TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.515208 %AT, 3804615 nt, 33203 terms. Intergenic: 0.582178 %AT, H2T: 521051 nt, 4767 terms; T2T: 162628 nt, 3523 terms; H2H: 241913 nt, 3685 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|122815790|ref|NC_008791.1| Yersinia enterocolitica subsp. enterocolitica 8081 plasmid pYVe8081, complete sequence (length 67721) YEP0001 628 - 1287 + | putative transposase trp1400A 1571 - 1284 - | IS1400 transposase A TERM 1 1372 - 1384 + g 85 -2.7 -5.58454 | CGTCGGTTCTCATCT TCAAG GTC TTTGA TTTTTTTAATATCAG TERM 2 1970 - 1994 + G 73 -8.5 -3.87641 | GTACTATGGTCATGA GTGGTCAGGCG TGA CACCTGAGCAC TTTATGCAGCATGTT YEP0003 1674 - 2108 + | putative transposase yopQ 2839 - 2291 - | virulence plasmid protein TERM 3 2393 - 2376 - G 80 -4.9 -5.16133 | opp_overlap 2379, overlap 2377 AGCATAATACAAAAA CGATGAA AATT TTCATCA TATAGATATTTTTTT TERM 4 2418 - 2435 + g 71 -4.9 -4.63527 | overlap 2419 TTTTTTATGTCATCA TTCTCTA TAAG TAGAGAG TTTTTCGGATCATAC TERM 5 2942 - 2932 - H 74 -4 -4.91712 | CGTAATTTATAAAAA TAGA ATA TCTA CTCTCAATGAGCTTC TERM 6 3172 - 3162 - H 73 -2.6 -5.18726 | opp_overlap 3141, overlap 3141 TTTTTATAATAAAAA TTAA CTT TTAA CTATTGAAAAAATAT TERM 7 3611 - 3626 + G 72 -6.2 -4.4767 | CCTTCAGTATGATTA TGTATC GCAT GATACA TTTTGTACTCAGTAC yopT 3352 - 4320 + | plasmid type III secretion system effector protein sycT 4320 - 4712 + | chaperone of YopT TERM 8 4751 - 4724 - T 72 -7.2 -4.05026 | opp_overlap 4724 4725, overlap 4725 4727 CTGAAATGTAAACAA TCATATCTATTA AATT TAATAGATATGG TTTATATAATAACTC TERM 9 4724 - 4751 + T 85 -9.4 -4.0942 | opp_overlap 4724 4725 4727, overlap 4725 CTGAAATGTAAACAA TCATATCTATTA AATT TAATAGATATGG TTTATATAATAACTC TERM 10 4750 - 4725 - T 79 -10.7 -3.02293 | opp_overlap 4724 4725, overlap 4724 4727 TGAAATGTAAACAAT CATATCTATTA AATT TAATAGATATG GTTTATATAATAACT TERM 11 4725 - 4750 + T 79 -10.7 -3.0517 | opp_overlap 4725 4724 4727, overlap 4724 TGAAATGTAAACAAT CATATCTATTA AATT TAATAGATATG GTTTATATAATAACT TERM 12 5949 - 5967 + T 72 -7.6 -3.77464 | TTTAACTGATTTCAA TGTAAAAA TAT TTTTTACA TTTGGTAACTCATGT YEP0007 6202 - 6065 - | hypothetical protein TERM 13 6180 - 6162 - G 71 -3 -4.93898 | opp_overlap 6179, overlap 6166 ATACCAGCATAAAAA GCAACGCA CAA TGCGGTGG CTATCACTAGTCGTT yopM 8827 - 7724 - | yop type III secretion system effector protein TERM 14 8806 - 8796 - G 74 -4 -5.00616 | opp_overlap 8796 GGTTCTTGCAAAAAA GTAT TAG ATAC ATTTCTTGGAGTTAT YEP0011 8950 - 9168 + | hypothetical protein TERM 15 9565 - 9526 - T 84 -11 -3.73068 | gap 1, opp_overlap 9531, overlap 9508 9531 TTTTTAATTTAATAA TAAAAGCCCTGGATTAACT AAT AGT-AATCCAAGGCTTTTC AGCACCTTATACCTT TERM 16 9560 - 9531 - T 100 -10.9 -4.91987 | gap 1, opp_overlap 9531, overlap 9526 AATTTAATAATAAAA GCCCTGGATTAACT AAT AGT-AATCCAAGGC TTTTCAGCACCTTAT TERM 17 9531 - 9560 + T 83 -8.7 -4.10007 | gap 1, opp_overlap 9531 9526 AATTTAATAATAAAA GCCCTGGATTAACT AAT AGT-AATCCAAGGC TTTTCAGCACCTTAT yopD 10574 - 9654 - | translocator protein yopB 11798 - 10593 - | virulence plasmid YopB transmembrane effector protein TERM 18 11406 - 11422 + g 87 -6.5 -5.14985 | opp_overlap 11405 11407, overlap 11407 GTTTTGTTCATGAAG ACGCTGA ATA TCAGCGA TTTTTATGTCTTTGC TERM 19 11421 - 11407 - G 70 -10 -3.13403 | opp_overlap 11406 11407, overlap 11405 TTTTGTTCATGAAGA CGCTGA ATA TCAGCG ATTTTTATGTCTTTG TERM 20 11407 - 11421 + g 76 -10 -3.67364 | opp_overlap 11407 11405, overlap 11406 TTTTGTTCATGAAGA CGCTGA ATA TCAGCG ATTTTTATGTCTTTG sycD 12282 - 11776 - | yopB/D chaperone/regulatory protein lcrV 13259 - 12285 - | virulence-associated V antigen TERM 21 12387 - 12397 + g 75 -3.2 -5.08824 | opp_overlap 12382, overlap 12382 TGATGTAATATCAGA CAGC TGA GTTG TTTTTTGGCTAACCA lcrG 13548 - 13261 - | low calcium response locus protein g lcrR 14030 - 13590 - | low calcium response locus protein R lcrD 16141 - 14027 - | low calcium response locus membrane protein d TERM 22 15446 - 15415 - G 79 -9.5 -3.89822 | CAGGTACCTGAGAAA CCATCCCATCCCC GACAGT GAGGATGGAATAG AGTTGCAGTGCCTCA yscY 16472 - 16128 - | hypothetical protein yscX 16837 - 16469 - | hypothetical protein sycN 17205 - 16834 - | YopN chaperone SycN tyeA 17470 - 17192 - | type III secretion system protein yopN 18332 - 17451 - | type III secretion outer membrane protein TERM 23 18465 - 18482 + H 71 -4.1 -4.7497 | opp_overlap 18455 18454, overlap 18454 AAAACTCGCGGCTCC CGCTACA ATTT TTTAGCG TTTTTAGTCACTAAA TERM 24 18713 - 18694 - g 86 -12.2 -3.55368 | opp_overlap 18688 18685 ACGTAACCCAGACAA CAGCCTGT CTTT ACAGGCTG AAGTCATAGGTTTTG yscN 18530 - 19849 + | type III secretion system ATPase yscO 19846 - 20310 + | type III secretion system translocation protein yscP 20310 - 21671 + | putative type III secretion protein yscQ 21668 - 22591 + | type III secretion system protein yscR 22588 - 23241 + | type III secretion system protein yscS 23243 - 23509 + | putative type III secretion protein TERM 25 23867 - 23879 + G 75 -7.7 -4.21922 | opp_overlap 23867 GACTTGATAGTCAAA CCAGT CCG ACTGG TTTACTTTTGACTCA TERM 26 23973 - 23985 + G 73 -4.7 -4.67011 | opp_overlap 23971 23970, overlap 23971 23970 CAGCTATGTAAATTG GCCGG TGG CCAGC TTTTTCCCTGAAGTT yscT 23506 - 24291 + | putative type III secretion protein yscU 24291 - 25355 + | putative type III secretion protein TERM 27 25715 - 25752 + F 100 -21.7 -4.36914 | opp_overlap 25720 TGATTCCGATTCTAA CCAAACATCCTTTCTTT CGTG AAAGAAAGGATGTTTGG TTTTATACACACAAG TERM 28 25747 - 25720 - f 100 -14.4 -3.91911 | opp_overlap 25715 CCGATTCTAACCAAA CATCCTTTCTTT CGTG AAAGAAAGGATG TTTGGTTTTATACAC TERM 29 26123 - 26133 + G 75 -5.4 -4.73973 | opp_overlap 26121 26123 ACTCGTTTCGAAACA GGTA ACC TACC TTTATTCTTTTCTAT virG 25931 - 26326 + | putative type III secretion effector targeting lipoprotein virF 26450 - 27265 + | virulence regulon transcriptional activator yscA 27345 - 27443 + | hydrophobic protein yscB 27668 - 28081 + | hypothetical protein TERM 30 29386 - 29374 - g 74 -4.1 -4.87291 | overlap 29382 GATGGGAACCAAAAA CCGAA TAG TTCAG GGATTGAAGGAATCC TERM 31 29573 - 29587 + G 74 -10 -3.57406 | opp_overlap 29561 29570 29565, overlap 29571 AAAGTGAGTTAACTC GCCGTA CGG TACGGC TATTTATCATCGAAC yscC 28087 - 29910 + | putative type III secretion protein TERM 32 30261 - 30240 - g 73 -5.1 -4.55287 | CCCACGCAGAGAAAA GAGCCAACC GACA GGTTACCTC GTTCACGACTTGGGA yscD 29907 - 31163 + | putative type III secretion protein yscE 31160 - 31363 + | putative type III secretion protein yscF 31360 - 31623 + | putative type III secretion protein yscG 31625 - 31972 + | putative type III secretion protein yscH 31969 - 32466 + | putative type III secretion protein yscI 32467 - 32814 + | putative type III secretion protein yscJ 32821 - 33555 + | type III secretion lipoprotein yscK 33555 - 34184 + | type III secretion protein yscL 34130 - 34801 + | type III secretion system protein yscM 35020 - 35367 + | putative type III secretion regulatory protein YEP0049 35593 - 35760 + | hypothetical protein TERM 33 36460 - 36496 + G 100 -27.5 -2.54523 | TCTCATTCACATTCA GTCCTTCACGCACCGGG AAC TCCGGTGCGTGAAGGAC TGCGTTCACATCTAG YEP0050 36049 - 37455 + | putative protein-tyrosine phosphatase Yop effector TERM 34 37528 - 37564 + T 77 -11.2 -2.85999 | opp_overlap 37527 37532, overlap 37532 CAATCAAAGAAACTT TAAACCTCAACTAA AGTAAGCAA TTAGTTGAGGTTTA TCTGCTGTAGAATAA TERM 35 37532 - 37560 + T 76 -7.6 -4.11404 | opp_overlap 37527 37532, overlap 37528 CAAAGAAACTTTAAA CCTCAACTAA AGTAAGCAA TTAGTTGAGG TTTATCTGCTGTAGA TERM 36 37560 - 37532 - T 72 -7.6 -3.78141 | opp_overlap 37532 37528, overlap 37527 CAAAGAAACTTTAAA CCTCAACTAA AGTAAGCAA TTAGTTGAGG TTTATCTGCTGTAGA YEP0051 38108 - 37677 - | putative yopH targeting protein YEP0052 38854 - 38462 - | putative YopE chaperone TERM 37 38985 - 38997 + H 76 -7.7 -4.11394 | CAGCGATTTTTTATA TAGCC ACC GGCTA TTTTCCCACTAAGAT YEP0053 39047 - 39706 + | putative outer membrane virulence protein TERM 38 39748 - 39780 + T 100 -16.5 -3.63744 | opp_overlap 39753, overlap 39753 GACACTTTTCAGCCT TAAAACGCCTGATGA ACT TCATCGGGCGTTTTG TATTTTAACGACAGA TERM 39 39775 - 39753 - T 100 -12 -4.11216 | opp_overlap 39748 39753 TTTTCAGCCTTAAAA CGCCTGATGA ACT TCATCGGGCG TTTTGTATTTTAACG TERM 40 39753 - 39775 + T 100 -14.2 -4.89567 | opp_overlap 39753, overlap 39748 TTTTCAGCCTTAAAA CGCCTGATGA ACT TCATCGGGCG TTTTGTATTTTAACG TERM 41 40229 - 40196 - T 71 -8.9 -3.32647 | gap 1, opp_overlap 40186 40196 40198 40207 GGGGAAGTAGAGTAA GAGGCAGGG-CGTAGT CGA ACTATTTCCCTGCCTC TCCTCTCCGTTTAAA TERM 42 40196 - 40229 + T 76 -11.1 -2.68532 | gap 1, opp_overlap 40196, overlap 40186 40198 40207 GGGGAAGTAGAGTAA GAGGCAGGG-CGTAGT CGA ACTATTTCCCTGCCTC TCCTCTCCGTTTAAA TERM 43 41010 - 41028 + T 71 -3 -4.99638 | opp_overlap 41008 41011, overlap 41011 TCATGGATAAAAACA AGGGGATA GTG TTTCCCCC TTTTTCTATCAATAT TERM 44 41027 - 41011 - T 74 -6.5 -4.5448 | opp_overlap 41010 41011, overlap 41008 CATGGATAAAAACAA GGGGATA GTG TTTCCCC CTTTTTCTATCAATA TERM 45 41053 - 41082 + T 74 -4.4 -5.0538 | gap 2, opp_overlap 41052, overlap 41052 41054 CAATATTGCGAATAT C--TTCGTCCCTGA TCTT TCAGGGGCGAATCG TTTTTTAGCATGCCC TERM 46 41054 - 41079 + T 100 -14.1 -3.38726 | opp_overlap 41052, overlap 41052 41053 AATATTGCGAATATC TTCGTCCCTGA TCTT TCAGGGGCGAA TCGTTTTTTAGCATG YEP0057 41434 - 41132 - | hypothetical protein YEP0058 41669 - 41427 - | hypothetical protein TERM 47 42286 - 42260 - R 81 -7.3 -4.72986 | TATCGCTATCAAAAA GCCGACATCAT GCTTA ATGACGTTGGC AGTCGACCAGGTCAG TERM 48 42908 - 42890 - R 73 -5.9 -4.55209 | opp_overlap 42890 TATACACTAAATAAA GGCGGGC AGACA ACCCACC TTGTTCTGATCTTAT YEP0061 43893 - 42931 - | plasmid-partitioning protein YEP0062 45059 - 43893 - | plasmid-partitioning protein SopA YEP0063 45588 - 45373 - | hypothetical protein TERM 49 46045 - 46076 + r 100 -16 -3.55447 | gap 1, opp_overlap 46043 46039 GTTTTAAAATTCATT CCAGGTGGCGGTGTT TTA AAT-CCGCCACCTGG TTATATAATAAATCA yomA 46984 - 46109 - | hypothetical protein TERM 50 47025 - 46990 - R 74 -9.2 -3.30443 | opp_overlap 46995, overlap 46995 TCATTAGCATATGAA TAAAACACCGATTAAA ATTA TGTAATCGGTGTTTTC CTATAGACTTGTTAA TERM 51 47020 - 46995 - R 100 -9.1 -4.76075 | opp_overlap 46995, overlap 46990 AGCATATGAATAAAA CACCGATTAAA ATTA TGTAATCGGTG TTTTCCTATAGACTT TERM 52 46995 - 47020 + r 86 -9.1 -4.35518 | opp_overlap 46995 46990 AGCATATGAATAAAA CACCGATTAAA ATTA TGTAATCGGTG TTTTCCTATAGACTT YEP0066 48322 - 47054 - | putative YadA invasin TERM 53 47515 - 47527 + g 81 -3.4 -5.45726 | opp_overlap 47515 AAGTTGTTCTAGCAA CACT ATTTG AGTG TTTTTTTGCCATATC TERM 54 48058 - 48018 - G 95 -14.2 -3.65199 | AATGCCTTACTTAAA GGACCAATTGCAACAGAA TTAAC TCCTGTTGCAATTGAACC AGCGCCCACAGCAAC TERM 55 49610 - 49595 - H 70 -2.6 -4.9755 | gap 1 ATATATAATCAAAAA GGA-ATG ACA CATGTCC CAACCCTTCGATTTC TERM 56 49812 - 49801 - g 72 -5.8 -4.39347 | opp_overlap 49800 49801, overlap 49795 49794 AAAAAACAGTCAAAA CACC CACT GGTG CTTTTGAATTGGCCA TERM 57 49896 - 49875 - g 80 -4.5 -5.03145 | CAATTGGTGAAAAAA CATCAGA CCACGCTT TCTGATG AGATAGAGCGCAAGA YEP0069 49605 - 50807 + | transposase TERM 58 50935 - 50895 - T 100 -8.4 -5.60689 | opp_overlap 50913, overlap 50897 50916 50918 GTAGACAAGAAAAAA CTCAATCTAGCAGCCA TCTAATATC TAGCCGCTAGATTGCG GCTAGATATTATTTT TERM 59 50933 - 50897 - T 71 -9.6 -2.95245 | opp_overlap 50913, overlap 50895 50916 50918 AGACAAGAAAAAACT CAATCTAGCAGCCA TCTAATATC TAGCCGCTAGATTG CGGCTAGATATTATT TERM 60 50913 - 50946 + T 100 -17 -5.02439 | opp_overlap 50897 50895 50916 50918 AATCTAGCAGCCATC TAATATCTAGCCGC TAGATT GCGGCTAGATATTA TTTTTCTGCTTATAT TERM 61 50943 - 50916 - T 100 -14.3 -3.08464 | opp_overlap 50913, overlap 50897 50895 50918 CTAGCAGCCATCTAA TATCTAGCCGC TAGATT GCGGCTAGATA TTATTTTTCTGCTTA TERM 62 50941 - 50918 - T 93 -12.5 -3.10056 | opp_overlap 50913, overlap 50897 50895 50916 AGCAGCCATCTAATA TCTAGCCGC TAGATT GCGGCTAGA TATTATTTTTCTGCT YEP0071 51245 - 50937 - | hypothetical protein YEP0072 51874 - 51245 - | hypothetical protein TERM 63 51957 - 51929 - R 74 -4 -4.99056 | gap 1, overlap 51934 51945 TAATACAAGTAAAAA TATAATTGCCGCA AGAT TGCAGCAATC-TA CCTGCAAGATAATAA TERM 64 51953 - 51934 - R 79 -8.6 -4.13437 | overlap 51929 51945 CAAGTAAAAATATAA TTGCCGCA AGAT TGCAGCAA TCTACCTGCAAGATA YEP0073 52783 - 52049 - | putative resolvase/recombinase YEP0074 53117 - 52920 - | hypothetical protein TERM 65 53355 - 53378 + H 71 -8.4 -3.53597 | overlap 53353 53362 53367 ATTTTAATTATGTTT TGATTATTAT CAGG ATAATAATCA TATTGTTATCCTTGT TERM 66 53367 - 53389 + H 77 -8.6 -3.97108 | overlap 53355 53353 53362 TTTTGATTATTATCA GGATAATAAT CAT ATTGTTATCC TTGTATTTTAAAGTT TERM 67 53578 - 53546 - H 75 -8.5 -3.78909 | overlap 53547 TAAGCAGAAAATTAA CGGCATTCCACTG ACTTATG CAGTGGAATGCAA AAAGGGTTTACCGGG TERM 68 53577 - 53547 - H 72 -9.8 -2.86261 | overlap 53546 AAGCAGAAAATTAAC GGCATTCCACTG ACTTATG CAGTGGAATGCA AAAAGGGTTTACCGG TERM 69 54560 - 54532 - H 100 -17.5 -5.38054 | TCCCAGAAAGAAAAA CACCCTGTCAGCG TAC CGCTCACAGGGTG GGGGTGACCATCTCA TERM 70 55477 - 55510 + G 88 -2.3 -5.84432 | gap 1, opp_overlap 55488, overlap 55478 CCAATCTTAGGATTT TCTGGACCAGAGGCGC GCG GTGCCGCTAGT-CAGC TTTTTTTCTGTTATA YEP0080 55297 - 55728 + | hypothetical protein TERM 71 55893 - 55903 + G 73 -2.4 -5.14985 | GTGCTGCGCTTGAAC CCCC ACA GTGG TTTTTCTCTCTTTCG TERM 72 57586 - 57565 - g 73 -10.1 -3.16676 | opp_overlap 57582, overlap 57563 CGCAGCAATTGAATA CTCTCCAGC AGCA GCAGGAGAG TGCGAAAGCGCAACT yopO 55746 - 57935 + | putative targeted effector protein kinase yopJ 58302 - 59168 + | putative targeted effector protein yscM2 59787 - 60137 + | regulatory protein TERM 73 60528 - 60539 + T 70 -5.8 -4.3739 | GGCCTTTTCTGGCTG CTGG GATA CCAG TTTTCTCCGCGCCTG TERM 74 61279 - 61300 + T 77 -4.5 -5.03145 | TCTTGCGCTCTATCT CATCAGA AAGCGTGG TCTGATG TTTTTTCACCAATTG TERM 75 61363 - 61374 + T 70 -5.8 -4.39347 | opp_overlap 61362 61363, overlap 61356 61355 TGGCCAATTCAAAAG CACC AGTG GGTG TTTTGACTGTTTTTT TERM 76 61565 - 61580 + T 70 -2.6 -4.9755 | gap 1 GAAATCGAAGGGTTG GGACATG TGT CAT-TCC TTTTTGATTATATAT YEP0089 62168 - 61617 - | hypothetical protein TERM 77 62171 - 62198 + r 100 -17.2 -5.14163 | opp_overlap 62171 CCACCAGATGCATAA TGCCAGTCAGTT AAGC AACTGACTGGCA TTTTTGTTCCTGGCT TERM 78 62198 - 62171 - R 100 -17.2 -3.40299 | opp_overlap 62171 CCACCAGATGCATAA TGCCAGTCAGTT AAGC AACTGACTGGCA TTTTTGTTCCTGGCT YEP0090 62963 - 62177 - | transposase for insertion sequence element IS1665 TERM 79 62995 - 62971 - R 91 -5 -5.61596 | opp_overlap 62971 ATGTGCATAAAAAAA TCCGGAAACG AAGAA CATTTCTGGA TTCTTACACAACCAC TERM 80 63012 - 63029 + r 84 -11.3 -3.09635 | opp_overlap 63010, overlap 63022 63023 TCTTACACAACCACT GGATCGG TCAA CCGATCC TTAACTGATCGGCAT YEP0092 64356 - 63019 - | transposase for insertion sequence element IS4 TERM 81 63545 - 63587 + g 75 -7.7 -4.19238 | gap 1, overlap 63522 63546 AGGCGGGCTGTCATT TCAGCCCCCA-GCTCGGG CCACTTTT TCCGGGCCTGTGGGCTGG TTTTCAACTTCACCA TERM 82 64388 - 64364 - H 100 -10.8 -5.61596 | opp_overlap 64364 ATGTGCATAAAAAAA TCCGGAAACG AAGAA CATTTCCGGA TTCTTACACAACCAC TERM 83 64364 - 64388 + H 73 -8.6 -3.61398 | opp_overlap 64364 ATGTGCATAAAAAAA TCCGGAAACG AAGAA CATTTCCGGA TTCTTACACAACCAC TERM 84 64405 - 64422 + H 84 -11.3 -3.09635 | opp_overlap 64403 TCTTACACAACCACT GGATCGG TCAA CCGATCC TTAACTGATCGGCAT TERM 85 64706 - 64689 - H 74 -6.3 -4.41633 | overlap 64690 CAGGTGGAAAAACAA CGCTGAT GGGC ATCAGCA AGCGGGGTGATAAAA TERM 86 64942 - 64918 - H 100 -9.3 -4.67982 | GTTCAGTCAATAAAA GAGCCAACGAA AAA CTCGTCAGCTC AGTTAATTAACACGT TERM 87 65220 - 65202 - H 100 -10.2 -4.55287 | opp_overlap 65202 65213 TTTATGCACAGAAAA CCTCCCGC TAG GCTGGAGG TTCCGTAAAGCTTTC TERM 88 65202 - 65220 + H 77 -10.2 -3.07307 | opp_overlap 65202, overlap 65213 TTTATGCACAGAAAA CCTCCCGC TAG GCTGGAGG TTCCGTAAAGCTTTC tnp 65333 - 65791 + | transposase for IS1541 TERM 89 65869 - 65893 + F 100 -9.9 -4.47786 | opp_overlap 65872, overlap 65871 65872 ATAGGCGCATATGAA AAACCTCCGGC TAT GCCGGAGGATA TTTATTTAACTGATT TERM 90 65871 - 65891 + F 100 -12.5 -3.83744 | opp_overlap 65872, overlap 65869 65872 AGGCGCATATGAAAA ACCTCCGGC TAT GCCGGAGGA TATTTATTTAACTGA TERM 91 65890 - 65872 - f 100 -16 -4.8048 | opp_overlap 65871 65869 65872 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTTAACTG TERM 92 65872 - 65890 + F 100 -16 -2.89523 | opp_overlap 65872, overlap 65871 65869 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTTAACTG TERM 93 66039 - 66020 - g 75 -7.8 -4.21194 | overlap 66021 GTGCATGAGCGAAAA CGTAGGCC GAAA GGCCCACA GAAATCTAATGCTTC YEP0095 65993 - 66238 + | putative plasmid copy number control protein YEP0096 66500 - 66556 + | putative leader peptide RepB repA 66549 - 67571 + | replication initiation protein SEQUENCE gi|123440403|ref|NC_008800.1| Yersinia enterocolitica subsp. enterocolitica 8081, complete genome (length 4615899) YE0001 710 - 270 - | flavodoxin asnC 1263 - 802 - | DNA-binding transcriptional regulator AsnC asnA 1449 - 2441 + | asparagine synthetase AsnA TERM 1 2476 - 2504 + F 100 -13.2 -4.15565 | TCTTTATTATTTCAA CCCGCTATGGCT CATGC AGCGATAGCGGG TTTTAACGTCATAAA YE0004 2595 - 3266 + | hypothetical protein yieM 4742 - 3276 - | hypothetical protein YE0006 6254 - 4746 - | regulatory ATPase RavA TERM 2 5694 - 5706 + g 73 -5.5 -4.63218 | opp_overlap 5694 GCTGAGAAGCAATGA GCGGA AAT TCTGC TTTTCTTGCACGCGA TERM 3 6056 - 6031 - G 71 -4.7 -4.56597 | gap 1 TCCGGTGTCGAAAAA CGGGTCATCAGA TAT TCAAATG-CCCG GGCATTTCTAAAAGC TERM 4 6301 - 6315 + H 73 -3.5 -5.07486 | TTTTTACCTGATCAG GGGGA ATAGA TCCTC TTTTTCTTAGCGGTA TERM 5 6649 - 6670 + H 71 -3 -4.94902 | overlap 6659 ATATTGGTACCAGCC CACTCTAT ACCCTG AGAGAGTG TTTTTCTGGTCATTA trkD 6708 - 8435 + | potassium transport protein Kup TERM 6 8443 - 8462 + F 100 -12.2 -4.67904 | opp_overlap 8443 AGATTTAACTTAGAA GGCCGTTA GACA TAACGGCC TTTTTCACATTCATC TERM 7 8462 - 8443 - f 91 -12.2 -3.43117 | opp_overlap 8443 AGATTTAACTTAGAA GGCCGTTA GACA TAACGGCC TTTTTCACATTCATC TERM 8 8750 - 8765 + G 73 -5.4 -4.63527 | overlap 8740 CTGACTCAAGGCGTC CCTGGA TTCC TTCAGG TTTTTGAGGTGGTAA YE0008 8606 - 9025 + | D-ribose pyranase TERM 9 9203 - 9217 + G 82 -5.6 -5.08824 | opp_overlap 9177 9178 9200 9203, overlap 9177 CATCTACAATAAGGA TGCCGG CAG CCAGCA TTTTTTGGGTAAAGA rbsA 9033 - 10535 + | D-ribose transporter ATP binding protein rbsC 10623 - 11588 + | ribose ABC transporter permease protein prlB 11760 - 12647 + | D-ribose transporter subunit RbsB rbsK 12811 - 13737 + | ribokinase TERM 10 14711 - 14666 - g 79 -11.3 -3.55761 | gap 1, opp_overlap 14677 14679 TATTCATCGGCTAAA TAGCCCGGAAGCG-GAACCACA AGT TCTGATTCTCACTCCCGAGCTA ATCGAGCGCGGATCG rbsR 13740 - 14741 + | transcriptional repressor RbsR YE0013 16162 - 14738 - | putative membrane transport protein TERM 11 16143 - 16110 - G 100 -10.3 -4.55295 | gap 1, overlap 16106 16111 16112 16114 GCCTGCATAAAGAAA GCCATGGCGGCTATCC AAG GGAGACCCGCCATG-C TGCGCGCAGATTTTA TERM 12 16143 - 16111 - G 75 -10.5 -3.32695 | overlap 16106 16110 16112 16114 CCTGCATAAAGAAAG CCATGGCGGCTATCC AAG GGAGACCCGCCATGC TGCGCGCAGATTTTA TERM 13 16142 - 16112 - G 88 -14 -2.59135 | overlap 16106 16110 16111 16114 CTGCATAAAGAAAGC CATGGCGGCTATCC AAG GGAGACCCGCCATG CTGCGCGCAGATTTT TERM 14 16140 - 16114 - G 74 -10.8 -2.82776 | overlap 16106 16112 16110 16111 GCATAAAGAAAGCCA TGGCGGCTATCC AAG GGAGACCCGCCA TGCTGCGCGCAGATT YE0014 16926 - 16237 - | putative GntR-famly transcriptional regulator TERM 15 19120 - 19131 + r 78 -5.8 -4.7497 | ATTGTGTTGTAAGGC CTCG GCAT CGAG TTTTTACTGCATCAG TERM 16 19208 - 19188 - R 100 -11.3 -4.9725 | opp_overlap 19186 ACCTTTACACAAAAA TACTGAATC CAT GATTCAGTA GAAATTTTTGTGTCC TERM 17 19348 - 19385 + r 83 -10.9 -3.45839 | opp_overlap 19348 19347, overlap 19330 TTATGAACTCAAAAG TATCTTAAAGATGACTT TAAC AAGTCGTGTTTAAGATA TTGCTCTTTAACAAT TERM 18 21053 - 21035 - R 82 -10.3 -3.57798 | overlap 21048 CATAAGTAACGATAA TGCGGGT GAAAA ACCCGCA CGCCGGAAGACCAAG TERM 19 21560 - 21549 - R 74 -4.4 -5.06816 | ACTGTTTAATAAAAA CACA GCAC TGTG CAAACACGAAAGTGG TERM 20 22672 - 22682 + r 82 -6.8 -4.78848 | opp_overlap 22672 GGCTTAACCTTACAA CACC AAA GGTG TTTTGTATTTGAGAG TERM 21 22912 - 22946 + r 77 -10.7 -2.87931 | opp_overlap 22912, overlap 22919 CAGGCATCAAATCAA GCCGAGACCCCATGC CAAAA GCGTGGGGTTTTTGC TATGTGGGAAATAAA TERM 22 22919 - 22939 + r 100 -10.4 -4.84527 | opp_overlap 22912, overlap 22912 CAAATCAAGCCGAGA CCCCATGC CAAAA GCGTGGGG TTTTTGCTATGTGGG TERM 23 22999 - 22975 - R 91 -8.5 -4.73341 | overlap 22977 AAAAAACCAAAGAAA GAGCCTTCTGC TGA GCAGAGGGCTG AGGTTAATGACAAAG TERM 24 22997 - 22977 - R 90 -11.1 -3.92649 | overlap 22975 AAAACCAAAGAAAGA GCCTTCTGC TGA GCAGAGGGC TGAGGTTAATGACAA mobB 23721 - 23194 - | molybdopterin-guanine dinucleotide biosynthesis protein B mobA 24317 - 23718 - | molybdopterin-guanine dinucleotide biosynthesis protein A YE0018 24462 - 24731 + | hypothetical protein YE0019 24823 - 25809 + | serine/threonine protein kinase TERM 25 25965 - 25955 - g 80 -8.2 -4.4784 | CAAACGTTAAACAAA CCGG TAA CCGG TGAGCCCCAAGTTTT dsbA 25856 - 26479 + | periplasmic protein disulfide isomerase I TERM 26 26516 - 26491 - f 95 -7.6 -4.9934 | opp_overlap 26491 ATAATAGTATAAAAA GAGGGGCT GGATTTTATT AGCCCCTC TTTCAGTTATCTAAT TERM 27 26491 - 26516 + F 78 -9.1 -3.83724 | gap 1, opp_overlap 26491 ATAATAGTATAAAAA GAGGGGCTGGAT TTT ATT-AGCCCCTC TTTCAGTTATCTAAT TERM 28 28797 - 28808 + G 72 -5.8 -4.35116 | opp_overlap 28796 ACAAGCGCACGAATT GGCT GAAG AGCC TTTTAATCTCGCCTC TERM 29 29128 - 29112 - g 73 -7.3 -4.14392 | TCCTAACTTGCAAAA CATTCCG GTG CGAAATG AAGAGGGGCGTCGTA polA 27070 - 29868 + | DNA polymerase I TERM 30 30008 - 29988 - T 86 -3.3 -5.60689 | opp_overlap 29988, overlap 29981 CTATACAACAAAAAA TTCTTTTGC CCT GCGAAAAAA TGATGTAGAGTTACA TERM 31 30129 - 30099 - T 76 -11.1 -2.62184 | opp_overlap 30101 TTTGGCTGTATATTA GCCGCCCCAGTCA TTTAT TGACTGGGGCGTT TTTTATTGGGCCTTT TERM 32 30101 - 30127 + T 100 -18.1 -5.45652 | opp_overlap 30099 TGGCTGTATATTAGC CGCCCCAGTCA TTTAT TGACTGGGGCG TTTTTTATTGGGCCT TERM 33 30287 - 30272 - T 78 -10.4 -3.34344 | overlap 30254 CCACTTCTGAAGTAA CAGCCC TTGC GGGCTG CACATGGCAACAGGT YE0022 30955 - 30302 - | GTPase EngB TERM 34 31528 - 31580 + H 86 -10 -3.99405 | gap 1, opp_overlap 31518 31543, overlap 31543 GGATATCCTTCCGCA GAAG-GTGCGAAAAAAGGCGACAGG TTAA TCTGCCGCCTTTTTTCTTTCTCTTC TTTCTGCTAGATTCC TERM 35 31543 - 31564 + H 100 -7.9 -5.7827 | opp_overlap 31543, overlap 31528 GAAGGTGCGAAAAAA GGCGACAGG TTAA TCTGCCGCC TTTTTTCTTTCTCTT TERM 36 31564 - 31543 - H 100 -9.4 -5.03145 | opp_overlap 31543 31528 GAAGGTGCGAAAAAA GGCGACAG GTTAAT CTGCCGCC TTTTTTCTTTCTCTT TERM 37 31746 - 31736 - g 71 -4.6 -4.59212 | overlap 31737 31739 31740 AAGCAACCAAATAAA GCAC CAC GCGC TGACCGTGCGGCCCC YE0023 31718 - 32284 + | hypothetical protein hemN 32467 - 33840 + | coproporphyrinogen III oxidase glnG 35401 - 33989 - | nitrogen regulation protein NR(I) TERM 38 34968 - 34951 - G 77 -6.3 -4.64598 | gap 1, opp_overlap 34954, overlap 34954 CAATGATGCGAAAAA CATCCTGC ATC GCAGG-TG CTTCGCCGATGATAT glnL 36458 - 35409 - | nitrogen regulation protein NR(II) TERM 39 35793 - 35816 + g 71 -4.6 -4.63527 | gap 1, opp_overlap 35794, overlap 35794 ACTGGGGTCATAATC ACGGATTAACG TCA CGTTA-TCCGG TTTTTCCAGTGATAC TERM 40 36573 - 36556 - R 100 -9.9 -5.28826 | AAAGTGGAGAAAAAA GCCCATT ATGA AATGGGC TAAAAGTTTCCACGG glnA 38016 - 36607 - | glutamine synthetase TERM 41 37710 - 37700 - G 71 -8.2 -3.64198 | CGTTTAGAGATAGAA CGCG GAT CGCG GTCATAACCTTGCAA YE0028 38311 - 38201 - | hypothetical protein bipA 38529 - 40352 + | putative GTPase TERM 42 40374 - 40398 + F 100 -13.6 -3.54475 | TTGGTTCTGCTGATA CTTAGGGCGC GAAAA GCGCCCTGAG TTCTATCCTCCGCAC TERM 43 40498 - 40516 + F 82 -3 -5.44837 | TAAGTTCACTTGCTG CCTTGTTG CAA CTCCAAGG TTTTTCTATTTTTTT YE0030 40648 - 41235 + | phosphatase TERM 44 41724 - 41738 + G 81 -7.8 -4.564 | TGGCGCAGCAAGGTT CACCGG TCA CTGGTG TTTTCATTTGCCGTT rbn 41328 - 42218 + | ribonuclease BN YE0032 42225 - 42662 + | D-tyrosyl-tRNA deacylase YE0033 42914 - 43837 + | hypothetical protein TERM 45 43846 - 43878 + F 82 -7.8 -4.44245 | overlap 43847 43849 TAACTAATTTTTATT ATGCCCGTTCATTA ATAAC TAATGAGCGGGTAG TTTTGTGAGTCATAT TERM 46 43847 - 43877 + F 86 -11.3 -3.25824 | overlap 43846 43849 AACTAATTTTTATTA TGCCCGTTCATTA ATAAC TAATGAGCGGGTA GTTTTGTGAGTCATA TERM 47 43849 - 43875 + F 84 -11.7 -3.18788 | overlap 43847 43846 CTAATTTTTATTATG CCCGTTCATTA ATAAC TAATGAGCGGG TAGTTTTGTGAGTCA TERM 48 45070 - 45081 + G 73 -2.2 -5.1101 | AAAATTAATAATTAT GTTC CACA GAGC TTTTTTGAATACTCA YE0035 44431 - 45117 + | LuxR family transcription regulatory protein YE0036 45147 - 45833 + | LuxR family transcription regulatory protein YE0037 45863 - 46549 + | LuxR family transcription regulatory protein YE0038 46579 - 47265 + | LuxR family transcription regulatory protein YE0039 47294 - 47980 + | LuxR family transcription regulatory protein TERM 49 47991 - 48024 + T 91 -10.3 -4.19624 | overlap 47992 TGTAGAAGTCTCTTT ACGCCGATTACGTTA TATT TCACGTGATCGGCGG TTTGTGTTCAGAGTC TERM 50 47992 - 48023 + T 100 -13.8 -3.11292 | overlap 47991 GTAGAAGTCTCTTTA CGCCGATTACGTTA TATT TCACGTGATCGGCG GTTTGTGTTCAGAGT TERM 51 48039 - 48065 + T 76 -8 -4.23794 | overlap 48042 GTTTGTGTTCAGAGT CATTGCTGACAA AGC TTGGCAGCACTG TTTATGTTCGCTTAC YE0040 49786 - 48077 - | hypothetical protein TERM 52 49882 - 49907 + r 78 -9.8 -3.54307 | gap 1, opp_overlap 49882 CGAAGCATAAAAAAA TGGCCGGT-GT CATTT ACGACCGGCCA TTTCAACGACGTGTT TERM 53 49907 - 49882 - R 100 -9.8 -5.71983 | gap 1, opp_overlap 49882 CGAAGCATAAAAAAA TGGCCGGT-GT CATTT ACGACCGGCCA TTTCAACGACGTGTT YE0041 51318 - 49933 - | putative membrane permease TERM 54 50227 - 50212 - G 73 -10.4 -3.15249 | GATATGTTGTACGAA CCCAGC GACG GCTGGG AACAAGCCCAGTACA TERM 55 51412 - 51425 + H 71 -2.4 -5.1244 | TTAAATATTTATGCC CATG CTTGTT CATG TTTTTCTATTACTAA gltC 51557 - 52771 + | sodium/glutamate symport carrier protein TERM 56 52810 - 52835 + T 100 -14.8 -3.88583 | opp_overlap 52807, overlap 52813 GTAAGATAATAGTTT TAAGGGGCGG TTTTAT CCGCCCCTTA TTTATCAAGCATTTG TERM 57 52813 - 52832 + T 100 -12.1 -4.06687 | opp_overlap 52807, overlap 52810 AGATAATAGTTTTAA GGGGCGG TTTTAT CCGCCCC TTATTTATCAAGCAT recG 54921 - 52840 - | ATP-dependent DNA helicase RecG TERM 58 53841 - 53853 + g 77 -2.6 -5.27335 | overlap 53832 53837 CTTCTTGTTGTGCCA GGCG CGCCT TGCC TTTTTGTTTCCCAGC spoU 55614 - 54922 - | tRNA guanosine-2'-O-methyltransferase spoT 57722 - 55620 - | bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase TERM 59 55824 - 55838 + g 70 -2.1 -4.87133 | CAGGGCACCTTGCTG GTTGA ACATA TCGAC TTTTATTTCAGCAAT TERM 60 57166 - 57184 + g 73 -4.5 -4.68593 | opp_overlap 57166 TAGAGCGCTTCAAAA CCCAGCT CTTCC AGCTCGG TTTTTAAATGATGAA rpoZ 58016 - 57741 - | DNA-directed RNA polymerase subunit omega gmk 58694 - 58071 - | guanylate kinase TERM 61 58639 - 58627 - G 80 -9.1 -4.15044 | opp_overlap 58623 58627, overlap 58609 TGTGTTTTTAACAAA GCCTG AAT CAGGC TTGATTTCCCTGCCC TERM 62 58627 - 58639 + g 71 -9.1 -3.54408 | opp_overlap 58609 58627, overlap 58623 TGTGTTTTTAACAAA GCCTG AAT CAGGC TTGATTTCCCTGCCC TERM 63 59368 - 59348 - g 80 -4.7 -5.04385 | overlap 59349 59350 GACAGGGCGAAAAAA CCTTTGGGT GCA ACCCAAAAT AGACGGCGTTGCAGT TERM 64 59367 - 59349 - g 71 -8.2 -3.61908 | overlap 59348 59350 ACAGGGCGAAAAAAC CTTTGGGT GCA ACCCAAAA TAGACGGCGTTGCAG ligB 58977 - 60674 + | NAD-dependent DNA ligase LigB TERM 65 60657 - 60691 + T 81 -10.8 -3.36749 | overlap 60658 60662 CAGGGAATTGCGGGA TTCAGCCCCGAAGA ATAGTTA TCTTCGGGGTTGGG TTAATGTTCAGAATG TERM 66 60658 - 60690 + T 83 -12.1 -2.61728 | overlap 60657 60662 AGGGAATTGCGGGAT TCAGCCCCGAAGA ATAGTTA TCTTCGGGGTTGG GTTAATGTTCAGAAT TERM 67 60662 - 60686 + T 86 -11.5 -3.23979 | overlap 60658 60657 AATTGCGGGATTCAG CCCCGAAGA ATAGTTA TCTTCGGGG TTGGGTTAATGTTCA YE0049 61309 - 60692 - | hypothetical protein TERM 68 61471 - 61461 - H 70 -2.6 -4.96435 | TCAATAAAAAAACAA TAAT AGG ATTA CAAACCATTAATAAA YE0050 61529 - 62080 + | hypothetical protein TERM 69 62104 - 62140 + T 75 -10.3 -2.88677 | overlap 62101 62099 62096 ATTGGATTAGAATTT TTGGCCTTTTATCTC CTGATTA GAGGTAAAAGGCCGG TGATATTATTGATTT cru 63360 - 62176 - | nucleoside permease TERM 70 63356 - 63344 - G 90 -7.7 -5.10163 | AATGCCAAAAGAAAA TGCAG AAT CTGCA ACATAAGAAATCCGT YE0052 63619 - 64512 + | enoyl-CoA hydratase YE0053 66532 - 64538 - | RNase II stability modulator TERM 71 64574 - 64603 + g 71 -9.4 -3.59979 | gap 1 GTGTTGCGTTACCAG CCAATGCTC-CAG TTTAT CTGCGGGCATTGG TTTGGCGTAAAGGAA TERM 72 65401 - 65417 + g 74 -10.9 -2.78508 | overlap 65400 65399 65403 CGGTATACATGGCTG TATCCGC ACT GCGGATA ATATTTTCCAGCGTA TERM 73 65679 - 65693 + g 80 -8.6 -4.42765 | opp_overlap 65677 65675 65679 CGATCACCAAACATA TGACCA TAG TGGTCA TTTACTTTTTTGAAG YE0055 67885 - 67055 - | metallo-beta-lactamase superfamily protein TERM 74 68258 - 68243 - R 89 -6.8 -5.34365 | opp_overlap 68243 GCAGAATAATAAAAA CCCAGA CTTC TCCGGG TTTTAGCAAAACGGG YE0057 69150 - 68287 - | hypothetical protein rph 69277 - 69993 + | ribonuclease PH TERM 75 70002 - 70019 + F 100 -11.3 -5.75945 | ACAATAATTGATTTA GGCGACT CGGT AGTCGCC TTTTTTTTACCCGCT pyrE 70145 - 70786 + | orotate phosphoribosyltransferase TERM 76 70827 - 70814 - T 88 -9.5 -4.32048 | opp_overlap 70814 CAAGAATACCCAAAA GGGCC ATTT GGCCC TTTTTATATAATTCA TERM 77 70814 - 70827 + T 100 -9.5 -5.04175 | opp_overlap 70814 CAAGAATACCCAAAA GGGCC ATTT GGCCC TTTTTATATAATTCA TERM 78 70862 - 70847 - T 71 -4 -4.79756 | opp_overlap 70847 TATATAATTCAAAAA CTCAAC TTAA ATTGAG TTTATTGGAGCTGAG slmA 71460 - 70864 - | nucleoid occlusion protein TERM 79 71197 - 71214 + g 77 -4.8 -4.87626 | TAGCAGGATCAGCCG GAGGCG ATTAAA CGTCTC TTTTTCATCTTGCAG dut 72036 - 71581 - | deoxyuridine 5'-triphosphate nucleotidohydrolase dfp 73204 - 72017 - | bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase TERM 80 72332 - 72352 + g 100 -6.1 -6.14618 | opp_overlap 72334, overlap 72322 72334 ATTTTTCACCAACTT AAGGGTGAT CTC ATCGCCCTG TTTTTTTATTTTCTC TERM 81 72334 - 72350 + g 88 -8.7 -4.67109 | opp_overlap 72334, overlap 72322 72332 TTTTCACCAACTTAA GGGTGAT CTC ATCGCCC TGTTTTTTTATTTTC TERM 82 73513 - 73529 + G 71 -2.9 -4.87665 | overlap 73508 73515 73516 TGCAGTACTGACGGA TGCCGAG TTG CTCGCTA TTTTTCTGCGTACAG radC 73442 - 74110 + | DNA repair protein RadC rpmB 74374 - 74610 + | 50S ribosomal protein L28 rpmG 74622 - 74789 + | 50S ribosomal protein L33 TERM 83 74802 - 74775 - f 73 -7.2 -4.09117 | opp_overlap 74776 74782, overlap 74776 74782 GTGATCTATAAAGAA GCCAAAATTAAA TAAT TTTAATTTTGGT GGATTAAGAAAACCC TERM 84 74776 - 74801 + F 76 -10.7 -2.52464 | opp_overlap 74776 74775 74782, overlap 74782 TGATCTATAAAGAAG CCAAAATTAAA TAAT TTTAATTTTGG TGGATTAAGAAAACC TERM 85 74801 - 74776 - f 79 -10.7 -3.04988 | opp_overlap 74776 74782, overlap 74775 74782 TGATCTATAAAGAAG CCAAAATTAAA TAAT TTTAATTTTGG TGGATTAAGAAAACC TERM 86 74807 - 74837 + F 91 -12.1 -3.50393 | gap 1, opp_overlap 74810 74815, overlap 74815 TTAATTTTGGTGGAT TAAGAAAACCCGGC CTCG GCCGGGTTTT-TTA TTATATAAAGTCCAG TERM 87 74835 - 74810 - f 86 -11.9 -3.14211 | opp_overlap 74807 74815, overlap 74815 ATTTTGGTGGATTAA GAAAACCCGGC CTCG GCCGGGTTTTT TATTATATAAAGTCC TERM 88 74815 - 74830 + F 100 -11.8 -5.60689 | opp_overlap 74810 74815, overlap 74807 GGTGGATTAAGAAAA CCCGGC CTCG GCCGGG TTTTTTATTATATAA TERM 89 74830 - 74815 - f 100 -11.8 -4.71426 | opp_overlap 74815 74807, overlap 74810 GGTGGATTAAGAAAA CCCGGC CTCG GCCGGG TTTTTTATTATATAA TERM 90 75504 - 75531 + G 74 -2.6 -5.0538 | overlap 75506 TGTTATTGCACTCTA TTGAGCAGGGTG GCAC CACATTGCGCGA TTTTTTACAGTCAGA fpg 74876 - 75685 + | formamidopyrimidine-DNA glycosylase coaD 76271 - 75792 - | phosphopantetheine adenylyltransferase kdtX 77050 - 76268 - | lipopolysaccharide core biosynthesis glycosyl transferase TERM 91 76712 - 76700 - G 71 -4.8 -4.61527 | overlap 76703 AAAACGGCCTAAAAA CAGG TTCCG CCTG GCGCAGCTATAAACT kdtA 78328 - 77051 - | 3-deoxy-D-manno-octulosonic-acid transferase TERM 92 78772 - 78803 + r 100 -20.4 -3.37622 | opp_overlap 78775, overlap 78775 TTTGAATGTCGAGAC CAATCGGCTTCGAT AATT ATCGAAGCCGATTG TTATCAGTAAATGTT TERM 93 78775 - 78800 + r 100 -16.3 -3.82378 | opp_overlap 78775, overlap 78772 GAATGTCGAGACCAA TCGGCTTCGAT AATT ATCGAAGCCGA TTGTTATCAGTAAAT TERM 94 78800 - 78775 - R 100 -16.3 -3.26947 | opp_overlap 78775 78772 GAATGTCGAGACCAA TCGGCTTCGAT AATT ATCGAAGCCGA TTGTTATCAGTAAAT rfa-2 79834 - 78869 - | ADP-heptose:LPS heptosyl transferase I rfaF 80898 - 79834 - | ADP-heptose:LPS heptosyltransferase II TERM 95 80734 - 80712 - G 77 -4.1 -5.0925 | gap 1 CCTCAAAAGCAAAAA CCCCATGACC TAAC GG-CATCGGG ACGGCATGGCGAACT rfaD 81861 - 80929 - | ADP-L-glycero-D-mannoheptose-6-epimerase TERM 96 82214 - 82191 - g 88 -8.2 -4.83169 | AGGGCTGTATAAAAA TGAGCGGA TCATCACT TCCGCTCA GCAAGCAGACATTGC kbl 82105 - 83316 + | 2-amino-3-ketobutyrate coenzyme A ligase TERM 97 83791 - 83816 + G 72 -10.5 -3.08036 | overlap 83791 83793 ATTTTTGATCCCTTC GGTAATGCGGT TCAC ACCGCGTTATC CTTTGATTTAGTTGG TERM 98 83791 - 83817 + G 75 -8.1 -4.14598 | gap 1, overlap 83791 83793 ATTTTTGATCCCTTC GG-TAATGCGGT TCAC ACCGCGTTATCC TTTGATTTAGTTGGG tdh 83341 - 84366 + | L-threonine 3-dehydrogenase TERM 99 84554 - 84526 - T 81 -9.6 -3.84246 | opp_overlap 84527 84528, overlap 84527 GTTGCAAGGATGAAA GCGAGGCAGTCA GGTGA TGACTGCCTCAT TTTTACGGATTTTCA TERM 100 84553 - 84527 - T 91 -13.1 -2.90227 | opp_overlap 84527 84528, overlap 84526 TTGCAAGGATGAAAG CGAGGCAGTCA GGTGA TGACTGCCTCA TTTTTACGGATTTTC TERM 101 84527 - 84553 + T 100 -10.9 -4.66264 | opp_overlap 84526 84527, overlap 84528 TTGCAAGGATGAAAG CGAGGCAGTCA GGTGA TGACTGCCTCA TTTTTACGGATTTTC TERM 102 84528 - 84552 + T 100 -14.4 -3.38674 | opp_overlap 84527 84526, overlap 84527 TGCAAGGATGAAAGC GAGGCAGTCA GGTGA TGACTGCCTC ATTTTTACGGATTTT YE0075 85582 - 84557 - | hypothetical protein YE0076 86760 - 85606 - | hypothetical protein TERM 103 86683 - 86703 + g 77 -3.9 -5.1356 | opp_overlap 86693, overlap 86685 TTGTTTCAACTGATC GAGCAAGGC ACT GCGTTGCTG TTTTTGTTGCTGAAC TERM 104 86685 - 86701 + g 71 -6.5 -4.19587 | opp_overlap 86693, overlap 86683 GTTTCAACTGATCGA GCAAGGC ACT GCGTTGC TGTTTTTGTTGCTGA TERM 105 86856 - 86830 - R 100 -14.5 -3.97139 | TAATGGCAACAACAA TACGCCAGCGC AAAAA ACGCTGGCGTA CAGTGCTGACCACGG YE0077 88530 - 86983 - | phosphoglyceromutase YE0078 88772 - 89206 + | hypothetical protein TERM 106 89479 - 89499 + G 85 -11.8 -3.68827 | ACGCCCTGGATGCGC GCGGCGGG CTTGA CCCGCTGC TTTAACTCGTCAGTG grxC 89256 - 89504 + | glutaredoxin 3 secB 89596 - 90066 + | preprotein translocase subunit SecB gpsA 90066 - 91085 + | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase TERM 107 91161 - 91187 + F 74 -8 -4.06419 | GGTACAAGGGCGTTA GTCGCTTCGG TCGTTCC CCGAAGTGGC TTGTTTATGGGCAGG TERM 108 91268 - 91296 + G 79 -2.4 -5.52384 | gap 1, opp_overlap 91259 TCAGAAGCGAGAGCA CTGGCCGAGTGTG AACC CATGCT-GGCAAG TTTTTTTCATGCGAC cysE 91211 - 92032 + | serine acetyltransferase TERM 109 92154 - 92164 + T 71 -2.4 -5.13741 | GACGCCAATGACTTT GGGG ATA CACC TTTTTATTGAGTTGC YE0083 92716 - 92213 - | putative methyltransferase TERM 110 92965 - 92975 + H 76 -6.8 -4.56367 | opp_overlap 92962 92964 ACCGTGATAAAACCG CCGA TGG TCGG TTTGTTTATGCGGTG YE0084 92988 - 93986 + | bifunctional regulatory protein/DNA repair protein TERM 111 94049 - 94006 - T 93 -13.3 -2.85351 | gap 1, opp_overlap 94001 CTTGTCGAGATGATA CCTTGCGCACTTGGCATTGC AGCTA ACAA-GCCAGGTGCGCAAGA AGCGTATTAAACTTT cpxA 95432 - 94056 - | two-component sensor protein TERM 112 95192 - 95202 + g 71 -6.8 -4.18018 | CTAAATGTTGACCCG GTGG CGC CCAC TTTTCGATGGCGCGA cpxR 96127 - 95429 - | DNA-binding transcriptional regulator CpxR cpxP 96348 - 96812 + | periplasmic stress adaptor protein CpxP TERM 113 96867 - 96885 + F 100 -14.6 -6.02914 | CCATCCCTGTCTTTC GCCCTCCA TGA TGGAGGGC TTTTTTTTGTCTCAA fieF 96944 - 97846 + | ferrous iron efflux protein F pfkA 98096 - 99091 + | 6-phosphofructokinase TERM 114 99096 - 99083 - T 78 -5.3 -5.04385 | opp_overlap 99083 GACACGGCGAAAAAA CTGTT CTAA AACAG TTAATAGCCCGAAAA TERM 115 99133 - 99160 + T 100 -17.2 -5.14163 | CTCCGCTAGCGGTAA TGCCAGTCAGTT AAGC AACTGACTGGCA TTTTTGTTCCTGGCT YE0090 100473 - 99139 - | transposase for insertion sequence element IS1660 TERM 116 99662 - 99704 + g 75 -7.7 -4.19238 | gap 1, overlap 99639 99663 AGGCGGGCTGTCATT TCAGCCCCCA-GCTCGGG CCACTTTT TCCGGGCCTGTGGGCTGG TTTTCAACTTCACCA TERM 117 100481 - 100505 + H 73 -8.6 -3.61398 | opp_overlap 100481 ATGTGCATAAAAAAA TCCGGAAACG AAGAA CATTTCCGGA TTCTTACACAACCAC TERM 118 100505 - 100481 - H 100 -10.8 -5.61596 | opp_overlap 100481 ATGTGCATAAAAAAA TCCGGAAACG AAGAA CATTTCCGGA TTCTTACACAACCAC TERM 119 100522 - 100539 + H 84 -11.3 -3.09635 | opp_overlap 100520 TCTTACACAACCACT GGATCGG TCAA CCGATCC TTAACTGATCGGCAT sbp1 100712 - 101701 + | sulfate transporter subunit TERM 120 101750 - 101777 + F 100 -14.2 -4.90302 | opp_overlap 101746 GCAGTAGTAGACTCA GCGCCCGTAAGT TAAT GCTTATGGGCGC TTTGTTTTATTGGTC YE0092 101902 - 102093 + | hypothetical protein TERM 121 102293 - 102271 - T 100 -9.1 -5.60689 | opp_overlap 102271 GCAGATAATAAAAAA GCCGGAGCA TCATC TGCCCCAGC TTAATCAGTAGCTTA TERM 122 102337 - 102371 + T 100 -14.3 -3.68351 | opp_overlap 102357, overlap 102331 102331 GCTTTTTTAGCTGCT GCGGCTGCTTTCACG ATAAC CGCGAAAGCATCCGC TTTCAGTGATGCACC tpiA 103085 - 102318 - | triosephosphate isomerase YE0094 103798 - 103214 - | hypothetical protein TERM 123 104029 - 103998 - H 78 -9.4 -3.63515 | opp_overlap 103998 103997 103995 104027 GGCTACGCTCAATAA CCCGAAGCACTTAC TTAT GTAAGCTCATCGGG ATTATCTCCTTTACT YE0095 104103 - 104537 + | hypothetical protein TERM 124 104562 - 104576 + T 95 -12.8 -2.93723 | opp_overlap 104557, overlap 104557 TTTAATAAAGTCTGA GGGCGC GAT GCGCCC TGTGGTTAATGACAA TERM 125 104744 - 104758 + T 95 -12.8 -3.12999 | TTGTCAGCAGTCTGA GGGCGC GAT GCGCCC TTGAATATAAGGTAC fpr 105526 - 104780 - | ferredoxin-NADP reductase TERM 126 105867 - 105855 - g 71 -2.7 -4.93898 | AGATTATGAGAAAAA TAGAA AAT TTCCA CCTGCTGGTAATGTT TERM 127 106323 - 106349 + G 71 -2.8 -4.85918 | overlap 106305 106306 106331 TGGCAAGCCTGTTTG GCTGGCGTGCAT GCT ATGCTTTCCTGC TTTTCTTATGTGGTG emrD 105845 - 107029 + | multidrug resistance protein D TERM 128 107054 - 107079 + T 100 -11.2 -4.75308 | opp_overlap 107054 107053 GATATAGAACTAAAG CGGGTGCGAT TTAAAT ATTGCACCCG TTTTTACGTATTGCT glpX 108125 - 107115 - | fructose 1,6-bisphosphatase II TERM 129 108240 - 108265 + r 86 -12.6 -2.54896 | opp_overlap 108240, overlap 108236 TTTTCACCATAAAAA CGCCCCATCG GGGGAG TGATGGGGCG TCGATTGCATAAAAC TERM 130 108265 - 108240 - R 100 -11.9 -4.91109 | opp_overlap 108240 108236 TTTTCACCATAAAAA CGCCCCATC GGGGGAGT GATGGGGCG TCGATTGCATAAAAC glpK 109830 - 108307 - | glycerol kinase TERM 131 108337 - 108348 + g 73 -7.2 -4.17132 | TTCCCATGCTTGGGC GCGG GCCA CCGC TTTCTTCCAGCCTTT TERM 132 109014 - 109024 + g 75 -3.2 -5.09426 | GCAGGAAGCAGCCGG TACC GTA GGTG TTTTTTGCCATTCCC glpF 110755 - 109907 - | glycerol uptake facilitator protein TERM 133 111204 - 111188 - H 70 -8 -3.65542 | opp_overlap 111187 111188 111190 GGGACGTCTAAAATA GAGTGC TTGTT GCACTC GTTTGATGGATATAT YE0101 111350 - 111589 + | hypothetical protein TERM 134 111669 - 111692 + T 88 -11.1 -3.87346 | opp_overlap 111669 AGTTTGAAGTGCAAA TAGGGCGAT ATCAAC ATCGCCCTA TTTAATAATTATCAT TERM 135 111692 - 111669 - T 93 -11.8 -3.66356 | opp_overlap 111669 AGTTTGAAGTGCAAA TAGGGCGATA TCAA CATCGCCCTA TTTAATAATTATCAT menG 112211 - 111726 - | ribonuclease activity regulator protein RraA menA 113196 - 112342 - | 1,4-dihydroxy-2-naphthoate octaprenyltransferase TERM 136 113382 - 113352 - R 100 -22.8 -4.95758 | opp_overlap 113355 ATCATACGATAAAAA TAAGAGTGGGAGGC AGC GCCTCCCACTCTTA ATTGGCGAACCATTT TERM 137 113355 - 113379 + r 100 -20.1 -3.33696 | opp_overlap 113352 ATACGATAAAAATAA GAGTGGGAGGC AGC GCCTCCCACTC TTAATTGGCGAACCA hslU 114755 - 113424 - | ATP-dependent protease ATP-binding subunit hslV 115334 - 114810 - | ATP-dependent protease peptidase subunit TERM 138 115365 - 115396 + r 77 -10.2 -3.11326 | opp_overlap 115363 GCAGACTGAATGAGT CCCCATACTGAATT CAGA AAAACAGTATGGGG TATATTGAGATTATA ftsN 116297 - 115434 - | cell division protein FtsN cytR 117391 - 116363 - | DNA-binding transcriptional regulator CytR priA 119820 - 117622 - | primosome assembly protein PriA TERM 139 118132 - 118102 - G 71 -9 -3.56594 | GTAAAGCTGCGCAAA GCGCTCGGCAGA ACGGAAA TCTGCCGAGAAC AGCGCGCCATCGACA TERM 140 119092 - 119073 - G 80 -9.2 -4.2828 | overlap 119074 TTTCAGGGACTAAAA CCAGGGCC TGAC GGCCCTGC GCCAGAATATTTTCC TERM 141 119091 - 119074 - G 84 -12.7 -3.16647 | overlap 119073 TTCAGGGACTAAAAC CAGGGCC TGAC GGCCCTG CGCCAGAATATTTTC rpmE 120213 - 120431 + | 50S ribosomal protein L31 TERM 142 120453 - 120466 + T 90 -5.9 -5.42514 | opp_overlap 120453, overlap 120446 GTCAGACGAAAAAAA GGCCT CCAG GGGCC TTTTTTCATTTCTAC TERM 143 120466 - 120453 - T 91 -5.2 -5.58454 | opp_overlap 120453 120446 GTCAGACGAAAAAAA GGCC TCCAGG GGCC TTTTTTCATTTCTAC metJ 120838 - 120521 - | transcriptional repressor protein MetJ TERM 144 121555 - 121573 + G 71 -6.6 -4.15044 | TAGCTTAAGCAAACG CGGCGCCT ATC GGGTGCTG TTTGTTGACCAAGGC metB 121214 - 122371 + | cystathionine gamma-synthase TERM 145 122561 - 122546 - g 78 -9 -3.99324 | GGGTAGCACCACAAA CCAGCT GATT AGCTGG TTGAAGCTTAGTCAA metL 122379 - 124814 + | bifunctional aspartate kinase II/homoserine dehydrogenase II TERM 146 124882 - 124852 - T 80 -9.1 -4.06491 | opp_overlap 124851 124856, overlap 124856 TTAATTTGAGATAAA CAAATGCCCGA GGTGATTAA TCGGGCATCTG CTGTACTTATTACTT TERM 147 124878 - 124856 - T 77 -6.3 -4.62441 | opp_overlap 124856 124851, overlap 124852 TTTGAGATAAACAAA TGCCCGA GGTGATTAA TCGGGCA TCTGCTGTACTTATT YE0113 127000 - 124892 - | hypothetical protein TERM 148 125920 - 125932 + g 79 -3.4 -5.31519 | TAAAGATATTGTCTT GCAA ATTTA TTGC TTTTTCTTTAAGTAT TERM 149 126136 - 126150 + g 74 -4.3 -4.86731 | TTTTCCCTTTATTCA TACAG ATATA CTGTA TTTTCTTTAAAAACC TERM 150 126769 - 126785 + g 70 -2.3 -4.93296 | opp_overlap 126769 ATACTCTGTCATCAA CATCAAT GAA ATTAATG TTTTTGTCATCATAA TERM 151 126915 - 126925 + g 79 -3.2 -5.23943 | GATAAACGGAATCGA GTGT CTG GCAC TTTATTTTTTTGATA TERM 152 127270 - 127253 - H 79 -8.5 -4.22346 | opp_overlap 127253 TAAACTTATTTAAAA GTTGACT CTTT AGTCAAC TTCGGTCATTTTCTA metF 127374 - 128258 + | 5,10-methylenetetrahydrofolate reductase TERM 153 128676 - 128658 - g 73 -2.5 -5.13344 | ACATCAAGAGAAAAA TACGTTA TGCGC TAACATA CAGAAAGTCGAAAAT TERM 154 129748 - 129732 - g 76 -10.9 -3.24925 | AGGCTATACCATTAA GCTCAAC GAA GTTGAGC AAGATACTAAGGCTA YE0115 128578 - 129780 + | hypothetical protein TERM 155 129807 - 129831 + T 77 -8.6 -3.93768 | opp_overlap 129812, overlap 129812 ATGTTTTTATTATAA AAAAACGGGC GCCTG GCCCGTTTTG TCTTTTATTCACGAT TERM 156 129826 - 129812 - T 100 -8.5 -5.67063 | opp_overlap 129807 129812 TTTATTATAAAAAAA CGGGC GCCTG GCCCG TTTTGTCTTTTATTC TERM 157 129812 - 129826 + T 100 -8.5 -4.98103 | opp_overlap 129812, overlap 129807 TTTATTATAAAAAAA CGGGC GCCTG GCCCG TTTTGTCTTTTATTC glu 132500 - 129861 - | phosphoenolpyruvate carboxylase TERM 158 132794 - 132812 + r 74 -9.6 -3.31248 | opp_overlap 132794 132793 AATTTAATTACCAAG GCCAGATT ATC AGTCTGGC TTATCGGCAATATTG argE 134032 - 132848 - | acetylornithine deacetylase argC 134395 - 135399 + | N-acetyl-gamma-glutamyl-phosphate reductase TERM 159 135685 - 135663 - g 100 -11.2 -5.06414 | GGTGGTGAAGAAAAA CGGCCTGCGT GTG ACGCCAGCCG ATCAAATTGACATTA argB 135487 - 136251 + | acetylglutamate kinase TERM 160 136357 - 136336 - f 95 -13.1 -3.18681 | GCTCAACGGGATTAA TGAGCCTCA TCCT TGAGGCTCA CCCTGCGGGCTAGCA TERM 161 137357 - 137343 - g 90 -5.7 -5.45802 | opp_overlap 137343 137342 GCCGCAAAAGAAAAA TCCAG ATGCG CTGGA ATTAATCCGTGGGAA argH 136489 - 137862 + | argininosuccinate lyase TERM 162 137890 - 137912 + F 100 -14.9 -4.32482 | overlap 137884 TGGTTAATGTTGCGG CGGGCCACA ATTAA TGTGGCCCG TTTTGCGTTATAAAT TERM 163 138383 - 138396 + F 70 -2.5 -4.93296 | opp_overlap 138383 TGAACGGCTAATAAT TAATA GATT TATTA TTTTTATACTAATAA TERM 164 140304 - 140288 - g 95 -13.7 -3.92324 | opp_overlap 140286 140285 CTGTCCAAGACTAAA CCGCTGC ATG GCAGCGG GGATTTTACCAATGC YE0122 138584 - 140911 + | putative TonB dependent receptor protein TERM 165 140991 - 141008 + F 73 -8.5 -3.63645 | overlap 140989 TCATCTGTAGTCGCG TGACTCA ATGA TGAGTCA TATTATTGTTGTTAA YE0123 141014 - 141649 + | hemophore HasA YE0124 141797 - 142450 + | hemophore YE0125 142509 - 143150 + | hemophore YE0126 143211 - 143819 + | hemophore TERM 166 144368 - 144356 - g 81 -7.7 -4.62471 | CTTAATGGTCAAAAA GTGCA AGC TGCAC AGGCGTTAAACGATC TERM 167 144501 - 144515 + G 75 -3.4 -5.09245 | overlap 144503 GGCTCGGGGCATTGG CAGCTC TGG GGGCGG TTTTTCTGATTTTCC YE0127 144005 - 145786 + | ABC transporter protein TERM 168 147049 - 147060 + G 71 -4.4 -4.82901 | opp_overlap 147021 AAATTCGGCCCGGTA TGTC AGTC GACA TTTTTATCCGAACAG YE0128 145917 - 147149 + | HlyD family secretion protein YE0129 147226 - 148026 + | hypothetical protein TERM 169 148091 - 148075 - T 90 -5.7 -5.43621 | overlap 148077 148086 ATAAAGGATAAAAAA CCGGGCA TAA CGCCCTG AGGGATCCCCACAAA tpn1330 149307 - 148114 - | transposase for IS1330 TERM 170 148224 - 148191 - G 74 -11.1 -3.02144 | opp_overlap 148199 148202 CTATTCGTCGCAATA TTAGCGGAGAGTGTC TTAA GACATTCTCTGCTAA CGTCAGATAAGATAT YE0131 150870 - 149422 - | dihydrolipoamide dehydrogenase TERM 171 150530 - 150518 - G 73 -4.7 -4.71426 | opp_overlap 150519, overlap 150519 TTGTCATCAATAAAA TGGGC ATA GCCCT GAATTTTGTCATTAG TERM 172 150913 - 150894 - R 100 -7.8 -5.30189 | overlap 150895 CATAACAGGAAAAAA GGGTAGGC CGAA GCCTACCA AGCATACCCTTCGTA TERM 173 150912 - 150895 - R 95 -11.3 -3.76487 | overlap 150894 ATAACAGGAAAAAAG GGTAGGC CGAA GCCTACC AAGCATACCCTTCGT YE0132 151801 - 151070 - | putative peroxiredoxin/glutaredoxin family protein oxyR 151949 - 152881 + | DNA-binding transcriptional regulator OxyR sth 154264 - 152864 - | soluble pyridine nucleotide transhydrogenase TERM 174 152927 - 152971 + g 80 -6.5 -4.75372 | opp_overlap 152944, overlap 152930 152933 TGCCATAGTTGGATA GTTGAAGGTAGTATTAACGAA GTA TTCGATAGTATTGCCTTCTCC TTTTTGCTCCATGAT TERM 175 152930 - 152968 + g 78 -11.2 -3.28873 | opp_overlap 152944, overlap 152927 152933 CATAGTTGGATAGTT GAAGGTAGTATTAACGAA GTA TTCGATAGTATTGCCTTC TCCTTTTTGCTCCAT TERM 176 154599 - 154621 + G 71 -2.7 -4.86033 | gap 2, overlap 154601 154603 CGGGAGGTCTCCCGT GAGG-CGG-GC ATT GCACCGACTTC TTTTTATCGGCATTT YE0135 154470 - 155114 + | DNA-binding transcriptional repressor FabR yijD 155245 - 155607 + | hypothetical protein TERM 177 155661 - 155635 - T 93 -12.4 -3.14602 | opp_overlap 155639, overlap 155639 TTTATTGCACCAATA GAAAGGGCAACA CCG CGTTACCCTTTC AGACTGCTGACAAAG TERM 178 155657 - 155639 - T 73 -7.4 -4.23674 | opp_overlap 155639, overlap 155635 TTGCACCAATAGAAA GGGCAACA CCG CGTTACCC TTTCAGACTGCTGAC TERM 179 155812 - 155794 - T 84 -11 -3.68244 | opp_overlap 155794, overlap 155787 ATCATTAAGCTCAAA GGGCAACA CCG CGTTGCCC TTTTTTTGTCTCGAT TERM 180 155794 - 155812 + T 100 -10.3 -5.72616 | opp_overlap 155787 155794 ATCATTAAGCTCAAA GGGCAAC ACCGC GTTGCCC TTTTTTTGTCTCGAT trmA 156943 - 155840 - | tRNA (uracil-5-)-methyltransferase TERM 181 156604 - 156578 - G 71 -9.4 -3.49475 | overlap 156582 TGGACGGTGATACAA CAAAGTGGCGAG CAG CTTGCCACTTAG GGTAGATAAGTAATC TERM 182 156600 - 156582 - G 80 -8.8 -4.38927 | overlap 156578 CGGTGATACAACAAA GTGGCGAG CAG CTTGCCAC TTAGGGTAGATAAGT TERM 183 157334 - 157344 + H 71 -8.2 -3.51234 | overlap 157333 ACCGGCCATGGCTCT GCGG CAT CCGC TATTTGAGTTTGGAT btuB 157369 - 159267 + | vitamin B12/cobalamin outer membrane transporter dga 159212 - 160075 + | glutamate racemase TERM 184 164120 - 164102 - f 82 -10.3 -3.57798 | overlap 164115 CATAAGTAACGATAA TGCGGGT GAAAA ACCCGCA CGCCGGAAGACCAAG TERM 185 164627 - 164616 - f 74 -4.4 -5.06816 | ACTGTTTAATAAAAA CACA GCAC TGTG CAAACACGAAAGTGG TERM 186 165739 - 165749 + F 74 -6.8 -4.35524 | opp_overlap 165739 GGCTTAACCTTACAA CACC AAA GGTG TTTTGAATTTGAGAG TERM 187 166177 - 166204 + F 95 -12.9 -3.08349 | opp_overlap 166177, overlap 166169 CGCCACTTATTTAAA TTATGCCTGCT TATTTT AGCAGGCATAA TGTTAAGCGTTATTT TERM 188 166204 - 166177 - f 100 -12.9 -3.6682 | opp_overlap 166177 166169 CGCCACTTATTTAAA TTATGCCTGCT TATTTT AGCAGGCATAA TGTTAAGCGTTATTT TERM 189 166324 - 166305 - f 85 -9.2 -4.14627 | opp_overlap 166305 CTGCCATATAAATAA CCCTTCGC GAAA GCGAGGGG TTTTTTTATGTCGAA TERM 190 166305 - 166324 + F 100 -11.4 -5.71712 | opp_overlap 166305 CTGCCATATAAATAA CCCTTCGC GAAA GCGAGGGG TTTTTTTATGTCGAA YE0141 166814 - 167770 + | putative periplasmic protein precursor TERM 191 167778 - 167795 + F 93 -12.7 -2.97171 | opp_overlap 167778, overlap 167775 GTTATTGATTTAAAA GGCGGGA TTTG TCCCGCC TGCTTTCGTCACCTG TERM 192 167795 - 167778 - f 100 -12.7 -4.19817 | opp_overlap 167778 167775 GTTATTGATTTAAAA GGCGGGA TTTG TCCCGCC TGCTTTCGTCACCTG YE0142 167855 - 169345 + | putative sugar transport system ATP-binding protein TERM 193 169466 - 169482 + G 70 -2.2 -4.92314 | TTTTATTGATTGATA GTTTGG TAGCT CCACAC TTTTTCTCAATTCAT YE0143 169357 - 170376 + | putative sugar transport system permease YE0144 170376 - 171344 + | inner membrane ABC transporter permease protein YjfF YE0145 172236 - 171355 - | transcriptional regulator HdfR YE0146 172356 - 172694 + | hypothetical protein TERM 194 172762 - 172808 + T 75 -7.5 -4.38712 | gap 1, opp_overlap 172778, overlap 172778 TGATATTGGGTATAA GCATCGTGGTAAAAAAGGGGAC TTTG GTTCCCTTTTTTAC-ATTAGGC TTTTGTGCAACTGCG TERM 195 172778 - 172793 + T 88 -6.8 -5.15969 | opp_overlap 172778, overlap 172762 CATCGTGGTAAAAAA GGGGAC TTTG GTTCCC TTTTTTACATTAGGC TERM 196 172793 - 172778 - T 77 -4.6 -5.0133 | opp_overlap 172762 172778 CATCGTGGTAAAAAA GGGGAC TTTG GTTCCC TTTTTTACATTAGGC YE0147 174321 - 172798 - | putative magnesium chelatase family protein TERM 197 173442 - 173427 - G 73 -3.2 -4.87665 | opp_overlap 173433 GTTCATCCAGAAAAA GAACAC CATT GTGTGC CAGTGATATTTCACC TERM 198 174800 - 174777 - H 100 -13.8 -3.69069 | opp_overlap 174777 TTAATCTCAAGAGAA CCCCCGCACC GAAA GGTCCGGGGG TTTTTTATTGGTCGG TERM 199 174777 - 174800 + H 100 -13.8 -5.5112 | opp_overlap 174777 TTAATCTCAAGAGAA CCCCCGCACC GAAA GGTCCGGGGG TTTTTTATTGGTCGG TERM 200 175776 - 175759 - g 71 -4.1 -4.67038 | overlap 175761 GCCGCAAAAGCAAAA GTTATCC ATAT GGATATC GACCCGGCTGAATTG TERM 201 175919 - 175909 - g 71 -6.8 -4.18908 | opp_overlap 175906 ATAGCCTTAAAACAA CAGC ATA GCTG GCGTTATGACCACCC TERM 202 176020 - 175987 - g 74 -9.5 -3.60098 | gap 1, overlap 175973 ATCTCTGATCGCAAA GCGCCACAGACGGTAG TCA CCACCGAC-GTGGGGC AGCACCAGATGTGGA TERM 203 176278 - 176292 + G 77 -4.2 -5.14965 | TTGGGTATGGTTCGA CAGTGG CAG CAACTG TTTTTTGATGGGCGT ilvG 174892 - 176538 + | acetolactate synthase 2 catalytic subunit ilvM 176535 - 176792 + | acetolactate synthase 2 regulatory subunit TERM 204 176998 - 176982 - g 74 -10.9 -3.04144 | overlap 176984 CCGTCACCGCGAACA CATGCAG CGC CTGCATG ACTCAGCCAAAATTT ilvE 176815 - 177741 + | branched-chain amino acid aminotransferase ilvD 177853 - 179703 + | dihydroxy-acid dehydratase TERM 205 179751 - 179734 - g 84 -12.7 -3.17219 | opp_overlap 179732 CACAACCCTTATCAA CTGCCCC CGAT GGGGCAG AATATCTGCGGGCGA TERM 206 180756 - 180769 + G 70 -2.3 -4.92314 | opp_overlap 180756 180757, overlap 180750 180757 ATCCCAGAGCAAAAA GGCAG TTTC CTGCG TTTTTGTGAGTTGCT ilvA 179709 - 181253 + | threonine dehydratase TERM 207 181285 - 181332 + F 74 -8 -4.01493 | opp_overlap 181299 ACTTATTCTTATTCG TACTAATAAAAAAACCAGAG CCAATAAT CTCTGGGTTTTTTATTGGCA TTTACTGTCTTTTAT TERM 208 181318 - 181299 - f 95 -5 -5.84381 | opp_overlap 181285 GTACTAATAAAAAAA CCAGAG CCAATAAT CTCTGG GTTTTTTATTGGCAT TERM 209 181920 - 181902 - g 93 -11.8 -4.32402 | overlap 181899 CCCGAACCAAAATAA TGCCCAAT TCC ATTGGGCA AATAACTAAATCTCA YE0153 181439 - 182935 + | hypothetical protein ilvY 183818 - 182937 - | DNA-binding transcriptional regulator IlvY TERM 210 182981 - 182967 - G 82 -11.4 -3.35088 | opp_overlap 182967 AAATGCTTCAATCAA CGGCTC ATT GAGCCG TTTTTTCTGCACGCA TERM 211 182967 - 182981 + g 100 -11.4 -5.24129 | opp_overlap 182967 AAATGCTTCAATCAA CGGCTC ATT GAGCCG TTTTTTCTGCACGCA TERM 212 183693 - 183678 - G 71 -4.6 -4.58663 | opp_overlap 183686 ATTATCGCGTAAAAA CAGCGG TTGG CCGATG GTCTCTTCCAGACGC ilvC 184071 - 185549 + | ketol-acid reductoisomerase TERM 213 185581 - 185600 + T 100 -8.5 -5.56673 | opp_overlap 185581 GTTATTTGATATTAA GCCTCCC AGTGAC GGGGGGC TTTTTTATTGTCAAT TERM 214 185643 - 185622 - T 75 -8.7 -3.66356 | opp_overlap 185622 185619, overlap 185623 185625 ATTGTCAATTTTAAA TCACCTCCT ACGG AGGCGGTGA TCGTTGATGTGGGGC TERM 215 185639 - 185623 - T 72 -10.1 -2.79492 | opp_overlap 185622 185619, overlap 185622 185625 TTGTCAATTTTAAAT CACCTCC TAC GGAGGCG GTGATCGTTGATGTG YE0157 186524 - 185847 - | putative chaperone protein TERM 216 186303 - 186284 - G 75 -5.8 -4.57353 | gap 1, opp_overlap 186283 186288 186289 186291, overlap 186289 TGGCACCAGATAAAA TCAAACGCA AGC TGCGTT-GA GCTTGTGGTTGTAAT TERM 217 186299 - 186289 - G 71 -6.8 -4.30161 | opp_overlap 186283 186288 186289 186291, overlap 186284 CCAGATAAAATCAAA CGCA AGC TGCG TTGAGCTTGTGGTTG YE0158 187938 - 186571 - | hypothetical protein YE0159 190175 - 187956 - | putative outer membrane usher protein TERM 218 189714 - 189739 + g 75 -6.1 -4.56597 | ACCACGCATTGATTC TGGCCACATAC GTTG GTCTGTCGCCA TTTTTACACCGCGAA YE0160 191330 - 190653 - | putative fimbrial chaperone YE0161 192047 - 191517 - | putative fimbrial protein ppiC 192945 - 192664 - | peptidyl-prolyl cis-trans isomerase C TERM 219 193050 - 193090 + H 81 -4.2 -5.31275 | gap 2, overlap 193054 TTAGTCGTGATGGGG CCACGCTGGTCAGCTTTT ACAAATC AAAAGATG-CCAGC-TGG TTTTTTGTCATCAGC TERM 220 193608 - 193620 + G 72 -10.5 -3.07816 | TCTTCTCGATCCTGC CGCCG CCG CGGCG TTGGCTCGATCCGAA TERM 221 194138 - 194162 + G 74 -6.4 -4.36914 | opp_overlap 194136, overlap 194136 ATGAAGCTGAAAGGG TGGTCGGTGA GCTTA TCGCCCACCA TTTTGTGAAAAAAAC TERM 222 194266 - 194286 + G 85 -7.5 -4.85599 | AACCGTATTCCTTAT CGTATCTCC GGC GGGGATTCG TTTTTCTCACGTCCG TERM 223 195141 - 195124 - g 100 -11.3 -4.66609 | opp_overlap 195122 GAGCGGATGCAAAAA GGCCAGA GTCA TCTGGCC AATATTCGAGCGCAA rep 193159 - 195183 + | ATP-dependent DNA helicase Rep pehX 197065 - 195239 - | exo-poly-alpha-D-galacturonosidase precursor TERM 224 195636 - 195660 + g 81 -12.1 -3.01712 | opp_overlap 195633 AAAGTGACATTACGC GCGCCACCACC GAT GGTGCTGGTGC TCTTAGCACGCAGAC TERM 225 195970 - 195980 + g 71 -6.8 -4.15106 | TCAATCCGTTGGCAA CCAC ATT GTGG TTTTCCAGATTCATA TERM 226 197323 - 197297 - R 74 -7.9 -3.9749 | gap 1, overlap 197298 AGGTAGAAGAGTAAA GCGTCCGCGCCA CGGA CGGCGCGG-CTC GAGCCCCCAGGGAGG TERM 227 197314 - 197298 - R 73 -10.1 -2.97771 | overlap 197297 GGTAGAAGAGTAAAG CGTCCGC GCC ACGGACG GCGCGGCTCGAGCCC gppA 198903 - 197407 - | guanosine pentaphosphate phosphohydrolase mmrA 199983 - 198907 - | putative DEAD-box helicase TERM 228 199445 - 199463 + g 85 -3 -5.59655 | opp_overlap 199447, overlap 199446 199447 CACTCTTCTTCAATC AACGTCTG AAG CAGACGCA TTTTTTCTTCATTTG TERM 229 199461 - 199447 - G 73 -10 -3.33696 | opp_overlap 199447 199446 199445 CTCTTCTTCAATCAA CGTCTG AAG CAGACG CATTTTTTCTTCATT TERM 230 199504 - 199514 + g 76 -2.4 -5.25803 | CAGCTCTTCCTGAAT GCGG TGG CCGG TTTTTTGTAACGGTT fipA 200312 - 200638 + | thioredoxin 1 TERM 231 200752 - 200773 + F 95 -13.1 -3.15544 | TGCTAGCCCGCAGGG TGAGCCTCA AGGA TGAGGCTCA TTAATCCCGGTGAGC TERM 232 202080 - 202069 - g 76 -2.2 -5.31275 | GTTGAGCATAAAAAA GACG TTAT CATC TTACTGGATTCCATT rho 201295 - 202554 + | transcription termination factor Rho TERM 233 202600 - 202571 - f 76 -10.8 -2.63348 | opp_overlap 202576, overlap 202576 TTTAGCAAGATCAAT CAAAACGCCACG CTCAGT CGTGGCGTTTTT TGCTTTTGGAATATA TERM 234 202595 - 202576 - f 100 -10.7 -4.49337 | opp_overlap 202576, overlap 202571 CAAGATCAATCAAAA CGCCACG CTCAGT CGTGGCG TTTTTTGCTTTTGGA TERM 235 202576 - 202595 + F 100 -10.7 -5.46698 | opp_overlap 202576 202571 CAAGATCAATCAAAA CGCCACG CTCAGT CGTGGCG TTTTTTGCTTTTGGA TERM 236 202993 - 203010 + G 71 -4.1 -4.74598 | overlap 202988 CATTAGTGGGCGGAA TATCCGT GTTT GCGGGTA TTTGTTTTACCTTTC b3784 202836 - 203933 + | putative undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase TERM 237 204458 - 204444 - g 100 -5.7 -5.67063 | GTGATGATAAAAAAA TGCTG AATGA CAGCA TCAAATTGACGGCAG b3785 203969 - 205030 + | lipopolysaccharide biosynthesis protein WzzE TERM 238 205063 - 205045 - f 73 -8.8 -3.55866 | GTAGACTTAAAGTAA TGGGCGCA TTG TGCGTCCA ACTTGCAGGCATTGT nfrC 205110 - 206240 + | UDP-N-acetylglucosamine 2-epimerase wecC 206237 - 207499 + | UDP-N-acetyl-D-mannosamine dehydrogenase TERM 239 207515 - 207527 + G 90 -10.5 -4.4009 | GACGTATTCTGGTCA CCGGC GGA GCCGG TTTTATCGGCTCCGC rffG 207496 - 208563 + | dTDP-D-glucose-4,6-dehydratase TERM 240 208738 - 208761 + F 71 -6.8 -4.10007 | overlap 208760 TAATCATTGGGATGG CATCATTCAA TATT TTGCATGATG TTTTCAAGACATTGT rffH 208794 - 209675 + | glucose-1-phosphate thymidylyltransferase TERM 241 209968 - 209947 - g 73 -10.1 -3.22091 | ACTGGAACTTATCAA CAGCGGCTG GCAA CAACCGCCG ATATCCCGCTATTGC b3790 209764 - 210390 + | TDP-fucosamine acetyltransferase b3791 210392 - 211522 + | TDP-4-oxo-6-deoxy-D-glucose transaminase TERM 242 211559 - 211586 + G 90 -12.8 -3.77722 | GATTTGGACTGCTGG CTCTACGCTGAT TAAG ATCGGCGTAGGG TTGTTAGTGGTTAAA b3792 211524 - 212780 + | putative lipopolysaccharide biosynthesis protein TERM 243 213033 - 213045 + G 77 -4.7 -4.85599 | overlap 213034 CCGCGCGCAGGCCTC CCGCG ATA CGCGC TTTTTCTGGCATGGG YE0178 212803 - 213888 + | 4-alpha-L-fucosyltransferase TERM 244 213917 - 213933 + G 73 -5.1 -4.63863 | TGGTGGTCTTTTCAG CGTCTAT TTA ATAGCCG TTATTTTTATCTTGA rffT 213885 - 215261 + | putative entero common antigen polymerase rffM 215354 - 216028 + | putative UDP-N-acetyl-D-mannosaminuronic acid transferase TERM 245 216592 - 216608 + G 75 -7.9 -4.26189 | opp_overlap 216582 GAAATGCTCTATCTG GAGCCAG TTG CAGGCTC TTTTGCCGTTTATGC YE0181 216379 - 217770 + | putative transport protein YifK TERM 246 218436 - 218422 - T 100 -12.8 -4.33248 | opp_overlap 218422 CAATTTCAGAAGAAA CCCCGC AAT GCGGGG TTTTTTTTCGTCTGT TERM 247 218422 - 218436 + T 100 -12.8 -5.92337 | opp_overlap 218422 CAATTTCAGAAGAAA CCCCGC AAT GCGGGG TTTTTTTTCGTCTGT TERM 248 219108 - 219129 + T 100 -11.6 -5.81412 | CCTGAAAATTTCAGA CGCTTGCC CTTATC GGCAAGCG TTTTTTTTGCATACC TERM 249 219224 - 219209 - T 100 -10.4 -4.87803 | opp_overlap 219209 CAGGGGTAAAGAAAA GGCTCC CAAA GGAGCC TTTAGATGACGAATA TERM 250 219209 - 219224 + T 82 -10.4 -3.6502 | opp_overlap 219209 CAGGGGTAAAGAAAA GGCTCC CAAA GGAGCC TTTAGATGACGAATA hemY 220560 - 219361 - | putative protoheme IX biogenesis protein TERM 251 219494 - 219522 + g 79 -9.5 -3.92522 | CCGTCTGGGCGCTGT GCAAGTGCGGCTT TAA AGGCCTCACTGGC TTTCTCCCATTCGCC hemX 221687 - 220563 - | putative uroporphyrinogen III C-methyltransferase TERM 252 220956 - 220924 - G 80 -8.5 -4.45083 | opp_overlap 220924 CGGATAGTGATAAAA TCTGACATAAAGCTA TGC CAGCTTTTGGTCAGA TTCTGACGCCACTCG hemD 222466 - 221720 - | uroporphyrinogen-III synthase hemC 223404 - 222463 - | porphobilinogen deaminase TERM 253 223449 - 223488 + H 81 -5.1 -5.1101 | gap 2 CCATCCTACCATTGA CCGATGAAGGCTGTCAGTG TGGT CGCT-ACGGCCTTAA-CGG TTTTTTGCCTGATAC TERM 254 226344 - 226317 - g 73 -8.4 -3.87373 | opp_overlap 226330 226334 226337, overlap 226321 CATATTGCGGATAAA GAAACCTCCGCG CCGG CGCAGCAGTTTC AGCTACATTGATTTC cyaA 223809 - 226355 + | adenylate cyclase cyaY 226846 - 226526 - | frataxin-like protein YE0191 226960 - 227163 + | putative lipoprotein dapF 227252 - 228076 + | diaminopimelate epimerase YE0193 228170 - 228874 + | hypothetical protein xerC 228871 - 229782 + | site-specific tyrosine recombinase XerC YE0195 229782 - 230498 + | flavin mononucleotide phosphatase TERM 255 230563 - 230546 - f 71 -6.9 -4.18094 | opp_overlap 230538 230546 GAAATGATGTTAAAA TCGCCGG ATAA CTGGCGA TTTGGCTATTTTCCC TERM 256 230546 - 230563 + F 78 -9.1 -3.85184 | opp_overlap 230546, overlap 230538 GAAATGATGTTAAAA TCGCCGG ATAA CTGGCGA TTTGGCTATTTTCCC TERM 257 230666 - 230638 - g 85 -7.3 -4.86621 | opp_overlap 230649 230650, overlap 230642 230643 AGCCTGAATGAAAAA CAACGTGAAGCCG TGG CCGCGCCACGCTG CAACCTGTTGGTACT TERM 258 231064 - 231049 - g 75 -3.2 -5.10029 | overlap 231055 ATCAACGGCAAAAAA GACGAA GGTC TACGTC CGCAGCATATTGAGA TERM 259 231717 - 231707 - g 73 -8.2 -3.85817 | AGGCCTTGTTACAAA CGGC GAT GCCG TACCGTATTTATGGT uvrD 230599 - 232761 + | DNA-dependent helicase II TERM 260 233195 - 233221 + T 70 -9.4 -2.81564 | overlap 233194 233197 CCCGAATCACTTATT CATGCGGCTC TCATCCT GAGCCGCCTG CTTTGCATCGGTTTC YE0197 233758 - 233186 - | TetR family regulatory protein YE0198 234065 - 235297 + | hypothetical protein TERM 261 235299 - 235284 - f 70 -2.5 -4.97461 | AAGAAATAGCAAAAA CCCCA TCCCAT TAGGG GCATAAAAATATCTG YE0199 235324 - 236154 + | hypothetical protein TERM 262 236237 - 236258 + F 100 -8.7 -5.54079 | opp_overlap 236237 236232 TCAGGATACACAAAA CCGAAGTCG AAGC TGGCTTCGG TTTTTTACTTTTTAC TERM 263 236258 - 236237 - f 75 -5.8 -4.62984 | opp_overlap 236237, overlap 236232 TCAGGATACACAAAA CCGAAGTC GAAGCT GGCTTCGG TTTTTTACTTTTTAC corA 236657 - 237607 + | magnesium/nickel/cobalt transporter CorA TERM 264 237752 - 237775 + T 90 -7.4 -5.12707 | opp_overlap 237752 TGGGTGAATAAAAAA GCCCGGTAAC TCAT GTTATCGAGC TTTTTTAGCATTTGA TERM 265 237775 - 237752 - T 95 -7.4 -5.4505 | opp_overlap 237752 TGGGTGAATAAAAAA GCCCGGTAAC TCAT GTTATCGAGC TTTTTTAGCATTTGA rarD 238685 - 237795 - | hypothetical protein TERM 266 238435 - 238425 - G 71 -6.8 -4.26693 | overlap 238419 CCAAATAAATAATAA CCAG TTA CTGG CAATTAACACCGCAG YE0202 239235 - 238765 - | hypothetical protein pldA 239416 - 240294 + | phospholipase A TERM 267 240352 - 240315 - f 74 -7 -4.36914 | gap 2, opp_overlap 240318, overlap 240316 240325 240327 TCCGGCGTTAGAAAA GTTTCAGACACAGGCCGG TTAA CCGGCCTGTG-CAGAT-C TCATAGTTGGGGAAT TERM 268 240318 - 240350 + F 95 -14.2 -2.86164 | gap 1, opp_overlap 240315 240316 240325 240327 GGCGTTAGAAAAGTT TCAGACACAGGCCGG TTAA CCGGCCTGTG-CAGA TCTCATAGTTGGGGA TERM 269 240344 - 240325 - f 100 -15 -2.91429 | opp_overlap 240318, overlap 240315 240316 240327 GAAAAGTTTCAGACA CAGGCCGG TTAA CCGGCCTG TGCAGATCTCATAGT TERM 270 240342 - 240327 - f 86 -11.8 -3.00215 | opp_overlap 240318, overlap 240325 240315 240316 AAAGTTTCAGACACA GGCCGG TTAA CCGGCC TGTGCAGATCTCATA TERM 271 242007 - 241991 - g 74 -9.5 -3.5394 | opp_overlap 241973 241990 AAATTGTTCGCCAAA TTGCGTA AAT TACGCAA ATCTATCGCCGACGA recQ 240371 - 242221 + | ATP-dependent DNA helicase RecQ rhtC 242284 - 242904 + | threonine efflux system rhtB 243574 - 242954 - | homoserine/homoserine lactone efflux protein TERM 272 243822 - 243833 + G 75 -5.8 -4.63218 | opp_overlap 243822 GTTGACCCGCGAAGA GCAG TTTG CTGC TTTTGTTAACGGCCC TERM 273 244378 - 244398 + G 86 -13.3 -2.95774 | opp_overlap 244372, overlap 244393 TATGCAATAGGCACC GGGCAGTGG CGG CCATTGCCC TATGTGGTCAATATG TERM 274 244742 - 244755 + G 82 -5.2 -5.00884 | overlap 244734 244733 GTGCCGAGGCGCTAA GCGC CATATT GCGC TTTTTTGCGCAACAT pldB 243778 - 244833 + | lysophospholipase L2 YE0208 244845 - 245654 + | putative sugar phosphatase TERM 275 245788 - 245816 + T 100 -17.5 -5.01042 | opp_overlap 245782 TTGTAATCAGTCTGA GGGGGGACGATAA CCC TTACCGTCCCCCC TTTTTGATTTCAGTT glpQ 246864 - 245866 - | glycerophosphodiester phosphodiesterase TERM 276 247048 - 247011 - R 91 -8.6 -4.7373 | gap 1, overlap 247039 TCAGGGTATGAAAAA GGCTGTGTCGCTAT-TA ATCCA TAGATAACGGCACAGCC TGTAAGCTACTTAAT TERM 277 247067 - 247090 + r 79 -3.3 -5.29782 | gap 1 AAGCTACTTAATCAT TAGGATACAA ATTTA TTG-ATCCTA TTTTTTATCCATCTC glpT 248452 - 247088 - | sn-glycerol-3-phosphate transporter TERM 278 247299 - 247315 + g 100 -9.3 -5.1101 | AAACCGGTGAAGCCT GCTGCGG TAC CCGCTGC TTTTTTCGGTGCTAA TERM 279 248938 - 248950 + H 76 -10.5 -2.97188 | opp_overlap 248935 248938 ATAGACTCATAATTA GCCGC CAG GCGGC TGTCTGATAATGTGG TERM 280 248950 - 248938 - H 75 -10.5 -2.8598 | opp_overlap 248938, overlap 248935 ATAGACTCATAATTA GCCGC CAG GCGGC TGTCTGATAATGTGG glpA 248974 - 250629 + | sn-glycerol-3-phosphate dehydrogenase subunit A TERM 281 251558 - 251571 + G 73 -2.3 -5.1101 | GCGGCTCAGATGGTG CTGGC GAGT GGCAG TTTTTTCAGTAATGG glpB 250619 - 251893 + | anaerobic glycerol-3-phosphate dehydrogenase subunit B glpC 251932 - 253155 + | sn-glycerol-3-phosphate dehydrogenase subunit C TERM 282 253272 - 253308 + T 100 -11.8 -3.84017 | gap 1, opp_overlap 253295 253296, overlap 253273 TGTGGATTTTCTTTT GTCCTTGAAGG-GGTTA CCAA TAACCTCCTTCAAGGAA TTCTATTTCAGCTTC TERM 283 253273 - 253307 + T 100 -15.3 -2.89687 | gap 1, opp_overlap 253295 253296, overlap 253272 GTGGATTTTCTTTTG TCCTTGAAGG-GGTTA CCAA TAACCTCCTTCAAGGA ATTCTATTTCAGCTT dcrB 253754 - 253311 - | hypothetical protein yhhQ 254576 - 253896 - | hypothetical protein TERM 284 254969 - 254983 + G 73 -5.6 -4.6526 | opp_overlap 254969 254968 CGATCCCGCCACAAC CCGTGA CAT TCCCGG TTTTTGCCGCTTTAT YE0217 254823 - 255077 + | cell developmental protein SirA TERM 285 255093 - 255060 - T 77 -4.6 -5.0133 | gap 1, opp_overlap 255061 255069, overlap 255061 TATCTGGTCAAAAAA GGGGCAAAAGCGG AGTAGAAAA CCGCTTT-GCCCT TGTCGTCAAATATCC TERM 286 255092 - 255061 - T 70 -8.1 -3.60316 | gap 1, opp_overlap 255061 255069, overlap 255060 ATCTGGTCAAAAAAG GGGCAAAAGCGG AGTAGAAAA CCGCTTT-GCCC TTGTCGTCAAATATC zntA 257429 - 255099 - | zinc/cadmium/mercury/lead-transporting ATPase TERM 287 256709 - 256691 - G 74 -9.6 -3.57406 | overlap 256689 CGCCGACCATAAACA GCAGCAAT ACC ATTGCCGC TTCAGCGGTTGCGCC TERM 288 256752 - 256731 - G 75 -7.9 -4.15044 | GGTTGCGCCAATAAA CATCGCGCC AATA GCCGCGACG CTCATCAAGGTTTCA TERM 289 257331 - 257347 + g 73 -2.1 -5.05153 | overlap 257320 257333 TATATTGGCAGCGGG CTGGCTG CTG CAACCTG TTTGTTTTTTCGCAT yhhN 258339 - 257713 - | hypothetical protein TERM 290 258885 - 258875 - g 77 -8.2 -4.30014 | CGCAGTAACTGAAAA GGGC AGC GCCC GAATCTCCGAACTGG YE0221 258627 - 258947 + | hypothetical protein YE0222 258986 - 259369 + | hypothetical protein yhhL 259682 - 259410 - | hypothetical protein YE0224 260226 - 259672 - | 16S rRNA m(2)G966-methyltransferase TERM 291 260605 - 260583 - g 74 -6.4 -4.31329 | CCAAAAATGGCAAAA GAAAAAAAAC GTG GATTTTTTTC CTGGCTGGGCTTAGG ftsY 260574 - 262097 + | cell division protein ftsE 262103 - 262771 + | cell division protein FtsE ftsX 262860 - 263720 + | cell division protein FtsX fam 264131 - 264988 + | RNA polymerase factor sigma-32 TERM 292 265015 - 265047 + T 100 -8.6 -5.32699 | gap 1, opp_overlap 265022, overlap 265022 AACGCTGTGTGATCC GAAGAAAGGGCGATA CTCA TATCGCCCTTT-TGC TTTTTTGATGTTTAC TERM 293 265041 - 265022 - T 100 -12.2 -4.1822 | opp_overlap 265015 265022 TGTGATCCGAAGAAA GGGCGATA CTCA TATCGCCC TTTTGCTTTTTTGAT TERM 294 265022 - 265041 + T 100 -12.2 -4.88217 | opp_overlap 265022, overlap 265015 TGTGATCCGAAGAAA GGGCGATA CTCA TATCGCCC TTTTGCTTTTTTGAT yhhK 265476 - 265084 - | putative acetyltransferase TERM 295 266467 - 266479 + G 70 -7.7 -3.93256 | opp_overlap 266467 266466 TTTGAAAAAACAAGG CACAG AAC CTGTG TTGTTTGAAGGTGTA livJ 265898 - 267013 + | branched-chain amino acid-binding protein TERM 296 267076 - 267096 + F 100 -9.7 -4.90266 | overlap 267093 CTTTTACCAACTGCA TCCCCCC ACGTTCC GGGGGGA TTTTTCCTTACTGCA TERM 297 267766 - 267749 - g 75 -5.5 -4.74706 | opp_overlap 267749 CTGAAGATTTAAAAA TGGCCAG TTTG CTGGGCA TTAATACTGACCGTG livH 267172 - 268098 + | branched-chain amino acid transporter permease subunit LivH TERM 298 268638 - 268650 + G 71 -6.9 -4.2349 | CTGTCGGGCTTCCTG CTGGG TTT CCCGG TTTTACGTCTGCGCG livM 268095 - 269381 + | leucine/isoleucine/valine transporter permease subunit TERM 299 269754 - 269739 - g 71 -7.5 -4.07568 | CCGGTTTGCTGAAAA CGCCG GGCTTT CGGCG GGCAGAGGCTGATGC livG 269378 - 270145 + | leucine/isoleucine/valine transporter ATP-binding subunit TERM 300 270510 - 270478 - g 71 -10.6 -2.79452 | overlap 270477 ACGGTGGAAGAGAAC CTGGCGATGGGC GGATTTTTT GCCGATCGCCAG CAATATCAGCAACGT livF 270190 - 270891 + | leucine/isoleucine/valine transporter ATP-binding subunit TERM 301 270917 - 270946 + T 86 -7.9 -4.59342 | overlap 270921 270924 CTTTCAACTTATTAT TTTCTAAGGCCCA ACTC TGGGCCTTATTAA TTTCTTTATGCTAAA TERM 302 270921 - 270942 + T 100 -13.1 -3.79164 | overlap 270917 270924 CAACTTATTATTTTC TAAGGCCCA ACTC TGGGCCTTA TTAATTTCTTTATGC TERM 303 270924 - 270939 + T 89 -10.4 -3.99091 | overlap 270921 270917 CTTATTATTTTCTAA GGCCCA ACTC TGGGCC TTATTAATTTCTTTA YE0235 272022 - 270952 - | hypothetical protein TERM 304 271693 - 271683 - G 71 -2.6 -4.87665 | opp_overlap 271683 CGCCATCGAGAAAAA TATT ACT AATA TTCCTAATGTTAATA YE0236 272602 - 272084 - | hypothetical protein TERM 305 272325 - 272344 + g 75 -3.4 -5.00884 | opp_overlap 272317, overlap 272327 TAGACAACCCCTGAG CGGCGGGT GAGT ACCAGCGG TTTTTTCACCGAAAT TERM 306 272462 - 272474 + g 71 -6.9 -4.24606 | overlap 272453 GATGCTGTGGTACCA GCCGC CTT GTGGC TTTTCGATCTCGATT YE0237 273240 - 272611 - | hypothetical protein YE0238 273919 - 273233 - | hypothetical protein YE0239 276249 - 273937 - | hypothetical protein TERM 307 276207 - 276227 + g 77 -8.3 -4.28361 | opp_overlap 276207 GAGCAACTAAAACAG CCTTGTCAA TTA TTGACGGGG TTTTCATAGGATTCC TERM 308 276390 - 276354 - R 85 -9.6 -4.14739 | gap 1, opp_overlap 276354 276357, overlap 276356 276357 276359 GTATTTAGTTGAAAA TAGCATGCAGCCAAGAG TTCA CCCCTGACTGCATG-TA TTATCTATAAGGAAA TERM 309 276389 - 276356 - R 82 -10.3 -3.67188 | opp_overlap 276354 276357, overlap 276354 276357 276359 ATTTAGTTGAAAATA GCATGCAGCCAAGAG TTCA CCCCTGACTGCATGT ATTATCTATAAGGAA TERM 310 276388 - 276357 - R 95 -13.8 -2.79831 | opp_overlap 276354 276357, overlap 276356 276354 276359 TTTAGTTGAAAATAG CATGCAGCCAAGAG TTCA CCCCTGACTGCATG TATTATCTATAAGGA TERM 311 276386 - 276359 - R 76 -10.6 -2.94337 | opp_overlap 276357 276354, overlap 276357 276356 276354 TAGTTGAAAATAGCA TGCAGCCAAGAG TTCA CCCCTGACTGCA TGTATTATCTATAAG YE0240 276906 - 276430 - | hypothetical protein TERM 312 276558 - 276571 + g 70 -2.3 -4.8384 | opp_overlap 276558, overlap 276559 TCAGGTCAAAAAATT CGGCA GCAC TGCCA TTTTTCAATTCTTTA TERM 313 276647 - 276663 + g 74 -2.9 -5.13722 | overlap 276636 276650 TTCAGCATGGCGAAT GCTTCTC TCA GAGAGAC TTTTATTTTAGTCCC TERM 314 276967 - 276944 - H 75 -10.4 -2.8547 | opp_overlap 276944 276943 ATGTGTTATATGAGA TCCCTATCCA TAAA TGGATAAGGA GTTAATAATACGAGT TERM 315 277268 - 277253 - H 74 -6.2 -4.56702 | opp_overlap 277259 TTTTAAGGAAATAAA TAGTCA TTAT TGACTA ATAAGTGTTATTTAA TERM 316 278215 - 278204 - g 75 -5.8 -4.5032 | opp_overlap 278202 278204 GATATGAACAAGAAA GGTG ATTT CACC TATTTTGGTCGTAAA ugpB 277469 - 278788 + | glycerol-3-phosphate transporter periplasmic binding protein TERM 317 278795 - 278835 + F 74 -9.9 -3.13403 | opp_overlap 278782 278778 278829, overlap 278792 AACAAATAAGGTTAT TTGCCAGTTTGGGTG AGCAGCTTTAG CACTCAAACTGGCGA TATTCATCAGGCCAA TERM 318 279251 - 279269 + G 77 -10.2 -3.48994 | overlap 279243 279253 ACCTTATGCCGTAGC CCCTGCCG TGG CGGCAGTG TTGTGGATCTTTTTG TERM 319 279253 - 279267 + G 82 -11.4 -3.29854 | overlap 279251 279243 CTTATGCCGTAGCCC CTGCCG TGG CGGCAG TGTTGTGGATCTTTT TERM 320 279638 - 279612 - g 81 -12.2 -3.03243 | overlap 279602 ATTGATGCCGCAACA GGCGGTGGCCCG ATG CAGGCGACCACC ACCCTGATTTATAAA ugpA 278898 - 279785 + | glycerol-3-phosphate transporter permease TERM 321 279942 - 279962 + G 71 -8.3 -3.62572 | opp_overlap 279952 279957 TTCCTGGCCCGCATT TATGGCAGA ACA TCAGCCATA TTTGGCATGCTGGTG TERM 322 280329 - 280339 + G 88 -8.2 -4.8667 | GCATTGATGGGGCGG GCGC TAT GCGC TTTTTCTGGGATATC TERM 323 280559 - 280574 + G 71 -10.4 -2.86271 | ATTTTGACTTTAATT CCACCG GTCG CGGTGG TCCTTCTGATGCAGC ugpE 279782 - 280627 + | glycerol-3-phosphate transporter membrane protein ugpC 280634 - 281722 + | glycerol-3-phosphate transporter ATP-binding subunit ugpQ 281719 - 282459 + | cytoplasmic glycerophosphodiester phosphodiesterase TERM 324 282451 - 282472 + F 72 -9.4 -3.21199 | GATTTGATATATCCT CGCCCTTG AAGCTA CAGGGGCG TTAGCTTGCTGCCTA TERM 325 282905 - 282918 + G 73 -2.3 -5.0538 | overlap 282906 282907 ATCCGGCTCGGTATT TGCCC TCGG GGGGA TTTTTTCCAATAACG YE0246 282591 - 283550 + | hypothetical protein TERM 326 284034 - 284057 + GT 83 -8.8 -4.23213 | gap 1 ACGCCGTCAGCGGCT GCGGTG-GGGC TAT GCCCTCAGCGC TTTGTTGGCTGTGGC TERM 327 284508 - 284473 - gT 80 -4.7 -5.06816 | overlap 284475 ATTTGGCAAGAAAAA CCCCATTGGCCCA GCTTTATCAT TGGGGCAATGGTG ATAATGGCCTCGCTA metR 285445 - 284492 - | LysR family transcriptional regulator yigM 283705 - 284604 + | hypothetical protein TERM 328 284905 - 284917 + gF 83 -9.1 -4.21974 | GTGCCAAATCTTCCG GCTCG ATG CGAGC TTTATTGGCTAATGG TERM 329 287691 - 287675 - g 70 -9.5 -3.09933 | GTGGAATGGATTGAA GCTTTAC TGC GTAAAGC GGCCCAGCGTATCCC metE 285551 - 287827 + | 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase TERM 330 287861 - 287879 + T 100 -11.7 -5.30686 | GTGTTGTGAAACTTT GGGCGCA TATTT TGCGCCC TTTTTTATGGCTGTT YE0250 288603 - 287893 - | putative carboxymethylenebutenolidase TERM 331 288147 - 288132 - G 71 -10.4 -2.88544 | CTTTACCGCCATACA GCCCCA GCAC TGGGGC GCAGAGATCGACGGC TERM 332 289048 - 289063 + H 80 -6.2 -4.90217 | opp_overlap 289048 289062, overlap 289062 TAGATAGTCTTAATA TGTGAT TTAA ATCACA TTTTTAATGTATTTG TERM 333 289255 - 289273 + H 95 -13.2 -3.16039 | overlap 289241 289240 TGCTAGCCCGTAGGG TGAGCCTC TTT GAGGCTCA TTAATCCCGATGATT udp 289388 - 290149 + | uridine phosphorylase TERM 334 290303 - 290329 + F 74 -7.9 -3.9749 | gap 1, overlap 290302 CCTCCCTGGGGGCTC GAG-CCGCGCCG TCCC TGGCGCGGACGC TTTACTCTTCTACCT TERM 335 290390 - 290415 + F 100 -15.5 -5.44721 | overlap 290388 GTTTGTCAGCAGTCT GAACGGGTCAG TTTA CTGGCCCGTTC TTTTTTTCGGCTGAT TERM 336 290815 - 290794 - g 71 -4.5 -4.62471 | gap 1, overlap 290795 290798 GCTAATCTGGAAAAA CTGACTAACG AGA CGTTAG-CAA CATTTGATGCCAGAG YE0252 290482 - 291279 + | hypothetical protein TERM 337 291503 - 291519 + F 86 -7.9 -4.59853 | overlap 291505 GTTTGTCAGCAGTCT GCGCCAC TAA GTGGCTC TTTTTAACCGCTTAA TERM 338 291505 - 291517 + F 80 -9.1 -3.91164 | overlap 291503 TTGTCAGCAGTCTGC GCCAC TAA GTGGC TCTTTTTAACCGCTT TERM 339 291679 - 291698 + G 93 -6.4 -5.5112 | overlap 291681 GTGTCCTTGTGATCT GCTACCGT TTAT ACGGTATC TTTTTTGTTCGTAAG TERM 340 291681 - 291696 + G 78 -7.6 -4.39002 | overlap 291679 GTCCTTGTGATCTGC TACCGT TTAT ACGGTA TCTTTTTTGTTCGTA YE0253 291621 - 293438 + | putative carbon starvation protein TERM 341 293467 - 293494 + F 100 -12.1 -5.4833 | opp_overlap 293471 TAGCTTTAGTCCTGA TAAACGGTCGG AATCTC CCGGCCGTTTA TTTTTTGTTAAGTGA TERM 342 293762 - 293781 + G 85 -4.8 -5.41143 | TTCTGGCCGATTTGG GCCGCGGC TGTA GCAGGGGC TTTTTTTGGCGACTG YE0254 293567 - 294097 + | hypothetical protein TERM 343 294354 - 294368 + F 72 -7.1 -4.03234 | TGGTGGGCTTATAGG CTGGC TGATT GCCAG TTTGTCTCAGCAGCG TERM 344 295018 - 295004 - g 83 -7.1 -4.78839 | AAGGGGATAATAAAA CCCAG GGAAA CTGGG GTGAAGTCGTTTTAG rumC 294370 - 295824 + | putative DNA recombination protein ubiE 295958 - 296713 + | ubiquinone/menaquinone biosynthesis methyltransferase TERM 345 297121 - 297146 + G 76 -11.1 -3.15809 | overlap 297120 297118 TTGATCTTGCTGAAT GGGAACCAGCT GAAT GGCTGGCTCCC TATATTGGTGATATT YE0257 296757 - 297380 + | hypothetical protein TERM 346 298746 - 298733 - g 77 -3.1 -5.30616 | gap 1 GCATTGAAAGAAAAA GCACCA TTT TGG-GC TGAAAAATTTCCTGA ubiB 297377 - 299008 + | putative ubiquinone biosynthesis protein UbiB b3836 299209 - 299475 + | Sec-independent protein translocase protein TatA TERM 347 299929 - 299915 - g 74 -6.4 -4.38712 | opp_overlap 299928 CTGACGTTGATAAAA CTGTCA CCC CGACAG CGGTTGAAACCGCCT mtta2 299479 - 300135 + | Sec-independent protein translocase protein TatB TERM 348 300211 - 300225 + G 93 -5 -5.63374 | overlap 300212 TATTGAATTGCATCA TCACTA TTT TAGTGG TTTTTTTCGTATTGG mttB 300138 - 300917 + | TatABCE protein translocation system subunit TERM 349 300938 - 300954 + F 100 -15.1 -3.95435 | overlap 300933 TACTTTGATATTTTA GCCGCCC TCT GGGCGGC TTCTGTTTTGGGACA mttC 300973 - 301755 + | DNase TatD TERM 350 301730 - 301750 + F 78 -8.9 -3.75153 | opp_overlap 301729 301730, overlap 301734 AAACTGATGAAAACG CCCGCCGGA TTT TCCGGTTGG TTTGAGTTAGGAGAA TERM 351 301734 - 301746 + F 73 -9.1 -3.57106 | opp_overlap 301730 301729, overlap 301730 TGATGAAAACGCCCG CCGGA TTT TCCGG TTGGTTTGAGTTAGG hemB 301770 - 302792 + | delta-aminolevulinic acid dehydratase TERM 352 302828 - 302867 + T 93 -13.7 -2.56839 | opp_overlap 302830, overlap 302823 TTGGTTATCAATAAT AAGTGCCAAGGTAGGCA CTGAAA TACCTACCTTGGCACTG TGAGTTAAGTATCTT TERM 353 302865 - 302830 - T 100 -19.2 -3.99374 | opp_overlap 302828 302823 GGTTATCAATAATAA GTGCCAAGGTAGGCAC TGAA ATACCTACCTTGGCAC TGTGAGTTAAGTATC rfaH 303369 - 302881 - | transcriptional activator RfaH TERM 354 303535 - 303547 + H 87 -6.3 -5.09426 | opp_overlap 303535 AATGTTAATGCCAAA TAGCA GCA TGCTA TTTTTTCGAGTTGGC YE0265 303638 - 305134 + | 3-octaprenyl-4-hydroxybenzoate decarboxylase fre 305189 - 305890 + | FMN reductase TERM 355 305927 - 305911 - T 100 -7.9 -5.37043 | overlap 305912 ACGGCAGATAAAAAA GCCCGCC CCT GACAGGC GGGAAAACGGCAACT TERM 356 305930 - 305912 - T 81 -9.5 -3.81141 | overlap 305911 CGGCAGATAAAAAAG CCCGCCC CTGAC AGGCGGG AAAACGGCAACTAAA TERM 357 305953 - 305981 + T 74 -4.6 -4.78149 | gap 1, overlap 305954 305955 305973 CAACTAAACTCTGGT TAT-CAGGGCCTG TATT CAGGCCCTAAATG TTTTTGGGTTATACG TERM 358 305954 - 305979 + T 72 -7.5 -4.00465 | overlap 305953 305955 305973 AACTAAACTCTGGTT ATCAGGGCCTG TATT CAGGCCCTAAA TGTTTTTGGGTTATA TERM 359 305955 - 305978 + T 79 -11 -2.99195 | overlap 305954 305953 305973 ACTAAACTCTGGTTA TCAGGGCCTG TATT CAGGCCCTAA ATGTTTTTGGGTTAT fadA 307153 - 305990 - | 3-ketoacyl-CoA thiolase fadB 309354 - 307165 - | multifunctional fatty acid oxidation complex subunit alpha TERM 360 307206 - 307194 - G 71 -9.1 -3.52522 | TGATAGAAACATCAA GCAGC GCT GCTGC CACAGGATAATAGCT TERM 361 308016 - 308006 - G 75 -3.2 -5.09225 | ACTGGATTGAAAAAA TGCA TGC CGCA GAAGTTTTCTGGACG TERM 362 309300 - 309310 + g 76 -8.2 -4.08216 | opp_overlap 309299 CATCAAACACCAACT CGGC AAT GCCG TTTTCCAGCCAGTGA TERM 363 310032 - 310044 + G 74 -9.1 -3.64703 | opp_overlap 310028, overlap 310029 ATGCTCAGCAACGCG CCCAG GCG CTGGG TTTCAGTGCAGAAAA pepQ 309626 - 310975 + | proline dipeptidase TERM 364 311119 - 311138 + F 100 -11.4 -4.63218 | opp_overlap 311117 311110 311119 CAACAACACCCAACA GCCCGGCA TCAT TGCTGGGC TTTTGTTGCCGGGAC TERM 365 311138 - 311119 - f 72 -9.2 -3.18032 | opp_overlap 311119, overlap 311117 311110 CAACAACACCCAACA GCCCGGCA TCAT TGCTGGGC TTTTGTTGCCGGGAC TERM 366 312059 - 312070 + G 72 -5.8 -4.35581 | TGGGGATCATCGTCT TGGC AGTG GCCA TTTTGCCTATTTTGG trkH 311626 - 313077 + | potassium transporter hemG 313099 - 313632 + | protoporphyrinogen oxidase TERM 367 315740 - 315751 + F 78 -5.8 -4.7497 | ATTGTGTTGTAAGGC CTCG GCAT CGAG TTTTTACTGCATCAG TERM 368 315828 - 315808 - f 100 -11.3 -4.9725 | opp_overlap 315806 ACCTTTACACAAAAA TACTGAATC CAT GATTCAGTA GAAATTTTTGTGTCC TERM 369 315968 - 316005 + F 83 -10.9 -3.45839 | opp_overlap 315967 315968, overlap 315950 TTATGAACTCAAAAG TATCTTAAAGATGACTT TAAC AAGTCGTGTTTAAGATA TTGCTCTTTAACAAT TERM 370 317673 - 317655 - f 82 -10.3 -3.57798 | overlap 317668 CATAAGTAACGATAA TGCGGGT GAAAA ACCCGCA CGCCGGAAGACCAAG TERM 371 318180 - 318169 - f 74 -4.4 -5.06816 | ACTGTTTAATAAAAA CACA GCAC TGTG CAAACACGAAAGTGG TERM 372 319292 - 319302 + F 82 -6.8 -4.78848 | opp_overlap 319292 GGCTTAACCTTACAA CACC AAA GGTG TTTTGTATTTGAGAG TERM 373 319531 - 319565 + F 77 -10.7 -2.87931 | opp_overlap 319531, overlap 319538 CAGGCATCAAATCAA GCCGAGACCCCATGC CAAAA GCGTGGGGTTTTTGC TATGTGGGAAATAAA TERM 374 319538 - 319558 + F 100 -10.4 -4.84527 | opp_overlap 319531, overlap 319531 CAAATCAAGCCGAGA CCCCATGC CAAAA GCGTGGGG TTTTTGCTATGTGGG TERM 375 319625 - 319585 - f 100 -3.9 -5.95539 | opp_overlap 319595, overlap 319593 319595 TGGGAAATAAAAAAA CCAAGAAAGAGCCTTCTGC TGA GCAGAGGGCTTTTTTTATG TACTCACTTAAAACA TERM 376 319617 - 319593 - f 87 -8.5 -4.56335 | opp_overlap 319595, overlap 319585 319595 AAAAAAACCAAGAAA GAGCCTTCTGC TGA GCAGAGGGCTT TTTTTATGTACTCAC TERM 377 319595 - 319615 + F 100 -13.3 -5.74122 | opp_overlap 319593 319585 319595 AAAAACCAAGAAAGA GCCTTCTGC TGA GCAGAGGGC TTTTTTTATGTACTC TERM 378 319615 - 319595 - f 88 -11.1 -3.83466 | opp_overlap 319595, overlap 319593 319585 AAAAACCAAGAAAGA GCCTTCTGC TGA GCAGAGGGC TTTTTTTATGTACTC TERM 379 319864 - 319876 + G 75 -7.7 -4.183 | CTTGCTTGGGGAAGG CAGCA ACG TGCTG TTTATTGAGAATTAC murB 319709 - 320746 + | UDP-N-acetylenolpyruvoylglucosamine reductase bioR 320743 - 321702 + | biotin--protein ligase TERM 380 321713 - 321737 + T 78 -5.6 -4.76233 | opp_overlap 321715, overlap 321714 321715 TTTAATTGAGATATT AAGCGGGTAG TTATT CTACCCGCAA TTTATTATTTTCTTA TERM 381 321714 - 321736 + T 73 -9.1 -3.43299 | opp_overlap 321715, overlap 321713 321715 TTAATTGAGATATTA AGCGGGTAG TTATT CTACCCGCA ATTTATTATTTTCTT TERM 382 321735 - 321715 - T 95 -12.6 -3.33708 | opp_overlap 321715 321714 321713 TAATTGAGATATTAA GCGGGTAG TTATT CTACCCGC AATTTATTATTTTCT TERM 383 321715 - 321735 + T 88 -12.6 -2.63539 | opp_overlap 321715, overlap 321714 321713 TAATTGAGATATTAA GCGGGTAG TTATT CTACCCGC AATTTATTATTTTCT coaA 322692 - 321742 - | pantothenate kinase TERM 384 322243 - 322257 + g 83 -4.3 -5.5112 | opp_overlap 322243 ACTGTGCATATCATA GGATT GTGGG AATCC TTTTTTCTTCATCAA TERM 385 322562 - 322586 + g 75 -5.7 -4.57503 | TCTAATGAAAGATCT TCGTTAATCCC TTT GAGTTTAACGA TTTCTTCTTCTGTTA TERM 386 322756 - 322782 + r 86 -8 -4.62069 | opp_overlap 322757, overlap 322757 AACTCCAGATAAGAA ACAAGCTGCATA TTA TAGGCAGCTTGC TTTTTGGCGTAGACA TERM 387 322757 - 322781 + r 86 -11.5 -3.3692 | opp_overlap 322757, overlap 322756 ACTCCAGATAAGAAA CAAGCTGCATA TTA TAGGCAGCTTG CTTTTTGGCGTAGAC TERM 388 322781 - 322757 - R 100 -11.5 -4.39329 | opp_overlap 322756 322757 ACTCCAGATAAGAAA CAAGCTGCATA TTA TAGGCAGCTTG CTTTTTGGCGTAGAC YE0277 323453 - 322902 - | putative acetyltransferase TERM 389 323534 - 323551 + H 71 -4.1 -4.77079 | opp_overlap 323536 AGGAAACAGTGATAT TATGGGC GCTG GGCCATA TTTTCTTGCTATCTC TERM 390 324119 - 324107 - H 76 -7.7 -4.19506 | AGGGGAAGGTGAAAA CCTTC GAC GAAGG TTCGAGCCGAGCGTA tufA 324617 - 325801 + | elongation factor Tu TERM 391 325819 - 325849 + F 83 -12.1 -2.62024 | gap 1, opp_overlap 325826, overlap 325826 TTTGACGCGACATGC GATAAAAGGGCATC ATTT GATGCCCTTTT-TC TACGTTGTCATACTA TERM 392 325826 - 325843 + F 100 -11.3 -4.93318 | opp_overlap 325826, overlap 325819 CGACATGCGATAAAA GGGCATC ATTT GATGCCC TTTTTCTACGTTGTC TERM 393 325843 - 325826 - f 100 -11.3 -4.41548 | opp_overlap 325819 325826 CGACATGCGATAAAA GGGCATC ATTT GATGCCC TTTTTCTACGTTGTC TERM 394 325982 - 326006 + F 79 -7.9 -4.28115 | overlap 325983 326002 GCATCCTTCGGCTTG GTTTGCTTTGC GGT GCGAAGCAAAG TTGTTTGTTCTGAAT TERM 395 325983 - 326005 + F 84 -11.4 -3.15784 | overlap 325982 326002 CATCCTTCGGCTTGG TTTGCTTTGC GGT GCGAAGCAAA GTTGTTTGTTCTGAA secE 326041 - 326424 + | preprotein translocase subunit SecE nusG 326426 - 326971 + | transcription antitermination protein NusG TERM 396 327012 - 327040 + F 100 -12.6 -5.2853 | TTGAGTCTTGTCTTA GGCGTGAAATTA CAATA TAATTTCGCGCC TTTTGTTTTTAGATG rplK 327165 - 327593 + | 50S ribosomal protein L11 rplA 327597 - 328301 + | 50S ribosomal protein L1 TERM 397 328325 - 328363 + F 84 -11.1 -3.724 | overlap 328321 328326 328328 TGCTTTTATCGCTTT ACGTGGGCGTAAGGTTT GTCTA GAATCTTACGCCCATGC TTCTGTTGATGGCTT TERM 398 328326 - 328362 + F 100 -14.6 -2.82717 | overlap 328321 328325 328328 GCTTTTATCGCTTTA CGTGGGCGTAAGGTTT GTCTA GAATCTTACGCCCATG CTTCTGTTGATGGCT TERM 399 328328 - 328360 + F 100 -13.6 -2.95751 | overlap 328321 328326 328325 TTTTATCGCTTTACG TGGGCGTAAGGTTT GTCTA GAATCTTACGCCCA TGCTTCTGTTGATGG TERM 400 328636 - 328654 + F 84 -11.7 -3.14132 | opp_overlap 328649 TGGGTGACGTGAGTT CCGGGGA ATTAA TCCCCGG TTAATCCAGGAGCAA rplJ 328676 - 329179 + | 50S ribosomal protein L10 rplL 329248 - 329616 + | 50S ribosomal protein L7/L12 TERM 401 329655 - 329680 + F 100 -14.1 -4.64766 | GACTTATAGGCTGAT GGCTGGTGACT TTTT AGTCATCAGCC TTTTTGCGCTGTAGG TERM 402 330614 - 330628 + G 73 -8.6 -3.9122 | AATTTCACCACTGCA CAGATC CTT GATCTG TTCTTTGAAAAAGTG TERM 403 333002 - 332986 - g 77 -6.5 -4.56314 | CGAAGACAAGCAAAA CCAGCTG GAA CAGTTGG CAGAGCAGTACGACG TERM 404 333890 - 333880 - g 78 -5.4 -4.91459 | overlap 333868 CAAGATGTACAAAAA CATC GTG GATG GCGATCACCGTATGG rpoB 329960 - 333988 + | DNA-directed RNA polymerase subunit beta TERM 405 335937 - 335922 - g 71 -2.6 -5.00616 | gap 1 CCGCTGGGCAAAAAA GCTATCT CCA AGAT-GC TGAACACTTGTTACC rpoC 334125 - 338345 + | DNA-directed RNA polymerase subunit beta' TERM 406 338391 - 338418 + T 100 -17.2 -5.14163 | CTCCTTTCGGGGTAA TGCCAGTCAGTT AAGC AACTGACTGGCA TTTTTGTTCCTGGCT YE0288 339731 - 338397 - | transposase for insertion sequence element IS1660 TERM 407 339763 - 339739 - R 100 -10.8 -5.61596 | opp_overlap 339739 ATGTGCATAAAAAAA TCCGGAAACG AAGAA CATTTCCGGA TTCTTACACAACCAC TERM 408 339739 - 339763 + r 73 -8.6 -3.61398 | opp_overlap 339739 ATGTGCATAAAAAAA TCCGGAAACG AAGAA CATTTCCGGA TTCTTACACAACCAC TERM 409 339780 - 339797 + r 84 -11.3 -3.09635 | opp_overlap 339778, overlap 339790 TCTTACACAACCACT GGATCGG TCAA CCGATCC TTAACTGATCGGCAT thiH 340999 - 339869 - | thiamine biosynthesis protein ThiH TERM 410 339938 - 339960 + g 76 -11.3 -3.25072 | overlap 339934 CCCTGCCAGCGTTAG TGCCTGAGC CACCT GCTCAGGCG TTCGATTATCATGGG thiG 341780 - 340992 - | thiazole synthase thiS 341997 - 341782 - | sulfur carrier protein ThiS thiF 342776 - 341994 - | thiamine biosynthesis protein thiE 343371 - 342760 - | thiamine-phosphate pyrophosphorylase thiC 345313 - 343427 - | thiamine biosynthesis protein ThiC rsd 346328 - 345825 - | anti-RNA polymerase sigma 70 factor nudC 346420 - 347205 + | NADH pyrophosphatase TERM 411 347464 - 347482 + G 73 -9.6 -3.33492 | opp_overlap 347464, overlap 347477 347478 TGGCCTGTGAAGTGA CGATGCAA CCA TTGCGTCG TTATCCGCTGGATGC TERM 412 347843 - 347853 + G 73 -5.4 -4.61868 | GCTGGATAAATTGGC TGAC AGT GTCA TTTTGTATCTCAATG hemE 347286 - 348353 + | uroporphyrinogen decarboxylase nfi 348377 - 349081 + | endonuclease V YE0299 349127 - 349717 + | hypothetical protein hupA 349906 - 350181 + | transcriptional regulator HU subunit alpha TERM 413 350213 - 350225 + G 77 -4.7 -4.99043 | ATAATAAACGGGGGG GTGGC AAA GCCCC TTTTGTTTATGCAGC yjaH 350186 - 350887 + | hypothetical protein TERM 414 350923 - 350899 - T 90 -10.8 -3.94402 | gap 1, overlap 350902 350914 ATAAGGCCGAAAGAA GTAGGGCACAG CAAA CTGTGCCC-AC AGAATACAGTGGTAG TERM 415 350921 - 350902 - T 100 -13.6 -3.02639 | overlap 350899 350914 AGGCCGAAAGAAGTA GGGCACAG CAAA CTGTGCCC ACAGAATACAGTGGT purD 352277 - 350982 - | phosphoribosylamine--glycine ligase purH 353892 - 352303 - | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase TERM 416 356407 - 356387 - H 100 -11.3 -4.9725 | opp_overlap 356385 ACCTTTACACAAAAA TACTGAATC CAT GATTCAGTA GAAATTTTTGTGTCC TERM 417 356547 - 356584 + H 83 -10.9 -3.45839 | opp_overlap 356547 356546, overlap 356529 TTATGAACTCAAAAG TATCTTAAAGATGACTT TAAC AAGTCGTGTTTAAGATA TTGCTCTTTAACAAT TERM 418 358252 - 358234 - H 82 -10.3 -3.57798 | overlap 358247 CATAAGTAACGATAA TGCGGGT GAAAA ACCCGCA CGCCGGAAGACCAAG TERM 419 358759 - 358748 - H 74 -4.4 -5.06816 | ACTGTTTAATAAAAA CACA GCAC TGTG CAAACACGAAAGTGG TERM 420 359871 - 359881 + H 74 -6.8 -4.35524 | opp_overlap 359871 GGCTTAACCTTACAA CACC AAA GGTG TTTTGAATTTGAGAG TERM 421 360107 - 360141 + H 77 -10.7 -2.87931 | opp_overlap 360107, overlap 360114 CAGGCATCAAATCAA GCCGAGACCCCATGC CAAAA GCGTGGGGTTTTTGC TATGTGGGAAATAAA TERM 422 360114 - 360134 + H 100 -10.4 -4.84527 | opp_overlap 360107, overlap 360107 CAAATCAAGCCGAGA CCCCATGC CAAAA GCGTGGGG TTTTTGCTATGTGGG TERM 423 360244 - 360215 - H 77 -4.9 -4.97824 | opp_overlap 360220, overlap 360220 AAAAGCCAAATAAAA GAGAAGGCTACCC TGTC GGGTGGCCTTTTT TGTTTTATTTGACCC TERM 424 360239 - 360220 - H 85 -9.2 -4.13571 | opp_overlap 360220, overlap 360215 CCAAATAAAAGAGAA GGCTACCC TGTC GGGTGGCC TTTTTTGTTTTATTT TERM 425 360220 - 360239 + H 100 -11.4 -5.95449 | opp_overlap 360220 360215 CCAAATAAAAGAGAA GGCTACCC TGTC GGGTGGCC TTTTTTGTTTTATTT YE0304 360392 - 360706 + | IS1669 hypothetical protein TERM 426 361520 - 361488 - g 100 -16.5 -3.63744 | opp_overlap 361493, overlap 361493 TCTGTCGTTAAAATA CAAAACGCCCGATGA AGT TCATCAGGCGTTTTA AGGCTGAAAAGTGTC TERM 427 361493 - 361515 + G 95 -12 -4.11216 | opp_overlap 361488 361493 CGTTAAAATACAAAA CGCCCGATGA AGT TCATCAGGCG TTTTAAGGCTGAAAA TERM 428 361515 - 361493 - g 100 -14.2 -4.89567 | opp_overlap 361493, overlap 361488 CGTTAAAATACAAAA CGCCCGATGA AGT TCATCAGGCG TTTTAAGGCTGAAAA YE0305 360724 - 361521 + | putative transposase for insertion element IS1669 YE0306 361779 - 362948 + | putative hydrolase TERM 429 362967 - 362954 - T 100 -9.5 -5.75599 | opp_overlap 362954 CAAACCATAAAAAAA GGCCC CGCA GGGCC TTGTGTGAAATCAAC TERM 430 362954 - 362967 + T 76 -9.5 -3.50393 | opp_overlap 362954 CAAACCATAAAAAAA GGCCC CGCA GGGCC TTGTGTGAAATCAAC actP 364642 - 362987 - | acetate permease TERM 431 363874 - 363858 - G 71 -10.1 -2.90219 | overlap 363872 GACAAGGCGGATATA GGGTCGG ATA CCAACCC CCCAGGGCTCATGAT YE0308 364950 - 364639 - | hypothetical protein TERM 432 365000 - 364981 - R 71 -9.2 -3.00418 | opp_overlap 364979 364982, overlap 364980 GAGGCATTAAATAAG GTGCCGCC CGAA GGCGGCAT AATTTACGATGGCGC TERM 433 364982 - 364999 + r 93 -12.7 -2.92613 | opp_overlap 364981 364980, overlap 364979 AGGCATTAAATAAGG TGCCGCC CGAA GGCGGCA TAATTTACGATGGCG acs 366962 - 365004 - | acetyl-CoA synthetase TERM 434 366845 - 366861 + g 73 -8 -4.08394 | TCTTGCCATGCTCAC CCCAGA ATTCA TCTGGG TTTTGCACCGACTGT TERM 435 367163 - 367176 + H 71 -4.5 -4.72272 | opp_overlap 367163 AAAGGAAAGAAAATG TGGGC ATCA GCTCA TTTTTCGTGCGAAAA TERM 436 367557 - 367541 - H 77 -3.8 -5.19275 | opp_overlap 367553 ATTCACAAAAGAAAA CATAAT TATGG ATTATG CAATAATTTAATTTC TERM 437 368292 - 368282 - g 71 -6.8 -4.14257 | CCGAACAAGTACAAA GTGG TAG CCAC AGCCTGGTAAGCACT gltP 367882 - 369195 + | glutamate/aspartate:proton symporter TERM 438 369253 - 369291 + T 100 -18.4 -3.83844 | opp_overlap 369258, overlap 369258 TTTTCTATTATCAGT TAAAACCCCCTGTTGG AGAGAGA CCGACAGGGGGTTTTA TTATTACTTAATGAC TERM 439 369286 - 369258 - T 100 -11.7 -4.21908 | opp_overlap 369258 369253 TATTATCAGTTAAAA CCCCCTGTTGG AGAGAGA CCGACAGGGGG TTTTATTATTACTTA TERM 440 369258 - 369286 + T 100 -13.9 -4.95167 | opp_overlap 369258, overlap 369253 TATTATCAGTTAAAA CCCCCTGTTGG AGAGAGA CCGACAGGGGG TTTTATTATTACTTA YE0311 369970 - 369338 - | putative two-component response regulator TERM 441 369586 - 369573 - G 75 -8.1 -4.15788 | AATTGGCTTAATAAA GCGCT ATTG AGCGC GGGATCAATATAGCG TERM 442 370014 - 370036 + H 71 -9.8 -2.73443 | overlap 370013 TGGCCTCATGGGTGC CCCTTGGCCG AAA TGGCCAATGG ATTATCTCGTCGTGG YE0312 370458 - 371078 + | AraC family transcriptional regulator TERM 443 372036 - 372068 + F 72 -9.9 -2.76696 | overlap 372035 CCTGATGCTGGCTAT CGCTTTTGCTGCCAT GTT GTGGTGGGAAAAGCG CTTCTTCCGCCAACA YE0314 372183 - 372404 + | hypothetical protein TERM 444 372447 - 372431 - T 70 -7.9 -3.61774 | GATAAGACTGTTAAA GGCGGGT TTA ATCCGCC ACAGACTGCTGACAA TERM 445 372536 - 372510 - T 74 -7.9 -3.97088 | gap 1, overlap 372511 CGGTAGAAGAGTAAA GCGTCCGCGCCA TGGA CGGCGCGG-CTC GAGCCCCCAGGGAGG YE0315 373490 - 372693 - | hypothetical protein TERM 446 373085 - 373112 + g 76 -9.1 -3.81259 | CCGCCTTCTCTGCGA CCACTGGCAGC GGAGTG GCTGTCCGTGG TTTAGTCGGTTCTAT TERM 447 373545 - 373558 + H 80 -2.5 -5.52384 | TATTTATTTGATTAG TAATA TTTT TATTA TTTTTTTACTGCCAA YE0316 373868 - 374410 + | putative DNA-binding protein YE0317 374403 - 375368 + | putative two-component system sensor protein TERM 448 376384 - 376373 - g 75 -3.6 -5.07567 | opp_overlap 376382, overlap 376381 CGACAGTTCAAAAAA CGAC ACTA GCCG CCCGGCGCGTTATCA YE0318 375471 - 378245 + | putative exported iron receptor protein TERM 449 378264 - 378291 + F 78 -4 -5.20333 | opp_overlap 378267, overlap 378265 378267 CACTTTTATTGAAAA CCATCGGGTTGC TTAG GCGGCCCGATAC TTTTTGTTCTGAATC TERM 450 378267 - 378288 + F 78 -10.1 -3.42342 | opp_overlap 378267, overlap 378265 378264 TTTTATTGAAAACCA TCGGGTTGC TTAG GCGGCCCGA TACTTTTTGTTCTGA TERM 451 379208 - 379225 + G 78 -5.5 -4.88918 | opp_overlap 379208 379207 TGGGCTATCAACAAC TGAGTGC GCTG GCACCCA TTTTCTTTGCACTAC YE0319 378373 - 380079 + | putative membrane transport protein ATP-binding component TERM 452 380156 - 380170 + G 71 -8.6 -3.71873 | opp_overlap 380138, overlap 380147 AACACTGCCGGTGCG TGCTGA TCT TCAGCA TTTCACTCTCGGTAA TERM 453 382246 - 382221 - g 73 -5.3 -4.57569 | opp_overlap 382239, overlap 382223 CCACTGGTGGAAAAA TGGCTGGGCAG CTTG CCGCGCAGCGA ACAGCGTTTGCATTG TERM 454 382698 - 382729 + G 87 -11 -4.20516 | gap 1, opp_overlap 382704, overlap 382704 TGGACTGATGCACTG GCACAAGTTGCCAGC GAC GATGGCAACTT-TGC TTTATTGGCTCAAGA TERM 455 382724 - 382704 - g 73 -9.7 -3.31461 | opp_overlap 382698 382704 GATGCACTGGCACAA GTTGCCAGC GAC GATGGCAAC TTTGCTTTATTGGCT TERM 456 382704 - 382724 + G 83 -9.7 -4.21744 | opp_overlap 382704, overlap 382698 GATGCACTGGCACAA GTTGCCAGC GAC GATGGCAAC TTTGCTTTATTGGCT YE0320 380064 - 382850 + | exported Zinc protease YE0321 382982 - 383233 + | antitoxin YefM YE0322 386036 - 383508 - | putative inner-membrane transport protein TERM 457 385740 - 385754 + g 70 -2.1 -4.86001 | AGAGACATTTTGTTT TAGCT TATCT AGCTG TTTTTGTAAGCTAAT TERM 458 387694 - 387679 - g 71 -10.4 -2.76708 | opp_overlap 387675 387671, overlap 387678 387675 GAACGTACAGATAAC CACGCC AGTG GGCGTG CGTCACTGTTGTACA foxA 386263 - 388395 + | ferrioxamine receptor precursor TERM 459 388417 - 388439 + F 100 -13.5 -3.95653 | opp_overlap 388419 CCCTATATTCTTCAA TAGCCCGCA ATCTC TGCGGGCTA TTTATCACATTATTT TERM 460 388437 - 388419 - f 93 -12.4 -3.03771 | opp_overlap 388417 CTATATTCTTCAATA GCCCGCAA TCT CTGCGGGC TATTTATCACATTAT TERM 461 389815 - 389805 - g 77 -6.8 -4.56597 | GCTCTTTCTCAAAAA CGGT GGC ACCG GGCTTACGTATTGGT TERM 462 390329 - 390305 - g 88 -8.5 -4.99638 | opp_overlap 390305, overlap 390310 ATAGGGACAGAAAAA CCAAACCAACC TGG GGTTGGTGAGG TTAATGACAAAGTAC TERM 463 390324 - 390310 - g 85 -10 -4.40526 | opp_overlap 390305, overlap 390305 GACAGAAAAACCAAA CCAACC TGG GGTTGG TGAGGTTAATGACAA YE0324 388865 - 390373 + | putative ATP/GTP-binding protein TERM 464 390403 - 390429 + T 74 -7.9 -3.9749 | gap 1, overlap 390412 CCTCCCTGGGGGCTC GAG-CCGCGCCG TCCG TGGCGCGGACGC TTTACTCTTCTACCT TERM 465 390412 - 390428 + T 73 -10.1 -2.97771 | overlap 390403 GGGCTCGAGCCGCGC CGTCCGT GGC GCGGACG CTTTACTCTTCTACC TERM 466 390492 - 390506 + T 84 -10 -3.76839 | overlap 390468 TTGTCAGCAGTCTGA CCAACC TGA GGTTGG TTTGGCTTGAGATTA hemV 391319 - 390519 - | hemin importer ATP-binding subunit hemU 392316 - 391312 - | hemin transport system permease protein HmuU hemT 393152 - 392313 - | hemin-binding periplasmic protein TERM 467 392749 - 392775 + g 78 -5.9 -4.68908 | gap 1 GCTTGCCCTTTTTCC TGCTGATG-CAG TGCG CTGGCAACAGCA TTTATTTTCACTGCC hemS 394186 - 393149 - | hemin transport protein TERM 468 394271 - 394243 - R 93 -11.9 -3.60419 | opp_overlap 394242 394241 394238 AGGTGGAAATCATAA TCCGGTAATTC GCTGATT GAATTACCGGA AGTGTTATTTCAGAC hemR 396366 - 394303 - | hemin receptor precursor TERM 469 395360 - 395372 + g 76 -9.1 -3.93556 | CGGTTTTCCAGCTTG CCACC TTT GGTGG TTTGCTTGCGTCCCT TERM 470 396492 - 396510 + r 71 -8.8 -3.25942 | CCCTGCCACAGCGGT GCTAGCGG GAA CCGCTACC TTGCTGTCACGACAT hemP 396784 - 396539 - | hemin uptake protein YE0333 397466 - 396816 - | hypothetical protein YE0334 398008 - 397463 - | hypothetical protein TERM 471 397545 - 397565 + g 76 -11.2 -3.13403 | opp_overlap 397560, overlap 397543 TGGAAGGCGGCAAGG CCGTCAGT AAGTA ACTGACGG TGTTCATCACGGCCA TERM 472 397765 - 397752 - G 71 -6.7 -4.25104 | CCGTGGCGATGAAAA CCACT CGGC AGTGG GCCTTTGTGCTCCAA hemN 399318 - 398005 - | coproporphyrinogen III oxidase TERM 473 399167 - 399178 + g 76 -7.2 -4.38712 | opp_overlap 399158, overlap 399152 AGCAATCGCTTATTA GGCG GTAG CGCC TTTTGTAGCAGTGCC TERM 474 399841 - 399852 + H 71 -2.2 -5.2422 | CAGCTGATCGTATGA TCAC TTGC GTGG TTTTTTGCTGTGATT TERM 475 400196 - 400180 - g 79 -3.6 -5.18297 | GAAGAACAAAGAAAA CAGGGC GTCGT GGCCTG CTCGGCGGGTAACCA tdcB 399955 - 400947 + | threonine dehydratase TERM 476 401877 - 401897 + G 80 -6.7 -4.67755 | overlap 401879 CAACCATTTCTCTTC GATGGCCGG TAG CCGGTCGAC TTTTTCAATCACTCT tdcC 400972 - 402300 + | threonine/serine transporter TdcC TERM 477 402343 - 402315 - f 100 -12.5 -4.08945 | opp_overlap 402304 402302, overlap 402304 AGTACGGCGCTAAAA GCCCGTGTTTTAC CCA ATGAAACACGGGC GGAGTAATCACATGA TERM 478 402711 - 402685 - g 80 -2.8 -5.40004 | overlap 402678 GAGGAAATCAAAAAA GTTTCGCCGCTG GCC CCGCTGCATAAC TACGCCAATTTACAC tdcD 402319 - 403575 + | propionate/acetate kinase TERM 479 405417 - 405403 - g 80 -6.4 -4.71426 | opp_overlap 405403 GCTTTATGAAGAAAA TCAGCA AGC TGCCGA CTTATCGTCATGCGG tdcE 403626 - 405920 + | keto-acid formate acetyltransferase TERM 480 405931 - 405953 + T 73 -9.1 -3.5518 | opp_overlap 405931 TGTAATCTCACCACA GCCCTCCTT GATAA AGGGGGGGC TTGTGTCGCTATTCG TERM 481 406013 - 405998 - T 100 -9 -5.42514 | opp_overlap 405998 GCAGAAAGCAAAAAA CCAGCT ATTA AGCTGG TTTGAGGTTAATGAC TERM 482 405998 - 406013 + T 75 -9 -3.67976 | opp_overlap 405998 GCAGAAAGCAAAAAA CCAGCT ATTA AGCTGG TTTGAGGTTAATGAC TERM 483 406157 - 406185 + T 100 -13.3 -4.26188 | opp_overlap 406163 GTTTGTCAGCAGTCT GAAGAACACCG ACCAGTC CGGTGTTCTTC TTTTAAATATGTAGG YE0340 406637 - 406326 - | hypothetical protein TERM 484 406424 - 406406 - G 73 -10.3 -3.1739 | opp_overlap 406400 406399 ACATGACTTCAGCAA CATGCGG GTTTT CCGCATG GCTGGTTACTGCTTC YE0341 407421 - 406648 - | putative dehydrogenase/reductase TERM 485 407456 - 407475 + r 100 -15 -3.14132 | opp_overlap 407456 GAATGCGGGAGGATA CCGGCGAC ACAC GTCGCCGG TTAATGAAGCAAGGC TERM 486 407475 - 407456 - R 100 -15 -2.79133 | opp_overlap 407456 GAATGCGGGAGGATA CCGGCGAC ACAC GTCGCCGG TTAATGAAGCAAGGC YE0342 408471 - 407491 - | putative aldo/keto reductase TERM 487 407645 - 407667 + g 71 -4 -4.82901 | opp_overlap 407665, overlap 407649 TGGAGTTTTGTTGTG CCGGGGATCG GTG CAATCCATGG TTTTTGTGCCAGCAA YE0343 408604 - 409497 + | LysR family transcriptional regulator TERM 488 411347 - 411321 - T 85 -7.2 -4.90002 | opp_overlap 411321 411329 TAAGACACAATAAAA CCGAAGTTTGTC ATC GACATTCTCCGG TTTATTATTCCCCTA TERM 489 411501 - 411517 + T 76 -10.9 -2.62616 | opp_overlap 411500 411498 411495 TCGAACCAAGGACAC GGGGATT TTC AATCCCC TGCTCTACCGACTGA YE0346 412262 - 411687 - | putative transcriptional regulator glxK 412574 - 413737 + | putative glycerate kinase TERM 490 413761 - 413727 - T 70 -8 -3.71804 | gap 1, overlap 413725 413730 GGAAAGCTGAAAATA CGAGTGGATGAGC CGGACTATAT GCTCATCCAC-CG TCGGGATATCAATCA TERM 491 413759 - 413730 - T 71 -9.4 -2.94739 | overlap 413727 413725 AAGCTGAAAATACGA GTGGATGAGC CGGACTATAT GCTCATCCAC CGTCGGGATATCAAT dipZ 415521 - 413785 - | thiol:disulfide interchange protein precursor TERM 492 414646 - 414615 - G 73 -5 -4.8048 | overlap 414618 CGCCCATAGCAAAAA CACCGGCCAGCGAA CCGC CCCGCTGGCTACTG CTCCACTGTACCAAT TERM 493 415493 - 415479 - G 83 -10 -4.25104 | GCGGCGCGAGTAAAA TGCTGC ACA GCAGCA GAATCAGAGTAATGA YE0349 415799 - 415497 - | divalent-cation tolerance protein CutA TERM 494 415996 - 415970 - R 93 -12.3 -2.91467 | AAATCGCCAATGAGA GTGGGGCGCAA ATGGA TTGCGCCCCAT AAAGCAGATTACAGA b4138 417306 - 416005 - | anaerobic C4-dicarboxylate transporter TERM 495 417062 - 417072 + g 71 -4 -4.82855 | ATGTGTTTTGGATTC TTAC GCA GTAA TTTTTCAGTTTGCTG TERM 496 417373 - 417401 + r 78 -10.4 -3.31144 | gap 2, opp_overlap 417373 GCCCGAAAGTAAAAA GGCACGC-TG-TCC AGA GGATCATGCGTGCC TTATAGGGCTACCGG TERM 497 417401 - 417373 - R 100 -10.4 -4.98531 | gap 2, opp_overlap 417373 GCCCGAAAGTAAAAA GGCACGC-TG-TCC AGA GGATCATGCGTGCC TTATAGGGCTACCGG aspA 418862 - 417426 - | aspartate ammonia-lyase TERM 498 418282 - 418312 + g 83 -9 -4.44461 | GTCATTGGTACCGCA TCCTGCAATTGGGT ACG GCCCATTTTCAGGA TTTTCTCGAATTCTT TERM 499 419221 - 419208 - H 78 -2.3 -5.46129 | TAATAAAGGAAAAAA CAGCG TTAA CGCCA GCCGGGTCAAGGTTT YE0352 419304 - 419831 + | FxsA groES 420084 - 420377 + | co-chaperonin GroES groEL 420434 - 422086 + | chaperonin GroEL TERM 500 422138 - 422159 + F 100 -13.7 -5.252 | opp_overlap 422132 422138 AGCTATAAACCTAAA GCGAGCGGG GTAA CCTGCTCGC TTTTTTATGGAAATA TERM 501 422159 - 422138 - f 95 -11.5 -3.89617 | opp_overlap 422138, overlap 422132 AGCTATAAACCTAAA GCGAGCGGG GTAA CCTGCTCGC TTTTTTATGGAAATA TERM 502 422259 - 422281 + F 83 -9.2 -3.94746 | opp_overlap 422259 422258 422263 422264, overlap 422264 TTCAAATTTCATAAC TAAACGCGCT AAA AGCGCTTTTA TTTCATTCAGTGTGA TERM 503 422264 - 422276 + F 100 -9.1 -4.99947 | opp_overlap 422263 422259 422258 422264, overlap 422259 ATTTCATAACTAAAC GCGCT AAA AGCGC TTTTATTTCATTCAG YE0355 422468 - 422806 + | putative lipoprotein TERM 504 422821 - 422846 + T 84 -11.1 -3.69283 | opp_overlap 422818, overlap 422822 422824 ATATCTGAAGGACGC ACAGGGGATGC CATC GCGTCCCCTGA TTCTTCCGTGGGTTG TERM 505 422822 - 422845 + T 100 -14.6 -2.81088 | opp_overlap 422818, overlap 422821 422824 TATCTGAAGGACGCA CAGGGGATGC CATC GCGTCCCCTG ATTCTTCCGTGGGTT TERM 506 422824 - 422843 + T 83 -11.4 -2.94872 | opp_overlap 422818, overlap 422822 422821 TCTGAAGGACGCACA GGGGATGC CATC GCGTCCCC TGATTCTTCCGTGGG YE0356 423911 - 422874 - | hypothetical protein TERM 507 423108 - 423093 - G 73 -7.6 -4.0031 | ACCCGCATCAAACAA GGCATT ACTT AATGCC GCCAAGACCTCGTCA b4147 423947 - 424513 + | elongation factor P TERM 508 424557 - 424581 + F 76 -10.8 -2.62933 | opp_overlap 424557 424562, overlap 424562 GCGCTGAGAATGAAA GAAAACCGCT TAATC GGCGGTTTTC TGCTATCAGGGGTTA TERM 509 424581 - 424557 - f 86 -10.1 -3.9941 | opp_overlap 424557 424562, overlap 424562 GCGCTGAGAATGAAA GAAAACCGC TTAATCG GCGGTTTTC TGCTATCAGGGGTTA TERM 510 424576 - 424562 - f 74 -4.2 -5.02357 | opp_overlap 424557 424562, overlap 424557 GAGAATGAAAGAAAA CCGC TTAATCG GCGG TTTTCTGCTATCAGG ecnB 424699 - 424830 + | entericidin B precursor TERM 511 424849 - 424870 + F 82 -5.7 -4.96773 | overlap 424850 424851 GCAAGTCGCATTGTT ATCGGCGGC AATT GTCGCCGGC TTTATTTTTGATTGA TERM 512 424850 - 424869 + F 76 -9.2 -3.56437 | overlap 424849 424851 CAAGTCGCATTGTTA TCGGCGGC AATT GTCGCCGG CTTTATTTTTGATTG TERM 513 424851 - 424868 + F 74 -10.5 -2.72235 | overlap 424850 424849 AAGTCGCATTGTTAT CGGCGGC AATT GTCGCCG GCTTTATTTTTGATT sugE 425009 - 425323 + | quaternary ammonium compound-resistance protein SugE TERM 514 425330 - 425345 + T 89 -10.4 -3.91984 | opp_overlap 425330 GCCTCATAAATTATA GGGGAG GGAG CTCCCC TTGTTTAACCCATAT TERM 515 425345 - 425330 - T 76 -10.4 -3.05997 | opp_overlap 425330 GCCTCATAAATTATA GGGGAG GGAG CTCCCC TTGTTTAACCCATAT YE0360 425864 - 425325 - | outer membrane lipoprotein Blc TERM 516 425994 - 425973 - R 100 -13.7 -4.85782 | GTGCTGAAAAAGAAA CGGCCCGCT AAAG AGCAGGCCG CAGATCAGGCATGAA b4151 426369 - 426013 - | fumarate reductase subunit D b4152 426778 - 426386 - | fumarate reductase subunit C TERM 517 426426 - 426412 - G 70 -7.8 -3.8062 | CAACGGCCAGAATAA TCGCGG TAG CCACGA TAGTCACAACCCACA TERM 518 426739 - 426717 - G 81 -6.2 -4.97402 | overlap 426708 TAAAAGCGATAAAAA CCGAGCTGTT GCC ACCAGTTCGG GGCCATGGTACGGAC b4153 427529 - 426795 - | fumarate reductase iron-sulfur subunit b4154 429345 - 427522 - | fumarate reductase flavoprotein subunit b4155 429789 - 430766 + | lysyl-tRNA synthetase TERM 519 430807 - 430833 + T 77 -3.6 -5.10968 | opp_overlap 430807 CGGTGTTAAAAGAAA TGCCCTGACC CTTCACA GAACAGGGCA TTTTTGTGTCTTACT TERM 520 430833 - 430807 - T 77 -6.5 -4.64861 | opp_overlap 430807 CGGTGTTAAAAGAAA TGCCCTGACCC TTCAC AGAACAGGGCA TTTTTGTGTCTTACT YE0366 434091 - 430861 - | hypothetical protein TERM 521 433882 - 433921 + g 78 -11.5 -3.06492 | gap 1, opp_overlap 433880, overlap 433896 GGATGTGGACATATT GTTAGGCACCGGCAGGGG TTTAT CCCCTTCCTGTGC-TAAC TGTTGGCGTAGCTCG psd 435142 - 434261 - | phosphatidylserine decarboxylase TERM 522 434566 - 434548 - G 73 -7.4 -4.28994 | TAGCACCCACTAAAA TTTGGGCC ATC GGGCCAAA GGTGGTATCAAAGAT TERM 523 435205 - 435181 - R 71 -9.9 -2.59069 | overlap 435180 435178 AGCTATAAAAATTAG GGGGCGCATTG TAT CTATGCGCCAC GATATAAGTCATTAA YE0368 436303 - 435251 - | ribosome-associated GTPase b4162 436481 - 437026 + | oligoribonuclease TERM 524 437378 - 437362 - Tf 76 -10.9 -2.62616 | TCAGTTGGTAGAGCA CGACCTT GCC AAGGTCG GGGTCGCGAGTTCGA TERM 525 437496 - 437466 - Tf 75 -5.5 -4.80656 | ATGAATAATATAAAA GTGATGCGTTTTT TCGTT AATAACGCATGAC AGCGACGCGGGAATA TERM 526 437545 - 437529 - Tf 76 -10.9 -2.62616 | TCAGTTGGTAGAGCA CGACCTT GCC AAGGTCG GGGTCGCGAGTTCGA TERM 527 437695 - 437679 - Tf 76 -10.9 -2.62616 | TCAGTTGGTAGAGCA CGACCTT GCC AAGGTCG GGGTCGCGAGTTCGA YE0371 439225 - 438071 - | putative iron-sulfur cluster-binding protein YE0372 439224 - 440738 + | hypothetical protein TERM 528 441136 - 441164 + G 79 -10.9 -3.60104 | overlap 441134 CATCTGGCTTATCAG GCCGCAGGGCGAG AGG CTCGTCTGGTGGC TATTTCTGATGTGGG YE0373 440749 - 441219 + | putative ATPase YE0374 441320 - 443182 + | putative N-acetylmuramoyl-L-alanine amidase-family protein mutL 443198 - 445105 + | DNA mismatch repair protein TERM 529 445599 - 445617 + G 100 -3.9 -6.23545 | gap 1, overlap 445602 AATGATCCCCAACGG CTCTCCAG AGCA CTGGA-AG TTTTTTTTATTTCAG miaA 445098 - 446039 + | tRNA delta(2)-isopentenylpyrophosphate transferase hfq 446155 - 446460 + | RNA-binding protein Hfq TERM 530 446520 - 446531 + F 75 -7.2 -4.33165 | opp_overlap 446481, overlap 446529 TCAGGCTTATGTTCT CCGC ACTA GCGG TTTTGATCCGTTTGA TERM 531 446641 - 446627 - g 77 -4.2 -5.0916 | opp_overlap 446627, overlap 446629 CTCGCAAGACAAAAA CTCAGA GGA TCTGCG TGAGTTCGAAGCGCT hflX 446559 - 447860 + | putative GTPase HflX YE0379 448234 - 449241 + | hypothetical protein YE0380 449245 - 450249 + | FtsH protease regulator HflC TERM 532 450344 - 450327 - f 86 -9.8 -3.96068 | opp_overlap 450327 TGACTGTAATAACAA GGCCCG TTCACG CGGGCC TTTTCTATTTGGGGC TERM 533 450327 - 450344 + F 100 -10.5 -4.78848 | opp_overlap 450327 TGACTGTAATAACAA GGCCCGT TCAC GCGGGCC TTTTCTATTTGGGGC YE0381 450388 - 450588 + | hypothetical protein TERM 534 451058 - 451048 - g 77 -6.8 -4.57341 | AATGCGCGTGAAAAA GCAC GTG GTGC AAAAGCAATCGGTAC TERM 535 451200 - 451177 - g 82 -10.4 -3.89336 | overlap 451181 GCAATCAAACTGAAA GAAATTGTGG ATTA CCACAACTTC CAGTTGGTGCACTAC TERM 536 451196 - 451181 - g 81 -7.6 -4.53439 | overlap 451177 TCAAACTGAAAGAAA TTGTGG ATTA CCACAA CTTCCAGTTGGTGCA adeK 450688 - 451986 + | adenylosuccinate synthetase TERM 537 452025 - 452054 + F 100 -13.7 -3.70068 | opp_overlap 452032, overlap 452028 TCAGAATTCAGATGC TAATGAACCGGGC TTAT GTCCGGTTCATTG TTTCAGATTCTCCTG TERM 538 452028 - 452051 + F 100 -13.2 -3.97689 | opp_overlap 452032, overlap 452025 GAATTCAGATGCTAA TGAACCGGGC TTAT GTCCGGTTCA TTGTTTCAGATTCTC YE0383 452266 - 452691 + | transcriptional repressor NsrR TERM 539 454276 - 454286 + G 73 -8.2 -3.85817 | overlap 454281 TTCTGGCGAATATCG CCGC AGC GCGG TTTGTGGAAAAACAT TERM 540 454852 - 454867 + G 75 -5.4 -4.70887 | CCGGCTTTGGTTTCT TCGTCC GTCT GGATGA TTTGTTTATTGATGG rnr 452871 - 455417 + | exoribonuclease R TERM 541 455426 - 455458 + F 100 -10.6 -4.37506 | gap 1 CCAATAATGGCCTGT TGATTGTCGGGCGGC CTTG GTCGCCCG-CATTCA TTTATATTTAATCAT TERM 542 455760 - 455740 - g 70 -9.7 -3.14962 | overlap 455738 455737 GTATCAGGAAAATGA CTTGCCAGC ATT GCTGGAAAG TGTAGAAACCCCCTT YE0385 455489 - 456229 + | 23S rRNA (guanosine-2'-O-)-methyltransferase TERM 543 456405 - 456384 - f 86 -11.7 -3.35813 | opp_overlap 456384 TGGCATTTCAATCAA GCCAACATT TCCG AATGTTGGC TTTTTGTTTTTATTT TERM 544 456384 - 456405 + F 100 -11.7 -5.77734 | opp_overlap 456384 TGGCATTTCAATCAA GCCAACATT TCCG AATGTTGGC TTTTTGTTTTTATTT TERM 545 457048 - 457036 - g 71 -9.1 -3.60296 | opp_overlap 457034 CACCGCTATTCCAAA GCTGG ATA CCAGC ACTACTTTCAGATCG aidB 456561 - 458204 + | isovaleryl CoA dehydrogenase YE0387 458537 - 458229 - | putative lipoprotein YE0388 458723 - 459472 + | esterase TERM 546 459493 - 459477 - T 100 -10.8 -5.30686 | AATATCTATAAAAAA CCCCCG ACAAG CGGGGG AATGGGAATGAGTAT YE0389 459844 - 459557 - | hypothetical protein TERM 547 460214 - 460235 + H 74 -8.1 -4.00042 | opp_overlap 460206 460214 460218 GAAATATTTAGTAGA CTAATGGAT CTAC ATCCATTGG TTATTTAATGAACAA TERM 548 460780 - 460755 - g 71 -9.1 -3.50832 | gap 1, overlap 460747 460753 GGTTAAAGCGAAAGA CGAACGCCGTGA GCG TCACGAC-TTCG CGTCAGAAGCCAATG rpsF 460435 - 460827 + | 30S ribosomal protein S6 priB 460832 - 461152 + | primosomal replication protein N rpsR 461157 - 461384 + | 30S ribosomal protein S18 rplI 461424 - 461876 + | 50S ribosomal protein L9 TERM 549 461898 - 461926 + T 100 -14 -3.43042 | opp_overlap 461903, overlap 461903 CTGCTGTAAACCTGT TAAAACGCCAGC CTCGT GCTGGCGTTTTG CTTTTTGGTCAAGGG TERM 550 461921 - 461903 - T 100 -11.7 -4.12942 | opp_overlap 461898 461903 GTAAACCTGTTAAAA CGCCAGC CTCGT GCTGGCG TTTTGCTTTTTGGTC TERM 551 461903 - 461921 + T 100 -11.7 -4.80167 | opp_overlap 461903, overlap 461898 GTAAACCTGTTAAAA CGCCAGC CTCGT GCTGGCG TTTTGCTTTTTGGTC YE0396 462401 - 461952 - | hypothetical protein YE0397 463317 - 462544 - | hypothetical protein fklB 463604 - 464224 + | peptidyl-prolyl cis-trans isomerase TERM 552 464243 - 464275 + T 100 -13.5 -4.35742 | opp_overlap 464250, overlap 464250 CCACGCGCAGCGACA TGAGAAAGGGCGACG TGA TGTCGCCCTTTTGCA TTTTAATACTTCAAT TERM 553 464268 - 464250 - T 100 -11.7 -4.02334 | opp_overlap 464243 464250 CAGCGACATGAGAAA GGGCGAC GTGAT GTCGCCC TTTTGCATTTTAATA TERM 554 464250 - 464268 + T 100 -12.4 -4.44277 | opp_overlap 464250, overlap 464243 CAGCGACATGAGAAA GGGCGACG TGA TGTCGCCC TTTTGCATTTTAATA cpdB 466269 - 464296 - | bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein amtA 466745 - 467488 + | PAPS (adenosine 3'-phosphate 5'-phosphosulfate) 3'(2'),5'-bisphosphate nucleotidase TERM 555 467509 - 467535 + T 100 -13 -3.80733 | overlap 467517 CTGTTTCACAAGCTG GTGCAGTTGGTC GAT GACCTGCTGCAC TTCTTCTGCGGTCAG YE0401 468054 - 467491 - | hypothetical protein TERM 556 467854 - 467896 + g 73 -3.5 -4.87665 | opp_overlap 467862 GCGGCCAGCAATATG CTGG-ACAACTCGCACTTTGC CGG GCAAT-TGCGAGCTATTCCAG TTTTTATAGCTAAAC YE0402 468378 - 468581 + | hypothetical protein TERM 557 468600 - 468631 + T 79 -8.6 -4.10161 | opp_overlap 468598 468603, overlap 468602 468605 CATCCCCAACCAATT GAATTGCGGCCCCT ATTT AGGGGCCGCTACTG TTTTCAGACATGATG TERM 558 468602 - 468629 + T 84 -11.2 -3.64716 | opp_overlap 468598 468603, overlap 468600 468605 TCCCCAACCAATTGA ATTGCGGCCCCT ATTT AGGGGCCGCTAC TGTTTTCAGACATGA TERM 559 468628 - 468603 - T 100 -14.7 -3.23899 | opp_overlap 468602 468600 468605, overlap 468598 CCCCAACCAATTGAA TTGCGGCCCCT ATTT AGGGGCCGCTA CTGTTTTCAGACATG TERM 560 468605 - 468626 + T 100 -17.3 -2.93623 | opp_overlap 468603 468598, overlap 468602 468600 CCAACCAATTGAATT GCGGCCCCT ATTT AGGGGCCGC TACTGTTTTCAGACA YE0403 469997 - 468666 - | hypothetical protein msrA 470923 - 470285 - | methionine sulfoxide reductase A TERM 561 471626 - 471637 + G 76 -7.2 -4.46615 | overlap 471621 471620 TCGCCAAAGTGGTTC CCGG AGAG CCGG TTTTGATTGCTGGTG YE0405 471364 - 473064 + | hypothetical protein YE0406 473166 - 476945 + | hypothetical protein YE0407 476948 - 477310 + | hypothetical protein TERM 562 477325 - 477342 + T 73 -8.4 -3.67976 | opp_overlap 477325 GATAAGCAAAAAAAA CACCGC ACAATG GCGGTG TTTGAGGTTAATGAC TERM 563 477342 - 477325 - T 100 -8.4 -5.98781 | opp_overlap 477325 GATAAGCAAAAAAAA CACCGC ACAATG GCGGTG TTTGAGGTTAATGAC TERM 564 477423 - 477449 + T 72 -7.2 -3.9749 | gap 1, overlap 477422 CCTCCCTGGGGGCTC GAG-CCGCGCC CTCCCT GGCGCGGACGC TTTACTCTTCTACCT TERM 565 477531 - 477514 - T 73 -8.4 -3.58343 | opp_overlap 477508 477514 GTCAGCAGTCTGAAA CACCGC ATAATG GCGGTG TTTTTGCTATGTATT TERM 566 477514 - 477531 + T 100 -8.4 -4.87037 | opp_overlap 477514, overlap 477508 GTCAGCAGTCTGAAA CACCGC ATAATG GCGGTG TTTTTGCTATGTATT ppa 478096 - 477569 - | inorganic pyrophosphatase YE0409 478386 - 479966 + | methyl-accepting chemotaxis protein TERM 567 479992 - 479972 - T 100 -9.7 -5.60993 | opp_overlap 479974 CGTCGCATAAAAAAA CAGCGGC TTAGTGG GCCGCTG TTGAGGTTAATGACA TERM 568 480138 - 480157 + T 100 -11.4 -4.55023 | opp_overlap 480138 GTCAGCAGTCTGAAA CAGCGGCT TAGT GGCCGCTG TTTTCTAATGTTAGC TERM 569 480157 - 480138 - T 84 -10.7 -3.58343 | opp_overlap 480138 GTCAGCAGTCTGAAA CAGCGGC TTAGTG GCCGCTG TTTTCTAATGTTAGC fbp 481191 - 480178 - | fructose-1,6-bisphosphatase mpl 481361 - 482746 + | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-m eso-diaminopimelate ligase TERM 570 482779 - 482761 - T 100 -11.6 -5.67967 | overlap 482762 AGCAGGATAAAAAAA GCCCCCGC ATA GCGGGGGT AAAAGGGTTCGTCGG TERM 571 482778 - 482762 - T 100 -15.1 -3.99153 | overlap 482761 GCAGGATAAAAAAAG CCCCCGC ATA GCGGGGG TAAAAGGGTTCGTCG TERM 572 482961 - 482979 + T 86 -8.8 -4.39227 | opp_overlap 482961 482959 482958 CTAAAATAGAAAGTA TGCCCCTT ATT ACGGGGCA TTTACTTTTATTTCT YE0412 483263 - 483000 - | hypothetical protein TERM 573 483440 - 483426 - R 76 -2.8 -5.28166 | CAAAAGGAATAAAAA CTGATT AAA AAACAG CAGTTTTAAGAAAAA TERM 574 483657 - 483639 - R 100 -8.8 -4.63172 | opp_overlap 483639 TACCAAATGAGAAAA TGCGGCAT ATA AGGCCGCA TCTATAAATTCGTGG argR 484147 - 483677 - | arginine repressor mdh 484611 - 485546 + | malate dehydrogenase TERM 575 485559 - 485577 + T 95 -13.2 -3.05596 | TAAATCAGTGTAGTA GGGGCTAT ATA ATAGCCCC TTGAATGACACCATC TERM 576 485595 - 485617 + T 100 -7.7 -5.95946 | opp_overlap 485595 GAATGACACCATCAA CCGCCGATG CATTT TATTGGCGG TTTTTTTATTCTTCG TERM 577 486448 - 486480 + T 74 -10 -3.10761 | gap 1, opp_overlap 486455, overlap 486444 486455 AGGGGTTGTTGCCAA TGGATAACTCCGGCA ATGA TACCGGAGTT-TCCA TATGATTTCTTAAAA TERM 578 486474 - 486455 - T 78 -10 -3.41878 | opp_overlap 486448 486444 486455 GTTGCCAATGGATAA CTCCGGCA ATGA TACCGGAG TTTCCATATGATTTC TERM 579 486455 - 486474 + T 72 -7.8 -3.75229 | opp_overlap 486455, overlap 486448 486444 GTTGCCAATGGATAA CTCCGGCA ATGA TACCGGAG TTTCCATATGATTTC cel 487461 - 486490 - | octaprenyl diphosphate synthase rplU 487721 - 488032 + | 50S ribosomal protein L21 rpmA 488052 - 488309 + | 50S ribosomal protein L27 TERM 580 488338 - 488360 + F 100 -12 -4.84529 | opp_overlap 488338 TGTAAATAGATGTAA GCCCTGCAAT TTC GTTGCGGGGC TTTTTACATTTCTGG YE0420 488397 - 489356 + | hypothetical protein TERM 581 490215 - 490225 + G 71 -6.8 -4.17048 | opp_overlap 490215 AAACCTTGCACAGAA GCCA CGC TGGC TTGTTTTCAACAAGA obgE 489388 - 490560 + | GTPase ObgE TERM 582 490603 - 490624 + T 100 -10.1 -4.86731 | opp_overlap 490603, overlap 490618 GTAGGATGTGAACAA GGGCTGCCA TTCG TGGTGGCCC TTTTGTTTGCAAGAG basS 491725 - 490664 - | sensor protein BasS/PmrB basR 492384 - 491725 - | DNA-binding transcriptional regulator BasR dacB 493838 - 492390 - | D-alanyl-D-alanine carboxypeptidase/endopeptidase TERM 583 492447 - 492433 - G 71 -9.2 -3.53091 | opp_overlap 492443 AGTCGGCTTTCGAAA CGCACC AAT GGCGCG CGGCGATTTTTTTGA TERM 584 492443 - 492453 + g 83 -2.4 -5.63374 | opp_overlap 492433 CGAAACGCACCAATG GCGC GCG GCGA TTTTTTTGATCTTCA TERM 585 494246 - 494231 - g 74 -2.6 -5.10933 | gap 1, overlap 494243 CGATTTAAAAGAAAA TGCA-GA ATA TCATGCA GCCCGTGAGCAGCAA greA 494097 - 494573 + | transcription elongation factor GreA TERM 586 494659 - 494634 - T 100 -10.5 -4.88405 | opp_overlap 494640, overlap 494635 AAGTTGTAAAGAAAA GTAAAAGGCCG CTTG CGGCCTTTTAT CAGAACAAAGTGCAT TERM 587 494658 - 494635 - T 100 -14 -3.51958 | opp_overlap 494640, overlap 494634 AGTTGTAAAGAAAAG TAAAAGGCCG CTTG CGGCCTTTTA TCAGAACAAAGTGCA TERM 588 494640 - 494653 + T 88 -9.5 -4.36914 | opp_overlap 494635 494634 TAAAGAAAAGTAAAA GGCCG CTTG CGGCC TTTTATCAGAACAAA TERM 589 494679 - 494669 - T 74 -6.8 -4.35483 | opp_overlap 494668 494669 TTTTATCAGAACAAA GTGC ATG GCAC CTTTTCTCTAAAACA YE0426 494995 - 494702 - | hypothetical protein TERM 590 495240 - 495228 - g 77 -4.7 -4.99035 | opp_overlap 495239, overlap 495230 TCAGGCACAGAAAAA GGGGC TAC GCTCC CGCGCCTGGTTTAAA rrmJ 