GGGCAAAGC GTTT GCTCCGCCCATTCGCAA ATCCATACCACTTCG TERM 1043 1592775 - 1592741 - R 75 -11.5 -3.08224 | gap 1, overlap 1592727 1592728 1592740 ATGTCACGGTAAAAC CGCGAA-GGGCAAAGC GTTT GCTCCGCCCATTCGCA AATCCATACCACTTC dnaK 1594719 - 1592803 - | molecular chaperone DnaK TERM 1044 1594767 - 1594751 - R 70 -10.1 -2.94032 | opp_overlap 1594751 1594746, overlap 1594750 AGTTTTGAATCAAAT TCCCAGC GGT GCCGGGA TCTGTTTCGAATGTG grpE 1595455 - 1594853 - | heat shock protein GrpE hrcA 1596543 - 1595494 - | heat-inducible transcription repressor TERM 1045 1598109 - 1598089 - g 73 -5.3 -4.56775 | overlap 1598090 1598092 ATCGTCGGCCAAAAA CTACGCGCC TTA GGCGAGCAA CACCAAGTATTATGC recN 1596661 - 1598334 + | recombination protein N fur 1598886 - 1598476 - | ferric uptake regulator smpA 1598955 - 1599392 + | outer membrane protein PD1376 1599663 - 1599421 - | hypothetical protein PD1377 1600105 - 1599665 - | hypothetical protein smpB 1600169 - 1600672 + | SsrA-binding protein TERM 1046 1600845 - 1600827 - T 100 -13.2 -5.75822 | CACAAACCAAAAAAA GAGCCACA TTA TGTGGCTC TAAAATTAAGTATTA PD1379 1603068 - 1600873 - | hypothetical protein TERM 1047 1601532 - 1601510 - G 73 -9.1 -3.90744 | overlap 1601524 TTGTTCTTGAAATAA CTGTCCTGC AATGA GCGGGACAG TGAACGGTCCAGCGA TERM 1048 1603394 - 1603382 - R 82 -5.5 -5.13354 | CCCATAAAAAACAAA CAGCC ATT GGCTA GAGACTGCATACAGG TERM 1049 1603882 - 1603857 - R 100 -9.7 -5.13741 | gap 1, overlap 1603858 GCAACCCAATAAAAA TGCGACGC-CCA TTG TGGAGCGTCGCC AAAATCGCTAATCGT TERM 1050 1603881 - 1603858 - R 95 -13.2 -3.6716 | gap 1, overlap 1603857 CAACCCAATAAAAAT GCGACGC-CCA TTG TGGAGCGTCGC CAAAATCGCTAATCG PD1380 1604179 - 1603976 - | cold shock protein deoD 1605015 - 1604269 - | 5'-methylthioadenosine phosphorylase hpt 1605574 - 1605017 - | hypoxanthine-guanine phosphoribosyltransferase exoII 1606614 - 1605571 - | beta-hexosaminidase TERM 1051 1605921 - 1605908 - G 75 -3.8 -4.8543 | CAATGCGCAGAAAAA CCTG CCGGTT CAGG CGCGACATTTGGATA PD1384 1607268 - 1606771 - | hypothetical protein TERM 1052 1607307 - 1607291 - R 70 -2.2 -4.97402 | TAAAATTCAGAAAAA GTCAGA GCGAA TCAGAC CGTGCAACACTCTTC rumA 1608661 - 1607330 - | 23S rRNA 5-methyluridine methyltransferase TERM 1053 1608775 - 1608761 - H 75 -2.8 -5.26158 | CAAACAAAAAATAAA GAACAA CTG TTGTAC AAATAAATAAACAAG PD1386 1608858 - 1609571 + | response regulator TERM 1054 1609725 - 1609708 - T 73 -4.1 -4.76213 | AGAAATGTAACAAAA CAGGACA AAAA CATCCTG AAAATGCATACATCA gumM 1610548 - 1609775 - | GumM protein gumK 1611852 - 1610719 - | GumK protein gumJ 1613505 - 1611973 - | GumJ protein TERM 1055 1612689 - 1612659 - G 80 -9.6 -3.97368 | CTTGCAACTGAGAAA GCACCGGCAACGCC ACT GAACTTGCCGGCGC AATCACCTGATTCAA TERM 1056 1613235 - 1613245 + g 74 -8.2 -4.04752 | opp_overlap 1613234, overlap 1613234 TCCAGAATAGATTAT CGCG CTG CGCG TTTGTAATCTGCTTT PD1390 1613780 - 1613502 - | hypothetical protein gumH 1615023 - 1613881 - | GumH protein gumF 1616570 - 1615500 - | GumF protein gumE 1617862 - 1616588 - | GumE protein TERM 1057 1617177 - 1617158 - G 72 -2.2 -4.93968 | gap 1, overlap 1617160 AGCGACAATTAAAAA TA-CGATCA TTG CGATCGATA AAATCAACTCGGAGA TERM 1058 1617495 - 1617478 - G 81 -3.5 -5.28166 | CAAAAGTAATAAAAA TACTCAT GCCC ATGAATA GACGCAGCAAAGATC gumD 1619362 - 1617908 - | GumD protein gumC 1620977 - 1619574 - | GumC protein gumB 1621633 - 1620980 - | GumB protein TERM 1059 1621345 - 1621327 - G 76 -5.2 -4.82901 | CTTCTTGGATAAAAA CAGAAACC TGA GGATCCTG CAGATAGTCACTGCG leuB 1623417 - 1622344 - | 3-isopropylmalate dehydrogenase leuD 1624649 - 1624002 - | isopropylmalate isomerase small subunit leuC 1626284 - 1624860 - | isopropylmalate isomerase large subunit TERM 1060 1626237 - 1626217 - G 74 -11.1 -3.16608 | overlap 1626209 ATGTAAATGAGCGAA GACCCATCG TCG CGACGGGCC ACCTCATGAATGTCC TERM 1061 1626826 - 1626812 - H 74 -8.6 -3.99678 | opp_overlap 1626814, overlap 1626807 AGCTTGATAAGGAAA CAGGAA TAT TTCCTG TAATGAATGCAAAAA TERM 1062 1626944 - 1626915 - H 90 -7 -5.38951 | overlap 1626917 1626918 AATCGATATAAAAAA GATGCGGCAGTC CTCCAT GACCGCCGCGGC ATGCGGCGCGCAAAA TERM 1063 1626942 - 1626917 - H 79 -8.2 -4.31943 | overlap 1626915 1626918 TCGATATAAAAAAGA TGCGGCAGTC CTCCAT GACCGCCGCG GCATGCGGCGCGCAA TERM 1064 1626941 - 1626918 - H 79 -11.7 -3.18081 | overlap 1626917 1626915 CGATATAAAAAAGAT GCGGCAGTC CTCCAT GACCGCCGC GGCATGCGGCGCGCA PD1400 1627810 - 1628160 + | hypothetical protein TERM 1065 1628242 - 1628262 + T 83 -9.7 -4.03234 | opp_overlap 1628241 1628256 GCGTGTGTAAGGCAT CGGCAGC CACCCAA GCTGCCG TTTCTCTCGCCAGCG queF 1629689 - 1628862 - | 7-cyano-7-deazaguanine reductase TERM 1066 1630707 - 1630685 - g 71 -4.8 -4.62392 | opp_overlap 1630694 CAATAACCAAATAAA CACTGATAGC GGC ACTTTCAGCG CACGTGCCGTGTTCT mtrC 1629879 - 1631114 + | membrane fusion protein precursor TERM 1067 1632023 - 1632008 - g 71 -6.1 -4.27316 | overlap 1632009 1632011 TGGGCCAACGCAAAA CCAGC CGTGCT GCTGG AGATTCGCCGCCAGC yegN 1631162 - 1634395 + | acriflavin resistance protein D acrD 1634490 - 1637588 + | acriflavin resistance protein PD1405 1638465 - 1637845 - | hypothetical protein yahK 1639793 - 1638744 - | alcohol dehydrogenase PD1407 1640455 - 1640075 - | hypothetical protein TERM 1068 1640674 - 1640659 - R 74 -10.4 -3.18383 | ATTGCCACGTACCAA CCTGGC CGCT GCCAGG AAAGCCATCATAGCT PD1408 1641318 - 1640911 - | autolytic lysozyme grx 1642911 - 1641985 - | glutaredoxin-like protein TERM 1069 1642821 - 1642811 - G 95 -8.2 -4.91109 | opp_overlap 1642818 GCCTTAGCAGAAAAA CCGC ACT GCGG CATCCCCGGACGCCC TERM 1070 1642861 - 1642851 - G 82 -5.4 -4.99043 | CCTTCATAAACAAAA CAAC ACG GTTG GAATGCAACAACGTT nodB 1642977 - 1643753 + | acetylxylan esterase aspC 1645300 - 1644026 - | aminotransferase AlaT TERM 1071 1645646 - 1645660 + H 72 -6.4 -4.35581 | opp_overlap 1645646 1645641 TAGTAATTCATTAAA CATCGA ACA TCGGTG TTTTAAATATTTTAA TERM 1072 1645751 - 1645731 - g 74 -2.5 -5.05601 | overlap 1645733 CATGACATACAAAAA TCCCCTTGC AAC GCAACAGAA TCAACGCGCTTCCAA TERM 1073 1645930 - 1645912 - g 77 -3.8 -5.00616 | CTGGCCGCCAAAAAA CTTGGACT AAA AGCCAAAG TCGTCACCCAACCGG TERM 1074 1646732 - 1646716 - g 70 -2.9 -4.72272 | overlap 1646718 CGTCTGGATGAAAAA TTTGCAC GCG GCGCAGA CAACCAAGCATTTTT hlyB 1645717 - 1647879 + | toxin secretion ABC transporter ATP-binding protein hlyD 1647876 - 1649297 + | hemolysin secretion protein D TERM 1075 1650247 - 1650231 - g 74 -6.5 -4.27192 | AAATCCCCATCAAAA CCCCATG AGC CACGGAG CTCAACGATCACCAT PD1414 1649913 - 1650434 + | hypothetical protein PD1415 1650539 - 1650811 + | hypothetical protein PD1416 1650814 - 1651437 + | hypothetical protein TERM 1076 1651517 - 1651499 - g 74 -3 -4.91459 | overlap 1651500 1651511 CAACACCTATAAAAA TGCCGG GAATTAT CCGGCG ATGTACCAGACATTG PD1417 1651434 - 1651706 + | hypothetical protein PD1418 1651709 - 1652326 + | hypothetical protein PD1419 1652323 - 1652595 + | hypothetical protein PD1420 1652598 - 1653215 + | hypothetical protein PD1421 1653212 - 1653484 + | hypothetical protein PD1422 1653487 - 1654104 + | hypothetical protein TERM 1077 1654184 - 1654166 - g 74 -3 -4.91459 | overlap 1654167 1654178 CAACACCTATAAAAA TGCCGG GAATTAT CCGGCG ATGTACCAGACATTG PD1423 1654101 - 1654373 + | hypothetical protein PD1424 1654376 - 1654993 + | hypothetical protein PD1425 1654990 - 1655262 + | hypothetical protein PD1426 1655265 - 1655882 + | hypothetical protein TERM 1078 1657184 - 1657162 - g 70 -9.8 -3.35679 | CGGGCGTATTGATAA CGGCAGCGAA CTG TTCGGCGCCG ATACCGTACTCAGCA TERM 1079 1657557 - 1657605 + G 74 -10.9 -3.53012 | opp_overlap 1657556 1657555 1657543 1657558, overlap 1657558 AGGTGACCATCAATG ACGCGGCCCGCGCC-TTGCCAGC CATCA GC-GGCAGCGGCGCGGTACGCGA TTTGCAAGAGGCCGC TERM 1080 1657558 - 1657604 + G 83 -14.4 -2.71712 | opp_overlap 1657556 1657555 1657543 1657558, overlap 1657557 GGTGACCATCAATGA CGCGGCCCGCGCC-TTGCCAGC CATCA GC-GGCAGCGGCGCGGTACGCG ATTTGCAAGAGGCCG TERM 1081 1657604 - 1657558 - g 76 -12.9 -2.80016 | opp_overlap 1657558 1657557, overlap 1657556 1657555 1657543 GGTGACCATCAATGA CGCGGCCCGCGCC-TTGCCAGCC ATC AGC-GGCAGCGGCGCGGTACGCG ATTTGCAAGAGGCCG TERM 1082 1658601 - 1658587 - g 72 -11.4 -3.15544 | CGGCACCGGCAGCAA CCGCCT AGA AGGCGG CGCCGGTAACGATGT TERM 1083 1659153 - 1659139 - g 72 -11.4 -3.15544 | CGGCACCGGCAGCAA CCGCCT AGA AGGCGG CGCCGGTAACGATGT TERM 1084 1659651 - 1659637 - g 72 -11.4 -3.15544 | CGGCACCGGCAGCAA CCGCCT AGA AGGCGG CGCTGGTAACGATGT frpC 1655882 - 1660102 + | bacteriocin TERM 1085 1660127 - 1660150 + G 100 -19.6 -3.48593 | CTGTTGTTGTGTTGC CAGGCCCCGC AGTT GCGGGGCCTG TTGTATGGCGCGATG TERM 1086 1660210 - 1660260 + G 70 -3.3 -4.81551 | gap 2, overlap 1660214 AGGTTGGCTACGGGA TGAGGTTGCCA-TGCA-CGCCGCAC GAT GTGCGGGGATGCAGTAGCGGCATTA TTTTTGATGTAAATC PD1428 1660095 - 1660424 + | hypothetical protein TERM 1087 1660571 - 1660595 + G 74 -9.9 -3.64703 | opp_overlap 1660562, overlap 1660573 TAGAAAGCGGCTGTG TGGACCGCGAC ATT GTCGCGGCCTG TTTCAATAAAGAAGC TERM 1088 1660573 - 1660593 + G 84 -12.5 -3.40597 | opp_overlap 1660562, overlap 1660571 GAAAGCGGCTGTGTG GACCGCGAC ATT GTCGCGGCC TGTTTCAATAAAGAA TERM 1089 1662393 - 1662375 - g 85 -4.4 -5.18726 | overlap 1662377 TGGGGAGAAGAAAAA GACGGGGG GTA CCGCCGTG GAACCGCGCTGGCGG TERM 1090 1662391 - 1662377 - g 70 -7 -4.22377 | overlap 1662375 GGGAGAAGAAAAAGA CGGGGG GTA CCGCCG TGGAACCGCGCTGGC PD1429 1660432 - 1664004 + | DNA helicase TERM 1091 1665467 - 1665484 + F 78 -6.3 -4.63542 | gap 1, overlap 1665468 TGTTTTACAAGATCT G-CGATGG ACT CCATCGTC TTTTTGCGCCTTGTC TERM 1092 1665468 - 1665482 + F 80 -10 -3.92577 | overlap 1665467 GTTTTACAAGATCTG CGATGG ACT CCATCG TCTTTTTGCGCCTTG TERM 1093 1666655 - 1666634 - f 75 -10.1 -3.61517 | gap 1, opp_overlap 1666634 1666652 ATGGCGTTGCAATAA GGCGG-GCAC ATT GCGCACCGCC TCTCTCTGGGTACGG TERM 1094 1667625 - 1667607 - g 74 -6.6 -4.34488 | overlap 1667608 1667609 CAGACGCACAAGAAA GCGCCTCC AGG GGAGGCAG GCGTGGGCATTCAAG PD1431 1667472 - 1667978 + | hypothetical protein TERM 1095 1668838 - 1668882 + F 72 -8.7 -3.74872 | gap 1 TCTCACACGAATGTG GACGTGGTCAGGA-ACTC CCTCCTGGTC GAGAATCCTGACCGCGTC TTTGATGAACTGGAT TERM 1096 1670069 - 1670087 + F 82 -11.7 -3.4158 | CCGCAAGGCCATGAG GGCAGCC GCTGG GGCTGCC TTGGTCATTTTTAGG TERM 1097 1670215 - 1670240 + F 75 -9.7 -3.5032 | gap 1, overlap 1670219 1670228 TCATGGCTGTACTGT GGGC-GCGCCTT GAC AGGGCGCTGCTC TGTTTGGTGTGGGCC PD1434 1670224 - 1670586 + | hypothetical protein ispH 1671668 - 1670718 - | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase lspA 1672229 - 1671726 - | lipoprotein signal peptidase ileS 1675195 - 1672364 - | isoleucyl-tRNA synthetase TERM 1098 1674310 - 1674260 - G 77 -11 -3.5394 | opp_overlap 1674265, overlap 1674263 AAACGGGTGGGCAAA GATGTGCTGCTCCATGGCGGCTCC TTT GGCGCTGCCATGGATGAGCAGTTC GGCGATGCCGTAGCG ribF 1676139 - 1675192 - | bifunctional riboflavin kinase/FMN adenylyltransferase TERM 1099 1675613 - 1675634 + g 77 -3.6 -5.06414 | gap 1, opp_overlap 1675609 1675610, overlap 1675614 GCATGAGCAAAGTCG CCCGCTGCC AGCAA GGC-GCGGA TTTTTGTTGCGGAGA mviN 1677911 - 1676301 - | virulence factor TERM 1100 1676631 - 1676657 + g 81 -12.2 -3.54424 | overlap 1676619 CAATCCCGGCTGTTG GCCCAGGGCGGC CAG GATGCCTTGGGC TTTCAGGGCGTCGGG TERM 1101 1677470 - 1677435 - G 85 -12.6 -3.59979 | gap 1 CGCCGGCATTGCAAA GCGCTGG-AAGCTGTTC AGT GCACCGCTTGCCAGCGC AGTCAGGGAAACGAA TERM 1102 1678233 - 1678223 - g 74 -8.2 -4.03888 | GATTCATAAGAATAA GGCG GCC CGCC ATAAGAGTCGGTTGA rpsT 1678011 - 1678280 + | 30S ribosomal protein S20 obgE 1679467 - 1678394 - | GTPase ObgE TERM 1103 1679569 - 1679588 + r 77 -10.6 -3.36515 | opp_overlap 1679570, overlap 1679567 1679570 TTACAAAGAAGACAA AGCCCCGC TATA GCGGGGCC TCTTTAGCCATGACC TERM 1104 1679570 - 1679587 + r 83 -14.1 -2.61695 | opp_overlap 1679570, overlap 1679569 1679567 TACAAAGAAGACAAA GCCCCGC TATA GCGGGGC CTCTTTAGCCATGAC TERM 1105 1679587 - 1679570 - R 100 -14.1 -4.42743 | opp_overlap 1679570 1679569 1679567 TACAAAGAAGACAAA GCCCCGC TATA GCGGGGC CTCTTTAGCCATGAC rpmA 1679893 - 1679636 - | 50S ribosomal protein L27 rplU 1680237 - 1679917 - | 50S ribosomal protein L21 TERM 1106 1680746 - 1680766 + G 73 -5.4 -4.60487 | gap 1, opp_overlap 1680746, overlap 1680727 CGCTATGTCGAATCA CTGTCG-GC CTAC GCGCGGCAG TTTTTGAGCGTGATG uvrA 1680575 - 1683472 + | excinuclease ABC subunit A PD1445 1684489 - 1683596 - | hypothetical protein TERM 1107 1683664 - 1683681 + g 72 -4.1 -4.82901 | TATCTAACATGGCCT TGATCCT ATGC AGGAGCA TTTTTATGGCGGGCC PD1446 1686104 - 1685040 - | hypothetical protein TERM 1108 1685570 - 1685603 + g 72 -11.1 -3.08438 | gap 1, opp_overlap 1685569 1685568 GGCCCTTCAACAACG TCCCCAACGCT-GTCA ACG TGATGAGCGCTGGGGA TCTTGGGATGTCCTG guaA 1687731 - 1686163 - | bifunctional GMP synthase/glutamine amidotransferase protein guaB 1689427 - 1687970 - | inositol-5-monophosphate dehydrogenase folD 1690419 - 1689544 - | bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase TERM 1109 1690324 - 1690343 + g 74 -7.8 -4.08767 | CAGTTTGCCTGCCGC CACACGTG CATC CACGCGTG TTTTCAAAGCATCAA gtaB 1691542 - 1690652 - | UTP-glucose-1-phosphate uridylyltransferase capD 1693449 - 1691542 - | epimerase/dehydratase protein TERM 1110 1692973 - 1692940 - G 71 -6 -4.33755 | gap 1, overlap 1692941 ACCAACAGGAACAAA CGCACCAGTACGGCG CATAT CGC-GTACTAGCGCC TCAGCGGTACGCCCA PD1452 1694439 - 1693462 - | lipopolysaccharide core biosynthesis protein PD1453 1695617 - 1694439 - | hypothetical protein PD1454 1695927 - 1695622 - | hypothetical protein ihfB 1696281 - 1695967 - | integration host factor subunit beta TERM 1111 1696341 - 1696316 - R 100 -11.9 -4.49389 | ACTTGACAACGAAAA CGGTCCAGGTA GAAC CACCTAGACCG ATCCAATCCCTAAAA rpsA 1698067 - 1696391 - | 30S ribosomal protein S1 cmk 1698965 - 1698294 - | cytidylate kinase rpmJ 1699218 - 1699343 + | 50S ribosomal protein L36 TERM 1112 1699369 - 1699396 + F 95 -11.4 -4.62783 | opp_overlap 1699376, overlap 1699376 TCTGGCAGTCTGTCC TGGAAAACCGCC TCAG GGCGGTTTTTTA TTTTTACACTGCATC TERM 1113 1699376 - 1699389 + F 100 -9.5 -5.93252 | opp_overlap 1699376, overlap 1699369 GTCTGTCCTGGAAAA CCGCC TCAG GGCGG TTTTTTATTTTTACA TERM 1114 1699389 - 1699376 - f 83 -9.5 -4.07568 | opp_overlap 1699376 1699369 GTCTGTCCTGGAAAA CCGCC TCAG GGCGG TTTTTTATTTTTACA PD1459 1699517 - 1699846 + | hypothetical protein TERM 1115 1700275 - 1700308 + G 83 -9.6 -4.07568 | gap 1, opp_overlap 1700274 1700277 GAAGCGAAAGCAGAC GACCAGTTGGTGAGC TCCTT GCACGCCAAC-GGTC TTTTCAAAAACACAC PD1460 1699846 - 1700937 + | hypothetical protein PD1461 1701026 - 1701913 + | pantothenase TERM 1116 1702587 - 1702564 - g 75 -3.8 -4.86939 | opp_overlap 1702581, overlap 1702556 1702565 GAAGAAATTGAAAAA CTCAAGCAAG GCGA CATGCTCGAA GCTAGCTTTGGCGAC traB 1702036 - 1703253 + | pheromone shutdown protein TERM 1117 1703279 - 1703269 - T 73 -2.4 -5.1861 | CCCACCATCAAAAAA CCCC AAC GGGC CTCCCATACAAACGG PD1463 1706576 - 1703415 - | hypothetical protein TERM 1118 1705598 - 1705576 - G 83 -7.6 -4.62069 | TGCTCACCCGAAAAA CCGCGTGGGA