495142 - 495771 + | 23S rRNA methyltransferase J TERM 591 495916 - 495934 + G 73 -8.2 -3.83205 | GCGAATCGAATGGCC GTAGAGTG GAT TACTCTAC TTTCATGTCCGACGT hflB 495828 - 497762 + | ATP-dependent metalloprotease TERM 592 497803 - 497820 + F 100 -6.9 -5.86609 | opp_overlap 497803 AGTGATTAATATAAA CCTCGGG CTTG CTCGGGG TTTTTCTTTTTTTAA folP 497847 - 498680 + | dihydropteroate synthase TERM 593 499579 - 499589 + G 71 -6.8 -4.15044 | opp_overlap 499578 TAGCCTTGAAAGAGC TGGG CAT CCCA TTTGTTCGCGCCAAA glmM 498690 - 500030 + | phosphoglucosamine mutase secG 500254 - 500589 + | preprotein translocase subunit SecG TERM 594 500903 - 500917 + F 100 -7.2 -5.79526 | opp_overlap 500905 TCCGGCCCCCGCAAC CACTTT CCT AAAGTG TTTTTTTTCAAATGT TERM 595 501015 - 501003 - f 77 -10.5 -3.07307 | GAAAGTTGTACCGAA GCCGC TTT GCGGC AAACAGGGTCCAGTT TERM 596 501032 - 501060 + F 100 -12.5 -3.90744 | opp_overlap 501038 501039, overlap 501039 AACAGGGTCCAGTTG CATAAAGCCCCGA ATT TCGGGGTTTTTTG TTATTTGACAGCAGA TERM 597 501054 - 501038 - f 72 -7.9 -3.87815 | opp_overlap 501032 501039, overlap 501039 GTCCAGTTGCATAAA GCCCCGA ATT TCGGGGT TTTTTGTTATTTGAC TERM 598 501039 - 501053 + F 100 -11.4 -5.72254 | opp_overlap 501038 501039, overlap 501032 TCCAGTTGCATAAAG CCCCGA ATT TCGGGG TTTTTTGTTATTTGA TERM 599 501053 - 501039 - f 83 -11.4 -2.92475 | opp_overlap 501039 501032, overlap 501038 TCCAGTTGCATAAAG CCCCGA ATT TCGGGG TTTTTTGTTATTTGA TERM 600 501082 - 501095 + F 100 -5.9 -5.80248 | GACAGCAGAATCACT GGGCT ATTA GGCCC TTTTTTTATGTCTTG YE0432 501114 - 501572 + | hypothetical protein nusA 501594 - 503081 + | transcription elongation factor NusA infB 503106 - 505784 + | translation initiation factor IF-2 TERM 601 505809 - 505832 + F 100 -16.8 -3.48924 | ATTTGCTTATATCCA TTTGGGGGGC CTTG GCCCCCCAAA TTGTCTGGAGAATCC rbfA 505851 - 506261 + | ribosome-binding factor A truB 506261 - 507250 + | tRNA pseudouridine synthase B TERM 602 507537 - 507516 - g 77 -2.9 -5.31275 | opp_overlap 507521 507531, overlap 507519 507521 TCCGAGCACAAAAAA GATCACCAC AGTC GTCGTGGTC TGCTGCGTATGGTAT rpsO 507372 - 507641 + | 30S ribosomal protein S15 TERM 603 507663 - 507679 + F 100 -13.7 -5.24129 | opp_overlap 507663 GAGTTTCGGGAGAAA GGGGCCA AAT TGGCCCC TTTTTTCTAAGAAGC TERM 604 507679 - 507663 - f 100 -13.7 -3.86015 | opp_overlap 507663 GAGTTTCGGGAGAAA GGGGCCA AAT TGGCCCC TTTTTTCTAAGAAGC pnp 507904 - 510024 + | polynucleotide phosphorylase/polyadenylase TERM 605 510034 - 510065 + F 100 -18.2 -3.48276 | opp_overlap 510028 GAGTAATTAGTATTC CACAGCTCCTTACT CATG AGTGAGGAGCTGTG TTATCTCGAGGGCAG nlpI 510147 - 511031 + | lipoprotein NlpI csdA 511217 - 513190 + | ATP-dependent RNA helicase DeaD TERM 606 513247 - 513216 - f 88 -11 -3.78775 | opp_overlap 513224, overlap 513218 513224 TCTTTGATGATTAAA CATAAAAACCAGCC TTCG GGCTGGTTTTTTTA TGCGTATCAAACGGG TERM 607 513245 - 513218 - f 89 -11.4 -3.48024 | opp_overlap 513224, overlap 513216 513224 TTTGATGATTAAACA TAAAAACCAGCC TTCG GGCTGGTTTTTT TATGCGTATCAAACG TERM 608 513239 - 513224 - f 100 -10.4 -5.22289 | opp_overlap 513224, overlap 513218 513216 GATTAAACATAAAAA CCAGCC TTCG GGCTGG TTTTTTTATGCGTAT TERM 609 513224 - 513239 + F 100 -10.4 -5.65177 | opp_overlap 513224 513218 513216 GATTAAACATAAAAA CCAGCC TTCG GGCTGG TTTTTTTATGCGTAT YE0441 513550 - 513822 + | putative lipoprotein TERM 610 514208 - 514179 - T 75 -8.7 -3.57462 | opp_overlap 514181 514186, overlap 514181 514186 GACTTTATGGTTAAA CATAAAACCAGCC CTGG AGCTGGTTTTATT ATATCTCTAATTCAT TERM 611 514181 - 514206 + T 82 -10.6 -3.66727 | opp_overlap 514179 514181 514186, overlap 514186 CTTTATGGTTAAACA TAAAACCAGC CCTGGA GCTGGTTTTA TTATATCTCTAATTC TERM 612 514206 - 514181 - T 86 -11.3 -3.36515 | opp_overlap 514181 514186, overlap 514179 514186 CTTTATGGTTAAACA TAAAACCAGCC CTGG AGCTGGTTTTA TTATATCTCTAATTC TERM 613 514186 - 514201 + T 80 -6.1 -4.88495 | opp_overlap 514181 514179 514186, overlap 514181 TGGTTAAACATAAAA CCAGC CCTGGA GCTGG TTTTATTATATCTCT TERM 614 514201 - 514186 - T 82 -6.8 -4.78848 | opp_overlap 514186 514181, overlap 514181 514179 TGGTTAAACATAAAA CCAGCC CTGG AGCTGG TTTTATTATATCTCT YE0442 515260 - 514238 - | hypothetical protein TERM 615 514795 - 514826 + g 77 -8.8 -4.19238 | gap 1 CGGGAACCGCTTGGA CTGCTT-GCCCAGGT TGC ACCTCGGCAAAGTAG TTTTGCAGTTCGCGC TERM 616 516194 - 516184 - g 87 -6.8 -5.00884 | ATGTGGCTGAAAAAA CAGC CGC GCTG GAAACCGCACGTATC YE0443 515727 - 516887 + | multidrug efflux protein TERM 617 518693 - 518672 - g 74 -6.7 -4.41241 | gap 1, overlap 518675 TAAAGCGGTAGAAAA CTATTTCCTG ACC CAGGAAA-AG GACAATACCAAAGCG TERM 618 518691 - 518675 - g 70 -9.5 -3.17598 | overlap 518672 AGCGGTAGAAAACTA TTTCCTG ACC CAGGAAA AGGACAATACCAAAG TERM 619 519917 - 519932 + G 73 -4.6 -4.76041 | overlap 519916 CGGTACCTTAACGGC GACCGC GCTG GCCGTC TTTTTCGTCCCTCTA YE0444 516891 - 520016 + | multidrug efflux protein ibeB 520018 - 521424 + | outer membrane efflux lipoprotein TERM 620 521435 - 521457 + F 95 -11.3 -3.76586 | overlap 521433 ACTAGTCTCTCCTTC TGCGGGTGC ATAAC GTACCCGCA TCTTTATCTTTAGCA TERM 621 522693 - 522681 - g 77 -2.7 -5.28176 | TTTACTGATAAAAAA TGCAA TAA TTACA CTGCCGTTTACTCTG TERM 622 522806 - 522796 - g 73 -8.2 -3.85698 | opp_overlap 522805 GTGGCTCGTCATAAA GCCC TGC GGGC GATGAATATTGCTTT TERM 623 522990 - 523005 + G 79 -3.2 -5.34055 | TATTTTAAATATCTT TGCAGT AATG ACGGCA TTTTTTGGTGTTTAT YE0447 522019 - 523344 + | putative transmembrane transport protein YE0448 523394 - 524710 + | hypothetical protein TERM 624 524728 - 524759 + T 95 -9.4 -4.54404 | opp_overlap 524728 524729, overlap 524731 ATTGATAAGTATGAA GGGCAGGGAGGGCA ATGC TGCTCTCCCTGTTA TTTATTATTGGTTTA TERM 625 524731 - 524756 + T 100 -15.5 -4.34486 | opp_overlap 524729 524728, overlap 524728 GATAAGTATGAAGGG CAGGGAGGGCA ATGC TGCTCTCCCTG TTATTTATTATTGGT YE0449 525650 - 524772 - | hypothetical protein YE0450 526657 - 525662 - | putative protease YE0451 526864 - 527385 + | putative lipid carrier protein TERM 626 527694 - 527741 + G 73 -8.4 -3.85698 | opp_overlap 527684, overlap 527701 527710 AATGAGTTCGGCTAT GCCGCAGTGGTGGTATTAGGCG ATCC CGCCTATTATCAGCGTTTTGGC TTTGTGCCAGCGGCC TERM 627 527701 - 527734 + G 74 -6.7 -4.39571 | overlap 527694 527710 TCGGCTATGCCGCAG TGGTGGTATTAGGCG ATCC CGCCTATTATCAGCG TTTTGGCTTTGTGCC YE0452 527379 - 527882 + | putative acetyltransferase YE0453 528162 - 527869 - | GIY-YIG nuclease superfamily protein TERM 628 527910 - 527926 + g 95 -8 -5.42605 | opp_overlap 527909 ATACCAATGAAGAGG GCTGGT TCATC ACCAGC TTTTCTTTTTGTTGC YE0454 529615 - 528299 - | putrescine transporter TERM 629 529645 - 529669 + r 73 -10 -2.91153 | opp_overlap 529645, overlap 529644 TTTAAATTTCAGAGA CTGCGGGAAT AATTA ACTCCCGCAG GTTTGAGTTATTGGT TERM 630 529669 - 529645 - R 86 -12.2 -2.9348 | opp_overlap 529645 529644 TTTAAATTTCAGAGA CTGCGGGAAT AATTA ACTCCCGCAG GTTTGAGTTATTGGT speF 531874 - 529709 - | ornithine decarboxylase TERM 631 530019 - 530031 + g 71 -2.7 -4.86385 | ACTTTAGGGAAATAT TGTTT GCG GAACA TTTCTTTTTGCAGCT TERM 632 530282 - 530294 + g 73 -7.7 -4.07568 | CAGATCGCATTTTTC TGGCA CGA TGCCA TTTTCACGCAGGAAG TERM 633 531051 - 531069 + g 71 -6.6 -4.15222 | GCTTCGTTGGCACGT TCCGGGGC TAC GCTACGGA TTTGTTCACGCAGGT TERM 634 532663 - 532640 - R 73 -2.6 -5.14563 | opp_overlap 532640 CTTTTGACTAAAAAA TGAATAAA TAGCTAAT TTTATTCA CTTTAAACGTTATAT TERM 635 533009 - 532989 - R 100 -13.3 -3.05562 | overlap 532979 532991 ATAAATGTGGCAACA CAGGGGCAA AAG CTGCCCCTG TGAGGAGGAATTTAA TERM 636 533007 - 532991 - R 74 -10.1 -3.08088 | overlap 532989 AAATGTGGCAACACA GGGGCAA AAG CTGCCCC TGTGAGGAGGAATTT YE0458 535045 - 533021 - | hypothetical protein YE0459 536306 - 535068 - | hypothetical protein TERM 637 536043 - 536074 + g 83 -9.4 -4.42386 | gap 1, opp_overlap 536043, overlap 536045 TGGGAAGCTGTAATA GTCGTGCTTGTCGCC ACT GGCGGCTAGCA-GGC TTTTATCCATGACGG TERM 638 536045 - 536073 + g 76 -10.9 -3.2511 | opp_overlap 536043, overlap 536043 GGAAGCTGTAATAGT CGTGCTTGTCGCC ACT GGCGGCTAGCAGG CTTTTATCCATGACG TERM 639 536367 - 536389 + H 70 -2.8 -5.06451 | opp_overlap 536371, overlap 536350 536371 GGTTAATGTAATTAA TTAATTCATT TTT AATGAATAGA TTTTTTCACCTAATA TERM 640 536457 - 536447 - H 81 -5.4 -5.08601 | opp_overlap 536456 TTACTTCAATAAAAA GAAC ACT GTTC CATTTCAGATGGATT YE0460 536867 - 538180 + | putative sugar binding protein TERM 641 538373 - 538410 + G 78 -10.7 -3.38656 | gap 1, opp_overlap 538386, overlap 538386 CTTTTCCCGCGCGAT GGGTGATGAAGCACTGCA TTC TGCGGT-TTTCAACACCC TGTTATATGTGGTGG TERM 642 538422 - 538444 + G 95 -12 -4.44461 | ACCCTGTTATATGTG GTGGTCACCA TGG TGGTGGCCGC TTTTATCGCCTTCTT TERM 643 538592 - 538605 + G 81 -8.1 -4.51097 | CCCGACCAGTAATGG GGTGG TGAA CCACC TTTTGTCGTGGTTCA YE0461 538188 - 539072 + | sugar transport system, permease protein YE0462 539091 - 539930 + | sugar transport system, permease protein TERM 644 540291 - 540281 - g 83 -6.8 -4.91873 | GATATCAATCAAAAA GTGG GGT CCAC CGCCGAGTTACTGGG YE0463 539942 - 541057 + | putative sugar ABC transporter, ATP-binding protein TERM 645 541098 - 541088 - g 75 -3.2 -5.08601 | TGACGCCAATAAAAA CGTC TGC GACA CCGATGAAACTGTAC TERM 646 541180 - 541194 + G 71 -8.5 -3.67597 | opp_overlap 541180 TTTTCACCATTACAA CCGGC CTTGC GCCGG TTATTAAGTGAAGCA TERM 647 541273 - 541253 - g 77 -6.8 -4.60797 | opp_overlap 541263 GTGTGACACACAAAA CGCTACTG CCCGT CAGTGGCG ACATTCACGATTATT YE0464 541072 - 542238 + | hypothetical protein YE0465 542336 - 542779 + | hypothetical protein TERM 648 542774 - 542786 + F 74 -4.1 -5.05782 | TCTCGTCTTGAGTCT CAGTG ATC TACTG TTTTTTGCCATGCGT TERM 649 543763 - 543737 - g 71 -8.8 -3.73068 | opp_overlap 543736 543739 543754 543762 CTGCCAATCTAACAA TAGCTTCCGG CTCATCC CCAGAAGCTA CCTTTGGTATTCCTA YE0467 543286 - 544275 + | hypothetical protein TERM 650 544389 - 544418 + F 79 -7.9 -4.25681 | opp_overlap 544394, overlap 544394 544414 TCTATAATGAATATT AGAAAGCCTCATG TCAT CATGAGGCTTTGA TTTATTAAATTAAAT TERM 651 544413 - 544394 - f 100 -12.2 -4.08058 | opp_overlap 544389 544394 AATGAATATTAGAAA GCCTCATG TCAT CATGAGGC TTTGATTTATTAAAT TERM 652 544394 - 544413 + F 100 -12.2 -4.21744 | opp_overlap 544394, overlap 544389 AATGAATATTAGAAA GCCTCATG TCAT CATGAGGC TTTGATTTATTAAAT YE0468 544967 - 545596 + | hypothetical protein phnP 546364 - 545597 - | carbon-phosphorus lyase complex accessory protein TERM 653 545624 - 545650 + g 76 -10.8 -3.17146 | overlap 545623 545620 AATTATCTGATTATC CTGCGCGATGGT GAC GCCGTCGGGCAG TGTGTTGTCGAGCGC phnN 546933 - 546355 - | ribose 1,5-bisphosphokinase TERM 654 546758 - 546735 - G 79 -10.4 -3.63744 | gap 1, overlap 546733 GTGCCTGCCAAAACA GCGC-AAACAG CCC CTGTTTGGCGC GCAATAAAAACTCCT phnM 548081 - 546933 - | PhnM protein phnL 548752 - 548078 - | phosphonates transport ATP-binding protein phnK 549614 - 548826 - | phosphonates transport ATP-binding protein phnJ 550495 - 549629 - | PhnJ protein phnI 551600 - 550488 - | PhnI protein TERM 655 550660 - 550677 + g 74 -4.1 -4.98436 | gap 1, overlap 550663 ACAAACTCTTCATCT TG-CGCCG GGC TGGCGACA TTTTTGTCGTATTCC TERM 656 551560 - 551570 + g 71 -4.6 -4.58685 | AGTAATTGATGGGCT GCCG CAA TGGC TTTTTCGCCCCCTTT phnH 552181 - 551600 - | carbon-phosphorus lyase complex subunit phnG 552657 - 552181 - | PhnG protein TERM 657 552499 - 552481 - G 75 -8.1 -4.30987 | gap 1, overlap 552482 552483 ATCGCCCAGAATAAA GCGGCGGC CAGT GCCGCC-C ATTCGCGCCTGTAAT TERM 658 552498 - 552483 - G 75 -11.8 -2.50545 | overlap 552481 552482 CGCCCAGAATAAAGC GGCGGC CAGT GCCGCC CATTCGCGCCTGTAA phnF 553383 - 552658 - | putative transcriptional regulator TERM 659 553503 - 553517 + H 86 -7.8 -4.72986 | AGTAAGTTTTCTCAC CCGCTA TGC TGGCGG TTTTTAATGACAGTA YE0479 553768 - 554871 + | putative lipoprotein TERM 660 555012 - 555038 + F 76 -10.2 -2.98545 | opp_overlap 555010, overlap 555010 GGGTATAACGACACT TGCTCTCCCT TATTCAT GGGGAGAGCA TCGTTATTATAAAAA YE0480 555105 - 556841 + | exported protein nrdG 557360 - 556986 - | anaerobic ribonucleoside-triphosphate reductase activating protein TERM 661 557571 - 557550 - R 95 -13.1 -3.15544 | overlap 557535 GCTCATCGGGATTAA TGAGCCTCA TCCT TGAGGCTCA CCCTGCGGGCTAGCA TERM 662 557598 - 557620 + r 95 -11.4 -3.74526 | opp_overlap 557602 557603, overlap 557602 AGCATAAATGCTGTT CAAATCGGTT CCC GACCGATTTG TTATTCGCTTGCTGC TERM 663 557602 - 557616 + r 74 -6.4 -4.4846 | opp_overlap 557602 557603, overlap 557598 TAAATGCTGTTCAAA TCGGTT CCC GACCGA TTTGTTATTCGCTTG nrdD 559834 - 557696 - | anaerobic ribonucleoside triphosphate reductase TERM 664 559919 - 559898 - R 72 -7.9 -3.81339 | overlap 559899 TATCCACAAGGCAAA CCGCAGCAC ATCA GGGCTGCGA GGGGGTGTGGATGGT TERM 665 559918 - 559899 - R 70 -9.2 -2.88321 | overlap 559898 ATCCACAAGGCAAAC CGCAGCAC ATCA GGGCTGCG AGGGGGTGTGGATGG YE0483 561026 - 560118 - | LysR family transcriptional regulator YE0484 561129 - 561653 + | putative oxidoreductase YE0485 561756 - 562025 + | hypothetical protein YE0486 562119 - 562376 + | hypothetical protein TERM 666 562376 - 562411 + T 100 -9 -4.82819 | gap 1, opp_overlap 562379, overlap 562376 562377 562379 CCTTATGTTTCGATA G-CATTCTGCACCCGGT TGT GCCGGGTACTGAATGGC TTTTGTTGTCCTATA TERM 667 562376 - 562410 + T 76 -9.2 -3.48607 | opp_overlap 562379, overlap 562376 562377 562379 CCTTATGTTTCGATA GCATTCTGCACCCGGT TGT GCCGGGTACTGAATGG CTTTTGTTGTCCTAT TERM 668 562377 - 562409 + T 88 -12.7 -2.68079 | opp_overlap 562379, overlap 562376 562376 562379 CTTATGTTTCGATAG CATTCTGCACCCGGT TGT GCCGGGTACTGAATG GCTTTTGTTGTCCTA TERM 669 562379 - 562407 + T 70 -9.5 -2.87028 | opp_overlap 562379, overlap 562377 562376 562376 TATGTTTCGATAGCA TTCTGCACCCGGT TGT GCCGGGTACTGAA TGGCTTTTGTTGTCC TERM 670 562407 - 562379 - T 76 -11 -2.62396 | opp_overlap 562377 562376 562376 562379 TATGTTTCGATAGCA TTCTGCACCCGG TTGTG CCGGGTACTGAA TGGCTTTTGTTGTCC YE0487 563148 - 562432 - | putative ABC transporter, ATP-binding protein YE0488 564013 - 563135 - | putative ABC transporter transporter,ATP-binding protein YE0489 564839 - 564006 - | putative transporter, permease protein YE0490 565890 - 564841 - | putative transporter, permease protein TERM 671 565019 - 565002 - G 77 -6.3 -4.65895 | gap 1, overlap 565004 CCGGCCAGGCAAAAA CGGT-CTC GGT GAGCACCG CGCCTTCCAACATGC TERM 672 565597 - 565566 - G 80 -9.4 -4.20084 | opp_overlap 565567, overlap 565587 ATGAGGCAGGGAAAA CGGTCAGCAGATCT TGTA ATACCGGCTGACCG CTGGCGCTGGCAACA TERM 673 565845 - 565870 + g 85 -10.4 -4.00042 | opp_overlap 565844 565842 565847, overlap 565847 AGAACCCCCAAAGAC GACGCCGGGA TAGGGT TCCCGGCGTA TTATTTAGTGCGACA TERM 674 565847 - 565868 + g 89 -13 -3.59252 | opp_overlap 565844 565842 565847, overlap 565845 AACCCCCAAAGACGA CGCCGGGA TAGGGT TCCCGGCG TATTATTTAGTGCGA TERM 675 565868 - 565847 - G 81 -13 -2.85069 | opp_overlap 565847 565845, overlap 565844 565842 AACCCCCAAAGACGA CGCCGGGA TAGGGT TCCCGGCG TATTATTTAGTGCGA TERM 676 566055 - 566032 - R 73 -8.2 -3.67597 | gap 1 TCGCGCAGCTAACAA CCCTGCA-ACT TCA AGTACGCAGGG AATAGGCTATTTGCT YE0491 567630 - 566062 - | ABC transporter, substrate binding protein TERM 677 568154 - 568144 - g 76 -8.2 -4.12188 | TGACTATCTGGAAAA CCGC CGC GCGG AATATCACGCTAAAT YE0492 567965 - 568423 + | hypothetical protein argI 569761 - 568754 - | ornithine carbamoyltransferase subunit I YE0495 569932 - 570363 + | hypothetical protein TERM 678 570463 - 570513 + T 81 -11.6 -2.81088 | overlap 570483 TTTACTTGCTGCCTA CCTGCGACGCCAATGGCTTTGGGG ATT CCCCTTTGTCCTTGACGCCGCAGG GTTGTTAGCTACGTT TERM 679 570483 - 570493 + T 77 -8.2 -4.05446 | overlap 570463 GACGCCAATGGCTTT GGGG ATT CCCC TTTGTCCTTGACGCC TERM 680 570707 - 570685 - T 73 -9.1 -3.41988 | overlap 570683 570688 TGCCAGTTAATAATA TCAGGGCGC TTGAT GCGCCCTTA GACTGCTGGCAAAGT TERM 681 570704 - 570688 - T 77 -10.8 -2.86259 | overlap 570685 570683 CAGTTAATAATATCA GGGCGC TTGAT GCGCCC TTAGACTGCTGGCAA TERM 682 570855 - 570831 - T 80 -9.9 -3.61894 | opp_overlap 570819 570832 570833, overlap 570832 AAGTGCTGTCAATAA CCTCAGGGCGC AAT GCGCCCTGACT TATTACAATGTTTTC TERM 683 570854 - 570832 - T 93 -13.4 -2.76815 | opp_overlap 570819 570832 570833, overlap 570831 AGTGCTGTCAATAAC CTCAGGGCGC AAT GCGCCCTGAC TTATTACAATGTTTT TERM 684 570832 - 570854 + T 100 -13.4 -3.69976 | opp_overlap 570832 570831, overlap 570819 570833 AGTGCTGTCAATAAC CTCAGGGCGC AAT GCGCCCTGAC TTATTACAATGTTTT TERM 685 570833 - 570853 + T 100 -16.9 -2.80901 | opp_overlap 570832 570831, overlap 570832 570819 GTGCTGTCAATAACC TCAGGGCGC AAT GCGCCCTGA CTTATTACAATGTTT YE0497 571361 - 570858 - | putative acetyltransferase TERM 686 571590 - 571566 - R 100 -7.2 -5.73339 | gap 1, opp_overlap 571566 ACAATGATAAAAAAA CAGCGG-CTAC CTAA ATAGTCCGCTG TTTCTATTTTGCTGT TERM 687 571566 - 571590 + r 74 -6.5 -4.49352 | gap 1, opp_overlap 571566 ACAATGATAAAAAAA CAGCGG-CTA CCTAAA TAGTCCGCTG TTTCTATTTTGCTGT valS 574518 - 571621 - | valyl-tRNA synthetase TERM 688 573247 - 573267 + g 73 -10.5 -3.12847 | CGAGTAATACATATT TTCGTACTG CTT CGGTACGAA TTGGATCTCGCCGTT TERM 689 574086 - 574122 + g 79 -10.2 -3.75332 | gap 1 CGGAGTTACCCAGAC GGCGCATTTGGCGAGTA ATGG TGC-CGCCAGATTCGCC TTTCCATTGCCAGAT holC 574981 - 574532 - | DNA polymerase III subunit chi carP 576652 - 575141 - | leucyl aminopeptidase TERM 690 575213 - 575192 - G 82 -10.1 -3.8062 | opp_overlap 575191 575190 575192 GAACTGGGATAACAA CGCGACTGG ACGG CCAGTTGCG CCTTTGTTCTTACCT TERM 691 575192 - 575213 + g 78 -12.3 -2.5571 | opp_overlap 575192, overlap 575191 575190 GAACTGGGATAACAA CGCGACTGG ACGG CCAGTTGCG CCTTTGTTCTTACCT YE0501 576932 - 578026 + | hypothetical protein TERM 692 578923 - 578960 + G 79 -3.3 -5.19275 | CCATTACGCAGTGTA CCAATGGGGGTTCGGGT AGTT ACCGGTATCTTCTTTGG TTTTGTTTTCTACGT YE0502 578026 - 579096 + | hypothetical protein TERM 693 579299 - 579314 + T 100 -6.8 -6.38039 | opp_overlap 579299 TAGTATGAAAATCAA GTCACC GCAA GGTGGC TTTTTTTTTTGCCTA TERM 694 579569 - 579617 + T 77 -10.5 -3.11812 | overlap 579564 579584 TGTAGCATCGGGGAG TTATCTCTTTACAAAGGACATTT TTG GGGTGTCCTTGGTGCAGAGATAA TTCGGTACTATCGCT TERM 695 580009 - 579984 - T 70 -7.5 -3.89215 | CGTGATAAAGCGAAA GCGCTGATCGC GCAA GGGATCAGCCC GGCAAATAAACGTGA TERM 696 581150 - 581128 - T 100 -16.4 -3.68761 | ATGGGAAAAGTACAA CGCAGCATCT TAT AGATGCTGCG ACAGGTAACCACTAG YE0506 581530 - 581162 - | hypothetical protein TERM 697 581315 - 581325 + g 100 -6.8 -6.23317 | AGGATCTGCCTTTGT TGGG CGT CCCA TTTTTTTCTTTTTCT YE0507 582024 - 582149 + | hypothetical protein YE0508 582331 - 582203 - | hypothetical protein TERM 698 582615 - 582646 + H 76 -11.1 -2.71263 | opp_overlap 582617, overlap 582603 582617 TCATCTATTGCACTA CATTTGTAATGCG CTATAC TGCATTACAAATG TCATTACAGGAGATT relB 582668 - 582922 + | bifunctional antitoxin/transcriptional repressor RelB YE0510A 582912 - 583202 + | hypothetical protein YE0512 583769 - 584098 + | hypothetical protein TERM 699 584151 - 584195 + F 71 -10.1 -2.6063 | gap 2, opp_overlap 584150, overlap 584147 TGGAAGAGAGATGAG CGGCTCC-CCC-TATGGCAAG TGACT CTTGCTCTGCGGGTGGAGCCG TAAATTATGGATAGA TERM 700 584269 - 584297 + F 100 -8.3 -5.09895 | opp_overlap 584269 584271, overlap 584271 CCAGAGCTGGAAGAA CACTAATACCATT TCA AATGGTATTGGTA TTTTTTAGCTCCGTC TERM 701 584297 - 584269 - f 73 -8.3 -3.64487 | opp_overlap 584269 584271, overlap 584271 CCAGAGCTGGAAGAA CACTAATACCATT TCA AATGGTATTGGTA TTTTTTAGCTCCGTC TERM 702 584295 - 584271 - f 71 -8.7 -3.40052 | opp_overlap 584269 584271, overlap 584269 AGAGCTGGAAGAACA CTAATACCATT TCA AATGGTATTGG TATTTTTTAGCTCCG TERM 703 584271 - 584295 + F 93 -10.9 -4.17608 | opp_overlap 584271 584269, overlap 584269 AGAGCTGGAAGAACA CTAATACCATT TCA AATGGTATTGG TATTTTTTAGCTCCG YE0513 584459 - 584869 + | putative acetyltransferase YE0514 584895 - 585584 + | putative transcriptional regulator YE0515 585621 - 586928 + | putative permease TERM 704 586946 - 586978 + F 77 -10.6 -3.2327 | opp_overlap 586946 586950 586952, overlap 586950 TTTTTGCGAACAATA TAAACACTCCCCCG AAGTG TGGGGGGGGGTTTA TTGATAATCAATTAA TERM 705 586964 - 586950 - f 72 -6.4 -4.34263 | opp_overlap 586946 586950, overlap 586946 586952 TGCGAACAATATAAA CACTCC CCC GAAGTG TGGGGGGGGGTTTAT TERM 706 586950 - 586974 + F 74 -7 -4.2704 | opp_overlap 586950 586946 586952, overlap 586946 TGCGAACAATATAAA CACTCCCCCG AAGTG TGGGGGGGGG TTTATTGATAATCAA YE0516 587027 - 587191 + | hypothetical protein YE0517 587755 - 587567 - | hypothetical protein YE0518 587957 - 589264 + | putative permease TERM 707 589286 - 589304 + F 81 -11 -3.36175 | opp_overlap 589277 589286 589288, overlap 589288 589296 589297 TATTAATATTATAAA TACTCCCC CTG GGGGAGTG TTATCAATCCCCATT TERM 708 589304 - 589286 - f 80 -8.8 -4.07455 | opp_overlap 589286 589288 589296 589297, overlap 589277 589288 TATTAATATTATAAA TACTCCCC CTG GGGGAGTG TTATCAATCCCCATT TERM 709 589288 - 589302 + F 86 -11.4 -3.24924 | opp_overlap 589286 589288, overlap 589286 589296 589297 TTAATATTATAAATA CTCCCC CTG GGGGAG TGTTATCAATCCCCA TERM 710 589302 - 589288 - f 90 -11.4 -3.62291 | opp_overlap 589288 589286 589296 589297, overlap 589286 TTAATATTATAAATA CTCCCC CTG GGGGAG TGTTATCAATCCCCA YE0519 589409 - 590173 + | hypothetical protein YE0520 590498 - 590196 - | hypothetical protein YE0521 591214 - 590732 - | hypothetical protein YE0522 591899 - 591339 - | hypothetical protein YE0523 592294 - 592004 - | autoinducer-2 (AI-2) modifying protein LsrG TERM 711 592104 - 592117 + g 70 -9.5 -3.15544 | GGTGTTTTCTTATGC GCCGC GACT GCGGC TTCATCAACATAGGC YE0524 593231 - 592356 - | aldolase TERM 712 592530 - 592544 + g 74 -4.2 -5.00616 | overlap 592531 ACACATTTCCAGCGC ATCCCT TTC AGGGAG TTTTTTACCGCCAGC YE0525 594321 - 593287 - | putative periplasmic solute-binding protein TERM 713 593437 - 593454 + g 74 -2.6 -5.07107 | overlap 593439 GATATCAATTTTATC GCCGAC ATTCAG GTCGCC TTTTTTCAGCATTTC TERM 714 593843 - 593853 + g 77 -6.8 -4.64992 | opp_overlap 593843 593842 CTGGAATAGAAGAAC GCCA CTT TGGC TTTGTCTTTTTTCAC YE0526 595373 - 594378 - | putative ABC transporter permease protein YE0527 596359 - 595370 - | putative ABC transporter permease protein TERM 715 596390 - 596378 - R 80 -9.1 -3.94634 | GAGCAGGGCAAATAA GGCGA GGA TCGCC AGCAGAGCGGTGCCT YE0528 598029 - 596446 - | putative ABC transporter ATP-binding protein TERM 716 597464 - 597476 + g 77 -2.7 -5.30616 | ACCACCCCAACCCCT TGTTG TAA TAACA TTTTTATTTGGCTGA TERM 717 598066 - 598054 - H 77 -3.5 -5.1963 | CGTAATGAACAAAAA TAATT CAA AATTA AAAGTGTTCAAAAAA TERM 718 598151 - 598141 - H 86 -2.6 -5.7946 | CTGTGAATAAAAAAA TTTA AAT TAAA ATATGTTCAAATATG YE0529 598407 - 599384 + | putative transcriptional regulatory protein TERM 719 600367 - 600384 + G 74 -9.1 -3.67597 | opp_overlap 600366 CATGTCACAGCAGAG GCCGCAC AAGA GTGTGGC TTGTTGGCTGGAACG YE0530 599707 - 601257 + | autoinducer-2 (AI-2) kinase YE0531 601930 - 602877 + | putative lipopolysaccharide core biosynthesis protein YE0532 602964 - 604187 + | putative O-antigen biosynthesis protein TERM 720 604249 - 604230 - f 95 -12.8 -3.21466 | opp_overlap 604230, overlap 604225 AACTGATTAAGTCAA CGGCCCCC CAAC GGAGGCCG TTTTTCTTAGTGCTA TERM 721 604230 - 604249 + F 100 -10.6 -5.15167 | opp_overlap 604225 604230 AACTGATTAAGTCAA CGGCCCCC CAAC GGAGGCCG TTTTTCTTAGTGCTA arcD 605641 - 607149 + | arginine/ornithine antiporter arcA 607165 - 608448 + | arginine deiminase TERM 722 608546 - 608597 + F 70 -7.8 -3.67597 | overlap 608547 GTTTGCTGGCTGCCT ACCTGTGGCTCCAATGACTTTGGG AACC CCCGTCGGCCTTGAAGCCACAGGG TTGTTAGCTGCCGCC TERM 723 608547 - 608596 + F 81 -11.3 -2.80344 | overlap 608546 TTTGCTGGCTGCCTA CCTGTGGCTCCAATGACTTTGGG AACC CCCGTCGGCCTTGAAGCCACAGG GTTGTTAGCTGCCGC YE0536 608930 - 610012 + | putative lipoprotein TERM 724 611822 - 611832 + G 76 -8.2 -3.99806 | CGACAATCGGTCAGG GCGC GAT GCGC TTTATGCTGACTTAT TERM 725 612336 - 612360 + G 70 -7.8 -3.87994 | ACTCAATGATGTGAT GGTCTGGAGT CAGGC ACGCCAGGCC TTTATCCCGATCGAT YE0537 610012 - 613098 + | putative multi-drug efflux protein TERM 726 613180 - 613163 - f 84 -11.3 -3.09635 | opp_overlap 613161 ATGCCGATCAGTTAA GGATCGG TTGA CCGATCC AGTGGTTGTGTAAGA TERM 727 613197 - 613221 + F 100 -10.8 -5.61596 | opp_overlap 613197 GTGGTTGTGTAAGAA TCCGGAAATG TTCTT CGTTTCCGGA TTTTTTTATGCACAT TERM 728 613221 - 613197 - f 73 -8.6 -3.61398 | opp_overlap 613197 GTGGTTGTGTAAGAA TCCGGAAATG TTCTT CGTTTCCGGA TTTTTTTATGCACAT TERM 729 614040 - 613998 - g 75 -7.7 -4.19238 | gap 1, overlap 613999 614021 TGGTGAAGTTGAAAA CCAGCCCACAGGCCCGGA AAAAGTGG CCCGAGC-TGGGGGCTGA AATGACAGCCCGCCT YE0538 613229 - 614563 + | transposase for insertion sequence element IS1660 TERM 730 614542 - 614569 + F 100 -17.2 -3.25169 | opp_overlap 614542, overlap 614534 AGCCAGGAACAAAAA TGCCAGTCAGTT GCTT AACTGACTGGCA TTACTCCATTCTTGG TERM 731 614569 - 614542 - f 100 -17.2 -5.14163 | opp_overlap 614542 614534 AGCCAGGAACAAAAA TGCCAGTCAGTT GCTT AACTGACTGGCA TTACTCCATTCTTGG gldA 614850 - 615944 + | glycerol dehydrogenase dhaK 615982 - 617106 + | dihydroxyacetone kinase subunit DhaK YE0541 617124 - 617756 + | hypothetical protein TERM 732 618012 - 618035 + G 77 -10.4 -3.61398 | gap 1 TTAGGCAGCGCATTA CT-CAGTGCTG AAA CAGCACTGGAG TTATTAGACCCAGAG YE0542 617790 - 619223 + | dihydroxyacetone kinase subunit M YE0543 620474 - 619269 - | putative glycosyltransferase YE0544 622363 - 620654 - | putative transferase YE0545 623896 - 622394 - | putative oxidoreductase YE0546 625358 - 623925 - | hypothetical protein TERM 733 624384 - 624371 - G 77 -3.9 -5.1356 | CCTCATCAAGAAAAA TGATA TCCT TATCA AGATGTAATGCATTA YE0547 626550 - 625375 - | putative membrane transport protein TERM 734 625446 - 625428 - G 73 -3.2 -4.84539 | TAATTAAATAGAAAA TTAATATG CAA CAAATTAA TATGGCAATAAAAGC YE0548 627443 - 626577 - | hypothetical protein TERM 735 628495 - 628485 - g 80 -8.2 -4.34402 | opp_overlap 628484, overlap 628486 628487 CGCTTTATAGCAAAA CCGG CAG CCGG AGTTATTTCTCCGAC YE0549 627938 - 629023 + | putative pectinesterase dhaR 630945 - 629026 - | DNA-binding transcriptional regulator DhaR scrR 631966 - 630932 - | sucrose operon repressor TERM 736 631920 - 631896 - G 74 -10.8 -2.83164 | gap 1, opp_overlap 631884 631892 CCATTGAGCACCAGA CTGGTG-GTCG ATTT CGACACACCAG CCAGTTTGGCAATAT scrB 633422 - 632013 - | sucrose-6-phosphate hydrolase scrA 634792 - 633422 - | PTSsystem, sucrose-specific IIBC component TERM 737 634506 - 634522 + g 74 -9.3 -3.62849 | overlap 634500 GGATTTAGCTTACGG GCAGCCG CAT CGGCCGC TTCTGATTTAGTGGA TERM 738 634709 - 634733 + g 72 -10.8 -2.69057 | gap 1, opp_overlap 634705 634701, overlap 634708 634730 TACTAAACGCAGGCG TGTC-GCGCAG TGCG CTGCGCTGACA ATATTGTCTTTACCG scrY 636398 - 634860 - | sucrose porin TERM 739 636681 - 636657 - R 83 -9.3 -3.94333 | opp_overlap 636678, overlap 636658 GAGCAAGAGAGGAAA CCGGATGCC AACGCAG GGCATCCGA CAGGCGGGGCCGCGG TERM 740 636680 - 636658 - R 76 -10.6 -2.95877 | opp_overlap 636678, overlap 636657 AGCAAGAGAGGAAAC CGGATGCC AACGCAG GGCATCCG ACAGGCGGGGCCGCG scrK 637632 - 636697 - | aminoimidazole riboside kinase TERM 741 636888 - 636908 + g 74 -11.1 -3.09004 | overlap 636881 636879 636885 CAAATGCATCTCCGG CCCCGGTGG TGT CTATCGGGG TGATTTTCCGGCTGG YE0555 637836 - 638981 + | putative iron transporter YE0556 639479 - 641635 + | putative iron transporter TERM 742 641646 - 641688 + T 82 -7 -4.7497 | opp_overlap 641651 641654, overlap 641647 641649 641654 TCTAAATTAGCCGTT TAAGATAAGCCCGGTAAGTG AGT CATTTGCCGGGCTTAGGTAG TTTTTGCTCACTCCG TERM 743 641647 - 641687 + T 71 -8.3 -3.445 | opp_overlap 641651 641654, overlap 641646 641649 641654 CTAAATTAGCCGTTT AAGATAAGCCCGGTAAGTG AGT CATTTGCCGGGCTTAGGTA GTTTTTGCTCACTCC TERM 744 641649 - 641685 + T 81 -10.9 -3.28873 | opp_overlap 641651 641654, overlap 641647 641646 641654 AAATTAGCCGTTTAA GATAAGCCCGGTAAGTG AGT CATTTGCCGGGCTTAGG TAGTTTTTGCTCACT TERM 745 641683 - 641651 - T 100 -13.5 -3.0263 | opp_overlap 641649 641647 641646 641654, overlap 641654 ATTAGCCGTTTAAGA TAAGCCCGGTAAGTG AGT CATTTGCCGGGCTTA GGTAGTTTTTGCTCA TERM 746 641654 - 641680 + T 100 -15.2 -3.21225 | opp_overlap 641651 641654, overlap 641649 641647 641646 AGCCGTTTAAGATAA GCCCGGTAAGTG AGT CATTTGCCGGGC TTAGGTAGTTTTTGC TERM 747 641680 - 641654 - T 84 -10.8 -3.65991 | opp_overlap 641654 641649 641647 641646, overlap 641651 AGCCGTTTAAGATAA GCCCGGTAAGTG AGT CATTTGCCGGGC TTAGGTAGTTTTTGC TERM 748 642011 - 642058 + T 74 -9.5 -3.3972 | opp_overlap 642001 642006 642018, overlap 642014 642018 AAATGTAATACCGCA GTATTAAGCTCAACCATTTAT GAGAGA ATAAATGATTGAGCTTAATGG TTAGTCATTTTATCA TERM 749 642014 - 642055 + T 93 -13.4 -2.84344 | opp_overlap 642001 642006 642018, overlap 642011 642018 TGTAATACCGCAGTA TTAAGCTCAACCATTTAT GAGAGA ATAAATGATTGAGCTTAA TGGTTAGTCATTTTA TERM 750 642051 - 642018 - T 86 -12 -3.21925 | opp_overlap 642014 642011 642018, overlap 642006 ATACCGCAGTATTAA GCTCAACCATTTAT GAGAGA ATAAATGATTGAGC TTAATGGTTAGTCAT TERM 751 642018 - 642051 + T 76 -9.8 -3.29364 | opp_overlap 642018 642006, overlap 642014 642011 ATACCGCAGTATTAA GCTCAACCATTTAT GAGAGA ATAAATGATTGAGC TTAATGGTTAGTCAT hmsT 643171 - 642071 - | HmsT protein YE0558 643558 - 643782 + | hypothetical protein YE0559 645335 - 644247 - | LysR family regulatory protein TERM 752 644868 - 644835 - Gf 73 -8.8 -3.48924 | GTAGCGCTGATAGAA GTCACGCAAGGCGG GGATGA CCACATTGCGTGCC AGTGAATGTGGCATA YE0560 645290 - 646282 + | putative oxidoreductase rsmC 647344 - 646301 - | 16S ribosomal RNA m2G1207 methyltransferase TERM 753 646913 - 646944 + g 80 -7.2 -4.4959 | opp_overlap 646921, overlap 646914 TTTATCCAGGCGACC GTGATAGAGGCCGC AACG GCGGGCGCTATCAA TTTTGGTTAATTGCG TERM 754 646914 - 646943 + g 78 -10.7 -3.29031 | opp_overlap 646921, overlap 646913 TTATCCAGGCGACCG TGATAGAGGCCGC AACG GCGGGCGCTATCA ATTTTGGTTAATTGC TERM 755 647118 - 647104 - G 73 -7 -4.24342 | TTGGCCAGTAATAAA CCAGCG TAT CGCAGG CGGCGACGGTTTCAG TERM 756 647238 - 647252 + g 70 -10 -3.24924 | opp_overlap 647238 647237, overlap 647236 CCGGCTGCATCAAAT TGCGCT GGC AGCGCA TCTTGTAAATCACCG b4372 647457 - 647894 + | DNA polymerase III subunit psi rimI 647839 - 648282 + | ribosomal-protein-alanine N-acetyltransferase prfC 648533 - 650122 + | peptide chain release factor 3 TERM 757 650141 - 650169 + F 70 -8.1 -3.73345 | overlap 650145 AGCCGCAAGCCGCAT TCTATCGGGGCAC TCA GTGCTCCGATTCA TTAATTTTCCTCATT TERM 758 650145 - 650165 + F 100 -13.3 -3.54779 | overlap 650141 GCAAGCCGCATTCTA TCGGGGCAC TCA GTGCTCCGA TTCATTAATTTTCCT b4376 650433 - 651047 + | periplasmic protein TERM 759 651064 - 651103 + F 72 -8 -3.78736 | TATTATACGGCTGAT GGGTATTTCGTGGG GCCACAATATAA CCTGCGAAATACCC TTTAATAAGTCTGTC TERM 760 651736 - 651768 + G 93 -13.4 -3.67068 | overlap 651728 CGGGGAATTTTTACA GCCGGTGTGCTGGA TGAAT TCCAGCGCGCCCGC TTTAACCCTTTTGAT TERM 761 651979 - 651967 - g 70 -7.7 -3.81 | ATCACCTCACAACAA TTGCC ATT GGCAA TGGATCAAGCCGAAC TERM 762 652094 - 652082 - g 71 -4.7 -4.49556 | CTCCGACGAAAGAAA GCTGG TTA CCGGC GATTAAGGCTTCCAG YE0567 651616 - 652869 + | hypothetical protein TERM 763 652884 - 652895 + F 70 -7.2 -3.82117 | ATGGCAGTGATTAGC GGGC AAAT GCCC TATTTTATCGATACA YE0568 652890 - 653687 + | putative metalloenzyme YE0569 653889 - 655160 + | putative Na+ dependent nucleoside transporter-family protein deoC 655540 - 656337 + | deoxyribose-phosphate aldolase TERM 764 656365 - 656398 + F 82 -5.8 -4.93877 | opp_overlap 656362 656367, overlap 656368 TCATTGAACTGAGCA GATGCACTGCGGGC TATTTT GTCCGCTGTGCTGC TTTTATTTCATAAGC TERM 765 656368 - 656395 + F 78 -10.5 -3.34291 | opp_overlap 656362 656367, overlap 656365 TTGAACTGAGCAGAT GCACTGCGGGC TATTTT GTCCGCTGTGC TGCTTTTATTTCATA deoA 656425 - 657747 + | thymidine phosphorylase TERM 766 658691 - 658674 - g 79 -3.3 -5.27399 | opp_overlap 658676 658678, overlap 658676 GAAGAGATGAAAAAA GCCGGTG ACAA CACCATC GTTTTCACTAACTTT b4383 657801 - 659024 + | phosphopentomutase deoD 659248 - 659973 + | purine nucleoside phosphorylase YE0575 660151 - 661494 + | hypothetical protein smp 662198 - 661521 - | hypothetical protein TERM 767 663351 - 663337 - g 80 -7.1 -4.55798 | opp_overlap 663349 TATGCTAAAGCAAAA GTGGC TATCC GCCAC GGCGATTTGCTGAGT serB 662434 - 663414 + | phosphoserine phosphatase TERM 768 663857 - 663872 + G 74 -9 -3.6715 | opp_overlap 663852 CACTGCAACAGGTCG CGATGC GCGC GCATCG TTTGGGATTACCTAC TERM 769 664231 - 664221 - g 70 -2.4 -4.87665 | GCGTAGTCACAAAAA CCGC TTT GGGG CTGTCAATGAGTTGG b4389 663442 - 664827 + | DNA repair protein RadA TERM 770 664852 - 664865 + F 71 -4.5 -4.74052 | TAGTCGTGTTCATCG CGCAG CATA CTGTG TTATTTTTGTTTAGT TERM 771 664959 - 664943 - g 78 -5.1 -4.90266 | overlap 664944 GCGATTAAGCAAAAA GGCTGTA CCT TACAGCA AGTGGCAGATGCCAG b4390 664901 - 666184 + | nicotinamide-nucleotide adenylyltransferase YE0581 667182 - 666181 - | putative oxidoreductase TERM 772 667946 - 667962 + G 73 -2.2 -5.08824 | opp_overlap 667959, overlap 667948 GGCAAGCCCTGATTT TACGTC ATGAA GACGAA TTTTTTCGCTGGCAG YE0582 667345 - 668256 + | LysR family transcriptional regulator TERM 773 668283 - 668253 - f 71 -9.8 -2.67021 | opp_overlap 668274, overlap 668252 GCTGGAAATACCAAG GTGAGCCGAATATA CTG TTTATTTGGCTCAC AAAATGAGCCGAATT TERM 774 668274 - 668296 + F 73 -8.5 -3.67976 | opp_overlap 668253 668252 CGAATATACTGTTTA TTTGGCTCA CAAAA TGAGCCGAA TTTGAGGTTAATAGG YE0583 668337 - 669467 + | hypothetical protein TERM 775 669470 - 669489 + T 72 -9.2 -3.15544 | opp_overlap 669471 GTACCCGGATTAAAA AGGCCTGC AATC GCAGGCCC TTAGTCGAGATAAAG TERM 776 669488 - 669471 - T 100 -12.7 -4.72986 | opp_overlap 669470 TACCCGGATTAAAAA GGCCTGC AATC GCAGGCC CTTAGTCGAGATAAA YE0584 671173 - 669527 - | putative ABC transporter ATP-binding protein YE0585 672344 - 671835 - | putative lipoprotein YE0586 673578 - 672355 - | hypothetical protein TERM 777 673604 - 673620 + r 72 -6.5 -4.31379 | opp_overlap 673603, overlap 673606 ATTCTGCCCAGAACT CGGCCAA GCG TTGGCAG TTTTGGTAGATTAGT TERM 778 673643 - 673663 + r 76 -2.5 -5.252 | overlap 673647 AGATTAGTTTGATTC TTTATCTGC TCA GCAGATTTA TTTTTTATAGAACTC TERM 779 673647 - 673659 + r 95 -7.7 -5.13354 | overlap 673643 TAGTTTGATTCTTTA TCTGC TCA GCAGA TTTATTTTTTATAGA YE0587 674309 - 673677 - | hypothetical protein TERM 780 673820 - 673803 - G 71 -4.1 -4.6955 | opp_overlap 673804, overlap 673804 CAGTAACAGACAAAA CGCACTG CCCA CAGTACA TTCGTCATAATCTTC TERM 781 674484 - 674467 - R 100 -10.5 -5.64274 | TGATGGATAAAAAAA CCCGGCA GAGT CGCCGGG CTTGAAGGGGGACTG YE0588 677158 - 674513 - | putative cation-transporting P-type ATPase TERM 782 676839 - 676873 + g 80 -6.6 -4.7339 | overlap 676836 CGAATGACTACCGCT TTACTGGAGAGCAT GTTTTGG ATGCTTTTCAGTGA TTTTTCAGCTTTATT TERM 783 679162 - 679145 - g 83 -9.9 -4.17048 | GCCTGGCCAAAAGAA TTCCGTC AGGC GACGGAA GGCAAGGGGATAACG slt 677714 - 679633 + | lytic murein transglycosylase trpR 679880 - 680212 + | Trp operon repressor YE0591 680748 - 680221 - | NTPase gpmB 680805 - 681452 + | phosphoglycerate mutase rob 682315 - 681449 - | putative right origin-binding protein creA 682540 - 683010 + | hypothetical protein TERM 784 683065 - 683046 - T 100 -12.2 -5.45652 | opp_overlap 683046 AGTGTGAATAAAAAA GCCAGCAT TTGA ATGCTGGC TTTTTCGTAGACGAG TERM 785 683046 - 683065 + T 100 -12.2 -4.72272 | opp_overlap 683046 AGTGTGAATAAAAAA GCCAGCAT TTGA ATGCTGGC TTTTTCGTAGACGAG arcA 683805 - 683089 - | two-component response regulator YE0596 683908 - 684048 + | hypothetical protein TERM 786 684485 - 684446 - T 85 -9.4 -4.17523 | opp_overlap 684452, overlap 684448 684452 AAACAACCTCTAAAA GACTAATGCCAGTCAGTT AAGC AACTGACTGGCATTTTTG TTCCTGGCTTTTCCA TERM 787 684483 - 684448 - T 93 -12 -3.67402 | opp_overlap 684452, overlap 684446 684452 ACAACCTCTAAAAGA CTAATGCCAGTCAGTT AAGC AACTGACTGGCATTTT TGTTCCTGGCTTTTC TERM 788 684479 - 684452 - T 100 -17.2 -3.53779 | opp_overlap 684452, overlap 684448 684446 CCTCTAAAAGACTAA TGCCAGTCAGTT AAGC AACTGACTGGCA TTTTTGTTCCTGGCT TERM 789 684452 - 684479 + T 100 -17.2 -5.14163 | opp_overlap 684452 684448 684446 CCTCTAAAAGACTAA TGCCAGTCAGTT AAGC AACTGACTGGCA TTTTTGTTCCTGGCT YE0598 685244 - 684458 - | transposase for insertion sequence element IS1665 TERM 790 685276 - 685252 - R 91 -5 -5.61596 | opp_overlap 685252 ATGTGCATAAAAAAA TCCGGAAACG AAGAA CATTTCTGGA TTCTTACACAACCAC TERM 791 685293 - 685310 + r 84 -11.3 -3.09635 | opp_overlap 685291, overlap 685303 685304 TCTTACACAACCACT GGATCGG TCAA CCGATCC TTAACTGATCGGCAT YE0599 686637 - 685300 - | transposase for insertion sequence element IS1660 TERM 792 685826 - 685868 + g 75 -7.7 -4.19238 | gap 1, overlap 685803 685827 AGGCGGGCTGTCATT TCAGCCCCCA-GCTCGGG CCACTTTT TCCGGGCCTGTGGGCTGG TTTTCAACTTCACCA TERM 793 686669 - 686645 - H 100 -10.8 -5.61596 | opp_overlap 686645 ATGTGCATAAAAAAA TCCGGAAACG AAGAA CATTTCCGGA TTCTTACACAACCAC TERM 794 686645 - 686669 + H 73 -8.6 -3.61398 | opp_overlap 686645 ATGTGCATAAAAAAA TCCGGAAACG AAGAA CATTTCCGGA TTCTTACACAACCAC TERM 795 686686 - 686703 + H 84 -11.3 -3.09635 | opp_overlap 686684 TCTTACACAACCACT GGATCGG TCAA CCGATCC TTAACTGATCGGCAT TERM 796 687160 - 687182 + H 100 -12 -6.11644 | opp_overlap 687160 AAACAACAGAAAAAA GCCCGCAC CTAAACA GTGCGGGC TTTTTTTTTCAATCA TERM 797 687182 - 687160 - H 100 -12.7 -5.57729 | opp_overlap 687160 AAACAACAGAAAAAA GCCCGCACC TAAAC AGTGCGGGC TTTTTTTTTCAATCA thrA 687253 - 689712 + | bifunctional aspartokinase I/homeserine dehydrogenase I thrB 689715 - 690644 + | homoserine kinase thrC 690648 - 691937 + | threonine synthase YE0603 692860 - 692084 - | hypothetical protein TERM 798 693067 - 693055 - H 79 -7.7 -4.28049 | TTTAAAAGGCGAAAA CGGTT GCG AACCG AATACTGCCTGTTTG TERM 799 693933 - 693916 - g 80 -4.1 -5.32882 | opp_overlap 693916 693915 693918 CAGTATTACAAAAAA CACGGTT ATAA AACTGTG GTTATGGGCGCAAGC talB 693271 - 694224 + | transaldolase B TERM 800 694267 - 694282 + F 87 -4.6 -5.49234 | AGTTATTTGACGAAA GGTGGC GCAA GCTGCC TTTTTTATTGCCTGT TERM 801 694815 - 694805 - g 77 -6.8 -4.5123 | AATCGATCAAAGAAA CCCT GGA AGGG GTGAAAGATGCAGAA mogA 694381 - 694968 + | molybdenum cofactor biosynthesis protein TERM 802 695420 - 695430 + G 71 -4 -4.71828 | CCGTAAGAAGATGTT TACT CTA AGTA TTTTGTTAATGGCAT TERM 803 696112 - 696122 + G 74 -6.8 -4.37092 | overlap 696098 TGATGTTGGCGGTGT CGAC ATG GTCG TTTTATCACACCAAT TERM 804 696277 - 696288 + G 78 -5.8 -4.77157 | opp_overlap 696276 CTTTCTCCTACAATG TGGC ATAT GCCA TTTTTGGTGGGTTGA YE0606 695097 - 696464 + | putative transport protein TERM 805 696494 - 696514 + T 86 -6.9 -5.02502 | opp_overlap 696494 GATATCATTACAAAA TAGCCCA TAAAACC TGGGCTA TTTTTGTCTAATATA TERM 806 696514 - 696494 - T 76 -6.9 -4.49981 | opp_overlap 696494 GATATCATTACAAAA TAGCCCA TAAAACC TGGGCTA TTTTTGTCTAATATA YE0607 698982 - 696532 - | hypothetical protein TERM 807 696938 - 696958 + g 70 -9.7 -3.17051 | overlap 696937 TCCGCACTGGCACCT TGAGCGGGG TAG CCTTGCTCA TATTGCTGCTCCCAG TERM 808 699188 - 699161 - R 100 -12.8 -5.61913 | AATAAACATAAAAAA GCCCCCTGAACA TGAA TATTCAGAGGGC CGTTAAATGTAATTT yaaH 699814 - 699221 - | hypothetical protein TERM 809 701891 - 701874 - g 73 -4.9 -4.75289 | gap 1 CAGCAGAAGATAAAA CTGCTATC GAA GAT-GCAG TGAAAGCACTCGAAG dnaK 700187 - 702094 + | molecular chaperone DnaK TERM 810 702180 - 702143 - f 100 -15.5 -3.53224 | opp_overlap 702141, overlap 702146 TACTGTTGCTGGAAA CCAGCACGGGCGTCGAG GAAA CTCTACGCCCGTGCACG CATGTTAAGGGTAGG TERM 811 702177 - 702146 - f 100 -20.2 -2.90496 | opp_overlap 702141, overlap 702143 TGTTGCTGGAAACCA GCACGGGCGTCGAG GAAA CTCTACGCCCGTGC ACGCATGTTAAGGGT dnaJ 702206 - 703336 + | chaperone protein DnaJ TERM 812 703400 - 703369 - f 95 -4.5 -5.84011 | opp_overlap 703375 AATAAAAAAGAAAAA TAAAAATCCTCGA TGAAGT TCGGGGATTTTTT TCATCTGAGTCCTAT TERM 813 703375 - 703394 + F 95 -5.7 -5.58454 | opp_overlap 703369 AAAGAAAAATAAAAA TCCTCGA TGAAGT TCGGGGA TTTTTTTCATCTGAG ant 703567 - 704745 + | sodium-proton antiporter TERM 814 704794 - 704750 - f 72 -9.3 -3.19389 | opp_overlap 704746 704758, overlap 704752 TAACGCATTGATCAA TATTTGAATGCCAGTGCCTTT ACG AATGGCACTGGCATTCTACCT GATAGATTTCCAGGC TERM 815 704792 - 704752 - f 100 -14.1 -3.15699 | opp_overlap 704746 704758, overlap 704750 ACGCATTGATCAATA TTTGAATGCCAGTGCCTTT ACG AATGGCACTGGCATTCTAC CTGATAGATTTCCAG TERM 816 704758 - 704786 + F 100 -16.1 -3.37975 | opp_overlap 704752 704750, overlap 704746 TGATCAATATTTGAA TGCCAGTGCCTTT ACG AATGGCACTGGCA TTCTACCTGATAGAT nhaR 704895 - 705794 + | transcriptional activator NhaR TERM 817 705916 - 705887 - T 100 -14.5 -2.9348 | opp_overlap 705893 705895, overlap 705878 705895 GCCAAATTTTAGATA TAAAAAAACCGGC CTAG GCCGGTCTTTTTA CGAAGCAGCCAACGT TERM 818 705893 - 705910 + T 76 -6.9 -4.56597 | opp_overlap 705887 705895, overlap 705895 TTTTAGATATAAAAA AACCGGC CTAG GCCGGTC TTTTTACGAAGCAGC TERM 819 705895 - 705908 + T 81 -9.5 -3.90048 | opp_overlap 705887 705895, overlap 705893 TTAGATATAAAAAAA CCGGC CTAG GCCGG TCTTTTTACGAAGCA TERM 820 705908 - 705895 - T 100 -9.5 -5.76633 | opp_overlap 705895 705893, overlap 705887 TTAGATATAAAAAAA CCGGC CTAG GCCGG TCTTTTTACGAAGCA TERM 821 705925 - 705954 + T 80 -10.1 -3.60098 | opp_overlap 705929 705934, overlap 705926 CTTTTTACGAAGCAG CCAACGTAATGCA TTAC TGCATTGCGTTGA TTTGCGCTACCAAGT TERM 822 705926 - 705953 + T 93 -13.6 -2.75844 | opp_overlap 705929 705934, overlap 705925 TTTTTACGAAGCAGC CAACGTAATGCA TTAC TGCATTGCGTTG ATTTGCGCTACCAAG rpsT 706201 - 705938 - | 30S ribosomal protein S20 b0025 706615 - 707553 + | bifunctional riboflavin kinase/FMN adenylyltransferase ileS 707585 - 710401 + | isoleucyl-tRNA synthetase TERM 823 710484 - 710499 + G 74 -9 -3.65425 | opp_overlap 710482 710484 TCTCAGTAGCAAACA GTGGGT TATG ACCCAC TTTGCGCTGTATGAG TERM 824 710499 - 710484 - g 71 -9 -3.48024 | opp_overlap 710484, overlap 710482 TCTCAGTAGCAAACA GTGGGT TATG ACCCAC TTTGCGCTGTATGAG TERM 825 710511 - 710531 + G 73 -2.5 -5.03314 | overlap 710512 710515 CCACTTTGCGCTGTA TGAGTCGGT GCC ACTGATTCC TTTTTTCAACCTGAC lspA 710401 - 710910 + | lipoprotein signal peptidase b0028 710960 - 711397 + | FKBP-type peptidyl-prolyl cis-trans isomerase TERM 826 711518 - 711540 + G 83 -6.3 -4.83615 | gap 1 CCGCTATGTGGTTGA TAGCC-TGCG TGAG CGCGGGGCTA TTTTTATCGAGGATA ispH 711378 - 712331 + | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase TERM 827 712361 - 712378 + F 100 -8.4 -5.29782 | opp_overlap 712361 TCATAACGTTATCAA GCAGCC CTGAGT GGCTGC TTTTTTATGGATGTA b0031 712666 - 713487 + | dihydrodipicolinate reductase TERM 828 713543 - 713561 + F 100 -8.2 -6.12458 | opp_overlap 713543 713541 AATCATATGATAACA GGGCAATA TTT TATTGTCC TTTTTTGTTTTTTTA TERM 829 714700 - 714679 - g 72 -10.1 -3.05596 | opp_overlap 714674 CATTTTCTTATCCAA CGGCCCAGG TGAC CCTGAGCCA TGCGATTATGCTATC b0032 713960 - 715123 + | carbamoyl phosphate synthase small subunit TERM 830 715183 - 715165 - g 73 -2.2 -5.07275 | opp_overlap 715176, overlap 715169 GTACAGATATAAAAA GCATCCTG ATT CTGGGCGC AGGCCCAATCGTTAT carB 715140 - 718373 + | carbamoyl phosphate synthase large subunit TERM 831 718411 - 718392 - T 93 -13.6 -2.89797 | opp_overlap 718392, overlap 718389 718387 TCGGCATAAATAGCA GGGCGATG GAGA CATCGCCC TTTTTTATGCTCACT TERM 832 718392 - 718411 + T 100 -13.6 -5.31877 | opp_overlap 718392 718389 718387 TCGGCATAAATAGCA GGGCGATG GAGA CATCGCCC TTTTTTATGCTCACT YE0623 719185 - 718571 - | putative LysE type translocator TERM 833 719060 - 719099 + g 85 -7.8 -4.7497 | gap 1, overlap 719052 CAAAATTACGCCGAG CGCTGTCATC-ATTGCTGC GGG GCGGCGATAGCGGGCAGCG TTTTTAATCACTAAA b4364 719338 - 720135 + | hypothetical protein YE0625 720135 - 720599 + | hypothetical protein TERM 834 720822 - 720808 - g 71 -6.4 -4.18494 | overlap 720809 TATTGGTATGGAAAA CGCCAT GCC ATGGCA CTTACCAGCCGATTT folA 720773 - 721234 + | dihydrofolate reductase apaH 722260 - 721382 - | diadenosine tetraphosphatase apaG 722652 - 722275 - | ApaG ksgA 723484 - 722666 - | dimethyladenosine transferase pdxA 724472 - 723477 - | 4-hydroxythreonine-4-phosphate dehydrogenase TERM 835 723694 - 723708 + g 71 -8.6 -3.69483 | overlap 723692 ATCGCAAGGACGGCA TCTGCA TGT TGCAGA TATTTTGGCTGAAAT b0053 725760 - 724456 - | peptidyl-prolyl cis-trans isomerase SurA b0054 728194 - 725828 - | organic solvent tolerance protein djlA 728454 - 729206 + | DNA-J like membrane chaperone protein TERM 836 729260 - 729233 - T 100 -11.4 -4.20696 | opp_overlap 729233 TCAGGAACGCTAAAA CCAGATCGGA GTCACTGT TCCGATCTGG TTTGATCCTGAATCG TERM 837 729233 - 729260 + T 100 -12.8 -3.79747 | opp_overlap 729233 TCAGGAACGCTAAAA CCAGATCGGAGT CACT GTTCCGATCTGG TTTGATCCTGAATCG rluA 729882 - 729292 - | ribosomal large subunit pseudouridine synthase A TERM 838 729893 - 729905 + r 72 -7.7 -3.85817 | ACCATGATGTGCTCA TCCTG ATA CAGGA TTTGTAGCCAAGGAT TERM 839 730007 - 729990 - R 76 -7.7 -4.10672 | gap 1, opp_overlap 729990 CGAACTGAAAGGAAA CCGGGCAC TGA GT-CCCGG TTTTTAGCCTTAAAA TERM 840 729990 - 730007 + r 86 -7.7 -4.66833 | gap 1, opp_overlap 729990 CGAACTGAAAGGAAA CCGGGCAC TGA GT-CCCGG TTTTTAGCCTTAAAA hepA 732929 - 730023 - | ATP-dependent helicase HepA TERM 841 732582 - 732544 - G 73 -8.1 -4.08216 | overlap 732545 TTACGGGCGCGAAAA CGCAGGGCAAACCGATC CATGC GATCGATCTGACCGGCA AATAATCTGTCTTGC dinA 735438 - 733066 - | DNA polymerase II TERM 842 734950 - 734977 + g 73 -8.4 -3.83026 | AAGCTCGCCGTGTTC GCTGGTTTCGAT ATCC AGCGACACCAGC TTTAGTGTCGGGCGA TERM 843 735985 - 736019 + G 85 -12.3 -3.41693 | gap 2 TGGTGGGTATGTTAC TGC-CCGGCAC-GGTCA TGA TGACCAGTGTCGGCGCA TTGATTGGTAGTGGC TERM 844 736176 - 736164 - g 71 -4.8 -4.64992 | CTGAAAAAACATAAA TCGC TATTG GCGA AAACTGAGCATGCAT YE0639 735879 - 736649 + | DedA family membrane protein thiQ 737292 - 736636 - | thiamine transporter ATP-binding subunit thiP 738871 - 737324 - | thiamine transporter membrane protein TERM 845 737777 - 737765 - G 91 -6.9 -5.31855 | GAGTAATAAGAAAAA GCCGG TCG CCAGC ACGATACCCGGCATC tbpA 739869 - 738907 - | thiamine transporter substrate binding subunit TERM 846 739754 - 739764 + g 75 -3.2 -5.14563 | TGGCAATCGCACTCG GCTT CAA AGGC TTTTTTAATGGCAGG TERM 847 740306 - 740316 + H 81 -4 -5.33866 | opp_overlap 740306 CCGATTGGAAGATAA GATA TTC TATC TTTTTTGTGAGTTTA YE0643 740349 - 741152 + | hypothetical protein TERM 848 741163 - 741177 + T 81 -7.1 -4.68451 | TTTAATGAAGTCTAA GGGGA ACTAC TCCCC TTTATTCTTATTTTT TERM 849 741639 - 741611 - T 84 -11.7 -3.17051 | overlap 741609 CTGTTATTATCAACA TCCCCGCAGAGTA TTA TTCTCCGCAGGGA AAGTGAATAGAGTTT TERM 850 741701 - 741678 - T 71 -9.6 -2.90615 | overlap 741675 AGGCGGTGTAAACCA GGCCGATTTG AAAT CAAACCAGCC GAGGGTATTCATACG YE0644 743315 - 741654 - | transcriptional regulator SgrR TERM 851 743331 - 743320 - H 75 -5.8 -4.60797 | GCGGTAGACATAAAA GAGG AACT CCTC GACAAATTTCATCAA TERM 852 744172 - 744186 + G 71 -4.3 -4.78149 | GCGGATGAGATTGGA GTGAA AGAGA TTCAC TTTTTGCCTTATCAC YE0645 743440 - 744339 + | putative pyruvate formate-lyase 3 activating enzyme TERM 853 744439 - 744419 - g 75 -7.6 -4.1721 | gap 1 ATTCATATTGTAAAA CCGC-CAGT CTGT ACTGAGCGG GCTGTGCACTATACC TERM 854 744748 - 744695 - g 90 -10.4 -4.34866 | gap 2, opp_overlap 744747, overlap 744745 AGTGAAGAAGACAAA GCGGTATTACACCAGTTGTGCCCGTG GTGG CGCGGTCA-AAC-GGTGCAAGACCGC TGCTACGGCATGTTT TERM 855 744829 - 744806 - g 76 -7.4 -4.4648 | gap 1, opp_overlap 744827 ACCGGCATTATAAAA GCC-GAGGGCA ATA TGACCTCTGGC GATGCGCATTTGGCG YE0646 744344 - 746776 + | putative formate acetyltransferase TERM 856 746832 - 746853 + F 100 -12.3 -5.71983 | TGGTGAGTTTCACCA GCCAGTGGT TTAT GCCACTGGC TTTTTTTATCCTTGA YE0647 746972 - 747175 + | putative DNA-damage-inducible protein setA 747546 - 748727 + | sugar efflux transporter TERM 857 748727 - 748742 + T 86 -11.8 -2.93723 | opp_overlap 748722, overlap 748722 AGTGAGGGAAGCTTA GCGCCC CGTA GGGCGC TGTGATTGGTGAACA TERM 858 748870 - 748881 + T 70 -5.8 -4.25104 | TTAACTCAGTCAGGG CGCT GTGT AGCG TTTTAGTAAACGGGC mtr 750146 - 748884 - | tryptophan permease TERM 859 749761 - 749727 - G 73 -7.1 -4.22748 | opp_overlap 749732 749734 GACGAATAAAGCAAA GAACAGGCCGCCCAG TCGGG CTGGGAAGTCTATTC CCATTCCGCGTAGCG TERM 860 750244 - 750254 + r 73 -8.2 -3.69684 | overlap 750242 CGTGGTCTTGGTATG GCGG TTG CCGC TTATTCGATAGGTTT tnaA 751655 - 750255 - | tryptophanase TERM 861 751004 - 750982 - G 70 -2.5 -4.84359 | overlap 750984 GCATTTTCACAAAAA CGGGCGGAG TCAAT CACCACCGG AATATTATGCTGTTG TERM 862 752271 - 752302 + r 91 -13.2 -2.78596 | gap 1 TTTTATCGATTTTAA TTGTTGG-GTCAGGG GCA TCCTGACACCAACAA TATACTCACAAAATA leuD 752893 - 752330 - | isopropylmalate isomerase small subunit leuC 754395 - 752965 - | isopropylmalate isomerase large subunit TERM 863 753794 - 753806 + g 85 -10.5 -4.12902 | opp_overlap 753785 753782 ACATGACCAGTACCA CCGGC GCT GCCGG TTTTGCCGATAATTG leuB 755494 - 754397 - | 3-isopropylmalate dehydrogenase leuA 757053 - 755491 - | 2-isopropylmalate synthase TERM 864 757102 - 757121 + H 86 -10.6 -3.83155 | opp_overlap 757103, overlap 757103 AGCGGGTAAAAAAAA ACCCGCGC ATTT GCGCGGGC TTGTTAATCTTGATG TERM 865 757120 - 757103 - H 100 -14.1 -6.06723 | opp_overlap 757103 757102 GCGGGTAAAAAAAAA CCCGCGC ATTT GCGCGGG CTTGTTAATCTTGAT TERM 866 757103 - 757120 + H 95 -14.1 -2.8917 | opp_overlap 757103, overlap 757102 GCGGGTAAAAAAAAA CCCGCGC ATTT GCGCGGG CTTGTTAATCTTGAT leuO 758158 - 759114 + | leucine transcriptional activator TERM 867 760512 - 760532 + G 71 -4.7 -4.57341 | overlap 760514 GCGGCAGGTGCTCGA CTGGATGAT AAT ATCATTCTG TTTTTCCAGGCAATT YE0656 759447 - 761246 + | putative AMP-binding enzyme-family protein TERM 868 761262 - 761305 + F 71 -9.6 -2.91276 | overlap 761261 761265 761269 CCCAGCATCATTTTC ACGGTAACGGCCGATATC TGTCTGAT GATAGCGGCCGTTGCTGA CTTTCTGACCAAGCG TERM 869 761265 - 761302 + F 83 -12.1 -2.70354 | overlap 761262 761261 761269 AGCATCATTTTCACG GTAACGGCCGATATC TGTCTGAT GATAGCGGCCGTTGC TGACTTTCTGACCAA TERM 870 761269 - 761298 + F 74 -9.3 -3.26546 | overlap 761265 761262 761261 TCATTTTCACGGTAA CGGCCGATATC TGTCTGAT GATAGCGGCCG TTGCTGACTTTCTGA ilvI 761712 - 763439 + | acetolactate synthase 3 catalytic subunit ilvH 763442 - 763936 + | acetolactate synthase 3 regulatory subunit TERM 871 763974 - 763993 + F 100 -11.4 -6.25741 | opp_overlap 763971 763973 ATCTCCAATAATCAG GCTCAGCC AGTA GGCTGGGC TTTTTTTTCTTATTT cra 764279 - 765283 + | DNA-binding transcriptional regulator FruR TERM 872 765322 - 765300 - T 73 -8.5 -3.73224 | gap 1, opp_overlap 765303 CTACGCTTTAGCAAA TCAGGG-CTC GTTG GAGGCCCTGA TTGCAAGTCACAACA YE0662 765785 - 765339 - | hypothetical protein TERM 873 765412 - 765388 - G 73 -2.1 -5.09173 | overlap 765390 CAATACTCCAAAAAA TAGCCATAAGC CAC ACCCATAGCCA TTGAAACCAAGGCGT TERM 874 766905 - 766925 + G 85 -9.7 -4.46854 | opp_overlap 766902 766906, overlap 766906 766921 GTCGAGCATGAACCC AGCTGAACG TCG CGTTCAGCG TTTGTTGTTAGGTCA TERM 875 766906 - 766924 + G 91 -13.2 -3.27389 | opp_overlap 766902 766906, overlap 766905 766921 TCGAGCATGAACCCA GCTGAACG TCG CGTTCAGC GTTTGTTGTTAGGTC TERM 876 766924 - 766906 - g 84 -13.2 -2.57795 | opp_overlap 766906 766905 766921, overlap 766902 TCGAGCATGAACCCA GCTGAACG TCG CGTTCAGC GTTTGTTGTTAGGTC YE0663 766702 - 767160 + | cell division protein MraZ TERM 877 767200 - 767182 - g 70 -2.4 -4.97957 | overlap 767183 TAGATAACAACAAAA CTGTAGAT AAC AACTACAA GCATACAAGCGTATT TERM 878 768055 - 768030 - g 71 -9 -3.57144 | GGTCGCACCTTGAAA TCTGTCGGCA AAATGA TGCCGCCAGA TGCTGAAGTGGCCGA mraW 767163 - 768125 + | S-adenosyl-methyltransferase MraW TERM 879 768216 - 768227 + G 76 -2.2 -5.18726 | TACTGATTGCGGTGT TGGT GTCT GCCA TTTTTGTTGTGACCA ftsL 768122 - 768442 + | cell division protein FtsL TERM 880 768547 - 768567 + G 83 -9.7 -4.31085 | opp_overlap 768548, overlap 768548 GCGCCAGGAAGAACA AGCCAGCTT TAT AAGCTGGCG TTTTGCGTTGCTGTG TERM 881 768566 - 768548 - g 100 -13.2 -3.99374 | opp_overlap 768547 768548 CGCCAGGAAGAACAA GCCAGCTT TAT AAGCTGGC GTTTTGCGTTGCTGT TERM 882 768548 - 768566 + G 88 -13.2 -3.17928 | opp_overlap 768548, overlap 768547 CGCCAGGAAGAACAA GCCAGCTT TAT AAGCTGGC GTTTTGCGTTGCTGT TERM 883 769868 - 769844 - g 71 -8.5 -3.78775 | CTGTCGATTACTAAA GTTGACCCGCC AGT GGCCGGTGAAC GCGTCTTCCCTGAAC ftsI 768503 - 770266 + | penicillin-binding protein 3 TERM 884 770900 - 770875 - g 73 -10.5 -3.20723 | TGTTCACTAACTTAA GCCGTGATCAT CTGG ATTATCACGGC AATATGGCCAGTTAC murE 770268 - 771740 + | UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase TERM 885 773016 - 773027 + G 72 -5.8 -4.41895 | TGCTGCTCGAACATC CGGT TATC ACCG TTTTAATTAAAGGTT murF 771737 - 773101 + | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase mraY 773095 - 774177 + | phospho-N-acetylmuramoyl-pentapeptide-transferase TERM 886 774261 - 774277 + G 76 -11.5 -2.80816 | GATTTCTTCATTGCG CGTGGCG TAA CGCCGCG TGTGATGGATACCCG TERM 887 774783 - 774801 + G 71 -10.2 -2.87344 | opp_overlap 774780 GGTTTGCAGCAATAT CGCGCAGC TAA GCTGCGGG TATATGAAAACGCTA TERM 888 775259 - 775270 + G 85 -7.2 -5.00616 | opp_overlap 775246 ATCGGCAGATTTCTC CGGG TTGA CCCG TTTTTTGCAAGGCGA murD 774180 - 775514 + | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase ftsW 775514 - 776716 + | cell division protein FtsW murG 776713 - 777780 + | N-acetylglucosaminyl transferase TERM 889 777864 - 777853 - f 71 -2.2 -5.17507 | AAAAGTGAAGAAAAA CGTG AATA CACA GCAACTGGCGAAACT murC 777854 - 779329 + | UDP-N-acetylmuramate--L-alanine ligase ddl 779322 - 780242 + | D-alanine--D-alanine ligase ftsQ 780244 - 781101 + | cell division protein FtsQ ftsA 781098 - 782354 + | cell division protein FtsA ftsZ 782427 - 783578 + | cell division protein FtsZ lpxC 783664 - 784599 + | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase TERM 890 784674 - 784652 - T 70 -9.3 -2.79684 | opp_overlap 784656, overlap 784656 GCAGCAATCGAATGA CAAATTGGT TCCCG ACCAATTTG AACAGCATTTATGCT TERM 891 784701 - 784722 + T 95 -13.1 -3.15544 | opp_overlap 784712 TGCTAGCCCGTAGGG TGAGCCTCA AAGA TGAGGCTCA TTCATCCCGCTGAGC TERM 892 784822 - 784859 + T 81 -11.4 -2.74741 | ATTTATTTATCACTT TTGGTTGTGCTGGC ACTCTCTCCG GCCAGCGCAGCCAA TCGTTCCAATATCGT YE0679 785339 - 784809 - | hypothetical protein YE0680 785362 - 785895 + | SecA regulator SecM TERM 893 785935 - 785949 + F 79 -7.8 -4.37092 | TTATACAACTTTTGG CCACCG GTT TGGTGG TTTTGTAAGAGACAT TERM 894 787089 - 787079 - g 77 -6.8 -4.50661 | opp_overlap 787078 AATTCAGAACGAAAA CCAG ACG CTGG CTTCAATCACTTTCC TERM 895 787152 - 787131 - g 75 -5.1 -4.72272 | gap 1 CGCCTCTATGAAAAA CTG-GCCGGT ATG ACCGGTACAG CAGATACCGAAGCAT secA 785973 - 788687 + | preprotein translocase subunit SecA TERM 896 788721 - 788740 + F 91 -7.8 -4.80487 | opp_overlap 788718 788721 ATGCATTGATAACGA GGGCGG CTTAAACA CCGCCC TTTATTTTGCTTATC mutT 788821 - 789207 + | nucleoside triphosphate pyrophosphohydrolase TERM 897 789265 - 789229 - T 70 -8.1 -3.71284 | overlap 789233 GGGGCATTAAGATAA GTTAGATGGAGCAAA ATATCCG TTTGCTCCATCTGGC CAGGCTGCGACTGCT TERM 898 789261 - 789233 - T 83 -11.9 -2.66969 | overlap 789229 CATTAAGATAAGTTA GATGGAGCAAA ATATCCG TTTGCTCCATC TGGCCAGGCTGCGAC YE0683 789485 - 789279 - | zinc-binding protein YE0684 790282 - 789530 - | hypothetical protein coaE 790899 - 790279 - | dephospho-CoA kinase guaC 791193 - 792236 + | guanosine 5'-monophosphate oxidoreductase TERM 899 792401 - 792429 + T 90 -11 -3.9749 | gap 1, overlap 792402 CCCCTCCCTGGGGAC TCGATCCGCGCCA TCCC TGGCGCGGA-CGC TTTACTCTTCTACCT TERM 900 792402 - 792428 + T 100 -14.5 -2.97771 | gap 1, overlap 792401 CCCTCCCTGGGGACT CGATCCGCGCCA TCCC TGGCGCGGA-CG CTTTACTCTTCTACC hofC 793754 - 792555 - | type IV pilin biogenesis protein hofC 795205 - 793751 - | hypothetical protein TERM 901 795015 - 795029 + g 78 -11.4 -3.07005 | AGTGATTGCTCAATT CTGGCC TCC GGCCAG TATTCCACCTTGATT ppdD 795656 - 795222 - | putative major pilin subunit TERM 902 795263 - 795273 + g 71 -6.8 -4.21438 | CGGTCTTACAGTTTT CAGC AAT GCTG TTATTTGTTGCGGTA TERM 903 795846 - 795789 - R 75 -8.8 -3.646 | gap 3 CTGAATCACAGATAA TTTCGGCGG-T-GCTCGCAA-AACAGA ATAAGGG CCTGCTATTACGAGCCATCCGCCGAAA ATAATTTGGTAGGAT nadC 796769 - 795861 - | quinolinate phosphoribosyltransferase TERM 904 796587 - 796571 - G 91 -6.5 -5.31275 | overlap 796573 GTTCACCACAAAAAA CACCCGC TTC ACGGGTA ATGATGGTTGCCTCT TERM 905 796585 - 796573 - G 71 -6.9 -4.29153 | overlap 796571 TCACCACAAAAAACA CCCGC TTC ACGGG TAATGATGGTTGCCT ampD 796999 - 797463 + | N-acetyl-anhydromuranmyl-L-alanine amidase ampE 797608 - 798462 + | regulatory protein AmpE TERM 906 798489 - 798512 + F 100 -14 -5.05782 | opp_overlap 798486 TTGGTTTAATGAGTG GGGCTGATAA TGAT TTATCAGCCC TTTTTTAAGATAACT TERM 907 799864 - 799878 + G 73 -7.8 -3.96618 | opp_overlap 799860 799858 TATGAGCAATACTTC GGTGAC GAA GTCGCC TTGTTTGGCATTAAC TERM 908 800415 - 800398 - g 95 -8.5 -5.28176 | GCGATTGATAAAAAA GGAAACT ATTC AGTTTCC GGCTCAACCAATGTT TERM 909 801599 - 801581 - g 71 -3.8 -4.66833 | opp_overlap 801594, overlap 801583 801587 801594 CCGCAACCGGAAAAA CTCAAACC AAC GATTTGGG TGAGACACAAATTAC TERM 910 801837 - 801822 - g 85 -5.4 -5.28983 | gap 1, opp_overlap 801835 GGTAAAAGACAAAAA CGGCCAC GTT GTG-CCG AACAGTCCGGTGCTG TERM 911 803021 - 803006 - g 77 -6.8 -4.51363 | CATCAAATATCAAAA CCGCCA AAGC TGACGG TAAGGAAAGCATTAC TERM 912 804056 - 804018 - g 87 -6.9 -5.15634 | gap 2, opp_overlap 804055, overlap 804002 CACCTCACCAAAAAA GGGTGAGC-ATGGCTT-GA AAA TCGAAACCATTGCTAACCC ATCCGGCGACGGTTA TERM 913 804646 - 804632 - g 79 -2.1 -5.42862 | ATAGCCTGAAAAAAA TAACG TTAAG CGCTA ATCCAATGAAAGATA TERM 914 805176 - 805195 + G 82 -12.2 -3.14132 | opp_overlap 805165 805172 805173 805176 GATATGGCAAACTGA CAGTGGCA AGAT TGCCACTG TTGATAAGGGGGGAC TERM 915 805195 - 805176 - g 78 -12.2 -2.6583 | opp_overlap 805176, overlap 805165 805172 805173 GATATGGCAAACTGA CAGTGGCA AGAT TGCCACTG TTGATAAGGGGGGAC TERM 916 806247 - 806235 - g 74 -6.3 -4.45544 | GTGTATTAAGGAAAA GTATG GTA CATAC AAAACTTATATGGAT YE0694 798922 - 806376 + | putative adhesin TERM 917 806430 - 806456 + T 100 -15.9 -4.84918 | opp_overlap 806430 CAGTAACAACATAAA GAGGGCTGCGC CTACC GTGCAGCCCTC TTTTCTATTTATCGA TERM 918 806456 - 806430 - T 100 -13.7 -4.3587 | opp_overlap 806430 CAGTAACAACATAAA GAGGGCTGCGC CTACC GTGCAGCCCTC TTTTCTATTTATCGA aroP 807838 - 806465 - | aromatic amino acid transport protein TERM 919 809115 - 809147 + G 71 -4.8 -4.58283 | gap 1, opp_overlap 809115, overlap 809105 ACTCGCGCCGCGAAA TGCTGGCAACGGTGA GCAG TCACCGC-GCCGGGA TTTTTGAGGCGATTG pdhR 808535 - 809299 + | transcriptional regulator PdhR TERM 920 810908 - 810894 - g 73 -7.1 -4.19704 | opp_overlap 810893 810887 810886 810894 TAAGTTCACTGAAAA GCTGG AAATG CCAGC ATTGTCAGATTTCAG aceE 809476 - 812139 + | pyruvate dehydrogenase subunit E1 TERM 921 812402 - 812382 - g 100 -16.9 -3.34344 | TGATCTTCGAAGCAA CAGGTGCCG CTG CGGCACCTG CTAAAGCGGAAGAGA aceF 812153 - 814030 + | dihydrolipoamide acetyltransferase TERM 922 814038 - 814056 + F 81 -9.5 -3.82084 | opp_overlap 814035 814038 TGATGTAATCGACAA GGCCGGC TTAGT GCTGGCC TTATTACTATTACAG TERM 923 814098 - 814128 + F 70 -7.6 -3.62046 | opp_overlap 814075 814094 814086, overlap 814090 ACAGTTATGAACCGG CTTTGTCGGCTCGT TAC ATAAGTCGACAAGG TTGTTGAGACACTCG lpd 814406 - 815833 + | dihydrolipoamide dehydrogenase TERM 924 815881 - 815862 - T 74 -9.2 -3.28453 | opp_overlap 815862, overlap 815860 815858 CAGTAAGATAATAGA CGGCTCCT GAAT AGGGGCCG TTTGAGGTTAATGAC TERM 925 815862 - 815881 + T 90 -11.4 -3.67976 | opp_overlap 815862 815860 815858 CAGTAAGATAATAGA CGGCTCCT GAAT AGGGGCCG TTTGAGGTTAATGAC TERM 926 815964 - 815985 + T 71 -9.3 -3.0364 | opp_overlap 815936 815934, overlap 815961 TCCCTGGGGGTTCAA GCCGCGCCG TCCG TGGCGCGGA TGCTTTACTCTTCTA TERM 927 816053 - 816072 + T 100 -11.4 -5.95539 | GTCAGCAGTCTGAGA CGGCTCCT GAAT AGGGGCCG TTTTTTTGTTTAAAG YE0703 817153 - 816140 - | AraC family transcription regulator TERM 928 816559 - 816543 - G 70 -9.5 -3.18536 | overlap 816541 ATAATTAAGCCAATA CATTGTG TTT CACAATG CAAACGTTCCAGTGG YE0704 817425 - 819674 + | outer membrane receptor FepA TERM 929 820369 - 820354 - g 91 -6.8 -5.2189 | overlap 820356 TGAATCATTAAAAAA TCCGCC GGCG GGCGAA GATGAATTCCTGTTA TERM 930 820646 - 820630 - g 73 -9.5 -3.30124 | GCTGATGTTTGATAA CTTCTAC GAT GTAGAAG AAAAAGCCAAAGCAG TERM 931 820871 - 820858 - g 71 -4.5 -4.59773 | opp_overlap 820858 GGCGATGCTGAAAAA TGCCC GTGA AGGCA TTCATCCGGATCAAC acnB 820247 - 822844 + | bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase TERM 932 822901 - 822921 + F 100 -18.3 -4.45168 | ATAATACCTATCTGA CGGGAGGCC TAT GGCCTCCCG TTTCTATTTTAAAAG YE0706 823034 - 823396 + | hypothetical protein yddG 824327 - 823440 - | hypothetical protein TERM 933 823590 - 823613 + g 100 -9.6 -5.14965 | gap 1, opp_overlap 823590 823589 TGTGAAGTAAGACAG GGCAGCGACCA GTG TGG-CGTTGCC TTTTTTCATGGCGAT YE0708 824685 - 825149 + | hypothetical protein TERM 934 825217 - 825249 + T 76 -10.7 -2.6155 | opp_overlap 825224, overlap 825224 GCTCAACTGCCTTAA TCAAAAATCCCGG CGAAAAA CCGGGATTTTAGA CTTGATATTACCCAA TERM 935 825242 - 825224 - T 91 -8.1 -4.8622 | opp_overlap 825217 825224 TGCCTTAATCAAAAA TCCCGGC GAAAA ACCGGGA TTTTAGACTTGATAT TERM 936 825224 - 825242 + T 73 -7.4 -4.21098 | opp_overlap 825224, overlap 825217 TGCCTTAATCAAAAA TCCCGG CGAAAAA CCGGGA TTTTAGACTTGATAT speD 826065 - 825271 - | S-adenosylmethionine decarboxylase speE 826953 - 826090 - | spermidine synthase yacC 827415 - 827068 - | hypothetical protein TERM 937 827543 - 827561 + H 90 -11 -3.9712 | TTGATTACTCCTTGA CCTTCCCT CAA GGGGAAGG TTTATGCTGGCGTAC TERM 938 827694 - 827674 - g 76 -11.1 -3.20901 | opp_overlap 827673 ATTTTATTAAGTTAA CGGCAGCTC TTG GAGCCGCCA CTTCACTGCCTTTAT TERM 939 828882 - 828892 + G 71 -4.6 -4.54727 | overlap 828870 CATGGAGCGATGACC GCGG CTC CTGC TTTTGATTTCAGCCA TERM 940 829090 - 829064 - g 71 -6.4 -4.18494 | opp_overlap 829078 TATTCTCACCGAAAA CGGCAACCCACC TGC GGAGCATCGCCG TGGTTGGAAAGATAC yacK 827646 - 829247 + | multicopper oxidase b0125 829362 - 829898 + | hypoxanthine phosphoribosyltransferase yadF 830669 - 830007 - | putative carbonic anhydrase TERM 941 830133 - 830147 + g 70 -7.8 -3.86194 | opp_overlap 830122 AATACCATAGACCCA GCCGTG AAT CATGGC TTTCTGCCCGCGCTT TERM 942 830575 - 830562 - G 70 -2.3 -4.92314 | opp_overlap 830571, overlap 830556 830553 ACCAATCCACAAAAA CCGAG GTTT CTGGG CTTCCGCCAAGTGTT TERM 943 830755 - 830766 + H 71 -3 -4.96848 | GGAACAGTGACTTTG TTGT TGGT ACAA TTTTTGTCTGCGCAA yadG 830904 - 831830 + | putative ABC transporter, ATP-binding protein yadH 831827 - 832597 + | putative ABC transporter, integral membrane protein YE0717 833072 - 834262 + | hypothetical protein TERM 944 834314 - 834296 - T 82 -4.5 -5.29716 | TGAAGATAAGAAAAA GGTGCTT TAATT AAGCGCC TTGAGGTTGCTGACA TERM 945 834449 - 834467 + T 100 -10.3 -5.55769 | TTGTCAACGGTCTGA GGCGCTT TAATT AAGCGCC TTTTTTATTGTGCGG panD 834882 - 834502 - | aspartate alpha-decarboxylase TERM 946 834739 - 834722 - G 71 -4.1 -4.6902 | GCATAAGTCGAAAAA CGCTGAC CATT ATCAACG TTATAAATATCAATG panC 835894 - 835040 - | pantoate--beta-alanine ligase TERM 947 835238 - 835252 + g 70 -7.8 -3.85698 | overlap 835239 ATCATCAATCTGCCG TTCGCC CAA GGCGAG TTTCTCAGCCAACGC TERM 948 835760 - 835732 - G 70 -2.3 -4.87665 | overlap 835734 GCGGATTGACAAAAA TACTCACGACGAC AAC ATCGGCACGAGTT TTGGCATCTTCCACC panB 836868 - 836068 - | 3-methyl-2-oxobutanoate hydroxymethyltransferase TERM 949 837037 - 837007 - R 71 -9.1 -3.34517 | gap 1, opp_overlap 837007 837016, overlap 837016 AGGCCGCTGCAAACA GCGTTCAAATCGGT TATC ACCGATTTGT-CGC TCAGTTGCCGCCTTC folK 837581 - 837102 - | 2-amino-4-hydroxy-6-hydroxymethyldihydropteridi ne pyrophosphokinase TERM 950 837241 - 837256 + g 73 -3.2 -4.86001 | overlap 837242 AGGCCATAATGTGGC ACGATC AGAC GATCGG TTTTTATCACCTGAT pcnB 838912 - 837590 - | poly(A) polymerase I TERM 951 839214 - 839192 - R 73 -2.7 -5.21506 | gap 1 AGAACAACAGAAAAA CAGCG-GCTA ATCA TAGCTCACCG TGGTTCCTTTGAGAA yadB 840138 - 839209 - | glutamyl-Q tRNA(Asp) synthetase TERM 952 840198 - 840169 - R 72 -7.7 -3.87994 | opp_overlap 840162 840163 840178, overlap 840170 ATCCAGCGTGATAAA TGCGGTGCCGGAG GTGG CTCTGGCACCGTG TCACATCCTTCGTAT TERM 953 840197 - 840170 - R 79 -11.2 -2.92475 | opp_overlap 840162 840163 840178, overlap 840169 TCCAGCGTGATAAAT GCGGTGCCGGAG GTGG CTCTGGCACCGT GTCACATCCTTCGTA dksA 840734 - 840279 - | DnaK transcriptional regulator DksA TERM 954 840783 - 840769 - R 70 -7.8 -3.68827 | TACGCACTATCGAAA TCCCCA ATA CGGGGA AAAATCAGGCCGCTA sfs1 841639 - 840914 - | sugar fermentation stimulation protein A ligT 842226 - 841669 - | putative 2'-5' RNA ligase TERM 955 841727 - 841712 - G 75 -10.4 -3.34043 | TGCACCATGTTATAA CGCGTG CGGC CACGCG CATATACCGACTCAT TERM 956 842629 - 842613 - g 80 -7.2 -4.55798 | GAGCCGAAAGCAAAA GCGGGC CGAAT ACCCGC CTTGAGGTGGTAACC TERM 957 844761 - 844721 - g 91 -13.4 -3.59979 | gap 1 GGGCGCTATCCCAAA CATGTCTGGCCGGATGATC CCGC GAACACCCGGCCA-ACACG CAGAACCAAGAAGTA hrpB 842483 - 844789 + | ATP-dependent RNA helicase HrpB TERM 958 845135 - 845125 - g 73 -2.4 -5.02074 | CCACCCCGCAAAAAA CGCC GTT GGCT TGGGTTATTTATCAA mrcB 844897 - 847401 + | penicillin-binding protein 1b TERM 959 847406 - 847446 + F 86 -9.1 -4.25401 | opp_overlap 847388 847410 847413, overlap 847410 847413 TCGGCCAATAAAGCC CAAACAATTGGCACGGTTA CTG TTATCGTGCCAATTGTTCA TTTCTCTTCACTTTC TERM 960 847410 - 847442 + F 100 -14.3 -3.69341 | opp_overlap 847388 847410 847413, overlap 847406 847413 CCAATAAAGCCCAAA CAATTGGCACGGTTA CTG TTATCGTGCCAATTG TTCATTTCTCTTCAC TERM 961 847442 - 847410 - f 100 -12.1 -3.76534 | opp_overlap 847406 847410 847413, overlap 847388 847413 CCAATAAAGCCCAAA CAATTGGCACGGTTA CTG TTATCGTGCCAATTG TTCATTTCTCTTCAC TERM 962 847439 - 847413 - f 74 -8 -3.99407 | opp_overlap 847413 847410 847406, overlap 847410 ATAAAGCCCAAACAA TTGGCACGGTTA CTG TTATCGTGCCAA TTGTTCATTTCTCTT TERM 963 847413 - 847439 + F 89 -10.2 -3.95911 | opp_overlap 847410 847413, overlap 847410 847406 ATAAAGCCCAAACAA TTGGCACGGTTA CTG TTATCGTGCCAA TTGTTCATTTCTCTT fhuC 847658 - 848452 + | iron-hydroxamate transporter ATP-binding subunit TERM 964 849014 - 849027 + G 75 -5.3 -4.67943 | opp_overlap 849014 CCGCTAGCCGTAACA CATCA TTAC TGATG TTTTCTCTGTTGGAC fhuD 848599 - 849381 + | iron-hydroxamate transporter substrate-binding subunit fhuB 849378 - 851375 + | iron-hydroxamate transporter permease subunit TERM 965 851494 - 851509 + T 77 -10.4 -3.07845 | overlap 851492 851502 CTGTGCTCCTTACTC GGCCCA TCCC TGGGCC TCTCTGGTTGTTATT nark 853042 - 851651 - | nitrite extrusion protein TERM 966 853154 - 853178 + r 86 -10.2 -3.76048 | opp_overlap 853157, overlap 853157 TATTGCTGTGGCTTA TAACATGCAT TAAAT ATGCATGTTA TTGTGTTAATTAAAA TERM 967 853157 - 853175 + r 72 -7.5 -4.00234 | opp_overlap 853157, overlap 853154 TGCTGTGGCTTATAA CATGCAT TAAAT ATGCATG TTATTGTGTTAATTA TERM 968 853252 - 853228 - R 70 -5.9 -4.29929 | opp_overlap 853228 853238, overlap 853245 ATTAAATGTAATAAA TTCAATTAATT TAT AAATAATTGAA TTATTAATGATGTTA TERM 969 853350 - 853382 + r 82 -3.4 -5.49568 | opp_overlap 853350 GTTAAGCTGAAAAAA GACCCAAATTCTGT AACGC ACAGAACGTAGGTC TTTTTGTTTTAGCTT TERM 970 853382 - 853350 - R 100 -8.5 -5.09426 | opp_overlap 853350 GTTAAGCTGAAAAAA GACCCAAATTCTGTA ACG CACAGAACGTAGGTC TTTTTGTTTTAGCTT gsa 854736 - 853456 - | glutamate-1-semialdehyde aminotransferase yadQ 855114 - 856436 + | chloride channel protein YE0736 856554 - 856898 + | iron-sulfur cluster insertion protein ErpA TERM 971 857055 - 857075 + T 91 -3.9 -5.76633 | opp_overlap 857033 857055, overlap 857039 TTTGATAAAAAAAAA CCGCAAC CTCCATA GTCGCGG TTTTTTTATATCTGA TERM 972 857075 - 857055 - T 100 -6.8 -6.22802 | opp_overlap 857055 857039, overlap 857033 TTTGATAAAAAAAAA CCGCAACC TCCAT AGTCGCGG TTTTTTTATATCTGA TERM 973 857550 - 857524 - T 100 -15.3 -2.62184 | opp_overlap 857521 857517 TTTTTGTTTACAGCA CTTGTAGGCTC AGTAA GAGCCTACAAG GAAGCATATTGTATA yadS 858222 - 857611 - | hypothetical protein btuF 859025 - 858222 - | vitamin B12-transporter protein BtuF mtnN 859786 - 859085 - | 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase dgt 859995 - 861512 + | deoxyguanosinetriphosphate triphosphohydrolase degP 861811 - 863247 + | serine endoprotease TERM 974 863330 - 863305 - T 86 -10.5 -3.89055 | opp_overlap 863305 AGATACCGCCACAAA GGGCACAAC CGCTTATC GTTGTGCCC TTTCTATTTAGGTTT TERM 975 863305 - 863330 + T 100 -10.5 -4.37554 | opp_overlap 863305 AGATACCGCCACAAA GGGCACAAC CGCTTATC GTTGTGCCC TTTCTATTTAGGTTT barA 866194 - 863360 - | hybrid sensory histidine kinase BarA rumA 866251 - 867582 + | 23S rRNA 5-methyluridine methyltransferase TERM 976 869721 - 869706 - g 71 -4 -4.81551 | overlap 869708 869709 869720 TAGTGATACCAAAAA GATGAT GGCA ACCATC GATATGGATATCGAG relA 867592 - 869826 + | GDP/GTP pyrophosphokinase mazG 870102 - 870944 + | nucleoside triphosphate pyrophosphohydrolase pyrG 871156 - 872793 + | CTP synthetase TERM 977 872805 - 872832 + F 100 -13.4 -2.94938 | opp_overlap 872808, overlap 872798 872796 872790 872807 ATAAAATATTTGGTA GAAGGGGCGGCA GCGA TGTCGCCCCCTC TGTCTGGAGTTTTAG TERM 978 872807 - 872830 + F 76 -10.2 -3.02109 | opp_overlap 872808, overlap 872805 872798 872796 872790 AAAATATTTGGTAGA AGGGGCGGCA GCGA TGTCGCCCCC TCTGTCTGGAGTTTT TERM 979 872829 - 872808 - f 86 -11.5 -3.31515 | opp_overlap 872807 872805 872798 872796 872790 AAATATTTGGTAGAA GGGGCGGCA GCGA TGTCGCCCC CTCTGTCTGGAGTTT eno 872873 - 874168 + | phosphopyruvate hydratase TERM 980 874219 - 874206 - f 85 -9.5 -4.20106 | opp_overlap 874206 AAAGTTGATGGAAAA CCCGC TTCG GCGGG TTAATGAGATGGTCA TERM 981 874206 - 874219 + F 72 -9.5 -3.17212 | opp_overlap 874206 AAAGTTGATGGAAAA CCCGC TTCG GCGGG TTAATGAGATGGTCA TERM 982 874241 - 874265 + F 100 -10 -5.26119 | opp_overlap 874227 AGATGGTCACCCCCA CCCTGTGAGC GGTAA GCTGACAGGG TTTTCTTTTTGGAGG TERM 983 874904 - 874890 - g 73 -2.1 -5.15381 | overlap 874891 AAGAGAGTTAAAAAA CCATC TGGCC GATGA TGAAACAGCACAACG YE0748 874288 - 875292 + | transposase for insertion sequence element IS1328 TERM 984 875322 - 875295 - f 100 -11.4 -4.93877 | CTTCAGTAAATAAAA GAGCCAACAGTA AATC TACTGTCAGCTC AATGAGTTACCAAGT YE0749 875707 - 876336 + | hypothetical protein YE0750 876504 - 877382 + | hypothetical protein YE0751 877460 - 877783 + | hypothetical protein TERM 985 877837 - 877879 + F 76 -10.8 -2.64735 | gap 1 TAACCTATTATTACC GCTTGTTTCCTGCGAGATT AATCTG AATCTCGCAGGAA-CGACC TCATCTGACTCACAT TERM 986 878252 - 878227 - g 77 -10.5 -3.52113 | gap 1, opp_overlap 878215, overlap 878225 878234 ACCGGGGCAGAAAGA CGGTAAA-GCGG TGC CCGCACTTACCG CTGGCGGCCACTTTG TERM 987 878244 - 878234 - g 71 -8.2 -3.70571 | opp_overlap 878215, overlap 878227 878225 CAGAAAGACGGTAAA GCGG TGC CCGC ACTTACCGCTGGCGG sodC 877988 - 878512 + | superoxide dismutase TERM 988 878556 - 878527 - f 83 -9.4 -4.03413 | opp_overlap 878531, overlap 878514 878513 878531 ACTGTCTGATACAAA CAAACTGGTAGC GACGGT GTTACCAGTTTG GTCACAGCTATGGAA TERM 989 878668 - 878685 + G 74 -6.9 -4.33165 | AGGGCGAGGGTTACT TCACCGG CGTA CCGGCGA TTTTCGTGCGTTTGC YE0753 878616 - 879287 + | hypothetical protein TERM 990 879387 - 879401 + T 75 -8.6 -3.86015 | opp_overlap 879387 CAAGCAGCGTTCAAA TCTGCT CCC AGCAGA TTTGTCACCCGAATC TERM 991 879401 - 879387 - T 71 -8.6 -3.56568 | opp_overlap 879387 CAAGCAGCGTTCAAA TCTGCT CCC AGCAGA TTTGTCACCCGAATC ygcM 879882 - 879523 - | putative 6-pyruvoyl tetrahydrobiopterin synthase family protein cysJ 880250 - 882055 + | sulfite reductase subunit alpha cysI 882055 - 883785 + | sulfite reductase subunit beta cysH 883782 - 884516 + | phosphoadenosine phosphosulfate reductase YE0758 885036 - 884629 - | hypothetical protein YE0759 885364 - 885164 - | hypothetical protein TERM 992 885473 - 885491 + r 71 -6.6 -4.10672 | opp_overlap 885472 885473 GAAAACACGGAAAAG GGCGACCG TAC TGATCGCC TTTGATTTGAATTAA TERM 993 885542 - 885553 + r 71 -3 -5.00616 | overlap 885534 GCGTGGTGTTTCGCA TAGT GGAA ACTA TTTTTTAGCGGCAGC YE0760 886585 - 885551 - | alkaline phosphatase isozyme conversion aminopeptidase TERM 994 885970 - 885984 + g 77 -6.4 -4.52589 | TATCTAAATTGATCA CCAGCA ACG TGTTGG TTTTCTCTGCCGGAC TERM 995 887173 - 887207 + G 73 -7.3 -4.20368 | overlap 887175 887180 887185 ATCAACGGCATCTTC TG-GCGAACGTGGTTGA TGA TCAACCCCGTT-GCTCA TTTATCTTCCCGTCG TERM 996 887175 - 887204 + G 73 -10.1 -3.11182 | gap 1, overlap 887173 887180 887185 CAACGGCATCTTCTG GCGAACGTGGTTGA TGA TCAACCCCGTT-GC TCATTTATCTTCCCG TERM 997 887180 - 887200 + G 73 -9.7 -3.37141 | overlap 887175 887173 887185 GCATCTTCTGGCGAA CGTGGTTGA TGA TCAACCCCG TTGCTCATTTATCTT TERM 998 887999 - 888015 + G 71 -8.7 -3.64703 | GGCGCTCGCCCGTGG TCGCCAG ACG TTGGCGA TTTACATGGGCACAG cysG 886878 - 888296 + | siroheme synthase TERM 999 888802 - 888792 - g 71 -4.6 -4.62069 | overlap 888793 CTGGGACCCGAAAAA CCAG CGC CCGG AGCTGTGGCATAACT cysD 888307 - 889215 + | sulfate adenylyltransferase subunit 2 cysN 889289 - 890725 + | sulfate adenylyltransferase subunit 1 TERM 1000 891135 - 891149 + G 73 -7.1 -4.21351 | ATGGTGCGGGATATG CTGGC ATCAG GCCAG TTTATTGAGGTATTT cysC 890811 - 891377 + | adenylylsulfate kinase ygbE 891572 - 891889 + | hypothetical protein ftsB 892316 - 892639 + | cell division protein FtsB ispD 892757 - 893401 + | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase ispF 893416 - 893904 + | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase truD 893915 - 894964 + | tRNA pseudouridine synthase D surE 894942 - 895694 + | stationary phase survival protein SurE TERM 1001 895698 - 895670 - f 83 -8.9 -4.08394 | opp_overlap 895677, overlap 895671 AGACGTGGTTGAAAA CTGGTTAGCCAGC ATG GCTGATTAACCAA TATGAGGTCGACGGG TERM 1002 895697 - 895671 - f 76 -10.2 -3.04715 | opp_overlap 895677, overlap 895670 GACGTGGTTGAAAAC TGGTTAGCCAGC ATG GCTGATTAACCA ATATGAGGTCGACGG pcm 895716 - 896342 + | protein-L-isoaspartate O-methyltransferase TERM 1003 896766 - 896778 + G 75 -5.5 -4.68724 | CTATACCGTTAAACG CGGTG ACA CACTG TTTTATATTGCCTGG nlpD 896518 - 897501 + | lipoprotein NlpD appR 897556 - 898554 + | RNA polymerase sigma factor RpoS TERM 1004 898617 - 898582 - T 100 -12.8 -4.11773 | opp_overlap 898590, overlap 898590 AAACAGTCTGGAAAA CACAAAAACGGTGAAC TGAT GTTCACCGTTTTTTTA TGGCGACAATTAACC TERM 1005 898609 - 898590 - T 100 -12.2 -5.28983 | opp_overlap 898590, overlap 898582 TGGAAAACACAAAAA CGGTGAAC TGAT GTTCACCG TTTTTTTATGGCGAC TERM 1006 898590 - 898609 + T 100 -12.2 -5.60993 | opp_overlap 898582 898590 TGGAAAACACAAAAA CGGTGAAC TGAT GTTCACCG TTTTTTTATGGCGAC fdv 901198 - 898643 - | DNA mismatch repair protein TERM 1007 899427 - 899415 - G 73 -3.3 -4.99043 | overlap 899416 GGGTTAGAAATAAAA GGCTC ACT GAGCA CCTGCTCCACTACCG TERM 1008 901012 - 901027 + g 72 -6 -4.42653 | opp_overlap 900983 TAGGAATAGGTTCAC CGGCGG AAGC CCCCCG TTTTGTCAGTGAGAT YE0777 903021 - 901357 - | putative inner membrane protein YE0778 903389 - 903126 - | hypothetical protein TERM 1009 903418 - 903430 + H 70 -2.7 -5.05505 | ATGTGATTTAAATTT TAAGA GTG TCTTG TTTTTAATTTCTAAT mrpA 904320 - 904844 + | hypothetical protein TERM 1010 904863 - 904885 + F 100 -16.4 -5.0916 | overlap 904880 ACCCTTTTCTCATTG GACATGCGGA AAA TCCGCATGTC TTTTTCTCTTGAAAA mrfB 904929 - 905474 + | exported minor pilin protein mrfC 905480 - 908041 + | fimbrial outer membrane usher protein mrfD 908141 - 908908 + | pili chaperone protein mrfF 908962 - 909498 + | exported pilin protein mrfG 909498 - 909992 + | minor pili exported protein mrfH 910002 - 910547 + | exported pilin protein mrfJ 910632 - 911459 + | exported pilin protein YE0787 911488 - 911667 + | hypothetical protein YE0788 911785 - 911973 + | hypothetical protein TERM 1011 912013 - 912049 + F 78 -5.1 -5.0666 | overlap 912014 ATATTTAATCGTATC CCAGGCAAGTGCGGGAG GTA TTATTGTACTTGCCTGA TTTGTTTTTTAAATG TERM 1012 912014 - 912048 + F 73 -8.6 -3.62369 | overlap 912013 TATTTAATCGTATCC CAGGCAAGTGCGGGAG GTA TTATTGTACTTGCCTG ATTTGTTTTTTAAAT YE0789 912248 - 912874 + | putative thiol:disulfide interchange protein TERM 1013 913017 - 913037 + G 85 -11.1 -3.8698 | TCGTTTCTTGCTGAT GTTCGGTGC TTT GCACCGGGC TTTCGGTTTGGCTTC TERM 1014 913268 - 913279 + G 73 -7.2 -4.17316 | GTGCGCTGCATGACG CCGG TTCT CCGG TTATTTTGGCACCAT YE0790 912874 - 913830 + | hypothetical protein TERM 1015 915464 - 915440 - g 73 -7.9 -4.08945 | AGTACTTTGCTAAAA GTGATGGCA GGATTGA TGCCACCAC AGCAAGGGCAGGTAT YE0791 913856 - 916006 + | ABC transporter, ATP-binding component TERM 1016 916036 - 916053 + G 71 -4.8 -4.62669 | opp_overlap 916036 916035, overlap 916033 AAAAATAAGAAACAT CAGCTC ATGCTG GGGCTG TTTATTGTTTCGTTA TERM 1017 916064 - 916084 + G 71 -10.5 -2.80511 | overlap 916061 GGCTGTTTATTGTTT CGTTACTGA TTA TCAGTAGCG TCATTGCGTTGTCGA TERM 1018 917032 - 917014 - g 76 -9.6 -3.71848 | TTGGGTGAGCAACAA CCCGATAA GCG CTATCGGG TTCAGATTATCAACG YE0792 916006 - 917181 + | putative type I secretion protein YE0793 917171 - 919147 + | ABC transporter, ATP-binding component TERM 1019 920346 - 920314 - g 75 -5.5 -4.78107 | overlap 920319 TATCAGCAGCAAAAA CAGAATCAGTGGCAG AAC CTACAACTGAGTCAG CGGCGGTTAACTCTG TERM 1020 920341 - 920319 - g 71 -7 -4.11027 | overlap 920314 GCAGCAAAAACAGAA TCAGTGGCAG AAC CTACAACTGA GTCAGCGGCGGTTAA YE0794 919144 - 920550 + | putative outer-membrane efflux lipoprotein YE0795 920547 - 921797 + | putative acyl-carrier-protein YE0796 921908 - 922615 + | hypothetical protein TERM 1021 922609 - 922593 - f 70 -5.7 -4.29325 | CAGTAACATTGAAAA CGTGGCC GTT AGCCGCG CATTAAAAAGGATAA YE0797 922629 - 922877 + | hypothetical protein YE0798 922897 - 923616 + | putative acyl-carrier-protein YE0799 924335 - 923769 - | putative aminotransferase TERM 1022 924535 - 924508 - H 86 -7.9 -4.63007 | gap 1, opp_overlap 924508 924510 TATAAGGAGAGAAAA TATCCGCAGATA ATTTG TA-CTGCGGATA TTGAGATATGAATTC TERM 1023 925781 - 925771 - g 82 -5.4 -5.15969 | overlap 925780 CGTGAATGGAAAAAA CGTA AAC TACG CGAACATGGCGTCAA dsdA 925174 - 926505 + | D-serine dehydratase TERM 1024 926515 - 926552 + F 100 -14.3 -3.60627 | opp_overlap 926527, overlap 926516 926527 ATTTAATTTTTACCC TGCACAGAAAAGGCGCA AATT TGCACTTTTTCTGTGCG TTTAGCCTGCACTGA TERM 1025 926516 - 926551 + F 100 -15.6 -2.76162 | opp_overlap 926527, overlap 926515 926527 TTTAATTTTTACCCT GCACAGAAAAGGCGCA AATT TGCACTTTTTCTGTGC GTTTAGCCTGCACTG TERM 1026 927282 - 927272 - g 79 -3.2 -5.252 | overlap 927279 GAGTTTGATAAAAAA CTGA AAG CCAG CGGTAAGCCGGGCAT YE0801 926771 - 927628 + | ABC transporter, solute-binding component YE0802 927640 - 928299 + | ABC transporter, inner-membrane component TERM 1027 928474 - 928499 + G 73 -3.3 -4.96468 | gap 1 GGCTGATTCGCGGTA CACC-TTATCTG GCA CAGCTAGCGGTG TTTTATTTCGGTTTA YE0803 928296 - 928934 + | ABC transporter, inner-membrane component TERM 1028 929345 - 929335 - g 73 -2.4 -5.03145 | GAAGCGCGCAAAAAA GCGG CCG CGGC ATTGGCTCAGGTCGG YE0804 928936 - 929751 + | ABC transporter, ATP-binding component TERM 1029 930307 - 930321 + G 76 -7 -4.42788 | ACCGCGCCGTGCGCC GCTGCC GAT GGCCGC TTTTGTCGAATTGCA YE0805 929744 - 931027 + | putative amino acid hydrolase TERM 1030 931190 - 931214 + G 79 -10.1 -3.72695 | opp_overlap 931181, overlap 931193 931194 TATCAACACGCCCGG TAGTCAGGTGT GTG ACACCTGGTTA TTTAATAGCGCCGAT TERM 1031 931193 - 931211 + G 81 -9.6 -4.00042 | opp_overlap 931181, overlap 931190 931194 CAACACGCCCGGTAG TCAGGTGT GTG ACACCTGG TTATTTAATAGCGCC TERM 1032 931194 - 931210 + G 74 -10.9 -2.99704 | opp_overlap 931181, overlap 931193 931190 AACACGCCCGGTAGT CAGGTGT GTG ACACCTG GTTATTTAATAGCGC YE0806 931098 - 931694 + | hypothetical protein YE0807 931780 - 932370 + | putative transcriptional regulatory protein TERM 1033 932553 - 932590 + T 72 -7.7 -3.88291 | opp_overlap 932557, overlap 932557 GCATTCTGGTCAATA AAAAGCCGCCATTGGAA CTTC TTCCAGTAGCGGCTTGG TTTGTAACACTAATA TERM 1034 932557 - 932586 + T 100 -12.9 -3.60798 | opp_overlap 932557, overlap 932553 TCTGGTCAATAAAAA GCCGCCATTGGAA CTTC TTCCAGTAGCGGC TTGGTTTGTAACACT TERM 1035 932586 - 932557 - T 100 -12.9 -5.06414 | opp_overlap 932557 932553 TCTGGTCAATAAAAA GCCGCCATTGGAA CTTC TTCCAGTAGCGGC TTGGTTTGTAACACT fusA 934721 - 932613 - | elongation factor G TERM 1036 932921 - 932953 + g 75 -7.8 -4.18762 | gap 1, overlap 932913 932911 CCGGTGAGGCGCGTT TGGCGGCT-TCTTTG AAAC CAAAGATGGCGGCCA TTTTAAATGCCAATT YE0809 935067 - 935414 + | ArsR family transcriptional regulator sorE 936705 - 935455 - | L-sorbose 1-phosphate reductase TERM 1037 935976 - 935994 + g 82 -10.4 -3.93038 | opp_overlap 935980, overlap 935980 GGGCCATTAAACGTT CAAACTGA TCA TCAGTTTG TTTAGTATTGAGATA TERM 1038 935980 - 935990 + g 73 -5.4 -4.56883 | opp_overlap 935980, overlap 935976 CATTAAACGTTCAAA CTGA TCA TCAG TTTGTTTAGTATTGA sorM 937623 - 936793 - | sorbose-specific PTS uptake system, component sorA 938462 - 937635 - | sorbose-specific PTS uptake system component TERM 1039 938458 - 938479 + g 85 -12.3 -3.37056 | opp_overlap 938457 938456 938452 TTTGGACAATACACT CCCATGGCT ACAT AGCCGTGGG TTATAACTAAATAGT sorB 939065 - 938574 - | sorbose-specific PTS uptake system component sorF 939484 - 939062 - | sorbose-specific PTS uptake system component TERM 1040 939553 - 939574 + r 73 -7.3 -4.18303 | overlap 939555 TGTTGTGGTGAGCTA TTTGGGGAA ATGC TTCCCCATA TTTATAATTTATACT TERM 1041 939555 - 939572 + r 80 -9.9 -3.67823 | overlap 939553 TTGTGGTGAGCTATT TGGGGAA ATGC TTCCCCA TATTTATAATTTATA YE0815 940542 - 939583 - | transcriptional regulatory protein TERM 1042 940887 - 940865 - R 100 -12.1 -5.78622 | opp_overlap 940863 GCAGTGTAAAAAAAA GCCCTGATA TTAAT TATCAGGGC CGGTTTCACTCAGTT TERM 1043 940905 - 940923 + r 70 -6 -4.35742 | overlap 940907 GTTTCACTCAGTTTA TTTAACCG CAG CGGTTACA TTTTGATGCTTGGAT fumA 942549 - 940906 - | fumarate hydratase, class I TERM 1044 941142 - 941113 - G 71 -9.3 -3.58726 | gap 1, opp_overlap 941102 941113 941117 GCTGCCCAGATAGAA GCCGCCG-TGCTTG TGG CAAGCATCGGTGAC TTGCTGGCTGCGGTT TERM 1045 942182 - 942198 + g 81 -3.6 -5.40474 | overlap 942178 942184 GCATCATTCCCGCCG GTCCAG ACGCG CTGGCC TTTTTTTCCCACGAT TERM 1046 942740 - 942763 + H 72 -9.6 -3.09823 | overlap 942724 942736 942725 GTGCGAGGCGATGGC TCCACCCTCT TTAT AAAGGGTGGA TCTCATTTTCCGCAC TERM 1047 942954 - 942972 + H 77 -4.6 -4.93661 | opp_overlap 942954 TCGCTAGAGAATATA TCCATATT AAT AAGATGGA TTTTGTTATTGATAT TERM 1048 943283 - 943326 + H 73 -5.4 -4.61633 | gap 1, overlap 943281 943284 943286 943288 943320 CCCTTAGCTTTTGGC CTATGCCTTGGCAT-TGTCAA ATT TTGACTTATGCCAAGGTGTGA TTTTTCCACCTCTAT TERM 1049 943284 - 943325 + H 71 -8.9 -3.36256 | gap 1, overlap 943281 943283 943286 943288 943320 CCTTAGCTTTTGGCC TATGCCTTGGCAT-TGTCAA ATT TTGACTTATGCCAAGGTGTG ATTTTTCCACCTCTA TERM 1050 943286 - 943323 + H 74 -9.3 -3.24422 | gap 1, overlap 943281 943284 943283 943288 943320 TTAGCTTTTGGCCTA TGCCTTGGCAT-TGTCAA ATT TTGACTTATGCCAAGGTG TGATTTTTCCACCTC TERM 1051 943288 - 943321 + H 86 -11.9 -3.18031 | gap 1, overlap 943281 943286 943284 943283 943320 AGCTTTTGGCCTATG CCTTGGCAT-TGTCAA ATT TTGACTTATGCCAAGG TGTGATTTTTCCACC TERM 1052 944342 - 944330 - g 80 -9.1 -4.2243 | ATAAATATCTGAAAA CCGGT GCC ACCGG GCAAGAAGAAAAACA TERM 1053 944369 - 944356 - g 76 -2.4 -5.29445 | GGGCAAGAAGAAAAA CAGT TGATGG ACTG CGTATTGATTGATGA YE0818 943453 - 944427 + | putative sugar ABC transporter, periplasmic protein YE0819 944506 - 945120 + | putative lipoprotein TERM 1054 946182 - 946168 - g 87 -5.6 -5.46629 | opp_overlap 946168 AAGATCGCAAAAAAA CCGGTA TTT TCCCGG TGTCATCGGTGGCTA YE0820 945120 - 946643 + | putative sugar ABC transporter, ATP-binding protein rbsC 946640 - 947758 + | putative sugar ABC transporter, permease protein YE0822 948034 - 948864 + | putative N-terminal region of transketolase YE0823 948857 - 949801 + | C-terminal region of transketolase TERM 1055 951264 - 951275 + G 71 -7.2 -4.07885 | CTGGCAAACGGCCAT CGCG CGTG CGCG TTTTCAGCCGAAATA YE0824 949804 - 951291 + | glycerol kinase TERM 1056 952074 - 952059 - g 77 -2.6 -5.19328 | gap 1, opp_overlap 952072 ATTCCACAAGAAAAA TTGCACA AAA TG-GCAA AACTGTTTGTGGTTA YE0825 951312 - 952733 + | hypothetical protein YE0826 953773 - 952829 - | putative transcriptional regulatory protein TERM 1057 953945 - 953962 + r 84 -9.9 -3.90729 | ACTATTGCTGCTGAG GCTCATC TTCC GATGAGC TTTCTACCGATTCTT YE0827 955259 - 953931 - | hypothetical protein TERM 1058 955283 - 955297 + H 72 -10 -2.74563 | CCTAAGTTCATCATG CCGGTA AAT TACCGG TACTTCAGATGTCGC YE0828 955495 - 955983 + | competence damage-inducible protein A TERM 1059 957051 - 957033 - g 93 -8.8 -5.10933 | opp_overlap 957033 CTACTTAAAAGAAAA CCCAGCAG TTG CCGCTGAG TTGGATAAAAAATTG recA 956095 - 957159 + | recombinase A TERM 1060 957227 - 957205 - f 78 -9.1 -3.86776 | opp_overlap 957205 TAAGCAATTAGCAAA CGGCTCACT TAATC AGTGGGCCG TTTTAGTTAATGATG TERM 1061 957205 - 957227 + F 100 -11.3 -4.46615 | opp_overlap 957205 TAAGCAATTAGCAAA CGGCTCACT TAATC AGTGGGCCG TTTTAGTTAATGATG tnpA 957461 - 957793 + | IS1329 transposase A TERM 1062 957832 - 957856 + F 72 -7.8 -3.80133 | overlap 957846 ATCCAACAGGTATGC CGCTGCTTGT CGCTC ACGCGCAGCG TGTTTTATGCCCGTA TERM 1063 957846 - 957858 + F 86 -9.1 -4.3898 | overlap 957832 CCGCTGCTTGTCGCT CACGC GCA GCGTG TTTTATGCCCGTAGT TERM 1064 958284 - 958261 - g 85 -10.3 -4.03234 | GCCTTCTCAGACAAA CCGGACAGC GACTTG ACTGTCCGG GCCTTAAGGCTGGCC TERM 1065 958329 - 958309 - g 83 -8.9 -4.41348 | opp_overlap 958311 958316, overlap 958311 CTGGCCGTAAATAAA CGCCGACCC ACA GGGTCAGTG GTGTTCCATAGCGAT TERM 1066 958528 - 958548 + G 71 -4.7 -4.50976 | CAGGGTATCGCTGAT GTTATCGAT TAT ATCGACAGC TTTTATAATCTGAAA tnpB 957883 - 958632 + | IS1329 transposase B recX 958842 - 959345 + | recombination regulator RecX TERM 1067 959982 - 959966 - g 78 -10.9 -3.30124 | TCGCATTGGTGATAA CAAAGGC AGT GCCTTTG CATCAGATAACTTCT TERM 1068 961052 - 961028 - g 80 -7.1 -4.62336 | overlap 961029 AGGCGAGCTGAAAAA TGCGACTGCAA CCT TTGCAGTGGCT GACACTCAGAAATAT TERM 1069 961051 - 961029 - g 75 -10.6 -3.3692 | overlap 961028 GGCGAGCTGAAAAAT GCGACTGCAA CCT TTGCAGTGGC TGACACTCAGAAATA alaS 959487 - 962114 + | alanyl-tRNA synthetase TERM 1070 962141 - 962167 + F 82 -6.6 -4.88222 | CCCCTTAAATCAATG CGCCATATCT CTATGTT GGGTATGGCG TTTTTCAGTTTTCCT csrA 962368 - 962553 + | carbon storage regulator TERM 1071 962558 - 962592 + F 100 -15 -2.86806 | opp_overlap 962564, overlap 962555 CGACTTACTGATTTT GAAGAAGCGTCTCGTG TTA CACGAGGCGCTACTGC TGCTTATCCCTTCGT TERM 1072 962586 - 962564 - f 100 -13.4 -3.63694 | opp_overlap 962558 962555 ACTGATTTTGAAGAA GCGTCTCGTG TTA CACGAGGCGC TACTGCTGCTTATCC TERM 1073 963240 - 963255 + F 100 -8.2 -4.98672 | opp_overlap 963240 CACCATCTTAAGAAA CCTCGC TACG GCGGGG TTTTCTGTTTTTAGA TERM 1074 963343 - 963328 - f 73 -9 -3.52102 | overlap 963342 AGCGTAGCGAGACAA CGTTGC TTTA GCAACG GCCCGCAGGGCGAGG TERM 1075 963400 - 963415 + F 100 -8.2 -4.98672 | opp_overlap 963400 CACCATCTTAAGAAA CCTCGC TACG GCGGGG TTTTCTGTTTTTAGA TERM 1076 963503 - 963488 - f 73 -9 -3.52102 | overlap 963502 AGCGTAGCGAGACAA CGTTGC TTTA GCAACG GCCCGCAGGGCGAGG TERM 1077 963560 - 963575 + F 91 -8.2 -4.67635 | opp_overlap 963560, overlap 963570 963570 CACCATCTTAAGAAA CCTCGC TACG GCGGGG TTTTCTGCTTTTAAG yqaB 963796 - 964362 + | fructose-1-phosphatase TERM 1078 964576 - 964566 - g 74 -6.8 -4.42238 | TTACCGGAACTAAAA CCAC AAC GTGG GATGAGTACAGCTCT yqaA 964359 - 964787 + | hypothetical protein b2688 964870 - 966429 + | glutamate--cysteine ligase TERM 1079 966455 - 966438 - f 100 -11.3 -5.42605 | CCAATAAAAAGAAAA GGCCACA TTGC TGTGGCC AAATTAACATCTCTG luxS 966596 - 967111 + | S-ribosylhomocysteinase TERM 1080 967172 - 967156 - T 81 -5.1 -5.24449 | opp_overlap 967149 967156, overlap 967148 GATAAATGCAAAAAA GACGC TGAAAAG GCGTC TTTTTTATTCCCTTG TERM 1081 967156 - 967172 + T 90 -5.8 -5.5074 | opp_overlap 967156 967148, overlap 967149 GATAAATGCAAAAAA GACGCT GAAAA GGCGTC TTTTTTATTCCCTTG b2612/b2613 968478 - 967198 - | hypothetical protein TERM 1082 967555 - 967572 + g 87 -5.5 -5.47159 | AATATCACCATACTC GTCGACA ATCA TGCCGAC TTTTTCTTTATTGCG TERM 1083 968522 - 968502 - R 73 -7.5 -4.14945 | opp_overlap 968502 TTAATAACAATGAAA GCCCTGTGG ATT CAACAAGGC TATGTGTGGATGATT corE 969339 - 968548 - | hypothetical protein TERM 1084 969026 - 968973 - G 74 -6.6 -4.4773 | gap 1, opp_overlap 969019 969020, overlap 969020 CGATATGAACGAAAA TGGCCGGGCTGGCTTCCAGATGGGT AATGA ACTCACCAGGGAGC-AGACTGGCCA GTGCCAGATTGATCA TERM 1085 969196 - 969183 - G 75 -5.3 -4.8048 | CGCCGACATCAAAAA TCTGA TGCT TCAGA GCGATAGCATGGCAC TERM 1086 969965 - 969953 - g 74 -9.1 -3.62518 | opp_overlap 969953 TCAAACAGTTGGAAA CCCTG GCT CAGGG TGTTGGCATTGATTT TERM 1087 970026 - 970006 - g 71 -4 -4.81551 | opp_overlap 970007, overlap 970007 GATGTACAGGAAAAA CCGATTGA TATCG TCAATCGT GCTCTACAGCAGGCG TERM 1088 970813 - 970800 - g 77 -3.8 -5.17786 | GAAGAAAATGAAAAA TGGC GGTCTG GCCA AAATGATGCGTGGCA ffh 969505 - 970866 + | signal recognition particle protein TERM 1089 971061 - 971038 - f 76 -9.6 -3.4582 | overlap 971036 TGATGTGAGTAAAGA TTTCCCGCTG AAAA CAGCGGTAAA CGAAGAAAATTGTGC TERM 1090 971162 - 971195 + F 100 -18.3 -4.67982 | GGGCTTTTTATATTG CAACTGGACCCCGTT CCCC GATGGGGTCCAGTTG TTTTATTAACTAAAG rpsP 971219 - 971467 + | 30S ribosomal protein S16 rimM 971489 - 972037 + | 16S rRNA-processing protein trmD 972076 - 972816 + | tRNA (guanine-N(1)-)-methyltransferase rplS 972897 - 973259 + | 50S ribosomal protein L19 TERM 1091 973300 - 973322 + T 100 -13.5 -5.5353 | opp_overlap 973300 973292 GTTAATAGTTATGAA GGGGTTAGC CATGT GCTAACCCC TTTTTTATTCCTATA TERM 1092 973322 - 973300 - T 100 -13.5 -3.2218 | opp_overlap 973300, overlap 973292 GTTAATAGTTATGAA GGGGTTAGC CATGT GCTAACCCC TTTTTTATTCCTATA ydiY 974234 - 973467 - | hypothetical protein TERM 1093 974456 - 974419 - R 74 -4.3 -5.00611 | gap 1, opp_overlap 974427, overlap 974428 TACAAACAAAAGAAA TAAATGAAAGGGCCAGAA TTG CTCTGACCC-CTAATTTA GTACTTACCCGTTTT TERM 1094 974448 - 974428 - R 93 -9.7 -4.30977 | opp_overlap 974427, overlap 974419 AAGAAATAAATGAAA GGGCCAGAA TTG CTCTGACCC CTAATTTAGTACTTA YE0848 975814 - 974471 - | anaerobic C4-dicarboxylate transporter YE0849 976873 - 976157 - | putative two-component response-regulatory protein YehT aroF 977108 - 978187 + | phospho-2-dehydro-3-deoxyheptonate aldolase tyrA 978190 - 979311 + | bifunctional chorismate mutase/prephenate dehydrogenase TERM 1095 979342 - 979366 + T 100 -12.2 -4.93696 | opp_overlap 979342 TGCCTGTTTCAAAAA GTCATCCCGA CAGTA TCGGGGTGAC TTTTTGCTATTTAAA TERM 1096 979366 - 979342 - T 100 -10.7 -4.56597 | opp_overlap 979342 TGCCTGTTTCAAAAA GTCATCCCGAC AGT ATCGGGGTGAC TTTTTGCTATTTAAA TERM 1097 979559 - 979538 - T 95 -13.1 -3.15544 | overlap 979523 GCTCATCGGGATTAA TGAGCCTCA TCCT TGAGGCTCA CCCTGCGGGCTAGCA TERM 1098 979586 - 979608 + T 93 -13.6 -2.78712 | opp_overlap 979590, overlap 979590 AGCATAAATGCTGTT CAAATCGGTT CCC AACCGATTTG TCATTCGCTTGCCGC TERM 1099 979590 - 979604 + T 79 -8.6 -4.07975 | opp_overlap 979590, overlap 979586 TAAATGCTGTTCAAA TCGGTT CCC AACCGA TTTGTCATTCGCTTG TERM 1100 979604 - 979590 - T 71 -8.6 -3.54935 | opp_overlap 979590 979586 TAAATGCTGTTCAAA TCGGTT CCC AACCGA TTTGTCATTCGCTTG pheA 980828 - 979671 - | bifunctional chorismate mutase/prephenate dehydratase TERM 1101 981002 - 981019 + r 100 -12.7 -4.51224 | opp_overlap 981002 TTATGCATAAAAAAA GCCTCCC GCTT GGGAGGC TTTGTTGTTCGTCTT TERM 1102 981019 - 981002 - R 100 -12.7 -5.64274 | opp_overlap 981002 TTATGCATAAAAAAA GCCTCCC GCTT GGGAGGC TTTGTTGTTCGTCTT TERM 1103 981234 - 981219 - R 78 -2.4 -5.4505 | opp_overlap 981219, overlap 981220 GCTGTCAATAAAAAA CGCGCC CAAA GGTGCA TTGGATATACCACAA int 982318 - 981320 - | integrase TERM 1104 982379 - 982367 - R 73 -3.5 -4.946 | ATGAAATATCAAAAA TATAA ACT TTATA GATACTTAACCAATC CI 982684 - 982385 - | bacteriophage CI repressor protein cox 982793 - 983149 + | bacteriophage regulatory protein YE0856 983146 - 983388 + | phage-like protein TERM 1105 983384 - 983429 + F 79 -7 -4.67607 | opp_overlap 983379 983378 983390 983391 TGTATGAAATGAGGG GATAAAGCCCTCCCTCAAAT AAAGCA ATTTGCGAAAGGGTTTTATC TTTATTTATTAGCAG YE0857 983455 - 983820 + | phage-like protein YE0857A 983849 - 984070 + | phage-like protein YE0858 984079 - 984429 + | phage-like protein YE0859 984491 - 984736 + | phage-like protein TERM 1106 985190 - 985166 - g 71 -2.8 -4.90266 | gap 1, opp_overlap 985168, overlap 985167 985168 CCCATCAATTAAAAA TCCTGCCTGAA TATT TCCAGGC-GGT TATTGATGGCAGAAA YE0860 984736 - 985404 + | putative exported phage-related protein YE0860A 985388 - 985768 + | phage-like protein TERM 1107 985812 - 985840 + G 85 -11.1 -3.93038 | gap 1, opp_overlap 985808 CCCGTCACAACCTTA CCCCGG-AAACG ATAAAA CGTTTGCCGGGG TTTACTCTTGGAATA TERM 1108 986097 - 986086 - g 100 -5.8 -5.63103 | GTTGAATCAAAAAAA GCTG AACG CAGC TACCCCGCTTTAGAG TERM 1109 987902 - 987878 - g 81 -10.8 -3.727 | gap 1, opp_overlap 987872 987867 987873 GCGACGACAGCCAAA CCAA-GGCCAC CCCT GTGGCCGTTGG GGTTGACGTTGGTTT TERM 1110 988147 - 988121 - g 100 -12.3 -5.49729 | AACCACCGAAAAAAA TTGAGGCGCAG CCTAT CAGCGCCTCAA TGGTGGAAATGTGCC TERM 1111 988231 - 988210 - g 70 -2.3 -4.95155 | gap 1 TGGATATTAGAAAAA TGGCAAATCA GCG TG-TTAGCCA GGGGCGGCAATCTGG gpA 985765 - 988350 + | phage replication protein (endonuclease) TERM 1112 988542 - 988509 - g 72 -10.9 -2.56596 | overlap 988493 CTGCCGAGCAATTCA CGCCGGGCAGGCC CTTATTTT AGCCCGCGCGGCG ATACGTGGGCTGGCG YE0862 988354 - 988602 + | phage-like protein TERM 1113 989535 - 989553 + G 85 -4.6 -5.38054 | AACTATACTCATAGC TGCAATTA ATT TAATAGCA TTTTTCTTTATAAAG YE0863 988741 - 989850 + | phage-like membrane protein YE0864 989892 - 990536 + | phage-like membrane protein TERM 1114 990565 - 990580 + T 100 -11.8 -4.29304 | opp_overlap 990565 TTTTCAATAAAAAAA CCCGCC GTTC GGCGGG TTTCTCTTATCCTGG TERM 1115 990580 - 990565 - T 100 -11.8 -5.7946 | opp_overlap 990565 TTTTCAATAAAAAAA CCCGCC GTTC GGCGGG TTTCTCTTATCCTGG YE0865 990916 - 990587 - | phage-like protein gpQ 992017 - 990920 - | putative portal vertex protein gpP 993875 - 991698 - | terminase, ATPase subunit TERM 1116 993553 - 993565 + gH 74 -2.7 -5.13473 | opp_overlap 993553 GCCGCCGCCTCTAAA TTCAT GGC GTGAA TTTTTTCAGTGTGCT TERM 1117 994938 - 994928 - g 71 -4 -4.82901 | TGCCGCTGATAAAAA GTTT AAC AAAC TTGAACAAGTCACCA gpO 994053 - 995009 + | capsid scaffolding protein gpN 995092 - 996258 + | major capsid protein precursor TERM 1118 996351 - 996327 - g 78 -12.1 -2.65942 | overlap 996326 996324 GCCAGAGCGAAAGAG CGGCGTACTCC CCC GGAGCAAGCCG AGCCAGATGTGGGTG TERM 1119 996414 - 996402 - g 73 -5.5 -4.58395 | opp_overlap 996402 CTCAGCTTGGAAAAA GACGT TAA ACGCC TGGGTTCACTAACCC TERM 1120 996459 - 996447 - g 76 -9.1 -3.79419 | overlap 996445 GTTGCCGACAAAATA GCGCT AAA AGCGC AGGAGTTGTTACCCA gpM 996273 - 996926 + | terminase, endonuclease subunit gpL 997060 - 997512 + | head completion/stabilization protein YE0871A 997509 - 998045 + | phage-like protein YE0872 998035 - 998730 + | phage-like protein TERM 1121 999219 - 999229 + G 74 -6.8 -4.37658 | overlap 999212 GGCATGAGCTGGTCA GCCT ACC AGGC TTTTATGGCCGAGTT YE0873 998727 - 999905 + | putative tail sheath protein YE0874 999907 - 1000365 + | putative tail tube protein YE0875 1000369 - 1000689 + | putative phage holin YE0876 1000686 - 1001027 + | phage-like protein YE0877 1001027 - 1001398 + | phage-like protein YE0878 1001513 - 1001788 + | phage-like protein TERM 1122 1002390 - 1002370 - g 70 -9.7 -3.14051 | opp_overlap 1002388 1002389, overlap 1002368 CCACGGCGATTAATA CTCTGGCGG TCG CCACCAAAG GCAGCGCCGAGGGTG TERM 1123 1002410 - 1002390 - g 79 -10.3 -3.72576 | opp_overlap 1002389 1002388 1002408, overlap 1002368 GCGGTCGCCACCAAA GGCAGCGCC GAG GGTGCCGCC AATTATATGGCTGAT TERM 1124 1002979 - 1002952 - g 85 -4.8 -5.42259 | TGATGGCGAAAAAAA TGGCCGACATGT GGGA ACGTGTCGATCA GGTGTGGAAACGTAT TERM 1125 1003854 - 1003867 + G 76 -9.5 -3.76224 | opp_overlap 1003846 GCACCAACGGCATTA CCCGC GCCG GCGGG TTTAGTGAGTCCAGC YE0879 1001985 - 1004042 + | phage-like protein YE0880 1004039 - 1004365 + | phage-like protein YE0881 1004365 - 1005549 + | phage-like protein TERM 1126 1005736 - 1005754 + G 79 -10.2 -3.67597 | overlap 1005737 TGATGTAACACAGTT TGCCGGCG AAC CGCTGGCG TTATTCCGTAAACGG TERM 1127 1005737 - 1005753 + G 76 -11.5 -2.80344 | overlap 1005736 GATGTAACACAGTTT GCCGGCG AAC CGCTGGC GTTATTCCGTAAACG YE0882 1005542 - 1006165 + | phage-like protein TERM 1128 1006521 - 1006506 - g 80 -4.6 -5.15634 | overlap 1006507 CATTGCAGCAAAAAA TCGCCA CCAC TGGCGG TGTACAGGGCAACAA TERM 1129 1006684 - 1006707 + G 74 -3.9 -4.99035 | gap 1, overlap 1006681 TTATGACTATTACGG CCATGCGGCA TTTTT TGCTG-ATGG TTTTTCTGTCAGTAA YE0883 1006175 - 1007719 + | tail fiber protein YE0884 1007719 - 1008357 + | putative tail fiber assembly protein TERM 1130 1008514 - 1008487 - g 70 -7.6 -3.92522 | overlap 1008491 GGCCAATGCGATAAA TGCACTCGCCAG CCGG CTGGCTGGCGCA GAAAGTAATCAAGAT TERM 1131 1008515 - 1008491 - g 78 -12.2 -2.71097 | gap 1, overlap 1008487 AATGCGATAAATGCA CT-CGCCAGCC GGCT GGCTGGCGCAG AAAGTAATCAAGATG TERM 1132 1008992 - 1008973 - g 73 -10 -3.3095 | AGATATTCCCGACAA CCAGGCCA TTTT TAGCCTGG CAATTATGTTTGTGG YE0885 1008347 - 1009054 + | phage-like protein YE0886 1009056 - 1009601 + | phage-like protein YE0887 1009598 - 1011295 + | phage-like protein YE0888 1011378 - 1011797 + | phage-like membrane protein TERM 1133 1011795 - 1011844 + T 100 -14.3 -3.19463 | opp_overlap 1011800, overlap 1011796 AACTGGCTCAACAGA TAGAAGCCTCTGGAGCATAGACA ATCA TGTCTGTGCTCCAGAGGCCCCCC TTAATCAGTAATAAA TERM 1134 1011796 - 1011843 + T 100 -17.8 -2.51464 | opp_overlap 1011800, overlap 1011795 ACTGGCTCAACAGAT AGAAGCCTCTGGAGCATAGACA ATCA TGTCTGTGCTCCAGAGGCCCCC CTTAATCAGTAATAA TERM 1135 1011839 - 1011800 - T 100 -23.8 -3.68962 | opp_overlap 1011796 1011795 GCTCAACAGATAGAA GCCTCTGGAGCATAGACA ATCA TGTCTGTGCTCCAGAGGC CCCCCTTAATCAGTA TERM 1136 1012535 - 1012518 - T 79 -8.3 -4.23486 | opp_overlap 1012517 1012518, overlap 1012515 1012519 AATCAGGCAAAACAA GGCCCCG CAAG CGGGGCG GTTTTACTCAGAGTG TERM 1137 1012534 - 1012519 - T 86 -11.8 -3.13007 | opp_overlap 1012518 1012517, overlap 1012518 1012515 ATCAGGCAAAACAAG GCCCCG CAAG CGGGGC GGTTTTACTCAGAGT TERM 1138 1012629 - 1012614 - T 100 -11.8 -5.59655 | opp_overlap 1012614 TAAATCAATAAAAAA CGCGCC CAAA GGCGCG TTAGATCCGAAATGA TERM 1139 1012614 - 1012629 + T 86 -11.8 -3.05816 | opp_overlap 1012614 TAAATCAATAAAAAA CGCGCC CAAA GGCGCG TTAGATCCGAAATGA yfiA 1013022 - 1012660 - | putative sigma 54 modulation protein TERM 1140 1013343 - 1013326 - R 100 -12.7 -4.29176 | opp_overlap 1013326 AGACGGAATTGAAAA CGGCAGC CTAA GCTGCCG TTTGTTATTTTATCG TERM 1141 1013326 - 1013343 + r 100 -12.7 -4.72617 | opp_overlap 1013326 AGACGGAATTGAAAA CGGCAGC CTAA GCTGCCG TTTGTTATTTTATCG yfiO 1014121 - 1013390 - | outer membrane protein assembly complex subunit YfiO TERM 1142 1014222 - 1014212 - H 75 -8.2 -3.8766 | GCACATTATATTAAA CGGC ATC GCCG TCAAAACCCAACGTT rluD 1014257 - 1015234 + | 23S rRNA pseudouridine synthase D TERM 1143 1015600 - 1015621 + G 71 -9.4 -3.61103 | overlap 1015610 GATGAAGTAGCTGCC GCCCATGC GGGCTG GCGTGGGC TTTGCGCTGGCGTTC YE0892 1015234 - 1015965 + | hypothetical protein clpB 1016096 - 1018669 + | protein disaggregation chaperone TERM 1144 1018684 - 1018703 + T 100 -11.4 -5.70761 | ATGGTAAATCCTTGA GGGGGCGA GAAA TCGTCCCC TTTTTGTTTTCTTTT TERM 1145 1020907 - 1020887 - T 100 -11.3 -4.9725 | opp_overlap 1020885 ACCTTTACACAAAAA TACTGAATC CAT GATTCAGTA GAAATTTTTGTGTCC TERM 1146 1021047 - 1021084 + T 83 -10.9 -3.45839 | opp_overlap 1021047 1021046, overlap 1021029 TTATGAACTCAAAAG TATCTTAAAGATGACTT TAAC AAGTCGTGTTTAAGATA TTGCTCTTTAACAAT TERM 1147 1022752 - 1022734 - T 82 -10.3 -3.57798 | overlap 1022747 CATAAGTAACGATAA TGCGGGT GAAAA ACCCGCA CGCCGGAAGACCAAG TERM 1148 1023259 - 1023248 - T 74 -4.4 -5.06816 | ACTGTTTAATAAAAA CACA GCAC TGTG CAAACACGAAAGTGG TERM 1149 1024371 - 1024381 + T 74 -6.8 -4.35524 | opp_overlap 1024371 GGCTTAACCTTACAA CACC AAA GGTG TTTTGAATTTGAGAG TERM 1150 1024833 - 1024811 - T 100 -16.4 -4.14739 | opp_overlap 1024811 CCACTTATTGCAAAA CCCCTGAATC ATC GATTCAGGGG TTTTTTGCATTTTAA TERM 1151 1024811 - 1024833 + T 100 -16.4 -5.2696 | opp_overlap 1024811 CCACTTATTGCAAAA CCCCTGAATC ATC GATTCAGGGG TTTTTTGCATTTTAA TERM 1152 1024999 - 1024989 - T 70 -5.4 -4.44548 | CACAGCGAATGAAAA GTCA TGG TGAC TAAGTGTGATTAAAG TERM 1153 1025059 - 1025043 - T 95 -12.3 -3.32844 | opp_overlap 1025043 1025058 TGGGGGAGTGTATAA GCCCTCA ATC TGAGGGC TTCGTACTAAGCTGA TERM 1154 1025043 - 1025059 + T 93 -12.3 -3.21747 | opp_overlap 1025043, overlap 1025058 TGGGGGAGTGTATAA GCCCTCA ATC TGAGGGC TTCGTACTAAGCTGA YE0894 1026175 - 1025066 - | putative O-methyltransferase TERM 1155 1025198 - 1025187 - G 85 -7.2 -4.87665 | overlap 1025188 TCTGAGTGATAAAAA CGGC TATT GCCG TTAGCCATGCATGTA YE0895 1026620 - 1026234 - | putative lipoprotein TERM 1156 1026593 - 1026604 + g 74 -4.4 -4.84363 | overlap 1026596 CGAGAGATACAAACC CGAT TAAA ATCG TTTTTAATAATTTCA YE0896 1027008 - 1027724 + | hypothetical protein TERM 1157 1027793 - 1027803 + G 73 -3.2 -4.90869 | overlap 1027796 CGTTCATGGCGAGTT GTTG CAA CAGC TTTTTGCTTCATGCT YE0897 1027712 - 1028539 + | putative acyltransferase YE0898 1028539 - 1028796 + | putative acyl carrier protein TERM 1158 1028847 - 1028860 + G 70 -2.3 -4.89233 | TCAGCAGGTTACATC GCTCC TGGT GAAGC TTTTTGATATTAATG YE0899 1028812 - 1029063 + | putative acyl carrier protein TERM 1159 1029470 - 1029482 + G 70 -7.7 -3.85698 | overlap 1029468 GAGCCTGAATTGTCA CCACA AGG TGTGG TTTATACCCGAAAAG YE0900 1029077 - 1029667 + | putative inner membrane protein TERM 1160 1030537 - 1030551 + G 74 -4.2 -4.83615 | opp_overlap 1030537, overlap 1030533 CAACAGTTAGAGCAA CTGCAA CCG TGGCAG TTTTTCTCAGGGGTA YE0901 1029667 - 1031028 + | putative AMP-binding protein YE0902 1031025 - 1031372 + | putative dehydratase YE0903 1031363 - 1033129 + | putative bifunctional glycosyl transferase/acyl transferase YE0904 1033098 - 1033559 + | putative thioesterase YE0905 1033556 - 1034161 + | putative outer-membrane lipoprotein carrier protein TERM 1161 1035264 - 1035276 + G 71 -4.8 -4.65895 | CCTTTCCCCGGATTA CAGC AATTG GCTG TTTTTGCCTCCGCAG TERM 1162 1036399 - 1036414 + G 81 -3.2 -5.4505 | GCATTGTGCTGAGCA GTGGTG TATT TACCGC TTTTTTATTAGCGCC YE0906 1034151 - 1036466 + | putative inner membrane protein YE0907 1036463 - 1037035 + | putative lipoprotein YE0908 1037041 - 1038216 + | 3-oxoacyl-(acyl carrier protein) synthase I YE0909 1038213 - 1038677 + | putative dehydratase TERM 1163 1038733 - 1038750 + G 80 -4.1 -5.19212 | overlap 1038734 GCGAGCTATTGCTCT TCGTCTG GCAG CAGATGG TTTTTTAGTAGTAGT fabG 1038674 - 1039405 + | 3-ketoacyl-(acyl-carrier-protein) reductase fabF 1039402 - 1040649 + | 3-oxoacyl-(acyl carrier protein) synthase II dkgB 1040870 - 1041673 + | 2,5-diketo-D-gluconate reductase B TERM 1164 1041778 - 1041796 + T 76 -8.1 -4.17048 | opp_overlap 1041778 AGGTAGAAGAGTAAA GCGTCCG CGCCA CGGATGC TTGTTTTAACAAAGA TERM 1165 1041881 - 1041893 + T 93 -9.1 -4.51238 | opp_overlap 1041878, overlap 1041876 TAACCTCAATCACCC CCACC GGA GGTGG TTTCTATTTTGTCGG YE0914 1042799 - 1041897 - | LysR family transcriptional regulator TERM 1166 1041959 - 1041949 - G 77 -4.6 -4.90918 | ATAAAATCAATAAAA CAGC GCA GCCG ATTGCTGACAGCCTG TERM 1167 1044127 - 1044147 + H 100 -9.7 -5.5112 | AGATTTTCGTTTTCA GCCCGCA TATAGAT TGCGGGC TTTTTTGTTCATAGA TERM 1168 1044804 - 1044816 + G 74 -6.3 -4.36262 | opp_overlap 1044804 TGATGGTTGTGAACA TTCAC GCA GTGAA TTTTAGTCTGGGTGT YE0917 1044344 - 1045126 + | hypothetical protein TERM 1169 1045132 - 1045147 + T 100 -10.4 -4.58283 | opp_overlap 1045132, overlap 1045143 CCAGCCATAAAAAAA GCACCC CGAA GGGTGC TTTTTAGCAGCGTTA TERM 1170 1045147 - 1045132 - T 100 -10.4 -5.64274 | opp_overlap 1045132 1045143 CCAGCCATAAAAAAA GCACCC CGAA GGGTGC TTTTTAGCAGCGTTA dniR 1046608 - 1045178 - | membrane-bound lytic murein transglycosylase D TERM 1171 1046311 - 1046333 + g 73 -9.8 -3.37245 | overlap 1046306 TTTGCTTCTGTTCAC GGATCCGGGA ATT TTCCGGAACC TTCATCTTCAGCTCG gloB 1047396 - 1046641 - | putative hydroxyacylglutathione hydrolase TERM 1172 1046694 - 1046714 + g 79 -2.5 -5.38958 | CTGAGACAAGTGAGT TAGGTGGAG ATA TTACGCCTA TTTTTCTTTGTAAAT TERM 1173 1048019 - 1047995 - g 73 -7.8 -4.06419 | CCGTGGCATAAAGAA GGTGGGCGCT TTATC AGCACCCATC TGCCGGCGTTGGGGT YE0920 1047443 - 1048162 + | hypothetical protein rnhA 1048654 - 1048190 - | ribonuclease H TERM 1174 1048369 - 1048393 + g 80 -4.9 -5.11033 | opp_overlap 1048359, overlap 1048361 1048370 CATTACGCACCGGTT TGCGGTCGG TGGTTTT CCAACCGCG TTTTTTCCAGTTATG TERM 1175 1049105 - 1049117 + G 71 -6.3 -4.24342 | CGGAAACCTTCTGTA CTATC ACC GATAG TTTGTTGCTGGCACG dnaQ 1048780 - 1049496 + | DNA polymerase III subunit epsilon TERM 1176 1049737 - 1049712 - T 100 -16.3 -3.42503 | opp_overlap 1049705 1049712 CGCCAACATTCAGAA GCCCTGAGTTA TTGC TAACTCAGGGC TTTGTTGTATCTATA TERM 1177 1049712 - 1049737 + T 100 -16.3 -4.4458 | opp_overlap 1049712, overlap 1049705 CGCCAACATTCAGAA GCCCTGAGTTA TTGC TAACTCAGGGC TTTGTTGTATCTATA proX 1050958 - 1049954 - | glycine betaine transporter periplasmic subunit proW 1052295 - 1051114 - | glycine betaine transporter membrane protein proV 1053487 - 1052288 - | glycine betaine/L-proline transport ATP-binding protein TERM 1178 1053759 - 1053791 + r 100 -13.8 -3.76884 | opp_overlap 1053761, overlap 1053753 TGTAAATAGTGTGAA TATTGCACATATAT AGGAA ATATATGTGCAATA TTATTGATAATGTAT TERM 1179 1053789 - 1053761 - R 86 -12 -3.07029 | opp_overlap 1053753 1053759 TAAATAGTGTGAATA TTGCACATATAT AGGAA ATATATGTGCAA TATTATTGATAATGT TERM 1180 1053922 - 1053941 + r 70 -7.8 -3.65812 | overlap 1053926 1053933 TGCCCTGGTCGCCAG CGAGGGGG AGTT CCCCTTTG TTATATTAGCGAAAA TERM 1181 1053926 - 1053937 + r 78 -7.2 -4.46073 | overlap 1053922 1053933 CTGGTCGCCAGCGAG GGGG AGTT CCCC TTTGTTATATTAGCG nrdF 1054953 - 1053982 - | ribonucleotide-diphosphate reductase subunit beta TERM 1182 1055063 - 1055041 - R 83 -11.4 -3.05769 | opp_overlap 1055045, overlap 1055045 1055056 GCGGCAAAGGAGATA CAAATCGGTC AGT AACCGATTTG AACGGCATTTATGCT TERM 1183 1055090 - 1055111 + r 95 -13.1 -3.15544 | overlap 1055107 TGCTAGCCCGTAGGG TGAGCCTCA AGGA TGAGGCTCA TTCATCCCGATGAGC nrdE 1057295 - 1055214 - | ribonucleotide-diphosphate reductase subunit alpha nrdI 1057750 - 1057346 - | ribonucleotide reductase stimulatory protein nrdH 1058000 - 1057764 - | putative glutaredoxin TERM 1184 1058219 - 1058195 - R 72 -9.2 -3.1479 | opp_overlap 1058194, overlap 1058188 ACAATTCAGAGGCAA GGCCGCCAGC ACGGG GCTGGCGACA GATTCTATACATAAT YE0930 1058714 - 1058283 - | hypothetical protein TERM 1185 1059277 - 1059292 + G 78 -11.8 -3.05715 | CGGGCATCCTCCCGC CGCCGG ATTA CCGGCG TTACGTGAGGCAATT TERM 1186 1060114 - 1060100 - g 82 -11.4 -3.28712 | GCTGCGCGGGCACAA CGCCAG GGG CTGGCG ATTGAGGCGGTATCA YE0931 1058810 - 1060264 + | GntR family transcriptional regulator TERM 1187 1060337 - 1060306 - T 100 -10.2 -4.82901 | gap 1, overlap 1060308 1060327 TTGGCGTTATAAAAA CATGGCCCGCAGTGA ATA TCACT-CGGGCCACC GATAAGCAAACAGCA TERM 1188 1060335 - 1060308 - T 100 -15 -4.03995 | gap 1, overlap 1060306 1060327 GGCGTTATAAAAACA TGGCCCGCAGTGA ATA TCACT-CGGGCCA CCGATAAGCAAACAG YE0932 1060720 - 1060412 - | putative inner membrane protein TERM 1189 1060908 - 1060887 - H 95 -13.1 -3.15663 | ACTCATCGGGATTAA TGAGCCTCA TCCT TGAGGCTCA CCTTACGGGCTAGCA TERM 1190 1060935 - 1060957 + H 95 -11.4 -3.77832 | opp_overlap 1060939 1060940, overlap 1060939 AGCATGAATGCTGTT CAAATCGGTT CCC GACCGATTTG TTATTCGCTTTCCGC TERM 1191 1060939 - 1060953 + H 74 -6.4 -4.49364 | opp_overlap 1060939 1060940, overlap 1060935 TGAATGCTGTTCAAA TCGGTT CCC GACCGA TTTGTTATTCGCTTT TERM 1192 1061283 - 1061273 - g 83 -6.8 -4.84359 | CCAGCTGTAGAAAAA GCTG CAC CAGC TAAAGCAACTCATCA asr 1061138 - 1061536 + | acid shock protein precursor TERM 1193 1061586 - 1061609 + T 100 -11 -5.626 | opp_overlap 1061590 GTCTAGCCAATTCCA GACACCCGTT TAAT ATCGGGTGTC TTTTTTTATAGGCTA YE0934 1062835 - 1061732 - | hypothetical protein YE0935 1062927 - 1063934 + | AraC family transcription regulator YE0937 1064607 - 1064942 + | hypothetical protein yicN 1065442 - 1064993 - | hypothetical protein TERM 1194 1065237 - 1065217 - G 70 -2.5 -4.96848 | overlap 1065218 TTTGGTAGATAAAAA CCAGATAAG CTG CCTTTCTGA CATCTTCAGCATAGC YE0939 1065871 - 1065533 - | hypothetical protein cspB 1066253 - 1066465 + | cold shock-like protein cspG TERM 1195 1066478 - 1066510 + T 71 -9.4 -2.93715 | gap 1, opp_overlap 1066481 1066486, overlap 1066486 TAATTTATACAGTCA TAAGAAAACCTCGCT ATAG AGCGGGGTTTT-TTA CTTTCTACGGCTTAT TERM 1196 1066503 - 1066486 - T 82 -6.9 -4.79955 | opp_overlap 1066478 1066486, overlap 1066481 ACAGTCATAAGAAAA CCTCGCT ATAG AGCGGGG TTTTTTACTTTCTAC TERM 1197 1066486 - 1066503 + T 100 -9.1 -5.42514 | opp_overlap 1066486 1066481, overlap 1066478 ACAGTCATAAGAAAA CCTCGCT ATAG AGCGGGG TTTTTTACTTTCTAC ftrA 1067513 - 1066554 - | transcriptional activator FtrA YE0942 1067634 - 1068071 + | putative rhodanese-like protein TERM 1198 1069659 - 1069672 + G 73 -2.3 -5.09762 | ACCTTGCTGACAGCC GCTCT ATTA AGTGC TTTTTCTGTTCCAGT YE0946 1069617 - 1071200 + | putative solute-binding protein TERM 1199 1071235 - 1071264 + G 74 -10.7 -2.77043 | overlap 1071234 TACCCTGCGTTTAGT TTGCCTGCTGCTG GTCA CGGCAGTAGGCAC CTTTACGCTACTGAG YE0947 1071200 - 1072168 + | hypothetical protein TERM 1200 1072335 - 1072353 + G 71 -8.8 -3.6422 | overlap 1072333 CACTGACAGTTTAGG GCGTGACC TGT GGTTGCGC TGTTTTCAGGGAATG TERM 1201 1072806 - 1072828 + G 80 -7.1 -4.63932 | gap 1 AGGGTTCGGGTTGTC TCCCC-ATGA ACCG TCATTGGGGA TTTTATTGGCCGATG YE0948 1072165 - 1072971 + | binding-protein-dependent transport protein YE0949 1072971 - 1073777 + | putative transport ATPase YE0950 1073770 - 1074435 + | putative transport ATPase TERM 1202 1074855 - 1074866 + F 71 -3 -5.00923 | CTCCTGAAATCTATT TCAA CTAA TTGA TTTTATTTGATATTT ureA 1075582 - 1075884 + | urease subunit gamma ureB 1075938 - 1076432 + | urease subunit beta ureC 1076597 - 1078315 + | urease subunit alpha ureE 1078489 - 1079181 + | urease accessory protein UreE ureF 1079203 - 1079889 + | urease accessory protein ureG 1080067 - 1080672 + | urease accessory protein TERM 1203 1081275 - 1081290 + G 85 -4.6 -5.47218 | GATGTTTATTCCTCC CGAGTG GCGG CACACG TTTTTTTGGGTAAAG ureD 1080669 - 1081652 + | urease accessory protein TERM 1204 1081877 - 1081901 + G 80 -4.3 -5.252 | opp_overlap 1081880 TCAAGTCATGTTCCA GAATAACCC TCTGACC GGGCTATTC TTTTTTATCGCAATA YE0958 1081767 - 1082756 + | putative urea transporter YE0959 1082780 - 1083838 + | putative nickel transport protein TERM 1205 1083883 - 1083855 - T 100 -10.4 -4.40804 | opp_overlap 1083861, overlap 1083861 TATTATTCTATAAAA TAAAAAGGCGCT GATTA AGCGCCTTTTTC ATAAGGTAAATATTT TERM 1206 1083861 - 1083877 + T 100 -9.4 -4.7373 | opp_overlap 1083855 1083861 TCTATAAAATAAAAA GGCGCT GATTA AGCGCC TTTTTCATAAGGTAA TERM 1207 1083877 - 1083861 - T 100 -9.4 -5.54907 | opp_overlap 1083861, overlap 1083855 TCTATAAAATAAAAA GGCGCT GATTA AGCGCC TTTTTCATAAGGTAA hdeB 1084236 - 1083904 - | acid-resistance protein YE0961 1084592 - 1085767 + | voltage-gated potassium channel TERM 1208 1085819 - 1085801 - T 100 -11 -5.08178 | opp_overlap 1085804 AGATATACATAAAAA CACCCTCA TGA CGAGGGTG TGAGGTTAATGACAA YE0962 1086008 - 1085778 - | hypothetical protein TERM 1209 1085963 - 1085981 + g 100 -10.3 -5.31456 | TTGTCAGCAGTCTGA CACCCTC ATGAC GAGGGTG TTTTTTATACCTTAA ccrB 1086417 - 1086013 - | camphor resistance protein CrcB YE0964 1086867 - 1086487 - | hypothetical protein YE0965 1087056 - 1088090 + | aldo-keto reductase TERM 1210 1088144 - 1088127 - T 100 -8.4 -5.56673 | AGTGATAATAAAAAA GCCGGA ATATTA TCCGGC TGAGGTTAATGACAA TERM 1211 1088295 - 1088312 + T 100 -8.4 -5.27938 | overlap 1088290 TTGTCAGCAGTCTGA GCCGGA ATATTA TCCGGC TTTTTCTTTGGAAAT YE0966 1089505 - 1088342 - | hypothetical protein TERM 1212 1089726 - 1089739 + H 70 -5.3 -4.4891 | TAATTTATTCTTTTA TCGAT TTCA ATCGA TTTTATCGTAGTGCC celA 1090080 - 1090397 + | N,N'-diacetylchitobiose-specific PTS system transporter subunit IIB celB 1090408 - 1091769 + | N,N'-diacetylchitobiose-specific PTS system transporter subunit IIC YE0969 1091808 - 1093193 + | putative glycosyl hydrolase celC 1093222 - 1093569 + | N,N'-diacetylchitobiose-specific PTS system transporter subunit IIA TERM 1213 1093953 - 1093967 + G 87 -6.4 -5.16038 | overlap 1093940 GGCTTCGCAGGCTTA TCGCCT GAA AGGTGA TTTTCTTTCTTATAT celD 1093621 - 1094451 + | DNA-binding transcriptional regulator ChbR YE0972 1094500 - 1095261 + | hypothetical protein TERM 1214 1095309 - 1095283 - T 70 -7.9 -3.6682 | opp_overlap 1095284 1095287, overlap 1095284 1095287 TTGTATGTAGTTAAA TTCAGCCCACC ACCAA GGTGGGCTGCT GTGGTCAATATCGTT TERM 1215 1095284 - 1095308 + T 81 -11.4 -2.82193 | opp_overlap 1095283 1095284 1095287, overlap 1095287 TGTATGTAGTTAAAT TCAGCCCACC ACCAA GGTGGGCTGC TGTGGTCAATATCGT TERM 1216 1095308 - 1095284 - T 81 -11.4 -2.79878 | opp_overlap 1095284 1095287, overlap 1095283 1095287 TGTATGTAGTTAAAT TCAGCCCACC ACCAA GGTGGGCTGC TGTGGTCAATATCGT TERM 1217 1095287 - 1095305 + T 80 -11.7 -2.67143 | opp_overlap 1095284 1095283 1095287, overlap 1095284 ATGTAGTTAAATTCA GCCCACC ACCAA GGTGGGC TGCTGTGGTCAATAT TERM 1218 1095305 - 1095287 - T 80 -11.7 -2.66451 | opp_overlap 1095287 1095284, overlap 1095284 1095283 ATGTAGTTAAATTCA GCCCACC ACCAA GGTGGGC TGCTGTGGTCAATAT YE0973 1096774 - 1095323 - | putative membrane transport protein TERM 1219 1097161 - 1097187 + H 72 -9.3 -3.20227 | opp_overlap 1097161, overlap 1097159 TACAGACACAAAAAA GCCCGCAAACC TAGGT GGAATGCGGGC TCTTCGTACTTCACC TERM 1220 1097187 - 1097161 - H 100 -9.3 -5.4492 | opp_overlap 1097161 1097159 TACAGACACAAAAAA GCCCGCAAACC TAGGT GGAATGCGGGC TCTTCGTACTTCACC TERM 1221 1097557 - 1097528 - g 71 -4.3 -4.72272 | TGTTTTGATGAAAAA TTGGTCTCCTGAG CATA CTAAGGAAATCAA AACTTGGCTCGACAT TERM 1222 1098363 - 1098332 - g 87 -6.8 -5.1287 | gap 1, opp_overlap 1098335 1098337 1098339, overlap 1098335 TCCACACCTAAAAAA CATGAGAGTTTCA GATGTGA TGAAACTCTC-TG ATTCCAACTAATCGT TERM 1223 1098361 - 1098335 - g 70 -9.6 -3.10444 | opp_overlap 1098335 1098337 1098339, overlap 1098332 ACACCTAAAAAACAT GAGAGTTTCA GATGTGA TGAAACTCTC TGATTCCAACTAATC YE0975 1097520 - 1098374 + | hypothetical protein YE0975A 1098498 - 1098698 + | hypothetical protein YE0976 1098715 - 1099029 + | hypothetical protein TERM 1224 1099482 - 1099500 + G 71 -10.4 -2.90573 | overlap 1099481 1099484 CAATCGCAGGTATTT TAGCTATG TTA CATAGCTA CTTTGCTATAAATAA YE0977 1099313 - 1100518 + | putative integrase/recombinase YE0978 1100515 - 1101873 + | putative integrase/recombinase YE0979 1101870 - 1103729 + | DNA-binding protein YE0980 1103765 - 1104169 + | hypothetical protein TERM 1225 1104276 - 1104255 - f 77 -4.5 -4.93296 | opp_overlap 1104259, overlap 1104259 TCAGGATGATAAAAA TAACTTGCA AGGA TGCAATTTA TGGATAATAAAAAGA YE0981 1104276 - 1104698 + | hypothetical protein YE0982 1105136 - 1104747 - | putative lipoprotein YE0983 1105807 - 1105166 - | hypothetical protein YE0984 1107299 - 1106028 - | repetative plasmid-related protein YE0986 1107732 - 1107316 - | putative ATP/GTP-binding protein TERM 1226 1107918 - 1107874 - R 70 -5.8 -4.39386 | gap 2, opp_overlap 1107874 1107908 CTGAAAGGAGGAAAA GCAAGG-C-AACTCAGAGAAGC GGA GCTTCGGAGAGTTAGCCCTTGC TGAATTATGATGAAG YE0987 1108765 - 1108214 - | putative inner membrane protein YE0988 1110333 - 1108807 - | hypothetical protein TERM 1227 1110641 - 1110625 - g 73 -4.5 -4.70534 | GAAAGATACATAAAA TTTCTTG AGC CAAAAAA GGTTTTAACATCACC YE0989 1110505 - 1110981 + | hypothetical protein TERM 1228 1111028 - 1110985 - T 75 -10.4 -2.75382 | opp_overlap 1110982 1110993 1111019, overlap 1110973 1110982 CATCGTAGCTAATCA GCTATGGAGGCACTATAAAT AGAA ACTTATAGAGCCTCCTTAGA GAGGTTTTTTAGATT TERM 1229 1111019 - 1111032 + T 80 -3.8 -5.30575 | opp_overlap 1110985 1110982, overlap 1110993 1110982 TAGAAACTTATAGAG CCTC CTTAGA GAGG TTTTTTAGATTTTTC YE0990 1112893 - 1111058 - | AYP/GTP-binding protein TERM 1230 1111391 - 1111365 - G 75 -6.1 -4.65916 | gap 1, opp_overlap 1111372, overlap 1111369 TGGAGTGCAAGAAAA TAAGCTACATGT ACAT ACATGTAG-TTA GAGGCACTCCCTATA TERM 1231 1111486 - 1111519 + g 71 -6.9 -4.29391 | gap 1, opp_overlap 1111491, overlap 1111473 1111505 TTGGAGTTGCATCCT CAAATCCTTTAAGAGG CAT CCT-TGAAAGGGTTTG TTTAATTTTGTCATT TERM 1232 1111725 - 1111738 + g 77 -3.1 -5.26875 | opp_overlap 1111733 GTTATGTTTTCATTA CTGAG CAAG CTTAG TTTTTTACTTAGCAA