AAC TACCACGTGG CCAAACCGACGCTAA malG 1707409 - 1706573 - | ABC transporter sugar permease malF 1708287 - 1707406 - | ABC transporter sugar permease malE 1709576 - 1708284 - | ABC transporter sugar-binding protein PD1467 1711178 - 1709580 - | hypothetical protein bolA 1712024 - 1711734 - | morphogene BolA protein TERM 1119 1712801 - 1712819 + G 70 -8.8 -3.65656 | overlap 1712804 ATTCTTGATGCATTC GAAGGTCC TCT GGACCTGC TTCTGTATCTCATCC PD1469 1712639 - 1713547 + | hypothetical protein PD1470 1713534 - 1714277 + | hypothetical protein yciL 1714445 - 1715875 + | pseudouridylate synthase PD1472 1716736 - 1716275 - | hypothetical protein PD1473 1717694 - 1716882 - | hydrolase aspC 1718853 - 1717705 - | putative aminotransferase TERM 1120 1719505 - 1719480 - g 78 -2.4 -5.24129 | opp_overlap 1719500, overlap 1719481 GCCGGCCAGAAAAAA CGCCTCAGCC TGGCCC GACTGTGGCT CTCACCAGCCCCGTT ccmA 1719045 - 1719692 + | cytochrome c biogenesis protein CcmA TERM 1121 1719694 - 1719684 - f 71 -6.8 -4.0641 | CTTCACTTACAGAAA GCTC CAT GAGC GCACCGCCCCCTCCC ccmB 1719689 - 1720384 + | heme ABC transporter membrane protein ccmC 1720418 - 1721161 + | heme ABC transporter membrane protein ccmE 1721319 - 1721780 + | cytochrome c-type biogenesis protein CcmE TERM 1122 1723291 - 1723263 - g 83 -9.6 -4.16681 | gap 1 AACACCATTGGAAAA CCATGCT-CAGCG TGGC CGCGGCAGCATGG GTACTCCTAGGAACC TERM 1123 1723622 - 1723604 - g 86 -6.6 -5.00895 | overlap 1723605 CTGACGACAGAAAAA CGCCGCTA TGT CAGTGGCG GCCAAGTCACCACCG ccmF 1721900 - 1723840 + | c-type cytochrome biogenesis membrane protein TERM 1124 1724046 - 1724030 - g 70 -10.1 -3.33037 | opp_overlap 1724043, overlap 1724023 ACTGCAAATCAGCAA CACCGAC TTA GCCGGTG CCCCCTACCTGTTGC ccmG 1723833 - 1724426 + | c-type cytochrome biogenesis protein/thioredoxin ccmH 1724423 - 1724857 + | c-type cytochrome biogenesis protein cycH 1724854 - 1725513 + | truncated C-type cytochrome biogenesis protein PD1483 1725606 - 1725872 + | hypothetical protein TERM 1125 1726133 - 1726110 - g 91 -14.6 -3.14931 | opp_overlap 1726106 TCCATTTGCGATGAA GCGTGGCGGA CAAC TCCACCACGC CCGCATCGCTTACGA metX 1726048 - 1727160 + | homoserine O-acetyltransferase TERM 1126 1727315 - 1727343 + T 85 -12.5 -3.34013 | gap 1, opp_overlap 1727307 ATAGCAACGCGCAGC CGTGGAGGCCGC CGACCA GCG-CCTCCACG TTCATTCGACACATC TERM 1127 1727359 - 1727378 + T 72 -10.8 -2.82623 | opp_overlap 1727357 1727374, overlap 1727357 TTCATTCGACACATC CGGCATTT TTTG AAATGCCG TCATTGTGACCGACA pglA 1729088 - 1727481 - | polygalacturonase precursor TERM 1128 1727719 - 1727704 - G 80 -4.6 -5.01732 | opp_overlap 1727705, overlap 1727705 AATGTTGGCAAAAAA CCGTCG AATA CGACGT TATCCATGCTCAGCG TERM 1129 1729188 - 1729170 - R 72 -5.2 -4.66609 | CACCGGAGGCAAAAA GGACCAAC ATC GTTAGGCC AGCACTAGGGAGAGA TERM 1130 1729214 - 1729241 + r 79 -9.2 -4.04206 | AGAGACTCACCGTCA CATTGCGATTGC GATT GCGATTGCGATG TTTGTATCAGCATGA TERM 1131 1729552 - 1729535 - R 71 -7 -4.06687 | opp_overlap 1729534 1729535 1729537 ACTGGCGACAAACAA CATCGG AGGGCG CCGATG CTTAATATGGCCACC PD1486 1730510 - 1729821 - | hypothetical protein PD1487 1731233 - 1730544 - | phosphoglycolate phosphatase ubiG 1731960 - 1731220 - | 3-demethylubiquinone-9 3-methyltransferase PD1489 1733298 - 1731991 - | N-ethylammeline chlorohydrolase TERM 1132 1732464 - 1732454 - G 71 -4.6 -4.58685 | opp_overlap 1732454 AAAGCGGGGCAAAAA CCGG AAG CCAG TTTGAGGTTGGATTC efp 1734038 - 1733472 - | elongation factor P TERM 1133 1734091 - 1734067 - H 100 -3.5 -6.01187 | AATTAAACAAAAAAA CCGCCGC GATAGGAGGGG GCAGCGG ATACAATGAGGCAGC TERM 1134 1734106 - 1734123 + H 89 -9.1 -4.72272 | opp_overlap 1734098 GATACAATGAGGCAG CCCACCG AACA TGGTGGG TTTTTCCTCAACGCA PD1491 1734141 - 1735169 + | hypothetical protein PD1492 1736049 - 1735291 - | tRNA/rRNA methyltransferase suhB 1736169 - 1736996 + | extragenic supressor bioD 1737166 - 1737846 + | dithiobiotin synthetase int 1737843 - 1738253 + | phage-related integrase pilZ 1738680 - 1738324 - | type IV fimbriae assembly protein holB 1739636 - 1738698 - | DNA polymerase III subunit delta' PD1499 1740733 - 1739666 - | hypothetical protein TERM 1135 1739816 - 1739796 - G 72 -3.9 -4.68103 | overlap 1739798 1739801 CCAAGGGCAACAAAA TACAGCGCG TCG CCCACTGCA GGACGCGTCACAGCA trpE 1742190 - 1740832 - | hypothetical protein TERM 1136 1741773 - 1741761 - G 100 -5.5 -5.68023 | overlap 1741763 CGACAATCAAAAAAA CACCA CTG TGGCG GTCACGTAATACCGC TERM 1137 1742007 - 1741981 - G 73 -5.1 -4.62302 | gap 1, opp_overlap 1741993, overlap 1741982 1741983 CAATACCTGCAAAAA GTCTCCGGACAG CGCC CTGCCCTGAG-C ATCGCGTGTTACACC TERM 1138 1742133 - 1742112 - G 86 -7.2 -4.7173 | overlap 1742123 1742124 CAGTAGATTCAAAAA GCGCCGGA TAACGC TCCGGTGC CAACCGGTGCATGGA TERM 1139 1742279 - 1742263 - R 76 -8.7 -4.12532 | overlap 1742267 CCGCCTACATAGAAA CATAGCG AGG CGCCATG CCATCGGAAAAGCGC TERM 1140 1742374 - 1742350 - R 95 -12.1 -4.04318 | TTTACACAGTATAAA GGGCGCATCGC TCA ACCATGCGCCC CTCTCAAACGTGTCA fabB 1743642 - 1742407 - | 3-oxoacyl-(acyl carrier protein) synthase II TERM 1141 1743748 - 1743727 - R 100 -11.5 -5.06414 | overlap 1743729 GCGTTGTAATAAAAA CAGGGCCGC AGCA GCGGCCCCA TGCAGATGACGCAGA TERM 1142 1743746 - 1743729 - R 100 -14.1 -4.16307 | overlap 1743727 GTTGTAATAAAAACA GGGCCGC AGCA GCGGCCC CATGCAGATGACGCA acpP 1744038 - 1743799 - | acyl carrier protein fabG 1744952 - 1744209 - | 3-ketoacyl-(acyl-carrier-protein) reductase TERM 1143 1744933 - 1744943 + g 75 -6.8 -4.42287 | opp_overlap 1744928, overlap 1744928 ACTAACGCAACCTCA CCCT GTA AGGG TTTGTTCATTGTTTC fabD 1746013 - 1745060 - | acyl-carrier-protein S-malonyltransferase TERM 1144 1745372 - 1745350 - G 95 -14.2 -3.26596 | overlap 1745345 1745370 TCCAAACCAACCCAA GCATCGCCTC AGC GAGACGATGC GCAGCATCACGCATT aceE 1746507 - 1749197 + | pyruvate dehydrogenase subunit E1 TERM 1145 1749373 - 1749346 - T 82 -12.1 -3.40899 | opp_overlap 1749340 AAGTGTTGATGACAA TCCCTCGCAAT CGGTGC ATCGCGAGGGA TGCCATTCATACCAT TERM 1146 1749578 - 1749555 - T 100 -19.6 -3.67611 | GCCATCCCAACACAA CAGGCCCCGC AACT GCGGGGCCTG GCAACACAACAACAG PD1506 1754420 - 1749603 - | hemolysin-type calcium binding protein TERM 1147 1750552 - 1750566 + g 74 -11.4 -3.21912 | ACATCGTTACCGGCG CCGCCT TCT AGGCGG TTGCTGCCTTCGCCG TERM 1148 1751050 - 1751064 + g 74 -11.4 -3.21912 | ACATCGTTACCGGCG CCGCCT TCT AGGCGG TTGCTGCCTTCGCCG TERM 1149 1751602 - 1751616 + g 74 -11.4 -3.21912 | ACATCGTTACCGGCG CCGCCT TCT AGGCGG TTGCTGCCTTCGCCG TERM 1150 1752100 - 1752114 + g 72 -11.4 -3.15544 | opp_overlap 1752091 1752088 ACATCATTACCAGCG CCGCCT TCT AGGCGG TTGCTGCCCATGCCG TERM 1151 1752411 - 1752423 + g 71 -10.5 -3.16564 | GGGTTTCCAGCCGCT CGCCG CTA CGGCG TTACTGCCATAGCGG PD1507 1754983 - 1754438 - | hypothetical protein TERM 1152 1754593 - 1754580 - G 76 -5.3 -4.82901 | CTTGCCCGAGAAAAA CTTGA ATAT TCAAG AAAAGAAGGCTTGAC PD1508 1755241 - 1754993 - | hypothetical protein PD1509 1755896 - 1755465 - | hypothetical protein TERM 1153 1755575 - 1755594 + g 81 -3.5 -5.22006 | opp_overlap 1755576, overlap 1755576 AAGGCACTTTCAGAG AGCAGCT CAAAGA AGCTGCA TTTTTGTTCTCATCA PD1510 1756434 - 1756018 - | hypothetical protein PD1511 1757158 - 1756592 - | hypothetical protein TERM 1154 1757268 - 1757280 + r 70 -9.1 -3.4439 | TTTGATGCAGTGATG CGCTG GGG CAGCG TTGTACGTTGCTGTA ispA 1758649 - 1757774 - | farnesyl-diphosphate synthase xseB 1758912 - 1758646 - | exodeoxyribonuclease VII small subunit mesJ 1760257 - 1758944 - | cell cycle protein TERM 1155 1760679 - 1760695 + r 78 -12.3 -2.7169 | overlap 1760676 1760672 TCAGGGAGGCATGGT GGGAGTG GTT CACTCCC TGCTCTGGTCTTTGC phoA 1762385 - 1760688 - | alkaline phosphatase gltT 1762533 - 1763846 + | glutamate symport protein PD1517 1765436 - 1764588 - | hypothetical protein PD1518 1766120 - 1765482 - | hypothetical protein slyD 1766147 - 1766626 + | peptidyl-prolyl cis-trans isomerase TERM 1156 1767394 - 1767408 + G 74 -2.1 -5.06414 | ATCATCAACGGCGTA CATGT GTTAG GCATG TTTTTGTTGGGAACG TERM 1157 1767487 - 1767532 + G 100 -15.5 -3.30854 | TTGTTCGCTTGGCTG CGTTGGGGTGCATGGCCGTTA GGGT TAACGGCTATGCTGCTCAGCG TTCATCTGGCTTCTT yxaH 1766689 - 1767939 + | transport protein TERM 1158 1768693 - 1768708 + G 71 -10.4 -3.17319 | overlap 1768692 GTGTGTGTCGCCGGT GCTGGC GTAT GCCAGC TATTGGTCAGTTGGC glpG 1768381 - 1769043 + | integral membrane protein PD1522 1769243 - 1769022 - | hypothetical protein TERM 1159 1769177 - 1769164 - G 78 -6.7 -4.59982 | overlap 1769160 TGATAATGAAACAAA GCATG GTGC CATGC AATCCGACACAAACG TERM 1160 1769303 - 1769293 - R 80 -6.8 -4.59342 | opp_overlap 1769291 1769293 GCCAGGATAAATAAA CACC CCT GGTG TATTCCTTATGTGTC nth 1769993 - 1769355 - | endonuclease III PD1524 1770469 - 1770038 - | hypothetical protein TERM 1161 1771301 - 1771286 - g 71 -4.6 -4.64598 | overlap 1771274 1771295 GAAGCATTCCAAAAA CGCGAA CAAG CCCGCG CACAGCAAGCGAAGG PD1525 1771025 - 1771723 + | macrophage infectivity potentiator TERM 1162 1771744 - 1771778 + F 86 -12.1 -3.64198 | opp_overlap 1771739 CACCCATATACGTAT GACGACGCCGGTTCT ATCAC AGCGCAGGCGTCGTC TTATGTATGTCCACA TERM 1163 1772465 - 1772447 - f 76 -5.2 -4.83615 | CAGGGCGGACAAAAA GGCAATGA CCC CCACCGCC TGGATCACCTGGGTG TERM 1164 1772710 - 1772686 - f 71 -7.2 -4.10161 | gap 1, overlap 1772673 1772689 1772694 CACTAGTCTTGAAAA CTAGCAAGGGG GTAA CCCCTT-CCAG GGTTCGAATCCCTGA PD1527 1772758 - 1773234 + | hypothetical protein PD1528 1773249 - 1773953 + | hypothetical protein TERM 1165 1774697 - 1774717 + G 81 -12.7 -3.01712 | overlap 1774699 GTCAAGCGTATCGCA GAGTTCGAA AAT TTCGAACTC TGTTGAGAAAAAGAC PD1529 1774364 - 1774723 + | hypothetical protein TERM 1166 1774699 - 1774715 + F 70 -9.5 -3.06696 | overlap 1774697 CAAGCGTATCGCAGA GTTCGAA AAT TTCGAAC TCTGTTGAGAAAAAG PD1530 1774932 - 1775189 + | hypothetical protein PD1531 1775489 - 1775755 + | hypothetical protein aroE 1776598 - 1775750 - | shikimate 5-dehydrogenase TERM 1167 1776242 - 1776228 - G 73 -9.2 -3.84246 | GCGCCAAGCAGCAAA GCGCGG CGA CCACGC AAATCCAAACCATGC TERM 1168 1776771 - 1776760 - R 72 -3 -4.91511 | overlap 1776761 ATCTCATTATAAAAA TGAT GAAT ATCA TCCCGCTCACCCATG PD1533 1777244 - 1776936 - | hypothetical protein TERM 1169 1777522 - 1777539 + H 100 -14.1 -5.60864 | AATTAAGTCTCATTT GGCCGCC CCAT GGCGGCC TTTTTTTCCTCTCTA TERM 1170 1778998 - 1778984 - g 74 -11.4 -3.16742 | opp_overlap 1778983 CTGAACCTGCATCAA GCCTGC AAA GCAGGC ATTGACTACGTTGCA thiD 1778270 - 1779094 + | phosphomethylpyrimidine kinase dsbD 1781535 - 1779259 - | c-type cytochrome biogenesis protein TERM 1171 1780976 - 1780961 - G 70 -6.8 -4.08945 | ACGATGGCCTCAAAA CCGAAC GCCT GCTCGG CTGGAAGCGGCAATG cutA 1781870 - 1781532 - | periplasmic divalent cation tolerance protein groES 1782486 - 1782773 + | co-chaperonin GroES TERM 1172 1782941 - 1782917 - g 73 -5.6 -4.66163 | opp_overlap 1782927 1782931 1782937, overlap 1782918 ATTTTCAGTGAAAAA GCCCGTTCAC GTATG GTGCACGGGG TGAACCTGCTTGCTA TERM 1173 1783889 - 1783870 - g 80 -5 -4.86731 | overlap 1783872 CGTCTCTAAAGAAAA CACCACCA TTAT TGATGGTA TGGGTGACAACGATG groEL 1782884 - 1784527 + | chaperonin GroEL TERM 1174 1784581 - 1784564 - T 100 -8.3 -5.1675 | opp_overlap 1784564 GTATTTATCAAAAAA GCCCTGC TCAC GCGGGGC TTTTTTTCTGCGGCG TERM 1175 1784564 - 1784581 + T 100 -10.5 -5.60993 | opp_overlap 1784564 GTATTTATCAAAAAA GCCCTGC TCAC GCGGGGC TTTTTTTCTGCGGCG PD1539 1786895 - 1784808 - | hypothetical protein TERM 1176 1785528 - 1785538 + g 74 -6.8 -4.27316 | overlap 1785524 CTTTTGATCGAGCGT TGCG GCA CGCA TTTTCGCTTCAGCAA TERM 1177 1786343 - 1786323 - G 77 -11.1 -3.5774 | overlap 1786337 1786340 ACCCAACTGGCGAAA GCGCTGCCA ACA CAGCAGCGC CAAAGGCGCTGGAAA PD1540 1787485 - 1786886 - | hypothetical protein TERM 1178 1787326 - 1787316 - G 76 -3.2 -5.03747 | AAATTGTTGAAAAAA CGGA ATA TCCA AAATAATAAACCCAC PD1541 1787910 - 1787482 - | hypothetical protein dmt 1788832 - 1787879 - | dolichol-phosphate mannosyltransferase TERM 1179 1788729 - 1788740 + gr 80 -4.4 -5.055 | opp_overlap 1788719 GCAACGATATAGGTA TCAG TCCT CTGA TTTTTTGCAAGTTCC rfbB 1789824 - 1788835 - | dTDP-glucose 4-6-dehydratase rmd 1790769 - 1789855 - | NDP-hexose epimerase/oxydoreductase gmd 1791810 - 1790770 - | GDP-mannose 4,6 dehydratase mtfA 1794442 - 1791902 - | mannosyltransferase PD1547 1795816 - 1794446 - | hypothetical protein cysM 1797877 - 1796507 - | cystathionine beta-synthase TERM 1180 1797977 - 1797941 - R 73 -10.1 -3.46965 | overlap 1797945 AACAGAGCAGTATAA GCAACGAGCGGCAGG GAAATAA CTCACCGCTCGCTGC AAGAGACATTGTTAT uptF 1798228 - 1798007 - | UptF protein uptE 1799478 - 1798546 - | outer membrane protein UptE precursor uptD 1799873 - 1799481 - | outer membrane protein UptD precursor TERM 1181 1800996 - 1800976 - g 77 -4.6 -4.88293 | overlap 1800977 AATGTCAAAAACAAA CGCTGGGG TCTGG CCCCATCA GCAGCATTTGGCCTG fhuA 1800205 - 1802556 + | catecholate siderophore receptor Fiu PD1553 1802601 - 1803293 + | putative hydroxylase PD1554 1803303 - 1803953 + | hypothetical protein TERM 1182 1804226 - 1804207 - g 70 -10 -3.41795 | overlap 1804208 AAATGGTTACCAGAA CTGCGCCA GTGG TGGCGCAA GAGCGGCCGTACCGT PD1555 1803979 - 1804506 + | hypothetical protein PD1556 1804531 - 1805334 + | hypothetical protein apbE 1805446 - 1806381 + | thiamine biosynthesis lipoprotein ApbE precursor comE 1807440 - 1807111 - | DNA transport competence protein PD1559 1807962 - 1808984 + | hypothetical protein TERM 1183 1809019 - 1808987 - g 74 -8.3 -3.93782 | GGAGTCAACATGAAA GCACTGATCTTTGCC GCA GGCATCGGTCAGCGC ATGCGTCCACTAACA PD1560 1808981 - 1809703 + | nucleotidyl transferase TERM 1184 1809722 - 1809708 - T 72 -2.8 -5.0133 | opp_overlap 1809708 CACGCTTCTAAAAAA GATGAA ATT TTCTTC ATTTTCCAACACTAA PD1561 1810587 - 1809886 - | hypothetical protein perM 1811741 - 1810584 - | permease PD1563 1812910 - 1811738 - | hypothetical protein purM 1812961 - 1814016 + | phosphoribosylaminoimidazole synthetase PD1565 1813988 - 1814227 + | hypothetical protein purN 1814330 - 1814998 + | phosphoribosylglycinamide formyltransferase TERM 1185 1815372 - 1815358 - g 74 -4.2 -4.79352 | TCATCCACAACAAAA GCAACA ACG TGTGGC AAGTGAACCTAATAA PD1567 1815063 - 1815920 + | hypothetical protein PD1568 1815924 - 1816607 + | hypothetical protein tdk 1817820 - 1817194 - | thymidylate kinase TERM 1186 1817366 - 1817349 - G 77 -7.7 -4.28361 | CCAATGCTAGGAAAA TGTCACG GCAA CGCGACA GATTTTCCGTAGTTT TERM 1187 1818491 - 1818477 - H 77 -7.1 -4.43832 | overlap 1818474 GAAGATACAAAACAA CGGCA TACCC TGCCG GAGCCTGACACCTCG TERM 1188 1819366 - 1819380 + G 74 -10 -3.66378 | opp_overlap 1819349 1819365 CGCCGATAAGATCAT CGCGTT TGA AACGCG TTTGGCTAAGGTCTC TERM 1189 1819896 - 1819876 - g 75 -11.2 -3.37056 | AGCACGCATTGAGAA GCTGGACT GGATG AGTCCAGC CACTAAATCCAAAGC TERM 1190 1820356 - 1820345 - g 73 -5.8 -4.4767 | GCACGTACCACAAAA CTGG TCAC CCAG TTCAACAGCTACCGC PD1570 1818623 - 1820725 + | metallopeptidase TERM 1191 1820761 - 1820737 - T 81 -13.5 -2.74597 | overlap 1820734 GTGATATACACATGA TCCGCCCTGCA