TERM 1233 1111952 - 1111963 + g 85 -3 -5.53436 | TAATGAGTCTTGGTT TTCT TTCA AGAA TTTTTTATATTCTGT YE0991 1113297 - 1112875 - | hypothetical protein YE0992 1114508 - 1113318 - | hypothetical protein TERM 1234 1114063 - 1114074 + g 71 -3 -4.98436 | opp_overlap 1114063, overlap 1114057 ATATATTTGTAAAGA TCAT CATT ATGA TTTTTGTGCTCTTGA TERM 1235 1114424 - 1114446 + g 78 -5.6 -4.86033 | opp_overlap 1114423 1114424, overlap 1114425 TTAGAGCAACATAAT CTTGATAGGT AAA ACCTATCGAA TTTTTATCGGCATTT TERM 1236 1114425 - 1114445 + g 71 -9.1 -3.50535 | opp_overlap 1114424 1114423, overlap 1114424 TAGAGCAACATAATC TTGATAGGT AAA ACCTATCGA ATTTTTATCGGCATT TERM 1237 1114673 - 1114691 + r 73 -8.2 -3.5882 | opp_overlap 1114673 TATAGCTACTAAGCA TTCTGATG TAA CATCGGAA TTTAAAAATGATATA TERM 1238 1114738 - 1114749 + r 70 -5.8 -4.258 | TACGGGCAATTTCAA GCCA TCCC TGGC TTTCTTGCTAACTCC YE0993 1116003 - 1114774 - | putative prophage integrase TERM 1239 1114876 - 1114887 + g 77 -4.4 -5.0538 | ACGATTATACGCTGC GATG ATTT CATC TTTTTTCGAGTGGGC TERM 1240 1116132 - 1116107 - R 90 -7.4 -5.14477 | opp_overlap 1116107 TATAGACGTAAAAAA GCCCGCAAGG CTGGTT CCAAGCGGGC TTAGTAGACTTTACT TERM 1241 1116445 - 1116461 + r 73 -3.7 -4.96028 | overlap 1116437 AGCAGCAGATTCGTA TTGCGAG TCG TTTGCAA TTATTTTTTTTGCGG smpB 1117080 - 1116598 - | SsrA-binding protein YE0995 1117241 - 1117675 + | hypothetical protein TERM 1242 1117676 - 1117717 + F 75 -8.9 -3.72678 | overlap 1117710 GTCTACAGTGTCTGA TATTCGCGTTGAGGTAG TTTATGCC CTACCTGAACGCCAATA TTTGCGTACTGTTTC YE0996 1117719 - 1117952 + | hypothetical protein TERM 1243 1117979 - 1117941 - T 84 -11.2 -3.61715 | opp_overlap 1117950, overlap 1117950 CAGCGCGCTGAACAA GCAAAAAAATAAGGCACA GTT TGCGCCTTATTTTTGTGG TAGCTCTGGACTGCG TERM 1244 1117950 - 1117970 + T 100 -8.3 -4.9218 | opp_overlap 1117941 1117950 GAACAAGCAAAAAAA TAAGGCACA GTT TGCGCCTTA TTTTTGTGGTAGCTC TERM 1245 1117970 - 1117950 - T 100 -10.5 -5.71638 | opp_overlap 1117950, overlap 1117941 GAACAAGCAAAAAAA TAAGGCACA GTT TGCGCCTTA TTTTTGTGGTAGCTC YE0997 1118455 - 1118105 - | hypothetical protein YE0998 1120239 - 1118560 - | recombination and repair protein ppnK 1121189 - 1120308 - | inorganic polyphosphate/ATP-NAD kinase YE1000 1121313 - 1121891 + | heat shock protein GrpE TERM 1246 1121927 - 1121910 - f 71 -8.4 -3.57144 | opp_overlap 1121910 GTCCTGATGTGGAAA GGCACC TTTGCG GGTGCC TTTTTTGTTGTGCAC TERM 1247 1121910 - 1121927 + F 100 -9.1 -5.55769 | opp_overlap 1121910 GTCCTGATGTGGAAA GGCACCT TTGC GGGTGCC TTTTTTGTTGTGCAC TERM 1248 1121967 - 1121949 - f 100 -14.6 -4.52589 | opp_overlap 1121949 1121960 GTTGTGCACAGAAAA CCTCCAGC TAG GCTGGAGG TTCCGTAAAGCTTTC TERM 1249 1121949 - 1121967 + F 100 -14.6 -3.07307 | opp_overlap 1121949, overlap 1121960 GTTGTGCACAGAAAA CCTCCAGC TAG GCTGGAGG TTCCGTAAAGCTTTC tnp 1122080 - 1122538 + | transposase for IS1541 TERM 1250 1122608 - 1122598 - T 71 -6.8 -4.15044 | GCGGCTGGTAACAAA GCCT TAC AGGC GCATATGAAAAACCT TERM 1251 1122614 - 1122646 + T 100 -11.3 -5.18371 | opp_overlap 1122621, overlap 1122620 1122621 CCTTACAGGCGCATA TGAAAAACCTCCGGC TAT GCCGGAGGATATTTA TTTTGTTTTCTGCAG TERM 1252 1122620 - 1122640 + T 100 -12.5 -4.10507 | opp_overlap 1122621, overlap 1122614 1122621 AGGCGCATATGAAAA ACCTCCGGC TAT GCCGGAGGA TATTTATTTTGTTTT TERM 1253 1122639 - 1122621 - T 100 -16 -4.8048 | opp_overlap 1122620 1122614 1122621 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTTTGTTT TERM 1254 1122621 - 1122639 + T 100 -16 -3.02644 | opp_overlap 1122621, overlap 1122620 1122614 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTTTGTTT ung 1123359 - 1122673 - | uracil-DNA glycosylase TERM 1255 1122785 - 1122773 - G 78 -6.2 -4.70169 | TTACAGCCAAGAAAA CCGC GATGT GCGG AGAGCGGTGATGGAT YE1003 1123711 - 1124094 + | autonomous glycyl radical cofactor GrcA TERM 1256 1124129 - 1124147 + T 100 -11.7 -5.5353 | GTCTCAAATTCTGAA GGGAGCC TCTGT GGCTCCC TTTTTTGTTCCTGTG YE1004 1124305 - 1124180 - | hypothetical protein yplA 1124315 - 1125289 + | phospholipase A yplB 1125378 - 1126034 + | putative phospholipase A accessory protein TERM 1257 1126150 - 1126132 - T 100 -7.4 -5.82036 | ATAACAAATAAAAAA GCCGCT GTTTATA AGCGGC TTCAGACTGCTGACA TERM 1258 1126240 - 1126214 - T 72 -7.2 -3.9749 | gap 1, overlap 1126215 1126230 AGGTAGAAGAGTAAA GCGTCCGCGCC AAGGAG GGCGCGG-CTC GAGCCCCCAGAGAGG TERM 1259 1126323 - 1126338 + T 79 -3.2 -5.252 | opp_overlap 1126321, overlap 1126321 CATTAACCTCAAACC GCTGTT TATA AGCGGC TTTTTTGTCAGGGTG rbaB 1127684 - 1126359 - | ATP-dependent RNA helicase SrmB YE1008 1127808 - 1128563 + | hypothetical protein nadB 1130328 - 1128691 - | L-aspartate oxidase rpoE 1130517 - 1131092 + | RNA polymerase sigma factor RpoE mclA 1131117 - 1131773 + | anti-RNA polymerase sigma factor SigE TERM 1260 1132283 - 1132268 - g 77 -4.7 -4.85918 | overlap 1132260 GATGAGACAACAAAA CTACC GATGCG GGTAG ATCTGTTGGATCGTG rseB 1131773 - 1132729 + | periplasmic negative regulator of sigmaE rseC 1132726 - 1133187 + | SoxR reducing system protein RseC YE1014 1134038 - 1133202 - | hypothetical protein TERM 1261 1134414 - 1134401 - H 73 -3.9 -5.01497 | ACGACTAGAGAAAAA TTCAT ATAA ATGAA GCACATAAGAAACTT lepA 1134410 - 1136209 + | GTP-binding protein LepA lepB 1136219 - 1137217 + | lsignal peptidase I rnc 1137463 - 1138143 + | ribonuclease III TERM 1262 1138385 - 1138356 - g 75 -3.5 -5.12068 | overlap 1138379 CATATTGAAGAAAAA CGTGCGATTAACC GCTT AATGAATCGCGCG GCAAGTAGCTCTATC era 1138140 - 1139051 + | GTP-binding protein Era TERM 1263 1139215 - 1139202 - g 75 -8.1 -4.27316 | opp_overlap 1139202 CGTTCCAACCTAAAA GGCTG CTTG CAGCC TTTTACACCCTTACT TERM 1264 1139202 - 1139215 + G 73 -8.1 -4.11751 | opp_overlap 1139202 CGTTCCAACCTAAAA GGCTG CTTG CAGCC TTTTACACCCTTACT recO 1139061 - 1139786 + | DNA repair protein RecO pdxJ 1139955 - 1140686 + | pyridoxal phosphate biosynthetic protein PdxJ acpS 1140686 - 1141066 + | 4'-phosphopantetheinyl transferase YE1022 1141105 - 1141263 + | hypothetical protein TERM 1265 1141265 - 1141288 + F 100 -11 -5.08088 | CTAATCGATCTTAAG GGGGTGGCAT GAAA ATGCCGCTCC TTTTTGTTGCCCATT gntP 1141652 - 1142995 + | fructuronate transporter TERM 1266 1143046 - 1143017 - T 89 -12.3 -2.79796 | opp_overlap 1143020 TTTGAGTTGATTATA TTATCAGTGCTTC AGTG GAGGCACTGATAA TTCAGCTATAAAAAT TERM 1267 1143020 - 1143043 + T 83 -11.8 -2.74563 | opp_overlap 1143017 GAGTTGATTATATTA TCAGTGCTTC AGTG GAGGCACTGA TAATTCAGCTATAAA fdx 1143321 - 1143061 - | putative [4Fe-4S] ferredoxin YE1025 1144225 - 1143383 - | putative DNA-binding transcriptional regulator TERM 1268 1144310 - 1144320 + r 85 -2.4 -5.75342 | AAGGGCCAAGTAAGG GAGC ATA GCAC TTTTTTTTGGCGAGA YE1026 1145104 - 1144382 - | LuxR family transcriptional regulator nlp 1145384 - 1145656 + | putative DNA-binding protein murQ 1145742 - 1146629 + | N-acetylmuramic acid-6-phosphate etherase TERM 1269 1146939 - 1146977 + G 73 -5.2 -4.51812 | overlap 1146940 CGTTATTGGCTTGGG ATTATTGGTCGGTGGGCG TTG TGCGCGCTGGCCAATGAG TTTGTTGTTGTGGGC yfhB 1146835 - 1147422 + | hypothetical protein TERM 1270 1147420 - 1147436 + T 72 -9.5 -3.09015 | opp_overlap 1147423, overlap 1147423 TTACAACAGTTGGAA TAAGCCA CCG TGGCTTA TTCGCTGCATCTCAC YE1029 1148500 - 1147451 - | putative integral membrane protein YE1030 1148739 - 1149224 + | tRNA-specific adenosine deaminase YE1031 1150848 - 1149388 - | putative transglycosylase TERM 1271 1149452 - 1149468 + g 81 -7.9 -4.60678 | overlap 1149451 AACTCGGCTTCAATC GCGGCGT GCT GCGCTGC TTTCTTCTCTTTTTC TERM 1272 1150676 - 1150655 - G 79 -10.1 -3.63805 | opp_overlap 1150657 AGCTCATAGTCGAAA CCGGAAGGG CCAT CCTTTCCGG TCGAGTAGATAAGCG TERM 1273 1154110 - 1154097 - g 71 -3.8 -4.70659 | opp_overlap 1154097 1154098, overlap 1154098 1154101 GTTTACAGTGAAAAA CGCA GCACCT TGCG CTTGTGGTGGGCTGA purI 1151163 - 1155053 + | phosphoribosylformylglycinamidine synthase TERM 1274 1155080 - 1155099 + T 100 -10 -4.87892 | opp_overlap 1155080 1155077 TTGAATATGACAGCA GGGGCATT GGAT GATGCCCC TTTCTTTTATTAGGC YE1033 1155572 - 1155126 - | hypothetical protein TERM 1275 1155430 - 1155441 + g 71 -3 -4.85653 | overlap 1155426 GTGGCGCTTTCTTCA TCAT GAAT ATGA TTTATTTTATCTATG TERM 1276 1156367 - 1156386 + G 91 -13.6 -3.35934 | opp_overlap 1156359 CCACATATTCTGCGA CGGGGCAA TTTA TTGCCCCG TTGTCACATCTATAC YE1034 1156224 - 1156562 + | hypothetical protein TERM 1277 1156569 - 1156591 + F 100 -7.7 -6.23209 | opp_overlap 1156569 CAACCTTAATTAAAA GCACTTTGC TCAAC GCTAAGTGC TTTTTTTTTACTTCA TERM 1278 1156591 - 1156569 - f 82 -7.7 -4.43309 | opp_overlap 1156569 CAACCTTAATTAAAA GCACTTTGC TCAAC GCTAAGTGC TTTTTTTTTACTTCA TERM 1279 1157514 - 1157504 - g 70 -2.4 -4.90266 | CCCATGAATTAAAAA CGCC GCT GGCC AGTATGCGCGAAGGT YE1035 1156693 - 1158144 + | two-component system sensor kinase TERM 1280 1158899 - 1158889 - gf 75 -8.2 -3.83502 | GATGCTGACAGCAAA GCCG CTG CGGC CCTCAAGCCAGCAGA YE1036 1158229 - 1159230 + | hypothetical protein YE1037 1159193 - 1160530 + | two-component system response regulator TERM 1281 1160639 - 1160618 - f 95 -13.1 -3.15663 | ACTCATTGGGACTAA TGAGCCTCA TCCT TGAGGCTCA CCCTGCGGGCTAGCA TERM 1282 1160666 - 1160688 + F 83 -11.4 -2.95884 | opp_overlap 1160670 1160671, overlap 1160670 AGCATAAATGCTGTT CAAATCGGTT CCC GACCGATTTG TCTCTCAATTGCTGC TERM 1283 1161816 - 1161828 + G 70 -7.7 -3.83169 | overlap 1161818 ATTTGATGTGCTATC CATCG AAC CGATG TTTGATGCCTTTATG nadE 1160791 - 1162413 + | NAD synthetase glnB 1162428 - 1162766 + | nitrogen regulatory protein P-II 1 TERM 1284 1162796 - 1162820 + T 100 -10.8 -5.03314 | gap 1, opp_overlap 1162796 AGTCATCAATAAAAA GCCCGTTTCGT TTCC ACGAA-CGGGC TTTTTTACACCTAAA TERM 1285 1162820 - 1162796 - T 100 -10.8 -5.14163 | gap 1, opp_overlap 1162796 AGTCATCAATAAAAA GCCCGTTTCGT TTCC ACGAA-CGGGC TTTTTTACACCTAAA YE1040 1164262 - 1162967 - | putative integral membrane protein TERM 1286 1163124 - 1163112 - G 83 -9.1 -4.3586 | opp_overlap 1163111 1163110 GTAGTGATAGTAAAA CCGGT GTA ACCGG CCATTTTGATTGACG TERM 1287 1163636 - 1163652 + g 71 -6.5 -4.21462 | opp_overlap 1163627, overlap 1163637 AACAGAGTGCCCACC ACCACCT CCC AGGTGGG TTTTGGCTCGTAAAT TERM 1288 1163637 - 1163651 + g 70 -10 -3.12395 | opp_overlap 1163627, overlap 1163636 ACAGAGTGCCCACCA CCACCT CCC AGGTGG GTTTTGGCTCGTAAA YE1041 1164626 - 1164273 - | putative inner membrane protein YE1042 1165516 - 1164629 - | putative hydrolase YE1043 1166777 - 1165608 - | hypothetical protein YE1044 1167276 - 1166896 - | hypothetical protein YE1045 1168223 - 1167324 - | DNA-binding protein fsrB 1169677 - 1168487 - | nitric oxide dioxygenase TERM 1289 1170021 - 1170010 - H 70 -7.2 -3.86524 | ACACTGTGTCATAAA GCCC AAGA GGGC AGTCTACCAGGTCTA TERM 1290 1171069 - 1171044 - g 71 -3.9 -4.82901 | opp_overlap 1171044 1171060, overlap 1171047 1171060 TTTGGTCGACAAAAA CATCACCGGTA AAGA TGCCGATGCTG CTTTGGGGCGTGCCA TERM 1291 1171161 - 1171181 + G 71 -9 -3.53012 | gap 1, overlap 1171163 TGTGCGTATCGGTAG CC-CGGCGA TTAC TCGCCGTGG TTTCAAAGAAGAAGA TERM 1292 1171163 - 1171178 + G 71 -10.4 -2.90496 | overlap 1171161 TGCGTATCGGTAGCC CGGCGA TTAC TCGCCG TGGTTTCAAAGAAGA glyA 1170064 - 1171317 + | serine hydroxymethyltransferase TERM 1293 1171361 - 1171347 - f 100 -8.5 -5.06414 | CTTTTCTAATAAAAA CCCGC GAAAT GCGGG TTGAGGTTAATGACA TERM 1294 1171441 - 1171467 + F 74 -7.9 -3.9749 | gap 1, opp_overlap 1171416 1171413, overlap 1171450 CCTCCCTGGGGGCTC GAG-CCGCGCCG TCCG TGGCGCGGACGC TTTACTCTTCTACCT TERM 1295 1171450 - 1171466 + F 73 -10.1 -2.97771 | overlap 1171441 GGGCTCGAGCCGCGC CGTCCGT GGC GCGGACG CTTTACTCTTCTACC TERM 1296 1171531 - 1171545 + F 100 -9.2 -5.42265 | TGTCAGCAGTCTGAA CCCGCG AAA TGCGGG TTTTTTGTCATTTAC TERM 1297 1171967 - 1171980 + G 73 -2.3 -5.03145 | TGATGGTGATTATTG CCGGT TTTA ACCTG TTTTTTGGCCCATTA TERM 1298 1172269 - 1172286 + G 77 -4.7 -4.86133 | overlap 1172271 AAAGTGTTGCTAGCT GAGCCGC AGGT GTGGCGC TTTTTACTGTGTGTG hcaT 1171666 - 1172823 + | putative 3-phenylpropionic acid transporter YE1050 1174031 - 1172820 - | stationary phase inducible protein CsiE TERM 1299 1174629 - 1174599 - g 76 -2.1 -5.19879 | GGTGAAATATAAAAA TTTAC-CGACAGAAT ATC ATT-TGTCGCGCAAA GGCCATCAGGCGGTT YE1051 1174255 - 1174929 + | hypothetical protein TERM 1300 1175261 - 1175249 - g 71 -4.1 -4.74103 | opp_overlap 1175251, overlap 1175251 GGCGCAACTTAAAAA CAGTC TGA AACTG ACTTTTGCTGCGTCG YE1052 1174944 - 1175936 + | hypothetical protein TERM 1301 1175952 - 1175975 + T 100 -8.8 -5.36441 | opp_overlap 1175952 ATGAGCAATAAAAAA GCCAGTCAGT GTTA GCCGACTGGC TTTTTTGTATCAAAC TERM 1302 1175975 - 1175952 - T 100 -10.3 -5.52023 | opp_overlap 1175952 ATGAGCAATAAAAAA GCCAGTCAG TGTTAG CCGACTGGC TTTTTTGTATCAAAC suhB 1176938 - 1176132 - | inositol monophosphatase TERM 1303 1176345 - 1176334 - G 72 -5.8 -4.46233 | overlap 1176335 CCAATTTCAAAGAAA CCGT CAAC ACGG CCGGCGGCAACATAG YE1055 1177057 - 1177830 + | SpoU family rRNA methylase TERM 1304 1178155 - 1178142 - g 71 -3.8 -4.66163 | ACGGTTACGCAAAAA TGGC TTAGTG GCCA GCGTTCGTGGTCCAG YE1056 1177987 - 1178481 + | DNA-binding transcriptional regulator IscR iscS 1178535 - 1179764 + | putative aminotransferase nifU 1179795 - 1180181 + | scaffold protein TERM 1305 1180431 - 1180444 + G 77 -6.7 -4.56597 | opp_overlap 1180431 TGTTGATGAAATGAA CGATG ACGA CATCG TTTTTGAAGACAAAG iscA 1180285 - 1180608 + | iron-sulfur cluster assembly protein hscB 1180716 - 1181240 + | co-chaperone HscB TERM 1306 1181421 - 1181399 - f 89 -11.4 -3.46068 | opp_overlap 1181404 1181407, overlap 1181403 GCGGCAAGTGAAAGA CAAATCGGTC GGG AACCGATTTG AACAGCATTTATGCT TERM 1307 1181417 - 1181403 - f 72 -6.4 -4.3665 | opp_overlap 1181404 1181407, overlap 1181399 CAAGTGAAAGACAAA TCGGTC GGG AACCGA TTTGAACAGCATTTA TERM 1308 1181448 - 1181469 + F 95 -13.1 -3.15663 | TGCTAGCCCGCAGGG TGAGCCTCA AGGA TGAGGCTCA TTAGTCCCGATGAGT TERM 1309 1182082 - 1182105 + G 70 -9.6 -3.16619 | gap 1, opp_overlap 1182082 1182080, overlap 1182080 1182078 1182075 1182086 TCAGGGAACCAAAGA TGCAG-CCCGC TTA GCGGGGTTGCA TGTGTTGCGTTTGCT TERM 1310 1183361 - 1183392 + G 85 -11.6 -3.65827 | ACGCAAGATTTTGCC GCGCGCCGAATGGA TGCT TCTATTCGCCGTGC TTTGGCTGGCCATTC hscA 1181573 - 1183423 + | chaperone protein HscA fdx 1183426 - 1183761 + | ferredoxin TERM 1311 1183869 - 1183848 - f 95 -13.1 -3.15544 | overlap 1183833 GCTCATCGGGACTAA TGAGCCTCA TCCT TGAGGCTCA CCCTGCGGGCTAGCA TERM 1312 1183896 - 1183918 + F 89 -11.4 -3.46068 | opp_overlap 1183900 1183901, overlap 1183900 AGCATAAATGCTGTT CAAATCGGTT CCC GACCGATTTG TCTTTCACTTGCCGC TERM 1313 1183900 - 1183914 + F 72 -6.4 -4.3665 | opp_overlap 1183900 1183901, overlap 1183896 TAAATGCTGTTCAAA TCGGTT CCC GACCGA TTTGTCTTTCACTTG YE1063 1183980 - 1184180 + | hypothetical protein TERM 1314 1184189 - 1184206 + F 100 -10.5 -5.24531 | TGAATAAATACCTGA GGGTCGC ACGA GCGGCCC TTTTTTCTACCCGAT pepB 1184400 - 1185683 + | aminopeptidase B YE1065 1185919 - 1186743 + | enhanced serine sensitivity protein SseB YE1066 1186779 - 1191815 + | hypothetical protein TERM 1315 1191860 - 1191817 - f 80 -8.8 -3.9642 | opp_overlap 1191819, overlap 1191812 1191819 AAATAGTTAAGTAAA CACTTACTCCCCTTTTGCGG CGGT CAGCAAAGGGGGAGCCAGTT ACCTTTGATGCTAAA TERM 1316 1191858 - 1191819 - f 89 -11.4 -3.56006 | opp_overlap 1191819, overlap 1191812 1191817 ATAGTTAAGTAAACA CTTACTCCCCTTTTGCGG CGGT CAGCAAAGGGGGAGCCAG TTACCTTTGATGCTA TERM 1317 1191819 - 1191858 + F 86 -11.4 -3.31415 | opp_overlap 1191812 1191819 1191817 ATAGTTAAGTAAACA CTTACTCCCCTTTTGCGG CGGT CAGCAAAGGGGGAGCCAG TTACCTTTGATGCTA pbpC 1191865 - 1194204 + | penicillin-binding protein 1C YE1068 1194366 - 1196891 + | hypothetical protein ndk 1197185 - 1197610 + | nucleoside diphosphate kinase TERM 1318 1197715 - 1197754 + F 74 -7 -4.24413 | overlap 1197712 1197720 TTAAAATTTGTACAA TGCTGCGCCCCGGTGGAG ACAT CTCTGTCGGGGCGTTCTA TTATTTATTCATCGC TERM 1319 1197720 - 1197749 + F 100 -15.7 -3.96154 | overlap 1197715 1197712 ATTTGTACAATGCTG CGCCCCGGTGGAG ACAT CTCTGTCGGGGCG TTCTATTATTTATTC YE1070 1197838 - 1199034 + | hypothetical protein YE1071 1199229 - 1199978 + | putative fimbrial biogenesis protein TERM 1320 1200555 - 1200543 - g 80 -6.3 -4.7219 | TACACCAACAGAAAA TGGTA CTG TACCA GCGACGAGCAGTGCA yfgA 1200016 - 1200984 + | hypothetical protein TERM 1321 1201158 - 1201127 - g 75 -11.7 -2.73721 | opp_overlap 1201127 ACGAATCCCCAATTA TCCGCCGTAAATC GACGCG GATTTACGTCGGA AAAGTACCTATTGGC TERM 1322 1202189 - 1202173 - g 87 -10.9 -4.10855 | overlap 1202163 AAAATTCGTGCAAAA GCATCGA TGC TCGATGC AAATAATCGAATAGT ispG 1201105 - 1202229 + | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase TERM 1323 1202266 - 1202280 + F 100 -12.8 -3.96148 | opp_overlap 1202266 GTTGAATACAAAAAA GCGGGC ATG GCCCGC TTTATAATGAGCCAG TERM 1324 1202280 - 1202266 - f 100 -12.8 -5.47159 | opp_overlap 1202266 GTTGAATACAAAAAA GCGGGC ATG GCCCGC TTTATAATGAGCCAG TERM 1325 1202316 - 1202300 - f 77 -10.9 -2.8194 | opp_overlap 1202299 TAATGAGCCAGTAGA GGTGACA AAT TGTCACC ATTGAATATGTGGGC hisS 1202445 - 1203719 + | histidyl-tRNA synthetase TERM 1326 1204185 - 1204172 - g 71 -6.7 -4.24294 | ATGAAGCATTGAAAA CACTG GATG CAGTG CAAGGCGACGGCTGG yfgM 1203733 - 1204353 + | hypothetical protein yfgL 1204365 - 1205546 + | outer membrane protein assembly complex subunit YfgL TERM 1327 1205666 - 1205642 - f 80 -9.9 -3.58037 | opp_overlap 1205643, overlap 1205643 GAGGAAGGGTTCAAA GCGGCTCCTGA TAT TCAGGGGCCGT TTGTCTTCTAAAAAC TERM 1328 1205665 - 1205643 - f 93 -13.4 -2.74501 | opp_overlap 1205643, overlap 1205642 AGGAAGGGTTCAAAG CGGCTCCTGA TAT TCAGGGGCCG TTTGTCTTCTAAAAA TERM 1329 1205643 - 1205665 + F 100 -15.6 -4.27117 | opp_overlap 1205642 1205643 AGGAAGGGTTCAAAG CGGCTCCTGA TAT TCAGGGGCCG TTTGTCTTCTAAAAA engA 1205746 - 1207230 + | GTP-binding protein EngA TERM 1330 1207257 - 1207241 - f 78 -9.4 -3.69092 | opp_overlap 1207241 AATAGTAACTGCAAA GCGTGG GCATT CCACGC TTTTTGCACATTTAA TERM 1331 1207241 - 1207257 + F 100 -10.1 -4.64657 | opp_overlap 1207241 AATAGTAACTGCAAA GCGTGGG CAT TCCACGC TTTTTGCACATTTAA YE1078 1207339 - 1208295 + | hypothetical protein YE1079 1208324 - 1208548 + | hypothetical protein TERM 1332 1208593 - 1208622 + T 95 -7.8 -5.03145 | opp_overlap 1208590 1208586, overlap 1208590 GGCAATAATAACGGC GCTCAGTTAGCG GCTTTA CGCTGACGGGGC TTTTTTGCCACCTTG xseA 1209971 - 1208595 - | exodeoxyribonuclease VII large subunit TERM 1333 1209317 - 1209301 - G 78 -9.3 -3.98256 | opp_overlap 1209300, overlap 1209299 CTGCTATTAAAAATA GCGCGGG CAA CCCGCTC GTCATTAAAACTCCA TERM 1334 1209725 - 1209744 + g 74 -6.4 -4.36914 | opp_overlap 1209732, overlap 1209734 GGGTAATCGATGCTC TGACCAAC ACTT GTTGGCCA TTTTGTGGGCGAAAA guaB 1210140 - 1211603 + | inositol-5-monophosphate dehydrogenase guaA 1211788 - 1213365 + | bifunctional GMP synthase/glutamine amidotransferase protein TERM 1335 1213402 - 1213419 + F 100 -11.3 -5.82172 | opp_overlap 1213401 1213397 1213402 CTAATCTAAATGAAG CCTCCGA TATT TCGGAGG TTTTTTTATGTTGGT TERM 1336 1213419 - 1213402 - f 81 -11.3 -2.73781 | opp_overlap 1213402, overlap 1213401 1213397 CTAATCTAAATGAAG CCTCCGA TATT TCGGAGG TTTTTTTATGTTGGT TERM 1337 1214340 - 1214361 + G 87 -6.7 -5.01546 | gap 1, overlap 1214324 AAGGCACGGGCACAG CCTTG-TCAT TAG ATGAACAAGG TTTTTATGTGAATTT TERM 1338 1214878 - 1214889 + G 77 -3 -5.30155 | opp_overlap 1214878 GAATTTTCTAGCAGA TGAT CAAT ATCA TTTTTTAGTTAATGG YE1083 1213613 - 1215490 + | hypothetical protein TERM 1339 1215499 - 1215514 + F 72 -7.6 -3.85165 | opp_overlap 1215490 1215499, overlap 1215490 ATCATAGTTACAAAA TGTGAC TTGC GTCACA TTTAACTTTACCCTC TERM 1340 1215514 - 1215499 - f 82 -7.6 -4.45485 | opp_overlap 1215490 1215499, overlap 1215490 ATCATAGTTACAAAA TGTGAC TTGC GTCACA TTTAACTTTACCCTC YE1084 1215721 - 1216287 + | hypothetical protein YE1085 1216305 - 1217924 + | hypothetical protein TERM 1341 1218901 - 1218926 + G 78 -9.1 -4.11216 | gap 1 GGTGCGCGTTTGTAT CTG-GGCAATTG CGC CAGTTGCCACAG TTTTACCGGTGAGGG YE1086 1217941 - 1219194 + | putative cytochrome C TERM 1342 1219205 - 1219235 + T 86 -7.7 -4.67563 | gap 1, opp_overlap 1219207 1219209 1219212, overlap 1219207 1219209 1219212 AGTAATTAATCAATA AAGA-TAAGGGAGC TTCG GCTCCCTTACTCTC TTTTCGTTTCTATTA TERM 1343 1219207 - 1219233 + T 89 -10.3 -3.9258 | gap 1, opp_overlap 1219207 1219209 1219212, overlap 1219205 1219209 1219212 TAATTAATCAATAAA GA-TAAGGGAGC TTCG GCTCCCTTACTC TCTTTTCGTTTCTAT TERM 1344 1219233 - 1219207 - T 100 -10.3 -4.36343 | gap 1, opp_overlap 1219207 1219205 1219209 1219212, overlap 1219209 1219212 TAATTAATCAATAAA GA-TAAGGGAGC TTCG GCTCCCTTACTC TCTTTTCGTTTCTAT TERM 1345 1219209 - 1219230 + T 91 -13.1 -2.70115 | opp_overlap 1219209 1219207 1219212, overlap 1219207 1219205 1219212 ATTAATCAATAAAGA TAAGGGAGC TTCG GCTCCCTTA CTCTCTTTTCGTTTC TERM 1346 1219230 - 1219209 - T 100 -13.1 -3.77023 | opp_overlap 1219207 1219205 1219209 1219212, overlap 1219207 1219212 ATTAATCAATAAAGA TAAGGGAGC TTCG GCTCCCTTA CTCTCTTTTCGTTTC TERM 1347 1219212 - 1219227 + T 80 -10.4 -3.46906 | opp_overlap 1219209 1219207 1219212, overlap 1219209 1219207 1219205 AATCAATAAAGATAA GGGAGC TTCG GCTCCC TTACTCTCTTTTCGT TERM 1348 1219227 - 1219212 - T 89 -10.4 -3.99352 | opp_overlap 1219212 1219209 1219207 1219205, overlap 1219209 1219207 AATCAATAAAGATAA GGGAGC TTCG GCTCCC TTACTCTCTTTTCGT YE1087 1219705 - 1219265 - | putative acetyltransferase thiD 1219890 - 1220690 + | phosphomethylpyrimidine kinase YE1089 1221574 - 1220810 - | hypothetical protein TERM 1349 1220960 - 1220986 + g 85 -5.9 -5.1417 | gap 1 TGCCTCATCTTTTAT GAGATCGAACAG ATAG CTGC-CGATCTC TTTTTCATTTTCTCG TERM 1350 1222209 - 1222188 - g 85 -2.9 -5.61824 | GAAAAGCCAAAAAAA CTTACCTGC ATGG GCGCGTAAG GGGGTCGGGACATCT YE1091 1221970 - 1222500 + | hypothetical protein gutQ 1223545 - 1222580 - | D-arabinose 5-phosphate isomerase gutR 1224308 - 1223538 - | DNA-bindng transcriptional repressor SrlR TERM 1351 1223841 - 1223829 - G 76 -9.1 -3.82499 | ACTAAACTTATCAAA GGCAG ATT CTGCC AGACTGCCATGAAAA TERM 1352 1224230 - 1224250 + g 75 -7.6 -4.15833 | gap 1, opp_overlap 1224228 TGGTCGAAAAATGGG CGGCGAGTT GATC AAC-CGCCG TTTTACCGTGCTGCT gutM 1224758 - 1224393 - | DNA-binding transcriptional activator GutM gutD 1225894 - 1225058 - | sorbitol-6-phosphate dehydrogenase gutB 1226332 - 1225970 - | glucitol/sorbitol-specific PTS system component IIA TERM 1353 1226291 - 1226273 - G 78 -11.7 -3.07113 | opp_overlap 1226275, overlap 1226275 GAGCATGTCATCCAA CAGCGCC TCCCG GGCGCTG TCTCCGATATTGGTA gutE 1227423 - 1226398 - | pts system, glucitol/sorbitol-specific IIBC component gutA 1228007 - 1227459 - | pts system, glucitol/sorbitol-specific iic2 component TERM 1354 1228220 - 1228193 - R 100 -14.4 -2.72977 | opp_overlap 1228191, overlap 1228190 1228195 ATTGCATATAGATCA CACTTTGAAAGA TAAA TCTTTCAAAGTG AATATTAAAAATAAA TERM 1355 1228218 - 1228195 - R 79 -11.2 -2.90797 | opp_overlap 1228191, overlap 1228193 1228190 TGCATATAGATCACA CTTTGAAAGA TAAA TCTTTCAAAG TGAATATTAAAAATA YE1099 1229276 - 1228386 - | lipid kinase TERM 1356 1229544 - 1229530 - R 90 -4.2 -5.66229 | opp_overlap 1229531 1229542, overlap 1229531 ATTAATAATAAAAAA TGGTGA AAA TCACCT ATAATCAATGGGTTG TERM 1357 1229543 - 1229531 - R 74 -7.7 -3.97297 | opp_overlap 1229531 1229542, overlap 1229530 TTAATAATAAAAAAT GGTGA AAA TCACC TATAATCAATGGGTT TERM 1358 1229604 - 1229577 - R 100 -11.3 -5.55001 | TAATAAAAAAGAAAA GGCCAGCCCAA GGGAGA TTGGGTTGGCC AAGGAGGTGGTTCCT TERM 1359 1229716 - 1229740 + r 100 -7.2 -5.87996 | opp_overlap 1229719, overlap 1229719 TTCTAATATTTGCTA AAATGCCATC CTGAC GATGGCATTA TTTTTTTATTGCTTA TERM 1360 1229737 - 1229719 - R 83 -8.9 -4.11371 | opp_overlap 1229719 1229716 TAATATTTGCTAAAA TGCCATC CTGAC GATGGCA TTATTTTTTTATTGC TERM 1361 1229719 - 1229737 + r 100 -8.9 -4.96435 | opp_overlap 1229719, overlap 1229716 TAATATTTGCTAAAA TGCCATC CTGAC GATGGCA TTATTTTTTTATTGC YE1100 1231162 - 1229759 - | putative protease YE1102 1231798 - 1232136 + | putative DNA-binding protein YE1103 1232553 - 1232215 - | hypothetical protein baeR 1233351 - 1232632 - | DNA-binding transcriptional regulator BaeR baeS 1234736 - 1233360 - | signal transduction histidine-protein kinase BaeS yegB 1236132 - 1234753 - | multidrug efflux system protein MdtE TERM 1362 1235344 - 1235332 - G 70 -7.7 -3.86194 | AACCGGCGTCATAAA TGGCA ACA TGCCA CTGCCGATACGGGCG TERM 1363 1235754 - 1235711 - G 77 -4.4 -5.15634 | gap 1, overlap 1235734 TATTCCACCAAAAAA CCGCCCAGCGCAGGCCCGACC AAT GGCCCAATCTG-GCCAGGCAG TGTGACGAATGCCAT yegO 1239563 - 1236489 - | multidrug efflux system subunit MdtC TERM 1364 1238399 - 1238374 - G 73 -5.3 -4.5442 | opp_overlap 1238374 TCGTCAACCACAAAA CCGGTGGCGAT GGTC AGCGCCATCAG CGACAGGTTATTGAG yegN 1242703 - 1239560 - | multidrug efflux system subunit MdtB TERM 1365 1241407 - 1241419 + g 78 -6.2 -4.7657 | overlap 1241416 CGGCCCCTTTCAGCG CCGC ATCCA GCGG TTTTTCGCCTTTTTC yegM 1244034 - 1242703 - | multidrug efflux system subunit MdtA TERM 1366 1243873 - 1243888 + g 77 -10.4 -3.61398 | opp_overlap 1243865 CATATTACGCCGCCC CCCTGC GCGG GCAGGG TTGTTCCCCACCGCA YE1110 1244483 - 1244217 - | hypothetical protein TERM 1367 1244612 - 1244648 + r 100 -13.1 -3.80573 | opp_overlap 1244606, overlap 1244613 TCTTGACAATGGCCG CTGCGGTGGCAGTGA AGTTAAC TCACTGCTACCGCAA TTTGCTACTGATAAG TERM 1368 1244613 - 1244647 + r 100 -16.6 -2.88023 | opp_overlap 1244606, overlap 1244612 CTTGACAATGGCCGC TGCGGTGGCAGTGA AGTTAAC TCACTGCTACCGCA ATTTGCTACTGATAA YE1111 1245684 - 1244653 - | putative fimbrial subunit YE1112 1248333 - 1245760 - | outer membrane usher protein TERM 1369 1246129 - 1246141 + gr 83 -9.1 -4.11216 | CATGCTTTGGGTATC CAGCG CTA CGCTG TTTTGGCGATAAGCG TERM 1370 1247121 - 1247101 - GR 70 -7.6 -3.65425 | gap 1 GTTATACAGGGTAAA GCCGTACGG CATG CCGTA-GGC CAGCGAGGTCTGGGC YE1113 1248976 - 1248296 - | putative fimbrial chaperone protein TERM 1371 1248509 - 1248526 + gr 72 -7.7 -3.87815 | gap 1 CAATTGCTTACCGTG GCGC-GAG AAG CTCAGCGC TTTATAAGCATCAGC TERM 1372 1248608 - 1248621 + gr 85 -3.1 -5.53991 | AATCGAGATAAATAA CTGGT TGCC ATCAG TTTTTTTACTGGATG TERM 1373 1249070 - 1249036 - R 100 -10.8 -5.44198 | AATAAATAATAAAAA TTACTGCCCCGACA AATAAAA TATCGGGGCGGTAA AGACACAACAAATAC YE1114 1249645 - 1249118 - | putative fimbrial protein TERM 1374 1249865 - 1249917 + r 71 -2.3 -5.10208 | gap 1, overlap 1249870 1249876 1249878 GGGATTATTTATTAT TAATAGTGG-AATGCCGCCTTAGT ATAAGG ATTAAGGCGGTATTATTATGATTA TTTTTGTTGGAATTA TERM 1375 1249876 - 1249905 + r 83 -9.4 -3.93867 | overlap 1249870 1249865 1249878 TTATTAATAGTGGAA TGCCGCCTTAGT ATAAGG ATTAAGGCGGTA TTATTATGATTATTT TERM 1376 1249878 - 1249903 + r 78 -9.8 -3.53597 | overlap 1249870 1249876 1249865 ATTAATAGTGGAATG CCGCCTTAGT ATAAGG ATTAAGGCGG TATTATTATGATTAT TERM 1377 1250274 - 1250257 - R 95 -12.7 -3.32844 | opp_overlap 1250257 CGCGGGATTCCACAA GGGTGCG CGCC CGCACCC TTTGGCGGTTGGTTC TERM 1378 1250257 - 1250274 + r 100 -12.7 -3.62478 | opp_overlap 1250257 CGCGGGATTCCACAA GGGTGCG CGCC CGCACCC TTTGGCGGTTGGTTC YE1115 1251818 - 1250466 - | putative chaperone YE1116 1255316 - 1251912 - | putative sensor protein TERM 1379 1253763 - 1253747 - G 71 -10.1 -2.76315 | overlap 1253746 GCAATAGCCTGAAAT CCAGCCG GTA CGGCTGA CGCTGAGTGAGCGCC TERM 1380 1255347 - 1255324 - R 71 -3.2 -5.00895 | gap 1, opp_overlap 1255324 1255325 1255328 1255344, overlap 1255326 1255328 TCCATCACATAAAAA TAGACCGCATT TGA AATGCGGTG-A GTTTGTTGACAAACC TERM 1381 1255346 - 1255326 - R 79 -8.3 -4.12748 | opp_overlap 1255325 1255324 1255328 1255344, overlap 1255324 1255328 CATCACATAAAAATA GACCGCATT TGA AATGCGGTG AGTTTGTTGACAAAC TERM 1382 1255344 - 1255328 - R 84 -10.9 -3.64281 | opp_overlap 1255325 1255324 1255328, overlap 1255326 1255324 TCACATAAAAATAGA CCGCATT TGA AATGCGG TGAGTTTGTTGACAA TERM 1383 1255328 - 1255344 + r 77 -10.9 -2.75825 | opp_overlap 1255328 1255326 1255324, overlap 1255325 1255324 TCACATAAAAATAGA CCGCATT TGA AATGCGG TGAGTTTGTTGACAA mgtE 1257043 - 1255568 - | putative divalent cation transport protein TERM 1384 1255764 - 1255752 - G 71 -10.5 -2.79183 | GCCAGCGTCATCACA CCGCC CAT GGCGG GATCGCCATAGAGCA yfgG 1257282 - 1257091 - | hypothetical protein ppx 1259038 - 1257548 - | exopolyphosphatase ppk 1261190 - 1259121 - | polyphosphate kinase TERM 1385 1260573 - 1260563 - G 73 -5.4 -4.60255 | AGAAGCCTTTAAAAA TCTC ATC GAGA CAATACCTAAGAATA trp1400B 1262681 - 1261887 - | IS1400 transposase B trp1400A 1263022 - 1262732 - | IS1400 transposase A TERM 1386 1262824 - 1262834 + g 75 -5.4 -4.8048 | overlap 1262800 GATTCTCGTCTTCTA GATC TTT GATC TTTTTGATATCAGCG TERM 1387 1263514 - 1263525 + H 71 -2.2 -5.09245 | AGAGTTTTTTGGTGG CACG ATGC TGTG TTTTTCTACTTTTAA TERM 1388 1263899 - 1263917 + H 100 -9 -4.74917 | opp_overlap 1263899 1263902 GTTCAAGTGGCCAAA TAATGGTT GAC AACCATTA TTTTATGTGTTTCAT TERM 1389 1263917 - 1263899 - H 75 -9 -3.57561 | opp_overlap 1263899, overlap 1263902 GTTCAAGTGGCCAAA TAATGGTT GAC AACCATTA TTTTATGTGTTTCAT YE1123A 1263965 - 1264390 + | hypothetical protein TERM 1390 1264601 - 1264620 + T 81 -12.2 -2.53015 | CTGATAATTATATTG TTGGGGTC GTAC GACCCCAA TGGGTTAAGCACTCT speG 1265170 - 1264625 - | spermidine acetyltransferase TERM 1391 1265280 - 1265255 - R 89 -6.1 -5.27477 | gap 1, opp_overlap 1265255, overlap 1265271 AGGGGAATTAAAAAA GGCGCTCACCTT AAA ATGGC-AGCGCC TTTAATCAATATTCA purN 1265944 - 1265306 - | phosphoribosylglycinamide formyltransferase purI 1267279 - 1266236 - | phosphoribosylaminoimidazole synthetase TERM 1392 1267040 - 1267024 - G 74 -10.9 -2.8676 | overlap 1267023 ACATAGCGACTAAAT CGATACC GAT GGTATCG TGACGTTTCAGGTCC upp 1267515 - 1268141 + | uracil phosphoribosyltransferase TERM 1393 1268168 - 1268151 - f 81 -11.3 -2.85021 | opp_overlap 1268151 AAATAACTGATGATA GCCGACT CGAT AGTCGGC TTTTTTTTGAATAAT TERM 1394 1268151 - 1268168 + F 100 -11.3 -5.82316 | opp_overlap 1268151 AAATAACTGATGATA GCCGACT CGAT AGTCGGC TTTTTTTTGAATAAT TERM 1395 1268438 - 1268448 + G 74 -6.8 -4.45261 | AAAATTCCTGCTTAT CTGG GTT CCAG TTTTGCCTTTATTTC TERM 1396 1268499 - 1268511 + G 77 -6.9 -4.50976 | overlap 1268500 CATTGGGTTACGAAG TCGCC TTG GGCGG TTTTATCATGTGCGG uraA 1268234 - 1269523 + | uracil transporter TERM 1397 1269533 - 1269563 + F 100 -11.2 -4.62336 | AAGTAAAAGAGCCAT CTGGTCGAACTG CACTTGT CGGTTCGGCCAG TTTTTCGCCTCAGGT TERM 1398 1270179 - 1270165 - g 71 -4.3 -4.79223 | TCAGATGATGAAAAA TTGCA GGCTT TGCAA TTACGCGCCAAATTA YE1130 1269637 - 1270356 + | DNA replication initiation factor yfgD 1270757 - 1270404 - | putative arsenate reductase YE1132 1272217 - 1270769 - | hypothetical protein TERM 1399 1271141 - 1271161 + g 80 -7.5 -4.64861 | GGTTGCGGCTTGCAG GCGGCTAAT GGC ACTGGCCGC TTTGTTTTGCCCCAA TERM 1400 1271297 - 1271287 - G 73 -3.2 -4.84311 | opp_overlap 1271291, overlap 1271290 CTTGATACAACAAAA TAGC CTG GCCA TATTTGGCGGCCAGT TERM 1401 1271839 - 1271858 + g 75 -5.7 -4.60797 | opp_overlap 1271839 TTTCATGAGCTAATA CGGAAGC CAGTTC GCTTTCG TTTTCTGTATAGCGG perM 1272755 - 1273819 + | hypothetical protein TERM 1402 1274125 - 1274174 + T 100 -21.9 -3.13299 | gap 1, overlap 1274130 TATTCACTTTTGTTC TTGAGCCTTATCCGT-GTTTGAGA TTA TCTCAAACCACGGATAAGGTTCGA TATTCCGTATGATGA TERM 1403 1274130 - 1274169 + T 100 -20.4 -3.19789 | gap 1, overlap 1274125 ACTTTTGTTCTTGAG CCTTATCCGT-GTTTGAGA TTA TCTCAAACCACGGATAAGG TTCGATATTCCGTAT YE1134 1275172 - 1274153 - | putative transposase for IS1667 TERM 1404 1274528 - 1274553 + g 91 -9.7 -4.57569 | CACACCAGGGACTTT CATGACCCGCT GGCA GGCGGGTTGTG TTTTTGCCCAACTGC TERM 1405 1275367 - 1275388 + r 78 -9.5 -3.59315 | gap 1 ATGAGTTCGCTGGCT GCC-TTGCTG CAA CAGCAATGGC TTTGGGGATCATTCG TERM 1406 1275438 - 1275423 - R 91 -6.1 -5.45652 | opp_overlap 1275423 ATTGCCAATAAAAAA GAGCG TTTGAG CGCTC TTTTTTTGCTCTTCT TERM 1407 1275423 - 1275438 + r 100 -6.8 -5.6473 | opp_overlap 1275423 ATTGCCAATAAAAAA GAGCGT TTGA GCGCTC TTTTTTTGCTCTTCT bcp 1275938 - 1275468 - | thioredoxin-dependent thiol peroxidase gcvR 1276510 - 1275941 - | glycine cleavage system transcriptional repressor TERM 1408 1276033 - 1276047 + g 71 -8.6 -3.69216 | overlap 1276030 GCTGATAAAAAGCGT GTTCGA TTA TCGAAC TGTTTTGGCTAGCAG TERM 1409 1276377 - 1276365 - G 80 -6.3 -4.81814 | AGCAGCATAATAAAA GTGAA CTC TTCAC CAAACATGGCCAGCC TERM 1410 1276575 - 1276564 - H 93 -2.2 -6.15717 | TAAACATAAAAAAAA CCTG CTGC CAAG CGCTTACAACACAGT dapA 1276675 - 1277556 + | dihydrodipicolinate synthase TERM 1411 1277681 - 1277669 - g 76 -9.1 -3.93236 | overlap 1277660 GACCAACGCTACAAA CGCCA GGT TGGCG GTGACGAGTCTTATC TERM 1412 1277973 - 1277959 - g 71 -2.8 -4.95155 | GCTACAGGATAAAAA CTGG GCAATCG CCAG CCGCCAGGATGCCAG dapX 1277573 - 1278631 + | lipoprotein TERM 1413 1278657 - 1278634 - f 100 -9.6 -4.69656 | opp_overlap 1278639, overlap 1278635 AAGTACTCAATAAAA CCAAAGGGGC TTCG GCCCCTTTAA ACCCGTCATACTTCA TERM 1414 1278656 - 1278635 - f 83 -10.9 -3.40709 | opp_overlap 1278639, overlap 1278634 AGTACTCAATAAAAC CAAAGGGGC TTCG GCCCCTTTA AACCCGTCATACTTC TERM 1415 1278639 - 1278652 + F 76 -9.5 -3.54741 | opp_overlap 1278635 1278634 CTCAATAAAACCAAA GGGGC TTCG GCCCC TTTAAACCCGTCATA TERM 1416 1278760 - 1278742 - f 73 -8.9 -3.54382 | overlap 1278738 CTTAAGAAATAGTAA GCTCATC GGGAT GATGAGC CTCATCAGAGGCTCA TERM 1417 1279095 - 1279072 - g 71 -4.7 -4.57581 | overlap 1279068 ATGGTAAACAACAAA TTTAACCAT TTCATT ATGGCTAAA TTAGAAGAAGCCGGT purC 1278916 - 1279629 + | phosphoribosylaminoimidazole-succinocarboxamide synthase TERM 1418 1279657 - 1279685 + F 89 -10.3 -3.99775 | overlap 1279660 TTACGTTTGTCTGGC ACAGGGGAGATAG CTG CTATCTCCCCTCA TTGTTCTTACTCAAT TERM 1419 1279660 - 1279682 + F 100 -16.4 -3.0438 | overlap 1279657 CGTTTGTCTGGCACA GGGGAGATAG CTG CTATCTCCCC TCATTGTTCTTACTC YE1141 1280059 - 1280823 + | hypothetical protein TERM 1420 1280871 - 1280893 + F 91 -8.4 -4.63218 | CATAAGAAGACTTTT TGCCGGTG CATTCGC CGCCGGCA TTTTATTGCAAGGCA yeaL 1280961 - 1281413 + | hypothetical protein YE1143 1281445 - 1283478 + | putative acetyltransferase YE1144 1283562 - 1284197 + | esterase YpfH YE1145 1284418 - 1284224 - | hypothetical protein YE1146 1285157 - 1284453 - | putative carboxypeptidase TERM 1421 1284749 - 1284733 - G 78 -5.1 -4.85599 | opp_overlap 1284735 GTCAGCGGATAAAAA TACCCAC CCA GTTGGTA TTCCCACGGCTCCAG dapE 1286281 - 1285154 - | succinyl-diaminopimelate desuccinylase YE1148 1286705 - 1286283 - | hypothetical protein YE1149 1287341 - 1286868 - | hypothetical protein TERM 1422 1287756 - 1287733 - R 78 -8.9 -3.86015 | opp_overlap 1287733 TATCGTCCGCAGAAA GGCAGAAAC GTCATT GTTCCTGCC TTTTTTATTGGTTAT TERM 1423 1287733 - 1287756 + r 95 -7.4 -5.57396 | opp_overlap 1287733 TATCGTCCGCAGAAA GGCAGAAACG TCAT TGTTCCTGCC TTTTTTATTGGTTAT YE1150 1289015 - 1287801 - | hypothetical protein TERM 1424 1288823 - 1288810 - G 77 -4.5 -4.84017 | overlap 1288797 AATGCTTCATAAAAA GCACC AGTT AGTGC CGCGCCATCAATACC TERM 1425 1289068 - 1289037 - R 84 -11 -3.61517 | opp_overlap 1289041 1289045, overlap 1289038 1289041 ATCTCCTGTTAACAA TTAATTAAGGAGGC CTAA GCCCCCTTAATTAT GATGCTATTAACTTT TERM 1426 1289067 - 1289038 - R 100 -14.5 -2.76696 | opp_overlap 1289041 1289045, overlap 1289037 1289041 TCTCCTGTTAACAAT TAATTAAGGAGGC CTAA GCCCCCTTAATTA TGATGCTATTAACTT TERM 1427 1289064 - 1289041 - R 91 -11.8 -3.53444 | opp_overlap 1289041 1289045, overlap 1289038 1289037 CCTGTTAACAATTAA TTAAGGAGGC CTAA GCCCCCTTAA TTATGATGCTATTAA TERM 1428 1289041 - 1289064 + r 76 -9.6 -3.47307 | opp_overlap 1289038 1289037 1289041, overlap 1289045 CCTGTTAACAATTAA TTAAGGAGGC CTAA GCCCCCTTAA TTATGATGCTATTAA TERM 1429 1289556 - 1289580 + r 100 -8.7 -5.08824 | GCGTCAACAGTCTGA GGTGACATTAA TCG TTAATATCACC TTTTTTACGTACCGC YE1151 1292744 - 1289613 - | aminoglycoside/multidrug efflux system TERM 1430 1292115 - 1292137 + g 76 -10.7 -3.11316 | GGCTATCTGGCTGTT TTGTGACTG GATTG CAGTCACAA TATCTTGGGTAGTAA YE1152 1293154 - 1293432 + | hypothetical protein narP 1294100 - 1293471 - | nitrate/nitrite response regulator protein NarP napF 1294605 - 1295108 + | ferredoxin-type protein NapF napD 1295098 - 1295364 + | assembly protein for periplasmic nitrate reductase TERM 1431 1296400 - 1296385 - g 82 -5.4 -5.02476 | gap 1 ATACGCTGGAAAAAA CCGC-CA AAA TGAGCGG TGTGCCGGAAGATCA napA 1295361 - 1297856 + | nitrate reductase napB 1297939 - 1298394 + | diheme cytochrome c550 TERM 1432 1298370 - 1298382 + F 78 -9.1 -3.76224 | CGGTAATAGCTTCCA GCCAG CAC CTGGC TTTGGTCAATAAGCG TERM 1433 1298466 - 1298501 + G 75 -11.8 -2.54687 | gap 1, overlap 1298465 1298466 1298495 TAAACGAATATGGCA GTGGTG-GCGTCGGCCG AGC CGGCTGGCGCTCGGCAC GTTACTGCTGATTGG napC 1298422 - 1299021 + | cytochrome c-type protein NapC TERM 1434 1299079 - 1299107 + F 100 -11.8 -5.17744 | opp_overlap 1299079 TGAACCCGAATCAAA TGCTCTGTGGAC TGTGC GTCGACAGAGCA TTTTTATTGCTATAT TERM 1435 1299107 - 1299079 - f 100 -11.8 -3.93369 | opp_overlap 1299079 TGAACCCGAATCAAA TGCTCTGTGGAC TGTGC GTCGACAGAGCA TTTTTATTGCTATAT YE1159 1299175 - 1299426 + | hypothetical protein YE1160 1299423 - 1299710 + | hypothetical protein YE1161 1299739 - 1300314 + | hypothetical protein TERM 1436 1300341 - 1300360 + F 70 -7.8 -3.71792 | overlap 1300338 1300342 TTGGCTCTCTGCTTG CTGCCGCA ATAT TGCGGCAC TTCATTTTCAATTCC TERM 1437 1300342 - 1300359 + F 81 -11.3 -2.82352 | overlap 1300338 1300341 TGGCTCTCTGCTTGC TGCCGCA ATAT TGCGGCA CTTCATTTTCAATTC TERM 1438 1300633 - 1300616 - g 76 -9.1 -3.95584 | opp_overlap 1300615 1300618, overlap 1300600 GTGTCACCAACCAAA CCGCTGG CGAC CCAACGG GATTTGGCGCTGGCT TERM 1439 1300920 - 1300962 + G 74 -2.7 -5.0916 | overlap 1300911 CTTCACTGGAACCGA CATTCGGTGGCATTAATCT GGAGG ATATTAAAGCGCCCGAGTG TTTTTATATTGAGCA maeB 1300535 - 1302814 + | malic enzyme TERM 1440 1302865 - 1302845 - T 88 -9.7 -4.18018 | opp_overlap 1302840, overlap 1302846 CGTGGTGAGTCAAAA GGGGAGCTA TAT TAGCTCCCA TGAGGTTAATGACAA TERM 1441 1302864 - 1302846 - T 95 -13.2 -3.10597 | opp_overlap 1302840, overlap 1302845 GTGGTGAGTCAAAAG GGGAGCTA TAT TAGCTCCC ATGAGGTTAATGACA TERM 1442 1302938 - 1302954 + T 70 -9.3 -2.87931 | opp_overlap 1302919 1302916 TAACCCCCTCCCTGG GGGCTCG AGC CGCGCCC TATATGGACGCTCCC TERM 1443 1303203 - 1303252 + T 100 -19.7 -3.13299 | gap 1, overlap 1303208 TATTCACTTTTGTTC TTGAGCCTTATCCGT-GTTTGAGA TTA TCTCAAACCGCGGATAAGGTTCGA TATTCCGTATGATGA TERM 1444 1303208 - 1303247 + T 100 -18.2 -3.19789 | gap 1, overlap 1303203 ACTTTTGTTCTTGAG CCTTATCCGT-GTTTGAGA TTA TCTCAAACCGCGGATAAGG TTCGATATTCCGTAT YE1163 1304250 - 1303231 - | putative transposase for IS1667 TERM 1445 1303606 - 1303631 + g 80 -7.5 -4.57569 | opp_overlap 1303598 1303611, overlap 1303611 CACACCAGGGACTTT CAAGACCCGCT GGCA GGCGGGTTGTG TTTTTGCCCAACTGC TERM 1446 1303611 - 1303626 + g 76 -8.2 -4.07746 | opp_overlap 1303598 1303611, overlap 1303606 CAGGGACTTTCAAGA CCCGCT GGCA GGCGGG TTGTGTTTTTGCCCA TERM 1447 1304546 - 1304574 + H 100 -13.9 -4.73635 | GACTTTGTCAGCAGT CGGAGGGGAGCTA TAT TAGCTCCGCTCTG TTTTATTAAATTGTA YE1165 1304987 - 1305673 + | LuxR family transcriptional regulatory protein YE1166 1306582 - 1305680 - | LysR family transcriptional regulator YE1167 1307152 - 1306694 - | hypothetical protein hemF 1308078 - 1307152 - | coproporphyrinogen III oxidase YE1169 1308309 - 1308734 + | putative acetyltransferase TERM 1448 1309104 - 1309085 - g 76 -9.2 -3.92592 | ACGTTTAATACCAAA GCCGAGGC TGAT GCCTGGGC AAAAATGGTTGAGTC YE1170 1308992 - 1310110 + | putative integrase/recombinase protein YE1171 1310337 - 1311557 + | putative maturase protein TERM 1449 1312460 - 1312450 - g 91 -6.8 -5.32599 | opp_overlap 1312450 GATAAAATAGAAAAA GTGG TTT CCAC TGAGTTAGAGAAATA YE1172 1311562 - 1313568 + | putative DNA-binding protein TERM 1450 1313723 - 1313763 + T 100 -11.4 -5.08824 | gap 1, overlap 1313734 ACACACTACTTGCCT TAGATTGGGAT-GGGCCAG TTAT CTGGCCCTATCTTAATTTA TTTTTTGAATCCAAA TERM 1451 1313734 - 1313751 + T 95 -12.7 -3.27828 | overlap 1313723 GCCTTAGATTGGGAT GGGCCAG TTAT CTGGCCC TATCTTAATTTATTT YE1175 1315768 - 1314461 - | hypothetical protein TERM 1452 1314565 - 1314575 + g 74 -4 -4.83759 | CAATTTTTATGGTTT CATT AAT AATG TTTTTCGCTTTACTT YE1175A 1316175 - 1315768 - | Cro/CI family transcriptional regulator YE1176 1316497 - 1316273 - | hypothetical protein TERM 1453 1316721 - 1316699 - R 100 -6.3 -5.99154 | opp_overlap 1316699 1316698 TACGAAATAAAAAAA CCAGCGT CTGATTGCT ACGCTGG ATTTGCTGAATAATC YE1177 1318384 - 1316984 - | putative conjugal transfer protein YE1177A 1318577 - 1318398 - | hypothetical protein YE1178 1319367 - 1318588 - | putative conjugal transfer protein TERM 1454 1319122 - 1319140 + g 76 -8.8 -4.11773 | opp_overlap 1319122, overlap 1319124 1319131 CTGATCCCAGATATA TGCCGCAG GTG CTGCGGTG TTTTGCAGCATGTTT TERM 1455 1319124 - 1319138 + g 85 -11.4 -3.64984 | opp_overlap 1319122, overlap 1319122 1319131 GATCCCAGATATATG CCGCAG GTG CTGCGG TGTTTTGCAGCATGT YE1179 1319917 - 1319687 - | hypothetical protein YE1180 1320077 - 1320742 + | hypothetical protein TERM 1456 1320749 - 1320724 - T 70 -5.7 -4.25283 | gap 1, opp_overlap 1320730 1320736, overlap 1320725 1320730 ATTTTGCCAGCAAAA CTTAAATTTTAG CCG CTAAAATTT-AG CAGTATGATAGCAAA YE1181 1321228 - 1320959 - | hypothetical protein YE1182 1322389 - 1321502 - | putative plasmid-related transcriptional repressor protein YE1183 1322774 - 1322394 - | hypothetical protein TERM 1457 1322442 - 1322459 + g 73 -5.5 -4.63218 | gap 1 TGATCTTTTTTTGTT GCGG-GCG ATT TGCTCCGC TTTTGTTGGGCGGCC TERM 1458 1322992 - 1322980 - R 70 -7.7 -3.64599 | GCACCAGAGTTTAAA TTGGC TTT GCCAA TGCGCTGATCAGTCG TERM 1459 1323266 - 1323306 + r 73 -8.3 -3.62418 | overlap 1323270 TAGTGAGTGATGTTA TTATGTGGAGTCGCAGGTA GGT TGGTTGCGACTCCACTTAC TTTCAGCTAACTTAT TERM 1460 1323270 - 1323302 + r 100 -13.5 -3.53031 | overlap 1323266 GAGTGATGTTATTAT GTGGAGTCGCAGGTA GGT TGGTTGCGACTCCAC TTACTTTCAGCTAAC ygiW 1323731 - 1323318 - | hypothetical protein yfeY 1324114 - 1324725 + | hypothetical protein TERM 1461 1324718 - 1324736 + F 82 -4.6 -5.29445 | opp_overlap 1324718, overlap 1324720 TATGGCGCGCTAAAA GCGAATAA ATA TTATTCTC TTTTTATTATTAAGG TERM 1462 1324720 - 1324734 + F 70 -5.8 -4.27297 | opp_overlap 1324718, overlap 1324718 TGGCGCGCTAAAAGC GAATAA ATA TTATTC TCTTTTTATTATTAA TERM 1463 1324741 - 1324779 + F 100 -13.4 -3.8591 | ATATTATTCTCTTTT TATTATTAAGGCGCGGCT GAT ATCTGCGTCTTAATAATA TTCTTCCTTCTCAAA YE1187 1324901 - 1325806 + | hypothetical protein TERM 1464 1325824 - 1325852 + T 100 -8.2 -4.92783 | gap 1, opp_overlap 1325831, overlap 1325831 GCAGCTCTTCTGAAT GACGAAAGGCCGG TTTT CCGGCCTTTA-TC TTTTTGTGATGAGTT TERM 1465 1325831 - 1325846 + T 100 -11.8 -4.60808 | opp_overlap 1325831, overlap 1325824 TTCTGAATGACGAAA GGCCGG TTTT CCGGCC TTTATCTTTTTGTGA TERM 1466 1325846 - 1325831 - T 100 -11.8 -3.84246 | opp_overlap 1325824 1325831 TTCTGAATGACGAAA GGCCGG TTTT CCGGCC TTTATCTTTTTGTGA nanA 1326769 - 1325879 - | N-acetylneuraminate lyase YE1189 1327486 - 1326851 - | N-acetylmannosamine-6-phosphate 2-epimerase TERM 1467 1327694 - 1327710 + H 73 -5.1 -4.58663 | overlap 1327695 CAAAAAGCGTTTGTT GTGGAGT GCA ACTCCAA TTTTTAAAAAATAAT YE1190 1327796 - 1328710 + | N-acetylmannosamine kinase TERM 1468 1328738 - 1328725 - f 84 -3.9 -5.52079 | ACATCAAAACAAAAA TATTG AGGT CAATA TGATCAGTGGATCAT YE1191 1328792 - 1329202 + | hypothetical protein TERM 1469 1329259 - 1329274 + F 100 -11.8 -5.85737 | TATCTTTGACATCTT CCCCGG CCCC CCGGGG TTTTTTTATTGATCT YE1192 1329398 - 1330276 + | rpiR family transcriptional regulatory protein TERM 1470 1330314 - 1330351 + F 81 -11.3 -2.82558 | gap 1, overlap 1330311 1330310 1330306 ATTTCTAGCCGCTGC TGCGGGG-ATCTTCCGCC AGC GGTGGTAAATACCCCGCA TCCTGTTGCTTATCT TERM 1471 1330440 - 1330471 + F 70 -3.8 -4.90525 | gap 1, opp_overlap 1330449 1330450, overlap 1330450 GCGGGCTGATCTTAT ACACTCAAATGGAGT TTT ACTCC-TTTGATTGA TTTTGTTTGGAGTTA TERM 1472 1330450 - 1330462 + F 76 -7.7 -4.08579 | opp_overlap 1330450 1330449, overlap 1330440 CTTATACACTCAAAT GGAGT TTT ACTCC TTTGATTGATTTTGT TERM 1473 1330720 - 1330682 - f 100 -12.4 -4.12532 | CCTCGTAGAGACAAA CCATTGCGCTGGTACAAG CAG CTCACCCCTGCGCAATGG AAGGCATTTATTGCC nanT 1330685 - 1332157 + | putative sialic acid transporter TERM 1474 1332186 - 1332207 + F 84 -6.5 -5.06414 | GAACGCATTTTTATC GCCCGGT GCAGTTTA GCCGGGC TTTTTATTAACCAGA TERM 1475 1333023 - 1333038 + G 90 -9 -4.64676 | overlap 1333028 TTGATACCGGCGGAC GTGGTG CCAC CACCAC TTTTGTTGAGCGTGG cysP 1332509 - 1333444 + | thiosulfate transporter subunit cysT 1333444 - 1334280 + | sulfate/thiosulfate transporter subunit cysW 1334280 - 1335155 + | sulfate/thiosulfate transporter permease subunit cysA 1335145 - 1336236 + | sulfate/thiosulfate transporter subunit TERM 1476 1337246 - 1337266 + G 79 -9.7 -3.85817 | overlap 1337248 GATTGTGGCGATTAT TTGCGATCG TGG CGATCGCTA TTTATCAACCGGCGT TERM 1477 1337248 - 1337264 + G 86 -12.3 -3.51934 | overlap 1337246 TTGTGGCGATTATTT GCGATCG TGG CGATCGC TATTTATCAACCGGC cysM 1336464 - 1337291 + | cysteine synthase B TERM 1478 1337312 - 1337293 - T 80 -10 -3.72576 | opp_overlap 1337293 GCGTTTTTGATTAAA GGGTGTGC ACCA ACACACCC TTTGCCGGTTGTACA TERM 1479 1337293 - 1337312 + T 78 -9.3 -3.62591 | opp_overlap 1337293 GCGTTTTTGATTAAA GGGTGTG CACCAA CACACCC TTTGCCGGTTGTACA YE1199 1339294 - 1337339 - | putative ABC transporter, ATP-binding protein YE1200 1340533 - 1339325 - | HlyD family secretion protein YE1201 1340722 - 1341405 + | putative two-component system response regulator YE1202 1341431 - 1342798 + | putative two-component system sensor kinase TERM 1480 1342840 - 1342872 + T 100 -16.5 -3.63744 | opp_overlap 1342845, overlap 1342845 GACACTTTTCAGCCT TAAAACGCCTGATGA ACT TCATCGGGCGTTTTG TATTTTAACGACAGA TERM 1481 1342867 - 1342845 - T 100 -12 -4.11216 | opp_overlap 1342840 1342845 TTTTCAGCCTTAAAA CGCCTGATGA ACT TCATCGGGCG TTTTGTATTTTAACG TERM 1482 1342845 - 1342867 + T 100 -14.2 -4.89567 | opp_overlap 1342845, overlap 1342840 TTTTCAGCCTTAAAA CGCCTGATGA ACT TCATCGGGCG TTTTGTATTTTAACG YE1203 1343636 - 1342839 - | putative transposase for insertion element IS1669 YE1204 1343968 - 1343654 - | IS1669 hypothetical protein TERM 1483 1344120 - 1344137 + r 100 -12.7 -4.31085 | opp_overlap 1344120 CAGACTAAACAAAAA CGGCGCT CAAG AGCGCCG TTTTCCATTCGTATA TERM 1484 1344137 - 1344120 - R 100 -12.7 -5.35815 | opp_overlap 1344120 CAGACTAAACAAAAA CGGCGCT CAAG AGCGCCG TTTTCCATTCGTATA crr 1344665 - 1344156 - | glucose-specific PTS system component ptsI 1346441 - 1344714 - | phosphoenolpyruvate-protein phosphotransferase TERM 1485 1345114 - 1345093 - G 72 -10.3 -3.01712 | opp_overlap 1345098, overlap 1345098 TCGTTTGTCCCAATA CTAAAGAAG TCAA CTTCTTTAG CTAAATGGCGAGCGA TERM 1486 1345375 - 1345386 + g 81 -5.8 -5.00196 | opp_overlap 1345361 CGGATGGCACGCCAG CCCA GGAA TGGG TTTTCTTCTTTCGGC hpr 1346746 - 1346489 - | phosphohistidinoprotein-hexose phosphotransferase component of PTS system (Hpr) TERM 1487 1347145 - 1347178 + r 77 -11.1 -2.83522 | opp_overlap 1347154, overlap 1347154 ACTTTGAAGCACGCC ACAAAAAAAGCACCC ATGA GGGTGCTTTTTTAGC ATTTAGTGCGACGGT TERM 1488 1347169 - 1347154 - R 100 -10.4 -5.626 | opp_overlap 1347154 1347145 CACGCCACAAAAAAA GCACCC ATGA GGGTGC TTTTTTAGCATTTAG TERM 1489 1347154 - 1347169 + r 100 -10.4 -5.12707 | opp_overlap 1347154, overlap 1347145 CACGCCACAAAAAAA GCACCC ATGA GGGTGC TTTTTTAGCATTTAG cysK 1348166 - 1347198 - | cysteine synthase A TERM 1490 1347958 - 1347974 + g 87 -10.9 -4.15029 | overlap 1347935 ATGCCGGTATTGCCA CTGGTAG GTT CTACCAG TTCTTTGTCTGCGGT cysZ 1349033 - 1348362 - | putative sulfate transport protein CysZ TERM 1491 1349947 - 1349914 - g 71 -4.5 -4.57205 | gap 1 AAAAACTGAAAGAAA CCGTTTTGGTGCTGCA TGT TGCTGCAC-ATCACGG TGGTGCTCTGGGTGG zipA 1349310 - 1350332 + | cell division protein ZipA TERM 1492 1350368 - 1350384 + F 100 -10.8 -5.5762 | opp_overlap 1350363 TCGAATTAACCCGAA CCCCCG CATGC CGGGGG TTTTTTATCTTTGAT ligA 1350408 - 1352426 + | NAD-dependent DNA ligase LigA YE1212 1352441 - 1352659 + | hypothetical protein TERM 1493 1352784 - 1352827 + T 86 -9 -4.36914 | gap 1, opp_overlap 1352791, overlap 1352787 1352789 1352791 CCTATAGTGTTGTAT TCAGA-TATGGCGATGAACAG TCG CAGATCATCGCCATAGTCTTA TTTTGTAGGGCACAA TERM 1494 1352787 - 1352824 + T 100 -10.7 -4.30995 | gap 1, opp_overlap 1352791, overlap 1352784 1352789 1352791 ATAGTGTTGTATTCA GA-TATGGCGATGAACAG TCG CAGATCATCGCCATAGTC TTATTTTGTAGGGCA TERM 1495 1352789 - 1352821 + T 93 -13.5 -2.84625 | opp_overlap 1352791, overlap 1352787 1352784 1352791 AGTGTTGTATTCAGA TATGGCGATGAACAG TCG CAGATCATCGCCATA GTCTTATTTTGTAGG TERM 1496 1352819 - 1352791 - T 83 -11.7 -2.91264 | opp_overlap 1352789 1352787 1352784 1352791 TGTTGTATTCAGATA TGGCGATGAACAG TCG CAGATCATCGCCA TAGTCTTATTTTGTA TERM 1497 1352791 - 1352819 + T 83 -11.7 -2.95962 | opp_overlap 1352791, overlap 1352789 1352787 1352784 TGTTGTATTCAGATA TGGCGATGAACAG TCG CAGATCATCGCCA TAGTCTTATTTTGTA YE1213 1353190 - 1352849 - | hypothetical protein TERM 1498 1353061 - 1353073 + g 73 -4.9 -4.69027 | TCAAACCAGAGTCTT TTAAG GTA CTTAA TTTTTCGGTCAGTTT YE1214 1353907 - 1353347 - | hypothetical protein TERM 1499 1354010 - 1353982 - R 100 -14.7 -3.42407 | opp_overlap 1353987 1353989 1354004, overlap 1353972 1353989 ATAAATGCTAAAAAG CAAAAAACCGGCC ATA GGCCGGTCTTTTA AAGATTGGTGGAGCT TERM 1500 1353987 - 1354005 + r 91 -10.2 -4.15106 | opp_overlap 1353982 1353989, overlap 1353989 1354004 TGCTAAAAAGCAAAA AACCGGCC ATA GGCCGGTC TTTTAAAGATTGGTG TERM 1501 1354003 - 1353989 - R 100 -12.8 -5.54079 | opp_overlap 1353989 1353987, overlap 1353982 CTAAAAAGCAAAAAA CCGGCC ATA GGCCGG TCTTTTAAAGATTGG TERM 1502 1353989 - 1354003 + r 100 -12.8 -3.67 | opp_overlap 1353982 1353989, overlap 1353987 CTAAAAAGCAAAAAA CCGGCC ATA GGCCGG TCTTTTAAAGATTGG TERM 1503 1354398 - 1354379 - R 100 -9.3 -5.38321 | AAACAGCATAAAAAA GGCGACT TTACTC AGTCGCC TGATAAATGTATTTA gltX 1355832 - 1354417 - | glutamyl-tRNA synthetase TERM 1504 1355748 - 1355725 - G 71 -3.9 -4.71418 | gap 1, overlap 1355729 AATACGCAAAACAAA TTCA-CCACC GAAAT GGCGGGTGAA TAACCAGGAATACAG TERM 1505 1357184 - 1357173 - R 100 -7.2 -5.64274 | opp_overlap 1357172 1357173, overlap 1357175 GCAGGCATAAAAAAA GCGC CGTA GCGC CTTTCAGACTGCTGA TERM 1506 1357277 - 1357251 - R 73 -10.1 -2.97771 | gap 1, opp_overlap 1357256 1357257, overlap 1357250 GGTAGAAGAGTAAAG CG-TCCGCGCCA CGGA TGGCGCGGGTCG AGCCATCAGGGACGA TERM 1507 1357257 - 1357291 + r 73 -9.8 -3.06341 | opp_overlap 1357251 1357250, overlap 1357256 AGAGTAAAGCGTCCG CGCCACGGATGGCGCG GGT CGAGCCATCAGGGACG ATTTTACGGCGTCTT TERM 1508 1357357 - 1357370 + r 100 -9.5 -4.67168 | opp_overlap 1357357 GTCATTAACCTCAAA GGCGC CGTA GCGCC TTTTTAACGATTTTT TERM 1509 1357370 - 1357357 - R 78 -9.5 -3.67976 | opp_overlap 1357357 GTCATTAACCTCAAA GGCGC CGTA GCGCC TTTTTAACGATTTTT cru 1358579 - 1357395 - | nucleoside permease mntH 1358978 - 1360207 + | manganese transport protein MntH YE1220 1360686 - 1360258 - | hypothetical protein YE1221 1361846 - 1360857 - | putative ion channel protein ipdC 1362066 - 1363730 + | indole-3-pyruvate decarboxylase YE1223 1364589 - 1363702 - | LysR family transcriptional regulator TERM 1510 1363783 - 1363760 - G 82 -12.4 -3.19522 | opp_overlap 1363760 TGATCTAACAGCCAA TAGCCTGCCG GCCC CGGCGGGCTA TTTTTCGACCAAACT TERM 1511 1363760 - 1363783 + g 100 -14.6 -4.56775 | opp_overlap 1363760 TGATCTAACAGCCAA TAGCCTGCCG GCCC CGGCGGGCTA TTTTTCGACCAAACT YE1224 1364691 - 1365167 + | hypothetical protein TERM 1512 1365197 - 1365231 + F 100 -11.4 -5.03405 | overlap 1365199 CGAACCGCGATTTCT CACTTCAGCAGCGGCA ATT TACCGCTGCTGAAACG TTTTTATGTGATCTT TERM 1513 1365199 - 1365229 + F 89 -12.6 -2.75165 | overlap 1365197 AACCGCGATTTCTCA CTTCAGCAGCGGCA ATT TACCGCTGCTGAAA CGTTTTTATGTGATC glk 1365353 - 1366324 + | glucokinase TERM 1514 1366374 - 1366357 - T 100 -11.3 -5.00138 | opp_overlap 1366360 GATTGAAATGAAAAA GCAGAGC CAAG GCTCTGC TTCAGACTGCTGACA TERM 1515 1366464 - 1366438 - T 74 -7.9 -3.9749 | gap 1, opp_overlap 1366445, overlap 1366439 AGGTAGAAGAGTAAA GCGTCCGCGCCA CGGA CGGCGCGG-CTC GAGCCATCAGGGACG TERM 1516 1366455 - 1366439 - T 73 -10.1 -2.97771 | opp_overlap 1366445, overlap 1366438 GGTAGAAGAGTAAAG CGTCCGC GCC ACGGACG GCGCGGCTCGAGCCA TERM 1517 1366544 - 1366561 + T 100 -11.3 -4.72486 | opp_overlap 1366547 TGTCAATAACCTCAA GCAGAGC CAAG GCTCTGC TTTTTACAATTTATA YE1226 1367825 - 1366581 - | putative membrane transport protein TERM 1518 1366795 - 1366812 + g 77 -6.3 -4.56597 | opp_overlap 1366794 CCTTGATAGATAACG CCATAGT TTTT GCTATGG TTTTTCAGGCCAAAG YE1227 1368789 - 1368049 - | putative two-component system response-regulator YE1228 1370493 - 1368793 - | two-component system histidine kinase TERM 1519 1370618 - 1370646 + r 83 -11.7 -2.94099 | opp_overlap 1370614 1370618 1370636 1370637 GTGCTATTGAATGGA GGCTGCCGGAG AAATAAA CTCCGGCAGAC TATCTGGTGGAAGAC TERM 1520 1370646 - 1370618 - R 79 -11.7 -2.54896 | opp_overlap 1370618, overlap 1370614 1370636 1370637 GTGCTATTGAATGGA GGCTGCCGGAG AAATAAA CTCCGGCAGAC TATCTGGTGGAAGAC YE1229 1371911 - 1370664 - | hypothetical protein TERM 1521 1371667 - 1371677 + g 75 -3.2 -5.06089 | CCGAGAATAGCGCAG CAGC CCC GTTG TTTTATTTGTGCTTT YE1230 1372113 - 1372685 + | putative acetyltransferase YE1231 1372817 - 1374052 + | aminotransferase YE1232 1374220 - 1374744 + | putative B-type cytochrome TERM 1522 1374787 - 1374760 - T 95 -12.8 -3.10558 | opp_overlap 1374766, overlap 1374762 1374766 TATAGAGTTTAAAAT GATAAAGGGCGC AAAT GCGCCCTTTATA CGATGTCAGGTTGTG TERM 1523 1374785 - 1374762 - T 100 -15.4 -3.10545 | opp_overlap 1374766, overlap 1374760 1374766 TAGAGTTTAAAATGA TAAAGGGCGC AAAT GCGCCCTTTA TACGATGTCAGGTTG TERM 1524 1374781 - 1374766 - T 100 -11.8 -4.208 | opp_overlap 1374766, overlap 1374762 1374760 GTTTAAAATGATAAA GGGCGC AAAT GCGCCC TTTATACGATGTCAG TERM 1525 1374766 - 1374781 + T 100 -11.8 -3.91144 | opp_overlap 1374766 1374762 1374760 GTTTAAAATGATAAA GGGCGC AAAT GCGCCC TTTATACGATGTCAG YE1233 1375590 - 1375159 - | hypothetical protein YE1234 1376102 - 1376773 + | putative lipoprotein YE1235 1376803 - 1377159 + | putative lipoprotein YE1236 1377156 - 1377812 + | putative lipoprotein TERM 1526 1377825 - 1377853 + F 100 -15.4 -4.41348 | opp_overlap 1377825 TAAACCTCTTTAATA CTCATGCCCTGA AGTTC TCGGGGCATGAG TTTATTTCCCCAGCA TERM 1527 1377853 - 1377825 - f 100 -13.9 -3.03635 | opp_overlap 1377825 TAAACCTCTTTAATA CTCATGCCCTGAA GTT CTCGGGGCATGAG TTTATTTCCCCAGCA TERM 1528 1378672 - 1378657 - g 81 -6.1 -5.00616 | TTGTGGCGCAAAAAA CTGGG GTATTA CCCAG CAGCAATAGTCATTT YE1237 1378318 - 1378848 + | hypothetical protein TERM 1529 1378841 - 1378826 - T 91 -6.8 -5.5353 | opp_overlap 1378826 GACAGGAACAAAAAA GGCTCC AAGC GAAGCC TTTGTGATGCTGATA yfuD 1379512 - 1378874 - | putative membrane transport protein TERM 1530 1379665 - 1379649 - R 90 -7.3 -5.10461 | GTCACTCAACAAAAA TATGGGC CTG ACCCATA ATCGTCAAATCAACC sfuC 1380684 - 1379635 - | iron(III)-transport ATP-binding protein TERM 1531 1380042 - 1380018 - G 73 -7.8 -4.03234 | TCGGCCTGAGATAAA GCTCTTGCGG TGCGC CCACATGAGC CAGCTTGCCCGCGCG sfuB 1382267 - 1380681 - | iron(III)-transport system permease TERM 1532 1380918 - 1380888 - G 77 -10.2 -3.50335 | CGCCAGAAATACCAA GGCCGCACCCGCCG CTG CACCGGGGGCCGCC AGCCGCATGGTGGTG TERM 1533 1381919 - 1381909 - G 74 -6.8 -4.386 | overlap 1381910 1381912 TAACTTTGCACAAAA GCAG GCA CTGC CAGTGGGGCAATAGC sfuA 1383370 - 1382354 - | iron(III)-binding periplasmic protein TERM 1534 1382996 - 1382974 - G 82 -5.5 -5.05601 | GATTATAGACAAAAA CGGTACTGC GGGCA GCAATGCCG GTCCAGCGGCCATGT TERM 1535 1383332 - 1383309 - G 71 -4.5 -4.57569 | GCATTGGCGTAAAAA GCCAGCATC ATTGAG GAAGCTAGC AGAGCAACAGGGCCA mltB 1383664 - 1384758 + | murein hydrolase B YE1243 1386327 - 1384987 - | putative eamino acid permease YE1244 1388482 - 1386752 - | hypothetical protein YE1245 1389232 - 1388642 - | TetR family regulatory protein TERM 1536 1390528 - 1390518 - g 77 -4.6 -4.91109 | GCTCCACCAGAAAAA GCCG GTG CAGC GGGGGCCGTCGAGGG YE1246 1389366 - 1390859 + | major facilitator transporter TERM 1537 1390970 - 1390944 - f 100 -10.1 -4.46656 | gap 1, opp_overlap 1390950, overlap 1390946 1390959 GGTAGAAGAGTAAAA CG-TCCGCGCCA AGGA TGGCGCGGGTCG AGCCATCAGGGACGA TERM 1538 1390967 - 1390946 - f 79 -11.5 -2.5564 | opp_overlap 1390950, overlap 1390944 1390959 TAGAAGAGTAAAACG TCCGCGCCA AGGA TGGCGCGGG TCGAGCCATCAGGGA YE1247 1391203 - 1392348 + | ABC transporter, membrane permease YE1248 1392345 - 1393148 + | ABC transporter, ATP-binding component TERM 1539 1393202 - 1393214 + G 76 -9.1 -3.83568 | overlap 1393206 CACTCTCATTGTGGT CAGCG CCG CGCTG TTATTCTGCCTGTGG YE1249 1393149 - 1394090 + | hypothetical protein YE1250 1394087 - 1394722 + | hypothetical protein TERM 1540 1394755 - 1394792 + T 82 -8.6 -4.25283 | opp_overlap 1394757, overlap 1394758 CAATCACTTGCGTAA GAGTGGTGGCTATTTA TCTGAC TGAATAGCCACCATTA TTTTGATGAGAAAAT TERM 1541 1394758 - 1394789 + T 100 -12.5 -4.25256 | opp_overlap 1394757, overlap 1394755 TCACTTGCGTAAGAG TGGTGGCTATTTA TCTGAC TGAATAGCCACCA TTATTTTGATGAGAA YE1251 1395558 - 1394764 - | putative regulatory protein TERM 1542 1395297 - 1395313 + g 91 -2.1 -5.8901 | TTTCTTGGTATACCT GGAGCTT AGA ATGCGCC TTTTTTATTTTATCT TERM 1543 1395636 - 1395614 - R 100 -13.6 -3.03243 | opp_overlap 1395608 AGGTATTTCTTAATA GGCTCTTATT TGC AATAAGAGCC TCAGAATTATTGTTA YE1252 1396575 - 1395649 - | hypothetical protein TERM 1544 1395911 - 1395929 + g 71 -3.8 -4.80453 | overlap 1395894 GTGGTGTCCATAATA TCTTGTGG CAC CTGCGAGA TTTGTTTTCTCATCA YE1253 1396957 - 1397511 + | hypothetical protein YE1254 1397537 - 1398115 + | hypothetical protein TERM 1545 1398130 - 1398157 + T 100 -17.2 -3.14344 | opp_overlap 1398137, overlap 1398117 1398137 ATCTGCGTTGTTCTA CCTTAAAGGAGC CTAG GCTCCTTTAAGG TTAATGGCAAAGCTG TERM 1546 1398137 - 1398150 + T 70 -8.1 -3.67976 | opp_overlap 1398137, overlap 1398130 1398117 TTGTTCTACCTTAAA GGAGC CTAG GCTCC TTTAAGGTTAATGGC TERM 1547 1398150 - 1398137 - T 70 -8.1 -3.59979 | opp_overlap 1398130 1398117 1398137 TTGTTCTACCTTAAA GGAGC CTAG GCTCC TTTAAGGTTAATGGC TERM 1548 1398276 - 1398303 + T 78 -9.2 -3.62046 | opp_overlap 1398283, overlap 1398277 1398283 TGACTTTGGCATCTG TCTGAAAGGAGC TTTG GCTCCTTTGAGG TTATTGACAAAGTGC TERM 1549 1398277 - 1398302 + T 75 -10.5 -2.77013 | opp_overlap 1398283, overlap 1398276 1398283 GACTTTGGCATCTGT CTGAAAGGAGC TTTG GCTCCTTTGAG GTTATTGACAAAGTG TERM 1550 1398283 - 1398296 + T 70 -8.1 -3.72051 | opp_overlap 1398283, overlap 1398277 1398276 GGCATCTGTCTGAAA GGAGC TTTG GCTCC TTTGAGGTTATTGAC TERM 1551 1398377 - 1398403 + T 74 -7.9 -3.9749 | gap 1, opp_overlap 1398362, overlap 1398386 CGTCCCTGATGGCTC GAG-CCGCGCCG TCCG TGGCGCGGACGC TTTACTCTTCTACCT TERM 1552 1398386 - 1398402 + T 73 -10.1 -2.97771 | opp_overlap 1398362, overlap 1398377 TGGCTCGAGCCGCGC CGTCCGT GGC GCGGACG CTTTACTCTTCTACC TERM 1553 1398481 - 1398468 - T 70 -8.1 -3.58343 | opp_overlap 1398468 GTCAGCAGTCTGAAA GGAGC TTTG GCTCC TTTTTTAATATCTTA TERM 1554 1398468 - 1398481 + T 100 -8.1 -5.27399 | opp_overlap 1398468 GTCAGCAGTCTGAAA GGAGC TTTG GCTCC TTTTTTAATATCTTA ascG 1399544 - 1398513 - | putative regulatory protein ascF 1399879 - 1401345 + | cellobiose/arbutin/salicin-specific PTS system components IIBC ascB 1401361 - 1402791 + | cryptic 6-phospho-beta-glucosidase YE1258 1403195 - 1402884 - | hypothetical protein YE1259 1403854 - 1403195 - | hypothetical protein TERM 1555 1403430 - 1403444 + g 74 -4.3 -4.84492 | opp_overlap 1403430 CGTGCAAAAATAGCA TCAAC CATTT GTTGA TTTTGTTGTAATTCA TERM 1556 1403785 - 1403812 + g 71 -9.2 -3.61398 | gap 1, opp_overlap 1403793 CGCGATGCATTCTGT CACCAC-AACGGC GTT GCCCTTCGTGGTG TTCTTCACCACAACG TERM 1557 1403909 - 1403857 - R 72 -7.3 -3.97344 | opp_overlap 1403870 1403872 1403874 1403876, overlap 1403861 1403884 AAAAACCAAACATAA TGAATCTCCTTTAGATATATCGAAA ACG TTTCGATATATCTAATCTAGATCGA TATATCGAAATTAGC TERM 1558 1403905 - 1403861 - R 82 -10.3 -3.59031 | opp_overlap 1403870 1403872 1403874 1403876, overlap 1403857 1403884 ACCAAACATAATGAA TCTCCTTTAGATATATCGAAA ACG TTTCGATATATCTAATCTAGA TCGATATATCGAAAT TERM 1559 1403870 - 1403896 + r 95 -14 -2.64933 | opp_overlap 1403861 1403857 1403884, overlap 1403872 1403874 1403876 AATGAATCTCCTTTA GATATATCGAAA ACG TTTCGATATATC TAATCTAGATCGATA TERM 1560 1403872 - 1403894 + r 77 -10.8 -2.8655 | opp_overlap 1403861 1403857 1403884, overlap 1403870 1403874 1403876 TGAATCTCCTTTAGA TATATCGAAA ACG TTTCGATATA TCTAATCTAGATCGA YE1260 1404600 - 1404268 - | hypothetical protein TERM 1561 1405245 - 1405259 + r 74 -7.8 -3.91364 | opp_overlap 1405245 1405242 TCGAACCAGTAACTA GCCCTT AGG AGGGGC TTGTTATATCCGTTT TERM 1562 1405469 - 1405493 + r 74 -6.3 -4.57275 | opp_overlap 1405451, overlap 1405470 GAGCCGCTACGGCTG TGGGGGCGGTG AAT CACTGTCCACG TTTTCGCTTTTTTTA YE1262 1406371 - 1405460 - | putative inner membrane protein TERM 1563 1406424 - 1406445 + H 70 -3.7 -4.77036 | opp_overlap 1406424 CAAGCCATAAGCATA GTTGCAAAT TTTT ATTCGCGAC TTTTTGGTCATGCAG ccmA 1406645 - 1407271 + | cytochrome c biogenesis protein CcmA ccmB 1407271 - 1407930 + | heme exporter protein B ccmC 1408101 - 1408838 + | putative heme exporter protein C ccmD 1408835 - 1409080 + | putative heme exporter protein D ccmE 1409080 - 1409574 + | cytochrome c-type biogenesis protein CcmE ccmF 1409571 - 1411538 + | putative cytochrome c-type biogenesis protein ccmG 1411538 - 1412104 + | thiol:disulfide interchange protein DsbE TERM 1564 1412272 - 1412262 - g 71 -6.8 -4.2354 | overlap 1412259 1412264 TAAATGTCAAAACAA CAGC ATT GCTG ATTCCAATGCCATCA ccmH 1412197 - 1412607 + | putative cytochrome c-type biogenesis protein TERM 1565 1413446 - 1413435 - g 72 -5.8 -4.4715 | GTCGAAGTGATAAAA CGCA GTAT TGCG CAAGCGAAATCACAG vacJ 1412607 - 1413827 + | VacJ lipoprotein vacJ 1413864 - 1414628 + | VacJ lipoprotein TERM 1566 1414670 - 1414657 - f 100 -9.5 -5.72622 | opp_overlap 1414660 TCGACAAATAAAAAA GCGCC GCGA GGCGC TTGAGGTTAATGGCA TERM 1567 1414759 - 1414775 + F 73 -10.1 -2.97771 | overlap 1414758 GGGCTCGAGCCGCGC CGTCCGT GAC GCGGACG CTTTACTCTTCTACC TERM 1568 1414840 - 1414853 + F 100 -9.5 -5.19212 | TGTCAGCAGTCTGAA GCGCC GCGA GGCGC TTTTTTGCTGCTGCT YE1273 1414914 - 1415177 + | hypothetical protein TERM 1569 1415557 - 1415544 - T 100 -9.5 -5.80003 | overlap 1415546 TGAATAAATAAAAAA GCGCC GCGA GGCGC CTGAGCTTAATGACA TERM 1570 1415717 - 1415704 - T 78 -9.5 -3.58343 | opp_overlap 1415704 GTCAGCAGTCTGAAA GCGCC GCGA GGCGC TTTTTTGTGGGCAGC TERM 1571 1415704 - 1415717 + T 100 -9.5 -5.24129 | opp_overlap 1415704 GTCAGCAGTCTGAAA GCGCC GCGA GGCGC TTTTTTGTGGGCAGC fadL 1417042 - 1415768 - | long-chain fatty acid outer membrane transporter YE1275 1417467 - 1417778 + | hypothetical protein TERM 1572 1417814 - 1417834 + F 100 -11.1 -4.89063 | opp_overlap 1417814 CCGAATACCTAAAAA CGCGGAGCT TTT GGCTTCGCG TTTGTTTTTGGATGA TERM 1573 1417834 - 1417814 - f 100 -8.2 -4.74706 | opp_overlap 1417814 CCGAATACCTAAAAA CGCGGAGC TTTTG GCTTCGCG TTTGTTTTTGGATGA TERM 1574 1418013 - 1418025 + F 79 -7.7 -4.30023 | opp_overlap 1418012 TAACAATAATTAGAT CAGGT CAG ACCTG TTATTTGTTATGCTT TERM 1575 1418884 - 1418864 - g 71 -8.9 -3.60627 | GCATTTGATCGCAAA CACGGCAGT GTC ACGGCCGCG AACAGCACACCACTG fadI 1418075 - 1419385 + | 3-ketoacyl-CoA thiolase TERM 1576 1420357 - 1420333 - g 73 -2.1 -5.00884 | gap 1, overlap 1420337 1420349 ACCTCGCTGAAAAAA GAGAGTGGCG GTAAAG CGCAAC-CTC GTGCGATCCATCGTG TERM 1577 1421198 - 1421213 + G 80 -9 -4.18018 | GTTTCTACCTTTATC CCGCTA AAAG TAGCGG TTTTAAGTGGAAAAG fadJ 1419523 - 1421622 + | multifunctional fatty acid oxidation complex subunit alpha sixA 1422004 - 1422495 + | phosphohistidine phosphatase TERM 1578 1422520 - 1422543 + T 100 -12.4 -4.17309 | opp_overlap 1422519 1422520 GAGCCAATGATCAAT GGGCGCGGCA TCAC TGTCGCGCTC TTGTTATTTCTACTC YE1279 1423153 - 1422623 - | hypothetical protein TERM 1579 1422885 - 1422895 + g 73 -2.4 -5.15969 | TCGGGTGAGTAATCG CCGC GTC GCAG TTTTTTCACTTCAAA YE1280 1423360 - 1424292 + | N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase TERM 1580 1424812 - 1424798 - g 74 -2.8 -5.03314 | opp_overlap 1424798, overlap 1424800 GCTATTGCGAAAAAA TATCTG GCG CAGAAA TTTGGCGTGCAGGTG aroC 1424369 - 1425454 + | chorismate synthase mepA 1425460 - 1426287 + | penicillin-insensitive murein endopeptidase TERM 1581 1426461 - 1426486 + G 73 -3.2 -4.87892 | overlap 1426462 CAACAAGCTGCAATC TGTTGGTGGA TCATTC TCCGCCAGCC TTTATTTTATTCGCC TERM 1582 1426862 - 1426873 + G 73 -2.2 -5.14682 | ATTTCACCTCTAATC TCGG TAGC CTGA TTTTCTTTATTGTCG yfcA 1426291 - 1427097 + | hypothetical protein YE1284 1427181 - 1427723 + | hypothetical protein YE1285 1427974 - 1428249 + | hypothetical protein TERM 1583 1428265 - 1428309 + T 89 -11.4 -3.52111 | CTTCCATTGCTGAAG TCGCAGGGGTTTAGCCAGGT CCGTT ACTTGGCCTCACCTCTGCGA TTCTAGTGATTTTGA mnmC 1430397 - 1428355 - | 5-methylaminomethyl-2-thiouridine methyltransferase TERM 1584 1428943 - 1428974 + g 71 -6.5 -4.20918 | overlap 1428943 AATGTGTGACACCTG CCC-GCGCACAGCCG ACAG CGGCAG-GTGCTGGG TTTGTTGCCATTCGG fabB 1430569 - 1431792 + | 3-oxoacyl-(acyl carrier protein) synthase I TERM 1585 1431856 - 1431835 - f 73 -10.1 -2.93549 | opp_overlap 1431836, overlap 1431832 GATCGTTAATAATTA GGCCTGCGA GAGA TCGCAGGCT TTTTTATTCGCTATA TERM 1586 1431836 - 1431855 + F 100 -13.6 -5.49234 | opp_overlap 1431835 1431832 ATCGTTAATAATTAG GCCTGCGA GAGA TCGCAGGC TTTTTTATTCGCTAT TERM 1587 1432750 - 1432740 - g 91 -4 -5.60864 | TAGATATTAAAAAAA TTCT TTC AGAA ACCGATGTATTAACC YE1288 1432211 - 1433218 + | hypothetical protein YE1289 1433954 - 1433256 - | putative aspartate/glutamate racemase YE1290 1435563 - 1434169 - | hypothetical protein TERM 1588 1435386 - 1435400 + g 77 -2.8 -5.29385 | CGCTTGGTTTTTGAA TAGTAG CGG CTTCTA TTTTTTCCTTACGTT TERM 1589 1435837 - 1435816 - R 95 -13.1 -3.15544 | overlap 1435801 GCTCATCGGGATTAA TGAGCCTCA TCCC TGAGGCTCA CCCTGCGGGCAGCAT TERM 1590 1435861 - 1435887 + r 95 -13.2 -3.00704 | opp_overlap 1435867 1435868, overlap 1435863 1435867 GCAGCATAAATGCTG TACAAATCGGTT CCC GACCGATTTGTA TCTCGTTTGCCGCCT TERM 1591 1435863 - 1435885 + r 83 -11.4 -3.05769 | opp_overlap 1435867 1435868, overlap 1435861 1435867 AGCATAAATGCTGTA CAAATCGGTT CCC GACCGATTTG TATCTCGTTTGCCGC YE1291 1436254 - 1435952 - | putative PTS system protein YE1292 1437651 - 1436269 - | putative glycosyl hydrolase YE1293 1438999 - 1437668 - | putative PTS system protein YE1294 1439326 - 1439012 - | putative exported PTS system protein YE1295 1439678 - 1440634 + | LacI family transcriptional regulatory protein TERM 1592 1440672 - 1440648 - f 88 -10 -4.07885 | GATGTCTGTTTAAAA TAGCGCTGTG TCAAT CTCAGCGCTA AGCAGGGATAAAAAT TERM 1593 1441620 - 1441601 - g 73 -4.9 -4.80453 | overlap 1441604 TTAGTACAAAATAAA GAACCGG GGATTA CCGGCCC ACTAAGATTAGGTAC TERM 1594 1441890 - 1441880 - g 83 -6.8 -4.84359 | opp_overlap 1441879 TTAGCGGCACAAAAA GCCA AAT TGGC GGTGTTGGTTGGGCA YE1296 1440917 - 1442218 + | glucose-1-phosphatase/inositol phosphatase TERM 1595 1442533 - 1442554 + G 72 -5.9 -4.42386 | TATTGACGAAAGGCG TCGAGGTGA GTGG TTACTTCGA TTTTATCGGTCGGAA YE1297 1442334 - 1443467 + | putative inner membrane protein flk 1444594 - 1443557 - | flagella biosynthesis regulator TERM 1596 1444237 - 1444247 + g 71 -8.2 -3.73068 | GGATAAAATCGCTCA CCGC CTG GCGG TTATTGCCTTGGGGC scsA 1444897 - 1445253 + | putative metal resistance protein TERM 1597 1446779 - 1446791 + G 71 -9.1 -3.56727 | AATGGGCGTACTGAT GCTGG CGT CCAGC TTATGGTTACTTAGC TERM 1598 1447206 - 1447219 + G 82 -5.2 -5.08824 | overlap 1447204 TGGACGCGCCCTTCG GCGG ATATCA CCGC TTTTTTACGTGAACG scsB 1445304 - 1447364 + | putative metal resistance protein TERM 1599 1447594 - 1447580 - g 71 -6.4 -4.20367 | GCGGCGAATAAACAA GCCTTG TAT CAAGAC CCCGGCAGCCCGCGT YE1301 1447361 - 1448086 + | putative metal resistance protein YE1302 1448083 - 1448583 + | putative metal resistance protein YE1303 1450121 - 1448640 - | hypothetical protein TERM 1600 1450658 - 1450672 + G 74 -4.2 -4.85599 | TTTTGGTGTATTGCT CGGTGG GGT TTACCG TTTTTCTGGGCTGGA TERM 1601 1450933 - 1450953 + G 73 -8.4 -3.8917 | overlap 1450930 1450948 CTCTCCGCTGTGTAT CAGTTGAT ATTTA ATCAACTG TTGTTGTGGTTCCCG TERM 1602 1451324 - 1451274 - g 100 -14.3 -4.05861 | gap 1, opp_overlap 1451273 1451272, overlap 1451276 GCATAGAAAAGATAA TACTCAGGGTGAGATAGCAACACC GAAT AATAGTGCTATCTCACCCTGAG-A GCCTTTATTGCGCGG TERM 1603 1451323 - 1451276 - g 100 -19.4 -3.60562 | opp_overlap 1451273 1451272, overlap 1451274 ATAGAAAAGATAATA CTCAGGGTGAGATAGCAACACC GAAT AATAGTGCTATCTCACCCTGAG AGCCTTTATTGCGCG YE1304 1450279 - 1451322 + | putative inner membrane protein YE1305 1452213 - 1451329 - | hypothetical protein YE1306 1452386 - 1453171 + | AraC family transcriptional regulator TERM 1604 1453883 - 1453872 - g 73 -2.2 -5.06816 | ACCGCTGAATAAAAA TGGC CCTT ACCA AAGCTTGCACATGGC pdxB 1453333 - 1454460 + | putative D-isomer specific 2-hydroxyacid dehydrogenase TERM 1605 1454695 - 1454669 - f 86 -10.1 -3.9749 | gap 1, overlap 1454670 AGGTAGAAGAGTAAA GCGTCCGCGCCA CGGA TGGCGCGG-CTC GAGCCCCCAGGGAAG TERM 1606 1454696 - 1454670 - f 73 -10.1 -2.97771 | gap 1, overlap 1454669 GGTAGAAGAGTAAAG CG-TCCGCGCCA CGGA TGGCGCGGCTCG AGCCCCCAGGGAAGG TERM 1607 1454774 - 1454790 + F 74 -6.5 -4.43283 | TTGTCATTAACCTCA GGCAGTA TTT TACCGCC TTTGTCTTTGTATAA asd 1454845 - 1455855 + | putative semialdehyde dehydrogenase TERM 1608 1456340 - 1456324 - g 74 -2.9 -5.03314 | overlap 1456326 TGGATGCCGAAAAAA TGGCACA GGC TGCGCAA TGTTTGCTCGGTGAG truA 1455855 - 1456697 + | tRNA pseudouridine synthase A TERM 1609 1456787 - 1456805 + F 75 -10.4 -2.76263 | opp_overlap 1456783, overlap 1456784 AGTTCAGCTAAGCTC GCTTAATC AAA GATTAAGC TCGTTGACTACTCGA dedA 1456829 - 1457491 + | hypothetical protein TERM 1610 1457601 - 1457637 + F 90 -6 -5.4505 | gap 2, overlap 1457610 1457612 ACAATCCGAGTTAAG TGCCTTAG-T-TACGCCG CAT TGGCGTATATCTTAGGCA TTTTTTATTGGGGGG TERM 1611 1458280 - 1458266 - g 73 -5.6 -4.64766 | opp_overlap 1458273 TGCAGATGGCAAAAA CCAGTG CTG CTCTGG CTAAAATGCAAGAGC TERM 1612 1458470 - 1458448 - g 81 -7.7 -4.56775 | gap 1, opp_overlap 1458451 ACTGTGCGTGAAAAA CTGCCGCCGG GCTT CCAGC-GCAG CGAATTCTTGATTGA accD 1457722 - 1458633 + | acetyl-CoA carboxylase subunit beta TERM 1613 1458657 - 1458618 - f 100 -13 -3.48276 | gap 1, opp_overlap 1458615 1458620 1458640 1458642 1458643 GGCTGTGGCAGATAA TCCGGGTGATGCCTGATTA TCT TAA-CGGGCATCACCCTGA TAGGGTGGTGCCCGG TERM 1614 1458640 - 1458675 + F 100 -17.8 -2.78526 | gap 1, opp_overlap 1458618, overlap 1458642 1458643 GATGCCTGATTATCT TAAC-GGGCATCACCCT GAT AGGGTGGTGCCCGGTTA TCGTGTATTGTCGCA TERM 1615 1458642 - 1458672 + F 100 -17.6 -3.53546 | opp_overlap 1458618, overlap 1458640 1458643 TGCCTGATTATCTTA ACGGGCATCACCCT GAT AGGGTGGTGCCCGG TTATCGTGTATTGTC TERM 1616 1458643 - 1458671 + F 100 -21.1 -2.71405 | opp_overlap 1458618, overlap 1458642 1458640 GCCTGATTATCTTAA CGGGCATCACCCT GAT AGGGTGGTGCCCG GTTATCGTGTATTGT TERM 1617 1459039 - 1459063 + G 95 -13.5 -3.93262 | opp_overlap 1459026 1459043 CATCAAACTCCCCAA GCCACGTCGCC TTT GGCCGCGTGGC TTTACTATCTTGAGC TERM 1618 1460202 - 1460180 - g 71 -9.1 -3.57792 | TTAGTGATGTCGAAA CTGCCTGGC GTCAG GCCATGCAG GATGCAGAACCACAG dedC 1459015 - 1460283 + | bifunctional folylpolyglutamate synthase/ dihydrofolate synthase TERM 1619 1460800 - 1460788 - g 80 -4.7 -5.06414 | overlap 1460789 GTCGCTGAAGAAAAA GCGCC AGT GGGGC AGGCCTATGTCGTCC dedD 1460323 - 1461042 + | hypothetical protein TERM 1620 1461097 - 1461129 + F 100 -14.4 -4.13995 | gap 1, opp_overlap 1461094 TTTAACACTAAGTTT GTGCGGCGATTGTTA TTTT TAA-AATCGCCGCAC TTTAATTTGTCGCCG TERM 1621 1461424 - 1461434 + G 80 -6.8 -4.71426 | opp_overlap 1461423 GGTTCGTAACGGAAT TGCC ATC GGCA TTTTGTTCATCGCGA cvpA 1461233 - 1461742 + | colicin V production protein purF 1461755 - 1463272 + | amidophosphoribosyltransferase TERM 1622 1463532 - 1463503 - f 80 -6.5 -4.86621 | gap 2, opp_overlap 1463503 AGTGTGAATCAAAAA GGTGCAACCAGCG TGCAGG CGC-GG-TGCACC TTTTTTGTTGCCAAC TERM 1623 1463503 - 1463532 + F 95 -7.2 -5.4505 | gap 2, opp_overlap 1463503 AGTGTGAATCAAAAA GGTGCAACCAGCGT GCAG GCGC-GGT-GCACC TTTTTTGTTGCCAAC ubiX 1463680 - 1464252 + | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase hisJ 1464561 - 1465343 + | histidine-binding periplasmic protein TERM 1624 1465359 - 1465386 + F 100 -13.4 -3.30124 | opp_overlap 1465361 TCCCGCTTGTTGTAA CAGCCTCTGCCT AAAT AGGCAGGGGCCG TTATAGCGACTAGCC TERM 1625 1465384 - 1465361 - f 93 -12.4 -3.01712 | opp_overlap 1465359 CCGCTTGTTGTAACA GCCTCTGCCT AAAT AGGCAGGGGC CGTTATAGCGACTAG TERM 1626 1465486 - 1465540 + G 70 -9.6 -3.18383 | gap 3, overlap 1465493 1465494 GATATTTGAAGGTGC GCTGGTGA-CACTGG-AGCTAGCACTG TGCT CAGTGCT-GCTATCAGTGATTATCGGC TTAATAGGTGCCGGT TERM 1627 1465494 - 1465531 + G 72 -10.8 -2.62157 | overlap 1465493 1465486 AAGGTGCGCTGGTGA CACTGG-AGCTAGCACTG TGCT CAGTGCT-GCTATCAGTG ATTATCGGCTTAATA TERM 1628 1465992 - 1466017 + G 73 -2.5 -5.10208 | opp_overlap 1465983 TTAAAGCAACTCAGT TGGCTGGAAAG GGGA CTTATCAACCA TTTTTCTTCGCATTG hisQ 1465448 - 1466134 + | histidine transport system permease protein HisQ hisM 1466131 - 1466847 + | histidine transport system permease protein HisM hisP 1466883 - 1467680 + | histidine/lysine/arginine/ornithine transporter subunit TERM 1629 1467889 - 1467852 - f 70 -7.3 -3.77219 | opp_overlap 1467861 1467864, overlap 1467854 ATGATTTAAGTTAAA TAGATTCTATAATAAAA TTAT TTTTATTTTAGAATCTG CGCTAATGTATGCTT TERM 1630 1467887 - 1467854 - f 78 -9.9 -3.46783 | opp_overlap 1467861 1467864, overlap 1467852 GATTTAAGTTAAATA GATTCTATAATAAAA TTAT TTTTATTTTAGAATC TGCGCTAATGTATGC TERM 1631 1467861 - 1467871 + F 80 -2.6 -5.46706 | opp_overlap 1467854 1467852, overlap 1467864 GTTAAATAGATTCTA TAAT AAA ATTA TTTTTATTTTAGAAT TERM 1632 1469204 - 1469190 - g 72 -5.8 -4.45945 | ATCTATGAAGGAAAA TCAAAT AAT ATTTGA TATAGATAATTCAAA TERM 1633 1469291 - 1469349 + G 91 -13.7 -3.57561 | gap 1, opp_overlap 1469295 1469297 1469331, overlap 1469294 1469297 ACATAGTTGTGGAAA TAAATT-CCGATACTATAGTTTTCAATG TTCA CATTGAAAACTATAGTATCGATAGTGTA TTTAGAGAGTTAAAA TERM 1634 1469294 - 1469345 + G 91 -14.8 -3.24976 | opp_overlap 1469295 1469297 1469331, overlap 1469291 1469297 TAGTTGTGGAAATAA ATTCCGATACTATAGTTTTCAATG TTCA CATTGAAAACTATAGTATCGATAG TGTATTTAGAGAGTT TERM 1635 1469344 - 1469295 - g 100 -20.5 -4.41616 | opp_overlap 1469294 1469291 1469297, overlap 1469297 1469331 AGTTGTGGAAATAAA TTCCGATACTATAGTTTTCAATG TTCA CATTGAAAACTATAGTATCGATA GTGTATTTAGAGAGT TERM 1636 1469342 - 1469297 - g 100 -23.1 -2.54371 | opp_overlap 1469294 1469291 1469297, overlap 1469295 1469331 TTGTGGAAATAAATT CCGATACTATAGTTTTCAATG TTCA CATTGAAAACTATAGTATCGA TAGTGTATTTAGAGA TERM 1637 1469297 - 1469342 + G 100 -20.9 -2.80821 | opp_overlap 1469297 1469295 1469331, overlap 1469294 1469291 TTGTGGAAATAAATT CCGATACTATAGTTTTCAATG TTCA CATTGAAAACTATAGTATCGA TAGTGTATTTAGAGA TERM 1638 1469558 - 1469570 + G 71 -6.3 -4.30719 | opp_overlap 1469558 GAGCTAAAAATGCAA TCCAA ACA TTGGA TTTATTATCACAAGG TERM 1639 1470452 - 1470464 + G 73 -7.7 -4.03234 | ATTTTTACGCACAGG TTCCC CTG GGGAA TTTATATCAACAAAA TERM 1640 1471630 - 1471606 - g 74 -2.9 -5.1286 | opp_overlap 1471606, overlap 1471629 GAAAAATTAGAAAAA CATATTAAAGA TCT TCTTGAAAATG CTTTTGAGCAACGAA YE1322 1467937 - 1474269 + | putative RTX-family protein YE1323 1475248 - 1474340 - | hypothetical protein TERM 1641 1475750 - 1475736 - H 73 -7.1 -4.18494 | opp_overlap 1475736 CATCGGTATGGAAAA GAGGC CACTT GCCTC TTTCACCTTGTCATG YE1324 1475876 - 1476574 + | hypothetical protein TERM 1642 1476599 - 1476635 + F 100 -8.8 -5.44119 | overlap 1476600 TTCCATTCTATCTTG CGCAATGCTGACATTA TTCTT TTATGTCGGCATTGCA TTTTTTTACGATAAA TERM 1643 1476600 - 1476634 + F 100 -12.3 -3.85748 | overlap 1476599 TCCATTCTATCTTGC GCAATGCTGACATTA TTCTT TTATGTCGGCATTGC ATTTTTTTACGATAA TERM 1644 1476639 - 1476651 + F 70 -3.5 -4.81212 | GTCGGCATTGCATTT TTTTA CGA TAAAA TTTTCTTATGGTGGA YE1325 1476888 - 1477349 + | hypothetical protein YE1326 1477421 - 1477969 + | hypothetical protein TERM 1645 1478014 - 1477990 - T 93 -9.9 -4.33417 | opp_overlap 1477993, overlap 1477992 1477993 TTCAGCCATAATAAA TATCCTCCGGC ATA GCCGGAGGTTT TTCATATGCGCCTAT TERM 1646 1478012 - 1477992 - T 100 -12.5 -3.76888 | opp_overlap 1477993, overlap 1477990 1477993 CAGCCATAATAAATA TCCTCCGGC ATA GCCGGAGGT TTTTCATATGCGCCT TERM 1647 1478011 - 1477993 - T 100 -16 -2.8541 | opp_overlap 1477993, overlap 1477992 1477990 AGCCATAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC TERM 1648 1477993 - 1478011 + T 100 -16 -4.8048 | opp_overlap 1477993 1477992 1477990 AGCCATAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC TERM 1649 1478120 - 1478110 - T 71 -8.2 -3.53811 | opp_overlap 1478095 CTTACGGCCCGTAAA CGGG CTG CCCG GATAGGGGTTCGAGA TERM 1650 1478681 - 1478663 - T 100 -14.6 -3.07307 | opp_overlap 1478663, overlap 1478645 GAAAGCTTTACGGAA CCTCCAGC CTA GCTGGAGG TTTTCTGTGCACAAA TERM 1651 1478663 - 1478681 + T 100 -14.6 -4.52589 | opp_overlap 1478645 1478663 GAAAGCTTTACGGAA CCTCCAGC CTA GCTGGAGG TTTTCTGTGCACAAA TERM 1652 1478715 - 1478700 - T 100 -10.4 -5.24129 | TCTGTGCACAAAAAA GCCCCT TTTC AGGGGC TTCAGACTGCTGACA TERM 1653 1478908 - 1478923 + T 91 -10.4 -4.13304 | opp_overlap 1478902, overlap 1478916 1478917 TGTCATTAACCTCAA GCCCCT TTTC AGGGGC TTTTGCGCCTGCTTT ulaA 1480209 - 1478953 - | ascorbate-specific PTS system enzyme IIC TERM 1654 1479160 - 1479138 - G 75 -5.4 -4.78107 | TAGCATTACCAAAAA CTCCTGCGGC GGC GCCGACGAAG AAGTGAGGCACAACA TERM 1655 1480171 - 1480151 - G 79 -9.7 -3.82499 | ATTAAAGCGATCAAA CCAACCAGC ACC GCTGGTTCG GAAAGAACATCACTC YE1329 1480509 - 1480222 - | phosphotransferase enzyme II, B component YE1330 1480995 - 1480552 - | phosphotransferase enzyme II, A component TERM 1656 1481070 - 1481102 + H 100 -12.2 -3.96624 | overlap 1481071 1481086 TGTGATGGATCTCTC ATTTGATAGCGCTA CCTGA TAGCGCTATCAAAA TTTGTGATAGCGCTA TERM 1657 1481071 - 1481101 + H 100 -15.7 -2.97653 | overlap 1481070 1481086 GTGATGGATCTCTCA TTTGATAGCGCTA CCTGA TAGCGCTATCAAA ATTTGTGATAGCGCT TERM 1658 1481086 - 1481120 + H 100 -17.4 -3.85698 | overlap 1481071 1481070 TTTGATAGCGCTACC TGATAGCGCTATCAAA ATT TGTGATAGCGCTATCA TTTGTCACACCAAGG YE1331 1481241 - 1482266 + | LacI family transcriptional regulator TERM 1659 1482309 - 1482292 - T 89 -10.5 -3.90856 | opp_overlap 1482288, overlap 1482279 AAGCTTTGAAGGAAA GCCGCCC CGAA GGACGGC TACCTATTTTACTTG TERM 1660 1482730 - 1482744 + T 91 -4.9 -5.71712 | opp_overlap 1482730 ACCAGCGCAGAAAAA CCGTC TTTAT GGCGG TTTTTTTGTGTCCGC TERM 1661 1482791 - 1482821 + T 72 -6.1 -4.33819 | opp_overlap 1482797, overlap 1482793 1482797 TAAAAATCCGGCAAA TAAAAACGCCAGC ACGAG GCTGGCGTTGGTG TTTCTTATACATACT TERM 1662 1482815 - 1482797 - T 100 -11.7 -5.27335 | opp_overlap 1482793 1482791 1482797 TCCGGCAAATAAAAA CGCCAGC ACGAG GCTGGCG TTGGTGTTTCTTATA TERM 1663 1482797 - 1482815 + T 89 -11.7 -3.55988 | opp_overlap 1482797, overlap 1482793 1482791 TCCGGCAAATAAAAA CGCCAGC ACGAG GCTGGCG TTGGTGTTTCTTATA pta 1485001 - 1482848 - | phosphate acetyltransferase TERM 1664 1484752 - 1484774 + g 71 -7.1 -4.12902 | gap 1, opp_overlap 1484751 CTTCCATCAACACAT CTTGCTG-GT TAGA ACTCAGCAAG TTTTCCACATGATTC ack 1486361 - 1485159 - | acetate kinase TERM 1665 1485809 - 1485840 + g 77 -3.8 -5.05113 | overlap 1485810 TCACGTAGAAGTGGC TGGTA-CCGTGCGC GCCATA GCG-ACGGATACCG TTTTCTTTGTATAAG YE1335 1486794 - 1487249 + | hypothetical protein YE1336 1487418 - 1487912 + | hypothetical protein YE1337 1487953 - 1488615 + | putative phosphatase TERM 1666 1488825 - 1488842 + T 100 -12.7 -4.67038 | opp_overlap 1488820 TTGTCATTAACCTCA GAGCGCC TGAT GGCGCTC TTTTGCTTTTAGCGC YE1338 1489648 - 1488851 - | hypothetical protein YE1339 1489966 - 1491849 + | putative ion transport protein YE1340 1492612 - 1492019 - | hypothetical protein TERM 1667 1492780 - 1492755 - R 100 -16.2 -2.52464 | CGCGGCCTCAACCGA GCAGGAGGGC AGGCCG GCCCTCCTGC ACCTGCGGCTTGCGC TERM 1668 1492849 - 1492879 + r 83 -11 -3.54543 | CTGGCTGTTCGAACC GGGGCTGACTCGCT CCC AGCTCGACAGCCCC TTTCGCCGCGTCCAT TERM 1669 1493164 - 1493185 + r 84 -10.9 -3.60792 | opp_overlap 1493163 CGCAGGGGATCCAAG GGGGTTACG CGCT TGTAACCCC TTTGGCGGTTGAAGC aat 1494493 - 1493279 - | aminotransferase AlaT TERM 1670 1494295 - 1494274 - G 70 -2.2 -5.00616 | TGCGCGCCGAAAAAA GGCCTTTG GAGTCG CAATAGCC CTGTGCAGTCGGCAA TERM 1671 1495139 - 1495123 - H 79 -3 -5.37593 | opp_overlap 1495123 TTCTAAAGGAAAAAA TCTTCA TTTAT CGAAGA TTTAGCACTTTTTTA TERM 1672 1495242 - 1495261 + H 71 -10 -2.68487 | overlap 1495239 TAAGTAAATTTTTTG CCCTACTC GAAT GAGTGGGG TACTGTCATACTTAG TERM 1673 1495445 - 1495459 + G 70 -7.8 -3.87994 | TGAATACGTTTGCCT CTGCTG CGG CAGCGG TTTGTCGAACTCAGT hexA 1495357 - 1496289 + | LysR family transcriptional regulator TERM 1674 1496333 - 1496316 - f 73 -8.4 -3.6249 | opp_overlap 1496313 TATAAAACATGATAA GCCCCT TATTTT AGGGGC TTGAGGTTAATGACA TERM 1675 1496413 - 1496439 + F 86 -10.1 -3.97088 | gap 1 CTTCCCTGGGGGCTA GAG-CCGCGCCA TCCG TGGCGCGGACGC TTTACTCTTCTGCCA TERM 1676 1496503 - 1496520 + F 100 -8.4 -5.4756 | TGTCAGCAGTCTGAA GCCCCT TGTTTT AGGGGC TTTTTTGTTCCCATT TERM 1677 1496993 - 1497043 + F 84 -6.3 -4.98857 | gap 1, opp_overlap 1497004, overlap 1497004 AAAGGAGTAAAAAGC CCACAGTAAA-ACACTGGCTAAAC AGTT GTTAAGACAGTGTGTTTTGTGTGG TTTTTATCCTTCCCT TERM 1678 1497031 - 1497004 - f 74 -7 -4.35518 | opp_overlap 1497004 1496993 AAGCCCACAGTAAAA CACTGGCTAAAC AGTT GTTAAGACAGTG TGTTTTGTGTGGTTT nuoA 1497136 - 1497588 + | NADH dehydrogenase subunit A nuoB 1497746 - 1498423 + | NADH dehydrogenase subunit B TERM 1679 1498660 - 1498670 + G 80 -8.2 -4.44667 | TGTCGAACCGTTTTG GGCC AGA GGCC TTTGTTGTTCAAGCG TERM 1680 1498819 - 1498843 + G 77 -2.8 -5.32599 | gap 2, opp_overlap 1498820, overlap 1498820 1498840 AGCGCCTTCGAACCC ACCGC--CAGGG CCT CCCTGCTGCGGA TTTTTCTGTTTTCTA TERM 1681 1499919 - 1499906 - g 71 -6.7 -4.25104 | CTCCGGCTATGAAAA CTTCG ATTT CGAAG TTCCCGTCGGTAACA nuoD 1498563 - 1500359 + | bifunctional NADH:ubiquinone oxidoreductase subunit C/D TERM 1682 1500394 - 1500377 - f 71 -4.1 -4.90869 | overlap 1500379 ATGAGCAACCAAAAA GATACTC AGGT GAGTAAC GAAAGCCAAAATGTG nuoE 1500407 - 1500925 + | NADH dehydrogenase subunit E nuoF 1500922 - 1502292 + | NADH dehydrogenase I subunit F TERM 1683 1504274 - 1504284 + G 71 -8.2 -3.67173 | opp_overlap 1504266, overlap 1504263 TCAATCAGGAAGGCC GCGC TCA GCGC TTCTTCCAGGTTTAT nuoG 1502398 - 1505142 + | NADH dehydrogenase subunit G nuoH 1505139 - 1506116 + | NADH dehydrogenase subunit H nuoI 1506131 - 1506673 + | NADH dehydrogenase subunit I nuoJ 1506686 - 1507231 + | NADH dehydrogenase subunit J nuoK 1507228 - 1507530 + | NADH dehydrogenase subunit K nuoL 1507527 - 1509371 + | NADH dehydrogenase subunit L nuoM 1509390 - 1510913 + | NADH dehydrogenase subunit M TERM 1684 1510953 - 1510986 + G 71 -8.9 -3.45849 | CAACTGCAAGCAATG CTACCGCTGTTGATC GTCG GATTGACGGTGGTGG TTGTGATGCTGTCCA TERM 1685 1511156 - 1511186 + G 76 -8.2 -4.00868 | overlap 1511132 GTTCTACATCGGGCT GGTGATTGTGGCCA GTC TGGCGACCAGCACC TTTGCTTATCCGTGG nuoN 1510920 - 1512377 + | NADH dehydrogenase subunit N TERM 1686 1512429 - 1512403 - f 100 -13.7 -3.42861 | opp_overlap 1512403, overlap 1512397 1512390 AATCGACAATACCAA CCCCCTGTCAG CAACT CTGGCAGGGGG TTTTGTTTTATGGGG TERM 1687 1512403 - 1512429 + F 100 -15.9 -5.18371 | opp_overlap 1512397 1512390 1512403 AATCGACAATACCAA CCCCCTGTCAG CAACT CTGGCAGGGGG TTTTGTTTTATGGGG TERM 1688 1512645 - 1512626 - g 71 -5 -4.48713 | CCCATTAAGAATAAA TCACCAGA GCAC TCTGCTGA AATAAAGTTATCCAA TERM 1689 1513104 - 1513091 - g 73 -5.3 -4.63089 | GAGCTTAAAAAACAA GAAAG TACT CTTTC GCTAGTATCTTATAT YE1357 1512494 - 1513834 + | hypothetical protein YE1358 1513997 - 1514488 + | hypothetical protein TERM 1690 1514637 - 1514612 - f 100 -16.2 -2.52464 | TGTCGCCTCAACCGA GCAGGAGGGC TAGCCG GCCCTCCTGC TCCTGCTCCTGCGGC TERM 1691 1514843 - 1514819 - f 73 -7.3 -4.19238 | opp_overlap 1514812 CGCTCAAGGTCAAAA TCAAAACCT TGCTTTT AGGTTTTGA CGTTTAAAGCACATT TERM 1692 1515627 - 1515602 - g 80 -7.5 -4.57569 | opp_overlap 1515607 1515620, overlap 1515607 GCAGTTGGGCAAAAA CACAACCCGCC TGCC AGCGGGTCTTG AAAGTCCCTGGTGTG TERM 1693 1515622 - 1515607 - g 76 -8.2 -4.07746 | opp_overlap 1515607 1515620, overlap 1515602 TGGGCAAAAACACAA CCCGCC TGCC AGCGGG TCTTGAAAGTCCCTG YE1359 1514983 - 1516002 + | putative transposase for IS1667 TERM 1694 1516030 - 1515981 - T 100 -17.5 -3.13299 | gap 1, overlap 1515986 TCATCATACGGAATA TCGAACCTTATCCGCGGTTTGAGA TAA TCTCAAAC-ACGGACAAGGCTCAA GAACAAAAGTGAATA TERM 1695 1516025 - 1515986 - T 100 -16 -3.19789 | gap 1, overlap 1515981 ATACGGAATATCGAA CCTTATCCGCGGTTTGAGA TAA TCTCAAAC-ACGGACAAGG CTCAAGAACAAAAGT TERM 1696 1516342 - 1516363 + T 84 -10.9 -3.60792 | CGCAGGGGTTCCAAG GGGGTTACG CGCT TGTAACCCC TTTGGCGGTTGAGAC YE1361 1516949 - 1516482 - | hypothetical protein gntV 1517520 - 1516990 - | putative thermosensitive gluconokinase idnO 1518427 - 1517663 - | gluconate 5-dehydrogenase TERM 1697 1518464 - 1518446 - H 72 -7.4 -4.03978 | opp_overlap 1518446, overlap 1518463 AATTCCTGATAGAAA TGGCGCTT ATT AAGCGACA TTATAAAATAAATAT YE1364 1518810 - 1519802 + | LacI family transcriptional regulatory protein TERM 1698 1520840 - 1520854 + G 71 -4.3 -4.7373 | AAGACAGCGTTGGTC TGGTT GATAA AACCA TTTTTGCTGCGATGC YE1365 1520242 - 1521150 + | putative D-isomer specific 2-hydroxyacid dehydrogenase family protein YE1366 1521325 - 1522641 + | putative sugar transporter YE1367 1522704 - 1523210 + | hypothetical protein TERM 1699 1523844 - 1523860 + G 75 -10.1 -3.28712 | CGGCATGCACTATTG GAGGCGG AGT CTGCCTC TTATCACAGCGCCGG edd 1523214 - 1525031 + | phosphogluconate dehydratase TERM 1700 1525040 - 1525072 + T 100 -19.3 -3.54307 | opp_overlap 1525037 1525050 GTTTTAATGAGAGTT CAGCGGCAAAGGG CGCTCAC CCCTTTGCCGCTG TTTACCACCGCTATT YE1369 1526504 - 1525083 - | putative dehydrogenase, cytochrome C subunit YE1370 1528153 - 1526501 - | putative dehydrogenase subunit TERM 1701 1527292 - 1527310 + g 93 -4.5 -5.55769 | GCGCGAACACTTTGC CAGTCGC TTGAT GAGACTG TTTTTTGTTATCCAG YE1370A 1528734 - 1528153 - | putative dehydrogenase subunit elaB 1529089 - 1529397 + | hypothetical protein TERM 1702 1530452 - 1530425 - g 75 -11.4 -2.53422 | overlap 1530424 1530423 TATTGGGAGAAAATG CTTCTTACACCG GAGG CGGTGCAAAAAG TGATGCGGTGAGCGG TERM 1703 1531482 - 1531469 - g 80 -6.7 -4.77165 | opp_overlap 1531468 1531475, overlap 1531464 CTGGCGATAATAAAA GCTAC GGTG GTAGC CTCTATAGTTCCTGG YE1372 1529782 - 1532073 + | putative autotransporter protein TERM 1704 1532103 - 1532122 + F 90 -11.4 -3.6106 | overlap 1532121 TTTAATCCATTTTAA GGGCAGGG TTAT TCCTGCCC TTTCCCCCTATTAAG menF 1532262 - 1533620 + | menaquinone-specific isochorismate synthase TERM 1705 1533629 - 1533613 - f 71 -4.4 -4.77567 | opp_overlap 1533625, overlap 1533615 1533625 AGTCTGATAATAAAA TGCAGT AATTG ACCGCA CTCACTGAGTTGTTA TERM 1706 1533966 - 1533990 + G 71 -7 -4.0044 | overlap 1533967 1533969 ACGCCGCTCACCTTG GCGGCGGCGG CTAAT CCGTCGCTGG TTTGTCATACTCATT TERM 1707 1533967 - 1533989 + G 72 -10.5 -2.99541 | overlap 1533966 1533969 CGCCGCTCACCTTGG CGGCGGCGG CTAAT CCGTCGCTG GTTTGTCATACTCAT TERM 1708 1534796 - 1534827 + G 74 -11 -2.89881 | gap 1, overlap 1534799 CATAGCGGGTCGTCT TGATCCGGCGAATCA CCG TGGT-CGCCGGATTA TCTCTCCGGTGAATG TERM 1709 1534799 - 1534824 + G 77 -10.5 -3.59698 | gap 1, overlap 1534796 AGCGGGTCGTCTTGA TCCGGCGAATCA CCG TGGT-CGCCGGA TTATCTCTCCGGTGA TERM 1710 1535297 - 1535311 + G 77 -4.2 -5.10461 | opp_overlap 1535298, overlap 1535298 GCTTCCGACACCAGA AGCTGA CCG TCAGCG TTTTTATTGCATGCC menD 1533849 - 1535522 + | 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase YE1376 1535609 - 1536343 + | acyl-CoA thioester hydrolase YfbB menB 1536357 - 1537214 + | naphthoate synthase TERM 1711 1537710 - 1537688 - g 74 -9.8 -3.59979 | TTGCCTGATTTGAAA CTGCGGCTGG ATG CCAATCGCAG TTGGACGCGGGCTAA menC 1537214 - 1538185 + | O-succinylbenzoate synthase menE 1538356 - 1539594 + | O-succinylbenzoic acid--CoA ligase katA 1541232 - 1539790 - | catalase YE1381 1541620 - 1542129 + | hypothetical protein TERM 1712 1542155 - 1542180 + T 100 -12.7 -5.24799 | gap 1, opp_overlap 1542155 TTTTCTGTAAAAAAA GGCGCAT-TCCT GAC AGGATATGCGCC TTTTTGTCTTTATGG TERM 1713 1542180 - 1542155 - T 100 -12.7 -5.40072 | gap 1, opp_overlap 1542155 TTTTCTGTAAAAAAA GGCGCAT-TCCT GAC AGGATATGCGCC TTTTTGTCTTTATGG tyrP 1543410 - 1542202 - | tyrosine-specific transport protein YE1383 1543640 - 1544833 + | competence damage-inducible protein A TERM 1714 1544899 - 1544846 - f 76 -10.7 -2.65388 | gap 1, opp_overlap 1544846 1544862, overlap 1544862 TAGTTAATCGATAAT TTCTGTTAATTAAAAAGGCGCATATT TTA AAT-TGCGCCTTTTTAATTAAGCGCA TATTATTTATTATCC TERM 1715 1544846 - 1544899 + F 84 -10.7 -3.73122 | gap 1, opp_overlap 1544846 1544862, overlap 1544862 TAGTTAATCGATAAT TTCTGTTAATTAAAAAGGCGCATATT TTA AAT-TGCGCCTTTTTAATTAAGCGCA TATTATTTATTATCC TERM 1716 1544883 - 1544862 - f 91 -8.1 -4.8622 | gap 1, opp_overlap 1544846 1544862, overlap 1544846 TCTGTTAATTAAAAA GGCGCATATT TTA AAT-TGCGCC TTTTTAATTAAGCGC TERM 1717 1544862 - 1544883 + F 91 -8.1 -4.8622 | gap 1, opp_overlap 1544862 1544846, overlap 1544846 TCTGTTAATTAAAAA GGCGCATATT TTA AAT-TGCGCC TTTTTAATTAAGCGC YE1386 1545840 - 1546622 + | hypothetical protein TERM 1718 1547278 - 1547268 - g 74 -4 -4.86731 | opp_overlap 1547268 TGCCGTTAAAGAAAA GATA TTA TATC TGTGATGCCATTTTT YE1387 1546634 - 1547410 + | hypothetical protein YE1388 1547422 - 1548207 + | hypothetical protein TERM 1719 1549203 - 1549213 + G 83 -8.2 -4.49556 | CCCAGTTATATGCTG CCGG AAA CCGG TTTATTTGATGCGGC TERM 1720 1553523 - 1553533 + G 71 -6.8 -4.25256 | ATTGTCCCGCTGATT GACG CAA CGTC TTATTTTGATAACCC YE1389 1548219 - 1553630 + | putative serine protease TERM 1721 1553669 - 1553690 + T 73 -7.3 -4.08216 | opp_overlap 1553671 TCCACTGCTTTTCAA TACCCACTC AGTT GAATGGGTA TTTTGACAAGGCTAA eco 1554233 - 1553727 - | ecotin precursor YE1391 1554737 - 1554492 - | 2Fe-2S ferredoxin YfaE nrdB 1556007 - 1554877 - | ribonucleotide-diphosphate reductase subunit beta dnaF 1558378 - 1556093 - | ribonucleotide-diphosphate reductase subunit alpha TERM 1722 1557487 - 1557470 - G 73 -8.4 -3.7941 | CATTGGGTAGAACAA CGTGGC CGCACC GCCACG TACACCGCCCTGCGA TERM 1723 1557891 - 1557902 + g 71 -7.2 -4.08394 | CTTTCATAGATCTCG CCGC TGAC GCGG TTTTGCACCAAATAT pufX 1559623 - 1558895 - | 3-demethylubiquinone-9 3-methyltransferase gyrA 1559825 - 1562482 + | DNA gyrase subunit A TERM 1724 1562494 - 1562511 + F 100 -11.3 -5.31877 | opp_overlap 1562494 1562491 1562489 GTAAATGAAATAGGA GCCAGCT TACG AGCTGGC TTTTTTATGCTGACT TERM 1725 1562511 - 1562494 - f 83 -11.3 -2.92386 | opp_overlap 1562494, overlap 1562491 1562489 GTAAATGAAATAGGA GCCAGCT TACG AGCTGGC TTTTTTATGCTGACT rcsC 1562600 - 1565467 + | hybrid sensory kinase in two-component regulatory system with RcsB and YojN TERM 1726 1565640 - 1565616 - T 100 -17.9 -4.33248 | overlap 1565605 GAAGGGGATAATAAA CCCGGCACTGC TGA GCAATGCCGGG TTGGGGAACAGAAGT rcsB 1566302 - 1565655 - | transcriptional regulator RcsB TERM 1727 1565907 - 1565918 + g 77 -3 -5.24449 | CAGCTTAGCCACACT TTCA GGGG TGAA TTTTTTCCCTTTCTG YE1398 1568998 - 1566305 - | phosphotransfer intermediate protein in two-component regulatory system with RcsBC TERM 1728 1568687 - 1568677 - G 75 -5.4 -4.77036 | opp_overlap 1568677 1568680 1568682, overlap 1568680 CGTGATTACCAAAAA TGAC GGC GTCA GTTTTTCTGCGCGGT YE1399 1570175 - 1569021 - | hypothetical protein TERM 1729 1569599 - 1569609 + g 75 -3.2 -5.08088 | GAGGTTCTCCGCTGC CTTG TAA CAGG TTTTTATTGGCAGTT TERM 1730 1571238 - 1571258 + H 80 -2.5 -5.42862 | opp_overlap 1571239, overlap 1571239 AGGAATCATTGAGAG AGCGTTAAT ATT ATTACCGCA TTTTTTTGCCCCTAT TERM 1731 1571521 - 1571505 - H 100 -13.7 -5.4833 | GCAGGCAATAAAAAA GCCGGTC AAA GACCGGC CGTAACACTAACGAA meoA 1571913 - 1573016 + | outer membrane porin protein C TERM 1732 1573063 - 1573046 - T 82 -8.3 -4.3739 | opp_overlap 1573046 TAGGTTCTGATAAAA CGCGGTC ACTT GGCCGCG TTTTTTGTGCCTGCT TERM 1733 1573046 - 1573063 + T 100 -10.5 -5.28778 | opp_overlap 1573046 TAGGTTCTGATAAAA CGCGGTC ACTT GGCCGCG TTTTTTGTGCCTGCT TERM 1734 1573473 - 1573447 - T 100 -15.3 -4.45544 | opp_overlap 1573447 CGGCACCAATTAAAA GCCCGTTATCT GCATA AGATAACGGGC TTTTTGCTTTCCGAC TERM 1735 1573447 - 1573473 + T 100 -15.3 -4.98531 | opp_overlap 1573447 CGGCACCAATTAAAA GCCCGTTATCT GCATA AGATAACGGGC TTTTTGCTTTCCGAC ampH 1574673 - 1573531 - | beta-lactamase/D-alanine carboxypeptidase TERM 1736 1574189 - 1574207 + g 91 -6.7 -5.24129 | gap 1, opp_overlap 1574203 CGGTTATCTTTGGTC GGCCAGGT AAAT ACC-GGCC TTTTTTGTGGGCCGC TERM 1737 1574834 - 1574800 - R 100 -14.4 -3.73224 | opp_overlap 1574805, overlap 1574805 GGAGTGGCGAGGAAA CCAAACCGCAACGA AGTCGGG CCGCTGCGGTTTGG GGTGACAATCTTATT TERM 1738 1574829 - 1574805 - R 73 -7.1 -4.10552 | opp_overlap 1574805, overlap 1574800 GGCGAGGAAACCAAA CCGCAACGA AGTCGGG CCGCTGCGG TTTGGGGTGACAATC YE1403 1576325 - 1574853 - | putative transport protein YE1404 1576769 - 1577782 + | hypothetical protein TERM 1739 1577826 - 1577782 - T 100 -15.2 -3.0752 | gap 1, opp_overlap 1577776 GATATTACTTGAATA GCGTTGTGTTTCAGCGGGTTA AAGG TCACCCGCTGAAAC-CAACGA AAGTACATGCTATTG cheD2 1579639 - 1577852 - | putative methyl-accepting chemotaxis protein TERM 1740 1578483 - 1578514 + g 78 -11.6 -2.94293 | gap 1, overlap 1578479 GAGATTTGTTCTAAT GCCGCCG-AGGTTTG TTG CAAACTGGCGGCGGC TGATTCTGTTCGGCC TERM 1741 1579892 - 1579943 + r 100 -15.4 -3.21099 | gap 1, opp_overlap 1579893 1579894, overlap 1579894 1579896 1579903 CATTTAAACTGCAAA AT-CAGCATCAATCTCGCTGAAAGG GGG CGTGTCAGCGAGATTGATGCTGTAA TTGGTGATGACGAGG TERM 1742 1579941 - 1579893 - R 100 -20.5 -4.24404 | opp_overlap 1579892 1579894 1579896 1579903, overlap 1579894 ATTTAAACTGCAAAA TCAGCATCAATCTCGCTGAAAGG GGG CGTGTCAGCGAGATTGATGCTGT AATTGGTGATGACGA TERM 1743 1579894 - 1579940 + r 100 -24 -2.80016 | opp_overlap 1579894 1579893, overlap 1579892 1579896 1579903 TTTAAACTGCAAAAT CAGCATCAATCTCGCTGAAAGG GGG CGTGTCAGCGAGATTGATGCTG TAATTGGTGATGACG TERM 1744 1579940 - 1579894 - R 100 -24 -3.13919 | opp_overlap 1579892 1579894 1579896 1579903, overlap 1579893 TTTAAACTGCAAAAT CAGCATCAATCTCGCTGAAAGG GGG CGTGTCAGCGAGATTGATGCTG TAATTGGTGATGACG TERM 1745 1579896 - 1579938 + r 100 -20.8 -2.94695 | opp_overlap 1579894 1579893, overlap 1579894 1579892 1579903 TAAACTGCAAAATCA GCATCAATCTCGCTGAAAGG GGG CGTGTCAGCGAGATTGATGC TGTAATTGGTGATGA TERM 1746 1579903 - 1579931 + r 78 -10.3 -3.26433 | opp_overlap 1579894 1579893, overlap 1579896 1579894 1579892 CAAAATCAGCATCAA TCTCGCTGAAAGG GGG CGTGTCAGCGAGA TTGATGCTGTAATTG TERM 1747 1581034 - 1581053 + r 70 -7.8 -3.58428 | opp_overlap 1581034 1581031, overlap 1581031 1581030 TCAAACTTAATATGA GCCGGG CTTGGTTA CCCGGC TTAATTGTGTTTAAA dinI 1581306 - 1581064 - | putative stress response protein TERM 1748 1581426 - 1581452 + r 74 -7.9 -3.9749 | gap 1, overlap 1581425 CCTCCCTGGGGGCTC GAG-CCGCGCCG TCCC TGGCGCGGACGC TTTACTCTTCTACCT TERM 1749 1581650 - 1581613 - R 100 -11.5 -5.38047 | opp_overlap 1581613 TAGTGATATAAAAAA TAACCGCAGGTGATT TTATGGCT AATCACTTGCGGTTA TTTTTATGCGAGATT TERM 1750 1581613 - 1581650 + r 100 -13.7 -4.84017 | opp_overlap 1581613 TAGTGATATAAAAAA TAACCGCAGGTGATT TTATGGCT AATCACTTGCGGTTA TTTTTATGCGAGATT YE1409 1582461 - 1581739 - | putative prophage repressor protein TERM 1751 1582760 - 1582750 - g 77 -8.2 -4.19336 | AATGAGTTCAATAAA CGGC AAC GCCG CTGGCAGCCATAGCC YE1410 1582736 - 1583215 + | phage antitermination protein Q TERM 1752 1583278 - 1583248 - f 75 -9.1 -3.68836 | gap 1, opp_overlap 1583248 1583250, overlap 1583250 1583255 ACACTGATTGAATAA CAGGAAAGCCCGCA TTGT CG-GGGCTTTCCTA TTTCTGTTGGTTTTA TERM 1753 1583248 - 1583278 + F 74 -6.9 -4.3341 | opp_overlap 1583248 1583250 1583255, overlap 1583250 ACACTGATTGAATAA CAGGAAAGCCC GCATTGTCG GGGCTTTCCTA TTTCTGTTGGTTTTA TERM 1754 1583276 - 1583250 - f 76 -9.5 -3.42256 | gap 1, opp_overlap 1583248 1583250, overlap 1583248 1583255 ACTGATTGAATAACA GGAAAGCCCGCA TTGT CG-GGGCTTTCC TATTTCTGTTGGTTT TERM 1755 1583250 - 1583276 + F 81 -9.5 -3.74137 | opp_overlap 1583250 1583248 1583255, overlap 1583248 ACTGATTGAATAACA GGAAAGCCC GCATTGTCG GGGCTTTCC TATTTCTGTTGGTTT YE1411 1583325 - 1583603 + | putative bacteriophage protein TERM 1756 1585524 - 1585557 + G 74 -11.1 -3.02144 | opp_overlap 1585532 1585535 ATATCTTATCTGACG TTAGCAGAGAATGTC TTAA GACACTCTCCGCTAA TATTGCGACGAATAG tpn1330 1584441 - 1585634 + | transposase for IS1330 YE1415 1585808 - 1586548 + | LacI family regulatory protein TERM 1757 1586557 - 1586539 - f 81 -5.2 -5.11063 | opp_overlap 1586539, overlap 1586546 ATTAGTTAATAAAAA CACCCAAT AAA ACAGGGTG TTTTTTACATGTTAC TERM 1758 1586539 - 1586557 + F 75 -3.1 -5.1615 | opp_overlap 1586539 1586546 ATTAGTTAATAAAAA CACCC AATAAAACA GGGTG TTTTTTACATGTTAC YE1416 1586713 - 1588254 + | putative PTS-system permease TERM 1759 1589702 - 1589689 - g 77 -4.5 -4.84359 | overlap 1589690 CTACGTGGATAAAAA CGATG ACGG CACCG GCACCATGGCGCGTT bglA 1588343 - 1589779 + | 6-phospho-beta-glucosidase YE1418 1591555 - 1590524 - | putative O-methyltransferase TERM 1760 1591157 - 1591143 - G 77 -5 -4.88736 | opp_overlap 1591143 1591145 1591155 CAGTATTCATAAAAA GACATT CCG AATGCC TTTTTAAAGGCTGAT TERM 1761 1591914 - 1591881 - R 100 -14.1 -3.95219 | opp_overlap 1591889, overlap 1591889 GTCAAATCCTACAAA CAAAAAAACCAACCC TAAC GGATTGGTTTTCTTG GGGATATTTGGTCGG TERM 1762 1591889 - 1591906 + r 73 -5.5 -4.65078 | opp_overlap 1591881 1591889 CTACAAACAAAAAAA CCAACCC TAAC GGATTGG TTTTCTTGGGGATAT TERM 1763 1591906 - 1591889 - R 100 -7.7 -6.02919 | opp_overlap 1591889, overlap 1591881 CTACAAACAAAAAAA CCAACCC TAAC GGATTGG TTTTCTTGGGGATAT YE1419 1593890 - 1592097 - | hypothetical protein TERM 1764 1593471 - 1593458 - G 71 -3.1 -4.91109 | gap 1 TCTCGACCAGAAAAA TGACCG GCA CGG-CA ATAAACATCAATTGC YE1420 1594145 - 1593918 - | hypothetical protein YE1421 1594323 - 1595324 + | nucleoid-associated protein NdpA TERM 1765 1595344 - 1595373 + T 100 -18.1 -3.57144 | opp_overlap 1595351, overlap 1595351 AGTTTGAATTGCCAA TAAAAAACGCCGC ATAA GCGGCGTTTTTTA TTTCGGCGTCCCGAA TERM 1766 1595366 - 1595351 - T 100 -11.8 -5.45652 | opp_overlap 1595351 1595344 ATTGCCAATAAAAAA CGCCGC ATAA GCGGCG TTTTTTATTTCGGCG TERM 1767 1595351 - 1595366 + T 100 -11.8 -5.63517 | opp_overlap 1595351, overlap 1595344 ATTGCCAATAAAAAA CGCCGC ATAA GCGGCG TTTTTTATTTCGGCG rplY 1595693 - 1595406 - | 50S ribosomal protein L25 TERM 1768 1595681 - 1595692 + g 77 -3 -5.26907 | TACGTACTTCTGCTT TGAT AGTG ATCA TTTTGTTTTCTCTTA YE1423 1597612 - 1595855 - | putative DEAD box helicase family protein TERM 1769 1597470 - 1597459 - G 73 -7.2 -4.30576 | overlap 1597460 GCGCCAGCACTAAAA CGCG CCCG CGCG CCAGTTTGGCTAATT rsuA 1597953 - 1598660 + | 16S rRNA pseudouridylate synthase A TERM 1770 1598675 - 1598701 + F 73 -7.2 -4.21098 | overlap 1598677 ATTGATGTTCTATTG CTGTGTGGAGCC CTT GTTTCCACACTG TTTTGCCGTTGATAT TERM 1771 1598677 - 1598699 + F 73 -8.4 -3.70019 | overlap 1598675 TGATGTTCTATTGCT GTGTGGAGCC CTT GTTTCCACAC TGTTTTGCCGTTGAT bcr 1598810 - 1599982 + | bicyclomycin/multidrug efflux system TERM 1772 1599998 - 1600032 + F 77 -6.5 -4.63048 | gap 2, opp_overlap 1599998 1599999, overlap 1599999 CCTTATTGAATAGAA TGTGAAGGGTAGACGCC CTT GG-GACT-CCCTTCACG TTTATTATTTGTAAC TERM 1773 1600478 - 1600463 - f 95 -7.6 -5.00412 | AAATATAACGAAAAA TGGGAT CTAA ATCCCA AACCGGCAGTCTCAA YE1426 1600698 - 1601045 + | hypothetical protein YE1427 1602709 - 1601117 - | putative ABC transporter ATP-binding subunit TERM 1774 1601187 - 1601173 - G 71 -4.2 -4.72272 | opp_overlap 1601173, overlap 1601174 TTGGCGCAGCAAAAA TGGACT GGC AGTCCC CTTGTTCCACCACCT TERM 1775 1602607 - 1602591 - G 79 -10.1 -3.72893 | opp_overlap 1602591 1602590 GACTCCCCGACCAAA GCCAGTG TCT CACCGGC ATCTATTTGCAATGA YE1428 1603739 - 1602711 - | putative ABC transporter integral membrane subunit TERM 1776 1603686 - 1603656 - G 75 -6 -4.62904 | overlap 1603659 AAACAGTGTCAAAAA GATCCACAGTGACC AAT AGCCACGGCGGTTC TGGCGAAACCGCGCC YE1429 1604836 - 1603736 - | putative ABC transporter integral membrane subunit YE1430 1606654 - 1604846 - | putative substrate-binding transport protein TERM 1777 1606041 - 1606057 + g 87 -10.9 -4.1043 | overlap 1606037 CTGACCGGCGGCTGA CTCAGTG GGT CACTGAG TTTATGATCTTTCCA YE1431 1608315 - 1606753 - | hypothetical protein TERM 1778 1608759 - 1608774 + G 82 -10.4 -3.90684 | opp_overlap 1608759 TTCGGCAATAAAAAA CGCTGC CGAG GCAGCG TTTCATCGTTTCGTT TERM 1779 1608774 - 1608759 - g 100 -10.4 -5.4505 | opp_overlap 1608759 TTCGGCAATAAAAAA CGCTGC CGAG GCAGCG TTTCATCGTTTCGTT YE1432 1608604 - 1608813 + | hypothetical protein spr 1609405 - 1608821 - | putative outer membrane lipoprotein TERM 1780 1609235 - 1609287 + g 76 -9.1 -3.80142 | opp_overlap 1609233 TGCTTCGAATTCATC CTGAGAGGCTTGCAGTAAAAGCCCA TCT TTGTCATTAACTGCACGCATCTCAG TTTGCGTATTATGTA TERM 1781 1609529 - 1609514 - R 70 -5.4 -4.57304 | ACTTAACCAAATAAA TGTGCA GGAA CGCACA ATATAAATCAGACTA TERM 1782 1609768 - 1609732 - R 89 -12.6 -2.74514 | opp_overlap 1609738 1609740, overlap 1609740 TGAAAGCGTTAATTA CTGATAGAGCAAAAAA TAGGC TTTTTTGCTCTATCAT AAAGCAGAATTCGGG TERM 1783 1609738 - 1609762 + r 75 -10.2 -2.78384 | opp_overlap 1609732 1609740, overlap 1609740 CGTTAATTACTGATA GAGCAAAAAA TAGGC TTTTTTGCTC TATCATAAAGCAGAA YE1434 1610485 - 1609784 - | hypothetical protein YE1435 1611532 - 1610549 - | putative cobalamin synthesis protein YE1436 1611844 - 1612170 + | hypothetical protein TERM 1784 1612197 - 1612231 + F 100 -11.6 -4.69464 | opp_overlap 1612201, overlap 1612201 CAATTAATCATCCTA TAAACACGGCTTATTA CAC TGATAAGCCGTGTTAG TTTTTCGGATGTTTT TERM 1785 1612201 - 1612227 + F 100 -14.6 -3.81926 | opp_overlap 1612201, overlap 1612197 TAATCATCCTATAAA CACGGCTTATTA CAC TGATAAGCCGTG TTAGTTTTTCGGATG TERM 1786 1612227 - 1612201 - f 100 -12.4 -3.91032 | opp_overlap 1612201 1612197 TAATCATCCTATAAA CACGGCTTATTA CAC TGATAAGCCGTG TTAGTTTTTCGGATG YE1437 1612378 - 1613121 + | putative transcriptional regulatory protein YE1438 1614887 - 1613415 - | putative D-mannonate oxidoreductase YE1439 1615240 - 1614962 - | hypothetical protein TERM 1787 1615091 - 1615079 - G 79 -3.4 -5.23292 | opp_overlap 1615079 TGACAGAAAATAAAA TTGG TAAGT CCAA TATTGATTATATTCG TERM 1788 1616272 - 1616260 - g 85 -7.7 -4.75776 | AAGGGAACCCAAAAA CCTTC CAC GAAGG CGGTCACCTGCAAGG TERM 1789 1616446 - 1616422 - g 83 -6.5 -4.84914 | gap 1, opp_overlap 1616422 ATTTACATAAGAAAA CCAATC-CGG GCTATT CCGCGATTGG TCGGTTGAAAGGGTT uxuA 1615332 - 1616522 + | mannonate dehydratase TERM 1790 1616535 - 1616572 + T 100 -18.1 -2.88249 | gap 1, opp_overlap 1616542 1616546, overlap 1616542 TAACCCGTCATATTT CAATATATTAAGGGCCGA AAA TCGGCCCTTAAT-TATTG TATATCCAAACTATA TERM 1791 1616542 - 1616566 + T 100 -17.3 -3.92996 | opp_overlap 1616542 1616546, overlap 1616535 TCATATTTCAATATA TTAAGGGCCGA AAA TCGGCCCTTAA TTATTGTATATCCAA TERM 1792 1616566 - 1616542 - T 100 -17.3 -3.09785 | opp_overlap 1616542 1616535, overlap 1616546 TCATATTTCAATATA TTAAGGGCCGA AAA TCGGCCCTTAA TTATTGTATATCCAA TERM 1793 1616562 - 1616546 - T 100 -13.7 -3.37761 | opp_overlap 1616542 1616535, overlap 1616542 ATTTCAATATATTAA GGGCCGA AAA TCGGCCC TTAATTATTGTATAT YE1441 1617281 - 1616709 - | elongation factor P mtr 1618638 - 1617394 - | putative tryptophan-specific transport protein TERM 1794 1618514 - 1618491 - G 73 -8.2 -3.92075 | gap 1 ACGCCCACGTATAAA TCAGCAGCATC ACT GA-GCCGCTGA ACCATACCCCCGCCG YE1443 1618976 - 1619230 + | hypothetical protein TERM 1795 1619312 - 1619286 - T 73 -10.1 -2.97771 | gap 1, overlap 1619285 GGCAGAAGAGTAAAG CG-TCCGCGCCA GGGA TGGCGCGGGTCG AGCCCCCAGGGAAGG torA 1621882 - 1619402 - | putative molybdopterin-containing oxidoreductase TERM 1796 1620294 - 1620277 - G 74 -6.9 -4.45168 | TCGGGAAAACATAAA GCTGCGA ATAG TCGCCGC CCATTTCCAAATCGT TERM 1797 1620504 - 1620519 + g 73 -7.6 -4.09739 | TAGGTCACTTTGGTG CCATTG AAAT CAATGG TTTTGCCCGGATTCG TERM 1798 1621392 - 1621423 + g 70 -2.2 -4.84359 | gap 1, opp_overlap 1621396, overlap 1621396 CTTTTCCAGCCATAA GAAC-CGGCATACAG CGC TTGTGGGCCGTGGTC TTTTTGTACCCGTAC torC 1623044 - 1621896 - | cytochrome C-type protein TERM 1799 1622571 - 1622593 + g 77 -10.6 -3.5627 | TTTGATGGCGACAGG GTGCTGAATC CGT GCTTCAGCAC TTTGCCCAGTGATAT YE1446 1623768 - 1623346 - | putative Mut family protein TERM 1800 1624764 - 1624780 + G 73 -7.3 -4.21194 | overlap 1624755 1624748 TGCTGACACTGTCAG TGGTTGA TGA TCAGCCA TTTTCGGTGCTGAAC fpr 1624049 - 1625182 + | bifunctional fructose-specific PTS IIA/HPr protein TERM 1801 1625380 - 1625392 + G 73 -3.3 -4.87133 | opp_overlap 1625380 GGCAAAGATAACCAA GATGG CTT CCAGC TTTTATTTAGCGAAT TERM 1802 1626016 - 1626026 + G 71 -8.2 -3.70902 | overlap 1626014 1626017 TTGCGCCTGGCAACC GCCG TCG CGGC TTTGGCTGTCAGCCA fruK 1625179 - 1626117 + | 1-phosphofructokinase TERM 1803 1627187 - 1627199 + G 71 -9.1 -3.48474 | overlap 1627183 1627176 1627192 GATATTGATCATCCC GCTGG TCG CCAGC TTGATTGTCGGTTTG fruA 1626132 - 1627817 + | fructose-specific PTS system IIBC component TERM 1804 1627854 - 1627881 + F 100 -8.5 -5.65678 | opp_overlap 1627853 AAGATTATTAATCAG TGCCAGTCAGT TAAAAT GTTGACTGGCA TTTTTTATATTTTCT myfE 1628085 - 1628750 + | putative regulatory protein myfF 1628747 - 1629238 + | hypothetical protein TERM 1805 1629292 - 1629318 + F 100 -13.8 -5.28176 | opp_overlap 1629292 ATAAAAGATAAAAAA GCAGGATATCTC GCT GAGCTATCCTGC TTTTTTATGCGTCAG TERM 1806 1629318 - 1629292 - f 100 -13.8 -5.65678 | opp_overlap 1629292 ATAAAAGATAAAAAA GCAGGATATCTC GCT GAGCTATCCTGC TTTTTTATGCGTCAG myfA 1629499 - 1629978 + | pH 6 antigen precursor (antigen 4) (adhesin) TERM 1807 1630013 - 1630050 + F 100 -15.1 -2.89304 | opp_overlap 1630013 1630021, overlap 1630016 1630021 GTATAGCCTAACTGA GAGGAAAACATGGCAAT ATGT ATTGCCATGTTTTCTGC GTTGTCTATTTTACA TERM 1808 1630050 - 1630013 - f 90 -12.9 -2.54523 | opp_overlap 1630013 1630016 1630021, overlap 1630021 GTATAGCCTAACTGA GAGGAAAACATGGCAAT ATGT ATTGCCATGTTTTCTGC GTTGTCTATTTTACA TERM 1809 1630016 - 1630047 + F 100 -17.6 -2.68009 | opp_overlap 1630013 1630021, overlap 1630013 1630021 TAGCCTAACTGAGAG GAAAACATGGCAAT ATGT ATTGCCATGTTTTC TGCGTTGTCTATTTT TERM 1810 1630021 - 1630042 + F 100 -11.7 -4.49939 | opp_overlap 1630013 1630021, overlap 1630016 1630013 TAACTGAGAGGAAAA CATGGCAAT ATGT ATTGCCATG TTTTCTGCGTTGTCT TERM 1811 1630042 - 1630021 - f 100 -11.7 -4.36931 | opp_overlap 1630021 1630016 1630013, overlap 1630013 TAACTGAGAGGAAAA CATGGCAAT ATGT ATTGCCATG TTTTCTGCGTTGTCT TERM 1812 1630136 - 1630148 + G 75 -3.5 -5.1502 | AATTCTCTCACAACT TTATA AGT TATAA TTTATTTTTATTTGT TERM 1813 1630382 - 1630395 + G 70 -8.1 -3.94188 | opp_overlap 1630366 CGCCAGCGCCTTTTA TGGCG ACTC CGCCA TTATTTCGCCTGGAT myfB 1630111 - 1630914 + | chaperone protein TERM 1814 1631188 - 1631178 - g 80 -6.8 -4.7373 | opp_overlap 1631178 TTAGGTGATGAAAAA GTGG ATT CCAC TAATGTGACATTCCA TERM 1815 1631227 - 1631214 - g 71 -6.7 -4.2828 | opp_overlap 1631213 1631218 TTCCATGCAGTAAAA TCTCC GACT GGAGA ATATTCGCTGCAGTC myfC 1631151 - 1633487 + | outer membrane usher protein TERM 1816 1633509 - 1633533 + T 100 -13.6 -4.65182 | opp_overlap 1633509 TCAGTATTATCATAA TGCCCGTCAG ATTAA CTGGCGGGCA TTTGTTTGCTTTCTG TERM 1817 1633533 - 1633509 - T 89 -11.4 -3.45023 | opp_overlap 1633509 TCAGTATTATCATAA TGCCCGTCAG ATTAA CTGGCGGGCA TTTGTTTGCTTTCTG nfo 1634400 - 1633555 - | endonuclease IV TERM 1818 1634497 - 1634480 - R 100 -10.5 -4.86731 | opp_overlap 1634480 TGCGGGGAAAGAAAA GGGCCGC AGTG GCGACCC TTAAGTAATAATTAG YE1456 1635544 - 1634531 - | hypothetical protein YE1457 1636174 - 1637046 + | putative DNA-binding transcriptional regulator TERM 1819 1637235 - 1637264 + F 70 -2.8 -5.03314 | overlap 1637238 ATTGTTACTATCCGA GACGGTGGGATT TGTTAC AATCCCGCCTTA TTTTTTAAGGGTGAA TERM 1820 1637238 - 1637261 + F 100 -8.9 -4.62085 | overlap 1637235 GTTACTATCCGAGAC GGTGGGATT TGTTAC AATCCCGCC TTATTTTTTAAGGGT TERM 1821 1637531 - 1637541 + G 71 -8.2 -3.69437 | TTGGCGGCATTTATG CCGG TAT CCGG TTCATTTTCGACTTA TERM 1822 1637887 - 1637899 + G 71 -9.1 -3.53761 | opp_overlap 1637886 1637878 1637887 GCACAACTGGACAAT CGGTG ATG CACCG TTTGCCGGAGGGTTC cadR 1637291 - 1638817 + | lysine transporter TERM 1823 1638812 - 1638798 - f 90 -5.7 -5.57054 | AAGAAGCTAAAAAAA CAGCA CTGAT TGCTG ACTAACAAAATGATG TERM 1824 1638840 - 1638859 + F 100 -12.2 -5.4505 | opp_overlap 1638833 1638840 ATGTAGAACATGCAA GGGCGATA ATTG TATCGCCC TTTTTTGTTGCCCCA TERM 1825 1638859 - 1638840 - f 86 -12.2 -3.21993 | opp_overlap 1638840, overlap 1638833 ATGTAGAACATGCAA GGGCGATA ATTG TATCGCCC TTTTTTGTTGCCCCA TERM 1826 1639031 - 1639045 + F 73 -3.6 -4.96427 | overlap 1639019 1639032 CTATAGCAATCTTAT TGATAA TTA TTATCG TTTGTTTTATTGTTA YE1459 1639092 - 1640174 + | iron ABC transporter TERM 1827 1640780 - 1640792 + G 78 -7.7 -4.4261 | opp_overlap 1640771 1640769 AATATAGCCTTGCGT CATGG CGA CCATG TTTTGATGTTACAAA YE1460 1640171 - 1640959 + | putative siderophore ABC transporter,ATP-binding subunit YE1461 1641282 - 1643156 + | putative outer membrane receptor TERM 1828 1643440 - 1643414 - T 74 -7.9 -3.9749 | gap 1, overlap 1643415 AGGCAGAAGAGTAAA GCGTCCGCGCCA GGGA CGGCGCGG-CTC GAGCCCCCAGGGAAG YE1463 1644171 - 1643551 - | putative glutathione S-transferase-family protein TERM 1829 1643892 - 1643907 + g 71 -10.4 -2.78679 | overlap 1643891 1643894 AATCCATCCATTTTT CAGCGG CCGC CCGCTG CTTTGCCTCAGGCAG YE1464 1644849 - 1644190 - | putative hydrolase YE1465 1645367 - 1646377 + | putative iron/ascorbate oxidoreductase family protein YE1466 1646430 - 1647254 + | hypothetical protein TERM 1830 1647416 - 1647432 + G 74 -10.8 -3.06492 | opp_overlap 1647410 TTGAATTTACTGGAA CGGCCC ACTTC GGGCCG TATTCAAGTGGATGG YE1467 1647251 - 1648237 + | putative ABC transport ATP-binding subunit TERM 1831 1648305 - 1648320 + G 77 -6.8 -4.62302 | overlap 1648304 TGAAACTATCTATAT GGTGGT GATC GCCACC TTTTTCACGATATTG YE1468 1648234 - 1648905 + | putative ABC transport integral membrane subunit TERM 1832 1648978 - 1649002 + T 100 -13.7 -4.42721 | TATTCTGCATAGTTA GGTAGGAATGG CCT CTATTCCTACC TTTCTTGTCTGATTA metB 1650167 - 1649022 - | putative cystathionine gamma-synthase TERM 1833 1649516 - 1649502 - G 71 -4.2 -4.68593 | TGCATTATGTAAAAA GCCTAA TTG TTCGGC CAATTCAGGGTTATT TERM 1834 1649833 - 1649846 + g 70 -8.1 -3.85698 | opp_overlap 1649827 1649828 1649830 ACTCGTAAACCAGCA GTGCG GCTG CGCAC TTTCTCCAGCAGACG uptG 1651560 - 1650193 - | cystathionine beta-lyase TERM 1835 1651609 - 1651579 - H 77 -6.3 -4.7373 | gap 1, overlap 1651580 1651583 TGACTCCAGTAAAAA TTGAGTTAACCGAA TGAG TTCGGTTAAC-CAT CTACGGCTGGATAAT TERM 1836 1651608 - 1651580 - H 78 -9.8 -3.43756 | gap 1, overlap 1651579 1651583 GACTCCAGTAAAAAT TGAGTTAACCGAA TGAG TTCGGTTAAC-CA TCTACGGCTGGATAA TERM 1837 1651606 - 1651583 - H 89 -12.6 -2.86601 | overlap 1651580 1651579 TCCAGTAAAAATTGA GTTAACCGAA TGAG TTCGGTTAAC CATCTACGGCTGGAT dacC 1651953 - 1653170 + | D-alanyl-D-alanine carboxypeptidase TERM 1838 1653202 - 1653183 - T 82 -7.8 -4.49337 | opp_overlap 1653184, overlap 1653184 1653196 TAATATCAAGCAAAA GGGCGACT AGCA AGTCGCCT TTCAGACGGCTAACA TERM 1839 1653201 - 1653184 - T 86 -11.3 -3.28518 | opp_overlap 1653184, overlap 1653183 1653196 AATATCAAGCAAAAG GGCGACT AGCA AGTCGCC TTTCAGACGGCTAAC TERM 1840 1653184 - 1653201 + T 89 -11.3 -3.53811 | opp_overlap 1653183 1653184 1653196 AATATCAAGCAAAAG GGCGACT AGCA AGTCGCC TTTCAGACGGCTAAC TERM 1841 1653359 - 1653386 + T 77 -6.2 -4.58424 | overlap 1653363 GGGTTGTCATTAACT TCAAGGGCGGCT CTCA AGTCGCCCTTAC TTTTCTATCCTGATA TERM 1842 1653363 - 1653382 + T 95 -11.4 -3.79764 | overlap 1653359 TGTCATTAACTTCAA GGGCGGCT CTCA AGTCGCCC TTACTTTTCTATCCT sdaB 1654773 - 1653406 - | L-serine dehydratase 2 TERM 1843 1654859 - 1654836 - R 100 -10.2 -4.56775 | opp_overlap 1654838, overlap 1654838 ATGCCGTGGGAAAAA GAGCCGGCGC GGAC GCACCGGCTT TTGAAACGATTCTCA TERM 1844 1654838 - 1654857 + r 91 -10.6 -4.10007 | opp_overlap 1654836 1654838 GCCGTGGGAAAAAGA GCCGGCGC GGAC GCACCGGC TTTTGAAACGATTCT TERM 1845 1654857 - 1654838 - R 100 -12.8 -3.90048 | opp_overlap 1654838, overlap 1654836 GCCGTGGGAAAAAGA GCCGGCGC GGAC GCACCGGC TTTTGAAACGATTCT b2796 1656214 - 1654919 - | serine transporter TERM 1846 1656641 - 1656651 + r 76 -2.6 -5.31456 | opp_overlap 1656641 TTACTGAACAATAAA TAAA CGA TTTA TTTTTTATCCCTTAA TERM 1847 1656882 - 1656866 - R 73 -3.7 -5.011 | AGTGAAATAAGAAAA CAACAAT AAG AGTGTTG ATGGGCAGGAATAAG deoR 1658238 - 1657474 - | DNA-binding transcriptional repressor DeoR TERM 1848 1658351 - 1658325 - R 78 -9.5 -3.71487 | gap 1, opp_overlap 1658329, overlap 1658329 1658341 1658342 CAGTACATGGAATAA GTAA-GCCCGGC AATA ACCGGGCTTTAC CCGTCATACTTCAAG TERM 1849 1658346 - 1658329 - R 80 -10.5 -3.55304 | opp_overlap 1658329, overlap 1658325 1658341 1658342 ACATGGAATAAGTAA GCCCGGC AATA ACCGGGC TTTACCCGTCATACT TERM 1850 1658329 - 1658346 + r 80 -9.8 -3.58522 | opp_overlap 1658329 1658325 1658341 1658342 ACATGGAATAAGTAA GCCCGG CAATAA CCGGGC TTTACCCGTCATACT deoC 1659227 - 1658556 - | deoxyribose-phosphate aldolase YE1476 1660098 - 1659502 - | undecaprenyl pyrophosphate phosphatase YE1477 1660877 - 1660107 - | hypothetical protein TERM 1851 1660330 - 1660320 - G 80 -2.6 -5.4593 | GTAAAACAAGAAAAA TAAT GCC ATTA CTGCAAACCCACTAG YE1478 1662839 - 1661151 - | hypothetical protein TERM 1852 1661897 - 1661907 + g 71 -4.6 -4.57341 | TCAGGCGCTTACCGA CGGC ATT GCTG TTTTTGACCACAATT TERM 1853 1662334 - 1662317 - G 73 -7.7 -4.07687 | AGCGCGCCCCTAAAA TCAGGCT AACC AGCCCGA TAAGATAGGTCAGGG TERM 1854 1662659 - 1662645 - G 71 -7 -4.12941 | opp_overlap 1662645 AATAAACAGCATAAA GCCCAG ATT CAGGGC TTCGGTATTAATCGT TERM 1855 1663180 - 1663153 - R 74 -10 -3.17725 | gap 1, opp_overlap 1663160, overlap 1663160 CTAAATGACAGGCAA GAAAAAAGGGCGC TAA GCACCC-TTTTTC GGATAAAACTCATCA TERM 1856 1663174 - 1663160 - R 100 -9.2 -5.49234 | opp_overlap 1663160, overlap 1663153 ACAGGCAAGAAAAAA GGGCGC TAA GCACCC TTTTTCGGATAAAAC TERM 1857 1663160 - 1663174 + r 79 -7 -4.62069 | opp_overlap 1663160 1663153 ACAGGCAAGAAAAAA GGGCGC TAA GCACCC TTTTTCGGATAAAAC grxA 1663512 - 1663249 - | glutaredoxin 1 TERM 1858 1663348 - 1663361 + g 74 -3.1 -5.03314 | overlap 1663338 1663349 TGGCACGGTTTCTAC TGGTT TGCC AACCG TTTTTTCCAGATCAG TERM 1859 1663494 - 1663478 - G 75 -10.1 -3.32993 | GCACGTACACAGTAA GGGCATC CAG GACGCCC AAAAATCACAGCAAA YE1481 1663827 - 1664135 + | hypothetical protein YE1483 1664254 - 1664739 + | hypothetical protein TERM 1860 1665122 - 1665141 + F 71 -9.4 -2.91395 | overlap 1665121 CGCAGGACAACCGTG TTGTATCC CACT GGATACAA ATTTATCGCACGAAT potF 1665185 - 1666294 + | putrescine ABC transporter periplasmic substrate-binding protein TERM 1861 1666372 - 1666401 + F 100 -11.5 -5.4505 | overlap 1666374 TAAAATAGATCATGG TAGGAACAGGGGG TTAT CTTCCTGTTCCTG TTTTTTATTGCGCCG TERM 1862 1666374 - 1666399 + F 100 -11.9 -4.36592 | overlap 1666372 AAATAGATCATGGTA GGAACAGGGGG TTAT CTTCCTGTTCC TGTTTTTTATTGCGC TERM 1863 1667023 - 1667010 - g 76 -2.3 -5.24129 | overlap 1667011 GCGTTGGATAAAAAA CTGCG CGAC CGCAT GCAACTCGAAGTGGT potG 1666461 - 1667594 + | putrescine transporter ATP-binding subunit potH 1667631 - 1668596 + | putrescine ABC transporter membrane protein TERM 1864 1668807 - 1668833 + G 78 -11.4 -3.02144 | TGAGTCTCACTATTG CCGCCGCCTCGG CCA CCATGGCGGTGG TGTTGGGGACGATAG TERM 1865 1669427 - 1669400 - g 71 -4.9 -4.56597 | gap 1 TCCCGTTCGGAAAAA CAGCGGTTGCGT GAATT ACGCAAA-GCTG CCCGTGGTTAATTGA potI 1668593 - 1669438 + | putrescine ABC transporter membrane protein TERM 1866 1669532 - 1669509 - f 100 -15.4 -2.56596 | opp_overlap 1669509 1669512, overlap 1669512 TCTTTCATTAACTTA TAACGCCGCT TCCG AGCGGCGTTA TTGTCTGGGATAACA TERM 1867 1669509 - 1669532 + F 100 -15.4 -3.50393 | opp_overlap 1669509 1669512, overlap 1669512 TCTTTCATTAACTTA TAACGCCGCT TCCG AGCGGCGTTA TTGTCTGGGATAACA TERM 1868 1669512 - 1669529 + F 100 -12.7 -3.88946 | opp_overlap 1669512 1669509, overlap 1669509 TTCATTAACTTATAA CGCCGCT TCCG AGCGGCG TTATTGTCTGGGATA TERM 1869 1669529 - 1669512 - f 100 -12.7 -3.43676 | opp_overlap 1669509 1669512, overlap 1669509 TTCATTAACTTATAA CGCCGCT TCCG AGCGGCG TTATTGTCTGGGATA rumB 1670155 - 1671282 + | 23S rRNA methyluridine methyltransferase artJ 1672157 - 1671408 - | arginine-binding periplasmic protein 2 precursor TERM 1870 1672431 - 1672410 - R 84 -10.9 -3.60792 | opp_overlap 1672409 GCCTCAACCGCCAAA GGGGTTACA AGCG CGTAACCCC CTTGGATCCCCTGCG TERM 1871 1672510 - 1672539 + r 93 -14.3 -2.53263 | overlap 1672502 TTTCGCTGACGGGAC GGCTTTACGCGGA TCCC TCCGCGTGACGCC TAAATTCGCCGTCCA TERM 1872 1672544 - 1672561 + r 72 -7.7 -3.81428 | opp_overlap 1672544 CGCGTGACGCCTAAA TTCGCCG TCCA TGGCGAA TTTCCCTTGCTTCAT TERM 1873 1672845 - 1672826 - R 86 -11.4 -3.32844 | opp_overlap 1672826 TGCGGGATTGCATAA GGGGCCAC GCTT ATGGCCCC TTTGCCGGTTGGTTC TERM 1874 1672826 - 1672845 + r 84 -10.7 -3.62478 | opp_overlap 1672826 TGCGGGATTGCATAA GGGGCCA CGCTTA TGGCCCC TTTGCCGGTTGGTTC artM 1673644 - 1672976 - | arginine transporter permease subunit ArtM artQ 1674360 - 1673644 - | arginine transporter permease subunit ArtQ TERM 1875 1674341 - 1674306 - G 82 -10.4 -3.89346 | gap 1, opp_overlap 1674312, overlap 1674307 GGGCCAGTGCACAAA CGGCAAG-GCCGACGGT CAT ACCGGCGGCGCTTGCTA AAGGTTGAAATTCAT TERM 1876 1674340 - 1674307 - G 78 -11.7 -2.93393 | gap 1, opp_overlap 1674312, overlap 1674306 GGCCAGTGCACAAAC GGCAAG-GCCGACGGT CAT ACCGGCGGCGCTTGCT AAAGGTTGAAATTCA artI 1675103 - 1674372 - | arginine-binding periplasmic protein 1 precursor artP 1675852 - 1675124 - | arginine transporter ATP-binding subunit YE1502 1677270 - 1676695 - | putative lipoprotein YE1503 1678349 - 1677339 - | hypothetical protein TERM 1877 1678559 - 1678538 - R 95 -13.1 -3.15544 | overlap 1678523 GCTCATCGGGATTAA TGAGCCTCA TCCT TGAGGCTCA CCCTACGGGCTAGCA YE1504 1680135 - 1678678 - | hypothetical protein ltaA 1681151 - 1680132 - | L-threonine aldolase YE1506 1682177 - 1681290 - | hypothetical protein TERM 1878 1681617 - 1681604 - G 73 -2.3 -5.02074 | CGATGGCTGAAAAAA TACGG TTCA CCGTG CTGGGAGGAAGATAC TERM 1879 1681809 - 1681828 + g 85 -10.8 -3.89302 | TTGAGATACCGGGTG GTCGAGTT CGAA AACTCGAC TTTGCTGTAGTTGAT poxB 1684131 - 1682410 - | pyruvate dehydrogenase hcr 1685421 - 1684399 - | HCP oxidoreductase, NADH-dependent hcp 1687167 - 1685515 - | hydroxylamine reductase TERM 1880 1687355 - 1687324 - R 90 -11.6 -3.6608 | overlap 1687327 ACTATTGGAGTGAAA TTACGCAGTGAACC AAGT GGCTCACTGCGCGA ATGAAGAATTATGAA TERM 1881 1687352 - 1687327 - R 100 -15.5 -2.94322 | overlap 1687324 ATTGGAGTGAAATTA CGCAGTGAACC AAGT GGCTCACTGCG CGAATGAAGAATTAT YE1511 1688263 - 1687364 - | hypothetical protein YE1512 1688517 - 1690181 + | hypothetical protein YE1513 1691161 - 1690178 - | putative virulence factor TERM 1882 1691875 - 1691861 - g 74 -4.3 -4.84642 | opp_overlap 1691872, overlap 1691868 CGCAAATTAATAAAA CCAAA GCCAG TTTGG ATACTGCCAATATTA YE1514 1691350 - 1692465 + | macrolide transporter subunit MacA TERM 1883 1692706 - 1692730 + G 77 -4.1 -5.07652 | opp_overlap 1692695 ACAACGACGCATTGG CCGCATTGCGC CGC GAGCATTTCGG TTTTATTTTCCAGCG YE1515 1692465 - 1694414 + | macrolide transporter ATP-binding /permease protein TERM 1884 1694502 - 1694469 - T 72 -7.5 -3.98661 | opp_overlap 1694475 1694476, overlap 1694475 1694476 TAGATGTATTAGAAA TAAAAACGCCAGTCA TTAT TGGCTGGCATTTTGA ATTGTCATAATAAAT TERM 1885 1694496 - 1694475 - T 89 -6.5 -5.40464 | opp_overlap 1694475 1694476, overlap 1694469 1694476 TATTAGAAATAAAAA CGCCAGTCA TTAT TGGCTGGCA TTTTGAATTGTCATA TERM 1886 1694475 - 1694496 + T 72 -6.5 -4.33151 | opp_overlap 1694475 1694469 1694476, overlap 1694476 TATTAGAAATAAAAA CGCCAGTCA TTAT TGGCTGGCA TTTTGAATTGTCATA TERM 1887 1694495 - 1694476 - T 72 -7.8 -3.82652 | opp_overlap 1694475 1694476, overlap 1694475 1694469 ATTAGAAATAAAAAC GCCAGTCA TTAT TGGCTGGC ATTTTGAATTGTCAT TERM 1888 1694476 - 1694495 + T 74 -10 -3.19168 | opp_overlap 1694476 1694475 1694469, overlap 1694475 ATTAGAAATAAAAAC GCCAGTCA TTAT TGGCTGGC ATTTTGAATTGTCAT cspD 1694870 - 1694613 - | cold shock-like protein TERM 1889 1695297 - 1695285 - g 71 -4.1 -4.73432 | opp_overlap 1695287 1695288, overlap 1695289 TCAAAGATAAACAAA TCGAG GCG CTCAA ACCGCCATCTATGTA clpS 1695230 - 1695550 + | ATP-dependent Clp protease adaptor protein ClpS TERM 1890 1695557 - 1695545 - f 71 -4.8 -4.58395 | TGTACGCTGGAAAAA GCCT GATTA AGGC AATTATTGGGAGGTG TERM 1891 1695795 - 1695769 - g 71 -6.5 -4.20516 | overlap 1695772 CGTTTATTGAACAAA CCACACCGACC TTACC GGTCAGTGAAG AAGAGCGTGATACCC TERM 1892 1696213 - 1696199 - g 76 -7.1 -4.40561 | TCGGCGTAAAAATAA CCCAC TGTTG GTGGG GGAATCTGGCGTCGG TERM 1893 1696245 - 1696234 - g 71 -7.2 -4.07568 | CTGGCGTCGGTAAAA CGGC TATC GCCG AAGGTTTAGCCTGGC TERM 1894 1696590 - 1696572 - g 73 -5.3 -4.59511 | gap 1, opp_overlap 1696560 1696575, overlap 1696561 1696575 AATATTTTTGAAAAA GATCGTGC ACTG GCACG-TC GTTTCCAGAAAATTG clpA 1695576 - 1697852 + | ATP-dependent Clp protease ATP-binding subunit TERM 1895 1697931 - 1697904 - T 100 -13.6 -4.59982 | gap 1, opp_overlap 1697904 TGAGAACGAAATAAA GGGCGATAAGCTA ATT TAGCT-ATCGCCC TTTTTATTTCTTTGC TERM 1896 1697904 - 1697931 + T 100 -13.6 -5.5454 | gap 1, opp_overlap 1697904 TGAGAACGAAATAAA GGGCGATAAGCTA ATT TAGCT-ATCGCCC TTTTTATTTCTTTGC TERM 1897 1698037 - 1698012 - T 76 -6.7 -4.49716 | AAAGAAAACGCAAAA CGCCCTAACCA TAAA CGGGAAGGGCG CCGGAGGGGGACTAC infA 1698315 - 1698097 - | translation initiation factor IF-1 aat 1699191 - 1698481 - | leucyl/phenylalanyl-tRNA--protein transferase TERM 1898 1698604 - 1698577 - G 90 -2.6 -5.75342 | overlap 1698579 CTGTTGCAAAAAAAA GTTGCGTGGGAT CTCA ATCGCACCCAGC GACGCAGTGTGAGCG TERM 1899 1699088 - 1699056 - G 75 -5.5 -4.7078 | opp_overlap 1699046, overlap 1699048 1699045 1699057 1699058 1699082 1699085 TGAACCAGGGAAAAA TCCCCCGTTCATAGG CGG CCAATAAACGAGGAG GAGATAGATCTCCCC TERM 1900 1699104 - 1699085 - G 70 -10 -3.10244 | overlap 1699058 1699057 1699056 1699082 GCGGCCAATAAACGA GGAGGAGA TAGA TCTCCCCC AAGGGCCAGCAATCC cydC 1701273 - 1699549 - | cysteine/glutathione ABC transporter membrane/ATP-binding component cydD 1703042 - 1701276 - | cysteine/glutathione ABC transporter membrane/ATP-binding component TERM 1901 1702982 - 1702993 + g 88 -7.2 -5.04249 | GGCGGAGCCAACGTT GCGC CGGG GCGC TTTGTTTTTTCAGCC TERM 1902 1703114 - 1703086 - R 85 -4 -5.51165 | gap 1 AAAATTTCAAAAAAA TGGT-TATCACCT TTCG AGATGACAAACCA GCGAGGGGCAATATT TERM 1903 1703285 - 1703256 - R 100 -16.5 -5.08367 | opp_overlap 1703256 AATAGAAATTAAAAA CGGGCAGCTCACA TATT TGTTAGCTGCCCG TTGGTATTGGTTGAA TERM 1904 1703256 - 1703285 + r 100 -16.5 -3.42147 | opp_overlap 1703256 AATAGAAATTAAAAA CGGGCAGCTCACA TATT TGTTAGCTGCCCG TTGGTATTGGTTGAA trxB 1704291 - 1703317 - | thioredoxin reductase TERM 1905 1704154 - 1704171 + g 100 -9.1 -4.74504 | TTCGACATCGGTGGT GGTGGTC AATT GACCGCC TTTTTCCATTCCGGT alsB 1705062 - 1705556 + | leucine-responsive transcriptional regulator TERM 1906 1705614 - 1705639 + F 100 -13.3 -3.7614 | overlap 1705617 TTATTCATACAGTTT CAGCGCCGGGA AGGT TCTCGGCGTTG TTATTCATACTAGTT TERM 1907 1705617 - 1705636 + F 100 -11.4 -4.00445 | overlap 1705614 TTCATACAGTTTCAG CGCCGGGA AGGT TCTCGGCG TTGTTATTCATACTA ftsK 1705678 - 1709298 + | putative cell division protein TERM 1908 1709469 - 1709453 - f 100 -15.1 -2.99471 | TGACGGGTATAGACA GGGCCGC TTT GCGGCCC TTGAGGTTAATGACA TERM 1909 1709615 - 1709631 + F 100 -15.1 -3.28712 | overlap 1709610 1709605 TGTCAGCAGTCTGCA GGGCCGC TTT GCGGCCC TTATGCAAAGAAGCG TERM 1910 1710011 - 1710001 - g 77 -6.8 -4.57073 | GACCTGGCTGAAAAA TGCC ACA GGCA ATACACCATTTATGC lolA 1709690 - 1710301 + | outer-membrane lipoprotein carrier protein TERM 1911 1710356 - 1710373 + G 79 -10.5 -3.66178 | TGAGTTTCAGCCATT GGCCGCG CGTA TGCGGCC TTTGACGTTGGAGCA TERM 1912 1710621 - 1710611 - g 76 -8.2 -4.07687 | overlap 1710612 ACGTGCCCGCCAAAA CCGC GAC GCGG GGCGGCGAACAATTT TERM 1913 1711033 - 1711049 + G 74 -9.3 -3.78953 | TGAAAGAAGTGTCAG GCGAGCG TAG CGCGCGC TTTGATAATAAAGGT YE1527 1710309 - 1711652 + | recombination factor protein RarA TERM 1914 1711646 - 1711678 + F 81 -11.3 -2.88861 | opp_overlap 1711642 1711641 1711643, overlap 1711642 CCCGATAAAACGCTA CCGCTAGCCTTGCTG TTG CGGTAAGGTTAGCGC TATATAGAACTGCTA serS 1711824 - 1713116 + | seryl-tRNA synthetase TERM 1915 1713173 - 1713160 - T 83 -9.5 -3.95153 | opp_overlap 1713154 TCAAGTAGTTATAAA GCGCC TACG GGCGC TTGAGGTTAATGACA TERM 1916 1713512 - 1713561 + T 100 -17.5 -3.13299 | gap 1, overlap 1713517 TATTCACTTTTTTTC TTGAGCCTTGTCCGT-GTTTGAGA TTA TCTCAAACCGCGGATAAGGTTCGA TATTCCGTATGATGA TERM 1917 1713517 - 1713556 + T 100 -16 -3.19789 | gap 1, overlap 1713512 ACTTTTTTTCTTGAG CCTTGTCCGT-GTTTGAGA TTA TCTCAAACCGCGGATAAGG TTCGATATTCCGTAT YE1529 1714559 - 1713540 - | putative transposase for IS1667 TERM 1918 1713915 - 1713940 + g 80 -7.5 -4.57569 | opp_overlap 1713907 1713920, overlap 1713920 CACACCAGGGACTTT CAAGACCCGCT GGCA GGCGGGTTGTG TTTTTGCCCAACTGC TERM 1919 1713920 - 1713935 + g 76 -8.2 -4.07746 | opp_overlap 1713907 1713920, overlap 1713915 CAGGGACTTTCAAGA CCCGCT GGCA GGCGGG TTGTGTTTTTGCCCA TERM 1920 1714720 - 1714733 + H 100 -9.5 -5.75538 | opp_overlap 1714720 GTCAACAGTCTGAAA GCGCC TACG GGCGC TTTTTCTTTTTTGGG TERM 1921 1714733 - 1714720 - H 78 -9.5 -3.6106 | opp_overlap 1714720 GTCAACAGTCTGAAA GCGCC TACG GGCGC TTTTTCTTTTTTGGG TERM 1922 1714922 - 1714932 + G 71 -4.6 -4.49756 | CCCGGTGCTGCTTTT GCTC TGT GGGC TTTTGCTGTTTACGA TERM 1923 1715666 - 1715680 + G 75 -7.8 -4.2704 | AATAGGCAAAATGGC CGACCG CTA TGGTCG TTTGTTGGTACTGCG YE1530 1714890 - 1716038 + | MFS family transporter TERM 1924 1716082 - 1716051 - T 100 -9.5 -5.43866 | gap 1, opp_overlap 1716051 TAACCGCCAAAAAAA TACCGCCA-GCGAG GAAAT CTTGCATGGCGGTA TTGATTGAAAATCAG TERM 1925 1716051 - 1716082 + T 95 -12.4 -3.34895 | gap 1, opp_overlap 1716051 TAACCGCCAAAAAAA TACCGCCA-GCGAGG AAA TCTTGCATGGCGGTA TTGATTGAAAATCAG pflA 1716763 - 1716116 - | pyruvate formate lyase-activating enzyme 1 TERM 1926 1716906 - 1716887 - R 100 -11.4 -4.56367 | opp_overlap 1716887 TACTGGATAAATAAA GGCCCCAC GAAG GTGGAGCC TTTTAGTCTAATCTA TERM 1927 1716887 - 1716906 + r 88 -9.2 -4.38171 | opp_overlap 1716887 TACTGGATAAATAAA GGCCCCAC GAAG GTGGAGCC TTTTAGTCTAATCTA pfl 1719217 - 1716935 - | formate acetyltransferase 1 TERM 1928 1717966 - 1717982 + g 71 -8.7 -3.65046 | opp_overlap 1717962 1717959 GGCTAACACAACATG CGATGGC ATA GTCATCG TTGTTGAAGTCAGGA TERM 1929 1718795 - 1718809 + g 74 -2.8 -5.15969 | GTTATGTGTTTTACG GTATTC GGT GAAGAC TTTTTTCAGTTGCGG TERM 1930 1718914 - 1718939 + g 74 -9.1 -3.7456 | overlap 1718913 TCAATGGTTTTTCAG TCTGCAAACCA ACGA TGGTTTCCAGA TCTTTATTAATGTAG TERM 1931 1719131 - 1719151 + g 73 -5.5 -4.59773 | GTAGTTTTTCTGGAT GAAGTCA CGAACGT TGACTTC TTTTTGCCAGTCACC focA 1720127 - 1719270 - | formate transporter TERM 1932 1720758 - 1720782 + r 84 -10.7 -3.73072 | GGTTTTGTCAGCAGT CTGAAGCGGCG CAA TGCCGCTTGAG TTTAATGACAAAGTT TERM 1933 1720977 - 1720965 - R 82 -10.5 -3.61398 | CTTTTTGCCCAATAA CGGCG TTT CGCCG CCTGCAATTTAGCGT YE1534 1722709 - 1720943 - | hypothetical protein ansB 1722858 - 1723895 + | L-asparaginase II TERM 1934 1723910 - 1723931 + F 78 -10.1 -3.41738 | overlap 1723910 1723912 ATAGATCCAATCTTT GACGGAGGC TTCG GCCTCCGTA TCTATTTATTACCGG TERM 1935 1723912 - 1723929 + F 95 -12.7 -3.27382 | overlap 1723910 1723910 AGATCCAATCTTTGA CGGAGGC TTCG GCCTCCG TATCTATTTATTACC TERM 1936 1724509 - 1724523 + G 80 -4.2 -5.27335 | ATTCTGGAGGTCAAT GGCGCT ATC AGTGTC TTTTTCTTTAGCAAA YE1536 1724041 - 1724733 + | putative inner membrane protein TERM 1937 1725128 - 1725105 - g 74 -3.9 -4.91459 | overlap 1725107 GAAGAGGCAGAAAAA GATCTGC GCGATCTGAT GCAGATC CCGGCCAATTATAAA serC 1724940 - 1726025 + | phosphoserine aminotransferase TERM 1938 1727398 - 1727381 - g 74 -9.1 -3.63991 | GACTACTTTGAACAA CTGGCCC GATT GAGCCAG ATAGCCTAATCATCA aroA 1726121 - 1727407 + | 3-phosphoshikimate 1-carboxyvinyltransferase TERM 1939 1727422 - 1727441 + F 100 -12.2 -4.36206 | ATCATCAGCTTCAGA TGGGTGTC GTTC GACACCCA TTTCTTATCGGTTAT cmk 1727647 - 1728339 + | cytidylate kinase rpsA 1728508 - 1730181 + | 30S ribosomal protein S1 TERM 1940 1730211 - 1730188 - f 72 -7.3 -3.99374 | overlap 1730189 GGCGAGTAATAATAA CGGGGGCGG TTTTCC CCGCCCCTA TACGGTAGTTTAGCT ihfB 1730245 - 1730529 + | integration host factor subunit beta TERM 1941 1730574 - 1730593 + F 100 -11.4 -5.46706 | opp_overlap 1730574 AAAGCTGATACGAAA CGGTGCCT CTAA GGGCACCG TTTTTATTTTGGCAT TERM 1942 1730593 - 1730574 - f 88 -10.7 -3.85114 | opp_overlap 1730574 AAAGCTGATACGAAA CGGTGCC TCTAAG GGCACCG TTTTTATTTTGGCAT YE1542 1730866 - 1733151 + | hypothetical protein msbA 1733187 - 1734935 + | lipid transporter ATP-binding/permease protein lpxK 1734932 - 1735918 + | tetraacyldisaccharide 4'-kinase YE1545 1737274 - 1735925 - | hypothetical protein TERM 1943 1737250 - 1737234 - G 71 -6.5 -4.21319 | ACTAATTGTAATAAA GCCCCGT ATA ACGGAAC TTCAACCTGATACAT cspE2 1737791 - 1738000 + | putative cold shock protein CspE2 TERM 1944 1738084 - 1738099 + F 100 -8.2 -5.59357 | opp_overlap 1738083 1738084 AGCAAAATTCTAAAG CCCGCG TTTA TGCGGG TTTTTTTCATATAAT TERM 1945 1738353 - 1738343 - g 78 -5.4 -4.95618 | AACACCAAAAACAAA TCAC TGA GTGA AGGGCAGGACGTTGA cspB 1738217 - 1738426 + | cold shock-like protein cspE3 TERM 1946 1738477 - 1738458 - f 82 -7.8 -4.41348 | overlap 1738444 TCGCTTCTAAAGAAA CGGTTACC CAAG GGTAGCCG TGAGGTTATTGACAA TERM 1947 1738555 - 1738581 + F 73 -10.1 -2.97771 | gap 1, overlap 1738550 1738554 TCATCCCTGATGGCT CGACCCGCGCCA TCCT TGGCGCGGA-CG CTTTACTCTTCTACC TERM 1948 1738643 - 1738670 + F 100 -8.4 -5.08169 | opp_overlap 1738647, overlap 1738647 GTTTGCCAGCAGTCT GAAACGGCTACC CAAG GGTAGCCGTTAG TTTTTTGGCCTCTGT TERM 1949 1738647 - 1738666 + F 100 -13.6 -3.93769 | opp_overlap 1738647, overlap 1738643 GCCAGCAGTCTGAAA CGGCTACC CAAG GGTAGCCG TTAGTTTTTTGGCCT TERM 1950 1738666 - 1738647 - f 100 -13.6 -3.58343 | opp_overlap 1738647 1738643 GCCAGCAGTCTGAAA CGGCTACC CAAG GGTAGCCG TTAGTTTTTTGGCCT TERM 1951 1738682 - 1738692 + F 84 -5.4 -5.36441 | TTAGTTTTTTGGCCT CTGT TCG ACAG TTTTTTCTGTCGCCG YE1549 1739047 - 1739229 + | hypothetical protein kdsB 1739226 - 1739978 + | 3-deoxy-manno-octulosonate cytidylyltransferase TERM 1952 1739997 - 1740019 + F 86 -9.8 -3.99775 | TTGTTCAGATTTCTA CGCCAGGCTT ATA GGGTCTGGCG TTATTATTCCTACCT TERM 1953 1740969 - 1740985 + G 71 -4.4 -4.71426 | overlap 1740970 TGGCTCTATACTCTT TGGGAA CTGGT TTCCCG TTTTATTCATACCGG YE1551 1740168 - 1741061 + | hypothetical protein YE1552 1741831 - 1741064 - | hypothetical protein TERM 1954 1741450 - 1741461 + g 71 -4.4 -4.74504 | TCGGCCCCGCACTAC TGGT AAAT ACCA TTTTTGCATTAGGAT TERM 1955 1742303 - 1742289 - g 77 -4.2 -5.06414 | overlap 1742291 GCGGCTGAAGAAAAA GGTGTG AGC CACAAC ATGCAATTTGTACAA smtA 1742022 - 1742807 + | putative metallothionein SmtA TERM 1956 1743700 - 1743685 - g 74 -3.9 -4.89852 | TGATATGGATAAAAA CCGGG TATTCG CCCAG CGCCTGCGCCAATCG kicB 1742804 - 1744126 + | condesin subunit F kicA 1744134 - 1744835 + | condesin subunit E TERM 1957 1745477 - 1745487 + G 71 -6.8 -4.20367 | overlap 1745474 AGCGCGATTACTCGC TCGC TGC GCGA TTATTTATTGCCAGA TERM 1958 1745912 - 1745880 - g 83 -4.2 -5.5112 | gap 1, opp_overlap 1745884, overlap 1745884 GCCAGCAAGAAAAAA TCGAGCGCTACCAAA GTGA TTTGGAAGAGCT-GA CTTACCGGTTGGAAG TERM 1959 1746420 - 1746442 + G 74 -9 -3.62522 | overlap 1746440 TGGAGCAGCGTTTAC GCGCGCAGCA AGA TGCCGAGCGC TTGTTGCAAGAGTTC TERM 1960 1747721 - 1747738 + G 73 -7.7 -3.99678 | gap 1 GCTTTAGTTGAAGTG GTGCAGCG TCG CGC-GCAC TTTGGTTATACCGAT mukB 1744832 - 1749277 + | cell division protein MukB TERM 1961 1749332 - 1749348 + F 100 -13.7 -5.50774 | ATTAATTCTCGTCAA TGGCCGC CTA GCGGCCA TTTTTATTTGTTGTC TERM 1962 1749632 - 1749620 - g 75 -3.3 -5.13354 | opp_overlap 1749627, overlap 1749622 GGTAGAAAAAAGAAA TCCGC AAC GCGCA TTCGCGTTATATTGC YE1557 1749600 - 1751471 + | hypothetical protein YE1558 1751730 - 1752278 + | hypothetical protein TERM 1963 1752591 - 1752580 - g 74 -4.4 -4.83615 | overlap 1752585 1752587 TATGGGCCAGAAAAA GAAG ATAC CTTC TGGCTAGAAGGACTA YE1559 1752337 - 1752984 + | metallo-beta-lactamase superfamily protein TERM 1964 1753043 - 1753058 + F 100 -8.2 -5.53436 | opp_overlap 1753042 1753043 TGGAATAACAAGAAG GGCGCC ATTC GGTGCC TTTTTTATATTATAT TERM 1965 1753214 - 1753227 + F 75 -5.3 -4.89393 | overlap 1753219 AGATATAACTGATAT TGACT CGGC AGTCA TTTTTCTGCCGTTTG YE1560 1753283 - 1754812 + | hypothetical protein TERM 1966 1754856 - 1754840 - T 100 -10.1 -4.85653 | GATAGATAAAACAAA GGATGCC TGG GGCACCC TTCAGACTGCTGACA TERM 1967 1754946 - 1754920 - T 72 -7.2 -3.97088 | gap 1, overlap 1754921 1754936 CGGTAGAAGAGTAAA GCGTCCGCGCC AAGGAG GGCGCGG-CTC GAGCCCCCAGGGAGG TERM 1968 1755026 - 1755043 + T 79 -6.9 -4.62872 | opp_overlap 1755020, overlap 1755027 TGTCATTAACCTCAA TGGTGCC TTGG GGCACCC TTTTTACAGATTAAT TERM 1969 1755027 - 1755042 + T 78 -10.4 -3.37 | opp_overlap 1755020, overlap 1755026 GTCATTAACCTCAAT GGTGCC TTGG GGCACC CTTTTTACAGATTAA aspC 1756262 - 1755072 - | aromatic amino acid aminotransferase TERM 1970 1756118 - 1756135 + g 80 -9.1 -4.17491 | overlap 1756130 GCTCAGCTTTTTTGA CGCTGGT CAGC ACCGGCG TTTTCCCGGTTTCGT TERM 1971 1756472 - 1756499 + r 100 -17.2 -5.14163 | opp_overlap 1756459 GAGCCGAGGCCCTAA TGCCAGTCAGTT AAGC AACTGACTGGCA TTTTTGTTCCTGGCT YE1562 1757812 - 1756478 - | transposase for insertion sequence element IS1660 TERM 1972 1757001 - 1757043 + g 75 -7.7 -4.19238 | gap 1, overlap 1756978 1757002 AGGCGGGCTGTCATT TCAGCCCCCA-GCTCGGG CCACTTTT TCCGGGCCTGTGGGCTGG TTTTCAACTTCACCA TERM 1973 1757844 - 1757820 - R 100 -10.8 -5.61596 | opp_overlap 1757820 ATGTGCATAAAAAAA TCCGGAAACG AAGAA CATTTCCGGA TTCTTACACAACCAC TERM 1974 1757820 - 1757844 + r 73 -8.6 -3.61398 | opp_overlap 1757820 ATGTGCATAAAAAAA TCCGGAAACG AAGAA CATTTCCGGA TTCTTACACAACCAC TERM 1975 1757861 - 1757878 + r 84 -11.3 -3.09635 | opp_overlap 1757859 TCTTACACAACCACT GGATCGG TCAA CCGATCC TTAACTGATCGGCAT ompF 1759096 - 1757957 - | putative outer membrane porin F protein TERM 1976 1759360 - 1759330 - R 100 -9.8 -5.09426 | opp_overlap 1759333 1759338, overlap 1759331 1759333 1759338 TCGAACTTTAAAAAA TGATAAAAGCCAGC AAG GCTGGCTTTTATTT ATACAAAATCACACT TERM 1977 1759359 - 1759331 - R 100 -13.3 -3.64933 | opp_overlap 1759333 1759338, overlap 1759330 1759333 1759338 CGAACTTTAAAAAAT GATAAAAGCCAGC AAG GCTGGCTTTTATT TATACAAAATCACAC TERM 1978 1759357 - 1759333 - R 100 -15.9 -3.39328 | opp_overlap 1759333 1759338, overlap 1759331 1759330 1759338 AACTTTAAAAAATGA TAAAAGCCAGC AAG GCTGGCTTTTA TTTATACAAAATCAC TERM 1979 1759333 - 1759357 + r 100 -15.9 -3.86897 | opp_overlap 1759331 1759330 1759333 1759338, overlap 1759338 AACTTTAAAAAATGA TAAAAGCCAGC AAG GCTGGCTTTTA TTTATACAAAATCAC TERM 1980 1759338 - 1759352 + r 100 -11.4 -4.99043 | opp_overlap 1759333 1759331 1759330 1759338, overlap 1759333 TAAAAAATGATAAAA GCCAGC AAG GCTGGC TTTTATTTATACAAA TERM 1981 1759352 - 1759338 - R 100 -11.4 -4.76171 | opp_overlap 1759338 1759333, overlap 1759333 1759331 1759330 TAAAAAATGATAAAA GCCAGC AAG GCTGGC TTTTATTTATACAAA asnC 1760795 - 1759395 - | asparaginyl-tRNA synthetase pncB 1762257 - 1761052 - | nicotinate phosphoribosyltransferase pepN 1762849 - 1765464 + | putative aminopeptidase N TERM 1982 1765485 - 1765508 + F 91 -7.4 -5.26316 | opp_overlap 1765486 1765491, overlap 1765486 TTGTTTGCATGATAA ACAGAGGGCA GCGA TGCTCTCTGC TTTTTTATCCCCTGA TERM 1983 1765486 - 1765507 + F 88 -10.9 -3.75067 | opp_overlap 1765486 1765491, overlap 1765485 TGTTTGCATGATAAA CAGAGGGCA GCGA TGCTCTCTG CTTTTTTATCCCCTG TERM 1984 1765507 - 1765486 - f 80 -8.7 -3.96148 | opp_overlap 1765486 1765485, overlap 1765491 TGTTTGCATGATAAA CAGAGGGCA GCGA TGCTCTCTG CTTTTTTATCCCCTG TERM 1985 1766249 - 1766236 - g 70 -2.4 -4.94811 | TTAAAAATAAACAAA CTGA ATTACA TCAG CGTCATCATAAGTAT TERM 1986 1766265 - 1766295 + G 70 -9.7 -3.14211 | gap 1, opp_overlap 1766261 1766282, overlap 1766251 1766267 CGTCATCATAAGTAT GTTCCGGTGGCGGT AAAG ATCGCC-CCGGATC TTACTGAAGAAGAAT TERM 1987 1766267 - 1766293 + G 76 -10.9 -3.13403 | gap 1, opp_overlap 1766261 1766282, overlap 1766265 1766251 TCATCATAAGTATGT TCCGGTGGCGGT AAAG ATCGCC-CCGGA TCTTACTGAAGAAGA pyrD 1765632 - 1766642 + | dihydroorotate dehydrogenase 2 YE1569 1766941 - 1767498 + | hypothetical protein YE1570 1768626 - 1767514 - | putative iron-sulfur binding protein TERM 1988 1768868 - 1768894 + G 80 -7.3 -4.64676 | gap 1, overlap 1768867 TCATGTACCAAAGCC TGCTGTGGAGCC GTTT GGCTTCGC-GCA TTTTGTTACCACTCA TERM 1989 1770208 - 1770192 - g 70 -2.3 -4.84529 | GCAGAAAGGCAAAAA CCAAT ACGAGAA ATTGG CGCAGAAAGGCGAGT YE1571 1768726 - 1770846 + | 23S rRNA m(2)G2445 methyltransferase TERM 1990 1770873 - 1770901 + G 77 -8.8 -4.21974 | TTAATTAGCATGTCC GGTGCCTGGCTG TCGTT CAGCGATGCACC TTTATTAGATAATAC uup 1770852 - 1772765 + | ABC transporter ATPase component TERM 1991 1773981 - 1774001 + G 71 -8.3 -3.66615 | overlap 1773995 ATGAAATAGTGGAGT TCGTTGGCC GCT GGTCAATGA TTGATGTTTTTGTTA pqiA 1772984 - 1774201 + | putative paraquat-inducible protein A pqiB 1774215 - 1775840 + | paraquat-inducible protein B YE1575 1775837 - 1776388 + | putative lipoprotein protein TERM 1992 1776421 - 1776461 + T 100 -12.2 -5.58522 | gap 1 TCCAAATCTGTCTAA TCCTCTTTCATCGATAATT ATAA ATTTATCG-TGAAAGAGGA TTTTTATTTTATATC TERM 1993 1776882 - 1776858 - T 100 -14.4 -2.58714 | opp_overlap 1776858 1776861, overlap 1776861 TGTCAGACTAAGGGA TAACCTCCGC TTTAT GCGGAGGTTA TTGGTTACTTTAATC TERM 1994 1776858 - 1776882 + T 100 -14.4 -3.51202 | opp_overlap 1776858 1776861, overlap 1776861 TGTCAGACTAAGGGA TAACCTCCGC TTTAT GCGGAGGTTA TTGGTTACTTTAATC TERM 1995 1776879 - 1776861 - T 89 -11.7 -3.4439 | opp_overlap 1776858 1776861, overlap 1776858 CAGACTAAGGGATAA CCTCCGC TTTAT GCGGAGG TTATTGGTTACTTTA TERM 1996 1776861 - 1776879 + T 95 -11.7 -3.87638 | opp_overlap 1776861 1776858, overlap 1776858 CAGACTAAGGGATAA CCTCCGC TTTAT GCGGAGG TTATTGGTTACTTTA YE1576 1778166 - 1776892 - | 3-oxoacyl-(acyl carrier protein) synthase II YE1577 1778708 - 1778166 - | hypothetical protein TERM 1997 1778818 - 1778808 - R 100 -6.8 -6.07627 | AGTGTTAAAAAAAAA TGCC ATT GGCA TCATAGTAATAGTTC TERM 1998 1778879 - 1778851 - R 77 -10.2 -3.14468 | TGGCATCATAGTTAA TGTGCAGGGGAG TTAAC CGCCCCTGCACG GGAAAACGGGTCTAA fabA 1779416 - 1778898 - | 3-hydroxydecanoyl-(acyl carrier protein) dehydratase YE1579 1781257 - 1779485 - | putative Lon protease TERM 1999 1781522 - 1781510 - g 80 -4.8 -5.0133 | TATTTGGTTAAAAAA CACC GTGAA GGTG AAGCCATTACTCGTC YE1580 1781447 - 1781902 + | hypothetical protein TERM 2000 1781986 - 1781942 - T 73 -8.9 -3.54848 | opp_overlap 1781948, overlap 1781940 AACACGGCAGAAATA GTGAAATTAAGAAAATGTGAT TTG ATTCGATTTTCTTAATTTCAC GATAAAAAAAACCCC TERM 2001 1782012 - 1781998 - T 100 -12.8 -5.9873 | opp_overlap 1781998 TCACGATAAAAAAAA CCCCGC AAT GCGGGG TTTTTTACGGAAGCA TERM 2002 1781998 - 1782012 + T 100 -12.8 -5.00616 | opp_overlap 1781998 TCACGATAAAAAAAA CCCCGC AAT GCGGGG TTTTTTACGGAAGCA con 1783107 - 1782034 - | outer membrane protein A TERM 2003 1782176 - 1782191 + g 83 -9 -4.36914 | GGGTTAGCTTGGCCT TCACCG CGAG CGGTGA TTTTGTCAGCAGGGA sfiA 1783971 - 1783465 - | SOS cell division inhibitor YE1583 1784201 - 1784836 + | hypothetical protein YE1584 1787008 - 1784873 - | hypothetical protein YE1585 1787485 - 1787033 - | hypothetical protein TERM 2004 1787527 - 1787517 - H 100 -8.2 -5.80364 | AGCTGAATAAAAAAA CCGC AAT GCGG ATGAGTGATAACAGG TERM 2005 1788396 - 1788409 + G 74 -6.7 -4.31692 | opp_overlap 1788394 1788395, overlap 1788402 GCGGCGCAATGAAGC TCTGC CTGA GCAGA TTTTACTGCTCGCTT TERM 2006 1789278 - 1789255 - g 71 -6.7 -4.26351 | TATCAACTGAAGAAA CCCCTGAAT AGCTTG AGTCAGGGG AATAAAAAATCGGTT helD 1787680 - 1789734 + | DNA helicase IV TERM 2007 1789761 - 1789793 + T 73 -10 -3.02371 | gap 1, opp_overlap 1789761 1789766, overlap 1789758 1789766 CGTTTTTGTGAGAAA TGAAACCCGGATATG TTAT CAC-TCCGGGTTTCA TCATTATTTCAGGCG TERM 2008 1789793 - 1789761 - T 100 -12.2 -3.85698 | gap 1, opp_overlap 1789761 1789758 1789766, overlap 1789766 CGTTTTTGTGAGAAA TGAAACCCGGATATG TTAT CAC-TCCGGGTTTCA TCATTATTTCAGGCG mgsA 1790255 - 1789797 - | methylglyoxal synthase TERM 2009 1790152 - 1790183 + g 77 -3.8 -5.06451 | gap 1 TGCTGTGACAAAAGG TCTCTGTTTTGCATG ACC CATTCGAG-CAGAGA TTTTTTGCAATGGTC YE1588 1791127 - 1790459 - | hypothetical protein YE1589 1791459 - 1791875 + | hypothetical protein TERM 2010 1792478 - 1792450 - g 75 -3.7 -5.08824 | CGCCTACTTAAAAAA GCTGCGTGCCTTG ATT CAGGAGAAGCAGC GGAAAAAACGCGAAT YE1590 1791980 - 1792495 + | insertion element IS1664 protein TERM 2011 1793326 - 1793281 - g 90 -9.2 -4.59376 | gap 1, overlap 1793286 1793287 AGGATCAAAGTAAAA TTAA-ACGGCCTGAGTCCGGT GCAGT ACCGAAATCAGGCCATGTCAA CCGCCAGGAAAAGTG TERM 2012 1793320 - 1793286 - g 100 -12.9 -4.29472 | overlap 1793281 1793287 CAAAGTAAAATTAAA CGGCCTGAGTCCGGT GCAGT ACCGAAATCAGGCCA TGTCAACCGCCAGGA TERM 2013 1793319 - 1793287 - g 90 -14.2 -3.16056 | overlap 1793286 1793281 AAAGTAAAATTAAAC GGCCTGAGTCCGGT GCAGT ACCGAAATCAGGCC ATGTCAACCGCCAGG YE1591 1792531 - 1793349 + | putative transposase for IS1664 element YE1592 1793716 - 1793399 - | hypothetical protein YE1593 1794963 - 1793779 - | hypothetical protein TERM 2014 1794326 - 1794338 + g 72 -10.5 -2.9294 | opp_overlap 1794323, overlap 1794334 TCGGCATAATTACGC GCCGC CAG GCGGC TATCTCGCTGGTCTA TERM 2015 1794460 - 1794474 + g 73 -5.6 -4.61482 | CCAGACAGTACCTTG GGTCAG TTC CAGACC TTCTTTTTTACGCAC YE1594 1795183 - 1795428 + | hypothetical protein YE1595 1795441 - 1795806 + | hypothetical protein YE1596 1795826 - 1796104 + | putative acylphosphatase YE1597 1796458 - 1796132 - | putative sulfite reductase subunit protein TERM 2016 1796196 - 1796227 + g 77 -4.4 -5.07486 | TTTGCCGGCCCTTGG GGAAATAGACGATA GAGA TAGCGGCTATTGCC TTTTTCTTCACCGTA TERM 2017 1797464 - 1797439 - H 100 -12 -5.85178 | AATAGGCAAAAAAAA CCCTTACCAA TCTCAT TTGGTAAGGG ATGCCAATTCGGCCA TERM 2018 1798427 - 1798411 - g 90 -5.7 -5.5112 | opp_overlap 1798412, overlap 1798412 GTTATCAATAAAAAA TCGACGG ATT CCGCCGT GTTTAAGTTAGCCCG TERM 2019 1798426 - 1798412 - g 76 -9.2 -3.89587 | opp_overlap 1798412, overlap 1798411 TTATCAATAAAAAAT CGACGG ATT CCGCCG TGTTTAAGTTAGCCC yenR 1798138 - 1798872 + | quorum-sensing transcriptional activator yenI 1799521 - 1798865 - | N-acylhomoserine lactone synthase TERM 2020 1798928 - 1798938 + g 77 -4 -5.01553 | TGGTTCAACCTGATG TACT CTC AGTA TTTTATTTATCAGTT TERM 2021 1799769 - 1799783 + H 76 -2.8 -5.36441 | opp_overlap 1799769 1799770, overlap 1799770 AATAAATGGTTATAA CGAAAC AAT GTTTCA TTTTTTGTCTAAAAA YE1601 1799809 - 1800741 + | exported membrane protein YE1602 1802579 - 1800852 - | potassium/proton antiporter TERM 2022 1802041 - 1802022 - G 80 -6.4 -4.76041 | overlap 1802024 CAGATGCACCAAAAA CATCCAGC TCAG GCTGGATT CACCGGCGGAAATCA TERM 2023 1802039 - 1802024 - G 78 -9 -3.99327 | overlap 1802022 GATGCACCAAAAACA TCCAGC TCAG GCTGGA TTCACCGGCGGAAAT TERM 2024 1802846 - 1802886 + r 100 -17.7 -3.05596 | opp_overlap 1802839 GAGATATAGCCAGAT CGCTCACCTTTCATTGCCC AGC GGGGAATCAAGGGTGAGCG TTGGATGAAAAACTA YE1603 1803240 - 1802899 - | hypothetical protein mdoC 1804494 - 1803355 - | glucans biosynthesis protein TERM 2025 1805291 - 1805280 - g 89 -5.8 -5.28826 | AAAGCGGATAAAAAA GACG AAAT CGTC AGCATGTTGGGTGCC mdoG 1804827 - 1806380 + | glucan biosynthesis protein G mdoH 1806418 - 1808955 + | glucosyltransferase MdoH TERM 2026 1808977 - 1808994 + T 84 -2.7 -5.72616 | gap 1 GTAAAAATAGAAAAA CGGGC-AT AGG ATGGCTCG TTTTTTTCTGTAAAT TERM 2027 1809884 - 1809910 + T 73 -10.1 -2.97771 | gap 1, overlap 1809879 1809883 CCTTCACTGGGGGCT CGACCCGCGCCA TCTC TGGCGCGGA-CG CTTTACTCTTCTACC YE1609 1811557 - 1810022 - | putative peptide transport protein TERM 2028 1811111 - 1811097 - G 75 -5.6 -4.76312 | opp_overlap 1811108 1811109, overlap 1811087 1811100 TAGAACAGTGAAAAA CCACCG TCG CGACGG GCATCACCCGGTTTA YE1610 1813235 - 1811991 - | MFS family transporter TERM 2029 1813497 - 1813473 - R 91 -7.7 -4.88711 | opp_overlap 1813485 ATAATAGAGTAAAAA GCCACAGCACC AGC GGCGCAGCAGC TTTTTTATCACATCA TERM 2030 1813485 - 1813497 + r 82 -4.7 -5.26316 | opp_overlap 1813473 AAAGCCACAGCACCA GCGGC GCA GCAGC TTTTTTATCACATCA YE1611 1813965 - 1813531 - | hypothetical protein htrB 1815265 - 1814333 - | lipid A biosynthesis lauroyl acyltransferase ttrR 1816012 - 1815509 - | tetrathionate reductase complex: two-component system response regulator TERM 2031 1815935 - 1815907 - G 82 -10.4 -3.86346 | gap 1 GCATCCGGGCATAAA CCGCAGTGCCATC AAGC AATGGCA-TGCGG ATATCGAGCAATACT ttrS 1817831 - 1816071 - | tetrathionate reductase complex: sensory transduction histidine kinase ttrB 1817970 - 1818704 + | tetrathionate reductase subunit B ttrC 1818701 - 1819786 + | tetrathionate reductase subunit C TERM 2032 1822111 - 1822097 - g 91 -11.4 -4.08216 | opp_overlap 1822101 CTATGGTGGCGAAAA GCCGCT GCC AGCGGC CGTTGATGACGAATT ttrA 1819779 - 1822862 + | tetrathionate reductase subunit A TERM 2033 1822887 - 1822922 + F 70 -3.6 -4.78752 | gap 1, opp_overlap 1822884 1822891, overlap 1822884 1822891 ATTTTAACCAATGGA TACATAAATCCCTTT CACTTGC AGAGGGATTTAT-TA TTTTTGCGTTATGAT TERM 2034 1822891 - 1822919 + F 76 -6.9 -4.48792 | opp_overlap 1822884 1822891, overlap 1822884 1822887 TAACCAATGGATACA TAAATCCCTTT CACTTGC AGAGGGATTTA TTATTTTTGCGTTAT YE1619 1823339 - 1824391 + | hypothetical protein TERM 2035 1824413 - 1824443 + F 100 -11.2 -5.82388 | opp_overlap 1824413 GTGCTATTAAAATAA GGCGTTGTCGGTTA TTT TATCCGATAACGTC TTTTTTTTGCCATTT TERM 2036 1824443 - 1824413 - f 74 -6.8 -4.25256 | opp_overlap 1824413 GTGCTATTAAAATAA GGCGTTGTCGGTTA TTT TATCCGATAACGTC TTTTTTTTGCCATTT tqsA 1824492 - 1825553 + | putative transport protein TERM 2037 1825568 - 1825596 + T 100 -12.6 -3.78022 | gap 1, opp_overlap 1825563 ATTTGAAAATCTGAG GCCAGCAGGTGAT TTCT AT-ACCTGCTGGC TTTACTCAATATCAG YE1621 1826647 - 1826063 - | LuxR family regulatory protein TERM 2038 1826875 - 1826836 - R 87 -8.3 -4.54343 | gap 2, overlap 1826827 AGAAATGCAAATAAA TTGCCAATAACTCATCTTA AAAG TAA-ATGAGT-ATTGGCAA CAATTTAATCAGCAA solA 1828027 - 1826906 - | N-methyltryptophan oxidase TERM 2039 1828253 - 1828228 - R 95 -7.7 -5.08088 | gap 1, opp_overlap 1828228 AACGGTTAATAAAAA GGCATCAAGTGA TAT TCACT-AATGCC TTTTTATGAGCGTTG TERM 2040 1828228 - 1828253 + r 75 -5.5 -4.8543 | gap 1, opp_overlap 1828228 AACGGTTAATAAAAA GGCATCAAGTGA TAT TCACTA-ATGCC TTTTTATGAGCGTTG bssS 1828545 - 1828291 - | biofilm formation regulatory protein BssS TERM 2041 1828742 - 1828722 - R 100 -10.4 -5.48054 | ATTAAAATGAAAAAA GCCGAGGA GCGAT TCCCCGGC AAAACAGCATTTACC TERM 2042 1828805 - 1828840 + r 100 -14.9 -4.4715 | opp_overlap 1828806, overlap 1828806 TGGCTACGCTCAATA ACCCGAATCACTTAC GACACA GTAAGTGATTCGGGA TTTTCTCACTTGCCG TERM 2043 1828806 - 1828839 + r 100 -18.4 -3.27808 | opp_overlap 1828806, overlap 1828805 GGCTACGCTCAATAA CCCGAATCACTTAC GACACA GTAAGTGATTCGGG ATTTTCTCACTTGCC TERM 2044 1828839 - 1828806 - R 100 -18.4 -3.63515 | opp_overlap 1828805 1828806 GGCTACGCTCAATAA CCCGAATCACTTAC GACACA GTAAGTGATTCGGG ATTTTCTCACTTGCC dinI 1829153 - 1828908 - | DNA damage-inducible protein I b1062 1830316 - 1829270 - | dihydroorotase TERM 2045 1830703 - 1830720 + G 73 -2.1 -5.02074 | gap 1 CATGCTGAAAGCGAC CA-AAAAG GCT CTTTTGTG TTTTTTGAGCGCTGG YE1626 1830565 - 1830852 + | hypothetical protein TERM 2046 1830889 - 1830874 - T 100 -11.8 -5.4505 | opp_overlap 1830874 TTGTTCAATAAAAAA CCCGCC AAAT GGCGGG TTTTGCACTATTAGG TERM 2047 1830874 - 1830889 + T 100 -11.8 -4.1964 | opp_overlap 1830874 TTGTTCAATAAAAAA CCCGCC AAAT GGCGGG TTTTGCACTATTAGG rne 1834452 - 1830922 - | ribonuclease E rluC 1835029 - 1835988 + | 23S rRNA pseudouridylate synthase C TERM 2048 1835996 - 1835977 - T 73 -7.2 -4.21974 | gap 1, opp_overlap 1835991 1835993, overlap 1835991 GTATTACGCAAGAAA GCCGCGATT TAA AAT-GCGGC TAGCCGTTTTAAAGC YE1629 1836620 - 1836039 - | Maf-like protein YE1630 1836762 - 1837292 + | hypothetical protein rpmF 1837298 - 1837465 + | 50S ribosomal protein L32 plsX 1837502 - 1838536 + | putative glycerol-3-phosphate acyltransferase PlsX fabH 1838543 - 1839508 + | 3-oxoacyl-(acyl carrier protein) synthase III TERM 2049 1839501 - 1839520 + F 75 -2.1 -5.37593 | overlap 1839503 GCTCAGCGCTGGTTC GCTTCTG ATTTAA CAGAACC TTTTTTGGTTTAACA TERM 2050 1839949 - 1839932 - g 74 -11.3 -2.80522 | overlap 1839931 AGTTGATGCAAGAAG CGGTACC TGAA GGTACCG GTGCCATGTACGCTA fabD 1839562 - 1840491 + | malonyl CoA-acyl carrier protein transacylase TERM 2051 1840586 - 1840598 + G 79 -10.5 -3.75024 | GAATTATTGGCTGAG CGCGG TGC CCGCG TTATTGGTACTGCGA fabG 1840505 - 1841239 + | 3-ketoacyl-(acyl-carrier-protein) reductase acpP 1841393 - 1841629 + | acyl carrier protein TERM 2052 1841654 - 1841679 + F 100 -11.9 -5.9873 | opp_overlap 1841654, overlap 1841655 CTTTAAGTTTAGATA GTTAGGCGGTC ACTC GACCGCCTAAG TTTTTTTTGTCCTAA TERM 2053 1841679 - 1841654 - f 86 -11.9 -2.91681 | opp_overlap 1841654 1841655 CTTTAAGTTTAGATA GTTAGGCGGTC ACTC GACCGCCTAAG TTTTTTTTGTCCTAA TERM 2054 1841655 - 1841678 + F 100 -15.4 -4.17611 | opp_overlap 1841654, overlap 1841654 TTTAAGTTTAGATAG TTAGGCGGTC ACTC GACCGCCTAA GTTTTTTTTGTCCTA TERM 2055 1842101 - 1842077 - g 71 -4.2 -4.67982 | gap 1, overlap 1842078 1842080 TCTGATTGAAGAAAA CCACACCGCGC TGGT GAACGGTG-GG CCACGTAAAATTAGC fabF 1841724 - 1842962 + | 3-oxoacyl-(acyl carrier protein) synthase II TERM 2056 1842988 - 1843015 + F 100 -12.8 -3.34455 | opp_overlap 1842993 1842995, overlap 1842993 TACGCTCCAGCTGCT TAAAAGACCCGG TTTT CCGGGGCTTTTA TTAACTTTGTCCTGC TERM 2057 1843010 - 1842993 - f 79 -8.3 -4.08767 | opp_overlap 1842993 1842988, overlap 1842995 TCCAGCTGCTTAAAA GACCCGG TTTT CCGGGGC TTTTATTAACTTTGT TERM 2058 1842993 - 1843010 + F 100 -8.3 -4.76213 | opp_overlap 1842993 1842995, overlap 1842988 TCCAGCTGCTTAAAA GACCCGG TTTT CCGGGGC TTTTATTAACTTTGT TERM 2059 1843008 - 1842995 - f 78 -9.5 -3.6422 | opp_overlap 1842993 1842988, overlap 1842993 CAGCTGCTTAAAAGA CCCGG TTTT CCGGG GCTTTTATTAACTTT TERM 2060 1843496 - 1843506 + G 71 -6.8 -4.15698 | opp_overlap 1843488, overlap 1843504 CACGACATGTCAGCA TCCG ACA CGGA TTATTTCTCTCAGTG pabC 1843200 - 1844024 + | 4-amino-4-deoxychorismate lyase TERM 2061 1844715 - 1844699 - g 78 -7.9 -4.36914 | overlap 1844701 CGTTGCCTTACAAAA CCCCAGG CGA CCTGGTG ACTATGGCGTCAATC yceG 1844086 - 1845111 + | hypothetical protein tdk 1845101 - 1845739 + | thymidylate kinase TERM 2062 1846205 - 1846215 + G 71 -6.8 -4.27617 | overlap 1846201 TGCTTGCGACACTGC GCAG CCG CTGC TTTTACTGGCATCTG holB 1845739 - 1846746 + | DNA polymerase III subunit delta' YE1642 1846761 - 1847570 + | putative metallodependent hydrolase TERM 2063 1848557 - 1848542 - g 70 -7.6 -3.85165 | CATTCCAAATGCAAA TTGGTG AATA CACCAA CGCAGCGGGTCAGGT glcA 1847878 - 1849311 + | glucose-specific PTS system IIBC components TERM 2064 1849352 - 1849333 - T 78 -9.2 -3.59979 | opp_overlap 1849334, overlap 1849334 TGTGGGGAGTGCAAA GGGGAGGC GAAA GCCTCCCT TTTTTTGTTGTTTTT TERM 2065 1849334 - 1849351 + T 100 -12.7 -6.04419 | opp_overlap 1849333 1849334 GTGGGGAGTGCAAAG GGGAGGC GAAA GCCTCCC TTTTTTTGTTGTTTT TERM 2066 1849351 - 1849334 - T 89 -12.7 -2.75844 | opp_overlap 1849334, overlap 1849333 GTGGGGAGTGCAAAG GGGAGGC GAAA GCCTCCC TTTTTTTGTTGTTTT ogr 1849729 - 1849385 - | phage late control protein TERM 2067 1849467 - 1849451 - G 93 -7.2 -5.4251 | opp_overlap 1849451 TTCAGATACAAAAAA GCCCGC ACGCG GCAGGC TGATTGAGAGCGGGG gpD 1850901 - 1849792 - | regulator of late gene expression TERM 2068 1850041 - 1849996 - G 93 -14 -3.60296 | overlap 1850027 CAGTGTCATGGTAAA TTCCGCCGCCCCCCGTTG CAGTTTTGAC CAACGGGCGGCAGCGGCA CGACGGGCGGCCCGT fI 1851043 - 1852221 + | major tail sheath protein fII 1852233 - 1852748 + | major tail tube protein gpE 1852764 - 1853087 + | putative phage tail protein gpE' 1852764 - 1853215 + | putative phage tail protein E' TERM 2069 1854066 - 1854041 - f 82 -3.2 -5.5208 | GCACAACAGAAAAAA GAGCTGTTGG ACTTTG CCAACGTCTC CGCCAAAGCATCCAA TERM 2070 1855722 - 1855686 - f 73 -7.2 -4.13767 | gap 1 CTGGTTACTTGAAAA GCTGGGCGC-TATCCCG AAAG CGGCAGATGCGGCCAGC GGTGCGGTGGCGGCG TERM 2071 1855844 - 1855834 - f 75 -8.2 -3.86897 | TGGAGTCCTGATAAA CCGG TGG CCGG AAACAGCAGCGCCAT TERM 2072 1855974 - 1855951 - f 90 -2.2 -5.95286 | overlap 1855952 1855953 1855955 AGTAAAAAGAAAAAA GGCAGCGGGG ATAG CCTCGCCAGC AGTTCACCGGTGACG TERM 2073 1856734 - 1856744 + G 73 -2.4 -5.03314 | opp_overlap 1856734 CCGGCATCAGCGAAA CCCG CAC CGAG TTTTTTAAGGATGGC gpU 1856433 - 1856843 + | putative phage tail protein YE1651 1856945 - 1857232 + | hypothetical protein TERM 2074 1857271 - 1857289 + T 87 -5.2 -5.52096 | TAGTGATTATTTATA GCTCGC CATTTAT GCGGGC TTTTTTATTACATTT YE1652 1857551 - 1857369 - | hypothetical protein YE1653 1857891 - 1857643 - | hypothetical protein TERM 2075 1857747 - 1857729 - GH 70 -6 -4.30995 | GTTGCCACAAAATAA GCGAAAGA ATC TCTTTAGC ATCGGCCCGATCAAC YE1654 1857891 - 1858259 + | hypothetical protein TERM 2076 1858379 - 1858352 - T 73 -8.5 -3.71174 | AATAAACAGCGCAAA CAGACGACGTT TAAGGC AACATCGCCTG TTAAAAGTAGGGATT YE1655 1859353 - 1858406 - | putative transposase TERM 2077 1858995 - 1858961 - G 70 -7.9 -3.9093 | gap 1, opp_overlap 1858972, overlap 1858963 1858964 GCCATGATAGAACAA CATGGGAATGACCAGC GGCA ACTGGTCGTTCCC-CG CTTCCAAGTGGCTCT TERM 2078 1858994 - 1858963 - G 71 -9.4 -3.53945 | opp_overlap 1858972, overlap 1858961 1858964 CATGATAGAACAACA TGGGAATGACCAGC GGCA ACTGGTCGTTCCCC GCTTCCAAGTGGCTC TERM 2079 1858993 - 1858964 - G 81 -12.9 -2.71644 | opp_overlap 1858972, overlap 1858963 1858961 ATGATAGAACAACAT GGGAATGACCAGC GGCA ACTGGTCGTTCCC CGCTTCCAAGTGGCT TERM 2080 1860096 - 1860139 + r 88 -9.7 -4.21974 | GTGATTAAAGGATGT TTATACCGCTTCCGCTA AAGATAATAG TAGCGGGAGCGGTGAAA TTTATTGCCTGGTCA YE1657 1860461 - 1860141 - | hypothetical protein YE1658 1861208 - 1860804 - | hypothetical protein YE1659 1861441 - 1861208 - | hypothetical protein TERM 2081 1861651 - 1861690 + r 73 -7.4 -4.08767 | gap 1, overlap 1861653 CATGCTGGTTTGGTT TTTCGTCCAGTTGTCTAAT AGG ATTAGACAA-TGGGTGATA TTTTCAAACGATAGA TERM 2082 1861653 - 1861688 + r 80 -10 -3.6422 | gap 1, overlap 1861651 TGCTGGTTTGGTTTT TCGTCCAGTTGTCTAAT AGG ATTAGACAA-TGGGTGA TATTTTCAAACGATA YE1661 1862537 - 1861923 - | putative phage tail fiber assembly protein gpH 1863919 - 1862537 - | variable tail fibre protein gpI 1864458 - 1863916 - | phage tail protein gpJ 1865359 - 1864451 - | baseplate assembly protein TERM 2083 1864490 - 1864501 + g 78 -5.8 -4.73682 | CAGCACGGCACTGGT GCAG TAAG CTGC TTTTGTGTTGTCCAG TERM 2084 1865317 - 1865335 + g 75 -10.2 -3.30243 | AATCCAGCGCTTCCA CTGCCAGC GGG GCGGGCAG TTGTGACAGGTCGAT gpW 1865706 - 1865356 - | baseplate assembly protein gpV 1866350 - 1865703 - | baseplate assembly protein TERM 2085 1865834 - 1865854 + g 73 -7.5 -4.1964 | ACATCTCACCGCCAT CGGTCACAT TCA AAGTGGCCG TTTTCAGATGTTGGG YE1667 1867045 - 1866458 - | putative Fic-related phage protein gpS 1867941 - 1867324 - | tail completion protein gpR 1868454 - 1867984 - | tail completion protein r lysB 1868978 - 1868553 - | phage lysin YE1672 1869378 - 1868983 - | putative phagelysin YE1672A 1869751 - 1869365 - | putative phage holin gpX 1869992 - 1869789 - | phage tail protein gpL 1870475 - 1869993 - | phage head completion/stabilization protein gpM 1871306 - 1870596 - | phage terminase/endonuclease subunit TERM 2086 1870627 - 1870643 + g 87 -6.5 -5.09426 | AATTCGGGATTGCTG GCCGC AACCAGC GCGGC TTTTTTCAGGTTCCG gpN 1872381 - 1871335 - | major phage capsid protein precursor TERM 2087 1872438 - 1872472 + r 83 -12.1 -2.76589 | gap 1, overlap 1872434 GATAGTGTCGTCGGT GCTGCCTTCCGGGCCA CCTT TGGCC-GGTGGGCGGC TAGTGTGTTGGCTAT gpO 1873268 - 1872414 - | putative phage capsid scaffolding protein TERM 2088 1873672 - 1873689 + G 77 -10.5 -3.53224 | GAAATAGATTTGCTG GCGCGCC AACT GGTGCGC TTTGACCGGCAACTG TERM 2089 1874346 - 1874331 - g 71 -4 -4.7657 | gap 1, overlap 1874333 CAAAAATCTGAAAAA CG-GCAA GAT TTGCGCG GATAGGCAATGGAAG TERM 2090 1875119 - 1875107 - g 76 -9.1 -3.86346 | opp_overlap 1875100 CGATTGGCGCAGAAA CCGGT AGC ACCGG CGGCGGCTTTGTTCA gpP 1873426 - 1875144 + | terminase, ATPase subunit TERM 2091 1875432 - 1875463 + G 80 -7.2 -4.55023 | overlap 1875430 CCGCACCCGTTACTG TCCCGCGCTGATGC CGGG GCATTCGTGCAGGA TTTTCTGGTGTTCGG gpQ 1875147 - 1876187 + | putative portal vertex protein YE1681 1877924 - 1876566 - | prophage encoded DNA modification methylase TERM 2092 1877744 - 1877755 + g 74 -3 -5.08824 | TATGAATGTCATGAT TATC GAGT GATA TTTTTTCACTCGCCC YE1682 1878452 - 1878009 - | hypothetical protein YE1683 1879427 - 1878468 - | putative prophage encoded two-component system response regulator TERM 2093 1878768 - 1878780 + g 73 -4.9 -4.7153 | CAAGTCCTCTAGCTG TTTAG GTT CTAAA TTTTTAAAATTCTTT YE1684 1881802 - 1879424 - | putative prophage encoded two-component system histidine kinase TERM 2094 1880867 - 1880886 + g 71 -6.4 -4.18058 | AGAGCCAAATTCTAC GACAGTCA ATCC TGTCTGTC TTTTAAAGTATGCTT gpA 1884420 - 1882132 - | phage replication protein TERM 2095 1884391 - 1884419 + g 74 -9.6 -3.46602 | gap 1 AGGTTGAGACGGGGT TGGGGGG-CGG CGTGAGTT CCGTCCCCCCA TTATGCTATCCCGCG TERM 2096 1884423 - 1884440 + r 70 -2.7 -5.05037 | overlap 1884425 TCCGTCCCCCCATTA TGCTATC CCGC GATAGTG TTTCTTTTTCTCTTC YE1687 1884644 - 1884420 - | hypothetical protein YE1688 1884871 - 1884644 - | hypothetical protein TERM 2097 1884776 - 1884790 + g 73 -8.6 -3.9644 | opp_overlap 1884776 1884775 TTCTGATAGATTAAG CGCAAA GGC TTTGCG TTCTTCTATTCGGGC YE1689 1885197 - 1884949 - | hypothetical protein YE1689A 1885514 - 1885233 - | hypothetical protein YE1690 1885795 - 1885529 - | phage DNA-binding protein cI 1885885 - 1886184 + | phage repressor protein TERM 2098 1886536 - 1886525 - g 75 -5.8 -4.57569 | TGATGGCCGCAAAAA TGGG CCAT CCCA AAGCGAGCCAAATCA int 1886248 - 1887231 + | P2-like phage integrase YE1693 1887316 - 1888287 + | hypothetical protein TERM 2099 1888373 - 1888419 + F 71 -2.3 -5.11063 | overlap 1888376 TACACCCATTTTAAG CACGCAGTTACAGGTATCTAA CTTAC TGATATTACTGTAACTGCTTG TTTTTATTAGGTGAT TERM 2100 1888438 - 1888455 + F 73 -2.5 -5.24129 | opp_overlap 1888438 1888439, overlap 1888439 TTATTAGGTGATAAA TGGCGGC TTTA GCCTCCC TTTTTTGTGCACAGA TERM 2101 1888492 - 1888474 - f 100 -14.6 -4.52589 | opp_overlap 1888474 1888485 TTTGTGCACAGAAAA CCTCCAGC TAG GCTGGAGG TTCCGTAAAGCTTTC TERM 2102 1888474 - 1888492 + F 100 -14.6 -3.07307 | opp_overlap 1888474, overlap 1888485 TTTGTGCACAGAAAA CCTCCAGC TAG GCTGGAGG TTCCGTAAAGCTTTC tnp 1888605 - 1889063 + | transposase for IS1541 TERM 2103 1889133 - 1889123 - T 71 -6.8 -4.15044 | GCGGCTGGTAACAAA GCCT TAC AGGC GCATATGAAAAACCT TERM 2104 1889139 - 1889171 + T 100 -11.3 -4.1891 | opp_overlap 1889146, overlap 1889143 1889145 1889146 CCTTACAGGCGCATA TGAAAAACCTCCGGC TAT GCCGGAGGATATTTA TTTGTGTTCAGAAAG TERM 2105 1889143 - 1889167 + T 100 -9.9 -4.68511 | opp_overlap 1889146, overlap 1889139 1889145 1889146 ACAGGCGCATATGAA AAACCTCCGGC TAT GCCGGAGGATA TTTATTTGTGTTCAG TERM 2106 1889145 - 1889165 + T 100 -12.5 -3.94393 | opp_overlap 1889146, overlap 1889143 1889139 1889146 AGGCGCATATGAAAA ACCTCCGGC TAT GCCGGAGGA TATTTATTTGTGTTC TERM 2107 1889146 - 1889164 + T 100 -16 -2.95009 | opp_overlap 1889146, overlap 1889145 1889143 1889139 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTTGTGTT TERM 2108 1889164 - 1889146 - T 100 -16 -4.8048 | opp_overlap 1889146 1889145 1889143 1889139 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTTGTGTT YE1695 1890057 - 1889227 - | hypothetical protein YE1696 1891669 - 1890125 - | putative ABC transport protein, ATP-binding component TERM 2109 1890648 - 1890625 - G 73 -5.2 -4.63218 | overlap 1890630 CGCCGTCGAATAAAA TAGAACCGCA CTTT TGCGGGACTA AACCGCCCATGCATT TERM 2110 1890643 - 1890630 - G 73 -8.1 -4.0865 | overlap 1890625 TCGAATAAAATAGAA CCGCA CTTT TGCGG GACTAAACCGCCCAT TERM 2111 1891462 - 1891474 + g 90 -9.1 -4.59773 | opp_overlap 1891450 AACGCGACCTGACAT CGCCA ATA TGGCG TTTTTCAAAGTAGGA YE1697 1892450 - 1891740 - | hypothetical protein YE1698 1893847 - 1892594 - | hypothetical protein TERM 2112 1893789 - 1893801 + g 75 -7.7 -4.27443 | AGCATAACTCTACCC TCGCT TCC AGCGA TTATTTTCATACTGG TERM 2113 1893856 - 1893838 - G 100 -13.8 -4.58424 | opp_overlap 1893831 GATGAGTATACAAAA GGGCCACC AAT GGCGGCCC TACTGGATGATTAAA YE1699 1896220 - 1894430 - | putative ABC-transport protein, solute binding component TERM 2114 1894553 - 1894538 - G 74 -9 -3.68569 | CCAGTGATGGAATAA TGGCTG CAAC CAGCCA TTGGCGATGATCTCT YE1700 1896368 - 1897189 + | shikimate 5-dehydrogenase YE1701 1897265 - 1897618 + | purine nucleoside phosphoramidase TERM 2115 1897658 - 1897672 + G 82 -5.6 -5.07486 | TGAGGTAAGCCTATG CGCCCT GTG AAGGCG TTTTTATTGCCGATG ycfL 1897655 - 1898044 + | putative lipoprotein YE1703 1898186 - 1898680 + | putative lipoprotein TERM 2116 1898748 - 1898707 - f 100 -16.1 -3.64822 | gap 1, opp_overlap 1898710 1898715, overlap 1898710 1898715 ATGCGCTTATTGAAA GGATAAAACCGTCGGTGGAT ATT ACCC-CCGACGGTTTTATTC ATGCAGCCGATTTTA TERM 2117 1898710 - 1898745 + F 100 -16.3 -3.14463 | opp_overlap 1898707 1898710 1898715, overlap 1898715 CGCTTATTGAAAGGA TAAAACCGTCGGTGG ATATTA CCCCCGACGGTTTTA TTCATGCAGCCGATT TERM 2118 1898745 - 1898710 - f 100 -16.4 -2.94144 | gap 1, opp_overlap 1898710 1898715, overlap 1898707 1898715 CGCTTATTGAAAGGA TAAAACCGTCGGTGGAT ATT ACCC-CCGACGGTTTTA TTCATGCAGCCGATT TERM 2119 1898740 - 1898715 - f 100 -11.9 -4.62168 | gap 1, opp_overlap 1898710 1898715, overlap 1898710 1898707 ATTGAAAGGATAAAA CCGTCGGTGGAT ATT ACCC-CCGACGG TTTTATTCATGCAGC TERM 2120 1898715 - 1898740 + F 100 -11.8 -4.71426 | opp_overlap 1898715 1898710 1898707, overlap 1898710 ATTGAAAGGATAAAA CCGTCGGTGG ATATTA CCCCCGACGG TTTTATTCATGCAGC TERM 2121 1899371 - 1899385 + G 74 -2.8 -5.0133 | CAATGGTTGGTCAGC GCCT CAGCAAC AGGC TTTTTTACAGCACTA YE1704 1898898 - 1899581 + | hypothetical protein ycfO 1899737 - 1900762 + | beta-hexosaminidase YE1706 1900765 - 1901307 + | hypothetical protein TERM 2122 1901373 - 1901411 + F 100 -13.4 -4.82901 | CTGTTCTGTGCAATT TGGCTTGAAAAAAGCG TGTCGTC TGCTTTTTTCAGGCCA TTTTTATGACAAAAA ndh 1901695 - 1902999 + | NADH dehydrogenase ycfJ 1903698 - 1904237 + | hypothetical protein TERM 2123 1904334 - 1904367 + T 100 -14.7 -3.22091 | opp_overlap 1904333 1904331 GAGTGGCATTAACAT TGGCGCGGGTTTC TCACATCT GAAACCCGCGTCA TTAATGGCTTAAGCT mfd 1907822 - 1904376 - | transcription-repair coupling factor TERM 2124 1905583 - 1905605 + g 79 -9.8 -3.85698 | opp_overlap 1905575, overlap 1905585 1905588 AGAATATCGACATCG GCGCGCATCG CTT TGATGCGCTC TTTATGGCGCACACC TERM 2125 1905585 - 1905603 + g 79 -11 -3.51934 | overlap 1905583 1905588 AATATCGACATCGGC GCGCATCG CTT TGATGCGC TCTTTATGGCGCACA TERM 2126 1905588 - 1905629 + g 73 -10.1 -3.21218 | opp_overlap 1905624, overlap 1905585 1905583 ATCGACATCGGCGCG CATCGCTTTGATGCGCTCT TTAT GGCGCACACCGAAGCGATG TTCCTCATCGACAAT TERM 2127 1907128 - 1907157 + g 77 -4.3 -5.03994 | ACTTCGAACTGTTCA CGCCATTGGCT GCGGAATA ATTCAATGGCG TTTTTATCTATCGGG TERM 2128 1908198 - 1908214 + G 77 -6.5 -4.5123 | overlap 1908177 TGCGCGGGCGTGCAT CTGACCG TTT TGGTCGG TTTGTTTCATGGCTT TERM 2129 1908617 - 1908633 + G 71 -10.1 -2.82516 | CAATTGGGGGTTAAG CGCGGTG AAA CACTGCG TCTAATGGTGCCAAG TERM 2130 1909178 - 1909188 + G 74 -6.8 -4.34737 | TTGAATACCATTATC CCGA TTC TCGG TTTATTGATTGATGG lolC 1908143 - 1909345 + | outer membrane-specific lipoprotein transporter subunit LolC lolD 1909338 - 1910042 + | lipoprotein transporter ATP-binding subunit TERM 2131 1910393 - 1910374 - g 91 -11.4 -4.18018 | CGGTTTGATTGAAAA CGGCACAC AGTT GCGTGCCG TACAGGTCAAAGGTG TERM 2132 1910986 - 1911014 + G 74 -11.1 -2.87522 | opp_overlap 1910990, overlap 1910990 ACGCACATTAGGCGC TAAAGATGGCCTG ATA CGAGCCATCTTTA TCTGGTATGGCTTGA TERM 2133 1910990 - 1911010 + G 71 -7.5 -4.11404 | opp_overlap 1910990, overlap 1910986 ACATTAGGCGCTAAA GATGGCCTG ATA CGAGCCATC TTTATCTGGTATGGC lolE 1910054 - 1911301 + | outer membrane-specific lipoprotein transporter subunit LolE YE1713 1911367 - 1912278 + | N-acetyl-D-glucosamine kinase TERM 2134 1912684 - 1912701 + G 74 -4.1 -4.91109 | overlap 1912685 AGGGTATCGTCGTGA CCCTGAA CTGG TTCAGGC TTTTTATAATGCACG cobB 1912439 - 1913275 + | NAD-dependent deacetylase TERM 2135 1913665 - 1913649 - g 71 -6.5 -4.30448 | AAAGCCAATGTAAAA TCCGTGC CGA GCACTGA AGGGCAGCGCAAGCT pepT 1913580 - 1914815 + | peptidase T TERM 2136 1914972 - 1914990 + T 100 -11.7 -4.58395 | TGTCAGCAGTCTGAA TGCCCCG TTTAC CGGGGCA TTTTTGCGGAATAAG YE1716 1916136 - 1915015 - | hypothetical protein phoQ 1917675 - 1916221 - | sensor protein PhoQ TERM 2137 1917513 - 1917541 + g 88 -8.2 -4.83615 | opp_overlap 1917513 1917512 AGCTGAAGAATAAAT TACTTTCACCGC GATGG GCGCTGAAGGTA TTTTTATCAAAGCTG phoP 1918352 - 1917681 - | DNA-binding transcriptional regulator PhoP TERM 2138 1918399 - 1918379 - R 71 -9.8 -2.63633 | overlap 1918378 CGATAAGACATTAAC CGGGTAAT CTAAT ATTACCCG ACAAGTAAAAATGAG YE1719 1919047 - 1918424 - | putative lipoprotein TERM 2139 1919193 - 1919218 + r 79 -11.2 -3.04263 | opp_overlap 1919192 AGGATAAGAAATTAT TCAGGTGGCG TTGATT TGCCACCTGA TGTTGAGGCTAAAGT purB 1920605 - 1919235 - | adenylosuccinate lyase YE1721 1921257 - 1920631 - | hypothetical protein trmU 1922503 - 1921382 - | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase TERM 2140 1922426 - 1922400 - G 71 -6.4 -4.24342 | opp_overlap 1922401 TTCTTCATGAACAAA CCGGCAACTTGG TAG CCCTGTTGCTGG AGCAGGTAGGCGGAA YE1723 1923136 - 1922690 - | hypothetical protein ymfC 1923755 - 1923129 - | putative pseudouridine synthase icd 1923886 - 1925139 + | isocitrate dehydrogenase TERM 2141 1925186 - 1925159 - f 73 -9.8 -3.05844 | opp_overlap 1925160 GCTTCGAGTGCAATA TCTCACGGAGGC TTCG GCTTCCGTGAGT TTTTAACGCTCCACT TERM 2142 1925160 - 1925185 + F 100 -15.5 -4.59773 | opp_overlap 1925159 CTTCGAGTGCAATAT CTCACGGAGGC TTCG GCTTCCGTGAG TTTTTAACGCTCCAC TERM 2143 1925458 - 1925405 - f 100 -14 -3.86944 | gap 1, opp_overlap 1925424 1925425 TCGAGAAGCAGTAAA GGGGCAGTAAGACGTTCA-ATGCGT TTACC ACTCAAGTGAACGCCTTTCTGCCCC CCCTTCGGTAGTATA TERM 2144 1925935 - 1925919 - g 73 -8.7 -3.9461 | opp_overlap 1925905, overlap 1925922 CGTGGTTAAGAATAA CCACTGA TAT CCAGTGG AATCAGGCTGGCTCC YE1726 1925672 - 1926532 + | hypothetical protein YE1727 1926684 - 1927904 + | putative inner membrane protein TERM 2145 1927942 - 1927963 + T 100 -5.9 -5.75478 | gap 1, opp_overlap 1927942 1927937 CGTAAATCTAGAAAA CAGGTGCATA AAA TA-GCGCCTG TTTTTTTATCTGCTT TERM 2146 1929444 - 1929426 - T 100 -10.3 -5.1356 | CGCTACCAATAAAAA GCCCTCA ATGAG TGAGGGC TGGGGGCTAACGGTT YE1730 1929711 - 1929451 - | hypothetical protein aer 1931444 - 1929885 - | putative methyl-accepting chemotaxis protein TERM 2147 1931414 - 1931429 + g 80 -9 -4.20783 | GACCAATGGGATACT CCTGTC GGCT GACAGG TTTGTTCACTCGCAT TERM 2148 1932017 - 1931987 - R 73 -6 -4.42386 | opp_overlap 1931988 1932013, overlap 1931988 TTCTTATTGAGAAAA CGACGCACCGGAAC ATC GGTCAAGCGCGTCA TTTGATGGTTGCTAT umuC 1933283 - 1932015 - | putative UV protection and mutation protein umuD 1933696 - 1933283 - | putative UV protection and mutation protein YE1735 1934339 - 1934653 + | IS1669 hypothetical protein TERM 2149 1935467 - 1935435 - g 100 -16.5 -3.63744 | opp_overlap 1935440, overlap 1935440 TCTGTCGTTAAAATA CAAAACGCCCGATGA AGT TCATCAGGCGTTTTA AGGCTGAAAAGTGTC TERM 2150 1935440 - 1935462 + G 95 -12 -4.11216 | opp_overlap 1935435 1935440 CGTTAAAATACAAAA CGCCCGATGA AGT TCATCAGGCG TTTTAAGGCTGAAAA TERM 2151 1935462 - 1935440 - g 100 -14.2 -4.89567 | opp_overlap 1935440, overlap 1935435 CGTTAAAATACAAAA CGCCCGATGA AGT TCATCAGGCG TTTTAAGGCTGAAAA YE1736 1934671 - 1935468 + | putative transposase for insertion element IS1669 TERM 2152 1936019 - 1936054 + T 81 -11.2 -3.28712 | overlap 1936021 TTAAGATAGGGGCAG AGTGTGACCAGTAGCT CTAA AGCTACCGGTCACATG TTATGGCGGAAAGAA TERM 2153 1936021 - 1936052 + T 100 -16 -3.21276 | overlap 1936019 AAGATAGGGGCAGAG TGTGACCAGTAGCT CTAA AGCTACCGGTCACA TGTTATGGCGGAAAG YE1738 1936927 - 1936070 - | hypothetical protein TERM 2154 1936240 - 1936265 + g 80 -4.7 -5.0916 | CGGCACCAATCAGCG CTTGCTTGAAG TCAG CTTCAGACAGG TTTTTGTATTCCACG TERM 2155 1937120 - 1937109 - H 90 -4.4 -5.63103 | GTTTAAGGAAAAAAA CGAT AAAA ATCG CTAAGAACTCGCCCT YE1739 1937261 - 1937602 + | hypothetical protein TERM 2156 1937618 - 1937647 + T 100 -14.3 -3.58726 | opp_overlap 1937604 1937624 ACGGTCAATTTTCGA CAGCAACCCGGGT ATGC GCCCTGGTTGCTG TTATCTCTAACCCCA YE1740 1937950 - 1937666 - | hypothetical protein YE1742 1939542 - 1938628 - | putative inner membrane protein TERM 2157 1939946 - 1939934 - gR 77 -6.2 -4.58395 | opp_overlap 1939926 GGCAGGGTGGAAAAA CGGC GGGGG GCCG GATCGTTTTTGCATT TERM 2158 1940458 - 1940442 - gR 76 -7.9 -4.07885 | CAGTTTGTGTTAAAA GCTCGTC TAT GCCGAGC AGATCAATTGATAAG YE1743 1939494 - 1940600 + | AraC family transcriptional regulator YE1744 1941013 - 1940624 - | hypothetical protein TERM 2159 1940981 - 1940997 + g 80 -3.1 -5.42198 | GAGTGGTAGTATCAG TAATGTT GCC AATATTA TTTTCTTTTTTCGCA TERM 2160 1941084 - 1941042 - R 77 -6.2 -4.61824 | opp_overlap 1941052, overlap 1941033 1941052 TAATAATAACTAAAA GTCACAGAAAGCCCCTCCTC AGT AAGGTGGGGCTTTGAATGAT ATGACATTTATTTCT TERM 2161 1941074 - 1941052 - R 93 -11.2 -4.12901 | opp_overlap 1941052, overlap 1941042 TAAAAGTCACAGAAA GCCCCTCCTC AGT AAGGTGGGGC TTTGAATGATATGAC TERM 2162 1941052 - 1941074 + r 82 -10.5 -3.70149 | opp_overlap 1941052 1941042 TAAAAGTCACAGAAA GCCCCTCCT CAGTA AGGTGGGGC TTTGAATGATATGAC hdeB 1941403 - 1941092 - | acid-resistance protein YE1746 1942268 - 1943590 + | hypothetical protein TERM 2163 1943646 - 1943614 - T 100 -13.6 -4.0827 | opp_overlap 1943612 1943610 ATAGATGTAGAGAAA TGTGAGGTAGGAAG AGGGA CTTACTACCTCACA AATATTCGGTATATA YE1747 1944652 - 1943804 - | hypothetical protein TERM 2164 1944726 - 1944741 + r 82 -6.8 -4.86133 | AGTTTACCATTCGAG CCCATC TGCG GGTGGG TTTTTACTGTGTATC YE1748 1946473 - 1944755 - | putative ABC transporter ATP-binding protein YE1749 1946673 - 1947092 + | putative acetyltransferase TERM 2165 1947175 - 1947157 - f 73 -6 -4.48997 | overlap 1947154 GAACGAATAAAACAA TGCTCAAC TCA GTTCAGCA ATACACCAATGTACG TERM 2166 1947506 - 1947531 + G 87 -6.7 -5.07652 | ATCGCCTGGGTTATT GCCGGGGGCGG CATG CTGACTCTGGC TTTTGTTTTCCAGAC TERM 2167 1947770 - 1947780 + G 73 -5.4 -4.55023 | overlap 1947778 GCCTCATTCATTTTG TGGA GTT TCCA TTTTATGGTGTTACG YE1750 1947359 - 1948861 + | amino acid permease TERM 2168 1949034 - 1949021 - f 76 -8.1 -4.07885 | GATCGCGTTGTAAAA GCCTG CAGT CAGGC TAGCGCTAGTATGAT YE1752 1949296 - 1949460 + | hypothetical protein YE1753 1949905 - 1949519 - | AraC family transcription regulator TERM 2169 1950304 - 1950331 + H 80 -2.9 -5.42862 | gap 2 GACTTCTCTTCCGAA CCAGGTGATTGAT AACT ATCAA--ACCTGG TTTTTTTACACCTAT TERM 2170 1950547 - 1950521 - H 72 -9.5 -3.18571 | opp_overlap 1950521 1950517, overlap 1950517 1950515 TCGGCTAAAGATATA TGCCCAAGG GCGTGATAT CCTTGGGCA ATATTATTGTGAAGG TERM 2171 1950521 - 1950547 + H 74 -10.2 -2.68545 | opp_overlap 1950517 1950515 1950521, overlap 1950517 TCGGCTAAAGATATA TGCCCAAGGG CGTGATA TCCTTGGGCA ATATTATTGTGAAGG YE1756 1950571 - 1950810 + | hypothetical protein YE1757 1951115 - 1950903 - | hypothetical protein TERM 2172 1951034 - 1951044 + g 85 -4.6 -5.47218 | opp_overlap 1951034 TACATTGCAAACCGA TGCC TGC GGCG TTTTTTTCGCTGCCA TERM 2173 1951577 - 1951565 - H 74 -4.9 -4.83593 | opp_overlap 1951568 AATAACCAGTAAAAA CTATT TCT AATAG TTAGAGGTTAATGAC YE1758 1951825 - 1952100 + | hypothetical protein TERM 2174 1952110 - 1952139 + F 77 -10.8 -2.77999 | opp_overlap 1952106, overlap 1952104 1952107 1952132 1952137 AGGTAAACTCACCGA CTCTGGCGCTGT GGGTTG ACAGTGTCAGAG TGATATTCATCCCTC YE1759 1952302 - 1952601 + | hypothetical protein YE1760 1952684 - 1952953 + | hypothetical protein TERM 2175 1953667 - 1953692 + G 74 -9.7 -3.52102 | GGCGCGTATCTGTTG GCATCTGGCTC AGGC GGGCCAAATGC TTCTGTCACTAACCT aroP 1953145 - 1954536 + | aromatic amino acid transport protein TERM 2176 1954561 - 1954590 + T 100 -8.5 -5.26875 | opp_overlap 1954561 TATATGGCGCTAAAA TAGCCGGGCAGCA ACAA TGAAGCTCGGCTA TTTTTTACTTAAAAA YE1762 1955392 - 1954778 - | palmitoyl transferase for Lipid A TERM 2177 1955833 - 1955857 + H 71 -2.1 -5.22794 | overlap 1955834 GTTCGATATTTTGAA CCGTTTTTCTT GAA GAGAAAATCGA TTTTTTCCTGCTTGT YE1764 1956382 - 1956498 + | hypothetical protein cspC1 1956541 - 1956750 + | cold shock-like protein CspC TERM 2178 1956788 - 1956773 - T 78 -7.5 -4.56597 | opp_overlap 1956773 TTTTGCTGTTAAAAA CCCGC CTTTGT GCGGG TTTTTTTGTTTCAGG TERM 2179 1956773 - 1956788 + T 100 -7.5 -5.95539 | opp_overlap 1956773 TTTTGCTGTTAAAAA CCCGC CTTTGT GCGGG TTTTTTTGTTTCAGG YE1766 1957547 - 1956828 - | hypothetical protein ftsI2 1957750 - 1959459 + | peptidoglycan synthetase rrmA 1959577 - 1960437 + | 23S rRNA methyltransferase A YE1769 1960878 - 1960600 - | hypothetical protein YE1770 1963121 - 1961046 - | hypothetical protein TERM 2180 1964576 - 1964525 - g 71 -3.8 -4.77438 | gap 2, opp_overlap 1964566 ATTCATGACCAAAAA GAGCGCACT-ACCGCAGT-TTCTA CCGGTT TAGATTACCGTGGCGAGCGCGCTC GTACTTCTTTAGATG fcuA 1963919 - 1965973 + | ferrichrome receptor protein TERM 2181 1966008 - 1966033 + T 100 -12.7 -4.95618 | gap 1, opp_overlap 1966008 TTAAACGACAAAAAA CCCCGCTATTCA TCT TGAAT-GCGGGG TTTCTTTTTACTCTT TERM 2182 1966033 - 1966008 - T 100 -12.7 -5.42265 | gap 1, opp_overlap 1966008 TTAAACGACAAAAAA CCCCGCTATTCA TCT TGAAT-GCGGGG TTTCTTTTTACTCTT yebN 1966672 - 1966103 - | hypothetical protein TERM 2183 1966366 - 1966377 + g 76 -2.2 -5.25805 | opp_overlap 1966357 1966364 CCAGAACCCAGAAGC TGTG ACTG CGCA TTTTTTCGGTTTCTT yobD 1967574 - 1967113 - | hypothetical protein TERM 2184 1967613 - 1967596 - R 100 -10.5 -5.63517 | opp_overlap 1967596 CTCCTAAATAAAAAA CCGGGAG TAAC CCCCCGG TTTCAGGCTACTGAT TERM 2185 1967596 - 1967613 + r 73 -8.3 -3.58522 | opp_overlap 1967596 CTCCTAAATAAAAAA CCGGGAG TAAC CCCCCGG TTTCAGGCTACTGAT TERM 2186 1967749 - 1967766 + r 71 -8.3 -3.54129 | CTCCTTAACCTCAGA CCGGGAG TAAC CCCCCGG TTTCAGCCAAATCTA gptB 1968654 - 1967791 - | mannose-specific PTS system protein IID TERM 2187 1968097 - 1968126 + g 80 -9.3 -4.18494 | TTTTTGCAGCAGGCC GCCGTCCATATCG CTGA CGATATTGACGCC TTTTGAATAACCGTA TERM 2188 1968310 - 1968277 - G 73 -9.5 -3.3452 | CACAGTACCCCAGAA GATTGGGTCACCGAC ACCG GCCAGTGGCCCCATC AGACCGACTTTAATC manY 1969485 - 1968688 - | PTS system, mannose-specific IIC component gptB 1970668 - 1969703 - | PTS system, mannose-specific IIAB component TERM 2189 1970211 - 1970233 + g 74 -9 -3.64703 | opp_overlap 1970211 TCATCCGGACCTAAA GCGACGGCAG GAG CTGCAGCCGC TTTGCGTACAGCAGC TERM 2190 1970233 - 1970211 - G 81 -11.2 -3.65351 | opp_overlap 1970211 TCATCCGGACCTAAA GCGACGGCAG GAG CTGCAGCCGC TTTGCGTACAGCAGC yoaE 1971438 - 1972982 + | hypothetical protein TERM 2191 1973013 - 1973038 + T 100 -9.7 -5.17353 | opp_overlap 1973013, overlap 1973015 AAGAGTTTCAGCTAA TGCGGGTCATC TTAA GGTGGCCCGTA TTTTTTGATGGATAT TERM 2192 1973015 - 1973036 + T 88 -10.1 -4.2131 | opp_overlap 1973013, overlap 1973013 GAGTTTCAGCTAATG CGGGTCATC TTAA GGTGGCCCG TATTTTTTGATGGAT TERM 2193 1973143 - 1973132 - T 75 -3 -5.1634 | AGAAATATATAAAAA CAAT ATTT ATTG TGAGATATATGTTTT TERM 2194 1973506 - 1973527 + T 70 -3.7 -4.8543 | AAATTCTTTTTCTGT TATTGACAC CACT GCGTCGATA TTTTTGTACCCATTC TERM 2195 1973848 - 1973819 - T 100 -16.5 -3.06133 | opp_overlap 1973825, overlap 1973821 1973825 TAATCTTTTACTTAA CAGCAAGGGGAGC GCTG GCTCCCCTTGGTG AACATGATTTTCACT TERM 2196 1973846 - 1973821 - T 100 -13.3 -3.08798 | opp_overlap 1973825, overlap 1973819 1973825 ATCTTTTACTTAACA GCAAGGGGAGC GCTG GCTCCCCTTGG TGAACATGATTTTCA TERM 2197 1973825 - 1973842 + T 93 -12.7 -3.16039 | opp_overlap 1973821 1973819 1973825 TTTACTTAACAGCAA GGGGAGC GCTG GCTCCCC TTGGTGAACATGATT TERM 2198 1973842 - 1973825 - T 95 -12.7 -3.38072 | opp_overlap 1973825, overlap 1973821 1973819 TTTACTTAACAGCAA GGGGAGC GCTG GCTCCCC TTGGTGAACATGATT sdaA 1975236 - 1973872 - | L-serine dehydratase TERM 2199 1975265 - 1975297 + r 73 -7.2 -4.22678 | gap 1, overlap 1975249 AACAAAGCTTTTTGT TATTCTTGGTGCGTA TGAA TACGC-CAAAGAATA TTTATATTAAGTATA TERM 2200 1975612 - 1975624 + r 80 -4.8 -5.09426 | TAGAGATCGCTTTAT GCTG TAATT CAGC TTTTTTAGCCTTAAG YE1780 1976276 - 1975689 - | hypothetical protein pabB 1977659 - 1976289 - | para-aminobenzoate synthase component I YE1782 1977842 - 1978099 + | hypothetical protein TERM 2201 1978242 - 1978216 - T 73 -10.1 -2.97771 | gap 1, opp_overlap 1978221 1978241, overlap 1978215 GGTAGAAGAGTAAAG CG-TCCGCGCCA CGGA TGGCGCGGGTCG AGCCATCAGGGATGC TERM 2202 1978221 - 1978257 + T 79 -8.5 -4.17048 | opp_overlap 1978216 1978215, overlap 1978241 AAGAGTAAAGCGTCC GCGCCACGGATGGCGCG GGT CGAGCCATCAGGGATGC TTGTTTTAACAAAGA purT 1979536 - 1978355 - | phosphoribosylglycinamide formyltransferase 2 TERM 2203 1980430 - 1980449 + G 73 -5.6 -4.58663 | ATGATGGCGATGAAG CGCCGGCT ATCG AGCAGGTG TTTTTCGAAACTACT TERM 2204 1980580 - 1980549 - g 80 -4.4 -5.27779 | gap 1, overlap 1980552 1980570 TGTAATACCAAAAAA GATTGCCAGAGCGTC TAC GAAGCCCTGG-AGTC CCGTGGCATCAGTGT dbpA 1979790 - 1981172 + | ATP-dependent RNA helicase DbpA YE1786 1981268 - 1981588 + | hypothetical protein YE1787 1981628 - 1981936 + | hypothetical protein YE1788 1982039 - 1982398 + | hypothetical protein ptrB 1982588 - 1984642 + | oligopeptidase B exoX 1985316 - 1984654 - | exodeoxyribonuclease X TERM 2205 1984729 - 1984758 + g 76 -10.8 -3.19038 | opp_overlap 1984731 GGCCAGCATCCAACG CAGATAGTCCGG ATCTTG TCGGGCTATCTG TTCAATACTTTTCCC TERM 2206 1985599 - 1985626 + r 82 -5.6 -4.93877 | opp_overlap 1985606, overlap 1985602 ACTTGGTAACTCATT GAACTGACAGTA GATT TACTGTTGGCTC TTTTATTTACTGAAG YE1791 1986633 - 1985629 - | transposase for insertion sequence element IS1328 TERM 2207 1986017 - 1986031 + g 73 -2.1 -5.15381 | overlap 1986018 CGTTGTGCTGTTTCA TCATC GGCCA GATGG TTTTTTAACTCTCTT TERM 2208 1986680 - 1986656 - H 100 -10 -5.26119 | opp_overlap 1986679 CCTCCAAAAAGAAAA CCCTGTCAGC TTACC GCTCACAGGG TGGGGGTGACCATCT TERM 2209 1986702 - 1986719 + H 73 -9.8 -3.05384 | opp_overlap 1986702 TGACCATCTCATTAA CCCGCC TGGCGT GGCGGG TTGACTGACGAGACG TERM 2210 1986719 - 1986702 - H 74 -9.8 -3.17212 | opp_overlap 1986702 TGACCATCTCATTAA CCCGCC TGGCGT GGCGGG TTGACTGACGAGACG TERM 2211 1987620 - 1987636 + G 73 -2.1 -5.1101 | overlap 1987622 TTGGATTGGTATTAT CAGGATG GCG CTTCCCG TTTTTTCCCTGATAA pip 1987170 - 1988126 + | proline iminopeptidase TERM 2212 1988142 - 1988168 + T 74 -5 -4.7871 | opp_overlap 1988144, overlap 1988143 1988144 CCATTGTCGCCGACA AACTCCCGCAGA CCC TGTGCGGGAGCC TTTTTGCTCATGATT TERM 2213 1988143 - 1988167 + T 71 -8.5 -3.46141 | opp_overlap 1988144, overlap 1988142 1988144 CATTGTCGCCGACAA ACTCCCGCAGA CCC TGTGCGGGAGC CTTTTTGCTCATGAT TERM 2214 1988144 - 1988166 + T 83 -12 -2.66962 | opp_overlap 1988144, overlap 1988143 1988142 ATTGTCGCCGACAAA CTCCCGCAGA CCC TGTGCGGGAG CCTTTTTGCTCATGA TERM 2215 1988166 - 1988144 - T 100 -12 -3.85817 | opp_overlap 1988143 1988142 1988144 ATTGTCGCCGACAAA CTCCCGCAGA CCC TGTGCGGGAG CCTTTTTGCTCATGA holE 1988409 - 1988176 - | DNA polymerase III subunit theta TERM 2216 1988580 - 1988590 + H 70 -5.4 -4.49756 | opp_overlap 1988580 1988578 ATTTCAGCGCAAATA GGAA TCA TTCC TTTTAGTATTTACAC ftn 1988793 - 1989302 + | ferritin TERM 2217 1989326 - 1989367 + F 100 -8.2 -5.62045 | gap 2 CTTGATTTGAACTTG CCGCAGTTTCT--ATCCACT GCTT AGTGGAACCGGAAACTGCGG TTTTTTATTGTATAT YE1796 1989693 - 1990079 + | putative copper resistance protein YE1797 1990081 - 1990965 + | putative copper resistance protein D yebY 1991047 - 1991403 + | hypothetical protein TERM 2218 1991636 - 1991666 + T 80 -4.8 -5.09521 | overlap 1991638 CAAGAGCCATTTCCC TAGACCGAATAT AGGAATC GTATTCGGTCTC TTTTTAATTTGTTGA TERM 2219 1991638 - 1991664 + T 73 -7.4 -4.15237 | overlap 1991636 AGAGCCATTTCCCTA GACCGAATAT AGGAATC GTATTCGGTC TCTTTTTAATTTGTT int 1992855 - 1991800 - | phage integrase TERM 2220 1992718 - 1992753 + gT 71 -6.8 -4.14739 | opp_overlap 1992717, overlap 1992706 1992705 1992722 AATGGCCTGAGAGAT GGCATCCCTCCGGG CTATTTGT CCCAGAGGGATCTC TTTTCCAGTAAGTGG TERM 2221 1992722 - 1992749 + gT 71 -8.4 -3.41366 | opp_overlap 1992717, overlap 1992706 1992705 1992718 GCCTGAGAGATGGCA TCCCTCCGGG CTATTTGT CCCAGAGGGA TCTCTTTTCCAGTAA xis 1993099 - 1992830 - | excisionase TERM 2222 1993119 - 1993143 + r 78 -9.9 -3.50326 | opp_overlap 1993121, overlap 1993121 CTTTCCTCAGTAGGA AAGGGCGCAAC GAT GCTGCGCCCTA TTATGGTCGTTTGAT TERM 2223 1993141 - 1993121 - R 100 -14.7 -3.78775 | opp_overlap 1993121 1993119 TTCCTCAGTAGGAAA GGGCGCAAC GAT GCTGCGCCC TATTATGGTCGTTTG TERM 2224 1993121 - 1993141 + r 95 -12.5 -3.31802 | opp_overlap 1993121, overlap 1993119 TTCCTCAGTAGGAAA GGGCGCAAC GAT GCTGCGCCC TATTATGGTCGTTTG YE1801 1993514 - 1993206 - | phage-like protein YE1802 1993870 - 1993532 - | hypothetical protein tnpB 1994700 - 1993951 - | transposase B TERM 2225 1994055 - 1994035 - G 71 -4.7 -4.50976 | TTTCAGATTATAAAA GCTGTCGAT ATA ATCGATAAC ATCAGCGATACCCTG TERM 2226 1994254 - 1994274 + g 83 -8.9 -4.41348 | opp_overlap 1994253 1994256, overlap 1994256 ATCGCTATGGAACAC CACTGACCC TGT GGGTCGGCG TTTATTTACGGCCAG TERM 2227 1994299 - 1994322 + g 85 -10.3 -4.03234 | GGCCAGCCTTAAGGC CCGGACAGT CAAGTC GCTGTCCGG TTTGTCTGAGAAGGC TERM 2228 1994737 - 1994725 - H 86 -9.1 -4.3898 | overlap 1994727 ACTACGGGCATAAAA CACGC TGC GCGTG AGCGACAAGCAGCGG TERM 2229 1994751 - 1994727 - H 72 -7.8 -3.80133 | overlap 1994725 TACGGGCATAAAACA CGCTGCGCGT GAGCG ACAAGCAGCG GCATACCTGTTGGAT TERM 2230 1995992 - 1996027 + G 74 -11.2 -3.08679 | gap 1, opp_overlap 1995991 1995985 1995988 CTCATCAACAACAAC CGGTTGAGGCGTTCACC TTT GGTGAAC-CCTCGGCGG TGTTGGATAAGCGGG TERM 2231 1996245 - 1996260 + G 73 -5.4 -4.60041 | TGCGCTGGATTATTT GGTGTT CGGT AACGCC TTTTTGGAGCTGCGT YE1805 1995934 - 1996935 + | phage portal vertex protein YE1806 1997513 - 1996992 - | hypothetical protein YE1807 1998006 - 1997545 - | hypothetical protein TERM 2232 1997620 - 1997630 + g 77 -4 -5.15969 | CGTATTTTTCCTACT TAGA GCA TCTA TTTTTTCAATTGAAA TERM 2233 1997901 - 1997911 + g 74 -2.6 -5.0133 | overlap 1997905 TCATGATTATTTTGA TATT TTG AATA TTTTTTGGAAAGATA TERM 2234 1998191 - 1998158 - R 77 -8.4 -3.93026 | opp_overlap 1998157 1998163, overlap 1998163 AACATCCTAAGTAAA TTAAAGAGCAATTA TAAAGT TCATTGCTCTTTAA GGTTATCCATCAGAA yenI 2000696 - 1998216 - | methyltransferase-endonuclease TERM 2235 1999144 - 1999164 + g 81 -6.2 -4.94902 | overlap 1999146 AGGGCCTGATCAAGT TTCTCTTG GGCAG CAAGAGGA TTTTTATCATCATTC YE1809 2001138 - 2000971 - | hypothetical protein YE1810 2001434 - 2001697 + | insertion element protein YE1811 2001724 - 2002473 + | transposase for insertion element IS1222 TERM 2236 2002508 - 2002524 + F 70 -2.9 -4.91977 | overlap 2002510 GGGCAGGTCATGTGG TTCGGCA GTG TGCGGGA TTTTGTATTTTAATA TERM 2237 2002601 - 2002611 + F 73 -2.6 -5.16572 | TTGTTTCCAGTGGAC TTAT TGA ATAA TTTTTTCAGTTGAGT TERM 2238 2003246 - 2003263 + F 100 -9.1 -5.76633 | TATATCACGCTTATT GCCCCAT TTCG GTGGGGC TTTTTTTATATCTGA YE1813 2003309 - 2003704 + | putative exported phage-related protein YE1814 2003704 - 2004000 + | hypothetical protein YE1815 2003987 - 2004529 + | hypothetical protein YE1816 2004575 - 2005024 + | putative phage endopeptidase TERM 2239 2005380 - 2005404 + F 100 -10 -5.26119 | opp_overlap 2005366 AGATGGTCACCCCCA CCCTGTGAGC GGTAA GCTGACAGGG TTTTCTTTTTGGAGG TERM 2240 2006043 - 2006029 - g 73 -2.1 -5.15381 | overlap 2006030 AAGAGAGTTAAAAAA CCATC TGGCC GATGA TGAAACAGCACAACG YE1818 2005427 - 2006431 + | transposase for insertion sequence element IS1328 TERM 2241 2006461 - 2006434 - f 100 -11.4 -4.93877 | CTTCAGTAAATAAAA GAGCCAACAGTA AATC TACTGTCAGCTC AATGAGTTACCAAGT TERM 2242 2007026 - 2007012 - g 71 -5 -4.52857 | overlap 2007013 AGTGCGCAGATAAAA CGCTTT GTA AAAGCA CTTGAGGCCAAAGCA YE1819 2006793 - 2007209 + | phage-like protein TERM 2243 2007665 - 2007681 + F 72 -7.3 -3.99229 | GCATTATATCATCAG CCATGTC AGT GATATGG TTATTGTATTAGTAT ail 2007722 - 2008258 + | attachment invasion locus protein TERM 2244 2008326 - 2008371 + F 100 -9.2 -4.59376 | gap 1, overlap 2008332 2008333 CACTTTTCCTGGCGG TTGACATGGCCTGATTTCGGT ACTGC ACCGGACTCAGGCCGT-TTAA TTTTACTTTGATCCT TERM 2245 2008332 - 2008366 + F 100 -12.9 -4.29472 | overlap 2008326 2008333 TCCTGGCGGTTGACA TGGCCTGATTTCGGT ACTGC ACCGGACTCAGGCCG TTTAATTTTACTTTG TERM 2246 2008333 - 2008365 + F 100 -14.2 -3.16056 | overlap 2008332 2008326 CCTGGCGGTTGACAT GGCCTGATTTCGGT ACTGC ACCGGACTCAGGCC GTTTAATTTTACTTT TERM 2247 2008849 - 2008837 - g 85 -2.7 -5.58454 | CTGATATTAAAAAAA TCAAA GAC CTTGA AGATGAGAACCGACG trp1400A 2008650 - 2008937 + | IS1400 transposase A YE1825 2010666 - 2011838 + | putative DNA-binding protein tnpB 2012602 - 2011853 - | transposase B TERM 2248 2011957 - 2011937 - G 71 -4.7 -4.50976 | TTTCAGATTATAAAA GCTGTCGAT ATA ATCGATAAC ATCAGCGATACCCTG TERM 2249 2012156 - 2012176 + g 83 -8.9 -4.41348 | opp_overlap 2012155 2012158, overlap 2012158 ATCGCTATGGAACAC CACTGACCC TGT GGGTCGGCG TTTATTTACGGCCAG TERM 2250 2012201 - 2012224 + g 85 -10.3 -4.03234 | GGCCAGCCTTAAGGC CCGGACAGT CAAGTC GCTGTCCGG TTTGTCTGAGAAGGC TERM 2251 2012639 - 2012627 - R 86 -9.1 -4.3898 | overlap 2012629 ACTACGGGCATAAAA CACGC TGC GCGTG AGCGACAAGCAGCGG TERM 2252 2012653 - 2012629 - R 72 -7.8 -3.80133 | overlap 2012627 TACGGGCATAAAACA CGCTGCGCGT GAGCG ACAAGCAGCG GCATACCTGTTGGAT tnpA 2013024 - 2012692 - | IS1329 transposase A TERM 2253 2013206 - 2013220 + r 100 -7.8 -5.71712 | opp_overlap 2013206 2013205 ATGTAATTAAAGAAG CCTGCG AAT TGCAGG TTTTTTTATATCAAA TERM 2254 2013402 - 2013389 - R 100 -9.5 -5.42259 | TCAGGCGCAAAAAAA CCGCC TCTC GGCGG TTAACGACATACTCA TERM 2255 2013490 - 2013510 + r 76 -10.5 -2.90714 | opp_overlap 2013489, overlap 2013493 CGCACAGCCATAAGC CGAGGGATT TTA AATCCCTTG TGTCTACCGATTTCA TERM 2256 2013493 - 2013507 + r 73 -8.6 -3.5947 | opp_overlap 2013489, overlap 2013490 ACAGCCATAAGCCGA GGGATT TTA AATCCC TTGTGTCTACCGATT TERM 2257 2013703 - 2013719 + r 76 -10.9 -2.62616 | TCGAACTCGCGACCC CGACCTT GGC AAGGTCG TGCTCTACCAACTGA pgsA 2014438 - 2013890 - | phosphatidylglycerophosphate synthetase uvrC 2016329 - 2014497 - | excinuclease ABC subunit C uvrY 2016978 - 2016322 - | response regulator TERM 2258 2017196 - 2017175 - H 82 -4.5 -5.31275 | opp_overlap 2017175 TGTCATGATAAAAAA GAAAAGTTT TTTA AGACTTTTC TTGTCACTATGTATC TERM 2259 2017318 - 2017332 + H 91 -3.6 -5.88476 | overlap 2017308 TGCTATTCTTAATAG TAGGAA TTA TTCTTA TTTTTTATTTATTTT YE1832 2017670 - 2017894 + | hypothetical protein TERM 2260 2017933 - 2017978 + F 70 -3.5 -4.80453 | gap 1 TCCTATATATTCATG CTGCCACGTAGAAAGTTTTT TTCAGTT AAATACTCTCTAT-TGGCAG TTTGTTTTATGATCG glpM 2018006 - 2018344 + | hypothetical protein YE1834 2018629 - 2018375 - | hypothetical protein TERM 2261 2019348 - 2019379 + r 71 -2.3 -5.13722 | opp_overlap 2019345 2019349, overlap 2019345 2019349 TGATATGAAAATTAA ACCATAGGTTGAT TTTCAT ATCAATCAATGGA TTTTATTTTAATCAA YE1835 2019890 - 2019471 - | putative DNA-binding protein YE1836 2020221 - 2020403 + | phage-like protein TERM 2262 2020864 - 2020849 - g 73 -4.6 -4.74706 | GCGAATATCGAAAAA CTTCCC GTCA GGGCAG AAAAAACCAAGGCGT TERM 2263 2021127 - 2021114 - g 70 -8.1 -3.82098 | TATAATCAATCCAAA CGTGC TATT GCACG GCAACAAAAGAAAGA YE1837 2020829 - 2021248 + | phage antitermination protein TERM 2264 2021340 - 2021355 + T 100 -8.2 -5.50313 | opp_overlap 2021340 ACACAGTCAAATAAA CCTCGC TCAG GCGGGG TTTTTTCATTTTATC TERM 2265 2021355 - 2021340 - T 73 -6 -4.48902 | opp_overlap 2021340 ACACAGTCAAATAAA CCTCGC TCAG GCGGGG TTTTTTCATTTTATC YE1838 2021602 - 2021426 - | hypothetical protein YE1839 2021829 - 2022005 + | hypothetical protein YE1840 2022007 - 2022489 + | bacteriophage lysozyme TERM 2266 2022814 - 2022832 + F 100 -6.6 -5.61596 | opp_overlap 2022812 TGGTGATAACCCATG CCGAGGAG CAA TTCCCCGG TTTTTTTGTACAACT TERM 2267 2023319 - 2023331 + G 78 -7.7 -4.4195 | opp_overlap 2023318 TAAGTGGTAAGCCAT TCCTG CCA CAGGA TTTTATGGAGTCTAT YE1842 2022862 - 2023746 + | lipase TERM 2268 2023782 - 2023751 - f 100 -13.1 -3.91488 | opp_overlap 2023743, overlap 2023753 AAGGTCTTTAAATAA TATCACCCCCTCT TTAACC AGAGGGGGTGAAA TAGGTGAGTAATGTG TERM 2269 2023780 - 2023753 - f 100 -15.7 -3.54488 | opp_overlap 2023743, overlap 2023751 GGTCTTTAAATAATA TCACCCCCTCT TTAACC AGAGGGGGTGA AATAGGTGAGTAATG TERM 2270 2025328 - 2025314 - g 90 -7.8 -5.08824 | overlap 2025315 GTTGTAGCTAAAAAA CCGGCT ATT AGCCGA TCAAAACCCGCTGAA TERM 2271 2025327 - 2025315 - g 74 -9.1 -3.64812 | overlap 2025314 TTGTAGCTAAAAAAC CGGCT ATT AGCCG ATCAAAACCCGCTGA YE1843 2024540 - 2025412 + | 23S rRNA pseudouridine synthase F YE1845 2027630 - 2026785 - | putative inner membrane protein TERM 2272 2027539 - 2027519 - G 85 -6.2 -5.02074 | TGACGCCGGAAAAAA TTGCCATC AATGA AATGGCAA CTAAACGGTCAGTAC YE1846 2027865 - 2028122 + | hypothetical protein TERM 2273 2028129 - 2028156 + F 70 -9.2 -2.81471 | opp_overlap 2028124 2028123 CCTGCATAAGTTTGA TTTTGGGCTAGG GTAG CGTGGCCCAAAA TCTAATACACTTCTA TERM 2274 2029093 - 2029109 + G 73 -9.5 -3.27676 | opp_overlap 2029078, overlap 2029091 TGATGATATCGATCA CCAACAA ACC TTGTTGG TCTATTTCAATGGAT YE1847 2028284 - 2029324 + | putative inner membrane protein TERM 2275 2029339 - 2029362 + F 100 -13.2 -3.31144 | opp_overlap 2029325, overlap 2029344 ATTCTATTTTTATAT GGTAACCGCC TCCG GGCGGTTATC TTATCAGAGTAGGAA TERM 2276 2029344 - 2029357 + F 81 -9.5 -3.75378 | opp_overlap 2029325, overlap 2029339 ATTTTTATATGGTAA CCGCC TCCG GGCGG TTATCTTATCAGAGT TERM 2277 2029533 - 2029543 + G 79 -2.4 -5.43866 | GCCATTGTCTTGTAT ACCG ATG CGGA TTTTTTTAGCCCTTA TERM 2278 2029813 - 2029800 - g 73 -8.1 -3.9679 | CAAGATAGACAAGAA CGTGC CAAA GCACG CGAAATCCAAGCCTG YE1848 2029506 - 2030141 + | putative transferase YE1849 2030211 - 2030759 + | putative acetyl transferase TERM 2279 2031369 - 2031353 - g 79 -3.7 -5.24531 | opp_overlap 2031355, overlap 2031355 ATCCTCGATAAAAAA GACTTTC AAC GAAAGTT ATGCCGATCATTCAT TERM 2280 2031367 - 2031355 - g 71 -6.3 -4.25873 | opp_overlap 2031355, overlap 2031353 CCTCGATAAAAAAGA CTTTC AAC GAAAG TTATGCCGATCATTC YE1850 2031267 - 2031500 + | hypothetical protein YE1853 2032223 - 2032612 + | hypothetical protein TERM 2281 2032717 - 2032685 - T 70 -7.7 -3.64441 | opp_overlap 2032682 2032685, overlap 2032681 ATATGAAAGAAGGAA CCGCCACTCATAAGT TTT AGCTATGGGTGACGG ATCTTTGAACCATCA YE1854 2032972 - 2032730 - | hypothetical protein YE1855 2034794 - 2033085 - | hypothetical protein TERM 2282 2033884 - 2033902 + g 71 -3.1 -5.00616 | gap 1 TCTGCCAACGCTTCT TCGC-GGG TTAG CCCAGTGA TTTTTTCAAAGCGAG TERM 2283 2034463 - 2034452 - G 75 -5.8 -4.57073 | opp_overlap 2034452 CATTGTGGTCAAAAA GTGG AATA CCAC TACTTTCTATCAAGA TERM 2284 2035002 - 2034992 - R 79 -6.8 -4.7173 | GAGGATATTGAAAAA TGGG CTT CCCA GATAAAATTAACAAT YE1856 2036027 - 2035017 - | hypothetical protein YE1857 2038499 - 2036058 - | outer membrane usher protein YE1858 2039335 - 2038586 - | putative chaperone protein YE1859 2039939 - 2039382 - | hypothetical protein YE1860 2040507 - 2039950 - | hypothetical protein TERM 2285 2040524 - 2040538 + r 73 -10 -2.97245 | opp_overlap 2040524 2040520, overlap 2040520 CCTGCTACCAACTGA CCGTCA CGT TGACGG TATCGTTATAGGTGC TERM 2286 2040538 - 2040524 - R 70 -10 -2.56596 | opp_overlap 2040520 2040524, overlap 2040520 CCTGCTACCAACTGA CCGTCA CGT TGACGG TATCGTTATAGGTGC YE1861 2041067 - 2040513 - | hypothetical protein TERM 2287 2041121 - 2041098 - R 73 -8.9 -3.47403 | opp_overlap 2041095 2041098 GTAATCTAGAATTAA GTTGCGCCA ATAACG TAGCGCAAC TGATGTTTTCGACAC YE1862 2042801 - 2041377 - | putative membrane transport protein TERM 2288 2042014 - 2042026 + g 77 -2.6 -5.24129 | GCGGTTTGAATTAAG GGGT ATTTC GCCC TTTTTTCTGCCCGAC YE1863 2042930 - 2043850 + | LysR family transcriptional regulator YE1864 2046493 - 2043863 - | hypothetical protein yebS 2047709 - 2046462 - | hypothetical protein TERM 2289 2047970 - 2047959 - g 76 -2.2 -5.23316 | CATTACATGAAAAAA GCAG AATT CTAC GCGGAATTAAAACGT YE1866 2047950 - 2048447 + | hypothetical protein TERM 2290 2048475 - 2048494 + F 86 -12.2 -3.1552 | overlap 2048473 GTGGCAATTGCTGAT GGCGTCAT TATA ATGACGCC TGTTCATGCCTGCGC TERM 2291 2048599 - 2048609 + G 80 -8.2 -4.41348 | AGCCTTTTTGGCTGA GCGG TTC CCGC TTTGTTTCACCGCCG TERM 2292 2048721 - 2048700 - g 78 -10.9 -3.29147 | GGGAAGAGAATTTAA GCAAAACGC AATT GCGTTCTGC GCTGCGTCTCTACAC TERM 2293 2049095 - 2049059 - g 71 -4.9 -4.53777 | overlap 2049091 GCTAATCAAAAACAA GCTCGGCCACCTCGTCC ACA GGCCGAGGAAAACCAGC CACGCCCTGTGCCGG proQ 2048543 - 2049271 + | putative solute/DNA competence effector TERM 2294 2050740 - 2050722 - g 83 -11.8 -3.53811 | opp_overlap 2050711 2050721 2050722 2050739, overlap 2050736 2050737 2050739 CCTACCTTCGGTAAA GGTACTGT ACA ACAGTACC GTTCGTTGAACCGTA TERM 2295 2050722 - 2050740 + G 75 -11.8 -2.60392 | opp_overlap 2050722 2050736 2050737 2050739, overlap 2050711 2050721 2050739 CCTACCTTCGGTAAA GGTACTGT ACA ACAGTACC GTTCGTTGAACCGTA TERM 2296 2051338 - 2051304 - g 80 -2.9 -5.38054 | gap 2, overlap 2051305 2051306 GCTCATAAAGAAAAA GCGCAGCCACAGGTTGA ATC TCAACCGGCAG-TGC-C TGCTGCGACAGCAAC prc 2049291 - 2051366 + | carboxy-terminal protease TERM 2297 2051386 - 2051406 + F 100 -13.3 -6.11019 | opp_overlap 2051386 TGGATGTATGCATAA TCCGGGTTC TTA GAGCCCGGA TTTTTTTTACTTTTT TERM 2298 2051406 - 2051386 - f 81 -11.1 -3.36878 | opp_overlap 2051386 TGGATGTATGCATAA TCCGGGTTC TTA GAGCCCGGA TTTTTTTTACTTTTT TERM 2299 2052129 - 2052143 + G 76 -7.2 -4.48583 | opp_overlap 2052129, overlap 2052118 ATGACCTTAATTCAA GGTATT GTG AATACC TTTGTTATCTTCATT htpX 2051661 - 2052542 + | heat shock protein HtpX TERM 2300 2052583 - 2052566 - T 100 -9.8 -4.75518 | opp_overlap 2052561 GATATAAAAGCAAAA CCCCGC TATCTG GCGGGG TGAGGTTAATGACAA TERM 2301 2052658 - 2052645 - T 70 -8.1 -3.58329 | opp_overlap 2052656, overlap 2052634 TAAAGACGCCGTAAA CCCCT CCCT AGGGG CTCGAGCCGCGCCCT TERM 2302 2052656 - 2052672 + T 70 -9.3 -2.87931 | opp_overlap 2052645 2052634 TAAACCCCTCCCTAG GGGCTCG AGC CGCGCCC TATATGGACGCTCCC TERM 2303 2052921 - 2052970 + T 100 -21.9 -3.13299 | gap 1, overlap 2052926 TATTCACTTTTGTTC TTGAGCCTTATCCGT-GTTTGAGA TTA TCTCAAACCACGGATAAGGTTCGA TATTCCGTATGCTGA TERM 2304 2052926 - 2052965 + T 100 -20.4 -3.19789 | gap 1, overlap 2052921 ACTTTTGTTCTTGAG CCTTATCCGT-GTTTGAGA TTA TCTCAAACCACGGATAAGG TTCGATATTCCGTAT YE1870 2053968 - 2052949 - | putative transposase for IS1667 TERM 2305 2053324 - 2053349 + g 80 -7.5 -4.57569 | opp_overlap 2053316 2053329, overlap 2053329 CACACCAGGGACTTT CAAGACCCGCT GGCA GGCGGGTTGTG TTTTTGCCCAACTGC TERM 2306 2053329 - 2053344 + g 76 -8.2 -4.07746 | opp_overlap 2053316 2053329, overlap 2053324 CAGGGACTTTCAAGA CCCGCT GGCA GGCGGG TTGTGTTTTTGCCCA TERM 2307 2054127 - 2054144 + r 100 -10.5 -4.63479 | TTGTCAGCAGTCTGA CCCCGCT ATCT GGCGGGG TTTTGCTTTGTGCTA YE1871 2054585 - 2054157 - | putative lipoprotein YE1872 2054731 - 2054582 - | hypothetical protein YE1873 2055374 - 2054736 - | hypothetical protein TERM 2308 2055745 - 2055755 + G 71 -6.8 -4.183 | opp_overlap 2055740 AGACTGAAAACAATG GGGT AAA ACCC TTTGTTCAAGCTTAC TERM 2309 2055876 - 2055892 + G 85 -10.1 -4.2008 | TCTGTGCCCGCCTCA GCGGTGA CTC TCGCCGC TTTGTTAAGATATCT YE1874 2055684 - 2056085 + | putative DNA-binding protein YE1875 2057477 - 2056110 - | putative transport protein TERM 2310 2056535 - 2056568 + g 88 -13.2 -3.14132 | opp_overlap 2056553 CCACCATGGTGGCGA GTGGCCACGGGGTT AATAGC AACCCGGTGGCTAC TTCATCACGACCCAA TERM 2311 2056755 - 2056743 - G 81 -3.3 -5.38958 | overlap 2056752 2056754 ACGCACAAAGAAAAA GCCGA TAA CCAGC AGTGCTATCACTTCA ogl 2057802 - 2058968 + | oligogalacturonate lyase TERM 2312 2058981 - 2059007 + F 100 -12.4 -3.88498 | overlap 2058982 2058984 TAGTTGAATTTTGCA CTAGCCTCTTTC ATG GAAAGAGGCTAA TTTGCTGTCTGCAAG TERM 2313 2058982 - 2059006 + F 100 -15.9 -2.92777 | overlap 2058981 2058984 AGTTGAATTTTGCAC TAGCCTCTTTC ATG GAAAGAGGCTA ATTTGCTGTCTGCAA TERM 2314 2058984 - 2059004 + F 100 -14.1 -3.01329 | overlap 2058982 2058981 TTGAATTTTGCACTA GCCTCTTTC ATG GAAAGAGGC TAATTTGCTGTCTGC kdgR 2059155 - 2059946 + | IclR family transcriptional regulator TERM 2315 2060037 - 2060058 + F 100 -11.6 -5.5112 | opp_overlap 2060037 CCTTCCCATCCCAAA CGGCTCCT CTTATC AGGAGCCG TTTTTTATTGATGGA TERM 2316 2060058 - 2060037 - f 90 -11.6 -3.59979 | opp_overlap 2060037 CCTTCCCATCCCAAA CGGCTCCT CTTATC AGGAGCCG TTTTTTATTGATGGA b0867 2060222 - 2061073 + | N-acetylmuramoyl-L-alanine amidase TERM 2317 2061135 - 2061116 - T 100 -6.4 -5.63236 | ATTTAAAAACAAAAA GCTAGTCA CGGA TGACTGGC TCTAAACGCTGACAA TERM 2318 2061256 - 2061275 + T 100 -12.2 -4.10161 | opp_overlap 2061254 CGTATTATTAAATCT GCCAGTCA CGGA TGACTGGC TTTTAAGGACTCATC gltP 2062696 - 2061299 - | putative transport protein YE1880 2063457 - 2062909 - | hypothetical protein TERM 2319 2063022 - 2062992 - G 74 -4 -4.89966 | opp_overlap 2062996, overlap 2062996 AGACGGAAAAACAAA CTAATAGAACACAT AAT ACGCGTTCTAATTG ATTACCTTTTTGTGG TERM 2320 2063018 - 2062996 - G 70 -7.8 -3.86874 | opp_overlap 2062996, overlap 2062992 GGAAAAACAAACTAA TAGAACACAT AAT ACGCGTTCTA ATTGATTACCTTTTT TERM 2321 2063717 - 2063686 - R 100 -13.2 -5.14477 | gap 1 GACAGAGCGAAAAAA GGGGAAAAG-TGACC GGG AGTCAGCTTTTCCCC AAAGTAATACGGGTA YE1881 2064513 - 2063815 - | hypothetical protein TERM 2322 2064623 - 2064611 - R 72 -6.3 -4.25458 | opp_overlap 2064610 2064611 AATTCCACCAACAAA GAAAC AAT GTTTC ATTTATTGTGAATGC TERM 2323 2064786 - 2064759 - R 95 -7.7 -5.18371 | opp_overlap 2064762, overlap 2064762 GGCTATAAAACAAAA GAACCCCGCCA AATTAA TGGCAGGGTTT AATAGATACTTAAGT TERM 2324 2064762 - 2064783 + r 70 -7.2 -3.7791 | opp_overlap 2064762 2064759 TATAAAACAAAAGAA CCCCGCCA AATTAA TGGCAGGG TTTAATAGATACTTA TERM 2325 2064783 - 2064762 - R 100 -9.4 -4.66746 | opp_overlap 2064762, overlap 2064759 TATAAAACAAAAGAA CCCCGCCA AATTAA TGGCAGGG TTTAATAGATACTTA YE1882 2066111 - 2064819 - | putative sugar-binding protein TERM 2326 2065191 - 2065215 + g 74 -9.4 -3.7574 | overlap 2065190 AATGGAAAGCATCTG TGCTGGTTTA AAGAA TAAACCGGCA TCTTTTGCTCCTGGC TERM 2327 2065572 - 2065583 + g 76 -2.2 -5.30616 | opp_overlap 2065562 TACCACTGGATAATA TTGG TCAC CCAG TTTTTCTTTAAATAC YE1883 2067254 - 2066127 - | putative sugar ABC transporter YE1884 2068107 - 2067268 - | putative sugar ABC transporter (permease) YE1885 2069068 - 2068178 - | putative ABC sugar transporter (permease) kdgC 2070776 - 2069109 - | exopolygalacturonate lyase TERM 2328 2070013 - 2069987 - G 85 -10.2 -3.97636 | AGCTGAATTGATAAA CCGGTAATCCTG TTT CAGGATTACGAG CCAAAACGTATTGAC TERM 2329 2070808 - 2070826 + r 71 -8.9 -3.35679 | TAGAAATGTCAGGTC GGAACTG GTTTA CAGTTCC TTATAAATAGAAACA TERM 2330 2071025 - 2071006 - R 100 -12.2 -5.57396 | ATAAGTAATAAAAAA GGCACAAC TGAT GTTGTGCC TCAATAGAGTTTTGA kduD1 2071865 - 2071104 - | 2-deoxy-D-gluconate 3-dehydrogenase TERM 2331 2071939 - 2071925 - R 88 -9.2 -4.38154 | opp_overlap 2071925 2071924, overlap 2071913 ATATTGGGGAGAAAA CCGCCC AAA GGACGG CTTTGGTAGGGTGAT kduI 2072813 - 2071977 - | 5-keto-4-deoxyuronate isomerase kdgF 2073051 - 2073383 + | pectin degradation protein TERM 2332 2073394 - 2073420 + T 86 -8.7 -4.24342 | gap 1, opp_overlap 2073389 TGTAAAACATGTTCA GGCGGCTGG-GT ATCA ACGCCAACCGCC TTTATTAATACAAAA YE1890 2074159 - 2073494 - | 2-deoxyglucose-6-phosphatase yfeE 2074409 - 2074963 + | putative yfeABCD locus regulator TERM 2333 2075022 - 2075005 - f 70 -5.5 -4.51174 | GCATCATAATGAAAA GGCCC ATCATTTA GGGCC TCAGACTGCTGACAA TERM 2334 2075111 - 2075085 - f 72 -7.2 -3.97088 | gap 1, overlap 2075086 TGGCAGAAGAGTAAA GCGTCCGCGCC AGGGAG GGCGCGG-CTC GAGCCCCCAGGGAGG TERM 2335 2075190 - 2075207 + F 73 -5.5 -4.65458 | TTGTCATTAACCTCA GGCCC ATCATTTA GGGCC TTTGTTATTTCTCTA YE1892 2075357 - 2076247 + | LysR family transcriptional regulator YE1893 2077725 - 2076244 - | putative 4-hydroxybutyrate coenzyme A transferase TERM 2336 2076809 - 2076825 + g 73 -2.2 -5.07275 | ATGGTTAAGCTCGAG GCACTG ACACC CAGTAC TTTTTCTGTCTCTAA TERM 2337 2077424 - 2077442 + g 73 -2.4 -5.0133 | opp_overlap 2077419 2077424 2077425, overlap 2077419 2077425 2077428 TGCAAATCAACAAAG CTAACCGA GCC TTGGTTAA TTTTTTCCCGCAATA YE1894 2078536 - 2077751 - | methylmalonyl-CoA decarboxylase YE1894A 2079545 - 2078550 - | arginine/ornithine transport system ATPase YE1895 2081682 - 2079538 - | methylmalonyl-CoA mutase TERM 2338 2081912 - 2081947 + r 100 -14.8 -3.01712 | opp_overlap 2081913, overlap 2081915 TTGCTGGCATAAAAA ACACCCTGTGAGTTAG ATAT CCAACTCACAGGGTGC TATTGACGGACAACG TERM 2339 2081946 - 2081913 - R 100 -20.5 -5.24129 | opp_overlap 2081912 2081915 TGCTGGCATAAAAAA CACCCTGTGAGTTAG ATAT CCAACTCACAGGGTG CTATTGACGGACAAC TERM 2340 2081915 - 2081944 + r 100 -15.1 -2.73875 | opp_overlap 2081913, overlap 2081912 CTGGCATAAAAAACA CCCTGTGAGTTAG ATAT CCAACTCACAGGG TGCTATTGACGGACA YE1896 2082838 - 2081969 - | hypothetical protein TERM 2341 2082737 - 2082715 - G 73 -3.4 -4.85599 | CGCATTTGACAAAAA CCTCAGTT TCGCCAT AGCTGAGG CGCCAGGCTTGATGA TERM 2342 2082966 - 2082948 - R 95 -13.2 -3.14132 | GCTCTTGGGGATTAA TGAGCCTC TGT GAGGCTCA CCCGATGGGCTAGCA YE1897 2084141 - 2083254 - | chelated iron transport system membrane protein YE1898 2085022 - 2084138 - | chelated iron transport system membrane protein YE1899 2085912 - 2085022 - | ATP-binding transport protein TERM 2343 2085297 - 2085280 - G 77 -6.3 -4.49981 | gap 1, opp_overlap 2085280 2085280 CACATGATCACAAAA CTCTGGCA CAC TGCC-GAG GTTGTGGGTCGAAAC TERM 2344 2085437 - 2085453 + g 76 -2.2 -5.24129 | TGCTGGGCCAGTGCT CGCG CCAGAAACA CGCG TTTTTTCTGCCCGCC YE1900 2086877 - 2085909 - | periplasmic-binding protein TERM 2345 2087106 - 2087119 + G 80 -6.7 -4.71426 | GAATCCAAAAGTCGG TTGCC TAAT GGCAA TTTTATTGCTGGCAG TERM 2346 2087201 - 2087188 - g 70 -2.3 -5.00616 | opp_overlap 2087188 2087189, overlap 2087189 GGGTGGCTCAAAAAA GCACC TGAG GGTGG TTTCCTGAATGCACC YE1901 2087089 - 2087751 + | putative membrane-bound lytic murein transglycosylase marC 2088645 - 2087962 - | multiple drug resistance protein MarC TERM 2347 2088146 - 2088132 - G 85 -10 -4.43189 | ACGAACCCCATAAAA TCAGCG AAA CGCTGA GGAAAATCAGTACCG YE1904 2089053 - 2089337 + | hypothetical protein YE1905 2089426 - 2089764 + | hypothetical protein YE1906 2089809 - 2090045 + | hypothetical protein TERM 2348 2090026 - 2090065 + F 72 -7.2 -4.05677 | AAGCTGCAATTGATC TGGCCAAAATGCATTCAT GATA GTGAGTGTATCTCGGCCA TTATTTCCCTTGTTT TERM 2349 2090503 - 2090476 - f 100 -17.8 -5.26119 | GTGCTAAAAATAAAA CGCCCCGATTGC GTAA ACAATCGGGGCG GCGTTCCAGTAACCA TERM 2350 2091375 - 2091387 + G 73 -3.3 -4.89852 | opp_overlap 2091375 CCTATATGGATGATA TCGCC TTT GCCGA TTTTTCTGCCTGTGG YE1909 2090816 - 2091529 + | putative inner membrane protein YE1910 2091861 - 2091649 - | hypothetical protein TERM 2351 2093880 - 2093868 - g 93 -7.7 -5.18357 | CAAGTGACCAAAAAA CTGCA AGA TGCAG GAATTAGGGCAAAAG thrS 2092185 - 2094113 + | threonyl-tRNA synthetase infC 2094117 - 2094668 + | translation initiation factor IF-3 rpmI 2094765 - 2094962 + | 50S ribosomal protein L35 rplT 2095000 - 2095356 + | 50S ribosomal protein L20 TERM 2352 2095387 - 2095369 - f 78 -10.3 -3.2496 | opp_overlap 2095369, overlap 2095364 TAAGTCAGAATTGAA GAGGGAG CTTGT CTCCCTC TTTTAATCTTTAGTT TERM 2353 2095369 - 2095387 + F 100 -10.3 -4.52266 | opp_overlap 2095369 2095364 TAAGTCAGAATTGAA GAGGGAG CTTGT CTCCCTC TTTTAATCTTTAGTT TERM 2354 2095520 - 2095537 + F 100 -8.4 -5.95286 | AAAAATAGCGCCTAA GCCTCC CATCGT GGAGGC TTTTTTGTTTTTGCT TERM 2355 2095949 - 2095926 - g 87 -6.8 -5.09895 | overlap 2095927 TATCTAGGCAAAAAA GGTCATTTGA CCCT TCAAATGACA TCGCTGCGTGAACTA TERM 2356 2095948 - 2095927 - g 79 -10.3 -3.65214 | overlap 2095926 ATCTAGGCAAAAAAG GTCATTTGA CCCT TCAAATGAC ATCGCTGCGTGAACT TERM 2357 2095992 - 2095977 - g 73 -8.2 -3.85864 | CTACCAGCAGAAGAA CGCCCG GCAG CAGGCG CAGTCATTAATCAGG pheS 2095821 - 2096804 + | phenylalanyl-tRNA synthetase subunit alpha TERM 2358 2097888 - 2097908 + G 76 -11.1 -3.21747 | TGCACACCGATGCCT CCCATCGCT ATG AGCGAGGGG TTGATCCTGAACTGC pheT 2096819 - 2099206 + | phenylalanyl-tRNA synthetase subunit beta ihfA 2099211 - 2099507 + | integration host factor subunit alpha TERM 2359 2099546 - 2099521 - f 91 -11.9 -3.53761 | opp_overlap 2099526, overlap 2099526 GAATTCTTTCCGAAA CAAAAGGCCGC GCAA GCGGCCTTTTT CTTTATCTTTAACTT TERM 2360 2099526 - 2099541 + F 100 -11.8 -5.48623 | opp_overlap 2099526 2099521 CTTTCCGAAACAAAA GGCCGC GCAA GCGGCC TTTTTCTTTATCTTT TERM 2361 2099541 - 2099526 - f 100 -11.8 -4.86731 | opp_overlap 2099526, overlap 2099521 CTTTCCGAAACAAAA GGCCGC GCAA GCGGCC TTTTTCTTTATCTTT TERM 2362 2099902 - 2099892 - g 75 -5.4 -4.8048 | overlap 2099901 CGCTGATATCAAAAA GATC AAA GATC TAGAAGACGAGAATC trp1400A 2099704 - 2099994 + | IS1400 transposase A TERM 2363 2100762 - 2100735 - T 73 -8.5 -3.71174 | AATAAACAGCGCAAA CAGACGACGTT TAAGGC AACATCGCCTG TTAAAAGTAGGGATT YE1921 2101721 - 2100789 - | putative transposase TERM 2364 2101402 - 2101368 - G 70 -7.9 -3.9093 | gap 1, opp_overlap 2101379, overlap 2101370 2101371 GCCATGATAGAACAA CATGGGAATGACCAGC GGCA ACTGGTCGTTCCC-CG CTTCCAAGTGGCTCT TERM 2365 2101401 - 2101370 - G 71 -9.4 -3.53945 | opp_overlap 2101379, overlap 2101368 2101371 CATGATAGAACAACA TGGGAATGACCAGC GGCA ACTGGTCGTTCCCC GCTTCCAAGTGGCTC TERM 2366 2101400 - 2101371 - G 81 -12.9 -2.71644 | opp_overlap 2101379, overlap 2101370 2101368 ATGATAGAACAACAT GGGAATGACCAGC GGCA ACTGGTCGTTCCC CGCTTCCAAGTGGCT TERM 2367 2101966 - 2101948 - H 71 -8.2 -3.44229 | ACTGTATTAGTATAA TATTGCAC AGC GCGCAATA ACGCAGGGAAAGAGC YE1922 2101983 - 2102270 + | putative proteic toxin protein YE1923 2102270 - 2102584 + | antidote protein TERM 2368 2102724 - 2102697 - T 73 -8.5 -3.71174 | AATAAACAGCGTAAA CAGACGACGTT TAAGGC AACATCGCCTG TTAAAAGTAGGGATT YE1924 2103647 - 2102751 - | putative transposase TERM 2369 2103328 - 2103294 - G 70 -7.9 -3.9093 | gap 1, opp_overlap 2103305, overlap 2103296 2103297 GCCATGATAGAACAA CATGGGAATGACCAGC GGCA ACTGGTCGTTCCC-CG CTTCAAGGTGGCTCT TERM 2370 2103327 - 2103296 - G 71 -9.4 -3.53945 | opp_overlap 2103305, overlap 2103294 2103297 CATGATAGAACAACA TGGGAATGACCAGC GGCA ACTGGTCGTTCCCC GCTTCAAGGTGGCTC TERM 2371 2103326 - 2103297 - G 81 -12.9 -2.71644 | opp_overlap 2103305, overlap 2103296 2103294 ATGATAGAACAACAT GGGAATGACCAGC GGCA ACTGGTCGTTCCC CGCTTCAAGGTGGCT TERM 2372 2104424 - 2104466 + r 100 -12.9 -4.29227 | opp_overlap 2104422 2104421, overlap 2104458 TCAATTAAGAGATGT TTATACCGCTTCCGCTA AGGGCAATA TAGCGGGAGCGGTAAAA TTTATTGCTCGTTCA YE1926 2104788 - 2104468 - | hypothetical protein TERM 2373 2105015 - 2105045 + H 100 -12.6 -3.65986 | overlap 2105010 AATGTTGTGGTTAGA TGCCTCGTTGTGTT CCA AGCACATCGGGGCA TTGTCATTTATGGTA YE1927 2105114 - 2105293 + | hypothetical protein YE1928 2105365 - 2105625 + | DinJ-like protein YE1929 2105632 - 2105910 + | hypothetical protein TERM 2374 2105965 - 2105949 - T 70 -5.1 -4.50487 | ACAAACATAAAATAA GCTGTCA TTG CGACAAC TCCGGCCAGTCAATA YE1930 2106567 - 2105953 - | phage tail fiber assembly protein TERM 2375 2106754 - 2106727 - R 71 -8.4 -3.53444 | TCAGTTTTCGCGAAA GCGCCGCTGAAA TTAC TTTCAGGTGCGC TGCCCATGCTCTCTG YE1931 2107629 - 2106745 - | phage tail fiber protein TERM 2376 2107704 - 2107694 - R 100 -8.2 -6.19302 | AGACAAGAAAAAAAA CCGC ATT GCGG GGTTCGAGGTTAATG TERM 2377 2107875 - 2107861 - R 100 -12.8 -3.58343 | opp_overlap 2107846 GTCAGCAGTCTGAAA CCCCGC ATT GCGGGG CTCCATACACGTGGC TERM 2378 2108426 - 2108442 + r 76 -10.8 -2.71263 | opp_overlap 2108426 GAGTCAAACAAAAAA GCCCGC ACACA GCGGGC TGATTGAAAACGGTT TERM 2379 2108442 - 2108426 - R 100 -10.8 -5.65927 | opp_overlap 2108426 GAGTCAAACAAAAAA GCCCGC ACACA GCGGGC TGATTGAAAACGGTT putA 2112484 - 2108495 - | trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase TERM 2380 2112052 - 2112063 + g 76 -2.2 -5.26875 | gap 1, overlap 2112052 GCACGATACCGGCCC G-GCC ATT GGCAC TTTTTTGATTACGCA putP 2113011 - 2114495 + | proline permease tpn1330 2115781 - 2114588 - | transposase for IS1330 TERM 2381 2114698 - 2114665 - G 74 -11.1 -3.02144 | opp_overlap 2114673 2114676 CTATTCGTCGCAATA TTAGCGGAGAGTGTC TTAA GACATTCTCTGCTAA CGTCAGATAAGATAT YE1936 2116302 - 2115973 - | hypothetical protein YE1937 2117373 - 2116306 - | hypothetical protein TERM 2382 2117126 - 2117148 + g 73 -5.6 -4.55887 | overlap 2117128 AGCATGACGATATCG CCGGAAAAGA CCA TTTTTTCCAG TTTGTCTTTTTCCCG YE1938 2118101 - 2118961 + | hypothetical protein TERM 2383 2119467 - 2119447 - g 71 -4.7 -4.56914 | overlap 2119448 2119449 TGACCCAAACCAAAA CCTTCACCG ATG CAGTGAAAA AAGGCGATTTGGCAT YE1939 2118978 - 2120108 + | hypothetical protein TERM 2384 2120150 - 2120130 - f 100 -10.3 -4.76123 | overlap 2120131 AAATGAGCAAGAAAA CCGGCCCGC AAC ACGGGCCGT ATCAGCAAGATAACG TERM 2385 2120149 - 2120131 - f 100 -13.8 -3.44047 | overlap 2120130 AATGAGCAAGAAAAC CGGCCCGC AAC ACGGGCCG TATCAGCAAGATAAC YE1940 2120360 - 2121415 + | hypothetical protein TERM 2386 2121440 - 2121459 + T 100 -10.7 -5.45652 | opp_overlap 2121437 2121440 AAAAATAGCAATTGA GCACCGC TGTTGC GCGGTGC TTTTTTATTACGGGT TERM 2387 2121459 - 2121440 - T 76 -10.7 -2.63644 | opp_overlap 2121440, overlap 2121437 AAAAATAGCAATTGA GCACCGC TGTTGC GCGGTGC TTTTTTATTACGGGT wrbA 2122073 - 2121474 - | TrpR binding protein WrbA YE1942 2122725 - 2122243 - | putative DNA-binding protein TERM 2388 2124052 - 2124039 - g 73 -2.3 -5.055 | overlap 2124051 TCAAGGGCTAAAAAA GCAGT GGCA ACAGC CCATTTATGCGCTGG YE1943 2123059 - 2124237 + | hypothetical protein YE1944 2125778 - 2124441 - | putative membrane permease hpaC 2126396 - 2125848 - | 4-hydroxyphenylacetate 3-monooxygenase coupling protein YE1946 2127037 - 2126447 - | hypothetical protein TERM 2389 2126491 - 2126481 - G 71 -8.2 -3.66178 | opp_overlap 2126480 2126481 TCGTCGAACGCCAAA CGCG GTG CGCG TTCATACAATTTATT YE1947 2127885 - 2127049 - | putative hydrolase TERM 2390 2127818 - 2127805 - G 81 -9.5 -4.07568 | overlap 2127790 CTGGGGCTGCCAAAA GCGGC CACT GCCGC CCAGTCCCGCAGACA YE1948 2128307 - 2127918 - | hypothetical protein YE1949 2129046 - 2128354 - | putative isochorismatase TERM 2391 2128868 - 2128887 + g 73 -8.5 -3.95424 | opp_overlap 2128859 TGAATACCGGCGGCC CGCGCGG CAGTGA TCGCGCG TTTGATATTGGTGAT ssuD 2130245 - 2129142 - | alkanesulfonate monooxygenase YE1951 2130561 - 2131229 + | TetR family transcriptional regulator TERM 2392 2131275 - 2131251 - T 100 -12.9 -4.74285 | overlap 2131252 AGTGAGAAGAGAAAA GGGCGTCAGAA GCG TTCTGACGCCG GATAACAAGTATTAG TERM 2393 2131274 - 2131252 - T 100 -16.4 -3.43486 | overlap 2131251 GTGAGAAGAGAAAAG GGCGTCAGAA GCG TTCTGACGCC GGATAACAAGTATTA cycA 2132905 - 2131475 - | D-alanine/D-serine/glycine permease TERM 2394 2133447 - 2133468 + r 74 -4.3 -5.0133 | opp_overlap 2133450, overlap 2133450 TATTTTGACGCTAAA AAACCCGCG AGTT CGCAGGTTA TTTTTTAGCCAAATA TERM 2395 2133465 - 2133450 - R 100 -8.2 -5.0538 | opp_overlap 2133447 2133450 TTTGACGCTAAAAAA CCCGCG AGTT CGCAGG TTATTTTTTAGCCAA TERM 2396 2133450 - 2133465 + r 75 -6 -4.61482 | opp_overlap 2133450, overlap 2133447 TTTGACGCTAAAAAA CCCGCG AGTT CGCAGG TTATTTTTTAGCCAA YE1955 2135071 - 2134685 - | hypothetical protein TERM 2397 2135572 - 2135590 + r 81 -4.4 -5.36965 | TCGTGTCGTGTTGTC GTGACGGC ATT GCCCACAC TTTTTTATGCTCTTC YE1956 2136328 - 2135627 - | LuxR family transcriptional regulatory protein TERM 2398 2135954 - 2135965 + g 93 -3 -5.98781 | opp_overlap 2135954, overlap 2135951 TGTTACATGAAATAT TGTA CCGA TACA TTTTTTTTCGTTATC YE1957 2137696 - 2136413 - | putative purine and pyrimidine permease TERM 2399 2138454 - 2138438 - g 73 -2.1 -5.011 | opp_overlap 2138441 2138448, overlap 2138441 ATGTAAATAATAAAA CTATCGC CCA GCGGTTG TCGCTCTCTGAGCAG YE1958 2137909 - 2138673 + | LuxR family transcriptional regulatory protein YE1959 2139644 - 2138910 - | hypothetical protein YE1960 2140048 - 2140545 + | hypothetical protein TERM 2400 2140598 - 2140550 - T 74 -6.9 -4.31835 | opp_overlap 2140550, overlap 2140551 AAGGGCGATAAGAAA GTGTTGTATCAGCTAACAGTC GAGGACT GACTGCTAGCTGATATAAAAG TGTAATAAGATTTTT TERM 2401 2140597 - 2140551 - T 77 -10.4 -3.18378 | opp_overlap 2140550, overlap 2140550 AGGGCGATAAGAAAG TGTTGTATCAGCTAACAGTC GAGGACT GACTGCTAGCTGATATAAAA GTGTAATAAGATTTT YE1961 2140956 - 2140627 - | hypothetical protein amyA 2141101 - 2142600 + | cytoplasmic alpha-amylase YE1963 2143127 - 2142879 - | exported protein TERM 2402 2145112 - 2145095 - g 86 -7.7 -4.86033 | overlap 2145105 AAAGCCGCAGAAAAA GGGCTTA AAAC CAAGCCC TGGGTGAAAACGTCA TERM 2403 2145377 - 2145389 + G 71 -9.1 -3.47403 | opp_overlap 2145360, overlap 2145360 AACTGGCTGGCTTCG CCACC GCT GGTGG TTGCTTATGCCTTGG acn 2143724 - 2146396 + | aconitate hydratase TERM 2404 2146462 - 2146447 - T 70 -7.5 -3.79419 | overlap 2146445 2146448 TTGGGGCATAAAAGA GGGGG GACTAG CCCCC TGAGGTTAATGACAA TERM 2405 2146593 - 2146614 + T 100 -12.3 -3.44848 | overlap 2146596 ACTTTGTCAGCCGTC TGAGGGGGG CTAG CCCCCCTTA TATTTGATAAGCGGC TERM 2406 2146596 - 2146611 + T 100 -11.8 -3.86252 | overlap 2146593 TTGTCAGCCGTCTGA GGGGGG CTAG CCCCCC TTATATTTGATAAGC ribA 2147233 - 2146643 - | GTP cyclohydrolase II pgpB 2147575 - 2148336 + | phosphatidylglycerophosphatase B YE1967 2148532 - 2148843 + | hypothetical protein YE1968 2148850 - 2150019 + | hypothetical protein YE1969 2150366 - 2150076 - | hypothetical protein YE1970 2151032 - 2150571 - | putative DNA-binding protein TERM 2407 2151082 - 2151096 + H 100 -10 -4.75174 | CTTAAACTCCAGCCT CGTTCG CGG CGAACG TTTTTCAGTTGGCTG TERM 2408 2151139 - 2151157 + H 71 -3 -5.06414 | overlap 2151140 GCGAGTTCTTTCATC TTGACTCC TGT GGAGGCAC TTTTTATTGAACACA TERM 2409 2151365 - 2151403 + G 70 -9.6 -3.23708 | overlap 2151364 CGGTTATCGCCGGCT TTGTCGCTGTCCTGGT CGGCTAT ACCAGTTCAGCGGCAA TAATTTTTCAGGCAG YE1971 2151310 - 2152512 + | membrane transporter TERM 2410 2152549 - 2152577 + T 91 -10.3 -4.2074 | opp_overlap 2152544 CAGAATATTACTATT GGGGAAAAGTGCT GAA ACCACCTTTCCCC TTTGTCTCTTAGCGG YE1972 2152846 - 2152586 - | hypothetical protein pyrF 2153197 - 2153937 + | orotidine 5'-phosphate decarboxylase YE1974 2153934 - 2154272 + | translation initiation factor Sui1 osmB 2154750 - 2154538 - | lipoprotein araD 2155187 - 2155882 + | L-ribulose-5-phosphate 4-epimerase TERM 2411 2155902 - 2155923 + T 70 -5.1 -4.57569 | TATGTTTAGCCGCCG CCCGTGT TTAGTCCT GCACGGG TTTTTCCAACCATAA YE1977 2156157 - 2155909 - | hypothetical protein YE1978 2156949 - 2156203 - | DeoR family transcriptional regulator TERM 2412 2156761 - 2156744 - G 77 -6.3 -4.65895 | gap 1, overlap 2156746 TGCTTCACGGAAAAA TG-GCGCA TCA TGCGCACA TCAATATCATCACTT mipB 2157145 - 2157810 + | fructose-6-phosphate aldolase TERM 2413 2157867 - 2157843 - T 100 -12.2 -6.04378 | AAAGCATAAAAAAAA CGCCCGCTTA GCTAT TAAACGGGCG TTACGGTGTCACTTG YE1980 2158378 - 2158046 - | hypothetical protein cstA 2160437 - 2158371 - | putative carbon starvation protein A TERM 2414 2160126 - 2160102 - G 74 -9.3 -3.62775 | opp_overlap 2160093, overlap 2160124 AGTACCGGGTAAGAA GCCCATTTGGG CGG CCAAAATAGGC CCAACTAGCGGCCCG TERM 2415 2160674 - 2160701 + r 82 -10.6 -3.68244 | gap 1, opp_overlap 2160674 TCGGGGCATAAAAAA GCCGTGG-GGTGT TGT GCATCACCACGGC TTTACCCTTCATACT TERM 2416 2160701 - 2160674 - R 95 -7.7 -5.24129 | gap 1, opp_overlap 2160674 TCGGGGCATAAAAAA GCCGTGG-GGTG TTGTG CATCACCACGGC TTTACCCTTCATACT rnb 2162787 - 2160853 - | exoribonuclease II TERM 2417 2161038 - 2161027 - G 73 -7.2 -4.15044 | opp_overlap 2161026 2161027 GGGCGCGGGAATAAA GGCG ACTG CGCC GTTATCCAGTAAGCG TERM 2418 2162555 - 2162545 - G 73 -3.2 -4.86033 | overlap 2162547 AAAGCGGGATAAAAA TGGC TCA ACCA GGGTTTCCGGCTCAG YE1983 2165303 - 2162982 - | putative oxidoreductase TERM 2419 2163633 - 2163617 - G 83 -7.3 -4.72272 | GCTGCTGAGCAAAAA CAGCATT GGC AATGCCG CAGACAATGGCTGTT TERM 2420 2164447 - 2164435 - G 71 -10.5 -2.79312 | AAAGCTTTCACCATA CCGCG AAC CGCGG CCATATCACCGCCAA TERM 2421 2164678 - 2164667 - G 85 -5.8 -5.0916 | GCCCGAAGACAAAAA TGGC ATCA GCCA GCTCGAAATCCTGCA TERM 2422 2165311 - 2165321 + H 100 -4.6 -5.95539 | opp_overlap 2165311 AATTTCATGATAATA CGCC GCA GGTG TTTTTTTGTTTCAAG TERM 2423 2165532 - 2165522 - H 70 -2.6 -4.9448 | opp_overlap 2165509 2165504 2165522, overlap 2165517 ATTTATGAAATAAAA TTAT TTA ATAA TTATATTAATAAATG TERM 2424 2166832 - 2166871 + G 77 -6.6 -4.56358 | gap 1, overlap 2166834 2166845 TCAGTGATATTGGCA TTCGAATGGTTGA-TGCCG AAT CGGCGCTTAATCATTTGGA TTTTATGTGGCTATC YE1984 2165838 - 2167073 + | hypothetical protein YE1985 2167117 - 2168151 + | hypothetical protein TERM 2425 2168203 - 2168213 + T 75 -8.2 -3.87815 | CCTGACCTGGACGTT GCGC TAA GCGC TTTGTCAAAATAGAA YE1986 2169385 - 2168315 - | hypothetical protein TERM 2426 2169135 - 2169164 + g 73 -7.9 -4.08767 | TTCTGCTGTTGTATA TCTGTCTTCTTAG ATAG CGGAGAGGACAGA TTTTGAGACACTGGA nth 2170166 - 2169525 - | endonuclease III YE1988 2170864 - 2170163 - | SoxR-reducing system protein RsxE YE1989 2171490 - 2170861 - | electron transport complex protein RnfG rnfD 2172555 - 2171500 - | electron transport complex protein RnfD TERM 2427 2172512 - 2172492 - G 73 -7.5 -4.19746 | overlap 2172481 TGCAGGCTAAAATAA CCAGCAGCA TAA TACTGCGGG TGCTACGTTGATTAT TERM 2428 2173492 - 2173477 - g 80 -9 -4.14397 | opp_overlap 2173489 ACGCCAGAAATCAAA CGGGTA TCTT TACCCG CACAAGAGCTGGTCG YE1991 2173084 - 2173971 + | AraC family transcriptional regulator TERM 2429 2173965 - 2174004 + T 72 -9.2 -3.09635 | overlap 2173968 TTACCTTATGTCGGT GAACTGACGCTCAACTGC GACG GCAAAAGCGCGTCAGTTC TTACCTAATCGGGAT TERM 2430 2174028 - 2174044 + T 80 -3.5 -5.2696 | overlap 2174030 TCGGGATTAACGGCT GAAGCGC TTT GCGCAGC TTTTTTAGCTTTTAC YE1992 2176102 - 2174009 - | electron transport complex protein RnfC TERM 2431 2174070 - 2174086 + g 77 -10.1 -3.55548 | TTTACGCGAGCAATC GCTGCTG CCA CGGCAGC TTTGCGCGGATCTTC TERM 2432 2174184 - 2174200 + g 77 -10.1 -3.55548 | TTCACGCGGGCAATC GCTGCTG CCA CGGCAGC TTTGCGCGGATCTTC YE1993 2176718 - 2176095 - | electron transport complex protein RnfB TERM 2433 2176480 - 2176499 + g 73 -3.4 -4.91046 | overlap 2176480 AGCTTAAGCATCACT TGCTCGCC ACCG GGAGCGCA TTTGTTTATTTTCTC YE1994 2177299 - 2176718 - | Na(+)-translocating NADH-quinone reductase subunit E TERM 2434 2177214 - 2177185 - G 82 -12.2 -3.26471 | CCAGCCCCATACCAA TGGCGGTCTCCA GTTTTT TGGAGACCCCCA TGAAAGGGCACAGGC TERM 2435 2177390 - 2177355 - R 77 -4.7 -5.0538 | overlap 2177360 GCGGAGTCTAAAAAA GTAAAGCCGCCTATT ATCTAA AATTGGCGGCTTAAG AACAACAGATGAATA TERM 2436 2177385 - 2177360 - R 93 -9 -4.42765 | overlap 2177355 GTCTAAAAAAGTAAA GCCGCCTATT ATCTAA AATTGGCGGC TTAAGAACAACAGAT TERM 2437 2177409 - 2177420 + r 75 -5.8 -4.63586 | opp_overlap 2177409 AACAGATGAATAGCA GGGT TATT ACCC TTTTATCTGTCATAT YE1996 2178092 - 2177649 - | hypothetical protein TERM 2438 2177723 - 2177708 - G 77 -4.6 -4.91712 | overlap 2177710 TGTAAGGCACAAAAA CCGCCG CCGC CAGCAG GGGCCAACCCAAGGT TERM 2439 2178144 - 2178121 - R 75 -5.4 -4.76041 | gap 1, opp_overlap 2178121 TATATTCATCAAAAA GGATAACC-CA TCA TGCAGTTATCC CTTCTCTACATCACG YE1997 2179965 - 2178160 - | formate--tetrahydrofolate ligase TERM 2440 2180922 - 2180967 + G 78 -5.6 -4.90525 | overlap 2180923 TCCTTGATCCAAGTG CTGGTGTTATCAATGCTA TTGCAGTTTC TGGCATTGATATCACCAC TTTTCTTTCAGGTTA TERM 2441 2180923 - 2180966 + G 71 -9.1 -3.5323 | overlap 2180922 CCTTGATCCAAGTGC TGGTGTTATCAATGCTA TTGCAGTTTC TGGCATTGATATCACCA CTTTTCTTTCAGGTT YE1998 2180469 - 2182595 + | RTX family toxin transporter TERM 2442 2182662 - 2182646 - g 91 -4.3 -5.626 | overlap 2182647 GACGGTATAAAAAAA CGCTGGC AAC GCCATCA CGCTGCGAAACGAAC TERM 2443 2182971 - 2182953 - g 72 -11 -2.57211 | overlap 2182952 2182957 AGGTGCTGTTAGAAC TCAACCCC ATT GGGGTCGA TGCAGAAGTTAATAA TERM 2444 2183283 - 2183247 - g 73 -8.1 -3.98256 | overlap 2183231 2183230 2183245 CTTTGATGAAAAATA TTCATCAAAGATTGCAG GCA CTACAAACTCTGGTGAA ATCCAAGGCAATTGC YE1999 2182592 - 2183986 + | hemolysin transport protein TERM 2445 2184040 - 2184053 + G 71 -4.5 -4.57516 | TTGGCGGCGCTGGCC CGTGC TGCG GCATG TTTTGATTTGGCTGT YE2000 2183989 - 2186121 + | putative toxin transport protein TERM 2446 2186231 - 2186206 - T 77 -8.2 -3.9749 | gap 1 AGGCAGAAGAGTAAA GCGTCCGCGCC AGGGG GGCGCGG-CTC AAGCCCCCAGGGAGG araA 2187857 - 2186355 - | L-arabinose isomerase TERM 2447 2187478 - 2187462 - G 77 -8.7 -4.26881 | GCCGATAAAACCAAA CTCACGG CCA CCATGAG CAGTTTGGTTCAAGT araB 2189567 - 2187915 - | ribulokinase TERM 2448 2188125 - 2188103 - G 73 -5.4 -4.61231 | opp_overlap 2188104, overlap 2188104 2188105 CCACAGCGGCAAAAA TCGCCGCGCC CAA GGCGCAACAT TGATCGGATGCCACA TERM 2449 2188655 - 2188668 + g 74 -3.8 -4.83615 | TCCCGGCGATAGCCC GCTC ACCGAC GAGC TTTTTATCGGCAATC TERM 2450 2190062 - 2190052 - H 86 -3.2 -5.60993 | CTTCCTACAAAAAAA GTCC GGA GAAC ACTATGCATAAATTA araF 2190066 - 2191049 + | L-arabinose-binding periplasmic protein precursor araG 2191221 - 2192699 + | L-arabinose transporter ATP-binding protein araH 2192867 - 2193775 + | L-arabinose transporter permease protein araC 2193899 - 2194831 + | DNA-binding transcriptional regulator AraC TERM 2451 2195844 - 2195860 + G 71 -7.3 -4.07568 | TCCTGCCTACTATGC TGGCATT CGC GATGCCA TTTTGGGGACGGCAG YE2007 2194933 - 2195982 + | putative oxidoreductase TERM 2452 2196765 - 2196745 - g 72 -6.1 -4.31433 | overlap 2196747 GAGCGTCATAAGAAA CTGGTCAAT ATT ACTGACCGG TCATCGATTCTGTTG YE2008 2196154 - 2197167 + | hypothetical protein TERM 2453 2197280 - 2197311 + T 70 -5.8 -4.35518 | overlap 2197282 TTGGTTAGTGACTCG AAGCGCGTAGAACT TTTT AGTGATACGCGCTG TTTTGATATCCGGTT TERM 2454 2197282 - 2197309 + T 75 -8.4 -3.77806 | overlap 2197280 GGTTAGTGACTCGAA GCGCGTAGAACT TTTT AGTGATACGCGC TGTTTTGATATCCGG add 2198327 - 2197329 - | adenosine deaminase YE2010 2199721 - 2198525 - | putative aminotransferase malX 2201506 - 2199896 - | bifunctional maltose and glucose-specific PTS system components IICB TERM 2455 2200170 - 2200183 + g 77 -4.5 -4.92314 | gap 1, opp_overlap 2200170, overlap 2200168 GACTTGCCGCTAACA GC-GCC ACT GGCTGC TTTTTCTGCATTGCT TERM 2456 2201855 - 2201838 - g 93 -4.9 -5.68023 | gap 1 TGACAATTAAAAAAA CGACAATC ACT GAT-GTCG CTAAATTTGCTGGTG malI 2201822 - 2202853 + | DNA-binding transcriptional repressor MalI YE2013 2203402 - 2203043 - | hypothetical protein TERM 2457 2203538 - 2203521 - R 100 -10.5 -5.71712 | opp_overlap 2203511 2203521 TTTCAGATAAAAAAA CGGAGCC ATCA GGCCCCG TTGGTTTAATCTTTA TERM 2458 2203521 - 2203538 + r 73 -8.3 -3.63195 | opp_overlap 2203521, overlap 2203511 TTTCAGATAAAAAAA CGGAGCC ATCA GGCCCCG TTGGTTTAATCTTTA YE2014 2205125 - 2203551 - | hypothetical protein TERM 2459 2203927 - 2203937 + g 75 -3.2 -5.12617 | ATTGGGATGGTCAAT GTTG CGT CGAC TTTTTTCACTGATTG manA 2206532 - 2205357 - | mannose-6-phosphate isomerase TERM 2460 2206174 - 2206194 + g 85 -11.1 -3.81488 | TTGCGCTCGGCGGCA TCCAGCGGG ATA CCCGCTTGA TTCTCTTTGGCAAAG TERM 2461 2206201 - 2206213 + g 70 -7.7 -3.85817 | CCCGCTTGATTCTCT TTGGC AAA GCCAA TTTCTGCCGCAGCCT TERM 2462 2208062 - 2208048 - g 71 -7.1 -3.96893 | overlap 2208039 AAGAAAGCCCATAAA GAGGG GCTGA CCCTC AAGGCGGCGGCGCTG fumC 2206758 - 2208152 + | fumarate hydratase TERM 2463 2208165 - 2208185 + F 100 -14 -4.07133 | TAGCCTCGCTGGTAA CGCCGGGA TCTAT TCCCGGCG TTCTTTATGACAATA YE2017 2208458 - 2209177 + | LuxR family transcriptional regulatory protein tau 2210192 - 2209263 - | DNA replication terminus site-binding protein TERM 2464 2209602 - 2209615 + g 77 -4.5 -4.90778 | AGGGGGAACGGCACG GCCTG CATT TAGGC TTTTATTTAACTGCG blaA 2211228 - 2210344 - | beta-lactamase precursor TERM 2465 2211336 - 2211366 + r 75 -8.4 -3.85698 | opp_overlap 2211336 TCAGAAATAAAAAAA GGCTAAATGGCA GGGTAAG TGGCATTTAGCC TTTATAGCCGACACG TERM 2466 2211366 - 2211336 - R 100 -8.4 -6.02919 | opp_overlap 2211336 TCAGAAATAAAAAAA GGCTAAATGGCA GGGTAAG TGGCATTTAGCC TTTATAGCCGACACG YE2020 2211816 - 2211427 - | hypothetical protein YE2021 2213295 - 2212003 - | hypothetical protein TERM 2467 2212545 - 2212526 - G 79 -3.5 -5.1861 | gap 1, overlap 2212527 CCCATGATTAAAAAA CCCTCCGC GAACA GCAG-GGG TAAGCCCGAATCACG YE2022 2213472 - 2214383 + | LysR family transcriptional regulator TERM 2468 2215721 - 2215731 + G 73 -2.4 -5.14563 | AGCATATTTTGGTTG AGCC AAC GGCA TTTTTTAATCAGGGG mlc 2214604 - 2215821 + | ROK family transcriptional regulatory protein bioD 2216044 - 2216712 + | putative dethiobiotin synthetase YE2025 2218013 - 2216733 - | putative voltage-gated ClC-type chloride channel ClcB TERM 2469 2218067 - 2218046 - R 100 -13.7 -3.64915 | overlap 2218040 CGCTATAAAGTAGAA GGGCGCACC GAGA GGTACGCCC TGATAATCCAATGGA YE2026 2218795 - 2218424 - | hypothetical protein TERM 2470 2218776 - 2218762 - G 71 -2.7 -4.84359 | CTACGGGGAGAAAAA CGCGC ATCAG GCGGG GCAAGCTAGTTATTT TERM 2471 2219276 - 2219295 + G 77 -8.6 -4.17263 | gap 1 GGTTATTACTACCGG CAGCTGCCA GTC TGGC-GCTG TTTGTGTGGTTATTA YE2027 2219164 - 2219490 + | hypothetical protein YE2028 2220276 - 2219521 - | 3-hydroxy acid dehydrogenase YE2029 2221831 - 2220356 - | putative membrane transport protein TERM 2472 2222010 - 2221974 - R 75 -8.8 -3.6502 | opp_overlap 2221980, overlap 2221976 2221980 TACGCGGTACTGAAA GACAAAGCTGGCTG TGAATATAC CAGCCAGCTTTAAC TTTAATACTTGAACA TERM 2473 2222008 - 2221976 - R 78 -10 -3.40597 | opp_overlap 2221980, overlap 2221974 2221980 CGCGGTACTGAAAGA CAAAGCTGGCTG TGAATATAC CAGCCAGCTTTA ACTTTAATACTTGAA TERM 2474 2222004 - 2221980 - R 82 -8.6 -4.35044 | opp_overlap 2221980, overlap 2221976 2221974 GTACTGAAAGACAAA GCTGGCTG TGAATATAC CAGCCAGC TTTAACTTTAATACT TERM 2475 2221980 - 2222004 + r 75 -8.6 -3.87551 | opp_overlap 2221976 2221974 2221980 GTACTGAAAGACAAA GCTGGCTG TGAATATAC CAGCCAGC TTTAACTTTAATACT YE2030 2222310 - 2222032 - | hypothetical protein TERM 2476 2222926 - 2222945 + r 76 -9.2 -3.40611 | opp_overlap 2222927, overlap 2222924 2222927 CAACAGACACAAAAA AGCCCGCA CTGA TGCGGGCC TGTTGTTGGCATAAC TERM 2477 2222944 - 2222927 - R 100 -12.7 -5.46276 | opp_overlap 2222926 2222924 2222927 AACAGACACAAAAAA GCCCGCA CTGA TGCGGGC CTGTTGTTGGCATAA TERM 2478 2222927 - 2222944 + r 88 -12.7 -2.64045 | opp_overlap 2222927, overlap 2222926 2222924 AACAGACACAAAAAA GCCCGCA CTGA TGCGGGC CTGTTGTTGGCATAA YE2032 2223332 - 2222976 - | Phage/plasmid maintenance toxin/antidote system protein (toxin) YE2033 2223547 - 2223329 - | Phage/plasmid maintenance toxin/antidote system protein (antidote) TERM 2479 2223726 - 2223757 + H 74 -8 -3.96624 | gap 1, opp_overlap 2223721, overlap 2223736 2223748 AGCGACCGAAGTGCC CCTAGGGACA-GCCG CCT CGGCTTGTTGCTGGG TTTGTCATCAAGCTC TERM 2480 2223736 - 2223746 + H 75 -8.2 -3.76176 | overlap 2223726 GTGCCCCTAGGGACA GCCG CCT CGGC TTGTTGCTGGGTTTG TERM 2481 2223775 - 2223790 + H 87 -4.6 -5.47218 | overlap 2223748 2223776 TGTCATCAAGCTCAG CCCGCA CTTA TGCGGA TTTTTTTACATCAGA TERM 2482 2223776 - 2223789 + H 72 -8.1 -3.87608 | overlap 2223748 2223775 GTCATCAAGCTCAGC CCGCA CTTA TGCGG ATTTTTTTACATCAG YE2034 2224042 - 2224752 + | LuxR family transcriptional regulatory protein YE2035 2226117 - 2224870 - | putative membrane transport protein TERM 2483 2227322 - 2227306 - g 70 -2.1 -4.92756 | opp_overlap 2227311, overlap 2227308 2227310 2227311 ATCAGGAAAAACAAA CAGATGC CGA GCAGCGG CTTAATAATGACAAG YE2036 2226606 - 2227778 + | hypothetical protein TERM 2484 2227810 - 2227794 - T 78 -7.2 -4.43681 | opp_overlap 2227794 TACTCAAGAGTAAAA GCCCGC TCTAG ACGGGC TTGTCCGGAAGAATT TERM 2485 2227844 - 2227824 - T 73 -8.3 -3.61398 | opp_overlap 2227821 2227821 2227818 GCTTGTCCGGAAGAA TTGAGTCAG CTA CTGGCTCAA TAACTCTTTAACATC YE2037 2229179 - 2227833 - | hypothetical protein TERM 2486 2229670 - 2229683 + G 75 -5.2 -4.70659 | opp_overlap 2229669, overlap 2229672 GGACCATTCAACCAC CCCG CCAGTC CGGG TTTTTGAGTCTGGCG TERM 2487 2229810 - 2229828 + G 70 -2.3 -4.89852 | overlap 2229798 GTGCGGCCCCTTATT TGGGCGG TGGTT TCGGCCA TTTTTATCACTATGC yghU 2229341 - 2230192 + | putative glutathione S-transferase YghU TERM 2488 2230201 - 2230237 + T 100 -15.2 -3.91488 | opp_overlap 2230199 2230192, overlap 2230202 AAAATAGTATATATT CCGCCCTCAAGCCTGA TTTTC TCAGGGTTGAGGGCGC TTATTTAGCCCGCTT TERM 2489 2230202 - 2230236 + T 100 -18.7 -2.94411 | opp_overlap 2230199 2230192, overlap 2230201 AAATAGTATATATTC CGCCCTCAAGCCTGA TTTTC TCAGGGTTGAGGGCG CTTATTTAGCCCGCT YE2039 2231484 - 2230375 - | hypothetical protein YE2040 2231499 - 2231954 + | leucine-responsive regulatory protein TERM 2490 2232632 - 2232608 - T 91 -7.8 -4.81551 | opp_overlap 2232607 CACCGAGAGTAAAAA CAGTTTGGCG GTCAT CGCCAGACCG GTGGTATCAGCACCG YE2043 2233389 - 2232697 - | amino acid transport system permease protein YE2044 2234242 - 2233469 - | amino acid-binding periplasmic protein precursor YE2045 2235027 - 2234269 - | putative hydrolase TERM 2491 2234950 - 2234915 - G 89 -12.6 -3.54012 | overlap 2234923 AAAGTATCGACATAA GCCAGAAATTGTTGCC CGGT GGCAGCAATATCCGGC GCGCCCAATTGGGAT YE2047 2236402 - 2235413 - | putative hydrolase YE2048 2236516 - 2237382 + | LysR family transcriptional regulator TERM 2492 2237418 - 2237398 - T 100 -8.9 -5.61881 | opp_overlap 2237398 TTTGAAAAAGAAAAA CGCCACGGA CTG CCCGCAGCG TTTCATTCTTATTGG YE2049 2240038 - 2237459 - | putative autotransporter protein YE2050 2240892 - 2240179 - | LuxR family transcriptional regulatory protein TERM 2493 2240309 - 2240333 + g 71 -2.8 -4.88918 | overlap 2240311 AATGTATTGGCTATT TTCTTGTTGG TCTCT CCAGCCAGGA TTTTCTTTAAAATGG YE2051 2241111 - 2242058 + | LysR family transcriptional regulator amn 2243521 - 2242061 - | AMP nucleosidase TERM 2494 2243447 - 2243414 - G 78 -11.7 -3.07895 | overlap 2243435 CCCATCGCGAATATA GGCGCTGATAGCATC ACGC AATGCGCTCAGCGCC GCCTCGTATAATGTC TERM 2495 2243546 - 2243563 + H 70 -5.6 -4.33274 | overlap 2243545 TTCCGTTGGCTTGGT CAGCAA TCTGAT TTGCTG TTTTGATAATCTAAA TERM 2496 2243796 - 2243785 - g 79 -3.6 -5.24129 | overlap 2243787 2243788 CTGTTTCAGAAAAAA CACG CCAG CGCG TTCAGGCGGCGGCAA YE2053 2243670 - 2244665 + | putative transcriptional regulatory protein YE2054 2244805 - 2245617 + | putative inositol-1-monophosphatase TERM 2497 2245628 - 2245646 + F 71 -9.6 -2.90685 | opp_overlap 2245627 2245630, overlap 2245624 2245630 CATAGCTGACCGAAG TAGTGGGC GGT GCCTACTA TCTACTATCTACTTA YE2055 2245759 - 2247165 + | putative inner-membrane regulatory protein TERM 2498 2247503 - 2247467 - f 72 -8.1 -3.82604 | TGAGTCAATCAATAA TACCCTGTAACGGAA AAACCAG TTTCGTTGCAGGGTA AATCCTGAGAACCCG TERM 2499 2247775 - 2247760 - g 70 -2.5 -5.00616 | overlap 2247763 TTGCGTCTCAAAAAA CAGCA GCCGAT TGCCG ATTGTCTGGCGATCC TERM 2500 2247962 - 2247972 + G 71 -8.2 -3.73302 | opp_overlap 2247962 2247961 AAAAATCAGATAAAG CCGC TCA GCGG TTATTCGGTGTGTTG YE2057 2247673 - 2248977 + | putative virulence factor TERM 2501 2250688 - 2250669 - g 70 -7.8 -3.89614 | overlap 2250670 TTGAAGCGGGAGAAA CCGCAGGG AAAA CCCTACGA ATCGCCTCAATTGAT YE2058 2248982 - 2252017 + | putative virulence factor TERM 2502 2252205 - 2252220 + G 90 -7.6 -5.02476 | opp_overlap 2252205 2252204, overlap 2252219 TGAAATGTCATTAAC GCCAAT GAGT ATTGGC TTTTTTGGGCAATCT TERM 2503 2253622 - 2253610 - g 83 -4.7 -5.24416 | GAATCACAACAAAAA CAGCG CAT CGCAG AAACATTGCTTAAAG YE2059 2252014 - 2254440 + | putative virulence factor TERM 2504 2254450 - 2254480 + F 100 -12.6 -4.05033 | CCGTAACCTATTTTT CGCCCTTCCCGG TGCAATT CTGGGAAGGGTG TTTATCTGAGGTAAA TERM 2505 2254849 - 2254873 + F 100 -15 -4.85782 | gap 1, opp_overlap 2254849, overlap 2254866 2254868 AGAAAGATTCCCAAA CCCCGC-CGGC GCCA GCCGAGCGGGG TTTCTTTTTAGCCCC TERM 2506 2254873 - 2254849 - f 100 -15 -3.6292 | gap 1, opp_overlap 2254849 2254866 2254868 AGAAAGATTCCCAAA CCCCGC-CGGC GCCA GCCGAGCGGGG TTTCTTTTTAGCCCC ilvB 2254911 - 2256593 + | acetolactate synthase catalytic subunit ilvN 2256634 - 2256900 + | acetolactate synthase 1 regulatory subunit TERM 2507 2256998 - 2256955 - T 82 -7.6 -4.42386 | gap 1, opp_overlap 2256958 2256961, overlap 2256958 CGGGTATGGAGAAAA TAATAAGGGCG-TTATCGACA ATA TATCGTTAATCGCCCTTACTT CATGAAATTGCGTTA TERM 2508 2256995 - 2256958 - T 100 -11.5 -4.33182 | gap 