TCA CGCAGGGCGGG CGGGCAGAAACACCC TERM 1192 1820815 - 1820774 - T 72 -9.3 -3.51934 | opp_overlap 1820806, overlap 1820772 1820775 GGGCGGGCAGAAACA CCCAGCGACCGCGTCATCA TGAT CGGTGACACGGTCGCCCGC TTGGCACCTGATCTA TERM 1193 1820814 - 1820775 - T 78 -12.8 -2.70946 | opp_overlap 1820806, overlap 1820774 1820772 GGCGGGCAGAAACAC CCAGCGACCGCGTCATCA TGAT CGGTGACACGGTCGCCCG CTTGGCACCTGATCT PD1571 1821101 - 1820790 - | hypothetical protein fabA 1821919 - 1822440 + | 3-hydroxydecanoyl-(acyl carrier protein) dehydratase TERM 1194 1822555 - 1822523 - f 76 -5 -4.73682 | overlap 1822546 1822550 TCCCACAACACAAAA CGCAGCGTG-ATCGAC CGA ATCAATGCAC-CTGCG CACATCATCATCTAA TERM 1195 1822768 - 1822797 + F 80 -10.1 -4.011 | opp_overlap 1822774 1822776 ACTAAAACACTGGAA GCTAAAGACAGAC GCTT GTCTGTTGTTAGC TTATTTCACTATTAC TERM 1196 1823235 - 1823195 - f 83 -13.5 -3.27259 | opp_overlap 1823206, overlap 1823196 GACATAGATCAGCAA CTCGCATTGAATCTTGAAC AAC GCTCAAGATTTAATGCGAT AAGAAATCGATCATG TERM 1197 1823234 - 1823196 - f 95 -17 -2.55874 | opp_overlap 1823206, overlap 1823195 ACATAGATCAGCAAC TCGCATTGAATCTTGAAC AAC GCTCAAGATTTAATGCGA TAAGAAATCGATCAT TERM 1198 1823916 - 1823895 - g 86 -10.1 -4.25848 | AAGGCTTCACCAAAA TCGCGTTGG GCCA CCACCGCGA CGATATGGTTGCAAC PD1573 1823435 - 1824334 + | hypothetical protein TERM 1199 1824670 - 1824652 - g 74 -4.4 -4.7261 | overlap 1824648 1824654 ATTGAGGAAAAGAAA GGCCACCC TCC AGGCGGAC GTGAACGCAAACGCA rdgC 1824373 - 1825281 + | recombination associated protein TERM 1200 1825494 - 1825521 + G 78 -2.5 -5.26875 | overlap 1825496 GCCTGACCCTGCCAC CATGCGCCAGC CTGGAC GCTGGCACCCG TTTTTTGCTTGAACA PD1575 1825313 - 1826107 + | hypothetical protein TERM 1201 1826405 - 1826385 - T 90 -10.5 -4.33165 | TCAAATGCACTAAAA TGCAGCATT GGC AACGCTGCA CTACAACACAGGGCA hemH 1827406 - 1826444 - | ferrochelatase TERM 1202 1827339 - 1827327 - G 74 -10.5 -3.48772 | AATTCGCCCAGATAA CGGCG CAC CGCCG CCGCAGTCGGCGCCT PD1577 1827579 - 1828484 + | hypothetical protein tatA 1828559 - 1828774 + | twin argininte translocase protein A tatB 1828792 - 1829208 + | sec-independent translocase tatC 1829205 - 1829945 + | SEC-independent protein translocase PD1581 1830918 - 1830010 - | hypothetical protein TERM 1203 1831226 - 1831196 - R 82 -11 -3.53343 | overlap 1831221 AACCTCCCTCTTAAA CGGCGCGACGTGCA TAA CGCACAAAGCGCCG CAACACCTGACGCGC guaA 1831913 - 1831191 - | glutamine amidotransferase PD1583 1832288 - 1832686 + | hypothetical protein az1 1832833 - 1833288 + | electron transfer protein azurin I TERM 1204 1833364 - 1833348 - T 72 -5.1 -4.57569 | GCAGGCTCCTAAAAA GGCCAAA GCC TCTGACC TAACTCCATTTCCGC PD1585 1834542 - 1833517 - | ribosome-associated GTPase PD1586 1835234 - 1834869 - | hypothetical protein PD1587 1836968 - 1835238 - | hypothetical protein TERM 1205 1836957 - 1836947 - G 72 -2.6 -4.94058 | GTAACGGAAAGAAAA TTTT TGC AAAA CGCGGGTTCATTGAG PD1588 1837050 - 1837871 + | hypothetical protein TERM 1206 1838398 - 1838387 - g 76 -3 -5.09762 | AGGTCAACACAAAAA TGAA GACA TTCA GTAGATACACGCCAG TERM 1207 1838436 - 1838408 - g 76 -11.7 -3.02947 | opp_overlap 1838399 CATTCAGTAGATACA CGCCAGCGTTGAA TCA TTTAGCGCTGGCG CTAGCGTCAACATTG TERM 1208 1839001 - 1838988 - g 80 -4.5 -5.07486 | CATTCTGAAGAAAAA CTACG AAGG CGCAG AAGTCAACATTGGCT TERM 1209 1840278 - 1840301 + G 71 -9.6 -3.53091 | AGAAGGCCGCTTCAC CCCAGACG AGTATCAG CGTCTGGG TTTGGGCCGGACGGT btuB 1838386 - 1841511 + | TonB-dependent receptor TERM 1210 1841533 - 1841556 + F 100 -16 -5.00616 | opp_overlap 1841535 CCGCATAATGCGACA CAGGGGCCGG CTTG CCGGCCCTTG TTTTTTGGGCAAGCA TERM 1211 1841554 - 1841535 - f 72 -10.6 -2.92653 | opp_overlap 1841533 GCATAATGCGACACA GGGGCCGG CTTG CCGGCCCT TGTTTTTTGGGCAAG TERM 1212 1841886 - 1841874 - g 78 -6.2 -4.82901 | CTGGCCGCAGAAAAA GCGG GCATG CCGC CGGAAGCCTTTATCG metG 1841691 - 1843763 + | methionyl-tRNA synthetase ydgM 1844526 - 1844945 + | ferredoxin TERM 1213 1845419 - 1845401 - T 74 -6 -4.68124 | opp_overlap 1845407 1845408, overlap 1845394 CCAACACACACAAAA GTGACACT GGC AATGCCAC TTCGTGACTAAAACC PD1592 1846416 - 1845748 - | hypothetical protein TERM 1214 1846205 - 1846195 - G 100 -8.2 -5.34055 | overlap 1846196 AGAAAGATCAAAAAA GCGC GCA GCGC AACCTTTGTCCCCAG PD1593 1847249 - 1846821 - | hypothetical protein TERM 1215 1847172 - 1847134 - G 75 -11.7 -2.867 | gap 1, opp_overlap 1847165, overlap 1847124 1847126 ATGAACACCAGCACA CCCAGGC-CCTGCGCCCA GTGC TGGGCGCAGACGCCCGAT GGCGTGTCATACCAC PD1594 1847810 - 1847376 - | hypothetical protein PD1595 1847946 - 1847752 - | phage-related endolysin TERM 1216 1847826 - 1847802 - GR 75 -11.4 -3.03771 | opp_overlap 1847799 1847800, overlap 1847805 CGACACGGCGCAACA CCAGGCCACG CACTT CGTGGCCTGC GGCGTATTTCCAGCG TERM 1217 1847823 - 1847805 - GR 76 -11.7 -2.74192 | opp_overlap 1847799 1847800, overlap 1847802 CACGGCGCAACACCA GGCCACG CACTT CGTGGCC TGCGGCGTATTTCCA PD1596 1848298 - 1847783 - | hypothetical protein PD1597 1848561 - 1848295 - | hypothetical protein PD1598 1850707 - 1848608 - | phage-related terminase large subunit TERM 1218 1849038 - 1849065 + g 71 -9.8 -3.54638 | opp_overlap 1849029 1849028, overlap 1849028 GGAAAGCGCAGCATG CGGGCGCTGATG TCTT CAGCAGTGCCTG TTTGGGCGGCGTTGT TERM 1219 1849861 - 1849850 - G 74 -7.2 -4.07568 | opp_overlap 1849850 1849851, overlap 1849851 GTGGGGGTGCCAAAA GGCG GTGC CGCC GGTGCCGCGTTCTTT PD1599 1851294 - 1850704 - | hypothetical protein vapE 1853178 - 1851709 - | virulence-associated protein E PD1601 1854230 - 1853175 - | hypothetical protein TERM 1220 1853680 - 1853697 + g 76 -3.3 -5.00884 | GGACTCACGCACCAG GTGAGCG TCGG CGTCCAC TTTTTTAGCGCCCCT PD1602 1854823 - 1855152 + | hypothetical protein ssb 1855136 - 1855582 + | single-strand DNA-binding protein PD1604 1855601 - 1855876 + | hypothetical protein TERM 1221 1855944 - 1855934 - Tf 74 -6.8 -4.30014 | opp_overlap 1855933, overlap 1855935 TTGATCAATCCAAAA TCCC AAA GGGA ATCTATTGGGGGGAT TERM 1222 1857979 - 1857952 - gT 73 -11.2 -2.73364 | CGGCGACCGCAAGCA TGGCGTTGGCCG TGCC CGGCCGAGGCCA ACGCCCGCACGGCGC PD1607 1859970 - 1858516 - | modification methylase NspV PD1606 1857865 - 1858659 + | hypothetical protein nspV 1860629 - 1859967 - | type II restriction enzyme NspV TERM 1223 1860808 - 1860796 - R 71 -10.5 -2.64422 | ACACACCCCAGAGCA CGCGC CCA GCGCG GCCAGCAGCGGACGC TERM 1224 1860864 - 1860907 + r 77 -7.2 -4.4078 | opp_overlap 1860875 1860876 GTCAAGGCCGCAACC CCAGCAACCAAGCCGCTTGC AGCC GCTGGCGGGTTGTGTGCGGG TTTTGGTTGCGCAGC TERM 1225 1860973 - 1860948 - R 76 -7.5 -4.30995 | opp_overlap 1860948 1860948 1860950 1860971, overlap 1860945 1860951 CGGCCTAGAAAAGAA GAAGCCCCGCA TCGC TGCGAGGCCTG CTTTTAAGCTGCTTT TERM 1226 1860970 - 1860951 - R 91 -11.4 -4.26938 | opp_overlap 1860950 1860948 1860948, overlap 1860948 1860945 CCTAGAAAAGAAGAA GCCCCGCA TCGC TGCGAGGC CTGCTTTTAAGCTGC pilE 1861602 - 1861174 - | type IV pilin pilY1 1866044 - 1861626 - | fimbrial assembly protein TERM 1227 1863053 - 1863039 - G 71 -10 -3.57263 | opp_overlap 1863038, overlap 1863050 ACCCTTATCGTCAAA GGCATG CAA CATGCC ATCGTTAGCACCAAC PD1612 1866686 - 1866195 - | fimbrial assembly protein TERM 1228 1866518 - 1866508 - G 70 -6.8 -4.08216 | TCAGCCCTCTGAAAA GCCA TAT TGGC CGCAAGATAATTCGC TERM 1229 1866635 - 1866623 - G 74 -4.8 -4.71223 | overlap 1866625 GCACAACATATAAAA CAGC TCCCT GCTG GGAACGTGCGCGACC PD1613 1867939 - 1866689 - | hypothetical protein PD1614 1868430 - 1867942 - | hypothetical protein PD1615 1868933 - 1868421 - | hypothetical protein PD1616 1870473 - 1869079 - | hypothetical protein TERM 1230 1870051 - 1870020 - G 77 -8.1 -4.13728 | opp_overlap 1870020 CAGATACCTGCAAAA TGCGCGCGT-TGCGC AACT GCGCAAACAC-CGCA TTCGTAATCCCATCA TERM 1231 1870588 - 1870568 - R 75 -9.7 -3.50869 | opp_overlap 1870568 GAGGAGGTCACACAA CGTCAGCAA CAG TCGCCGACG TTGTGAAGCACGATG PD1617 1872472 - 1870904 - | hypothetical protein TERM 1232 1872442 - 1872421 - G 71 -5.8 -4.3665 | overlap 1872423 1872437 CAATTGAAACAGAAA GACACGCT ATGCAA AGCGTGGC ACCGACGATAAGAGT TERM 1233 1873188 - 1873174 - H 100 -8.6 -5.1675 | overlap 1873183 TTAGCTACTAAAAAA GCATCA AAA TGATGC TAAGCCATCAGCCAG TERM 1234 1873553 - 1873569 + G 85 -9.3 -4.4773 | overlap 1873552 TCAGGCACGGTCTCG CGCCGCC AGT GGCGCCG TTTTCATTGATGTAC moeB 1873512 - 1874651 + | molybdopterin biosynthesis protein MoeB engA 1876289 - 1874892 - | GTP-binding protein EngA PD1620 1877538 - 1876315 - | serine/threonine protein kinase PD1621 1878189 - 1877551 - | hypothetical protein PD1622 1879134 - 1878268 - | hypothetical protein PD1623 1879881 - 1879141 - | hypothetical protein PD1624 1881157 - 1879937 - | hypothetical protein ndk 1881593 - 1881168 - | nucleoside diphosphate kinase TERM 1235 1881650 - 1881669 + H 70 -9.2 -3.40836 | opp_overlap 1881651 GTCTACATGAAAAAA ACCCGCGT CTGA ACGCGGGC TTAGCTTATTTTTAC TERM 1236 1881668 - 1881651 - H 100 -12.7 -5.58454 | opp_overlap 1881650 TCTACATGAAAAAAA CCCGCGT CTGA ACGCGGG CTTAGCTTATTTTTA TERM 1237 1883968 - 1883958 - g 74 -6.8 -4.3277 | overlap 1883960 TATACAGAAGACAAA GTGG TAG CCAC CGACTTCCGCGGTGA gapA 1883112 - 1884122 + | glyceraldehyde-3-phosphate dehydrogenase TERM 1238 1884678 - 1884660 - T 72 -6 -4.53774 | opp_overlap 1884660 1884663, overlap 1884661 1884676 AGAAATCAAGCAAAA GGATCATG CAA CATGATCG TGTGCTCTCGGTCTG TERM 1239 1884677 - 1884661 - T 73 -9.5 -3.30638 | opp_overlap 1884660 1884663, overlap 1884660 1884676 GAAATCAAGCAAAAG GATCATG CAA CATGATC GTGTGCTCTCGGTCT purA 1885942 - 1884650 - | adenylosuccinate synthetase TERM 1240 1885128 - 1885097 - G 72 -11 -3.10012 | gap 1, opp_overlap 1885097, overlap 1885109 AATTTTATCATCCAA CTCG-GTTGGAAATG GAC CACCTCCAACACGAG TTGCATAAGCCTTAG PD1628 1886428 - 1886156 - | hypothetical protein hflC 1887364 - 1886501 - | integral membrane proteinase TERM 1241 1886620 - 1886610 - G 78 -6.8 -4.63928 | AGACTACGGTAAAAA GCGT AGA ACGC GGGGTCATTAGCACC hflK 1888500 - 1887361 - | HflK protein PD1631 1888645 - 1889649 + | hypothetical protein pilH 1889730 - 1890128 + | PilH family regulatory protein TERM 1242 1890635 - 1890614 - T 77 -7.3 -4.53303 | TATGCGCACAGAAAA GTGAGTGAA TCAA TTCACACAC GCATTATCCAACTCT PD1633 1891074 - 1890724 - | transmembrane signal peptide protein TERM 1243 1890822 - 1890811 - G 74 -3 -4.90778 | CTGACCCAAATAAAA TGTT GAGA AACA AGCGAATATCAAAAG TERM 1244 1891346 - 1891332 - R 73 -10 -3.34506 | opp_overlap 1891331, overlap 1891323 AGACAACGACATGAA GCCATC CAA GATGGC ATTAGTCAACAGAAA TERM 1245 1892153 - 1892133 - R 79 -9.9 -3.7956 | overlap 1892152 TAAATAAGCTAATAA TCTTTTTTG TTT CAAAAAAGA TTCAAAATCCTGAAA TERM 1246 1892162 - 1892152 - R 76 -4 -5.00616 | overlap 1892133 TTTTGTTTCAAAAAA GATT CAA AATC CTGAAAACTATCACC bbh3 1892547 - 1892173 - | DNA-binding protein proS 1894385 - 1892691 - | prolyl-tRNA synthetase PD1636 1894820 - 1894470 - | hypothetical protein pssA 1895013 - 1895783 + | phosphatidylserine synthase TERM 1247 1895927 - 1895901 - g 84 -5.9 -5.04733 | gap 1 CAAGCACAAACAAAA CGCCGTCTACCA TGCC TGA-AAACGGCG CAATGCCTGAGATAC PD1638 1895780 - 1896205 + | hypothetical protein TERM 1248 1896244 - 1896220 - g 71 -7.2 -3.94936 | gap 1, opp_overlap 1896221, overlap 1896222 AATGAACACACTAAA GA-CCTCACCG CTAC CGGTAAGGCTC TGTACGCTACGCGAA TERM 1249 1896241 - 1896222 - g 71 -10 -3.55205 | opp_overlap 1896221, overlap 1896220 TGAACACACTAAAGA CCTCACCG CTAC CGGTAAGG CTCTGTACGCTACGC rimI 1896206 - 1896676 + | ribosomal-protein-alanine acetyltransferase bglX 1899626 - 1897404 - | beta-glucosidase PD1641 1901527 - 1900109 - | hypothetical protein folB 1902003 - 1901641 - | dihydroneopterin aldolase gcp 1903132 - 1902086 - | O-sialoglycoprotein endopeptidase TERM 1250 1902214 - 1902204 - G 70 -6.8 -4.08064 | AACGCCCCGGCAAAA GCGA TCA TCGC ACCGTTATCCGTACA rpsU 1903305 - 1903520 + | 30S ribosomal protein S21 TERM 1251 1904111 - 1904091 - g 84 -8.9 -4.27062 | GCAATCAAAACCAAA CTTGCCGGC CAA GCCGACATG GGACAAGTCTCTGCA PD1645 1903707 - 1904153 + | hypothetical protein TERM 1252 1904986 - 1904999 + G 72 -2.3 -4.84761 | CACTGGTGCTGTACA CGCTA GCCT TTGCG TTTTTATACCGCTAT rbn 1904397 - 1905275 + | ribonuclease BN TERM 1253 1906627 - 1906611 - g 74 -2.9 -4.8384 | overlap 1906612 TAAAGAAGGCAAAAA CGCATTC AAC GAACGCC TCAAACAAGCCATCC dnaG 1905556 - 1907289 + | DNA primase PD1648 1907921 - 1907574 - | hypothetical protein PD1649 1908791 - 1908267 - | DNA modification methylase TERM 1254 1908503 - 1908513 + g 81 -8.2 -4.23528 | opp_overlap 1908502, overlap 1908504 GGATAGTCCACACAT CGCC TAT GGCG TTTGCTTTTGGCTTC TERM 1255 1909102 - 1909126 + r 70 -5.1 -4.42238 | gap 1 ATAGCTATCTCAGTT CGT-TAACGC AGAATA GCGTTAGACG TTTTCCTTGACCTGA TERM 1256 1909553 - 1909565 + r 74 -3.3 -4.97405 | GCCCAGCTTTTAGAC GACGC AAA GCGTG TTTGTTTTTCTCCCT trpS 1911392 - 1910085 - | tryptophanyl-tRNA synthetase TERM 1257 1910445 - 1910429 - G 70 -6.5 -4.09739 | GCAACCGTGCCAAAA GTGGGAT TGC ATCCCTC TCCCGCAAACGCCCC recD 1914027 - 1912108 - | exodeoxyribonuclease V alpha chain TERM 1258 1913650 - 1913593 - G 80 -10.6 -3.90744 | gap 3, overlap 1913594 1913602 TGCCTGTGGAAACAA CGCCGCAAACACCGTCGCCACCGCGGCCG ATT CAGCC--GGTGGCAACCGTG-CAGCGGCA ATCCGACGCAAACCG TERM 1259 1913649 - 1913594 - G 75 -11.9 -2.94232 | gap 3, overlap 1913593 1913602 GCCTGTGGAAACAAC GCCGCAAACACCGTCGCCACCGCGGCCG ATT CAGCC--GGTGGCAACCGTG-CAGCGGC AATCCGACGCAAACC TERM 1260 1913642 - 1913602 - G 77 -11.2 -3.59649 | gap 2, overlap 1913594 1913593 AAACAACGCCGCAAA CACCGTCGCCACCGCGGCCG ATT CAGCC--GGTGGCAACCGTG CAGCGGCAATCCGAC recB 1917988 - 1914257 - | exodeoxyribonuclease V beta chain recC 1921350 - 1917985 - | exodeoxyribonuclease V gamma chain TERM 1261 1921183 - 1921141 - G 83 -7.6 -4.65895 | opp_overlap 1921146, overlap 1921142 1921143 1921163 GCCCGGAGTCAAAAA TTCCAGATTGGCCACGACAC CAT GCGTGGTGGCCAACGTGGCT TGCAACCAACGCCGC TERM 1262 1921182 - 1921142 - G 75 -11.1 -3.39216 | opp_overlap 1921146, overlap 1921141 1921143 1921163 CCCGGAGTCAAAAAT TCCAGATTGGCCACGACAC CAT GCGTGGTGGCCAACGTGGC TTGCAACCAACGCCG TERM 1263 1921181 - 1921143 - G 81 -14.6 -2.63208 | opp_overlap 1921146, overlap 1921142 1921141 1921163 CCGGAGTCAAAAATT CCAGATTGGCCACGACAC CAT GCGTGGTGGCCAACGTGG CTTGCAACCAACGCC TERM 1264 1921927 - 1921910 - g 70 -6.9 -4.07885 | GAGCGTCGCTGAAAA CGTGGCG TTGC CGCTACG CGCGCACACTCGGAT ttg2A 1921602 - 1922396 + | toluene tolerance protein ttg2B 1922396 - 1923145 + | toluene tolerance protein ttg2C 1923288 - 1923824 + | toluene tolerance protein ttg2D 1923821 - 1924477 + | toluene tolerance protein PD1658 1924467 - 1924772 + | hypothetical protein vacJ 1924787 - 1925839 + | lipoprotein precursor PD1660 1926292 - 1925918 - | hypothetical protein ccs50 1927900 - 1926530 - | competence-induced protein nrtD 1929586 - 1928285 - | nitrate ABC transporter ATP-binding protein TERM 1265 1928681 - 1928667 - G 75 -12.8 -2.64794 | opp_overlap 1928678 TCCAATTGCAGACTA GCCGCC AGT GGCGGC AAGTCGGCTTGACCG nrtB 1931383 - 1929629 - | ABC transporter nitrate permease TERM 1266 