1, opp_overlap 2256958 2256961, overlap 2256955 GTATGGAGAAAATAA TAAGGGCG-TTATCGACA ATA TATCGTTAATCGCCCTTA CTTCATGAAATTGCG YE2062 2257690 - 2257016 - | nucleotidase YE2063 2260158 - 2257783 - | hypothetical protein TERM 2509 2258587 - 2258569 - G 71 -8.8 -3.76402 | ACGGTAGGTATCAAA GGTTGCCG ACT CCGCAACC AGCGATTCAATAGGA TERM 2510 2260286 - 2260317 + H 72 -9.6 -3.10164 | AAACCACAGAGGTAT CCTGTAAATTGCAC TTAA GTCCAATTTATAGG TTAAATAATAAGTCG YE2064 2260560 - 2261339 + | hypothetical protein YE2065 2262545 - 2261532 - | hypothetical protein fucP 2263898 - 2262567 - | L-fucose permease TERM 2511 2263341 - 2263357 + g 76 -8.7 -4.04174 | TTCATGAATCTGTTC TGGCGTC ATT GATGCCA TTTGATTCTGTAAAC TERM 2512 2263730 - 2263714 - G 73 -3.7 -4.8543 | overlap 2263718 TAACCGCCATAAAAA GCACT TTGTACC AGTGC ACTGGCAAAATCGCT YE2067 2264829 - 2263900 - | putative carbohydrate kinase TERM 2513 2264006 - 2264019 + g 71 -6.7 -4.2828 | opp_overlap 2264005 GCAGCAAAAGCAGAT GCCAT TTCC ATGGC TTTTAATACATCGCC TERM 2514 2264722 - 2264745 + g 74 -9.6 -3.56837 | TGCCCCCTTCCCCCC GCACCCGATT TCAA AATCTGGTGC TTCTAATGTTTCCCC TERM 2515 2264986 - 2264971 - R 71 -4.8 -4.59846 | ACCAGAGAAAAATAA TGTTAT AATT ATAACA ATTGGTAAGCGGTAG TERM 2516 2265085 - 2265063 - R 84 -6.3 -5.04601 | gap 1, opp_overlap 2265063 TTTAGAAATGAAAAA TCCCGGC-CA CTAC TGCACCGGGA TTCTCAACAACAAGT phoA 2266518 - 2265109 - | alkaline phosphatase TERM 2517 2265688 - 2265699 + g 88 -7.2 -5.16841 | opp_overlap 2265688, overlap 2265690 GCCAGAACTGAATAA CCCC AACA GGGG TTTTTGTTGGTCTGC YE2069 2267458 - 2266718 - | putative short chain dehydrogenease gyrI 2268147 - 2267674 - | DNA gyrase inhibitor YE2071 2268762 - 2268244 - | hypothetical protein TERM 2518 2269017 - 2269038 + r 95 -13.1 -3.15544 | overlap 2269034 ATGCTGCCCGCAGGG TGAGCCTCA GGGA TGAGGCTCA TTAATCCCGATGAGC YE2073 2269891 - 2269076 - | hypothetical protein ogt 2270141 - 2270659 + | putative methylated-DNA--protein-cysteine methyltransferase TERM 2519 2270858 - 2270842 - g 74 -6.5 -4.41494 | opp_overlap 2270841, overlap 2270843 TACTTTGAATGAAAA TGAGCTG GAT CAGCTCG ATAATATCATTGAAA TERM 2520 2270857 - 2270843 - g 70 -10 -3.24414 | opp_overlap 2270841, overlap 2270842 ACTTTGAATGAAAAT GAGCTG GAT CAGCTC GATAATATCATTGAA fnr 2270732 - 2271487 + | fumarate/nitrate reduction transcriptional regulator YE2076 2271724 - 2272680 + | universal stress protein UspE TERM 2521 2272733 - 2272718 - T 100 -10.4 -4.75288 | TTAGAGCAAAAGAAA GGCCAC CTCG GTGGCC TTCAGACTGCTGACA TERM 2522 2272902 - 2272875 - T 86 -12 -3.14564 | GCACTTTGTCATTAA CCTCAGGGCCAC CTTA GTGGCCCTGAAT CAATACCCTGCCGCC pntB 2274310 - 2272919 - | pyridine nucleotide transhydrogenase pntA 2275957 - 2274431 - | NAD(P) transhydrogenase subunit alpha YE2079 2276228 - 2276049 - | hypothetical protein TERM 2523 2276948 - 2276937 - g 72 -5.8 -4.35044 | opp_overlap 2276937, overlap 2276931 GCAGCGAAAGAGAAA GGAG CATA CTCC TTCTTCATCGTGCGC TERM 2524 2277286 - 2277243 - g 82 -12 -3.1355 | gap 1, opp_overlap 2277236 2277251, overlap 2277254 GGCACCCAGATCCAA GAATTAAACAATACCA-CTGC CGC GCAGATGGTACCGTTTGATTC TGTGACCTTTAGCGG TERM 2525 2277275 - 2277254 - g 75 -8.1 -4.15577 | gap 1, opp_overlap 2277251 2277236, overlap 2277243 CCAAGAATTAAACAA TACCA-CTGC CGC GCAGATGGTA CCGTTTGATTCTGTG YE2080 2276490 - 2277443 + | hypothetical protein TERM 2526 2277461 - 2277491 + F 100 -14 -3.14564 | opp_overlap 2277455 2277467 CTGTTTAAATTATCA CCATAAGGGCAGCC ATC GGCTGTCCTTGAGG TTAATGACAAAGTGC TERM 2527 2277485 - 2277467 - f 80 -10.2 -3.46138 | opp_overlap 2277461, overlap 2277455 AAATTATCACCATAA GGGCAGCC ATC GGCTGTCC TTGAGGTTAATGACA TERM 2528 2277565 - 2277591 + F 74 -7.9 -3.9749 | gap 1, overlap 2277564 CCTCCCTGGGGGCTC GAG-CCGCGCCG TCCC TGGCGCGGACGC TTTACTCTTCTACCT TERM 2529 2277655 - 2277673 + F 100 -12.4 -5.63645 | TGTCAGCAGTCTGAA GGGCAGCC ATC GGCTGTCC TTTTTTATATTTTAG TERM 2530 2277920 - 2277906 - g 73 -3.4 -4.90525 | opp_overlap 2277916 2277918, overlap 2277908 TAATTGGAAAGAAAA CTCGGC CTA ACCGCG CTCACTGCGCTGGTT TERM 2531 2278116 - 2278145 + G 70 -2.2 -4.99035 | gap 1 GGAATATTCACCTAT GCCAAAGAAGGTT TTGGT GACCTTATT-GGC TTTTTCTCTGCCTGG TERM 2532 2279056 - 2279043 - g 73 -8.1 -4.08064 | opp_overlap 2279043 2279042 2279038 AAGGTGGCTTTAAAA CGCCA GGAC TGGCG CTTGATTATTGCCGC YE2081 2277894 - 2279285 + | putative amino acid antiporter TERM 2533 2279332 - 2279305 - T 74 -9.2 -3.34192 | gap 1, opp_overlap 2279327, overlap 2279323 AACCGGCCGAATCAA TGGGTACGCCAGT TAA ACTGGC-TGCCCA TGTGGGCATCTATCG YE2082 2279772 - 2279356 - | hypothetical protein TERM 2534 2279591 - 2279603 + g 80 -2.6 -5.37345 | overlap 2279589 GCCAGGGCGGTAAGC CGCT CCTGA GGCG TTTTTTCTAGTTCCG TERM 2535 2279981 - 2279995 + H 73 -3.5 -5.03314 | opp_overlap 2279971, overlap 2279953 ACCAACAGCGCGCTA TGCTG AATTC CGGCA TTTTTTAAAACTGAA rstA 2280015 - 2280743 + | DNA-binding transcriptional regulator RstA TERM 2536 2280947 - 2280933 - g 75 -5.6 -4.6759 | opp_overlap 2280932 2280933 AAGATTGGAATAAAA CCATCG CCA CGCTGG ATTTAAATCTCTCTT rstB 2280770 - 2282047 + | sensor protein RstB TERM 2537 2283419 - 2283431 + G 71 -9.1 -3.54307 | opp_overlap 2283409 2283419 2283417 AATTAGATAGCAATA TCGCC AAT GGCGA TTTGAGCACCCTATT YE2085 2282083 - 2283576 + | putative carboxypeptidase TERM 2538 2283605 - 2283637 + F 89 -11.4 -3.48924 | gap 1 CAGATTTTTTTCCTT CGGTACTGCC-CTTC CTTT GAGGAGGCAGTATCG TTCTGTGGAACATAA TERM 2539 2283935 - 2283920 - f 71 -8.2 -3.41051 | CTATTCTCACTACAA CGACCC AACG GGGCCG ATATACAAACAGAAC TERM 2540 2284127 - 2284117 - g 89 -3.2 -5.67063 | TGCATCACAAAAAAA CGAC AAA ATCG GTGAAGAAAGCCGAC asr 2283966 - 2284241 + | putative acid shock protein TERM 2541 2284304 - 2284321 + F 100 -12.7 -5.24531 | opp_overlap 2284306 ACTTCACTCGCTCAA CACCCGG TTCT CCGGGTG TTTTTTATCAGGAGT TERM 2542 2284319 - 2284306 - f 71 -9.5 -3.02511 | opp_overlap 2284304 TTCACTCGCTCAACA CCCGG TTCT CCGGG TGTTTTTTATCAGGA YE2087 2284642 - 2285484 + | protease YE2088 2285863 - 2285540 - | putative DNA-binding phage-related protein YE2089 2286174 - 2285860 - | hypothetical protein TERM 2543 2286476 - 2286514 + r 81 -11 -3.24597 | opp_overlap 2286479, overlap 2286474 2286479 GATCTAGCGGTAAAA AAACTCCGTGCCTGAG CCATTAT CTCAGGCGCGGAGTCG TCTTGATTAGCCATT TERM 2544 2286511 - 2286479 - R 100 -14.9 -5.42259 | opp_overlap 2286479 2286476 2286474 CTAGCGGTAAAAAAA CTCCGTGCCTGAG CCATTAT CTCAGGCGCGGAG TCGTCTTGATTAGCC TERM 2545 2286479 - 2286511 + r 100 -17.1 -2.80699 | opp_overlap 2286479, overlap 2286476 2286474 CTAGCGGTAAAAAAA CTCCGTGCCTGAG CCATTAT CTCAGGCGCGGAG TCGTCTTGATTAGCC hrpA 2290370 - 2286528 - | ATP-dependent RNA helicase HrpA TERM 2546 2287915 - 2287933 + g 85 -6 -5.055 | TTAACTTTGTTTGCA CCATCCTT GAT AAGCATGG TTTTTTCAAAGTTGA TERM 2547 2288465 - 2288455 - G 71 -6.8 -4.15044 | GGTTTTTTGAATAAA CCAG AGC CTGG GAAGATGGCAAAACG YE2091 2291825 - 2290584 - | hypothetical protein TERM 2548 2292055 - 2292042 - H 74 -6.7 -4.25064 | overlap 2292039 AAATCGAACAAAGAA CGCAA AATA TTGCG CTATCACTGATAGAA acpD 2292282 - 2292887 + | azoreductase TERM 2549 2292980 - 2293005 + T 79 -11.1 -3.14564 | opp_overlap 2292979 2292982 ATAGTATTATTGAAT CATTACGCGCC TTTG GGCGCGTGAGG TTAATGACAAAGTGC TERM 2550 2293003 - 2292982 - T 72 -10.1 -2.76442 | opp_overlap 2292980, overlap 2292979 AGTATTATTGAATCA TTACGCGCC TTTG GGCGCGTGA GGTTAATGACAAAGT TERM 2551 2293079 - 2293105 + T 74 -7.9 -3.9749 | gap 1, overlap 2293088 CCTCCCTGGGGGCTC GAG-CCGCGCCG TCCG TGGCGCGGACGC TTTACTCTTCTACCT TERM 2552 2293088 - 2293104 + T 73 -10.1 -2.97771 | overlap 2293079 GGGCTCGAGCCGCGC CGTCCGT GGC GCGGACG CTTTACTCTTCTACC YE2095 2293824 - 2293453 - | hypothetical protein YE2096 2294019 - 2293834 - | putative lipoprotein YE2097 2296658 - 2294025 - | hypothetical protein TERM 2553 2297905 - 2297891 - g 75 -5.6 -4.74103 | overlap 2297893 TGCGCAACTGAAAAA GGGCGA GCC TTGCCC GAATATTGTTTCTGC hslI 2296932 - 2297924 + | D-lactate dehydrogenase YE2099 2298373 - 2298056 - | putative lipoprotein TERM 2554 2299034 - 2299045 + G 77 -4.4 -5.10033 | AAGTAACCGATTTAT TGGT CAAC ACCA TTTTGTTTCTATTAA YE2100 2298612 - 2299271 + | putative Mg(2+) transport ATPase TERM 2555 2299318 - 2299356 + T 100 -15.4 -3.63627 | overlap 2299319 AATCACAGTTATCCC TTTCCGCGTTATCGCCAC AGG GTTACGATAACGCGGAAG TTTGCAGTATGACGG TERM 2556 2299319 - 2299355 + T 100 -16.7 -2.77962 | overlap 2299318 ATCACAGTTATCCCT TTCCGCGTTATCGCCAC AGG GTTACGATAACGCGGAA GTTTGCAGTATGACG qacE 2299712 - 2299380 - | quaternary ammonium compound-resistance protein TERM 2557 2300970 - 2300986 + G 71 -8.7 -3.62522 | GCGGGGAAAAAGTGG GCGTACT GAA AGTGCGC TTATTCCGCCCCTTC TERM 2558 2301476 - 2301466 - g 83 -8.2 -4.63527 | opp_overlap 2301469, overlap 2301467 TTACGACTCGAAAAA GGCC GGT GGCC TGACCGTCTCTCACT TERM 2559 2301669 - 2301651 - g 71 -8.8 -3.73224 | TCAGCGCTGATGAAA TGTGGCAG CGT CTGCCGCA AGAAGTTCAGGCGGT TERM 2560 2302123 - 2302112 - g 75 -5.8 -4.60041 | ACCCAGTGGGAAAAA CGCA ATAT TGCG GAAGATATTCCTATC nifJ 2300090 - 2303623 + | putative pyruvate-flavodoxin oxidoreductase TERM 2561 2303651 - 2303675 + T 91 -6.4 -5.44119 | opp_overlap 2303652, overlap 2303652 ATGCGCGCCCCTAAA ACCAGTCAGT GAAAA GCTGACTGGC TTTTTTTAGGCTACC TERM 2562 2303674 - 2303652 - T 83 -9.2 -4.07568 | opp_overlap 2303652 2303651 TGCGCGCCCCTAAAA CCAGTCAG TGAAAAG CTGACTGG CTTTTTTTAGGCTAC TERM 2563 2303652 - 2303674 + T 84 -9.9 -3.85748 | opp_overlap 2303652, overlap 2303651 TGCGCGCCCCTAAAA CCAGTCAGT GAAAA GCTGACTGG CTTTTTTTAGGCTAC arbB 2305058 - 2303703 - | beta-glucosidase arbF 2307097 - 2305196 - | PTS system beta-glucoside-specific IIABC component arbG 2308015 - 2307182 - | beta-glucoside operon antiterminator TERM 2564 2308032 - 2308074 + H 100 -15.9 -3.62597 | opp_overlap 2308034, overlap 2308034 2308041 TTCCACCCAAAAAAA AAGGCAAAACTTAAAAGAG TCATT CTCTTTTAGGTTTTGCCTG TTCTTACACAGTAAC TERM 2565 2308034 - 2308072 + H 100 -18.5 -3.39288 | opp_overlap 2308034, overlap 2308032 2308041 CCACCCAAAAAAAAA GGCAAAACTTAAAAGAG TCATT CTCTTTTAGGTTTTGCC TGTTCTTACACAGTA TERM 2566 2308072 - 2308034 - H 100 -16.3 -6.11644 | opp_overlap 2308034 2308032 2308041 CCACCCAAAAAAAAA GGCAAAACTTAAAAGAG TCATT CTCTTTTAGGTTTTGCC TGTTCTTACACAGTA TERM 2567 2308041 - 2308065 + H 79 -8 -4.32048 | opp_overlap 2308034, overlap 2308034 2308032 AAAAAAAAGGCAAAA CTTAAAAGAG TCATT CTCTTTTAGG TTTTGCCTGTTCTTA TERM 2568 2308377 - 2308418 + G 72 -5.9 -4.39287 | opp_overlap 2308384, overlap 2308378 2308383 2308384 CGATTTGAACAAATT ACAGAAA-CGCCTGCGCCG CAATGT CGGC-CAGGCGATTGCTGA TTTTAATATGATTGA TERM 2569 2308410 - 2308384 - g 91 -11.6 -4.20027 | gap 1, opp_overlap 2308384 2308383 2308378 2308377 AACAAATTACAGAAA CGCCTGCGCCG CAATGT CGGC-CAGGCG ATTGCTGATTTTAAT TERM 2570 2308384 - 2308410 + G 75 -11.6 -2.6244 | gap 1, opp_overlap 2308384, overlap 2308383 2308378 2308377 AACAAATTACAGAAA CGCCTGCGCCG CAATGT CGGC-CAGGCG ATTGCTGATTTTAAT TERM 2571 2308757 - 2308778 + G 71 -10.1 -2.80074 | opp_overlap 2308757, overlap 2308752 TGGGAGCCACTAAAA TCGCGCTGG GTCA CCATCGCGA TGATATTCTGCAAAC TERM 2572 2308778 - 2308757 - g 85 -10.1 -4.2828 | opp_overlap 2308752 2308757 TGGGAGCCACTAAAA TCGCGCTGG GTCA CCATCGCGA TGATATTCTGCAAAC YE2106 2308324 - 2309265 + | C32 tRNA thiolase TERM 2573 2309380 - 2309356 - T 100 -17.3 -6.28401 | TAAAAAACAAAAAAA TGCCGATGTTG AGA CAACATCGGCA TCGTAACAATTATGT zntB 2310562 - 2309579 - | zinc transporter TERM 2574 2311489 - 2311448 - R 71 -9.6 -3.06133 | opp_overlap 2311448, overlap 2311452 TAAGTTTCGACTCAA CCAATTAACCCGCAAGAA TGAATT CCCTTGTAGGTTAATTGG TTAATGACAACTAGT mppA 2313116 - 2311500 - | putative periplasmic murein peptide-binding protein YE2111 2313263 - 2313970 + | murein peptide amidase A YE2112 2314938 - 2313967 - | putative mandelate racemase / muconate lactonizing protein tpx 2315091 - 2315594 + | thiol peroxidase TERM 2575 2315656 - 2315632 - T 100 -14.3 -4.20769 | opp_overlap 2315632 AGAGTTTAATACAAA CGGCTGCCCCT CTC AGGAACAGCCG TTTTTTATGGTTTTA TERM 2576 2315632 - 2315656 + T 100 -9.9 -5.4588 | opp_overlap 2315632 AGAGTTTAATACAAA CGGCTGCCCCT CTC AGGAACAGCCG TTTTTTATGGTTTTA tyrR 2317294 - 2315717 - | DNA-binding transcriptional regulator TyrR YE2115 2317614 - 2318060 + | hypothetical protein YE2116 2318124 - 2318582 + | hypothetical protein YE2117 2319649 - 2318585 - | hypothetical protein YE2118 2321043 - 2319646 - | hypothetical protein TERM 2577 2320903 - 2320882 - G 75 -5.8 -4.50976 | GCGCACAGCAGAAAA CAGCGGCA AACGCG CACCGCTG TGGACATGAAGTAAT pspC 2321659 - 2321309 - | DNA-binding transcriptional activator PspC pspB 2321955 - 2321728 - | phage shock protein B TERM 2578 2322085 - 2322060 - R 73 -8.9 -3.41051 | GCATTTTCATCATAA CGGGCCGCC TTTATGCC GGCGGCCTG GCGAGGTATTTTCCT pspA 2322782 - 2322117 - | phage shock protein PspA TERM 2579 2323271 - 2323283 + G 75 -5.5 -4.66609 | opp_overlap 2323242, overlap 2323263 2323262 TTTTGAACGTGCAGA TGGCG GCA CGCTA TTTTTAGATGAACTG TERM 2580 2323974 - 2323956 - g 85 -6 -5.03314 | GGCATGTTGAAAAAA CACTCAAT ATT AATGAGTG AGAATGATCCACAAT pspF 2322972 - 2323991 + | phage shock protein operon transcriptional activator ytxB 2324400 - 2324044 - | putative lipoprotein TERM 2581 2324413 - 2324441 + r 80 -10.5 -3.57144 | opp_overlap 2324408 2324418, overlap 2324414 CATAATATAACTCCT ATTAATGTTACTC GTC GAGTAACATTAAG TTTAAGGCTAAAAAA TERM 2582 2324414 - 2324440 + r 95 -14 -2.74144 | opp_overlap 2324408 2324418, overlap 2324413 ATAATATAACTCCTA TTAATGTTACTC GTC GAGTAACATTAA GTTTAAGGCTAAAAA TERM 2583 2324436 - 2324418 - R 77 -10.4 -3.17219 | opp_overlap 2324414 2324413, overlap 2324408 TATAACTCCTATTAA TGTTACTC GTC GAGTAACA TTAAGTTTAAGGCTA ytxA 2325276 - 2324449 - | putative enterotoxin subunit TERM 2584 2324550 - 2324564 + g 71 -2.8 -4.93365 | AATCAAGGGGGGTAA GGGA GTAAATA TCCC TTTTTAATTCTGCAC TERM 2585 2325499 - 2325482 - H 100 -8.4 -6.23209 | GCAAGCAAAAAAAAA GCCAGC ACCCGA GCTGGC TTAAAAAACACTGGA TERM 2586 2325521 - 2325508 - H 71 -3.1 -5.00884 | AGCTGGCTTAAAAAA CACTG GAAG CAATG TGAGCAATGTCGTGC TERM 2587 2325826 - 2325800 - H 74 -7.9 -3.9749 | gap 1, overlap 2325801 AGGTAGAAGAGTAAA GCGTCCGCGCCA CGGA CGGCGCGG-CTC GAGCCCCCAGGGAGG TERM 2588 2325817 - 2325801 - H 73 -10.1 -2.97771 | overlap 2325800 GGTAGAAGAGTAAAG CGTCCGC GCC ACGGACG GCGCGGCTCGAGCCC sapA 2326034 - 2327707 + | peptide transport periplasmic protein precursor TERM 2589 2328369 - 2328352 - g 73 -8.3 -3.89971 | opp_overlap 2328352 CAGAATTATATTAAA GCAGCGG CCAC CCGCGGC TTATCCAGATTCACT sapB 2327704 - 2328669 + | peptide transport system permease protein sapC 2328656 - 2329546 + | peptide transport system permease protein sapD 2329546 - 2330538 + | peptide transport system ATP-binding protein sapF 2330538 - 2331353 + | peptide transport system ATP-binding protein TERM 2590 2331403 - 2331428 + F 78 -7.5 -4.49981 | overlap 2331404 2331405 CCGCACACAAACCTG CCTCCGCGATC GTCT GATCGCGGAAA TTTTATGATGCTATC TERM 2591 2331404 - 2331427 + F 81 -11 -3.29266 | overlap 2331403 2331405 CGCACACAAACCTGC CTCCGCGATC GTCT GATCGCGGAA ATTTTATGATGCTAT TERM 2592 2331405 - 2331426 + F 100 -14.5 -2.56836 | overlap 2331404 2331403 GCACACAAACCTGCC TCCGCGATC GTCT GATCGCGGA AATTTTATGATGCTA YE2130 2331499 - 2331741 + | hypothetical protein YE2131 2331753 - 2332964 + | hypothetical protein YE2132 2333891 - 2333007 - | LysR family transcriptional regulator TERM 2593 2334212 - 2334197 - H 87 -5.4 -5.54338 | TAATCAAAACAAAAA TTCGCC AAAC AGCGAA AACATAAACGTTAAT tppB 2334496 - 2335962 + | putative tripeptide transporter permease TERM 2594 2335998 - 2335981 - T 93 -12.7 -3.01712 | GCTGGCTGGTTAAGA GCGCTCC TTCG GGAGCGC TTCAGACTGCTGACA TERM 2595 2336088 - 2336062 - T 74 -7.9 -3.9749 | gap 1, overlap 2336063 AGGTAGAAGAGTAAA GCGTCCGCGCCA GGGA CGGCGCGG-CTC GAGCCCCCAGGGAGG TERM 2596 2336164 - 2336189 + T 78 -5.3 -5.07567 | opp_overlap 2336165, overlap 2336168 ACTTTGTCATTAACC ATGAGCGCTCC TTCG GGAGCGCTTTC TTTTTTGGCATCTGC TERM 2597 2336168 - 2336185 + T 100 -12.7 -5.05153 | opp_overlap 2336165, overlap 2336164 TGTCATTAACCATGA GCGCTCC TTCG GGAGCGC TTTCTTTTTTGGCAT YE2134 2336564 - 2336211 - | hypothetical protein TERM 2598 2336313 - 2336327 + g 71 -4.2 -4.74453 | opp_overlap 2336292, overlap 2336292 GACAATCTTGGCACC CGTCTG TTC CAAACG TTTTTGCATCTGTTC YE2135 2336785 - 2337375 + | hypothetical protein TERM 2599 2337396 - 2337432 + F 70 -9.5 -2.80438 | gap 1, opp_overlap 2337390, overlap 2337391 TAAAATAACTGCGGT GC-TCCGCTCTTGGCA TTATTT TGCTGAGAGCGGGTGC TAATTCCCTATTTGA YE2136 2337561 - 2337824 + | hypothetical protein TERM 2600 2337925 - 2337937 + F 79 -3.4 -5.38047 | ATAATTATATTACAT TGCA CTAGC TGCA TTTTTTGTCTGCCTG gst 2338006 - 2338614 + | glutathionine S-transferase pdxY 2339526 - 2338666 - | pyridoxamine kinase TERM 2601 2339560 - 2339592 + r 74 -6.4 -4.4261 | opp_overlap 2339565, overlap 2339565 ATAAACCATCAGCAA AAAAATAAGGGACA TATCT TGCCCCTTATTTTC TTTTACTCTTACAGC TERM 2602 2339565 - 2339587 + r 87 -6.3 -5.17488 | opp_overlap 2339565, overlap 2339560 CCATCAGCAAAAAAA TAAGGGACA TATCT TGCCCCTTA TTTTCTTTTACTCTT TERM 2603 2339587 - 2339565 - R 100 -8.5 -5.55664 | opp_overlap 2339565 2339560 CCATCAGCAAAAAAA TAAGGGACA TATCT TGCCCCTTA TTTTCTTTTACTCTT tyrS 2340875 - 2339601 - | tyrosyl-tRNA synthetase TERM 2604 2339980 - 2339990 + g 71 -8.2 -3.64192 | overlap 2339984 GCCAACACGTATTGA GCGC GCG GCGC TTTGCCACTGTTTTT TERM 2605 2340410 - 2340441 + g 82 -11.8 -3.37487 | overlap 2340408 AACGCTGTTTGACGG CTTCTTTGTTGATC ATCT GATTAACAGAGAAG TGTTTGCCGATATCA pdxH 2341778 - 2341125 - | pyridoxamine 5'-phosphate oxidase TERM 2606 2341847 - 2341806 - R 79 -11.1 -2.96695 | gap 1, overlap 2341803 TCGCGCAGGAAAGCA GTGATTGTCATTTTGCC-CT CAC AGCGGCAGAATCACAATCAC CCTGAGCCGACAACA TERM 2607 2341998 - 2342024 + r 74 -7.9 -3.9749 | gap 1, overlap 2341992 2341997 CCTCCCTGGGGGCTC GAG-CCGCGCCG TTCC TGGCGCGGACGC TTTACTCTTCTACCT YE2141 2342387 - 2342034 - | putative lipoprotein TERM 2608 2342088 - 2342102 + g 83 -7.2 -4.81551 | CGTCAGCAGTCTGCA GTCATT GAT AATGAC TTTTTCGTCTCGCTC anmK 2343555 - 2342443 - | anhydro-N-acetylmuramic acid kinase pcpY 2344000 - 2344467 + | outer membrane lipoprotein TERM 2609 2344504 - 2344534 + T 100 -12.7 -4.77036 | opp_overlap 2344507, overlap 2344507 TATGATGTCATCCGT AAAGCCAGAGATC ATTGC GATCTCTGGCTTA TTTTTACTGCTAAAA TERM 2610 2344531 - 2344507 - T 100 -15.1 -3.57462 | opp_overlap 2344504 2344507 GATGTCATCCGTAAA GCCAGAGATCA TTG CGATCTCTGGC TTATTTTTACTGCTA TERM 2611 2344507 - 2344531 + T 100 -14.4 -4.49314 | opp_overlap 2344507, overlap 2344504 GATGTCATCCGTAAA GCCAGAGATC ATTGC GATCTCTGGC TTATTTTTACTGCTA TERM 2612 2344535 - 2344550 + T 71 -3.4 -5.03227 | GCGATCTCTGGCTTA TTTTTA CTGC TAAAAA TTTTCTTTCTGCTGT horYe 2345020 - 2344589 - | transcriptional regulator SlyA TERM 2613 2345376 - 2345387 + G 74 -4.4 -4.98255 | opp_overlap 2345376, overlap 2345365 GGCATCCAATATTAA TGGA TCTG TCCA TTTTTGTCATTGCGG YE2145 2345201 - 2345437 + | putative inner membrane protein YE2146 2345444 - 2346301 + | putative hlyD-family protein YE2147 2346304 - 2348328 + | hypothetical protein TERM 2614 2348344 - 2348314 - T 85 -9.6 -4.21141 | overlap 2348315 GGCGAAGAAAGCAAA GTTGCGCCAGCCTG AGG CTCGCTGGCGCAAA GGATAAAATTAAGGC TERM 2615 2348343 - 2348315 - T 95 -13.1 -3.11962 | overlap 2348314 GCGAAGAAAGCAAAG TTGCGCCAGCCTG AGG CTCGCTGGCGCAA AGGATAAAATTAAGG YE2148 2349249 - 2348353 - | putative aldo/keto reductase YE2149 2349625 - 2349386 - | hypothetical protein TERM 2616 2349585 - 2349554 - G 87 -11 -4.15006 | gap 1, opp_overlap 2349543, overlap 2349579 ACACCCACGGCAAAA GCCACGGTCATCTGT TTG ACAGAT-ACCACGGC ATGGGCTGGGGATGT TERM 2617 2349621 - 2349608 - G 74 -3.1 -5.0538 | GGGGATGTCAAAAAA CTCAA GTTG CTGAG CCAAATCGCCTCTCC TERM 2618 2350249 - 2350231 - g 73 -7.4 -4.23723 | opp_overlap 2350224 CAATATGATGCAAAA TGCGTTTG AGA CCAACGCA CAGGAAGCAACCGCC TERM 2619 2350487 - 2350473 - g 74 -4.3 -4.89477 | overlap 2350477 TCCGGAATAATAAAA GCATT GTTAA AATGC TAACACCGTCCAATT YE2150 2349917 - 2351548 + | putative cell division protein TERM 2620 2351604 - 2351626 + F 100 -12 -5.80364 | AGATATCTATATTGA TGCCAGCGTA CTC TCCGCTGGCA TTTTTTTCTTGACCT YE2151 2351671 - 2352273 + | TetR family transcriptional regulator TERM 2621 2352627 - 2352609 - g 87 -5.3 -5.40474 | ACGCCTGGAAAAAAA TCACGCA AGCTG TGCATGA TGAAGGTGGACATAT YE2152 2352350 - 2353447 + | N-ethylmaleimide reductase TERM 2622 2353476 - 2353510 + F 100 -13.6 -3.66883 | overlap 2353482 GTAAATCAATTTCTC TGCTCACGGTCAGGCA ATA TGCCTGGCCGTTATCA TTTGCAGTCTATTCA TERM 2623 2353482 - 2353504 + F 100 -15.6 -3.60865 | overlap 2353476 CAATTTCTCTGCTCA CGGTCAGGCA ATA TGCCTGGCCG TTATCATTTGCAGTC TERM 2624 2353942 - 2353960 + G 72 -6 -4.37886 | CAGGCCCGGTCAAGG GCGGTAAC ACG GTTATTGC TTTTGTCGAAGATCC gloA 2353629 - 2354036 + | lactoylglutathione lyase TERM 2625 2354025 - 2354011 - f 70 -3.5 -4.80959 | gap 1, overlap 2354012 2354013 TAATCGAGAATAAAA GTGCCG GACA CGGC-C TCGGAAACTGATTAG TERM 2626 2354047 - 2354063 + F 100 -12.3 -5.31275 | opp_overlap 2354047 ACTGATTAGCAAGAA GGCACCT GCA AGGTGCC TTTTTTCTCATCGCG TERM 2627 2354063 - 2354047 - f 100 -12.3 -3.75292 | opp_overlap 2354047 ACTGATTAGCAAGAA GGCACCT GCA AGGTGCC TTTTTTCTCATCGCG rnt 2354147 - 2354794 + | ribonuclease T TERM 2628 2354852 - 2354835 - T 100 -9.1 -5.1861 | TTCACTATTAAAAAA GGTGGCC TGCG AGCCACC TCAGACTGCTGACAA TERM 2629 2354941 - 2354915 - T 74 -7.9 -3.9749 | gap 1, opp_overlap 2354922, overlap 2354916 AGGTAGAAGAGTAAA GCGTCCGCGCCA CGGA CGGCGCGG-CTC GAGCCATCAGGGACG TERM 2630 2354932 - 2354916 - T 73 -10.1 -2.97771 | opp_overlap 2354922, overlap 2354915 GGTAGAAGAGTAAAG CGTCCGC GCC ACGGACG GCGCGGCTCGAGCCA TERM 2631 2355020 - 2355038 + T 100 -10.3 -5.47159 | TTGTCAATAACCTCA GGCAGCT TAAGT AGCTGCC TTTTTATTTATTACC YE2155 2355413 - 2355069 - | hypothetical protein TERM 2632 2355733 - 2355711 - H 70 -2.6 -5.00884 | AGCCGTGTGAAAAAA CGACAATTGC GAC GCCATTAACG TTTTCTCACAATATC TERM 2633 2356105 - 2356091 - g 87 -5.6 -5.3658 | overlap 2356092 ACGATAAAAAGAAAA CGGCAG CTA CCGCCA GCAAAACCATTAAGA TERM 2634 2356337 - 2356327 - g 79 -3.2 -5.24129 | CCTGCGCATAAAAAA CGCT ATC AGCA TGCTAAACAGACCGC YE2156 2355847 - 2356737 + | hypothetical protein TERM 2635 2356748 - 2356771 + F 100 -13.2 -3.53722 | opp_overlap 2356743 2356746 2356744 GCTAAACCAAGCACC GCACCCGGTA GCCC TATCGGGTGC TTGTATACCTGTCAA sodB 2356988 - 2357566 + | superoxide dismutase TERM 2636 2357643 - 2357614 - f 70 -5.8 -4.24745 | gap 1, opp_overlap 2357618 2357621, overlap 2357621 TATTACCAACAGAAA TAATTAAGGGCGG GTTAA CCGCCC-TACTTA TCACTTCACACCGGC TERM 2637 2357621 - 2357637 + F 77 -10.8 -2.86539 | opp_overlap 2357614 2357621, overlap 2357618 AACAGAAATAATTAA GGGCGG GTTAA CCGCCC TACTTATCACTTCAC TERM 2638 2357637 - 2357621 - f 84 -10.8 -3.68209 | opp_overlap 2357621 2357618, overlap 2357614 AACAGAAATAATTAA GGGCGG GTTAA CCGCCC TACTTATCACTTCAC purR 2358092 - 2359117 + | DNA-binding transcriptional repressor PurR TERM 2639 2359141 - 2359176 + T 89 -12 -3.29144 | gap 1, opp_overlap 2359141 2359140 ATCATCGCTAAACAT TTAGTCTGCCGGTAGCG CCC TGTTACCGGCGG-CTAA TTCTGCCGAAGCTCA YE2159 2360111 - 2359173 - | putative DNA-binding transcriptional regulator TERM 2640 2361021 - 2361067 + G 81 -3.2 -5.47821 | gap 3 CAATTACTGAAGTCT CCGGTATT-CA-GCGGCAA-CGT GATG ATGTTTGCTGCATGCAGTGCCGG TTTTTTTGCCTGGCT YE2160 2360403 - 2361620 + | inner membrane transport protein YdhC TERM 2641 2361798 - 2361810 + F 82 -7.7 -4.51224 | CTTATGGATGAGTAG CCCTA AAT TAGGG TTTCTTCTTAATCTT cdfA 2361928 - 2363079 + | cyclopropane fatty acyl phospholipid synthase TERM 2642 2363115 - 2363147 + T 75 -7.1 -4.30995 | gap 1, opp_overlap 2363120, overlap 2363120 TAAAAAGACAGACTT AAAAAGGCAGGAGC ACATCA GC-CCTGCCTTTTA TTATTTTATACGCGA TERM 2643 2363142 - 2363120 - T 79 -7 -4.73448 | gap 1, opp_overlap 2363120 2363115 AGACAGACTTAAAAA GGCAGGAGC ACATCA GC-CCTGCC TTTTATTATTTTATA TERM 2644 2363120 - 2363142 + T 88 -7 -5.12916 | gap 1, opp_overlap 2363120, overlap 2363115 AGACAGACTTAAAAA GGCAGGAGC ACATCA GC-CCTGCC TTTTATTATTTTATA ribC 2363803 - 2363153 - | riboflavin synthase subunit alpha TERM 2645 2364050 - 2364038 - H 72 -6.3 -4.37886 | opp_overlap 2364022 TTATCGGTTACAAAA CGATA AAT TATCG CTACTGAAATTATAA TERM 2646 2364684 - 2364715 + G 71 -6.5 -4.22375 | overlap 2364671 TGCTCCGGCATTAGG CGGTGTCGGTTGC GGGGTG GCAACCGGAACGG TTTATTGGGTGATGT TERM 2647 2365463 - 2365452 - g 72 -5.8 -4.36914 | opp_overlap 2365447 2365452 CCGCTGGTTACAAAA GCAG CCAT CTGC TTTTATTTTGCAAAA TERM 2648 2365452 - 2365463 + G 85 -5.8 -5.07652 | opp_overlap 2365452, overlap 2365447 CCGCTGGTTACAAAA GCAG CCAT CTGC TTTTATTTTGCAAAA YE2163 2364118 - 2365491 + | multidrug efflux protein TERM 2649 2366869 - 2366854 - g 71 -4.6 -4.62069 | opp_overlap 2366854 2366852, overlap 2366856 CTGTCATGGCAAAAA CTGGCT TGAA AGCCGG TATCTTGTTGGACAC pykF 2366685 - 2368097 + | pyruvate kinase TERM 2650 2368123 - 2368154 + F 100 -11.7 -4.56775 | opp_overlap 2368116 2368129, overlap 2368129 CGACTAAACGCTAAT TAAAAACGCCGCT TTCAAT AGCGGCGTTTTTC TTTTTGAGCACCGCT TERM 2651 2368148 - 2368129 - f 100 -10.7 -4.87893 | opp_overlap 2368129 2368123, overlap 2368116 AACGCTAATTAAAAA CGCCGCT TTCAAT AGCGGCG TTTTTCTTTTTGAGC TERM 2652 2368129 - 2368148 + F 100 -10.7 -5.61881 | opp_overlap 2368116 2368129, overlap 2368123 AACGCTAATTAAAAA CGCCGCT TTCAAT AGCGGCG TTTTTCTTTTTGAGC lpp 2368417 - 2368653 + | major outer membrane lipoprotein TERM 2653 2368675 - 2368693 + T 100 -14.6 -5.47218 | opp_overlap 2368675 TTCCTGAATGAAAAA TGGCGCAC ATT GTGCGCCA TTTTTTTGCCTCGCA TERM 2654 2368693 - 2368675 - T 100 -14.6 -4.8622 | opp_overlap 2368675 TTCCTGAATGAAAAA TGGCGCAC ATT GTGCGCCA TTTTTTTGCCTCGCA TERM 2655 2368839 - 2368806 - T 100 -13.3 -5.1287 | opp_overlap 2368804 CCGATACGCAAAAAA TTAGCCACGGCAA AATGATAA CTGCCGTGGCTAA GATACGTTAAGTCTT YE2166 2369952 - 2368885 - | hypothetical protein TERM 2656 2369780 - 2369765 - G 75 -7.6 -4.1711 | AGCATTCCCAACAAA CCGATT TTAT AATCGG CAGCAATAGCCTCCA YE2167 2370641 - 2370219 - | cysteine desufuration protein SufE TERM 2657 2370686 - 2370661 - R 76 -10.3 -2.94232 | opp_overlap 2370661 2370667, overlap 2370660 TGCTTCCTAAATAAT CCCCCGCGTCC TTGA AGCCGCAGGGG TGTTAGCTACGCTCA YE2168 2371954 - 2370803 - | selenocysteine lyase YE2169 2373216 - 2372050 - | cysteine desulfurase activator complex subunit SufD sufC 2374102 - 2373356 - | cysteine desulfurase ATPase component TERM 2658 2373708 - 2373720 + g 80 -6.3 -4.68724 | AAGTCTGCTGGCATT TTGAG TAA CTCAA TTTTCTCTTCGATAA YE2171 2375670 - 2374159 - | cysteine desulfurase activator complex subunit SufB TERM 2659 2374315 - 2374328 + g 75 -5.3 -4.6902 | opp_overlap 2374315 CAAGCAATAAAACAG TTGGT CATC ACCAA TTTTTGAGGTTGTCG sufA 2376056 - 2375685 - | iron-sulfur cluster assembly scaffold protein TERM 2660 2375911 - 2375899 - G 74 -6.9 -4.43879 | opp_overlap 2375898 2375899 ATCACGTAAGCAAAA CCGGC ACA ACCGG ATTGCTTGACCCCCA TERM 2661 2376414 - 2376402 - R 91 -10.5 -4.14511 | AACTTTAGCTGAAAA CCCCC TCA GGGGG AACCTATCAGAGAGA TERM 2662 2376686 - 2376735 + r 71 -4.5 -4.58283 | gap 1, opp_overlap 2376690 2376693 2376695, overlap 2376690 2376691 2376693 AGAAAGATGTGGTCA TGAATG-ATATTGCTCAAGGCCCA CAA TTGGCGCTGAGCAATATATATTTA TTTTTAGAGAGGTTA TERM 2663 2376693 - 2376727 + r 73 -8.6 -3.59874 | opp_overlap 2376693 2376690 2376695, overlap 2376691 2376690 2376686 TGTGGTCATGAATGA TATTGCTCAAGGCCCA CAA TTGGCGCTGAGCAATA TATATTTATTTTTAG TERM 2664 2376727 - 2376693 - R 77 -10.8 -2.77899 | opp_overlap 2376691 2376690 2376686 2376693, overlap 2376690 2376695 TGTGGTCATGAATGA TATTGCTCAAGGCCCA CAA TTGGCGCTGAGCAATA TATATTTATTTTTAG YE2173 2377170 - 2376748 - | hypothetical protein YE2174 2380401 - 2377345 - | hypothetical protein TERM 2665 2378810 - 2378826 + g 73 -5.1 -4.52589 | opp_overlap 2378822 GGGTTCAGTCGATTA TCGGGAT CAA ATGCCGA TTTTATCTGGCGCAA TERM 2666 2380384 - 2380352 - G 80 -4.8 -5.13521 | AAAGCATCCAAAAAA TCCAGCACCAACTG AATAA CACCTGGCGCTTGA GAAATCTGTGGGATC YE2175 2380848 - 2381951 + | putative inner membrane protein TERM 2667 2381983 - 2381959 - T 95 -11.5 -3.81755 | opp_overlap 2381959 AGCTTTGAAATAGAA TAGGGGTTATG CTG CCTAACCCCTA TTATTCAGCAACATC TERM 2668 2381959 - 2381983 + T 90 -11.5 -3.61715 | opp_overlap 2381959 AGCTTTGAAATAGAA TAGGGGTTATG CTG CCTAACCCCTA TTATTCAGCAACATC TERM 2669 2382284 - 2382303 + T 100 -7.1 -6.41881 | CTGTGTGTAGTCTTT GCCTGTC ACCTAA GACGGGC TTTTTTTTTATTATA TERM 2670 2382429 - 2382410 - T 100 -10 -5.47914 | overlap 2382400 AAAAAGGATAAAAAA TCCGCAAC CTAA GCTGCGGA TGATAAATATATTGG pps 2384893 - 2382512 - | phosphoenolpyruvate synthase TERM 2671 2385236 - 2385246 + G 80 -8.2 -4.41241 | overlap 2385210 CACTGCCGAAGTGCT CGGC CAT GCCG TTTTATCGCAATTTC YE2177 2385180 - 2386001 + | hypothetical protein TERM 2672 2386343 - 2386329 - g 73 -10 -3.28791 | AGCTGTTGCTGATAA CGTGAC AGC GTCACG TAAACGAATTGAAAA aroH 2386228 - 2387277 + | phospho-2-dehydro-3-deoxyheptonate aldolase YE2179 2387460 - 2387606 + | hypothetical protein hemR2 2387828 - 2389858 + | hemin storage receptor protein TERM 2673 2390066 - 2390052 - g 76 -8.6 -3.99062 | AAGATTTAGCACAAA CACTGA ATA TCAGTG AGGCAGAATTGGCGT hemS2 2389973 - 2391034 + | hemin transport protein TERM 2674 2391020 - 2391048 + F 74 -9.5 -3.36128 | opp_overlap 2391017 TTGACCCCAATAGGC GTGCCGCATGC ATAAATG GCGCGCGGCAC TTAGATTTATCATTT hmuT2 2391027 - 2391860 + | hemin-binding periplasmic protein YE2183 2393419 - 2391920 - | hypothetical protein lplA 2394435 - 2393419 - | lipoate-protein ligase A TERM 2675 2394649 - 2394670 + r 84 -11.7 -3.15544 | opp_overlap 2394630, overlap 2394653 TGCTAGCCCGTAGGG TGAACCTCA AGCA TGAGGTTCA TTAATCCCGATGAGC nlpC 2395468 - 2395004 - | putative lipoprotein TERM 2676 2395301 - 2395287 - G 76 -8.6 -3.97401 | ACAAAACCAGAACAA TCAACG CCA CGTTGA TCCAGCCCCCCATTC YE2186 2396116 - 2395730 - | hypothetical protein YE2187 2396457 - 2396113 - | hypothetical protein TERM 2677 2396214 - 2396203 - G 83 -4.4 -5.44119 | overlap 2396204 CTCACCGTAAAAAAA TTGG GCAG CCAA GGTGACCAGCACAAA arnT 2398118 - 2396454 - | 4-amino-4-deoxy-L-arabinose transferase TERM 2678 2397919 - 2397929 + g 71 -4.6 -4.61231 | TTATTAAACCAATAT CCCG CGA TGGG TTTTTCAAAATATCG YE2189 2399020 - 2398118 - | hypothetical protein TERM 2679 2398884 - 2398867 - G 78 -9.1 -4.10429 | AACGAGGCCGGAAAA GACGCCA TAAA TGGCGCC CCATATTGTCCGGCC YE2190 2401080 - 2399017 - | bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase TERM 2680 2400951 - 2400929 - G 82 -10.6 -3.84719 | ACGGGTAAATCTAAA TCCGCAGCCA CTC TGGCTACAGA AGAGAAAAAGCGATT pmrF 2402060 - 2401077 - | undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase TERM 2681 2401818 - 2401800 - G 74 -11 -3.06915 | opp_overlap 2401811, overlap 2401811 ACTGACCTGATTGAA TCCGGCCA TAA TGGCCGAA TGCTGGCCATAATTA YE2192 2403201 - 2402053 - | UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase btuD 2404309 - 2403548 - | vitamin B12-transporter ATPase btuE 2404885 - 2404331 - | putative glutathione peroxidase btuC 2405962 - 2404955 - | vtamin B12-transporter permease TERM 2682 2406072 - 2406130 + r 71 -6.9 -4.15222 | gap 1, opp_overlap 2406075, overlap 2406075 2406079 TTTGTATGAAAAATA TGATTTTTAACGCTAGCGTTGTCCGCTG ACTA TAGT-GACAACGCTAGCGCTATCGATTA TTTCTTAACCACGAT TERM 2683 2406079 - 2406123 + r 95 -13.8 -2.75986 | gap 1, opp_overlap 2406075, overlap 2406075 2406072 GAAAAATATGATTTT TAACGCTAGCGTTGTCCGCTG ACTA TAGT-GACAACGCTAGCGCTA TCGATTATTTCTTAA YE2196 2406629 - 2406135 - | hypothetical protein TERM 2684 2406805 - 2406815 + r 73 -5.4 -4.68724 | CTTAACATACATCTG GCAA TAG TTGC TTTTATATTGAATAA TERM 2685 2407409 - 2407387 - R 88 -9.9 -4.11862 | gap 1, opp_overlap 2407385, overlap 2407389 ATATAAAACATGAAA CA-GAGGGGG TTGC CCCCCTCCTG AGGTTATTGACAAAG TERM 2686 2407406 - 2407389 - R 100 -12.7 -3.63315 | opp_overlap 2407385, overlap 2407387 ATAAAACATGAAACA GAGGGGG TTGC CCCCCTC CTGAGGTTATTGACA TERM 2687 2407486 - 2407512 + r 74 -7.9 -3.9749 | gap 1, overlap 2407485 CCTCCCTGGGGGCTC GAG-CCGCGCCG TCCC TGGCGCGGACGC TTTACTCTTCTACCT cysB 2408676 - 2407702 - | transcriptional regulator CysB TERM 2688 2408719 - 2408699 - R 80 -9.7 -3.60627 | opp_overlap 2408701, overlap 2408701 CCATCCTAGGTTAAA CACTGTGGG AGA CCCACAGTT TGGTACATCGGAATC TERM 2689 2408717 - 2408701 - R 95 -12.3 -3.38224 | opp_overlap 2408701, overlap 2408699 ATCCTAGGTTAAACA CTGTGGG AGA CCCACAG TTTGGTACATCGGAA TERM 2690 2408701 - 2408717 + r 100 -12.3 -3.76224 | opp_overlap 2408699 2408701 ATCCTAGGTTAAACA CTGTGGG AGA CCCACAG TTTGGTACATCGGAA TERM 2691 2409124 - 2409140 + r 88 -9.4 -4.26188 | opp_overlap 2409124 GCCCAATAAAAAAAA CCAGCC ATTAA GGCTGG TTTTACATGTATAAC TERM 2692 2409140 - 2409124 - R 100 -9.4 -6.09888 | opp_overlap 2409124 GCCCAATAAAAAAAA CCAGCC ATTAA GGCTGG TTTTACATGTATAAC supX 2411851 - 2409236 - | DNA topoisomerase I TERM 2693 2411241 - 2411276 + g 83 -8.2 -4.56775 | AAACGTACCGCGACC GATTGTACGCGCCCAG CGGA CAGGCCACGTGCAATC TTTTTCCACAACAGT TERM 2694 2411874 - 2411888 + H 80 -5 -5.09762 | overlap 2411875 TTTACCTAAATTATT TCTTCT AAA AGAAGG TTTTTATCTTGCCGT TERM 2695 2411947 - 2411961 + H 80 -2.8 -5.52384 | ATTGCGGTACTTTTT CAGG AGATCAA CCTG TTTTTTTGATCGGAG YE2201 2412292 - 2412543 + | hypothetical protein TERM 2696 2412613 - 2412597 - T 70 -5.1 -4.53777 | TTGAACCAAAAATAA CAGGG GGCCAAG CCCTG AGGGATCCCCACAAA tpn1330 2413829 - 2412636 - | transposase for IS1330 TERM 2697 2412746 - 2412713 - G 74 -11.1 -3.02144 | opp_overlap 2412721 2412724 CTATTCGTCGCAATA TTAGCGGAGAGTGTC TTAA GACATTCTCTGCTAA CGTCAGATAAGATAT sohB 2415003 - 2413957 - | putative periplasmic protease TERM 2698 2415249 - 2415261 + G 82 -10.5 -3.82083 | CAGGTGATGGCATTG GCCGC GAA GCGGC TTTGACTTATGCTCG YE2204 2415176 - 2415937 + | short chain dehydrogenase btuR 2415949 - 2416539 + | cob(I)yrinic acid a,c-diamide adenosyltransferase TERM 2699 2416602 - 2416581 - T 100 -11.7 -4.96996 | CTCAAAGAAAAGAAA GGGAAGAAA ATGA TTTCTTCCC ATAAATAACCTACTT YE2206 2417545 - 2416616 - | 23S rRNA pseudouridylate synthase B TERM 2700 2417895 - 2417919 + r 71 -8.5 -3.48276 | AACAATGACTTATAT CGCCAATCCAT TTA ACGGAATGGCG TTGTATCCCCGGCAC YE2207 2418526 - 2417906 - | hypothetical protein trpH 2419343 - 2418555 - | hypothetical protein TERM 2701 2419875 - 2419889 + H 100 -11.4 -5.65177 | TGCAGATTGCTTCAG CCCGCT AAT AGCGGG TTTTTTTATGAATGT TERM 2702 2420527 - 2420508 - g 73 -7.8 -4.07568 | CGCCGGTTTTGAAAA CTTGCCGC AGTT GCGCCAAG ACCAACGTTGTCCGG trpE 2420029 - 2421591 + | anthranilate synthase component I trpG 2421606 - 2422196 + | anthranilate synthase component II TERM 2703 2423099 - 2423081 - g 73 -5.2 -4.65916 | opp_overlap 2423081 CGCACCTGAAGAAAA CCGTGACA TTT TAGCACGG TTGTTACAAGGTAAG trpD 2422314 - 2423273 + | anthranilate phosphoribosyltransferase TERM 2704 2424029 - 2424051 + G 74 -11.2 -3.08996 | overlap 2424032 GTCTGAAACTGACCT GAATGCGGCG GTG CGCCGCGTGC TATTGGGTGAAAATA TERM 2705 2424032 - 2424048 + G 76 -11.5 -2.75992 | overlap 2424029 TGAAACTGACCTGAA TGCGGCG GTG CGCCGCG TGCTATTGGGTGAAA TERM 2706 2424340 - 2424368 + G 70 -9.6 -3.1355 | opp_overlap 2424339 AACTGCGCGAAGTAT TGCCTGCCAGTT GCCAG ATTTGGCAGGCA TTGAGTGTCACTGAC trpC 2423319 - 2424653 + | bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase TERM 2707 2424947 - 2424973 + G 75 -8.1 -4.1552 | TAGTGCACAACTGGA TCCTGAATTTC AGGCG GAATTTCAGGA TTTGTTAAAAAACTA trpB 2424837 - 2426027 + | tryptophan synthase subunit beta trpA 2426027 - 2426833 + | tryptophan synthase subunit alpha YE2215 2427095 - 2427409 + | putative lipoprotein ompW 2428343 - 2427708 - | outer membrane protein W TERM 2708 2428078 - 2428088 + g 73 -8.2 -3.79419 | overlap 2428076 GCGATGTCACCGGTC GGCC CAA GGCC TATTTTATGACGGAA TERM 2709 2428237 - 2428216 - G 71 -10.2 -2.77036 | overlap 2428211 TAACCTAATACATCA TCAGACCC GGCATT GGGTCTGA CCGTTGCCGTCCCTG TERM 2710 2428350 - 2428397 + H 93 -12.4 -3.21747 | gap 1, opp_overlap 2428382, overlap 2428352 2428352 TTTTTTCATTATCCA TTC-CATTTGTGGGTATATTC GCGGACA GAATATACCCACAAATGAGTA TTCATGATCCAATCG TERM 2711 2428352 - 2428395 + H 100 -15 -3.17229 | gap 1, opp_overlap 2428382, overlap 2428350 2428352 TTTTCATTATCCATT C-CATTTGTGGGTATATTC GCGGACA GAATATACCCACAAATGAG TATTCATGATCCAAT TERM 2712 2428352 - 2428394 + H 100 -15.2 -2.50016 | opp_overlap 2428382, overlap 2428352 2428350 TTTTCATTATCCATT CCATTTGTGGGTATATTC GCGGACA GAATATACCCACAAATGA GTATTCATGATCCAA TERM 2713 2428560 - 2428548 - H 77 -6.3 -4.58663 | ACCATTGCTGAAAAA GACAA CAG TTGTC ATGCTGCTATGCTTG YE2216A 2428604 - 2429047 + | hypothetical protein YE2218 2429099 - 2429866 + | hypothetical protein TERM 2714 2429911 - 2429887 - T 70 -9.3 -2.83249 | opp_overlap 2429892, overlap 2429892 CGTTAGATAACATGA CAAAAGGGCCA TTA CGGCCCTTTTT GTTATTCCGGATTCA TERM 2715 2429892 - 2429906 + T 100 -8.5 -5.29445 | opp_overlap 2429887 2429892 GATAACATGACAAAA GGGCC ATTAC GGCCC TTTTTGTTATTCCGG TERM 2716 2429906 - 2429892 - T 95 -9.2 -4.56629 | opp_overlap 2429892, overlap 2429887 GATAACATGACAAAA GGGCCA TTA CGGCCC TTTTTGTTATTCCGG YE2219 2431667 - 2429913 - | putative sulfate permease TERM 2717 2432057 - 2432046 - g 80 -4.4 -5.31456 | opp_overlap 2432052 GCAAGGTAGAAAAAA TGAC CCTG GTCA CCGCCATTATGGTGT ispA 2431898 - 2432440 + | intracellular septation protein A YE2221 2432556 - 2432930 + | putative acyl-CoA thioester hydrolase TERM 2718 2432961 - 2432981 + T 100 -12.6 -5.06816 | opp_overlap 2432961 TGTCAGATGTCAAAA GGGTCGCT CCAGC AGCGACCC TTTTTATTGCAACGT TERM 2719 2432981 - 2432961 - T 100 -12.6 -4.16943 | opp_overlap 2432961 TGTCAGATGTCAAAA GGGTCGCT CCAGC AGCGACCC TTTTTATTGCAACGT tonB 2433787 - 2433026 - | transport protein TonB YE2223 2434095 - 2434391 + | YciI-like protein TERM 2720 2434563 - 2434544 - T 86 -12.2 -2.94144 | opp_overlap 2434544 2434540, overlap 2434541 2434546 TTGCGATGGAAATCA TACGCCTG CCAT CAGGCGTA TTGGCTTTAACGTAC TERM 2721 2434544 - 2434563 + T 89 -12.2 -3.28497 | opp_overlap 2434541 2434544 2434546, overlap 2434540 TTGCGATGGAAATCA TACGCCTG CCAT CAGGCGTA TTGGCTTTAACGTAC TERM 2722 2434561 - 2434546 - T 76 -10.4 -3.02324 | opp_overlap 2434544 2434540, overlap 2434544 2434541 GCGATGGAAATCATA CGCCTG CCAT CAGGCG TATTGGCTTTAACGT YE2224 2434856 - 2434593 - | hypothetical protein TERM 2723 2434928 - 2434914 - R 71 -8.6 -3.55219 | AACCGCATCATATAA CTGTGA TAT TCACAG CAAAAGCTTATCTAA YE2225 2435730 - 2435008 - | hypothetical protein TERM 2724 2435765 - 2435789 + H 100 -8.8 -5.66229 | opp_overlap 2435762 2435773 2435783 ATTAGAACAGCAGTA TTGATCAATT GATAA AATTGATCAA TTTTTTATTATTGAT TERM 2725 2435882 - 2435905 + H 80 -9.8 -3.69395 | opp_overlap 2435882 2435886, overlap 2435886 2435900 TATGAAAGTATCAAA TAAACATGAT GGTT ATCATGTTTA TTATTCAATAATCAC TERM 2726 2435905 - 2435882 - H 84 -9.8 -3.90082 | opp_overlap 2435882 2435886 2435900, overlap 2435886 TATGAAAGTATCAAA TAAACATGAT GGTT ATCATGTTTA TTATTCAATAATCAC TERM 2727 2435886 - 2435901 + H 74 -6.2 -4.46854 | opp_overlap 2435882 2435886, overlap 2435882 2435900 AAAGTATCAAATAAA CATGAT GGTT ATCATG TTTATTATTCAATAA TERM 2728 2435901 - 2435886 - H 74 -6.2 -4.54253 | opp_overlap 2435886 2435882 2435900, overlap 2435882 AAAGTATCAAATAAA CATGAT GGTT ATCATG TTTATTATTCAATAA TERM 2729 2436322 - 2436292 - H 100 -9.9 -4.56597 | opp_overlap 2436298, overlap 2436298 TTGCTGGGGCAAAAA CAAAAACAGCCTC ATAAA GAGACTGTTTTTA CAACCCTCACAGCGA TERM 2730 2436316 - 2436298 - H 100 -6.7 -5.61881 | opp_overlap 2436298, overlap 2436292 GGGCAAAAACAAAAA CAGCCTC ATAAA GAGACTG TTTTTACAACCCTCA cls 2436800 - 2438260 + | cardiolipin synthetase YE2228 2438395 - 2438718 + | dsDNA-mimic protein TERM 2731 2438748 - 2438769 + T 83 -9.5 -3.94409 | overlap 2438730 2438751 GCTGCTTAGCTTAGG CAGCAGCTT GATC AAGCTGTTG TTTGTCGCTCGTGTA TERM 2732 2438751 - 2438766 + T 76 -7.6 -4.09519 | overlap 2438730 2438748 GCTTAGCTTAGGCAG CAGCTT GATC AAGCTG TTGTTTGTCGCTCGT TERM 2733 2438802 - 2438826 + T 100 -8.6 -4.8048 | gap 1, opp_overlap 2438802 ATACCCAATAAAAAA TCCCCGCT-GA TTTA TCTGGCGGGGA TTTTTGCTATCAGAC TERM 2734 2438826 - 2438802 - T 91 -6.4 -5.49234 | gap 1, opp_overlap 2438802 ATACCCAATAAAAAA TCCCCG-CTGA TTTA TCTGGCGGGGA TTTTTGCTATCAGAC oppF 2439865 - 2438864 - | oligopeptide transport ATP-binding protein TERM 2735 2438903 - 2438893 - G 77 -8.2 -4.20516 | CTTTCAGGCAAGAAA CCGC ATG GCGG AAGCTCCCCTCCAAT TERM 2736 2438909 - 2438928 + g 73 -5.6 -4.59109 | opp_overlap 2438922 CGCATGGCGGAAGCT CCCCTCCA ATAA TGGGCGGG TTTTTGCACACTCTG oppD 2440863 - 2439862 - | oligopeptide transporter ATP-binding component TERM 2737 2439926 - 2439944 + g 71 -8.8 -3.77219 | opp_overlap 2439918, overlap 2439928 CCAAAATGCTCTAAT GCTGGAGC GGT GCTACAGC TTTCCATTGCATACT oppC 2441780 - 2440875 - | oligopeptide transport system permease protein oppB 2442719 - 2441799 - | oligopeptide transporter permease TERM 2738 2442553 - 2442574 + g 73 -9.5 -3.3879 | overlap 2442551 TTATAAACTGGGTCA TTGAGGTGA TATT TCGCCTCAA TATTTGCCATCACTT TERM 2739 2442769 - 2442795 + r 71 -8.6 -3.53531 | opp_overlap 2442769 ATTTCAAAGCAAAAA GGGCAGCCCATG ACT TACCGGCTGCCC TTATAATATTAGTGC TERM 2740 2442795 - 2442769 - R 100 -10.1 -4.99134 | opp_overlap 2442769 ATTTCAAAGCAAAAA GGGCAGCCCAT GACTT ACCGGCTGCCC TTATAATATTAGTGC oppA 2444441 - 2442804 - | periplasmic oligopeptide-binding protein precursor TERM 2741 2443498 - 2443514 + g 74 -4.4 -5.00339 | GCTTCACGGACACGG GCATCA GTGAA TGGTGC TTTTTGGTTGTTGAT oppA2 2446385 - 2444670 - | periplasmic oligopeptide-binding protein precursor TERM 2742 2445095 - 2445110 + g 71 -4 -4.75288 | GCCACATGGATGCTG CAGCAA TAGC TTGTTG TTTATTTTGATCTGA TERM 2743 2445367 - 2445383 + g 71 -2.9 -5.00339 | overlap 2445351 GCTGTTCTGACCCTT GCGTC AGTGAAC GGCGC TTTTTCATTATTAAT TERM 2744 2446445 - 2446432 - R 75 -3.1 -5.08824 | GTTTTATTGAAAAAA CAAGA AATC TCTCG CTATGGAGTTGTCCG TERM 2745 2446996 - 2446972 - R 100 -8.6 -5.24416 | gap 1, overlap 2446988 TAATGACAAGAAAAA GGCCAC-CGGT AATA ACCAAGTGGCC TGAGGTTAATGTCAA TERM 2746 2447075 - 2447101 + r 74 -7.9 -3.97088 | gap 1, overlap 2447074 CTTCCCTGGGGGCTC GAG-CCGCGCCG TCCA TGGCGCGGACGC TTTACTCTTCTGCCA YE2237 2447882 - 2447238 - | hypothetical protein TERM 2747 2447740 - 2447714 - G 71 -4.5 -4.51196 | gap 1, opp_overlap 2447717, overlap 2447718 GCGAAATCCATAAAA TAATTGCC-ACC GACA GGTTGGCAGTTA GGTTGGTTTTATCCC TERM 2748 2449061 - 2449027 - g 74 -6.5 -4.33621 | gap 2 GACGCAACCAATAAA GCCGCAGATATCGTGCT TCA AGC-CGCTATC-GCAGC AGGTGCGCCAGCCGA adhE 2448583 - 2451258 + | bifunctional acetaldehyde-CoA/alcohol dehydrogenase TERM 2749 2451334 - 2451315 - Tf 81 -9.2 -3.76582 | opp_overlap 2451315 TAACAGAAGATATAA CCCCCGAC AATC GTTGGGGG TTTCTTTTTATGGCT TERM 2750 2451315 - 2451334 + TF 100 -11.4 -4.97405 | opp_overlap 2451315 TAACAGAAGATATAA CCCCCGAC AATC GTTGGGGG TTTCTTTTTATGGCT tdk 2452357 - 2451758 - | thymidine kinase YE2240 2452327 - 2452599 + | hypothetical protein TERM 2751 2452842 - 2452865 + FH 71 -9.8 -2.65884 | opp_overlap 2452840, overlap 2452841 GAGAAGTAAGGTATT TTTGCTTTAT TGAT ATAAAGCAAA CTTATAACTTAGTGA TERM 2752 2453390 - 2453380 - g 77 -6.8 -4.58773 | GCTACTAAATCAAAA CGTG CTG CACG CCCTGCTAAATATAA TERM 2753 2453449 - 2453435 - g 75 -5.7 -4.55128 | ATGGCGAAACTAAAA CTTGG ACCGG CCAAG GCCGTACTCCAGCAG bglY 2453110 - 2453520 + | global DNA-binding transcriptional dual regulator H-NS TERM 2754 2453576 - 2453553 - T 74 -4.6 -4.84359 | gap 1, opp_overlap 2453553 2453556 CTATTGTGATAAAAA TACCCTCCTAT GAT ATGGG-GGGTA TTTTTTTGTTCTCTT TERM 2755 2453553 - 2453576 + T 100 -6.8 -5.94214 | gap 1, opp_overlap 2453553, overlap 2453556 CTATTGTGATAAAAA TACCCTCCTAT GAT AT-GGGGGGTA TTTTTTTGTTCTCTT TERM 2756 2453556 - 2453574 + T 81 -7.4 -4.57921 | opp_overlap 2453553, overlap 2453553 TTGTGATAAAAATAC CCTCCTAT GAT ATGGGGGG TATTTTTTTGTTCTC YE2242 2455252 - 2453903 - | putative nucleotide sugar dehydrogenase YE2243 2456590 - 2455574 - | response regulator of RpoS YE2244 2457594 - 2456692 - | hypothetical protein TERM 2757 2457383 - 2457371 - G 71 -4.1 -4.72272 | overlap 2457381 CGCCGCCACGAAAAA TCCAT CAA ACGGA TAACATCCCAGTATT YE2245 2457914 - 2458324 + | hypothetical protein TERM 2758 2458428 - 2458408 - f 86 -9 -4.29176 | opp_overlap 2458408 AGATGGAATGCAAAA TAGCCGCC CTGAT GGCAGCTA TTTAGAATAAATATC TERM 2759 2458640 - 2458650 + F 78 -5.4 -5.03145 | opp_overlap 2458640 GTTAAAAGTACCAAA TGAG ACG CTCA TTTTTTCGAACATTG TERM 2760 2458778 - 2458795 + F 78 -7.1 -4.44608 | GCCGGTCAAGTATTT TTGTGAT GCAC ATCACAA TTCTTTTTAACTGCC YE2246 2458963 - 2459427 + | hypothetical protein TERM 2761 2459546 - 2459536 - g 100 -6.8 -6.08563 | opp_overlap 2459536 2459534 AATATACAAAAAAAA GTGC TCC GCAC TATTTGCCCTGACGC TERM 2762 2460294 - 2460322 + G 76 -2.3 -5.28942 | opp_overlap 2460284, overlap 2460288 2460295 AAATGTACTGAGCCG TGCGCTGTATCGA GTA TTAGCACAGCGCG TTTTTGTTTACGGTA purU 2459509 - 2460357 + | formyltetrahydrofolate deformylase YE2253 2462306 - 2461446 - | LysR family transcriptional regulator TERM 2763 2461507 - 2461520 + g 71 -3.9 -4.77698 | GAATGTGATCTTGAT TTGTA GAAA TACAA TTTATTTTCATCTTG TERM 2764 2462362 - 2462351 - H 75 -2.2 -5.33785 | AATTATCAGAAAAAA GACA AGCA TGCC TACGTATATAATGCC TERM 2765 2463178 - 2463164 - g 74 -10 -3.4691 | opp_overlap 2463158, overlap 2463158 2463155 ATCGAACAACATCAA CCCGAT GTT ATCGGG CTTCAAGAAACGAAA xth 2463086 - 2463892 + | exonuclease III nudG 2463976 - 2464362 + | pyrimidine (deoxy)nucleoside triphosphate pyrophosphohydrolase YE2256 2464657 - 2464367 - | hypothetical protein topB 2466582 - 2464654 - | DNA topoisomerase III TERM 2766 2464926 - 2464947 + g 74 -4.3 -5.00616 | overlap 2464943 ATGCTCTTCCTGCTG GGCTGGCAT GGAT GTACCGGCC TTTTTTAAACAAAAA TERM 2767 2464943 - 2464968 + g 71 -9.1 -3.55761 | overlap 2464926 CTGGCATGGATGTAC CGGCCTTTTTT AAAC AAAAAAGTCCG TTTAAACAATAACTC fdhB 2467672 - 2466626 - | selenophosphate synthetase TERM 2768 2467501 - 2467469 - G 79 -3.3 -5.252 | overlap 2467471 GATCGGCATAAAAAA GTCGGTGGTGCTGAT AAT ACCAACACCATTGCC AATATCATAAACAGC YE2259 2468553 - 2468002 - | hypothetical protein sppA 2468716 - 2470566 + | protease 4 TERM 2769 2470723 - 2470740 + F 100 -14.1 -5.52384 | opp_overlap 2470720 GTCGATAAATACTCT GCCCGGC ACCT GCCGGGC TTTTTTTCCTCGCCA ansA 2470810 - 2471826 + | cytoplasmic asparaginase I nam 2471842 - 2472495 + | nicotinamidase/pyrazinamidase TERM 2770 2472516 - 2472535 + T 100 -10.7 -4.64844 | opp_overlap 2472516 2472509 TAAGATAAGCATCAA CGGAGCC TCATCT GGCTCCG TTTTCTCTGTATCCG TERM 2771 2472535 - 2472516 - T 81 -10.7 -3.33003 | opp_overlap 2472516, overlap 2472509 TAAGATAAGCATCAA CGGAGCC TCATCT GGCTCCG TTTTCTCTGTATCCG YE2263 2472842 - 2472570 - | hypothetical protein YE2264 2473329 - 2472916 - | methionine sulfoxide reductase B TERM 2772 2473187 - 2473173 - G 71 -2.7 -4.9725 | opp_overlap 2473176, overlap 2473175 ACTCTGAGATAAAAA GCGGC TGGTG GCAGC ACAAGCATTGGTATA TERM 2773 2473409 - 2473391 - H 82 -2.4 -5.70522 | AATAATAACAAAAAA TTAACAAC AAA GCAGTTAA AATTGTCCTAAACTG TERM 2774 2473704 - 2473722 + G 71 -6.6 -4.22883 | GTAGGTATCAACGGT TTCGGCCG TAT CGGTCGCA TTGTTTTCCGTGCTG gapA 2473668 - 2474672 + | glyceraldehyde 3-phosphate dehydrogenase A TERM 2775 2474698 - 2474713 + T 100 -6.1 -5.85244 | opp_overlap 2474698 TAGATTTCTGCCAAA GCCAC CTCCGA GTGGC TTTTTTATTTTGATT TERM 2776 2474794 - 2474809 + T 78 -6 -4.87803 | opp_overlap 2474793 ACATTGAGATAAACG GCCCCG CTTG CGAGGC TTTTCTTTGGGCATA TERM 2777 2474846 - 2474831 - T 100 -6.1 -5.60993 | opp_overlap 2474830 TTGGGCATAAAAAAA CCAGC ACGGAA GCTGG CTTAGGTATTTTGGA YE2266 2475159 - 2474848 - | hypothetical protein YE2267 2475458 - 2475249 - | hypothetical protein YE2268 2475749 - 2475540 - | hypothetical protein TERM 2778 2475613 - 2475627 + g 73 -2.1 -5.08824 | CTTTGTTTTTCTTCC CATTC TGACC GGATG TTTTTTAAATGGAAA TERM 2779 2476730 - 2476758 + G 79 -9.5 -3.94 | opp_overlap 2476721 TTAGAATCACACGGT GAGTACGAGGCAG TTG CTGCCTTGCACAC TTATTTCCAGATTGG YE2269 2476274 - 2477152 + | hypothetical protein TERM 2780 2477199 - 2477171 - f 71 -9.6 -2.90763 | opp_overlap 2477177, overlap 2477177 CTGATATTGCAGACA CAAAAATGGGGC ACAAA GCCCCATTTCAG GTTAATGACAAAGTG TERM 2781 2477177 - 2477193 + F 78 -9.4 -3.67976 | opp_overlap 2477177 2477171 TTGCAGACACAAAAA TGGGGC ACAAA GCCCCA TTTCAGGTTAATGAC TERM 2782 2477193 - 2477177 - f 100 -9.4 -5.03994 | opp_overlap 2477177, overlap 2477171 TTGCAGACACAAAAA TGGGGC ACAAA GCCCCA TTTCAGGTTAATGAC TERM 2783 2477274 - 2477300 + F 74 -7.9 -3.9749 | gap 1, overlap 2477273 CCTCCCTGGGGGCTC GAG-CCGCGCCG TCCC TGGCGCGGACGC TTTACTCTTCTGCCT TERM 2784 2478543 - 2478576 + G 74 -11.1 -3.02144 | opp_overlap 2478551 2478554 ATATCTTATCTGACG TTAGCAGAGAATGTC TTAA GACACTCTCCGCTAA TATTGCGACGAATAG tpn1330 2477460 - 2478653 + | transposase for IS1330 YE2271 2479495 - 2478725 - | hypothetical protein TERM 2785 2481691 - 2481667 - g 73 -3.5 -4.89729 | GAGAAAATTGAAAAA CCTGCGGGT ATCAGCA ACCCGAAAG ACTTCCGTAATGAAA YE2272 2480041 - 2481975 + | hypothetical protein YE2273 2482087 - 2483364 + | hypothetical protein TERM 2786 2483376 - 2483414 + F 100 -8.8 -4.7373 | opp_overlap 2483373 2483376 TTAACTTCCAAACTA GCCGGTCATCTTTTTCTG CCA CAGAAATAGCTTTCCGGC TTTTTAATGCGCTAA TERM 2787 2483876 - 2483890 + G 83 -10 -4.14243 | GCATGATAGTTATTG TAGCGG GTG CCGCTA TTTTGAGCTGGCCTG YE2274 2483467 - 2484516 + | hypothetical protein YE2275 2484711 - 2485157 + | hypothetical protein YE2276 2486075 - 2485170 - | LysR family transcriptional regulator TERM 2788 2486662 - 2486647 - g 81 -3.2 -5.42198 | CGGCAAAAAATAAAA TGACCG CACC CGGTTA TCAGGCGATTCGCAG TERM 2789 2486766 - 2486756 - g 77 -6.8 -4.57569 | opp_overlap 2486755 TTATGCTGGGAAAAA TGGC CCC GCCA ATACATTCTCACCGC YE2277 2486244 - 2487116 + | hypothetical protein TERM 2790 2487728 - 2487713 - g 70 -2.4 -4.88217 | overlap 2487716 ATCAAAAAATCAAAA CAAGCC TGCT GGCCGG GCAATCGCTGGAAGG TERM 2791 2488489 - 2488503 + G 83 -11.4 -3.53012 | CCAATTGCCGGCTCC TGCGGC ACC GCCGCA TTTCGCAAAGAAGCC YE2278 2487463 - 2490057 + | putative phosphodiesterase TERM 2792 2490136 - 2490124 - f 72 -7.7 -3.8613 | opp_overlap 2490092, overlap 2490115 TCTAAACACTAATAA GTGAC ATT GTCAC TATCGCTGGGTTGGG TERM 2793 2490145 - 2490163 + F 81 -7.4 -4.61873 | TTGTCACTATCGCTG GGTTGGGT CAT GCTCAACC TTTTCATTTGTCGGC TERM 2794 2490170 - 2490181 + F 79 -3 -5.37345 | TGCTCAACCTTTTCA TTTG TCGG CAAA TTTTTTATCCTTGCC YE2279 2490228 - 2491418 + | putative multidrug resistance protein dadB 2492700 - 2491633 - | alanine racemase, catabolic dadA 2494204 - 2492900 - | D-amino acid dehydrogenase small subunit TERM 2795 2495078 - 2495052 - g 73 -8.1 -3.9716 | overlap 2495050 TAATGGAAGAAAACA CCATTACTATG CAAGC CTTAGTAATGG CTCACGCCTGTTATG YE2282 2494715 - 2496250 + | hypothetical protein TERM 2796 2496287 - 2496303 + T 80 -6.5 -4.83269 | opp_overlap 2496287 ATATCAAATGGAAAA GGGGC GCGGTAG GCCCC TTTTTACTGTGCTAT TERM 2797 2496303 - 2496287 - T 72 -6.5 -4.38313 | opp_overlap 2496287 ATATCAAATGGAAAA GGGGC GCGGTAG GCCCC TTTTTACTGTGCTAT fadR 2497055 - 2496336 - | fatty acid metabolism regulator TERM 2798 2496668 - 2496686 + g 73 -5.2 -4.60889 | overlap 2496659 CAACCGTCTGCGCTT GTGCCAGA ATT TCTTGCGC TTTTTCGGGATGATT TERM 2799 2497699 - 2497710 + G 81 -5.8 -4.85782 | opp_overlap 2497699 ATCTACTTTATGAAA CAGC TCTT GCTG TTTATTTTTACCAAA TERM 2800 2498058 - 2498069 + G 72 -5.8 -4.32651 | opp_overlap 2498057 2498058, overlap 2498048 2498047 GATTATCGCCAAAAG TGCC GGTT GGCA TTTTGGTGACTTCTT nhaB 2497366 - 2498940 + | sodium/proton antiporter dsbB 2499170 - 2499700 + | disulfide bond formation protein B TERM 2801 2499766 - 2499786 + T 100 -9 -5.1523 | gap 1 TCTTTATCTGTTTAA GGCGCC-CA GAAA TGTGGCGCC TTTTTATCTTCTGGA lpxA2 2500625 - 2499837 - | acyl-[acyl-carrier-protein]--udp-N-acetylglucos amine O-acyltransferase TERM 2802 2500808 - 2500791 - R 89 -6.9 -5.36441 | opp_overlap 2500791 CGCCCATATAAAAAA CCCCGGC GAAA ACCAGGG TTTTGAAAGGGTGCC TERM 2803 2501060 - 2501075 + r 93 -4 -5.80003 | overlap 2501062 AATATAATTTTATAT TTCAGA ACAA TCTGGA TTTTTTATTTCTTGC TERM 2804 2501153 - 2501136 - R 89 -6.9 -5.35354 | opp_overlap 2501136 2501144, overlap 2501129 GATACAACTAAAAAA GGCCACC TGAT GGCAGCC TTCTTTTACCAATAT YE2288 2501535 - 2501179 - | hypothetical protein TERM 2805 2501692 - 2501742 + H 71 -3.3 -5.03145 | opp_overlap 2501688, overlap 2501735 GGTTTTAGCAATGCA TTACCGCAAACTGACTCACTTCG CATGT TGCTTTGAGTTGTTTTGCGGTAA TTTTTTGCCCCATTG YE2289 2502036 - 2502494 + | putative phage membrane protein YE2290 2502488 - 2502814 + | putative phage-associated acyl carrier protein TERM 2806 2502820 - 2502837 + F 80 -6.2 -4.75289 | opp_overlap 2502820 ATACGATTGAAATAG CCGGGT AATTAA GCCCGG TTTTATCTTCTAGTC TERM 2807 2503707 - 2503692 - g 75 -3.2 -5.15117 | TAAAATGGCAAAAAA CAACCC TATA GCGTTG AGGCATTTGGCAGAT YE2291 2503099 - 2503740 + | hypothetical protein TERM 2808 2503992 - 2504013 + T 83 -9.4 -3.97108 | opp_overlap 2503994, overlap 2503988 TAGCTAACGTTTAAC CACCGGGT AATTAA GCCCGGTG TTGTATTTTACGCTT YE2292 2504479 - 2504021 - | putative phage tail fiber assembly protein TERM 2809 2504287 - 2504304 + g 73 -8.4 -3.89501 | AAATATCGATATCTT CGGGTG ACAGTC CACCCG TTTCTACCCATGTTC YE2293 2506299 - 2504488 - | putative phage tail protein TERM 2810 2504652 - 2504636 - G 76 -7.3 -4.40894 | CAAACCACAGCAAAA CTTGGTC GGT AACCAAG CGGTAATGTAGTAAT YE2294 2507029 - 2506325 - | phage-like protein YE2295 2507295 - 2507029 - | hypothetical protein YE2296 2510480 - 2507298 - | putative phage host specificity protein TERM 2811 2508326 - 2508338 + g 74 -9.1 -3.73509 | opp_overlap 2508312, overlap 2508318 ATCCAACTGGCATTG GAGGG TTT CCCTC TTTGCCGTTTAATGT TERM 2812 2510498 - 2510514 + H 70 -9.4 -2.89874 | opp_overlap 2510498, overlap 2510497 TTCACCCATAAAAAA GCCCAC ATCTA GTGGGC GTTTACGTATTTATT TERM 2813 2510514 - 2510498 - H 100 -9.4 -5.28176 | opp_overlap 2510498 2510497 TTCACCCATAAAAAA GCCCAC ATCTA GTGGGC GTTTACGTATTTATT YE2297 2510655 - 2510954 + | hypothetical protein TERM 2814 2510966 - 2510981 + T 100 -11.8 -4.58466 | opp_overlap 2510961 2510966 GTAATATCAAGTTAA GCGGCG ATTT CGCCGC TTTTATAATTGTGAA TERM 2815 2510981 - 2510966 - T 89 -11.8 -3.23979 | opp_overlap 2510966, overlap 2510961 GTAATATCAAGTTAA GCGGCG ATTT CGCCGC TTTTATAATTGTGAA YE2298 2511202 - 2510984 - | hypothetical protein YE2299 2511846 - 2511244 - | putative phage tail assembly protein TERM 2816 2511884 - 2511866 - R 91 -3.8 -5.7946 | opp_overlap 2511866 TCTCCAATAAAAAAA CCACCC AGAATTA AGGTGG TTTGATTTTGCCTAC YE2300 2512330 - 2511908 - | hypothetical protein TERM 2817 2512157 - 2512141 - G 71 -8.7 -3.72374 | overlap 2512139 CGCCATTAATAAACA CAGTTGC ATA GCAACCG CCGCCTATATAACCA YE2301 2512725 - 2512327 - | phage-related membrane protein TERM 2818 2512792 - 2512815 + r 73 -5.2 -4.64676 | opp_overlap 2512797, overlap 2512797 TAGGAGCTAGAATGC AAAAACCCGC CGGA GCGGGTTTAG TTTTATTCAAAATCG TERM 2819 2512810 - 2512797 - R 100 -9.5 -4.78149 | opp_overlap 2512797 2512792 GCTAGAATGCAAAAA CCCGC CGGA GCGGG TTTAGTTTTATTCAA TERM 2820 2512797 - 2512810 + r 88 -9.5 -4.3295 | opp_overlap 2512797, overlap 2512792 GCTAGAATGCAAAAA CCCGC CGGA GCGGG TTTAGTTTTATTCAA YE2302 2513546 - 2512818 - | hypothetical protein YE2303 2513896 - 2513558 - | hypothetical protein TERM 2821 2513966 - 2513940 - H 75 -5.9 -4.66833 | gap 1 GCCTAAGTGCAAAAA GCCACC-GAAAC TATA GTCTCCAGTGGC TACTCGTGGGAATAT TERM 2822 2514115 - 2514090 - H 70 -7.7 -3.63968 | GTGGAAAGGTGTAAA TTAAGCGCATA CAGA TACACGCTTAA AGATATCGACTTACC YE2305 2514312 - 2514725 + | hypothetical protein TERM 2823 2514817 - 2514795 - T 75 -8.4 -3.86897 | opp_overlap 2514795 CGGACGCGTTAGAAA GCAAAGCCCA TTT CGGGTTTTGC TTGTGTAGGTACTAT TERM 2824 2514795 - 2514817 + T 78 -9.9 -3.53164 | opp_overlap 2514795 CGGACGCGTTAGAAA GCAAAGCCC ATTTC GGGTTTTGC TTGTGTAGGTACTAT YE2306 2515153 - 2514836 - | hypothetical protein TERM 2825 2515064 - 2515082 + g 75 -6 -4.61873 | TTCTGATACCAGAGC TATGGCAG GTA CTGGCATA TTTTCATTTATCGGA TERM 2826 2515293 - 2515278 - R 82 -4.7 -5.38326 | opp_overlap 2515278, overlap 2515272 TGAAGGAAACAAAAA CCAAC TGAGCG GTTGG TTTTTCAGTGTACGG TERM 2827 2515278 - 2515293 + r 73 -5.4 -4.70659 | opp_overlap 2515278 2515272 TGAAGGAAACAAAAA CCAACT GAGC GGTTGG TTTTTCAGTGTACGG TERM 2828 2515343 - 2515329 - R 100 -8.5 -5.42514 | opp_overlap 2515329 CCAGAAAGCAAAAAA CCCGC ACTCG GCGGG TCTAATTCTGCATCT YE2308 2515712 - 2515365 - | TonB-related phage protein TERM 2829 2515684 - 2515699 + g 79 -3.2 -5.3104 | opp_overlap 2515685, overlap 2515685 GAAAAGCACAACACC AGAAGC CCAA GCTTCA TTTTATTTTTCATGA TERM 2830 2515800 - 2515822 + r 70 -7.8 -3.62572 | opp_overlap 2515785 2515791 2515801, overlap 2515787 2515785 2515784 2515801 GATCAATATCGCAAT ATTGATCGTT TAA AACGATCAAC TTTAAAATAATCATC TERM 2831 2515821 - 2515801 - R 84 -11.3 -3.10028 | opp_overlap 2515787 2515785 2515784 2515801 2515800, overlap 2515785 2515791 ATCAATATCGCAATA TTGATCGTT TAA AACGATCAA CTTTAAAATAATCAT TERM 2832 2515801 - 2515821 + r 81 -11.3 -2.77222 | opp_overlap 2515785 2515791 2515801, overlap 2515787 2515785 2515784 2515800 ATCAATATCGCAATA TTGATCGTT TAA AACGATCAA CTTTAAAATAATCAT YE2310 2516571 - 2515867 - | putative phage minor tail protein YE2311 2517326 - 2516574 - | hypothetical protein YE2312 2517684 - 2517343 - | hypothetical protein YE2313 2520482 - 2517687 - | putative phage tail protein TERM 2833 2518641 - 2518665 + g 80 -7.2 -4.59853 | opp_overlap 2518643 CTTGTTCTTGGCAAC GATGGAGG CCGTATACT CCTCCATC TTTTTCAGCGCTTCA TERM 2834 2519446 - 2519430 - G 77 -4.3 -5.15634 | TATCTCATCAAAAAA TGAGGGC AAA GTCCCCA TGGAGTTCTTTATCT TERM 2835 2519933 - 2519917 - G 71 -8.7 -3.64103 | TACGCATATCCCAAA GCTGCTA CAG CAGCAGC TGCTCCACCAATCAG YE2314 2520914 - 2520735 - | hypothetical protein YE2315 2521354 - 2521043 - | hypothetical protein YE2316 2522287 - 2521367 - | hypothetical protein TERM 2836 2522331 - 2522318 - R 100 -9.5 -5.71712 | TTGGATATAAAAAAA CCGGC ATAG GCCGG TAGATGTGGGATTTA YE2317 2522761 - 2522354 - | hypothetical protein YE2318 2523342 - 2522758 - | hypothetical protein TERM 2837 2523054 - 2523012 - G 76 -11.2 -3.19668 | overlap 2523031 GAGCATCTAAGCCAA CCTGCCAGTTACCACGGAAG CGG CCACCGGTGTAACCAGCAGG CGCTTTAATGTCCAT YE2319 2523694 - 2523344 - | hypothetical protein YE2320 2524221 - 2523694 - | hypothetical protein TERM 2838 2524208 - 2524195 - G 79 -9.5 -3.96148 | TTCCTCCAGGATAAA GGGGC CGCA GCCCC TCATAGTCATCACCC YE2321 2525429 - 2524224 - | hypothetical protein YE2322 2526216 - 2525443 - | hypothetical protein TERM 2839 2526221 - 2526231 + r 74 -6.8 -4.2461 | CGGAATAGCATGCTG TCCC CTT GGGA TTTATTGCTGGGCCT TERM 2840 2526279 - 2526260 - R 91 -8.5 -4.72272 | CTGGCCCATTAAAAA GCCCCGC ACGATG GCGAGGC TCAGATTTTGGATAA YE2323 2527450 - 2526338 - | hypothetical protein YE2324 2528839 - 2527451 - | hypothetical protein TERM 2841 2528526 - 2528544 + g 75 -8 -4.1964 | overlap 2528530 TGATAAATGCTGATA CCTGCGCC ATT GGCGTTGG TTTTCAGGTATTCCA TERM 2842 2528530 - 2528540 + g 71 -8.2 -3.68767 | overlap 2528526 AAATGCTGATACCTG CGCC ATT GGCG TTGGTTTTCAGGTAT YE2325 2530401 - 2528839 - | putative phage terminase large subunit YE2326 2530970 - 2530398 - | putative phage terminase, small subunit YE2327 2530999 - 2531142 + | hypothetical protein TERM 2843 2531315 - 2531328 + T 88 -9.5 -4.29326 | opp_overlap 2531315 GCATCCAATAAAAAA CCGCC CGGA GGCGG TTTATTGACTTTGAC TERM 2844 2531328 - 2531315 - T 100 -9.5 -5.4833 | opp_overlap 2531315 GCATCCAATAAAAAA CCGCC CGGA GGCGG TTTATTGACTTTGAC YE2328 2531527 - 2531348 - | hypothetical protein YE2329 2531679 - 2532017 + | hypothetical protein YE2331 2532870 - 2532181 - | phage-like protein TERM 2845 2533045 - 2533024 - R 100 -8.7 -5.28176 | opp_overlap 2533024 2533023 TGCAGGTACAAAAAA GGCCCAGTC GTTA AACTGAGCC CTGTTTTTTTGGTTT YE2333 2533898 - 2533506 - | phage exported protein YE2334 2534365 - 2533883 - | putative phage lysozyme TERM 2846 2534687 - 2534670 - R 100 -9.1 -5.63517 | GGGCTAAATAAAAAA GGCCCAC CGAG GTGAGCC TTAAGATTTTATAGT YE2335 2535218 - 2534688 - | hypothetical protein TERM 2847 2534806 - 2534817 + g 89 -5.8 -5.28983 | CCGCCAACTTTTATT CTGG ATCT CCAG TTTTTATATTTTCCA TERM 2848 2535377 - 2535360 - R 100 -8.4 -5.29385 | opp_overlap 2535360 AATGCAATTAAAAAA GCCCAC TCGACG GTGGGC TATGGTAAGTGCTGA YE2336 2535942 - 2535454 - | putative late gene antiterminator protein YE2337 2536547 - 2535939 - | NinG-like phage protein YE2339 2537351 - 2536905 - | NinB-like phage protein YE2340 2537745 - 2537344 - | hypothetical protein YE2341 2538044 - 2537742 - | hypothetical protein YE2342 2538268 - 2538041 - | hypothetical protein YE2343 2538309 - 2538902 + | hypothetical protein YE2344 2539240 - 2539004 - | hypothetical protein YE2345 2539932 - 2539237 - | DNA replication protein YE2346 2540828 - 2539929 - | putative DNA-binding phage protein YE2347 2541490 - 2540825 - | phage-like protein YE2348 2541742 - 2541497 - | hypothetical protein TERM 2849 2541533 - 2541560 + g 100 -14.2 -4.86731 | opp_overlap 2541533 ATACCTGATTACCAA CGCCCTAACAGT TCGC GCTGTTGGGGCG TTTTCTTTAGAACAG TERM 2850 2541560 - 2541533 - G 76 -11.3 -3.21925 | opp_overlap 2541533 ATACCTGATTACCAA CGCCCTAACAG TTCGCG CTGTTGGGGCG TTTTCTTTAGAACAG YE2349 2542118 - 2541846 - | phage transcriptional regulatory protein YE2349A 2542458 - 2542234 - | phage transcriptional regulatory protein cI 2542568 - 2543167 + | repressor protein CI TERM 2851 2543366 - 2543345 - T 95 -3.1 -5.96219 | CAGTCACAAAAAAAA TCAACAATA TCCG CATTGTTAA TTTCCATTCTACGAA TERM 2852 2543455 - 2543437 - T 71 -6.8 -4.16681 | opp_overlap 2543437 2543447 AATACTATTTCAAAA CATTAACT TAT AGCTAATG CTATTGAATTATTGT YE2350A 2543716 - 2543486 - | hypothetical protein TERM 2853 2545027 - 2545055 + G 76 -9.7 -3.62591 | opp_overlap 2545035, overlap 2545028 TTATTAATTCATATC TTGAGAAACAAGC ATC GCTTATTTCTCAG TTTGACAATTCTGAG TERM 2854 2545028 - 2545054 + G 74 -11 -2.77233 | opp_overlap 2545035, overlap 2545027 TATTAATTCATATCT TGAGAAACAAGC ATC GCTTATTTCTCA GTTTGACAATTCTGA YE2352 2544663 - 2545238 + | hypothetical protein TERM 2855 2545254 - 2545269 + F 91 -10.4 -4.18018 | opp_overlap 2545236 CCTTTAGCTTTAACG GCCACC GCAA GGTGGC TTTTCAATACCCCCA TERM 2856 2545498 - 2545488 - g 70 -2.4 -4.91511 | ACCTGACTACAAAAA CCGC CCT GCTG AATTCGTGCACTACA YE2353 2545366 - 2545776 + | hypothetical protein TERM 2857 2546487 - 2546453 - g 71 -8.7 -3.76224 | TGCGCATGGATTAAA CCCTGATGTGC-CGGAA GGA CTCCACGCACA-CAGGG CGCTGTACGACTGCT YE2355 2546079 - 2546744 + | exodeoxyribonuclease X TERM 2858 2546999 - 2546974 - g 77 -4.8 -5.00616 | opp_overlap 2546982 CCGGCGCGCAAAAAA GAAAATCGTC ATCGTG GATGATTTTC AATATGTGATGGGCA TERM 2859 2546982 - 2546994 + G 71 -6.3 -4.26589 | opp_overlap 2546974 CAAAAAAGAAAATCG TCATC GTG GATGA TTTTCAATATGTGAT YE2356 2546744 - 2547409 + | phage ATP/GTP-binding protein YE2357 2547409 - 2548086 + | hypothetical protein YE2358 2548482 - 2548850 + | hypothetical protein YE2359 2549000 - 2549503 + | hypothetical protein TERM 2860 2549525 - 2549540 + F 100 -8.2 -5.45652 | CCCACCCCGTCTAGG CCTCGC AAAT GCGGGG TTTTTTATTGGGAGT TERM 2861 2549751 - 2549763 + F 74 -10.5 -2.58812 | overlap 2549748 AGTAACTATCTCAGC GCCGG ACC CCGGC TGCGTTGAATTTGCC dam 2550161 - 2551021 + | putative adenine-specific modification methylase dcm 2551018 - 2552763 + | putative cytosine-specific modification methylase YE2363 2553100 - 2553348 + | putative phage excisionase TERM 2862 2553411 - 2553435 + G 100 -12.1 -4.55295 | opp_overlap 2553411 AACTGGAGTTGAAAA CCACGGGGGCA AAT TGCGCCTGTGG TTTATTTATAAAGGG TERM 2863 2553435 - 2553411 - g 83 -9.9 -4.14511 | opp_overlap 2553411 AACTGGAGTTGAAAA CCACGGGGGCA AAT TGCGCCTGTGG TTTATTTATAAAGGG int 2553376 - 2554665 + | putative phage integrase YE2365 2555136 - 2554690 - | hypothetical protein YE2366 2555907 - 2555251 - | hypothetical protein YE2367 2556911 - 2555988 - | putative lipoprotein TERM 2864 2557042 - 2557025 - R 78 -9.1 -3.76634 | ACCCCAAAGATATAA CAGCCGC AAAA GCGACTG TAACCATTGACAATT YE2368 2557372 - 2557100 - | hypothetical protein YE2370 2557941 - 2557576 - | hypothetical protein TERM 2865 2558764 - 2558751 - g 85 -8.1 -4.67904 | opp_overlap 2558758, overlap 2558742 GATGAACGTCAAAAA CGTGC GATA GCACG GGCTGGTTTGCCATT TERM 2866 2558999 - 2559033 + G 75 -3.5 -5.0133 | gap 1, overlap 2559000 GATGCGCGGTCGTGC GCTAGCA-GGCGCATC AGGT GATGCGCAGTGCCAGA TTTTTTGCACGCATC minC 2558490 - 2559176 + | septum formation inhibitor minD 2559202 - 2560014 + | cell division inhibitor MinD minE 2560018 - 2560287 + | cell division topological specificity factor MinE TERM 2867 2560299 - 2560334 + T 89 -6.9 -5.26918 | opp_overlap 2560301, overlap 2560302 2560303 ATGATTTCTTCGCAA TAGCTACCCCCTGTA TTTATT TACAGGGGGTAATTC TTTTTTATAAACTGT TERM 2868 2560332 - 2560301 - T 71 -9.5 -3.01924 | opp_overlap 2560299 2560302 2560303 GATTTCTTCGCAATA GCTACCCCCTGTA TTTATT TACAGGGGGTAAT TCTTTTTTATAAACT TERM 2869 2560302 - 2560331 + T 100 -10.8 -4.72201 | opp_overlap 2560301, overlap 2560299 2560303 ATTTCTTCGCAATAG CTACCCCCTGTA TTTATT TACAGGGGGTAA TTCTTTTTTATAAAC TERM 2870 2560303 - 2560330 + T 100 -14.3 -3.42236 | opp_overlap 2560301, overlap 2560302 2560299 TTTCTTCGCAATAGC TACCCCCTGTA TTTATT TACAGGGGGTA ATTCTTTTTTATAAA rnd 2561547 - 2560426 - | ribonuclease D TERM 2871 2561140 - 2561150 + g 77 -6.8 -4.614 | AGCAATCCAATCCGT GCGA GAT TCGC TTTTATCTAATTCGA TERM 2872 2561619 - 2561585 - R 100 -18.1 -3.60296 | gap 1, opp_overlap 2561590 2561593, overlap 2561587 2561590 2561593 TAGTTCTATGGCAAA CA-CAACAACGCCGGT GATA ACCGGCGTTGTTGATG ATGATTGAGTGACTC TERM 2873 2561616 - 2561587 - R 100 -20.9 -3.38046 | opp_overlap 2561590 2561593, overlap 2561585 2561590 2561593 GTTCTATGGCAAACA CAACAACGCCGGT GATA ACCGGCGTTGTTG ATGATGATTGAGTGA TERM 2874 2561590 - 2561613 + r 100 -16.8 -3.25015 | opp_overlap 2561587 2561585 2561590 2561593, overlap 2561593 CTATGGCAAACACAA CAACGCCGGT GATA ACCGGCGTTG TTGATGATGATTGAG TERM 2875 2561613 - 2561590 - R 100 -16.8 -3.82946 | opp_overlap 2561590 2561593, overlap 2561587 2561585 2561593 CTATGGCAAACACAA CAACGCCGGT GATA ACCGGCGTTG TTGATGATGATTGAG TERM 2876 2561610 - 2561593 - R 100 -12.7 -4.03586 | opp_overlap 2561593 2561590, overlap 2561590 2561587 2561585 TGGCAAACACAACAA CGCCGGT GATA ACCGGCG TTGTTGATGATGATT TERM 2877 2561593 - 2561610 + r 100 -12.7 -3.7614 | opp_overlap 2561590 2561587 2561585 2561593, overlap 2561590 TGGCAAACACAACAA CGCCGGT GATA ACCGGCG TTGTTGATGATGATT fadD 2563339 - 2561645 - | long-chain-fatty-acid--CoA ligase TERM 2878 2563106 - 2563120 + g 75 -5.6 -4.82901 | opp_overlap 2563106 2563107, overlap 2563107 GTTAGGCATCATCAA CGCGAC ACG GTCGCC TTTTTGTAACCCCAA TERM 2879 2563107 - 2563119 + g 71 -9.1 -3.49419 | opp_overlap 2563106 2563107, overlap 2563106 TTAGGCATCATCAAC GCGAC ACG GTCGC CTTTTTGTAACCCCA TERM 2880 2563623 - 2563642 + r 100 -15 -3.68988 | opp_overlap 2563623 GGATAGATGCAAAAA GGGCGCTG AATT CAGCGCCC TTCTGTTAAATACAC TERM 2881 2563642 - 2563623 - R 100 -15 -4.72846 | opp_overlap 2563623 GGATAGATGCAAAAA GGGCGCTG AATT CAGCGCCC TTCTGTTAAATACAC YE2376 2564231 - 2563680 - | putative lipoprotein YE2377 2565090 - 2564392 - | hypothetical protein YE2378 2566991 - 2565165 - | DEAD box family helicase TERM 2882 2566491 - 2566472 - G 70 -10 -3.1372 | overlap 2566470 TATCCGCCAGGAATA GATGGTGG TTAA CCACCACC ACATCAGCATCCATC TERM 2883 2566507 - 2566520 + g 74 -9.5 -3.53012 | ACATCAGCATCCATC GCCCG GCGG CGGGC TTTGACCACAAAACA YE2379 2567198 - 2567542 + | hypothetical protein YE2380 2567965 - 2567675 - | multidrug efflux system protein MdtI YE2381 2568371 - 2567991 - | putative inner membrane protein TERM 2884 2568412 - 2568427 + r 78 -5.4 -5.02074 | ATCGATTGCAAAGTG CAGGGA AATA TTCCTG TTTTTTGAACAATCA TERM 2885 2568914 - 2568888 - R 100 -10.2 -5.44119 | opp_overlap 2568893, overlap 2568893 GTTATTCTAAAAAAA CAAAACCCCCGC ATT GCAGAGGTTTTA TCGTGGGCAACGAAT TERM 2886 2568909 - 2568893 - R 100 -7.9 -5.55855 | opp_overlap 2568893, overlap 2568888 TCTAAAAAAACAAAA CCCCCGC ATT GCAGAGG TTTTATCGTGGGCAA eda 2569608 - 2568967 - | keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase TERM 2887 2569708 - 2569668 - R 93 -12 -3.60098 | gap 1 AGGTGTTAGTTGAAA TATGGCAGGCAGAA-CGTG CATT CCTGCTTCTGCCTGCCATA AAGAATCACAATGCG TERM 2888 2569723 - 2569739 + r 70 -5.1 -4.45068 | opp_overlap 2569714 AAAGAATCACAATGC GAGCC AGCTAAC GGCTC TTTATTATTGCGCCT TERM 2889 2569749 - 2569765 + r 72 -9.4 -3.21593 | overlap 2569747 CGGCTCTTTATTATT GCGCCT GGGTG AGGCGC TGTTATCGGGCAATA TERM 2890 2569834 - 2569861 + r 73 -7.2 -4.1711 | opp_overlap 2569836 CTCAATAACTCGAAT TATTTAGGGTAT AGTC ATAACCTAAATA TTTATTCGAACTCAT zwf 2571347 - 2569863 - | glucose-6-phosphate 1-dehydrogenase TERM 2891 2571024 - 2571047 + g 79 -9.7 -3.889 | opp_overlap 2571024 2571026 GTTTTTCTGATCCAA CATTTTGCC CAATTT GGCAAAATG TTTGCTGTCATTGAC TERM 2892 2571470 - 2571457 - H 71 -2.3 -5.16472 | AAAAAGGTCAAAAAA CACGC GATA GAGTG GCAGGCCGCGTCAAA hexR 2571700 - 2572569 + | DNA-binding transcriptional regulator HexR pykA 2572789 - 2574231 + | pyruvate kinase TERM 2893 2574262 - 2574281 + T 95 -7.1 -5.57396 | opp_overlap 2574262 GACAAAAAGCAAAAA CCCGCTG ATCACC TAGCGGG TTTTTTATTCCTTAT TERM 2894 2574281 - 2574262 - T 87 -6.4 -5.2197 | gap 1, opp_overlap 2574262 GACAAAAAGCAAAAA CCCGCT-GA TCA CCTAGCGGG TTTTTTATTCCTTAT msbB 2575284 - 2574322 - | lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase TERM 2895 2575364 - 2575336 - R 100 -13.1 -3.85817 | opp_overlap 2575335 2575336 ACCGCTGGGTATAAA CGCGCCGGTAGCC CAT AGCTACCGGCATG CGATTAATCCAGTTG TERM 2896 2575336 - 2575366 + r 70 -9.8 -2.50994 | gap 2, opp_overlap 2575336, overlap 2575335 ACCGCTGGGTATAAA CGC--GCCGGTAGC CCATA GCTACCGGCATGCG ATTAATCCAGTTGCA YE2387 2576621 - 2575368 - | hypothetical protein TERM 2897 2576592 - 2576572 - G 93 -8.2 -5.02323 | GGATGATAAACAAAA GGCCGCCA AACAG CGACGGCC AGTGTCATTACAGTC znuA 2577661 - 2576699 - | high-affinity zinc transporter periplasmic component TERM 2898 2577579 - 2577551 - G 75 -11.8 -2.53918 | gap 1, overlap 2577550 2577549 2577553 TGAGGCGATAAAACC CAGCGGTCG-CAC TGAT GTAACGACCGCTG CTGAGGCAATATTAA znuC 2577737 - 2578495 + | high-affinity zinc transporter ATPase znuB 2578492 - 2579277 + | high-affinity zinc transporter membrane component TERM 2899 2579283 - 2579318 + F 77 -10.6 -3.14564 | opp_overlap 2579282 2579304 GCGCGGGTAATAATT GTTAAGTGGGGTTTAT ATTA ATAAACCCCATTGAGC TTAATGACAAAGTGC TERM 2900 2579392 - 2579418 + F 72 -7.9 -3.82218 | gap 1, overlap 2579391 CCTCCCTGGGGGCTC GAG-CCGCGCCG TCCC TGGCGCGGACGC TTTACTCCTCTACCT TERM 2901 2579482 - 2579505 + F 100 -12.6 -3.62224 | TGTCAGCAGTCTGAG TGGGGTTTAT ATTA ATAAACCCCA TTCTTAACCACCTCT TERM 2902 2579623 - 2579601 - f 74 -9.2 -3.33035 | overlap 2579599 2579597 CACAAATACAATATA TATGCAGTGT AAT ACCCTGCATA ACACTTCAAACATTG TERM 2903 2580574 - 2580584 + G 73 -5.4 -4.52589 | GATGATTGAAGCTAT CGTA TTT TACG TTTTATATGCACAGA YE2391 2579738 - 2581219 + | inner membrane transporter YhiP ruvB 2582274 - 2581270 - | Holliday junction DNA helicase B ruvA 2582927 - 2582310 - | Holliday junction DNA helicase motor protein TERM 2904 2582874 - 2582891 + g 77 -6.3 -4.58663 | gap 1 ACCGTTAGTTTCCAG CAG-CACC AAG GGTGGCTG TTTTTCCAGAATGAT TERM 2905 2583012 - 2582993 - R 100 -12.2 -5.34555 | TTATAGCATAAAAAA GGCTGGAT GGAT ATCCAGCC TACAATAACAGTTAA ruvC 2583571 - 2583050 - | Holliday junction resolvase TERM 2906 2583607 - 2583631 + r 100 -14.3 -3.31792 | CAGTGCTTCTAATGG CACCGGCCACA AAA TGTGGCCAGTG TTATACCCGTCATAC YE2395 2584482 - 2583739 - | hypothetical protein TERM 2907 2584435 - 2584449 + g 75 -5.6 -4.66537 | overlap 2584425 2584437 GCGCTTGGCATCCTG TGCCGC TTT GCGGTG TTTTGTGTTGGCCCA TERM 2908 2584437 - 2584447 + g 73 -8.2 -3.94773 | overlap 2584425 2584435 GCTTGGCATCCTGTG CCGC TTT GCGG TGTTTTGTGTTGGCC ntpA 2585045 - 2584623 - | dATP pyrophosphohydrolase aspS 2587001 - 2585205 - | aspartyl-tRNA synthetase TERM 2909 2586913 - 2586902 - G 73 -2.2 -5.16841 | GCATATCAATAAAAA TCAG GCCA CCGA GATCACGACGACGGT TERM 2910 2587026 - 2587055 + H 75 -8.5 -3.84183 | overlap 2587025 TTTTACTCAGCCGAT GCCGCACGCGT TATGCACT GCCCGTGCGGC TATTTTCTGATGAGC TERM 2911 2587886 - 2587876 - g 70 -2.4 -4.85545 | overlap 2587871 ATCAAAGTAATAAAA CACC AAT GGGG GGCGTTTTACGGTAC YE2398 2587549 - 2588145 + | hypothetical protein YE2399 2588193 - 2589008 + | hypothetical protein YE2400 2589200 - 2589595 + | hypothetical protein TERM 2912 2589647 - 2589663 + F 79 -10.8 -3.14463 | AACACAGTTAGTTCG GGCGGC TAATT GCCGCC TTCATGCCAGCCCTT YE2401 2589884 - 2590585 + | hypothetical protein YE2402 2590582 - 2591553 + | hypothetical protein TERM 2913 2591559 - 2591579 + T 86 -11.8 -3.05562 | opp_overlap 2591559 TAAACCATAAAAAAA CCCCGGTC TGATT GGCCGGGG TATTGACAACTTTAT TERM 2914 2591579 - 2591559 - T 100 -9.6 -5.75599 | opp_overlap 2591559 TAAACCATAAAAAAA CCCCGGTC TGATT GGCCGGGG TATTGACAACTTTAT cutC 2592377 - 2591613 - | copper homeostasis protein CutC TERM 2915 2592205 - 2592187 - G 78 -5.9 -4.72272 | overlap 2592189 TCGCTGTAGCAAAAA TCCCCCC CACGC GGGCGGA CGATAGGATGCACGG YE2404 2593179 - 2592619 - | hypothetical protein TERM 2916 2594497 - 2594471 - g 83 -4.5 -5.28778 | gap 1 ATTATCCAGAAAAAA GATGGTGGCTAT CTCT ACA-CCACCACC GACATCGCCTGTGCC TERM 2917 2595240 - 2595228 - g 78 -5.5 -4.87626 | TGCTAACAGCAAAAA CCCTG AAA CAAGG GCTGGATACCTTAGG argS 2593550 - 2595280 + | arginyl-tRNA synthetase TERM 2918 2595305 - 2595292 - T 100 -9.5 -5.02074 | GTAGTCCGTAAAAAA GGCCC CTCG GGGCC TTAGAAATGGTCAAT YE2407 2600218 - 2595338 - | putative hemolysin YE2408 2602066 - 2600399 - | putative hemolysin activator protein TERM 2919 2600907 - 2600919 + g 75 -3.3 -5.10154 | opp_overlap 2600907 TTATCAGCAGCAAAC CAGGG CAG CCCTC TTTTTACTTTTACGT TERM 2920 2601225 - 2601205 - G 70 -9.7 -3.23216 | overlap 2601207 CTGTATGATGAGCAA GAGCACTGA GCG TCAGTGCGC CATAAGGGACGGAGT TERM 2921 2601223 - 2601207 - G 76 -10.9 -3.18023 | overlap 2601205 GTATGATGAGCAAGA GCACTGA GCG TCAGTGC GCCATAAGGGACGGA TERM 2922 2602339 - 2602353 + r 72 -7.1 -4.05245 | opp_overlap 2602339, overlap 2602325 TTATATGTAAAAAAA CCCGA ACTTA TCGGG TTTAGTTATATACTA TERM 2923 2602353 - 2602339 - R 95 -7.1 -5.50499 | opp_overlap 2602325 2602339 TTATATGTAAAAAAA CCCGA ACTTA TCGGG TTTAGTTATATACTA mviN 2604034 - 2602499 - | hypothetical protein TERM 2924 2603927 - 2603915 - G 83 -4.8 -5.27923 | overlap 2603919 GAATGCGACAAAAAA GGCA TCCGT TGCC ATACCGGCACCAAAA TERM 2925 2604122 - 2604075 - R 70 -7.8 -3.65542 | gap 1, opp_overlap 2604086 2604087 2604090 2604119 2604121, overlap 2604073 2604084 2604086 2604087 2604090 TGTATTTGCAAAATA CGCTGTAAATATCAACGCCTGCT TTA AGCAGGCGTTGCT-TCTACCACC AGGATCATCACGATT TERM 2926 2604114 - 2604084 - R 100 -12.6 -3.58731 | opp_overlap 2604086 2604087 2604090, overlap 2604075 2604073 2604086 2604087 2604090 AAAATACGCTGTAAA TATCAACGCCTGCT TTA AGCAGGCGTTGCTT CTACCACCAGGATCA TERM 2927 2604112 - 2604086 - R 100 -15.2 -3.36341 | opp_overlap 2604086 2604087 2604090, overlap 2604084 2604075 2604073 2604087 2604090 AATACGCTGTAAATA TCAACGCCTGCT TTA AGCAGGCGTTGC TTCTACCACCAGGAT TERM 2928 2604086 - 2604112 + r 100 -15.2 -3.28791 | opp_overlap 2604084 2604075 2604073 2604086 2604087 2604090, overlap 2604087 2604090 AATACGCTGTAAATA TCAACGCCTGCT TTA AGCAGGCGTTGC TTCTACCACCAGGAT TERM 2929 2604087 - 2604111 + r 100 -18.7 -2.57132 | opp_overlap 2604087 2604086 2604084 2604075 2604073 2604090, overlap 2604086 2604090 ATACGCTGTAAATAT CAACGCCTGCT TTA AGCAGGCGTTG CTTCTACCACCAGGA TERM 2930 2604111 - 2604087 - R 100 -18.7 -2.61322 | opp_overlap 2604086 2604087 2604090, overlap 2604086 2604084 2604075 2604073 2604090 ATACGCTGTAAATAT CAACGCCTGCT TTA AGCAGGCGTTG CTTCTACCACCAGGA TERM 2931 2604090 - 2604108 + r 100 -14.6 -3.44146 | opp_overlap 2604090 2604087 2604086 2604084 2604075 2604073, overlap 2604087 2604086 CGCTGTAAATATCAA CGCCTGCT TTA AGCAGGCG TTGCTTCTACCACCA TERM 2932 2604108 - 2604090 - R 100 -14.6 -3.45571 | opp_overlap 2604087 2604086 2604090, overlap 2604087 2604086 2604084 2604075 2604073 CGCTGTAAATATCAA CGCCTGCT TTA AGCAGGCG TTGCTTCTACCACCA rimJ 2606357 - 2605773 - | ribosomal-protein-S5-alanine N-acetyltransferase YE2414 2606977 - 2607462 + | putative inner membrane protein YE2415 2607472 - 2607768 + | putative inner membrane protein YE2416 2608097 - 2607780 - | putative inner membrane protein TERM 2933 2607920 - 2607910 - G 73 -5.4 -4.63218 | TCGTCTGTAATAAAA GCTA CAA TAGC TAACAGCAAAAAAAG YE2418 2608774 - 2609979 + | multidrug resistance protein MdtH YE2419 2610197 - 2610760 + | hypothetical protein TERM 2934 2610782 - 2610816 + T 100 -12.3 -4.4017 | gap 1, opp_overlap 2610782 2610785 CCGCACATTTAATCA CAATGATACGG-GGTG CTTA CTCCTCCGTATCATTG TTTTCTGAAAGTTCA TERM 2935 2610816 - 2610782 - T 89 -12.3 -2.77182 | gap 1, opp_overlap 2610782, overlap 2610785 CCGCACATTTAATCA CAATGATACGG-GGTG CTTA CTCCTCCGTATCATTG TTTTCTGAAAGTTCA TERM 2936 2610813 - 2610785 - T 71 -8.2 -3.53366 | gap 1, opp_overlap 2610782, overlap 2610782 CACATTTAATCACAA TGATACGG-GGTG CTTA CTCCTCCGTATCA TTGTTTTCTGAAAGT YE2420 2611361 - 2610798 - | hypothetical protein TERM 2937 2611336 - 2611322 - G 79 -3.4 -5.24129 | GCTGGCGATAAAAAA GCGACC CAA GAACGC GACACACCAGAGAAA TERM 2938 2611417 - 2611403 - R 100 -8.6 -5.72207 | TCTAAATCAAAAAAA TGTGAC AAC GTCACA TAAAAATCACAACCC YE2421 2612161 - 2611424 - | putative hydrolase YE2422 2613251 - 2612310 - | putative oxidoreductase TERM 2939 2613567 - 2613599 + H 79 -10.7 -3.08581 | opp_overlap 2613574, overlap 2613574 CACCGCCATATTGAA GTGAAAAGCTCATGA AAT TCATGGGCTTTTTTC ATTTTAGCCGTTGAT TERM 2940 2613574 - 2613592 + H 100 -9.6 -5.46698 | opp_overlap 2613574, overlap 2613567 ATATTGAAGTGAAAA GCTCATGA AAT TCATGGGC TTTTTTCATTTTAGC TERM 2941 2613592 - 2613574 - H 75 -7.4 -4.29176 | opp_overlap 2613567 2613574 ATATTGAAGTGAAAA GCTCATGA AAT TCATGGGC TTTTTTCATTTTAGC YE2423 2613769 - 2614653 + | hypothetical protein TERM 2942 2614891 - 2614924 + T 91 -10.3 -4.16016 | opp_overlap 2614897, overlap 2614897 CACCGCCATATTCGA GCGAAAGGCGCTGAC GAAA GTCAGGGCCTTTTTC TTTGTTGGGCAATCC TERM 2943 2614918 - 2614897 - T 80 -10.1 -3.66378 | opp_overlap 2614897 2614891 CATATTCGAGCGAAA GGCGCTGAC GAAA GTCAGGGCC TTTTTCTTTGTTGGG TERM 2944 2614897 - 2614918 + T 100 -10.1 -5.47159 | opp_overlap 2614897, overlap 2614891 CATATTCGAGCGAAA GGCGCTGAC GAAA GTCAGGGCC TTTTTCTTTGTTGGG YE2425 2616072 - 2614957 - | putative inner membrane protein TERM 2945 2616111 - 2616132 + H 100 -10.1 -5.626 | TCTCAGTGTTGATTT TCGGCCGCA CACC TGCAGCCGA TTTTTTTCTAAAATC TERM 2946 2616759 - 2616790 + G 83 -13 -3.01924 | GGCATTATTGCTATT CCACTGGCTATGGC ACTG GCAATTGCCAGTGG TGTTCCCCCACAGTA YE2426 2616627 - 2618324 + | putative sulfate transporter YchM TERM 2947 2618363 - 2618345 - T 88 -6.7 -5.14563 | opp_overlap 2618345 2618339, overlap 2618325 TTCGCGATCAAAAAA GGCAGCT TAAGT AACTGCC TTTTTATTTATTCAG TERM 2948 2618345 - 2618363 + T 87 -4.5 -5.47159 | opp_overlap 2618325 2618345, overlap 2618339 TTCGCGATCAAAAAA GGCAGCT TAAGT AACTGCC TTTTTATTTATTCAG kdsA 2619254 - 2618400 - | 2-dehydro-3-deoxyphosphooctonate aldolase YE2428 2620204 - 2619395 - | putative transcriptional regulator TERM 2949 2619748 - 2619761 + g 73 -8.1 -4.00532 | CCTTGATCCACACTT CGAGC ATAT GCTCG TTTAGTGTTTCACCG TERM 2950 2619884 - 2619847 - G 77 -6.4 -4.56775 | gap 1, overlap 2619850 ATTGGGTCGGAAAAA TAACGGGCATCAA-TGG CAAGT CCAGTTGATGCGCGATA TGCAAGAAAATCACC TERM 2951 2619881 - 2619850 - G 78 -8.1 -4.40561 | gap 1, overlap 2619847 GGGTCGGAAAAATAA CGGGCATCAA-TGG CAAGT CCAGTTGATGCGCG ATATGCAAGAAAATC TERM 2952 2619907 - 2619895 - G 71 -4.1 -4.70169 | CGATATGCAAGAAAA TCACC CCT AGTGA TACCGGAGTCCCCTG YE2429 2620602 - 2620201 - | hypothetical protein TERM 2953 2620401 - 2620366 - G 78 -9 -3.98291 | overlap 2620400 AATAACGCCAAACAA CTTTTCAGTCAGCCAG GTTC CTTGCGGACTGAAAGG ATAAAATCCAGTAAT TERM 2954 2620460 - 2620422 - G 74 -3.1 -5.14163 | opp_overlap 2620431 2620441 2620445 2620446, overlap 2620426 2620431 2620432 2620444 2620446 ATCCAGTAATAAAAA TCAATACAATGCCGCTG ACAAA CAGCAGCGTATCATTGA TATGCGGCGTTATTT YE2430 2621474 - 2620620 - | N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase prfA 2622556 - 2621474 - | peptide chain release factor 1 TERM 2955 2621531 - 2621548 + g 71 -8.5 -3.76952 | TTCCTGCACAATCGG CTGGATA AGCA TATCCAG TTTACCTTCCATCAC TERM 2956 2621689 - 2621701 + g 78 -6.2 -4.72846 | GGCGCTCAGAGGCCT CGGC TTGCT GCCG TTTTTGCATCTCTGC hemA 2623850 - 2622588 - | glutamyl-tRNA reductase TERM 2957 2623540 - 2623520 - G 72 -10.4 -3.01712 | GTGGCTCGCCCAACA CCAGCGAG TCCAG CCCGCTGG CAACGCGCATCAGAT lolB 2624155 - 2624778 + | outer membrane lipoprotein LolB ipk 2624822 - 2625661 + | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase TERM 2958 2626660 - 2626638 - g 71 -7 -4.08692 | opp_overlap 2626647, overlap 2626647 TAATGCGGTTGAAAA CATCAAGCAC TCC GTGATTGACG AAGTAATTGTTTGTG prs 2625859 - 2626806 + | ribose-phosphate pyrophosphokinase TERM 2959 2626994 - 2627029 + T 93 -13.4 -2.80035 | opp_overlap 2626999, overlap 2626999 ATAATACAGATAAAG AAAAACCCGTTGAAGC GGCT GCTACAACGGGTTTTC TACTCTTGGTCTATA TERM 2960 2626999 - 2627024 + T 100 -13.3 -4.55625 | opp_overlap 2626999, overlap 2626994 ACAGATAAAGAAAAA CCCGTTGAAGC GGCT GCTACAACGGG TTTTCTACTCTTGGT TERM 2961 2627024 - 2626999 - T 100 -13.3 -5.4433 | opp_overlap 2626999 2626994 ACAGATAAAGAAAAA CCCGTTGAAGC GGCT GCTACAACGGG TTTTCTACTCTTGGT YE2436 2627433 - 2627161 - | hypothetical protein pth 2627765 - 2628358 + | peptidyl-tRNA hydrolase YE2438 2628871 - 2628413 - | hypothetical protein TERM 2962 2628949 - 2628934 - H 79 -3.2 -5.31059 | ACATTAAGCAAAAAA CTTCAG GTAA CGGAAG CGTGATCCAGAGCAC TERM 2963 2629084 - 2629109 + H 74 -4.7 -4.8384 | opp_overlap 2629084 TAAATTTTGATTACA TCGGCCCGTTA ACCC TAACGAGTTGA TTTTTAAGTTATTTA YE2439 2629139 - 2630230 + | translation-associated GTPase TERM 2964 2630293 - 2630310 + T 100 -11.3 -5.42862 | opp_overlap 2630293 ATAAACTCTATAAAA TCCACGC GGTT GCGTGGA TTTTTTTCACAATAT TERM 2965 2630310 - 2630293 - T 100 -11.3 -4.45577 | opp_overlap 2630293 ATAAACTCTATAAAA TCCACGC GGTT GCGTGGA TTTTTTTCACAATAT ampC 2631542 - 2630376 - | beta-lactamase TERM 2966 2630698 - 2630714 + g 74 -6.5 -4.33754 | overlap 2630701 AAATAACGTGACTGA GATGCGA TGA TCGCTTC TTTTAGCTTATCGTT TERM 2967 2630701 - 2630711 + g 71 -6.8 -4.27465 | overlap 2630698 TAACGTGACTGAGAT GCGA TGA TCGC TTCTTTTAGCTTATC TERM 2968 2631389 - 2631401 + g 73 -5.5 -4.56597 | CTGCGACGGCCATAC CGGGA ATA TCCTG TTTTTCGAGCAACGG ampR 2631677 - 2632561 + | transcriptional activator protein TERM 2969 2632656 - 2632628 - T 76 -9.7 -3.34517 | gap 1, overlap 2632626 ATCTCTTCTGAAACA GTGGCCTATTGG AGGATA CCAA-AGGCCAC CTACAAGTAAATTAG YE2442 2633324 - 2632668 - | putative inner membrane protein YE2443 2633874 - 2633539 - | hypothetical protein YE2444 2634101 - 2634670 + | hypothetical protein YE2445 2635907 - 2634688 - | transposase YE2447 2636509 - 2635919 - | putative type III secreted effector protein agaR 2637751 - 2636942 - | DNA-binding transcriptional regulator AgaR TERM 2970 2639093 - 2639070 - H 76 -11 -2.71712 | opp_overlap 2639067 2639060, overlap 2639069 CTTGTGCGGTTAAAT GTTACCCGGC CATT GTCGGGTAAC GCCGTTTATCCGCTA TERM 2971 2639384 - 2639374 - g 77 -6.8 -4.61231 | opp_overlap 2639372 2639374 CTACACCGTCAAAAA GGGT GAT ACCC TCTATTTTATCGCCT YE2451 2639222 - 2639968 + | putative lipoprotein TERM 2972 2640054 - 2640037 - f 84 -11.3 -3.09635 | opp_overlap 2640035 2640033, overlap 2640024 ATGCCGATCAGTTAA GGATCGG TTGA CCGATCC AGTGATTGTGTAAGA TERM 2973 2640071 - 2640095 + F 91 -5 -5.61596 | opp_overlap 2640071 GTGATTGTGTAAGAA TCCAGAAATG TTCTT CGTTTCCGGA TTTTTTTATGCACAT YE2452 2640103 - 2640889 + | transposase for insertion sequence element IS1665 TERM 2974 2640895 - 2640868 - T 100 -17.2 -5.14163 | opp_overlap 2640863 2640862 2640862 AGCCAGGAACAAAAA TGCCAGTCAGTT GCTT AACTGACTGGCA TTACCCTGTTTAGGA YE2454 2641592 - 2640954 - | hypothetical protein TERM 2975 2641755 - 2641739 - R 70 -3.6 -4.75372 | overlap 2641740 AGGATTTACCAAAAA CTCGCC CGTGT GGCGAC TGAGGTAGAAGACCT YE2455 2642227 - 2641862 - | hypothetical protein YE2457 2643197 - 2642538 - | hypothetical protein YE2458 2643965 - 2643393 - | hypothetical protein TERM 2976 2643520 - 2643533 + g 71 -6.7 -4.14739 | TCATGCGTTTCTGTG TGGCT AATA AGCCA TTTTCCCCTCACTAC YE2459 2645335 - 2643965 - | N-formimino-L-glutamate deiminase hutC 2645484 - 2646251 + | GntR family transcriptional regulator TERM 2977 2646676 - 2646694 + G 71 -10.2 -2.8547 | opp_overlap 2646676 2646677 TGAGCTATGCAGAAA TTGCCGCC AAT GGCGGCGG TATCGTGTCAACAGT TERM 2978 2647048 - 2647070 + G 75 -6.2 -4.56597 | overlap 2647050 2647052 AGCATCTGGCATTTT CACTCGCTCA AGT TGAGCGTGTA TTTTTAGCGGCACAG TERM 2979 2647050 - 2647068 + G 73 -8.8 -3.90048 | overlap 2647048 2647052 CATCTGGCATTTTCA CTCGCTCA AGT TGAGCGTG TATTTTTAGCGGCAC TERM 2980 2647052 - 2647066 + G 74 -10 -3.53855 | overlap 2647050 2647048 TCTGGCATTTTCACT CGCTCA AGT TGAGCG TGTATTTTTAGCGGC hutI 2646387 - 2647607 + | imidazolonepropionase hutG 2647604 - 2648413 + | putative N-formylglutamate amidohydrolase TERM 2981 2648465 - 2648482 + T 100 -8.3 -5.46657 | opp_overlap 2648465 TTTAAATGCAAAAAA GGCAGGG ATAA CCCCGCC TTTTTTATTCACCTA TERM 2982 2648482 - 2648465 - T 100 -10.5 -5.22039 | opp_overlap 2648465 TTTAAATGCAAAAAA GGCAGGG ATAA CCCCGCC TTTTTTATTCACCTA YE2463 2649618 - 2648536 - | outer membrane porin protein TERM 2983 2649390 - 2649415 + g 72 -11.1 -2.63941 | overlap 2649389 2649386 2649394 CAGCAACGTTATATT CCCACTGGCCG AAAC CGGTCAGTTGG CTATTGATTTGTGTT TERM 2984 2649685 - 2649695 + r 76 -2.6 -5.37345 | opp_overlap 2649685, overlap 2649679 TTAGCCTCATAAAAG TTAA CTT TTAA TTTTTTATAGTTACC astE 2651336 - 2650344 - | succinylglutamate desuccinylase astB 2652744 - 2651401 - | succinylarginine dihydrolase astD 2654253 - 2652787 - | succinylglutamic semialdehyde dehydrogenase TERM 2985 2653261 - 2653271 + g 82 -5.4 -5.01732 | overlap 2653257 CAGCAAATGTTGCTG TGCT GCC AGCA TTTTTTCAGCCGCTT astA 2655302 - 2654265 - | arginine succinyltransferase argM 2656604 - 2655360 - | bifunctional succinylornithine transaminase/acetylornithine transaminase TERM 2986 2655712 - 2655698 - G 80 -7.1 -4.62984 | TGATGAGAGATAAAA CGGTG CCCGC CACCG CACAAGCTAATGGGT YE2470 2658646 - 2657213 - | GntR family regulatory protein TERM 2987 2659069 - 2659082 + G 75 -3.7 -5.01546 | TGGCCTACCAATTTG GCACC AACT GGAGC TTTTTCTCTGAATTT TERM 2988 2659258 - 2659303 + G 71 -6.9 -4.24123 | gap 1 GCACACTCATGTCAA CCTTCTGGATTCTGGCTTCCAA TAG TTGGATGC-AGACACCACAAGG TTTTGAAGTTATTAA YE2471 2658831 - 2660279 + | putative cytochrome oxidase subunit YE2472 2660282 - 2661289 + | putative cytochrome oxidase subunit TERM 2989 2662260 - 2662250 - g 87 -6.8 -5.1523 | opp_overlap 2662250 2662244, overlap 2662244 CTTACAACAGAAAAA CCAG GTG CTGG CGTTTCTTTATCACA narR 2661522 - 2663303 + | nitrate/nitrite sensor protein NarX YE2474 2664297 - 2663341 - | transcriptional regulator CysB-like protein TERM 2990 2663464 - 2663452 - G 77 -6.3 -4.63748 | AAAGAACCAAATAAA GTTAC GTT GTAAC TGACCTCGTTTTAAT TERM 2991 2663881 - 2663897 + g 74 -6.5 -4.37211 | overlap 2663892 ATCAGCCTCACCGGA TTGCAGC ATC GCCGCAA TTTCTTGTGGATTTC TERM 2992 2664551 - 2664524 - H 71 -8.7 -3.33769 | opp_overlap 2664523 ACAAGAATAAAATCA GCTATATTAAA TAACTT TTTAATATAGC ACTTTGCCGTTAGAC YE2475 2664665 - 2665831 + | putative membrane transport protein YE2476 2666020 - 2666856 + | hypothetical protein TERM 2993 2666882 - 2666904 + F 75 -7.1 -4.31412 | opp_overlap 2666878 2666882 TATCTGTAAAATCAA TGGACATTA TCCTC TGATGTCCA TTTTGCTGACTCTTT TERM 2994 2667256 - 2667268 + G 73 -7.7 -4.08064 | GCTTTCAGTGTGGTA CGTCA TGC TGACG TTTTGGCACACCGTT chaA 2667076 - 2668185 + | calcium/sodium:proton antiporter TERM 2995 2668251 - 2668227 - T 100 -13.6 -4.00526 | opp_overlap 2668227 AAGGGGATAAGCAAA GGGCAAGTGC TTATC GCACCTGCCC TTTTTTATCGGGTCA TERM 2996 2668227 - 2668251 + T 100 -11.4 -5.26316 | opp_overlap 2668227 AAGGGGATAAGCAAA GGGCAAGTGC TTATC GCACCTGCCC TTTTTTATCGGGTCA phoH 2669073 - 2668285 - | hypothetical protein YE2479 2669461 - 2669141 - | hypothetical protein YE2480 2670313 - 2669606 - | putative acetyltransferase hmsS 2670996 - 2670529 - | haemin storage system, HmsS protein hmsR 2672327 - 2670993 - | N-glycosyltransferase PgaC hmsF 2674230 - 2672317 - | haemin storage system, HmsF protein hmsH 2676821 - 2674353 - | outer membrane protein PgaA TERM 2997 2675491 - 2675507 + g 85 -5.1 -5.24129 | TTAGCGGGTGCGGTG CTGGATA GCG TCTCCAG TTTTTTCTGGGCGGC TERM 2998 2677157 - 2677147 - R 74 -6.8 -4.25873 | opp_overlap 2677146 GTTCTACAAAAAAGA GCGT ATG ACGC GGTTTCAGGCCTGTT TERM 2999 2677453 - 2677427 - R 88 -6.7 -5.18355 | opp_overlap 2677427 TCTAAAAATTAAAAA TAGACTCTTTT AAAAA ACAAGAGTCTA TTTAGGAATGAATTT YE2485 2678717 - 2677500 - | putative peptidase TERM 3000 2677738 - 2677698 - G 100 -15.5 -4.59773 | TTCCAGCCCCAAAAA CACCCCATCACCGTGGCCA AGA TGACCACGGTGATAATGCG GTAAACCAGCCTTTT YE2486 2679535 - 2678768 - | ferric iron reductase involved in ferric hydroximate transport TERM 3001 2679498 - 2679474 - G 75 -8 -4.1822 | gap 1, opp_overlap 2679474 GTGCAGGCGAACAAA CTGGCGATTTC ATCA GAAATCGC-AG TTGTTGAAGGGTAAA YE2487 2680319 - 2679693 - | hypothetical protein TERM 3002 2680320 - 2680305 - G 74 -2.6 -5.00884 | gap 1, overlap 2680307 ATCGTTCTCAAAAAA TA-GACG GGT CGTCATA ATCATTATCCTTTTA TERM 3003 2680888 - 2680865 - g 80 -12.4 -2.79183 | overlap 2680867 2680871 GTCATTCGGATTACA GACCAACCCC CTCC GGGGATGGTC GGGCGGCAACTGATG YE2488 2680409 - 2681341 + | Lys family transcriptional regulatory protein tehB 2682261 - 2681392 - | tellurite resistance protein TehB TERM 3004 2681742 - 2681757 + g 71 -2.6 -4.88228 | gap 1, overlap 2681736 TGTTATAGGTATTAG CGG-TAA TAT TTAGCCG TTTTTCCTGTTCAAT YE2490 2682720 - 2682406 - | putative cytochrome YE2491 2683169 - 2682720 - | putative thioredoxin YE2492 2683911 - 2683198 - | ABC transporter, ATP-binding protein YE2493 2685036 - 2683915 - | hypothetical protein TERM 3005 2684168 - 2684184 + g 77 -6.5 -4.56597 | overlap 2684169 CGGATAATGTCACCA CCACTGG CTC CCAGTGC TTTTTGCAGAGCAAA TERM 3006 2684169 - 2684183 + g 73 -10 -3.33744 | overlap 2684168 GGATAATGTCACCAC CACTGG CTC CCAGTG CTTTTTGCAGAGCAA YE2494 2686354 - 2685062 - | hypothetical protein TERM 3007 2686085 - 2686075 - G 77 -4 -5.0538 | opp_overlap 2686075 TGTTACGCCAAAAAA TATC TTT GATA TTGGGTAATTCAGCC YE2495 2687760 - 2686357 - | hypothetical protein TERM 3008 2686695 - 2686683 - G 77 -4.1 -5.12068 | TAGACGGAATAAAAA TATGC ACC GCACA GGCAACACAGATCAC TERM 3009 2687391 - 2687375 - G 72 -10.1 -2.95919 | overlap 2687374 ACGACCCAAGCAAAT GCCACCA CAA TGGCGGC CAGATTAAGTAGCAA TERM 3010 2687887 - 2687860 - R 100 -11.3 -5.02323 | TTATCATAAAGAAAA GCCGCGACAAC GATGTT GTCATCGCGGC CAGTGCTATCAATTC YE2496 2688423 - 2687896 - | hypothetical protein TERM 3011 2688372 - 2688359 - G 78 -8.1 -4.35524 | TCTTTAAAGGCAAAA GCAGC AGGT GCTGC AAAAATGCTGGCAAT YE2497 2690441 - 2688504 - | hypothetical protein YE2498 2690615 - 2691133 + | hypothetical protein TERM 3012 2691202 - 2691171 - T 91 -7.4 -5.40072 | gap 2, opp_overlap 2691171 TTTTGGCTAAAAAAA CTGACAG-G-GCCG TATTCG CGGCACACTGTCAG TTCATAATAAATGGT YE2499 2692890 - 2691250 - | hypothetical protein YE2500 2694008 - 2693001 - | glutaminase TERM 3013 2693751 - 2693741 - G 71 -4 -4.76892 | AGACCAAGGCAAAAA CAAA AGG TTTG GAGACACTCATGATG TERM 3014 2694056 - 2694066 + r 71 -6.8 -4.17048 | TCCTGTCTTTCTTTT GCCT GTA AGGC TTATTTTAAGCGGCA YE2501 2695354 - 2694575 - | hypothetical protein YE2502 2695980 - 2695357 - | putative aldolase YE2503 2697284 - 2695977 - | hypothetical protein TERM 3015 2697284 - 2697294 + g 78 -5.4 -4.99035 | opp_overlap 2697284 AGATTCCATGACACA TGCT GAT AGCA TTTTTGTGTGAGTCA TERM 3016 2697846 - 2697831 - g 100 -9 -4.88736 | opp_overlap 2697843 CAGCAGCCAGAAAAA CGCCAT TGGT ATGGCG GCAGCGCTGCATATT YE2504 2697592 - 2698371 + | DeoR family transcriptional regulator TERM 3017 2698663 - 2698649 - g 73 -3.4 -4.98531 | overlap 2698651 GCTGGAAAGCAAAAA GTGCCG TTA CGACTC AGTACATCTATCACA YE2505 2698616 - 2700292 + | sensory histidine kinase DcuS TERM 3018 2700762 - 2700747 - g 74 -2.6 -5.0538 | gap 1, overlap 2700756 GTCGAGCGCAAAAAA TTA-CCC AAA GGGCTAA CAGCGCAAACACTAC TERM 3019 2700934 - 2700945 + G 73 -7.2 -4.17296 | TTCTGTATGGCGCAA CCGG CCGG CCGG TTTATCTCTATAAAC YE2506 2700285 - 2701004 + | DNA-binding transcriptional activator DcuR TERM 3020 2701067 - 2701038 - T 70 -9.4 -2.73542 | opp_overlap 2701035 2701038 2701042, overlap 2701042 CTTAATTCTCAATGA CAAACGGCATCC GATAAA AAATGCCGTTTG TTATGCTATTACTCA YE2507 2702474 - 2701116 - | citrate/sodium family symporter ansP 2703582 - 2705087 + | L-asparagine permease TERM 3021 2705142 - 2705097 - T 82 -5.6 -5.06451 | gap 1, opp_overlap 2705101 2705105, overlap 2705099 2705101 CAGTAGGTTAAAAAA GACATTCAGCCCGT-AGCTTG ATAAA CAAACTTACGGGCTAAATTTA ACGCGAATACGGCTA TERM 3022 2705140 - 2705099 - T 79 -8.2 -4.15748 | gap 1, opp_overlap 2705101 2705105, overlap 2705097 2705101 GTAGGTTAAAAAAGA CATTCAGCCCGT-AGCTTG ATAAA CAAACTTACGGGCTAAATT TAACGCGAATACGGC TERM 3023 2705138 - 2705101 - T 84 -10.8 -3.66769 | gap 1, opp_overlap 2705101 2705105, overlap 2705099 2705097 AGGTTAAAAAAGACA TTCAGCCCGT-AGCTTG ATAAA CAAACTTACGGGCTAAA TTTAACGCGAATACG YE2509 2705613 - 2705236 - | hypothetical protein YE2510 2705873 - 2705622 - | hypothetical protein YE2511 2706166 - 2707182 + | hypothetical protein TERM 3024 2707333 - 2707347 + F 81 -7.2 -4.69656 | overlap 2707335 ATTATTATATTTTGT GACTTA ATA TAAGTC TTTTATTAAGTAATT YE2512 2707420 - 2708592 + | putative inner membrane protein TERM 3025 2708678 - 2708697 + F 100 -10.8 -5.81412 | ATGGTAATTTTACCA GCTAGCAA AATT TTGCTAGC TTTTTTTTAGATAAA YE2513 2708773 - 2709585 + | putative hydrolase TERM 3026 2709684 - 2709662 - T 100 -9.8 -5.3658 | ATTATAAAAACAAAA TGGGGGCCAC ATG ATTGCCCCCA CAATGACATTGCATA yecC 2710474 - 2709719 - | putative amino-acid ABC transporter ATP-binding protein YecC TERM 3027 2709873 - 2709861 - G 74 -6.3 -4.32436 | ACATCACGAGCAAAA CTCAT TTC ATGAG TGACGATAACCATCG yecS 2711139 - 2710477 - | putative amino-acid ABC transporter (permease) TERM 3028 2711079 - 2711050 - G 76 -2 -5.21709 | overlap 2711052 TGCCAGACCAAAAAA CATCCCCCCCAG ACTAAG CTGGAGGGTAAA CCAGGCACCTTTCAA TERM 3029 2711077 - 2711052 - G 71 -6.8 -4.23988 | overlap 2711050 CCAGACCAAAAAACA TCCCCCCCAG ACTAAG CTGGAGGGTA AACCAGGCACCTTTC TERM 3030 2711120 - 2711101 - G 100 -12.2 -5.06816 | opp_overlap 2711100 ACCTTTCAATAAAAA TGGTGCTG AATC CAGCACCA GTTGAATACTTTCTT fliY 2711939 - 2711139 - | cystine transporter subunit YedO 2713050 - 2712058 - | D-cysteine desulfhydrase TERM 3031 2712714 - 2712689 - G 71 -4.7 -4.56883 | overlap 2712690 TCAACATTAAATAAA TCCAACAGCAA TCGA TTGCCATTGGT CAAATAATTTTCCTG TERM 3032 2713012 - 2713032 + g 71 -6.7 -4.19177 | opp_overlap 2713010 2713014 ATTACCGACCAAATC CAGGCGCGG AAA TTGCGCCAG TTTATGTTGAAGCGT TERM 3033 2713324 - 2713298 - R 100 -14.5 -5.2291 | gap 1, opp_overlap 2713317 AGAGGATAATAAAAA GCCCGGCTAAGG AGAA CCTT-GCCGGGC GCGGAATCATTGAAG fliZ 2713938 - 2713429 - | protein FliZ TERM 3034 2713900 - 2713915 + g 73 -2.4 -5.09225 | opp_overlap 2713901, overlap 2713901 ATAATCTTTTAAATA ACGGCT CAGC GGCCGC TTTTTTAACTGAAGT fliA 2714716 - 2713994 - | flagellar biosynthesis sigma factor TERM 3035 2714322 - 2714290 - G 79 -3.3 -5.21709 | CGTCATAGGAAAAAA GCTGGCTGTTGTTGG TGT CCAACAAGATCTGGC GGTACTCAGTCAAAT fliB 2716112 - 2714907 - | flagellin lysine-N-methylase TERM 3036 2716216 - 2716198 - R 100 -8.8 -4.80959 | opp_overlap 2716198 2716199 2716203 TAACCTAGAATAAAA GGCGGC AATAAAG GCCGCC TTTATAGTGCATTTA TERM 3037 2716198 - 2716216 + r 80 -8.8 -4.00476 | opp_overlap 2716198, overlap 2716199 2716203 TAACCTAGAATAAAA GGCGGC AATAAAG GCCGCC TTTATAGTGCATTTA fliC2 2717405 - 2716260 - | flagellin TERM 3038 2717571 - 2717553 - R 100 -11 -5.7946 | GCTGGAATAAAAAAA GCCCCCAT AAT ATGGAGGC TTGCAAGAATCAGCT YE2522 2718695 - 2717595 - | flagellin TERM 3039 2718861 - 2718843 - R 100 -11 -5.7946 | GCTGGAATAAAAAAA GCCCCCAT AAT ATGGAGGC TTGCAAGAATCAGCT fliC3 2719994 - 2718885 - | flagellin fliD 2720258 - 2721658 + | flagellar capping protein TERM 3040 2721766 - 2721786 + G 73 -10.3 -3.14683 | overlap 2721769 TCGTGATGCTATTCG ACGGGGCGC AGA GCGCCCTGG TTCGTGCCCGCATCT TERM 3041 2721769 - 2721783 + G 81 -12.8 -2.77899 | overlap 2721766 TGATGCTATTCGACG GGGCGC AGA GCGCCC TGGTTCGTGCCCGCA fliS 2721669 - 2722067 + | flagellar protein FliS fliT 2722079 - 2722441 + | flagellar biosynthesis protein FliT YE2527 2722716 - 2723585 + | AraC family transcriptional regulator TERM 3042 2723595 - 2723610 + F 74 -7.6 -4.02953 | overlap 2723594 ATTTAGGGCCTGGAT GAGTCT GCTC AGACTC TATTTTTGATCATTT TERM 3043 2724646 - 2724660 + G 83 -11.4 -3.50639 | opp_overlap 2724641 2724640 2724644, overlap 2724644 AAGACAGAACCTACC GCCTGG CAG CCAGGC TATTATTATAAATTC YE2528 2723915 - 2726869 + | putative chemotaxis protein YE2529 2726956 - 2727558 + | putative glycosidase YE2530 2727781 - 2727957 + | putative DNA-damage-inducible protein YE2531 2728425 - 2729084 + | hypothetical protein TERM 3044 2729285 - 2729274 - T 82 -3 -5.44837 | opp_overlap 2729274 AAAAAAATACAAAAA GATA ATAA TATC ATTGTGTGAAAAAGA YE2533 2729827 - 2729612 - | hypothetical protein TERM 3045 2729648 - 2729659 + g 75 -5.8 -4.59342 | GACCCTTTCTACCGT CTGG CGCA CCAG TTTGTTTCTCGTGGC TERM 3046 2730286 - 2730296 + r 77 -4.6 -5.08088 | opp_overlap 2730286 ATGTGCCTAACTAAA TCGG TGT CCGG TTTTTGTTGACCATT fliE 2730788 - 2730477 - | flagellar hook-basal body protein FliE TERM 3047 2731244 - 2731279 + G 73 -7.6 -4.06419 | gap 1 TCGCTATTCTTGTCG CGCTGATGTTATGGGCT AAA AGCCCAGATTATC-GCG TTCTTTATAGCAACC TERM 3048 2732726 - 2732706 - g 74 -2.6 -5.06414 | CCTGCGTAAGAAAAA TCAGCA GCGAGTAAG TGCTGA AGTTCAGGCCCAGCG fliF 2731117 - 2732817 + | flagellar MS-ring protein TERM 3049 2732859 - 2732839 - g 85 -6.1 -5.15969 | overlap 2732841 CCGGAACTGAAAAAA GCGCCATCA TGC TGATGACTC TGGGTGAAGACCATG fliG 2732814 - 2733806 + | flagellar motor switch protein G fliH 2733799 - 2734521 + | flagellar assembly protein H TERM 3050 2734788 - 2734800 + G 82 -10.5 -3.86346 | GTGGAAGGGATTGTG CCCGG CGC CCGGG TTTATGCACGCATCA TERM 3051 2735470 - 2735488 + G 77 -4.5 -4.87273 | overlap 2735468 GTAACGGGGTGTCCG GTGGTGG ATCGA TCACCGC TTTTTATACGGTATT fliI 2734554 - 2735885 + | flagellum-specific ATP synthase fliJ 2735975 - 2736421 + | flagellar biosynthesis chaperone fliK 2736550 - 2737776 + | flagellar hook-length control protein FliK fliL 2737967 - 2738437 + | flagellar basal body-associated protein FliL fliM 2738443 - 2739447 + | flagellar motor switch protein FliM fliN 2739440 - 2739856 + | flagellar motor switch protein FliN fliO 2740030 - 2740440 + | flagellar protein FliO fliP 2740503 - 2741189 + | flagellar biosynthesis protein FliP fliQ 2741201 - 2741470 + | flagellar biosynthesis protein FliQ fliR 2741473 - 2742255 + | flagellar biosynthesis protein FliR TERM 3052 2742634 - 2742594 - T 74 -6.8 -4.38744 | ACGGATAGAAAAGAA GGTATGTCACCCCAAACC TTAGT GGGAAAAGGTGACATACC AAAAAGTGTACCCGG TERM 3053 2742660 - 2742640 - T 71 -4 -4.84527 | overlap 2742658 GTGACATACCAAAAA GTGTACCC GGTTT AAGTACAC CTAAGAGGTAACCTG TERM 3054 2742692 - 2742672 - T 77 -10.4 -3.19789 | opp_overlap 2742672 ACACCTAAGAGGTAA CCTGCGGG GCTGA CCCACAGG TATATACCCGTCATA flgL 2743751 - 2742771 - | flagellar hook-associated protein FlgL TERM 3055 2743859 - 2743832 - R 70 -7.8 -3.68757 | gap 1, overlap 2743835 CCTAAAATGAGATAA GT-AGCGGCAG CAACGCC CTGCCGCTGAC CAAACTTAACCGCGC TERM 3056 2743855 - 2743835 - R 73 -9.7 -2.93752 | overlap 2743832 AAAATGAGATAAGTA GCGGCAG CAACGCC CTGCCGC TGACCAAACTTAACC flgK 2745529 - 2743865 - | flagellar hook-associated protein FlgK flgJ 2746775 - 2745852 - | peptidoglycan hydrolase TERM 3057 2746084 - 2746108 + g 71 -5 -4.63218 | gap 1, opp_overlap 2746091, overlap 2746091 GCCTCGACGTAGGAG CCATAAACCCG GAAG CGGGCTT-TGG TTTTCTTCGCCACAC flgI 2747890 - 2746814 - | flagellar basal body P-ring protein flgH 2748630 - 2747947 - | flagellar basal body L-ring protein TERM 3058 2748743 - 2748726 - R 88 -12.7 -2.71011 | opp_overlap 2748717 2748716 ATTCTGCGGCAATCA GGGGGCA TCAT TGCCCCC CGAGAGCGGATTTAC YE2555 2749408 - 2748755 - | flagellar basal-body rod protein FlgG flgF 2750319 - 2749564 - | flagellar basal body rod protein FlgF TERM 3059 2750109 - 2750142 + g 84 -13.2 -2.63102 | GACCGCTGTAGTTCA TCGACCCCTGGC TGATATCTAC GCCGGGGGTCGA TGCTGTGACCATGGT flgE 2751600 - 2750341 - | flagellar hook protein FlgE TERM 3060 2751514 - 2751532 + g 71 -8.8 -3.63515 | GGCTTTAAAACCTGA CGTCGCCG AGT TGGCGATG TTGTTACCGATCACA flgD 2752519 - 2751944 - | flagellar basal body rod modification protein TERM 3061 2752486 - 2752496 + g 75 -3.2 -5.1287 | TTTGCATTGGGTTGG TCGG ATC CTGA TTTTTTAACTGTGCC flgC 2753050 - 2752646 - | flagellar basal body rod protein FlgC TERM 3062 2752844 - 2752827 - G 70 -7.7 -3.92324 | opp_overlap 2752827 2752832, overlap 2752828 GGTTGGAAGACCAAA CGATCCG GTGC CGGATCA TCGATTATCTGTGCC flgB 2753469 - 2753056 - | flagellar basal body rod protein FlgB flgA 2753731 - 2754333 + | flagellar basal body P-ring biosynthesis protein FlgA TERM 3063 2754615 - 2754604 - g 70 -2.2 -4.8622 | CTGCTCAATCAAAAA CACC GGTA AGTG GTACTGAGGTTAAAT flgM 2754540 - 2754797 + | anti-sigma28 factor FlgM flgN 2754849 - 2755289 + | flagella synthesis protein FlgN invA 2757799 - 2755292 - | invasin TERM 3064 2756753 - 2756740 - G 75 -8.1 -4.26351 | CACTAACGGAATAAA CCTGC CCCG GCAGG CCGGAGAGTACGGCG flhE 2758732 - 2758310 - | flagellar protein FlhE precursor flhA 2760810 - 2758732 - | flagellar biosynthesis protein FlhA flhB 2761961 - 2760810 - | flagellar biosynthesis protein FlhB TERM 3065 2761204 - 2761217 + g 70 -9.5 -3.21218 | GCCATCATCCGCCGG CGGGC CATG GCCCG TTGCTGCTGGCGGAT TERM 3066 2763049 - 2763064 + G 74 -9 -3.70902 | AAGGCACGATTATCG CCGTCA TTGA TGACGG TTTCGATATGGGCCA TERM 3067 2763222 - 2763244 + G 100 -17.8 -2.80252 | overlap 2763220 2763219 GATGGCCGCTATGGT GCCTCTGGTG TGG CACCAGAGGC TAATCTTATGCCAAT hreP 2762376 - 2764025 + | subtilisin/kexin-like protease cheZ 2764754 - 2764110 - | chemotaxis regulator CheZ TERM 3068 2764160 - 2764173 + g 70 -2.3 -4.87786 | overlap 2764151 GGTCTTGGCTGGCAA TGACG CCAG CGCCA TTTTTATCCAGTTGC cheY 2765153 - 2764764 - | chemotaxis regulatory protein CheY cheB 2766394 - 2765345 - | chemotaxis-specific methylesterase TERM 3069 2765817 - 2765805 - G 71 -9.1 -3.51232 | CGCTCTGCAAATGAA CGGGT AAA ACCCG GTGGCATATGCTGTG cheR 2767221 - 2766394 - | chemotaxis methyltransferase CheR TERM 3070 2766521 - 2766539 + g 71 -4.5 -4.55697 | opp_overlap 2766517 2766513 2766521 AAAGGAACAAAGCGA CGCAGAA TGCGC TCCTGCG TTTCTTTATCAAAAT TERM 3071 2767087 - 2767102 + g 75 -10.4 -3.32294 | opp_overlap 2767081, overlap 2767101 CCCCAGCAACCTCAA CCGCCT CACC AGGCGG TTATAGACCATTTCC YE2573 2768920 - 2767283 - | methyl-accepting chemotaxis protein cheD 2770778 - 2769105 - | methyl-accepting chemotaxis protein cheW 2771557 - 2771060 - | purine-binding chemotaxis protein cheA 2773792 - 2771738 - | chemotaxis protein CheA motB 2775047 - 2773803 - | flagellar motor protein MotB TERM 3072 2773937 - 2773949 + g 71 -9.1 -3.54543 | GTGGTGCTGTTGCAG GCGGT GCC ACCGC TTTCACAGACTCAGT motA 2775931 - 2775044 - | flagellar motor protein MotA TERM 3073 2775208 - 2775222 + g 80 -8.6 -4.40993 | overlap 2775218 AAAGCAACGTCACCT TGATGC ACT GCATCA TTTTGGTGGTTTCTG flhC 2776650 - 2776069 - | transcriptional activator FlhC flhD 2777013 - 2776654 - | transcriptional activator FlhD TERM 3074 2777164 - 2777152 - H 86 -7.7 -4.66953 | opp_overlap 2777160 GCAACATTGCAAAAA TACCG TTT CGGTA TGAAATGACATGTCG TERM 3075 2777291 - 2777326 + H 70 -5.6 -4.2535 | gap 1, overlap 2777292 2777325 GCCCAACTCTACTCC CGAATCGTTAG-CACAT ACA ATGTGACTAGTGATTCA TTTTAAATGTAATGT TERM 3076 2777889 - 2777900 + H 73 -5.8 -4.55128 | opp_overlap 2777898, overlap 2777898 GTTTCGCCTATCTCG CCCT AACC AGGG TTTTCATTTAACCCT YE2583 2778028 - 2778447 + | universal stress protein UspC TERM 3077 2779264 - 2779250 - g 88 -7.1 -5.03945 | opp_overlap 2779250 2779249 CAACAACTAGAAAAA GCCTG TTCAG CAGGC ATTGATATTTATTAC TERM 3078 2779397 - 2779385 - g 72 -10.5 -2.93113 | opp_overlap 2779384 AACGACACAGAATTA CCGGG CGG CCCGG ATCGGTTACCGCTGC YE2584 2778611 - 2779645 + | putative oxidoreductase TERM 3079 2779687 - 2779646 - T 100 -11.8 -3.83844 | gap 1, opp_overlap 2779652 2779655, overlap 2779649 GTCAGTAATGAATAA TCATCATAATTCCG-GGCC TATTT GGCCCCGGAATTATGATAT AAACGTCAATATACG TERM 3080 2779684 - 2779649 - T 100 -15.7 -2.99348 | gap 1, opp_overlap 2779652 2779655, overlap 2779646 AGTAATGAATAATCA TCATAATTCCG-GGCC TATTT GGCCCCGGAATTATGA TATAAACGTCAATAT TERM 3081 2779652 - 2779681 + T 80 -11.6 -2.62983 | gap 1, opp_overlap 2779649 2779646, overlap 2779655 AATGAATAATCATCA TAATTCCG-GGCC TATTT GGCCCCGGAATTA TGATATAAACGTCAA TERM 3082 2779655 - 2779678 + T 73 -8.9 -3.4678 | gap 1, opp_overlap 2779649 2779646, overlap 2779652 GAATAATCATCATAA TTCCG-GGCC TATTT GGCCCCGGAA TTATGATATAAACGT mgtB 2782324 - 2779706 - | Mg(2+) transport ATPase protein B TERM 3083 2782301 - 2782328 + g 77 -6.4 -4.65168 | gap 1, opp_overlap 2782325, overlap 2782303 GTTCAAATTAGCATT CAGCTTGGA-CAA AGT TTGATCCAAGCTA TTTTTAGCCTCTAAT TERM 3084 2782303 - 2782326 + g 76 -9 -3.93817 | gap 1, opp_overlap 2782325, overlap 2782301 TCAAATTAGCATTCA GCTTGGA-CAA AGT TTGATCCAAGC TATTTTTAGCCTCTA TERM 3085 2782483 - 2782495 + r 75 -3.3 -5.23644 | overlap 2782484 ATGTGCCGAACTATT ATGGC GCT GCCAA TTTTTATATTTAATT mgtC 2783335 - 2782625 - | Mg(2+) transport ATPase protein C TERM 3086 2782995 - 2782975 - G 73 -8.3 -3.88232 | overlap 2782976 TGGCGCATAGAATAA CTGCTGTTG CCG CAACAGCAT TCCAATACAATCCCA TERM 3087 2782994 - 2782976 - G 78 -11.8 -2.92618 | overlap 2782975 GGCGCATAGAATAAC TGCTGTTG CCG CAACAGCA TTCCAATACAATCCC YE2588 2784461 - 2786200 + | putative methyl-accepting chemotaxis protein TERM 3088 2786254 - 2786282 + T 87 -5.3 -5.45652 | gap 1, opp_overlap 2786254 2786249 AAGCTGACAACAAAA CCGGAGACAAGG CTCACA CCTTC-CTCCGG TTTTTTATTGCCGCT TERM 3089 2786282 - 2786254 - T 100 -8.2 -4.78839 | gap 1, opp_overlap 2786254, overlap 2786249 AAGCTGACAACAAAA CCGGAGACAAGGC TCAC ACCTT-CCTCCGG TTTTTTATTGCCGCT YE2589 2786524 - 2786333 - | hypothetical protein TERM 3090 2786758 - 2786731 - R 83 -11.4 -2.95192 | opp_overlap 2786738, overlap 2786738 TTGAACGCCAGAAAG TAAAAAACCCGC CTTG GCGGGTTTTTTT ATAATCAGCCAAAGG TERM 3091 2786738 - 2786751 + r 100 -9.5 -5.67063 | opp_overlap 2786738 2786731 CCAGAAAGTAAAAAA CCCGC CTTG GCGGG TTTTTTTATAATCAG TERM 3092 2786751 - 2786738 - R 100 -9.5 -5.42514 | opp_overlap 2786738, overlap 2786731 CCAGAAAGTAAAAAA CCCGC CTTG GCGGG TTTTTTTATAATCAG cspC2 2786990 - 2786778 - | cold shock-like protein CspC2 lacI 2787472 - 2788506 + | lac repressor lacZ 2788683 - 2791835 + | beta-D-galactosidase TERM 3093 2792034 - 2792061 + T 100 -17.2 -5.14163 | CACCCTATTGGGTAA TGCCAGTCAGTT AAGC AACTGACTGGCA TTTTTGTTCCTGGCT YE2594 2792826 - 2792040 - | transposase for insertion sequence element IS1665 TERM 3094 2792759 - 2792726 - G 79 -10.3 -3.66288 | opp_overlap 2792726, overlap 2792727 GATTCGGCAAGACAA CGGGAGATGAGCTCG GGGT CGAGGTAATCTCCCA GTGTGGTCAGTGGGT TERM 3095 2792758 - 2792727 - G 76 -11.6 -2.79452 | opp_overlap 2792726, overlap 2792726 ATTCGGCAAGACAAC GGGAGATGAGCTCG GGGT CGAGGTAATCTCCC AGTGTGGTCAGTGGG TERM 3096 2792834 - 2792858 + H 73 -8.6 -3.61398 | opp_overlap 2792834 ATGTGCATAAAAAAA TCCGGAAACG AAGAA CATTTCCGGA TTCTTACACAACCAC TERM 3097 2792858 - 2792834 - H 100 -10.8 -5.61596 | opp_overlap 2792834 ATGTGCATAAAAAAA TCCGGAAACG AAGAA CATTTCCGGA TTCTTACACAACCAC TERM 3098 2792875 - 2792892 + H 84 -11.3 -3.09635 | opp_overlap 2792873 TCTTACACAACCACT GGATCGG TCAA CCGATCC TTAACTGATCGGCAT YE2595 2793089 - 2794099 + | Zinc-binding dehydrogenase ylaC 2794337 - 2794870 + | hypothetical protein TERM 3099 2794882 - 2794917 + F 100 -17.8 -4.70583 | opp_overlap 2794876 2794889 ATAATTATAGGTATC CAGCATACTCTGCTGA ATCC TCAGTAGGGTATGCTG TTTTGTATTCCTAAC YE2597 2795126 - 2795584 + | transcription regulator AsnC TERM 3100 2795771 - 2795747 - g 75 -7.8 -4.16251 | AGATAATGTGCAAAA CTCCAGTACC GTCGA GGCTCTGGAG CAAGGTAAAGTACTT TERM 3101 2796457 - 2796436 - g 70 -8 -3.83026 | GTTTTTCAGATCAAA CCCCCCAT GCAGCG ATGGGAGG ACAATTTATGTTAGA YE2598 2795739 - 2796566 + | hypothetical protein TERM 3102 2796587 - 2796633 + F 100 -21.9 -3.72576 | opp_overlap 2796602, overlap 2796588 2796602 CGCTTTCTGTTGTCG AGTGCCTACTGAAAATCCGCT GGCAA AGTGGATTTTCAGTAGGCACA TTTCCTAAAAAAAAA TERM 3103 2796588 - 2796632 + F 100 -25.4 -2.83403 | opp_overlap 2796602, overlap 2796587 2796602 GCTTTCTGTTGTCGA GTGCCTACTGAAAATCCGCT GGCAA AGTGGATTTTCAGTAGGCAC ATTTCCTAAAAAAAA YE2599 2796772 - 2796984 + | hypothetical protein TERM 3104 2797079 - 2797111 + T 100 -15 -6.04953 | TTAGTCACTTTTTCG CCGGGGCTTTCT ATATTTACC AGAAAGCCCCGG TTTTTTTATTTATAT YE2600 2798576 - 2797251 - | phosphoanhydride phosphorylase TERM 3105 2798829 - 2798813 - H 93 -12.3 -3.21595 | opp_overlap 2798810 2798807, overlap 2798801 AACCCGCACTATCAA TCCGGTC ACT GACCGGA CAGTATTTAGCGCAA glgC 2798907 - 2800184 + | glucose-1-phosphate adenylyltransferase TERM 3106 2800417 - 2800400 - T 86 -9.1 -4.30014 | opp_overlap 2800400 CTTATTAATTCAAAA GCGGCCA TAAT TGACCGC TTTTCGTGTTGGCTG TERM 3107 2800400 - 2800417 + T 76 -6.9 -4.43681 | opp_overlap 2800400 CTTATTAATTCAAAA GCGGCCA TAAT TGACCGC TTTTCGTGTTGGCTG YE2602 2800956 - 2800444 - | putative periplasmic chaperone protein YE2603 2801295 - 2802812 + | putative sugar kinase YE2604 2802809 - 2803825 + | putative oxidoreductase YE2605 2804794 - 2803850 - | putative sugar kinase YE2606 2805805 - 2804804 - | putative sugar permease TERM 3108 2805312 - 2805281 - G 72 -10.9 -2.53903 | opp_overlap 2805307, overlap 2805280 2805278 2805277 CCCGGCAAAAATCAC CGGTAAGGGCATA TTGGCC CATGCCCCCACCG CCAGATGGTGATATT YE2607 2806830 - 2805814 - | putative membrane permease protein YE2608 2808395 - 2806827 - | putative sugar transport, ATP-binding protein YE2609 2809392 - 2808400 - | ABC transporter, substrate binding component TERM 3109 2809363 - 2809376 + g 75 -3.7 -5.05116 | opp_overlap 2809353, overlap 2809356 AAGACCGACTGCTAT CGCGG TATT CAGCG TTTTCTTCTTTGTCA YE2610 2809929 - 2810732 + | hypothetical protein TERM 3110 2811999 - 2811987 - T 70 -5.5 -4.56597 | opp_overlap 2811987, overlap 2811989 GCCGCGGGGCAAAAA TGCGA ATG CCGCA TATCGTCCCCCTCTC TERM 3111 2812473 - 2812445 - T 74 -10.3 -2.72829 | opp_overlap 2812450, overlap 2812444 2812447 CACACTCTGGCAAAT TACCACCACCTCC ACA GGAGGTGGTTCTA TATAGACTTTTATCA TERM 3112 2812468 - 2812447 - T 73 -10.1 -2.90813 | opp_overlap 2812450, overlap 2812445 2812444 CACTCTGGCAAATTA CCACCACCT CCAC AGGAGGTGG TTCTATATAGACTTT TERM 3113 2812450 - 2812468 + T 100 -14.6 -3.60814 | opp_overlap 2812447 2812445 2812444 TCTGGCAAATTACCA CCACCTCC ACA GGAGGTGG TTCTATATAGACTTT irp9 2813911 - 2812607 - | salicylate synthase Irp9 irp8 2815219 - 2813939 - | putative signal transducer irp7 2817014 - 2815212 - | inner membrane ABC-transporter YbtQ TERM 3114 2815482 - 2815518 + g 85 -8.1 -4.66163 | gap 2, overlap 2815479 GCTTTCAATATCCAG CGCGGCGGTCGGTTCAT CGAGA ATGA-C-GACCGGCGCG TTTTTCAATAACGCT TERM 3115 2815666 - 2815699 + g 72 -10.4 -3.01712 | GCTGCCTCTTCCACC TCC-TGTCGCGTCGCC TGTG GGCG-CGCGATACGGA TATTCGCCAGCAGCG TERM 3116 2816396 - 2816427 + g 71 -10.1 -2.91593 | overlap 2816396 2816399 CAACGATATCGCCGC TCAGACGCTGGTG CGCTTC CCCCAGCGTCTGC ATTTGTCGCCGCATC TERM 3117 2816396 - 2816428 + g 73 -8.5 -3.86346 | gap 1, overlap 2816396 2816399 CAACGATATCGCCGC T-CAGACGCTGGTG CGCTTC CCCCAGCGTCTGCA TTTGTCGCCGCATCG TERM 3118 2816939 - 2816904 - G 88 -13.4 -3.14881 | gap 1 GAATGCCGCCAGCAA CAGCGCCAGCATACTGC GCC GCAGCATCCTGGC-CTG ACTGCCAACGCTGGA irp6 2818803 - 2817001 - | lipoprotein inner membrane ABC-transporter TERM 3119 2818678 - 2818668 - G 77 -4.6 -4.85599 | TCCACGCCAGAAAAA GGAG CGC CCCC AGGCTGGTTAATGCC ybtA 2819095 - 2820054 + | transcriptional regulator YbtA TERM 3120 2820084 - 2820120 + F 100 -21.8 -3.6106 | opp_overlap 2820091, overlap 2820087 CCCTAAATTCCTCCC TGACAGAGGCCCGGAT ACCCC ATCCGGGCCTCTGTTA TTTCCGCCTGTTACC TERM 3121 2820087 - 2820117 + F 100 -21.3 -3.93658 | opp_overlap 2820091, overlap 2820084 TAAATTCCTCCCTGA CAGAGGCCCGGAT ACCCC ATCCGGGCCTCTG TTATTTCCGCCTGTT TERM 3122 2820113 - 2820091 - f 100 -15.6 -2.87132 | opp_overlap 2820087 2820084 TTCCTCCCTGACAGA GGCCCGGATA CCC CATCCGGGCC TCTGTTATTTCCGCC TERM 3123 2820169 - 2820138 - f 100 -15.2 -3.14132 | opp_overlap 2820133, overlap 2820145 2820159 TCCGCCTGTTACCAA CCCGAAACGGGCAT AAAT AAACCCGTTTCGGG TAGCATATAATTGTT TERM 3124 2820169 - 2820159 - f 87 -8.2 -4.55697 | opp_overlap 2820133, overlap 2820145 2820138 ACGGGCATAAATAAA CCCG TTT CGGG TAGCATATAATTGTT TERM 3125 2821333 - 2821343 + G 70 -2.4 -4.86001 | overlap 2821317 ACGCCAACAATGGCG CTGG CGA CCTG TTTTTCTGCCGTGCT TERM 3126 2821406 - 2821441 + G 81 -12.7 -2.72379 | gap 2 TTAACATCACCTTAT TCGACCGCCAGCCGCTG CACC CAGCGGTTGGC-G-CGA TGCTTGCCGACTTCA TERM 3127 2824520 - 2824492 - g 78 -6 -4.70659 | gap 1, opp_overlap 2824494 2824495, overlap 2824494 2824495 GGCGACATTGAAAAA CAG-GTTGCCGCC CTCT GGCAGCAACTCTT ATCGACTGGCAATGT TERM 3128 2824517 - 2824494 - g 76 -8.8 -3.96999 | opp_overlap 2824494 2824495, overlap 2824492 2824495 CGACATTGAAAAACA GGTTGCCGCC CTCT GGCAGCAACT CTTATCGACTGGCAA TERM 3129 2824495 - 2824516 + G 73 -10.1 -3.23393 | opp_overlap 2824495 2824494 2824492, overlap 2824494 GACATTGAAAAACAG GTTGCCGCC CTCT GGCAGCAAC TCTTATCGACTGGCA TERM 3130 2824516 - 2824495 - g 81 -12.3 -2.97476 | opp_overlap 2824494 2824495, overlap 2824494 2824492 GACATTGAAAAACAG GTTGCCGCC CTCT GGCAGCAAC TCTTATCGACTGGCA TERM 3131 2825429 - 2825413 - g 88 -7.2 -5.0133 | opp_overlap 2825414 2825417, overlap 2825414 CATCGGCTGAAAAAA CGGGCG GCTGA CGCCCA TCTCACCCCGTCGGC TERM 3132 2826068 - 2826022 - g 73 -7.9 -4.07568 | gap 1, overlap 2826024 GTGCCTCCCGTAAAA CACGCAGGGCA-ATGCGCAGAG CGCC CACCGCGCGTATGCCCTGAGCA CTCTCAGCCACACAT TERM 3133 2826066 - 2826024 - g 79 -10.5 -3.63744 | gap 1, overlap 2826022 GCCTCCCGTAAAACA CGCAGGGCA-ATGCGCAGAG CGCC CACCGCGCGTATGCCCTGAG CACTCTCAGCCACAC irp2 2820259 - 2826366 + | yersiniabactin biosynthetic protein TERM 3134 2826389 - 2826419 + F 78 -10.5 -3.33711 | gap 1, overlap 2826384 CAAACTGATTTTCCC CGGAACGCCATCGC GAAC GC-ATGGCGTTCCA TTGACTTTGTGAATC TERM 3135 2827378 - 2827338 - g 81 -12.5 -2.93073 | overlap 2827346 2827350 CGCGGTCAACAACGA CGGCAACAGAAAGGTCGGC TAT ACCGCCCCTTCCGTCGCAG GGCAACAGGCAGTCA TERM 3136 2827894 - 2827853 - g 86 -7.9 -4.84761 | gap 1, opp_overlap 2827860 2827861, overlap 2827856 2827857 ATAGCGGCAGAAAAA GTACCGCGCTGCTGCTCAGC GCC GCC-AGCGACAGCGCGTTGC GGCGGCTGGCGACGG TERM 3137 2827890 - 2827857 - g 75 -11.7 -2.58667 | gap 1, opp_overlap 2827860 2827861, overlap 2827856 2827853 CGGCAGAAAAAGTAC CGCGCTGCTGCTCAGC GCC GCC-AGCGACAGCGCG TTGCGGCGGCTGGCG TERM 3138 2828875 - 2828887 + G 77 -4.7 -4.84359 | CAGATGGCGCATCAG CTCGG CGC CCGCG TTTTTCTGGAGATGG TERM 3139 2831205 - 2831188 - g 78 -5.5 -4.96848 | gap 1 TGGCTCAGAGAAAAA GGCG-CGC GAC GCATCGCC CTGCTGGCGCAGCGC TERM 3140 2831255 - 2831272 + G 72 -11.3 -2.67747 | overlap 2831254 GCGACGTGGAGGGCG GGCAGAC GCGC GTCTGCC GTTGTGATGTGGGCG TERM 3141 2831683 - 2831663 - g 79 -11.1 -3.55444 | opp_overlap 2831640, overlap 2831664 CGGCCACGCCGGAAA TGCTGGCGA CGC TCGCCAGCC GTGGTATGGGCGCGT TERM 3142 2831682 - 2831664 - g 90 -14.6 -2.73124 | opp_overlap 2831640, overlap 2831663 GGCCACGCCGGAAAT GCTGGCGA CGC TCGCCAGC CGTGGTATGGGCGCG TERM 3143 2831846 - 2831836 - g 70 -2.4 -4.9725 | opp_overlap 2831836, overlap 2831822 AGCGCCACAGAAAAA GCCG CAA CGCC TGTCATTCCTCCTGC TERM 3144 2835656 - 2835636 - g 71 -7.5 -4.07885 | overlap 2835637 TATGGTGTCGCAAAA CCTGACGCT GCA AGCGGCAGA AACGTGGCTCGACAA irp1 2826454 - 2835939 + | yersiniabactin biosynthetic protein TERM 3145 2836183 - 2836227 + G 79 -10.6 -3.61715 | overlap 2836185 CCGTCGCCGGAGGAG CTGGTACGCAGCTTGCCAGA CACTT TCTGGCGCGCGGCGTACACG TTATTCAGGAGCATC TERM 3146 2836185 - 2836226 + G 76 -11.6 -2.76815 | gap 1, overlap 2836183 GTCGCCGGAGGAGCT G-GTACGCAGCTTGCCAGA CACTT TCTGGCGCGCGGCGTACAC GTTATTCAGGAGCAT TERM 3147 2836434 - 2836444 + G 73 -5.4 -4.48713 | CGACAGTTGCTCTAC TCCA CGC TGGA TTTGTTGTTGCTGGC irp3 2835936 - 2837036 + | yersiniabactin biosynthetic protein YbtU TERM 3148 2837127 - 2837171 + G 71 -7.3 -4.08974 | gap 2, overlap 2837126 CTGGCGGCAGCAGTA GCGCG-T-TTCGCCACTGG CGAGACAAT CAAGTGGCGAACAGCGCGC TTTCTCTGGTGACCT irp4 2837033 - 2837836 + | yersiniabactin biosynthetic protein YbtT TERM 3149 2838700 - 2838682 - g 72 -10.3 -3.04461 | opp_overlap 2838693, overlap 2838684 CAGGGAGTGGGAAGA CAGCGAC CTTTC GTCGCTG CGCGTCATTCAGGCA TERM 3150 2839395 - 2839370 - g 93 -6.7 -5.46276 | opp_overlap 2839370, overlap 2839371 AAGATAGACAAAAAA CGCCTGACGGC TCTC GCCGTCGACCG TTATCGCCATTCTGC TERM 3151 2839393 - 2839371 - g 70 -7.7 -3.85325 | gap 1, opp_overlap 2839370, overlap 2839370 AGATAGACAAAAAAC GCCTGACGGC TCTC GCCGTC-GAC CGTTATCGCCATTCT irp5 2837840 - 2839417 + | yersiniabactin siderophore biosynthetic protein TERM 3152 2839464 - 2839425 - f 90 -11.5 -3.72051 | overlap 2839426 2839429 2839450 CCCAATAAGTGCAAA CCGACCCGAAACAGGTT GAAATA AACCCGTTTCGGGTAGC ACCACTATTAGAAAT TERM 3153 2839463 - 2839426 - f 100 -15 -2.82749 | overlap 2839425 2839429 2839450 CCAATAAGTGCAAAC CGACCCGAAACAGGTT GAAATA AACCCGTTTCGGGTAG CACCACTATTAGAAA TERM 3154 2839460 - 2839429 - f 100 -15.3 -2.66593 | overlap 2839426 2839425 2839450 ATAAGTGCAAACCGA CCCGAAACAGGTT GAAATA AACCCGTTTCGGG TAGCACCACTATTAG TERM 3155 2839460 - 2839450 - f 87 -8.2 -4.43208 | overlap 2839429 2839426 2839425 ACAGGTTGAAATAAA CCCG TTT CGGG TAGCACCACTATTAG TERM 3156 2839749 - 2839730 - g 81 -12.8 -2.60244 | overlap 2839726 GCCGGAATTAAGCGA CGCCGGCG TTAC CGCCAGCG ACAAACTCCCCAGAG fyuA 2839548 - 2841569 + | pesticin/yersiniabactin receptor protein TERM 3157 2841581 - 2841601 + T 93 -11.2 -4.08945 | opp_overlap 2841581 CTGATTATTGTAAAA GGGATACC GAAAA GGTATCCC TTTTACACCACTAGT TERM 3158 2841601 - 2841581 - T 93 -11.2 -4.15565 | opp_overlap 2841581 CTGATTATTGTAAAA GGGATACC GAAAA GGTATCCC TTTTACACCACTAGT TERM 3159 2842348 - 2842375 + T 100 -11.4 -4.93877 | ACTTGGTAACTCATT GAGCTGACAGTA GATT TACTGTTGGCTC TTTTATTTACTGAAG TERM 3160 2842766 - 2842780 + T 71 -2.1 -5.15381 | overlap 2842767 CGTTGTGCTGTTTCA TCATC GGCCA GATGG TTTTTTAACTCTCTT TERM 3161 2843427 - 2843403 - T 100 -10 -5.26119 | opp_overlap 2843426 CCTCCAAAAAGAAAA CCCTGTCAGC TTACC GCTCACAGGG TGGGGGTGACCATCT tnpB 2844709 - 2843960 - | transposase B TERM 3162 2844064 - 2844044 - G 71 -4.7 -4.50976 | TTTCAGATTATAAAA GCTGTCGAT ATA ATCGATAAC ATCAGCGATACCCTG TERM 3163 2844263 - 2844283 + g 83 -8.9 -4.41348 | opp_overlap 2844262 2844265, overlap 2844265 ATCGCTATGGAACAC CACTGACCC TGT GGGTCGGCG TTTATTTACGGCCAG TERM 3164 2844308 - 2844331 + g 85 -10.3 -4.03234 | GGCCAGCCTTAAGGC CCGGACAGT CAAGTC GCTGTCCGG TTTGTCTGAGAAGGC TERM 3165 2844746 - 2844734 - R 86 -9.1 -4.3898 | overlap 2844736 ACTACGGGCATAAAA CACGC TGC GCGTG AGCGACAAGCAGCGG TERM 3166 2844760 - 2844736 - R 72 -7.8 -3.80133 | overlap 2844734 TACGGGCATAAAACA CGCTGCGCGT GAGCG ACAAGCAGCG GCATACCTGTTGGAT tnpA 2845131 - 2844799 - | IS1329 transposase A YE2628 2845485 - 2846861 + | hypothetical protein trp1400B 2847713 - 2846919 - | IS1400 transposase B trp1400A 2848051 - 2847764 - | IS1400 transposase A TERM 3167 2847852 - 2847864 + g 85 -2.7 -5.58454 | CGTCGGTTCTCATCT TCAAG GTC TTTGA TTTTTTTAATATCAG TERM 3168 2848306 - 2848323 + r 70 -7.1 -3.85698 | opp_overlap 2848309 2848321, overlap 2848309 TTGCATATTCAGCTA TAATTGC AAAA GCAATTA TTTCTCGCAAGAGAA TERM 3169 2848398 - 2848351 - R 90 -11 -3.90874 | gap 1, opp_overlap 2848363 2848365 2848367, overlap 2848358 GAAAAAACAGTTAAA TTTTA-AACATGAGACATCTAAT AAT ATTAGATGTCTCATGTCACCAAA AATCAACGGTATCTG TERM 3170 2848390 - 2848358 - R 100 -19.5 -3.72363 | opp_overlap 2848363 2848365 2848367, overlap 2848351 CAGTTAAATTTTAAA CATGAGACATCTAAT AAT ATTAGATGTCTCATG TCACCAAAAATCAAC TERM 3171 2848363 - 2848385 + r 83 -12.2 -2.62184 | opp_overlap 2848358 2848351, overlap 2848365 2848367 AAATTTTAAACATGA GACATCTAAT AAT ATTAGATGTC TCATGTCACCAAAAA TERM 3172 2848545 - 2848530 - R 70 -7.6 -3.65812 | GCTCGCTTAATATAA GATGAG CAAA CTCATC AGGAGAAAAAATGCT YE2632 2850496 - 2848733 - | hypothetical protein TERM 3173 2848800 - 2848813 + g 74 -3.9 -4.91046 | AAATTAGAAATTCTC TTTTC TTCT GAAAA TTTATTTATTTTCTC TERM 3174 2849042 - 2849066 + g 71 -4.3 -4.67048 | opp_overlap 2849041 2849038, overlap 2849041 GATCGCGAGAATTAT CTTAGGAAGAT TAT AACTTACTAAG TTTCTTTTGAAATCA TERM 3175 2850466 - 2850476 + g 77 -4 -5.08601 | TGAATCTTGATTTAT GTTT ATG AAAC TTTTTCTTAAGCTCA YE2633 2850952 - 2850641 - | hypothetical protein YE2634 2852388 - 2850949 - | hypothetical protein YE2635 2853514 - 2852375 - | putative metallo-beta-lactamase superfamily protein TERM 3176 2854138 - 2854159 + H 100 -14.5 -5.40004 | opp_overlap 2854138 GCCAAATTAGAGAAA CCCGCTTAG GCAA CTAAGCGGG TTTTTTGCTTTACTC TERM 3177 2854159 - 2854138 - H 100 -14.5 -4.17516 | opp_overlap 2854138 GCCAAATTAGAGAAA CCCGCTTAG GCAA CTAAGCGGG TTTTTTGCTTTACTC TERM 3178 2854326 - 2854310 - g 73 -9.5 -3.40403 | opp_overlap 2854323 GCTGTGCCATGACAA GATAGAG ACG CTCTATC AGGACGATCACCTGG rluA 2854263 - 2854961 + | putative ribosomal large subunit pseudouridine synthase YE2637 2855511 - 2854972 - | hypothetical protein TERM 3179 2855358 - 2855370 + g 95 -3.3 -5.92399 | TTAGCTGTTTATCAC GCTCA AGT TGTGC TTTTTTATTTTCTTC TERM 3180 2855401 - 2855422 + g 71 -4.4 -4.75308 | overlap 2855402 CACAGCTTCTCTCGC CTCACGAG CCTGAA CTCGTGAC TTTTTAGCTGTTCGT TERM 3181 2855574 - 2855599 + r 100 -11.9 -4.26589 | TTTGAGAGTTTCACA GCCCGCTTAAG GAAA CTTAAACGGGC TTTTGGCTATCTGAT YE2638 2856086 - 2855655 - | phosphoenolpyruvate-dependent sugar phosphotransferase system, IIA component YE2639 2857536 - 2856139 - | putative transporter protein TERM 3182 2856800 - 2856811 + g 76 -2.2 -5.26119 | GCCCAATCTTTCTTT GCAT ATAA GTGC TTTTCTTTTTCAACA TERM 3183 2857473 - 2857459 - G 70 -7.8 -3.88182 | GTAACCAAAAAGCAA GCCACC AAA GGTAGC GACTAATGTTATTTG TERM 3184 2857957 - 2857934 - R 84 -2.5 -5.66229 | overlap 2857936 AGCAATAATAAAAAA TATCCATTT GATATT AAATGGAAA AAATGAAAAATAGAT TERM 3185 2857955 - 2857936 - R 70 -5.1 -4.45127 | overlap 2857934 CAATAATAAAAAATA TCCATTT GATATT AAATGGA AAAAATGAAAAATAG TERM 3186 2858044 - 2858058 + r 81 -4.4 -5.26316 | ACCTTGTTAACTATT TTATTT CAA AAATAA TTTTTTATGGAATAA YE2642 2860016 - 2859267 - | putative phosphopantetheinyl transferase TERM 3187 2859830 - 2859845 + g 100 -9 -4.85599 | CCAGATATTCAGCAC GCCGTT TTGC AACGGC TTTTTGTAAACTGCC YE2643 2860225 - 2860025 - | hypothetical protein YE2644 2860721 - 2861560 + | putative C4-dicarboxylate transporter,periplasmic protein TERM 3188 2861696 - 2861714 + G 71 -4.6 -4.54449 | overlap 2861698 GCTATGGCTCGCTAT TATCTATC AAC GATGGATG TTTTATATCGCCTGT YE2645 2861684 - 2862190 + | putative C4-dicarboxylate transporter, small subunit TERM 3189 2862542 - 2862552 + G 71 -8.2 -3.69256 | TCAGGGTCATCAGTA GCCG ACA CGGC TTCTATTGGCTCAGT YE2646 2862209 - 2863501 + | putative C4-dicarboxylate transporter, large subunit TERM 3190 2863514 - 2863570 + T 73 -3.9 -5.06451 | opp_overlap 2863531, overlap 2863515 2863528 TAACAAATCAGCTCA TCATCTGGCATA-AATAAGTCGGGCCG CTGAC TGGCCCGACGCATTATAT-CAAGATGG TTTTTTGAAATAATC TERM 3191 2863553 - 2863531 - T 100 -12 -4.06687 | opp_overlap 2863528 2863515 2863514 ATCTGGCATAAATAA GTCGGGCC GCTGACT GGCCCGAC GCATTATATCAAGAT citT 2865164 - 2863701 - | citrate carrier TERM 3192 2864132 - 2864174 + g 83 -11.7 -3.53012 | opp_overlap 2864142 2864146, overlap 2864135 2864144 CCACCAAGGTCGCCA GAT-TCACCAACGTATTCCAG GCG CTGGAATAT-TTGGTGATATC TTTCCACGACACCAC TERM 3193 2864135 - 2864170 + g 88 -13.6 -3.24232 | gap 1, opp_overlap 2864142 2864146, overlap 2864132 2864144 CCAAGGTCGCCAGAT TCACCAACGTATTCCAG GCG CTGGAATAT-TTGGTGA TATCTTTCCACGACA TERM 3194 2864144 - 2864162 + g 82 -10.4 -3.85082 | opp_overlap 2864142 2864146, overlap 2864135 2864132 CCAGATTCACCAACG TATTCCAG GCG CTGGAATA TTTGGTGATATCTTT TERM 3195 2865003 - 2864973 - G 74 -11.2 -2.80975 | overlap 2864972 ACTTAGCACGCAAAT TGTCACCGCGATAA AAC TTATCGCCGTGGCA GGAATTGGCTCTAAA citG 2866126 - 2865158 - | 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase TERM 3196 2865638 - 2865626 - G 74 -6.9 -4.45083 | opp_overlap 2865630 2865632 GCCATATTGATAAAA CAGGC GCT GCCCG GCGGTTTGTTGTGGG TERM 3197 2866117 - 2866089 - G 83 -11.7 -3.53343 | overlap 2866110 AACTTTTTGCTGAAA TCATCGCTTGCCC AAA AGGCAGGCGACGA AACCGCCATCTCGTC citX 2866679 - 2866131 - | putative apo-citrate lyase phosphoribosyl-dephospho-CoA transferase citF 2868200 - 2866683 - | citrate lyase alpha chain citE 2869100 - 2868204 - | putative citrate lyase beta chain citD 2869390 - 2869097 - | citrate lyase subunit gamma TERM 3198 2869338 - 2869322 - G 72 -10.1 -3.05384 | TTCGGGTGGATTTAA TGGCGCG ATA CGCACCA TAACGTCGCTCGATT citC 2870567 - 2869491 - | [citrate [pro-3s]-lyase] ligase TERM 3199 2870176 - 2870199 + g 73 -7.5 -4.18018 | gap 1 CTCAATTGTTTGGCA TAGCG-CTGC AAACG GCAGTCGCTA TTTTCCATCAACACC TERM 3200 2870625 - 2870612 - H 75 -5.3 -4.9072 | ACAAATAAAAAACAA GTTGA GTCA TCAAC AACAAAATAAATAAT TERM 3201 2871625 - 2871607 - g 73 -5.2 -4.50159 | opp_overlap 2871616 2871618 2871619, overlap 2871609 TGGAACCCAAAGAAA TAGCGCGA GTG TTGCGCCA ACAAGAAGCATTGTT citA 2870925 - 2872580 + | sensor kinase protein citB 2872602 - 2873288 + | response regulator protein TERM 3202 2873318 - 2873351 + F 70 -5.3 -4.56597 | gap 1, overlap 2873319 2873321 CGCTCACACCACACT TTC-GCGCTCCACA CCTATCC TGTGGAGCGCTGCG TTTTTCACCGGAAAC TERM 3203 2873321 - 2873347 + F 95 -13.8 -2.83903 | overlap 2873319 2873318 TCACACCACACTTTC GCGCTCCACA CCTATCC TGTGGAGCGC TGCGTTTTTCACCGG YE2656 2873490 - 2874119 + | GerR-family transcriptional regulatory protein YE2657 2874121 - 2875698 + | sensor kinase protein TERM 3204 2875900 - 2875911 + G 70 -2.2 -4.96848 | gap 1, overlap 2875900 GGCCGCAATGGTGAT G-GGC TAT GCCGC TTTTTATCTGACACG TERM 3205 2876489 - 2876508 + G 70 -7.8 -3.91506 | opp_overlap 2876472 2876487 CAAGAGCAGCAAAGC CCCCCCAT GCCG ATGGGGCG TATTTTTCGCGATGC TERM 3206 2876737 - 2876753 + G 70 -2.2 -4.90079 | TTTGCTATTTCGCGG TCAGCG CGCAC CGATGA TTTTGTTATTCGCAT TERM 3207 2876829 - 2876839 + G 75 -5.4 -4.75308 | ATAACTATCCGCTAC TGTC CGT GACA TTTTTCAGTATTGGT YE2658 2875787 - 2877118 + | putative transporter protein TERM 3208 2877306 - 2877325 + G 83 -10 -4.20367 | overlap 2877299 CGTTACCACCGTCGT CCAAGCGG AAGG CCGTTTGG TTATTTATTGCAGCG TERM 3209 2877381 - 2877367 - g 73 -8.6 -3.94877 | ATGTGTGAAGAAGAA GCCAAA GCA TTTGGC GAAAAATACGATGTC YE2659 2877238 - 2878269 + | extracellular solute-binding protein TERM 3210 2878366 - 2878326 - f 100 -13.5 -3.80625 | overlap 2878359 TTTCTATAACCGAAA CCTTGACGTTGCAACAA GCTAACA CTGCTACAACGTCAAGG GCGAAGGTTAGATCT TERM 3211 2879719 - 2879733 + G 77 -6.4 -4.53705 | opp_overlap 2879718 TTGCCTTTAACGTAT TGCTGT ACG GCAGCA TTTTCTATGGCAGTT YE2660 2878392 - 2880470 + | putative binding protein-dependent transport system, inner-membrane component fbpC 2880496 - 2881587 + | ferric transporter ATP-binding subunit TERM 3212 2881594 - 2881626 + F 100 -12 -4.61231 | opp_overlap 2881588 CCGCAGTAAGCGCCC TGGCGGGCAGAG AACCGACAC CGCTGCCCGCCA TTTTTCCGGCTATCA TERM 3213 2881870 - 2881893 + F 100 -14.6 -5.19819 | opp_overlap 2881870 AGCCATATTAGAGAA GCCCGCTTAG GCAA CTAGGCGGGC TTTTTGCTTTTGTTT TERM 3214 2881893 - 2881870 - f 100 -12.4 -3.57918 | opp_overlap 2881870 AGCCATATTAGAGAA GCCCGCTTAG GCAA CTAGGCGGGC TTTTTGCTTTTGTTT YE2662 2882443 - 2883075 + | putative two-component response regulator TERM 3215 2883357 - 2883393 + GF 73 -8.7 -3.49653 | opp_overlap 2883369, overlap 2883358 CCCCGTTTGTTGTTA ACCGCGATGATACTTCC ATC GAAGGTATTGTCGCGGA TTATCTAAAAATCAT TERM 3216 2883358 - 2883392 + GF 83 -12.2 -2.69471 | opp_overlap 2883369, overlap 2883357 CCCGTTTGTTGTTAA CCGCGATGATACTTCC ATC GAAGGTATTGTCGCGG ATTATCTAAAAATCA TERM 3217 2883905 - 2883871 - gf 79 -2.2 -5.40072 | opp_overlap 2883877 2883878, overlap 2883872 2883878 GGCGCTGGAAAAAAA TCAAAAACTGATTGAT TAC ATTAATCAGATTCTGG AATTACTGCCCAGCC TERM 3218 2883898 - 2883878 - gf 85 -5.5 -5.31158 | opp_overlap 2883878 2883877, overlap 2883872 2883871 GAAAAAAATCAAAAA CTGATTGAT TAC ATTAATCAG ATTCTGGAATTACTG TERM 3219 2886520 - 2886507 - gf 91 -8.1 -4.82333 | AGAATAAGCTAAAAA GCCTC TCGG GAGGC AATACAGATGTGGAG YE2663 2883050 - 2886874 + | putative virulence sensor protein TERM 3220 2886906 - 2886926 + F 100 -7.6 -5.626 | opp_overlap 2886906 ATGTTTTCATTGAAA CTCGTCAG CCGTT TTGACGAG TTTTTTTATGAGCTA YE2664 2887252 - 2887782 + | fimbrial protein TERM 3221 2888256 - 2888244 - g 80 -2.6 -5.40072 | overlap 2888253 CCCGCCTTAAAAAAA GCCG ATACA CAGC CTGAAAACAAACTGG YE2665 2887875 - 2888609 + | pili assembly chaperone YE2666 2888658 - 2891282 + | fimbrial usher protein YE2667 2891387 - 2892631 + | hypothetical protein YE2668 2892628 - 2893368 + | pili assembly chaperone TERM 3222 2893466 - 2893424 - T 75 -8.7 -3.68757 | gap 1 CGGAAAAGCAGACAA GTTTGCTGA-AAAACAAGCC AATA AGCTCATTCTCTCAGCAAAC GCGCATTTTTAGTGT TERM 3223 2893612 - 2893659 + T 100 -9.2 -5.53991 | opp_overlap 2893624, overlap 2893617 2893624 TCCAGTCAGAGGAGC CAAATTAGAGAAGCCCGCTTAG GAAA CTAGGCGGGCTTTTTGCTTTTG TTTTTTTGATAAATG TERM 3224 2893617 - 2893654 + T 100 -7.7 -5.57888 | opp_overlap 2893624, overlap 2893612 2893624 TCAGAGGAGCCAAAT TAGAGAAGCCCGCTTAG GAAA CTAGGCGGGCTTTTTGC TTTTGTTTTTTTGAT TERM 3225 2893647 - 2893624 - T 100 -12.4 -3.65112 | opp_overlap 2893617 2893612 2893624 AGCCAAATTAGAGAA GCCCGCTTAG GAAA CTAGGCGGGC TTTTTGCTTTTGTTT TERM 3226 2893624 - 2893647 + T 100 -14.6 -5.19819 | opp_overlap 2893624, overlap 2893617 2893612 AGCCAAATTAGAGAA GCCCGCTTAG GAAA CTAGGCGGGC TTTTTGCTTTTGTTT YE2669 2894614 - 2893724 - | 2-dehydropantoate 2-reductase TERM 3227 2894839 - 2894820 - H 76 -7.8 -4.09108 | opp_overlap 2894819, overlap 2894821 GGTAAGTCACACAAA GGCTCAGG GGAA CCTGAGCG GGCTTTTTACTTCTG TERM 3228 2894838 - 2894821 - H 83 -11.3 -3.04983 | opp_overlap 2894819, overlap 2894820 GTAAGTCACACAAAG GCTCAGG GGAA CCTGAGC GGGCTTTTTACTTCT TERM 3229 2896127 - 2896139 + G 75 -7.7 -4.17048 | opp_overlap 2896127 2896126 2896118 CAACAAGCAATAAAT CTTGC AGC GCAAG TTCTTTTGCAACAAG YE2670 2895497 - 2896978 + | GntR family regulatory protein YE2671 2897555 - 2897247 - | hypothetical protein YE2672 2897703 - 2898287 + | TetR family transcription regulatory protein YE2673 2899341 - 2898367 - | putative chemotaxis protein YE2674 2899520 - 2900692 + | hypothetical protein YE2675 2901524 - 2900763 - | DeoR family regulatory protein TERM 3230 2900816 - 2900826 + g 73 -3.2 -4.87665 | overlap 2900824 CAATTGCTTGCTTAT GAGG ATT CTTC TTTTTATCGGTGACG YE2676 2902438 - 2901629 - | putative haloacid dehalogenase-like hydrolase TERM 3231 2902274 - 2902248 - G 73 -2.4 -5.04868 | overlap 2902251 2902252 TTAAACGAAATAAAA TAACGAATTAAA TAT TCTAATTCAGTA TTGCGGATAACGGCT TERM 3232 2902479 - 2902458 - R 100 -8.8 -5.12068 | TAGATCCAATAAAAA GGGAGAAA ATATTA TTTCTCCC TCTGGCTGCTGATAA YE2677 2903457 - 2902618 - | hypothetical protein YE2678 2905104 - 2903500 - | putative phosphotransferase system component TERM 3233 2904699 - 2904713 + g 77 -2.8 -5.23292 | overlap 2904701 TTGAGGTGCCGCCAG TGCCTA CAA TAGGAA TTTTCTTTTCTATCG TERM 3234 2905472 - 2905453 - R 76 -10 -3.26545 | overlap 2905455 TGCAGACATCATCAA TAGCGGCT AATA AGCCGCCA TGACTGCAATCATAA TERM 3235 2905470 - 2905455 - R 77 -10.4 -3.19563 | overlap 2905453 CAGACATCATCAATA GCGGCT AATA AGCCGC CATGACTGCAATCAT YE2679 2906885 - 2905488 - | hypothetical protein argG 2907123 - 2908487 + | argininosuccinate synthase YE2681 2909098 - 2908619 - | hypothetical protein YE2682 2909925 - 2909098 - | hypothetical protein YE2683 2910793 - 2909951 - | hypothetical protein TERM 3236 2910211 - 2910235 + g 71 -4.9 -4.60808 | overlap 2910212 CCAAAAAACCATCAT TGGCAGATAAC TTT GTCACCTGCCG TTTATCTTTTTCTGA TERM 3237 2910682 - 2910697 + g 100 -10.4 -4.68593 | opp_overlap 2910682 2910681 TATCCCCCATAGAAT GGGGAG TAAA CTCCCC TTTTTCCATGCTGAA TERM 3238 2910910 - 2910897 - R 71 -2.3 -5.14163 | ACTTATTAATAAAAA CGGTT CCGG AGCCG GTGACTACACTGGTC YE2684 2913885 - 2911171 - | hypothetical protein TERM 3239 2912697 - 2912735 + g 85 -8.1 -4.82855 | gap 1 TCCATACCTCTTCGC CCGGTGGGCC-CACAACG ATAG CATTCTGTGGCCCGCTGG TTTTTGGCTTTGGTG YE2685 2917867 - 2914034 - | hypothetical protein YE2686 2919252 - 2917876 - | putative OmpA family protein YE2687 2920598 - 2919249 - | hypothetical protein YE2688 2921153 - 2920602 - | hypothetical protein TERM 3240 2920778 - 2920816 + g 74 -3.1 -5.04175 | opp_overlap 2920775, overlap 2920781 2920784 2920787 AAGCAGCAACAACGC CGATGGCAGTGACGCCA CTGTT TAGCGTCAGTTCTATTG TTTTTGTCTCATTAG TERM 3241 2921331 - 2921310 - R 100 -10.9 -4.42386 | opp_overlap 2921310 CCGTCACTGAGAAAA CTTGCCACC CGAA AGTGGCAAG TTTGATGTCTGGTCT TERM 3242 2921310 - 2921331 + r 86 -10.2 -3.90358 | opp_overlap 2921310 CCGTCACTGAGAAAA CTTGCCAC CCGAAA GTGGCAAG TTTGATGTCTGGTCT YE2689 2921845 - 2921360 - | hypothetical protein YE2690 2923604 - 2922177 - | hypothetical protein TERM 3243 2923627 - 2923646 + r 95 -7.8 -5.12785 | overlap 2923628 TTAAAGTCGCTATAT TCAGTCGC AGCA GCGGCTGG TTTATTTTTTGCTTC TERM 3244 2923628 - 2923645 + r 75 -9.1 -3.65231 | overlap 2923627 TAAAGTCGCTATATT CAGTCGC AGCA GCGGCTG GTTTATTTTTTGCTT YE2691 2924221 - 2923697 - | hypothetical protein YE2692 2924928 - 2924326 - | fimbrial protein TERM 3245 2924645 - 2924659 + g 80 -7.2 -4.60255 | GGACATTTATTCAGC GCAATT TGA AATTGC TTTTTACCCGCTTCT YE2693 2927588 - 2924913 - | outer membrane usher protein TERM 3246 2925487 - 2925475 - G 76 -9.1 -3.95584 | TGGTGAGCAACTAAA CTGCC GTT GGCAG AGGCAGACAACTGGC YE2694 2928489 - 2927692 - | putative pili chaperone protein TERM 3247 2928582 - 2928596 + r 71 -8.6 -3.44146 | opp_overlap 2928579 2928578 2928582 TGGGTCGCAAACCTA TCACTC AAC GAGTGA TTAATTATAAGACAG YE2695 2929157 - 2928597 - | frimbrial protein clpB5 2931996 - 2929324 - | Clp ATPase TERM 3248 2930792 - 2930774 - G 79 -11 -3.51924 | CGCGCAGGGATATAA CGATGCGA TAA TCGCACCG CAGCTTGCAAGGCTT TERM 3249 2931418 - 2931440 + g 83 -9.8 -4.20696 | overlap 2931435 AGTCAGATCCGTGGT GTACTGCGCC AAT GTCGCGGTAC TTTTGCCGTTAATAG YE2697 2932716 - 2934596 + | hypothetical protein TERM 3250 2935046 - 2935056 + G 78 -5.4 -4.96848 | GACAGGCAACATGAT GAGA AAT TCTC TTTTTATATCGGCAG YE2698 2934596 - 2935621 + | hypothetical protein YE2699 2935696 - 2936859 + | hypothetical protein TERM 3251 2937337 - 2937317 - g 77 -6.9 -4.614 | overlap 2937318 TTGAATTATATAAAA CCAAAGAGA CAC TCTCCTTGA GCAATACTGCGGGTC YE2700 2936866 - 2937870 + | putative fimbrial protein TERM 3252 2938295 - 2938269 - g 72 -10.2 -3.07816 | opp_overlap 2938269 2938271, overlap 2938248 2938247 2938271 TGCCGATTTATTCAA CACTGGGACCAT GAA ATGGTCACAATG TTAAATAGCCTGCGA TERM 3253 2938390 - 2938401 + G 74 -4.4 -4.86773 | ACAGAAAAGATTATG TCAG TCGG CTGA TTTTTAATACTTTTA YE2701 2937909 - 2939246 + | hypothetical protein YE2702 2939243 - 2939890 + | hypothetical protein YE2703 2939891 - 2941561 + | hypothetical protein YE2704 2941568 - 2942053 + | hypothetical protein TERM 3254 2942104 - 2942067 - T 100 -15.1 -4.70266 | opp_overlap 2942067, overlap 2942068 AATATCAGCCAAAAA CCACTTCACGCGATATT ATCC AATATAGCGTGAAGTGA TAATTGCACCAAGAT TERM 3255 2942067 - 2942104 + T 91 -12.9 -2.71011 | opp_overlap 2942067 2942068 AATATCAGCCAAAAA CCACTTCACGCGATATT ATCC AATATAGCGTGAAGTGA TAATTGCACCAAGAT TERM 3256 2942103 - 2942068 - T 100 -16.4 -3.41075 | opp_overlap 2942067, overlap 2942067 ATATCAGCCAAAAAC CACTTCACGCGATATT ATCC AATATAGCGTGAAGTG ATAATTGCACCAAGA YE2705 2942789 - 2942187 - | LuxR family regulatory protein TERM 3257 2942652 - 2942663 + g 88 -2.2 -5.86061 | AAATATCACATTAGC TCGG TGTA TCGA TTTTTTTTCATGCGG TERM 3258 2942881 - 2942857 - R 73 -7.2 -4.20025 | opp_overlap 2942856, overlap 2942860 AATTTTGAATAGAAA TGATGATGAC AAATA GTCATCAGCA GAATTTTATCTTTTC TERM 3259 2943257 - 2943271 + r 73 -2.8 -5.1167 | overlap 2943251 ACAGTTATTGGCTCA GACG CTTTGGC CGTC TTTTTATATTCCCTT TERM 3260 2943463 - 2943445 - R 78 -5.3 -5.00611 | opp_overlap 2943445 CAGAAATAAAATAAA CCCATAC GATTT ATATGGG TGCTATGCCGCTAGC TERM 3261 2943558 - 2943538 - R 100 -6.9 -5.72622 | opp_overlap 2943538 2943546, overlap 2943540 CTTAGAAATAAAAAA TCGATCGGT GAT ACCAATCAA ATTTATTTATACCAT TERM 3262 2944336 - 2944301 - R 72 -7.6 -3.9009 | AAGTTATTGTATAAA TACCGAACCCGATCAC CTGG GTAACCTGATCCGGTA TCAACTGGAAATTTA cobT 2945407 - 2944349 - | nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase TERM 3263 2944512 - 2944528 + g 73 -3.6 -4.93296 | opp_overlap 2944507, overlap 2944513 AACTGCAAATGGTTC AGTGCG ATAAC CGCACC TTTTTCTGCTGATAG cobC 2946062 - 2945430 - | alpha-ribazole-5'-phosphate phosphatase cobS 2946846 - 2946100 - | cobalamin synthase TERM 3264 2946627 - 2946611 - G 74 -6.5 -4.34402 | overlap 2946625 CCGTCGAGATGAAAA GCACCGG TAA CCAATGC CAACGCCAGGACATA cobU 2947388 - 2946843 - | adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase TERM 3265 2947167 - 2947157 - G 71 -8.2 -3.67611 | opp_overlap 2947163 TGCATTCCAACATAA CGGC TTC GCCG GGTTCGACGTGCTTT cbiP 2948923 - 2947385 - | cobyric acid synthase TERM 3266 2948950 - 2948979 + r 83 -9.3 -4.02005 | overlap 2948971 TCATCGCGCCTCCTC CGTTTCGCGTTGA CGCA TCAGCGCGAAGAG TTGTTCTTCCGTTTT cbiO 2949750 - 2948935 - | putative cobalt transport ATP-binding protein cbiQ 2950439 - 2949762 - | putative cobalt transport protein TERM 3267 2950082 - 2950063 - G 75 -3.4 -5.05505 | opp_overlap 2950076, overlap 2950064 AGCACAAACCAAAAA GTGGCTGC CAAT GCCGCCAA ACTGCGCCATAGCGT cbiM 2951440 - 2950709 - | cobalt transport protein CbiM TERM 3268 2951409 - 2951386 - G 76 -11 -3.17075 | overlap 2951392 TCGGTGCCAACGTAA GCAGAATGGC CATC GCCACTCCGC TATACGAGAGTTTCT cbiL 2952330 - 2951617 - | cobalt-precorrin-2 C(20)-methyltransferase cbiK 2953124 - 2952330 - | cobalt chelatase TERM 3269 2952394 - 2952364 - G 81 -12.7 -2.52464 | TTTTGCTGCAAGGCA CTCGCCAGATGCT GAACA AACATCTGGCGAA TCAATGGGTTCTCTC cbiJ 2953948 - 2953121 - | cobalt-precorrin-6x reductase cbiH 2954670 - 2953945 - | precorrin-3 C17-methyltransferase TERM 3270 2954226 - 2954213 - G 73 -3.7 -4.86822 | overlap 2954214 AAGCAGATAACAAAA TCGGC TTGT GCCGC CGCGATAATGCGTTT cbiG 2955725 - 2954670 - | cobalamin biosynthesis protein CbiG cbiF 2956497 - 2955706 - | precorrin-4 C11-methyltransferase cbiT 2957059 - 2956490 - | cobalt-precorrin-6Y C(15)-methyltransferase cbiE 2957651 - 2957049 - | cobalt-precorrin-6Y C(5)-methyltransferase cbiD 2958814 - 2957648 - | cobalt-precorrin-6A synthase TERM 3271 2958540 - 2958573 + g 75 -11.7 -2.50994 | opp_overlap 2958540 2958541 2958543, overlap 2958539 2958543 TGGGTAGCATCAATA TCATCGCCGCCATCT TTGC GGATTGCGGCGGTGG CTTGCTGACCTTCAA cbiC 2959458 - 2958811 - | precorrin-8X methylmutase TERM 3272 2958998 - 2958967 - G 73 -7.2 -4.24342 | gap 1 CGCCGCACCAACAAA CCCCACCGGCACGCC GAT GAC-TGCCACCGGGG ACACTTGCCGTTCTA TERM 3273 2959037 - 2959027 - G 73 -8.2 -3.81626 | overlap 2959019 TAACAAACGGAATAA CGCC GTC GGCG CATTACCGAATACAA cobD 2960428 - 2959472 - | cobalamin biosynthesis protein TERM 3274 2960237 - 2960216 - G 74 -4.3 -4.88736 | overlap 2960218 CATCAGCCATAAAAA CCCCCAGCT GACG AGCCAGGTG ATACCCACCACCAGT cbiA 2961828 - 2960425 - | cobyrinic acid a,c-diamide synthase TERM 3275 2961854 - 2961835 - R 91 -7.1 -5.26316 | GCATTGCATAAAAAA TCCCGCC ATTTCA AGCGGGA TATGCAGTGTCAAAA pocR 2963386 - 2962484 - | pdu and cob operons regulatory protein TERM 3276 2963667 - 2963631 - R 70 -7.3 -3.8448 | opp_overlap 2963660, overlap 2963658 2963660 GAATAGATCACGAAA TTTCCTCAACTCGTTTC ATA GATTCAAGATGAGGAAA CTCATTTGATTTATA pduF 2964493 - 2963678 - | propanediol diffusion facilitator pduA 2965247 - 2965543 + | putative propanediol utilization protein TERM 3277 2965577 - 2965550 - g 76 -7 -4.45151 | AATAGCTAATGAAAA GCAATGACCTGG TCGA CCAAATCATGGC GCAGGTGATAGCAAA pduB 2965543 - 2966370 + | putative propanediol utilization protein TERM 3278 2967321 - 2967354 + G 80 -8.9 -4.16016 | gap 1 CCATCGGCGGTGCCA TCAGGCATTCGCGCCA TTT TGGC-CGAAAACCTGA TTTGTTCGGCGCTGG TERM 3279 2967830 - 2967816 - g 74 -10 -3.57561 | opp_overlap 2967814 2967821 CTGGAAGTGGTGAAA GCCTTG GCG CAAGGC GGCTTTGAAGATGTG pddA 2966391 - 2968055 + | putative propanediol utilization protein: dehydratase, large subunit pddB 2968068 - 2968739 + | putative propanediol utilization protein: dehydratase, medium subunit TERM 3280 2968915 - 2968901 - g 73 -7.1 -4.16016 | CCATTGGCGAATAAA CACCC TGACT GGGTG AAAACCGCCACCAAT TERM 3281 2969212 - 2969237 + G 73 -5.3 -4.60797 | opp_overlap 2969201, overlap 2969213 CAAAGCGACCATTTG TGCCGCCTTCG TGCG CGAAGCCGCCG TTTTGTATGTCCAGC pddC 2968754 - 2969278 + | putative propanediol utilization protein: dehydratase, small subunit TERM 3282 2969367 - 2969392 + F 80 -8.9 -3.9749 | gap 1, overlap 2969366 CTTCCTTGGGGGCTC GAG-CCGCGCCG TCC TGGCGCGGACGC TTTACTCTTCTGCCT TERM 3283 2970307 - 2970295 - g 75 -3.3 -5.09521 | TGAAGAAACCAAAAA CATCG TTC CGGTG GCGCGGGCTTTAATT ddrA 2969606 - 2971432 + | putative propanediol utilization protein: diol dehydratase reactivation ddrB 2971429 - 2971770 + | putative propanediol utilization protein: diol dehydratase reactivation pduA 2971802 - 2972077 + | putative propanediol utilization protein TERM 3284 2972224 - 2972208 - g 83 -4.3 -5.47159 | opp_overlap 2972208 2972217 TTGGAATAGAAAAAA CCAACGG CTC CGGCTGG ATGTTAATTCGTCTG pduK 2972099 - 2972701 + | putative propanediol utilization protein: polyhedral bodies TERM 3285 2973280 - 2973305 + G 95 -12.5 -4.11751 | ACCGACGAGGCCAAT GCCGCTGGAGC CGAT GATCCGGCGGC TTTTGCGACGTTGCT pduL 2972701 - 2973348 + | putative propanediol utilization protein pduM 2973345 - 2973842 + | putative propanediol utilization protein pduN 2973846 - 2974121 + | putative propanediol utilization protein: polyhedral bodies pduO 2974137 - 2975153 + | putative propanediol utilization protein: B12 related TERM 3286 2976358 - 2976380 + G 73 -3.4 -4.83615 | GCGCTTGAATCTGGC TGCACGTTTG TTG CAAACCTCCA TTTTTGTCAAAAATG pduP 2975153 - 2976541 + | putative propanediol utilization protein: CoA-dependent propionaldehyde dehydrogenase pduQ 2976552 - 2977667 + | putative propanediol utilization protein: propanol dehydrogenase pduS 2977690 - 2979051 + | putative NADH dehydrogenase TERM 3287 2979043 - 2979056 + F 82 -5.9 -5.00616 | GCCATCACTATAAGT CGCGG CTGA CCGTG TTTTTTAAAGAGGAG TERM 3288 2979365 - 2979355 - g 76 -8.2 -4.0896 | opp_overlap 2979354 2979358, overlap 2979344 2979343 2979356 AAATCTGGTGGAAAA CCGC CAG GCGG CTGGTGTGGTGGAGA pduT 2979077 - 2979634 + | putative propanediol utilization protein: polyhedral bodies pduU 2979634 - 2979984 + | putative propanediol utilization protein pduV 2979989 - 2980423 + | hypothetical protein pduW 2980451 - 2981689 + | propionate kinase TERM 3289 2982338 - 2982316 - g 70 -9.8 -3.23692 | opp_overlap 2982316 CACCAGCAGCAGCAA GTGGCCAGTG GCA CTCTGACCAC TTTAGCGGATCAAGT cobA 2981698 - 2982465 + | putative uroporphyrin-III C-methyltransferase cobD 2982513 - 2983586 + | threonine-phosphate decarboxylase pduX 2983579 - 2984439 + | putative GHMP kinase YE2751 2984805 - 2985788 + | putative periplasmic binding protein YE2752 2986055 - 2987470 + | ABC transporter ATP binding protein TERM 3290 2987799 - 2987813 + G 73 -7.8 -3.97139 | overlap 2987781 GTGGCTTTCGCGCTA GCCGGT GGT ATCGGC TTATTATTGGGGTTA YE2753 2987463 - 2988485 + | putative branched-chain amino acid transport system, permease component YE2754 2988488 - 2989471 + | putative ABC transporter, permease protein TERM 3291 2989514 - 2989494 - T 87 -6.1 -5.10933 | opp_overlap 2989494 TTAGCCAAAAGAAAA GGCTGGC GATTCAT ACCAGCC TTTCTATTAATAGCG YE2755 2989878 - 2989561 - | hypothetical protein YE2756 2991100 - 2990042 - | hypothetical protein TERM 3292 2990477 - 2990488 + g 75 -5.8 -4.55798 | CATTTTAACCGACTG GCTG AGTG CAGC TTTTAATTTAGGCTC YE2757 2992505 - 2991396 - | hypothetical protein TERM 3293 2993969 - 2993979 + G 75 -3.2 -5.1101 | GATGTGGATGCTCAA CTGT ATA ACGG TTTTTTCAGTGATGC TERM 3294 2994155 - 2994173 + G 73 -10.2 -3.14132 | opp_overlap 2994145 CAACAGCGCTGGTTA GCGCATCG TCG CGAAGCGC TTAATCCAGAAAAAG sbcB 2992871 - 2994301 + | exonuclease I TERM 3295 2994352 - 2994332 - T 100 -9.7 -5.49234 | ATAGCCAATAAAAAA CGGAGCC ATTTTCA GGCTCCG TAGAGGTCACAGAGA yeeF 2995873 - 2994485 - | amino acid permease TERM 3296 2994818 - 2994794 - G 71 -8.6 -3.78329 | opp_overlap 2994809 2994809, overlap 2994809 2994810 TGTCACCAAGTCAAA CGAGATAGCA GACAA TGCTACCCCG CCAACCAGCAGTACG TERM 3297 2994851 - 2994810 - G 74 -10.9 -2.74983 | gap 1, opp_overlap 2994809 2994809, overlap 2994794 2994809 GAGATAGCAGACAAT GC-TACCCCGCCAACCAGCA GTA CGTTGATTGCCGGGGTACGC CATTTCGGATGCACG TERM 3298 2995476 - 2995456 - G 77 -3.9 -5.06414 | GCGCGCCAACAAAAA TCCACGATG GCA CACCAGGGA AAATCGCTTCGAGAT YE2760 2996078 - 2995863 - | hypothetical protein TERM 3299 2996217 - 2996192 - R 100 -9.8 -5.54192 | opp_overlap 2996192 2996195 ACGAATGCAAAAAAA TAACCGACGC GTTTAA ACGTCGGTTA TTGCATGGCGCGTAT YE2761 2997418 - 2996327 - | hypothetical protein TERM 3300 2998108 - 2998094 - g 83 -8.6 -4.63928 | opp_overlap 2998099 ACATTAGCCGAAAAA CAACAG GTG CTGTTG GCCCGCGCCCTTTCC YE2762 2997638 - 2999149 + | putative ABC transport system ATP-binding protein YE2763 2999146 - 3000144 + | ribose transport system, permease protein YE2764 3001146 - 3000319 - | hypothetical protein TERM 3301 3001404 - 3001391 - H 78 -2.3 -5.44119 | overlap 3001393 GTCAGGTGAAAAAAA GGTTG CGCG CTACC CGCAGGATGGTTTAC TERM 3302 3001643 - 3001617 - H 100 -21 -4.22414 | opp_overlap 3001617 AACGCAATAGAGAAA GCCCTCGGAAGA TTA TCTTCCGAGGGC TTTTTTGTTGCTCAC TERM 3303 3001617 - 3001643 + H 100 -21 -5.5112 | opp_overlap 3001617 AACGCAATAGAGAAA GCCCTCGGAAGA TTA TCTTCCGAGGGC TTTTTTGTTGCTCAC TERM 3304 3002549 - 3002537 - g 90 -10.5 -4.33653 | opp_overlap 3002535 3002538 3002540 3002548 CATGGAAAAACTAAA GGCGC TAG GCGCC AGCTCTATTCTGGTA hisG 3001692 - 3002591 + | ATP phosphoribosyltransferase hisD 3002595 - 3003920 + | histidinol dehydrogenase hisC 3003917 - 3005041 + | histidinol-phosphate aminotransferase TERM 3305 3005782 - 3005772 - g 71 -8.2 -3.7282 | CGAGGCGATTAACAA CGCC CTG GGCG ACAAACGCGGTATTG hisB 3005038 - 3006105 + | imidazole glycerol-phosphate dehydratase/histidinol phosphatase hisH 3006105 - 3006695 + | imidazole glycerol phosphate synthase subunit HisH TERM 3306 3007040 - 3007073 + G 74 -11.1 -3.04461 | opp_overlap 3007043, overlap 3007043 CCGGCAATGGTGCAA CAATGGTTTGAGCGC TACG GTGCTGAAGCCATTG TATTGGCACTGGATG hisA 3006701 - 3007438 + | 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase hisF 3007420 - 3008196 + | imidazole glycerol phosphate synthase subunit HisF hisI 3008190 - 3008804 + | bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein TERM 3307 3008837 - 3008861 + T 100 -9.3 -5.06414 | opp_overlap 3008837 3008838, overlap 3008838 TTATCAGCAAAAAAA TGCCCTCGA CTCAGCA TCGAGGGCG TTTTTATTAAGGCAA TERM 3308 3008861 - 3008837 - T 100 -7.8 -5.55664 | opp_overlap 3008837 3008838, overlap 3008838 TTATCAGCAAAAAAA TGCCCTCGAC TCAGC ATCGAGGGCG TTTTTATTAAGGCAA TERM 3309 3008838 - 3008860 + T 82 -10.6 -3.63367 | opp_overlap 3008838 3008837, overlap 3008837 TATCAGCAAAAAAAT GCCCTCGA CTCAGCA TCGAGGGC GTTTTTATTAAGGCA TERM 3310 3008860 - 3008838 - T 100 -11.3 -3.92314 | opp_overlap 3008837 3008838, overlap 3008837 TATCAGCAAAAAAAT GCCCTCGAC TCAGC ATCGAGGGC GTTTTTATTAAGGCA TERM 3311 3009070 - 3009086 + T 78 -10.1 -3.5511 | overlap 3009068 TAACTTAAAGCCATT CGGTGTG GAA CACGCCG TCTTTATCAATACGC gnd 3010465 - 3009059 - | 6-phosphogluconate dehydrogenase TERM 3312 3010728 - 3010711 - H 84 -11.3 -3.09635 | opp_overlap 3010709, overlap 3010698 ATGCCGATCAGTTAA GGATCGG TTGA CCGATCC AGTGGTTGTGTAAGA TERM 3313 3010769 - 3010745 - H 73 -8.6 -3.61398 | opp_overlap 3010745 GTGGTTGTGTAAGAA TCCGGAAATG TTCTT CGTTTCCGGA TTTTTTTATGCACAT TERM 3314 3010745 - 3010769 + H 100 -10.8 -5.61596 | opp_overlap 3010745 GTGGTTGTGTAAGAA TCCGGAAATG TTCTT CGTTTCCGGA TTTTTTTATGCACAT TERM 3315 3011588 - 3011546 - g 75 -7.7 -4.19238 | gap 1, overlap 3011547 3011569 TGGTGAAGTTGAAAA CCAGCCCACAGGCCCGGA AAAAGTGG CCCGAGC-TGGGGGCTGA AATGACAGCCCGCCT YE2774 3010777 - 3012114 + | transposase for insertion sequence element IS1660 TERM 3316 3012121 - 3012104 - f 84 -11.3 -3.09635 | opp_overlap 3012102, overlap 3012092 3012091 ATGCCGATCAGTTAA GGATCGG TTGA CCGATCC AGTGGTTGTGTAAGA TERM 3317 3012138 - 3012162 + F 91 -5 -5.61596 | opp_overlap 3012138 GTGGTTGTGTAAGAA TCCAGAAATG TTCTT CGTTTCCGGA TTTTTTTATGCACAT YE2775 3012170 - 3012956 + | transposase for insertion sequence element IS1665 TERM 3318 3012962 - 3012935 - T 100 -17.2 -5.14163 | AGCCAGGAACAAAAA TGCCAGTCAGTT GCTT AACTGACTGGCA TTAACCACATGGATT galF 3013895 - 3013002 - | UTP-glucose-1-phosphate uridylyltransferase galU 3014842 - 3013961 - | UTP-glucose-1-phosphate uridylyltransferase YE2779 3015331 - 3016917 + | hypothetical protein TERM 3319 3016990 - 3016966 - T 95 -12.8 -2.93616 | opp_overlap 3016966, overlap 3016961 ATGATGAAGAGTAGA GCCGGGTCGC TTATT GCCACCCGGC TTTTTTATTGCTGTC TERM 3320 3016966 - 3016990 + T 100 -12.8 -5.5353 | opp_overlap 3016966 3016961 ATGATGAAGAGTAGA GCCGGGTCGC TTATT GCCACCCGGC TTTTTTATTGCTGTC dcuC 3018369 - 3017011 - | C4-dicarboxylate transporter DcuC TERM 3321 3018706 - 3018719 + r 73 -5.3 -4.6856 | opp_overlap 3018706 TGATGCCGTATTAAA GCTTA TCAA TAAGC TTTTTAAGATCTTTA YE2781 3020548 - 3018701 - | putative assembly protein TERM 3322 3019597 - 3019618 + g 77 -10.1 -3.55548 | gap 1, opp_overlap 3019597, overlap 3019610 CTTGAATAGCAATTA CTGGCG-CGG TCA CCGTCGCCGG TTTGGCGGAGTCTTC dcd 3021194 - 3020613 - | deoxycytidine triphosphate deaminase b2066 3021921 - 3021280 - | uridine kinase TERM 3323 3022048 - 3022025 - R 74 -9.5 -3.27951 | opp_overlap 3022025 3022024, overlap 3022023 GATGCCAGTACAATA CCCTGCGCC TTTGAC GCCGCAGGG GTTATGGCTATTACA YE2784 3023171 - 3022059 - | putative ATPase metG 3023451 - 3025478 + | methionyl-tRNA synthetase TERM 3324 3025500 - 3025527 + T 100 -12.1 -5.24531 | gap 1, opp_overlap 3025500 ACTAGCACGCAAAAA TGCCGGTCTTGG AGCAA CCA-GACCGGCA TTTTTTATAACCAAT TERM 3325 3025527 - 3025500 - T 100 -12.1 -4.68994 | gap 1, opp_overlap 3025500 ACTAGCACGCAAAAA TGCCGGTCTTGG AGCAA CCA-GACCGGCA TTTTTTATAACCAAT YE2786 3026394 - 3025558 - | hypothetical protein TERM 3326 3026547 - 3026534 - H 70 -2.5 -4.9138 | opp_overlap 3026523 3026534, overlap 3026523 AGCAGCGAAATAAAA TATTA TCGC TAATA TTTGTCTCAAAAAAT TERM 3327 3027608 - 3027598 - g 71 -4.6 -4.63486 | AGCCTTGCAAGAAAA CGGC CGT ACCG AGATCAAATTGTACA YE2787 3026840 - 3027931 + | putative sugar ABC transporter TERM 3328 3028164 - 3028184 + G 76 -11.1 -3.23692 | opp_overlap 3028165 3028167, overlap 3028165 3028167 TGCCAACACCTGAAT ACAGCCGCA ATA TGCGGCTGA TTGGTCATAGTGATC TERM 3329 3028183 - 3028165 - g 91 -14.6 -3.0976 | opp_overlap 3028165 3028164 3028167, overlap 3028167 GCCAACACCTGAATA CAGCCGCA ATA TGCGGCTG ATTGGTCATAGTGAT TERM 3330 3028165 - 3028183 + G 89 -14.6 -2.53894 | opp_overlap 3028165 3028167, overlap 3028164 3028167 GCCAACACCTGAATA CAGCCGCA ATA TGCGGCTG ATTGGTCATAGTGAT TERM 3331 3028167 - 3028181 + G 76 -11.4 -2.80492 | opp_overlap 3028165 3028167, overlap 3028165 3028164 CAACACCTGAATACA GCCGCA ATA TGCGGC TGATTGGTCATAGTG TERM 3332 3028181 - 3028167 - g 79 -11.4 -3.10499 | opp_overlap 3028167 3028165 3028164, overlap 3028165 CAACACCTGAATACA GCCGCA ATA TGCGGC TGATTGGTCATAGTG YE2788 3028130 - 3029383 + | hypothetical protein TERM 3333 3029430 - 3029387 - f 79 -6.9 -4.62783 | opp_overlap 3029395, overlap 3029395 TATTTAGGTTAAAAA TCTATAAATAGCAGGTCGA TTCAGG TCGATCTGCTATTTGCAAA AAAAATTTCCTCCCC TERM 3334 3029395 - 3029422 + F 89 -11.4 -3.53343 | opp_overlap 3029387 3029395 TTAAAAATCTATAAA TAGCAGGTCGAT TCAG GTCGATCTGCTA TTTGCAAAAAAAATT TERM 3335 3029422 - 3029395 - f 79 -8.5 -4.09459 | opp_overlap 3029395, overlap 3029387 TTAAAAATCTATAAA TAGCAGGTCGA TTCAGG TCGATCTGCTA TTTGCAAAAAAAATT YE2789 3029582 - 3030802 + | putative multidrug resistance protein TERM 3336 3031001 - 3031033 + G 85 -11.3 -3.82946 | overlap 3031014 CCTTGCTGCTGCCCA TCAGCATCCCCGGCA GCA TCCTCGGGATGCTGA TTCTGTTTGCCCTGC TERM 3337 3031014 - 3031032 + G 85 -13.2 -2.89285 | overlap 3031001 CATCAGCATCCCCGG CAGCATCC TCG GGATGCTG ATTCTGTTTGCCCTG yohJ 3030901 - 3031308 + | hypothetical protein TERM 3338 3031742 - 3031758 + G 71 -2.9 -4.8543 | overlap 3031744 3031745 TGGTTTACCGGCCAT CAGCGCA GTG TGCGTTA TTTTTGTCGGGATTC TERM 3339 3031745 - 3031755 + G 77 -6.8 -4.52873 | overlap 3031744 3031742 TTTACCGGCCATCAG CGCA GTG TGCG TTATTTTTGTCGGGA yohK 3031305 - 3032000 + | hypothetical protein TERM 3340 3032628 - 3032644 + G 76 -9.5 -3.71873 | CAATATTTGCCCGAC TCTTTCG GCC CGAAAGA TTTGAATATCACTAC cdd 3032139 - 3033023 + | cytidine deaminase YE2793 3033444 - 3033097 - | putative lipoprotein TERM 3341 3033767 - 3033754 - H 80 -2.5 -5.50499 | overlap 3033755 CGATACGTAAAAAAA TTTTT TAAC AAAAA TACAGCTTTACGGAC TERM 3342 3035002 - 3034986 - g 73 -2.1 -5.01732 | AATTGGTGCAAAAAA GCGATGC GTT GCAAAGC TGGAATCTGACCAGT maeA 3033911 - 3035608 + | malate dehydrogenase sanA 3035775 - 3036578 + | hypothetical protein hypC 3036907 - 3036629 - | putative hydrogenase isoenzymes formation protein hypA 3037295 - 3036948 - | hydrogenase nickel incorporation protein TERM 3343 3037479 - 3037450 - H 72 -9.4 -3.214 | opp_overlap 3037450 3037448 3037475, overlap 3037448 3037451 TTCACGATATGAATA CTCACTGTCGAA GTGTCA TCCGACAGTGAA GATTTCGTCACTATT TERM 3344 3037478 - 3037451 - H 76 -10.7 -2.52519 | opp_overlap 3037450 3037448 3037475, overlap 3037450 3037448 TCACGATATGAATAC TCACTGTCGAA GTGTCA TCCGACAGTGA AGATTTCGTCACTAT hyfA 3037703 - 3038344 + | hydrogenase-4 component A TERM 3345 3039741 - 3039727 - g 73 -3.5 -4.96848 | gap 1, overlap 3039728 3039729 CCGCGTACAGAAAAA GC-CGC CCTT GCGCGC GAAGTCCCCTGGCCG hyfB 3038341 - 3040368 + | hydrogenase 4 subunit B hyfC 3040380 - 3041333 + | hydrogenase-4 component C hyfD 3041352 - 3042821 + | hydrogenase 4 subunit D TERM 3346 3043024 - 3043038 + G 78 -7.8 -4.37092 | CCACGAGCTGTATAT GTGGTC GCT GACCGC TTTTATCACCAAGGT hyfE 3042833 - 3043498 + | hydrogenase 4 membrane subunit TERM 3347 3044683 - 3044699 + G 74 -9.4 -3.70571 | GTGGCGCATTGGCGC TGGCGG GAATG CCGCCA TTTAACGTGTTTATC hyfF 3043503 - 3045140 + | hydrogenase 4 subunit F hyfG 3045142 - 3046947 + | hydrogenase-4 component G hyfH 3046959 - 3047546 + | hydrogenase 4 subunit H TERM 3348 3048068 - 3048056 - g 78 -7.7 -4.4836 | GAACAAAAGTTAAAA GGTGA GGA TCACC AGGAAGCCGCCGATG hyfI 3047543 - 3048349 + | hydrogenase-4 component I hyfJ 3048342 - 3048743 + | hydrogenase-4 component J hycI 3048740 - 3049213 + | hydrogenase 3 maturation protease TERM 3349 3049261 - 3049219 - f 75 -9.1 -3.72141 | gap 1, opp_overlap 3049218 3049219 3049219, overlap 3049220 3049222 ACATTTATAGCTAAA TGAC-GGCATGCCGTCGTCA ATTT TGCCGACGTCATGCCTGCCG ACAGTTTCCTGTTAA TERM 3350 3049260 - 3049220 - f 89 -12.6 -2.82803 | gap 1, opp_overlap 3049219 3049219 3049218, overlap 3049219 3049222 CATTTATAGCTAAAT GAC-GGCATGCCGTCGTCA ATTT TGCCGACGTCATGCCTGCC GACAGTTTCCTGTTA TERM 3351 3049257 - 3049222 - f 86 -11.8 -2.95942 | opp_overlap 3049219 3049219 3049218, overlap 3049220 3049219 TTTATAGCTAAATGA CGGCATGCCGTCGTCA ATTT TGCCGACGTCATGCCT GCCGACAGTTTCCTG TERM 3352 3050155 - 3050138 - g 71 -6.3 -4.20783 | gap 1 ATGCTACGCAAGAAA CAGCTGCG CGC CGCA-CTG GACGAAGCCAACGAG hydN 3049640 - 3050182 + | 4Fe-4S ferrodoxin fdhF 3050211 - 3052358 + | formate dehydrogenase H TERM 3353 3052478 - 3052529 + T 100 -13.7 -3.69434 | GGGCCAATGGTTGAC CACGCC-TAGGGGCACTTCGGCGGC TTAC GCCGCTGACGA-CCCCAACGGCGTG TTTCCCCTTGGTTCA hyfR 3054761 - 3052602 - | putative hydrogenlyase transcriptional activator TERM 3354 3054122 - 3054096 - G 75 -5.1 -4.75308 | gap 1 ATCAATATTGAAAAA GCGGTGTATCTC TTTT GAGAC-CTCCGC CGCTAAAACATCCAA focB 3055206 - 3056060 + | putative formate transporter TERM 3355 3056147 - 3056122 - T 100 -14.1 -4.45485 | gap 1, opp_overlap 3056122 ATGACAGTTAGAAAA GCCAGCC-GAGT TTG ACTCTGGCTGGC TTTCTTGTCTTGCTA TERM 3356 3056122 - 3056147 + T 100 -14.1 -4.4768 | gap 1, opp_overlap 3056122 ATGACAGTTAGAAAA GCCAGCC-GAGT TTG ACTCTGGCTGGC TTTCTTGTCTTGCTA mglC 3057181 - 3056171 - | beta-methylgalactoside transporter inner membrane component mglA 3058722 - 3057202 - | galactose/methyl galaxtoside transporter ATP-binding protein TERM 3357 3057981 - 3057965 - G 71 -6.5 -4.30844 | AGGCGATCAGGAAAA CGCTGAC TCA GTGAGCG CCCAACCATCATGGA TERM 3358 3058865 - 3058818 - R 86 -7.8 -4.7033 | gap 1 CAATGCAACAGAAAA CCTTC-AGCCCCGACACTCGA CGCCCGC TAAAGTACCGGGGCCAGAAGG TTAATATTTCTTTCC mglB 3059910 - 3058918 - | galactose-binding protein galS 3061302 - 3060265 - | DNA-binding transcriptional regulator GalS yeiB 3062650 - 3061484 - | hypothetical protein TERM 3359 3062164 - 3062149 - G 71 -10.4 -2.77962 | overlap 3062148 3062151 GCTCATATTGCAAAT CAGCCG GCCC CGGCTG CCAGAAACGGCCCGG TERM 3360 3062252 - 3062236 - G 75 -5.7 -4.50627 | CACCGAGTAAATAAA GCACGCC ACC GGTGCGC AATAAGCTGGCGGCA folE 3063367 - 3062705 - | GTP cyclohydrolase I TERM 3361 3062802 - 3062821 + g 74 -10 -3.54741 | gap 1 GTGGTCGCACTGGTC GCATCGCGG ATC CCGCGA-GC TTTCACACAATAATG TERM 3362 3063392 - 3063428 + r 75 -7.3 -4.25848 | opp_overlap 3063392 3063407 CAACAGGCATATACA TCTGAGCGAGATAAACA TGA TGTAGATCACGTTCAGA TTTTGCTCCCCACTT YE2819 3064694 - 3063522 - | hypothetical protein TERM 3363 3064802 - 3064790 - H 76 -2.7 -5.39755 | TAGAATCACAAAAAA TGAAT AAT ACTCA CTAAGTTCATCACGG TERM 3364 3065298 - 3065316 + G 79 -11 -3.52207 | overlap 3065287 3065291 3065295 TGAACTGCACGGCTG CCGCTCTT TTG AGGAGCGG TTAGTTATCATTTCC YE2820 3064831 - 3065700 + | LysR family transcriptional regulator YE2821 3065971 - 3067119 + | alcohol dehydrogenase YE2822 3067140 - 3067982 + | putative esterase TERM 3365 3068042 - 3068017 - f 100 -17.7 -4.3587 | opp_overlap 3068017 CAGTAATAATAGAAA CCTCAAGCTCC TTCG GGAGCTTGAGG TTAATGGCAAAGTGC TERM 3366 3068017 - 3068042 + F 100 -17.7 -3.14564 | opp_overlap 3068017 CAGTAATAATAGAAA CCTCAAGCTCC TTCG GGAGCTTGAGG TTAATGGCAAAGTGC TERM 3367 3068200 - 3068213 + F 100 -8.1 -5.62288 | TGTCAGCAGTCTGAA GCTCC TTCG GGAGC TTTTTATTTTATTGC TERM 3368 3068678 - 3068653 - f 100 -12.1 -4.78077 | opp_overlap 3068653 3068676 TTTAATTAAAACAAA TTAAGATGCTA TTAA TAGCATCTTAA TTATAATAATTATTA TERM 3369 3068653 - 3068678 + F 91 -12.1 -3.49756 | opp_overlap 3068653, overlap 3068676 TTTAATTAAAACAAA TTAAGATGCTA TTAA TAGCATCTTAA TTATAATAATTATTA TERM 3370 3069438 - 3069416 - g 82 -10.6 -3.80573 | TTTATCACGATGAAA TCTGGGATGA CCC CCACCCCAGA GCAACTAAATTCTCA TERM 3371 3069608 - 3069622 + G 83 -4.3 -5.36018 | TACTTAAATATTTTA TACAC ATCAG GTGTA TTTATTTTTTTTGCT YE2823 3068765 - 3071137 + | hypothetical protein YE2824 3071142 - 3072404 + | hypothetical protein TERM 3372 3072857 - 3072874 + G 74 -11.3 -2.87211 | opp_overlap 3072853 AACAACAACGAGTCG CCATCGC CAGA GCGATGG TATCTAACCCCGCAT YE2825 3072406 - 3073065 + | ABC transporter ATP-binding protein TERM 3373 3073483 - 3073496 + G 73 -2.4 -5.01732 | overlap 3073460 GCGGTGAAATCACAC TGCT AAAGCC AGCA TTTTTTAAAAAACTT YE2826 3073083 - 3074393 + | putative heme-binding protein YE2827 3075040 - 3074501 - | hypothetical protein bisB 3075244 - 3076479 + | molybdopterin biosynthesis protein MoeA chlN 3076519 - 3077304 + | molybdopterin biosynthesis protein MoeB TERM 3374 3077410 - 3077435 + F 75 -3.1 -5.17576 | overlap 3077411 3077413 AATTTTGATATCGCT CTGCGGGGGTC AATT GCCTCCCGTAC TTTTTTGGATTCCTA TERM 3375 3077667 - 3077682 + F 76 -7.6 -4.22009 | TTATTGGAGTTGAAT GCTATC TGGA GATAGC TTTATGTTGCATCCT TERM 3376 3077825 - 3077813 - g 74 -2.6 -5.00895 | CTCAGCATACAAAAA CGGC GAATA GCCA TAATACTGCTGAAGC TERM 3377 3079698 - 3079672 - g 100 -9.4 -4.84017 | overlap 3079660 AAGCCGGTAGAAAAA CCAGTACAGTGC AGC GCACCATCCTGG GAAGAGAAAGTCTAT YE2830 3077686 - 3080112 + | hypothetical protein TERM 3378 3080142 - 3080158 + T 100 -13.7 -3.62275 | opp_overlap 3080142 CCATAATGGTTTAAA GGCAGGG TTA CCCTGCC TTTAGACTGCTAAGT TERM 3379 3080158 - 3080142 - T 100 -13.7 -3.58533 | opp_overlap 3080142 CCATAATGGTTTAAA GGCAGGG TTA CCCTGCC TTTAGACTGCTAAGT ybiT 3081818 - 3080223 - | ABC transporter ATP-binding protein TERM 3380 3081025 - 3081042 + g 75 -3.3 -5.10208 | overlap 3081026 CTAACGAAAGATTGC AGCTCAG AGAT CTGGGCC TTTTTCTTAGCATTA YE2832 3083407 - 3081998 - | hypothetical protein YE2833 3084403 - 3083465 - | hypothetical protein TERM 3381 3084367 - 3084382 + g 74 -9 -3.68836 | CAAGTTTAGTATCAT GCAGCA TAGG TGCTGC TTGTTCACTGAGTGT YE2834 3084900 - 3085592 + | hypothetical protein TERM 3382 3085638 - 3085653 + T 89 -6.1 -5.26316 | opp_overlap 3085627 3085629 3085638 GACAGACGAAAAAAA TCCGC CCGAAA GCGGA TTTTTTATCAAATAC TERM 3383 3085653 - 3085638 - T 100 -6.8 -5.60864 | opp_overlap 3085638, overlap 3085627 3085629 GACAGACGAAAAAAA TCCGCC CGAA AGCGGA TTTTTTATCAAATAC ompX 3086241 - 3085714 - | outer membrane protein X TERM 3384 3086014 - 3086024 + g 73 -2.4 -5.1287 | AACAGACGCGCTATC GCCG AAG CTGC TTTTTTCAGTGTGAG YE2836 3086589 - 3086365 - | hypothetical protein TERM 3385 3086896 - 3086908 + G 75 -3.4 -5.13473 | GGGGTGACCTTAGGT GGAA TGAAT TTCC TTTTTTACCTCTCAT YE2837 3086644 - 3087531 + | threonine and homoserine efflux system YE2838 3087545 - 3088036 + | hypothetical protein TERM 3386 3088083 - 3088109 + F 95 -5.1 -5.87996 | gap 1 ATTTATGAATAGCAC GCCAGCCC-AGT CATT ACGCGGGTTGGC TTTTTTTATTCATTA TERM 3387 3088161 - 3088207 + F 74 -10.2 -2.59431 | overlap 3088158 AAAACACCCTGCTGA TTCGTATAGGTAGATGTGAGGC AAG GCTTCACCTCAACCTACAGGAA TACATTATGAAAACG YE2839 3088214 - 3088774 + | hypothetical protein TERM 3388 3088782 - 3088816 + F 81 -7.3 -4.62471 | gap 2, opp_overlap 3088777, overlap 3088785 3088787 3088788 CTAAATAAAACCGGT CTATACTGGGTGCAGTG TCT CACTGCACCT-G-ATGG TTTTTAGGGATTGGC TERM 3389 3088785 - 3088815 + F 71 -9 -3.37 | opp_overlap 3088777, overlap 3088782 3088787 3088788 AATAAAACCGGTCTA TACTGGGTGCAGTG TCT CACTGCACCTGATG GTTTTTAGGGATTGG TERM 3390 3088787 - 3088813 + F 74 -9.4 -3.24823 | opp_overlap 3088777, overlap 3088785 3088782 3088788 TAAAACCGGTCTATA CTGGGTGCAGTG TCT CACTGCACCTGA TGGTTTTTAGGGATT TERM 3391 3088788 - 3088812 + F 90 -12.9 -2.54171 | opp_overlap 3088777, overlap 3088787 3088785 3088782 AAAACCGGTCTATAC TGGGTGCAGTG TCT CACTGCACCTG ATGGTTTTTAGGGAT YE2840 3088834 - 3089388 + | putative RNA polymerase sigma factor YE2841 3089385 - 3090050 + | hypothetical protein tam 3090075 - 3090851 + | trans-aconitate 2-methyltransferase TERM 3392 3091480 - 3091470 - g 73 -2.4 -5.08824 | opp_overlap 3091474, overlap 3091473 TGGTGACTGAAAAAA CACC GTT GGAG AGCTATCCAACTCGT dps 3091166 - 3091675 + | DNA starvation/stationary phase protection protein Dps TERM 3393 3091756 - 3091777 + F 78 -10.1 -3.56099 | opp_overlap 3091751 3091756, overlap 3091761 TTGAAGAAAATGAAA CAGGGCCGG TGAT CCGGTTCTG TTTACGGAGGTTATA TERM 3394 3091777 - 3091756 - f 70 -5.7 -4.3295 | opp_overlap 3091756 3091761, overlap 3091751 TTGAAGAAAATGAAA CAGGGCCGG TGAT CCGGTTCTG TTTACGGAGGTTATA TERM 3395 3091761 - 3091772 + F 70 -7.2 -3.81488 | opp_overlap 3091756 3091751, overlap 3091756 GAAAATGAAACAGGG CCGG TGAT CCGG TTCTGTTTACGGAGG YE2844 3091792 - 3092058 + | hypothetical protein glnH 3092445 - 3093188 + | glutamine ABC transporter periplasmic protein glnP 3093255 - 3093911 + | glutamine ABC transporter permease protein TERM 3396 3094485 - 3094497 + G 78 -9.1 -4.07687 | opp_overlap 3094494, overlap 3094477 CTATGGTCATCGTCA CCCAC GAA GTGGG TTTTGCCCAAAAAGT glnQ 3093908 - 3094630 + | glutamine ABC transporter ATP-binding protein TERM 3397 3094778 - 3094804 + T 73 -10.1 -2.97771 | gap 1, overlap 3094777 CCTTCCCTGGGGGCT CGACCCGCGCCA TCCG TGGCGCGGA-CG CTTTACTCTTCTACC TERM 3398 3094868 - 3094891 + T 100 -12.5 -5.67063 | TTGTCAACAGTCTGG GCGGGTATC TTTACT GATACCCGC TTTTTTTGTGCTAAC YE2848 3096145 - 3094913 - | putative chemotactic transducer YE2849 3097779 - 3096772 - | putative SAM-dependent methyltransferase TERM 3399 3098080 - 3098090 + G 73 -5.4 -4.63527 | TTTAGTGACCGCCCA CCAA TTA TTGG TTTTTCCAGTAGTGG TERM 3400 3098352 - 3098340 - g 75 -3.4 -5.09895 | CATTCAGTTAAAAAA TGCT GAAGG AGCA GTAATTGATAACTGG YE2850 3097906 - 3098547 + | hypothetical protein TERM 3401 3098858 - 3098848 - g 83 -6.8 -4.8543 | CAACTGGCAGAAAAA GCAG ATG CTGC AGGTGCTAAAGCCTT YE2851 3098674 - 3098934 + | hypothetical protein TERM 3402 3099038 - 3099060 + T 100 -13.5 -5.36441 | opp_overlap 3099038 GCTGTAAGAGAAAAA GCCCATCAG CAAAC CTGATGGGC TTTTTTATATAAAAA TERM 3403 3099060 - 3099038 - T 100 -13.5 -5.0916 | opp_overlap 3099038 GCTGTAAGAGAAAAA GCCCATCAG CAAAC CTGATGGGC TTTTTTATATAAAAA YE2852 3100948 - 3099086 - | putative peptidase ybiB 3102147 - 3101167 - | hypothetical protein TERM 3404 3101252 - 3101265 + g 71 -3.8 -4.66609 | opp_overlap 3101252 CCCGCGGCAACTAAA CAGC ATGCCA GCTG TTTTTGGATAGAGTC TERM 3405 3102349 - 3102313 - R 78 -10.1 -3.53012 | opp_overlap 3102313 3102311 3102305, overlap 3102291 GTTTGCGGGGGGAAA CAGGCCACTGCTGAG GATGAAG CACCGCAGTGACCTG TATATCTCTATCTAT aqpZ 3103061 - 3102357 - | aquaporin Z TERM 3406 3102787 - 3102773 - G 75 -5.6 -4.82128 | overlap 3102775 CGATTAAATACAAAA TTGCCG CCC CGGCTA GCCCCCCCAGTACTT dinG 3105555 - 3103372 - | ATP-dependent DNA helicase DinG TERM 3407 3105732 - 3105711 - H 95 -13.1 -3.15544 | overlap 3105696 GCTCATCGGGATTAA TGAGCCTCA TCCC TGAGGCTCA CCCTGCGGGCAGCAT TERM 3408 3106792 - 3106802 + G 71 -8.2 -3.76884 | TATGACGCCTATTTC CGGC ACT GCCG TTATTAATAATGTCT ompC2 3105995 - 3107110 + | outer membrane protein C2 TERM 3409 3107201 - 3107220 + T 100 -15 -5.19328 | AAGTCATCACATTTT GCCGGGAG ATCC CTCCCGGC TTTTTATTATCCACT YE2857 3108544 - 3107234 - | hypothetical protein TERM 3410 3107421 - 3107431 + g 73 -3.2 -4.91657 | ATATGATCAAGACTA TGGT AGG GCCA TTTGTTTTGTTCGTT TERM 3411 3108581 - 3108597 + H 70 -5.1 -4.43844 | opp_overlap 3108579 AATTGTCATATAAGC TCAGTTG AGC CACCTGA TTTTATGCATCATGC YE2858 3108825 - 3109715 + | hypothetical protein YE2859 3110884 - 3109970 - | LysR family transcriptional regulator YE2860 3110994 - 3111740 + | putative short chain dehydrogenase YE2861 3112799 - 3111996 - | hypothetical protein YE2862 3113559 - 3112831 - | putative ABC transport integral membrane subunit TERM 3412 3113413 - 3113400 - G 77 -3.8 -5.08601 | TCACCCCAATAAAAA CAGC GATAAT GCTG GAAATTAGCACCAGG TERM 3413 3113526 - 3113512 - G 81 -3.4 -5.43866 | overlap 3113513 TAACGCCGAAAAAAA GCCCCC CAA GGAGGT CATACCAAAAACCAG YE2863 3114602 - 3113658 - | putative ABC transport ATP-binding subunit YE2864 3115753 - 3114599 - | putative ABC transport integral membrane subunit TERM 3414 3115775 - 3115759 - R 71 -3 -5.07275 | TTACAGACATAAAAA TCTATC TCCAT GACAGA TAATCCTAAACGAAA YE2865 3116794 - 3115862 - | putative substrate-binding transport protein TERM 3415 3116407 - 3116431 + g 71 -2.8 -4.98911 | gap 1 TCCAGGTATTGTTCG CTGGTGCCGGT GAAA GCCA-CACCAG TTTATTTTTCTCATA TERM 3416 3116533 - 3116522 - G 76 -2.2 -5.25699 | ATCAGAGAAGAAAAA GGCA CCAT TACC CGTGTATTCAGGGTA YE2866 3118220 - 3117162 - | putative fatty acid desaturase TERM 3417 3117761 - 3117738 - G 72 -6.1 -4.386 | opp_overlap 3117738 TAATCGGCCAGAAAA GGTATTGCT AATACG AACAATACC TTTGAATAATTGCGG YE2867 3119507 - 3118377 - | hypothetical protein TERM 3418 3119177 - 3119198 + g 73 -5.1 -4.59773 | gap 1 CCATTTCTTTGGCAT CTGC-GGCAT TAA GTGCCAGCGG TTTTTCGGAATAAAC YE2868 3119899 - 3120753 + | putative sulfurtransferase YE2869 3121458 - 3120760 - | putative ABC transport ATP-binding subunit TERM 3419 3120897 - 3120883 - G 71 -4.3 -4.67635 | GGCAAAATCATAAAA TTGCT CAACC AGCAA AATAGCCATATCCCC TERM 3420 3121075 - 3121061 - G 70 -7.8 -3.85698 | opp_overlap 3121061 3121062 TGCCCGCCCGATAAA TCACCG CCG CGGCGA TGTTTCATTTCCTGC TERM 3421 3121513 - 3121501 - R 82 -6.9 -4.75288 | CGATATGAAAAGAAA GCGGC GCA ACCGC TGTGAATCAAGGCGC YE2870 3122422 - 3121586 - | putative ABC transport ATP-binding subunit YE2871 3123495 - 3122419 - | branched chain amino acid ABC transporter permease TERM 3422 3123141 - 3123122 - G 70 -2.1 -4.88405 | overlap 3123124 AACGCCCAAATAAAA TATTGGC TACCAC GCCAAAA CCACGGCAATTCAGA TERM 3423 3123319 - 3123301 - G 70 -9.6 -3.1544 | CCACACCAGATCTAA TGCAATGG CAA CCACTGCA TAACACAGAATCTTA YE2872 3125096 - 3123495 - | branched chain amino acid ABC transporter permease TERM 3424 3125162 - 3125131 - R 76 -8 -4.13963 | gap 1, overlap 3125132 ATGTGCCAAAAAAGA GCCGGAGGCAG-CAA CAT TTGACTGACTCCGGA GAGTCGGCGCTACTG TERM 3425 3125161 - 3125132 - R 84 -11.5 -3.07655 | gap 1, overlap 3125131 TGTGCCAAAAAAGAG CCGGAGGCAG-CAA CAT TTGACTGACTCCGG AGAGTCGGCGCTACT TERM 3426 3125189 - 3125201 + r 87 -5.5 -5.42265 | ACTGGGTAGTTTTCA CTGGA TGG TCCGG TTTTTTGTCATTTCC YE2873 3126440 - 3125172 - | putative substrate-binding periplasmic transport protein TERM 3427 3126710 - 3126736 + r 70 -8 -3.7331 | opp_overlap 3126711, overlap 3126708 3126711 3126713 GCTAATTAACGAAAA ACAGGAATAGCA AAT TGCTACTCCTGC TCTTTTACTGGCAAT TERM 3428 3126735 - 3126711 - R 100 -13.7 -4.93547 | opp_overlap 3126711 3126710 3126708 3126713 CTAATTAACGAAAAA CAGGAATAGCA AAT TGCTACTCCTG CTCTTTTACTGGCAA TERM 3429 3126711 - 3126735 + r 81 -11.5 -2.83504 | opp_overlap 3126711, overlap 3126710 3126708 3126713 CTAATTAACGAAAAA CAGGAATAGCA AAT TGCTACTCCTG CTCTTTTACTGGCAA YE2874 3127254 - 3126784 - | hypothetical protein TERM 3430 3127506 - 3127526 + r 74 -4.9 -4.88407 | opp_overlap 3127506 AATTATTAGAATAGA TATTAAATT TTA GATTTAATA TTTTTGATTGGCTGA YE2875 3128413 - 3127508 - | putative ABC transport membrane permease YE2876 3129216 - 3128413 - | putative ABC transport membrane permease TERM 3431 3129319 - 3129298 - R 90 -7.3 -5.1101 | CTACCACCTAAAAAA TAGCTCCAG CAAG CCAGAGCTA AACTATTTTTATTCG YE2877 3130274 - 3129345 - | putative substrate-binding periplasmic transport protein YE2878 3131147 - 3130311 - | putative ABC transport ATP-binding subunit YE2879 3131619 - 3131344 - | hypothetical protein YE2880 3132850 - 3131747 - | hypothetical protein YE2881 3133227 - 3133568 + | hypothetical protein TERM 3432 3133649 - 3133663 + T 100 -10 -4.60292 | opp_overlap 3133647 AGAAACCCAATAGCT GTCGGT ATG ACCGAC TTTCTTGTTGTTCTG cyaB 3134171 - 3133632 - | adenylate cyclase 2 TERM 3433 3135681 - 3135695 + G 79 -11.4 -3.12351 | TACATCGTTTTGCTG CGGCTG GGG CAGCCG TTCGCTATCACGCAG dld 3134372 - 3136084 + | D-lactate dehydrogenase TERM 3434 3136417 - 3136370 - T 70 -7.2 -3.76224 | gap 1, opp_overlap 3136377 3136413, overlap 3136372 3136377 GCGCCATTTATTAAA TATT-ATAGGCAGAATTTGCCAG TCA CTCGCAAACTCTGCCTTTCAATT ATCAATTGCTGTATT TERM 3435 3136414 - 3136372 - T 89 -11.4 -3.46647 | opp_overlap 3136377 3136413, overlap 3136370 3136377 GCCATTTATTAAATA TTATAGGCAGAATTTGCCAG TCA CTCGCAAACTCTGCCTTTCA ATTATCAATTGCTGT TERM 3436 3136377 - 3136409 + T 100 -13.5 -3.81741 | opp_overlap 3136372 3136370 3136377 TTATTAAATATTATA GGCAGAATTTGCCAG TCA CTCGCAAACTCTGCC TTTCAATTATCAATT TERM 3437 3136409 - 3136377 - T 100 -15.7 -2.98479 | opp_overlap 3136377, overlap 3136372 3136370 TTATTAAATATTATA GGCAGAATTTGCCAG TCA CTCGCAAACTCTGCC TTTCAATTATCAATT pbpG 3137367 - 3136432 - | D-alanyl-D-alanine endopeptidase TERM 3438 3138366 - 3138348 - g 71 -4.6 -4.49644 | ATTAAAAAGCTAAAA CATCAG GAAAAGG CTGATG GTAAGCTACTTTACG YE2885 3137850 - 3138482 + | hypothetical protein YE2886 3139489 - 3138551 - | tRNA-dihydrouridine synthase C TERM 3439 3139661 - 3139634 - R 100 -17.2 -3.32769 | opp_overlap 3139634, overlap 3139627 CCCCGAAAGGAGTAA TGCCAGTCAGTT AAGC AACTGACTGGCA TTTTTGTTCCTGGCT TERM 3440 3139634 - 3139661 + r 100 -17.2 -5.14163 | opp_overlap 3139627 3139634 CCCCGAAAGGAGTAA TGCCAGTCAGTT AAGC AACTGACTGGCA TTTTTGTTCCTGGCT YE2888 3140426 - 3139640 - | transposase for insertion sequence element IS1665 TERM 3441 3140458 - 3140434 - R 100 -13 -5.61596 | opp_overlap 3140434 ATGTGCATAAAAAAA TCCGGAAATG AAGAA CATTTCCGGA TTCTTACACAACCAC TERM 3442 3140434 - 3140458 + r 100 -13 -3.61398 | opp_overlap 3140434 ATGTGCATAAAAAAA TCCGGAAATG AAGAA CATTTCCGGA TTCTTACACAACCAC TERM 3443 3140475 - 3140492 + r 84 -11.3 -3.07935 | opp_overlap 3140473 TCTTACACAACCACT GGATCGG TCAA CCGATCC TTAACTGACTGGCAT rhlE 3141904 - 3140549 - | ATP-dependent RNA helicase RhlE TERM 3444 3141078 - 3141111 + g 74 -11.1 -2.76815 | overlap 3141086 TGACTCTTGTTACCG TGAATAGCGGCGGCA GTAA TGCCGTCTTTATTCA ATTGTTCAGCCAAAT TERM 3445 3141086 - 3141103 + g 80 -9.1 -4.29073 | overlap 3141078 GTTACCGTGAATAGC GGCGGCA GTAA TGCCGTC TTTATTCAATTGTTC YE2890 3142308 - 3143015 + | putative DNA-binding transcriptional regulator YE2891 3143202 - 3144188 + | hypothetical protein TERM 3446 3145111 - 3145142 + G 81 -13 -2.90615 | overlap 3145108 3145113 GAGGATGCCTTTATT GACTTGCTGGGCGG TGGC CCGGCCAGTGAGTC TGCTTTGGCAAAAAT TERM 3447 3145620 - 3145606 - g 83 -11.4 -3.53012 | overlap 3145609 CCGCTTGGGTTCAAA CAGCGC CTG GCGCTG GCATGCGCCCTGATG YE2892 3144202 - 3145953 + | putative ABC transporter ATP-binding protein YE2893 3145950 - 3147140 + | hypothetical protein TERM 3448 3147847 - 3147887 + G 76 -9.2 -3.89903 | gap 1, opp_overlap 3147840, overlap 3147850 3147854 TCGGTAAAGCGGTTC CAGCGCTGATAGTAGCC ACATTCCA GGCTACTATC-GTGTTG TTTATCGGGATATTT TERM 3449 3147850 - 3147884 + G 71 -7.3 -4.07133 | gap 1, opp_overlap 3147840, overlap 3147847 3147854 GTAAAGCGGTTCCAG CGCTGATAGTAGCC ACATTCCA GGCTACTATC-GTG TTGTTTATCGGGATA YE2894 3147174 - 3148280 + | hypothetical protein TERM 3450 3148346 - 3148328 - T 100 -13.2 -5.1971 | opp_overlap 3148322 3148331 ACCAAAAAGCAAAAA GGACACCA ATC TGGTGTCC TTGAGGTTAATGACA YE2895 3149307 - 3148597 - | hypothetical protein MoaE 3149906 - 3149451 - | molybdopterin synthase large subunit TERM 3451 3149693 - 3149720 + g 80 -4.8 -5.00895 | AGGGCCAGCGGCTGC GCGCTTGAGCAA TAAT TTCTTCCAGCGC TTTTTCTGTCATCCC moaD 3150151 - 3149906 - | molybdopterin synthase small subunit moaC 3150627 - 3150148 - | molybdenum cofactor biosynthesis protein C moaA 3151639 - 3150659 - | molybdenum cofactor biosynthesis protein A TERM 3452 3150807 - 3150795 - G 75 -7.7 -4.16016 | TCACTGGCCAACAAA TCACG CAG CGTGA TGCCCTGCTCGCCAA TERM 3453 3151437 - 3151449 + g 81 -3.3 -5.47159 | overlap 3151438 ATAGAGGGCTCGCCC CCCGT CAA ACGGA TTTTTTCTGTTCCCA TERM 3454 3151479 - 3151468 - G 71 -7.2 -4.07568 | overlap 3151476 TTTCTGTTCCCAAAA GGGC AAAT GCCC GGCTGACGCGGCTTA TERM 3455 3152106 - 3152091 - H 75 -5.4 -4.84527 | overlap 3152093 TTTAGACAGGAAAAA TATGCG AAAT CGCACA TTAGCGGACTTCGAT YE2900 3152092 - 3153015 + | hypothetical protein YE2901 3153278 - 3153030 - | hypothetical protein uvrB 3155359 - 3153347 - | excinuclease ABC subunit B TERM 3456 3155722 - 3155702 - H 76 -11.1 -2.53747 | opp_overlap 3155705, overlap 3155690 3155699 GAATCCGGACAACAG GAGCGGAAG CCG CGTCCGCTC TCGGCTGCCATCAGT TERM 3457 3156668 - 3156678 + G 73 -4.6 -4.8143 | TAAATCACGCCATAT CCCG GGC TGGG TTTTTGAGTTGTTCC YE2903 3156324 - 3157031 + | putative amino acid transporter TERM 3458 3157083 - 3157105 + T 93 -10.7 -4.07687 | opp_overlap 3157082 3157081 ACCAGACGAAATAGT GGGCTAATA CTTGT TATTAGCCC TTTTAACCACCAAAT bioD 3157790 - 3157143 - | dithiobiotin synthetase bioC 3158595 - 3157849 - | biotin synthesis protein BioC bioF 3159796 - 3158645 - | 8-amino-7-oxononanoate synthase bioB 3160848 - 3159796 - | biotin synthase TERM 3459 3160577 - 3160565 - G 100 -9.1 -4.96848 | opp_overlap 3160567 GCTCCCATACAAAAA CGGGT TGA ACCCG CAGCCTTGGCTTTTT TERM 3460 3162082 - 3162092 + G 71 -4.6 -4.63218 | overlap 3162079 GTTAACGTCGCTCGC CTGC AAC GCGG TTTTGTTGAACAAGG bioA 3160948 - 3162225 + | adenosylmethionine--8-amino-7-oxononanoate transaminase YE2909 3163344 - 3162343 - | 6-phosphogluconolactonase YE2910 3163758 - 3164579 + | phosphotransferase TERM 3461 3164657 - 3164682 + T 80 -8.9 -3.9534 | gap 1 CTCCCCTGGGGGCTT GAG-CCGCGCCG TCC TGGCGCGGACGC TTTATGCCTCTGCCT modC 3165803 - 3164739 - | molybdate transporter ATP-binding protein modB 3166492 - 3165797 - | molybdate ABC transporter permease protein TERM 3462 3165894 - 3165921 + g 74 -9 -3.76393 | gap 1, opp_overlap 3165890 3165892 3165893 GCAATAATACACAGC CGCGCCGCCGCCG CTT CAGCGCCGG-GCG TTTCAATTAGGGTGT TERM 3463 3166099 - 3166085 - G 73 -5.6 -4.59773 | opp_overlap 3166087, overlap 3166087 CGTGATGGTGAAAAA CACCCG CCA CGGGTT TGCCCCGAGGGTACG TERM 3464 3166097 - 3166087 - G 73 -8.2 -3.91506 | opp_overlap 3166087, overlap 3166085 TGATGGTGAAAAACA CCCG CCA CGGG TTTGCCCCGAGGGTA TERM 3465 3166340 - 3166305 - G 78 -9 -4.03141 | overlap 3166312 ATCAGCAGCAAATAA CCAATAACCACTGGCG GCAG CACCAGTGGTAAGTGA ATAATACTATCTAAC TERM 3466 3166333 - 3166312 - G 91 -12.3 -3.93237 | overlap 3166305 GCAAATAACCAATAA CCACTGGCG GCAG CACCAGTGG TAAGTGAATAATACT modA 3167268 - 3166492 - | molybdate transporter periplasmic protein TERM 3467 3167446 - 3167411 - R 100 -9 -5.30339 | opp_overlap 3167417, overlap 3167417 AGCAAAAGATAAAAA CGAAAATGCCCAGCGT CAAT ACGCCAGGCATTTATG AAATAGAGACAACTG TERM 3468 3167440 - 3167417 - R 100 -11 -4.84033 | opp_overlap 3167417, overlap 3167411 AGATAAAAACGAAAA TGCCCAGCGT CAAT ACGCCAGGCA TTTATGAAATAGAGA YE2913A 3167625 - 3167485 - | hypothetical protein modE 3167860 - 3168651 + | DNA-binding transcriptional regulator ModE TERM 3469 3168765 - 3168753 - f 75 -9.1 -3.58329 | opp_overlap 3168764 TAAAGACGCCGTAAA CCCCT CCC AGGGG GCTCGAGCCGCGCGC modF 3168942 - 3170435 + | putative molybdenum transport ATP-binding protein ModF YE2916 3170637 - 3171455 + | hypothetical protein TERM 3470 3171820 - 3171834 + G 73 -10 -3.4072 | opp_overlap 3171819 TGCAATTGATTGAAG CTGGCT ATC AGCCAG TTATCCTCGACAATC galD 3171753 - 3172769 + | UDP-galactose-4-epimerase galB 3172779 - 3173885 + | galactose-1-phosphate uridylyltransferase galA 3173885 - 3175036 + | galactokinase galM 3175030 - 3176094 + | aldose 1-epimerase psiF 3176269 - 3176604 + | putative starvation-inducible protein YE2922 3176908 - 3178587 + | putative protease TERM 3471 3179231 - 3179212 - g 73 -3.6 -4.95758 | gap 1, overlap 3179216 3179223 ATCACACCACAAAAA GCAGCCTTA AAC CAAGG-TGC ATGGGTGAGGCTCGA nuc 3178753 - 3179604 + | DNA/RNA non-specific endonuclease TERM 3472 3180345 - 3180322 - g 74 -11 -2.88434 | gap 1, opp_overlap 3180322, overlap 3180321 3180324 AAGAAGTGATCAAAC CACGCATCGCC AGT GGCGA-GCGCG TTATCATCGCTGCTC gpm 3179811 - 3180563 + | phosphoglycerate mutase 1 TERM 3473 3180590 - 3180615 + T 100 -9.7 -5.06414 | gap 1, opp_overlap 3180590 TAGTAGCATAAAAAA CCCCCGTACATC TCA GATGC-CGGGGG TTTTTATTGACCAGC TERM 3474 3180615 - 3180590 - T 100 -11.9 -5.32882 | gap 1, opp_overlap 3180590 TAGTAGCATAAAAAA CCCCCGTACATC TCA GATGC-CGGGGG TTTTTATTGACCAGC aroG 3181748 - 3180666 - | phospho-2-dehydro-3-deoxyheptonate aldolase TERM 3475 3181308 - 3181290 - G 100 -11 -4.72333 | AATCATATCCAAAAA CTCACCGG CAG CCGGTAAG CCGCTCTCATTAATA TERM 3476 3181415 - 3181427 + g 77 -6.9 -4.59773 | opp_overlap 3181415 GACCTTTCCAACCCA CCGTG GTA CGCGG TTTTTCAAAATAGAC YE2926 3181963 - 3182895 + | zinc transporter ZitB TERM 3477 3182899 - 3182941 + T 71 -8.5 -3.53343 | gap 1, overlap 3182900 CACCATCATTGATGT CATCAGTCAGGCGA-ATGCT TTGG AGCACCTCGCCTGACTGACA TTTCCAGCAACAGTT TERM 3478 3182900 - 3182940 + T 83 -12 -2.71791 | gap 1, overlap 3182899 ACCATCATTGATGTC ATCAGTCAGGCGA-ATGCT TTGG AGCACCTCGCCTGACTGAC ATTTCCAGCAACAGT pnuC 3183699 - 3182971 - | intergral membrane NMN transport protein PnuC TERM 3479 3183669 - 3183636 - G 76 -8.9 -3.794 | gap 1, overlap 3183638 3183643 CTTCAATCCATGAAA GATCATA-CCCGCCGG TAC CCAGCGGAATATGAAC CAATATATTACTGGT TERM 3480 3183667 - 3183638 - G 77 -10.1 -3.48105 | gap 1, overlap 3183636 3183643 TCAATCCATGAAAGA TCATA-CCCGCCGG TAC CCAGCGGAATATGA ACCAATATATTACTG TERM 3481 3183661 - 3183643 - G 72 -10.2 -2.98479 | overlap 3183638 3183636 CCATGAAAGATCATA CCCGCCGG TAC CCAGCGGA ATATGAACCAATATA nadA 3185008 - 3183947 - | quinolinate synthetase TERM 3482 3185870 - 3185884 + r 78 -10 -3.55368 | ACTCGCCCTTCGGGT CAACGC TAC GCGTTG TTGTCTCGCTTCGCT TERM 3483 3186143 - 3186109 - R 76 -9.3 -3.53012 | TCTTCGTTCGCCAAA GCCCAGAAACTAGTC AATAA GACCGATTCCTGGGC TCGAAAAAGGCTAAA YE2930 3186963 - 3186154 - | hypothetical protein excC 3187479 - 3186973 - | peptidoglycan-associated outer membrane lipoprotein tolB 3188820 - 3187528 - | translocation protein TolB tolA 3190100 - 3188940 - | cell envelope integrity inner membrane protein TolA TERM 3484 3189258 - 3189282 + g 81 -10.8 -3.70919 | GGCAGCAGCAGCGCC TGCACCGGAA CCACT TTTCGGTGCA TTCTTGGAATTTGCC TERM 3485 3189328 - 3189350 + g 95 -7.6 -5.46657 | opp_overlap 3189314 3189313 3189316, overlap 3189327 TCATCAACATCTGTT GCTGCTGAGG CTT CTGCGGCAGC TTTTTTCTTGGCCTC TERM 3486 3189361 - 3189377 + g 75 -3.5 -5.07567 | overlap 3189365 GCAGCTTTTTTCTTG GCCTCAG CGG CAGCGGC TTTTTTAGCATCTGC TERM 3487 3189436 - 3189470 + g 71 -6.9 -4.19678 | overlap 3189415 3189438 GCTTTCTTTTCAGCG GCGGCTGTTGCAGCC TTTTC GGCAGCATCTGCGGC TTTCTTCGCATCTGC TERM 3488 3189438 - 3189450 + g 78 -9.1 -4.08394 | overlap 3189415 3189436 TTTCTTTTCAGCGGC GGCTG TTG CAGCC TTTTCGGCAGCATCT tolR 3190625 - 3190197 - | colicin uptake protein TolR tolQ 3191324 - 3190638 - | colicin uptake protein TolQ YE2936 3191725 - 3191324 - | acyl-CoA thioester hydrolase YbgC TERM 3489 3191837 - 3191810 - R 76 -7 -4.57218 | overlap 3191813 AGAATAGAACGAAAA TAATTATGGGCC AGGC GGCCCATAAGGA GAGATTGTGTTCAGA TERM 3490 3191834 - 3191813 - R 100 -13.1 -4.36586 | overlap 3191810 ATAGAACGAAAATAA TTATGGGCC AGGC GGCCCATAA GGAGAGATTGTGTTC YE2937 3192205 - 3191873 - | hypothetical protein TERM 3491 3192109 - 3192125 + g 100 -15.1 -3.36803 | opp_overlap 3192109 CGAGTACCAGTGAAA GGGCCCG CAG CGGGCCC TTATCCATCAAATTG TERM 3492 3192125 - 3192109 - G 100 -15.1 -3.69323 | opp_overlap 3192109 CGAGTACCAGTGAAA GGGCCCG CAG CGGGCCC TTATCCATCAAATTG cydB 3193436 - 3192297 - | cytochrome D ubiquinol oxidase subunit II cydA 3195019 - 3193451 - | cytochrome D ubiquinol oxidase subunit I YE2940 3195608 - 3197506 + | putative 5'-nucleotidase TERM 3493 3197538 - 3197521 - T 100 -12.7 -4.75372 | ATTAGGTATTAAAAA GGCCACC GCAA GGTGGCC TCAGGTGTCGAACTA sucD 3198456 - 3197578 - | succinyl-CoA synthetase subunit alpha sucC 3199622 - 3198456 - | succinyl-CoA synthetase subunit beta TERM 3494 3199772 - 3199758 - R 71 -10 -2.57795 | opp_overlap 3199743 3199756 3199754 3199758, overlap 3199743 3199754 TCCAGCAGTAAGCGA GCTGGA TCT TCCAGC ATCTCTTTCACCGTC TERM 3495 3199758 - 3199772 + r 70 -10 -2.54801 | opp_overlap 3199743 3199758 3199754, overlap 3199743 3199756 3199754 TCCAGCAGTAAGCGA GCTGGA TCT TCCAGC ATCTCTTTCACCGTC sucB 3200959 - 3199736 - | dihydrolipoamide acetyltransferase TERM 3496 3200657 - 3200688 + g 79 -2.3 -5.5074 | overlap 3200664 CAAGCTGGCGGTTTG GCGCTGAGCA-GGAG TTGA CTCCGTGCTTTG-GC TTTTTTCTTCGGTTG kgd 3203795 - 3200988 - | alpha-ketoglutarate decarboxylase TERM 3497 3203736 - 3203709 - G 77 -6.4 -4.58663 | gap 1, opp_overlap 3203709, overlap 3203711 AGGATCGGTTAAAAA GTC-TTCATAGAG CTG CTCTATGTAGGAC TGGTTCGCGCCCGCC TERM 3498 3203888 - 3203902 + r 70 -7.1 -3.75378 | AAACGGTTCACTCGA CGTGC TCAAT GCACG TTCTGTTATGGACCT TERM 3499 3203933 - 3203977 + r 71 -10.1 -2.64155 | opp_overlap 3203938 3203939 3203948, overlap 3203928 3203938 TAACGGTCCCGTTCA AGGAACCTCTAAAAACGGACA GCT TGCCGGTTTTTAGAGATTCCC TACCTTTAAGCAACC TERM 3500 3203972 - 3203938 - R 86 -11.6 -3.33696 | opp_overlap 3203938 3203933 3203928, overlap 3203939 3203948 GTCCCGTTCAAGGAA CCTCTAAAAACGGACA GCT TGCCGGTTTTTAGAGA TTCCCTACCTTTAAG TERM 3501 3203971 - 3203939 - R 91 -12.9 -2.60075 | opp_overlap 3203938 3203933 3203928, overlap 3203938 3203948 TCCCGTTCAAGGAAC CTCTAAAAACGGACA GCT TGCCGGTTTTTAGAG ATTCCCTACCTTTAA TERM 3502 3203991 - 3204012 + r 100 -13.7 -3.16683 | opp_overlap 3203991 CCTACCTTTAAGCAA CCCGGGGGA AACA TTCCCCGGG TTAATAAACTCACAT TERM 3503 3204012 - 3203991 - R 86 -11.5 -3.34895 | opp_overlap 3203991 CCTACCTTTAAGCAA CCCGGGGGA AACA TTCCCCGGG TTAATAAACTCACAT sdhB 3204806 - 3204090 - | succinate dehydrogenase iron-sulfur subunit TERM 3504 3204653 - 3204671 + g 80 -3 -5.48213 | opp_overlap 3204657, overlap 3204656 3204657 CACGGCATGAGCGGC GAAACGAC AAC GTCGGATC TTTTTCTTTTAACTG sdhA 3206626 - 3204860 - | succinate dehydrogenase flavoprotein subunit TERM 3505 3206025 - 3206007 - G 75 -10.2 -3.36515 | opp_overlap 3206020, overlap 3206005 3206010 GTTGATTGGTAAATA CGACCGGC ACC GCCGGTGG CCAACACGGTGGCCC TERM 3506 3206022 - 3206010 - G 71 -10.5 -2.84801 | opp_overlap 3206020, overlap 3206007 3206005 GATTGGTAAATACGA CCGGC ACC GCCGG TGGCCAACACGGTGG sdhD 3206974 - 3206627 - | succinate dehydrogenase cytochrome b556 small membrane subunit sdhC 3207357 - 3206968 - | succinate dehydrogenase cytochrome b556 large membrane subunit TERM 3507 3207171 - 3207157 - G 79 -2.1 -5.5074 | overlap 3207161 GAATTTAACAAAAAA GCTAT TCATG ACAGC CGCTGCTTGCATGAA gltA 3208007 - 3209287 + | type II citrate synthase TERM 3508 3209318 - 3209337 + T 100 -10.7 -5.31275 | opp_overlap 3209318 TGTTTAATCGAAAAA CGCCACC TTAACC GGTGGCG TTTTTTATAGTGGAA TERM 3509 3209337 - 3209318 - T 100 -10.7 -4.74103 | opp_overlap 3209318 TGTTTAATCGAAAAA CGCCACC TTAACC GGTGGCG TTTTTTATAGTGGAA pcp 3210000 - 3209353 - | pyrrolidone-carboxylate peptidase YE2951 3211028 - 3210009 - | hypothetical protein YE2952 3211756 - 3211025 - | hypothetical protein TERM 3510 3211810 - 3211826 + r 72 -7.9 -3.77111 | AACTTATGATGCATT CCACCCG GGC CAGGTGG TTATGGTTTTTACTG YE2953 3212584 - 3211847 - | hypothetical protein YE2954 3213531 - 3212581 - | hypothetical protein TERM 3511 3212967 - 3212957 - G 73 -8.2 -3.85698 | GCCTCGCGCCAGAAA GCGC CCT GCGC AACATCGTCAAATTC YE2955A 3214181 - 3213525 - | hypothetical protein YE2955 3215344 - 3214601 - | putative hydrolase-oxidase TERM 3512 3214809 - 3214793 - G 79 -9.5 -3.95022 | opp_overlap 3214793 TGCATCAACACCAAA TTCAGCA GCT TGCTGAA TATATCCTTGCCCAC YE2956 3216342 - 3215377 - | putative 3',5'-cyclic-nucleotide phosphodiesterase phr 3217893 - 3216448 - | deoxyribodipyrimidine photolyase TERM 3513 3217669 - 3217655 - G 73 -7.2 -4.1466 | ATCGAATCCTTAAAA TCATCA CAC TGATGA TAGTGCAGTGGGATC YE2958 3218382 - 3217897 - | hypothetical protein TERM 3514 3218408 - 3218433 + r 78 -9 -3.87149 | opp_overlap 3218409, overlap 3218409 ATCGACCAATAAAAA AGCCCATGAG CATTCA CTCATGGGCC TTTCACTTTACTGCA TERM 3515 3218432 - 3218409 - R 100 -13.2 -5.5112 | opp_overlap 3218408 3218409 TCGACCAATAAAAAA GCCCATGAGC ATTC ACTCATGGGC CTTTCACTTTACTGC TERM 3516 3218409 - 3218432 + r 93 -12.5 -2.91807 | opp_overlap 3218409, overlap 3218408 TCGACCAATAAAAAA GCCCATGAG CATTCA CTCATGGGC CTTTCACTTTACTGC ybfA 3218684 - 3218478 - | hypothetical protein TERM 3517 3218966 - 3218948 - H 70 -5.3 -4.56607 | gap 1 TTATCAATTAGAAAA CTGGGTGT ATTT AC-CCCAG AAATATCTACTCCGC TERM 3518 3219558 - 3219580 + G 74 -6.3 -4.42386 | gap 1 GGGATGTCGTGGCAT CTGG-CGCTG AATA CAGCGGTCAG TTTTGTGACTAACAC TERM 3519 3220802 - 3220791 - g 73 -7.2 -4.15044 | TTGGTGGCGAAGAAA CGCC AACC GGCG GGCAACGGCACCCTA kdpA 3219258 - 3220946 + | potassium-transporting ATPase subunit A kdpB 3221042 - 3223108 + | potassium-transporting ATPase subunit B TERM 3520 3223134 - 3223159 + F 71 -9.7 -2.58544 | gap 1, overlap 3223133 AACAATATTTTGCAA TGGCCACCG-CG CTT TGACGGTGGCCG GTTATAAGACTCAAA TERM 3521 3223420 - 3223434 + G 78 -5.7 -4.82901 | AATCGGCCAAAACTT TACCC AACTG GGGTA TTTTTCTGGACGCCC kdpC 3223244 - 3223846 + | potassium-transporting ATPase subunit C TERM 3522 3223929 - 3223939 + G 75 -3.2 -5.055 | opp_overlap 3223920 AAAAATCCCGTGGCC GGCT AAA AGTC TTTTTTGGGGCTTGC TERM 3523 3226265 - 3226228 - g 73 -5.5 -4.48741 | overlap 3226230 3226240 CAACTTATTAGAAAA TGCCCATAAATACGCCG GTTA CGACGCATTGCTGGGAA TTCGCGCCACAGTGC kdpD 3223856 - 3226555 + | sensor protein KdpD kdpE 3226714 - 3227241 + | two-component regulatory protein response regulator KdpE YE2965 3227334 - 3227762 + | hypothetical protein TERM 3524 3227842 - 3227852 + F 70 -2.6 -5.07567 | TATTTGGCTTCATTT TAAA TCA TTTA TTTTTTAAAATCTAA TERM 3525 3228994 - 3228975 - g 73 -3.7 -4.93296 | TGACGATGATAAAAA TAATCAT ACTGTA ATGATTA ATAATCTAGTGAGAA YE2966 3227908 - 3229359 + | putative hemolysin TERM 3526 3229363 - 3229377 + T 95 -5.6 -5.69379 | opp_overlap 3229363, overlap 3229365 GTAAAACATTAGCAA CCGCGA GTA TCGCCG TTTTTTTGCTTATAT TERM 3527 3229403 - 3229428 + T 86 -11.9 -3.14647 | opp_overlap 3229407, overlap 3229407 TATATGGGTATTGGC GAAATAGCGCC GGTT GGCGCTATTCC TTACCTGTAATGACT TERM 3528 3229424 - 3229407 - T 89 -11.3 -3.55444 | opp_overlap 3229403 3229407 TGGGTATTGGCGAAA TAGCGCC GGTT GGCGCTA TTCCTTACCTGTAAT TERM 3529 3229407 - 3229424 + T 86 -11.3 -3.3941 | opp_overlap 3229407, overlap 3229403 TGGGTATTGGCGAAA TAGCGCC GGTT GGCGCTA TTCCTTACCTGTAAT pgm 3231082 - 3229442 - | phosphoglucomutase TERM 3530 3230026 - 3230040 + g 81 -10 -4.07568 | CCCTATCAATCATCG CACTGG AAA CCAGTG TTTTACCCACCGCCA seqA 3231714 - 3231175 - | replication initiation regulator SeqA TERM 3531 3231462 - 3231451 - G 73 -7.2 -4.25347 | AAGCACCAACATAAA GCGG TTAA CCGC CCGATTTTGCTCAGC YE2969 3231928 - 3232722 + | hypothetical protein YE2970 3233066 - 3233353 + | LexA regulated protein YE2971 3235078 - 3233420 - | putative methyl-accepting chemotaxis protein TERM 3532 3233571 - 3233599 + g 73 -10.1 -3.25823 | overlap 3233572 AACTGAGTCGCTTGT TCCTCTAGCGCGG CAG CCGCGCGTGAGGC TTGCTGTACCAACGC TERM 3533 3233572 - 3233598 + g 84 -13.6 -2.55351 | overlap 3233571 ACTGAGTCGCTTGTT CCTCTAGCGCGG CAG CCGCGCGTGAGG CTTGCTGTACCAACG TERM 3534 3234051 - 3234061 + g 73 -2.4 -5.03715 | ACCACATCAGCTACC AGCG CCC CGCC TTTTTTGGCGGTAAT fldA 3235301 - 3235828 + | flavodoxin FldA TERM 3535 3235839 - 3235880 + F 76 -9.5 -3.50332 | gap 1, overlap 3235867 GTTAATTTGTCATGT CGGAAACGCGGGGATGAAAT TTA ATATTG-CCACGCGTTTCCG TTGCTTCTATCCCTC fur 3236197 - 3236643 + | ferric uptake regulator TERM 3536 3236948 - 3236932 - T 100 -7.2 -6.02546 | TTAAAGCAAAAAAAA CCCCAG ACTTG CCGGGG GAAAACCATCAACTC chb 3239715 - 3237040 - | chitobiase precursor TERM 3537 3237132 - 3237150 + g 73 -7.4 -4.17762 | CTTTCGGTTGTGCTT TGGCATCA TAC TGCTGCCA TTGTTTTCCGCCATC TERM 3538 3238030 - 3238045 + g 70 -2.4 -4.91109 | overlap 3238031 AATAATGCCTTTACC CGGCTC AATC GGGCCA TTTTTGTCCTGGAAG YE2975 3240134 - 3239808 - | putative lipoprotein TERM 3539 3239907 - 3239920 + g 73 -5.3 -4.57482 | opp_overlap 3239895 ACAGCGCTGGTAATC CAGTA CCCG TACTG TTTCTTTGTCGGTAA ybfM 3241598 - 3240195 - | hypothetical protein TERM 3540 3242207 - 3242188 - R 100 -10.7 -5.38047 | TATGGACATAAAAAA GGCGTGG ACTAAG CCACGCC AATTGAGGTAGATCG glnS 3243901 - 3242234 - | glutaminyl-tRNA synthetase TERM 3541 3244025 - 3244002 - R 100 -15.4 -6.17669 | opp_overlap 3244002 AATAAAACAAAAAAA CGGGAAGAGA TTGC TCTCTTCCCG TTGGTTCAGCTAAAA TERM 3542 3244002 - 3244025 + r 100 -15.4 -3.35813 | opp_overlap 3244002 AATAAAACAAAAAAA CGGGAAGAGA TTGC TCTCTTCCCG TTGGTTCAGCTAAAA nagE 3246128 - 3244095 - | pts system, N-acetylglucosamine-specific IIABC component TERM 3543 3246414 - 3246400 - H 74 -6.4 -4.50686 | CGAAAAATGAACAAA GCATTG TAC CAACGC ATGAGTCAAAATCTG nagB 3246499 - 3247299 + | glucosamine-6-phosphate deaminase TERM 3544 3247469 - 3247479 + G 73 -4.6 -4.78753 | overlap 3247459 TTGGGTGGCGCCATC CTGG CCC CCGG TTTTATTGATGTTCA TERM 3545 3247691 - 3247681 - g 79 -2.4 -5.42862 | opp_overlap 3247681 ATATCTGCAAAAAAA CCAG CAT CAGG CTTTGGGTCTGCATC nagA 3247319 - 3248464 + | N-acetylglucosamine-6-phosphate deacetylase nagC 3248478 - 3249701 + | putative N-acetylglucosamine regulatory protein nagD 3249912 - 3250664 + | UMP phosphatase TERM 3546 3250720 - 3250730 + F 71 -2.4 -5.14563 | overlap 3250719 GATACTCCCCTTATC GCGC GAC GCCC TTTTTTAGTGCAGCG asnB 3251009 - 3252673 + | asparagine synthetase B TERM 3547 3252722 - 3252745 + T 100 -8.8 -5.52384 | overlap 3252725 CAACCATTCAGCTCT CAAGGCCGCC TTTG GGTGGCCTTA TTTTTTTGCTGGCAA TERM 3548 3252725 - 3252742 + T 100 -10.5 -4.8487 | overlap 3252722 CCATTCAGCTCTCAA GGCCGCC TTTG GGTGGCC TTATTTTTTTGCTGG TERM 3549 3253190 - 3253152 - T 79 -11.7 -2.53911 | opp_overlap 3253143 3253155 CCAAGCGGTAAGGCA CCAGGTTTTGATCCTGG CATTC CCAGGTTCGAATCCTGG TATCCCAGCCATTTC TERM 3550 3253388 - 3253350 - T 79 -11.7 -2.53911 | opp_overlap 3253353 CCAAGCGGTAAGGCA CCAGGTTTTGATCCTGG CATTC CCAGGTTCGAATCCTGG TATCCCAGCCATACA TERM 3551 3253614 - 3253599 - T 73 -6 -4.51196 | opp_overlap 3253599, overlap 3253594 GCCAAATTTAGAAAA GCTCGC TTCG GCGGGC TTTTTGCTTTTCTGC TERM 3552 3253599 - 3253614 + T 100 -8.2 -5.1417 | opp_overlap 3253599 3253594 GCCAAATTTAGAAAA GCTCGC TTCG GCGGGC TTTTTGCTTTTCTGC ubiF 3254941 - 3253760 - | 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase TERM 3553 3255146 - 3255118 - H 72 -9.5 -3.09834 | opp_overlap 3255127 3255127 3255128 3255130, overlap 3255120 TATTCGATGACGGAA CACTGCATAGCGC ATT GCGCCACGCGATG TGACTTTTATGATGA TERM 3554 3255127 - 3255150 + H 73 -6 -4.49344 | gap 1, opp_overlap 3255120 3255118, overlap 3255127 3255128 3255130 ACGGAACACTGCATA G-CGCATTGCG CCA CGCGATGTGAC TTTTATGATGAATTT TERM 3555 3255128 - 3255148 + H 70 -9.7 -2.5639 | opp_overlap 3255120 3255118, overlap 3255127 3255127 3255130 CGGAACACTGCATAG CGCATTGCG CCA CGCGATGTG ACTTTTATGATGAAT miaB 3255184 - 3256608 + | putative tRNA-thiotransferase TERM 3556 3256638 - 3256661 + F 100 -10.3 -5.07652 | opp_overlap 3256627, overlap 3256631 3256637 3256636 ACCAGTCCGCACCAG CAGGCGCTG CATTGT CAGTGCCTG TTTTATTTTAGCGGG YE2986 3256887 - 3257978 + | hypothetical protein YE2987 3257975 - 3258448 + | putative metalloprotease TERM 3557 3258526 - 3258492 - f 71 -4.3 -4.77036 | gap 1, overlap 3258493 3258494 GGGTATCAGTAAAAA GCTGTCGGCAGTGTGT GTTT AC-CACTGCCGATAAA ATATAATCTTACATG ybeX 3258563 - 3259441 + | hypothetical protein TERM 3558 3259473 - 3259499 + G 78 -11.6 -3.07655 | overlap 3259484 3259486 GCTTCATACCTTCAA CGCCAGTGGG TTCGCGC CCTACTGGCG CTATTTTTTGGCGCC TERM 3559 3259484 - 3259502 + G 85 -5.9 -5.02074 | overlap 3259473 3259486 TCAACGCCAGTGGGT TCGCGCC CTACT GGCGCTA TTTTTTGGCGCCTGC TERM 3560 3259486 - 3259500 + G 77 -8.5 -4.13963 | overlap 3259473 3259484 AACGCCAGTGGGTTC GCGCC CTACT GGCGC TATTTTTTGGCGCCT lnt 3259449 - 3261026 + | apolipoprotein N-acyltransferase YE2990 3261035 - 3261619 + | hypothetical protein TERM 3561 3261713 - 3261733 + F 74 -7.6 -3.99062 | CCGAATGATATTTCA TAGCTCTG ATAAA CAGGGCTA TTTATCCTCCCTGTT TERM 3562 3261845 - 3261835 - f 73 -8.2 -3.58037 | TATTAAGTGTTCAAA GGGC ATA GCCC CGCTGTATAGATGAG TERM 3563 3262337 - 3262323 - g 71 -7.2 -4.01135 | overlap 3262328 CTGAAGAAGATCAAA GATAAC GGC GTTATC GTCGTCGGTCACCGT glnH 3262206 - 3263120 + | glutamate and aspartate transporter subunit TERM 3564 3263154 - 3263130 - f 79 -8.5 -4.12474 | overlap 3263133 AACTAACAATAATAA TCAGGGCCAGC TCT GCTAGCCCTAC AGATTGATGATGGAC TERM 3565 3263151 - 3263133 - f 93 -12.4 -3.07102 | overlap 3263130 TAACAATAATAATCA GGGCCAGC TCT GCTAGCCC TACAGATTGATGATG TERM 3566 3263186 - 3263212 + F 100 -11.6 -5.7946 | opp_overlap 3263183 3263186 GATTGGTAGACAGGA TGCGGGGTGG CCGTTCC CCACTCCGCA TTTTTTTGTTCACCC TERM 3567 3263885 - 3263843 - g 74 -2.7 -5.03145 | gap 1, overlap 3263845 CAACCTGGTAAAAAA CTCAGCCAT-TGCATCAACC ATCG GGCTGGTAGATATGGCTGCG CAGGCGGGTAAATTG gltJ 3263298 - 3264038 + | putative glutamate/aspartate transport system permease gltK 3264038 - 3264712 + | putative glutamate/aspartate transport system permease gltL 3264709 - 3265437 + | putative glutamate/aspartate transport ATP-binding protein YE2995 3265975 - 3265493 - | hypothetical protein TERM 3568 3266239 - 3266224 - H 74 -4.6 -4.83615 | CACTGCGCAGAAAAA GCCTCC AGTA GGATGC TGAGTGTTGTTGCCG TERM 3569 3267268 - 3267257 - g 76 -2.2 -5.28778 | opp_overlap 3267262 ACTATGGAGAAAAAA GGCA TGGC TACC GGCCTGTATGCCATC leuS 3266354 - 3268936 + | leucyl-tRNA synthetase TERM 3570 3269290 - 3269316 + G 73 -10.3 -3.11619 | opp_overlap 3269294, overlap 3269305 TTGATTCCAGGTCAT GATATTTACCC AATTC GGGTGAATATC TTCCGTACCTTCTTC rlpB 3268951 - 3269574 + | LPS-assembly lipoprotein RplB TERM 3571 3269599 - 3269626 + G 100 -14.8 -3.98649 | opp_overlap 3269595, overlap 3269600 ATCCTGAACAACTTG TCGCGCAGCTCC ATGA GGGGCTGCGCGC TTGTTATCTGTTGTG TERM 3572 3269600 - 3269625 + G 100 -18.3 -2.98105 | opp_overlap 3269595, overlap 3269599 TCCTGAACAACTTGT CGCGCAGCTCC ATGA GGGGCTGCGCG CTTGTTATCTGTTGT holA 3269571 - 3270605 + | DNA polymerase III subunit delta nadD 3270595 - 3271257 + | nicotinic acid mononucleotide adenylyltransferase TERM 3573 3271692 - 3271706 + G 70 -10 -3.09834 | ACCGGTACCTCCACT CGCCAT GTG ATGGCG TTGGCTGATAACCTG YE3000 3271557 - 3271874 + | hypothetical protein YE3001 3271878 - 3272348 + | SPOUT methyltransferase superfamily protein TERM 3574 3272458 - 3272470 + G 78 -9.1 -4.06687 | TTTTCGCGACTATTC GGCTG AGT CAGCC TTGTTTGTCCGCCGT TERM 3575 3272506 - 3272527 + G 70 -9.5 -3.14344 | TGTGGCTTTCCTCGG TATCCTGCT GCTA AGCGGGATA TTGGTCGCAAACATG TERM 3576 3272733 - 3272709 - g 75 -3.5 -5.02074 | TGATGCCGGAAAAAA TTGAAGACCTC CCC GCGACCCTCAA TGCACTGCGCCCGAT TERM 3577 3272802 - 3272789 - g 81 -8.1 -4.62471 | overlap 3272792 GCCAACTTTGAAAAA GAGCG TAAG CGCTC ACGTCGCTTTACTTC TERM 3578 3273498 - 3273472 - g 100 -9.4 -4.77438 | AGTTATCACCAAAAA CACCAGCCTG TTTGATC CCGGCTGGTG GCAGTTGCCCGGTTC TERM 3579 3273762 - 3273749 - g 91 -6.7 -5.28826 | overlap 3273751 3273761 AAACGCCATAAAAAA CCTTG GTAT CAAGG GGATACCATCCCCGT TERM 3580 3273775 - 3273761 - g 70 -10 -3.1506 | overlap 3273749 3273751 AAACCTTGGTATCAA GGGGAT ACC ATCCCC GTAGGTATCGGTCAG TERM 3581 3274301 - 3274277 - g 76 -11.4 -2.80096 | AACAACACTGAATTA CCGGATGCAG CTCCT CTGCCTCCGG GCGTTGAAGCAGACT mrdA 3272423 - 3274318 + | penicillin-binding protein 2 mrdB 3274355 - 3275467 + | cell wall shape-determining protein rlpA 3275477 - 3276574 + | rare lipoprotein A TERM 3582 3276654 - 3276617 - f 100 -8.5 -5.38326 | opp_overlap 3276620, overlap 3276620 CTAACCAAACAAAAA TAACCGTAACTCCCTGT GCTA ACAGAATGTTACGGTTG AATGCATAAGCGCCA TERM 3583 3276651 - 3276620 - f 100 -10.2 -4.74052 | opp_overlap 3276620, overlap 3276617 ACCAAACAAAAATAA CCGTAACTCCCTGT GCTA ACAGAATGTTACGG TTGAATGCATAAGCG dacA 3276788 - 3277999 + | D-alanyl-D-alanine carboxypeptidase fraction A TERM 3584 3278046 - 3278075 + F 78 -7.1 -4.46926 | opp_overlap 3278045 3278052, overlap 3278052 CATATTATAAATAAT GTGAAACTCCCGC TCCG GCGGGAGTTATAA TTTTATAGTCGGGTA TERM 3585 3278069 - 3278052 - f 100 -12.7 -3.74841 | opp_overlap 3278046 3278052, overlap 3278045 ATAAATAATGTGAAA CTCCCGC TCCG GCGGGAG TTATAATTTTATAGT TERM 3586 3278052 - 3278069 + F 100 -12.7 -3.73008 | opp_overlap 3278052 3278045, overlap 3278046 ATAAATAATGTGAAA CTCCCGC TCCG GCGGGAG TTATAATTTTATAGT YE3006 3278148 - 3278411 + | hypothetical protein TERM 3587 3278438 - 3278473 + F 79 -3.4 -5.40072 | gap 2, overlap 3278441 TACTGACCACCCACC TATGGCCC-ACA-CTG CTTACT CAGCTGTCGGGCCTTA TTTTTTTACGGCCAA TERM 3588 3278441 - 3278470 + F 75 -5.1 -4.79949 | gap 2, overlap 3278438 TGACCACCCACCTAT GGCCC-ACA-CTG CTTACT CAGCTGTCGGGCC TTATTTTTTTACGGC lipB 3278566 - 3279279 + | lipoyltransferase TERM 3589 3279441 - 3279429 - f 80 -6.3 -4.90013 | GAATTTAATTAAAAA TCTCA AAT TGAGA GATTCAGAACTGGAA lip 3279468 - 3280433 + | lipoyl synthase TERM 3590 3280474 - 3280431 - T 82 -7.7 -4.42238 | opp_overlap 3280440 3280472, overlap 3280434 3280435 3280436 GGATTGGAAGTAAAA TAAGCCAAATTAGTCTGAA TAGTTG TTCAGACTAATTTGATTGA AATATTTTATTACAT TERM 3591 3280471 - 3280434 - T 88 -9.4 -4.32402 | opp_overlap 3280440, overlap 3280431 3280435 3280436 TTGGAAGTAAAATAA GCCAAATTAGTCTGAA TAGTTG TTCAGACTAATTTGAT TGAAATATTTTATTA TERM 3592 3280470 - 3280435 - T 95 -12.9 -3.18718 | opp_overlap 3280440, overlap 3280434 3280431 3280436 TGGAAGTAAAATAAG CCAAATTAGTCTGAA TAGTTG TTCAGACTAATTTGA TTGAAATATTTTATT TERM 3593 3280469 - 3280436 - T 93 -14.2 -2.50508 | opp_overlap 3280440, overlap 3280435 3280434 3280431 GGAAGTAAAATAAGC CAAATTAGTCTGAA TAGTTG TTCAGACTAATTTG ATTGAAATATTTTAT TERM 3594 3280440 - 3280465 + T 86 -9.9 -3.93026 | opp_overlap 3280436 3280435 3280434 3280431 GTAAAATAAGCCAAA TTAGTCTGAAT AGTT GTTCAGACTAA TTTGATTGAAATATT TERM 3595 3280533 - 3280513 - T 100 -9.7 -4.96646 | opp_overlap 3280513 GCAGATAATCAAAAA CGGATTTCC ACT GGAGATCCG TTTTTTAGTTTCGCA TERM 3596 3280513 - 3280533 + T 100 -11.9 -5.37593 | opp_overlap 3280513 GCAGATAATCAAAAA CGGATTTCC ACT GGAGATCCG TTTTTTAGTTTCGCA tatE 3280791 - 3280576 - | twin argininte translocase protein A adrA 3280995 - 3282047 + | diguanylate cyclase/phosphodiesterase domain-containing protein crcB 3282095 - 3282478 + | hypothetical protein TERM 3597 3282757 - 3282734 - T 100 -11 -5.72622 | opp_overlap 3282734 GCTATAAATAAAAAA CCCGCCTGAT AACA ATGAGGCGGG TTTTAAGAGATATGG TERM 3598 3282734 - 3282757 + T 93 -11 -4.10657 | opp_overlap 3282734 GCTATAAATAAAAAA CCCGCCTGAT AACA ATGAGGCGGG TTTTAAGAGATATGG cspE 3282987 - 3282778 - | cold shock protein CspE YE3013 3283362 - 3283733 + | hypothetical protein TERM 3599 3283799 - 3283776 - T 100 -15.4 -3.88787 | CGATATCCCCATAAA CAGCCCCAAA TAGC TTTGGGGCTG TCCGGGCATTCCAGG YE3014 3284530 - 3283919 - | LuxR family regulatory protein TERM 3600 3283959 - 3283969 + g 73 -2.4 -5.14563 | AATTCAACGTCAGTA CGGG CTC CCAG TTTTTTCATAGCAGA YE3015 3284883 - 3285848 + | hypothetical protein YE3016 3286643 - 3285999 - | serine/threonine protein phosphatase TERM 3601 3286741 - 3286766 + r 84 -3.9 -5.5112 | overlap 3286742 AAAAATAGAGGGGGA ATGTGGTGAGT TTCA ACACACCGCAA TTTTTTGTTGATAGA TERM 3602 3286742 - 3286765 + r 70 -7.4 -3.89587 | overlap 3286741 AAAATAGAGGGGGAA TGTGGTGAGT TTCA ACACACCGCA ATTTTTTGTTGATAG TERM 3603 3286864 - 3286833 - R 100 -16.8 -4.62336 | opp_overlap 3286835 3286838 3286841, overlap 3286809 ATGCTATTTCAAAAA TAGAATAAGCCGCC CTCA AGCGGCTTATTCTA CGTTGAAAGGACAAC TERM 3604 3286835 - 3286862 + r 93 -14.3 -2.52464 | opp_overlap 3286833, overlap 3286838 3286841 GCTATTTCAAAAATA GAATAAGCCGC CCTCAA GCGGCTTATTC TACGTTGAAAGGACA TERM 3605 3286838 - 3286859 + r 80 -10.2 -3.41878 | opp_overlap 3286833, overlap 3286835 3286841 ATTTCAAAAATAGAA TAAGCCGC CCTCAA GCGGCTTA TTCTACGTTGAAAGG TERM 3606 3286841 - 3286856 + r 70 -7.5 -3.84808 | opp_overlap 3286833, overlap 3286838 3286835 TCAAAAATAGAATAA GCCGC CCTCAA GCGGC TTATTCTACGTTGAA YE3017 3287088 - 3286894 - | hypothetical protein TERM 3607 3287486 - 3287476 - g 73 -5.4 -4.63172 | opp_overlap 3287476 TATCAAACCAGAAAA CATC AGT GATG TTATGCCGCTCTATA YE3018 3287435 - 3287722 + | hypothetical protein YE3019 3289512 - 3287740 - | putative ABC transport protein TERM 3608 3289306 - 3289339 + g 71 -6.8 -4.21462 | opp_overlap 3289308 3289312 3289325 GACCCCATAAGCAAT TATCAAGGTGATGG GAATAG CCATCATCTTGGCA TTTTCACTGCTCAAT TERM 3609 3290016 - 3289981 - R 100 -7.6 -5.54079 | opp_overlap 3289987, overlap 3289982 3289985 3289987 CGAAAAACTAAAAAA CCAACAGCCCCACTGA ATAT TGAGTGGGGCTTTTAA TCATCATCAATACTA TERM 3610 3290015 - 3289982 - R 78 -8.9 -3.90007 | opp_overlap 3289987, overlap 3289981 3289985 3289987 GAAAAACTAAAAAAC CAACAGCCCCACTGA ATAT TGAGTGGGGCTTTTA ATCATCATCAATACT TERM 3611 3290012 - 3289985 - R 77 -8.4 -4.00212 | opp_overlap 3289987, overlap 3289982 3289981 3289987 AAACTAAAAAACCAA CAGCCCCACTGA ATAT TGAGTGGGGCTT TTAATCATCATCAAT TERM 3612 3290010 - 3289987 - R 83 -11 -3.55478 | opp_overlap 3289987, overlap 3289985 3289982 3289981 ACTAAAAAACCAACA GCCCCACTGA ATAT TGAGTGGGGC TTTTAATCATCATCA TERM 3613 3289987 - 3290010 + r 100 -11 -4.32034 | opp_overlap 3289987 3289985 3289982 3289981 ACTAAAAAACCAACA GCCCCACTGA ATAT TGAGTGGGGC TTTTAATCATCATCA YE3020 3291504 - 3290029 - | putative lyase TERM 3614 3290065 - 3290076 + g 72 -5.8 -4.4009 | AGATACCCAATTCTT CAGC ACTC GCTG TTTTATCGCCTCGGG YE3021 3293129 - 3291534 - | putative phenylalanine and histidine ammonia-lyase TERM 3615 3293329 - 3293309 - R 82 -4.7 -5.28826 | opp_overlap 3293309 AAATGTCAGAAAAAA GGAATGTTT ACT AAGCATCCC TATGATATATCTATA TERM 3616 3293574 - 3293529 - R 95 -12.9 -3.19789 | gap 1, opp_overlap 3293529 3293531 ATATTTAATACCTAA CAGCGGCTTTCGAGTTGTAT CATCTAT ATA-AATTCGAAAGCCGCTG TTAACTGCATAATTA TERM 3617 3293529 - 3293574 + r 100 -15.8 -3.0894 | gap 1, opp_overlap 3293529, overlap 3293531 ATATTTAATACCTAA CAGCGGCTTTCGAG-TTGTAT CATCT ATATAAATTCGAAAGCCGCTG TTAACTGCATAATTA TERM 3618 3293531 - 3293572 + r 93 -12.6 -3.10056 | gap 1, opp_overlap 3293529, overlap 3293529 ATTTAATACCTAACA GCGGCTTTCGAG-TTGTAT CATCT ATATAAATTCGAAAGCCGC TGTTAACTGCATAAT YE3022 3294708 - 3293587 - | hypothetical protein YE3023 3296053 - 3295097 - | hypothetical protein copR 3296382 - 3297071 + | transcriptional activator YE3025 3297087 - 3298562 + | putative two-component system sensor protein YE3026 3298631 - 3298987 + | hypothetical protein YE3027 3299086 - 3299850 + | exported protein TERM 3619 3301052 - 3301021 - f 89 -7.4 -5.055 | opp_overlap 3301021 GTAACGTCCAAAAAA GCAGGATACATT TGCTAATT AATGAATCCTGC TCATTAAGCCTATCG TERM 3620 3301780 - 3301806 + G 71 -9.4 -3.51924 | GCGTGGGACAGGTTG TCTTGCGCTGGA TCT TCCAGCGCGGCA TTGTCTCACTGGCAA YE3031 3301140 - 3301991 + | putative aldo/keto reductase TERM 3621 3302028 - 3302058 + T 100 -11.9 -4.63486 | opp_overlap 3302030, overlap 3302030 AATGTCTTAAATCAC AATCAGCGACGCC AGTAA GGTGTCGCTGATG TTTTATTCAGAAGCT TERM 3622 3302056 - 3302030 - T 100 -12.3 -3.60151 | opp_overlap 3302028 3302030 TGTCTTAAATCACAA TCAGCGACGCC AGTAA GGTGTCGCTGA TGTTTTATTCAGAAG TERM 3623 3302030 - 3302056 + T 100 -14.5 -3.93367 | opp_overlap 3302030, overlap 3302028 TGTCTTAAATCACAA TCAGCGACGCC AGTAA GGTGTCGCTGA TGTTTTATTCAGAAG TERM 3624 3302065 - 3302075 + T 87 -5.4 -5.45652 | TCGCTGATGTTTTAT TCAG AAG CTGA TTTTTTATTCAGAAT YE3032 3302477 - 3302151 - | hypothetical protein YE3033 3302712 - 3303623 + | LysR family transcriptional regulator YE3034 3304741 - 3303626 - | NADH:flavin oxidoreductase / NADH oxidase family protein YE3035 3305377 - 3305715 + | hypothetical protein TERM 3625 3305778 - 3305737 - g 88 -13.9 -2.91702 | opp_overlap 3305742, overlap 3305742 AACACGATAAAATAT TAAAATGGCCGGAAGTTAA TGAT TTAGCTCCCGGCCATTTTT TATGGCTGCCTGAAT TERM 3626 3305742 - 3305773 + G 100 -13.8 -5.28176 | opp_overlap 3305737 3305742 GATAAAATATTAAAA TGGCCGGAAGTTAA TGAT TTAGCTCCCGGCCA TTTTTTATGGCTGCC TERM 3627 3305773 - 3305742 - g 100 -13.8 -4.58236 | opp_overlap 3305742, overlap 3305737 GATAAAATATTAAAA TGGCCGGAAGTTAA TGAT TTAGCTCCCGGCCA TTTTTTATGGCTGCC YE3036 3305700 - 3306347 + | hypothetical protein TERM 3628 3306364 - 3306387 + F 71 -6.8 -4.23674 | gap 1, opp_overlap 3306364, overlap 3306382 TCCCCCGATTTAATA CGCCTGA-TTA CGC TAACTCGGGCG TTTCTATTACTCAAA TERM 3629 3306831 - 3306817 - f 75 -5.6 -4.66002 | overlap 3306819 TACTAATAAAAATAA TCCGCC GCC GTCGGA GAGCTTATAAGGTTT YE3039 3307405 - 3308364 + | hypothetical protein TERM 3630 3308511 - 3308475 - f 100 -9.6 -4.73864 | gap 1, opp_overlap 3308488 CCAACCAATATAAAA TCGCCACTAACGACAGG ATAA CTTGT-ATTAGTGGCGA GAATAAGAATCGAAT YE3040 3308773 - 3309072 + | transposase for insertion element IS3 YE3041 3309069 - 3309461 + | transposase for insertion element IS3 YE3042 3310058 - 3309489 - | hypothetical protein TERM 3631 3309647 - 3309659 + g 74 -6.3 -4.45738 | TGAGTTGTTCCATAC TCAGT GGT ACTGA TTTATTATTCACATC TERM 3632 3309914 - 3309934 + g 79 -9.7 -3.91858 | overlap 3309929 3309932 CCCCTTGTATCAGTG CCTGCCAAA TGA TTTGGCCGG TTTCTGCCGTGTCTA TERM 3633 3310352 - 3310338 - H 71 -8.6 -3.56837 | overlap 3310330 CCGCAAAGATGAGAA CACCAA CAT TTGGTG AACCCCACGCGTTAC tnpA 3310600 - 3310932 + | IS1329 transposase A TERM 3634 3310971 - 3310995 + F 72 -7.8 -3.80133 | overlap 3310985 ATCCAACAGGTATGC CGCTGCTTGT CGCTC ACGCGCAGCG TGTTTTATGCCCGTA TERM 3635 3310985 - 3310997 + F 86 -9.1 -4.3898 | overlap 3310971 CCGCTGCTTGTCGCT CACGC GCA GCGTG TTTTATGCCCGTAGT TERM 3636 3311423 - 3311400 - g 85 -10.3 -4.03234 | GCCTTCTCAGACAAA CCGGACAGC GACTTG ACTGTCCGG GCCTTAAGGCTGGCC TERM 3637 3311468 - 3311448 - g 83 -8.9 -4.41348 | opp_overlap 3311450 3311455, overlap 3311450 CTGGCCGTAAATAAA CGCCGACCC ACA GGGTCAGTG GTGTTCCATAGCGAT TERM 3638 3311667 - 3311687 + G 71 -4.7 -4.50976 | CAGGGTATCGCTGAT GTTATCGAT TAT ATCGACAGC TTTTATAATCTGAAA tnpB 3311022 - 3311771 + | transposase B ads 3312100 - 3312981 + | bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase YE3046 3312981 - 3313193 + | hypothetical protein TERM 3639 3313278 - 3313308 + T 100 -6.2 -5.6473 | gap 1, opp_overlap 3313279, overlap 3313279 GATATGGGCAAAAAA ATGCGGTTGCTGG CGAACA CCAG-AACCGCAG TTTTTTTAATCTTCT TERM 3640 3313307 - 3313279 - T 100 -10.4 -5.42862 | gap 1, opp_overlap 3313278 3313279 ATATGGGCAAAAAAA TGCGGTTGCTGGC GAAC ACCAG-AACCGCA GTTTTTTTAATCTTC TERM 3641 3313279 - 3313307 + T 86 -9.7 -3.96398 | gap 1, opp_overlap 3313279, overlap 3313278 ATATGGGCAAAAAAA TGCGGTTGCTGG CGAACA CCAG-AACCGCA GTTTTTTTAATCTTC cysS 3314783 - 3313398 - | cysteinyl-tRNA synthetase TERM 3642 3315239 - 3315229 - g 73 -5.4 -4.58283 | CAACGGTTTGAAAAA TACC CGT GGTA CTCTGGCAATGGCGC TERM 3643 3315438 - 3315409 - g 73 -2.1 -5.1417 | gap 1, opp_overlap 3315388, overlap 3315410 TGATAAAATCAAAAA CGTTGC-TACCGGT CGC AGCGGTATGCATCA AGATGTGCCAAAAGA ppiB 3314996 - 3315490 + | peptidyl-prolyl cis-trans isomerase B (rotamase B) TERM 3644 3315562 - 3315546 - g 73 -10.1 -3.14931 | opp_overlap 3315540 3315546 CTTAGCGTTCAGGAA CCGGCAA TCA CTGCCGG TTTTCTGCATTTTAT TERM 3645 3315546 - 3315562 + G 90 -9.4 -4.5538 | opp_overlap 3315546, overlap 3315540 CTTAGCGTTCAGGAA CCGGCA ATCAC TGCCGG TTTTCTGCATTTTAT TERM 3646 3315866 - 3315880 + G 76 -8.6 -4.11394 | CCTGTGTACTGATGA TGCTGA CTA TCAGCA TTTTCGCCGTCGAGT YE3050 3315501 - 3316223 + | UDP-2,3-diacylglucosamine hydrolase TERM 3647 3316585 - 3316565 - g 73 -8.3 -3.87869 | opp_overlap 3316557, overlap 3316566 CGAACCCCTGACAAA CTGTTCAGC TTT GCCGAACAA GCCGATGCTAATGGC purE 3316400 - 3316924 + | phosphoribosylaminoimidazole carboxylase catalytic subunit PurE TERM 3648 3317970 - 3317955 - g 76 -7.5 -4.43012 | overlap 3317956 3317957 AGCGGAATACCAAAA CGCCC TGCGCT GGGCG CAAGCTAAGCTATAA purK 3316921 - 3317985 + | phosphoribosylaminoimidazole carboxylase ATPase subunit TERM 3649 3318025 - 3318006 - T 100 -12.2 -4.1851 | opp_overlap 3318010 TCAAAGCATAAATAA GTCACGGT ACTA ACCGTGAC TTGAGACTACTGACA ybbP 3320565 - 3318139 - | putative permease TERM 3650 3319998 - 3320015 + g 77 -4.1 -5.03314 | gap 1, overlap 3319987 AGCTCAAACGGCTAC CCGGTTGT ATT GCA-CCGG TTTTTTCCACGTCAG ybbA 3321248 - 3320562 - | putative ABC transporter ATP-binding protein YbbA apeA 3321216 - 3321854 + | multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1 TERM 3651 3321924 - 3321910 - g 73 -2.1 -5.10497 | overlap 3321922 AAGTTATGCAAAAAA CAGTA TTAAT TACCG GTTGCTCCAGCGGCA ybbO 3321900 - 3322676 + | short chain dehydrogenase ybbN 3322748 - 3323617 + | putative thioredoxin TERM 3652 3323669 - 3323691 + F 100 -11.9 -4.77165 | overlap 3323671 TACCATTATTTGCTG CTGCGCGGG GCCAA CCCGCGCTG TTTTATTCTGCCCCC TERM 3653 3323671 - 3323689 + F 100 -13.1 -4.00512 | overlap 3323669 CCATTATTTGCTGCT GCGCGGG GCCAA CCCGCGC TGTTTTATTCTGCCC TERM 3654 3324039 - 3324070 + G 73 -10.2 -3.10761 | gap 1, opp_overlap 3324048, overlap 3324047 CCAAGAAATCATTTC CCGCGACAA-TGCCA ATG TGGCAATTGATGCGG TCTGCTTTATTCAGG TERM 3655 3324217 - 3324197 - g 71 -8.3 -3.76492 | TGGAACTGGATGAAA TGTTGTCCC AAC GCGACAACA TCAACAGCCGCCTGC YE3058 3323815 - 3324729 + | hypothetical protein ybbJ 3324732 - 3325181 + | hypothetical protein TERM 3656 3325214 - 3325193 - T 70 -5.9 -4.28375 | opp_overlap 3325193 CTAACACATTGAAAA GGCGTAT TTATTTTG ATACGCC TTTCACATAACATTA cueR 3325646 - 3325227 - | putative regulatory protein TERM 3657 3325606 - 3325618 + g 100 -5.5 -5.75945 | AAACGAATGGCCTTA CTGGT TAA ACCGG TTTTTTTTGCGACAT TERM 3658 3325925 - 3325910 - g 71 -4.6 -4.64657 | CCAAACGCGTAAAAA CGGCAT TAGA AAGCCG TGAAGATGTTCATCA TERM 3659 3326278 - 3326258 - g 71 -4.7 -4.62471 | CGCAATCCCCAAAAA CTGAGCC GCTGACT GACTCAG CCCCATCTTCGCCGG TERM 3660 3326790 - 3326801 + G 81 -5.8 -4.93296 | GCTGGTGATGATATT TGCC GGTG GGCA TTTTTATCGTAATGC TERM 3661 3326848 - 3326835 - g 74 -3.1 -5.0538 | overlap 3326836 3326837 GGTCAGCCTAAAAAA TGGTA GTGC CACCA TGGATACCCTGGTAG ybaR 3325843 - 3328599 + | copper exporting ATPase TERM 3662 3328639 - 3328603 - f 100 -12.3 -5.38549 | opp_overlap 3328602 3328601 CCTAAACAATAAAAA CTCGGTGGCGCACAACA CTT TCTTGCGCGCCACTAAG CGTTTAGGATACAGA YE3062 3328681 - 3329490 + | hypothetical protein TERM 3663 3329528 - 3329507 - f 100 -11.7 -5.52909 | GAATACGCAAAAAAA TAGCCGATA TCGC TATCGGCTA GTCAAAGAGGAATTT YE3063 3329766 - 3330245 + | hypothetical protein TERM 3664 3330285 - 3330257 - f 100 -13.3 -3.2327 | opp_overlap 3330264, overlap 3330259 3330264 TTAAGTTATCACCAA TATGAAAGGGCTA AAA TAGCCCTTTCATC GATAATTAACTTATT TERM 3665 3330283 - 3330259 - f 100 -15.9 -3.17794 | opp_overlap 3330264, overlap 3330257 3330264 AAGTTATCACCAATA TGAAAGGGCTA AAA TAGCCCTTTCA TCGATAATTAACTTA TERM 3666 3330278 - 3330264 - f 86 -10 -3.95424 | opp_overlap 3330264, overlap 3330259 3330257 ATCACCAATATGAAA GGGCTA AAA TAGCCC TTTCATCGATAATTA TERM 3667 3330264 - 3330278 + F 84 -10 -3.7791 | opp_overlap 3330259 3330257 3330264 ATCACCAATATGAAA GGGCTA AAA TAGCCC TTTCATCGATAATTA TERM 3668 3330785 - 3330762 - f 71 -8.9 -3.35616 | overlap 3330760 CAGGATTATATAATA GGAGCCACT GACTAT AGTGACTCC TCAGACTGCTGACAA TERM 3669 3331588 - 3331563 - g 80 -7.5 -4.57569 | opp_overlap 3331568 3331581, overlap 3331568 GCAGTTGGGCAAAAA CACAACCCGCC TGCC AGCGGGTCTTG AAAGTCCCTGGTGTG TERM 3670 3331583 - 3331568 - g 76 -8.2 -4.07746 | opp_overlap 3331568 3331581, overlap 3331563 TGGGCAAAAACACAA CCCGCC TGCC AGCGGG TCTTGAAAGTCCCTG YE3064 3330944 - 3331963 + | putative transposase for IS1667 TERM 3671 3331991 - 3331942 - T 100 -19.7 -3.13299 | gap 1, overlap 3331947 TCATCATACGGAATA TCGAACCTTATCCGCGGTTTGAGA TAA TCTCAAAC-ACGGATAAGGCTCAA GAACAAAAGTGAATA TERM 3672 3331986 - 3331947 - T 100 -18.2 -3.19789 | gap 1, overlap 3331942 ATACGGAATATCGAA CCTTATCCGCGGTTTGAGA TAA TCTCAAAC-ACGGATAAGG CTCAAGAACAAAAGT TERM 3673 3332229 - 3332266 + T 76 -7.7 -4.11773 | gap 1, opp_overlap 3332240, overlap 3332224 3332230 CTTGGTTTATTGGGA GCGTCCATATATGGCTCG GGT CGAGCCATC-AGGGACGA TTTTACGGCGTCTTT TERM 3674 3332230 - 3332265 + T 79 -11.2 -3.06341 | gap 1, opp_overlap 3332240, overlap 3332224 3332229 TTGGTTTATTGGGAG CGTCCATATATGGCTCG GGT CGAGCCATC-AGGGACG ATTTTACGGCGTCTT TERM 3675 3332256 - 3332240 - T 89 -12.3 -2.87931 | opp_overlap 3332230 3332229 GGGAGCGTCCATATA TGGCTCG GGT CGAGCCA TCAGGGACGATTTTA TERM 3676 3332329 - 3332352 + T 93 -11.8 -3.68504 | opp_overlap 3332324 TTGTCATTAACCTCA GGAGTCACTG ACTA TAGTGACTCC TTATCTCATTTATTA ushA 3334017 - 3332365 - | bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor fsr 3334410 - 3335516 + | putative membrane efflux protein rosB 3335753 - 3337444 + | putative cation:proton antiport protein TERM 3677 3337504 - 3337473 - T 100 -13.8 -3.98826 | opp_overlap 3337472 3337470 3337477, overlap 3337477 TTAGCAAGTTATAAA CCAATAGGGCCAGC ATAT GCTGGCCCTATTCA CTATTTGACGACAAT TERM 3678 3337500 - 3337477 - T 100 -16.8 -3.63059 | opp_overlap 3337472 3337470 3337477, overlap 3337473 CAAGTTATAAACCAA TAGGGCCAGC ATAT GCTGGCCCTA TTCACTATTTGACGA TERM 3679 3337477 - 3337500 + T 100 -16.8 -3.24021 | opp_overlap 3337477 3337473, overlap 3337472 3337470 CAAGTTATAAACCAA TAGGGCCAGC ATAT GCTGGCCCTA TTCACTATTTGACGA gsk 3338823 - 3337519 - | inosine-guanosine kinase TERM 3680 3338890 - 3338862 - R 100 -6.7 -5.80817 | overlap 3338865 3338867 GGGAAGATAAAAAAA GGAGACCAGAGAT AAA ATCTCTGGCATAC ATAAGTAGTAATACC TERM 3681 3338886 - 3338865 - R 70 -8.1 -3.59802 | gap 1, overlap 3338862 3338867 AAGATAAAAAAAGGA GACCAGAGAT AAA ATCTCTGG-C ATACATAAGTAGTAA TERM 3682 3338885 - 3338867 - R 89 -11.8 -3.33657 | overlap 3338865 3338862 GATAAAAAAAGGAGA CCAGAGAT AAA ATCTCTGG CATACATAAGTAGTA cld 3340103 - 3339012 - | O-antigen chain length determinant galE 3341159 - 3340149 - | UDP-glucose 4-epimerase manB 3342591 - 3341221 - | phosphomannomutase manC 3344000 - 3342603 - | mannose-1-phosphate guanylyltransferase fcl 3344972 - 3344007 - | GDP-fucose synthetase gmd 3346096 - 3344978 - | GDP-mannose 4,6-dehydratase rfpB 3347169 - 3346093 - | putative galactosyltransferase TERM 3683 3346272 - 3346249 - G 74 -9.6 -3.48269 | overlap 3346253 CTCATTAAATAGGAA GCCATTGACC CCAT GTTCAATGGC ATCAATACAGCCTGG TERM 3684 3346607 - 3346619 + g 71 -2.7 -4.84017 | opp_overlap 3346607 ACTAAACGTCCAACA TAGAG TAG TTCTA TTTTTCTCGAGCATT wbcH 3348004 - 3347156 - | putative glycosyl transferase wbcG 3348860 - 3347994 - | putative glycosyltransferase wbcF 3349834 - 3348866 - | hypothetical protein TERM 3685 3348952 - 3348939 - G 83 -3.9 -5.44119 | opp_overlap 3348944 3348946 CTTAGTCTAAAAAAA TCTTT CTCT AAAGA GAGCATTTTTTTTAG TERM 3686 3349787 - 3349771 - G 70 -2.3 -4.86731 | overlap 3349766 3349773 TTTCTTTAAATAAAA TACTTTT AAG AAAAGTC ACACCTGTAGAGAAG wbcE 3350850 - 3349831 - | hypothetical protein TERM 3687 3350533 - 3350521 - G 93 -2.7 -5.93252 | TTGAAAAATAAAAAA CAATT CAT AACTG GCCCCTAAACTCTTA wbcD 3352022 - 3351033 - | putative 6-deoxy-D-Gul transferase rfbX 3353316 - 3352027 - | hypothetical protein TERM 3688 3352351 - 3352324 - G 71 -9.4 -3.53012 | opp_overlap 3352331, overlap 3352325 3352338 3352340 3352342 TTTGCTTTGTTCAAA CTTAATACCATA TATA TATGGTATTAAA AAATACCCTATACCT TERM 3689 3352350 - 3352325 - G 72 -10.7 -2.71712 | opp_overlap 3352331, overlap 3352324 3352338 3352340 3352342 TTGCTTTGTTCAAAC TTAATACCATA TATA TATGGTATTAA AAAATACCCTATACC wbcC 3354353 - 3353349 - | putative glycosyltransferase TERM 3690 3354098 - 3354142 + g 73 -3.5 -4.94962 | opp_overlap 3354106 AATATTTACCGGATG CTAACTTAGGAGCTAACAGAA AGT TTATGTCCGCCCCAAGGTTAG TTTTATTTACATTGT prt 3355297 - 3354419 - | paratose synthase wbcA 3355854 - 3355330 - | putative epimerase ddhB 3357051 - 3355978 - | CDP-glucose 4,6-dehydratase TERM 3691 3356821 - 3356802 - G 78 -5.8 -4.81551 | opp_overlap 3356802 CAGCCATATGAAAAA CGATTTCA GGTT TAAAATCG TTGATTGACTTGAGT ddhA 3357842 - 3357057 - | glucose-1-phosphate cytidylyltransferase TERM 3692 3357880 - 3357899 + r 74 -6.6 -4.3586 | opp_overlap 3357878 3357880 3357896 AAAATAAAAAGTAGA TATCTTTT AGCT AAAAGATA TTTTAATATCGCTAA TERM 3693 3358532 - 3358517 - R 86 -3.2 -5.60689 | TTATAGAATAAAAAA CACTCA GAAA TGTGTG TGAAATTTGAAAAAA hemH 3359578 - 3358610 - | ferrochelatase TERM 3694 3359045 - 3359055 + g 73 -5.4 -4.65933 | opp_overlap 3359045 3359043, overlap 3359031 ATGTTGCACAAAAGA GTGT TCA ACAC TTTGTTTTAGCGCTG TERM 3695 3359156 - 3359143 - G 73 -8.1 -4.09243 | GATAGCCTTGCAAAA TGCGG GCAA CCGCA TCCCAGACCGCCGCA TERM 3696 3359657 - 3359673 + r 72 -9.3 -3.19175 | opp_overlap 3359657 CTGTAAAATAATAAA GGCGACC TTA GGCCGCC TTGACTATCTTACCA TERM 3697 3359673 - 3359657 - R 100 -11.5 -4.67697 | opp_overlap 3359657 CTGTAAAATAATAAA GGCGACC TTA GGCCGCC TTGACTATCTTACCA adk 3360340 - 3359696 - | adenylate kinase TERM 3698 3360410 - 3360399 - R 71 -3 -4.94243 | GTAAAAAAATCAAAA TTGT GGAA ACAA GCAACCTTACCATTT TERM 3699 3360511 - 3360498 - R 70 -2.5 -4.9218 | CAGGCAGGATAAAAA TTTAA TTCA TTAAA ATAAAATAAAAACGC TERM 3700 3360552 - 3360524 - R 100 -9.5 -5.70761 | AAAATAAAATAAAAA CGCCCCGGACACA TTA TCTGTTCGAGGCG TTCCAATACTAAATT htpG 3362440 - 3360566 - | heat shock protein 90 recR 3363378 - 3362773 - | recombination protein RecR TERM 3701 3363329 - 3363292 - G 71 -8.3 -3.78329 | CTGTAGCAATTGAAA TGCCATACGTTGCGCCG ATTT CGGGCCAACGCCCGGCA AGCAACGCAACGCCT YE3092 3363710 - 3363378 - | hypothetical protein TERM 3702 3363637 - 3363649 + g 75 -3.4 -5.17353 | TTGGCGACTTCTTCC TGCA TCTGC TGCA TTTTTTCCTGCATCT dnaX 3365736 - 3363766 - | DNA polymerase III subunits gamma and tau TERM 3703 3363850 - 3363867 + g 82 -5.5 -5.14163 | opp_overlap 3363850 ATCCGCAATAATTGA CTGGCGT GCTT GTGCCAG TTTTTCTTCATAAAT TERM 3704 3364370 - 3364411 + g 77 -4.2 -5.15634 | overlap 3364353 3364376 3364377 AAACGCTCCAGCGCT GAGTTTACCGGCCGCGCT TTTCCT GGCGCTGCCGGCTCATTC TTTTTTGGTGGGGTC TERM 3705 3364377 - 3364404 + g 75 -11.9 -2.53192 | overlap 3364376 3364370 CCAGCGCTGAGTTTA CCGGCCGCGCT TTTCCT GGCGCTGCCGG CTCATTCTTTTTTGG TERM 3706 3365145 - 3365168 + g 75 -3.2 -5.03314 | gap 1 ATGCTCTGGCATCAC TACTGATTTGC TCG GCTAA-CAGTA TTTTTTCGAGCTGGG TERM 3707 3365804 - 3365779 - R 86 -11.9 -3.05963 | opp_overlap 3365779 3365778 3365781 3365791, overlap 3365781 AGGGTCATGCTAACA CAGCCTCACTA CTGA CAGCGAGGCTG ATATTTTCAGTACAA apt 3366383 - 3365820 - | adenine phosphoribosyltransferase TERM 3708 3366541 - 3366525 - R 70 -7.9 -3.60214 | ACCCTAAGGACACAA CGAGGGA TTA TCCCGCG CACGAAAACGCTCAA YE3094A 3366979 - 3366599 - | hypothetical protein TERM 3709 3366900 - 3366869 - G 73 -2.2 -5.02074 | gap 1 GGATCGTGCAAAAAA CCACGCTGCCAGT AGCAAAA AC-GGCGTCGTGG GTAACAGAGGCAACA priC 3367153 - 3367689 + | primosomal replication protein n'' YE3096 3367962 - 3368117 + | hypothetical protein TERM 3710 3368141 - 3368168 + T 78 -10 -3.56727 | opp_overlap 3368144, overlap 3368144 TTTCTGATGTTTAGC CAAGGCGATA CCATCAAA TATCGCCTTG TTGTGGTTCGTTGCA aefA 3371571 - 3368224 - | potassium efflux protein KefA TERM 3711 3368729 - 3368756 + g 73 -4.8 -4.68103 | opp_overlap 3368729 3368732 TCTTTGCGGTCAAAA TCAGTGATCGTG GTGG CACGAATACGGA TTTTGTTAACATTGC YE3098 3372154 - 3371864 - | hypothetical protein acrR 3372900 - 3372244 - | DNA-binding transcriptional repressor AcrR TERM 3712 3372354 - 3372370 + g 71 -6.5 -4.18197 | TTATATCAAAACTTT CTGGCAT AAA AAGCCAG TTTTCCATCAAACCT TERM 3713 3373074 - 3373056 - g 78 -6 -4.77438 | ATCTATGAGCAAAAA CAGAGG GGTAATG CCTCTG GCTGCAATTCTGGTA TERM 3714 3374210 - 3374200 - g 76 -2.4 -5.27206 | overlap 3374201 3374204 GAGACAGAACAAAAA GCAG CCC CGGC TGACACAGCGAAGAA acrA 3373045 - 3374232 + | multidrug efflux protein TERM 3715 3374380 - 3374331 - g 82 -11.6 -3.29144 | opp_overlap 3374336, overlap 3374335 GTAGCCTGGCGATAA TGAAGTTACCCGTAGCGCAATA TCCGAC CATTGCGCCACCGGCAATTTCA ATCTCCGCCAACTAC TERM 3716 3374988 - 3374936 - g 74 -9.4 -3.65046 | gap 1, overlap 3374984 GTTCCAGGGCAAGAA CTGAACTCCTCCATTATTGCTCAGA CCCG TCTGACCAATG-CGGAAGAATTCAG CCAAATCATGCTGAA acrB 3374249 - 3377401 + | multidrug efflux protein TERM 3717 3377436 - 3377451 + F 100 -11.8 -4.96646 | opp_overlap 3377436 ATGTCATATTTAAAA GGCCGC AAAT GCGGCC TTTTTCGTTATCTCC TERM 3718 3377451 - 3377436 - f 100 -11.8 -4.23758 | opp_overlap 3377436 ATGTCATATTTAAAA GGCCGC AAAT GCGGCC TTTTTCGTTATCTCC YE3102 3377642 - 3378004 + | hypothetical protein TERM 3719 3378694 - 3378676 - g 83 -6.6 -4.93365 | TTTGATAATGAAAAA GGCAAGAC ACT GCCTAGCC CAAATCTCAGCACAT TERM 3720 3379079 - 3379102 + G 74 -11 -3.03701 | overlap 3379074 GTCTTACCGAGCCAT TCGCCATCGG CAGC CCGGTGGTGA TGTGCTTTCGTACAC YE3103 3378070 - 3379245 + | hypothetical protein TERM 3721 3379912 - 3379930 + G 73 -7.4 -4.24123 | opp_overlap 3379912 TTAACAGTCCAAAAT CCGGTGTT TAC GATACCGG TTTTCAGGTTATTCA YE3104 3379242 - 3380507 + | putative mutase YE3105 3380563 - 3380928 + | hypothetical protein TERM 3722 3381019 - 3380997 - f 71 -4.8 -4.60292 | opp_overlap 3381017, overlap 3381001 3381005 GACAACAATAATAAA CAAATTAGCC TGG GGCTCATTGG CCCCGATGGGGTCGT TERM 3723 3381015 - 3381001 - f 71 -4.2 -4.79953 | overlap 3380997 3381005 ACAATAATAAACAAA TTAGCC TGG GGCTCA TTGGCCCCGATGGGG YE3106 3381038 - 3382321 + | hypothetical protein TERM 3724 3382376 - 3382353 - f 93 -11.8 -3.65522 | opp_overlap 3382355 CACCTAGCTTAACAA GTCCGCAAAC TGCG GTTTGCGAAC CGACTACTGACAAAG TERM 3725 3382355 - 3382367 + F 73 -9.1 -3.53224 | opp_overlap 3382353 CCTAGCTTAACAAGT CCGCA AAC TGCGG TTTGCGAACCGACTA TERM 3726 3382506 - 3382529 + F 82 -3.1 -5.47159 | overlap 3382507 3382508 GTTTGTCATTAACCT CTCCGCAAA TTTCGC TTTGCGGGC TTTTTATTTATTCGG rpmE2 3382624 - 3382884 + | 50S ribosomal protein L31 type B rpmJ 3382900 - 3383043 + | 50S ribosomal protein L36 TERM 3727 3383067 - 3383099 + T 90 -11.4 -3.57406 | opp_overlap 3383072, overlap 3383072 GTATTACCTGCTACT AAAAAGCCCCGTTG CTGCC CAATGGGGCTTTTC TATTTGTCATCAAAG TERM 3728 3383094 - 3383072 - T 100 -9.1 -4.7254 | opp_overlap 3383067 3383072 ACCTGCTACTAAAAA GCCCCGTTG CTGCC CAATGGGGC TTTTCTATTTGTCAT TERM 3729 3383072 - 3383094 + T 100 -11.3 -4.85822 | opp_overlap 3383072, overlap 3383067 ACCTGCTACTAAAAA GCCCCGTTG CTGCC CAATGGGGC TTTTCTATTTGTCAT YE3109 3384049 - 3383171 - | periplasmic solute binding protein TERM 3730 3383998 - 3383964 - G 85 -5.6 -5.28983 | CCTAAAATAGAAAAA CTGGCAACGGCTGCAA CCG TTTTGGCCATCGCCAG TGGGCTTGACAGTAG YE3110 3384952 - 3384095 - | putative ABC-transporter membrane protein TERM 3731 3384459 - 3384442 - G 73 -3.3 -4.84359 | overlap 3384443 TCACCCGTAGAAAAA CGGGGTC AAAT GACTCCA CCACCAATGCGCGAT YE3111 3385677 - 3384949 - | ABC transport system ATP-binding protein TERM 3732 3386135 - 3386123 - H 74 -4.8 -4.81306 | opp_overlap 3386128 3386130, overlap 3386124 3386125 3386127 TGCAATAAAAAATAA GCCA TGCGG TGGC CCCACCTCTTGATCA YE3113 3386447 - 3386800 + | hypothetical protein YE3114 3386958 - 3387326 + | hypothetical protein ymoA 3387372 - 3387575 + | hemolysin expression-modulating protein TERM 3733 3387635 - 3387604 - f 78 -9.6 -3.68962 | gap 1, opp_overlap 3387610, overlap 3387576 GGTTAAGACACACAA CGTTGA-GCCGATAA TCG TTATCGGCTTCAATG CAGTAAGCGGGTTGT TERM 3734 3387610 - 3387628 + F 86 -11.8 -3.06796 | opp_overlap 3387576 3387604 GACACACAACGTTGA GCCGATAA TCG TTATCGGC TTCAATGCAGTAAGC TERM 3735 3388688 - 3388677 - g 71 -7.2 -3.97331 | opp_overlap 3388680 AAGGTATTGAAATAA GCCC TGCC GGGC GGATTGATTTACAGC YE3116 3388337 - 3388726 + | putative 6-O-methylguanine DNA methyltransferase family protein TERM 3736 3388773 - 3388720 - T 100 -14.7 -3.02263 | gap 1, overlap 3388722 3388745 ATATCGTTGGCAATA CAGCTAGCTTCA-GCGCCACAGGGAA CTA TGCCCTGTAGCGCATAAAGCCAGTCG AAAGTTACTGTATCG TERM 3737 3388771 - 3388722 - T 100 -13.7 -3.06815 | gap 1, overlap 3388720 3388745 ATCGTTGGCAATACA GCTAGCTTCA-GCGCCACAGGGAA CTA TGCCCTGTAGCGCATAAAGCCAGT CGAAAGTTACTGTAT ybaY 3389308 - 3388778 - | putative lipoprotein tesB 3389566 - 3390429 + | acyl-CoA thioesterase II TERM 3738 3390449 - 3390437 - T 73 -2.7 -5.21709 | GGTTATAGCAAAAAA TCGTT CAT AACAA AAAATAGAAGGGCGA TERM 3739 3390483 - 3390454 - T 87 -4.9 -5.55769 | overlap 3390456 3390459 GTTCATAACAAAAAA TAGAAGGGCGATG TCTC CATCGCCCCCAGA CTGCTGACAAACCTC TERM 3740 3390480 - 3390456 - T 87 -8.6 -4.41512 | gap 1, overlap 3390454 3390459 TCATAACAAAAAATA GAAGGGCGATG TCTC CATCGCCCC-C AGACTGCTGACAAAC TERM 3741 3390478 - 3390459 - T 100 -13.6 -4.27001 | overlap 3390456 3390454 TAACAAAAAATAGAA GGGCGATG TCTC CATCGCCC CCAGACTGCTGACAA TERM 3742 3390645 - 3390666 + T 84 -10.1 -3.8512 | overlap 3390646 TTTGTCATTAACCTC AGGGCGATG TCTC CATCGCCCC TTATTCTGCTACATC TERM 3743 3390646 - 3390665 + T 100 -13.6 -2.9059 | overlap 3390645 TTGTCATTAACCTCA GGGCGATG TCTC CATCGCCC CTTATTCTGCTACAT amtB 3392024 - 3390729 - | ammonium transporter TERM 3744 3391983 - 3391969 - G 70 -7.8 -3.92542 | GCCATTGCCAAAGAA GGCAGC ATC GCTACC GAACTCAGGCCCAAC glnK 3392396 - 3392058 - | nitrogen regulatory protein P-II 2 TERM 3745 3392819 - 3392795 - R 79 -8.5 -4.14392 | opp_overlap 3392795 GTGGAATGGCGAAAA GTGATGGAGCC GCT GACCCCATCGC TTATTCTTTAACTGA mdl 3394605 - 3392827 - | putative multidrug transporter membrane\ATP-binding components TERM 3746 3393022 - 3393003 - G 74 -10 -3.58533 | opp_overlap 3393016 CGACAATCGTTGAAA GGCGGTGA GCTA TCACCACC AGCGTGGTGTTTTTG TERM 3747 3393016 - 3393031 + g 90 -9 -4.59773 | opp_overlap 3393003 AAGGCGGTGAGCTAT CACCAC CAGC GTGGTG TTTTTGCGAATCAAC TERM 3748 3394114 - 3394098 - G 74 -6.5 -4.47049 | overlap 3394101 AAATACAAATAGAAA TCAGCGC CAT GCGCCAA TCCAGACTGAACATC mdl 3396364 - 3394598 - | putative multidrug transporter membrane\ATP-binding components YE3123 3397100 - 3396639 - | transcription regulator AsnC TERM 3749 3397867 - 3397878 + G 90 -5.8 -5.4111 | TGATGGTGGTCGATC CGGA AAAC TCCG TTTTTTATGATTGTT YE3124 3397227 - 3398267 + | putative pyridoxal-phosphate dependent protein TERM 3750 3398300 - 3398280 - T 81 -9.6 -3.89501 | opp_overlap 3398281, overlap 3398281 3398292 TAATATCGTGATAAA CGGGGCCG TAAAC CGGCCCCT TTCAGAATAAAAAAA TERM 3751 3398299 - 3398281 - T 95 -13.1 -2.93219 | opp_overlap 3398281, overlap 3398280 3398292 AATATCGTGATAAAC GGGGCCG TAAAC CGGCCCC TTTCAGAATAAAAAA TERM 3752 3398281 - 3398299 + T 100 -13.1 -3.57144 | opp_overlap 3398280 3398281 3398292 AATATCGTGATAAAC GGGGCCG TAAAC CGGCCCC TTTCAGAATAAAAAA TERM 3753 3398332 - 3398317 - T 100 -9 -6.17268 | overlap 3398292 TCAGAATAAAAAAAA CCGGAT GGTT ATCCGG CTGGCTAATAGCTAC YE3125 3399215 - 3398394 - | putative haloacid dehalogenase-like hydrolase YE3126 3399319 - 3401022 + | hypothetical protein YE3127 3401136 - 3401834 + | queuosine biosynthesis protein QueC YE3128 3402328 - 3401921 - | hypothetical protein TERM 3754 3402548 - 3402522 - R 82 -8 -4.56597 | GTTCCTGGTGAAAAA GCCAGGCAAACA CAG CATCTGCCTGAC TGCGATATCTGTTTT YE3129 3402997 - 3402575 - | hypothetical protein TERM 3755 3403078 - 3403103 + r 100 -13.3 -3.68341 | opp_overlap 3403076 3403083, overlap 3403083 CAGATTTTAGATATG CGAAAGGCCGC CAAA GCGACCTTTCG TTGTTACATCCAATT TERM 3756 3403098 - 3403083 - R 73 -8.2 -3.65425 | opp_overlap 3403078 3403083, overlap 3403076 TTTAGATATGCGAAA GGCCGC CAAA GCGACC TTTCGTTGTTACATC ppiD 3405022 - 3403136 - | peptidyl-prolyl cis-trans isomerase (rotamase D) TERM 3757 3403335 - 3403357 + g 77 -4.8 -4.87665 | opp_overlap 3403340 TCTTGGCGATCCTGA GACAAGCC ATATACC GGCTGGTC TTTTTGTGGATGAGG TERM 3758 3405146 - 3405127 - R 100 -10 -5.75342 | opp_overlap 3405113 3405126 3405127 3405140 CTGCGCGAAAAAAAA GCGCATCA TTAA CGATGCGC CTTGTATCTTACCTT TERM 3759 3405127 - 3405146 + r 70 -9.3 -2.81609 | opp_overlap 3405127, overlap 3405113 3405126 3405140 CTGCGCGAAAAAAAA GCGCATC ATTAAC GATGCGC CTTGTATCTTACCTT hopD 3405494 - 3405222 - | transcriptional regulator HU subunit beta TERM 3760 3405679 - 3405649 - R 79 -3.4 -5.252 | gap 1, opp_overlap 3405650, overlap 3405651 TAGCGGCACAAAAAA TAGCTGGCAAGTA GCATTT CACTTACCAGC-A TCAGTTTTATCAATA TERM 3761 3405678 - 3405651 - R 82 -8.5 -4.25873 | opp_overlap 3405650, overlap 3405649 GCGGCACAAAAAATA GCTGGCAAGTA GCATTT CACTTACCAGC ATCAGTTTTATCAAT capR 3408066 - 3405712 - | DNA-binding ATP-dependent protease La TERM 3762 3408227 - 3408209 - R 100 -13.2 -4.91852 | opp_overlap 3408209 GCGAGGAAAAAGAAA TGGGGGAT AAA ATCCCCCA TTGTCATACTAACCA TERM 3763 3408209 - 3408227 + r 100 -13.2 -3.44051 | opp_overlap 3408209 GCGAGGAAAAAGAAA TGGGGGAT AAA ATCCCCCA TTGTCATACTAACCA clpX 3409532 - 3408261 - | ATP-dependent protease ATP-binding subunit clpP 3410361 - 3409738 - | ATP-dependent Clp protease proteolytic subunit TERM 3764 3410767 - 3410744 - R 100 -10.2 -5.50723 | opp_overlap 3410744 TTACTAAAAGAAAAA GCCCGTGACC ATAG GGCTACGGGC TTTTTCAATACACCA TERM 3765 3410744 - 3410767 + r 100 -10.2 -4.65895 | opp_overlap 3410744 TTACTAAAAGAAAAA GCCCGTGACC ATAG GGCTACGGGC TTTTTCAATACACCA TERM 3766 3410830 - 3410816 - R 70 -2.8 -5.07567 | opp_overlap 3410823 TGATACGCTAAAAAA CATTAC GCC GTAGTG GTCTGATTCATCAGC tig 3412122 - 3410818 - | trigger factor YE3136 3412352 - 3412077 - | hypothetical protein TERM 3767 3412474 - 3412449 - R 71 -6.8 -4.12532 | overlap 3412433 3412451 3412454 TCGCCTATATAGAAA CACAAGCGGC TCTAGG GCCGCCTGCA AAATTCTCACCTACT TERM 3768 3412472 - 3412451 - R 78 -9.4 -3.65996 | overlap 3412433 3412449 3412454 GCCTATATAGAAACA CAAGCGGC TCTAGG GCCGCCTG CAAAATTCTCACCTA TERM 3769 3412469 - 3412454 - R 72 -7.5 -3.95348 | overlap 3412433 3412451 3412449 TATATAGAAACACAA GCGGC TCTAGG GCCGC CTGCAAAATTCTCAC bolA 3412870 - 3412538 - | transcriptional regulator BolA TERM 3770 3413035 - 3413025 - H 70 -5.4 -4.45544 | TCTCATCAACCAAAA TGCA ATT TGCA AGGGCTTTAAATTAA