1930525 - 1930513 - G 70 -9.1 -3.65714 | opp_overlap 1930513, overlap 1930502 AAATCAGATCGTAAA CCCAG GAT CTGGG TATCTGACGACCAGC TERM 1267 1932087 - 1932109 + H 72 -4.8 -4.69053 | AGACTCTTTATTACG CCACATGTGT CAT ATCCGTGTGG TTTTCTTCACTCATC TERM 1268 1932826 - 1932846 + G 100 -3.9 -6.0458 | GTGTGGAACGCGGGG TGATGGCCG CTG CAGCAATCA TTTTTTTTGCTTTCT TERM 1269 1933313 - 1933336 + G 71 -7.5 -3.93963 | gap 1 GGCTAATGCTGGCAC GCTGACTGCG TTCAT CGCAGT-AGC TTTATGCCTGCTGGT yhdG 1932135 - 1933577 + | amino acid transporter PD1665 1935113 - 1933944 - | hypothetical protein TERM 1270 1934083 - 1934067 - G 74 -10.1 -3.65991 | opp_overlap 1934067 ACGGCCGGAATAGAA TGCCGCG CGA CGCAGCA TCTCTAGGAACTGCT TERM 1271 1934144 - 1934127 - G 72 -4 -4.81212 | opp_overlap 1934127 GCCAGTACAAGAAAA GGTGGC AAACAA GCCTCC CTTTTTGACTACGCC TERM 1272 1934934 - 1934924 - G 70 -6.8 -4.07568 | overlap 1934925 GGCGGGTTTCCAAAA TGCG CAC CGCA ATACGCGAATGGCCA ygjT 1935365 - 1936324 + | export protein TERM 1273 1936377 - 1936363 - T 73 -10 -3.31144 | GTTTGAGCCGTATAA GCAAGG CCC CCTTGC CAACCGAACTAATAC adr 1936803 - 1936417 - | iron-sulfur cluster insertion protein ErpA TERM 1274 1936663 - 1936681 + g 76 -10.3 -3.75053 | opp_overlap 1936662 1936661 1936666, overlap 1936666 CTGGATGTAAACACG CAACGCC AAATC GGCGTTG TTCTCTTCCTGTATC PD1668 1937302 - 1936838 - | hypothetical protein PD1669 1938011 - 1937277 - | hypothetical protein TERM 1275 1937689 - 1937670 - GR 77 -8.6 -4.07885 | opp_overlap 1937683, overlap 1937671 TAGCCGCTCGTAAAA CGCTACGT CAGC ACGTAACG CAGCAATCTGTTCGT PD1670 1938096 - 1937857 - | hypothetical protein TERM 1276 1939471 - 1939481 + G 71 -4.6 -4.63048 | GCTCTTAGCAGTGGC GCGC AAG GTGC TTTGTTCTTTATCGA PD1671 1938928 - 1940628 + | two-component, response regulator TERM 1277 1941419 - 1941435 + T 79 -10.9 -3.36515 | opp_overlap 1941416 1941417, overlap 1941417 AATTGGCGAGAACGG CACGCAT CAC ATGCGTG TGTTTCGAAGTGCAC TERM 1278 1941959 - 1941949 - T 70 -2.4 -5.00884 | overlap 1941935 ACTCCCCCCAAAAAA GGGG AGC CGCC ATGGATGGTCTAGCT bfr 1943361 - 1942897 - | bacterioferritin PD1673 1943667 - 1943443 - | bacterioferritin nudh 1944342 - 1943770 - | dinucleoside polyphosphate hydrolase metK 1945926 - 1944715 - | S-adenosylmethionine synthetase TERM 1279 1945446 - 1945460 + g 85 -2.1 -5.4477 | CCGGACGTAACCACG GCAAT AGCGA GTTGC TTTTTTTACGAATTT phoQ 1948619 - 1947171 - | two-component system, sensor protein popP 1949318 - 1948635 - | two-component system, regulatory protein PD1680 1949780 - 1949409 - | hypothetical protein TERM 1280 1949610 - 1949643 + g 86 -7.5 -4.74801 | gap 1, overlap 1949613 TCCACCAGTGGTTCT CTGCAC-CTGTCGGAT CGC ATCTGACAGAGTGTTG TTTTTACTACCATTG TERM 1281 1949613 - 1949640 + g 88 -10 -4.47707 | gap 1, overlap 1949610 ACCAGTGGTTCTCTG CAC-CTGTCGGAT CGC ATCTGACAGAGTG TTGTTTTTACTACCA PD1681 1951018 - 1950020 - | tRNA-dihydrouridine synthase A TERM 1282 1951255 - 1951233 - R 82 -13.4 -2.89534 | overlap 1951224 1951228 ACCAAGGACAGTACA GCCGTCAACC CAA GGGTGACGGC TAGTCGTGGAGATGC TERM 1283 1952480 - 1952469 - R 76 -2.2 -5.38958 | AGTCAGAAAGAAAAA GTCC AAAT GAAC TCTAAAATAATGTAG TERM 1284 1952574 - 1952551 - R 100 -12.4 -5.28166 | CAAAAGCAATAAAAA GCGGCGCCCT TTGC AGAACGCCGC TATAAAATAAACACT phuR 1954701 - 1952656 - | outer membrane hemin receptor TERM 1285 1953854 - 1953833 - G 80 -12.3 -3.45768 | TGCAATAGCAACCAA CTACCGCGG TCAC CCGCGATAG GATCACCAGGCTCAC PD1683 1954843 - 1955271 + | hypothetical protein TERM 1286 1955503 - 1955490 - g 74 -8.1 -4.03179 | CATAGTATAAGCAAA GCGTC GGTA GACGC AGCTGCTCCCCTTTC PD1684 1955406 - 1955588 + | hypothetical protein TERM 1287 1955802 - 1955826 + T 90 -14.4 -3.14132 | opp_overlap 1955796 1955795 CAGAGAAAGGCGCTG TGGATCTGGC CTATA GCCAGATCCA TTACTCAGACAACAG clpB 1958712 - 1956127 - | ATP-dependent Clp protease subunit TERM 1288 1956927 - 1956909 - G 74 -3 -4.87665 | opp_overlap 1956909 1956912, overlap 1956913 TCGGACCCAGAAAAA GGAACGAG CCG CTCGGTCG ATTTGGATCAGACAA TERM 1289 1957295 - 1957314 + g 74 -2.7 -4.95155 | GACTCCTTGATCTTA GTCGCCC CCTGTA GCGCGGC TTTTTCTGATCTCCA TERM 1290 1957733 - 1957718 - G 74 -10.4 -3.54307 | opp_overlap 1957713 AACACCTTCTGGAAA CGGCGT TCCA ACGCCG CATCCTTCTCAATGT PD1686 1959392 - 1959222 - | rubredoxin thiE 1959397 - 1960101 + | thiamine-phosphate pyrophosphorylase bioI 1960979 - 1962187 + | cytochrome P450-like enzyme yjdB 1964423 - 1962765 - | inner membrane protein PD1690 1965187 - 1964420 - | transmembrane protein TERM 1291 1965056 - 1965029 - G 71 -8.4 -3.81447 | GAGACGGTACAACAA GTCAGCTAGCGA CTGA TCGCCTGCTAAC CCCATCAACAGACCG TERM 1292 1966414 - 1966365 - R 85 -5.4 -5.43414 | gap 3, overlap 1966367 ACCACACATAAAAAA CAGCCCTTCATTG-GATCGCT-TAT TAA ATACAGCGACCACAAT-AAGGACTA TATTCACCTGTTCAT TERM 1293 1966466 - 1966454 - R 71 -7.7 -3.8594 | AACATTTAGATCAAA TTCCC ACA GGGAA CGTGGCAACACTCGA TERM 1294 1966580 - 1966551 - R 95 -13 -4.17296 | overlap 1966573 TTTCAGAGATATAAA GCAGTGCATTGA CGAAAT TCAATGCACCGC AGCAGTAGCATTAGC pilQ 1968479 - 1966569 - | fimbrial assembly protein pilP 1969009 - 1968479 - | fimbrial assembly protein pilO 1969674 - 1969006 - | fimbrial assembly membrane protein pilN 1970336 - 1969674 - | fimbrial assembly membrane protein pilM 1971412 - 1970336 - | fimbrial assembly membrane protein TERM 1295 1971516 - 1971492 - H 73 -10.1 -3.31726 | overlap 1971490 CTGCGGCACACAATA GCTTGCTATGC ATC ACATAGCAAAC AACACTGCCGTGCGT mrcA 1971568 - 1974063 + | penicillin-binding protein 1A tas 1975332 - 1974367 - | voltage-gated potassium channel beta subunit rbsK 1975835 - 1976788 + | ribokinase TERM 1296 1977770 - 1977742 - T 73 -2.5 -5.1287 | overlap 1977746 TGGATATTCAAAAAA TACATCACTCT CCGCCTC AGAGTGAAATA CGACTCAACTACAAT TERM 1297 1977892 - 1977850 - T 82 -11.5 -3.51232 | gap 1, overlap 1977847 GGTCTGTCAAAGGAA CCCCTGGATTCGCTTGCATG ACAA CA-ACAAACAAATCCAGAGG AAATCCAAACTACGG ompA 1978700 - 1977972 - | OmpA family protein PD1700 1978838 - 1979080 + | hypothetical protein dnaB 1980768 - 1979353 - | replicative DNA helicase TERM 1298 1981218 - 1981202 - R 85 -7.2 -4.99638 | AGAGGCACAGAAAAA GCCCCC GAATG GGGAGC CTACCGGACACCAAT TERM 1299 1981284 - 1981342 + r 88 -14.8 -3.05343 | opp_overlap 1981286 TGCACCACTACAATA AATCAATCCTGCCTTGGTATTGACGGTT GGA AACGATCAATACCAAGGCAGGATTAAAG TATTAACAATATCGA TERM 1300 1981340 - 1981286 - R 100 -26.2 -4.36554 | opp_overlap 1981284 CACCACTACAATAAA TCAATCCTGCCTTGGTATTGACGGTT GGA AACGATCAATACCAAGGCAGGATTAA AGTATTAACAATATC PD1702 1982637 - 1981480 - | hypothetical protein TERM 1301 1983487 - 1983471 - R 100 -15.1 -5.95166 | TGGAAGGAAAAAAAA GCCCCCG AAT CGGGGGC ATAGCGGGACATCAA PD1703 1984905 - 1983742 - | hypothetical protein cypX 1986805 - 1985606 - | cytochrome P-450 hydroxylase TERM 1302 1986450 - 1986412 - G 70 -9.1 -3.76778 | opp_overlap 1986449, overlap 1986445 1986446 1986449 AAAATTCAGTAACAA GATCGACCGATGATTTC TGCTC AAAATCATCAATCAATC GGTGCGCCGTATCGA TERM 1303 1987335 - 1987319 - R 77 -10.9 -3.12999 | overlap 1987290 1987287 CCAGGCGACACTCAA CGTTGCT AAA AGCAACG AACGTATCCTCTGGG recG 1989545 - 1987389 - | ATP-dependent DNA helicase PD1706 1989937 - 1989554 - | translation initiation inhibitor spoT 1992347 - 1990140 - | pentaphosphate guanosine-3'-pyrophosphohydrolase TERM 1304 1991803 - 1991821 + g 78 -12.4 -3.21395 | opp_overlap 1991800, overlap 1991801 CGCGCCTCAATACTC TGCGCGCC AAG GGTGCGCA TATTGTGCAAGCGAT TERM 1305 1992501 - 1992511 + H 79 -4 -5.14965 | opp_overlap 1992501, overlap 1992484 TGCATAGATAATGCA CATT TCA AATG TTTTTTCGTCACCAT TERM 1306 1992875 - 1992899 + H 75 -11.5 -3.05963 | opp_overlap 1992859 TAGTGTAACTGGACA CTGGCATCAAT CAT ATTGAAGCCAG TATTGCGATACGGAT PD1708 1993643 - 1995028 + | glycolate oxidase TERM 1307 1996443 - 1996433 - f 75 -2.6 -5.13354 | CTTATAAAAAATAAA TTTT CTA AAAA CTCAAAAACAGAATT TERM 1308 1996466 - 1996452 - f 78 -5 -4.92239 | CTAAAAACTCAAAAA CAGAAT TGG ATTCCG TCGAAATGACCACGA mopB 1996910 - 1998079 + | outer membrane protein TERM 1309 1998104 - 1998129 + F 100 -17.7 -4.07568 | opp_overlap 1998108, overlap 1998108 TAATGTGCTCCATAG CAAAGCCTGGC TTAT GCCAGGCTTTG TTTTAGAAAGAAAAA TERM 1310 1998125 - 1998108 - f 93 -12.7 -3.83026 | opp_overlap 1998104 1998108 GTGCTCCATAGCAAA GCCTGGC TTAT GCCAGGC TTTGTTTTAGAAAGA TERM 1311 1998108 - 1998125 + F 100 -12.7 -4.64861 | opp_overlap 1998108, overlap 1998104 GTGCTCCATAGCAAA GCCTGGC TTAT GCCAGGC TTTGTTTTAGAAAGA TERM 1312 1999071 - 1999081 + G 89 -3.2 -5.54907 | GTTTCAGAGCTCAAT GCTT AAC AGGC TTTTTATTTTGTACC dsbB 1999037 - 1999558 + | disulfide bond formation protein B TERM 1313 1999900 - 1999878 - T 100 -9.1 -5.252 | opp_overlap 1999878 1999878 CATCGGCACAAAAAA CCCCCAGTC TAAAT GACCGAGGG GTTTTCGGGTCTAAC PD1711 2002709 - 1999926 - | TonB-dependent receptor TERM 1314 2001447 - 2001462 + g 72 -2.6 -4.86731 | CCCCAACACAACACG CATAAA GTCA TTTGTG TTTTCTTTCACACGA PD1712 2002923 - 2003399 + | SPOUT methyltransferase superfamily protein TERM 1315 2003974 - 2003935 - f 74 -7.2 -4.20817 | gap 1 TAGAGTTGAAAATAA TTCACAGCCTACCTCCGAT GTC ATCGT-GGCAGGCAATGAA AATGAATAGGATATT TERM 1316 2003991 - 2003977 - f 72 -5.8 -4.43477 | GGCAGGCAATGAAAA TGAATA GGA TATTCA ATACATGGGGGTATC PD1713 2005093 - 2005671 + | hypothetical protein PD1714 2005731 - 2006183 + | hypothetical protein PD1715 2006317 - 2006856 + | hypothetical protein PD1716 2006879 - 2007169 + | hypothetical protein PD1717 2007295 - 2007534 + | hypothetical protein PD1718 2007769 - 2008098 + | hypothetical protein TERM 1317 2008140 - 2008125 - f 100 -11.8 -4.45168 | opp_overlap 2008125 CCTTGAAAACACAAA CCCCGC TAGC GCGGGG TTTCTCATTATTTAG TERM 1318 2008125 - 2008140 + F 95 -11.8 -4.17537 | opp_overlap 2008125 CCTTGAAAACACAAA CCCCGC TAGC GCGGGG TTTCTCATTATTTAG PD1719 2008362 - 2008895 + | hypothetical protein PD1720 2008892 - 2009263 + | hypothetical protein TERM 1319 2009302 - 2009283 - g 91 -12.1 -4.08767 | opp_overlap 2009282 CGCACCCCTCGAAAA CGCCCCC ACCCCA GGGGGCG CTAGGTTCACCAAAA PD1721 2009260 - 2009730 + | hypothetical protein PD1722 2009727 - 2010128 + | hypothetical protein PD1723 2011035 - 2011244 + | hypothetical protein PD1724 2011241 - 2012518 + | hypothetical protein TERM 1320 2012625 - 2012578 - g 71 -6.4 -4.2528 | gap 2, opp_overlap 2012590 2012591 2012595 TTTGAACCCAAGAAA GTCAATGGCGAAGGCGAGGCCG CCTTCT CGGCCT-GC-TTCCTCATCGAC CCTGCTGACCCGCAA TERM 1321 2012728 - 2012742 + G 72 -11.4 -3.09516 | opp_overlap 2012737 AAACAGATGCGTATG GGCGAC AGA GTCGCC TTGCATGATGGCGAC PD1725 2012518 - 2013084 + | hypothetical protein TERM 1322 2013126 - 2013116 - f 74 -8.2 -3.86202 | TGGCAGCACACGAAA CGGC AGG GCCG AGAAACGCGCACCCT TERM 1323 2013519 - 2013498 - g 83 -10.1 -4.11216 | GCCGCAGCTCGAAAA GCGGGCCAA CACA TTGTCCCGC TGCATCACGCGCCTT PD1726 2013171 - 2014682 + | hypothetical protein TERM 1324 2015796 - 2015816 + G 79 -12.5 -2.90075 | overlap 2015798 TGTCATGGCGCTGAC CAGCAGCGC GCT GCGCAGCTG TCTGATTGCACCAAC dpoL 2014684 - 2016864 + | phage-related DNA polymerase PD1728 2016861 - 2017139 + | hypothetical protein PD1729 2017425 - 2017141 - | hypothetical protein TERM 1325 2017359 - 2017376 + g 70 -6.9 -4.09739 | CAGCCTCTGCGTGCG CCGCAGG AACC CCTGCCG TTTTCAGCCGGTTCG PD1730 2017510 - 2018928 + | hypothetical protein PD1731 2018925 - 2019164 + | hypothetical protein TERM 1326 2020047 - 2020035 - T 81 -3.3 -5.28755 | AAACAGACGAAAAAA CACCG GCC CGTTG TTCCCATCTGTGATT uvrB 2022616 - 2020607 - | excinuclease ABC subunit B fimT 2022771 - 2023358 + | type 4 fimbrial biogenesis protein TERM 1327 2023747 - 2023720 - T 100 -10.6 -5.13741 | opp_overlap 2023718 2023740 TTAAGCCAACAAAAA CAATGCCGCAGC ATTT ACTGAGGCATTG CCATTTACATGATGA TERM 1328 2023788 - 2023778 - T 74 -6.8 -4.3586 | opp_overlap 2023776 2023778 CCAGCTAGATCAAAA CCAC CCT GTGG TCTTACTCCATCACT PD1736 2024322 - 2023816 - | hypothetical protein dapA 2025250 - 2024342 - | dihydrodipicolinate synthase gcvR 2025403 - 2025978 + | transcriptional regulator bcp 2026025 - 2026504 + | bacterioferritin comigratory protein PD1741 2028562 - 2028338 - | hypothetical protein thiL 2030237 - 2029263 - | thiamine monophosphate kinase nusB 2030801 - 2030328 - | transcription antitermination protein NusB ribH 2031262 - 2030798 - | riboflavin synthase subunit beta ribA 2032426 - 2031293 - | 3,4-dihydroxy-2-butanone 4-phosphate synthase ribC 2033025 - 2032423 - | riboflavin synthase subunit alpha ribD 2034707 - 2033613 - | riboflavin-specific deaminase PD1748 2035664 - 2035131 - | transcriptional regulator NrdR glyA 2037585 - 2036311 - | serine hydroxymethyltransferase TERM 1329 2038426 - 2038399 - g 72 -4 -4.7373 | overlap 2038403 CCACCGTACTAAAAA TCATGGCCGGTG TGGA CACCGACTTCGA AGGCGAGGCTCGCGC TERM 1330 2039243 - 2039231 - g 72 -4.1 -4.75174 | overlap 2039232 2039242 CATCGAATTCAAAAA CGTCT CCA AGACA TTCGGCGACCGCCTG TERM 1331 2039787 - 2039810 + G 75 -6 -4.56597 | gap 1 ACCCACATTCTCGCC TTCGAAG-GCG ACT CGCACGTCGAA TTTTTCCAAGGCAAC TERM 1332 2039865 - 2039853 - g 100 -6.9 -5.55695 | overlap 2039854 GAAGAAGATAAAAAA CGCCG CTT CGGCA ACGACACCGGCCCCA TERM 1333 2039864 - 2039854 - g 71 -8.2 -3.90977 | overlap 2039853 AAGAAGATAAAAAAC GCCG CTT CGGC AACGACACCGGCCCC yjjK 2038245 - 2039909 + | putative ABC transporter ATP-binding protein TERM 1334 2039953 - 2039911 - f 87 -11.3 -3.94404 | gap 1, opp_overlap 2039914 2039915 2039917, overlap 2039915 AAGCACTCAAGTAAA TACAGC-CGCGGCCTGCACA ATAC TGGGCAGGCCGCATGCCTTA TTTCAACACTAACGT TERM 1335 2039914 - 2039950 + F 74 -8.6 -3.91716 | gap 1, opp_overlap 2039911 2039915, overlap 2039915 2039917 CACTCAAGTAAATAC AGC-CGCGGCCTGCACA ATAC TGGGCAGGCCGCATGCC TTATTTCAACACTAA TERM 1336 2039949 - 2039915 - f 93 -14.3 -3.3487 | gap 1, opp_overlap 2039914 2039915 2039917, overlap 2039911 ACTCAAGTAAATACA GC-CGCGGCCTGCACA ATAC TGGGCAGGCCGCATGC CTTATTTCAACACTA TERM 1337 2039915 - 2039949 + F 78 -12.1 -2.94708 | gap 1, opp_overlap 2039915 2039911, overlap 2039914 2039917 ACTCAAGTAAATACA GC-CGCGGCCTGCACA ATAC TGGGCAGGCCGCATGC CTTATTTCAACACTA TERM 1338 2039917 - 2039946 + F 81 -13.5 -2.71101 | opp_overlap 2039915 2039911, overlap 2039915 2039914 TCAAGTAAATACAGC CGCGGCCTGCACA ATAC TGGGCAGGCCGCA TGCCTTATTTCAACA TERM 1339 2040398 - 2040381 - f 75 -6.3 -4.4078 | gap 1 GGTTTTCAACCAAAA CAGCGCAC ACC GT-CGCTG ACACGTCCCACATCT TERM 1340 2040591 - 2040572 - g 74 -7.8 -4.15396 | opp_overlap 2040572 CCCCAAAGCAAATAA CGACGCCC CAGT AGACGTCG TACTTATCGGTGGCG TERM 1341 2041038 - 2041028 - g 70 -6.8 -4.21462 | AGCGATCATCCAAAA GTGG GCG CCAC TGCTGATGGAAGGTC yojH 2040462 - 2042150 + | malate:quinone oxidoreductase TERM 1342 2042182 - 2042156 - T 100 -23.8 -4.3898 | AGCACTTTGACAAAA CGGCCCGCTGGA ATC TCCAGCGGGCCG TCTCAACATCCAGAG PD1753 2042773 - 2042315 - | hypothetical protein PD1754 2044021 - 2043239 - | hypothetical protein rluD 2045018 - 2044023 - | ribosomal large subunit pseudouridine synthase D PD1756 2045106 - 2046002 + | hypothetical protein TERM 1343 2046197 - 2046164 - T 79 -12.5 -2.85668 | overlap 2046162 CACCCGGACACGATA CCGATACCGATACCG ATAC CGATACCGATACCGG GGCATAGCACTGAAA TERM 1344 2046294 - 2046278 - T 100 -10.9 -5.00895 | overlap 2046290 TGGAGCACACAAAAA CCCCATT TAA AATGGGG AAGATCCCAACCACG PD1757 2046667 - 2046368 - | hypothetical protein feoB 2048524 - 2046671 - | ferrous iron transport protein B TERM 1345 2046965 - 2046952 - G 83 -9.5 -4.20516 | TTGCCAGTGAAGAAA CCGCG ACCT CGCGG GCAGCCAACCCGGGG PD1759 2048768 - 2048517 - | ferrous iron transport protein TERM 1346 2049394 - 2049353 - R 72 -10.2 -2.87622 | opp_overlap 2049353 2049357, overlap 2049352 2049349 CAGGGCCACAACAAC CCGGTGAATTGCGGAGCG GGGCAT CGCTCCACAATTCATTGA TTTAATTTGATATTC TERM 1347 2049353 - 2049394 + r 89 -10.9 -4.14345 | opp_overlap 2049353 2049352 2049349, overlap 2049357 CAGGGCCACAACAAC CCGGTGAATTGCGGAGCGG GGCA TCGCTCCACAATTCATTGA TTTAATTTGATATTC TERM 1348 2049357 - 2049390 + r 100 -14.7 -3.66117 | opp_overlap 2049353 2049352 2049349, overlap 2049353 GCCACAACAACCCGG TGAATTGCGGAGCGG GGCA TCGCTCCACAATTCA TTGATTTAATTTGAT PD1760 2051394 - 2049697 - | hypothetical protein TERM 1349 2050785 - 2050765 - G 70 -5.4 -4.4078 | CGGCCCTAACCAAAA GCGCACAT CACGC ACGTGCAC CCTGACCCGCGGCCA PD1761 2052740 - 2051445 - | hypothetical protein TERM 1350 2052052 - 2052036 - G 73 -9.4 -3.78934 | opp_overlap 2052017 2052044 CGCTGGTGACAACAA CGCAGC CACTT GCTGCG CCGACAAGTCTTGAA fmt 2053660 - 2052737 - | methionyl-tRNA formyltransferase def 2054278 - 2053766 - | peptide deformylase PD1764 2054393 - 2055571 + | hypothetical protein TERM 1351 2055605 - 2055640 + F 74 -5.4 -4.58663 | gap 1, opp_overlap 2055606, overlap 2055606 GCGGGTTTCCCGACA ATGATGCGCGGCGCTAT CTG AAAGCACCGC-CATCAC TTTTTGGCCCATGCT TERM 1352 2055606 - 2055639 + F 70 -8.9 -3.34716 | gap 1, opp_overlap 2055606, overlap 2055605 CGGGTTTCCCGACAA TGATGCGCGGCGCTAT CTG AAAGCACCGC-CATCA CTTTTTGGCCCATGC TERM 1353 2055639 - 2055606 - f 77 -11.1 -3.28712 | gap 1, opp_overlap 2055605 2055606 CGGGTTTCCCGACAA TGATGCGCGGCGCTAT CTG AAAGCACCGC-CATCA CTTTTTGGCCCATGC TERM 1354 2056035 - 2056057 + G 72 -11.9 -2.57404 | overlap 2056034 TTGCCATCGTCGGCA GCCGCCAGC CCAGT GCCGGCGGC CTTGATCATTCCTAT smf 2055662 - 2056807 + | DNA processing chain A PD1766 2056853 - 2057326 + | hypothetical protein TERM 1355 2060074 - 2060047 - g 70 -5.5 -4.52857 | gap 1, overlap 2060048 2060051 ATTCCCTAGATAAAA CCGACGCTGGCA GCGTG CGCCTGC-TCGG CATTGACCCCACCAG topA 2058300 - 2060747 + | DNA topoisomerase III PD1768 2060862 - 2061425 + | hypothetical protein lpxA 2062434 - 2061790 - | acyl-[ACP]-UDP-N-acetylglucosamine PD1770 2062805 - 2062431 - | hypothetical protein TERM 1356 2063093 - 2063081 - R 76 -9.1 -3.72893 | CAGTGTCGGATCAAA CCGCT CAC AGCGG TAACGGAATTAAAGA PD1771 2063935 - 2063510 - | hypothetical protein TERM 1357 2063803 - 2063815 + g 74 -4.8 -4.74103 | opp_overlap 2063795 2063794 GGGAAACGCCCGAGA GAGC AGCCA GCTC TTTTTGACTTAAACG PD1772 2064941 - 2064156 - | tropinone reductase sspB 2065392 - 2064952 - | ClpXP protease specificity-enhancing factor sspA 2066058 - 2065423 - | stringent starvation protein A petC 2066961 - 2066200 - | ubiquinol cytochrome C oxidoreductase, cytochrome C1 subunit petB 2068216 - 2066954 - | ubiquinol cytochrome C oxidoreductase, cytochrome B subunit petA 2068853 - 2068221 - | ubiquinol cytochrome C oxidoreductase, iron-sulfur subunit yjbJ 2069884 - 2068991 - | soluble lytic murein transglycosylase precursor PD1779 2070033 - 2071526 + | hypothetical protein PD1780 2071791 - 2072774 + | ATP binding protein PD1781 2072845 - 2073330 + | putative metalloprotease PD1782 2073330 - 2073854 + | hypothetical protein corC 2073863 - 2074834 + | magnesium and cobalt efflux protein PD1784 2074954 - 2076054 + | hypothetical protein corA 2076051 - 2077064 + | magnesium and cobalt transport protein PD1786 2077444 - 2077797 + | hypothetical protein PD1787 2078632 - 2078045 - | hypothetical protein TERM 1358 2078199 - 2078232 + g 73 -5.9 -4.46854 | gap 1, opp_overlap 2078204, overlap 2078199 ACCCCGATCTTGGCA CC-CAAGCTGGCGCTG CGG TGGCGCTGGCTGGAGG TTTGTTCTTGGGTGC TERM 1359 2078310 - 2078343 + g 72 -3.7 -4.80882 | overlap 2078312 TTGTGGCTGCTGAAC TGGGCGGCGGTGGCA TTGA TGTTGCCGGTGCCTG TTTTTAGTGTGGGCT PD1788 2079532 - 2078687 - | hypothetical protein TERM 1360 2079399 - 2079375 - G 77 -3.5 -5.0133 | overlap 2079380 TATTGGCCGAAAAAA TCCAACTGGAA ATA TTCCAGGCTGA GGTCGCGGTTCTCCC TERM 1361 2079533 - 2079544 + r 78 -5.8 -4.73677 | AAGACGGACGTGCAT GGAG AAGG CTCC TTTATTTCTTCTGGA PD1789 2080394 - 2079546 - | hypothetical protein PD1790 2081285 - 2080407 - | hypothetical protein TERM 1362 2080726 - 2080741 + g 72 -11.8 -2.62263 | overlap 2080736 GAGTCGCTACCCAGG GCGGCG GTGC CGCCGC TGCTGTGCACGGAGT PD1791 2082130 - 2081282 - | hypothetical protein pspA 2092276 - 2082143 - | hemagglutinin-like protein TERM 1363 2082462 - 2082477 + g 72 -11.8 -2.62263 | overlap 2082449 GAGTCGCTGCCCAGG GCGGCG GTGC CGCCGC TGCTGTGCACGGAGT TERM 1364 2082584 - 2082598 + g 79 -2.8 -5.14563 | opp_overlap 2082569, overlap 2082572 2082569 GTCCTTGGGCGGGGC CCAG GTCTTGA CTGG TTTTTTCGTCACCAG TERM 1365 2084082 - 2084109 + g 72 -12 -2.63631 | TGGCGTTGCTGGGCG CTGGCCTGCAGG GTGT CTTGCAGGCTGG TGATGTCCAGGTTGC TERM 1366 2085315 - 2085349 + g 76 -10.7 -3.73647 | gap 1 CTGTGGCTGCTGCTG GAGCGGAGCAGGCCGC TGCG GCGG-CTGGTGCGCTC TTGTTGGTCACTGAG TERM 1367 2086102 - 2086118 + g 78 -6.5 -4.63218 | CGCGGGTGGTGGTGC CGTCCGG CAG TTGGACG TTTTGTTGGACGAGC TERM 1368 2088349 - 2088371 + g 76 -12 -3.15544 | CCTGGGCGGTCAGGT CAGGGGCTTG GAG CAAGCCGCTG TTGGTGAGGGTGCCG mtfA 2095055 - 2092473 - | mannosyltransferase TERM 1369 2092539 - 2092514 - G 85 -8.9 -4.4959 | opp_overlap 2092513 TGGAATCAAGCAAAA GGCGGCAATCG TTCA CGATATCCGCC AGTTGTTGAGCGCTT TERM 1370 2092718 - 2092736 + g 95 -14.6 -3.29144 | opp_overlap 2092715 2092716 GTCTGGCCAGAATGG GCAGCCCA AAA TGGGCTGC TTCTAACAACGGTAA TERM 1371 2094077 - 2094063 - G 70 -10 -3.34043 | CGCATCACTGCACAA TGTGGG TGC CCCACA GGCCATCGCCTCCAA PD1794 2095282 - 2095052 - | hypothetical protein PD1795 2096428 - 2095304 - | sugar transferase ponB 2096682 - 2099108 + | penicillin-binding protein 1B TERM 1372 2099478 - 2099460 - g 77 -11 -3.54307 | overlap 2099449 AAGAGCGCGCTGAAA TCGCCCTG CTG CAGAGCGA CTGGACCGGTGCCGA PD1797 2099105 - 2099662 + | hypothetical protein TERM 1373 2100904 - 2100871 - g 83 -10.3 -3.92832 | gap 1, opp_overlap 2100870, overlap 2100872 AAACGGCCGAAACAA GCG-GGTTAGAGGGGG ATA CCCCCTCTAACAACGA CGTCCTCTGGTACGA TERM 1374 2100903 - 2100872 - g 81 -13.8 -2.94976 | gap 1, opp_overlap 2100870, overlap 2100871 AACGGCCGAAACAAG CG-GGTTAGAGGGGG ATA CCCCCTCTAACAACG ACGTCCTCTGGTACG yoaA 2099787 - 2101808 + | ATP-dependent helicase PD1799 2102660 - 2102052 - | peptidase yadF 2103400 - 2102738 - | carbonic anhydrase rfbU 2104647 - 2103535 - | lipopolysaccharide biosynthesis protein PD1802 2105363 - 2104644 - | hypothetical protein TERM 1375 2104795 - 2104757 - G 81 -13.1 -3.01712 | gap 1, overlap 2104741 GTTGGCCGGGGAAGA CGCGGCCACGCCGCGTCG TGGT CGCCGCAGCATAGCCG-G CATCACAGACTGCAT PD1803 2105723 - 2105409 - | hypothetical protein TERM 1376 2107179 - 2107146 - g 70 -8.7 -3.6393 | overlap 2107144 CGGAGGACAGAAACA GCGCGTTGGCATCGC GCGT GCGCTGGCGACACGC CCGCAGATCCTGCTA TERM 1377 2107634 - 2107671 + G 100 -24.3 -3.78775 | gap 1, opp_overlap 2107628 GACAATTGACTGTCG CGCTGTCTG-GCGGCGAC CCA GTCGCCGCACAGGCAGCG TTTGCTGCTGCCGGC yusC 2106706 - 2107713 + | ABC transporter ATP-binding protein yecS 2107710 - 2108417 + | ABC transporter permease protein PD1806 2108511 - 2109296 + | membrane protein TERM 1378 2109330 - 2109359 + T 93 -12.1 -3.69332 | opp_overlap 2109334, overlap 2109334 GGACATTTACAAACA AGAAGACGGGCCC TGGT GGGCCCGTCTTGG TTTACGCTGTTATTG TERM 1379 2109355 - 2109334 - T 100 -17.3 -4.16305 | opp_overlap 2109334 2109330 ATTTACAAACAAGAA GACGGGCCC TGGT GGGCCCGTC TTGGTTTACGCTGTT TERM 1380 2109334 - 2109355 + T 100 -17.3 -3.54146 | opp_overlap 2109334, overlap 2109330 ATTTACAAACAAGAA GACGGGCCC TGGT GGGCCCGTC TTGGTTTACGCTGTT ompW 2110048 - 2109392 - | outer membrane protein TERM 1381 2109513 - 2109501 - G 70 -9.1 -3.68351 | TTGCTATTACTGAAA CGCGT ATA ACGCG CATCAAGACGAGCAA PD1808 2110293 - 2110069 - | hypothetical protein TERM 1382 2110662 - 2110641 - H 85 -3.7 -5.56112 | ATAAAAATCAAAAAA CAGAAAAAG CAAC CGCTTTCTG CAACCCTGCCCCTAA pdhB 2110946 - 2112601 + | dihydrolipoamide acetyltransferase TERM 1383 2113699 - 2113679 - g 78 -2.6 -5.15634 | gap 1 GACCGCATGAAAAAA CAGG-GCAT TGAA ATACACCTG AACACCAAAGCAAGC lpdA 2112647 - 2114458 + | dihydrolipoamide dehydrogenase TERM 1384 2114908 - 2114892 - T 75 -10.1 -3.53761 | overlap 2114881 2114896 TAAGGTGCCGGTAAA GGCACTG CTC CAGCGCC CCGCGGGTAGAGCGG czcD 2116125 - 2115202 - | cobalt-zinc-cadmium resistance protein metB 2117736 - 2116534 - | cystathionine gamma-synthase TERM 1385 2117224 - 2117210 - G 79 -11.4 -3.727 | TCGACCACAGTCAAA GCACCG ACA CGGTGC GCTGCCTCAATCACC met2 2118770 - 2117733 - | homoserine O-acetyltransferase PD1814 2119080 - 2119952 + | peptidase PD1815 2120393 - 2120169 - | hypothetical protein PD1816 2120789 - 2121328 + | hypothetical protein surE 2121589 - 2122377 + | stationary phase survival protein SurE pcm 2122374 - 2123051 + | L-isoaspartate O-methyltransferase PD1819 2123071 - 2123688 + | lipoprotein nlpD 2123688 - 2124422 + | lipoprotein phs 2127103 - 2125604 - | histidine kinase/response regulator hybrid protein TERM 1386 2127634 - 2127620 - R 80 -5.7 -5.02287 | TAGAAAAACACAAAA CTGCT CCACT AGCAG CACCCCAGCCCTCAC alr 2128743 - 2127646 - | alanine racemase dadA 2130020 - 2128713 - | D-amino acid dehydrogenase small subunit TERM 1387 2128913 - 2128903 - GH 81 -6.8 -4.70887 | GTATTAAGAAACAAA CCCT GAT AGGG CGTCGCACCGATCAC TERM 1388 2129917 - 2129902 - GH 70 -9 -3.31792 | CCACCATTGGCATAA CTGGTC TCCA GACCAG CACCAGACTGACGAT PD1825 2130409 - 2130876 + | methionine sulfoxide reductase B PD1826 2131060 - 2132115 + | hypothetical protein nahA 2132191 - 2134629 + | beta-hexosaminidase precursor TERM 1389 2134823 - 2134810 - g 71 -4.5 -4.56597 | CCCTCCCCTTAAAAA CAACC ACCT GGCTG CCCGCACACGTCCCC PD1828 2134644 - 2137319 + | beta-mannosidase precursor TERM 1390 2138701 - 2138685 - g 73 -10.8 -3.37796 | GTCCACTATGCACAA GGCGCC TCCCT GGCGCC CGGCGTCCCAAACAC xylA 2137392 - 2140040 + | family 3 glycoside hydrolase PD1831 2140413 - 2140132 - | hypothetical protein TERM 1391 2142908 - 2142924 + G 80 -4.3 -5.0133 | opp_overlap 2142908, overlap 2142910 GATCGCAACCGACAA TCCGGCG CAA CGTCGCA TTTTTTACACCAGTC PD1832 2141907 - 2144279 + | antigen TERM 1392 2145574 - 2145595 + G 70 -5.1 -4.51196 | gap 1 CTGGTCTCCAGCCGC CGCCTTTGCC AGC GGCAA-GCCG TTTTATCGATTTGCC bga 2144499 - 2146337 + | beta-galactosidase pdxA 2147696 - 2146704 - | 4-hydroxythreonine-4-phosphate dehydrogenase surA 2149091 - 2147700 - | peptidyl-prolyl cis-trans isomerase TERM 1393 2148305 - 2148286 - G 77 -8.6 -4.17023 | gap 1, overlap 2148287 TTAAGCAGCTGAAAA CCGCTG-GT GCC ACGCAGCGG ACCAACGATCTGGCC imp 2151466 - 2149088 - | organic solvent tolerance protein TERM 1394 2151377 - 2151391 + g 70 -2.7 -4.8048 | opp_overlap 2151377 CGTCGCGGGGCACAA CCCCC AATTA GGCGG TTTTTCGTCTGCCAA ubiH 2151960 - 2153168 + | 2-octaprenyl-6-methoxyphenyl hydroxylase ubiF 2153165 - 2154346 + | 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase cysB 2155686 - 2154703 - | transcriptional regulator CysB-like protein TERM 1395 2154812 - 2154782 - G 76 -12.7 -2.81464 | gap 1, overlap 2154794 TGACCATTGAGCACA CGCCGCAAATC-AC GCTT GTCGATCTGCGGCG CAAGCGCATGCACCA cysG 2155838 - 2157274 + | siroheme synthase TERM 1396 2158004 - 2158030 + G 71 -10.2 -3.17075 | TCAGGGATGGACACC CGATTTCGTACC GGA GGTACTGAATCG TTCCGTTCCACACCA cysK 2157333 - 2158292 + | cysteine synthase TERM 1397 2158751 - 2158773 + G 95 -14.2 -3.62597 | opp_overlap 2158722, overlap 2158752 CCCTATGGGTGCGGA TGCCGCCAAT CCC ATTGGCGGCG TTGTTACAACATAGG TERM 1398 2158752 - 2158772 + G 86 -15.5 -2.77344 | opp_overlap 2158722, overlap 2158751 CCTATGGGTGCGGAT GCCGCCAAT CCC ATTGGCGGC GTTGTTACAACATAG PD1842 2158303 - 2158935 + | hypothetical protein PD1843 2159629 - 2159048 - | hypothetical protein PD1844 2159828 - 2161099 + | hypothetical protein TERM 1399 2161294 - 2161265 - T 73 -10 -3.32233 | overlap 2161268 GAAGCATCAAACATA GAAGGCACCAGC ATCACA GCCAGCGCCTTC GCCACAATGAGCAAA fbaB 2162319 - 2161315 - | fructose-bisphosphate aldolase pykA 2164634 - 2163168 - | pyruvate kinase pgk 2166226 - 2165051 - | phosphoglycerate kinase gltX 2166835 - 2168238 + | glutamyl-tRNA synthetase TERM 1400 2168470 - 2168496 + G 79 -7.3 -4.46212 | gap 1 TGTCGGCGCCGATGC TCCA-CCCACGG TCTA CCGTGCGCTGGA TTTTCTGATGACCCA zur 2168255 - 2168764 + | FUR family transcriptional regulator PD1850 2170601 - 2168943 - | M20/M25/M40 family peptidase engXCA 2170902 - 2172746 + | endo-1,4-beta-glucanase PD1852 2173093 - 2172866 - | hypothetical protein TERM 1401 2175205 - 2175193 - g 71 -4.7 -4.66537 | overlap 2175194 TTGCGCAAGAGAAAA CCCAG CCG CAGGG ACTGGCTCTACGCAT PD1853 2173239 - 2176133 + | zinc protease PD1854 2177528 - 2176863 - | hypothetical protein TERM 1402 2177607 - 2177575 - H 73 -10 -3.4619 | overlap 2177573 ATGGACAATACAATA TGGAAACGATTCAG CTGAT CAAAATCGTTTCCA CCGCCACAGGTATAT PD1855 2177833 - 2178693 + | hypothetical protein engXCA 2180680 - 2178971 - | extracellular endoglucanase precursor TERM 1403 2179383 - 2179353 - G 70 -9.9 -3.35046 | overlap 2179351 2179358 GCATTCGGCGAAAGA TCTAATCCC-CCGGA AGA TCCGGTGGGA-TAGA GGTCCGTCACGTAGA TERM 1404 2179379 - 2179358 - G 71 -10.9 -3.24021 | gap 1, overlap 2179353 2179351 CGGCGAAAGATCTAA TCCC-CCGGA AGA TCCGGTGGGA TAGAGGTCCGTCACG TERM 1405 2179864 - 2179893 + g 71 -4.9 -4.64861 | opp_overlap 2179841 CGAGCTGCTCGGCAT CCGTGGCATCCAG AGAG TTGGGTAACACGG TTTGTTTTCCAGAAA secA 2184102 - 2181358 - | preprotein translocase subunit SecA TERM 1406 2182941 - 2182956 + g 85 -4.7 -5.28176 | CTGTGTCCGCAGTCC CTGTC ATACCG GACAG TTTTTTATAGATACG TERM 1407 2184197 - 2184179 - R 95 -12.4 -4.30844 | opp_overlap 2184179 ACGCCATCAGCAAAA CAGGGCGC ACC GCACCCTG TTCGTAGTCAAGCTA TERM 1408 2184179 - 2184197 + r 74 -10.2 -3.21416 | opp_overlap 2184179 ACGCCATCAGCAAAA CAGGGCGC ACC GCACCCTG TTCGTAGTCAAGCTA PD1858 2185212 - 2184253 - | peptidase TERM 1409 2185402 - 2185373 - g 73 -9.3 -3.86897 | CCCATCTGCCAGAAA CGCTGGCAAATCA ATGC CGATTGGCCAACG TCAATGGTAAAAAAC PD1859 2185225 - 2185665 + | hypothetical protein lpxC 2186739 - 2185825 - | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase ftsZ 2188346 - 2187111 - | cell division protein FtsZ ftsA 2189757 - 2188522 - | cell division protein TERM 1410 2188606 - 2188565 - G 86 -6.6 -5.01732 | opp_overlap 2188566, overlap 2188566 2188591 AACTTCTTGAAAAAA GCACCCAC-TCGCCCAGTCG GTAA CGA-TGGACGACGCGGGCGT TCCATCTGACTGCCC TERM 1411 2188605 - 2188566 - G 71 -10.1 -3.60316 | opp_overlap 2188566, overlap 2188565 2188591 ACTTCTTGAAAAAAG CACCCAC-TCGCCCAGTCG GTAA CGA-TGGACGACGCGGGCG TTCCATCTGACTGCC ftsQ 2190590 - 2189754 - | cell division protein ddl 2191611 - 2190697 - | D-alanine--D-alanine ligase TERM 1412 2190836 - 2190823 - G 86 -3.7 -5.29445 | TTCCAATAAGAAAAA GCGCC CACT GCCGC GCTCGCGCATCACAT murC 2193095 - 2191662 - | UDP-N-acetylmuramate--L-alanine ligase murG 2194245 - 2193151 - | N-acetylglucosaminyl transferase ftsW 2195522 - 2194251 - | cell division protein TERM 1413 2195389 - 2195379 - G 85 -6.8 -4.86822 | AATCAGATAATAAAA CGGA CTA TCCG TCAGCTCGATCGAAC mraY 2196607 - 2195522 - | phospho-N-acetylmuramoyl-pentapeptide-transferase murF 2198003 - 2196597 - | UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase murE 2199487 - 2198000 - | UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase ftsI 2201325 - 2199484 - | penicillin-binding protein 3 ftsL 2201585 - 2201322 - | cell division protein mraW 2202550 - 2201582 - | S-adenosyl-methyltransferase MraW TERM 1414 2201928 - 2201916 - G 80 -9.1 -4.08767 | opp_overlap 2201923 CGGATTCCCTGAAAA CTGCG CGT CGCAG GATGAATCCTGGATT PD1874 2203025 - 2202579 - | cell division protein MraZ sac1 2206239 - 2204377 - | sulfur deprivation response regulator trmB 2207004 - 2206273 - | tRNA (guanine-N(7))-methyltransferase thiG 2207831 - 2207004 - | thiazole synthase PD1878 2208047 - 2207847 - | sulfur carrier protein ThiS TERM 1415 2209661 - 2209641 - g 72 -4 -4.70169 | gap 2, opp_overlap 2209642 2209643, overlap 2209636 2209642 2209643 CTACACCGAACAAAA CGCCAGCAGC ACC GC-GCTGG-G TTATGCCGATCAGCA TERM 1416 2209800 - 2209785 - g 80 -4.6 -5.08731 | overlap 2209789 2209794 CAAGAAACAACAAAA CCAAGC CAAT GCATGG CTGCAAACCATGCCA estA 2208190 - 2209983 + | lipase/esterase PD1881 2210792 - 2210355 - | phosphotransferase TERM 1417 2210671 - 2210617 - GT 83 -10.1 -4.07868 | gap 2, overlap 2210644 2210645 CCATACTCACACAAA TGCACCGCG-TGCAACCC-TCCATCAC AAC GCAGTGGATGGACCACATCGCGGTGCA TGTCACTACACAGCA actII 2213163 - 2210767 - | membrane protein TERM 1418 2211948 - 2211913 - GR 73 -9.6 -3.31144 | gap 1 GGTCCACTGCCATAA CCGCGCGAGCACGACCG AAT CGG-CAGGATCACGCGG CGCAGGATCAATCAA acs 2213956 - 2213309 - | fatty acyl-CoA synthetase PD1884 2214860 - 2213880 - | acyltransferase TERM 1419 2214723 - 2214703 - GR 72 -8.2 -3.71751 | overlap 2214694 2214696 AGATAACACACAGAA GCGCGACG TTCCG CGCCACGC ACCACAAGAAAGTAC PD1885 2215144 - 2214857 - | dehydratase PD1886 2216128 - 2215388 - | hypothetical protein acpP 2216372 - 2216103 - | acyl carrier protein PD1888 2216399 - 2216770 + | hypothetical protein fkbO 2216826 - 2217716 + | pteridine-dependent deoxygenase TERM 1420 2218314 - 2218270 - g 74 -7.7 -4.11664 | gap 1, overlap 2218273 CGGAGAAGAACCAAA CCAGCCCGGCAACGACGCCG AGCAAG CGGCGGCAC-GTCGCGCTGG ACTTGCCTACAATTT PD1890 2218142 - 2219437 + | hypothetical protein hlyU 2219431 - 2219775 + | ArsR family transcriptional regulator PD1892 2219772 - 2220179 + | hypothetical protein PD1893 2220176 - 2220622 + | hypothetical protein scf56 2220619 - 2221404 + | membrane protein dcd 2221978 - 2222553 + | deoxycytidine triphosphate deaminase PD1896 2223742 - 2222825 - | hypothetical protein mutL 2225652 - 2223787 - | DNA mismatch repair protein TERM 1421 2224354 - 2224332 - G 70 -7.1 -4.21811 | gap 1 CAGCCAAGATATAAA TGCCAT-GCA GCTG TGCGATGGCA TAGCCAAGTAGCGGT TERM 1422 2225798 - 2225767 - R 71 -7.3 -4.02253 | CTAAGAATCGACAAA TCACCATCAAGCA ACTTAA TGCGTGCTGGTGA TCACCGAGCCACCAG TERM 1423 2225801 - 2225829 + r 71 -9.6 -3.28712 | gap 1, overlap 2225802 TGCGTGCTGGTGATC ACCGAGCCA-CCA GTCG TGGCTGGCTCGGC TTGTGCGCGCAAGGC TERM 1424 2225802 - 2225828 + r 80 -13.1 -2.57132 | gap 1, overlap 2225801 GCGTGCTGGTGATCA CCGAGCCA-CCA GTCG TGGCTGGCTCGG CTTGTGCGCGCAAGG amiC 2227404 - 2225782 - | N-acetylmuramoyl-L-alanine amidase precursor PD1899 2227951 - 2227463 - | hypothetical protein PD1900 2229438 - 2227948 - | hypothetical protein TERM 1425 2228280 - 2228252 - G 71 -5.8 -4.33675 | overlap 2228243 ACCACAGCAGCAAAA CGCGCCGCCAAG GCCTG CGCAGCTGCGCG ACGATCCGCCTGCAC TERM 1426 2230829 - 2230847 + G 71 -9.6 -3.53012 | AGCACTTAGGCCAGT TGCAGCAG CGC TTGCTGCA TTTGCAGCAACACCG xseA 2230006 - 2231340 + | exodeoxyribonuclease VII large subunit acvB 2232268 - 2231381 - | virulence protein TERM 1427 2231761 - 2231733 - G 74 -2.3 -5.06016 | overlap 2231734 2231737 2231738 AGCAGAGAAATAAAA TCAACGTCGTTGC GCT GCATCGGCATCAA GTGAGCATAGGCAAA PD1903 2234019 - 2232409 - | hypothetical protein TERM 1428 2232507 - 2232547 + g 83 -12.7 -3.28712 | gap 2, opp_overlap 2232530 2232531 GCTGTGGTGAGTTGG CCCA-GCTGCCGCCA-CGT ACCAA ACGCTGACGGCAGCCTGGG TTGTACCAGGCGACA TERM 1429 2232728 - 2232712 - G 76 -8.7 -4.00066 | CCCATAACCGATAAA GGCATTG GCC CAACGCC GTCCACTCGGAGAGA TERM 1430 2233413 - 2233445 + g 95 -7 -5.36441 | gap 1, opp_overlap 2233413 TCTTTGGGTCAGAAA TTGCACGCAATACGG CATC CCGCAATGCG-GCAA TTTTTTCTATACGCA TERM 1431 2233445 - 2233413 - G 73 -9.2 -3.85698 | gap 1, opp_overlap 2233413 TCTTTGGGTCAGAAA TTGCACGCAATACGG CATC CCGCAATGCG-GCAA TTTTTTCTATACGCA rnd 2234334 - 2235422 + | ribonuclease D TERM 1432 2236036 - 2236011 - g 77 -8.3 -4.09685 | GCGGACGCGGGAAAA TACCCAAGCCT TTCG AGGCGTGGATA GGCACTGCCGCTTAT xrvA 2235701 - 2236105 + | virulence regulator TERM 1433 2236201 - 2236219 + T 72 -3.1 -5.09259 | gap 1, overlap 2236205 GTAGATAAGTCTTGT GCAAGCGT TGCA GCGC-TGC TTTTCTTTTGAAATG PD1906 2237946 - 2236891 - | putative RNA 2'-O-ribose methyltransferase PD1907 2238094 - 2238690 + | hypothetical protein PD1909 2240055 - 2239693 - | transcription regulator protein ihfA 2240329 - 2240030 - | integration host factor subunit alpha pheT 2242732 - 2240354 - | phenylalanyl-tRNA synthetase subunit beta TERM 1434 2240473 - 2240491 + g 84 -13.2 -3.07994 | opp_overlap 2240472 2240470 2240473 AAATCAAGCCAATAG CCAGGCTT TTA AAGCCTGG TTCGATACCCTTACC TERM 1435 2240491 - 2240473 - G 78 -13.2 -2.508 | opp_overlap 2240473, overlap 2240472 2240470 AAATCAAGCCAATAG CCAGGCTT TTA AAGCCTGG TTCGATACCCTTACC TERM 1436 2241495 - 2241453 - G 79 -11.2 -3.63922 | overlap 2241451 AGGGCCTGCAAAATA CGCTCTACCTCGGCATCATC AAT GACAATGCCAAGGAGGCGCG CGATACGTGTGCGAC pheS 2243817 - 2242816 - | phenylalanyl-tRNA synthetase subunit alpha TERM 1437 2243628 - 2243602 - G 83 -13 -3.18264 | opp_overlap 2243597, overlap 2243603 TTTGCGATCCATTAA TGCGTCCGAGAT AAG ATCCCGGACGCG GTTGAGCTTTTCGCC TERM 1438 2243627 - 2243603 - G 89 -16.5 -2.50816 | opp_overlap 2243597, overlap 2243602 TTGCGATCCATTAAT GCGTCCGAGAT AAG ATCCCGGACGC GGTTGAGCTTTTCGC rplT 2244471 - 2244112 - | 50S ribosomal protein L20 rpmI 2244679 - 2244482 - | 50S ribosomal protein L35 TERM 1439 2244800 - 2244779 - R 79 -9.5 -3.74251 | overlap 2244798 TAGACTGCTAGTAAA TCCTTGACT TAAA AGCCAAGGA GGGTCCCCAACTTCA TERM 1440 2244882 - 2244870 - R 72 -4.9 -4.57353 | overlap 2244865 TGCCAGGAGACAAAA CATTT TGT AAATG AGATGCTTCGGTACA infC 2245389 - 2244925 - | translation initiation factor IF-3 thrS 2247427 - 2245520 - | threonyl-tRNA synthetase TERM 1441 2247606 - 2247592 - H 100 -4.9 -5.87996 | opp_overlap 2247592 GAAGCAACAAAAAAA GCGCC GTCAG GGCAC CTTGCTCATTCACCA TERM 1442 2247921 - 2247886 - H 73 -2 -5.10497 | gap 1, overlap 2247891 2247895 2247897 AATTTAGCCAAAAAA TTTAAGCAA-CACCATT TCA AATGGAGCTTCCCTAAA AAGAATCACAAGCAG PD1917 2248322 - 2248600 + | hypothetical protein TERM 1443 2249679 - 2249700 + F 72 -6.5 -4.30014 | overlap 2249680 CGTTGCATCTTTCCA TGCTCCACC GCTA GGTAGAGCG TTTTGCATTCATAAC rimK 2249743 - 2250648 + | ribosomal protein S6 modification protein TERM 1444 2250871 - 2250839 - f 74 -10.5 -3.17763 | overlap 2250848 2250857 TCCACACCGCAGTAA CCGCAGTAACCGCAG TAA CCGCAGTAACCGCAG TAGAGGATTACGCAG colR 2251333 - 2252010 + | two-component system, regulatory protein colS 2252003 - 2253340 + | two-component system, sensor protein coaE 2254245 - 2253607 - | dephospho-CoA kinase TERM 1445 2253651 - 2253638 - G 70 -9.5 -3.3672 | overlap 2253636 2253632 AAAACAGAAGCAAGA GCGCG ATAG CGCGC GTCCAAATTGCATAC pilD 2255105 - 2254242 - | pre-pilin leader peptidase TERM 1446 2254968 - 2254980 + g 71 -10.5 -3.19246 | CATTTCCAGGATTTC GCGCG CAT CGCGC TTCCATTGCCATTCC pilC 2256314 - 2255112 - | fimbrial assembly protein pilA 2256755 - 2257201 + | fimbrial protein TERM 1447 2257289 - 2257271 - T 86 -13.1 -3.29829 | opp_overlap 2257263 2257270 2257269 TAGATCCGGTGAGAA GCCCGCC TTGAT GGCGGGC GCTTTGATAATATTA TERM 1448 2257444 - 2257430 - T 75 -2.8 -5.19212 | ACTATTATTAAAAAA TCGATA AAG CACCGA TTTTAATATAAAAAC PD1925 2257674 - 2257447 - | hypothetical protein TERM 1449 2257518 - 2257508 - G 78 -2.6 -5.2189 | TTAATCATTAAAAAA TATT TAC AATA ATCCCCCTGACTTTC TERM 1450 2258873 - 2258826 - g 80 -9.2 -4.0802 | gap 1, overlap 2258829 AGGTCAACAATCAAA CTATCACCTTGACCCGCATCGCT GAT AACAACGCAGGCCAAGGTGGC-G TCAATACTGGGGGGA TERM 1451 2258871 - 2258829 - g 91 -14.2 -3.07051 | overlap 2258826 TCAACAATCAAACTA TCACCTTGACCCGCATCGCT GAT AACAACGCAGGCCAAGGTGG CGTCAATACTGGGGG PD1926 2258510 - 2258950 + | fimbrial protein TERM 1452 2259020 - 2259044 + F 100 -20.1 -3.19389 | opp_overlap 2259020 2259023, overlap 2259023 ATCGGTGTCAAGTAA GAAGCCCGCCA TCA TGGCGGGCTTC TTGGTCAATACGTTA TERM 1453 2259044 - 2259020 - f 100 -20.1 -3.33815 | opp_overlap 2259020 2259023, overlap 2259023 ATCGGTGTCAAGTAA GAAGCCCGCCA TCA TGGCGGGCTTC TTGGTCAATACGTTA TERM 1454 2259041 - 2259023 - f 100 -16 -3.81146 | opp_overlap 2259020 2259023, overlap 2259020 GGTGTCAAGTAAGAA GCCCGCCA TCA TGGCGGGC TTCTTGGTCAATACG TERM 1455 2259023 - 2259041 + F 100 -16 -3.73647 | opp_overlap 2259023 2259020, overlap 2259020 GGTGTCAAGTAAGAA GCCCGCCA TCA TGGCGGGC TTCTTGGTCAATACG TERM 1456 2259980 - 2259967 - g 74 -6.7 -4.26903 | GTGAGTGCAGCAAAA TTGGC CGCG GCCAA TGCACTTGAGTTCGG TERM 1457 2260188 - 2260165 - g 73 -9 -3.86202 | gap 1 CTGGACGACATCAAA TTCCAC-ACCA ATC TGGTCGTGGAA CCGATTCTGGTCGAC pilB 2259793 - 2261526 + | pilus biogenesis protein TERM 1458 2261622 - 2261576 - T 73 -11.1 -2.66634 | gap 1, opp_overlap 2261593, overlap 2261585 2261588 2261592 2261593 CACGTCATGACACCA TGCTGAGAAGAAGCAAGGCA GGCTATGT TGCC-TGCTTCCTCTCATCA CTCCATACCCAGCTT pilR 2263032 - 2261620 - | two-component system, regulatory protein pilS 2264828 - 2263218 - | two-component system, sensor protein TERM 1459 2263400 - 2263388 - G 73 -5.5 -4.67168 | overlap 2263397 2263399 AAAAAGGCTGAAAAA GCTGC AAA ACAGC CGCATCGGGTATACC TERM 1460 2264969 - 2264955 - H 73 -2.1 -5.15167 | GACTATGAATAAAAA CACAA TAATT TTGCG CTCCATCATCATAGT sucC 2265083 - 2266246 + | succinyl-CoA synthetase subunit beta TERM 1461 2266233 - 2266223 - f 70 -2.4 -5.0133 | overlap 2266210 GACGGCGCCAAAAAA GCCG TGG CCGC TGTCACCGTCTGAAC TERM 1462 2266313 - 2266298 - g 76 -3.3 -5.06816 | ACTGGTTAATAAAAA TACGA AGGTGA TCGTA CAAGGCTTCACCGGT sucD 2266275 - 2267147 + | succinyl-CoA synthetase subunit alpha TERM 1463 2267163 - 2267150 - f 72 -8.1 -3.68024 | GCTCGTAAGATAGAA CCCTC AAGT GAGGG CATATGATGCGTTGT TERM 1464 2267291 - 2267258 - f 95 -11.8 -4.22591 | opp_overlap 2267258 2267261, overlap 2267261 AATAACCTCAATAAA TAACGATGCCTCCA GAAACA CGGAGGCATCGTTG TTCATATCGTTGGCT TERM 1465 2267258 - 2267291 + F 86 -13.3 -3.32914 | opp_overlap 2267258 2267261, overlap 2267261 AATAACCTCAATAAA TAACGATGCCTCC AGAAACAC GGAGGCATCGTTG TTCATATCGTTGGCT TERM 1466 2267261 - 2267288 + F 93 -12.8 -3.79849 | opp_overlap 2267258 2267261, overlap 2267258 AACCTCAATAAATAA CGATGCCTCC AGAAACAC GGAGGCATCG TTGTTCATATCGTTG TERM 1467 2267288 - 2267261 - f 95 -13.5 -4.2204 | opp_overlap 2267261 2267258, overlap 2267258 AACCTCAATAAATAA CGATGCCTCCA GAAACA CGGAGGCATCG TTGTTCATATCGTTG PD1932 2267550 - 2268125 + | hypothetical protein hecB 2269902 - 2268193 - | hemolysin activation protein PD1934 2272979 - 2270478 - | hypothetical protein TERM 1468 2270952 - 2270972 + g 74 -8.1 -4.03234 | GATGCGCTCACGGTC GACGACGCC CAA GGCGACGGC TTTGTCTACAGCGGC TERM 1469 2271570 - 2271559 - G 74 -7.2 -4.15222 | overlap 2271560 AGGCGGTCTAAGAAA GGGC GGTC GCCC TGTGGGGAGGCGCCC gyrA 2275913 - 2273232 - | DNA gyrase subunit A TERM 1470 2274684 - 2274695 + g 75 -5.8 -4.59414 | TGCCCAGGTTTTGGC GAGC AGGC GCTC TTTTGCTTCTTGTGG mtnA 2277171 - 2276107 - | methylthioribose-1-phosphate isomerase PD1937 2277991 - 2277302 - | hypothetical protein lysS 2279148 - 2278195 - | lysyl-tRNA synthetase PD1939 2279615 - 2279145 - | N-acetyltransferase TERM 1471 2279286 - 2279269 - G 88 -11.3 -4.15565 | CGCAGCAGGTCAAAA CCGAGTG CCTG CACTCGG GCTTCCAGATGGGCG ligA 2282121 - 2279626 - | NAD-dependent DNA ligase LigA TERM 1472 2279729 - 2279747 + g 90 -4.4 -5.40072 | GAGCCTGGATCTTCT CCAGCAAC AAG GAAGCTGG TTTTTTTGGACACAC TERM 1473 2280931 - 2280876 - G 74 -9.6 -3.71848 | gap 1, overlap 2280877 2280891 CTGTTTCACGAACAA TCTCGGAACCACAG-ACGGGGCACGCC ATC GGCATGCTCCATGCGGTGGCTCCAGGG GGGCGGCTGTCGGTG TERM 1474 2280930 - 2280877 - G 76 -13.1 -2.82895 | gap 1, overlap 2280876 2280891 TGTTTCACGAACAAT CTCGGAACCACAG-ACGGGGCACGCC ATC GGCATGCTCCATGCGGTGGCTCCAGG GGGGCGGCTGTCGGT TERM 1475 2282720 - 2282746 + r 74 -7.2 -4.32651 | opp_overlap 2282713 2282725 TCAGAGCACGGTGCA GTCAACGCGGTG AAG CACTGGGATGAC TTTTCATGGATTGTT zipA 2283622 - 2282891 - | cell division protein ZipA smc 2287184 - 2283681 - | chromosome segregation protein TERM 1476 2284120 - 2284096 - G 83 -8.5 -4.49556 | CCGCCACCAAATAAA CGGGGGTAGAG TGT CTGTAACCCCG CGTTGACGCGATCGA TERM 1477 2286169 - 2286155 - G 72 -11.4 -3.08679 | CGGCCTCACGTAACA CCGCCA GTG TGGCGG CATCGTCACCCATGT TERM 1478 2286947 - 2286964 + g 76 -12.7 -2.71712 | opp_overlap 2286941, overlap 2286946 CAAAGATCAGCTCAA CGGTGGC CTGT GCCACCG GTTTACGGGCGGAAG TERM 1479 2287378 - 2287353 - R 100 -12.6 -5.82036 | overlap 2287354 ACAATAAAGAAAAAA CGACAGGCGC AGTCAG GCGCCTGTCA GACACGATGGAGGTC TERM 1480 2287377 - 2287354 - R 100 -13.9 -4.05561 | overlap 2287353 CAATAAAGAAAAAAC GACAGGCGC AGTCAG GCGCCTGTC AGACACGATGGAGGT TERM 1481 2287416 - 2287401 - R 72 -9 -3.53031 | TGGAGGTCAAACGAA TCAGGG GACG CCCTGA ACAATCACCTTAACA rplI 2287850 - 2287401 - | 50S ribosomal protein L9 rpsR 2288237 - 2288007 - | 30S ribosomal protein S18 rpsF 2288680 - 2288249 - | 30S ribosomal protein S6 PD1946 2289258 - 2288920 - | hypothetical protein asnC 2289479 - 2290879 + | asparaginyl-tRNA synthetase PD1948 2291654 - 2291406 - | hypothetical protein TERM 1482 2292122 - 2292137 + G 70 -3.2 -4.78107 | TAGCTTCACTGCCCT GTTGAG CATC CTCGGC TTTTTAGTGCTGGTG rfbD 2291676 - 2292479 + | ABC transporter permease protein rfbE 2292486 - 2293226 + | ABC transporter ATP-binding protein PD1951 2293572 - 2293874 + | hypothetical protein TERM 1483 2294772 - 2294762 - g 75 -6.8 -4.52143 | overlap 2294763 GTGAAACACAAGAAA CGCT GGC AGCG AAACACGGCCGGCAC pyrD 2294155 - 2295210 + | dihydroorotate dehydrogenase 2 murB 2295207 - 2296262 + | UDP-N-acetylenolpyruvoylglucosamine reductase PD1954 2296256 - 2297191 + | hypothetical protein pgpB 2297873 - 2297166 - | phosphatidylglycerophosphatase B ispG 2299119 - 2297854 - | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase actS 2299333 - 2300550 + | two-component system, sensor protein actR 2300547 - 2301125 + | two-component system, regulatory protein tsf 2302262 - 2301384 - | elongation factor Ts TERM 1484 2302034 - 2302024 - G 78 -6.8 -4.63218 | opp_overlap 2302024 2302023, overlap 2302004 TCTTTGGCAACAAAA TCGG TCT CCGA ATTGATCTCGACCAG rpsB 2303251 - 2302451 - | 30S ribosomal protein S2 TERM 1485 2303305 - 2303336 + H 79 -12.4 -2.80784 | opp_overlap 2303303, overlap 2303303 TATGCACACACTATT TTGCGGGCTTCTTA CCTT TAAGGAACCCGCAA TGATTCCTGGGTTTA TERM 1486 2303706 - 2303734 + H 100 -17.7 -4.50976 | opp_overlap 2303706 2303712, overlap 2303712 ACGCCTCTTTAGAAA CTAAAAGTACACG AAT CGTGTACTTTTAG TTTTATCGTGTACAC TERM 1487 2303734 - 2303706 - H 100 -17.7 -3.85817 | opp_overlap 2303706 2303712, overlap 2303712 ACGCCTCTTTAGAAA CTAAAAGTACACG AAT CGTGTACTTTTAG TTTTATCGTGTACAC TERM 1488 2303712 - 2303728 + H 100 -10.9 -4.74012 | opp_overlap 2303706 2303712, overlap 2303706 CTTTAGAAACTAAAA GTACACG AAT CGTGTAC TTTTAGTTTTATCGT TERM 1489 2303728 - 2303712 - H 95 -10.9 -4.61873 | opp_overlap 2303712 2303706, overlap 2303706 CTTTAGAAACTAAAA GTACACG AAT CGTGTAC TTTTAGTTTTATCGT TERM 1490 2303744 - 2303780 + H 100 -19.7 -4.73108 | opp_overlap 2303753 TTTTAGTTTTATCGT GTACACGAATCGTGTAC TCT GTACACAATTCGTGTAC TTTTAGTTTTATCGC TERM 1491 2303952 - 2303975 + H 100 -16.8 -5.1675 | opp_overlap 2303956 GCGCCATATTCTTTG GAAACCCGCC AACA GGCGGGTTTC TTTTTTCGTGCATCG TERM 1492 2303971 - 2303956 - H 86 -11.8 -3.54129 | opp_overlap 2303952 CATATTCTTTGGAAA CCCGCC AACA GGCGGG TTTCTTTTTTCGTGC TERM 1493 2305311 - 2305299 - g 90 -5.5 -5.20783 | ACTCAAAGAGAAAAA CACGC TCA GCGTA CCAGCCACACCTACC msbA 2304205 - 2306079 + | ABC transporter ATP-binding protein pcm 2307676 - 2308332 + | protein-L-isoaspartate O-methyltransferase tolC 2308355 - 2309713 + | outer membrane export factor TERM 1494 2310277 - 2310262 - T 72 -4.8 -4.58308 | TAGGAATCAAACAAA GATTTT TGAA AAAATC GCTGAGGCCAATACC ybbF 2311100 - 2310348 - | UDP-2,3-diacylglucosamine hydrolase PD1966 2311223 - 2311453 + | hypothetical protein ppx 2313469 - 2311934 - | exopolyphosphatase TERM 1495 2312933 - 2312919 - G 80 -4.2 -5.00616 | CCCTCTGGGAAAAAA CGCC GCGTACT GGCG ATACACCCGACCTGT ppk 2315625 - 2313529 - | polyphosphate kinase phoR 2317078 - 2315738 - | two-component system, sensor protein phoB 2317791 - 2317096 - | two-component system, regulatory protein PD1971 2319502 - 2317874 - | protease grxC 2319635 - 2319940 + | glutaredoxin icdA 2320637 - 2321644 + | isocitrate dehydrogenase PD1974 2322589 - 2321948 - | hypothetical protein TERM 1496 2323338 - 2323314 - g 72 -2.2 -4.85918 | gap 1 GATCACACAACAAAA GAGCACGAATG CTGG CACT-ATGCTC CGAGTACAACACTAT ogt 2323200 - 2323718 + | 6-O-methylguanine-DNA methyltransferase TERM 1497 2324807 - 2324781 - g 70 -9.4 -3.62054 | overlap 2324799 AGCCCAAATAACTAA GCGCAACCCATT GCA AATGGGTGGCTC ATCCGGGTTCGATCC enpP 2323747 - 2325048 + | phosphodiesterase-nucleotide pyrophosphatase precursor fdx 2325591 - 2325914 + | ferredoxin PD1978 2327451 - 2325958 - | hypothetical protein PD1979 2328167 - 2327568 - | hypothetical protein TERM 1498 2328337 - 2328302 - g 82 -5.4 -5.03409 | overlap 2328308 2328309 CGAGAAAAAAAAGAA CACAAACTCGGCCAAG CCCG CTTAGCCGAACTGTTG ACACAAGTCCCAGGA TERM 1499 2328331 - 2328308 - g 88 -9.6 -4.50902 | overlap 2328302 2328309 AAAAAAGAACACAAA CTCGGCCAAG CCCG CTTAGCCGAA CTGTTGACACAAGTC TERM 1500 2328330 - 2328309 - g 71 -10.9 -3.26881 | overlap 2328308 2328302 AAAAAGAACACAAAC TCGGCCAAG CCCG CTTAGCCGA ACTGTTGACACAAGT phhB 2328245 - 2328595 + | pterin-4-alpha-carbinolamine dehydratase tonB 2328603 - 2329016 + | TonB protein rluC 2330401 - 2329409 - | pseudouridylate synthase TERM 1501 2332970 - 2332946 - g 71 -4.9 -4.65153 | opp_overlap 2332959 CTACAGAAAGCAAAA CCGATCCCG TTAACTG CGGAAGCGG TGCTTAATAACATCC rne 2330801 - 2334199 + | ribonuclease E gacA 2335293 - 2334631 - | transcriptional regulator sseA 2336316 - 2335543 - | hypothetical protein PD1986 2337318 - 2337716 + | response regulator PD1987 2338357 - 2338094 - | hypothetical protein TERM 1502 2338728 - 2338703 - R 95 -13.3 -4.36262 | ATAGCGACATGAAAA GAGCCGGAAAC GCAC GCTCCCGGCTC CTGGGAAAACCCCAA sodM 2339373 - 2338762 - | superoxide dismutase TERM 1503 2339501 - 2339482 - H 95 -12.2 -4.27617 | opp_overlap 2339477 2339482 CACACCCCACTAAAA CCCATCAG CATG CTGATGGG TGTCCTTTAGATAGA TERM 1504 2339482 - 2339501 + H 80 -12.2 -3.02324 | opp_overlap 2339482, overlap 2339477 CACACCCCACTAAAA CCCATCAG CATG CTGATGGG TGTCCTTTAGATAGA TERM 1505 2339898 - 2339885 - g 76 -3.1 -5.10064 | gap 1 GGCAACAGAGAAAAA CG-GCT ACC AGCACG TCCATACGGTTATTA rnaSA3 2339615 - 2340055 + | ribonuclease PD1990 2340052 - 2340468 + | hypothetical protein uup1 2342394 - 2340523 - | ABC transporter ATP-binding protein PD1992 2344233 - 2342674 - | hypothetical protein TERM 1506 2344602 - 2344581 - R 100 -12.3 -5.19916 | opp_overlap 2344582 AAAACACGGAAAAAA GCCGGAAGC AGGT ACTTCCGGC GTTACGAGAACAATC PD1993 2344856 - 2344635 - | temperature acclimation protein B TERM 1507 2347002 - 2346988 - g 74 -10 -3.6422 | overlap 2346986 CATCTGCTCAAAACA CTCTCC AAA GGAGAG AAACCACCATCGCAA PD1994 2346367 - 2348439 + | hypothetical protein htpX 2349539 - 2348670 - | heat shock protein HtpX TERM 1508 2349661 - 2349673 + r 84 -10.5 -3.98826 | ATCGAATATACTGAG GGCGC TTC GCGCC TTTATCACTTACTAA TERM 1509 2351174 - 2351146 - R 100 -13.9 -4.08557 | opp_overlap 2351146 TTTTTGAAATAACAA CGGCGAACCGA GATTAAA TCGGTCCGCCG TTTGAAAAAATCCAA TERM 1510 2351146 - 2351174 + r 86 -11.7 -3.54424 | opp_overlap 2351146 TTTTTGAAATAACAA CGGCGAACCGA GATTAAA TCGGTCCGCCG TTTGAAAAAATCCAA TERM 1511 2351207 - 2351185 - R 76 -4 -5.00616 | overlap 2351198 CGCCGTTTGAAAAAA TCCAACGAGC TAA GACCGCCGGA CTACAAAGCACTCTA tuf 2352414 - 2351224 - | elongation factor Tu TERM 1512 2351796 - 2351779 - G 70 -3.3 -4.76041 | opp_overlap 2351791, overlap 2351791 CACAGGCATCAAAAA CGGACGA TCAA TCGCACG CTCCGGATTCGGAAT fusA 2354638 - 2352521 - | elongation factor G TERM 1513 2353715 - 2353698 - G 70 -3.4 -4.70879 | gap 1, opp_overlap 2353709 GCTAAAGCCGAAAAA GGC-TCG CTATC CGAAGCC TTGCAGCGGCATTCG TERM 1514 2354692 - 2354677 - R 72 -10.4 -2.7806 | overlap 2354676 TTCAAATGGCCAAAC GCCGCT TCCC AGCGGC CTTCGGATGAGACAC rpsG 2355241 - 2354774 - | 30S ribosomal protein S7 rpsL 2355631 - 2355257 - | 30S ribosomal protein S12 TERM 1515 2355667 - 2355652 - R 72 -5.4 -4.41616 | ATTCTTCTAAATAAA GCACAA AAGC CTGTGC ATTAATAAAGGGAAG TERM 1516 2355703 - 2355682 - R 93 -14.5 -3.38832 | opp_overlap 2355701, overlap 2355695 CATTAATAAAGGGAA GCAGTGCAG TTAA CTGCACTGC GGTTAACAAAAACCG rpoC 2360104 - 2355881 - | DNA-directed RNA polymerase subunit beta' TERM 1517 2356826 - 2356806 - G 70 -6.9 -4.20516 | CGCGGAGGCAACAAA TACTGAGCT GAA AGATCAGTA CCGGGAATAGTCAGA rpoB 2364369 - 2360203 - | DNA-directed RNA polymerase subunit beta TERM 1518 2363190 - 2363180 - G 78 -2.6 -5.14819 | opp_overlap 2363180 AAAGTAAAAAATAAA TTAT GAA ATAA GTTTTGAGCTGCCTC TERM 1519 2363919 - 2363944 + g 88 -11.3 -4.21194 | gap 1 AAACAATGACTCGCT CGGTACCATTCA CAA TGAA-GGTACCG TTTTCAGTCATCAAC TERM 1520 2364545 - 2364564 + r 75 -11.4 -3.08133 | opp_overlap 2364545 TTGTAAGGGATAAAA GGCTGGGG GCCG TCCCAGCC TTCAATGAATCACTA TERM 1521 2364564 - 2364545 - R 93 -10.7 -4.4715 | opp_overlap 2364545 TTGTAAGGGATAAAA GGCTGGG GGCCGT CCCAGCC TTCAATGAATCACTA rplL 2364977 - 2364609 - | 50S ribosomal protein L7/L12 rplJ 2365560 - 2365033 - | 50S ribosomal protein L10 rplA 2366762 - 2366064 - | 50S ribosomal protein L1 TERM 1522 2366657 - 2366671 + g 71 -4.9 -4.66953 | overlap 2366658 CTGATTCAATAAACT TGGCC TTAGT GGCCG TTTTTAGAATCTTAA rplK 2367195 - 2366767 - | 50S ribosomal protein L11 nusG 2367950 - 2367393 - | transcription antitermination protein NusG secE 2368371 - 2367964 - | preprotein translocase subunit SecE TERM 1523 2368561 - 2368533 - R 100 -13.9 -4.08557 | opp_overlap 2368533 TTTTTGAAATAACAA CGGCGAACCGA GATTAAA TCGGTCCGCCG TTTGAAAAAATCCAA TERM 1524 2368533 - 2368561 + r 86 -11.7 -3.54424 | opp_overlap 2368533 TTTTTGAAATAACAA CGGCGAACCGA GATTAAA TCGGTCCGCCG TTTGAAAAAATCCAA TERM 1525 2368594 - 2368572 - R 76 -4 -5.00616 | overlap 2368585 CGCCGTTTGAAAAAA TCCAACGAGC TAA GACCGCCGGA CTACAAAGCACTCTA tuf 2369801 - 2368611 - | elongation factor Tu TERM 1526 2369183 - 2369166 - G 70 -3.3 -4.76041 | opp_overlap 2369178, overlap 2369178 CACAGGCATCAAAAA CGGACGA TCAA TCGCACG CTCCGGATTCGGAAT TERM 1527 2369880 - 2369896 + r 73 -10.9 -2.62616 | opp_overlap 2369873 2369870 TCGAACCATCGACCT CCTCCTT ACC AAGGAGG TGCTCTACCGACTGA ychF 2371437 - 2370346 - | translation-associated GTPase pth 2372028 - 2371450 - | peptidyl-tRNA hydrolase TERM 1528 2371802 - 2371761 - G 71 -10.5 -3.27029 | gap 1, opp_overlap 2371746, overlap 2371759 2371794 CGTGAGCAACCAACA TTTGCTCCGGTTT-AATTTT CCA AAAATTCAAACCGGCACAAA TCGACTTGCCGCTCA rplY 2372706 - 2372083 - | 50S ribosomal protein L25/general stress protein Ctc TERM 1529 2372809 - 2372795 - R 74 -5.6 -4.56775 | overlap 2372797 AGTCGTTTTTAAAAA CAGCCC GAT GGGCCA TGCAATCAATCCACA TERM 1530 2372807 - 2372797 - R 74 -8.2 -3.90048 | overlap 2372795 TCGTTTTTAAAAACA GCCC GAT GGGC CATGCAATCAATCCA prsA 2373783 - 2372815 - | ribose-phosphate pyrophosphokinase ispE 2374882 - 2373986 - | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase lolB 2375517 - 2374861 - | outer membrane lipoprotein LolB PD2020 2377193 - 2375514 - | hypothetical protein TERM 1531 2378177 - 2378165 - g 95 -10.5 -4.63218 | CGCCGTGGAAGAAAA CCGGC ACA GCCGG CGCGAAGCAGCCGAA hemA 2377260 - 2378558 + | glutamyl-tRNA reductase prfA 2378536 - 2379621 + | peptide chain release factor 1 TERM 1532 2379851 - 2379828 - T 75 -9.6 -3.64831 | overlap 2379830 CCAACAATGACATAA CAGCCACCAG TACC CTGGTGACTA CCTACTACCAACACC TERM 1533 2379849 - 2379830 - T 73 -10 -3.39274 | overlap 2379828 AACAATGACATAACA GCCACCAG TACC CTGGTGAC TACCTACTACCAACA PD2023 2382243 - 2380069 - | 23S rRNA m(2)G2445 methyltransferase TERM 1534 2380716 - 2380727 + g 83 -7.2 -4.56775 | overlap 2380715 GACTCCCCCCCTTAC CGCG CTGC CGCG TTTTTAAAGCCACCT TERM 1535 2381129 - 2381113 - G 73 -5.2 -4.58395 | CGCACCGTTGAAAAA CTGATA CTTCT TATCAG CCCGCAACCCCGTTG TERM 1536 2382334 - 2382308 - R 72 -8.7 -3.78679 | gap 1, opp_overlap 2382319 AAAACAGCAACAGAA GCCACCACACGG AGCG CCGTGTTG-GGC CATCACGCCACGCTT PD2024 2383126 - 2382599 - | hypothetical protein PD2025 2383330 - 2383899 + | hypothetical protein PD2026 2383987 - 2384268 + | hypothetical protein PD2028 2384561 - 2384295 - | hypothetical protein PD2027 2384552 - 2385259 + | hypothetical protein PD2029 2385449 - 2385757 + | hypothetical protein TERM 1537 2386341 - 2386354 + G 72 -3.7 -4.70879 | ATGAATATTGCTGTG CGACG GGAG CGACG TTTTTCGACTTTAGG PD2030 2385761 - 2387611 + | hypothetical protein PD2031 2387677 - 2388276 + | hypothetical protein PD2033 2389677 - 2389081 - | hypothetical protein PD2032 2389676 - 2389942 + | hypothetical protein TERM 1538 2390096 - 2390078 - TR 71 -9.6 -3.12942 | overlap 2390075 2390076 2390080 TCGACCAAGAAAGCA CATCCTGC TGC GCAGGATA CCGTGACTTACACAA TERM 1539 2390094 - 2390080 - TR 71 -10 -3.11832 | overlap 2390078 2390075 2390076 GACCAAGAAAGCACA TCCTGC TGC GCAGGA TACCGTGACTTACAC PD2034 2390673 - 2390359 - | hypothetical protein TERM 1540 2391034 - 2391018 - R 80 -10.1 -3.92996 | GCTCAGACAGAAGAA GACGCCG CAA CGGCATC CCTCCGTGACACCTC purK 2392189 - 2391005 - | phosphoribosylaminoimidazole carboxylase ATPase subunit purE 2392689 - 2392186 - | phosphoribosylaminoimidazole carboxylase catalytic subunit TERM 1541 2392836 - 2392824 - g 73 -9.1 -3.83998 | TTACTTGAGAGTAAA GGGCT GGA AGCCC TGAACAAGGCGATCG PD2037 2392752 - 2393021 + | hypothetical protein PD2038 2393559 - 2394644 + | hypothetical protein TERM 1542 2395613 - 2395583 - T 100 -11.2 -4.98616 | opp_overlap 2395587 GCAAAACATTAAAAA CTCACCTGAAACAT ACG AGGGTTCAGGTGAG TTAAAAAATGATAAT PD2039 2397828 - 2395663 - | oxidoreductase TERM 1543 2397424 - 2397414 - G 73 -5.4 -4.63218 | TGTTCTTTAATAAAA TACG GAC CGTA TCACCAGGGTGGGCC TERM 1544 2398933 - 2398958 + r 86 -11.3 -3.78953 | gap 1, opp_overlap 2398919 AGGTGCAGTTTCCAT CTG-CGCCAAAA TAG TTTTGGCGACAG TTTCATAATCACCAT acvB 2400273 - 2398915 - | virulence protein TERM 1545 2399546 - 2399565 + g 80 -5.6 -4.84359 | TCCAGATCAGCAGGC GGTGGGGG CAAA CTCACACC TTTTTGTGCGCCTAA rep 2402500 - 2400524 - | ATP-dependent DNA helicase/DNA helicase II TERM 1546 2401974 - 2401962 - G 71 -6.3 -4.31379 | opp_overlap 2401973, overlap 2401963 2401966 ATCAAGTCATCAAAA TCAAC GGC GTTGA ACGCTATCAGGCGTG TERM 1547 2402802 - 2402765 - R 74 -3.6 -4.97666 | gap 1 AACACATCAGAAAAA TCCTCGACCTGAACAAT TACAT ATTTTTCAG-TCGACGA AAGCCAAGATGCTGC mdoD 2404940 - 2403330 - | glucan biosynthesis protein D TERM 1548 2405396 - 2405360 - R 83 -10.3 -3.66556 | overlap 2405361 AACCTCCTAATACAA GGCGATACAAACCATTA TTA CAACAGTTTGTATCGCA CTCACACCACAACTG TERM 1549 2405395 - 2405361 - R 84 -13.8 -2.79452 | overlap 2405360 ACCTCCTAATACAAG GCGATACAAACCATTA TTA CAACAGTTTGTATCGC ACTCACACCACAACT sppA 2407556 - 2405655 - | protease IV norM 2408985 - 2407639 - | multidrug efflux protein PD2045 2409852 - 2409322 - | hypothetical protein PD2046 2410856 - 2409891 - | hypothetical protein TERM 1550 2411154 - 2411186 + H 100 -15 -4.1822 | opp_overlap 2411151 2411150 2411146 2411154 CACAAGAGAAATCCA CAGCGTTATCCACA AGCAA TGTGGATAACGCAG TTTCTTCAAATAGAA TERM 1551 2411186 - 2411154 - H 93 -15 -2.77298 | opp_overlap 2411154, overlap 2411151 2411150 2411146 CACAAGAGAAATCCA CAGCGTTATCCACA AGCAA TGTGGATAACGCAG TTTCTTCAAATAGAA TERM 1552 2412898 - 2412908 + G 74 -6.8 -4.25104 | opp_overlap 2412891 CACCAAACTCGGCAA TGCC GCT GGCA TTTTAGTAGGCACAC TERM 1553 2413059 - 2413024 - g 74 -7.5 -4.18018 | CCGTGCCACTGAAAA GCTCTCCCAGCAACT GATCCA AGTTGCTGGCCGCGC TGGCCGTGCTAAACA priA 2411294 - 2413495 + | primosome assembly protein PriA rpoH 2415879 - 2414998 - | RNA polymerase factor sigma-32 TERM 1554 2415450 - 2415439 - G 84 -5.8 -5.09426 | CCGAAGGTTAAAAAA CAGC TTTC GCTG CGCTTTGGTGGTAGC ung 2416751 - 2415990 - | uracil-DNA glycosylase PD2050 2417554 - 2416757 - | two-component hybrid sensor and regulator ftsX 2418557 - 2417619 - | cell division protein ftsE 2419240 - 2418554 - | ABC transporter ATP-binding protein rhlB 2420939 - 2419308 - | ATP-dependent RNA helicase RhlB trxA 2421135 - 2421476 + | thioredoxin TERM 1555 2421780 - 2421760 - f 77 -3.9 -5.22039 | overlap 2421761 2421762 GCGAAAGCGAAAAAA CCGTGCGTA AAA TCCGCACAA GCAAGTCCAGTGTGG TERM 1556 2422923 - 2422910 - g 86 -6.7 -5.1167 | opp_overlap 2422910 2422914, overlap 2422914 AATCGAACATAAAAA GGATG TAGT CATCC TACTTGACTCAATCA rho 2422113 - 2423393 + | transcription termination factor Rho TERM 1557 2423885 - 2423916 + T 88 -8.6 -4.8622 | overlap 2423889 TTTCTGGTGTTCACG TTTAGGCCCGCATC TAAA GACGCGGGCCTTCA TTTTTACTTCCAAAA TERM 1558 2423889 - 2423912 + T 100 -13.8 -3.88182 | overlap 2423885 TGGTGTTCACGTTTA GGCCCGCATC TAAA GACGCGGGCC TTCATTTTTACTTCC TERM 1559 2424004 - 2423986 - T 79 -9.6 -3.82191 | opp_overlap 2423984 2423986 TCAACTCGAGAACAA CCTCAACG CAT CGTTGAAG GTCTTACTAGGCTGC icd 2426202 - 2423971 - | isocitrate dehydrogenase ctpA 2428708 - 2427287 - | carboxyl-terminal protease PD2058 2430261 - 2428894 - | hypothetical protein TERM 1560 2431917 - 2431903 - g 70 -5.6 -4.46615 | opp_overlap 2431903 CACCATTAATCAAAA CGATGC ACA GCAACG TTATCAACCAAACAA PD2059 2430401 - 2432122 + | peptidase PD2060 2432362 - 2432102 - | hypothetical protein egl 2432506 - 2433576 + | endo-1,4-beta-glucanase TERM 1561 2433739 - 2433719 - T 72 -10.3 -2.9356 | ACTCACATCCAGATA CCGCCCCCA ACA CGGGGGTGG ACTCGACACTGGAGC TERM 1562 2434197 - 2434185 - T 79 -4.1 -5.243 | CAAAGCAGGAAAAAA CACTT TAA AAGCG AACATTCTTTTTGAA TERM 1563 2434318 - 2434307 - T 74 -5.8 -4.62708 | overlap 2434309 AACACATAAAAATAA TGCG GAGC CGCA GCTTCGACCAAAATC TERM 1564 2434400 - 2434385 - T 84 -10.4 -3.87373 | GACAGTCGCCAGAAA CCACGC CTAA GCGTGG GAGCCACCTCTGAGA gltD 2436047 - 2434563 - | glutamate synthase subunit beta gltB 2440656 - 2436187 - | glutamate synthase subunit alpha TERM 1565 2436941 - 2436928 - G 74 -8.1 -4.05714 | opp_overlap 2436927 ATTGTGAATCAGAAA GCGGT AATC ACCGC CGGTTTTATTGGCAA proC 2441120 - 2441974 + | pyrroline-5-carboxylate reductase cirA 2442712 - 2445318 + | tonB-dependent receptor TERM 1566 2445330 - 2445354 + F 100 -17.2 -3.57144 | opp_overlap 2445322 2445346 CTAAGTACCCTCACC GCGCGCCACT GCAAA AGTGGCGCGC TTTCCGGATGCAGAC TERM 1567 2446117 - 2446133 + G 83 -10.9 -3.92625 | AACACAATTGGTTTT TTGACGG AGG CCGTCAA TTTGATTCCGATATC TERM 1568 2446225 - 2446207 - g 70 -3.1 -4.77036 | overlap 2446208 2446209 2446217 2446218 GCTTAGCAGGAAAAA CTGACGA AGACG TCGCCAA CGACTGGACACCCGT fucA1 2445405 - 2447159 + | alpha-L-fucosidase TERM 1569 2447824 - 2447846 + T 100 -9.2 -5.77853 | opp_overlap 2447824 CACCATAATGTGAAA TCCCAACC CTGATCC GGTTGGGA TTTTTTTTGCCCGTT TERM 1570 2447846 - 2447824 - T 76 -9.2 -3.70068 | opp_overlap 2447824 CACCATAATGTGAAA TCCCAACC CTGATCC GGTTGGGA TTTTTTTTGCCCGTT PD2068 2448478 - 2448095 - | hypothetical protein TERM 1571 2448524 - 2448536 + r 71 -10.5 -2.74784 | overlap 2448521 2448521 ACGCGCACGTGGTTT GCGCG TCA CGCGC TGGATTTTCGCGCCT PD2069 2449366 - 2448941 - | hypothetical protein hsdR 2453200 - 2450105 - | type I restriction-modification system endonuclease TERM 1572 2451276 - 2451288 + g 71 -6.2 -4.3586 | GAGTACGCCACGATG GCCC TGTAC GGGC TTTTGATCTGCGTGA TERM 1573 2451752 - 2451762 + g 71 -8.2 -3.84719 | overlap 2451746 GAGCAGCTTGCGCGA GGCG ATG CGCC TTTCAATTTCCGCGT hsdS 2454521 - 2453187 - | type I restriction-modification system specificity determinant hsdM 2456902 - 2454521 - | type I restriction-modification system DNA methylase TERM 1574 2454733 - 2454722 - G 84 -5.8 -5.00616 | TTCGCGGGCAAAAAA GGCA TCAA TGCC GCCTGGTTCCTGCAA TERM 1575 2455336 - 2455320 - G 70 -6.5 -4.11216 | opp_overlap 2455320 TCGCCAGTGGCAAAA CGCAGTG ACT CAATGCG TTCGTCAGAGAGCTG TERM 1576 2455567 - 2455580 + g 80 -9.5 -3.9461 | ACTGCACCTTGCCAC GGCGC GCTT GCGCC TTCTTATTGGCCAGC PD2073 2457582 - 2456914 - | hypothetical protein TERM 1577 2456999 - 2457016 + g 75 -6.9 -4.51378 | opp_overlap 2457000, overlap 2457000 TGGCACTCTGCCAGA AGCGTGG GCGT CCACGCG TTTTCTGATCTGACT TERM 1578 2457000 - 2457015 + g 71 -10.4 -3.30104 | opp_overlap 2457000, overlap 2456999 GGCACTCTGCCAGAA GCGTGG GCGT CCACGC GTTTTCTGATCTGAC TERM 1579 2457015 - 2457000 - G 71 -10.4 -3.29511 | opp_overlap 2457000 2456999 GGCACTCTGCCAGAA GCGTGG GCGT CCACGC GTTTTCTGATCTGAC hsdR 2460613 - 2457629 - | type I restriction-modification system endonuclease TERM 1580 2458076 - 2458057 - G 75 -3.6 -4.92757 | overlap 2458058 CGACCAACAACAAAA TGAAATCA ACAT TGATTTCC ACCTGCTTGATGAGT hsdS 2461866 - 2460649 - | type I restriction-modification system specificity determinant TERM 1581 2461454 - 2461476 + g 73 -5.7 -4.43844 | gap 1, overlap 2461454 2461455 GCACCATTCTGATTT G-CTTCTACA TAGC TGTAGAAGGC TTTTGTGCCTAGTAG hsdM 2463709 - 2462126 - | type I restriction-modification system DNA methylase TERM 1582 2463924 - 2463946 + H 88 -7.6 -5.08601 | overlap 2463925 TCCGGCGTACTCCTG ACAGTCCCCC CCC GGAGGACTGC TTTTTCTTAGCGTCA TERM 1583 2463925 - 2463945 + H 82 -11.1 -3.64438 | overlap 2463924 CCGGCGTACTCCTGA CAGTCCCCC CCC GGAGGACTG CTTTTTCTTAGCGTC TERM 1584 2464094 - 2464124 + H 76 -9.1 -3.75629 | CTTTGCATATCGCCC CATTCCGTCAG CCCCCATCT CTGACGGAGTG TTTCACTTGGACGTG rhtC 2464219 - 2464839 + | amino acid transporter PD2078 2465622 - 2465092 - | hypothetical protein PD2079 2465775 - 2467316 + | hypothetical protein PD2080 2467297 - 2468010 + | hypothetical protein TERM 1585 2470243 - 2470233 - g 87 -2.4 -5.69793 | AGAGCAAACAAAAAA CGGC GCA GCAG ATGTGGAATCAGGCC PD2081 2468003 - 2471434 + | hypothetical protein TERM 1586 2472321 - 2472291 - g 72 -11.1 -3.02144 | gap 1 CTACGGCTGGGAACA GCTGGCACGC-GCC GCGT GGCTGCATGCCTGC CAACTGTACTACTGG PD2082 2471431 - 2472636 + | hypothetical protein PD2083 2473139 - 2472939 - | hypothetical protein PD2084 2474110 - 2473322 - | hypothetical protein TERM 1587 2473649 - 2473665 + g 89 -2.9 -5.52986 | CGCACCCATGGCTTG CTCATCG GCT TGCTGAG TTTTTTTCATCAGAT PD2085 2475931 - 2474831 - | hypothetical protein TERM 1588 2476585 - 2476606 + r 77 -10.9 -3.26546 | overlap 2476578 CACCACCGCGCCGCT GCACACGCA TAAA TGTGTGTGC TTGCTGGGTTTCTAG PD2086 2477223 - 2476618 - | hypothetical protein TERM 1589 2476836 - 2476850 + g 77 -3.5 -5.00616 | TGATGACATTGCCGC CACTG CTCCA CGGTG TTTTTTGGGGAAAGA TERM 1590 2477342 - 2477330 - H 81 -4.7 -5.10497 | opp_overlap 2477331, overlap 2477331 AATGTATGGAAAAAA CCGGC GTG GCCGT TATCTATAAAGCATC TERM 1591 2478585 - 2478563 - g 95 -5.5 -5.40072 | overlap 2478566 2478567 GGCGGTGGAAAAAAA CACCGGCCA TCGTC TGGCCATTG CGATCCCCGAATTTA PD2087 2477799 - 2478680 + | hypothetical protein TERM 1592 2478779 - 2478794 + G 86 -10.4 -4.09117 | CTGGCGATGCTTCAT CACCGC TACC GCGGTG TTGTTTATGGCTCAC TERM 1593 2479535 - 2479519 - g 93 -4.4 -5.52384 | CGGCGATTAAAAAAA CAACCG GGTAT CAGTTG GCCATTGCAGCCCCA PD2088 2478684 - 2479646 + | hypothetical protein TERM 1594 2479776 - 2479788 + G 86 -4.1 -5.31456 | AGTCTTGAAATTATT CATAG GAT CTGTG TTTTTTATGGCTTAC PD2089 2479753 - 2480217 + | hypothetical protein TERM 1595 2480248 - 2480234 - f 73 -4.4 -4.90013 | overlap 2480239 TAATTTAAGGAAAAA TTAAAT GAC ATTTAA TGACATCATGAATAG PD2090 2480238 - 2480747 + | hypothetical protein PD2091 2480749 - 2481333 + | hypothetical protein PD2092 2481349 - 2481564 + | hypothetical protein PD2093 2481568 - 2482080 + | hypothetical protein TERM 1596 2482601 - 2482572 - g 74 -9.9 -3.73775 | opp_overlap 2482588 GCCAGTGTTAGCAAA CGGATCACTCCGC TCCC GCCGCGCGATCCG CTGGCGTTGGATTTG frpC 2482077 - 2482874 + | hemolysin-type calcium binding protein TERM 1597 2483888 - 2483866 - g 95 -5.5 -5.40072 | overlap 2483869 2483870 GGCGGTGGAAAAAAA CACCGGCCA TCGTC TGGCCATTG CGATCCCCGAATTTA PD2095 2483105 - 2483983 + | hypothetical protein PD2096 2483987 - 2484940 + | hypothetical protein TERM 1598 2485542 - 2485513 - g 74 -9.9 -3.73775 | opp_overlap 2485529 GCCAGTGTTAGCAAA CGGATCACTCCGC TCCC GCCGCGCGATCCG CTGGCGTTGGATTTG frpC 2484943 - 2487942 + | hemolysin-type calcium binding protein TERM 1599 2488001 - 2487959 - T 100 -20.1 -3.2614 | gap 2, opp_overlap 2487957 2487959, overlap 2487943 2487960 CAGGCTGGAGATGAA CCTCGCCACCCCGCCCAGAAA CGC TTTCTGGACGGGGTG-CG-GG AAAGTTGTAGTGATG TERM 1600 2487959 - 2488005 + T 73 -9.5 -3.44229 | gap 2, opp_overlap 2487943 2487959 2487960, overlap 2487957 CAGGCTGGAGATGAA C-CTCGC-CACCCCGCCCAGAAA CGC TTTCTGGACGGGGTGCGGGAAAG TTGTAGTGATGCGGT TERM 1601 2488001 - 2487960 - T 100 -20.3 -2.5547 | gap 1, opp_overlap 2487957 2487959, overlap 2487943 2487959 AGGCTGGAGATGAAC CTCGCCACCCCGCCCAGAAA CGC TTTCTGGACGGGGTG-CGGG AAAGTTGTAGTGATG PD2098 2489276 - 2488515 - | hypothetical protein TERM 1602 2488979 - 2488965 - G 76 -5.6 -4.7497 | opp_overlap 2488964 TGCACCGAGGAAAAA GCCCTC TAA GAGTGC GTACATTGGTGCGGT TERM 1603 2488995 - 2489009 + g 80 -4.2 -5.00884 | GTACATTGGTGCGGT GATTGG TGA CCACTC TTTTTTGAAAGCAGT TERM 1604 2491183 - 2491193 + G 74 -4.6 -4.82901 | overlap 2491186 TTGCCGCGCTGGCGT TGCG GGC CGCG TTTTTGTCCAACCCC TERM 1605 2491385 - 2491415 + G 89 -13.2 -3.53224 | opp_overlap 2491381 CGCCAAGACCACCTG GGCCAGCGTCAAGG ACG CCTGTGCGCTGGCC TTTAGCCACAGCATC PD2103 2490468 - 2491871 + | hypothetical protein PD2104 2492253 - 2491945 - | hypothetical protein PD2105 2492556 - 2492257 - | hypothetical protein PD2106 2492644 - 2493189 + | hypothetical protein TERM 1606 2493203 - 2493223 + T 72 -8.1 -3.74693 | overlap 2493205 2493213 2493214 GATTTGGCGGTAGGT GCCGCCCGG TCC CCAGGCGTC TTTGATGGCCTGGGC TERM 1607 2493205 - 2493221 + T 70 -9.3 -3.4582 | overlap 2493203 2493213 2493214 TTTGGCGGTAGGTGC CGCCCGG TCC CCAGGCG TCTTTGATGGCCTGG TERM 1608 2493449 - 2493414 - T 90 -14.1 -3.39449 | opp_overlap 2493413 2493412 2493416 TTGCAGTAATACCAA CACAGATACCGCCCC ATGAGG GGAACGGCATCTGTG GATTTAAATAAATCA PD2107 2493877 - 2493497 - | hypothetical protein PD2108 2495012 - 2493882 - | hypothetical protein TERM 1609 2494963 - 2494979 + g 71 -10.1 -3.61398 | TTTTGCAGCATTTGG GTGGCCG GGC CGGTCAC TTGTTGGCCGGCGGC PD2109 2495715 - 2495320 - | hypothetical protein pspA 2497022 - 2495712 - | hemagglutinin-like secreted protein TERM 1610 2496893 - 2496932 + g 100 -16.4 -3.67597 | gap 1 ATAATCCGGTGAGGA CGCTGGAGGCGGCGGCGCC TTG GGCGCCACTGC-TGCAGCG TTGTTGGCTGGCCCC TERM 1611 2496992 - 2497046 + g 71 -7.2 -3.95324 | gap 3, overlap 2496978 2497031 GGGCGGCGTGTAGGG GGCTGCCTTCGGTCAGTTGGCCGGTGG CCAC CCAGTGGCCAA-TGGC-GGTGGC-GCC TTGTTGTTGGACGTA TERM 1612 2497155 - 2497175 + r 72 -8.1 -3.74693 | overlap 2497157 2497165 2497166 GATTTGGCGGTAGGT GCCGCCCGG TCC CCAGGCGTC TTTGATGGCCTGGGC TERM 1613 2497157 - 2497173 + r 70 -9.3 -3.4582 | overlap 2497155 2497165 2497166 TTTGGCGGTAGGTGC CGCCCGG TCC CCAGGCG TCTTTGATGGCCTGG PD2111 2497839 - 2497462 - | hypothetical protein PD2112 2498208 - 2497849 - | hypothetical protein TERM 1614 2498378 - 2498343 - R 72 -9.1 -3.52522 | gap 1, opp_overlap 2498365 TTACAGAAATACCAA CACAGATACCGC-CCC ATGAG GGGCACAGCATCTGTG GATTTAAATAAATCA PD2113 2498846 - 2498445 - | hypothetical protein PD2114 2499186 - 2498827 - | hypothetical protein TERM 1615 2499372 - 2499319 - R 71 -9.8 -3.27676 | gap 3, opp_overlap 2499327 2499329, overlap 2499315 2499317 2499321 2499329 ACTTACGGAAATACA CACGT-GA-ACACTGCTGCCGC-CCCC TTG GGGGCACGGCAGCAGTGTATCTAAATA AACTATCGCAGCAGA TERM 1616 2499369 - 2499321 - R 79 -11.8 -3.20029 | gap 2, opp_overlap 2499327 2499329, overlap 2499315 2499319 2499317 2499329 TTACGGAAATACACA CGTGA-ACACTGCTGCCGC-CCCC TTG GGGGCACGGCAGCAGTGTATCTAA ATAAACTATCGCAGC TERM 1617 2499327 - 2499362 + r 100 -19.8 -2.91582 | gap 1, opp_overlap 2499321 2499315 2499319 2499317 2499329, overlap 2499329 AAATACACACGTGAA CACTGCTGCCG-CCCCC TTG GGGGCACGGCAGCAGTG TATCTAAATAAACTA TERM 1618 2499329 - 2499360 + r 100 -16.6 -3.0094 | gap 1, opp_overlap 2499321 2499315 2499319 2499317 2499329, overlap 2499327 ATACACACGTGAACA CTGCTGCCG-CCCCC TTG GGGGCACGGCAGCAG TGTATCTAAATAAAC TERM 1619 2499360 - 2499329 - R 100 -18.8 -3.09202 | gap 1, opp_overlap 2499329 2499327, overlap 2499321 2499315 2499319 2499317 ATACACACGTGAACA CTGCTGCCGC-CCCC TTG GGGGCACGGCAGCAG TGTATCTAAATAAAC PD2115 2499801 - 2499409 - | hypothetical protein pspA 2501129 - 2499813 - | hemagglutinin-like secreted protein TERM 1620 2501000 - 2501039 + g 100 -16.4 -3.67597 | gap 1 ATAATCCCGTGAGGA CGCTGGAGGCGGCGGCGCC TTG GGCGCCACTGC-TGCAGCG TTGTTGGCTGGCCGC TERM 1621 2501099 - 2501153 + g 71 -7.2 -3.95324 | gap 3, overlap 2501085 2501138 GGGCGGCGTGTAGGG GGCTGCCTTCGGTCAGTTGGCCGGTGG CCAC CCAGTGGCCAA-TGGC-GGTGGC-GCC TTGTTGTTGGACGTA TERM 1622 2501262 - 2501282 + r 72 -8.1 -3.74693 | overlap 2501264 2501272 2501273 GATTTGGCGGTAGGT GCCGCCCGG TCC CCAGGCGTC TTTGATGGCCTGGGC TERM 1623 2501264 - 2501280 + r 70 -9.3 -3.4582 | overlap 2501262 2501272 2501273 TTTGGCGGTAGGTGC CGCCCGG TCC CCAGGCG TCTTTGATGGCCTGG PD2117 2501946 - 2501569 - | hypothetical protein TERM 1624 2501786 - 2501806 + g 73 -5.5 -4.6372 | opp_overlap 2501785 2501789 CCCTCATCCAGTAAT TTACCTATT ATA AATAGGAAA TCTTTTTTTCTTTCT TERM 1625 2501843 - 2501866 + g 73 -5.2 -4.60797 | GAGGCTGGATCTACT TGCGTAGGAG GAGT CGCATACGCA TTTTCTATATAACCC pspA 2512329 - 2501956 - | hemagglutinin-like secreted protein TERM 1626 2502933 - 2502984 + g 74 -8.6 -4.05788 | gap 1, opp_overlap 2502927, overlap 2502965 2502966 CGGCACAACCCAGGA GACCTTGCAGGGCGCTGCGGGCGGT GTC GCTGCCCAGGGTGT-CGGCAAGGTC TTTGATTTCGCGGGC TERM 1627 2503046 - 2503062 + g 71 -10.1 -3.61398 | TTTTGCAGCATTTGG GTGGCCG GGC CGGTCAC TTGTTGGCCGGCGGC TERM 1628 2503610 - 2503666 + g 81 -8.6 -4.28375 | gap 1 GTGCCGACGGTGCCG CCGTTGCGGCTGTAGCCGCCGCCCAGG TTGA CTTGGGTGGCGG-TGTAGGTGGCGCGG TTTTCAATGTCTTGC TERM 1629 2504002 - 2504016 + g 70 -9.2 -3.72893 | overlap 2504005 AATGACGTGTTTGGC GGTGCC AAT GGCGCC TTTCATGAGGAGGTC TERM 1630 2504545 - 2504565 + g 83 -14.7 -2.52602 | overlap 2504542 2504538 2504547 GGCGTGGAGGCGGGG GTCGCCGCT GCG AGCGGCGGC GTGTTGCATTTGCTG TERM 1631 2504547 - 2504566 + g 83 -12.8 -3.21807 | overlap 2504545 2504542 2504538 CGTGGAGGCGGGGGT CGCCGCTG CGAG CGGCGGCG TGTTGCATTTGCTGG TERM 1632 2506576 - 2506607 + g 76 -12.2 -3.02471 | TTGGGCGGCAATGTG TTGGTGGCCGCCGC TGGT GATGCGGCCGCCAA TCTGTGTGGTGGGGG TERM 1633 2507445 - 2507487 + g 74 -3.2 -4.85782 | overlap 2507450 AGATGTCGTGGGCGT CGTAGTTGCTGCTCAGTCGG AAG TCGCCTGAGCCGCCGTTGGG TTTGTTTTTGCGCCA TERM 1634 2508150 - 2508172 + g 100 -15.6 -3.16191 | CTTGGGCGGTGAGGT CGGCGGCTTG GAG CAAGCCGCTG TTGGTCAGGGTGTCG TERM 1635 2513161 - 2513193 + r 78 -4.9 -5.0809 | gap 1, opp_overlap 2513168, overlap 2513164 2513168 GCGTGTAATAGTCAA GC-GTAAAGCCCGC ATTAAA GCGGGCTTTATAGG TTTTTCTGGTTTGTT TERM 1636 2513164 - 2513189 + r 82 -13.4 -2.90341 | opp_overlap 2513168, overlap 2513161 2513168 TGTAATAGTCAAGCG TAAAGCCCGC ATTAAA GCGGGCTTTA TAGGTTTTTCTGGTT TERM 1637 2513185 - 2513168 - R 79 -9.8 -3.67417 | opp_overlap 2513164 2513161 2513168 ATAGTCAAGCGTAAA GCCCGC ATTAAA GCGGGC TTTATAGGTTTTTCT TERM 1638 2513168 - 2513185 + r 83 -9.8 -4.10363 | opp_overlap 2513168, overlap 2513164 2513161 ATAGTCAAGCGTAAA GCCCGC ATTAAA GCGGGC TTTATAGGTTTTTCT trmE 2514585 - 2513230 - | tRNA modification GTPase TrmE TERM 1639 2513793 - 2513779 - G 74 -4.3 -4.78077 | GTCAACTAAAACAAA TTCCA AGCCA TGGAA ATGTACGCTCTCTCG PD2120 2517284 - 2514582 - | hypothetical protein TERM 1640 2514817 - 2514805 - G 70 -2.7 -4.80453 | GGAGGATAAAAGAAA CCAAA ATT TTTAG ACGTCAGTAAAAAGT PD2121 2519071 - 2517374 - | putative inner membrane protein translocase component YidC TERM 1641 2517793 - 2517815 + g 71 -6.3 -4.24948 | opp_overlap 2517793 TTTCTTTCTTATATA GTTCCATCA TCGCT TGCTGGAAC TTTTGCCTATCCTCA rnpA 2519523 - 2519116 - | ribonuclease P rpmH 2519722 - 2519582 - | 50S ribosomal protein L34