yajG 3413221 - 3413799 + | hypothetical protein TERM 3771 3413864 - 3413837 - f 90 -11.3 -3.66288 | TACTGCTTAACAGAA TGCTCCGCCCT GCCGAT AGGGTGGAGCA CGTAGGTCTCACATG ampG 3413877 - 3415355 + | muropeptide transporter TERM 3772 3415378 - 3415395 + F 100 -9.1 -5.71983 | opp_overlap 3415378 CTACATTTCATGAAA GCCGGTA CTTG TGCCGGC TTTTTTTATGGTTGC TERM 3773 3415568 - 3415578 + F 88 -6.8 -5.14682 | CGCACTTTTTGTTAA GGAC TGT GTCC TTTTATTTCTTCTGG yfeN 3415620 - 3416399 + | hypothetical protein TERM 3774 3416405 - 3416441 + F 78 -5.2 -4.99134 | gap 1, opp_overlap 3416405 3416408, overlap 3416406 3416408 TAATTTCTAGCTAAA TGATTCCGGGGTACCTA TTTT TA-GCACCCCGGAATAG TTTTTAATTTACCGT TERM 3775 3416440 - 3416405 - f 73 -8.4 -3.65827 | gap 1, opp_overlap 3416405 3416406 3416408, overlap 3416408 TAATTTCTAGCTAAA TGATTCCGGGGTACCTA TTT TTAGCACCCCGGAAT-A GTTTTTAATTTACCG TERM 3776 3416438 - 3416408 - f 93 -12.6 -2.94144 | opp_overlap 3416408 3416406 3416405, overlap 3416405 TTTCTAGCTAAATGA TTCCGGGGTACCTA TTT TTAGCACCCCGGAA TAGTTTTTAATTTAC TERM 3777 3416408 - 3416438 + F 71 -9.1 -3.35798 | gap 1, opp_overlap 3416405 3416408, overlap 3416406 3416405 TTTCTAGCTAAATGA TTCCGGGGTACCTA TTTT TA-GCACCCCGGAA TAGTTTTTAATTTAC TERM 3778 3416668 - 3416648 - f 79 -8.3 -4.1891 | CCCCCTTAACATAAA GTGTCAACA AGC CGCTGACAC AATCTTAAGCATGTT cyoA 3416762 - 3417718 + | cytochrome o ubiquinol oxidase subunit II cyoB 3417723 - 3419714 + | cytochrome O ubiquinol oxidase subunit I TERM 3779 3419759 - 3419733 - g 79 -10.8 -3.54029 | overlap 3419734 TCTGACTAACCATAA CGTCGCCCATGC AGA GCATGGGCATCA CGATGCAGGAGCGAC TERM 3780 3419758 - 3419734 - g 78 -12.1 -2.72096 | overlap 3419733 CTGACTAACCATAAC GTCGCCCATGC AGA GCATGGGCATC ACGATGCAGGAGCGA TERM 3781 3420006 - 3419991 - g 100 -9 -4.89393 | opp_overlap 3419991 3420005 CAAAGGCCACAAAAA CCAGGT TAAC ACCTGG TTAGGTCTGACCTTC cyoC 3419704 - 3420318 + | cytochrome o ubiquinol oxidase subunit III cyoD 3420378 - 3420665 + | cytochrome O ubiquinol oxidase subunit CyoD cyoE 3420676 - 3421566 + | protoheme IX farnesyltransferase TERM 3782 3421616 - 3421590 - f 100 -10.1 -4.82901 | opp_overlap 3421590 CTGTTGTGATAAAAA TGGCTGGCGGG CTATT CCTACCAGCCA TTTTTTATTTCTTCG TERM 3783 3421590 - 3421616 + F 100 -10.1 -5.80003 | opp_overlap 3421590 CTGTTGTGATAAAAA TGGCTGGCGGG CTATT CCTACCAGCCA TTTTTTATTTCTTCG TERM 3784 3421814 - 3421826 + G 73 -7.7 -4.1021 | GGTATTTTCTTTGCG CATGC TCG GCATG TTTATGGTTCTCCCC TERM 3785 3421918 - 3421929 + G 78 -5.8 -4.67234 | overlap 3421914 TTGGTATTTACGGTC TGGC TCAG GCCA TTTTTCAGATTCCAT yajR 3421737 - 3423107 + | putative transporter TERM 3786 3423153 - 3423109 - T 74 -8.1 -4.06491 | opp_overlap 3423114 3423117, overlap 3423114 3423115 3423117 TCAACGCGATATAAA CAAAAGCAGGTACAAAAGT GATCGAT ACTTTTGTACCTAATTTAG CTAAATATTAGTCGC TERM 3787 3423148 - 3423114 - T 86 -6.6 -5.05113 | opp_overlap 3423114 3423117, overlap 3423109 3423115 3423117 GCGATATAAACAAAA GCAGGTACAAAAGT GATCGAT ACTTTTGTACCTAA TTTAGCTAAATATTA TERM 3788 3423147 - 3423115 - T 80 -10.1 -3.61983 | opp_overlap 3423114 3423117, overlap 3423114 3423109 3423117 CGATATAAACAAAAG CAGGTACAAAAGT GATCGAT ACTTTTGTACCTA ATTTAGCTAAATATT TERM 3789 3423145 - 3423117 - T 78 -10.5 -3.36868 | opp_overlap 3423114 3423117, overlap 3423115 3423114 3423109 ATATAAACAAAAGCA GGTACAAAAGT GATCGAT ACTTTTGTACC TAATTTAGCTAAATA TERM 3790 3423117 - 3423145 + T 79 -11.2 -2.9462 | opp_overlap 3423117 3423115 3423114 3423109, overlap 3423114 ATATAAACAAAAGCA GGTACAAAAGTG ATCGA TACTTTTGTACC TAATTTAGCTAAATA YE3147 3423652 - 3423161 - | nucleotide-binding protein YE3148 3423827 - 3424108 + | hypothetical protein apbA 3423990 - 3424901 + | 2-dehydropantoate 2-reductase thiJ 3424864 - 3425460 + | hypothetical protein thiI 3427073 - 3425622 - | thiamine biosynthesis protein ThiI xseB 3427349 - 3427603 + | exodeoxyribonuclease VII small subunit ispA 3427608 - 3428528 + | geranyltranstransferase TERM 3791 3429607 - 3429587 - g 71 -9 -3.54935 | overlap 3429600 GAAACCGCCGCTAAA GACAGCCA GTTAA TGGCCGTC ACTCCCGCCATGCGC TERM 3792 3430268 - 3430255 - g 75 -5.2 -4.78237 | CACTGTAGAAGAAAA CGCC ATTATG GGCG GCGCGGGCAGTGGTG b0420 3428582 - 3430441 + | 1-deoxy-D-xylulose-5-phosphate synthase YE3156 3430931 - 3430443 - | hypothetical protein TERM 3793 3430475 - 3430525 + g 76 -8.9 -3.81027 | gap 2, opp_overlap 3430468, overlap 3430513 3430514 TGAGCCAAGGGCGAC CACTCC-TACGGG-CGCTCCGGCGG CTT TCGCCGCTACGACCCGAACGGAGTG TTTCCCTTGGTTCGG pgpA 3431447 - 3430950 - | phosphatidylglycerophosphatase A TERM 3794 3431011 - 3430994 - G 77 -4.9 -4.91109 | GCCCCACGACAAAAA TAATTGC CGCC GCAACTA CACCCGCGATAATGT thiL 3432429 - 3431440 - | thiamine monophosphate kinase TERM 3795 3432490 - 3432460 - R 100 -13.4 -3.22091 | overlap 3432464 3432468 ATGTTAACTGATCAA TAAATTAAGGCCGG AAA CCGGCCCCAATTCA AGTCGTTAATGTAAC TERM 3796 3432486 - 3432464 - R 100 -12 -4.26871 | overlap 3432460 3432468 TAACTGATCAATAAA TTAAGGCCGG AAA CCGGCCCCAA TTCAAGTCGTTAATG TERM 3797 3432482 - 3432468 - R 100 -12.8 -3.70925 | overlap 3432464 3432460 TGATCAATAAATTAA GGCCGG AAA CCGGCC CCAATTCAAGTCGTT nusB 3432925 - 3432509 - | transcription antitermination protein NusB TERM 3798 3432835 - 3432851 + g 73 -5.1 -4.57569 | opp_overlap 3432838, overlap 3432838 ACAGGAACTGTAATT CAACATC AGC GATGTCG TTTTTAGACAACTGC ribH 3433421 - 3432951 - | riboflavin synthase subunit beta ribD 3434665 - 3433556 - | bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase YE3162 3435179 - 3434730 - | transcriptional regulator NrdR TERM 3799 3435228 - 3435258 + r 74 -6.7 -4.2772 | opp_overlap 3435210 ACAGTTTACCGCGAA CTGCCGCGACAAC AAAGG GTGGAAGCGGCAG TTTATGTTGATTAAG TERM 3800 3435430 - 3435375 - R 100 -17 -3.42985 | opp_overlap 3435378 3435384 3435387, overlap 3435387 ATAACACATTGAGAA GGTCGAAAAAAAGCCCCGATACCGCT ATAT ACCGGTATCAGGGCTTATTTTCGTTC TATCGTTTACGACTT TERM 3801 3435378 - 3435427 + r 100 -19.5 -3.6471 | opp_overlap 3435375 3435387, overlap 3435384 3435387 ACACATTGAGAAGGT CGAAAAAAAGCCCCGATACCGCT ATAT ACCGGTATCAGGGCTTATTTTCG TTCTATCGTTTACGA TERM 3802 3435384 - 3435421 + r 100 -11.3 -4.53636 | opp_overlap 3435375 3435387, overlap 3435378 3435387 TGAGAAGGTCGAAAA AAAGCCCCGATACCGCT ATAT ACCGGTATCAGGGCTTA TTTTCGTTCTATCGT TERM 3803 3435418 - 3435387 - R 100 -15.2 -5.43866 | opp_overlap 3435384 3435378 3435387, overlap 3435375 GAAGGTCGAAAAAAA GCCCCGATACCGCT ATAT ACCGGTATCAGGGC TTATTTTCGTTCTAT TERM 3804 3435387 - 3435418 + r 100 -13 -4.36586 | opp_overlap 3435387 3435375, overlap 3435384 3435378 GAAGGTCGAAAAAAA GCCCCGATACCGCT ATAT ACCGGTATCAGGGC TTATTTTCGTTCTAT secF 3436412 - 3435444 - | preprotein translocase subunit SecF secD 3438270 - 3436423 - | preprotein translocase subunit SecD TERM 3805 3438131 - 3438161 + g 77 -10.5 -3.53091 | gap 1 TGGACCAGCGTTGTT TCACTGGCG-GCGA TTCC TCGCGCACCAGTGA TTTGAACAGCCGGAT yajC 3438630 - 3438298 - | preprotein translocase subunit YajC tgt 3439879 - 3438743 - | queuine tRNA-ribosyltransferase TERM 3806 3439801 - 3439786 - G 73 -10.4 -3.18264 | opp_overlap 3439784, overlap 3439797 TGCCGTAGGTACCAA CCGGCA TAAA TGCCGG GGTCTCTACGACACC YE3169 3440614 - 3440928 + | IS1669 hypothetical protein TERM 3807 3441742 - 3441710 - g 100 -16.5 -3.63744 | opp_overlap 3441715, overlap 3441715 TCTGTCGTTAAAATA CAAAACGCCCGATGA AGT TCATCAGGCGTTTTA AGGCTGAAAAGTGTC TERM 3808 3441737 - 3441715 - g 100 -14.2 -4.89567 | opp_overlap 3441715, overlap 3441710 CGTTAAAATACAAAA CGCCCGATGA AGT TCATCAGGCG TTTTAAGGCTGAAAA TERM 3809 3441715 - 3441737 + G 95 -12 -4.11216 | opp_overlap 3441715 3441710 CGTTAAAATACAAAA CGCCCGATGA AGT TCATCAGGCG TTTTAAGGCTGAAAA YE3170 3440946 - 3441743 + | putative transposase for insertion element IS1669 TERM 3810 3441947 - 3441923 - T 70 -2.7 -4.99035 | overlap 3441927 CGACTTAGACAAAAA CGAAGCCATCA TTA TGACTGCCGCG CAAAAGCCGACCTCA TERM 3811 3442199 - 3442227 + T 86 -11.7 -3.35046 | opp_overlap 3442213, overlap 3442198 TTAACCAACGTTTAC CCCGGAGACAG ATAGCGC CTGGCTCCGGG TGTTTCAGGGGGTAA queA 3443384 - 3442296 - | S-adenosylmethionine:tRNA ribosyltransferase-isomerase TERM 3812 3442472 - 3442454 - G 71 -6.8 -4.22407 | opp_overlap 3442458, overlap 3442455 CAGCAAAAGCAGAAA CCAACATT ATC AATGTTGA TTCAGGTAAGTGGAA TERM 3813 3443314 - 3443304 - G 73 -8.2 -3.82378 | ATCCAGTGACAATAA GCGG CAA CCGC TACGCTGGGGCTGAG YE3173 3443527 - 3444108 + | hypothetical protein ahpC 3444333 - 3444935 + | putative alkyl hydroperoxide reductase subunit c TERM 3814 3444999 - 3444976 - f 100 -15.4 -3.15544 | opp_overlap 3444976 GCTCAGGGGTATCAA GCCAGTCAGT TCAC ACTGACTGGC TTTTTTTATGCTGAT TERM 3815 3444976 - 3444999 + F 100 -15.4 -5.67967 | opp_overlap 3444976 GCTCAGGGGTATCAA GCCAGTCAGT TCAC ACTGACTGGC TTTTTTTATGCTGAT TERM 3816 3445256 - 3445285 + F 100 -11.5 -4.85129 | GCCAGGCATTAGGGA GCCTCGTATTGAT TAAC GTCAGTACGGGGC TTTTTCCTATCTGCT TERM 3817 3446892 - 3446904 + G 100 -10.5 -4.75372 | TGCAGTCGTCATTGC GCCGG GTA CCGGC TTTTTCCTGAATGAT ggt 3445681 - 3447444 + | gamma-glutamyltranspeptidase precursor TERM 3818 3447471 - 3447496 + T 83 -11.9 -2.59267 | overlap 3447470 TACTAATCTGACTCA TCCCCCATCAA TATA TCGATGGGGGA ATTCATCTGCTTAGA YE3176 3448192 - 3447512 - | short chain dehydrogenase TERM 3819 3448283 - 3448269 - R 100 -8.5 -5.38326 | TCAACCAAAGAAAAA GCGGC GCTTA GCCGC TTCAGACTGCTGACA TERM 3820 3448453 - 3448467 + r 82 -8.5 -4.34402 | TGTCATTAACCTCAA GCGGC GCTTA GCCGC TTTTAATATCCCACA malZ 3450364 - 3448526 - | maltodextrin glucosidase TERM 3821 3450010 - 3449989 - G 85 -5.1 -5.28826 | overlap 3449990 AAATTTGATAAAAAA TCTGATCGG CAAC CCAATCAGG GCCACTGTCTGGCAG TERM 3822 3450009 - 3449990 - G 71 -8.6 -3.75669 | overlap 3449989 AATTTGATAAAAAAT CTGATCGG CAAC CCAATCAG GGCCACTGTCTGGCA TERM 3823 3450585 - 3450569 - R 73 -5.7 -4.48664 | overlap 3450570 TAAAGAGACAACAAA GCCGGGA TAT CCCCGGA TTCAGACTGCTGACA TERM 3824 3450584 - 3450570 - R 74 -9.2 -3.27572 | overlap 3450569 AAAGAGACAACAAAG CCGGGA TAT CCCCGG ATTCAGACTGCTGAC proY 3452120 - 3450729 - | putative proline-specific permease TERM 3825 3452171 - 3452151 - R 100 -9.7 -4.72272 | TTTTTTCAGCAAAAA GCCACGG GGATGAG CCGTGGC TAAAAATACTCGATA brnQ 3453515 - 3452196 - | branched-chain amino acid transport system II carrier protein TERM 3826 3453088 - 3453070 - G 76 -11 -3.21395 | overlap 3453068 AGTGGCGCGAGAATA TGCCCGAC CGT GTCGAGCA AACGCCCCGGATACA TERM 3827 3454515 - 3454476 - R 70 -3.7 -4.87665 | gap 3, overlap 3454487 CCTGATGGACAAAAA CCACCAAT-GC-ATCCACTG CGA CAG-GGACAGCAAGTGGTGG ATAGCCATAACGCTC phoR 3456195 - 3454879 - | phosphate regulon sensor protein TERM 3828 3455152 - 3455180 + g 75 -7.6 -4.26903 | gap 1 CTGAAATTGCGCCCC TTGAGGTGT-TTG CTGC CAGCACACCTCAA TTTTGGTGCCATCAG phoB 3456909 - 3456220 - | phosphate regulon transcriptional regulatory protein TERM 3829 3458277 - 3458260 - g 71 -6.3 -4.23781 | overlap 3458263 GGCAGGAAAAGGAAA CACTCAA TGAA CTGAGTG TCACTGATGTATTTG sbcD 3457179 - 3458417 + | exonuclease subunit SbcD TERM 3830 3458789 - 3458773 - g 73 -7.9 -4.13767 | GGCGCTATGCGAAAA CGGCAAG ATT CTGGCCG ATAAAGTGCGCGATA sbcC 3458414 - 3462103 + | exonuclease YE3185 3463307 - 3462393 - | fructokinase TERM 3831 3463464 - 3463475 + H 75 -5.8 -4.58303 | ACAATCTCTGGCACA CGCA ATTT TGCG TTTTGTCGTATTTGA TERM 3832 3463631 - 3463607 - H 84 -11.3 -3.14132 | CCTGCGTTTGATTAA CTCGCGCGCTC CAG GCGCGCCCGAG CCAGGGATAACACTA rdgC 3463646 - 3464557 + | recombination associated protein TERM 3833 3464612 - 3464590 - T 100 -12 -3.76232 | GCGCCAAATATATAA GCCCTCTCGA CAT TTGAGAGGGC AAATTCAAAGAATAA YE3187 3464916 - 3464629 - | hypothetical protein aroL 3465924 - 3465400 - | shikimate kinase II TERM 3834 3466000 - 3465980 - R 81 -5.3 -5.21709 | overlap 3465981 CTCGATATCAAAAAA CCGGCCACT ATT ATTGGCCGC TTAAACTGGATTAAC TERM 3835 3465999 - 3465981 - R 75 -8.8 -3.72302 | overlap 3465980 TCGATATCAAAAAAC CGGCCACT ATT ATTGGCCG CTTAAACTGGATTAA YE3189 3468308 - 3466167 - | putative hydroxamate-type ferrisiderophore receptor YE3190 3469413 - 3468295 - | hypothetical protein YE3191 3470193 - 3469636 - | putative methyltransferase TERM 3836 3470340 - 3470377 + r 79 -7.9 -4.29738 | opp_overlap 3470340 3470336 CACTAAAACAATCAA GCCCGATATAATAAT AAATAACC ATTGTCATATCGGGC TTTTAATCAATATCA TERM 3837 3470377 - 3470340 - R 78 -9.3 -3.70405 | opp_overlap 3470340, overlap 3470336 CACTAAAACAATCAA GCCCGATATAATAATAA ATAA CCATTGTCATATCGGGC TTTTAATCAATATCA YE3192 3470707 - 3470438 - | hypothetical protein TERM 3838 3470910 - 3470878 - R 82 -3.3 -5.54885 | opp_overlap 3470881, overlap 3470881 AATATGAATAAAAAA GAAGGACGCCAGTAT AAT ATACCGCCGCCCATT TATATATATTTAGAT TERM 3839 3470907 - 3470881 - R 100 -9.4 -4.82661 | opp_overlap 3470881, overlap 3470878 ATGAATAAAAAAGAA GGACGCCAGTAT AAT ATACCGCCGCCC ATTTATATATATTTA YE3193 3471690 - 3470920 - | hypothetical protein TERM 3840 3471002 - 3471012 + g 78 -5.4 -4.87665 | TGATTAATTACGCTA TCAG ATG CTGA TTTTTGTAGCTCACG TERM 3841 3471650 - 3471664 + g 74 -10 -3.58242 | opp_overlap 3471650 3471649, overlap 3471648 GCCTGATCACCAAAC TGCCGT TCA ACGGCA TCTTTGTGGCTATTT YE3194 3471834 - 3472328 + | acetyltransferase (GNAT) family protein YE3195 3472727 - 3472473 - | hypothetical protein YE3196 3481480 - 3472856 - | putative cyclic beta 1-2 glucan synthetase TERM 3842 3475593 - 3475605 + g 74 -9.1 -3.66095 | opp_overlap 3475578 GGGCGCGACTGGCTG CTGCG CAC CGCAG TTTCAATGGCGATTT TERM 3843 3478407 - 3478395 - G 74 -6.3 -4.37886 | TCAGGCGTGACAAAA GTTTC GAA GAAAC GCCAGGTACGGCGGG TERM 3844 3478647 - 3478635 - G 83 -6.9 -4.84761 | overlap 3478637 ATATGGCGATAAAAA CCGGC TAA ACCGG GGCGCGGCTTGCCTG TERM 3845 3479410 - 3479390 - G 76 -8.3 -4.07568 | opp_overlap 3479378 GCCGGGGCCGGAAAA GGCCCATTG ATA CAATGAACC GCCTTTTCCCATTGG TERM 3846 3481792 - 3481775 - R 89 -7.1 -4.96996 | GGGAAATAAAACAAA TGGTTAT AAAC ATAACCA GAGAGGAAATTGTCA TERM 3847 3481810 - 3481843 + r 95 -12.5 -3.35046 | overlap 3481808 3481811 GAGGAAATTGTCAGT TCTGCTGTCTGGGTA CAAT TACACAGGCAGCAGG TGTTTCAGAAACTAA TERM 3848 3481811 - 3481842 + r 95 -13.8 -2.60813 | overlap 3481810 3481808 AGGAAATTGTCAGTT CTGCTGTCTGGGTA CAAT TACACAGGCAGCAG GTGTTTCAGAAACTA YE3197 3482604 - 3481855 - | hypothetical protein TERM 3849 3482765 - 3482796 + r 100 -11.6 -4.37886 | opp_overlap 3482784 CACGCTGATTAGGCA CACCGTTACAGCCT AAAT AGACCGTAACGGTG TTTTGTCAGAGCTAA aglB 3484130 - 3482808 - | 6-phospho-alpha-glucosidase TERM 3850 3483116 - 3483082 - G 71 -8.7 -3.69323 | GCATCATTATCGAAA TTACTGATAGCGCCT TTATT AGGCACAATCAATAA CATGCGACGCTTGGT aglA 3485686 - 3484142 - | PTS system, alpha-glucoside-specific IIBC component YE3200 3485925 - 3486635 + | GntR family transcription regulatory protein TERM 3851 3486679 - 3486645 - T 100 -11.7 -4.82855 | gap 1, opp_overlap 3486649, overlap 3486649 3486673 GATTAAATTTAAAAA TAAAGCGACA-TTGGC GGAT GCCAAATATCGCTTTA CTGAATAGCGCCGAT TERM 3852 3486675 - 3486649 - T 95 -8.1 -4.92828 | gap 1, opp_overlap 3486649, overlap 3486645 3486673 AAATTTAAAAATAAA GCGACA-TTGGC GGAT GCCAAATATCGC TTTACTGAATAGCGC proA 3487963 - 3486704 - | gamma-glutamyl phosphate reductase TERM 3853 3486885 - 3486868 - G 73 -7.7 -4.0641 | overlap 3486879 3486883 3486884 TGGCATTGACATAAA CGGCTGA TGAA TCAACCG CGCGAACAAAATGTT TERM 3854 3487212 - 3487226 + g 71 -6.4 -4.20084 | TTACATGCACTTGGC CGCTGA ATT TTAGCG TTTTCAATGACTAAT proB 3489076 - 3487973 - | gamma-glutamyl kinase TERM 3855 3489171 - 3489223 + r 93 -13.8 -2.53519 | overlap 3489168 3489171 CACTTTGCGGATCAG C-GTCTTAATTGGCATTGCAGGTTGG GTA CAAGCCTGCAATGCCAGTTAA-ACAG GTCTATATTTATGCC TERM 3856 3489171 - 3489224 + r 77 -10.5 -3.23335 | gap 1, overlap 3489171 3489168 CACTTTGCGGATCAG CGT-CTTAATTGGCATTGCAGGTTGG GTA CAAGCCTGCAATGCCAGTTAAACAGG TCTATATTTATGCCG crl 3489633 - 3489232 - | DNA-binding transcriptional regulator Crl frsA 3490940 - 3489693 - | fermentation/respiration switch protein TERM 3857 3491049 - 3491030 - R 100 -11.4 -4.19735 | opp_overlap 3491030 3491031, overlap 3491031 GCGGGGAAAATGAAA CGCCCGGT AGGC ACCGGGCA TTTATTCCCTTCATA TERM 3858 3491030 - 3491049 + r 88 -9.2 -4.26351 | opp_overlap 3491030 3491031, overlap 3491031 GCGGGGAAAATGAAA CGCCCGGT AGGC ACCGGGCA TTTATTCCCTTCATA TERM 3859 3491048 - 3491031 - R 93 -12.7 -3.11359 | opp_overlap 3491030 3491031, overlap 3491030 CGGGGAAAATGAAAC GCCCGGT AGGC ACCGGGC ATTTATTCCCTTCAT TERM 3860 3491031 - 3491048 + r 93 -12.7 -3.15087 | opp_overlap 3491031 3491030, overlap 3491030 CGGGGAAAATGAAAC GCCCGGT AGGC ACCGGGC ATTTATTCCCTTCAT gpp 3491649 - 3491191 - | xanthine-guanine phosphoribosyltransferase TERM 3861 3493295 - 3493274 - g 73 -7.3 -4.15044 | opp_overlap 3493259 3493277 3493279 GGTTTGTTCAAGAAA CCTTATCCA GATA TGGATATGG TGTCGATTGGGCCAA pepD 3491957 - 3493417 + | aminoacyl-histidine dipeptidase TERM 3862 3493449 - 3493468 + T 100 -9.2 -5.2112 | opp_overlap 3493449 TTCAATACCAATAAT GGCGGGCC TAAT GGTTCGCC TTTTTTCATACTATT dinP 3494549 - 3493491 - | DNA polymerase IV YE3208 3495044 - 3494652 - | hypothetical protein TERM 3863 3494968 - 3494944 - G 72 -10.7 -2.56095 | overlap 3494940 GTGACAGGCAATTGA CCGGAGAGATA GAT CATCCCCCCGG CACAGACAGCATGGC TERM 3864 3495009 - 3494989 - G 75 -10.3 -3.3197 | opp_overlap 3494986 3494984 3494990, overlap 3494990 ACAGCATGGCTATAA TGGCCCGCC GAC GGCAGGCCT GATGTTGAATTTATC TERM 3865 3494990 - 3495008 + g 76 -11.6 -2.7965 | opp_overlap 3494989 3494990, overlap 3494986 3494984 CAGCATGGCTATAAT GGCCCGCC GAC GGCAGGCC TGATGTTGAATTTAT TERM 3866 3495008 - 3494990 - G 84 -13.8 -2.58861 | opp_overlap 3494990 3494986 3494984, overlap 3494989 CAGCATGGCTATAAT GGCCCGCC GAC GGCAGGCC TGATGTTGAATTTAT YE3209 3496012 - 3495044 - | hydroxy amino acid dehydratase TERM 3867 3495902 - 3495890 - G 74 -2.6 -5.08824 | TTCGCATTTAAAAAA CAGC TGTGC GCCG GTCTGCTCATTGGCA YE3210 3496647 - 3496015 - | hypothetical protein TERM 3868 3496731 - 3496717 - R 95 -7.1 -5.46657 | opp_overlap 3496711 3496717 CATCTCAATAAAAAA GCTGC GCACG GCAGC TTTTTATCATTGAAT TERM 3869 3496717 - 3496731 + r 89 -7.1 -4.98857 | opp_overlap 3496717, overlap 3496711 CATCTCAATAAAAAA GCTGC GCACG GCAGC TTTTTATCATTGAAT ddlA 3497861 - 3496761 - | D-alanine--D-alanine ligase A TERM 3870 3498143 - 3498107 - H 100 -12.5 -3.93026 | opp_overlap 3498110, overlap 3498110 AATATGGCAACCAAA TTAGCCAATAACAGAAT TGA ATTCTGTTATTGGCTTT TTTTCCATTTTTGTC TERM 3871 3498110 - 3498140 + H 100 -18.6 -5.63857 | opp_overlap 3498110 3498107 ATGGCAACCAAATTA GCCAATAACAGAAT TGA ATTCTGTTATTGGC TTTTTTTCCATTTTT TERM 3872 3498140 - 3498110 - H 100 -18.6 -3.02434 | opp_overlap 3498110, overlap 3498107 ATGGCAACCAAATTA GCCAATAACAGAAT TGA ATTCTGTTATTGGC TTTTTTTCCATTTTT YE3212 3498434 - 3499222 + | hypothetical protein TERM 3873 3499334 - 3499294 - T 100 -9.9 -5.74122 | opp_overlap 3499299 TAGGATATAAAAAAA TAAAACCCCTCGCTAAA ATCCTTA TTGATCGAGGGGTTTTA CATGCGGAAAGGCAA YE3213 3499589 - 3499362 - | hypothetical protein apbE 3500624 - 3499602 - | thiamine biosynthesis lipoprotein nqr6 3501887 - 3500664 - | Na(+)-translocating NADH-quinone reductase subunit F nqr5 3502499 - 3501903 - | Na(+)-translocating NADH-quinone reductase subunit E nqr4 3503135 - 3502506 - | Na(+)-translocating NADH-quinone reductase subunit D nqr3 3503928 - 3503128 - | Na(+)-translocating NADH-quinone reductase subunit C nqr2 3505159 - 3503918 - | Na(+)-translocating NADH-quinone reductase subunit B nqr1 3506506 - 3505163 - | Na(+)-translocating NADH-quinone reductase subunit A yafK 3506998 - 3507747 + | hypothetical protein YE3222 3508485 - 3507721 - | hypothetical protein TERM 3874 3507758 - 3507779 + g 73 -8.7 -3.91798 | opp_overlap 3507758 AATAATGCAAACTCA CCTGGTGCA ATTT TGTGCCAGG TTTCATTACCGGTTA gmhA 3509168 - 3508587 - | phosphoheptose isomerase fadE 3509424 - 3511871 + | acyl-CoA dehydrogenase TERM 3875 3511933 - 3511916 - T 75 -8.4 -3.83205 | ACTCTCTATACCAAA GCCTCC CTTACC GGAGGC TCAGACTGCTGACAA TERM 3876 3512102 - 3512049 - T 72 -9.6 -3.17622 | overlap 3512047 CAGTGCGACAACATA GGTTGGTCATTAACCTCAGCCTCC CTTACC GGAGGCTCAGACTGCTGACAAACC TCGATAACTCGATCT TERM 3877 3512252 - 3512269 + T 100 -8.4 -5.36441 | TTGTCATTAACCTCA GCCTCC CTTATC GGAGGC TTTTTTATCTGCCAG rcsC 3514108 - 3512249 - | putative accessory processing protein TERM 3878 3512576 - 3512554 - G 79 -10.6 -3.7282 | opp_overlap 3512552 GCACGGTATCAACAA TCCCATTGGT ATT ACCAAAGGGA AATGGGTTGATAAAC TERM 3879 3513553 - 3513535 - G 71 -4.4 -4.66318 | overlap 3513537 ACCATCGCAATAAAA GCTCACGC TTT GCGTGCCC CACTGTGCTGGGTAA rcsA 3520372 - 3514175 - | putative adhesin rcsB 3522206 - 3520413 - | putative surface-exposed protein mtnK 3524162 - 3522963 - | methylthioribose kinase TERM 3880 3523067 - 3523051 - G 73 -8.7 -3.84451 | CGCCCCAAACTCAAA GCATGCC GCT GACATGC CCGGCGCATCTCATC TERM 3881 3524522 - 3524503 - g 73 -10.6 -3.14647 | opp_overlap 3524499 3524507 ATTGAGCATATTCAA GCGCTGCG CGTA CGCGGCGC GCCATTGATTGGCTT TERM 3882 3525275 - 3525294 + G 79 -10 -3.92324 | gap 1, overlap 3525265 GGGCACCTGCGAATG CGCCGGTGT ATA AC-CCGGCG TTTGATGTTACCCCA mntA 3524356 - 3525396 + | aldose-ketose isomerase mntD 3526080 - 3525538 - | dioxygenase mntC 3526766 - 3526077 - | bifunctional enolase-phosphatase TERM 3883 3526241 - 3526227 - G 77 -4.2 -5.02502 | overlap 3526229 GATATCAGATAAAAA CAGCAA TGC TTGCGG GGCAATAGCCAGCTG mntB 3527452 - 3526763 - | hypothetical protein TERM 3884 3526921 - 3526908 - G 73 -2.4 -5.1675 | overlap 3526919 CCACGGACCAAAAAA CCAT AACGTA ATGG ATGATTATCAGCCAG TERM 3885 3528647 - 3528663 + G 76 -8.7 -3.98842 | CTCACCGAACACGTA GGTGTCG CCG CGATACC TTTATCAGTATTCTG mntE 3527612 - 3528772 + | putative aminotransferase YE3235 3528760 - 3529530 + | hypothetical protein TERM 3886 3529738 - 3529753 + F 89 -11.8 -3.32844 | opp_overlap 3529715 3529738 GCCTCAACCGCCAAA GGGGGC AGCG GCCCCC TTGTGGAATCCCGCG TERM 3887 3529753 - 3529738 - f 93 -11.8 -3.60792 | opp_overlap 3529738, overlap 3529715 GCCTCAACCGCCAAA GGGGGC AGCG GCCCCC TTGTGGAATCCCGCG TERM 3888 3530408 - 3530396 - f 76 -2.6 -5.39721 | overlap 3530404 CTATGACACAAAAAA CCGA AAACG CCGG TTTAAGCCCAGCATT YE3237 3530422 - 3531585 + | sugar transporter YE3238 3531718 - 3532491 + | putative amino acid transporter YE3239 3532488 - 3532829 + | hypothetical protein emrR 3533001 - 3533513 + | transcriptional repressor MprA TERM 3889 3533518 - 3533494 - f 70 -7.9 -3.72576 | overlap 3533500 CGCGTTTGGACCAAA TGGAAATACCG GAA CAGTAATTCCA CCGGTTCTATCCAGA YE3241 3533561 - 3535027 + | outer membrane efflux protein TERM 3890 3535640 - 3535628 - g 73 -5.5 -4.57837 | ACACCTTTGGAAAAA CAACC GGC GGTCG AACAAGCTGCGGCCA emrA 3535043 - 3536215 + | multidrug resistance protein A emrB 3536255 - 3537787 + | multidrug resistance protein B TERM 3891 3537835 - 3537811 - T 100 -13.6 -5.1356 | opp_overlap 3537811 GCTGAGCAACAAAAA GGGCGCTGAC TTATC ATCAGCGCCC TTTTTATTTTTATAT TERM 3892 3537811 - 3537835 + T 100 -12.9 -5.71295 | opp_overlap 3537811 GCTGAGCAACAAAAA GGGCGCTGA CTTATCA TCAGCGCCC TTTTTATTTTTATAT YE3244 3538985 - 3537879 - | putative methyltransferase TERM 3893 3538867 - 3538881 + g 71 -4.9 -4.58283 | overlap 3538877 3538878 CCCGGACGACCTTTG CCTGC CGGAC GCGGG TTTTTACCCCGGTTA TERM 3894 3539013 - 3539001 - H 77 -10.5 -3.14132 | opp_overlap 3538997 TGTCTTCTCCACCAA CGCGC AGG GCGCG AAGATTACCTGATGT TERM 3895 3539279 - 3539295 + G 70 -7.9 -3.85603 | opp_overlap 3539279 3539278 ATGACGGCGCTAAAT GTGGGCG CTG CGGCCAC TCTTTATTTGATGGC trxC 3539206 - 3539646 + | thioredoxin 2 TERM 3896 3539700 - 3539731 + F 100 -9.4 -5.86976 | overlap 3539703 3539704 ACTACCCGATAAAGC CCATGCCCTGACAG TTTT CTGTTGGGGCGTTG TTTTTTCTTTTATGG TERM 3897 3539703 - 3539728 + F 100 -9.7 -4.94109 | overlap 3539700 3539704 ACCCGATAAAGCCCA TGCCCTGACAG TTTT CTGTTGGGGCG TTGTTTTTTCTTTTA TERM 3898 3539704 - 3539727 + F 83 -11 -3.52805 | overlap 3539703 3539700 CCCGATAAAGCCCAT GCCCTGACAG TTTT CTGTTGGGGC GTTGTTTTTTCTTTT YE3246 3539801 - 3540550 + | hypothetical protein TERM 3899 3541073 - 3541044 - g 74 -2.8 -5.14563 | overlap 3541045 GTTCCTATCAAAAAA GGCCGACTGG CGTTTATCTC CCAGTCAGCG GCGGTAGCTAACACC TERM 3900 3541640 - 3541654 + G 74 -10 -3.54459 | CCTGCGAGATGATGC TAGCGC CGA GCGCTA TTTAGCGGCGCTTAA yfiQ 3540603 - 3543245 + | putative acetyltransferase TERM 3901 3544078 - 3544061 - g 80 -6.3 -4.8048 | TCCCGAGATCAAAAA CGAAACC CGGC AGTTTCG CTCATCACTGCGAGA pssA 3543420 - 3544778 + | phosphatidylserine synthase TERM 3902 3545353 - 3545325 - g 75 -3.7 -5.08824 | CGCCTACTTAAAAAA GCTGCGTGCCTTG ATT CAGGAGAAGCAGC GGAAAAAACGCGAAT YE3249 3544855 - 3545370 + | insertion element IS1664 protein TERM 3903 3546201 - 3546156 - g 90 -9.2 -4.59376 | gap 1, overlap 3546161 3546162 AGGATCAAAGTAAAA TTAA-ACGGCCTGAGTCCGGT GCAGT ACCGAAATCAGGCCATGTCAA CCGCCAGGAAAAGTG TERM 3904 3546195 - 3546161 - g 100 -12.9 -4.29472 | overlap 3546156 3546162 CAAAGTAAAATTAAA CGGCCTGAGTCCGGT GCAGT ACCGAAATCAGGCCA TGTCAACCGCCAGGA TERM 3905 3546194 - 3546162 - g 90 -14.2 -3.16056 | overlap 3546161 3546156 AAAGTAAAATTAAAC GGCCTGAGTCCGGT GCAGT ACCGAAATCAGGCC ATGTCAACCGCCAGG YE3250 3545406 - 3546224 + | putative transposase for IS1664 element YE3251 3546281 - 3546622 + | hypothetical protein TERM 3906 3546705 - 3546683 - T 100 -7.6 -5.86976 | opp_overlap 3546683 3546694 CCATAAAACAAAAAA GGCCACCCAC CGG GAGGGTAACC TTCTCTTTTATTTGG TERM 3907 3546694 - 3546710 + T 84 -6.5 -4.93288 | opp_overlap 3546683, overlap 3546683 AAAAGGCCACCCACC GGGAGGG TAA CCTTCTC TTTTATTTGGCTGTT TERM 3908 3546818 - 3546784 - T 77 -10.7 -2.88249 | opp_overlap 3546784, overlap 3546791 TATATTTCCCACATA GCAAAAACCCCACGC TTTTG GCATGGGGTCTCGGC TTGATTTGATGCCTG TERM 3909 3546811 - 3546791 - T 100 -10.4 -4.84527 | opp_overlap 3546784, overlap 3546784 CCCACATAGCAAAAA CCCCACGC TTTTG GCATGGGG TCTCGGCTTGATTTG TERM 3910 3547058 - 3547048 - T 82 -6.8 -4.78848 | opp_overlap 3547048 CTCTCAAATACAAAA CACC TTT GGTG TTGTAAGGTTAAGCC TERM 3911 3548170 - 3548181 + T 74 -4.4 -5.06816 | CCACTTTCGTGTTTG CACA GTGC TGTG TTTTTATTAAACAGT TERM 3912 3548677 - 3548695 + T 82 -10.3 -3.57798 | overlap 3548670 CTTGGTCTTCCGGCG TGCGGGT TTTTC ACCCGCA TTATCGTTACTTATG TERM 3913 3552401 - 3552416 + T 78 -9 -3.88731 | TTTGATATTGCTTCT GCCTGT CGAA ACAGGC TTTGATATCGTCTTG YE3252 3553272 - 3552706 - | D,D-heptose 1,7-bisphosphate phosphatase metN 3553459 - 3554490 + | DL-methionine transporter ATP-binding subunit YE3254 3554483 - 3555136 + | DL-methionine transporter permease subunit metQ 3555331 - 3556146 + | DL-methionine transporter substrate-binding subunit TERM 3914 3556166 - 3556191 + F 71 -8.5 -3.47361 | gap 1, opp_overlap 3556173 3556187, overlap 3556164 CAGTGGGCCATTTTG CTGAATATTAGG TTT CCTAA-ATTCAG TGTTTACTAAATATA TERM 3915 3556236 - 3556207 - f 81 -10.7 -3.29704 | opp_overlap 3556210 3556213, overlap 3556205 3556203 TGTTTACTAAATATA TTGCAAGACGGGC AACA GCCCGTCTTGTTA TTTGCATAATAGATT TERM 3916 3556210 - 3556233 + F 100 -16.8 -3.97674 | opp_overlap 3556207 3556205 3556203, overlap 3556213 TTACTAAATATATTG CAAGACGGGC AACA GCCCGTCTTG TTATTTGCATAATAG TERM 3917 3556213 - 3556230 + F 100 -12.7 -4.10744 | opp_overlap 3556207 3556205 3556203, overlap 3556210 CTAAATATATTGCAA GACGGGC AACA GCCCGTC TTGTTATTTGCATAA rcsF 3556294 - 3556701 + | outer membrane lipoprotein TERM 3918 3556774 - 3556754 - g 70 -2.4 -4.99043 | opp_overlap 3556749 3556754, overlap 3556756 GCCCTATAAAGAAAA GTTTGCCG TACCG CGGCAGCC TGGTCTGATTGAAGA YE3257 3556698 - 3557405 + | hypothetical protein TERM 3919 3559170 - 3559156 - g 75 -3.4 -5.09762 | overlap 3559157 AGTGGAATACAAAAA CCGCCG TGC CGGTGA AAAGCAAATGATTAA drpA 3557513 - 3559231 + | prolyl-tRNA synthetase TERM 3920 3559252 - 3559279 + T 91 -4.9 -5.72254 | gap 1, opp_overlap 3559252 TATGCGTTAAAAAAA CCGCTGACTAGT GAATA ACTAC-CAGCGG TTTTTTATTATTTCA TERM 3921 3559279 - 3559252 - T 91 -7.1 -5.41143 | gap 1, opp_overlap 3559252 TATGCGTTAAAAAAA CCGCTGACTAGT GAATA ACTA-CCAGCGG TTTTTTATTATTTCA cutF 3559994 - 3559305 - | lipoprotein involved with copper homeostasis and adhesion YE3260 3560477 - 3560061 - | hypothetical protein YE3261 3561028 - 3560480 - | hypothetical protein TERM 3922 3561430 - 3561415 - g 78 -11.8 -3.08679 | opp_overlap 3561416 CTCCGTTAGGGAACA GGCGGC CTTT GCCGCC GCTAACTTATTGGTG YE3262 3561266 - 3561466 + | hypothetical protein YE3263 3561453 - 3561713 + | Rho-binding antiterminator TERM 3923 3561750 - 3561771 + T 100 -13.7 -4.67038 | opp_overlap 3561750 CTACACCTTTACAGA CGGGCCGCT TAAA AGTGGCCCG TTTTGCTTTTAAGGC TERM 3924 3561771 - 3561750 - T 81 -11.5 -2.89191 | opp_overlap 3561750 CTACACCTTTACAGA CGGGCCGCT TAAA AGTGGCCCG TTTTGCTTTTAAGGC YE3264 3562114 - 3561800 - | putative cytochrome tilS 3563675 - 3562290 - | tRNA(Ile)-lysidine synthetase TERM 3925 3563018 - 3563002 - G 73 -7.9 -4.08706 | opp_overlap 3563003, overlap 3563003 TGCTCAGCACACAAA CCGGCAC TGC GTGCCGT GGCTTGAGCAAAGTG TERM 3926 3563017 - 3563003 - G 78 -11.4 -3.04902 | opp_overlap 3563003, overlap 3563002 GCTCAGCACACAAAC CGGCAC TGC GTGCCG TGGCTTGAGCAAAGT TERM 3927 3563003 - 3563017 + g 75 -11.4 -2.52543 | opp_overlap 3563003 3563002 GCTCAGCACACAAAC CGGCAC TGC GTGCCG TGGCTTGAGCAAAGT TERM 3928 3563138 - 3563156 + g 76 -11.8 -2.87132 | ACTGTAATCGCTGCA CTTGAGCA TAG TGCTCAAG TGTCTCACGGGAAAA TERM 3929 3563440 - 3563456 + g 71 -7.3 -4.09243 | ATTTTCCATTGCTCA CATTGCT GCT GGCAATG TTTTACCCAACTGTC YE3266 3564075 - 3563677 - | hypothetical protein ldcC 3566230 - 3564089 - | lysine decarboxylase, constitutive TERM 3930 3566490 - 3566466 - R 100 -13.7 -5.80003 | opp_overlap 3566466 CTAATAAATAAAAAA TCCGGTACATA ATA TATGCACCGGA TTTCAATATCTAACT TERM 3931 3566466 - 3566490 + r 95 -11.5 -3.74345 | opp_overlap 3566466 CTAATAAATAAAAAA TCCGGTACATA ATA TATGCACCGGA TTTCAATATCTAACT accA 3567494 - 3566535 - | acetyl-CoA carboxylase carboxyltransferase subunit alpha TERM 3932 3567411 - 3567439 + g 71 -6.8 -4.27584 | gap 1 ATCTAATTTTTCGTC TTGAC-GGCTGAC TGCG GTCAGCGAGTCAA TTTTCGCTTCCAGCT dnaE 3571022 - 3567507 - | DNA polymerase III subunit alpha rnhB 3571696 - 3571100 - | ribonuclease HII lpxB 3572877 - 3571693 - | lipid-A-disaccharide synthase TERM 3933 3572570 - 3572612 + g 80 -6.3 -4.78107 | opp_overlap 3572591 3572592, overlap 3572592 ATACCGACAAAAACA TCCGGCGAGAGCTCACTAA AACGC TGAGTCAGCTCTTTTCGGA TTTTTAGTAATCGTG lpxA 3573669 - 3572881 - | UDP-N-acetylglucosamine acyltransferase fabZ 3574179 - 3573673 - | (3R)-hydroxymyristoyl-ACP dehydratase TERM 3934 3574214 - 3574202 - R 70 -2.7 -5.00616 | overlap 3574203 TTCCTGTCTAAAAAA CTGAT GCT ATCAA CAACACGGCCTGCAC lpxD 3575485 - 3574463 - | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase ompH 3575986 - 3575489 - | periplasmic chaperone TERM 3935 3575607 - 3575625 + g 73 -4.6 -4.6759 | opp_overlap 3575607 ACAGATTTCACAGCA TCCTGA ATACGGC TCAGGA TTTTGTTACGCTCTT TERM 3936 3575766 - 3575778 + g 78 -7.7 -4.3467 | GTAGAACCGTCACGT TGCAG TTT CTGCA TTTTAGTCTGCAGAT TERM 3937 3576091 - 3576053 - R 72 -9.7 -2.836 | opp_overlap 3576054, overlap 3576061 TTAATACTGAATAAT GCCTAAAATAGCGCCAA ACTTA TTAGCGCTACCTTAGGT TATTTCAACTACCAG TERM 3938 3576083 - 3576061 - R 79 -8.5 -4.16921 | opp_overlap 3576054, overlap 3576053 GAATAATGCCTAAAA TAGCGCCAA ACTTA TTAGCGCTA CCTTAGGTTATTTCA YE3276 3578528 - 3576144 - | outer membrane protein assembly factor YaeT TERM 3939 3578168 - 3578190 + g 71 -9 -3.51329 | opp_overlap 3578168 CCAAGGCTTCACCAA CCCGGACGCC AGA GGCTTCCAGG TTCTGCTTAAGCATG TERM 3940 3578190 - 3578168 - G 76 -11.2 -3.15579 | opp_overlap 3578168 CCAAGGCTTCACCAA CCCGGACGCC AGA GGCTTCCAGG TTCTGCTTAAGCATG YE3277 3579920 - 3578565 - | zinc metallopeptidase cdsA 3580797 - 3579949 - | CDP-diglyceride synthase TERM 3941 3580623 - 3580609 - G 80 -6.4 -4.79223 | TGATATCAGTAAAAA GCCACA AAG TATGGC CAACCAAATACGCTG rth 3581565 - 3580807 - | undecaprenyl pyrophosphate synthetase TERM 3942 3581635 - 3581654 + r 73 -8.6 -3.67597 | gap 1, opp_overlap 3581635 AAGCGCACAAAAAAA GCCGTGTAC CAA GT-CACGGC TTCTTAAGTGACAGC TERM 3943 3581654 - 3581635 - R 100 -8.6 -5.63504 | gap 1, opp_overlap 3581635 AAGCGCACAAAAAAA GCCGTGTAC CAA GT-CACGGC TTCTTAAGTGACAGC TERM 3944 3581778 - 3581788 + r 76 -6.8 -4.56736 | opp_overlap 3581778 CAAATTCCCACATCA GCCT ACG AGGC TTTTAATTATTCAAT b0173 3582987 - 3581791 - | 1-deoxy-D-xylulose 5-phosphate reductoisomerase TERM 3945 3582604 - 3582588 - G 78 -5.1 -4.87665 | overlap 3582590 CTTCATCCATAAAAA GCTTACC ACA GGTAATC AGCGACTCTTTGTTA TERM 3946 3583277 - 3583260 - R 82 -10.5 -3.70007 | opp_overlap 3583260, overlap 3583256 ACCAGCGAAAACTAA GCGCCGC CTAA GCGACGC TATAATAGTTGTCGG frr 3583856 - 3583299 - | ribosome recycling factor pyrH 3584735 - 3583989 - | uridylate kinase TERM 3947 3584355 - 3584342 - G 74 -6.7 -4.47707 | CCGCAGCAAAAATAA CCACA CGGT TGTGG CGCAGCAGGCTGATT TERM 3948 3584997 - 3584964 - R 100 -14.7 -2.54896 | opp_overlap 3584969, overlap 3584969 CGGGTATCGAATGGA TAAAATGGAACCGCC TGGT GGCGGCTCCATTTTT AGCATTAAGACTGTT TERM 3949 3584992 - 3584969 - R 100 -14.6 -4.47551 | opp_overlap 3584969, overlap 3584964 ATCGAATGGATAAAA TGGAACCGCC TGGT GGCGGCTCCA TTTTTAGCATTAAGA TERM 3950 3584969 - 3584992 + r 100 -12.4 -4.66833 | opp_overlap 3584969 3584964 ATCGAATGGATAAAA TGGAACCGCC TGGT GGCGGCTCCA TTTTTAGCATTAAGA tsf 3585859 - 3585002 - | elongation factor Ts TERM 3951 3585933 - 3585913 - R 100 -14 -3.74792 | CATTAGATACGCAAA GGGGGCCT ATAAA AGGCCCCC TAACCAACATATTTC TERM 3952 3585995 - 3586007 + r 76 -7.7 -4.20918 | CTGACTTATTATTCA GCTTC TAC GAAGC TTTCTTCCGCTTGAA rpsB 3586713 - 3585988 - | 30S ribosomal protein S2 ampM 3587074 - 3588033 + | methionine aminopeptidase TERM 3953 3588043 - 3588058 + F 100 -11.8 -5.26316 | opp_overlap 3588043 3588037 GAGTAATAATGATAA GCCGGC AGCC GCCGGC TTTTTTATGGGCTGC TERM 3954 3588058 - 3588043 - f 93 -11.8 -3.6216 | opp_overlap 3588043, overlap 3588037 GAGTAATAATGATAA GCCGGC AGCC GCCGGC TTTTTTATGGGCTGC glnD 3588094 - 3590772 + | PII uridylyl-transferase dapD 3590890 - 3591714 + | 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase TERM 3955 3591724 - 3591744 + F 100 -8.3 -5.1925 | opp_overlap 3591724 3591722 GACTAAGATTGAAGA TAGCGGG CTAATCC CCCGCTA TTTTTTGCCTTGTGA TERM 3956 3591755 - 3591769 + F 74 -4.3 -5.00884 | CGCTATTTTTTGCCT TGTGA GTTAA TCACA TTTTTTGGCGAAAAT YE3288 3591834 - 3592223 + | hypothetical protein YE3289 3592824 - 3592375 - | flavodoxin YE3290 3593625 - 3592852 - | tRNA pseudouridine synthase C TERM 3957 3593591 - 3593552 - G 74 -10.8 -3.07816 | opp_overlap 3593566, overlap 3593566 TTGCTATCCAGCCAA CTGCGGTGAACTAACCAG CCGG CTGGTTTATTTACCGCAA CTATATGTTCGTCTT TERM 3958 3593566 - 3593577 + g 72 -5.8 -4.41348 | opp_overlap 3593566 3593552 ACTGCGGTGAACTAA CCAG CCGG CTGG TTTATTTACCGCAAC YE3291 3593957 - 3593625 - | hypothetical protein TERM 3959 3594118 - 3594150 + r 100 -16.5 -3.63744 | opp_overlap 3594123, overlap 3594123 GACACTTTTCAGCCT TAAAACGCCTGATGA ACT TCATCGGGCGTTTTG TATTTTAACGACAGA TERM 3960 3594123 - 3594145 + r 100 -14.2 -4.89567 | opp_overlap 3594123, overlap 3594118 TTTTCAGCCTTAAAA CGCCTGATGA ACT TCATCGGGCG TTTTGTATTTTAACG TERM 3961 3594145 - 3594123 - R 100 -12 -4.11216 | opp_overlap 3594123 3594118 TTTTCAGCCTTAAAA CGCCTGATGA ACT TCATCGGGCG TTTTGTATTTTAACG YE3292 3594914 - 3594117 - | putative transposase for insertion element IS1669 YE3293 3595246 - 3594932 - | IS1669 hypothetical protein TERM 3962 3595397 - 3595424 + r 76 -9.9 -3.35849 | opp_overlap 3595399, overlap 3595395 3595391 3595399 TCATGTGGATAAAAA AAGGGGTACTG TTTTAC CAGTACCCCTC TATTCGTTTCATAGC TERM 3963 3595399 - 3595422 + r 95 -12.5 -3.24202 | opp_overlap 3595399, overlap 3595397 3595395 3595391 ATGTGGATAAAAAAA GGGGTACTG TTTTAC CAGTACCCC TCTATTCGTTTCATA TERM 3964 3595422 - 3595399 - R 100 -12.5 -5.61596 | opp_overlap 3595397 3595395 3595391 3595399 ATGTGGATAAAAAAA GGGGTACTG TTTTAC CAGTACCCC TCTATTCGTTTCATA TERM 3965 3595899 - 3595869 - R 100 -12.7 -3.84279 | opp_overlap 3595873 3595882, overlap 3595873 ATAAAAGGAATAGAA GTGATGTCTCACA GCTCG TGTGAGACATCTC TCACACGAGCTGTGC TERM 3966 3595873 - 3595895 + r 77 -10.7 -2.87211 | opp_overlap 3595869 3595873, overlap 3595882 AAGGAATAGAAGTGA TGTCTCACA GCTCG TGTGAGACA TCTCTCACACGAGCT TERM 3967 3595919 - 3595873 - R 80 -11.7 -2.6737 | gap 1, opp_overlap 3595873 3595882, overlap 3595869 AAGGAATAGAAGTGA TGTC-TCACAGCTCGTGTGAGA CATC TCTCACACGAGCTGTGCTGGGA TGGGCAATAATCTTA TERM 3968 3595882 - 3595909 + r 100 -18.6 -2.79796 | opp_overlap 3595869 3595873, overlap 3595873 AAGTGATGTCTCACA GCTCGTGTGAGA CATC TCTCACACGAGC TGTGCTGGGATGGGC syd 3596489 - 3595938 - | SecY interacting protein Syd TERM 3969 3596338 - 3596326 - G 75 -5.5 -4.71426 | GCTTCACCAACAAAA GGCTG CGG CAACC AAAACACCTGATTAT queF 3596621 - 3597466 + | 7-cyano-7-deazaguanine reductase TERM 3970 3598063 - 3598075 + G 78 -7.7 -4.43272 | AAGCTCCAACCATTT GACCA ATT TGGTC TTTTCAATTTTGCGT TERM 3971 3598713 - 3598696 - g 71 -2.6 -4.87133 | ATTGGTGAAAGAAAA TCGCCG TAATAC CGGTGA CGCTTATAGTTTCAA YE3296 3597680 - 3599044 + | hypothetical protein TERM 3972 3599787 - 3599757 - g 71 -4.1 -4.7373 | opp_overlap 3599757, overlap 3599780 3599781 GTATTGGAGCAAAAA CTGCCGCGCT-GTTA TTG CAACAAGC-CAGCAG CCTGGAGCAACTCTA xni 3599192 - 3599947 + | exonuclease IX TERM 3973 3599985 - 3599963 - T 100 -9.9 -5.32882 | gap 1, overlap 3599967 TATCAGCATAAAAAA CTAAGGGGCC AATT GGCCCCTT-G CAGACTGCTGACAAA TERM 3974 3599982 - 3599967 - T 100 -11.8 -4.0014 | overlap 3599963 AGCATAAAAAACTAA GGGGCC AATT GGCCCC TTGCAGACTGCTGAC TERM 3975 3600154 - 3600098 - T 100 -14.6 -4.36914 | gap 1, opp_overlap 3600119, overlap 3600099 3600100 CTCGGTGCGACAAAA TGGGTTTGTCATTACCCACAAGGGGCC AATT GGCCCCTTGTGGGTAAT-ACATACAGG TACCGGTCTATCACC TERM 3976 3600153 - 3600099 - T 100 -18.1 -3.21934 | gap 1, opp_overlap 3600119, overlap 3600098 3600100 TCGGTGCGACAAAAT GGGTTTGTCATTACCCACAAGGGGCC AATT GGCCCCTTGTGGGTAAT-ACATACAG GTACCGGTCTATCAC TERM 3977 3600152 - 3600100 - T 100 -21.6 -2.52946 | gap 1, opp_overlap 3600119, overlap 3600099 3600098 CGGTGCGACAAAATG GGTTTGTCATTACCCACAAGGGGCC AATT GGCCCCTTGTGGGTAAT-ACATACA GGTACCGGTCTATCA TERM 3978 3600119 - 3600134 + T 89 -11.8 -3.37975 | opp_overlap 3600100 3600099 3600098 TGTCATTACCCACAA GGGGCC AATT GGCCCC TTGTGGGTAATACAT YE3298 3601281 - 3600175 - | putative RNA 2'-O-ribose methyltransferase YE3299 3601669 - 3601274 - | hypothetical protein TERM 3979 3601641 - 3601629 - G 80 -2.6 -5.47431 | GCAACATAGAAAAAA CCGC TCAGG GCAG CAAATATCAGCATTA gcvA 3602626 - 3601709 - | DNA-binding transcriptional activator GcvA TERM 3980 3601747 - 3601785 + g 71 -7.5 -4.12198 | gap 1 GCTTTTCCTGCTCGC TAGCCG-CTCTTGCCAGT ATCC ACTGACGAAAGGCGGCTA TTTTACCCAGTTCTG TERM 3981 3602859 - 3602875 + r 100 -7.3 -5.86332 | opp_overlap 3602861, overlap 3602861 CTGGTGTGCCAGACA TAGTAGC TAA GCTACTG TTTTTTTTCACTTCC TERM 3982 3602861 - 3602873 + r 82 -7.7 -4.56715 | opp_overlap 3602861, overlap 3602859 GGTGTGCCAGACATA GTAGC TAA GCTAC TGTTTTTTTTCACTT TERM 3983 3602929 - 3602949 + r 100 -11.1 -6.10489 | TAGTGATTTTATGCA GCACCGCTA TTT TCGCGGTGC TTTTTTTTTGGCCTT YE3302 3603329 - 3603108 - | lipoprotein TERM 3984 3604248 - 3604236 - g 73 -4.8 -4.66535 | overlap 3604238 AACTGCTAAAAGAAA TGCC CGCCT GGCA AGGTGGCGGTAAAAT YE3303 3603470 - 3604717 + | cysteine sulfinate desulfinase YE3304 3604737 - 3605177 + | hypothetical protein TERM 3985 3605175 - 3605212 + T 73 -5.5 -4.68384 | gap 1, overlap 3605196 GCTAAATATGTGCAA TGATGGCTATTGCC-CCT GAC GGGCGGCTTTCGCCATCA TTTTCTTCAATGCAT YE3305 3605990 - 3605181 - | hypothetical protein TERM 3986 3606067 - 3606052 - R 100 -11.8 -4.73094 | AATACGAATACAAAA GCGGCC AATT GGCCGC CTGAGAAAGAGTAGA mltA 3607277 - 3606105 - | murein transglycosylase A TERM 3987 3607911 - 3607924 + r 100 -8.1 -6.02919 | opp_overlap 3607911 CATATCGCCATCAGA CACCC TTAA GGGTG TTTTTTTGTTTCTGG YE3307 3609345 - 3608095 - | N-acetylmuramoyl-L-alanine amidase AmiC precursor TERM 3988 3608828 - 3608850 + g 74 -6.3 -4.39277 | opp_overlap 3608835, overlap 3608802 TTGGGTGCCTCAGCA GGTAAAGTG CGTTC CACATTACC TTTATTATAATCTTC TERM 3989 3609661 - 3609699 + G 75 -6 -4.5265 | opp_overlap 3609640, overlap 3609694 CGCGGCAAGACATTT GTTGTCATGCTGGGTGGC GAG GCGATTGAGCATGAAAAC TTTTCTAGTATCGTT argA 3609580 - 3610905 + | N-acetylglutamate synthase TERM 3990 3610906 - 3610930 + T 70 -7.2 -3.74381 | gap 1, overlap 3610904 3610908 CTGGCAGATTTGTAA TCTGAAGGGGT ATTC GCCCCTTC-GA TATTTTCACTTCAAT RecD 3612837 - 3610936 - | exonuclease V subunit alpha TERM 3991 3612314 - 3612293 - G 79 -10.9 -3.44924 | gap 1, opp_overlap 3612299, overlap 3612291 GAAATCACGGAAATA CGGCGGGTAG CCG CTACC-GCCG CGGCGACTTTTTGCC TERM 3992 3612299 - 3612321 + g 75 -6.2 -4.59773 | opp_overlap 3612293 3612291, overlap 3612316 3612316 ACGGAAATACGGCGG GTAGCCGC TACCGCC GCGGCGAC TTTTTGCCAGTCGAC RecB 3616463 - 3612834 - | exonuclease V subunit beta TERM 3993 3614513 - 3614475 - G 72 -10.8 -2.61264 | opp_overlap 3614477, overlap 3614474 GCGCTGAGCCATAAT CTCCCGCAGCACCGGGAG CAC CCCACGGCGCTGCCAGTG TTGGCGATAACCATC TERM 3994 3615549 - 3615561 + g 83 -4.7 -5.25735 | overlap 3615548 GAAGACATCGTGCTG GGGAG CCT CACCC TTTTTGGTTTTTTCA ptr 3619351 - 3616460 - | protease III precursor TERM 3995 3618243 - 3618232 - G 70 -2.2 -4.88407 | overlap 3618234 TGATGTAATCAAAAA TGGC CGCT ACCA CGACATCCCGATTAG TERM 3996 3619045 - 3619029 - G 71 -2.9 -4.94222 | overlap 3619030 3619032 AAGAATTCAGAAAAA CTACCTG GCT CAGGAAA ACGCTTAGACCCCAT recC 3622822 - 3619451 - | exonuclease V subunit gamma TERM 3997 3620292 - 3620280 - G 75 -3.3 -5.03314 | overlap 3620281 CGGAGTTGGAAAAAA GCCCT CAC AGGGT GGCGATAGAAGCGGA YE3313 3623359 - 3622973 - | hypothetical protein YE3314 3623817 - 3623350 - | hypothetical protein YE3315 3624365 - 3623814 - | hypothetical protein YE3316 3624964 - 3624428 - | hypothetical protein TERM 3998 3624604 - 3624579 - G 74 -4.1 -4.85599 | overlap 3624580 3624583 CTGATGCCATAAAAA CCAATTTCTTT ATTT AAAGAAATCGT AATAGAAACATCAGG TERM 3999 3624883 - 3624904 + g 91 -7.3 -5.2112 | TGACTAATAGCAGTT CAATAAGGC TAAT GCCTTTTTG TTTTTTAATAATATT TERM 4000 3625070 - 3625084 + r 70 -2.7 -5.03314 | opp_overlap 3625067 3625068, overlap 3625068 ATACCAATAAAGGTG CGGCG CGCTT CGCAG TTTTTTGCCAATAGA TERM 4001 3625188 - 3625169 - R 100 -15 -2.8805 | ATTAGTGGGTATATA CCGGAGCC AAAC GGCTCCGG TAAAACATCAGATAG thyA 3625990 - 3625196 - | thymidylate synthase lgt 3626869 - 3625997 - | prolipoprotein diacylglyceryl transferase ptsP 3629243 - 3626997 - | fused phosphoenolpyruvate-protein phosphotransferase PtsP/GAF domain-containing protein TERM 4002 3628727 - 3628738 + g 71 -7.2 -3.9777 | GTGCCGCAGCGAGTG CGCG GATC CGCG TTTGTCGGTATTGGC YE3320 3629783 - 3629256 - | dinucleoside polyphosphate hydrolase TERM 4003 3629643 - 3629661 + g 85 -11 -3.87869 | ACGATACATTGCCTG CTCTGGTG TTT CACCAGGG TTTATCCCCCCTTGA YE3321 3630027 - 3629809 - | hypothetical protein TERM 4004 3630223 - 3630212 - H 78 -2.2 -5.4477 | opp_overlap 3630213, overlap 3630213 AAACGCGCAAAAAAA CCTG CCGT CAAG GCTGTAAATTGAACC mutH 3630481 - 3631167 + | DNA mismatch repair protein YE3323 3631264 - 3631980 + | putative integral membrane protein TERM 4005 3631989 - 3632010 + F 70 -7.9 -3.63589 | opp_overlap 3631988 3631987, overlap 3631986 3631990 AAAATAAAAATATCG TGGGTGCGA TTCG TCGCGCCCC TTTCCCACTATTTTC TERM 4006 3631990 - 3632009 + F 81 -11.4 -2.77431 | opp_overlap 3631988 3631987, overlap 3631986 3631989 AAATAAAAATATCGT GGGTGCGA TTCG TCGCGCCC CTTTCCCACTATTTT TERM 4007 3632476 - 3632457 - g 74 -2.8 -5.09225 | gap 1, overlap 3632459 ACTGGATCGAAAAAA CATCC-GTG TTG CACTGGAAG ATAGCCTCCGACGTC tas 3632131 - 3633171 + | putative aldo-keto reductase TERM 4008 3633212 - 3633197 - f 100 -11.8 -4.1466 | ATTCAATCGCCAAAA GGCCGC TTAG GCGGCC TCAGACTGCTGACAA TERM 4009 3634015 - 3633990 - g 80 -7.5 -4.57569 | opp_overlap 3633995 3634008, overlap 3633995 GCAGTTGGGCAAAAA CACAACCCGCC TGCC AGCGGGTCTTG AAAGTCCCTGGTGTG TERM 4010 3634010 - 3633995 - g 76 -8.2 -4.07746 | opp_overlap 3633995 3634008, overlap 3633990 TGGGCAAAAACACAA CCCGCC TGCC AGCGGG TCTTGAAAGTCCCTG YE3325 3633371 - 3634390 + | putative transposase for IS1667 TERM 4011 3634418 - 3634369 - T 100 -17.5 -3.13299 | gap 1, overlap 3634374 TCATCATACGGAATA TCGAACCTTATCCGCGGTTTGAGA TAA TCTCAAAC-ACGGACAAGGCTCAA GAAAAAAAGTGAATA TERM 4012 3634413 - 3634374 - T 100 -16 -3.19789 | gap 1, overlap 3634369 ATACGGAATATCGAA CCTTATCCGCGGTTTGAGA TAA TCTCAAAC-ACGGACAAGG CTCAAGAAAAAAAGT ygeD 3636058 - 3634844 - | hypothetical protein TERM 4013 3634996 - 3635015 + g 73 -7.8 -4.07885 | opp_overlap 3634994 3634996 CCAGCATCAGCAACA TCGCGGTG TTTT CACCGAGA TTTTGCACCGCAATG TERM 4014 3636031 - 3636004 - G 71 -9.2 -3.58905 | opp_overlap 3636004 ACTGCGCACATAGAA CCGCTATCATCC CTCT GGATAACAACGG CTTATCTGCTAATGC aas 3638211 - 3636055 - | bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase TERM 4015 3638331 - 3638314 - R 100 -11.3 -6.32017 | AACAAATAAAAAAAA CCTACGC ATCT GCGTAGG TCGGTGCAAATAAAA TERM 4016 3639384 - 3639359 - R 100 -9.7 -4.57569 | GCAGTTGGGCAAAAA CACAACCCGCC TGCC AGCGGGTCATG AAAGTCCCTGGTGTG TERM 4017 3639787 - 3639738 - R 100 -17.5 -3.13299 | gap 1, overlap 3639743 TCATCATACGGAATA TCGAACCTTATCCGCGGTTTGAGA TAA TCTCAAAC-ACGGACAAGGCTCAA GAAAAAAAGTGAATA TERM 4018 3639782 - 3639743 - R 100 -16 -3.19789 | gap 1, overlap 3639738 ATACGGAATATCGAA CCTTATCCGCGGTTTGAGA TAA TCTCAAAC-ACGGACAAGG CTCAAGAAAAAAAGT TERM 4019 3640052 - 3640036 - R 70 -9.3 -2.87931 | opp_overlap 3640037 3640050 GGGAGCGTCCATATA GGGCGCG GCT CGAGCCC CTAGGGAGGGGTTTA TERM 4020 3640050 - 3640063 + r 70 -8.1 -3.58329 | opp_overlap 3640036, overlap 3640037 AGGGCGCGGCTCGAG CCCCT AGGG AGGGG TTTACGGCGTCTTTA bisC 3642389 - 3640131 - | putative biotin sulfoxide reductas2 TERM 4021 3641233 - 3641247 + g 73 -5.6 -4.65895 | overlap 3641234 CGCGCCACCGGAATC GCCAGC CCC GCTGGA TTTTTCCCTACCGGC galR 3642679 - 3643749 + | DNA-binding transcriptional regulator GalR lysA 3645030 - 3643768 - | diaminopimelate decarboxylase lysR 3645197 - 3646150 + | DNA-binding transcriptional regulator LysR YE3334 3647307 - 3646147 - | putative sugar transport protein TERM 4022 3647283 - 3647273 - G 74 -6.8 -4.44797 | GTACCAATAGCAAAA GCAC TTA GTGC TAATGCCAGCAGCGC YE3335 3648690 - 3647794 - | LysR family transcriptional regulator TERM 4023 3649455 - 3649444 - g 74 -3 -5.09173 | CAACACTGGAAAAAA TCAA AGCA TTGA AACCCGTCACCGTAG YE3336 3648798 - 3649685 + | hypothetical protein YE3337 3649748 - 3650392 + | hypothetical protein cheD 3651938 - 3650397 - | putative methyl-accepting chemotaxis protein TERM 4024 3651831 - 3651819 - G 70 -7.7 -3.81146 | opp_overlap 3651827 GCTGGCAATTAATAA CTCCA TTC TGGAG CGATCCATTAATACT YE3339 3652598 - 3652152 - | hypothetical protein YE3340 3653266 - 3652607 - | reguatory protein YE3341 3654465 - 3653632 - | prepilin peptidase YE3342 3654905 - 3654480 - | hypothetical protein outL 3656116 - 3654920 - | general secretion pathway protein L outK 3657057 - 3656116 - | general secretion pathway protein K outJ 3657665 - 3657072 - | general secretion pathway protein J precursor outI 3658020 - 3657658 - | general secretion pathway protein I outG 3658507 - 3658058 - | general secretion pathway protein G outF 3659735 - 3658527 - | general secretion pathway protein outE 3661203 - 3659722 - | general secretion pathway protein E outD 3663170 - 3661224 - | general secretion pathway protein D TERM 4025 3662380 - 3662398 + g 91 -3.9 -5.56568 | TGTTGATGATCCAGC CTCTTTA TCATT TGAAGAG TTTTTTTCCTGATAT TERM 4026 3662987 - 3662998 + g 74 -3 -5.15682 | CTTGTACTTTTGGGT CTAT AATT ATAG TTTTATTTATGTTTT TERM 4027 3663080 - 3663058 - G 71 -7 -4.12188 | opp_overlap 3663060, overlap 3663046 3663060 TCAGCATCTCTAAAA GATGCAGAGA AGT TCTCCGCATA TCCTACTATAGGAAA TERM 4028 3663078 - 3663060 - G 76 -9.6 -3.6581 | opp_overlap 3663060, overlap 3663046 3663058 AGCATCTCTAAAAGA TGCAGAGA AGT TCTCCGCA TATCCTACTATAGGA outC 3663728 - 3663207 - | general secretion pathway protein C YE3351 3664204 - 3663788 - | hypothetical protein TERM 4029 3664264 - 3664248 - R 71 -3 -5.05606 | GTTAATAAAAATAAA TCACAC TATAG ATGTGA TAAGAGAACTAGTGA TERM 4030 3664461 - 3664500 + r 74 -4.5 -4.84642 | gap 1, opp_overlap 3664469, overlap 3664465 3664469 TTAAATAGCTCAGAA CAATGAAGTAGACATTTC CATTT GGAGTGTCTA-TTCTTTG TTTTATTCATTTCGA TERM 4031 3664465 - 3664496 + r 73 -3.9 -4.91657 | gap 1, opp_overlap 3664469, overlap 3664461 3664469 ATAGCTCAGAACAAT GAAGTAGACATTTC CATTT GGAGTGTCTA-TTC TTTGTTTTATTCATT TERM 4032 3664469 - 3664493 + r 73 -5.8 -4.51933 | opp_overlap 3664469, overlap 3664465 3664461 CTCAGAACAATGAAG TAGACATTTC CATTT GGAGTGTCTA TTCTTTGTTTTATTC YE3352 3665657 - 3664902 - | putative carbonic anhydrase YE3353 3666190 - 3665807 - | hypothetical protein TERM 4033 3666971 - 3666990 + G 74 -6.4 -4.4767 | CACGCGGCGGTATTT CTGGCTTC AGAT GAATCCAG TTTTGTCGTCGGTAC YE3354 3666293 - 3667042 + | short chain dehydrogenase TERM 4034 3667081 - 3667104 + T 74 -6.7 -4.34263 | opp_overlap 3667081 3667076 3667074 3667072 ATTAAATAGAGGCAA CACGAGTTG GGCCAG CAACCCGTG TTTGTCTTATTAAGA TERM 4035 3667128 - 3667164 + T 76 -6.8 -4.47183 | gap 1, opp_overlap 3667133, overlap 3667133 ATTAAGATGTTTGAA CAAAACGATCAAGTTGC CTGC GCAA-TTGGTCGTTTTC TTTCTTTAGCTGCTC TERM 4036 3667159 - 3667133 - T 71 -4.5 -4.63932 | gap 1, opp_overlap 3667128 3667133 GATGTTTGAACAAAA CGATCAAGTTGC CTGC GCAA-TTGGTCG TTTTCTTTCTTTAGC TERM 4037 3667133 - 3667159 + T 88 -6.7 -5.18866 | gap 1, opp_overlap 3667133, overlap 3667128 GATGTTTGAACAAAA CGATCAAGTTGC CTGC GCAA-TTGGTCG TTTTCTTTCTTTAGC YE3355 3667419 - 3667114 - | chaperone-modulator protein CbpM YE3356 3668379 - 3667426 - | curved DNA-binding protein CbpA TERM 4038 3667975 - 3667960 - G 71 -4.7 -4.56597 | TGTTTCTTCTAAAAA GATGG GTAATT CCATC TCAAGATCCTGTCCA TERM 4039 3668296 - 3668312 + g 83 -8.7 -4.48903 | GTGGTACTTACGTGC CAGCCTG CGA TAGGCTG TTTTAATCTCTTTTA YE3357 3669651 - 3668569 - | LacI-family regulatory protein TERM 4040 3669910 - 3669890 - H 95 -5.5 -5.88197 | opp_overlap 3669891 3669894, overlap 3669891 TTAAATATAAAAAAA TCAACAATA TCA TATTGTTGT GTTTTATTATCTGGA TERM 4041 3669891 - 3669909 + H 80 -9 -4.03793 | opp_overlap 3669890 3669891, overlap 3669894 TAAATATAAAAAAAT CAACAATA TCA TATTGTTG TGTTTTATTATCTGG TERM 4042 3669909 - 3669891 - H 83 -9 -4.10478 | opp_overlap 3669891 3669894, overlap 3669890 TAAATATAAAAAAAT CAACAATA TCA TATTGTTG TGTTTTATTATCTGG YE3358 3670044 - 3671351 + | putative sugar transporter TERM 4043 3672194 - 3672170 - g 74 -9.9 -3.53761 | CAATTTGGCCCTAAA TGGAGCCTCGG CTA CAGCGGCTCCA CCATGCACTACACCG YE3359 3671378 - 3673753 + | putative glucosidase TERM 4044 3673780 - 3673802 + T 100 -11.3 -4.36649 | opp_overlap 3673778, overlap 3673777 GTAGGAAATATACCG GCGGGTTCT ATTCC AGAGCCCGC TTATTTTCTCATATC YE3360 3674247 - 3673831 - | hypothetical protein TERM 4045 3674540 - 3674527 - g 77 -4.5 -4.94058 | GCAACTTAAAGAAAA CGGCA TTAT TACCG GCTATCAGGCCAATA YE3361 3674381 - 3674851 + | AsnC family transcriptional regulator TERM 4046 3674879 - 3674864 - T 73 -9 -3.48288 | opp_overlap 3674859 TAAGCCACACTATAA GGCATC AACC GATGCC TGAGGTTAATGACAA TERM 4047 3675046 - 3675061 + T 100 -9 -4.99947 | TTGTCAGCAGTCTGA GGCATC AACC GATGCC TTTTATTTACTTGCC YE3362 3676327 - 3675083 - | hypothetical protein YE3363 3676805 - 3676410 - | hypothetical protein TERM 4048 3676606 - 3676620 + g 80 -7.2 -4.63527 | TGCATCTCCCCCTGT TCAACT ACG AGTTGA TTTTTAAAATGGTCA TERM 4049 3677001 - 3677023 + r 77 -8.4 -3.93695 | TGTAATCATCGTTTG CGGGCCAT ATTCACA GTGGCCCG TTTCTCAATAATCCA arsC 3677510 - 3677085 - | arsenate reductase arsB 3678813 - 3677524 - | arsenical pump membrane protein TERM 4050 3678507 - 3678494 - G 75 -5.9 -4.51743 | TCATTAGCAAACAAA GCCGC CACA GCAGC ACCCAGCAGAACAAT arsR 3679398 - 3679048 - | DNA-binding transcriptional repressor ArsR YE3367 3680785 - 3679643 - | hypothetical protein YE3368 3681131 - 3681565 + | hypothetical protein YE3369 3681558 - 3681698 + | hypothetical protein YE3370 3682477 - 3682136 - | putative inner membrane protein YE3371 3683301 - 3682624 - | hypothetical protein TERM 4051 3683918 - 3683898 - R 78 -10.5 -3.30214 | AAGTCAGGATATTAA GACTATCGT AAG ACGACAGTC AGCAAACCTTATGAT YE3373 3685632 - 3684016 - | putative integrase TERM 4052 3685962 - 3685947 - R 100 -8.2 -4.82901 | TTTGTTTGATAAAAA GGACGC CGAA GCGCCC TAGAGGTTAATGACA TERM 4053 3686042 - 3686068 + r 72 -7.2 -3.9749 | gap 1, overlap 3686036 3686041 CCTCCCTGGGGGCTC GAG-CCGCGCC CTCCTT GGCGCGGACGC TTTACTCTTCTACCT lysS 3687693 - 3686176 - | lysyl-tRNA synthetase prfB 3688801 - 3687703 - | peptide chain release factor 2 TERM 4054 3688665 - 3688687 + g 73 -7.6 -4.0802 | CAGGTTCATTCCAGA CGTCGGGCTG TTC CAGCTCAGCG TTTACTTCTTCCAGT recJ 3690986 - 3689253 - | ssDNA exonuclease RecJ TERM 4055 3690466 - 3690439 - G 77 -6.4 -4.53303 | gap 1, opp_overlap 3690439 3690445, overlap 3690442 GATTTGGAGAGAAAA TCA-CAACCCG CCAAATT CGGGTTGATGA TAGCTTCGGCTGCTG dsbC 3691709 - 3690993 - | thiol:disulfide interchange protein DsbC TERM 4056 3691371 - 3691385 + g 71 -4.2 -4.8048 | opp_overlap 3691371 GGTGATATCAGTAAA CACGGT AAC AACGTG TTTTTCCTGTGGCGC TERM 4057 3691587 - 3691613 + g 77 -3.1 -5.18561 | gap 1, overlap 3691588 GGGAATAGGTGAGGG TTGGATAT-CGG CTTG CTGCATATCCAG TTTTTTCAATGTTTG xerD 3692657 - 3691758 - | site-specific tyrosine recombinase XerD fldB 3692763 - 3693284 + | flavodoxin FldB TERM 4058 3693312 - 3693294 - T 75 -7.4 -4.2528 | opp_overlap 3693294 CTTTAATCGAATAAA CGGGCA ACCACAG TGCCCG TTTGCTATACCCGTT TERM 4059 3693294 - 3693312 + T 70 -7.4 -3.8377 | opp_overlap 3693294 CTTTAATCGAATAAA CGGGCA ACCACAG TGCCCG TTTGCTATACCCGTT creD 3694764 - 3693343 - | hypothetical protein creC 3696283 - 3694856 - | sensory histidine kinase CreC blrA 3696992 - 3696294 - | DNA-binding response regulator CreB YE3385 3697417 - 3696992 - | hypothetical protein YE3386 3697664 - 3697398 - | hypothetical protein TERM 4060 3697747 - 3697763 + H 71 -8.7 -3.25102 | opp_overlap 3697756, overlap 3697756 CATATTCAGCACTCC GCCATAG AAT CTGTGGC TATTGTACCTCAGAT YE3387 3698059 - 3699051 + | putative global regulator TERM 4061 3699088 - 3699073 - T 91 -11.8 -3.52073 | opp_overlap 3699073 TCGGTAACACCATAA GGCCGG TTTT CCGGCC TTCTTAAAACCAACG TERM 4062 3699073 - 3699088 + T 93 -11.8 -3.61398 | opp_overlap 3699073 TCGGTAACACCATAA GGCCGG TTTT CCGGCC TTCTTAAAACCAACG TERM 4063 3699138 - 3699122 - T 71 -6.6 -4.14392 | overlap 3699132 AGACGTACAGATAAA TTGCCA TAAAG TGGCAA ACACTGCCGCCCAAC YE3388 3699677 - 3699105 - | putative hemolysin III TERM 4064 3699582 - 3699564 - G 73 -5.2 -4.62069 | CGTCGAGGCTAAAAA CAGCAGAA TAA TACTGCCG CCATACAAACTATAA TERM 4065 3699678 - 3699704 + H 72 -8.1 -3.75817 | opp_overlap 3699677 AATGCCAAACACCAC GCCAATACCAT GACTG ATGCTATTGGC TATTTCTTCTGCCCA TERM 4066 3700292 - 3700305 + G 70 -9.5 -3.13403 | overlap 3700290 ATTGTTTATGATTTG GCGGC CAGA GCCGC TATTCATGAGCAAGA YE3389 3700019 - 3700621 + | hypothetical protein TERM 4067 3700806 - 3700817 + T 71 -3 -5.03145 | TATCTCAGTCCCTTA TTCA GCCA TGAA TTTTTTGCCAAATTA YE3390 3701244 - 3700807 - | hypothetical protein TERM 4068 3701337 - 3701354 + r 73 -8.3 -3.67976 | opp_overlap 3701337 ATATAAACAGCAAAA GGGCCGC TTGC GCGACCC TTTAAGATTAATAAC TERM 4069 3701354 - 3701337 - R 100 -10.5 -4.5394 | opp_overlap 3701337 ATATAAACAGCAAAA GGGCCGC TTGC GCGACCC TTTAAGATTAATAAC gcvP 3704435 - 3701556 - | glycine dehydrogenase gcsH 3705022 - 3704636 - | glycine cleavage system protein H gcvT 3706186 - 3705089 - | glycine cleavage system aminomethyltransferase T TERM 4070 3705947 - 3705937 - G 73 -8.2 -3.86346 | opp_overlap 3705943 GCATTGCGGTATAAA GGGC TTT GCCC GGTTGGGTCAGTTTG TERM 4071 3706533 - 3706518 - R 79 -6.8 -4.62069 | opp_overlap 3706518 TTTCCACTGTAAAAA TGCGCC CAGA GGCACA TAATTAACAATTAAA visC 3707909 - 3706695 - | hypothetical protein ubiH 3709166 - 3707997 - | 2-octaprenyl-6-methoxyphenyl hydroxylase pepP 3710483 - 3709170 - | proline aminopeptidase P II YE3397 3711116 - 3710538 - | hypothetical protein TERM 4072 3710564 - 3710576 + g 75 -3.3 -5.10461 | TCGGCTTGCGTATTT CCGGT GCA GTCGG TTTTTCTTGGGTAAA YE3398 3711500 - 3711829 + | Z-ring-associated protein TERM 4073 3711859 - 3711831 - f 83 -9 -4.17556 | CACAGTTTGAATAAA TCTCTGTTGAAT GATAG ATTCAGCAGAGA GTAAAGAATTTCTCT TERM 4074 3712510 - 3712499 - g 80 -4.4 -5.31275 | opp_overlap 3712483 TGGCAGCAGAAAAAA CAGA TTTA TCTG CCGGTACTTCATCCT YE3399 3712268 - 3712864 + | putative 5-formyltetrahydrofolate cyclo-ligase-family protein TERM 4075 3712932 - 3712891 - T 100 -9 -5.42131 | opp_overlap 3712901, overlap 3712894 CAACGATATAAAAAA TAA-CAACAAACCCGGCATC AGCA GATACCGGG-TTGTCGGTTA CTATTCGCGCTACCA TERM 4076 3712928 - 3712894 - T 100 -12.3 -4.77122 | gap 1, opp_overlap 3712901, overlap 3712891 CGATATAAAAAATAA CAACAAACCCGGCATC AGCA GATACCGGG-TTGTCG GTTACTATTCGCGCT TERM 4077 3712901 - 3712922 + T 78 -10.1 -3.44792 | opp_overlap 3712894 3712891 AAAAATAACAACAAA CCCGGCATC AGCA GATACCGGG TTGTCGGTTACTATT serA 3714201 - 3712960 - | D-3-phosphoglycerate dehydrogenase TERM 4078 3713006 - 3713016 + g 83 -6.8 -4.97402 | GGAATCGCTTTCATT GCCT GCA AGGC TTTTTCTGCATTTTC TERM 4079 3714070 - 3714084 + g 73 -7.8 -4.06786 | overlap 3714076 TTCTTTCAGTGATTC GGTGTC TAA GGCACC TTTATGATATTCAAT TERM 4080 3714329 - 3714282 - R 82 -7.8 -4.46675 | opp_overlap 3714295, overlap 3714284 3714306 3714308 AGTCAACATAACAAA TATTTCGCTGGCAGCAATACAA ACGA TTGCCTTGCTGTCAGCATAACA AACAGTGCAAATGTT TERM 4081 3714327 - 3714284 - R 75 -8.2 -3.83144 | opp_overlap 3714295, overlap 3714282 3714306 3714308 TCAACATAACAAATA TTTCGCTGGCAGCAATACAA ACGA TTGCCTTGCTGTCAGCATAA CAAACAGTGCAAATG TERM 4082 3714499 - 3714470 - R 74 -9.4 -3.30199 | overlap 3714467 3714468 TAAAGGCAAAAATTA TCAGGATGAAGC AACCAA ACCTCATCCTGA ATACATATTAGCTGA rpiA 3715177 - 3714515 - | ribose-5-phosphate isomerase A TERM 4083 3716277 - 3716241 - g 71 -4.5 -4.4891 | gap 1, opp_overlap 3716244, overlap 3716245 CGGACGATGAGAAAA GTAACTGACGCCC-TA TTATCT TACGGGCGTCAGGTAT TACGGCAAGACTAGC TERM 4084 3716273 - 3716245 - g 76 -9.7 -3.77302 | gap 1, opp_overlap 3716244, overlap 3716241 CGATGAGAAAAGTAA CTGACGCCC-TA TTATCT TACGGGCGTCAG GTATTACGGCAAGAC iciA 3715398 - 3716291 + | chromosome replication initiation inhibitor protein yggE 3717048 - 3716293 - | hypothetical protein TERM 4085 3716834 - 3716847 + g 73 -2.3 -5.07567 | overlap 3716833 AAATATTGTGCGACG CGGGT ATCT GCCTG TTTTTTGGCATCTGC yggA 3717876 - 3717259 - | arginine exporter protein TERM 4086 3717411 - 3717400 - G 76 -2.2 -5.21709 | TGCCAGAGCAAAAAA CCAG GCAA CTGA AGCGCTCACGGCACC TERM 4087 3718070 - 3718053 - R 100 -11.3 -5.69068 | GAAAAAGAGAAAAAA CGGGCTA AAAA TAGCCCG TCAGACCGCTGGCAA YE3406 3719053 - 3718184 - | hypothetical protein TERM 4088 3719088 - 3719074 - R 86 -5.6 -5.26316 | overlap 3719075 CCACCCTACAAAAAA GTCCCC GCT GGGGAG ATTACGCAAAAATTA TERM 4089 3719087 - 3719075 - R 78 -9.1 -3.75067 | overlap 3719074 CACCCTACAAAAAAG TCCCC GCT GGGGA GATTACGCAAAAATT TERM 4090 3719257 - 3719270 + r 78 -9.5 -3.58522 | opp_overlap 3719257 CAATAAACGAAAAAA GGCCC CGCA GGGCC TTTCAGACTGCTACT TERM 4091 3719270 - 3719257 - R 100 -9.5 -5.46129 | opp_overlap 3719257 CAATAAACGAAAAAA GGCCC CGCA GGGCC TTTCAGACTGCTACT TERM 4092 3719289 - 3719319 + r 93 -12 -3.61398 | gap 1, opp_overlap 3719295, overlap 3719292 3719295 CAGACTGCTACTGCT GAC-GAACCCCAC TTTTTT GTGGGGTTCTGTC TTATTAGCGACCGAA TERM 4093 3719292 - 3719315 + r 95 -12.5 -3.26444 | opp_overlap 3719295, overlap 3719289 3719295 ACTGCTACTGCTGAC GAACCCCAC TTTTTT GTGGGGTTC TGTCTTATTAGCGAC TERM 4094 3719295 - 3719312 + r 75 -8.4 -3.76835 | opp_overlap 3719295, overlap 3719292 3719289 GCTACTGCTGACGAA CCCCAC TTTTTT GTGGGG TTCTGTCTTATTAGC TERM 4095 3719337 - 3719348 + r 70 -5.8 -4.40552 | overlap 3719326 ATTAGCGACCGAAGG TCGC GTTC GCGA TATTTTTTTCCTGCC YE3407 3720792 - 3719323 - | transposase for IS1668 TERM 4096 3719471 - 3719455 - G 93 -8.7 -5.08731 | opp_overlap 3719455 3719453 TAATAAACAATAAAA TAGCGCC AGC AGCGCTA TCTTCTTCATATTTT TERM 4097 3720860 - 3720829 - R 100 -15.2 -2.78384 | opp_overlap 3720834, overlap 3720834 CCTGTCCCTATTAGA TCAAAGTCCCGGCC AGGA GGCCAGGACTTTGT CAGCAGTCTGATACC TERM 4098 3720855 - 3720834 - R 100 -13.7 -3.86202 | opp_overlap 3720834, overlap 3720829 CCCTATTAGATCAAA GTCCCGGCC AGGA GGCCAGGAC TTTGTCAGCAGTCTG TERM 4099 3720834 - 3720855 + r 95 -11.5 -3.87373 | opp_overlap 3720829 3720834 CCCTATTAGATCAAA GTCCCGGCC AGGA GGCCAGGAC TTTGTCAGCAGTCTG TERM 4100 3720872 - 3720894 + r 77 -10.6 -3.17723 | opp_overlap 3720877 TTGTCAGCAGTCTGA TACCACGTCC TAT GGACGTGATA TTCGGTTAGAAATAA YE3408 3722502 - 3721000 - | hypothetical protein TERM 4101 3722736 - 3722714 - R 80 -6.2 -4.77173 | opp_overlap 3722714 3722715, overlap 3722715 TTTTGATAAAAGAAA GCCTCAGACA TTG TGTCAGAGGA TTGTTACGATAGAGC TERM 4102 3722715 - 3722735 + r 72 -9.7 -2.78813 | opp_overlap 3722714 3722715, overlap 3722714 TTTGATAAAAGAAAG CCTCAGACA TTG TGTCAGAGG ATTGTTACGATAGAG TERM 4103 3722735 - 3722715 - R 78 -9.7 -3.45581 | opp_overlap 3722715 3722714, overlap 3722714 TTTGATAAAAGAAAG CCTCAGACA TTG TGTCAGAGG ATTGTTACGATAGAG TERM 4104 3723254 - 3723298 + r 75 -3.2 -5.14965 | TCCCTTTCTAATCAA TGGGTTTATTATTTTC ATCTGACACCTCA GAAAATAATGAATCCA TTTTTTGCTGAGAGT traM 3723641 - 3723246 - | conjugal transfer protein TraM TERM 4105 3724040 - 3724051 + H 90 -7.2 -5.24531 | overlap 3724046 TGGATTCAGCTATTA CGGC CATT GCCG TTTTTTATAAAAAAT TERM 4106 3724046 - 3724071 + H 74 -9.9 -3.11272 | opp_overlap 3724066 3724067, overlap 3724040 CAGCTATTACGGCCA TTGCCGTTTTT TATA AAAAATGGCAA TCTTGCCTAGTAGTA TERM 4107 3724079 - 3724066 - H 71 -2.3 -5.24129 | opp_overlap 3724046 3724076, overlap 3724067 GTTTTTTATAAAAAA TGGCA ATCT TGCCT AGTAGTAGGCTGTGT YE3411 3724129 - 3724566 + | hypothetical protein TERM 4108 3724573 - 3724555 - T 100 -11.7 -5.82388 | AAAGCGCAAAAAAAA GCGGCTC ATTAA GAGCCGC TCAGACTGCTGACGA TERM 4109 3724584 - 3724614 + T 93 -12 -3.61398 | gap 1, opp_overlap 3724590, overlap 3724587 3724590 GCCGCTCAGACTGCT GAC-GAACCCCAC TTTTTT GTGGGGTTCTGTC TTATTAGCGACCGAA TERM 4110 3724587 - 3724610 + T 95 -12.5 -3.26444 | opp_overlap 3724590, overlap 3724584 3724590 GCTCAGACTGCTGAC GAACCCCAC TTTTTT GTGGGGTTC TGTCTTATTAGCGAC TERM 4111 3724590 - 3724607 + T 75 -8.4 -3.76835 | opp_overlap 3724590, overlap 3724587 3724584 CAGACTGCTGACGAA CCCCAC TTTTTT GTGGGG TTCTGTCTTATTAGC TERM 4112 3724632 - 3724643 + T 70 -5.8 -4.40552 | overlap 3724621 ATTAGCGACCGAAGG TCGC GTTC GCGA TATTTTTTTCCTGCC YE3412 3726087 - 3724618 - | transposase for IS1668 TERM 4113 3724766 - 3724750 - G 93 -8.7 -5.08731 | opp_overlap 3724748 3724750 TAATAAACAATAAAA TAGCGCC AGC AGCGCTA TCTTCTTCATATTTT TERM 4114 3726155 - 3726124 - R 100 -15.2 -2.78384 | opp_overlap 3726129, overlap 3726129 CCTGTCCCTATTAGA TCAAAGTCCCGGCC AGGA GGCCAGGACTTTGT CAGCAGTCTGAAAGG TERM 4115 3726150 - 3726129 - R 100 -13.7 -3.86202 | opp_overlap 3726129, overlap 3726124 CCCTATTAGATCAAA GTCCCGGCC AGGA GGCCAGGAC TTTGTCAGCAGTCTG TERM 4116 3726129 - 3726150 + r 95 -11.5 -3.87373 | opp_overlap 3726124 3726129 CCCTATTAGATCAAA GTCCCGGCC AGGA GGCCAGGAC TTTGTCAGCAGTCTG TERM 4117 3726182 - 3726169 - R 78 -9.5 -3.58343 | opp_overlap 3726169 GTCAGCAGTCTGAAA GGCCC CGCA GGGCC TTTTCAATCAGTCAA TERM 4118 3726169 - 3726182 + r 85 -9.5 -4.19817 | opp_overlap 3726169 GTCAGCAGTCTGAAA GGCCC CGCA GGGCC TTTTCAATCAGTCAA fba 3727289 - 3726210 - | fructose-bisphosphate aldolase TERM 4119 3727519 - 3727538 + r 80 -10.6 -3.55814 | opp_overlap 3727513 3727519 TAGCTAAAAGCGAAA CGGGCGGC TCTC GCCCCCCG TTATCTAAATTACTG TERM 4120 3727538 - 3727519 - R 89 -10.6 -3.9373 | opp_overlap 3727519, overlap 3727513 TAGCTAAAAGCGAAA CGGGCGGC TCTC GCCCCCCG TTATCTAAATTACTG TERM 4121 3727565 - 3727589 + r 85 -5.7 -5.1925 | ACTGCTTAGCGCGCT CTTCCAGCA TCACAAC TGCTGGCAG TTTTTTCCCTTCTAC pgk 3728711 - 3727548 - | phosphoglycerate kinase TERM 4122 3727789 - 3727804 + g 78 -7.6 -4.31329 | AACACACCAACCGGG CCATTC CACA GAATGG TTTTGGCGTTTTTCA TERM 4123 3728165 - 3728183 + g 86 -12.4 -3.53761 | TGGCAACCATTGGAC GCGCTGGG TTA CCCAGTGC TTTACCCAAGGCTTC epd 3729831 - 3728815 - | erythrose 4-phosphate dehydrogenase TERM 4124 3729587 - 3729608 + g 72 -10.9 -2.66316 | overlap 3729585 GGTAACTGCTCTATT TCTGGCTGA TGTA TCAGCCGGA TAATGTCGTCCCCGA TERM 4125 3730087 - 3730072 - R 100 -10.4 -5.75945 | opp_overlap 3730072, overlap 3730058 ATTGGCGAAAAAAAA GACCGC CAAA GCGGTC TTTTAACAGGTGCAT TERM 4126 3730072 - 3730087 + r 91 -10.4 -4.09864 | opp_overlap 3730058 3730072 ATTGGCGAAAAAAAA GACCGC CAAA GCGGTC TTTTAACAGGTGCAT tkt 3732165 - 3730171 - | transketolase YE3417 3732460 - 3733212 + | putative lipoprotein TERM 4127 3733259 - 3733230 - T 82 -7.8 -4.53602 | opp_overlap 3733232, overlap 3733232 GTTACACCAAATAAA TACTCACGCCCC ACAGCA GGGGCGTTAGTT CTATAACTCATATAT TERM 4128 3733232 - 3733257 + T 80 -10.4 -3.53164 | opp_overlap 3733230 3733232 TACACCAAATAAATA CTCACGCCCC ACAGCA GGGGCGTTAG TTCTATAACTCATAT TERM 4129 3733257 - 3733232 - T 86 -10.4 -3.8721 | opp_overlap 3733232, overlap 3733230 TACACCAAATAAATA CTCACGCCCC ACAGCA GGGGCGTTAG TTCTATAACTCATAT YE3418 3733605 - 3733285 - | putative Rieske protein TERM 4130 3733716 - 3733697 - R 100 -12.2 -5.42975 | overlap 3733704 3733705 GTATAGAAACAAAAA GGGCAAAC CTGA GTTTGCCC TCAGACTGCTGACAA TERM 4131 3733805 - 3733779 - R 74 -7.9 -3.9749 | gap 1, overlap 3733780 AGGTAGAAGAGTAAA GCGTCCGCGCCA GGGA CGGCGCGG-CTC GAGCCCCCAGGGAAG TERM 4132 3733880 - 3733896 + r 70 -8 -3.66654 | opp_overlap 3733879 CACTTTGTCATTAAC CTCAGG GCAAA CCTGAG TTTGCCCTTAAAGTG speA 3735912 - 3733933 - | arginine decarboxylase metK 3736915 - 3738069 + | S-adenosylmethionine synthetase TERM 4133 3738116 - 3738101 - T 86 -6 -5.30348 | opp_overlap 3738102, overlap 3738095 3738102 ACTCAATAACAAAAA CCCCCG CCAG CCGGGG TTTTTTTATGCTTGA TERM 4134 3738116 - 3738102 - T 75 -8.5 -3.76582 | opp_overlap 3738102, overlap 3738101 3738095 CTCAATAACAAAAAC CCCCG CCAGC CGGGG TTTTTTTATGCTTGA TERM 4135 3738102 - 3738116 + T 100 -8.5 -5.71983 | opp_overlap 3738101 3738095 3738102 CTCAATAACAAAAAC CCCCG CCAGC CGGGG TTTTTTTATGCTTGA YE3422 3738554 - 3738135 - | hypothetical protein YE3422A 3739002 - 3738571 - | hypothetical protein YE3423 3739304 - 3738999 - | transcription regulator ArsR TERM 4136 3739041 - 3739031 - G 71 -6.8 -4.15044 | overlap 3739040 CTTGTGGGCAATAAA GCTG ATA CAGC ACTTCAAGCAGTGCC YE3424 3739455 - 3739967 + | hypothetical protein endA 3740064 - 3740771 + | endonuclease I TERM 4137 3741011 - 3740999 - g 95 -3.3 -5.93809 | TGTGGATAAAAAAAA CCTGA TTG TCCGG TTGGCCGAAGGGCAG TERM 4138 3741214 - 3741199 - g 73 -3.2 -4.86731 | opp_overlap 3741201 3741209 GTCTGGCAAAGAAAA TTCAGC AGTG GCAGAA GATTGCTATTGCGGC YE3426 3740817 - 3741548 + | hypothetical protein gsh-II 3741574 - 3742527 + | glutathione synthetase TERM 4139 3742589 - 3742574 - f 80 -10.4 -3.49618 | GCCTCATAGAAGTAA GGCCCA GGGA TGGGCC TAGTCATGAACACAG YE3428 3742839 - 3743402 + | hypothetical protein YE3429 3743402 - 3743824 + | Holliday junction resolvase-like protein TERM 4140 3743965 - 3743979 + F 80 -3.5 -5.25805 | GCTCAAAATATTGCA CACCT TTCGC GGGTG TTTTTTACATTTATT YE3430 3744006 - 3744890 + | putative carbon-nitrogen hydrolase TERM 4141 3745578 - 3745556 - g 73 -9.8 -3.29263 | opp_overlap 3745572, overlap 3745564 AGACGGCGTTTATAA CGATGAGACC GAT GGCCACATCG ACAATATGTGCTGTT YE3431 3744972 - 3746018 + | agmatine deiminase YE3432 3747385 - 3746333 - | hypothetical protein TERM 4142 3747211 - 3747186 - G 80 -9.1 -4.20516 | overlap 3747187 TCCTCACTCAAGAAA TGTTGGCTTAA GCCG TTAAGCCAACT GGCATTGACGCGCGG TERM 4143 3747210 - 3747187 - G 84 -12.6 -3.11988 | overlap 3747186 CCTCACTCAAGAAAT GTTGGCTTAA GCCG TTAAGCCAAC TGGCATTGACGCGCG YE3433 3747486 - 3748181 + | hypothetical protein TERM 4144 3748733 - 3748711 - g 75 -6.2 -4.53034 | opp_overlap 3748729 3748730 GGTAGATAATGAAAA CGGCATCAAC AGC GTTATCGCCG CTGCAGGTAGCGCAC proC 3748217 - 3749038 + | pyrroline-5-carboxylate reductase TERM 4145 3749042 - 3749029 - f 76 -6.7 -4.46617 | AAAAGAAATGGAAAA GCTGT TCTA ACAGC GGCAAAATTTACAAA yggT 3749167 - 3749721 + | hypothetical protein YE3436 3749718 - 3750008 + | hypothetical protein TERM 4146 3750794 - 3750776 - g 74 -3.1 -5.06816 | gap 1 ACTCGTGAAGAAAAA CACG-CGG TTTC CCATCGTG GTCAGGCACTGAAAC YE3437 3750245 - 3750838 + | putative deoxyribonucleotide triphosphate pyrophosphatase YE3438 3750831 - 3751961 + | coproporphyrinogen III oxidase TERM 4147 3752031 - 3752000 - T 100 -8.8 -5.06735 | opp_overlap 3752000 3752002 GATAAATGAGAAAAA CAGGTTCAGACGAT ATTC ACAATCTGAACCTG TTAAATCCGGATCAT YE3439 3752791 - 3752051 - | hypothetical protein YE3440 3753796 - 3752894 - | glutaminase TERM 4148 3753899 - 3753919 + r 73 -8.9 -3.46511 | opp_overlap 3753900, overlap 3753900 GTCTGATAAAAACAA AGGCGCCTG CAT TAGGCGCCC TTATCAATTATCTAC TERM 4149 3753918 - 3753900 - R 100 -11.7 -4.96501 | opp_overlap 3753899 3753900 TCTGATAAAAACAAA GGCGCCT GCATT AGGCGCC CTTATCAATTATCTA TERM 4150 3753900 - 3753918 + r 88 -12.4 -2.67425 | opp_overlap 3753900, overlap 3753899 TCTGATAAAAACAAA GGCGCCTG CAT TAGGCGCC CTTATCAATTATCTA YE3441 3754276 - 3753950 - | hypothetical protein trmB 3754995 - 3754276 - | tRNA (guanine-N(7))-methyltransferase TERM 4151 3755132 - 3755119 - H 70 -5.9 -4.26076 | opp_overlap 3755119 TTATGCGCATTAAAA GCAGC TAAC GCCGC TGTAGTGCCAAGAAC mutB 3755473 - 3756561 + | adenine DNA glycosylase YE3444 3756626 - 3756898 + | hypothetical protein TERM 4152 3757531 - 3757520 - g 73 -2.2 -5.09259 | TACTGCAAAACAAAA TGCA AAAA CGCA CGTCTGGTTTGCATG mltC 3757024 - 3758112 + | murein transglycosylase C TERM 4153 3758164 - 3758145 - f 91 -12.2 -3.46304 | opp_overlap 3758145, overlap 3758139 TCTAAAAGATATCAA TGGCACAG TTCG CTGTGCCA TTTTTTATGATTAAA TERM 4154 3758145 - 3758164 + F 100 -12.2 -5.37345 | opp_overlap 3758145 3758139 TCTAAAAGATATCAA TGGCACAG TTCG CTGTGCCA TTTTTTATGATTAAA YE3446 3758283 - 3759032 + | hypothetical protein TERM 4155 3759058 - 3759090 + T 73 -2.8 -5.10029 | gap 1, opp_overlap 3759057 3759060, overlap 3759058 3759061 AGGGATAAAATATAG TAT-GACAGCCGA CATTCTCA TCGGCTGTCTATC TTTTTTCAGATTACT TERM 4156 3759061 - 3759086 + T 82 -10.5 -3.66769 | opp_overlap 3759060 3759057, overlap 3759058 3759058 GATAAAATATAGTAT GACAGCCGA CATTCTCA TCGGCTGTC TATCTTTTTTCAGAT speC 3761263 - 3759101 - | ornithine decarboxylase TERM 4157 3759671 - 3759683 + g 78 -9.1 -4.07568 | opp_overlap 3759679 CAGATCGCACTTTTC CGGCA CAA TGCCG TTTTCGCGCAGAAAA TERM 4158 3760145 - 3760156 + g 80 -3 -5.42131 | GCGCTTTTGTCCTTT GATA TGAT TATC TTTTTTATGTACTTG TERM 4159 3760839 - 3760829 - G 79 -3.2 -5.20154 | ATAGAATTCAAAAAA CTGA CGG CCAG CGGGATGCTTACGGA TERM 4160 3761296 - 3761308 + r 70 -7.7 -3.65902 | overlap 3761291 GGTCAGGTATGAGGC TGCCA CTT TGGCA TTTAGATAGCATCAC TERM 4161 3761964 - 3761948 - R 76 -10.9 -2.62616 | opp_overlap 3761947 3761946 3761943 TCAGTCGGTAGAGCA GGGGATT GAA AATCCCC GTGTCCTTGGTTCGA TERM 4162 3762124 - 3762150 + r 81 -7.2 -4.71776 | opp_overlap 3762124 3762132 TAGGGGAATAATAAA CCGGAGAATGTC GAT GACAAACTTCGG TTTTATTGCGTCTTA YE3450 3763237 - 3762254 - | phage integrase TERM 4163 3762628 - 3762649 + g 73 -7.3 -4.2687 | gap 1 TCGGACGTAACACTC GGGCTATCGG TAC CCGAT-GCTC TTTATGGTTTTTCGA YE3451 3764463 - 3763267 - | hypothetical protein TERM 4164 3763527 - 3763514 - G 73 -2.3 -5.05301 | AAATAACGATAAAAA CAGTC TGGC GTCTG AACAAAAACATGCTG TERM 4165 3764357 - 3764340 - G 70 -9.9 -3.14132 | overlap 3764351 GCTTGCGGTTATCAA CGGAAAG AAGA CTTTCCG CATTCAGAAAGGGAA YE3452 3764827 - 3765171 + | hypothetical protein TERM 4166 3765204 - 3765177 - T 93 -11.2 -4.17762 | opp_overlap 3765181, overlap 3765181 TAGGGCTTAAAAGAA GGAACCCCGGCC AGTT GGCCGGGGTTAG ATAGCTCACTAAATA TERM 4167 3765181 - 3765200 + T 100 -16.4 -3.08133 | opp_overlap 3765177 3765181 GCTTAAAAGAAGGAA CCCCGGCC AGTT GGCCGGGG TTAGATAGCTCACTA TERM 4168 3765200 - 3765181 - T 100 -16.4 -3.68798 | opp_overlap 3765181, overlap 3765177 GCTTAAAAGAAGGAA CCCCGGCC AGTT GGCCGGGG TTAGATAGCTCACTA YE3453 3765561 - 3765220 - | hypothetical protein YE3454 3767960 - 3765558 - | putative hemolysin TERM 4169 3767936 - 3767905 - G 79 -10.4 -3.75766 | gap 1, opp_overlap 3767909 3767910, overlap 3767909 3767910 TGGATAACGGAATAA TCAAT-GCTGGCAAT AAT ATTGCCAGCTATTAA TATGAAATAGTAGGA TERM 4170 3767931 - 3767909 - G 77 -10.6 -3.55973 | opp_overlap 3767909 3767910, overlap 3767905 3767910 TAACGGAATAATCAA TGCTGGCAAT AAT ATTGCCAGCT ATTAATATGAAATAG TERM 4171 3767910 - 3767930 + g 90 -14.1 -3.20078 | opp_overlap 3767909 3767905 3767910, overlap 3767909 AACGGAATAATCAAT GCTGGCAAT AAT ATTGCCAGC TATTAATATGAAATA TERM 4172 3767930 - 3767910 - G 88 -14.1 -2.72861 | opp_overlap 3767910 3767909, overlap 3767909 3767905 AACGGAATAATCAAT GCTGGCAAT AAT ATTGCCAGC TATTAATATGAAATA TERM 4173 3768879 - 3768868 - H 70 -7.2 -3.77773 | opp_overlap 3768875, overlap 3768856 CAATAACGCAAAACA GCGC TATG GCGC ACCACGTCTTGCTGA TERM 4174 3769832 - 3769794 - g 71 -10.2 -2.87564 | opp_overlap 3769795, overlap 3769778 GTATTGGGGGAGAGA TCCCGCCTGAATGGGAGA ACT CCCCCCATTCAGGATGGT TAGTTAAGAAAGTAA TERM 4175 3769795 - 3769831 + G 78 -10.8 -3.34013 | opp_overlap 3769778 3769794 TATTGGGGGAGAGAT CCCGCCTGAATGGGAG AACTC CCCCCATTCAGGATGG TTAGTTAAGAAAGTA YE3457 3769251 - 3769835 + | hypothetical protein YE3458 3770802 - 3769900 - | hypothetical protein TERM 4176 3770845 - 3770833 - R 84 -5.5 -5.31275 | opp_overlap 3770844, overlap 3770835 TTTGATGATAAAAAA GAGAG AGC CTCCC CACTGGGGTAAGGCT TERM 4177 3770863 - 3770835 - R 88 -9.6 -4.29153 | gap 1, opp_overlap 3770844, overlap 3770833 TGATGATAAAAAAGA GAGAGCCTC-CCC ACTG GGGTAAGGCTCCC AATGGGTTTTGTTAC TERM 4178 3770844 - 3770869 + r 79 -6.8 -4.73613 | opp_overlap 3770833 3770835 AAAAGAGAGAGCCTC CCCACTGGGG TAAGGC TCCCAATGGG TTTTGTTACTGATCA YE3459 3771190 - 3770903 - | hypothetical protein YE3460 3772188 - 3771187 - | hypothetical protein TERM 4179 3771569 - 3771547 - G 77 -4 -5.14563 | overlap 3771548 GGCTTCAGTAAAAAA CTGCCCCGCC AAT GGCATGACAA TTTCATCAGTCAATG TERM 4180 3772236 - 3772209 - R 100 -9.8 -5.76949 | gap 1, opp_overlap 3772220, overlap 3772224 GAGCCTCAAAAAAAA GCGCAGCCCAGCC AAT GGCGGAG-TGCGC CACAGGTGGATTAAG YE3461 3773480 - 3772593 - | putative phage integrase TERM 4181 3773673 - 3773687 + H 80 -10 -3.60792 | TCTTGCGAGGTTCCC CAGGTC TCA GACCTG TTTGCAGCTTACGCC TERM 4182 3774869 - 3774895 + H 74 -9.6 -3.2614 | opp_overlap 3774869 GGACAGTTTGCAGAA TTCGATTACTTT GCA AGGGTAATCGAA TTCCTGTCAAAAATG TERM 4183 3775093 - 3775077 - H 75 -2.3 -5.31877 | overlap 3775080 ATTCAGGATAAAAAA TTATTAC AAG GTAATGA GATGCAGTTATTAAA YE3462 3775095 - 3776192 + | hypothetical protein YE3463 3776189 - 3777172 + | hypothetical protein YE3464 3777495 - 3777758 + | hypothetical protein YE3465 3779338 - 3777818 - | hypothetical protein YE3466 3780744 - 3779338 - | hypothetical protein TERM 4184 3780630 - 3780616 - G 79 -10 -3.8512 | GATGGAGTAGAACAA GCCATC GCT GATGGC ACCACTTGCTGACAA YE3467 3781718 - 3780765 - | hypothetical protein YE3468 3782068 - 3781715 - | hypothetical protein TERM 4185 3783003 - 3782956 - H 82 -6.8 -4.75776 | opp_overlap 3782976 AAGCCAAGTCAAAAA GGGTGACAACCGGAGCGTAACG CGCC CGACACGCCGCGTTTGTCTGCC TCTGGCGATATGCAA TERM 4186 3783170 - 3783187 + H 79 -6.9 -4.6575 | ACTATAAGGGCTTCC CCGGCAT GTCA ACGCCGG TTTTATGGTTTCTGT TERM 4187 3783356 - 3783366 + H 79 -6.8 -4.72272 | overlap 3783343 CAGATAGGCCTCACG GGGT CTA ACCC TTTTTCATCAACGAG arsR2 3783946 - 3784299 + | DNA-binding transcriptional repressor ArsR TERM 4188 3784410 - 3784428 + G 81 -6 -4.84761 | overlap 3784412 TCTGCGGTACAGATG TTGATCAG GCT CTGGTCGA TTTTTCTGCGGATGT arsD 3784346 - 3784708 + | arsenical resistance operon trans-acting repressor arsA2 3784726 - 3786477 + | arsenical pump-driving ATPase TERM 4189 3786486 - 3786521 + F 71 -4.6 -4.70583 | gap 1, overlap 3786486 3786488 TGGTTAAATTATTGT CATCACG-CAGGGCAGT AAC GCTGCCCTGTCAGGAGG TTTTATGTTACTGGC TERM 4190 3786533 - 3786544 + G 81 -5.8 -4.91109 | GAGGTTTTATGTTAC TGGC AGGA GCCA TTTTTATCCTGACCA TERM 4191 3786732 - 3786747 + G 77 -6.8 -4.62069 | TATCATCAGTCTGTT GCTGGA TGAG TCCGGC TTTTTCGAATGGGCG arsB2 3786526 - 3787815 + | arsenical pump membrane protein arsC2 3787828 - 3788253 + | arsenate reductase tpn1330 3789492 - 3788299 - | transposase for IS1330 TERM 4192 3788409 - 3788376 - G 74 -11.1 -3.02144 | opp_overlap 3788384 3788387 CTATTCGTCGCAATA TTAGCGGAGAGTGTC TTAA GACATTCTCTGCTAA CGTCAGATAAGATAT arsH 3790404 - 3789694 - | putative arsenic resistance protein YE3478 3790829 - 3790536 - | hypothetical protein YE3479 3790936 - 3792069 + | putative membrane transport protein TERM 4193 3792116 - 3792082 - T 85 -9.4 -4.09276 | opp_overlap 3792083, overlap 3792083 TAATAAATATAATAA GGGTCTTCTGCTTTCA TGT TGAAAAAAGAAGACCT TTTAACTTCTGTAAT TERM 4194 3792083 - 3792115 + T 100 -10.7 -4.34267 | opp_overlap 3792082 3792083 AATAAATATAATAAG GGTCTTCTGCTTTCA TGT TGAAAAAAGAAGACC TTTTAACTTCTGTAA TERM 4195 3792115 - 3792083 - T 95 -12.9 -3.03939 | opp_overlap 3792083, overlap 3792082 AATAAATATAATAAG GGTCTTCTGCTTTCA TGT TGAAAAAAGAAGACC TTTTAACTTCTGTAA ccdB 3792522 - 3792208 - | cytotoxic protein ccdA 3792761 - 3792525 - | gyrase inhibitor antitoxin TERM 4196 3793190 - 3793230 + r 100 -15.5 -4.34711 | CTACGGCTTGTTCAA CGGGTGTTATCTGCCCAAA GGA TTTGAGCAGTCAACACCCG TTTTCGGTTACTTTT YE3482 3795880 - 3793238 - | hypothetical protein TERM 4197 3794608 - 3794595 - G 73 -3.7 -4.99435 | overlap 3794596 TTGAAGAACGAAAAA CCCGG ATTA CCGGT GCCCGTGTCCCGTCC YE3483 3796446 - 3796042 - | putative lipoprotein TERM 4198 3796338 - 3796358 + g 71 -7.5 -4.02719 | opp_overlap 3796337 ACAGTGTCAGCATAG TGCTGCCGC CCG GCGGTAACA TTTGATCTTTACTGG YE3484 3797913 - 3796456 - | hypothetical protein YE3485 3798827 - 3797961 - | hypothetical protein YE3486 3799477 - 3798824 - | hypothetical protein TERM 4199 3799286 - 3799303 + g 77 -2.6 -5.1861 | GCTGTAAACGGTGGA TGGCGG TACTTC CCACCA TTTTTTGGTACTACC YE3487 3799848 - 3799474 - | putative inner membrane protein YE3488 3800208 - 3799858 - | hypothetical protein YE3489 3800472 - 3800224 - | hypothetical protein YE3490 3800777 - 3800469 - | hypothetical protein TERM 4200 3801624 - 3801608 - R 100 -12.3 -3.56099 | overlap 3801621 TATAATTTTCTCAAA GTCGCTG AAA CAGCGAC TATCGAAGTCATCAG YE3492 3802434 - 3801682 - | putative inner membrane protein TERM 4201 3802211 - 3802193 - G 71 -8.8 -3.77806 | TCGGACATCAAAAGA CTGCGGGT AAA ACCCTCAG ATAAATATGCGCGTT TERM 4202 3802404 - 3802420 + g 75 -10.1 -3.40899 | overlap 3802406 TAGGCGGTTCAACGT TGCGCCG TGG CGGCGTA TTCTCCTGAGCCATT TERM 4203 3802406 - 3802418 + g 75 -10.5 -3.27475 | overlap 3802404 GGCGGTTCAACGTTG CGCCG TGG CGGCG TATTCTCCTGAGCCA YE3493 3804554 - 3802434 - | TraG-family protein TERM 4204 3804126 - 3804103 - G 76 -8.2 -3.96483 | gap 1 ACTGGATTTAAACAA GTATCGGCCTG CGT CAG-CCGACAC AGCCATGGCAAGCTG YE3494 3805234 - 3804740 - | hypothetical protein YE3494A 3805806 - 3805258 - | hypothetical protein TERM 4205 3805638 - 3805656 + g 73 -7.4 -4.25848 | GCCATGCATCCTCTC GGGTTTCA TAA TGATACCC TTTTCCTGCCACGTT TERM 4206 3805758 - 3805728 - G 78 -12 -2.73542 | gap 1 GTGAACTTTCAACCA GTGCCAGC-GAGT ATAAGA ACTCTGCTGGCAC TCGGGCTTCAGCGGC YE3495 3806642 - 3805875 - | hypothetical protein TERM 4207 3806436 - 3806451 + g 75 -10.4 -3.36327 | opp_overlap 3806431 TTCAACATCACTTAG CCCCCA CTGC TGGGGG TTCTGCCTGGGCTGA TERM 4208 3806775 - 3806752 - R 76 -11.1 -2.56828 | overlap 3806751 AAACAGGGAGAATAT GGCGATGTT TAACTC AACATCGCC CGTTAAAAATTACAG YE3495A 3807132 - 3806785 - | hypothetical protein YE3496 3807365 - 3807111 - | hypothetical protein TERM 4209 3807345 - 3807374 + g 91 -12.1 -3.87323 | AATGTTGTGGTTAGA CGCCTCGTTGTGT TCTA GCACATCGGGGCG TTGTCTTTACTCGTG YE3496A 3807520 - 3807876 + | putative DNA-binding protein YE3497 3808951 - 3808031 - | putative transposase TERM 4210 3808631 - 3808600 - G 70 -2.2 -4.85918 | opp_overlap 3808609, overlap 3808609 CATGATAGAACAAAA TGGGAATAACAAGC GGCA GCTTGTCGTTACCC GCATCCAGATGGCGT YE3498 3810322 - 3809045 - | putative type IV pilus protein TERM 4211 3810072 - 3810054 - G 73 -2.5 -5.03314 | gap 1, opp_overlap 3810041, overlap 3810058 CCCATTGGCAAAAAA CCAGTGTT CTTT AACA-TGG CCGTTGTCACCATAA YE3499 3810994 - 3810326 - | type IV prepilin peptidase TERM 4212 3810820 - 3810792 - G 72 -11.1 -2.64155 | overlap 3810805 TGCCCCTCAAACGGA GCTACCGCAAT CACTGCC ATTGCGGCAGC ATGAAGCCAGTGATA YE3500 3811578 - 3810991 - | putative type IV prepilin TERM 4213 3811363 - 3811379 + g 78 -5.9 -4.73388 | opp_overlap 3811363 CATCCCACTAGTATA GTTGTAA CCG TTACGAC TTTTTAGTAGCCCTT YE3501 3812702 - 3811593 - | type IV pilus integral membrane protein TERM 4214 3811667 - 3811657 - G 73 -5.4 -4.49316 | ATGAGTAAGAAGAAA CTGA AAA TCAG CAGCAGAGAGAAAAG YE3502 3814248 - 3812695 - | putative type IV pilus protein YE3502A 3814736 - 3814257 - | putative type IV pilus protein YE3503 3816030 - 3814723 - | putative type IV pilus protein TERM 4215 3815012 - 3814987 - G 71 -4.7 -4.48743 | opp_overlap 3814999 3815002 AAAATGTGAAATAAA CTGCATCAACT GGAC ACCTGACGCAG GGATCTTTTCATCTC TERM 4216 3815378 - 3815388 + g 87 -6.8 -5.06585 | opp_overlap 3815372, overlap 3815382 TTAAGTAATGCCTTA GCCT GAA AGGC TTTTTCTATCATTTC YE3504 3817721 - 3816033 - | putative type IV pilus operon lipoprotein TERM 4217 3817391 - 3817362 - G 75 -3.5 -5.1417 | gap 1 CGACAAAACCAAAAA GGCATCTGGCGTGA TGG TCACACGAGG-GCC ACACAAGCCGGTAAT YE3505 3818170 - 3817733 - | putative type IV pilus operon exported poprotein TERM 4218 3818160 - 3818140 - G 70 -2.5 -4.93296 | overlap 3818144 CCATCAGCACAAAAA CCATCGC CATCACT GCTATGG CATAACCCACCTTAG YE3506 3819146 - 3818172 - | putative type IV pilus operon lipoprotein TERM 4219 3819314 - 3819286 - R 100 -11.8 -4.26188 | opp_overlap 3819289 3819292, overlap 3819289 TCTACATATTTAAAA GAAGAACACCGG ACTGG CCGGTGTTCTTT CTAGTGATTAAAACA TERM 4220 3819289 - 3819311 + r 100 -13.5 -4.02022 | opp_overlap 3819289 3819286, overlap 3819292 ACATATTTAAAAGAA GAACACCGG ACTGG CCGGTGTTC TTTCTAGTGATTAAA TERM 4221 3819311 - 3819289 - R 100 -13.5 -4.24602 | opp_overlap 3819289 3819292, overlap 3819286 ACATATTTAAAAGAA GAACACCGG ACTGG CCGGTGTTC TTTCTAGTGATTAAA TERM 4222 3819292 - 3819308 + r 85 -9.4 -4.12857 | opp_overlap 3819289 3819286, overlap 3819289 TATTTAAAAGAAGAA CACCGG ACTGG CCGGTG TTCTTTCTAGTGATT YE3507 3819772 - 3819341 - | hypothetical protein TERM 4223 3819455 - 3819445 - G 74 -6.8 -4.36914 | TGGCCGCCGATAAAA TGGC ATC GCCA TAAGCATCCGTCGTC TERM 4224 3819861 - 3819845 - R 100 -10.8 -5.72622 | opp_overlap 3819844 3819838 CTGAGAAATAAAAAA CGCCGG GGTCA CCGGCG CAATTTAGTTTTTAA YE3508 3820201 - 3819884 - | hypothetical protein YE3509 3821043 - 3820501 - | hypothetical protein YE3510 3822091 - 3821333 - | hypothetical protein TERM 4225 3821787 - 3821768 - G 71 -9.2 -3.48276 | opp_overlap 3821779 3821781 3821782 TGTCGCTTCAGATAA GGTTGCCC CTTT GGGCAGCC ACTGCATATTTTTTC TERM 4226 3821779 - 3821795 + g 74 -2.9 -5.07053 | opp_overlap 3821768, overlap 3821781 3821782 ATAAGGTTGCCCCTT TGGGCAG CCA CTGCATA TTTTTTCCAATGCTT TERM 4227 3822213 - 3822243 + r 100 -14.2 -4.62069 | overlap 3822214 3822217 TGATTAGATGGCTTT TTAATCTTGTTGCC AGT GGCAACAAGATTAC TTTTTAACCTGCGCA TERM 4228 3822214 - 3822242 + r 100 -17.7 -3.3692 | overlap 3822213 3822217 GATTAGATGGCTTTT TAATCTTGTTGCC AGT GGCAACAAGATTA CTTTTTAACCTGCGC TERM 4229 3822217 - 3822239 + r 100 -15 -3.81926 | overlap 3822214 3822213 TAGATGGCTTTTTAA TCTTGTTGCC AGT GGCAACAAGA TTACTTTTTAACCTG YE3511 3823462 - 3822260 - | hypothetical protein TERM 4230 3822736 - 3822762 + g 75 -5.8 -4.60255 | opp_overlap 3822740 3822742, overlap 3822738 AAATGGCTGATTTAT TACAGAGTTCGA AAT TCGAACCCAGTG TTTTTGAGCCATTCT TERM 4231 3822943 - 3822964 + g 77 -6.5 -4.53419 | overlap 3822940 3822944 TCTCATTTAGTACTG CCAGTGCGG TCAT TCGCACTGC TTTGTTCTTGTGCTG TERM 4232 3822944 - 3822963 + g 73 -10 -3.30967 | overlap 3822940 3822943 CTCATTTAGTACTGC CAGTGCGG TCAT TCGCACTG CTTTGTTCTTGTGCT YE3512 3824137 - 3823568 - | hypothetical protein YE3513 3825720 - 3824134 - | putative ATP/GTP binding protein dnaB2 3827087 - 3825720 - | putative DNA helicase TERM 4233 3826682 - 3826696 + g 73 -7.8 -4.06993 | opp_overlap 3826679, overlap 3826683 TGATTGCAGCAATAT TCGCAC GCG GTGCGG TTATTTCATGTGTGA YE3515 3827961 - 3827080 - | hypothetical protein TERM 4234 3827564 - 3827547 - G 71 -7 -4.09963 | CCGCAAGAACAATAA GCTCCA ACATAA TGGAGC GAGCACCTTGAGAAT TERM 4235 3827989 - 3827967 - R 84 -10.7 -3.67792 | TTATATGCATTTAAA CACCTGAAT TAGTT ATTCAGGTG AGCAATTACAATTTA TERM 4236 3828058 - 3828036 - R 73 -8.4 -3.62591 | opp_overlap 3828036 3828033 3828038, overlap 3828040 CTTATAACGCTTAAA CGCAGGGATT GAA AATCCCCGTG TCCTTGGTTCGATTC TERM 4237 3828301 - 3828280 - R 71 -9.5 -2.91695 | gap 1, opp_overlap 3828283, overlap 3828277 3828284 TCTAGTGTCAAATCA GCAA-GGCTC ACT GAGCCCTTGC CTCAAGCCGTTACAT TERM 4238 3828296 - 3828284 - R 71 -9.1 -3.32769 | opp_overlap 3828283, overlap 3828277 3828280 GTGTCAAATCAGCAA GGCTC ACT GAGCC CTTGCCTCAAGCCGT TERM 4239 3828982 - 3828994 + r 72 -6.3 -4.37971 | opp_overlap 3828982 CGCTCTTACCACAGA TCCAT TAA ATGGA TTTTCCTCATGTTTT YE3518 3829686 - 3829378 - | hypothetical protein TERM 4240 3829503 - 3829488 - G 74 -4 -4.97158 | TGAGAGTAAATAAAA GAAGCT CTTG AACTTC TATATGGTCAATGTG YE3519 3829958 - 3830125 + | hypothetical protein YE3520 3831526 - 3830294 - | hypothetical protein TERM 4241 3830681 - 3830693 + g 77 -2.7 -5.23292 | GCTCTCATTCTGGGC TATTG GGA CAGTA TTTTGTTTTATATCA TERM 4242 3831157 - 3831173 + g 73 -2.1 -5.14563 | overlap 3831140 3831160 CTTCCGGTTGCGCCC CGACCGG CAA CAGGTAG TTTTTTGATAGCCGG TERM 4243 3831803 - 3831780 - H 100 -16.8 -3.17763 | opp_overlap 3831780 TGTATAGCCTAGTAA GCGCAGTCTG ACAA CAGACTGCGC TTATCCGACATGACC TERM 4244 3831780 - 3831803 + H 100 -16.8 -3.30124 | opp_overlap 3831780 TGTATAGCCTAGTAA GCGCAGTCTG ACAA CAGACTGCGC TTATCCGACATGACC TERM 4245 3832146 - 3832134 - H 71 -3.3 -5.07011 | TATATAAATTAAAAA CTGTG TCA CTCAG GACCTAGATTGATTA TERM 4246 3833060 - 3833047 - H 74 -9.5 -3.40403 | CGCCCCGCATTATAA GCCGC TCGC GCGGC CACCAGGATGGCCTC TERM 4247 3833552 - 3833534 - H 72 -8 -3.74872 | ATTGAGTGGATCAAA GGTCAGCG GTG CGCCGCCC CGATTGAAAAAGGTG YE3525 3836292 - 3836549 + | hypothetical protein TERM 4248 3836620 - 3836587 - T 76 -8.1 -4.21194 | opp_overlap 3836613 TGCCATGATTGAAAA GGCTCAGAGCAATGC CGTC ACACACCTCTGAGCC AGGTTTTATCCACTA potE2 3837980 - 3836661 - | putrescine transporter TERM 4249 3838053 - 3838010 - R 83 -8.8 -4.09459 | gap 1, opp_overlap 3838010 3838009, overlap 3838042 GTAAAAATTGAGAAA GCGGAGAGCATGGCTGGAGCA CGA CGATAAAGCCACGC-CTCCGC AGTTTTGGTTATAAA speF2 3840264 - 3838102 - | ornithine decarboxylase TERM 4250 3838615 - 3838599 - G 70 -9.5 -3.18681 | overlap 3838602 GCGCAATTTGAGCAA CAAGATG CTG CATCTTG GCCATATCTTCCGCT TERM 4251 3838672 - 3838684 + g 73 -7.7 -4.07568 | AAGATCGCATTTTTC TGGCA CGA TGCCA TTTTCACGCAAGAAG TERM 4252 3839146 - 3839157 + g 77 -3 -5.33866 | GCGCGCCTGCCCTTT GATA TGCT TATC TTTTTTGTGGATTTG YE3528 3842349 - 3841009 - | hypothetical protein YE3529 3844303 - 3842531 - | hypothetical protein TERM 4253 3844224 - 3844201 - G 70 -9.6 -3.20573 | opp_overlap 3844201, overlap 3844189 3844199 CCAGCGACACCAATA TGGTGATCGC AACC GCCATCACCA TGCTCTCGACGCCAT YE3530 3845468 - 3844419 - | multidrug resistance protein MdtN TERM 4254 3844883 - 3844865 - G 75 -10.2 -3.39449 | GTTCAGCAATAGCAA GTGCCGCG CGG CGCGCCAC CACCAGCGCTTCCGA YE3531 3845804 - 3845478 - | hypothetical protein TERM 4255 3845682 - 3845670 - G 75 -7.7 -4.21194 | overlap 3845655 CCCCACTAGCGAAAA TGAGG GAG CCTCA GCACCGAAGCAACCA TERM 4256 3845840 - 3845857 + r 100 -11.3 -3.99324 | AATTAACTGGCGCTA CCCTGAC AGAA GTCAGGG TTTGTCATCATAAAA TERM 4257 3845886 - 3845899 + r 71 -4.5 -4.64657 | AAAACCGCTAATGAT CACGT CCCA GCGTG TTTTTGAAAATTTGC YE3532 3847341 - 3845878 - | hypothetical protein acpY 3847876 - 3847625 - | hypothetical protein YE3534 3849801 - 3847876 - | Serine rich protein yspD 3851058 - 3850012 - | YspD yspC 3852405 - 3851074 - | membrane protein yspB 3854454 - 3852424 - | putative type III secretion system effector protein sycA 3854992 - 3854483 - | putative type III secretion apparatus protein TERM 4258 3855109 - 3855080 - R 78 -5.7 -4.83615 | gap 1, opp_overlap 3855077 3855081, overlap 3855081 GAGTTCTTATAAAAA GCGAT-GCGAGCTA ATT TGGCTCGCTATCGT TAGTTTCTTCCTGCG TERM 4259 3855108 - 3855081 - R 76 -9.2 -3.49687 | gap 1, opp_overlap 3855077 3855081, overlap 3855080 AGTTCTTATAAAAAG CGAT-GCGAGCTA ATT TGGCTCGCTATCG TTAGTTTCTTCCTGC TERM 4260 3855081 - 3855108 + r 90 -11.4 -3.70925 | gap 1, opp_overlap 3855081 3855080, overlap 3855077 AGTTCTTATAAAAAG CGAT-GCGAGCTA ATT TGGCTCGCTATCG TTAGTTTCTTCCTGC ysaU 3856214 - 3855090 - | surface presentation of antigens protein SpaS ysaT 3857030 - 3856230 - | putative type III secretion apparatus protein ysaS 3857299 - 3857030 - | type III secretion apparatus protein spaP 3857989 - 3857315 - | surface presentation of antigens protein SpaP ysaQ 3858930 - 3857992 - | type III secretion apparatus protein YE3543 3859997 - 3858930 - | type III secretion protein YE3543A 3860424 - 3859969 - | hypothetical protein TERM 4261 3860261 - 3860282 + gr 95 -11.6 -3.84451 | TCACGGGTCAACTCC GCAGCCTG GTCATA CAGGCTGC TTTGAGTTTCCAAAA ysaN 3861716 - 3860424 - | ATP synthase SpaL ysaK 3862127 - 3861720 - | type III secretion sytem protein ysaV 3864211 - 3862139 - | type III secretion system apparatus protein TERM 4262 3862499 - 3862511 + g 70 -7.7 -3.82656 | ACGGACATATTCCAC CAGCA TCA TGCTG TCTTTCTCTTTTGGC TERM 4263 3863669 - 3863652 - G 71 -6.3 -4.25283 | gap 1, opp_overlap 3863652 3863654 ATCGCCCCATCAAAA GAGCC-GT ATA ACTGGCTC TCGTTCTCCATATCA ysaW 3865317 - 3864208 - | type III secreted effector protein TERM 4264 3864566 - 3864542 - G 70 -2.1 -4.91109 | gap 1, opp_overlap 3864542 3864544, overlap 3864544 TCGGTATGAGAAAAA CGCTGG-CGA AATGTA TCGTCCAGTG ATTTCATCTCTCTTA TERM 4265 3864789 - 3864806 + g 76 -2 -5.24129 | gap 1, overlap 3864792 ACAGCATTCTCAAGT TGCCAGC CGACT GCTG-CA TTTTTTGTGCAAAAG ysaC 3866999 - 3865308 - | type III secretion system protein ysaE 3867669 - 3866989 - | AraC family transcription regulator YE3550 3867949 - 3869178 + | hypothetical protein YE3551 3869209 - 3869517 + | hypothetical protein TERM 4266 3869528 - 3869557 + F 72 -9.5 -3.09784 | opp_overlap 3869523 3869521 3869520, overlap 3869511 3869527 CATAATATTATTACT GCGTAATATCA GTGTGCGG TGATATTACGC CTTTATTAAGGATAG TERM 4267 3869639 - 3869629 - g 75 -5.4 -4.77165 | TTTCGCAGAACAAAA TCTC CCT GAGA TGGTGCCGGGTAGTG ysaI 3869576 - 3869878 + | putative virulence associated protein TERM 4268 3870600 - 3870590 - g 87 -5.4 -5.36314 | overlap 3870593 CAAAACAGCAAAAAA GAAG CCC CTTC GGACAGTACGGAGCA ysaJ 3869882 - 3870625 + | type III secretion system apparatus lipoprotein YE3554 3870622 - 3871170 + | hypothetical protein TERM 4269 3871258 - 3871248 - g 75 -3.2 -5.14563 | overlap 3871257 GCCGCTATGAAAAAA CGCT AAC AGCA CAGGCCAAAAAACAG YE3555 3871205 - 3871849 + | hypothetical protein YE3556 3871917 - 3872288 + | hypothetical protein ysaH 3872301 - 3872777 + | type III secretion system effector protein TERM 4270 3872824 - 3872843 + F 70 -7.9 -3.61438 | opp_overlap 3872824 3872821 3872819, overlap 3872822 AGCACACAGAGATCA CTCTCCA AACGCA TGGAGAG TATTCTTTAATATAC TERM 4271 3873368 - 3873354 - g 71 -4.2 -4.7497 | opp_overlap 3873354, overlap 3873355 GTTATGCACCAAAAA GGCATC ATT GATGCA GTTATTACAACCTGT YE3558 3872952 - 3873437 + | hypothetical protein YE3559 3873442 - 3873876 + | hypothetical protein ysrR 3873905 - 3874615 + | response regulator protein ysrS 3874599 - 3876968 + | sensor kinase protein YE3561A 3876961 - 3877209 + | hypothetical protein TERM 4272 3877239 - 3877215 - f 76 -7 -4.49906 | overlap 3877205 3877217 3877218 TAACAGCTAAATAAA TAGCCCCGGC GACTA GCCGGGGTTC GGAAAATGAAAGCGC TERM 4273 3877237 - 3877217 - f 81 -9.6 -3.84346 | overlap 3877205 3877215 3877218 ACAGCTAAATAAATA GCCCCGGC GACTA GCCGGGGT TCGGAAAATGAAAGC TERM 4274 3877236 - 3877218 - f 91 -13.1 -2.89523 | overlap 3877217 3877215 CAGCTAAATAAATAG CCCCGGC GACTA GCCGGGG TTCGGAAAATGAAAG TERM 4275 3877643 - 3877661 + F 100 -10.3 -5.14563 | AGTCAACACCTTCTT TGCCGCT TGTAT AGCGGCA TTTTTTAATCGGAAA YE3562 3877682 - 3878191 + | hypothetical protein TERM 4276 3878487 - 3878465 - g 80 -4.2 -5.25656 | overlap 3878468 AAAATCATCAAAAAA TCAGTGATAA CAA CTATCACCAA CTTATTTTCCAGTTC YE3563 3878242 - 3878727 + | hypothetical protein yst1C 3878724 - 3879266 + | general secretion pathway protein C TERM 4277 3880052 - 3880042 - g 87 -6.8 -5.07053 | AAGCAGCGGAAAAAA TGCC AAT GGCA GAATGTCCGCCACCA YE3565 3879335 - 3881311 + | general secretion pathway protein D yst1E 3881308 - 3882804 + | general secretion pathway protein E TERM 4278 3883305 - 3883294 - g 70 -2.2 -4.87318 | overlap 3883302 GCCAAAAGCTAAAAA GCAA AATG CTGC AGGCAATGATCTACC TERM 4279 3884014 - 3883986 - g 73 -9.5 -3.36492 | CTCGCAATTTTACAA CCCATCTTGCAGC TCA ACAGCATGATGGG ATAACCCGAATTATC yst1F 3882801 - 3884018 + | general secretion pathway protein F yst1G 3884050 - 3884517 + | general secretion pathway protein G precursor yst1H 3884517 - 3885086 + | general secretion pathway protein H yst1I 3885092 - 3885454 + | general secretion pathway protein I precursor yst1J 3885451 - 3886050 + | putative general secretion pathway protein J precursor TERM 4280 3886475 - 3886433 - g 90 -2.7 -5.84011 | opp_overlap 3886454, overlap 3886454 AAGAAAAAAGAAAAA GAGAAGAAGAAGGAAACGG AAGAA CCATTGGCTCCTTATTCCC AACTGGTCTTTCAAC yst1K 3886040 - 3887077 + | putative general secretion pathway protein K TERM 4281 3887121 - 3887110 - g 79 -2.2 -5.48028 | TAAAGAAAAATAAAA CATC TTCC GACG AATTATTTATATCTC yst1L 3887079 - 3888278 + | putative general secretion pathway protein L yst1M 3888265 - 3888759 + | putative general secretion pathway protein M yst1O 3888768 - 3889553 + | type 4 prepilin-like proteins leader peptide processing enzyme yst1S 3889976 - 3889575 - | putative secretion protein TERM 4282 3891324 - 3891311 - g 80 -6.7 -4.70659 | opp_overlap 3891310 GTGCAGATTGAAAAA TCACC GGCG GGTGA AGTTTCAGCAACGGA ChiY 3890393 - 3891877 + | N-acetylglucosamine-binding protein A TERM 4283 3891929 - 3891908 - f 100 -15.9 -3.84674 | ACCGCATGATAACAA GAGGCAGGG GAAA CCCTGCCTC ACCCGTTTATACTCG TERM 4284 3893169 - 3893186 + G 72 -11.3 -2.66695 | overlap 3893168 3893165 3893171 ATCCGCTGGGGCATT GATGCCC ATAT GGGCATC CTGTTTGGTGCCGCC YE3577 3892116 - 3893495 + | hypothetical protein TERM 4285 3893541 - 3893519 - f 76 -7.7 -4.21812 | opp_overlap 3893519 TTTGATGGAAAATAA CGCTCTGAA GAGAG TTCAGGGCG TTTTAATCGCAATAG TERM 4286 3893519 - 3893541 + F 93 -9.9 -4.26076 | opp_overlap 3893519 TTTGATGGAAAATAA CGCTCTGAA GAGAG TTCAGGGCG TTTTAATCGCAATAG TERM 4287 3893923 - 3893905 - g 75 -5.3 -4.67353 | opp_overlap 3893905 3893899 CCACTTACTCAAAAA TACCCCT GCGAT AGAGGTA TTATTGTTGGATTAT YE3578 3893711 - 3894415 + | response regulator protein TERM 4288 3894518 - 3894544 + G 70 -2.2 -4.98436 | opp_overlap 3894512 3894511, overlap 3894519 TATTAATACTCACCC GGTGGTGAAATA TGG TATTTCCCCCCA TTTTTATCCTATTGA YE3579 3894393 - 3896750 + | sensor kinase protein YE3581 3897562 - 3897828 + | hypothetical protein TERM 4289 3898107 - 3898094 - g 70 -2.3 -4.95854 | opp_overlap 3898094 3898094 3898096 TAAAAAACTCAAAAA TGGCG ATAT CGTCA ATATTGATGTCGCTA map 3897825 - 3898610 + | methionine aminopeptidase YE3583 3899511 - 3898753 - | putative iron ABC transporter, ATP-binding protein YE3584 3900515 - 3899508 - | putative iron transport permease TERM 4290 3899996 - 3899982 - G 81 -10 -4.07678 | CTGCAAAACAGCAAA CTCTCC TGG GGAGAG TAGGCGCTGCATCAA YE3585 3901464 - 3900505 - | putative iron transport permease TERM 4291 3901117 - 3901104 - G 73 -3.7 -4.93296 | GTAGCAGCATAAAAA GTGCG GTAC CGCCC ATAGCAAAAACGGTC YE3586 3902427 - 3901474 - | putative iron transport protein YE3587 3903213 - 3902746 - | putative O-methyltransferase TERM 4292 3903554 - 3903593 + G 72 -5.7 -4.3129 | gap 1 TGCGGAAGAGCGCCT GGCTACGC-CCGAAGGTC GCAAA GACTTTTGGCGCGCAACC TTTTCGTGCTGGCTC YE3588 3903486 - 3904889 + | putative transporter protein TERM 4293 3905244 - 3905234 - g 83 -2.4 -5.52986 | ATGCGATTAAAAAAA CCGG CTA CCGC CCCAATGAGATTGCC YE3589 3905083 - 3906102 + | LacI family regulatory protein TERM 4294 3906460 - 3906431 - g 77 -8.5 -4.1552 | gap 1 CACTTTGGCAACAAA CACCGG-TGCCACC CTT GGTAGCTTCCGGCG CGCCGTTAGCGGCTC YE3590 3906127 - 3907197 + | putative hydrolase TERM 4295 3907938 - 3907994 + G 79 -10.7 -3.56727 | overlap 3907937 GCTTAGCTGCCGTGC TGCTGACCGCGACACTCGCCGCCACCG GTC TGGTGCCGCTGAATATCGCGCTCTGCA TTGTGATTGGTTCAA YE3591 3907361 - 3908980 + | putative Na+/Pi-cotransporter YE3592 3909587 - 3909060 - | isochorismatase family protein TERM 4296 3909724 - 3909709 - R 87 -5.4 -5.5112 | opp_overlap 3909703 3909709 CTTATCAATAAAAAA TCAGCC GATA AGCTGA TTTTTATTTAACCTT TERM 4297 3909709 - 3909724 + r 82 -4.7 -5.29846 | opp_overlap 3909709, overlap 3909703 CTTATCAATAAAAAA TCAGC CGATAA GCTGA TTTTTATTTAACCTT YE3593 3910331 - 3909765 - | hypothetical protein TERM 4298 3910105 - 3910089 - G 70 -2.2 -4.87803 | CACCGGGAAAGAAAA CTGCTG TTGCC CATCAG ATAATTTCAATTCAG TERM 4299 3910299 - 3910317 + g 71 -3.8 -4.7173 | AACAATAGCCAGTCG GGCAGTTG AAG CAAATGTC TTTTTCACTGTCATG TERM 4300 3910411 - 3910393 - R 100 -16 -3.80625 | TGGCGATAATCTAAA CCCTCCCC TTG GGGGAGGG TCAAAGACAGAATTG proP 3912011 - 3910509 - | proline/glycine betaine transporter TERM 4301 3911516 - 3911528 + g 71 -4.7 -4.54047 | opp_overlap 3911505 AATCCAGCCAACTGC CGAGG AAG CCACG TTTTCTGTCCGGTGA TERM 4302 3912252 - 3912195 - R 81 -7.3 -4.72333 | opp_overlap 3912200 3912202 3912203, overlap 3912196 3912198 3912200 AATCACAGCGAAAAA CCACATC-TTAGCGGAACCTGTCAGCT ATTTTG AGATGACAGGCCCCGCTAATGAT-TAA TGCTGTGGGTCTTTA TERM 4303 3912251 - 3912196 - R 71 -8.6 -3.42315 | opp_overlap 3912200 3912202 3912203, overlap 3912195 3912198 3912200 ATCACAGCGAAAAAC CACATC-TTAGCGGAACCTGTCAGCT ATTTTG AGATGACAGGCCCCGCTAATGAT-TA ATGCTGTGGGTCTTT TERM 4304 3912250 - 3912198 - R 86 -11.5 -3.27476 | gap 1, opp_overlap 3912200 3912202 3912203, overlap 3912196 3912195 3912200 CACAGCGAAAAACCA CATC-TTAGCGGAACCTGTCAGCT ATTTTG AGATGACAGGCCCCGCTAATGATT AATGCTGTGGGTCTT TERM 4305 3912248 - 3912200 - R 100 -14.1 -3.19102 | gap 1, opp_overlap 3912200 3912202 3912203, overlap 3912198 3912196 3912195 CAGCGAAAAACCACA TC-TTAGCGGAACCTGTCAGCT ATTTTG AGATGACAGGCCCCGCTAATGA TTAATGCTGTGGGTC TERM 4306 3912200 - 3912248 + r 76 -9.7 -3.25223 | gap 1, opp_overlap 3912200 3912198 3912196 3912195, overlap 3912202 3912203 CAGCGAAAAACCACA TC-TTAGCGGAACCTGTCAGCT ATTTTG AGATGACAGGCCCCGCTAATGA TTAATGCTGTGGGTC TERM 4307 3912202 - 3912245 + r 89 -12.5 -2.80988 | opp_overlap 3912200 3912198 3912196 3912195, overlap 3912200 3912203 GCGAAAAACCACATC TTAGCGGAACCTGTCAGCT ATTTTG AGATGACAGGCCCCGCTAA TGATTAATGCTGTGG YE3595 3915374 - 3912249 - | putative integral membrane efflux protein YE3596 3916589 - 3915387 - | putative drug efflux protein TERM 4308 3915619 - 3915629 + g 77 -8.2 -4.24002 | overlap 3915626 GCCGCAATCGGGATG GCGG TAA CCGC TTTTGCGGTTTCAGC TERM 4309 3916572 - 3916536 - G 77 -10.1 -3.54475 | opp_overlap 3916533 GCGCCGAGCACATAA GGCTCGCTGCACGTTAA GCA TTATCGTGTCGCGAACC CAATTTAGTGTAGAC YE3597 3917096 - 3919594 + | hypothetical protein YE3598 3920344 - 3919673 - | hypothetical protein TERM 4310 3920498 - 3920485 - R 76 -8.1 -4.16033 | opp_overlap 3920476 TTTAAATAATAACAA GCCTC CCAA GAGGC TCATAATTAATTTGA thiM 3921321 - 3920539 - | hydroxyethylthiazole kinase TERM 4311 3921485 - 3921433 - R 79 -11.2 -3.14931 | gap 1 CGCAGCCGCTATTAA TGCCTGCCCCAACGCCAGACCACCA TCAC CGGCAGGCAGGCGCTGGGGCAT-CA ATAACTGGAAATCAT hydA 3923685 - 3921409 - | hydrogenase maturation protein TERM 4312 3923703 - 3923714 + r 70 -5.8 -4.34789 | overlap 3923699 AAACTCCTTCGCAAG GCTG CCAG CAGC TTGTTTTATAGCTTG hypE 3924940 - 3923972 - | hydrogenase isoenzymes formation protein TERM 4313 3924722 - 3924705 - G 71 -9.1 -3.53452 | overlap 3924703 3924707 AAACCACAGGAAAGA TAGCGCG GAGT CGCGCCA CTGACCGCCACATCA TERM 4314 3924720 - 3924707 - G 73 -9.5 -3.32803 | overlap 3924705 3924703 ACCACAGGAAAGATA GCGCG GAGT CGCGC CACTGACCGCCACAT hypD 3926192 - 3925089 - | hydrogenase isoenzymes formation protein TERM 4315 3925408 - 3925437 + g 72 -5.7 -4.36914 | gap 1, overlap 3925412 3925414 TGCGCTAGCAGGTTG CCGCTGTCGG-GCA CAA TGCGCCGATATTGG TTTTCTACCGCACAA TERM 4316 3925932 - 3925919 - G 74 -6.7 -4.42788 | CGTAAGTGCAGAAAA TCACC TGTG GGTGA GCGGCAATTTCCAAA TERM 4317 3925994 - 3925982 - G 73 -10.5 -3.10493 | TCGGCAATACACACA CCGGG CAA CCCGG CCCGTGAACAAATTC hybG 3926463 - 3926179 - | hydrogenase 2 accessory protein HypG hypB 3927554 - 3926454 - | hydrogenase isoenzymes nickel incorporation protein hybF 3927916 - 3927575 - | hydrogenase nickel incorporation protein HybF TERM 4318 3927828 - 3927868 + g 71 -4 -4.66609 | overlap 3927832 GCGCCAATTTCCAGC CAGACCGCGG-TTATCCGTG TAG CACCGTTAAGCCGCGC-CTG TTTTTCAATCAGCTC hybE 3928427 - 3927909 - | hydrogenase 2-specific chaperone TERM 4319 3928181 - 3928150 - G 75 -5.1 -4.77165 | overlap 3928155 3928169 TCGCTGACAATAAAA CTAATGCTGCCGC AAGGAA GTGCCAGCATCAG GCGCTCCCCCACCGC TERM 4320 3928378 - 3928395 + g 83 -7 -4.71426 | TGGCCGAAAACCTGT TCCAGC AATGCC GCTGGA TTTTGTTCATGACCG hybD 3928911 - 3928420 - | hydrogenase 2 maturation endopeptidase TERM 4321 3928839 - 3928825 - G 83 -11.4 -3.59979 | CGGTGGGATGTGAAA GCGCTG CTC CAGCGC TTCAACAATTCGCAC hybC 3930605 - 3928911 - | hydrogenase 2 large subunit hybB 3931776 - 3930583 - | putative hydrogenase 2 b cytochrome subunit TERM 4322 3931512 - 3931496 - G 71 -5 -4.56702 | overlap 3931498 GCGTAACCAAACAAA CTGGCG AGTAG CGCCGG GCGCACCAGCGGGTG TERM 4323 3931749 - 3931763 + g 75 -11.4 -2.71325 | opp_overlap 3931743, overlap 3931747 3931746 GCCAACTGACCAGCC GCCCAC CCA GTGGGC TGGATTTATGCATCG hybA 3932797 - 3931769 - | hydrogenase 2 protein HybA TERM 4324 3932438 - 3932453 + g 75 -5.4 -4.8048 | opp_overlap 3932438 ACAGTTAGGATCAAC GCAGTG CATG CATTGC TTTTTGATATAGGCG hyb0 3933915 - 3932800 - | hydrogenase 2 small subunit TERM 4325 3933899 - 3933917 + g 74 -3.1 -5.08169 | opp_overlap 3933885, overlap 3933900 3933906 TCACGACGGTTAACG CCATGCT GGGAA AGCATGC TTTTTTCCCCTGTAT TERM 4326 3934278 - 3934256 - H 87 -5 -5.4182 | AACTAGAAACAAAAA TTTCACTTTC ATA AAAAATGAAA TGAGAAAAATTCGTA pcpY2 3934620 - 3935087 + | outer membrane lipoprotein TERM 4327 3935535 - 3935546 + T 75 -3 -5.1356 | opp_overlap 3935535 AATTAAGATTAATAA TTTC ACAG GAAA TTTTTCTTCCTAACA TERM 4328 3935884 - 3935907 + T 70 -5.3 -4.52589 | TCAAACTTGTTTCAG CTTTACTGG AACATA CCGGTGAAG TTTTATCTCGCGAAC TERM 4329 3936589 - 3936569 - T 86 -11.9 -3.16564 | opp_overlap 3936568 3936567 3936572, overlap 3936572 TGGCGAGGTGATTAA GAACGGTGC TCA ACACCGTTC GCTTTAAAATTAGCG TERM 4330 3936586 - 3936572 - T 70 -7.8 -3.7282 | opp_overlap 3936568 3936567 3936572, overlap 3936569 CGAGGTGATTAAGAA CGGTGC TCA ACACCG TTCGCTTTAAAATTA TERM 4331 3936632 - 3936599 - T 100 -13.3 -4.07568 | opp_overlap 3936610 CCGTTCGCTTTAAAA TTAGCGGGGAATGTC GCAT GACATTCTCCACTAA CGTCAGATACGAGAT TERM 4332 3936946 - 3936960 + T 91 -7.8 -4.82901 | GAACGCTTTCTGTAT CAGCGG GTT CTGCTG TTTTTCTGAAGAAAC TERM 4333 3937350 - 3937405 + T 72 -7.8 -3.76885 | gap 2, opp_overlap 3937356, overlap 3937349 TATACTTGGCGAGCA GGCAAAGAGGTGATCTCCTTGAATTG GTTGCA CAAT-C-AGTAGAACACCTCTATGCC TGTCTTTTTTTCACC YE3614 3938543 - 3937695 - | putative lipase/acylhydrolase TERM 4334 3938412 - 3938426 + g 71 -2.8 -4.88407 | opp_overlap 3938412 TACGGCCACAAAATT TTTCGC TAA GCAAAA TTTTTCATTGGATAA TERM 4335 3939426 - 3939396 - R 100 -14 -4.70515 | opp_overlap 3939395 3939394, overlap 3939397 TATAGCTAAAAGAAA GCACCCCGCCAGCA TCT TGCTAGCAGGGTGA CAGTTATTTAAATTA TERM 4336 3939425 - 3939397 - R 100 -17.5 -3.41224 | opp_overlap 3939395 3939394, overlap 3939396 ATAGCTAAAAGAAAG CACCCCGCCAGCA TCT TGCTAGCAGGGTG ACAGTTATTTAAATT YE3615 3941022 - 3939448 - | putative methyl-accepting chemotaxis protein TERM 4337 3941020 - 3941037 + g 93 -4.8 -5.57888 | opp_overlap 3941020 ATGTTTTAGAAAATT CACGGG AATACC CCTGTG TTTTATTTTTTTAGT TERM 4338 3941596 - 3941559 - R 77 -10.6 -3.18582 | overlap 3941563 TATTTTATTCATTAA TCCACTGCCAAGTGCA GGGCAA TGCACTTGGCAGCGTT AAGCCCAGGATCAGT TERM 4339 3941592 - 3941563 - R 100 -16.6 -2.57244 | overlap 3941559 TTATTCATTAATCCA CTGCCAAGTGCA GGGCAA TGCACTTGGCAG CGTTAAGCCCAGGAT YE3616 3942600 - 3941617 - | hypothetical protein TERM 4340 3941961 - 3941944 - G 71 -8.5 -3.78934 | TTTCGGCGATAACAA CCACAAA GATG TTTGTGG ACTCACCGGGCAAAT YE3617 3943937 - 3942627 - | putative membrane transport protein TERM 4341 3944495 - 3944507 + H 86 -9.1 -4.39226 | overlap 3944493 ATATTGCCGGGGCTG GGCCT TTT AGGCC TTATTTTCTGCTTGT TERM 4342 3944818 - 3944801 - g 74 -2.7 -5.15969 | GCCCAAGCTAAAAAA CTGGT GCCGATAT ACCAG ACAGAGCCGAATGCG fepB 3944627 - 3945478 + | iron-enterobactin transporter periplasmic binding protein TERM 4343 3946037 - 3946047 + G 73 -5.4 -4.49389 | opp_overlap 3946031 3946037 GGGCGAACACAGCAA TGCT GAC AGCA TTTTAATTCTGGAGT fepD 3945828 - 3946898 + | iron-enterobactin transporter membrane protein TERM 4344 3947548 - 3947569 + GF 93 -12.3 -3.14211 | AGTGATGTTTATTGC CATCGCCGC CGTG GTGGCGATG TTACTGAGCCGCCGT fepG 3946895 - 3947938 + | iron-enterobactin transporter permease fepC 3947905 - 3948753 + | iron-siderophore transport system, ATP-binding component fes 3950199 - 3948823 - | enterobactin/ferric enterobactin esterase YE3623 3950296 - 3950379 + | hypothetical protein TERM 4345 3951263 - 3951273 + F 91 -8.2 -4.67038 | GGTAATAATAGCCTG GCGG AAA CCGC TTTTGATTTTGGCGG TERM 4346 3952814 - 3952841 + F 100 -9.8 -4.46212 | overlap 3952810 AACTTTCACTTTCAG CCGCGCCGGT TGATATAT GCTGGCGCGG TTTTATCCTAACGAA YE3626 3953098 - 3953511 + | hypothetical protein YE3627 3953586 - 3953975 + | hypothetical protein TERM 4347 3954132 - 3954156 + G 100 -15.8 -3.49475 | GGATCAGGCGCTGGT CTCGGCAGAG CGCTA CTCTGCCGAG TTATCTGCGAATCAG YE3628 3953989 - 3955287 + | outer membrane efflux protein TERM 4348 3955911 - 3955900 - g 85 -5.8 -5.02074 | GCAGTGTCGAAAAAA GTGG CCAG CCAC AAACTCGGGTGACAC TERM 4349 3956528 - 3956498 - g 75 -11.8 -2.71924 | opp_overlap 3956497, overlap 3956497 TACCCTGCCGCAAAT GGCTGACACCCCAG AAC CCCAGGTGCCAGCC GTTGATAACACCACA YE3629 3955284 - 3956813 + | putative efflux system protein TERM 4350 3957923 - 3957937 + G 81 -7.8 -4.51812 | overlap 3957915 ATCACCCTGCCCCTT GGCATC CTT GGTGCC TTTATTGTTATGCAC TERM 4351 3958122 - 3958156 + G 73 -7.1 -4.27796 | gap 1, opp_overlap 3958142, overlap 3958154 ATTATTGGCGCATTT CAGAGCAGGCGGCGAT TGAA GTCGGC-CCGGCTCTG TTTTGCAGTTTATTG TERM 4352 3959508 - 3959521 + G 71 -4.5 -4.4959 | overlap 3959509 3959514 ATGCCGCTTTGATTA TGGCA ACCC TGCCG TTTTCCTTGATTGGC TERM 4353 3959582 - 3959593 + G 73 -7.2 -4.2528 | AACTTTTCAGTGGCT GCCG CAGT CGGC TTTATTGCGTTGGCG YE3630 3956810 - 3959941 + | putative cation efflux system protein TERM 4354 3959962 - 3959992 + T 78 -7.5 -4.54404 | opp_overlap 3959962 AAAAGTATTACTATA GCCCTGCGTTCTG GTTTG CAGGAGTCAGGGC TTTATTATTGATTTC aidD 3960673 - 3960008 - | alkylated DNA repair protein YE3632 3961220 - 3961819 + | membrane protein flp 3962020 - 3962214 + | pilin protein, major subunit TERM 4355 3962238 - 3962260 + F 100 -12 -3.99275 | opp_overlap 3962240 AACTCATCTTCTCAA CACGGCAGTG CCC TGCTGCCGTG TTTAATCTTATATCA tadV 3962286 - 3962708 + | putative tight adherance operon protein TERM 4356 3962877 - 3962845 - g 80 -2.7 -5.43866 | overlap 3962847 TAATGGTCAAAAAAA TACCCAGGACTCAAC CGA ATTGAATCGCGAGCA AGATACCAATATTGC rcpC 3962753 - 3963586 + | putative tight adherance operon protein rcpA 3963583 - 3964944 + | putative tight adherance operon protein TERM 4357 3965397 - 3965412 + G 70 -2.5 -4.93661 | CGGCCATCAACATTC CTGAC CAAACC GTCGG TTTTATTATTGATAT tadZ 3965213 - 3966331 + | putative tight adherance operon protein tadA 3966363 - 3967637 + | putative tight adherance operon protein TERM 4358 3968322 - 3968309 - g 88 -2.3 -5.86965 | ACTGAGCAAAAAAAA GCGGT GATG ACGGC ACAGATACGGATGTC tadB 3967673 - 3968515 + | putative tight adherance operon protein TERM 4359 3968595 - 3968583 - g 85 -2.7 -5.67529 | AAGCAAAAACAAAAA TGACA ATA TATCA ATCTACAATAAAATA tadC 3968512 - 3969336 + | putative tight adherance operon protein tadD 3969323 - 3970090 + | putative tight adherance operon protein tadE 3970095 - 3970559 + | putative tight adherance operon protein tadF 3970543 - 3971121 + | putative tight adherance operon protein tadG 3971157 - 3972536 + | putative tight adherance operon protein TERM 4360 3972583 - 3972534 - T 77 -4.6 -5.04987 | gap 3, opp_overlap 3972539 3972547, overlap 3972538 3972546 3972549 AATACTCCCAAAAAA TAATCTCCAATATCAGGCGCGGTAA CAA TAACCGCGCCTG-T-TTC-AGATTA TTTTGCGCCGCCCGC TERM 4361 3972574 - 3972546 - T 95 -13.1 -3.08349 | opp_overlap 3972539 3972547, overlap 3972538 3972534 3972549 AAATAATCTCCAATA TCAGGCGCGGTAA CAA TAACCGCGCCTGT TTCAGATTATTTTGC TERM 4362 3972547 - 3972573 + T 100 -16.6 -3.75845 | opp_overlap 3972546 3972538 3972534 3972549, overlap 3972539 AATAATCTCCAATAT CAGGCGCGGTAA CAA TAACCGCGCCTG TTTCAGATTATTTTG TERM 4363 3972571 - 3972549 - T 93 -13.4 -2.74999 | opp_overlap 3972547 3972539, overlap 3972546 3972538 3972534 TAATCTCCAATATCA GGCGCGGTAA CAA TAACCGCGCC TGTTTCAGATTATTT YE3645 3973006 - 3972581 - | biopolymer transport protein ExbD TERM 4364 3972676 - 3972708 + g 85 -7.8 -4.70117 | gap 1, opp_overlap 3972676 3972675 TCAGAGTTTCATAAT CCACCA-CTTTATCC GCCT GGAAGAAGATGGTGG TTTCTTTATTAGATT YE3646 3973723 - 3973010 - | MotA/TolQ/ExbB proton channel family protein TERM 4365 3973966 - 3973987 + H 79 -8.1 -4.39414 | gap 1 CCATCGCGCCTTTCA TCATTCG-GC CTT GCACGAATGA TTTATCTTTAATCTT TERM 4366 3974667 - 3974648 - g 73 -10 -3.30199 | overlap 3974646 3974645 GAAAGCGAAAAAGCA TGCCACGA TTAA TCGCGGCA ATGGTGAGTTATTCT TERM 4367 3975430 - 3975446 + G 73 -2.1 -5.13343 | overlap 3975432 ACCAACGAGATTTTA CTGGCTG CAA TGGCCTG TTTTCTTTTGAATTA metC 3974502 - 3975713 + | cystathionine beta-lyase TERM 4368 3975736 - 3975766 + F 72 -9.9 -2.7535 | gap 1, overlap 3975740 GAGTGATAGGGTTTG TTAATGCGC-GGTG ACAA TACCTGCGCATTAA TCCTCTCTTACACAA YE3648 3975920 - 3976582 + | DedA family membrane protein TERM 4369 3976606 - 3976622 + T 78 -7.2 -4.56358 | opp_overlap 3976606 3976607, overlap 3976607 GCTCGAACCGCTAAA TGGCGC TCAGT GCGCCG TTTTATGTAGGTATC YE3649 3977534 - 3976641 - | AraC family transcription regulator YE3650 3977977 - 3980016 + | hypothetical protein TERM 4370 3980058 - 3980084 + F 100 -9.5 -5.26316 | opp_overlap 3980058 TGGGAATCAATTAAA CGGACAGATAA ATTTA TTTTCTGTCCG TTTTTTATGCACTGC TERM 4371 3980084 - 3980058 - f 83 -9.5 -4.00348 | opp_overlap 3980058 TGGGAATCAATTAAA CGGACAGATAA ATTTA TTTTCTGTCCG TTTTTTATGCACTGC YE3651 3980364 - 3981521 + | putative iron-containing alcohol dehydrogenase TERM 4372 3981706 - 3981677 - f 100 -13.7 -3.09289 | opp_overlap 3981664 CACTACCCCAAGACA TCACAGTTGTAGG CTTT CCTGCAACTGTGA ATACGAAGGGTACGT dkgA 3981740 - 3982573 + | 2,5-diketo-D-gluconate reductase A YE3653 3984878 - 3982575 - | hypothetical protein TERM 4373 3982625 - 3982645 + g 100 -11.1 -4.70169 | CGGAAGGTTTATTCA CCGGCGC TCTGTTT GCGCCGG TTTTATTGCCTGTCG TERM 4374 3982825 - 3982841 + g 71 -8.7 -3.62597 | overlap 3982800 3982828 TGCTGACGATACGCC CGACGTG CTT CACGTTG TTCTTCCAGCGTAGG TERM 4375 3984186 - 3984196 + g 76 -8.2 -4.11216 | CACACCACTCCAGCC CGGC AAT GCCG TTTTGCGCATCACCA TERM 4376 3984810 - 3984798 - G 71 -4.8 -4.61633 | AGACATCGGTAAAAA TGGC GCTGT GCCA TAGCATTCAGCCCAA sufI 3986489 - 3985062 - | repressor protein for FtsI parF 3987383 - 3986652 - | putative acyltransferase TERM 4377 3987540 - 3987522 - R 75 -8.8 -3.60627 | opp_overlap 3987518 TGATGTTACGCGAAA GCGCGC GAATGAT GCGCGC TCCCTGTTACATTAA parC 3989841 - 3987565 - | DNA topoisomerase IV subunit A TERM 4378 3988612 - 3988629 + g 71 -6.9 -4.23723 | opp_overlap 3988606 3988613, overlap 3988613 TTCAGAAATCGCGAA ACGCTGC ATCA GCAGCGG TTTTGGCTCATCTTC TERM 4379 3988613 - 3988628 + g 73 -10.4 -3.13511 | opp_overlap 3988606 3988613, overlap 3988612 TCAGAAATCGCGAAA CGCTGC ATCA GCAGCG GTTTTGGCTCATCTT TERM 4380 3988628 - 3988613 - G 79 -10.4 -3.65426 | opp_overlap 3988612 3988613, overlap 3988606 TCAGAAATCGCGAAA CGCTGC ATCA GCAGCG GTTTTGGCTCATCTT TERM 4381 3989052 - 3989088 + g 70 -2.2 -5.00616 | gap 1, overlap 3989055 3989056 3989057 TAGCGCCAGAAACCT GATG-CGGTAGTGCAGT GATG ACCGCACTGCCATCTTC TTTTTTCCACAAGGC TERM 4382 3989264 - 3989248 - G 75 -10.1 -3.39895 | overlap 3989230 3989253 TGGCTTATCAATCAA CGCAAGC ACC GCCTGCG CAATTTCTCGCACGT mda66 3990153 - 3990746 + | putative modulator of drug activity YE3658 3990779 - 3991084 + | hypothetical protein crgA 3992027 - 3991110 - | LysR family regulatory protein nfxD 3993943 - 3992048 - | DNA topoisomerase IV subunit B TERM 4383 3992756 - 3992770 + g 73 -3.4 -5.00616 | overlap 3992755 3992758 TTTACCGGGCAGTGC CGGGCC GCT GGTCAG TTTTTTACGCACCAC TERM 4384 3993992 - 3994015 + r 74 -10.3 -2.62735 | gap 1, overlap 3994010 3994012 CTAGCGGCGATATGC CCGACAGGCC ATAAC GGCCTG-CGG TACTCTACCCGCTGT YE3661 3994642 - 3994058 - | esterase YqiA TERM 4385 3994561 - 3994585 + g 83 -11.5 -3.53811 | overlap 3994555 GGGGATGGTGTTGCT GCAACCAACTT TTG AAGGTGGTTGC TTTGGCCGAGCTGGG icc 3995466 - 3994639 - | cyclic 3',5'-adenosine monophosphate phosphodiesterase YE3663 3995971 - 3995546 - | hypothetical protein nudF 3996615 - 3995983 - | ADP-ribose pyrophosphatase NudF tolC 3996933 - 3998414 + | outer membrane channel protein TERM 4386 3998432 - 3998465 + F 91 -3.8 -5.8187 | gap 1, overlap 3998435 TTTACGCGATTGGAC TCA-CCGGGCATAGC ATCAA GCCGTGCCCGGTTTA TTTTTTTATTCCCTC TERM 4387 3998435 - 3998461 + F 100 -11.5 -5.33131 | overlap 3998432 ACGCGATTGGACTCA CCGGGCATAGC ATCAA GCCGTGCCCGG TTTATTTTTTTATTC TERM 4388 3998529 - 3998516 - f 82 -4.5 -5.26875 | TCGGCAATGAAAAAA GCGAA CTTA CTCGC AGCATTTCGTATAGC TERM 4389 3998640 - 3998626 - f 70 -7.8 -3.57971 | ACACTTACTGGGAAA GGGCAT TGA ACGCCC GGAAATGAGACAAAT YE3666 3998660 - 3999349 + | hypothetical protein YE3667 3999360 - 4000520 + | hypothetical protein YE3668 4001475 - 4000693 - | hypothetical protein TERM 4390 4001682 - 4001644 - R 72 -7.5 -4.02571 | gap 1, opp_overlap 4001644 GAAGGCACGAAATAA CCGGGCAGCGATCTATTC AATA GAATA-ATGGCAACCCGG TGTGTAAACCACGTT TERM 4391 4001879 - 4001898 + r 82 -3.4 -5.47159 | opp_overlap 4001855 ATATCAGTCGATATT GCCATCAG AAAT CAGCTGGC TTTTTTCTCTTGAGA ribB 4002543 - 4001890 - | 3,4-dihydroxy-2-butanone 4-phosphate synthase YE3671 4003009 - 4003308 + | hypothetical protein TERM 4392 4003331 - 4003348 + T 100 -10.5 -4.61633 | overlap 4003344 4003345 CGTTTATTACGATTG GGGTGCC ATCT GGCGCCC TTTTTAGGGCTGTAT asoB 4004596 - 4003352 - | inner membrane protein YjeH rfaE 4006179 - 4004749 - | bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase TERM 4393 4005172 - 4005189 + g 75 -3.3 -5.17576 | gap 1, overlap 4005167 TTTTTCACCACGCTG GCGG-GCC TGA GCCACCGC TTTTTTCAGTTGCTG glnE 4009282 - 4006430 - | bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase TERM 4394 4006941 - 4006911 - G 73 -9.6 -3.39727 | opp_overlap 4006926, overlap 4006909 CAACCATAGACAATA CGCGCGCGCACCAG CGC CTGATGCTCCCACG TCCAGGCTTCATTTT TERM 4395 4008621 - 4008642 + g 73 -8.8 -3.82665 | AGGCGCATATCTACC CGATAGAC AAAGCC GTCTATCG TTTGCTGGTCTAATG YE3675 4010752 - 4009427 - | hypothetical protein TERM 4396 4010713 - 4010700 - G 74 -9.5 -3.53091 | overlap 4010664 ATTCGCTCTGGCAAA GCGGC AATG GCCGC AGGTGTAGCAATAAA TERM 4397 4010787 - 4010797 + H 79 -6.8 -4.60889 | TGTTGTGAGATTATG GGCA TTA TGCC TTTTTCGCGGTGATT YE3676 4011077 - 4011697 + | putative signal transduction protein cca 4011864 - 4013108 + | multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase TERM 4398 4013148 - 4013132 - T 93 -4.4 -5.86976 | gap 1, opp_overlap 4013126 4013132 4013134 CGATAAAACAAAAAA GCCCTGA TTGT TC-GGGC TTTTTATATTCTGCT TERM 4399 4013132 - 4013148 + T 78 -4.4 -5.16133 | gap 1, opp_overlap 4013132, overlap 4013126 4013134 CGATAAAACAAAAAA GCCCTGA TTGT TC-GGGC TTTTTATATTCTGCT bacA 4014116 - 4013298 - | undecaprenyl pyrophosphate phosphatase TERM 4400 4014182 - 4014160 - R 100 -7.7 -6.58542 | opp_overlap 4014160 GTCCAAAAAAAAAAA CGGCAATGT GAGAA ACAGTGCCG TTCAATTTCTGTATG folB 4014637 - 4014278 - | bifunctional dihydroneopterin aldolase/dihydroneopterin triphosphate 2'-epimerase TERM 4401 4015363 - 4015352 - g 83 -2.2 -5.56112 | AGAAAAAGCAAAAAA CTCC CGCT GAAG AAGCCGCAGAGTTGG YE3680 4014745 - 4015398 + | putative glycerol-3-phosphate acyltransferase PlsY gcp 4016566 - 4015553 - | O-sialoglycoprotein endopeptidase TERM 4402 4015948 - 4015938 - G 73 -3.2 -4.85599 | TTCAGGCCAGAAAAA CTGA AAT CCAG GCCGGGACGATCAGT rpsU 4016940 - 4017155 + | 30S ribosomal protein S21 TERM 4403 4017256 - 4017229 - f 76 -11.2 -2.55668 | opp_overlap 4017229, overlap 4017228 TAGTTGCATACGAAG GCCGTGCTTTCC GAAA GGAATGCGCGGC TTGTTCTCGTTTATG TERM 4404 4017229 - 4017256 + F 100 -13.4 -3.94823 | opp_overlap 4017229 4017228 TAGTTGCATACGAAG GCCGTGCTTTCC GAAA GGAATGCGCGGC TTGTTCTCGTTTATG TERM 4405 4018287 - 4018299 + G 71 -4.8 -4.56791 | CTATCTAAATGATGG GCGT CAGCT ACGC TTTATGTTTTTGCCT dnaG 4017292 - 4019040 + | DNA primase TERM 4406 4019088 - 4019069 - f 81 -9.3 -3.87869 | TTAATTGCCGATAAA TGTGGGG GCAAAT CCCCACA ATATGCCGTCATGGC TERM 4407 4020318 - 4020308 - g 71 -8.2 -3.75332 | overlap 4020309 ATCGGTGAAGCGAAA GCGC GTC GCGC CAAGAAAGAAATGGT alt 4019198 - 4021036 + | RNA polymerase sigma factor RpoD TERM 4408 4021061 - 4021088 + T 100 -12.8 -4.62471 | opp_overlap 4021061 4021067, overlap 4021067 GCCGTGACAAGCACA CAAAAACCCCGG CATG CCGGGGTTTTTC TTTTTGGCCATTCAG TERM 4409 4021088 - 4021061 - T 95 -12.8 -2.96274 | opp_overlap 4021061 4021067, overlap 4021067 GCCGTGACAAGCACA CAAAAACCCCGG CATG CCGGGGTTTTTC TTTTTGGCCATTCAG TERM 4410 4021067 - 4021082 + T 100 -11.8 -5.61881 | opp_overlap 4021061 4021067, overlap 4021061 ACAAGCACACAAAAA CCCCGG CATG CCGGGG TTTTTCTTTTTGGCC TERM 4411 4021082 - 4021067 - T 100 -11.8 -5.05079 | opp_overlap 4021067 4021061, overlap 4021061 ACAAGCACACAAAAA CCCCGG CATG CCGGGG TTTTTCTTTTTGGCC TERM 4412 4021317 - 4021368 + T 93 -12.1 -3.67564 | gap 2, opp_overlap 4021327 4021330, overlap 4021330 GTCCAGTAGGGGCCA CCAAATAAAACAAGGAGTTAGATGA GAAA TCGTCTGACTCC-T-TTTTATTTGG TTTAAATGCGTGATT TERM 4413 4021360 - 4021327 - T 78 -5.3 -4.93877 | opp_overlap 4021317 4021330, overlap 4021330 GGCCACCAAATAAAA CAAGGAGTTAGATGA GAAA TCGTCTGACTCCTTT TTATTTGGTTTAAAT TERM 4414 4021330 - 4021357 + T 100 -11.4 -5.41941 | opp_overlap 4021327 4021330, overlap 4021317 CACCAAATAAAACAA GGAGTTAGATGA GAAA TCGTCTGACTCC TTTTTATTTGGTTTA TERM 4415 4021357 - 4021330 - T 76 -7 -4.56436 | opp_overlap 4021330 4021317, overlap 4021327 CACCAAATAAAACAA GGAGTTAGATGA GAAA TCGTCTGACTCC TTTTTATTTGGTTTA YE3685 4022794 - 4021463 - | hypothetical protein TERM 4416 4022870 - 4022907 + r 72 -9.3 -3.17714 | gap 1 TATGTCTCAACTCTA CAGCC-CAAAACCAAAAA TTA TTGCTGGTTTTGTGGCTG TTAGTCCAGGTTTGC YE3686 4023932 - 4022847 - | hypothetical protein YE3687 4025827 - 4023950 - | glycosyl hydrolase family protein TERM 4417 4024503 - 4024523 + g 78 -5.5 -4.91873 | overlap 4024495 TTTTGTGGCTTTACT TGATAAGGT AAA ACATTATCA TTTTTGATTAGTGTG TERM 4418 4025074 - 4025086 + g 78 -9.1 -3.9777 | GTTTCAGTTCGACTT GCTGC CAT GCAGC TTTATCAATATTGAC YE3688 4027015 - 4026155 - | transcriptional regulator TERM 4419 4027170 - 4027185 + H 72 -7.6 -3.7791 | opp_overlap 4027165 TAGAATAGATTTTAC CGTGAT ATAC ATCACG TTTAATAAATAATTA murQ 4027243 - 4028151 + | N-acetylmuramic acid-6-phosphate etherase TERM 4420 4028750 - 4028774 + G 73 -4.9 -4.67651 | TGGCGGAACAGGGGT CAACGGCGCAA TTA TCGCTTCGTTG TTTATTTTACGCTAT murP 4028154 - 4029605 + | N-acetylmuramic acid phosphotransfer permease YE3691 4030596 - 4029655 - | glutaminase TERM 4421 4030088 - 4030071 - G 71 -6.3 -4.1822 | gap 1, opp_overlap 4030070, overlap 4030074 CCTGAGCCGAATAAA GCAGCCAT GCA ATGGC-GC GATTGTGAAAATTGG YE3692 4032222 - 4030666 - | putative amino acid permease TERM 4422 4031585 - 4031571 - G 83 -6.4 -4.97957 | overlap 4031573 4031574 CATAGAACAAGAAAA TACTGG CGG CCAGCA CCACATTATCAAAGT gadA 4033696 - 4032296 - | glutamate decarboxylase YE3694 4034479 - 4034021 - | putative transcriptional regulator YE3695 4034588 - 4035826 + | putative transporter protein TERM 4423 4036439 - 4036453 + G 72 -5.7 -4.46212 | overlap 4036427 GATTGAGATGCTGTT CAGCT CATTT AGCTG TTTTATGGTCGCGGG YE3696 4035918 - 4036490 + | acid-resistance membrane protein TERM 4424 4036504 - 4036528 + F 95 -12.9 -3.08639 | AATTCTTCTCCCTGA GCGGTATCGTG GGC TGCGATACCGC TGTCTTGGAAATATT YE3697 4036643 - 4037542 + | hypothetical protein TERM 4425 4038720 - 4038730 + G 73 -5.4 -4.56597 | CTGCAATCAGGCCTG TCTG GAT CAGA TTTTTGACGGCAAGC TERM 4426 4039041 - 4039061 + G 80 -9 -4.2717 | opp_overlap 4039034 GTTGAATACCCCAGT TCAGCCGG AGCAA CTGGCTGA TTTTGATGAAGTGAT fadH 4037692 - 4039713 + | 2,4-dienoyl-CoA reductase TERM 4427 4039753 - 4039727 - T 85 -7.2 -4.7871 | overlap 4039743 AAGCATGAGCAAAAA GCGGGAAGTG TAAATAC CACGCCCCGC AGCTTTAGACCCAAA TERM 4428 4039996 - 4039986 - T 71 -3.2 -4.95876 | AAGGATAATTAAAAA TCGC TGT ACGA CATATCCAGACTACC YE3699 4041169 - 4039979 - | putative methyltransferase TERM 4429 4041083 - 4041107 + g 85 -7.9 -4.77165 | ATATTCATCTGCTGC TTCCCATGCCT GTA AGGTATTGGAA TTTTCTTGTGGCGGG YE3700 4041668 - 4043575 + | beta-barrel outer membrane protein YE3701 4043817 - 4044320 + | hypothetical protein YE3702 4044392 - 4045393 + | MocA family oxidoreductase TERM 4430 4045553 - 4045541 - f 76 -10.5 -2.90813 | opp_overlap 4045544, overlap 4045538 TACGGTGCGAAAGCA CCCGG TTA CCGGG CAACCTCATTAATGT TERM 4431 4045653 - 4045670 + F 80 -9.1 -3.91084 | opp_overlap 4045651 GAGTTGTAAGTGAGA CCTTGCC GGAA GGCGAGG TTTGCTTGCAGCTCA TERM 4432 4045693 - 4045718 + F 100 -11.1 -5.69262 | GCAGCTCAGACATAG CGGCTGGCGTC TTCC GACGTTGGCCG TTTTTGTTTTTATGA YE3703 4045743 - 4046729 + | putative drug efflux protein TERM 4433 4046754 - 4046776 + F 88 -9.8 -4.10781 | opp_overlap 4046754 CGATACAATATATTA TGTGGGGCGG TTA TTGCCCCGCA TTTATCTCGCTTATT TERM 4434 4047024 - 4047012 - f 91 -6.3 -5.43553 | AGGCAAAAAATAAAA CAAGT TTA ACTTG GGAAGAGGTATCACT YE3704 4047047 - 4048303 + | serine/threonine transporter SstT TERM 4435 4048326 - 4048345 + T 100 -12.1 -4.66418 | opp_overlap 4048325 4048322 TATCGAGATAACTAT CGGGGGC AATTTG GCCCCCG TTTCTTATTATTTTG YE3705 4048889 - 4048353 - | hypothetical protein TERM 4436 4049036 - 4049022 - R 80 -3.6 -5.28176 | CTTATTCATAAAAAA TAAAAC ACC GTTTCA TATTAATCAAAAGAC uxaA 4050549 - 4049059 - | altronate hydrolase TERM 4437 4049992 - 4050019 + g 71 -10.6 -2.84962 | overlap 4049988 4049987 4049991 4049990 ACCAGCATTGGGGTG GCGCACCATGTT TTGC AGCATGGTGCGG GTATTTTCGTGATCC uxaB 4052011 - 4050560 - | altronate oxidoreductase TERM 4438 4052091 - 4052073 - R 100 -14.6 -3.36671 | opp_overlap 4052070 4052068 ATGTTAATGTTATAA GGGGCTGA TAT TCAGCCCC GAGATTGTTATTAGC uxaC 4053542 - 4052133 - | glucuronate isomerase TERM 4439 4054044 - 4054001 - H 84 -9.7 -3.74693 | gap 1, opp_overlap 4054004 TCGGATTGGACCAAA TTGC-GCCATGAAACGTCAC GACAG GCGGCGTTTCATGGCAGTAA TCTAAGACTGGGAGA TERM 4440 4054004 - 4054041 + H 80 -11.4 -2.62983 | gap 1, opp_overlap 4054001 GATTGGACCAAATTG C-GCCATGAAACGTCAC GACAG GCGGCGTTTCATGGCAG TAATCTAAGACTGGG TERM 4441 4054257 - 4054267 + G 71 -8.2 -3.7697 | opp_overlap 4054257 TACACCCTAATGCAA CCGG TAG CCGG TTATATTCTGGATGT exuT 4054068 - 4055372 + | ExuT transport protein TERM 4442 4055407 - 4055427 + F 100 -10.4 -5.24129 | opp_overlap 4055401 4055404 TTGTAGACATCACCA GCCCGGTA AAATC TGCCGGGC TTTTTTATACCCGCC exuR 4055612 - 4056406 + | DNA-binding transcriptional repressor ExuR YE3711 4056638 - 4057153 + | putative lipoprotein yqjA 4057347 - 4058039 + | DedA family membrane protein YE3713 4058036 - 4058425 + | hypothetical protein TERM 4443 4058421 - 4058407 - f 77 -8.6 -4.06419 | opp_overlap 4058406 CGCCTTCAGAAACAA CCTACA AAA TGTAGG GTAATCTGCATCATG TERM 4444 4058432 - 4058455 + F 72 -7.4 -3.97812 | overlap 4058435 GTAGGGTAATCTGCA TCATGGGGAG TTAT CTCCCCGTCA TTTGATCTTCGTTAT YE3714 4058665 - 4058997 + | hypothetical protein yqjD 4059122 - 4059427 + | hypothetical protein TERM 4445 4059717 - 4059695 - g 85 -12 -3.28924 | CATTGGGGTCGACAA CGGCAGTGCT CTT AGCACTGGCG ATAATAGGTGTTATC YE3716 4059430 - 4059825 + | hypothetical protein YE3717 4059822 - 4060106 + | hypothetical protein TERM 4446 4060502 - 4060476 - f 74 -4.5 -4.84359 | gap 1 TGACGGGTATAAAAA TTAACGCC-AGC AGAT GCCAGGCATTAA TACAAAACACTTTTT YE3718 4060558 - 4060926 + | hypothetical protein TERM 4447 4060962 - 4060988 + F 95 -8.1 -5.24129 | gap 1, opp_overlap 4060962 4060964 4060965, overlap 4060965 TGCGATTTTAATGAA TAGCGCCCTATC ATTA GATGGGGCG-TA TTTTTTATAGAGGAA TERM 4448 4060986 - 4060965 - f 70 -10.1 -2.54574 | opp_overlap 4060962 4060965, overlap 4060964 4060962 GATTTTAATGAATAG CGCCCTATC ATTA GATGGGGCG TATTTTTTATAGAGG TERM 4449 4060965 - 4060986 + F 100 -12.3 -4.25873 | opp_overlap 4060965 4060964 4060962, overlap 4060962 GATTTTAATGAATAG CGCCCTATC ATTA GATGGGGCG TATTTTTTATAGAGG YE3719 4061010 - 4062008 + | hypothetical protein YE3720 4063052 - 4062156 - | LysR family transcriptional regulator TERM 4450 4063118 - 4063106 - H 70 -7.7 -3.63569 | TTAACTGGCTAACAA TCTGG CGT CCAGA CGCTTACCATTTGTT YE3721 4063168 - 4063872 + | hypothetical protein TERM 4451 4063869 - 4063892 + T 83 -8.8 -4.18018 | opp_overlap 4063870, overlap 4063870 GATTGATTTACCAGA ATGACCGGGT ATTC GCCCGGTCAG TTTTAAATGCCGCAG TERM 4452 4063870 - 4063891 + T 93 -12.3 -3.10597 | opp_overlap 4063870, overlap 4063869 ATTGATTTACCAGAA TGACCGGGT ATTC GCCCGGTCA GTTTTAAATGCCGCA TERM 4453 4063891 - 4063870 - T 89 -11.6 -3.42699 | opp_overlap 4063870 4063869 ATTGATTTACCAGAA TGACCGGG TATTCG CCCGGTCA GTTTTAAATGCCGCA YE3722 4064993 - 4063938 - | NADP-dependent alcohol dehydrogenase YE3723 4066120 - 4065125 - | putative aldo/keto reductase TERM 4454 4065279 - 4065301 + g 86 -7.6 -5.00616 | TCGAGCTTGCGTGTC CCTGGGATCG GCA CGATCCACGG TTTTTTCGCCAGCAA TERM 4455 4065339 - 4065349 + g 80 -6.8 -4.8048 | overlap 4065334 AAGGCGATTTGCGCC GGTG TGG CACC TTTTTGCTGTGCCAC YE3724 4066304 - 4067197 + | LysR family transcriptional regulator TERM 4456 4067232 - 4067205 - T 100 -14.2 -3.84719 | opp_overlap 4067210 4067211, overlap 4067211 AGCGCTAAATCCAAA CAAAAACCCCGC CGAA GCGGGGGTTTTG CGGAATGAGTGGAGT TERM 4457 4067210 - 4067227 + T 79 -8.3 -4.09864 | opp_overlap 4067205 4067211, overlap 4067211 TAAATCCAAACAAAA ACCCCGC CGAA GCGGGGG TTTTGCGGAATGAGT TERM 4458 4067211 - 4067226 + T 86 -11.8 -3.05597 | opp_overlap 4067205 4067211, overlap 4067210 AAATCCAAACAAAAA CCCCGC CGAA GCGGGG GTTTTGCGGAATGAG TERM 4459 4067226 - 4067211 - T 100 -11.8 -5.34381 | opp_overlap 4067211 4067210, overlap 4067205 AAATCCAAACAAAAA CCCCGC CGAA GCGGGG GTTTTGCGGAATGAG TERM 4460 4067348 - 4067321 - T 100 -12 -4.12475 | opp_overlap 4067327, overlap 4067327 CATATATCACATAAA CAAAAACCCCGC CGAA GCGGGGTTTGCG GAATGAGTGGAGTTG TERM 4461 4067327 - 4067342 + T 91 -11.8 -3.55761 | opp_overlap 4067321 4067327 TCACATAAACAAAAA CCCCGC CGAA GCGGGG TTTGCGGAATGAGTG TERM 4462 4067342 - 4067327 - T 100 -11.8 -5.42975 | opp_overlap 4067327, overlap 4067321 TCACATAAACAAAAA CCCCGC CGAA GCGGGG TTTGCGGAATGAGTG YE3726 4068650 - 4067751 - | putative tetrapyrrole methylase TERM 4463 4068715 - 4068697 - H 80 -2.5 -5.42259 | gap 1, opp_overlap 4068697, overlap 4068700 GCATCTTGAAAAAAA CATCACTG GATA CAGT-ATG CTTTCCTCAACATTC YE3727 4068713 - 4070686 + | hypothetical protein YE3728 4070730 - 4071083 + | hypothetical protein TERM 4464 4071092 - 4071110 + F 100 -10.3 -4.28656 | GGATTGATGATTCCT CTCCGGT TTTAT ACCGGAG TTTTAAATATTAAGT YE3729 4071139 - 4071729 + | DnaA initiator-associating protein DiaA YE3730 4071740 - 4072315 + | hypothetical protein TERM 4465 4072345 - 4072368 + T 100 -12.4 -4.70659 | opp_overlap 4072334 4072338 AGAGCAACCCTATTA TGGGCCGGGA GAAA TCCAGGCCCA TTTTTAGCTATCCCA mtgA 4073121 - 4072396 - | monofunctional biosynthetic peptidoglycan transglycosylase elb2 4073771 - 4073118 - | isoprenoid biosynthesis protein TERM 4466 4074133 - 4074156 + r 93 -4.4 -5.81032 | overlap 4074136 TGGCGCAGTATTCGC GCACCCCGGC CTCG GTCGGGGTTA TTTTTTTTCAGCTTC TERM 4467 4074136 - 4074153 + r 100 -10.5 -4.96028 | overlap 4074133 CGCAGTATTCGCGCA CCCCGGC CTCG GTCGGGG TTATTTTTTTTCAGC arcB 4076490 - 4074154 - | aerobic respiration control sensor protein ArcB TERM 4468 4076687 - 4076668 - R 72 -10 -2.74605 | overlap 4076665 GGGGGTCAAAACTTA CGGCGTAG CGAG CTACGCCA GACTGAGTGCGTACA YE3734 4077688 - 4076786 - | hypothetical protein TERM 4469 4077155 - 4077183 + g 87 -11 -4.24342 | gap 1, opp_overlap 4077151 ATGACAGCACACTTT CAGCCC-TCGGGC ACGG GCGCGACGGGCTG TTTGTTGGTAGCAGG TERM 4470 4077905 - 4077891 - H 71 -5 -4.68424 | overlap 4077893 CAATTCAGTGAAAAA TAGTGT TAA ACACCA GAAAATACATACAAT TERM 4471 4078586 - 4078569 - g 74 -4.1 -4.91109 | CTGCTATTACAAAAA CCGGA TCGTTTTT TCCGG ATGGTCGCAGAAGAA TERM 4472 4081971 - 4081929 - g 77 -4.8 -4.96996 | opp_overlap 4081969 GCCAAACAAAACAAA CTGGATCTGTCGCCAATGCT GAA AACAGCAACGCCACATCCAG GCAAAGCGCTGTATT gltB 4078236 - 4082846 + | glutamate synthase subunit alpha gltD 4082856 - 4084274 + | glutamate synthase subunit beta TERM 4473 4084330 - 4084311 - f 71 -9.2 -3.02902 | opp_overlap 4084308 4084312, overlap 4084308 4084306 CATCTAAAAACATCA GGGGCTGG TTAT CCAGCCCT TTTTATTGTGTTTTT TERM 4474 4084312 - 4084329 + F 100 -12.7 -5.35365 | opp_overlap 4084311 4084308 4084306, overlap 4084308 ATCTAAAAACATCAG GGGCTGG TTAT CCAGCCC TTTTTATTGTGTTTT TERM 4475 4084642 - 4084658 + G 71 -10.1 -2.78463 | GGCTATAATATTGAG GCTCGAG GTG CTCGGGC TGTGGTGGCGGAACT YE3737 4084540 - 4085025 + | hypothetical protein TERM 4476 4085041 - 4085064 + T 100 -18.2 -4.06419 | opp_overlap 4085041, overlap 4085063 TGGTAACAGTACGAA TCAGGGCGGC CAAA GCCGCCCTGA TTGTTTGTCCAAAAA TERM 4477 4085064 - 4085041 - T 100 -18.2 -3.27923 | opp_overlap 4085041 4085063 TGGTAACAGTACGAA TCAGGGCGGC CAAA GCCGCCCTGA TTGTTTGTCCAAAAA TERM 4478 4085150 - 4085121 - T 70 -9.3 -2.76263 | opp_overlap 4085147, overlap 4085118 4085128 GCGACTACTTAACCA CACGCAATGCTGG ACGA CCACCACTACGTG GCGGTTGCGGCGGTT sspB 4085625 - 4085110 - | ClpXP protease specificity-enhancing factor sspA 4086272 - 4085631 - | stringent starvation protein A TERM 4479 4086630 - 4086614 - R 100 -13.7 -5.85737 | opp_overlap 4086614 ATATCAATAAAAAAA CCCGGTG AGA CACCGGG TTTTTACCATTAATC TERM 4480 4086614 - 4086630 + r 100 -13.7 -4.67904 | opp_overlap 4086614 ATATCAATAAAAAAA CCCGGTG AGA CACCGGG TTTTTACCATTAATC rpsI 4087059 - 4086667 - | 30S ribosomal protein S9 rplM 4087502 - 4087074 - | 50S ribosomal protein L13 TERM 4481 4087302 - 4087319 + g 78 -5.5 -4.91712 | CTTGTCTGTACGCTT GTTACCG GTCA CGGCAAC TTTTTCTGCGTTCAG YE3742 4088962 - 4087835 - | hypothetical protein TERM 4482 4089384 - 4089402 + G 73 -8.8 -3.88787 | opp_overlap 4089383 TTGCTTGATAACATG GCTCGCGA CTA TCGCCAGC TTTATCAGCATATGG YE3743 4089186 - 4089590 + | cytochrome d ubiquinol oxidase subunit III TERM 4483 4090355 - 4090333 - g 77 -8.5 -4.26076 | overlap 4090350 TGACCGCCATTAAAA TCGCAGATT CTGAC AACCTGCGA GTCGGTGACTTTGCA degQ 4089861 - 4091234 + | protease TERM 4484 4091273 - 4091247 - f 100 -15.2 -4.8543 | overlap 4091248 TAATTTGCAGAAAAA TCGGACACAGCA CAA TGCTGTGTCCGT CAAACTCATGCTATT TERM 4485 4091272 - 4091248 - f 100 -18.7 -3.50535 | overlap 4091247 AATTTGCAGAAAAAT CGGACACAGCA CAA TGCTGTGTCCG TCAAACTCATGCTAT TERM 4486 4092299 - 4092316 + G 73 -3.4 -4.89477 | TGGCAGAGATTCGCC CTGGAA CCACCA TTCCGG TTTTATTATTACGCA degS 4091323 - 4092411 + | serine endoprotease TERM 4487 4092438 - 4092463 + T 100 -12.7 -5.24129 | gap 1, opp_overlap 4092438 TATGGCTAAAAAAAA TGCCAGCTCGAT ATC ATCG-GCTGGCA TTTTTTATGACGCGG TERM 4488 4092463 - 4092438 - T 100 -12.7 -5.76949 | gap 1, opp_overlap 4092438 TATGGCTAAAAAAAA TGCCAGCTCGAT ATC ATCG-GCTGGCA TTTTTTATGACGCGG murA 4093758 - 4092490 - | UDP-N-acetylglucosamine 1-carboxyvinyltransferase YE3747 4094143 - 4093880 - | BolA-like protein TERM 4489 4094242 - 4094214 - R 82 -6 -5.04868 | gap 1 TGAAACTAAAGAAAA GCCCCTGTTTTGC TATT GCACA-CAGAGGC TTGAAAACTTTAGTT YE3748 4094632 - 4094309 - | putative anti-sigma B factor antagonist TERM 4490 4094538 - 4094562 + g 86 -12.2 -3.5764 | opp_overlap 4094558 GCCAACAGTGCTTCA CGCTGTTGCC ACAGA GGTAACAGCG TTTCGCGATCCAATT yrbC 4095261 - 4094635 - | hypothetical protein TERM 4491 4094789 - 4094803 + g 77 -6.4 -4.57569 | overlap 4094782 4094791 TCATACGCCTGCCAG TAGCCA GTT TGGCTG TTTTTACGCCACTGG TERM 4492 4095144 - 4095168 + g 76 -10.7 -3.18264 | CTTGTTCAGTTTTCA GGCGCGTAAAG GTT CTTTGCGCGGC TTCATCCATCAGACG yrbD 4095834 - 4095274 - | hypothetical protein yrbE 4096621 - 4095839 - | hypothetical protein yrbF 4097418 - 4096636 - | putative ABC transporter ATP-binding protein YrbF yrbG 4097845 - 4098819 + | putative calcium/sodium:proton antiporter YE3754 4098877 - 4099854 + | D-arabinose 5-phosphate isomerase YE3755 4099868 - 4100431 + | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase TERM 4493 4100490 - 4100504 + G 71 -6.4 -4.25104 | overlap 4100475 TTTAGCCCTGATTGG CTGGAA TAT TTCCGG TTTTAATCAACAAGA yrbK 4100428 - 4100991 + | hypothetical protein YE3757 4100975 - 4101520 + | hypothetical protein TERM 4494 4101761 - 4101749 - g 73 -10.5 -3.16564 | TTGCCATTGCATGAA CGCGC CCT GCGCG GGATTGGCTATTTGC yhbG 4101527 - 4102252 + | putative ABC transporter ATP-binding protein YhbG TERM 4495 4102368 - 4102396 + G 85 -11 -3.89346 | GGCAATGACTCCGCA GCTACAGCAGGC TATTC GCCTGTTGCAGC TTTCTACGCTAGAAC TERM 4496 4103623 - 4103593 - g 75 -3.3 -5.02074 | gap 1, overlap 4103594 4103620 GCACTGGTGAAAAAA TTGGTTGCGGCAGA AAAT CCTGCCA-AACCAC TTAGTGACAGTAAAC glnF 4102315 - 4103748 + | RNA polymerase factor sigma-54 yhbH 4103772 - 4104059 + | putative sigma(54) modulation protein TERM 4497 4104200 - 4104162 - f 100 -16.9 -3.05935 | ACACTCGCTACCTAA CCTGATGCCAGCAGA GAAGAATAT TCCGCTGGCATCAGG CGTAAAACAGCGCTT ptsN 4104230 - 4104712 + | sugar-specific enzyme IIA component of PTS YE3762 4104791 - 4105642 + | hypothetical protein npr 4105643 - 4105915 + | phosphohistidinoprotein-hexose phosphotransferase component of N-regulated PTS system (Npr) TERM 4498 4106097 - 4106082 - f 93 -11.8 -3.61764 | opp_overlap 4106082 GCACCAACCGCCAAA GGGGGC CGCG GCCCCC TTGTGGAATCCCGCG TERM 4499 4106082 - 4106097 + F 89 -11.8 -3.32844 | opp_overlap 4106082 GCACCAACCGCCAAA GGGGGC CGCG GCCCCC TTGTGGAATCCCGCG TERM 4500 4106226 - 4106209 - f 73 -8.4 -3.58343 | opp_overlap 4106209 CTCATGACGCCTAAA TCCGCC GTCCAT GGCGGA TTTCCCTGGCTACAT TERM 4501 4106209 - 4106226 + F 75 -9.1 -3.66999 | opp_overlap 4106209 CTCATGACGCCTAAA TCCGCCG TCCA TGGCGGA TTTCCCTGGCTACAT TERM 4502 4106281 - 4106298 + F 85 -7.1 -4.89567 | CTTTTAATTTCAAGG TCAAAAC AATG GTTTTGA TTTTCTCTTTTGACC TERM 4503 4106482 - 4106507 + F 100 -16.2 -2.52464 | GCGCAAGCCGCAGGT GCAGGAGGGC CGGCCT GCCCTCCTGC TCGGTTGAGGCCACA TERM 4504 4106898 - 4106880 - f 82 -10.2 -3.58536 | opp_overlap 4106881, overlap 4106881 AAACCGATCCTGAAA GGCCCCTC ATT GAGGGGCT TTTTTTTGTCTGCCG TERM 4505 4106897 - 4106881 - f 93 -13.7 -2.7464 | opp_overlap 4106881, overlap 4106880 AACCGATCCTGAAAG GCCCCTC ATT GAGGGGC TTTTTTTTGTCTGCC TERM 4506 4106881 - 4106897 + F 100 -13.7 -6.02914 | opp_overlap 4106881 4106880 AACCGATCCTGAAAG GCCCCTC ATT GAGGGGC TTTTTTTTGTCTGCC TERM 4507 4107444 - 4107424 - g 71 -10.4 -2.88945 | opp_overlap 4107423, overlap 4107423 GCCATCCACAAGAAG GGGCGGCA CGTCT TGCCACCC AGTTCTCAGGCAATG pyrB 4107093 - 4108028 + | aspartate carbamoyltransferase catalytic subunit pyrI 4108040 - 4108504 + | aspartate carbamoyltransferase regulatory subunit YE3768 4109020 - 4109406 + | hypothetical protein TERM 4508 4109427 - 4109446 + F 100 -11.4 -5.55769 | ATGTGATTGCGTCTA CGGCTGGT GTTT ACCGGCCG TTTTTTATTATCCCA YE3769 4109674 - 4111110 + | hypothetical protein TERM 4509 4111253 - 4111269 + G 83 -6.5 -4.86731 | ACTGGTACCCCTTAG CCTGAGT AAC ACCCAGG TTTTGTTTGCCGAGC YE3770 4111104 - 4112033 + | hypothetical protein YE3771 4112030 - 4112851 + | hypothetical protein YE3772 4112875 - 4113609 + | hypothetical protein olgH 4115657 - 4113996 - | trehalose-6-phosphate hydrolase TERM 4510 4115010 - 4114996 - G 73 -7.8 -4.04206 | CCATCGGTATAGAAA CGGCGA CCA TCACCG TCAAAATCATCGGGA TERM 4511 4115508 - 4115495 - G 72 -5.9 -4.32857 | GCGGCGAAACATAAA CCGGC GTCA GCCAG ATAGCATCAACACCG TERM 4512 4115715 - 4115686 - R 88 -9.3 -4.33182 | gap 1, opp_overlap 4115685 4115686, overlap 4115683 TCATTGAGAAAATAA CTCCACCAG-GGAA TAA CCCCACTGGCGGAG GTTTGCGATTCAGAC treB 4117140 - 4115725 - | trehalose(maltose)-specific PTS system components IIBC TERM 4513 4116104 - 4116069 - G 70 -7.6 -3.8917 | GGCTAATGATAATAA TGCCCAACACCGCAGA GGCT TGCGCGATATTGGACA AGGCAATCAGTGGCC treR 4118304 - 4117357 - | trehalose repressor TERM 4514 4118452 - 4118484 + H 75 -5.6 -4.62069 | opp_overlap 4118452 ACTGGTAACATATTA TTACCCTAACGG ATGAAATTC CCGTCAGGGTGA TTTTTGCCGTGGCAA TERM 4515 4119393 - 4119418 + G 70 -7.6 -3.79473 | gap 1 GATATTATTAAACTC TCTGCCGGTGA CATGA TC-CCGGCGGA TTTACGTATTCTGGT mgtA 4118811 - 4121531 + | magnesium-transporting ATPase MgtA YE3777 4123581 - 4121653 - | putative transcriptional regulator YE3778 4124876 - 4123653 - | hypothetical protein TERM 4516 4124947 - 4124911 - R 76 -9.5 -3.44206 | overlap 4124902 4124901 GAAGAGCTACCAGAA GGTAGGTGTCGCG CCAAACCAAAC CGCCACACCTACC TCCGCCGATACTGAG YE3779 4125726 - 4124986 - | hypothetical protein YE3780 4126842 - 4125730 - | L-seryl-tRNA selenocysteine synthase TERM 4517 4125849 - 4125862 + g 73 -2.3 -5.02074 | opp_overlap 4125849 AAGCACGGAAGTAAA TAGCG ATAT CGCCA TTTTTTAGCGCATCA YE3781 4127995 - 4126826 - | dihydroorotase YE3782 4128843 - 4128190 - | putative inner membrane protein YE3783 4129638 - 4128862 - | hypothetical protein YE3784 4129948 - 4129652 - | hypothetical protein YE3785 4130313 - 4129948 - | hypothetical protein YE3786 4130681 - 4130337 - | hypothetical protein TERM 4518 4131017 - 4131049 + H 100 -14.1 -4.85599 | opp_overlap 4131022 TATTAAGCTATTTTC TAACACCCCCTCTCC TAT GGCGTGGGGGTGTTG TTTTTATACCCTAAA TERM 4519 4131044 - 4131022 - H 76 -10.4 -3.03243 | opp_overlap 4131017 AGCTATTTTCTAACA CCCCCTCTCC TAT GGCGTGGGGG TGTTGTTTTTATACC rnk 4131213 - 4131623 + | nucleoside diphosphate kinase regulator YE3788 4132058 - 4131672 - | putative cytochrome TERM 4520 4132206 - 4132224 + r 70 -7.4 -3.84451 | opp_overlap 4132206 TTCAGACCAAAAAAA GCTGGC AACAAAG GCCAGC TTTAGATTTACAGCA TERM 4521 4132224 - 4132206 - R 100 -7.4 -5.58454 | opp_overlap 4132206 TTCAGACCAAAAAAA GCTGGC AACAAAG GCCAGC TTTAGATTTACAGCA pmbA 4133588 - 4132248 - | peptidase PmbA TERM 4522 4133547 - 4133561 + g 73 -10 -3.3344 | TGCAACAGCTTGTTC CAGCGT TTT ACGCTG TTCTGCAACTTGAGT TERM 4523 4133817 - 4133807 - g 73 -2.4 -5.1523 | CCCAGAAGATAAAAA CGAC GAT GACG ATGAAATTATCTGGG TERM 4524 4134151 - 4134167 + G 74 -9.5 -3.48395 | AAGGCGATGATGTCA TTCCAAC CGT GTTGGAA TTGTATCCAGAAGCT YE3790 4133757 - 4134302 + | hypothetical protein YE3791 4134720 - 4134454 - | putative ribonuclease inhibitor YE3792 4135183 - 4134725 - | putative ribonuclease TERM 4525 4134909 - 4134894 - G 73 -3.2 -4.84359 | opp_overlap 4134894 4134899 TCACGGTTAGAAAAA CGATCG CCGC CGATGG CTTTTCCCGGTAGCA gabD 4136789 - 4135296 - | succinate-semialdehyde dehydrogenase yhcP 4138866 - 4136911 - | p-hydroxybenzoic acid efflux subunit AaeB TERM 4526 4138822 - 4138798 - G 85 -10.7 -3.95621 | overlap 4138820 ATGAAAGCCCAGAAA CAGTGCCGCCA CAA TGGCGAAACTG AGCTTAAAAGCAAAG yhcQ 4139803 - 4138868 - | p-hydroxybenzoic acid efflux subunit AaeA TERM 4527 4139379 - 4139367 - G 71 -9.1 -3.54459 | opp_overlap 4139358 TCAAGTTTGGCTAAA TCGCG CAC CGCGA CAGCTTTCGCCAATT YE3796 4140014 - 4139811 - | hypothetical protein TERM 4528 4140698 - 4140724 + G 72 -10.9 -2.60075 | gap 1, overlap 4140697 CGGGCTTTCCGTCAA TCTGGTGACCGG CATA CCGG-CACCGGA CTTGATTGCCGACGG YE3797 4140327 - 4141238 + | putative DNA-binding transcriptional regulator tldD 4142755 - 4141310 - | protease TldD TERM 4529 4141489 - 4141503 + g 75 -5.7 -4.4874 | TCAAAGTGGCCCCTT TCACC GCGCG GGTGA TTTTGCCTTTTTCGA YE3799 4143627 - 4142767 - | putative carbon-nitrogen hydrolase YE3800 4147499 - 4143624 - | hypothetical protein TERM 4530 4143920 - 4143936 + g 71 -2.9 -4.87626 | CAACCACTAAGTCAT TGGTATG CAT CACGCCA TTTTTGATATTGGCG cafA 4149015 - 4147546 - | ribonuclease G yhdE 4149598 - 4149005 - | Maf-like protein mreD 4150100 - 4149612 - | rod shape-determining protein MreD mreC 4151083 - 4150097 - | cell wall structural complex MreBCD transmembrane component MreC envB 4152226 - 4151183 - | rod shape-determining protein MreB TERM 4531 4152421 - 4152409 - R 71 -9.1 -3.2964 | AAACCTTCGGCACAA CGCAG ATT CTGCG CAACGACCGGCGTAA yhdA 4154480 - 4152561 - | regulatory protein CsrD TERM 4532 4154218 - 4154232 + g 71 -5 -4.48987 | overlap 4154220 GCAGGGAGTTTTAGT TGGTAC AAC GTACTA TTTTCATTCTGAACG TERM 4533 4154353 - 4154368 + g 93 -4.7 -5.626 | overlap 4154349 GCTGTCACAATGCTC TGGAG GCGGTG CTCCA TTTTTTTCTGGCATA TERM 4534 4154566 - 4154539 - H 70 -3.6 -4.82901 | gap 1 TTCCTTCGAGAAAAA TACTATAT-GGCA GAA TGCCGACATAATA CTGGTTTTTTACTTC yhdH 4154765 - 4155742 + | zinc-binding dehydrogenase TERM 4535 4155752 - 4155778 + F 72 -7.2 -4.03167 | overlap 4155743 4155753 CGCTGATTCCCCCCC ACTGGGGAGAGT CTC ATGCTCCCCAGC TTATTATTCGTATTG TERM 4536 4155753 - 4155777 + F 79 -10.7 -3.00816 | overlap 4155743 4155752 GCTGATTCCCCCCCA CTGGGGAGAGT CTC ATGCTCCCCAG CTTATTATTCGTATT TERM 4537 4156292 - 4156277 - g 77 -4.6 -4.96848 | overlap 4156278 GTTGGCAGATAAAAA TCGACG GTGA CGTCGC TAAGCCCATGACACT YE3808 4155901 - 4156935 + | putative sulfite oxidase subunit YedY YE3809 4156935 - 4157534 + | putative sulfite oxidase subunit YedZ aroQ 4157743 - 4158195 + | 3-dehydroquinate dehydratase accB 4158353 - 4158817 + | acetyl-CoA carboxylase biotin carboxyl carrier protein subunit TERM 4538 4159780 - 4159762 - g 85 -10.2 -4.00756 | overlap 4159764 GATTTGATCAAAGAA CAGCTGCG TAT CGCAGCGG GCCAACCTCTCTCTA TERM 4539 4159778 - 4159764 - g 83 -11.4 -3.59252 | overlap 4159762 TTTGATCAAAGAACA GCTGCG TAT CGCAGC GGGCCAACCTCTCTC TERM 4540 4159880 - 4159895 + G 74 -9 -3.64703 | CCTTCCTGCCGAGTC CGGGTA AAAT TACCCG TTTCCATGCGCCGGG accC 4158829 - 4160178 + | acetyl-CoA carboxylase biotin carboxylase subunit TERM 4541 4160216 - 4160234 + F 100 -8.1 -5.54338 | opp_overlap 4160215 ACCTTTTTATATCAG GGCCGGT TAATC ATCGGCC TTTTTCTTTTCATTA yhdT 4160453 - 4160695 + | hypothetical protein panF 4160685 - 4162139 + | sodium/panthothenate symporter prmA 4162315 - 4163196 + | ribosomal protein L11 methyltransferase YE3816 4163625 - 4164590 + | tRNA-dihydrouridine synthase B fis 4164615 - 4164911 + | DNA-binding protein Fis TERM 4542 4164964 - 4164941 - T 100 -10.2 -4.56597 | opp_overlap 4164941 GTTGTTGTTTAAAAA GGCGTACTCC ACAC GGAGCGCGCC TTTTTTATTAGGTCA TERM 4543 4164941 - 4164964 + T 100 -10.2 -5.4833 | opp_overlap 4164941 GTTGTTGTTTAAAAA GGCGTACTCC ACAC GGAGCGCGCC TTTTTTATTAGGTCA YE3818 4166542 - 4164983 - | cell signalling regulator TERM 4544 4165820 - 4165834 + g 82 -5.6 -5.0133 | opp_overlap 4165820 GCTAGTCACCATCAA GCTGCC ATT GTCAGC TTTTTTGACAGCCTC TERM 4545 4166643 - 4166616 - H 72 -7.6 -3.75465 | opp_overlap 4166616 4166633, overlap 4166613 4166612 TAACATGAAAAGTAA GCGGGAACTCAC CTAT GTGAGCATCCGC TCATTATTTATCTCC TERM 4546 4166633 - 4166646 + H 71 -6.7 -4.16814 | opp_overlap 4166616 4166613 4166612, overlap 4166616 GGGAACTCACCTATG TGAGC ATCC GCTCA TTATTTATCTCCTCA pcpY3 4166784 - 4167254 + | outer membrane lipoprotein TERM 4547 4167283 - 4167262 - f 100 -15.9 -3.84451 | opp_overlap 4167262 CTCGTTAAATTCAAA TACCGGGGG ATTT CCCCCGGTA TTTAGCGGCCTAATG TERM 4548 4167262 - 4167283 + F 100 -15.9 -3.54741 | opp_overlap 4167262 CTCGTTAAATTCAAA TACCGGGGG ATTT CCCCCGGTA TTTAGCGGCCTAATG cspA1 4167654 - 4167866 + | major cold shock protein CspA1 cspA3 4168133 - 4168345 + | major cold shock protein CspA1 cspA2 4168613 - 4168825 + | major cold shock protein TERM 4549 4168987 - 4168948 - f 95 -4.8 -5.7946 | gap 1, overlap 4168949 TTCTGAATAAAAAAA GCCCGCCTCTGTGCTGAGG AAT CCCCAGTAATG-GGCGGGT AAAAAAGACAGGCAT TERM 4550 4168986 - 4168949 - f 77 -8.3 -4.06592 | gap 1, overlap 4168948 TCTGAATAAAAAAAG CCCGCCTCTGTGCTGAGG AAT CCCCAGTAATG-GGCGGG TAAAAAAGACAGGCA TERM 4551 4169963 - 4169945 - g 74 -3 -5.14563 | overlap 4169946 TTCGGGATGAAAAAA GCGAACGC TTC GGGTTCGG CCTGCGTGCTAGCTA TERM 4552 4170136 - 4170169 + G 87 -11.1 -4.25104 | opp_overlap 4170139 ATATCTTATTTGACA TTAGCGGAGAATATC TTGC GACACTCTCCGCTAA TTTTAATGCGAACGG TERM 4553 4170166 - 4170139 - g 81 -12.8 -2.63596 | opp_overlap 4170136 TCTTATTTGACATTA GCGGAGAATATC TTGC GACACTCTCCGC TAATTTTAATGCGAA tpn1330 4169053 - 4170246 + | transposase for IS1330 TERM 4554 4170307 - 4170331 + F 100 -10 -5.26119 | opp_overlap 4170293 AGATGGTCACCCCCA CCCTGTGAGC GGTAA GCTGACAGGG TTTTCTTTTTGGAGG TERM 4555 4170968 - 4170954 - f 71 -2.1 -5.15381 | overlap 4170955 AAGAGAGTTAAAAAA CCATC TGGCC GATGA TGAAACAGCACAACG TERM 4556 4171386 - 4171359 - f 100 -11.4 -4.93877 | CTTCAGTAAATAAAA GAGCCAACAGTA AATC TACTGTCAGCTC AATGAGTTACCAAGT TERM 4557 4171957 - 4171940 - f 77 -3.5 -5.1523 | CGTACAATATAAAAA TGACTTT GATC AAAATCA TGCCGTTATTTTCTC YE3827 4172077 - 4173489 + | putative membrane transport protein TERM 4558 4173512 - 4173541 + F 75 -8.5 -3.87869 | opp_overlap 4173514, overlap 4173514 GTGTACTTAAAGTTA AACACCGCGCTAA CATA TCGGCGCGGTGTA TTTATCAGCGGTTGA TERM 4559 4173514 - 4173539 + F 83 -11.1 -3.52678 | opp_overlap 4173514, overlap 4173512 GTACTTAAAGTTAAA CACCGCGCTAA CATA TCGGCGCGGTG TATTTATCAGCGGTT TERM 4560 4173539 - 4173514 - f 88 -11.1 -3.85909 | opp_overlap 4173514 4173512 GTACTTAAAGTTAAA CACCGCGCTAA CATA TCGGCGCGGTG TATTTATCAGCGGTT YE3828 4173537 - 4173719 + | hypothetical protein ddg 4173848 - 4174768 + | lipid A biosynthesis palmitoleoyl acyltransferase TERM 4561 4174838 - 4174883 + T 100 -9.2 -4.59376 | gap 1, overlap 4174844 4174845 CACTTTTCCTGGCGG TTGACATGGCCTGATTTCGGT ACTGC ACCGGACTCAGGCCGT-TTAA TTTTACTTTGATCCT YE3830 4175633 - 4174815 - | putative transposase for IS1664 element TERM 4562 4174844 - 4174878 + g 100 -12.9 -4.29472 | overlap 4174838 4174845 TCCTGGCGGTTGACA TGGCCTGATTTCGGT ACTGC ACCGGACTCAGGCCG TTTAATTTTACTTTG TERM 4563 4174845 - 4174877 + g 90 -14.2 -3.16056 | overlap 4174844 4174838 CCTGGCGGTTGACAT GGCCTGATTTCGGT ACTGC ACCGGACTCAGGCC GTTTAATTTTACTTT TERM 4564 4175686 - 4175714 + r 77 -3.7 -5.08824 | ATTCGCGTTTTTTCC GCTGCTTCTCCTG AAT CAAGGCACGCAGC TTTTTTAAGTAGGCG YE3831 4176193 - 4175669 - | insertion element IS1664 protein YE3832 4177820 - 4176282 - | hypothetical protein TERM 4565 4176967 - 4176978 + g 81 -5.8 -4.87786 | opp_overlap 4176964, overlap 4176964 AATTTGGCAAAACTG GCTG TATC CAGC TTTTTATCAACTTCG TERM 4566 4177114 - 4177092 - G 73 -5.5 -4.54404 | gap 1, overlap 4177093 4177094 TAAATCAATAACAAA CGGCGCGATG GCCA CAACGCG-CG AGTCGACAATCGCCG YE3833 4178242 - 4179267 + | ABC transporter periplasmic solute-binding protein TERM 4567 4179377 - 4179352 - f 74 -4.1 -5.0538 | gap 1, opp_overlap 4179356 4179359, overlap 4179356 CTTGACCTTAAAAAA TAAG-TAAGCCC ATC GGGATTATCTTA CTTGCCGCCTTCCTG TERM 4568 4179452 - 4179418 - f 72 -9.9 -2.89881 | TATTTAGTGTATAGA CTCCCCTCCGGCAGG CTAGC CCTGCCGGATGAATG ACCCAGACCGAGGCC TERM 4569 4179616 - 4179634 + G 73 -5.2 -4.58773 | TCACCAACCTGTCAA CCCGAGGT ATC ACTTCAGG TTTTGCTTTCCTAAA TERM 4570 4180114 - 4180137 + G 73 -10.2 -3.14051 | overlap 4180112 CCGGGCAATTCCGCC GCACCTGGCC TATA GGCTTGGTGC TATTAATCGCCCTGC YE3834 4179474 - 4180652 + | putative ABC transporter permease YE3835 4180662 - 4181771 + | ABC transporter permease TERM 4571 4182393 - 4182405 + G 75 -7.7 -4.30844 | CCATGCTGTGCGTCA CCCAT GAG ATGGG TTTTGCTCGTACCGT YE3836 4181768 - 4182541 + | ABC transporter ATP-binding protein TERM 4572 4182579 - 4182598 + T 100 -13.6 -5.25803 | TCATTGGGTACTTCT GGGTGAGG GCAT CCTCACCC TTTTTTATCGCGATT YE3837 4183301 - 4182612 - | putative inner membrane protein TERM 4573 4184347 - 4184366 + G 71 -6.4 -4.30014 | gap 1, overlap 4184349 GTCATCCCTTGTGTG TGGTGGTGC CGC GCACC-CCG TTTTGGCTTAATCGC TERM 4574 4184769 - 4184748 - g 100 -10.1 -4.86731 | TTGGTGGAAATAAAA CCGGCCACT GATC AGCAGCCGG ATTGAGGGATATTAA YE3838 4183848 - 4184774 + | LysR family transcriptional regulator YE3839 4186430 - 4184781 - | putative putative Na(+)/H(+) exchanger protein TERM 4575 4186506 - 4186520 + r 76 -2.9 -5.26316 | GCTGGAGCGCAGCTT TTGAT AGTAG ATCAA TTTTTTGTGCAATGG YE3840 4187911 - 4186646 - | putative xanthine/uracil permease TERM 4576 4187902 - 4187891 - G 75 -5.8 -4.60487 | GACCATCGCCAAAAA GGTC GTCA GACC GGCCAGCACTTCCTG TERM 4577 4188208 - 4188188 - R 75 -3.3 -5.17507 | overlap 4188191 AAAATCGAAGAAAAA CTACAATAA GCG TCATTGTTG CAGGCAGTTTGGACG TERM 4578 4188323 - 4188305 - R 82 -6 -4.91429 | overlap 4188307 AAATGGCAAATAAAA TAGCCTTA TTG TAAGGCAA ACGATTATCTAGCTA TERM 4579 4188321 - 4188307 - R 77 -8.6 -4.06281 | overlap 4188305 ATGGCAAATAAAATA GCCTTA TTG TAAGGC AAACGATTATCTAGC TERM 4580 4188438 - 4188462 + r 80 -5 -5.24796 | gap 1, opp_overlap 4188438 4188442, overlap 4188441 CCTGCAGGCAGGAAA CGAAGTGTGAG CGGC CTCACACC-CG TTTTTCTTATATAAA TERM 4581 4188462 - 4188438 - R 70 -7.2 -3.76224 | gap 1, opp_overlap 4188438 4188441, overlap 4188442 CCTGCAGGCAGGAAA CGAAGTGTGAG CGGC CTCACAC-CCG TTTTTCTTATATAAA TERM 4582 4188459 - 4188442 - R 80 -9.9 -3.57418 | opp_overlap 4188441 4188438, overlap 4188438 CAGGCAGGAAACGAA GTGTGAG CGGC CTCACAC CCGTTTTTCTTATAT YE3841 4189160 - 4188489 - | putative glutathione S transferase TERM 4583 4189258 - 4189310 + H 100 -12.3 -3.94402 | opp_overlap 4189264, overlap 4189262 ATTCTGATATCGGCA TAAAAACAGCCTTTAGGTTGTAACT TAC AATAACAACCTAAAAGCTGTATTTA TTATTTACAACTTAT TERM 4584 4189262 - 4189306 + H 93 -8.7 -4.56978 | opp_overlap 4189264, overlap 4189258 TGATATCGGCATAAA AACAGCCTTTAGGTTGTAACT TAC AATAACAACCTAAAAGCTGTA TTTATTATTTACAAC TERM 4585 4189304 - 4189264 - H 100 -15.7 -4.84761 | opp_overlap 4189262 4189258 ATATCGGCATAAAAA CAGCCTTTAGGTTGTAACT TAC AATAACAACCTAAAAGCTG TATTTATTATTTACA TERM 4586 4189511 - 4189492 - g 82 -5.6 -5.04249 | overlap 4189493 TTTCGAAAAAATAAA GGGCTGAC TCAG GCCAGCCT GGCACAACTGTTAGG TERM 4587 4189510 - 4189493 - g 71 -9.1 -3.61465 | overlap 4189492 TTCGAAAAAATAAAG GGCTGAC TCAG GCCAGCC TGGCACAACTGTTAG YE3842 4189423 - 4189725 + | putative transcriptional regulator YE3843 4189727 - 4191055 + | putative transcriptional regulator TERM 4588 4191090 - 4191073 - T 87 -4.8 -5.50925 | opp_overlap 4191073 AACCAATATAAAAAA CCCAGC TATTAC ACTGGG TTTGATTTCTCTGTT exrB 4191671 - 4191120 - | single-strand DNA-binding protein TERM 4589 4193175 - 4193159 - g 71 -10.1 -2.85874 | overlap 4193156 CAAATACATTAATGA CCGCGGT GAT ACCACGG TACGCCGCCATCCAT uvrA 4192071 - 4194902 + | excinuclease ABC subunit A YE3846 4195314 - 4194961 - | hypothetical protein TERM 4590 4195604 - 4195587 - R 100 -9.9 -5.88476 | AAAATAAACAAAAAA GGCGATA TTGC TATCGCC TCAGACTGCTGACAA TERM 4591 4195737 - 4195754 + r 78 -9.9 -3.55122 | opp_overlap 4195732, overlap 4195733 TTGTCATTAAGCTCA GGCGATA TCCC TATCGCC TTAATTTAAATCATG tyrB 4196974 - 4195781 - | aromatic amino acid aminotransferase alr 4198111 - 4197032 - | alanine racemase b4052 4199547 - 4198141 - | replicative DNA helicase TERM 4592 4200234 - 4200224 - g 71 -6.8 -4.14392 | opp_overlap 4200224, overlap 4200227 TGCCAATGGGCAAAA GCAC TGG GTGC CAGGCTAATTGGCAC b4051 4199738 - 4200721 + | quinone oxidoreductase, NADPH-dependent TERM 4593 4200753 - 4200782 + F 90 -11.7 -3.6284 | opp_overlap 4200756, overlap 4200756 4200777 4200780 AAAAACTTTCGCCTA TAATGGATAGTTA AATA TGACTATCCATTA TTTACAATAATAGTT TERM 4594 4200756 - 4200779 + F 80 -9 -3.94634 | opp_overlap 4200756, overlap 4200753 4200777 AACTTTCGCCTATAA TGGATAGTTA AATA TGACTATCCA TTATTTACAATAATA YE3851 4200934 - 4201260 + | hypothetical protein TERM 4595 4201383 - 4201342 - T 100 -12.5 -4.50976 | gap 1, opp_overlap 4201340 4201342, overlap 4201346 4201349 CCTTACACTATAAAA GTAATAACCAGGGCCTCTAA CAA CTAGAAGCCCTGGCTAC-AC TGCTTTCTTTAATGC TERM 4596 4201380 - 4201346 - T 100 -16.6 -3.77905 | opp_overlap 4201342 4201340, overlap 4201342 4201349 ACACTATAAAAGTAA TAACCAGGGCCTCTAA CAA CTAGAAGCCCTGGCTA CACTGCTTTCTTTAA TERM 4597 4201377 - 4201349 - T 100 -16.1 -3.9978 | opp_overlap 4201342 4201340, overlap 4201346 4201342 CTATAAAAGTAATAA CCAGGGCCTCTAA CAA CTAGAAGCCCTGG CTACACTGCTTTCTT TERM 4598 4201995 - 4201967 - T 82 -6 -4.96848 | opp_overlap 4201966, overlap 4201970 TGTTTTAGATAAAAA TAAGCCTGCC AAAGAAACA GGCAGGCATA GTCAATTTCACTAAC TERM 4599 4201992 - 4201970 - T 86 -7.7 -4.58943 | opp_overlap 4201966, overlap 4201967 TTTAGATAAAAATAA GCCTGCC AAAGAAACA GGCAGGC ATAGTCAATTTCACT YE3852 4203054 - 4202026 - | tRNA-dihydrouridine synthase A TERM 4600 4202602 - 4202612 + g 76 -8.2 -4.11216 | opp_overlap 4202601 ATCCAGCTCATCAAT CCCG ATG CGGG TTTTCACCGTAACCG TERM 4601 4203385 - 4203351 - g 93 -11.4 -4.36411 | TATCAATCAGGAAAA GCTGCTTGCTCAGGCT GAA AGCCTGTGCCAACAAC GAAACGTCCGGCTGA TERM 4602 4203810 - 4203788 - g 74 -9.2 -3.63895 | TTGAAGCATGCGAAA GCCATGATCA TTG TGATCACGAC CATTCTATTGTGACA YE3853 4203328 - 4203837 + | zinc uptake transcriptional repressor YE3854 4204332 - 4204123 - | putative stress-response protein TERM 4603 4204634 - 4204596 - R 86 -9.1 -4.39989 | opp_overlap 4204607 ATGAAAGGAGTAAAA TTCTTTATATACCCTTC TTAAT GAAGGGTATATAGATAA ACGCGAAAATCAGAT b4043 4205252 - 4204644 - | LexA repressor TERM 4604 4205349 - 4205334 - R 75 -3.2 -5.12971 | opp_overlap 4205334, overlap 4205323 4205344 AAGAGTGAATAAAAA CAGGGA TTAA TCACTG TTTACATCCACAGCG b4042 4205748 - 4205380 - | diacylglycerol kinase TERM 4605 4205832 - 4205822 - H 71 -6.8 -4.18401 | opp_overlap 4205822 CCACAGATCTCAAAA CCAG TTT CTGG TATCCTTGCGACGAA TERM 4606 4206597 - 4206586 - g 71 -4.4 -4.71426 | CTCGCACCAAGAAAA TCTC CCAT GAGA AAGCACAGCAAAACG b4041 4205874 - 4208342 + | glycerol-3-phosphate acyltransferase TERM 4607 4208372 - 4208394 + T 100 -9.9 -5.64274 | opp_overlap 4208372 AAGCAAAAGCAAAAA TGGCCGGAT TCATC ATCTGGCCA TTTTTTTATAGATAA TERM 4608 4208394 - 4208372 - T 95 -7.7 -5.13016 | opp_overlap 4208372 AAGCAAAAGCAAAAA TGGCCGGAT TCATC ATCTGGCCA TTTTTTTATAGATAA ubiA 4209266 - 4208400 - | 4-hydroxybenzoate octaprenyltransferase TERM 4609 4208493 - 4208463 - G 71 -3.8 -4.68994 | ATTATTATTCAAAAA CGCGCGGAAGCATG GGT CACGTTCACGCCCG GCAATCATCTTCTGT ubiC 4209797 - 4209291 - | chorismate pyruvate lyase YE3860 4212857 - 4209936 - | hypothetical protein TERM 4610 4210777 - 4210788 + g 73 -7.2 -4.31085 | ACCGTTGGTTTTACA CCCG GTGG CGGG TTTTCAATTAATCTC TERM 4611 4211486 - 4211513 + g 77 -10.6 -3.61103 | opp_overlap 4211502 GTGTATGTAGGGGAT GCTCTGGCTTAA GAAG TTGAGCCAGCGC TTTAAGCTCCGCTTC TERM 4612 4212119 - 4212129 + g 77 -6.8 -4.65895 | CCTTTATCAGATAGC TGCC CTG GGCA TTTTTCGGTGCAAAA TERM 4613 4213077 - 4213060 - R 100 -12.7 -5.7827 | AATATAAAGAAAAAA GGTGCGC CGAA GCGCACC AATCATCCAGCCATA malM 4214045 - 4213110 - | maltose regulon periplasmic protein TERM 4614 4213799 - 4213789 - G 83 -8.2 -4.54727 | GCTGGTAAAGCAAAA GCGG CTA CCGC CCCTTCCACATTCCC TERM 4615 4214253 - 4214232 - R 100 -13.7 -3.49475 | opp_overlap 4214230, overlap 4214246 GGTATGTTTACAGAA CAGCCGCCC CAAA GGACGGCTG CATCACTTCTGTTAC lamB 4215551 - 4214265 - | maltoporin TERM 4616 4214324 - 4214340 + g 73 -7.9 -4.13767 | TCTTACCACGGCTAT CGGTACC AAT GGTCCCG TTTTGCGCTAACCCA malK 4216738 - 4215623 - | maltose/maltodextrin transporter ATP-binding protein YE3864 4216926 - 4216726 - | hypothetical protein TERM 4617 4216815 - 4216795 - G 82 -5.4 -5.10461 | CTGACTGAAGAAAAA TGGCGGAA GCAAA TTCCGGCA TGACCCATCGATTAC malE 4217386 - 4218597 + | maltose ABC transporter periplasmic protein TERM 4618 4218636 - 4218615 - f 100 -12.9 -4.11216 | GTTTCACCTGCAAAA GGGGCGCGG TTCG CCGTGCCCC GACACTACTCGCTGT TERM 4619 4218860 - 4218850 - g 76 -2.4 -5.26119 | overlap 4218851 GCCGTAAAAAGAAAA CCGC CTG GTGG CAAAGTGATGCGCTT malF 4218807 - 4220384 + | maltose transporter membrane protein malG 4220398 - 4221288 + | maltose transporter permease TERM 4620 4221470 - 4221490 + T 100 -10.3 -4.87665 | overlap 4221471 GGTACTGTGTCTTTA GGGCGGCCG TAA TGGCCGCCA TTTTTATGCATCAAA TERM 4621 4221471 - 4221489 + T 100 -13.8 -3.52117 | overlap 4221470 GTACTGTGTCTTTAG GGCGGCCG TAA TGGCCGCC ATTTTTATGCATCAA YE3869 4221920 - 4221513 - | phosphate-starvation-inducible protein PsiE TERM 4622 4221811 - 4221794 - G 73 -4.9 -4.72497 | gap 1, opp_overlap 4221795, overlap 4221795 TATTGACGAATAAAA CCTTTCCA AGA TGGAA-GG TTTCTTTTATCAGAA TERM 4623 4221795 - 4221811 + g 83 -7.3 -4.77173 | opp_overlap 4221794 4221795 ATTGACGAATAAAAC CTTTCCA AGA TGGAAGG TTTCTTTTATCAGAA TERM 4624 4221988 - 4221967 - R 100 -14.5 -5.40072 | overlap 4221985 CCGGGCCGAAAAAAA GCCCCTTAC ATCA GTAAGGGGC TAATAAGCACGGATC pgi 4223670 - 4222024 - | glucose-6-phosphate isomerase apk 4224330 - 4225640 + | aspartate kinase III TERM 4625 4225740 - 4225705 - T 100 -12.6 -4.67755 | opp_overlap 4225710, overlap 4225710 ATATTGATTGAAAAA CAAAACCGGCACTGCC TGTG GGGAGCGCCGGTTTTT TACTGTTTGCAGCAA TERM 4626 4225710 - 4225735 + T 100 -10.3 -5.32699 | opp_overlap 4225705 4225710 GATTGAAAAACAAAA CCGGCACTGCC TGTG GGGAGCGCCGG TTTTTTACTGTTTGC TERM 4627 4225735 - 4225710 - T 100 -12.5 -5.2853 | opp_overlap 4225710, overlap 4225705 GATTGAAAAACAAAA CCGGCACTGCC TGTG GGGAGCGCCGG TTTTTTACTGTTTGC YE3874 4226258 - 4225782 - | hypothetical protein metH 4229974 - 4226279 - | B12-dependent methionine synthase TERM 4628 4226506 - 4226517 + g 90 -5.8 -5.46276 | opp_overlap 4226505 CCACATCCAGCAACT GCCA GATT TGGC TTTTTTCTGTATGTT TERM 4629 4227254 - 4227268 + g 74 -2.7 -5.0133 | opp_overlap 4227253 CGCTTGCAAACTGAC CGGCG GGGTA CGCGG TTTTTTACGCGCATG TERM 4630 4227898 - 4227919 + g 79 -10.1 -3.70773 | opp_overlap 4227876 4227875 CGATAACCTCGATTG GCCGGTCAG CCTG CTGACGGGC TTCTTCAGTATCCAA TERM 4631 4228036 - 4228048 + g 74 -4.1 -4.83615 | CCACCTCATCACTCT TACTG CCA CGGTA TTTTTCTGCCAGATC TERM 4632 4228409 - 4228440 + g 74 -6.6 -4.36914 | gap 1, opp_overlap 4228408 4228407 4228405 GTCAAAAATAATATC TTCCGGCGGGAAGCC AAC GGTTTC-CGTCAGAA TTTTATAGGCGCGGC TERM 4633 4229464 - 4229433 - G 71 -7.3 -4.04295 | gap 1, overlap 4229414 4229429 TCAATCATAATTAAA TCGACACCGCCCTC AATCA GAGCACGG-GTCGA TTCACGGTAAGCCTC TERM 4634 4230476 - 4230487 + G 73 -7.2 -4.30719 | GGCCTTTGGACGATG GGCG CACA CGCC TTTATTGTCGGCAGC TERM 4635 4230742 - 4230752 + G 71 -6.8 -4.18018 | CCTGCCAGACGACCA GCTG GTT CAGC TTTTACATAAGAAAG YE3876 4230215 - 4231054 + | transcriptional repressor IclR YE3877 4231977 - 4231120 - | hypothetical protein YE3878 4232285 - 4231986 - | putative transposase for insertion sequence element IS1666 aceK 4234320 - 4232593 - | bifunctional isocitrate dehydrogenase kinase/phosphatase protein TERM 4636 4232776 - 4232762 - G 77 -2.8 -5.24129 | TCGGTGCATAAAAAA TGACGA AAC TCTTCA GGGAATACATCATTG TERM 4637 4234365 - 4234342 - R 79 -11 -3.12351 | opp_overlap 4234344, overlap 4234322 4234344 CTCCGTCATACGGAA CAGAGCCTGC ATAA GCAGGCTCTT GATAACACAACCTTT TERM 4638 4234363 - 4234344 - R 100 -13.6 -3.12327 | opp_overlap 4234344, overlap 4234322 4234342 CCGTCATACGGAACA GAGCCTGC ATAA GCAGGCTC TTGATAACACAACCT TERM 4639 4234344 - 4234363 + r 100 -13.6 -3.14211 | opp_overlap 4234322 4234344 4234342 CCGTCATACGGAACA GAGCCTGC ATAA GCAGGCTC TTGATAACACAACCT aceA 4235704 - 4234397 - | isocitrate lyase aceB 4237475 - 4235877 - | malate synthase TERM 4640 4237656 - 4237668 + r 80 -3.5 -5.34055 | overlap 4237660 AAACGATTTCCATTT TTATT TAA AATAA TTTTTTAATCTTTAT TERM 4641 4237859 - 4237828 - R 90 -7.3 -5.15634 | opp_overlap 4237834, overlap 4237834 TATTCGAGCAAAAAA TAGAAAGGCGGCT CGATTC AGCCGCCTTTATT AACATTCAGGGAGAG TERM 4642 4237853 - 4237834 - R 100 -10.7 -4.66347 | opp_overlap 4237834, overlap 4237828 AGCAAAAAATAGAAA GGCGGCT CGATTC AGCCGCC TTTATTAACATTCAG TERM 4643 4237834 - 4237853 + r 93 -10.7 -4.20918 | opp_overlap 4237834 4237828 AGCAAAAAATAGAAA GGCGGCT CGATTC AGCCGCC TTTATTAACATTCAG metA 4238810 - 4237881 - | homoserine O-succinyltransferase TERM 4644 4239156 - 4239122 - H 100 -13.7 -4.50976 | opp_overlap 4239127 4239129, overlap 4239129 TCGGATAGCAGAAAA GCAAAAACCCCACGC TTTTG GCATGGGGTCTTTAC TTGATTTGATACCTG TERM 4645 4239129 - 4239149 + H 75 -8.9 -3.60638 | opp_overlap 4239129 4239122, overlap 4239127 GCAGAAAAGCAAAAA CCCCACGCT TTT GGCATGGGG TCTTTACTTGATTTG TERM 4646 4239149 - 4239129 - H 100 -10.4 -5.1417 | opp_overlap 4239127 4239129, overlap 4239122 GCAGAAAAGCAAAAA CCCCACGC TTTTG GCATGGGG TCTTTACTTGATTTG TERM 4647 4239643 - 4239633 - H 82 -6.8 -4.78848 | opp_overlap 4239633 CTCTCAAATACAAAA CACC TTT GGTG TTGTAAGGTTAAGCC TERM 4648 4240755 - 4240766 + H 74 -4.4 -5.06816 | CCACTTTCGTGTTTG CACA GTGC TGTG TTTTTATTAAACAGT TERM 4649 4241262 - 4241280 + H 82 -10.3 -3.57798 | overlap 4241255 CTTGGTCTTCCGGCG TGCGGGT TTTTC ACCCGCA TTATCGTTACTTATG YE3883 4245402 - 4245944 + | putative transferase aroE 4246825 - 4246004 - | shikimate 5-dehydrogenase YE3885 4247406 - 4246834 - | putative ribosome maturation factor YE3886 4247950 - 4247414 - | putative DNA-binding protein YE3887 4248429 - 4247992 - | hypothetical protein YE3888 4249558 - 4248437 - | hypothetical protein TERM 4650 4249948 - 4249936 - g 75 -3.3 -5.01732 | overlap 4249937 AACTGTTGGAAAAAA GCGGT GAA ACCGG CATTGAAGAAGGTTG def 4249692 - 4250204 + | peptide deformylase TERM 4651 4250275 - 4250297 + G 90 -12.7 -3.65991 | overlap 4250278 GAACTCCTGACTTTG CAGCGCGCC ATTTA GGCGCGTTG TTGTCTTCCCAACAT TERM 4652 4250278 - 4250294 + G 85 -10.8 -3.9644 | overlap 4250275 CTCCTGACTTTGCAG CGCGCC ATTTA GGCGCG TTGTTGTCTTCCCAA TERM 4653 4250755 - 4250765 + G 71 -8.2 -3.73534 | AGTTGGCGCAGCTTG GCCC TCA GGGC TTATTGGTAACATTG fmt 4250229 - 4251176 + | methionyl-tRNA formyltransferase TERM 4654 4251442 - 4251457 + F 89 -6.8 -5.32944 | ACTTTCCCTTTATTT GCTGAC GTTT GTCGGC TTTTTTGGTTATGAA TERM 4655 4252589 - 4252566 - g 80 -3.8 -5.22039 | opp_overlap 4252564 4252566 CCTAAACTGAAAAAA GGTGGCGTAA TGGT TTATGCTACC TGTTCTATATTGCCT YE3891 4251468 - 4252757 + | 16S rRNA methyltransferase B trkA 4252809 - 4254185 + | potassium transporter peripheral membrane component mscL 4254305 - 4254715 + | large-conductance mechanosensitive channel TERM 4656 4254740 - 4254755 + T 100 -9 -5.59655 | opp_overlap 4254740 TATTTAACGCCAAAA GCCATC AAAT GATGGC TTTTTTATTAGTTTC TERM 4657 4254755 - 4254740 - T 83 -9 -4.19953 | opp_overlap 4254740 TATTTAACGCCAAAA GCCATC AAAT GATGGC TTTTTTATTAGTTTC TERM 4658 4254827 - 4254774 - T 100 -12.5 -3.58343 | overlap 4254778 4254781 TTTATTAGTTTCAAA TCGAGAAGGCCAGTGGTAATAAATC TATT GATTGCTTACCACTGGCCTCCCAGT TACCACCTTTTGCGT TERM 4659 4254823 - 4254778 - T 100 -18.5 -2.64803 | overlap 4254774 4254781 TTAGTTTCAAATCGA GAAGGCCAGTGGTAATAAATC TATT GATTGCTTACCACTGGCCTCC CAGTTACCACCTTTT TERM 4660 4254820 - 4254781 - T 100 -16.6 -3.47349 | overlap 4254778 4254774 GTTTCAAATCGAGAA GGCCAGTGGTAATAAATC TATT GATTGCTTACCACTGGCC TCCCAGTTACCACCT YE3894 4254975 - 4254769 - | hypothetical protein zntR 4255490 - 4255065 - | zinc-responsive transcriptional regulator YE3896 4255865 - 4255494 - | hypothetical protein TERM 4661 4256028 - 4255987 - R 91 -13.1 -2.71144 | opp_overlap 4255989 4255990 4256001, overlap 4256001 TATCTTGCTGAATTA TGGGCGTAAAAAAACCGGG CAAG CCCGGTTTTTTTACGCGTT TACAGATTACTCTGC TERM 4662 4255989 - 4256026 + r 100 -20.1 -3.62032 | opp_overlap 4255987 4256001, overlap 4255990 4256001 TCTTGCTGAATTATG GGCGTAAAAAAACCGGG CAAG CCCGGTTTTTTTACGCG TTTACAGATTACTCT TERM 4663 4255990 - 4256025 + r 100 -23.6 -2.76737 | opp_overlap 4255987 4256001, overlap 4255989 4256001 CTTGCTGAATTATGG GCGTAAAAAAACCGGG CAAG CCCGGTTTTTTTACGC GTTTACAGATTACTC TERM 4664 4256014 - 4256001 - R 100 -9.5 -5.40474 | opp_overlap 4255990 4255989 4256001, overlap 4255987 ATGGGCGTAAAAAAA CCGGG CAAG CCCGG TTTTTTTACGCGTTT TERM 4665 4256001 - 4256014 + r 100 -9.5 -5.4477 | opp_overlap 4256001 4255987, overlap 4255990 4255989 ATGGGCGTAAAAAAA CCGGG CAAG CCCGG TTTTTTTACGCGTTT rplQ 4256424 - 4256035 - | 50S ribosomal protein L17 TERM 4666 4256153 - 4256179 + g 75 -11.4 -2.73123 | opp_overlap 4256137 4256150 CGAGTGTAACCACCG GCGCGGCTCGCG AAA CGCGGGCCTAGC TCGTTAAACAGTTTT TERM 4667 4256375 - 4256347 - G 77 -10.4 -3.57246 | gap 1, overlap 4256345 4256365 ATGACGAACCAAAGA GCC-GGCCATGTT ACGG AACATAGCCTGGC GATGGCTGCTGTTAC rpoA 4257457 - 4256465 - | DNA-directed RNA polymerase subunit alpha TERM 4668 4256551 - 4256563 + g 75 -3.4 -5.01732 | CGAGCACGTCTTTAA TCTC AGTAA GAGA TTTTTTACCCAGGTT TERM 4669 4257498 - 4257480 - R 77 -10.4 -3.14132 | TCTCTTTGGTACTAA GCTTTACT TAG AGTAAAGC TCGACGATCAGGTGT rpsD 4258103 - 4257483 - | 30S ribosomal protein S4 TERM 4670 4258144 - 4258128 - R 82 -7.9 -4.42851 | opp_overlap 4258127 4258128 CCAACAAACCTAAAA GCAGCGT TAT ACGCGGC GCTTTTTCGGCGGAC rpsK 4258523 - 4258134 - | 30S ribosomal protein S11 rpsM 4258896 - 4258540 - | 30S ribosomal protein S13 TERM 4671 4259013 - 4258984 - R 100 -12.3 -4.61868 | gap 1 CAGTCACATACAAAA GATTG-GCTGGCTA ATC TAGCCAGCTCAACC CAACTTTGCAAGAAA rpmJ 4259160 - 4259044 - | 50S ribosomal protein L36 secY 4260526 - 4259195 - | preprotein translocase subunit SecY TERM 4672 4260217 - 4260247 + g 70 -9.7 -3.10715 | CTTCTTTCTTTATCT CTGCTAACGCTGG ATGAA CCACCGTCAGCAG TTGGATAATAATCGA rplO 4260968 - 4260534 - | 50S ribosomal protein L15 rpmD 4261151 - 4260972 - | 50S ribosomal protein L30 rpsE 4261657 - 4261154 - | 30S ribosomal protein S5 rplR 4262025 - 4261672 - | 50S ribosomal protein L18 rplF 4262568 - 4262035 - | 50S ribosomal protein L6 rpsH 4262975 - 4262583 - | 30S ribosomal protein S8 rpsN 4263314 - 4263009 - | 30S ribosomal protein S14 TERM 4673 4263272 - 4263293 + g 76 -8.7 -4.02021 | overlap 4263273 4263275 ATTTGTTAGCTAGTT TCACGCGAA CGAC TTCGCGTGC TTTCATTGATTGCTT TERM 4674 4263273 - 4263292 + g 81 -12.2 -3.00128 | overlap 4263272 4263275 TTTGTTAGCTAGTTT CACGCGAA CGAC TTCGCGTG CTTTCATTGATTGCT rplE 4263867 - 4263328 - | 50S ribosomal protein L5 TERM 4675 4263705 - 4263723 + g 73 -7.4 -4.30987 | opp_overlap 4263704, overlap 4263690 TTGCTGCCAAGTCAG CTGCTGCA TTG TCCAGCAG TTTCTTGTCAGCGAT rplX 4264196 - 4263882 - | 50S ribosomal protein L24 rplN 4264578 - 4264207 - | 50S ribosomal protein L14 TERM 4676 4264694 - 4264720 + r 78 -9.5 -3.69069 | opp_overlap 4264694, overlap 4264698 TATGGGTAGAAAAAA TAAACGGCCCA CTTTC TGAGCCGTTTA TTATGTTCGAGTTGG TERM 4677 4264720 - 4264694 - R 100 -11.7 -5.252 | opp_overlap 4264694 4264698 TATGGGTAGAAAAAA TAAACGGCCCA CTTTC TGAGCCGTTTA TTATGTTCGAGTTGG TERM 4678 4264698 - 4264716 + r 73 -5.9 -4.46073 | opp_overlap 4264694, overlap 4264694 GGTAGAAAAAATAAA CGGCCCA CTTTC TGAGCCG TTTATTATGTTCGAG rpsQ 4264998 - 4264744 - | 30S ribosomal protein S17 rpmC 4265189 - 4264998 - | 50S ribosomal protein L29 rplP 4265599 - 4265189 - | 50S ribosomal protein L16 rpsC 4266310 - 4265612 - | 30S ribosomal protein S3 TERM 4679 4266164 - 4266196 + g 74 -10 -3.61654 | overlap 4266165 GCGAGAAACGGAAGC TTTCGCTAATTCCT TAGTC AGGAATTGGCGAAC TTTAAAGTCGCTGTC TERM 4680 4266165 - 4266195 + g 85 -13.5 -2.76671 | overlap 4266164 CGAGAAACGGAAGCT TTCGCTAATTCCT TAGTC AGGAATTGGCGAA CTTTAAAGTCGCTGT rplV 4266660 - 4266328 - | 50S ribosomal protein L22 rpsS 4266953 - 4266675 - | 30S ribosomal protein S19 rplB 4267792 - 4266968 - | 50S ribosomal protein L2 TERM 4681 4267827 - 4267847 + r 80 -9.7 -3.57462 | opp_overlap 4267830, overlap 4267830 CTCTGCGCCGCCGAT GAAGTCCAG ATT CTGGCCTTC TTTCAGGGTGACGTA rplW 4268111 - 4267809 - | 50S ribosomal protein L23 rplD 4268713 - 4268108 - | 50S ribosomal protein L4 TERM 4682 4268681 - 4268693 + g 77 -10.5 -3.46872 | opp_overlap 4268676, overlap 4268680 TTCGGAAACAGTCAG CGCGC TTT GCGCG TCTTTCACTATTAAT rplC 4269353 - 4268724 - | 50S ribosomal protein L3 nusE 4269697 - 4269386 - | 30S ribosomal protein S10 TERM 4683 4270021 - 4269996 - R 100 -11.9 -4.38927 | gap 1, opp_overlap 4269996 TTTGCAGATAAGAAA GAGTGAG-GCCG ATA CGGCTCCCACTC TTTTAACTCAATATA TERM 4684 4269996 - 4270021 + r 88 -9.7 -4.20531 | gap 1, opp_overlap 4269996 TTTGCAGATAAGAAA GAGTGAG-GCCG ATA CGGCTCCCACTC TTTTAACTCAATATA bfr 4270551 - 4270078 - | bacterioferritin, iron storage and detoxification protein bfd 4270825 - 4270631 - | bacterioferritin-associated ferredoxin TERM 4685 4270930 - 4270915 - R 100 -11.8 -5.45652 | opp_overlap 4270910 4270915 ACGGGCAATAAAAAA GGGCGC CGAA GCGCCC TCTACTTGATCAATA TERM 4686 4270915 - 4270930 + r 86 -11.8 -2.94199 | opp_overlap 4270915, overlap 4270910 ACGGGCAATAAAAAA GGGCGC CGAA GCGCCC TCTACTTGATCAATA tufA 4272152 - 4270968 - | elongation factor Tu far 4274338 - 4272224 - | elongation factor G TERM 4687 4272267 - 4272313 + g 71 -8.2 -3.76224 | gap 3, overlap 4272267 TGAGCAATATTGCTT GG-CGCGTCATCATACTTCA-GG AACT CCATGGAGTAAGATG-CGCGGCC TTTAGTCAGTGAACG rpsG 4274902 - 4274432 - | 30S ribosomal protein S7 rpsL 4275373 - 4274999 - | 30S ribosomal protein S12 YE3931 4275798 - 4275511 - | tRNA 2-thiouridine synthesizing protein B YE3932 4276183 - 4275818 - | hypothetical protein TERM 4688 4276000 - 4276011 + g 77 -3 -5.28778 | AAGTAGCGATATAGT TTCT GGCG AGAA TTTTTTCTGGCTGCT YE3933 4276578 - 4276183 - | hypothetical protein YE3934 4277312 - 4276578 - | putative DNA-binding protein TERM 4689 4277499 - 4277522 + r 74 -9.5 -3.39327 | opp_overlap 4277499 ATACCGAAAAAAAAA CCGCCACGA CAATTA TCGCGGCGG TTATCAGTATAACCG TERM 4690 4277522 - 4277499 - R 100 -12.4 -6.13 | opp_overlap 4277499 ATACCGAAAAAAAAA CCGCCACGAC AATT ATCGCGGCGG TTATCAGTATAACCG fkpA 4278383 - 4277568 - | FKBP-type peptidyl-prolyl cis-trans isomerase TERM 4691 4277996 - 4278009 + g 78 -5.2 -4.88918 | overlap 4277985 TTTCGCGGTACTTAG CGCC TTTATC GGCG TTTTCTTTAGCATCC TERM 4692 4278037 - 4278050 + g 71 -6.7 -4.29432 | TCCTGCTTCATTTTA GCTTC AGCA GAAGC TTTTACTCGCGTTTC TERM 4693 4278284 - 4278325 + g 100 -16.7 -3.04144 | overlap 4278274 4278290 TTGTCGTTGCAGCCG CATCTGCAGCTTTAGCTGT TTCA GCAGCGAAAGCTGCAGAGG TATTCAGGGTCAGCG YE3936 4278667 - 4278882 + | hypothetical protein TERM 4694 4278913 - 4278884 - f 90 -12.9 -2.52516 | opp_overlap 4278890, overlap 4278890 CGCCCCACTATTAAG CAAAAAGCCAGCC GCAA GGCTGGCTTTCAG ACTGCTGACAAACCT TERM 4695 4278907 - 4278890 - f 100 -12.7 -4.90869 | opp_overlap 4278890, overlap 4278884 ACTATTAAGCAAAAA GCCAGCC GCAA GGCTGGC TTTCAGACTGCTGAC TERM 4696 4278890 - 4278907 + F 100 -12.7 -3.58343 | opp_overlap 4278890 4278884 ACTATTAAGCAAAAA GCCAGCC GCAA GGCTGGC TTTCAGACTGCTGAC TERM 4697 4278998 - 4278972 - g 73 -7.9 -3.97088 | gap 1, overlap 4278973 TGGCAGAAGAGTAAA GCGTCCGCGCCA TGGA CGGCGCGG-CTC GAGCCCCCAGGGAAG TERM 4698 4279096 - 4279079 - g 90 -12.7 -3.67976 | opp_overlap 4279079 GTCATTAACCTCAAA GCCAGCC GCAA GGCTGGC TTTTGACTGACCATG TERM 4699 4279079 - 4279096 + G 100 -12.7 -4.18494 | opp_overlap 4279079 GTCATTAACCTCAAA GCCAGCC GCAA GGCTGGC TTTTGACTGACCATG YE3937 4278942 - 4279106 + | hypothetical protein slyD 4279721 - 4279137 - | FKBP-type peptidyl-prolyl cis-trans isomerase YE3939 4280037 - 4279816 - | hypothetical protein kefB 4281860 - 4280052 - | glutathione-regulated potassium-efflux system protein KefB YE3941 4282417 - 4281863 - | glutathione-regulated potassium-efflux system ancillary protein KefG YE3942 4282769 - 4284685 + | putative ABC transporter ATP-binding protein TERM 4700 4284677 - 4284690 + F 83 -9.5 -4.07568 | ACCAAGCTGTTTGAA GCGGG GTAA CCCGC TTTTCAAAAAAACAC TERM 4701 4284726 - 4284703 - f 79 -3.2 -5.40072 | opp_overlap 4284705, overlap 4284705 CGCTTTTCAAAAAAA CACCTCATTA AGGA TAATAAGGTT ATGAGTAATAAGGAT TERM 4702 4284724 - 4284705 - f 70 -5.8 -4.34482 | opp_overlap 4284705, overlap 4284703 CTTTTCAAAAAAACA CCTCATTA AGGA TAATAAGG TTATGAGTAATAAGG YE3943 4284748 - 4285716 + | putative glycosyl transferase YE3944 4285808 - 4286785 + | putative sugar transferase tauD 4287662 - 4286814 - | taurine dioxygenase ssiC 4288462 - 4287659 - | taurine transporter subunit TERM 4703 4287945 - 4287931 - G 83 -7 -4.67256 | overlap 4287932 4287933 TAACAAACCATAAAA CCTGCC AGC GGCTGG CACCCAATGCGCGTG TERM 4704 4288287 - 4288277 - G 73 -8.2 -3.91897 | CGTGGCATCCATAAA GCCC TGT GGGC TGGCAATCACCAGTA tauB 4289313 - 4288546 - | taurine transporter ATP-binding subunit tauA 4290278 - 4289322 - | taurine transporter substrate binding subunit TERM 4705 4289560 - 4289574 + g 77 -6.4 -4.59853 | overlap 4289571 AAGCGCGAAAGCTGG CTCAGA TGC TCTGGG TTTTTAAGCCATTGA TERM 4706 4290480 - 4290456 - R 78 -9.5 -3.5944 | opp_overlap 4290456 4290457 4290479 AGTGACATCGCTAAA GGAATAAAAAA TTA TTCTTTATTCC TTTATGCGATAAGTG TERM 4707 4290456 - 4290480 + r 70 -7.3 -3.89822 | opp_overlap 4290456, overlap 4290457 4290479 AGTGACATCGCTAAA GGAATAAAAAA TTA TTCTTTATTCC TTTATGCGATAAGTG YE3949 4291425 - 4290637 - | hypothetical protein YE3950 4292173 - 4291571 - | putative ABC-transport protein TERM 4708 4292028 - 4292014 - G 70 -10 -3.17229 | overlap 4292012 ACGCCACCAGCAATA GCATGC TTT GCATGC CTAACATAATGCCTA TERM 4709 4292354 - 4292369 + G 71 -4.6 -4.56775 | GGCTGGTCAGGCGGA GGGTGC AACT GCAACC TTTTTGGCAACGGCT YE3951 4292275 - 4293255 + | putative hydrolase YE3952 4293252 - 4293488 + | hypothetical protein prk 4293630 - 4294499 + | phosphoribulokinase 1 YE3954 4295099 - 4294692 - | hypothetical protein TERM 4710 4296030 - 4296002 - g 71 -4 -4.8048 | gap 2 GGCGGATACTAAAAA TGCTGGAAGATCAA AAT CTGATCT-CC-GCA CACGGTAAAACGATT cap 4295434 - 4296066 + | cAMP-regulatory protein TERM 4711 4296078 - 4296101 + F 100 -11.7 -5.23292 | opp_overlap 4296078 TTAATTCCCTATAAA CCGGTGCTG CTACCT CGGCACCGG TTTTCTTTTGTGTGA TERM 4712 4296101 - 4296078 - f 81 -9.5 -3.87869 | opp_overlap 4296078 TTAATTCCCTATAAA CCGGTGCTG CTACCT CGGCACCGG TTTTCTTTTGTGTGA YE3956 4296139 - 4298259 + | hypothetical protein TERM 4713 4298282 - 4298267 - T 82 -6.8 -4.88293 | AAGCGTAAAAATAAA GAGGCC AAAA AGCCTC AGACTGCTGACAAAC TERM 4714 4298370 - 4298344 - T 73 -10.1 -2.97771 | gap 1, opp_overlap 4298349 4298350, overlap 4298343 GGTAGAAGAGTAAAG CG-TCCGCGCCA CGGA TGGCGCGGGTCG AGCCATCAGGGACGA TERM 4715 4298350 - 4298384 + T 73 -9.8 -3.06341 | opp_overlap 4298344 4298343, overlap 4298349 AGAGTAAAGCGTCCG CGCCACGGATGGCGCG GGT CGAGCCATCAGGGACG ATTTTACGGCGTCTT argD 4299693 - 4298476 - | bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein pabA 4300401 - 4299826 - | para-aminobenzoate synthase component II YE3959 4301885 - 4300422 - | hypothetical protein ppiA 4302636 - 4302067 - | peptidyl-prolyl cis-trans isomerase A (rotamase A) TERM 4716 4302349 - 4302367 + g 70 -2.4 -4.88918 | gap 1, overlap 4302352 ATCTGCTTCATTTTT GATCGGC GCTTTA GCCG-TC TTTTGTTTGAAATCG YE3961 4302989 - 4304302 + | putative glycosyl hydrolase TERM 4717 4304359 - 4304330 - f 72 -9.4 -3.07443 | TTATACTCTACGTAA TTGGAGTTGCAG TTCCCC CTGCAACTTCAA GTATGAAGGGGATTG YE3962 4304384 - 4305364 + | LacI family transcriptional regulator TERM 4718 4306697 - 4306713 + G 71 -8.7 -3.78775 | CTGACTTGCGGCACC GTCGGCA CCA TGCTGAC TTTCGTGGTCACAGG YE3963 4305677 - 4306861 + | hypothetical protein codA 4308218 - 4306911 - | cytosine deaminase nirB 4308487 - 4311033 + | nitrite reductase nirD 4311030 - 4311356 + | nitrite reductase small subunit TERM 4719 4311614 - 4311624 + G 80 -8.2 -4.32201 | opp_overlap 4311614 AACTGGCAAAAGAAA GCCC GCT GGGC TTTTGGATTGGTTCG TERM 4720 4311624 - 4311614 - g 88 -8.2 -4.66535 | opp_overlap 4311614 AACTGGCAAAAGAAA GCCC GCT GGGC TTTTGGATTGGTTCG nirC 4311547 - 4312353 + | nitrite transporter NirC cysG 4312558 - 4313976 + | siroheme synthase TERM 4721 4314010 - 4313995 - T 78 -10.4 -3.37071 | opp_overlap 4313989 4313985 4313984 4313985 AAATTTGAGTCAGAA GGGGGA AGGC TCCCCC TTCGAATGACTTATT trpS 4315073 - 4314033 - | tryptophanyl-tRNA synthetase gph 4315773 - 4315075 - | phosphoglycolate phosphatase rpe 4316443 - 4315766 - | ribulose-phosphate 3-epimerase TERM 4722 4315852 - 4315842 - G 71 -8.2 -3.69216 | overlap 4315840 GGCTGATTGAAAATA GCCG AAC CGGC AACAAACATATCTGC dam 4317359 - 4316547 - | DNA adenine methylase TERM 4723 4317006 - 4316983 - G 71 -9 -3.5594 | overlap 4316989 AATTCACCGCTCAAA TTATAACGGC ACAG ACCGTTATAA CAATGGCGATTCAAG TERM 4724 4317274 - 4317317 + g 77 -10.4 -3.53012 | gap 1, opp_overlap 4317270 4317273, overlap 4317277 4317278 GGCTCTATCAAGCAG TCTCCCGCTGGTAGATGGCGT CGA ATGTCATCAACCAGCGG-ATA TTTCCCACCAGCCCA TERM 4725 4317277 - 4317315 + g 93 -14.6 -3.34398 | opp_overlap 4317270 4317273, overlap 4317274 4317278 TCTATCAAGCAGTCT CCCGCTGGTAGATGGCGT CGA ATGTCATCAACCAGCGGA TATTTCCCACCAGCC TERM 4726 4317278 - 4317314 + g 100 -18.1 -2.60496 | opp_overlap 4317270 4317273, overlap 4317277 4317274 CTATCAAGCAGTCTC CCGCTGGTAGATGGCGT CGA ATGTCATCAACCAGCGG ATATTTCCCACCAGC YE3973 4318438 - 4317443 - | hypothetical protein TERM 4727 4317697 - 4317707 + g 80 -6.8 -4.66609 | GCAACGTAAAGTGGC TGCC AGG GGCA TTTTTCAATGCGCTG TERM 4728 4318055 - 4318035 - G 78 -11.1 -3.29144 | GGAGCGTTGGCAGAA GACTGCGGC GCG GCCTCAGTC GGTGTCGGAGAAATC TERM 4729 4318218 - 4318229 + g 71 -4.4 -4.81814 | ATGTTTCGCGCAGCA TCCA CATT TGGA TTTTGTTGTGATGCT aroB 4319668 - 4318580 - | 3-dehydroquinate synthase TERM 4730 4319327 - 4319305 - G 70 -7.7 -3.82261 | gap 1, overlap 4319308 CTTGAATAAAACGAA CACCGCGCTG ATAG CA-CGCGGCG GCAAAACCGGTCAGG aroK 4320246 - 4319725 - | shikimate kinase I YE3976 4321709 - 4320594 - | putative outer membrane porin HofQ TERM 4731 4320949 - 4320959 + g 73 -2.4 -5.0538 | TCTTTAAACTCAATC GTGG TCG CCCC TTTTTTACCCTGCGA TERM 4732 4321748 - 4321760 + r 70 -7.7 -3.6106 | opp_overlap 4321747 4321758 GGGCATCTTGAAACT CCAGT GAA ACTGG TTTGCCACTGTTGGC YE3976A 4322326 - 4321949 - | hypothetical protein YE3977 4322885 - 4322319 - | hypothetical protein YE3977A 4323426 - 4322878 - | hypothetical protein YE3978 4324343 - 4323426 - | hypothetical protein mrcA 4324418 - 4326973 + | peptidoglycan synthetase TERM 4733 4326995 - 4327019 + T 100 -10 -5.4505 | gap 1, opp_overlap 4326995 AGTCACTGCTGATAA GCCGGG-GGTC GCAA GATCACCCGGC TTTTTTATTCGAGCA nudE 4327600 - 4327043 - | ADP-ribose diphosphatase NudE YE3982 4328156 - 4330303 + | hypothetical protein TERM 4734 4330426 - 4330445 + F 83 -12.2 -2.62263 | overlap 4330415 CGCTGGCCCGCAGGG TGAGCCTC TGAT GAGGCTCA TAATCTCCAAGAGCT YE3983 4330551 - 4331228 + | hypothetical protein hslR 4331265 - 4331672 + | heat shock protein 15 TERM 4735 4331909 - 4331874 - g 83 -11.8 -3.53343 | opp_overlap 4331873 4331876 4331904 AACTGTTGGGTGAAA TGTTGGTCGCGACCAG TCTG CTGACCGCGACCCTCA AATTTGACGGTGATA hslO 4331780 - 4332616 + | Hsp33-like chaperonin TERM 4736 4332630 - 4332657 + F 79 -7.7 -4.33851 | AATTCTCGTAATACT TGGTTGGGTGC TGACTC GTGCCCAGCCA TTTCTTCTGCCGTTT pck 4332816 - 4334435 + | phosphoenolpyruvate carboxykinase TERM 4737 4334465 - 4334482 + T 100 -9.1 -5.61881 | opp_overlap 4334460 4334465 TGTAAGATGACAAAA GGGGCAC ATTG GTGTCCC TTTTTGTTTTTCACA TERM 4738 4334482 - 4334465 - T 76 -6.9 -4.55023 | opp_overlap 4334465, overlap 4334460 TGTAAGATGACAAAA GGGGCAC ATTG GTGTCCC TTTTTGTTTTTCACA TERM 4739 4334612 - 4334653 + T 100 -18.1 -3.18912 | overlap 4334613 4334616 CTTATCTCCGTAGCC TCAACCGCCAAAGGATGTG GCCG CGCGCCCTTTGGCGGTTGG TTCATCGGTGGCTAA TERM 4740 4334613 - 4334652 + T 100 -19.4 -2.51133 | overlap 4334612 4334616 TTATCTCCGTAGCCT CAACCGCCAAAGGATGTG GCCG CGCGCCCTTTGGCGGTTG GTTCATCGGTGGCTA TERM 4741 4334616 - 4334649 + T 100 -15.3 -3.40867 | overlap 4334613 4334612 TCTCCGTAGCCTCAA CCGCCAAAGGATGTG GCCG CGCGCCCTTTGGCGG TTGGTTCATCGGTGG glpR 4335475 - 4334717 - | DNA-binding transcriptional repressor GlpR glpG 4336347 - 4335511 - | intramembrane serine protease GlpG glpE 4336773 - 4336417 - | thiosulfate sulfurtransferase malT 4339620 - 4336909 - | transcriptional regulator MalT TERM 4742 4337293 - 4337271 - G 84 -13.4 -2.73681 | CATTGAGTTGAATTA GCTGGCGCAG CTG CTGCGCCATC ACCTCACCCTCAATC TERM 4743 4337603 - 4337613 + g 73 -8.2 -3.87075 | overlap 4337607 TGACGCAGCCAATTT GCCG CTG CGGC TTTGTCGCCAGTCAT TERM 4744 4341032 - 4341056 + G 71 -5 -4.4891 | gap 1 GCTGGGATGAAAAAC TGGTGC-GCAG CTTG CTGCCGCGTCA TTTTGTCATCATCAA TERM 4745 4342019 - 4342009 - g 71 -6.8 -4.28254 | GTTGAACAGGTAAAA GCCA TTC TGGC GCAAGGTTATAAGCC malP 4339939 - 4342344 + | phosphorylase TERM 4746 4343247 - 4343270 + G 71 -8.2 -3.70438 | opp_overlap 4343243, overlap 4343240 GGGTGGAAGTAGCCT GCATCAACAG GCCG CTTTTGATGC TTTGCATGCTCATTT TERM 4747 4343315 - 4343295 - g 73 -4.6 -4.7373 | overlap 4343298 TCATTTGAGTAAAAA CGACCCCA TGATG TGGGGCTG GCCAGTATGGCCGGA TERM 4748 4343640 - 4343660 + G 70 -2.5 -4.88407 | GGATCCGCACGTCAT GGCTGCT CGCGCTT ATCAGCC TTTTATTGATTTGTT malQ 4342357 - 4344453 + | 4-alpha-glucanotransferase TERM 4749 4344507 - 4344490 - T 79 -6.9 -4.59414 | overlap 4344491 GTATAAGAAGTAAAA GGGGGGA GAAA TCCCCCT GAATATGATGACAAA TERM 4750 4344506 - 4344491 - T 78 -10.4 -3.34564 | overlap 4344490 TATAAGAAGTAAAAG GGGGGA GAAA TCCCCC TGAATATGATGACAA TERM 4751 4344560 - 4344535 - T 74 -6.1 -4.55759 | gap 1, overlap 4344536 4344537 AAAATCAACAATAAA GC-CGGTGAGCC AAG GGCTTACCGTAC CTAGGGGCACTCCGG TERM 4752 4344557 - 4344537 - T 76 -11.1 -2.56982 | overlap 4344536 4344535 AATCAACAATAAAGC CGGTGAGCC AAG GGCTTACCG TACCTAGGGGCACTC YE3993 4345371 - 4344796 - | putative DNA uptake protein YE3994 4346114 - 4345431 - | gluconate periplasmic binding protein bioH 4346346 - 4347122 + | putative biotin biosynthesis protein YE3996 4347237 - 4347500 + | hypothetical protein TERM 4753 4347508 - 4347531 + T 78 -8.8 -3.75629 | opp_overlap 4347504, overlap 4347509 4347511 ATAAATAATATCATC AGGGATGCCC AAGT GGGCATCTCA TTTAACTTAACGATG TERM 4754 4347509 - 4347530 + T 89 -12.3 -2.85056 | opp_overlap 4347504, overlap 4347508 4347511 TAAATAATATCATCA GGGATGCCC AAGT GGGCATCTC ATTTAACTTAACGAT TERM 4755 4347511 - 4347528 + T 83 -11.3 -2.9732 | opp_overlap 4347504, overlap 4347509 4347508 AATAATATCATCAGG GATGCCC AAGT GGGCATC TCATTTAACTTAACG YE3997 4347786 - 4347538 - | hypothetical protein feoB 4350115 - 4347800 - | ferrous iron transport protein B feoA 4350433 - 4350209 - | ferrous iron transport protein A TERM 4756 4351054 - 4351036 - R 83 -8.8 -4.16767 | opp_overlap 4351036 AAGAACAATGACAAA GGGCCACA GAA TCTGGCCC TTAACTTGAGATATC teX 4353452 - 4351068 - | putative transcription accessory protein TERM 4757 4351956 - 4351933 - G 70 -9.6 -3.17319 | opp_overlap 4351932, overlap 4351931 GTCAAGCCAGCAACA CGAGTCAGTA ATGG TACTGACGCG GTGTTCAAGTCCACA YE4001 4354109 - 4353492 - | MFS family transporter YE4002 4354702 - 4354121 - | hypothetical protein TERM 4758 4354752 - 4354773 + H 70 -7.3 -3.89182 | opp_overlap 4354748 4354752 TAAGACATAAACTAA CCTCCCT CATGTTCC AGGGAGG TTTCGGTTATTATTG TERM 4759 4354910 - 4354929 + H 71 -2 -5.21236 | opp_overlap 4354914, overlap 4354911 4354914 AGTTAATGAATATTG ACAAGTGG TTGG CCACTCGC TTTTTGTTCTAAATT greB 4355133 - 4355630 + | transcription elongation factor GreB ompR 4355751 - 4356470 + | osmolarity response regulator envZ 4356467 - 4357819 + | osmolarity sensor protein TERM 4760 4357893 - 4357866 - f 71 -8.4 -3.53012 | opp_overlap 4357854 GGTTCGGTTGTTAAA GCAACGGAGTTT ACTT AACCTCCGTAGC CTCAACCGCCAAAGG TERM 4761 4357924 - 4357907 - f 73 -8.3 -3.60792 | opp_overlap 4357907 GCCTCAACCGCCAAA GGGTGCG GGCG CGCCCCC TTGTGGAATCCCGCG TERM 4762 4358052 - 4358035 - f 73 -8.4 -3.58343 | opp_overlap 4358035 CTCATGACGCCTAAA TCCGCC GTATAT GGCGGA TTTCCCTTGCTCCAT TERM 4763 4358035 - 4358052 + F 78 -9.1 -3.78597 | opp_overlap 4358035 CTCATGACGCCTAAA TCCGCCG TATA TGGCGGA TTTCCCTTGCTCCAT TERM 4764 4359364 - 4359342 - g 71 -7 -4.10657 | opp_overlap 4359342 CTATATTCTGCAAAA CGAAGACCAC CGT ATTGTCTTCG TCATTCCTTGGTTGG glpD 4358593 - 4360107 + | glycerol-3-phosphate dehydrogenase TERM 4765 4360133 - 4360175 + T 100 -16.7 -3.08133 | gap 1, opp_overlap 4360138 4360140, overlap 4360140 CCGTCATCTATCTGT TAAAAGACCCTCTTC-ACAG CTCA CTGTTGAAGAGGGTTTTTTA TTCGCTCAGTGAATA TERM 4766 4360170 - 4360138 - T 88 -10 -4.09864 | gap 1, opp_overlap 4360133 4360140, overlap 4360140 ATCTATCTGTTAAAA GACCCTCTTC-ACAG CTCA CTGTTGAAGAGGGTT TTTTATTCGCTCAGT TERM 4767 4360140 - 4360168 + T 100 -12.6 -5.4833 | gap 1, opp_overlap 4360138 4360140, overlap 4360133 CTATCTGTTAAAAGA CCCTCTTC-ACAG CTCA CTGTTGAAGAGGG TTTTTTATTCGCTCA TERM 4768 4360168 - 4360140 - T 100 -12.6 -3.64716 | gap 1, opp_overlap 4360140 4360133, overlap 4360138 CTATCTGTTAAAAGA CCCTCTTC-ACAG CTCA CTGTTGAAGAGGG TTTTTTATTCGCTCA glgP 4362649 - 4360202 - | glycogen phosphorylase glgA 4364125 - 4362695 - | glycogen synthase TERM 4769 4362830 - 4362813 - G 78 -5.5 -4.84311 | gap 1, overlap 4362817 CTCCACAGAACAAAA GCACGGCG AAT CGCC-CGC ACCAATGCTTGTGCA glgC 4365589 - 4364303 - | glucose-1-phosphate adenylyltransferase glgX 4367587 - 4365599 - | glycogen debranching enzyme glgB 4369772 - 4367589 - | glycogen branching enzyme TERM 4770 4370156 - 4370167 + H 95 -7.2 -5.4505 | CTGACACGATTTTTG GCCC CATA GGGC TTTTTTGTTAAAACA YE4014 4370269 - 4371966 + | hypothetical protein TERM 4771 4371962 - 4371978 + T 77 -6.5 -4.60487 | opp_overlap 4371960 TCACCGCAAGTGAGA GCTAACC CGC GGATAGC TTTTTGCGAGTAATG budR 4372859 - 4371963 - | putative transcriptional regulator TERM 4772 4373747 - 4373719 - g 79 -11 -3.48276 | CCTTTCCCCACAGAA TCTCAACAGCGC GATTT GCGCCGTAGAGA GCTAATCCGCCGCGC budA 4372967 - 4373752 + | alpha-acetolactate decarboxylase TERM 4773 4374329 - 4374314 - g 71 -6.8 -4.17556 | GATATTCTCAATAAA CCCATC ACCG GACGGG CGCTAATTCATCAAG TERM 4774 4374906 - 4374888 - g 73 -5.3 -4.52857 | ATCGTGCAGATAAAA TGAATGG TTTCG CCATCCA CCCACTGCGGCTGGT budB 4373792 - 4375471 + | acetolactate synthase TERM 4775 4375615 - 4375589 - T 74 -7.9 -3.9749 | gap 1, overlap 4375590 AGGTAGAAGAGTAAA GCGTCCGCGCCA GGGA CGGCGCGG-CTC GAGCCCCCAGGGAGG TERM 4776 4375850 - 4375871 + T 76 -9.5 -3.45023 | gap 1, opp_overlap 4375844 TGTCATTAAGCTCAA GCCCTGA-CT ATA AGATCAGGGC TTGTCATCATGATGA asd 4376999 - 4375896 - | aspartate-semialdehyde dehydrogenase TERM 4777 4376918 - 4376901 - G 75 -3.4 -5.05079 | gap 1, overlap 4376904 AGAAGTAGAGAAAAA GACCGGG CGGAT CCCG-TC AAAGTCGCGTTCTTC TERM 4778 4377181 - 4377203 + H 100 -11.3 -4.67123 | overlap 4377182 CCTAATATGTGACTT TGACTGGCG AGAAA CGCCAGTCG TTTTGATTATTTTGA TERM 4779 4377182 - 4377202 + H 95 -12.6 -3.38647 | overlap 4377181 CTAATATGTGACTTT GACTGGCG AGAAA CGCCAGTC GTTTTGATTATTTTG TERM 4780 4377242 - 4377258 + G 88 -8.7 -4.93968 | TGACAGAGATGATTG CGGCAAC GGT GTTGCTG TTTTTGATTATGGAT TERM 4781 4377278 - 4377292 + G 71 -2.8 -4.99035 | overlap 4377280 4377289 TGATTATGGATCCGC TGGGTA ATT TACCGA TTTTTATGTCGGTGC yhgN 4377235 - 4377819 + | dITP- and XTP- hydrolyzing protein YE4020 4378448 - 4377936 - | putative gluconokinase gntM 4378670 - 4379986 + | putative gluconate permease gntR 4381006 - 4380011 - | gluconate utilization system Gnt-I transcriptional repressor TERM 4782 4381085 - 4381052 - R 75 -8.3 -3.74693 | gap 1, opp_overlap 4381057, overlap 4381057 TGCCATTCTAGCAAA GAAAAGGGTATGGCGC GAT GCAC-ATACCCTTTTT TACATATACCCGTCA TERM 4783 4381057 - 4381080 + r 100 -8.2 -5.1287 | gap 1, opp_overlap 4381057 4381052 TTCTAGCAAAGAAAA GGGTATG-GCG CGA TGCACATACCC TTTTTTACATATACC TERM 4784 4381080 - 4381057 - R 100 -8.2 -4.93877 | gap 1, opp_overlap 4381057, overlap 4381052 TTCTAGCAAAGAAAA GGGTATGGCGC GAT GCAC-ATACCC TTTTTTACATATACC YE4023 4381994 - 4381299 - | hypothetical protein TERM 4785 4382169 - 4382153 - H 100 -9.4 -6.60239 | AAAAAGAAAAAAAAA GCCAGC ACCCG GCTGGC TAAGTAAACACTGGA TERM 4786 4382278 - 4382290 + H 100 -6.3 -5.75945 | AATCATTATCACTCT CACTT GTA AAGTG TTTTTTTTAGCCACT YE4024 4382381 - 4382881 + | hypothetical protein TERM 4787 4382926 - 4382871 - T 70 -3.6 -4.82901 | gap 4, overlap 4382873 4382885 TGGGGCGGATAAAAA TACCAGTCTAACCATCAGGGGATAAGTG ATAT CGCTTATCCCCTG-CGA-T-GACTGG-A TGCAGGCTGGCGGTG TERM 4788 4382925 - 4382873 - T 80 -8.7 -4.03995 | gap 3, overlap 4382871 4382885 GGGCGGATAAAAATA CCAGTCTAACCATCAGGGGATAAGTG ATAT CGCTTATCCCCTG-CGA-T-GACTGG ATGCAGGCTGGCGGT TERM 4789 4382916 - 4382885 - T 81 -11.6 -2.7419 | overlap 4382873 4382871 ATACCAGTCTAACCA TCAGGGGATAAGTG ATAT CGCTTATCCCCTGC GATGACTGGATGCAG YE4025 4383845 - 4382949 - | hypothetical protein idh 4384992 - 4383979 - | myo-inositol 2-dehydrogenase YE4027 4387012 - 4385072 - | putative thiamine pyrophosphate-dependent protein TERM 4790 4386376 - 4386359 - G 76 -11.3 -3.11459 | overlap 4386348 AATAGCATCAGCCAA CCTGCCA GCGC TGGCAGG TCGCCGGTCAAGGCG TERM 4791 4386764 - 4386775 + g 76 -2.2 -5.27335 | GGTACAAGCATAGAT TTGC TGAC GCAG TTTTTGTTTGGCGAA YE4028 4387501 - 4389402 + | putative carbohydrate kinase TERM 4792 4389420 - 4389448 + F 83 -11 -3.46563 | overlap 4389422 TTAAAACAGCTTTAG TGGCGCTGGCGT GGAAA ACGTCGGCGCTA TTATGCTGCTATCTG TERM 4793 4389422 - 4389446 + F 86 -11.4 -3.29987 | overlap 4389420 AAAACAGCTTTAGTG GCGCTGGCGT GGAAA ACGTCGGCGC TATTATGCTGCTATC YE4029 4389687 - 4390520 + | hypothetical protein TERM 4794 4390589 - 4390569 - T 79 -6.9 -4.71426 | opp_overlap 4390564 4390569 TGGCGAGCAATAAAA TGGGTAG GATCTAT CTACCCA TTCAATTCATACTTT YE4030 4391439 - 4390615 - | hypothetical protein YE4031 4393000 - 4391495 - | putative aldehyde dehydrogenase YE4032 4394759 - 4393545 - | hypothetical protein TERM 4795 4394423 - 4394413 - G 80 -6.8 -4.77567 | ATCCCGATAACAAAA CTGG TTA CCAG CAATGCATTTATACC TERM 4796 4394861 - 4394837 - H 82 -7.9 -4.54727 | GCCTGGAAAGTAAAA CTGTTATACGC TTA ACGTATGACAG AACCTAATGTACCTG YE4033 4394855 - 4395808 + | LysR family transcriptional regulator YE4034 4396053 - 4396757 + | hypothetical protein btuR 4397607 - 4397017 - | cob(i)alamin adenosyltransferase fumB 4399275 - 4397629 - | fumarate hydratase class I, anaerobic TERM 4797 4398654 - 4398675 + g 77 -4.5 -4.95484 | gap 1, overlap 4398657 TTAGAAAGGCCTTGA GCT-TTTTGG GTT CCAGAATAGC TTTTGTTTCCTGGTA TERM 4798 4399488 - 4399502 + r 71 -4.3 -4.82128 | CAAAAAAACACGCTA TTCTC TTAAC GAGAA TTTTATATTTAATCA YE4037 4400464 - 4399544 - | LysR family transcriptional regulator cobA 4400906 - 4401688 + | uroporphyrin-III C-methyltransferase pduX 4401710 - 4402591 + | PduX TERM 4799 4402788 - 4402808 + F 76 -2.7 -5.27709 | opp_overlap 4402800, overlap 4402789 4402800 CATTTAAGATGATGA TTTTATTTA AAA TAAATTAAA TTTATTTTTTTATAA TERM 4800 4402800 - 4402812 + F 89 -3.5 -5.69473 | opp_overlap 4402800, overlap 4402789 4402788 TGATTTTATTTAAAA TAAAT TAA ATTTA TTTTTTTATAATCTG TERM 4801 4402922 - 4402902 - f 73 -9.7 -3.02516 | opp_overlap 4402903, overlap 4402901 ACAAACCAATGAAAT CCCAGCTAG CCA CTAGCTGGT TTTATATAGAGCACG TERM 4802 4402903 - 4402921 + F 100 -13.2 -4.52589 | opp_overlap 4402902 4402901 CAAACCAATGAAATC CCAGCTAG CCA CTAGCTGG TTTTATATAGAGCAC mamA 4403047 - 4403493 + | methylaspartate mutase subunit S mutL 4403490 - 4404881 + | glutamate mutase mutE 4404896 - 4406341 + | methylaspartate mutase E chain YE4043 4406341 - 4407585 + | methylaspartate ammonia-lyase YE4044 4407587 - 4408960 + | hypothetical protein YE4045 4408957 - 4409274 + | hypothetical protein TERM 4803 4409468 - 4409450 - g 79 -2.4 -5.40004 | opp_overlap 4409452, overlap 4409442 4409452 TATGAAATCAAAAAA TTTGACCA CAA TGATCATA TTGGGTCTGATAATA YE4046 4409436 - 4410761 + | sodium-dicarboxylic acid transporter TERM 4804 4410823 - 4410800 - T 100 -13.9 -3.84587 | ATCAGGGAAACATAA CCCCAGGCT GACATA AGCCTGGGG TCGATGACTGAGTAG YE4047 4412047 - 4410848 - | hypothetical protein YE4048 4412359 - 4413855 + | phosphate transport protein TERM 4805 4413903 - 4413940 + T 70 -3.5 -4.82901 | gap 1, opp_overlap 4413907 4413912, overlap 4413912 AACTCGAATTTGAAA TAAATAAAA-GGCGGCCT TAT AGGTCGCCTTTTTACCTG TTTTTATGCCAAAAG TERM 4806 4413935 - 4413907 - T 100 -10.3 -4.46233 | opp_overlap 4413903 4413912, overlap 4413912 CGAATTTGAAATAAA TAAAAGGCGGCCT TAT AGGTCGCCTTTTT ACCTGTTTTTATGCC TERM 4807 4413930 - 4413912 - T 100 -10.2 -5.18866 | opp_overlap 4413903 4413912, overlap 4413907 TTGAAATAAATAAAA GGCGGCCT TAT AGGTCGCC TTTTTACCTGTTTTT TERM 4808 4413912 - 4413930 + T 100 -12.4 -4.81752 | opp_overlap 4413912 4413907, overlap 4413903 TTGAAATAAATAAAA GGCGGCCT TAT AGGTCGCC TTTTTACCTGTTTTT uspB 4414297 - 4413962 - | universal stress protein UspB uspA 4414990 - 4415436 + | universal stress protein A TERM 4809 4415476 - 4415494 + F 100 -13.1 -5.31275 | CATCATCACCTCTCA CGCCCGC CTTTA GCGGGCG TTTTTTATGCTAAAC gdhA 4415700 - 4417043 + | glutamate dehydrogenase YE4052 4417247 - 4418725 + | metalloprotease YE4053 4419609 - 4418851 - | putative methyltransferase TERM 4810 4419556 - 4419573 + g 88 -14.1 -2.71364 | opp_overlap 4419556 AGCCAGAATAGACAA GGCGCCG GGAT CGGCGCC TGCTTCAGACAATAA TERM 4811 4419573 - 4419556 - G 95 -14.1 -3.7319 | opp_overlap 4419556 AGCCAGAATAGACAA GGCGCCG GGAT CGGCGCC TGCTTCAGACAATAA opdA 4421655 - 4419613 - | oligopeptidase A TERM 4812 4422513 - 4422503 - g 73 -5.4 -4.58773 | CGTATGAAATGAAAA CTGA TTA TCAG GATGTGGTGAAAGGT YE4055 4421992 - 4422834 + | hypothetical protein TERM 4813 4423798 - 4423788 - g 80 -6.8 -4.7254 | overlap 4423789 4423790 AGCGGTTATCAAAAA TGCC GAT GGCA GCCTGACACTGCAAT gor 4423078 - 4424430 + | glutathione reductase TERM 4814 4424451 - 4424476 + T 100 -11.3 -5.59655 | CTAAAAGCACGCTAA GGCTATAAACT GCAT GGTTTATAGCC TTTTTTATTGCTTTG TERM 4815 4424700 - 4424674 - T 100 -16.6 -5.50499 | TGATAGCTAAAAAAA TCAGGCCAGAGC TAA GCCCCGGCCTGA AAGTCATACTGTAAC yapE 4427969 - 4424724 - | putative autotransporter protein TERM 4816 4426671 - 4426659 - G 78 -9.1 -3.99228 | AGACGAACCGATAAA GGTGC CGA GCACC ATGCCTGAAGCACCG TERM 4817 4427339 - 4427355 + g 71 -6.5 -4.14977 | opp_overlap 4427330, overlap 4427332 4427330 TATAAACCCCGGTGC CACTGGC ACT GCTGGTG TTATTTATGGTGTTA TERM 4818 4428131 - 4428156 + H 82 -8.4 -4.2558 | AATATTTTTAATATG GGACTACATG CCAAAA TATGTAGTCC TTTTCCTACAAAATA TERM 4819 4428881 - 4428898 + G 71 -2.7 -4.90778 | gap 1 TCAGGAAAAGTTCTA TTAC-CGC TAT GCGCGTGA TTTTGTTTCGCTCAC TERM 4820 4429136 - 4429125 - g 81 -3.6 -5.4756 | AAGCCGAAGAAAAAA GCAC TGTT GCGC GGCACCCTGATTGCC TERM 4821 4429143 - 4429159 + G 73 -7.3 -4.15565 | CTGTTGCGCGGCACC CTGATTG CCG CAATCGG TTTTGAAATCATCAA TERM 4822 4429206 - 4429228 + G 78 -7.7 -4.43879 | gap 1 ATGCTGCCGCGTCTT GCCAGCTCTC CATC GGGAGC-GGC TTTTGGTTCAGTCAT TERM 4823 4429245 - 4429256 + G 88 -7.2 -5.1286 | TTTGGTTCAGTCATC GGCC TAAT GGCC TTTTTCTACTTTTTC YE4060 4428381 - 4429370 + | hypothetical protein cdh 4429436 - 4430158 + | CDP-diacylglycerol pyrophosphatase YE4062 4432283 - 4430163 - | hypothetical protein TERM 4824 4431063 - 4431074 + g 78 -5.8 -4.81083 | TTGTCGGCTGCGCTC GCCA CGAT TGGC TTTTTCCTGATTGGA YE4063 4433178 - 4432402 - | EAL domain-containing protein TERM 4825 4433031 - 4433019 - G 73 -5.5 -4.58663 | overlap 4433021 ATGAGGGGTGAAAAA CTGCC GTA AGCAG CTCGATAGCCAGCAG TERM 4826 4433497 - 4433485 - g 77 -2.6 -5.31275 | GCGGAGCAGAAAAAA CAGC TGATC GCCG GAGTGACCCAACTGT YE4064 4433428 - 4433628 + | putative tautomerase TERM 4827 4433701 - 4433683 - f 79 -3.2 -5.34555 | opp_overlap 4433684, overlap 4433676 4433684 CTATATCATAAAAAA TTTAAAAC GTC GTTTTAAT ACTATTGACTCTAAC TERM 4828 4434563 - 4434550 - g 74 -6.7 -4.32857 | overlap 4434552 CTGCCGAAAGAGAAA GTGGT CGAT ACCAC CGCGGCTGGGGATTC TERM 4829 4434691 - 4434712 + G 72 -10.1 -2.94962 | overlap 4434686 CGCGGCGCCATCATC CCACTGGCA GCCA TGCCAGCGG TGTGATTGATAATAT kdgK 4433773 - 4434717 + | 2-dehydro-3-deoxygluconokinase YE4066 4436382 - 4434877 - | insulinase family protease TERM 4830 4434913 - 4434940 + g 76 -11.2 -3.21276 | overlap 4434912 4434914 CGCGGGCGCGGCTTC AGCAGCACCTGC CGCA GCTGGTGCTGCA TCTTCTGGCACCACG TERM 4831 4434914 - 4434939 + g 89 -14.7 -2.52623 | overlap 4434913 4434912 GCGGGCGCGGCTTCA GCAGCACCTGC CGCA GCTGGTGCTGC ATCTTCTGGCACCAC TERM 4832 4436516 - 4436498 - R 95 -13.2 -3.15663 | ACTCATCGGGATTAA TGAGCCTC TTT GAGGCTCA CCCTACGGGCTAGCT dctA 4438158 - 4436866 - | C4-dicarboxylate transporter DctA YE4068 4439015 - 4438536 - | hypothetical protein TERM 4833 4439099 - 4439060 - R 71 -7 -4.08064 | gap 1, opp_overlap 4439084 4439085, overlap 4439074 4439076 AACCCGTGGGTAAAA GCGCCGGGCAAGCAGACCC TGG GAAGCCGCT-GCTCGGCAC TTTTTACCAACAGCG TERM 4834 4439101 - 4439142 + r 71 -8.6 -3.55622 | opp_overlap 4439076 4439074 4439110, overlap 4439103 4439104 CCGCTGCTCGGCACT TTTTACCAACAGCGGCCC CAGCAC GGGCCGCTGTCGGGACTA TTTACGGCCGTTCGG TERM 4835 4439103 - 4439140 + r 81 -11.2 -3.35522 | opp_overlap 4439076 4439074 4439110, overlap 4439101 4439104 GCTGCTCGGCACTTT TTACCAACAGCGGCCC CAGCAC GGGCCGCTGTCGGGAC TATTTACGGCCGTTC TERM 4836 4439104 - 4439139 + r 100 -14.7 -2.60992 | opp_overlap 4439076 4439074 4439110, overlap 4439103 4439101 CTGCTCGGCACTTTT TACCAACAGCGGCCC CAGCAC GGGCCGCTGTCGGGA CTATTTACGGCCGTT TERM 4837 4439133 - 4439110 - R 100 -15.3 -3.14931 | opp_overlap 4439104 4439103 4439101, overlap 4439076 4439074 GGCACTTTTTACCAA CAGCGGCCC CAGCAC GGGCCGCTG TCGGGACTATTTACG pelY 4440858 - 4439140 - | periplasmic pectate lyase precursor TERM 4838 4439910 - 4439895 - G 72 -6 -4.31433 | opp_overlap 4439895 4439901 CATTTTCAGAATAAA GGGTGC TGGT GCGCCC TTTGAGCATCATATT YE4070 4441639 - 4440935 - | hypothetical protein TERM 4839 4442083 - 4442096 + r 80 -3.9 -5.35815 | overlap 4442080 GCGAAGTGGATATTT TAGAT TAAA ATCTA TTTTTATTTAATATA YE4071 4443891 - 4442362 - | hypothetical protein TERM 4840 4444057 - 4444092 + r 79 -3.2 -5.252 | opp_overlap 4444068 TTTCCTATCAAGATC GCAACGTCAAAGTGCT ATTA AACACGATGAAGTTGC TTTTTTATGCAAATA bcsC 4447607 - 4444122 - | cellulose synthase subunit BcsC TERM 4841 4445491 - 4445525 + g 100 -10.6 -4.87665 | overlap 4445486 4445488 GGTGCGCCTTTGGCG GCAGCCGGTTTCAACC GTT GGAAGATATCGGCTGC TTTTTGTGGATCACC TERM 4842 4446378 - 4446388 + g 77 -6.8 -4.4891 | overlap 4446376 TGCTTGCTGGTAATG CTGC TCG GCAG TTTTATCATCATGAC TERM 4843 4447572 - 4447587 + g 73 -4.6 -4.77698 | overlap 4447574 TTGAGGCAATAACGC CAGGCT TAAC AGCCAG TTTATTTTAATGTTG bcsZ 4448716 - 4447589 - | endo-1,4-D-glucanase TERM 4844 4447819 - 4447839 + g 76 -8.3 -4.11216 | opp_overlap 4447818 4447822, overlap 4447822 ATGCCGCCGAAAAGC CAACCGG CCCATCA CCGGTTG TTTTGCCAGTCAACG TERM 4845 4448019 - 4448029 + g 77 -6.8 -4.55887 | overlap 4448017 GGGTGAGTTTCATCC GGCT GCC AGCC TTTATCTTTTTGCCA TERM 4846 4448681 - 4448649 - G 71 -9.2 -3.50853 | gap 1, opp_overlap 4448667, overlap 4448667 GCTGGCCAATCACAA GCTGCTGCGGTACCA AAAC TGGCAA-GCAGCAGC AGGATGCATACCAGT bcsB 4451028 - 4448722 - | cellulose synthase regulator protein bcsA 4453663 - 4451036 - | cellulose synthase catalytic subunit TERM 4847 4453342 - 4453360 + g 93 -8 -5.252 | TTACCCAACCTTTAC CGGCGGCC GCT GGCTGACG TTTTTTATCACCATC bcsF 4454397 - 4453660 - | hypothetical protein YE4076 4454592 - 4454401 - | hypothetical protein TERM 4848 4454874 - 4454895 + G 71 -4.5 -4.64861 | gap 1, opp_overlap 4454874 TCTATTGGGTCAATA TTGAGCGTCA AGT TGATGC-CAA TTTATTTTGCCAGCA bcsE 4454789 - 4456348 + | hypothetical protein bcsG 4456536 - 4458188 + | hypothetical protein TERM 4849 4458232 - 4458214 - T 77 -10.3 -3.20435 | opp_overlap 4458214 TTAAGGATTTATTAA GGGTGCA TCTAT TGCACCC TTTTTATTCAGTTGT TERM 4850 4458214 - 4458232 + T 100 -10.3 -5.14645 | opp_overlap 4458214 TTAAGGATTTATTAA GGGTGCA TCTAT TGCACCC TTTTTATTCAGTTGT TERM 4851 4458495 - 4458480 - T 100 -11.8 -5.28176 | opp_overlap 4458480 TTCAGCTATAAAAAA CGCCGG ATAA CCGGCG TTTTCTGCTAACTGT TERM 4852 4458480 - 4458495 + T 100 -11.8 -4.48072 | opp_overlap 4458480 TTCAGCTATAAAAAA CGCCGG ATAA CCGGCG TTTTCTGCTAACTGT dppE 4459388 - 4458531 - | dipeptide transport ATP-binding protein dppD 4460530 - 4459550 - | dipeptide transporter ATP-binding subunit dppC 4461446 - 4460544 - | dipeptide transporter dppB 4462476 - 4461457 - | dipeptide transporter permease DppB TERM 4853 4462817 - 4462785 - R 100 -12.8 -4.48713 | opp_overlap 4462785 GGTATCAATAAGAAA CCGGCGAATATGCG TATTC CACACATTCACCGG TTGTCTACAGGGTTA dppA 4464443 - 4462836 - | periplasmic dipeptide transport protein TERM 4854 4463497 - 4463538 + g 70 -2.2 -4.8543 | gap 2, overlap 4463520 GCTTGCTTGTTAACG GCCA-TGGTCAGCG-CTTGG CGAA CCTTGACGTTGTCCAGTGGC TTTTTCTCAACGTTG TERM 4855 4463588 - 4463602 + g 88 -8.6 -4.84673 | TCAGGCCCGGTTGCT CCATCA AAT TGATGG TTTTGTCTTCTTTCA YE4084 4466508 - 4465126 - | hypothetical protein YE4085 4468162 - 4466537 - | putative hemolysin activator protein TERM 4856 4468215 - 4468235 + r 73 -10.5 -2.53015 | opp_overlap 4468215 ATGTCATCAGAACAA TTAGCCACG ATA TGTGGCTAA TGACTTAACCAATAT TERM 4857 4468235 - 4468215 - R 84 -9.8 -3.84674 | opp_overlap 4468215 ATGTCATCAGAACAA TTAGCCAC GATAT GTGGCTAA TGACTTAACCAATAT YE4086 4469404 - 4468292 - | hypothetical protein TERM 4858 4469619 - 4469600 - R 100 -10.8 -5.9663 | opp_overlap 4469600 AAAGACGAAAAAAAA CCCTGATA TTGC TATCAGGG TTCTTAAATTTGGTC TERM 4859 4469600 - 4469619 + r 88 -10.8 -3.78904 | opp_overlap 4469600 AAAGACGAAAAAAAA CCCTGATA TTGC TATCAGGG TTCTTAAATTTGGTC TERM 4860 4469796 - 4469762 - R 70 -9.4 -2.77344 | gap 1, overlap 4469761 TCACTTTTTAACAAC CCGCTGGTGACTGTT GTTAAA AGCA-TCACCAGCGG TTAAAACTGAATCAG TERM 4861 4469838 - 4469823 - R 75 -3.2 -5.08601 | opp_overlap 4469824, overlap 4469824 TCAGTTGAATAAAAA TCAAGC TTCA GCTTGT TTCAACTGTGGCGAT uhpC 4471154 - 4469823 - | regulatory protein UhpC TERM 4862 4470023 - 4470006 - G 76 -9.1 -3.95051 | opp_overlap 4470013 GAATAACCCCACAAA GCCAGTG GCAG CACCGGC AGCATCTTTATGTGA uhpB 4472777 - 4471248 - | sensory histidine kinase UhpB uhpA 4473364 - 4472774 - | two-component system response regulator yhjW 4475167 - 4473476 - | phosphoethanolamine transferase TERM 4863 4473502 - 4473518 + g 70 -8 -3.90761 | opp_overlap 4473498 4473497 GCTGAGAAGACCGGG CTGGTG CCTGA CACCAG TTATTCTCTGCATTA TERM 4864 4474968 - 4474952 - G 78 -7.9 -4.40804 | GACTACGCGATAAAA CCATCGG CCA CCGAGGG AAATGATGCGCATAA TERM 4865 4475383 - 4475406 + r 79 -8.2 -4.18018 | opp_overlap 4475382 TGGCGGAGAGTATAT GCCCACAAAA TAAT TTTTATGGGC TTTTGCGTGCGGAGA YE4091 4475852 - 4475427 - | putative osmotic/stress related protein TERM 4866 4475942 - 4475926 - R 100 -10.8 -4.77438 | opp_overlap 4475926 ACTCATTATGAAAAA GCCCCC AATCG GGGGGC TTTAGACTGCTGACA TERM 4867 4475926 - 4475942 + r 84 -10.8 -3.62096 | opp_overlap 4475926 ACTCATTATGAAAAA GCCCCC AATCG GGGGGC TTTAGACTGCTGACA TERM 4868 4476098 - 4476071 - R 86 -11.3 -3.25942 | opp_overlap 4476077, overlap 4476059 4476072 ATGGGTTTACATCAA CCTCAAGCCCC AAACTG GGGGCTTGAGT AGCACTATCATTTAG TERM 4869 4476097 - 4476072 - R 100 -14.8 -2.55351 | opp_overlap 4476077, overlap 4476071 TGGGTTTACATCAAC CTCAAGCCCC AAACTG GGGGCTTGAG TAGCACTATCATTTA YE4092 4477587 - 4476124 - | hypothetical protein TERM 4870 4476670 - 4476686 + g 75 -3.6 -5.05116 | opp_overlap 4476670 CTGGAAGGTCAAAAT TGGCGG CAGTT CAGCCA TTTTATTGTTTCTGG TERM 4871 4477337 - 4477347 + g 80 -6.8 -4.67011 | overlap 4477325 AACGGAACCTGAGTG CTGG GTT CCAG TTTTTCGGTAACATT TERM 4872 4477842 - 4477803 - R 88 -12.4 -2.71712 | gap 1, opp_overlap 4477795, overlap 4477807 CGCCCTGCCTCAAAG TAAATCGGGCCGCAGAT GTGATTA AT-TGCGGCCCGATTCA GCATGACGATTGCTA TERM 4873 4477838 - 4477807 - R 90 -11 -4.05788 | gap 1, opp_overlap 4477795, overlap 4477803 CTGCCTCAAAGTAAA TCGGGCCGCAGAT GTGATTA AT-TGCGGCCCGA TTCAGCATGACGATT YE4093 4479252 - 4477855 - | amino acid permease TERM 4874 4479326 - 4479300 - R 91 -13 -2.87564 | GCAGGGGTTCAGAGA GGGTGATCCCAG TTA CCGGGATCACCT ATAGGCCAATGTTTT hutH 4480885 - 4479362 - | histidine ammonia-lyase hutU 4482585 - 4480894 - | urocanate hydratase YE4096 4482824 - 4482645 - | hypothetical protein TERM 4875 4482909 - 4482894 - R 74 -6.8 -4.24948 | opp_overlap 4482903 TTACGACATTCAAAA TGCAGG ATTT CCCGCA GGCAAACTGCGGACT YE4097 4483127 - 4482954 - | hypothetical protein TERM 4876 4483124 - 4483114 - G 83 -6.8 -4.92828 | opp_overlap 4483113 AAAGGTAAAAAGAAA GTGG GTG CCAC CATTAATAAATCATA TERM 4877 4483208 - 4483179 - R 100 -8.8 -5.74086 | AAATTAAATAAAAAA CTGGCTTATATT TTTCTT AATATAAACCAG AAATAACTATATTAT manA 4484416 - 4483223 - | mannose-6-phosphate isomerase TERM 4878 4484161 - 4484151 - G 75 -3.2 -5.14965 | ATTTTCAGTAAAAAA GGTA GAT CACC GAAACGATCCGCAGT bglA 4485838 - 4484438 - | beta-glucosidase TERM 4879 4485874 - 4485854 - R 71 -9.7 -2.72558 | ACAACCTCCTAAGGA TTCCGGTGC CTG GCACCTGAA AAAGGCTGCGCCAGT TERM 4880 4485901 - 4485878 - R 100 -9.5 -4.62069 | overlap 4485879 CTGGCACCTGAAAAA GGCTGCGCC AGTGAA GGCGCAGCG AAAAAAACTATTCTG TERM 4881 4485900 - 4485879 - R 100 -13 -3.3692 | overlap 4485878 TGGCACCTGAAAAAG GCTGCGCC AGTGAA GGCGCAGC GAAAAAAACTATTCT YE4100 4488104 - 4485909 - | beta-1,4 mannanase TERM 4882 4486079 - 4486089 + g 75 -3.2 -5.06414 | GATTATCACTGTTTA CTTG AAT CGAG TTTTTCTTACCGCCC TERM 4883 4487431 - 4487441 + g 80 -6.8 -4.78107 | TTACCCGTTTCCCAA GCCA TAA TGGC TTTTTCATCATAATA YE4101 4489446 - 4488112 - | putative outer membrane porin TERM 4884 4488493 - 4488505 + g 81 -3.3 -5.36364 | TTTCTCATCGCTGCT CCACC AAC GGTAG TTTTTATCTTTTTGG YE4102 4490964 - 4489690 - | putative cellobiose-specific phosphotransferase TERM 4885 4490099 - 4490070 - G 74 -4.2 -4.84359 | overlap 4490071 4490073 GCATCGCCATAAAAA CCAGCGGCAATG TTGAGC CAATGCCGCCAA TTAATAAGTAAAAAT TERM 4886 4491066 - 4491089 + H 84 -11.2 -3.68827 | opp_overlap 4491062 4491070, overlap 4491070 CATTTAAATGATCCA TAAACGGAAA GCGC TTTCCGTTTA TTTCCATCATGGCTA TERM 4887 4491085 - 4491070 - H 74 -7.6 -3.96224 | opp_overlap 4491066 4491070, overlap 4491062 TAAATGATCCATAAA CGGAAA GCGC TTTCCG TTTATTTCCATCATG TERM 4888 4491070 - 4491085 + H 82 -7.6 -4.47183 | opp_overlap 4491062 4491070, overlap 4491066 TAAATGATCCATAAA CGGAAA GCGC TTTCCG TTTATTTCCATCATG YE4103 4491149 - 4491463 + | pts system, cellobiose-specific IIB component TERM 4889 4491536 - 4491520 - g 81 -3.5 -5.4833 | overlap 4491499 4491521 4491523 4491524 TGATTGAACAAAAAA TCACGCC AAT GGCGGGC GCAATTGGCCAGCAG YE4104 4491474 - 4492799 + | putative phosphotransferase protein YE4105 4492830 - 4493132 + | putative phosphotransferase protein TERM 4890 4493156 - 4493184 + F 81 -7.4 -4.69622 | opp_overlap 4493158, overlap 4493157 4493158 CAAATGTCATGTTAT AAGTCAGAGAGG CATAT CCTCTCTGACCA TTTTTGAAGTTCTCT TERM 4891 4493157 - 4493183 + F 83 -10.9 -3.40689 | opp_overlap 4493158, overlap 4493156 4493158 AAATGTCATGTTATA AGTCAGAGAGG CATAT CCTCTCTGACC ATTTTTGAAGTTCTC TERM 4892 4493158 - 4493182 + F 100 -14.4 -2.6369 | opp_overlap 4493158, overlap 4493157 4493156 AATGTCATGTTATAA GTCAGAGAGG CATAT CCTCTCTGAC CATTTTTGAAGTTCT TERM 4893 4493182 - 4493158 - f 100 -14.4 -3.3334 | opp_overlap 4493157 4493156 4493158 AATGTCATGTTATAA GTCAGAGAGG CATAT CCTCTCTGAC CATTTTTGAAGTTCT YE4106 4493211 - 4494113 + | putative ROK family protein TERM 4894 4494388 - 4494373 - g 71 -9 -3.53012 | opp_overlap 4494366 GTTTTGCCGCCCAAA GTCTGG CCAG CCAGAC TTCCAGCTACGTTGG YE4107 4494216 - 4495178 + | putative transcriptional regulator YE4108 4495673 - 4495212 - | hypothetical protein TERM 4895 4495766 - 4495734 - R 100 -18.7 -4.17762 | opp_overlap 4495739, overlap 4495739 CAGGCCCCAAAATAA TAAAAGCCCCGACTA CAC TAGTCAGGGCTTTTA AGGTACTACACATTT TERM 4896 4495739 - 4495761 + r 100 -12 -4.15565 | opp_overlap 4495734 4495739 CCCAAAATAATAAAA GCCCCGACTA CAC TAGTCAGGGC TTTTAAGGTACTACA TERM 4897 4495761 - 4495739 - R 100 -14.2 -5.093 | opp_overlap 4495739, overlap 4495734 CCCAAAATAATAAAA GCCCCGACTA CAC TAGTCAGGGC TTTTAAGGTACTACA TERM 4898 4496667 - 4496647 - R 86 -10.4 -3.76125 | gap 1 GGAGCTGAATCGAAA CGGGCC-GC TGCT GCTGGCCCG TAAGAGGATAACTTT YE4109 4497812 - 4496817 - | hypothetical protein YE4110 4498296 - 4497889 - | hypothetical protein TERM 4899 4498495 - 4498480 - R 75 -9 -3.60792 | opp_overlap 4498480 TTCTTAATCTTTAAA GGCATC TCAC GATGCC TTTTTACATTTAGAG TERM 4900 4498480 - 4498495 + r 100 -9 -4.81249 | opp_overlap 4498480 TTCTTAATCTTTAAA GGCATC TCAC GATGCC TTTTTACATTTAGAG YE4111 4498793 - 4498512 - | hypothetical protein TERM 4901 4499231 - 4499215 - H 70 -9.5 -2.79501 | opp_overlap 4499215 4499230 CATACTCTCACCATA TGTCGAT TGT ATCGACA TGTATTCACAACATG TERM 4902 4499215 - 4499231 + H 71 -9.5 -3.07013 | opp_overlap 4499215, overlap 4499230 CATACTCTCACCATA TGTCGAT TGT ATCGACA TGTATTCACAACATG TERM 4903 4499283 - 4499303 + H 74 -6.9 -4.38171 | overlap 4499266 4499285 4499294 GACACGTAATCACTA TGTGTCGAT TGC ATCGACATG TTTTCATGTCATGTA TERM 4904 4499285 - 4499301 + H 81 -9.5 -3.78877 | overlap 4499266 4499283 4499294 CACGTAATCACTATG TGTCGAT TGC ATCGACA TGTTTTCATGTCATG TERM 4905 4499849 - 4499838 - g 76 -2.2 -5.20216 | opp_overlap 4499847 GACAGCATTAAAAAA CCAA GCTA CTGG TGAGACCATTTATAC YE4112 4499404 - 4500513 + | hypothetical protein TERM 4906 4500856 - 4500890 + T 100 -8 -5.26155 | opp_overlap 4500856 GAATACCTCTGAATA CTGACTGAACAGTT ATTGGTA AACTATTCAGTCGG TTTTTATCTTTGTAT TERM 4907 4501213 - 4501203 - T 73 -8.2 -3.68183 | overlap 4501201 TGATACAGATAAATA CGCG GAG CGCG CGGGGAAATTGCCAG TERM 4908 4501805 - 4501825 + T 74 -4.6 -4.89562 | opp_overlap 4501798, overlap 4501806 TGAGCATAGCCTGAG TCGCCACC CGGGC GATGGCGG TTTTATTCATTTTGA YE4117 4504014 - 4502800 - | putative phage integrase TERM 4909 4503450 - 4503431 - G 79 -10.7 -3.53444 | opp_overlap 4503434 4503443, overlap 4503443 4503444 TTATGGGTTTGCAAA GCACCGG CTAAAT CCGGTGC CGGATTATATTCCGC YE4118 4505595 - 4504402 - | AraC family transcriptional regulator TERM 4910 4505663 - 4505636 - R 100 -12.9 -4.28067 | opp_overlap 4505636 GGAATAACAGACAAA GAGATCAATGC AGTATG GCATTGATCTC TTTTTGAAGATGGGA TERM 4911 4505636 - 4505663 + r 100 -12.9 -4.59773 | opp_overlap 4505636 GGAATAACAGACAAA GAGATCAATGC AGTATG GCATTGATCTC TTTTTGAAGATGGGA YE4119 4506863 - 4505679 - | sugar transport system permease protein YE4120 4508382 - 4506850 - | xylose transporter ATP-binding subunit TERM 4912 4508144 - 4508161 + g 73 -2 -5.09225 | overlap 4508146 ATCGCGATGCCTTTT TGTTCG GTTTCA CGAATA TTTTTTGCCTGAAGT xylF 4509470 - 4508475 - | D-xylose transporter subunit XylF TERM 4913 4510250 - 4510239 - g 72 -5.8 -4.40561 | TTGGCCGAAAAACAA GCCA GTAG TGGC GTAAAATTATTGTGG xylA 4509849 - 4511168 + | xylose isomerase YE4123A 4513595 - 4512828 - | putative fimbrial chaperone xylB 4511318 - 4512880 + | xylulose kinase YE4124 4513765 - 4514859 + | isochorismatase family hydrolase TERM 4914 4515753 - 4515711 - g 91 -12 -3.89614 | gap 1, opp_overlap 4515717 TTTAATCTGGAGAAA GCCGCA-CTGGCAGCCGGA TTTTCC TCCGGCCGTCAGCTTCGGC GCGCACAACAGCGTG YE4125 4514862 - 4515788 + | putative transcriptional regulator YE4126 4516773 - 4515781 - | hypothetical protein TERM 4915 4516537 - 4516525 - G 71 -6.9 -4.17762 | overlap 4516528 CACGCTGTAAAACAA CAGGC ATA GCCCG ATGCGGGTAAAATGC TERM 4916 4516742 - 4516725 - G 71 -9.1 -3.45023 | opp_overlap 4516724 TCATGACCACCATAA TGCAGGC AACG GCCCGCA GATTATCAATCCAGC TERM 4917 4517500 - 4517512 + G 73 -10.5 -3.20382 | GTTACTCGGGCCATT GGCGG GTG CCGCC TTGATCCATGTCGCC cmr 4517024 - 4518253 + | multidrug translocase TERM 4918 4518261 - 4518286 + T 100 -14.1 -3.85817 | CTGAGTAATGTTCTT TGCACTGGGGA AAAC TCTCCAGTGCA TTTATAACCGGAAAT YE4128 4519541 - 4518288 - | hypothetical protein TERM 4919 4518483 - 4518497 + g 74 -4.3 -4.9725 | GAATGTTGCAAAACT CATTG AATAC CAATG TTTTTCTCTCGCCAT YE4129 4519856 - 4519545 - | hypothetical protein TERM 4920 4519799 - 4519819 + g 83 -3.9 -5.50774 | overlap 4519802 TATCAGATTGTTTAA GTTTCTGCT GCT GGCGGATAC TTTTTATTTCTTCTG TERM 4921 4519965 - 4519908 - R 100 -16.9 -3.98649 | opp_overlap 4519912 4519912, overlap 4519909 4519958 CATAACACATAATAA TCGATGTATTTTATGATAAATACATGT TAAC AGATGTATTTATCATAAAATACATCAT TAAAAGTGTATTTAA TERM 4922 4519964 - 4519909 - R 100 -20.4 -2.98105 | opp_overlap 4519912 4519912, overlap 4519908 4519958 ATAACACATAATAAT CGATGTATTTTATGATAAATACATGT TAAC AGATGTATTTATCATAAAATACATCA TTAAAAGTGTATTTA TERM 4923 4519912 - 4519961 + r 100 -18.5 -2.7317 | opp_overlap 4519909 4519908 4519958, overlap 4519912 ACACATAATAATCGA TGTATTTTATGATAAATACATGT TAAC AGATGTATTTATCATAAAATACA TCATTAAAAGTGTAT selB 4521911 - 4520019 - | selenocysteinyl-tRNA-specific translation factor fdhA 4523296 - 4521908 - | selenocysteine synthase TERM 4924 4523001 - 4522987 - G 70 -10 -3.16881 | CAGTTACCGCAGCAA TAGCGG ATT CCGCTA AAGGTGCTCGCCCTA TERM 4925 4523164 - 4523180 + g 71 -6.5 -4.27316 | ATTCACGGGCTTCAG CCTGCAT CAA ACGCAGG TTTTCAGTTAACAAG fdhE 4524257 - 4523328 - | formate dehydrogenase accessory protein FdhE TERM 4926 4524203 - 4524176 - G 73 -7.6 -4.12942 | opp_overlap 4524177 4524180, overlap 4524180 TTAAATTCGCGAAAA GTAACGGCGGGA TATT CCCCGCCGTTGT ACCTTTTTCGCTCTG TERM 4927 4524177 - 4524202 + g 81 -12.6 -2.85763 | opp_overlap 4524176 4524180, overlap 4524180 TAAATTCGCGAAAAG TAACGGCGGG ATATTC CCCGCCGTTG TACCTTTTTCGCTCT TERM 4928 4524199 - 4524180 - G 90 -12.8 -3.67175 | opp_overlap 4524177 4524180, overlap 4524176 ATTCGCGAAAAGTAA CGGCGGGA TATT CCCCGCCG TTGTACCTTTTTCGC TERM 4929 4524180 - 4524199 + g 86 -12.1 -3.5616 | opp_overlap 4524180 4524176, overlap 4524177 ATTCGCGAAAAGTAA CGGCGGG ATATTC CCCGCCG TTGTACCTTTTTCGC fdoI 4524907 - 4524257 - | formate dehydrogenase-O subunit gamma TERM 4930 4524740 - 4524721 - G 74 -9.3 -3.69256 | AGGCAGCGAACATAA TCACCCC AGCGAA GGGGTGA AGGATGCGCGCCAAC fdoH 4525875 - 4524904 - | formate dehydrogenase-O, iron-sulfur subunit fdoG 4528935 - 4525888 - | formate dehydrogenase-o, major subunit TERM 4931 4527909 - 4527929 + g 77 -6.8 -4.58303 | opp_overlap 4527913 CAAAGCCGTTTTCAT CCAACTGG TAATT CCAGGTGG TTTTATCGTATTTGC TERM 4932 4529799 - 4529773 - g 76 -10.9 -3.14344 | gap 2, opp_overlap 4529767 4529772 4529771, overlap 4529760 CAGCCGTGGCAGCAA GGCGCGGTGCTGG TTT CCAGC-C-GCGCC AGTTATGAGATGGTG fdhD 4529146 - 4529973 + | formate dehydrogenase accessory protein TERM 4933 4530317 - 4530304 - g 71 -4.5 -4.62069 | GTTCCAGCTGAAAAA CGCAC CTTT ATGCG TAATAACGCCGGCGG sodA 4530100 - 4530723 + | superoxide dismutase TERM 4934 4530794 - 4530762 - f 74 -9.2 -3.38314 | opp_overlap 4530766, overlap 4530760 4530764 4530766 TTCAAGTTCGAAAGA TATATGCCAGCAAG GCCCT CTTGCTGGCATTTT TTATTGCTAAAGTTT TERM 4935 4530792 - 4530764 - f 89 -11.8 -3.25918 | opp_overlap 4530766, overlap 4530762 4530760 4530766 CAAGTTCGAAAGATA TATGCCAGCAAG GCCCT CTTGCTGGCATT TTTTATTGCTAAAGT TERM 4936 4530790 - 4530766 - f 100 -14.4 -3.18839 | opp_overlap 4530766, overlap 4530764 4530762 4530760 AGTTCGAAAGATATA TGCCAGCAAG GCCCT CTTGCTGGCA TTTTTTATTGCTAAA TERM 4937 4530766 - 4530790 + F 100 -15.1 -5.5112 | opp_overlap 4530766 4530764 4530762 4530760 AGTTCGAAAGATATA TGCCAGCAAGG CCC TCTTGCTGGCA TTTTTTATTGCTAAA TERM 4938 4531074 - 4531060 - f 75 -5.6 -4.72986 | overlap 4531062 GATTTGCAGCAAAAA CACCGT ACA ACGGAG AAGAACATGGCAGCA cheM 4531081 - 4533030 + | methyl-accepting chemotaxis protein II TERM 4939 4533051 - 4533068 + F 95 -12.7 -3.26722 | overlap 4533049 CGTTAAACCATGGAG CCCTGCC GTCA GGCAGGG TATTCTGAGTCTCCC YE4140 4533109 - 4533780 + | hypothetical protein YE4141 4534353 - 4533934 - | hypothetical protein YE4142 4534748 - 4534350 - | hypothetical protein TERM 4940 4534637 - 4534610 - G 71 -4.2 -4.72272 | gap 1, opp_overlap 4534592, overlap 4534612 TCGTGTCATTAAAAA CACTAGCATATGC TAA GCATATGTCAG-G AGTGGCGTCAGAGCT TERM 4941 4534636 - 4534612 - G 73 -7.9 -3.98256 | opp_overlap 4534592, overlap 4534610 GTGTCATTAAAAACA CTAGCATATGC TAA GCATATGTCAG GAGTGGCGTCAGAGC TERM 4942 4534694 - 4534659 - G 87 -6.8 -5.1287 | gap 1, opp_overlap 4534663, overlap 4534663 GTCAGAGCTAAAAAA CAAACCGGATG-GCGGC CAT GCCACACACCCGGTTAT TTCGAAAGTCGCAAT TERM 4943 4534690 - 4534663 - G 100 -12 -5.0666 | gap 1, opp_overlap 4534663, overlap 4534659 GAGCTAAAAAACAAA CCGGATG-GCGGC CAT GCCACACACCCGG TTATTTCGAAAGTCG TERM 4944 4534663 - 4534690 + g 70 -7.6 -3.91716 | gap 1, opp_overlap 4534663 4534659 GAGCTAAAAAACAAA CCGGATG-GCGGC CAT GCCACACACCCGG TTATTTCGAAAGTCG TERM 4945 4534799 - 4534773 - R 86 -10.1 -3.9749 | gap 1, overlap 4534774 AGGTAGAAGAGTAAA GCGTCCGCGCCA CGGA TGGCGCGG-CTC GAGCCCCCAGGGAAG TERM 4946 4534800 - 4534774 - R 73 -10.1 -2.97771 | gap 1, overlap 4534773 GGTAGAAGAGTAAAG CG-TCCGCGCCA CGGA TGGCGCGGCTCG AGCCCCCAGGGAAGG YE4143 4535235 - 4534879 - | hypothetical protein YE4144 4536809 - 4535328 - | putative transcriptional regulator TERM 4947 4536615 - 4536604 - G 88 -7.2 -5.07275 | CTACAGACATAAAAA CCCG ACTG CGGG CGCGCTTCAATCAGG TERM 4948 4536867 - 4536834 - H 78 -10.5 -3.24747 | TCTCCACAGGATCAA TGGGTACAGTTTA GTGTCATG CAAACTGTACCCA TAACAATAGATAACT YE4145 4536915 - 4537565 + | putative inner membrane protein mtlR 4538116 - 4537562 - | mannitol repressor protein TERM 4949 4538193 - 4538158 - R 100 -15.7 -4.1552 | opp_overlap 4538165, overlap 4538165 TATCGGGCTAACAAA GGATAAATACCGCGT AATCCG ACACGGTATTTATCC CCTAACGCAAACGCG TERM 4950 4538186 - 4538165 - R 71 -6.6 -4.20981 | opp_overlap 4538165, overlap 4538158 CTAACAAAGGATAAA TACCGCGT AATCCG ACACGGTA TTTATCCCCTAACGC mtlD 4539394 - 4538231 - | mannitol-1-phosphate 5-dehydrogenase TERM 4951 4539011 - 4538995 - G 71 -4.3 -4.77157 | opp_overlap 4538985 GCAAGGCAGCAAAAA CCTGCTG CTT CAACTGG CTGGTGCCACGCACC TERM 4952 4539013 - 4539027 + g 70 -10 -3.21276 | overlap 4539011 GCTGCTTCAACTGGC TGGTGC CAC GCACCA TATTCTCACAAGCAA TERM 4953 4539448 - 4539426 - R 78 -9.8 -3.53012 | opp_overlap 4539426 TGTGTGGCTGTGAAA GGGCCGCG TACTCCC CACGGCCC TATACTCGTCATACT mtlA 4541549 - 4539627 - | PTS system, mannitol-specific IIABC component TERM 4954 4540599 - 4540581 - G 81 -11 -3.65313 | opp_overlap 4540580 GAAGGACACGGCAAA TGCAGCAG CAA CCGCTGCA ATGTTGGCAAAGTAA TERM 4955 4541586 - 4541554 - R 71 -4.2 -4.89567 | GGTGAAAACATAAAA CACCCCTATTGGTA CGCGC TAACAATAAGAGCG CGATATAATTGTTTT TERM 4956 4542084 - 4542059 - R 100 -16.2 -2.52464 | TGCCGCCTCAACCGA GCAGGAGGGC AAGCCG GCCCTCCTGC ACCTGCGGCTTGCGC TERM 4957 4542288 - 4542263 - R 71 -4.2 -4.89567 | gap 1 GGTCAAAAGAGAAAA TCAAAACCATA GTCTT TA-GGTTTTGA AGTTTAAAAGCACAT TERM 4958 4542338 - 4542355 + r 71 -8.4 -3.57144 | ATGTAGCAAGGGGAA TCCGGC ATGGAC GCCGGA TTTAGGCGTCACGCG TERM 4959 4542468 - 4542489 + r 100 -12.3 -3.60792 | overlap 4542452 CGCGGGGGTTCCAAG GGGGTCACG CGCT TGTGACCCC TTTGGCGGTTGAGGC yiaF 4543288 - 4542569 - | hypothetical protein glyS 4545605 - 4543536 - | glycyl-tRNA synthetase subunit beta TERM 4960 4545046 - 4545036 - G 73 -8.2 -3.85817 | AGGTTCCCCCATAAA GCGG TGA CCGC GAATAATACGATCTG glyQ 4546529 - 4545615 - | glycyl-tRNA synthetase subunit alpha TERM 4961 4546048 - 4546058 + g 71 -8.2 -3.75153 | overlap 4546051 CCATAAGTTATTTCG CCGG TGA CCGG TTTACATTCCAAACC TERM 4962 4546963 - 4546948 - g 73 -2.5 -5.00884 | overlap 4546949 ACCGTGCTGAAAAAA CGCGA ACACTA TCGCA AATGCTTTCATAACT tag 4546786 - 4547358 + | DNA-3-methyladenine glycosylase TERM 4963 4547539 - 4547527 - g 71 -4.1 -4.71061 | overlap 4547528 ATTTACACTCAAAAA CCATC CGT GATGA GAGTCCGATTGCAGG YE4153 4547355 - 4547810 + | hypothetical protein YE4154 4547924 - 4549378 + | hypothetical protein TERM 4964 4549498 - 4549508 + G 80 -4 -5.31877 | opp_overlap 4549505 TTATAATTAAAATTT TAAC AAT GTTA TTTTTTATAATAACT YE4155 4549470 - 4551641 + | hypothetical protein yiaD 4551867 - 4552526 + | putative outer membrane lipoprotein TERM 4965 4552541 - 4552571 + T 84 -6.1 -5.00895 | overlap 4552542 ATTGTTACTATTTCC CTGCGGATGATGC CTCGC GCTTTATCCGCAC TTTTTCTATGGTCGC TERM 4966 4552542 - 4552570 + T 78 -9.6 -3.59814 | overlap 4552541 TTGTTACTATTTCCC TGCGGATGATGC CTCGC GCTTTATCCGCA CTTTTTCTATGGTCG YE4157 4553247 - 4552603 - | hypothetical protein YE4158 4553427 - 4554887 + | putative transport protein TERM 4967 4554897 - 4554922 + F 76 -6.8 -4.46615 | overlap 4554898 TTATAAAATCAGATG TGCCAACCTG CTCAGA CGGGTTGGCC TTTTCATTAGTCGTA TERM 4968 4554898 - 4554921 + F 78 -10.3 -3.27246 | overlap 4554897 TATAAAATCAGATGT GCCAACCTG CTCAGA CGGGTTGGC CTTTTCATTAGTCGT TERM 4969 4556119 - 4556104 - g 75 -6.1 -4.53303 | opp_overlap 4556103 CACCGTCACAGAAAA CTGCG TCAACC CGCAG GTATTGCAGCAAGCA YE4159 4555157 - 4556137 + | putative D-isomer specific 2-hydroxyacid dehydrogenase TERM 4970 4556782 - 4556797 + G 76 -8.2 -4.01135 | opp_overlap 4556782 TCACTCTGCAACCCA CTCCCG AGAG CGGGGG TTTACTGTTATTAGA TERM 4971 4558203 - 4558185 - g 73 -3.7 -4.85599 | opp_overlap 4558202, overlap 4558186 CTGAGCGGAGAAAAA GGCGCGC TGTTG GCGCACT GGCAAAAAGTCAGTC malS 4556286 - 4558352 + | periplasmic alpha-amylase precursor avtA 4558487 - 4559740 + | valine--pyruvate transaminase TERM 4972 4559783 - 4559759 - T 70 -2.8 -5.00851 | overlap 4559764 ACTAACGAAATAAAA GCATATCCAA AGTCA TTGGAGTTGC AGGTAAGCAGCCAGC yidE 4561544 - 4559886 - | hypothetical protein TERM 4973 4561714 - 4561683 - R 100 -16 -4.4767 | GGATGCACCACAAAA TGCACCGGAGAG TAGGGAAT CTCTCCGGTGCA AAAACAAACATGGAA TERM 4974 4561769 - 4561805 + r 81 -11.6 -2.81702 | overlap 4561766 CAAGGAGAGGGGTAT TCGTTACCGGCACCTC AGGCA GAGGTGCCGGTCATCA TAATTACTGCTGTTC hslS 4562282 - 4561809 - | heat shock chaperone IbpB TERM 4975 4562031 - 4562045 + g 75 -5.7 -4.57837 | overlap 4562024 CACCAAGCCTTGATG CAGGT ATTCA ACCTG TTTTTCAGCCGGTGT hslT 4562820 - 4562407 - | heat shock protein IbpA TERM 4976 4562667 - 4562683 + g 71 -6.5 -4.25256 | overlap 4562670 CAAAGCCTGCTACCG CGATCGC GAT GCGATAG TTATTTTCATCGACC TERM 4977 4562995 - 4562984 - H 95 -3 -6.07969 | CAAAATCAAAAAAAA TTTC ACAA GAAA AATCTTAATAAGAAG TERM 4978 4563008 - 4562998 - H 78 -4 -5.19328 | opp_overlap 4562998 4563000 4563007, overlap 4563000 ATTTCACAAGAAAAA TCTT AAT AAGA AGTTTATTAATTTCA YE4165 4563203 - 4563541 + | hypothetical protein YE4166 4564844 - 4563543 - | hypothetical protein TERM 4979 4564807 - 4564829 + g 71 -4.1 -4.75308 | GGTTCAAAGGTGAGT TGCTGTTCC TGTGT GGAATCGCA TTTTTGCATGTTCAT TERM 4980 4564893 - 4564917 + H 100 -12.3 -3.48924 | opp_overlap 4564893 CGTTTTTTTACTAAA TCTGTATGTCA TTA TGGCATACAGA TTGTCTGAGGGCTGC TERM 4981 4564917 - 4564893 - H 80 -10.1 -3.72576 | opp_overlap 4564893 CGTTTTTTTACTAAA TCTGTATGTCA TTA TGGCATACAGA TTGTCTGAGGGCTGC TERM 4982 4564922 - 4564938 + H 79 -7.9 -4.33819 | TGGCATACAGATTGT CTGAGGG CTG CCCGCAG TTTGTTGTAAGTAAT TERM 4983 4565845 - 4565817 - g 72 -10.1 -3.09516 | CGCTGGATGATTGAA GGTGCCGCCGGTG TAG CTCTGGCGGCAGC ACTAAAACAGGCACC YE4167 4564986 - 4565945 + | hypothetical protein YE4168 4565942 - 4566880 + | ornithine cyclodeaminase TERM 4984 4566952 - 4566973 + T 84 -10.9 -3.60792 | opp_overlap 4566946 AAGAATGGAGCCAGG GGGGTTACG CGCT TGTAACCCC TTTAGCGGTTGAGGC YE4169 4567848 - 4567039 - | sugar phosphatase TERM 4985 4567954 - 4567990 + r 95 -13.2 -2.95298 | gap 1, opp_overlap 4567959, overlap 4567959 GCCATGATGAGACAA AAAAAGCCCAGTAGCAG TTTC CTGCT-CTGGGCTTTTC TATCTGATCAATAAG TERM 4986 4567959 - 4567985 + r 100 -13.1 -4.62984 | gap 1, opp_overlap 4567959, overlap 4567954 GATGAGACAAAAAAA GCCCAGTAGCAG TTTC CTGCT-CTGGGC TTTTCTATCTGATCA TERM 4987 4567985 - 4567959 - R 100 -13.1 -5.74122 | gap 1, opp_overlap 4567959 4567954 GATGAGACAAAAAAA GCCCAGTAGCAG TTTC CTGCT-CTGGGC TTTTCTATCTGATCA gyrB 4570432 - 4568018 - | DNA gyrase subunit B recF 4571537 - 4570452 - | recombination protein F TERM 4988 4570569 - 4570559 - G 70 -2.4 -4.87665 | CTGCACTGACAAAAA CCTG TGC CTGG GTAGCTTTTAAACGC TERM 4989 4571040 - 4571058 + g 80 -12.4 -2.77007 | overlap 4571042 ATAGCGACTCACCTG GCGCAGCG CGG CGTTGCGC TGCTTAAGTAATCTT TERM 4990 4571042 - 4571061 + g 79 -11.4 -3.15961 | overlap 4571040 AGCGACTCACCTGGC GCAGCGCG GCGT TGCGCTGC TTAAGTAATCTTTTC TERM 4991 4571356 - 4571337 - G 71 -6.4 -4.22009 | ACCATGCAACACAAA TTCGGCAC ATTC GTGACGAA TCACGCGGCCTGCCT dnaN 4572800 - 4571700 - | DNA polymerase III subunit beta dnaA 4574193 - 4572805 - | chromosomal replication initiation protein YE4174 4574542 - 4574862 + | hypothetical protein TERM 4992 4574856 - 4574870 + F 75 -7.2 -4.29139 | AGCAGCCAAACGCGT TTACTG AAT CAGTAA TTATTTTAAGTTTAG rpmH 4574898 - 4575038 + | 50S ribosomal protein L34 rnpA 4575057 - 4575416 + | ribonuclease P TERM 4993 4575417 - 4575455 + F 95 -13.2 -3.02043 | overlap 4575426 4575453 GCTCCCGCATCCTGA TCGGGCTAATCAGGGGCT ATC AGCTCGTGATTAGTCCGC TGTTGGGGCCGCGTT TERM 4994 4575801 - 4575785 - g 71 -9.3 -3.6053 | CCGGTGATAAAGCAA GCCAGGC CGT GCCAGGC AGTGGTCAGGGTCAA yidC 4575640 - 4577286 + | putative inner membrane protein translocase component YidC TERM 4995 4577358 - 4577327 - f 100 -15.2 -2.95448 | opp_overlap 4577336, overlap 4577317 4577332 AGTAACAGCTAGATA CCCAAGCCACTGGC ATAC GTCAGTGACTTGGG AGAGCAGCTAACAAC TERM 4996 4577401 - 4577430 + F 100 -15.9 -4.17048 | opp_overlap 4577395 4577404, overlap 4577404 AATACGAAGGGTATA TGAGGCGGTCATA ATTA TATGACCGCCTTA TTCTTTTAAAGAGAG TERM 4997 4577404 - 4577427 + F 100 -15.4 -4.20868 | opp_overlap 4577395 4577404, overlap 4577401 ACGAAGGGTATATGA GGCGGTCATA ATTA TATGACCGCC TTATTCTTTTAAAGA TERM 4998 4577427 - 4577404 - f 100 -15.4 -2.64973 | opp_overlap 4577404 4577401, overlap 4577395 ACGAAGGGTATATGA GGCGGTCATA ATTA TATGACCGCC TTATTCTTTTAAAGA trmE 4577454 - 4578818 + | tRNA modification GTPase TrmE TERM 4999 4578952 - 4578939 - g 75 -5.9 -4.4891 | opp_overlap 4578934 4578939 TCCATGATTATAAAA CCACG TGTA CGCGG CTTTATCTGTGTGAC YE4179 4578927 - 4580126 + | trans-2-enoyl-CoA reductase TERM 5000 4580146 - 4580174 + F 100 -14.7 -3.30443 | opp_overlap 4580149, overlap 4580149 AGGTTTATATCGCAA CAACCCACTGTGT ATG ATGCAGTGGGTTG TTAATCTACTGATCG TERM 5001 4580149 - 4580171 + F 86 -10.6 -3.78778 | opp_overlap 4580149, overlap 4580146 TTTATATCGCAACAA CCCACTGTGT ATG ATGCAGTGGG TTGTTAATCTACTGA YE4180 4580352 - 4581167 + | hypothetical protein TERM 5002 4581958 - 4581943 - g 75 -6.2 -4.6526 | AGAAAGCGTGAAAAA GCTATT GAAT AATAGC CATACCGGTCGTCAA YE4181 4581179 - 4582195 + | ABC transporter YE4182 4582192 - 4582857 + | ABC transporter permease TERM 5003 4582994 - 4583026 + T 100 -10.7 -5.0538 | opp_overlap 4582981 GACTTAGCCAGCAGC CTTAACCCCTTCTGA TAT TCAAAAGGGATTAAG TTTTTTGGCATAACA TERM 5004 4583127 - 4583094 - T 100 -16.9 -3.551 | opp_overlap 4583095, overlap 4583095 CGGCAAGCGAGATAA TCCCGAATCACTTAC ATAA GTAAGTGATTCGGGT TATTGAGCGTAGCCA TERM 5005 4583126 - 4583095 - T 100 -20.4 -2.72739 | opp_overlap 4583095, overlap 4583094 GGCAAGCGAGATAAT CCCGAATCACTTAC ATAA GTAAGTGATTCGGG TTATTGAGCGTAGCC TERM 5006 4583095 - 4583126 + T 100 -20.4 -3.63515 | opp_overlap 4583095 4583094 GGCAAGCGAGATAAT CCCGAATCACTTAC ATAA GTAAGTGATTCGGG TTATTGAGCGTAGCC YE4183 4585136 - 4583178 - | putative methyl-accepting chemotaxis receptor protein TERM 5007 4583886 - 4583864 - G 72 -10.6 -2.93393 | opp_overlap 4583869, overlap 4583863 TGCGAGCGGATAAAT CCAGATTGCC GCT GGCAATTTGG CGCGATGCCGACGCG TERM 5008 4584328 - 4584366 + g 76 -2.4 -5.33848 | gap 1, overlap 4584363 AGCAGCCGCTGTGTT TCTG-CCGCCATTGGTG AGCTGG CAGCAAAGTCGGACAGA TTTTTTAATTCTGCT TERM 5009 4585023 - 4584995 - G 85 -7.6 -4.82901 | gap 1 GTGGTGTCACAAAAA GCTGAATAACCAC CACG GTGATTAT-CAGC AAGAAAATGAAAAAC ssuE 4585342 - 4585914 + | putative NAD(P)H-dependent FMN reductase TERM 5010 4585957 - 4585933 - f 73 -5.6 -4.42788 | opp_overlap 4585933 4585954 TCGAAGGTTACAAAA CCCCCATGAC ATGCG GTATTGGGGG TTTCCTCTGTATCGC YE4185 4586022 - 4587371 + | two-component sensor kinase YE4186 4587397 - 4587948 + | two-component response regulator YE4187 4588307 - 4588798 + | hypothetical protein TERM 5011 4588816 - 4588845 + T 100 -14.3 -3.82208 | opp_overlap 4588816, overlap 4588808 CGATATTCAATAAAA CGGCCCACTTTCA ATAC TGAGAGCGGGCCG TTTCGCTATTTGCTA TERM 5012 4588845 - 4588816 - T 100 -14.3 -4.70169 | opp_overlap 4588816 4588808 CGATATTCAATAAAA CGGCCCACTTTCA ATAC TGAGAGCGGGCCG TTTCGCTATTTGCTA yieG 4590212 - 4588884 - | xanthine/uracil permease family protein TERM 5013 4590355 - 4590368 + H 70 -3.9 -4.85545 | overlap 4590365 ATTAGCCATTTCTCA TTCAA CTTA TTGAA TTTTATTCATTTGAT YE4189 4590482 - 4591150 + | 6-phosphogluconate phosphatase TERM 5014 4591145 - 4591127 - T 81 -11 -3.35046 | opp_overlap 4591126, overlap 4591125 4591140 TTATGGCGTGAAAGA GGCTGGCA GAT TACCAGCC ATTAACTTGCTGGCA YE4190 4591902 - 4591147 - | putative amino acid transport system permease TERM 5015 4591183 - 4591205 + g 73 -7.7 -4.09805 | CTTATTTTGCCACCA GCGCCATGA CCGTT TAATGGCGC TTTGCTTGTTAATAG YE4191 4592641 - 4591904 - | ABC transporter permease YE4193 4593725 - 4592871 - | putative periplasmic solute-binding protein TERM 5016 4594882 - 4594856 - g 73 -10.2 -3.13163 | overlap 4594854 CAGCATTAATAGAGA TGGCAGACTTAG TGA CTAAATCAGCCA AGATTAATAACAAGA YE4194 4594015 - 4595205 + | tyrosine phosphatase YE4195 4595275 - 4595613 + | hypothetical protein TERM 5017 4595684 - 4595642 - T 73 -5.8 -4.57073 | gap 1, opp_overlap 4595633, overlap 4595643 4595681 TATTTGCCTGAAAAA CGGGTTAGTGATCGGAT GGCGATAATA ATC-GATCACTAACCCC AATCAAGCATAAATA TERM 5018 4595683 - 4595643 - T 74 -9.3 -3.33922 | gap 1, opp_overlap 4595633, overlap 4595642 4595681 ATTTGCCTGAAAAAC GGGTTAGTGATCGGAT GGCGATAATA ATC-GATCACTAACCC CAATCAAGCATAAAT nmpA 4596446 - 4595724 - | transcriptional regulator PhoU phoT 4597392 - 4596616 - | phosphate transporter subunit pstA 4598381 - 4597494 - | phosphate transporter permease subunit pstC 4599339 - 4598383 - | phosphate transporter permease subunit phoS 4600564 - 4599524 - | phosphate transporter subunit TERM 5019 4599679 - 4599692 + g 89 -3.7 -5.66989 | overlap 4599680 ACTTCAATACTTCAG CGCCG TTAG CGGCA TTTTTTTGCTCTTTA TERM 5020 4599680 - 4599691 + g 71 -7.2 -3.97753 | overlap 4599679 CTTCAATACTTCAGC GCCG TTAG CGGC ATTTTTTTGCTCTTT YE4202 4600837 - 4601199 + | hypothetical protein TERM 5021 4601286 - 4601236 - T 95 -7.8 -5.05301 | opp_overlap 4601244 4601248, overlap 4601244 4601248 AAATAATTATAAAAA TCATTAAATAAATAGCCTGCCATT ATT AATGGTAGGCTATTTATTATATAT CAATACAGATTAAAT TERM 5022 4601278 - 4601244 - T 100 -16 -3.97241 | opp_overlap 4601244 4601248, overlap 4601236 4601248 ATAAAAATCATTAAA TAAATAGCCTGCCATT ATT AATGGTAGGCTATTTA TTATATATCAATACA TERM 5023 4601244 - 4601278 + T 100 -18.2 -3.60525 | opp_overlap 4601244 4601236 4601248, overlap 4601248 ATAAAAATCATTAAA TAAATAGCCTGCCATT ATT AATGGTAGGCTATTTA TTATATATCAATACA TERM 5024 4601274 - 4601248 - T 100 -12.4 -4.54253 | opp_overlap 4601244 4601248, overlap 4601244 4601236 AAATCATTAAATAAA TAGCCTGCCATT ATT AATGGTAGGCTA TTTATTATATATCAA TERM 5025 4601248 - 4601274 + T 100 -14.6 -4.42974 | opp_overlap 4601248 4601244 4601236, overlap 4601244 AAATCATTAAATAAA TAGCCTGCCATT ATT AATGGTAGGCTA TTTATTATATATCAA glmS 4603151 - 4601322 - | D-fructose-6-phosphate amidotransferase glmU 4604728 - 4603358 - | bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase TERM 5026 4604154 - 4604144 - G 73 -5.4 -4.52857 | ATCGGTGATATAAAA CTCA CCT TGAG CATTATTGTTATTCA TERM 5027 4605103 - 4605079 - R 100 -11.5 -5.86332 | opp_overlap 4605079 TGAAGGTAAAAAAAA TGCCAATCAGC TTT ACTGACTGGCA TTCTATCGTTCTTTA TERM 5028 4605079 - 4605103 + r 73 -8.6 -3.66438 | opp_overlap 4605079 TGAAGGTAAAAAAAA TGCCAATCAG CTTTA CTGACTGGCA TTCTATCGTTCTTTA atpC 4605665 - 4605243 - | F0F1 ATP synthase subunit epsilon atpD 4607069 - 4605687 - | F0F1 ATP synthase subunit beta atpG 4608089 - 4607226 - | F0F1 ATP synthase subunit gamma atpA 4609692 - 4608151 - | F0F1 ATP synthase subunit alpha atpH 4610240 - 4609707 - | F0F1 ATP synthase subunit delta atpF 4610725 - 4610255 - | F0F1 ATP synthase subunit B atpE 4611025 - 4610786 - | F0F1 ATP synthase subunit C atpB 4612024 - 4611200 - | F0F1 ATP synthase subunit A TERM 5029 4611863 - 4611852 - G 70 -2.2 -4.95487 | AAAACAAACAGAAAA GCTA ACCC CAGC ACGACAGAGAAGAAC atpI 4612463 - 4612080 - | F0F1 ATP synthase subunit I gidB 4613751 - 4613131 - | glucose-inhibited division protein B TERM 5030 4613731 - 4613714 - G 76 -11.3 -3.14878 | opp_overlap 4613711 4613709, overlap 4613712 TCGGGTAACTCAATA CCTGCTG CACT CAGCAGG GAATCTAATTTTTTT TERM 5031 4613884 - 4613859 - R 71 -9.7 -2.70932 | opp_overlap 4613849 4613846 4613856 4613855 TTGTGGCCTGAATTA CCGGGCTGC TTATTCTT GCAACCCGG CAAATGTTTGATGGT gidA 4615788 - 4613899 - | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA